BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 014452
(424 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|225443339|ref|XP_002264125.1| PREDICTED: KH domain-containing protein At4g18375 [Vitis vinifera]
gi|297735779|emb|CBI18466.3| unnamed protein product [Vitis vinifera]
Length = 704
Score = 551 bits (1421), Expect = e-154, Method: Compositional matrix adjust.
Identities = 283/426 (66%), Positives = 330/426 (77%), Gaps = 10/426 (2%)
Query: 2 VVQGNPYPPAAEPFHQRGYA-----PGYHSRGYSSGPGHETVGGRNRMFYEEEVVFKLLC 56
++ GN P + F QRGY P YHSRGYSS PG E +G +RM EEEVVFKLLC
Sbjct: 275 MLHGNGMPGQLDSFPQRGYGSSLHGPDYHSRGYSSMPGPENIGANHRMVLEEEVVFKLLC 334
Query: 57 HLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMRHSPAQDAV 116
H +KVGSLIGKGGSI+R Q+ETGASIKIAD PDS+ER+VVISAREN E +HSPAQDAV
Sbjct: 335 HFEKVGSLIGKGGSIIRFLQSETGASIKIADAAPDSDERVVVISARENLEQKHSPAQDAV 394
Query: 117 MRVHSRIAEIGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAP 176
+RVH RIAEIGFEPG AVVARLLVHSQQIGCLLG+GG I+SEMRRATGASIR+F K+Q P
Sbjct: 395 IRVHCRIAEIGFEPGAAVVARLLVHSQQIGCLLGKGGIIISEMRRATGASIRIFAKEQVP 454
Query: 177 RCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKRPGPN-NGHSYLPPFPEMPPPP 235
+CGS +DE+VQVIG+ SVQDALF ITSR+RETIFP+K N NG Y+ FPE+PPP
Sbjct: 455 KCGSQNDELVQVIGSLQSVQDALFRITSRIRETIFPLKPSISNVNGPPYMSSFPEIPPPM 514
Query: 236 FRPRHNPASPGSYPSPVGPFHSMDRGMGPSQPFDHQAAFSHGMDPMVPPNSDRIPFPYGS 295
FRPRH+PASPG Y SPVG H +DR P P DHQ++FSHG+D + P N DR P+PYG
Sbjct: 515 FRPRHDPASPGHYSSPVGVPHGIDRSAVPGHPLDHQSSFSHGVDRIGPSNLDRAPYPYGG 574
Query: 296 ERPGHGPTFDRP-PSPRSWTPQGVGGGDPRGFDASSG-FTPRNRPVESGNHAAILTSTTI 353
+RPGHGP FDRP SPR WT QGV G+ RG D SG RN P SG+ A +T+TT+
Sbjct: 575 DRPGHGPPFDRPSSSPRMWT-QGV-SGNLRGTDVGSGSLASRNGPPGSGSQAPNITTTTV 632
Query: 354 EVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATEGVVMVSGTSDQMRAAQSL 413
EV +PQ ++HVYGENNSNL+ IRQISGA VV+ DP+ G++EGVV+VSGT DQ RAAQSL
Sbjct: 633 EVAVPQALLSHVYGENNSNLNQIRQISGARVVIQDPRTGSSEGVVVVSGTPDQTRAAQSL 692
Query: 414 IHAFIL 419
+ AFIL
Sbjct: 693 VQAFIL 698
Score = 131 bits (330), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 75/204 (36%), Positives = 112/204 (54%), Gaps = 43/204 (21%)
Query: 49 EVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVI------SAR 102
+V+F++LC K G +IGKGG+I+R F+ +TGA I+I D + +ER+++I S R
Sbjct: 55 QVLFRILCPATKTGGVIGKGGAIIRQFREDTGAKIRIDDSVLGCDERVILIVADAVKSKR 114
Query: 103 ENSEM---------------------------RHSPAQDAVMRVHSRIAEIGFEPGQ--- 132
E S + SPAQ A++RV RI ++ E +
Sbjct: 115 EASAICGAEANDGEESANLSNSSPNPVAVDDDESSPAQQALVRVFERILKVDEEREEKEK 174
Query: 133 -------AVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAPRCGSPHDEI 185
AV RLL S Q+GC+LGRGG IV ++R+ +GA IRV PKD P C SP DE+
Sbjct: 175 KEDLGNVAVCCRLLAPSNQVGCVLGRGGKIVEKIRQESGAQIRVLPKDHIPACASPGDEL 234
Query: 186 VQVIGNYHSVQDALFHITSRLRET 209
+Q+ G + +V+ AL ++S L++
Sbjct: 235 IQITGTFPAVRKALLLVSSCLQDN 258
>gi|147863214|emb|CAN78372.1| hypothetical protein VITISV_006585 [Vitis vinifera]
Length = 807
Score = 550 bits (1418), Expect = e-154, Method: Compositional matrix adjust.
Identities = 283/431 (65%), Positives = 330/431 (76%), Gaps = 14/431 (3%)
Query: 2 VVQGNPYPPAAEPFHQRGYA-----PGYHSRGYSSGPGHETVGGRNRMFYEEEVVFKLLC 56
++ GN P + F QRGY P YHSRGYSS PG E +G +RM EEEVVFKLLC
Sbjct: 371 MLHGNGMPGQLDSFPQRGYGSSLHGPDYHSRGYSSMPGPENIGANHRMVLEEEVVFKLLC 430
Query: 57 HLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARE-----NSEMRHSP 111
H +KVGSLIGKGGSI+R Q+ETGASIKIAD PDS+ER+VVISARE N E +HSP
Sbjct: 431 HFEKVGSLIGKGGSIIRXLQSETGASIKIADAAPDSDERVVVISAREACTLTNXEQKHSP 490
Query: 112 AQDAVMRVHSRIAEIGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFP 171
AQDAV+RVH RIAEIGFEPG AVVARLLVHSQQIGCLLG+GG I+SEMRRATGASIR+F
Sbjct: 491 AQDAVIRVHCRIAEIGFEPGAAVVARLLVHSQQIGCLLGKGGIIISEMRRATGASIRIFA 550
Query: 172 KDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKRPGPN-NGHSYLPPFPE 230
K+Q P+CGS +DE+VQVIG+ SVQDALF ITSR+RETIFP+K N NG Y+ FPE
Sbjct: 551 KEQVPKCGSQNDELVQVIGSLQSVQDALFCITSRIRETIFPLKPSISNVNGPPYMSSFPE 610
Query: 231 MPPPPFRPRHNPASPGSYPSPVGPFHSMDRGMGPSQPFDHQAAFSHGMDPMVPPNSDRIP 290
+PPP FRPRH+PASPG Y SPVG H +DR P P DHQ++FSHG+D + P N DR P
Sbjct: 611 IPPPMFRPRHDPASPGHYSSPVGVPHGIDRSAVPGHPLDHQSSFSHGVDRIGPSNLDRAP 670
Query: 291 FPYGSERPGHGPTFDRP-PSPRSWTPQGVGGGDPRGFDA-SSGFTPRNRPVESGNHAAIL 348
+PYG +RPGHGP FDRP SPR WTPQGV G+ RG D S G R+ P SG+ A +
Sbjct: 671 YPYGGDRPGHGPPFDRPSSSPRMWTPQGV-SGNLRGTDVGSGGLASRSGPPGSGSQAPNI 729
Query: 349 TSTTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATEGVVMVSGTSDQMR 408
T TT+EV +PQ ++HVYGENNSNL+ IRQISGA VV+ DP+ G++EGVV+VSGT DQ R
Sbjct: 730 TXTTVEVAVPQALLSHVYGENNSNLNQIRQISGARVVIQDPRTGSSEGVVVVSGTPDQTR 789
Query: 409 AAQSLIHAFIL 419
AAQSL+ AFIL
Sbjct: 790 AAQSLVQAFIL 800
Score = 117 bits (294), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 69/182 (37%), Positives = 98/182 (53%), Gaps = 43/182 (23%)
Query: 49 EVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVI------SAR 102
+V+F++LC K G +IGKGG+I+R F+ +TGA I+I D + +ER+++I S R
Sbjct: 55 QVLFRILCPATKTGGVIGKGGAIIRQFREDTGAKIRIDDSVLGCDERVILIVADAVKSKR 114
Query: 103 ENSEM---------------------------RHSPAQDAVMRVHSRIAEIGFEPGQ--- 132
E S + SPAQ A++RV RI ++ E +
Sbjct: 115 EASAICGAEANDGEESANLSNSSPNPVAVDDDESSPAQQALVRVFERILKVDEEREEKEK 174
Query: 133 -------AVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAPRCGSPHDEI 185
AV RLL S Q+GC+LGRGG IV ++R+ +GA IRV PKD P C SP DE+
Sbjct: 175 KEDLGNVAVCCRLLAPSNQVGCVLGRGGKIVEKIRQESGAQIRVLPKDHIPACASPGDEL 234
Query: 186 VQ 187
+Q
Sbjct: 235 IQ 236
>gi|449492545|ref|XP_004159029.1| PREDICTED: KH domain-containing protein At4g18375-like [Cucumis
sativus]
Length = 716
Score = 427 bits (1097), Expect = e-117, Method: Compositional matrix adjust.
Identities = 233/402 (57%), Positives = 282/402 (70%), Gaps = 7/402 (1%)
Query: 24 YHSRGYSSGPGHETVGGRNRMFYEEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASI 83
Y SR YSS PGHE G R EE+VVF+LLC DKVGSLIGKGG++VR QNETGASI
Sbjct: 318 YRSRSYSSIPGHENAGAGPRAAMEEDVVFRLLCQPDKVGSLIGKGGTVVRALQNETGASI 377
Query: 84 KIADILPDSEERIVVISARENSEMRHSPAQDAVMRVHSRIAEIGFEPGQAVVARLLVHSQ 143
KI D PD +ER+VVISARE E +SPAQ+AV+R H RIAEIG+EPG AVVARLLVH Q
Sbjct: 378 KIVDT-PDLDERLVVISARETLEQTYSPAQEAVIRAHCRIAEIGYEPGAAVVARLLVHGQ 436
Query: 144 QIGCLLGRGGHIVSEMRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHIT 203
QIG L+GRGGHI+++MRR TG SI++FP+DQ G DE+VQVIGN SVQDALFHIT
Sbjct: 437 QIGYLVGRGGHIINDMRRGTGTSIQIFPRDQIQNGGPMSDEVVQVIGNLPSVQDALFHIT 496
Query: 204 SRLRETIFPMK--RPGPNNGHSYLPPFPEMPPPPFRPRHNPASPGSYPSPVGPFHSMDRG 261
+R+R+T FPM+ P NN YL P PE PPP FRP N SPG YPS G +R
Sbjct: 497 NRIRDTFFPMRPHVPNFNNHPPYLSPHPETPPPLFRPGSNAHSPGYYPSQAGGLRGTERP 556
Query: 262 MGPSQPFDHQAAFSHGMDPMVPPNSDRIPFPYGSERPGHGPTFDRPPSPRSWTPQGVGGG 321
S P DHQ A+ H + N D +P+P+G ERPG G +F+R PSPRSWT Q V
Sbjct: 557 PYHSHPLDHQPAYPHNVSFGGGNNMDGVPYPHGMERPGPG-SFER-PSPRSWTSQ-VSSE 613
Query: 322 DPRGFDASSGFTPRNRPVESGNHAAILTSTTIEVVIPQLYMAHVYGENNSNLSHIRQISG 381
P+G G RN P SG + T++E+VIPQ + H+YGENN+N++H++QISG
Sbjct: 614 IPKGPTDGFGMVSRNEPYGSGG-PHFMGGTSMEMVIPQTLICHIYGENNNNIAHVQQISG 672
Query: 382 ANVVVNDPKPGATEGVVMVSGTSDQMRAAQSLIHAFILCGVT 423
A +VV+D KPG +G V++SGT DQ+RAAQ L+HAFILCG T
Sbjct: 673 AMLVVHDAKPGMFDGKVIMSGTPDQIRAAQRLVHAFILCGKT 714
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 100/215 (46%), Gaps = 61/215 (28%)
Query: 49 EVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISA------- 101
+ +F+LLC KV S I+R ++ GA I + + LP EE ++VI A
Sbjct: 67 DTLFRLLCPASKVSS-------ILRHLRDIPGARIHVDEPLPSCEECVLVILAGSPSKPT 119
Query: 102 ----------RENSEMRH-------------SPAQDAVMRVHSRIAEIGFEPGQ------ 132
RE+ R+ S AQ A++R I + + G+
Sbjct: 120 HTNPGNDREFREHDVHRNVSSDTVAGDSDERSQAQQALLRTFESIVRMNEDSGENQEIQK 179
Query: 133 ------------------AVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQ 174
VV RLL S Q+G +LGRGG V ++R+ + A +++FPKDQ
Sbjct: 180 KNADSAPNDRISGGETDGLVVCRLLAPSHQVGRVLGRGGKTVEKIRQESMAHVKIFPKDQ 239
Query: 175 APRCGSPHDEIVQVIGNYHSVQDALFHITSRLRET 209
P C SP DE++Q+ GN+ +V AL ++S L+++
Sbjct: 240 NPACASPQDELIQISGNFSAVMKALSSVSSCLQDS 274
>gi|449448150|ref|XP_004141829.1| PREDICTED: KH domain-containing protein At4g18375-like [Cucumis
sativus]
Length = 716
Score = 427 bits (1097), Expect = e-117, Method: Compositional matrix adjust.
Identities = 233/402 (57%), Positives = 282/402 (70%), Gaps = 7/402 (1%)
Query: 24 YHSRGYSSGPGHETVGGRNRMFYEEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASI 83
Y SR YSS PGHE G R EE+VVF+LLC DKVGSLIGKGG++VR QNETGASI
Sbjct: 318 YRSRSYSSIPGHENAGAGPRAAMEEDVVFRLLCQPDKVGSLIGKGGTVVRALQNETGASI 377
Query: 84 KIADILPDSEERIVVISARENSEMRHSPAQDAVMRVHSRIAEIGFEPGQAVVARLLVHSQ 143
KI D PD +ER+VVISARE E +SPAQ+AV+R H RIAEIG+EPG AVVARLLVH Q
Sbjct: 378 KIVDT-PDLDERLVVISARETLEQTYSPAQEAVIRAHCRIAEIGYEPGAAVVARLLVHGQ 436
Query: 144 QIGCLLGRGGHIVSEMRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHIT 203
QIG L+GRGGHI+++MRR TG SI++FP+DQ G DE+VQVIGN SVQDALFHIT
Sbjct: 437 QIGYLVGRGGHIINDMRRGTGTSIQIFPRDQIQNGGPMSDEVVQVIGNLPSVQDALFHIT 496
Query: 204 SRLRETIFPMK--RPGPNNGHSYLPPFPEMPPPPFRPRHNPASPGSYPSPVGPFHSMDRG 261
+R+R+T FPM+ P NN YL P PE PPP FRP N SPG YPS G +R
Sbjct: 497 NRIRDTFFPMRPHVPNFNNHPPYLSPHPETPPPLFRPGSNAHSPGYYPSQAGGLRGTERP 556
Query: 262 MGPSQPFDHQAAFSHGMDPMVPPNSDRIPFPYGSERPGHGPTFDRPPSPRSWTPQGVGGG 321
S P DHQ A+ H + N D +P+P+G ERPG G +F+R PSPRSWT Q V
Sbjct: 557 PYHSHPLDHQPAYPHNVSFGGGNNMDGVPYPHGMERPGPG-SFER-PSPRSWTSQ-VSSE 613
Query: 322 DPRGFDASSGFTPRNRPVESGNHAAILTSTTIEVVIPQLYMAHVYGENNSNLSHIRQISG 381
P+G G RN P SG + T++E+VIPQ + H+YGENN+N++H++QISG
Sbjct: 614 IPKGPTDGFGMVSRNEPYGSGG-PHFMGGTSMEMVIPQTLICHIYGENNNNIAHVQQISG 672
Query: 382 ANVVVNDPKPGATEGVVMVSGTSDQMRAAQSLIHAFILCGVT 423
A +VV+D KPG +G V++SGT DQ+RAAQ L+HAFILCG T
Sbjct: 673 AMLVVHDAKPGMFDGKVIMSGTPDQIRAAQRLVHAFILCGKT 714
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 100/215 (46%), Gaps = 61/215 (28%)
Query: 49 EVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISA------- 101
+ +F+LLC KV S I+R ++ GA I + + LP EE ++VI A
Sbjct: 67 DTLFRLLCPASKVSS-------ILRHLRDIPGARIHVDEPLPSCEECVLVILAGSPSKPA 119
Query: 102 ----------RENSEMRH-------------SPAQDAVMRVHSRIAEIGFEPGQ------ 132
RE+ R+ S AQ A++R I + + G+
Sbjct: 120 HTNPGNDREFREHDVHRNVSSDTVAGDSDERSQAQQALLRTFESIVRMNEDSGENQEIQK 179
Query: 133 ------------------AVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQ 174
VV RLL S Q+G +LGRGG V ++R+ + A +++FPKDQ
Sbjct: 180 KNADSAPNDRISGGETDGLVVCRLLAPSHQVGRVLGRGGKTVEKIRQESMAHVKIFPKDQ 239
Query: 175 APRCGSPHDEIVQVIGNYHSVQDALFHITSRLRET 209
P C SP DE++Q+ GN+ +V AL ++S L+++
Sbjct: 240 NPACASPQDELIQISGNFSAVMKALSSVSSCLQDS 274
>gi|356526304|ref|XP_003531758.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K-like [Glycine
max]
Length = 565
Score = 408 bits (1048), Expect = e-111, Method: Compositional matrix adjust.
Identities = 240/406 (59%), Positives = 287/406 (70%), Gaps = 21/406 (5%)
Query: 22 PGYHSRG-YSSGPGHETVGGRNRMFYEEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETG 80
P +HSRG YS GH + +RMF EEEVVFKLLC DKVGSLIGKGGS+VR QNETG
Sbjct: 175 PDHHSRGAYSESAGHSS----HRMFVEEEVVFKLLCRHDKVGSLIGKGGSVVRALQNETG 230
Query: 81 ASIKIADILPDSEERIVVISARENSEMRHSPAQDAVMRVHSRIAEIGFEPGQAVVARLLV 140
ASI+I + PDS+ER+VVISA+E SE +HSPAQ+AV+RVH R+ EIGFEP AVVA+LLV
Sbjct: 231 ASIQIVEAGPDSDERVVVISAQETSEQKHSPAQEAVIRVHCRLTEIGFEPSAAVVAKLLV 290
Query: 141 HSQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALF 200
S Q+GCLLG+GG ++SEMRRATGASIR+F K+Q S ++E+VQVIG+ SVQDALF
Sbjct: 291 RSPQVGCLLGKGGLVISEMRRATGASIRIFSKEQIKYI-SQNEEVVQVIGSLQSVQDALF 349
Query: 201 HITSRLRETIFPMKRPGPNNGHSYLPPFPEMPPPPFRPRHNPASPGSYPSP-VGPFHSMD 259
HIT+R+RETIFP++ P + + PPFPEMPPP FRPR++ S G P P VG H D
Sbjct: 350 HITNRIRETIFPIRTPPNFSAPPHFPPFPEMPPPLFRPRNHLMSSGHPPPPQVG--HPHD 407
Query: 260 RGMGPSQPFDHQA-AFSHGMDPMVPPNSDRIPFPYGSERPGHGPTFDRPPSPRSWTPQGV 318
P P DHQ AF HGM PPN DR+P+P G ++ P SPRSW P V
Sbjct: 408 HSTVPPMPVDHQQHAFVHGMG-RGPPNMDRVPYPRG---------YEGPNSPRSWNPLAV 457
Query: 319 GGGDPRGFDASSGFTPRNR-PVESGNHAAILTSTTIEVVIPQLYMAHVYGENNSNLSHIR 377
G+P G +S T RN PV++GN S TIE+ IP +Y+ HVYGENNSNL+ IR
Sbjct: 458 DRGNPGGTADTSSLTSRNETPVKNGNPLQNPNSLTIEITIPYMYLTHVYGENNSNLTQIR 517
Query: 378 QISGANVVVNDPKPGATEGVVMVSGTSDQMRAAQSLIHAFILCGVT 423
Q SGANV V+D KPGATEG+V+VSG DQ AAQ LI FILCG T
Sbjct: 518 QTSGANVAVHDSKPGATEGLVIVSGAPDQTHAAQCLIQGFILCGQT 563
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/179 (35%), Positives = 97/179 (54%), Gaps = 21/179 (11%)
Query: 49 EVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMR 108
+ VF+++C K + GG GA I + D++ +EER+VVI E
Sbjct: 18 DAVFRIVCPAAKTADVAAIGGD---------GAKILVEDLV-GAEERVVVIVGDE----- 62
Query: 109 HSPAQDAVMRVHSRIAEIGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIR 168
S AQ A++RV R + + V +L+ S Q+GC+LGRGG IV ++R+ +GA IR
Sbjct: 63 -SAAQVALIRVLERTMDEETK-NSTVSCKLVAPSYQVGCVLGRGGKIVEKIRQDSGAHIR 120
Query: 169 VFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKRPGPNNGHSYLPP 227
V PKDQ P DE +Q+ GN+ +V+ A+ +++ L E + + P+ G SY PP
Sbjct: 121 VLPKDQPPPPPG--DEFIQITGNFGAVKKAVLSVSACLHENNYGAFK--PSGGGSYAPP 175
>gi|356522258|ref|XP_003529764.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine
max]
Length = 559
Score = 407 bits (1046), Expect = e-111, Method: Compositional matrix adjust.
Identities = 240/404 (59%), Positives = 288/404 (71%), Gaps = 21/404 (5%)
Query: 24 YHSRG-YSSGPGHETVGGRNRMFYEEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGAS 82
+HSRG YS GH + +RMF EE+VVFKLLCH +KVGSLIGKGGS+VR QNETGAS
Sbjct: 171 HHSRGCYSESAGHSS----HRMFLEEDVVFKLLCHHEKVGSLIGKGGSVVRALQNETGAS 226
Query: 83 IKIADILPDSEERIVVISARENSEMRHSPAQDAVMRVHSRIAEIGFEPGQAVVARLLVHS 142
I+I + PDS+ER+VVISARE SE +HSPAQ+AV+RVH R+ EIGFEP AVVA+LLV S
Sbjct: 227 IQIVEAGPDSDERVVVISARETSEQKHSPAQEAVIRVHCRLTEIGFEPSAAVVAKLLVRS 286
Query: 143 QQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHI 202
Q+GCLLG+GG ++SEMRR TGASIR+F K+Q S ++E+VQVIG+ SVQDALFHI
Sbjct: 287 PQVGCLLGKGGLVISEMRRVTGASIRIFSKEQIKYI-SQNEEVVQVIGSLQSVQDALFHI 345
Query: 203 TSRLRETIFPMKRPGPNNGHSYLPPFPEMPPPPFRPRHNPASPGSYPSP-VGPFHSMDRG 261
TSR+RETIFP++ P + +LPPFPEMPPP FRPR++ S G P P VG H D
Sbjct: 346 TSRIRETIFPIRTPPNFSAPPHLPPFPEMPPPLFRPRNHLMSSGHPPPPQVG--HPHDHS 403
Query: 262 MGPSQPFDHQA-AFSHGMDPMVPPNSDRIPFPYGSERPGHGPTFDRPPSPRSWTPQGVGG 320
P P DHQ AF HGM PPN DR+P+P G ++ P SPRSW P V
Sbjct: 404 TVPPMPVDHQQHAFVHGMG-RGPPNMDRVPYPRG---------YEGPNSPRSWNPLAVNR 453
Query: 321 GDPRGFDASSGFTPRNRPV-ESGNHAAILTSTTIEVVIPQLYMAHVYGENNSNLSHIRQI 379
G+ G +S RN + E+GN + TIE+ IP +Y+ HVYGENNSNL+ IRQ
Sbjct: 454 GNSGGTADTSSLASRNENLGENGNPLQNPNNLTIEITIPHMYLTHVYGENNSNLTQIRQT 513
Query: 380 SGANVVVNDPKPGATEGVVMVSGTSDQMRAAQSLIHAFILCGVT 423
SGANVVV+DPKPGATEG+V+VSG DQ AAQSLI AFILCG T
Sbjct: 514 SGANVVVHDPKPGATEGLVIVSGAPDQTHAAQSLIQAFILCGQT 557
Score = 88.2 bits (217), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 56/156 (35%), Positives = 87/156 (55%), Gaps = 17/156 (10%)
Query: 49 EVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMR 108
+ VF+++C K + GG GA I + D++ +EER+VVI E
Sbjct: 18 DAVFRIVCPAAKTEDVATIGGD---------GAKILVEDLV-SAEERVVVIVGEE----- 62
Query: 109 HSPAQDAVMRVHSRIAEIGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIR 168
S AQ A++RV R + + V +L+ S Q+GC+LGRGG IV ++R+ TGA IR
Sbjct: 63 -SAAQVALVRVFERTVDEETK-NSTVSCKLVAPSYQVGCVLGRGGKIVEKIRQDTGAHIR 120
Query: 169 VFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITS 204
V PKDQ P P +E +Q+ GN+ +V+ A+ +++
Sbjct: 121 VLPKDQPPLPPPPGEEFIQITGNFGAVKKAVLSVSA 156
>gi|15217969|ref|NP_175569.1| RNA-binding KH domain-containing protein [Arabidopsis thaliana]
gi|12321677|gb|AAG50879.1|AC025294_17 hypothetical protein [Arabidopsis thaliana]
gi|12325367|gb|AAG52626.1|AC024261_13 hypothetical protein; 15135-12645 [Arabidopsis thaliana]
gi|31711718|gb|AAP68215.1| At1g51580 [Arabidopsis thaliana]
gi|110735740|dbj|BAE99849.1| hypothetical protein [Arabidopsis thaliana]
gi|332194564|gb|AEE32685.1| RNA-binding KH domain-containing protein [Arabidopsis thaliana]
Length = 621
Score = 400 bits (1028), Expect = e-109, Method: Compositional matrix adjust.
Identities = 245/434 (56%), Positives = 278/434 (64%), Gaps = 47/434 (10%)
Query: 2 VVQGNPYPPAAE--PFHQRGYAPGYHSRGYSSGPGH-------ETVGGRNRMFYEEEVVF 52
+Q + PP + PF Q GY P YHS Y H E VG NR EEEV F
Sbjct: 219 CLQESGAPPTWDECPFPQPGYPPEYHSMEYHPQWDHPPPNPMPEDVGPFNRPVVEEEVAF 278
Query: 53 KLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMRHSPA 112
+LLC DKVGSLIGKGG++VR QNE+GASIK++D DSEERI+VISAREN E RHS A
Sbjct: 279 RLLCPADKVGSLIGKGGAVVRALQNESGASIKVSDPTHDSEERIIVISARENLERRHSLA 338
Query: 113 QDAVMRVHSRIAEIGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPK 172
QD VMRVH+RI EIGFEP AVVARLLVHS IG LLG+GGH++SEMRRATGASIRVF K
Sbjct: 339 QDGVMRVHNRIVEIGFEPSAAVVARLLVHSPYIGRLLGKGGHLISEMRRATGASIRVFAK 398
Query: 173 DQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFP--MKRPGPNNGHSYLPPFPE 230
DQA + S HDEIVQVIGN +VQDALF I RLRE +FP + G
Sbjct: 399 DQATKYESQHDEIVQVIGNLKTVQDALFQILCRLREAMFPGRLPFQGMGGPPPPFMGPYP 458
Query: 231 MPPPPFRPRHNPASPGSYPSPVGPFHSMDRGMGPSQPFDHQAAFSHGMDPMVPPNSDRIP 290
PPPPF PR PASP Y SPVGPFH HG P DR P
Sbjct: 459 EPPPPFGPRQYPASPDRYHSPVGPFHER---------------HCHG------PGFDRPP 497
Query: 291 FPYGSERPGHGPTFDRPPSPRSWTPQGVGGGDPRGF---DASSGFTPRNRPVESGNHAAI 347
GP FDRPPSP SWTPQ G P G D + GF RN P+ S N +
Sbjct: 498 ----------GPGFDRPPSPMSWTPQPGIDGHPGGMVPPDVNHGFALRNEPIGSEN--PV 545
Query: 348 LTSTTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATEGVVMVSGTSDQM 407
+TS +E+VIPQ Y+ HVYGEN SNL++I+Q+SGANVVV+DPK G TEG+V+VSGTSDQ
Sbjct: 546 MTSANVEIVIPQAYLGHVYGENCSNLNYIKQVSGANVVVHDPKAGTTEGLVVVSGTSDQA 605
Query: 408 RAAQSLIHAFILCG 421
AQSL+HAFILCG
Sbjct: 606 HFAQSLLHAFILCG 619
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 79/257 (30%), Positives = 126/257 (49%), Gaps = 53/257 (20%)
Query: 48 EEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILP-DSEERIVVISA----- 101
E V F+LLC + G++IGKGGS++R Q+ TG+ I++ D +P SEER+V+I A
Sbjct: 17 ESVHFRLLCPATRTGAIIGKGGSVIRHLQSVTGSKIRVIDDIPVPSEERVVLIIAPSGKK 76
Query: 102 --------REN---------------------SEMRHSPAQDAVMRVHSRI------AEI 126
EN E S AQ A++RV RI A +
Sbjct: 77 KDESNVCDSENPGSEEPKQEKGSECAGTSGGDDEEAPSSAQMALLRVFERIVFGDDAATV 136
Query: 127 G---FEPGQAV-VARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAPRCGSPH 182
+ G++ + R++V Q+ L+ +GG ++ ++R +GA +R+ DQ P C P
Sbjct: 137 DGDELDKGESEGLCRMIVRGNQVDYLMSKGGKMIQKIREDSGAIVRISSTDQIPPCAFPG 196
Query: 183 DEIVQVIGNYHSVQDALFHITSRLRETIFP---MKRPGPNNGHSYLPPFPEMPPPPFRPR 239
D ++Q+ G + SV+ AL +T+ L+E+ P + P P G Y P + M + P+
Sbjct: 197 DVVIQMNGKFSSVKKALLLVTNCLQESGAPPTWDECPFPQPG--YPPEYHSM---EYHPQ 251
Query: 240 HNPASPGSYPSPVGPFH 256
+ P P VGPF+
Sbjct: 252 WDHPPPNPMPEDVGPFN 268
>gi|297847528|ref|XP_002891645.1| KH domain-containing protein [Arabidopsis lyrata subsp. lyrata]
gi|297337487|gb|EFH67904.1| KH domain-containing protein [Arabidopsis lyrata subsp. lyrata]
Length = 622
Score = 396 bits (1018), Expect = e-108, Method: Compositional matrix adjust.
Identities = 245/433 (56%), Positives = 277/433 (63%), Gaps = 46/433 (10%)
Query: 2 VVQGNPYPPAAE--PFHQRGYAPGYHSRGYSSGPGH------ETVGGRNRMFYEEEVVFK 53
+Q + PP + PF Q GY P YHS Y H E V NR EEEV F+
Sbjct: 221 CLQESGAPPTWDECPFPQPGYPPDYHSMEYHPQWDHPPNPMPEDVVPFNRPVVEEEVSFR 280
Query: 54 LLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMRHSPAQ 113
LLC DKVGSLIGKGG++VR QNE+GASIK++D DSEERI+VISAREN E RHS AQ
Sbjct: 281 LLCPADKVGSLIGKGGAVVRALQNESGASIKVSDPTHDSEERIIVISARENLERRHSLAQ 340
Query: 114 DAVMRVHSRIAEIGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKD 173
D VMRVH+RI EIGFEP AVVARLLVHS IG LLG+GGH++SEMRRATGASIRVF KD
Sbjct: 341 DGVMRVHNRIVEIGFEPSAAVVARLLVHSPYIGRLLGKGGHLISEMRRATGASIRVFAKD 400
Query: 174 QAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFP--MKRPGPNNGHSYLPPFPEM 231
QA + S HDEIVQVIGN +VQDALF I RLRE +FP + G
Sbjct: 401 QATKYESQHDEIVQVIGNLKTVQDALFQILCRLREAMFPGRLPFQGLGGPPPPFMGPYPE 460
Query: 232 PPPPFRPRHNPASPGSYPSPVGPFHSMDRGMGPSQPFDHQAAFSHGMDPMVPPNSDRIPF 291
PPPPF PR PASP Y SPVG FH HG P DR P
Sbjct: 461 PPPPFGPRQYPASPDRYHSPVGSFHER---------------HCHG------PGFDRPP- 498
Query: 292 PYGSERPGHGPTFDRPPSPRSWTPQGVGGGDPRGF---DASSGFTPRNRPVESGNHAAIL 348
GP FDRPPSP SWTPQ G P G D + GF RN P+ S N A +
Sbjct: 499 ---------GPGFDRPPSPMSWTPQPGIDGHPGGMVPPDVNHGFALRNEPIGSENPA--M 547
Query: 349 TSTTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATEGVVMVSGTSDQMR 408
TS +E+VIPQ Y+ HVYGEN SNL++I+Q+SGANVVV+DPK GATEG+V+VSGTSDQ
Sbjct: 548 TSANVEIVIPQAYLGHVYGENCSNLNYIKQVSGANVVVHDPKAGATEGLVVVSGTSDQAH 607
Query: 409 AAQSLIHAFILCG 421
AQSL+HAFILCG
Sbjct: 608 FAQSLLHAFILCG 620
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 101/408 (24%), Positives = 167/408 (40%), Gaps = 137/408 (33%)
Query: 48 EEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILP-DSEERIVVISA----- 101
E V F+LLC + G++IGKGGS++R Q+ TG+ I++ D +P SEER+V+I A
Sbjct: 17 ESVHFRLLCPAARTGAIIGKGGSVIRHLQSVTGSKIRVIDDIPVPSEERVVLIIAPSGKK 76
Query: 102 --------REN---------------------SEMRHSPAQDAVMRVHSRI------AEI 126
EN E S AQ A++RV RI A +
Sbjct: 77 KDDSNVFDSENPSSEEPKQEKGSECAGTSGGDDEEAPSSAQMALLRVLERIVFGDDAASV 136
Query: 127 ---GFEPGQA-VVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAPRCGSPH 182
G + G++ + R++V Q+ L+ +GG ++ +R +GA +R+ DQ P C P
Sbjct: 137 DGDGLDKGESESLCRMIVRGNQVDFLMSKGGKMIQRIREDSGAIVRISSTDQIPPCAFPG 196
Query: 183 DEIVQ--VIGNYHSVQDALFHITSRLRETIFPMKRPGPNNGHSYLPPFPEMPPPPFRPRH 240
D ++Q + G + SV+ AL IT+ L+E+ P P + E P P
Sbjct: 197 DVVIQMKITGKFSSVKKALLLITNCLQESGAP-------------PTWDECPFP------ 237
Query: 241 NPASPGSYPSPVGPFHSMDRGMGPSQPFDHQAAFSHGMDPMVPPNSDRIPFPYGSERPGH 300
PG P +HSM+ +
Sbjct: 238 ---QPGYPPD----YHSME----------------------------------------Y 250
Query: 301 GPTFDRPPSPRSWTPQGVGGGDPRGFDASSGFTPRNRPVESGNHAAILTSTTIEVVIPQL 360
P +D PP+P P+ V P NRPV + + ++ P
Sbjct: 251 HPQWDHPPNP---MPEDV--------------VPFNRPV-------VEEEVSFRLLCPAD 286
Query: 361 YMAHVYGENNSNLSHIRQISGANVVVNDPKPGATEGVVMVSGTSDQMR 408
+ + G+ + + ++ SGA++ V+DP + E ++++S + R
Sbjct: 287 KVGSLIGKGGAVVRALQNESGASIKVSDPTHDSEERIIVISARENLER 334
>gi|357159179|ref|XP_003578365.1| PREDICTED: poly(rC)-binding protein 2-like [Brachypodium
distachyon]
Length = 629
Score = 351 bits (901), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 202/424 (47%), Positives = 261/424 (61%), Gaps = 19/424 (4%)
Query: 9 PPAAEPFHQRGYAP----GYHSRGYSSGPGHETVGGRNRMFYEEEVVFKLLCHLDKVGSL 64
PP + QR Y P YH+R +SS R F E+E+VF+++C + VG +
Sbjct: 212 PPGVDSHSQRSYLPPHIPDYHARNFSS----NVAAPGPRFFIEQEIVFRMICLNEMVGGI 267
Query: 65 IGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMRHSPAQDAVMRVHSRIA 124
IGKGG+ +R Q++TGAS+K+ D + DS+ER++VISARENSEM HSPAQDAV+RV+SRI+
Sbjct: 268 IGKGGATIRALQSDTGASVKVIDAVADSDERVIVISARENSEMMHSPAQDAVLRVYSRIS 327
Query: 125 EIGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAPRCGSPHDE 184
E + AV ARLLV SQ IGCLLG+GG I++EMR TGASIR+F +Q PRC +DE
Sbjct: 328 EASMDKSSAVPARLLVPSQHIGCLLGKGGSIIAEMRNVTGASIRIFGNEQIPRCAQRNDE 387
Query: 185 IVQVIGNYHSVQDALFHITSRLRETIFPMKRPGPNNGHSYLPPFPEMPPPPFRPRHNPAS 244
+VQV GN+ S+QDAL HIT R+R+ I P K P P+ G S PP P P R +PA
Sbjct: 388 LVQVTGNFQSIQDALLHITGRIRDVIIPPK-PHPSGGMSPYPPAGSTPHHPS--RQDPAP 444
Query: 245 P----GSYPSPVGPFHSMDRGMGPSQPFDHQAAFSHGMDPMVPPNSDRIPFPYGSERPGH 300
P G P P+ PF + MGP DH+ H PM +DRIP+ YG E+ G
Sbjct: 445 PHHSGGMPPYPMHPFRP-NHPMGPFDVADHRPPGQHPAHPMEHMGADRIPYSYGCEQGGP 503
Query: 301 GPTFDRPPSPRSWTPQGVGGGDPRGF-DASSGFTPRNRPVE-SGNHAAILTSTTIEVVIP 358
P ++ PSPR+W P+ PR D R V S N A TSTT EVVIP
Sbjct: 504 RPFLEQ-PSPRTWAPEAQTADAPRSIPDKGLAMDSRKGSVAGSENQVATPTSTTTEVVIP 562
Query: 359 QLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATEGVVMVSGTSDQMRAAQSLIHAFI 418
Y+ + G N S+L+ I++ISGA + V+DPKPG T+ V V G +Q + AQSLIHAFI
Sbjct: 563 CKYIGFICGTNGSDLAEIQKISGAAITVHDPKPGDTDASVFVCGDPEQTKKAQSLIHAFI 622
Query: 419 LCGV 422
CG+
Sbjct: 623 FCGL 626
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 48/77 (62%), Gaps = 1/77 (1%)
Query: 134 VVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVF-PKDQAPRCGSPHDEIVQVIGNY 192
V R+L Q+GC+LG+GG V MR+ +GA IRVF KDQ P C DE++ + G++
Sbjct: 112 VGCRMLAAGGQVGCVLGKGGKTVERMRQESGAQIRVFRNKDQVPPCALQGDELIHISGSF 171
Query: 193 HSVQDALFHITSRLRET 209
+ + AL +++ L++
Sbjct: 172 SAARKALLLVSTCLQDN 188
>gi|326504604|dbj|BAK06593.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 531
Score = 339 bits (869), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 197/427 (46%), Positives = 260/427 (60%), Gaps = 26/427 (6%)
Query: 9 PPAAEPFHQRGY-----APGYHSRGYSS---GPGHETVGGRNRMFYEEEVVFKLLCHLDK 60
PP +P QR Y P YH+R +SS PG R F E+E+VF+++C D
Sbjct: 115 PPGVDPHSQRSYLPPPHVPDYHARNFSSNGAAPG-------PRFFVEQEIVFRMICLNDM 167
Query: 61 VGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMRHSPAQDAVMRVH 120
VG +IGKGGS +R Q+ETGAS+K+ D + DS+ERI+VISARENSEM SP+QDA++RV+
Sbjct: 168 VGGVIGKGGSTIRALQSETGASVKVIDPVADSDERIIVISARENSEMMRSPSQDALLRVY 227
Query: 121 SRIAEIGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAPRCGS 180
S+I+E + +V ARLLV +Q IGCLLG+GG I++EMR+ TGASIR+F +Q PRC
Sbjct: 228 SKISEASMDKSSSVPARLLVPAQHIGCLLGKGGSIIAEMRKLTGASIRIFGNEQIPRCAQ 287
Query: 181 PHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKRPGPNNGHSYLPPFPEMPPPPFRPRH 240
+DE+VQV G++ S+QDAL HIT R+R+ I P K P P+ G +PP+P + P
Sbjct: 288 RNDELVQVTGSFQSIQDALLHITGRIRDLIIPPK-PHPSGG---MPPYPPVGNPSHHQSR 343
Query: 241 NPA----SPGSYPSPVGPFHSMDRGMGPSQPFDHQAAFSHGMDPMVPPNSDRIPFPYGSE 296
A S G P P+ PF + MGP D + PM +DR+P+PYG E
Sbjct: 344 QEAPSHHSGGMPPYPMHPFRP-NPPMGPFDVADPRPPGPPPSHPMEHMGADRMPYPYGCE 402
Query: 297 RPGHGPTFDRPPSPRSWTPQGVGGGDPRGF-DASSGFTPRNRPVESGNHAAILTSTTIEV 355
+ G P F PSPR+W P+ PR D R PV S N A +TT EV
Sbjct: 403 QGGPRP-FVEQPSPRTWAPEAPATDAPRSMPDTVPAVDFRKGPVSSENQVATPATTTTEV 461
Query: 356 VIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATEGVVMVSGTSDQMRAAQSLIH 415
VIP Y+ V G N S+L I++ISGA + V+DPKPG T V++ G +Q + AQSLIH
Sbjct: 462 VIPCKYIGFVCGTNGSDLDEIKKISGAAITVHDPKPGDTNSTVIICGDPEQTKKAQSLIH 521
Query: 416 AFILCGV 422
AFI CG+
Sbjct: 522 AFIFCGL 528
>gi|218202392|gb|EEC84819.1| hypothetical protein OsI_31905 [Oryza sativa Indica Group]
Length = 617
Score = 337 bits (863), Expect = 8e-90, Method: Compositional matrix adjust.
Identities = 193/421 (45%), Positives = 255/421 (60%), Gaps = 25/421 (5%)
Query: 13 EPFHQRGY----APGYHSRGYSS---GPGHETVGGRNRMFYEEEVVFKLLCHLDKVGSLI 65
+P QRGY P YH+R YSS PG R F E+E+VF+++C + VGS+I
Sbjct: 208 DPHSQRGYLPPSMPDYHARNYSSNMAAPG-------PRFFVEQEIVFRMICLNEMVGSII 260
Query: 66 GKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMRHSPAQDAVMRVHSRIAE 125
GKGGS +R Q+ETGASIKI + DSEER++VISA ENSEM HSPAQDAV+RVHSRI+E
Sbjct: 261 GKGGSTIRALQSETGASIKIIEPNSDSEERVIVISAHENSEMMHSPAQDAVLRVHSRISE 320
Query: 126 IGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAPRCGSPHDEI 185
+ AV ARLLV SQ IGCLLG+GG I++EMR+ TGA IR+F +Q PRC +DE+
Sbjct: 321 SSMDKSSAVTARLLVPSQHIGCLLGKGGSIIAEMRKITGAGIRIFGNEQIPRCAQRNDEL 380
Query: 186 VQVIGNYHSVQDALFHITSRLRETIFPMKRPGPNNGHSYLPPFPEMPPPPFRPRHNPASP 245
VQV G++ S+QDAL HIT R+R+ I PMK + G P P PP PR PA P
Sbjct: 381 VQVTGSFQSIQDALLHITGRIRDVIIPMKP---HPGGGMPPYPPGGNAPPHHPRQEPAPP 437
Query: 246 ----GSYPSPVGPFHSMDRGMGPSQPFDHQAAFSHGMDPMVPPNSDRIPFPYGSERPGHG 301
G P P+ F + DR MGP DH+ H M+ M +DR+P+ YG E+ G
Sbjct: 438 HPTGGMPPYPMPSFRA-DRPMGPFDMVDHRPPPPHSMEHM---GADRMPYSYGCEQGGGP 493
Query: 302 PTFDRPPSPRSWTPQGVGGGDPRGFDASSGFTPRNRPVESGNHAAILTSTTIEVVIPQLY 361
F PSP +W P+ PR + + +G + S EV+IP+ Y
Sbjct: 494 RPFLDQPSPSAWAPEAPNSEAPRNMPETVPPADFRKGAVAGTNQVATPSNATEVIIPRKY 553
Query: 362 MAHVYGENNSNLSHIRQISGANVVVNDPKPGATEGVVMVSGTSDQMRAAQSLIHAFILCG 421
+ + G N S+L+ I+++SGA + V+ PKPG +V++ G DQ + AQSL+HAFI CG
Sbjct: 554 IGFICGANGSDLAEIKKMSGATITVHHPKPGDANALVIICGDPDQTKKAQSLLHAFIFCG 613
Query: 422 V 422
+
Sbjct: 614 L 614
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 51/77 (66%), Gaps = 1/77 (1%)
Query: 134 VVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVF-PKDQAPRCGSPHDEIVQVIGNY 192
V R+L S Q+GC+LG+GG V MR+ +GA IRVF +DQ P +P DE++ + GN+
Sbjct: 110 VGCRMLAASGQVGCVLGKGGKTVERMRQESGAQIRVFRNRDQLPPWAAPVDELIHISGNF 169
Query: 193 HSVQDALFHITSRLRET 209
+V+ AL +T+ L++
Sbjct: 170 SAVRKALLLVTTCLQDN 186
>gi|222641854|gb|EEE69986.1| hypothetical protein OsJ_29891 [Oryza sativa Japonica Group]
Length = 609
Score = 337 bits (863), Expect = 9e-90, Method: Compositional matrix adjust.
Identities = 193/421 (45%), Positives = 255/421 (60%), Gaps = 25/421 (5%)
Query: 13 EPFHQRGY----APGYHSRGYSS---GPGHETVGGRNRMFYEEEVVFKLLCHLDKVGSLI 65
+P QRGY P YH+R YSS PG R F E+E+VF+++C + VGS+I
Sbjct: 200 DPHSQRGYLPPSMPDYHARNYSSNMAAPG-------PRFFVEQEIVFRMICLNEMVGSII 252
Query: 66 GKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMRHSPAQDAVMRVHSRIAE 125
GKGGS +R Q+ETGASIKI + DSEER++VISA ENSEM HSPAQDAV+RVHSRI+E
Sbjct: 253 GKGGSTIRALQSETGASIKIIEPNSDSEERVIVISAHENSEMMHSPAQDAVLRVHSRISE 312
Query: 126 IGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAPRCGSPHDEI 185
+ AV ARLLV SQ IGCLLG+GG I++EMR+ TGA IR+F +Q PRC +DE+
Sbjct: 313 SSMDKSSAVTARLLVPSQHIGCLLGKGGSIIAEMRKITGAGIRIFGNEQIPRCAQRNDEL 372
Query: 186 VQVIGNYHSVQDALFHITSRLRETIFPMKRPGPNNGHSYLPPFPEMPPPPFRPRHNPASP 245
VQV G++ S+QDAL HIT R+R+ I PMK + G P P PP PR PA P
Sbjct: 373 VQVTGSFQSIQDALLHITGRIRDVIIPMKP---HPGGGMPPYPPGGNAPPHHPRQEPAPP 429
Query: 246 ----GSYPSPVGPFHSMDRGMGPSQPFDHQAAFSHGMDPMVPPNSDRIPFPYGSERPGHG 301
G P P+ F + DR MGP DH+ H M+ M +DR+P+ YG E+ G
Sbjct: 430 HPTGGMPPYPMPSFRA-DRPMGPFDMVDHRPPPPHSMEHM---GADRMPYSYGCEQGGGP 485
Query: 302 PTFDRPPSPRSWTPQGVGGGDPRGFDASSGFTPRNRPVESGNHAAILTSTTIEVVIPQLY 361
F PSP +W P+ PR + + +G + S EV+IP+ Y
Sbjct: 486 RPFLDQPSPSAWAPEAPNSEAPRNMPETVPPADFRKGAVAGTNQVATPSNATEVIIPRKY 545
Query: 362 MAHVYGENNSNLSHIRQISGANVVVNDPKPGATEGVVMVSGTSDQMRAAQSLIHAFILCG 421
+ + G N S+L+ I+++SGA + V+ PKPG +V++ G DQ + AQSL+HAFI CG
Sbjct: 546 IGFICGANGSDLAEIKKMSGATITVHHPKPGDANALVIICGDPDQTKKAQSLLHAFIFCG 605
Query: 422 V 422
+
Sbjct: 606 L 606
>gi|326513114|dbj|BAK06797.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 627
Score = 335 bits (860), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 197/428 (46%), Positives = 260/428 (60%), Gaps = 27/428 (6%)
Query: 9 PPAAEPFHQRGY-----APGYHSRGYSS---GPGHETVGGRNRMFYEEEVVFKLLCHLDK 60
PP +P QR Y P YH+R +SS PG R F E+E+VF+++C D
Sbjct: 210 PPGVDPHSQRSYLPPPHVPDYHARNFSSNGAAPG-------PRFFVEQEIVFRMICLNDM 262
Query: 61 VGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMRHSPAQDAVMRVH 120
VG +IGKGGS +R Q+ETGAS+K+ D + DS+ERI+VISARENSEM SP+QDA++RV+
Sbjct: 263 VGGVIGKGGSTIRALQSETGASVKVIDPVADSDERIIVISARENSEMMRSPSQDALLRVY 322
Query: 121 SRIAEIGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAPRCGS 180
S+I+E + +V ARLLV +Q IGCLLG+GG I++EMR+ TGASIR+F +Q PRC
Sbjct: 323 SKISEASMDKSSSVPARLLVPAQHIGCLLGKGGSIIAEMRKLTGASIRIFGNEQIPRCAQ 382
Query: 181 PHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKRPGPNNGHSYLPPFPEMPPPPFRPRH 240
+DE+VQV G++ S+QDAL HIT R+R+ I P K P P+ G +PP+P + P
Sbjct: 383 RNDELVQVTGSFQSIQDALLHITGRIRDLIIPPK-PHPSGG---MPPYPPVGNPSHHQSR 438
Query: 241 NPA----SPGSYPSPVGPFHSMDRGMGPSQPFDHQAAFSHGMDPMVPPNSDRIPFPYGSE 296
A S G P P+ PF + MGP D + PM +DR+P+PYG E
Sbjct: 439 QEAPSHHSGGMPPYPMHPFRP-NPPMGPFDVADPRPPGPPPSHPMEHMGADRMPYPYGCE 497
Query: 297 RPGHGPTFDRPPSPRSWTPQGVGGGDPRGF-DASSGFTPRNRPVESG-NHAAILTSTTIE 354
+ G P F PSPR+W P+ PR D R PV S N A +TT E
Sbjct: 498 QGGPRP-FVEQPSPRTWAPEAPATDAPRSMPDTVPAVDFRKGPVSSSENQVATPATTTTE 556
Query: 355 VVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATEGVVMVSGTSDQMRAAQSLI 414
VVIP Y+ V G N S+L I++ISGA + V+DPKPG T V++ G +Q + AQSLI
Sbjct: 557 VVIPCKYIGFVCGTNGSDLDEIKKISGAAITVHDPKPGDTNSTVIICGDPEQTKKAQSLI 616
Query: 415 HAFILCGV 422
HAFI CG+
Sbjct: 617 HAFIFCGL 624
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 61/115 (53%), Gaps = 21/115 (18%)
Query: 134 VVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVF-PKDQAPRCGSPHDEIVQVIGNY 192
V R+L Q+GC+LG+GG V MR+ +GA IRVF ++Q P C DE++ + G++
Sbjct: 110 VGCRMLAAGGQVGCVLGKGGKTVERMRQESGAQIRVFRNREQVPPCALQGDELIHISGSF 169
Query: 193 HSVQDALFHITSRLRE------TIFPMKRP--------------GPNNGHSYLPP 227
+ + AL +++ L++ + FP RP P++ SYLPP
Sbjct: 170 SAARKALLLVSTCLQDNPRPDTSNFPSGRPFGPPGSGVGCPPGVDPHSQRSYLPP 224
>gi|115479947|ref|NP_001063567.1| Os09g0498600 [Oryza sativa Japonica Group]
gi|113631800|dbj|BAF25481.1| Os09g0498600 [Oryza sativa Japonica Group]
gi|215695028|dbj|BAG90219.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 398
Score = 331 bits (848), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 188/408 (46%), Positives = 249/408 (61%), Gaps = 21/408 (5%)
Query: 22 PGYHSRGYSS---GPGHETVGGRNRMFYEEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNE 78
P YH+R YSS PG R F E+E+VF+++C + VGS+IGKGGS +R Q+E
Sbjct: 2 PDYHARNYSSNMAAPG-------PRFFVEQEIVFRMICLNEMVGSIIGKGGSTIRALQSE 54
Query: 79 TGASIKIADILPDSEERIVVISARENSEMRHSPAQDAVMRVHSRIAEIGFEPGQAVVARL 138
TGASIKI + DSEER++VISA ENSEM HSPAQDAV+RVHSRI+E + AV ARL
Sbjct: 55 TGASIKIIEPNSDSEERVIVISAHENSEMMHSPAQDAVLRVHSRISESSMDKSSAVTARL 114
Query: 139 LVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDA 198
LV SQ IGCLLG+GG I++EMR+ TGA IR+F +Q PRC +DE+VQV G++ S+QDA
Sbjct: 115 LVPSQHIGCLLGKGGSIIAEMRKITGAGIRIFGNEQIPRCAQRNDELVQVTGSFQSIQDA 174
Query: 199 LFHITSRLRETIFPMKRPGPNNGHSYLPPFPEMPPPPFRPRHNPASP----GSYPSPVGP 254
L HIT R+R+ I PMK + G P P PP PR PA P G P P+
Sbjct: 175 LLHITGRIRDVIIPMKP---HPGGGMPPYPPGGNAPPHHPRQEPAPPHPTGGMPPYPMPS 231
Query: 255 FHSMDRGMGPSQPFDHQAAFSHGMDPMVPPNSDRIPFPYGSERPGHGPTFDRPPSPRSWT 314
F + DR MGP DH+ H M+ M +DR+P+ YG E+ G F PSP +W
Sbjct: 232 FRA-DRPMGPFDMVDHRPPPPHSMEHM---GADRMPYSYGCEQGGGPRPFLDQPSPSAWA 287
Query: 315 PQGVGGGDPRGFDASSGFTPRNRPVESGNHAAILTSTTIEVVIPQLYMAHVYGENNSNLS 374
P+ PR + + +G + S EV+IP+ Y+ + G N S+L+
Sbjct: 288 PEAPNSEAPRNMPETVPPADFRKGAVAGTNQVATPSNATEVIIPRKYIGFICGANGSDLA 347
Query: 375 HIRQISGANVVVNDPKPGATEGVVMVSGTSDQMRAAQSLIHAFILCGV 422
I+++SGA + V+ PKPG +V++ G DQ + AQSL+HAFI CG+
Sbjct: 348 EIKKMSGATITVHHPKPGDANALVIICGDPDQTKKAQSLLHAFIFCGL 395
>gi|242045198|ref|XP_002460470.1| hypothetical protein SORBIDRAFT_02g028920 [Sorghum bicolor]
gi|241923847|gb|EER96991.1| hypothetical protein SORBIDRAFT_02g028920 [Sorghum bicolor]
Length = 371
Score = 314 bits (805), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 181/375 (48%), Positives = 240/375 (64%), Gaps = 18/375 (4%)
Query: 59 DKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMRHSPAQDAVMR 118
+ VGS+IGKGGS +R Q+ETGA IKI +++ DS+ER+V ISARENS+M HSPAQDAV+R
Sbjct: 6 EMVGSIIGKGGSTIRALQSETGACIKILELVADSDERVVAISARENSDMMHSPAQDAVVR 65
Query: 119 VHSRIAEIGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAPRC 178
V+SRI+E + ARLLV SQ IGCLLG+GG I++EMR+ TGASIR+F +Q PRC
Sbjct: 66 VYSRISEASMDRSSPTPARLLVPSQHIGCLLGKGGSIITEMRKITGASIRIFGNEQIPRC 125
Query: 179 GSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKRPGPNNGHSYLPPFPEMPPPPF-R 237
+DE+VQV G++ S+QDAL HIT R+R+ I P +P P+ G +PP+P + P +
Sbjct: 126 AQRNDEMVQVTGSFQSIQDALLHITGRIRDVILP--KPHPSGG---MPPYPPVGNIPVHQ 180
Query: 238 PRHNPASPGSYPS---PVGPFHSM--DRGMGPSQPFDHQAAFSHGMDPMVPPNSDRIPFP 292
R P P +PS P P HS D MG + DH+ H M+ M +DR+P+
Sbjct: 181 SRQEPPPPHLHPSGGMPPYPMHSFRPDAPMGHFETGDHRPPPVHSMEYM---GADRMPYS 237
Query: 293 YGSERPGHGPTFDRPPSPRSWTPQG--VGGGDPRGF-DASSGFTPRNRPVESGNHAAILT 349
YG E+ G P ++ PSPR+W P+ PR DA R PV S N A T
Sbjct: 238 YGGEQGGPRPFLEQ-PSPRTWPPEAPRTNSEAPRNMPDAVLATDLRKGPVASENQVATPT 296
Query: 350 STTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATEGVVMVSGTSDQMRA 409
STT EVVIP Y+ V G + S + IRQ+SGA++ V+DPKPG T +V++ G +Q +
Sbjct: 297 STTTEVVIPCKYIGFVCGNSGSEIEEIRQMSGASITVHDPKPGDTNSIVVICGDPEQTKK 356
Query: 410 AQSLIHAFILCGVTS 424
AQSLIHAFI CG+ +
Sbjct: 357 AQSLIHAFIFCGLQT 371
>gi|226529077|ref|NP_001146029.1| hypothetical protein [Zea mays]
gi|219885375|gb|ACL53062.1| unknown [Zea mays]
gi|414589866|tpg|DAA40437.1| TPA: hypothetical protein ZEAMMB73_485730 [Zea mays]
Length = 624
Score = 312 bits (799), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 193/437 (44%), Positives = 258/437 (59%), Gaps = 39/437 (8%)
Query: 5 GNPYPPAAEPFHQRGYAP----GYHSRGYSSGPGHETVGGRNRMFYEEEVVFKLLCHLDK 60
G PP +P QR Y P YH+R Y S G R F+E+E+VF+++ +
Sbjct: 205 GTGCPPGMDPHSQRSYLPPHIPDYHTRNYPSNAGPPG----PRFFFEQEIVFRMIILNEM 260
Query: 61 VGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMRHSPAQDAVMRVH 120
VGS+IGKGGS +R Q+ETGA IKI + + DS+ER+V I+ARENS+M HSPAQDAV+RV+
Sbjct: 261 VGSIIGKGGSTIRALQSETGACIKILEPVADSDERVVAITARENSDMLHSPAQDAVVRVY 320
Query: 121 SRIAEIGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAPRCGS 180
SRI+E + ARLLV SQ IGCLLG+GG I+SEMR+ TGA+IR+F +Q PRC
Sbjct: 321 SRISEASIDRSSHTPARLLVPSQHIGCLLGKGGSIISEMRKITGANIRIFGNEQIPRCAQ 380
Query: 181 PHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKRPGPNNGHSYLPPFP----------- 229
+DE+VQV G++ S+QDAL HIT R+R+ I P +P P+ G +PP+P
Sbjct: 381 RNDEMVQVTGSFQSIQDALLHITGRIRDVILP--KPHPSGG---MPPYPPVGNIPVHQSR 435
Query: 230 -EMPPPPFRPRHNPASPGSYPSPVGPFHSMDRGMGPSQPFDHQAAFSHGMDPMVPPNSDR 288
E PPP P S G P P+ PF D MG + DH+ H M+ M +DR
Sbjct: 436 QEQPPPHLHP-----SGGMPPYPMHPFRP-DAPMGHFEMGDHRPPPVHSMEYM---GADR 486
Query: 289 IPFPYGSERPGHGPTFDRPPSPRSWTPQG--VGGGDPRGF-DASSGFTPRNRPVESGNHA 345
+P+ YG E+ G P ++ PSPR+ P+ PR DA R PV N
Sbjct: 487 MPYLYGVEQGGPRPFLEQ-PSPRTCPPEAPRTNSEVPRNMSDAVPATDFRKGPVAIENQV 545
Query: 346 AILTSTTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATEGVVMVSGTSD 405
A T TT EV+IP Y+ V G N S + I ++SGA++ V+DPK G V++ G +
Sbjct: 546 ATPTGTT-EVIIPCNYIGFVCGNNGSEIEEIEKMSGASITVHDPKAGDANSKVVICGDPE 604
Query: 406 QMRAAQSLIHAFILCGV 422
+ + AQSLIHAFI CG+
Sbjct: 605 ETKKAQSLIHAFIFCGL 621
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 39/116 (33%), Positives = 60/116 (51%), Gaps = 21/116 (18%)
Query: 133 AVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVF-PKDQAPRCGSPHDEIVQVIGN 191
AV R+L Q+GC+LG+GG V MR+ GA IRVF ++Q P P DE++ + G+
Sbjct: 108 AVGCRMLAAGWQVGCVLGKGGKTVERMRQECGAQIRVFRNREQLPPWAPPGDELIHISGS 167
Query: 192 YHSVQDALFHITSRLRET------IFPMKRP--------------GPNNGHSYLPP 227
+ V+ AL +++ L++ P+ RP P++ SYLPP
Sbjct: 168 FSQVRKALLAVSTCLQDNPRPDTHNIPIGRPFGLPGSGTGCPPGMDPHSQRSYLPP 223
>gi|414589867|tpg|DAA40438.1| TPA: hypothetical protein ZEAMMB73_485730 [Zea mays]
Length = 640
Score = 286 bits (733), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 182/417 (43%), Positives = 243/417 (58%), Gaps = 39/417 (9%)
Query: 5 GNPYPPAAEPFHQRGYAP----GYHSRGYSSGPGHETVGGRNRMFYEEEVVFKLLCHLDK 60
G PP +P QR Y P YH+R Y S G R F+E+E+VF+++ +
Sbjct: 205 GTGCPPGMDPHSQRSYLPPHIPDYHTRNYPSNAGPPG----PRFFFEQEIVFRMIILNEM 260
Query: 61 VGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMRHSPAQDAVMRVH 120
VGS+IGKGGS +R Q+ETGA IKI + + DS+ER+V I+ARENS+M HSPAQDAV+RV+
Sbjct: 261 VGSIIGKGGSTIRALQSETGACIKILEPVADSDERVVAITARENSDMLHSPAQDAVVRVY 320
Query: 121 SRIAEIGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAPRCGS 180
SRI+E + ARLLV SQ IGCLLG+GG I+SEMR+ TGA+IR+F +Q PRC
Sbjct: 321 SRISEASIDRSSHTPARLLVPSQHIGCLLGKGGSIISEMRKITGANIRIFGNEQIPRCAQ 380
Query: 181 PHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKRPGPNNGHSYLPPFP----------- 229
+DE+VQV G++ S+QDAL HIT R+R+ I P +P P+ G +PP+P
Sbjct: 381 RNDEMVQVTGSFQSIQDALLHITGRIRDVILP--KPHPSGG---MPPYPPVGNIPVHQSR 435
Query: 230 -EMPPPPFRPRHNPASPGSYPSPVGPFHSMDRGMGPSQPFDHQAAFSHGMDPMVPPNSDR 288
E PPP P S G P P+ PF D MG + DH+ H M+ M +DR
Sbjct: 436 QEQPPPHLHP-----SGGMPPYPMHPFRP-DAPMGHFEMGDHRPPPVHSMEYM---GADR 486
Query: 289 IPFPYGSERPGHGPTFDRPPSPRSWTPQG--VGGGDPRGF-DASSGFTPRNRPVESGNHA 345
+P+ YG E+ G P ++ PSPR+ P+ PR DA R PV N
Sbjct: 487 MPYLYGVEQGGPRPFLEQ-PSPRTCPPEAPRTNSEVPRNMSDAVPATDFRKGPVAIENQV 545
Query: 346 AILTSTTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATEGVVMVSG 402
A T TT EV+IP Y+ V G N S + I ++SGA++ V+DPK G V++ G
Sbjct: 546 ATPTGTT-EVIIPCNYIGFVCGNNGSEIEEIEKMSGASITVHDPKAGDANSKVVICG 601
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 39/116 (33%), Positives = 60/116 (51%), Gaps = 21/116 (18%)
Query: 133 AVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVF-PKDQAPRCGSPHDEIVQVIGN 191
AV R+L Q+GC+LG+GG V MR+ GA IRVF ++Q P P DE++ + G+
Sbjct: 108 AVGCRMLAAGWQVGCVLGKGGKTVERMRQECGAQIRVFRNREQLPPWAPPGDELIHISGS 167
Query: 192 YHSVQDALFHITSRLRET------IFPMKRP--------------GPNNGHSYLPP 227
+ V+ AL +++ L++ P+ RP P++ SYLPP
Sbjct: 168 FSQVRKALLAVSTCLQDNPRPDTHNIPIGRPFGLPGSGTGCPPGMDPHSQRSYLPP 223
>gi|356557593|ref|XP_003547100.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine
max]
Length = 710
Score = 280 bits (716), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 167/404 (41%), Positives = 241/404 (59%), Gaps = 37/404 (9%)
Query: 46 YEEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENS 105
++EV F++LC D+VG +IGKGG+IVR Q+ETGA+I I + + E+R++ I+A EN
Sbjct: 315 LKQEVTFRILCSNDRVGGVIGKGGNIVRALQSETGATISIGPAVAECEDRLITIAASENP 374
Query: 106 EMRHSPAQDAVMRVHSRIAEIGFEPG--------QAVVARLLVHSQQIGCLLGRGGHIVS 157
E R+SPAQ A + V SR E+GFE G V RL+V S Q+GCL+G+GG IVS
Sbjct: 375 ESRYSPAQKAAVLVFSRSIEVGFEKGLDSGLNKGSIVTVRLVVPSSQVGCLIGKGGVIVS 434
Query: 158 EMRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKRPG 217
EMR+ATGA+IR+ DQ P+C S +D++VQ+ G + SVQDAL++ RLR+ +F +
Sbjct: 435 EMRKATGANIRIIGTDQVPKCASDNDQVVQISGEFSSVQDALYNAMGRLRDNLFVSTQ-- 492
Query: 218 PNNGHSYLPPFPEMPPPPFRPRHNPASPGSYPSPVGPFHSMDR--------GMGPSQPFD 269
N+ + + P+ + + GS P HS+ R +G S+ D
Sbjct: 493 -NSAGTRSLSSLRVDTSPYGRQQDVVPLGSQLPP-ATSHSLSRHTFAQGIDHLGLSRNLD 550
Query: 270 HQAA---FSHGMDPMVPP-----NSDRIPFPYGSERPGHGPTFD-RPPSPRSWTPQGVGG 320
H ++ ++ +D P N DR P R D RP SP W P V G
Sbjct: 551 HPSSPGLWTRNLDRPSSPGLWTRNLDRPSSPGLWTR-----NLDHRPSSPGLWAPPTVAG 605
Query: 321 GDPRGF-DASSGFTPRNRPVE--SGNHAAILTSTTIEVVIPQLYMAHVYGENNSNLSHIR 377
+ RG D S G T R +E SG+ +AI+T+T +E+V+P + VYGEN SNL+ +R
Sbjct: 606 INSRGINDFSLGLTSRKGGLELVSGSKSAIVTNTIVEIVVPDDTIDCVYGENGSNLARLR 665
Query: 378 QISGANVVVNDPKPGATEGVVMVSGTSDQMRAAQSLIHAFILCG 421
QISGANVVV++P+PG ++ ++++SGT D+ +AAQSL+ AFIL G
Sbjct: 666 QISGANVVVHEPRPGTSDRIIVISGTPDETQAAQSLLQAFILSG 709
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 60/175 (34%), Positives = 99/175 (56%), Gaps = 17/175 (9%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISA-------- 101
V F+LLC+ ++G +IGK GS+++T Q TGA I+I D + +RI+++ A
Sbjct: 45 VAFRLLCNASRIGGVIGKSGSVIKTLQQSTGAKIRIEDAPQELPDRIILVIADAALSGKI 104
Query: 102 --RENSEMRHSPAQDAVMRVHSRIAEIG-----FEPGQAVVA-RLLVHSQQIGCLLGRGG 153
R + S AQ+A+++V RI G + G V++ RL+ + Q G ++G+GG
Sbjct: 105 LLRNEEVIEVSKAQEALLKVFDRILRSGGGDRSVDVGDRVMSCRLVADAAQAGSVIGKGG 164
Query: 154 HIVSEMRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRE 208
+V +++ TG IRV D P C S DEI+++ G SV+ AL ++ RL++
Sbjct: 165 KVVERIKKETGCKIRVL-TDDLPLCASASDEIIEIEGRVSSVKKALVAVSQRLQD 218
>gi|225464083|ref|XP_002269250.1| PREDICTED: KH domain-containing protein At4g18375-like [Vitis
vinifera]
Length = 648
Score = 278 bits (710), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 163/428 (38%), Positives = 239/428 (55%), Gaps = 55/428 (12%)
Query: 10 PAAEPFHQRGYA----PGYHSRGYSSGP-----GHETVGGRNRMFYEEEVVFKLLCHLDK 60
P + F QRG P ++ Y+SG E + + ++EV+FK+LC D+
Sbjct: 251 PRVDLFQQRGSVLPPIPS-NTISYASGSRPLSINTERISTLDPKTSQQEVIFKILCSNDR 309
Query: 61 VGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMRHSPAQDAVMRVH 120
VG +IGKGG+IV+ QNE GASI + + + +ER++ I+A EN E R+SPAQ+ V+ V
Sbjct: 310 VGGVIGKGGTIVKALQNEAGASISVGAPVAECDERLITITASENPESRYSPAQNGVILVF 369
Query: 121 SRIAEIGFEPG-------QAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKD 173
+R E G E G V ARL+V S Q+GCL+G+GG I+SEMR+A+GA IR+ D
Sbjct: 370 NRSIEAGIEKGLDSGSKGSPVSARLVVPSNQVGCLMGKGGTIISEMRKASGAGIRIIGSD 429
Query: 174 QAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKRPGPNNGHSYLPPFPEMPP 233
Q P+C S +D++VQ+ G + +VQD L+HIT RLR+ +FP K NG
Sbjct: 430 QVPKCASENDQVVQISGEFVNVQDGLYHITGRLRDNLFPSKTL---NGAGIRSSSAMNEI 486
Query: 234 PPFRPRHNPASPGSYPSPVGPFHSMDRGMGPSQPFDHQAAFSHGMDPMVPPNSDRIPFPY 293
P+ +PAS G + S +G S F + MD +
Sbjct: 487 SPYGRVRDPASFGLHSS-----------VGVSPSFSRHTTLTQSMDHL------------ 523
Query: 294 GSERPGHGPTFDRPPSPRSWTPQGVGGGDPRGFDASSGFTPRNRPVESGNHAAILTSTTI 353
G + D P SPR W Q V G +PR + SG+ +AI+T+TT+
Sbjct: 524 -----GLSHSLDHPTSPRLWPSQTVTGVNPRNIKG-------GIELGSGSKSAIITNTTV 571
Query: 354 EVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATEGVVMVSGTSDQMRAAQSL 413
E+VIP+ + VYGEN +NL+ +R+ISGA V +++P+PG ++ +V++SGT D+ +AAQSL
Sbjct: 572 EIVIPENVIGSVYGENGNNLARLRKISGAKVTLHEPRPGTSDRIVIISGTPDETQAAQSL 631
Query: 414 IHAFILCG 421
+ AFI G
Sbjct: 632 LQAFIHTG 639
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 62/175 (35%), Positives = 105/175 (60%), Gaps = 16/175 (9%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISA-------- 101
V F+LLCH ++G +IGK G IV+ Q++TGA I++ D S+ R++++ A
Sbjct: 51 VAFRLLCHASRIGGVIGKSGVIVKQLQSDTGARIRVEDSPSTSDHRVILVIAPASVNRRI 110
Query: 102 ---RENSEMRHSPAQDAVMRVHSRIAEI-----GFEPGQAVVARLLVHSQQIGCLLGRGG 153
+ E+ S AQ+AV+RV RI E+ G PG V RLL + Q+G ++G+GG
Sbjct: 111 ALQGSSEEVEASAAQEAVLRVFERILEVAAVVDGVPPGGVVSCRLLAETSQVGSVIGKGG 170
Query: 154 HIVSEMRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRE 208
+V ++RR +G+ I+V ++ P C + DE+V++ G+ +V+ AL ++ RL++
Sbjct: 171 KVVEKIRRESGSKIKVLTAEKLPTCAASTDEMVEIEGDVLAVKKALVAVSRRLQD 225
>gi|296088778|emb|CBI38228.3| unnamed protein product [Vitis vinifera]
Length = 585
Score = 277 bits (709), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 163/428 (38%), Positives = 239/428 (55%), Gaps = 55/428 (12%)
Query: 10 PAAEPFHQRGYA----PGYHSRGYSSGP-----GHETVGGRNRMFYEEEVVFKLLCHLDK 60
P + F QRG P ++ Y+SG E + + ++EV+FK+LC D+
Sbjct: 188 PRVDLFQQRGSVLPPIPS-NTISYASGSRPLSINTERISTLDPKTSQQEVIFKILCSNDR 246
Query: 61 VGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMRHSPAQDAVMRVH 120
VG +IGKGG+IV+ QNE GASI + + + +ER++ I+A EN E R+SPAQ+ V+ V
Sbjct: 247 VGGVIGKGGTIVKALQNEAGASISVGAPVAECDERLITITASENPESRYSPAQNGVILVF 306
Query: 121 SRIAEIGFEPGQA-------VVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKD 173
+R E G E G V ARL+V S Q+GCL+G+GG I+SEMR+A+GA IR+ D
Sbjct: 307 NRSIEAGIEKGLDSGSKGSPVSARLVVPSNQVGCLMGKGGTIISEMRKASGAGIRIIGSD 366
Query: 174 QAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKRPGPNNGHSYLPPFPEMPP 233
Q P+C S +D++VQ+ G + +VQD L+HIT RLR+ +FP K NG
Sbjct: 367 QVPKCASENDQVVQISGEFVNVQDGLYHITGRLRDNLFPSKTL---NGAGIRSSSAMNEI 423
Query: 234 PPFRPRHNPASPGSYPSPVGPFHSMDRGMGPSQPFDHQAAFSHGMDPMVPPNSDRIPFPY 293
P+ +PAS G + S +G S F + MD +
Sbjct: 424 SPYGRVRDPASFGLHSS-----------VGVSPSFSRHTTLTQSMDHL------------ 460
Query: 294 GSERPGHGPTFDRPPSPRSWTPQGVGGGDPRGFDASSGFTPRNRPVESGNHAAILTSTTI 353
G + D P SPR W Q V G +PR + SG+ +AI+T+TT+
Sbjct: 461 -----GLSHSLDHPTSPRLWPSQTVTGVNPRNIKGGI-------ELGSGSKSAIITNTTV 508
Query: 354 EVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATEGVVMVSGTSDQMRAAQSL 413
E+VIP+ + VYGEN +NL+ +R+ISGA V +++P+PG ++ +V++SGT D+ +AAQSL
Sbjct: 509 EIVIPENVIGSVYGENGNNLARLRKISGAKVTLHEPRPGTSDRIVIISGTPDETQAAQSL 568
Query: 414 IHAFILCG 421
+ AFI G
Sbjct: 569 LQAFIHTG 576
>gi|147789223|emb|CAN69138.1| hypothetical protein VITISV_022038 [Vitis vinifera]
Length = 569
Score = 276 bits (706), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 163/428 (38%), Positives = 239/428 (55%), Gaps = 55/428 (12%)
Query: 10 PAAEPFHQRGYA----PGYHSRGYSSGP-----GHETVGGRNRMFYEEEVVFKLLCHLDK 60
P + F QRG P ++ Y+SG E + + ++EV+FK+LC D+
Sbjct: 172 PRVDLFQQRGSVLPPIPS-NTISYASGSRPLSINTERISTLDPKTSQQEVIFKILCSNDR 230
Query: 61 VGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMRHSPAQDAVMRVH 120
VG +IGKGG+IV+ QNE GASI + + + +ER++ I+A EN E R+SPAQ+ V+ V
Sbjct: 231 VGGVIGKGGTIVKALQNEAGASISVGAPVAECDERLITITASENPESRYSPAQNGVILVF 290
Query: 121 SRIAEIGFEPG-------QAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKD 173
+R E G E G V ARL+V S Q+GCL+G+GG I+SEMR+A+GA IR+ D
Sbjct: 291 NRSIEAGIEKGLDSGSKGSPVSARLVVPSNQVGCLMGKGGTIISEMRKASGAGIRIIGSD 350
Query: 174 QAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKRPGPNNGHSYLPPFPEMPP 233
Q P+C S +D++VQ+ G + +VQD L+HIT RLR+ +FP K NG
Sbjct: 351 QVPKCASENDQVVQISGEFVNVQDGLYHITGRLRDNLFPSKTL---NGAGIRSSSAMNEI 407
Query: 234 PPFRPRHNPASPGSYPSPVGPFHSMDRGMGPSQPFDHQAAFSHGMDPMVPPNSDRIPFPY 293
P+ +PAS G + S +G S F + MD +
Sbjct: 408 SPYGRVRDPASFGLHSS-----------VGVSPSFSRHTTLTQSMDHL------------ 444
Query: 294 GSERPGHGPTFDRPPSPRSWTPQGVGGGDPRGFDASSGFTPRNRPVESGNHAAILTSTTI 353
G + D P SPR W Q V G +PR + SG+ +AI+T+TT+
Sbjct: 445 -----GLSHSLDHPTSPRLWPSQTVTGVNPRNIKGGI-------ELGSGSKSAIITNTTV 492
Query: 354 EVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATEGVVMVSGTSDQMRAAQSL 413
E+VIP+ + VYGEN +NL+ +R+ISGA V +++P+PG ++ +V++SGT D+ +AAQSL
Sbjct: 493 EIVIPENVIGSVYGENGNNLARLRKISGAKVTLHEPRPGTSDRIVIISGTPDETQAAQSL 552
Query: 414 IHAFILCG 421
+ AFI G
Sbjct: 553 LQAFIHTG 560
>gi|449438568|ref|XP_004137060.1| PREDICTED: KH domain-containing protein At4g18375-like [Cucumis
sativus]
Length = 658
Score = 272 bits (696), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 155/387 (40%), Positives = 224/387 (57%), Gaps = 43/387 (11%)
Query: 47 EEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSE 106
+++VVFK+LC D++G +IGKGG+IVR QNE+GA++ + + +ER++ I+A EN E
Sbjct: 301 QQDVVFKILCANDRIGGVIGKGGTIVRALQNESGATVSVGPSVTGCDERLISITASENIE 360
Query: 107 MRHSPAQDAVMRVHSRIAEIGFEPGQA-------VVARLLVHSQQIGCLLGRGGHIVSEM 159
R+SPAQ AV+ V SR ++ E Q VVARL+V S Q+GC+LG+GG I+SE+
Sbjct: 361 SRYSPAQKAVVLVFSRSVDVAIEKWQESSSKGSPVVARLVVPSNQVGCVLGKGGVIISEI 420
Query: 160 RRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFP--MKRPG 217
R+ TG +IR+ DQ P C + DEIVQ+ G + +VQDAL+++T RLR+ +F + G
Sbjct: 421 RKVTGTNIRIISSDQVPNCAAESDEIVQISGEFSNVQDALYNVTGRLRDNLFSSVLSNSG 480
Query: 218 PNNGHSYLPPFPEMPPPPFRPRHNPASPGSYPSPVGPFHSMDRGMGPSQPFDHQAAFSHG 277
NG +PE P R +P +PVG H H A S
Sbjct: 481 TRNGGGT-SVYPETSP---YGRVRDTAPLVRSTPVGTSH--------GSFMQHSTAQS-- 526
Query: 278 MDPMVPPNSDRIPFPYGSERPGHGPTFDRPPSPRSWTPQGVGGGDPRGF-DASSGFTPRN 336
S+ G + D P SP W PQ + G R DA G
Sbjct: 527 -----------------SDDLGLSHSLDSPSSPGLWPPQSLSGISSRAISDAGRGLPSHR 569
Query: 337 RPVE--SGNHAAILTSTTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGAT 394
V+ SGN AI+T+TT+E+V+P ++ VYGEN +NL+ +RQISGA V+V++P P +
Sbjct: 570 SGVQLGSGNKTAIVTNTTVEIVVPDDVISLVYGENGTNLTRLRQISGAKVIVHEPDPITS 629
Query: 395 EGVVMVSGTSDQMRAAQSLIHAFILCG 421
+ ++++SGT D+ +AAQSL+HAFIL G
Sbjct: 630 DRLIVISGTPDETQAAQSLLHAFILTG 656
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 106/411 (25%), Positives = 173/411 (42%), Gaps = 70/411 (17%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVI---------- 99
V F++LCH ++G +IGK G +++ Q TG I++ + +S +R+V +
Sbjct: 53 VAFRMLCHASRIGGVIGKSGFVIKQLQQSTGVKIRVEEAPSESPDRVVTVIGSPALTSRV 112
Query: 100 -----SARENSEMRHSPAQDAVMRVHSRIAEIGFE--------PGQAVVARLLVHSQQIG 146
S E+ S AQ+ +++V RI E+ E V RLL Q+G
Sbjct: 113 FLEQNSGASGEEVEASKAQEGLLKVFERILEVAAEIEGVEVGAEVGVVYCRLLADVAQVG 172
Query: 147 CLLGRGGHIVSEMRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRL 206
++G+GG +V ++R+ +G IRV D+ P C P DE++++ G+ +++ AL ++ RL
Sbjct: 173 SVIGKGGKVVEKIRKESGCRIRVL-TDKLPACAGPSDEMIEIEGDVWAIKKALLAVSRRL 231
Query: 207 RETIFPMK---RPGPNNGHSYLPPFPEMPPPPFRPRHNPASPGSYPSPVGPFHSM--DRG 261
++ K RP H LP M R P P S HS+ D
Sbjct: 232 QDCPPSEKRTVRPAEAVIHETLPDL-HMDHILQRNSVLPILPSSSNIFASGIHSLSIDAD 290
Query: 262 MGPSQPFDHQAAFSHGMDPMVPPNSDRIPFPYGSERPGHGPTFDRPPSPRSWTPQGVG-- 319
M P P D A + ++ N DRI G G T R S VG
Sbjct: 291 MLP--PVDTNVAQQDVVFKILCAN-DRIGGVI-----GKGGTIVRALQNESGATVSVGPS 342
Query: 320 --GGDPR--GFDASSGFTPRNRPVESGNHAAILTSTTIEV-------------------V 356
G D R AS R P + ++ S +++V V
Sbjct: 343 VTGCDERLISITASENIESRYSPAQKA--VVLVFSRSVDVAIEKWQESSSKGSPVVARLV 400
Query: 357 IPQLYMAHVYGENNSNLSHIRQISGAN--VVVNDPKPGA---TEGVVMVSG 402
+P + V G+ +S IR+++G N ++ +D P ++ +V +SG
Sbjct: 401 VPSNQVGCVLGKGGVIISEIRKVTGTNIRIISSDQVPNCAAESDEIVQISG 451
>gi|356546743|ref|XP_003541782.1| PREDICTED: poly(rC)-binding protein 3-like [Glycine max]
Length = 663
Score = 270 bits (690), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 155/388 (39%), Positives = 228/388 (58%), Gaps = 44/388 (11%)
Query: 46 YEEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENS 105
++EV F++LC D+VG +IGKGG+IVR Q+ETGA+I I ++ + E+R++ I+A EN
Sbjct: 307 LQQEVSFRILCSNDRVGGVIGKGGNIVRALQSETGATISIGPLVAECEDRLITIAASENP 366
Query: 106 EMRHSPAQDAVMRVHSRIAEIGFEP--------GQAVVARLLVHSQQIGCLLGRGGHIVS 157
E R+SPAQ A + V SR E+GFE G V RL+V S Q+GCL+G+GG IVS
Sbjct: 367 ESRYSPAQKAAVLVFSRSIEVGFEKELDSGLNKGSTVTVRLVVPSSQVGCLIGKGGVIVS 426
Query: 158 EMRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKRPG 217
E+R+ATGA+IR+ DQ P+C S +D++VQ+ G + SVQDAL++ T RLR+ +F +
Sbjct: 427 EIRKATGANIRIIGTDQVPKCASDNDQVVQISGEFSSVQDALYNATGRLRDNLFVSTQ-- 484
Query: 218 PNNGHSYLPPFPEMPPPPFRPRHNPASPGSYPSPVGPFHSMDRGMGPSQPFDHQAAFSHG 277
N+ + + P+ + + GS P H + R H F+ G
Sbjct: 485 -NSAGTRSLSSLRVDTSPYGIQQDFVPHGSQL-PATTSHCLSR---------H--TFAQG 531
Query: 278 MDPMVPPNSDRIPFPYGSERPGHGPTFDRPPSPRSWTPQ-GVGGGDPRGF-DASSGFTPR 335
+D + G D P SP WT + G + R D S G T R
Sbjct: 532 IDHL-----------------GLSRNLDHPSSPGLWTRNLDLAGINSRSINDFSLGLTSR 574
Query: 336 NRPVE--SGNHAAILTSTTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGA 393
+E SG+ +AI+T+TT+E+V+P + VYGEN NL +RQISGA VV+++P+PG
Sbjct: 575 KGGLELVSGSKSAIVTNTTVEIVVPDDTIDCVYGENGRNLVRLRQISGAKVVIHEPRPGT 634
Query: 394 TEGVVMVSGTSDQMRAAQSLIHAFILCG 421
++ ++++SGT D+ +AAQSL+ AFIL G
Sbjct: 635 SDRIIVISGTPDETQAAQSLLQAFILSG 662
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 61/175 (34%), Positives = 102/175 (58%), Gaps = 17/175 (9%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISA-------- 101
V F+LLC+ ++G +IGK GS+++T Q TGA I+I D +S +R++++ A
Sbjct: 45 VAFRLLCNASRIGGVIGKSGSVIKTLQQSTGAKIRIEDAPQESPDRVILVIADAALSCKV 104
Query: 102 --RENSEMRHSPAQDAVMRVHSRIAEI-----GFEPGQAVVA-RLLVHSQQIGCLLGRGG 153
R + S AQ+A+++V RI E+ G + G V++ RL+ S Q G ++G+GG
Sbjct: 105 LLRNEEVVEVSKAQEALLKVFDRILEVAAEMEGVDVGDRVMSCRLVADSAQAGSVIGKGG 164
Query: 154 HIVSEMRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRE 208
+V +++ TG IRV D P C S DE++++ G SV+ AL ++ RL++
Sbjct: 165 KVVERIKKETGCKIRVLT-DDLPLCASASDEMIEIEGRVSSVKKALVAVSQRLQD 218
>gi|124359392|gb|ABN05856.1| KH, type 1 [Medicago truncatula]
Length = 564
Score = 264 bits (674), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 158/438 (36%), Positives = 242/438 (55%), Gaps = 62/438 (14%)
Query: 46 YEEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENS 105
+++E+ FK++C D++G +IGKGG+I+R Q+ETGA++ + + + E+R++ I+A E+
Sbjct: 125 HQQEITFKIICSNDRIGGVIGKGGNIIRALQSETGATVSVGPSVAECEDRLITITASESP 184
Query: 106 EMRHSPAQDAVMRVHSRIAEIGFEPG--------QAVVARLLVHSQQIGCLLGRGGHIVS 157
E R+SPAQ A + V SR E G E G +V A+L+V S Q+GCLLG+GG IVS
Sbjct: 185 ESRYSPAQKATVLVFSRSVEAGIEKGIDSGLNTGSSVTAQLVVSSNQVGCLLGKGGVIVS 244
Query: 158 EMRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIF--PMKR 215
EMR+ATGASIR+ D+ +C S +D++VQ+ G + +VQDAL++ T RLR+ +F +K
Sbjct: 245 EMRKATGASIRIVGTDKVSKCASDNDQVVQISGEFSNVQDALYNATGRLRDNLFGGTLKS 304
Query: 216 PGP---NNGHSYLPPFPEMPPPPF--------------RPRHNP-ASPGSYPSPVGPFHS 257
G ++ S P+ + P R R P S + P+
Sbjct: 305 AGTRSLSSVQSDTSPYGRLRDVPLGSQSSLRADTNAFVRLRDVPLVGQSSLQADTSPYVR 364
Query: 258 M-DRGMGPSQ---------------PFDHQAAFSHGMDPM---------------VPPNS 286
+ D +G P Q++ P + +
Sbjct: 365 LRDVSLGGQSSLQSDTSPYGRLRDIPLGGQSSLQSDTSPYGKLRDIPLGGQSAVGISHSL 424
Query: 287 DRIPFPYGSERPGHGPTFDRPPSPRSWTPQGVGGGDPRGF-DASSGFTPRNRPVE--SGN 343
R F G + G +DRP SP WTP V G + +AS G T R +E SG+
Sbjct: 425 SRHTFSQGIDHFSLGRNYDRPSSPGLWTPPRVTGMNSGSINEASWGSTSRKGGLELVSGS 484
Query: 344 HAAILTSTTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATEGVVMVSGT 403
+AI+T+TTIE+V+P+ + VYGEN SNL+ +RQISGA VV+++P+PG ++ +++SG+
Sbjct: 485 KSAIVTNTTIEIVVPEDTLYLVYGENGSNLARLRQISGAKVVIHEPRPGTSDRTIVLSGS 544
Query: 404 SDQMRAAQSLIHAFILCG 421
D+ +AAQSL+ AFIL G
Sbjct: 545 PDETQAAQSLLQAFILNG 562
>gi|449516663|ref|XP_004165366.1| PREDICTED: KH domain-containing protein At4g18375-like [Cucumis
sativus]
Length = 643
Score = 263 bits (672), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 151/385 (39%), Positives = 218/385 (56%), Gaps = 59/385 (15%)
Query: 47 EEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSE 106
+++VVFK+LC D++G +IGKGG+IVR QNE+GA++ + + +ER++ I+A EN E
Sbjct: 306 QQDVVFKILCANDRIGGVIGKGGTIVRALQNESGATVSVGPSVTGCDERLISITASENIE 365
Query: 107 MRHSPAQDAVMRVHSRIAEIGFEPGQA-------VVARLLVHSQQIGCLLGRGGHIVSEM 159
R+SPAQ AV+ V SR ++ E Q VVARL+V S Q+GC+LG+GG I+SE+
Sbjct: 366 SRYSPAQKAVVLVFSRSVDVAIEKWQESSSKGSPVVARLVVPSNQVGCVLGKGGVIISEI 425
Query: 160 RRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKRPGPN 219
R+ TG +IR+ DQ P C + DEIVQ+ G + +VQDAL+++T RLR+ +F
Sbjct: 426 RKVTGTNIRIISSDQVPNCAAESDEIVQISGEFSNVQDALYNVTGRLRDNLF-------- 477
Query: 220 NGHSYLPPFPEMPPPPFRPRHNPASPGSYPSPVGPFHSMDRGMGPSQPFDHQAAFSHGMD 279
L P+ R +P +PVG H H A S
Sbjct: 478 -----LVPY---------GRVRDTAPLVRSTPVGTSH--------GSFMQHSTAQS---- 511
Query: 280 PMVPPNSDRIPFPYGSERPGHGPTFDRPPSPRSWTPQGVGGGDPRGF-DASSGFTPRNRP 338
S+ G + D P SP W PQ + G R DA G
Sbjct: 512 ---------------SDDLGLSHSLDSPSSPGLWPPQSLSGISSRAISDAGRGLPSHRSG 556
Query: 339 VE--SGNHAAILTSTTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATEG 396
V+ SGN AI+T+TT+E+V+P ++ VYGEN +NL+ +RQISGA V+V++P P +
Sbjct: 557 VQLGSGNKTAIVTNTTVEIVVPDDVISLVYGENGTNLTRLRQISGAKVIVHEPDPITNDR 616
Query: 397 VVMVSGTSDQMRAAQSLIHAFILCG 421
++++SGT D+ +AAQSL+HAFIL G
Sbjct: 617 LIVISGTPDETQAAQSLLHAFILTG 641
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 106/411 (25%), Positives = 173/411 (42%), Gaps = 70/411 (17%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVI---------- 99
V F++LCH ++G +IGK G +++ Q TG I++ + +S +R+V +
Sbjct: 58 VAFRMLCHASRIGGVIGKSGFVIKQLQQSTGVKIRVEEAPSESPDRVVTVIGSPALTSRV 117
Query: 100 -----SARENSEMRHSPAQDAVMRVHSRIAEIGFE--------PGQAVVARLLVHSQQIG 146
S E+ S AQ+ +++V RI E+ E V RLL Q+G
Sbjct: 118 FLEQNSGASGEEVEASKAQEGLLKVFERILEVAAEIEGVEVGAEVGVVYCRLLADVAQVG 177
Query: 147 CLLGRGGHIVSEMRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRL 206
++G+GG +V ++R+ +G IRV D+ P C P DE++++ G+ +++ AL ++ RL
Sbjct: 178 SVIGKGGKVVEKIRKESGCRIRVL-TDKLPACAGPSDEMIEIEGDVWAIKKALLAVSRRL 236
Query: 207 RETIFPMK---RPGPNNGHSYLPPFPEMPPPPFRPRHNPASPGSYPSPVGPFHSM--DRG 261
++ K RP H LP M R P P S HS+ D
Sbjct: 237 QDCPPSEKRTVRPAEAVIHETLPDL-HMDHILQRNSVLPILPSSSNIFASGIHSLSIDAD 295
Query: 262 MGPSQPFDHQAAFSHGMDPMVPPNSDRIPFPYGSERPGHGPTFDRPPSPRSWTPQGVG-- 319
M P P D A + ++ N DRI G G T R S VG
Sbjct: 296 MLP--PVDTNVAQQDVVFKILCAN-DRIGGVI-----GKGGTIVRALQNESGATVSVGPS 347
Query: 320 --GGDPR--GFDASSGFTPRNRPVESGNHAAILTSTTIEV-------------------V 356
G D R AS R P + ++ S +++V V
Sbjct: 348 VTGCDERLISITASENIESRYSPAQKA--VVLVFSRSVDVAIEKWQESSSKGSPVVARLV 405
Query: 357 IPQLYMAHVYGENNSNLSHIRQISGAN--VVVNDPKPGA---TEGVVMVSG 402
+P + V G+ +S IR+++G N ++ +D P ++ +V +SG
Sbjct: 406 VPSNQVGCVLGKGGVIISEIRKVTGTNIRIISSDQVPNCAAESDEIVQISG 456
>gi|302142130|emb|CBI19333.3| unnamed protein product [Vitis vinifera]
Length = 672
Score = 263 bits (672), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 181/428 (42%), Positives = 243/428 (56%), Gaps = 31/428 (7%)
Query: 4 QGNPYPPAAEPFHQRGYAPGYHSRGYSSGPGHETVGGRNRMFYEEEVVFKLLCHLDKVGS 63
QG PY P H S PG M ++ + F+LLCH ++VG
Sbjct: 268 QGAPYAAGVRDTDYHSNTPQLHKFHESGMPGW--------MKPQDILTFRLLCHDERVGG 319
Query: 64 LIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMRHSPAQDAVMRVHSRI 123
+IGKGG+I++ QNETG IK+ D +PDSE+R++ IS + + R SPAQDAV+RV SRI
Sbjct: 320 IIGKGGTIIKNLQNETGCEIKVLDGVPDSEDRVIFISGSAHPDDRISPAQDAVLRVQSRI 379
Query: 124 AE-IGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAPRCGSPH 182
I + V+ARLLV S QIGCLLG+GG I++EMR+ +GA IR+ KDQ P+C S +
Sbjct: 380 VRAIPDSKEKTVIARLLVSSTQIGCLLGKGGAIIAEMRKLSGAHIRILGKDQIPKCASEN 439
Query: 183 DEIVQVIGNYHSVQDALFHITSRLRETIFPMKRPGPNNGHSYLPPFPEMPP--PPFRPRH 240
+E+VQ+ G + +VQ+AL IT+RLR F R + H P F + P PP+ R
Sbjct: 440 EEVVQINGEFEAVQEALLQITTRLRHHHF---RDAFSVNHPSNPAFTDQVPPFPPYLARR 496
Query: 241 NPASPGSYPSPVGP-FHSMDRGMGPSQPFDHQAAFSHGMDPMVPPNSDRIPFPYGSERPG 299
+ PG Y S +GP FH D +G P HG P+ DR PF + R G
Sbjct: 497 EFSPPGMY-SNLGPSFHKFD-AVGVLHP--------HG---GFHPHDDRAPFMHSIHRLG 543
Query: 300 HGPTF-DRPPSPRSWTPQG-VGGGDPRGFDASSGFTPRNRP-VESGNHAAILTSTTIEVV 356
P +R PS W QG + GG P G +G R P GN AI+TSTT+EVV
Sbjct: 544 IPPHIPERKPSSAPWGHQGLIEGGVPIGLADFAGGPQRRIPGFGGGNQQAIITSTTVEVV 603
Query: 357 IPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATEGVVMVSGTSDQMRAAQSLIHA 416
+P+ + +YGE+ L IRQIS A + + +PKPGA+E V+++SGT +Q AAQSLI A
Sbjct: 604 VPRSLVPSIYGEDGGCLRQIRQISDAKITITEPKPGASETVIIISGTPEQTHAAQSLIQA 663
Query: 417 FILCGVTS 424
F+L S
Sbjct: 664 FVLSETES 671
Score = 128 bits (321), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 75/217 (34%), Positives = 115/217 (52%), Gaps = 31/217 (14%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVI---------- 99
VVF++LC K GS+IGKGG+I+ + ETG +++ + + +ER+V+I
Sbjct: 45 VVFRVLCPASKTGSVIGKGGTIISQIRQETGVKVRVEETVSGCDERVVLITGSDKDTEAD 104
Query: 100 ---SARENSEMRH--SPAQDAVMRVHSRIAEIGFEPGQ---------AVVARLLVHSQQI 145
S ++S++ S Q A++ V R+AE E V RLLV S Q+
Sbjct: 105 NEQSKEDDSQVEKGISSVQKALLLVFERMAEGESETNGGDEDSNKSPTFVVRLLVLSSQV 164
Query: 146 GCLLGRGGHIVSEMRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSR 205
GCLLG+GG ++ +M +GA IR+ P+D+ P C SP DE+VQ+ G + + AL I+ +
Sbjct: 165 GCLLGKGGSVIKQMSAESGAQIRILPRDKLPLCASPSDELVQITGELDACKQALQSISQQ 224
Query: 206 L-----RETIFPMKRPGPNNGHSYLPPFP--EMPPPP 235
L R+ P ++ H + PP P E PPP
Sbjct: 225 LLENPPRDYDIVSTNPTGSSSHLFGPPLPRSEAQPPP 261
Score = 40.0 bits (92), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Query: 36 ETVGGRNRMFYEEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIA--DILP 90
ET GG V +LL +VG L+GKGGS+++ E+GA I+I D LP
Sbjct: 139 ETNGGDEDSNKSPTFVVRLLVLSSQVGCLLGKGGSVIKQMSAESGAQIRILPRDKLP 195
>gi|225458964|ref|XP_002283591.1| PREDICTED: KH domain-containing protein At4g18375-like [Vitis
vinifera]
Length = 701
Score = 263 bits (672), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 181/428 (42%), Positives = 243/428 (56%), Gaps = 31/428 (7%)
Query: 4 QGNPYPPAAEPFHQRGYAPGYHSRGYSSGPGHETVGGRNRMFYEEEVVFKLLCHLDKVGS 63
QG PY P H S PG M ++ + F+LLCH ++VG
Sbjct: 297 QGAPYAAGVRDTDYHSNTPQLHKFHESGMPGW--------MKPQDILTFRLLCHDERVGG 348
Query: 64 LIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMRHSPAQDAVMRVHSRI 123
+IGKGG+I++ QNETG IK+ D +PDSE+R++ IS + + R SPAQDAV+RV SRI
Sbjct: 349 IIGKGGTIIKNLQNETGCEIKVLDGVPDSEDRVIFISGSAHPDDRISPAQDAVLRVQSRI 408
Query: 124 AE-IGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAPRCGSPH 182
I + V+ARLLV S QIGCLLG+GG I++EMR+ +GA IR+ KDQ P+C S +
Sbjct: 409 VRAIPDSKEKTVIARLLVSSTQIGCLLGKGGAIIAEMRKLSGAHIRILGKDQIPKCASEN 468
Query: 183 DEIVQVIGNYHSVQDALFHITSRLRETIFPMKRPGPNNGHSYLPPFPEMPP--PPFRPRH 240
+E+VQ+ G + +VQ+AL IT+RLR F R + H P F + P PP+ R
Sbjct: 469 EEVVQINGEFEAVQEALLQITTRLRHHHF---RDAFSVNHPSNPAFTDQVPPFPPYLARR 525
Query: 241 NPASPGSYPSPVGP-FHSMDRGMGPSQPFDHQAAFSHGMDPMVPPNSDRIPFPYGSERPG 299
+ PG Y S +GP FH D +G P HG P+ DR PF + R G
Sbjct: 526 EFSPPGMY-SNLGPSFHKFD-AVGVLHP--------HG---GFHPHDDRAPFMHSIHRLG 572
Query: 300 HGPTF-DRPPSPRSWTPQG-VGGGDPRGFDASSGFTPRNRP-VESGNHAAILTSTTIEVV 356
P +R PS W QG + GG P G +G R P GN AI+TSTT+EVV
Sbjct: 573 IPPHIPERKPSSAPWGHQGLIEGGVPIGLADFAGGPQRRIPGFGGGNQQAIITSTTVEVV 632
Query: 357 IPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATEGVVMVSGTSDQMRAAQSLIHA 416
+P+ + +YGE+ L IRQIS A + + +PKPGA+E V+++SGT +Q AAQSLI A
Sbjct: 633 VPRSLVPSIYGEDGGCLRQIRQISDAKITITEPKPGASETVIIISGTPEQTHAAQSLIQA 692
Query: 417 FILCGVTS 424
F+L S
Sbjct: 693 FVLSETES 700
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 76/246 (30%), Positives = 114/246 (46%), Gaps = 60/246 (24%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISAR------- 102
VVF++LC K GS+IGKGG+I+ + ETG +++ + + +ER+V+I+
Sbjct: 45 VVFRVLCPASKTGSVIGKGGTIISQIRQETGVKVRVEETVSGCDERVVLITGSDKDTEAD 104
Query: 103 ------------------------ENSEMRHS-------------PAQDAVMRVHSRIAE 125
EN E + S Q A++ V R+AE
Sbjct: 105 NEQSKEDGEDTKAAEEVSDTKEPGENDEDKESVPVEDSQVEKGISSVQKALLLVFERMAE 164
Query: 126 IGFEPGQ---------AVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAP 176
E V RLLV S Q+GCLLG+GG ++ +M +GA IR+ P+D+ P
Sbjct: 165 GESETNGGDEDSNKSPTFVVRLLVLSSQVGCLLGKGGSVIKQMSAESGAQIRILPRDKLP 224
Query: 177 RCGSPHDEIVQVIGNYHSVQDALFHITSRL-----RETIFPMKRPGPNNGHSYLPPFP-- 229
C SP DE+VQ+ G + + AL I+ +L R+ P ++ H + PP P
Sbjct: 225 LCASPSDELVQITGELDACKQALQSISQQLLENPPRDYDIVSTNPTGSSSHLFGPPLPRS 284
Query: 230 EMPPPP 235
E PPP
Sbjct: 285 EAQPPP 290
Score = 40.0 bits (92), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Query: 36 ETVGGRNRMFYEEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIA--DILP 90
ET GG V +LL +VG L+GKGGS+++ E+GA I+I D LP
Sbjct: 168 ETNGGDEDSNKSPTFVVRLLVLSSQVGCLLGKGGSVIKQMSAESGAQIRILPRDKLP 224
>gi|357445989|ref|XP_003593272.1| Heterogeneous nuclear ribonucleoprotein K [Medicago truncatula]
gi|355482320|gb|AES63523.1| Heterogeneous nuclear ribonucleoprotein K [Medicago truncatula]
Length = 766
Score = 262 bits (670), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 165/470 (35%), Positives = 249/470 (52%), Gaps = 66/470 (14%)
Query: 14 PFHQRGYAPGYHSRGYSSGPGHETVGGRNRMFYEEEVVFKLLCHLDKVGSLIGKGGSIVR 73
P YA G HS V +++E+ FK++C D++G +IGKGG+I+R
Sbjct: 299 PSSSNSYATGVHSLSAEV----NRVSSLEPKAHQQEITFKIICSNDRIGGVIGKGGNIIR 354
Query: 74 TFQNETGASIKIADILPDSEERIVVISARENSEMRHSPAQDAVMRVHSRIAEIGFEPG-- 131
Q+ETGA++ + + + E+R++ I+A E+ E R+SPAQ A + V SR E G E G
Sbjct: 355 ALQSETGATVSVGPSVAECEDRLITITASESPESRYSPAQKATVLVFSRSVEAGIEKGID 414
Query: 132 ------QAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAPRCGSPHDEI 185
+V A+L+V S Q+GCLLG+GG IVSEMR+ATGASIR+ D+ +C S +D++
Sbjct: 415 SGLNTGSSVTAQLVVSSNQVGCLLGKGGVIVSEMRKATGASIRIVGTDKVSKCASDNDQV 474
Query: 186 VQVIGNYHSVQDALFHITSRLRETIF--PMKRPGP---NNGHSYLPPFPEMPPPPF---- 236
VQ+ G + +VQDAL++ T RLR+ +F +K G ++ S P+ + P
Sbjct: 475 VQISGEFSNVQDALYNATGRLRDNLFGGTLKSAGTRSLSSVQSDTSPYGRLRDVPLGSQS 534
Query: 237 ----------RPRHNP-ASPGSYPSPVGPFHSM-DRGMGPSQ---------------PFD 269
R R P S + P+ + D +G P
Sbjct: 535 SLRADTNAFVRLRDVPLVGQSSLQADTSPYVRLRDVSLGGQSSLQSDTSPYGRLRDIPLG 594
Query: 270 HQAAFSHGMDPM---------------VPPNSDRIPFPYGSERPGHGPTFDRPPSPRSWT 314
Q++ P + + R F G + G +DRP SP WT
Sbjct: 595 GQSSLQSDTSPYGKLRDIPLGGQSAVGISHSLSRHTFSQGIDHFSLGRNYDRPSSPGLWT 654
Query: 315 PQGVGGGDPRGF-DASSGFTPRNRPVE--SGNHAAILTSTTIEVVIPQLYMAHVYGENNS 371
P V G + +AS G T R +E SG+ +AI+T+TTIE+V+P+ + VYGEN S
Sbjct: 655 PPRVTGMNSGSINEASWGSTSRKGGLELVSGSKSAIVTNTTIEIVVPEDTLYLVYGENGS 714
Query: 372 NLSHIRQISGANVVVNDPKPGATEGVVMVSGTSDQMRAAQSLIHAFILCG 421
NL+ +RQISGA VV+++P+PG ++ +++SG+ D+ +AAQSL+ AFIL G
Sbjct: 715 NLARLRQISGAKVVIHEPRPGTSDRTIVLSGSPDETQAAQSLLQAFILNG 764
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 59/179 (32%), Positives = 101/179 (56%), Gaps = 21/179 (11%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSE--- 106
V F+LLC+ ++G +IGK G++++ Q TGA I+I D +S +R++++ N +
Sbjct: 48 VAFRLLCNSSRIGGVIGKSGTVIKNLQLTTGAKIRIEDSPNESPDRVIMVIGASNIDGKV 107
Query: 107 -----------MRHSPAQDAVMRVHSRIAEI-----GFEPG-QAVVARLLVHSQQIGCLL 149
+ S AQ+A++RV RI E+ G E G + V RL+ S Q G ++
Sbjct: 108 MVRSHSGDGEAIEVSKAQEALLRVFDRILEVAAEMEGIELGDRTVSCRLVADSAQAGSVI 167
Query: 150 GRGGHIVSEMRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRE 208
G+GG +V ++++ TG I V KD P C S DE++++ G+ SV+ AL ++ L++
Sbjct: 168 GKGGKVVEKIKKDTGCKIWVC-KDNLPACISSPDEVIEIEGSVSSVKKALVAVSRNLQD 225
>gi|224067136|ref|XP_002302373.1| predicted protein [Populus trichocarpa]
gi|222844099|gb|EEE81646.1| predicted protein [Populus trichocarpa]
Length = 680
Score = 261 bits (667), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 166/393 (42%), Positives = 231/393 (58%), Gaps = 35/393 (8%)
Query: 35 HETVGGRNRMFYEEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEE 94
HE+V + + F+LLCH ++VG +IGKGG+I++ + ETG IK+ + + DSE+
Sbjct: 309 HESVIQDQMKPVPDVLTFRLLCHNERVGGVIGKGGTIIKILKQETGCDIKVMEGVSDSED 368
Query: 95 RIVVISARENSEMRHSPAQDAVMRVHSRIAEIGFEPGQAVVARLLVHSQQIGCLLGRGGH 154
R++VIS + + R S QDAV+RV +RIA +A++ARLLV S QIGCLLG+GG
Sbjct: 369 RVIVISGLAHPDDRISAPQDAVIRVQTRIAMAISNKEKAIIARLLVSSNQIGCLLGKGGA 428
Query: 155 IVSEMRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMK 214
I+SEMR+++GA IR+ KDQ P C S + +VQ+ G + V++AL IT+RLR F +
Sbjct: 429 IMSEMRKSSGAYIRILGKDQIPNCASESEGVVQINGEFEVVKEALLQITTRLRHHFF--Q 486
Query: 215 RPGPNNGHSYLPPFPEMPP--PPFRPRHNPASPGSYPSPVGPFHSMDRGMGPSQPFDHQA 272
P+ H P F + P PP+ R SP PFHS FD
Sbjct: 487 NLFPSMDHLSNPAFLDQVPPFPPYMGRKE-LSP--------PFHSFPN-------FDGMV 530
Query: 273 AFSHGMDPMV--PPNSDRIPFPYGSERPGHGPTF-DRPPSPRSWTPQG-VGGGDPRGFDA 328
G P V PP+ D PF + RPG P +R P W PQG V GG P G
Sbjct: 531 ----GAPPHVSFPPHDDHPPFMHNIHRPGMPPHIAERKP----WGPQGFVEGGGPMGLPD 582
Query: 329 SSGFTPRNRPVESG--NHAAILTSTTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVV 386
+G P+ R G +H AI+TSTTIEV++P+ + +YGE+ + L IRQIS A + +
Sbjct: 583 FAG-PPQRRISGFGGVSHPAIITSTTIEVIVPRTIVPVIYGEDGACLKQIRQISDAKITI 641
Query: 387 NDPKPGATEGVVMVSGTSDQMRAAQSLIHAFIL 419
N+PKPGA+E V+++SGT +Q AAQSLI AF++
Sbjct: 642 NEPKPGASETVIIISGTPEQTHAAQSLIQAFVM 674
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 103/213 (48%), Gaps = 54/213 (25%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVIS-ARENSEM- 107
VVF++LC K+G++ G+GG+++ + ETGA + + + +P +E+I+VI+ + E +E+
Sbjct: 45 VVFRILCPAPKIGTVTGEGGAVISQIRQETGAKVIVEENIPGCDEQIIVITGSDEKTEVS 104
Query: 108 -------------------------------------------RHSPAQDAVMRVHSRIA 124
S Q A++ V ++
Sbjct: 105 IEQSKKDGDEEANVAEESDNKNDGNEKEEEKEGVPVEDSGTVKETSSMQKALLLVSGKMF 164
Query: 125 EI------GFEPGQ---AVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQA 175
E G E + RLLV S Q+GCLLG+GG ++ +M +GA IR+ P+D+
Sbjct: 165 EADPVTDGGDEENNKPSTFILRLLVLSSQVGCLLGKGGSVIKQMSAESGAQIRISPRDRL 224
Query: 176 PRCGSPHDEIVQVIGNYHSVQDALFHITSRLRE 208
P C S DE+V++ G +V+ AL ++ +L E
Sbjct: 225 PICSSVSDELVEITGEIDAVRKALQSVSKQLLE 257
Score = 41.2 bits (95), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 21/82 (25%), Positives = 44/82 (53%), Gaps = 5/82 (6%)
Query: 329 SSGFTPRNRPVESGNHAAILTSTTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVND 388
++G N+P++S A + ++ P + V GE + +S IRQ +GA V+V +
Sbjct: 28 TAGTNSPNQPLKSSPAAVVF-----RILCPAPKIGTVTGEGGAVISQIRQETGAKVIVEE 82
Query: 389 PKPGATEGVVMVSGTSDQMRAA 410
PG E +++++G+ ++ +
Sbjct: 83 NIPGCDEQIIVITGSDEKTEVS 104
Score = 38.1 bits (87), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 40/67 (59%), Gaps = 5/67 (7%)
Query: 133 AVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNY 192
AVV R+L + +IG + G GG ++S++R+ TGA +V ++ P C ++I+ + G+
Sbjct: 44 AVVFRILCPAPKIGTVTGEGGAVISQIRQETGA--KVIVEENIPGC---DEQIIVITGSD 98
Query: 193 HSVQDAL 199
+ ++
Sbjct: 99 EKTEVSI 105
>gi|224141139|ref|XP_002323932.1| predicted protein [Populus trichocarpa]
gi|222866934|gb|EEF04065.1| predicted protein [Populus trichocarpa]
Length = 722
Score = 253 bits (647), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 155/424 (36%), Positives = 237/424 (55%), Gaps = 51/424 (12%)
Query: 48 EEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEM 107
+++VF++LC D++G +IGKGG+IVR QNETGA+I + + + +ER++ ++A EN E
Sbjct: 298 QQLVFRILCTTDRIGGVIGKGGNIVRALQNETGAAISVGPTVSECDERLITVTASENPES 357
Query: 108 RHSPAQDAVMRVHSRIAEIGFEP--------GQAVVARLLVHSQQIGCLLGRGGHIVSEM 159
R+S AQ ++ V SR E G E G V ARL+V Q+GCLLG+GG I+SEM
Sbjct: 358 RYSAAQKTIVLVFSRAVESGIEKGLDPGSSRGSPVTARLVVSPSQVGCLLGKGGTIISEM 417
Query: 160 RRATGASIRVFPKDQA-PRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFP--MKRP 216
R+AT SIR+ DQ P+C D +V++ G++ +V+DA++H+T RLR+ +F + P
Sbjct: 418 RKATSTSIRIIVGDQRNPKCVPETDHVVEISGDFVNVKDAIYHVTGRLRDNLFSGMLSTP 477
Query: 217 GPNNGHSYLP---PFPEMPPP----PFRPRHNPASPGSYPSPV-----GPFHSMDRG--M 262
G + S L P+ ++ P + P +P ++ P+ PF R
Sbjct: 478 GARSNSSVLAEISPYVKLMDPVRDSSWEPVRDPLR-DAFRDPLREPVRDPFRETVRDPFR 536
Query: 263 GPSQ-PFDH--QAAFSHGM-DPMVPPNSDRIPF------------------PYGSERPGH 300
P + PF + F + DP+ P D P+ + G
Sbjct: 537 EPVRDPFREPVRDLFREPVRDPLREPARDSAPYIMQPTPGNSHNLSRQTVITQNMDHLGL 596
Query: 301 GPTFDRPPSPRSWTPQGVGGGDPRGFDASSGFTPRNRP---VESGNHAAILTSTTIEVVI 357
+ DRPPSPR W Q + +PRG S P + + SG +A +T+TT+E+V+
Sbjct: 597 SHSLDRPPSPRLWASQTIPRVNPRGISDVSRRLPSLKAGLELGSGGKSAFVTNTTVEIVV 656
Query: 358 PQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATEGVVMVSGTSDQMRAAQSLIHAF 417
P+ VYGEN SNL+ +RQISGA V+V++P+ G ++ +V++SGT D+ +AAQSL+ AF
Sbjct: 657 PENAFGSVYGENGSNLARLRQISGAKVIVHEPRLGTSDRIVVISGTPDETQAAQSLLQAF 716
Query: 418 ILCG 421
IL G
Sbjct: 717 ILTG 720
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 98/173 (56%), Gaps = 15/173 (8%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIV----------VI 99
V F+LLCH ++G +IGK G+I++ Q +TGA ++I D DS +R++ V+
Sbjct: 36 VSFRLLCHASRIGGVIGKAGNIIKGLQQQTGAKVRIEDAPSDSPDRVITVIGPITQSAVV 95
Query: 100 SARENSEMRHSPAQDAVMRVHSRIAEIGFEPGQ----AVVARLLVHSQQIGCLLGRGGHI 155
+R S + S Q+A++RV RI E+ E V R+L +G ++G+GG +
Sbjct: 96 FSRIESAVEVSKGQEALVRVFERILEVAAESDSVADGVVSCRMLAEVSSVGAVIGKGGKV 155
Query: 156 VSEMRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRE 208
V ++R+ G I+V D+ P C + ++E++++ G+ +V+ L ++ L++
Sbjct: 156 VEKIRKDCGCRIKVL-VDKLPDCAASNEEMIEIEGDVSAVKKGLVAVSRCLQD 207
>gi|255563372|ref|XP_002522689.1| Poly(rC)-binding protein, putative [Ricinus communis]
gi|223538165|gb|EEF39776.1| Poly(rC)-binding protein, putative [Ricinus communis]
Length = 698
Score = 252 bits (644), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 152/416 (36%), Positives = 237/416 (56%), Gaps = 59/416 (14%)
Query: 45 FYEEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISAREN 104
+++EVVFK+LC D VG +IGKGG+I++ QNETGASI I + +S+ER++ + A EN
Sbjct: 300 LFQQEVVFKILCPNDMVGGVIGKGGTIIKALQNETGASITIGATIAESDERLITVIASEN 359
Query: 105 SEMRHSPAQDAVMRVHSRIAEIGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATG 164
E R+S AQ AV+ V SR L+V S Q+GCLLG+GG I+S+MR+ TG
Sbjct: 360 PESRYSAAQKAVVLVFSR---------------LVVPSNQVGCLLGKGGIIISDMRKTTG 404
Query: 165 ASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKRPGPNNGHSY 224
SI++ DQ P+C ++++VQ+ G++ +V+DA++H+T RLR+ +F P +
Sbjct: 405 TSIKILAGDQLPKCVPENEQVVQISGDFMNVKDAVYHVTGRLRDNLFSSALSTPVTRSTT 464
Query: 225 L----PPFPEMPPPPFRPRHNPASPGSYPSPVG-----PFHSMDRG-MGPSQPFDHQAAF 274
+ P+ + P P + ++ P+G P + RG + ++ + +F
Sbjct: 465 VITEASPYGRLKEPLRDAFKEPLN--TFREPLGDAFRDPLRAAMRGPLRDARRDPLRDSF 522
Query: 275 SHGMDPMV------PPNSDRIPFPYGSERP--------------------GHGPTFDRPP 308
+ + PP R P PY P G + D P
Sbjct: 523 GDTLRDQLRDTLKEPP---RGPAPYNLHPPIGVSHSLNRHNTLTQSMDHLGLSHSLDGPI 579
Query: 309 SPRSWTPQGVGGGDPRGF-DASSGFTPRNRPVE--SGNHAAILTSTTIEVVIPQLYMAHV 365
SPR W Q + G +PR DAS GFT +E SG+ +AI+T+TT+E+ +P+ + V
Sbjct: 580 SPRLWASQTMAGINPRVVPDASRGFTSFKGGLELGSGSKSAIVTNTTVEIRVPENVIGSV 639
Query: 366 YGENNSNLSHIRQISGANVVVNDPKPGATEGVVMVSGTSDQMRAAQSLIHAFILCG 421
YGEN+SNL+ +RQISGA V+V++P+ G+++ ++++SGT D+ +AAQSL+ AFIL G
Sbjct: 640 YGENDSNLTRLRQISGAKVIVHEPRLGSSDRIIVISGTPDETQAAQSLLQAFILTG 695
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 111/206 (53%), Gaps = 21/206 (10%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISAR------- 102
V F+LLCH ++G +IGK G+I++ Q ++GA I+I + +S +R++ + A
Sbjct: 56 VSFRLLCHASRIGGIIGKSGTIIKQLQQQSGAKIRIEESPAESSDRVITVIAEGQIVSKV 115
Query: 103 --ENSEMRHSPAQDAVMRVHSRIAEIGFEPG---------QAVVARLLVHSQQIGCLLGR 151
E+ E+ S AQ+ ++RV RI E+ E V R+L S+Q G ++G+
Sbjct: 116 RVESEEVDVSRAQEGLIRVFERILEVAAESDGINVVAGGGGVVSCRMLAGSKQAGSVIGK 175
Query: 152 GGHIVSEMRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIF 211
GG +V ++R+ G IRV D+ P C P++E++++ G+ SV+ AL + SR +
Sbjct: 176 GGKVVEKIRKDCGVKIRVL-TDKLPVCAGPNEEMIEIEGDILSVKKALIAV-SRCLQDCQ 233
Query: 212 PMKRPGPNNGHSYLPPFPEMPPPPFR 237
P+ +P + Y P+ P P R
Sbjct: 234 PVDKPRVGSSK-YFEAVPQEPLPEMR 258
>gi|449436912|ref|XP_004136236.1| PREDICTED: KH domain-containing protein At4g18375-like [Cucumis
sativus]
gi|449522219|ref|XP_004168125.1| PREDICTED: KH domain-containing protein At4g18375-like [Cucumis
sativus]
Length = 693
Score = 248 bits (632), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 156/381 (40%), Positives = 219/381 (57%), Gaps = 28/381 (7%)
Query: 48 EEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEM 107
E + ++LLC ++VG++IGKGG+IV+T Q +TG IK+ D DSE+RI++++ + +
Sbjct: 336 EILSYRLLCPTERVGNVIGKGGAIVKTLQQDTGCDIKVVDGALDSEDRIILVAGPAHPDD 395
Query: 108 RHSPAQDAVMRVHSRIAEIGFEPG-QAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGAS 166
R SP QDAV RV +RI + + Q +VAR LV S QIGCLLG+GG I++EMR++TGA
Sbjct: 396 RISPVQDAVFRVQARIVKAAADSKEQNLVARFLVSSNQIGCLLGKGGSIIAEMRKSTGAY 455
Query: 167 IRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKRPGPNNGHSYLP 226
IR+ K+Q P+C +E+VQ+ G +VQDA+F IT+RLR F P N+ HS P
Sbjct: 456 IRILGKEQIPKCAGEDEEVVQINGEPETVQDAMFQITTRLRHHFFRDAFPSVNS-HSN-P 513
Query: 227 PFPEMPP--PPFRPRHNPASPGSYPSPVGP-FHSMDRGMGPSQPFDHQAAFSHGMDPMVP 283
F + P P + R + PG Y S +GP FH D A S G+ +
Sbjct: 514 AFIDRLPSFPSYFGRRELSPPGIY-SSLGPSFHKFD-------------ALS-GIPSLSD 558
Query: 284 PNSDRIPFPYGSERPGHGPTFDRPPSPRSWTPQGVGGGDPRGFDASSGFTPRNRPVESGN 343
DR PF + RPG DR P W+ QG+ G D + R GN
Sbjct: 559 LRDDRPPFLH---RPGAPLLSDRKP----WSSQGLVEGGVGLSDFAGAHHRRIAGFGGGN 611
Query: 344 HAAILTSTTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATEGVVMVSGT 403
AI+TSTT+EVV+P+ + + GEN L IRQIS A + + +PK G E ++++SGT
Sbjct: 612 SPAIITSTTVEVVVPRNIVPVICGENGECLKQIRQISDAKITITEPKQGDVETMIIISGT 671
Query: 404 SDQMRAAQSLIHAFILCGVTS 424
+Q AAQSLI AF++ S
Sbjct: 672 PEQTHAAQSLIQAFVISETES 692
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 67/255 (26%), Positives = 111/255 (43%), Gaps = 65/255 (25%)
Query: 20 YAPGYHSRGYSS------GPGHETVGGRNRMFYEEEV-----VFKLLCHLDKVGSLIGKG 68
P SR SS G ++ G R+R ++ VF++L + ++ SL+G+
Sbjct: 5 LTPSKRSRDRSSVKSNGKGKWQKSSGSRSRRNQSFKLSPGYAVFRVLFPVSRIDSLVGRD 64
Query: 69 GSIVRTFQNETGASIKIADILPDSEERIVVISA----------------RENSEMRHS-- 110
G + + ETG I++ D +P +ERI VI +NSE+ +
Sbjct: 65 GDGLSKIREETGVEIRVEDTIPGCDERIAVIGGSNQETEVNPEKKSKEDNKNSEVEENDG 124
Query: 111 --------------PAQDAVMR--VHSRIAEIGFEPGQAV-------------------- 134
P +DA + HS++ + F + +
Sbjct: 125 DIAKLKKKEDKDSPPVEDAKQKEVTHSQLRKALFLVSEKIFDEEPEADGTDVEGDKLPTF 184
Query: 135 VARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHS 194
+ RLLV S Q+GCLLG+GG +V +M +GA IR+ P+D+ P + + E+VQ+ G
Sbjct: 185 ILRLLVLSSQVGCLLGKGGSVVKQMSSDSGAQIRILPRDKLPPFVATNVELVQISGGIDV 244
Query: 195 VQDALFHITSRLRET 209
V+ AL + +L E
Sbjct: 245 VKKALELVFQQLIEN 259
>gi|22328051|ref|NP_201244.2| HEN4 isoform 2 [Arabidopsis thaliana]
gi|332010501|gb|AED97884.1| HEN4 isoform 2 [Arabidopsis thaliana]
Length = 857
Score = 245 bits (625), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 154/407 (37%), Positives = 231/407 (56%), Gaps = 37/407 (9%)
Query: 48 EEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEM 107
++VVFK+LC + G +IG GG +VR +ETGA I + + L D EER++ ++A EN E
Sbjct: 450 QDVVFKILCSTENAGGVIGTGGKVVRMLHSETGAFINVGNTLDDCEERLIAVTASENPEC 509
Query: 108 RHSPAQDAVMRVHSRIAEIGFE------PGQAVVARLLVHSQQIGCLLGRGGHIVSEMRR 161
+ SPAQ A+M + SR+ E+ P ++ ARL+V + QIGC+LG+GG IVSEMR+
Sbjct: 510 QSSPAQKAIMLIFSRLFELATNKILDNGPRSSITARLVVPTSQIGCVLGKGGVIVSEMRK 569
Query: 162 ATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIF--PMKRPGPN 219
TGA+I++ +Q P+C S +D++VQ+ G + +V++A+FHITSRLR+++F MK
Sbjct: 570 TTGAAIQILKVEQNPKCISENDQVVQITGEFPNVREAIFHITSRLRDSVFSNSMK----- 624
Query: 220 NGHSYLPPFPEMPPPPFRPRH--NPASPGSYPS---PVGPFHSMDRGMGPSQPFDHQAAF 274
+S + F R NP S GS+ S P S+ R S ++
Sbjct: 625 --NSLAKSSSALTTERFYDRQSDNPLSIGSHQSVSNPATNSSSLHRRSEDSFLSGSHSSV 682
Query: 275 SH----GMDPMVPPNS---DRI-PFPYGSERPGHGPTFDRPPSPRSWT--PQGVGG---- 320
++ G DP + P DR P S G T D + T P +
Sbjct: 683 NYSRSVGTDPYIRPEDPFPDRFNPSAGYSHNFGRRFTMDHSDNSHHLTEAPSRLWASPPP 742
Query: 321 GDPRGFDASSGFTPRNRP---VESGNHAAILTSTTIEVVIPQLYMAHVYGENNSNLSHIR 377
PRG +SG R + SG+ +AI+T+TT+E+ +P M+ VYGE NL +R
Sbjct: 743 AAPRGLSDASGGLSSARAGHVLGSGHKSAIVTNTTVEIRVPANAMSFVYGEQGYNLEQLR 802
Query: 378 QISGANVVVNDPKPGATEGVVMVSGTSDQMRAAQSLIHAFILCGVTS 424
QISGA V++++P G ++ ++++SGT DQ +AAQ+L+HAFIL G TS
Sbjct: 803 QISGARVIIHEPPLGTSDRIIVISGTPDQTQAAQNLLHAFILTGETS 849
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 91/177 (51%), Gaps = 24/177 (13%)
Query: 52 FKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMR--- 108
F+LLC L VG++IGK G++++ Q TGA I++ + S +R++ I A+ +S+ R
Sbjct: 49 FRLLCPLSHVGAVIGKSGNVIKQLQQSTGAKIRVEEPPSGSPDRVITIIAQADSKSRVKL 108
Query: 109 ------------------HSPAQDAVMRVHSRIAEIGFEPGQAVVARLLVHSQQIGCLLG 150
S AQ A+++V +A VV RLL S G ++G
Sbjct: 109 GANNNGNAEGEKKEEEVEVSKAQGALIKVFELLA--AEADSDTVVCRLLTESSHAGAVIG 166
Query: 151 RGGHIVSEMRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLR 207
+GG +V +R+ TG I + ++ P C DE+V+V GN +V+ AL I+ L+
Sbjct: 167 KGGQMVGSIRKETGCKISIRIEN-LPICADTDDEMVEVEGNAIAVKKALVSISRCLQ 222
>gi|297794027|ref|XP_002864898.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297310733|gb|EFH41157.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 865
Score = 244 bits (623), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 154/411 (37%), Positives = 232/411 (56%), Gaps = 45/411 (10%)
Query: 48 EEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEM 107
++VVFK+LC + G +IG GG +VR +ETGA I + + L D EER++ ++A EN E
Sbjct: 458 QDVVFKILCSTENAGGVIGSGGKVVRMLHSETGAFINVGNTLADCEERLIAVTAPENPEC 517
Query: 108 RHSPAQDAVMRVHSRIAEIGFE------PGQAVVARLLVHSQQIGCLLGRGGHIVSEMRR 161
+ SPAQ A+M + SR+ E+ + P ++ ARL+V + QIGC+LG+GG IVSEMR+
Sbjct: 518 QSSPAQKAIMLLFSRLFELSTKKILDNGPRTSITARLVVPTSQIGCVLGKGGVIVSEMRK 577
Query: 162 ATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKRPGPNNG 221
TGA+I++ +Q P+C S +D+++Q+ G + +V++A+FHITSRLR+++F
Sbjct: 578 TTGATIQILKVEQNPKCVSENDQVIQITGEFPNVREAIFHITSRLRDSVFSNSMKNSITK 637
Query: 222 HSYLPPFPEMPPPPFRPRHNPASPGSYPSPVGP---FHSMDRGMGPSQPFDHQAAFSH-- 276
S + R NP S GS+ S P S+ R S ++ ++
Sbjct: 638 SSSALTTERI---YHRQSDNPLSIGSHQSVSNPPTNSSSLHRRSEDSFLSGSHSSVNYSR 694
Query: 277 --GMDPMVPPNSDRIPFP-YGSERPGHGPTFDRPPS--------------PRSWT---PQ 316
G DP V P PFP + G+ P F R + R W P
Sbjct: 695 PVGTDPYVRPED---PFPDRFNPSAGYSPNFGRRFTMDHSDISHHLTEVPSRLWASPPPA 751
Query: 317 GVGGGDPRGF-DASSGFTPRN--RPVESGNHAAILTSTTIEVVIPQLYMAHVYGENNSNL 373
PRG DAS G + + SG+ +AI+T+TT+E+ +P+ M+ VYGE NL
Sbjct: 752 A-----PRGLSDASGGLSSARAGHALGSGHKSAIVTNTTVEIRVPENAMSFVYGEQGYNL 806
Query: 374 SHIRQISGANVVVNDPKPGATEGVVMVSGTSDQMRAAQSLIHAFILCGVTS 424
+RQISGA V+V++P G ++ ++++SGT DQ +AAQ+L+HAFIL G TS
Sbjct: 807 EQLRQISGARVIVHEPPLGTSDRIIVISGTPDQTQAAQNLLHAFILTGETS 857
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 69/249 (27%), Positives = 112/249 (44%), Gaps = 45/249 (18%)
Query: 52 FKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMR--- 108
F+LLC L VG++IGK G++++ Q TGA I++ + S +R++ I A+ +S+ R
Sbjct: 47 FRLLCPLSHVGAVIGKSGNVIKQLQQSTGAKIRVEEPPFGSPDRVITIIAQADSKSRVKL 106
Query: 109 ------------------HSPAQDAVMRVHSRIAEIGFEPGQAVVARLLVHSQQIGCLLG 150
S AQ A+++V +A VV RLL S G ++G
Sbjct: 107 GVNNNGNAEGEKKEEEVEVSKAQGALIKVFELLA--AEADSDTVVCRLLTESSHAGAVIG 164
Query: 151 RGGHIVSEMRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRL---- 206
+GG +V +R+ TG I + ++ P C DE+V++ GN +V+ AL I+ L
Sbjct: 165 KGGQMVGSIRKETGCKISIRTEN-LPICADTDDEMVEIEGNAIAVKKALVSISRCLQNCQ 223
Query: 207 --------------RETIFPMKRPGPNNGHSYLPPFPEMPPPPFRPRHN---PASPGSYP 249
+E + RP LP E+ P +R R + P + P
Sbjct: 224 SIDKVRMVGNRPLEKEFQASLHRPIETIIQESLPRSIEVNPYDYRLRKDEIFPRGTLARP 283
Query: 250 SPVGPFHSM 258
S V P ++
Sbjct: 284 SDVNPHDTL 292
>gi|28261403|gb|AAO37828.1| HEN4 [Arabidopsis thaliana]
Length = 869
Score = 242 bits (617), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 153/410 (37%), Positives = 230/410 (56%), Gaps = 43/410 (10%)
Query: 48 EEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEM 107
++VVFK+LC + G +IG GG +VR +ETGA I + + L D EER++ ++A EN E
Sbjct: 462 QDVVFKILCSTENAGGVIGTGGKVVRMLHSETGAFINVGNALDDCEERLIAVTASENPEC 521
Query: 108 RHSPAQDAVMRVHSRIAEIGFE------PGQAVVARLLVHSQQIGCLLGRGGHIVSEMRR 161
+ SPAQ A+M + SR+ E+ P ++ ARL+V + QIGC+LG+GG IVSEMR+
Sbjct: 522 QSSPAQKAIMLIFSRLFELATNKILDNGPRSSITARLVVPTSQIGCVLGKGGVIVSEMRK 581
Query: 162 ATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIF--PMKRPGPN 219
TGA+I++ +Q P+C S +D++VQ+ + +V++A+FHITSRLR+++F MK
Sbjct: 582 TTGAAIQILKVEQNPKCISENDQVVQITEEFPNVREAIFHITSRLRDSVFSNSMK----- 636
Query: 220 NGHSYLPPFPEMPPPPFRPRH--NPASPGSYPS---PVGPFHSMDRGMGPSQPFDHQAAF 274
+S + F R NP S GS+ S P S+ R S ++
Sbjct: 637 --NSLAKSSSALTTERFYDRQSDNPLSIGSHQSVSNPATNSSSLHRRSEDSFLSGSHSSV 694
Query: 275 SH----GMDPMVPPNSDRIPFPYG-------SERPGHGPTFDRPPSPRSWT--PQGVGG- 320
++ G DP + P PFP S G T D + T P +
Sbjct: 695 NYSRSVGTDPYIRPED---PFPDRFNPSAGYSHNFGRRFTMDHSDNSHHLTEAPSRLWAS 751
Query: 321 ---GDPRGFDASSGFTPRNRP---VESGNHAAILTSTTIEVVIPQLYMAHVYGENNSNLS 374
PRG +SG R + SG+ +AI+T+TT+E+ +P M+ VYGE NL
Sbjct: 752 PPPAAPRGLSDASGGLSSARAGHVLGSGHKSAIVTNTTVEIRVPANAMSFVYGEQGYNLE 811
Query: 375 HIRQISGANVVVNDPKPGATEGVVMVSGTSDQMRAAQSLIHAFILCGVTS 424
+RQISGA V++++P G ++ ++++SGT DQ +AAQ+L+HAFIL G TS
Sbjct: 812 QLRQISGARVIIHEPPLGTSDRIIVISGTPDQTQAAQNLLHAFILTGETS 861
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 91/177 (51%), Gaps = 24/177 (13%)
Query: 52 FKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMR--- 108
F+LLC L VG++IGK G++++ Q TGA I++ + S +R++ I A+ +S+ R
Sbjct: 49 FRLLCPLSHVGAVIGKSGNVIKQLQQSTGAKIRVEEPPSGSPDRVITIIAQADSKSRVKL 108
Query: 109 ------------------HSPAQDAVMRVHSRIAEIGFEPGQAVVARLLVHSQQIGCLLG 150
S AQ A+++V +A VV RLL S G ++G
Sbjct: 109 GANNNGNAEGEKKEEEVEVSKAQGALIKVFELLA--AEADSDTVVCRLLTESSHAGAVIG 166
Query: 151 RGGHIVSEMRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLR 207
+GG +V +R+ TG I + ++ P C DE+V+V GN +V+ AL I+ L+
Sbjct: 167 KGGQMVGSIRKETGCKISIRIEN-LPICADTDDEMVEVEGNAIAVKKALVSISRCLQ 222
>gi|334188619|ref|NP_001190612.1| HEN4 isoform 2 [Arabidopsis thaliana]
gi|332010502|gb|AED97885.1| HEN4 isoform 2 [Arabidopsis thaliana]
Length = 866
Score = 242 bits (617), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 154/416 (37%), Positives = 230/416 (55%), Gaps = 46/416 (11%)
Query: 48 EEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEM 107
++VVFK+LC + G +IG GG +VR +ETGA I + + L D EER++ ++A EN E
Sbjct: 450 QDVVFKILCSTENAGGVIGTGGKVVRMLHSETGAFINVGNTLDDCEERLIAVTASENPEC 509
Query: 108 RHSPAQDAVMRVHSRIAEIGFE------PGQAVVARLLVHSQQIGCLLGRGGHIVSEMRR 161
+ SPAQ A+M + SR+ E+ P ++ ARL+V + QIGC+LG+GG IVSEMR+
Sbjct: 510 QSSPAQKAIMLIFSRLFELATNKILDNGPRSSITARLVVPTSQIGCVLGKGGVIVSEMRK 569
Query: 162 ATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIF--PMKRPGPN 219
TGA+I++ +Q P+C S +D++VQ+ G + +V++A+FHITSRLR+++F MK
Sbjct: 570 TTGAAIQILKVEQNPKCISENDQVVQITGEFPNVREAIFHITSRLRDSVFSNSMK----- 624
Query: 220 NGHSYLPPFPEMPPPPFRPRH--NPASPGSYPS---PVGPFHSMDRGMGPSQPFDHQAAF 274
+S + F R NP S GS+ S P S+ R S ++
Sbjct: 625 --NSLAKSSSALTTERFYDRQSDNPLSIGSHQSVSNPATNSSSLHRRSEDSFLSGSHSSV 682
Query: 275 SH----GMDPMVPPNS---DRI-PFPYGSERPGHGPTFDRPPSPRSWT--PQGVGG---- 320
++ G DP + P DR P S G T D + T P +
Sbjct: 683 NYSRSVGTDPYIRPEDPFPDRFNPSAGYSHNFGRRFTMDHSDNSHHLTEAPSRLWASPPP 742
Query: 321 GDPRGFDASSGFTPRNRP------------VESGNHAAILTSTTIEVVIPQLYMAHVYGE 368
PRG +SG R SG+ +AI+T+TT+E+ +P M+ VYGE
Sbjct: 743 AAPRGLSDASGGLSSARAGHVLGSLHARLVFSSGHKSAIVTNTTVEIRVPANAMSFVYGE 802
Query: 369 NNSNLSHIRQISGANVVVNDPKPGATEGVVMVSGTSDQMRAAQSLIHAFILCGVTS 424
NL +RQISGA V++++P G ++ ++++SGT DQ +AAQ+L+HAFIL G TS
Sbjct: 803 QGYNLEQLRQISGARVIIHEPPLGTSDRIIVISGTPDQTQAAQNLLHAFILTGETS 858
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 91/177 (51%), Gaps = 24/177 (13%)
Query: 52 FKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMR--- 108
F+LLC L VG++IGK G++++ Q TGA I++ + S +R++ I A+ +S+ R
Sbjct: 49 FRLLCPLSHVGAVIGKSGNVIKQLQQSTGAKIRVEEPPSGSPDRVITIIAQADSKSRVKL 108
Query: 109 ------------------HSPAQDAVMRVHSRIAEIGFEPGQAVVARLLVHSQQIGCLLG 150
S AQ A+++V +A VV RLL S G ++G
Sbjct: 109 GANNNGNAEGEKKEEEVEVSKAQGALIKVFELLA--AEADSDTVVCRLLTESSHAGAVIG 166
Query: 151 RGGHIVSEMRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLR 207
+GG +V +R+ TG I + ++ P C DE+V+V GN +V+ AL I+ L+
Sbjct: 167 KGGQMVGSIRKETGCKISIRIEN-LPICADTDDEMVEVEGNAIAVKKALVSISRCLQ 222
>gi|357466759|ref|XP_003603664.1| Poly(rC)-binding protein [Medicago truncatula]
gi|355492712|gb|AES73915.1| Poly(rC)-binding protein [Medicago truncatula]
Length = 662
Score = 239 bits (610), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 150/377 (39%), Positives = 213/377 (56%), Gaps = 35/377 (9%)
Query: 48 EEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEM 107
E + F+LLC + VG+LIGKGGSI++ Q ET + IK+ + +P SE+ I++IS + +
Sbjct: 310 EILTFRLLCPSESVGNLIGKGGSIIKMLQQETASEIKVIEAIPGSEDCIIIISGPAHPDD 369
Query: 108 RHSPAQDAVMRVHSRIAEIGFEPGQ-AVVARLLVHSQQIGCLLGRGGHIVSEMRRATGAS 166
R SP Q+A+ RV +RI+ + + +++AR++V S+ IGCLLG+GG I++EMR +GA
Sbjct: 370 RISPVQEAIFRVQNRISRAMLDSKEHSMLARVIVSSKHIGCLLGKGGSIIAEMRNLSGAH 429
Query: 167 IRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKRPGPN--NGHSY 224
IR+ KD+ P+C S DE++QV G +V DAL IT+RLR F P N + ++
Sbjct: 430 IRMLGKDKGPKCVSEDDEVIQVSGVIEAVHDALLQITTRLRNNFFRDAFPSANFPSNSAF 489
Query: 225 LPPFPEMPPPPFRPRHNPASPGSYPSPVGPFHSMDRGMGPSQPFDHQAAFSHGMDPMVPP 284
L P PP+ R + PG Y S +GP H P F P
Sbjct: 490 LDQHS--PFPPYLGRRGLSPPGMY-SDLGPRH-------PHADF---------------P 524
Query: 285 NSDRIPFPYGSERPGHGPTF-DRPPSPRSWTPQGV-GGGDPRGFDASSGFTPRNRPVESG 342
D PF R G P +R P W P+G+ GG G +G PR +G
Sbjct: 525 LDDHPPFMNNMYRSGIPPLISERKP----WGPKGILEGGGHMGLPEFAG-GPRRISGFAG 579
Query: 343 NHAAILTSTTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATEGVVMVSG 402
I+TSTT+EVV+P+ +A +YGEN L I QIS ANV++ DP PGA E +++SG
Sbjct: 580 GSQPIITSTTVEVVVPRALVAEIYGENGECLKQILQISDANVIITDPIPGAVETKIIISG 639
Query: 403 TSDQMRAAQSLIHAFIL 419
T +Q AAQSLI AF++
Sbjct: 640 TPEQTNAAQSLIQAFVM 656
Score = 84.3 bits (207), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 89/286 (31%), Positives = 127/286 (44%), Gaps = 65/286 (22%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVI-------SAR 102
VVF+LLC K+G +IGKGGSI+ ++ETG +KI + +P EER++ SA
Sbjct: 32 VVFRLLCPASKIGGVIGKGGSIISQIRHETGVKVKIEEPVPGCEERVITFLKESEEGSAE 91
Query: 103 ENSEMR-----HSPAQD----------------------------------AVMRVHSRI 123
+ E+ S +D AVM V R+
Sbjct: 92 QGKEVNDNDESESKVKDDEEKGNGDDNEDKDSVSVEDSQSEKVNSNPTIMRAVMLVFERV 151
Query: 124 AEI--GFEPGQAVVA-RLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAPRCGS 180
AE G E + RLL+ S Q+GC+LG+GG ++ M +GA IR+ PK++ P C S
Sbjct: 152 AEDEGGDESKKGYFGLRLLILSNQVGCILGKGGSVIKRMSAESGAQIRILPKEEIPACAS 211
Query: 181 PHDEIVQVIGNYHSVQDALFHITSRLRET------IFPMKRPGPNNGHSYLPPFPEMPPP 234
DE+VQ+ G V+ AL + +L E P GP++ HSY + PP
Sbjct: 212 DSDELVQITGGVEVVRRALQSVFQQLVENSPRDHESLPTNLTGPSS-HSY----GQFPPN 266
Query: 235 PFRPRHNPASPGSYPSPVGPFHSMDRGMGPSQPFDHQAAFSHGMDP 280
AS + P+ + FHS P P H+ A M P
Sbjct: 267 KRTFAGQGASFATGPNEIPVFHS-----APMIPKFHEGAILGRMRP 307
Score = 39.3 bits (90), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 48/91 (52%), Gaps = 11/91 (12%)
Query: 130 PGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAPRCGSPHDEIVQVI 189
P + + RLL S+ +G L+G+GG I+ +++ T + I+V + P GS D I+ +
Sbjct: 308 PPEILTFRLLCPSESVGNLIGKGGSIIKMLQQETASEIKVI--EAIP--GS-EDCIIIIS 362
Query: 190 GNYH------SVQDALFHITSRLRETIFPMK 214
G H VQ+A+F + +R+ + K
Sbjct: 363 GPAHPDDRISPVQEAIFRVQNRISRAMLDSK 393
>gi|356518382|ref|XP_003527858.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine
max]
Length = 676
Score = 234 bits (597), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 171/425 (40%), Positives = 236/425 (55%), Gaps = 42/425 (9%)
Query: 8 YPPAAEPFHQRG--YAPGYH--SRGYSSGPG----HET-VGGRNRMFYEEEVVFKLLCHL 58
+PP F +G +A G H S +S+ P HE + GR R +E + F+LLC
Sbjct: 275 FPPHNRSFSAQGEPFASGPHDISAFHSAAPLIPKFHEAAIHGRMRPL-QEMLTFRLLCPA 333
Query: 59 DKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMRHSPAQDAVMR 118
++VG++IGKGG+I++T Q ET + IK+ + PDSE+ ++VIS + E R SP Q+AV R
Sbjct: 334 ERVGNIIGKGGAIIKTVQQETASEIKVLEAPPDSEDCVIVISGPAHPEDRISPVQEAVFR 393
Query: 119 VHSRIAE-IGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAPR 177
V +RIA+ I ++AR LV S QIGCLLG+GG I++EMR+ +GA IR+ KD+ P+
Sbjct: 394 VQTRIAKPIPDAKDHIMLARFLVSSTQIGCLLGKGGSIITEMRKKSGAHIRILGKDKVPK 453
Query: 178 CGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKRPGPNNGHSYLPPFPEMPP-PPF 236
C S +E++QV G +V DAL IT+RL+ F P N S P ++PP PP+
Sbjct: 454 CASEDEEVIQVNGEIEAVHDALLQITTRLKHHCFRDSYPSVNY-PSNSPFLDQLPPFPPY 512
Query: 237 RPRHNPASPGSYPSPVGPFHSMDRGMGPSQPFDHQAAFSHGMDPMVPPNSDRIPFPYGSE 296
R + P Y S +G P H A F P DR PF
Sbjct: 513 LGRRGLSPPRMY-SDLG------------HPHPH-AGF---------PLDDRPPFLNSIH 549
Query: 297 RPGHGPTF-DRPPSPRSWTPQGV-GGGDPRGFDASSGFTPRNRPVESGNHAAILTSTTIE 354
RPG P +R P W PQG+ GG P G G PR +G I+TSTT+E
Sbjct: 550 RPGLPPHISERKP----WGPQGILEGGIPIGLPDFPGGPPRRISGFAGGSQPIITSTTVE 605
Query: 355 VVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATEGVVMVSGTSDQMRAAQSLI 414
VV+P+ + +YGE+ L I QIS AN+ + DPKPG E +++SGT +Q AAQSLI
Sbjct: 606 VVVPRAVVPVIYGEDGECLKQILQISDANITITDPKPGTVETKIIISGTPEQTHAAQSLI 665
Query: 415 HAFIL 419
AF++
Sbjct: 666 QAFVM 670
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 92/318 (28%), Positives = 138/318 (43%), Gaps = 80/318 (25%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISAREN----- 104
VVF+LLCH ++G +IGKGGSI+ + ETG ++I + +P +ER++ IS E
Sbjct: 34 VVFRLLCHASRIGGVIGKGGSIISQIRQETGVKLRIEEAVPGCDERVITISGSEKETEED 93
Query: 105 ---------------------------------------------SEMRHSPAQDAVMRV 119
SE +S A+ V
Sbjct: 94 NTEQGKEVNDNDDGGSEGKDREEKDDGDGNEDKREKDAVPVEDSKSEKGNSAIWKAISLV 153
Query: 120 HSRIAEIGFEPGQ---------AVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVF 170
R+ E E + + RLL+ + Q+GC+LG+GG ++ M +GA IR+
Sbjct: 154 FERMVEGVEETTEGDEESNKPSSFFLRLLILTAQVGCVLGKGGSVIKRMAAESGAQIRIL 213
Query: 171 PKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRET------IFPMKRPGPNNGHSY 224
PKD+ P C S DEIVQ+ G+ V+ AL ++ +L E K GP++ HS
Sbjct: 214 PKDKLPACASASDEIVQISGSVEVVRKALQSVSQQLLENPPRDHDSLSAKSTGPSS-HS- 271
Query: 225 LPPFPEMPP--PPFRPRHNPASPGSYPSPVGPFHSMDRGMGPSQPFDHQAAFSHGMDPMV 282
F + PP F + P + G P + FHS P P H+AA M P+
Sbjct: 272 ---FGQFPPHNRSFSAQGEPFASG--PHDISAFHS----AAPLIPKFHEAAIHGRMRPLQ 322
Query: 283 PPNSDRIPFPYGSERPGH 300
+ R+ P +ER G+
Sbjct: 323 EMLTFRLLCP--AERVGN 338
Score = 46.6 bits (109), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 46/74 (62%), Gaps = 6/74 (8%)
Query: 124 AEIGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAPRCGSPHD 183
+ +G PG +VV RLL H+ +IG ++G+GG I+S++R+ TG +R+ ++ P C +
Sbjct: 25 SSLGVSPG-SVVFRLLCHASRIGGVIGKGGSIISQIRQETGVKLRI--EEAVPGC---DE 78
Query: 184 EIVQVIGNYHSVQD 197
++ + G+ ++
Sbjct: 79 RVITISGSEKETEE 92
>gi|255537898|ref|XP_002510014.1| Poly(rC)-binding protein, putative [Ricinus communis]
gi|223550715|gb|EEF52201.1| Poly(rC)-binding protein, putative [Ricinus communis]
Length = 679
Score = 233 bits (594), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 179/420 (42%), Positives = 241/420 (57%), Gaps = 38/420 (9%)
Query: 8 YPPAAEPFHQRGYAPGYHSRGYSSGPGHETVGGRNRMFYEEEVVFKLLCHLDKVGSLIGK 67
YPP F+ RG G R + G + GR R + + F+LLC +KVG +IGK
Sbjct: 284 YPPPYHSFNARGTTYGAGPREFHEG----GMPGRMRP-APDMLTFRLLCLDEKVGGVIGK 338
Query: 68 GGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMRHSPAQDAVMRVHSRIAEIG 127
GG+I++T Q ETG IK+ + + DSE+RI++IS + + R S AQDAV+RV +RIA
Sbjct: 339 GGAIIKTLQQETGCEIKVLEGVSDSEDRIILISGPAHPDDRISAAQDAVLRVQTRIARAL 398
Query: 128 FEPG---QAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAPRCGSPHDE 184
P +AV+ RLLV S QIGCLLG+GG I++EMR++TGA IR+ KDQ P+C S ++E
Sbjct: 399 PLPEGKEKAVIGRLLVSSNQIGCLLGKGGAIMAEMRKSTGAYIRILGKDQIPKCASENEE 458
Query: 185 IVQVIGNYHSVQDALFHITSRLRETIFPMKRPGPNNGHSYLPPFPEMPP--PPFRPRHNP 242
+VQ+ G + VQ+AL IT+RLR F + P+ H P F + P PP+ R
Sbjct: 459 VVQINGEHEVVQEALLQITTRLRNHFF--RDVFPSIDHPSNPAFLDQAPPFPPYMGRRE- 515
Query: 243 ASPGSYPSPVGPFHSMDRGMGPSQPFDHQAAFSHGMDPMVPPNSDRIPFPYGSERPGHGP 302
SP P FHS D GP P P+ D PF + RPG P
Sbjct: 516 LSP-----PFHAFHSFDGMGGPPPPVGFH------------PHDDHSPFMHNIHRPGMPP 558
Query: 303 TFDRPPSPRSWTPQGV-GGGDPRGFDASSGFTPRNRPVESG--NHAAILTSTTIEVVIPQ 359
F+R P W PQG+ G P G G P+ R G NH AI+TSTT+EVV+P+
Sbjct: 559 HFERKP----WGPQGLMEAGGPMGLPEFGGH-PQRRISGFGGVNHPAIITSTTVEVVVPR 613
Query: 360 LYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATEGVVMVSGTSDQMRAAQSLIHAFIL 419
+ +YGE+ + L IRQIS A + V +PKPGA E V+++SGT +Q AAQSLI AF++
Sbjct: 614 SVVPVIYGEDGACLKQIRQISDAKITVTEPKPGAAETVIIISGTPEQTHAAQSLIQAFVM 673
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 77/254 (30%), Positives = 119/254 (46%), Gaps = 68/254 (26%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISA-------- 101
VVF++LC K G +IGKGG+I+ + ETGA +++ + +P S+ER+V+I+A
Sbjct: 36 VVFRILCPASKTGGIIGKGGAIISQIRQETGAKVRVEETVPGSDERVVIIAAGSDKEMEV 95
Query: 102 ----------------------------------RENSEMRHSPA--------QDAVMRV 119
+E + HS Q A++ V
Sbjct: 96 NNAEQNRGDSDDKEPNVGEESNGKQAGSDEDDENKETVSVEHSTKSVRETSSLQKALVLV 155
Query: 120 HSRIAEIGFEPGQA---------VVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVF 170
R+ E E + RLLV S Q+GCLLG+GG ++ +M +GA IR+
Sbjct: 156 FERMLEAEPEMDEGNEEKKKPSMSTLRLLVLSSQVGCLLGKGGSVIKQMSAESGAQIRIL 215
Query: 171 PKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRET------IFPMKRPGPNNGHSY 224
P+D+ P C SP DE+VQ+ G +++ AL + +L E +P GP++ HS+
Sbjct: 216 PRDKLPICASPTDELVQIAGEVDAIRKALQSVAQQLLENPPKDPEAYPPISTGPSS-HSF 274
Query: 225 LPPF--PEMPPPPF 236
P PE PPP+
Sbjct: 275 GHPLPRPEAYPPPY 288
>gi|356507955|ref|XP_003522728.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine
max]
Length = 678
Score = 232 bits (592), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 168/424 (39%), Positives = 234/424 (55%), Gaps = 40/424 (9%)
Query: 8 YPPAAEPFHQRG--YAPGYHS-RGYSSGP-----GHET-VGGRNRMFYEEEVVFKLLCHL 58
+PP F +G +A G H + S P HE + GR R +E + F+LLC +
Sbjct: 277 FPPHNHSFAAQGEPFATGPHDISAFHSAPPLIPKFHEAAIHGRTRPL-QEMLTFRLLCPV 335
Query: 59 DKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMRHSPAQDAVMR 118
++VG++IGKGG+I++T Q ET + IK+ + PDSE+ ++VIS + E R SP Q+AV R
Sbjct: 336 ERVGNIIGKGGAIIKTVQQETVSEIKVLEAPPDSEDCVIVISGPAHPEDRVSPVQEAVFR 395
Query: 119 VHSRIAE-IGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAPR 177
V +RIA+ I ++AR LV S QIGCLLG+GG I++EMR+ +GA IR+ KD+ P+
Sbjct: 396 VQTRIAKPIPDANDHTMLARFLVSSNQIGCLLGKGGSIITEMRKKSGAHIRILGKDKVPK 455
Query: 178 CGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKRPGPNNGHSYLPPFPEMPP-PPF 236
C S +E++QV G +V +AL IT+RL+ F P N S P ++PP PP+
Sbjct: 456 CASEDEEVIQVNGEIEAVHEALLQITTRLKHHFFRDSYPSVNY-PSNSPFLDQLPPFPPY 514
Query: 237 RPRHNPASPGSYPSPVGPFHSMDRGMGPSQPFDHQAAFSHGMDPMVPPNSDRIPFPYGSE 296
R + PG Y S +GP P H A F P DR F
Sbjct: 515 LGRRGLSPPGMY-SDLGP------------PPSH-AGF---------PLDDRPAFLNNIH 551
Query: 297 RPGHGPTFDRPPSPRSWTPQGV-GGGDPRGFDASSGFTPRNRPVESGNHAAILTSTTIEV 355
RPG P + + W P GV GG P G PR +G I+TSTT+EV
Sbjct: 552 RPGLPPHISQR---KPWGPLGVLEGGTPIGLPDFPRGPPRRISGFAGGSQPIITSTTVEV 608
Query: 356 VIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATEGVVMVSGTSDQMRAAQSLIH 415
V+P+ + +YGE+ L I QIS AN+ + DPKPGA E +++SGT +Q AAQSLI
Sbjct: 609 VVPRAVVPVIYGEDGECLKQILQISDANITITDPKPGAVETKIIISGTPEQTHAAQSLIQ 668
Query: 416 AFIL 419
AF++
Sbjct: 669 AFVM 672
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 89/298 (29%), Positives = 129/298 (43%), Gaps = 83/298 (27%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISAREN----- 104
VVF+LLCH ++GS+IGKGGSI+ + ETG +KI + +P +ER++ IS +
Sbjct: 34 VVFRLLCHASRIGSVIGKGGSIISQIRLETGVKVKIEEAVPGCDERVITISGSDKEAEEY 93
Query: 105 -----------------------------------------------SEMRHSPAQDAVM 117
SE +S A+
Sbjct: 94 TAEQGKEVNDNDDVGSEGKDGEEKNGSDGNGNEDKEEKDAVPVEDSKSEKGNSAIWKAIS 153
Query: 118 RVHSRIAEIGFE----------PGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASI 167
V R+ E G E + RLL+ + Q+GC+LG+GG ++ M +GA I
Sbjct: 154 LVFERMVE-GVEETTEGDEESNKSSSFFLRLLILTAQVGCVLGKGGSVIKRMAAESGAQI 212
Query: 168 RVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRET------IFPMKRPGPNNG 221
R+ PKD+ P C S DEIVQ+ G+ V+ AL ++ +L E K GP++
Sbjct: 213 RILPKDKVPVCASAFDEIVQISGSVEVVRKALQSVSQQLLENPPRDHESLSAKSTGPSS- 271
Query: 222 HSYLPPFPEMPP--PPFRPRHNPASPGSYPSPVGPFHSMDRGMGPSQPFDHQAAFSHG 277
HS F + PP F + P + G P + FHS P P H+AA HG
Sbjct: 272 HS----FGQFPPHNHSFAAQGEPFATG--PHDISAFHSAP----PLIPKFHEAAI-HG 318
Score = 43.1 bits (100), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 32/46 (69%), Gaps = 2/46 (4%)
Query: 133 AVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAPRC 178
+VV RLL H+ +IG ++G+GG I+S++R TG +++ ++ P C
Sbjct: 33 SVVFRLLCHASRIGSVIGKGGSIISQIRLETGVKVKI--EEAVPGC 76
>gi|357476219|ref|XP_003608395.1| Poly(rC)-binding protein [Medicago truncatula]
gi|355509450|gb|AES90592.1| Poly(rC)-binding protein [Medicago truncatula]
Length = 616
Score = 230 bits (586), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 150/393 (38%), Positives = 219/393 (55%), Gaps = 57/393 (14%)
Query: 46 YEEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENS 105
++EV F++LC D++G+++GKGGSIV+ QNETGA+I + + + E+R++ I+A EN
Sbjct: 262 LKQEVTFRILCSGDRIGAVLGKGGSIVKALQNETGANISVGPPVVECEDRLITITALENP 321
Query: 106 EMRHSPAQDAVMRVHSRIAEIGFE--------PGQAVVARLLVHSQQIGCLLGRGGHIVS 157
E R SPAQ+AV+ V R E E +V A+L+V S Q+G LLG+GG IVS
Sbjct: 322 ESRFSPAQEAVVLVFCRSIECCIEKVVDWRSNKESSVTAQLVVPSNQVGVLLGKGGAIVS 381
Query: 158 EMRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKRPG 217
EMR+AT SIR+ + P+C S +D++VQ+ G +V+DAL++ T RLR+ IF + +
Sbjct: 382 EMRKATWTSIRITRNGEVPKCASFNDQVVQISGELPNVRDALYNATRRLRDHIFLIAQNS 441
Query: 218 PNNGHSYLPPFPEMPPPPFRPRHNPASPGSYPSPVGPFHSMDRGMGPSQPFDHQAAFSHG 277
G P RPR S P +G + GPS + S
Sbjct: 442 GGTG------------PYRRPRD------SIPLGLGGQSVVGSNHGPSIH-----SLSQS 478
Query: 278 MDPMVPPNSDRIPFPYGSERPGHGPTFDRPPSPRSWTPQGVGGGDPR-GFDASSGFTPRN 336
MD + S G R S W P+ VGG + R DA PR
Sbjct: 479 MDHLTL-----------SRNSG------RSASSGVWAPKVVGGKNSRYTDDAGRRLNPRE 521
Query: 337 RPVE--SGN-----HAAILTSTTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDP 389
+E SG+ +AAI+T+TT+E+++P + VYGEN SNL +RQISGA VV ++P
Sbjct: 522 GDLELASGSNTVIGNAAIITNTTVEIMLPNDIIGSVYGENGSNLDQLRQISGAKVVFHEP 581
Query: 390 KPGATE-GVVMVSGTSDQMRAAQSLIHAFILCG 421
+PG ++ +++SGT D+ +AAQSL+ A+IL G
Sbjct: 582 RPGTSDRAKIVLSGTPDETQAAQSLLQAYILNG 614
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 65/168 (38%), Positives = 102/168 (60%), Gaps = 9/168 (5%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMRH 109
VVF+LLCH ++G+ IGK GS++++ Q TGA I+I D D ER++V+ N +
Sbjct: 20 VVFRLLCHASRIGAFIGKSGSVIKSLQQLTGARIRIDDAPVDCPERVIVVIVNLNGDGDV 79
Query: 110 SPA-QDAVMRVHSRIAEI------GFEPGQAVVA-RLLVHSQQIGCLLGRGGHIVSEMRR 161
S Q+A+++V RI ++ G G VV+ RLLV++ Q G ++G+GG +V+++R
Sbjct: 80 SLNPQEALLKVFERILDVAAAESDGNGVGDRVVSCRLLVNAGQAGGVIGKGGMVVAKIRA 139
Query: 162 ATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRET 209
TG IRV D+ P C P DEI+++ G SV+ AL + RL++
Sbjct: 140 DTGCRIRVL-NDKLPACTKPSDEIIEIQGIASSVKKALVAVAGRLQDC 186
>gi|147845094|emb|CAN78473.1| hypothetical protein VITISV_026793 [Vitis vinifera]
Length = 709
Score = 214 bits (545), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 158/385 (41%), Positives = 211/385 (54%), Gaps = 31/385 (8%)
Query: 4 QGNPYPPAAEPFHQRGYAPGYHSRGYSSGPGHETVGGRNRMFYEEEVVFKLLCHLDKVGS 63
QG PY P H S PG M ++ + F+LLCH ++VG
Sbjct: 297 QGAPYAAGVRDTDYHSNTPQLHKFHESGMPGX--------MKPQDILTFRLLCHDERVGG 348
Query: 64 LIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMRHSPAQDAVMRVHSRI 123
+IGKGG+I++ QNETG IK+ D +PDSE+R++ IS + + R SPAQDAV+RV SRI
Sbjct: 349 IIGKGGTIIKNLQNETGCEIKVLDGVPDSEDRVIFISGSAHPDDRISPAQDAVLRVQSRI 408
Query: 124 AE-IGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAPRCGSPH 182
I + V+ARLLV S QIGCLLG+GG I++EMR+ +GA IR+ KDQ P+C S +
Sbjct: 409 VRAIPDSKEKTVIARLLVSSTQIGCLLGKGGAIIAEMRKLSGAHIRILGKDQIPKCASEN 468
Query: 183 DEIVQVIGNYHSVQDALFHITSRLRETIFPMKRPGPNNGHSYLPPFPEMPP--PPFRPRH 240
+E+VQ+ G + +VQ+AL IT+RLR F R + H P F + P PP+ R
Sbjct: 469 EEVVQINGEFEAVQEALLQITTRLRHHHF---RDAFSVNHPSNPAFTDQVPPFPPYLARR 525
Query: 241 NPASPGSYPSPVGP-FHSMDRGMGPSQPFDHQAAFSHGMDPMVPPNSDRIPFPYGSERPG 299
+ PG Y S +GP FH D +G P HG P+ DR PF + R G
Sbjct: 526 EFSPPGMY-SNLGPSFHKFD-AVGVLHP--------HG---GFHPHDDRAPFMHSIHRLG 572
Query: 300 HGPTF-DRPPSPRSWTPQG-VGGGDPRGFDASSGFTPRNRP-VESGNHAAILTSTTIEVV 356
P +R PS W QG + GG P G +G R P GN AI+TSTT+EVV
Sbjct: 573 IPPHIPERKPSSAPWGHQGLIEGGVPIGLADFAGGPQRRIPGFGGGNQQAIITSTTVEVV 632
Query: 357 IPQLYMAHVYGENNSNLSHIRQISG 381
+P+ + +YGE+ L IRQ G
Sbjct: 633 VPRSLVPSIYGEDGGCLRQIRQEVG 657
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 76/246 (30%), Positives = 114/246 (46%), Gaps = 60/246 (24%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISAR------- 102
VVF++LC K GS+IGKGG+I+ + ETG +++ + + +ER+V+I+
Sbjct: 45 VVFRVLCPASKTGSVIGKGGTIISQIRQETGVKVRVEETVSGCDERVVLITGSDKDTEAD 104
Query: 103 ------------------------ENSEMRHS-------------PAQDAVMRVHSRIAE 125
EN E + S Q A++ V R+AE
Sbjct: 105 NEQSKEDGEDTKAAEEVSDTKEPGENDEDKESVPVEDSQVEKGISSVQKALLLVFERMAE 164
Query: 126 IGFEPGQ---------AVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAP 176
E V RLLV S Q+GCLLG+GG ++ +M +GA IR+ P+D+ P
Sbjct: 165 GESETNGGDEDSNKSPTFVVRLLVLSSQVGCLLGKGGSVIKQMSAESGAQIRILPRDKLP 224
Query: 177 RCGSPHDEIVQVIGNYHSVQDALFHITSRL-----RETIFPMKRPGPNNGHSYLPPFP-- 229
C SP DE+VQ+ G + + AL I+ +L R+ P ++ H + PP P
Sbjct: 225 LCASPSDELVQITGELDACKQALQSISQQLLENPPRDYDIVSTNPTGSSSHLFGPPLPRS 284
Query: 230 EMPPPP 235
E PPP
Sbjct: 285 EAQPPP 290
Score = 39.7 bits (91), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Query: 36 ETVGGRNRMFYEEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIA--DILP 90
ET GG V +LL +VG L+GKGGS+++ E+GA I+I D LP
Sbjct: 168 ETNGGDEDSNKSPTFVVRLLVLSSQVGCLLGKGGSVIKQMSAESGAQIRILPRDKLP 224
>gi|302803919|ref|XP_002983712.1| hypothetical protein SELMODRAFT_445677 [Selaginella moellendorffii]
gi|300148549|gb|EFJ15208.1| hypothetical protein SELMODRAFT_445677 [Selaginella moellendorffii]
Length = 668
Score = 203 bits (516), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 130/402 (32%), Positives = 201/402 (50%), Gaps = 75/402 (18%)
Query: 31 SGPGHETVG-GRNRMFYEEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADIL 89
+ PG G GR+ + +EE+VF++LC +K+G++IGK ++T Q ETGA I + D +
Sbjct: 327 TAPGLSEFGTGRHLVPMDEELVFRILCPSEKIGNIIGK---FIQTLQEETGAKINVPDAV 383
Query: 90 PDSEERIVVISARENSEMRHSPAQDAVMRVHSRIAEIGFEPGQAVVARLLVHSQQIGCLL 149
P EER++++SA E+ + SPAQ+AV + ++ + G E + VV RLLV S +GCLL
Sbjct: 384 PGCEERVIIVSAVESPDDDLSPAQEAVFHIQDKLRDDGGETSERVVTRLLVPSNHVGCLL 443
Query: 150 GRGGHIVSEMRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRET 209
G+GG+I+SEMR +T A IRV ++Q P C +DE+VQV+G +DAL ITSRLR
Sbjct: 444 GKGGNIISEMRNSTRAIIRVLDREQLPLCALDNDEVVQVLGEIRVARDALVQITSRLRAN 503
Query: 210 IFPMKRPGPNNGHSYLPPFPEMPPPPFRPRHNPASPGSYPSPVGPFHSMDRGMGPSQPFD 269
+ +R + + + Y P + G+ SQP
Sbjct: 504 L-------------------------YREKTDRSDDYGYQRSTSPLSNF--GLQASQP-- 534
Query: 270 HQAAFSHGMDPMVPPNSDRIPFPYGSERPGHGPTFDRPPSPRSW----TPQGVGGGDPR- 324
P P SP SW T +G G PR
Sbjct: 535 --------------------------------PGIQAPRSPPSWLLQQTERGAYNGLPRL 562
Query: 325 ----GFDASSGFTPRNRPVESG-NHAAILTSTTIEVVIPQLYMAHVYGENNSNLSHIRQI 379
G + S G + +G + +++TST I+V+IP++ + V G+N NL+ I ++
Sbjct: 563 TSYAGIERSYGLAGDRSALPTGLTNLSVVTSTKIDVLIPEVTFSAVLGQNGDNLTQISKM 622
Query: 380 SGANVVVNDPKPGATEGVVMVSGTSDQMRAAQSLIHAFILCG 421
SGA V + D + ++ +SGT DQ A++++ AF G
Sbjct: 623 SGAKVTLADGCTATGDRLIEISGTPDQTNIAKTVVEAFAASG 664
Score = 139 bits (349), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 86/246 (34%), Positives = 128/246 (52%), Gaps = 55/246 (22%)
Query: 52 FKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISA---------- 101
F++LC ++GS+IGKGGSI++T + +TGA IKIAD +P S+ER+++I A
Sbjct: 62 FRILCPASRIGSVIGKGGSIIKTLRQQTGAKIKIADAIPGSDERVIIIGAFDAEGGGDED 121
Query: 102 --------------RENSEMRH--------SPAQDAVMRVHSRIAE-------------I 126
+++ M PAQ A+ +VHSRI + +
Sbjct: 122 YPAGSGGGSAAALDKDDRAMDEYTNGRDVACPAQLALFKVHSRILDADKYEDDLDDSDSV 181
Query: 127 GFEPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAPRCGSPHDEIV 186
+ + VV R+LV Q+GCLLG+ G I+ +MR TG+ IR+ P++Q P C P DE+V
Sbjct: 182 EEDLSEKVVTRMLVPENQVGCLLGKKGRIIEQMREETGSQIRILPREQLPVCALPTDEVV 241
Query: 187 QVIGNYHSVQDALFHITSRLRETIFPMKRP-------GPNNGHSYLPPFPEMPPPPFRPR 239
QV+G+ SV+ AL I++RL + P RP G G S FP P+ P+
Sbjct: 242 QVVGDRPSVKRALNAISTRLLDNP-PKDRPSSASFQSGNFGGGSRSSGFP--ASEPYIPQ 298
Query: 240 HNPASP 245
H +P
Sbjct: 299 HTSLAP 304
>gi|294464716|gb|ADE77865.1| unknown [Picea sitchensis]
Length = 348
Score = 202 bits (514), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 134/398 (33%), Positives = 206/398 (51%), Gaps = 70/398 (17%)
Query: 24 YHSRGYSSGPGHETVGGRNRMFYEEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASI 83
YH+R Y F EE+VF++LC K+GS+IG+ GSI+++ Q++ GA I
Sbjct: 8 YHARDYEPS------------FSGEELVFRILCPNKKIGSVIGRAGSIIKSLQDDIGAKI 55
Query: 84 KIADILPDSEERIVVISARENSEMRHSPAQDAVMRVHSRIAEIGFEPGQAVVARLLVHSQ 143
KI D +P S+ERI++ISA E E SPAQ+A++ + S+I ++G + + +LL+ S
Sbjct: 56 KITDAVPGSDERIIIISANEVLEDNLSPAQEALLHIQSQIVDLGPDKDGVITTKLLIPSN 115
Query: 144 QIGCLLGRGGHIVSEMRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHIT 203
Q GCLLG+GG I+SEMR+ T A+IR+ P++ P C DE+VQ++G+ + + AL +T
Sbjct: 116 QTGCLLGKGGAIISEMRKQTRANIRILPREDLPPCALDSDEMVQIVGDIRAARAALVQVT 175
Query: 204 SRLRETIF-PMKRPGPNNGHSYLPPFPEMPPPPFRPRHNPASPGSYPSPVGPFHSMDRGM 262
SRLR I + GP +L P R R P+SPG SP F + R +
Sbjct: 176 SRLRSFIHREIGISGP-----FLSSSSAPDPSSKR-RLEPSSPGRSYSPGLGFQAGSRSL 229
Query: 263 GPSQPFDHQAAFSHGMDPMVPPNSDRIPFPYGSERPGHGPTFDRPPSPRSWTPQGVGGGD 322
P +W + + G +
Sbjct: 230 -----------------------------------------------PDAWPSKEISGRN 242
Query: 323 PRGFDASSGFTPRNRPVESG-NHAAILTSTTIEVVIPQLYMAHVYGENNSNLSHIRQISG 381
+D + T + P SG + A ++T TT+EVVIP+ +A + + ++ I QISG
Sbjct: 243 LPEYDERA--TKQGGPKGSGISTAGLVTKTTVEVVIPEHAIAPLIANSGKGVAQIAQISG 300
Query: 382 ANVVVNDPKPGATEGVVMVSGTSDQMRAAQSLIHAFIL 419
A V + + +PG ++ V+ +SGT +Q AAQ L+ AFIL
Sbjct: 301 AKVNLLEVRPG-SDKVIEISGTPEQTHAAQGLLQAFIL 337
>gi|302814720|ref|XP_002989043.1| hypothetical protein SELMODRAFT_10869 [Selaginella moellendorffii]
gi|300143144|gb|EFJ09837.1| hypothetical protein SELMODRAFT_10869 [Selaginella moellendorffii]
Length = 630
Score = 201 bits (512), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 139/435 (31%), Positives = 216/435 (49%), Gaps = 64/435 (14%)
Query: 10 PAAEPF--HQRGYAPGYHSR----------GYS----SGPGHETVG-GRNRMFYEEEVVF 52
PA+EP+ AP R GY + PG G GR+ + +EE+VF
Sbjct: 230 PASEPYIPQHTSLAPQTRLRAEPRSDSGDNGYQLLRPTAPGLSEFGTGRHLVPMDEELVF 289
Query: 53 KLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMRHSPA 112
++LC +K+G++IGK ++T Q ETGA I + D +P EER++++SA E+ + SPA
Sbjct: 290 RILCPSEKIGNIIGK---FIQTLQEETGAKINVPDAVPGCEERVIIVSAVESPDDDLSPA 346
Query: 113 QDAVMRVHSRIAEIGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPK 172
Q+AV + ++ + G E + VV RLLV S +GCLLG+GG+I+SEMR +T A IRV +
Sbjct: 347 QEAVFHIQDKLRDDGGETSERVVTRLLVPSNHVGCLLGKGGNIISEMRNSTRAIIRVLDR 406
Query: 173 DQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKRPGPNNGHSYLPPFPEMP 232
+Q P C +DE+VQV+G +DAL ITSRLR +
Sbjct: 407 EQLPLCALDNDEVVQVLGEIRVARDALVQITSRLRANL---------------------- 444
Query: 233 PPPFRPRHNPASPGSYPSPVGPFHSMDRGMGPSQPFDHQAAFS----HGMDPMVPPNSDR 288
+R + + + Y P + G+ SQP QA S ++PP S
Sbjct: 445 ---YREKTDRSDDYGYQRSTSPLSNF--GLQASQPPGIQAPRSPPSWLLQQVLIPPPS-- 497
Query: 289 IPFPYGSERPGHGPTFDRPPSPRSW--TPQGVGGGDPRGFDASSGFTPRNRPVESG---- 342
+ S P DR S + W T + + + F + P +
Sbjct: 498 ----FKSRLTSFLPCLDRKRSLQ-WFATAYKLCWNREKLWLGRRSFGLADWPYQVSHSIQ 552
Query: 343 NHAAILTSTTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATEGVVMVSG 402
H +++TST I+V+IP++ + V G+N NL+ I ++SGA V + D + ++ +SG
Sbjct: 553 RHLSVVTSTKIDVLIPEVTFSAVLGQNGDNLTQISKMSGAKVTLADGCTATGDRLIEISG 612
Query: 403 TSDQMRAAQSLIHAF 417
T DQ A++++ AF
Sbjct: 613 TPDQTNIAKTVVEAF 627
Score = 139 bits (349), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 86/247 (34%), Positives = 129/247 (52%), Gaps = 55/247 (22%)
Query: 51 VFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISA--------- 101
+F++LC ++GS+IGKGGSI++T + +TGA IKIAD +P S+ER+++I A
Sbjct: 1 LFRILCPASRIGSVIGKGGSIIKTLRQQTGAKIKIADAIPGSDERVIIIGAFDAEGGGDE 60
Query: 102 ---------------RENSEMRH--------SPAQDAVMRVHSRIAE------------- 125
+++ M PAQ A+ +VHSRI +
Sbjct: 61 DYPAGSGGGAPAALDKDDRAMDEYTNGRDVACPAQLALFKVHSRILDADKYEDDLDDSDS 120
Query: 126 IGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAPRCGSPHDEI 185
+ + + VV R+LV Q+GCLLG+ G I+ +MR TG+ IR+ P++Q P C P DE+
Sbjct: 121 VEEDLSEKVVTRMLVPENQVGCLLGKKGRIIEQMREETGSQIRILPREQLPVCALPTDEV 180
Query: 186 VQVIGNYHSVQDALFHITSRLRETIFPMKRP-------GPNNGHSYLPPFPEMPPPPFRP 238
VQV+G+ SV+ AL I++RL + P RP G G S FP P+ P
Sbjct: 181 VQVVGDRPSVKRALNAISTRLLDNP-PKDRPSSASFQSGNFGGGSRSSGFP--ASEPYIP 237
Query: 239 RHNPASP 245
+H +P
Sbjct: 238 QHTSLAP 244
>gi|42573788|ref|NP_974990.1| HEN4 isoform 2 [Arabidopsis thaliana]
gi|332010500|gb|AED97883.1| HEN4 isoform 2 [Arabidopsis thaliana]
Length = 824
Score = 197 bits (502), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 131/363 (36%), Positives = 196/363 (53%), Gaps = 37/363 (10%)
Query: 48 EEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEM 107
++VVFK+LC + G +IG GG +VR +ETGA I + + L D EER++ ++A EN E
Sbjct: 450 QDVVFKILCSTENAGGVIGTGGKVVRMLHSETGAFINVGNTLDDCEERLIAVTASENPEC 509
Query: 108 RHSPAQDAVMRVHSRIAEIGFE------PGQAVVARLLVHSQQIGCLLGRGGHIVSEMRR 161
+ SPAQ A+M + SR+ E+ P ++ ARL+V + QIGC+LG+GG IVSEMR+
Sbjct: 510 QSSPAQKAIMLIFSRLFELATNKILDNGPRSSITARLVVPTSQIGCVLGKGGVIVSEMRK 569
Query: 162 ATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIF--PMKRPGPN 219
TGA+I++ +Q P+C S +D++VQ+ G + +V++A+FHITSRLR+++F MK
Sbjct: 570 TTGAAIQILKVEQNPKCISENDQVVQITGEFPNVREAIFHITSRLRDSVFSNSMK----- 624
Query: 220 NGHSYLPPFPEMPPPPFRPRH--NPASPGSYPS---PVGPFHSMDRGMGPSQPFDHQAAF 274
+S + F R NP S GS+ S P S+ R S ++
Sbjct: 625 --NSLAKSSSALTTERFYDRQSDNPLSIGSHQSVSNPATNSSSLHRRSEDSFLSGSHSSV 682
Query: 275 SH----GMDPMVPPNS---DRI-PFPYGSERPGHGPTFDRPPSPRSWT--PQGVGG---- 320
++ G DP + P DR P S G T D + T P +
Sbjct: 683 NYSRSVGTDPYIRPEDPFPDRFNPSAGYSHNFGRRFTMDHSDNSHHLTEAPSRLWASPPP 742
Query: 321 GDPRGFDASSGFTPRNRP---VESGNHAAILTSTTIEVVIPQLYMAHVYGENNSNLSHIR 377
PRG +SG R + SG+ +AI+T+TT+E+ +P M+ VYGE NL +R
Sbjct: 743 AAPRGLSDASGGLSSARAGHVLGSGHKSAIVTNTTVEIRVPANAMSFVYGEQGYNLEQLR 802
Query: 378 QIS 380
Q+S
Sbjct: 803 QVS 805
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 91/177 (51%), Gaps = 24/177 (13%)
Query: 52 FKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMR--- 108
F+LLC L VG++IGK G++++ Q TGA I++ + S +R++ I A+ +S+ R
Sbjct: 49 FRLLCPLSHVGAVIGKSGNVIKQLQQSTGAKIRVEEPPSGSPDRVITIIAQADSKSRVKL 108
Query: 109 ------------------HSPAQDAVMRVHSRIAEIGFEPGQAVVARLLVHSQQIGCLLG 150
S AQ A+++V +A VV RLL S G ++G
Sbjct: 109 GANNNGNAEGEKKEEEVEVSKAQGALIKVFELLA--AEADSDTVVCRLLTESSHAGAVIG 166
Query: 151 RGGHIVSEMRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLR 207
+GG +V +R+ TG I + ++ P C DE+V+V GN +V+ AL I+ L+
Sbjct: 167 KGGQMVGSIRKETGCKISIRIEN-LPICADTDDEMVEVEGNAIAVKKALVSISRCLQ 222
>gi|9759415|dbj|BAB09870.1| unnamed protein product [Arabidopsis thaliana]
Length = 833
Score = 194 bits (494), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 131/372 (35%), Positives = 195/372 (52%), Gaps = 46/372 (12%)
Query: 48 EEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEM 107
++VVFK+LC + G +IG GG +VR +ETGA I + + L D EER++ ++A EN E
Sbjct: 450 QDVVFKILCSTENAGGVIGTGGKVVRMLHSETGAFINVGNTLDDCEERLIAVTASENPEC 509
Query: 108 RHSPAQDAVMRVHSRIAEIGFE------PGQAVVARLLVHSQQIGCLLGRGGHIVSEMRR 161
+ SPAQ A+M + SR+ E+ P ++ ARL+V + QIGC+LG+GG IVSEMR+
Sbjct: 510 QSSPAQKAIMLIFSRLFELATNKILDNGPRSSITARLVVPTSQIGCVLGKGGVIVSEMRK 569
Query: 162 ATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIF--PMKRPGPN 219
TGA+I++ +Q P+C S +D++VQ+ G + +V++A+FHITSRLR+++F MK
Sbjct: 570 TTGAAIQILKVEQNPKCISENDQVVQITGEFPNVREAIFHITSRLRDSVFSNSMK----- 624
Query: 220 NGHSYLPPFPEMPPPPFRPRH--NPASPGSYPS---PVGPFHSMDRGMGPSQPFDHQAAF 274
+S + F R NP S GS+ S P S+ R S ++
Sbjct: 625 --NSLAKSSSALTTERFYDRQSDNPLSIGSHQSVSNPATNSSSLHRRSEDSFLSGSHSSV 682
Query: 275 SH----GMDPMVPPNS---DRI-PFPYGSERPGHGPTFDRPPSPRSWT--PQGVGG---- 320
++ G DP + P DR P S G T D + T P +
Sbjct: 683 NYSRSVGTDPYIRPEDPFPDRFNPSAGYSHNFGRRFTMDHSDNSHHLTEAPSRLWASPPP 742
Query: 321 GDPRGFDASSGFTPRNRP------------VESGNHAAILTSTTIEVVIPQLYMAHVYGE 368
PRG +SG R SG+ +AI+T+TT+E+ +P M+ VYGE
Sbjct: 743 AAPRGLSDASGGLSSARAGHVLGSLHARLVFSSGHKSAIVTNTTVEIRVPANAMSFVYGE 802
Query: 369 NNSNLSHIRQIS 380
NL +RQ+S
Sbjct: 803 QGYNLEQLRQVS 814
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 91/177 (51%), Gaps = 24/177 (13%)
Query: 52 FKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMR--- 108
F+LLC L VG++IGK G++++ Q TGA I++ + S +R++ I A+ +S+ R
Sbjct: 49 FRLLCPLSHVGAVIGKSGNVIKQLQQSTGAKIRVEEPPSGSPDRVITIIAQADSKSRVKL 108
Query: 109 ------------------HSPAQDAVMRVHSRIAEIGFEPGQAVVARLLVHSQQIGCLLG 150
S AQ A+++V +A VV RLL S G ++G
Sbjct: 109 GANNNGNAEGEKKEEEVEVSKAQGALIKVFELLA--AEADSDTVVCRLLTESSHAGAVIG 166
Query: 151 RGGHIVSEMRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLR 207
+GG +V +R+ TG I + ++ P C DE+V+V GN +V+ AL I+ L+
Sbjct: 167 KGGQMVGSIRKETGCKISIRIEN-LPICADTDDEMVEVEGNAIAVKKALVSISRCLQ 222
>gi|28261405|gb|AAO37829.1| HEN4 isoform 2 [Arabidopsis thaliana]
Length = 836
Score = 194 bits (493), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 130/366 (35%), Positives = 195/366 (53%), Gaps = 43/366 (11%)
Query: 48 EEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEM 107
++VVFK+LC + G +IG GG +VR +ETGA I + + L D EER++ ++A EN E
Sbjct: 462 QDVVFKILCSTENAGGVIGTGGKVVRMLHSETGAFINVGNALDDCEERLIAVTASENPEC 521
Query: 108 RHSPAQDAVMRVHSRIAEIGFE------PGQAVVARLLVHSQQIGCLLGRGGHIVSEMRR 161
+ SPAQ A+M + SR+ E+ P ++ ARL+V + QIGC+LG+GG IVSEMR+
Sbjct: 522 QSSPAQKAIMLIFSRLFELATNKILDNGPRSSITARLVVPTSQIGCVLGKGGVIVSEMRK 581
Query: 162 ATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIF--PMKRPGPN 219
TGA+I++ +Q P+C S +D++VQ+ + +V++A+FHITSRLR+++F MK
Sbjct: 582 TTGAAIQILKVEQNPKCISENDQVVQITEEFPNVREAIFHITSRLRDSVFSNSMK----- 636
Query: 220 NGHSYLPPFPEMPPPPFRPRH--NPASPGSYPS---PVGPFHSMDRGMGPSQPFDHQAAF 274
+S + F R NP S GS+ S P S+ R S ++
Sbjct: 637 --NSLAKSSSALTTERFYDRQSDNPLSIGSHQSVSNPATNSSSLHRRSEDSFLSGSHSSV 694
Query: 275 SH----GMDPMVPPNSDRIPFPYG-------SERPGHGPTFDRPPSPRSWT--PQGVGG- 320
++ G DP + P PFP S G T D + T P +
Sbjct: 695 NYSRSVGTDPYIRPED---PFPDRFNPSAGYSHNFGRRFTMDHSDNSHHLTEAPSRLWAS 751
Query: 321 ---GDPRGFDASSGFTPRNRP---VESGNHAAILTSTTIEVVIPQLYMAHVYGENNSNLS 374
PRG +SG R + SG+ +AI+T+TT+E+ +P M+ VYGE NL
Sbjct: 752 PPPAAPRGLSDASGGLSSARAGHVLGSGHKSAIVTNTTVEIRVPANAMSFVYGEQGYNLE 811
Query: 375 HIRQIS 380
+RQ+S
Sbjct: 812 QLRQVS 817
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 91/177 (51%), Gaps = 24/177 (13%)
Query: 52 FKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMR--- 108
F+LLC L VG++IGK G++++ Q TGA I++ + S +R++ I A+ +S+ R
Sbjct: 49 FRLLCPLSHVGAVIGKSGNVIKQLQQSTGAKIRVEEPPSGSPDRVITIIAQADSKSRVKL 108
Query: 109 ------------------HSPAQDAVMRVHSRIAEIGFEPGQAVVARLLVHSQQIGCLLG 150
S AQ A+++V +A VV RLL S G ++G
Sbjct: 109 GANNNGNAEGEKKEEEVEVSKAQGALIKVFELLA--AEADSDTVVCRLLTESSHAGAVIG 166
Query: 151 RGGHIVSEMRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLR 207
+GG +V +R+ TG I + ++ P C DE+V+V GN +V+ AL I+ L+
Sbjct: 167 KGGQMVGSIRKETGCKISIRIEN-LPICADTDDEMVEVEGNAIAVKKALVSISRCLQ 222
>gi|357128987|ref|XP_003566150.1| PREDICTED: KH domain-containing protein At4g18375-like
[Brachypodium distachyon]
Length = 729
Score = 189 bits (479), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 130/378 (34%), Positives = 189/378 (50%), Gaps = 53/378 (14%)
Query: 48 EEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEM 107
E + F+LLC DKVGS+IGKGG+ ++T Q +TG IKI + +P SE+R++VIS +
Sbjct: 393 EPLTFRLLCSSDKVGSIIGKGGNNIKTIQKDTGCEIKILETVPKSEDRVIVISGPAHPGD 452
Query: 108 RHSPAQDAVMRVHSRIAE-IGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGAS 166
SPAQ+A++ V RI A ++RL+V Q+GCLLG+GG I++EMR+ + A
Sbjct: 453 GISPAQNAILHVQRRITPPTANNKEGAAISRLIVSPNQVGCLLGKGGSIIAEMRKLSKAH 512
Query: 167 IRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFP--MKRPGPNNGHSY 224
I V KD+ P+ DE+VQ+ G+ ++Q+AL IT+RLR +F M GPN
Sbjct: 513 IVVLSKDKIPKGVQESDEVVQITGDSEAIQEALMQITARLRNHLFRDRMAAMGPN----M 568
Query: 225 LPPFPEMPPP--PFRPRHNPASPGSYPSPVGPFHSMDRGMGPSQPFDHQAAFSHGMDPMV 282
PPF + P F H SP YP+ FH G
Sbjct: 569 QPPFGSLDPQFGAFAGSHESTSPRIYPN-ASQFHKDFMG--------------------- 606
Query: 283 PPNSDRIPFPYGSERPGHGPTFDRPPSPRSWTPQGVGG-GDPRGFDASSGFTPRNRPVES 341
RP D P+P W +G+ GDP G R S
Sbjct: 607 --------------RP-----LDEMPAP--WNAKGMRDVGDPMSISGMPGMPHRGIGGFS 645
Query: 342 GNHAAILTSTTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATEGVVMVS 401
G + + + T ++++P+ + + G + L+ IR+ SGA + +P A + M+S
Sbjct: 646 GAGHSSMPNITRDIMVPRFVIPALCGHDGGCLNMIREFSGAMITFTEPIADAADTPFMIS 705
Query: 402 GTSDQMRAAQSLIHAFIL 419
GT DQM AA+SLI AF+L
Sbjct: 706 GTLDQMHAARSLIQAFVL 723
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 50/101 (49%), Gaps = 9/101 (8%)
Query: 114 DAVMRVHSRI--AEIGFEPGQA------VVARLLVHSQQIGCLLGRGGHIVSEMRRATGA 165
+A++ V RI EIG E G V RLLV Q+G LLG G ++ +M +G
Sbjct: 204 NAILHVFDRIFITEIGNESGDPSGERTPVSFRLLVLDSQVGWLLGNRGSVIKQMSADSGC 263
Query: 166 SIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRL 206
IRV K++ P C DE+ Q+ G SV+ L + L
Sbjct: 264 EIRV-SKEKLPLCALLKDELCQITGELDSVRKGLNAVAQVL 303
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 36/56 (64%)
Query: 51 VFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSE 106
+ ++LC +K G++IGKGG I+ + E G I++ + +P +ER++VI+ E +
Sbjct: 46 LIRILCPTEKCGNVIGKGGVIIAKIRQENGVKIRVDEAVPGCDERVIVITITEKDK 101
Score = 42.4 bits (98), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 24/99 (24%), Positives = 50/99 (50%), Gaps = 17/99 (17%)
Query: 114 DAVMRVHSRIAEIGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKD 173
DA+M H+ + P + + RLL S ++G ++G+GG+ + +++ TG I++ +
Sbjct: 381 DALMHSHASV------PPEPLTFRLLCSSDKVGSIIGKGGNNIKTIQKDTGCEIKIL--E 432
Query: 174 QAPRCGSPHDEIVQVIGNYH------SVQDALFHITSRL 206
P+ D ++ + G H Q+A+ H+ R+
Sbjct: 433 TVPKS---EDRVIVISGPAHPGDGISPAQNAILHVQRRI 468
>gi|226530329|ref|NP_001151982.1| nucleic acid binding protein [Zea mays]
gi|195651499|gb|ACG45217.1| nucleic acid binding protein [Zea mays]
gi|224029689|gb|ACN33920.1| unknown [Zea mays]
gi|413947861|gb|AFW80510.1| nucleic acid binding protein [Zea mays]
Length = 705
Score = 186 bits (472), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 128/379 (33%), Positives = 196/379 (51%), Gaps = 62/379 (16%)
Query: 48 EEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEM 107
E + F++LC DKVGS+IGKGG+IV+T QN+TG IK+ D +P +++RI+ IS +
Sbjct: 376 ESLSFRMLCPQDKVGSIIGKGGNIVKTIQNDTGCEIKVLDTVPKTDDRIISISGPAHPSD 435
Query: 108 RHSPAQDAVMRVHSRIAEIGFEPGQA-VVARLLVHSQQIGCLLGRGGHIVSEMRRATGAS 166
SPAQ+A++ V +I + + RL+V Q+GC+LG+GG I++EMR+ +GA
Sbjct: 436 GISPAQNAILHVQRKIMLPSSDKKEGPATCRLIVSGNQVGCVLGKGGSIIAEMRKLSGAF 495
Query: 167 IRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKRP--GPNNGHSY 224
I V KD+ PR HDE++Q+ G+ ++Q+AL +T+RLR +F + P GPN
Sbjct: 496 IVVLSKDKIPRGVPEHDEVIQINGSCEAIQEALMQVTARLRNHLFRDRMPAVGPN----M 551
Query: 225 LPPFPEMPPP--PFRPRHNPASPGSYPSPVGPFHSMDRGMGPSQPFDHQAA--FSHGMDP 280
PPF + P PF H +S FH G +P D AA GM
Sbjct: 552 RPPFGLLDPQFGPFSGNHESSS---------LFHKDFMG----RPLDGIAAPWTVKGMRD 598
Query: 281 MVPPNSDRIPFPYGSERPGHGPTFDRPPSPRSWTPQGVGGGDPRGFDASSGFTPRNRPVE 340
+ P S S+ PG G + GF +P
Sbjct: 599 LSDPVSI-------SDIPGA------------------------GHREAGGFPGPGQP-- 625
Query: 341 SGNHAAILTSTTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATEGVVMV 400
+++ + T EV++P+L + + GE+ L IR+ S A + V +P A + V++
Sbjct: 626 -----SMMPNLTAEVLVPRLVIPVLCGEDGGCLDRIREFSEAKITVAEPTADAMDTAVLI 680
Query: 401 SGTSDQMRAAQSLIHAFIL 419
SGT +QM AA+SL+ AF++
Sbjct: 681 SGTPEQMHAARSLVEAFVM 699
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 38/103 (36%), Positives = 49/103 (47%), Gaps = 9/103 (8%)
Query: 112 AQDAVMRVHSRI--AEIGFEPGQAVVA------RLLVHSQQIGCLLGRGGHIVSEMRRAT 163
A AV V RI E E G A A R+LV Q G LLG+GG +V +M
Sbjct: 203 ALKAVSLVFDRIFATEGNNETGNASAASAPVSLRMLVLYSQAGWLLGKGGSVVKQMAADN 262
Query: 164 GASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRL 206
G IRV KD P C +D++ Q+ G SV+ L ++ L
Sbjct: 263 GCEIRVL-KDNLPSCALLNDKLCQITGEIDSVRKGLNAVSEVL 304
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 51/98 (52%), Gaps = 4/98 (4%)
Query: 10 PAAEPFHQRGYAPGYHSRGYSSGPGHETVGGRNRMFYEEEV-VFKLLCHLDKVGSLIGKG 68
P+ PF +R + Y RG H + +++ E V +F++LC K G++IGKG
Sbjct: 7 PSKRPFQRR--SSDYDGRGKWQKTKHPSPH-KSQFKIEPGVPIFRILCPASKSGNVIGKG 63
Query: 69 GSIVRTFQNETGASIKIADILPDSEERIVVISARENSE 106
G+I+ + ET I++ P +ER++ I+A E
Sbjct: 64 GAIIAKIRQETRMRIRVDRAAPGCDERVIFITAANKDE 101
>gi|242055819|ref|XP_002457055.1| hypothetical protein SORBIDRAFT_03g000560 [Sorghum bicolor]
gi|241929030|gb|EES02175.1| hypothetical protein SORBIDRAFT_03g000560 [Sorghum bicolor]
Length = 716
Score = 186 bits (471), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 126/375 (33%), Positives = 190/375 (50%), Gaps = 53/375 (14%)
Query: 48 EEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEM 107
E + F++LC DKVGS+IGKGG+IV+T Q +TG IK+ D +P SE+RI+ IS +
Sbjct: 386 ESLSFRMLCPQDKVGSIIGKGGNIVKTIQKDTGCEIKVLDTVPKSEDRIISISGPAHPSD 445
Query: 108 RHSPAQDAVMRVHSRIAEIGFEPGQA-VVARLLVHSQQIGCLLGRGGHIVSEMRRATGAS 166
SPAQ+A++ V +I + + + RL+V + Q+GC+LG+GG I++EMR+ +GA
Sbjct: 446 GISPAQNAILHVQRKIMLPTSDKKEGPAICRLIVSANQVGCVLGKGGSIIAEMRKLSGAF 505
Query: 167 IRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKRPGPNNGHSYLP 226
I V KD+ PR HDE+VQ+ G+ ++Q+AL IT+RLR +F + R P G + P
Sbjct: 506 IIVLSKDKIPRGVPEHDEVVQISGSCEAIQEALMQITARLRNHLFRVDRM-PAMGPNMRP 564
Query: 227 PFPEMPPPPFRPRHNPASPGSYPSPVGPFHSMDRGMGPSQPFDHQAAFSHGMDPMVPPNS 286
PF G S GPF G S H+ +D + P
Sbjct: 565 PF-----------------GLLDSQFGPFA----GNHESPSLFHKDFMGRPLDGISAP-- 601
Query: 287 DRIPFPYGSERPGHGPTFDRPPSPRSWTPQGVGG-GDPRGFDASSGFTPRNRPVESG-NH 344
WT +G+ DP G R SG
Sbjct: 602 --------------------------WTVKGMRDLSDPLSISDIPGAGHREAGGFSGPGQ 635
Query: 345 AAILTSTTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATEGVVMVSGTS 404
+++ + T EV++P+L + + E+ L IR+ S A + V +P A + V++SGT
Sbjct: 636 PSMMPNLTAEVLVPRLIIPALCSEDGGCLDRIREFSEAKITVAEPIADAMDIPVLISGTP 695
Query: 405 DQMRAAQSLIHAFIL 419
DQM AA+SL+ AF++
Sbjct: 696 DQMHAARSLVQAFVM 710
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 49/103 (47%), Gaps = 9/103 (8%)
Query: 112 AQDAVMRVHSRIAEIG--FEPGQAVVA------RLLVHSQQIGCLLGRGGHIVSEMRRAT 163
A A+ V RI G E G A A RLLV Q G LLG+GG ++ +M
Sbjct: 214 ALKAISLVFDRIFAAGDNNETGNASAASTPVSLRLLVLYSQAGWLLGKGGSVIKQMSADN 273
Query: 164 GASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRL 206
G IRV +D P C +D++ Q+ G SV+ L ++ L
Sbjct: 274 GCEIRVL-RDNLPSCALLNDKLCQITGEIDSVRKGLNAVSELL 315
Score = 46.2 bits (108), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 49/99 (49%), Gaps = 6/99 (6%)
Query: 10 PAAEPFHQRGYAPGYHSRGYSSGPGHETVGGRNRMFYEEEVV--FKLLCHLDKVGSLIGK 67
P+ PF + + Y+ RG H + F E V F++LC K G++IGK
Sbjct: 7 PSKRPFQKN--SSDYNGRGKWQKTKHSSP--HKSQFKIEPGVPFFRILCPASKSGNVIGK 62
Query: 68 GGSIVRTFQNETGASIKIADILPDSEERIVVISARENSE 106
GG+I+ + ET I++ P +ER++ I+A + E
Sbjct: 63 GGAIIAKIREETRMRIRVDRAAPGCDERVIFITAVDKDE 101
Score = 42.0 bits (97), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 50/97 (51%), Gaps = 16/97 (16%)
Query: 130 PGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAPRCGSPHDEIVQVI 189
P +++ R+L ++G ++G+GG+IV +++ TG I+V D P+ D I+ +
Sbjct: 384 PIESLSFRMLCPQDKVGSIIGKGGNIVKTIQKDTGCEIKVL--DTVPKS---EDRIISIS 438
Query: 190 GNYH------SVQDALFHITSRLRETIFPM--KRPGP 218
G H Q+A+ H+ R+ + P K+ GP
Sbjct: 439 GPAHPSDGISPAQNAILHVQ---RKIMLPTSDKKEGP 472
>gi|294462548|gb|ADE76820.1| unknown [Picea sitchensis]
Length = 340
Score = 179 bits (454), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 133/380 (35%), Positives = 194/380 (51%), Gaps = 55/380 (14%)
Query: 54 LLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMRHSPAQ 113
+LC DK+G +IGKGGSI+ + ETGA+IK+ D +PD +ER++V+S++E + R SP
Sbjct: 1 MLCRNDKIGGVIGKGGSIINQIRQETGANIKVIDQVPDCDERVIVVSSKEFVDDRISPTL 60
Query: 114 DAVMRVHSRIAEIGFEPGQ--AVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFP 171
+AV+ + + +E E G+ + R LV S IGCLLG+GG I+SEMR+ T A+IR+
Sbjct: 61 EAVLHLQFKTSEKSIEEGKEGVITTRFLVPSNSIGCLLGKGGSIISEMRKRTRANIRIMS 120
Query: 172 KDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKRPGPNNGHSYLPPFPEM 231
KD P+C ++E+VQVIG ++AL I +RLR +F + G N G S +PP +
Sbjct: 121 KDNIPKCAGENEELVQVIGEVDVAREALIQIATRLRSNVFKDQDGGSNAG-SVVPPSLSL 179
Query: 232 -----PPPPFRPRHNPASPGSYPSPVGPFHSMDRGMGPSQPFDHQAA--FSHGMDPMVPP 284
P F G G +S+ PS + A+ +S +
Sbjct: 180 YGRGVPDSGF-------GRGDELGSTGRMYSL-----PSLGLEGTASGRYSSASYGSLGG 227
Query: 285 NSDRIPFPYGSERPGHGPTFDRPPSPRSWTPQGVGGGDPRGFDASSGFTPRNRPVESGNH 344
+ YGS +F +P P GV A SG
Sbjct: 228 VQNGGAGGYGSF-----SSFSTSRAPAGGLPAGV---------AKSG------------- 260
Query: 345 AAILTSTTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATEGVVMVSGTS 404
+T+EV IP + + G SN+S IR+ISGA V +++ KPG T+ VV +SGT
Sbjct: 261 ------STVEVTIPNKSVGSILGRGGSNISQIREISGAKVKLHESKPGGTDRVVEISGTP 314
Query: 405 DQMRAAQSLIHAFILCGVTS 424
+Q AAQSL+ AF + G S
Sbjct: 315 EQTHAAQSLLQAFAMSGQNS 334
>gi|125555220|gb|EAZ00826.1| hypothetical protein OsI_22856 [Oryza sativa Indica Group]
Length = 693
Score = 176 bits (446), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 115/374 (30%), Positives = 185/374 (49%), Gaps = 59/374 (15%)
Query: 48 EEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEM 107
++++F++LC DKV SL+G ++ Q + G I++ D L S+ERI++I++RE +
Sbjct: 337 DDIIFRILCPSDKVNSLVGTRDGLLEMLQEDVGVDIRLTDSLDGSDERIIIITSREGPDH 396
Query: 108 RHSPAQDAVMRVHSRIAEIGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASI 167
PAQ+A++ + + I ++G + + RLLV S +I C GR G + S+++R T A++
Sbjct: 397 ELFPAQEALLHLQTHIVDLGPDKDNIITTRLLVPSSEIACFEGRDGSL-SDIQRQTSANV 455
Query: 168 RVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKRPGPNN-GHSYLP 226
++ P+ P C DE++Q++G + +DAL IT++LR + F + PGPN G+ +
Sbjct: 456 QILPRQALPSCALESDELIQIVGEIRAARDALVQITAKLR-SYFYREIPGPNQLGNITV- 513
Query: 227 PFPEMPPPPFRPRHNPASPGSYPSPVGPFHSMDRGMGPSQPFDHQAAFSHGMDPMVPPNS 286
H SP SP GP+ D
Sbjct: 514 -------------HGSISPAK-GSPRGPYQGSD--------------------------- 532
Query: 287 DRIPFPYGSERPGHGPTFDRPPSPRSWTPQGVGGGDPRGFDASSGFTPRNRPVESGNHAA 346
IP P ++ H P SW + GGG F+ S R + A
Sbjct: 533 --IPMP-SYQQAQHVPA--------SW--KDSGGGANMSFEQGSNINDDMRQSAAKRFAV 579
Query: 347 -ILTSTTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATEGVVMVSGTSD 405
++T +T+EVVIP+ +A + S L+ I ++SGA V + D +P A E VV +SGT +
Sbjct: 580 PLVTRSTLEVVIPKSAVASLTMRAGSKLAQISEMSGATVTLADERPDAIEKVVRISGTPE 639
Query: 406 QMRAAQSLIHAFIL 419
Q AQSL+ FIL
Sbjct: 640 QADKAQSLLQGFIL 653
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/181 (35%), Positives = 96/181 (53%), Gaps = 25/181 (13%)
Query: 52 FKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVIS--ARENSEMR- 108
F++LC KV G S + +++T A + I P R++ S AR ++ R
Sbjct: 87 FRILCPQSKV---YGFPPSFIAKVRDDTNAVVTIHLPYPGDAVRVIETSDGARREADGRP 143
Query: 109 --HSPAQDAVMRVHSRIAEI----GFEPGQ------------AVVARLLVHSQQIGCLLG 150
SPAQ+A++ VH RI E G E G+ V RL+V +GCLLG
Sbjct: 144 PSFSPAQEALLMVHRRILETEPDDGDEDGEYGPRAKDARDRGKVTTRLIVPRLHVGCLLG 203
Query: 151 RGGHIVSEMRRATGASIRVFPKDQ-APRCGSPHDEIVQVIGNYHSVQDALFHITSRLRET 209
+GG I+ +MR T IR+ P+DQ PRC S +E+VQV+G + V+ A+ I+ RL+E+
Sbjct: 204 KGGKIIEQMRAETKTHIRILPRDQHTPRCVSLSEEVVQVVGEGNCVKKAVAIISDRLKES 263
Query: 210 I 210
+
Sbjct: 264 L 264
>gi|54290950|dbj|BAD61631.1| putative HEN4 [Oryza sativa Japonica Group]
Length = 662
Score = 176 bits (446), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 115/374 (30%), Positives = 185/374 (49%), Gaps = 59/374 (15%)
Query: 48 EEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEM 107
++++F++LC DKV SL+G ++ Q + G I++ D L S+ERI++I++RE +
Sbjct: 337 DDIIFRILCPSDKVNSLVGTRDGLLEMLQEDVGVDIRLTDSLDGSDERIIIITSREGPDH 396
Query: 108 RHSPAQDAVMRVHSRIAEIGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASI 167
PAQ+A++ + + I ++G + + RLLV S +I C GR G + S+++R T A++
Sbjct: 397 ELFPAQEALLHLQTHIVDLGPDKDNIITTRLLVPSSEIACFEGRDGSL-SDIQRQTSANV 455
Query: 168 RVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKRPGPNN-GHSYLP 226
++ P+ P C DE++Q++G + +DAL IT++LR + F + PGPN G+ +
Sbjct: 456 QILPRQALPSCALESDELIQIVGEIRAARDALVQITAKLR-SYFYREIPGPNQLGNITV- 513
Query: 227 PFPEMPPPPFRPRHNPASPGSYPSPVGPFHSMDRGMGPSQPFDHQAAFSHGMDPMVPPNS 286
H SP SP GP+ D
Sbjct: 514 -------------HGSISPAK-GSPRGPYQGSD--------------------------- 532
Query: 287 DRIPFPYGSERPGHGPTFDRPPSPRSWTPQGVGGGDPRGFDASSGFTPRNRPVESGNHAA 346
IP P ++ H P SW + GGG F+ S R + A
Sbjct: 533 --IPMP-SYQQAQHVPA--------SW--KDSGGGANMSFEQGSNINDDMRQSAAKRFAV 579
Query: 347 -ILTSTTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATEGVVMVSGTSD 405
++T +T+EVVIP+ +A + S L+ I ++SGA V + D +P A E VV +SGT +
Sbjct: 580 PLVTRSTLEVVIPKSAVASLTMRAGSKLAQISEMSGATVTLADERPDAIEKVVRISGTPE 639
Query: 406 QMRAAQSLIHAFIL 419
Q AQSL+ FIL
Sbjct: 640 QADKAQSLLQGFIL 653
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/181 (35%), Positives = 96/181 (53%), Gaps = 25/181 (13%)
Query: 52 FKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVIS--ARENSEMR- 108
F++LC KV G S + +++T A + I P R++ S AR ++ R
Sbjct: 87 FRILCPQSKV---YGFPPSFIAKVRDDTNAVVTIHLPYPGDAVRVIETSDGARREADGRP 143
Query: 109 --HSPAQDAVMRVHSRIAEI----GFEPGQ------------AVVARLLVHSQQIGCLLG 150
SPAQ+A++ VH RI E G E G+ V RL+V +GCLLG
Sbjct: 144 PSFSPAQEALLMVHRRILETEPDDGDEDGEYGPRAKDARDRGKVTTRLIVPRLHVGCLLG 203
Query: 151 RGGHIVSEMRRATGASIRVFPKDQ-APRCGSPHDEIVQVIGNYHSVQDALFHITSRLRET 209
+GG I+ +MR T IR+ P+DQ PRC S +E+VQV+G + V+ A+ I+ RL+E+
Sbjct: 204 KGGKIIEQMRAETKTHIRILPRDQHTPRCVSLSEEVVQVVGEGNCVKKAVAIISDRLKES 263
Query: 210 I 210
+
Sbjct: 264 L 264
>gi|297596401|ref|NP_001042525.2| Os01g0235800 [Oryza sativa Japonica Group]
gi|56783855|dbj|BAD81267.1| HEN4 -like [Oryza sativa Japonica Group]
gi|255673037|dbj|BAF04439.2| Os01g0235800 [Oryza sativa Japonica Group]
Length = 449
Score = 175 bits (443), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 131/376 (34%), Positives = 193/376 (51%), Gaps = 49/376 (13%)
Query: 48 EEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEM 107
E + F+LLC DKVG +IGKGG+ +++ QN+TG IK+ D +P SE+RIV IS +
Sbjct: 113 EPLTFRLLCSSDKVGGIIGKGGNNIKSIQNDTGCEIKVLDTVPKSEDRIVFISGPAHPGD 172
Query: 108 RHSPAQDAVMRVHSRIAEIGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASI 167
SPAQ+A++ V +I + RL+V Q+GCLLG+GG I++EMR+ +GA I
Sbjct: 173 GISPAQNAILHVQRKIVPTSNTKEGPAICRLIVSPNQVGCLLGKGGSIIAEMRKLSGAHI 232
Query: 168 RVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFP--MKRPGPNNGHSYL 225
V KD+ P+ +DE+VQ+ G ++Q+AL IT+RLR +F M PN
Sbjct: 233 IVLSKDKIPKGVPENDEVVQISGASEAIQEALMQITARLRNHLFRDRMASTVPN----VQ 288
Query: 226 PPFPEMPPPPFRPRHNPASPGSYPSPVGPFHSMDRGMGPSQPFDHQAAFSHGMDPMVPPN 285
PPF + P F GSY G S+ + P+ P H+ +D M P
Sbjct: 289 PPF-GLVDPQF---------GSY---AGNHDSISPRIFPNVPQFHKDFIGRPLDEMSAP- 334
Query: 286 SDRIPFPYGSERPGHGPTFDRPPSPRSWTPQGVGG-GDPRGFDASSGFTPRNRPVESG-N 343
WT +G+ GDP G R G
Sbjct: 335 ---------------------------WTMKGMQVVGDPISLPDIPGMAHRGMGGFPGPG 367
Query: 344 HAAILTSTTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATEGVVMVSGT 403
+I+++ T +V++P+L + + GE+ L+ IR+ SGA + V DP A + +++SGT
Sbjct: 368 QPSIVSTITADVMVPKLVLPSLCGEDGGCLNRIREFSGAKITVADPMGNAMDTAILISGT 427
Query: 404 SDQMRAAQSLIHAFIL 419
DQM AA+SLI AF+L
Sbjct: 428 PDQMHAARSLIQAFVL 443
>gi|449456987|ref|XP_004146230.1| PREDICTED: KH domain-containing protein At4g18375-like [Cucumis
sativus]
gi|449517605|ref|XP_004165836.1| PREDICTED: KH domain-containing protein At4g18375-like [Cucumis
sativus]
Length = 666
Score = 175 bits (443), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 122/418 (29%), Positives = 202/418 (48%), Gaps = 46/418 (11%)
Query: 3 VQGNPYPPAAEPFHQRGYAPGYHSRGYSSGPGHETVGGRNRMFYEEEVVFKLLCHLDKVG 62
+ G P+ P + RG + PG V FY E++VFK+LC ++KV
Sbjct: 287 MDGRPFRPRMSASNTRGNDYSSRQSNFMVEPGAAPVNDNMMPFYGEDLVFKILCPIEKVD 346
Query: 63 SLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMRHSPAQDAVMRVHSR 122
S+IG+ I+ +N+ G IK++D + S E+I++IS+ E + PAQ+A++ + +R
Sbjct: 347 SVIGESNGIIELLRNDVGVDIKVSDPVTGSNEQILIISSDEGPDDELFPAQEALLHIQTR 406
Query: 123 IAEIGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAPRCGSPH 182
I ++ + V RLLV S IGCL GR G ++ EM+R TGA++ + P++ P S
Sbjct: 407 IVDLVPDKENIVTTRLLVPSSDIGCLEGRDGSLL-EMKRLTGANVHIVPREDLPMFVSGA 465
Query: 183 DEIVQVIGNYHSVQDALFHITSRLRETIFPMKRPGPNNGHSYLPPFPEMPPPPFRPRHNP 242
DE+VQ+IG+ + +DAL +TSRLR + Y PF + P +
Sbjct: 466 DELVQIIGDIKAARDALVELTSRLRNCL-------------YKEPFQKDASPQVSVQSTM 512
Query: 243 ASPGSYPSPVGPFHSMDRGMGPSQPFDHQAAFSHGMDPMVPPNSDRIPFPYGSERPGHGP 302
S G + ++ ++ V +D + + +P G
Sbjct: 513 VSLG---------------------LEESSSNNNAAAREVHSGNDSASTAFQNVQP-FGT 550
Query: 303 TFDRPPSPRSWTPQGVGGGDPRGFDASSGFTPRNR-PVESGNHAAILTSTTIEVVIPQLY 361
+ S G + R D SG NR PV ++T +T+EVVIP+
Sbjct: 551 AQLLKETGGSSNETGTQNENDRREDLPSGL---NRIPV------PLVTRSTLEVVIPEPA 601
Query: 362 MAHVYGENNSNLSHIRQISGANVVVNDPKPGATEGVVMVSGTSDQMRAAQSLIHAFIL 419
+ + ++ + L+ I ++SGANV + + +P T+ ++ +SGT +Q AQSL+ FIL
Sbjct: 602 VPKLITKSKNKLAQISELSGANVTLVEDRPDVTQKIIQISGTPEQAERAQSLLQGFIL 659
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 111/403 (27%), Positives = 173/403 (42%), Gaps = 97/403 (24%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISA--RENSEM 107
+++LCH K G +IGK GSI+++ + TGA I + +++P EERI+ IS R + E
Sbjct: 60 TTYRILCHDAKAGGVIGKSGSIIKSIRQHTGAWINVHELVPGDEERIIEISDTRRRDPEG 119
Query: 108 R---HSPAQDAVMRVHSRIAEIGFEPG---------------------------QAVVAR 137
R SPAQ+A+ +H RI E PG V R
Sbjct: 120 RMPSFSPAQEALFLIHERILESEMSPGFNGMGYGPEDEEDDYGGVRGGGGGGCGGRVATR 179
Query: 138 LLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKD-QAPRCGSPHDEIVQVIGNYHSVQ 196
L+V +GCLLG+GG I+ +MR T IR+ P+D PRC S +EIVQ++G+ ++V+
Sbjct: 180 LVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHNLPRCISMSEEIVQIVGDTNAVK 239
Query: 197 DALFHITSRLRETIFPMKRPGPNNGHSYLPPFPEMPPPPFRPRHNPASPGSYPSPVGPFH 256
A+ ++SRLRE+ + H + G H
Sbjct: 240 KAIAIVSSRLRES------QHRDRSHFH----------------------------GRLH 265
Query: 257 SMDRGMGPSQPFDHQAAFSHGMDPMVPPNSDRIPFPYGSERPGHGPTFDRPPSPRSWTPQ 316
S +R P D VP N+ R+P RP PR +
Sbjct: 266 SPERIFPPE-------------DDYVPHNARRLPMD------------GRPFRPR-MSAS 299
Query: 317 GVGGGDPRGFDASSGFTPRNRPVESGNHAAILTSTTIEVVIPQLYMAHVYGENNSNLSHI 376
G D ++ P PV +++ P + V GE+N + +
Sbjct: 300 NTRGNDYSSRQSNFMVEPGAAPVNDNMMPFYGEDLVFKILCPIEKVDSVIGESNGIIELL 359
Query: 377 RQISGANVVVNDPKPGATEGVVMVS---GTSDQMRAAQ-SLIH 415
R G ++ V+DP G+ E ++++S G D++ AQ +L+H
Sbjct: 360 RNDVGVDIKVSDPVTGSNEQILIISSDEGPDDELFPAQEALLH 402
>gi|222618061|gb|EEE54193.1| hypothetical protein OsJ_01028 [Oryza sativa Japonica Group]
Length = 748
Score = 174 bits (442), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 131/376 (34%), Positives = 193/376 (51%), Gaps = 49/376 (13%)
Query: 48 EEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEM 107
E + F+LLC DKVG +IGKGG+ +++ QN+TG IK+ D +P SE+RIV IS +
Sbjct: 412 EPLTFRLLCSSDKVGGIIGKGGNNIKSIQNDTGCEIKVLDTVPKSEDRIVFISGPAHPGD 471
Query: 108 RHSPAQDAVMRVHSRIAEIGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASI 167
SPAQ+A++ V +I + RL+V Q+GCLLG+GG I++EMR+ +GA I
Sbjct: 472 GISPAQNAILHVQRKIVPTSNTKEGPAICRLIVSPNQVGCLLGKGGSIIAEMRKLSGAHI 531
Query: 168 RVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFP--MKRPGPNNGHSYL 225
V KD+ P+ +DE+VQ+ G ++Q+AL IT+RLR +F M PN
Sbjct: 532 IVLSKDKIPKGVPENDEVVQISGASEAIQEALMQITARLRNHLFRDRMASTVPN----VQ 587
Query: 226 PPFPEMPPPPFRPRHNPASPGSYPSPVGPFHSMDRGMGPSQPFDHQAAFSHGMDPMVPPN 285
PPF + P F GSY G S+ + P+ P H+ +D M P
Sbjct: 588 PPFG-LVDPQF---------GSY---AGNHDSISPRIFPNVPQFHKDFIGRPLDEMSAP- 633
Query: 286 SDRIPFPYGSERPGHGPTFDRPPSPRSWTPQGVGG-GDPRGFDASSGFTPRNRPVESG-N 343
WT +G+ GDP G R G
Sbjct: 634 ---------------------------WTMKGMQVVGDPISLPDIPGMAHRGMGGFPGPG 666
Query: 344 HAAILTSTTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATEGVVMVSGT 403
+I+++ T +V++P+L + + GE+ L+ IR+ SGA + V DP A + +++SGT
Sbjct: 667 QPSIVSTITADVMVPKLVLPSLCGEDGGCLNRIREFSGAKITVADPMGNAMDTAILISGT 726
Query: 404 SDQMRAAQSLIHAFIL 419
DQM AA+SLI AF+L
Sbjct: 727 PDQMHAARSLIQAFVL 742
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 48/103 (46%), Gaps = 9/103 (8%)
Query: 112 AQDAVMRVHSRIAEIGFEPGQA--------VVARLLVHSQQIGCLLGRGGHIVSEMRRAT 163
A A++ V RI E G V RLLV Q+G LLG+ G ++ +M +
Sbjct: 245 AVKAILLVFDRIFVNEMENGTGDASGERNHVSLRLLVLDSQVGWLLGKNGSVIKQMSTDS 304
Query: 164 GASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRL 206
IRV KD+ P C P DE+ Q+ G SV+ L + L
Sbjct: 305 CCEIRV-SKDKLPLCALPRDELCQITGELDSVRKGLNTVAQLL 346
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 42/60 (70%), Gaps = 1/60 (1%)
Query: 51 VFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISA-RENSEMRH 109
+F++LC K G++IGKGG I+ + ETG I++ +++P +ER++VI+A ++ E+ H
Sbjct: 89 IFRILCPTSKSGNVIGKGGGIIAKIRQETGVKIRVDEVVPGCDERVIVITAIDKDREVSH 148
>gi|168013158|ref|XP_001759268.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162689581|gb|EDQ75952.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 427
Score = 174 bits (442), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 90/200 (45%), Positives = 127/200 (63%), Gaps = 3/200 (1%)
Query: 13 EPFHQRGYAPGYHSRGYSSGPGHETVGGRNRMFYEEEVVFKLLCHLDKVGSLIGKGGSIV 72
EP R + + + GR+ E E+VF+LLC DK+GS+IGKGGSI+
Sbjct: 225 EPLEGRSWTISSGNLSLDRQDNRRSKEGRDS--GENELVFRLLCPSDKIGSVIGKGGSII 282
Query: 73 RTFQNETGASIKIADILPDSEERIVVISARENSEMRHSPAQDAVMRVHSRI-AEIGFEPG 131
+ +TGA IKIA+ +P S+ER++++SA E SPA +A+++V SRI AE+G +
Sbjct: 283 HNLRKDTGARIKIANAVPGSDERVIIVSALELPGDSFSPALEAMIQVQSRITAEMGGDKD 342
Query: 132 QAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAPRCGSPHDEIVQVIGN 191
+ RLLV + QIGCLLG+GG I+ +MRRAT A+IRV PKD PRC DE+VQ++G+
Sbjct: 343 GIITTRLLVPTNQIGCLLGKGGSIIEDMRRATRANIRVLPKDTLPRCALDTDELVQIVGD 402
Query: 192 YHSVQDALFHITSRLRETIF 211
++ALF + SRLR F
Sbjct: 403 TTVAREALFQVISRLRNNAF 422
Score = 172 bits (435), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 126/376 (33%), Positives = 185/376 (49%), Gaps = 88/376 (23%)
Query: 48 EEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARE---- 103
++VVF++LC K+GS+IGKGGSI++T + E+GA IKIAD +P +ER+++IS+ +
Sbjct: 1 DDVVFRILCPAPKIGSVIGKGGSIIKTLRQESGAKIKIADAIPGVDERVILISSTDRGND 60
Query: 104 -------NSEMRHSPAQDAVMRVHSRI-----------AEIGFEPGQAVVARLLVHSQQI 145
NSE +PAQ+A+ +VH+RI ++ EP Q VV RLLV + QI
Sbjct: 61 RGRGKDGNSE-ELTPAQEALFKVHARIIADVETSGIDGSDQEEEPSQQVVTRLLVPNNQI 119
Query: 146 GCLLGRGGHIVSEMRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSR 205
GCLLG+GG I+ +MR+ TGA IRV PKDQ P C P DE+VQV G+ +++ AL I++R
Sbjct: 120 GCLLGKGGKIIEQMRQTTGAQIRVLPKDQLPGCALPTDELVQVSGDVSTLKKALLFISAR 179
Query: 206 LRETIFPMKRPGPNNGHSYLPPFPEMPPPPFRPRHNPASPGSYPSPVGPFHSMDRGMGPS 265
L+E P RP SY P P F P + + SY S G H G+GP
Sbjct: 180 LQEN-PPRDRP-----QSY-----AAPAPAFVPVTDYLAKDSYRSK-GTGHVF--GLGPE 225
Query: 266 QPFDHQAAFSHGMDPMVPPNSDRIPFPYGSERPGHGPTFDRPPSPRSWTPQGVGGGDPRG 325
P RSWT + G+
Sbjct: 226 -----------------------------------------PLEGRSWT---ISSGNL-S 240
Query: 326 FDASSGFTPRNRPVESGNHAAILTSTTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVV 385
D NR + G + ++ P + V G+ S + ++R+ +GA +
Sbjct: 241 LDRQD-----NRRSKEGRDSG-ENELVFRLLCPSDKIGSVIGKGGSIIHNLRKDTGARIK 294
Query: 386 VNDPKPGATEGVVMVS 401
+ + PG+ E V++VS
Sbjct: 295 IANAVPGSDERVIIVS 310
>gi|218187831|gb|EEC70258.1| hypothetical protein OsI_01061 [Oryza sativa Indica Group]
Length = 722
Score = 174 bits (441), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 131/376 (34%), Positives = 193/376 (51%), Gaps = 49/376 (13%)
Query: 48 EEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEM 107
E + F+LLC DKVG +IGKGG+ +++ QN+TG IK+ D +P SE+RIV IS +
Sbjct: 386 EPLTFRLLCSSDKVGGIIGKGGNNIKSIQNDTGCEIKVLDTVPKSEDRIVFISGPAHPGD 445
Query: 108 RHSPAQDAVMRVHSRIAEIGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASI 167
SPAQ+A++ V +I + RL+V Q+GCLLG+GG I++EMR+ +GA I
Sbjct: 446 GISPAQNAILHVQRKIVPTSNTKEGPAICRLIVSPNQVGCLLGKGGSIIAEMRKLSGAHI 505
Query: 168 RVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFP--MKRPGPNNGHSYL 225
V KD+ P+ +DE+VQ+ G ++Q+AL IT+RLR +F M PN
Sbjct: 506 IVLSKDKIPKGVPENDEVVQISGASEAIQEALMQITARLRNHLFRDRMASTVPN----VQ 561
Query: 226 PPFPEMPPPPFRPRHNPASPGSYPSPVGPFHSMDRGMGPSQPFDHQAAFSHGMDPMVPPN 285
PPF + P F GSY G S+ + P+ P H+ +D M P
Sbjct: 562 PPFG-LVDPQF---------GSY---AGNHDSISPRIFPNVPQFHKDFIGRPLDEMSAP- 607
Query: 286 SDRIPFPYGSERPGHGPTFDRPPSPRSWTPQGVGG-GDPRGFDASSGFTPRNRPVESG-N 343
WT +G+ GDP G R G
Sbjct: 608 ---------------------------WTMKGMQVVGDPISLPDIPGMAHRGMGGFPGPG 640
Query: 344 HAAILTSTTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATEGVVMVSGT 403
+I+++ T +V++P+L + + GE+ L+ IR+ SGA + V DP A + +++SGT
Sbjct: 641 QPSIVSTITADVMVPKLVLPSLCGEDGGCLNRIREFSGAKITVADPMGNAMDTAILISGT 700
Query: 404 SDQMRAAQSLIHAFIL 419
DQM AA+SLI AF+L
Sbjct: 701 PDQMHAARSLIQAFVL 716
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 42/60 (70%), Gaps = 1/60 (1%)
Query: 51 VFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISA-RENSEMRH 109
+F++LC K G++IGKGG I+ + ETG I++ +++P +ER++VI+A ++ E+ H
Sbjct: 89 IFRILCPTSKSGNVIGKGGGIIAKIRQETGVKIRVDEVVPGCDERVIVITAIDKDREVSH 148
>gi|356528011|ref|XP_003532599.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine
max]
Length = 433
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 88/174 (50%), Positives = 120/174 (68%), Gaps = 8/174 (4%)
Query: 46 YEEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENS 105
Y++EV F+++C D+VG++IGKGGSIVR QNE+GA I + L + E+R+V I+A EN
Sbjct: 109 YQQEVTFRIICSNDRVGAVIGKGGSIVRALQNESGAIISVGPSLVECEDRLVTITASENP 168
Query: 106 EMRHSPAQDAVMRVHSRIAEIGFEPGQA--------VVARLLVHSQQIGCLLGRGGHIVS 157
E +SPAQ AV+ V S+ E G E G V ARL+V S Q+GCLLG+GG IVS
Sbjct: 169 ESTYSPAQKAVVLVFSKSVEAGVEKGLELGSKKEPYVTARLVVPSNQVGCLLGKGGAIVS 228
Query: 158 EMRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIF 211
EMR+ATGA+IRV DQ P C S +D++VQ+ G + +VQ A+ + T RLR+ +F
Sbjct: 229 EMRKATGANIRVIGNDQVPMCVSDNDQLVQISGVFSNVQAAIHNATGRLRDHLF 282
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 55/122 (45%), Positives = 81/122 (66%), Gaps = 3/122 (2%)
Query: 303 TFDRPPSPRSWTPQGVGGGDPRGFD-ASSGFTPRNRPVE--SGNHAAILTSTTIEVVIPQ 359
+ +R P PQ V G + RG + S G R +E SG+ AI+T+TT+++V+P
Sbjct: 310 SLNRHSLPGLQAPQTVAGINSRGTNGVSRGLISRKGGLELISGSKTAIVTNTTVQIVVPD 369
Query: 360 LYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATEGVVMVSGTSDQMRAAQSLIHAFIL 419
+ VYGEN SNL+ +RQISGA V+V++P+PG ++ +++SGT D+ RAAQSL+ AFIL
Sbjct: 370 DVIGSVYGENGSNLARLRQISGAKVIVHEPRPGTSDRTIIISGTPDETRAAQSLLQAFIL 429
Query: 420 CG 421
G
Sbjct: 430 AG 431
>gi|224118310|ref|XP_002317787.1| predicted protein [Populus trichocarpa]
gi|222858460|gb|EEE96007.1| predicted protein [Populus trichocarpa]
Length = 655
Score = 172 bits (435), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 121/400 (30%), Positives = 192/400 (48%), Gaps = 53/400 (13%)
Query: 24 YHSR--GYSSGPGHETVGGRNRMFYEEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGA 81
Y SR G+++ G + + + FY E++VF++LC +DK+ ++G+ IV QNE G
Sbjct: 298 YSSRASGFAADAGADPIADSAQPFYVEDLVFRILCPIDKLNRVVGESDGIVDLLQNEIGV 357
Query: 82 SIKIADILPDSEERIVVISARENSEMRHSPAQDAVMRVHSRIAEIGFEPGQAVVARLLVH 141
+K+AD + S+E+I+ I + E + PAQ+A++ + +RI ++ + RLLV
Sbjct: 358 DVKVADPVSGSDEQIITIFSEEGPDDELFPAQEALLHIQTRIVDLVPDNDHITTTRLLVR 417
Query: 142 SQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFH 201
S +IGCL GR + SE+ R TGA+I + PK++ P S DEIVQ+ G + +DAL
Sbjct: 418 SSEIGCLEGRDASL-SEIERLTGATIEILPKEKLPSYLSGIDEIVQIEGEIRAARDALVE 476
Query: 202 ITSRLRETIFPMKRPGPNNGHSYLPPFPEMPPPPFRPRHNPASPGSYPSPVGPFHSMDRG 261
+TSRLR I+ + LP P + P ASP P+ GP
Sbjct: 477 VTSRLRSYIY------KDVFEKDLP--PPVSAPGLAGGMQAASPSPTPAREGP------- 521
Query: 262 MGPSQPFDHQAAFSHGMDPMVPPNSDRIPFPYGSERPGHGPTFDRPPSPRSWTPQGVGGG 321
+G P +Q S P P R + S R
Sbjct: 522 IGGDPPASYQNVQSAAT-----------PQPSKDARGSSVEAVKQNESERR--------- 561
Query: 322 DPRGFDASSGFTPRNRPVESGNH--AAILTSTTIEVVIPQLYMAHVYGENNSNLSHIRQI 379
PV + N ++T +T+EVVIP+ + + ++ + L+ I ++
Sbjct: 562 -------------EELPVTTMNRIPVTLVTRSTLEVVIPEPAVPKLITKSKNKLAQISEL 608
Query: 380 SGANVVVNDPKPGATEGVVMVSGTSDQMRAAQSLIHAFIL 419
SGANV + + +P E ++ +SGT +Q AQSL+ FIL
Sbjct: 609 SGANVTLVEDRPDVKEKIIKISGTPEQAERAQSLLQGFIL 648
Score = 128 bits (322), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 74/183 (40%), Positives = 107/183 (58%), Gaps = 25/183 (13%)
Query: 52 FKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISA--RENSEMR- 108
+++LCH K G +IGK GSI+++ + TGA I + +++P EERI+ IS R + E R
Sbjct: 62 YRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTRRRDPEGRM 121
Query: 109 --HSPAQDAVMRVHSRIAEI------------GFEP-------GQAVVARLLVHSQQIGC 147
SPAQ+A+ +H RI E G E G V RL+V +GC
Sbjct: 122 PSFSPAQEALFLIHDRILENDLQYGVVSSGVGGLEEDEYVGRGGNRVATRLVVSRMHVGC 181
Query: 148 LLGRGGHIVSEMRRATGASIRVFPKDQA-PRCGSPHDEIVQVIGNYHSVQDALFHITSRL 206
LLG+GG I+ +MR T IR+ P+D PRC S +EIVQV+G+ +V++A+ I+SRL
Sbjct: 182 LLGKGGKIIEQMRMETKTQIRILPRDHTLPRCVSMSEEIVQVVGDVSAVKNAVAIISSRL 241
Query: 207 RET 209
RE+
Sbjct: 242 RES 244
>gi|302143921|emb|CBI23026.3| unnamed protein product [Vitis vinifera]
Length = 575
Score = 171 bits (434), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 117/407 (28%), Positives = 196/407 (48%), Gaps = 63/407 (15%)
Query: 18 RGYAPGYHSRGYSSGPGHETVGGRNRMFYEEEVVFKLLCHLDKVGSLIGKGGSIVRTFQN 77
R + + GY+ G + + F E++VF++LC +DKV ++G+ I+ QN
Sbjct: 220 RSNSFASRTSGYTLESGAAPIADNAQQFLGEDIVFRILCPVDKVECVVGESDGIIELLQN 279
Query: 78 ETGASIKIADILPDSEERIVVISARENSEMRHSPAQDAVMRVHSRIAEIGFEPGQAVVAR 137
E G +K+AD + S E+I+VI++ E + PAQ+A++ + +RI + + + R
Sbjct: 280 EIGVDVKVADHVAGSNEQIIVITSEEGPDDELFPAQEALLHIQTRIVNLLPDKENVITTR 339
Query: 138 LLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQD 197
LLV S +IGC GR + SEMRR TGA+I++ P++Q P S DE+++++G + +D
Sbjct: 340 LLVPSSEIGCFEGRDCSL-SEMRRLTGANIQIVPREQLPAFISGTDELLEIVGEIKAARD 398
Query: 198 ALFHITSRLRETIFPMKRPGPNNGHSYLPPFPEMPPPPFRPRHNPASPGSYPSPVGPFHS 257
AL +TSRLR ++ + P +MPPP ++PGS
Sbjct: 399 ALVEVTSRLRSYLY----------REFFP--KDMPPPSI------SAPGSL--------- 431
Query: 258 MDRGMGPSQPFDHQAAFSHGMDPMVPPNSDRIPFPYGSERPGHGPTFDRPPSPRSWTPQG 317
+A+ + + P R GH T PP+ Q
Sbjct: 432 -------------EASSPNNITPA---------------REGH--TASDPPTTNYQNVQA 461
Query: 318 VGGGDPRGFDASSG--FTPRNRPVESGNH---AAILTSTTIEVVIPQLYMAHVYGENNSN 372
+ P +G +N V S + ++T +T+EVVIP+ + + + +
Sbjct: 462 IASVQPSKDSGGTGGETVKQNETVPSVLNRIPVTLVTRSTLEVVIPEHAVPKLITRSKNK 521
Query: 373 LSHIRQISGANVVVNDPKPGATEGVVMVSGTSDQMRAAQSLIHAFIL 419
L+ I + SGANV + + + AT ++ +SGT +Q AQSL+ FIL
Sbjct: 522 LAQISEWSGANVTLLEDRLEATGKIIQISGTPEQTEKAQSLLQGFIL 568
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 73/166 (43%), Positives = 109/166 (65%), Gaps = 14/166 (8%)
Query: 52 FKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISA--RENSEMR- 108
+++LCH K G +IGK GSI+++ + TGA I + +++P EERI+ IS R + E R
Sbjct: 6 YRILCHDVKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTRRRDPEGRM 65
Query: 109 --HSPAQDAVMRVHSRIAE--IGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATG 164
SPAQ+A+ +H RI E GF G VV+R+ +GCLLG+GG I+ +MR T
Sbjct: 66 PQFSPAQEALFMIHDRILESDAGFGNGM-VVSRM-----HVGCLLGKGGKIIEQMRIETK 119
Query: 165 ASIRVFPKD-QAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRET 209
IR+ P+D PRC S +EIVQV+G+ ++V++A+ +I+SRLRE+
Sbjct: 120 TQIRILPRDHNLPRCVSMSEEIVQVVGDVNAVKNAIANISSRLRES 165
>gi|225455340|ref|XP_002272224.1| PREDICTED: KH domain-containing protein At4g18375-like [Vitis
vinifera]
Length = 661
Score = 171 bits (434), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 117/407 (28%), Positives = 196/407 (48%), Gaps = 63/407 (15%)
Query: 18 RGYAPGYHSRGYSSGPGHETVGGRNRMFYEEEVVFKLLCHLDKVGSLIGKGGSIVRTFQN 77
R + + GY+ G + + F E++VF++LC +DKV ++G+ I+ QN
Sbjct: 306 RSNSFASRTSGYTLESGAAPIADNAQQFLGEDIVFRILCPVDKVECVVGESDGIIELLQN 365
Query: 78 ETGASIKIADILPDSEERIVVISARENSEMRHSPAQDAVMRVHSRIAEIGFEPGQAVVAR 137
E G +K+AD + S E+I+VI++ E + PAQ+A++ + +RI + + + R
Sbjct: 366 EIGVDVKVADHVAGSNEQIIVITSEEGPDDELFPAQEALLHIQTRIVNLLPDKENVITTR 425
Query: 138 LLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQD 197
LLV S +IGC GR + SEMRR TGA+I++ P++Q P S DE+++++G + +D
Sbjct: 426 LLVPSSEIGCFEGRDCSL-SEMRRLTGANIQIVPREQLPAFISGTDELLEIVGEIKAARD 484
Query: 198 ALFHITSRLRETIFPMKRPGPNNGHSYLPPFPEMPPPPFRPRHNPASPGSYPSPVGPFHS 257
AL +TSRLR ++ + P +MPPP ++PGS
Sbjct: 485 ALVEVTSRLRSYLY----------REFFP--KDMPPPSI------SAPGSL--------- 517
Query: 258 MDRGMGPSQPFDHQAAFSHGMDPMVPPNSDRIPFPYGSERPGHGPTFDRPPSPRSWTPQG 317
+A+ + + P R GH T PP+ Q
Sbjct: 518 -------------EASSPNNITPA---------------REGH--TASDPPTTNYQNVQA 547
Query: 318 VGGGDPRGFDASSG--FTPRNRPVESGNH---AAILTSTTIEVVIPQLYMAHVYGENNSN 372
+ P +G +N V S + ++T +T+EVVIP+ + + + +
Sbjct: 548 IASVQPSKDSGGTGGETVKQNETVPSVLNRIPVTLVTRSTLEVVIPEHAVPKLITRSKNK 607
Query: 373 LSHIRQISGANVVVNDPKPGATEGVVMVSGTSDQMRAAQSLIHAFIL 419
L+ I + SGANV + + + AT ++ +SGT +Q AQSL+ FIL
Sbjct: 608 LAQISEWSGANVTLLEDRLEATGKIIQISGTPEQTEKAQSLLQGFIL 654
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 71/183 (38%), Positives = 107/183 (58%), Gaps = 25/183 (13%)
Query: 52 FKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISA--RENSEMR- 108
+++LCH K G +IGK GSI+++ + TGA I + +++P EERI+ IS R + E R
Sbjct: 69 YRILCHDVKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTRRRDPEGRM 128
Query: 109 --HSPAQDAVMRVHSRIAE-------------------IGFEPGQAVVARLLVHSQQIGC 147
SPAQ+A+ +H RI E G V R++V +GC
Sbjct: 129 PQFSPAQEALFMIHDRILESDAGFGNGFGGNGDDDDDFGPRGGGNRVATRMVVSRMHVGC 188
Query: 148 LLGRGGHIVSEMRRATGASIRVFPKD-QAPRCGSPHDEIVQVIGNYHSVQDALFHITSRL 206
LLG+GG I+ +MR T IR+ P+D PRC S +EIVQV+G+ ++V++A+ +I+SRL
Sbjct: 189 LLGKGGKIIEQMRIETKTQIRILPRDHNLPRCVSMSEEIVQVVGDVNAVKNAIANISSRL 248
Query: 207 RET 209
RE+
Sbjct: 249 RES 251
>gi|356519471|ref|XP_003528396.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine
max]
Length = 591
Score = 171 bits (433), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 86/175 (49%), Positives = 121/175 (69%), Gaps = 9/175 (5%)
Query: 46 YEEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARE-N 104
++EV F+++C D+VG++IGKGGSIVR QNE+GA I L + E+R+V I+A E N
Sbjct: 266 LQQEVTFRIICSNDRVGAVIGKGGSIVRALQNESGAIISFGPSLVECEDRLVTITASEQN 325
Query: 105 SEMRHSPAQDAVMRVHSRIAEIGFEPG--------QAVVARLLVHSQQIGCLLGRGGHIV 156
E R+SPAQ AV+ V S+ E G E G V A+L+V S Q+GCLLG+GG IV
Sbjct: 326 PESRYSPAQKAVVLVFSKSVEAGVEKGLDMGSKKESYVTAQLVVPSNQVGCLLGKGGAIV 385
Query: 157 SEMRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIF 211
SEMR+ATGA+IRV D+ P+C S +D++VQ+ G + +VQ A+++ T RLR+ +F
Sbjct: 386 SEMRKATGANIRVIGNDKVPKCVSDNDQLVQISGEFSNVQAAIYNATGRLRDNLF 440
Score = 124 bits (311), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 67/170 (39%), Positives = 104/170 (61%), Gaps = 8/170 (4%)
Query: 46 YEEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISA-REN 104
Y V F+LLCH +VG++IGK G +++T Q TGA I+I D PDS +R++++SA
Sbjct: 21 YTTHVTFRLLCHASRVGAIIGKSGVLIKTLQEATGAKIRIEDAPPDSPDRVILVSAPAAA 80
Query: 105 SEMRHSPAQDAVMRVHSRIAEI-----GFEPGQAVVA-RLLVHSQQIGCLLGRGGHIVSE 158
S+ S AQ A+++V R+ ++ G E G VV+ RLL + Q+G ++G+ G +V +
Sbjct: 81 SDGEVSTAQVALLKVFDRVLDVAAETAGTEVGDRVVSCRLLADTSQVGAVIGKAGKVVEK 140
Query: 159 MRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRE 208
+R TG IRV + P C +P DEIV+V G SV+ AL ++ L++
Sbjct: 141 IRMDTGCKIRVL-NEGLPACTAPSDEIVEVEGQLTSVKKALVAVSGCLQD 189
Score = 101 bits (252), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 53/122 (43%), Positives = 80/122 (65%), Gaps = 3/122 (2%)
Query: 303 TFDRPPSPRSWTPQGVGGGDPRGFD-ASSGFTPRNRPVE--SGNHAAILTSTTIEVVIPQ 359
+ +R P PQ V G + R + S G T + +E SG+ AI+T+TT+++ +P
Sbjct: 468 SLNRHSLPGLQAPQTVAGINSRVTNGVSRGLTSQKGGLELVSGSKTAIVTNTTVQIAVPD 527
Query: 360 LYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATEGVVMVSGTSDQMRAAQSLIHAFIL 419
+ VYGEN SNL+ +RQISGA V+V++P+PG ++ +++SGT D+ RAAQSL+ AFIL
Sbjct: 528 DVIGSVYGENGSNLARLRQISGAKVIVHEPRPGTSDRTIIISGTPDETRAAQSLLQAFIL 587
Query: 420 CG 421
G
Sbjct: 588 AG 589
>gi|224095794|ref|XP_002310483.1| predicted protein [Populus trichocarpa]
gi|222853386|gb|EEE90933.1| predicted protein [Populus trichocarpa]
Length = 747
Score = 167 bits (424), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 90/217 (41%), Positives = 136/217 (62%), Gaps = 15/217 (6%)
Query: 20 YAPGYHSRGYSSGPGHETVGGRNRMFYEEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNET 79
YA G H S E V + +++VVF++LC+ D+VG +IGKGG+IV QNET
Sbjct: 287 YASGTHLFSLES----ERVSTLDTSTPQQQVVFRILCNNDRVGGVIGKGGNIVTALQNET 342
Query: 80 GASIKIADILPDSEERIVVISARENSEMRHSPAQDAVMRVHSRIA----EIGFEPGQA-- 133
GA+I I + +ER++ ++A EN E R+S AQ V+ V SR+ E G +PG +
Sbjct: 343 GATISIGPKVAGCDERLITVTASENPESRYSAAQKTVVLVFSRVVESVIEKGLDPGSSEG 402
Query: 134 --VVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQA-PRCGSPHDEIVQVIG 190
V RL+V Q+GCLLG+GG I+SEMR+AT SIR+ +DQ P+C +D +V+++G
Sbjct: 403 SPVSVRLVVSPNQVGCLLGKGGTIISEMRKATSTSIRIIGRDQGNPKCVPENDHVVEILG 462
Query: 191 NYHSVQDALFHITSRLRETIFP--MKRPGPNNGHSYL 225
++ +V+D+++HIT RLR+ +F + PG + S L
Sbjct: 463 DFLNVKDSIYHITGRLRDNLFSSILGTPGARSSSSVL 499
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 62/164 (37%), Positives = 92/164 (56%), Gaps = 21/164 (12%)
Query: 262 MGPSQPFDHQAAFSHGMDPMVPPNSDRIPFPYGSERPGHGPTFDRPPSPRSWTPQGVGGG 321
+G S + Q + MD + G + D PSPR W Q + G
Sbjct: 599 VGISHNLNRQTVITQSMDHL-----------------GFSRSLDHSPSPRLWGSQTIPGV 641
Query: 322 DPRGFDASSGFTPRNRP----VESGNHAAILTSTTIEVVIPQLYMAHVYGENNSNLSHIR 377
+PRG SG P + + SG +A +T+TT+E+VIP+ VYGEN SNL+ +R
Sbjct: 642 NPRGISDLSGGLPSFKAGLDDLVSGGKSAFVTNTTVEIVIPEHTFGSVYGENGSNLARLR 701
Query: 378 QISGANVVVNDPKPGATEGVVMVSGTSDQMRAAQSLIHAFILCG 421
Q SGA V+V++P+ G ++ ++++SGT D+ +AAQSL+HAFIL G
Sbjct: 702 QFSGAKVIVHEPRLGTSDRIIVISGTPDETQAAQSLLHAFILTG 745
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 111/220 (50%), Gaps = 21/220 (9%)
Query: 9 PPAAEPFHQRGYAPG---YHSRGYSSGPG---HETVGGRNRMFYEEEVVFKLLCHLDKVG 62
PPA P + P + GYS+ H + V+F+LLCH ++G
Sbjct: 11 PPAKRPVYYSTILPDPNPNSTNGYSANKRSKPHPSTSAAPSPVPSGHVLFRLLCHDSRIG 70
Query: 63 SLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISAREN----------SEMRHSPA 112
+IGKGG+I++ Q +TGA I+I D +S +R++ I S + S
Sbjct: 71 GIIGKGGNIIKGLQQQTGAKIRIEDAPLESPDRVITIVGSVTQSSVVFSGIGSAIEVSKG 130
Query: 113 QDAVMRVHSRIAEIGFE----PGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIR 168
Q+A++RV RI E+ E G V RLL +G ++G+GG V ++R+ G ++
Sbjct: 131 QEALVRVFERILEVAAESDSVAGGLVSCRLLAEISSVGAVIGKGGKTVEKIRKDCGCKVK 190
Query: 169 VFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRE 208
V D+ P C S ++E++++ G+ +V+ L ++ RL++
Sbjct: 191 VL-IDKLPACASSNEEMIEIEGDVSAVKKGLVAVSHRLQD 229
>gi|224135123|ref|XP_002321989.1| predicted protein [Populus trichocarpa]
gi|222868985|gb|EEF06116.1| predicted protein [Populus trichocarpa]
Length = 685
Score = 167 bits (423), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 126/426 (29%), Positives = 191/426 (44%), Gaps = 78/426 (18%)
Query: 15 FHQRGYAPGYHSRGYSS-GPGHETVGGRN------RMFYEEEVVFKLLCHLDKVGSLIGK 67
F R P Y + YSS PG G + + FY E++VF++LC +DKV ++G+
Sbjct: 310 FGSRLSGPNYRNNNYSSRAPGFPVDAGADPNADSAQPFYVEDLVFRILCPIDKVNRVVGE 369
Query: 68 GGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMRHSPAQDAVMRVHSRIAEIG 127
+V QNE G +K+AD + S+E+I+ I + E + PAQ+A++ + +RI ++
Sbjct: 370 SDGLVDLLQNEIGVDVKVADPVSGSDEQIITICSEEGPDDELFPAQEALLHIQTRIVDLV 429
Query: 128 FEPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAPRCGSPHDEIVQ 187
+ + RLLV S +IGCL GR G + SEM TGA+I + PK+ P S DE+VQ
Sbjct: 430 ADKDNIITTRLLVPSSEIGCLEGRDGSL-SEMESLTGATIEILPKEMLPTYLSGTDELVQ 488
Query: 188 VIGNYHSVQDALFHITSRLRETIFP----------MKRPGPNNGHSYLPPFPEMPPPPFR 237
+ G + +DAL +TSRLR ++ + PGP L P P R
Sbjct: 489 IQGEVKAARDALVEVTSRLRSYLYKDVFQKDLPPTVSAPGPAGTAGGLQAASSNNPTPAR 548
Query: 238 PRHN----PASPGSYPSPVGPFHSMDRGMGPSQPFDHQAAFSHGMDPMVPPNSDRIPFPY 293
H+ PA+ + S P S D G S Q H D + PP +RIP
Sbjct: 549 EGHSGGDPPATYQNVQSASTPQPSKD-ARGSSAETVKQNESEHRED-LPPPTMNRIPVTL 606
Query: 294 GSERPGHGPTFDRPPSPRSWTPQGVGGGDPRGFDASSGFTPRNRPVESGNHAAILTSTTI 353
+ +IL
Sbjct: 607 VTR-------------------------------------------------SILEVVIP 617
Query: 354 EVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATEGVVMVSGTSDQMRAAQSL 413
E +P+L ++ + L+ I ++SGANV + + +P TE ++ +SGT +Q AQSL
Sbjct: 618 EPAVPKLIT-----KSKNKLAQISELSGANVTLVEDRPDVTEKIIQISGTPEQAERAQSL 672
Query: 414 IHAFIL 419
+ FIL
Sbjct: 673 LQGFIL 678
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 76/183 (41%), Positives = 109/183 (59%), Gaps = 25/183 (13%)
Query: 52 FKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISA--RENSEMR- 108
+++LCH K G +IGK GSI+++ + TGA I + +++P EERI+ IS R + E R
Sbjct: 88 YRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTRRRDPEGRM 147
Query: 109 --HSPAQDAVMRVHSRIAEI------------GFEP-------GQAVVARLLVHSQQIGC 147
SPAQ+A+ +H RI E GFE G V RL+V +GC
Sbjct: 148 PSFSPAQEALFLIHDRILENDLQYGVVSSGAGGFEEDEYVGRGGNRVATRLVVSRMHVGC 207
Query: 148 LLGRGGHIVSEMRRATGASIRVFPKDQA-PRCGSPHDEIVQVIGNYHSVQDALFHITSRL 206
LLG+GG I+ +MR T IR+ P+D PRC S +EIVQVIG+ ++V++A+ I+SRL
Sbjct: 208 LLGKGGKIIEQMRMETKTQIRILPRDHTLPRCVSVSEEIVQVIGDVNAVKNAVAIISSRL 267
Query: 207 RET 209
RE+
Sbjct: 268 RES 270
>gi|326490983|dbj|BAK05591.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 688
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 110/376 (29%), Positives = 182/376 (48%), Gaps = 61/376 (16%)
Query: 48 EEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEM 107
+E++F++LC DK SL+G I+ Q E G +++ D++ S+ER ++I++RE +
Sbjct: 361 DEIIFRILCPNDKAISLVGSRDGIIDMLQAEVGVDVRLTDLIAGSDERTLIITSREGPDH 420
Query: 108 RHSPAQDAVMRVHSRIAEIGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASI 167
PAQ+A++ + + I ++G + + RLLV S +I C GR G + S+++R T A++
Sbjct: 421 ELFPAQEALLHIQTFIVDLGPDKDNIITTRLLVPSSEIACFEGRDGSL-SDIQRQTSANV 479
Query: 168 RVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKRPGPNNGHSYLPP 227
++ P+++ P C DE++Q++G + ++AL +T++LR SY+
Sbjct: 480 QILPREELPSCALESDELIQIVGEIRAARNALMQVTTKLR---------------SYI-- 522
Query: 228 FPEMPPPPFR---PRHNPASPGSYPSPVGPFHSMDRGMGPSQPFDHQAAFSHGMDPMVPP 284
+ EMP P H SP SP G + D M P QA
Sbjct: 523 YREMPAPIQIGGINVHGSISPAK-GSPRGLYAGNDLPM----PIYQQA------------ 565
Query: 285 NSDRIPFPYGSERPGHGPTFDRPPSPRSWTPQGVGGGDPRGFDASSGFTPRNRPVESGNH 344
P SW + G F+ S R + +
Sbjct: 566 ----------------------PQMATSWHSKDSGLSASGSFEQGSSINDDMRQSNTKRY 603
Query: 345 AA-ILTSTTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATEGVVMVSGT 403
A ++T +T+EVVIPQ +A + S L+ I ++SGA+V + + +PG TE VV +SGT
Sbjct: 604 AVPLVTRSTLEVVIPQSAVASLSMRAGSKLAQISEMSGASVTLAEERPGVTEKVVRISGT 663
Query: 404 SDQMRAAQSLIHAFIL 419
+Q AQSL+ FIL
Sbjct: 664 PEQADKAQSLLQGFIL 679
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/181 (33%), Positives = 94/181 (51%), Gaps = 25/181 (13%)
Query: 52 FKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMR--- 108
F++LC K G S + Q+++GA I I P R++ + E
Sbjct: 111 FRILCPESKA---YGFPASFINNAQDDSGAIITIHPPFPGDPVRVIETADGTLREADGRP 167
Query: 109 --HSPAQDAVMRVHSRIAEI----GFEPGQ------------AVVARLLVHSQQIGCLLG 150
SPAQ+A++ VH RI E G E G+ V RL+V Q +GCLLG
Sbjct: 168 PMFSPAQEALLMVHRRILETQPDDGDEDGEYGPRGKDARDRGKVTTRLIVPRQHVGCLLG 227
Query: 151 RGGHIVSEMRRATGASIRVFPKDQ-APRCGSPHDEIVQVIGNYHSVQDALFHITSRLRET 209
+GG I+ +MR T IR+ P++Q PRC S +++VQV+G ++V+ A+ I+ RL+E+
Sbjct: 228 KGGKIIEQMRSETKTHIRILPREQNMPRCLSLSEKVVQVVGEGNNVKKAVAIISDRLKES 287
Query: 210 I 210
+
Sbjct: 288 L 288
>gi|356525090|ref|XP_003531160.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine
max]
Length = 625
Score = 158 bits (400), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 111/378 (29%), Positives = 195/378 (51%), Gaps = 65/378 (17%)
Query: 48 EEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEM 107
EE++ ++LC DK+G +IGKGGS +++ + +GA I++ D + +E +++I+ E+
Sbjct: 305 EELIIRMLCPSDKIGRVIGKGGSTIKSMRQASGAHIEVDDSKANFDECLIIITTTESPSD 364
Query: 108 RHSPAQDAVMRVHSRIAEIGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASI 167
S A +AV+ + +I + E V RLLV S+ IGC++G+ G I++E+R+ T A +
Sbjct: 365 LKSMAVEAVLLMQGKIND---EDDTTVSIRLLVPSKVIGCIIGKSGSIINEIRKRTKADV 421
Query: 168 RVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKRPGPNNGHSYLPP 227
R+ D+ P+C +DE+V+V G+ V+DAL I RLR+ + + G
Sbjct: 422 RISKGDK-PKCADANDELVEVGGSVDCVRDALIQIILRLRDDVLRERDTG---------- 470
Query: 228 FPEMPPPPFRPRHNPA--SPGSYPSPVG-PFHSMDRGMGPSQP---FDHQAAFSHGMDPM 281
HNP+ + YP G SM + P +DH+A G+ M
Sbjct: 471 ------------HNPSIGAESLYPGSAGLSLPSMMHSVPPVAAPMVYDHRAESGAGLG-M 517
Query: 282 VPPNSDRIPFPYGSERPGHGPTFDRPPSPRSWTPQGVGGGDPRGFDASSGFTPRNRPVES 341
+ P+S PYG G+G P G G+ + S + +
Sbjct: 518 LSPSS-----PYG----GYGSL-----------PMG-----DNGYGSMSSYATKL----- 547
Query: 342 GNHAAILTSTTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATEGVVMVS 401
+ + +T++++IP + V G+ +N+++IR+ISGA++ ++D K + + ++S
Sbjct: 548 --YGGLPPPSTLDMLIPANAVGKVLGKGGANIANIRKISGASIEISDNKSARGDRIALIS 605
Query: 402 GTSDQMRAAQSLIHAFIL 419
GT +Q RAA++LI AFI+
Sbjct: 606 GTPEQKRAAENLIQAFIM 623
Score = 107 bits (268), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 107/429 (24%), Positives = 176/429 (41%), Gaps = 94/429 (21%)
Query: 24 YHS-RGYSSGPGHET--VGGRNRMFYEEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETG 80
YHS R + H+ + R+ +E +V+++LC + +GS+IGK G ++ + + ET
Sbjct: 8 YHSQRDHDGDRKHQKRRMTDRDDRGNDELIVYRILCPDEVIGSVIGKNGKVINSIRQETR 67
Query: 81 ASIKIADILPDSEERIVVI----SARENSEMRH--------SPAQDAVMRVHSRIAEIGF 128
A +K+ D P S++R++ I +E+ E+ AQDA+++VH IA
Sbjct: 68 AKVKVVDPFPGSKDRVITIYCYVKEKEDVEIDDEFAGKEPLCAAQDALLKVHVAIANSIA 127
Query: 129 EPGQAVVAR-------LLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAP---RC 178
G + R +LV S Q ++G+ G + ++R T A+I+V KD A C
Sbjct: 128 AIGDSEKKRKDRDECQILVPSSQSANIIGKAGATIKKLRSKTRANIKVTAKDAADPTHSC 187
Query: 179 GSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKRPGPNNGHSYLPPFPEMPPPPFRP 238
D V + G +V+ ALF ++S M + GP S PE PP P
Sbjct: 188 AMEFDNFVVITGESEAVKRALFAVSS-------IMYKFGPREDISLDTAVPEAPPSIIIP 240
Query: 239 RHNPASP--GSYPSPVGPFHSMDRGMGPSQPFDHQAAFSHGMDPMVPPNSDRIPFPYGSE 296
P P G YP+ DP+V P +
Sbjct: 241 SDVPVYPPGGLYPAS---------------------------DPIVTPRA---------- 263
Query: 297 RPGHGPTFDRPPSPRSWTPQGVGGG---DPRGF-DASSGF--TPRNRPVESGNHAAILTS 350
PQ +G D +G+ DA + + PV SG A+
Sbjct: 264 -----------------VPQIIGATNVPDLQGYADAGNSWPMYSSALPVVSGVGASRSEE 306
Query: 351 TTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATEGVVMVSGTSDQMRAA 410
I ++ P + V G+ S + +RQ SGA++ V+D K E +++++ T
Sbjct: 307 LIIRMLCPSDKIGRVIGKGGSTIKSMRQASGAHIEVDDSKANFDECLIIITTTESPSDLK 366
Query: 411 QSLIHAFIL 419
+ A +L
Sbjct: 367 SMAVEAVLL 375
>gi|308080276|ref|NP_001183239.1| hypothetical protein [Zea mays]
gi|238010240|gb|ACR36155.1| unknown [Zea mays]
gi|414884425|tpg|DAA60439.1| TPA: hypothetical protein ZEAMMB73_126154 [Zea mays]
Length = 647
Score = 157 bits (398), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 115/386 (29%), Positives = 182/386 (47%), Gaps = 34/386 (8%)
Query: 48 EEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEM 107
++V F+LL G LIGK G I++ + ETGA I + + +ER++ I A E+ +
Sbjct: 276 QQVSFRLLLPTYLAGGLIGKKGLIIKGIEVETGACIDVGAPVAGCKERVITICALESPDS 335
Query: 108 RHSPAQDAVMRVHSRIAEI------GFEPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRR 161
+ Q A++ + R+ E+ FE + R+LV Q GCL+G GG I+ EM
Sbjct: 336 EYHIVQSALLLIFDRMMEMETNTHSTFEKASQFLVRVLVLKNQFGCLVGLGGSIIKEMVN 395
Query: 162 ATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKRPGPNNG 221
TGA I++ + P C S + +VQ+ G ++++AL + +LR IF NN
Sbjct: 396 TTGARIQILDDTEIPACASTFELVVQITGELMNIRNALSLVFWKLRNHIFS-NETDYNNS 454
Query: 222 HSYLPPFPEMPPPPFRPRHNPASPGSYPSPVGPFHSMDRGMGPSQPFDHQAAFSHGMDPM 281
H E N S + S + +S+D G DH++ S+G+D +
Sbjct: 455 HISSSEIAE---------SNATSQANIYSTIQ--YSVDNG----HKVDHRSPLSYGVDSV 499
Query: 282 VPPNSDRIPFPYGSERP--GHGPTFDRPPS----PRSWTPQGVGGGDPRGFDASSGFTPR 335
SD ++P G+G + S P W G+ + SS
Sbjct: 500 EKSFSDLELSSSEIQKPDNGNGVRINNSDSGIQNPSDW--NGIVTNNLNDGIISS---DE 554
Query: 336 NRPVESGNHAAILTSTTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATE 395
N V HAAI T T E + + VYG+N SNL+ + ++SGA+++V +P E
Sbjct: 555 NNLVRGAEHAAI-TRITYETAVSGSILTLVYGDNGSNLAKLTEVSGADIIVYNPPSEGNE 613
Query: 396 GVVMVSGTSDQMRAAQSLIHAFILCG 421
+++VSG DQ ++AQ L+ IL G
Sbjct: 614 AMIVVSGPPDQAQSAQRLLVELILQG 639
>gi|302754958|ref|XP_002960903.1| hypothetical protein SELMODRAFT_73985 [Selaginella moellendorffii]
gi|300171842|gb|EFJ38442.1| hypothetical protein SELMODRAFT_73985 [Selaginella moellendorffii]
Length = 502
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 88/207 (42%), Positives = 125/207 (60%), Gaps = 5/207 (2%)
Query: 47 EEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSE 106
E E +LLC +K+GS+IGKGG I+R+ + ET A IKIAD + ++EER++ I++ E
Sbjct: 272 EGEFAVRLLCPNEKIGSVIGKGGMIIRSIREETCARIKIADAVANAEERVIHITSNEVLH 331
Query: 107 MRHSPAQDAVMRVHSRIAEIGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGAS 166
+ SPA +AV+++ SRI++ E A+ R LV S IGCLLG+ G I+++MRR T A+
Sbjct: 332 EQVSPALEAVLQLQSRISDPSAEKDGAMTTRFLVPSANIGCLLGKKGSIIADMRRNTRAN 391
Query: 167 IRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFP--MKRPGPNNGHSY 224
IRV K+ P+C DE+VQV+G+ +DA+ I +RLR IF MK N G
Sbjct: 392 IRVLSKEALPKCAHEDDELVQVVGDITVARDAVIEIITRLRANIFSEHMKNVSSNPGLGV 451
Query: 225 LPPFPEMPPPPFRPRHNPASPGSYPSP 251
P + PRH P SPG + P
Sbjct: 452 QGSVP--VSSTYEPRHEP-SPGMFSLP 475
Score = 134 bits (338), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 87/228 (38%), Positives = 129/228 (56%), Gaps = 40/228 (17%)
Query: 48 EEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEM 107
++VV+++LC K+GS+IGKGGSI+++ +NETGA IK+AD +P S+ER++ IS RE E
Sbjct: 44 DDVVYRILCPGAKIGSVIGKGGSIIKSLRNETGAKIKVADGIPGSDERVIFISPRERREG 103
Query: 108 R------------------HSP---AQDAVMRVHSRIA-----EIGFEPGQAVVARLLVH 141
+ +P +Q+A+ +V +RI + + + V ARLLV
Sbjct: 104 KPRGGSKEMDKDKEQNGEESTPLPASQEALFKVFARIVEGEEFDEDEDSSRNVTARLLVP 163
Query: 142 SQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFH 201
S QIGCLLG+ G I+ +MR +GA IRV P++Q P+C DE+ + G V+ AL
Sbjct: 164 SNQIGCLLGKAGKIIEQMRVESGAQIRVLPREQLPKCAYHTDEL--LTGELALVKKALTT 221
Query: 202 ITSRLRETIFPMKRPGPNNGHSYLPPFPE--------MPPPPFRPRHN 241
I++RL + P + P GH L PF E +PP F P+ N
Sbjct: 222 ISTRLYDN--PPRDKPPQAGH--LGPFQESTILPGTLLPPGAFFPQGN 265
>gi|302767378|ref|XP_002967109.1| hypothetical protein SELMODRAFT_87147 [Selaginella moellendorffii]
gi|300165100|gb|EFJ31708.1| hypothetical protein SELMODRAFT_87147 [Selaginella moellendorffii]
Length = 506
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 88/207 (42%), Positives = 125/207 (60%), Gaps = 5/207 (2%)
Query: 47 EEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSE 106
E E +LLC +K+GS+IGKGG I+R+ + ET A IKIAD + ++EER++ I++ E
Sbjct: 276 EGEFAVRLLCPNEKIGSVIGKGGMIIRSIREETCARIKIADAVANAEERVIHITSNEVLH 335
Query: 107 MRHSPAQDAVMRVHSRIAEIGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGAS 166
+ SPA +AV+++ SRI++ E A+ R LV S IGCLLG+ G I+++MRR T A+
Sbjct: 336 EQVSPALEAVLQLQSRISDPSAEKDGAMTTRFLVPSANIGCLLGKKGSIIADMRRNTRAN 395
Query: 167 IRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFP--MKRPGPNNGHSY 224
IRV K+ P+C DE+VQV+G+ +DA+ I +RLR IF MK N G
Sbjct: 396 IRVLSKEALPKCAHEDDELVQVVGDITVARDAVIEIITRLRANIFSEHMKNVSSNPGLGV 455
Query: 225 LPPFPEMPPPPFRPRHNPASPGSYPSP 251
P + PRH P SPG + P
Sbjct: 456 QGSVP--VSSTYEPRHEP-SPGMFSLP 479
Score = 140 bits (354), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 89/230 (38%), Positives = 130/230 (56%), Gaps = 40/230 (17%)
Query: 48 EEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISA------ 101
++VV+++LC K+GS+IGKGGSI+++ +NETGA IK+AD +P S+ER++ ISA
Sbjct: 44 DDVVYRILCPGAKIGSVIGKGGSIIKSLRNETGAKIKVADGIPGSDERVIFISASPRERR 103
Query: 102 --------------RENSEMRHSP---AQDAVMRVHSRIAEIGFE-----PGQAVVARLL 139
+E + +P +Q+A+ +V +RI E + V ARLL
Sbjct: 104 EGKPRGGSKEMDKDKEQNGEESTPLPASQEALFKVFARIVEGEEFDEDEDSSRNVTARLL 163
Query: 140 VHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDAL 199
V S QIGCLLG+ G I+ +MR +GA IRV P++Q P+C DE+VQ+ G V+ AL
Sbjct: 164 VPSNQIGCLLGKAGKIIEQMRVESGAQIRVLPREQLPKCAYHTDELVQLTGELALVKKAL 223
Query: 200 FHITSRLRETIFPMKRPGPNNGHSYLPPFPE--------MPPPPFRPRHN 241
I++RL + P + P GH L PF E +PP F P+ N
Sbjct: 224 TTISTRLYDN--PPRDKPPQAGH--LGPFQESTILPGTLLPPGAFFPQGN 269
>gi|293332893|ref|NP_001169297.1| uncharacterized protein LOC100383161 [Zea mays]
gi|224028485|gb|ACN33318.1| unknown [Zea mays]
Length = 664
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 103/376 (27%), Positives = 176/376 (46%), Gaps = 61/376 (16%)
Query: 48 EEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEM 107
E+++F++LC DK SL+ I+ Q + G ++++DI DS+ER+++I++RE +
Sbjct: 337 EDIIFRILCPNDKADSLVATRDGILEMLQTDVGVDVRLSDITSDSDERVLIITSREGPDH 396
Query: 108 RHSPAQDAVMRVHSRIAEIGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASI 167
PAQ+AV+ + + I ++G + + RLLV + +I C GR G + S+++R T A++
Sbjct: 397 ELFPAQEAVLHIQTHIVDLGPDMDNIITTRLLVPASEIACFDGREGSL-SDIQRQTSANV 455
Query: 168 RVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKRPGPNNGHSYLPP 227
++ P++ P C DE++Q++G + ++AL +T++LR S+L
Sbjct: 456 QILPREDLPSCALESDELIQIVGEIKAARNALIQVTTKLR---------------SFL-- 498
Query: 228 FPEMPPPPFRPR---HNPASPGSYPSPVGPFHSMDRGMGPSQPFDHQAAFSHGMDPMVPP 284
+ EMP P H SP + SP GP+ D MG A H D
Sbjct: 499 YREMPDPIQVGNINLHGAISPVA-GSPRGPYQGNDIPMGAYHQASQLATSWHSKDS---- 553
Query: 285 NSDRIPFPYGSERPGHGPTFDRPPSPRSWTPQGVGGGDPRGFDASSGFTPRNRPVESGNH 344
GG F+ S R +
Sbjct: 554 ----------------------------------GGSASGSFEQGSNINDDIRQSATKRF 579
Query: 345 AA-ILTSTTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATEGVVMVSGT 403
A ++T +T+E+VIP +A + S L+ I +ISGA V + + + + VV +SGT
Sbjct: 580 AVPLVTRSTLEIVIPNSAVASLTMRAGSKLAQISEISGAAVTLAEDRSDILQKVVRISGT 639
Query: 404 SDQMRAAQSLIHAFIL 419
+Q A++L+ FIL
Sbjct: 640 PEQASKAENLLQGFIL 655
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/118 (38%), Positives = 66/118 (55%), Gaps = 17/118 (14%)
Query: 110 SPAQDAVMRVHSRIAEIGFEPGQ----------------AVVARLLVHSQQIGCLLGRGG 153
SPAQ+A++ VH RI E + G RL+V Q +GCLLG+GG
Sbjct: 147 SPAQEALLMVHRRILETDADDGDEDGEYGPRGKDARDRGKTTTRLIVPKQHVGCLLGKGG 206
Query: 154 HIVSEMRRATGASIRVFPKDQ-APRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETI 210
I+ +MR T IR+ + Q PRC S +E+VQV+G+ + V+ A+ IT RL+E++
Sbjct: 207 KIIEQMRMETKTHIRILSRGQHTPRCVSSSEEVVQVVGDGNCVKKAVAIITDRLKESL 264
>gi|297791069|ref|XP_002863419.1| KH domain-containing protein [Arabidopsis lyrata subsp. lyrata]
gi|297309254|gb|EFH39678.1| KH domain-containing protein [Arabidopsis lyrata subsp. lyrata]
Length = 643
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 110/384 (28%), Positives = 183/384 (47%), Gaps = 68/384 (17%)
Query: 48 EEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPD-SEERIVVISARENSE 106
E++V K++C K+G +IGKGGS ++ + +G+ I++ D + ++ ++ ++A E+ +
Sbjct: 314 EKLVIKVICSSSKIGRVIGKGGSTIKGIRQASGSHIEVNDSRANHDDDCVITVTATESPD 373
Query: 107 MRHSPAQDAVMRVHSRIAEIGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGAS 166
S A +AV+ + +I + E + V +LLV S+ IGC++G+ G I+SE+R+ T A+
Sbjct: 374 DLKSMAVEAVLLLQEKIND---EDEEKVKMQLLVPSKVIGCIIGKSGSIISEIRKRTKAN 430
Query: 167 IRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKRPGPNNGHSYLP 226
I + + P+C P+DE+V++ G V+DAL I RLR+ + + G N
Sbjct: 431 IHISKGNNKPKCADPNDELVEISGEVSDVRDALIQIVLRLRDDVLRDREIGSRN------ 484
Query: 227 PFPEMPPPPFRPRHNP-----------ASPGSYPSPVGPFHSMDRGMGPSQPFDHQAAFS 275
PP R +N A P S+ S V S+D FD +
Sbjct: 485 ------QPPARSENNNFFSSGSSNTGLALPSSFMSSVPQVASVD--------FDRRPETG 530
Query: 276 HGMDPMVPPNSDRIPFPYGSERPGHGPTFDRPPSPRSWTPQGVGGGDPRGFDASSGFTPR 335
M M+P + + YGS P + +S + GG P+
Sbjct: 531 SSM-SMLPSSGGL--YGYGS-----FPVGNNSYGSKSSYSSNLYGGLPQ----------- 571
Query: 336 NRPVESGNHAAILTSTTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATE 395
STT+EV IP + V G NL +IR+ISGA + ++D K
Sbjct: 572 --------------STTMEVRIPANAVGKVMGRGGGNLDNIRRISGAMIEISDSKNSHGG 617
Query: 396 GVVMVSGTSDQMRAAQSLIHAFIL 419
+ ++SGT +Q R A++L AFI+
Sbjct: 618 RIALISGTPEQKRTAENLFQAFIM 641
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 95/382 (24%), Positives = 146/382 (38%), Gaps = 83/382 (21%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISAR------- 102
VV+++LC +GS+IGK G ++ + ET A IK+ D P ER++ I
Sbjct: 43 VVYRILCPSGVMGSVIGKSGKVINLIRQETRARIKVVDPFPGCSERVITIFCSVTEKKDI 102
Query: 103 ---ENSEMRHS----PAQDAVMRVHSRI-AEIGFEPGQAVV-------ARLLVHSQQIGC 147
E+SE+ +S AQDA+++VH I A + + RLLV S Q
Sbjct: 103 IDIEHSELNYSIPLCSAQDALLKVHDAIVASLATAAENTKIDRDDIRECRLLVPSSQCSN 162
Query: 148 LLGRGGHIVSEMRRATGASIRVFPKDQAP---RCGSPHDEIVQVIGNYHSVQDALFHITS 204
++G+ G I+ ++R T A+++V KD + C D IV + G SV+ ALF +++
Sbjct: 163 VIGKSGSIIKKIRSRTRANVKVVSKDVSDPSHTCAMDFDNIVLISGESESVKKALFAVSA 222
Query: 205 RLRETIFPMKRPGPNNGHSYLPPFPEMPPPPFRPRHNPASP--GSYPSPVGPFHSMDRGM 262
M + P E+P P P G YP
Sbjct: 223 -------IMYKVSPREQIPLDTTVQEVPASIIIPSDLSIYPQGGLYP------------- 262
Query: 263 GPSQPFDHQAAFSHGMDPMVPPNSDRIPFPYGSERPGHGPTFDRPPSPRSWTPQGVGGGD 322
+ F HG + V +P YG P F P G GG
Sbjct: 263 ------NQDPIFQHGAN--VSSFIGTLPQGYGESAANPMPVFSASALP---VVHGFGGSS 311
Query: 323 PRGFDASSGFTPRNRPVESGNHAAILTSTTIEVVIPQLYMAHVYGENNSNLSHIRQISGA 382
I+V+ + V G+ S + IRQ SG+
Sbjct: 312 KS------------------------EKLVIKVICSSSKIGRVIGKGGSTIKGIRQASGS 347
Query: 383 NVVVNDPKPG-ATEGVVMVSGT 403
++ VND + + V+ V+ T
Sbjct: 348 HIEVNDSRANHDDDCVITVTAT 369
>gi|357117002|ref|XP_003560265.1| PREDICTED: uncharacterized protein LOC100827626 [Brachypodium
distachyon]
Length = 656
Score = 144 bits (363), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 113/395 (28%), Positives = 188/395 (47%), Gaps = 24/395 (6%)
Query: 36 ETVGGRNRMFYEEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEER 95
+ V G +++ F+LLCH++ G LIGK G I++ F+ ETGASI + + ER
Sbjct: 267 QDVAGNVETENLQQISFRLLCHVNLAGGLIGKKGMIIKGFETETGASIDVGNPFSGCMER 326
Query: 96 IVVISARENSEMRHSPAQDAVMRVHSRIAEI--GFEPGQ-AVVARLLVHSQQIGCLLGRG 152
++ ISA E S +HS Q A++ + R+ E+ G+ AR+LV Q L+G G
Sbjct: 327 VITISALE-SPGKHSKVQSAILCIFDRMEEVERNLMFGKPECSARVLVPKSQFSSLVGLG 385
Query: 153 GHIVSEMRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFP 212
G I+ EM ++TGA I + + P C S + ++Q+ GN +V+DALF ++ +LR F
Sbjct: 386 GAIIKEMVKSTGARIEILDEMDVPACASNCERVLQITGNLVNVRDALFVVSEKLRNHAFS 445
Query: 213 MKRPGPNNGHSYLPPFPEMPPPPFRPRHNPASPGSYPSPVGPFHSMDRGMGPSQPFDHQ- 271
K ++G++ E N +S +Y + P + + + ++
Sbjct: 446 SKCTKHDDGNATASDIIESTA---SMTVNISSTDNYSTDNFPRTDHEPSVIQMESLENSF 502
Query: 272 AAFSHGMDPMVPPNSDRIPFPYGSERPGHGPTFD---RPPSPRSWTPQGV----GGGDPR 324
+AF G P S + +E G + +PP+ GV G D R
Sbjct: 503 SAFHLG-----SPGSLELESLANAEDTGIINLKNEGQKPPNRSCAVITGVQKPADGDDDR 557
Query: 325 GFDASSGFT-PRNRPVESGNHAAILTSTTIEVVIPQLYMAHVYGENNSNLSHIRQISGAN 383
++ G T P + ++T T E+ +Y + +NL+ +RQI+GA+
Sbjct: 558 ISKSNHGITSPDENQLMRVMKDPVVTRMTYEIAACGGIFCLLYRDKGNNLAQLRQITGAD 617
Query: 384 VVVNDPKPGATEGVVMVSGTSDQMRAAQSLIHAFI 418
+ V DP P ++ +++SGT DQ AQ + A I
Sbjct: 618 ISVYDPPPETSDCSIVISGTPDQ---AQLALAALI 649
>gi|357463999|ref|XP_003602281.1| Poly(rC)-binding protein [Medicago truncatula]
gi|355491329|gb|AES72532.1| Poly(rC)-binding protein [Medicago truncatula]
Length = 646
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 99/397 (24%), Positives = 187/397 (47%), Gaps = 62/397 (15%)
Query: 23 GYHSRGYSSGPGHETVGGRNRMFYEEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGAS 82
+ S YS G V + FYE+ ++F++LC +D+V ++G+ G I+ Q+ G
Sbjct: 305 NHASISYSMDQGAAPVAHDEQPFYED-LIFRILCPVDRVDRIVGESGGILELLQDRVGVD 363
Query: 83 IKIADILPDSEERIVVISARENSEMRHSPAQDAVMRVHSRIAEIGFEPGQAVVARLLVHS 142
++I+D + S+E++V+I++ E PAQ+A++ + + I ++ + RL+V S
Sbjct: 364 VQISDRVGGSDEQMVIITSEEGPNDTMFPAQEALLHIQTHIVDLS---DSIITTRLIVPS 420
Query: 143 QQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHI 202
I CL G+ + SE+ R+TGAS+++ P+++ P C + DE+VQ++G + ++ + +
Sbjct: 421 SDIECLDGKNASL-SEIERSTGASVQILPREELPPCIANTDELVQIVGEIEAARNVILDV 479
Query: 203 TSRLRETIFPMKRPGPNNGHSYLPPFPEMPPPPFRPRHNPASPGSYPSPVGPFHSMDRGM 262
T++LR + + + + +PP P +S S + V + ++ M
Sbjct: 480 TAKLRSYV-----------YRDILQWDTVPPSAPLPSVEASSSNSMAT-VAETATANQNM 527
Query: 263 GPSQPFDHQAAFSHGMDPMVPPNSDRIPFPYGSERPGHGPTFDRPPSPRSWTPQGVGGGD 322
+ S+ G T G
Sbjct: 528 QS------------------------VAVALASKESGGS------------TEMGKQKES 551
Query: 323 PRGFDASSGFTPRNRPVESGNHAAILTSTTIEVVIPQLYMAHVYGENNSNLSHIRQISGA 382
R D +G NR V +++T + +EVVIP+ + + ++ S L+ I ++SGA
Sbjct: 552 DRRDDLPTGL---NRTV------SLVTRSILEVVIPEYAVPKLLAKSKSKLAQISELSGA 602
Query: 383 NVVVNDPKPGATEGVVMVSGTSDQMRAAQSLIHAFIL 419
NV + + +P E ++ +SGT +Q QSL+ FIL
Sbjct: 603 NVKLVEDRPDEKEKIIQISGTPEQAERGQSLLQGFIL 639
Score = 121 bits (303), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 71/177 (40%), Positives = 106/177 (59%), Gaps = 19/177 (10%)
Query: 52 FKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISA--RENSEMR- 108
++LLCH + G +IGK GSI+++ + TGA I + + + EERI+ IS R + + R
Sbjct: 65 YRLLCHDLRAGGVIGKSGSIIKSIRQHTGAWINVHEPVAGDEERIIEISDTRRRDPDGRM 124
Query: 109 --HSPAQDAVMRVHSRIAEI--GFEPGQA-----------VVARLLVHSQQIGCLLGRGG 153
SPAQ+A++ +H R+ E GFE + V +RL+V +G LLG+GG
Sbjct: 125 PQFSPAQEALLLIHERLLENDPGFEDEEDYGGGRGGGGKRVSSRLVVSKMHVGSLLGKGG 184
Query: 154 HIVSEMRRATGASIRVFPKDQ-APRCGSPHDEIVQVIGNYHSVQDALFHITSRLRET 209
I+ +MR T IR+ P+D PRC S +EIVQV G+ H+V++A I+SRLRE+
Sbjct: 185 KIIEQMRIETKTQIRILPRDSYLPRCVSMSEEIVQVTGDIHNVKNAFLVISSRLRES 241
>gi|115475229|ref|NP_001061211.1| Os08g0200400 [Oryza sativa Japonica Group]
gi|38636959|dbj|BAD03220.1| putative KH domain protein [Oryza sativa Japonica Group]
gi|113623180|dbj|BAF23125.1| Os08g0200400 [Oryza sativa Japonica Group]
gi|215695475|dbj|BAG90642.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 441
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 110/372 (29%), Positives = 185/372 (49%), Gaps = 54/372 (14%)
Query: 49 EVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMR 108
E+V ++LC K+G +IGKGG +++ + E+GA I + D D EE I+ I++ E ++
Sbjct: 121 ELVLRVLCPAGKIGLVIGKGGVTIKSIRKESGARIDVDDSKNDREESIITITSNEATDDA 180
Query: 109 HSPAQDAVMRVHSRIAEIGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIR 168
S A +AV+ + S+I + + + RLLV + IGCL+G+GG IV++MR T A+I
Sbjct: 181 KSAAVEAVLLLQSKIND---DNEGKMNLRLLVPGKVIGCLIGKGGSIVNDMRSKTKAAIY 237
Query: 169 VFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKRPGPNNGHSYLPPF 228
+ K + PR S DE+V+V G +++DAL I RLR+ + R + +S
Sbjct: 238 I-SKGEKPRKASSSDELVEVFGEVENLRDALVQIVLRLRDDVL---RDSVDRQNS----- 288
Query: 229 PEMPPPPFRPRHNPASPGSYPSP-VGPFHSMDRGMGPSQPFDHQAAFSHGMDPMVPPNSD 287
E +P SYP P + P+ +G +DH+ G++ V P+S
Sbjct: 289 -EKDGKLTVATTDPLYASSYPLPALLPYRQQITPLG----YDHRGDIERGLE--VYPHSS 341
Query: 288 RIPFPYGSERPGHGPTFDRPPSPRSWTPQGVGGGDPRGFDASSGFTPRNRPVESGNHAAI 347
+ Y S + D + S+ +G GG P
Sbjct: 342 L--YGYSSLQ----AIDDGYSAVSSYASKGYGGRPPH----------------------- 372
Query: 348 LTSTTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATEGVVMVSGTSDQM 407
+E+ IP ++ V G++ +NL +I +ISGA++ + + K V +SGT++Q
Sbjct: 373 -----MEMTIPASGLSKVMGKHGTNLDNIIKISGAHIEIIESKSSRHGHVARISGTTEQK 427
Query: 408 RAAQSLIHAFIL 419
++A++LI AFI+
Sbjct: 428 QSAENLIKAFIM 439
>gi|356509231|ref|XP_003523354.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine
max]
Length = 644
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 69/186 (37%), Positives = 116/186 (62%), Gaps = 1/186 (0%)
Query: 26 SRGYSSGPGHETVGGRNRMFYEEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKI 85
S Y+ PG V + FY EE+VF++LC ++KV +IG+ IV QNE G +K+
Sbjct: 300 SLNYAMEPGAAPVVDDAQGFYGEELVFRILCPIEKVDRIIGESEGIVEFLQNEVGVDVKV 359
Query: 86 ADILPDSEERIVVISARENSEMRHSPAQDAVMRVHSRIAEIGFEPGQAVVARLLVHSQQI 145
D + S+E+I++I++ E + PAQ+A++ V +RI ++ + + RL+V S +I
Sbjct: 360 TDPVGGSDEQIIIITSEEGPDDELFPAQEALLHVQTRIVDLVLDKDNTITTRLVVPSSEI 419
Query: 146 GCLLGRGGHIVSEMRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSR 205
CL G+ + SE+RR TGA+I++ P+D+ P C + DE+VQ++G + +DA+ +TSR
Sbjct: 420 ECLDGKDVSL-SEIRRLTGANIQILPRDELPLCVAKTDELVQIVGEIKAARDAVVEVTSR 478
Query: 206 LRETIF 211
LR ++
Sbjct: 479 LRSYLY 484
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 91/266 (34%), Positives = 137/266 (51%), Gaps = 26/266 (9%)
Query: 52 FKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISA--RENSEMR- 108
+++LCH K G +IGK GSI+++ + TGA I + +++P EERI+ IS R + E R
Sbjct: 63 YRILCHDLKAGGVIGKSGSIIKSIRQHTGAWINVHELMPGDEERIIEISDTRRRDPEGRM 122
Query: 109 --HSPAQDAVMRVHSRIAEIGFEPGQA---------------VVARLLVHSQQIGCLLGR 151
SPAQ+A++ +H RI E G A + RL+V +GCLLG+
Sbjct: 123 PSFSPAQEALLLIHERILESDAAFGVAEEDEEYGGRGGGRDRIATRLVVSRMHVGCLLGK 182
Query: 152 GGHIVSEMRRATGASIRVFPKD-QAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETI 210
GG I+ +MR T IR+ P+D PRC S +EIVQV+GN ++V++AL I+SRLRE+
Sbjct: 183 GGKIIEQMRMETKTQIRILPRDHNLPRCVSMSEEIVQVVGNVNAVKNALVIISSRLRES- 241
Query: 211 FPMKRPGPNNGHSYLPPFPEMPPPPFRPRHNPASPGSYPSPVGPFHSMDRGMGPSQPFDH 270
+ +G + P P + P + GS S V RG + ++
Sbjct: 242 -QHRDRSHFHGRVHSPERFFSPDDDYVPH---VTSGSRRSSVDGASFGSRGSNTNSRNNN 297
Query: 271 QAAFSHGMDPMVPPNSDRIPFPYGSE 296
+ ++ M+P P D YG E
Sbjct: 298 HPSLNYAMEPGAAPVVDDAQGFYGEE 323
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 49/73 (67%)
Query: 347 ILTSTTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATEGVVMVSGTSDQ 406
++T +T+EVV+P+ + + ++ S L+ I ++SGANV + + +P T+ ++ +SGT +Q
Sbjct: 565 LVTRSTLEVVLPEYAVPKLVAKSKSKLAQISELSGANVTLVEDRPDVTQKIIQISGTPEQ 624
Query: 407 MRAAQSLIHAFIL 419
AQSL+ FIL
Sbjct: 625 AERAQSLLQGFIL 637
>gi|113205451|gb|AAW28569.2| KH domain containing protein, putative [Solanum demissum]
Length = 600
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 79/197 (40%), Positives = 119/197 (60%), Gaps = 5/197 (2%)
Query: 40 GRNRMFYEEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVI 99
GR+R +E +L+C + VG++IGKGG I++ + E+GASIK+ + ++ I+ +
Sbjct: 262 GRSRSSSVKEFAVRLVCPTENVGAVIGKGGGIIKQLRQESGASIKVDSAAAEGDDCIIFV 321
Query: 100 SARENSEMRHSPAQDAVMRVHSRIAE-IGFEPGQAVVA-RLLVHSQQIGCLLGRGGHIVS 157
SA+E E SP DA MR+ R +E E G A++ RLLV S ++GCL+G+GG I++
Sbjct: 322 SAKEAFE-DQSPTIDATMRLQPRSSEKTEKESGDAILTTRLLVPSSRVGCLIGKGGSIIN 380
Query: 158 EMRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMK--R 215
EMR +T ASIRV K+ P+ S DE+VQ+ G+ + +AL + RLR F M+
Sbjct: 381 EMRNSTRASIRVLSKENLPKVASEDDEMVQITGDANVAANALLQVLMRLRANTFEMEGSF 440
Query: 216 PGPNNGHSYLPPFPEMP 232
P + G SY+P MP
Sbjct: 441 PAFSPGLSYVPMSASMP 457
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 66/174 (37%), Positives = 100/174 (57%), Gaps = 13/174 (7%)
Query: 48 EEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVI-SARENSE 106
E+ VF+ LC K+GS+IG GG I + + ET + I+I++ +P EER+V I S E +
Sbjct: 41 EDTVFRYLCPTGKIGSIIGVGGDIAKQLRTETNSKIRISETIPGCEERVVTIYSGSEETN 100
Query: 107 MRH------SPAQDAVMRVHSRI------AEIGFEPGQAVVARLLVHSQQIGCLLGRGGH 154
+ SPAQDA+ RVH R+ + E Q + R+LV S QIGC++G+GG
Sbjct: 101 VSEDTGDLISPAQDALFRVHDRVLAEDLRMDEDLEDHQQITVRMLVPSDQIGCVIGKGGQ 160
Query: 155 IVSEMRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRE 208
++ +R TGA IRV + P C DE++Q+ G V+ AL+ + +RL +
Sbjct: 161 VIQNLRSETGAQIRVLSSEHLPPCALNSDELLQITGEGAVVKKALYQVAARLHD 214
>gi|53749469|gb|AAU90323.1| KH domain containing protein [Solanum demissum]
Length = 533
Score = 142 bits (357), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 78/197 (39%), Positives = 119/197 (60%), Gaps = 5/197 (2%)
Query: 40 GRNRMFYEEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVI 99
GR++ +E +L+C + VG++IGKGG I++ + E+GASIK+ + ++ I+ +
Sbjct: 262 GRSKSSSVKEFAVRLVCPTENVGAVIGKGGGIIKQLRQESGASIKVDSAAAEGDDCIIFV 321
Query: 100 SARENSEMRHSPAQDAVMRVHSRIAE-IGFEPGQAVVA-RLLVHSQQIGCLLGRGGHIVS 157
SA+E E SP DA MR+ R +E E G A++ RLLV S ++GCL+G+GG I++
Sbjct: 322 SAKEAFE-DQSPTIDATMRLQPRSSEKTEKESGDAILTTRLLVPSSRVGCLIGKGGSIIN 380
Query: 158 EMRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKR-- 215
EMR +T ASIRV K+ P+ S DE+VQ+ G+ + +AL + RLR F M+
Sbjct: 381 EMRNSTRASIRVLSKENLPKVASEDDEMVQITGDANVATNALLQVLMRLRANTFEMEGSF 440
Query: 216 PGPNNGHSYLPPFPEMP 232
P + G SY+P MP
Sbjct: 441 PAFSPGLSYVPMSASMP 457
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 66/174 (37%), Positives = 100/174 (57%), Gaps = 13/174 (7%)
Query: 48 EEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVI-SARENSE 106
E+ VF+ LC K+GS+IG GG I + + ET + I+I++ +P EER+V I S E +
Sbjct: 41 EDTVFRYLCPTGKIGSIIGVGGDIAKQLRTETNSKIRISETIPGCEERVVTIYSGSEETN 100
Query: 107 MRH------SPAQDAVMRVHSRI------AEIGFEPGQAVVARLLVHSQQIGCLLGRGGH 154
+ SPAQDA+ RVH R+ + E Q + R+LV S QIGC++G+GG
Sbjct: 101 VSEDTGDLISPAQDALFRVHDRVLAEDLRMDEDLEDHQQITVRMLVPSDQIGCVIGKGGQ 160
Query: 155 IVSEMRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRE 208
++ +R TGA IRV + P C DE++Q+ G V+ AL+ + +RL +
Sbjct: 161 VIQNLRSETGAQIRVLSSEHLPPCALNSDELLQITGEGAVVKKALYQVAARLHD 214
>gi|356496890|ref|XP_003517298.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine
max]
Length = 602
Score = 141 bits (355), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 81/192 (42%), Positives = 110/192 (57%), Gaps = 8/192 (4%)
Query: 29 YSSGPGHETVGGRNRMFYEEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADI 88
Y R+ E EVVF+LLC + GS+IGK G+IVR +++TGASI A
Sbjct: 261 YERTTNSNETSNRDSKGAEHEVVFRLLCSNNVAGSVIGKRGAIVRALESKTGASIIFAAP 320
Query: 89 LPDSEERIVVISARENSEMRHSPAQDAVMRVHSRIAE----IGFEPGQA----VVARLLV 140
L + ERIV ISA E+ E +SPAQDAV+ V +RI E GF + V ARLLV
Sbjct: 321 LSEHAERIVTISAVESLESCNSPAQDAVILVFARIIEDHIGKGFLQVSSMESPVTARLLV 380
Query: 141 HSQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALF 200
+ + C G G ++SE+R TGA I++ + P S D +VQ+ G Y VQ+AL+
Sbjct: 381 ATSTVNCFSGNEGQVISELREVTGADIQILHGESVPNGASDEDVVVQITGEYRCVQNALY 440
Query: 201 HITSRLRETIFP 212
ITSR+R+ + P
Sbjct: 441 KITSRIRDNLSP 452
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 61/178 (34%), Positives = 99/178 (55%), Gaps = 21/178 (11%)
Query: 49 EVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISAR------ 102
++ F+L+CH VG LIG GSIV + ETG I D L +E+R++++
Sbjct: 40 QIAFRLVCHASTVGGLIGSSGSIVSQLRRETGCKIHCEDSLSSAEDRVILVIGSLSPRKG 99
Query: 103 ----ENSEMRHSPAQDAVMRVHSRIAEIGFEPGQ--------AVVARLLVHSQQIGCLLG 150
+ E+ S AQ+AV+RV R+ ++ E G V ++LL H+ QIG ++G
Sbjct: 100 LLLGDGGEVEVSSAQEAVVRVFERVWDLEAEKGVNSNRAVNGEVFSKLLAHTSQIGAVVG 159
Query: 151 RGGHIVSEMRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRE 208
+GG ++ +R TGA IRVFP P+C + +E+VQ+ G +V+ AL ++ L++
Sbjct: 160 KGGKNITAIRNNTGAKIRVFP---PPQCATKDEELVQITGGILAVKKALISVSHCLQD 214
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/83 (50%), Positives = 54/83 (65%)
Query: 342 GNHAAILTSTTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATEGVVMVS 401
GN A +T+TT+E+++ + VYGE+ NL IRQISGA V V DP G + G V++S
Sbjct: 520 GNMFATVTNTTVEIIVSEHVFGSVYGEDGGNLDRIRQISGAIVTVYDPSVGTSGGKVVIS 579
Query: 402 GTSDQMRAAQSLIHAFILCGVTS 424
GT DQ AAQSL+ AFI G S
Sbjct: 580 GTPDQTFAAQSLLQAFIQTGQAS 602
>gi|255583245|ref|XP_002532387.1| nucleic acid binding protein, putative [Ricinus communis]
gi|223527911|gb|EEF29999.1| nucleic acid binding protein, putative [Ricinus communis]
Length = 688
Score = 140 bits (354), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 79/169 (46%), Positives = 102/169 (60%), Gaps = 10/169 (5%)
Query: 49 EVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMR 108
EV F+LLC GS+IGK G+IVRT QNETGASI A + S ER+V ISA EN E
Sbjct: 284 EVSFRLLCSNGAAGSIIGKKGTIVRTLQNETGASIMFAAPMSMSGERVVTISALENLESW 343
Query: 109 HSPAQDAVMRVHSRIAEIGFEPGQ--------AVVARLLVHSQQIGCLLGRG--GHIVSE 158
HSPAQ+A + V +R E E G V ARLLV S + CL+ +G G+I SE
Sbjct: 344 HSPAQNAAILVFARSVEHDIEKGHPSGLIEGATVTARLLVASDAVCCLIEKGGTGNIDSE 403
Query: 159 MRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLR 207
M +GA IR+ +Q C S D ++++ G Y +VQ+ALF +T +LR
Sbjct: 404 MIEVSGADIRILDGEQIMACASEDDVVIEITGEYKNVQNALFMVTGKLR 452
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 99/233 (42%), Gaps = 60/233 (25%)
Query: 44 MFYEEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVI---- 99
M +V F+++CH +G LIG+ GS + + +TG ++ + + S+ R++ I
Sbjct: 19 MLQPGQVAFRVVCHASIIGGLIGRSGSAISQIRRDTGCTVHCDEQVQGSDHRVITIVGPA 78
Query: 100 -----------------SARENSEMRHSPAQDAVMRVHSRIAEI---------------- 126
A E + S AQ+AV+RV R+ E+
Sbjct: 79 SPGKRITLNSTTCHDHNGAEEEEKELVSVAQEAVIRVCERMWEVDGQRERRGGVDNNSNN 138
Query: 127 -GFEPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAPRCGSPHDEI 185
G G LL + QIG ++G+GG V MRR +GA IR P P C S D++
Sbjct: 139 SGLGEG---YCGLLADTTQIGAVVGKGGKNVLRMRRESGADIRFLPP---PHCASKDDQL 192
Query: 186 VQVIGNYHSVQDALFHITSRLRETIFPMKRPGPNNGHSYLPPFPEMPPPPFRP 238
+Q+ G+ +V+ AL +T L + PP+ + P RP
Sbjct: 193 IQITGSILAVKKALVAVTDCLHDC----------------PPYEKDPTLLMRP 229
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 38/73 (52%), Positives = 53/73 (72%)
Query: 347 ILTSTTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATEGVVMVSGTSDQ 406
I+ +T IE+V+P+ + VYGE+ SNL+ +RQISGA V V +P G + +V++SGT DQ
Sbjct: 613 IVVNTIIELVVPEDTIGSVYGEDGSNLARLRQISGAKVEVREPSSGKSGRIVVISGTPDQ 672
Query: 407 MRAAQSLIHAFIL 419
AAQSL+ AFIL
Sbjct: 673 TNAAQSLLQAFIL 685
>gi|357145086|ref|XP_003573519.1| PREDICTED: KH domain-containing protein At4g18375-like
[Brachypodium distachyon]
Length = 632
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 106/374 (28%), Positives = 181/374 (48%), Gaps = 58/374 (15%)
Query: 49 EVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMR 108
+++ +++C DK+G +IGKGG +++ + E+GA+I + D D EE I+ +++ E ++
Sbjct: 312 DLLLRVVCPGDKIGLVIGKGGMTIKSIRKESGANIDVDDAKNDREESIITVTSTEATDDV 371
Query: 109 HSPAQDAVMRVHSRIAEIGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIR 168
S A +AV+ + ++I + G E + RLLV IGCL+G+GG IV++MR + A I
Sbjct: 372 KSAAVEAVLLLQAKIND-GIEDRMHI--RLLVPGNVIGCLIGKGGSIVNDMRNKSKAIIH 428
Query: 169 VFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFP---MKRPGPNNGHSYL 225
+ K PR S DE+V+V G ++DAL I RLRE + ++ +G +
Sbjct: 429 I-SKGSKPRRASSSDELVEVFGEVDKLRDALVQIVLRLREDVLKDSVERQNSDKDGKRTI 487
Query: 226 PPFPEMPPPPFRPRHNPASPGSYPSPVGPFHSMDRGMGPSQPFDHQAAFSHGMDPMVPPN 285
M F + P PS R + P +D + G+D + P +
Sbjct: 488 AITEPMYSSNF------SMPALLPST--------RQVSP-LSYDQRGEVERGLD-VYPRS 531
Query: 286 SDRIPFPYGSERPGHGPTFDRPPSPRSWTPQGVGGGDPRGFDASSGFTPRNRPVESGNHA 345
S + G+G + S+T + GG P
Sbjct: 532 SSYRYSSLQAVDDGYG-------AHSSYTSKSYGGRRP---------------------- 562
Query: 346 AILTSTTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATEGVVMVSGTSD 405
IE++IP ++ V G+ +NL +IR+ISGA++ + + K + V +SGT +
Sbjct: 563 ------DIEMIIPASGLSKVIGKRGTNLDNIRKISGADIEIIESKSSRHDHVAHISGTPE 616
Query: 406 QMRAAQSLIHAFIL 419
Q ++A++LI AFI+
Sbjct: 617 QRQSAENLIRAFIM 630
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 96/404 (23%), Positives = 171/404 (42%), Gaps = 87/404 (21%)
Query: 47 EEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISAR-ENS 105
+E VV+++LC +GS+IGK G ++ + + +T A +K+ D P +++R++++ +
Sbjct: 36 DELVVYRILCPDKVIGSVIGKNGKVINSIRQQTNAKVKVVDPYPGADKRVILVYCHVHHR 95
Query: 106 EMRH--------------SPAQDAVMRVHSRIAE---IGFEPGQAVVARLLVHSQQIGCL 148
++ H AQ+A+++VH I E I + A +LV + Q +
Sbjct: 96 DLTHRDIDVDDDDDREPVCAAQNALLKVHDAIVEALAINSDSDDEE-ANILVPASQAASV 154
Query: 149 LGRGGHIVSEMRRATGASIRVFPKDQAP---RCGSPHDEIVQVIGNYHSVQDALFHITSR 205
+G+ G ++ +R + +SI+V PKD + C D VQ+ G+ +V+ ALF +++
Sbjct: 155 IGKSGSVIKRLRSISKSSIKVRPKDPSEVTHSCAMSFDNFVQITGDARAVKKALFAVSAI 214
Query: 206 LRET----IFPMKRPGPNNGHSYLPPFPEMPPPPFRPRHNPASPGSYPSPVGPFHSMDRG 261
+ ++ I P++ E+PP P P P S F+S+ G
Sbjct: 215 IYKSPSKEIIPLE-----------TSVQELPPSIIIPSELPVYPASN------FYSLSDG 257
Query: 262 MGPSQPFDHQAAFSHGMDPMV--PPNSDRIP-FPYGSERPGHGPTFDR--PPSPRSWTPQ 316
PS H P++ P + RIP F ++ G P + P P TP+
Sbjct: 258 AMPS---------GHPSLPILGAPHHVSRIPEFTVPADAHGRLPIYQSMVPAIPTYSTPK 308
Query: 317 GVGGGDPRGFDASSGFTPRNRPVESGNHAAILTSTTIEVVIPQLYMAHVYGENNSNLSHI 376
G G + VV P + V G+ + I
Sbjct: 309 GSG------------------------------DLLLRVVCPGDKIGLVIGKGGMTIKSI 338
Query: 377 RQISGANVVVNDPKPGATEGVVMVSGTSDQMRAAQSLIHAFILC 420
R+ SGAN+ V+D K E ++ V+ T + + A +L
Sbjct: 339 RKESGANIDVDDAKNDREESIITVTSTEATDDVKSAAVEAVLLL 382
>gi|148905782|gb|ABR16055.1| unknown [Picea sitchensis]
Length = 650
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 83/194 (42%), Positives = 122/194 (62%), Gaps = 2/194 (1%)
Query: 33 PGHETVGGRNRMFYEEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDS 92
P G EE ++LC DK+G +IGKGG+ +++ +N+TGASI++ D +S
Sbjct: 299 PSFSKFGNSTTKKTSEEFSIRVLCPNDKIGGVIGKGGNTIKSMRNDTGASIRVEDAQTES 358
Query: 93 EERIVVISARENSEMRHSPAQDAVMRVHSRIAEIGFEPGQAVVARLLVHSQQIGCLLGRG 152
+ER++V+SA E ++ R SP +AV+ + + + + G A+ R LV S+ IGCLLG+G
Sbjct: 359 DERVIVVSATELADDRVSPTIEAVLLLQGKTSGTTDKDG-AISTRFLVPSKHIGCLLGKG 417
Query: 153 GHIVSEMRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFP 212
G+I+SEMR+ T A+IR+F KD+ P C S ++E+VQV G +DAL I RLRE IF
Sbjct: 418 GNIISEMRKQTRANIRIFRKDERPICVSENEELVQVTGEPGVAKDALIQILKRLRENIFK 477
Query: 213 MKRPGPNNGHSYLP 226
K G +N S LP
Sbjct: 478 DK-DGASNTDSVLP 490
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 73/231 (31%), Positives = 125/231 (54%), Gaps = 34/231 (14%)
Query: 48 EEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEM 107
+ V+++LC + +GS+IGKGG ++++ + ET + I++AD +P +ER++VI + S+
Sbjct: 40 DSTVYRILCPSNVIGSVIGKGGKVIKSMRQETRSKIRVADAVPGVDERVIVIFSSPLSKD 99
Query: 108 RH-------------SPAQDAVMRVHSRIAEIG------FEPGQAVVARLLVHSQQIGCL 148
+ PAQD ++RVHS I + + + ARLLV + QIG L
Sbjct: 100 KEKDDDDDDNENEPVCPAQDGLLRVHSVIVQESSGKDNDADKKRPQDARLLVANSQIGSL 159
Query: 149 LGRGGHIVSEMRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRL-- 206
+G+GG+ + ++R +GA I++ KD+ P C DE+V + G+ +V+ AL+ +++ L
Sbjct: 160 IGKGGNNIQKLRSESGAQIQIPRKDELPGCAFSFDELVVISGDAAAVKKALYAVSAFLFK 219
Query: 207 ---RETIFPMKRPGPNNGHSYLPP--FPEMPPPPFRPR-------HNPASP 245
+E I P P S LPP P PP + P+ HN ++P
Sbjct: 220 HPPKEQI-PWSVILPETNQSSLPPSGVPTFPPANYLPQGDSLFGHHNLSAP 269
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/81 (48%), Positives = 51/81 (62%)
Query: 341 SGNHAAILTSTTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATEGVVMV 400
SG H + + E IP ++ V G SN+SHIR+ISGA V + DP GA++ VV +
Sbjct: 558 SGGHLNSSLAPSHEFAIPNSAVSSVLGRGGSNISHIREISGATVKLRDPITGASDRVVEI 617
Query: 401 SGTSDQMRAAQSLIHAFILCG 421
SGT +Q AAQSLI AF+L G
Sbjct: 618 SGTPEQSHAAQSLIQAFMLTG 638
>gi|356516077|ref|XP_003526723.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine
max]
Length = 647
Score = 139 bits (349), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 67/186 (36%), Positives = 115/186 (61%), Gaps = 1/186 (0%)
Query: 26 SRGYSSGPGHETVGGRNRMFYEEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKI 85
S Y+ PG V + FY EE+VF++LC ++KV +IG+ IV Q+E G +K+
Sbjct: 303 SLSYAMEPGAAPVVDDAQGFYGEELVFRILCPVEKVDLIIGESDGIVEFLQSEVGVDVKV 362
Query: 86 ADILPDSEERIVVISARENSEMRHSPAQDAVMRVHSRIAEIGFEPGQAVVARLLVHSQQI 145
D + S+E+I++I++ E + PAQ+A++ + +RI ++ + + RL+V S +I
Sbjct: 363 TDPVGGSDEQIIIITSEEGPDDELFPAQEALLHIQTRIVDLVLDKDNTITTRLVVPSSEI 422
Query: 146 GCLLGRGGHIVSEMRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSR 205
CL G+ + SE+RR TGA+I++ P+D P C + DE+VQ++G + +DA+ +TSR
Sbjct: 423 ECLDGKDVSL-SEIRRLTGANIQILPRDDLPLCVAKTDELVQIVGEIKAARDAVVEVTSR 481
Query: 206 LRETIF 211
LR ++
Sbjct: 482 LRSYLY 487
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 92/269 (34%), Positives = 137/269 (50%), Gaps = 29/269 (10%)
Query: 52 FKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISA--RENSEMR- 108
+++LCH K G +IGK GSI+++ + TGA I + +++P EERI+ IS R + E R
Sbjct: 63 YRILCHDLKAGGVIGKSGSIIKSIRQHTGAWINVHELMPGDEERIIEISDTRRRDPEGRM 122
Query: 109 --HSPAQDAVMRVHSRIAEIGFEPGQA------------------VVARLLVHSQQIGCL 148
SPAQ+A++ +H RI E G A V RL+V +GCL
Sbjct: 123 PSFSPAQEALLLIHERILESDAAFGVAEDDEEYGAGRGGGAGRDRVATRLVVSRMHVGCL 182
Query: 149 LGRGGHIVSEMRRATGASIRVFPKD-QAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLR 207
LG+GG I+ +MR T IR+ P+D PRC S +EIVQV+G+ ++V++AL I+SRLR
Sbjct: 183 LGKGGKIIEQMRMETKTQIRILPRDHNLPRCVSMSEEIVQVVGDVNAVKNALVIISSRLR 242
Query: 208 ETIFPMKRPGPNNGHSYLPPFPEMPPPPFRPRHNPASPGSYPSPVGPFHSMDRGMGPSQP 267
E+ + +G + P P + P + GS S V RG +
Sbjct: 243 ES--QHRDRSHFHGRVHSPERFFSPDDDYVPH---VTSGSRRSSVDGASFGSRGSNTNSR 297
Query: 268 FDHQAAFSHGMDPMVPPNSDRIPFPYGSE 296
++ + S+ M+P P D YG E
Sbjct: 298 NNNHPSLSYAMEPGAAPVVDDAQGFYGEE 326
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 49/73 (67%)
Query: 347 ILTSTTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATEGVVMVSGTSDQ 406
++T +T+EVVIP+ + + ++ S L+ I ++SGANV + + +P T+ ++ +SGT +Q
Sbjct: 568 LVTRSTLEVVIPEYAVPKLIAKSKSKLAQISELSGANVTLVEDRPDVTQKIIQISGTPEQ 627
Query: 407 MRAAQSLIHAFIL 419
AQSL+ FIL
Sbjct: 628 AERAQSLLQGFIL 640
>gi|21553916|gb|AAM62999.1| unknown [Arabidopsis thaliana]
Length = 644
Score = 137 bits (346), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 113/393 (28%), Positives = 184/393 (46%), Gaps = 71/393 (18%)
Query: 39 GGRNRMFYEEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPD-SEERIV 97
GG +R E++ K++C K+G +IGKGG ++ + +G+ I++ D + ++ ++
Sbjct: 309 GGSSR---SEKLAIKVICASSKIGRVIGKGGLTIKGIRQASGSHIEVNDSRTNHDDDCVI 365
Query: 98 VISARENSEMRHSPAQDAVMRVHSRIAEIGFEPGQAVVARLLVHSQQIGCLLGRGGHIVS 157
++A E+ + S A +AV+ + +I + E V +LLV S+ IGC++G+ G I+S
Sbjct: 366 TVTATESPDDLKSMAVEAVLLLQEKIND---EDEDKVKMQLLVSSKVIGCIIGKSGSIIS 422
Query: 158 EMRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKRPG 217
E+R+ T A I + + P+ P+DE+V++ G +V+DAL I RLR+ + + G
Sbjct: 423 EIRKRTKADIHISKGNNTPKSADPNDELVEISGEVSNVRDALIQIVLRLRDDVLRDRETG 482
Query: 218 PNNGHSYLPPFPEMPPPPFRPRHNP-----------ASPGSYPSPVGPFHSMDRGMGPSQ 266
N PP R +N A P S+ S V S+D
Sbjct: 483 SRN------------QPPARSENNNFFSSSSSNTGLALPQSFMSSVPQVASVD------- 523
Query: 267 PFDHQAAFSHGMDPMVPPNSDRIPFPYGSERPGHGPTFDRPPSPRSWTPQGVGGGDPRGF 326
FD + M + P+S I + YGS P + S + GG P+
Sbjct: 524 -FDRRPETGSSMSML--PSSGGI-YGYGS-----FPVGNTSYGSNSSYSSNLYGGLPQ-- 572
Query: 327 DASSGFTPRNRPVESGNHAAILTSTTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVV 386
STT+EV IP + V G NL +IR+ISGA + +
Sbjct: 573 -----------------------STTMEVRIPANAVGKVMGRGGGNLDNIRRISGAMIEI 609
Query: 387 NDPKPGATEGVVMVSGTSDQMRAAQSLIHAFIL 419
+D K V ++SGTS+Q R A++L AFI+
Sbjct: 610 SDSKNSHGGRVALISGTSEQKRTAENLFQAFIM 642
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 96/380 (25%), Positives = 150/380 (39%), Gaps = 79/380 (20%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISAR------- 102
VV+++LC +GS+IGK G ++ + ET A IK+ D P ER++ I
Sbjct: 44 VVYRILCPSGVMGSVIGKSGKVINLIRQETRARIKVVDPFPGCSERVITIFCSVSEKKDI 103
Query: 103 ---ENSEMRHS----PAQDAVMRVHSRI-AEIGFEPGQAVV-------ARLLVHSQQIGC 147
E SE+ +S AQ A+++VH I A + + RLLV S Q
Sbjct: 104 VDIEYSELDYSVPLCSAQAALLKVHDAIVASLATAAENTKIDRDDFRECRLLVPSSQCSI 163
Query: 148 LLGRGGHIVSEMRRATGASIRVFPKDQAP---RCGSPHDEIVQVIGNYHSVQDALFHITS 204
++G+ G I+ +R T A+++V KD + C D IV + G SV+ ALF +++
Sbjct: 164 VIGKSGSIIKNIRGRTRANVKVVSKDASDPSHTCAMDFDNIVMISGETESVKKALFAVSA 223
Query: 205 RLRETIFPMKRPGPNNGHSYLPPFPEMPPPPFRPRHNPASPGSYPSPVGPFHSMDRGMGP 264
M + P E+P P+ YP G+ P
Sbjct: 224 -------IMYKVSPREQIPLDTTVQEVPASIII----PSDLSIYPQA---------GLYP 263
Query: 265 SQPFDHQAAFSHGMDPMVPPNSDRIPFPYGSERPGHGPTFDRPPSPRSWTPQGVGGGDPR 324
SQ + F HG + V +P YG P F P G GG
Sbjct: 264 SQ----DSIFQHGAN--VSSFIGTLPQGYGENAANPLPVFSASALP---VVHGFGG---- 310
Query: 325 GFDASSGFTPRNRPVESGNHAAILTSTTIEVVIPQLYMAHVYGENNSNLSHIRQISGANV 384
+ R+ + I+V+ + V G+ + IRQ SG+++
Sbjct: 311 --------SSRSEKL------------AIKVICASSKIGRVIGKGGLTIKGIRQASGSHI 350
Query: 385 VVNDPKPG-ATEGVVMVSGT 403
VND + + V+ V+ T
Sbjct: 351 EVNDSRTNHDDDCVITVTAT 370
>gi|413955311|gb|AFW87960.1| hypothetical protein ZEAMMB73_110576 [Zea mays]
gi|413955312|gb|AFW87961.1| hypothetical protein ZEAMMB73_110576 [Zea mays]
Length = 543
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 73/173 (42%), Positives = 105/173 (60%), Gaps = 14/173 (8%)
Query: 48 EEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVI--SAR--- 102
++ V++ LC K+GS+IG+GG I + + ET A I+I + +P EER++ I S+R
Sbjct: 36 DDTVYRYLCASRKIGSIIGRGGEIAKQLRTETQAKIRIGESVPGCEERVITIFSSSRRTN 95
Query: 103 --ENSEMRHSPAQDAVMRVHSRIA-------EIGFEPGQAVVARLLVHSQQIGCLLGRGG 153
+++E + PAQDA+ RVH R+A E E V RLLV S QIGC+LG+GG
Sbjct: 96 TIDDAEDKVCPAQDALFRVHERLATDESFGNEDSEEISPQVTVRLLVPSDQIGCILGKGG 155
Query: 154 HIVSEMRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRL 206
HI+ +R TGA IRV KD P C DE++Q+ G+ V+ AL ++SRL
Sbjct: 156 HIIQGIRSETGAQIRVLSKDHIPACAISGDELLQISGDMVVVKKALCQVSSRL 208
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 85/257 (33%), Positives = 132/257 (51%), Gaps = 22/257 (8%)
Query: 48 EEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPD-SEERIVVISARENSE 106
+E +LLC VG +IGKGG I++ + E+GA IK+A D ++ I+ +SA+E E
Sbjct: 276 KEFSLRLLCAAANVGGVIGKGGGIIKQIRQESGALIKVASSNSDPDDDCIITVSAKEFFE 335
Query: 107 MRHSPAQDAVMRVHSRIAEIGFE--PGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATG 164
SP DA +R+ R +E Q+ RLLV + +IGCL+G+GG I++E+RR +
Sbjct: 336 DPVSPTIDAAVRLQLRCSEKSDSELAEQSYTTRLLVSTSRIGCLIGKGGSIITEIRRTSR 395
Query: 165 ASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKRPGPNNGHSY 224
A+IR+ K+ P+ + +E+VQ+ G + AL I +RL+ F +R G
Sbjct: 396 ANIRILSKENVPKVAAEDEEMVQISGGLDVARHALVQIATRLKANFF--EREGS------ 447
Query: 225 LPPFPEMPPPPFRPRHNPASPGSYPSPVGPFHSMDRGMGPSQPFDHQAAFSHGMDPMVPP 284
L FP + P ++P G S + + R P + + +AF D M+P
Sbjct: 448 LSAFPSVIP------YHPLPAGVSVSDEPKY--LSRDTKPVGHYLYSSAF-RTSDDMIP- 497
Query: 285 NSDRIPFPYGSERPGHG 301
SD GS+ PG G
Sbjct: 498 -SDSYASYGGSQAPGGG 513
>gi|413955310|gb|AFW87959.1| hypothetical protein ZEAMMB73_110576 [Zea mays]
Length = 528
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 73/173 (42%), Positives = 105/173 (60%), Gaps = 14/173 (8%)
Query: 48 EEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVI--SAR--- 102
++ V++ LC K+GS+IG+GG I + + ET A I+I + +P EER++ I S+R
Sbjct: 36 DDTVYRYLCASRKIGSIIGRGGEIAKQLRTETQAKIRIGESVPGCEERVITIFSSSRRTN 95
Query: 103 --ENSEMRHSPAQDAVMRVHSRIA-------EIGFEPGQAVVARLLVHSQQIGCLLGRGG 153
+++E + PAQDA+ RVH R+A E E V RLLV S QIGC+LG+GG
Sbjct: 96 TIDDAEDKVCPAQDALFRVHERLATDESFGNEDSEEISPQVTVRLLVPSDQIGCILGKGG 155
Query: 154 HIVSEMRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRL 206
HI+ +R TGA IRV KD P C DE++Q+ G+ V+ AL ++SRL
Sbjct: 156 HIIQGIRSETGAQIRVLSKDHIPACAISGDELLQISGDMVVVKKALCQVSSRL 208
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 85/257 (33%), Positives = 132/257 (51%), Gaps = 22/257 (8%)
Query: 48 EEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPD-SEERIVVISARENSE 106
+E +LLC VG +IGKGG I++ + E+GA IK+A D ++ I+ +SA+E E
Sbjct: 276 KEFSLRLLCAAANVGGVIGKGGGIIKQIRQESGALIKVASSNSDPDDDCIITVSAKEFFE 335
Query: 107 MRHSPAQDAVMRVHSRIAEIGFE--PGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATG 164
SP DA +R+ R +E Q+ RLLV + +IGCL+G+GG I++E+RR +
Sbjct: 336 DPVSPTIDAAVRLQLRCSEKSDSELAEQSYTTRLLVSTSRIGCLIGKGGSIITEIRRTSR 395
Query: 165 ASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKRPGPNNGHSY 224
A+IR+ K+ P+ + +E+VQ+ G + AL I +RL+ F +R G
Sbjct: 396 ANIRILSKENVPKVAAEDEEMVQISGGLDVARHALVQIATRLKANFF--EREGS------ 447
Query: 225 LPPFPEMPPPPFRPRHNPASPGSYPSPVGPFHSMDRGMGPSQPFDHQAAFSHGMDPMVPP 284
L FP + P ++P G S + + R P + + +AF D M+P
Sbjct: 448 LSAFPSVIP------YHPLPAGVSVSDEPKY--LSRDTKPVGHYLYSSAF-RTSDDMIP- 497
Query: 285 NSDRIPFPYGSERPGHG 301
SD GS+ PG G
Sbjct: 498 -SDSYASYGGSQAPGGG 513
>gi|255561850|ref|XP_002521934.1| nucleic acid binding protein, putative [Ricinus communis]
gi|223538859|gb|EEF40458.1| nucleic acid binding protein, putative [Ricinus communis]
Length = 704
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 71/203 (34%), Positives = 119/203 (58%), Gaps = 7/203 (3%)
Query: 15 FHQRGYAPGYHSRGYSS---GPGHET---VGGRNRMFYEEEVVFKLLCHLDKVGSLIGKG 68
F R P Y + YSS G E V + FY +++VF++LC DKV ++G+
Sbjct: 303 FGSRASGPNYRNSNYSSRQYGYNVEAGAPVADSAQPFYGDDLVFRMLCPADKVNKVVGES 362
Query: 69 GSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMRHSPAQDAVMRVHSRIAEIGF 128
I+ QN+ G +K++D + S+E++++IS+ E + PAQ+A++ + + I ++
Sbjct: 363 DGILDLLQNDIGVDVKVSDPVSGSDEQMIIISSEEGPDDELFPAQEALLHIQTHIIDLVP 422
Query: 129 EPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAPRCGSPHDEIVQV 188
+ + +L+V S +IGCL GR G + SEM R TGA I++ P+++ P C S DE+VQ+
Sbjct: 423 DSDNIIKTKLIVSSGEIGCLEGRDGSL-SEMERLTGAKIQILPREKLPACVSEADELVQI 481
Query: 189 IGNYHSVQDALFHITSRLRETIF 211
G + +DAL +TSRLR ++
Sbjct: 482 EGEIKAARDALVEVTSRLRSYLY 504
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 71/183 (38%), Positives = 108/183 (59%), Gaps = 25/183 (13%)
Query: 52 FKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISA--RENSEMR- 108
+++LCH K G +IGK G+I+++ + TGA I + +++P EERI+ IS R + E R
Sbjct: 77 YRILCHDMKAGGVIGKSGTIIKSIRQHTGAWINVHELIPGDEERIIEISDTRRRDPEGRM 136
Query: 109 --HSPAQDAVMRVHSRIAEIGFEPGQA-------------------VVARLLVHSQQIGC 147
SPAQ+A+ +H RI E + G + V RL+V +GC
Sbjct: 137 PAFSPAQEALFLIHDRILESDGQFGMSYANEEDEYGGRGINNSNNRVATRLVVSRMHVGC 196
Query: 148 LLGRGGHIVSEMRRATGASIRVFPKDQA-PRCGSPHDEIVQVIGNYHSVQDALFHITSRL 206
LLG+GG I+ +MR T IR+ P+D PRC S +EIVQV+G+ ++V++A+ I+SRL
Sbjct: 197 LLGKGGKIIEQMRIETKTQIRILPRDHTLPRCVSMSEEIVQVVGDVNAVKNAIAIISSRL 256
Query: 207 RET 209
RE+
Sbjct: 257 RES 259
Score = 44.7 bits (104), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 29/41 (70%)
Query: 379 ISGANVVVNDPKPGATEGVVMVSGTSDQMRAAQSLIHAFIL 419
+SGANV + + +P TE ++ +SGT +Q+ AQSL+ FIL
Sbjct: 595 LSGANVTLLEDRPEVTEKIIQISGTPEQVERAQSLLQGFIL 635
>gi|218200638|gb|EEC83065.1| hypothetical protein OsI_28176 [Oryza sativa Indica Group]
gi|222640076|gb|EEE68208.1| hypothetical protein OsJ_26373 [Oryza sativa Japonica Group]
Length = 431
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 106/372 (28%), Positives = 179/372 (48%), Gaps = 64/372 (17%)
Query: 49 EVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMR 108
E+V ++LC K+G +IGKGG +++ + E+GA I + D D EE I+ I++ E ++
Sbjct: 121 ELVLRVLCPAGKIGLVIGKGGVTIKSIRKESGARIDVDDSKNDREESIITITSNEATDDA 180
Query: 109 HSPAQDAVMRVHSRIAEIGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIR 168
S A +AV+ + S+I + + IGCL+G+GG IV++MR T A+I
Sbjct: 181 KSAAVEAVLLLQSKINDDN-------------EGKVIGCLIGKGGSIVNDMRSKTKAAIY 227
Query: 169 VFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKRPGPNNGHSYLPPF 228
+ K + PR S DE+V+V G +++DAL I RLR+ + R + +S
Sbjct: 228 I-SKGEKPRKASSSDELVEVFGEVENLRDALVQIVLRLRDDVL---RDSVDRQNS----- 278
Query: 229 PEMPPPPFRPRHNPASPGSYPSP-VGPFHSMDRGMGPSQPFDHQAAFSHGMDPMVPPNSD 287
E +P SYP P + P+ +G +DH+ G++ V P+S
Sbjct: 279 -EKDGKLTVATTDPLYASSYPLPALLPYRQQITPLG----YDHRGDIERGLE--VYPHSS 331
Query: 288 RIPFPYGSERPGHGPTFDRPPSPRSWTPQGVGGGDPRGFDASSGFTPRNRPVESGNHAAI 347
+ Y S + D + S+ +G GG P
Sbjct: 332 L--YGYSSLQ----AIDDGYSAVSSYASKGYGGRPPH----------------------- 362
Query: 348 LTSTTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATEGVVMVSGTSDQM 407
+E+ IP ++ V G++ +NL +I +ISGA++ + + K V +SGT++Q
Sbjct: 363 -----MEMTIPASGLSKVMGKHGTNLDNIIKISGAHIEIIESKSSRHGHVARISGTTEQK 417
Query: 408 RAAQSLIHAFIL 419
++A++LI AFI+
Sbjct: 418 QSAENLIKAFIM 429
>gi|359386146|gb|AEV43362.1| poly C-binding protein [Citrus sinensis]
Length = 569
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 118/462 (25%), Positives = 190/462 (41%), Gaps = 120/462 (25%)
Query: 49 EVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVI--------- 99
+ V+++LC K+G +IGK G+IV++ + ET A I +AD +P SEER+++I
Sbjct: 46 DTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAK 105
Query: 100 ----------SARENSEMRHSPAQDAVMRVHSRIAEIGFEPGQA---------VVARLLV 140
++ S H AQDA+++VH RI E G A + ARLLV
Sbjct: 106 TQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLV 165
Query: 141 HSQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALF 200
+ +GCLLG+ G ++ +R TGA+IRV P D+ P C DE+VQ+ G + + AL+
Sbjct: 166 PNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALY 225
Query: 201 HITSRLRETIFPMKRP-------GPNNGHSYLPPFPEMPPPPFRPRHNPASPGSYPSPVG 253
+++ L + K P G N HS PP P H P S+P+
Sbjct: 226 EVSTLLHQNPRKDKPPSSFPQAYGGQNFHS--------PPAPMADMH-PLGNSSWPARNS 276
Query: 254 PFHSMDRGMGPSQPF-----DHQAAFSHGMDPMVPP------------------------ 284
H M PS P+ D + G PP
Sbjct: 277 SLHGM-----PSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGV 331
Query: 285 ------NSDRIPFPYGS------------ERPGHGPTFDRPPSPRSWTPQGVGGGDPRGF 326
N ++ G+ ER F+ +PRS T +
Sbjct: 332 IGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWNPRSQTIDAI-------- 383
Query: 327 DASSGFTPRNRPVESGNHAAILTSTTIEVVIPQLYMAHVYGENNSNLSHIR-------QI 379
+N+ E I T +++P + + G+ ++ +R ++
Sbjct: 384 -----LQLQNKTSEFSEKGTITT----RLLVPSSKVGCILGQGGHVINEMRRRTQADIRV 434
Query: 380 SGANVVVNDPKPGATEGVVMVSGTSDQMRAAQSLIHAFILCG 421
GA V + DP PG++E +V + G+S+ + +A +F+ G
Sbjct: 435 VGARVKLQDPHPGSSECIVDIRGSSEHLISAHGTYQSFMTSG 476
>gi|414870928|tpg|DAA49485.1| TPA: hypothetical protein ZEAMMB73_398324 [Zea mays]
Length = 770
Score = 135 bits (340), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 69/194 (35%), Positives = 112/194 (57%), Gaps = 29/194 (14%)
Query: 44 MFYEE-EVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVI--- 99
MF E E ++++LC + K+GS++G+GG IV+ + ET A I++AD +P ++ER+++I
Sbjct: 36 MFSEPIETIYRILCPVKKIGSVLGRGGDIVKALREETKAKIRVADSIPGADERVIIIFNY 95
Query: 100 ----------SARENSE-----MRHSPAQDAVMRVHSRIA----------EIGFEPGQAV 134
+ +NS+ H AQDA++++H +I + E V
Sbjct: 96 QNEPEPTDEAAEEKNSDGLGNFKSHCFAQDALLKIHDKIVSDEIHDEVANDEKSESADDV 155
Query: 135 VARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHS 194
AR+LV Q+GCLLG+GG I+ ++R TGA IRV P + P+C DE+VQ+ G
Sbjct: 156 TARILVQGNQVGCLLGKGGSIIQQLRSNTGAGIRVLPSENLPQCALKSDELVQISGAPSL 215
Query: 195 VQDALFHITSRLRE 208
V+ AL+ I++RL +
Sbjct: 216 VRKALYEISTRLHQ 229
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 64/161 (39%), Positives = 100/161 (62%), Gaps = 3/161 (1%)
Query: 48 EEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPD-SEERIVVISARENSE 106
EE ++LC + +GS+IGK G+ VR + +TGA IK+ +I D S ER+++IS+ E
Sbjct: 291 EEFSIRILCASELIGSVIGKSGANVRRVEQQTGARIKVQEIDKDASGERLIIISSNEIPA 350
Query: 107 MRHSPAQDAVMRVHSRIAEIGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGAS 166
SPA +A++ +H +++ + + RL+V S ++GC++G GG ++++MRR TGA
Sbjct: 351 EPISPAIEALILLHDKVSAPSEKHHSST--RLVVPSSKVGCIIGEGGKVITDMRRRTGAE 408
Query: 167 IRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLR 207
IRV+ K P+ S DE+VQV G + AL I SRLR
Sbjct: 409 IRVYSKADKPKYLSFDDELVQVAGPPTIARGALTEIASRLR 449
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 44/68 (64%)
Query: 351 TTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATEGVVMVSGTSDQMRAA 410
+TIE+ IP + + G NL+ IRQ+SGA + +++ G++E VV + GT DQ +AA
Sbjct: 681 STIELRIPNSSLGSIVGAGGVNLAEIRQVSGARLRLHEAHAGSSESVVEIQGTLDQAKAA 740
Query: 411 QSLIHAFI 418
QSL+ FI
Sbjct: 741 QSLLQGFI 748
Score = 42.4 bits (98), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 32/51 (62%)
Query: 35 HETVGGRNRMFYEEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKI 85
H+ V + ++V ++L ++VG L+GKGGSI++ ++ TGA I++
Sbjct: 140 HDEVANDEKSESADDVTARILVQGNQVGCLLGKGGSIIQQLRSNTGAGIRV 190
>gi|195655947|gb|ACG47441.1| nucleic acid binding protein [Zea mays]
gi|414870927|tpg|DAA49484.1| TPA: nucleic acid binding protein [Zea mays]
Length = 769
Score = 135 bits (340), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 69/194 (35%), Positives = 112/194 (57%), Gaps = 29/194 (14%)
Query: 44 MFYEE-EVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVI--- 99
MF E E ++++LC + K+GS++G+GG IV+ + ET A I++AD +P ++ER+++I
Sbjct: 36 MFSEPIETIYRILCPVKKIGSVLGRGGDIVKALREETKAKIRVADSIPGADERVIIIFNY 95
Query: 100 ----------SARENSE-----MRHSPAQDAVMRVHSRIA----------EIGFEPGQAV 134
+ +NS+ H AQDA++++H +I + E V
Sbjct: 96 QNEPEPTDEAAEEKNSDGLGNFKSHCFAQDALLKIHDKIVSDEIHDEVANDEKSESADDV 155
Query: 135 VARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHS 194
AR+LV Q+GCLLG+GG I+ ++R TGA IRV P + P+C DE+VQ+ G
Sbjct: 156 TARILVQGNQVGCLLGKGGSIIQQLRSNTGAGIRVLPSENLPQCALKSDELVQISGAPSL 215
Query: 195 VQDALFHITSRLRE 208
V+ AL+ I++RL +
Sbjct: 216 VRKALYEISTRLHQ 229
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 64/161 (39%), Positives = 100/161 (62%), Gaps = 3/161 (1%)
Query: 48 EEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPD-SEERIVVISARENSE 106
EE ++LC + +GS+IGK G+ VR + +TGA IK+ +I D S ER+++IS+ E
Sbjct: 291 EEFSIRILCASELIGSVIGKSGANVRRVEQQTGARIKVQEIDKDASGERLIIISSNEIPA 350
Query: 107 MRHSPAQDAVMRVHSRIAEIGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGAS 166
SPA +A++ +H +++ + + RL+V S ++GC++G GG ++++MRR TGA
Sbjct: 351 EPISPAIEALILLHDKVSAPSEKHHSST--RLVVPSSKVGCIIGEGGKVITDMRRRTGAE 408
Query: 167 IRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLR 207
IRV+ K P+ S DE+VQV G + AL I SRLR
Sbjct: 409 IRVYSKADKPKYLSFDDELVQVAGPPTIARGALTEIASRLR 449
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 44/68 (64%)
Query: 351 TTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATEGVVMVSGTSDQMRAA 410
+TIE+ IP + + G NL+ IRQ+SGA + +++ G++E VV + GT DQ +AA
Sbjct: 680 STIELRIPNSSLGSIVGAGGVNLAEIRQVSGARLRLHEAHAGSSESVVEIQGTLDQAKAA 739
Query: 411 QSLIHAFI 418
QSL+ FI
Sbjct: 740 QSLLQGFI 747
Score = 42.4 bits (98), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 32/51 (62%)
Query: 35 HETVGGRNRMFYEEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKI 85
H+ V + ++V ++L ++VG L+GKGGSI++ ++ TGA I++
Sbjct: 140 HDEVANDEKSESADDVTARILVQGNQVGCLLGKGGSIIQQLRSNTGAGIRV 190
>gi|7671496|emb|CAB89337.1| putative protein [Arabidopsis thaliana]
Length = 568
Score = 135 bits (340), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 71/175 (40%), Positives = 103/175 (58%), Gaps = 13/175 (7%)
Query: 48 EEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVI-------S 100
++ VF+ LC + K+GS+IG+GG IV+ +N+T + I+I + +P +ER++ I +
Sbjct: 48 DDTVFRYLCPVKKIGSVIGRGGDIVKQLRNDTRSKIRIGEAIPGCDERVITIYSPSDETN 107
Query: 101 ARENSEMRHSPAQDAVMRVHSRI------AEIGFEPGQAVVARLLVHSQQIGCLLGRGGH 154
A + E SPAQDA+ R+H R+ +E E + V A+LLV S QIGC+LGRGG
Sbjct: 108 AFGDGEKVLSPAQDALFRIHDRVVADDARSEDSPEGEKQVTAKLLVPSDQIGCILGRGGQ 167
Query: 155 IVSEMRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRET 209
IV +R TGA IR+ P C DE++Q+ G V+ AL I SRL E
Sbjct: 168 IVQNIRSETGAQIRIVKDRNMPLCALNSDELIQISGEVLIVKKALLQIASRLHEN 222
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 72/225 (32%), Positives = 113/225 (50%), Gaps = 43/225 (19%)
Query: 49 EVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMR 108
E +L+ ++ + S+IGKGG+++ + ET A+IK+ + + ++ ISARE E
Sbjct: 283 EFFIRLVSPVENIASVIGKGGALINQLRQETRATIKVDSSRTEGNDCLITISAREVFEDA 342
Query: 109 HSPAQDAVMRVHSRIAEIGFEPGQAVVA---RLLVHSQQIGCLLGRGGHIVSEMRRATGA 165
+SP +AVMR+ + ++ E +V+ RLLV S +IGC+LG+GG I++EMRR T A
Sbjct: 343 YSPTIEAVMRLQPKCSD-KVERDSGLVSFTTRLLVPSSRIGCILGKGGAIITEMRRMTKA 401
Query: 166 SIRVFPKDQAPRCGSPHDEIVQV-----------------------------------IG 190
+IR+ K+ P+ S DE+VQV G
Sbjct: 402 NIRILGKENLPKVASDDDEMVQVNFMVLLLKFSLQFLLSRLRYFTWSVNSNSNFDVQISG 461
Query: 191 NYHSVQDALFHITSRLRETIFPMKRPGPNNGHSYLPPFPEMPPPP 235
++AL ITSRLR +F R G + + +P P +P P
Sbjct: 462 ELDVAKEALIQITSRLRANVF--DREGAVS--ALMPVLPYVPVAP 502
Score = 43.1 bits (100), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 48/84 (57%), Gaps = 11/84 (13%)
Query: 47 EEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSE 106
E++V KLL D++G ++G+GG IV+ ++ETGA I+I ++R + + A + E
Sbjct: 144 EKQVTAKLLVPSDQIGCILGRGGQIVQNIRSETGAQIRIV------KDRNMPLCALNSDE 197
Query: 107 MRHSPAQ-----DAVMRVHSRIAE 125
+ + A++++ SR+ E
Sbjct: 198 LIQISGEVLIVKKALLQIASRLHE 221
>gi|30685269|ref|NP_851040.1| RNA-binding KH domain-containing protein [Arabidopsis thaliana]
gi|30685276|ref|NP_197031.3| RNA-binding KH domain-containing protein [Arabidopsis thaliana]
gi|110737265|dbj|BAF00580.1| hypothetical protein [Arabidopsis thaliana]
gi|110738501|dbj|BAF01176.1| hypothetical protein [Arabidopsis thaliana]
gi|332004758|gb|AED92141.1| RNA-binding KH domain-containing protein [Arabidopsis thaliana]
gi|332004759|gb|AED92142.1| RNA-binding KH domain-containing protein [Arabidopsis thaliana]
Length = 548
Score = 135 bits (340), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 71/175 (40%), Positives = 103/175 (58%), Gaps = 13/175 (7%)
Query: 48 EEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVI-------S 100
++ VF+ LC + K+GS+IG+GG IV+ +N+T + I+I + +P +ER++ I +
Sbjct: 48 DDTVFRYLCPVKKIGSVIGRGGDIVKQLRNDTRSKIRIGEAIPGCDERVITIYSPSDETN 107
Query: 101 ARENSEMRHSPAQDAVMRVHSRI------AEIGFEPGQAVVARLLVHSQQIGCLLGRGGH 154
A + E SPAQDA+ R+H R+ +E E + V A+LLV S QIGC+LGRGG
Sbjct: 108 AFGDGEKVLSPAQDALFRIHDRVVADDARSEDSPEGEKQVTAKLLVPSDQIGCILGRGGQ 167
Query: 155 IVSEMRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRET 209
IV +R TGA IR+ P C DE++Q+ G V+ AL I SRL E
Sbjct: 168 IVQNIRSETGAQIRIVKDRNMPLCALNSDELIQISGEVLIVKKALLQIASRLHEN 222
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 71/190 (37%), Positives = 113/190 (59%), Gaps = 8/190 (4%)
Query: 49 EVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMR 108
E +L+ ++ + S+IGKGG+++ + ET A+IK+ + + ++ ISARE E
Sbjct: 283 EFFIRLVSPVENIASVIGKGGALINQLRQETRATIKVDSSRTEGNDCLITISAREVFEDA 342
Query: 109 HSPAQDAVMRVHSRIAEIGFEPGQAVVA---RLLVHSQQIGCLLGRGGHIVSEMRRATGA 165
+SP +AVMR+ + ++ E +V+ RLLV S +IGC+LG+GG I++EMRR T A
Sbjct: 343 YSPTIEAVMRLQPKCSD-KVERDSGLVSFTTRLLVPSSRIGCILGKGGAIITEMRRMTKA 401
Query: 166 SIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKRPGPNNGHSYL 225
+IR+ K+ P+ S DE+VQ+ G ++AL ITSRLR +F R G + + +
Sbjct: 402 NIRILGKENLPKVASDDDEMVQISGELDVAKEALIQITSRLRANVF--DREGAVS--ALM 457
Query: 226 PPFPEMPPPP 235
P P +P P
Sbjct: 458 PVLPYVPVAP 467
Score = 43.1 bits (100), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 48/84 (57%), Gaps = 11/84 (13%)
Query: 47 EEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSE 106
E++V KLL D++G ++G+GG IV+ ++ETGA I+I ++R + + A + E
Sbjct: 144 EKQVTAKLLVPSDQIGCILGRGGQIVQNIRSETGAQIRIV------KDRNMPLCALNSDE 197
Query: 107 MRHSPAQ-----DAVMRVHSRIAE 125
+ + A++++ SR+ E
Sbjct: 198 LIQISGEVLIVKKALLQIASRLHE 221
>gi|356531744|ref|XP_003534436.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine
max]
Length = 540
Score = 134 bits (338), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 71/178 (39%), Positives = 104/178 (58%), Gaps = 14/178 (7%)
Query: 44 MFYEEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARE 103
+ ++ VF+ LC + K+GS+IG+GG IV+ + +T A I+I D LP +ER+V I +
Sbjct: 38 LITADDTVFRYLCPVRKIGSVIGRGGDIVKQLRADTKAKIRIGDALPGCDERVVTIHS-S 96
Query: 104 NSEMRH--------SPAQDAVMRVHSRIAEIGFEPGQA-----VVARLLVHSQQIGCLLG 150
+ E H SPAQDA+ RVH R+ + V A+LLV S QIGC++G
Sbjct: 97 SEETNHFDETDDLVSPAQDALFRVHQRVIAEDAREDEDEERNHVTAKLLVPSDQIGCVIG 156
Query: 151 RGGHIVSEMRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRE 208
+GG IV +R TGA IR+ D+ P C DE+VQ+ G V+ ALF I +++R+
Sbjct: 157 KGGQIVQNIRSETGAQIRILKDDRLPPCALSTDELVQISGEAAVVKKALFQIAAQIRD 214
Score = 128 bits (322), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 67/187 (35%), Positives = 108/187 (57%), Gaps = 8/187 (4%)
Query: 49 EVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMR 108
E + +C +G +IGKGG+I+ + ++GA+IK+ + ++ +++IS +E E
Sbjct: 278 EFSVRFVCPTGNIGGVIGKGGAIINQIRQDSGATIKVDSSATEGDDCLIIISTKEFFEDS 337
Query: 109 HSPAQDAVMRVHSRIAEIGFEPGQAVVA---RLLVHSQQIGCLLGRGGHIVSEMRRATGA 165
SP +A +R+ R +E E +V+ RLLV + +IGCL+G+GG IV+EMRR T A
Sbjct: 338 FSPTIEAAVRLQPRCSE-KVERDSGIVSFTTRLLVPTSRIGCLIGKGGTIVTEMRRLTKA 396
Query: 166 SIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKRPGPNNGHSYL 225
+IR+ KD P+ S DE+VQ+ G+ +DAL +RLR +F +R +L
Sbjct: 397 NIRILSKDNLPKIASEDDEMVQISGDLDVAKDALVQALTRLRANLFDKERAVSG----FL 452
Query: 226 PPFPEMP 232
P P +P
Sbjct: 453 PVLPYLP 459
>gi|326517934|dbj|BAK07219.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 632
Score = 134 bits (338), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 107/372 (28%), Positives = 171/372 (45%), Gaps = 53/372 (14%)
Query: 49 EVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMR 108
E++ +++C DK+G +IGK G ++ + E+GA + + D D EE I+ +S+ E ++
Sbjct: 311 ELLLRVVCPGDKIGLVIGKAGMTIKNIRKESGARVDVDDAKNDKEESIITVSSTEATDDV 370
Query: 109 HSPAQDAVMRVHSRIAEIGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIR 168
S A +AV+ + ++I + E + RLLV IGCL+G+GG I+++MR + A I
Sbjct: 371 KSAAVEAVLLLQAKIND---ETEDRMHLRLLVPGNVIGCLIGKGGSIINDMRNKSKAIIH 427
Query: 169 VFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKRPGPNNGHSYLPPF 228
+ K PR S DE+V+V G ++DAL I RLRE + N+G
Sbjct: 428 I-SKGTKPRKASSSDELVEVFGEVDKLRDALVQIVLRLREDVLKDSVGRQNSGKDGKLTV 486
Query: 229 PEMPPPPFRPRHNPASPGSYPSPVGPFHSMDRGMGPSQPFDHQAA-FSHGMDPMVPPNSD 287
P S S+P P P+ Q H V S+
Sbjct: 487 ATT---------EPVSSSSFPMPA------------LLPYSQQITPLRHDQRGEVERGSN 525
Query: 288 RIPFPYGSERPGHGPTFDRPPSPRSWTPQGVGGGDPRGFDASSGFTPRNRPVESGNHAAI 347
FP S G+ SPR G G +S P R V
Sbjct: 526 --VFPRSSLYHGY--------SPREAVDDGF------GVRSSYTSKPYGRRVPD------ 563
Query: 348 LTSTTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATEGVVMVSGTSDQM 407
+E+ IP ++ V G++ +NL +IR+ISGA++ + + K + V + GT +Q
Sbjct: 564 -----MEMFIPSSGLSKVMGKHGTNLDNIRKISGADIEILESKSSRHDHVAHIFGTPEQW 618
Query: 408 RAAQSLIHAFIL 419
++A++LI AFI+
Sbjct: 619 QSAENLIKAFIM 630
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 92/392 (23%), Positives = 155/392 (39%), Gaps = 67/392 (17%)
Query: 48 EEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISA--RENS 105
E VV+++LC +GS+IGKGG ++ + + +T A +K+ D P +++R++++ +
Sbjct: 36 ELVVYRILCPDKVIGSVIGKGGKVINSIRQQTNAKVKVVDPYPGADKRVILVYCYVKHRD 95
Query: 106 EMRHS-------------PAQDAVMRVHSRI--AEIGFEPGQAVVARLLVHSQQIGCLLG 150
M AQ+A+++VH I A + A +LV + Q ++G
Sbjct: 96 VMLSDINADDDDDREPVCAAQNALLKVHDAIVGALAVTDDSDDKEANILVPASQAASVIG 155
Query: 151 RGGHIVSEMRRATGASIRVFPKDQAP---RCGSPHDEIVQVIGNYHSVQDALFHITSRLR 207
+ G ++ ++R + + I+V PKD + C D VQ+ G+ +V+ ALF +++ +
Sbjct: 156 KSGSVIKKLRSVSKSFIKVKPKDPSDVTHSCAMSFDNFVQITGDARAVKKALFAVSTIMY 215
Query: 208 ETIFPMKRPGPNNGHSYLPPFPEMPPPPFRPRHNPASPGSYPSPVGPFHSMDRGMGPSQP 267
+ P K P E+PP P P P S V
Sbjct: 216 KC--PSKENIP-----LETSIDELPPTIILPSELPVYPASSLYSVS-------------- 254
Query: 268 FDHQAAFSHGMDPMVPPNSDRIPFPYGSERPGHGPTFDRPPSPRSWTPQGVGGGDPRGFD 327
D +P + + R H P F P GG P
Sbjct: 255 -----------DASMPSGHPSLSILGATSRGSHVPDF--------TVPIDTHGGLPIYQS 295
Query: 328 ASSGFTPRNRPVESGNHAAILTSTTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVN 387
N P SG + VV P + V G+ + +IR+ SGA V V+
Sbjct: 296 MVPAVPTYNTPKCSGE-------LLLRVVCPGDKIGLVIGKAGMTIKNIRKESGARVDVD 348
Query: 388 DPKPGATEGVVMVSGTSDQMRAAQSLIHAFIL 419
D K E ++ VS T + + A +L
Sbjct: 349 DAKNDKEESIITVSSTEATDDVKSAAVEAVLL 380
>gi|356568682|ref|XP_003552539.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine
max]
Length = 543
Score = 134 bits (338), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 71/178 (39%), Positives = 105/178 (58%), Gaps = 14/178 (7%)
Query: 44 MFYEEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARE 103
+ ++ VF+ LC + K+GS+IG+GG IV+ + +T A I+I D LP +ER+V I +
Sbjct: 38 LITADDTVFRYLCPVRKIGSVIGRGGDIVKQLRADTKAKIRIGDALPGCDERVVTIHS-S 96
Query: 104 NSEMRH--------SPAQDAVMRVHSRIAEIGFEPGQA-----VVARLLVHSQQIGCLLG 150
+ E H SPAQDA+ RVH R+ + V A+LLV S QIGC++G
Sbjct: 97 SEETNHFDETGDLVSPAQDALFRVHQRVIAEDAREDEDDERNHVTAKLLVPSDQIGCVIG 156
Query: 151 RGGHIVSEMRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRE 208
+GG IV +R TGA IR+ D+ P C +DE+VQ+ G V+ ALF I +++R+
Sbjct: 157 KGGQIVQNIRSETGAQIRILKDDRLPPCALSNDELVQISGEAAVVKKALFQIAAQIRD 214
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 66/187 (35%), Positives = 108/187 (57%), Gaps = 8/187 (4%)
Query: 49 EVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMR 108
E + +C +G +IGKGG+I+ + ++GA+IK+ + ++ +++IS +E E
Sbjct: 278 EFSVRFVCPTGNIGGVIGKGGAIINQIRQDSGATIKVDSSATEGDDCLIIISMKEFFEDS 337
Query: 109 HSPAQDAVMRVHSRIAEIGFEPGQAVVA---RLLVHSQQIGCLLGRGGHIVSEMRRATGA 165
SP +A +R+ R +E E +V+ RLLV + +IGCL+G+GG IV+EMRR T A
Sbjct: 338 FSPTIEAAVRLQPRCSE-KVERDSGIVSFTTRLLVPTSRIGCLIGKGGTIVTEMRRLTKA 396
Query: 166 SIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKRPGPNNGHSYL 225
+IR+ K+ P+ S DE+VQ+ G+ +DAL +RLR +F +R +L
Sbjct: 397 NIRILSKENLPKIASEDDEMVQISGDLDVAKDALVQALTRLRANLFDKERAVSG----FL 452
Query: 226 PPFPEMP 232
P P +P
Sbjct: 453 PVLPYLP 459
>gi|30681758|ref|NP_850026.1| RNA-binding KH domain-containing protein [Arabidopsis thaliana]
gi|330252232|gb|AEC07326.1| RNA-binding KH domain-containing protein [Arabidopsis thaliana]
Length = 632
Score = 134 bits (337), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 116/385 (30%), Positives = 169/385 (43%), Gaps = 42/385 (10%)
Query: 47 EEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSE 106
E +VVFK++ G +IGK G+I+R QNETGASI + L S ER+V +SAREN E
Sbjct: 274 ERKVVFKIIFTSVVAGGIIGKQGTIIRALQNETGASISVGAPLKVSGERVVTVSARENLE 333
Query: 107 MRHSPAQDAVMRVHSRIAEI--------GFEPGQAVVARLLVHSQQIGCLLGRGGHIVSE 158
R+S AQ+A+ V +R EI G G V +LLV S G G E
Sbjct: 334 SRYSHAQNALALVFARSVEIDVEKGLRPGLHNGAIVKTKLLVPSHFANSFNGNGNR---E 390
Query: 159 MRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKRPGP 218
ATGA + + +Q S ++ ++++ G Y VQ AL H++S+LRE + P K G
Sbjct: 391 AIIATGADVHISVGNQVLEWISENEVVIEIKGEYSHVQKALTHVSSKLRENLLPKKVLGE 450
Query: 219 NNGHS---YLPPFPEMPPPPFRPRHNPASPGS--YPSPVGPFHSMDRGMGPSQPFDHQAA 273
Y +P AS G S P M R G +
Sbjct: 451 MRARVSNPYESAGGRSQIYNLQPSQQDASRGDSLSVSAAVPDLKMVRS-GAEVLKSNSVM 509
Query: 274 FSHGMDPMVPPNSDRIPFPYGSERPGHGPTFDRPPSPRSWTPQGVGGGDPRGFDASSGFT 333
+ + + N +P E G Q GD S
Sbjct: 510 HTEVLKEVDELNDFTLPQSLLEEDLTQGMK----------QLQMSSNGDV------SSLP 553
Query: 334 PRNRPVESGNHAAILTSTTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGA 393
PR++ V + T+E+ + + + +YG + + + +++QISGANV V DP
Sbjct: 554 PRSKGVS-------VRKITLELAVEKDALGSLYGRDGTGVDNLQQISGANVDVKDPT--G 604
Query: 394 TEGVVMVSGTSDQMRAAQSLIHAFI 418
TE V++SG +Q R A SLI + +
Sbjct: 605 TEATVLISGNPEQARTAMSLIESIL 629
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/191 (29%), Positives = 87/191 (45%), Gaps = 34/191 (17%)
Query: 48 EEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVI--SARENS 105
+E +++CH +G +IG G +V + ETG I + S+ +V I S N
Sbjct: 23 DETAIRVVCHASVIGGIIGSNGYVVSKLRRETGTKIHCESPVNGSDHWVVFIVGSTAVNQ 82
Query: 106 EM--------------------RHSPAQDAVMRVHSR-IAEIGFEPGQAVV--------A 136
+ S AQ A++RV R + + G VV
Sbjct: 83 SILLTDRVGEFSGGEHEDWVTCEVSAAQTALIRVLERSWVVLAAKDGGGVVDGEDEEAYC 142
Query: 137 RLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQ 196
+L QIG +LG GG V MRR +GA IRV P P CG+ +DE++Q+ G+ +V+
Sbjct: 143 GILADRNQIGAVLGLGGKNVEWMRRNSGAMIRVLP---PPICGTKNDELIQITGDVLAVK 199
Query: 197 DALFHITSRLR 207
AL ++S ++
Sbjct: 200 KALVMVSSYIQ 210
>gi|449527609|ref|XP_004170802.1| PREDICTED: KH domain-containing protein At4g18375-like [Cucumis
sativus]
Length = 546
Score = 134 bits (337), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 117/437 (26%), Positives = 198/437 (45%), Gaps = 55/437 (12%)
Query: 19 GYAPGYHSRGYSSGPGHETVGGRNR---------MFYEEEVVFKLLCHLDKVGSLIGKGG 69
G Y R +S E G + R + E+ V++ LC + K+GS+IG+GG
Sbjct: 3 GQRNSYGKRNHSQSDYSENGGNKRRSHGEDRDQFVIDSEDTVYRYLCPVKKIGSVIGRGG 62
Query: 70 SIVRTFQNETGASIKIADILPDSEERIVVI-------SARENSEMRHSPAQDAVMRVHSR 122
IV+ + +T + I+I + +P S+ER++ I ++ E S SPAQ+A+ ++H R
Sbjct: 63 EIVKQLRIDTKSKIRIGETVPGSDERVITIYSASNETNSLEESSDYVSPAQEALFKIHDR 122
Query: 123 IAEIGFEP------GQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAP 176
+ + G V ARLLV S QIGC++G+GG IV +R TGA +R+ D P
Sbjct: 123 VVADDYMDEDSEGGGHQVTARLLVPSDQIGCIIGKGGQIVQNIRTETGAQVRILKDDHLP 182
Query: 177 RCGSPHDEIVQVIGNYHSVQDALFHITSRLRET------IFPMKRPGP-NNGHSYLPPFP 229
RC DE+VQ+ G V+ AL+ I SRL + + PG ++G S + P
Sbjct: 183 RCALSSDELVQISGEPLIVKKALYQIASRLHDNPSRSQHLLASAIPGVYSSGGSLMAPTH 242
Query: 230 EMPPPPFRPRHNPASPGSYPSPVGPFHSMD---RGMGPSQPFDHQAAFSHGMDPMVPPNS 286
P P +P G Y +P S + R + P++ + + +
Sbjct: 243 GAPIMGLAPLVSPY--GGYKAPREDLSSKEFSLRLICPTENIGGVIGKGGAIINQIRQET 300
Query: 287 DRIPFPYGSERPGHGPTFD---RPPSPRSWTPQGVGGGDPRGFDASSGFTPR-NRPVESG 342
S G + + S++P +A+ PR + VE
Sbjct: 301 KAAIKVDSSATEGDDCLINISSKEFFEDSYSPT---------LEAALRLQPRCSEKVE-- 349
Query: 343 NHAAILTSTTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVV----NDPKPGATEGVV 398
+ I++ TT +++P + + G+ + ++ +R+++ AN+ + N PK A E
Sbjct: 350 RDSGIISFTT-RLLVPTSRIGCLIGKGGAIITELRRLTKANIRILSKENLPKV-ALEDDE 407
Query: 399 MVSGTSDQMRAAQSLIH 415
MV + D A ++L+H
Sbjct: 408 MVQISGDLDVAKEALVH 424
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 66/188 (35%), Positives = 113/188 (60%), Gaps = 8/188 (4%)
Query: 48 EEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEM 107
+E +L+C + +G +IGKGG+I+ + ET A+IK+ + ++ ++ IS++E E
Sbjct: 269 KEFSLRLICPTENIGGVIGKGGAIINQIRQETKAAIKVDSSATEGDDCLINISSKEFFED 328
Query: 108 RHSPAQDAVMRVHSRIAEIGFEPGQAVVA---RLLVHSQQIGCLLGRGGHIVSEMRRATG 164
+SP +A +R+ R +E E +++ RLLV + +IGCL+G+GG I++E+RR T
Sbjct: 329 SYSPTLEAALRLQPRCSE-KVERDSGIISFTTRLLVPTSRIGCLIGKGGAIITELRRLTK 387
Query: 165 ASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKRPGPNNGHSY 224
A+IR+ K+ P+ DE+VQ+ G+ ++AL HI +RLR +F R G + +
Sbjct: 388 ANIRILSKENLPKVALEDDEMVQISGDLDVAKEALVHIVTRLRANLFD--REGALS--AV 443
Query: 225 LPPFPEMP 232
LP P +P
Sbjct: 444 LPVLPYLP 451
>gi|449447377|ref|XP_004141445.1| PREDICTED: KH domain-containing protein At4g18375-like [Cucumis
sativus]
Length = 545
Score = 134 bits (337), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 117/437 (26%), Positives = 198/437 (45%), Gaps = 55/437 (12%)
Query: 19 GYAPGYHSRGYSSGPGHETVGGRNR---------MFYEEEVVFKLLCHLDKVGSLIGKGG 69
G Y R +S E G + R + E+ V++ LC + K+GS+IG+GG
Sbjct: 3 GQRNSYGKRNHSQSDYSENGGNKRRSHGEDRDQFVIDSEDTVYRYLCPVKKIGSVIGRGG 62
Query: 70 SIVRTFQNETGASIKIADILPDSEERIVVI-------SARENSEMRHSPAQDAVMRVHSR 122
IV+ + +T + I+I + +P S+ER++ I ++ E S SPAQ+A+ ++H R
Sbjct: 63 EIVKQLRIDTKSKIRIGETVPGSDERVITIYSASNETNSLEESSDYVSPAQEALFKIHDR 122
Query: 123 IAEIGFEP------GQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAP 176
+ + G V ARLLV S QIGC++G+GG IV +R TGA +R+ D P
Sbjct: 123 VVADDYMDEDSEGGGHQVTARLLVPSDQIGCIIGKGGQIVQNIRTETGAQVRILKDDHLP 182
Query: 177 RCGSPHDEIVQVIGNYHSVQDALFHITSRLRET------IFPMKRPGP-NNGHSYLPPFP 229
RC DE+VQ+ G V+ AL+ I SRL + + PG ++G S + P
Sbjct: 183 RCALSSDELVQISGEPLIVKKALYQIASRLHDNPSRSQHLLASAIPGVYSSGGSLMAPTH 242
Query: 230 EMPPPPFRPRHNPASPGSYPSPVGPFHSMD---RGMGPSQPFDHQAAFSHGMDPMVPPNS 286
P P +P G Y +P S + R + P++ + + +
Sbjct: 243 GAPIMGLAPLVSPY--GGYKAPREDLSSKEFSLRLICPTENIGGVIGKGGAIINQIRQET 300
Query: 287 DRIPFPYGSERPGHGPTFD---RPPSPRSWTPQGVGGGDPRGFDASSGFTPR-NRPVESG 342
S G + + S++P +A+ PR + VE
Sbjct: 301 KAAIKVDSSATEGDDCLINISSKEFFEDSYSPT---------LEAALRLQPRCSEKVE-- 349
Query: 343 NHAAILTSTTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVV----NDPKPGATEGVV 398
+ I++ TT +++P + + G+ + ++ +R+++ AN+ + N PK A E
Sbjct: 350 RDSGIISFTT-RLLVPTSRIGCLIGKGGAIITELRRLTKANIRILSKENLPKV-ALEDDE 407
Query: 399 MVSGTSDQMRAAQSLIH 415
MV + D A ++L+H
Sbjct: 408 MVQISGDLDVAKEALVH 424
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 66/188 (35%), Positives = 113/188 (60%), Gaps = 8/188 (4%)
Query: 48 EEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEM 107
+E +L+C + +G +IGKGG+I+ + ET A+IK+ + ++ ++ IS++E E
Sbjct: 269 KEFSLRLICPTENIGGVIGKGGAIINQIRQETKAAIKVDSSATEGDDCLINISSKEFFED 328
Query: 108 RHSPAQDAVMRVHSRIAEIGFEPGQAVVA---RLLVHSQQIGCLLGRGGHIVSEMRRATG 164
+SP +A +R+ R +E E +++ RLLV + +IGCL+G+GG I++E+RR T
Sbjct: 329 SYSPTLEAALRLQPRCSE-KVERDSGIISFTTRLLVPTSRIGCLIGKGGAIITELRRLTK 387
Query: 165 ASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKRPGPNNGHSY 224
A+IR+ K+ P+ DE+VQ+ G+ ++AL HI +RLR +F R G + +
Sbjct: 388 ANIRILSKENLPKVALEDDEMVQISGDLDVAKEALVHIVTRLRANLFD--REGALS--AV 443
Query: 225 LPPFPEMP 232
LP P +P
Sbjct: 444 LPVLPYLP 451
>gi|414870926|tpg|DAA49483.1| TPA: hypothetical protein ZEAMMB73_398324 [Zea mays]
Length = 541
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 82/243 (33%), Positives = 126/243 (51%), Gaps = 53/243 (21%)
Query: 44 MFYE-EEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVI--- 99
MF E E ++++LC + K+GS++G+GG IV+ + ET A I++AD +P ++ER+++I
Sbjct: 36 MFSEPIETIYRILCPVKKIGSVLGRGGDIVKALREETKAKIRVADSIPGADERVIIIFNY 95
Query: 100 ----------SARENSE-----MRHSPAQDAVMRVHSRIA--EI--------GFEPGQAV 134
+ +NS+ H AQDA++++H +I EI E V
Sbjct: 96 QNEPEPTDEAAEEKNSDGLGNFKSHCFAQDALLKIHDKIVSDEIHDEVANDEKSESADDV 155
Query: 135 VARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHS 194
AR+LV Q+GCLLG+GG I+ ++R TGA IRV P + P+C DE+VQ+ G
Sbjct: 156 TARILVQGNQVGCLLGKGGSIIQQLRSNTGAGIRVLPSENLPQCALKSDELVQISGAPSL 215
Query: 195 VQDALFHITSRL----RETIFPM----------KRPGPNNGHSY----------LPPFPE 230
V+ AL+ I++RL R+ P+ KR P H Y PP P
Sbjct: 216 VRKALYEISTRLHQHPRKENRPLEEIIDASTQRKRESPTLQHEYSMLPHLHSDHTPPIPL 275
Query: 231 MPP 233
+ P
Sbjct: 276 LDP 278
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 59/153 (38%), Positives = 94/153 (61%), Gaps = 7/153 (4%)
Query: 48 EEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPD-SEERIVVISARENSE 106
EE ++LC + +GS+IGK G+ VR + +TGA IK+ +I D S ER+++IS+ E
Sbjct: 291 EEFSIRILCASELIGSVIGKSGANVRRVEQQTGARIKVQEIDKDASGERLIIISSNEIPA 350
Query: 107 MRHSPAQDAVMRVHSRIAEIGFEPGQA--VVARLLVHSQQIGCLLGRGGHIVSEMRRATG 164
SPA +A++ +H +++ P + RL+V S ++GC++G GG ++++MRR TG
Sbjct: 351 EPISPAIEALILLHDKVSA----PSEKHHSSTRLVVPSSKVGCIIGEGGKVITDMRRRTG 406
Query: 165 ASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQD 197
A IRV+ K P+ S DE+VQ G H +D
Sbjct: 407 AEIRVYSKADKPKYLSFDDELVQAAGQIHGRED 439
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 44/68 (64%)
Query: 351 TTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATEGVVMVSGTSDQMRAA 410
+TIE+ IP + + G NL+ IRQ+SGA + +++ G++E VV + GT DQ +AA
Sbjct: 452 STIELRIPNSSLGSIVGAGGVNLAEIRQVSGARLRLHEAHAGSSESVVEIQGTLDQAKAA 511
Query: 411 QSLIHAFI 418
QSL+ FI
Sbjct: 512 QSLLQGFI 519
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 32/51 (62%)
Query: 35 HETVGGRNRMFYEEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKI 85
H+ V + ++V ++L ++VG L+GKGGSI++ ++ TGA I++
Sbjct: 140 HDEVANDEKSESADDVTARILVQGNQVGCLLGKGGSIIQQLRSNTGAGIRV 190
>gi|115482708|ref|NP_001064947.1| Os10g0495000 [Oryza sativa Japonica Group]
gi|22128716|gb|AAM92828.1| putative RNA-binding protein [Oryza sativa Japonica Group]
gi|110289325|gb|ABB47821.2| KH domain containing protein, expressed [Oryza sativa Japonica
Group]
gi|113639556|dbj|BAF26861.1| Os10g0495000 [Oryza sativa Japonica Group]
gi|215694845|dbj|BAG90036.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 762
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 68/185 (36%), Positives = 114/185 (61%), Gaps = 25/185 (13%)
Query: 49 EVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVI--------S 100
E ++++LC + K+GS++G+GG IV+ ++ T A I++AD +P ++ER+++I
Sbjct: 45 ETIYRILCPVKKIGSVLGRGGDIVKALRDTTKAKIRVADSIPGADERVIIIFNYSSQTEE 104
Query: 101 AREN------SEMR-HSPAQDAVMRVHSRIAE-------IGFEPGQ---AVVARLLVHSQ 143
A +N +M+ H AQDA++++H +IA I E + V+AR+LV
Sbjct: 105 AAQNISTDGFEDMKPHCFAQDALLKIHDKIAADEDLHAGIVHEKSENVDDVIARILVPGN 164
Query: 144 QIGCLLGRGGHIVSEMRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHIT 203
Q+GCLLG+GG I+ ++R TGA IRV P + P+C DE+VQ+ G+ V+ AL+ I+
Sbjct: 165 QVGCLLGKGGSIIQQLRNDTGAGIRVLPSENLPQCALKSDELVQISGSSSLVRKALYEIS 224
Query: 204 SRLRE 208
+RL +
Sbjct: 225 TRLHQ 229
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 61/161 (37%), Positives = 101/161 (62%), Gaps = 3/161 (1%)
Query: 48 EEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPD-SEERIVVISARENSE 106
EE K+LC + +G +IGK G VR + +TGA +++ ++ + SEER++V+S++E +
Sbjct: 293 EEFSIKILCASEHIGQVIGKSGGNVRQVEQQTGACVQVKEVGKNASEERLIVVSSQEIPD 352
Query: 107 MRHSPAQDAVMRVHSRIAEIGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGAS 166
SP +A++ +HS+++ + + RL+V S ++GC++G GG +++EMRR TGA
Sbjct: 353 DPVSPTIEALILLHSKVSTLA--ENHHLTTRLVVPSNKVGCIIGEGGKVITEMRRRTGAE 410
Query: 167 IRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLR 207
IRV+ K P+ S +E+VQV G + AL I SRLR
Sbjct: 411 IRVYSKADKPKYLSFDEELVQVAGLPAIARGALTEIASRLR 451
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 44/67 (65%)
Query: 352 TIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATEGVVMVSGTSDQMRAAQ 411
++E IP Y+ V G NL+ IRQISGA V +++ PG++E +V + G DQ++AAQ
Sbjct: 677 SVEFRIPNSYLESVIGAGGVNLAEIRQISGARVKLHEAHPGSSESIVEIQGIPDQVKAAQ 736
Query: 412 SLIHAFI 418
SL+ FI
Sbjct: 737 SLLQGFI 743
Score = 42.0 bits (97), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 30/38 (78%)
Query: 48 EEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKI 85
++V+ ++L ++VG L+GKGGSI++ +N+TGA I++
Sbjct: 153 DDVIARILVPGNQVGCLLGKGGSIIQQLRNDTGAGIRV 190
>gi|357485457|ref|XP_003613016.1| Poly(rC)-binding protein [Medicago truncatula]
gi|355514351|gb|AES95974.1| Poly(rC)-binding protein [Medicago truncatula]
Length = 596
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 80/167 (47%), Positives = 106/167 (63%), Gaps = 9/167 (5%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMRH 109
VVF+LLC + GS+IGK GSIVRTF+ TGASI A L EERIV ISA EN E +
Sbjct: 275 VVFRLLCSNNVAGSVIGKKGSIVRTFEIRTGASIVFAPPLGQYEERIVTISAFENLESSN 334
Query: 110 SPAQDAVMRVHSRIAEI----GFEPGQA----VVARLLVHSQQIGCLLGRGGHIVSEMRR 161
SPAQDAV+ V +RIAE GF+P A V ARLL+ + + L G G ++SE+R+
Sbjct: 335 SPAQDAVILVFTRIAEDHIRNGFQPATAVESPVTARLLITTSTLHLLTGNEGQVISELRQ 394
Query: 162 ATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRE 208
+GA I++ + P S +D +VQ+ G Y V++AL ITS +R+
Sbjct: 395 VSGADIQLLHGEPIPN-ASDNDVVVQITGGYRCVENALRKITSIIRD 440
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 58/171 (33%), Positives = 99/171 (57%), Gaps = 14/171 (8%)
Query: 49 EVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVI----SARE- 103
++ F+L+CH VG LIG GSIV + ETG I D + +++R++++ S R+
Sbjct: 38 QIAFRLVCHSSTVGGLIGSSGSIVSQLRRETGCKIHCEDAVVGTDDRVILVIGSMSDRKG 97
Query: 104 ----NSEMRHSPAQDAVMRVHSRIAEIGFEPG--QAVVARLLVHSQQIGCLLGRGGHIVS 157
+ EM S AQ+ V+RV R+ + E G V +LL HS Q+G ++G+GG +S
Sbjct: 98 IVLGDREMEVSNAQEGVVRVFDRVWGLESEKGGNGEVYGKLLAHSSQVGAIVGKGGKNIS 157
Query: 158 EMRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRE 208
+R +G++IRV P AP C + +E++ + G +V+ AL +++ L++
Sbjct: 158 NIRNNSGSNIRVCP---APHCAAKDEELILITGESLAVKKALIYVSYCLQD 205
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 96/332 (28%), Positives = 137/332 (41%), Gaps = 57/332 (17%)
Query: 131 GQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAPRCGSPHDEIVQV-- 188
G AVV RLL + G ++G+ G IV TGASI VF AP G + IV +
Sbjct: 272 GHAVVFRLLCSNNVAGSVIGKKGSIVRTFEIRTGASI-VF----APPLGQYEERIVTISA 326
Query: 189 IGNYHS----VQDALF---------HI--------------TSRLRETIFPMKRPGPNNG 221
N S QDA+ HI T+RL T + N G
Sbjct: 327 FENLESSNSPAQDAVILVFTRIAEDHIRNGFQPATAVESPVTARLLITTSTLHLLTGNEG 386
Query: 222 HSYLPPFPEMPPPPFRPRHNPASPGSYPSPV-----GPFHSMDRGMGP------SQPFDH 270
+ ++ + H P + + V G + ++ + P +
Sbjct: 387 Q-VISELRQVSGADIQLLHGEPIPNASDNDVVVQITGGYRCVENALRKITSIIRDNPLTN 445
Query: 271 QAAFSHGMDPMVPPNSDRIPFPYGSERPGHGPTFDRPPSPRSWTPQGVGGGDPRGF-DAS 329
+ + P P N D + + + + P F R P PQ G + +
Sbjct: 446 ELLAEAKIKPSFPLNKDTVRSKFITRKKSSFP-FARVP------PQNAGVYQAKKVTENG 498
Query: 330 SGFTPRNRPVE--SGNHAAILTSTTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVN 387
T VE GN A +T+TT+E+++ + VYGE+ NL IRQISGA+V V
Sbjct: 499 ESHTNLIENVEPGRGNIVATVTNTTVEIIVSEHVFGSVYGEDGGNLDRIRQISGADVTVF 558
Query: 388 DP-KPGATEGVVMVSGTSDQMRAAQSLIHAFI 418
DP G + G V++SGT DQ AAQSL+ AFI
Sbjct: 559 DPSSTGTSGGKVVISGTPDQTFAAQSLLQAFI 590
>gi|125532489|gb|EAY79054.1| hypothetical protein OsI_34164 [Oryza sativa Indica Group]
gi|125575260|gb|EAZ16544.1| hypothetical protein OsJ_32017 [Oryza sativa Japonica Group]
Length = 769
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 68/185 (36%), Positives = 114/185 (61%), Gaps = 25/185 (13%)
Query: 49 EVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVI--------S 100
E ++++LC + K+GS++G+GG IV+ ++ T A I++AD +P ++ER+++I
Sbjct: 52 ETIYRILCPVKKIGSVLGRGGDIVKALRDTTKAKIRVADSIPGADERVIIIFNYSSQTEE 111
Query: 101 AREN------SEMR-HSPAQDAVMRVHSRIAE-------IGFEPGQ---AVVARLLVHSQ 143
A +N +M+ H AQDA++++H +IA I E + V+AR+LV
Sbjct: 112 AAQNISTDGFEDMKPHCFAQDALLKIHDKIAADEDLHAGIVHEKSENVDDVIARILVPGN 171
Query: 144 QIGCLLGRGGHIVSEMRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHIT 203
Q+GCLLG+GG I+ ++R TGA IRV P + P+C DE+VQ+ G+ V+ AL+ I+
Sbjct: 172 QVGCLLGKGGSIIQQLRNDTGAGIRVLPSENLPQCALKSDELVQISGSSSLVRKALYEIS 231
Query: 204 SRLRE 208
+RL +
Sbjct: 232 TRLHQ 236
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 61/161 (37%), Positives = 101/161 (62%), Gaps = 3/161 (1%)
Query: 48 EEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPD-SEERIVVISARENSE 106
EE K+LC + +G +IGK G VR + +TGA +++ ++ + SEER++V+S++E +
Sbjct: 300 EEFSIKILCASEHIGQVIGKSGGNVRQVEQQTGACVQVKEVGKNASEERLIVVSSQEIPD 359
Query: 107 MRHSPAQDAVMRVHSRIAEIGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGAS 166
SP +A++ +HS+++ + + RL+V S ++GC++G GG +++EMRR TGA
Sbjct: 360 DPVSPTIEALILLHSKVSTLA--ENHHLTTRLVVPSNKVGCIIGEGGKVITEMRRRTGAE 417
Query: 167 IRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLR 207
IRV+ K P+ S +E+VQV G + AL I SRLR
Sbjct: 418 IRVYSKADKPKYLSFDEELVQVAGLPAIARGALTEIASRLR 458
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 44/67 (65%)
Query: 352 TIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATEGVVMVSGTSDQMRAAQ 411
++E IP Y+ V G NL+ IRQISGA V +++ PG++E +V + G DQ++AAQ
Sbjct: 684 SVEFRIPNSYLESVIGAGGVNLAEIRQISGARVKLHEAHPGSSESIVEIQGIPDQVKAAQ 743
Query: 412 SLIHAFI 418
SL+ FI
Sbjct: 744 SLLQGFI 750
Score = 42.0 bits (97), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 30/38 (78%)
Query: 48 EEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKI 85
++V+ ++L ++VG L+GKGGSI++ +N+TGA I++
Sbjct: 160 DDVIARILVPGNQVGCLLGKGGSIIQQLRNDTGAGIRV 197
>gi|110289326|gb|AAP54423.2| KH domain containing protein, expressed [Oryza sativa Japonica
Group]
Length = 677
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 68/185 (36%), Positives = 114/185 (61%), Gaps = 25/185 (13%)
Query: 49 EVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVI--------S 100
E ++++LC + K+GS++G+GG IV+ ++ T A I++AD +P ++ER+++I
Sbjct: 45 ETIYRILCPVKKIGSVLGRGGDIVKALRDTTKAKIRVADSIPGADERVIIIFNYSSQTEE 104
Query: 101 AREN------SEMR-HSPAQDAVMRVHSRIAE-------IGFEPGQ---AVVARLLVHSQ 143
A +N +M+ H AQDA++++H +IA I E + V+AR+LV
Sbjct: 105 AAQNISTDGFEDMKPHCFAQDALLKIHDKIAADEDLHAGIVHEKSENVDDVIARILVPGN 164
Query: 144 QIGCLLGRGGHIVSEMRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHIT 203
Q+GCLLG+GG I+ ++R TGA IRV P + P+C DE+VQ+ G+ V+ AL+ I+
Sbjct: 165 QVGCLLGKGGSIIQQLRNDTGAGIRVLPSENLPQCALKSDELVQISGSSSLVRKALYEIS 224
Query: 204 SRLRE 208
+RL +
Sbjct: 225 TRLHQ 229
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 61/161 (37%), Positives = 101/161 (62%), Gaps = 3/161 (1%)
Query: 48 EEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPD-SEERIVVISARENSE 106
EE K+LC + +G +IGK G VR + +TGA +++ ++ + SEER++V+S++E +
Sbjct: 293 EEFSIKILCASEHIGQVIGKSGGNVRQVEQQTGACVQVKEVGKNASEERLIVVSSQEIPD 352
Query: 107 MRHSPAQDAVMRVHSRIAEIGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGAS 166
SP +A++ +HS+++ + + RL+V S ++GC++G GG +++EMRR TGA
Sbjct: 353 DPVSPTIEALILLHSKVSTLA--ENHHLTTRLVVPSNKVGCIIGEGGKVITEMRRRTGAE 410
Query: 167 IRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLR 207
IRV+ K P+ S +E+VQV G + AL I SRLR
Sbjct: 411 IRVYSKADKPKYLSFDEELVQVAGLPAIARGALTEIASRLR 451
Score = 41.6 bits (96), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 30/38 (78%)
Query: 48 EEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKI 85
++V+ ++L ++VG L+GKGGSI++ +N+TGA I++
Sbjct: 153 DDVIARILVPGNQVGCLLGKGGSIIQQLRNDTGAGIRV 190
>gi|356529691|ref|XP_003533422.1| PREDICTED: poly(rC)-binding protein 3-like [Glycine max]
Length = 611
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 77/174 (44%), Positives = 105/174 (60%), Gaps = 8/174 (4%)
Query: 47 EEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSE 106
E EVVF+LLC + GS+IGK G+IVR +++TGASI A L + ERIV ISA E+ E
Sbjct: 288 EHEVVFRLLCSNNVAGSVIGKRGAIVRALESKTGASIIFAAPLSEHAERIVTISAIESLE 347
Query: 107 MRHSPAQDAVMRVHSRIAE----IGFEPGQA----VVARLLVHSQQIGCLLGRGGHIVSE 158
+SPAQDAV+ V +RI E GF + V ARLLV + + G G ++ E
Sbjct: 348 SCNSPAQDAVILVFARIIEDHIGKGFLQVSSMESPVTARLLVATSTVNSWSGNEGQVILE 407
Query: 159 MRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFP 212
+R TGA I++ + P S D +VQ+ G Y VQ+AL+ ITSR+R+ + P
Sbjct: 408 LREVTGADIQILHGESVPNGASDDDVVVQITGEYRCVQNALYKITSRIRDNLSP 461
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 59/178 (33%), Positives = 98/178 (55%), Gaps = 21/178 (11%)
Query: 49 EVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISAR------ 102
++ F+L+CH VG LIG GSIV + ET I D L +E+R++++
Sbjct: 49 QIAFRLVCHASIVGGLIGSSGSIVSQLRRETACKIHCEDSLSSAEDRVILVIGSVSPRKG 108
Query: 103 ----ENSEMRHSPAQDAVMRVHSRI----AEIGFEPGQA----VVARLLVHSQQIGCLLG 150
+ E+ S AQ+A++RV R+ AE G +A V ++LL H+ QIG ++G
Sbjct: 109 LQLGDGGEVEVSSAQEAIVRVFERVWGLEAEKGVNSNRAVNSEVFSKLLAHTSQIGAVVG 168
Query: 151 RGGHIVSEMRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRE 208
+GG ++ +R +TGA IRV P P+C + +E+V + G +V+ AL ++ L++
Sbjct: 169 KGGKNITAIRNSTGAKIRVCP---PPQCATKDEELVLITGGILAVKKALISVSHCLQD 223
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 42/83 (50%), Positives = 54/83 (65%)
Query: 342 GNHAAILTSTTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATEGVVMVS 401
GN A +T+TT+E+++ + VYGE+ NL IRQISGA V V DP G + G V++S
Sbjct: 529 GNMFATVTNTTVEIIVSEHVFGSVYGEDGGNLDRIRQISGATVTVYDPSVGTSGGKVVIS 588
Query: 402 GTSDQMRAAQSLIHAFILCGVTS 424
GT DQ AAQSL+ AFI G S
Sbjct: 589 GTPDQTLAAQSLLQAFIQTGEVS 611
>gi|297807547|ref|XP_002871657.1| KH domain-containing protein [Arabidopsis lyrata subsp. lyrata]
gi|297317494|gb|EFH47916.1| KH domain-containing protein [Arabidopsis lyrata subsp. lyrata]
Length = 544
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 71/175 (40%), Positives = 102/175 (58%), Gaps = 13/175 (7%)
Query: 48 EEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVI-------S 100
++ VF+ LC + K+GS+IG+GG IV+ + +T + I+I + +P +ER++ I +
Sbjct: 42 DDTVFRYLCPVKKIGSVIGRGGEIVKQLRMDTRSKIRIGEAIPGCDERVITIYSPSDETN 101
Query: 101 ARENSEMRHSPAQDAVMRVHSRI------AEIGFEPGQAVVARLLVHSQQIGCLLGRGGH 154
A + E SPAQDA+ R+H R+ +E E Q V A+LLV S QIGC+LGRGG
Sbjct: 102 AFGDGEKVLSPAQDALFRIHDRVVADDAQSEDSSEGEQQVTAKLLVPSDQIGCILGRGGQ 161
Query: 155 IVSEMRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRET 209
IV +R TGA IR+ P C DE++Q+ G V+ AL I SRL E
Sbjct: 162 IVQNIRSETGAQIRIIKDRNMPLCALNSDELIQISGEVLIVKKALHQIASRLHEN 216
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 72/190 (37%), Positives = 113/190 (59%), Gaps = 8/190 (4%)
Query: 49 EVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMR 108
E +L+ ++ + S+IGKGG+++ + ET A+IK+ + + ++ ISARE E
Sbjct: 279 EFFIRLVSPVENIASVIGKGGALINQLRQETRATIKVDSSRTEGNDCLITISAREVFEDA 338
Query: 109 HSPAQDAVMRVHSRIAEIGFEPGQAVVA---RLLVHSQQIGCLLGRGGHIVSEMRRATGA 165
+SP +AVMR+ + +E E +V+ RLLV S +IGC+LG+GG I++EMRR T A
Sbjct: 339 YSPTIEAVMRLQPKCSE-KVERDSGLVSFTTRLLVPSSRIGCILGKGGAIITEMRRMTKA 397
Query: 166 SIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKRPGPNNGHSYL 225
+IR+ K+ P+ S DE+VQ+ G ++AL ITSRLR +F R G + + +
Sbjct: 398 NIRILGKENLPKVASDDDEMVQISGELDVAKEALIQITSRLRANVF--DREGAVS--ALM 453
Query: 226 PPFPEMPPPP 235
P P +P P
Sbjct: 454 PVLPYVPVAP 463
Score = 43.1 bits (100), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 29/39 (74%)
Query: 47 EEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKI 85
E++V KLL D++G ++G+GG IV+ ++ETGA I+I
Sbjct: 138 EQQVTAKLLVPSDQIGCILGRGGQIVQNIRSETGAQIRI 176
>gi|413953981|gb|AFW86630.1| hypothetical protein ZEAMMB73_253509 [Zea mays]
Length = 667
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 71/228 (31%), Positives = 125/228 (54%), Gaps = 6/228 (2%)
Query: 48 EEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEM 107
++++F++LC DKV +L+ I+ Q + G ++++DI+ S+ER+V+I++RE +
Sbjct: 340 DDIIFRILCPNDKVDNLVATNDGILEMLQADVGVDVRLSDIIAGSDERVVIITSREGPDH 399
Query: 108 RHSPAQDAVMRVHSRIAEIGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASI 167
PAQ+AV+ + + I ++G + + RLLV S +I C GR G + S+++R T A++
Sbjct: 400 ELFPAQEAVLHIQTHIVDLGPDKDNIITTRLLVPSSEIACFDGREGSL-SDIQRQTSANV 458
Query: 168 RVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIF-PMKRP---GPNNGHS 223
++ PK+ P C DE++Q++G + ++AL +T++LR ++ M P G N H
Sbjct: 459 QILPKEDLPLCALESDELIQIVGEISAARNALIQVTTKLRSFLYREMSGPIQVGNINVHG 518
Query: 224 YLPPFPEMPPPPFRPRHNPASPGSYPSPVGP-FHSMDRGMGPSQPFDH 270
+ P P P P S S + +HS D G S FD
Sbjct: 519 AISPVAGSPGGPNLGNDMPMSAYHQASQLATSWHSKDSGGSASGSFDQ 566
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/118 (38%), Positives = 67/118 (56%), Gaps = 17/118 (14%)
Query: 110 SPAQDAVMRVHSRIAEIGFEPGQ----------------AVVARLLVHSQQIGCLLGRGG 153
SPAQ+A++ VH RI E + G RL+V +GCLLG+GG
Sbjct: 151 SPAQEALLMVHRRILETDADDGDEDGEYGPRGKDSRDRGKTTTRLIVPKMHVGCLLGKGG 210
Query: 154 HIVSEMRRATGASIRVFPKDQ-APRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETI 210
I+ +MR T IR+ P+DQ PRC S +E+VQV+G+ + V+ A+ IT RL+E++
Sbjct: 211 KIIEQMRMETKTHIRILPRDQHTPRCVSLSEEVVQVVGDGNCVKKAVAIITDRLKESL 268
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 56/109 (51%), Gaps = 1/109 (0%)
Query: 312 SWTPQGVGGGDPRGFDASSGFTPRNRPVESGNHAA-ILTSTTIEVVIPQLYMAHVYGENN 370
SW + GG FD S R + A ++T +T+EVVIP +A +
Sbjct: 550 SWHSKDSGGSASGSFDQGSNIIDEIRQGATKRFAVPLVTRSTLEVVIPNSAVASLTMRAG 609
Query: 371 SNLSHIRQISGANVVVNDPKPGATEGVVMVSGTSDQMRAAQSLIHAFIL 419
S L+ I +ISGA V + + +P E VV +SGT +Q A++L+ FIL
Sbjct: 610 SKLAQISEISGATVTLAEDRPDILEKVVRISGTPEQASKAENLLQGFIL 658
>gi|413953982|gb|AFW86631.1| hypothetical protein ZEAMMB73_253509 [Zea mays]
Length = 581
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 71/228 (31%), Positives = 125/228 (54%), Gaps = 6/228 (2%)
Query: 48 EEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEM 107
++++F++LC DKV +L+ I+ Q + G ++++DI+ S+ER+V+I++RE +
Sbjct: 340 DDIIFRILCPNDKVDNLVATNDGILEMLQADVGVDVRLSDIIAGSDERVVIITSREGPDH 399
Query: 108 RHSPAQDAVMRVHSRIAEIGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASI 167
PAQ+AV+ + + I ++G + + RLLV S +I C GR G + S+++R T A++
Sbjct: 400 ELFPAQEAVLHIQTHIVDLGPDKDNIITTRLLVPSSEIACFDGREGSL-SDIQRQTSANV 458
Query: 168 RVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIF-PMKRP---GPNNGHS 223
++ PK+ P C DE++Q++G + ++AL +T++LR ++ M P G N H
Sbjct: 459 QILPKEDLPLCALESDELIQIVGEISAARNALIQVTTKLRSFLYREMSGPIQVGNINVHG 518
Query: 224 YLPPFPEMPPPPFRPRHNPASPGSYPSPVGP-FHSMDRGMGPSQPFDH 270
+ P P P P S S + +HS D G S FD
Sbjct: 519 AISPVAGSPGGPNLGNDMPMSAYHQASQLATSWHSKDSGGSASGSFDQ 566
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/161 (33%), Positives = 85/161 (52%), Gaps = 22/161 (13%)
Query: 72 VRTFQNETGASIKIADILPDSEERIV--VISARENSEMR---HSPAQDAVMRVHSRIAEI 126
V ++++GA + + R++ V AR ++ R SPAQ+A++ VH RI E
Sbjct: 108 VAKVRDDSGALVTVHPPFAGDYVRVIETVDGARREADGRPPMFSPAQEALLMVHRRILET 167
Query: 127 GFEPGQ----------------AVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVF 170
+ G RL+V +GCLLG+GG I+ +MR T IR+
Sbjct: 168 DADDGDEDGEYGPRGKDSRDRGKTTTRLIVPKMHVGCLLGKGGKIIEQMRMETKTHIRIL 227
Query: 171 PKDQ-APRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETI 210
P+DQ PRC S +E+VQV+G+ + V+ A+ IT RL+E++
Sbjct: 228 PRDQHTPRCVSLSEEVVQVVGDGNCVKKAVAIITDRLKESL 268
>gi|356550877|ref|XP_003543809.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine
max]
Length = 561
Score = 132 bits (331), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 81/210 (38%), Positives = 117/210 (55%), Gaps = 17/210 (8%)
Query: 16 HQRGYAPGYHSRG-YSSGPGHETVGGRNR---MFYEEEVVFKLLCHLDKVGSLIGKGGSI 71
+ GY HS+ + +GP G +R + E+ V++ +C K+GS+IG+GG I
Sbjct: 4 QRSGYGKRPHSQSDHDNGPNKRRNHGDDREQFVIDSEDTVYRYVCPGRKIGSVIGRGGEI 63
Query: 72 VRTFQNETGASIKIADILPDSEERIVVI-------SARENSEMRHSPAQDAVMRVHSRIA 124
V+ + ET A I+I + +P EER+V I +A E SPAQDA+ +VH R+
Sbjct: 64 VKQLRVETKAKIRIGETVPGCEERVVTIYGPSDETNAVEGGGNYVSPAQDALFKVHDRVV 123
Query: 125 EIGF------EPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAPRC 178
F + GQ V A+LLV S QIGC++G+GG IV +R TGA IR+ D P C
Sbjct: 124 AEDFHGDQDDDGGQQVTAKLLVPSDQIGCVIGKGGSIVQNIRGETGAQIRILKDDHLPMC 183
Query: 179 GSPHDEIVQVIGNYHSVQDALFHITSRLRE 208
DE+VQ+ G+ V+ AL+ I SRL +
Sbjct: 184 ALSSDELVQITGDAAVVKKALYQIASRLHD 213
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 66/188 (35%), Positives = 112/188 (59%), Gaps = 8/188 (4%)
Query: 48 EEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEM 107
+E +L+C +G +IGKGG I+ + ++GA+IK+ + +E ++ IS +E E
Sbjct: 281 KEFSVRLVCPTGNIGGVIGKGGMIINQIRQDSGATIKVDSSTIEGDECLIAISTKEFFEE 340
Query: 108 RHSPAQDAVMRVHSRIAEIGFEPGQAVVA---RLLVHSQQIGCLLGRGGHIVSEMRRATG 164
SP +A +R+ R +E E +++ RLLV + +IGCL+G+GG I+++MRR T
Sbjct: 341 TFSPTIEAAVRLQPRCSE-KVERDSGIISFTTRLLVPTTRIGCLIGKGGSIITDMRRLTK 399
Query: 165 ASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKRPGPNNGHSY 224
A+IR+ K+ P+ + DE+VQ+ G+ +DAL H+ +RLR +F R G + ++
Sbjct: 400 ANIRIISKENLPKIANEDDEMVQISGDLDVAKDALVHVLTRLRANLF--DREGALS--AF 455
Query: 225 LPPFPEMP 232
LP P +P
Sbjct: 456 LPVLPYLP 463
>gi|357496469|ref|XP_003618523.1| Poly(rC)-binding protein [Medicago truncatula]
gi|355493538|gb|AES74741.1| Poly(rC)-binding protein [Medicago truncatula]
Length = 569
Score = 131 bits (329), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 69/176 (39%), Positives = 102/176 (57%), Gaps = 13/176 (7%)
Query: 44 MFYEEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVI---- 99
+ +E+ VF+ LC K+GS+IG+GG IV+ + ET A I+I + +P +ER+V +
Sbjct: 41 VINKEDTVFRYLCPGRKIGSIIGRGGEIVKQLRVETKAKIRIGETVPGCDERVVTVYSSS 100
Query: 100 ---SARENSEMRHSPAQDAVMRVHSRIAEIGF------EPGQAVVARLLVHSQQIGCLLG 150
+ ++ + SPA+DA+ ++H R+ E G V A+LLV S QIGC+LG
Sbjct: 101 DETNTVDDGDKLVSPAEDALFKIHDRVVAEDLHSDQEEEGGPQVNAKLLVPSDQIGCVLG 160
Query: 151 RGGHIVSEMRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRL 206
+GG IV +R TGA IR+ D P C DE+VQ+ G+ V+ AL I SRL
Sbjct: 161 KGGQIVQNLRSETGAQIRILKDDHVPACALRSDELVQISGDAAVVKKALHQIASRL 216
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 66/196 (33%), Positives = 109/196 (55%), Gaps = 7/196 (3%)
Query: 41 RNRMFYEEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVIS 100
R+ + +E +L+C +G +IGKGG I+ + ++GA+IK+ D ++ ++ IS
Sbjct: 280 RDEISSSKEFSVRLVCPTGNLGGVIGKGGGIINQIRQDSGATIKV-DSSAKGDDCLITIS 338
Query: 101 ARENSEMRHSPAQDAVMRVHSRIAEIGFEPGQAV--VARLLVHSQQIGCLLGRGGHIVSE 158
+E E SP +A + + R +E + RLLV S +IGCL+G+GG I++E
Sbjct: 339 TKEFFEETFSPTVEAAVLLQPRCSEKSERDSGIISFTTRLLVSSSRIGCLIGKGGSIITE 398
Query: 159 MRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKRPGP 218
MRR T ++IR+ K+ P+ S DE+VQ+ G+ +DAL + +RLR +F + P
Sbjct: 399 MRRLTKSNIRILSKENLPKIASDDDEMVQISGDLDVAKDALVQVLTRLRANLFDREGAVP 458
Query: 219 NNGHSYLPPFPEMPPP 234
+LP P +P P
Sbjct: 459 G----FLPVLPYIPAP 470
>gi|356572762|ref|XP_003554535.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine
max]
Length = 548
Score = 131 bits (329), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 70/188 (37%), Positives = 112/188 (59%), Gaps = 8/188 (4%)
Query: 48 EEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEM 107
+E +L+C +G +IGKGG I+ + E+GA+IK+ + +E ++ IS +E E
Sbjct: 281 KEFSVRLVCPTGNIGGVIGKGGMIINQIRQESGATIKVDSSTTEGDECLIAISTKEFFEE 340
Query: 108 RHSPAQDAVMRVHSRIAEIGFEPGQAVVA---RLLVHSQQIGCLLGRGGHIVSEMRRATG 164
SP +A +R+ R +E E +++ RLLV + +IGCL+G+GG I++EMRR T
Sbjct: 341 TFSPTIEAAVRLQPRCSE-KVERDSGIISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTK 399
Query: 165 ASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKRPGPNNGHSY 224
A+IR+ K+ P+ S DE+VQ+ G+ +DAL H+ +RLR +F R G + S+
Sbjct: 400 ANIRIISKENLPKIASEDDEMVQISGDLDIAKDALVHVLTRLRANLF--DREGALS--SF 455
Query: 225 LPPFPEMP 232
LP P +P
Sbjct: 456 LPVLPYLP 463
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 115/372 (30%), Positives = 162/372 (43%), Gaps = 96/372 (25%)
Query: 48 EEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVI-------S 100
E+ V++ +C K+GS+IG+GG IV+ + ET A I+I + +P EER+V I +
Sbjct: 40 EDTVYRYVCPGRKIGSVIGRGGEIVKQLRVETKAKIRIGETVPGCEERVVTIYSPSDETN 99
Query: 101 ARENSEMRHSPAQDAVMRVHSRIAEIGF------EPGQAVVARLLVHSQQIGCLLGRGGH 154
A E SPAQDA+ +VH R+ F + GQ V A+LLV S QIGC++G+GG
Sbjct: 100 AVEGGGNYVSPAQDALFKVHDRVVAEDFHGDQDDDGGQQVTAKLLVPSDQIGCVIGKGGS 159
Query: 155 IVSEMRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMK 214
IV +R TGA IR+ D P C DE+VQ+ G+ V+ AL I SRL +
Sbjct: 160 IVQNIRSETGAQIRILKDDHLPLCALSSDELVQITGDASVVKKALCQIASRLHDN----- 214
Query: 215 RPGPNNGHSYLPPFPEMPPPPFRPRH--NPASPGSYP---SPVGPFHSMDRGMGPSQPFD 269
P R +H A PG YP S +GP G P
Sbjct: 215 --------------------PSRSQHLLTSAVPGVYPAGGSLIGP--------GAGAPI- 245
Query: 270 HQAAFSHGMDPMVPPNSDRIPFPYGSERPGHGPTFDRPPSPRSWTPQGVGGGDPRGFDAS 329
G+ P+V YG + G T D P PRS PR ++
Sbjct: 246 ------VGIAPLVG--------AYGGYK---GDTGDWP--PRSMYSA------PRDEAST 280
Query: 330 SGFTPRNRPVESGNHAAILTSTTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDP 389
F+ R +V P + V G+ ++ IRQ SGA + V+
Sbjct: 281 KEFSVR-------------------LVCPTGNIGGVIGKGGMIINQIRQESGATIKVDSS 321
Query: 390 KPGATEGVVMVS 401
E ++ +S
Sbjct: 322 TTEGDECLIAIS 333
>gi|242039239|ref|XP_002467014.1| hypothetical protein SORBIDRAFT_01g018300 [Sorghum bicolor]
gi|241920868|gb|EER94012.1| hypothetical protein SORBIDRAFT_01g018300 [Sorghum bicolor]
Length = 542
Score = 131 bits (329), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 66/186 (35%), Positives = 108/186 (58%), Gaps = 28/186 (15%)
Query: 49 EVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISAREN---- 104
E ++++LC + K+GS++G+GG +V+ + ET A I++AD +P ++ER+++I +N
Sbjct: 42 ETIYRILCPVKKIGSVLGRGGDVVKALREETKAKIRVADPIPGADERVIIIFNYQNQPEL 101
Query: 105 ----SEMR----------HSPAQDAVMRVHSRIA----------EIGFEPGQAVVARLLV 140
+E + H AQDA++++H +I E E V AR+LV
Sbjct: 102 TDEAAETKFSDGLGNMKPHCFAQDALLKIHDKIVADEIHDGVAHEEKSESADDVTARILV 161
Query: 141 HSQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALF 200
Q+GCLLG+GG I+ ++R TGA IRV P + P+C DE+VQ+ G V+ AL+
Sbjct: 162 QGNQVGCLLGKGGSIIQQLRSDTGAGIRVLPSEDLPQCALKSDELVQISGAPSLVRKALY 221
Query: 201 HITSRL 206
I++RL
Sbjct: 222 EISTRL 227
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 57/151 (37%), Positives = 94/151 (62%), Gaps = 3/151 (1%)
Query: 48 EEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPD-SEERIVVISARENSE 106
EE ++LC + +GS+IGK G+ V+ + +TGA IK+ +I D S E ++++S++E
Sbjct: 292 EEFSIRILCASELIGSVIGKSGANVKRVEQQTGARIKVQEIDKDASGESLIIVSSKEVPS 351
Query: 107 MRHSPAQDAVMRVHSRIAEIGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGAS 166
SPA +A++ +H +++ + + RL+V S ++GC+LG GG +++EMRR TGA
Sbjct: 352 EPISPAIEALILLHDKVSAPSEKRHSST--RLVVPSSKVGCILGEGGKVITEMRRRTGAE 409
Query: 167 IRVFPKDQAPRCGSPHDEIVQVIGNYHSVQD 197
IRV+ K P+ S DE+VQ G H +D
Sbjct: 410 IRVYSKADKPKYLSFDDELVQTAGQIHGRED 440
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 53/100 (53%), Gaps = 17/100 (17%)
Query: 319 GGGDPRGFDASSGFTPRNRPVESGNHAAILTSTTIEVVIPQLYMAHVYGENNSNLSHIRQ 378
G D RG +++GF +TIE+ IP + + G NL+ IRQ
Sbjct: 437 GREDYRGLTSATGFL-----------------STIELRIPNSSLESIVGVGGVNLAEIRQ 479
Query: 379 ISGANVVVNDPKPGATEGVVMVSGTSDQMRAAQSLIHAFI 418
ISGA + +++ G++E VV + GT ++ +AAQSL+ FI
Sbjct: 480 ISGARLRLHEAHAGSSESVVEIQGTLEEAKAAQSLLQGFI 519
Score = 40.4 bits (93), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 33/51 (64%)
Query: 35 HETVGGRNRMFYEEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKI 85
H+ V + ++V ++L ++VG L+GKGGSI++ +++TGA I++
Sbjct: 140 HDGVAHEEKSESADDVTARILVQGNQVGCLLGKGGSIIQQLRSDTGAGIRV 190
>gi|357496471|ref|XP_003618524.1| Poly(rC)-binding protein [Medicago truncatula]
gi|355493539|gb|AES74742.1| Poly(rC)-binding protein [Medicago truncatula]
Length = 553
Score = 131 bits (329), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 69/176 (39%), Positives = 102/176 (57%), Gaps = 13/176 (7%)
Query: 44 MFYEEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVI---- 99
+ +E+ VF+ LC K+GS+IG+GG IV+ + ET A I+I + +P +ER+V +
Sbjct: 41 VINKEDTVFRYLCPGRKIGSIIGRGGEIVKQLRVETKAKIRIGETVPGCDERVVTVYSSS 100
Query: 100 ---SARENSEMRHSPAQDAVMRVHSRIAEIGF------EPGQAVVARLLVHSQQIGCLLG 150
+ ++ + SPA+DA+ ++H R+ E G V A+LLV S QIGC+LG
Sbjct: 101 DETNTVDDGDKLVSPAEDALFKIHDRVVAEDLHSDQEEEGGPQVNAKLLVPSDQIGCVLG 160
Query: 151 RGGHIVSEMRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRL 206
+GG IV +R TGA IR+ D P C DE+VQ+ G+ V+ AL I SRL
Sbjct: 161 KGGQIVQNLRSETGAQIRILKDDHVPACALRSDELVQISGDAAVVKKALHQIASRL 216
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 66/196 (33%), Positives = 109/196 (55%), Gaps = 7/196 (3%)
Query: 41 RNRMFYEEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVIS 100
R+ + +E +L+C +G +IGKGG I+ + ++GA+IK+ D ++ ++ IS
Sbjct: 280 RDEISSSKEFSVRLVCPTGNLGGVIGKGGGIINQIRQDSGATIKV-DSSAKGDDCLITIS 338
Query: 101 ARENSEMRHSPAQDAVMRVHSRIAEIGFEPGQAV--VARLLVHSQQIGCLLGRGGHIVSE 158
+E E SP +A + + R +E + RLLV S +IGCL+G+GG I++E
Sbjct: 339 TKEFFEETFSPTVEAAVLLQPRCSEKSERDSGIISFTTRLLVSSSRIGCLIGKGGSIITE 398
Query: 159 MRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKRPGP 218
MRR T ++IR+ K+ P+ S DE+VQ+ G+ +DAL + +RLR +F + P
Sbjct: 399 MRRLTKSNIRILSKENLPKIASDDDEMVQISGDLDVAKDALVQVLTRLRANLFDREGAVP 458
Query: 219 NNGHSYLPPFPEMPPP 234
+LP P +P P
Sbjct: 459 G----FLPVLPYIPAP 470
>gi|413933964|gb|AFW68515.1| hypothetical protein ZEAMMB73_983755 [Zea mays]
Length = 768
Score = 131 bits (329), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 66/185 (35%), Positives = 107/185 (57%), Gaps = 25/185 (13%)
Query: 49 EVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENS--- 105
E ++++LC K+GS++G+GG IV+ + ET A I++AD +P ++ER+++I +N
Sbjct: 42 ETIYRILCPAKKIGSVLGRGGDIVKALREETKAKIRVADSIPGADERVIIIFNYQNQPEL 101
Query: 106 --------------EMR-HSPAQDAVMRVHSRIA------EIGF-EPGQAVVARLLVHSQ 143
M+ H AQDA++++H +I E+ E V AR+LV
Sbjct: 102 TDEAAEKQISDGLGNMKPHCFAQDALLKIHDKIVADEIYDEVAHDESSDDVTARILVQGN 161
Query: 144 QIGCLLGRGGHIVSEMRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHIT 203
Q+GCLLG+GG I+ ++R TGA IRV + P+C DE+VQ+ G V+ AL+ I+
Sbjct: 162 QVGCLLGKGGSIIQQLRSDTGAGIRVLSSENLPQCALQSDELVQISGAPSLVRKALYEIS 221
Query: 204 SRLRE 208
+RL +
Sbjct: 222 TRLHQ 226
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 71/197 (36%), Positives = 105/197 (53%), Gaps = 16/197 (8%)
Query: 48 EEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPD-SEERIVVISARENSE 106
EE ++LC + +GS+IGK G+ VR + +TGA IK+ +I D S ER++++S+ E
Sbjct: 288 EEFSIRILCASELIGSVIGKSGANVRRVEQQTGARIKVQEIDKDASGERLIIVSSNEIPT 347
Query: 107 MRHSPAQDAVMRVHSRIAEIGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGAS 166
SP +A++ +H +++ RL+V S ++GC+LG GG +++EMRR TGA
Sbjct: 348 EPISPTIEALILLHDKVS--ASSEKHHSSTRLVVPSNKVGCILGEGGQVITEMRRRTGAE 405
Query: 167 IRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKRPGPNNGHSYLP 226
IRV+ K P+ S DE+VQV G + AL I SRLR N
Sbjct: 406 IRVYSKADKPKYLSFGDELVQVAGPPAIARGALTEIASRLRTRTLRDTSTANN------- 458
Query: 227 PFPEMPPPPFRPRHNPA 243
PPPF P +P
Sbjct: 459 ------PPPFAPSDDPT 469
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/69 (44%), Positives = 45/69 (65%)
Query: 350 STTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATEGVVMVSGTSDQMRA 409
S+TIE+ IP + + G NL+ IRQISGA + +++ G++E VV + GT DQ +A
Sbjct: 679 SSTIELRIPNSSLESIVGVGGVNLAEIRQISGARLRLHEAHAGSSESVVEIQGTLDQAKA 738
Query: 410 AQSLIHAFI 418
AQSL+ FI
Sbjct: 739 AQSLLEGFI 747
Score = 40.8 bits (94), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 29/38 (76%)
Query: 48 EEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKI 85
++V ++L ++VG L+GKGGSI++ +++TGA I++
Sbjct: 150 DDVTARILVQGNQVGCLLGKGGSIIQQLRSDTGAGIRV 187
>gi|225452863|ref|XP_002283766.1| PREDICTED: KH domain-containing protein At4g18375 [Vitis vinifera]
gi|296082939|emb|CBI22240.3| unnamed protein product [Vitis vinifera]
Length = 548
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 69/171 (40%), Positives = 102/171 (59%), Gaps = 12/171 (7%)
Query: 48 EEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVI-------S 100
E+ V++ LC K+GS+IG+GG IV+ + +T + I+I + +P EER+V I +
Sbjct: 41 EDTVYRYLCPGRKIGSIIGRGGEIVKQLRVDTKSKIRIGETVPGCEERVVTIYSSSDETN 100
Query: 101 ARENSEMRHSPAQDAVMRVHSRIA--EI---GFEPGQAVVARLLVHSQQIGCLLGRGGHI 155
A ++S+ SPAQDA+ RVH R+ E+ E V RLLV S QIGC++G+GG I
Sbjct: 101 AFDDSDTFVSPAQDALFRVHDRVVSEEVHGEDSEEASQVTVRLLVPSDQIGCVIGKGGQI 160
Query: 156 VSEMRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRL 206
+ +R +GA +R+ D P C DE+VQ+ G V+ AL+ I SRL
Sbjct: 161 IQSIRSESGAQVRILKDDHLPSCALSSDELVQISGEPSLVRKALYQIASRL 211
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 58/162 (35%), Positives = 98/162 (60%), Gaps = 9/162 (5%)
Query: 75 FQNETGASIKIADI-LPDSEERIVVISARENSEMRHSPAQDAVMRVHSRIAEIGFEPGQA 133
+ E+GA+IK+ ++++ ++ ISA+E E SP +A +R+ R +E E
Sbjct: 307 IRQESGAAIKVDSTSAAEADDCLIAISAKEFFEDTFSPTIEAAVRLQPRCSE-KVERDSG 365
Query: 134 VVA---RLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAPRCGSPHDEIVQVIG 190
+V+ RLLV + +IGCL+G+GG I++EMR+ T A+IR+ K+ P+ S DE+VQ+ G
Sbjct: 366 IVSFTTRLLVPTSRIGCLIGKGGAIITEMRKLTKANIRILSKENLPKVASEDDEMVQIAG 425
Query: 191 NYHSVQDALFHITSRLRETIFPMKRPGPNNGHSYLPPFPEMP 232
+ +DAL +T+RLR +F R G + +++P P +P
Sbjct: 426 DLDVAKDALIQVTTRLRANLF--DREGAVS--AFVPVLPYLP 463
>gi|255584811|ref|XP_002533123.1| Poly(rC)-binding protein, putative [Ricinus communis]
gi|223527086|gb|EEF29268.1| Poly(rC)-binding protein, putative [Ricinus communis]
Length = 405
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 74/212 (34%), Positives = 120/212 (56%), Gaps = 14/212 (6%)
Query: 23 GYHSRGYSSGPGHETVGGRNRMFYEEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGAS 82
G SR S P E +E +++C +G +IGKGG+I+ + E+GA
Sbjct: 136 GDWSRSLYSAPRDE--------LSSKEFSLRIVCPTGNIGGVIGKGGTIINQIRQESGAV 187
Query: 83 IKIADILPDSEERIVVISARENSEMRHSPAQDAVMRVHSRIAE-IGFEPGQ-AVVARLLV 140
IK+ + ++ ++ +SA+E + ++SP +A +R+ R +E I + G + RLLV
Sbjct: 188 IKVDSSTAEGDDCLITVSAKEFFDDQYSPTIEAAIRLQPRCSEKIARDSGLISFTTRLLV 247
Query: 141 HSQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALF 200
+ +IGCLLG+GG I++EMR+ T A+IR+ KD P+ S DE+VQ+ G+ +DAL
Sbjct: 248 PTSRIGCLLGKGGVIINEMRKVTKANIRILGKDNLPKVASEDDEMVQISGDLDVAKDALT 307
Query: 201 HITSRLRETIFPMKRPGPNNGHSYLPPFPEMP 232
H++ RLR F R G + ++LP P +P
Sbjct: 308 HVSRRLRANAF--DREGAVS--TFLPVLPYLP 335
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 37/80 (46%), Positives = 49/80 (61%)
Query: 129 EPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAPRCGSPHDEIVQV 188
E G V ARL+V S QIGC++G+GG IV +R TGA IR+ + P C DE+VQ+
Sbjct: 8 EGGHQVTARLIVPSDQIGCIIGKGGQIVQNIRSETGAQIRILKDEHLPPCALSTDELVQI 67
Query: 189 IGNYHSVQDALFHITSRLRE 208
G V+ AL+ I +RL E
Sbjct: 68 SGEVAVVKKALYQIATRLHE 87
Score = 39.7 bits (91), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 27/37 (72%)
Query: 49 EVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKI 85
+V +L+ D++G +IGKGG IV+ ++ETGA I+I
Sbjct: 12 QVTARLIVPSDQIGCIIGKGGQIVQNIRSETGAQIRI 48
>gi|357112139|ref|XP_003557867.1| PREDICTED: KH domain-containing protein At4g18375-like
[Brachypodium distachyon]
Length = 542
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 78/210 (37%), Positives = 117/210 (55%), Gaps = 33/210 (15%)
Query: 32 GPGHETVGGRNRMFYEE-------------------EVVFKLLCHLDKVGSLIGKGGSIV 72
GPGH G+ Y E + V++ LC K+GS+IG+GG I
Sbjct: 3 GPGHRNSHGKRHSDYSENGGGKRRNPGDDTYAPGPDDTVYRYLCTSRKIGSIIGRGGEIA 62
Query: 73 RTFQNETGASIKIADILPDSEERIVVI--SARE-----NSEMRHSPAQDAVMRVHSR-IA 124
+ + +T A I+I + +P +ER++ I S+RE ++E + PAQDA+ RVH + IA
Sbjct: 63 KQLRTDTQAKIRIGESVPGCDERVITIFSSSRETNTIEDTEDKVCPAQDALFRVHEKLIA 122
Query: 125 EIG-----FEPGQA-VVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAPRC 178
+ G E G A V RLLV S QIGC++G+GGHI+ +R TG+ IRV ++ P C
Sbjct: 123 DDGPGDEENEEGLAQVTVRLLVPSDQIGCIIGKGGHIIQGIRSDTGSQIRVLSNERLPAC 182
Query: 179 GSPHDEIVQVIGNYHSVQDALFHITSRLRE 208
G DE++Q+ G+ V+ AL ++SRL +
Sbjct: 183 GISGDELLQISGDPLVVRKALLQVSSRLHD 212
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/187 (36%), Positives = 111/187 (59%), Gaps = 5/187 (2%)
Query: 48 EEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEM 107
++ +LLC VG +IGKGG I++ + E+GA IK+ D ++ I+ +SA+E E
Sbjct: 278 KDFSLRLLCAASDVGGVIGKGGGIIKQIRQESGAFIKV-DSSSAEDDCIITVSAKEFFED 336
Query: 108 RHSPAQDAVMRVHSRIAEIGF-EPGQ-AVVARLLVHSQQIGCLLGRGGHIVSEMRRATGA 165
SP DA +R+ + +E E G+ + RLLV + QIGCL+G+GG I++E+RR + A
Sbjct: 337 PVSPTIDATVRLQPKCSEKTDPESGEPSYTTRLLVSTSQIGCLIGKGGSIITEIRRTSRA 396
Query: 166 SIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKRPGPNNGHSYL 225
+IR+ K+ P+ S +E+VQ+ G+ + AL IT+RL+ F +R G +G +
Sbjct: 397 NIRILSKENVPKVASEDEEMVQISGDLEVARHALVQITTRLKANFF--EREGALSGFQPV 454
Query: 226 PPFPEMP 232
P+ MP
Sbjct: 455 IPYHPMP 461
>gi|296086352|emb|CBI31941.3| unnamed protein product [Vitis vinifera]
Length = 583
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 69/174 (39%), Positives = 105/174 (60%), Gaps = 13/174 (7%)
Query: 48 EEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVI--SARE-- 103
E+ V++ LC + K+GS+IG+GG I + ++ET ++I+I + +P EER+V I S+ E
Sbjct: 107 EDTVYRYLCPVRKIGSIIGRGGDIAKQLRSETKSNIRIGETMPGCEERVVTIYSSSEETN 166
Query: 104 ---NSEMRHSPAQDAVMRVHSRI------AEIGFEPGQAVVARLLVHSQQIGCLLGRGGH 154
++ SPAQDA+ RVH RI A+ E Q V R+LV S QIGC++G+GG
Sbjct: 167 PFGDTGELVSPAQDALFRVHDRIVAGELPADEEPEEAQQVTVRMLVPSDQIGCVIGKGGQ 226
Query: 155 IVSEMRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRE 208
++ +R T A IR+ + P C DE++Q+IG+ V+ AL + SRL E
Sbjct: 227 VIQNIRSETRAQIRILKDEHLPPCALSSDELLQIIGDASVVRKALHQLASRLHE 280
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 57/138 (41%), Positives = 84/138 (60%), Gaps = 3/138 (2%)
Query: 76 QNETGASIKIADILPDSEERIVVISARENSEMRHSPAQDAVMRVHSRIAEIG-FEPGQAV 134
+ E+GASIK+ + ++ I+ ISA+E E SP DA +R+ R +E E +V
Sbjct: 346 RQESGASIKVDSSSAEGDDCIIFISAKEFFE-DPSPTIDAALRLQPRCSEKAERESSDSV 404
Query: 135 VA-RLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYH 193
V RLLV S +IGCL+G+GG I+SEMR T A+IR+ K+ P+ S DE+VQ+ G +
Sbjct: 405 VTTRLLVPSSRIGCLIGKGGAIISEMRSVTRANIRILSKENLPKVASEDDEMVQITGELN 464
Query: 194 SVQDALFHITSRLRETIF 211
+AL +T RL+ +F
Sbjct: 465 VASNALLQVTLRLKANLF 482
>gi|388511497|gb|AFK43810.1| unknown [Lotus japonicus]
Length = 279
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 65/187 (34%), Positives = 111/187 (59%), Gaps = 8/187 (4%)
Query: 49 EVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMR 108
E +++C +G +IGKGG+I+ + ++GA+IK+ + ++ ++ IS +E +
Sbjct: 13 EFSVRVVCPTGNIGGVIGKGGAIINQIRQDSGATIKVDSSATEGDDCLIAISTKEFFDDS 72
Query: 109 HSPAQDAVMRVHSRIAEIGFEPGQAVVA---RLLVHSQQIGCLLGRGGHIVSEMRRATGA 165
SP +A +R+ R ++ E +V+ RLLV S +IGCL+G+GG I++EMRR T A
Sbjct: 73 FSPTIEAAVRLQPRCSD-KVERDSGIVSFTTRLLVPSSRIGCLIGKGGTIITEMRRLTKA 131
Query: 166 SIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKRPGPNNGHSYL 225
+IR+ PK+ P+ S DE+VQ+ G+ +DAL + +RL+ +F +R P +L
Sbjct: 132 NIRILPKEDLPKIASEDDEMVQISGDLDVAKDALVQVLTRLKANLFDKERAVPG----FL 187
Query: 226 PPFPEMP 232
P P +P
Sbjct: 188 PVMPYLP 194
>gi|359473301|ref|XP_002272287.2| PREDICTED: KH domain-containing protein At4g18375-like [Vitis
vinifera]
Length = 517
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 69/175 (39%), Positives = 105/175 (60%), Gaps = 13/175 (7%)
Query: 48 EEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVI--SARE-- 103
E+ V++ LC + K+GS+IG+GG I + ++ET ++I+I + +P EER+V I S+ E
Sbjct: 41 EDTVYRYLCPVRKIGSIIGRGGDIAKQLRSETKSNIRIGETMPGCEERVVTIYSSSEETN 100
Query: 104 ---NSEMRHSPAQDAVMRVHSRI------AEIGFEPGQAVVARLLVHSQQIGCLLGRGGH 154
++ SPAQDA+ RVH RI A+ E Q V R+LV S QIGC++G+GG
Sbjct: 101 PFGDTGELVSPAQDALFRVHDRIVAGELPADEEPEEAQQVTVRMLVPSDQIGCVIGKGGQ 160
Query: 155 IVSEMRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRET 209
++ +R T A IR+ + P C DE++Q+IG+ V+ AL + SRL E
Sbjct: 161 VIQNIRSETRAQIRILKDEHLPPCALSSDELLQIIGDASVVRKALHQLASRLHEN 215
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/138 (41%), Positives = 84/138 (60%), Gaps = 3/138 (2%)
Query: 76 QNETGASIKIADILPDSEERIVVISARENSEMRHSPAQDAVMRVHSRIAEIG-FEPGQAV 134
+ E+GASIK+ + ++ I+ ISA+E E SP DA +R+ R +E E +V
Sbjct: 280 RQESGASIKVDSSSAEGDDCIIFISAKEFFE-DPSPTIDAALRLQPRCSEKAERESSDSV 338
Query: 135 VA-RLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYH 193
V RLLV S +IGCL+G+GG I+SEMR T A+IR+ K+ P+ S DE+VQ+ G +
Sbjct: 339 VTTRLLVPSSRIGCLIGKGGAIISEMRSVTRANIRILSKENLPKVASEDDEMVQITGELN 398
Query: 194 SVQDALFHITSRLRETIF 211
+AL +T RL+ +F
Sbjct: 399 VASNALLQVTLRLKANLF 416
>gi|4314357|gb|AAD15568.1| putative RNA-binding protein [Arabidopsis thaliana]
Length = 649
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 115/396 (29%), Positives = 171/396 (43%), Gaps = 47/396 (11%)
Query: 47 EEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSE 106
E +VVFK++ G +IGK G+I+R QNETGASI + L S ER+V +SAREN E
Sbjct: 274 ERKVVFKIIFTSVVAGGIIGKQGTIIRALQNETGASISVGAPLKVSGERVVTVSARENLE 333
Query: 107 MRHSPAQDAVMRVHSRIAEI--------GFEPGQAVVARLLVHSQQIGCLLGRGGHIVSE 158
R+S AQ+A+ V +R EI G G V +LLV S G G E
Sbjct: 334 SRYSHAQNALALVFARSVEIDVEKGLRPGLHNGAIVKTKLLVPSHFANSFNGNGNR---E 390
Query: 159 MRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKRPG- 217
ATGA + + +Q S ++ ++++ G Y VQ AL H++S+LRE + P K G
Sbjct: 391 AIIATGADVHISVGNQVLEWISENEVVIEIKGEYSHVQKALTHVSSKLRENLLPKKVLGE 450
Query: 218 ----------PNNGHSYLPPF--PEMPPPPFRPRHNPASPGSYPSPVGPFHSMDRGMGPS 265
G S + + P +P+ S P M R G
Sbjct: 451 MRARVSNPYESAGGRSQIYNLQPSQQPSNSIKPQDASRGDSLSVSAAVPDLKMVRS-GAE 509
Query: 266 QPFDHQAAFSHGMDPMVPPNSDRIPFPYGSERPGHGPTFDRPPSP---RSWTPQGVGGGD 322
+ + + + N +P E G + S S P+ V
Sbjct: 510 VLKSNSVMHTEVLKEVDELNDFTLPQSLLEEDLTQGMKQLQMSSNGDVSSLPPRSVLAKQ 569
Query: 323 PRGFDASSGFTPRNRPVESGNHAAILTSTTIEVVIPQLYMAHVYGENNSNLSHIRQISGA 382
R S G + R +E + + + + +YG + + + +++QISGA
Sbjct: 570 QR---RSKGVSVRKITLE--------------LAVEKDALGSLYGRDGTGVDNLQQISGA 612
Query: 383 NVVVNDPKPGATEGVVMVSGTSDQMRAAQSLIHAFI 418
NV V DP TE V++SG +Q R A SLI + +
Sbjct: 613 NVDVKDPT--GTEATVLISGNPEQARTAMSLIESIL 646
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/191 (29%), Positives = 87/191 (45%), Gaps = 34/191 (17%)
Query: 48 EEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVI--SARENS 105
+E +++CH +G +IG G +V + ETG I + S+ +V I S N
Sbjct: 23 DETAIRVVCHASVIGGIIGSNGYVVSKLRRETGTKIHCESPVNGSDHWVVFIVGSTAVNQ 82
Query: 106 EM--------------------RHSPAQDAVMRVHSR-IAEIGFEPGQAVV--------A 136
+ S AQ A++RV R + + G VV
Sbjct: 83 SILLTDRVGEFSGGEHEDWVTCEVSAAQTALIRVLERSWVVLAAKDGGGVVDGEDEEAYC 142
Query: 137 RLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQ 196
+L QIG +LG GG V MRR +GA IRV P P CG+ +DE++Q+ G+ +V+
Sbjct: 143 GILADRNQIGAVLGLGGKNVEWMRRNSGAMIRVLP---PPICGTKNDELIQITGDVLAVK 199
Query: 197 DALFHITSRLR 207
AL ++S ++
Sbjct: 200 KALVMVSSYIQ 210
>gi|297833144|ref|XP_002884454.1| hypothetical protein ARALYDRAFT_477721 [Arabidopsis lyrata subsp.
lyrata]
gi|297330294|gb|EFH60713.1| hypothetical protein ARALYDRAFT_477721 [Arabidopsis lyrata subsp.
lyrata]
Length = 568
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 123/392 (31%), Positives = 179/392 (45%), Gaps = 48/392 (12%)
Query: 37 TVGGRNRMF--YEEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEE 94
TVGG + + + E VF++L KVGS+IG+ G +++ ET A IKI D P + E
Sbjct: 163 TVGGEEKRWPGWPGETVFRMLVPAQKVGSIIGRKGDVIKKIVEETRARIKILDGPPGTTE 222
Query: 95 RIVVISARENSEMRHSPAQDAVMRVHSRIAE-IGFEPGQA-----VVARLLVHSQQIGCL 148
R V++S +E E P+ D ++RVH RI + + EP QA V RLLV + Q G L
Sbjct: 223 RAVMVSGKEEPESSLPPSMDGLLRVHMRIVDGLDGEPSQAPPASKVSTRLLVPASQAGSL 282
Query: 149 LGRGGHIVSEMRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRE 208
+G+ G V ++ A+ +RV + P D +V+V+G SV AL I S LR+
Sbjct: 283 IGKQGGTVKAIQEASACIVRVLGSEDLPVFALQDDRVVEVVGEPTSVHKALELIASHLRK 342
Query: 209 TIFPMKRPGPNNGHSYLPPFP-EMPPPPFRPRHNPASPGSYPSPVGPFHSM-DRGMGPSQ 266
F + R S +P F +M P + H PA ++ P G S+ G G +
Sbjct: 343 --FLVDR-------SIIPFFENQMQKPTRQMDHMPAPHQAWGPPQGHAPSVGGGGYGHNP 393
Query: 267 PFDHQAAFSHGMDPMVPPNSDRIPFPYGSERPGHGPTFDRPPSPRSWTPQGVGGGDPRGF 326
P Q H D PP P +PP + P +G
Sbjct: 394 PPYMQPPPRH--DSYYPP-----------------PEMRQPPMEKQ--PH-------QGI 425
Query: 327 DASSGFTPRNRPVESGNHAAILTSTTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVV 386
A P N V S + T ++ IP Y V G + SN+S+ R++SGA V +
Sbjct: 426 SAYGREPPMNVHVSSAP-PMVAQQVTQQMQIPLSYADAVIGTSGSNISYTRRLSGATVTI 484
Query: 387 NDPKPGATEGVVMVSGTSDQMRAAQSLIHAFI 418
+ + E V VSGT Q++ A LI F+
Sbjct: 485 QETRGVPGEMTVEVSGTGSQVQTAMQLIQNFM 516
>gi|413933963|gb|AFW68514.1| hypothetical protein ZEAMMB73_983755 [Zea mays]
Length = 464
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 66/183 (36%), Positives = 106/183 (57%), Gaps = 25/183 (13%)
Query: 49 EVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENS--- 105
E ++++LC K+GS++G+GG IV+ + ET A I++AD +P ++ER+++I +N
Sbjct: 42 ETIYRILCPAKKIGSVLGRGGDIVKALREETKAKIRVADSIPGADERVIIIFNYQNQPEL 101
Query: 106 --------------EMR-HSPAQDAVMRVHSRIA------EIGF-EPGQAVVARLLVHSQ 143
M+ H AQDA++++H +I E+ E V AR+LV
Sbjct: 102 TDEAAEKQISDGLGNMKPHCFAQDALLKIHDKIVADEIYDEVAHDESSDDVTARILVQGN 161
Query: 144 QIGCLLGRGGHIVSEMRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHIT 203
Q+GCLLG+GG I+ ++R TGA IRV + P+C DE+VQ+ G V+ AL+ I+
Sbjct: 162 QVGCLLGKGGSIIQQLRSDTGAGIRVLSSENLPQCALQSDELVQISGAPSLVRKALYEIS 221
Query: 204 SRL 206
+RL
Sbjct: 222 TRL 224
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 64/161 (39%), Positives = 97/161 (60%), Gaps = 3/161 (1%)
Query: 48 EEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPD-SEERIVVISARENSE 106
EE ++LC + +GS+IGK G+ VR + +TGA IK+ +I D S ER++++S+ E
Sbjct: 288 EEFSIRILCASELIGSVIGKSGANVRRVEQQTGARIKVQEIDKDASGERLIIVSSNEIPT 347
Query: 107 MRHSPAQDAVMRVHSRIAEIGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGAS 166
SP +A++ +H +++ RL+V S ++GC+LG GG +++EMRR TGA
Sbjct: 348 EPISPTIEALILLHDKVS--ASSEKHHSSTRLVVPSNKVGCILGEGGQVITEMRRRTGAE 405
Query: 167 IRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLR 207
IRV+ K P+ S DE+VQV G + AL I SRLR
Sbjct: 406 IRVYSKADKPKYLSFGDELVQVAGPPAIARGALTEIASRLR 446
Score = 39.3 bits (90), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 29/38 (76%)
Query: 48 EEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKI 85
++V ++L ++VG L+GKGGSI++ +++TGA I++
Sbjct: 150 DDVTARILVQGNQVGCLLGKGGSIIQQLRSDTGAGIRV 187
>gi|413933965|gb|AFW68516.1| hypothetical protein ZEAMMB73_983755 [Zea mays]
Length = 537
Score = 128 bits (322), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 66/183 (36%), Positives = 106/183 (57%), Gaps = 25/183 (13%)
Query: 49 EVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENS--- 105
E ++++LC K+GS++G+GG IV+ + ET A I++AD +P ++ER+++I +N
Sbjct: 42 ETIYRILCPAKKIGSVLGRGGDIVKALREETKAKIRVADSIPGADERVIIIFNYQNQPEL 101
Query: 106 --------------EMR-HSPAQDAVMRVHSRIA------EIGF-EPGQAVVARLLVHSQ 143
M+ H AQDA++++H +I E+ E V AR+LV
Sbjct: 102 TDEAAEKQISDGLGNMKPHCFAQDALLKIHDKIVADEIYDEVAHDESSDDVTARILVQGN 161
Query: 144 QIGCLLGRGGHIVSEMRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHIT 203
Q+GCLLG+GG I+ ++R TGA IRV + P+C DE+VQ+ G V+ AL+ I+
Sbjct: 162 QVGCLLGKGGSIIQQLRSDTGAGIRVLSSENLPQCALQSDELVQISGAPSLVRKALYEIS 221
Query: 204 SRL 206
+RL
Sbjct: 222 TRL 224
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 58/151 (38%), Positives = 92/151 (60%), Gaps = 3/151 (1%)
Query: 48 EEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPD-SEERIVVISARENSE 106
EE ++LC + +GS+IGK G+ VR + +TGA IK+ +I D S ER++++S+ E
Sbjct: 288 EEFSIRILCASELIGSVIGKSGANVRRVEQQTGARIKVQEIDKDASGERLIIVSSNEIPT 347
Query: 107 MRHSPAQDAVMRVHSRIAEIGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGAS 166
SP +A++ +H +++ RL+V S ++GC+LG GG +++EMRR TGA
Sbjct: 348 EPISPTIEALILLHDKVS--ASSEKHHSSTRLVVPSNKVGCILGEGGQVITEMRRRTGAE 405
Query: 167 IRVFPKDQAPRCGSPHDEIVQVIGNYHSVQD 197
IRV+ K P+ S DE+VQ G H ++D
Sbjct: 406 IRVYSKADKPKYLSFGDELVQAAGQIHGLED 436
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/69 (44%), Positives = 45/69 (65%)
Query: 350 STTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATEGVVMVSGTSDQMRA 409
S+TIE+ IP + + G NL+ IRQISGA + +++ G++E VV + GT DQ +A
Sbjct: 448 SSTIELRIPNSSLESIVGVGGVNLAEIRQISGARLRLHEAHAGSSESVVEIQGTLDQAKA 507
Query: 410 AQSLIHAFI 418
AQSL+ FI
Sbjct: 508 AQSLLEGFI 516
Score = 39.3 bits (90), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 29/38 (76%)
Query: 48 EEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKI 85
++V ++L ++VG L+GKGGSI++ +++TGA I++
Sbjct: 150 DDVTARILVQGNQVGCLLGKGGSIIQQLRSDTGAGIRV 187
>gi|224127654|ref|XP_002329331.1| predicted protein [Populus trichocarpa]
gi|222870785|gb|EEF07916.1| predicted protein [Populus trichocarpa]
Length = 563
Score = 128 bits (322), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 82/205 (40%), Positives = 116/205 (56%), Gaps = 11/205 (5%)
Query: 49 EVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMR 108
E K+LC K+G +IGKGGS V+ Q ETGASI + D +SEER + +SA E
Sbjct: 310 EFSMKILCSTGKIGGVIGKGGSNVKIVQQETGASIHVEDASAESEERAIRVSAFEGLWNP 369
Query: 109 HSPAQDAVMRVHSRIAEIGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIR 168
S DA++++ + ++ F ++ RLLV S ++GC+LG+GG +++EMRR A IR
Sbjct: 370 RSQTIDAILQLQDKTSD--FSEKGMIITRLLVPSSKVGCILGQGGQVINEMRRRLQADIR 427
Query: 169 VFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKRPGPNNGHSYLPPF 228
V+PK+ P+C S +E+VQ+ GNY +DAL I SRLR + ++ P
Sbjct: 428 VYPKNDKPKCASDDEELVQISGNYGVAKDALAEIASRLRARTL-------RDANAGTEPG 480
Query: 229 PEMPPPPFRPRHNPASPGSYPSPVG 253
P P P F P N PG P P G
Sbjct: 481 PAGPVPGFGPARN--LPGRGPQPSG 503
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 89/290 (30%), Positives = 134/290 (46%), Gaps = 53/290 (18%)
Query: 10 PAAEPFHQRGYAPGYHSRGYSSGPGHETVGGRNRMFYEEEVVFKLLCHLDKVGSLIGKGG 69
P F ++G + + +S G E G + + V+++LC K+G +IGKGG
Sbjct: 12 PGNNLFKRKGVSSSRKGK-WSDSHGEECSG-------DGDTVYRILCPSRKIGGVIGKGG 63
Query: 70 SIVRTFQNETGASIKIADILPDSEERIVVISARENSEMR--------------------H 109
+IV+ + ET + I +AD + S+ER+++I + + R H
Sbjct: 64 NIVKALREETQSKITVADSVQGSDERVIIIYSSSDKPPRKMDGDEGLPAGNGQQEAFEPH 123
Query: 110 SPAQDAVMRVHSRIAEIGFEPGQA---------VVARLLVHSQQIGCLLGRGGHIVSEMR 160
AQDA+++VH RI E G A V ARLLV + +GC+LG+ G ++ +R
Sbjct: 124 CAAQDALLKVHDRIVEEDLFGGMASDDDNDNNVVTARLLVPNNMVGCVLGKRGDVIQRLR 183
Query: 161 RATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKRPG--- 217
TGA+IRV P D P C DE+VQ+ G + AL+ I+ L + K P
Sbjct: 184 SETGANIRVLPADHLPSCAMDTDELVQISGKPAVAKRALYEISILLHQNPRKDKLPSVPM 243
Query: 218 PNNGHSYLPP---FPEMPPP--PFRPRHNPA--------SPGSYPSPVGP 254
P G ++ PP M PP P P N G++PS GP
Sbjct: 244 PYGGRTFHPPSDSMANMLPPGNPMWPHRNSTPHSMPWMGEYGNHPSEFGP 293
>gi|308081899|ref|NP_001183640.1| uncharacterized protein LOC100502234 [Zea mays]
gi|238013618|gb|ACR37844.1| unknown [Zea mays]
gi|414867002|tpg|DAA45559.1| TPA: hypothetical protein ZEAMMB73_773291 [Zea mays]
gi|414867003|tpg|DAA45560.1| TPA: hypothetical protein ZEAMMB73_773291 [Zea mays]
gi|414867004|tpg|DAA45561.1| TPA: hypothetical protein ZEAMMB73_773291 [Zea mays]
Length = 541
Score = 128 bits (322), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 70/173 (40%), Positives = 102/173 (58%), Gaps = 14/173 (8%)
Query: 48 EEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVI---SAREN 104
++ V++ LC K+GS+IG+GG I + + ET A I+I + +P +ER+V I S + N
Sbjct: 36 DDTVYRYLCASRKIGSIIGRGGEIAKQLRTETQAKIRIGESVPGCDERVVTIFSTSRKTN 95
Query: 105 S----EMRHSPAQDAVMRVHSRIAE---IGFEPGQA----VVARLLVHSQQIGCLLGRGG 153
+ E PAQDA+ RVH R+A +G E + V RLLV S QIGC++G+GG
Sbjct: 96 TIDGAEDEVCPAQDALFRVHERLASDEGLGNEDSEEISPQVTVRLLVPSDQIGCIIGKGG 155
Query: 154 HIVSEMRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRL 206
I+ +R TGA IRV D P C DE++Q+ G+ V+ AL ++SRL
Sbjct: 156 QIIQGIRSETGAQIRVLSNDHIPACAISGDELLQISGDTVVVRKALHQVSSRL 208
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 75/211 (35%), Positives = 114/211 (54%), Gaps = 8/211 (3%)
Query: 48 EEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPD-SEERIVVISARENSE 106
+E +LLC VG +IGKGG I++ + E+GA IK+A D ++ I+ +SA+E E
Sbjct: 276 KEFSLRLLCAAANVGGVIGKGGGIIKQIRQESGALIKVASSNSDPDDDCIITVSAKEFFE 335
Query: 107 MRHSPAQDAVMRVHSRIAEIG-FEPG-QAVVARLLVHSQQIGCLLGRGGHIVSEMRRATG 164
SP DA +R+ R +E E Q+ RLLV + +IGCL+G+GG I++E+RR +
Sbjct: 336 DPVSPTIDAAVRLQPRCSEKSDLESAEQSYTTRLLVSTSRIGCLIGKGGSIITEIRRTSR 395
Query: 165 ASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKRPGPNNGHSY 224
A++R+ K+ P+ + DE+VQ+ G ++AL I +RL+ F +R G S
Sbjct: 396 ANVRILSKENVPKVAAEDDEMVQITGGLDVARNALVQIATRLKANFF--EREGS---LSA 450
Query: 225 LPPFPEMPPPPFRPRHNPASPGSYPSPVGPF 255
PP P P P G PVG +
Sbjct: 451 FPPVIPYHPLPAGVSDEPKYLGRDTKPVGHY 481
Score = 40.4 bits (93), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 31/50 (62%)
Query: 36 ETVGGRNRMFYEEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKI 85
E +G + +V +LL D++G +IGKGG I++ ++ETGA I++
Sbjct: 122 EGLGNEDSEEISPQVTVRLLVPSDQIGCIIGKGGQIIQGIRSETGAQIRV 171
>gi|413933966|gb|AFW68517.1| hypothetical protein ZEAMMB73_983755 [Zea mays]
Length = 428
Score = 128 bits (321), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 66/183 (36%), Positives = 106/183 (57%), Gaps = 25/183 (13%)
Query: 49 EVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENS--- 105
E ++++LC K+GS++G+GG IV+ + ET A I++AD +P ++ER+++I +N
Sbjct: 42 ETIYRILCPAKKIGSVLGRGGDIVKALREETKAKIRVADSIPGADERVIIIFNYQNQPEL 101
Query: 106 --------------EMR-HSPAQDAVMRVHSRIA------EIGF-EPGQAVVARLLVHSQ 143
M+ H AQDA++++H +I E+ E V AR+LV
Sbjct: 102 TDEAAEKQISDGLGNMKPHCFAQDALLKIHDKIVADEIYDEVAHDESSDDVTARILVQGN 161
Query: 144 QIGCLLGRGGHIVSEMRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHIT 203
Q+GCLLG+GG I+ ++R TGA IRV + P+C DE+VQ+ G V+ AL+ I+
Sbjct: 162 QVGCLLGKGGSIIQQLRSDTGAGIRVLSSENLPQCALQSDELVQISGAPSLVRKALYEIS 221
Query: 204 SRL 206
+RL
Sbjct: 222 TRL 224
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 56/142 (39%), Positives = 88/142 (61%), Gaps = 3/142 (2%)
Query: 48 EEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPD-SEERIVVISARENSE 106
EE ++LC + +GS+IGK G+ VR + +TGA IK+ +I D S ER++++S+ E
Sbjct: 288 EEFSIRILCASELIGSVIGKSGANVRRVEQQTGARIKVQEIDKDASGERLIIVSSNEIPT 347
Query: 107 MRHSPAQDAVMRVHSRIAEIGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGAS 166
SP +A++ +H +++ RL+V S ++GC+LG GG +++EMRR TGA
Sbjct: 348 EPISPTIEALILLHDKVS--ASSEKHHSSTRLVVPSNKVGCILGEGGQVITEMRRRTGAE 405
Query: 167 IRVFPKDQAPRCGSPHDEIVQV 188
IRV+ K P+ S DE+VQV
Sbjct: 406 IRVYSKADKPKYLSFGDELVQV 427
Score = 38.9 bits (89), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 29/38 (76%)
Query: 48 EEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKI 85
++V ++L ++VG L+GKGGSI++ +++TGA I++
Sbjct: 150 DDVTARILVQGNQVGCLLGKGGSIIQQLRSDTGAGIRV 187
>gi|326512112|dbj|BAJ96037.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 541
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 72/208 (34%), Positives = 115/208 (55%), Gaps = 33/208 (15%)
Query: 32 GPGHETVGGRNRMFYEE-------------------EVVFKLLCHLDKVGSLIGKGGSIV 72
GPGH G+ + Y E + V++ LC K+GS+IG+GG I
Sbjct: 3 GPGHRNSHGKRQSDYSENGGGKRRNPGDDTYAPGPDDTVYRYLCTSRKIGSIIGRGGEIA 62
Query: 73 RTFQNETGASIKIADILPDSEERIVVI--SARE-----NSEMRHSPAQDAVMRVHSRIAE 125
+ +++T A I+I + +P +ER++ I S+RE ++E + PAQDA+ RVH ++A
Sbjct: 63 KQLRSDTQAKIRIGESVPACDERVITIFSSSRETNTIEDTEDKVCPAQDALFRVHEKLAT 122
Query: 126 ----IGFEPGQA---VVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAPRC 178
+ E ++ V RLLV S QIGC++G+GGHI+ +R TG+ IRV + P C
Sbjct: 123 DDGPVNKENEESLGQVTVRLLVPSDQIGCIIGKGGHIIQGIRSDTGSQIRVLSNEHLPLC 182
Query: 179 GSPHDEIVQVIGNYHSVQDALFHITSRL 206
+ DE++ + G+ V+ AL ++SRL
Sbjct: 183 ATSGDELLLITGDPMVVRKALLQVSSRL 210
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 76/218 (34%), Positives = 120/218 (55%), Gaps = 9/218 (4%)
Query: 48 EEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEM 107
+E +LLC VG +IGKGG I++ + E+GA IK+ D ++ I+ +SA+E E
Sbjct: 278 KEFSLRLLCAAANVGGVIGKGGGIIKQIRQESGAFIKV-DSSSAEDDCIITVSAKEFFED 336
Query: 108 RHSPAQDAVMRVHSRIAE-IGFEPGQ-AVVARLLVHSQQIGCLLGRGGHIVSEMRRATGA 165
SP DA +R+ R +E I E G+ + RLLV + +IGCL+G+GG I++E+RR + A
Sbjct: 337 PVSPTIDATVRLQPRCSEKIDAESGEPSYTTRLLVSTSRIGCLIGKGGSIITEIRRTSRA 396
Query: 166 SIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKRPGPNNGHSYL 225
+IR+ K P+ S +E+V + G+ + AL IT+RL+ F +R G +G +
Sbjct: 397 NIRIISKQDVPKVASDDEEMVLISGDLDFARHALLQITTRLKANFF--EREGALSGFPPV 454
Query: 226 PPFPEMPPP----PFRPRHNPASPGSYPSPVGPFHSMD 259
P+ +P + R N ++ YP G S D
Sbjct: 455 IPYHPLPASVSDEKYLSRDNKSAGHDYPYSSGYRASDD 492
>gi|297740744|emb|CBI30926.3| unnamed protein product [Vitis vinifera]
Length = 435
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 59/173 (34%), Positives = 108/173 (62%), Gaps = 4/173 (2%)
Query: 48 EEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEM 107
EE++ ++LC DK+G +IG+GGS +++ + +GA +++ D D +E ++ +++ E+ +
Sbjct: 117 EELIIRVLCPFDKIGRVIGRGGSSIKSVREASGAHVEVDDTKADRDECLITVTSTESVDD 176
Query: 108 RHSPAQDAVMRVHSRIAEIGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASI 167
S A +AV+ + ++I + E V RLLV S+ IGC++G+ G I++E+R+ T A +
Sbjct: 177 LKSMAVEAVLLLQAKIND---EDDDTVAIRLLVPSKIIGCIIGKSGSIINEIRKRTRADV 233
Query: 168 RVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKRPGPNN 220
R+ K + P+C +DE+++V+G SV+DAL I RLR+ + G N
Sbjct: 234 RI-SKSERPKCADANDELIEVVGEVGSVRDALVQIVLRLRDDALKDRDTGHNT 285
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 48/72 (66%)
Query: 349 TSTTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATEGVVMVSGTSDQMR 408
T +T ++VIP + V G+ +N+++IR+ISGA + ++D K + V ++SGT +Q R
Sbjct: 363 TPSTFDMVIPANAVGKVMGKGGANIANIRKISGAVIEISDSKSSRGDRVALISGTPEQKR 422
Query: 409 AAQSLIHAFILC 420
A++LI AFI+
Sbjct: 423 TAENLIQAFIMA 434
Score = 37.7 bits (86), Expect = 10.0, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 39/84 (46%)
Query: 336 NRPVESGNHAAILTSTTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATE 395
N PV SG A+ I V+ P + V G S++ +R+ SGA+V V+D K E
Sbjct: 104 NLPVVSGYGASRSEELIIRVLCPFDKIGRVIGRGGSSIKSVREASGAHVEVDDTKADRDE 163
Query: 396 GVVMVSGTSDQMRAAQSLIHAFIL 419
++ V+ T + A +L
Sbjct: 164 CLITVTSTESVDDLKSMAVEAVLL 187
>gi|357112153|ref|XP_003557874.1| PREDICTED: KH domain-containing protein At4g18375-like
[Brachypodium distachyon]
Length = 538
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 76/223 (34%), Positives = 117/223 (52%), Gaps = 39/223 (17%)
Query: 48 EEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVI--SARE-- 103
++ V++ LC K+GS+IG+GG I + + +T A I+I + +P +ER++ I S+RE
Sbjct: 38 DDTVYRYLCASRKIGSIIGRGGEIAKQLRTDTQAKIRIGESVPGCDERVITIFSSSRETN 97
Query: 104 ---NSEMRHSPAQDAVMRVHSRIA-------EIGFEPGQAVVARLLVHSQQIGCLLGRGG 153
++E + PAQDA+ RVH ++ E E V+ RLLV S QIGC++G+GG
Sbjct: 98 TVEDTEDKVCPAQDALFRVHEKLITDDGPGDEENEEGLAQVIVRLLVPSDQIGCIIGKGG 157
Query: 154 HIVSEMRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPM 213
HI+ +R TG+ IRV + P C DE++Q+ G+ V+ AL ++SRL +
Sbjct: 158 HIIQGIRSDTGSHIRVLSTEHLPACAISGDELLQISGDPLVVRKALLQVSSRLHDN---- 213
Query: 214 KRPGPNNGHSYLPPFPEMPPPPFRPRHNPASPGSYPSPVGPFH 256
P R +H AS + P PVG H
Sbjct: 214 ---------------------PSRSQHLLASSLTQPYPVGSRH 235
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 69/187 (36%), Positives = 111/187 (59%), Gaps = 5/187 (2%)
Query: 48 EEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEM 107
+E +LLC VG +IGKGG I++ + E+GA IK+ D ++ I+ +SA+E E
Sbjct: 278 KEFSLRLLCAASDVGGVIGKGGGIIKQIRQESGAFIKV-DSSSAEDDCIITVSAKEFFED 336
Query: 108 RHSPAQDAVMRVHSRIAEIGF-EPGQ-AVVARLLVHSQQIGCLLGRGGHIVSEMRRATGA 165
SP DA +R+ R +E E G+ + RLLV + +IGCL+G+GG I++E+RR + A
Sbjct: 337 PISPTIDATVRLQPRCSEKTDPESGEPSYTTRLLVSTSRIGCLIGKGGSIITEIRRTSRA 396
Query: 166 SIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKRPGPNNGHSYL 225
+IR+ K+ P+ S +E+VQ+ G+ + AL IT+RL+ F +R G +G +
Sbjct: 397 NIRILSKENVPKVASEDEEMVQISGDLDVAKHALVQITTRLKANFF--EREGSLSGFQPV 454
Query: 226 PPFPEMP 232
P+ +P
Sbjct: 455 IPYHPLP 461
>gi|225443912|ref|XP_002278367.1| PREDICTED: KH domain-containing protein At4g18375 [Vitis vinifera]
Length = 623
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 59/173 (34%), Positives = 108/173 (62%), Gaps = 4/173 (2%)
Query: 48 EEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEM 107
EE++ ++LC DK+G +IG+GGS +++ + +GA +++ D D +E ++ +++ E+ +
Sbjct: 305 EELIIRVLCPFDKIGRVIGRGGSSIKSVREASGAHVEVDDTKADRDECLITVTSTESVDD 364
Query: 108 RHSPAQDAVMRVHSRIAEIGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASI 167
S A +AV+ + ++I + E V RLLV S+ IGC++G+ G I++E+R+ T A +
Sbjct: 365 LKSMAVEAVLLLQAKIND---EDDDTVAIRLLVPSKIIGCIIGKSGSIINEIRKRTRADV 421
Query: 168 RVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKRPGPNN 220
R+ K + P+C +DE+++V+G SV+DAL I RLR+ + G N
Sbjct: 422 RI-SKSERPKCADANDELIEVVGEVGSVRDALVQIVLRLRDDALKDRDTGHNT 473
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/237 (27%), Positives = 106/237 (44%), Gaps = 31/237 (13%)
Query: 38 VGGRNRMFYEEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIV 97
V R+ +E +V+++LC +GS+IGK G ++ + + +T A IK+ D P +++R++
Sbjct: 25 VNERDEKGSDELIVYRILCPDGVIGSVIGKSGKVINSIRQDTRAKIKVVDPFPGAKDRVI 84
Query: 98 VISARE------------NSEMRHSPAQDAVMRVHSRI--AEIGFEPG-----QAVVARL 138
I N + PAQDA+++VH+ I A E ++
Sbjct: 85 TIYCYVKEKEEVEVDDEFNDKQPLCPAQDALLKVHAAIVNAVASLENSDKKKKDKEECQI 144
Query: 139 LVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAP---RCGSPHDEIVQVIGNYHSV 195
LV S Q ++G+ G + +R T A+I++ KD C D V + G+ +V
Sbjct: 145 LVPSSQSANVIGKAGATIKRLRSKTRANIKITAKDSTDPSHSCAMEFDNFVLIAGDSEAV 204
Query: 196 QDALFHITSRLRETIFPMKRPGPNNGHSYLPPFPEMPPPPFRPRHNPASP--GSYPS 250
+ ALF I++ M + P PE PP P P P G YPS
Sbjct: 205 KKALFAISA-------IMYKFTPREEIPLDTTVPEAPPSIIIPSDVPIYPAGGFYPS 254
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 48/71 (67%)
Query: 349 TSTTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATEGVVMVSGTSDQMR 408
T +T ++VIP + V G+ +N+++IR+ISGA + ++D K + V ++SGT +Q R
Sbjct: 551 TPSTFDMVIPANAVGKVMGKGGANIANIRKISGAVIEISDSKSSRGDRVALISGTPEQKR 610
Query: 409 AAQSLIHAFIL 419
A++LI AFI+
Sbjct: 611 TAENLIQAFIM 621
Score = 38.1 bits (87), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 39/84 (46%)
Query: 336 NRPVESGNHAAILTSTTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATE 395
N PV SG A+ I V+ P + V G S++ +R+ SGA+V V+D K E
Sbjct: 292 NLPVVSGYGASRSEELIIRVLCPFDKIGRVIGRGGSSIKSVREASGAHVEVDDTKADRDE 351
Query: 396 GVVMVSGTSDQMRAAQSLIHAFIL 419
++ V+ T + A +L
Sbjct: 352 CLITVTSTESVDDLKSMAVEAVLL 375
>gi|147818880|emb|CAN73780.1| hypothetical protein VITISV_042181 [Vitis vinifera]
Length = 637
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 59/173 (34%), Positives = 108/173 (62%), Gaps = 4/173 (2%)
Query: 48 EEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEM 107
EE++ ++LC DK+G +IG+GGS +++ + +GA +++ D D +E ++ +++ E+ +
Sbjct: 305 EELIIRVLCPFDKIGRVIGRGGSSIKSVREASGAHVEVDDTKADRDECLITVTSTESVDD 364
Query: 108 RHSPAQDAVMRVHSRIAEIGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASI 167
S A +AV+ + ++I + E V RLLV S+ IGC++G+ G I++E+R+ T A +
Sbjct: 365 LKSMAVEAVLLLQAKIND---EDDDTVAIRLLVPSKIIGCIIGKSGSIINEIRKRTRADV 421
Query: 168 RVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKRPGPNN 220
R+ K + P+C +DE+++V+G SV+DAL I RLR+ + G N
Sbjct: 422 RI-SKSERPKCADANDELIEVVGEVGSVRDALVQIVLRLRDDALKDRDTGHNT 473
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/237 (27%), Positives = 106/237 (44%), Gaps = 31/237 (13%)
Query: 38 VGGRNRMFYEEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIV 97
V R+ +E +V+++LC +GS+IGK G ++ + + +T A IK+ D P +++R++
Sbjct: 25 VNERDEKGSDELIVYRILCPDGVIGSVIGKSGKVINSIRQDTRAKIKVVDPFPGAKDRVI 84
Query: 98 VISARE------------NSEMRHSPAQDAVMRVHSRI--AEIGFEPG-----QAVVARL 138
I N + PAQDA+++VH+ I A E ++
Sbjct: 85 TIYCYVKEKEEVEVDDEFNDKQPLCPAQDALLKVHAAIVNAVASLENSDKKKKDKEECQI 144
Query: 139 LVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAP---RCGSPHDEIVQVIGNYHSV 195
LV S Q ++G+ G + +R T A+I++ KD C D V + G+ +V
Sbjct: 145 LVPSSQSANVIGKAGATIKRLRSKTRANIKITAKDSTDPSHSCAMEFDNFVLIAGDSEAV 204
Query: 196 QDALFHITSRLRETIFPMKRPGPNNGHSYLPPFPEMPPPPFRPRHNPASP--GSYPS 250
+ ALF I++ M + P PE PP P P P G YPS
Sbjct: 205 KKALFAISA-------IMYKFTPREEIPLDTTVPEAPPSIIIPSDVPIYPAGGFYPS 254
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 48/71 (67%)
Query: 349 TSTTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATEGVVMVSGTSDQMR 408
T +T ++VIP + V G+ +N+++IR+ISGA + ++D K + V ++SGT +Q R
Sbjct: 565 TPSTFDMVIPANAVGKVMGKGGANIANIRKISGAVIEISDSKSSRGDRVALISGTPEQKR 624
Query: 409 AAQSLIHAFIL 419
A++LI AFI+
Sbjct: 625 TAENLIQAFIM 635
Score = 38.1 bits (87), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 39/84 (46%)
Query: 336 NRPVESGNHAAILTSTTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATE 395
N PV SG A+ I V+ P + V G S++ +R+ SGA+V V+D K E
Sbjct: 292 NLPVVSGYGASRSEELIIRVLCPFDKIGRVIGRGGSSIKSVREASGAHVEVDDTKADRDE 351
Query: 396 GVVMVSGTSDQMRAAQSLIHAFIL 419
++ V+ T + A +L
Sbjct: 352 CLITVTSTESVDDLKSMAVEAVLL 375
>gi|357146815|ref|XP_003574121.1| PREDICTED: KH domain-containing protein At4g18375-like
[Brachypodium distachyon]
Length = 777
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 66/189 (34%), Positives = 105/189 (55%), Gaps = 29/189 (15%)
Query: 49 EVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVI-SARENSEM 107
E V+++LC K+GS++G+GG IV+ + ET A I++AD +P +EER+++I ++ SE
Sbjct: 45 ETVYRILCPGKKIGSVLGRGGHIVKALREETKAKIRVADSIPGAEERVIIIFDYQDQSEQ 104
Query: 108 RHSPAQ------------------DAVMRVHSRIAE----------IGFEPGQAVVARLL 139
AQ DA++++H +I+ E V AR+L
Sbjct: 105 TDEAAQNISNNDGSENMKLQCFAQDALLKIHDKISTHEDPHDGAIHEKSETAADVTARIL 164
Query: 140 VHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDAL 199
V Q+GCLLG+GG I+ ++R TGA IR+ P P+C DE+VQ+ G V+ AL
Sbjct: 165 VPGNQVGCLLGKGGSIIQQLRNDTGAGIRILPSQDLPQCALQSDELVQISGAPSLVRKAL 224
Query: 200 FHITSRLRE 208
+ I++RL +
Sbjct: 225 YEISTRLHQ 233
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 95/275 (34%), Positives = 146/275 (53%), Gaps = 31/275 (11%)
Query: 48 EEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPD-SEERIVVISARENSE 106
EE ++LC + +G +IGK G+ VR + +TGA I + ++ D S ER++V+S++E
Sbjct: 297 EEFSVRILCASELIGPVIGKSGANVRQVEQQTGARILVQELDKDASGERLIVLSSKEIPG 356
Query: 107 MRHSPAQDAVMRVHSRIAEIGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGAS 166
SPA +A++ +HS+++ + ++ RL+V S ++GC+LG GG +++EMRR GA
Sbjct: 357 DPVSPAIEALILLHSKVS--ASSEKRHLITRLVVPSSKVGCILGEGGKVITEMRRRIGAE 414
Query: 167 IRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKRPGPNNGHSYLP 226
IRV+ K P+ S +E+VQV G +DAL I SRLR R G +G++ LP
Sbjct: 415 IRVYSKADKPKYLSFDEELVQVAGPPDIARDALTEIASRLRTRTL---RDG-GSGNNPLP 470
Query: 227 PFPE-------MPPPPFRPRHNPAS-PGSYPSPVGPFHSMDRGMGPSQPFDHQAAFS-HG 277
P P F PA+ P P+ P+ R + QP+ A+ S +G
Sbjct: 471 LAPSDGPRGDIFPSREFTQNGRPANPPYGRPANDSPY----RRLAIDQPYGRPASDSLYG 526
Query: 278 M---DPMV--PPNSDRIPFPYGSERPGHGPTFDRP 307
M DP+ P N PYG RP + P + RP
Sbjct: 527 MPANDPIYGRPANDP----PYG--RPANDPPYGRP 555
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 47/70 (67%)
Query: 349 TSTTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATEGVVMVSGTSDQMR 408
+S+++E++IP + V G NL+ IRQISGA + + + PG++E ++ + G DQ+R
Sbjct: 685 SSSSLELMIPNSSLGSVLGAGGVNLAEIRQISGARMKLLEGHPGSSESIMEIQGMPDQVR 744
Query: 409 AAQSLIHAFI 418
AAQSL+ FI
Sbjct: 745 AAQSLLQGFI 754
>gi|116787223|gb|ABK24418.1| unknown [Picea sitchensis]
gi|224286491|gb|ACN40952.1| unknown [Picea sitchensis]
Length = 481
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 118/384 (30%), Positives = 173/384 (45%), Gaps = 59/384 (15%)
Query: 51 VFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMRHS 110
VF+LL VG +IG+ G V+ ET + IKI + L + ER V++SA+E E S
Sbjct: 86 VFRLLVPTQMVGGIIGRKGEFVKKMCEETRSRIKILEGLRGTPERTVMVSAKEEPEAPVS 145
Query: 111 PAQDAVMRVHSRIAEIG----FEPGQA-------VVARLLVHSQQIGCLLGRGGHIVSEM 159
PA D ++RVH RI E G E G+A + RLLV Q G L+GR G + +
Sbjct: 146 PAMDGILRVHKRIIEGGPDGRGELGRAQQGGSGTISTRLLVAGTQAGSLIGRQGATIKAI 205
Query: 160 RRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRE-----TIFPMK 214
+ +GA +RV + P C D +V+V G SV A+ I S LR+ ++ P+
Sbjct: 206 QEGSGAIVRVLAAEDLPFCALADDRLVEVQGEAGSVHKAVELIVSHLRKFLVDRSVLPLF 265
Query: 215 RPGPNNGHSYLPPFPEMPPPPFRPRHNPASPGSYPSPVGPFHSMDRGMGPSQPFDHQAAF 274
G+ P E P HN +S S PS G G+G +Q +AF
Sbjct: 266 EADRTIGNQ---PQIEENLPHQSWGHNQSS--SVPSSGGA------GLGNTQYMS--SAF 312
Query: 275 SHGMDPMVPPNSDRIPFPYGSERPGHGPTFDRPPSPRSWTPQGVGGGDPRGFDASSGFTP 334
H D PP+ D P + V G DP + +G +
Sbjct: 313 QH--DNYYPPS-------------------DLPLESQGHHGLSVYGRDP----SLAGHSV 347
Query: 335 RNRPVESGNHAAILTSTTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGAT 394
N P A ++T T + IP Y + G +N+S++R+ SGA + V + +
Sbjct: 348 ANPP-----PAPVITQVTQHMQIPLSYADAIIGTAGANISYMRRNSGATIAVQETRGVPG 402
Query: 395 EGVVMVSGTSDQMRAAQSLIHAFI 418
E V + GT+ Q++ AQ LI F+
Sbjct: 403 EMTVEIRGTATQVQTAQQLIQNFM 426
>gi|110224788|emb|CAL07994.1| putative nucleic acid binding protein [Platanus x acerifolia]
Length = 288
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 68/185 (36%), Positives = 111/185 (60%), Gaps = 8/185 (4%)
Query: 48 EEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEM 107
+E +L+C +G +IGKGGS+++ + E+GA IK+ ++++ I+ IS++E E
Sbjct: 94 KEFSLRLVCPTGNIGGVIGKGGSVIKQIRQESGAFIKVDSSAAEADDCIISISSKEFFED 153
Query: 108 RHSPAQDAVMRVHSRIAEIG-FEPGQAV-VARLLVHSQQIGCLLGRGGHIVSEMRRATGA 165
SP DA +R+ + +E E G + RLLV + +IGCL+G+GG I+SEMR+ T A
Sbjct: 154 PISPTIDAAVRLQPKCSEKSDRESGDSTFTTRLLVPTSRIGCLIGKGGSIISEMRKVTKA 213
Query: 166 SIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKRPGPNNGH--- 222
+IR+ K+ P+ S DE+VQ+ G+ ++AL +T+RL+ F +R G +
Sbjct: 214 NIRILSKENLPKVASEDDEMVQITGDLDVARNALIQVTTRLKTNFF--EREGALSAFPPP 271
Query: 223 -SYLP 226
SYLP
Sbjct: 272 LSYLP 276
>gi|115453243|ref|NP_001050222.1| Os03g0376800 [Oryza sativa Japonica Group]
gi|18921324|gb|AAL82529.1|AC084766_15 putative nucleic acid binding protein [Oryza sativa Japonica Group]
gi|108708431|gb|ABF96226.1| KH domain-containing protein, putative, expressed [Oryza sativa
Japonica Group]
gi|108708432|gb|ABF96227.1| KH domain-containing protein, putative, expressed [Oryza sativa
Japonica Group]
gi|113548693|dbj|BAF12136.1| Os03g0376800 [Oryza sativa Japonica Group]
gi|125586438|gb|EAZ27102.1| hypothetical protein OsJ_11034 [Oryza sativa Japonica Group]
gi|215686826|dbj|BAG89676.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215695345|dbj|BAG90536.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215704897|dbj|BAG94925.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 542
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 74/210 (35%), Positives = 113/210 (53%), Gaps = 33/210 (15%)
Query: 32 GPGHETVGGRNRMFYEE-------------------EVVFKLLCHLDKVGSLIGKGGSIV 72
GPGH G+ Y E + V++ LC K+GS+IG+GG I
Sbjct: 3 GPGHRNSHGKRHSDYAENGGGKRRNPGDDTYAPGPDDTVYRYLCPSRKIGSIIGRGGEIA 62
Query: 73 RTFQNETGASIKIADILPDSEERIVVI--SARE-----NSEMRHSPAQDAVMRVHSRIA- 124
+ + +T A I+I + + +ER++ I S+RE ++E + PAQDA+ RVH +++
Sbjct: 63 KQMRADTQAKIRIGESVSGCDERVITIFSSSRETNTLVDAEDKVCPAQDALFRVHEKLSI 122
Query: 125 --EIGFEPGQA----VVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAPRC 178
+IG E V RLLV S QIGC++G+GGHI+ +R TGA IRV + P C
Sbjct: 123 DDDIGNEESDEGLAQVTVRLLVPSDQIGCIIGKGGHIIQGIRSDTGAHIRVLSNENLPAC 182
Query: 179 GSPHDEIVQVIGNYHSVQDALFHITSRLRE 208
DE++Q+ G+ V+ AL ++SRL +
Sbjct: 183 AISGDELLQISGDSTVVRKALLQVSSRLHD 212
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 80/233 (34%), Positives = 125/233 (53%), Gaps = 13/233 (5%)
Query: 48 EEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEM 107
+E +LLC VG +IGKGG I++ + E+GA IK+ D ++ I+ +SA+E E
Sbjct: 278 KEFSLRLLCAASNVGGVIGKGGGIIKQIRQESGAFIKV-DSSNTEDDCIITVSAKEFFED 336
Query: 108 RHSPAQDAVMRVHSRIAEIGFEPGQAV---VARLLVHSQQIGCLLGRGGHIVSEMRRATG 164
SP +A + + R +E +P A+ RLLV + +IGCL+G+GG I++E+RR +
Sbjct: 337 PVSPTINAAVHLQPRCSE-KTDPESAIPSYTTRLLVSTSRIGCLIGKGGSIITEIRRTSR 395
Query: 165 ASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKRPGPNNGHSY 224
A+IR+ K+ P+ + +E+VQ+ G+ V+ AL IT+RL+ F +R G +G
Sbjct: 396 ANIRILSKENVPKVAAEDEEMVQISGDLDVVRHALLQITTRLKANFF--EREGALSG--- 450
Query: 225 LPPFPEMPPPPFRPRHNPASPGSYPSPVG---PFHSMDRGMGPSQPFDHQAAF 274
PP P P P G P+G P+ S RG P D A++
Sbjct: 451 FPPVIPYHPLPVGVSEGPKYLGRDTKPLGHDYPYSSGYRGSDDIGPIDSYASY 503
>gi|125544080|gb|EAY90219.1| hypothetical protein OsI_11787 [Oryza sativa Indica Group]
Length = 542
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 74/210 (35%), Positives = 113/210 (53%), Gaps = 33/210 (15%)
Query: 32 GPGHETVGGRNRMFYEE-------------------EVVFKLLCHLDKVGSLIGKGGSIV 72
GPGH G+ Y E + V++ LC K+GS+IG+GG I
Sbjct: 3 GPGHRNSHGKRHSDYAENGGGKRRNPGDDTYAPGPDDTVYRYLCPSRKIGSIIGRGGEIA 62
Query: 73 RTFQNETGASIKIADILPDSEERIVVI--SARE-----NSEMRHSPAQDAVMRVHSRIA- 124
+ + +T A I+I + + +ER++ I S+RE ++E + PAQDA+ RVH +++
Sbjct: 63 KQMRADTQAKIRIGESVSGCDERVITIFSSSRETNTLVDAEDKVCPAQDALFRVHEKLSI 122
Query: 125 --EIGFEPGQA----VVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAPRC 178
+IG E V RLLV S QIGC++G+GGHI+ +R TGA IRV + P C
Sbjct: 123 DDDIGNEESDEGLAQVTVRLLVPSDQIGCIIGKGGHIIQGIRSDTGAHIRVLSNENLPAC 182
Query: 179 GSPHDEIVQVIGNYHSVQDALFHITSRLRE 208
DE++Q+ G+ V+ AL ++SRL +
Sbjct: 183 AISGDELLQISGDSTVVRKALLQVSSRLHD 212
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 80/233 (34%), Positives = 125/233 (53%), Gaps = 13/233 (5%)
Query: 48 EEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEM 107
+E +LLC VG +IGKGG I++ + E+GA IK+ D ++ I+ +SA+E E
Sbjct: 278 KEFSLRLLCAASNVGGVIGKGGGIIKQIRQESGAFIKV-DSSNTEDDCIITVSAKEFFED 336
Query: 108 RHSPAQDAVMRVHSRIAEIGFEPGQAV---VARLLVHSQQIGCLLGRGGHIVSEMRRATG 164
SP +A + + R +E +P A+ RLLV + +IGCL+G+GG I++E+RR +
Sbjct: 337 PVSPTINAAVHLQPRCSE-KTDPESAIPSYTTRLLVSTSRIGCLIGKGGSIITEIRRTSR 395
Query: 165 ASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKRPGPNNGHSY 224
A+IR+ K+ P+ + +E+VQ+ G+ V+ AL IT+RL+ F +R G +G
Sbjct: 396 ANIRILSKENVPKVAAEDEEMVQISGDLDVVRHALLQITTRLKANFF--EREGALSG--- 450
Query: 225 LPPFPEMPPPPFRPRHNPASPGSYPSPVG---PFHSMDRGMGPSQPFDHQAAF 274
PP P P P G P+G P+ S RG P D A++
Sbjct: 451 FPPVIPYHPLPVGVSEGPKYLGRDTKPLGHDYPYSSGYRGSDDISPIDSYASY 503
>gi|357501947|ref|XP_003621262.1| KH domain-containing protein [Medicago truncatula]
gi|355496277|gb|AES77480.1| KH domain-containing protein [Medicago truncatula]
Length = 571
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 64/182 (35%), Positives = 106/182 (58%), Gaps = 20/182 (10%)
Query: 47 EEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVI--SAREN 104
+++ V++ LC + K+GS+IG+GG IV+ + +T A I+I + +P +ER+V + + E+
Sbjct: 46 QDDTVYRYLCPVRKIGSIIGRGGEIVKQLRLDTKAKIRIGETVPGCDERVVTVYSVSDES 105
Query: 105 SEMRHS-----PAQDAVMRVHSRI----------AEIGFEP---GQAVVARLLVHSQQIG 146
++ S PA DA++R+H ++ ++ E G V A+LLV S QIG
Sbjct: 106 NDFEDSGEFMCPAMDALVRIHQKVIAEDLRGVEDEDVDMEKVDGGDLVTAKLLVASDQIG 165
Query: 147 CLLGRGGHIVSEMRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRL 206
C++G+GG IV +R TGA IR+ D+ P C DE+VQ+ G V+ AL + +RL
Sbjct: 166 CVIGKGGQIVQNIRSETGAQIRILKDDRLPLCALNSDELVQISGEIAVVKKALIQVAARL 225
Query: 207 RE 208
+
Sbjct: 226 HD 227
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 57/163 (34%), Positives = 94/163 (57%), Gaps = 5/163 (3%)
Query: 75 FQNETGASIKIADILPDSEERIVVISARENSEMRHSPAQDAVMRVHSRIAE-IGFEPG-Q 132
+ ++GA+IK+ + ++ ++ ISARE E S +A + + R +E + + G
Sbjct: 321 IRQDSGANIKVDSSATEGDDCLIAISARELFEDPFSATIEAAVLLQPRCSEKVERDSGIL 380
Query: 133 AVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNY 192
+ +RLLV S +IGCL+G+GG I++EMRR T A+IR+ K+ P+ + DE+VQ+ G
Sbjct: 381 SFTSRLLVSSSRIGCLIGKGGSIITEMRRLTKANIRILSKEDLPKIATEDDEMVQISGEL 440
Query: 193 HSVQDALFHITSRLRETIFPMKRPGPNN---GHSYLPPFPEMP 232
+DAL + +RLR +F +R + +YLP PE P
Sbjct: 441 DIAKDALLQVLTRLRANLFDKERSVSSLLPPVLAYLPASPEGP 483
>gi|224077694|ref|XP_002305366.1| predicted protein [Populus trichocarpa]
gi|222848330|gb|EEE85877.1| predicted protein [Populus trichocarpa]
Length = 262
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 75/212 (35%), Positives = 118/212 (55%), Gaps = 14/212 (6%)
Query: 23 GYHSRGYSSGPGHETVGGRNRMFYEEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGAS 82
G SR S P E +E +++C +G++IGKGG+I+ + E+GA+
Sbjct: 12 GDWSRSLYSAPRDE--------LASKEFSLRMVCPTANIGAVIGKGGTIINQIRQESGAT 63
Query: 83 IKIADILPDSEERIVVISARENSEMRHSPAQDAVMRVHSRIAE-IGFEPGQ-AVVARLLV 140
IK+ + ++ ++ ISA+E + ++SP +A +R+ R +E + + G + RLLV
Sbjct: 64 IKVDSSASEGDDCLITISAKEICDDQYSPTIEAALRLQPRCSEKMERDSGLFSFTTRLLV 123
Query: 141 HSQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALF 200
S IGCLLG+GG I+ EMR+ T A IR+ KD+ P+ DE+VQ+ G+ +DAL
Sbjct: 124 PSSHIGCLLGKGGLIIDEMRKLTKAIIRIPRKDKLPKTALDDDEMVQISGDLDIAKDALI 183
Query: 201 HITSRLRETIFPMKRPGPNNGHSYLPPFPEMP 232
I+ RLR F R G + + LP FP +P
Sbjct: 184 QISRRLRANAFD--REGLMS--AILPVFPYLP 211
>gi|224141011|ref|XP_002323868.1| predicted protein [Populus trichocarpa]
gi|222866870|gb|EEF04001.1| predicted protein [Populus trichocarpa]
Length = 531
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 68/182 (37%), Positives = 104/182 (57%), Gaps = 14/182 (7%)
Query: 41 RNRMFYE-EEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVI 99
R R + ++ V++ LC K+GS+IG+GG I++ + +T + I++ + +P EER+V I
Sbjct: 32 RERFVIDSQDTVYRYLCPARKIGSIIGRGGEIIKQLRIDTKSKIRVGETVPGCEERVVTI 91
Query: 100 -------SARENSEMRHSPAQDAVMRVHSRI------AEIGFEPGQAVVARLLVHSQQIG 146
+ E+S SPAQDA+ RVH ++ E E V A+LLV S QIG
Sbjct: 92 YSPSDETNEYEDSGNYISPAQDALFRVHDKVIAEDLQVEDDSEGSPQVTAKLLVPSDQIG 151
Query: 147 CLLGRGGHIVSEMRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRL 206
C++G+GG IV +R TGA IR+ + P C DE+VQ+ G ++ AL+ I SRL
Sbjct: 152 CIIGKGGQIVQNIRSETGAVIRILKDEHLPPCALSSDELVQISGEAAVLKKALYQIASRL 211
Query: 207 RE 208
+
Sbjct: 212 HD 213
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 68/188 (36%), Positives = 113/188 (60%), Gaps = 9/188 (4%)
Query: 48 EEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEM 107
+E +++C +G++IGKGG+I+ + E+GA+IK+ + + ++ ++ ISA+E +
Sbjct: 280 KEFSLRVVCPTANIGAVIGKGGTIINQIRQESGATIKVDSSVAEGDDCLITISAKEIYD- 338
Query: 108 RHSPAQDAVMRVHSRIAEIGFEPGQAVVA---RLLVHSQQIGCLLGRGGHIVSEMRRATG 164
+SP +A +R+ R +E E +++ RLLV S +IGCLLG+GG I+ EMR+ T
Sbjct: 339 HYSPTIEAAVRLQPRCSE-KMERDSGLISFTTRLLVPSSRIGCLLGKGGAIIDEMRKLTK 397
Query: 165 ASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKRPGPNNGHSY 224
A IR+ K+ P+ S DE+VQ+ G+ +DAL I+ RLR +F R G + +
Sbjct: 398 AIIRIPRKENLPKVASDDDEMVQIAGDLDVAKDALIQISRRLRANVF--DREGAMS--AI 453
Query: 225 LPPFPEMP 232
LP P +P
Sbjct: 454 LPVLPYLP 461
>gi|357124311|ref|XP_003563844.1| PREDICTED: KH domain-containing protein At4g18375-like
[Brachypodium distachyon]
Length = 666
Score = 124 bits (312), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 58/188 (30%), Positives = 111/188 (59%), Gaps = 7/188 (3%)
Query: 45 FYEEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISAREN 104
F +E++F++LC DK +L+G I+ Q E G +++ D++ S+ER V+I++RE
Sbjct: 337 FPYDEIIFRILCPNDKANNLVGSRDGILEMLQVEVGVDVRLTDLVVGSDERTVIITSREG 396
Query: 105 SEMRHSPAQDAVMRVHSRIAEIGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATG 164
+ PAQ+A++ + + I ++G + + RLLV S ++ C GR G + S+++R T
Sbjct: 397 PDHELFPAQEALLHIQTHIVDLGPDNDNIITTRLLVPSSEVACFEGRDGSL-SDIQRQTS 455
Query: 165 ASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKRPGPN----- 219
A++++ P+++ P C DE++Q++G + + AL +T+++R I+ + PN
Sbjct: 456 ANVQILPREELPSCALESDELIQIVGGIRAARSALMQVTTKIRSYIY-REMSVPNQIASI 514
Query: 220 NGHSYLPP 227
N H +PP
Sbjct: 515 NVHGSIPP 522
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 59/181 (32%), Positives = 93/181 (51%), Gaps = 25/181 (13%)
Query: 52 FKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMR--- 108
F++LC K G S + Q+++GA I I R++ ++ ++
Sbjct: 95 FRILCPESKT---YGFPASFIIKAQDDSGAIITIHAPFAGDPVRVIEMADGVPRDVDGRP 151
Query: 109 --HSPAQDAVMRVHSRIAEI----GFEPGQ------------AVVARLLVHSQQIGCLLG 150
SPAQ+A++ VH RI E G E G+ V RL+V +GCLLG
Sbjct: 152 PMFSPAQEALIMVHRRILETEPDDGDEDGEYGPRGKDARDRGKVTTRLVVPRLHVGCLLG 211
Query: 151 RGGHIVSEMRRATGASIRVFPKDQ-APRCGSPHDEIVQVIGNYHSVQDALFHITSRLRET 209
+GG I+ +MR T IR+ P+DQ PRC S +E+VQ++G + V+ A+ I+ RL+E+
Sbjct: 212 KGGKIIEQMRSETKTHIRILPRDQNTPRCVSLSEEVVQIVGEGNCVKKAVAIISDRLKES 271
Query: 210 I 210
+
Sbjct: 272 L 272
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 57/108 (52%)
Query: 312 SWTPQGVGGGDPRGFDASSGFTPRNRPVESGNHAAILTSTTIEVVIPQLYMAHVYGENNS 371
SW + GG F+ S R ++T +T+EVVIP+ +A + S
Sbjct: 550 SWHSKDSGGSASGSFEQGSNINDDIRSTIKRFAVPLVTRSTLEVVIPKSAVASLSMRAGS 609
Query: 372 NLSHIRQISGANVVVNDPKPGATEGVVMVSGTSDQMRAAQSLIHAFIL 419
L+ I ++SGA+V + + +PG E VV +SGT +Q AQSL+ FIL
Sbjct: 610 KLAQISEMSGASVTLGEDRPGVMEKVVRISGTPEQADKAQSLLQGFIL 657
>gi|359488265|ref|XP_003633728.1| PREDICTED: KH domain-containing protein At4g18375-like [Vitis
vinifera]
gi|296087281|emb|CBI33655.3| unnamed protein product [Vitis vinifera]
Length = 676
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 69/159 (43%), Positives = 104/159 (65%), Gaps = 2/159 (1%)
Query: 49 EVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMR 108
E K+LC K+G +IGKGG V+ Q ETGASI + D L +SEER++ +S+ E
Sbjct: 313 EFSMKILCPAGKIGGVIGKGGFNVKQLQQETGASIHVEDALAESEERVIRVSSFEALWNP 372
Query: 109 HSPAQDAVMRVHSRIAEIGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIR 168
S +A++++ ++ +E + G + RLLV S ++GC+LG+GGH+++EMRR T A IR
Sbjct: 373 RSQTIEAILQLQNKTSEYSDKGG--MTTRLLVPSSKVGCILGQGGHVINEMRRRTQADIR 430
Query: 169 VFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLR 207
V+ K+ P+C S +E+VQ+ GN+ +DAL I SRLR
Sbjct: 431 VYSKEDKPKCASDDEELVQISGNFGVAKDALAEIASRLR 469
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 92/266 (34%), Positives = 132/266 (49%), Gaps = 40/266 (15%)
Query: 23 GYHSRGYSSGPGHETVGGRNRMFYEEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGAS 82
G + RG + HE G +++ + V+++LC K+G +IGKGG IV+ + ET A
Sbjct: 21 GSNKRGRWNNSSHEQSFGNSQV---ADTVYRILCPSKKIGGVIGKGGGIVKALREETQAK 77
Query: 83 IKIADILPDSEERIVVI-----------SARENSEMR--------HSPAQDAVMRVHSRI 123
I +AD +P S+ER+++I + E+ EM H PAQDA+M+VH RI
Sbjct: 78 ITVADSVPGSDERVIIIYSAPTKNPKEHDSNEDPEMEEEQDHMEPHCPAQDALMKVHERI 137
Query: 124 AE------IGFE---PGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQ 174
E FE V ARLLV + +GCLLG+ G ++ +R TGA+IRV P +
Sbjct: 138 IEEDLFGGTEFEDDNENTVVTARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPAEH 197
Query: 175 APRCGSPHDEIVQVIGNYHSVQDALFHITSRL----RETIFPMKRPGPNNGHSYLPP--- 227
P C DE+VQ+ G + AL+ +++ L R+ P P G + PP
Sbjct: 198 LPTCAMSSDELVQISGKPAVAKKALYEVSTLLHQNPRKDKPPSSFPMSFGGQGFHPPGAS 257
Query: 228 FPEMPPP--PFRPRHNPASPGSYPSP 251
MPPP P N S G P P
Sbjct: 258 MGNMPPPGNPMWSNRNSNSQGVPPMP 283
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 56/97 (57%), Gaps = 4/97 (4%)
Query: 326 FDASSG----FTPRNRPVESGNHAAILTSTTIEVVIPQLYMAHVYGENNSNLSHIRQISG 381
F+ S G + P++ PV ++++E IP ++ V G N++++ +++G
Sbjct: 516 FELSKGGGLEYEPQSYPVPPAATGYHNVNSSMESKIPNNSVSSVIGMGGGNVANMSEMAG 575
Query: 382 ANVVVNDPKPGATEGVVMVSGTSDQMRAAQSLIHAFI 418
A V + DP+ G +E VV + G+S+ + AAQS++ AF+
Sbjct: 576 ARVKLQDPQSGGSECVVEIRGSSEHLTAAQSILQAFM 612
>gi|118485588|gb|ABK94645.1| unknown [Populus trichocarpa]
Length = 294
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 68/188 (36%), Positives = 113/188 (60%), Gaps = 9/188 (4%)
Query: 48 EEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEM 107
+E +++C +G++IGKGG+I+ + E+GA+IK+ + + ++ ++ ISA+E +
Sbjct: 29 KEFSLRVVCPTANIGAVIGKGGTIINQIRQESGATIKVDSSVAEGDDCLITISAKEIYD- 87
Query: 108 RHSPAQDAVMRVHSRIAEIGFEPGQAVVA---RLLVHSQQIGCLLGRGGHIVSEMRRATG 164
+SP +A +R+ R +E E +++ RLLV S +IGCLLG+GG I+ EMR+ T
Sbjct: 88 HYSPTIEAAVRLQPRCSE-KMERDSGLISFTTRLLVPSSRIGCLLGKGGAIIDEMRKLTK 146
Query: 165 ASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKRPGPNNGHSY 224
A IR+ K+ P+ S DE+VQ+ G+ +DAL I+ RLR +F R G + +
Sbjct: 147 AIIRIPRKENLPKVASDDDEMVQIAGDLDVAKDALIQISRRLRANVF--DREGAMS--AI 202
Query: 225 LPPFPEMP 232
LP P +P
Sbjct: 203 LPVLPYLP 210
>gi|224076902|ref|XP_002305041.1| predicted protein [Populus trichocarpa]
gi|222848005|gb|EEE85552.1| predicted protein [Populus trichocarpa]
Length = 623
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 69/203 (33%), Positives = 112/203 (55%), Gaps = 7/203 (3%)
Query: 49 EVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMR 108
E++ +LLC DK+G +IGKGGS +++ + +GA I++ D D +E I+ + A E+ +
Sbjct: 305 ELIIRLLCPFDKIGRVIGKGGSTIKSIRQVSGARIEVDDTKADRDECIITVIATESPDDL 364
Query: 109 HSPAQDAVMRVHSRIAEIGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIR 168
S A +A++ + +I + E V R LV S+ IGC++G+ G IV+E+R+ T A +
Sbjct: 365 KSMAVEAILLLQGKIND---EDNDIVGIRFLVPSKVIGCIIGKSGAIVNEIRKRTNADVC 421
Query: 169 VFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKRPGPNNG---HSYL 225
+ D+ +C +DE+V+V G SV+DAL I RLR+ + K G N+ S
Sbjct: 422 ISKVDKL-KCADSNDELVEVAGEVGSVRDALVQIVLRLRDDVLKEKDGGLNSSVGTDSVY 480
Query: 226 PPFPEMPPPPFRPRHNPASPGSY 248
P + P P P +P Y
Sbjct: 481 PVHAGISIPSILPSVPPVAPMGY 503
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 90/395 (22%), Positives = 155/395 (39%), Gaps = 75/395 (18%)
Query: 47 EEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVI--SAREN 104
+E VV+++LC + +GS+IGK G ++ + +NE+ A +K+ D P + R++ I + +E
Sbjct: 33 DELVVYRILCPDEVIGSVIGKSGKVINSIRNESRARVKVVDPFPGAMYRVITIYCNVKEK 92
Query: 105 SEMR----------HSPAQDAVMRVHSRIAEIGFEPGQA-------VVARLLVHSQQIGC 147
+ PAQDA+++VH+ I+ G + ++LV + Q
Sbjct: 93 GDADVDDDFHQADPLCPAQDALLKVHAAISNAVAALGDSDKRCRDKKECQILVPTSQSAN 152
Query: 148 LLGRGGHIVSEMRRATGASIRVFPKDQAP---RCGSPHDEIVQVIGNYHSVQDALFHITS 204
++G+ G + ++R T A+I++ KD + C D + + G +V+ ALF +++
Sbjct: 153 IIGKAGATIKKLRSKTRANIKITAKDASDPTHSCAMDFDNFLLITGESEAVKKALFAVSA 212
Query: 205 RLRETIFPMKRPGPNNGHSYLPPFPEMPPPPFRPRHNPASPGSYPSPVGPFHSMDRGMGP 264
M + P PE PP +
Sbjct: 213 -------IMYKFSPKEEIPLETTVPEAPPSII-------------------------ISS 240
Query: 265 SQPFDHQAAFSHGMDPMVPPNSDRIPFPYGSERPGHGPTFDRPPSPRSWTPQGVGGGDPR 324
P F DP+V S +P G+ H P F G GD R
Sbjct: 241 DVPIYQPGGFYPNADPIVSSRS--VPPILGAT---HIPEFQ-------------GYGDMR 282
Query: 325 GFDASSGFTPRNRPVESGNHAAILTSTTIEVVIPQLYMAHVYGENNSNLSHIRQISGANV 384
+S PV + I ++ P + V G+ S + IRQ+SGA +
Sbjct: 283 ---SSWPIYSSTVPVVPSFGNTSRSELIIRLLCPFDKIGRVIGKGGSTIKSIRQVSGARI 339
Query: 385 VVNDPKPGATEGVVMVSGTSDQMRAAQSLIHAFIL 419
V+D K E ++ V T + A +L
Sbjct: 340 EVDDTKADRDECIITVIATESPDDLKSMAVEAILL 374
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 47/69 (68%)
Query: 351 TTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATEGVVMVSGTSDQMRAA 410
+T+E+++P + V G+ +N+++IR+ISGA + ++D K + + +SG +Q +AA
Sbjct: 553 STLEMLVPANAVGKVIGKGGANIANIRKISGAMIEISDAKSARGDRIAYISGKPEQKQAA 612
Query: 411 QSLIHAFIL 419
++LI AFI+
Sbjct: 613 ENLIQAFIM 621
>gi|147790774|emb|CAN72739.1| hypothetical protein VITISV_027256 [Vitis vinifera]
Length = 668
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 69/159 (43%), Positives = 104/159 (65%), Gaps = 2/159 (1%)
Query: 49 EVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMR 108
E K+LC K+G +IGKGG V+ Q ETGASI + D L +SEER++ +S+ E
Sbjct: 341 EFSMKILCPAGKIGGVIGKGGFNVKQLQQETGASIHVEDALAESEERVIRVSSFEALWNP 400
Query: 109 HSPAQDAVMRVHSRIAEIGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIR 168
S +A++++ ++ +E + G + RLLV S ++GC+LG+GGH+++EMRR T A IR
Sbjct: 401 RSQTIEAILQLQNKTSEYSDKGG--MTTRLLVPSSKVGCILGQGGHVINEMRRRTQADIR 458
Query: 169 VFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLR 207
V+ K+ P+C S +E+VQ+ GN+ +DAL I SRLR
Sbjct: 459 VYSKEDKPKCASDDEELVQISGNFGVAKDALAEIASRLR 497
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 91/266 (34%), Positives = 132/266 (49%), Gaps = 40/266 (15%)
Query: 23 GYHSRGYSSGPGHETVGGRNRMFYEEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGAS 82
G + RG + HE G +++ + V+++LC K+G +IGKGG IV+ + ET A
Sbjct: 49 GSNKRGRWNNSSHEQSFGNSQV---ADTVYRILCPSKKIGGVIGKGGGIVKALREETQAK 105
Query: 83 IKIADILPDSEERIVVI-----------SARENSEMR--------HSPAQDAVMRVHSRI 123
I +AD +P S+ER+++I ++ E+ E H PAQDA+M+VH RI
Sbjct: 106 ITVADSVPGSDERVIIIYSAPTKNPKEHNSNEDPEREEEQDHMEPHCPAQDALMKVHERI 165
Query: 124 AE------IGFE---PGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQ 174
E FE V ARLLV + +GCLLG+ G ++ +R TGA+IRV P +
Sbjct: 166 IEEDLFGGTEFEDDNENTVVTARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPAEH 225
Query: 175 APRCGSPHDEIVQVIGNYHSVQDALFHITSRL----RETIFPMKRPGPNNGHSYLPP--- 227
P C DE+VQ+ G + AL+ +++ L R+ P P G + PP
Sbjct: 226 LPTCAMSSDELVQISGKPAVAKKALYEVSTLLHQNPRKDKPPSSFPMSFGGQGFHPPGAS 285
Query: 228 FPEMPPP--PFRPRHNPASPGSYPSP 251
MPPP P N S G P P
Sbjct: 286 MGNMPPPGNPMWSNRNSNSQGVPPMP 311
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 56/97 (57%), Gaps = 4/97 (4%)
Query: 326 FDASSG----FTPRNRPVESGNHAAILTSTTIEVVIPQLYMAHVYGENNSNLSHIRQISG 381
F+ S G + P++ PV ++++E IP ++ V G N++++ +++G
Sbjct: 544 FELSKGGGLEYEPQSYPVPPAATGYHNVNSSMESKIPNNSVSSVIGMGGGNVANMSEMAG 603
Query: 382 ANVVVNDPKPGATEGVVMVSGTSDQMRAAQSLIHAFI 418
A V + DP+ G +E VV + G+S+ + AAQS++ AF+
Sbjct: 604 ARVKLQDPQSGGSECVVEIRGSSEHLTAAQSILQAFM 640
>gi|449433573|ref|XP_004134572.1| PREDICTED: KH domain-containing protein At4g18375-like [Cucumis
sativus]
Length = 625
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 61/174 (35%), Positives = 105/174 (60%), Gaps = 4/174 (2%)
Query: 48 EEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEM 107
EE+V ++LC D +G +IGKGG +++ + +GA +++ D D +E I+ IS+ E+ +
Sbjct: 306 EELVVRVLCPFDNIGRVIGKGGGTIKSIRQASGARVEVDDTKRDCDECIITISSFESLDD 365
Query: 108 RHSPAQDAVMRVHSRIAEIGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASI 167
S A + V+ + +I + + G V+ RLL+ S+ IGC++G+ G I++E+R++T A I
Sbjct: 366 LKSMAVETVLLLQEKIND---DEGGTVIMRLLIPSKVIGCIIGKSGSIINEIRKSTRADI 422
Query: 168 RVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKRPGPNNG 221
R+ D+ +C S DE+V+V G V+DAL I RLR+ + G N+
Sbjct: 423 RISKGDKL-KCASSSDELVEVTGKVGCVRDALVQIVLRLRDDALKERDVGHNSA 475
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 102/421 (24%), Positives = 168/421 (39%), Gaps = 102/421 (24%)
Query: 14 PFHQRGYAPGYHSRGYSSGPGHETVGGRNRMFYEEEVVFKLLCHLDKVGSLIGKGGSIVR 73
P+ QR Y ++GY + ++ +E VV+++LC + +GS+IGK G ++
Sbjct: 7 PYGQRDY--NGDNKGY-----KRRITEQDDWVSDELVVYRILCPDEVIGSVIGKSGKVIN 59
Query: 74 TFQNETGASIKIADILPDSEERIVVI----SARENSEMRH--------SPAQDAVMRVHS 121
+ + ET A IK+ D P +++R++ I +E+ E+ AQDA+++VH+
Sbjct: 60 SIRQETRAKIKVVDPFPGAKDRVITIFCFVKDKEDVEVDDEFNDRQTLCAAQDALLKVHA 119
Query: 122 RIAEIGFEPGQ-------AVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQ 174
IA G ++L+ S Q ++G+ G + ++R T SI++ PKD
Sbjct: 120 AIANALASAGDLDRKQRDKEQCQILIPSSQSANVIGKAGSTIKKLRSKTRTSIKISPKDA 179
Query: 175 AP---RCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKRPGPNNGHSYLPPFPEM 231
C D + G V+ ALF I+S + + FP + P + + E
Sbjct: 180 TDPIHSCAMDFDNFAVIAGEPEGVRRALFAISSIMYK--FPPREEIPLDTN-----VNEA 232
Query: 232 PPPPFRPRHNP--ASPGSYPSPVGPFHSMDRGMGPSQPFDHQAAFSHGMDPMVPPNSDRI 289
PP P P ++ G YPS DP++PP S I
Sbjct: 233 PPNIIIPSDVPLYSAGGLYPSA---------------------------DPILPPRS--I 263
Query: 290 PFPYGSERPGHGPTFDRPPSPRSW---------TPQGVGGGDPRGFDASSGFTPRNRPVE 340
P G++ D P S +W P G+ G P
Sbjct: 264 PPMLGAQHVQD--LHDYPESGNAWPLYSSSLPVVPGGISGHPPS---------------- 305
Query: 341 SGNHAAILTSTTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATEGVVMV 400
+ V+ P + V G+ + IRQ SGA V V+D K E ++ +
Sbjct: 306 --------EELVVRVLCPFDNIGRVIGKGGGTIKSIRQASGARVEVDDTKRDCDECIITI 357
Query: 401 S 401
S
Sbjct: 358 S 358
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 48/69 (69%)
Query: 351 TTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATEGVVMVSGTSDQMRAA 410
+++E++IP V G+ +N+++IR+ISGA + ++D K + + ++SGTS+Q R A
Sbjct: 555 SSLEMLIPANAAGKVIGKGGANIANIRKISGALIEISDSKSSRGDRIALISGTSEQKRTA 614
Query: 411 QSLIHAFIL 419
++LI AFI+
Sbjct: 615 ENLIQAFIM 623
Score = 39.3 bits (90), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 44/88 (50%), Gaps = 10/88 (11%)
Query: 127 GFEPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAPRCGSPHDEIV 186
G P + +V R+L IG ++G+GG + +R+A+GA + V D C DE +
Sbjct: 301 GHPPSEELVVRVLCPFDNIGRVIGKGGGTIKSIRQASGARVEV--DDTKRDC----DECI 354
Query: 187 QVIGNYHSVQDALFHITSRLRETIFPMK 214
I ++ S+ D + S ET+ ++
Sbjct: 355 ITISSFESLDD----LKSMAVETVLLLQ 378
>gi|15229321|ref|NP_187112.1| RNA-binding KH domain-containing protein [Arabidopsis thaliana]
gi|6175183|gb|AAF04909.1|AC011437_24 putative RNA-binding protein [Arabidopsis thaliana]
gi|17979249|gb|AAL49941.1| AT3g04610/F7O18_9 [Arabidopsis thaliana]
gi|332640585|gb|AEE74106.1| RNA-binding KH domain-containing protein [Arabidopsis thaliana]
Length = 577
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 122/392 (31%), Positives = 177/392 (45%), Gaps = 48/392 (12%)
Query: 37 TVGGRNRMF--YEEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEE 94
TVGG + + + E VF++L KVGS+IG+ G +++ ET A IKI D P + E
Sbjct: 172 TVGGEEKRWPGWPGETVFRMLVPAQKVGSIIGRKGDVIKKIVEETRARIKILDGPPGTTE 231
Query: 95 RIVVISARENSEMRHSPAQDAVMRVHSRIAE-IGFEPGQA-----VVARLLVHSQQIGCL 148
R V++S +E E P+ D ++RVH RI + + E QA V RLLV + Q G L
Sbjct: 232 RAVMVSGKEEPESSLPPSMDGLLRVHMRIVDGLDGEASQAPPPSKVSTRLLVPASQAGSL 291
Query: 149 LGRGGHIVSEMRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRE 208
+G+ G V ++ A+ +RV + P D +V+V+G SV AL I S LR+
Sbjct: 292 IGKQGGTVKAIQEASACIVRVLGSEDLPVFALQDDRVVEVVGEPTSVHRALELIASHLRK 351
Query: 209 TIFPMKRPGPNNGHSYLPPFP-EMPPPPFRPRHNPASPGSYPSPVGPFHSMDRG-MGPSQ 266
F + R S +P F +M P + H P S+ P G S+ G G +
Sbjct: 352 --FLVDR-------SIIPFFENQMQKPTRQMDHMPPPHQSWGPPQGHAPSVGGGGYGHNP 402
Query: 267 PFDHQAAFSHGMDPMVPPNSDRIPFPYGSERPGHGPTFDRPPSPRSWTPQGVGGGDPRGF 326
P Q H D PP P +PP + P +G
Sbjct: 403 PPYMQPPPRH--DSYYPP-----------------PEMRQPPMEKQ--PH-------QGI 434
Query: 327 DASSGFTPRNRPVESGNHAAILTSTTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVV 386
A P N V S + T ++ IP Y V G + SN+S+ R++SGA V +
Sbjct: 435 SAYGREPPMNVHVSSAP-PMVAQQVTQQMQIPLSYADAVIGTSGSNISYTRRLSGATVTI 493
Query: 387 NDPKPGATEGVVMVSGTSDQMRAAQSLIHAFI 418
+ + E V VSGT Q++ A LI F+
Sbjct: 494 QETRGVPGEMTVEVSGTGSQVQTAVQLIQNFM 525
>gi|61661324|gb|AAX51268.1| FLK [Arabidopsis thaliana]
gi|61661326|gb|AAX51269.1| FLK [Arabidopsis thaliana]
Length = 577
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 122/392 (31%), Positives = 177/392 (45%), Gaps = 48/392 (12%)
Query: 37 TVGGRNRMF--YEEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEE 94
TVGG + + + E VF++L KVGS+IG+ G +++ ET A IKI D P + E
Sbjct: 172 TVGGEEKRWPGWPGETVFRMLVPAQKVGSIIGRKGDVIKKIVEETRARIKILDGPPGTTE 231
Query: 95 RIVVISARENSEMRHSPAQDAVMRVHSRIAE-IGFEPGQA-----VVARLLVHSQQIGCL 148
R V++S +E E P+ D ++RVH RI + + E QA V RLLV + Q G L
Sbjct: 232 RAVMVSGKEEPESSLPPSMDGLLRVHMRIVDGLDGEASQAPPPSKVSTRLLVPASQAGSL 291
Query: 149 LGRGGHIVSEMRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRE 208
+G+ G V ++ A+ +RV + P D +V+V+G SV AL I S LR+
Sbjct: 292 IGKQGGTVKAIQEASACIVRVLGSEDLPVFALQDDRVVEVVGEPTSVHRALELIASHLRK 351
Query: 209 TIFPMKRPGPNNGHSYLPPFP-EMPPPPFRPRHNPASPGSYPSPVGPFHSMDRG-MGPSQ 266
F + R S +P F +M P + H P S+ P G S+ G G +
Sbjct: 352 --FLVDR-------SIIPFFENQMQKPTRQMDHMPPPHQSWGPPQGHAPSVGGGGYGHNP 402
Query: 267 PFDHQAAFSHGMDPMVPPNSDRIPFPYGSERPGHGPTFDRPPSPRSWTPQGVGGGDPRGF 326
P Q H D PP P +PP + P +G
Sbjct: 403 PPYMQPPPRH--DSYYPP-----------------PEMRQPPMEKQ--PH-------QGI 434
Query: 327 DASSGFTPRNRPVESGNHAAILTSTTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVV 386
A P N V S + T ++ IP Y V G + SN+S+ R++SGA V +
Sbjct: 435 SAYGREPPMNVHVSSAP-PMVAQQVTQQMQIPLSYADAVIGTSGSNISYTRRLSGATVTI 493
Query: 387 NDPKPGATEGVVMVSGTSDQMRAAQSLIHAFI 418
+ + E V VSGT Q++ A LI F+
Sbjct: 494 QETRGVPGEMTVEVSGTGSQVQTAVQLIQNFM 525
>gi|449525363|ref|XP_004169687.1| PREDICTED: KH domain-containing protein At4g18375-like, partial
[Cucumis sativus]
Length = 531
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 61/174 (35%), Positives = 105/174 (60%), Gaps = 4/174 (2%)
Query: 48 EEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEM 107
EE+V ++LC D +G +IGKGG +++ + +GA +++ D D +E I+ IS+ E+ +
Sbjct: 306 EELVVRVLCPFDNIGRVIGKGGGTIKSIRQASGARVEVDDTKRDCDECIITISSFESLDD 365
Query: 108 RHSPAQDAVMRVHSRIAEIGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASI 167
S A + V+ + +I + + G V+ RLL+ S+ IGC++G+ G I++E+R++T A I
Sbjct: 366 LKSMAVETVLLLQEKIND---DEGGTVIMRLLIPSKVIGCIIGKSGSIINEIRKSTRADI 422
Query: 168 RVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKRPGPNNG 221
R+ D+ +C S DE+V+V G V+DAL I RLR+ + G N+
Sbjct: 423 RISKGDKL-KCASSSDELVEVTGKVGCVRDALVQIVLRLRDDALKERDVGHNSA 475
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 102/421 (24%), Positives = 168/421 (39%), Gaps = 102/421 (24%)
Query: 14 PFHQRGYAPGYHSRGYSSGPGHETVGGRNRMFYEEEVVFKLLCHLDKVGSLIGKGGSIVR 73
P+ QR Y ++GY + ++ +E VV+++LC + +GS+IGK G ++
Sbjct: 7 PYGQRDY--NGDNKGY-----KRRITEQDDWVSDELVVYRILCPDEVIGSVIGKSGKVIN 59
Query: 74 TFQNETGASIKIADILPDSEERIVVI----SARENSEMRH--------SPAQDAVMRVHS 121
+ + ET A IK+ D P +++R++ I +E+ E+ AQDA+++VH+
Sbjct: 60 SIRQETRAKIKVVDPFPGAKDRVITIFCFVKDKEDVEVDDEFNDRQTLCAAQDALLKVHA 119
Query: 122 RIAEIGFEPGQ-------AVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQ 174
IA G ++L+ S Q ++G+ G + ++R T SI++ PKD
Sbjct: 120 AIANALASAGDLDRKQRDKEQCQILIPSSQSANVIGKAGSTIKKLRSKTRTSIKISPKDA 179
Query: 175 AP---RCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKRPGPNNGHSYLPPFPEM 231
C D + G V+ ALF I+S + + FP + P + + E
Sbjct: 180 TDPIHSCAMDFDNFAVIAGEPEGVRRALFAISSIMYK--FPPREEIPLDTN-----VNEA 232
Query: 232 PPPPFRPRHNP--ASPGSYPSPVGPFHSMDRGMGPSQPFDHQAAFSHGMDPMVPPNSDRI 289
PP P P ++ G YPS DP++PP S I
Sbjct: 233 PPNIIIPSDVPLYSAGGLYPSA---------------------------DPILPPRS--I 263
Query: 290 PFPYGSERPGHGPTFDRPPSPRSW---------TPQGVGGGDPRGFDASSGFTPRNRPVE 340
P G++ D P S +W P G+ G P
Sbjct: 264 PPMLGAQHVQD--LHDYPESGNAWPLYSSSLPVVPGGISGHPPS---------------- 305
Query: 341 SGNHAAILTSTTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATEGVVMV 400
+ V+ P + V G+ + IRQ SGA V V+D K E ++ +
Sbjct: 306 --------EELVVRVLCPFDNIGRVIGKGGGTIKSIRQASGARVEVDDTKRDCDECIITI 357
Query: 401 S 401
S
Sbjct: 358 S 358
Score = 38.9 bits (89), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 44/88 (50%), Gaps = 10/88 (11%)
Query: 127 GFEPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAPRCGSPHDEIV 186
G P + +V R+L IG ++G+GG + +R+A+GA + V D C DE +
Sbjct: 301 GHPPSEELVVRVLCPFDNIGRVIGKGGGTIKSIRQASGARVEV--DDTKRDC----DECI 354
Query: 187 QVIGNYHSVQDALFHITSRLRETIFPMK 214
I ++ S+ D + S ET+ ++
Sbjct: 355 ITISSFESLDD----LKSMAVETVLLLQ 378
>gi|225445949|ref|XP_002264417.1| PREDICTED: KH domain-containing protein At4g18375 isoform 1 [Vitis
vinifera]
Length = 466
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 113/387 (29%), Positives = 167/387 (43%), Gaps = 71/387 (18%)
Query: 49 EVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMR 108
+ VF+L+ + KVGS+IG+ G +++ ET A I++ D + +RIV+IS RE E
Sbjct: 77 DCVFRLIVPVLKVGSIIGRKGELIKKMCEETRARIRVLDGAVGTSDRIVLISGREEPEAP 136
Query: 109 HSPAQDAVMRVHSRIAEI------GFEPGQAVVA----RLLVHSQQIGCLLGRGGHIVSE 158
SPA DAV+RV R+ + G G A VA RLLV S Q L+G+ G ++
Sbjct: 137 LSPAMDAVIRVFKRVTGLSESEGDGKAYGAAGVAFCSIRLLVASTQAINLIGKQGSLIKS 196
Query: 159 MRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKRPGP 218
++ +TGAS+RV D+ P + + IV++ G VQ AL + LR+ +
Sbjct: 197 IQESTGASVRVLSGDEVPFYAAADERIVELQGEALKVQKALEAVVGHLRKFLVD------ 250
Query: 219 NNGHSYLPPFPEMPPPPF---RPRHNPASP----GSYPSPVGPFHSMDRGMGPSQPFDHQ 271
HS LP F R A G+ + +G +S+ S D +
Sbjct: 251 ---HSVLPLFERTYNATISQDRQSDTWADKSLLHGTSQTGMGSDYSLP-AKRESLYLDRE 306
Query: 272 AAFSHGMDPMVPPNSDRIPFPYGSERPGHGPTFDRPPSPRSWTPQGVGGGDPRGFDASSG 331
H PM YG E HG + R SSG
Sbjct: 307 TQMEHSGLPM-----------YGQE---HGLSGIR----------------------SSG 330
Query: 332 FTPRNRPVESGNHAAILTSTTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKP 391
P I+T + IP Y + G +N+++IR+ SGA + V + +
Sbjct: 331 LGRAGAP--------IVTQIAQTMQIPLSYAEDIIGIGGANIAYIRRTSGAILTVQESRG 382
Query: 392 GATEGVVMVSGTSDQMRAAQSLIHAFI 418
E V + GTS Q++ AQ LI FI
Sbjct: 383 LPDEITVEIKGTSSQVQTAQQLIQEFI 409
>gi|255551350|ref|XP_002516721.1| Poly(rC)-binding protein, putative [Ricinus communis]
gi|223544094|gb|EEF45619.1| Poly(rC)-binding protein, putative [Ricinus communis]
Length = 537
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 67/159 (42%), Positives = 102/159 (64%), Gaps = 2/159 (1%)
Query: 49 EVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMR 108
E K+LC K+G +IGKGGS V+ Q +TGASI + D +S+ER++ +SA E
Sbjct: 312 EFSMKILCSAGKIGGVIGKGGSNVKVVQQDTGASIHVEDASAESDERVIRVSASEALWNP 371
Query: 109 HSPAQDAVMRVHSRIAEIGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIR 168
S DA++++ ++ ++ F + RLLV S ++GC+LG+GG +++EMRR T A IR
Sbjct: 372 RSQTIDAILQLQNKTSD--FSEKGTITTRLLVPSSKVGCILGQGGQVINEMRRRTQADIR 429
Query: 169 VFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLR 207
V+ KD+ P+C S +E+VQ+ G + +DAL I SRLR
Sbjct: 430 VYSKDEKPKCASEDEELVQISGKFGVAKDALAEIASRLR 468
Score = 104 bits (260), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 86/253 (33%), Positives = 127/253 (50%), Gaps = 38/253 (15%)
Query: 49 EVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISAR------ 102
+ V+++LC K+G +IGKGG I++ + ET A I +AD +P S+ER+++I +
Sbjct: 44 DTVYRILCPSRKIGGVIGKGGGIIKGLREETQAKITVADPVPGSDERVIIIYSSPEKISR 103
Query: 103 ----------ENSEMRHSP---AQDAVMRVHSRIAEIGFEPGQA---------VVARLLV 140
EN + P AQDA+++VH RI E G V ARLLV
Sbjct: 104 NHNDHEDLTMENEQDIMEPYCAAQDALLKVHDRIVEEDLFGGMTSDDDNENGFVTARLLV 163
Query: 141 HSQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALF 200
+ +GCLLG+ G ++ +R TGA+IRV P D P C DE+VQ+ + AL+
Sbjct: 164 PNNMVGCLLGKRGDVIQRLRSETGANIRVLPADHLPTCAMSTDELVQISAKPDVAKKALY 223
Query: 201 HITSRLRET---IFPMKRPGPNNGHSYLP---PFPEMPP--PPFRPRHNPASPGSYPSPV 252
+++ L + P P P +G S+ P P +PP P P HN +S P P+
Sbjct: 224 EVSTLLHQNPRKDKPPSVPMPYSGQSFHPPGGPMKNLPPLGSPMWPHHN-SSHSIPPMPI 282
Query: 253 -GPFHSMDRGMGP 264
G + S G GP
Sbjct: 283 MGRYGSQSSGFGP 295
>gi|384248562|gb|EIE22046.1| hypothetical protein COCSUDRAFT_43031 [Coccomyxa subellipsoidea
C-169]
Length = 243
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 58/144 (40%), Positives = 92/144 (63%), Gaps = 3/144 (2%)
Query: 47 EEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSE 106
+ E V++LL KVGS+IGK G+IV+ ++ETGA I++ + +P+ +ER++VISAR ++
Sbjct: 100 QTETVYRLLVQSKKVGSVIGKAGTIVKAIRDETGARIRVVEGVPNCDERVIVISARSDAA 159
Query: 107 MRHSPAQDAVMRVHSRI---AEIGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRAT 163
AQ+A+ +VH+R+ E P R+LV Q GCL+G+ G I+ E+R A+
Sbjct: 160 RHTDAAQEALFKVHARVHEHEEGPHPPPANATTRMLVCHTQAGCLIGKAGAIIKEIREAS 219
Query: 164 GASIRVFPKDQAPRCGSPHDEIVQ 187
GA I++ P + P CG +D +VQ
Sbjct: 220 GAHIKILPAEDLPPCGLSNDRVVQ 243
>gi|224123476|ref|XP_002319087.1| predicted protein [Populus trichocarpa]
gi|222857463|gb|EEE95010.1| predicted protein [Populus trichocarpa]
Length = 392
Score = 121 bits (304), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 116/387 (29%), Positives = 171/387 (44%), Gaps = 71/387 (18%)
Query: 54 LLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMRHSPAQ 113
+L KVGS+IG+ G ++ ET A IKI D P + ER V++SA+E + PA
Sbjct: 1 MLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMVSAKEEPDSSLPPAM 60
Query: 114 DAVMRVHSRIAEIGFEP---------GQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATG 164
D ++RVH RI + G + G V RLLV + Q G L+G+ G V ++ A+
Sbjct: 61 DGLLRVHKRIID-GLDSDSSNTPPTSGAKVSTRLLVPASQAGSLIGKQGGTVKSIQEAST 119
Query: 165 ASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETI--------FPMKRP 216
+RV + P D +V+V+G V A+ I S LR+ + F M+
Sbjct: 120 CIVRVLGAEDLPVFALQDDRVVEVLGEAAGVHKAVELIASHLRKFLVDRSIIPLFEMQMQ 179
Query: 217 GPNNGHSYLPPFPEMPPPPFRPRHNPASPGSYPSPVGPFHSMDRGMGPSQPFDHQAAFSH 276
N P +MPP H P P P+ P H G GP +
Sbjct: 180 MSN------PSMEQMPP------HQSWGP---PQPLPPNH----GGGPG----------Y 210
Query: 277 GMDPMVPPNSDRIPFPYGSERPGHGPTFDRPPSPRSWTPQGV---GGGDPRGFDASSGFT 333
G +P P ++ Y P D PP QG+ G P G ASS
Sbjct: 211 GQNPQYMPPPRQLDNYY--------PPADMPPLMEKQPHQGISAYGREAPMGSHASS--- 259
Query: 334 PRNRPVESGNHAAILTSTTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPK--P 391
+ +++T T ++ IP Y V G +++S+IR+ SGA V + + + P
Sbjct: 260 ------NAQAAPSMITQITQQMQIPLSYADAVIGTAGASISYIRRASGATVTIQETRGVP 313
Query: 392 GATEGVVMVSGTSDQMRAAQSLIHAFI 418
GA V +SGT+ Q++ AQ LI F+
Sbjct: 314 GAM--TVEISGTASQVQTAQQLIQNFM 338
>gi|168018585|ref|XP_001761826.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162686881|gb|EDQ73267.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 355
Score = 121 bits (304), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 110/388 (28%), Positives = 173/388 (44%), Gaps = 77/388 (19%)
Query: 51 VFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMRHS 110
VF+L+ + KVG +IG+ G V+ ET + IKI + +P + ERIV++SARE+ E S
Sbjct: 11 VFRLIVPVQKVGGIIGRKGEFVKRMCEETRSRIKILEGVPGTAERIVMVSAREDPEAAIS 70
Query: 111 PAQDAVMRVHSRIAEIGFEPGQA----------VVARLLVHSQQIGCLLGRGGHIVSEMR 160
PA + ++RVH R+ E G EP A V +RLLV + Q G L+GR G + ++
Sbjct: 71 PAMEGLLRVHRRVIE-GAEPESADAEIAPGGAPVSSRLLVAATQAGSLIGRQGATIKSIQ 129
Query: 161 RATGASIRVFP-KDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRET--------IF 211
++GA++RV P ++ P C D +V+V G +VQ A + + LR+ +F
Sbjct: 130 DSSGATVRVLPAAEELPLCALADDRVVEVTGEPRNVQRATELVVAHLRKFLVDRSVLPLF 189
Query: 212 PMKRPGPN--NGHSYLPPFPEMPPPPFRPRHNPASPGS--YPSPVGPFHSMDRGMGPSQP 267
+ R N N S + + + N +S S Y + P HS P Q
Sbjct: 190 ELNRAVANQSNQQSTASQWQQPSSTQQQQPPNYSSNDSSYYGAAELPHHSQ-----PQQQ 244
Query: 268 FDHQAAFSHGMDPMVPPNSDRIPFPYGSERPGHGPTFDRPPSPRSWTPQGVGGGDPRGFD 327
A HG+ YG + P G T PP+P
Sbjct: 245 SHDLANHHHGLS------------LYGRD-PTLGGTI-VPPTP----------------- 273
Query: 328 ASSGFTPRNRPVESGNHAAILTSTTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVN 387
A ++T T + IP Y + G +N+S++R+ SGA + +
Sbjct: 274 -----------------APVITQVTQHMQIPLSYADAIIGGAGANISYMRRTSGATITIQ 316
Query: 388 DPKPGATEGVVMVSGTSDQMRAAQSLIH 415
+ + E V + G++ Q++ AQ LI
Sbjct: 317 ETRSVPGEMTVEIHGSASQVQTAQQLIQ 344
>gi|297792661|ref|XP_002864215.1| hypothetical protein ARALYDRAFT_495374 [Arabidopsis lyrata subsp.
lyrata]
gi|297310050|gb|EFH40474.1| hypothetical protein ARALYDRAFT_495374 [Arabidopsis lyrata subsp.
lyrata]
Length = 652
Score = 121 bits (303), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 57/167 (34%), Positives = 103/167 (61%), Gaps = 1/167 (0%)
Query: 45 FYEEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISAREN 104
Y EE+VF++LC DK+ ++G+ I+ QNE G ++++D + S+E+I+ IS+ E
Sbjct: 320 VYTEELVFQILCPADKIVRVVGESQGILDLLQNEIGVDVRVSDPVTGSDEQIITISSEEA 379
Query: 105 SEMRHSPAQDAVMRVHSRIAEIGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATG 164
+ PAQ+A++ + ++I ++ + + RLLV S+ CL G+ G VSE+ R TG
Sbjct: 380 PDDPFFPAQEALLHIQTQIIDLLPDKDNLITTRLLVSSRDSVCLEGKAGS-VSEISRLTG 438
Query: 165 ASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIF 211
S+++ +++ PRC S +D ++Q+ G+ + +DAL +T LR +F
Sbjct: 439 TSVQILAREEIPRCASINDVVIQITGDIRAARDALVELTLLLRSHMF 485
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 70/183 (38%), Positives = 107/183 (58%), Gaps = 25/183 (13%)
Query: 52 FKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISA--RENSEMR- 108
+++LCH K G +IGK G+I+++ + TGA I + +++P ERI+ IS R + + R
Sbjct: 71 YRILCHDAKAGGVIGKSGTIIKSIRQHTGAWINVHELVPGDVERIIEISDNRRRDPDGRM 130
Query: 109 --HSPAQDAVMRVHSRIAEI-------GFEPGQ------------AVVARLLVHSQQIGC 147
SPAQ+A+ VH RI E G +P + VV RL+V +GC
Sbjct: 131 PSFSPAQEALFNVHDRILESEPQFGYGGAQPEEEEDYGGVRPGGGRVVTRLVVSRMHVGC 190
Query: 148 LLGRGGHIVSEMRRATGASIRVFPKD-QAPRCGSPHDEIVQVIGNYHSVQDALFHITSRL 206
LLG+GG I+ +MR T IR+ P++ PRC S +EIVQ++G +V++AL ++SRL
Sbjct: 191 LLGKGGKIIEQMRIETKTHIRILPRESNLPRCVSLSEEIVQIVGELSAVKNALLIVSSRL 250
Query: 207 RET 209
RE+
Sbjct: 251 RES 253
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 52/83 (62%), Gaps = 1/83 (1%)
Query: 338 PVESGNHAA-ILTSTTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATEG 396
PV + A ++T +T+EVV+P+ + + ++ + L+ I + SGA+V + + +P T+
Sbjct: 563 PVTTSRMAVPLVTRSTLEVVLPEAVVPKLVTKSRNKLAQISEWSGASVTLVEDRPEETQN 622
Query: 397 VVMVSGTSDQMRAAQSLIHAFIL 419
++ +SGT +Q AQSL+ FIL
Sbjct: 623 IIRISGTPEQAERAQSLLQGFIL 645
>gi|255561873|ref|XP_002521945.1| Poly(rC)-binding protein, putative [Ricinus communis]
gi|223538749|gb|EEF40349.1| Poly(rC)-binding protein, putative [Ricinus communis]
Length = 548
Score = 121 bits (303), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 115/385 (29%), Positives = 170/385 (44%), Gaps = 57/385 (14%)
Query: 49 EVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMR 108
E VF++L KVGS+IG+ G ++ ET A IKI D P + ER V++SA+E +
Sbjct: 151 ESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMVSAKEEPDSA 210
Query: 109 HSPAQDAVMRVHSRIAEIGFE---------PGQAVVARLLVHSQQIGCLLGRGGHIVSEM 159
PA D ++RVH RI + G + G V RLLV + Q G L+G+ G V +
Sbjct: 211 LPPAMDGLLRVHKRIVD-GLDGDSSHASSGTGTKVSTRLLVPASQAGSLIGKQGGTVKSI 269
Query: 160 RRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKRPGPN 219
+ A+ +RV + P D +V+V+G+ V A+ I S LR+ F + R
Sbjct: 270 QEASSCVVRVLGAEDLPVFALQDDRVVEVLGDAAGVHKAVELIASHLRK--FLVDR---- 323
Query: 220 NGHSYLPPFP---EMPPPPFRPRHNPASPGSYPSPVGPFHSMDRGMGPSQPFDHQAAFSH 276
S +P F +M PP P P + P + G GP
Sbjct: 324 ---SIIPLFEMHMQMQNPPHMEHMPPHQSWGPPQGIPP----NAGGGPGYG--------- 367
Query: 277 GMDPMVPPNSDRIPFPYGSERPGHGPTFDRPPSPRSWTPQGV---GGGDPRGFDASSGFT 333
+P P +I Y P D PP QG+ G P G SS
Sbjct: 368 --NPQYMPPPRQIENYY--------PPADLPPPMEKQPHQGISAYGREAPMGVHGSS--- 414
Query: 334 PRNRPVESGNHAAILTSTTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGA 393
S +++T T ++ IP Y V G +++S+IR+ SGA V + + +
Sbjct: 415 ------NSQAAPSMITQITQQMQIPLSYADAVIGTAGTSISYIRRASGATVTIQETRGVP 468
Query: 394 TEGVVMVSGTSDQMRAAQSLIHAFI 418
E V +SGT+ Q++ AQ LI F+
Sbjct: 469 GEMTVEISGTASQVQTAQQLIQNFM 493
>gi|147853553|emb|CAN81693.1| hypothetical protein VITISV_009249 [Vitis vinifera]
Length = 543
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 114/436 (26%), Positives = 186/436 (42%), Gaps = 91/436 (20%)
Query: 48 EEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVI--SARE-- 103
E+ V++ LC + K+GS+IG+GG I + ++ET ++I+I + +P EER+V I S+ E
Sbjct: 41 EDTVYRYLCPVRKIGSIIGRGGDIAKQLRSETKSNIRIGETMPGCEERVVTIYSSSEETN 100
Query: 104 ---NSEMRHSPAQDAVMRVHSRI------AEIGFEPGQAVVARLLVHSQQIGCLLGRGGH 154
++ SPAQDA+ RVH RI A+ E Q V R+LV S QIGC++G+GG
Sbjct: 101 PFGDTGELVSPAQDALFRVHDRIVAGELPADEEPEEAQQVTVRMLVPSDQIGCVIGKGGQ 160
Query: 155 IVSEMRRATGASIRVFPKDQAPRCGSPHDEIV------------QVIGNYHSVQDALFHI 202
++ +R T A IR+ + P C DE++ Q+IG+ V+ AL +
Sbjct: 161 VIQNIRSETRAQIRILKDEHLPPCALSSDELLQAFGNVFWALTSQIIGDASVVRKALHQL 220
Query: 203 TSRLRE----TIFPMKRPGPN---NGHSYLPPFPEMPPPPFRPRHNPASPGSYPSPVG-- 253
SRL E + + PN +G +++ P + P P S G Y G
Sbjct: 221 ASRLHENPSRSQHLLLSSSPNMYQSGGTFMTPNIDAPLVGVAPLM--GSYGGYKGDTGDW 278
Query: 254 --PFHSMDRGMGPSQPFD-------------------------HQAAFSHGMDPMVPPNS 286
++S R ++ F ++ S +D
Sbjct: 279 SHSYYSARRDESSAKEFSLRLVCPTGNIGGVIGKGGGIIKQIRQESGASIKVDSSSAEGD 338
Query: 287 DRIPFPYGSERPGHGPTFDRPPSPRSWTPQGVGGGDPRGFDASSGFTPRNRPVESGNHAA 346
D I F E F PSP DA+ PR E +
Sbjct: 339 DCIIFISAKE-------FFEDPSPT--------------IDAALRLQPRCS--EKAERES 375
Query: 347 ILTSTTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVV----NDPKPGATEGVVMVSG 402
+ T +++P + + G+ + +S +R ++ AN+ + N PK A+E MV
Sbjct: 376 SDSVVTTRLLVPSSRIGCLIGKGGAIISEMRSVTRANIRILSKENLPKV-ASEDDEMVQI 434
Query: 403 TSDQMRAAQSLIHAFI 418
T + A+ +L+ +
Sbjct: 435 TGELNVASNALLQVTL 450
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 70/187 (37%), Positives = 106/187 (56%), Gaps = 3/187 (1%)
Query: 27 RGYSSGPGHETVGGRNRMFYEEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIA 86
+G + H R +E +L+C +G +IGKGG I++ + E+GASIK+
Sbjct: 272 KGDTGDWSHSYYSARRDESSAKEFSLRLVCPTGNIGGVIGKGGGIIKQIRQESGASIKVD 331
Query: 87 DILPDSEERIVVISARENSEMRHSPAQDAVMRVHSRIAEIG-FEPGQAVVA-RLLVHSQQ 144
+ ++ I+ ISA+E E SP DA +R+ R +E E +VV RLLV S +
Sbjct: 332 SSSAEGDDCIIFISAKEFFE-DPSPTIDAALRLQPRCSEKAERESSDSVVTTRLLVPSSR 390
Query: 145 IGCLLGRGGHIVSEMRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITS 204
IGCL+G+GG I+SEMR T A+IR+ K+ P+ S DE+VQ+ G + +AL +T
Sbjct: 391 IGCLIGKGGAIISEMRSVTRANIRILSKENLPKVASEDDEMVQITGELNVASNALLQVTL 450
Query: 205 RLRETIF 211
RL+ +F
Sbjct: 451 RLKANLF 457
>gi|255554418|ref|XP_002518248.1| Poly(rC)-binding protein, putative [Ricinus communis]
gi|223542595|gb|EEF44134.1| Poly(rC)-binding protein, putative [Ricinus communis]
Length = 451
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 108/382 (28%), Positives = 180/382 (47%), Gaps = 59/382 (15%)
Query: 49 EVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMR 108
+ VF+L+ + KVGS+IG+ G +++ +ET A I++ D + +R+V+IS +E+ E
Sbjct: 60 DCVFRLIVPVLKVGSIIGRKGDLIKKMCDETRARIRVLDAPIGTPDRVVLISGKEDVEAP 119
Query: 109 HSPAQDAVMRVHSRIAEI----GFEPGQAVVA----RLLVHSQQIGCLLGRGGHIVSEMR 160
SPA DAV+RV R++ + E G A +A RLLV S Q L+G+ G I+ ++
Sbjct: 120 LSPAMDAVIRVFKRVSGLPEGNAQELGAAGIAFSSIRLLVASTQAINLIGKQGSIIKSIQ 179
Query: 161 RATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKRPGPNN 220
+TGAS+RV +++ P + + IV + G V +AL I LR+ +
Sbjct: 180 ESTGASVRVLSENEVPFYVATDERIVDLQGEAMKVLEALEAIVGHLRKFLV--------- 230
Query: 221 GHSYLPPFPEMPPPPFRPRHNPASPGSYPSPVGPFHSMDRGMGPSQPFDHQAAF---SHG 277
HS LP F + +Y + + S+DR ++ + +++F S G
Sbjct: 231 DHSVLPLFEK----------------NYNALI----SLDR---QAETWSDRSSFHTTSQG 267
Query: 278 -MDPMVPPNSDRIPFPYGSERPGHGPTFDRPPSPRSWTPQGVGGGDPRGFDASSGFTPRN 336
+D P + R E P P S S + G DP S R
Sbjct: 268 RIDIDYPLSGKRDALLLERETPFESQV---PLSRIS-----LYGQDPAISSVRSSVFNR- 318
Query: 337 RPVESGNHAAILTSTTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATEG 396
+ I+T T + +P Y + G +N+ +IR+ SGA + VN+ + E
Sbjct: 319 ------SSVPIVTQVTQTMQVPISYAEEIIGIRGNNIEYIRRTSGAIITVNESRGLPDEI 372
Query: 397 VVMVSGTSDQMRAAQSLIHAFI 418
+V + GT+ +++ AQ LI F+
Sbjct: 373 IVEIKGTASEVQMAQQLIQEFL 394
>gi|147817258|emb|CAN62067.1| hypothetical protein VITISV_030085 [Vitis vinifera]
Length = 288
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 69/184 (37%), Positives = 102/184 (55%), Gaps = 43/184 (23%)
Query: 49 EVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISA------- 101
+V+F++LC K G +IGKGG+I+R F+ +TGA I+I D + +ER+++I A
Sbjct: 99 QVLFRILCPATKTGGVIGKGGAIIRQFREDTGAKIRIDDSVLGCDERVILIVADAVKSKR 158
Query: 102 -------------RENSEMRHS-------------PAQDAVMRVHSRIAEIGFEPGQ--- 132
E++ +R+S PAQ A++RV RI ++ E +
Sbjct: 159 EASAICGAEANDGEESANLRNSSPNPVAVDDDESSPAQQALVRVFERILKVDEEREEKEK 218
Query: 133 -------AVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAPRCGSPHDEI 185
AV RLL S Q+GC+LGRGG IV ++R+ +GA IRV PKD P C SP DE+
Sbjct: 219 KEDLGNVAVCCRLLAPSNQVGCVLGRGGKIVEKIRQESGAQIRVLPKDHIPACASPGDEL 278
Query: 186 VQVI 189
+QV+
Sbjct: 279 IQVV 282
>gi|297806983|ref|XP_002871375.1| hypothetical protein ARALYDRAFT_325507 [Arabidopsis lyrata subsp.
lyrata]
gi|297317212|gb|EFH47634.1| hypothetical protein ARALYDRAFT_325507 [Arabidopsis lyrata subsp.
lyrata]
Length = 525
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 62/171 (36%), Positives = 106/171 (61%), Gaps = 6/171 (3%)
Query: 47 EEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSE 106
+++VV K+LC +++G +IG G + +R Q+ETGA I + D +E + I+A E+
Sbjct: 272 KQQVVLKILCSKERIGRVIGNGRATIRDLQSETGAFITLGSNRLDCDEGLFTITASEDPN 331
Query: 107 MRHSPAQDAVMRVHSRIAE------IGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSEMR 160
++SP+Q A++ V S++ E + ++ ARL+V S QI CL+G GHI S ++
Sbjct: 332 AKNSPSQRALVLVFSKMYENTTAKVLDSGLTSSITARLVVRSNQINCLMGEEGHIKSTIQ 391
Query: 161 RATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIF 211
+ TGA I V +Q P+C S +++IVQ+ G + +V++A+ +TS LRE +
Sbjct: 392 QRTGAFITVLNVEQNPKCVSENNQIVQISGAFPNVKEAINQVTSMLREDLI 442
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 101/205 (49%), Gaps = 29/205 (14%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMR- 108
V+F++L H+ +VG +IGK G ++R + T + I + DS R++ I A S R
Sbjct: 24 VLFRILGHVSQVGDVIGKDGRVIRQLKESTNSQIWVEKAPLDSLYRVITIIADVGSTSRV 83
Query: 109 -----------------------HSPAQDAVMRVHSRIAEIGFEPGQAVVARLLVHSQQI 145
S AQ A++RV + + F V +RLL+ + +
Sbjct: 84 KLGVIVNNASNRKKEEVQEQEVEVSRAQGALIRVFEAL-NVRFGTSSTVSSRLLMEACHV 142
Query: 146 GCLLGRGGHIVSEMRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSR 205
++G+GG ++ +R+ TG ++ + + P C P D +V++ GN +V+ L I+SR
Sbjct: 143 VTVIGKGGELMEMIRKETGCNVEICQYN-LPSCADPDDVMVKIEGNVFAVKKVLVSISSR 201
Query: 206 LR--ETIFPMKRPG-PNNGHSYLPP 227
L+ ++IF K G P+N + + P
Sbjct: 202 LQACQSIFKKKMVGNPHNMQTNVVP 226
>gi|255574127|ref|XP_002527979.1| Poly(rC)-binding protein, putative [Ricinus communis]
gi|223532605|gb|EEF34391.1| Poly(rC)-binding protein, putative [Ricinus communis]
Length = 416
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 106/382 (27%), Positives = 171/382 (44%), Gaps = 52/382 (13%)
Query: 51 VFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMRHS 110
V++L+ + KVGS+IG+ G +++ ET A I+I D P +RIV+IS +E E S
Sbjct: 28 VYRLIVPVAKVGSIIGRKGELIKKMCVETRARIRILDGPPSISDRIVLISGKEEPEAALS 87
Query: 111 PAQDAVMRVHSRIAEIGFEPGQA-----VVA-------RLLVHSQQIGCLLGRGGHIVSE 158
PA DAV+RV R++ G G+A VA +LLV S Q L+G+ G +
Sbjct: 88 PAMDAVLRVFKRVS--GLSAGEADAMGSAVAGAAFSSVKLLVASSQAINLIGKQGSTIKS 145
Query: 159 MRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKRPGP 218
++ +T A++RV +++AP + + IV++ G V AL + +LR+ +
Sbjct: 146 IQESTAATVRVLAEEEAPSYATSDERIVEIHGEASKVLKALEGVIGQLRKFLVD------ 199
Query: 219 NNGHSYLPPFPEMPPPPFRPRHNPASPGSYPSPVGP-FHSMDRGMGPSQPFDHQAAFSHG 277
H+ +P F + + + P P ++ P + + S
Sbjct: 200 ---HTVVPIFEKTHNAIISQDRSADARADKTQPSIPSLTALHSAPAPQVGIGSEYSLSLK 256
Query: 278 MDPMVPPNSDRIPFPYGSERPGHGPTFDRPPSPRSWTPQGVGGGDPRGFDASSGFTPRNR 337
DP + +DR PQ G G D+S G R
Sbjct: 257 RDPSI---------------------YDRESHLDQKIPQ--SGLLLFGQDSSLGGL---R 290
Query: 338 PVESGNHAA-ILTSTTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATEG 396
P G AA I+T T + +P Y + G SN+++IR+ SGA + + + + E
Sbjct: 291 PTGLGRAAAPIVTQMTQTMQVPLSYAEDIIGVGGSNIAYIRRTSGAILTIQESRT-PDEI 349
Query: 397 VVMVSGTSDQMRAAQSLIHAFI 418
V + GT+ Q++ AQ LI FI
Sbjct: 350 TVEIKGTASQVQMAQQLIQEFI 371
>gi|384253488|gb|EIE26963.1| hypothetical protein COCSUDRAFT_59455 [Coccomyxa subellipsoidea
C-169]
Length = 648
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 64/185 (34%), Positives = 101/185 (54%), Gaps = 1/185 (0%)
Query: 24 YHSRGYSSGPGHETVGGRNRMFYEEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASI 83
RG S G R V ++LLC ++G++IGKGGS+++ ++ TGA I
Sbjct: 5 VRKRGRHSDDVQMEAGVVKRSAAGAMVEYRLLCPATRIGTVIGKGGSVIQQMRDSTGARI 64
Query: 84 KIADILPDSEERIVVISARENSEMRHSPAQDAVMRVHSRIAEI-GFEPGQAVVARLLVHS 142
K+ + ER++ +S+ + AQ+A+ V SR++E + V R+LV
Sbjct: 65 KVEPEVAGCSERLISLSSSDEPGAELCRAQEALFAVQSRLSEADAAQEDTCCVVRMLVEQ 124
Query: 143 QQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHI 202
Q+GC+LG+GG ++S++RR TGA+IRV K P C D +V V G +V DAL +
Sbjct: 125 AQVGCVLGKGGEVISDLRRRTGANIRVSDKRDLPACAGSEDSLVAVKGEAQAVSDALRQL 184
Query: 203 TSRLR 207
++ LR
Sbjct: 185 SALLR 189
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 100/421 (23%), Positives = 172/421 (40%), Gaps = 100/421 (23%)
Query: 49 EVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKI------ADILPDSE----ERIVV 98
EV +LL +G +IG+ G ++RT +++TGA IK+ A P SE +R++
Sbjct: 266 EVQLRLLVPATHIGCVIGRRGEMIRTIRDDTGAHIKVHEGSQGARAFPPSEKKGVDRVIT 325
Query: 99 ISARENSEMRHSPAQDAV-MRVHSRIAEIGFEPGQAVVARLLVHS-----------QQIG 146
++A E + SP ++AV + + G P + R+LV + Q+G
Sbjct: 326 VAAAEAAGAAVSPTEEAVCLMALCLLGPSGLPPVPCI--RILVPTPQGGTAEALSLLQVG 383
Query: 147 CLLGRGGHIVSEMRRATGASIRVFPKDQAPRCGSPHD-------EIVQVIGNYHSVQDAL 199
+LG+GG ++++R+ +GA +R+ P + P D ++VQ+ G + A+
Sbjct: 384 GVLGKGGATITQVRKDSGAGVRLVPLEAEDDRWLPRDVAAGQMHKVVQIEGPITATVKAV 443
Query: 200 FHITSRLR------ETIFPMKRPGPNNGHSYLPP---------FPEMPPPPFRPRHNP-- 242
+ ++LR + P + G ++ P P P R R P
Sbjct: 444 RAVCAQLRAWQARSQGAQPARELTEAYGGAHAPQQFHPMHQAMLPRETAPGLRGRGLPDL 503
Query: 243 --ASPGSYPSPVGPFHSMDRGMGPSQPFDHQAAFSHGMDPMVPPNSDRIPFPYGSERPGH 300
A G Y SP+ H + P D Q MD
Sbjct: 504 SRAEMGMYDSPL--RHCERPVLQLRHPLDLQVLSRGQMD--------------------- 540
Query: 301 GPTFDRPPSPRSWTPQGVGGGDPRGFDASSGFTPRNRPVESGNHAAILTSTTIEVVIPQL 360
+P + T Q V D + + E+ + +
Sbjct: 541 -RAMSQPLMMQQVTQQVVTAPD--------------------------QTQSCELRLVGV 573
Query: 361 YMAHVYGENNSNLSHIRQISGANVVVNDPKPGATEGVVMVSGTSDQMRAAQSLIHAFILC 420
+ V G+ N++ IR+ISGA V ++D G TE ++ +SGT +Q++AA +L+ AF+L
Sbjct: 574 QVGCVLGKAGENITQIRKISGARVKLSDAPRGVTERLLRLSGTCEQVQAAVNLVQAFLLA 633
Query: 421 G 421
G
Sbjct: 634 G 634
Score = 41.2 bits (95), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 43/84 (51%), Gaps = 11/84 (13%)
Query: 131 GQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAPRCGSPHDEIVQVI- 189
G V RLL + +IG ++G+GG ++ +MR +TGA I+V P+ + ++ +
Sbjct: 28 GAMVEYRLLCPATRIGTVIGKGGSVIQQMRDSTGARIKVEPE-----VAGCSERLISLSS 82
Query: 190 -----GNYHSVQDALFHITSRLRE 208
Q+ALF + SRL E
Sbjct: 83 SDEPGAELCRAQEALFAVQSRLSE 106
>gi|148907101|gb|ABR16694.1| unknown [Picea sitchensis]
Length = 490
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 104/378 (27%), Positives = 171/378 (45%), Gaps = 48/378 (12%)
Query: 49 EVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMR 108
E VF++L KVG +IG+ G V+ ET + IKI D L + ER+V++SA+E +
Sbjct: 49 ENVFRMLVPSQKVGGIIGRKGEFVKKMCEETRSRIKILDGLSGTPERVVMVSAKEEPDAT 108
Query: 109 HSPAQDAVMRVHSRIAEIGFEPGQA-------VVARLLVHSQQIGCLLGRGGHIVSEMRR 161
SPA D +++VH RI E E G+ + RLL+ Q G L+G+ G + ++
Sbjct: 109 ISPAMDGILKVHKRIIEGIDEVGRTQQAAGGPTITRLLLAGIQSGSLIGKQGATIKSIQE 168
Query: 162 ATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKRPGPNNG 221
+G + +V + P C D+++++ G +V AL + S LR+ F + R
Sbjct: 169 NSGVAAKVVGSEDIPYCALADDKVLEIQGEPANVHKALELVVSHLRK--FLVDR------ 220
Query: 222 HSYLPPFPEMPPPPFRPRHNPASPGSYPSPVGPFHSM-DRGMGPSQPFDHQAAFSHGMDP 280
S LP + EM + P S+ + G G F + + ++ P
Sbjct: 221 -SVLPMY-EMNMSKTNQSQMEQNLSHQPWSHNQTSSLPNSGSG----FGNNSKYT----P 270
Query: 281 MVPPNSDRIPFPYGSERPGHGPTFDRPPSPRSWTPQGVGGGDPRGFDASSGFTPRNRPVE 340
PP+ + + P+ D PP S + G DP G + P
Sbjct: 271 TAPPHDNY-----------YAPS-DLPPETHSHHGLNMYGRDPLGGHSVPNAAP------ 312
Query: 341 SGNHAAILTSTTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATEGVVMV 400
A ++T + + IP Y V G N +N+S+ R+ SGA + + + + E V +
Sbjct: 313 ----APVITQVSQRMQIPLSYADAVIGTNGANISYCRRNSGAIITIEETRGVPGEMTVEI 368
Query: 401 SGTSDQMRAAQSLIHAFI 418
GT+ Q++ AQ LI F+
Sbjct: 369 HGTASQVQTAQQLIQNFM 386
>gi|297735516|emb|CBI17956.3| unnamed protein product [Vitis vinifera]
Length = 433
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 112/413 (27%), Positives = 180/413 (43%), Gaps = 63/413 (15%)
Query: 25 HSRGYSSGPGHETVGGRNRMFYEEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIK 84
+G + G G GG + E VF++L + KVG +IG+ G ++ ET A IK
Sbjct: 19 EKQGLNDGSG----GGEKWPGWPGENVFRMLIPVQKVGYIIGRKGEHIKKLSEETKARIK 74
Query: 85 IADILPDSEERIVVISARENSEMRHSPAQDAVMRVHSRIAEIGFE----PGQAVVARLLV 140
I D P + ER V++SA+E + +PA D ++RVH I ++ + G V RLLV
Sbjct: 75 ILDGPPGTSERAVMVSAKEEPDAPIAPAIDGLLRVHKCIMDVESDVPSAAGVMVSTRLLV 134
Query: 141 HSQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALF 200
+ Q G L+G+ G + ++ A+ +RV ++ P +D +V++ G SV A+
Sbjct: 135 VAAQAGSLIGKQGATIKSIQEASNCIVRVLGEN-LPLFALQNDTVVEIQGEPASVHKAVE 193
Query: 201 HITSRLRE--------TIFPMKRPGPNN-GHSYLPPFPEMPPPPFRPRHNPASPGSYPSP 251
I S LR+ +F M+ PN G+ +PP P P + PG P+
Sbjct: 194 LIASNLRKFLVDRSVIKVFEMEMQKPNTQGNENMPPQQSWDPSQVFPINTGGEPGFVPN- 252
Query: 252 VGPFHSMDRGMGPSQPFDHQAAFSHGMDPMVPPNSDRIPFPYGSERPGHGPTFDRPPSPR 311
M QP + +D PP + P GP + R
Sbjct: 253 ---LQYM-------QP-------PYQLDNYYPPPAQT---PLDQHHHHQGPPYGRE---- 288
Query: 312 SWTPQGVGGGDPRGFDASSGFTPRNRPVESGNHAAILTSTTIEVVIPQLYMAHVYGENNS 371
T GV +S TP+ +I+ T + +P Y V G +
Sbjct: 289 --TGAGV---------SSPSLTPQQ---------SIVNKITQYMQVPLSYADAVIGASGV 328
Query: 372 NLSHIRQISGANVVVNDPKPGATEGVVMVSGTSDQMRAAQSLIHAFILCGVTS 424
N+S++R+ SGA + + + K E V ++G+ Q++ AQ LI F+ +S
Sbjct: 329 NISYVRRTSGATIAIEETKGVPGEMTVEINGSVSQVQTAQQLIQNFMAEAASS 381
>gi|326530414|dbj|BAJ97633.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 580
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 66/173 (38%), Positives = 108/173 (62%), Gaps = 9/173 (5%)
Query: 48 EEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPD-SEERIVVISARENSE 106
EE ++LC + +G +IG+ G+ VR + +TGA I + ++ D S ER++VIS++E
Sbjct: 65 EEFSIRILCASELIGPVIGRSGANVRQVEQQTGARIVVQELHKDASGERLIVISSKEIPA 124
Query: 107 MRHSPAQDAVMRVHSRI-AEIGFEPGQA-------VVARLLVHSQQIGCLLGRGGHIVSE 158
SP +A++ +HS++ A EP ++ +V RL+V S+++GC+LG GG +++E
Sbjct: 125 DPVSPTIEALILLHSKVSASKVSEPSESEPSGEHKLVTRLVVPSKKVGCILGEGGKVITE 184
Query: 159 MRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIF 211
MRR GA IRV+ K P+ S ++E+VQV G+ ++AL I SRLR+ I
Sbjct: 185 MRRRIGAEIRVYSKADKPKYLSFNEELVQVSGSPDIAREALTEIASRLRDRIL 237
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 46/70 (65%)
Query: 349 TSTTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATEGVVMVSGTSDQMR 408
+S+++E+ IP + V G NL+ IRQISGA + + + +PG++E ++ + G + Q+R
Sbjct: 490 SSSSVELRIPNSSLESVVGAGGVNLAEIRQISGARMKLLEARPGSSESIMEIQGMAHQVR 549
Query: 409 AAQSLIHAFI 418
AQSL+ FI
Sbjct: 550 VAQSLLQGFI 559
>gi|224121400|ref|XP_002330818.1| predicted protein [Populus trichocarpa]
gi|222872620|gb|EEF09751.1| predicted protein [Populus trichocarpa]
Length = 405
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 110/391 (28%), Positives = 172/391 (43%), Gaps = 71/391 (18%)
Query: 51 VFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMRHS 110
VF+L+ L KVGS+IG+ G +V+ +ET A I+I + +RIV+IS +E E S
Sbjct: 12 VFRLIVPLSKVGSIIGRRGELVKKMCDETRARIRILEGPLGISDRIVLISGKEEPEAPQS 71
Query: 111 PAQDAVMRVHSRIAEIGFEPGQA--------------VVARLLVHSQQIGCLLGRGGHIV 156
PA DAVMRV R++ G PG+ RLLV S Q L+G+ G I+
Sbjct: 72 PAMDAVMRVFKRVS--GLSPGEGDNTGSAAAAAGSAFCSIRLLVASSQAINLIGKQGSII 129
Query: 157 SEMRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRE-----TIF 211
++ TGA++ V +D+ P + + IV++ G V AL + +LR+ ++
Sbjct: 130 KSIQENTGAAVHVMAEDELPSYATSDERIVEIHGEAMKVFKALEAVIGQLRKFLVDHSVI 189
Query: 212 PMKRPGPNNGHSYLPPF---PEMPPPPFRPRHNPASPGSYPSPVGPFHSMDRGMGPSQPF 268
P+ N S P P++ P + P + PS + +S+ PS +
Sbjct: 190 PIFEKTYNATISQECPADARPDIAQPSLHSAYVP----TIPSGIASDYSLSFKRDPS-IY 244
Query: 269 DHQAAFSHGMDPMVPPNSDRIPFPYGSERPGHGPTFDRPPSPRSWTPQGVGGGDPRGFDA 328
+H+ F H + +PG + G DP
Sbjct: 245 EHETQFEHKIS-----------------QPG----------------LSIYGQDP----G 267
Query: 329 SSGFTPRNRPVESGNHAA-ILTSTTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVN 387
GF R G AA I+T T + +P Y + G SN+++IR+ S A + +
Sbjct: 268 IVGF----RSTGLGRAAAPIVTQVTQTMQVPLSYAEDIIGVAGSNIAYIRRTSRAILSIQ 323
Query: 388 DPKPGATEGVVMVSGTSDQMRAAQSLIHAFI 418
+ + E V + GT Q++ AQ LI FI
Sbjct: 324 ESRGLPDEITVEIKGTGAQVQMAQQLIQEFI 354
>gi|30696273|ref|NP_200118.3| RNA-binding KH domain-containing protein [Arabidopsis thaliana]
gi|17065220|gb|AAL32764.1| RNA-binding protein-like [Arabidopsis thaliana]
gi|30725478|gb|AAP37761.1| At5g53060 [Arabidopsis thaliana]
gi|332008915|gb|AED96298.1| RNA-binding KH domain-containing protein [Arabidopsis thaliana]
Length = 652
Score = 118 bits (295), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 56/167 (33%), Positives = 102/167 (61%), Gaps = 1/167 (0%)
Query: 45 FYEEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISAREN 104
Y EE+VF++LC DK+ ++G+ I+ QNE G ++++D + S+E+I+ IS+ E
Sbjct: 320 VYSEELVFQILCPADKIVRVVGESQGIIDLLQNEIGVDVRVSDPVAGSDEQIITISSEEA 379
Query: 105 SEMRHSPAQDAVMRVHSRIAEIGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATG 164
+ PAQ+A++ + ++I ++ + + RLLV S+ CL G+ G VSE+ R TG
Sbjct: 380 PDDPFFPAQEALLHIQTQIIDLIPDKDNLITTRLLVPSRDSICLEGKAGS-VSEISRLTG 438
Query: 165 ASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIF 211
S+++ +++ PRC S +D ++Q+ G + ++AL +T LR +F
Sbjct: 439 TSVQILAREEIPRCASINDVVIQITGEIRAAREALVELTLLLRSHMF 485
Score = 117 bits (294), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 69/185 (37%), Positives = 106/185 (57%), Gaps = 25/185 (13%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISA--RENSEM 107
+++LCH K G +IGK G+I+++ + TGA I + +++P ERI+ IS R + +
Sbjct: 68 TTYRILCHDAKAGGVIGKSGTIIKSIRQHTGAWINVHELVPGDAERIIEISDNRRRDPDG 127
Query: 108 R---HSPAQDAVMRVHSRIAEIGFEPG-------------------QAVVARLLVHSQQI 145
R SPAQ+A+ VH RI E + G VV RL+V +
Sbjct: 128 RMPSFSPAQEALFSVHDRILESEAQFGYGGPPPEEEEDYGGVRPGGGRVVTRLVVSRMHV 187
Query: 146 GCLLGRGGHIVSEMRRATGASIRVFPKD-QAPRCGSPHDEIVQVIGNYHSVQDALFHITS 204
GCLLG+GG I+ +MR T IR+ P++ PRC S +EIVQ++G ++V++AL ++S
Sbjct: 188 GCLLGKGGKIIEQMRIETKTHIRILPRESNLPRCVSLSEEIVQIVGELNAVKNALAIVSS 247
Query: 205 RLRET 209
RLRE+
Sbjct: 248 RLRES 252
Score = 57.8 bits (138), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 52/83 (62%), Gaps = 1/83 (1%)
Query: 338 PVESGNHAA-ILTSTTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATEG 396
PV + A ++T +T+EVV+P+ + + ++ + L+ I + SGA+V + + +P T+
Sbjct: 563 PVTTSRMAVPLVTRSTLEVVLPEAVVPKLVTKSRNKLAQISEWSGASVTIVEDRPEETQN 622
Query: 397 VVMVSGTSDQMRAAQSLIHAFIL 419
++ +SGT +Q AQSL+ FIL
Sbjct: 623 IIRISGTPEQAERAQSLLQGFIL 645
>gi|8809595|dbj|BAA97146.1| RNA-binding protein-like [Arabidopsis thaliana]
Length = 660
Score = 118 bits (295), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 56/166 (33%), Positives = 102/166 (61%), Gaps = 1/166 (0%)
Query: 46 YEEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENS 105
Y EE+VF++LC DK+ ++G+ I+ QNE G ++++D + S+E+I+ IS+ E
Sbjct: 321 YSEELVFQILCPADKIVRVVGESQGIIDLLQNEIGVDVRVSDPVAGSDEQIITISSEEAP 380
Query: 106 EMRHSPAQDAVMRVHSRIAEIGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGA 165
+ PAQ+A++ + ++I ++ + + RLLV S+ CL G+ G VSE+ R TG
Sbjct: 381 DDPFFPAQEALLHIQTQIIDLIPDKDNLITTRLLVPSRDSICLEGKAGS-VSEISRLTGT 439
Query: 166 SIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIF 211
S+++ +++ PRC S +D ++Q+ G + ++AL +T LR +F
Sbjct: 440 SVQILAREEIPRCASINDVVIQITGEIRAAREALVELTLLLRSHMF 485
Score = 117 bits (294), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 69/183 (37%), Positives = 106/183 (57%), Gaps = 25/183 (13%)
Query: 52 FKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVIS--ARENSEMR- 108
+++LCH K G +IGK G+I+++ + TGA I + +++P ERI+ IS R + + R
Sbjct: 70 YRILCHDAKAGGVIGKSGTIIKSIRQHTGAWINVHELVPGDAERIIEISDNRRRDPDGRM 129
Query: 109 --HSPAQDAVMRVHSRIAEIGFEPG-------------------QAVVARLLVHSQQIGC 147
SPAQ+A+ VH RI E + G VV RL+V +GC
Sbjct: 130 PSFSPAQEALFSVHDRILESEAQFGYGGPPPEEEEDYGGVRPGGGRVVTRLVVSRMHVGC 189
Query: 148 LLGRGGHIVSEMRRATGASIRVFPKD-QAPRCGSPHDEIVQVIGNYHSVQDALFHITSRL 206
LLG+GG I+ +MR T IR+ P++ PRC S +EIVQ++G ++V++AL ++SRL
Sbjct: 190 LLGKGGKIIEQMRIETKTHIRILPRESNLPRCVSLSEEIVQIVGELNAVKNALAIVSSRL 249
Query: 207 RET 209
RE+
Sbjct: 250 RES 252
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 52/83 (62%), Gaps = 1/83 (1%)
Query: 338 PVESGNHAA-ILTSTTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATEG 396
PV + A ++T +T+EVV+P+ + + ++ + L+ I + SGA+V + + +P T+
Sbjct: 563 PVTTSRMAVPLVTRSTLEVVLPEAVVPKLVTKSRNKLAQISEWSGASVTIVEDRPEETQN 622
Query: 397 VVMVSGTSDQMRAAQSLIHAFIL 419
++ +SGT +Q AQSL+ FIL
Sbjct: 623 IIRISGTPEQAERAQSLLQGFIL 645
>gi|357447239|ref|XP_003593895.1| Heterogeneous nuclear ribonucleoprotein K [Medicago truncatula]
gi|357447243|ref|XP_003593897.1| Heterogeneous nuclear ribonucleoprotein K [Medicago truncatula]
gi|355482943|gb|AES64146.1| Heterogeneous nuclear ribonucleoprotein K [Medicago truncatula]
gi|355482945|gb|AES64148.1| Heterogeneous nuclear ribonucleoprotein K [Medicago truncatula]
Length = 631
Score = 118 bits (295), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 61/167 (36%), Positives = 100/167 (59%), Gaps = 4/167 (2%)
Query: 48 EEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEM 107
EE++ ++LC DK+G LIGKGG ++ + +GA I++ D +E ++ I+A E++
Sbjct: 310 EELIVRMLCPSDKIGQLIGKGGGTIKRMRQASGARIEVDDSKARHDECLITITATESTSD 369
Query: 108 RHSPAQDAVMRVHSRIAEIGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASI 167
S A +AV+ + +I + E V RLLV S+ IGC++GR G I++E+R+ T A I
Sbjct: 370 LKSVAVEAVLLLQEKIND---EDDAPVSIRLLVPSKVIGCIIGRSGAIINEIRKRTKADI 426
Query: 168 RVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMK 214
++ + P+ +DE+V+V+G V+DAL I RLRE + K
Sbjct: 427 QI-SRSNKPKYADDNDELVEVVGEVDCVRDALIQIVLRLREDVLKNK 472
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/263 (26%), Positives = 120/263 (45%), Gaps = 32/263 (12%)
Query: 27 RGYSSGPGHETVGGRNRMFYEEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIA 86
R + + V R+ E + +++LC + +GS+IGK G ++ + + E+ A +K+
Sbjct: 19 RNWDNKNQKRRVNDRDERDKGELIAYRILCPNEVIGSVIGKNGKVINSIRQESRAKVKVV 78
Query: 87 DILPDSEERIVVI------------SARENSEMRHSPAQDAVMRVHSRIAEIGFEPGQAV 134
D P ++ R++ I ++E AQDA+++VHS I+ G +
Sbjct: 79 DPFPGAKHRVITIFCHVKNKEEIEIEDEFDNEKPLCAAQDALIKVHSAISNSIETAGDSE 138
Query: 135 VAR-------LLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAP---RCGSPHDE 184
R +LV S Q L+G+ G + ++R T +I+V PKD A C D
Sbjct: 139 KKRKNKDECQILVPSSQSAILIGKAGATIKQLRVKTRTNIKVVPKDAADPEHSCAMEFDN 198
Query: 185 IVQVIGNYHSVQDALFHITSRL-----RETIFPMKRPGPNNGHSYLPP--FPEMPPPPFR 237
V ++G +V+ ALF +++ + +E I P+ P HS + P P PP
Sbjct: 199 FV-LVGESEAVKRALFAVSTIMYKFSPKEDI-PLDTTVPETPHSIIIPSELPIYPPGGLY 256
Query: 238 PRHNP-ASPGSYPSPVGPFHSMD 259
P +P P S+P +G D
Sbjct: 257 PASDPIVQPRSFPQLIGATTMQD 279
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 50/69 (72%)
Query: 351 TTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATEGVVMVSGTSDQMRAA 410
+T+E+V+P + V G+ +NL++IR+ISGA V +++ K + V ++SGTS++ RAA
Sbjct: 561 STLEMVVPANAVGKVMGKGGANLANIRKISGATVEISESKSYRGDRVALISGTSEEKRAA 620
Query: 411 QSLIHAFIL 419
++LI AFI+
Sbjct: 621 ENLIQAFIM 629
Score = 44.3 bits (103), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 39/75 (52%), Gaps = 6/75 (8%)
Query: 123 IAEIGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAPRCGSPH 182
++ +G + ++ R+L S +IG L+G+GG + MR+A+GA I V D R H
Sbjct: 301 VSSLGASQSEELIVRMLCPSDKIGQLIGKGGGTIKRMRQASGARIEV--DDSKAR----H 354
Query: 183 DEIVQVIGNYHSVQD 197
DE + I S D
Sbjct: 355 DECLITITATESTSD 369
>gi|224115590|ref|XP_002332094.1| predicted protein [Populus trichocarpa]
gi|222874914|gb|EEF12045.1| predicted protein [Populus trichocarpa]
Length = 460
Score = 118 bits (295), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 108/385 (28%), Positives = 166/385 (43%), Gaps = 60/385 (15%)
Query: 51 VFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMRHS 110
VF+L+ + KVGS+IG+ G +V+ +ET A I+I + +RIV+IS +E E S
Sbjct: 54 VFRLIVPVSKVGSIIGRKGELVKKMCDETRARIRILEGPLGITDRIVLISGKEEPEAPLS 113
Query: 111 PAQDAVMRVHSRIAEIGFEPGQA----------------VVARLLVHSQQIGCLLGRGGH 154
PA DAV+RV R++ G PG+ RLLV S Q L+G+ G
Sbjct: 114 PAMDAVLRVFKRVS--GLSPGEGDNTGSAAAAAAAGSAFCSIRLLVASSQAINLIGKQGS 171
Query: 155 IVSEMRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMK 214
I+ ++ TG +RV +D P + + IV++ G V AL + LR+ +
Sbjct: 172 IIKSIQENTGVVVRVMAEDDIPTYATSDERIVEIHGEAMKVFKALEAVIGHLRKFLVD-- 229
Query: 215 RPGPNNGHSYLPPFPEMPPPPFRPRHNPASPGSYPSPVGPFHSMDRGMGPSQPFDHQA-A 273
HS +P F + +Y + + D +QP H A A
Sbjct: 230 -------HSVIPIFEK----------------TYNATISLERPADACADNAQPSLHSAPA 266
Query: 274 FSHGMDPMVPPNSDRIPFPYGSERPGHGPTFDRPPSPRSWTPQGVGGGDPRGFDASSGFT 333
FS G+ + R P Y E H P + G+ G G ++
Sbjct: 267 FSSGIISDYSLSLKRDPSIY--EHETHFEHKISQPGFSLYGDPGLVGLRSTGLGRAT--- 321
Query: 334 PRNRPVESGNHAAILTSTTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGA 393
A I+T T + +P Y + G SN+++IR+ SGA + + + +
Sbjct: 322 -----------APIVTQVTQTMQVPLSYAEDIIGVAGSNIAYIRRTSGAILSIQESRGLP 370
Query: 394 TEGVVMVSGTSDQMRAAQSLIHAFI 418
E V + GTS Q++ AQ LI FI
Sbjct: 371 DEITVEIKGTSSQVQMAQQLIQEFI 395
>gi|356573119|ref|XP_003554712.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1-like
[Glycine max]
Length = 446
Score = 118 bits (295), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 113/388 (29%), Positives = 171/388 (44%), Gaps = 62/388 (15%)
Query: 49 EVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMR 108
E VF++L KVG +IG+ G ++ ET A +KI D P + +R V+ISA+E
Sbjct: 46 ESVFRMLVPAQKVGGIIGRKGEFIKKIVEETRARVKILDGPPGTVQRAVMISAKEEPGSS 105
Query: 109 HSPAQDAVMRVHSRIAEIGFEP---------GQAVVARLLVHSQQIGCLLGRGGHIVSEM 159
PA D ++RVH RI + G E V +LLV + Q G L+G+ G V +
Sbjct: 106 VPPAVDGLLRVHKRIID-GLESDFTHAPSGVAGKVSTKLLVPASQAGSLIGKQGGTVKSI 164
Query: 160 RRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRET--------IF 211
+ A+ +RV + P D +V+V+G+ V AL I S LR+ IF
Sbjct: 165 QEASNCIVRVLGAEDLPIFALQDDRVVEVVGDPTGVHKALELIASHLRKFLVDRGVIPIF 224
Query: 212 PMKRPGPNNGHS-YLPPFPEMPPPPFRPRHNPASPGSYPSPVGPFHSMDRGMGPSQPFDH 270
M N H+ ++PP PP +G+ P+
Sbjct: 225 EMNMQTANTHHAEHMPPHQSWGPP-------------------------QGLPPN--VGG 257
Query: 271 QAAFSHGMDPMVPPNSDRIPFPYGSERPGHGPTFDRPPSPRSWTPQGVGGGDPRGFDASS 330
+ F M PP +P +E P P DR P QG+ G DAS
Sbjct: 258 GSGFGPPSQYMPPPRQLDSYYP-PAEMP---PPVDRQPH------QGISA---YGRDASI 304
Query: 331 GFTPRNRPVESGNHAAILTSTTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPK 390
G + + + +I+T T ++ IP Y V G +++S+IR+ SGA V + + +
Sbjct: 305 GVHASSN---TQSAPSIVTQITQQMQIPLSYADAVIGTAGASISYIRRASGATVTIQEAR 361
Query: 391 PGATEGVVMVSGTSDQMRAAQSLIHAFI 418
E V +SGT+ Q++ AQ LI F+
Sbjct: 362 GVPGEMTVEISGTASQVQTAQQLIQNFM 389
>gi|297849822|ref|XP_002892792.1| hypothetical protein ARALYDRAFT_471578 [Arabidopsis lyrata subsp.
lyrata]
gi|297338634|gb|EFH69051.1| hypothetical protein ARALYDRAFT_471578 [Arabidopsis lyrata subsp.
lyrata]
Length = 477
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 67/179 (37%), Positives = 100/179 (55%), Gaps = 22/179 (12%)
Query: 48 EEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEM 107
EE V++ LC + K GS+IGKGG I + ++ET ++++I + LP EER+V I + N E+
Sbjct: 42 EETVYRYLCPVKKTGSIIGKGGDIAKQIRSETKSNMRINEALPGCEERVVTIYS-TNEEL 100
Query: 108 RH--------SPAQDAVMRVHSRIA----------EIGFEPGQAVVARLLVHSQQIGCLL 149
H PA DA+ +VH + + Q V R+LV S QIGC++
Sbjct: 101 NHFGDDGELVCPALDALFKVHDMVVADIDHDDGNDDDDLGEKQTVTVRMLVPSDQIGCVI 160
Query: 150 GRGGHIVSEMRRATGASIRVFPKDQAPRCGSP--HDEIVQVIGNYHSVQDALFHITSRL 206
G+GG ++ +R T A IRV KD P C HDE++Q+IG V++AL+ + S L
Sbjct: 161 GKGGQVIQNLRNDTNAQIRVI-KDHLPSCALTLSHDELLQIIGEPLVVREALYQVASLL 218
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 62/164 (37%), Positives = 95/164 (57%), Gaps = 9/164 (5%)
Query: 72 VRTFQNETGASIKIADILPDSEERIVVISARENSEMRHSPAQDAVMRVHSRIAE-IGFEP 130
+ + ETGA+I++ D ++ I+VIS++E E SPA +A +R+ R +E +G +
Sbjct: 289 INQIRQETGATIRVNTSETDEDDCIIVISSKEFYE-DQSPAVNAAIRLQQRCSEKVGKDA 347
Query: 131 GQ-AVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAPRCGSPHDEIVQVI 189
A+ RLLV S QIGCL+G+GG ++SEMR T A+IR+ K+ P+ +E+VQ+
Sbjct: 348 NDLAISTRLLVSSSQIGCLIGKGGAVISEMRSVTRANIRILQKEDVPKIAREDEEMVQIT 407
Query: 190 GNYHSVQDALFHITSRLRETIFPMKRPGPNNGHSYLPP-FPEMP 232
GN + AL + RLR F M ++G LP FP +P
Sbjct: 408 GNPDAAMKALTQVILRLRANSFDM-----DHGLVLLPTSFPYIP 446
>gi|257831439|gb|ACV71020.1| UPA21 [Capsicum annuum]
Length = 433
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 108/379 (28%), Positives = 172/379 (45%), Gaps = 65/379 (17%)
Query: 51 VFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMRHS 110
V++L+ L KVGS+IG+ G +V+ +TGA I++ + + +RIV+IS RE+ + + S
Sbjct: 55 VYRLVVPLVKVGSIIGRKGELVKKMCEQTGARIRVLEGPLGNADRIVLISGREDPDAQVS 114
Query: 111 PAQDAVMRVHSRIAEIGFEPGQ---------AVVARLLVHSQQIGCLLGRGGHIVSEMRR 161
PA DAV RV R+A G E G +LL+ S Q L+GR G + E++
Sbjct: 115 PAMDAVFRVFKRVA--GLEGGDPGAAAAGFAFCSFKLLMASSQAVHLIGRHGSTIKEIQE 172
Query: 162 ATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKRPGPNNG 221
+GAS+RV +D + + IV++ G V DA + +LR+ +
Sbjct: 173 RSGASLRVLSEDDVVPYATADERIVEIRGEGLKVLDAFEAVVRQLRKFLVD--------- 223
Query: 222 HSYLPPFPEMPPPPFRPRHNPASPG-SYPSPVGPFHSMDRGMG-PSQPFDHQAAFSHGMD 279
HS +P F E RP + A S S G M + D +AA MD
Sbjct: 224 HSMIPIF-EKTCSQDRPLESWAEKSQSLNSEAGAVSDYSFSMNRDTYLLDCEAA----MD 278
Query: 280 PMVPPNSDRIPFPYGSERPGHGPTFDRPPSPRSWTPQGVGGGDPRGFDASSGFTPRNRPV 339
+P ++ + YG + PGHG G S+G R PV
Sbjct: 279 SKLPRSTLSL---YGQD-PGHG-----------------------GIRTSAG---RIGPV 308
Query: 340 ESGNHAAILTSTTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATEGVVM 399
+T T + +P LY + G +N+++IR+ S A + V + + E +
Sbjct: 309 --------VTQMTKVMQVPLLYAEDIIGIGGTNIAYIRRTSKAVLTVQESRGLPEEITIE 360
Query: 400 VSGTSDQMRAAQSLIHAFI 418
+ G+S +++ A+ LI FI
Sbjct: 361 IKGSSSEVQTAEQLIQEFI 379
>gi|388500506|gb|AFK38319.1| unknown [Lotus japonicus]
Length = 437
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 58/172 (33%), Positives = 105/172 (61%), Gaps = 4/172 (2%)
Query: 48 EEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEM 107
EE++ ++LC +K+G +IG+GGS +++ + +G I++ D + +E +++I+ E+
Sbjct: 118 EELIIRMLCPSNKIGRVIGRGGSTIKSMRQASGTRIEVDDSKANHDECLIIITTTESPSD 177
Query: 108 RHSPAQDAVMRVHSRIAEIGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASI 167
S A +AV+ + +I++ E V +LLV S+ IGC++G+ G I++E+R+ T A I
Sbjct: 178 LKSMAVEAVLLIQGKISD---EDDTEVSIQLLVPSKVIGCIIGKSGSIINEIRKRTRADI 234
Query: 168 RVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKRPGPN 219
R+ D+ P+C +DE+V+V G V+DAL I RLR+ + + G N
Sbjct: 235 RISKGDK-PKCADVNDELVEVGGAIDCVRDALIQIILRLRDDVLRERDTGHN 285
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 49/69 (71%), Gaps = 1/69 (1%)
Query: 351 TTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATEGVVMVSGTSDQMRAA 410
+T++++IP + V G+ +N+++IR+ISGA + ++D + + + ++SGT ++ RAA
Sbjct: 368 STLDILIPANAVGKVLGKGGANIANIRKISGATIEISDARARG-DRIALISGTPEEKRAA 426
Query: 411 QSLIHAFIL 419
++LI AFI+
Sbjct: 427 ENLIQAFIM 435
>gi|356505941|ref|XP_003521747.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine
max]
Length = 443
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 117/383 (30%), Positives = 171/383 (44%), Gaps = 52/383 (13%)
Query: 49 EVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMR 108
E VF++L KVG +IG+ G ++ ET A +KI D P + +R V+ISA+E
Sbjct: 43 ESVFRMLVPAQKVGGIIGRKGEFIKKIVEETRARVKILDGPPGTVQRAVMISAKEEPGSS 102
Query: 109 HSPAQDAVMRVHSRIAEIGFEP---------GQAVVARLLVHSQQIGCLLGRGGHIVSEM 159
PA D ++R+H RI + G E V +LLV + Q G L+G+ G V +
Sbjct: 103 VPPAVDGLLRIHKRIID-GLESDFTHAPSGVAGKVSTKLLVPASQAGSLIGKQGGTVKSI 161
Query: 160 RRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKRPGPN 219
+ A+ +RV + P D +V+V+G+ V AL I S LR+ F + R
Sbjct: 162 QEASNCIVRVLGAEDLPIFALQDDRVVEVVGDPAGVHKALELIASHLRK--FLVDR---- 215
Query: 220 NGHSYLPPFPEMPPPPFRPRHNPASPGSYPSPVGPFHSMDRGMGPSQPFDHQAAFSHGMD 279
+P F EM P H P P S GPSQ G
Sbjct: 216 ---GVIPIF-EMNMQTANPHHAEHMP--------PHQS----WGPSQGLPPNVGGGPGFG 259
Query: 280 P----MVPPNSDRIPFPYGSERPGHGPTFDRPPSPRSWTPQGVGGGDPRGFDASSGFTPR 335
P M PP +P +E P P DR P QG+ G DAS G
Sbjct: 260 PPSQYMPPPRQLDSYYP-SAEMP---PPVDRQPH------QGISA---YGRDASIGVHAS 306
Query: 336 NRPVESGNHAAILTSTTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATE 395
+ + + +I+T T ++ IP Y V G +++S+IR+ SGA V + + + E
Sbjct: 307 SN---TQSAPSIVTQITQQMQIPLSYADAVIGTAGASISYIRRASGATVTIQEARGVPGE 363
Query: 396 GVVMVSGTSDQMRAAQSLIHAFI 418
V +SGT+ Q++ AQ LI F+
Sbjct: 364 MTVEISGTASQVQTAQQLIQNFM 386
>gi|212723602|ref|NP_001132277.1| uncharacterized protein LOC100193713 [Zea mays]
gi|194693942|gb|ACF81055.1| unknown [Zea mays]
Length = 510
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 64/161 (39%), Positives = 100/161 (62%), Gaps = 3/161 (1%)
Query: 48 EEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPD-SEERIVVISARENSE 106
EE ++LC + +GS+IGK G+ VR + +TGA IK+ +I D S ER+++IS+ E
Sbjct: 31 EEFSIRILCASELIGSVIGKSGANVRRVEQQTGARIKVQEIDKDASGERLIIISSNEIPA 90
Query: 107 MRHSPAQDAVMRVHSRIAEIGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGAS 166
SPA +A++ +H +++ + + RL+V S ++GC++G GG ++++MRR TGA
Sbjct: 91 EPISPAIEALILLHDKVSAPSEKHHSST--RLVVPSSKVGCIIGEGGKVITDMRRRTGAE 148
Query: 167 IRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLR 207
IRV+ K P+ S DE+VQV G + AL I SRLR
Sbjct: 149 IRVYSKADKPKYLSFDDELVQVAGPPTIARGALTEIASRLR 189
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 44/68 (64%)
Query: 351 TTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATEGVVMVSGTSDQMRAA 410
+TIE+ IP + + G NL+ IRQ+SGA + +++ G++E VV + GT DQ +AA
Sbjct: 421 STIELRIPNSSLGSIVGAGGVNLAEIRQVSGARLRLHEAHAGSSESVVEIQGTLDQAKAA 480
Query: 411 QSLIHAFI 418
QSL+ FI
Sbjct: 481 QSLLQGFI 488
>gi|297821485|ref|XP_002878625.1| KH domain-containing protein [Arabidopsis lyrata subsp. lyrata]
gi|297324464|gb|EFH54884.1| KH domain-containing protein [Arabidopsis lyrata subsp. lyrata]
Length = 633
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 74/179 (41%), Positives = 100/179 (55%), Gaps = 11/179 (6%)
Query: 47 EEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSE 106
E +VVFK++ G +IGK G+I+R QNETGASI I L S ER+V ISAREN E
Sbjct: 274 ERKVVFKIIFTSVVAGGIIGKQGTIIRALQNETGASISIGAPLKVSGERVVTISARENLE 333
Query: 107 MRHSPAQDAVMRVHSRIAEI--------GFEPGQAVVARLLVHSQQIGCLLGRGGHIVSE 158
R+S AQ+A+ V +R EI G G V +LLV SQ L+G G E
Sbjct: 334 SRYSHAQNALALVFARSVEIDVEKGLRPGLHNGAVVKTKLLVPSQFANSLVGNGNR---E 390
Query: 159 MRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKRPG 217
ATGA + + +Q S ++ ++++ G Y VQ AL H++S+LRE + P K G
Sbjct: 391 AIIATGADVHIPVDNQILEWISENEVVIEIKGEYGHVQKALTHVSSKLRENLLPKKVLG 449
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 100/239 (41%), Gaps = 50/239 (20%)
Query: 48 EEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVI---SAREN 104
+E +++CH +G +IG G +V + ETG I + S+ +V I +A
Sbjct: 23 DETAIRVVCHASVIGGIIGSNGYVVSKLRRETGTKIHCESPVNGSDHWVVFIVGSTAVNK 82
Query: 105 SEMRH-------------------SPAQDAVMRVHSR-IAEIGFEPGQAVV--------A 136
S + S AQ A++RV R + + G VV
Sbjct: 83 SVLLTDRVGDFSGGEHEDWVTCDVSAAQTALIRVLERSWVVLAAKDGGGVVDGEDEEAYC 142
Query: 137 RLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQ 196
+L QIG +LG GG V MRR++GA IRV P P CG+ DE++Q+ G+ +V+
Sbjct: 143 GILADRNQIGAVLGLGGKNVEWMRRSSGAMIRVLP---PPICGTNTDELIQITGDVLAVK 199
Query: 197 DALFHITSRLRETIFPMKRPGPNNGHSYLPPFPEMPPPPFRPRHNPASPGSYPSPVGPF 255
AL +++ +++ PP P P + ++ G+ P F
Sbjct: 200 KALVMVSTCIQDN----------------PPVNGYPQPLCIKAYESSTDGNSEDPHSEF 242
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 41/67 (61%), Gaps = 1/67 (1%)
Query: 352 TIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATEGVVMVSGTSDQMRAAQ 411
T+E+ + + + +YG + + + ++RQISGA V V DP G V+++SG +Q R A
Sbjct: 565 TLELTVEKDALGSLYGRDGTGVDNLRQISGAGVDVKDP-TGIEATVLIISGNPEQTRTAM 623
Query: 412 SLIHAFI 418
SLI + +
Sbjct: 624 SLIESIL 630
>gi|168039902|ref|XP_001772435.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162676232|gb|EDQ62717.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 375
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 71/188 (37%), Positives = 107/188 (56%), Gaps = 20/188 (10%)
Query: 51 VFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMRHS 110
VF+L+ + KVG +IG+ G V+ ET + IKI + +P + ERIV++SARE+ E S
Sbjct: 14 VFRLVVPVQKVGGIIGRKGEFVKRMCEETRSRIKILEGVPGTAERIVMVSAREDPEAAIS 73
Query: 111 PAQDAVMRVHSRIAEIGFEP----------GQAVVARLLVHSQQIGCLLGRGGHIVSEMR 160
PA + ++RVH R+ E G EP G V +RLLV + Q G L+GR G + ++
Sbjct: 74 PAMEGLLRVHRRVIE-GAEPESVDAEIAPGGAPVSSRLLVAATQAGSLIGRQGATIKSIQ 132
Query: 161 RATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKRPGPNN 220
+GA++RV P ++ P C D +V+V G+ +VQ A+ + S LR+ F + R
Sbjct: 133 DTSGANVRVLPAEELPLCALADDRVVEVQGDPRNVQRAMELVVSHLRK--FLVDR----- 185
Query: 221 GHSYLPPF 228
S LP F
Sbjct: 186 --SVLPLF 191
Score = 43.9 bits (102), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 40/72 (55%)
Query: 347 ILTSTTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATEGVVMVSGTSDQ 406
++T T + IP Y + G +N+S++R+ SGA + + + + E V + G++ Q
Sbjct: 278 VITQVTQHMQIPLSYADAIIGSAGANISYMRRTSGATITIQETRSVPGEMTVEIHGSASQ 337
Query: 407 MRAAQSLIHAFI 418
++ AQ LI F+
Sbjct: 338 VQTAQQLIQNFM 349
>gi|242078463|ref|XP_002444000.1| hypothetical protein SORBIDRAFT_07g005630 [Sorghum bicolor]
gi|241940350|gb|EES13495.1| hypothetical protein SORBIDRAFT_07g005630 [Sorghum bicolor]
Length = 629
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 63/163 (38%), Positives = 102/163 (62%), Gaps = 4/163 (2%)
Query: 49 EVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMR 108
E+ F++LC K+G +IG+GG+ ++ + E+GA I + D D EE I+ I++ E +
Sbjct: 309 ELEFRVLCPSGKIGLVIGRGGATIKNIRQESGARIDVDDAKNDREESIITITSTEAIDDV 368
Query: 109 HSPAQDAVMRVHSRIAEIGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIR 168
S A +AV+ + ++I + +E + + RLLV ++ IGCL+GRGG IV++MR+ T A+I
Sbjct: 369 KSAAVEAVLLLQAKIND--YEDDRMNL-RLLVPNKVIGCLIGRGGSIVNDMRKKTKANIL 425
Query: 169 VFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIF 211
+ D+ PR S DE+V+V G ++DAL I RLRE +
Sbjct: 426 ISKGDK-PRRASSSDELVEVSGEADKLRDALVQIILRLREDVL 467
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 96/423 (22%), Positives = 178/423 (42%), Gaps = 71/423 (16%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVI---------S 100
V++++LC +GS+IGK G+++ + +T A +K+ D P +++R++++
Sbjct: 41 VLYRILCPDSLIGSVIGKNGNVINAIRQQTSAKVKVVDPYPGADKRVILVYCYVKHRDLD 100
Query: 101 ARENSEMRHSPAQDAVMRVHSRIAEI------GFEPGQAVVARLLVHSQQIGCLLGRGGH 154
A + AQDA++RVH+ I + + A +LV + Q ++G+ G
Sbjct: 101 AEVDDNEPVCAAQDALLRVHNAIVDTLHRNRRDSDKKNTEEANILVPASQASNVIGKSGA 160
Query: 155 IVSEMRRATGASIRVFPKDQAP---RCGSPHDEIVQVIGNYHSVQDALFHITSRL----- 206
++ +R + A I+V PKD + C D VQ+ G +V+ ALF +++ +
Sbjct: 161 VIKHLRSTSRAFIKVSPKDPSDATHSCAMSFDNFVQITGGAEAVKKALFGVSTIIYKHPS 220
Query: 207 RETIFPMKRPGPNNGHSYLPP--FPEMPPPPFRPRHNPASPGSYPSP--VGPFHSMDRGM 262
+E I P++ P S + P P P F + A P +PS +G H +
Sbjct: 221 KENI-PLETSIPEPTPSIIIPSELPVYPASNFYSAPDAAIPSVHPSLSILGSTHHVPELA 279
Query: 263 GPSQPFDHQAAFSHGMDPMVPPNSDRIPFPYGSERPGHGPTFDRPPSPRSWTPQGVGGGD 322
P A HG P+ P IP + G PS + G GG
Sbjct: 280 LP--------ADDHGRLPIYPSILPVIPTYSAPKCSGELEFRVLCPSGKIGLVIGRGGAT 331
Query: 323 PRGFDASSGFTPRNRPVESGNHAAILTSTTIE---------------------------- 354
+ SG ++ +I+T T+ E
Sbjct: 332 IKNIRQESGARIDVDDAKNDREESIITITSTEAIDDVKSAAVEAVLLLQAKINDYEDDRM 391
Query: 355 ---VVIPQLYMAHVYGENNSNLSHIRQISGANVVVND-PKP---GATEGVVMVSGTSDQM 407
+++P + + G S ++ +R+ + AN++++ KP +++ +V VSG +D++
Sbjct: 392 NLRLLVPNKVIGCLIGRGGSIVNDMRKKTKANILISKGDKPRRASSSDELVEVSGEADKL 451
Query: 408 RAA 410
R A
Sbjct: 452 RDA 454
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 45/66 (68%)
Query: 354 EVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATEGVVMVSGTSDQMRAAQSL 413
E+ IP ++ V G+ +NL +IR+ISGA++ + + K + + +SGTS+Q ++A++L
Sbjct: 562 EMTIPASGLSKVMGKRGTNLDNIRKISGAHIEIIESKSSRHDHIAYISGTSEQRQSAENL 621
Query: 414 IHAFIL 419
I AFI+
Sbjct: 622 IKAFIM 627
>gi|413917022|gb|AFW56954.1| hypothetical protein ZEAMMB73_179405 [Zea mays]
Length = 632
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 62/163 (38%), Positives = 100/163 (61%), Gaps = 4/163 (2%)
Query: 49 EVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMR 108
E+ F++LC K+G +IG+GG+ ++ + E+GA I + D D EE I+ I + E+++
Sbjct: 312 ELEFRVLCPGGKIGLVIGRGGATIKNIRQESGARIDVDDAKNDKEESIITIISTESTDDV 371
Query: 109 HSPAQDAVMRVHSRIAEIGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIR 168
S A +AV+ + ++I + + RLLV ++ IGCL+GRGG IV++MR+ T A+I
Sbjct: 372 KSAAVEAVLLLQAKIND---SEDDRMNLRLLVPNKVIGCLIGRGGSIVNDMRKKTKANIL 428
Query: 169 VFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIF 211
+ D+ PR S DE+V+V G ++DAL I RLRE +
Sbjct: 429 ISKGDK-PRRASSSDELVEVSGEADKLRDALVQIILRLREAVL 470
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 111/229 (48%), Gaps = 29/229 (12%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVI---------S 100
V++++LC +GS+IGK G+++ +++T A +K+ D P +++R++++
Sbjct: 41 VLYRILCPDSLIGSVIGKHGNVINAIRHQTSAKVKVVDPYPGADKRVILVYCYVKHRDLD 100
Query: 101 ARENSEMRHSPAQDAVMRVHSRIAEI---------GFEPGQAVVARLLVHSQQIGCLLGR 151
A + AQDA++RVH+ I + + A +LV + Q ++G+
Sbjct: 101 AEGDDNEPVCAAQDALLRVHNAIVDALQTLHKNHKDSDKKSTEEANILVPASQASNVIGK 160
Query: 152 GGHIVSEMRRATGASIRVFPKDQAP---RCGSPHDEIVQVIGNYHSVQDALFHITSRL-- 206
G ++ +R + A I+V PKD + C D VQ+ G +V+ ALF +++ +
Sbjct: 161 SGAVIKHLRSTSRAFIKVSPKDPSDPTHSCAMSFDNFVQITGGAEAVKKALFGVSTIIYK 220
Query: 207 ---RETIFPMKRPGPNNGHSYLPP--FPEMPPPPFRPRHNPASPGSYPS 250
+E I P++ P+ S + P P P F + A P +PS
Sbjct: 221 HPSKENI-PLETSIPDPTPSIIIPSELPVYPASNFYSAPDAAIPSVHPS 268
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 47/67 (70%)
Query: 353 IEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATEGVVMVSGTSDQMRAAQS 412
+E+ +P ++ V G++ +NL +IR+ISGA++ + +PK E + +SGTS+Q +A++
Sbjct: 564 LEMTVPASGISKVMGKHGTNLDNIRKISGAHIEIIEPKSSRHEHIAYISGTSEQRHSAEN 623
Query: 413 LIHAFIL 419
LI AFI+
Sbjct: 624 LIKAFIM 630
>gi|145347410|ref|XP_001418160.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144578389|gb|ABO96453.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 651
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 101/383 (26%), Positives = 169/383 (44%), Gaps = 86/383 (22%)
Query: 49 EVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMR 108
E+ F+LLC + K GS+IG+ G +++ +++TGA +K+ + + +EERI+ +S+ ++
Sbjct: 312 EITFRLLCPVSKTGSVIGRNGEVIQQIRSQTGAKVKVCEQVNGAEERIICVSSSDDGLAP 371
Query: 109 HSPAQDAVMRVHSRIAEIGFEPGQAVVA--RLLVHSQQIGCLLGRGGHIVSEMRRATGAS 166
AQ A+ RV+ I E G + RLLV + QIGCL+G+GG I+ ++R TGA+
Sbjct: 372 MLAAQVALFRVYRCIVE---SAGNEIPLPFRLLVQTSQIGCLIGKGGSIIKQIRNETGAT 428
Query: 167 IRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDAL-FHITS-RLRETIFPMKRPGPNNGHSY 224
+RV P + P C + DE+++ IG + + AL I S RLR I
Sbjct: 429 VRVLPSEALPSCAN-DDELLE-IGQWPADACALGIRIVSGRLRGNI-------------- 472
Query: 225 LPPFPEMPPPPFRPRHNPASPGSYPSPVGPFHSMDRGMGPSQPFDHQAAFSHGMDPMVPP 284
RH A + D Q + G D
Sbjct: 473 --------------RHKAAER------------------LTSTADAQNTQTMGFDATWQQ 500
Query: 285 NSDRIPFPYGSERPGHGPTFDRPPSPRSWTPQGVGGGDPRGFDASSGFTPRNRPVESGNH 344
PYG + +G P + + GG R PVE
Sbjct: 501 AE---LIPYGMTQTAYGS----PETVMMSKTKSTGG-------------ARAPPVEIAPG 540
Query: 345 AAILTSTTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGA---------TE 395
+++ S +++ I ++ V G N+S RQ+SGA + + G+ ++
Sbjct: 541 VSVVNS--VQMAISSQHIGSVLGRGGCNISLARQVSGARIKLYPGAAGSRRTADRSVDSD 598
Query: 396 GVVMVSGTSDQMRAAQSLIHAFI 418
++ +SG+S+Q+ +AQ +I FI
Sbjct: 599 RLLEISGSSEQVASAQDIIQRFI 621
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 66/247 (26%), Positives = 115/247 (46%), Gaps = 43/247 (17%)
Query: 40 GRNRMFYEEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVI 99
G N F + V ++LLC ++G +IGK G +++ + ETGA +K+A ++ER++++
Sbjct: 48 GSNGEFRDASVRYRLLCPTTRIGRVIGKEGRVIKATRAETGARVKVAPTTRGADERVILV 107
Query: 100 SARENSEMRH-----SPAQDAVMRVHSRIA-EIGFEPGQAV------------------- 134
++ ++ + + A+ A+ R+ I E G +
Sbjct: 108 ASGDDLTVGEDGEGMTTAEVALFRIFDTITGEEGVTAARGGEGEGEGEASGGSTRGASTP 167
Query: 135 VARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAPRCGSPHDEIVQVIG---- 190
+ RLLV Q+G L+G+GG ++S +R ++GA++RV P + P C S DE++Q+
Sbjct: 168 ICRLLVPRVQVGSLIGKGGTVISAIRASSGATVRVMPANMLPACASQGDELLQITAPSRD 227
Query: 191 ----------NYHSVQDALFHITSRLRETIFPMKRPGPNNGHSYLPPFPEMPPPPFRPRH 240
+ SV++AL I LRE +P K + S F M P
Sbjct: 228 ADGAERDQKLSMASVKNALRMIAKHLRE--YPSKNAATESNRSPFEAF--MIGNKTAPHA 283
Query: 241 NPASPGS 247
SPG+
Sbjct: 284 GVESPGA 290
>gi|297814608|ref|XP_002875187.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297321025|gb|EFH51446.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 469
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 69/196 (35%), Positives = 110/196 (56%), Gaps = 17/196 (8%)
Query: 54 LLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEER---IVVISARENSEMRHS 110
+C + VG +IGKGG + + E+GA+IK+ P+++E I+ ISA+E E S
Sbjct: 248 FICPAENVGGVIGKGGCFINQTRQESGATIKVH--TPETDEDDDCIIFISAKEFFE-DQS 304
Query: 111 PAQDAVMRVHSRIAE-IGFEPGQ-AVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIR 168
P +A +R+ +R +E +G + A+ R+L+ S Q+GCL+G+GG ++SEMR T A+IR
Sbjct: 305 PTVNAALRLQTRCSEKVGKDSSDSAISTRVLIPSSQVGCLIGKGGALISEMRSVTKANIR 364
Query: 169 VFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKRPGPNNGHSYLPPF 228
+F + PR ++E+VQ+ G+ + AL + RLR +F M R G LP F
Sbjct: 365 IFQGEDVPRIARENEEMVQITGSLDAAIKALTQVMLRLRANVFDMDR-----GLVLLPTF 419
Query: 229 ----PEMPPPPFRPRH 240
+ +PRH
Sbjct: 420 FPYISQTIETSSKPRH 435
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 65/180 (36%), Positives = 101/180 (56%), Gaps = 22/180 (12%)
Query: 48 EEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISAR----- 102
E+ V++ LC + K GS+IG+GG I + ++ET A+++I + LP +ER+V I +
Sbjct: 16 EDTVYRYLCPVRKAGSIIGRGGEIAKQIRSETKANMRINEALPGCDERVVTIYSNSEETN 75
Query: 103 --ENSEMRHSPAQDAVMRVHSRIAEIGFEPG------------QAVVARLLVHSQQIGCL 148
E+ E PA DA+ +VH I F+ Q V R+LV S QIGCL
Sbjct: 76 RIEDDEDFVCPAFDALFKVHDMIVAEEFDNDGDYDNGDEYSERQTVTVRMLVPSDQIGCL 135
Query: 149 LGRGGHIVSEMRRATGASIRVFPKDQAPRCGSP--HDEIVQVIGNYHSVQDALFHITSRL 206
+G+GG ++ ++R T A IRV D P C HDE++Q+IG+ +V++AL+ + L
Sbjct: 136 IGKGGQVIQKLRNDTNAQIRVI-NDNLPICALALSHDELLQIIGDPSAVREALYQVAFLL 194
>gi|308804768|ref|XP_003079696.1| putative KH domain containing protein (ISS) [Ostreococcus tauri]
gi|116058152|emb|CAL53341.1| putative KH domain containing protein (ISS), partial [Ostreococcus
tauri]
Length = 709
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 63/163 (38%), Positives = 102/163 (62%), Gaps = 8/163 (4%)
Query: 49 EVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMR 108
E++F+LLC + K GS+IG+ G +++ ++ETGA +K+ + + ++EERI+ +S+ ++
Sbjct: 342 EIMFRLLCPVSKTGSVIGRNGEVIQQIRSETGAKVKVCEQINNAEERIICVSSNDDGLAP 401
Query: 109 HSPAQDAVMRVHSRIAEIGFEPGQAVVA--RLLVHSQQIGCLLGRGGHIVSEMRRATGAS 166
AQ A+ RV+ I + G V RLLV + QIGCL+G+GG I+ ++R TGA+
Sbjct: 402 MLAAQVALFRVYRCIVD---SSGSDVPLPFRLLVQTSQIGCLIGKGGSIIRQIRNETGAT 458
Query: 167 IRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDAL-FHITS-RLR 207
+RV P D P C + DE+++ IG + + AL I S RLR
Sbjct: 459 VRVLPSDALPACANADDELLE-IGQWPADACALGIRIVSGRLR 500
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 75/264 (28%), Positives = 120/264 (45%), Gaps = 60/264 (22%)
Query: 19 GYAPGYHSRG---YSSGPGHETVGGRNRMFYEEEVVFKLLCHLDKVGSLIGKGGSIVRTF 75
G+A RG S+ G T GGR V F+LLC + ++G +IGK G +++
Sbjct: 40 GFAFARDGRGGVDRSAVAGWATEGGR----VNASVQFRLLCPVARIGRVIGKEGRVIKAL 95
Query: 76 QNETGASIKIADILPDSEERIVVISARENSEMRH--------SPAQDAVMRVHSRIA--- 124
+ ETGA +K+A ++ER+V++++ E M + A+ A+ R+ +A
Sbjct: 96 RAETGARVKVAPTTRGADERVVLVASGEELMMDDGDGSDVPVTTAERALFRIFDTVASES 155
Query: 125 ---------------------------EIGFEPGQAV-VARLLVHSQQIGCLLGRGGHIV 156
E G+AV + RLLV Q+G L+G+GG ++
Sbjct: 156 GGALDGTRDGTSSESGSGVPESSSTGGERSMNGGRAVPICRLLVPRAQVGSLIGKGGAVI 215
Query: 157 SEMRRATGASIRVFPKDQAPRCGSPHDEIVQVI-------GN-----YHSVQDALFHITS 204
S +R ++GA++R+ P P C S DE++Q+ GN SV+ AL +
Sbjct: 216 SAIRASSGATVRLMPATMLPTCASRGDELLQITAPVRDTDGNDVDLALASVKSALRMVAK 275
Query: 205 RLRETIFPMKRPGPNNGHSYLPPF 228
LRE +P K + S L F
Sbjct: 276 NLRE--YPTKMATSESFRSPLEAF 297
Score = 40.8 bits (94), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 44/83 (53%), Gaps = 14/83 (16%)
Query: 347 ILTSTTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGA-----------TE 395
+ T ++ + I ++ V G N+S RQ+SGA + + PGA +E
Sbjct: 571 VTTVNSVHMTISSQHIGSVLGRGGCNISIARQVSGARIKL---YPGASGRNGARRAQDSE 627
Query: 396 GVVMVSGTSDQMRAAQSLIHAFI 418
++ +SGTS+Q+ +AQ++I FI
Sbjct: 628 RLLEISGTSEQVSSAQTIIERFI 650
>gi|356562072|ref|XP_003549298.1| PREDICTED: poly(rC)-binding protein 3-like [Glycine max]
Length = 436
Score = 114 bits (285), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 106/385 (27%), Positives = 166/385 (43%), Gaps = 69/385 (17%)
Query: 51 VFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMRHS 110
VF+L+ + KVGS+IG+ G +++ ET A I++ D + +RIV+IS +E E S
Sbjct: 47 VFRLIVPVLKVGSIIGRKGELIKKTCEETKARIRVLDGAVGTSDRIVLISGKEEPEAPLS 106
Query: 111 PAQDAVMRVHSRI---AEIGFEPGQAVVA----RLLVHSQQIGCLLGRGGHIVSEMRRAT 163
PA +AV+RV R+ +EI E + VA RLLV S Q L+G+ G ++ ++ T
Sbjct: 107 PAMNAVIRVFKRVSGFSEIDAENKASAVAFCSVRLLVASTQAINLIGKQGSLIKSIQENT 166
Query: 164 GASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKRPGPNNGHS 223
GAS+RV D+ P + + IV++ G V AL + LR+ + +S
Sbjct: 167 GASVRVLSGDEVPFYAAADERIVELQGEAMKVLKALEAVVGHLRKFLV---------DNS 217
Query: 224 YLPPFPEMPPPPFRPRHNPASPG-SYPSPVGPFHSMDR-GMGPSQPFDHQ-----AAFSH 276
LP F + H + PS HS + + P + A
Sbjct: 218 VLPLFEKTYNATISQEHQADTTWVDKPS----LHSASQPSIVTDLPLSTKRDSLFADRES 273
Query: 277 GMDPMVPPNSDRIPFPYGSERPGHG---PTFDRPPSPRSWTPQGVGGGDPRGFDASSGFT 333
+D ++PP++ I YG + G RP +P
Sbjct: 274 QLDSLLPPSTMSI---YGQDSSLSGLRSSALSRPSAP----------------------- 307
Query: 334 PRNRPVESGNHAAILTSTTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGA 393
I+T+ + IP Y + G +N+ +IR SGA + V + P
Sbjct: 308 ------------PIVTTVIQTMQIPLSYAEDIIGIQGTNIEYIRCTSGAILTVQE-SPVP 354
Query: 394 TEGVVMVSGTSDQMRAAQSLIHAFI 418
E +V + GTS Q++ AQ LI I
Sbjct: 355 DEIIVEIKGTSSQVQTAQQLIQEVI 379
>gi|148909250|gb|ABR17725.1| unknown [Picea sitchensis]
Length = 435
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 73/231 (31%), Positives = 125/231 (54%), Gaps = 34/231 (14%)
Query: 48 EEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEM 107
+ V+++LC + +GS+IGKGG ++++ + ET + I++AD +P +ER++VI + S+
Sbjct: 40 DSTVYRILCPSNVIGSVIGKGGKVIKSMRQETRSKIRVADAVPGVDERVIVIFSSPLSKD 99
Query: 108 RH-------------SPAQDAVMRVHSRIAEIG------FEPGQAVVARLLVHSQQIGCL 148
+ PAQD ++RVHS I + + + ARLLV + QIG L
Sbjct: 100 KEKDDDDDDNENEPVCPAQDGLLRVHSVIVQESSGKDNDADKKRPQDARLLVANSQIGSL 159
Query: 149 LGRGGHIVSEMRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRL-- 206
+G+GG+ + ++R +GA I++ KD+ P C DE+V + G+ +V+ AL+ +++ L
Sbjct: 160 IGKGGNNIQKLRSESGAQIQIPRKDELPGCAFSFDELVVISGDAAAVKKALYAVSAFLFK 219
Query: 207 ---RETIFPMKRPGPNNGHSYLPP--FPEMPPPPFRPR-------HNPASP 245
+E I P P S LPP P PP + P+ HN ++P
Sbjct: 220 HPPKEQI-PWSVILPETNQSSLPPSGVPTFPPANYLPQGDSLFGHHNLSAP 269
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 72/141 (51%), Gaps = 27/141 (19%)
Query: 33 PGHETVGGRNRMFYEEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDS 92
P G EE ++LC DK+G +IGKGG+ +++ +N+TGASI++ D
Sbjct: 299 PSFSKFGNSTTKKTSEEFSIRVLCPNDKIGGVIGKGGNTIKSMRNDTGASIRVED----- 353
Query: 93 EERIVVISARENSEM-------------RHSPAQDAVMRVHSRIAEIGFEPGQAVVARLL 139
A+ S+ R SP +AV+ + + + + G A+ R L
Sbjct: 354 --------AQTESDERVIVVSATELADDRVSPTIEAVLLLQGKTSGTTDKDG-AISTRFL 404
Query: 140 VHSQQIGCLLGRGGHIVSEMR 160
V S+ IGCLLG+GG+I+SEMR
Sbjct: 405 VPSKHIGCLLGKGGNIISEMR 425
>gi|356549146|ref|XP_003542958.1| PREDICTED: poly(rC)-binding protein 3-like [Glycine max]
Length = 436
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 104/385 (27%), Positives = 169/385 (43%), Gaps = 69/385 (17%)
Query: 51 VFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMRHS 110
VF+L+ + KVGS+IG+ G +++ ET A I++ D + +RIV+IS +E+ E S
Sbjct: 47 VFRLIVPVLKVGSIIGRKGELIKKTCEETKARIRVLDGAVGTSDRIVLISGKEDLEAPLS 106
Query: 111 PAQDAVMRVHSRI---AEIGFEPGQAVVA----RLLVHSQQIGCLLGRGGHIVSEMRRAT 163
PA DAV+RV R+ +EI + + VA RLLV S Q L+G+ G ++ ++ T
Sbjct: 107 PAMDAVIRVFKRVSGFSEIDAKNKASAVAFCSVRLLVASTQAINLIGKQGSLIKSIQENT 166
Query: 164 GASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKRPGPNNGHS 223
GAS+RV D+ P + + IV++ G V AL + LR+ + +S
Sbjct: 167 GASVRVLSGDEVPFYAAADERIVELQGEAMKVLKALEAVVGHLRKFLV---------DNS 217
Query: 224 YLPPFPEMPPPPF-RPRHNPASPGSYPSPVGPFHSMDR-GMGPSQPFDHQ-----AAFSH 276
LP F + + R + PS HS + + P + A
Sbjct: 218 VLPLFEKTYNATISQERQADTTWVDKPS----LHSASQPSIVTDIPLSTKRDSLFADRES 273
Query: 277 GMDPMVPPNSDRIPFPYGSERPGHG---PTFDRPPSPRSWTPQGVGGGDPRGFDASSGFT 333
+D ++PP++ + YG + G RP +P
Sbjct: 274 QLDSLLPPSTMSM---YGQDSSLSGLRSSALSRPSAP----------------------- 307
Query: 334 PRNRPVESGNHAAILTSTTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGA 393
I+T+ + IP Y + G +N+ +IR+ SGA + V + +
Sbjct: 308 ------------PIVTTVIQTMQIPLSYAEDIIGIQGTNIEYIRRTSGAILTVQESRV-P 354
Query: 394 TEGVVMVSGTSDQMRAAQSLIHAFI 418
E +V + GTS Q++ AQ LI I
Sbjct: 355 DEIIVEIKGTSSQVQTAQQLIQEVI 379
>gi|224097170|ref|XP_002310862.1| predicted protein [Populus trichocarpa]
gi|222853765|gb|EEE91312.1| predicted protein [Populus trichocarpa]
Length = 245
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 62/150 (41%), Positives = 90/150 (60%), Gaps = 8/150 (5%)
Query: 47 EEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSE 106
+ +V F+++C G +IG GGS+VR QN+TGASI A + +S++R+V +SA EN E
Sbjct: 79 QSQVQFRMICSHGAAGRIIGTGGSVVRALQNQTGASIIFARPITNSDDRLVTVSALENLE 138
Query: 107 MRHSPAQDAVMRVHSRIAE--------IGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSE 158
HSPAQ+A++ V +R E +G V A LL+ S ++ CL+GRGG + SE
Sbjct: 139 SSHSPAQNALLLVFARSIEHDIERARSLGLIEEITVTATLLLPSNKVYCLIGRGGRVDSE 198
Query: 159 MRRATGASIRVFPKDQAPRCGSPHDEIVQV 188
M TGA I++ DQ S +D +VQV
Sbjct: 199 MIETTGADIQIMQGDQFFDLASKNDAVVQV 228
>gi|224097168|ref|XP_002310861.1| predicted protein [Populus trichocarpa]
gi|222853764|gb|EEE91311.1| predicted protein [Populus trichocarpa]
Length = 404
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 64/148 (43%), Positives = 91/148 (61%), Gaps = 8/148 (5%)
Query: 49 EVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMR 108
+V F+++C GS+IGKGGS+VR QN+TGASI +A + +S+ R+V +SA EN E
Sbjct: 255 QVQFRMICPHGAAGSIIGKGGSVVRALQNQTGASIILAPPITNSDGRLVTVSALENLESS 314
Query: 109 HSPAQDAVMRVHSRIAE--------IGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSEMR 160
HSPAQ+A++ V +R E +G V A LL+ S ++ CL+ RGG I SEM
Sbjct: 315 HSPAQNALLLVFARSIEHDIERARSLGLIEEITVTATLLLPSNRVSCLIERGGRIDSEMI 374
Query: 161 RATGASIRVFPKDQAPRCGSPHDEIVQV 188
TGA I++ DQ C S +D ++QV
Sbjct: 375 ETTGADIQILQGDQFFYCASNNDVVLQV 402
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 57/175 (32%), Positives = 96/175 (54%), Gaps = 17/175 (9%)
Query: 49 EVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVV---------- 98
+V F+++CH K+G+LIG GS++ + ETG + + + SE R +V
Sbjct: 25 QVAFRVVCHASKIGALIGHSGSVISQIRLETGCLVHCEEAVKGSEHRAIVVAGSASPERK 84
Query: 99 ISARENSEMRHSPAQDAVMRVHSRIAEI-GFEPGQAV--VARLLVHSQQIGCLLGRGGHI 155
I+ E+ + S AQ+AV+RV R+ E+ + G LL ++ QIG ++GR G
Sbjct: 85 IAVGEDETVEVSAAQEAVVRVLERMWEVDAVKDGGDCEGYCGLLANTSQIGAVVGREGRN 144
Query: 156 VSEMRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYH-SVQDALFHITSRLRET 209
+ M+RA+GA I + P AP C D+++Q+ G+ +V+ A+ ITS L++
Sbjct: 145 IKRMKRASGAHIWILP---APLCALKEDQLIQITGSSTVAVKKAVIAITSCLQDC 196
>gi|255562910|ref|XP_002522460.1| nucleic acid binding protein, putative [Ricinus communis]
gi|223538345|gb|EEF39952.1| nucleic acid binding protein, putative [Ricinus communis]
Length = 559
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 65/191 (34%), Positives = 101/191 (52%), Gaps = 31/191 (16%)
Query: 48 EEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEM 107
E+ V++ LC L K+GS+IG+GG I + ++E+ ++I+I++ + EERIV I + NSE
Sbjct: 48 EDTVYRYLCPLRKIGSIIGRGGEIAKQLRSESKSNIRISEAMAGFEERIVTIYS--NSEE 105
Query: 108 RH---------SPAQDAVMRVHSRI--------------------AEIGFEPGQAVVARL 138
+ PAQDA+ VH RI E G Q V R+
Sbjct: 106 SNLFGDSGEFVCPAQDALFMVHDRIIAEDLNNSNNNNEEEDDEEEEEFGESKEQVVTVRM 165
Query: 139 LVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDA 198
LV + QIGC++G+GG ++ +R TGA IR+ + P DE++ +IG V+ A
Sbjct: 166 LVPADQIGCVIGKGGQVIQSIRSETGAQIRILKDEHLPPLALSSDELLLIIGEPAVVRKA 225
Query: 199 LFHITSRLRET 209
L+ + +RL E
Sbjct: 226 LYQVATRLHEN 236
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 62/165 (37%), Positives = 91/165 (55%), Gaps = 13/165 (7%)
Query: 76 QNETGASIKIADILPDSEERIVVISARENSEMRHSPAQDAVMRVHSRIAE-IGFEPGQAV 134
+ E+ ASIK+ + ++ I+ ISA+E E S A +R+ R +E + G +V
Sbjct: 323 RQESRASIKVDSSAAEGDDCIIFISAKEFFE-DQSATLTAALRLQPRCSEKTERDSGDSV 381
Query: 135 VA-RLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYH 193
+ RLLV QIGCL+G+GG I+SEMR T ASIR+ +D P+ S DE+VQ+ G++
Sbjct: 382 ITTRLLVPRSQIGCLMGKGGAIISEMRNVTRASIRILAEDNLPKVASEDDEMVQITGSHD 441
Query: 194 SVQDALFHITSRLRETIFPMKRPGPNNGHSYLPPFPEMPPPPFRP 238
+AL H+ RL+ +F R G L FP P P+ P
Sbjct: 442 VASNALLHVVLRLKANLFG--RDGA------LTAFP--PALPYIP 476
Score = 40.8 bits (94), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 29/39 (74%)
Query: 47 EEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKI 85
E+ V ++L D++G +IGKGG ++++ ++ETGA I+I
Sbjct: 158 EQVVTVRMLVPADQIGCVIGKGGQVIQSIRSETGAQIRI 196
>gi|15237393|ref|NP_199431.1| RNA-binding KH domain-containing protein [Arabidopsis thaliana]
gi|9757739|dbj|BAB08264.1| unnamed protein product [Arabidopsis thaliana]
gi|14532588|gb|AAK64022.1| unknown protein [Arabidopsis thaliana]
gi|21280941|gb|AAM44907.1| unknown protein [Arabidopsis thaliana]
gi|332007968|gb|AED95351.1| RNA-binding KH domain-containing protein [Arabidopsis thaliana]
Length = 644
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 58/183 (31%), Positives = 106/183 (57%), Gaps = 7/183 (3%)
Query: 39 GGRNRMFYEEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPD-SEERIV 97
GG +R E++ K++C K+G +IGKGG ++ + +G+ I++ D + ++ ++
Sbjct: 309 GGSSR---SEKLAIKVICSSSKIGRVIGKGGLTIKGIRQASGSHIEVNDSRTNHDDDCVI 365
Query: 98 VISARENSEMRHSPAQDAVMRVHSRIAEIGFEPGQAVVARLLVHSQQIGCLLGRGGHIVS 157
++A E+ + S A +AV+ + +I + E V +LLV S+ IGC++G+ G I+S
Sbjct: 366 TVTATESPDDLKSMAVEAVLLLQEKIND---EDEDKVKMQLLVSSKVIGCIIGKSGSIIS 422
Query: 158 EMRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKRPG 217
E+R+ T A I + + P+C P+DE+V++ G +V+DAL I RLR+ + + G
Sbjct: 423 EIRKRTKADIHISKGNNTPKCADPNDELVEISGEVSNVRDALIQIVLRLRDDVLRDRETG 482
Query: 218 PNN 220
N
Sbjct: 483 SRN 485
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 96/380 (25%), Positives = 150/380 (39%), Gaps = 79/380 (20%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISAR------- 102
VV+++LC +GS+IGK G ++ + ET A IK+ D P ER++ I
Sbjct: 44 VVYRILCPSGVMGSVIGKSGKVINLIRQETRARIKVVDPFPGCSERVITIFCSVSEKKDI 103
Query: 103 ---ENSEMRHS----PAQDAVMRVHSRI-AEIGFEPGQAVV-------ARLLVHSQQIGC 147
E SE+ +S AQ A+++VH I A + + RLLV S Q
Sbjct: 104 VDIEYSELDYSVPLCSAQAALLKVHDAIVASLATAAENTKIDRDDFRECRLLVPSSQCSI 163
Query: 148 LLGRGGHIVSEMRRATGASIRVFPKDQAP---RCGSPHDEIVQVIGNYHSVQDALFHITS 204
++G+ G I+ +R T A+++V KD + C D IV + G SV+ ALF +++
Sbjct: 164 VIGKSGSIIKNIRGRTRANVKVVSKDVSDPSHTCAMDFDNIVMISGETESVKKALFAVSA 223
Query: 205 RLRETIFPMKRPGPNNGHSYLPPFPEMPPPPFRPRHNPASPGSYPSPVGPFHSMDRGMGP 264
M + P E+P P+ YP G+ P
Sbjct: 224 -------IMYKVSPREQIPLDTTVQEVPASIII----PSDLSIYPQA---------GLYP 263
Query: 265 SQPFDHQAAFSHGMDPMVPPNSDRIPFPYGSERPGHGPTFDRPPSPRSWTPQGVGGGDPR 324
SQ + F HG + V +P YG P F P G GG
Sbjct: 264 SQ----DSIFQHGAN--VSSFIGTLPQGYGENAANPVPVFSASALP---VVHGFGG---- 310
Query: 325 GFDASSGFTPRNRPVESGNHAAILTSTTIEVVIPQLYMAHVYGENNSNLSHIRQISGANV 384
+ R+ + I+V+ + V G+ + IRQ SG+++
Sbjct: 311 --------SSRSEKL------------AIKVICSSSKIGRVIGKGGLTIKGIRQASGSHI 350
Query: 385 VVNDPKPG-ATEGVVMVSGT 403
VND + + V+ V+ T
Sbjct: 351 EVNDSRTNHDDDCVITVTAT 370
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 44/70 (62%)
Query: 350 STTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATEGVVMVSGTSDQMRA 409
STT+EV IP + V G NL +IR+ISGA + ++D K V ++SGTS+Q R
Sbjct: 573 STTMEVRIPANAVGKVMGRGGGNLDNIRRISGAMIEISDSKNSHGGRVALISGTSEQKRT 632
Query: 410 AQSLIHAFIL 419
A++L AFI+
Sbjct: 633 AENLFQAFIM 642
>gi|356528013|ref|XP_003532600.1| PREDICTED: poly(rC)-binding protein 3-like [Glycine max]
Length = 167
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 63/165 (38%), Positives = 99/165 (60%), Gaps = 9/165 (5%)
Query: 30 SSGPGHETVGGRNRMFYEEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADIL 89
+S P H Y V F+LLCH +VG++IGK G ++++ Q TGA I+I D
Sbjct: 5 NSNPNHSNAHVNRSRHYTTHVTFRLLCHASRVGAIIGKSGVLIKSLQEATGAKIRIVDAP 64
Query: 90 PDSEERIVVISA---RENSEMRHSPAQDAVMRVHSRIAEI--GFEPGQAVVA-RLLVHSQ 143
PDS +R++++SA E+ E+ S AQ+A+++V R+ ++ G E G VV+ RLL +
Sbjct: 65 PDSPDRVILVSAPSVTEDGEL--STAQEALLKVFDRVLDVAAGTEVGDLVVSCRLLAETS 122
Query: 144 QIGCLLGRGGHIVSEMRRATGASIRVFPKDQAPRCGSPHDEIVQV 188
Q+G ++G+ G +V ++R TG IRV + P +P DEIV+V
Sbjct: 123 QVGAVIGKAGKVVEKIRMDTGCKIRVL-NEGLPAGTAPSDEIVEV 166
>gi|13605589|gb|AAK32788.1|AF361620_1 AT5g46190/MCL19_25 [Arabidopsis thaliana]
Length = 640
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 58/183 (31%), Positives = 106/183 (57%), Gaps = 7/183 (3%)
Query: 39 GGRNRMFYEEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPD-SEERIV 97
GG +R E++ K++C K+G +IGKGG ++ + +G+ I++ D + ++ ++
Sbjct: 309 GGSSR---SEKLAIKVICSSSKIGRVIGKGGLTIKGIRQASGSHIEVNDSRTNHDDDCVI 365
Query: 98 VISARENSEMRHSPAQDAVMRVHSRIAEIGFEPGQAVVARLLVHSQQIGCLLGRGGHIVS 157
++A E+ + S A +AV+ + +I + E V +LLV S+ IGC++G+ G I+S
Sbjct: 366 TVTATESPDDLKSMAVEAVLLLQEKIND---EDEDKVKMQLLVSSKVIGCIIGKSGSIIS 422
Query: 158 EMRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKRPG 217
E+R+ T A I + + P+C P+DE+V++ G +V+DAL I RLR+ + + G
Sbjct: 423 EIRKRTKADIHISKGNNTPKCADPNDELVEISGEVSNVRDALIQIVLRLRDDVLRDRETG 482
Query: 218 PNN 220
N
Sbjct: 483 SRN 485
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 96/380 (25%), Positives = 150/380 (39%), Gaps = 79/380 (20%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISAR------- 102
VV+++LC +GS+IGK G ++ + ET A IK+ D P ER++ I
Sbjct: 44 VVYRILCPSGVMGSVIGKSGKVINLIRQETRARIKVVDPFPGCSERVITIFCSVSEKKDI 103
Query: 103 ---ENSEMRHS----PAQDAVMRVHSRI-AEIGFEPGQAVV-------ARLLVHSQQIGC 147
E SE+ +S AQ A+++VH I A + + RLLV S Q
Sbjct: 104 VDIEYSELDYSVPLCSAQAALLKVHDAIVASLATAAENTKIDRDDFRECRLLVPSSQCSI 163
Query: 148 LLGRGGHIVSEMRRATGASIRVFPKDQAP---RCGSPHDEIVQVIGNYHSVQDALFHITS 204
++G+ G I+ +R T A+++V KD + C D IV + G SV+ ALF +++
Sbjct: 164 VIGKSGSIIKNIRGRTRANVKVVSKDVSDPSHTCAMDFDNIVMISGETESVKKALFAVSA 223
Query: 205 RLRETIFPMKRPGPNNGHSYLPPFPEMPPPPFRPRHNPASPGSYPSPVGPFHSMDRGMGP 264
M + P E+P P+ YP G+ P
Sbjct: 224 -------IMYKVSPREQIPLDTTVQEVPASIII----PSDLSIYPQA---------GLYP 263
Query: 265 SQPFDHQAAFSHGMDPMVPPNSDRIPFPYGSERPGHGPTFDRPPSPRSWTPQGVGGGDPR 324
SQ + F HG + V +P YG P F P G GG
Sbjct: 264 SQ----DSIFQHGAN--VSSFIGTLPQGYGENAANPVPVFSASALP---VVHGFGG---- 310
Query: 325 GFDASSGFTPRNRPVESGNHAAILTSTTIEVVIPQLYMAHVYGENNSNLSHIRQISGANV 384
+ R+ + I+V+ + V G+ + IRQ SG+++
Sbjct: 311 --------SSRSEKL------------AIKVICSSSKIGRVIGKGGLTIKGIRQASGSHI 350
Query: 385 VVNDPKPG-ATEGVVMVSGT 403
VND + + V+ V+ T
Sbjct: 351 EVNDSRTNHDDDCVITVTAT 370
>gi|294460460|gb|ADE75808.1| unknown [Picea sitchensis]
Length = 131
Score = 111 bits (277), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 65/129 (50%), Positives = 92/129 (71%), Gaps = 2/129 (1%)
Query: 297 RPGHGPTFDRPPSPRSWTPQGVGGGDPRGF-DASSGFTPRNRPVESGNHAAILTSTTIEV 355
RPG D+PPSP W QG+G G R D GF P+ + SG+ +A++T+TT+EV
Sbjct: 3 RPGMHHNIDQPPSPGPWAVQGIGAGSARSMTDYGRGF-PQRGSLGSGSQSAVVTNTTVEV 61
Query: 356 VIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATEGVVMVSGTSDQMRAAQSLIH 415
V+P+ + +YGEN +NL+ IRQISGA V+++DP+PGATEG+V++SGT +Q AAQSL+
Sbjct: 62 VVPERVIGSIYGENGNNLTQIRQISGAKVIIHDPRPGATEGLVVISGTPEQTHAAQSLLQ 121
Query: 416 AFILCGVTS 424
AFI+ G +S
Sbjct: 122 AFIMSGQSS 130
>gi|186478468|ref|NP_001117282.1| RNA-binding KH domain-containing protein [Arabidopsis thaliana]
gi|5080792|gb|AAD39302.1|AC007576_25 Unknown protein [Arabidopsis thaliana]
gi|332190995|gb|AEE29116.1| RNA-binding KH domain-containing protein [Arabidopsis thaliana]
Length = 479
Score = 111 bits (277), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 64/182 (35%), Positives = 100/182 (54%), Gaps = 23/182 (12%)
Query: 48 EEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEM 107
E+ V++ LC + K GS+IGKGG I + ++ET ++++I + LP EER+V + + N E+
Sbjct: 42 EDTVYRYLCPVKKTGSIIGKGGEIAKQIRSETKSNMRINEALPGCEERVVTMYS-TNEEL 100
Query: 108 RH--------SPAQDAVMRVHSRIA-----------EIGFEPGQAVVARLLVHSQQIGCL 148
H PA DA+ +VH + + Q V R+LV S QIGC+
Sbjct: 101 NHFGDDGELVCPALDALFKVHDMVVADADQDDGTDDDNDLGEKQTVTVRMLVPSDQIGCV 160
Query: 149 LGRGGHIVSEMRRATGASIRVFPKDQAPRCGSP--HDEIVQVIGNYHSVQDALFHITSRL 206
+G+GG ++ +R T A IRV KD P C HDE++ +IG V++AL+ + S L
Sbjct: 161 IGKGGQVIQNLRNDTNAQIRVI-KDHLPACALTLSHDELLLIIGEPLVVREALYQVASLL 219
Query: 207 RE 208
+
Sbjct: 220 HD 221
Score = 101 bits (251), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 60/164 (36%), Positives = 94/164 (57%), Gaps = 9/164 (5%)
Query: 72 VRTFQNETGASIKIADILPDSEERIVVISARENSEMRHSPAQDAVMRVHSRIAE-IGFEP 130
+ + ETGA+I++ D ++ I+ IS++E E SPA +A +R+ R +E +G +
Sbjct: 291 INQIRQETGATIRVNTSETDDDDCIIFISSKEFYE-DQSPAVNAAIRLQQRCSEKVGKDA 349
Query: 131 GQ-AVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAPRCGSPHDEIVQVI 189
A+ RLLV S QIGCL+G+GG ++SEMR T A+IR+ K+ P+ +E+VQ+
Sbjct: 350 NDLAISTRLLVSSSQIGCLIGKGGAVISEMRSVTRANIRILQKEDVPKIAREDEEMVQIT 409
Query: 190 GNYHSVQDALFHITSRLRETIFPMKRPGPNNGHSYLPP-FPEMP 232
G+ + AL + RLR F M ++G LP FP +P
Sbjct: 410 GSPDAAMKALTQVILRLRANSFDM-----DHGLVLLPTSFPYIP 448
>gi|30683629|ref|NP_172869.2| RNA-binding KH domain-containing protein [Arabidopsis thaliana]
gi|30102666|gb|AAP21251.1| At1g14170 [Arabidopsis thaliana]
gi|110743444|dbj|BAE99608.1| hypothetical protein [Arabidopsis thaliana]
gi|332190993|gb|AEE29114.1| RNA-binding KH domain-containing protein [Arabidopsis thaliana]
Length = 454
Score = 111 bits (277), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 64/182 (35%), Positives = 100/182 (54%), Gaps = 23/182 (12%)
Query: 48 EEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEM 107
E+ V++ LC + K GS+IGKGG I + ++ET ++++I + LP EER+V + + N E+
Sbjct: 17 EDTVYRYLCPVKKTGSIIGKGGEIAKQIRSETKSNMRINEALPGCEERVVTMYS-TNEEL 75
Query: 108 RH--------SPAQDAVMRVHSRIA-----------EIGFEPGQAVVARLLVHSQQIGCL 148
H PA DA+ +VH + + Q V R+LV S QIGC+
Sbjct: 76 NHFGDDGELVCPALDALFKVHDMVVADADQDDGTDDDNDLGEKQTVTVRMLVPSDQIGCV 135
Query: 149 LGRGGHIVSEMRRATGASIRVFPKDQAPRCGSP--HDEIVQVIGNYHSVQDALFHITSRL 206
+G+GG ++ +R T A IRV KD P C HDE++ +IG V++AL+ + S L
Sbjct: 136 IGKGGQVIQNLRNDTNAQIRVI-KDHLPACALTLSHDELLLIIGEPLVVREALYQVASLL 194
Query: 207 RE 208
+
Sbjct: 195 HD 196
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 73/216 (33%), Positives = 113/216 (52%), Gaps = 9/216 (4%)
Query: 20 YAPGYHSRGYSSGPGHETVGGRNRMFYEEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNET 79
+ PG + H R + E +C + VG +IGKGG + + ET
Sbjct: 214 HQPGAMLMSAALTSSHRNYAVRRDIADAREFCVCFICPAENVGGVIGKGGGFINQIRQET 273
Query: 80 GASIKIADILPDSEERIVVISARENSEMRHSPAQDAVMRVHSRIAE-IGFEPGQ-AVVAR 137
GA+I++ D ++ I+ IS++E E SPA +A +R+ R +E +G + A+ R
Sbjct: 274 GATIRVNTSETDDDDCIIFISSKEFYE-DQSPAVNAAIRLQQRCSEKVGKDANDLAISTR 332
Query: 138 LLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQD 197
LLV S QIGCL+G+GG ++SEMR T A+IR+ K+ P+ +E+VQ+ G+ +
Sbjct: 333 LLVSSSQIGCLIGKGGAVISEMRSVTRANIRILQKEDVPKIAREDEEMVQITGSPDAAMK 392
Query: 198 ALFHITSRLRETIFPMKRPGPNNGHSYLPP-FPEMP 232
AL + RLR F M ++G LP FP +P
Sbjct: 393 ALTQVILRLRANSFDM-----DHGLVLLPTSFPYIP 423
>gi|147789222|emb|CAN69137.1| hypothetical protein VITISV_022037 [Vitis vinifera]
Length = 587
Score = 111 bits (277), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 56/154 (36%), Positives = 91/154 (59%), Gaps = 16/154 (10%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISA-------- 101
V F+LLCH ++G +IGK G IV+ Q++TGA I++ D S+ R++++ A
Sbjct: 51 VAFRLLCHASRIGGVIGKSGVIVKQLQSDTGARIRVEDSPSTSDHRVILVIAPASVNRRI 110
Query: 102 ---RENSEMRHSPAQDAVMRVHSRIAEI-----GFEPGQAVVARLLVHSQQIGCLLGRGG 153
+ E+ S AQ+AV+RV RI E+ G PG V RLL + Q+G ++G+GG
Sbjct: 111 ALQGSSEEVEASAAQEAVLRVFERILEVAAVVDGVPPGGVVSCRLLAETSQVGSVIGKGG 170
Query: 154 HIVSEMRRATGASIRVFPKDQAPRCGSPHDEIVQ 187
+V ++RR +G+ I+V ++ P C + DE+V+
Sbjct: 171 KVVEKIRRESGSKIKVLTAEKLPTCAASTDEMVE 204
>gi|359489188|ref|XP_002272998.2| PREDICTED: KH domain-containing protein At4g18375-like [Vitis
vinifera]
Length = 343
Score = 111 bits (277), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 69/206 (33%), Positives = 114/206 (55%), Gaps = 21/206 (10%)
Query: 42 NRMFYEEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISA 101
R ++V+F+++ ++G +IGK GS ++ + ET A+IKIAD + EER+++IS+
Sbjct: 52 KRRAKNQDVLFRIVVPSRQIGKVIGKEGSRIQKIREETKATIKIADAIARHEERVIIISS 111
Query: 102 RENSEMRHSPAQDAVMRVHSRIAE----------IGFEPGQAVVARLLVHSQQIGCLLGR 151
++ SE S A++A+++V S I + +G A RLL+ Q GCL+G
Sbjct: 112 KD-SENVISDAENALLQVASLILKEDDSNTDALKVGVGHVVANAIRLLIAGSQAGCLIGM 170
Query: 152 GGHIVSEMRRATGASIRVFPKDQAPRCGSPH--DEIVQVIGNYHSVQDALFHITSRLRE- 208
G + ++R ++GA+I + P++Q P C S H D +VQ+ G+ +V AL I +LRE
Sbjct: 171 SGQNIEKLRNSSGATITILPQNQLPLCASAHDSDRMVQISGDVPAVLKALEEIGCQLREN 230
Query: 209 ------TIFPMKRPGPN-NGHSYLPP 227
+I P+ P N YL P
Sbjct: 231 PPRQVISISPIYNPNTNRTSQQYLDP 256
>gi|297734587|emb|CBI16638.3| unnamed protein product [Vitis vinifera]
Length = 346
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 69/206 (33%), Positives = 114/206 (55%), Gaps = 21/206 (10%)
Query: 42 NRMFYEEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISA 101
R ++V+F+++ ++G +IGK GS ++ + ET A+IKIAD + EER+++IS+
Sbjct: 52 KRRAKNQDVLFRIVVPSRQIGKVIGKEGSRIQKIREETKATIKIADAIARHEERVIIISS 111
Query: 102 RENSEMRHSPAQDAVMRVHSRIAE----------IGFEPGQAVVARLLVHSQQIGCLLGR 151
++ SE S A++A+++V S I + +G A RLL+ Q GCL+G
Sbjct: 112 KD-SENVISDAENALLQVASLILKEDDSNTDALKVGVGHVVANAIRLLIAGSQAGCLIGM 170
Query: 152 GGHIVSEMRRATGASIRVFPKDQAPRCGSPH--DEIVQVIGNYHSVQDALFHITSRLRE- 208
G + ++R ++GA+I + P++Q P C S H D +VQ+ G+ +V AL I +LRE
Sbjct: 171 SGQNIEKLRNSSGATITILPQNQLPLCASAHDSDRMVQISGDVPAVLKALEEIGCQLREN 230
Query: 209 ------TIFPMKRPGPN-NGHSYLPP 227
+I P+ P N YL P
Sbjct: 231 PPRQVISISPIYNPNTNRTSQQYLDP 256
>gi|242040159|ref|XP_002467474.1| hypothetical protein SORBIDRAFT_01g028800 [Sorghum bicolor]
gi|241921328|gb|EER94472.1| hypothetical protein SORBIDRAFT_01g028800 [Sorghum bicolor]
Length = 452
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 104/385 (27%), Positives = 172/385 (44%), Gaps = 69/385 (17%)
Query: 51 VFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMRHS 110
VF+L+ + KVGS+IG+ G +++ ET A ++I + + ERIV++S +E+ +
Sbjct: 51 VFRLVVPVLKVGSIIGRKGELIKRLVEETKARVRILEGPVGATERIVLVSGKEDPGLELP 110
Query: 111 PAQDAVMRVHSRIAEIGFEPGQA-----------VVARLLVHSQQIGCLLGRGGHIVSEM 159
PA DA+MRV R+ IG G A ARLLV Q L+G+ G + +
Sbjct: 111 PAMDALMRVFKRV--IGITDGAAEGTQAAATPGVCAARLLVPGAQAINLIGKQGATIKAI 168
Query: 160 RRATGASIRVFPKDQAPR--CGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKRPG 217
+ +TGA+IRV D+ R + + I+++ G+ V AL +++ LR+ +
Sbjct: 169 QESTGATIRVISVDERERPFYVTDDERIIEIQGDTEKVLKALQAVSNHLRKFLV------ 222
Query: 218 PNNGHSYLPPFPEMPPPPFRPRH-NPASPGSYPSPVG------PFHSMDRGMGPSQPFDH 270
HS LP F + + R+ + S S+PS +G P +D + P +
Sbjct: 223 ---DHSVLPLFEKTNTTVSQDRNGDGWSDMSHPS-IGSAQVNQPPSVVDEYILPVK---- 274
Query: 271 QAAFSHGMDPMVPPNSDRIPFPYGSERPGHGPTFDRPPSPRSWTPQGVGGGDPRGFDASS 330
+ + +P+V N R + R P+ + P G+ G P
Sbjct: 275 RESLYLEREPLVDHNIHRSGVSL----------YGRDPALSTLRPSGIHGAGP------- 317
Query: 331 GFTPRNRPVESGNHAAILTSTTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPK 390
+LT T + IP Y + G +N+++IR SGA V + +
Sbjct: 318 ----------------LLTQITQTMQIPLTYAEDIIGVKGANIAYIRANSGAVVTIQESL 361
Query: 391 PGATEGVVMVSGTSDQMRAAQSLIH 415
+ V + GTS Q++AAQ LI
Sbjct: 362 GSPDDITVEIKGTSSQVQAAQQLIQ 386
>gi|449463577|ref|XP_004149510.1| PREDICTED: LOW QUALITY PROTEIN: poly(rC)-binding protein 3-like
[Cucumis sativus]
Length = 468
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 106/383 (27%), Positives = 167/383 (43%), Gaps = 65/383 (16%)
Query: 49 EVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMR 108
+ VF+L+ + KVGS+IG+ G +++ ET A I++ D + +R+V+IS +E E
Sbjct: 80 DCVFRLIVPVVKVGSIIGRKGDLIKKMCEETRARIRVLDGAVGTPDRVVLISGKEELESP 139
Query: 109 HSPAQDAVMRVHSRIAEIGFEPGQAVVA----RLLVHSQQIGCLLGRGGHIVSEMRRATG 164
SPA DAV+RV R++ + +A + RLLV S Q L+G+ G ++ ++ +TG
Sbjct: 140 LSPAMDAVIRVFKRVSGLSENEDEAKASFCSIRLLVASTQAINLIGKQGSLIKSIQESTG 199
Query: 165 ASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKRPGPNNGHSY 224
AS+RV D+ P + +V++ G V AL + LR+ + HS
Sbjct: 200 ASVRVLSGDEMPFYAGADERMVELQGESLKVLKALEGVVGHLRKFLV---------DHSV 250
Query: 225 LPPFPE---MPPPPFRPRHNPASPGSYPSPVGPFHSMDRGMGPSQP-----FDHQAAFSH 276
LP F + P R A S + S + PS D +A F
Sbjct: 251 LPLFEKSFNTPASQDRQTETWADKSSLLTASQSIISAE--YAPSTKRESLFLDREAHFDS 308
Query: 277 GMDPMVPPNSDRIPFPYGSERPGHGPTFDRPPSPRSWTPQGVG-GGDPRGFDASSGFTPR 335
+ +S I YG +R P+ RS GVG G P
Sbjct: 309 HI------SSSGISL-YGQDRV--------LPTIRS---SGVGRSGGP------------ 338
Query: 336 NRPVESGNHAAILTSTTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATE 395
I+T T + IP Y + G +N++ IR+ SGA + + + + E
Sbjct: 339 -----------IVTQVTQTMQIPLSYAEDIIGVGGTNIAFIRRNSGAILTIQESRGLPDE 387
Query: 396 GVVMVSGTSDQMRAAQSLIHAFI 418
V + GTS Q++ AQ LI +
Sbjct: 388 ITVEIKGTSSQVQMAQQLIQEAV 410
>gi|413944062|gb|AFW76711.1| hypothetical protein ZEAMMB73_249479 [Zea mays]
Length = 426
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 83/313 (26%), Positives = 137/313 (43%), Gaps = 61/313 (19%)
Query: 111 PAQDAVMRVHSRIAEIGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVF 170
PAQ+AV+ + + I ++G + + RLLV + +I C GR G + S+++R T A++++
Sbjct: 162 PAQEAVLHIQTHIVDLGPDMDNIITTRLLVPASEIACFDGREGSL-SDIQRQTSANVQIL 220
Query: 171 PKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKRPGPNNGHSYLPPFPE 230
P++ P C DE++Q++G + ++AL +T++LR S+L + E
Sbjct: 221 PREDLPSCALESDELIQIVGEIKAARNALIQVTTKLR---------------SFL--YRE 263
Query: 231 MPPPPFRPR---HNPASPGSYPSPVGPFHSMDRGMGPSQPFDHQAAFSHGMDPMVPPNSD 287
MP P H SP + SP GP+ D MG A H D
Sbjct: 264 MPDPIQVGNINLHGAISPVA-GSPRGPYQGNDIPMGAYHQASQLATSWHSKDS------- 315
Query: 288 RIPFPYGSERPGHGPTFDRPPSPRSWTPQGVGGGDPRGFDASSGFTPRNRPVESGNHAA- 346
GG F+ S R + A
Sbjct: 316 -------------------------------GGSASGSFEQGSNINDDIRQSATKRFAVP 344
Query: 347 ILTSTTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATEGVVMVSGTSDQ 406
++T +T+E+VIP +A + S L+ I +ISGA V + + + + VV +SGT +Q
Sbjct: 345 LVTRSTLEIVIPNSAVASLTMRAGSKLAQISEISGAAVTLAEDRSDILQKVVRISGTPEQ 404
Query: 407 MRAAQSLIHAFIL 419
A++L+ FIL
Sbjct: 405 ASKAENLLQGFIL 417
>gi|79317957|ref|NP_001031044.1| RNA-binding KH domain-containing protein [Arabidopsis thaliana]
gi|222424209|dbj|BAH20063.1| AT1G14170 [Arabidopsis thaliana]
gi|332190994|gb|AEE29115.1| RNA-binding KH domain-containing protein [Arabidopsis thaliana]
Length = 446
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 63/181 (34%), Positives = 99/181 (54%), Gaps = 23/181 (12%)
Query: 49 EVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMR 108
+ V++ LC + K GS+IGKGG I + ++ET ++++I + LP EER+V + + N E+
Sbjct: 10 DTVYRYLCPVKKTGSIIGKGGEIAKQIRSETKSNMRINEALPGCEERVVTMYS-TNEELN 68
Query: 109 H--------SPAQDAVMRVHSRIA-----------EIGFEPGQAVVARLLVHSQQIGCLL 149
H PA DA+ +VH + + Q V R+LV S QIGC++
Sbjct: 69 HFGDDGELVCPALDALFKVHDMVVADADQDDGTDDDNDLGEKQTVTVRMLVPSDQIGCVI 128
Query: 150 GRGGHIVSEMRRATGASIRVFPKDQAPRCGSP--HDEIVQVIGNYHSVQDALFHITSRLR 207
G+GG ++ +R T A IRV KD P C HDE++ +IG V++AL+ + S L
Sbjct: 129 GKGGQVIQNLRNDTNAQIRVI-KDHLPACALTLSHDELLLIIGEPLVVREALYQVASLLH 187
Query: 208 E 208
+
Sbjct: 188 D 188
Score = 101 bits (251), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 73/216 (33%), Positives = 113/216 (52%), Gaps = 9/216 (4%)
Query: 20 YAPGYHSRGYSSGPGHETVGGRNRMFYEEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNET 79
+ PG + H R + E +C + VG +IGKGG + + ET
Sbjct: 206 HQPGAMLMSAALTSSHRNYAVRRDIADAREFCVCFICPAENVGGVIGKGGGFINQIRQET 265
Query: 80 GASIKIADILPDSEERIVVISARENSEMRHSPAQDAVMRVHSRIAE-IGFEPGQ-AVVAR 137
GA+I++ D ++ I+ IS++E E SPA +A +R+ R +E +G + A+ R
Sbjct: 266 GATIRVNTSETDDDDCIIFISSKEFYE-DQSPAVNAAIRLQQRCSEKVGKDANDLAISTR 324
Query: 138 LLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQD 197
LLV S QIGCL+G+GG ++SEMR T A+IR+ K+ P+ +E+VQ+ G+ +
Sbjct: 325 LLVSSSQIGCLIGKGGAVISEMRSVTRANIRILQKEDVPKIAREDEEMVQITGSPDAAMK 384
Query: 198 ALFHITSRLRETIFPMKRPGPNNGHSYLPP-FPEMP 232
AL + RLR F M ++G LP FP +P
Sbjct: 385 ALTQVILRLRANSFDM-----DHGLVLLPTSFPYIP 415
>gi|224112243|ref|XP_002316129.1| predicted protein [Populus trichocarpa]
gi|222865169|gb|EEF02300.1| predicted protein [Populus trichocarpa]
Length = 553
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 64/183 (34%), Positives = 101/183 (55%), Gaps = 21/183 (11%)
Query: 48 EEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVI-SARENSE 106
E+ V++ LC L K+GS+IGKGG I + + ++ ++I+I++ +P +ERIV I S+ E +
Sbjct: 40 EDTVYRYLCPLRKIGSIIGKGGEIAKQLRADSKSNIRISEAMPGYDERIVTIYSSSEETN 99
Query: 107 M------RHSPAQDAVMRVHSR-IAEI-------------GFEPGQAVVARLLVHSQQIG 146
+ PAQDA+ VH R IAE F Q V R+LV + QIG
Sbjct: 100 LFGETGEYVCPAQDALFMVHDRVIAEDLNNAAAEEEEGEDNFGEVQQVTVRMLVPADQIG 159
Query: 147 CLLGRGGHIVSEMRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRL 206
C++G+GG ++ +R T A IR+ D P DE++ + G +V+ AL+ + +RL
Sbjct: 160 CVIGKGGQVIQNIRSETCAQIRITKDDHLPPLALSIDELLLIHGEPSAVRKALYQVATRL 219
Query: 207 RET 209
E
Sbjct: 220 HEN 222
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 71/198 (35%), Positives = 102/198 (51%), Gaps = 26/198 (13%)
Query: 76 QNETGASIKIADILPDSEERIVVISARENSEMRHSPAQDAVMRVHSRIAE-IGFEPGQAV 134
+ E+ ASIK+ + ++ I+ ISA+E E SP +A +R+ R ++ E G +V
Sbjct: 305 RQESRASIKVDSSGAEGDDCIIFISAKEFFE-DQSPTMNAALRLQPRCSDKTEKESGDSV 363
Query: 135 VA-RLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAPRCGSPHDEIVQV-IGNY 192
+ RLLV QIGCL+G+GG I+SEMR T A+IR+ +D P+ DE+VQV + N+
Sbjct: 364 ITTRLLVGRSQIGCLMGKGGAIISEMRNQTRANIRIISEDNLPKVAVEDDEMVQVNVYNF 423
Query: 193 HSVQ---------DALFHITSRLRETIFPMKRPGPNNGHSYLPPFPEMPPPPFRPRHNPA 243
+SVQ +AL + RL+ +F R G L FP P P+ P
Sbjct: 424 NSVQITGSLEVASNALLQVILRLKANLFG--RDGA------LTAFP--PALPYIPMSLDT 473
Query: 244 SPGSYPSPVGPFHSMDRG 261
S G S G S RG
Sbjct: 474 SDG---SKYGSRDSQSRG 488
>gi|413933627|gb|AFW68178.1| nucleic acid binding protein [Zea mays]
Length = 637
Score = 107 bits (268), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 109/384 (28%), Positives = 167/384 (43%), Gaps = 55/384 (14%)
Query: 49 EVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMR 108
E VF++L KVG++IG+ G ++ ET A IKI D P ER V+ISA++ +
Sbjct: 230 ESVFRILVPAQKVGAIIGRKGEFIKKMCEETKARIKILDGPPGVPERAVMISAKDEPDAP 289
Query: 109 HSPAQDAVMRVHSRIAEIG--------FEPGQAVVARLLVHSQQIGCLLGRGGHIVSEMR 160
SPA D ++RVH RI + G RLLV S Q G L+G+ G + ++
Sbjct: 290 LSPAMDGLLRVHKRITDSSDGESSQPQRSAGNIGPTRLLVPSSQAGSLIGKQGATIKSIQ 349
Query: 161 RATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKRPGPNN 220
++ + +R+ + P D +V++ G VQ+A+ I+S LR+ F + R
Sbjct: 350 DSSKSIVRIV--ENVPPVALNDDRVVEIQGEPLGVQEAVELISSHLRK--FLVDR----- 400
Query: 221 GHSYLPPFPEMPPPPFRPRHNPASPGSYPSPVGPFHSMDRGMGPSQPFDHQAAFSHGMDP 280
S LP F PR P P P GP + R M P
Sbjct: 401 --SVLPLFEAHMKMHGMPREQPVPP---PQHWGPPQTWIRPPNIPPGGPGFGGNPQFMHP 455
Query: 281 MVPPNSDRIP---FPYGSERPGHGPTF---DRPPSPRSWTPQGVGGGDPRGFDASSGFTP 334
P P P+ ++P +G + + PPS S T G P
Sbjct: 456 R--PQDSYYPSPDVPHMEKQPHYGISAYGREAPPSGASAT-----GNQP----------- 497
Query: 335 RNRPVESGNHAAILTSTTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGAT 394
P +G+ A ++ IP Y V G +++S+IR+ SGA V + + +
Sbjct: 498 ---PSHAGSQVAH------DMHIPLAYADAVIGAAGASISYIRRHSGATVTIQESRGAPG 548
Query: 395 EGVVMVSGTSDQMRAAQSLIHAFI 418
E V ++GT+ Q++ AQ LI F+
Sbjct: 549 EMTVEITGTAAQVQTAQQLIQNFM 572
>gi|226502036|ref|NP_001148766.1| nucleic acid binding protein [Zea mays]
gi|195621990|gb|ACG32825.1| nucleic acid binding protein [Zea mays]
Length = 441
Score = 107 bits (268), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 103/384 (26%), Positives = 169/384 (44%), Gaps = 68/384 (17%)
Query: 51 VFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMRHS 110
VF+L+ + KVGS+IG+ G +++ T A ++I + + ERIV++S +E+ + S
Sbjct: 41 VFRLVVPVLKVGSIIGRKGELIKRLVEGTKARVRILEGPVGATERIVLVSGKEDPGLELS 100
Query: 111 PAQDAVMRVHSRIAEIGFEPGQA-----------VVARLLVHSQQIGCLLGRGGHIVSEM 159
PA DA+MRV R+ IG G A ARLLV Q L+G+ G + +
Sbjct: 101 PAMDALMRVFKRV--IGITDGAAEGTQAAATPGVCAARLLVPGAQAINLIGKQGATIKAI 158
Query: 160 RRATGASIRVFPKDQAPR--CGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKRPG 217
+ +TGA+IRV D+ R + + IV++ G+ V AL +++ LR+ +
Sbjct: 159 QESTGATIRVISVDEHERPFYVTDDERIVEIQGDTEKVLKALQAVSNHLRKFLVD----- 213
Query: 218 PNNGHSYLPPFPEMPPPPFRPRHNPASPGSYPSPVG------PFHSMDRGMGPSQPFDHQ 271
HS LP F + + + S S+PS +G P +D + P + +
Sbjct: 214 ----HSVLPLFEKTNTAVSQDHNVGWSDMSHPS-IGSAQVNQPPSVVDEYILPVK----R 264
Query: 272 AAFSHGMDPMVPPNSDRIPFPYGSERPGHGPTFDRPPSPRSWTPQGVGGGDPRGFDASSG 331
+P++ N R + R P+ + P G+ G P
Sbjct: 265 DTLYLEREPLLDHNIHRSGVSL----------YGRDPALSTLRPPGIHGAGP-------- 306
Query: 332 FTPRNRPVESGNHAAILTSTTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKP 391
+LT T + IP Y + G +N+++IR SGA V + +
Sbjct: 307 ---------------LLTQITQTMQIPLTYAEDIIGVKGANIAYIRANSGAVVTIQESLG 351
Query: 392 GATEGVVMVSGTSDQMRAAQSLIH 415
+ V + GTS Q++AAQ LI
Sbjct: 352 SPDDITVEIKGTSSQVQAAQQLIQ 375
>gi|226497902|ref|NP_001151605.1| nucleic acid binding protein [Zea mays]
gi|195648058|gb|ACG43497.1| nucleic acid binding protein [Zea mays]
Length = 524
Score = 107 bits (268), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 108/381 (28%), Positives = 165/381 (43%), Gaps = 52/381 (13%)
Query: 49 EVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMR 108
E VF++L KVG++IG+ G ++ ET A IKI D P ER V+ISA++ +
Sbjct: 120 ESVFRILVPAQKVGAIIGRKGEFIKKMCEETKARIKILDGPPGVPERAVMISAKDEPDAP 179
Query: 109 HSPAQDAVMRVHSRIAEIG--------FEPGQAVVARLLVHSQQIGCLLGRGGHIVSEMR 160
SPA D ++RVH RI + G RLLV S Q G L+G+ G + ++
Sbjct: 180 LSPAMDGLLRVHKRITDSSDGESSQPQRSAGNIGPTRLLVPSSQAGSLIGKQGATIKSIQ 239
Query: 161 RATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKRPGPNN 220
++ + +R+ + P D +V++ G VQ A+ I+S LR+ F + R
Sbjct: 240 DSSKSIVRIV--ENVPPVALNDDRVVEIQGEPLGVQKAVELISSHLRK--FLVDR----- 290
Query: 221 GHSYLPPFPEMPPPPFRPRHNPASPGSYPSPVGPFHSMDRGMGPSQPFDHQAAFSHGMDP 280
S LP F PR P P P GP + R M P
Sbjct: 291 --SVLPLFEAHMKMHGMPREQPVPP---PQHWGPPQTWIRPPNIPPGGPGFGGNPQFMPP 345
Query: 281 MVPPNSDRIPFPYGSERPGHGPTF---DRPPSPRSWTPQGVGGGDPRGFDASSGFTPRNR 337
P P P ++P +G + + PPS S T G P
Sbjct: 346 R--PQDSYYPPPDVEKQPHYGISAYGREAPPSGASAT-----GNQP-------------- 384
Query: 338 PVESGNHAAILTSTTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATEGV 397
P +G+ A ++ IP Y V G +++S+IR+ SGA V + + + +
Sbjct: 385 PSHAGSQVA------HDMHIPLAYADAVIGAAGASISYIRRHSGATVTIQESRGAPGDMT 438
Query: 398 VMVSGTSDQMRAAQSLIHAFI 418
V ++GT+ Q++ AQ LI F+
Sbjct: 439 VEITGTAAQVQTAQQLIQNFM 459
>gi|413955216|gb|AFW87865.1| nucleic acid binding protein [Zea mays]
Length = 441
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 103/384 (26%), Positives = 167/384 (43%), Gaps = 68/384 (17%)
Query: 51 VFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMRHS 110
VF+L+ + KVGS+IG+ G +++ T A ++I + + ERIV++S +E+ + S
Sbjct: 41 VFRLVVPVLKVGSIIGRKGELIKRLVEGTKARVRILEGPVGATERIVLVSGKEDPGLELS 100
Query: 111 PAQDAVMRVHSRIAEIGFEPGQA-----------VVARLLVHSQQIGCLLGRGGHIVSEM 159
PA DA+MRV R+ IG G A ARLLV Q L+G+ G + +
Sbjct: 101 PAMDALMRVFKRV--IGITDGAAEGTQAAATPGVCAARLLVPGAQAINLIGKQGATIKAI 158
Query: 160 RRATGASIRVFPKDQAPR--CGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKRPG 217
+ +TGA+IRV D+ R + + IV++ G+ V AL +++ LR+ +
Sbjct: 159 QESTGATIRVISVDEHERPFYVTDDERIVEIQGDTEKVLKALQAVSNHLRKFLVD----- 213
Query: 218 PNNGHSYLPPFPEMPPPPFRPRHNPASPGSYPSPVGPFHSMDRGMGPSQPFDHQAAFSHG 277
HS LP F + + + S S+PS S PS ++
Sbjct: 214 ----HSVLPLFEKTNTAVSQDHNVGWSDMSHPS----IGSAQVNQPPSVVDEY------- 258
Query: 278 MDPMVPPNSDRI------PFPYGSERPGHGPTFDRPPSPRSWTPQGVGGGDPRGFDASSG 331
++P D + + R G + R P+ + P G+ G P
Sbjct: 259 ---ILPVKRDTLYLERETLLDHNIHRSGVS-LYGRDPALSTLRPPGIHGAGP-------- 306
Query: 332 FTPRNRPVESGNHAAILTSTTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKP 391
+LT T + IP Y + G +N+++IR SGA V + +
Sbjct: 307 ---------------LLTQITQTMQIPLTYAEDIIGVKGANIAYIRANSGAVVTIQESLG 351
Query: 392 GATEGVVMVSGTSDQMRAAQSLIH 415
+ V + GTS Q++AAQ LI
Sbjct: 352 SPDDITVEIKGTSSQVQAAQQLIQ 375
>gi|110740181|dbj|BAF01989.1| HEN4 [Arabidopsis thaliana]
Length = 263
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 89/262 (33%), Positives = 133/262 (50%), Gaps = 31/262 (11%)
Query: 187 QVIGNYHSVQDALFHITSRLRETIFP--MKRPGPNNGHSYLPPFPEMPPPPFRPRH--NP 242
Q+ G + +V++A+FHITSRLR+++F MK +S + F R NP
Sbjct: 1 QITGEFPNVREAIFHITSRLRDSVFSNSMK-------NSLAKSSSALTTERFYDRQSDNP 53
Query: 243 ASPGSYPS---PVGPFHSMDRGMGPSQPFDHQAAFSH----GMDPMVPPNS---DRI-PF 291
S GS+ S P S+ R S ++ ++ G DP + P DR P
Sbjct: 54 LSIGSHQSVSNPATNSSSLHRRSEDSFLSGSHSSVNYSRSVGTDPYIRPEDPFPDRFNPS 113
Query: 292 PYGSERPGHGPTFDRPPSPRSWT--PQGVGG----GDPRGFDASSGFTPRNRP---VESG 342
S G T D + T P + PRG +SG R + SG
Sbjct: 114 AGYSHNFGRRFTMDHSDNSHHLTEAPSRLWASPPPAAPRGLSDASGGLSSARAGHVLGSG 173
Query: 343 NHAAILTSTTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATEGVVMVSG 402
+ +AI+T+TT+E+ +P M+ VYGE NL +RQISGA V++++P G ++ ++++SG
Sbjct: 174 HKSAIVTNTTVEIRVPANAMSFVYGEQGYNLEQLRQISGARVIIHEPPLGTSDRIIVISG 233
Query: 403 TSDQMRAAQSLIHAFILCGVTS 424
T DQ +AAQ+L+HAFIL G TS
Sbjct: 234 TPDQTQAAQNLLHAFILTGETS 255
>gi|414867775|tpg|DAA46332.1| TPA: nucleic acid binding protein [Zea mays]
Length = 448
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 103/377 (27%), Positives = 166/377 (44%), Gaps = 53/377 (14%)
Query: 51 VFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMRHS 110
VF+L+ + KVGS+IG+ G +++ ET A ++I + + ERIV++S +E+ ++
Sbjct: 47 VFRLVVPVLKVGSIIGRKGELIKRLVEETKARVRILEGPVGATERIVLVSGKEDPDLELP 106
Query: 111 PAQDAVMRVHSRIAEI---GFEPGQAV------VARLLVHSQQIGCLLGRGGHIVSEMRR 161
PA DA+MRV R+ I E QA ARLLV Q L+G+ G + ++
Sbjct: 107 PAMDALMRVFKRVTGITDGAAEGTQAAATPDVCAARLLVPGAQAINLIGKQGATIKAIQE 166
Query: 162 ATGASIRVFPKDQAPR--CGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKRPGPN 219
+T A+IRV D+ R + + IV++ G+ V AL +++ LR+ +
Sbjct: 167 STSATIRVISVDEHERPFYVTDDERIVEIQGDTEKVLKALQAVSNHLRKFLV-------- 218
Query: 220 NGHSYLPPFPEMPPPPFRPRH-NPASPGSYPSPVGPFHSMDRGMGPSQPFDHQAAFSHGM 278
HS LP F + + R+ + S S PS S PS D+
Sbjct: 219 -DHSVLPLFEKTNTTVSQDRNGDGWSDMSRPS----IGSAQVNQLPSVLDDY--ILQVKR 271
Query: 279 DPMVPPNSDRIPFPYGSERPGHGPTFDRPPSPRSWTPQGVGGGDPRGFDASSGFTPRNRP 338
DP+ + + R G + R P+ + P V G
Sbjct: 272 DPLYLERESLV--DHNIHRSGVS-LYGRDPALSTLRPSAVHGA----------------- 311
Query: 339 VESGNHAAILTSTTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATEGVV 398
++LT T + IP Y + G +N+++IR SGA V + + + V
Sbjct: 312 ------GSLLTQITQTMQIPLTYAEDIIGVKGANIAYIRANSGAVVTIQESLGSPDDITV 365
Query: 399 MVSGTSDQMRAAQSLIH 415
+ GTS Q++AAQ LI
Sbjct: 366 EIKGTSSQVQAAQQLIQ 382
>gi|219888687|gb|ACL54718.1| unknown [Zea mays]
Length = 448
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 103/377 (27%), Positives = 166/377 (44%), Gaps = 53/377 (14%)
Query: 51 VFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMRHS 110
VF+L+ + KVGS+IG+ G +++ ET A ++I + + ERIV++S +E+ ++
Sbjct: 47 VFRLVVPVLKVGSIIGRKGELIKRLVEETKARVRILEGPVGATERIVLVSGKEDPDLELP 106
Query: 111 PAQDAVMRVHSRIAEI---GFEPGQAV------VARLLVHSQQIGCLLGRGGHIVSEMRR 161
PA DA+MRV R+ I E QA ARLLV Q L+G+ G + ++
Sbjct: 107 PAMDALMRVFKRVTGITDGAAEGTQAAATPDVCAARLLVPGAQAINLIGKQGATIKAIQE 166
Query: 162 ATGASIRVFPKDQAPR--CGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKRPGPN 219
+T A+IRV D+ R + + IV++ G+ V AL +++ LR+ +
Sbjct: 167 STSATIRVISVDEHERPFYVTDDERIVEIQGDTEKVLKALQAVSNHLRKFLV-------- 218
Query: 220 NGHSYLPPFPEMPPPPFRPRH-NPASPGSYPSPVGPFHSMDRGMGPSQPFDHQAAFSHGM 278
HS LP F + + R+ + S S PS S PS D+
Sbjct: 219 -DHSVLPLFEKTNTTVSQDRNGDGWSDMSRPS----IGSAQVNQLPSVLDDY--ILQVKR 271
Query: 279 DPMVPPNSDRIPFPYGSERPGHGPTFDRPPSPRSWTPQGVGGGDPRGFDASSGFTPRNRP 338
DP+ + + R G + R P+ + P V G
Sbjct: 272 DPLYLERESLV--DHNIHRSGVS-LYGRDPALSTLRPSAVHGA----------------- 311
Query: 339 VESGNHAAILTSTTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATEGVV 398
++LT T + IP Y + G +N+++IR SGA V + + + V
Sbjct: 312 ------GSLLTQITQTMQIPLTYAEDIIGVKGANIAYIRANSGAVVTIQESLGSPDDITV 365
Query: 399 MVSGTSDQMRAAQSLIH 415
+ GTS Q++AAQ LI
Sbjct: 366 EIKGTSSQVQAAQQLIQ 382
>gi|356556240|ref|XP_003546434.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine
max]
Length = 442
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 101/381 (26%), Positives = 165/381 (43%), Gaps = 57/381 (14%)
Query: 49 EVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMR 108
+ VF+L+ + KVGS+IG+ G +++ ET + I++ D + +RIV++S +E E
Sbjct: 51 DCVFRLIVPVGKVGSIIGRKGELIKKMCEETRSRIRVLDAPLGTPDRIVLVSGKEEPEAA 110
Query: 109 HSPAQDAVMRVHSRI---AEIGFEPGQAVVA------RLLVHSQQIGCLLGRGGHIVSEM 159
SPA DAV+R+ R+ +E E ++ RLLV S Q L+G+ G ++ +
Sbjct: 111 LSPAMDAVVRIFKRVSGLSETDAENKESAAGLAFCSIRLLVASTQAINLIGKQGSLIKSI 170
Query: 160 RRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKRPGPN 219
+ T AS+RV D+ + + IV++ G V AL + LR+ +
Sbjct: 171 QENTSASVRVLSGDEVQSYATVDERIVEIQGEALKVLKALEAVVGHLRKFLV-------- 222
Query: 220 NGHSYLPPFPEMPPPPFRPRHNPASPGSYPSPVGPFHSMDRGMGPSQPFDHQAAFSHGMD 279
HS LP F + + + S H+ R + F+
Sbjct: 223 -DHSVLPLFEKT----YNASTSQDRQAETWSDKSLLHTTSR----------TSIFAD--- 264
Query: 280 PMVPPNSDRIPFPYGSERPGHGPTFDRPPSPRSWTPQGVGGGDPRGFDAS-SGFTPRNRP 338
PY ++R DR S+ P G D+S SG R
Sbjct: 265 -----------IPYSTKR--DSVLADRESQLDSFLPSSTMS--LYGQDSSLSGV----RS 305
Query: 339 VESGNHAAILTSTTIEVV-IPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATEGV 397
G A + +T I+ + IP Y + G +N+ +IR+ SGA + V + + E V
Sbjct: 306 SALGRVGAPIVTTVIQTMQIPLSYAEDIIGIQGTNIEYIRRTSGAILTVQESRV-PDEIV 364
Query: 398 VMVSGTSDQMRAAQSLIHAFI 418
V + GTS +++ AQ LI I
Sbjct: 365 VEIKGTSSEVQTAQQLIQDVI 385
>gi|357121091|ref|XP_003562255.1| PREDICTED: poly(rC)-binding protein 1-like [Brachypodium
distachyon]
Length = 518
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 103/376 (27%), Positives = 164/376 (43%), Gaps = 44/376 (11%)
Query: 51 VFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMRHS 110
VF++L + KVG++IG+ G ++ E+ A IKI D P ER V+ISA++ + + S
Sbjct: 115 VFRILVPVHKVGAIIGRKGEFIKRMCEESKARIKILDGPPGVPERAVMISAKDEPDEQIS 174
Query: 111 PAQDAVMRVHSRIA-----EIG-FEPGQAVV--ARLLVHSQQIGCLLGRGGHIVSEMRRA 162
PA D ++R+H RIA E G + G + RLLV + Q G L+G+ G + ++ +
Sbjct: 175 PAMDGLLRIHKRIADGSDGEFGQTQRGTGTMGPTRLLVPASQAGSLIGKQGATIKSIQDS 234
Query: 163 TGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKRPGPNNGH 222
+ A +R+ + P D +V++ G SVQ A+ I S LR+ + H
Sbjct: 235 SKAVVRIV--ENVPPVALNDDRVVEIQGEPLSVQKAVELIASHLRKFLV---------DH 283
Query: 223 SYLPPFPEMPPPPFRPRHNPASPGSYPSPVGPFHSMDRGMGPSQPFDHQAAFSHGMDPMV 282
S LP F + PR P P + GP G +
Sbjct: 284 SVLPLFEQQMKMHSMPREQPM-------PAPQQWGPPQPWGPPPNHPPGGPGYAGNPQFM 336
Query: 283 PPNSDRIPFPYGSERPGHGPTFDRPPSPRSWTPQGVGGGDPRGFDASSGFTPRNRPVESG 342
PP +P P P ++ P + G P G AS P +
Sbjct: 337 PPRPQDNYYP-----PPDVPPMEKQPH---YGISAYGREAPSGVSASGNQPPSH------ 382
Query: 343 NHAAILTSTTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATEGVVMVSG 402
+ + T + IP Y V G +++S+IR+ SGA V + + + E V + G
Sbjct: 383 ----VASQVTHNMQIPLSYADAVIGAAGASISYIRRHSGAAVTIQESRGAPGEMNVEIIG 438
Query: 403 TSDQMRAAQSLIHAFI 418
++ Q++ AQ LI F+
Sbjct: 439 SASQVQTAQQLIQNFM 454
>gi|356536806|ref|XP_003536925.1| PREDICTED: poly(rC)-binding protein 1-like [Glycine max]
Length = 561
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 61/188 (32%), Positives = 96/188 (51%), Gaps = 9/188 (4%)
Query: 32 GPGHETVGGRNRMF--YEEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADIL 89
GP + GG + + + E VF++L + KVGS+IG+ G +R +T A IKI D
Sbjct: 142 GPEEDLKGGEVKKWPGWPGENVFRMLVPVQKVGSIIGRKGEFIRKITEDTKARIKILDGP 201
Query: 90 PDSEERIVVISARENSEMRHSPAQDAVMRVHSRIAEIGFEPGQA-------VVARLLVHS 142
P + ER V++SA+E + PA D ++RVH ++ + P + VV RLLV
Sbjct: 202 PGTSERAVMVSAKEEPDCSIPPAVDGLLRVHKQVVNVDPHPADSASGAVRPVVTRLLVAD 261
Query: 143 QQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHI 202
Q G L+G+ G + + ATG +IR+ + P D IV++ G V A+ +
Sbjct: 262 TQAGSLIGKQGSTIKSFQDATGCNIRILGSEHLPVFALRDDSIVEIQGESSGVHKAVELV 321
Query: 203 TSRLRETI 210
LR+ +
Sbjct: 322 AIHLRKFL 329
>gi|224098894|ref|XP_002311309.1| predicted protein [Populus trichocarpa]
gi|222851129|gb|EEE88676.1| predicted protein [Populus trichocarpa]
Length = 447
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 62/182 (34%), Positives = 100/182 (54%), Gaps = 21/182 (11%)
Query: 48 EEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVI-SARENSE 106
E+ V++ LC L K+GS+IGKGG I + + ++ ++I+I++ +P +ER+V I S+ E +
Sbjct: 8 EDTVYRYLCPLRKIGSIIGKGGEIAKQLRADSKSNIRISEAMPGYDERVVTIFSSSEETN 67
Query: 107 MRH------SPAQDAVMRVHSR-IAEI-------------GFEPGQAVVARLLVHSQQIG 146
+ PAQDA+ VH R IAE F Q V R+LV + QIG
Sbjct: 68 LFEDTGEYVCPAQDALFMVHDRVIAEDLNNAAAAEEEEEDRFGEVQQVTVRMLVPTDQIG 127
Query: 147 CLLGRGGHIVSEMRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRL 206
C++G+GG ++ +R T A IR+ + P DE++ + G V+ AL+ + +RL
Sbjct: 128 CVIGKGGQVIQNIRSETRAQIRITKDEHLPPLALSTDELLLIHGEPSVVRKALYQVATRL 187
Query: 207 RE 208
E
Sbjct: 188 HE 189
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/173 (36%), Positives = 91/173 (52%), Gaps = 13/173 (7%)
Query: 76 QNETGASIKIADILPDSEERIVVISARENSEMRHSPAQDAVMRVHSRIAE-IGFEPGQAV 134
+ E+ ASIK+ + + I+ ISA+E E SP +A +R+ R +E E G +V
Sbjct: 275 RQESRASIKVDSSGAEGNDCIIFISAKEFFE-DQSPTMNAALRMQPRCSEKTEKESGDSV 333
Query: 135 VA-RLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYH 193
+ RLLV QIGCL+G+GG I+SEMR T A+IR+ +D P+ DE+VQ+ G+
Sbjct: 334 ITTRLLVGRSQIGCLMGKGGAIISEMRNLTRANIRIISEDNLPKVAGEDDEMVQITGSLE 393
Query: 194 SVQDALFHITSRLRETIFPMKRPGPNNGHSYLPPFPEMPPPPFRPRHNPASPG 246
+AL + RL+ IF R G L FP P P+ P S G
Sbjct: 394 VASNALLQVILRLKANIFG--RDGA------LTTFP--PALPYIPVSLDTSDG 436
>gi|225463940|ref|XP_002269249.1| PREDICTED: poly(rC)-binding protein 3-like [Vitis vinifera]
Length = 442
Score = 104 bits (260), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 74/226 (32%), Positives = 108/226 (47%), Gaps = 30/226 (13%)
Query: 37 TVGGRNRMF--YEEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEE 94
+GG + + + E VF++L KVGS+IG+ G ++ ET A IKI D P + E
Sbjct: 33 AIGGGEKRWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTAE 92
Query: 95 RIVVISARENSEMRHSPAQDAVMRVHSRIAEIGFE-------PGQAVVARLLVHSQQIGC 147
R V++SA+E + PA D +++VH RI + G E PG V RLLV + Q G
Sbjct: 93 RAVMVSAKEEPDSSLPPAMDGLLKVHKRIVD-GLEGDSSHMPPGGKVSTRLLVAASQAGS 151
Query: 148 LLGRGGHIVSEMRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLR 207
L+G+ G V ++ A+ +RV + P D +V+V+G V A+ I S LR
Sbjct: 152 LIGKQGGTVKSIQEASNCIVRVLGAEDLPIFALQDDRVVEVVGEPIGVHKAVELIASHLR 211
Query: 208 ET--------IFPMKRPGPNNGHSYLPPFPEMPPPPFRPRHNPASP 245
+ +F M+ N PP MPP H P P
Sbjct: 212 KFLVDRSVIPLFEMQMQMSN------PPIEHMPP------HQPWGP 245
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 51/96 (53%), Gaps = 8/96 (8%)
Query: 331 GFTPRNRPVESGNHA--------AILTSTTIEVVIPQLYMAHVYGENNSNLSHIRQISGA 382
G + R V G HA +++T T ++ IP Y V G +++S+IR+ SGA
Sbjct: 292 GISAYGREVPMGGHAPSSAQPAPSMITQVTQQMQIPLSYADAVIGTAGASISYIRRASGA 351
Query: 383 NVVVNDPKPGATEGVVMVSGTSDQMRAAQSLIHAFI 418
V + + + E V ++GT+ Q++AAQ LI F+
Sbjct: 352 TVTIQETRGVPGEMTVEINGTASQVQAAQQLIQNFM 387
>gi|218192926|gb|EEC75353.1| hypothetical protein OsI_11789 [Oryza sativa Indica Group]
Length = 478
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 80/233 (34%), Positives = 125/233 (53%), Gaps = 13/233 (5%)
Query: 48 EEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEM 107
+E +LLC VG +IGKGG I++ + E+GA IK+ D ++ I+ +SA+E E
Sbjct: 214 KEFSLRLLCAASNVGGVIGKGGGIIKQIRQESGAFIKV-DSSNTEDDCIITVSAKEFFED 272
Query: 108 RHSPAQDAVMRVHSRIAEIGFEPGQAV---VARLLVHSQQIGCLLGRGGHIVSEMRRATG 164
SP +A + + R +E +P A+ RLLV + +IGCL+G+GG I++E+RR +
Sbjct: 273 PVSPTINAAVHLQPRCSE-KTDPESAIPSYTTRLLVSTSRIGCLIGKGGSIITEIRRTSR 331
Query: 165 ASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKRPGPNNGHSY 224
A+IR+ K+ P+ + +E+VQ+ G+ V+ AL IT+RL+ F +R G +G
Sbjct: 332 ANIRILSKENVPKVAAEDEEMVQISGDLDVVRHALLQITTRLKANFF--EREGALSG--- 386
Query: 225 LPPFPEMPPPPFRPRHNPASPGSYPSPVG---PFHSMDRGMGPSQPFDHQAAF 274
PP P P P G P+G P+ S RG P D A++
Sbjct: 387 FPPVIPYHPLPVGVSEGPKYLGRDTKPLGHDYPYSSGYRGSDDISPIDSYASY 439
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/193 (33%), Positives = 98/193 (50%), Gaps = 39/193 (20%)
Query: 75 FQNETGASIKIADILPDSEERIVVI--SARE-----NSEMRHSPAQDAVMRVHSRIA--- 124
+ +T A I+I + + +ER++ I S+RE ++E + PAQDA+ RVH +++
Sbjct: 1 MRADTQAKIRIGESVSGCDERVITIFSSSRETNTLVDAEDKVCPAQDALFRVHEKLSIDD 60
Query: 125 EIGFEPGQA----VVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAPRCGS 180
+IG E V RLLV S QIGC++G+GGHI+ +R TGA IRV + P C
Sbjct: 61 DIGNEESDEGLAQVTVRLLVPSDQIGCIIGKGGHIIQGIRSDTGAHIRVLSNENLPACAI 120
Query: 181 PHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKRPGPNNGHSYLPPFPEMPPPPFRPRH 240
DE++Q+ G+ V+ AL ++SRL + P R +H
Sbjct: 121 SGDELLQISGDSTVVRKALLQVSSRLHDN-------------------------PSRSQH 155
Query: 241 NPASPGSYPSPVG 253
AS + P PVG
Sbjct: 156 LLASSMTQPYPVG 168
>gi|296087899|emb|CBI35182.3| unnamed protein product [Vitis vinifera]
Length = 511
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 74/226 (32%), Positives = 108/226 (47%), Gaps = 30/226 (13%)
Query: 37 TVGGRNRMF--YEEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEE 94
+GG + + + E VF++L KVGS+IG+ G ++ ET A IKI D P + E
Sbjct: 102 AIGGGEKRWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTAE 161
Query: 95 RIVVISARENSEMRHSPAQDAVMRVHSRIAEIGFE-------PGQAVVARLLVHSQQIGC 147
R V++SA+E + PA D +++VH RI + G E PG V RLLV + Q G
Sbjct: 162 RAVMVSAKEEPDSSLPPAMDGLLKVHKRIVD-GLEGDSSHMPPGGKVSTRLLVAASQAGS 220
Query: 148 LLGRGGHIVSEMRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLR 207
L+G+ G V ++ A+ +RV + P D +V+V+G V A+ I S LR
Sbjct: 221 LIGKQGGTVKSIQEASNCIVRVLGAEDLPIFALQDDRVVEVVGEPIGVHKAVELIASHLR 280
Query: 208 ET--------IFPMKRPGPNNGHSYLPPFPEMPPPPFRPRHNPASP 245
+ +F M+ N PP MPP H P P
Sbjct: 281 KFLVDRSVIPLFEMQMQMSN------PPIEHMPP------HQPWGP 314
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 51/96 (53%), Gaps = 8/96 (8%)
Query: 331 GFTPRNRPVESGNHA--------AILTSTTIEVVIPQLYMAHVYGENNSNLSHIRQISGA 382
G + R V G HA +++T T ++ IP Y V G +++S+IR+ SGA
Sbjct: 361 GISAYGREVPMGGHAPSSAQPAPSMITQVTQQMQIPLSYADAVIGTAGASISYIRRASGA 420
Query: 383 NVVVNDPKPGATEGVVMVSGTSDQMRAAQSLIHAFI 418
V + + + E V ++GT+ Q++AAQ LI F+
Sbjct: 421 TVTIQETRGVPGEMTVEINGTASQVQAAQQLIQNFM 456
>gi|147855522|emb|CAN83854.1| hypothetical protein VITISV_031103 [Vitis vinifera]
Length = 321
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 61/180 (33%), Positives = 104/180 (57%), Gaps = 13/180 (7%)
Query: 42 NRMFYEEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISA 101
R ++V+F+++ ++G +IGK GS ++ + ET A+IKIAD + EER+++IS+
Sbjct: 52 KRRAKNQDVLFRIVVPSRQIGKVIGKEGSRIQKIREETKATIKIADAIARHEERVIIISS 111
Query: 102 RENSEMRHSPAQDAVMRVHSRIAE----------IGFEPGQAVVARLLVHSQQIGCLLGR 151
+ +SE S A++A+++ S I + +G A RLL+ Q GCL+G
Sbjct: 112 K-DSENVISDAENALLQXASLILKEDDSNTDALKVGVGHVVANAIRLLIAGSQAGCLIGM 170
Query: 152 GGHIVSEMRRATGASIRVFPKDQAPRCGSPH--DEIVQVIGNYHSVQDALFHITSRLRET 209
G + ++R ++GA+I + P++Q P C S H D +VQ+ G+ +V AL I +LR T
Sbjct: 171 SGQNIEKLRNSSGATITILPQNQLPLCASAHDSDRMVQISGDVPAVLKALEEIGCQLRTT 230
>gi|326511144|dbj|BAJ87586.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 450
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 104/382 (27%), Positives = 163/382 (42%), Gaps = 63/382 (16%)
Query: 51 VFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMRHS 110
VF+++ + KVGS+IG+ G +++ ET A +++ + + ERIV++SA+E+ +
Sbjct: 52 VFRMVVPVLKVGSIIGRKGELIKRLVEETKARVRVLEGPVGATERIVLVSAKEDPGLELP 111
Query: 111 PAQDAVMRVHSRIAEIGFEPGQA-----------VVARLLVHSQQIGCLLGRGGHIVSEM 159
PA DA++RV R+ G G A ARL+V Q L+G+ G + +
Sbjct: 112 PAMDALIRVFKRVN--GISDGAAEGTQTSAAPGVCAARLVVPGAQAINLIGKQGASIKAI 169
Query: 160 RRATGASIRVFPKDQAPR--CGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKRPG 217
+ TGA+IRV D+ R + + IV++ G V AL +++ LR+ +
Sbjct: 170 QEGTGATIRVISVDERDRPFYVTDDERIVEIQGETEKVLKALQAVSNHLRKFLV------ 223
Query: 218 PNNGHSYLPPFPEMPPPPFRPRHNPASPGSYPSPVGPFHSMDRGMGPSQPFDHQAAFSHG 277
HS LP F + P S DR H + S
Sbjct: 224 ---DHSVLPLFEKTNAPV---------------------SQDRSAETWNDMPHHSIVSTQ 259
Query: 278 MDPMVPPNSDRIPFPYGSERPGHGPTFDRPPSPRSWTPQGVG--GGDPRGFDASSGFTPR 335
++ P D P + H P + GV G DP A S P
Sbjct: 260 VNQQ-PEVRDEYVLPMKRD---HLYLEREPLVEHNIHRSGVSLYGRDP----ALSALRP- 310
Query: 336 NRPVESGNHAA--ILTSTTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGA 393
SG H A +LT T + IP Y + G +N+++IR SGA V + +
Sbjct: 311 -----SGMHGAGPLLTQITQTMQIPLTYAEDIIGVKGANIAYIRANSGAVVTIQESLGSP 365
Query: 394 TEGVVMVSGTSDQMRAAQSLIH 415
+ V + GTS Q+++AQ LI
Sbjct: 366 DDITVEIKGTSSQVQSAQQLIQ 387
>gi|357147442|ref|XP_003574345.1| PREDICTED: LOW QUALITY PROTEIN: poly(rC)-binding protein 1-like
[Brachypodium distachyon]
Length = 447
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 104/381 (27%), Positives = 162/381 (42%), Gaps = 60/381 (15%)
Query: 51 VFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMRHS 110
VF+++ + KVGS+IG+ G +++ ET A +++ D + ER+V++S +E +
Sbjct: 48 VFRMVVPVXKVGSIIGRKGELIKRLVEETKARVRVLDGPVGATERVVLVSGKEEPGLDLP 107
Query: 111 PAQDAVMRVHSR---IAEIGFE-------PGQAVVARLLVHSQQIGCLLGRGGHIVSEMR 160
PA DA++RV R I ++ + P ARLLV Q L+G+ G + ++
Sbjct: 108 PAMDALIRVFKRVNGITDVAADSTTQTAAPPGVCAARLLVPGAQAINLIGKQGASIKAIQ 167
Query: 161 RATGASIRVFPKDQAPR--CGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKRPGP 218
TGA+IRV D+ R + + IV++ G V AL +++ LR+ +
Sbjct: 168 EGTGATIRVISIDERERPFYVTDDERIVEIQGETEKVLKALQAVSNHLRKFLV------- 220
Query: 219 NNGHSYLPPFPEMPPPPFRPRHNPASPGSYPSPVGPFHSMDRGMGPSQPFDHQAAFSHGM 278
HS LP F + P S DR H + S +
Sbjct: 221 --DHSVLPLFEKTNAPV---------------------SQDRSADTWADMPHHSIVSTQV 257
Query: 279 DPMVPPNSDRIPFPYGSERPGHGPTFDRPPSPRSWTPQGVG--GGDPRGFDASSGFTPRN 336
+ P D P E H P + GV G DP A S P
Sbjct: 258 NQQ-PEVRDEYILPMKRE---HLYLEREPLVDHNIHRSGVSLYGRDP----ALSALRP-- 307
Query: 337 RPVESGNHAA--ILTSTTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGAT 394
SG H+ +LT T + IP Y + G +N+++IR SGA V + +
Sbjct: 308 ----SGMHSVGPLLTQITQTMQIPLTYAEDIIGVKGANIAYIRANSGAVVTIQESLGSPD 363
Query: 395 EGVVMVSGTSDQMRAAQSLIH 415
+ V + GTS Q++AAQ LI
Sbjct: 364 DITVEIKGTSSQVQAAQQLIQ 384
>gi|169647179|gb|ACA61608.1| hypothetical protein AP1_E07.1 [Arabidopsis lyrata subsp. petraea]
Length = 532
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 75/251 (29%), Positives = 120/251 (47%), Gaps = 46/251 (18%)
Query: 4 QGNPYPPAAEPFHQRGYAPGYHSRGYSSGPGHETVGGRNRMFYEEEVVFKLLCHLDKVGS 63
QG+P P ++ S+ + SG E + E V F+LLC + G+
Sbjct: 197 QGDPLSPYFFVLAIEVFSKLLQSK-FDSGRLMEFSSSKRPATAAESVHFRLLCPASRTGA 255
Query: 64 LIGKGGSIVRTFQNETGASIKIADILPD-SEERIVVISA-------------REN----- 104
+IGKGGS++R Q+ TG+ I++ D +P SEER+V+I A EN
Sbjct: 256 IIGKGGSVIRHLQSVTGSKIRVIDDIPVPSEERVVLIIAPSGKKKDDSNVFDSENPSSEE 315
Query: 105 ----------------SEMRHSPAQDAVMRVHSRI------AEI---GFEPGQA-VVARL 138
E S AQ A++RV RI A + G + G++ + R+
Sbjct: 316 PKQEKGSECAGTSGGDDEEAPSSAQMALLRVLERIVFGDDAASVDGDGLDKGESESLCRM 375
Query: 139 LVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDA 198
+V Q+ L+ +GG ++ +R +GA +R+ DQ P C P D ++Q+ G + SV+ A
Sbjct: 376 IVRGNQVDFLMSKGGKMIQRIREDSGAIVRISSTDQIPPCAFPGDVVIQITGKFSSVKKA 435
Query: 199 LFHITSRLRET 209
L IT+ L+E+
Sbjct: 436 LLLITNCLQES 446
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/91 (51%), Positives = 54/91 (59%), Gaps = 8/91 (8%)
Query: 2 VVQGNPYPPAAE--PFHQRGYAPGYHSRGYSSGPGH------ETVGGRNRMFYEEEVVFK 53
+Q + PP + PF Q GY P YHS Y H E V NR EEEV F+
Sbjct: 442 CLQESGAPPTWDECPFPQPGYPPDYHSMEYHPQWDHPPNPMPEDVVPFNRPVVEEEVSFR 501
Query: 54 LLCHLDKVGSLIGKGGSIVRTFQNETGASIK 84
LLC DKVGSLIGKGG++VR QNE+GASIK
Sbjct: 502 LLCPADKVGSLIGKGGAVVRALQNESGASIK 532
>gi|147794489|emb|CAN67081.1| hypothetical protein VITISV_007074 [Vitis vinifera]
Length = 534
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 74/210 (35%), Positives = 105/210 (50%), Gaps = 22/210 (10%)
Query: 48 EEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEM 107
E V F++L KVGS+IG+ G ++ ET A IKI D P + ER V++SA+E +
Sbjct: 126 ERVFFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTAERAVMVSAKEEPDS 185
Query: 108 RHSPAQDAVMRVHSRIAEIGFE-------PGQAVVARLLVHSQQIGCLLGRGGHIVSEMR 160
PA D +++VH RI + G E PG V RLLV + Q G L+G+ G V ++
Sbjct: 186 SLPPAMDGLLKVHKRIVD-GLEGDSSHMPPGGKVSTRLLVAASQAGSLIGKQGGTVKSIQ 244
Query: 161 RATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKRPGPNN 220
A+ +RV + P D +V+V+G V A+ I S LR+ F + R
Sbjct: 245 EASNCIVRVLGAEDLPIFALQDDRVVEVVGEPIGVHKAVELIASHLRK--FLVDR----- 297
Query: 221 GHSYLPPFP---EMPPPPF--RPRHNPASP 245
S +P F +M PP RP H P P
Sbjct: 298 --SVIPLFEMQMQMSNPPIEHRPPHQPWGP 325
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 51/97 (52%), Gaps = 8/97 (8%)
Query: 331 GFTPRNRPVESGNHA--------AILTSTTIEVVIPQLYMAHVYGENNSNLSHIRQISGA 382
G + R V G HA +++T T ++ IP Y V G +++S+IR+ SGA
Sbjct: 372 GISAYGREVPMGGHAPSSAQPAPSMITQVTQQMQIPLSYADAVIGTAGASISYIRRASGA 431
Query: 383 NVVVNDPKPGATEGVVMVSGTSDQMRAAQSLIHAFIL 419
V + + + E V ++GT+ Q++AAQ LI A L
Sbjct: 432 TVTIQETRGVPGEMTVEINGTASQVQAAQQLIQALFL 468
>gi|297803502|ref|XP_002869635.1| hypothetical protein ARALYDRAFT_492216 [Arabidopsis lyrata subsp.
lyrata]
gi|297315471|gb|EFH45894.1| hypothetical protein ARALYDRAFT_492216 [Arabidopsis lyrata subsp.
lyrata]
Length = 495
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 97/382 (25%), Positives = 164/382 (42%), Gaps = 59/382 (15%)
Query: 49 EVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMR 108
+ VF+++ + KVG++IG+ G ++ ET A IK+ D ++ +RIV+IS +E E
Sbjct: 73 DCVFRMIVPVSKVGAIIGRKGDFIKKMCEETRARIKVLDGPVNTPDRIVLISGKEEPEAY 132
Query: 109 HSPAQDAVMRVHSRIA--------EIGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSEMR 160
SPA DAV+RV R++ ++ RLLV S Q L+G+ G ++ +
Sbjct: 133 MSPAMDAVLRVFRRVSGLPDNDDDDVQNAGSAFCSVRLLVASTQAINLIGKQGSLIKSIV 192
Query: 161 RATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKRPGPNN 220
+GAS+R+ +++ P + + IV + G + AL I LR+ +
Sbjct: 193 ENSGASVRILSEEETPFYAAQDERIVDLQGEALKILKALEAIVGHLRKFLV--------- 243
Query: 221 GHSYLPPFPEMPPPPFRPRHNPASPGSYPSPVGPFHSMDRGMGPSQPFDHQAAFSHGMDP 280
H+ +P F + Y + V +P + H +
Sbjct: 244 DHTVVPLFEKQ----------------YLARVSQTRQ-------EEPLAESKSSLHTI-- 278
Query: 281 MVPPNSDRIPFPYGSERPGHGPTF-DRPPSPRSWT-PQGVG--GGDPRGFDASSGFTPRN 336
S + P S P F DR S P GV DP + R+
Sbjct: 279 -----SSNVIEPDFSLLARRDPLFLDRDARVESRVQPTGVSIYSQDPV-------LSARH 326
Query: 337 RPVESGNHAAILTSTTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATEG 396
P + +A +T + + IP Y + G +N+++IR+ SGA + + + P +
Sbjct: 327 SPGLARVSSAFVTQVSQTMQIPFSYAEDIIGVEGANIAYIRRRSGATITIKE-SPHPDQI 385
Query: 397 VVMVSGTSDQMRAAQSLIHAFI 418
V + GTS Q++ A+ LI FI
Sbjct: 386 TVEIKGTSSQVQTAEQLIQEFI 407
>gi|222613081|gb|EEE51213.1| hypothetical protein OsJ_32035 [Oryza sativa Japonica Group]
Length = 861
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 106/376 (28%), Positives = 174/376 (46%), Gaps = 74/376 (19%)
Query: 67 KGG--SIVRTFQNETGASIKIADILPD-SEERIVVISARENSEMRHSPAQDAVMRVHSRI 123
+GG S+ + +TGA ++ ++ + SEER++V+S++E + SP +A++ +HS+
Sbjct: 517 RGGIFSVCVNSEVQTGACGQVKEVGKNASEERLIVVSSQEIPDDPVSPTIEALILLHSKA 576
Query: 124 AEIGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAPRCGSPHD 183
+ + + RL+V S ++GC+LG GG +++EMRR TGA IRV+ K P+ S +
Sbjct: 577 STLA--ENHQLTTRLVVPSNKVGCILGEGGKVITEMRRRTGAEIRVYSKADKPKYLSFDE 634
Query: 184 EIVQVIGNYHSVQDALFHITSRLRETIFPMKRPGPNNGHSYLPPFPEMPPPPFRPRHNPA 243
E+VQ ++F T L+ R GP + P+ P F R P
Sbjct: 635 ELVQA---------SVFSFTLGLQNL-----RTGPAH-----DPYTVYPVEYFSKREYP- 674
Query: 244 SPGSYPSPVGPFHSMDRGMGPSQPFDHQ--AAFSHGMDPM--------VPPN--SDRIPF 291
S S V P S +R ++ + + ++ S G D M VP + S+R+
Sbjct: 675 ---SGSSKVAPSASYERYAATTRLPNGELPSSISPGADYMSCRSYLDQVPTDRYSNRVTL 731
Query: 292 PYGSERPGH------GPTFDRPPSPRSWT---PQGVGGGDPRGFDASSGFTPRNRPVESG 342
G R G+ G T + +T Q G D R +G+ P S
Sbjct: 732 QLGLSRAGNSNVQQLGITRAGNSNAYDYTEAAEQIHGREDYRRLSGLTGY-----PGGSS 786
Query: 343 NHAAILTSTTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATEGVVMVSG 402
N ++V N +LS + ISGA V +++ PG++E +V + G
Sbjct: 787 NCG-------FQIV-------------NWSLSLVLVISGARVKLHEAHPGSSESIVEIQG 826
Query: 403 TSDQMRAAQSLIHAFI 418
DQ++AAQSL+ FI
Sbjct: 827 IPDQVKAAQSLLQGFI 842
>gi|226528431|ref|NP_001149906.1| nucleic acid binding protein [Zea mays]
gi|195635381|gb|ACG37159.1| nucleic acid binding protein [Zea mays]
Length = 448
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 100/379 (26%), Positives = 163/379 (43%), Gaps = 57/379 (15%)
Query: 51 VFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMRHS 110
VF+L+ + KVGS+IG+ G +++ ET A ++I + + ERIV++S +E+ ++
Sbjct: 47 VFRLVVPVLKVGSIIGRKGELIKRLVEETKARVRILEGPVGATERIVLVSGKEDPDLELP 106
Query: 111 PAQDAVMRVHSRIAEIGFEPG-----------QAVVARLLVHSQQIGCLLGRGGHIVSEM 159
PA DA+MRV + G G ARLLV Q L+G+ G + +
Sbjct: 107 PAMDALMRVFKXVT--GITDGAAEXTQAAATPDVCAARLLVPGAQAINLIGKQGATIKAI 164
Query: 160 RRATGASIRVFPKDQAPR--CGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKRPG 217
+ +T A+IRV D+ R + + IV++ G+ V AL +++ LR+ +
Sbjct: 165 QESTSATIRVISVDEHERPFYVTDDERIVEIQGDTEKVLKALQAVSNHLRKFLV------ 218
Query: 218 PNNGHSYLPPFPEMPPPPFRPRH-NPASPGSYPSPVGPFHSMDRGMGPSQPFDHQAAFSH 276
HS LP F + + R+ + S S PS S PS D+
Sbjct: 219 ---DHSVLPLFEKTNTTVSQDRNGDGWSDMSRPS----IGSAQVNQLPSVLDDYILQVKR 271
Query: 277 GMDPMVPPNSDRIPFPYGSERPGHGPTFDRPPSPRSWTPQGVGGGDPRGFDASSGFTPRN 336
DP+ + + R G + R P+ + P V G
Sbjct: 272 --DPLYLERESLV--DHNIHRSGVS-LYGRDPALSTLRPSAVHGA--------------- 311
Query: 337 RPVESGNHAAILTSTTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATEG 396
++LT T + IP Y + G +N+++IR SGA V + + +
Sbjct: 312 --------GSLLTQITQTMQIPLTYAEDIIGVKGANIAYIRANSGAVVTIQESLGSPDDI 363
Query: 397 VVMVSGTSDQMRAAQSLIH 415
V + GTS Q++AAQ LI
Sbjct: 364 TVEIKGTSSQVQAAQQLIQ 382
>gi|356572245|ref|XP_003554280.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine
max]
Length = 528
Score = 101 bits (251), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 58/170 (34%), Positives = 89/170 (52%), Gaps = 7/170 (4%)
Query: 49 EVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMR 108
E VF++L + KVGS+IG+ G ++ ET A IKI D P ER V++SA+E +
Sbjct: 124 ENVFRMLVPVQKVGSIIGRKGEFIKKITEETKARIKILDGPPGISERAVMVSAKEEPDCP 183
Query: 109 HSPAQDAVMRVHSRI-------AEIGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRR 161
PA D ++RVH ++ A+ G++VV RLLV Q G L+G+ G + ++
Sbjct: 184 IPPAVDGLLRVHKQVINVDRDLADSALAAGRSVVTRLLVADTQAGSLIGKQGSTIKSIQD 243
Query: 162 ATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIF 211
+G +IRV + P D IV++ G V A+ I LR+ +
Sbjct: 244 GSGCTIRVLGSENLPIFALRDDSIVEIQGESAGVHKAVELIAVHLRKFLV 293
>gi|356504987|ref|XP_003521274.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine
max]
Length = 529
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/204 (31%), Positives = 99/204 (48%), Gaps = 18/204 (8%)
Query: 49 EVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMR 108
E VF++L + KVGS+IG+ G ++ ET A IKI D P ER V++SA+E +
Sbjct: 125 ENVFRMLVPVQKVGSIIGRKGEFIKKITEETKARIKILDGPPGISERAVMVSAKEEPDRP 184
Query: 109 HSPAQDAVMRVHSRIAEI-------GFEPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRR 161
PA D ++RVH ++ + G++VV RLLV Q G L+G+ G + ++
Sbjct: 185 IPPAIDGLLRVHKQVINVDRDLVDSALAAGRSVVTRLLVADTQAGSLIGKQGSTIKSIQD 244
Query: 162 ATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFP--------- 212
+G +IRV + P D IV++ G V A+ I LR+ +
Sbjct: 245 GSGCTIRVLGSENLPVFALRDDSIVEIQGESAGVHKAVELIAVHLRKFLVDRSIVGVFET 304
Query: 213 -MKRPGPNNGHSYLPPFPEMPPPP 235
M+RP + +PP PPP
Sbjct: 305 QMQRPDVRVNQN-VPPHQNWGPPP 327
>gi|30684386|ref|NP_849406.1| KH domain-containing protein [Arabidopsis thaliana]
gi|24762211|gb|AAN64172.1| putative KH domain protein [Arabidopsis thaliana]
gi|332658635|gb|AEE84035.1| KH domain-containing protein [Arabidopsis thaliana]
Length = 532
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/184 (33%), Positives = 103/184 (55%), Gaps = 16/184 (8%)
Query: 30 SSGPGHETVGGRNRMFYEEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADIL 89
SS P GG +R EE+VFK+LC L + +IGKGGS ++ + +G+ I++ D
Sbjct: 295 SSLPVTHGFGGSSR---SEELVFKVLCPLCNIMRVIGKGGSTIKRIREASGSCIEVNDSR 351
Query: 90 PDS--EERIVVISARENSEMRHSPAQDAVMRVHSRIAEIGFEPGQAVVARLLVHSQQIGC 147
+E +++++A E+ + S A +AV+ + I + E + V +LLV S+ IGC
Sbjct: 352 TKCGDDECVIIVTATESPDDMKSMAVEAVLLLQEYIND---EDAENVKMQLLVSSKVIGC 408
Query: 148 LLGRGGHIVSEMRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLR 207
++G+ G +++E+R+ T A+I + D++V+V G SV+DAL I RLR
Sbjct: 409 VIGKSGSVINEIRKRTNANICISK--------GKKDDLVEVSGEVSSVRDALIQIVLRLR 460
Query: 208 ETIF 211
E +
Sbjct: 461 EDVL 464
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 94/185 (50%), Gaps = 22/185 (11%)
Query: 42 NRMFYEEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVI-- 99
+++ +E VV+++LC +D VG +IGK G ++ ++ T A IK+ D L +R++ I
Sbjct: 28 DKINRDELVVYRILCPIDVVGGVIGKSGKVINAIRHNTKAKIKVFDQLHGCSQRVITIYC 87
Query: 100 SARENSE------MRHSP---AQDAVMRVHSRI--------AEIGFEPGQAVVARLLVHS 142
S +E E + P AQDA+++V+ I + + RLLV
Sbjct: 88 SVKEKQEEIGFTKSENEPLCCAQDALLKVYDAIVASDEENNTKTNVDRDDNKECRLLVPF 147
Query: 143 QQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAP---RCGSPHDEIVQVIGNYHSVQDAL 199
Q L+G+ G + +RR T AS++V KD + C +D +V + G SV+ AL
Sbjct: 148 SQSSSLIGKAGENIKRIRRRTRASVKVVSKDVSDPSHVCAMEYDNVVVISGEPESVKQAL 207
Query: 200 FHITS 204
F +++
Sbjct: 208 FAVSA 212
>gi|15236863|ref|NP_193572.1| KH domain-containing protein [Arabidopsis thaliana]
gi|15214341|sp|P58223.1|Y4837_ARATH RecName: Full=KH domain-containing protein At4g18375
gi|22136632|gb|AAM91635.1| unknown protein [Arabidopsis thaliana]
gi|332658636|gb|AEE84036.1| KH domain-containing protein [Arabidopsis thaliana]
Length = 606
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/184 (33%), Positives = 103/184 (55%), Gaps = 16/184 (8%)
Query: 30 SSGPGHETVGGRNRMFYEEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADIL 89
SS P GG +R EE+VFK+LC L + +IGKGGS ++ + +G+ I++ D
Sbjct: 295 SSLPVTHGFGGSSR---SEELVFKVLCPLCNIMRVIGKGGSTIKRIREASGSCIEVNDSR 351
Query: 90 PDS--EERIVVISARENSEMRHSPAQDAVMRVHSRIAEIGFEPGQAVVARLLVHSQQIGC 147
+E +++++A E+ + S A +AV+ + I + E + V +LLV S+ IGC
Sbjct: 352 TKCGDDECVIIVTATESPDDMKSMAVEAVLLLQEYIND---EDAENVKMQLLVSSKVIGC 408
Query: 148 LLGRGGHIVSEMRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLR 207
++G+ G +++E+R+ T A+I + D++V+V G SV+DAL I RLR
Sbjct: 409 VIGKSGSVINEIRKRTNANICISK--------GKKDDLVEVSGEVSSVRDALIQIVLRLR 460
Query: 208 ETIF 211
E +
Sbjct: 461 EDVL 464
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 94/185 (50%), Gaps = 22/185 (11%)
Query: 42 NRMFYEEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVI-- 99
+++ +E VV+++LC +D VG +IGK G ++ ++ T A IK+ D L +R++ I
Sbjct: 28 DKINRDELVVYRILCPIDVVGGVIGKSGKVINAIRHNTKAKIKVFDQLHGCSQRVITIYC 87
Query: 100 SARENSE------MRHSP---AQDAVMRVHSRI--------AEIGFEPGQAVVARLLVHS 142
S +E E + P AQDA+++V+ I + + RLLV
Sbjct: 88 SVKEKQEEIGFTKSENEPLCCAQDALLKVYDAIVASDEENNTKTNVDRDDNKECRLLVPF 147
Query: 143 QQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAP---RCGSPHDEIVQVIGNYHSVQDAL 199
Q L+G+ G + +RR T AS++V KD + C +D +V + G SV+ AL
Sbjct: 148 SQSSSLIGKAGENIKRIRRRTRASVKVVSKDVSDPSHVCAMEYDNVVVISGEPESVKQAL 207
Query: 200 FHITS 204
F +++
Sbjct: 208 FAVSA 212
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 48/71 (67%)
Query: 349 TSTTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATEGVVMVSGTSDQMR 408
+S+ +E++IP M+ V G+ NL +IR+ISGA + ++ K + + ++SGT +QMR
Sbjct: 534 SSSALEILIPAHAMSKVMGKGGGNLENIRRISGAMIEISASKTSHGDHIALLSGTLEQMR 593
Query: 409 AAQSLIHAFIL 419
A++L+ AF++
Sbjct: 594 CAENLVQAFVM 604
>gi|297735477|emb|CBI17917.3| unnamed protein product [Vitis vinifera]
Length = 364
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 103/359 (28%), Positives = 148/359 (41%), Gaps = 71/359 (19%)
Query: 77 NETGASIKIADILPDSEERIVVISARENSEMRHSPAQDAVMRVHSRIAEI------GFEP 130
ET A I++ D + +RIV+IS RE E SPA DAV+RV R+ + G
Sbjct: 3 EETRARIRVLDGAVGTSDRIVLISGREEPEAPLSPAMDAVIRVFKRVTGLSESEGDGKAY 62
Query: 131 GQAVVA----RLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAPRCGSPHDEIV 186
G A VA RLLV S Q L+G+ G ++ ++ +TGAS+RV D+ P + + IV
Sbjct: 63 GAAGVAFCSIRLLVASTQAINLIGKQGSLIKSIQESTGASVRVLSGDEVPFYAAADERIV 122
Query: 187 QVIGNYHSVQDALFHITSRLRETIFPMKRPGPNNGHSYLPPFPEMPPPPF---RPRHNPA 243
++ G VQ AL + LR+ + HS LP F R A
Sbjct: 123 ELQGEALKVQKALEAVVGHLRKFLVD---------HSVLPLFERTYNATISQDRQSDTWA 173
Query: 244 SP----GSYPSPVGPFHSMDRGMGPSQPFDHQAAFSHGMDPMVPPNSDRIPFPYGSERPG 299
G+ + +G +S+ S D + H PM YG E
Sbjct: 174 DKSLLHGTSQTGMGSDYSLP-AKRESLYLDRETQMEHSGLPM-----------YGQE--- 218
Query: 300 HGPTFDRPPSPRSWTPQGVGGGDPRGFDASSGFTPRNRPVESGNHAAILTSTTIEVVIPQ 359
HG + R SSG P I+T + IP
Sbjct: 219 HGLSGIR----------------------SSGLGRAGAP--------IVTQIAQTMQIPL 248
Query: 360 LYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATEGVVMVSGTSDQMRAAQSLIHAFI 418
Y + G +N+++IR+ SGA + V + + E V + GTS Q++ AQ LI FI
Sbjct: 249 SYAEDIIGIGGANIAYIRRTSGAILTVQESRGLPDEITVEIKGTSSQVQTAQQLIQEFI 307
>gi|116784616|gb|ABK23409.1| unknown [Picea sitchensis]
Length = 407
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/172 (33%), Positives = 95/172 (55%), Gaps = 12/172 (6%)
Query: 49 EVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMR 108
++VF+++ +K+G +IGK GS + + +TGA IKIAD + E+R+++IS++ E
Sbjct: 92 DIVFRIVVASNKIGKVIGKQGSKINQLREDTGARIKIADPVTPLEDRVIIISSKGEEEEE 151
Query: 109 HSPAQDAVMRVHSRIAEIGFEPGQAV----------VARLLVHSQQIGCLLGRGGHIVSE 158
S A+ A++++ + I E E + RLL+ Q G L+G G + E
Sbjct: 152 TSAAEQALIQIATVILEESGESSATAKVGTRHVGPNMMRLLIAGSQAGSLIGASGKTIKE 211
Query: 159 MRRATGASIRVFPKDQAPRCGSPH--DEIVQVIGNYHSVQDALFHITSRLRE 208
+R +GA+I++ P++ +P C S D +VQ+ G V AL HI LRE
Sbjct: 212 IRNDSGATIKILPQNLSPICASASETDRLVQISGEVSQVLKALDHIGVTLRE 263
Score = 42.7 bits (99), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Query: 348 LTSTTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATEGVVMVSGTSDQM 407
L T+E+ IP V G+ N+S IR +SGA V V K GAT + GT+ Q+
Sbjct: 326 LPKVTVEMKIPSSVAGGVIGKRGDNISQIRSLSGAIVKVIGEKDGATR-TIFFEGTAHQV 384
Query: 408 RAAQSLIHAFI 418
AQ+L++ I
Sbjct: 385 ATAQNLVNNHI 395
>gi|359479585|ref|XP_002275698.2| PREDICTED: uncharacterized protein LOC100266515 [Vitis vinifera]
Length = 858
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 73/239 (30%), Positives = 116/239 (48%), Gaps = 18/239 (7%)
Query: 25 HSRGYSSGPGHETVGGRNRMFYEEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIK 84
+G + G G GG + E VF++L + KVG +IG+ G ++ ET A IK
Sbjct: 19 EKQGLNDGSG----GGEKWPGWPGENVFRMLIPVQKVGYIIGRKGEHIKKLSEETKARIK 74
Query: 85 IADILPDSEERIVVISARENSEMRHSPAQDAVMRVHSRIAEIGFE----PGQAVVARLLV 140
I D P + ER V++SA+E + +PA D ++RVH I ++ + G V RLLV
Sbjct: 75 ILDGPPGTSERAVMVSAKEEPDAPIAPAIDGLLRVHKCIMDVESDVPSAAGVMVSTRLLV 134
Query: 141 HSQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALF 200
+ Q G L+G+ G + ++ A+ +RV ++ P +D +V++ G SV A+
Sbjct: 135 VAAQAGSLIGKQGATIKSIQEASNCIVRVLGEN-LPLFALQNDTVVEIQGEPASVHKAVE 193
Query: 201 HITSRLRE--------TIFPMKRPGPNN-GHSYLPPFPEMPPPPFRPRHNPASPGSYPS 250
I S LR+ +F M+ PN G+ +PP P P + PG P+
Sbjct: 194 LIASNLRKFLVDRSVIKVFEMEMQKPNTQGNENMPPQQSWDPSQVFPINTGGEPGFVPN 252
Score = 43.1 bits (100), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 46/93 (49%), Gaps = 5/93 (5%)
Query: 332 FTPRNRPVESGNHAAILTSTTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKP 391
T R++ E G+ T + +P Y V G + N+S++R+ SGA + + + K
Sbjct: 719 LTWRSKKAECGSKV-----ITQYMQVPLSYADAVIGASGVNISYVRRTSGATIAIEETKG 773
Query: 392 GATEGVVMVSGTSDQMRAAQSLIHAFILCGVTS 424
E V ++G+ Q++ AQ LI F+ +S
Sbjct: 774 VPGEMTVEINGSVSQVQTAQQLIQNFMAEAASS 806
>gi|334187557|ref|NP_196518.3| RNA-binding KH domain-containing protein [Arabidopsis thaliana]
gi|332004027|gb|AED91410.1| RNA-binding KH domain-containing protein [Arabidopsis thaliana]
Length = 612
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/194 (33%), Positives = 106/194 (54%), Gaps = 16/194 (8%)
Query: 49 EVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMR 108
+V K+LC + S+V ++ T ASI + D PD +ER+V I+A E ++
Sbjct: 311 QVDLKILCS--------NESASVVIKTRSVTDASISVGDRHPDCDERLVTITAFEKTKDI 362
Query: 109 HSPAQDAVMRVHSRIAEIG----FEPG--QAVVARLLVHSQQIGCLLGRGGHIVSEMRRA 162
S +Q A++ V S + E + G ++ ARL+V S QI CLLG G I + +++
Sbjct: 363 TSESQRALVLVFSNMYENATAKVLDSGLTSSITARLVVRSNQINCLLGEEGRIKTTIQQR 422
Query: 163 TGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMK-RPGPNNG 221
TGA I V +Q P+C S ++++VQ+ G + +V++A+ +TS LRE + + G
Sbjct: 423 TGAFITVLNVEQNPKCVSENNQVVQISGEFPNVREAINQVTSMLREDLINQSFQRGSQYA 482
Query: 222 HSYLP-PFPEMPPP 234
+Y PFPE+ P
Sbjct: 483 VNYSEDPFPELFSP 496
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 84/185 (45%), Gaps = 27/185 (14%)
Query: 48 EEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADI-LPDSEERIVVISARENSE 106
E V F++LC++ + G +IGK G +V+ T +SI + L DS RI+ I S
Sbjct: 28 EYVTFRILCNVSQAGHVIGKHGGMVKKLHKSTESSIWVEKTPLDDSPYRIIKIFGHVGSV 87
Query: 107 MR-----------------------HSPAQDAVMRVHSRIAEIGFEPGQAVVARLLVHSQ 143
R S AQ A++RV + G V LL+
Sbjct: 88 SRVKLGVIVNNVSNREKKEQEQEVEVSRAQYALIRVFEAL-NFGDCTSSTVSCNLLMEGS 146
Query: 144 QIGCLLGRGGHIVSEMRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHS-VQDALFHI 202
+ ++G+ G ++ + TG ++++ D + C +P D ++++ GN S V AL I
Sbjct: 147 HVVTVIGKNGELMQRILEETGCNVQLRSHDLSI-CTNPGDVVLKIEGNRLSAVMKALVSI 205
Query: 203 TSRLR 207
+SRL+
Sbjct: 206 SSRLQ 210
>gi|7671433|emb|CAB89374.1| putative protein [Arabidopsis thaliana]
Length = 567
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 65/194 (33%), Positives = 106/194 (54%), Gaps = 16/194 (8%)
Query: 49 EVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMR 108
+V K+LC + S+V ++ T ASI + D PD +ER+V I+A E ++
Sbjct: 315 QVDLKILCS--------NESASVVIKTRSVTDASISVGDRHPDCDERLVTITAFEKTKDI 366
Query: 109 HSPAQDAVMRVHSRIAEIG----FEPG--QAVVARLLVHSQQIGCLLGRGGHIVSEMRRA 162
S +Q A++ V S + E + G ++ ARL+V S QI CLLG G I + +++
Sbjct: 367 TSESQRALVLVFSNMYENATAKVLDSGLTSSITARLVVRSNQINCLLGEEGRIKTTIQQR 426
Query: 163 TGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMK-RPGPNNG 221
TGA I V +Q P+C S ++++VQ+ G + +V++A+ +TS LRE + + G
Sbjct: 427 TGAFITVLNVEQNPKCVSENNQVVQISGEFPNVREAINQVTSMLREDLINQSFQRGSQYA 486
Query: 222 HSYLP-PFPEMPPP 234
+Y PFPE+ P
Sbjct: 487 VNYSEDPFPELFSP 500
Score = 44.3 bits (103), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 80/192 (41%), Gaps = 37/192 (19%)
Query: 48 EEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADI-LPDSEERIVVISARENSE 106
E V F++LC++ + G +IGK G +V+ T +SI + L DS RI+ I S
Sbjct: 28 EYVTFRILCNVSQAGHVIGKHGGMVKKLHKSTESSIWVEKTPLDDSPYRIIKIFGHVGSV 87
Query: 107 MR-----------------------HSPAQDAVMRVHSRIAEIGFEPGQAVVARLLVHSQ 143
R S AQ A++RV + G V LL+
Sbjct: 88 SRVKLGVIVNNVSNREKKEQEQEVEVSRAQYALIRVFEAL-NFGDCTSSTVSCNLLMEGS 146
Query: 144 QIGCLLGRGGHIVSEMRRATGASIRVFPKDQAPRCGSPHDEIV-------QVIGNYHS-V 195
+ ++G+ G ++ + TG + + +A GS I+ ++ GN S V
Sbjct: 147 HVVTVIGKNGELMQRILEETGCNSLI----KALLFGSSSCRIIHGTYARDKIEGNRLSAV 202
Query: 196 QDALFHITSRLR 207
AL I+SRL+
Sbjct: 203 MKALVSISSRLQ 214
>gi|293331673|ref|NP_001170496.1| uncharacterized protein LOC100384498 [Zea mays]
gi|238005660|gb|ACR33865.1| unknown [Zea mays]
Length = 239
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 84/292 (28%), Positives = 127/292 (43%), Gaps = 65/292 (22%)
Query: 137 RLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQ 196
RLLV ++ IGCL+GRGG IV++MR+ T A+I + D+ PR S DE+V+V G ++
Sbjct: 4 RLLVPNKVIGCLIGRGGSIVNDMRKKTKANILISKGDK-PRRASSSDELVEVSGEADKLR 62
Query: 197 DALFHITSRLRETIFPMKRPGPN---NGHSYLPPF-----PEMPPPPFRPRHNPASPGSY 248
DAL I RLRE + N +G + +P P P + +P Y
Sbjct: 63 DALVQIILRLREAVLKESVESQNSDRDGQLTVAASDSLYGSSLPLPALLPHNQQIAPLGY 122
Query: 249 PSPVGPFHSMDRGMGPSQPFDHQAAFSHGMDPMVPPNSDRIPFPYGSERPGHGPTFDRPP 308
DR P + + + P S YG
Sbjct: 123 ----------DRRGEPERALE-----------VFPRTS-----SYGY------------- 143
Query: 309 SPRSWTPQGVGGGDPRGFDASSGFTPRNRPVESGNHAAILTSTTIEVVIPQLYMAHVYGE 368
S T G GG A PR +E+ +P ++ V G+
Sbjct: 144 SSMQVTDDGYGGLPSYASKAYEEHVPR-----------------LEMTVPASGISKVMGK 186
Query: 369 NNSNLSHIRQISGANVVVNDPKPGATEGVVMVSGTSDQMRAAQSLIHAFILC 420
+ +NL +IR+ISGA++ + +PK E + +SGTS+Q +A++LI AFI+
Sbjct: 187 HGTNLDNIRKISGAHIEIIEPKSSRHEHIAYISGTSEQRHSAENLIKAFIMS 238
>gi|302770987|ref|XP_002968912.1| hypothetical protein SELMODRAFT_409630 [Selaginella moellendorffii]
gi|300163417|gb|EFJ30028.1| hypothetical protein SELMODRAFT_409630 [Selaginella moellendorffii]
Length = 393
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 100/371 (26%), Positives = 155/371 (41%), Gaps = 71/371 (19%)
Query: 51 VFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMRHS 110
VF+L+ L KVG++IG+ G V+ ET + IKI D +P + ERIV++SA+E+ E S
Sbjct: 50 VFRLIVPLHKVGAIIGRKGEFVKRMCEETRSRIKILDGVPGTLERIVLVSAKEDPEATIS 109
Query: 111 PAQDAVMRVHSRIAEIG----------FEPGQAVVARLLVHSQQIGCLLGRGGHIVSEMR 160
PA D ++RVH R+ E P V +RLLV + Q G L+GR
Sbjct: 110 PAMDGLLRVHRRVTEGSSGDGEPVEHIILPSGLVQSRLLVTATQAGSLIGR--------- 160
Query: 161 RATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKRPGPNN 220
+++ P C D +V+V G VQ A+ + S LR+ F + R
Sbjct: 161 -----------QEELPLCALADDRMVEVQGEILKVQKAMELVVSHLRK--FLVDR----- 202
Query: 221 GHSYLPPFPEMPPPPFRPRHNPASPGSYPSPVG-PFHSMDRGMGPSQPFDHQAAFSHGMD 279
S L F N + GS +G H+ + S Q A +
Sbjct: 203 --SVLQLF----------EFNVSFAGS--RSIGYKVHNGELQRAMSSQVQGQQAAAIATS 248
Query: 280 PMVPPNSDRIPFPYGSERPGHGPTFDRPPSPRSWTPQGVGGGDPRGFDASSGFTPRNRPV 339
P + P+ + S V GGDP D +S TP
Sbjct: 249 WATPTVAATTPYSSTDYYADQAQSQHYAVS--------VYGGDPGRVDVTS-TTP----- 294
Query: 340 ESGNHAAILTSTTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATEGVVM 399
AA + + ++ +P LY + G +N++++R+ SGA + + + E +
Sbjct: 295 -----AAPAETVSQQLQVPLLYADAIIGTAGANINYMRRTSGATISIQETPNAPGEMTIE 349
Query: 400 VSGTSDQMRAA 410
V G S Q++ A
Sbjct: 350 VHGQSTQVQTA 360
>gi|147807331|emb|CAN73002.1| hypothetical protein VITISV_044056 [Vitis vinifera]
Length = 1121
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 73/237 (30%), Positives = 117/237 (49%), Gaps = 18/237 (7%)
Query: 27 RGYSSGPGHETVGGRNRMFYEEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIA 86
+G ++G G GG + E VF++L + KVG +IG+ G ++ ET A IKI
Sbjct: 21 QGLNNGSG----GGEKWPGWPGENVFRMLIPVQKVGYIIGRKGEHIKKLSEETKARIKIL 76
Query: 87 DILPDSEERIVVISARENSEMRHSPAQDAVMRVHSRIAEIGFE----PGQAVVARLLVHS 142
D P + ER V++SA+E + +PA D ++RVH I ++ + G V RLLV +
Sbjct: 77 DGPPGTSERAVMVSAKEEPDAPIAPAIDGLLRVHKCIMDVESDVPSAAGVMVSTRLLVVA 136
Query: 143 QQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHI 202
Q G L+G+ G + ++ A+ +RV ++ P +D +V++ G SV A+ I
Sbjct: 137 AQAGSLIGKQGATIKSIQEASNCIVRVLGEN-LPLFALQNDTVVEIQGEPASVHKAVELI 195
Query: 203 TSRLRE--------TIFPMKRPGPNN-GHSYLPPFPEMPPPPFRPRHNPASPGSYPS 250
S LR+ +F M+ PN G+ +PP P P + PG P+
Sbjct: 196 ASNLRKFLVDRSVIKVFEMEMQKPNTQGNENMPPQQSWDPSQVFPINTGGEPGFVPN 252
>gi|193848519|gb|ACF22709.1| hypothetical protein-2 [Brachypodium distachyon]
Length = 429
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 55/155 (35%), Positives = 86/155 (55%), Gaps = 4/155 (2%)
Query: 36 ETVGGRNRMFYEEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEER 95
+ V G +++ F+LLCH++ G LIGK G I++ F+ ETGASI + + ER
Sbjct: 267 QDVAGNVETENLQQISFRLLCHVNLAGGLIGKKGMIIKGFETETGASIDVGNPFSGCMER 326
Query: 96 IVVISARENSEMRHSPAQDAVMRVHSRIAEI--GFEPGQ-AVVARLLVHSQQIGCLLGRG 152
++ ISA E S +HS Q A++ + R+ E+ G+ AR+LV Q L+G G
Sbjct: 327 VITISALE-SPGKHSKVQSAILCIFDRMEEVERNLMFGKPECSARVLVPKSQFSSLVGLG 385
Query: 153 GHIVSEMRRATGASIRVFPKDQAPRCGSPHDEIVQ 187
G I+ EM ++TGA I + + P C S + ++Q
Sbjct: 386 GAIIKEMVKSTGARIEILDEMDVPACASNCERVLQ 420
>gi|449442959|ref|XP_004139248.1| PREDICTED: poly(rC)-binding protein 3-like [Cucumis sativus]
Length = 483
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/171 (34%), Positives = 89/171 (52%), Gaps = 9/171 (5%)
Query: 49 EVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMR 108
E VF++L KVGS+IG+ G ++ ET A IKI D P + ER V++SA++ +
Sbjct: 84 ESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTAERAVMVSAKDEPDSA 143
Query: 109 HSPAQDAVMRVHSRIAEIGFE--------PGQAVVARLLVHSQQIGCLLGRGGHIVSEMR 160
PA D ++RVH RI + G E G V RLLV + Q G L+G+ G V ++
Sbjct: 144 FPPAVDGLLRVHKRIVD-GLEGDNAHAPNAGSKVSTRLLVAASQAGSLIGKQGGTVKSIQ 202
Query: 161 RATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIF 211
+ +RV + P D +V+V+G+ V A+ I S LR+ +
Sbjct: 203 EESNCIVRVLGSEDLPVFALQDDRVVEVLGDPAGVHKAVELIASHLRKFLV 253
>gi|307136423|gb|ADN34230.1| hypothetical protein [Cucumis melo subsp. melo]
Length = 331
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 106/210 (50%), Gaps = 32/210 (15%)
Query: 31 SGPGHETVGGR-------------------NRMFYEEEVVFKLLCHLDKVGSLIGKGGSI 71
S PGH G R R +V+F+++ ++G +IGK G
Sbjct: 31 SEPGHTVTGKRRREDDLIVSNSDASDVSAPKRQAKAHDVLFRIVVPSKQIGKVIGKVGCR 90
Query: 72 VRTFQNETGASIKIADILPDSEERIVVISARENSEMRHSPAQDAVMRVH--------SRI 123
++ + ET A+IKIAD + EER+++IS+++N E + A+ A+ ++ S I
Sbjct: 91 IQKVREETKATIKIADAVARYEERVIIISSKDN-ENSVTDAEKALQQIAALILKEDGSSI 149
Query: 124 AEIGFEPGQ--AVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAPRCGSP 181
E+ G A RLL+ Q G L+G G + ++R ++GASI + +Q P C S
Sbjct: 150 EELKVGTGHVAANTIRLLIAGSQAGSLIGASGQNIEKLRNSSGASITILAPNQLPLCASA 209
Query: 182 H--DEIVQVIGNYHSVQDALFHITSRLRET 209
H D +VQ+ G+ +V AL I ++LR+T
Sbjct: 210 HESDRVVQISGDILAVLKALEEIGNQLRKT 239
>gi|255541092|ref|XP_002511610.1| conserved hypothetical protein [Ricinus communis]
gi|223548790|gb|EEF50279.1| conserved hypothetical protein [Ricinus communis]
Length = 363
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 56/174 (32%), Positives = 98/174 (56%), Gaps = 14/174 (8%)
Query: 48 EEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEM 107
++V+F+++ ++G +IGK G ++ + ET A+IKIAD + EER+++IS++E S+
Sbjct: 69 QDVIFRIVVPSRQIGKVIGKVGCRIQKIREETKATIKIADAIARHEERVIIISSKE-SDC 127
Query: 108 RHSPAQDAVMRVHSRIAEIGFEPGQ-----------AVVARLLVHSQQIGCLLGRGGHIV 156
S A++A+ ++ + I + P + A RLL+ Q G L+G G +
Sbjct: 128 VVSDAENALKKIATLILKEDESPAESSKVVGAGHLGANTIRLLIAGSQAGSLIGVSGQNI 187
Query: 157 SEMRRATGASIRVFPKDQAPRCGSPH--DEIVQVIGNYHSVQDALFHITSRLRE 208
++R ++GA+I V +Q P C S H D +VQ+ G+ V A+ I +LRE
Sbjct: 188 EKLRNSSGATITVLAPNQLPLCASAHESDRVVQISGDVPVVLKAVEEIGCQLRE 241
>gi|357146019|ref|XP_003573848.1| PREDICTED: KH domain-containing protein At4g18375-like
[Brachypodium distachyon]
Length = 470
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 94/379 (24%), Positives = 153/379 (40%), Gaps = 67/379 (17%)
Query: 51 VFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPD-SEERIVVISARENSEMRH 109
VF+L+ DKVG LIG+ G +R ET A +++ D + ++IV+ISA E ++
Sbjct: 88 VFRLVVAGDKVGGLIGRRGETIRRLCEETRARVRVLDPADGVAGQQIVLISATEETQAEL 147
Query: 110 SPAQDAVMRVHSRIAEI-GFEPG--------QAVVARLLVHSQQIGCLLGRGGHIVSEMR 160
+PA DA +++ + EI G + ARLLV +Q L+G+ G ++ ++
Sbjct: 148 APAMDAAIKIFKHVNEIEGINASVTFSASAPEICSARLLVPKEQAAHLIGKQGIMIKSIQ 207
Query: 161 RATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKRPGPNN 220
TG++IR+ KD + IV+++G +AL + LR+ +
Sbjct: 208 ETTGSTIRIIDKDDLLNYRMVDERIVEILGASLKALNALKSVLGLLRKFLV--------- 258
Query: 221 GHSYLPPFPEMPPPPFRPRHNPASPGSYPSPVGPFHSMDRGMGPSQPFDHQAAFSHGMDP 280
HS L F R N A + S D + P S G P
Sbjct: 259 DHSVLHLF---------ERKNQAIAHAQDISKENQVSNDYAL----PVSRDLLLSDGQSP 305
Query: 281 MVPPNSDRIPFPYGSERPGHGPTFDRPPSPRSWTPQGVGGGDPRGFDASSGFTPRNRPVE 340
+ P + + + G DP D S + P E
Sbjct: 306 LSPKGNRYLSY----------------------------GRDPSVCDPYS--SQIRHPTE 335
Query: 341 SGNHAAILTSTTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATEGVVMV 400
S ++ T + IP + G N++HIR +SGA VV+ + E +V +
Sbjct: 336 S-----LIKKITQTMKIPLPQADEIIGVGGRNIAHIRSVSGAIVVLEETGDYLNEVLVTI 390
Query: 401 SGTSDQMRAAQSLIHAFIL 419
G+S Q+ A L+ +L
Sbjct: 391 QGSSSQVHTAHQLVQVILL 409
>gi|449445515|ref|XP_004140518.1| PREDICTED: poly(rC)-binding protein 2-like [Cucumis sativus]
gi|449529952|ref|XP_004171961.1| PREDICTED: poly(rC)-binding protein 2-like [Cucumis sativus]
Length = 276
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 104/208 (50%), Gaps = 32/208 (15%)
Query: 31 SGPGHETVGGR-------------------NRMFYEEEVVFKLLCHLDKVGSLIGKGGSI 71
S PGH G R R +V+F+++ ++G +IGK G
Sbjct: 31 SEPGHTVTGKRRREDDLIVSNSDASDISAPKRQAKAHDVLFRIVVPSKQIGKVIGKVGCR 90
Query: 72 VRTFQNETGASIKIADILPDSEERIVVISARENSEMRHSPAQDAVMRVH--------SRI 123
++ + ET A+IKIAD + EER+++IS+++N E + A+ A+ ++ S I
Sbjct: 91 IQKVREETKATIKIADAVARYEERVIIISSKDN-ENSVTDAEKALQQIAALILKEDGSSI 149
Query: 124 AEIGFEPGQ--AVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAPRCGSP 181
E+ G A RLL+ Q G L+G G + ++R ++GASI + +Q P C S
Sbjct: 150 EELKVGTGHVAANTIRLLIAGSQAGSLIGASGQNIEKLRNSSGASITILAPNQLPLCASA 209
Query: 182 H--DEIVQVIGNYHSVQDALFHITSRLR 207
H D +VQ+ G+ +V AL I ++LR
Sbjct: 210 HESDRVVQISGDILAVLKALEEIGNQLR 237
>gi|302814684|ref|XP_002989025.1| hypothetical protein SELMODRAFT_447544 [Selaginella moellendorffii]
gi|300143126|gb|EFJ09819.1| hypothetical protein SELMODRAFT_447544 [Selaginella moellendorffii]
Length = 1034
Score = 94.7 bits (234), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 59/174 (33%), Positives = 95/174 (54%), Gaps = 15/174 (8%)
Query: 60 KVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMRHSPAQDAVMRV 119
K+G +IGK GS ++ ++ETGA IKIAD + +E+R V+IS++ S A+ A++ V
Sbjct: 512 KIGKVIGKKGSQIKKLRDETGAHIKIADPMNTTEDRAVLISSKNEGVSDRSCAELALLEV 571
Query: 120 HSRIAE--IGFEPGQAV---------VARLLVHSQQIGCLLGRGGHIVSEMRRATGASIR 168
+ + + G P A+ + RLL+ Q G L+G+ G + +R ++ AS+R
Sbjct: 572 VTILLKDGDGATPSAAIGPQHQGSPNLTRLLIAGSQAGSLIGKAGANIKNIRGSSSASVR 631
Query: 169 VFPKDQAPRCGSP--HDEIVQVIGNYHSVQDALFHITSRLRETIFPMKRPGPNN 220
V P DQ P C + D +VQ+ G +VQ A+ + + LR+ P K P N
Sbjct: 632 VLPSDQLPLCSAACETDRLVQISGEVAAVQMAIELVAANLRDN--PPKETVPTN 683
Score = 40.4 bits (93), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 33/60 (55%)
Query: 347 ILTSTTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATEGVVMVSGTSDQ 406
+L + E+ +P M + G+ ++SH+R +SGA + VN K + E ++ GT +Q
Sbjct: 757 MLPKVSAEMSVPSSVMGGLIGKGGFHISHMRSVSGATIKVNGSKESSVERTILFEGTQEQ 816
>gi|449531912|ref|XP_004172929.1| PREDICTED: poly(rC)-binding protein 3-like [Cucumis sativus]
Length = 453
Score = 94.4 bits (233), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 59/168 (35%), Positives = 88/168 (52%), Gaps = 9/168 (5%)
Query: 49 EVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMR 108
E VF++L KVGS+IG+ G ++ ET A IKI D P + ER V++SA++ +
Sbjct: 84 ESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTAERAVMVSAKDEPDSA 143
Query: 109 HSPAQDAVMRVHSRIAEIGFE--------PGQAVVARLLVHSQQIGCLLGRGGHIVSEMR 160
PA D ++RVH RI + G E G V RLLV + Q G L+G+ G V ++
Sbjct: 144 FPPAVDGLLRVHKRIVD-GLEGDNAHAPNAGSKVSTRLLVAASQAGSLIGKQGGTVKSIQ 202
Query: 161 RATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRE 208
+ +RV + P D +V+V+G+ V A+ I S LR+
Sbjct: 203 EESNCIVRVLGSEDLPVFALQDDRVVEVLGDPAGVHKAVELIASHLRK 250
>gi|297804330|ref|XP_002870049.1| KH domain-containing protein [Arabidopsis lyrata subsp. lyrata]
gi|297315885|gb|EFH46308.1| KH domain-containing protein [Arabidopsis lyrata subsp. lyrata]
Length = 605
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 101/184 (54%), Gaps = 16/184 (8%)
Query: 30 SSGPGHETVGGRNRMFYEEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADIL 89
SS P GG +R +E+V K+LC L + +IGKGGS ++ + +G+ I++ D
Sbjct: 294 SSLPVTHGFGGSSR---SKELVLKVLCPLSNITRVIGKGGSTIKRIRETSGSCIEVNDSR 350
Query: 90 PDS--EERIVVISARENSEMRHSPAQDAVMRVHSRIAEIGFEPGQAVVARLLVHSQQIGC 147
+E +++++A E+ + S A +AV+ + I + E + V +L V S+ IGC
Sbjct: 351 TKCGDDECVIIVTATESPDDMKSMAVEAVLLLQEYIND---EDAEKVKMQLFVSSKDIGC 407
Query: 148 LLGRGGHIVSEMRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLR 207
++G+ G +++E+R+ T A+I + D++V+V G SV++A+ I RLR
Sbjct: 408 VIGKSGSVINEIRKRTNANICISK--------GKKDDLVEVAGEISSVRNAIIQIVLRLR 459
Query: 208 ETIF 211
E +
Sbjct: 460 EDVL 463
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 91/180 (50%), Gaps = 20/180 (11%)
Query: 47 EEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVI--SAREN 104
+E V++++LC +D VG +IGK G ++ ++ T A IK+ D L +R++ I S +E
Sbjct: 35 DELVIYRILCPIDVVGGVIGKSGKVINAIRHNTKAKIKVFDQLHGCSQRVITIYCSVKEK 94
Query: 105 SE-----MRHSP-----AQDAVMRVHSRIA-----EIGFEPGQAVVARLLVHSQQIGCLL 149
E M+ AQDA+++V+ I I + LLV S Q L+
Sbjct: 95 KEEEIDFMKSETEPLCCAQDALLKVYDAIVASDEENIKIDRDDKKECLLLVPSSQSFSLI 154
Query: 150 GRGGHIVSEMRRATGASIRVFPKDQAP---RCGSPHDEIVQVIGNYHSVQDALFHITSRL 206
G+ G + +R T AS++V KD + C +D IV + G SV+ ALF +++ L
Sbjct: 155 GKAGENIKRIRSTTRASVKVVSKDVSDPSHVCAMDYDNIVVISGEPESVKKALFAVSAIL 214
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 49/71 (69%)
Query: 349 TSTTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATEGVVMVSGTSDQMR 408
+S+ +E++IP M+ V G+ NL +IR+ISGA + ++D K + + ++SGT +QMR
Sbjct: 533 SSSALEILIPANAMSKVMGKGGGNLENIRRISGAMIEISDSKTSQGDHIALLSGTLEQMR 592
Query: 409 AAQSLIHAFIL 419
A++L+ AFI+
Sbjct: 593 CAENLVQAFIM 603
>gi|195658007|gb|ACG48471.1| hypothetical protein [Zea mays]
Length = 157
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/157 (38%), Positives = 85/157 (54%), Gaps = 8/157 (5%)
Query: 269 DHQAAFSHGMDPMVPPNSDRIPFPYGSERPGHGPTFDRPPSPRSWTPQG--VGGGDPRGF 326
DH+ H M+ M +DR+P+ YG E+ G P ++P SPR+ P+ PR
Sbjct: 3 DHRPPPVHSMEYM---GADRMPYLYGVEQGGPRPFLEQP-SPRTCPPEAPRTNSEVPRNM 58
Query: 327 -DASSGFTPRNRPVESGNHAAILTSTTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVV 385
DA R PV N A T TT EV+IP Y+ V G N S + I ++SGA++
Sbjct: 59 SDAVPATDFRKGPVAIENQVATPTGTT-EVIIPCNYIGFVCGNNGSEIEEIEKMSGASIT 117
Query: 386 VNDPKPGATEGVVMVSGTSDQMRAAQSLIHAFILCGV 422
V+DPK G V++ G ++ + AQSLIHAFI CG+
Sbjct: 118 VHDPKAGDANSKVVICGDPEETKKAQSLIHAFIFCGL 154
>gi|224137186|ref|XP_002327061.1| predicted protein [Populus trichocarpa]
gi|222835376|gb|EEE73811.1| predicted protein [Populus trichocarpa]
Length = 357
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/225 (31%), Positives = 111/225 (49%), Gaps = 23/225 (10%)
Query: 3 VQGNPYPPAAEPFHQRGYAPGYHSRGYSSGPGHETVGGRNRMFYEEEVVFKLLCHLDKVG 62
+Q NP PP E + P R G ET + + +V+F+++ K+G
Sbjct: 7 LQLNPSPPGTE-LPKLNALPVTAKRRRDDFDGGETSAAKRQA--RADVIFRIVVPSGKIG 63
Query: 63 SLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMRHSPAQDAVMRVHSR 122
+IGK G ++ + +T A+IKIAD + EER+++IS++EN E + A++A+ R+
Sbjct: 64 KVIGKQGHRIQKIREDTKATIKIADAVARHEERVIIISSKEN-ENGATDAENALQRIAEL 122
Query: 123 I-------------AEIGFEPGQAVVA----RLLVHSQQIGCLLGRGGHIVSEMRRATGA 165
I EIG VA RLL+ Q G L+G G + ++R ++GA
Sbjct: 123 ILNEDDGGSSAGGGVEIGKLVNAGHVAANTIRLLIAGSQAGSLIGMSGQNIVKLRNSSGA 182
Query: 166 SIRVFPKDQAPRCGSPH--DEIVQVIGNYHSVQDALFHITSRLRE 208
I V +Q P C S + D +VQ+ G+ V AL I +LRE
Sbjct: 183 MITVLAPNQLPLCASAYESDRVVQISGDVPVVLKALEEIGCQLRE 227
>gi|124359391|gb|ABN05855.1| KH, type 1 [Medicago truncatula]
Length = 222
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 55/174 (31%), Positives = 92/174 (52%), Gaps = 21/174 (12%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSE--- 106
V F+LLC+ ++G +IGK G++++ Q TGA I+I D +S +R++++ N +
Sbjct: 48 VAFRLLCNSSRIGGVIGKSGTVIKNLQLTTGAKIRIEDSPNESPDRVIMVIGASNIDGKV 107
Query: 107 -----------MRHSPAQDAVMRVHSRIAEI-----GFEPG-QAVVARLLVHSQQIGCLL 149
+ S AQ+A++RV RI E+ G E G + V RL+ S Q G ++
Sbjct: 108 MVRSHSGDGEAIEVSKAQEALLRVFDRILEVAAEMEGIELGDRTVSCRLVADSAQAGSVI 167
Query: 150 GRGGHIVSEMRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHIT 203
G+GG +V ++++ TG I V KD P C S DE+++ + A+ I
Sbjct: 168 GKGGKVVEKIKKDTGCKIWVC-KDNLPACISSPDEVIECSASRSMFGSAVTRIV 220
>gi|302816563|ref|XP_002989960.1| hypothetical protein SELMODRAFT_428421 [Selaginella moellendorffii]
gi|300142271|gb|EFJ08973.1| hypothetical protein SELMODRAFT_428421 [Selaginella moellendorffii]
Length = 393
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 58/168 (34%), Positives = 85/168 (50%), Gaps = 30/168 (17%)
Query: 51 VFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMRHS 110
VF+L+ L KVG++IG+ G V+ ET + IKI D +P + ERIV++SA+E+ E S
Sbjct: 50 VFRLIVPLHKVGAIIGRKGEFVKRMCEETRSRIKILDGVPGTLERIVLVSAKEDPEATIS 109
Query: 111 PAQDAVMRVHSRIAEIG----------FEPGQAVVARLLVHSQQIGCLLGRGGHIVSEMR 160
PA D ++RVH R+ E P V +RLLV + Q G L+GR
Sbjct: 110 PAMDGLLRVHRRVTEGSSGDGEPVEHIILPSGLVQSRLLVTATQAGSLIGR--------- 160
Query: 161 RATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRE 208
+++ P C D +V+V G VQ A+ + S LR+
Sbjct: 161 -----------QEELPLCALADDRMVEVQGEILKVQKAMELVVSHLRK 197
>gi|302803885|ref|XP_002983695.1| hypothetical protein SELMODRAFT_445667 [Selaginella moellendorffii]
gi|300148532|gb|EFJ15191.1| hypothetical protein SELMODRAFT_445667 [Selaginella moellendorffii]
Length = 1020
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 54/162 (33%), Positives = 91/162 (56%), Gaps = 13/162 (8%)
Query: 60 KVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMRHSPAQDAVMRV 119
K+G +IGK GS ++ ++ETGA IKIAD + +E+R V+IS++ + A+ A++ V
Sbjct: 513 KIGKVIGKKGSQIKKLRDETGAHIKIADPMNTTEDRAVLISSKNEGGSDRTCAELALLEV 572
Query: 120 HSRIAE--IGFEPGQAV---------VARLLVHSQQIGCLLGRGGHIVSEMRRATGASIR 168
+ + + G P A+ + RLL+ Q G L+G+ G + +R ++ AS+R
Sbjct: 573 VTILLKDGDGATPSAAIGPQHQGSPNLTRLLIAGSQAGSLIGKAGANIKNIRGSSSASVR 632
Query: 169 VFPKDQAPRCGSP--HDEIVQVIGNYHSVQDALFHITSRLRE 208
V P DQ P C + D +VQ+ G +VQ A+ + + LR+
Sbjct: 633 VLPSDQLPLCSAACETDRLVQISGEVAAVQMAIELVAANLRD 674
Score = 40.4 bits (93), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 33/60 (55%)
Query: 347 ILTSTTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATEGVVMVSGTSDQ 406
+L + E+ +P M + G+ ++SH+R +SGA + VN K + E ++ GT +Q
Sbjct: 758 MLPKVSAEMSVPSSVMGGLIGKGGFHISHMRSVSGATIKVNGSKESSVERTILFEGTQEQ 817
>gi|356530005|ref|XP_003533576.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine
max]
Length = 385
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 115/222 (51%), Gaps = 25/222 (11%)
Query: 7 PYP-PAAEPFHQRGYAPGYHSR-------GYSSGPGHETVGGRNRMFYEEEVVFKLLCHL 58
P P P PF + AP R G +S P ++ R + ++V+F+++
Sbjct: 55 PLPMPLQIPFSVQDTAPSSGKRRRDDENSGTASAP-EQSAAKRAK---GQDVIFRIVVPS 110
Query: 59 DKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMRHSPAQDAVMR 118
++G +IGK G ++ + +T A+IKIAD + EER+++IS+++N E + + A+ A+ +
Sbjct: 111 RQIGKVIGKEGHRIQKIREDTKATIKIADAIARHEERVIIISSKDNDE-KVTDAEKALEQ 169
Query: 119 V-HSRIAEIGFEPGQAVVA---------RLLVHSQQIGCLLGRGGHIVSEMRRATGASIR 168
+ H + E + V RLL+ Q G L+G G + ++R ++GASI
Sbjct: 170 IAHLILKEDDSSLDASKVTAGHVAANTIRLLIAGSQAGGLIGMSGQNIEKLRDSSGASIT 229
Query: 169 VFPKDQAPRCGSPH--DEIVQVIGNYHSVQDALFHITSRLRE 208
V +Q P C S H D +VQ+ G+ +V AL I +LRE
Sbjct: 230 VLAPNQLPLCASAHESDRVVQLSGDVPAVMKALEEIGCQLRE 271
>gi|356530338|ref|XP_003533739.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine
max]
Length = 443
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 99/198 (50%), Gaps = 22/198 (11%)
Query: 49 EVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMR 108
+ VF+L+ + KVGS+IG+ G +++ ET + I++ D + +RIV++S +E+ E
Sbjct: 52 DCVFRLIVPVGKVGSIIGRKGELIKKMCEETRSRIRVLDAPLGTPDRIVLVSGKEDPEAA 111
Query: 109 HSPAQDAVMRVHSRIAEIGFEPGQA-----------VVARLLVHSQQIGCLLGRGGHIVS 157
SPA DAV+R+ R++ GF A RLLV S Q L+G+ G ++
Sbjct: 112 LSPAMDAVVRIFKRVS--GFSETDAENQESAAGLAFSSIRLLVASTQAINLIGKQGSLIK 169
Query: 158 EMRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKRPG 217
++ T AS+RV D+ + ++ IV++ G V AL + LR+ +
Sbjct: 170 SIQENTSASVRVLSGDEVQFYATANERIVEIQGEALKVLKALEAVVGHLRKFLV------ 223
Query: 218 PNNGHSYLPPFPEMPPPP 235
HS LP F + P
Sbjct: 224 ---DHSVLPLFEKTYNAP 238
Score = 40.8 bits (94), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
Query: 345 AAILTSTTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATEGVVMVSGTS 404
A I+T+ + IP Y + G +N+ +IR+ SGA + V + + E VV + GTS
Sbjct: 314 APIVTTVIQTMQIPLSYAEDIIGIQGTNIEYIRRTSGAILTVQESRV-PDEIVVEIKGTS 372
Query: 405 DQMRAAQSLIHAFI 418
+++ AQ LI I
Sbjct: 373 SEVQTAQQLIQDVI 386
>gi|412992928|emb|CCO16461.1| predicted protein [Bathycoccus prasinos]
Length = 703
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/170 (32%), Positives = 98/170 (57%), Gaps = 12/170 (7%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDS-EERIVVISARENSE-M 107
++++LLC + GS+IGK G V+ Q ++GA IK+ + + ER++ I A++ +
Sbjct: 265 LLYRLLCPNARAGSVIGKNGEKVKQLQRDSGAKIKVEPPVDSTIAERVIAIEAQDVDDPT 324
Query: 108 RHSPAQDAVMRVHSRI---AEIGFEPGQA------VVARLLVHSQQIGCLLGRGGHIVSE 158
+P+Q A++R+ I AE G A +V RLL+ S QI ++GR G+++
Sbjct: 325 VWAPSQIALLRIVETIVLDAERNTTIGAAEENNGHIVIRLLLPSSQIRNVIGRFGNVIER 384
Query: 159 MRRATGASIRVFPKDQAPRCGSPHDEIVQVIG-NYHSVQDALFHITSRLR 207
+R +G+ +RV P + PRC +DE++Q+ + +V AL IT++LR
Sbjct: 385 IRVGSGSHVRVLPSSETPRCAKRNDEVLQISAESMENVASALAMITTQLR 434
>gi|7486302|pir||T04533 hypothetical protein F28J12.30 - Arabidopsis thaliana
gi|2832642|emb|CAA16717.1| putative protein [Arabidopsis thaliana]
gi|7268630|emb|CAB78839.1| putative protein [Arabidopsis thaliana]
Length = 846
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/199 (31%), Positives = 104/199 (52%), Gaps = 32/199 (16%)
Query: 30 SSGPGHETVGGRNRMFYEEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADIL 89
SS P GG +R EE+VFK+LC L + +IGKGGS ++ + +G+ I++ D
Sbjct: 603 SSLPVTHGFGGSSR---SEELVFKVLCPLCNIMRVIGKGGSTIKRIREASGSCIEVNDSR 659
Query: 90 PDS--EERIVVISAREN---------------SEMRHSPAQDAVMRVHSRIAEIGFEPGQ 132
+E +++++A E +M+ S A +AV+ + I + E +
Sbjct: 660 TKCGDDECVIIVTATEILFCCLSTPFVFMQSPDDMK-SMAVEAVLLLQEYIND---EDAE 715
Query: 133 AVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNY 192
V +LLV S+ IGC++G+ G +++E+R+ T A+I + D++V+V G
Sbjct: 716 NVKMQLLVSSKVIGCVIGKSGSVINEIRKRTNANICISK--------GKKDDLVEVSGEV 767
Query: 193 HSVQDALFHITSRLRETIF 211
SV+DAL I RLRE +
Sbjct: 768 SSVRDALIQIVLRLREDVL 786
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 94/185 (50%), Gaps = 22/185 (11%)
Query: 42 NRMFYEEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVI-- 99
+++ +E VV+++LC +D VG +IGK G ++ ++ T A IK+ D L +R++ I
Sbjct: 336 DKINRDELVVYRILCPIDVVGGVIGKSGKVINAIRHNTKAKIKVFDQLHGCSQRVITIYC 395
Query: 100 SARENSE------MRHSP---AQDAVMRVHSRI--------AEIGFEPGQAVVARLLVHS 142
S +E E + P AQDA+++V+ I + + RLLV
Sbjct: 396 SVKEKQEEIGFTKSENEPLCCAQDALLKVYDAIVASDEENNTKTNVDRDDNKECRLLVPF 455
Query: 143 QQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAP---RCGSPHDEIVQVIGNYHSVQDAL 199
Q L+G+ G + +RR T AS++V KD + C +D +V + G SV+ AL
Sbjct: 456 SQSSSLIGKAGENIKRIRRRTRASVKVVSKDVSDPSHVCAMEYDNVVVISGEPESVKQAL 515
Query: 200 FHITS 204
F +++
Sbjct: 516 FAVSA 520
>gi|357507881|ref|XP_003624229.1| Poly(rC)-binding protein [Medicago truncatula]
gi|355499244|gb|AES80447.1| Poly(rC)-binding protein [Medicago truncatula]
Length = 275
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/172 (31%), Positives = 96/172 (55%), Gaps = 13/172 (7%)
Query: 48 EEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEM 107
++V+F+++ ++G +IGK G ++ + T A+IKIAD + EER+++IS+++N EM
Sbjct: 98 QDVIFRIVVPSKQIGKVIGKEGCRIQKIREMTRANIKIADAIARHEERVIIISSKDNDEM 157
Query: 108 RHSPAQDAVMRVHSRIAE---IGFEPGQ-------AVVARLLVHSQQIGCLLGRGGHIVS 157
+ A+ A+ ++ + I + F+ + A RLL+ Q G L+G G +
Sbjct: 158 V-TDAEKALEQIANLILKEDNSSFDASKLTAGHVAANTIRLLIAGSQAGGLIGMSGQNIE 216
Query: 158 EMRRATGASIRVFPKDQAPRCGSPH--DEIVQVIGNYHSVQDALFHITSRLR 207
++R ++GA I V Q P C S H D +VQ+ G+ +V AL I +LR
Sbjct: 217 KLRNSSGAMITVLAPSQLPLCASAHESDRVVQLSGDVSTVMKALEEIGCQLR 268
>gi|147789387|emb|CAN73316.1| hypothetical protein VITISV_043333 [Vitis vinifera]
Length = 511
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 84/168 (50%), Gaps = 13/168 (7%)
Query: 48 EEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVI-------S 100
++ +++ LC K+GS+I +G IV+ + +T I I D + EE +V I +
Sbjct: 290 KDTIYRYLCPGKKIGSIIRRGWKIVKQQRVDTKPKISIGDTVSGCEEHVVTIYNFSIESN 349
Query: 101 ARENSEMRHSPAQDAVMRVHSRIAEIGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSEMR 160
+NS SP Q+ + RVH R+ V + QIGC++G+GG I+ +R
Sbjct: 350 VFDNSNTFVSPTQNVLFRVHDRVIS------DEVHDENFEEASQIGCVIGKGGQIIQSIR 403
Query: 161 RATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRE 208
+GA IR+ D P D+++Q+ G V AL+ I SRL +
Sbjct: 404 SESGAQIRILKDDHLPSRVLSSDKLIQISGEPSLVMKALYQIASRLHD 451
>gi|242038781|ref|XP_002466785.1| hypothetical protein SORBIDRAFT_01g014200 [Sorghum bicolor]
gi|241920639|gb|EER93783.1| hypothetical protein SORBIDRAFT_01g014200 [Sorghum bicolor]
Length = 430
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/171 (33%), Positives = 90/171 (52%), Gaps = 10/171 (5%)
Query: 49 EVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMR 108
E VF++L KVG++IG+ G ++ ET A IKI D P ER V+ISA++ +
Sbjct: 120 ESVFRILVPAQKVGAIIGRKGEFIKKMCEETKARIKILDGPPGVPERAVMISAKDEPDAP 179
Query: 109 HSPAQDAVMRVHSRIAEIGF-EPGQAVVA-------RLLVHSQQIGCLLGRGGHIVSEMR 160
SPA D ++RVH RI + E GQ + RLLV S Q G L+G+ G + ++
Sbjct: 180 LSPAVDGLLRVHKRITDSSNGESGQLQRSAGNIGPTRLLVPSSQAGSLIGKQGATIKSIQ 239
Query: 161 RATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIF 211
++ + +R+ + P D +V++ G VQ A+ I S LR+ +
Sbjct: 240 DSSKSVVRIV--ENVPPVALNDDRVVEIQGEPLGVQKAVELIASHLRKFLV 288
>gi|15236094|ref|NP_194330.1| RNA-binding KH domain-containing protein [Arabidopsis thaliana]
gi|4538929|emb|CAB39665.1| putative nucleic acid binding protein [Arabidopsis thaliana]
gi|7269451|emb|CAB79455.1| putative nucleic acid binding protein [Arabidopsis thaliana]
gi|15810499|gb|AAL07137.1| putative nucleic acid binding protein [Arabidopsis thaliana]
gi|20466386|gb|AAM20510.1| putative nucleic acid binding protein [Arabidopsis thaliana]
gi|21280915|gb|AAM45112.1| putative nucleic acid binding protein [Arabidopsis thaliana]
gi|332659742|gb|AEE85142.1| RNA-binding KH domain-containing protein [Arabidopsis thaliana]
Length = 495
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/167 (31%), Positives = 88/167 (52%), Gaps = 8/167 (4%)
Query: 49 EVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMR 108
+ VF+++ + KVG++IG+ G ++ ET A IK+ D ++ +RIV+IS +E E
Sbjct: 73 DCVFRMIVPVTKVGAIIGRKGDFIKKMCEETRARIKVLDGPVNTPDRIVLISGKEEPEAY 132
Query: 109 HSPAQDAVMRVHSRIAEIGFEPGQAV--------VARLLVHSQQIGCLLGRGGHIVSEMR 160
SPA DAV+RV R++ + V RLLV S Q L+G+ G ++ +
Sbjct: 133 MSPAMDAVLRVFRRVSGLPDNDDDDVQNAGSVFSSVRLLVASTQAINLIGKQGSLIKSIV 192
Query: 161 RATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLR 207
+GAS+R+ +++ P + + IV + G + AL I LR
Sbjct: 193 ENSGASVRILSEEETPFYAAQDERIVDLQGEALKILKALEAIVGHLR 239
Score = 42.7 bits (99), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 47/88 (53%), Gaps = 1/88 (1%)
Query: 332 FTPRNRPVESGNHAAILTSTTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKP 391
+ R+ P + +A +T + + IP Y + G +N+++IR+ SGA + + + P
Sbjct: 322 LSARHSPGLARVSSAFVTQVSQTMQIPFSYAEDIIGVEGANIAYIRRRSGATITIKE-SP 380
Query: 392 GATEGVVMVSGTSDQMRAAQSLIHAFIL 419
+ V + GT+ Q++ A+ LI FI+
Sbjct: 381 HPDQITVEIKGTTSQVQTAEQLIQEFII 408
>gi|340726176|ref|XP_003401437.1| PREDICTED: poly(rC)-binding protein 3-like [Bombus terrestris]
Length = 466
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 98/377 (25%), Positives = 160/377 (42%), Gaps = 68/377 (18%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMRH 109
+ +L+ +VGS+IGK G IV+ F+ E+GA I I+D ERIV ++ NS +
Sbjct: 18 LTIRLIMQGKEVGSIIGKKGEIVKRFREESGAKINISD--GSCPERIVTVTGPTNSIFKA 75
Query: 110 -----SPAQDAVMRVHSRIAEIGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATG 164
++ + H I G P + RL+V + Q G L+G+GG + E+R TG
Sbjct: 76 FTLICKKFEEWCSQFHD-IQGSGGVPRPPITLRLIVPASQCGSLIGKGGSKIKEIREVTG 134
Query: 165 ASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKRPGPNNGHSY 224
ASI+V D P + + V + G ++ ++HI + E+ P G +
Sbjct: 135 ASIQV-ASDMLP---NSTERAVTISGTSEAITQCIYHICCVMLES--------PPKGATI 182
Query: 225 LPPFPEMPPPPFRPRHNPASPGSYPSPVGPFHSMDRGMGPSQPFDHQAAFSHGMDPMVPP 284
P+RP+ P GP + Q + Q ++ VP
Sbjct: 183 ----------PYRPK---------PQVGGPVI-----LAGGQAYTIQGNYA------VPA 212
Query: 285 NSDRIPFPYGSERPGHGPTFDRPPSPRSWTPQGVGGGDPRGFDASSGFTPR----NRPVE 340
+SD G TP GG +P A +G R NR
Sbjct: 213 HSD-----MGKLGSNPLAGLAALGLGGLATPANTGGLNPAALAALAGSQLRTSNTNRQQP 267
Query: 341 SGNHAAILTSTTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKP---GATEGV 397
+GN+ T E+ +P + + G+ + ++ IRQISGA + +++ + GAT+
Sbjct: 268 AGNNQ------THEMTVPNELIGCIIGKGGTKIAEIRQISGAMIRISNCEEREGGATDRT 321
Query: 398 VMVSGTSDQMRAAQSLI 414
+ ++G D + AQ LI
Sbjct: 322 ITITGNPDAVALAQYLI 338
Score = 42.7 bits (99), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 40/67 (59%), Gaps = 2/67 (2%)
Query: 137 RLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQ 196
+ V ++ IGC++G+GG ++E+R+ +GA IR+ ++ R G D + + GN +V
Sbjct: 275 EMTVPNELIGCIIGKGGTKIAEIRQISGAMIRISNCEE--REGGATDRTITITGNPDAVA 332
Query: 197 DALFHIT 203
A + I+
Sbjct: 333 LAQYLIS 339
Score = 40.0 bits (92), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 38/80 (47%), Gaps = 7/80 (8%)
Query: 129 EPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAPRCGSPHDEIVQV 188
+P + RL++ +++G ++G+ G IV R +GA I + GS + IV V
Sbjct: 13 DPSVTLTIRLIMQGKEVGSIIGKKGEIVKRFREESGAKINISD-------GSCPERIVTV 65
Query: 189 IGNYHSVQDALFHITSRLRE 208
G +S+ A I + E
Sbjct: 66 TGPTNSIFKAFTLICKKFEE 85
>gi|357449597|ref|XP_003595075.1| Poly(rC)-binding protein [Medicago truncatula]
gi|355484123|gb|AES65326.1| Poly(rC)-binding protein [Medicago truncatula]
Length = 470
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 95/190 (50%), Gaps = 17/190 (8%)
Query: 49 EVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMR 108
+ VF+L+ + KVG +IG+ G +++ +ET A +++ D +RI++IS +E E
Sbjct: 69 DCVFRLIVPVGKVGGIIGRKGDLIKKLCDETKARVRVLDADLGIPDRIILISGKEELEAA 128
Query: 109 HSPAQDAVMRVHSRIAEIGFEPGQ--------AVVARLLVHSQQIGCLLGRGGHIVSEMR 160
SPA DAV+R+ R++ + + RLLV S Q L+G+ G I+ ++
Sbjct: 129 ISPAMDAVIRIFKRVSGLSETDSENKGPAGVTLCSIRLLVASTQAISLIGKQGTIIRSIQ 188
Query: 161 RATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKRPGPNN 220
++GAS+RV D+ + + IV + G V AL + LR+ +
Sbjct: 189 ESSGASVRVLSGDEVQYFATAEERIVDLQGEALMVLKALEAVIGHLRKFLV--------- 239
Query: 221 GHSYLPPFPE 230
HS LP + +
Sbjct: 240 DHSILPVYEK 249
Score = 41.6 bits (96), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
Query: 345 AAILTSTTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATEGVVMVSGTS 404
A I+T+ + IP Y + G +N+ +IR+ SGA + V + + E VV + GT+
Sbjct: 331 APIVTTVIQTMQIPLSYAEDIIGIQGTNIDYIRRTSGAILTVQESRV-PDEIVVEIKGTT 389
Query: 405 DQMRAAQSLIHAFI 418
Q++ AQ LI I
Sbjct: 390 SQVQTAQQLIQEVI 403
>gi|224131210|ref|XP_002328482.1| predicted protein [Populus trichocarpa]
gi|222838197|gb|EEE76562.1| predicted protein [Populus trichocarpa]
Length = 346
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 97/343 (28%), Positives = 144/343 (41%), Gaps = 71/343 (20%)
Query: 98 VISARENSEMRHSPAQDAVMRVHSRIAEIGFE---------PGQAVVARLLVHSQQIGCL 148
++SA+E + PA D ++RVH RI + G E G V RLLV + Q G L
Sbjct: 1 MVSAKEEPDSSLPPAMDGLLRVHKRIID-GLEGDSSHAPPSSGAKVSTRLLVPASQAGSL 59
Query: 149 LGRGGHIVSEMRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRE 208
+G+ G V ++ A+ +RV + P D +V+V+G V A+ I S+LR+
Sbjct: 60 IGKQGGTVKSIQEASACIVRVLGAEDLPVFSLQDDRVVEVLGEAVGVHKAVELIASQLRK 119
Query: 209 T--------IFPMKRPGPNNGHSYLPPFPEMPPPPFRPRHNPASPGSYP-SPVGPFHSMD 259
+F M+ N PP +MP P + P S P +PVG
Sbjct: 120 FLVDRSIIPLFEMQMQMAN------PPMEQMP-----PHQSWGGPQSLPLNPVG------ 162
Query: 260 RGMGPSQPFDHQAAFSHGMDP--MVPPNSDRIPFPYGSERPGHGPTFDRPPSPRSWTPQG 317
GP +G +P M PP + + P D PP P P
Sbjct: 163 ---GP----------GYGQNPQYMQPPR----------QHDNYYPPSDMPP-PMEKQPH- 197
Query: 318 VGGGDPRGFDASSGFTPRNRPVESGNHAA--ILTSTTIEVVIPQLYMAHVYGENNSNLSH 375
+G A TP S AA ++T T ++ IP Y V G +++S+
Sbjct: 198 ------QGISAYGRQTPMGGHASSNAQAAPSMITQITQQMQIPLSYADAVIGTAGASISY 251
Query: 376 IRQISGANVVVNDPKPGATEGVVMVSGTSDQMRAAQSLIHAFI 418
IR+ SGA V + + + V +SGT+ Q++ AQ LI A
Sbjct: 252 IRRASGATVTIQETRGVPEAMTVEISGTASQVQTAQQLIQAIF 294
>gi|427796273|gb|JAA63588.1| Putative polyc-binding alphacp-1, partial [Rhipicephalus
pulchellus]
Length = 510
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 97/386 (25%), Positives = 158/386 (40%), Gaps = 82/386 (21%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMRH 109
+ +L+ +VGS+IGK G ++ F+ E+GA I I+D ERIV ++ + ++
Sbjct: 74 LTVRLIMQGKEVGSIIGKKGDNIKKFREESGAKINISD--GSCPERIVTVTGSTEAILK- 130
Query: 110 SPAQDAVMRVHSRIAEIGFEPGQAV-------------------VARLLVHSQQIGCLLG 150
A + R + + P Q V RL+V + Q G L+G
Sbjct: 131 --AFSLIARKFEEMLSLLCLPVQTVGPTLQELQSNGSHLPKPPVTLRLIVPASQCGSLIG 188
Query: 151 RGGHIVSEMRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETI 210
+GG + E+R TGASI+V + P + + V V G ++ ++ I + E+
Sbjct: 189 KGGSKIKEIREVTGASIQV-ASEMLP---NSTERAVTVSGTAEAITKCIYQICCVMMES- 243
Query: 211 FPMKRPGPNNGHSY-LPPFPEMPPPPFRPRHNPASPGSYPSPVGPFHSMDRGMGPSQPFD 269
P G + P P MPP F G Y P P
Sbjct: 244 -------PPKGATIPYRPKPAMPPVIFAGGQAYTVQGQYAIP-----------HPDLTKL 285
Query: 270 HQAAFSHGMDPMVPPNSDRIPFPYGSERPGHGPTFDRPPSPRSWTPQGVGGGDPRGFDAS 329
HQ A H P++P GH VG +P+ A+
Sbjct: 286 HQLALQHA--PLLP---------------GHS----------------VGAINPQAL-AA 311
Query: 330 SGFTPRNRPVESGNHAAILTSTTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDP 389
T RP + A ++TT E+ IP + + G+ S ++ IRQ+SGA + +++
Sbjct: 312 LATTNNLRPNTAAAAIATASTTTTEMTIPNDLIGCIIGKGGSKINEIRQLSGATIKISNS 371
Query: 390 KPGATEGVVMVSGTSDQMRAAQSLIH 415
+ G+ + V +SGT + + AQ LI+
Sbjct: 372 EEGSKDRTVTISGTPEAINLAQYLIN 397
>gi|328778258|ref|XP_391921.3| PREDICTED: poly(rC)-binding protein 3-like [Apis mellifera]
Length = 466
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 96/373 (25%), Positives = 157/373 (42%), Gaps = 60/373 (16%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMRH 109
+ +L+ +VGS+IGK G IV+ F+ E+GA I I+D ERIV ++ NS +
Sbjct: 18 LTIRLIMQGKEVGSIIGKKGEIVKRFREESGAKINISD--GSCPERIVTVTGPTNSIFKA 75
Query: 110 -----SPAQDAVMRVHSRIAEIGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATG 164
++ + H I G P + RL+V + Q G L+G+GG + E+R TG
Sbjct: 76 FTLICKKFEEWCSQFHD-IQGSGGVPRPPITLRLIVPASQCGSLIGKGGSKIKEIREVTG 134
Query: 165 ASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKRPGPNNGHSY 224
ASI+V D P + + V + G ++ ++HI + E+ P G +
Sbjct: 135 ASIQV-ASDMLP---NSTERAVTISGTSEAITQCIYHICCVMLES--------PPKGATI 182
Query: 225 LPPFPEMPPPPFRPRHNPASPGSYPSPVGPFHSMDRGMGPSQPFDHQAAFSHGMDPMVPP 284
P+RP+ P GP + Q + Q ++ VP
Sbjct: 183 ----------PYRPK---------PQVGGPVI-----LAGGQAYTIQGNYA------VPA 212
Query: 285 NSDRIPFPYGSERPGHGPTFDRPPSPRSWTPQGVGGGDPRGFDASSGFTPRNRPVESGNH 344
+SD G TP GG +P A +G R
Sbjct: 213 HSD-----MGKLGSNPLAGLAALGLGGLATPANTGGLNPAALAALAGSQLRTSNTNRQQP 267
Query: 345 AAILTSTTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKP---GATEGVVMVS 401
AA + T E+ +P + + G+ + ++ IRQISGA + +++ + GAT+ + ++
Sbjct: 268 AA--NNQTHEMTVPNELIGCIIGKGGTKIAEIRQISGAMIRISNCEEREGGATDRTITIT 325
Query: 402 GTSDQMRAAQSLI 414
G D + AQ LI
Sbjct: 326 GNPDAVSLAQYLI 338
Score = 42.7 bits (99), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 40/67 (59%), Gaps = 2/67 (2%)
Query: 137 RLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQ 196
+ V ++ IGC++G+GG ++E+R+ +GA IR+ ++ R G D + + GN +V
Sbjct: 275 EMTVPNELIGCIIGKGGTKIAEIRQISGAMIRISNCEE--REGGATDRTITITGNPDAVS 332
Query: 197 DALFHIT 203
A + I+
Sbjct: 333 LAQYLIS 339
Score = 40.0 bits (92), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 38/80 (47%), Gaps = 7/80 (8%)
Query: 129 EPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAPRCGSPHDEIVQV 188
+P + RL++ +++G ++G+ G IV R +GA I + GS + IV V
Sbjct: 13 DPSVTLTIRLIMQGKEVGSIIGKKGEIVKRFREESGAKINISD-------GSCPERIVTV 65
Query: 189 IGNYHSVQDALFHITSRLRE 208
G +S+ A I + E
Sbjct: 66 TGPTNSIFKAFTLICKKFEE 85
>gi|350405177|ref|XP_003487350.1| PREDICTED: poly(rC)-binding protein 3-like [Bombus impatiens]
Length = 466
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 96/373 (25%), Positives = 157/373 (42%), Gaps = 60/373 (16%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMRH 109
+ +L+ +VGS+IGK G IV+ F+ E+GA I I+D ERIV ++ NS +
Sbjct: 18 LTIRLIMQGKEVGSIIGKKGEIVKRFREESGAKINISD--GSCPERIVTVTGPTNSIFKA 75
Query: 110 -----SPAQDAVMRVHSRIAEIGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATG 164
++ + H I G P + RL+V + Q G L+G+GG + E+R TG
Sbjct: 76 FTLICKKFEEWCSQFHD-IQGSGGVPRPPITLRLIVPASQCGSLIGKGGSKIKEIREVTG 134
Query: 165 ASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKRPGPNNGHSY 224
ASI+V D P + + V + G ++ ++HI + E+ P G +
Sbjct: 135 ASIQV-ASDMLP---NSTERAVTISGTSEAITQCIYHICCVMLES--------PPKGATI 182
Query: 225 LPPFPEMPPPPFRPRHNPASPGSYPSPVGPFHSMDRGMGPSQPFDHQAAFSHGMDPMVPP 284
P+RP+ P GP + Q + Q ++ VP
Sbjct: 183 ----------PYRPK---------PQVGGPVI-----LAGGQAYTIQGNYA------VPA 212
Query: 285 NSDRIPFPYGSERPGHGPTFDRPPSPRSWTPQGVGGGDPRGFDASSGFTPRNRPVESGNH 344
+SD G TP GG +P A +G R
Sbjct: 213 HSD-----MGKLGSNPLAGLAALGLGGLATPANTGGLNPAALAALAGSQLRTSNTNRQQP 267
Query: 345 AAILTSTTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKP---GATEGVVMVS 401
AA + T E+ +P + + G+ + ++ IRQISGA + +++ + GAT+ + ++
Sbjct: 268 AA--NNQTHEMTVPNELIGCIIGKGGTKIAEIRQISGAMIRISNCEEREGGATDRTITIT 325
Query: 402 GTSDQMRAAQSLI 414
G D + AQ LI
Sbjct: 326 GNPDAVALAQYLI 338
Score = 42.7 bits (99), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 40/67 (59%), Gaps = 2/67 (2%)
Query: 137 RLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQ 196
+ V ++ IGC++G+GG ++E+R+ +GA IR+ ++ R G D + + GN +V
Sbjct: 275 EMTVPNELIGCIIGKGGTKIAEIRQISGAMIRISNCEE--REGGATDRTITITGNPDAVA 332
Query: 197 DALFHIT 203
A + I+
Sbjct: 333 LAQYLIS 339
Score = 40.0 bits (92), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 38/80 (47%), Gaps = 7/80 (8%)
Query: 129 EPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAPRCGSPHDEIVQV 188
+P + RL++ +++G ++G+ G IV R +GA I + GS + IV V
Sbjct: 13 DPSVTLTIRLIMQGKEVGSIIGKKGEIVKRFREESGAKINISD-------GSCPERIVTV 65
Query: 189 IGNYHSVQDALFHITSRLRE 208
G +S+ A I + E
Sbjct: 66 TGPTNSIFKAFTLICKKFEE 85
>gi|63115359|gb|AAY33858.1| KH domain-containing protein [Betula platyphylla]
Length = 166
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 42/96 (43%), Positives = 62/96 (64%), Gaps = 4/96 (4%)
Query: 137 RLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQ 196
RLLV + +IGCL+G+GG IV+EMRR T A+IR+ K+ P+ S DE+VQ+ G+ +
Sbjct: 9 RLLVPTSRIGCLIGKGGAIVTEMRRLTKANIRILSKENLPKVASEDDEMVQISGDLDVAK 68
Query: 197 DALFHITSRLRETIFPMKRPGPNNGHSYLPPFPEMP 232
DAL + +RLR +F R G + ++LP P +P
Sbjct: 69 DALMQVVTRLRANLF--DREGAVS--TFLPVLPYLP 100
>gi|255557235|ref|XP_002519648.1| Poly(rC)-binding protein, putative [Ricinus communis]
gi|223541065|gb|EEF42621.1| Poly(rC)-binding protein, putative [Ricinus communis]
Length = 462
Score = 88.2 bits (217), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 58/186 (31%), Positives = 93/186 (50%), Gaps = 31/186 (16%)
Query: 43 RMFYEEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISAR 102
+M +EE ++L + ++IGK G+ ++ +++T A+IK+ + +
Sbjct: 137 KMKDKEEC--RILVPSSQSANIIGKAGTTIKKLRSKTRATIKV--------------TPK 180
Query: 103 ENSEMRHSPAQD--------------AVMRVHSRIAEIGFEPGQAVVARLLVHSQQIGCL 148
+ S+ HS A D AV + +I E V RLLV + IGC+
Sbjct: 181 DASDPTHSCAMDFDNFIMSPDDLKSMAVEAILLLQGKINDEDDDTVSIRLLVPCKVIGCI 240
Query: 149 LGRGGHIVSEMRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRE 208
+G+ G I++E+RR T A IR+ K Q P+C DE+V+V+G SV+DAL I RLR+
Sbjct: 241 IGKSGSIINEIRRRTKADIRI-SKGQKPKCADSSDELVEVLGEVGSVRDALVQIVLRLRD 299
Query: 209 TIFPMK 214
K
Sbjct: 300 DALKEK 305
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 79/146 (54%), Gaps = 19/146 (13%)
Query: 47 EEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVI----SAR 102
+E V +++LC + +GS+IGK G ++ + + ET A +K+ D P +R++ I +
Sbjct: 36 DELVAYRILCPDEVIGSVIGKNGKVINSIRQETRAKVKVVDPFPGPNDRVITIYCYVKKK 95
Query: 103 ENSEM-----RHSP---AQDAVMRVHSRIA-------EIGFEPGQAVVARLLVHSQQIGC 147
E+ E+ H P AQDA++RVHS I+ + + R+LV S Q
Sbjct: 96 EDVELDDEFHDHQPFCAAQDALLRVHSAISNAVSSVLDSDRKMKDKEECRILVPSSQSAN 155
Query: 148 LLGRGGHIVSEMRRATGASIRVFPKD 173
++G+ G + ++R T A+I+V PKD
Sbjct: 156 IIGKAGTTIKKLRSKTRATIKVTPKD 181
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 48/69 (69%)
Query: 351 TTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATEGVVMVSGTSDQMRAA 410
+T+E+++P + V G+ +N+++IR+ISGA + ++D K + + +SGT +Q RAA
Sbjct: 392 STLEMLVPANAVGKVLGKGGANIANIRKISGAMIEISDAKSARGDRIAHISGTPEQKRAA 451
Query: 411 QSLIHAFIL 419
++LI AFI+
Sbjct: 452 ENLIQAFIM 460
>gi|383862493|ref|XP_003706718.1| PREDICTED: poly(rC)-binding protein 4-like isoform 1 [Megachile
rotundata]
Length = 466
Score = 87.8 bits (216), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 96/375 (25%), Positives = 159/375 (42%), Gaps = 64/375 (17%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMRH 109
+ +L+ +VGS+IGK G IV+ F+ E+GA I I+D ERIV ++ NS +
Sbjct: 18 LTIRLIMQGKEVGSIIGKKGEIVKRFREESGAKINISD--GSCPERIVTVTGPTNSIFKA 75
Query: 110 -----SPAQDAVMRVHSRIAEIGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATG 164
++ + H I G P + RL+V + Q G L+G+GG + E+R TG
Sbjct: 76 FTLICKKFEEWCSQFHD-IQSGGGVPRPPITLRLIVPASQCGSLIGKGGSKIKEIREVTG 134
Query: 165 ASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKRPGPNNGHSY 224
ASI+V + P + + V + G ++ ++HI + E+ P G +
Sbjct: 135 ASIQV-ASEMLP---NSTERAVTISGTSEAITQCIYHICCVMLES--------PPKGATI 182
Query: 225 LPPFPEMPPPPFRPRHNPASPGSYPSPVGPFHSMDRGMGPSQPFDHQAAFSHGMDPMVPP 284
P+RP+ P GP + Q + Q ++ VP
Sbjct: 183 ----------PYRPK---------PQVGGPLI-----LAGGQAYTIQGNYA------VPA 212
Query: 285 NSDRIPFPYGSERPGHGP--TFDRPPSPRSWTPQGVGGGDPRGFDASSGFTPRNRPVESG 342
+SD + G P TP GG +P A +G R
Sbjct: 213 HSDM-------GKLGSNPLAGLAALGLGGLATPANTGGLNPAALAALAGSQLRTSNTNRQ 265
Query: 343 NHAAILTSTTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKP---GATEGVVM 399
AA + T E+ +P + + G+ + ++ IRQISGA + +++ + GAT+ +
Sbjct: 266 QPAA--NNQTHEMTVPNELIGCIIGKGGTKIAEIRQISGAMIRISNCEEREGGATDRTIT 323
Query: 400 VSGTSDQMRAAQSLI 414
++G D + AQ LI
Sbjct: 324 ITGNPDAVALAQYLI 338
Score = 42.7 bits (99), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 40/67 (59%), Gaps = 2/67 (2%)
Query: 137 RLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQ 196
+ V ++ IGC++G+GG ++E+R+ +GA IR+ ++ R G D + + GN +V
Sbjct: 275 EMTVPNELIGCIIGKGGTKIAEIRQISGAMIRISNCEE--REGGATDRTITITGNPDAVA 332
Query: 197 DALFHIT 203
A + I+
Sbjct: 333 LAQYLIS 339
Score = 40.0 bits (92), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 38/80 (47%), Gaps = 7/80 (8%)
Query: 129 EPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAPRCGSPHDEIVQV 188
+P + RL++ +++G ++G+ G IV R +GA I + GS + IV V
Sbjct: 13 DPSVTLTIRLIMQGKEVGSIIGKKGEIVKRFREESGAKINISD-------GSCPERIVTV 65
Query: 189 IGNYHSVQDALFHITSRLRE 208
G +S+ A I + E
Sbjct: 66 TGPTNSIFKAFTLICKKFEE 85
>gi|12597878|gb|AAG60186.1|AC084763_6 putative nucleic acid binding protein [Oryza sativa Japonica Group]
gi|31433543|gb|AAP55041.1| KH domain-containing protein, putative, expressed [Oryza sativa
Japonica Group]
gi|125532979|gb|EAY79544.1| hypothetical protein OsI_34673 [Oryza sativa Indica Group]
gi|125575714|gb|EAZ16998.1| hypothetical protein OsJ_32483 [Oryza sativa Japonica Group]
gi|215769329|dbj|BAH01558.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 458
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 104/386 (26%), Positives = 163/386 (42%), Gaps = 68/386 (17%)
Query: 51 VFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMRHS 110
VF+L+ + KVGS+IG+ G +++ ET A +++ + + ERIV++S +E+ +
Sbjct: 57 VFRLVVPVLKVGSIIGRKGELIKRLVEETKAKVRVLEGPVGATERIVLVSGKEDPALELP 116
Query: 111 PAQDAVMRVHSRIAEI---GFEPGQAVV------ARLLVHSQQIGCLLGRGGHIVSEMRR 161
PA DA+MRV R++ I E QA ARLLV Q L+G+ G + ++
Sbjct: 117 PAMDALMRVFKRVSGITDGAAEGTQAATAPGVCAARLLVPGAQAINLIGKQGASIKAIQE 176
Query: 162 ATGASIRVFPKDQAPR--CGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKRPGPN 219
TGA+IRV D+ R + IV++ G V AL +++ LR+ +
Sbjct: 177 GTGATIRVISIDERERPFYVIEDERIVEIQGETEKVLKALQAVSNHLRKFLV-------- 228
Query: 220 NGHSYLPPFPEMPPPPFRPRHNPA-SPGSYPSPVGPFHSMDRGMGPSQPFDHQAAFSHGM 278
HS LP F + + R A + S+PS V +QP
Sbjct: 229 -DHSVLPLFEKTNATVTQDRSTDAWTDISHPSIVSA--------QINQP----------- 268
Query: 279 DPMVPPNSDRIPFPYGSERPGHGPTF--DRPPSPRSWTPQGVG--GGDPRGFDASSGFTP 334
PP D P + P F P + GV G DP + T
Sbjct: 269 ----PPVVDEYILPMKRD-----PLFLEREPLIDHNIHRSGVSLYGRDP------ALSTL 313
Query: 335 RNRPVESGNHAAILTSTTIEVVIPQLYMAHVYGEN-----NSNLSHIRQISGANVVVNDP 389
R SG H + + + + Y E+ +N+++IR SGA V + +
Sbjct: 314 RT----SGIHGGGPGGPLLSQITQTMQIPLTYAEDIIGVKGANIAYIRANSGAVVTIQES 369
Query: 390 KPGATEGVVMVSGTSDQMRAAQSLIH 415
+ V + GTS Q++AA LI
Sbjct: 370 LGSPDDITVEMKGTSSQVQAAYQLIQ 395
>gi|390458234|ref|XP_003732080.1| PREDICTED: poly(rC)-binding protein 1-like [Callithrix jacchus]
Length = 349
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 94/372 (25%), Positives = 162/372 (43%), Gaps = 45/372 (12%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMR- 108
+ +LL H +VGS+IGK G V+ + E+GA I I++ + ERI+ ++ N+ +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISE--GNCPERIITLTGPTNAIFKA 71
Query: 109 HSPAQDAVMR-VHSRIAEIGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASI 167
+ D + ++S + V RL+V + Q G L+G+GG + E+R++TGA +
Sbjct: 72 FAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRKSTGAQV 131
Query: 168 RVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKRPGPNNGHSYLPP 227
+V D P + ++ + + G SV + + I + ETI + +
Sbjct: 132 QV-AGDMLP---NSTEQAITIAGMPQSVTECVKQICLVMLETI-------SQSPQGRVMT 180
Query: 228 FPEMPPPPFRPRHNPASPGSYPSPVGPFHSMDRGMGPSQPFD-HQAAFSHGMDPMVPPNS 286
P P P P Y + G H+ GP P D + H + P+ N
Sbjct: 181 IPYQPMPASSPVICAGGQDRYSNTAGYPHATHDLEGP--PLDAYSIQGQHTISPLHLANL 238
Query: 287 DRIPFPYGSERPGHGPTFDRPPSPRSWTPQGVGGGDPRGFDASSGFTPRNRPVESGNHAA 346
+++ HG T G G D N P G A+
Sbjct: 239 NQVARQQSHFAMMHGGT-------------GFAGIDS------------NSPEVKGYWAS 273
Query: 347 I--LTSTTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATEGVVMVSGTS 404
+ T TT E+ IP + + G +N++ IRQ+SGA + + +P G++ V ++G++
Sbjct: 274 LDASTQTTHELTIPNNLIGCIIGRQGTNINEIRQMSGAQIKIANPVEGSSGRQVTITGSA 333
Query: 405 DQMRAAQSLIHA 416
+ AQ LI+A
Sbjct: 334 ASISLAQYLINA 345
>gi|357157425|ref|XP_003577794.1| PREDICTED: KH domain-containing protein At4g18375-like
[Brachypodium distachyon]
Length = 527
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/172 (31%), Positives = 89/172 (51%), Gaps = 12/172 (6%)
Query: 49 EVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMR 108
E VF++L + KVG++IG+ G ++ E+ A IKI D P ER V+ISA++ +
Sbjct: 125 ESVFRVLVPVQKVGAVIGRKGEFIKKMCEESRARIKILDGPPGVPERAVMISAKDEPDAL 184
Query: 109 HSPAQDAVMRVHSRIAEIGFE---------PGQAVVARLLVHSQQIGCLLGRGGHIVSEM 159
SPA D ++RVH RI + G + G RLLV + Q G L+G+ G + +
Sbjct: 185 VSPAVDGLLRVHKRITD-GLDSETDQPQRGAGPVGPTRLLVPASQAGSLIGKQGATIKSI 243
Query: 160 RRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIF 211
+ A+ ++R+ + P D +V++ G V A+ I S LR+ +
Sbjct: 244 QDASKCALRIL--ENVPPVALNDDRVVEIQGEPLDVHKAVELIASHLRKFLV 293
>gi|357140452|ref|XP_003571781.1| PREDICTED: uncharacterized protein LOC100836040 [Brachypodium
distachyon]
Length = 587
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 101/213 (47%), Gaps = 16/213 (7%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMRH 109
VF++L KVG++IG+ G VR ET AS+++ + ER+V+I A+E +
Sbjct: 62 TVFRMLISSTKVGAIIGQKGERVRRLCEETKASVRVIGGHFAAAERVVLIFAKEQPDEPI 121
Query: 110 SPAQDAVMRVHSRIAE---IGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGAS 166
PA DA++RV+ I +G AVV R+L+ S+Q L+G G +++ + A+
Sbjct: 122 PPAMDALLRVYQNIVNDDGLGMGSDSAVVTRILIPSEQALNLIGEQGSMINLIEEASQTD 181
Query: 167 IRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKRPGPNNGHSYLP 226
IRV + P D IV++ G V+ AL + LR+ + S +P
Sbjct: 182 IRVLDCNLPP-AALDEDRIVEIWGQPTRVRKALELVARHLRKYLV---------DRSVIP 231
Query: 227 PFPEMPPPPFRPRHNPASPGSYPS-PVGPFHSM 258
F P P H SP Y P GP ++
Sbjct: 232 LFD--PHVPMTTSHVDTSPCYYSDHPEGPLQAI 262
>gi|363808250|ref|NP_001242748.1| uncharacterized protein LOC100819415 [Glycine max]
gi|255637181|gb|ACU18921.1| unknown [Glycine max]
Length = 318
Score = 84.7 bits (208), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 95/334 (28%), Positives = 148/334 (44%), Gaps = 40/334 (11%)
Query: 98 VISARENSEMRHSPAQDAVMRVHSRIAEIGFEP-------GQAVVARLLVHSQQIGCLLG 150
++SA+E + PA D ++RVH ++ + P G+ VV RLLV Q G L+G
Sbjct: 1 MVSAKEEPDCSIPPAVDVLLRVHKQVVNVDPHPADSASGAGRPVVTRLLVADTQAGSLIG 60
Query: 151 RGGHIVSEMRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETI 210
+ G + + ATG +IR+ + P D +V++ G V A+ + LR+
Sbjct: 61 KQGSTIKSFQDATGCNIRILGSEHLPVFALRDDSVVEIQGESSGVHKAVELVAIHLRK-- 118
Query: 211 FPMKRPGPNNGHSYLPPF-PEMPPPPFRPRHNPASPGSYPSPVGPFHSMDRGMGPSQPFD 269
F + R S + F +M P R N P GP H + GP Q F
Sbjct: 119 FLVDR-------SIVVVFETQMQRPDVRVNQN--------VPPGPPH---QPWGPPQGF- 159
Query: 270 HQAAFSHGMDPMVPPNSDRIPFPYGSERPGHGPTFDRPPSPRSWTPQGVGGGDPRGFDAS 329
QA V P + + P + P D PP + QG R DAS
Sbjct: 160 -QAPGPGSGGGPVFPPNPQY-MPPSHNYDNYYPPADLPPMDKHLH-QGPAPAYVR--DAS 214
Query: 330 SGF-TPRNRPVESGNHAAILTSTTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVND 388
G + +P +S ++T T + IP Y V G + +N+S+IR+ SGA++ + +
Sbjct: 215 MGIHSSSAQPQQS-----VVTKVTQHMQIPLSYADAVIGASGANISYIRRASGASITIQE 269
Query: 389 PKPGATEGVVMVSGTSDQMRAAQSLIHAFILCGV 422
+ E V +SGT+ Q++AAQ L+ F G+
Sbjct: 270 TRGVPGEMTVEISGTASQIQAAQQLVQVFHFKGL 303
Score = 40.8 bits (94), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 34/56 (60%), Gaps = 5/56 (8%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENS 105
VV +LL + GSLIGK GS +++FQ+ TG +I+I E + V + R++S
Sbjct: 44 VVTRLLVADTQAGSLIGKQGSTIKSFQDATGCNIRIL-----GSEHLPVFALRDDS 94
>gi|357479529|ref|XP_003610050.1| Poly(rC)-binding protein [Medicago truncatula]
gi|355511105|gb|AES92247.1| Poly(rC)-binding protein [Medicago truncatula]
Length = 431
Score = 84.7 bits (208), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 85/166 (51%), Gaps = 8/166 (4%)
Query: 51 VFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMRHS 110
VF+L+ + KVG +IG+ G +++ ET A I++ D + +RIV+IS +E+ E S
Sbjct: 45 VFRLIVPVVKVGIIIGRKGELIKKTCEETHARIRVLDAPVGTPDRIVLISGKEDLEAPLS 104
Query: 111 PAQDAVMRVHSRIAEIGFEPGQAVVA--------RLLVHSQQIGCLLGRGGHIVSEMRRA 162
PA DA++R+ R++ + A RLLV S Q L+G+ G + ++
Sbjct: 105 PAMDAILRIFKRVSGLSETDNNNTAAAGVALCSIRLLVASTQAINLIGKQGSSIKAIQEN 164
Query: 163 TGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRE 208
TGA IRV D+ P + I+ + G V AL + LR+
Sbjct: 165 TGAVIRVLSGDELPSYAGADERIIDLQGETLKVLKALEAVVGHLRK 210
Score = 42.4 bits (98), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
Query: 345 AAILTSTTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATEGVVMVSGTS 404
A+I+T+ + IP Y + G +N+ +IR+ SGA + V + + E +V + GTS
Sbjct: 303 ASIVTTVIQTMQIPLSYAEDIIGIQGTNIDYIRRTSGAILTVQESRV-PDEIIVEIKGTS 361
Query: 405 DQMRAAQSLIHAFI 418
Q++ AQ LI I
Sbjct: 362 TQVQTAQQLIQEVI 375
>gi|328709625|ref|XP_001951678.2| PREDICTED: poly(rC)-binding protein 3-like isoform 1 [Acyrthosiphon
pisum]
Length = 411
Score = 84.3 bits (207), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 105/408 (25%), Positives = 170/408 (41%), Gaps = 74/408 (18%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMRH 109
+ +L+ +VGS+IGK G IV+ F+ E+GA I I+D ERIV IS ++E +
Sbjct: 13 LTLRLIMQGKEVGSIIGKKGEIVKRFREESGAKINISD--GSCPERIVTISG--STEAIY 68
Query: 110 SPAQDAVMRVHSRIAEIGFEPGQAVVA------RLLVHSQQIGCLLGRGGHIVSEMRRAT 163
+V I + G + RL+V + Q G L+G+GG+ + E+R AT
Sbjct: 69 KAFSLICTKVEEFIEMQNGKTGATAIGKCGMTLRLIVPASQCGSLIGKGGNKIKEIREAT 128
Query: 164 GASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKRPGPNNGHS 223
GA I+V D P+ + V + G S+ +FHI + + E+ P G +
Sbjct: 129 GAQIQV-ASDVLPQ---STERAVTLTGTRDSITQCIFHICAVMVES--------PPKGVT 176
Query: 224 YLPPF---PEMPPPPFRPRHNPASPGSYPSPVG-PFHSMDRGMGP-SQPFDHQAAFSHGM 278
P+ P+M P + S S G +M G GP + P
Sbjct: 177 I--PYRAKPQMGAPVILAGGQAFTLASAGSAAGCDVGTMMVGGGPYNAPM---------- 224
Query: 279 DPMVPPNSDRIPFPYGSERPGHGPTFDRPPSPRSWTPQGVGG--GDPRGFDASSGFTPRN 336
MVPP+ P + G D P ++ P +G G+P A+ G
Sbjct: 225 -LMVPPS------PGAAASLGLIDPLDYPLLKNAFGPSQLGKLTGNPLAGLAALGLGSLG 277
Query: 337 RPVESGNHAAILT----------------------STTIEVVIPQLYMAHVYGENNSNLS 374
P S N AA+ T E+ +P + + G+ + ++
Sbjct: 278 GPANSFNPAALAALAGSQLRSNGSGANINSRSGGGQQTHEMTVPNDLIGCIIGKGGTKIA 337
Query: 375 HIRQISGANVVVNDPK----PGATEGVVMVSGTSDQMRAAQSLIHAFI 418
IRQISGA + +++ + +T+ + ++G D + AQ LI+ I
Sbjct: 338 EIRQISGAMIRISNCEDREGSASTDRTITITGNPDSVALAQYLINMRI 385
Score = 42.4 bits (98), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 43/82 (52%), Gaps = 3/82 (3%)
Query: 137 RLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAPRCGSPH-DEIVQVIGNYHSV 195
+ V + IGC++G+GG ++E+R+ +GA IR+ + R GS D + + GN SV
Sbjct: 317 EMTVPNDLIGCIIGKGGTKIAEIRQISGAMIRI--SNCEDREGSASTDRTITITGNPDSV 374
Query: 196 QDALFHITSRLRETIFPMKRPG 217
A + I R+ + PG
Sbjct: 375 ALAQYLINMRISMETAGLALPG 396
>gi|449524744|ref|XP_004169381.1| PREDICTED: poly(rC)-binding protein 3-like [Cucumis sativus]
Length = 224
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 46/126 (36%), Positives = 76/126 (60%), Gaps = 4/126 (3%)
Query: 49 EVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMR 108
+ VF+L+ + KVGS+IG+ G +++ ET A I++ D + +R+V+IS +E E
Sbjct: 80 DCVFRLIVPVVKVGSIIGRKGDLIKKMCEETRARIRVLDGAVGTPDRVVLISGKEELESP 139
Query: 109 HSPAQDAVMRVHSRIAEIGFEPGQAVVA----RLLVHSQQIGCLLGRGGHIVSEMRRATG 164
SPA DAV+RV R++ + +A + RLLV S Q L+G+ G ++ ++ +TG
Sbjct: 140 LSPAMDAVIRVFKRVSGLSENEDEAKASFCSIRLLVASTQAINLIGKQGSLIKSIQESTG 199
Query: 165 ASIRVF 170
AS+RV
Sbjct: 200 ASVRVL 205
>gi|388502730|gb|AFK39431.1| unknown [Lotus japonicus]
Length = 123
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 42/83 (50%), Positives = 57/83 (68%)
Query: 342 GNHAAILTSTTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATEGVVMVS 401
GN A +T+TT+E+V+ + + VYGE+ N+ IRQISGA+V V DP G ++G V++S
Sbjct: 41 GNMLATVTNTTVEIVVSEHVFSSVYGEDGGNVDRIRQISGASVTVYDPSAGTSQGKVVIS 100
Query: 402 GTSDQMRAAQSLIHAFILCGVTS 424
GT DQ AAQSL+ AFI G S
Sbjct: 101 GTPDQTFAAQSLLQAFIQSGQVS 123
>gi|108709930|gb|ABF97725.1| KH domain containing protein, expressed [Oryza sativa Japonica
Group]
Length = 389
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/170 (31%), Positives = 89/170 (52%), Gaps = 10/170 (5%)
Query: 49 EVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMR 108
E VF++L KVG++IG+ G ++ E+ A IKI D P ER V+ISA++ +
Sbjct: 107 ESVFRILIPAQKVGAIIGRKGEFIKKMCEESKARIKILDGPPGVPERTVMISAKDEPDAP 166
Query: 109 HSPAQDAVMRVHSRIAE----IGFEPGQAVV----ARLLVHSQQIGCLLGRGGHIVSEMR 160
SPA D + RV+ RI + +P + + RLLV + Q G L+G+ G + ++
Sbjct: 167 ISPAMDGLFRVYKRITDGSDGDSGQPERNISNVGPTRLLVPASQAGSLIGKQGATIKSIQ 226
Query: 161 RATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETI 210
++ + +R+ + P D +V++ G VQ AL I S LR+ +
Sbjct: 227 DSSKSIVRIV--ETLPLVALNDDRVVEIQGEPVGVQKALESIASHLRKFL 274
>gi|189234912|ref|XP_969611.2| PREDICTED: similar to AGAP004942-PA [Tribolium castaneum]
Length = 446
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 95/385 (24%), Positives = 160/385 (41%), Gaps = 87/385 (22%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMRH 109
+ +L+ +VGS+IGK G IV+ F+ E+GA I I+D ERIV ++ N
Sbjct: 17 LTIRLIMQGKEVGSIIGKKGEIVKRFREESGAKINISD--GSCPERIVTVTGSTN----- 69
Query: 110 SPAQDAVMRVHSRIAEIGFEPGQAV------------VARLLVHSQQIGCLLGRGGHIVS 157
A+ + + I + FE Q + RL+V + Q G L+G+GG +
Sbjct: 70 -----AIFKAFTLICK-KFEEFQDINSGGSGVPRPPITLRLIVPASQCGSLIGKGGSKIK 123
Query: 158 EMRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKRPG 217
E+R TGASI+V + P + + V + G ++ ++HI + + E+
Sbjct: 124 EIREVTGASIQV-ASEMLP---NSTERAVTISGTGEAITQCIYHICTVMLES-------- 171
Query: 218 PNNGHSYLPPFPEMPPPPFRPRHNPASPGSYPSPVGPFHSMDRGMGPSQPFDHQAAFSHG 277
P G + P+RP+ P GP + Q + Q ++
Sbjct: 172 PPKGATI----------PYRPK---------PQVGGPVI-----LAGGQAYTIQGNYA-- 205
Query: 278 MDPMVPPNSDRIPFPYGSERPGHGP-TFDRPPSPRSWTPQGVGGGDPRGFDASSGF---T 333
VP ++D G P P GG +P A +G T
Sbjct: 206 ----VPAHTDMSAL-------GKSPLAGLAALGLGGLAPTNTGGLNPAALAALAGSQLRT 254
Query: 334 PRNRPVESGNHAAILTSTTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVV---NDPK 390
+R ++ N T E+ +P + + G+ + ++ IRQISGA + + +D +
Sbjct: 255 SNSRNQQNSNQQ------THEMTVPNELIGCIIGKGGTKIAEIRQISGAMIRISNCDDRE 308
Query: 391 PGATEGVVMVSGTSDQMRAAQSLIH 415
G T+ + +SG D + AQ LI+
Sbjct: 309 SGVTDRTITISGNPDAVALAQYLIN 333
>gi|376338927|gb|AFB33992.1| hypothetical protein CL1760Contig1_01, partial [Larix decidua]
gi|376338929|gb|AFB33993.1| hypothetical protein CL1760Contig1_01, partial [Larix decidua]
gi|376338931|gb|AFB33994.1| hypothetical protein CL1760Contig1_01, partial [Larix decidua]
gi|376338933|gb|AFB33995.1| hypothetical protein CL1760Contig1_01, partial [Larix decidua]
Length = 86
Score = 83.6 bits (205), Expect = 2e-13, Method: Composition-based stats.
Identities = 37/77 (48%), Positives = 53/77 (68%)
Query: 134 VVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYH 193
+ +LL+ S Q GCLLG+GG I+SEMR+ T A+IR+ PK+ P C DE+VQ++G+
Sbjct: 3 ITTKLLIPSNQTGCLLGKGGAIISEMRKQTRANIRILPKEDLPPCALDSDEMVQIVGDIR 62
Query: 194 SVQDALFHITSRLRETI 210
+ + AL +TSRLR I
Sbjct: 63 AARAALVQVTSRLRSFI 79
>gi|307199010|gb|EFN79734.1| Poly(rC)-binding protein 3 [Harpegnathos saltator]
Length = 469
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 95/384 (24%), Positives = 157/384 (40%), Gaps = 69/384 (17%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENS---- 105
+ +L+ +VGS+IGK G IV+ F+ E+GA I I+D ERIV ++ NS
Sbjct: 15 LTIRLIMQGKEVGSIIGKKGEIVKRFREESGAKINISD--GSCPERIVTVTGPTNSIFKA 72
Query: 106 --------EMRHSPAQDAVMRVHSRIAEIGFEPGQAVVARLLVHSQQIGCLLGRGGHIVS 157
E S D + P + RL+V + Q G L+G+GG +
Sbjct: 73 FTLICKKFEEWCSQFHDIQGGGAGGGGGVSRPP---ITLRLIVPASQCGSLIGKGGSKIK 129
Query: 158 EMRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKRPG 217
E+R TGASI+V + P + + V + G ++ ++HI + E+
Sbjct: 130 EIREVTGASIQV-ASEMLP---NSTERAVTISGTSEAITQCIYHICCVMLES-------- 177
Query: 218 PNNGHSYLPPFPEMPPPPFRPRHNPASPGSYPSPVGPFHSMDRGMGPSQPFDHQAAFSHG 277
P G + P+RP+ P GP + Q + Q ++
Sbjct: 178 PPKGATI----------PYRPK---------PQVGGPVI-----LAGGQAYTIQGNYA-- 211
Query: 278 MDPMVPPNSDRIPFPYGSERPGHGPTFDRPPSPRSWTPQGVGGGDPRGFDASSGFTPRNR 337
VP +SD G + TP GG +P A +G R
Sbjct: 212 ----VPAHSD-----MGKLGSNPLASLAALGLGGLATPANTGGLNPAALAALAGSQLRTS 262
Query: 338 PVESGNHAAILTSTTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKP---GAT 394
AA + T E+ +P + + G+ + ++ IRQISGA + +++ + GAT
Sbjct: 263 NTNRQQPAA--NNQTHEMTVPNELIGCIIGKGGTKIAEIRQISGAMIRISNCEEREGGAT 320
Query: 395 EGVVMVSGTSDQMRAAQSLIHAFI 418
+ + ++G D + AQ LI+ +
Sbjct: 321 DRTITITGNPDAVALAQYLINMSV 344
Score = 40.0 bits (92), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 38/80 (47%), Gaps = 7/80 (8%)
Query: 129 EPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAPRCGSPHDEIVQV 188
+P + RL++ +++G ++G+ G IV R +GA I + GS + IV V
Sbjct: 10 DPSVTLTIRLIMQGKEVGSIIGKKGEIVKRFREESGAKINISD-------GSCPERIVTV 62
Query: 189 IGNYHSVQDALFHITSRLRE 208
G +S+ A I + E
Sbjct: 63 TGPTNSIFKAFTLICKKFEE 82
>gi|326500580|dbj|BAK06379.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 471
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 84/166 (50%), Gaps = 9/166 (5%)
Query: 51 VFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMRHS 110
VF+L+ DKVG LIG+ G +++ T A +++ D RIV+ISA E ++ +
Sbjct: 95 VFRLVVAGDKVGGLIGRRGEVIKRLCEVTRARVRVLDPTDGVSSRIVLISATEETQAELA 154
Query: 111 PAQDAVMRVHSRIAEI-GFEPG--------QAVVARLLVHSQQIGCLLGRGGHIVSEMRR 161
PA DA +R+ + +I G P + ARLLV Q L+G+ G + M+
Sbjct: 155 PAMDAAVRIFKHVNDIEGINPDFTLPVSGPEICSARLLVPKAQGRHLIGKQGTTIQLMQE 214
Query: 162 ATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLR 207
+TG +IR+ KD+ + IV++ G V +AL + LR
Sbjct: 215 STGTTIRIIDKDELLSNQMVEERIVEIRGASLKVLNALKSVLGLLR 260
Score = 40.8 bits (94), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 38/74 (51%)
Query: 346 AILTSTTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATEGVVMVSGTSD 405
++++ T + IP + G ++HIR +SGA VV+ + E +V + GTS
Sbjct: 342 SLISKITQTMRIPLPQAEEIIGVRGQTIAHIRSVSGAMVVLEETGNYLDEVLVSIEGTSS 401
Query: 406 QMRAAQSLIHAFIL 419
Q++ A LI +L
Sbjct: 402 QVQTAHQLIQEVLL 415
>gi|328709627|ref|XP_003244018.1| PREDICTED: poly(rC)-binding protein 3-like isoform 2 [Acyrthosiphon
pisum]
Length = 525
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 104/405 (25%), Positives = 169/405 (41%), Gaps = 74/405 (18%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMRH 109
+ +L+ +VGS+IGK G IV+ F+ E+GA I I+D ERIV IS ++E +
Sbjct: 13 LTLRLIMQGKEVGSIIGKKGEIVKRFREESGAKINISD--GSCPERIVTISG--STEAIY 68
Query: 110 SPAQDAVMRVHSRIAEIGFEPGQAVVA------RLLVHSQQIGCLLGRGGHIVSEMRRAT 163
+V I + G + RL+V + Q G L+G+GG+ + E+R AT
Sbjct: 69 KAFSLICTKVEEFIEMQNGKTGATAIGKCGMTLRLIVPASQCGSLIGKGGNKIKEIREAT 128
Query: 164 GASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKRPGPNNGHS 223
GA I+V D P+ + V + G S+ +FHI + + E+ P G +
Sbjct: 129 GAQIQV-ASDVLPQ---STERAVTLTGTRDSITQCIFHICAVMVES--------PPKGVT 176
Query: 224 YLPPF---PEMPPPPFRPRHNPASPGSYPSPVG-PFHSMDRGMGP-SQPFDHQAAFSHGM 278
P+ P+M P + S S G +M G GP + P
Sbjct: 177 I--PYRAKPQMGAPVILAGGQAFTLASAGSAAGCDVGTMMVGGGPYNAPM---------- 224
Query: 279 DPMVPPNSDRIPFPYGSERPGHGPTFDRPPSPRSWTPQGVGG--GDPRGFDASSGFTPRN 336
MVPP+ P + G D P ++ P +G G+P A+ G
Sbjct: 225 -LMVPPS------PGAAASLGLIDPLDYPLLKNAFGPSQLGKLTGNPLAGLAALGLGSLG 277
Query: 337 RPVESGNHAAILT----------------------STTIEVVIPQLYMAHVYGENNSNLS 374
P S N AA+ T E+ +P + + G+ + ++
Sbjct: 278 GPANSFNPAALAALAGSQLRSNGSGANINSRSGGGQQTHEMTVPNDLIGCIIGKGGTKIA 337
Query: 375 HIRQISGANVVVNDPK----PGATEGVVMVSGTSDQMRAAQSLIH 415
IRQISGA + +++ + +T+ + ++G D + AQ LI+
Sbjct: 338 EIRQISGAMIRISNCEDREGSASTDRTITITGNPDSVALAQYLIN 382
>gi|74007267|ref|XP_548937.2| PREDICTED: poly(rC)-binding protein 1-like [Canis lupus familiaris]
Length = 362
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 97/377 (25%), Positives = 163/377 (43%), Gaps = 49/377 (12%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMRH 109
+ +LL H +VGS+IGK G + F+ E+GA I I++ + ERI+ ++ N+ +
Sbjct: 14 LTIRLLMHRKEVGSIIGKKGESPKRFRKESGARINISE--GNCPERIITLTGPTNAIFKA 71
Query: 110 SPAQDAVMRVHSRIAEIGFEPGQAVVA-------RLLVHSQQIGCLLGRGGHIVSEMRRA 162
VM + +I + A RL+V + Q G L+G+GG + E+R +
Sbjct: 72 -----FVMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPAYQCGSLIGKGGCKIKEIRES 126
Query: 163 TGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKRPGPNNGH 222
TGA ++V D P + + + + G SV + + I + ET+
Sbjct: 127 TGAQVQV-AGDMLP---NSTERAITIAGVPQSVTECVKQICLVMLETLSQ---------- 172
Query: 223 SYLPPFPEMPPPPFRPRHNPASPGSYPSPVGPFHSMDRGMGPSQPFDHQAAFSHGMDPMV 282
P + P++P PAS SPV DR G + + H A + H +
Sbjct: 173 ---SPQGRVMTIPYQPM--PAS-----SPVICAGGQDR-WGYAAGYPHAAGYPHDTHYLE 221
Query: 283 PPNSDRIPFP-YGSERPGHGPTFDRPPSPRSWTPQGVGGGDPRGFDASSGFTPRNRPVES 341
P D + P ++ +S GG G D+ N P
Sbjct: 222 GPPLDAYSIQGQHTVSPLDLAKLNQVARQQSHFAMMHGGTGFAGIDS-------NSPEVK 274
Query: 342 GNHAAI--LTSTTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATEGVVM 399
G A++ T TT E IP + + G +N++ IRQ+SGA + + +P G++ V
Sbjct: 275 GYWASLDASTQTTHEFTIPNNLIGCIIGRQGANINEIRQMSGAQIKIANPVEGSSGRQVT 334
Query: 400 VSGTSDQMRAAQSLIHA 416
++G++ + AQ LI+A
Sbjct: 335 ITGSAASISLAQYLINA 351
>gi|296189557|ref|XP_002742821.1| PREDICTED: poly(rC)-binding protein 1 isoform 1 [Callithrix
jacchus]
Length = 375
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 97/377 (25%), Positives = 164/377 (43%), Gaps = 56/377 (14%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMR- 108
+ +LL H +VGS+IGK G V+ + E+GA IKI + + ERI+ ++ N+ +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKRIRKESGARIKILE--GNCPERIITLTGPTNAIFKA 71
Query: 109 -----HSPAQDAVMRVHSRIAEIGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRAT 163
+ +D ++S + + + V RL+V + Q G L+G+GG + E+R++T
Sbjct: 72 FAMIIYKLEED----INSSMTK-STAASRLVTLRLVVPATQCGSLIGKGGCKIKEIRKST 126
Query: 164 GASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKRPGPNNGHS 223
GA ++V D P + + + + G SV + I + ET+ P
Sbjct: 127 GAQVQV-AGDMLP---NSTERAITIAGVPQSVTKCVKQICLVMLETLS--HSPQGKVKTI 180
Query: 224 YLPPFPEMPPPPFRPRHNPASPGS-YPSPVGPFHSMDRGMGPSQPFDHQAAFS-HGMDPM 281
P P P + S + YP H+ GP P D A+S G +
Sbjct: 181 LYQPMPSRSPVTCAGGQDRCSDAAGYP------HATHDLEGP--PLD---AYSIQGQHTI 229
Query: 282 VPPNSDRIPFPYGSERPGHGPTFDRPPSPRSWTPQGVGGGDPRGFDASSGFTPRNRPVES 341
P N + ++ +S GG G D+SS P
Sbjct: 230 SPLNLAK---------------LNQVARQQSHFAMMHGGTGFAGIDSSS-------PEVK 267
Query: 342 GNHAAILTSTTI--EVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATEGVVM 399
G A++ ST I E+ IP + + G +N++ IRQ+SGA + + +P G++ V
Sbjct: 268 GYWASLDASTQITHELTIPNNLIGCIIGRQGTNINEIRQMSGAQIKIANPVEGSSGRQVT 327
Query: 400 VSGTSDQMRAAQSLIHA 416
++G++ + AQ LI A
Sbjct: 328 ITGSAASISLAQYLIKA 344
>gi|291237680|ref|XP_002738761.1| PREDICTED: poly(rC) binding protein 2-like [Saccoglossus
kowalevskii]
Length = 409
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 90/379 (23%), Positives = 149/379 (39%), Gaps = 84/379 (22%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENS---- 105
+ +L+ +VGS+IGKGG ++ F+ ++GA I I+D ERIV ++ +
Sbjct: 19 LTIRLIMQGKEVGSIIGKGGETIKKFREQSGARINISD--SSCAERIVTVTGSTEAINNA 76
Query: 106 -EMRHSPAQDAVMRVHSRIAEIGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATG 164
EM ++ V + + P V RL+V + Q G L+G+GG + E+R TG
Sbjct: 77 FEMITKKFEEDVSNNMANSST----PKPPVTLRLVVPASQCGSLIGKGGSKIKEIRENTG 132
Query: 165 ASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRET-----IFPMKRPGPN 219
AS++V + V + G ++ ++ I + E+ P RP P
Sbjct: 133 ASVQV----AGDMLHQSTERAVTISGTPEAITKCVYQICCVMLESPPKGATIPY-RPKPT 187
Query: 220 NGHSYLPPFPEMPPPPFRPRHNPASPGSYPSPVGPFHSMDRGMGPSQPFDHQAAFSHGMD 279
N + P + A G+Y P F + H H
Sbjct: 188 NATATHPAY--------------AVHGNYAVPYPDFMKL-----------HHLTMQH--- 219
Query: 280 PMVPPNSDRIPFPYGSERPGHGPTFDRPPSPRSWTPQGVGGGDPRGFDASSGFTPRNRPV 339
PF PG P +TP + G AS
Sbjct: 220 ---------TPF-----LPGQTP----------FTPTALNMGYGVANAAS---------- 245
Query: 340 ESGNHAAILTSTTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATEGVVM 399
+G A T E++IP + V G + ++ IRQISGA + + + + G+ + V
Sbjct: 246 -AGTQVATTGQQTYEIMIPNDLIGCVIGRGGAKINEIRQISGATIKIANSQEGSNDRSVT 304
Query: 400 VSGTSDQMRAAQSLIHAFI 418
+SGT + + A LI++ +
Sbjct: 305 ISGTVEAINLAHFLINSSL 323
Score = 44.7 bits (104), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 40/81 (49%), Gaps = 7/81 (8%)
Query: 130 PGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAPRCGSPHDEIVQVI 189
P + RL++ +++G ++G+GG + + R +GA I + A R IV V
Sbjct: 15 PAVTLTIRLIMQGKEVGSIIGKGGETIKKFREQSGARINISDSSCAER-------IVTVT 67
Query: 190 GNYHSVQDALFHITSRLRETI 210
G+ ++ +A IT + E +
Sbjct: 68 GSTEAINNAFEMITKKFEEDV 88
Score = 41.6 bits (96), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 39/71 (54%), Gaps = 5/71 (7%)
Query: 137 RLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQ 196
+++ + IGC++GRGG ++E+R+ +GA+I++ + +D V + G ++
Sbjct: 259 EIMIPNDLIGCVIGRGGAKINEIRQISGATIKIANSQEG-----SNDRSVTISGTVEAIN 313
Query: 197 DALFHITSRLR 207
A F I S L
Sbjct: 314 LAHFLINSSLE 324
Score = 40.4 bits (93), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 48/101 (47%), Gaps = 10/101 (9%)
Query: 1 MVVQGNPYPPAAEPFHQRGYAPGYH-SRGYSSGPGHETVGGRNRMFYEEEVVFKLLCHLD 59
+ +Q P+ P PF GY + S+G T G + ++++ D
Sbjct: 215 LTMQHTPFLPGQTPFTPTALNMGYGVANAASAGTQVATTGQQ---------TYEIMIPND 265
Query: 60 KVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVIS 100
+G +IG+GG+ + + +GA+IKIA+ S +R V IS
Sbjct: 266 LIGCVIGRGGAKINEIRQISGATIKIANSQEGSNDRSVTIS 306
>gi|403286483|ref|XP_003934516.1| PREDICTED: poly(rC)-binding protein 1-like isoform 1 [Saimiri
boliviensis boliviensis]
gi|403286485|ref|XP_003934517.1| PREDICTED: poly(rC)-binding protein 1-like isoform 2 [Saimiri
boliviensis boliviensis]
Length = 376
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 99/378 (26%), Positives = 165/378 (43%), Gaps = 57/378 (15%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISA------RE 103
+ +LL H +VGS+IGK V+ + E+GA I++ + ERI+ ++ +
Sbjct: 14 LTIRLLMHGKEVGSIIGKNEESVKRIREESGARFSISE--GNCPERIITLTGPTCAIFKA 71
Query: 104 NSEMRHSPAQDAVMRVHSRIAEIGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRAT 163
+ M + +D ++S + V RL+V + Q G L+G+GG + E+R +T
Sbjct: 72 FAMMINKLEED----INSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIREST 127
Query: 164 GASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKRPGPNNGHS 223
GA ++V D P + ++ + V SV + + I + ET
Sbjct: 128 GAQVQV-SGDMLP---NSTEQAITVAVVPQSVTECVQQICLVMLET-------------- 169
Query: 224 YLPPFPE--MPPPPFRPRHNPASPGSYPSPVGPFHSMDRGMGPSQPFDHQAAFSHGM-DP 280
LP P+ + P P++P PAS SPV DRG A + H D
Sbjct: 170 -LPQCPQGRVMPIPYQPM--PAS-----SPVTCAGGQDRG-------SDAAGYPHATRDL 214
Query: 281 MVPPNSDRIPFPYGSERPGHGPTFDRPPSPRSWTPQGVGGGDPRGFDASSGFTPRNRPVE 340
VPP + P H ++ +S GG G ++SS P
Sbjct: 215 GVPPLDACSTQGQHTISPLHLAKLNQVARQQSHIAMLHGGTGFAGIESSS-------PEV 267
Query: 341 SGNHAAI--LTSTTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATEGVV 398
G A++ T TT E+ IP + + G N++ IRQ+SGA + + +P G++ V
Sbjct: 268 KGYRASLDASTQTTHELTIPNNLIGCIIGRQGVNINEIRQMSGAQIKIANPVEGSSGRQV 327
Query: 399 MVSGTSDQMRAAQSLIHA 416
++G++ + AQ LI+A
Sbjct: 328 TITGSAASISLAQYLINA 345
>gi|339258170|ref|XP_003369271.1| putative KH domain protein [Trichinella spiralis]
gi|316966532|gb|EFV51093.1| putative KH domain protein [Trichinella spiralis]
Length = 640
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 91/372 (24%), Positives = 155/372 (41%), Gaps = 79/372 (21%)
Query: 52 FKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSE--ERIVVISARENSEMRH 109
+LL G++IGKGG ++ +++ AS+ I PDS ER++ IS + +
Sbjct: 284 LRLLIASKSAGAVIGKGGENIKRLRSQYCASVNI----PDSSTPERVLNISCANVATL-- 337
Query: 110 SPAQDAVMRVHSRIAEIGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRV 169
D V + R+ + P +A V R+LVH Q G ++GR G + E+R TGA IRV
Sbjct: 338 ---TDCVSDLIPRLDDGKSGPQEAEV-RMLVHQSQAGAIIGRAGFKIKELRDITGAGIRV 393
Query: 170 FPKDQAPRCGSPHDE-IVQVIGNYHSVQDALFHITSRLRETIFPMKRPGPNNGHSYLPPF 228
+ + C E ++Q G+ + +A+ H+ ET
Sbjct: 394 YSE-----CAPLSTERVIQFSGDKEKIVNAIRHVKEICEET------------------- 429
Query: 229 PEMPPPPFRPRHNPASPGSYPSPVGPFHSMDRGMGPSQPFDHQAAFSHGMDPMVPPNSDR 288
P ++R + + +D A +G +DR
Sbjct: 430 -------------------------PIKGVER-LYDANNYDMSYALDYG-----GYTTDR 458
Query: 289 IPFPYGSERPGHGPTFDRPPSPRSWTPQGVGGGDPRGFDASSGFTPRNRPVESGNHAAIL 348
+ R G SP + TP G + A G++P + E+ L
Sbjct: 459 NWRSNSTTRRSSGI---HSSSPAASTPHFTGVNEISPMQA-LGYSPMSLYAEN------L 508
Query: 349 TSTTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATEGVVMVSGTSDQMR 408
+T ++V IP+ + G+ ++ IR+ SGA +VV+ P P + E ++ +SGT+ Q++
Sbjct: 509 IAT-VQVTIPKELGGTIIGKGGERINRIREESGAQIVVDPPTPDSDERIITISGTTSQIK 567
Query: 409 AAQSLIHAFILC 420
Q L+ I C
Sbjct: 568 LGQYLLQQCIPC 579
>gi|218184819|gb|EEC67246.1| hypothetical protein OsI_34185 [Oryza sativa Indica Group]
Length = 470
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 72/249 (28%), Positives = 123/249 (49%), Gaps = 40/249 (16%)
Query: 67 KGG--SIVRTFQNETGASIKIADILPD-SEERIVVISARENSEMRHSPAQDAVMRVHSRI 123
+GG S+ + +TGA ++ ++ + SEER++V+S++E + SP +A++ +HS++
Sbjct: 194 RGGIFSVCVNSEVQTGACGQVKEVGKNASEERLIVVSSQEIPDDPVSPTIEALILLHSKV 253
Query: 124 AEIGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAPRCGSPHD 183
+ + + RL+V S ++GC+LG GG +++EMRR TGA IRV+ K P+ S +
Sbjct: 254 STLA--ENHQLTTRLVVPSNKVGCILGEGGKVITEMRRRTGAEIRVYSKADKPKYLSFDE 311
Query: 184 EIVQVIGNYHSVQDALFHITSRLRETIFPMKRPGPNNGHSYLPPFPEMPPPPFRPRHNPA 243
E+VQ ++F T L+ R GP + P+ P F R P
Sbjct: 312 ELVQA---------SVFSFTLGLQNL-----RTGPAH-----DPYTVYPVEYFSKREYP- 351
Query: 244 SPGSYPSPVGPFHSMDRGMGPSQPFDHQ--AAFSHGMDPM--------VPPN--SDRIPF 291
S S V P S +R ++ + + ++ S G D M VP + S+R+
Sbjct: 352 ---SGSSKVAPSASYERYAATTRLPNRELPSSISPGADYMSCRSYLDQVPTDRYSNRVTL 408
Query: 292 PYGSERPGH 300
G R G+
Sbjct: 409 QLGLLRAGN 417
>gi|410227970|gb|JAA11204.1| poly(rC) binding protein 1 [Pan troglodytes]
Length = 356
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 92/370 (24%), Positives = 159/370 (42%), Gaps = 41/370 (11%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMR- 108
+ +LL H +VGS+IGK G V+ + E+GA I I++ + ERI+ ++ N+ +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISE--GNCPERIITLTGPTNAIFKA 71
Query: 109 HSPAQDAVMR-VHSRIAEIGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASI 167
+ D + ++S + V RL+V + Q G L+G+GG + E+R +TGA +
Sbjct: 72 FAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQV 131
Query: 168 RVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKRPGPNNGHSYLPP 227
+V D P + + + + G SV + + I + ET+ + +
Sbjct: 132 QV-AGDMLP---NSTERAITIAGVPQSVTECVKQICLVMLETL-------SQSPQGRVMT 180
Query: 228 FPEMPPPPFRPRHNPASPGSYPSPVGPFHSMDRGMGPSQPFD-HQAAFSHGMDPMVPPNS 286
P P P P G H+ GP P D + H + P+
Sbjct: 181 IPYQPMPASSPVICAGGQDRCSDAAGYPHATHDLEGP--PLDAYSIQGQHTISPL----- 233
Query: 287 DRIPFPYGSERPGHGPTFDRPPSPRSWTPQGVGGGDPRGFDASSGFTPRNRPVESGNHAA 346
D + + H GG G D+SS P + +G A+
Sbjct: 234 DLAKLNQVARQQSHFAMMH-------------GGTGFAGIDSSS---PEVKGYWAGLDAS 277
Query: 347 ILTSTTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATEGVVMVSGTSDQ 406
T TT E+ IP + + G +N++ IRQ+SGA + + +P G++ V ++G++
Sbjct: 278 --TQTTHELTIPNNLIGCIIGRQGANINEIRQMSGAQIKIANPVEGSSGRQVTITGSAAS 335
Query: 407 MRAAQSLIHA 416
+ AQ LI+A
Sbjct: 336 ISLAQYLINA 345
>gi|297742912|emb|CBI35779.3| unnamed protein product [Vitis vinifera]
Length = 340
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 83/161 (51%), Gaps = 5/161 (3%)
Query: 52 FKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKI-ADILPDSEERIVVISARENSEMRHS 110
+L+C + +G +I KGG + + E+GA IK+ + ++++ +V I A+E
Sbjct: 45 LRLVCPIRNIGGVIRKGGVFINQIRRESGAIIKVDSTSAAEADDCLVTILAKERLHFPRG 104
Query: 111 PAQDAVM---RVHSRIAEIGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASI 167
P + R+ R+ + G V RLLV QIGC++G+GG I+ +R +GA I
Sbjct: 105 PQTSHCIFLYRMCMRLWDWNCPSGTFTV-RLLVSFNQIGCVIGKGGQIIQSIRSESGAQI 163
Query: 168 RVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRE 208
R+ D P C +E++Q+ V+ L+ I SRL +
Sbjct: 164 RILKDDHLPSCSLSSNELIQISKEPSIVRKILYQIASRLHD 204
Score = 39.3 bits (90), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 73/150 (48%), Gaps = 35/150 (23%)
Query: 53 KLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIA--DILPD---SEERIVVISARENSEM 107
+LL +++G +IGKGG I+++ ++E+GA I+I D LP S ++ IS +E S +
Sbjct: 133 RLLVSFNQIGCVIGKGGQIIQSIRSESGAQIRILKDDHLPSCSLSSNELIQIS-KEPSIV 191
Query: 108 RHSPAQDAVMRVHSR----------IAEIGFEPGQAVVAR------------------LL 139
R Q A R+H + IG+ +++ L+
Sbjct: 192 RKILYQIA-SRLHDNPSRSQHLFVYVVPIGYSSSGSLMGLTSGAPIMDEASSKEFSLCLV 250
Query: 140 VHSQQIGCLLGRGGHIVSEMRRATGASIRV 169
IG ++G+G I++++R+ GA+I+V
Sbjct: 251 CPIGNIGGMIGKGDVIINQIRQEFGATIKV 280
>gi|392347468|ref|XP_003749842.1| PREDICTED: poly(rC)-binding protein 1 [Rattus norvegicus]
Length = 516
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 92/374 (24%), Positives = 159/374 (42%), Gaps = 45/374 (12%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMR- 108
+ +LL H +VGS+IGK G V+ + E+GA I I++ + ERI+ ++ N+ +
Sbjct: 174 LTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISE--GNCPERIITLTGPTNAIFKA 231
Query: 109 HSPAQDAVMR-VHSRIAEIGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASI 167
+ D + ++S + V RL+V + Q G L+G+GG + E+R +TGA +
Sbjct: 232 FAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQV 291
Query: 168 RVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKRPGPNNGHSYLPP 227
+V D P + + + + G SV + + I + ET+ + +
Sbjct: 292 QV-AGDMLP---NSTERAITIAGVPQSVTECVKQICLVMLETL-------SQSPQGRVMT 340
Query: 228 FPEMPPPPFRPRHNPASPGSYPSPVGPFHSMDRGMGPSQPFD-HQAAFSHGMDPMVPPNS 286
P P P P G H+ GP P D + H + P+
Sbjct: 341 IPYQPMPASSPVICAGGQDRCSDAAGYPHATHDLEGP--PLDAYSIQGQHTISPL----- 393
Query: 287 DRIPFPYGSERPGHGPTFDRPPSPRSWTPQGVGGGDPRGFDASSGFTPRNRPVESGNHAA 346
D + + H GG G D+SS P G A+
Sbjct: 394 DLAKLNQVARQQSHFAMMH-------------GGTGFAGIDSSS-------PEVKGYWAS 433
Query: 347 I--LTSTTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATEGVVMVSGTS 404
+ T TT E+ IP + + G +N++ IRQ+SGA + + +P G++ V ++G++
Sbjct: 434 LDASTQTTHELTIPNNLIGCIIGRQGANINEIRQMSGAQIKIANPVEGSSGRQVTITGSA 493
Query: 405 DQMRAAQSLIHAFI 418
+ AQ LI+A +
Sbjct: 494 ASISLAQYLINARL 507
>gi|460771|emb|CAA55016.1| hnRNP-E1 [Homo sapiens]
Length = 356
Score = 81.3 bits (199), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 93/372 (25%), Positives = 159/372 (42%), Gaps = 45/372 (12%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMR- 108
+ +LL H +VGS+IGK G V+ + E+GA I I++ + ERI+ ++ N+ +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISE--GNCPERIITLTGPTNAIFKA 71
Query: 109 HSPAQDAVMR-VHSRIAEIGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASI 167
+ D + ++S + V RL+V + Q G L+G+GG + E+R +TGA +
Sbjct: 72 FAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQV 131
Query: 168 RVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKRPGPNNGHSYLPP 227
+V D P + + + + G SV + + I + ET+ + +
Sbjct: 132 QV-AGDMLP---NSTERAITIAGVPQSVTECVKQICLVMLETL-------SQSPQGRVMT 180
Query: 228 FPEMPPPPFRPRHNPASPGSYPSPVGPFHSMDRGMGPSQPFD-HQAAFSHGMDPMVPPNS 286
P P P P VG H+ GP P D + H + P+
Sbjct: 181 IPYQPMPASSPVICAGGQDRCSDAVGYPHATHDLEGP--PLDAYSIQGQHTISPL----- 233
Query: 287 DRIPFPYGSERPGHGPTFDRPPSPRSWTPQGVGGGDPRGFDASSGFTPRNRPVESGNHAA 346
D + + H GG G D+SS P G A+
Sbjct: 234 DLAKLNQVARQQSHFAMMH-------------GGTGFAGIDSSS-------PEVKGYWAS 273
Query: 347 I--LTSTTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATEGVVMVSGTS 404
+ T TT E+ IP + + G +N++ IRQ+SGA + + +P G++ V ++G++
Sbjct: 274 LDASTQTTHELTIPNNLIGCIIGRQGANINEIRQMSGAQIKIANPVEGSSGRQVTITGSA 333
Query: 405 DQMRAAQSLIHA 416
+ AQ LI+A
Sbjct: 334 ASISLAQYLINA 345
>gi|260829253|ref|XP_002609576.1| hypothetical protein BRAFLDRAFT_87781 [Branchiostoma floridae]
gi|229294938|gb|EEN65586.1| hypothetical protein BRAFLDRAFT_87781 [Branchiostoma floridae]
Length = 408
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 94/374 (25%), Positives = 149/374 (39%), Gaps = 85/374 (22%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMRH 109
+ +L+ VGS+IGK G ++ F+ E+GA I I+D S ERIV I+ + ++
Sbjct: 20 LTIRLIMQGKDVGSIIGKKGDTIKRFREESGARINISD--GSSPERIVTITGSTENILKA 77
Query: 110 SPAQDAVMRVHSRIAEIGFE-PGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIR 168
+ A + P V RL+V + Q G L+G+GG + E+R TGASI+
Sbjct: 78 FNMIGKKFEEDMKAAHVNSSVPVPPVTLRLIVPASQCGSLIGKGGSKIKEIREVTGASIQ 137
Query: 169 VFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKRPGPNNGHSYLPPF 228
V D P + + V V G ++ ++HI + E+ P G +
Sbjct: 138 V-AGDMLP---NSTERAVTVSGTPDAISQCVYHICCVMLES--------PPKGATI---- 181
Query: 229 PEMPPPPFRPRHNPASPGSYPSPV----GPFHSMDRGMGPSQPFDHQAAFSHGMDPMVPP 284
P++PR PAS S PV G + HQ A P + P
Sbjct: 182 ------PYKPR--PASGTSTSGPVVFAGGQLTKL-----------HQLALQQ--TPYITP 220
Query: 285 NSDRIPFPYGSERPGHGPTFDRPPSPRSWTPQGVGGGDPRGFDASSGFTPRNRPVESGNH 344
G T P G ++P GN
Sbjct: 221 ----------------GTTL------------------PAALATQFGVQTASQP---GNP 243
Query: 345 AAILTSTTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATEGVVMVSGTS 404
+ S T E+ IP + + G+ ++ IRQ SGA + + + G+T+ V ++GT
Sbjct: 244 S----SQTHELTIPNELIGCIIGKGGCKINEIRQCSGATIKIAGMQEGSTDRQVTITGTP 299
Query: 405 DQMRAAQSLIHAFI 418
+ + AQ LI+ +
Sbjct: 300 ESISMAQFLINTSL 313
>gi|410355313|gb|JAA44260.1| poly(rC) binding protein 1 [Pan troglodytes]
Length = 356
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 92/372 (24%), Positives = 159/372 (42%), Gaps = 45/372 (12%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMR- 108
+ +LL H +VGS+IGK G V+ + E+GA I I++ + ERI+ ++ N+ +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISE--GNCPERIITLTGPTNAIFKA 71
Query: 109 HSPAQDAVMR-VHSRIAEIGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASI 167
+ D + ++S + V RL+V + Q G L+G+GG + E+R +TGA +
Sbjct: 72 FAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQV 131
Query: 168 RVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKRPGPNNGHSYLPP 227
+V D P + + + + G SV + + I + ET+ + +
Sbjct: 132 QV-AGDMLP---NSTERAITIAGVPQSVTECVKQICLVMLETL-------SQSPQGRVMT 180
Query: 228 FPEMPPPPFRPRHNPASPGSYPSPVGPFHSMDRGMGPSQPFD-HQAAFSHGMDPMVPPNS 286
P P P P G H+ GP P D + H + P+
Sbjct: 181 IPYQPMPASSPVICAGGQDRCSDAAGYPHATHDLEGP--PLDAYSIQGQHTISPL----- 233
Query: 287 DRIPFPYGSERPGHGPTFDRPPSPRSWTPQGVGGGDPRGFDASSGFTPRNRPVESGNHAA 346
D + + H GG G D+SS P G A+
Sbjct: 234 DLAKLNQVARQQSHFAMMH-------------GGTGFAGIDSSS-------PEVKGYWAS 273
Query: 347 I--LTSTTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATEGVVMVSGTS 404
+ T TT E+ IP + ++ G +N++ IRQ+SGA + + +P G++ V ++G++
Sbjct: 274 LDASTQTTHELTIPNNLIGYIIGRQGANINEIRQMSGAQIKIANPVEGSSGRQVTITGSA 333
Query: 405 DQMRAAQSLIHA 416
+ AQ LI+A
Sbjct: 334 ASISLAQYLINA 345
>gi|397521888|ref|XP_003831016.1| PREDICTED: poly(rC)-binding protein 1 [Pan paniscus]
Length = 455
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 92/374 (24%), Positives = 159/374 (42%), Gaps = 45/374 (12%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMR- 108
+ +LL H +VGS+IGK G V+ + E+GA I I++ + ERI+ ++ N+ +
Sbjct: 113 LTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISE--GNCPERIITLTGPTNAIFKA 170
Query: 109 HSPAQDAVMR-VHSRIAEIGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASI 167
+ D + ++S + V RL+V + Q G L+G+GG + E+R +TGA +
Sbjct: 171 FAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQV 230
Query: 168 RVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKRPGPNNGHSYLPP 227
+V D P + + + + G SV + + I + ET+ + +
Sbjct: 231 QV-AGDMLP---NSTERAITIAGVPQSVTECVKQICLVMLETL-------SQSPQGRVMT 279
Query: 228 FPEMPPPPFRPRHNPASPGSYPSPVGPFHSMDRGMGPSQPFD-HQAAFSHGMDPMVPPNS 286
P P P P G H+ GP P D + H + P+
Sbjct: 280 IPYQPMPASSPVICAGGQDRCSDAAGYPHATHDLEGP--PLDAYSIQGQHTISPL----- 332
Query: 287 DRIPFPYGSERPGHGPTFDRPPSPRSWTPQGVGGGDPRGFDASSGFTPRNRPVESGNHAA 346
D + + H GG G D+SS P G A+
Sbjct: 333 DLAKLNQVARQQSHFAMMH-------------GGTGFAGIDSSS-------PEVKGYWAS 372
Query: 347 I--LTSTTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATEGVVMVSGTS 404
+ T TT E+ IP + + G +N++ IRQ+SGA + + +P G++ V ++G++
Sbjct: 373 LDASTQTTHELTIPNNLIGCIIGRQGANINEIRQMSGAQIKIANPVEGSSGRQVTITGSA 432
Query: 405 DQMRAAQSLIHAFI 418
+ AQ LI+A +
Sbjct: 433 ASISLAQYLINARL 446
>gi|345486914|ref|XP_001607400.2| PREDICTED: poly(rC)-binding protein 3-like [Nasonia vitripennis]
Length = 476
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 93/382 (24%), Positives = 156/382 (40%), Gaps = 64/382 (16%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENS---- 105
+ +L+ +VGS+IGK G IV+ F+ E+GA I I+D ERIV ++ NS
Sbjct: 20 LTIRLIMQGKEVGSIIGKKGEIVKRFREESGAKINISD--GSCPERIVTVTGPTNSIFKA 77
Query: 106 ------EMRHSPAQDAVMRVHSRIAEIGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSEM 159
+ +Q ++ G P + RL+V + Q G L+G+GG + E+
Sbjct: 78 FTLICKKFEEWCSQFHDIQGGGNAGGGGGVPRPPITLRLIVPASQCGSLIGKGGSKIKEI 137
Query: 160 RRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKRPGPN 219
R TGASI+V + P + + V + G ++ ++HI + E+ P
Sbjct: 138 REVTGASIQV-ASEMLP---NSTERAVTISGTSEAITQCIYHICCVMLES--------PP 185
Query: 220 NGHSYLPPFPEMPPPPFRPRHNPASPGSYPSPVGPFHSMDRGMGPSQPFDHQAAFSHGMD 279
G + P+RP+ P GP + Q F Q ++
Sbjct: 186 KGATI----------PYRPK---------PQVGGPVI-----LAGGQAFTIQGNYA---- 217
Query: 280 PMVPPNSDRIPFPYGSERPGHGPTFDRPPSPRSWTPQGVGGGDPRGFDASSGFTPRNRPV 339
VP +SD G P GG +P A +G R
Sbjct: 218 --VPAHSD-----MGKLGSSPLAGLAALGLGGLAAPANTGGLNPAALAALAGSQLRTNNA 270
Query: 340 ESGNHAAILTSTTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKP---GATEG 396
AA + T E+ +P + + G+ + ++ IRQISGA + +++ + G T+
Sbjct: 271 NRQQPAA--NNQTHEMTVPNELIGCIIGKGGTKIAEIRQISGAMIRISNCEEREGGPTDR 328
Query: 397 VVMVSGTSDQMRAAQSLIHAFI 418
+ ++G D + AQ LI+ +
Sbjct: 329 TITITGNPDSVALAQYLINMSV 350
Score = 40.4 bits (93), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 38/80 (47%), Gaps = 7/80 (8%)
Query: 129 EPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAPRCGSPHDEIVQV 188
+P + RL++ +++G ++G+ G IV R +GA I + GS + IV V
Sbjct: 15 DPSVTLTIRLIMQGKEVGSIIGKKGEIVKRFREESGAKINISD-------GSCPERIVTV 67
Query: 189 IGNYHSVQDALFHITSRLRE 208
G +S+ A I + E
Sbjct: 68 TGPTNSIFKAFTLICKKFEE 87
>gi|440907813|gb|ELR57910.1| Poly(rC)-binding protein 1 [Bos grunniens mutus]
Length = 356
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 93/372 (25%), Positives = 158/372 (42%), Gaps = 45/372 (12%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMR- 108
+ +LL H +VGS+IGK G V+ + E+GA I I++ + ERI+ ++ N+ +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISE--GNCPERIITLTGPTNAIFKA 71
Query: 109 HSPAQDAVMR-VHSRIAEIGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASI 167
+ D + ++S + V RL+V + Q G L+G+GG + E+R +TGA +
Sbjct: 72 FAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQV 131
Query: 168 RVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKRPGPNNGHSYLPP 227
+V D P + + + + G SV + + I + ET+ + +
Sbjct: 132 QV-AGDMLP---NSTERAITIAGVPQSVTECVKQICLVMLETL-------SQSPQGRVMT 180
Query: 228 FPEMPPPPFRPRHNPASPGSYPSPVGPFHSMDRGMGPSQPFD-HQAAFSHGMDPMVPPNS 286
P P P P G H+ GP P D + H + P+
Sbjct: 181 IPYQPMPASSPVICAGGQDRCSDAAGYPHATHDLEGP--PLDAYSIQGQHTISPL----- 233
Query: 287 DRIPFPYGSERPGHGPTFDRPPSPRSWTPQGVGGGDPRGFDASSGFTPRNRPVESGNHAA 346
D + + H GG G D+SS P G A+
Sbjct: 234 DLAKLNQVARQQSHFAMMH-------------GGTGFAGIDSSS-------PEVKGYWAS 273
Query: 347 I--LTSTTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATEGVVMVSGTS 404
+ T TT E+ IP + + G SN++ IRQ+SGA + + +P G++ V ++G++
Sbjct: 274 LDASTQTTHELTIPNNLIGCIIGRQGSNINEIRQMSGAQIKIANPVEGSSGRQVTITGSA 333
Query: 405 DQMRAAQSLIHA 416
+ AQ LI+A
Sbjct: 334 ASISLAQYLINA 345
>gi|108862919|gb|ABA99242.2| FLK, putative, expressed [Oryza sativa Japonica Group]
gi|222617409|gb|EEE53541.1| hypothetical protein OsJ_36750 [Oryza sativa Japonica Group]
Length = 517
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 87/171 (50%), Gaps = 10/171 (5%)
Query: 49 EVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMR 108
E VF++L KVG++IG+ G ++ E+ A IK+ D P +R V+ISA++ +
Sbjct: 114 ESVFRILVPAQKVGAVIGRKGEFIKKMCEESRARIKVLDGPPGVPDRAVMISAKDEPDAP 173
Query: 109 HSPAQDAVMRVHSRIAE-IGFEPGQAVVA-------RLLVHSQQIGCLLGRGGHIVSEMR 160
PA D ++RVH RI + + E Q A RLLV + Q G L+G+ G + ++
Sbjct: 174 LPPAVDGLLRVHKRITDGLDGESDQPQRAAGTVGPTRLLVPASQAGSLIGKQGATIKSIQ 233
Query: 161 RATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIF 211
A+ +R+ + P D +V++ G V A+ I S LR+ +
Sbjct: 234 DASKCVLRIL--ESVPPVALSDDRVVEIQGEPLDVHKAVELIASHLRKFLV 282
Score = 40.4 bits (93), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 46/87 (52%), Gaps = 4/87 (4%)
Query: 334 PRNRPVESGNHAAILTSTTI--EVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKP 391
P P SGN S+ I + +P Y V G +++S+IR+ SGA + + + P
Sbjct: 371 PTGAPPASGNQHPPHGSSQITHSMQVPLSYADAVIGAAGASISYIRRHSGATISIQEGVP 430
Query: 392 GATEGVVMVSGTSDQMRAAQSLIHAFI 418
G E V +SG++ Q++ AQ LI F+
Sbjct: 431 G--EMTVEISGSASQVQTAQQLIKNFM 455
>gi|392340090|ref|XP_002726454.2| PREDICTED: poly(rC)-binding protein 1, partial [Rattus norvegicus]
Length = 365
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 92/372 (24%), Positives = 158/372 (42%), Gaps = 45/372 (12%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMR- 108
+ +LL H +VGS+IGK G V+ + E+GA I I++ + ERI+ ++ N+ +
Sbjct: 23 LTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISE--GNCPERIITLTGPTNAIFKA 80
Query: 109 HSPAQDAVMR-VHSRIAEIGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASI 167
+ D + ++S + V RL+V + Q G L+G+GG + E+R +TGA +
Sbjct: 81 FAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQV 140
Query: 168 RVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKRPGPNNGHSYLPP 227
+V D P + + + + G SV + + I + ET+ + +
Sbjct: 141 QV-AGDMLP---NSTERAITIAGVPQSVTECVKQICLVMLETL-------SQSPQGRVMT 189
Query: 228 FPEMPPPPFRPRHNPASPGSYPSPVGPFHSMDRGMGPSQPFD-HQAAFSHGMDPMVPPNS 286
P P P P G H+ GP P D + H + P+
Sbjct: 190 IPYQPMPASSPVICAGGQDRCSDAAGYPHATHDLEGP--PLDAYSIQGQHTISPL----- 242
Query: 287 DRIPFPYGSERPGHGPTFDRPPSPRSWTPQGVGGGDPRGFDASSGFTPRNRPVESGNHAA 346
D + + H GG G D+SS P G A+
Sbjct: 243 DLAKLNQVARQQSHFAMMH-------------GGTGFAGIDSSS-------PEVKGYWAS 282
Query: 347 I--LTSTTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATEGVVMVSGTS 404
+ T TT E+ IP + + G +N++ IRQ+SGA + + +P G++ V ++G++
Sbjct: 283 LDASTQTTHELTIPNNLIGCIIGRQGANINEIRQMSGAQIKIANPVEGSSGRQVTITGSA 342
Query: 405 DQMRAAQSLIHA 416
+ AQ LI+A
Sbjct: 343 ASISLAQYLINA 354
>gi|417410101|gb|JAA51528.1| Putative polyc-binding alphacp-1, partial [Desmodus rotundus]
Length = 365
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 92/372 (24%), Positives = 158/372 (42%), Gaps = 45/372 (12%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMR- 108
+ +LL H +VGS+IGK G V+ + E+GA I I++ + ERI+ ++ N+ +
Sbjct: 23 LTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISE--GNCPERIITLTGPTNAIFKA 80
Query: 109 HSPAQDAVMR-VHSRIAEIGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASI 167
+ D + ++S + V RL+V + Q G L+G+GG + E+R +TGA +
Sbjct: 81 FAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQV 140
Query: 168 RVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKRPGPNNGHSYLPP 227
+V D P + + + + G SV + + I + ET+ + +
Sbjct: 141 QV-AGDMLP---NSTERAITIAGVPQSVTECVKQICLVMLETL-------SQSPQGRVMT 189
Query: 228 FPEMPPPPFRPRHNPASPGSYPSPVGPFHSMDRGMGPSQPFD-HQAAFSHGMDPMVPPNS 286
P P P P G H+ GP P D + H + P+
Sbjct: 190 IPYQPMPASSPVICAGGQDRCSDAAGYPHATHDLEGP--PLDAYSIQGQHTISPL----- 242
Query: 287 DRIPFPYGSERPGHGPTFDRPPSPRSWTPQGVGGGDPRGFDASSGFTPRNRPVESGNHAA 346
D + + H GG G D+SS P G A+
Sbjct: 243 DLAKLNQVARQQSHFAMMH-------------GGTGFAGIDSSS-------PEVKGYWAS 282
Query: 347 I--LTSTTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATEGVVMVSGTS 404
+ T TT E+ IP + + G +N++ IRQ+SGA + + +P G++ V ++G++
Sbjct: 283 LDASTQTTHELTIPNNLIGCIIGRQGANINEIRQMSGAQIKIANPVEGSSGRQVTITGSA 342
Query: 405 DQMRAAQSLIHA 416
+ AQ LI+A
Sbjct: 343 ASISLAQYLINA 354
>gi|417399455|gb|JAA46731.1| Putative polyc-binding alphacp-1 [Desmodus rotundus]
Length = 351
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 98/378 (25%), Positives = 166/378 (43%), Gaps = 62/378 (16%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMRH 109
+ +LL H +VGS+IGK G V+ + E+GA I I++ + ERI+ ++ N+ +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISE--GNCPERIITLAGPTNAIFKA 71
Query: 110 SPAQDAVMRVHSRIAEIGFEPGQA----VVARLLVHSQQIGCLLGRGGHIVSEMRRATGA 165
+ ++ I+ A V RL+V + Q G L+G+GG + E+R +TGA
Sbjct: 72 FAM--IIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGA 129
Query: 166 SIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKRPGPNNGHSYL 225
++V D P + + + + G S+ + + I + ET+ S
Sbjct: 130 QVQV-AGDMLP---NSTERAITIAGIPQSIIECVKQICVVMLETL------------SQS 173
Query: 226 PPFPEMPPPPFRPRHNPASPGSYPSPVGPFHSMDRGMGPSQPFDHQAAFSHGMDPMVPPN 285
P P+ P+RP+ P+S SPV DR +S G
Sbjct: 174 P--PKGVTIPYRPK--PSS-----SPVIFAGGQDR-------------YSTG-------- 203
Query: 286 SDRIPFPYGSERPGHGPTFDRPPSPRSWTPQGVGGGDPRGFDASSGFTPRNR--PVESGN 343
SD FP+ + P + PP ++T QG + P+ GN
Sbjct: 204 SDSASFPHTTPSMCLNPDLEGPP-LEAYTIQGQYAIPQPDLTKLHQLAMQQSHFPMTHGN 262
Query: 344 --HAAIL---TSTTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATEGVV 398
+A L T TT E+ IP + + G +N++ IRQ+SGA + + +P G++ V
Sbjct: 263 TGFSASLDASTQTTHELTIPNNLIGCIIGRQGANINEIRQMSGAQIKIANPVEGSSGRQV 322
Query: 399 MVSGTSDQMRAAQSLIHA 416
++G++ + AQ LI+A
Sbjct: 323 TITGSAASISLAQYLINA 340
>gi|296087074|emb|CBI33448.3| unnamed protein product [Vitis vinifera]
Length = 333
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 75/161 (46%), Gaps = 18/161 (11%)
Query: 71 IVRTFQNETGASIKIADILPDSEERIVVI-------SARENSEMRHSPAQDAVMRVHSRI 123
I++ + +T I+I + + EE +V I +A ++S SP QDA+ RVH ++
Sbjct: 9 IIKQLRVDTKFKIRIDETVSRCEELVVTIYNFSDETNAFDDSYTFVSPTQDALFRVHDKV 68
Query: 124 AEI-----GFEPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAPRC 178
FE V +LLV S QIGC++G+GG I+ + +GA I + D C
Sbjct: 69 VSEKVHSEDFEEASQVTVQLLVTSDQIGCVIGKGGQIIQNIYSESGAQIYILKNDHLLSC 128
Query: 179 GSPHDEIVQV------IGNYHSVQDALFHITSRLRETIFPM 213
DE+VQ+ +G F I L +I P+
Sbjct: 129 ALSFDELVQISGERPLLGRLFIKLHLFFMIIQHLLASIVPI 169
>gi|351714348|gb|EHB17267.1| Poly(rC)-binding protein 1 [Heterocephalus glaber]
Length = 355
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 92/372 (24%), Positives = 158/372 (42%), Gaps = 45/372 (12%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMR- 108
+ +LL H +VGS+IGK G V+ + E+GA I I++ + ERI+ ++ N+ +
Sbjct: 13 LTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISE--GNCPERIITLTGPTNAIFKA 70
Query: 109 HSPAQDAVMR-VHSRIAEIGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASI 167
+ D + ++S + V RL+V + Q G L+G+GG + E+R +TGA +
Sbjct: 71 FAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQV 130
Query: 168 RVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKRPGPNNGHSYLPP 227
+V D P + + + + G SV + + I + ET+ + +
Sbjct: 131 QV-AGDMLP---NSTERAITIAGVPQSVTECVKQICLVMLETL-------SQSPQGRVMT 179
Query: 228 FPEMPPPPFRPRHNPASPGSYPSPVGPFHSMDRGMGPSQPFD-HQAAFSHGMDPMVPPNS 286
P P P P G H+ GP P D + H + P+
Sbjct: 180 IPYQPMPASSPVICAGGQDRCSDAAGYPHATHDLEGP--PLDAYSIQGQHTISPL----- 232
Query: 287 DRIPFPYGSERPGHGPTFDRPPSPRSWTPQGVGGGDPRGFDASSGFTPRNRPVESGNHAA 346
D + + H GG G D+SS P G A+
Sbjct: 233 DLAKLNQVARQQSHFAMMH-------------GGTGFAGIDSSS-------PEVKGYWAS 272
Query: 347 I--LTSTTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATEGVVMVSGTS 404
+ T TT E+ IP + + G +N++ IRQ+SGA + + +P G++ V ++G++
Sbjct: 273 LDASTQTTHELTIPNNLIGCIIGRQGANINEIRQMSGAQIKIANPVEGSSGRQVTITGSA 332
Query: 405 DQMRAAQSLIHA 416
+ AQ LI+A
Sbjct: 333 ASISLAQYLINA 344
>gi|6754994|ref|NP_035995.1| poly(rC)-binding protein 1 [Mus musculus]
gi|62751650|ref|NP_001015565.1| poly(rC)-binding protein 1 [Bos taurus]
gi|126723096|ref|NP_001075593.1| poly(rC)-binding protein 1 [Oryctolagus cuniculus]
gi|222352151|ref|NP_006187.2| poly(rC)-binding protein 1 [Homo sapiens]
gi|379642963|ref|NP_001243850.1| poly(rC)-binding protein 1 [Equus caballus]
gi|114577924|ref|XP_515530.2| PREDICTED: poly(rC)-binding protein 1 isoform 3 [Pan troglodytes]
gi|296223628|ref|XP_002757702.1| PREDICTED: poly(rC)-binding protein 1-like [Callithrix jacchus]
gi|297667414|ref|XP_002811975.1| PREDICTED: poly(rC)-binding protein 1 isoform 1 [Pongo abelii]
gi|301758216|ref|XP_002914950.1| PREDICTED: poly(rC)-binding protein 1-like [Ailuropoda melanoleuca]
gi|332226765|ref|XP_003262561.1| PREDICTED: poly(rC)-binding protein 1 [Nomascus leucogenys]
gi|348566575|ref|XP_003469077.1| PREDICTED: poly(rC)-binding protein 1-like [Cavia porcellus]
gi|354491739|ref|XP_003508012.1| PREDICTED: poly(rC)-binding protein 1-like [Cricetulus griseus]
gi|395731716|ref|XP_003775951.1| PREDICTED: poly(rC)-binding protein 1 isoform 2 [Pongo abelii]
gi|395841306|ref|XP_003793486.1| PREDICTED: poly(rC)-binding protein 1 [Otolemur garnettii]
gi|402891162|ref|XP_003908824.1| PREDICTED: poly(rC)-binding protein 1 [Papio anubis]
gi|410954989|ref|XP_003984141.1| PREDICTED: poly(rC)-binding protein 1 [Felis catus]
gi|426223390|ref|XP_004005858.1| PREDICTED: poly(rC)-binding protein 1 [Ovis aries]
gi|426335835|ref|XP_004029412.1| PREDICTED: poly(rC)-binding protein 1 [Gorilla gorilla gorilla]
gi|12230408|sp|O19048.1|PCBP1_RABIT RecName: Full=Poly(rC)-binding protein 1; AltName: Full=Alpha-CP1;
AltName: Full=Heterogeneous nuclear ribonucleoprotein
E1; Short=hnRNP E1
gi|42559420|sp|P60335.1|PCBP1_MOUSE RecName: Full=Poly(rC)-binding protein 1; AltName: Full=Alpha-CP1;
AltName: Full=Heterogeneous nuclear ribonucleoprotein
E1; Short=hnRNP E1
gi|42560548|sp|Q15365.2|PCBP1_HUMAN RecName: Full=Poly(rC)-binding protein 1; AltName: Full=Alpha-CP1;
AltName: Full=Heterogeneous nuclear ribonucleoprotein
E1; Short=hnRNP E1; AltName: Full=Nucleic acid-binding
protein SUB2.3
gi|75040221|sp|Q5E9A3.1|PCBP1_BOVIN RecName: Full=Poly(rC)-binding protein 1; AltName: Full=Alpha-CP1
gi|2134737|pir||S58529 alpha-complex protein 1 - human
gi|5805273|gb|AAD51920.1|AF139894_1 RNA-binding protein alpha-CP1 [Mus musculus]
gi|5805275|gb|AAD51921.1|AF139895_1 RNA-binding protein alpha-CP1 [Mus musculus]
gi|1215671|gb|AAA91317.1| alpha-CP1 [Homo sapiens]
gi|2644966|emb|CAA05814.1| hnRNP-E1 protein [Oryctolagus cuniculus]
gi|13435897|gb|AAH04793.1| Poly(rC) binding protein 1 [Mus musculus]
gi|24980783|gb|AAH39742.1| Poly(rC) binding protein 1 [Homo sapiens]
gi|47124405|gb|AAH69915.1| Poly(rC) binding protein 1 [Mus musculus]
gi|59858399|gb|AAX09034.1| poly(rC) binding protein 1 [Bos taurus]
gi|62702265|gb|AAX93191.1| unknown [Homo sapiens]
gi|119620240|gb|EAW99834.1| poly(rC) binding protein 1 [Homo sapiens]
gi|148666767|gb|EDK99183.1| mCG130511 [Mus musculus]
gi|189054893|dbj|BAG36897.1| unnamed protein product [Homo sapiens]
gi|208968661|dbj|BAG74169.1| poly(rC) binding protein 1 [synthetic construct]
gi|281346699|gb|EFB22283.1| hypothetical protein PANDA_002891 [Ailuropoda melanoleuca]
gi|296482414|tpg|DAA24529.1| TPA: poly(rC)-binding protein 1 [Bos taurus]
gi|312151908|gb|ADQ32466.1| poly(rC) binding protein 1 [synthetic construct]
gi|344250809|gb|EGW06913.1| Poly(rC)-binding protein 1 [Cricetulus griseus]
gi|355565760|gb|EHH22189.1| hypothetical protein EGK_05412 [Macaca mulatta]
gi|355751386|gb|EHH55641.1| hypothetical protein EGM_04885 [Macaca fascicularis]
gi|380813262|gb|AFE78505.1| poly(rC)-binding protein 1 [Macaca mulatta]
gi|380813264|gb|AFE78506.1| poly(rC)-binding protein 1 [Macaca mulatta]
gi|383418769|gb|AFH32598.1| poly(rC)-binding protein 1 [Macaca mulatta]
gi|384940310|gb|AFI33760.1| poly(rC)-binding protein 1 [Macaca mulatta]
gi|384947378|gb|AFI37294.1| poly(rC)-binding protein 1 [Macaca mulatta]
gi|410262902|gb|JAA19417.1| poly(rC) binding protein 1 [Pan troglodytes]
gi|431912608|gb|ELK14626.1| Poly(rC)-binding protein 1 [Pteropus alecto]
gi|444723406|gb|ELW64063.1| Poly(rC)-binding protein 1 [Tupaia chinensis]
Length = 356
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 92/372 (24%), Positives = 158/372 (42%), Gaps = 45/372 (12%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMR- 108
+ +LL H +VGS+IGK G V+ + E+GA I I++ + ERI+ ++ N+ +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISE--GNCPERIITLTGPTNAIFKA 71
Query: 109 HSPAQDAVMR-VHSRIAEIGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASI 167
+ D + ++S + V RL+V + Q G L+G+GG + E+R +TGA +
Sbjct: 72 FAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQV 131
Query: 168 RVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKRPGPNNGHSYLPP 227
+V D P + + + + G SV + + I + ET+ + +
Sbjct: 132 QV-AGDMLP---NSTERAITIAGVPQSVTECVKQICLVMLETL-------SQSPQGRVMT 180
Query: 228 FPEMPPPPFRPRHNPASPGSYPSPVGPFHSMDRGMGPSQPFD-HQAAFSHGMDPMVPPNS 286
P P P P G H+ GP P D + H + P+
Sbjct: 181 IPYQPMPASSPVICAGGQDRCSDAAGYPHATHDLEGP--PLDAYSIQGQHTISPL----- 233
Query: 287 DRIPFPYGSERPGHGPTFDRPPSPRSWTPQGVGGGDPRGFDASSGFTPRNRPVESGNHAA 346
D + + H GG G D+SS P G A+
Sbjct: 234 DLAKLNQVARQQSHFAMMH-------------GGTGFAGIDSSS-------PEVKGYWAS 273
Query: 347 I--LTSTTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATEGVVMVSGTS 404
+ T TT E+ IP + + G +N++ IRQ+SGA + + +P G++ V ++G++
Sbjct: 274 LDASTQTTHELTIPNNLIGCIIGRQGANINEIRQMSGAQIKIANPVEGSSGRQVTITGSA 333
Query: 405 DQMRAAQSLIHA 416
+ AQ LI+A
Sbjct: 334 ASISLAQYLINA 345
>gi|443687982|gb|ELT90806.1| hypothetical protein CAPTEDRAFT_1308 [Capitella teleta]
Length = 333
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 88/372 (23%), Positives = 157/372 (42%), Gaps = 46/372 (12%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENS---- 105
V +++ + GS+IGK G V+ F+ ++GA I I+D ERIV ++ +
Sbjct: 2 VTLRMIMQGKEAGSIIGKKGDNVKKFREDSGAKINISD--SSCPERIVTVTGTTDQIFKA 59
Query: 106 -EMRHSPAQDAVMRVHSRIAEIGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATG 164
M ++ ++ H+ P V RL+V + Q G L+G+GG + E+R TG
Sbjct: 60 FTMICKKFEEDIVNTHNSTTL----PKPPVTLRLIVPASQCGSLIGKGGAKIKEIRELTG 115
Query: 165 ASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKRPGPNNGHSY 224
ASI+V + P + + V V G ++ +++I + E+ P G +
Sbjct: 116 ASIQV-ASEMLP---NSTERAVTVSGQADAITQCIYNICCVMLES--------PPKGAT- 162
Query: 225 LPPFPEMPPPPFRPRHNPASPGSYPSPVGPFHSMDRGMGPSQPFDHQAAFSHGMDPMVPP 284
P P P P P+S G + + PS P Q S P+ PP
Sbjct: 163 ---IPYRPKPCVPPVMLPSSCGGQAFSI---QGQQILLPPSHPNATQPDVSPHCVPLPPP 216
Query: 285 NSDRIPFPYGSERPGHGPTFDRPPSPRSWTPQGVGGGDPRGFDASSGFTPRNRPVESGNH 344
+ + D P + G+ P+ P ++G
Sbjct: 217 CFISLRARLQTHSLICIIIRDVYPGMNAAMAAGI---------------PQFAPRQAGPG 261
Query: 345 AAILTSTTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATEGVVMVSGTS 404
A +++ T E+ IP + + G + ++ IRQ+SGA + + + G+++ V + G+
Sbjct: 262 AN-MSAQTHEMTIPNDLIGCIIGRGGAKINEIRQLSGATIKIANADEGSSDRKVTIMGSL 320
Query: 405 DQMRAAQSLIHA 416
+ + AAQ +I+A
Sbjct: 321 ETIHAAQYMINA 332
Score = 43.5 bits (101), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 39/61 (63%), Gaps = 5/61 (8%)
Query: 145 IGCLLGRGGHIVSEMRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITS 204
IGC++GRGG ++E+R+ +GA+I++ D+ GS D V ++G+ ++ A + I +
Sbjct: 278 IGCIIGRGGAKINEIRQLSGATIKIANADE----GS-SDRKVTIMGSLETIHAAQYMINA 332
Query: 205 R 205
R
Sbjct: 333 R 333
>gi|351712813|gb|EHB15732.1| Poly(rC)-binding protein 1 [Heterocephalus glaber]
Length = 355
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 91/372 (24%), Positives = 158/372 (42%), Gaps = 45/372 (12%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMR- 108
+ +LL H +VGS+IGK G V+ + E+GA I I++ + ERI+ ++ N+ +
Sbjct: 13 LTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISE--GNCPERIITLTGPTNAIFKA 70
Query: 109 HSPAQDAVMR-VHSRIAEIGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASI 167
+ D + ++S + V RL+V + Q G L+G+GG + E+R +TGA +
Sbjct: 71 FAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQV 130
Query: 168 RVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKRPGPNNGHSYLPP 227
+V D P + + + + G SV + + I + ET+ + +
Sbjct: 131 QV-AGDMLP---NSTERAITIAGVPQSVTECVKQICLVMLETL-------SQSPQGRVMT 179
Query: 228 FPEMPPPPFRPRHNPASPGSYPSPVGPFHSMDRGMGPSQPFD-HQAAFSHGMDPMVPPNS 286
P P P P G H+ GP P D + H + P+
Sbjct: 180 IPYQPMPASSPVICAGGQDRCSDAAGYPHATHDLEGP--PLDAYSIQGQHTISPL----- 232
Query: 287 DRIPFPYGSERPGHGPTFDRPPSPRSWTPQGVGGGDPRGFDASSGFTPRNRPVESGNHAA 346
D + + H GG G D+SS P G A+
Sbjct: 233 DLAKLNQVARQQSHFAMMH-------------GGTGFAGIDSSS-------PEVKGYWAS 272
Query: 347 I--LTSTTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATEGVVMVSGTS 404
+ T TT E+ IP + + G +N++ IRQ+SGA + + +P G++ + ++G++
Sbjct: 273 LDASTQTTHELTIPNNLIGCIIGRQGANINEIRQMSGAQIKIANPVEGSSGRQITITGSA 332
Query: 405 DQMRAAQSLIHA 416
+ AQ LI+A
Sbjct: 333 ASISLAQYLINA 344
>gi|417410186|gb|JAA51570.1| Putative polyc-binding alphacp-1, partial [Desmodus rotundus]
Length = 376
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 98/394 (24%), Positives = 169/394 (42%), Gaps = 81/394 (20%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMRH 109
+ +LL H +VGS+IGK G V+ + E+GA I I++ + ERI+ ++ N+ +
Sbjct: 26 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISE--GNCPERIITLAGPTNAIFKA 83
Query: 110 SPAQDAVMRVHSRIAEIGFEPGQA----VVARLLVHSQQIGCLLGRGGHIVSEMRRATGA 165
+ ++ I+ A V RL+V + Q G L+G+GG + E+R +TGA
Sbjct: 84 FAM--IIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGA 141
Query: 166 SIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKRPGPNNGHSYL 225
++V D P + + + + G S+ + + I + ET+ S
Sbjct: 142 QVQV-AGDMLP---NSTERAITIAGIPQSIIECVKQICVVMLETL------------SQS 185
Query: 226 PPFPEMPPPPFRPRHNPASPGSYPSPVGPFHSMDRGMGPSQPFDHQAAFSHGMDPMVPPN 285
P P+ P+RP+ P+S SPV DR +S G
Sbjct: 186 P--PKGVTIPYRPK--PSS-----SPVIFAGGQDR-------------YSTG-------- 215
Query: 286 SDRIPFPYGSERPGHGPTFDRPPSPRSWTPQG-----------------------VGGGD 322
SD FP+ + P + PP ++T QG + G+
Sbjct: 216 SDSASFPHTTPSMCLNPDLEGPP-LEAYTIQGQYAIPQPDLTKLHQLAMQQSHFPMTHGN 274
Query: 323 PRGFDASSGFTPRNRPVESGNHAAILTSTTIEVVIPQLYMAHVYGENNSNLSHIRQISGA 382
GF +P + + A+ T TT E+ IP + + G +N++ IRQ+SGA
Sbjct: 275 -TGFSGIESSSPEVKGYWASLDAS--TQTTHELTIPNNLIGCIIGRQGANINEIRQMSGA 331
Query: 383 NVVVNDPKPGATEGVVMVSGTSDQMRAAQSLIHA 416
+ + +P G++ V ++G++ + AQ LI+A
Sbjct: 332 QIKIANPVEGSSGRQVTITGSAASISLAQYLINA 365
>gi|57093423|ref|XP_538537.1| PREDICTED: poly(rC)-binding protein 1 isoform 1 [Canis lupus
familiaris]
Length = 356
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 92/372 (24%), Positives = 158/372 (42%), Gaps = 45/372 (12%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMR- 108
+ +LL H +VGS+IGK G V+ + E+GA I I++ + ERI+ ++ N+ +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISE--GNCPERIITLTGPTNAIFKA 71
Query: 109 HSPAQDAVMR-VHSRIAEIGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASI 167
+ D + ++S + V RL+V + Q G L+G+GG + E+R +TGA +
Sbjct: 72 FAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQV 131
Query: 168 RVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKRPGPNNGHSYLPP 227
+V D P + + + + G SV + + I + ET+ + +
Sbjct: 132 QV-AGDMLP---NSTERAITIAGVPQSVTECVKQICLVMLETL-------SQSPQGRVMT 180
Query: 228 FPEMPPPPFRPRHNPASPGSYPSPVGPFHSMDRGMGPSQPFD-HQAAFSHGMDPMVPPNS 286
P P P P G H+ GP P D + H + P+
Sbjct: 181 IPYQPMPASSPVICAGGQDRCGDAAGYPHATHDLEGP--PLDAYSIQGQHTISPL----- 233
Query: 287 DRIPFPYGSERPGHGPTFDRPPSPRSWTPQGVGGGDPRGFDASSGFTPRNRPVESGNHAA 346
D + + H GG G D+SS P G A+
Sbjct: 234 DLAKLNQVARQQSHFAMMH-------------GGTGFAGIDSSS-------PEVKGYWAS 273
Query: 347 I--LTSTTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATEGVVMVSGTS 404
+ T TT E+ IP + + G +N++ IRQ+SGA + + +P G++ V ++G++
Sbjct: 274 LDASTQTTHELTIPNNLIGCIIGRQGANINEIRQMSGAQIKIANPVEGSSGRQVTITGSA 333
Query: 405 DQMRAAQSLIHA 416
+ AQ LI+A
Sbjct: 334 ASISLAQYLINA 345
>gi|348507477|ref|XP_003441282.1| PREDICTED: poly(rC)-binding protein 3-like [Oreochromis niloticus]
Length = 434
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 99/382 (25%), Positives = 152/382 (39%), Gaps = 95/382 (24%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMRH 109
+ +LL H +VGS+IGK G V+ + E+GA I I++ S ERIV I+
Sbjct: 17 LTLRLLMHGKEVGSIIGKKGETVKKMREESGARINISE--GSSPERIVTITG-------- 66
Query: 110 SPAQDAVMRVHSRIAEIGFEPGQA------------VVARLLVHSQQIGCLLGRGGHIVS 157
+ + R S IA+ E A V RL+ Q G L+G+GG +
Sbjct: 67 --PTEGIFRAFSMIAQKFEEDITAAMTNSNVTSKPPVTLRLVFPGSQCGSLIGKGGSKIK 124
Query: 158 EMRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKRPG 217
E+R TGA ++V D P + V + G ++ + HI S + E+
Sbjct: 125 EIRETTGAQVQV-AGDMLPDS---TERAVTISGTPQAITQCVRHICSVMLES-------- 172
Query: 218 PNNGHSYLPPFPEMPPPPFRPRHNPASPGSYPSPVGPFHSMDRGMGPSQ-PFDHQAAFSH 276
P G + P+RP+ PA G++ + + P HS P Q F HQ
Sbjct: 173 PPKGATI----------PYRPKVIPA--GTH-AVLAPQHSAQAFAIPGQYAFAHQDLTKL 219
Query: 277 GMDPMVPPNSDRIPFPYGSERPGHGPTFDRPPSPRSWTPQGVGGGDPRGFDASSGFTPRN 336
M IP P + PTF G DAS+
Sbjct: 220 HQLAM-----QHIPLPSLGQS---NPTFP-------------------GLDASA------ 246
Query: 337 RPVESGNHAAILTSTTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATEG 396
P S E+ IP ++ + G S ++ IRQ+SGA++ + G+
Sbjct: 247 -PTSSQ-----------ELAIPNDFIGCIIGRQGSKINEIRQVSGAHIKIASATDGSAMR 294
Query: 397 VVMVSGTSDQMRAAQSLIHAFI 418
V ++G+ + AQ LI+A +
Sbjct: 295 QVTITGSPASISVAQYLINASL 316
>gi|14141168|ref|NP_005007.2| poly(rC)-binding protein 2 isoform a [Homo sapiens]
gi|47940610|gb|AAH71942.1| Poly(rC) binding protein 2 [Homo sapiens]
gi|119617115|gb|EAW96709.1| poly(rC) binding protein 2, isoform CRA_d [Homo sapiens]
Length = 366
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 97/393 (24%), Positives = 169/393 (43%), Gaps = 80/393 (20%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMRH 109
+ +LL H +VGS+IGK G V+ + E+GA I I++ + ERI+ ++ N+ +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISE--GNCPERIITLAGPTNAIFKA 71
Query: 110 SPAQDAVMRVHSRIAEIGFEPGQA----VVARLLVHSQQIGCLLGRGGHIVSEMRRATGA 165
+ ++ I+ A V RL+V + Q G L+G+GG + E+R +TGA
Sbjct: 72 FAM--IIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGA 129
Query: 166 SIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKRPGPNNGHSYL 225
++V D P + + + + G S+ + + I + ET+ S
Sbjct: 130 QVQV-AGDMLP---NSTERAITIAGIPQSIIECVKQICVVMLETL------------SQS 173
Query: 226 PPFPEMPPPPFRPRHNPASPGSYPSPVGPFHSMDRGMGPSQPFDHQAAFSHGMDPMVPPN 285
P P+ P+RP+ P+S SPV DR +S G
Sbjct: 174 P--PKGVTIPYRPK--PSS-----SPVIFAGGQDR-------------YSTG-------- 203
Query: 286 SDRIPFPYGSERPGHGPTFDRPPSPRSWTPQG-----------------------VGGGD 322
SD FP+ + P + PP ++T QG + G+
Sbjct: 204 SDSASFPHTTPSMCLNPDLEGPP-LEAYTIQGQYAIPQPDLTKLHQLAMQQSHFPMTHGN 262
Query: 323 PRGFDASSGFTPRNRPVESGNHAAILTSTTIEVVIPQLYMAHVYGENNSNLSHIRQISGA 382
GF +P + +G A+ T T+ E+ IP + + G + ++ IRQ+SGA
Sbjct: 263 -TGFSGIESSSPEVKGYWAGLDASAQT-TSHELTIPNDLIGCIIGRQGAKINEIRQMSGA 320
Query: 383 NVVVNDPKPGATEGVVMVSGTSDQMRAAQSLIH 415
+ + +P G+T+ V ++G++ + AQ LI+
Sbjct: 321 QIKIANPVEGSTDRQVTITGSAASISLAQYLIN 353
>gi|384947380|gb|AFI37295.1| poly(rC)-binding protein 1 [Macaca mulatta]
Length = 358
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 90/369 (24%), Positives = 158/369 (42%), Gaps = 40/369 (10%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMR- 108
+ +LL H +VGS+IGK G V+ + E+GA I I++ + ERI+ ++ N+ +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISE--GNCPERIITLTGPTNAIFKA 71
Query: 109 HSPAQDAVMR-VHSRIAEIGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASI 167
+ D + ++S + V RL+V + Q G L+G+GG + E+R +TGA +
Sbjct: 72 FAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQV 131
Query: 168 RVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKRPGPNNGHSYLPP 227
+V D P + + + + G SV + + I + ET+ + +
Sbjct: 132 QV-AGDMLP---NSTERAITIAGVPQSVTECVKQICLVMLETL-------SQSPQGRVMT 180
Query: 228 FPEMPPPPFRPRHNPASPGSYPSPVGPFHSMDRGMGPSQPFD-HQAAFSHGMDPMVPPNS 286
P P P P G H+ GP P D + H + P+
Sbjct: 181 IPYQPMPASSPVICAGGQDRCSDAAGYPHATHDLEGP--PLDAYSIQGQHTISPL----- 233
Query: 287 DRIPFPYGSERPGHGPTFDRPPSPRSWTPQGVGGGDPRGFDASSGFTPRNRPVESGNHAA 346
D + + H GG G D+SS P + +G A+
Sbjct: 234 DLAKLNQVARQQSHFAMMH-------------GGTGFAGIDSSS---PEVKGYWAGLDAS 277
Query: 347 ILTSTTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATEGVVMVSGTSDQ 406
T T+ E+ IP + + G + ++ IRQ+SGA + + +P G+T+ V ++G++
Sbjct: 278 AQT-TSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTITGSAAS 336
Query: 407 MRAAQSLIH 415
+ AQ LI+
Sbjct: 337 ISLAQYLIN 345
>gi|363747263|ref|XP_003643960.1| PREDICTED: poly(rC)-binding protein 2-like isoform 2 [Gallus
gallus]
Length = 349
Score = 77.8 bits (190), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 95/372 (25%), Positives = 165/372 (44%), Gaps = 44/372 (11%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMRH 109
+ +LL H +VGS+IGK G V+ + E+GA I I++ + ERI+ ++ N+ +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISE--GNCPERIITLAGPTNAIFKA 71
Query: 110 SPAQDAVMRVHSRIAEIGFEPGQA----VVARLLVHSQQIGCLLGRGGHIVSEMRRATGA 165
+ ++ I+ A V RL+V + Q G L+G+GG + E+R +TGA
Sbjct: 72 FAM--IIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGA 129
Query: 166 SIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKRPGPNNGHSYL 225
++V D P + + + + G S+ + + I + E+ P G +
Sbjct: 130 QVQV-AGDMLP---NSTERAITIAGIPQSIIECVKQICVVMLES--------PPKGVTI- 176
Query: 226 PPFPEMPPPPFRPRHNPASPGSYPSPVGPFHSMDRGMGPSQPFDHQA-AFSHGMDPMVPP 284
P+RP+ P+S SPV DR S + H A + D PP
Sbjct: 177 ---------PYRPK--PSS-----SPVIFAGGQDRYSSGSASYPHTAPSMCLNSDLEGPP 220
Query: 285 NSD-RIPFPYGSERPGHGPTFDRPPSPRSWTPQGVGGGDPRGFDASSGFTPRNRPVESGN 343
I Y +P + +S P G G ++SS P + +G
Sbjct: 221 QEAYTIQGQYAIPQPDL-TKLHQLAMQQSHFPMSHGNTGFSGIESSS---PEVKGYWAGL 276
Query: 344 HAAILTSTTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATEGVVMVSGT 403
A+ T T+ E+ IP + + G + ++ IRQ+SGA + + +P G+T+ V ++G+
Sbjct: 277 DASAQT-TSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTITGS 335
Query: 404 SDQMRAAQSLIH 415
+ + AQ LI+
Sbjct: 336 AASISLAQYLIN 347
>gi|417410200|gb|JAA51577.1| Putative polyc-binding alphacp-1, partial [Desmodus rotundus]
Length = 378
Score = 77.8 bits (190), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 97/393 (24%), Positives = 169/393 (43%), Gaps = 80/393 (20%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMRH 109
+ +LL H +VGS+IGK G V+ + E+GA I I++ + ERI+ ++ N+ +
Sbjct: 26 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISE--GNCPERIITLAGPTNAIFKA 83
Query: 110 SPAQDAVMRVHSRIAEIGFEPGQA----VVARLLVHSQQIGCLLGRGGHIVSEMRRATGA 165
+ ++ I+ A V RL+V + Q G L+G+GG + E+R +TGA
Sbjct: 84 FAM--IIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGA 141
Query: 166 SIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKRPGPNNGHSYL 225
++V D P + + + + G S+ + + I + ET+ S
Sbjct: 142 QVQV-AGDMLP---NSTERAITIAGIPQSIIECVKQICVVMLETL------------SQS 185
Query: 226 PPFPEMPPPPFRPRHNPASPGSYPSPVGPFHSMDRGMGPSQPFDHQAAFSHGMDPMVPPN 285
P P+ P+RP+ P+S SPV DR +S G
Sbjct: 186 P--PKGVTIPYRPK--PSS-----SPVIFAGGQDR-------------YSTG-------- 215
Query: 286 SDRIPFPYGSERPGHGPTFDRPPSPRSWTPQG-----------------------VGGGD 322
SD FP+ + P + PP ++T QG + G+
Sbjct: 216 SDSASFPHTTPSMCLNPDLEGPP-LEAYTIQGQYAIPQPDLTKLHQLAMQQSHFPMTHGN 274
Query: 323 PRGFDASSGFTPRNRPVESGNHAAILTSTTIEVVIPQLYMAHVYGENNSNLSHIRQISGA 382
GF +P + +G A+ T T+ E+ IP + + G + ++ IRQ+SGA
Sbjct: 275 -TGFSGIESSSPEVKGYWAGLDASAQT-TSHELTIPNDLIGCIIGRQGAKINEIRQMSGA 332
Query: 383 NVVVNDPKPGATEGVVMVSGTSDQMRAAQSLIH 415
+ + +P G+T+ V ++G++ + AQ LI+
Sbjct: 333 QIKIANPVEGSTDRQVTITGSAASISLAQYLIN 365
>gi|426218399|ref|XP_004003434.1| PREDICTED: poly(rC)-binding protein 3 isoform 3 [Ovis aries]
Length = 336
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 100/390 (25%), Positives = 156/390 (40%), Gaps = 88/390 (22%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMRH 109
+ +LL H +VGS+IGK G V+ + E+GA I I++ + ERIV I+
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE--GNCPERIVTITG-------- 63
Query: 110 SPAQDAVMRVHSRIA---------EIGFEPGQA---VVARLLVHSQQIGCLLGRGGHIVS 157
DA+ + + IA + P + V RL+V + Q G L+G+GG +
Sbjct: 64 --PTDAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIK 121
Query: 158 EMRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKRPG 217
E+R +TGA ++V D P + + V + G DA+ ++ + ++
Sbjct: 122 EIRESTGAQVQV-AGDMLP---NSTERAVTISGT----PDAIIQCVKQICVVMLEVQSKS 173
Query: 218 PNNGHS-YLPPFPEMPPPPFRPRHNPASPGSYPSPVGPFHSMDRGMGPSQPFDHQAAFSH 276
P G S + P P P F G Y P H P HQ A
Sbjct: 174 PPRGVSRVVAPKPASTPVIFAGGQAYTIQGQYAIP----H-------PDLTKLHQLAM-- 220
Query: 277 GMDPMVPPNSDRIPF-PYGSERPGHGPTFDRP-PSPRS-WTPQGVGGGDPRGFDASSGFT 333
+ PF P G P P DR P RS W DAS
Sbjct: 221 ----------QQTPFPPLGQTNPAF-PGTDRAVPFVRSPWA----------CLDASP--- 256
Query: 334 PRNRPVESGNHAAILTSTTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGA 393
++T E+ IP + + G + ++ IRQ+SGA + + + G+
Sbjct: 257 ---------------PASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEGS 301
Query: 394 TEGVVMVSGTSDQMRAAQSLIHAFILCGVT 423
+E + ++GT + AQ LI+A + VT
Sbjct: 302 SERQITITGTPANISLAQYLINARLTSEVT 331
>gi|115482006|ref|NP_001064596.1| Os10g0414700 [Oryza sativa Japonica Group]
gi|78708635|gb|ABB47610.1| KH domain containing protein, expressed [Oryza sativa Japonica
Group]
gi|113639205|dbj|BAF26510.1| Os10g0414700 [Oryza sativa Japonica Group]
gi|215693240|dbj|BAG88622.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222612825|gb|EEE50957.1| hypothetical protein OsJ_31513 [Oryza sativa Japonica Group]
Length = 586
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 102/211 (48%), Gaps = 19/211 (9%)
Query: 51 VFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMRHS 110
VF++L KVG++IG G +R ET A +++ + ER V+I A+E +
Sbjct: 60 VFRMLIPATKVGAVIGHSGERLRRLCEETKACVRVIGGHFAAAERAVIIFAKEQPDEPKP 119
Query: 111 PAQDAVMRVHSRIAE---IGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASI 167
PA DA++RV+ I + VVAR+L S+Q L+G G +++ +++A+ +I
Sbjct: 120 PAIDALLRVYECIINDDGLDVRYNNIVVARILTPSEQAASLIGDQGSVINYIKKASKTNI 179
Query: 168 RVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRE-----TIFPMKRPGPNNGH 222
V D P D I+++ G V AL + LR+ ++ P+ P H
Sbjct: 180 HVIDGDLPP-VALEDDMIIEIWGLPARVHQALELVACHLRKYLVHRSVIPLFDP-----H 233
Query: 223 SYLPPFP-EMPPPPFRPRH----NPASPGSY 248
+P P +MPP + H + ASPG Y
Sbjct: 234 VSIPISPVDMPPFHYSDHHEGLLHEASPGYY 264
>gi|311252459|ref|XP_003125105.1| PREDICTED: poly(rC)-binding protein 1-like [Sus scrofa]
Length = 356
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 95/373 (25%), Positives = 165/373 (44%), Gaps = 47/373 (12%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMR- 108
+ +LL H +VGS+IGK G V+ + E+GA I I++ + ERI+ ++ N+ +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISE--GNCPERIITLTGPTNAIFKA 71
Query: 109 HSPAQDAVMR-VHSRIAEIGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASI 167
+ D + ++S + V RL+V + Q G L+G+GG + E+R +TGA +
Sbjct: 72 FAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQV 131
Query: 168 RVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKRPGPNNGHSYLPP 227
+V D P + + + + G SV + + I + ET+ P
Sbjct: 132 QV-AGDMLP---NSTERAITIAGVPQSVTECVKQICLVMLETLSQ-------------SP 174
Query: 228 FPEMPPPPFRPRHNPASPGSYPSPVGPFHSMDRGMGPSQPFDHQAAFSHGMDPM--VPPN 285
+ P++P PAS SPV DR A + H + P +
Sbjct: 175 QGRVMTIPYQPM--PAS-----SPVICAGGQDR-------CSDAAGYPHATHDLEGTPLD 220
Query: 286 SDRIPFPYGSERPGHGPTFDRPPSPRSWTPQGVGGGDPRGFDASSGFTPRNRPVESGNHA 345
+ I + + P ++ +S GG G D+SS P G A
Sbjct: 221 AYSIQGQH-TISPLDLAKLNQVARQQSHFAMMHGGTGFAGIDSSS-------PEVKGYWA 272
Query: 346 AI--LTSTTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATEGVVMVSGT 403
++ T TT E+ IP + + G +N++ IRQ+SGA + + +P G++ V ++G+
Sbjct: 273 SLDASTQTTHELTIPNNLIGCIIGRQGANINEIRQMSGAQIKIANPVEGSSGRQVTITGS 332
Query: 404 SDQMRAAQSLIHA 416
+ + AQ LI+A
Sbjct: 333 AASISLAQYLINA 345
>gi|18071423|gb|AAL58282.1|AC068923_24 putative membrane-associated protein [Oryza sativa Japonica Group]
Length = 952
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/111 (36%), Positives = 72/111 (64%), Gaps = 3/111 (2%)
Query: 78 ETGASIKIADILPD-SEERIVVISARENSEMRHSPAQDAVMRVHSRIAEIGFEPGQAVVA 136
+TGA ++ ++ + SEER++V+S++E + SP +A++ +HS+ + + +
Sbjct: 548 QTGACGQVKEVGKNASEERLIVVSSQEIPDDPVSPTIEALILLHSKASTLA--ENHQLTT 605
Query: 137 RLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAPRCGSPHDEIVQ 187
RL+V S ++GC+LG GG +++EMRR TGA IRV+ K P+ S +E+VQ
Sbjct: 606 RLVVPSNKVGCILGEGGKVITEMRRRTGAEIRVYSKADKPKYLSFDEELVQ 656
Score = 46.6 bits (109), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 34/49 (69%)
Query: 370 NSNLSHIRQISGANVVVNDPKPGATEGVVMVSGTSDQMRAAQSLIHAFI 418
N +LS + ISGA V +++ PG++E +V + G DQ++AAQSL+ FI
Sbjct: 885 NWSLSLVLVISGARVKLHEAHPGSSESIVEIQGIPDQVKAAQSLLQGFI 933
>gi|387915508|gb|AFK11363.1| alphaCP-3 [Callorhinchus milii]
Length = 349
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 93/383 (24%), Positives = 156/383 (40%), Gaps = 75/383 (19%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMRH 109
+ +LL H +VGS+IGK G V+ + E+GA I I++ + ERIV I+
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE--GNCPERIVTITG-------- 63
Query: 110 SPAQDAVMRVHSRIAEIGFE----------PGQA---VVARLLVHSQQIGCLLGRGGHIV 156
DA+ + + IA FE P + V RL+V + Q G L+G+GG +
Sbjct: 64 --PTDAIFKAFAMIA-FKFEEDINNSMTNSPATSKPPVTLRLVVPASQCGSLIGKGGSKI 120
Query: 157 SEMRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKRP 216
E+R +TGA ++V D P + + V + G + DA+ ++ + ++ P
Sbjct: 121 KEIRESTGAQVQV-AGDMLP---NSTERAVTISG----MPDAIIQCVKQI--CVVMLESP 170
Query: 217 GPNNGHSYLPPFPEMPPPPFRPRHNPASPGSYPSPVGPFHSMDRGMGPSQPFDHQAAFSH 276
P+ P+RP+ P S P G + Q A H
Sbjct: 171 ------------PKGATIPYRPK-----PASAPVIFAG--------GQAYTIQGQCAIPH 205
Query: 277 GMDPMVPPNSDRIPFPYGSERPGHGPTFDRPPS---PRSWTPQGVGGGDPRGFDASSGFT 333
D + + R P P S +W P+ + G
Sbjct: 206 PDDACLLSAEYKTALTSTLWR---SPQLAHPSSQLKEAAWRPESLRG--------KMELK 254
Query: 334 PRNRPVESGNHAAILTSTTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGA 393
N E+ A ++T E+ IP + + G + ++ IRQ+SGA + + + G+
Sbjct: 255 NCNEESENWGMDANPQASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEGS 314
Query: 394 TEGVVMVSGTSDQMRAAQSLIHA 416
TE + ++G+ + AQ LI+A
Sbjct: 315 TERQITITGSPANISLAQYLINA 337
>gi|431893776|gb|ELK03594.1| Poly(rC)-binding protein 3 [Pteropus alecto]
Length = 339
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 95/390 (24%), Positives = 158/390 (40%), Gaps = 85/390 (21%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMRH 109
+ +LL H +VGS+IGK G V+ ++E+GA I I++ + ERIV I+
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMRDESGARINISE--GNCPERIVTITG-------- 63
Query: 110 SPAQDAVMRVHSRIA---------EIGFEPGQA---VVARLLVHSQQIGCLLGRGGHIVS 157
DA+ + + IA + P + V RL+V + Q G L+G+GG +
Sbjct: 64 --PTDAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIK 121
Query: 158 EMRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKRPG 217
E+R +TGA ++V D P + + V + G ++ + I + E+
Sbjct: 122 EIRESTGAQVQV-AGDMLP---NSTERAVTISGTPDAIIQCVKQICVVMLES-------- 169
Query: 218 PNNGHSYLPPFPEMPPPPFRPRHNPASPGSYPSPVGPFHSMDRGMGPSQPFDHQAAFSH- 276
P G + P+RP+ P S P + G + Q A H
Sbjct: 170 PPKGATI----------PYRPK-----PASTP--------VIFAGGQAYTIQGQYAIPHP 206
Query: 277 -GMDPMVPPNSDRIPF-PYGSERPGH-GPTFDRPPSPRSWTPQGVGGGDPRGFDASSGFT 333
+ + + PF P G P G S + G P G DAS
Sbjct: 207 DQLTKLHQLAMQQTPFPPLGQTNPAFPGEKLSLHSSEEAQNLM----GQPSGLDASP--- 259
Query: 334 PRNRPVESGNHAAILTSTTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGA 393
++T E+ IP + + G + ++ IRQ+SGA + + + G+
Sbjct: 260 ---------------PASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEGS 304
Query: 394 TEGVVMVSGTSDQMRAAQSLIHAFILCGVT 423
+E + ++GT + AQ LI+A + VT
Sbjct: 305 SERQITITGTPANISLAQYLINARLTSEVT 334
>gi|327263852|ref|XP_003216731.1| PREDICTED: poly(rC)-binding protein 2-like isoform 1 [Anolis
carolinensis]
Length = 360
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 95/370 (25%), Positives = 165/370 (44%), Gaps = 40/370 (10%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMR- 108
+ +LL H +VGS+IGK G V+ + E+GA I I++ + ERI+ ++ N+ +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISE--GNCPERIITLAGPTNAIFKA 71
Query: 109 HSPAQDAVMR-VHSRIAEIGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASI 167
+ D + + S + V RL+V + Q G L+G+GG + E+R +TGA +
Sbjct: 72 FAMIIDKLEEDISSSMTNSTASSRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQV 131
Query: 168 RVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKRPGPNNGHSYLPP 227
+V D P + + + + G S+ + + I + E+ P G +
Sbjct: 132 QV-AGDMLP---NSTERAITIAGIPQSIIECVKQICVVMLES--------PPKGVTI--- 176
Query: 228 FPEMPPPPFRPRHNPASPGSYPSPVGPFHSMDRGMGPSQPFDHQA-AFSHGMDPMVPPNS 286
P+RP+ P+S SPV DR S + H A + D PP
Sbjct: 177 -------PYRPK--PSS-----SPVIFAGGQDRYSSGSASYPHTAPSMCLNSDLEGPPQE 222
Query: 287 D-RIPFPYGSERPGHGPTFDRPPSPRSWTPQGVGGGDPRGFDASSGFTPRNRPVESGNHA 345
I Y +P + +S P G G ++SS P + +G A
Sbjct: 223 AYTIQGQYAIPQPDL-TKLHQLAMQQSHFPMSHGNTGFSGVESSS---PDEKGYWAGLDA 278
Query: 346 AILTSTTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATEGVVMVSGTSD 405
+ T T+ E+ IP + + G + ++ IRQ+SGA + + +P G+T+ V ++G++
Sbjct: 279 SAQT-TSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTITGSAA 337
Query: 406 QMRAAQSLIH 415
+ AQ LI+
Sbjct: 338 SISLAQYLIN 347
>gi|297262518|ref|XP_001105618.2| PREDICTED: poly(rC)-binding protein 2 isoform 2 [Macaca mulatta]
Length = 335
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 90/376 (23%), Positives = 151/376 (40%), Gaps = 77/376 (20%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMRH 109
+ +LL H +VGS+IGK G V+ + E+GA I I++ + ERI+ ++ N+ +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISE--GNCPERIITLAGPTNAIFK- 70
Query: 110 SPAQDAVMRVHSRIAEIGFEPGQA---------VVARLLVHSQQIGCLLGRGGHIVSEMR 160
A + ++ E+ F V RL+V + Q G L+G+GG + E+R
Sbjct: 71 -----AFAMIIDKLEEV-FSSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIR 124
Query: 161 RATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKRPGPNN 220
+TGA ++V D P + + + + G S+ + + I + ET+ P
Sbjct: 125 ESTGAQVQV-AGDMLP---NSTERAITIAGIPQSIIECVKQICVVMLETL----SQSPPK 176
Query: 221 GHSY-LPPFPEMPPPPFRPRHNPASPGSYPSPVGPFHSMDRGMGPSQPFDHQAAFSHGMD 279
G + P P P F G Y P P HQ A
Sbjct: 177 GVTIPYRPKPSSSPVIFAGGQAYTIQGQYAIP-----------QPDLTKLHQLAMQQSHF 225
Query: 280 PMVPPNSDRIPFPYGSERPGHGPTFDRPPSPRSWTPQGVGGGDPRGFDASSGFTPRNRPV 339
PM HG T GF +P +
Sbjct: 226 PMT-----------------HGNT---------------------GFSGIESSSPEVKGY 247
Query: 340 ESGNHAAILTSTTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATEGVVM 399
+G A+ T T+ E+ IP + + G + ++ IRQ+SGA + + +P G+T+ V
Sbjct: 248 WAGLDASAQT-TSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQVT 306
Query: 400 VSGTSDQMRAAQSLIH 415
++G++ + AQ LI+
Sbjct: 307 ITGSAASISLAQYLIN 322
>gi|417399108|gb|JAA46584.1| Putative polyc-binding alphacp-1 [Desmodus rotundus]
Length = 333
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 90/372 (24%), Positives = 150/372 (40%), Gaps = 68/372 (18%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMRH 109
+ +LL H +VGS+IGK G V+ + E+GA I I++ + ERI+ ++ N+ +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISE--GNCPERIITLAGPTNAIFKA 71
Query: 110 SPAQDAVMRVHSRIAEIGFEPGQA----VVARLLVHSQQIGCLLGRGGHIVSEMRRATGA 165
+ ++ I+ A V RL+V + Q G L+G+GG + E+R +TGA
Sbjct: 72 FAM--IIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGA 129
Query: 166 SIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKRPGPNNGHSY- 224
++V D P + + + + G S+ + + I + ET+ P G +
Sbjct: 130 QVQV-AGDMLP---NSTERAITIAGIPQSIIECVKQICVVMLETL----SQSPPKGVTIP 181
Query: 225 LPPFPEMPPPPFRPRHNPASPGSYPSPVGPFHSMDRGMGPSQPFDHQAAFSHGMDPMVPP 284
P P P F G Y P P HQ A PM
Sbjct: 182 YRPKPSSSPVIFAGGQAYTIQGQYAIP-----------QPDLTKLHQLAMQQSHFPMT-- 228
Query: 285 NSDRIPFPYGSERPGHGPTFDRPPSPRSWTPQGVGGGDPRGFDASSGFTPRNRPVESGNH 344
HG T GF +P + +
Sbjct: 229 ---------------HGNT---------------------GFSGIESSSPEVKGYWASLD 252
Query: 345 AAILTSTTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATEGVVMVSGTS 404
A+ T TT E+ IP + + G +N++ IRQ+SGA + + +P G++ V ++G++
Sbjct: 253 AS--TQTTHELTIPNNLIGCIIGRQGANINEIRQMSGAQIKIANPVEGSSGRQVTITGSA 310
Query: 405 DQMRAAQSLIHA 416
+ AQ LI+A
Sbjct: 311 ASISLAQYLINA 322
>gi|347300276|ref|NP_001231441.1| poly(rC) binding protein 2 [Sus scrofa]
gi|417399505|gb|JAA46755.1| Putative polyc-binding alphacp-1 [Desmodus rotundus]
Length = 353
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 94/378 (24%), Positives = 163/378 (43%), Gaps = 63/378 (16%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMRH 109
+ +LL H +VGS+IGK G V+ + E+GA I I++ + ERI+ ++ N+ +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISE--GNCPERIITLAGPTNAIFKA 71
Query: 110 SPAQDAVMRVHSRIAEIGFEPGQA----VVARLLVHSQQIGCLLGRGGHIVSEMRRATGA 165
+ ++ I+ A V RL+V + Q G L+G+GG + E+R +TGA
Sbjct: 72 FAM--IIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGA 129
Query: 166 SIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKRPGPNNGHSYL 225
++V D P + + + + G S+ + + I + ET+ S
Sbjct: 130 QVQV-AGDMLP---NSTERAITIAGIPQSIIECVKQICVVMLETL------------SQS 173
Query: 226 PPFPEMPPPPFRPRHNPASPGSYPSPVGPFHSMDRGMGPSQPFDHQAAFSHGMDPMVPPN 285
P P+ P+RP+ P+S SPV DR +S G
Sbjct: 174 P--PKGVTIPYRPK--PSS-----SPVIFAGGQDR-------------YSTG-------- 203
Query: 286 SDRIPFPYGSERPGHGPTFDRPPSPRSWTPQGVGGGDPRGFDASSGFTPRNR--PVESGN 343
SD FP+ + P + PP ++T QG + P+ GN
Sbjct: 204 SDSASFPHTTPSMCLNPDLEGPP-LEAYTIQGQYAIPQPDLTKLHQLAMQQSHFPMTHGN 262
Query: 344 HA------AILTSTTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATEGV 397
A +T+ E+ IP + + G + ++ IRQ+SGA + + +P G+T+
Sbjct: 263 TGFSAGLDASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQ 322
Query: 398 VMVSGTSDQMRAAQSLIH 415
V ++G++ + AQ LI+
Sbjct: 323 VTITGSAASISLAQYLIN 340
>gi|410922719|ref|XP_003974830.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K-like [Takifugu
rubripes]
Length = 434
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 99/416 (23%), Positives = 165/416 (39%), Gaps = 71/416 (17%)
Query: 47 EEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSE--ERIVVISAREN 104
+E V ++L G++IGKGG ++ + + AS+ + PDS ERI+ ISA
Sbjct: 40 DEMVELRILLQSKNAGAVIGKGGKNIKALRTDYKASVSV----PDSSGPERILSISADIK 95
Query: 105 SEMRHSPAQDAVMRVHSRIAEIGFEPGQAVVA--RLLVHSQQIGCLLGRGGHIVSEMRRA 162
+ + ++++ + E G RLL+H G ++G G + E+R
Sbjct: 96 T------VGEILLKIIPTLEEYQQYSGMDFDCELRLLIHQSLAGSIIGVKGAKIKELREN 149
Query: 163 TGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKRPGPNNGH 222
T SI++F + C D +V V G V + + +T+ + P G
Sbjct: 150 TKTSIKLFQE----CCPQSTDRVVLVGGKMERVVECI--------KTMLELIADAPIKGR 197
Query: 223 S--YLPPFPEMP------PPPFRPRHNPASP-GSYPSPVGPFHSMDRGMGPSQPFDHQAA 273
+ Y P F + F R P G +PS DRG F+ ++
Sbjct: 198 AQPYDPNFYDETYEYGGFTVMFEERVGGRRPMGGFPSRGNRSSGGDRG------FERMSS 251
Query: 274 FSHGMDPMVPPNSDRIPFPYGSERPGHGPTFDRPPSPRSWTPQGVG--GGDPRGFDASSG 331
G PM D P P H R S G GGD R +D+ G
Sbjct: 252 SRGGRGPMSSSRRDYDDSPRRGPPPPHSSRVSRGNSRGRNMSIGHSHRGGDDRYYDSYRG 311
Query: 332 FTPRN-----RP----------VESGN-----HAAILTS--------TTIEVVIPQLYMA 363
R+ RP ++G+ H+ S T +V IP+
Sbjct: 312 SDERSNDRRGRPDRYSDSMSGGYDNGSSWDNYHSGGRCSYNDIGGPVVTTQVTIPKDLAG 371
Query: 364 HVYGENNSNLSHIRQISGANVVVNDPKPGATEGVVMVSGTSDQMRAAQSLIHAFIL 419
+ G+ + IR SGA + +++P G+ + ++ ++GT DQ++ AQ L+ + +L
Sbjct: 372 SIIGKGGQRIKQIRHDSGAAIKIDEPLEGSEDRIITITGTQDQIQNAQFLLQSSVL 427
Score = 43.1 bits (100), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 45/83 (54%), Gaps = 4/83 (4%)
Query: 26 SRGYSSGPGHETVGGRNRMFYEE----EVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGA 81
S GY +G + R Y + V ++ D GS+IGKGG ++ ++++GA
Sbjct: 331 SGGYDNGSSWDNYHSGGRCSYNDIGGPVVTTQVTIPKDLAGSIIGKGGQRIKQIRHDSGA 390
Query: 82 SIKIADILPDSEERIVVISAREN 104
+IKI + L SE+RI+ I+ ++
Sbjct: 391 AIKIDEPLEGSEDRIITITGTQD 413
>gi|351697348|gb|EHB00267.1| Poly(rC)-binding protein 3 [Heterocephalus glaber]
Length = 427
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 104/402 (25%), Positives = 163/402 (40%), Gaps = 96/402 (23%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMRH 109
+ +LL H +VGS+IGK G V+ + E+GA I I++ + ERIV I+
Sbjct: 89 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE--GNCPERIVTITG-------- 138
Query: 110 SPAQDAVMRVHSRIA---------EIGFEPGQA---VVARLLVHSQQIGCLLGRGGHIVS 157
DA+ + + IA + P + V RL+V + Q G L+G+GG +
Sbjct: 139 --PTDAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIK 196
Query: 158 EMRRATGASIRVFPKDQAPR--------CGSPHDEIVQVIGNYHSVQDALFHITSRLRET 209
E+R +TGA ++V D P G+P D I+Q + Q + + S +
Sbjct: 197 EIRESTGAQVQV-AGDMLPNSTERAVTISGTP-DAIIQCVK-----QICVVMLESPPKGA 249
Query: 210 IFPMKRPGPNN-------GHSYLPPFPEMPPPPFRPRHNPASPGSY-PSPVGPFHSMDRG 261
P RP P + G +Y P P +P + G Y PS + +
Sbjct: 250 TIPY-RPKPASTPVIFAGGQAYTIQGQYAIPHP-----DPLAHGLYQPSAILQLTKL--- 300
Query: 262 MGPSQPFDHQAAFSHGMDPMVPPNSDRIPFPYGSERPGHGPTFDRPPSPRSWTPQGVGGG 321
HQ A P P FP G + P H S Q + G
Sbjct: 301 --------HQLAMQQ--TPFPPLGQTNPAFP-GEKLPLHS----------SEEAQNLMGQ 339
Query: 322 DPRGFDASSGFTPRNRPVESGNHAAILTSTTIEVVIPQLYMAHVYGENNSNLSHIRQISG 381
P G DAS ++T E+ IP + + G + ++ IRQ+SG
Sbjct: 340 SP-GLDASP------------------PASTHELTIPNDLIGCIIGRQGTKINEIRQMSG 380
Query: 382 ANVVVNDPKPGATEGVVMVSGTSDQMRAAQSLIHAFILCGVT 423
A + + + G++E + ++GT + AQ LI+A + VT
Sbjct: 381 AQIKIANATEGSSERQITITGTPANISLAQYLINARLTSEVT 422
>gi|9957161|gb|AAG09238.1|AF176327_1 alphaCP-3 [Mus musculus]
Length = 339
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 100/387 (25%), Positives = 154/387 (39%), Gaps = 79/387 (20%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMRH 109
+ +LL H +VGS+IGK G V+ + E+GA I I++ + ERIV I+
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE--GNCPERIVTITG-------- 63
Query: 110 SPAQDAVMRVHSRIA---------EIGFEPGQA---VVARLLVHSQQIGCLLGRGGHIVS 157
DA+ + + IA + P + V RL+V + Q G L+G+GG +
Sbjct: 64 --PTDAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIK 121
Query: 158 EMRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKRPG 217
E+R +TGA ++V D P + + V + G DA+F +++ M
Sbjct: 122 EIRESTGAQVQV-AGDMLP---NSTERAVTISGT----PDAIFQC---VKQICVVMLESP 170
Query: 218 PNNGHSYLPPFPEMPPPPFRPRHNPASPGSYPSPVGPFHSMDRGMGPSQPFD-HQAAFSH 276
P P P P F G Y P H P Q HQ A
Sbjct: 171 PKGATIPYRPKPACTPVIFAGGQAYTIQGQYAIP----H-------PDQLTKLHQLAMQQ 219
Query: 277 GMDPMVPPNSDRIPFPYGSERPGHGPTFDRPPSPRSWTPQGVGGGDPRGFDASSGFTPRN 336
P P FP G + P H S Q + G G DAS
Sbjct: 220 --TPFPPLGQTNPAFP-GEKLPLHS----------SEEAQNL-MGQSSGLDASP------ 259
Query: 337 RPVESGNHAAILTSTTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATEG 396
++T E+ IP + + G + ++ IRQ+SGA + + + G++E
Sbjct: 260 ------------PASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEGSSER 307
Query: 397 VVMVSGTSDQMRAAQSLIHAFILCGVT 423
+ ++GT + AQ LI+A + VT
Sbjct: 308 QITITGTPANISLAQYLINARLTSEVT 334
>gi|432906521|ref|XP_004077571.1| PREDICTED: poly(rC)-binding protein 3-like [Oryzias latipes]
Length = 434
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 96/382 (25%), Positives = 154/382 (40%), Gaps = 95/382 (24%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMRH 109
+ +LL H +VGS+IGK G V+ + E+GA I I++ S ERIV I+
Sbjct: 17 LTLRLLMHGKEVGSIIGKKGETVKKMREESGARINISE--GSSPERIVTITG-------- 66
Query: 110 SPAQDAVMRVHSRIAEIGFEPGQA------------VVARLLVHSQQIGCLLGRGGHIVS 157
+ + R S IA+ E A V RL+ Q G L+G+GG +
Sbjct: 67 --PTEGIFRAFSMIAQKFEEDITAAMTNSNVTSKPPVTLRLVFPGSQCGSLIGKGGSKIK 124
Query: 158 EMRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKRPG 217
E+R TGA ++V D P + V + G ++ + HI S + E+
Sbjct: 125 EIRETTGAQVQV-AGDMLP---DSTERAVTISGTPQAITQCVRHICSVMLES-------- 172
Query: 218 PNNGHSYLPPFPEMPPPPFRPRHNPASPGSYPSPVGPFHSMDRGMGPSQ-PFDHQAAFSH 276
P G + P+RP+ PA G++ + + P HS P Q F HQ
Sbjct: 173 PPKGATI----------PYRPKILPA--GAH-AVLAPQHSAHAFAIPGQYAFAHQ----- 214
Query: 277 GMDPMVPPNSDRIPFPYGSERPGHGPTFDRPPSPRSWTPQGVGGGDPRGFDASSGFTPRN 336
+ + IP P + PTF G D+S+
Sbjct: 215 DLTKLHQLAMQHIPLPSLGQS---NPTFP-------------------GLDSSA------ 246
Query: 337 RPVESGNHAAILTSTTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATEG 396
+++T E+ IP + + G S ++ IRQ+SGA++ + G+
Sbjct: 247 ------------STSTQELAIPNDLIGCIIGRQGSKINEIRQVSGAHIKIASATDGSAVR 294
Query: 397 VVMVSGTSDQMRAAQSLIHAFI 418
V ++G+ + AQ LI+A +
Sbjct: 295 QVTITGSPASISIAQYLINASL 316
>gi|397521979|ref|XP_003846057.1| PREDICTED: LOW QUALITY PROTEIN: poly(rC)-binding protein 2 [Pan
paniscus]
Length = 465
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 94/396 (23%), Positives = 167/396 (42%), Gaps = 85/396 (21%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMRH 109
+ +LL H +VGS+IGK G V+ + E+GA I I++ + ERI+ ++ N+ +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISE--GNCPERIITLAGPTNAIFKA 71
Query: 110 SPAQDAVMRVHSRIAEIGFEPGQA----VVARLLVHSQQIGCLLGRGGHIVSEMRRATGA 165
+ ++ I+ A V RL+V + Q G L+G+GG + E+R +TGA
Sbjct: 72 FAM--IIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGA 129
Query: 166 SIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKRPGPNNGHSYL 225
++V D P + + + + G S+ + + I + E+
Sbjct: 130 QVQV-AGDMLP---NSTERAITIAGIPQSIIECVKQICVVMLES---------------- 169
Query: 226 PPFPEMPPPPFRPRHNPASPGSYPSPVGPFHSMDRGMGPSQPFDHQAAFSHGMDPMVPPN 285
P+ P+RP+ P+S SPV DR +S G
Sbjct: 170 ---PKGVTIPYRPK--PSS-----SPVIFAGGQDR-------------YSTG-------- 198
Query: 286 SDRIPFPYGSERPGHGPTFDRPPSPRSWTPQG-----------------------VGGGD 322
SD FP+ + P + PP ++T QG + G+
Sbjct: 199 SDSASFPHTTPSMCLNPDLEGPPL-EAYTIQGQYAIPQPDLTKLHQLAMQQSHFPMTHGN 257
Query: 323 PRGFDASSGFTPRNRPVESGNHAAILTSTTIEVVIPQLYMAHVYGENNSNLSHIRQISGA 382
GF +P + +G A+ T T+ E+ IP + + G + ++ IRQ+SGA
Sbjct: 258 -TGFSGIESSSPEVKGYWAGLDASAQT-TSHELTIPNDLIGCIIGRQGAKINEIRQMSGA 315
Query: 383 NVVVNDPKPGATEGVVMVSGTSDQMRAAQSLIHAFI 418
+ + +P G+T+ V ++G++ + AQ LI+ +
Sbjct: 316 QIKIANPVEGSTDRQVTITGSAASISLAQYLINVSL 351
>gi|193083112|ref|NP_001122385.1| poly(rC)-binding protein 2 isoform f [Homo sapiens]
gi|66911068|gb|AAH97410.1| Pcbp2 protein [Rattus norvegicus]
gi|78395095|gb|AAI07689.1| PCBP2 protein [Homo sapiens]
gi|417399138|gb|JAA46599.1| Putative polyc-binding alphacp-1 [Desmodus rotundus]
Length = 335
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 89/371 (23%), Positives = 150/371 (40%), Gaps = 67/371 (18%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMRH 109
+ +LL H +VGS+IGK G V+ + E+GA I I++ + ERI+ ++ N+ +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISE--GNCPERIITLAGPTNAIFKA 71
Query: 110 SPAQDAVMRVHSRIAEIGFEPGQA----VVARLLVHSQQIGCLLGRGGHIVSEMRRATGA 165
+ ++ I+ A V RL+V + Q G L+G+GG + E+R +TGA
Sbjct: 72 FAM--IIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGA 129
Query: 166 SIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKRPGPNNGHSY- 224
++V D P + + + + G S+ + + I + ET+ P G +
Sbjct: 130 QVQV-AGDMLP---NSTERAITIAGIPQSIIECVKQICVVMLETL----SQSPPKGVTIP 181
Query: 225 LPPFPEMPPPPFRPRHNPASPGSYPSPVGPFHSMDRGMGPSQPFDHQAAFSHGMDPMVPP 284
P P P F G Y P P HQ A PM
Sbjct: 182 YRPKPSSSPVIFAGGQAYTIQGQYAIP-----------QPDLTKLHQLAMQQSHFPMT-- 228
Query: 285 NSDRIPFPYGSERPGHGPTFDRPPSPRSWTPQGVGGGDPRGFDASSGFTPRNRPVESGNH 344
HG T GF +P + +G
Sbjct: 229 ---------------HGNT---------------------GFSGIESSSPEVKGYWAGLD 252
Query: 345 AAILTSTTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATEGVVMVSGTS 404
A+ T T+ E+ IP + + G + ++ IRQ+SGA + + +P G+T+ V ++G++
Sbjct: 253 ASAQT-TSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTITGSA 311
Query: 405 DQMRAAQSLIH 415
+ AQ LI+
Sbjct: 312 ASISLAQYLIN 322
>gi|395536907|ref|XP_003770450.1| PREDICTED: poly(rC)-binding protein 3 isoform 1 [Sarcophilus
harrisii]
Length = 339
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 97/390 (24%), Positives = 159/390 (40%), Gaps = 85/390 (21%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMRH 109
+ +LL H +VGS+IGK G V+ + E+GA I I++ + ERIV I+
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE--GNCPERIVTITG-------- 63
Query: 110 SPAQDAVMRVHSRIAEIGFEPGQA-------------VVARLLVHSQQIGCLLGRGGHIV 156
DA+ + + IA FE V RL+V + Q G L+G+GG +
Sbjct: 64 --PTDAIFKAFAMIA-YKFEEDIINSMSNSTATSKPPVTLRLVVPASQCGSLIGKGGSKI 120
Query: 157 SEMRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKRP 216
E+R +TGA ++V D P + + V + G ++ + I + E+
Sbjct: 121 KEIRESTGAQVQV-AGDMLP---NSTERAVTISGTPDAIIQCVKQICVVMLES------- 169
Query: 217 GPNNGHSYLPPFPEMPPPPFRPRHNPASPGSYPSPVGPFHSMDRGMGPSQPFDHQAAFSH 276
P G + P+RP+ P S P + G + Q A H
Sbjct: 170 -PPKGATI----------PYRPK-----PASTP--------VIFAGGQAYTIQGQYAIPH 205
Query: 277 --GMDPMVPPNSDRIPF-PYGSERPGHGPTFDRPPSPRSWTPQGVGGGDPRGFDASSGFT 333
+ + + PF P G P ++ P S Q + G P G DAS
Sbjct: 206 PDQLTKLHQLAMQQTPFPPLGQTTPAF--PGEKLPLHSSEEAQNLMGQSP-GLDASP--- 259
Query: 334 PRNRPVESGNHAAILTSTTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGA 393
++T E+ IP + + G + ++ IRQ+SGA + + + G+
Sbjct: 260 ---------------PASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEGS 304
Query: 394 TEGVVMVSGTSDQMRAAQSLIHAFILCGVT 423
+E + ++GT + AQ LI+A + VT
Sbjct: 305 SERQITITGTPANISLAQYLINARLTSEVT 334
>gi|242048332|ref|XP_002461912.1| hypothetical protein SORBIDRAFT_02g010550 [Sorghum bicolor]
gi|241925289|gb|EER98433.1| hypothetical protein SORBIDRAFT_02g010550 [Sorghum bicolor]
Length = 579
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 94/357 (26%), Positives = 144/357 (40%), Gaps = 68/357 (19%)
Query: 105 SEMRHSPAQDAVMRVHSRIAEIGF---EPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRR 161
SE+ AQ +V + H G+ + Q V RLL+ + G L+G+ G I+ +
Sbjct: 250 SEVSTEFAQGSVAKTHCPEGNTGYVQSKTLQQVSFRLLLPTYLAGGLIGKRGLIIKGIED 309
Query: 162 ATGASIRVFPKDQAPRCGSPHDEI----VQVIGNYHSVQDALFHITSRLRETIFPMKRPG 217
TGA I V AP G I +++ G ++++AL + +LR IF
Sbjct: 310 ETGACIDV----GAPVTGCKERVITICALEITGEQVNIRNALSLVCWKLRNHIFS-NETD 364
Query: 218 PNNGHSYLPPFPEMPPPPFRPRHNPASPGSYPSPVGPFHSMDRGMGPSQPFDHQAAFSHG 277
NN H E+ + N S Y SMD + DH + S+G
Sbjct: 365 YNNSH---ISSSEIASSNATNQANNYSTSQY--------SMDN----AHKVDHGPSLSYG 409
Query: 278 MDPMVPPNSD------RIPF-------------------PYGSERP--GHGPTFDRPPS- 309
+D + SD I P G +P G+G + S
Sbjct: 410 VDSVEKSFSDLELSSSEIQLGSLGVQGLKVRGSNSHHFEPMGRMKPDNGNGVRINNSDSG 469
Query: 310 ---PRSWTPQGVGGGDPRGFDASSG--FTPRNRPVESGNHAAILTSTTIEVVIPQLYMAH 364
P W D + + G F+ N V HA+I T T E + +
Sbjct: 470 IQNPTEWN-------DIVTNNLNHGIIFSEENNLVRGVEHASI-TRITYETAVSGSILTL 521
Query: 365 VYGENNSNLSHIRQISGANVVVNDPKPGATEGVVMVSGTSDQMRAAQSLIHAFILCG 421
VYG+N SNL+ + ++SGA++ V +P E +++VSG DQ ++AQ L+ IL G
Sbjct: 522 VYGDNGSNLAKLTEVSGADIAVYNPPSEGNEAMIVVSGPPDQAQSAQRLLVELILQG 578
Score = 42.4 bits (98), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 33/56 (58%)
Query: 48 EEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARE 103
++V F+LL G LIGK G I++ ++ETGA I + + +ER++ I A E
Sbjct: 280 QQVSFRLLLPTYLAGGLIGKRGLIIKGIEDETGACIDVGAPVTGCKERVITICALE 335
>gi|363747261|ref|XP_003643959.1| PREDICTED: poly(rC)-binding protein 2-like isoform 1 [Gallus
gallus]
Length = 348
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 92/376 (24%), Positives = 163/376 (43%), Gaps = 53/376 (14%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMRH 109
+ +LL H +VGS+IGK G V+ + E+GA I I++ + ERI+ ++ N+ +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISE--GNCPERIITLAGPTNAIFKA 71
Query: 110 SPAQDAVMRVHSRIAEIGFEPGQA----VVARLLVHSQQIGCLLGRGGHIVSEMRRATGA 165
+ ++ I+ A V RL+V + Q G L+G+GG + E+R +TGA
Sbjct: 72 FAM--IIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGA 129
Query: 166 SIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKRPGPNNGHSYL 225
++V D P + + + + G S+ + + I + E+ P G +
Sbjct: 130 QVQV-AGDMLP---NSTERAITIAGIPQSIIECVKQICVVMLES--------PPKGVTI- 176
Query: 226 PPFPEMPPPPFRPRHNPASPGSYPSPVGPFHSMDRGMGPSQPFDHQA-AFSHGMDPMVPP 284
P+RP+ P+S SPV DR S + H A + D PP
Sbjct: 177 ---------PYRPK--PSS-----SPVIFAGGQDRYSSGSASYPHTAPSMCLNSDLEGPP 220
Query: 285 NSD-RIPFPYGSERPGHGPTFDRPPSPRSWTPQGVGGGDPRGFDASS----GFTPRNRPV 339
I Y +P + +S P G G ++SS G+ +
Sbjct: 221 QEAYTIQGQYAIPQPDL-TKLHQLAMQQSHFPMSHGNTGFSGIESSSPEVKGYWGLDASA 279
Query: 340 ESGNHAAILTSTTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATEGVVM 399
++ +H E+ IP + + G + ++ IRQ+SGA + + +P G+T+ V
Sbjct: 280 QTTSH---------ELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQVT 330
Query: 400 VSGTSDQMRAAQSLIH 415
++G++ + AQ LI+
Sbjct: 331 ITGSAASISLAQYLIN 346
>gi|392884376|gb|AFM91020.1| poly(rC) binding protein 3, isoform CRAb [Callorhinchus milii]
Length = 349
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 94/390 (24%), Positives = 159/390 (40%), Gaps = 75/390 (19%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMRH 109
+ +LL H +VGS+IGK G V+ + E+GA I I++ + ERIV I+
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMRVESGARINISE--GNCPERIVTITG-------- 63
Query: 110 SPAQDAVMRVHSRIAEIGFE----------PGQA---VVARLLVHSQQIGCLLGRGGHIV 156
DA+ + + IA FE P + V RL+V + Q G L+G+GG +
Sbjct: 64 --PTDAIFKAFAMIA-FKFEEDINNSMTNSPATSKPPVTLRLVVPASQCGSLIGKGGSKI 120
Query: 157 SEMRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKRP 216
E+R +TGA ++V D P + + V + G + DA+ ++ + ++ P
Sbjct: 121 KEIRESTGAQVQV-AGDMLP---NSTERAVTISG----MPDAIIQCVKQI--CVVMLESP 170
Query: 217 GPNNGHSYLPPFPEMPPPPFRPRHNPASPGSYPSPVGPFHSMDRGMGPSQPFDHQAAFSH 276
P+ P+RP+ P S P G + Q A H
Sbjct: 171 ------------PKGATIPYRPK-----PASAPVIFAG--------GQAYTIQGQYAIPH 205
Query: 277 GMDPMVPPNSDRIPFPYGSERPGHGPTFDRPPS---PRSWTPQGVGGGDPRGFDASSGFT 333
D + + R P P S +W P+ + G
Sbjct: 206 PDDACLLSAEYKTALTSTLWR---SPQLAHPSSQLKEAAWRPESLRG--------KMELK 254
Query: 334 PRNRPVESGNHAAILTSTTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGA 393
N E+ A ++T E+ IP + + G + ++ IRQ+SGA + + + G+
Sbjct: 255 NCNEESENWGMDANPQASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEGS 314
Query: 394 TEGVVMVSGTSDQMRAAQSLIHAFILCGVT 423
TE + ++G+ + AQ LI+A + V+
Sbjct: 315 TERQITITGSPANISLAQYLINARLTSEVS 344
>gi|294460692|gb|ADE75920.1| unknown [Picea sitchensis]
Length = 199
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 40/100 (40%), Positives = 64/100 (64%), Gaps = 4/100 (4%)
Query: 325 GFDASSGFTPRNRPVESGNHAAI---LTSTTIEVVIPQLYMAHVYGENNSNLSHIRQISG 381
G+D G++ +R +SG +++TT+EV IP+ + V G+ SN+ HIR+ISG
Sbjct: 88 GYDPIQGYSS-SRTTDSGFSGGFPKNVSTTTVEVTIPKNAVGSVLGKRGSNIQHIREISG 146
Query: 382 ANVVVNDPKPGATEGVVMVSGTSDQMRAAQSLIHAFILCG 421
A V ++D + GA++ V+ +SGT +Q AA+SL+ AFI G
Sbjct: 147 AKVKLHDSESGASDRVIEISGTPEQTHAAKSLLQAFIATG 186
>gi|14141166|ref|NP_114366.1| poly(rC)-binding protein 2 isoform b [Homo sapiens]
gi|157041229|ref|NP_001096635.1| poly(rC)-binding protein 2 isoform 1 [Mus musculus]
gi|73996203|ref|XP_534789.2| PREDICTED: poly(rC)-binding protein 2 isoform 1 [Canis lupus
familiaris]
gi|149714829|ref|XP_001504573.1| PREDICTED: poly(rC)-binding protein 2 isoform 1 [Equus caballus]
gi|297692024|ref|XP_002823365.1| PREDICTED: poly(rC)-binding protein 2 isoform 1 [Pongo abelii]
gi|301775803|ref|XP_002923308.1| PREDICTED: poly(rC)-binding protein 2-like [Ailuropoda melanoleuca]
gi|332206039|ref|XP_003252097.1| PREDICTED: poly(rC)-binding protein 2 isoform 1 [Nomascus
leucogenys]
gi|332839234|ref|XP_003313706.1| PREDICTED: poly(rC)-binding protein 2 isoform 1 [Pan troglodytes]
gi|395541533|ref|XP_003772697.1| PREDICTED: poly(rC)-binding protein 2 [Sarcophilus harrisii]
gi|403296804|ref|XP_003939285.1| PREDICTED: poly(rC)-binding protein 2 [Saimiri boliviensis
boliviensis]
gi|410964553|ref|XP_003988818.1| PREDICTED: poly(rC)-binding protein 2 isoform 2 [Felis catus]
gi|426224368|ref|XP_004006343.1| PREDICTED: poly(rC)-binding protein 2 isoform 1 [Ovis aries]
gi|426372753|ref|XP_004053282.1| PREDICTED: poly(rC)-binding protein 2 isoform 1 [Gorilla gorilla
gorilla]
gi|2500577|sp|Q61990.1|PCBP2_MOUSE RecName: Full=Poly(rC)-binding protein 2; AltName: Full=Alpha-CP2;
AltName: Full=CTBP; Short=CBP; AltName: Full=Putative
heterogeneous nuclear ribonucleoprotein X; Short=hnRNP X
gi|436894|gb|AAA03705.1| nucleic acid binding protein [Mus musculus]
gi|12654635|gb|AAH01155.1| Poly(rC) binding protein 2 [Homo sapiens]
gi|13172240|gb|AAK14059.1| alpha-CP2 [Mus musculus]
gi|50925529|gb|AAH78909.1| Pcbp2 protein [Rattus norvegicus]
gi|119617113|gb|EAW96707.1| poly(rC) binding protein 2, isoform CRA_b [Homo sapiens]
gi|148672029|gb|EDL03976.1| poly(rC) binding protein 2, isoform CRA_c [Mus musculus]
gi|149031920|gb|EDL86832.1| rCG50739, isoform CRA_a [Rattus norvegicus]
gi|158257714|dbj|BAF84830.1| unnamed protein product [Homo sapiens]
Length = 362
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 95/393 (24%), Positives = 167/393 (42%), Gaps = 84/393 (21%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMRH 109
+ +LL H +VGS+IGK G V+ + E+GA I I++ + ERI+ ++ N+ +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISE--GNCPERIITLAGPTNAIFKA 71
Query: 110 SPAQDAVMRVHSRIAEIGFEPGQA----VVARLLVHSQQIGCLLGRGGHIVSEMRRATGA 165
+ ++ I+ A V RL+V + Q G L+G+GG + E+R +TGA
Sbjct: 72 FAM--IIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGA 129
Query: 166 SIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKRPGPNNGHSYL 225
++V D P + + + + G S+ + + I + E+ P G +
Sbjct: 130 QVQV-AGDMLP---NSTERAITIAGIPQSIIECVKQICVVMLES--------PPKGVTI- 176
Query: 226 PPFPEMPPPPFRPRHNPASPGSYPSPVGPFHSMDRGMGPSQPFDHQAAFSHGMDPMVPPN 285
P+RP+ P+S SPV DR +S G
Sbjct: 177 ---------PYRPK--PSS-----SPVIFAGGQDR-------------YSTG-------- 199
Query: 286 SDRIPFPYGSERPGHGPTFDRPPSPRSWTPQG-----------------------VGGGD 322
SD FP+ + P + PP ++T QG + G+
Sbjct: 200 SDSASFPHTTPSMCLNPDLEGPP-LEAYTIQGQYAIPQPDLTKLHQLAMQQSHFPMTHGN 258
Query: 323 PRGFDASSGFTPRNRPVESGNHAAILTSTTIEVVIPQLYMAHVYGENNSNLSHIRQISGA 382
GF +P + +G A+ T T+ E+ IP + + G + ++ IRQ+SGA
Sbjct: 259 -TGFSGIESSSPEVKGYWAGLDASAQT-TSHELTIPNDLIGCIIGRQGAKINEIRQMSGA 316
Query: 383 NVVVNDPKPGATEGVVMVSGTSDQMRAAQSLIH 415
+ + +P G+T+ V ++G++ + AQ LI+
Sbjct: 317 QIKIANPVEGSTDRQVTITGSAASISLAQYLIN 349
>gi|321455064|gb|EFX66209.1| hypothetical protein DAPPUDRAFT_332423 [Daphnia pulex]
Length = 384
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 55/165 (33%), Positives = 82/165 (49%), Gaps = 20/165 (12%)
Query: 52 FKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSE--ERIVVI----SARENS 105
+LL + GS+IGKGGS + + E A+I +LPD ERI+ I A N
Sbjct: 35 LRLLVYSKVAGSIIGKGGSNISKLRTENHATI----LLPDCPGPERILTIQGNLDAVINV 90
Query: 106 EMRHSPAQDAVMRVH-SRIAEIGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATG 164
P+ + V ++ R +G ARLLVH QIGC++GRGG V E+R +TG
Sbjct: 91 LQNVLPSLEEVSKIRGERTGRVGDSD-----ARLLVHQSQIGCIIGRGGAKVKELRESTG 145
Query: 165 ASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRET 209
I V+ + C D IVQ++G + + I + ++E+
Sbjct: 146 TRITVY----SVCCPRSTDRIVQILGKPSDCGECIKQIIALVKES 186
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 43/69 (62%)
Query: 350 STTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATEGVVMVSGTSDQMRA 409
+ T +V IP+ + G+ + + IR SGA++ +++P+PG+TE ++ +SG+S Q+
Sbjct: 306 TETTQVSIPKDLAGAIIGKGGARIRKIRGDSGASITIDEPRPGSTERIITISGSSHQIWK 365
Query: 410 AQSLIHAFI 418
AQ L+ +
Sbjct: 366 AQYLLQQSV 374
Score = 44.7 bits (104), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 51/106 (48%), Gaps = 15/106 (14%)
Query: 10 PAAEPFHQRGYAPGYHSRGY----SSGPGHETVGGRNRMFYEEEV----------VFKLL 55
P + P H RGY G + R G G GG M+++E + ++
Sbjct: 254 PLSPPRH-RGYRAGSYERDLPPPSLMGVGQPVRGGPGGMYHDERIFREDDRGHTETTQVS 312
Query: 56 CHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISA 101
D G++IGKGG+ +R + ++GASI I + P S ERI+ IS
Sbjct: 313 IPKDLAGAIIGKGGARIRKIRGDSGASITIDEPRPGSTERIITISG 358
>gi|149036630|gb|EDL91248.1| similar to Pol(yrC)-binding protein 1 (Alpha-CP1) (hnRNP-E1)
(predicted) [Rattus norvegicus]
Length = 337
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 90/365 (24%), Positives = 154/365 (42%), Gaps = 45/365 (12%)
Query: 57 HLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMR-HSPAQDA 115
H +VGS+IGK G V+ + E+GA I I++ + ERI+ ++ N+ + + D
Sbjct: 2 HGKEVGSIIGKKGESVKRIREESGARINISE--GNCPERIITLTGPTNAIFKAFAMIIDK 59
Query: 116 VMR-VHSRIAEIGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQ 174
+ ++S + V RL+V + Q G L+G+GG + E+R +TGA ++V D
Sbjct: 60 LEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQV-AGDM 118
Query: 175 APRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKRPGPNNGHSYLPPFPEMPPP 234
P + + + + G SV + + I + ET+ + + P P P
Sbjct: 119 LP---NSTERAITIAGVPQSVTECVKQICLVMLETL-------SQSPQGRVMTIPYQPMP 168
Query: 235 PFRPRHNPASPGSYPSPVGPFHSMDRGMGPSQPFD-HQAAFSHGMDPMVPPNSDRIPFPY 293
P G H+ GP P D + H + P+ D
Sbjct: 169 ASSPVICAGGQDRCSDAAGYPHATHDLEGP--PLDAYSIQGQHTISPL-----DLAKLNQ 221
Query: 294 GSERPGHGPTFDRPPSPRSWTPQGVGGGDPRGFDASSGFTPRNRPVESGNHAAI--LTST 351
+ + H GG G D+SS P G A++ T T
Sbjct: 222 VARQQSHFAMMH-------------GGTGFAGIDSSS-------PEVKGYWASLDASTQT 261
Query: 352 TIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATEGVVMVSGTSDQMRAAQ 411
T E+ IP + + G +N++ IRQ+SGA + + +P G++ V ++G++ + AQ
Sbjct: 262 THELTIPNNLIGCIIGRQGANINEIRQMSGAQIKIANPVEGSSGRQVTITGSAASISLAQ 321
Query: 412 SLIHA 416
LI+A
Sbjct: 322 YLINA 326
Score = 45.4 bits (106), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 34/52 (65%), Gaps = 1/52 (1%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIA-DILPDSEERIVVIS 100
V +L+ + GSLIGKGG ++ + TGA +++A D+LP+S ER + I+
Sbjct: 79 VTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIA 130
>gi|126345443|ref|XP_001362482.1| PREDICTED: poly(rC)-binding protein 2-like isoform 1 [Monodelphis
domestica]
gi|351706147|gb|EHB09066.1| Poly(rC)-binding protein 2 [Heterocephalus glaber]
gi|440900676|gb|ELR51755.1| Poly(rC)-binding protein 2, partial [Bos grunniens mutus]
Length = 351
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 95/393 (24%), Positives = 167/393 (42%), Gaps = 84/393 (21%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMRH 109
+ +LL H +VGS+IGK G V+ + E+GA I I++ + ERI+ ++ N+ +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISE--GNCPERIITLAGPTNAIFKA 71
Query: 110 SPAQDAVMRVHSRIAEIGFEPGQA----VVARLLVHSQQIGCLLGRGGHIVSEMRRATGA 165
+ ++ I+ A V RL+V + Q G L+G+GG + E+R +TGA
Sbjct: 72 FAM--IIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGA 129
Query: 166 SIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKRPGPNNGHSYL 225
++V D P + + + + G S+ + + I + E+ P G +
Sbjct: 130 QVQV-AGDMLP---NSTERAITIAGIPQSIIECVKQICVVMLES--------PPKGVTI- 176
Query: 226 PPFPEMPPPPFRPRHNPASPGSYPSPVGPFHSMDRGMGPSQPFDHQAAFSHGMDPMVPPN 285
P+RP+ P+S SPV DR +S G
Sbjct: 177 ---------PYRPK--PSS-----SPVIFAGGQDR-------------YSTG-------- 199
Query: 286 SDRIPFPYGSERPGHGPTFDRPPSPRSWTPQG-----------------------VGGGD 322
SD FP+ + P + PP ++T QG + G+
Sbjct: 200 SDSASFPHTTPSMCLNPDLEGPPL-EAYTIQGQYAIPQPDLTKLHQLAMQQSHFPMTHGN 258
Query: 323 PRGFDASSGFTPRNRPVESGNHAAILTSTTIEVVIPQLYMAHVYGENNSNLSHIRQISGA 382
GF +P + +G A+ T T+ E+ IP + + G + ++ IRQ+SGA
Sbjct: 259 -TGFSGIESSSPEVKGYWAGLDASAQT-TSHELTIPNDLIGCIIGRQGAKINEIRQMSGA 316
Query: 383 NVVVNDPKPGATEGVVMVSGTSDQMRAAQSLIH 415
+ + +P G+T+ V ++G++ + AQ LI+
Sbjct: 317 QIKIANPVEGSTDRQVTITGSAASISLAQYLIN 349
>gi|344266063|ref|XP_003405100.1| PREDICTED: poly(rC)-binding protein 2-like isoform 1 [Loxodonta
africana]
Length = 360
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 90/395 (22%), Positives = 155/395 (39%), Gaps = 90/395 (22%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMRH 109
+ +LL H +VGS+IGK G V+ + E+GA I I++ + ERI+ ++ N+ +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISE--GNCPERIITLAGPTNAIFKA 71
Query: 110 SPAQDAVMRVHSRIAEIGFEPGQA----VVARLLVHSQQIGCLLGRGGHIVSEMRRATGA 165
+ ++ I+ A V RL+V + Q G L+G+GG + E+R +TGA
Sbjct: 72 FAM--IIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGA 129
Query: 166 SIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITS------------------RLR 207
++V D P + + + + G S+ + + I RL+
Sbjct: 130 QVQV-AGDMLP---NSTERAITIAGIPQSIIECVKQICVVMLEVSPQAPPKLQCIPWRLK 185
Query: 208 ETIFPMKRPGPNNGHSYLPPF-------PEMPPPPFRPRHNPASPGSYPSPVGPFHSMDR 260
+I+P R + + P P++ PP G Y P
Sbjct: 186 SSIYPQDRYSTGSDSASFPHTTPSMCLNPDLEGPPLEAY---TIQGQYAIP--------- 233
Query: 261 GMGPSQPFDHQAAFSHGMDPMVPPNSDRIPFPYGSERPGHGPTFDRPPSPRSWTPQGVGG 320
P HQ A PM HG T
Sbjct: 234 --QPDLTKLHQLAMQQSHFPMT-----------------HGNT----------------- 257
Query: 321 GDPRGFDASSGFTPRNRPVESGNHAAILTSTTIEVVIPQLYMAHVYGENNSNLSHIRQIS 380
GF +P + +G A+ T T+ E+ IP + + G + ++ IRQ+S
Sbjct: 258 ----GFSGIESSSPEVKGYWAGLDASAQT-TSHELTIPNDLIGCIIGRQGAKINEIRQMS 312
Query: 381 GANVVVNDPKPGATEGVVMVSGTSDQMRAAQSLIH 415
GA + + +P G+T+ V ++G++ + AQ LI+
Sbjct: 313 GAQIKIANPVEGSTDRQVTITGSAASISLAQYLIN 347
>gi|212275472|ref|NP_001130567.1| uncharacterized protein LOC100191666 [Zea mays]
gi|194689502|gb|ACF78835.1| unknown [Zea mays]
gi|413934214|gb|AFW68765.1| hypothetical protein ZEAMMB73_642279 [Zea mays]
Length = 580
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 94/211 (44%), Gaps = 16/211 (7%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMRH 109
VF++L KVG++IG G VR ET A ++I + E+ V+I RE +
Sbjct: 55 TVFRMLIPAQKVGAIIGHKGERVRRLCEETRACVRIIGGHLCAAEQAVIIFGREQLDEPL 114
Query: 110 SPAQDAVMRVHSRIAE---IGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGAS 166
PA DA++RV+ + + P +V R+L S+Q L+G G +++ + A+
Sbjct: 115 PPAMDALLRVYQQTINNDSLDVGPDNVIVRRILAPSEQAASLIGEHGVMINSIMEASQTD 174
Query: 167 IRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKRPGPNNGHSYLP 226
IRV D P D ++++ G+ V AL + S LR+ + S +P
Sbjct: 175 IRVL-DDDLPPVALEEDRVIEIWGSPAGVYKALELVASHLRKYLV---------DRSVIP 224
Query: 227 PFPEMPPPPFRPRHNPASPGSYPS-PVGPFH 256
F P P H P Y P GP H
Sbjct: 225 LFDRYVPMPI--LHMDMPPCHYIDYPEGPVH 253
>gi|213511793|ref|NP_001133381.1| poly(rC)-binding protein 2 [Salmo salar]
gi|209152662|gb|ACI33123.1| PolyrC-binding protein 2 [Salmo salar]
Length = 327
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 89/379 (23%), Positives = 158/379 (41%), Gaps = 89/379 (23%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMRH 109
+ +LL H +VGS+IGK G V+ + E+GA I I++ + ERI+ ++
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISE--GNCPERIITLAG-------- 63
Query: 110 SPAQDAVMRVHSRIAEIGFEPGQA------------VVARLLVHSQQIGCLLGRGGHIVS 157
A+ + S I E E + V R++V + Q G L+G+GG +
Sbjct: 64 --PTTAIFKAFSMIIEKLEEDISSSMTNSTATSKPPVTLRIVVPASQCGSLIGKGGCKIK 121
Query: 158 EMRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKRPG 217
E+R +TGA ++V D P + + + + G S+ + + I + E+
Sbjct: 122 EIRESTGAQVQV-AGDMLP---NSTERAITIAGTPQSIIECVKQICVVMLES-------- 169
Query: 218 PNNGHSYLPPFPEMPPPPFRPRHNPASPGSYPSPVGPFHSMDRGMGPSQPFDHQAAFSHG 277
P G + P+RP+ + SP + G +++ QP A+ S
Sbjct: 170 PPKGVTI----------PYRPKPS-GSPVIFAG--GQAYAVQGQHAIPQPDSSSASISPQ 216
Query: 278 MDPMVPPNSDRIPFPYGSERPGHGPTFDRPPSPRSWTPQGVGGGDPRGFDASSGFTPRNR 337
+ + + PFP G PG QG G DAS+
Sbjct: 217 LTKLHQLAMQQSPFPMGPNNPGF---------------QG-------GMDASA------- 247
Query: 338 PVESGNHAAILTSTTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATEGV 397
++ +H E+ IP + + G S ++ IRQ+SGA + + +P G+ +
Sbjct: 248 --QTSSH---------EMTIPNDLIGCIIGRQGSKINEIRQMSGAQIKIANPVEGSADRQ 296
Query: 398 VMVSGTSDQMRAAQSLIHA 416
V ++G++ + A+ LI+A
Sbjct: 297 VTITGSAASISLAEYLINA 315
>gi|426218401|ref|XP_004003435.1| PREDICTED: poly(rC)-binding protein 3 isoform 4 [Ovis aries]
Length = 332
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 98/381 (25%), Positives = 155/381 (40%), Gaps = 74/381 (19%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMRH 109
+ +LL H +VGS+IGK G V+ + E+GA I I++ + ERIV I+ ++ +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE--GNCPERIVTITGPTDAIFK- 70
Query: 110 SPAQDAVMRVHSRIAEIGFEPGQA---VVARLLVHSQQIGCLLGRGGHIVSEMRRATGAS 166
+ A A I + P + V RL+V + Q G L+G+GG + E+R +TGA
Sbjct: 71 AFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQ 130
Query: 167 IRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKRPGPNNGHS-YL 225
++V D P + + V + G ++ + I + E+ P G + +
Sbjct: 131 VQV-AGDMLP---NSTERAVTISGTPDAIIQCVKQICVVMLES--------PRKGVTVVV 178
Query: 226 PPFPEMPPPPFRPRHNPASPGSYPSPVGPFHSMDRGMGPSQPFDHQAAFSHGMDPMVPPN 285
P P P F G Y P H P HQ A
Sbjct: 179 APKPASTPVIFAGGQAYTIQGQYAIP----H-------PDLTKLHQLAM----------- 216
Query: 286 SDRIPF-PYGSERPGHGPTFDRP-PSPRS-WTPQGVGGGDPRGFDASSGFTPRNRPVESG 342
+ PF P G P P DR P RS W DAS
Sbjct: 217 -QQTPFPPLGQTNPAF-PGTDRAVPFVRSPWA----------CLDASP------------ 252
Query: 343 NHAAILTSTTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATEGVVMVSG 402
++T E+ IP + + G + ++ IRQ+SGA + + + G++E + ++G
Sbjct: 253 ------PASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQITITG 306
Query: 403 TSDQMRAAQSLIHAFILCGVT 423
T + AQ LI+A + VT
Sbjct: 307 TPANISLAQYLINARLTSEVT 327
>gi|61557337|ref|NP_001013241.1| poly(rC)-binding protein 2 [Rattus norvegicus]
gi|193083108|ref|NP_001122383.1| poly(rC)-binding protein 2 isoform d [Homo sapiens]
gi|6707736|sp|Q15366.1|PCBP2_HUMAN RecName: Full=Poly(rC)-binding protein 2; AltName: Full=Alpha-CP2;
AltName: Full=Heterogeneous nuclear ribonucleoprotein
E2; Short=hnRNP E2
gi|460773|emb|CAA55015.1| hnRNP-E2 [Homo sapiens]
gi|50926841|gb|AAH78906.1| Poly(rC) binding protein 2 [Rattus norvegicus]
gi|119617116|gb|EAW96710.1| poly(rC) binding protein 2, isoform CRA_e [Homo sapiens]
Length = 365
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 95/399 (23%), Positives = 167/399 (41%), Gaps = 93/399 (23%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMRH 109
+ +LL H +VGS+IGK G V+ + E+GA I I++ + ERI+ ++ N+ +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISE--GNCPERIITLAGPTNAIFKA 71
Query: 110 SPAQDAVMRVHSRIAEIGFEPGQA----VVARLLVHSQQIGCLLGRGGHIVSEMRRATGA 165
+ ++ I+ A V RL+V + Q G L+G+GG + E+R +TGA
Sbjct: 72 FAM--IIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGA 129
Query: 166 SIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKRPGPNNGHSYL 225
++V D P + + + + G S+ + + I + ET+ S
Sbjct: 130 QVQV-AGDMLP---NSTERAITIAGIPQSIIECVKQICVVMLETL------------SQS 173
Query: 226 PPFPEMPPPPFRPRHNPASPGSYPSPVGPFHSMDRGMGPSQPFDHQAAFSHGMDPMVPPN 285
P P+ P+RP+ P+S SPV DR +S G
Sbjct: 174 P--PKGVTIPYRPK--PSS-----SPVIFAGGQDR-------------YSTG-------- 203
Query: 286 SDRIPFPYGSERPGHGPTFDRPPSPRSWTPQGV-------------------------GG 320
SD FP+ + P + PP ++T QG G
Sbjct: 204 SDSASFPHTTPSMCLNPDLEGPP-LEAYTIQGQYAIPQPDLTKLHQLAMQQSHFPMTHGN 262
Query: 321 GDPRGFDASS----GFTPRNRPVESGNHAAILTSTTIEVVIPQLYMAHVYGENNSNLSHI 376
G ++SS G+ + ++ +H E+ IP + + G + ++ I
Sbjct: 263 TGFSGIESSSPEVKGYWGLDASAQTTSH---------ELTIPNDLIGCIIGRQGAKINEI 313
Query: 377 RQISGANVVVNDPKPGATEGVVMVSGTSDQMRAAQSLIH 415
RQ+SGA + + +P G+T+ V ++G++ + AQ LI+
Sbjct: 314 RQMSGAQIKIANPVEGSTDRQVTITGSAASISLAQYLIN 352
>gi|410920039|ref|XP_003973491.1| PREDICTED: poly(rC)-binding protein 2-like [Takifugu rubripes]
Length = 327
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 84/369 (22%), Positives = 154/369 (41%), Gaps = 70/369 (18%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMR- 108
+ +LL H +VGS+IGK G V+ + E+GA I I++ + ERI+ ++ + +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISE--GNCPERIITLAGPTTAIFKA 71
Query: 109 HSPAQDAVMR-VHSRIAEIGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASI 167
S D + + S + V R++V + Q G L+G+GG + E+R +TGA +
Sbjct: 72 FSMIIDKLEEDISSSMTNSTATSKPPVTLRIVVPASQCGSLIGKGGCKIKEIRESTGAQV 131
Query: 168 RVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKRPGPNNGHSYLPP 227
+V D P + + + + G HS+ + + I + E+ P G +
Sbjct: 132 QV-AGDMLP---NSTERAITIAGTAHSIIECVKQICVVMLES--------PPKGVTI--- 176
Query: 228 FPEMPPPPFRPRHNPASPGSYPSPVGPFHSMDRGMGPSQPFDHQAAFSHGMDPMVPPNSD 287
P+RP+ + SP + G +++ QP AA S + +
Sbjct: 177 -------PYRPKPS-GSPVIFAG--GQAYAVQGQHAIPQPDSSSAAISPQLSKLHQLAMQ 226
Query: 288 RIPFPYGSERPGHGPTFDRPPSPRSWTPQGVGGGDPRGFDASSGFTPRNRPVESGNHAAI 347
+ PFP + + GFT + ++ +H
Sbjct: 227 QGPFPMAT--------------------------------CNQGFTGMDASAQACSH--- 251
Query: 348 LTSTTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATEGVVMVSGTSDQM 407
E+ IP + + G + +S IRQ+SGA + + +P G+T+ V ++G+ +
Sbjct: 252 ------EMTIPNDLIGCIIGRQGAKISEIRQMSGAQIKIANPVDGSTDRQVTITGSPASI 305
Query: 408 RAAQSLIHA 416
A+ LI A
Sbjct: 306 GLAEYLIKA 314
>gi|363735768|ref|XP_003641607.1| PREDICTED: poly(rC)-binding protein 3-like [Gallus gallus]
gi|449506326|ref|XP_002191682.2| PREDICTED: poly(rC)-binding protein 3 [Taeniopygia guttata]
Length = 339
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 100/389 (25%), Positives = 154/389 (39%), Gaps = 83/389 (21%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMRH 109
+ +LL H +VGS+IGK G V+ + E+GA I I++ + ERIV I+
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE--GNCPERIVTITG-------- 63
Query: 110 SPAQDAVMRVHSRIAEIGFEPGQA-------------VVARLLVHSQQIGCLLGRGGHIV 156
DA+ + + IA FE V RL+V + Q G L+G+GG +
Sbjct: 64 --PTDAIFKAFAMIA-YKFEEDITNSMSNSTATSKPPVTLRLVVPASQCGSLIGKGGSKI 120
Query: 157 SEMRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKRP 216
E+R +TGA ++V D P + + V + G ++ + I + E+
Sbjct: 121 KEIRESTGAQVQV-AGDMLP---NSTERAVTISGTPDAIIQCVKQICVVMLES------- 169
Query: 217 GPNNGHSY-LPPFPEMPPPPFRPRHNPASPGSYPSPVGPFHSMDRGMGPSQPFD-HQAAF 274
P G + P P P F G Y P H P Q HQ A
Sbjct: 170 -PPKGATIPYRPKPASTPVIFAGGQAYTIQGQYAIP----H-------PDQLTKLHQLAM 217
Query: 275 SHGMDPMVPPNSDRIPFPYGSERPGHGPTFDRPPSPRSWTPQGVGGGDPRGFDASSGFTP 334
P P FP G + P H S Q + G G DAS
Sbjct: 218 QQ--TPFTPLGQTTPAFP-GEKLPLHS----------SEEAQNL-MGQSSGLDASP---- 259
Query: 335 RNRPVESGNHAAILTSTTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGAT 394
++T E+ IP + + G + ++ IRQ+SGA + + + G++
Sbjct: 260 --------------PASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEGSS 305
Query: 395 EGVVMVSGTSDQMRAAQSLIHAFILCGVT 423
E + ++GT + AQ LI+A + VT
Sbjct: 306 ERQITITGTPANISLAQYLINARLTSEVT 334
>gi|158293685|ref|XP_557579.3| AGAP004942-PA [Anopheles gambiae str. PEST]
gi|157016566|gb|EAL40201.3| AGAP004942-PA [Anopheles gambiae str. PEST]
Length = 382
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 91/379 (24%), Positives = 161/379 (42%), Gaps = 54/379 (14%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMR- 108
+ +L+ +VGS+IGK G IV+ F+ E+GA I I+D ERIV +S ++ +
Sbjct: 22 LTIRLIMQGKEVGSIIGKKGEIVKRFREESGAKINISDC--SCPERIVTVSGSRSAIYKA 79
Query: 109 HSPAQDAVMRVHSRIAEIGFEPGQAVV-ARLLVHSQQIGCLLGRGGHIVSEMRRATGASI 167
+ S+ + G+ + RL+V + Q G L+G+GG + E+R TG SI
Sbjct: 80 FTLITKKFEEWCSQFQDNANTQGKPQIPIRLIVPASQCGSLIGKGGSKIKEIREITGCSI 139
Query: 168 RVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKRPGPNNGHSYLPP 227
+V + P + + V + G+ ++ ++HI + E+ P G +
Sbjct: 140 QV-ASEMLP---NSTERAVTLSGSAEAITQCIYHICCVMLES--------PPKGATI--- 184
Query: 228 FPEMPPPPFRPRHNPASPGSYPSPVGPFHSMDRGMG-PSQPFDHQAAFSHGMDPMVPPNS 286
P+RP+ P G G +++ P+Q A +P+ +
Sbjct: 185 -------PYRPK--PQVNGPVIVANGQAYTIQGNYAVPAQEVSGIAK-----NPLAGLAA 230
Query: 287 DRIPFPYGSERPGHGPTFD-RPPSPRSWTPQGVGGGDPRGFDASSGFTPRNR---PVESG 342
+ S G PT P+ + P S T NR PV+S
Sbjct: 231 LGLAGAIPSNTGGLNPTGKYSSPNALEYIPHAALA----ALAGSQLRTNNNRNVAPVQSQ 286
Query: 343 NHAAILTSTTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPK---PGATEGVVM 399
+H E+ +P + + G+ + ++ IRQISGA + +++ + G T+ +
Sbjct: 287 SH---------EMTVPNDLIGCIIGKGGTKIAEIRQISGAMIRISNCEERDSGNTDRTIT 337
Query: 400 VSGTSDQMRAAQSLIHAFI 418
++G D + AQ LI+ I
Sbjct: 338 ITGNPDSVALAQYLINMRI 356
Score = 43.9 bits (102), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 36/53 (67%), Gaps = 1/53 (1%)
Query: 49 EVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIA-DILPDSEERIVVIS 100
++ +L+ + GSLIGKGGS ++ + TG SI++A ++LP+S ER V +S
Sbjct: 105 QIPIRLIVPASQCGSLIGKGGSKIKEIREITGCSIQVASEMLPNSTERAVTLS 157
Score = 42.7 bits (99), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 49/98 (50%), Gaps = 6/98 (6%)
Query: 130 PGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAPRCGSPHDEIVQVI 189
P Q+ + V + IGC++G+GG ++E+R+ +GA IR+ ++ R D + +
Sbjct: 282 PVQSQSHEMTVPNDLIGCIIGKGGTKIAEIRQISGAMIRISNCEE--RDSGNTDRTITIT 339
Query: 190 GNYHSVQDALFHITSRLRETIFPMKRPGPNNGHSYLPP 227
GN SV A + I R+ M P G+ Y+ P
Sbjct: 340 GNPDSVALAQYLINMRISMETAGMPIP----GYHYITP 373
Score = 42.4 bits (98), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 47/98 (47%), Gaps = 12/98 (12%)
Query: 113 QDAVMRVHSRIAEIGF--EPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVF 170
+DA M +I +I +P + RL++ +++G ++G+ G IV R +GA I +
Sbjct: 2 EDAKM---VKIGDINLSDDPAVTLTIRLIMQGKEVGSIIGKKGEIVKRFREESGAKINI- 57
Query: 171 PKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRE 208
C P + IV V G+ ++ A IT + E
Sbjct: 58 -----SDCSCP-ERIVTVSGSRSAIYKAFTLITKKFEE 89
>gi|301604860|ref|XP_002932078.1| PREDICTED: poly(rC)-binding protein 3-like [Xenopus (Silurana)
tropicalis]
Length = 339
Score = 74.3 bits (181), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 100/389 (25%), Positives = 154/389 (39%), Gaps = 83/389 (21%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMRH 109
+ +LL H +VGS+IGK G V+ + E+GA I I++ + ERIV I+
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE--GNCPERIVTITG-------- 63
Query: 110 SPAQDAVMRVHSRIAEIGFEPGQA-------------VVARLLVHSQQIGCLLGRGGHIV 156
DA+ + + IA FE V RL+V + Q G L+G+GG +
Sbjct: 64 --PTDAIFKAFAMIA-YKFEEDIINSMSNSTATSKPPVTLRLVVPASQCGSLIGKGGSKI 120
Query: 157 SEMRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKRP 216
E+R +TGA ++V D P + + V + G ++ + I + E+
Sbjct: 121 KEIRESTGAQVQV-AGDMLP---NSTERAVTISGTPDAIIQCVKQICVVMLES------- 169
Query: 217 GPNNGHSY-LPPFPEMPPPPFRPRHNPASPGSYPSPVGPFHSMDRGMGPSQPFD-HQAAF 274
P G + P P P F + G Y P H P Q HQ A
Sbjct: 170 -PPKGATIPYRPKPASAPVIFAGGQAYSIQGQYAIP----H-------PDQLTKLHQLAM 217
Query: 275 SHGMDPMVPPNSDRIPFPYGSERPGHGPTFDRPPSPRSWTPQGVGGGDPRGFDASSGFTP 334
P P FP G + P H S Q + G G DASS
Sbjct: 218 QQ--TPFTPLGQTTPAFP-GEKLPLHS----------SEEAQNL-MGQSAGMDASS---- 259
Query: 335 RNRPVESGNHAAILTSTTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGAT 394
++T E+ IP + + G + ++ IRQ+SGA + + G+
Sbjct: 260 --------------QASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIASAMEGSA 305
Query: 395 EGVVMVSGTSDQMRAAQSLIHAFILCGVT 423
E + ++G+ + AQ LI+A + VT
Sbjct: 306 ERQITITGSPANISLAQYLINARLTSEVT 334
>gi|348528027|ref|XP_003451520.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K-like
[Oreochromis niloticus]
Length = 429
Score = 74.3 bits (181), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 98/409 (23%), Positives = 165/409 (40%), Gaps = 71/409 (17%)
Query: 47 EEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSE--ERIVVISAREN 104
+E V ++L G++IGKGG ++ + + AS+ + PDS ERI+ ++A +
Sbjct: 41 DEMVELRVLLQSKNAGAVIGKGGKNIKALRTDYNASVSV----PDSSGPERILSVNASID 96
Query: 105 SEMRHSPAQDAVMRVHSRIAEIGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATG 164
+ + + + I F+ RLL+H G ++G G + E+R T
Sbjct: 97 TIGEILLKIIPTLEEYQHYSGIDFD----CELRLLIHQSLAGGIIGVKGAKIKELRENTQ 152
Query: 165 ASIRVFPK------DQAPRCGSPHDEIVQVI---------------------GNYHSVQD 197
+I++F + D+ G + +V+ I Y D
Sbjct: 153 TTIKLFQECCPHSTDRVVLVGGKPERVVECIKVILELVSEAPIKGRAQPYDPNFYDETYD 212
Query: 198 -----ALFHITSRLRETIFPMKRPGPNNGHSYLPPFP-EMPPPPFRPRHNPASPGSYPSP 251
LF R FP++ G G +PP P PP R ++ SP P P
Sbjct: 213 YGGFTMLFEERGRRPIGGFPIRVRG---GFERMPPVRGSRPMPPSRRDYDDMSPRRGPPP 269
Query: 252 VGPFHSMDRGMGPSQPFDHQAAFSHGMDPMVPPNSDRIPFPYGSERPGHGPTFDRPPSPR 311
+ RG G S+ + DR F +GS HG DRP R
Sbjct: 270 -----PLSRGRGGSRARNLPLPPPP----PPRGGGDR--FSHGSY---HGSMDDRPSDRR 315
Query: 312 SWTPQ--GVGGGDPRGFDASSG---FTPRNRPVESGNHAAILTSTTIEVVIPQLYMAHVY 366
+ + GG G+D SS F R S ++T+ +V IP+ +
Sbjct: 316 GRGDRYDSMSGG---GYDNSSSWDHFQSGGRGSYSDIGGPVITT---QVTIPKDLAGSII 369
Query: 367 GENNSNLSHIRQISGANVVVNDPKPGATEGVVMVSGTSDQMRAAQSLIH 415
G+ + IR SGA++ +++P G+ + ++ ++GT DQ++ AQ L+
Sbjct: 370 GKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQDQIQNAQYLLQ 418
>gi|432873594|ref|XP_004072294.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K-like [Oryzias
latipes]
Length = 433
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 99/406 (24%), Positives = 167/406 (41%), Gaps = 60/406 (14%)
Query: 47 EEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSE--ERIVVISAREN 104
+E V ++L G++IGKGG ++ +++ AS+ + PDS ERI+ ISA
Sbjct: 40 DEMVELRILLQSKNAGAVIGKGGKNIKALRSDYNASVSV----PDSSGPERILSISADIE 95
Query: 105 SEMRHSPAQDAVMRVHSRIAEIGFEPGQAVVA--RLLVHSQQIGCLLGRGGHIVSEMRRA 162
+ + ++++ + E G RLL+H G ++G G + E+R
Sbjct: 96 T------VGEILLKIIPTLEEYQQYNGMDFDCELRLLIHQSLAGSIIGVKGAKIKELREN 149
Query: 163 TGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMK-RPGPNNG 221
T SI++F + C D +V V G V + + + + E P+K R P +
Sbjct: 150 TKTSIKLFQE----CCPQSTDRVVLVGGKSERVVECVKTMLELISEA--PIKGRTQPYDP 203
Query: 222 HSYLPPFPEMPPPPFRPRHNPASP-GSYPSPVGPFHSMDRGMGPSQPFDHQAAFSHGMDP 280
+ Y + F R GS+P G S DRG +D + G P
Sbjct: 204 NFYDETYEYGGFTMFEERGGGRRLMGSFPMR-GSRSSGDRG------YDRMPSSRVGRGP 256
Query: 281 MVPPNSDRIPFPYGSERPGHGPTFDRPPSPRSWT-PQG--VGGGDPRGFDASSGFTP--- 334
+ P D P + PS RS P G GGD R +D+ G
Sbjct: 257 LPPSRRDYDDISPRRGPPPPHHSRVVRPSGRSRNMPMGHPHRGGDDRYYDSYRGSDERSN 316
Query: 335 --RNRPVESG-------NHAAILTS----------------TTIEVVIPQLYMAHVYGEN 369
R+RP G ++++ S T +V IP+ + G+
Sbjct: 317 DRRSRPDRYGDNMSGGYDNSSSWDSYQSGGRGSYSDMGGPVITTQVTIPKDLAGSIIGKG 376
Query: 370 NSNLSHIRQISGANVVVNDPKPGATEGVVMVSGTSDQMRAAQSLIH 415
+ IR SGA++ +++P G+ + ++ ++GT DQ++ AQ L+
Sbjct: 377 GQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQDQIQNAQYLLQ 422
>gi|380024759|ref|XP_003696159.1| PREDICTED: poly(rC)-binding protein 3-like [Apis florea]
Length = 560
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 83/165 (50%), Gaps = 12/165 (7%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMRH 109
+ +L+ +VGS+IGK G IV+ F+ E+GA I I+D ERIV ++ NS +
Sbjct: 18 LTIRLIMQGKEVGSIIGKKGEIVKRFREESGAKINISD--GSCPERIVTVTGPTNSIFKA 75
Query: 110 -----SPAQDAVMRVHSRIAEIGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATG 164
++ + H I G P + RL+V + Q G L+G+GG + E+R TG
Sbjct: 76 FTLICKKFEEWCSQFHD-IQGSGGVPRPPITLRLIVPASQCGSLIGKGGSKIKEIREVTG 134
Query: 165 ASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRET 209
ASI+V D P + + V + G ++ ++HI + E+
Sbjct: 135 ASIQV-ASDMLP---NSTERAVTISGTSEAITQCIYHICCVMLES 175
Score = 42.4 bits (98), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 40/67 (59%), Gaps = 2/67 (2%)
Query: 137 RLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQ 196
+ V ++ IGC++G+GG ++E+R+ +GA IR+ ++ R G D + + GN +V
Sbjct: 369 EMTVPNELIGCIIGKGGTKIAEIRQISGAMIRISNCEE--REGGATDRTITITGNPDAVS 426
Query: 197 DALFHIT 203
A + I+
Sbjct: 427 LAQYLIS 433
Score = 41.2 bits (95), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 51/104 (49%), Gaps = 5/104 (4%)
Query: 314 TPQGVGGGDPRGFDASSGFTPRNRPVESGNHAAILTSTTIEVVIPQLYMAHVYGENNSNL 373
TP GG +P A +G R AA + T E+ +P + + G+ + +
Sbjct: 331 TPANTGGLNPAALAALAGSQLRTSNTNRQQPAA--NNQTHEMTVPNELIGCIIGKGGTKI 388
Query: 374 SHIRQISGANVVVNDPKP---GATEGVVMVSGTSDQMRAAQSLI 414
+ IRQISGA + +++ + GAT+ + ++G D + AQ LI
Sbjct: 389 AEIRQISGAMIRISNCEEREGGATDRTITITGNPDAVSLAQYLI 432
Score = 40.0 bits (92), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 40/70 (57%), Gaps = 5/70 (7%)
Query: 352 TIEVVIPQLYMAHVYGENNSNLSHIRQISGANV-VVNDPKPGATEGVVMVSGTSDQMRAA 410
T+ +++P + G+ S + IR+++GA++ V +D P +TE V +SGTS+ +
Sbjct: 105 TLRLIVPASQCGSLIGKGGSKIKEIREVTGASIQVASDMLPNSTERAVTISGTSEAI--T 162
Query: 411 QSLIHAFILC 420
Q + H I C
Sbjct: 163 QCIYH--ICC 170
Score = 39.7 bits (91), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 38/80 (47%), Gaps = 7/80 (8%)
Query: 129 EPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAPRCGSPHDEIVQV 188
+P + RL++ +++G ++G+ G IV R +GA I + GS + IV V
Sbjct: 13 DPSVTLTIRLIMQGKEVGSIIGKKGEIVKRFREESGAKINISD-------GSCPERIVTV 65
Query: 189 IGNYHSVQDALFHITSRLRE 208
G +S+ A I + E
Sbjct: 66 TGPTNSIFKAFTLICKKFEE 85
>gi|354490191|ref|XP_003507243.1| PREDICTED: poly(rC)-binding protein 2 isoform 1 [Cricetulus
griseus]
gi|344239259|gb|EGV95362.1| Poly(rC)-binding protein 2 [Cricetulus griseus]
Length = 362
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 95/393 (24%), Positives = 166/393 (42%), Gaps = 84/393 (21%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMRH 109
+ +LL H +VGS+IGK G V+ + E+GA I I++ + ERI+ ++ N+ +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISE--GNCPERIITLAGPTNAIFKA 71
Query: 110 SPAQDAVMRVHSRIAEIGFEPGQA----VVARLLVHSQQIGCLLGRGGHIVSEMRRATGA 165
+ ++ I+ A V RL+V + Q G L+G+GG + E+R +TGA
Sbjct: 72 FAM--IIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGA 129
Query: 166 SIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKRPGPNNGHSYL 225
++V D P + + + + G S+ + + I + E+ P G +
Sbjct: 130 QVQV-AGDMLP---NSTERAITIAGIPQSIIECVKQICVVMLES--------PPKGVTI- 176
Query: 226 PPFPEMPPPPFRPRHNPASPGSYPSPVGPFHSMDRGMGPSQPFDHQAAFSHGMDPMVPPN 285
P+RP+ P+S SPV DR +S G
Sbjct: 177 ---------PYRPK--PSS-----SPVIFAGGQDR-------------YSTG-------- 199
Query: 286 SDRIPFPYGSERPGHGPTFDRPPSPRSWTPQG-----------------------VGGGD 322
SD FP+ + P + PP ++T QG + G+
Sbjct: 200 SDSASFPHTTPSMCLNPDLEGPP-LEAYTIQGQYAIPQPDLTKLHQLAMQQSHFPMTHGN 258
Query: 323 PRGFDASSGFTPRNRPVESGNHAAILTSTTIEVVIPQLYMAHVYGENNSNLSHIRQISGA 382
GF +P + +G A+ T T+ E+ IP + + G + ++ IRQ+SGA
Sbjct: 259 -TGFSGIESSSPEVKGYWAGLDASAQT-TSHELTIPNDLIGCIIGRQGAKINEIRQMSGA 316
Query: 383 NVVVNDPKPGATEGVVMVSGTSDQMRAAQSLIH 415
+ +P G+T+ V ++G++ + AQ LI+
Sbjct: 317 QIKTANPVEGSTDRQVTITGSAASISLAQYLIN 349
>gi|327260862|ref|XP_003215252.1| PREDICTED: poly(rC)-binding protein 3-like [Anolis carolinensis]
Length = 339
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 100/389 (25%), Positives = 154/389 (39%), Gaps = 83/389 (21%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMRH 109
+ +LL H +VGS+IGK G V+ + E+GA I I++ + ERIV I+
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE--GNCPERIVTITG-------- 63
Query: 110 SPAQDAVMRVHSRIAEIGFEPGQA-------------VVARLLVHSQQIGCLLGRGGHIV 156
DA+ + + IA FE V RL+V + Q G L+G+GG +
Sbjct: 64 --PTDAIFKAFAMIA-YKFEEDIINSMSNSTATSKPPVTLRLVVPASQCGSLIGKGGSKI 120
Query: 157 SEMRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKRP 216
E+R +TGA ++V D P + + V + G ++ + I + E+
Sbjct: 121 KEIRESTGAQVQV-AGDMLP---NSTERAVTISGTPDAIIQCVKQICVVMLES------- 169
Query: 217 GPNNGHSY-LPPFPEMPPPPFRPRHNPASPGSYPSPVGPFHSMDRGMGPSQPFD-HQAAF 274
P G + P P P F G Y P H P Q HQ A
Sbjct: 170 -PPKGATIPYRPKPASTPVIFAGGQAYTIQGQYAIP----H-------PDQLTKLHQLAM 217
Query: 275 SHGMDPMVPPNSDRIPFPYGSERPGHGPTFDRPPSPRSWTPQGVGGGDPRGFDASSGFTP 334
P P FP G + P H S Q + G G DAS
Sbjct: 218 QQ--TPFTPLGQTTPAFP-GEKLPLHS----------SEEAQNL-MGQSSGLDASP---- 259
Query: 335 RNRPVESGNHAAILTSTTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGAT 394
++T E+ IP + + G + ++ IRQ+SGA + + + G++
Sbjct: 260 --------------PASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEGSS 305
Query: 395 EGVVMVSGTSDQMRAAQSLIHAFILCGVT 423
E + ++GT + AQ LI+A + VT
Sbjct: 306 ERQITITGTPANISLAQYLINARLTSEVT 334
>gi|77736367|ref|NP_001029883.1| poly(rC)-binding protein 2 [Bos taurus]
gi|157057549|ref|NP_035172.2| poly(rC)-binding protein 2 isoform 2 [Mus musculus]
gi|291389257|ref|XP_002711065.1| PREDICTED: poly(rC) binding protein 2-like isoform 2 [Oryctolagus
cuniculus]
gi|348581077|ref|XP_003476304.1| PREDICTED: poly(rC)-binding protein 2 isoform 2 [Cavia porcellus]
gi|426224370|ref|XP_004006344.1| PREDICTED: poly(rC)-binding protein 2 isoform 2 [Ovis aries]
gi|74268197|gb|AAI03398.1| Poly(rC) binding protein 2 [Bos taurus]
gi|119617114|gb|EAW96708.1| poly(rC) binding protein 2, isoform CRA_c [Homo sapiens]
gi|148672028|gb|EDL03975.1| poly(rC) binding protein 2, isoform CRA_b [Mus musculus]
gi|149031923|gb|EDL86835.1| rCG50739, isoform CRA_d [Rattus norvegicus]
gi|296487920|tpg|DAA30033.1| TPA: poly(rC) binding protein 2 [Bos taurus]
Length = 349
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 92/378 (24%), Positives = 161/378 (42%), Gaps = 67/378 (17%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMRH 109
+ +LL H +VGS+IGK G V+ + E+GA I I++ + ERI+ ++ N+ +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISE--GNCPERIITLAGPTNAIFKA 71
Query: 110 SPAQDAVMRVHSRIAEIGFEPGQA----VVARLLVHSQQIGCLLGRGGHIVSEMRRATGA 165
+ ++ I+ A V RL+V + Q G L+G+GG + E+R +TGA
Sbjct: 72 FAM--IIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGA 129
Query: 166 SIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKRPGPNNGHSYL 225
++V D P + + + + G S+ + + I + E+ P G +
Sbjct: 130 QVQV-AGDMLP---NSTERAITIAGIPQSIIECVKQICVVMLES--------PPKGVTI- 176
Query: 226 PPFPEMPPPPFRPRHNPASPGSYPSPVGPFHSMDRGMGPSQPFDHQAAFSHGMDPMVPPN 285
P+RP+ P+S SPV DR +S G
Sbjct: 177 ---------PYRPK--PSS-----SPVIFAGGQDR-------------YSTG-------- 199
Query: 286 SDRIPFPYGSERPGHGPTFDRPPSPRSWTPQGVGGGDPRGFDASSGFTPRNR--PVESGN 343
SD FP+ + P + PP ++T QG + P+ GN
Sbjct: 200 SDSASFPHTTPSMCLNPDLEGPP-LEAYTIQGQYAIPQPDLTKLHQLAMQQSHFPMTHGN 258
Query: 344 HA------AILTSTTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATEGV 397
A +T+ E+ IP + + G + ++ IRQ+SGA + + +P G+T+
Sbjct: 259 TGFSAGLDASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQ 318
Query: 398 VMVSGTSDQMRAAQSLIH 415
V ++G++ + AQ LI+
Sbjct: 319 VTITGSAASISLAQYLIN 336
>gi|413935391|gb|AFW69942.1| hypothetical protein ZEAMMB73_108333 [Zea mays]
Length = 468
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 90/172 (52%), Gaps = 13/172 (7%)
Query: 51 VFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSE---ERIVVISARENSEM 107
VF+L+ DKVG +IG+ G ++ +ET A +++ D P + RIV++SARE E
Sbjct: 99 VFRLVVPADKVGGIIGRRGDTIKRLCDETRARVRVLDA-PHGDGAFSRIVLVSAREEVEA 157
Query: 108 RHSPAQDAVMRVHSRIAEIG--------FEPGQAVVA-RLLVHSQQIGCLLGRGGHIVSE 158
SPA +A +++ I EI P + + RLLV Q ++G+ G +
Sbjct: 158 ELSPAMNAAIKIFKHINEIEDINSDGTLMAPAPEISSVRLLVPFAQALHVIGKQGVTIKS 217
Query: 159 MRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETI 210
++ +TG+++R+ +D+ + + IV++ G V +AL + LR+ +
Sbjct: 218 IQESTGSTVRIMDEDELLSHETMGERIVEINGASLEVLNALKLVLGLLRKFL 269
>gi|212723546|ref|NP_001131366.1| uncharacterized protein LOC100192689 [Zea mays]
gi|194691330|gb|ACF79749.1| unknown [Zea mays]
gi|413935393|gb|AFW69944.1| hypothetical protein ZEAMMB73_108333 [Zea mays]
Length = 467
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 90/172 (52%), Gaps = 13/172 (7%)
Query: 51 VFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSE---ERIVVISARENSEM 107
VF+L+ DKVG +IG+ G ++ +ET A +++ D P + RIV++SARE E
Sbjct: 99 VFRLVVPADKVGGIIGRRGDTIKRLCDETRARVRVLDA-PHGDGAFSRIVLVSAREEVEA 157
Query: 108 RHSPAQDAVMRVHSRIAEIG--------FEPGQAVVA-RLLVHSQQIGCLLGRGGHIVSE 158
SPA +A +++ I EI P + + RLLV Q ++G+ G +
Sbjct: 158 ELSPAMNAAIKIFKHINEIEDINSDGTLMAPAPEISSVRLLVPFAQALHVIGKQGVTIKS 217
Query: 159 MRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETI 210
++ +TG+++R+ +D+ + + IV++ G V +AL + LR+ +
Sbjct: 218 IQESTGSTVRIMDEDELLSHETMGERIVEINGASLEVLNALKLVLGLLRKFL 269
>gi|432865686|ref|XP_004070563.1| PREDICTED: poly(rC)-binding protein 4-like [Oryzias latipes]
Length = 467
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 92/387 (23%), Positives = 159/387 (41%), Gaps = 77/387 (19%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMRH 109
+ +LL H +VGS+IGK G V+ + E+ A + I++ ERI+ I+
Sbjct: 27 LTLRLLMHGKEVGSIIGKKGETVKRIREESSARVNISE--GSCPERIITITG-------- 76
Query: 110 SPAQDAVMRVHSRIAEIGFEPGQAVVA------------RLLVHSQQIGCLLGRGGHIVS 157
+ D+V R + I E A+VA RL++ + Q G L+G+GG +
Sbjct: 77 --STDSVFRAFTMITYKLEEDLTALVANGTISSKPPVTLRLVIPASQCGSLIGKGGAKIK 134
Query: 158 EMRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKRPG 217
E+R +TGA I+V D P + + V + GN SV + I + + E+
Sbjct: 135 EIRESTGAQIQV-AGDLLP---NSTERGVTISGNQDSVIQCVKLICTVILES-------- 182
Query: 218 PNNGHSYLPPFPEMPPPPFRPRHNPASPGSYPSPVGPFHSMDRGMGPSQPFDHQAAFSHG 277
P G + +P P P N S +P P +S+ +G D Q A++
Sbjct: 183 PPKGAT-IPYRPTPSPAALLIAGNQVFEASDFAP-HPLYSVTQG-----GLDLQQAYAL- 234
Query: 278 MDPMVPPNSDRIPFPYGSERPGHGPTFDRPPSPRSWTPQGVGGGD------PRGFDASSG 331
++ P+ H + + SP + + G P G D++S
Sbjct: 235 --------QNQYGIPHSELAKLHQLSVQQGLSPIAQPASTIMPGKLLLHFLPSGMDSTS- 285
Query: 332 FTPRNRPVESGNHAAILTSTTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKP 391
T+ E++IP + + G + ++ IRQ+SGA + +
Sbjct: 286 ------------------QTSQELLIPNDLIGSIIGRQGTKINEIRQVSGAQIKIGSQLD 327
Query: 392 GATEGVVMVSGTSDQMRAAQSLIHAFI 418
G ++ V ++GT + AQ LI + +
Sbjct: 328 GTSDRHVTITGTPVSINLAQYLITSCL 354
Score = 40.4 bits (93), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 42/87 (48%), Gaps = 7/87 (8%)
Query: 131 GQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAPRCGSPHDEIVQVIG 190
G + RLL+H +++G ++G+ G V +R + A + + GS + I+ + G
Sbjct: 24 GVTLTLRLLMHGKEVGSIIGKKGETVKRIREESSARVNISE-------GSCPERIITITG 76
Query: 191 NYHSVQDALFHITSRLRETIFPMKRPG 217
+ SV A IT +L E + + G
Sbjct: 77 STDSVFRAFTMITYKLEEDLTALVANG 103
>gi|126345445|ref|XP_001362564.1| PREDICTED: poly(rC)-binding protein 2-like isoform 2 [Monodelphis
domestica]
Length = 338
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 92/378 (24%), Positives = 161/378 (42%), Gaps = 67/378 (17%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMRH 109
+ +LL H +VGS+IGK G V+ + E+GA I I++ + ERI+ ++ N+ +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISE--GNCPERIITLAGPTNAIFKA 71
Query: 110 SPAQDAVMRVHSRIAEIGFEPGQA----VVARLLVHSQQIGCLLGRGGHIVSEMRRATGA 165
+ ++ I+ A V RL+V + Q G L+G+GG + E+R +TGA
Sbjct: 72 FAM--IIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGA 129
Query: 166 SIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKRPGPNNGHSYL 225
++V D P + + + + G S+ + + I + E+ P G +
Sbjct: 130 QVQV-AGDMLP---NSTERAITIAGIPQSIIECVKQICVVMLES--------PPKGVTI- 176
Query: 226 PPFPEMPPPPFRPRHNPASPGSYPSPVGPFHSMDRGMGPSQPFDHQAAFSHGMDPMVPPN 285
P+RP+ P+S SPV DR +S G
Sbjct: 177 ---------PYRPK--PSS-----SPVIFAGGQDR-------------YSTG-------- 199
Query: 286 SDRIPFPYGSERPGHGPTFDRPPSPRSWTPQGVGGGDPRGFDASSGFTPRNR--PVESGN 343
SD FP+ + P + PP ++T QG + P+ GN
Sbjct: 200 SDSASFPHTTPSMCLNPDLEGPPL-EAYTIQGQYAIPQPDLTKLHQLAMQQSHFPMTHGN 258
Query: 344 HA------AILTSTTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATEGV 397
A +T+ E+ IP + + G + ++ IRQ+SGA + + +P G+T+
Sbjct: 259 TGFSAGLDASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQ 318
Query: 398 VMVSGTSDQMRAAQSLIH 415
V ++G++ + AQ LI+
Sbjct: 319 VTITGSAASISLAQYLIN 336
>gi|148833484|ref|NP_001092090.1| poly(rC)-binding protein 2 isoform c [Homo sapiens]
gi|157042772|ref|NP_001096636.1| poly(rC)-binding protein 2 isoform 3 [Mus musculus]
gi|73996241|ref|XP_857995.1| PREDICTED: poly(rC)-binding protein 2 isoform 20 [Canis lupus
familiaris]
gi|149714839|ref|XP_001504575.1| PREDICTED: poly(rC)-binding protein 2 isoform 2 [Equus caballus]
gi|291389259|ref|XP_002711066.1| PREDICTED: poly(rC) binding protein 2-like isoform 3 [Oryctolagus
cuniculus]
gi|332206041|ref|XP_003252098.1| PREDICTED: poly(rC)-binding protein 2 isoform 2 [Nomascus
leucogenys]
gi|348581075|ref|XP_003476303.1| PREDICTED: poly(rC)-binding protein 2 isoform 1 [Cavia porcellus]
gi|410964551|ref|XP_003988817.1| PREDICTED: poly(rC)-binding protein 2 isoform 1 [Felis catus]
gi|426224372|ref|XP_004006345.1| PREDICTED: poly(rC)-binding protein 2 isoform 3 [Ovis aries]
gi|426372755|ref|XP_004053283.1| PREDICTED: poly(rC)-binding protein 2 isoform 2 [Gorilla gorilla
gorilla]
gi|51491472|dbj|BAD36897.1| poly(rC) binding protein 2 [Homo sapiens]
gi|119617112|gb|EAW96706.1| poly(rC) binding protein 2, isoform CRA_a [Homo sapiens]
gi|148672027|gb|EDL03974.1| poly(rC) binding protein 2, isoform CRA_a [Mus musculus]
gi|149031921|gb|EDL86833.1| rCG50739, isoform CRA_b [Rattus norvegicus]
Length = 331
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 88/371 (23%), Positives = 149/371 (40%), Gaps = 71/371 (19%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMRH 109
+ +LL H +VGS+IGK G V+ + E+GA I I++ + ERI+ ++ N+ +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISE--GNCPERIITLAGPTNAIFKA 71
Query: 110 SPAQDAVMRVHSRIAEIGFEPGQA----VVARLLVHSQQIGCLLGRGGHIVSEMRRATGA 165
+ ++ I+ A V RL+V + Q G L+G+GG + E+R +TGA
Sbjct: 72 FAM--IIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGA 129
Query: 166 SIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKRPGPNNGHSY- 224
++V D P + + + + G S+ + + I + E+ P G +
Sbjct: 130 QVQV-AGDMLP---NSTERAITIAGIPQSIIECVKQICVVMLES--------PPKGVTIP 177
Query: 225 LPPFPEMPPPPFRPRHNPASPGSYPSPVGPFHSMDRGMGPSQPFDHQAAFSHGMDPMVPP 284
P P P F G Y P P HQ A PM
Sbjct: 178 YRPKPSSSPVIFAGGQAYTIQGQYAIP-----------QPDLTKLHQLAMQQSHFPMT-- 224
Query: 285 NSDRIPFPYGSERPGHGPTFDRPPSPRSWTPQGVGGGDPRGFDASSGFTPRNRPVESGNH 344
HG T GF +P + +G
Sbjct: 225 ---------------HGNT---------------------GFSGIESSSPEVKGYWAGLD 248
Query: 345 AAILTSTTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATEGVVMVSGTS 404
A+ T T+ E+ IP + + G + ++ IRQ+SGA + + +P G+T+ V ++G++
Sbjct: 249 ASAQT-TSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTITGSA 307
Query: 405 DQMRAAQSLIH 415
+ AQ LI+
Sbjct: 308 ASISLAQYLIN 318
>gi|334350022|ref|XP_003342305.1| PREDICTED: poly(rC)-binding protein 2-like [Monodelphis domestica]
Length = 320
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 88/371 (23%), Positives = 149/371 (40%), Gaps = 71/371 (19%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMRH 109
+ +LL H +VGS+IGK G V+ + E+GA I I++ + ERI+ ++ N+ +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISE--GNCPERIITLAGPTNAIFKA 71
Query: 110 SPAQDAVMRVHSRIAEIGFEPGQA----VVARLLVHSQQIGCLLGRGGHIVSEMRRATGA 165
+ ++ I+ A V RL+V + Q G L+G+GG + E+R +TGA
Sbjct: 72 FAM--IIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGA 129
Query: 166 SIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKRPGPNNGHSY- 224
++V D P + + + + G S+ + + I + E+ P G +
Sbjct: 130 QVQV-AGDMLP---NSTERAITIAGIPQSIIECVKQICVVMLES--------PPKGVTIP 177
Query: 225 LPPFPEMPPPPFRPRHNPASPGSYPSPVGPFHSMDRGMGPSQPFDHQAAFSHGMDPMVPP 284
P P P F G Y P P HQ A PM
Sbjct: 178 YRPKPSSSPVIFAGGQAYTIQGQYAIP-----------QPDLTKLHQLAMQQSHFPMT-- 224
Query: 285 NSDRIPFPYGSERPGHGPTFDRPPSPRSWTPQGVGGGDPRGFDASSGFTPRNRPVESGNH 344
HG T GF +P + +G
Sbjct: 225 ---------------HGNT---------------------GFSGIESSSPEVKGYWAGLD 248
Query: 345 AAILTSTTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATEGVVMVSGTS 404
A+ T T+ E+ IP + + G + ++ IRQ+SGA + + +P G+T+ V ++G++
Sbjct: 249 ASAQT-TSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTITGSA 307
Query: 405 DQMRAAQSLIH 415
+ AQ LI+
Sbjct: 308 ASISLAQYLIN 318
>gi|195606546|gb|ACG25103.1| hypothetical protein [Zea mays]
Length = 100
Score = 73.2 bits (178), Expect = 2e-10, Method: Composition-based stats.
Identities = 41/96 (42%), Positives = 55/96 (57%), Gaps = 1/96 (1%)
Query: 327 DASSGFTPRNRPVESGNHAAILTSTTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVV 386
DA R PV N A T TT EV+IP Y+ V G N S + I ++SGA++ V
Sbjct: 3 DAVPATDFRKGPVAIENQVATPTGTT-EVIIPCNYIGFVCGNNGSEIEEIEKMSGASITV 61
Query: 387 NDPKPGATEGVVMVSGTSDQMRAAQSLIHAFILCGV 422
+DPK G V++ G ++ + AQSLIHAFI CG+
Sbjct: 62 HDPKAGDANSKVVICGDPEETKKAQSLIHAFIFCGL 97
>gi|327263854|ref|XP_003216732.1| PREDICTED: poly(rC)-binding protein 2-like isoform 2 [Anolis
carolinensis]
Length = 331
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 88/369 (23%), Positives = 149/369 (40%), Gaps = 67/369 (18%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMR- 108
+ +LL H +VGS+IGK G V+ + E+GA I I++ + ERI+ ++ N+ +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISE--GNCPERIITLAGPTNAIFKA 71
Query: 109 HSPAQDAVMR-VHSRIAEIGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASI 167
+ D + + S + V RL+V + Q G L+G+GG + E+R +TGA +
Sbjct: 72 FAMIIDKLEEDISSSMTNSTASSRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQV 131
Query: 168 RVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKRPGPNNGHSY-LP 226
+V D P + + + + G S+ + + I + E+ P G +
Sbjct: 132 QV-AGDMLP---NSTERAITIAGIPQSIIECVKQICVVMLES--------PPKGVTIPYR 179
Query: 227 PFPEMPPPPFRPRHNPASPGSYPSPVGPFHSMDRGMGPSQPFDHQAAFSHGMDPMVPPNS 286
P P P F G Y P P HQ A PM
Sbjct: 180 PKPSSSPVIFAGGQAYTIQGQYAIP-----------QPDLTKLHQLAMQQSHFPM----- 223
Query: 287 DRIPFPYGSERPGHGPTFDRPPSPRSWTPQGVGGGDPRGFDASSGFTPRNRPVESGNHAA 346
HG T GF +P + +G A+
Sbjct: 224 ------------SHGNT---------------------GFSGVESSSPDEKGYWAGLDAS 250
Query: 347 ILTSTTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATEGVVMVSGTSDQ 406
T T+ E+ IP + + G + ++ IRQ+SGA + + +P G+T+ V ++G++
Sbjct: 251 AQT-TSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTITGSAAS 309
Query: 407 MRAAQSLIH 415
+ AQ LI+
Sbjct: 310 ISLAQYLIN 318
>gi|387017714|gb|AFJ50975.1| Poly(rC)-binding protein 2-like [Crotalus adamanteus]
Length = 347
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 93/371 (25%), Positives = 160/371 (43%), Gaps = 55/371 (14%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMR- 108
+ +LL H +VGS+IGK G V+ + E+GA I I++ + ERI+ ++ N+ +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISE--GNCPERIITLAGPTNAIFKA 71
Query: 109 HSPAQDAVMR-VHSRIAEIGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASI 167
+ D + + S + V RL+V + Q G L+G+GG + E+R +TGA +
Sbjct: 72 FAMIIDKLEEDISSSMTNSTASSRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQV 131
Query: 168 RVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKRPGPNNGHSYLPP 227
+V D P + + + + G S+ + + I + E+ P G +
Sbjct: 132 QV-AGDMLP---NSTERAITIAGIPQSIIECVKQICVVMLES--------PPKGVTI--- 176
Query: 228 FPEMPPPPFRPRHNPASPGSYPSPVGPFHSMDRGMGPSQPFDHQA-AFSHGMDPMVPPNS 286
P+RP+ P+S SPV DR S + H A + D PP
Sbjct: 177 -------PYRPK--PSS-----SPVIFAGGQDRYSSGSASYPHTAPSMCLNSDLEGPPQE 222
Query: 287 D-RIPFPYGSERPGHGPTFDRPPSPRSWTPQGVGG-GDPRGFDASSGFTPRNRPVESGNH 344
I Y +P + +S P G G G DAS+
Sbjct: 223 AYTIQGQYAIPQPDL-TKLHQLAMQQSHFPMSHGNTGFSAGLDASA-------------- 267
Query: 345 AAILTSTTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATEGVVMVSGTS 404
+T+ E+ IP + + G + ++ IRQ+SGA + + +P G+T+ V ++G++
Sbjct: 268 ----QTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTITGSA 323
Query: 405 DQMRAAQSLIH 415
+ AQ LI+
Sbjct: 324 ASISLAQYLIN 334
>gi|291327528|ref|NP_001167544.1| poly(rC)-binding protein 2 isoform 4 [Mus musculus]
gi|348581081|ref|XP_003476306.1| PREDICTED: poly(rC)-binding protein 2 isoform 4 [Cavia porcellus]
gi|74149644|dbj|BAE36444.1| unnamed protein product [Mus musculus]
gi|194378584|dbj|BAG63457.1| unnamed protein product [Homo sapiens]
gi|417398924|gb|JAA46495.1| Putative polyc-binding alphacp-1 [Desmodus rotundus]
Length = 322
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 88/371 (23%), Positives = 147/371 (39%), Gaps = 80/371 (21%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMRH 109
+ +LL H +VGS+IGK G V+ + E+GA I I++ + ERI+ ++ N+ +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISE--GNCPERIITLAGPTNAIFKA 71
Query: 110 SPAQDAVMRVHSRIAEIGFEPGQA----VVARLLVHSQQIGCLLGRGGHIVSEMRRATGA 165
+ ++ I+ A V RL+V + Q G L+G+GG + E+R +TGA
Sbjct: 72 FAM--IIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGA 129
Query: 166 SIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKRPGPNNGHSY- 224
++V D P + + + + G S+ + + I + ET+ P G +
Sbjct: 130 QVQV-AGDMLP---NSTERAITIAGIPQSIIECVKQICVVMLETL----SQSPPKGVTIP 181
Query: 225 LPPFPEMPPPPFRPRHNPASPGSYPSPVGPFHSMDRGMGPSQPFDHQAAFSHGMDPMVPP 284
P P P F G Y P P HQ A PM
Sbjct: 182 YRPKPSSSPVIFAGGQAYTIQGQYAIP-----------QPDLTKLHQLAMQQSHFPMT-- 228
Query: 285 NSDRIPFPYGSERPGHGPTFDRPPSPRSWTPQGVGGGDPRGFDASSGFTPRNRPVESGNH 344
HG T G G DAS+
Sbjct: 229 ---------------HGNT-----------------GFSAGLDASA-------------- 242
Query: 345 AAILTSTTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATEGVVMVSGTS 404
+T+ E+ IP + + G + ++ IRQ+SGA + + +P G+T+ V ++G++
Sbjct: 243 ----QTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTITGSA 298
Query: 405 DQMRAAQSLIH 415
+ AQ LI+
Sbjct: 299 ASISLAQYLIN 309
>gi|383862495|ref|XP_003706719.1| PREDICTED: poly(rC)-binding protein 4-like isoform 2 [Megachile
rotundata]
Length = 560
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 82/165 (49%), Gaps = 12/165 (7%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMRH 109
+ +L+ +VGS+IGK G IV+ F+ E+GA I I+D ERIV ++ NS +
Sbjct: 18 LTIRLIMQGKEVGSIIGKKGEIVKRFREESGAKINISD--GSCPERIVTVTGPTNSIFKA 75
Query: 110 -----SPAQDAVMRVHSRIAEIGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATG 164
++ + H I G P + RL+V + Q G L+G+GG + E+R TG
Sbjct: 76 FTLICKKFEEWCSQFHD-IQSGGGVPRPPITLRLIVPASQCGSLIGKGGSKIKEIREVTG 134
Query: 165 ASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRET 209
ASI+V + P + V + G ++ ++HI + E+
Sbjct: 135 ASIQVA-SEMLPNS---TERAVTISGTSEAITQCIYHICCVMLES 175
Score = 42.7 bits (99), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 40/67 (59%), Gaps = 2/67 (2%)
Query: 137 RLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQ 196
+ V ++ IGC++G+GG ++E+R+ +GA IR+ ++ R G D + + GN +V
Sbjct: 369 EMTVPNELIGCIIGKGGTKIAEIRQISGAMIRISNCEE--REGGATDRTITITGNPDAVA 426
Query: 197 DALFHIT 203
A + I+
Sbjct: 427 LAQYLIS 433
Score = 40.8 bits (94), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 51/104 (49%), Gaps = 5/104 (4%)
Query: 314 TPQGVGGGDPRGFDASSGFTPRNRPVESGNHAAILTSTTIEVVIPQLYMAHVYGENNSNL 373
TP GG +P A +G R AA + T E+ +P + + G+ + +
Sbjct: 331 TPANTGGLNPAALAALAGSQLRTSNTNRQQPAA--NNQTHEMTVPNELIGCIIGKGGTKI 388
Query: 374 SHIRQISGANVVVNDPKP---GATEGVVMVSGTSDQMRAAQSLI 414
+ IRQISGA + +++ + GAT+ + ++G D + AQ LI
Sbjct: 389 AEIRQISGAMIRISNCEEREGGATDRTITITGNPDAVALAQYLI 432
Score = 39.7 bits (91), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 38/80 (47%), Gaps = 7/80 (8%)
Query: 129 EPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAPRCGSPHDEIVQV 188
+P + RL++ +++G ++G+ G IV R +GA I + GS + IV V
Sbjct: 13 DPSVTLTIRLIMQGKEVGSIIGKKGEIVKRFREESGAKINISD-------GSCPERIVTV 65
Query: 189 IGNYHSVQDALFHITSRLRE 208
G +S+ A I + E
Sbjct: 66 TGPTNSIFKAFTLICKKFEE 85
Score = 38.5 bits (88), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 40/70 (57%), Gaps = 5/70 (7%)
Query: 352 TIEVVIPQLYMAHVYGENNSNLSHIRQISGANV-VVNDPKPGATEGVVMVSGTSDQMRAA 410
T+ +++P + G+ S + IR+++GA++ V ++ P +TE V +SGTS+ +
Sbjct: 105 TLRLIVPASQCGSLIGKGGSKIKEIREVTGASIQVASEMLPNSTERAVTISGTSEAI--T 162
Query: 411 QSLIHAFILC 420
Q + H I C
Sbjct: 163 QCIYH--ICC 170
>gi|363747265|ref|XP_003643961.1| PREDICTED: poly(rC)-binding protein 2-like isoform 3 [Gallus
gallus]
Length = 320
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 88/371 (23%), Positives = 149/371 (40%), Gaps = 71/371 (19%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMRH 109
+ +LL H +VGS+IGK G V+ + E+GA I I++ + ERI+ ++ N+ +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISE--GNCPERIITLAGPTNAIFKA 71
Query: 110 SPAQDAVMRVHSRIAEIGFEPGQA----VVARLLVHSQQIGCLLGRGGHIVSEMRRATGA 165
+ ++ I+ A V RL+V + Q G L+G+GG + E+R +TGA
Sbjct: 72 FAM--IIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGA 129
Query: 166 SIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKRPGPNNGHSY- 224
++V D P + + + + G S+ + + I + E+ P G +
Sbjct: 130 QVQV-AGDMLP---NSTERAITIAGIPQSIIECVKQICVVMLES--------PPKGVTIP 177
Query: 225 LPPFPEMPPPPFRPRHNPASPGSYPSPVGPFHSMDRGMGPSQPFDHQAAFSHGMDPMVPP 284
P P P F G Y P P HQ A PM
Sbjct: 178 YRPKPSSSPVIFAGGQAYTIQGQYAIP-----------QPDLTKLHQLAMQQSHFPM--- 223
Query: 285 NSDRIPFPYGSERPGHGPTFDRPPSPRSWTPQGVGGGDPRGFDASSGFTPRNRPVESGNH 344
HG T GF +P + +G
Sbjct: 224 --------------SHGNT---------------------GFSGIESSSPEVKGYWAGLD 248
Query: 345 AAILTSTTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATEGVVMVSGTS 404
A+ T T+ E+ IP + + G + ++ IRQ+SGA + + +P G+T+ V ++G++
Sbjct: 249 ASAQT-TSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTITGSA 307
Query: 405 DQMRAAQSLIH 415
+ AQ LI+
Sbjct: 308 ASISLAQYLIN 318
>gi|354490195|ref|XP_003507245.1| PREDICTED: poly(rC)-binding protein 2 isoform 3 [Cricetulus
griseus]
Length = 349
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 92/378 (24%), Positives = 160/378 (42%), Gaps = 67/378 (17%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMRH 109
+ +LL H +VGS+IGK G V+ + E+GA I I++ + ERI+ ++ N+ +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISE--GNCPERIITLAGPTNAIFKA 71
Query: 110 SPAQDAVMRVHSRIAEIGFEPGQA----VVARLLVHSQQIGCLLGRGGHIVSEMRRATGA 165
+ ++ I+ A V RL+V + Q G L+G+GG + E+R +TGA
Sbjct: 72 FAM--IIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGA 129
Query: 166 SIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKRPGPNNGHSYL 225
++V D P + + + + G S+ + + I + E+ P G +
Sbjct: 130 QVQV-AGDMLP---NSTERAITIAGIPQSIIECVKQICVVMLES--------PPKGVTI- 176
Query: 226 PPFPEMPPPPFRPRHNPASPGSYPSPVGPFHSMDRGMGPSQPFDHQAAFSHGMDPMVPPN 285
P+RP+ P+S SPV DR +S G
Sbjct: 177 ---------PYRPK--PSS-----SPVIFAGGQDR-------------YSTG-------- 199
Query: 286 SDRIPFPYGSERPGHGPTFDRPPSPRSWTPQGVGGGDPRGFDASSGFTPRNR--PVESGN 343
SD FP+ + P + PP ++T QG + P+ GN
Sbjct: 200 SDSASFPHTTPSMCLNPDLEGPP-LEAYTIQGQYAIPQPDLTKLHQLAMQQSHFPMTHGN 258
Query: 344 HA------AILTSTTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATEGV 397
A +T+ E+ IP + + G + ++ IRQ+SGA + +P G+T+
Sbjct: 259 TGFSAGLDASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKTANPVEGSTDRQ 318
Query: 398 VMVSGTSDQMRAAQSLIH 415
V ++G++ + AQ LI+
Sbjct: 319 VTITGSAASISLAQYLIN 336
>gi|405977635|gb|EKC42074.1| Poly(rC)-binding protein 3 [Crassostrea gigas]
Length = 439
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 88/370 (23%), Positives = 151/370 (40%), Gaps = 49/370 (13%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMRH 109
+ +++ +VGS+IGK G ++ F+ ++GA I I+D ERIV ++ +E H
Sbjct: 12 LTVRMIMQGKEVGSIIGKKGDNIKKFREDSGAKINISD--GSCPERIVTVTG--TTECIH 67
Query: 110 SPAQDAVMRVHSRIAEIGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRV 169
+ + P V RL+V + Q G L+G+GG + E+R TGASI+V
Sbjct: 68 KAFTMICKKFEEDLQNTPTVPKPPVTLRLVVPASQCGSLIGKGGSKIKEIRETTGASIQV 127
Query: 170 FPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKRPGPNNGHSYLPPFP 229
+ P + + V V G ++ + +I S + E+ P P P
Sbjct: 128 -ASEMLP---NSTERAVTVSGTADAITLCIQNICSIMLES-------PPKGATIQYRPKP 176
Query: 230 EMPPPPFRPRHNPASPGSYPSPVGPFHSMDRGMGPSQPFDHQAAFSHGMDPMVPPNSDRI 289
+PP F PG +G+ S+ +R+
Sbjct: 177 VVPPVIFAGGQAYTVPGQM-----------QGVQASE-------------------KERL 206
Query: 290 PFPYGSERPGHGPTFDRP-PSPRSWTPQGVGGGDPRGFDASSGFTPR--NRPVESGNHAA 346
P H + +P P +PQ + P G + PR N ++
Sbjct: 207 GIPKMELSKLHQLSLGQPIPIIPCTSPQLIQATMP-GLPHMAAAYPRATNTVPQALPAQP 265
Query: 347 ILTSTTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATEGVVMVSGTSDQ 406
TT E+ IP + + G ++ IRQ+SGA + +++ + GA + V ++GT +
Sbjct: 266 QQQQTTTEMAIPNDLIGCIIGRGGQKINEIRQMSGAMIKISNAEEGAPDRKVTITGTPET 325
Query: 407 MRAAQSLIHA 416
+ AQ LI+
Sbjct: 326 IGLAQYLINT 335
>gi|224116392|ref|XP_002317286.1| predicted protein [Populus trichocarpa]
gi|222860351|gb|EEE97898.1| predicted protein [Populus trichocarpa]
Length = 363
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 88/177 (49%), Gaps = 22/177 (12%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVI--------SA 101
+V+++LC +GS+IGK G ++ + ++E+ A +K+ D P +++RI+ I
Sbjct: 36 IVYRILCPDGVIGSVIGKSGKVINSIRHESRARVKVVDPFPGAKDRIITIYCHIKEKEDV 95
Query: 102 RENSEMRHS----PAQDAVMRVHSRIAEIGFEPGQAVV-------ARLLVHSQQIGCLLG 150
+ + H+ AQDA+++VH+ I+ G + ++LV + Q ++G
Sbjct: 96 DVDDDFNHTNPLCAAQDALLKVHAAISNAVASLGDSDKRLRDKEECQILVPASQSANIIG 155
Query: 151 RGGHIVSEMRRATGASIRVFPKDQAP---RCGSPHDEIVQVIGNYHSVQDALFHITS 204
+ G + +R T SI++ KD C D + + G +V+ ALF +++
Sbjct: 156 KAGATIKRLRSKTRTSIKIIAKDSTDPTHSCAMDFDNFLLITGESEAVKKALFAVSA 212
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 39/56 (69%)
Query: 48 EEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARE 103
EE++ ++LC DK+G +IGKGGS +++ + +GA I++ D D +E I+ ++A E
Sbjct: 305 EELIIRVLCPFDKIGRVIGKGGSTIKSIRQASGARIEVDDTKADRDECIITVTATE 360
>gi|196009850|ref|XP_002114790.1| hypothetical protein TRIADDRAFT_28388 [Trichoplax adhaerens]
gi|190582852|gb|EDV22924.1| hypothetical protein TRIADDRAFT_28388 [Trichoplax adhaerens]
Length = 360
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 99/402 (24%), Positives = 163/402 (40%), Gaps = 109/402 (27%)
Query: 48 EEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIA---DILPDSEERIVVISAREN 104
++VV KLL GS+IGKGG ++ QN++ I+++ D P ++ER++VI+
Sbjct: 20 DKVVLKLLIPNYAAGSIIGKGGDVINDLQNDSKTRIRLSHNNDTFPGTKERVIVITG--- 76
Query: 105 SEMRHSPAQDAVMRVHSRIAEIGFEPGQAVVA--------------RLLVHSQQIGCLLG 150
+ V +V+ I E E G+A A +++V + G ++G
Sbjct: 77 -------SIAGVRQVNRFILEKVSEEGKADKAIQYGVLDKNRNRQLKMIVPNAAAGVIIG 129
Query: 151 RGGHIVSEMRRATGASIRVFPKDQAPRCGSPHDE-IVQVIGNYHSVQDALFHITSRLRET 209
+GG + E++ +GA ++V K + DE I+ V G ++ A I + E
Sbjct: 130 KGGSNIKEIQDKSGAHVQVSQK----KAQYAIDERILTVTGEFNERLTAWELIIWKCLED 185
Query: 210 IFPMKRPGPNNGHSYLPPFPEMPPPPFRPRHNPASPGSYPSPVGPFHSMDRGMGPS--QP 267
I + P + +S++ P +P HS G G + +P
Sbjct: 186 INNL--PNTSVSYSHVEPAGTLP---------------------ALHSNYYGGGNANDRP 222
Query: 268 FDHQAAFSHGMDPMVPPNSDRIPFPYGSERPGHGPT-------FDRPPSPRSWTPQGVGG 320
D AA PY SER + PT DR +S+ P
Sbjct: 223 MDSSAASYD---------------PYTSER--YSPTQVTQDAQADRQYGMQSYPP----- 260
Query: 321 GDPRGFDASSGFTPR-NRPVESGNHAAILTSTTIEVVIPQLYMAHVYGENNSNLSHIRQI 379
T R NRP G T I++ +P + + G+ +S I+ I
Sbjct: 261 ------------TARNNRPSSYG-------ETVIKIPVPDSIIGAILGKRGKVISDIQNI 301
Query: 380 SGANVVVN---DPKPGATEGVVMVSGTSDQMRAAQSLIHAFI 418
SGA++ V+ D PG + V V+GT+D A LI ++
Sbjct: 302 SGAHIQVSQRGDYIPGTKDREVTVTGTNDAAHYADKLIKGYL 343
>gi|417398902|gb|JAA46484.1| Putative polyc-binding alphacp-1 [Desmodus rotundus]
Length = 320
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 89/372 (23%), Positives = 146/372 (39%), Gaps = 81/372 (21%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMRH 109
+ +LL H +VGS+IGK G V+ + E+GA I I++ + ERI+ ++ N+ +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISE--GNCPERIITLAGPTNAIFKA 71
Query: 110 SPAQDAVMRVHSRIAEIGFEPGQA----VVARLLVHSQQIGCLLGRGGHIVSEMRRATGA 165
+ ++ I+ A V RL+V + Q G L+G+GG + E+R +TGA
Sbjct: 72 FAM--IIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGA 129
Query: 166 SIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKRPGPNNGHSY- 224
++V D P + + + + G S+ + + I + ET+ P G +
Sbjct: 130 QVQV-AGDMLP---NSTERAITIAGIPQSIIECVKQICVVMLETL----SQSPPKGVTIP 181
Query: 225 LPPFPEMPPPPFRPRHNPASPGSYPSPVGPFHSMDRGMGPSQPFDHQAAFSHGMDPMVPP 284
P P P F G Y P P HQ A PM
Sbjct: 182 YRPKPSSSPVIFAGGQAYTIQGQYAIP-----------QPDLTKLHQLAMQQSHFPMT-- 228
Query: 285 NSDRIPFPYGSERPGHGPTFDRPPSPRSWTPQGVGGGDPRGFDASSGFTPRNRPVESGNH 344
HG T G DAS+
Sbjct: 229 ---------------HGNT-----------------GFSASLDAST-------------- 242
Query: 345 AAILTSTTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATEGVVMVSGTS 404
TT E+ IP + + G +N++ IRQ+SGA + + +P G++ V ++G++
Sbjct: 243 -----QTTHELTIPNNLIGCIIGRQGANINEIRQMSGAQIKIANPVEGSSGRQVTITGSA 297
Query: 405 DQMRAAQSLIHA 416
+ AQ LI+A
Sbjct: 298 ASISLAQYLINA 309
>gi|410899813|ref|XP_003963391.1| PREDICTED: poly(rC)-binding protein 4-like [Takifugu rubripes]
Length = 447
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 93/387 (24%), Positives = 161/387 (41%), Gaps = 86/387 (22%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMR- 108
+ +LL H +VGS+IGK G V+ + E+ A + I++ ERI+ I+ + R
Sbjct: 16 LTLRLLMHGKEVGSIIGKKGETVKRIREESSARVNISE--GSCPERIITITGSTDCVFRA 73
Query: 109 -----HSPAQDAVMRVHSRIAEIGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRAT 163
H +D V + I +P V RL++ + Q G L+G+GG + E+R +T
Sbjct: 74 FTMITHKLEEDLAALVAN--GTISTKP--PVTLRLVIPASQCGSLIGKGGAKIKEIREST 129
Query: 164 GASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKRPGPNNGHS 223
GA I+V D P + + V + GN SV + I + + E+ P G +
Sbjct: 130 GAQIQV-AGDLLP---NSTERGVTISGNQDSVIQCVKLICTVILES--------PPKGAT 177
Query: 224 YLPPFPEMPPPPFRPRHNPASP--------GSYPSPVGPFHSMDRGMGPSQPFDHQAAFS 275
P+RP +PA+ + P +S+ +G D Q A++
Sbjct: 178 I----------PYRPSPSPAAVLIAGNQLFDASEFATHPMYSVAQG-----GLDLQQAYT 222
Query: 276 ----HGMDPMVPPNSDRIPFPYGSERPGHGPTFDRPPSPRSWTPQGVGGGDPRGFDASSG 331
+G+ P+S+ S + G P +P S P G D++S
Sbjct: 223 LQNQYGI-----PHSELAKLHQLSMQQGLNP-IAQPASTV----------IPAGMDSNS- 265
Query: 332 FTPRNRPVESGNHAAILTSTTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKP 391
T+ E++IP + + G + ++ IRQ+SGA + +
Sbjct: 266 ------------------QTSQELLIPNDLIGSIIGRQGTKINEIRQVSGAQIKIGSQLD 307
Query: 392 GATEGVVMVSGTSDQMRAAQSLIHAFI 418
G ++ V ++GT + AQ LI + +
Sbjct: 308 GTSDRHVTITGTPVSINLAQYLITSCL 334
Score = 39.3 bits (90), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 22/87 (25%), Positives = 41/87 (47%), Gaps = 7/87 (8%)
Query: 131 GQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAPRCGSPHDEIVQVIG 190
G + RLL+H +++G ++G+ G V +R + A + + GS + I+ + G
Sbjct: 13 GVTLTLRLLMHGKEVGSIIGKKGETVKRIREESSARVNISE-------GSCPERIITITG 65
Query: 191 NYHSVQDALFHITSRLRETIFPMKRPG 217
+ V A IT +L E + + G
Sbjct: 66 STDCVFRAFTMITHKLEEDLAALVANG 92
>gi|348503027|ref|XP_003439068.1| PREDICTED: poly(rC)-binding protein 4-like [Oreochromis niloticus]
Length = 446
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 92/397 (23%), Positives = 155/397 (39%), Gaps = 107/397 (26%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMRH 109
+ +LL H +VGS+IGK G V+ + E+ A + I++ ERI+ I+
Sbjct: 16 LTLRLLMHGKEVGSIIGKKGETVKRIREESSARVNISE--GSCPERIITITG-------- 65
Query: 110 SPAQDAVMRVHSRIAEIGFEPGQAVVA------------RLLVHSQQIGCLLGRGGHIVS 157
+ D+V R + I E A+VA RL++ + Q G L+G+GG +
Sbjct: 66 --STDSVFRAFTMITYKLEEDLTALVANGTISSKPPVTLRLVIPASQCGSLIGKGGAKIK 123
Query: 158 EMRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKRPG 217
E+R +TGA I+V D P + + V + GN SV + I + + E+
Sbjct: 124 EIRESTGAQIQV-AGDLLP---NSTERGVTISGNQDSVIQCVKLICTVILES-------- 171
Query: 218 PNNGHSYLPPFPEMPPPPFRPRHNPASPGSYPSPVGPFHSMDR-GMGPSQPFD------- 269
P G + +P P P N S +P P +S+ + G+ Q +
Sbjct: 172 PPKGAT-IPYRPSPSPAALLIAGNQVFEASEFAP-HPLYSVAQGGLDLQQAYTLQNQYGI 229
Query: 270 --------HQAAFSHGMDPMVPPNSDRIPFPYGSERPGHGPTFDRPPSPRSWTPQGVGGG 321
HQ + G+ P+ P S IP
Sbjct: 230 PHSELAKLHQLSVQQGLSPIAQPASAVIP------------------------------- 258
Query: 322 DPRGFDASSGFTPRNRPVESGNHAAILTSTTIEVVIPQLYMAHVYGENNSNLSHIRQISG 381
G D++S T+ E++IP + + G + ++ IRQ+SG
Sbjct: 259 ---GMDSNS-------------------QTSQELLIPNDLIGSIIGRQGTKINEIRQVSG 296
Query: 382 ANVVVNDPKPGATEGVVMVSGTSDQMRAAQSLIHAFI 418
A + + G ++ V ++GT + AQ LI + +
Sbjct: 297 AQIKIGSQLDGTSDRHVTITGTPVSINLAQYLITSCL 333
Score = 40.4 bits (93), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 42/87 (48%), Gaps = 7/87 (8%)
Query: 131 GQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAPRCGSPHDEIVQVIG 190
G + RLL+H +++G ++G+ G V +R + A + + GS + I+ + G
Sbjct: 13 GVTLTLRLLMHGKEVGSIIGKKGETVKRIREESSARVNISE-------GSCPERIITITG 65
Query: 191 NYHSVQDALFHITSRLRETIFPMKRPG 217
+ SV A IT +L E + + G
Sbjct: 66 STDSVFRAFTMITYKLEEDLTALVANG 92
>gi|242039711|ref|XP_002467250.1| hypothetical protein SORBIDRAFT_01g022040 [Sorghum bicolor]
gi|241921104|gb|EER94248.1| hypothetical protein SORBIDRAFT_01g022040 [Sorghum bicolor]
Length = 588
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 82/164 (50%), Gaps = 4/164 (2%)
Query: 51 VFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMRHS 110
VF++L KVG +IG G VR ET A ++I + E+ V+I RE E
Sbjct: 56 VFRMLIPAQKVGVIIGHKGERVRRLCEETRACVRIIGGHLCAAEQAVIIFGREQPEEPLP 115
Query: 111 PAQDAVMRVHSR-IAEIGFEPGQ--AVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASI 167
PA DA++RV+ + I + + G +V R+LV S+Q L+G G +++ + A+ I
Sbjct: 116 PAMDALLRVYQQTINDESLDVGSDGVIVRRILVPSEQAESLIGEHGVMINSIMEASQTDI 175
Query: 168 RVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIF 211
RV D P D +V++ G V AL + S LR+ +
Sbjct: 176 RVLDGDLPP-VALEEDRVVEIWGLPARVHKALELVASHLRKYLV 218
>gi|224153471|ref|XP_002337357.1| predicted protein [Populus trichocarpa]
gi|222838904|gb|EEE77255.1| predicted protein [Populus trichocarpa]
Length = 103
Score = 72.8 bits (177), Expect = 3e-10, Method: Composition-based stats.
Identities = 34/81 (41%), Positives = 52/81 (64%), Gaps = 1/81 (1%)
Query: 134 VVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYH 193
++ RLLV S ++GC+LG+G ++EMRR A I V+PK++ P+C S +E+VQ+ GNY
Sbjct: 1 MITRLLVPSSKVGCILGQGSQDINEMRRLQ-AEICVYPKNEKPKCASEDEELVQISGNYG 59
Query: 194 SVQDALFHITSRLRETIFPMK 214
+D L I S + + MK
Sbjct: 60 VAKDVLVDIASDSEQELCMMK 80
>gi|354490193|ref|XP_003507244.1| PREDICTED: poly(rC)-binding protein 2 isoform 2 [Cricetulus
griseus]
Length = 331
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 88/371 (23%), Positives = 148/371 (39%), Gaps = 71/371 (19%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMRH 109
+ +LL H +VGS+IGK G V+ + E+GA I I++ + ERI+ ++ N+ +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISE--GNCPERIITLAGPTNAIFKA 71
Query: 110 SPAQDAVMRVHSRIAEIGFEPGQA----VVARLLVHSQQIGCLLGRGGHIVSEMRRATGA 165
+ ++ I+ A V RL+V + Q G L+G+GG + E+R +TGA
Sbjct: 72 FAM--IIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGA 129
Query: 166 SIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKRPGPNNGHSY- 224
++V D P + + + + G S+ + + I + E+ P G +
Sbjct: 130 QVQV-AGDMLP---NSTERAITIAGIPQSIIECVKQICVVMLES--------PPKGVTIP 177
Query: 225 LPPFPEMPPPPFRPRHNPASPGSYPSPVGPFHSMDRGMGPSQPFDHQAAFSHGMDPMVPP 284
P P P F G Y P P HQ A PM
Sbjct: 178 YRPKPSSSPVIFAGGQAYTIQGQYAIP-----------QPDLTKLHQLAMQQSHFPMT-- 224
Query: 285 NSDRIPFPYGSERPGHGPTFDRPPSPRSWTPQGVGGGDPRGFDASSGFTPRNRPVESGNH 344
HG T GF +P + +G
Sbjct: 225 ---------------HGNT---------------------GFSGIESSSPEVKGYWAGLD 248
Query: 345 AAILTSTTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATEGVVMVSGTS 404
A+ T T+ E+ IP + + G + ++ IRQ+SGA + +P G+T+ V ++G++
Sbjct: 249 ASAQT-TSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKTANPVEGSTDRQVTITGSA 307
Query: 405 DQMRAAQSLIH 415
+ AQ LI+
Sbjct: 308 ASISLAQYLIN 318
>gi|432112571|gb|ELK35287.1| Poly(rC)-binding protein 2 [Myotis davidii]
Length = 453
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 91/381 (23%), Positives = 161/381 (42%), Gaps = 67/381 (17%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMRH 109
+ +LL H +VGS+IGK G V+ + E+GA I I++ + ERI+ ++ N+ +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISE--GNCPERIITLAGPTNAIFKA 71
Query: 110 SPAQDAVMRVHSRIAEIGFEPGQA----VVARLLVHSQQIGCLLGRGGHIVSEMRRATGA 165
+ ++ I+ A V RL+V + Q G L+G+GG + E+R +TGA
Sbjct: 72 FAM--IIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGA 129
Query: 166 SIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKRPGPNNGHSYL 225
++V D P + + + + G S+ + + I + E+ P G +
Sbjct: 130 QVQV-AGDMLP---NSTERAITIAGIPQSIIECVKQICVVMLES--------PPKGVTI- 176
Query: 226 PPFPEMPPPPFRPRHNPASPGSYPSPVGPFHSMDRGMGPSQPFDHQAAFSHGMDPMVPPN 285
P+RP+ P+S SPV DR +S G
Sbjct: 177 ---------PYRPK--PSS-----SPVIFAGGQDR-------------YSTG-------- 199
Query: 286 SDRIPFPYGSERPGHGPTFDRPPSPRSWTPQGVGGGDPRGFDASSGFTPRNR--PVESGN 343
SD FP+ + P + PP ++T QG + P+ GN
Sbjct: 200 SDSASFPHTTPSMCLNPDLEGPPL-EAYTIQGQYAIPQPDLTKLHQLAMQQSHFPMTHGN 258
Query: 344 HA------AILTSTTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATEGV 397
A +T+ E+ IP + + G + ++ I Q+SGA + + +P G+T+
Sbjct: 259 TGFSAGLDASAQTTSHELTIPNDLIGCIIGRQGAKINEIHQMSGAQIKIANPVEGSTDRQ 318
Query: 398 VMVSGTSDQMRAAQSLIHAFI 418
V ++G++ + AQ LI+ +
Sbjct: 319 VTITGSAASISLAQYLINVSL 339
>gi|62087230|dbj|BAD92062.1| poly(rC)-binding protein 2 isoform b variant [Homo sapiens]
Length = 373
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 93/393 (23%), Positives = 166/393 (42%), Gaps = 85/393 (21%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMRH 109
+ +LL H +VGS+IGK G V+ + E+GA I I++ + ERI+ ++ N+ +
Sbjct: 26 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISE--GNCPERIITLAGPTNAIFKA 83
Query: 110 SPAQDAVMRVHSRIAEIGFEPGQA----VVARLLVHSQQIGCLLGRGGHIVSEMRRATGA 165
+ ++ I+ A V RL+V + Q G L+G+GG + E+R +TGA
Sbjct: 84 FAM--IIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGA 141
Query: 166 SIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKRPGPNNGHSYL 225
++V D P + + + + G S+ + + I + E+ P G +
Sbjct: 142 QVQV-AGDMLP---NSTERAITIAGIPQSIIECVKQICVVMLES--------PPKGVTI- 188
Query: 226 PPFPEMPPPPFRPRHNPASPGSYPSPVGPFHSMDRGMGPSQPFDHQAAFSHGMDPMVPPN 285
P+RP+ P+S SPV DR +S G
Sbjct: 189 ---------PYRPK--PSS-----SPVIFAGGQDR-------------YSTG-------- 211
Query: 286 SDRIPFPYGSERPGHGPTFDRPPSPRSWTPQG-----------------------VGGGD 322
SD FP+ + P + PP ++T QG + G+
Sbjct: 212 SDSASFPHTTPSMCLNPDLEGPPL-EAYTIQGQYAIPQPDLTKLHQLAMQQSHFPMTHGN 270
Query: 323 PRGFDASSGFTPRNRPVESGNHAAILTSTTIEVVIPQLYMAHVYGENNSNLSHIRQISGA 382
GF +P + + +A +T+ E+ IP + + G + ++ IRQ+SGA
Sbjct: 271 -TGFSGIESSSPEVKGYWGLDASA--QTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGA 327
Query: 383 NVVVNDPKPGATEGVVMVSGTSDQMRAAQSLIH 415
+ + +P G+T+ V ++G++ + AQ LI+
Sbjct: 328 QIKIANPVEGSTDRQVTITGSAASISLAQYLIN 360
>gi|413935392|gb|AFW69943.1| hypothetical protein ZEAMMB73_108333 [Zea mays]
Length = 397
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 100/207 (48%), Gaps = 22/207 (10%)
Query: 51 VFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSE---ERIVVISARENSEM 107
VF+L+ DKVG +IG+ G ++ +ET A +++ D P + RIV++SARE E
Sbjct: 99 VFRLVVPADKVGGIIGRRGDTIKRLCDETRARVRVLD-APHGDGAFSRIVLVSAREEVEA 157
Query: 108 RHSPAQDAVMRVHSRIAEIG--------FEPGQAVVA-RLLVHSQQIGCLLGRGGHIVSE 158
SPA +A +++ I EI P + + RLLV Q ++G+ G +
Sbjct: 158 ELSPAMNAAIKIFKHINEIEDINSDGTLMAPAPEISSVRLLVPFAQALHVIGKQGVTIKS 217
Query: 159 MRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKRPGP 218
++ +TG+++R+ +D+ + + IV++ G V +AL + LR+ +
Sbjct: 218 IQESTGSTVRIMDEDELLSHETMGERIVEINGASLEVLNALKLVLGLLRKFLV------- 270
Query: 219 NNGHSYLPPFPEMPPPPFRPRHNPASP 245
H L F P +P+ + +P
Sbjct: 271 --DHGVLHLFERKNPEVAQPQQSRGNP 295
Score = 40.4 bits (93), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 37/75 (49%), Gaps = 1/75 (1%)
Query: 346 AILTSTTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATEGVVMVSGTSD 405
+++T T + IP + + G N+ IR +SGA VV+ G E VM+ GT
Sbjct: 322 SLITKITRTMQIPLADVGEIIGVRGENVELIRSVSGAVVVLEKIGNG-QEVRVMIEGTPS 380
Query: 406 QMRAAQSLIHAFILC 420
Q++ A L+ + C
Sbjct: 381 QVQTAHQLVQVLVEC 395
>gi|358343600|ref|XP_003635888.1| Poly(rC)-binding protein [Medicago truncatula]
gi|358344098|ref|XP_003636130.1| Poly(rC)-binding protein [Medicago truncatula]
gi|355501823|gb|AES83026.1| Poly(rC)-binding protein [Medicago truncatula]
gi|355502065|gb|AES83268.1| Poly(rC)-binding protein [Medicago truncatula]
Length = 241
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 53/156 (33%), Positives = 76/156 (48%), Gaps = 11/156 (7%)
Query: 265 SQPFDHQAAFSHGMDPMVPPNSDRIPFPYGSERPGHGPTFDRPPSPRSWTPQGVGGGDPR 324
+ P ++ + P P N D + + + + P F R P PQ G +
Sbjct: 91 NNPLTNEVLAEARIKPSFPLNKDTVRSKFITRKKSSFP-FARVP------PQNAGVYQAK 143
Query: 325 GF-DASSGFTPRNRPVE--SGNHAAILTSTTIEVVIPQLYMAHVYGENNSNLSHIRQISG 381
+ T VE GN A +T+TT+E+++ + VYGE+ NL IRQISG
Sbjct: 144 KVTENGESHTNLIENVEPGRGNIVATVTNTTVEIIVSEHVFGSVYGEDGGNLDRIRQISG 203
Query: 382 ANVVVNDP-KPGATEGVVMVSGTSDQMRAAQSLIHA 416
A+V V DP G + G V++SGT DQ AAQSL+ A
Sbjct: 204 ADVTVFDPSSTGTSGGKVVISGTPDQTFAAQSLLQA 239
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 44/67 (65%), Gaps = 3/67 (4%)
Query: 141 HSQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALF 200
HS Q+G ++G+GG +S +R +G++IRV P AP C + +E++ + G Y +++AL
Sbjct: 27 HSSQVGAIVGKGGKNISNIRNNSGSNIRVCP---APHCAAKDEELILITGGYRCIENALR 83
Query: 201 HITSRLR 207
ITS +R
Sbjct: 84 KITSIIR 90
>gi|358335626|dbj|GAA29562.2| RNA-binding protein Nova [Clonorchis sinensis]
Length = 673
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 86/180 (47%), Gaps = 36/180 (20%)
Query: 46 YEEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIA---DILPDSEERIVVISAR 102
YE V FK+L G++IGKGG + QN+T A +K++ D P + ER+ +I
Sbjct: 24 YEGNVHFKILVPSIAAGAIIGKGGEAITDIQNKTSAKVKMSKANDFYPGTTERVCLIVG- 82
Query: 103 ENSEMRHSPAQDAVMRVHSRIAEIGFEPGQAVV----------------ARLLVHSQQIG 146
D+++RV I+E +E ++++ ++LV + G
Sbjct: 83 ---------TIDSILRVFQYISEKIYEKPESILRSTNKGGRMPAERHKQVKILVPNSTAG 133
Query: 147 CLLGRGGHIVSEMRRATGASIRVFPKDQ----APRCGSPHDEIVQVIGNYHSVQDALFHI 202
++G+GG + E++ +TG I+V K + A RC + E+ Q + +V+ LF I
Sbjct: 134 IIIGKGGSFIKEVKESTGVFIQVSQKSKELNLAERCVTVAGELPQT---FEAVKQLLFKI 190
>gi|291402366|ref|XP_002717547.1| PREDICTED: poly(rC) binding protein 2-like [Oryctolagus cuniculus]
Length = 334
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 89/371 (23%), Positives = 150/371 (40%), Gaps = 68/371 (18%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMRH 109
+ +LL H +VGS+IGK G V+ + E+GA I I++ + ERI+ ++ N+ +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVK-MREESGARINISE--GNCPERIITLAGPTNAIFKA 70
Query: 110 SPAQDAVMRVHSRIAEIGFEPGQA----VVARLLVHSQQIGCLLGRGGHIVSEMRRATGA 165
+ ++ I+ A V RL+V + Q G L+G+GG + E+R +TGA
Sbjct: 71 FAM--IIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGA 128
Query: 166 SIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKRPGPNNGHSY- 224
++V D P + + + + G S+ + + I + ET+ P G +
Sbjct: 129 QVQV-AGDMLP---NSTERAITIAGIPQSIIECVKQICVVMLETL----SQSPPKGVTIP 180
Query: 225 LPPFPEMPPPPFRPRHNPASPGSYPSPVGPFHSMDRGMGPSQPFDHQAAFSHGMDPMVPP 284
P P P F G Y P P HQ A PM
Sbjct: 181 YWPKPSSSPVIFAGGQAYTIQGQYAIP-----------QPDLTKLHQLAMQQSHFPMT-- 227
Query: 285 NSDRIPFPYGSERPGHGPTFDRPPSPRSWTPQGVGGGDPRGFDASSGFTPRNRPVESGNH 344
HG T GF +P + +G
Sbjct: 228 ---------------HGNT---------------------GFSGIESSSPEVKGYWAGLD 251
Query: 345 AAILTSTTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATEGVVMVSGTS 404
A+ T T+ E+ IP + + G + ++ IRQ+SGA + + +P G+T+ V ++G++
Sbjct: 252 ASAQT-TSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTITGSA 310
Query: 405 DQMRAAQSLIH 415
+ AQ LI+
Sbjct: 311 ASISLAQYLIN 321
>gi|193083110|ref|NP_001122384.1| poly(rC)-binding protein 2 isoform e [Homo sapiens]
gi|291389255|ref|XP_002711064.1| PREDICTED: poly(rC) binding protein 2-like isoform 1 [Oryctolagus
cuniculus]
gi|348581079|ref|XP_003476305.1| PREDICTED: poly(rC)-binding protein 2 isoform 3 [Cavia porcellus]
gi|184186908|gb|ACC69194.1| poly(rC) binding protein 2 [Mus musculus]
gi|208967068|dbj|BAG73548.1| poly(rC) binding protein 2 [synthetic construct]
Length = 361
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 93/393 (23%), Positives = 166/393 (42%), Gaps = 85/393 (21%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMRH 109
+ +LL H +VGS+IGK G V+ + E+GA I I++ + ERI+ ++ N+ +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISE--GNCPERIITLAGPTNAIFKA 71
Query: 110 SPAQDAVMRVHSRIAEIGFEPGQA----VVARLLVHSQQIGCLLGRGGHIVSEMRRATGA 165
+ ++ I+ A V RL+V + Q G L+G+GG + E+R +TGA
Sbjct: 72 FAM--IIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGA 129
Query: 166 SIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKRPGPNNGHSYL 225
++V D P + + + + G S+ + + I + E+ P G +
Sbjct: 130 QVQV-AGDMLP---NSTERAITIAGIPQSIIECVKQICVVMLES--------PPKGVTI- 176
Query: 226 PPFPEMPPPPFRPRHNPASPGSYPSPVGPFHSMDRGMGPSQPFDHQAAFSHGMDPMVPPN 285
P+RP+ P+S SPV DR +S G
Sbjct: 177 ---------PYRPK--PSS-----SPVIFAGGQDR-------------YSTG-------- 199
Query: 286 SDRIPFPYGSERPGHGPTFDRPPSPRSWTPQG-----------------------VGGGD 322
SD FP+ + P + PP ++T QG + G+
Sbjct: 200 SDSASFPHTTPSMCLNPDLEGPP-LEAYTIQGQYAIPQPDLTKLHQLAMQQSHFPMTHGN 258
Query: 323 PRGFDASSGFTPRNRPVESGNHAAILTSTTIEVVIPQLYMAHVYGENNSNLSHIRQISGA 382
GF +P + + +A +T+ E+ IP + + G + ++ IRQ+SGA
Sbjct: 259 -TGFSGIESSSPEVKGYWGLDASA--QTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGA 315
Query: 383 NVVVNDPKPGATEGVVMVSGTSDQMRAAQSLIH 415
+ + +P G+T+ V ++G++ + AQ LI+
Sbjct: 316 QIKIANPVEGSTDRQVTITGSAASISLAQYLIN 348
>gi|109065035|ref|XP_001099540.1| PREDICTED: poly(rC)-binding protein 3-like isoform 4 [Macaca
mulatta]
Length = 370
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 94/379 (24%), Positives = 157/379 (41%), Gaps = 64/379 (16%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMRH 109
+ +LL H +VGS+IGK G V+ + E+GA I I++ + ERIV I+ ++ +
Sbjct: 46 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE--GNCPERIVTITGPTDAIFK- 102
Query: 110 SPAQDAVMRVHSRIAEIGFEPGQA---VVARLLVHSQQIGCLLGRGGHIVSEMRRATGAS 166
+ A A I + P + V RL+V + Q G L+G+GG + E+R +TGA
Sbjct: 103 AFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQ 162
Query: 167 IRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKRPGPNNGHSYLP 226
++V D P + + V + G ++ + I + E+ P G +
Sbjct: 163 VQV-AGDMLP---NSTERAVTISGTPDAIIQCVKQICVVMLES--------PPKGATI-- 208
Query: 227 PFPEMPPPPFRPRHNPASPGSYPSPVGPFHSMDRGMGPSQPFDHQAAFSH-GMDPMVPPN 285
P+RP+ P S P + G + Q A H + +
Sbjct: 209 --------PYRPK-----PASTP--------VIFAGGQAYTIQGQYAIPHPDLTKLHQLA 247
Query: 286 SDRIPF-PYGSERPGHGPTFDRPPSPRSWTPQGVGGGDPRGFDASSGFTPRNRPVESGNH 344
+ PF P G P ++ P S Q + G G DAS P S +
Sbjct: 248 MQQTPFPPLGQTNPAF--PGEKLPLHSSEEAQNL-MGQSSGLDAS--------PPASTHE 296
Query: 345 AAILTSTTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATEGVVMVSGTS 404
I P + + G + ++ IRQ+SGA + + + G++E + ++GT
Sbjct: 297 LTI----------PNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQITITGTP 346
Query: 405 DQMRAAQSLIHAFILCGVT 423
+ AQ LI+A + VT
Sbjct: 347 ANISLAQYLINARLTSEVT 365
>gi|354490197|ref|XP_003507246.1| PREDICTED: poly(rC)-binding protein 2 isoform 4 [Cricetulus
griseus]
Length = 322
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 88/371 (23%), Positives = 146/371 (39%), Gaps = 80/371 (21%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMRH 109
+ +LL H +VGS+IGK G V+ + E+GA I I++ + ERI+ ++ N+ +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISE--GNCPERIITLAGPTNAIFKA 71
Query: 110 SPAQDAVMRVHSRIAEIGFEPGQA----VVARLLVHSQQIGCLLGRGGHIVSEMRRATGA 165
+ ++ I+ A V RL+V + Q G L+G+GG + E+R +TGA
Sbjct: 72 FAM--IIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGA 129
Query: 166 SIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKRPGPNNGHSY- 224
++V D P + + + + G S+ + + I + ET+ P G +
Sbjct: 130 QVQV-AGDMLP---NSTERAITIAGIPQSIIECVKQICVVMLETL----SQSPPKGVTIP 181
Query: 225 LPPFPEMPPPPFRPRHNPASPGSYPSPVGPFHSMDRGMGPSQPFDHQAAFSHGMDPMVPP 284
P P P F G Y P P HQ A PM
Sbjct: 182 YRPKPSSSPVIFAGGQAYTIQGQYAIP-----------QPDLTKLHQLAMQQSHFPMT-- 228
Query: 285 NSDRIPFPYGSERPGHGPTFDRPPSPRSWTPQGVGGGDPRGFDASSGFTPRNRPVESGNH 344
HG T G G DAS+
Sbjct: 229 ---------------HGNT-----------------GFSAGLDASA-------------- 242
Query: 345 AAILTSTTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATEGVVMVSGTS 404
+T+ E+ IP + + G + ++ IRQ+SGA + +P G+T+ V ++G++
Sbjct: 243 ----QTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKTANPVEGSTDRQVTITGSA 298
Query: 405 DQMRAAQSLIH 415
+ AQ LI+
Sbjct: 299 ASISLAQYLIN 309
>gi|119629730|gb|EAX09325.1| poly(rC) binding protein 3, isoform CRA_c [Homo sapiens]
Length = 370
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 94/379 (24%), Positives = 157/379 (41%), Gaps = 64/379 (16%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMRH 109
+ +LL H +VGS+IGK G V+ + E+GA I I++ + ERIV I+ ++ +
Sbjct: 46 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE--GNCPERIVTITGPTDAIFK- 102
Query: 110 SPAQDAVMRVHSRIAEIGFEPGQA---VVARLLVHSQQIGCLLGRGGHIVSEMRRATGAS 166
+ A A I + P + V RL+V + Q G L+G+GG + E+R +TGA
Sbjct: 103 AFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQ 162
Query: 167 IRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKRPGPNNGHSYLP 226
++V D P + + V + G ++ + I + E+ P G +
Sbjct: 163 VQV-AGDMLP---NSTERAVTISGTPDAIIQCVKQICVVMLES--------PPKGATI-- 208
Query: 227 PFPEMPPPPFRPRHNPASPGSYPSPVGPFHSMDRGMGPSQPFDHQAAFSH-GMDPMVPPN 285
P+RP+ P S P + G + Q A H + +
Sbjct: 209 --------PYRPK-----PASTP--------VIFAGGQAYTIQGQYAIPHPDLTKLHQLA 247
Query: 286 SDRIPF-PYGSERPGHGPTFDRPPSPRSWTPQGVGGGDPRGFDASSGFTPRNRPVESGNH 344
+ PF P G P ++ P S Q + G G DAS P S +
Sbjct: 248 MQQTPFPPLGQTNPAF--PGEKLPLHSSEEAQNL-MGQSSGLDAS--------PPASTHE 296
Query: 345 AAILTSTTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATEGVVMVSGTS 404
I P + + G + ++ IRQ+SGA + + + G++E + ++GT
Sbjct: 297 LTI----------PNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQITITGTP 346
Query: 405 DQMRAAQSLIHAFILCGVT 423
+ AQ LI+A + VT
Sbjct: 347 ANISLAQYLINARLTSEVT 365
>gi|26330216|dbj|BAC28838.1| unnamed protein product [Mus musculus]
Length = 370
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 94/379 (24%), Positives = 156/379 (41%), Gaps = 64/379 (16%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMRH 109
+ +LL H +VGS+IGK G V+ + E+GA I I++ + ERIV I+ ++ +
Sbjct: 46 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE--GNCPERIVTITGPTDAIFK- 102
Query: 110 SPAQDAVMRVHSRIAEIGFEPGQA---VVARLLVHSQQIGCLLGRGGHIVSEMRRATGAS 166
+ A A I + P + V RL+V + Q G L+G+GG + E+R +TGA
Sbjct: 103 AFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQ 162
Query: 167 IRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKRPGPNNGHSYLP 226
++V D P + V + G ++ + I + E+ P G +
Sbjct: 163 VQV-AGDMLPNS---TERAVTISGTPDAIIQCVKQICVVMLES--------PPKGATI-- 208
Query: 227 PFPEMPPPPFRPRHNPASPGSYPSPVGPFHSMDRGMGPSQPFDHQAAFSH-GMDPMVPPN 285
P+RP+ P S P + G + Q A H + +
Sbjct: 209 --------PYRPK-----PASTP--------VIFAGGQAYTIQGQYAIPHPDLTKLHQLA 247
Query: 286 SDRIPF-PYGSERPGHGPTFDRPPSPRSWTPQGVGGGDPRGFDASSGFTPRNRPVESGNH 344
+ PF P G P ++ P S Q + G G DAS P S +
Sbjct: 248 MQQTPFPPLGQTNPAF--PGEKLPLHSSEEAQNL-MGQSSGLDAS--------PPASTHE 296
Query: 345 AAILTSTTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATEGVVMVSGTS 404
I P + + G + ++ IRQ+SGA + + + G++E + ++GT
Sbjct: 297 LTI----------PNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQITITGTP 346
Query: 405 DQMRAAQSLIHAFILCGVT 423
+ AQ LI+A + VT
Sbjct: 347 ANISLAQYLINARLTSEVT 365
>gi|224116388|ref|XP_002317285.1| predicted protein [Populus trichocarpa]
gi|222860350|gb|EEE97897.1| predicted protein [Populus trichocarpa]
Length = 165
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 48/140 (34%), Positives = 74/140 (52%), Gaps = 7/140 (5%)
Query: 112 AQDAVMRVHSRIAEIGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFP 171
A +A++ + +I + E V RLLV S+ IGC++G+GG ++E+R+ T A +R+
Sbjct: 2 AVEAILLLQGKIND---EDDDTVGCRLLVLSKVIGCIIGKGGSTINEIRKRTNADVRI-S 57
Query: 172 KDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKRPGPNN---GHSYLPPF 228
K P C +DE+V+V+G SV+DAL I RLR+ + K G N+ S P
Sbjct: 58 KGAKPNCADSNDELVEVVGEVSSVRDALVQIVLRLRDDVLKEKDGGLNSLVGTDSVYPVG 117
Query: 229 PEMPPPPFRPRHNPASPGSY 248
+ P P P +P Y
Sbjct: 118 AGLSIPSILPSVPPVAPMGY 137
>gi|148699887|gb|EDL31834.1| poly(rC) binding protein 3, isoform CRA_c [Mus musculus]
Length = 373
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 94/379 (24%), Positives = 156/379 (41%), Gaps = 64/379 (16%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMRH 109
+ +LL H +VGS+IGK G V+ + E+GA I I++ + ERIV I+ ++ +
Sbjct: 49 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE--GNCPERIVTITGPTDAIFK- 105
Query: 110 SPAQDAVMRVHSRIAEIGFEPGQA---VVARLLVHSQQIGCLLGRGGHIVSEMRRATGAS 166
+ A A I + P + V RL+V + Q G L+G+GG + E+R +TGA
Sbjct: 106 AFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQ 165
Query: 167 IRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKRPGPNNGHSYLP 226
++V D P + V + G ++ + I + E+ P G +
Sbjct: 166 VQV-AGDMLPNS---TERAVTISGTPDAIIQCVKQICVVMLES--------PPKGATI-- 211
Query: 227 PFPEMPPPPFRPRHNPASPGSYPSPVGPFHSMDRGMGPSQPFDHQAAFSH-GMDPMVPPN 285
P+RP+ P S P + G + Q A H + +
Sbjct: 212 --------PYRPK-----PASTP--------VIFAGGQAYTIQGQYAIPHPDLTKLHQLA 250
Query: 286 SDRIPF-PYGSERPGHGPTFDRPPSPRSWTPQGVGGGDPRGFDASSGFTPRNRPVESGNH 344
+ PF P G P ++ P S Q + G G DAS P S +
Sbjct: 251 MQQTPFPPLGQTNPAF--PGEKLPLHSSEEAQNL-MGQSSGLDAS--------PPASTHE 299
Query: 345 AAILTSTTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATEGVVMVSGTS 404
I P + + G + ++ IRQ+SGA + + + G++E + ++GT
Sbjct: 300 LTI----------PNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQITITGTP 349
Query: 405 DQMRAAQSLIHAFILCGVT 423
+ AQ LI+A + VT
Sbjct: 350 ANISLAQYLINARLTSEVT 368
>gi|389585810|dbj|GAB68540.1| RNA-binding protein Nova-1, partial [Plasmodium cynomolgi strain B]
Length = 278
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 99/189 (52%), Gaps = 28/189 (14%)
Query: 31 SGPGHETVGGRNRMFYEEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIA---D 87
S G + G +++ + + +V L+ GS+IGK GSI+ + +N+TG S+K++
Sbjct: 4 SNQGEKNNKGTSQLCFVKMLVNNLV-----AGSVIGKNGSIITSIENKTGCSLKLSPTNS 58
Query: 88 ILPDSEERIVVISARENSEMRHSPAQDAVMRVHSRIAEI---GFEPGQAV------VARL 138
P+++ER++V+ ++ +A++ + +I +I F+ Q + R+
Sbjct: 59 YFPNTQERVLVLCGKQ------EQINNALLIILDKIRQITTQNFQDKQNINTAPKYTCRI 112
Query: 139 LVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDA 198
+V + ++G+GG + +++ +TGA I++ + R ++ I+ +IG + S+ D
Sbjct: 113 VVPKSAVSAIIGKGGQQIKQLQDSTGAKIQI-----SSREDGLNERIISIIGPFESISDT 167
Query: 199 LFHITSRLR 207
+T+ ++
Sbjct: 168 AIKVTNSIQ 176
>gi|386771590|ref|NP_001246875.1| mushroom-body expressed, isoform K [Drosophila melanogaster]
gi|383292065|gb|AFH04546.1| mushroom-body expressed, isoform K [Drosophila melanogaster]
Length = 573
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 92/386 (23%), Positives = 149/386 (38%), Gaps = 54/386 (13%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMR- 108
+ +L+ +VGS+IGK G IV F+ E+GA I I+D ERIV +S N+
Sbjct: 24 LTIRLIMQGKEVGSIIGKKGEIVNRFREESGAKINISD--GSCPERIVTVSGTTNAIFSA 81
Query: 109 HSPAQDAVMRVHSRIAEIGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIR 168
+ S+ ++G + RL+V + Q G L+G+ G + E+R+ TG SI+
Sbjct: 82 FTLITKKFEEWCSQFNDVGKVGKTQIPIRLIVPASQCGSLIGKSGSKIKEIRQTTGCSIQ 141
Query: 169 VFPK------DQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKRPGPNNGH 222
V + ++A ++I Q I Q L + S R P RP P
Sbjct: 142 VASEMLPNSTERAVTLSGSAEQITQCI-----YQICLVMLESPPRGATIPY-RPKP---- 191
Query: 223 SYLPPFPEMPPPPFRPRHNPASPGSYPSPVGPFHSMDRGMGPSQPFDHQAAFSHGMDPMV 282
P F + N A P PV P G+ A S DP++
Sbjct: 192 QVTGPVILANGQAFTIQGNYAVPTQETCPVFPLALATGGL--------HAGISGLADPLL 243
Query: 283 PPNSDRIPFPYGSERPGHGPTFDRPP-------SPRSWTPQGVGGGDPRGFDASSGFTPR 335
+ P P + P P GG + P
Sbjct: 244 KGAHLQGAIPAHHHHLQQMPDVAKNPLASLAALGLAGMNPASTGGINHTA-------NPA 296
Query: 336 NRPVESGNHAAILTSTTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKP---G 392
NR + + E+ + + + G+ + ++ IRQISGA + +++ + G
Sbjct: 297 NRAQQQQH----------EMTVSNDLIGCIIGKGGTKIAEIRQISGAMIRISNCEEREGG 346
Query: 393 ATEGVVMVSGTSDQMRAAQSLIHAFI 418
T+ + +SG D + AQ LI+ +
Sbjct: 347 NTDRTITISGNPDSVALAQYLINMSV 372
Score = 43.5 bits (101), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Query: 47 EEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIA-DILPDSEERIVVIS 100
+ ++ +L+ + GSLIGK GS ++ + TG SI++A ++LP+S ER V +S
Sbjct: 104 KTQIPIRLIVPASQCGSLIGKSGSKIKEIRQTTGCSIQVASEMLPNSTERAVTLS 158
Score = 40.8 bits (94), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 40/80 (50%), Gaps = 7/80 (8%)
Query: 129 EPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAPRCGSPHDEIVQV 188
+P + RL++ +++G ++G+ G IV+ R +GA I + GS + IV V
Sbjct: 19 DPSVTLTIRLIMQGKEVGSIIGKKGEIVNRFREESGAKINISD-------GSCPERIVTV 71
Query: 189 IGNYHSVQDALFHITSRLRE 208
G +++ A IT + E
Sbjct: 72 SGTTNAIFSAFTLITKKFEE 91
>gi|348517286|ref|XP_003446165.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K-like
[Oreochromis niloticus]
Length = 435
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 100/419 (23%), Positives = 165/419 (39%), Gaps = 84/419 (20%)
Query: 47 EEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSE--ERIVVISAREN 104
+E V ++L G++IGKGG ++ + + AS+ + PDS ERI+ ISA
Sbjct: 40 DEMVELRILLQSKNAGAVIGKGGKNIKALRTDYKASVSV----PDSSGPERILSISADIE 95
Query: 105 SEMRHSPAQDAVMRVHSRIAEIGFEPGQAVVA--RLLVHSQQIGCLLGRGGHIVSEMRRA 162
+ + ++++ + E G RLL+H G ++G G + E+R
Sbjct: 96 T------VGEILLKIIPTLEEYQQYNGMDFDCELRLLIHQSLAGSIIGVKGAKIKELREN 149
Query: 163 TGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMK-RPGPNNG 221
T SI++F + C D +V V G V + + + + E P+K R P +
Sbjct: 150 TKTSIKLFQE----CCPQSTDRVVLVGGKTERVVECIKTMLELISEA--PIKGRTQPYDP 203
Query: 222 HSYLPPFP-------------------EMPPPPFRPRHNPASPGSYPSPVGPFHSMDRGM 262
+ Y + P R H S PS G G
Sbjct: 204 NFYDETYEYGGFTMMFEERGGGRRPMGGFPMRGSRSSHGERSFDRMPSSRG-------GR 256
Query: 263 GPSQP----FDHQAAF---------------SHGMD-PMVPPN--SDRIPFPYGSERPGH 300
GP P +D + S G + PM P+ DR Y S R
Sbjct: 257 GPMPPSRRDYDEMSPRRGPPPPHPSRVGRGSSRGRNMPMGHPHRGDDRY---YDSYRGSD 313
Query: 301 GPTFDRPPSPRSWTPQGVGGGDPRGFDASSGFTPRNRPVESGNHAAILTS----TTIEVV 356
+ DR P ++ GGG +D SS + +SG + T +V
Sbjct: 314 ERSNDRRGRPDRYSDSMSGGG----YDNSSSWDS----YQSGGRGSYNDMGGPVITTQVT 365
Query: 357 IPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATEGVVMVSGTSDQMRAAQSLIH 415
IP+ + G+ + IR SGA++ +++P G+ + ++ +SGT DQ++ AQ L+
Sbjct: 366 IPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITISGTQDQIQNAQYLLQ 424
>gi|348502908|ref|XP_003439009.1| PREDICTED: poly(rC)-binding protein 2-like [Oreochromis niloticus]
Length = 324
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 89/373 (23%), Positives = 147/373 (39%), Gaps = 80/373 (21%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENS---- 105
+ +LL H +VGS+IGK G V+ + E+GA I I++ + ERI+ ++ S
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISE--GNCPERIITLAGPTTSIFKA 71
Query: 106 -EMRHSPAQDAVMRVHSRIAEIGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATG 164
M ++ + + P V RL+V + Q G L+G+GG + E+R + G
Sbjct: 72 FSMIIEKLEEDISTSMTNSTATSKPP---VTMRLVVPASQCGSLIGKGGCKIKEIRESAG 128
Query: 165 ASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKRPGPNNGHSY 224
A ++V D P + + + V G S+ + + I + E+ P G +
Sbjct: 129 AQVQV-AGDMLP---NSTERAITVAGTPQSIIECVKQICIVMLES--------PPKGVTI 176
Query: 225 -LPPFPEMPPPPFRPRHNPASPGSYPSPVGPFHSMDRGMGPSQPFDHQAAFSHGMDPMVP 283
P P P F A G + P D GPS HQ A
Sbjct: 177 PYRPKPSGSPVIFAGGQAYAVQGQHAIP-----QPDVSEGPSLTKLHQLAMQQS------ 225
Query: 284 PNSDRIPFPYGSERPGHGPTFDRPPSPRSWTPQGVGGGDPRGFDASSGFTPRNRPVESGN 343
PFP G G DAS+ ++G+
Sbjct: 226 ------PFPIAHSNQGF----------------------QAGMDASA---------QTGS 248
Query: 344 HAAILTSTTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATEGVVMVSGT 403
H E+ IP + + G + ++ IRQ+SGA + + +P G+T+ V ++G+
Sbjct: 249 H---------ELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTITGS 299
Query: 404 SDQMRAAQSLIHA 416
+ A+ LI+A
Sbjct: 300 HASISLAEYLINA 312
Score = 39.3 bits (90), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 46/85 (54%), Gaps = 10/85 (11%)
Query: 127 GFEPGQAVVAR-----LLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAPRCGSP 181
GF+ G A+ L + + IGC++GR G ++E+R+ +GA I++ P GS
Sbjct: 235 GFQAGMDASAQTGSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKI----ANPVEGST 290
Query: 182 HDEIVQVIGNYHSVQDALFHITSRL 206
D V + G++ S+ A + I +RL
Sbjct: 291 -DRQVTITGSHASISLAEYLINARL 314
>gi|386771593|ref|NP_730700.2| mushroom-body expressed, isoform G [Drosophila melanogaster]
gi|442634089|ref|NP_001262197.1| mushroom-body expressed, isoform M [Drosophila melanogaster]
gi|383292066|gb|AAN12194.2| mushroom-body expressed, isoform G [Drosophila melanogaster]
gi|440216174|gb|AGB94890.1| mushroom-body expressed, isoform M [Drosophila melanogaster]
Length = 359
Score = 71.2 bits (173), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 85/372 (22%), Positives = 148/372 (39%), Gaps = 65/372 (17%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMRH 109
+ +L+ +VGS+IGK G IV F+ E+GA I I+D ERIV +S N+
Sbjct: 24 LTIRLIMQGKEVGSIIGKKGEIVNRFREESGAKINISD--GSCPERIVTVSGTTNAIF-- 79
Query: 110 SPAQDAVMRVHSRIAEIGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRV 169
A + + ++G + RL+V + Q G L+G+ G + E+R+ TG SI+V
Sbjct: 80 -SAFTLITKKFEEFNDVGKVGKTQIPIRLIVPASQCGSLIGKSGSKIKEIRQTTGCSIQV 138
Query: 170 FPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKRPGPNNGHSYLPPFP 229
+ P + + V + G+ + ++ I + E+ P G +
Sbjct: 139 -ASEMLP---NSTERAVTLSGSAEQITQCIYQICLVMLES--------PPRGATI----- 181
Query: 230 EMPPPPFRPRHNPASPGSYPSPVGPFHSMDRGMGPSQPFDHQAAFSHGMDPMVPPNSDRI 289
P+RP+ P GP + Q F Q ++ +
Sbjct: 182 -----PYRPK---------PQVTGPVI-----LANGQAFTIQGNYA-------------V 209
Query: 290 PFPYGSERPGHGPTFDRPPSPRSWTPQGVGGGDPRGFDASSGFTPRNRPVESGNHAAILT 349
P ++ P P GG + A +G R + N A
Sbjct: 210 PTQEVAKNP---LASLAALGLAGMNPASTGGINHTALAALAGSQLR-----TANPANRAQ 261
Query: 350 STTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKP---GATEGVVMVSGTSDQ 406
E+ + + + G+ + ++ IRQISGA + +++ + G T+ + +SG D
Sbjct: 262 QQQHEMTVSNDLIGCIIGKGGTKIAEIRQISGAMIRISNCEEREGGNTDRTITISGNPDS 321
Query: 407 MRAAQSLIHAFI 418
+ AQ LI+ I
Sbjct: 322 VALAQYLINMRI 333
Score = 44.7 bits (104), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 51/99 (51%), Gaps = 8/99 (8%)
Query: 137 RLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQ 196
+ V + IGC++G+GG ++E+R+ +GA IR+ ++ R G D + + GN SV
Sbjct: 266 EMTVSNDLIGCIIGKGGTKIAEIRQISGAMIRISNCEE--REGGNTDRTITISGNPDSVA 323
Query: 197 DALFHITSRLRETIFPMKRPG-PNNGHSYLPPFPEMPPP 234
A + I R+ M+ G P G+ Y+ P + P
Sbjct: 324 LAQYLINMRI-----SMETAGLPIPGYHYIAPSAIVKTP 357
Score = 42.4 bits (98), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Query: 47 EEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIA-DILPDSEERIVVIS 100
+ ++ +L+ + GSLIGK GS ++ + TG SI++A ++LP+S ER V +S
Sbjct: 100 KTQIPIRLIVPASQCGSLIGKSGSKIKEIRQTTGCSIQVASEMLPNSTERAVTLS 154
Score = 40.8 bits (94), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 40/80 (50%), Gaps = 7/80 (8%)
Query: 129 EPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAPRCGSPHDEIVQV 188
+P + RL++ +++G ++G+ G IV+ R +GA I + GS + IV V
Sbjct: 19 DPSVTLTIRLIMQGKEVGSIIGKKGEIVNRFREESGAKINISD-------GSCPERIVTV 71
Query: 189 IGNYHSVQDALFHITSRLRE 208
G +++ A IT + E
Sbjct: 72 SGTTNAIFSAFTLITKKFEE 91
>gi|255559157|ref|XP_002520600.1| conserved hypothetical protein [Ricinus communis]
gi|223540199|gb|EEF41773.1| conserved hypothetical protein [Ricinus communis]
Length = 161
Score = 71.2 bits (173), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 51/133 (38%), Positives = 71/133 (53%), Gaps = 13/133 (9%)
Query: 51 VFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMRHS 110
V++L+ + KVGS+IG+ G +++ ET A I+I D P +RIV+IS +E E S
Sbjct: 28 VYRLIVPVAKVGSIIGRKGELIKQMCIETRARIRILDGPPSISDRIVLISGKEEPEAALS 87
Query: 111 PAQDAVMRVHSRI----AEIGFEPGQAVV------ARLLVHSQQIGCLLGRGGHIVS--- 157
PA DAV+RV R+ A G G AV RLLV S Q L+G+ G +
Sbjct: 88 PAIDAVLRVFKRVSGPSAGEGDATGSAVAGAAFSSVRLLVASSQAINLIGKQGSTIKSIL 147
Query: 158 EMRRATGASIRVF 170
E RR +S +F
Sbjct: 148 ESRRCASSSCYIF 160
>gi|361066699|gb|AEW07661.1| Pinus taeda anonymous locus 0_8463_01 genomic sequence
Length = 139
Score = 71.2 bits (173), Expect = 9e-10, Method: Composition-based stats.
Identities = 42/105 (40%), Positives = 65/105 (61%), Gaps = 10/105 (9%)
Query: 111 PAQDAVMRVHSRIAE---------IGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRR 161
PAQDA++RVHS IA+ + GQ ARLLV + QIG L+G+GG+ + +MR
Sbjct: 18 PAQDALLRVHSVIAQESSAKDKDSDADKKGQQN-ARLLVANSQIGSLIGKGGNNIQKMRT 76
Query: 162 ATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRL 206
+GA I++ KD+ P C DE+V + G+ +V+ AL+ +++ L
Sbjct: 77 ESGAQIQIPRKDELPGCAFSFDELVVISGDATAVKKALYAVSAFL 121
>gi|357481253|ref|XP_003610912.1| Far upstream element-binding protein [Medicago truncatula]
gi|355512247|gb|AES93870.1| Far upstream element-binding protein [Medicago truncatula]
Length = 807
Score = 71.2 bits (173), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 95/204 (46%), Gaps = 17/204 (8%)
Query: 35 HETVGGRNR-MFYEEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKI---ADILP 90
H+T G+ + + + K+ +KVG LIGK G +R Q +GA I+I AD P
Sbjct: 169 HDTSSGQKQPISGSDTTTRKIEVPSNKVGVLIGKSGDTIRYLQYNSGAKIQITRDADADP 228
Query: 91 DSEERIVVISARENSEMRHSPAQDAVMRVHSR-----IAEIGFEPGQAVVA----RLLVH 141
S R V + S + +AV+ + G P QA+V ++ V
Sbjct: 229 HSSTRPVELIGTLESIDKAEKLMNAVIAEADAGGSPALVARGLSPAQAIVGSDQIQIQVP 288
Query: 142 SQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFH 201
++++G ++G+GG + ++ TGA I++ P+ P + VQV G+ ++ A
Sbjct: 289 NEKVGLIIGKGGETIKSLQTKTGARIQLIPQ-HLPEGDDSKERTVQVTGDKRQIEIAQEM 347
Query: 202 ITSRLRETIFPMKRPGPNNGHSYL 225
I L + I+P+ P P H +L
Sbjct: 348 IKEVLSQ-IWPL--PFPWGQHCFL 368
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 52/96 (54%), Gaps = 9/96 (9%)
Query: 59 DKVGSLIGKGGSIVRTFQNETGASIK-IADILP---DSEERIVVISA-RENSEMRHSPAQ 113
+KVG +IGKGG +++ Q +TGA I+ I LP DS+ER V ++ + E+ AQ
Sbjct: 290 EKVGLIIGKGGETIKSLQTKTGARIQLIPQHLPEGDDSKERTVQVTGDKRQIEI----AQ 345
Query: 114 DAVMRVHSRIAEIGFEPGQAVVARLLVHSQQIGCLL 149
+ + V S+I + F GQ + + GCL+
Sbjct: 346 EMIKEVLSQIWPLPFPWGQHCFLDVALKPPIAGCLM 381
>gi|359495228|ref|XP_002277528.2| PREDICTED: uncharacterized protein LOC100253453 [Vitis vinifera]
Length = 772
Score = 71.2 bits (173), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 66/252 (26%), Positives = 109/252 (43%), Gaps = 20/252 (7%)
Query: 53 KLLCHLDKVGSLIGKGGSIVRTFQNETGASIKI---ADILPDSEER-IVVISARENSEMR 108
K+ +KVG LIGK G +R Q +GA I+I AD P S R + +I + EN
Sbjct: 179 KMEVPNNKVGVLIGKAGDTIRFLQYNSGAKIQITRDADADPYSASRPVELIGSLENINKA 238
Query: 109 HSPAQDAVMRVHS----RIAEIGFEPGQAVVA----RLLVHSQQIGCLLGRGGHIVSEMR 160
+D + + + GF QAV A ++ V ++++G ++G+GG + ++
Sbjct: 239 EKLIKDVIAEADAGGSPSLVARGFATAQAVGAAEQVQIQVPNEKVGLIIGKGGETIKSLQ 298
Query: 161 RATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKRPGPNN 220
+GA I++ P+ P + V+V G+ ++ A I + + + PG N
Sbjct: 299 TRSGARIQLIPQ-HLPEGDQSKERTVRVTGDKKQIEMAREMIKEVMNQPVRSSTYPGSYN 357
Query: 221 GHSYLPPFPEMP-------PPPFRPRHNPASPGSYPSPVGPFHSMDRGMGPSQPFDHQAA 273
Y P P P P P +P G+YPS + G P Q +++
Sbjct: 358 QQGYRPRGPTGPSQWGPRGPHPGQPTGYDYQRGAYPSQNQQYAPPSYGGYPPQQMAPRSS 417
Query: 274 FSHGMDPMVPPN 285
F G + P N
Sbjct: 418 FGSGWEQRPPAN 429
>gi|386771588|ref|NP_001246874.1| mushroom-body expressed, isoform I [Drosophila melanogaster]
gi|383292064|gb|AFH04545.1| mushroom-body expressed, isoform I [Drosophila melanogaster]
Length = 539
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 81/372 (21%), Positives = 147/372 (39%), Gaps = 60/372 (16%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMRH 109
+ +L+ +VGS+IGK G IV F+ E+GA I I+D ERIV +S N+
Sbjct: 24 LTIRLIMQGKEVGSIIGKKGEIVNRFREESGAKINISD--GSCPERIVTVSGTTNAIF-- 79
Query: 110 SPAQDAVMRVHSRIAEIGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRV 169
A + + ++G + RL+V + Q G L+G+ G + E+R+ TG SI+V
Sbjct: 80 -SAFTLITKKFEEFNDVGKVGKTQIPIRLIVPASQCGSLIGKSGSKIKEIRQTTGCSIQV 138
Query: 170 FPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKRPGPNNGHSYLPPFP 229
+ P + + V + G+ + ++ I + ++ P P
Sbjct: 139 -ASEMLP---NSTERAVTLSGSAEQITQCIYQI------CLVMLESP------------P 176
Query: 230 EMPPPPFRPRHNPASPGSYPSPVGPFHSMDRGMGPSQPFDHQAAFSHGMDPMVPPNSDRI 289
P+RP+ P GP + Q F Q ++ +
Sbjct: 177 RGATIPYRPK---------PQVTGPVI-----LANGQAFTIQGNYA-------------V 209
Query: 290 PFPYGSERPGHGPTFDRPPSPRSWTPQGVGGGDPRGFDASSGFTPRNRPVESGNHAAILT 349
P ++ P P GG + G ++ + + N A
Sbjct: 210 PTQEVAKNP---LASLAALGLAGMNPASTGGINHTGSAPAALAALAGSQLRTANPANRAQ 266
Query: 350 STTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKP---GATEGVVMVSGTSDQ 406
E+ + + + G+ + ++ IRQISGA + +++ + G T+ + +SG D
Sbjct: 267 QQQHEMTVSNDLIGCIIGKGGTKIAEIRQISGAMIRISNCEEREGGNTDRTITISGNPDS 326
Query: 407 MRAAQSLIHAFI 418
+ AQ LI+ +
Sbjct: 327 VALAQYLINMSV 338
Score = 43.1 bits (100), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Query: 47 EEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIA-DILPDSEERIVVIS 100
+ ++ +L+ + GSLIGK GS ++ + TG SI++A ++LP+S ER V +S
Sbjct: 100 KTQIPIRLIVPASQCGSLIGKSGSKIKEIRQTTGCSIQVASEMLPNSTERAVTLS 154
Score = 41.2 bits (95), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 40/80 (50%), Gaps = 7/80 (8%)
Query: 129 EPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAPRCGSPHDEIVQV 188
+P + RL++ +++G ++G+ G IV+ R +GA I + GS + IV V
Sbjct: 19 DPSVTLTIRLIMQGKEVGSIIGKKGEIVNRFREESGAKINISD-------GSCPERIVTV 71
Query: 189 IGNYHSVQDALFHITSRLRE 208
G +++ A IT + E
Sbjct: 72 SGTTNAIFSAFTLITKKFEE 91
>gi|341894976|gb|EGT50911.1| hypothetical protein CAEBREN_13773 [Caenorhabditis brenneri]
Length = 397
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 92/368 (25%), Positives = 149/368 (40%), Gaps = 39/368 (10%)
Query: 53 KLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMRHSPA 112
+LL G++IGKGG ++ + E A +++ D ++ ER+ ++A E + + +
Sbjct: 53 RLLVSSKSAGAIIGKGGENIKRLRAEFNAHVQVPD--SNTPERVCTVTADEKTVL--NIL 108
Query: 113 QDAVMRVHSRIAEIGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPK 172
+D + R+ +E +P + R+L+H G L+GR G + E+R A +++F
Sbjct: 109 KDVLPRLEDNFSE--RDPCEV---RMLIHQSHAGALIGRNGSKIKELREKCSARLKIF-T 162
Query: 173 DQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKRPGPNNGHSYLPPFPEMP 232
AP D ++ G +V + + L+E P+K + YLP F P
Sbjct: 163 GCAP---GSTDRVLITSGEQKNVLAIIEEVMRELKE--IPIK----GSATPYLPSFHYDP 213
Query: 233 PPPFRPRHNPA--SPGSYPSPVGPFHSMDRGMGPSQPFDHQAAFSHGMDPMVPPNSDRIP 290
P S G P+ GP P P + A + G P D
Sbjct: 214 SNISEYGGFPGTMSSGGPPNSRGPSQQRGGQGPPGGPRSYGGAVTPGGGPRSFEAGDFQQ 273
Query: 291 FPYGSERPGHGPTFDRPPSPRSWTPQGVGGGDPRGFDASSGFTPRNRPVESGNHAAILTS 350
F G P G + P P QG GG P P N G
Sbjct: 274 FRGG---PVQGYAMNAPGYP---PQQGQFGGAP----------PANTGYGYGPGGGGPV- 316
Query: 351 TTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATEGVVMVSGTSDQMRAA 410
TT +V IP + G ++ IRQ SGA + + +P G E ++ + GT Q+ +A
Sbjct: 317 TTAQVTIPSDLGGTIIGRGGERIARIRQDSGAQITL-EPSNGQPERIITIKGTEQQIHSA 375
Query: 411 QSLIHAFI 418
Q L+ +
Sbjct: 376 QYLLQQCV 383
>gi|225429818|ref|XP_002280789.1| PREDICTED: poly(rC)-binding protein 3-like [Vitis vinifera]
Length = 420
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 86/380 (22%), Positives = 148/380 (38%), Gaps = 72/380 (18%)
Query: 52 FKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMRHSP 111
F+L+ VGS+IG+ G I++ TGA I + + + + IV+ISA+E +R SP
Sbjct: 29 FRLIVPGSAVGSIIGREGKIIKRISEGTGARIHVISLPAGTTDCIVLISAKEQPHLRLSP 88
Query: 112 AQDAVMRVHSRIAEIGFEPGQAVVAR----------LLVHSQQIGCLLGRGGHIVSEMRR 161
A +AV+ V R+ + G + ++ LV Q ++G+ G V +
Sbjct: 89 AMEAVIEVFKRVTGLYPIDGNGMCSKASEVKLSSVTFLVGYSQALSIIGKEGSRVRAIEE 148
Query: 162 ATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKRPGPNNG 221
++G ++ + + P SP + I+++ G V A+ + LR +
Sbjct: 149 SSGTTVGILSR--VPFYVSPDERIIKIQGQVLKVMAAMEAVLYHLRLYLV---------D 197
Query: 222 HSYLPPFPEMPPPPFRPRHNPASPGSYPSPVGPFHSMDRGMGPSQPFDHQAAFSHGMDPM 281
S +P F E G SQ Q+ H P
Sbjct: 198 SSVIPAFSEKCK----------------------------TGISQA--DQSLSLHHSTPA 227
Query: 282 VPPNSDRIPFPYGSERPGHGPTFD-RPPSPRS--WTPQGVGGGDPRGFDASSGFTPRNRP 338
P +D + Y GH + + PS S + + V GG P
Sbjct: 228 HQPGADSM---YSLPLLGHEAKVEAKIPSSYSSLYAQEPVLGGLP--------------- 269
Query: 339 VESGNHAAILTSTTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATEGVV 398
+ + AA T + IP + G + HIR+ SG+ + + + + E ++
Sbjct: 270 LRRSDRAAAPAQRTERIKIPFSAAKDIIGIAGETIDHIRRTSGSIITIEEDRSLPDEYIL 329
Query: 399 MVSGTSDQMRAAQSLIHAFI 418
V GT+ Q++ AQ LI +
Sbjct: 330 EVRGTTSQLQTAQQLIEELL 349
>gi|348554794|ref|XP_003463210.1| PREDICTED: poly(rC)-binding protein 3-like [Cavia porcellus]
Length = 384
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 94/380 (24%), Positives = 157/380 (41%), Gaps = 65/380 (17%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMRH 109
+ +LL H +VGS+IGK G V+ + E+GA I I++ + ERIV I+ ++ +
Sbjct: 59 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE--GNCPERIVTITGPTDAIFK- 115
Query: 110 SPAQDAVMRVHSRIAEIGFEPGQA---VVARLLVHSQQIGCLLGRGGHIVSEMRRATGAS 166
+ A A I + P + V RL+V + Q G L+G+GG + E+R +TGA
Sbjct: 116 AFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQ 175
Query: 167 IRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKRPGPNNGHSYLP 226
++V D P + + V + G ++ + I + E+ P G +
Sbjct: 176 VQV-AGDMLP---NSTERAVTISGTPDAIIQCVKQICVVMLES--------PPKGATI-- 221
Query: 227 PFPEMPPPPFRPRHNPASPGSYPSPVGPFHSMDRGMGPSQPFDHQAAFSH--GMDPMVPP 284
P+RP+ P S P + G + Q A H + +
Sbjct: 222 --------PYRPK-----PASTP--------VIFAGGQAYTIQGQYAIPHPDQLTKLHQL 260
Query: 285 NSDRIPF-PYGSERPGHGPTFDRPPSPRSWTPQGVGGGDPRGFDASSGFTPRNRPVESGN 343
+ PF P G P ++ P S Q + G G DAS P S +
Sbjct: 261 AMQQTPFPPLGQTNPAF--PGEKLPLHSSEEAQNL-MGQSSGLDAS--------PPASTH 309
Query: 344 HAAILTSTTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATEGVVMVSGT 403
I P + + G + ++ IRQ+SGA + + + G++E + ++GT
Sbjct: 310 ELTI----------PNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQITITGT 359
Query: 404 SDQMRAAQSLIHAFILCGVT 423
+ AQ LI+A + VT
Sbjct: 360 PANISLAQYLINARLTSEVT 379
>gi|1360003|emb|CAA66619.1| nuclear poly(C)-binding protein, splicevariant E [Mus musculus]
Length = 349
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 91/378 (24%), Positives = 160/378 (42%), Gaps = 67/378 (17%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMRH 109
+ +LL H +VGS+IGK G V+ + E+GA I I++ + ERI+ ++ N+ +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISE--GNCPERIITLAGPTNAIFKA 71
Query: 110 SPAQDAVMRVHSRIAEIGFEPGQA----VVARLLVHSQQIGCLLGRGGHIVSEMRRATGA 165
+ ++ I+ A V RL+V + Q G L+G+GG + E+R +TGA
Sbjct: 72 FAM--IIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGA 129
Query: 166 SIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKRPGPNNGHSYL 225
++V D P + + + + G S+ + + I + E+ P G +
Sbjct: 130 QVQV-AGDMLP---NSTERAITIAGIPQSIIECVKQICVVMLES--------PPKGVTI- 176
Query: 226 PPFPEMPPPPFRPRHNPASPGSYPSPVGPFHSMDRGMGPSQPFDHQAAFSHGMDPMVPPN 285
P+RP+ P+S SPV DR +S G
Sbjct: 177 ---------PYRPK--PSS-----SPVIFAGGQDR-------------YSTG-------- 199
Query: 286 SDRIPFPYGSERPGHGPTFDRPPSPRSWTPQGVGGGDPRGFDASSGFTPRNR--PVESGN 343
SD FP+ + P + PP ++T QG + P+ GN
Sbjct: 200 SDSASFPHTTPSMSLNPDLEGPP-LEAYTIQGQYAIPQPDLTKLHQLAMQQSHFPMTHGN 258
Query: 344 HA------AILTSTTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATEGV 397
A +T+ E+ IP + + + ++ IRQ+SGA + + +P G+T+
Sbjct: 259 TGFSAGLDASAQTTSHELTIPNDLIGCIIRRQGAKINEIRQMSGAQIKIANPVEGSTDRQ 318
Query: 398 VMVSGTSDQMRAAQSLIH 415
V ++G++ + AQ LI+
Sbjct: 319 VTITGSAASISLAQYLIN 336
>gi|193083114|ref|NP_001122386.1| poly(rC)-binding protein 2 isoform g [Homo sapiens]
gi|73996231|ref|XP_857798.1| PREDICTED: poly(rC)-binding protein 2 isoform 15 [Canis lupus
familiaris]
gi|291389261|ref|XP_002711067.1| PREDICTED: poly(rC) binding protein 2-like isoform 4 [Oryctolagus
cuniculus]
gi|338726296|ref|XP_003365293.1| PREDICTED: poly(rC)-binding protein 2 [Equus caballus]
gi|426224374|ref|XP_004006346.1| PREDICTED: poly(rC)-binding protein 2 isoform 4 [Ovis aries]
gi|119617117|gb|EAW96711.1| poly(rC) binding protein 2, isoform CRA_f [Homo sapiens]
Length = 318
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 87/371 (23%), Positives = 146/371 (39%), Gaps = 84/371 (22%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMRH 109
+ +LL H +VGS+IGK G V+ + E+GA I I++ + ERI+ ++ N+ +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISE--GNCPERIITLAGPTNAIFKA 71
Query: 110 SPAQDAVMRVHSRIAEIGFEPGQA----VVARLLVHSQQIGCLLGRGGHIVSEMRRATGA 165
+ ++ I+ A V RL+V + Q G L+G+GG + E+R +TGA
Sbjct: 72 FAM--IIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGA 129
Query: 166 SIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKRPGPNNGHSY- 224
++V D P + + + + G S+ + + I + E+ P G +
Sbjct: 130 QVQV-AGDMLP---NSTERAITIAGIPQSIIECVKQICVVMLES--------PPKGVTIP 177
Query: 225 LPPFPEMPPPPFRPRHNPASPGSYPSPVGPFHSMDRGMGPSQPFDHQAAFSHGMDPMVPP 284
P P P F G Y P P HQ A PM
Sbjct: 178 YRPKPSSSPVIFAGGQAYTIQGQYAIP-----------QPDLTKLHQLAMQQSHFPMT-- 224
Query: 285 NSDRIPFPYGSERPGHGPTFDRPPSPRSWTPQGVGGGDPRGFDASSGFTPRNRPVESGNH 344
HG T G G DAS+
Sbjct: 225 ---------------HGNT-----------------GFSAGLDASA-------------- 238
Query: 345 AAILTSTTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATEGVVMVSGTS 404
+T+ E+ IP + + G + ++ IRQ+SGA + + +P G+T+ V ++G++
Sbjct: 239 ----QTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTITGSA 294
Query: 405 DQMRAAQSLIH 415
+ AQ LI+
Sbjct: 295 ASISLAQYLIN 305
>gi|149031922|gb|EDL86834.1| rCG50739, isoform CRA_c [Rattus norvegicus]
Length = 317
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 87/370 (23%), Positives = 150/370 (40%), Gaps = 83/370 (22%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMRH 109
+ +LL H +VGS+IGK G V+ + E+GA I I++ + ERI+ ++ N+ +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISE--GNCPERIITLAGPTNAIFKA 71
Query: 110 SPAQDAVMRVHSRIAEIGFEPGQA----VVARLLVHSQQIGCLLGRGGHIVSEMRRATGA 165
+ ++ I+ A V RL+V + Q G L+G+GG + E+R +TGA
Sbjct: 72 FAM--IIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGA 129
Query: 166 SIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKRPGPNNGHSYL 225
++V D P + + + + G S+ + + I + E+ P G +
Sbjct: 130 QVQV-AGDMLP---NSTERAITIAGIPQSIIECVKQICVVMLES--------PPKGVTI- 176
Query: 226 PPFPEMPPPPFRPRHNPASPGSYPSPVGPFHSMDRGMGPSQPFDHQAAFSHGMDPMVPPN 285
P+RP+ P S P G HQ A PM
Sbjct: 177 ---------PYRPK-----PSSSPVIFA---------GGQLTKLHQLAMQQSHFPMT--- 210
Query: 286 SDRIPFPYGSERPGHGPTFDRPPSPRSWTPQGVGGGDPRGFDASSGFTPRNRPVESGNHA 345
HG T GF +P + +G A
Sbjct: 211 --------------HGNT---------------------GFSGIESSSPEVKGYWAGLDA 235
Query: 346 AILTSTTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATEGVVMVSGTSD 405
+ T T+ E+ IP + + G + ++ IRQ+SGA + + +P G+T+ V ++G++
Sbjct: 236 SAQT-TSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTITGSAA 294
Query: 406 QMRAAQSLIH 415
+ AQ LI+
Sbjct: 295 SISLAQYLIN 304
>gi|209156062|gb|ACI34263.1| PolyrC-binding protein 2 [Salmo salar]
Length = 318
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 91/383 (23%), Positives = 155/383 (40%), Gaps = 106/383 (27%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMRH 109
+ +LL H +VGS+IGK G V+ + E+GA I I++ + ERI+ ++
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISE--GNCPERIITLAG-------- 63
Query: 110 SPAQDAVMRVHSRIAEIGFEPGQA------------VVARLLVHSQQIGCLLGRGGHIVS 157
A+ + S I E E + V R++V + Q G L+G+GG +
Sbjct: 64 --PTTAIFKAFSMIIEKLEEDISSSMTNSTATSKPPVTLRIVVPASQCGSLIGKGGCKIK 121
Query: 158 EMRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKRPG 217
E+R +TGA ++V D P + + + + G S+ + + I + E+
Sbjct: 122 EIRESTGAQVQV-AGDMLP---NSTERAITIAGTPQSIIECVKQICVVMLES-------- 169
Query: 218 PNNGHSYLPPFPEMPPPPFRPRHNPASP----GSYPSPVGPFHSMDRGMGPSQPFDHQAA 273
P G + P+RP+ + SP G V H++ + P HQ A
Sbjct: 170 PPKGVTI----------PYRPKPS-GSPVIFAGGQAYAVQGQHAIPQ---PDLTKLHQLA 215
Query: 274 FSHGMDPMVPPNSDRIPFPYGSERPGHGPTFDRPPSPRSWTPQGVGGGDPRGFDASSGFT 333
PFP G PG QG G DAS+
Sbjct: 216 MQQS------------PFPMGPNNPGF---------------QG-------GMDASA--- 238
Query: 334 PRNRPVESGNHAAILTSTTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGA 393
++ +H E+ IP + + G S ++ IRQ+SGA + + +P G+
Sbjct: 239 ------QTSSH---------EMTIPNDLIGCIIGRQGSKINEIRQMSGAQIKIANPVEGS 283
Query: 394 TEGVVMVSGTSDQMRAAQSLIHA 416
+ V ++G++ + A+ LI+A
Sbjct: 284 ADRQVTITGSAASISLAEYLINA 306
>gi|334350025|ref|XP_003342306.1| PREDICTED: poly(rC)-binding protein 2-like [Monodelphis domestica]
gi|444513888|gb|ELV10473.1| Poly(rC)-binding protein 2 [Tupaia chinensis]
Length = 307
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 87/371 (23%), Positives = 146/371 (39%), Gaps = 84/371 (22%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMRH 109
+ +LL H +VGS+IGK G V+ + E+GA I I++ + ERI+ ++ N+ +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISE--GNCPERIITLAGPTNAIFKA 71
Query: 110 SPAQDAVMRVHSRIAEIGFEPGQA----VVARLLVHSQQIGCLLGRGGHIVSEMRRATGA 165
+ ++ I+ A V RL+V + Q G L+G+GG + E+R +TGA
Sbjct: 72 FAM--IIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGA 129
Query: 166 SIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKRPGPNNGHSY- 224
++V D P + + + + G S+ + + I + E+ P G +
Sbjct: 130 QVQV-AGDMLP---NSTERAITIAGIPQSIIECVKQICVVMLES--------PPKGVTIP 177
Query: 225 LPPFPEMPPPPFRPRHNPASPGSYPSPVGPFHSMDRGMGPSQPFDHQAAFSHGMDPMVPP 284
P P P F G Y P P HQ A PM
Sbjct: 178 YRPKPSSSPVIFAGGQAYTIQGQYAIP-----------QPDLTKLHQLAMQQSHFPMT-- 224
Query: 285 NSDRIPFPYGSERPGHGPTFDRPPSPRSWTPQGVGGGDPRGFDASSGFTPRNRPVESGNH 344
HG T G G DAS+
Sbjct: 225 ---------------HGNT-----------------GFSAGLDASA-------------- 238
Query: 345 AAILTSTTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATEGVVMVSGTS 404
+T+ E+ IP + + G + ++ IRQ+SGA + + +P G+T+ V ++G++
Sbjct: 239 ----QTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTITGSA 294
Query: 405 DQMRAAQSLIH 415
+ AQ LI+
Sbjct: 295 ASISLAQYLIN 305
>gi|383158165|gb|AFG61431.1| Pinus taeda anonymous locus 0_8463_01 genomic sequence
Length = 139
Score = 70.5 bits (171), Expect = 1e-09, Method: Composition-based stats.
Identities = 42/105 (40%), Positives = 65/105 (61%), Gaps = 10/105 (9%)
Query: 111 PAQDAVMRVHSRIAE---------IGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRR 161
PAQDA++RVHS IA+ + GQ ARLLV + QIG L+G+GG+ + +MR
Sbjct: 18 PAQDALLRVHSVIAQESSVKDKDNDADKKGQQN-ARLLVANSQIGSLIGKGGNNIQKMRT 76
Query: 162 ATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRL 206
+GA I++ KD+ P C DE+V + G+ +V+ AL+ +++ L
Sbjct: 77 ESGAQIQIPRKDELPGCAFSFDELVVISGDAKAVKKALYSVSAFL 121
>gi|195128219|ref|XP_002008562.1| GI13561 [Drosophila mojavensis]
gi|193920171|gb|EDW19038.1| GI13561 [Drosophila mojavensis]
Length = 362
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 86/373 (23%), Positives = 149/373 (39%), Gaps = 64/373 (17%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMR- 108
+ +L+ +VGS+IGK G IV F+ E+GA I I+D ERIV +S N+
Sbjct: 24 LTIRLIMQGKEVGSIIGKKGEIVNRFREESGAKINISD--GSCPERIVTVSGTTNAIFSA 81
Query: 109 HSPAQDAVMRVHSRIAEIGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIR 168
+ S+ ++G + RL+V + Q G L+G+ G + E+R+ TG SI+
Sbjct: 82 FTLITKKFEEWCSQFNDVGKVGKTQIPIRLIVPASQCGSLIGKSGSKIKEIRQTTGCSIQ 141
Query: 169 VFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKRPGPNNGHSYLPPF 228
V + P + + V + G+ + ++ I + E+ P G +
Sbjct: 142 V-ASEMLP---NSTERAVTLSGSAEQITQCIYQICLVMLES--------PPRGATI---- 185
Query: 229 PEMPPPPFRPRHNPASPGSYPSPVGPFHSMDRGMGPSQPFDHQAAFSHGMDPMVPPNSDR 288
P+RP+ P GP + Q F Q ++
Sbjct: 186 ------PYRPK---------PQVTGPVI-----LANGQAFTIQGNYA------------- 212
Query: 289 IPFPYGSERPGHGPTFDRPPSPRSWTPQGVGGGDPRGFDASSGFTPRNRPVESGNHAAIL 348
+P ++ P TP GG + A +G R + N A
Sbjct: 213 VPTQEVAKNP---LASLAALGLAGMTPASTGGINHTALAALAGSQLRT---ANANRAQ-- 264
Query: 349 TSTTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKP---GATEGVVMVSGTSD 405
E+ + + + G+ + ++ IRQISGA + +++ + G T+ + +SG D
Sbjct: 265 -QQQHEMTVSNDLIGCIIGKGGTKIAEIRQISGAMIRISNCEEREGGNTDRTITISGNPD 323
Query: 406 QMRAAQSLIHAFI 418
+ AQ LI+ I
Sbjct: 324 SVALAQYLINMRI 336
Score = 44.7 bits (104), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 51/99 (51%), Gaps = 8/99 (8%)
Query: 137 RLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQ 196
+ V + IGC++G+GG ++E+R+ +GA IR+ ++ R G D + + GN SV
Sbjct: 269 EMTVSNDLIGCIIGKGGTKIAEIRQISGAMIRISNCEE--REGGNTDRTITISGNPDSVA 326
Query: 197 DALFHITSRLRETIFPMKRPG-PNNGHSYLPPFPEMPPP 234
A + I R+ M+ G P G+ Y+ P + P
Sbjct: 327 LAQYLINMRI-----SMETAGLPIPGYHYIAPSAIVKTP 360
Score = 42.4 bits (98), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Query: 47 EEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIA-DILPDSEERIVVIS 100
+ ++ +L+ + GSLIGK GS ++ + TG SI++A ++LP+S ER V +S
Sbjct: 104 KTQIPIRLIVPASQCGSLIGKSGSKIKEIRQTTGCSIQVASEMLPNSTERAVTLS 158
Score = 40.8 bits (94), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 40/80 (50%), Gaps = 7/80 (8%)
Query: 129 EPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAPRCGSPHDEIVQV 188
+P + RL++ +++G ++G+ G IV+ R +GA I + GS + IV V
Sbjct: 19 DPSVTLTIRLIMQGKEVGSIIGKKGEIVNRFREESGAKINISD-------GSCPERIVTV 71
Query: 189 IGNYHSVQDALFHITSRLRE 208
G +++ A IT + E
Sbjct: 72 SGTTNAIFSAFTLITKKFEE 91
>gi|328720738|ref|XP_001949210.2| PREDICTED: poly(rC)-binding protein 3-like [Acyrthosiphon pisum]
Length = 436
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 87/384 (22%), Positives = 152/384 (39%), Gaps = 80/384 (20%)
Query: 45 FYEEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISAREN 104
+ + + ++L H +VG++IGKGG V+ ++++GA + I+D + ERIV I+ N
Sbjct: 16 YNDVNLTIRILFHGREVGNVIGKGGETVKNIRDQSGARVLISD--GSTPERIVTITGTTN 73
Query: 105 SEMRHSPAQDAVMRVHSRIAEIGFE--------PGQAVVARLLVHSQQIGCLLGRGGHIV 156
+ + A + ++ E FE P + +L+V + Q G ++G+GG +
Sbjct: 74 AICK------ATELIGLKVEEF-FERQNGDWNGPKAPLTFKLIVPASQCGFIIGKGGCKI 126
Query: 157 SEMRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKRP 216
E+R ++GA+I+V D P + + +V + G ++ ++ + + L
Sbjct: 127 KEIRESSGAAIQV-ASDMLP---NSTERLVSITGTTGTISQCVYQVCNVL---------- 172
Query: 217 GPNNGHSYLPPFPEMPPPPFRPRHNPASPGSYPSPVGPFHSMDRGMGPSQPFDHQAAFSH 276
L P P+ PR + G S VG D G + P AA
Sbjct: 173 --------LDSPPRSATIPYDPRSK--TSGFASSAVGN----DFGRQRTNPLASLAALGL 218
Query: 277 GMDPMVPPNSDRIPFPYGSERPGHGPTFDRPPSPRSWTPQGVGGGDPRGFDASSGFTPRN 336
G N + GS+ R+ Q RN
Sbjct: 219 GTASTGGINPAALAALAGSQL-------------RTGNRQN-----------------RN 248
Query: 337 RPVESGNHAAILTSTTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATEG 396
E N + + TI + +P + V G S ++ IRQISGA V + + G
Sbjct: 249 GSGEHKNQNSNSNTETISMTVPNDLIGCVIGRRGSKIAEIRQISGALVHIAKGEGTHENG 308
Query: 397 V-----VMVSGTSDQMRAAQSLIH 415
+ ++G D + A+ LI
Sbjct: 309 ENEDRHITITGNKDSISVAKYLIE 332
>gi|361066701|gb|AEW07662.1| Pinus taeda anonymous locus 0_8463_01 genomic sequence
gi|383158160|gb|AFG61426.1| Pinus taeda anonymous locus 0_8463_01 genomic sequence
gi|383158161|gb|AFG61427.1| Pinus taeda anonymous locus 0_8463_01 genomic sequence
gi|383158162|gb|AFG61428.1| Pinus taeda anonymous locus 0_8463_01 genomic sequence
gi|383158163|gb|AFG61429.1| Pinus taeda anonymous locus 0_8463_01 genomic sequence
gi|383158164|gb|AFG61430.1| Pinus taeda anonymous locus 0_8463_01 genomic sequence
gi|383158166|gb|AFG61432.1| Pinus taeda anonymous locus 0_8463_01 genomic sequence
gi|383158167|gb|AFG61433.1| Pinus taeda anonymous locus 0_8463_01 genomic sequence
gi|383158168|gb|AFG61434.1| Pinus taeda anonymous locus 0_8463_01 genomic sequence
gi|383158169|gb|AFG61435.1| Pinus taeda anonymous locus 0_8463_01 genomic sequence
gi|383158170|gb|AFG61436.1| Pinus taeda anonymous locus 0_8463_01 genomic sequence
gi|383158171|gb|AFG61437.1| Pinus taeda anonymous locus 0_8463_01 genomic sequence
gi|383158172|gb|AFG61438.1| Pinus taeda anonymous locus 0_8463_01 genomic sequence
gi|383158173|gb|AFG61439.1| Pinus taeda anonymous locus 0_8463_01 genomic sequence
gi|383158174|gb|AFG61440.1| Pinus taeda anonymous locus 0_8463_01 genomic sequence
gi|383158175|gb|AFG61441.1| Pinus taeda anonymous locus 0_8463_01 genomic sequence
gi|383158176|gb|AFG61442.1| Pinus taeda anonymous locus 0_8463_01 genomic sequence
gi|383158177|gb|AFG61443.1| Pinus taeda anonymous locus 0_8463_01 genomic sequence
Length = 139
Score = 70.5 bits (171), Expect = 2e-09, Method: Composition-based stats.
Identities = 42/105 (40%), Positives = 65/105 (61%), Gaps = 10/105 (9%)
Query: 111 PAQDAVMRVHSRIAE---------IGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRR 161
PAQDA++RVHS IA+ + GQ ARLLV + QIG L+G+GG+ + +MR
Sbjct: 18 PAQDALLRVHSVIAQESSVKDKDNDADKKGQQN-ARLLVANSQIGSLIGKGGNNIQKMRT 76
Query: 162 ATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRL 206
+GA I++ KD+ P C DE+V + G+ +V+ AL+ +++ L
Sbjct: 77 ESGAQIQIPRKDELPGCAFSFDELVVISGDAKAVKKALYSVSAFL 121
>gi|495128|emb|CAA53546.1| mCBP [Mus musculus]
Length = 331
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 87/371 (23%), Positives = 148/371 (39%), Gaps = 71/371 (19%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMRH 109
+ +LL H +VGS+IGK G V+ + E+GA I I++ + ERI+ ++ N+ +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISE--GNCPERIITLAGPTNAIFKA 71
Query: 110 SPAQDAVMRVHSRIAEIGFEPGQA----VVARLLVHSQQIGCLLGRGGHIVSEMRRATGA 165
+ ++ I+ A V RL+V + Q G L+G+GG + E+R +TGA
Sbjct: 72 FAM--IIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGA 129
Query: 166 SIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKRPGPNNGHSY- 224
++V D P + + + + G S+ + + I + E+ P G +
Sbjct: 130 QVQV-AGDMLP---NSTERAITIAGIPQSIIECVKQICVVMLES--------PPKGVTIP 177
Query: 225 LPPFPEMPPPPFRPRHNPASPGSYPSPVGPFHSMDRGMGPSQPFDHQAAFSHGMDPMVPP 284
P P P F G Y P P HQ A PM
Sbjct: 178 YRPKPSSSPVIFAGGQAYTIQGQYAIP-----------QPDLTKLHQLAMQQSHFPMT-- 224
Query: 285 NSDRIPFPYGSERPGHGPTFDRPPSPRSWTPQGVGGGDPRGFDASSGFTPRNRPVESGNH 344
HG T GF +P + +G
Sbjct: 225 ---------------HGNT---------------------GFSGIESSSPEVKGYWAGLD 248
Query: 345 AAILTSTTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATEGVVMVSGTS 404
A+ T T+ E+ IP + + + ++ IRQ+SGA + + +P G+T+ V ++G++
Sbjct: 249 ASAQT-TSHELTIPNDLIGCIIRRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTITGSA 307
Query: 405 DQMRAAQSLIH 415
+ AQ LI+
Sbjct: 308 ASISLAQYLIN 318
>gi|363747267|ref|XP_423701.3| PREDICTED: poly(rC)-binding protein 2-like isoform 4 [Gallus
gallus]
Length = 307
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 87/371 (23%), Positives = 146/371 (39%), Gaps = 84/371 (22%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMRH 109
+ +LL H +VGS+IGK G V+ + E+GA I I++ + ERI+ ++ N+ +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISE--GNCPERIITLAGPTNAIFKA 71
Query: 110 SPAQDAVMRVHSRIAEIGFEPGQA----VVARLLVHSQQIGCLLGRGGHIVSEMRRATGA 165
+ ++ I+ A V RL+V + Q G L+G+GG + E+R +TGA
Sbjct: 72 FAM--IIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGA 129
Query: 166 SIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKRPGPNNGHSY- 224
++V D P + + + + G S+ + + I + E+ P G +
Sbjct: 130 QVQV-AGDMLP---NSTERAITIAGIPQSIIECVKQICVVMLES--------PPKGVTIP 177
Query: 225 LPPFPEMPPPPFRPRHNPASPGSYPSPVGPFHSMDRGMGPSQPFDHQAAFSHGMDPMVPP 284
P P P F G Y P P HQ A PM
Sbjct: 178 YRPKPSSSPVIFAGGQAYTIQGQYAIP-----------QPDLTKLHQLAMQQSHFPM--- 223
Query: 285 NSDRIPFPYGSERPGHGPTFDRPPSPRSWTPQGVGGGDPRGFDASSGFTPRNRPVESGNH 344
HG T G G DAS+
Sbjct: 224 --------------SHGNT-----------------GFSAGLDASA-------------- 238
Query: 345 AAILTSTTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATEGVVMVSGTS 404
+T+ E+ IP + + G + ++ IRQ+SGA + + +P G+T+ V ++G++
Sbjct: 239 ----QTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTITGSA 294
Query: 405 DQMRAAQSLIH 415
+ AQ LI+
Sbjct: 295 ASISLAQYLIN 305
>gi|148672030|gb|EDL03977.1| poly(rC) binding protein 2, isoform CRA_d [Mus musculus]
Length = 316
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 86/370 (23%), Positives = 148/370 (40%), Gaps = 84/370 (22%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMRH 109
+ +LL H +VGS+IGK G V+ + E+GA I I++ + ERI+ ++ N+ +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISE--GNCPERIITLAGPTNAIFKA 71
Query: 110 SPAQDAVMRVHSRIAEIGFEPGQA----VVARLLVHSQQIGCLLGRGGHIVSEMRRATGA 165
+ ++ I+ A V RL+V + Q G L+G+GG + E+R +TGA
Sbjct: 72 FAM--IIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGA 129
Query: 166 SIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKRPGPNNGHSYL 225
++V D P + + + + G S+ + + I + E+ P G +
Sbjct: 130 QVQV-AGDMLP---NSTERAITIAGIPQSIIECVKQICVVMLES--------PPKGVTI- 176
Query: 226 PPFPEMPPPPFRPRHNPASPGSYPSPVGPFHSMDRGMGPSQPFDHQAAFSHGMDPMVPPN 285
P+RP+ P S P G HQ A PM N
Sbjct: 177 ---------PYRPK-----PSSSPVIFA---------GGQLTKLHQLAMQQSHFPMTHGN 213
Query: 286 SDRIPFPYGSERPGHGPTFDRPPSPRSWTPQGVGGGDPRGFDASSGFTPRNRPVESGNHA 345
+ G P W G DAS+
Sbjct: 214 TGF-----------SGIESSSPEVKGYW-----------GLDASA--------------- 236
Query: 346 AILTSTTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATEGVVMVSGTSD 405
+T+ E+ IP + + G + ++ IRQ+SGA + + +P G+T+ V ++G++
Sbjct: 237 ---QTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTITGSAA 293
Query: 406 QMRAAQSLIH 415
+ AQ LI+
Sbjct: 294 SISLAQYLIN 303
>gi|195377361|ref|XP_002047459.1| GJ11921 [Drosophila virilis]
gi|194154617|gb|EDW69801.1| GJ11921 [Drosophila virilis]
Length = 589
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 84/370 (22%), Positives = 147/370 (39%), Gaps = 64/370 (17%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMR- 108
+ +L+ +VGS+IGK G IV F+ E+GA I I+D ERIV +S N+
Sbjct: 24 LTIRLIMQGKEVGSIIGKKGEIVNRFREESGAKINISD--GSCPERIVTVSGTTNAIFSA 81
Query: 109 HSPAQDAVMRVHSRIAEIGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIR 168
+ S+ ++G + RL+V + Q G L+G+ G + E+R+ TG SI+
Sbjct: 82 FTLITKKFEEWCSQFNDVGKVGKTQIPIRLIVPASQCGSLIGKSGSKIKEIRQTTGCSIQ 141
Query: 169 VFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKRPGPNNGHSYLPPF 228
V + P + + V + G+ + ++ I + ++ P
Sbjct: 142 V-ASEMLP---NSTERAVTLSGSAEQITQCIYQI------CLVMLESP------------ 179
Query: 229 PEMPPPPFRPRHNPASPGSYPSPVGPFHSMDRGMGPSQPFDHQAAFSHGMDPMVPPNSDR 288
P P+RP+ P GP + Q F Q ++
Sbjct: 180 PRGATIPYRPK---------PQVTGPVI-----LANGQAFTIQGNYA------------- 212
Query: 289 IPFPYGSERPGHGPTFDRPPSPRSWTPQGVGGGDPRGFDASSGFTPRNRPVESGNHAAIL 348
+P ++ P TP GG + A +G R + N A
Sbjct: 213 VPTQEVAKNP---LASLAALGLAGMTPASTGGINHTALAALAGSQLR---TANANRAQ-- 264
Query: 349 TSTTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKP---GATEGVVMVSGTSD 405
E+ + + + G+ + ++ IRQISGA + +++ + G T+ + +SG D
Sbjct: 265 -QQQHEMTVSNDLIGCIIGKGGTKIAEIRQISGAMIRISNCEEREGGNTDRTITISGNPD 323
Query: 406 QMRAAQSLIH 415
+ AQ LI+
Sbjct: 324 SVALAQYLIN 333
Score = 42.7 bits (99), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Query: 47 EEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIA-DILPDSEERIVVIS 100
+ ++ +L+ + GSLIGK GS ++ + TG SI++A ++LP+S ER V +S
Sbjct: 104 KTQIPIRLIVPASQCGSLIGKSGSKIKEIRQTTGCSIQVASEMLPNSTERAVTLS 158
Score = 40.8 bits (94), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 40/80 (50%), Gaps = 7/80 (8%)
Query: 129 EPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAPRCGSPHDEIVQV 188
+P + RL++ +++G ++G+ G IV+ R +GA I + GS + IV V
Sbjct: 19 DPSVTLTIRLIMQGKEVGSIIGKKGEIVNRFREESGAKINISD-------GSCPERIVTV 71
Query: 189 IGNYHSVQDALFHITSRLRE 208
G +++ A IT + E
Sbjct: 72 SGTTNAIFSAFTLITKKFEE 91
>gi|291409711|ref|XP_002721142.1| PREDICTED: poly(rC) binding protein 2-like isoform 1 [Oryctolagus
cuniculus]
Length = 362
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 94/393 (23%), Positives = 166/393 (42%), Gaps = 84/393 (21%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMRH 109
+ +LL H +VGS+IGK G V+ + E+GA I I++ + ERI+ ++ N+ +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISE--GNCPERIITLAGPTNAIFKA 71
Query: 110 SPAQDAVMRVHSRIAEIGFEPGQA----VVARLLVHSQQIGCLLGRGGHIVSEMRRATGA 165
+ ++ I+ A V RL+V + Q G L+G+GG + E+R +TGA
Sbjct: 72 FAM--IIDKLEEDISSSMTNSTAASRPLVTLRLVVPASQCGSLIGKGGCKIKEIRESTGA 129
Query: 166 SIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKRPGPNNGHSYL 225
++V D P + + + + G S+ + + HI + E+ P G +
Sbjct: 130 QVQV-AGDMLP---NSTERAITIAGIPQSIIECVKHICVVMLES--------PPKGVTI- 176
Query: 226 PPFPEMPPPPFRPRHNPASPGSYPSPVGPFHSMDRGMGPSQPFDHQAAFSHGMDPMVPPN 285
P+RP+ P+S SPV DR +S G
Sbjct: 177 ---------PYRPK--PSS-----SPVIFAGGQDR-------------YSTG-------- 199
Query: 286 SDRIPFPYGSERPGHGPTFDRPPSPRSWTPQG-----------------------VGGGD 322
SD FP+ + P + PP ++T QG + G+
Sbjct: 200 SDSASFPHTTPSMCLNPDLEGPP-LEAYTIQGQYAIPQPDLTKLHQLAVQQSHFPMTHGN 258
Query: 323 PRGFDASSGFTPRNRPVESGNHAAILTSTTIEVVIPQLYMAHVYGENNSNLSHIRQISGA 382
GF +P + +G A+ T T+ E+ IP + + G + ++ I Q+SGA
Sbjct: 259 -TGFSGIESSSPEVKGYWAGLDASAQT-TSHELTIPNDLIGCIIGCQGAKINEICQMSGA 316
Query: 383 NVVVNDPKPGATEGVVMVSGTSDQMRAAQSLIH 415
+ + + G+T+ V ++G++ + AQ LI+
Sbjct: 317 LIKIANTVEGSTDRQVTITGSAASISLAQYLIN 349
>gi|395536909|ref|XP_003770451.1| PREDICTED: poly(rC)-binding protein 3 isoform 2 [Sarcophilus
harrisii]
Length = 361
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 97/390 (24%), Positives = 158/390 (40%), Gaps = 63/390 (16%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMRH 109
+ +LL H +VGS+IGK G V+ + E+GA I I++ + ERIV I+
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE--GNCPERIVTITG-------- 63
Query: 110 SPAQDAVMRVHSRIAEIGFEPGQA-------------VVARLLVHSQQIGCLLGRGGHIV 156
DA+ + + IA FE V RL+V + Q G L+G+GG +
Sbjct: 64 --PTDAIFKAFAMIA-YKFEEDIINSMSNSTATSKPPVTLRLVVPASQCGSLIGKGGSKI 120
Query: 157 SEMRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKRP 216
E+R +TGA ++V D P + + V + G ++ + I + E+
Sbjct: 121 KEIRESTGAQVQV-AGDMLP---NSTERAVTISGTPDAIIQCVKQICVVMLES------- 169
Query: 217 GPNNGHSY-LPPFPEMPPPPFRPRHNPASPGSYPSPVGPFHSMDRGMGPSQPFDHQAAFS 275
P G + P P P F A P + + + + P+ Q A
Sbjct: 170 -PPKGATIPYRPKPASTPVIFAGGQVRADPLAASTANLSLLLQHQPL-PAYTIQGQYAIP 227
Query: 276 H-GMDPMVPPNSDRIPF-PYGSERPGHGPTFDRPPSPRSWTPQGVGGGDPRGFDASSGFT 333
H + + + PF P G P ++ P S Q + G P G DAS
Sbjct: 228 HPDLTKLHQLAMQQTPFPPLGQTTPAF--PGEKLPLHSSEEAQNLMGQSP-GLDAS---- 280
Query: 334 PRNRPVESGNHAAILTSTTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGA 393
P S + I P + + G + ++ IRQ+SGA + + + G+
Sbjct: 281 ----PPASTHELTI----------PNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEGS 326
Query: 394 TEGVVMVSGTSDQMRAAQSLIHAFILCGVT 423
+E + ++GT + AQ LI+A + VT
Sbjct: 327 SERQITITGTPANISLAQYLINARLTSEVT 356
>gi|442634098|ref|NP_001262198.1| mushroom-body expressed, isoform L [Drosophila melanogaster]
gi|440216175|gb|AGB94891.1| mushroom-body expressed, isoform L [Drosophila melanogaster]
Length = 368
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 83/373 (22%), Positives = 148/373 (39%), Gaps = 58/373 (15%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMR- 108
+ +L+ +VGS+IGK G IV F+ E+GA I I+D ERIV +S N+
Sbjct: 24 LTIRLIMQGKEVGSIIGKKGEIVNRFREESGAKINISD--GSCPERIVTVSGTTNAIFSA 81
Query: 109 HSPAQDAVMRVHSRIAEIGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIR 168
+ S+ ++G + RL+V + Q G L+G+ G + E+R+ TG SI+
Sbjct: 82 FTLITKKFEEWCSQFNDVGKVGKTQIPIRLIVPASQCGSLIGKSGSKIKEIRQTTGCSIQ 141
Query: 169 VFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKRPGPNNGHSYLPPF 228
V + P + + V + G+ + ++ I + E+ P G +
Sbjct: 142 V-ASEMLP---NSTERAVTLSGSAEQITQCIYQICLVMLES--------PPRGATI---- 185
Query: 229 PEMPPPPFRPRHNPASPGSYPSPVGPFHSMDRGMGPSQPFDHQAAFSHGMDPMVPPNSDR 288
P+RP+ P GP + Q F Q ++
Sbjct: 186 ------PYRPK---------PQVTGPVI-----LANGQAFTIQGNYA------------- 212
Query: 289 IPFPYGSERPGHGPTFDRPPSPRSWTPQGVGGGDPRGFDASSGFTPRNRPVESGNHAAIL 348
+P ++ P P GG + G ++ + + N A
Sbjct: 213 VPTQEVAKNP---LASLAALGLAGMNPASTGGINHTGSAPAALAALAGSQLRTANPANRA 269
Query: 349 TSTTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKP---GATEGVVMVSGTSD 405
E+ + + + G+ + ++ IRQISGA + +++ + G T+ + +SG D
Sbjct: 270 QQQQHEMTVSNDLIGCIIGKGGTKIAEIRQISGAMIRISNCEEREGGNTDRTITISGNPD 329
Query: 406 QMRAAQSLIHAFI 418
+ AQ LI+ I
Sbjct: 330 SVALAQYLINMRI 342
Score = 44.7 bits (104), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 51/99 (51%), Gaps = 8/99 (8%)
Query: 137 RLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQ 196
+ V + IGC++G+GG ++E+R+ +GA IR+ ++ R G D + + GN SV
Sbjct: 275 EMTVSNDLIGCIIGKGGTKIAEIRQISGAMIRISNCEE--REGGNTDRTITISGNPDSVA 332
Query: 197 DALFHITSRLRETIFPMKRPG-PNNGHSYLPPFPEMPPP 234
A + I R+ M+ G P G+ Y+ P + P
Sbjct: 333 LAQYLINMRI-----SMETAGLPIPGYHYIAPSAIVKTP 366
Score = 42.4 bits (98), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Query: 47 EEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIA-DILPDSEERIVVIS 100
+ ++ +L+ + GSLIGK GS ++ + TG SI++A ++LP+S ER V +S
Sbjct: 104 KTQIPIRLIVPASQCGSLIGKSGSKIKEIRQTTGCSIQVASEMLPNSTERAVTLS 158
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 40/80 (50%), Gaps = 7/80 (8%)
Query: 129 EPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAPRCGSPHDEIVQV 188
+P + RL++ +++G ++G+ G IV+ R +GA I + GS + IV V
Sbjct: 19 DPSVTLTIRLIMQGKEVGSIIGKKGEIVNRFREESGAKINISD-------GSCPERIVTV 71
Query: 189 IGNYHSVQDALFHITSRLRE 208
G +++ A IT + E
Sbjct: 72 SGTTNAIFSAFTLITKKFEE 91
>gi|90652817|ref|NP_001035073.1| uncharacterized protein LOC664755 [Danio rerio]
gi|68533566|gb|AAH98540.1| Zgc:110045 [Danio rerio]
Length = 222
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 95/209 (45%), Gaps = 34/209 (16%)
Query: 35 HETVGGRNRMFYEEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEE 94
+E GG + + +LL H +VGS+IGK G V+ + E+GA I I+D S E
Sbjct: 2 NEREGGVSEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISD--GSSPE 59
Query: 95 RIVVISARENSEMRHSPAQDAVMRVHSRIAEIGFEPGQA------------VVARLLVHS 142
RIV I+ A + + + + IAE E A V RL+ +
Sbjct: 60 RIVTITG----------ASEVIFKAFAMIAEKFEEDILASMINSTVTSRPPVTLRLVFPA 109
Query: 143 QQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHI 202
Q G L+G+GG + E+R +TGA ++V D P + V + G H++ + HI
Sbjct: 110 SQCGSLIGKGGSKIKEIRESTGAQVQV-AGDLLP---DSTERAVTISGTPHAITQCVKHI 165
Query: 203 TSRLRET-----IFPMK-RPGPNNGHSYL 225
+ + E+ P + +P GH+ L
Sbjct: 166 CTVMLESPPKGATIPYRPKPSAGGGHTVL 194
>gi|449274935|gb|EMC83962.1| Poly(rC)-binding protein 4 [Columba livia]
Length = 324
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 89/382 (23%), Positives = 145/382 (37%), Gaps = 94/382 (24%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMRH 109
+ ++L H ++GS+IGK G V+ + ++ A I I++ ERI I+
Sbjct: 23 LTLRMLMHGKEIGSIIGKKGETVKRIREQSSARITISE--GSCPERITTITG-------- 72
Query: 110 SPAQDAVMRVHSRIA--------------EIGFEPGQAVVARLLVHSQQIGCLLGRGGHI 155
+ DAV R S IA +G P V RL++ + Q G L+G+ G
Sbjct: 73 --STDAVFRAVSMIAFKLEEDLGAGSDGAAVGRSP---VTLRLVIPASQCGSLIGKAGAK 127
Query: 156 VSEMRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKR 215
+ E+R +TGA ++V D P + + V V G V D + H ++ I +
Sbjct: 128 IREIRESTGAQVQV-AGDLLP---NSTERAVTVSG----VPDTIIHCVRQICAVILEVPT 179
Query: 216 PGPNNGHSYLPPFPEMPPPPFRPRHNPASPGSYPSPVGPFHSMDRGMGPSQPFDHQAAFS 275
P P PP SP ++ SP P A
Sbjct: 180 ESPTQAWGAFPHQHGYLPPKMTLSLISWSPCTHQSPPNP------------------AVG 221
Query: 276 HGMDPMVPPNSDRIPFPYGSERPGHGPTFDRPPSPRSWTPQGVGGGDPRGFDASSGFTPR 335
P++ Y RP TP P G D SS
Sbjct: 222 KHWHPIMTD-------AYSYWRPT--------------TPLLTSLSLPPGLDTSS----- 255
Query: 336 NRPVESGNHAAILTSTTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATE 395
+++ E ++P + + G + S +S IRQ+SGA++ + + G++E
Sbjct: 256 -------------QNSSQEFLVPNDLIGCIIGRHGSKISEIRQMSGAHIKIGNQTEGSSE 302
Query: 396 GVVMVSGTSDQMRAAQSLIHAF 417
V ++G+ + AQ LI A+
Sbjct: 303 RHVTITGSPVSITVAQYLITAW 324
>gi|443685583|gb|ELT89137.1| hypothetical protein CAPTEDRAFT_171528 [Capitella teleta]
Length = 398
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 93/192 (48%), Gaps = 25/192 (13%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSE--ERIVVISARENSEM 107
V ++L G++IGKGG+ ++ +++ A++ + PDS ER++ + A + +
Sbjct: 26 VELRILLQSKNAGAIIGKGGANIKRLRSDYNATVTV----PDSSGPERVLTVGANLGTAL 81
Query: 108 RHSPAQDAVMRVHSRIAEIGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASI 167
+ + R ++ FE R L+H Q GC++GRGG+ + E+R TGA I
Sbjct: 82 EILLDVIPSLEDYKRFKDLEFE----CEMRWLIHQSQAGCVIGRGGNKIKELRDETGAQI 137
Query: 168 RVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKRPGPNNGHS--YL 225
+V+ + AP+ + IVQ+ G V ++L TIF + + P G + Y
Sbjct: 138 KVYSQ-CAPQS---SERIVQLTGKPRVVVNSL--------ATIFDLLQTAPPKGFNNPYD 185
Query: 226 P-PFPEMPPPPF 236
P F E P +
Sbjct: 186 PNNFDEFYAPEY 197
Score = 45.4 bits (106), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 38/62 (61%)
Query: 354 EVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATEGVVMVSGTSDQMRAAQSL 413
+V IP+ + G+ S + IRQ SGA + +++P G+ + ++ ++G+ DQ++ AQ L
Sbjct: 327 QVSIPKDLAGAIIGKGGSRIRQIRQESGAGINIDEPMQGSQDRIITITGSQDQIQNAQYL 386
Query: 414 IH 415
+
Sbjct: 387 LQ 388
Score = 43.9 bits (102), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Query: 47 EEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKI-ADILPDSEERIVVISAR 102
E E + L H + G +IG+GG+ ++ ++ETGA IK+ + P S ERIV ++ +
Sbjct: 101 EFECEMRWLIHQSQAGCVIGRGGNKIKELRDETGAQIKVYSQCAPQSSERIVQLTGK 157
Score = 40.4 bits (93), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 31/46 (67%)
Query: 59 DKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISAREN 104
D G++IGKGGS +R + E+GA I I + + S++RI+ I+ ++
Sbjct: 333 DLAGAIIGKGGSRIRQIRQESGAGINIDEPMQGSQDRIITITGSQD 378
>gi|242021846|ref|XP_002431354.1| polyrC binding protein, putative [Pediculus humanus corporis]
gi|212516622|gb|EEB18616.1| polyrC binding protein, putative [Pediculus humanus corporis]
Length = 234
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 82/166 (49%), Gaps = 15/166 (9%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMRH 109
+ +L+ +VGS+IGK G IV+ F+ E+GA I I+D ERIV ++ N+ +
Sbjct: 15 LTIRLIMQGKEVGSIIGKKGEIVKRFREESGAKINISD--GSCPERIVTVTGPTNAIFK- 71
Query: 110 SPAQDAVMRVHSRIAEIGFEPGQA------VVARLLVHSQQIGCLLGRGGHIVSEMRRAT 163
A + + E+ G + RL+V + Q G L+G+GG + E+R T
Sbjct: 72 --AFSLICKKFEEFQELQSGGGSMGIPKPPITLRLIVPASQCGSLIGKGGSKIKEIREVT 129
Query: 164 GASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRET 209
GASI+V + P + + V + G ++ ++HI + E+
Sbjct: 130 GASIQV-ASEMLP---NSTERAVTISGTSEAITQCIYHICCVMLES 171
Score = 38.1 bits (87), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 40/70 (57%), Gaps = 5/70 (7%)
Query: 352 TIEVVIPQLYMAHVYGENNSNLSHIRQISGANV-VVNDPKPGATEGVVMVSGTSDQMRAA 410
T+ +++P + G+ S + IR+++GA++ V ++ P +TE V +SGTS+ +
Sbjct: 101 TLRLIVPASQCGSLIGKGGSKIKEIREVTGASIQVASEMLPNSTERAVTISGTSEAI--T 158
Query: 411 QSLIHAFILC 420
Q + H I C
Sbjct: 159 QCIYH--ICC 166
>gi|32564028|ref|NP_491825.2| Protein F26B1.2, isoform c [Caenorhabditis elegans]
gi|373218907|emb|CCD64193.1| Protein F26B1.2, isoform c [Caenorhabditis elegans]
Length = 380
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 89/370 (24%), Positives = 145/370 (39%), Gaps = 43/370 (11%)
Query: 53 KLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMRHSPA 112
+LL G++IGKGG ++ + E A +++ D ++ ER+ ++A E + + +
Sbjct: 36 RLLVSSKSAGAIIGKGGENIKRLRAEFNAHVQVPD--SNTPERVCTVTADEKTVL--NIL 91
Query: 113 QDAVMRVHSRIAEIGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPK 172
+D + R+ +E +P + R+LVH G L+GR G + E+R A +++F
Sbjct: 92 KDVLPRLEDNFSE--RDPCEV---RMLVHQSHAGALIGRNGSKIKELREKCSARLKIF-T 145
Query: 173 DQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKRPGPNNGHSYLPPFPEMP 232
AP D ++ G +V + + L+E P+K + YLP F P
Sbjct: 146 GCAP---GSTDRVLITSGEQKNVLGIIEEVMKELKE--IPIK----GSATPYLPAFNYDP 196
Query: 233 PPPFR----PRHNPASPGSYPSPVGPFHSMDRGMGPSQPFDHQAAFSHGMDPMVPPNSDR 288
P + PA G P+ GP P P + A + G D
Sbjct: 197 SNISDYGGFPGNMPA--GGPPNNRGPAPQRGGQGPPGGPRSYGGAITQGGGQRSFEAGDF 254
Query: 289 IPFPYGSERPGHGPTFDRPPSPRSWTPQGVGGGDPRGFDASSGFTPRNRPVESGNHAAIL 348
F R G GP S + PQ G P N
Sbjct: 255 QQF-----RGGPGPVPGYAMSAPGYPPQQGQFGAP------------NNAGYGYGPGGGG 297
Query: 349 TSTTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATEGVVMVSGTSDQMR 408
TT +V IP + G ++ IRQ SGA + + G E ++ + GT Q+
Sbjct: 298 PVTTAQVTIPSDLGGTIIGRGGERIARIRQESGAQITLEQSN-GQPERIITIKGTEQQIH 356
Query: 409 AAQSLIHAFI 418
+AQ L+ +
Sbjct: 357 SAQYLLQQCV 366
>gi|148222025|ref|NP_001090223.1| neuro-oncological ventral antigen 2 [Xenopus laevis]
gi|49256115|gb|AAH72959.1| Nova1 protein [Xenopus laevis]
Length = 413
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 94/414 (22%), Positives = 162/414 (39%), Gaps = 86/414 (20%)
Query: 42 NRMFYEEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIA---DILPDSEERIVV 98
N + E+ K+L GS+IGKGG + Q ETGA+IK++ D P + ER+ +
Sbjct: 26 NTAAEDGELFLKVLIPSYAAGSIIGKGGQTIVQLQRETGATIKLSKSKDFYPGTTERVCL 85
Query: 99 ISARENSEMRHSPAQDAVMRVHSRIAEIGFE--------------PGQAVV-------AR 137
+ + +A++ VH+ IAE E P Q+ + A+
Sbjct: 86 VQG----------SAEALLSVHNFIAEKVREVPQGAPKNDLGVLLPPQSTINAERAKQAK 135
Query: 138 LLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQD 197
L+V + G ++G+GG V + +GA +++ Q P + H+ +V V G VQ
Sbjct: 136 LIVPNTTAGLIIGKGGATVRNIMEESGAWVQL---SQKPAGSNLHERVVTVSGEPSQVQK 192
Query: 198 ALFHITSRLRETIFPMKRPGPNNGHSYLPPF---PEMPPPPFRPRHNPASPGSYPSPVGP 254
A+ I + RE P G ++L + P P +P + G+ + P
Sbjct: 193 AIHSIIHKSRED--------PPQGTTHLNISYINTQGPVANSNPTGSPYAGGAAEPVLTP 244
Query: 255 FHSMDRGMGPSQPFDHQAAFSHGMDPMVPPNSDRIPFPYG-SERPGHGPTFDRPPSPRSW 313
F QP G D + + YG S G+ P
Sbjct: 245 F----------QPAPPAPPAISGGDLLAISAALNTLASYGYSTGMGYNPL---------- 284
Query: 314 TPQGVGGGDPRGFDASSGFTPRNRP----------VESGNHAAILTSTTIEVVIPQLYMA 363
VGG P + + +T P +E ++ T+E+ +P+ +
Sbjct: 285 ----VGGVHPAAVNLLASYTGEAGPSLGLGGGGILLEKMGAESVTGKETLEMAVPETLVG 340
Query: 364 HVYGENNSNLSHIRQISGANVVVNDPK---PGATEGVVMVSGTSDQMRAAQSLI 414
+ G+ L ++++GA + ++ PG V ++G +AAQ LI
Sbjct: 341 AILGKGGKTLVEYQELTGARIQISKKGEFVPGTRSRKVTITGPPGATQAAQYLI 394
>gi|195022402|ref|XP_001985568.1| GH14429 [Drosophila grimshawi]
gi|193899050|gb|EDV97916.1| GH14429 [Drosophila grimshawi]
Length = 362
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 86/373 (23%), Positives = 149/373 (39%), Gaps = 64/373 (17%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEM-R 108
+ +L+ +VGS+IGK G IV F+ E+GA I I+D ERIV +S ++
Sbjct: 24 LTIRLIMQGKEVGSIIGKKGEIVNRFREESGAKINISD--GSCPERIVTVSGTTSAIFAA 81
Query: 109 HSPAQDAVMRVHSRIAEIGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIR 168
+ S+ ++G + RL+V + Q G L+G+ G + E+R+ TG SI+
Sbjct: 82 FTLITKKFEEWCSQFNDVGKVGKTQIPIRLIVPASQCGSLIGKSGSKIKEIRQNTGCSIQ 141
Query: 169 VFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKRPGPNNGHSYLPPF 228
V + P + + V + G+ + ++ I + E+ P G +
Sbjct: 142 V-ASEMLP---NSTERAVTLSGSAEQITQCIYQICLVMLES--------PPRGATI---- 185
Query: 229 PEMPPPPFRPRHNPASPGSYPSPVGPFHSMDRGMGPSQPFDHQAAFSHGMDPMVPPNSDR 288
P+RP+ P GP + Q F Q ++
Sbjct: 186 ------PYRPK---------PQVTGPVI-----LANGQAFTIQGNYA------------- 212
Query: 289 IPFPYGSERPGHGPTFDRPPSPRSWTPQGVGGGDPRGFDASSGFTPRNRPVESGNHAAIL 348
+P S+ P TP GG + A +G R + N A
Sbjct: 213 VPTQEVSKNP---LASLAALGLAGMTPASTGGINHTALAALAGSQLRT---ANANRAQ-- 264
Query: 349 TSTTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKP---GATEGVVMVSGTSD 405
E+ + + + G+ + ++ IRQISGA + +++ + G T+ + +SG D
Sbjct: 265 -QQQHEMTVSNDLIGCIIGKGGTKIAEIRQISGAMIRISNCEEREGGNTDRTITISGNPD 323
Query: 406 QMRAAQSLIHAFI 418
+ AQ LI+ I
Sbjct: 324 SVALAQYLINMRI 336
Score = 44.7 bits (104), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 51/99 (51%), Gaps = 8/99 (8%)
Query: 137 RLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQ 196
+ V + IGC++G+GG ++E+R+ +GA IR+ ++ R G D + + GN SV
Sbjct: 269 EMTVSNDLIGCIIGKGGTKIAEIRQISGAMIRISNCEE--REGGNTDRTITISGNPDSVA 326
Query: 197 DALFHITSRLRETIFPMKRPG-PNNGHSYLPPFPEMPPP 234
A + I R+ M+ G P G+ Y+ P + P
Sbjct: 327 LAQYLINMRI-----SMETAGLPIPGYHYIAPSAIVKTP 360
Score = 42.7 bits (99), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Query: 47 EEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIA-DILPDSEERIVVIS 100
+ ++ +L+ + GSLIGK GS ++ + TG SI++A ++LP+S ER V +S
Sbjct: 104 KTQIPIRLIVPASQCGSLIGKSGSKIKEIRQNTGCSIQVASEMLPNSTERAVTLS 158
Score = 39.7 bits (91), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 39/80 (48%), Gaps = 7/80 (8%)
Query: 129 EPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAPRCGSPHDEIVQV 188
+P + RL++ +++G ++G+ G IV+ R +GA I + GS + IV V
Sbjct: 19 DPSVTLTIRLIMQGKEVGSIIGKKGEIVNRFREESGAKINISD-------GSCPERIVTV 71
Query: 189 IGNYHSVQDALFHITSRLRE 208
G ++ A IT + E
Sbjct: 72 SGTTSAIFAAFTLITKKFEE 91
>gi|386771595|ref|NP_001246876.1| mushroom-body expressed, isoform H [Drosophila melanogaster]
gi|383292067|gb|AFH04547.1| mushroom-body expressed, isoform H [Drosophila melanogaster]
Length = 433
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 95/404 (23%), Positives = 153/404 (37%), Gaps = 55/404 (13%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMR- 108
+ +L+ +VGS+IGK G IV F+ E+GA I I+D ERIV +S N+
Sbjct: 24 LTIRLIMQGKEVGSIIGKKGEIVNRFREESGAKINISD--GSCPERIVTVSGTTNAIFSA 81
Query: 109 HSPAQDAVMRVHSRIAEIGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIR 168
+ S+ ++G + RL+V + Q G L+G+ G + E+R+ TG SI+
Sbjct: 82 FTLITKKFEEWCSQFNDVGKVGKTQIPIRLIVPASQCGSLIGKSGSKIKEIRQTTGCSIQ 141
Query: 169 VFPK------DQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKRPGPNNGH 222
V + ++A ++I Q I Q L + S R P RP P
Sbjct: 142 VASEMLPNSTERAVTLSGSAEQITQCI-----YQICLVMLESPPRGATIPY-RPKPQ--- 192
Query: 223 SYLPPFPEMPPPPFRPRHNPASPGSYPSPVGPFHSMDRGMGPSQPFDHQAAFSHGMDPMV 282
P F + N A P PV P G+ A S DP++
Sbjct: 193 -VTGPVILANGQAFTIQGNYAVPTQETCPVFPLALATGGL--------HAGISGLADPLL 243
Query: 283 PPNSDRIPFPYGSERPGHGPTFDRPP-------SPRSWTPQGVGGGDPRG-FDASSGFTP 334
+ P P + P P GG + G AS+
Sbjct: 244 KGAHLQGAIPAHHHHLQQMPDVAKNPLASLAALGLAGMNPASTGGINHTGELSASAARCQ 303
Query: 335 RN-----------------RPVESGNHAAILTSTTIEVVIPQLYMAHVYGENNSNLSHIR 377
+ + + N A E+ + + + G+ + ++ IR
Sbjct: 304 TDFQSNLGSAPAALAALAGSQLRTANPANRAQQQQHEMTVSNDLIGCIIGKGGTKIAEIR 363
Query: 378 QISGANVVVNDPKP---GATEGVVMVSGTSDQMRAAQSLIHAFI 418
QISGA + +++ + G T+ + +SG D + AQ LI+ I
Sbjct: 364 QISGAMIRISNCEEREGGNTDRTITISGNPDSVALAQYLINMRI 407
Score = 43.9 bits (102), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 51/99 (51%), Gaps = 8/99 (8%)
Query: 137 RLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQ 196
+ V + IGC++G+GG ++E+R+ +GA IR+ ++ R G D + + GN SV
Sbjct: 340 EMTVSNDLIGCIIGKGGTKIAEIRQISGAMIRISNCEE--REGGNTDRTITISGNPDSVA 397
Query: 197 DALFHITSRLRETIFPMKRPG-PNNGHSYLPPFPEMPPP 234
A + I R+ M+ G P G+ Y+ P + P
Sbjct: 398 LAQYLINMRIS-----METAGLPIPGYHYIAPSAIVKTP 431
Score = 42.7 bits (99), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Query: 47 EEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIA-DILPDSEERIVVIS 100
+ ++ +L+ + GSLIGK GS ++ + TG SI++A ++LP+S ER V +S
Sbjct: 104 KTQIPIRLIVPASQCGSLIGKSGSKIKEIRQTTGCSIQVASEMLPNSTERAVTLS 158
Score = 40.4 bits (93), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 40/80 (50%), Gaps = 7/80 (8%)
Query: 129 EPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAPRCGSPHDEIVQV 188
+P + RL++ +++G ++G+ G IV+ R +GA I + GS + IV V
Sbjct: 19 DPSVTLTIRLIMQGKEVGSIIGKKGEIVNRFREESGAKINISD-------GSCPERIVTV 71
Query: 189 IGNYHSVQDALFHITSRLRE 208
G +++ A IT + E
Sbjct: 72 SGTTNAIFSAFTLITKKFEE 91
>gi|302839775|ref|XP_002951444.1| hypothetical protein VOLCADRAFT_105091 [Volvox carteri f.
nagariensis]
gi|300263419|gb|EFJ47620.1| hypothetical protein VOLCADRAFT_105091 [Volvox carteri f.
nagariensis]
Length = 1261
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 83/175 (47%), Gaps = 10/175 (5%)
Query: 52 FKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVI-SARENSEMRHS 110
F+LLCH + G++IGKGG VR + +GA + + + R+++I S+ N +
Sbjct: 65 FRLLCHEGQAGAVIGKGGDTVRNIRKNSGAEVSVQPPIQGHRLRVIIIDSSPGNRAVPSY 124
Query: 111 PAQDAVMRVHSRIAE-----IGFEPGQAVVARLLVHSQQIGCLLG----RGGHIVSEMRR 161
PA++A++ E +P + V RLLVHS LLG G ++
Sbjct: 125 PAKEALLTCAMLTVEGDQPLNAPDPSKLVDVRLLVHSALAAGLLGLKHSHGSLAAGDISA 184
Query: 162 ATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKRP 216
GA++ + + + P+ +E + + G + +V AL + +R F ++ P
Sbjct: 185 RCGANVIIPGEAERPKLAEADEEYLLLRGPWPAVYAALGMVADEVRRQFFELRDP 239
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 79/164 (48%), Gaps = 7/164 (4%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGAS-IKIADILPDSEERIVVISARENSEMR 108
V +KL+ K G IGKGG +R + G S +K+ + D+ R++ +S+ E +
Sbjct: 345 VTYKLVVPESKAGRFIGKGGENLRDMRLALGLSTLKVHPAVKDTSVRVLEVSSTEPAASN 404
Query: 109 HSPAQDAVMRVHSRIAE-----IGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRAT 163
A DA++ R+ + G G+ + ++L+ Q G ++G ++ ++ T
Sbjct: 405 RCAAADALLYYVERLGQNTPQGAGGNRGR-ITIKMLLQQQHCGPVVGPRAAVIRQISALT 463
Query: 164 GASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLR 207
AS V K P G+P D+ ++ G+ V +A+ + + +R
Sbjct: 464 KASCVVHKKGDVPPYGAPDDQELEAEGDAQHVFEAIRIVAAIVR 507
>gi|268567874|ref|XP_002640100.1| Hypothetical protein CBG12588 [Caenorhabditis briggsae]
Length = 398
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 90/381 (23%), Positives = 152/381 (39%), Gaps = 64/381 (16%)
Query: 53 KLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMRHSPA 112
+LL G++IGKGG ++ + E A +++ D ++ ER+ ++A E + + +
Sbjct: 53 RLLVSSKSAGAIIGKGGENIKRLRAEFNAHVQVPD--SNTPERVCTVTADEKTVL--NIL 108
Query: 113 QDAVMRVHSRIAEIGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPK 172
+D + R+ +E +P + R+L+H G L+GR G + E+R A +++F
Sbjct: 109 KDVLPRLEDNFSE--RDPCEV---RVLIHQSHAGALIGRNGTKIKELREKCSARLKIFT- 162
Query: 173 DQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKRPGPNNGHSYLPPFPEMP 232
AP D ++ G +V + + L+E P+K + YLP F P
Sbjct: 163 GCAP---GSTDRVLITSGEQKNVLAIIEEVMKELKE--IPIK----GSATPYLPSFHYDP 213
Query: 233 PPPFRPRHNPASPGSYPSPV---GPFHSMDRGMGPSQPFDHQAAFSHGMDPMVPPNSDRI 289
N + G +P V GP ++ S+G
Sbjct: 214 -------SNISEYGGFPGNVSGGGPQNNRGPAPPRGGQGPPGGPRSYG------------ 254
Query: 290 PFPYGSERPGHGP---------TFDRPPSPRSWTPQ--GVGGGDPRG-FDASSGFTPRNR 337
G+ PG GP F P P ++ G G P+G F A P N
Sbjct: 255 ----GAITPGGGPRSFEAGDFHQFRGGPVPGQYSMNAPGYAQGPPQGQFGA-----PAN- 304
Query: 338 PVESGNHAAILTSTTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATEGV 397
TT +V IP + G ++ IRQ SGA + + +P G E +
Sbjct: 305 AGYGYGPGGGGPVTTAQVTIPSDLGGTIIGRGGERIARIRQESGAQITL-EPSNGQPERI 363
Query: 398 VMVSGTSDQMRAAQSLIHAFI 418
+ + GT Q+ +AQ L+ +
Sbjct: 364 ITIKGTEQQIHSAQYLLQQCV 384
>gi|25144314|ref|NP_740869.1| Protein F26B1.2, isoform a [Caenorhabditis elegans]
gi|373218905|emb|CCD64191.1| Protein F26B1.2, isoform a [Caenorhabditis elegans]
Length = 397
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 88/370 (23%), Positives = 144/370 (38%), Gaps = 43/370 (11%)
Query: 53 KLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMRHSPA 112
+LL G++IGKGG ++ + E A +++ D ++ ER+ ++A E + + +
Sbjct: 53 RLLVSSKSAGAIIGKGGENIKRLRAEFNAHVQVPD--SNTPERVCTVTADEKTVL--NIL 108
Query: 113 QDAVMRVHSRIAEIGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPK 172
+D + R+ +E +P + R+LVH G L+GR G + E+R A +++F
Sbjct: 109 KDVLPRLEDNFSE--RDPCEV---RMLVHQSHAGALIGRNGSKIKELREKCSARLKIF-T 162
Query: 173 DQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKRPGPNNGHSYLPPFPEMP 232
AP D ++ G +V + + L+E P+K + YLP F P
Sbjct: 163 GCAP---GSTDRVLITSGEQKNVLGIIEEVMKELKE--IPIK----GSATPYLPAFNYDP 213
Query: 233 PPPFR----PRHNPASPGSYPSPVGPFHSMDRGMGPSQPFDHQAAFSHGMDPMVPPNSDR 288
P + PA G P+ GP P P + A + G D
Sbjct: 214 SNISDYGGFPGNMPA--GGPPNNRGPAPQRGGQGPPGGPRSYGGAITQGGGQRSFEAGDF 271
Query: 289 IPFPYGSERPGHGPTFDRPPSPRSWTPQGVGGGDPRGFDASSGFTPRNRPVESGNHAAIL 348
F R G GP S + PQ F N
Sbjct: 272 QQF-----RGGPGPVPGYAMSAPGYPPQ------------QGQFGAPNNAGYGYGPGGGG 314
Query: 349 TSTTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATEGVVMVSGTSDQMR 408
TT +V IP + G ++ IRQ SGA + + G E ++ + GT Q+
Sbjct: 315 PVTTAQVTIPSDLGGTIIGRGGERIARIRQESGAQITLEQSN-GQPERIITIKGTEQQIH 373
Query: 409 AAQSLIHAFI 418
+AQ L+ +
Sbjct: 374 SAQYLLQQCV 383
>gi|270001418|gb|EEZ97865.1| hypothetical protein TcasGA2_TC000237 [Tribolium castaneum]
Length = 415
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 83/171 (48%), Gaps = 23/171 (13%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMRH 109
+ +L+ +VGS+IGK G IV+ F+ E+GA I I+D ERIV ++ N+ +
Sbjct: 15 LTIRLIMQGKEVGSIIGKKGEIVKRFREESGAKINISD--GSCPERIVTVTGSTNAIFK- 71
Query: 110 SPAQDAVMRVHSRIAEIGFE-----------PGQAVVARLLVHSQQIGCLLGRGGHIVSE 158
A + + E + P + RL+V + Q G L+G+GG + E
Sbjct: 72 -----AFTLICKKFEEWCSQFQDINSGGSGVPRPPITLRLIVPASQCGSLIGKGGSKIKE 126
Query: 159 MRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRET 209
+R TGASI+V + P + + V + G ++ ++HI + + E+
Sbjct: 127 IREVTGASIQV-ASEMLP---NSTERAVTISGTGEAITQCIYHICTVMLES 173
Score = 41.6 bits (96), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 48/92 (52%), Gaps = 8/92 (8%)
Query: 137 RLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQ 196
+ V ++ IGC++G+GG ++E+R+ +GA IR+ D R D + + GN +V
Sbjct: 322 EMTVPNELIGCIIGKGGTKIAEIRQISGAMIRISNCDD--RESGVTDRTITISGNPDAVA 379
Query: 197 DALFHITSRLRETIFPMKRPG-PNNGHSYLPP 227
A + I R+ M+ G P G+ Y+ P
Sbjct: 380 LAQYLINMRIS-----METAGLPMPGYHYIAP 406
Score = 40.4 bits (93), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 38/68 (55%), Gaps = 3/68 (4%)
Query: 354 EVVIPQLYMAHVYGENNSNLSHIRQISGANVVV---NDPKPGATEGVVMVSGTSDQMRAA 410
E+ +P + + G+ + ++ IRQISGA + + +D + G T+ + +SG D + A
Sbjct: 322 EMTVPNELIGCIIGKGGTKIAEIRQISGAMIRISNCDDRESGVTDRTITISGNPDAVALA 381
Query: 411 QSLIHAFI 418
Q LI+ I
Sbjct: 382 QYLINMRI 389
>gi|79550843|ref|NP_178410.2| putative RNA-binding protein [Arabidopsis thaliana]
gi|45752620|gb|AAS76208.1| At2g03110 [Arabidopsis thaliana]
gi|46359791|gb|AAS88759.1| At2g03110 [Arabidopsis thaliana]
gi|330250570|gb|AEC05664.1| putative RNA-binding protein [Arabidopsis thaliana]
Length = 153
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 76/149 (51%), Gaps = 28/149 (18%)
Query: 83 IKIADILPDSEERIVVISARENSEMRH----------SPAQDAVMRVHS----------- 121
+++ + LP +ER+V I + NSE R+ PA DA+ +VH
Sbjct: 1 MRVNEALPGCDERVVTIYS--NSEERNRIEDDNEDFVCPAFDALFKVHDMVVVEEFDDDD 58
Query: 122 -RIAEIGFEPGQAVV-ARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAPRCG 179
+ GQ VV R+LV S QIG L+G+GG I+ +R T A IRV D P C
Sbjct: 59 DYNDNDEYSEGQTVVTVRMLVPSDQIGYLIGKGGPIIQTLRNDTNAQIRV-RNDNLPMCA 117
Query: 180 SP--HDEIVQVIGNYHSVQDALFHITSRL 206
HDE++Q+IG+ +V++AL+ + L
Sbjct: 118 LALSHDELLQIIGDPSAVREALYQVAFLL 146
Score = 38.9 bits (89), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 26/36 (72%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKI 85
V ++L D++G LIGKGG I++T +N+T A I++
Sbjct: 73 VTVRMLVPSDQIGYLIGKGGPIIQTLRNDTNAQIRV 108
>gi|218189965|gb|EEC72392.1| hypothetical protein OsI_05673 [Oryza sativa Indica Group]
gi|222622089|gb|EEE56221.1| hypothetical protein OsJ_05205 [Oryza sativa Japonica Group]
Length = 442
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 84/172 (48%), Gaps = 12/172 (6%)
Query: 51 VFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIAD-ILPDSEERIVVISARENSEMRH 109
VF+L+ DKVG LIG+ G ++ +T A +++ + + RIV+ISA E S+
Sbjct: 98 VFRLVVATDKVGGLIGRRGDTIKRLCEDTRARVRVLEAAAAAAANRIVLISATEESQAEL 157
Query: 110 SPAQDAVMRVHSRIAEI----------GFEPGQAVVARLLVHSQQIGCLLGRGGHIVSEM 159
PA DA +++ I +I G P + A+LLV S Q L+G+ G + +
Sbjct: 158 PPAMDAAIKIFMHINDIEKINCDDTLSGSAP-EKCSAKLLVPSAQATHLIGKQGVRIKSI 216
Query: 160 RRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIF 211
+ TGA++++ K + + IV + G V AL + LR+ +
Sbjct: 217 QETTGATVKIIDKVELLSYDVVDERIVDIHGAPLKVLHALKSVLGVLRKFLV 268
>gi|47214279|emb|CAG01336.1| unnamed protein product [Tetraodon nigroviridis]
Length = 408
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 87/349 (24%), Positives = 151/349 (43%), Gaps = 49/349 (14%)
Query: 71 IVRTFQNETGASIKIADILPDSEERIVVISARENSEMRHSPAQDAVMRVHSRIAEIGFEP 130
++ +FQ ++GA I I++ + ERIV I+ ++ + + A A I + P
Sbjct: 88 LLLSFQ-QSGARINISE--GNCPERIVTITGPTDAIFK-AFAMIAYKFEEDIINSMSNSP 143
Query: 131 GQA---VVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAPRCGSPHDEIVQ 187
+ V RL+V + Q G L+G+GG + EMR +TGA ++V D P + + V
Sbjct: 144 ATSKPPVTLRLVVPASQCGSLIGKGGSKIKEMRESTGAQVQV-AGDMLP---NSTERAVT 199
Query: 188 VIGNYHSVQDALFHITSRLRETIFPMKRPGPNNGHSYLPPFPEMPPPPFRPRHNPASPGS 247
+ G ++ + I + E+ P G + P+RP+ P S
Sbjct: 200 ISGTPEAIIQCVKQICVVMLES--------PPKGATI----------PYRPK-----PAS 236
Query: 248 YPSPVGPFHSMDRGMGPSQPFDHQAAFSHGMDPMVPPNSDRIPFPYGSERPGHGPTFDRP 307
P + + P Q + H + PP + P G P T+ P
Sbjct: 237 TPVIFSGGQAYTIQGQYAIPHPDQLSKLHQLAMQQPPFT-----PLGQTTPAFPGTY--P 289
Query: 308 PSPRSWTPQGVGGGDPRGFDASSGFTPRNRPVESGNHAAILTSTTIEVVIPQLYMAHVYG 367
P+ R PQ + P +SS T +++GN A +T E+ IP + + G
Sbjct: 290 PTWRPRWPQLLLSFVPADARSSSSVTAA---LDAGNQA-----STHELTIPNDLIGCIIG 341
Query: 368 ENNSNLSHIRQISGANVVVNDPKPGATEGVVMVSGTSDQMRAAQSLIHA 416
+ ++ IRQ+SGA + + + G++E + ++GT + AQ LI+A
Sbjct: 342 RQGTKINEIRQMSGAQIKIANAMEGSSERQITITGTPANISLAQYLINA 390
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 35/52 (67%), Gaps = 1/52 (1%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIA-DILPDSEERIVVIS 100
V +L+ + GSLIGKGGS ++ + TGA +++A D+LP+S ER V IS
Sbjct: 150 VTLRLVVPASQCGSLIGKGGSKIKEMRESTGAQVQVAGDMLPNSTERAVTIS 201
>gi|147832545|emb|CAN68300.1| hypothetical protein VITISV_009906 [Vitis vinifera]
Length = 408
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 45/80 (56%)
Query: 129 EPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAPRCGSPHDEIVQV 188
E V RLLV S QIGC++G+GG I+ +R +GA IR+ D P C +E++Q+
Sbjct: 278 EEANQVTVRLLVPSNQIGCVIGKGGQIIQSIRSESGAQIRILKDDHLPSCSLSSNELIQI 337
Query: 189 IGNYHSVQDALFHITSRLRE 208
V+ L+ I SRL +
Sbjct: 338 SREPFIVRKILYQIASRLHD 357
>gi|432866565|ref|XP_004070866.1| PREDICTED: poly(rC)-binding protein 2-like [Oryzias latipes]
Length = 318
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 86/372 (23%), Positives = 152/372 (40%), Gaps = 84/372 (22%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENS---- 105
+ +LL H +VGS+IGK G V+ + E+GA I I++ + ERI+ ++ S
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISE--GNCPERIITLAGPTTSIFKA 71
Query: 106 -EMRHSPAQDAVMRVHSRIAEIGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATG 164
M ++ + + P V RL+V + Q G L+G+GG + E+R + G
Sbjct: 72 FSMIIEKLEEDISNSMTNSTATSKPP---VTMRLVVPASQCGSLIGKGGCKIKEIRESAG 128
Query: 165 ASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKRPGPNNGHSY 224
A ++V D P + + + V G S+ + + I I ++ P
Sbjct: 129 AQVQV-AGDMLP---NSTERAITVAGTPQSIIECVKQI------CIVMLESP-------- 170
Query: 225 LPPFPEMPPPPFRPRHNPASPGSYPSPVGPFHSMDRGMGPSQPFDHQAAFSHGMDPMVPP 284
P+ P+RP+ P G P QA G + P
Sbjct: 171 ----PKGVTIPYRPK-----------PSG---------SPVIFAGGQAYAVQGQHAIPQP 206
Query: 285 NSDRIPFPYGSERPGHGPTFDRPPSPRSWTPQGVGGGDPRGFDASSGFTPRNRPVESGNH 344
+ ++ H + P P + + QG G DAS+ ++G+H
Sbjct: 207 DLTKL----------HQLAMQQSPFPIAHSNQGFQA----GMDASA---------QTGSH 243
Query: 345 AAILTSTTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATEGVVMVSGTS 404
E+ IP + + G + ++ IRQ+SGA + + +P G+T+ V ++G+
Sbjct: 244 ---------ELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTITGSH 294
Query: 405 DQMRAAQSLIHA 416
+ A+ LI+A
Sbjct: 295 ASISLAEYLINA 306
Score = 39.3 bits (90), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 46/85 (54%), Gaps = 10/85 (11%)
Query: 127 GFEPGQAVVAR-----LLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAPRCGSP 181
GF+ G A+ L + + IGC++GR G ++E+R+ +GA I++ P GS
Sbjct: 229 GFQAGMDASAQTGSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKI----ANPVEGST 284
Query: 182 HDEIVQVIGNYHSVQDALFHITSRL 206
D V + G++ S+ A + I +RL
Sbjct: 285 -DRQVTITGSHASISLAEYLINARL 308
>gi|332019831|gb|EGI60292.1| Poly(rC)-binding protein 3 [Acromyrmex echinatior]
Length = 566
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 80/172 (46%), Gaps = 21/172 (12%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENS---- 105
+ +L+ +VGS+IGK G IV+ F+ E+GA I I+D ERIV ++ NS
Sbjct: 18 LTIRLIMQGKEVGSIIGKKGEIVKRFREESGAKINISD--GSCPERIVTVTGPTNSIFKA 75
Query: 106 --------EMRHSPAQDAVMRVHSRIAEIGFEPGQAVVARLLVHSQQIGCLLGRGGHIVS 157
E S D + P + RL+V + Q G L+G+GG +
Sbjct: 76 FTLICKKFEEWCSQFHDVPGSGAGGGGGVSRPP---ITLRLIVPASQCGSLIGKGGSKIK 132
Query: 158 EMRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRET 209
E+R TGASI+V + P + + V + G ++ ++HI + E+
Sbjct: 133 EIREVTGASIQV-ASEMLP---NSTERAVTISGTSEAITQCIYHICCVMLES 180
Score = 42.0 bits (97), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 39/66 (59%), Gaps = 2/66 (3%)
Query: 137 RLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQ 196
+ V ++ IGC++G+GG ++E+R+ +GA IR+ ++ R G D + + GN +V
Sbjct: 374 EMTVPNELIGCIIGKGGTKIAEIRQISGAMIRISNCEE--REGGATDRTITITGNPDAVA 431
Query: 197 DALFHI 202
A + I
Sbjct: 432 LAQYLI 437
Score = 41.6 bits (96), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 53/108 (49%), Gaps = 5/108 (4%)
Query: 314 TPQGVGGGDPRGFDASSGFTPRNRPVESGNHAAILTSTTIEVVIPQLYMAHVYGENNSNL 373
TP GG +P A +G R AA + T E+ +P + + G+ + +
Sbjct: 336 TPANTGGLNPAALAALAGSQLRTNNTNRQQPAA--NNQTHEMTVPNELIGCIIGKGGTKI 393
Query: 374 SHIRQISGANVVVNDPKP---GATEGVVMVSGTSDQMRAAQSLIHAFI 418
+ IRQISGA + +++ + GAT+ + ++G D + AQ LI+ +
Sbjct: 394 AEIRQISGAMIRISNCEEREGGATDRTITITGNPDAVALAQYLINMSV 441
Score = 39.7 bits (91), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 38/80 (47%), Gaps = 7/80 (8%)
Query: 129 EPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAPRCGSPHDEIVQV 188
+P + RL++ +++G ++G+ G IV R +GA I + GS + IV V
Sbjct: 13 DPSVTLTIRLIMQGKEVGSIIGKKGEIVKRFREESGAKINISD-------GSCPERIVTV 65
Query: 189 IGNYHSVQDALFHITSRLRE 208
G +S+ A I + E
Sbjct: 66 TGPTNSIFKAFTLICKKFEE 85
Score = 38.1 bits (87), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 40/70 (57%), Gaps = 5/70 (7%)
Query: 352 TIEVVIPQLYMAHVYGENNSNLSHIRQISGANV-VVNDPKPGATEGVVMVSGTSDQMRAA 410
T+ +++P + G+ S + IR+++GA++ V ++ P +TE V +SGTS+ +
Sbjct: 110 TLRLIVPASQCGSLIGKGGSKIKEIREVTGASIQVASEMLPNSTERAVTISGTSEAI--T 167
Query: 411 QSLIHAFILC 420
Q + H I C
Sbjct: 168 QCIYH--ICC 175
>gi|291409713|ref|XP_002721143.1| PREDICTED: poly(rC) binding protein 2-like isoform 2 [Oryctolagus
cuniculus]
Length = 340
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 89/371 (23%), Positives = 163/371 (43%), Gaps = 62/371 (16%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMRH 109
+ +LL H +VGS+IGK G V+ + E+GA I I++ + ERI+ ++ N+ +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISE--GNCPERIITLAGPTNAIFKA 71
Query: 110 SPAQDAVMRVHSRIAEIGFEPGQA----VVARLLVHSQQIGCLLGRGGHIVSEMRRATGA 165
+ ++ I+ A V RL+V + Q G L+G+GG + E+R +TGA
Sbjct: 72 FAM--IIDKLEEDISSSMTNSTAASRPLVTLRLVVPASQCGSLIGKGGCKIKEIRESTGA 129
Query: 166 SIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKRPGPNNGHSYL 225
++V D P + + + + G S+ + + HI + ++ P
Sbjct: 130 QVQV-AGDMLP---NSTERAITIAGIPQSIIECVKHI------CVVMLESP--------- 170
Query: 226 PPFPEMPPPPFRPRHNPASPGSYPSPVGPFHSMDR-GMGPSQPFDHQAAFSHGMDPMVPP 284
P+ P+RP+ P+S SPV DR G + + Q ++
Sbjct: 171 ---PKGVTIPYRPK--PSS-----SPVIFAGGQDRYSTGSDKAYTIQGQYA--------- 211
Query: 285 NSDRIPFPYGSERPGHGPTFDRPPSPRSWTPQGVGGGDPRGFDASSGFTPRNRPVESGNH 344
IP P ++ + +S P G G ++SS P + +G
Sbjct: 212 ----IPQPDLTK-------LHQLAVQQSHFPMTHGNTGFSGIESSS---PEVKGYWAGLD 257
Query: 345 AAILTSTTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATEGVVMVSGTS 404
A+ T T+ E+ IP + + G + ++ I Q+SGA + + + G+T+ V ++G++
Sbjct: 258 ASAQT-TSHELTIPNDLIGCIIGCQGAKINEICQMSGALIKIANTVEGSTDRQVTITGSA 316
Query: 405 DQMRAAQSLIH 415
+ AQ LI+
Sbjct: 317 ASISLAQYLIN 327
>gi|242093092|ref|XP_002437036.1| hypothetical protein SORBIDRAFT_10g019330 [Sorghum bicolor]
gi|241915259|gb|EER88403.1| hypothetical protein SORBIDRAFT_10g019330 [Sorghum bicolor]
Length = 319
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 48/141 (34%), Positives = 70/141 (49%), Gaps = 22/141 (15%)
Query: 71 IVRTFQNETGASIKIADILPDSEERIV--VISARENSEMR---HSPAQDAVMRVHSRIAE 125
V ++E+GA + + RI+ V AR ++ R SPAQ+A++ VH RI E
Sbjct: 107 FVAKVRDESGAFVTVHPPFAGDYVRIIETVDGARREADGRPPMFSPAQEALLMVHRRILE 166
Query: 126 I--------------GFEPGQ--AVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRV 169
G +P RL+V +GCLLG+GG I+ +MR T IR+
Sbjct: 167 TDADDGDEDGEYGPRGKDPRDRGKTTTRLIVPKLHVGCLLGKGGKIIEQMRMETKTHIRI 226
Query: 170 FPKDQ-APRCGSPHDEIVQVI 189
P+DQ PRC S +E+VQ +
Sbjct: 227 LPRDQHTPRCVSLSEEVVQSL 247
>gi|41055221|ref|NP_957486.1| poly(rC)-binding protein 2 [Danio rerio]
gi|28279638|gb|AAH45508.1| Poly(rC) binding protein 2 [Danio rerio]
gi|37681899|gb|AAQ97827.1| poly(rC) binding protein 2 [Danio rerio]
gi|42744604|gb|AAH66603.1| Pcbp2 protein [Danio rerio]
Length = 318
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 87/377 (23%), Positives = 157/377 (41%), Gaps = 94/377 (24%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISA------RE 103
+ +LL H +VGS+IGK G V+ + E+GA I I++ + ERI+ ++ +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISE--GNCPERIITLAGPTTAIFKA 71
Query: 104 NSEMRHSPAQDAVMRVHSRIAEIGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRAT 163
S + +D + S ++ V R++V + Q G L+G+GG + E+R +T
Sbjct: 72 FSMIIEKLEED----ISSSMSNSTATSKPPVTLRIVVPASQCGSLIGKGGCKIKEIREST 127
Query: 164 GASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKRPGPNNGHS 223
GA ++V D P + + + + G S+ + + I + E+ P G +
Sbjct: 128 GAQVQV-AGDMLP---NSTERAITIAGTPLSIIECVKQICVVMLES--------PPKGVT 175
Query: 224 YLPPFPEMPPPPFRPRHNPASP----GSYPSPVGPFHSMDRGMGPSQPFDHQAAFSHGMD 279
P+RP+ + SP G V H++ + P HQ A
Sbjct: 176 I----------PYRPKPS-GSPVIFAGGQAYAVQGQHAIPQ---PDLTKLHQLAMQQS-- 219
Query: 280 PMVPPNSDRIPFPYGSERPGHGPTFDRPPSPRSWTPQGVGGGDPRGFDASSGFTPRNRPV 339
PFP PS + +T G DAS+
Sbjct: 220 ----------PFPLA-------------PSSQGFTA---------GMDASA--------- 238
Query: 340 ESGNHAAILTSTTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATEGVVM 399
++G+H E+ IP + + G + ++ IRQ+SGA + + +P G+++ V
Sbjct: 239 QTGSH---------ELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSSDRQVT 289
Query: 400 VSGTSDQMRAAQSLIHA 416
++G+ + A+ LI+A
Sbjct: 290 ITGSPASISLAEYLINA 306
>gi|156102214|ref|XP_001616800.1| RNA-binding protein Nova-1 [Plasmodium vivax Sal-1]
gi|148805674|gb|EDL47073.1| RNA-binding protein Nova-1, putative [Plasmodium vivax]
Length = 335
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 89/167 (53%), Gaps = 23/167 (13%)
Query: 53 KLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIA---DILPDSEERIVVISARENSEMRH 109
K+L + GS+IGK GSI+ + +N+TG S+K++ P+++ER++V+ ++
Sbjct: 21 KMLVNNLVAGSVIGKNGSIITSIENKTGCSLKLSPTNSYFPNTQERVLVLCGKQ------ 74
Query: 110 SPAQDAVMRVHSRIAEI---GFEPGQAV------VARLLVHSQQIGCLLGRGGHIVSEMR 160
+A++ + +I +I F+ Q + R++V + ++G+GG + +++
Sbjct: 75 EQINNALLIILDKIRQITTQNFQDKQNMNTSPKYTCRIVVPKSAVSAIIGKGGQQIKQLQ 134
Query: 161 RATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLR 207
TGA I++ + R ++ I+ +IG + S+ D +T+ ++
Sbjct: 135 DTTGAKIQI-----SSREDGLNERIISIIGPFESISDTAIKVTNSIQ 176
>gi|402592326|gb|EJW86255.1| hypothetical protein WUBG_02833 [Wuchereria bancrofti]
Length = 313
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 97/210 (46%), Gaps = 29/210 (13%)
Query: 16 HQRGYAPGYHSRGYSSGPGHETVGGRNRMFYEEEVV------FKLLCHLDKVGSLIGKGG 69
QR P ++ GYS+G T G R R ++ + +LL G++IGK G
Sbjct: 3 RQRIEDPYGYNYGYSTGL---TAGKRQRQDSYQKALADGKYELRLLVTSRGAGAIIGKKG 59
Query: 70 SIVRTFQNETGASIKIADILPDSE--ERIV-VISARENSEMRHSPAQDAVMRVHSRIAEI 126
V+ Q E A++ + PDS+ ER+V +++A EN V + +RI E+
Sbjct: 60 ESVKNIQTECDATVSV----PDSQTPERVVQLVAAVEN-------VVKCVEMIIARIDEV 108
Query: 127 GFEPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAPRCGSPHDEIV 186
+ ++LVH G ++GRGG + E+R G ++V+ + C + I+
Sbjct: 109 HDNQDRDSELKVLVHQSHAGAVIGRGGSRIKELREENGVDLKVY----SECCPQSTERII 164
Query: 187 QVIGNYHSVQDALFHITSRLRETIFPMKRP 216
Q+ G + L I + L+E P+K P
Sbjct: 165 QINGKPEKIVACLVTIINTLKE--IPIKGP 192
>gi|296213265|ref|XP_002753197.1| PREDICTED: poly(rC)-binding protein 2-like isoform 1 [Callithrix
jacchus]
Length = 342
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 86/369 (23%), Positives = 145/369 (39%), Gaps = 80/369 (21%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMR- 108
+ +LL H +VGS+IGK G V+ + E+GA I I++ + ERI+ ++ N+ +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISE--GNCPERIITLAGPTNAIFKA 71
Query: 109 HSPAQDAVMR-VHSRIAEIGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASI 167
+ D + + S + V L+V + Q G L+G+GG + E+R +TGA +
Sbjct: 72 FAMIIDKLEEDIRSSMTNSTAASRPPVTLSLVVPASQCGSLIGKGGCKIKEIRESTGAQV 131
Query: 168 RVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKRPGPNNGHSY-LP 226
+V D P + + + + G S+ + + + IF + P G +
Sbjct: 132 QV-AGDMLP---NSTERAITIAGIPQSIIECV--------KQIFVVMLESPPKGVTIPYR 179
Query: 227 PFPEMPPPPFRPRHNPASPGSYPSPVGPFHSMDRGMGPSQPFDHQAAFSHGMDPMVPPNS 286
P P P F G Y P P HQ A PM
Sbjct: 180 PKPSSSPVIFAGGQAYTIQGQYAIP-----------QPDLTKLHQLAIQQSHFPMT---- 224
Query: 287 DRIPFPYGSERPGHGPTFDRPPSPRSWTPQGVGGGDPRGFDASSGFTPRNRPVESGNHAA 346
HG T G G DAS+
Sbjct: 225 -------------HGNT-----------------GFSAGLDASA---------------- 238
Query: 347 ILTSTTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATEGVVMVSGTSDQ 406
+T+ E+ IP + + G + ++ IRQ+SGA + + +P G+T+ V ++G++
Sbjct: 239 --QTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTITGSAAS 296
Query: 407 MRAAQSLIH 415
+ AQ LI+
Sbjct: 297 ISLAQYLIN 305
Score = 43.1 bits (100), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 52/113 (46%), Gaps = 11/113 (9%)
Query: 127 GFEPG-----QAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAPRCGSP 181
GF G Q L + + IGC++GR G ++E+R+ +GA I++ P GS
Sbjct: 229 GFSAGLDASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKI----ANPVEGST 284
Query: 182 HDEIVQVIGNYHSVQDALFHITSRLRETIFPMKRPGPNNGHSYLPPFPEMPPP 234
D V + G+ S+ A + I RL M NN S + PF PPP
Sbjct: 285 -DRQVTITGSAASISLAQYLINVRLSLVTGGMGS-SYNNADSSIIPFCCSPPP 335
>gi|348518109|ref|XP_003446574.1| PREDICTED: poly(rC)-binding protein 3-like [Oreochromis niloticus]
Length = 349
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 93/384 (24%), Positives = 155/384 (40%), Gaps = 85/384 (22%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMRH 109
+ +LL H +VGS+IGK G V+ + ++GA I I++ + ERIV I+
Sbjct: 16 LTIRLLMHGKEVGSIIGKKGETVKKMREDSGARINISE--GNCPERIVTITG-------- 65
Query: 110 SPAQDAVMRVHSRIA---------EIGFEPGQA---VVARLLVHSQQIGCLLGRGGHIVS 157
DA+ + + IA + P + V RL+V + Q G L+G+GG +
Sbjct: 66 --PTDAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIK 123
Query: 158 EMRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKRPG 217
EMR +TGA ++V D P + + V + G ++ + I L E+
Sbjct: 124 EMRESTGAQVQV-AGDMLP---NSTERAVTISGAPEAIIQCVKQICVVLLES-------- 171
Query: 218 PNNGHSYLPPFPEMPPPPFRPRHNPASPGSYPSPVGPFHSMDRGMGPSQP-----FDHQA 272
P G + P+RP+ P S P +G S HQ
Sbjct: 172 PPKGATI----------PYRPK-----PASTPVIFSGGQVRADPLGASTANLSLLLQHQP 216
Query: 273 AFSHGMDPMVPPNSDRIPFPYGSERPGHGPTFDRPPSPRSWTPQGVGGGDPRGFDASSGF 332
++ + IP P S+ H + P +TP G G DAS+
Sbjct: 217 LPAYTIQ-----GQYAIPHPDLSKL--HQLAMQQTP----FTPLGQTTPAFPGLDASN-- 263
Query: 333 TPRNRPVESGNHAAILTSTTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPG 392
++ H + + I +I G + ++ IRQ+SGA + + + G
Sbjct: 264 -------QASTHELTIPNDLIGCII---------GRQGTKINEIRQMSGAQIKIANAMEG 307
Query: 393 ATEGVVMVSGTSDQMRAAQSLIHA 416
++E + ++GT + AQ LI+A
Sbjct: 308 SSERQITITGTPANISLAQYLINA 331
>gi|296081618|emb|CBI20623.3| unnamed protein product [Vitis vinifera]
Length = 479
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 68/245 (27%), Positives = 110/245 (44%), Gaps = 43/245 (17%)
Query: 60 KVGSLIGKGGSIVRTFQNETGASIKIA---DILPDSEERIVVISARENSEMRHSPAQDAV 116
+VG +IGKGG ++ Q ++GA I++ D P+S R+V E+ +P D +
Sbjct: 146 RVGVIIGKGGETIKYLQLQSGAKIQVTRDMDADPNSPTRLV--------ELMGTP--DQI 195
Query: 117 MRVHSRIAEIGFEP---GQAVVARLL------------VHSQQIGCLLGRGGHIVSEMRR 161
+ I ++ E G +V+R L V + ++G ++G+GG + M+
Sbjct: 196 AKAEQLINDVLSEAEAGGSGIVSRRLTGQAGSEQFVMKVPNNKVGLIIGKGGETIKNMQA 255
Query: 162 ATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIF---PMKRPGP 218
TGA I+V P P + + VQ+ G ++ A + + E M P
Sbjct: 256 RTGARIQVIPL-HLPPGDTSMERTVQIDGTSEQIESAKQLVNEVISENRIRNPAMAGGYP 314
Query: 219 NNGHSYLPP----FPEMPPPPFRPRHNPASPGSYPSPVGPFHSMDR--GMGPSQP----F 268
G+ PP P PP +P ++ A PGSYP P P ++M + G SQP +
Sbjct: 315 QQGYQARPPSGWGAPPGAPPMQQPGYSYAQPGSYPGPS-PQYNMSQPAYAGYSQPNATGW 373
Query: 269 DHQAA 273
D AA
Sbjct: 374 DQTAA 378
>gi|147844462|emb|CAN82085.1| hypothetical protein VITISV_031054 [Vitis vinifera]
Length = 473
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 93/393 (23%), Positives = 148/393 (37%), Gaps = 91/393 (23%)
Query: 49 EVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERI------------ 96
+ VF+L+ + KVGS+IG+ G +++ ET A I++ D + +RI
Sbjct: 77 DCVFRLIVPVLKVGSIIGRKGELIKKMCEETRARIRVLDGAVGTSDRIGXMEKKMLSVLL 136
Query: 97 ---------VVISARENSEMRHSPAQDAVMRVHSRIAEIGFEPGQAVVARLLVHSQQIGC 147
V+IS RE E SPA DAV+RV R+ + G + + V++ + C
Sbjct: 137 KVVDNLLEKVLISGREEPEAPLSPAMDAVIRVFKRVTGLSESEGDGLFDQ--VNTGEHWC 194
Query: 148 LLGRG-----GHIVSEMRRATGASIRVF--PKDQAPRCGSPHDEIVQVIGNYHSVQDALF 200
+ H S+ + S V+ +++ P + + IV++ G VQ AL
Sbjct: 195 ICASTVRSWFAHFGSKFQNLXAFSXEVYLLXQNEVPFYAAADERIVELQGEALKVQKALE 254
Query: 201 HITSRLRETIFPMKRPGPNNGHSYLPPFPEMPPPPF---RPRHNPASP----GSYPSPVG 253
+ LR+ + HS LP F R A G+ + +G
Sbjct: 255 AVVGHLRKFLVD---------HSVLPLFERTYNATISQDRQSDTWADKSLLHGTSQTGMG 305
Query: 254 PFHSMDRGMGPSQPFDHQAAFSHGMDPMVPPNSDRIPFPYGSERPGHGPTFDRPPSPRSW 313
+S+ S D + H PM YG E HG + R
Sbjct: 306 SDYSLP-AKRESLYLDRETQMEHSGLPM-----------YGQE---HGLSGIR------- 343
Query: 314 TPQGVGGGDPRGFDASSGFTPRNRPVESGNHAAILTSTTIEVVIPQLYMAHVYGENNSNL 373
SSG P I+T + IP Y + G +N+
Sbjct: 344 ---------------SSGLGRAGAP--------IVTQIAQTMQIPLSYAEDIIGIGGANI 380
Query: 374 SHIRQISGANVVVNDPKPGATEGVVMVSGTSDQ 406
++IR+ SGA + V + + E V + GTS Q
Sbjct: 381 AYIRRTSGAILTVQESRGLPDEITVEIKGTSSQ 413
>gi|71895775|ref|NP_001025686.1| neuro-oncological ventral antigen 2 [Xenopus (Silurana) tropicalis]
gi|62205009|gb|AAH93475.1| neuro-oncological ventral antigen 2 [Xenopus (Silurana) tropicalis]
Length = 413
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 93/407 (22%), Positives = 156/407 (38%), Gaps = 86/407 (21%)
Query: 49 EVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIA---DILPDSEERIVVISARENS 105
E+ K+L GS+IGKGG + Q ETGA+IK++ D P + ER+ ++
Sbjct: 33 ELFLKVLIPSYAAGSIIGKGGQTIVQLQRETGATIKLSKSKDFYPGTTERVCLVQG---- 88
Query: 106 EMRHSPAQDAVMRVHSRIAEIGFE--------------PGQAVV-------ARLLVHSQQ 144
+ ++++ VH+ IAE E P Q + A+L+V +
Sbjct: 89 ------SAESLLSVHNFIAEKVREVPQGGTKNDLGVLLPPQTTINAERAKQAKLIVPNTT 142
Query: 145 IGCLLGRGGHIVSEMRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITS 204
G ++G+GG V + +GA +++ K P H+ +V V G VQ A+ I
Sbjct: 143 AGLIIGKGGATVRSIMEESGAWVQLSQKPAGPNL---HERVVTVSGEPSQVQKAIRSIIH 199
Query: 205 RLRETIFPMKRPGPNNGHSYLP---PFPEMPPPPFRPRHNPASPGSYPSPVGPFHSMDRG 261
+ RE P G ++L + P P +P + GS + PF
Sbjct: 200 KSRED--------PPQGTTHLNISYTNSQGPVANSNPTGSPYAGGSAEQVLTPF------ 245
Query: 262 MGPSQPFDHQAAFSHGMDPMVPPNSDRIPFPYG-SERPGHGPTFDRPPSPRSWTPQGVGG 320
QP G D + + YG S G P VGG
Sbjct: 246 ----QPAPPAPPAITGGDLLAISAALNTLASYGYSTGMGFNPL--------------VGG 287
Query: 321 GDPRGFDASSGFTPRNRPV----------ESGNHAAILTSTTIEVVIPQLYMAHVYGENN 370
P + + +T P E ++ T+E+ +P+ + + G+
Sbjct: 288 VHPAAVNLLASYTGEAGPALGLGGGGILLEKMGAESVTGKETLEMAVPETLVGAILGKGG 347
Query: 371 SNLSHIRQISGANVVVNDPK---PGATEGVVMVSGTSDQMRAAQSLI 414
L ++++GA + ++ PG V ++G +AAQ LI
Sbjct: 348 KTLVEYQELTGARIQISKKGEFVPGTRSRKVTITGPPGATQAAQYLI 394
>gi|322796009|gb|EFZ18633.1| hypothetical protein SINV_09712 [Solenopsis invicta]
Length = 440
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 80/172 (46%), Gaps = 21/172 (12%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENS---- 105
+ +L+ +VGS+IGK G IV+ F+ E+GA I I+D ERIV ++ NS
Sbjct: 18 LTIRLIMQGKEVGSIIGKKGEIVKRFREESGAKINISD--GSCPERIVTVTGPTNSIFKA 75
Query: 106 --------EMRHSPAQDAVMRVHSRIAEIGFEPGQAVVARLLVHSQQIGCLLGRGGHIVS 157
E S D + P + RL+V + Q G L+G+GG +
Sbjct: 76 FTLICKKFEEWCSQFHDIQGGGAGGGGGVSRPP---ITLRLIVPASQCGSLIGKGGSKIK 132
Query: 158 EMRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRET 209
E+R TGASI+V + P + + V + G ++ ++HI + E+
Sbjct: 133 EIREVTGASIQV-ASEMLP---NSTERAVTISGTSEAITQCIYHICCVMLES 180
Score = 42.7 bits (99), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 40/69 (57%), Gaps = 2/69 (2%)
Query: 137 RLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQ 196
+ V ++ IGC++G+GG ++E+R+ +GA IR+ ++ R G D + + GN +V
Sbjct: 374 EMTVPNELIGCIIGKGGTKIAEIRQISGAMIRISNCEE--REGGATDRTITITGNPDAVA 431
Query: 197 DALFHITSR 205
A + I R
Sbjct: 432 LAQYLINMR 440
Score = 41.6 bits (96), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 52/105 (49%), Gaps = 5/105 (4%)
Query: 314 TPQGVGGGDPRGFDASSGFTPRNRPVESGNHAAILTSTTIEVVIPQLYMAHVYGENNSNL 373
TP GG +P A +G R AA + T E+ +P + + G+ + +
Sbjct: 336 TPANTGGLNPAALAALAGSQLRTSNTNRQQPAA--NNQTHEMTVPNELIGCIIGKGGTKI 393
Query: 374 SHIRQISGANVVVNDPKP---GATEGVVMVSGTSDQMRAAQSLIH 415
+ IRQISGA + +++ + GAT+ + ++G D + AQ LI+
Sbjct: 394 AEIRQISGAMIRISNCEEREGGATDRTITITGNPDAVALAQYLIN 438
Score = 39.3 bits (90), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 38/80 (47%), Gaps = 7/80 (8%)
Query: 129 EPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAPRCGSPHDEIVQV 188
+P + RL++ +++G ++G+ G IV R +GA I + GS + IV V
Sbjct: 13 DPSVTLTIRLIMQGKEVGSIIGKKGEIVKRFREESGAKINISD-------GSCPERIVTV 65
Query: 189 IGNYHSVQDALFHITSRLRE 208
G +S+ A I + E
Sbjct: 66 TGPTNSIFKAFTLICKKFEE 85
>gi|357123010|ref|XP_003563206.1| PREDICTED: RNA-binding protein Nova-1-like [Brachypodium
distachyon]
Length = 311
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 88/166 (53%), Gaps = 16/166 (9%)
Query: 51 VFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIA---DILPDSEERIVVISARENSEM 107
V L+ H++ G +IGK GSIV++ ++++GA I I+ + P + R+V++S N M
Sbjct: 29 VMFLVSHME-AGCIIGKAGSIVKSMESQSGARINISRHDQLFPGTTSRVVLVSGLFNQLM 87
Query: 108 RHSPAQDAVMRVHSRIAEIGFE--PGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGA 165
DA+ + R+ G + +A +A L+V S G L+G+GG + + + A
Sbjct: 88 ------DAMELILERLVYQGDQVIDSKATIA-LVVPSVCCGALIGKGGATLKAITQKASA 140
Query: 166 SIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIF 211
I++ P+D + HD +V + G+ + A+F I S+L E +
Sbjct: 141 GIKISPQDNSY---GLHDRLVTITGSLDNQLRAIFLILSKLLEDVL 183
Score = 39.3 bits (90), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 69/304 (22%), Positives = 118/304 (38%), Gaps = 40/304 (13%)
Query: 127 GFEPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQA-PRCGSPHDEI 185
G + G+ LV + GC++G+ G IV M +GA I + DQ P S +
Sbjct: 20 GSDGGKKKHVMFLVSHMEAGCIIGKAGSIVKSMESQSGARINISRHDQLFPGTTS---RV 76
Query: 186 VQVIGNYHSVQDALFHITSRL---------RETIFPMKRPGPNNGHSYLPPFPEMPPPPF 236
V V G ++ + DA+ I RL + + P G
Sbjct: 77 VLVSGLFNQLMDAMELILERLVYQGDQVIDSKATIALVVPSVCCG-----ALIGKGGATL 131
Query: 237 RPRHNPASPGSYPSPVGPFHSM-DRGMGPSQPFDHQA-AFSHGMDPMVPPNSDRIPFPYG 294
+ AS G SP + + DR + + D+Q A + ++ IP
Sbjct: 132 KAITQKASAGIKISPQDNSYGLHDRLVTITGSLDNQLRAIFLILSKLLEDVLYSIPIAR- 190
Query: 295 SERPGHGPTFDR-PPSPRSWTPQGVGGGDPRGFDASSGFTPRNRPVESGNHAAILTSTTI 353
F R P SP + + VG + G + TP P + + LT
Sbjct: 191 -------IVFSRYPASPVEY--ENVGSDEHVGRYQNKPNTPVRSP-DKNDGQEYLT---- 236
Query: 354 EVVIPQLYMAHVYGENNSNLSHIRQISGANVVVN---DPKPGATEGVVMVSGTSDQMRAA 410
+ I ++ V G +++ I Q+SGA + ++ D + V++SGT + ++AA
Sbjct: 237 -IAIADEHIGAVIGRAGRSINEITQVSGACIRISAKGDFIADTCDREVVISGTPEAIQAA 295
Query: 411 QSLI 414
+++I
Sbjct: 296 EAMI 299
>gi|321475563|gb|EFX86525.1| hypothetical protein DAPPUDRAFT_307836 [Daphnia pulex]
Length = 364
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 82/171 (47%), Gaps = 27/171 (15%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMRH 109
+ +LL +VGS+IGK G IV+ F+ E+GA I I+D ERIV I+
Sbjct: 18 LTIRLLMAGKEVGSIIGKKGEIVKRFREESGARINISD--GSCPERIVTITG-------- 67
Query: 110 SPAQDAVMRVHSRIA-----EIG------FEPGQAVVARLLVHSQQIGCLLGRGGHIVSE 158
DA+ + + I E+G P + RL++ + Q G L+G+GG + E
Sbjct: 68 --TTDAIFKAFNLICKKLEEEVGGPLAGTAIPRPPITLRLIMPASQCGSLIGKGGSKIKE 125
Query: 159 MRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRET 209
+R TGAS+ V + P + + V V G ++ ++HI + E+
Sbjct: 126 IREITGASV-VVASEMLP---NSTERAVTVSGTSDAITQCIYHICCVMLES 172
Score = 43.1 bits (100), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 47/95 (49%), Gaps = 7/95 (7%)
Query: 137 RLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQ 196
+ V ++ IGC++G+GG ++E+R+ +GA IR+ + S + + + G SV
Sbjct: 272 EMAVPNELIGCIIGKGGTKIAEIRQISGAMIRISNCEDRE---SSSERTITITGTAESVA 328
Query: 197 DALFHITSRLRETIFPMKRPGPNNGHSYLPPFPEM 231
A + I +RL M G+ +L P P M
Sbjct: 329 LAQYLINTRLAMETAAMGM----MGYPFLAPSPIM 359
Score = 42.7 bits (99), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 41/70 (58%), Gaps = 5/70 (7%)
Query: 352 TIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVV-NDPKPGATEGVVMVSGTSDQMRAA 410
T+ +++P + G+ S + IR+I+GA+VVV ++ P +TE V VSGTSD +
Sbjct: 102 TLRLIMPASQCGSLIGKGGSKIKEIREITGASVVVASEMLPNSTERAVTVSGTSDAI--T 159
Query: 411 QSLIHAFILC 420
Q + H I C
Sbjct: 160 QCIYH--ICC 167
Score = 38.1 bits (87), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 17/64 (26%), Positives = 39/64 (60%), Gaps = 2/64 (3%)
Query: 354 EVVIPQLYMAHVYGENNSNLSHIRQISGANVVVN--DPKPGATEGVVMVSGTSDQMRAAQ 411
E+ +P + + G+ + ++ IRQISGA + ++ + + ++E + ++GT++ + AQ
Sbjct: 272 EMAVPNELIGCIIGKGGTKIAEIRQISGAMIRISNCEDRESSSERTITITGTAESVALAQ 331
Query: 412 SLIH 415
LI+
Sbjct: 332 YLIN 335
>gi|189238821|ref|XP_968538.2| PREDICTED: similar to heterogeneous nuclear ribonucleoprotein k
[Tribolium castaneum]
gi|270010156|gb|EFA06604.1| hypothetical protein TcasGA2_TC009519 [Tribolium castaneum]
Length = 414
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 84/162 (51%), Gaps = 15/162 (9%)
Query: 47 EEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSE 106
+EEV +LL GS+IGKGG + +++ ASI + D ER++ +S+ ++
Sbjct: 20 DEEV--RLLIPSKVAGSIIGKGGQNITKLRSQYKASITVPDC--PGPERMLTLSSDLDT- 74
Query: 107 MRHSPAQDAVMRVHSRIAEIGFE-PGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGA 165
+ V V + E G G + R+++H Q GC++G+ G+ + E+R TGA
Sbjct: 75 -----ICNIVTDVVPNLEENGGRVNGNELDLRMMIHQSQAGCVIGKAGYKIKELREKTGA 129
Query: 166 SIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLR 207
I++F + AP+ D I+Q++G D++ I + ++
Sbjct: 130 RIKIF-SNVAPQS---TDRIIQIVGEPSKCVDSIREIITLIK 167
Score = 43.1 bits (100), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 49/86 (56%), Gaps = 5/86 (5%)
Query: 338 PVESG-----NHAAILTSTTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPG 392
P++SG N A + TT +V IP+ + G+ + IRQ SGA + +++P PG
Sbjct: 320 PLQSGGMGPQNGGATGSKTTTQVTIPKDLAGAIIGKGGGRIRKIRQDSGAGITIDEPLPG 379
Query: 393 ATEGVVMVSGTSDQMRAAQSLIHAFI 418
+ + ++ +SGT +Q++ AQ L+ +
Sbjct: 380 SNDRIITISGTPNQIQMAQYLLQQSV 405
>gi|242063550|ref|XP_002453064.1| hypothetical protein SORBIDRAFT_04g037690 [Sorghum bicolor]
gi|241932895|gb|EES06040.1| hypothetical protein SORBIDRAFT_04g037690 [Sorghum bicolor]
Length = 343
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 94/190 (49%), Gaps = 18/190 (9%)
Query: 52 FKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIA---DILPDSEERIVVISARENSEMR 108
+ L G +IGKGGS + FQ+++GA I+++ + P + +RI+++S + M+
Sbjct: 42 LRFLVSNTAAGCIIGKGGSTINDFQSQSGARIQLSRSHEFFPGTNDRIIMVSGLFDEVMK 101
Query: 109 HSPAQDAVMRVHSRIAEIGFEPGQAVV---ARLLVHSQQIGCLLGRGGHIVSEMRRATGA 165
A+ + ++ G E +A RL+V + G ++G+GG + + A
Sbjct: 102 ------AMELILEKLLAEGEEFNEAEARPKVRLVVPNSSCGGIIGKGGATIKSFIEESHA 155
Query: 166 SIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETI-FP--MKRPGPNNGH 222
I++ P+D HD +V V G + + +A+ I +L E + +P + P P G
Sbjct: 156 GIKISPQDN--NYVGLHDRLVTVTGTFDNQMNAIDLILKKLSEDVHYPPNLSSPFPYAGL 213
Query: 223 SYLPPFPEMP 232
++ P +P +P
Sbjct: 214 TF-PNYPGVP 222
>gi|242024312|ref|XP_002432572.1| heterogeneous nuclear ribonucleoprotein k, putative [Pediculus
humanus corporis]
gi|212518032|gb|EEB19834.1| heterogeneous nuclear ribonucleoprotein k, putative [Pediculus
humanus corporis]
Length = 365
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 82/169 (48%), Gaps = 23/169 (13%)
Query: 52 FKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMRHSP 111
+LL GS+IGKGG + + E AS+ + D ERI+ ++A
Sbjct: 25 IRLLIPSKVAGSIIGKGGHNISKLRTEHNASVTVPDC--PGPERILTVAA---------- 72
Query: 112 AQDAVMRVHSRIAEIGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFP 171
D ++RV ++EI + R+LVH Q GC++G+GG + E+R TGA I+++
Sbjct: 73 DLDTMLRV---VSEILPNLEDVIDIRMLVHQSQAGCIIGKGGLKIKELREKTGARIKIY- 128
Query: 172 KDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKRPGPNN 220
+ C D IVQ+ G + DA+ L+ + P+K G NN
Sbjct: 129 ---SNCCPQSTDRIVQINGKGNLCVDAIRECMELLKTS--PIK--GMNN 170
Score = 46.6 bits (109), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 41/70 (58%)
Query: 350 STTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATEGVVMVSGTSDQMRA 409
+ +V IP+ + G+ S + IR SGA + +++P PG+ + ++ +SGT +Q++
Sbjct: 290 KNSTQVTIPKDLAGAIIGKGGSRIRKIRMESGAAITIDEPLPGSNDRIITISGTPNQIQM 349
Query: 410 AQSLIHAFIL 419
AQ L+ ++
Sbjct: 350 AQYLLQQRLV 359
Score = 45.1 bits (105), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 37/60 (61%), Gaps = 1/60 (1%)
Query: 46 YEEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKI-ADILPDSEERIVVISAREN 104
E+ + ++L H + G +IGKGG ++ + +TGA IKI ++ P S +RIV I+ + N
Sbjct: 88 LEDVIDIRMLVHQSQAGCIIGKGGLKIKELREKTGARIKIYSNCCPQSTDRIVQINGKGN 147
Score = 43.9 bits (102), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 31/46 (67%)
Query: 59 DKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISAREN 104
D G++IGKGGS +R + E+GA+I I + LP S +RI+ IS N
Sbjct: 300 DLAGAIIGKGGSRIRKIRMESGAAITIDEPLPGSNDRIITISGTPN 345
>gi|308321889|gb|ADO28082.1| poly(rc)-binding protein 2 [Ictalurus furcatus]
Length = 318
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 85/370 (22%), Positives = 150/370 (40%), Gaps = 80/370 (21%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMR- 108
+ +LL H +VGS+IGK G V+ + E+GA I I++ + ERI+ ++ + +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISE--GNCPERIITLAGPTTAIFKA 71
Query: 109 HSPAQDAVMR-VHSRIAEIGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASI 167
S D + + S ++ V R++V + Q G L+G+GG + E+R +TGA +
Sbjct: 72 FSMIIDKLEEDISSSMSNSTATSKPPVTLRIVVPASQCGSLIGKGGCKIKEIRESTGAQV 131
Query: 168 RVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKRPGPNNGHSY-LP 226
+V D P + + + + G S+ + + I + E+ P G +
Sbjct: 132 QV-AGDMLP---NSTERAITIAGTPLSIIECVKQICVVMLES--------PPKGVTIPYR 179
Query: 227 PFPEMPPPPFRPRHNPASPGSYPSPVGPFHSMDRGMGPSQPFDHQAAFSHGMDPMVPPNS 286
P P P F A G + P P HQ A
Sbjct: 180 PKPSGSPVTFAGGQAYAVQGQHAIP-----------QPDLTKLHQLAMQQS--------- 219
Query: 287 DRIPFPYGSERPGHGPTFDRPPSPRSWTPQGVGGGDPRGFDASSGFTPRNRPVESGNHAA 346
PFP PS + +T G DA++ ++G+H
Sbjct: 220 ---PFPLA-------------PSSQGFTA---------GMDATT---------QTGSH-- 243
Query: 347 ILTSTTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATEGVVMVSGTSDQ 406
E+ IP + + G + ++ IRQ+SGA + + +P G+ + V ++G+
Sbjct: 244 -------ELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSNDRQVTITGSPAS 296
Query: 407 MRAAQSLIHA 416
+ A+ LI+A
Sbjct: 297 ISLAEYLINA 306
>gi|223949173|gb|ACN28670.1| unknown [Zea mays]
gi|238010644|gb|ACR36357.1| unknown [Zea mays]
gi|413924015|gb|AFW63947.1| transcribed sequence 1087 protein [Zea mays]
Length = 344
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 94/190 (49%), Gaps = 18/190 (9%)
Query: 52 FKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIA---DILPDSEERIVVISARENSEMR 108
+ L G +IGKGGS + FQ+++GA I+++ + P + +RI+++S + M+
Sbjct: 43 LRFLVSNTAAGCIIGKGGSTINDFQSQSGARIQLSRSNEFFPGTNDRIIMVSGLFDEVMK 102
Query: 109 HSPAQDAVMRVHSRIAEIGFEPGQAVV---ARLLVHSQQIGCLLGRGGHIVSEMRRATGA 165
A+ + ++ G E +A RL+V + G ++G+GG + + A
Sbjct: 103 ------AMELILEKLLAEGEEFNEAEARPKVRLVVPNSSCGGIIGKGGATIKSFIEESHA 156
Query: 166 SIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETI-FP--MKRPGPNNGH 222
I++ P+D HD +V + G + + +A+ I +L E + +P + P P G
Sbjct: 157 GIKISPQDN--NYVGLHDRLVTITGTFDNQMNAIDLILKKLSEDVHYPPNLSSPFPYAGL 214
Query: 223 SYLPPFPEMP 232
++ P +P +P
Sbjct: 215 TF-PSYPGVP 223
>gi|410900025|ref|XP_003963497.1| PREDICTED: poly(rC)-binding protein 2-like [Takifugu rubripes]
Length = 318
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 85/372 (22%), Positives = 152/372 (40%), Gaps = 84/372 (22%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENS---- 105
+ +LL H +VGS+IGK G V+ + E+GA I I++ + ERI+ ++ S
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISE--GNCPERIITLAGPTTSIFKA 71
Query: 106 -EMRHSPAQDAVMRVHSRIAEIGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATG 164
M ++ + + P V RL+V + Q G L+G+GG + E+R + G
Sbjct: 72 FSMIIEKLEEDISTSMTNSTATSKPP---VTIRLVVPASQCGSLIGKGGCKIKEIRESAG 128
Query: 165 ASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKRPGPNNGHSY 224
A ++V D P + + + + G S+ + + I + E+ P G +
Sbjct: 129 AQVQV-AGDMLP---NSTERAITIAGTPQSIIECVKQICVVMLES--------PPKGVTI 176
Query: 225 LPPFPEMPPPPFRPRHNPASPGSYPSPVGPFHSMDRGMGPSQPFDHQAAFSHGMDPMVPP 284
P+RP+ P G P QA G + P
Sbjct: 177 ----------PYRPK-----------PSG---------SPVIFAGGQAYAVQGQHAIPQP 206
Query: 285 NSDRIPFPYGSERPGHGPTFDRPPSPRSWTPQGVGGGDPRGFDASSGFTPRNRPVESGNH 344
+ ++ H + P P + + QG G DAS+ ++G+H
Sbjct: 207 DLTKL----------HQLAMQQSPFPIAHSNQGFQA----GMDASA---------QTGSH 243
Query: 345 AAILTSTTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATEGVVMVSGTS 404
E+ IP + + G + ++ IRQ+SGA + + +P G+T+ V ++G+
Sbjct: 244 ---------ELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTITGSH 294
Query: 405 DQMRAAQSLIHA 416
+ A+ LI+A
Sbjct: 295 ASISLAEYLINA 306
Score = 38.9 bits (89), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 46/85 (54%), Gaps = 10/85 (11%)
Query: 127 GFEPGQAVVAR-----LLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAPRCGSP 181
GF+ G A+ L + + IGC++GR G ++E+R+ +GA I++ P GS
Sbjct: 229 GFQAGMDASAQTGSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKI----ANPVEGST 284
Query: 182 HDEIVQVIGNYHSVQDALFHITSRL 206
D V + G++ S+ A + I +RL
Sbjct: 285 -DRQVTITGSHASISLAEYLINARL 308
>gi|363543195|ref|NP_001241811.1| RNA-binding protein Nova-1 [Zea mays]
gi|195659123|gb|ACG49029.1| RNA-binding protein Nova-1 [Zea mays]
Length = 344
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 96/195 (49%), Gaps = 18/195 (9%)
Query: 47 EEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIA---DILPDSEERIVVISARE 103
E+ + + L G +IGKGGS + FQ+++GA I+++ + P + +RI+++S
Sbjct: 37 EKPIHLRFLVSNASAGCIIGKGGSTINDFQSQSGARIQLSRSHEFFPGTNDRIIMVSGLF 96
Query: 104 NSEMRHSPAQDAVMRVHSRIAEIGFEPGQAVV---ARLLVHSQQIGCLLGRGGHIVSEMR 160
M+ A+ + ++ G E +A RL+V + G ++G+GG +
Sbjct: 97 GEVMK------AMELILEKLLAEGEEFNEAEARPKVRLVVPNNSCGGIIGKGGATIKSFI 150
Query: 161 RATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETI-FP--MKRPG 217
+ A I++ P+D HD +V V G + + +A+ I +L E + +P + P
Sbjct: 151 EESHAGIKISPQDN--NYVGLHDRLVTVTGTFDNQMNAIDLILKKLSEDVHYPANLSSPF 208
Query: 218 PNNGHSYLPPFPEMP 232
P G ++ P +P +P
Sbjct: 209 PYAGLTF-PSYPGVP 222
>gi|225429462|ref|XP_002278761.1| PREDICTED: uncharacterized protein LOC100259454 [Vitis vinifera]
Length = 690
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 104/233 (44%), Gaps = 37/233 (15%)
Query: 53 KLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIA---DILPDSEERIVVISARENSEMRH 109
K+ +VG +IGKGG ++ Q ++GA I++ D P+S R+V E+
Sbjct: 139 KIDIPNGRVGVIIGKGGETIKYLQLQSGAKIQVTRDMDADPNSPTRLV--------ELMG 190
Query: 110 SPAQDAVMRVHSRIAEIGFEP---GQAVVARLL------------VHSQQIGCLLGRGGH 154
+P D + + I ++ E G +V+R L V + ++G ++G+GG
Sbjct: 191 TP--DQIAKAEQLINDVLSEAEAGGSGIVSRRLTGQAGSEQFVMKVPNNKVGLIIGKGGE 248
Query: 155 IVSEMRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIF--- 211
+ M+ TGA I+V P P S + VQ+ G ++ A + + E
Sbjct: 249 TIKNMQARTGARIQVIPLHLPPGDTS-MERTVQIDGTSEQIESAKQLVNEVISENRIRNP 307
Query: 212 PMKRPGPNNGHSYLPP----FPEMPPPPFRPRHNPASPGSYPSPVGPFHSMDR 260
M P G+ PP P PP +P ++ A PGSYP P P ++M +
Sbjct: 308 AMAGGYPQQGYQARPPSGWGAPPGAPPMQQPGYSYAQPGSYPGPS-PQYNMSQ 359
>gi|194701786|gb|ACF84977.1| unknown [Zea mays]
Length = 344
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 96/195 (49%), Gaps = 18/195 (9%)
Query: 47 EEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIA---DILPDSEERIVVISARE 103
E+ + + L G +IGKGGS + FQ+++GA I+++ + P + +RI+++S
Sbjct: 37 EKPIHLRFLVSNASAGCIIGKGGSTINDFQSQSGARIQLSRSHEFFPGTNDRIIMVSGLF 96
Query: 104 NSEMRHSPAQDAVMRVHSRIAEIGFEPGQAVV---ARLLVHSQQIGCLLGRGGHIVSEMR 160
M+ A+ + ++ G E +A RL+V + G ++G+GG +
Sbjct: 97 GEVMK------AMELILEKLLAEGEEFNEAEARPKVRLVVPNSSCGGIIGKGGATIKSFI 150
Query: 161 RATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETI-FP--MKRPG 217
+ A I++ P+D HD +V V G + + +A+ I +L E + +P + P
Sbjct: 151 EESHAGIKISPQDN--NYVGLHDRLVTVTGTFDNQMNAIDLILKKLSEDVHYPANLSSPF 208
Query: 218 PNNGHSYLPPFPEMP 232
P G ++ P +P +P
Sbjct: 209 PYAGLTF-PSYPGVP 222
>gi|390474894|ref|XP_002758191.2| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2
isoform 3 [Callithrix jacchus]
Length = 1052
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 89/173 (51%), Gaps = 17/173 (9%)
Query: 46 YEEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADIL-PDSEERIVVISAREN 104
Y E+ + L VG++IGK G+ ++ GASIKIA PD ER+V+I+
Sbjct: 877 YPEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITGPPE 936
Query: 105 SEMRHSPAQDAVMRVHSRIAEIG-FEPGQAVV--ARLLVHSQQIGCLLGRGGHIVSEMRR 161
++ + A R+ ++ E F P + V A + V S G ++G+GG V+E++
Sbjct: 937 AQFK------AQGRIFGKLKEENFFNPKEEVKLEAHIRVPSSTAGRVIGKGGKTVNELQN 990
Query: 162 ATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMK 214
T A + + P+DQ P + IV++IG++ + Q A ++RE + +K
Sbjct: 991 LTSAEV-IVPRDQTP--DENEEVIVRIIGHFFASQTA----QRKIREIVQQVK 1036
>gi|318054596|ref|NP_001188110.1| poly(rC)-binding protein 2 [Ictalurus punctatus]
gi|308322769|gb|ADO28522.1| poly(rc)-binding protein 2 [Ictalurus punctatus]
Length = 318
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 86/373 (23%), Positives = 156/373 (41%), Gaps = 86/373 (23%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMR- 108
+ +LL H +VGS+IGK G V+ + E+GA I I++ + ERI+ ++ + +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISE--GNCPERIITLAGPTTAIFKA 71
Query: 109 HSPAQDAVMR-VHSRIAEIGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASI 167
S D + + S ++ V R++V + Q G L+G+GG + E+R +TGA +
Sbjct: 72 FSMIIDKLEEDISSSMSNSTATSKPPVTLRIVVPASQCGSLIGKGGCKIKEIRESTGAQV 131
Query: 168 RVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKRPGPNNGHSYLPP 227
+V D P + + + + G S+ + + I + E+ P G +
Sbjct: 132 QV-AGDMLP---NSTERAITIAGTPLSIIECVKQICVVMLES--------PPKGVTI--- 176
Query: 228 FPEMPPPPFRPRHNPASP----GSYPSPVGPFHSMDRGMGPSQPFDHQAAFSHGMDPMVP 283
P+RP+ + SP G V H++ + P HQ A
Sbjct: 177 -------PYRPKPS-GSPVIFAGGQAYAVQGQHAIPQ---PDLTKLHQLAMQQS------ 219
Query: 284 PNSDRIPFPYGSERPGHGPTFDRPPSPRSWTPQGVGGGDPRGFDASSGFTPRNRPVESGN 343
PFP PS + +T G DA++ ++G+
Sbjct: 220 ------PFPLA-------------PSSQGFTA---------GMDATT---------QTGS 242
Query: 344 HAAILTSTTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATEGVVMVSGT 403
H E+ IP + + G + ++ IRQ+SGA + + +P G+ + V ++G+
Sbjct: 243 H---------ELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSNDRQVTITGS 293
Query: 404 SDQMRAAQSLIHA 416
+ A+ LI+A
Sbjct: 294 PASISLAEYLINA 306
>gi|124808479|ref|XP_001348324.1| RNA-binding protein Nova-1, putative [Plasmodium falciparum 3D7]
gi|23497216|gb|AAN36763.1| RNA-binding protein Nova-1, putative [Plasmodium falciparum 3D7]
Length = 337
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/181 (22%), Positives = 93/181 (51%), Gaps = 24/181 (13%)
Query: 41 RNRMFYEEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIA---DILPDSEERIV 97
RN + + KLL + GS+IGK GSI+ + +N+TG S+K++ P+++ER++
Sbjct: 10 RNVLNGNQLCFVKLLINNLVAGSVIGKHGSIITSIENKTGCSLKLSPNNSYFPNTQERVL 69
Query: 98 VISARENSEMRHSPAQDAVMRVHSRIAEIG----------FEPGQAVVARLLVHSQQIGC 147
V+ + + +DA++ + +I E+ R++V +
Sbjct: 70 VLCGKIDQ------IKDALLIILDKIKEVANQHSHEKQNMMNGAAKYTCRIVVPKSAVSA 123
Query: 148 LLGRGGHIVSEMRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLR 207
++G+GG + +++ +TG+ I++ + R ++ I+ +IG++ S++D + + ++
Sbjct: 124 IIGKGGQQIKQLQDSTGSKIQI-----SSREDGLNERIITIIGSFESIRDTALKVANSIQ 178
Query: 208 E 208
+
Sbjct: 179 K 179
>gi|147767494|emb|CAN60206.1| hypothetical protein VITISV_036062 [Vitis vinifera]
Length = 242
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 68/160 (42%), Gaps = 21/160 (13%)
Query: 90 PDSEERIVVISARENSEMRHSPAQDAVMRVHSRIAEI-----GFEPGQAVVARLLVHSQQ 144
PD I + + +E E DA+ RVH ++ FE V +LLV S Q
Sbjct: 40 PDDTVYIDLYALKERLE-------DALFRVHDKVVSEKVHSEDFEEASQVTVQLLVTSDQ 92
Query: 145 IGCLLGRGGHIVSEMRRATGASIRVFPKDQAPRCGSPHDEIVQV------IGNYHSVQDA 198
IGC++G+GG I+ + +GA I + D C DE+VQ+ +G
Sbjct: 93 IGCVIGKGGQIIQNIYSESGAQIYILKNDHLLSCALSFDELVQISGERPLLGRLFIKLHL 152
Query: 199 LFHITSRLRETIFPMKRPGPNNGHSYLPPFPEMPPPPFRP 238
F I L +I P+ G ++G S + P P P
Sbjct: 153 FFMIIQHLLASIVPI---GYSSGGSLIGPTSGAPIMGLAP 189
>gi|344283688|ref|XP_003413603.1| PREDICTED: poly(rC)-binding protein 1-like [Loxodonta africana]
Length = 438
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 84/359 (23%), Positives = 150/359 (41%), Gaps = 45/359 (12%)
Query: 65 IGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMR-HSPAQDAVMR-VHSR 122
+G+ G+ V+ + E+GA I I++ + ERI+ ++ N+ + + D + ++S
Sbjct: 111 LGRKGTSVKRIREESGARINISE--GNCPERIITLTGPTNAIFKAFAMIIDKLEEDINSS 168
Query: 123 IAEIGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAPRCGSPH 182
+ V RL+V + Q G L+G+GG + E+R +TGA ++V D P +
Sbjct: 169 MTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQVA-GDMLP---NST 224
Query: 183 DEIVQVIGNYHSVQDALFHITSRLRETIFPMKRPGPNNGHSYLPPFPEMPPPPFRPRHNP 242
+ + + G SV + + I + ET+ + + P P P P
Sbjct: 225 ERAITIAGVPQSVTECVKQICLVMLETL-------SQSPQGRVMTIPYQPMPASSPVICA 277
Query: 243 ASPGSYPSPVGPFHSMDRGMGPSQPFD-HQAAFSHGMDPMVPPNSDRIPFPYGSERPGHG 301
G H+ GP P D + H + P+ D + + H
Sbjct: 278 GGQDRCSDAAGYPHATHDLEGP--PLDAYSIQGQHTISPL-----DLAKLNQVARQQSHF 330
Query: 302 PTFDRPPSPRSWTPQGVGGGDPRGFDASSGFTPRNRPVESGNHAAI--LTSTTIEVVIPQ 359
GG G D+SS P G A++ T TT E+ IP
Sbjct: 331 AMLH-------------GGTGFAGIDSSS-------PEVKGYWASLDASTQTTHELTIPN 370
Query: 360 LYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATEGVVMVSGTSDQMRAAQSLIHAFI 418
+ + G +N++ IRQ+SGA + + +P G++ V ++G++ + AQ LI+A +
Sbjct: 371 NLIGCIIGRQGANINEIRQMSGAQIKIANPVEGSSGRQVTITGSAASISLAQYLINARL 429
Score = 46.6 bits (109), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 34/52 (65%), Gaps = 1/52 (1%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIA-DILPDSEERIVVIS 100
V +L+ + GSLIGKGG ++ + TGA +++A D+LP+S ER + I+
Sbjct: 180 VTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIA 231
>gi|317418810|emb|CBN80848.1| PolyrC-binding protein 2 [Dicentrarchus labrax]
Length = 306
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 87/377 (23%), Positives = 155/377 (41%), Gaps = 95/377 (25%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISA------RE 103
+ +LL H +VGS+IGK G V+ + E+GA I I++ + ERI+ ++ +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISE--GNCPERIITLAGPTTAIFKA 71
Query: 104 NSEMRHSPAQDAVMRVHSRIAEIGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRAT 163
S + +D + S + V R++V + Q G L+G+GG + E+R +T
Sbjct: 72 FSMIIEKLEED----ISSSMTNSTATSKPPVTLRIVVPASQCGSLIGKGGCKIKEIREST 127
Query: 164 GASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKRPGPNNGHS 223
GA ++V D P + + + + G S+ + + I + E+ P G +
Sbjct: 128 GAQVQV-AGDMLP---NSTERAITIAGTPQSIIECVKQICVVMLES--------PPKGVT 175
Query: 224 YLPPFPEMPPPPFRPRHNPASP----GSYPSPVGPFHSMDRGMGPSQPFDHQAAFSHGMD 279
P+RP+ + SP G V H++ + P HQ A
Sbjct: 176 I----------PYRPKPS-GSPVIFAGGQAYAVQGQHAIPQ---PDLTKLHQLAMQQS-- 219
Query: 280 PMVPPNSDRIPFPYGSERPGHGPTFDRPPSPRSWTPQGVGGGDPRGFDASSGFTPRNRPV 339
PFP PS + +T G DAS+
Sbjct: 220 ----------PFPIA-------------PSNQGFT----------GIDASA--------- 237
Query: 340 ESGNHAAILTSTTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATEGVVM 399
++ +H E+ IP + + G + ++ IRQ+SGA + + +P G+T+ V
Sbjct: 238 QTSSH---------EMTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVDGSTDRQVT 288
Query: 400 VSGTSDQMRAAQSLIHA 416
++G+ + A+ LI+A
Sbjct: 289 ITGSPASISLAEYLINA 305
>gi|221060388|ref|XP_002260839.1| RNA-binding protein [Plasmodium knowlesi strain H]
gi|193810913|emb|CAQ42811.1| RNA-binding protein, putative [Plasmodium knowlesi strain H]
Length = 334
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/184 (22%), Positives = 96/184 (52%), Gaps = 28/184 (15%)
Query: 36 ETVGGRNRMFYEEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIA---DILPDS 92
E G N++ + + +V L+ GS+IGK GSI+ + +N+TG S+K++ P++
Sbjct: 8 EKNKGTNQLCFVKMLVNNLV-----AGSVIGKNGSIITSIENKTGCSLKLSPTNSYFPNT 62
Query: 93 EERIVVISARENSEMRHSPAQDAVMRVHSRIAEI---GFEPGQAV------VARLLVHSQ 143
+ER++V+ ++ +A++ + +I +I F+ Q + R+++
Sbjct: 63 QERVLVLCGKQ------EQINNALLIILDKIRQITVQSFQDKQNMNTVPKYTCRIVIPKS 116
Query: 144 QIGCLLGRGGHIVSEMRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHIT 203
++G+GG + +++ +TGA I++ + R ++ I+ +IG + S+ D +T
Sbjct: 117 AASAIIGKGGQQIKQLQDSTGAKIQI-----SSREDGLNERIISIIGPFESISDTAIKVT 171
Query: 204 SRLR 207
+ ++
Sbjct: 172 NSIQ 175
>gi|359486525|ref|XP_002264331.2| PREDICTED: RNA-binding protein Nova-1-like [Vitis vinifera]
Length = 309
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 86/169 (50%), Gaps = 10/169 (5%)
Query: 45 FYEEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIA---DILPDSEERIVVISA 101
F E+ + L GS+IGKGGS + FQ+++GA I+++ + P + +RI++IS
Sbjct: 29 FMEKSTYIRFLVSNAAAGSVIGKGGSTINDFQSQSGARIQLSRNHEFFPGTSDRIIMISG 88
Query: 102 RENSEMRHSPAQDAVM-RVHSRI-AEIGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSEM 159
N ++ A + ++ ++ S + E G E RL+V + G ++G+GG +
Sbjct: 89 ATNEIIK---AMELILAKLLSEMHTEDGDEADPRSKVRLIVPNSSCGGIIGKGGSTIKSF 145
Query: 160 RRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRE 208
+ ASI++ P+D D +V ++G+ A+ I S+L E
Sbjct: 146 IEDSQASIKISPQDN--NYLGLTDRLVTLMGSLEEQMRAIDLILSKLTE 192
>gi|348528761|ref|XP_003451884.1| PREDICTED: poly(rC)-binding protein 2-like [Oreochromis niloticus]
Length = 317
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 89/383 (23%), Positives = 155/383 (40%), Gaps = 107/383 (27%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMRH 109
+ +LL H +VGS+IGK G V+ + E+GA I I++ + ERI+ ++
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISE--GNCPERIITLAG-------- 63
Query: 110 SPAQDAVMRVHSRIAEIGFEPGQA------------VVARLLVHSQQIGCLLGRGGHIVS 157
A+ + S I E E + V R++V + Q G L+G+GG +
Sbjct: 64 --PTTAIFKAFSMIIEKLEEDISSSMTNSTATSKPPVTLRIVVPASQCGSLIGKGGCKIK 121
Query: 158 EMRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKRPG 217
E+R +TGA ++V D P + + + + G S+ + + I + E+
Sbjct: 122 EIRESTGAQVQV-AGDMLP---NSTERAITIAGTPQSIIECVKQICVVMLES-------- 169
Query: 218 PNNGHSYLPPFPEMPPPPFRPRHNPASP----GSYPSPVGPFHSMDRGMGPSQPFDHQAA 273
P G + P+RP+ + SP G V H++ + P HQ A
Sbjct: 170 PPKGVTI----------PYRPKPS-GSPVIFAGGQAYAVQGQHAIPQ---PDLTKLHQLA 215
Query: 274 FSHGMDPMVPPNSDRIPFPYGSERPGHGPTFDRPPSPRSWTPQGVGGGDPRGFDASSGFT 333
PFP PS + +T G DAS+
Sbjct: 216 MQQS------------PFPIA-------------PSNQGFT----------GMDASA--- 237
Query: 334 PRNRPVESGNHAAILTSTTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGA 393
++ +H E+ IP + + G + ++ IRQ+SGA + + +P G+
Sbjct: 238 ------QTSSH---------EMTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVDGS 282
Query: 394 TEGVVMVSGTSDQMRAAQSLIHA 416
T+ V ++G+ + A+ LI+A
Sbjct: 283 TDRQVTITGSPASISLAEYLINA 305
>gi|395839825|ref|XP_003792776.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2
isoform 1 [Otolemur garnettii]
Length = 597
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/194 (31%), Positives = 97/194 (50%), Gaps = 17/194 (8%)
Query: 9 PPAAEPFHQRGYAPGYHSRGYSSGPGHETVGGRNRMFYEEEVVFKLLCHLDKVGSLIGKG 68
PPAA P+H GY S Y P H+ + Y E+ + L VG++IGK
Sbjct: 389 PPAA-PYHPFATHSGYFSSLY---PHHQFSPFPHHHSYPEQEIVNLFIPTQAVGAIIGKK 444
Query: 69 GSIVRTFQNETGASIKIADIL-PDSEERIVVISARENSEMRHSPAQDAVMRVHSRIAEIG 127
G+ ++ GASIKIA PD ER+V+I+ ++ + A R+ ++ E
Sbjct: 445 GAHIKQLARFAGASIKIAPAEGPDVSERMVIITGPPEAQFK------AQGRIFGKLKEEN 498
Query: 128 -FEPGQAVV--ARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAPRCGSPHDE 184
F P + V A + V S G ++G+GG V+E++ T A + + P+DQ P +
Sbjct: 499 FFNPKEEVKLEAHIRVPSSTAGRVIGKGGKTVNELQNLTSAEV-IVPRDQTP--DENEEV 555
Query: 185 IVQVIGNYHSVQDA 198
IV++IG++ + Q A
Sbjct: 556 IVRIIGHFFASQTA 569
>gi|324518489|gb|ADY47116.1| Heterogeneous nuclear ribonucleoprotein K [Ascaris suum]
gi|324519835|gb|ADY47493.1| Heterogeneous nuclear ribonucleoprotein K, partial [Ascaris suum]
Length = 361
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 89/184 (48%), Gaps = 19/184 (10%)
Query: 52 FKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSE--ERIVVISARENSEMRH 109
+LL G++IGKGG ++ + E A++ I PDS+ ERIV I A ++ +R
Sbjct: 40 LRLLVPSRGAGAVIGKGGESIKRLRAECDATLTI----PDSQTPERIVTIVAEIDNVIRC 95
Query: 110 S----PAQDAVMRVHSRIAEIGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGA 165
P D ++ E G G++ + RLLVH G ++GRGG+ + E+R T
Sbjct: 96 VNEIIPRLDECLKTRDSDDE-GSARGESEL-RLLVHQSHAGAIIGRGGYRIKELREETST 153
Query: 166 SIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKRPG-PNNGHSY 224
++V+ + C + ++Q+IG + + I + L+E P+K P P Y
Sbjct: 154 QLKVYSQC----CPQSTERVIQIIGVPEKIIACVILIINMLKE--IPIKGPSRPYESMFY 207
Query: 225 LPPF 228
P F
Sbjct: 208 DPNF 211
Score = 41.6 bits (96), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 40/68 (58%), Gaps = 1/68 (1%)
Query: 352 TIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATEGVVMVSGTSDQMRAAQ 411
T +V IP + G+ ++ IR+ SGA++VV +P +E ++ +SG+ Q++ AQ
Sbjct: 270 TTQVTIPNELGGTIIGKGGERINRIREESGAHIVVEPQQPN-SERIITISGSHAQIQTAQ 328
Query: 412 SLIHAFIL 419
L+ +I+
Sbjct: 329 YLLQQWIV 336
>gi|432857624|ref|XP_004068722.1| PREDICTED: poly(rC)-binding protein 2-like [Oryzias latipes]
Length = 317
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 89/383 (23%), Positives = 155/383 (40%), Gaps = 107/383 (27%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMRH 109
+ +LL H +VGS+IGK G V+ + E+GA I I++ + ERI+ ++
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISE--GNCPERIITLAG-------- 63
Query: 110 SPAQDAVMRVHSRIAEIGFEPGQA------------VVARLLVHSQQIGCLLGRGGHIVS 157
A+ + S I E E + V R++V + Q G L+G+GG +
Sbjct: 64 --PTTAIFKAFSMIIEKLEEDISSSMTNSTATSKPPVTLRIVVPASQCGSLIGKGGCKIK 121
Query: 158 EMRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKRPG 217
E+R +TGA ++V D P + + + + G S+ + + I + E+
Sbjct: 122 EIRESTGAQVQV-AGDMLP---NSTERAITIAGTPQSIIECVKQICVVMLES-------- 169
Query: 218 PNNGHSYLPPFPEMPPPPFRPRHNPASP----GSYPSPVGPFHSMDRGMGPSQPFDHQAA 273
P G + P+RP+ + SP G V H++ + P HQ A
Sbjct: 170 PPKGVTI----------PYRPKPS-GSPVIFAGGQAYAVQGQHAIPQ---PDLTKLHQLA 215
Query: 274 FSHGMDPMVPPNSDRIPFPYGSERPGHGPTFDRPPSPRSWTPQGVGGGDPRGFDASSGFT 333
PFP PS + +T G DAS+
Sbjct: 216 MQQS------------PFPIA-------------PSNQGFT----------GIDASA--- 237
Query: 334 PRNRPVESGNHAAILTSTTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGA 393
++ +H E+ IP + + G + ++ IRQ+SGA + + +P G+
Sbjct: 238 ------QTSSH---------EMTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVDGS 282
Query: 394 TEGVVMVSGTSDQMRAAQSLIHA 416
T+ V ++G+ + A+ LI+A
Sbjct: 283 TDRQVTITGSPASISLAEYLINA 305
>gi|194222666|ref|XP_001498933.2| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2-like
isoform 1 [Equus caballus]
Length = 620
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/193 (30%), Positives = 95/193 (49%), Gaps = 16/193 (8%)
Query: 10 PAAEPFHQRGYAPGYHSRGYSSGPGHETVGGRNRMFYEEEVVFKLLCHLDKVGSLIGKGG 69
P A P+H GY S Y P H+ + Y E+ + L VG++IGK G
Sbjct: 412 PPAPPYHPFATHSGYFSSLY---PPHQFSPFPHHHSYPEQEIVNLFIPTQAVGAIIGKKG 468
Query: 70 SIVRTFQNETGASIKIADIL-PDSEERIVVISARENSEMRHSPAQDAVMRVHSRIAEIG- 127
+ ++ GASIKIA PD ER+V+I+ ++ + A R+ ++ E
Sbjct: 469 AHIKQLARFAGASIKIAPAEGPDVSERMVIITGPPEAQFK------AQGRIFGKLKEENF 522
Query: 128 FEPGQAVV--ARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAPRCGSPHDEI 185
F P + V A + V S G ++G+GG V+E++ T A + + P+DQ P + I
Sbjct: 523 FNPKEEVKLEAHIRVPSSTAGRVIGKGGKTVNELQNLTSAEV-IVPRDQTP--DENEEVI 579
Query: 186 VQVIGNYHSVQDA 198
V++IG++ + Q A
Sbjct: 580 VRIIGHFFASQTA 592
>gi|357137683|ref|XP_003570429.1| PREDICTED: RNA-binding protein Nova-1-like [Brachypodium
distachyon]
Length = 349
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 83/165 (50%), Gaps = 14/165 (8%)
Query: 52 FKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIA---DILPDSEERIVVISARENSEMR 108
+ L G +IGKGGS + FQ+++GA I+++ + P + +RI+++S + ++
Sbjct: 48 LRFLVSNTAAGCIIGKGGSTINDFQSQSGARIQLSRSHEFFPGTNDRIIMVSGLFDEVIK 107
Query: 109 HSPAQDAVMRVHSRIAEIGFEPGQAVVA---RLLVHSQQIGCLLGRGGHIVSEMRRATGA 165
A+ V ++ G E +A RL+V + G ++G+GG + + A
Sbjct: 108 ------AMELVLEKLLAEGEEFNEAEARPKFRLVVPNSSCGGIIGKGGATIKAFIEDSHA 161
Query: 166 SIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETI 210
I++ P+D HD +V + G +++ A++ I S+L E +
Sbjct: 162 GIKISPQDN--NFVGLHDRLVTITGPFNNQMRAIYLILSKLSEDV 204
>gi|390479167|ref|XP_002762342.2| PREDICTED: RNA-binding protein Nova-2-like [Callithrix jacchus]
Length = 608
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 82/189 (43%), Gaps = 37/189 (19%)
Query: 44 MFYEEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIA---DILPDSEERIVVIS 100
+ E E K+L GS+IGKGG + Q ETGA+IK++ D P + ER+ ++
Sbjct: 124 LLEEGEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQ 183
Query: 101 ARENSEMRHSPAQDAVMRVHSRIAE---------------------IGFEPGQAVVARLL 139
+A+ VHS IAE P +A A+L+
Sbjct: 184 G----------TAEALNAVHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQAKLI 233
Query: 140 VHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDAL 199
V + G ++G+GG V + +GA +++ Q P + + +V V G V A+
Sbjct: 234 VPNSTAGLIIGKGGATVKAVMEQSGAWVQL---SQKPEGINLQERVVTVSGEPEQVHKAV 290
Query: 200 FHITSRLRE 208
I +++E
Sbjct: 291 SAIVQKVQE 299
>gi|356495760|ref|XP_003516741.1| PREDICTED: uncharacterized protein LOC100800173 [Glycine max]
Length = 793
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 88/201 (43%), Gaps = 20/201 (9%)
Query: 24 YHSRGYSSGPGHETVGGRNRMFYEEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASI 83
Y+ + SSG T G +E K+ +KVG LIGK G +R Q +GA I
Sbjct: 179 YNKQDTSSGQKQPTSG-------DEITTRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKI 231
Query: 84 KI---ADILPDSEERIVVISARENSEMRHSPAQDAVMRVHS-----RIAEIGFEPGQAVV 135
+I AD P R V + S + +AV+ + G P QA V
Sbjct: 232 QITRDADADPLCATRSVELIGSLESIDKAEKLMNAVIAEADAGGSPSLVARGLSPAQATV 291
Query: 136 A----RLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAPRCGSPHDEIVQVIGN 191
++ V ++++G ++GRGG + ++ +GA I++ P+ P + VQV G+
Sbjct: 292 GSEQIQIQVPNEKVGLIIGRGGETIKSLQTKSGARIQLIPQ-HLPEGDDSKERTVQVTGD 350
Query: 192 YHSVQDALFHITSRLRETIFP 212
++ A I + + + P
Sbjct: 351 KRQIEIAQELIKEVMNQPVRP 371
>gi|410900550|ref|XP_003963759.1| PREDICTED: poly(rC)-binding protein 3-like [Takifugu rubripes]
Length = 434
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 80/172 (46%), Gaps = 28/172 (16%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMRH 109
+ +LL H +VGS+IGK G V+ + E+GA I I++ S ERIV I+
Sbjct: 17 LTLRLLMHGKEVGSIIGKKGETVKKMREESGARINISE--GSSPERIVTITG-------- 66
Query: 110 SPAQDAVMRVHSRIAEIGFEPGQA------------VVARLLVHSQQIGCLLGRGGHIVS 157
A +A+ R + IA+ E A V RL+ Q G L+G+GG +
Sbjct: 67 --ATEAIFRAFAMIAQKFEEDISAAMSNSSVTSKPPVTLRLVFPGSQCGSLIGKGGSKIK 124
Query: 158 EMRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRET 209
E+R TGA ++V D P + V + G ++ + HI S + E+
Sbjct: 125 EIRETTGAQVQV-AGDMLPDS---TERAVTISGTPQAITQCVRHICSVMLES 172
Score = 38.9 bits (89), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 36/65 (55%)
Query: 354 EVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATEGVVMVSGTSDQMRAAQSL 413
E+ IP ++ + G S ++ IRQ+SGA++ + G+ V ++G+ + AQ L
Sbjct: 252 EMAIPNDFIGCIIGRQGSKINEIRQVSGAHIKIASTTDGSAVRQVTITGSPASINVAQYL 311
Query: 414 IHAFI 418
I+A +
Sbjct: 312 INASL 316
>gi|324505572|gb|ADY42393.1| Heterogeneous nuclear ribonucleoprotein K [Ascaris suum]
Length = 415
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 100/217 (46%), Gaps = 29/217 (13%)
Query: 19 GYAPGYHSRGYSSGPGHETVGGRNRMFYEEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNE 78
GYA G R + G G+ YE +LL G++IGKGG ++ + E
Sbjct: 84 GYATGKRQR--ADGYQEALAAGK----YE----LRLLVPSRGAGAVIGKGGESIKRLRAE 133
Query: 79 TGASIKIADILPDSE--ERIVVISARENSEMRHS----PAQDAVMRVHSRIAEIGFEPGQ 132
A++ I PDS+ ERIV I A ++ +R P D ++ E G G+
Sbjct: 134 CDATLTI----PDSQTPERIVTIVAEIDNVIRCVNEIIPRLDECLKTRDSDDE-GSARGE 188
Query: 133 AVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNY 192
+ + RLLVH G ++GRGG+ + E+R T ++V+ + C + ++Q+IG
Sbjct: 189 SEL-RLLVHQSHAGAIIGRGGYRIKELREETSTQLKVYSQC----CPQSTERVIQIIGVP 243
Query: 193 HSVQDALFHITSRLRETIFPMKRPG-PNNGHSYLPPF 228
+ + I + L+E P+K P P Y P F
Sbjct: 244 EKIIACVILIINMLKE--IPIKGPSRPYESMFYDPNF 278
Score = 38.9 bits (89), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 38/67 (56%), Gaps = 1/67 (1%)
Query: 352 TIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATEGVVMVSGTSDQMRAAQ 411
T +V IP + G+ ++ IR+ SGA++VV +P +E ++ +SG+ Q++ AQ
Sbjct: 337 TTQVTIPNELGGTIIGKGGERINRIREESGAHIVVEPQQPN-SERIITISGSHAQIQTAQ 395
Query: 412 SLIHAFI 418
L+ +
Sbjct: 396 YLLQQCV 402
>gi|224079280|ref|XP_002305814.1| predicted protein [Populus trichocarpa]
gi|222848778|gb|EEE86325.1| predicted protein [Populus trichocarpa]
Length = 270
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 52/74 (70%), Gaps = 4/74 (5%)
Query: 114 DAVMRVHSRIAEIGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKD 173
+A++++ ++ +E E G ++ RLLV S ++GC+LG+G ++EMRR A IRV+PK+
Sbjct: 65 EAILQLQNKTSEFS-EKG--MITRLLVPSSKVGCILGQGSQDINEMRRLQ-AEIRVYPKN 120
Query: 174 QAPRCGSPHDEIVQ 187
+ P+C S +E+VQ
Sbjct: 121 EKPKCASEDEELVQ 134
>gi|393905262|gb|EJD73914.1| hypothetical protein LOAG_18700 [Loa loa]
Length = 228
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 88/184 (47%), Gaps = 29/184 (15%)
Query: 60 KVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSE-----MRHSPAQD 114
+VGS+IGK G ++ ++++GA I I+D ERIV I+ + M + Q
Sbjct: 12 EVGSIIGKRGDHIKLIRDQSGAKINISD--GSCPERIVTITGSTGTINKAFIMICAKLQQ 69
Query: 115 AVMRVHSRIAEIGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQ 174
+ + + I P + RL+V + Q GC++G+GG + E+R ATGASI+V +
Sbjct: 70 DLQALPNSI------PKPPITMRLIVPATQCGCIIGKGGSKIKEIREATGASIQV-ASEM 122
Query: 175 APRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKRPGPNNGHSYLPPFPEMPPP 234
P S + V + G+ S+ D + +I L E P G++ P P P
Sbjct: 123 LP---SSTERAVTISGSADSIVDCMRNICQILLE--------APAKGNT----LPYRPKP 167
Query: 235 PFRP 238
F P
Sbjct: 168 TFNP 171
Score = 44.7 bits (104), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIA-DILPDSEERIVVISARENS 105
+ +L+ + G +IGKGGS ++ + TGASI++A ++LP S ER V IS +S
Sbjct: 83 ITMRLIVPATQCGCIIGKGGSKIKEIREATGASIQVASEMLPSSTERAVTISGSADS 139
>gi|414867455|tpg|DAA46012.1| TPA: hypothetical protein ZEAMMB73_887859 [Zea mays]
Length = 455
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 77/139 (55%), Gaps = 16/139 (11%)
Query: 52 FKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSE-ERIVVISARENSEMRHS 110
++LC + +GS+IGK G+ VR + +TGA IK+ +I D+ ER++++S+ E S
Sbjct: 214 IRILCASELIGSVIGKSGANVRRVEQQTGARIKVQEIDKDASGERLIIVSSNEIPTEPIS 273
Query: 111 PAQDAVMRVHSRI--AEI------GFEPGQAVVA-------RLLVHSQQIGCLLGRGGHI 155
P +A++ +H ++ AE+ G + V+ R+L S+ IG ++G+ G
Sbjct: 274 PTIEALILLHDKVLMAEVKRNHGGGMRCDELPVSENGDKSIRILCASELIGSVIGKSGAN 333
Query: 156 VSEMRRATGASIRVFPKDQ 174
V + + TGA I+V D+
Sbjct: 334 VRRVEQQTGARIKVQEIDK 352
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 48/74 (64%), Gaps = 1/74 (1%)
Query: 52 FKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSE-ERIVVISARENSEMRHS 110
++LC + +GS+IGK G+ VR + +TGA IK+ +I D+ ER++++S+ E S
Sbjct: 314 IRILCASELIGSVIGKSGANVRRVEQQTGARIKVQEIDKDASGERLIIVSSNEIPTEPIS 373
Query: 111 PAQDAVMRVHSRIA 124
P +A++ +H ++A
Sbjct: 374 PTIEALILLHDKVA 387
>gi|291221774|ref|XP_002730893.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K-like
[Saccoglossus kowalevskii]
Length = 437
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 85/170 (50%), Gaps = 16/170 (9%)
Query: 49 EVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMR 108
+V ++L G++IGKGG+ + + + A++ + D ERI+ ++ N E
Sbjct: 47 KVDLRILLQSKNAGAIIGKGGNNIHRLRTQYNATVTVPDC--SGPERILTVTT--NQETA 102
Query: 109 HSPAQDA--VMRVHSRIAEIGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGAS 166
S D V+ + + ++ F+ R+LVH Q G ++GR G + E+R TGA+
Sbjct: 103 LSCLLDVIPVLEEYQQYKDLDFD----CEMRMLVHQSQAGAIIGRAGFKIKELREQTGAN 158
Query: 167 IRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKRP 216
I+V+ + C + + +VQ+ G+ V + + I L +T P+K P
Sbjct: 159 IKVY----SEVCPNSTERVVQMNGSPEVVINCMRMILDVLNQT--PIKGP 202
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 40/65 (61%)
Query: 351 TTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATEGVVMVSGTSDQMRAA 410
TT +V IP+ + G+ S + IR+ SGA + +++P PG+ + ++ + GT +Q++ A
Sbjct: 355 TTTQVTIPKDLAGSIIGKGGSRIGQIREDSGALIKIDEPLPGSNDRIITIKGTPEQIQNA 414
Query: 411 QSLIH 415
Q L+
Sbjct: 415 QYLLQ 419
Score = 40.4 bits (93), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 28/42 (66%)
Query: 59 DKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVIS 100
D GS+IGKGGS + + ++GA IKI + LP S +RI+ I
Sbjct: 364 DLAGSIIGKGGSRIGQIREDSGALIKIDEPLPGSNDRIITIK 405
>gi|296085941|emb|CBI31382.3| unnamed protein product [Vitis vinifera]
Length = 357
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 86/169 (50%), Gaps = 10/169 (5%)
Query: 45 FYEEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIA---DILPDSEERIVVISA 101
F E+ + L GS+IGKGGS + FQ+++GA I+++ + P + +RI++IS
Sbjct: 77 FMEKSTYIRFLVSNAAAGSVIGKGGSTINDFQSQSGARIQLSRNHEFFPGTSDRIIMISG 136
Query: 102 RENSEMRHSPAQDAVM-RVHSRI-AEIGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSEM 159
N ++ A + ++ ++ S + E G E RL+V + G ++G+GG +
Sbjct: 137 ATNEIIK---AMELILAKLLSEMHTEDGDEADPRSKVRLIVPNSSCGGIIGKGGSTIKSF 193
Query: 160 RRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRE 208
+ ASI++ P+D D +V ++G+ A+ I S+L E
Sbjct: 194 IEDSQASIKISPQDN--NYLGLTDRLVTLMGSLEEQMRAIDLILSKLTE 240
>gi|195042483|ref|XP_001991440.1| GH12054 [Drosophila grimshawi]
gi|193901198|gb|EDW00065.1| GH12054 [Drosophila grimshawi]
Length = 611
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 78/159 (49%), Gaps = 14/159 (8%)
Query: 59 DKVGSLIGKGGSIVRTFQNETGASIKIADI-----LPDSEERIVVISARENSEMRHSPAQ 113
+ VG++IG GS +R+ + AS+KIA + L ER V I + +
Sbjct: 312 NAVGAIIGTKGSHIRSIMRFSSASLKIAPLDADKPLDQQTERKVTIVGTPEGQWK----- 366
Query: 114 DAVMRVHSRIAEIGFEPGQA---VVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVF 170
A + ++ E GF G + LLV S Q+G ++G+GG V E++R TG+ I++
Sbjct: 367 -AQYMIFEKMREEGFMCGTDDVRLTVELLVASSQVGRIIGKGGQNVRELQRVTGSVIKLP 425
Query: 171 PKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRET 209
AP G + V +IG ++SVQ A I + + T
Sbjct: 426 EHALAPPSGGDEETPVHIIGQFYSVQSAQRRIRAMMLST 464
Score = 41.6 bits (96), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 31/161 (19%), Positives = 73/161 (45%), Gaps = 12/161 (7%)
Query: 52 FKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKI--ADILPDSEERIVVISARENSEMRH 109
++L + VG++IG+ GS +RT ++ A + + + + E+ I + +N
Sbjct: 87 LRILVQSEMVGAIIGRQGSTIRTITQQSRARVDVHRKENVGSLEKSITIYGNPDN----- 141
Query: 110 SPAQDAVMRVHSRIAEIGFEPGQA-VVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIR 168
+A R+ + + + + ++L H+ IG ++G+ G+ + + + T I
Sbjct: 142 --CTNACKRILEVMQQEALSTNKGEICLKILAHNNLIGRIIGKSGNTIKRIMQDTDTKIT 199
Query: 169 VFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRET 209
V + + I+ V G ++ A I+++LR++
Sbjct: 200 VSSINDINSYN--LERIITVKGLIENMSRAENQISTKLRQS 238
>gi|356538917|ref|XP_003537947.1| PREDICTED: uncharacterized protein LOC100786134 [Glycine max]
Length = 794
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 87/201 (43%), Gaps = 20/201 (9%)
Query: 24 YHSRGYSSGPGHETVGGRNRMFYEEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASI 83
Y+ + SSG T G +E K+ +KVG LIGK G +R Q +GA I
Sbjct: 178 YNKQDTSSGQKQPTSG-------DEITTRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKI 230
Query: 84 KI---ADILPDSEERIVVISARENSEMRHSPAQDAVMRVHS-----RIAEIGFEPGQAVV 135
+I AD P R V + S + +AV+ + G P QA V
Sbjct: 231 QITRDADADPLCATRSVELIGSLESIDKAEKLMNAVIAEADAGGSPSLVARGLSPAQATV 290
Query: 136 A----RLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAPRCGSPHDEIVQVIGN 191
++ V ++++G ++GR G + ++ +GA I++ P+ P + VQV G+
Sbjct: 291 GSEQIQIQVPNEKVGLIIGRSGETIKSLQTKSGARIQLIPQ-HLPEGDDSKERTVQVTGD 349
Query: 192 YHSVQDALFHITSRLRETIFP 212
+Q A I + + + P
Sbjct: 350 KRQIQIAQELIKEVMNQPVRP 370
>gi|441656325|ref|XP_004093124.1| PREDICTED: LOW QUALITY PROTEIN: RNA-binding protein Nova-2
[Nomascus leucogenys]
Length = 500
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 82/189 (43%), Gaps = 37/189 (19%)
Query: 44 MFYEEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIA---DILPDSEERIVVIS 100
+ E E K+L GS+IGKGG + Q ETGA+IK++ D P + ER+ ++
Sbjct: 61 LLEEGEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQ 120
Query: 101 ARENSEMRHSPAQDAVMRVHSRIAE---------------------IGFEPGQAVVARLL 139
+A+ VHS IAE P +A A+L+
Sbjct: 121 G----------TAEALNAVHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQAKLI 170
Query: 140 VHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDAL 199
V + G ++G+GG V + +GA +++ Q P + + +V V G V A+
Sbjct: 171 VPNSTAGLIIGKGGATVKAVMEQSGAWVQL---SQKPEGINLQERVVTVSGEPEQVHKAV 227
Query: 200 FHITSRLRE 208
I +++E
Sbjct: 228 SAIVQKVQE 236
>gi|326510613|dbj|BAJ87523.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326528939|dbj|BAJ97491.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 360
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 101/216 (46%), Gaps = 26/216 (12%)
Query: 52 FKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIA---DILPDSEERIVVISARENSEMR 108
+ L G +IGKGGS + FQ+++GA I+++ + P + +RI+++S + ++
Sbjct: 51 LRFLVSNTAAGCIIGKGGSTINDFQSQSGARIQLSRSHEFFPGTNDRIIMVSGLFDEVVK 110
Query: 109 HSPAQDAVMRVHSRIAEIGFEPGQAVVA---RLLVHSQQIGCLLGRGGHIVSEMRRATGA 165
A+ V ++ G E +A RL+V + G ++G+GG + + A
Sbjct: 111 ------AMELVLEKLLSEGEESNEAEARPKFRLVVPNSSCGGIIGKGGATIKSFIEDSHA 164
Query: 166 SIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETI-FP--MKRPGPNNGH 222
I++ P+D HD +V + G +S A+ I S+L E + +P + P P G
Sbjct: 165 GIKISPQDN--NFVGLHDRLVTITGPLNSQMRAIHLILSKLSEDVHYPPNLSSPFPYAGL 222
Query: 223 SYLPPFPE-------MPPPPFRPRHNPASPGSYPSP 251
+ P +P +PP P+ N P Y +P
Sbjct: 223 GF-PSYPAAVPVGYMIPPVPYNNTVN-YGPNGYAAP 256
>gi|332856422|ref|XP_524310.3| PREDICTED: RNA-binding protein Nova-2 [Pan troglodytes]
Length = 607
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 81/186 (43%), Gaps = 37/186 (19%)
Query: 47 EEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIA---DILPDSEERIVVISARE 103
E E K+L GS+IGKGG + Q ETGA+IK++ D P + ER+ ++
Sbjct: 145 EGEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQG-- 202
Query: 104 NSEMRHSPAQDAVMRVHSRIAE---------------------IGFEPGQAVVARLLVHS 142
+A+ VHS IAE P +A A+L+V +
Sbjct: 203 --------TAEALNAVHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVPN 254
Query: 143 QQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHI 202
G ++G+GG V + +GA +++ Q P + + +V V G V A+ I
Sbjct: 255 STAGLIIGKGGATVKAVMEQSGAWVQL---SQKPEGINLQERVVTVSGEPEQVHKAVSAI 311
Query: 203 TSRLRE 208
+++E
Sbjct: 312 VQKVQE 317
Score = 38.5 bits (88), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 19/69 (27%), Positives = 38/69 (55%), Gaps = 7/69 (10%)
Query: 353 IEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPK---PGATEGVVMVSGTSDQMRA 409
++V+IP + G+ + +++ +GA + ++ K PG TE V +V GT++ + A
Sbjct: 150 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEALNA 209
Query: 410 AQSLIHAFI 418
+H+FI
Sbjct: 210 ----VHSFI 214
>gi|133778726|gb|AAI34153.1| LOC557028 protein [Danio rerio]
Length = 302
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 57/187 (30%), Positives = 95/187 (50%), Gaps = 20/187 (10%)
Query: 47 EEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIAD-ILPDSEERIVVISARENS 105
E+EVV+ L VG+LIGK G ++ + GASIKIA PD ER+V+I+ +
Sbjct: 127 EQEVVY-LFIPTPAVGALIGKKGQHIKELAHFAGASIKIAAPESPDEPERMVIITGPPEA 185
Query: 106 EMRHSPAQDAVMRVHSRIAEIGFEPGQAVV---ARLLVHSQQIGCLLGRGGHIVSEMRRA 162
+ + A R++ ++ E F + V A + V S G ++G+GG V+E++
Sbjct: 186 QFK------AQGRIYGKLKEENFFTAKEEVKLEAHIKVPSTAAGRVIGKGGKTVNELQNL 239
Query: 163 TGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKRPGPNNGH 222
T A + + P+DQ P D V++IG++ + Q A ++RE + +K+ H
Sbjct: 240 TSAEV-IVPRDQTP--DENDDVFVKIIGHFFASQTA----QRKIREIVQQVKQ--QERKH 290
Query: 223 SYLPPFP 229
+P P
Sbjct: 291 QQMPQTP 297
>gi|334188353|ref|NP_001190526.1| RNA-binding KH domain-containing protein [Arabidopsis thaliana]
gi|332008916|gb|AED96299.1| RNA-binding KH domain-containing protein [Arabidopsis thaliana]
Length = 198
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 42/124 (33%), Positives = 63/124 (50%), Gaps = 24/124 (19%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISA--RENSEM 107
+++LCH K G +IGK G+I+++ + TGA I + +++P ERI+ IS R + +
Sbjct: 68 TTYRILCHDAKAGGVIGKSGTIIKSIRQHTGAWINVHELVPGDAERIIEISDNRRRDPDG 127
Query: 108 R---HSPAQDAVMRVHSRIAEIGFEPG-------------------QAVVARLLVHSQQI 145
R SPAQ+A+ VH RI E + G VV RL+V +
Sbjct: 128 RMPSFSPAQEALFSVHDRILESEAQFGYGGPPPEEEEDYGGVRPGGGRVVTRLVVSRMHV 187
Query: 146 GCLL 149
GCLL
Sbjct: 188 GCLL 191
>gi|281366597|ref|NP_001163493.1| mushroom-body expressed, isoform E [Drosophila melanogaster]
gi|386771584|ref|NP_001246873.1| mushroom-body expressed, isoform F [Drosophila melanogaster]
gi|134085557|gb|ABO52837.1| IP17311p [Drosophila melanogaster]
gi|272455272|gb|ACZ94764.1| mushroom-body expressed, isoform E [Drosophila melanogaster]
gi|383292063|gb|AFH04544.1| mushroom-body expressed, isoform F [Drosophila melanogaster]
Length = 557
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 78/160 (48%), Gaps = 9/160 (5%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMRH 109
+ +L+ +VGS+IGK G IV F+ E+GA I I+D ERIV +S N+
Sbjct: 24 LTIRLIMQGKEVGSIIGKKGEIVNRFREESGAKINISD--GSCPERIVTVSGTTNAIF-- 79
Query: 110 SPAQDAVMRVHSRIAEIGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRV 169
A + + ++G + RL+V + Q G L+G+ G + E+R+ TG SI+V
Sbjct: 80 -SAFTLITKKFEEFNDVGKVGKTQIPIRLIVPASQCGSLIGKSGSKIKEIRQTTGCSIQV 138
Query: 170 FPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRET 209
+ P + + V + G+ + ++ I + E+
Sbjct: 139 -ASEMLP---NSTERAVTLSGSAEQITQCIYQICLVMLES 174
Score = 43.1 bits (100), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Query: 47 EEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIA-DILPDSEERIVVIS 100
+ ++ +L+ + GSLIGK GS ++ + TG SI++A ++LP+S ER V +S
Sbjct: 100 KTQIPIRLIVPASQCGSLIGKSGSKIKEIRQTTGCSIQVASEMLPNSTERAVTLS 154
Score = 42.4 bits (98), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 38/66 (57%), Gaps = 2/66 (3%)
Query: 137 RLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQ 196
+ V + IGC++G+GG ++E+R+ +GA IR+ ++ R G D + + GN SV
Sbjct: 289 EMTVSNDLIGCIIGKGGTKIAEIRQISGAMIRISNCEE--REGGNTDRTITISGNPDSVA 346
Query: 197 DALFHI 202
A + I
Sbjct: 347 LAQYLI 352
Score = 41.2 bits (95), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 40/80 (50%), Gaps = 7/80 (8%)
Query: 129 EPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAPRCGSPHDEIVQV 188
+P + RL++ +++G ++G+ G IV+ R +GA I + GS + IV V
Sbjct: 19 DPSVTLTIRLIMQGKEVGSIIGKKGEIVNRFREESGAKINISD-------GSCPERIVTV 71
Query: 189 IGNYHSVQDALFHITSRLRE 208
G +++ A IT + E
Sbjct: 72 SGTTNAIFSAFTLITKKFEE 91
>gi|449447567|ref|XP_004141539.1| PREDICTED: uncharacterized protein LOC101203078 [Cucumis sativus]
gi|449481514|ref|XP_004156205.1| PREDICTED: uncharacterized LOC101203078 [Cucumis sativus]
Length = 787
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 89/198 (44%), Gaps = 27/198 (13%)
Query: 48 EEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKI---ADILPDSEER-IVVISARE 103
E +K+ KVG LIGK G +R Q +GA I+I A+ P+ R + +I E
Sbjct: 185 ETTTYKMEVPNSKVGVLIGKAGDTIRYLQYNSGAKIQIMRDAEADPNRLTRPVEIIGTSE 244
Query: 104 NSEMRHSPAQDAVMRVHSRIAEIGFEPGQAVVAR---------------LLVHSQQIGCL 148
N + A +++ IAE +++AR L V ++++G +
Sbjct: 245 N-------IKKAEELINAVIAEADAGGSPSLIARGLTSSHSIATAEQIQLQVPNEKVGLI 297
Query: 149 LGRGGHIVSEMRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRE 208
+GRGG + ++ +GA I++ P++ P + ++V G+ ++ A I + +
Sbjct: 298 IGRGGETIKSLQTRSGARIQLIPQN-LPEGDESKERTIRVTGDKKQIEIATDMIKEVMNQ 356
Query: 209 TIFPMKRPGPNNGHSYLP 226
T+ P N +Y P
Sbjct: 357 TVRPSPHSTGFNQQAYRP 374
>gi|48716278|dbj|BAD22893.1| KH domain-containing protein NOVA-like [Oryza sativa Japonica
Group]
gi|48716520|dbj|BAD23125.1| KH domain-containing protein NOVA-like [Oryza sativa Japonica
Group]
Length = 343
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 92/190 (48%), Gaps = 18/190 (9%)
Query: 52 FKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIA---DILPDSEERIVVISARENSEMR 108
+ L G +IGKGGS + FQ+++GA I+++ + P + +RI+++S + ++
Sbjct: 43 LRFLVSNTAAGCIIGKGGSTINEFQSQSGARIQLSRSHEFFPGTNDRIIMVSGLFDEVIK 102
Query: 109 HSPAQDAVMRVHSRIAEIGFEPGQAVV---ARLLVHSQQIGCLLGRGGHIVSEMRRATGA 165
A+ + ++ G E +A RL+V + G ++G+GG + + A
Sbjct: 103 ------AMELILEKLLAEGEESNEAEARPKVRLVVPNSSCGGIIGKGGSTIKSFIEDSHA 156
Query: 166 SIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETI-FP--MKRPGPNNGH 222
I++ P+D HD +V V G A++ I S+L E + +P + P P G
Sbjct: 157 GIKISPQDN--NFVGLHDRLVTVTGPLDHQMRAIYLILSKLSEDVHYPPNLSSPFPYAGL 214
Query: 223 SYLPPFPEMP 232
+ P +P +P
Sbjct: 215 GF-PSYPGVP 223
>gi|195439130|ref|XP_002067484.1| GK16164 [Drosophila willistoni]
gi|194163569|gb|EDW78470.1| GK16164 [Drosophila willistoni]
Length = 587
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 78/159 (49%), Gaps = 14/159 (8%)
Query: 59 DKVGSLIGKGGSIVRTFQNETGASIKIADI-----LPDSEERIVVISARENSEMRHSPAQ 113
+ VG++IG GS +R+ + AS+KIA I L ER V I + +
Sbjct: 312 NAVGAIIGTKGSHIRSIMRFSNASLKIAPIDADKPLDQQTERKVTIVGTPEGQWK----- 366
Query: 114 DAVMRVHSRIAEIGFEPGQA---VVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVF 170
A + ++ E GF G + LLV S Q+G ++G+GG V E++R TG+ I++
Sbjct: 367 -AQYMIFEKMREEGFMCGTDDVRLTIELLVASSQVGRIIGKGGQNVRELQRVTGSVIKLP 425
Query: 171 PKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRET 209
AP G + V +IG ++SVQ A I + + T
Sbjct: 426 EHALAPPSGGDEETPVHIIGPFYSVQSAQRRIRAMMLST 464
Score = 42.0 bits (97), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 34/160 (21%), Positives = 75/160 (46%), Gaps = 10/160 (6%)
Query: 52 FKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKI--ADILPDSEERIVVISARENSEMRH 109
++L + VG++IG+ GS +RT ++ A + + + + E+ I + EN
Sbjct: 87 LRILVQSEMVGAIIGRQGSTIRTITQQSRARVDVHRKENVGSLEKSITIYGNPENC---- 142
Query: 110 SPAQDAVMRVHSRIAEIGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRV 169
+ A ++ V + A G+ + ++L H+ IG ++G+ G+ + + + T I V
Sbjct: 143 TNACKRILEVMQQEAN-STNKGE-ICLKILAHNNLIGRIIGKSGNTIKRIMQDTDTKITV 200
Query: 170 FPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRET 209
+ + I+ V G ++ A I+++LR++
Sbjct: 201 SSINDINSFN--LERIITVKGLIENMSRAENQISTKLRQS 238
>gi|388509486|gb|AFK42809.1| unknown [Lotus japonicus]
Length = 134
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 44/112 (39%), Positives = 64/112 (57%), Gaps = 3/112 (2%)
Query: 311 RSWTPQGV-GGGDPRGFDASSGFTPRNRPVESGNHAAILT--STTIEVVIPQLYMAHVYG 367
+ W PQG+ GG G +G PR G + I+T S T+EVV+P+ + +YG
Sbjct: 17 KPWGPQGILEGGGHMGLPDFAGGPPRRILGFGGGNQPIITHTSATVEVVVPRAVVPEIYG 76
Query: 368 ENNSNLSHIRQISGANVVVNDPKPGATEGVVMVSGTSDQMRAAQSLIHAFIL 419
E+ L I QI A +++ DPKPGA E +++SGT +Q AQS I AF++
Sbjct: 77 EDGECLRQILQIFDAKIMITDPKPGAVETKIIISGTPEQTHTAQSFIQAFVM 128
>gi|147834901|emb|CAN63963.1| hypothetical protein VITISV_030144 [Vitis vinifera]
Length = 739
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 73/142 (51%), Gaps = 26/142 (18%)
Query: 61 VGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMRHSPAQDAVMRVH 120
+G +IG+GGS +++ + +GA +++ D D +E ++ +++ E+ + S A +AV+ +
Sbjct: 616 IGRVIGRGGSSIKSVREASGAHVEVDDTKADRDECLITVTSTESVDDLKSMAVEAVLLLR 675
Query: 121 SRIAEIGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAPRCGS 180
++I + E V RLL T A +R+ K + P+C
Sbjct: 676 AKIND---EDDDIVTIRLL----------------------RTRADVRI-SKSERPKCAD 709
Query: 181 PHDEIVQVIGNYHSVQDALFHI 202
+DE+++V+G SV+DAL I
Sbjct: 710 ANDELIEVVGEIGSVRDALVQI 731
>gi|402906002|ref|XP_003915796.1| PREDICTED: RNA-binding protein Nova-2 [Papio anubis]
Length = 618
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 82/189 (43%), Gaps = 37/189 (19%)
Query: 44 MFYEEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIA---DILPDSEERIVVIS 100
+ E E K+L GS+IGKGG + Q ETGA+IK++ D P + ER+ ++
Sbjct: 153 LLEEGEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQ 212
Query: 101 ARENSEMRHSPAQDAVMRVHSRIAE---------------------IGFEPGQAVVARLL 139
+A+ VHS IAE P +A A+L+
Sbjct: 213 G----------TAEALNAVHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQAKLI 262
Query: 140 VHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDAL 199
V + G ++G+GG V + +GA +++ Q P + + +V V G V A+
Sbjct: 263 VPNSTAGLIIGKGGATVKAVMEQSGAWVQL---SQKPEGINLQERVVTVSGEPEQVHKAV 319
Query: 200 FHITSRLRE 208
I +++E
Sbjct: 320 SAIVQKVQE 328
>gi|194889982|ref|XP_001977205.1| GG18899 [Drosophila erecta]
gi|190648854|gb|EDV46132.1| GG18899 [Drosophila erecta]
Length = 568
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 78/159 (49%), Gaps = 14/159 (8%)
Query: 59 DKVGSLIGKGGSIVRTFQNETGASIKIADI-----LPDSEERIVVISARENSEMRHSPAQ 113
+ VG++IG GS +R+ + AS+KIA + L ER V I + +
Sbjct: 306 NAVGAIIGTKGSHIRSIMRFSNASLKIAPLDADKPLDQQTERKVTIVGTPEGQWK----- 360
Query: 114 DAVMRVHSRIAEIGFEPGQ---AVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVF 170
A + ++ E GF G + LLV S Q+G ++G+GG V E++R TG+ I++
Sbjct: 361 -AQFMIFEKMREEGFMCGTDDVRLTVELLVASSQVGRIIGKGGQNVRELQRVTGSVIKLP 419
Query: 171 PKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRET 209
AP G + V +IG ++SVQ A I + + T
Sbjct: 420 EHALAPPSGGDEETPVHIIGPFYSVQSAQRRIRAMMLST 458
Score = 43.1 bits (100), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 32/161 (19%), Positives = 73/161 (45%), Gaps = 12/161 (7%)
Query: 52 FKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKI--ADILPDSEERIVVISARENSEMRH 109
++L + VG++IG+ GS +RT ++ A + + + + E+ I + EN
Sbjct: 81 LRILVQSEMVGAIIGRQGSTIRTITQQSRARVDVHRKENVGSLEKSITIYGNPEN----- 135
Query: 110 SPAQDAVMRVHSRIAEIGFEPGQA-VVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIR 168
+A R+ + + + + ++L H+ IG ++G+ G+ + + + T I
Sbjct: 136 --CTNACKRILEVMQQEALSTNKGEICLKILAHNNLIGRIIGKSGNTIKRIMQDTDTKIT 193
Query: 169 VFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRET 209
V + + I+ V G ++ A I+++LR++
Sbjct: 194 VSSINDINSFN--LERIITVKGLIENMSRAENQISTKLRQS 232
>gi|194306633|ref|NP_001123613.1| poly(rC)-binding protein 3 isoform 2 [Homo sapiens]
gi|119629728|gb|EAX09323.1| poly(rC) binding protein 3, isoform CRA_a [Homo sapiens]
Length = 345
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 68/243 (27%), Positives = 103/243 (42%), Gaps = 49/243 (20%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMRH 109
+ +LL H +VGS+IGK G V+ + E+GA I I++ + ERIV I+
Sbjct: 46 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE--GNCPERIVTITG-------- 95
Query: 110 SPAQDAVMRVHSRIA---------EIGFEPGQA---VVARLLVHSQQIGCLLGRGGHIVS 157
DA+ + + IA + P + V RL+V + Q G L+G+GG +
Sbjct: 96 --PTDAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIK 153
Query: 158 EMRRATGASIRVFPKDQAPR--------CGSPHDEIVQVIGNYHSVQDALFHITSRLRET 209
E+R +TGA ++V D P G+P D I+Q + V + I +
Sbjct: 154 EIRESTGAQVQV-AGDMLPNSTERAVTISGTP-DAIIQCVKQICVVMLEAYTIQGQ---- 207
Query: 210 IFPMKRPGPNNGHSYLPPFPEMPPPPFRPRHNPASPGSYPSPVGPFHSMDRG---MGPSQ 266
+ + P H + P PP + NPA PG P HS + MG S
Sbjct: 208 -YAIPHPDLTKLHQL--AMQQTPFPPLG-QTNPAFPGEKL----PLHSSEEAQNLMGQSS 259
Query: 267 PFD 269
D
Sbjct: 260 GLD 262
Score = 43.9 bits (102), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 42/74 (56%)
Query: 350 STTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATEGVVMVSGTSDQMRA 409
++T E+ IP + + G + ++ IRQ+SGA + + + G++E + ++GT +
Sbjct: 267 ASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQITITGTPANISL 326
Query: 410 AQSLIHAFILCGVT 423
AQ LI+A + VT
Sbjct: 327 AQYLINARLTSEVT 340
>gi|15082311|gb|AAH12061.1| PCBP3 protein [Homo sapiens]
Length = 313
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 68/243 (27%), Positives = 103/243 (42%), Gaps = 49/243 (20%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMRH 109
+ +LL H +VGS+IGK G V+ + E+GA I I++ + ERIV I+
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE--GNCPERIVTITG-------- 63
Query: 110 SPAQDAVMRVHSRIA---------EIGFEPGQA---VVARLLVHSQQIGCLLGRGGHIVS 157
DA+ + + IA + P + V RL+V + Q G L+G+GG +
Sbjct: 64 --PTDAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIK 121
Query: 158 EMRRATGASIRVFPKDQAPR--------CGSPHDEIVQVIGNYHSVQDALFHITSRLRET 209
E+R +TGA ++V D P G+P D I+Q + V + I +
Sbjct: 122 EIRESTGAQVQV-AGDMLPNSTERAVTISGTP-DAIIQCVKQICVVMLEAYTIQGQ---- 175
Query: 210 IFPMKRPGPNNGHSYLPPFPEMPPPPFRPRHNPASPGSYPSPVGPFHSMDRG---MGPSQ 266
+ + P H + P PP + NPA PG P HS + MG S
Sbjct: 176 -YAIPHPDLTKLHQL--AMQQTPFPPL-GQTNPAFPGEKL----PLHSSEEAQNLMGQSS 227
Query: 267 PFD 269
D
Sbjct: 228 GLD 230
Score = 43.5 bits (101), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 42/74 (56%)
Query: 350 STTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATEGVVMVSGTSDQMRA 409
++T E+ IP + + G + ++ IRQ+SGA + + + G++E + ++GT +
Sbjct: 235 ASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQITITGTPANISL 294
Query: 410 AQSLIHAFILCGVT 423
AQ LI+A + VT
Sbjct: 295 AQYLINARLTSEVT 308
>gi|402590061|gb|EJW83992.1| hypothetical protein WUBG_05097, partial [Wuchereria bancrofti]
Length = 210
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 88/184 (47%), Gaps = 29/184 (15%)
Query: 60 KVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSE-----MRHSPAQD 114
+VGS+IGK G ++ ++++GA I I+D ERIV I+ + M + Q
Sbjct: 1 EVGSIIGKRGDHIKLIRDQSGAKINISD--GSCPERIVTITGSIGTINKAFGMICAKLQQ 58
Query: 115 AVMRVHSRIAEIGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQ 174
+ + + I P + RL+V + Q GC++G+GG + E+R ATGASI+V +
Sbjct: 59 DLQALPNSI------PKPPITMRLIVPATQCGCIIGKGGTKIKEIREATGASIQV-ASEM 111
Query: 175 APRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKRPGPNNGHSYLPPFPEMPPP 234
P S + V + G+ S+ D + +I L E P G++ P P P
Sbjct: 112 LP---SSTERAVTISGSADSIVDCMRNICQILLE--------APPKGNT----LPYRPKP 156
Query: 235 PFRP 238
F P
Sbjct: 157 TFNP 160
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIA-DILPDSEERIVVISARENS 105
+ +L+ + G +IGKGG+ ++ + TGASI++A ++LP S ER V IS +S
Sbjct: 72 ITMRLIVPATQCGCIIGKGGTKIKEIREATGASIQVASEMLPSSTERAVTISGSADS 128
>gi|395536709|ref|XP_003770354.1| PREDICTED: uncharacterized protein LOC100914843 [Sarcophilus
harrisii]
Length = 1087
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 93/177 (52%), Gaps = 20/177 (11%)
Query: 44 MFYEEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADIL-PDSEERIVVISAR 102
M E+EVV+ L VG++IGK G ++ GASIKIA P++ ER+V+I+
Sbjct: 906 MVPEQEVVY-LFIPTQAVGAIIGKKGHHIKQLARFAGASIKIAPPEGPEASERMVIITGP 964
Query: 103 ENSEMRHSPAQDAVMRVHSRIAEIG-FEPGQAV--VARLLVHSQQIGCLLGRGGHIVSEM 159
++ + A R+ ++ E F P + V A + V S G ++G+GG V+E+
Sbjct: 965 PEAQFK------AQGRIFGKLKEENFFNPKEEVKLKAHIRVPSSAAGRVIGKGGKTVNEL 1018
Query: 160 RRATGASIRVFPKDQAPRCGSPHDE-IVQVIGNYHSVQDALFHITSRLRETIFPMKR 215
T A + + P+DQ P +DE IV++IG++ + Q A ++RE + K+
Sbjct: 1019 HNLTSAEV-IVPRDQTP---DENDEVIVKIIGHFFASQTA----QRKIREIVQQAKQ 1067
Score = 38.5 bits (88), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 42/196 (21%), Positives = 85/196 (43%), Gaps = 9/196 (4%)
Query: 17 QRGYAPGYHSRGYSSGPGHETVGGRNRMFYEEEVVFKLLCHLDKVGSLIGKGGSIVRTFQ 76
+ G AP RG S H G + + ++L VG++IGK G ++
Sbjct: 500 EDGNAPPRSRRGDYSSREHGHSPGGPAQAKQLDFPLRILVPTQFVGAIIGKEGLTIKNLT 559
Query: 77 NETGASIKI--ADILPDSEERIVVISARENSEMRHSPAQDAVMRVHSRIAEIGFEPGQAV 134
+T + + I + SE+ + + ++ E + S A ++ + + A+ + + +
Sbjct: 560 KQTQSKVDIHRKENAGASEKPVTIHASPEGA----SEACRMILEIMQKEAD-ETKAVEEI 614
Query: 135 VARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHS 194
++L H+ +G L+G+ G + ++ + TG I + P Q +P + + V G +
Sbjct: 615 PLKILAHNSLVGRLIGKEGRNLKKIEQDTGTKITISPL-QDLTIYNP-ERTITVKGPIEA 672
Query: 195 VQDALFHITSRLRETI 210
A I +LRE
Sbjct: 673 CSSAEVEIMRKLREAF 688
>gi|426218395|ref|XP_004003432.1| PREDICTED: poly(rC)-binding protein 3 isoform 1 [Ovis aries]
Length = 345
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 67/234 (28%), Positives = 103/234 (44%), Gaps = 31/234 (13%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMRH 109
+ +LL H +VGS+IGK G V+ + E+GA I I++ + ERIV I+ ++ +
Sbjct: 46 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE--GNCPERIVTITGPTDAIFK- 102
Query: 110 SPAQDAVMRVHSRIAEIGFEPGQA---VVARLLVHSQQIGCLLGRGGHIVSEMRRATGAS 166
+ A A I + P + V RL+V + Q G L+G+GG + E+R +TGA
Sbjct: 103 AFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQ 162
Query: 167 IRVFPKDQAPR--------CGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKRPGP 218
++V D P G+P D I+Q + V + I + + + P
Sbjct: 163 VQV-AGDMLPNSTERAVTISGTP-DAIIQCVKQICVVMLEAYTIQGQ-----YAIPHPDL 215
Query: 219 NNGHSYLPPFPEMPPPPFRPRHNPASPGSYPSPVGPFHSMDRG---MGPSQPFD 269
H + P PP + NPA PG P HS + MG S D
Sbjct: 216 TKLHQL--AMQQTPFPPLG-QTNPAFPGEKL----PLHSSEEAQNLMGQSSGLD 262
Score = 43.9 bits (102), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 42/74 (56%)
Query: 350 STTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATEGVVMVSGTSDQMRA 409
++T E+ IP + + G + ++ IRQ+SGA + + + G++E + ++GT +
Sbjct: 267 ASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQITITGTPANISL 326
Query: 410 AQSLIHAFILCGVT 423
AQ LI+A + VT
Sbjct: 327 AQYLINARLTSEVT 340
>gi|195350752|ref|XP_002041902.1| GM11285 [Drosophila sechellia]
gi|194123707|gb|EDW45750.1| GM11285 [Drosophila sechellia]
Length = 566
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 78/159 (49%), Gaps = 14/159 (8%)
Query: 59 DKVGSLIGKGGSIVRTFQNETGASIKIADI-----LPDSEERIVVISARENSEMRHSPAQ 113
+ VG++IG GS +R+ + AS+KIA + L ER V I + +
Sbjct: 305 NAVGAIIGTKGSHIRSIMRFSNASLKIAPLDADKPLDQQTERKVTIVGTPEGQWK----- 359
Query: 114 DAVMRVHSRIAEIGFEPGQ---AVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVF 170
A + ++ E GF G + LLV S Q+G ++G+GG V E++R TG+ I++
Sbjct: 360 -AQYMIFEKMREEGFMCGTDDVRLTVELLVASSQVGRIIGKGGQNVRELQRVTGSVIKLP 418
Query: 171 PKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRET 209
AP G + V +IG ++SVQ A I + + T
Sbjct: 419 EHALAPPSGGDEETPVHIIGLFYSVQSAQRRIRAMMLST 457
Score = 43.5 bits (101), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 35/160 (21%), Positives = 76/160 (47%), Gaps = 10/160 (6%)
Query: 52 FKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKI--ADILPDSEERIVVISARENSEMRH 109
++L + VG++IG+ GS +RT ++ A + + + + E+ I + EN
Sbjct: 80 LRILVQSEMVGAIIGRQGSTIRTITQQSRARVDVHRKENVGSLEKSITIYGNPENC---- 135
Query: 110 SPAQDAVMRVHSRIAEIGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRV 169
+ A ++ V + A I G+ + ++L H+ IG ++G+ G+ + + + T I V
Sbjct: 136 TNACKRILEVMQQEA-ISTNKGE-ICLKILAHNNLIGRIIGKSGNTIKRIMQDTDTKITV 193
Query: 170 FPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRET 209
+ + I+ V G ++ A I+++LR++
Sbjct: 194 SSINDINSFN--LERIITVKGLIENMSRAENQISTKLRQS 231
>gi|410897014|ref|XP_003961994.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2-like
[Takifugu rubripes]
Length = 607
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 92/174 (52%), Gaps = 20/174 (11%)
Query: 47 EEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADI-LPDSEERIVVISARENS 105
E+EV + L VG+LIGK G ++ + GASIK+A +PD+ ER+V+I+ +
Sbjct: 432 EQEVAY-LFIPTQAVGALIGKKGQHIKQLAHFAGASIKVAPAEMPDATERMVIITGTPEA 490
Query: 106 EMRHSPAQDAVMRVHSRIAEIGFEPGQAVVARLLVH----SQQIGCLLGRGGHIVSEMRR 161
+ + A R+ ++ E G+ V RL H S G ++G+GG V+E++
Sbjct: 491 QFK------AQGRIFGKLKEENIFTGKEEV-RLETHIKVPSTAAGRVIGKGGKTVNELQS 543
Query: 162 ATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKR 215
T A + + P+DQ P ++ +V++ G++ + Q A ++RE I +K+
Sbjct: 544 LTSAEV-IVPRDQTP--DEKNEVVVKICGHFFANQTA----QRKIREIIQQVKQ 590
>gi|242060324|ref|XP_002451451.1| hypothetical protein SORBIDRAFT_04g002170 [Sorghum bicolor]
gi|241931282|gb|EES04427.1| hypothetical protein SORBIDRAFT_04g002170 [Sorghum bicolor]
Length = 508
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 80/337 (23%), Positives = 132/337 (39%), Gaps = 61/337 (18%)
Query: 97 VVISARENSEMRHSPAQDAVMRVHSRIAEI---------GFEPGQAVVARLLVHSQQIGC 147
V++SA+E E SPA +A +++ I EI RLLV +Q
Sbjct: 113 VLVSAKEEVEAEMSPAMNAAIKIFKHINEIEEINSDGTLSASASDICSVRLLVPFEQAVH 172
Query: 148 LLGRGGHIVSEMRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLR 207
L+G+ G + + +TG ++R+ +D+ + + IV++ G V +AL + LR
Sbjct: 173 LIGKQGVTIKSIEESTGTTVRIRDEDELLSHETVDERIVEIRGASLKVLNALKSVLELLR 232
Query: 208 ETIFPMKRPGPNNGHSYLPPFPEMPPPPFRPRHNPASPGSYPSPVGPFHSMDRGMGPSQP 267
+ + H L F +P+ +YP + +Q
Sbjct: 233 KFLV---------DHGVLHLFERKNQEVVQPQ----DASNYP------------LAVNQD 267
Query: 268 FDHQAAFSHGMDPMVPPNSDRIPFPYGSERPGHGPTFDRPPSPRSWTPQGVGGGDPRGFD 327
F SHG DP+ S R+ + GH P+F P +P+G
Sbjct: 268 FLLSDQRSHG-DPI----SSRLLY-------GHDPSFCGPHHATDSLMIQQSRANPKGSR 315
Query: 328 ASSGFTPR---------NRPVESGNHAAILTSTTIEVVIPQLYMAHVYGENNSNLSHIRQ 378
G P ++P +S ++T T + +P Y V G N+ +IR
Sbjct: 316 FLYGRDPSFHDPYSRDLSQPTDS-----LITKITRTMQVPLAYAEDVIGVRGENIEYIRS 370
Query: 379 ISGANVVVNDPKPGATEGVVMVSGTSDQMRAAQSLIH 415
+SGA VV + E VM+ GT Q++ A L+
Sbjct: 371 VSGA-VVALEEIGDYQEVQVMIEGTPSQVQTAHQLVQ 406
>gi|218184511|gb|EEC66938.1| hypothetical protein OsI_33565 [Oryza sativa Indica Group]
Length = 800
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 68/123 (55%), Gaps = 3/123 (2%)
Query: 51 VFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMRHS 110
VF++L KVG++IG G +R ET A +++ + ER V+I A+E +
Sbjct: 241 VFRMLIPATKVGAVIGHSGERLRRLCEETKACVRVIGGHFAAAERAVIIFAKEQPDEPKP 300
Query: 111 PAQDAVMRVH-SRIAEIGFEP--GQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASI 167
PA DA++RV+ I + G + VVAR+L S+Q L+G G +++ +++A+ +I
Sbjct: 301 PAIDALLRVYECTINDDGLDVRYNNIVVARILTPSEQAASLIGDQGSVINYIKKASKTNI 360
Query: 168 RVF 170
V
Sbjct: 361 HVI 363
>gi|194762728|ref|XP_001963486.1| GF20264 [Drosophila ananassae]
gi|190629145|gb|EDV44562.1| GF20264 [Drosophila ananassae]
Length = 590
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 78/159 (49%), Gaps = 14/159 (8%)
Query: 59 DKVGSLIGKGGSIVRTFQNETGASIKIADI-----LPDSEERIVVISARENSEMRHSPAQ 113
+ VG++IG GS +R+ + AS+KIA + L ER V I + +
Sbjct: 312 NAVGAIIGTKGSHIRSIMRFSNASLKIAPLDADKPLDQQTERKVTIVGTPEGQWK----- 366
Query: 114 DAVMRVHSRIAEIGFEPGQA---VVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVF 170
A + ++ E GF G + LLV S Q+G ++G+GG V E++R TG+ I++
Sbjct: 367 -AQYMIFEKMREEGFMCGTDDVRLTVELLVASSQVGRIIGKGGQNVRELQRVTGSVIKLP 425
Query: 171 PKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRET 209
AP G + V +IG ++SVQ A I + + T
Sbjct: 426 EHALAPPSGGDEETPVHIIGPFYSVQSAQRRIRAMMLST 464
Score = 43.5 bits (101), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 32/161 (19%), Positives = 73/161 (45%), Gaps = 12/161 (7%)
Query: 52 FKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKI--ADILPDSEERIVVISARENSEMRH 109
++L + VG++IG+ GS +RT ++ A + + + + E+ I + EN
Sbjct: 87 LRILVQSEMVGAIIGRQGSTIRTITQQSRARVDVHRKENVGSVEKSITIYGNPEN----- 141
Query: 110 SPAQDAVMRVHSRIAEIGFEPGQA-VVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIR 168
+A R+ + + + + ++L H+ IG ++G+ G+ + + + T I
Sbjct: 142 --CTNACKRILEVMQQEALSTNKGEICLKILAHNNLIGRIIGKSGNTIKRIMQDTDTKIT 199
Query: 169 VFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRET 209
V + + I+ V G ++ A I+++LR++
Sbjct: 200 VSSINDINSFN--LERIITVKGLIENMSRAENQISTKLRQS 238
>gi|357144424|ref|XP_003573287.1| PREDICTED: uncharacterized protein LOC100834117 [Brachypodium
distachyon]
Length = 707
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 78/168 (46%), Gaps = 23/168 (13%)
Query: 59 DKVGSLIGKGGSIVRTFQNETGASIKI---ADILPDSEERIVVISARENSEMRHSPAQDA 115
+KVG LIGK G +R QN +GA I+I ++ D+ R V + + S + A
Sbjct: 168 NKVGVLIGKNGETIRNLQNSSGAKIQITKDGEVASDALTRPVELVGTQESIDK------A 221
Query: 116 VMRVHSRIAEI-----------GFEPGQAVVAR--LLVHSQQIGCLLGRGGHIVSEMRRA 162
+ S IAE GF PGQ+ + + V ++G ++G+GG + M+
Sbjct: 222 EQLIKSVIAEAEAGGSPALIAKGFGPGQSGSEQFEMSVPDNKVGLIIGKGGETIKNMQTR 281
Query: 163 TGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETI 210
+GA I++ P+ P + + V+V GN ++ A I + +
Sbjct: 282 SGARIQLIPQ-HPPEGTTLTERTVRVTGNKKQIEAAKELIKQAMNQVF 328
>gi|195481990|ref|XP_002101863.1| GE15370 [Drosophila yakuba]
gi|194189387|gb|EDX02971.1| GE15370 [Drosophila yakuba]
Length = 566
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 78/159 (49%), Gaps = 14/159 (8%)
Query: 59 DKVGSLIGKGGSIVRTFQNETGASIKIADI-----LPDSEERIVVISARENSEMRHSPAQ 113
+ VG++IG GS +R+ + AS+KIA + L ER V I + +
Sbjct: 306 NAVGAIIGTKGSHIRSIMRFSNASLKIAPLDADKPLDQQTERKVTIVGTPEGQWK----- 360
Query: 114 DAVMRVHSRIAEIGFEPGQ---AVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVF 170
A + ++ E GF G + LLV S Q+G ++G+GG V E++R TG+ I++
Sbjct: 361 -AQYMIFEKMREEGFMCGTDDVRLTVELLVASSQVGRIIGKGGQNVRELQRVTGSVIKLP 419
Query: 171 PKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRET 209
AP G + V +IG ++SVQ A I + + T
Sbjct: 420 EHALAPPSGGDEETPVHIIGPFYSVQSAQRRIRAMMLST 458
Score = 43.1 bits (100), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 32/161 (19%), Positives = 73/161 (45%), Gaps = 12/161 (7%)
Query: 52 FKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKI--ADILPDSEERIVVISARENSEMRH 109
++L + VG++IG+ GS +RT ++ A + + + + E+ I + EN
Sbjct: 81 LRILVQSEMVGAIIGRQGSTIRTITQQSRARVDVHRKENVGSLEKSITIYGNPEN----- 135
Query: 110 SPAQDAVMRVHSRIAEIGFEPGQA-VVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIR 168
+A R+ + + + + ++L H+ IG ++G+ G+ + + + T I
Sbjct: 136 --CTNACKRILEVMQQEALSTNKGEICLKILAHNNLIGRIIGKSGNTIKRIMQDTDTKIT 193
Query: 169 VFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRET 209
V + + I+ V G ++ A I+++LR++
Sbjct: 194 VSSINDINSFNL--ERIITVKGLIENMSRAENQISTKLRQS 232
>gi|324516472|gb|ADY46541.1| Poly(rC)-binding protein 3 [Ascaris suum]
Length = 360
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 88/198 (44%), Gaps = 37/198 (18%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMRH 109
+ +LL +VGS+IGK G +++ ++ +GA I I+D ERIV I+
Sbjct: 23 LTIRLLMQGKEVGSIIGKRGDHIKSIRDGSGAKINISD--GSCPERIVTITGNV------ 74
Query: 110 SPAQDAVMRVHSRIAEIGFEPGQA---------VVARLLVHSQQIGCLLGRGGHIVSEMR 160
D + + S I E QA + RL+V + Q G L+G+GG + E+R
Sbjct: 75 ----DTINKAFSMICNKFQEDMQALPNSVPKPPITMRLIVPATQCGSLIGKGGSKIKEIR 130
Query: 161 RATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKRPGPNN 220
ATGASI+V + P S + V + G+ ++ + HI L E P
Sbjct: 131 EATGASIQV-ASEMLP---SSTERAVTISGSADAIVLCMQHICHILLE--------APPK 178
Query: 221 GHSYLPPFPEMPPPPFRP 238
G + P P P F P
Sbjct: 179 GTT----LPYRPKPTFNP 192
>gi|17530887|ref|NP_511111.1| IGF-II mRNA-binding protein, isoform A [Drosophila melanogaster]
gi|24641108|ref|NP_727456.1| IGF-II mRNA-binding protein, isoform B [Drosophila melanogaster]
gi|24641110|ref|NP_727457.1| IGF-II mRNA-binding protein, isoform C [Drosophila melanogaster]
gi|7533029|gb|AAF63331.1|AF241237_1 IGF-II mRNA-binding protein [Drosophila melanogaster]
gi|17862978|gb|AAL39966.1| SD07045p [Drosophila melanogaster]
gi|22832057|gb|AAF47958.2| IGF-II mRNA-binding protein, isoform A [Drosophila melanogaster]
gi|22832058|gb|AAN09274.1| IGF-II mRNA-binding protein, isoform B [Drosophila melanogaster]
gi|22832059|gb|AAN09275.1| IGF-II mRNA-binding protein, isoform C [Drosophila melanogaster]
gi|220947510|gb|ACL86298.1| Imp-PA [synthetic construct]
gi|220956906|gb|ACL90996.1| Imp-PA [synthetic construct]
Length = 566
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 78/159 (49%), Gaps = 14/159 (8%)
Query: 59 DKVGSLIGKGGSIVRTFQNETGASIKIADI-----LPDSEERIVVISARENSEMRHSPAQ 113
+ VG++IG GS +R+ + AS+KIA + L ER V I + +
Sbjct: 305 NAVGAIIGTRGSHIRSIMRFSNASLKIAPLDADKPLDQQTERKVTIVGTPEGQWK----- 359
Query: 114 DAVMRVHSRIAEIGFEPGQ---AVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVF 170
A + ++ E GF G + LLV S Q+G ++G+GG V E++R TG+ I++
Sbjct: 360 -AQYMIFEKMREEGFMCGTDDVRLTVELLVASSQVGRIIGKGGQNVRELQRVTGSVIKLP 418
Query: 171 PKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRET 209
AP G + V +IG ++SVQ A I + + T
Sbjct: 419 EHALAPPSGGDEETPVHIIGLFYSVQSAQRRIRAMMLST 457
Score = 43.5 bits (101), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 35/160 (21%), Positives = 76/160 (47%), Gaps = 10/160 (6%)
Query: 52 FKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKI--ADILPDSEERIVVISARENSEMRH 109
++L + VG++IG+ GS +RT ++ A + + + + E+ I + EN
Sbjct: 80 LRILVQSEMVGAIIGRQGSTIRTITQQSRARVDVHRKENVGSLEKSITIYGNPENC---- 135
Query: 110 SPAQDAVMRVHSRIAEIGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRV 169
+ A ++ V + A I G+ + ++L H+ IG ++G+ G+ + + + T I V
Sbjct: 136 TNACKRILEVMQQEA-ISTNKGE-ICLKILAHNNLIGRIIGKSGNTIKRIMQDTDTKITV 193
Query: 170 FPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRET 209
+ + I+ V G ++ A I+++LR++
Sbjct: 194 SSINDINSFNL--ERIITVKGLIENMSRAENQISTKLRQS 231
>gi|324519086|gb|ADY47282.1| Poly(rC)-binding protein 3 [Ascaris suum]
Length = 342
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 88/198 (44%), Gaps = 37/198 (18%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMRH 109
+ +LL +VGS+IGK G +++ ++ +GA I I+D ERIV I+
Sbjct: 23 LTIRLLMQGKEVGSIIGKRGDHIKSIRDGSGAKINISD--GSCPERIVTITGNV------ 74
Query: 110 SPAQDAVMRVHSRIAEIGFEPGQA---------VVARLLVHSQQIGCLLGRGGHIVSEMR 160
D + + S I E QA + RL+V + Q G L+G+GG + E+R
Sbjct: 75 ----DTINKAFSMICNKFQEDMQALPNSVPKPPITMRLIVPATQCGSLIGKGGSKIKEIR 130
Query: 161 RATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKRPGPNN 220
ATGASI+V + P S + V + G+ ++ + HI L E P
Sbjct: 131 EATGASIQV-ASEMLP---SSTERAVTISGSADAIVLCMQHICHILLE--------APPK 178
Query: 221 GHSYLPPFPEMPPPPFRP 238
G + P P P F P
Sbjct: 179 GTT----LPYRPKPTFNP 192
>gi|357508127|ref|XP_003624352.1| KH domain-containing protein [Medicago truncatula]
gi|355499367|gb|AES80570.1| KH domain-containing protein [Medicago truncatula]
Length = 188
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 46/74 (62%), Gaps = 4/74 (5%)
Query: 114 DAVMRVHSRIAEIGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKD 173
+ V + + +IG G+AV+ V + IGCL+G+GG I++EMRR T ++IR+ K+
Sbjct: 14 EVVQLLQEELTKIGHSMGKAVI----VAANMIGCLIGKGGSIITEMRRLTRSNIRILSKE 69
Query: 174 QAPRCGSPHDEIVQ 187
P+ S DE+VQ
Sbjct: 70 NLPKIASDDDEMVQ 83
>gi|307110043|gb|EFN58280.1| hypothetical protein CHLNCDRAFT_142255 [Chlorella variabilis]
Length = 306
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 88/175 (50%), Gaps = 10/175 (5%)
Query: 49 EVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVI--SAREN-- 104
E V++L+ + +IG+GG+ VR + TG +K P + E++VV+ SARE
Sbjct: 103 ETVYRLVLDVVDTALIIGRGGNTVRQIEQTTGGRVKRLQEPPGAREQVVVVWNSARELPS 162
Query: 105 -SEMRHSPAQDAVMRVHSRIAEIGFEP-GQAVVARLLVHSQQIGCLLGRGGHIVSEMRRA 162
M + AQ+A++ R+ P GQ + ARLL+ Q ++ IV+E
Sbjct: 163 PGRMARNTAQEALVDCVRRVVFQENAPMGQPMSARLLISRTQEAGVMDNMNAIVAE---N 219
Query: 163 TGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKRPG 217
G SI + + P C +D +V++ G +S+ A+ ++ LRE ++RPG
Sbjct: 220 PGISIELKRAQELPACALDNDVLVELSGEKYSLLAAVEALSHVLREHPI-LERPG 273
>gi|148223980|ref|NP_001082843.1| uncharacterized protein LOC557028 [Danio rerio]
gi|94732695|emb|CAK10813.1| novel protein similar to human IGF-II mRNA-binding protein 2
(IMP-2) [Danio rerio]
gi|167614340|gb|ABZ89742.1| IGF-II mRNA-binding protein 2b variant 1 [Danio rerio]
gi|167614342|gb|ABZ89743.1| IGF-II mRNA-binding protein 2b variant 2 [Danio rerio]
Length = 436
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/187 (30%), Positives = 95/187 (50%), Gaps = 20/187 (10%)
Query: 47 EEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIAD-ILPDSEERIVVISARENS 105
E+EVV+ L VG+LIGK G ++ + GASIKIA PD ER+V+I+ +
Sbjct: 261 EQEVVY-LFIPTPAVGALIGKKGQHIKELAHFAGASIKIAAPESPDEPERMVIITGPPEA 319
Query: 106 EMRHSPAQDAVMRVHSRIAEIGFEPGQAVV---ARLLVHSQQIGCLLGRGGHIVSEMRRA 162
+ + A R++ ++ E F + V A + V S G ++G+GG V+E++
Sbjct: 320 QFK------AQGRIYGKLKEENFFTAKEEVKLEAHIKVPSTAAGRVIGKGGKTVNELQNL 373
Query: 163 TGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKRPGPNNGH 222
T A + + P+DQ P D V++IG++ + Q A ++RE + +K+ H
Sbjct: 374 TSAEV-IVPRDQTP--DENDDVFVKIIGHFFASQTA----QRKIREIVQQVKQ--QERKH 424
Query: 223 SYLPPFP 229
+P P
Sbjct: 425 QQMPQTP 431
>gi|403299426|ref|XP_003940488.1| PREDICTED: RNA-binding protein Nova-2 [Saimiri boliviensis
boliviensis]
Length = 508
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 89/215 (41%), Gaps = 38/215 (17%)
Query: 18 RGYAPGYHSRGYSSGPGHETVGGRNRMFYEEEVVFKLLCHLDKVGSLIGKGGSIVRTFQN 77
R AP R + P R+ E E K+L GS+IGKGG + Q
Sbjct: 186 RACAPDSRKRPLETPP-EVVCTKRSNTGEEGEYFLKVLIPSYAAGSIIGKGGQTIVQLQK 244
Query: 78 ETGASIKIA---DILPDSEERIVVISARENSEMRHSPAQDAVMRVHSRIAE--------- 125
ETGA+IK++ D P + ER+ ++ +A+ VHS IAE
Sbjct: 245 ETGATIKLSKSKDFYPGTTERVCLVQG----------TAEALNAVHSFIAEKVREIPQAM 294
Query: 126 ------------IGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKD 173
P +A A+L+V + G ++G+GG V + +GA +++
Sbjct: 295 TKPEVVNILQPQTTMNPDRAKQAKLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQL---S 351
Query: 174 QAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRE 208
Q P + + +V V G V A+ I +++E
Sbjct: 352 QKPEGINLQERVVTVSGEPEQVHKAVSAIVQKVQE 386
>gi|449266969|gb|EMC77947.1| Insulin-like growth factor 2 mRNA-binding protein 2, partial
[Columba livia]
Length = 522
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/192 (31%), Positives = 96/192 (50%), Gaps = 16/192 (8%)
Query: 11 AAEPFHQRGYAPGYHSRGYSSGPGHETVGGRNRMFYEEEVVFKLLCHLDKVGSLIGKGGS 70
AA P+H + Y S Y + PG + E+EVV L VG++IGK G
Sbjct: 313 AATPYHPFASSSAYLSGLYGAPPG--SAFPHQHPLPEQEVV-NLFIPTQAVGAIIGKKGQ 369
Query: 71 IVRTFQNETGASIKIADIL-PDSEERIVVISARENSEMRHSPAQDAVMRVHSRIAEIG-F 128
++ GASIKIA PD+ ER+V+I+ ++ + A R+ ++ E F
Sbjct: 370 HIKQLARFAGASIKIAPAEGPDASERMVIITGPPEAQFK------AQGRIFGKLKEENFF 423
Query: 129 EPGQAVV--ARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAPRCGSPHDEIV 186
P + V A + V S G ++G+GG V+E++ T A + + P+DQ P + IV
Sbjct: 424 NPKEEVKLEAHIKVPSFAAGRVIGKGGKTVNELQNLTSAEV-IVPRDQTP--DENEEVIV 480
Query: 187 QVIGNYHSVQDA 198
++IG++ + Q A
Sbjct: 481 KIIGHFFASQTA 492
Score = 38.5 bits (88), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 43/194 (22%), Positives = 85/194 (43%), Gaps = 15/194 (7%)
Query: 17 QRGYAPGYHSRGYSSGPGHETVGGRNRMFYEEEVVFKLLCHLDKVGSLIGKGGSIVRTFQ 76
QR G+ SR S PG + + E ++L VG++IGK G ++
Sbjct: 88 QRSRRGGHSSRERGSSPGGSS------QPKQLEFPLRMLVPTQFVGAIIGKEGLTIKNLT 141
Query: 77 NETGASIKI--ADILPDSEERIVVISARENSEMRHSPAQDAVMRVHSRIAEIGFEPGQAV 134
+T + + I + +E+ I + + E S A ++ + + A+ + + +
Sbjct: 142 KQTQSKVDIHRKENAGAAEKPITIHATPEGC----SEACRMILDIMQKEAD-ETKSAEEI 196
Query: 135 VARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHS 194
++L H+ +G L+G+ G + ++ + TG I + P Q +P + + V G+ +
Sbjct: 197 PLKILAHNSLVGRLIGKEGRNLKKIEQDTGTKITISPL-QDLTIYNP-ERTITVKGSTEA 254
Query: 195 VQDALFHITSRLRE 208
A I +LRE
Sbjct: 255 CSKAQVEIMKKLRE 268
>gi|281360685|ref|NP_001162717.1| IGF-II mRNA-binding protein, isoform J [Drosophila melanogaster]
gi|272506050|gb|ACZ95252.1| IGF-II mRNA-binding protein, isoform J [Drosophila melanogaster]
gi|383873394|gb|AFH55503.1| FI20063p1 [Drosophila melanogaster]
Length = 580
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 78/159 (49%), Gaps = 14/159 (8%)
Query: 59 DKVGSLIGKGGSIVRTFQNETGASIKIADI-----LPDSEERIVVISARENSEMRHSPAQ 113
+ VG++IG GS +R+ + AS+KIA + L ER V I + +
Sbjct: 319 NAVGAIIGTRGSHIRSIMRFSNASLKIAPLDADKPLDQQTERKVTIVGTPEGQWK----- 373
Query: 114 DAVMRVHSRIAEIGFEPGQA---VVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVF 170
A + ++ E GF G + LLV S Q+G ++G+GG V E++R TG+ I++
Sbjct: 374 -AQYMIFEKMREEGFMCGTDDVRLTVELLVASSQVGRIIGKGGQNVRELQRVTGSVIKLP 432
Query: 171 PKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRET 209
AP G + V +IG ++SVQ A I + + T
Sbjct: 433 EHALAPPSGGDEETPVHIIGLFYSVQSAQRRIRAMMLST 471
Score = 41.2 bits (95), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 35/166 (21%), Positives = 76/166 (45%), Gaps = 15/166 (9%)
Query: 52 FKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKI--ADILPDSEERIVVISARENSEMRH 109
++L + VG++IG+ GS +RT ++ A + + + + E+ I + EN
Sbjct: 87 LRILVQSEMVGAIIGRQGSTIRTITQQSRARVDVHRKENVGSLEKSITIYGNPENC---- 142
Query: 110 SPAQDAVMRVHSRIAEIGFEPGQ------AVVARLLVHSQQIGCLLGRGGHIVSEMRRAT 163
+ A ++ V + A I G+ + ++L H+ IG ++G+ G+ + + + T
Sbjct: 143 TNACKRILEVMQQEA-ISTNKGELSPECSEICLKILAHNNLIGRIIGKSGNTIKRIMQDT 201
Query: 164 GASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRET 209
I V + + I+ V G ++ A I+++LR++
Sbjct: 202 DTKITVSSINDINSFN--LERIITVKGLIENMSRAENQISTKLRQS 245
>gi|25012807|gb|AAN71494.1| RE72930p [Drosophila melanogaster]
Length = 580
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 78/159 (49%), Gaps = 14/159 (8%)
Query: 59 DKVGSLIGKGGSIVRTFQNETGASIKIADI-----LPDSEERIVVISARENSEMRHSPAQ 113
+ VG++IG GS +R+ + AS+KIA + L ER V I + +
Sbjct: 319 NAVGAIIGTRGSHIRSIMRFSNASLKIAPLDADKPLDQQTERKVTIVGTPEGQWK----- 373
Query: 114 DAVMRVHSRIAEIGFEPGQA---VVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVF 170
A + ++ E GF G + LLV S Q+G ++G+GG V E++R TG+ I++
Sbjct: 374 -AQYMIFEKMREEGFMCGTDDVRLTVELLVASSQVGRIIGKGGQNVRELQRVTGSVIKLP 432
Query: 171 PKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRET 209
AP G + V +IG ++SVQ A I + + T
Sbjct: 433 EHALAPPSGGDEETPVHIIGLFYSVQSAQRRIRAMMLST 471
Score = 41.2 bits (95), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 35/166 (21%), Positives = 76/166 (45%), Gaps = 15/166 (9%)
Query: 52 FKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKI--ADILPDSEERIVVISARENSEMRH 109
++L + VG++IG+ GS +RT ++ A + + + + E+ I + EN
Sbjct: 87 LRILVQSEMVGAIIGRQGSTIRTITQQSRARVDVHRKENVGSLEKSITIYGNPENC---- 142
Query: 110 SPAQDAVMRVHSRIAEIGFEPGQ------AVVARLLVHSQQIGCLLGRGGHIVSEMRRAT 163
+ A ++ V + A I G+ + ++L H+ IG ++G+ G+ + + + T
Sbjct: 143 TNACKRILEVMQQEA-ISTNKGELSPECSEICLKILAHNNLIGRIIGKSGNTIKRIMQDT 201
Query: 164 GASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRET 209
I V + + I+ V G ++ A I+++LR++
Sbjct: 202 DTKITVSSINDINSFN--LERIITVKGLIENMSRAENQISTKLRQS 245
>gi|24641097|ref|NP_727451.1| IGF-II mRNA-binding protein, isoform D [Drosophila melanogaster]
gi|24641099|ref|NP_727452.1| IGF-II mRNA-binding protein, isoform E [Drosophila melanogaster]
gi|24641101|ref|NP_727453.1| IGF-II mRNA-binding protein, isoform F [Drosophila melanogaster]
gi|24641103|ref|NP_727454.1| IGF-II mRNA-binding protein, isoform G [Drosophila melanogaster]
gi|24641105|ref|NP_727455.1| IGF-II mRNA-binding protein, isoform H [Drosophila melanogaster]
gi|22832052|gb|AAN09269.1| IGF-II mRNA-binding protein, isoform D [Drosophila melanogaster]
gi|22832053|gb|AAN09270.1| IGF-II mRNA-binding protein, isoform E [Drosophila melanogaster]
gi|22832054|gb|AAN09271.1| IGF-II mRNA-binding protein, isoform F [Drosophila melanogaster]
gi|22832055|gb|AAN09272.1| IGF-II mRNA-binding protein, isoform G [Drosophila melanogaster]
gi|22832056|gb|AAN09273.1| IGF-II mRNA-binding protein, isoform H [Drosophila melanogaster]
Length = 573
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 78/159 (49%), Gaps = 14/159 (8%)
Query: 59 DKVGSLIGKGGSIVRTFQNETGASIKIADI-----LPDSEERIVVISARENSEMRHSPAQ 113
+ VG++IG GS +R+ + AS+KIA + L ER V I + +
Sbjct: 312 NAVGAIIGTRGSHIRSIMRFSNASLKIAPLDADKPLDQQTERKVTIVGTPEGQWK----- 366
Query: 114 DAVMRVHSRIAEIGFEPGQA---VVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVF 170
A + ++ E GF G + LLV S Q+G ++G+GG V E++R TG+ I++
Sbjct: 367 -AQYMIFEKMREEGFMCGTDDVRLTVELLVASSQVGRIIGKGGQNVRELQRVTGSVIKLP 425
Query: 171 PKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRET 209
AP G + V +IG ++SVQ A I + + T
Sbjct: 426 EHALAPPSGGDEETPVHIIGLFYSVQSAQRRIRAMMLST 464
Score = 43.5 bits (101), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 35/160 (21%), Positives = 76/160 (47%), Gaps = 10/160 (6%)
Query: 52 FKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKI--ADILPDSEERIVVISARENSEMRH 109
++L + VG++IG+ GS +RT ++ A + + + + E+ I + EN
Sbjct: 87 LRILVQSEMVGAIIGRQGSTIRTITQQSRARVDVHRKENVGSLEKSITIYGNPENC---- 142
Query: 110 SPAQDAVMRVHSRIAEIGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRV 169
+ A ++ V + A I G+ + ++L H+ IG ++G+ G+ + + + T I V
Sbjct: 143 TNACKRILEVMQQEA-ISTNKGE-ICLKILAHNNLIGRIIGKSGNTIKRIMQDTDTKITV 200
Query: 170 FPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRET 209
+ + I+ V G ++ A I+++LR++
Sbjct: 201 SSINDINSFN--LERIITVKGLIENMSRAENQISTKLRQS 238
>gi|222623934|gb|EEE58066.1| hypothetical protein OsJ_08922 [Oryza sativa Japonica Group]
Length = 313
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 92/190 (48%), Gaps = 18/190 (9%)
Query: 52 FKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIA---DILPDSEERIVVISARENSEMR 108
+ L G +IGKGGS + FQ+++GA I+++ + P + +RI+++S + ++
Sbjct: 13 LRFLVSNTAAGCIIGKGGSTINEFQSQSGARIQLSRSHEFFPGTNDRIIMVSGLFDEVIK 72
Query: 109 HSPAQDAVMRVHSRIAEIGFEPGQAVV---ARLLVHSQQIGCLLGRGGHIVSEMRRATGA 165
A+ + ++ G E +A RL+V + G ++G+GG + + A
Sbjct: 73 ------AMELILEKLLAEGEESNEAEARPKVRLVVPNSSCGGIIGKGGSTIKSFIEDSHA 126
Query: 166 SIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETI-FP--MKRPGPNNGH 222
I++ P+D HD +V V G A++ I S+L E + +P + P P G
Sbjct: 127 GIKISPQDN--NFVGLHDRLVTVTGPLDHQMRAIYLILSKLSEDVHYPPNLSSPFPYAGL 184
Query: 223 SYLPPFPEMP 232
+ P +P +P
Sbjct: 185 GF-PSYPGVP 193
>gi|431838851|gb|ELK00780.1| Insulin-like growth factor 2 mRNA-binding protein 2 [Pteropus
alecto]
Length = 820
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 82/157 (52%), Gaps = 13/157 (8%)
Query: 46 YEEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADIL-PDSEERIVVISAREN 104
Y E+ + L VG++IGK G+ ++ GASIKIA PD ER+V+I+
Sbjct: 645 YPEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITGPPE 704
Query: 105 SEMRHSPAQDAVMRVHSRIAEIG-FEPGQAVV--ARLLVHSQQIGCLLGRGGHIVSEMRR 161
++ + A R+ ++ E F P + V A + V S G ++G+GG V+E++
Sbjct: 705 AQFK------AQGRIFGKLKEENFFNPKEEVKLEAHIRVPSSTAGRVIGKGGKTVNELQN 758
Query: 162 ATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDA 198
T A + + P+DQ P + IV++IG++ + Q A
Sbjct: 759 LTSAEV-IVPRDQTP--DENEEVIVRIIGHFFASQTA 792
>gi|386764191|ref|NP_001245616.1| IGF-II mRNA-binding protein, isoform L [Drosophila melanogaster]
gi|383293324|gb|AFH07330.1| IGF-II mRNA-binding protein, isoform L [Drosophila melanogaster]
Length = 638
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 78/159 (49%), Gaps = 14/159 (8%)
Query: 59 DKVGSLIGKGGSIVRTFQNETGASIKIADI-----LPDSEERIVVISARENSEMRHSPAQ 113
+ VG++IG GS +R+ + AS+KIA + L ER V I + +
Sbjct: 377 NAVGAIIGTRGSHIRSIMRFSNASLKIAPLDADKPLDQQTERKVTIVGTPEGQWK----- 431
Query: 114 DAVMRVHSRIAEIGFEPGQA---VVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVF 170
A + ++ E GF G + LLV S Q+G ++G+GG V E++R TG+ I++
Sbjct: 432 -AQYMIFEKMREEGFMCGTDDVRLTVELLVASSQVGRIIGKGGQNVRELQRVTGSVIKLP 490
Query: 171 PKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRET 209
AP G + V +IG ++SVQ A I + + T
Sbjct: 491 EHALAPPSGGDEETPVHIIGLFYSVQSAQRRIRAMMLST 529
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 35/166 (21%), Positives = 76/166 (45%), Gaps = 15/166 (9%)
Query: 52 FKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKI--ADILPDSEERIVVISARENSEMRH 109
++L + VG++IG+ GS +RT ++ A + + + + E+ I + EN
Sbjct: 145 LRILVQSEMVGAIIGRQGSTIRTITQQSRARVDVHRKENVGSLEKSITIYGNPENC---- 200
Query: 110 SPAQDAVMRVHSRIAEIGFEPGQ------AVVARLLVHSQQIGCLLGRGGHIVSEMRRAT 163
+ A ++ V + A I G+ + ++L H+ IG ++G+ G+ + + + T
Sbjct: 201 TNACKRILEVMQQEA-ISTNKGELSPECSEICLKILAHNNLIGRIIGKSGNTIKRIMQDT 259
Query: 164 GASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRET 209
I V + + I+ V G ++ A I+++LR++
Sbjct: 260 DTKITVSSINDINSFN--LERIITVKGLIENMSRAENQISTKLRQS 303
>gi|47209955|emb|CAF90944.1| unnamed protein product [Tetraodon nigroviridis]
Length = 164
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 77/165 (46%), Gaps = 28/165 (16%)
Query: 57 HLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMRHSPAQDAV 116
HL +VGS+IGK G V+ + E+GA I I++ S ERIV I+ A +A+
Sbjct: 4 HLQEVGSIIGKKGETVKKIREESGARINISE--GSSPERIVTITG----------ATEAI 51
Query: 117 MRVHSRIAEIGFEPGQA------------VVARLLVHSQQIGCLLGRGGHIVSEMRRATG 164
R + IA+ E A V RL+ Q G L+G+GG + E+R TG
Sbjct: 52 FRTFAMIAQKFEEDINAAMSNSNVTSKPPVTLRLVFPGSQCGSLIGKGGSKIKEIRETTG 111
Query: 165 ASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRET 209
A ++V D P + V + G ++ + HI S + E+
Sbjct: 112 AQVQV-AGDMLP---DSTERAVTISGTPQAITQCVRHICSVMLES 152
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 35/52 (67%), Gaps = 1/52 (1%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIA-DILPDSEERIVVIS 100
V +L+ + GSLIGKGGS ++ + TGA +++A D+LPDS ER V IS
Sbjct: 81 VTLRLVFPGSQCGSLIGKGGSKIKEIRETTGAQVQVAGDMLPDSTERAVTIS 132
>gi|386764188|ref|NP_001036268.2| IGF-II mRNA-binding protein, isoform K [Drosophila melanogaster]
gi|383293323|gb|ABI30974.2| IGF-II mRNA-binding protein, isoform K [Drosophila melanogaster]
Length = 631
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 78/159 (49%), Gaps = 14/159 (8%)
Query: 59 DKVGSLIGKGGSIVRTFQNETGASIKIADI-----LPDSEERIVVISARENSEMRHSPAQ 113
+ VG++IG GS +R+ + AS+KIA + L ER V I + +
Sbjct: 370 NAVGAIIGTRGSHIRSIMRFSNASLKIAPLDADKPLDQQTERKVTIVGTPEGQWK----- 424
Query: 114 DAVMRVHSRIAEIGFEPGQ---AVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVF 170
A + ++ E GF G + LLV S Q+G ++G+GG V E++R TG+ I++
Sbjct: 425 -AQYMIFEKMREEGFMCGTDDVRLTVELLVASSQVGRIIGKGGQNVRELQRVTGSVIKLP 483
Query: 171 PKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRET 209
AP G + V +IG ++SVQ A I + + T
Sbjct: 484 EHALAPPSGGDEETPVHIIGLFYSVQSAQRRIRAMMLST 522
Score = 40.8 bits (94), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 35/166 (21%), Positives = 76/166 (45%), Gaps = 15/166 (9%)
Query: 52 FKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKI--ADILPDSEERIVVISARENSEMRH 109
++L + VG++IG+ GS +RT ++ A + + + + E+ I + EN
Sbjct: 138 LRILVQSEMVGAIIGRQGSTIRTITQQSRARVDVHRKENVGSLEKSITIYGNPENC---- 193
Query: 110 SPAQDAVMRVHSRIAEIGFEPGQ------AVVARLLVHSQQIGCLLGRGGHIVSEMRRAT 163
+ A ++ V + A I G+ + ++L H+ IG ++G+ G+ + + + T
Sbjct: 194 TNACKRILEVMQQEA-ISTNKGELSPECSEICLKILAHNNLIGRIIGKSGNTIKRIMQDT 252
Query: 164 GASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRET 209
I V + + I+ V G ++ A I+++LR++
Sbjct: 253 DTKITVSSINDINSFN--LERIITVKGLIENMSRAENQISTKLRQS 296
>gi|170592745|ref|XP_001901125.1| KH domain containing protein [Brugia malayi]
gi|158591192|gb|EDP29805.1| KH domain containing protein [Brugia malayi]
Length = 354
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 80/168 (47%), Gaps = 20/168 (11%)
Query: 52 FKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSE--ERIV-VISARENSEMR 108
+LL G++IGK G V+ Q E A++ + PDS+ ER+V +++A EN
Sbjct: 69 LRLLVTSRGAGAIIGKKGESVKNIQTECDATVSV----PDSQTPERVVQLVAAVEN---- 120
Query: 109 HSPAQDAVMRVHSRIAEIGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIR 168
V + +RI E+ + ++LVH G ++GRGG + E+R G ++
Sbjct: 121 ---VVKCVEMIIARIDEVHDNQNRDSELKVLVHQSHAGAVIGRGGSRIKELREENGVDLK 177
Query: 169 VFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKRP 216
V+ + C + I+Q+ G + L I + L+E P+K P
Sbjct: 178 VY----SECCPQSTERIIQINGKPEKIVACLVTIINTLKE--IPIKGP 219
>gi|348519757|ref|XP_003447396.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2-like
isoform 1 [Oreochromis niloticus]
Length = 611
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/175 (31%), Positives = 92/175 (52%), Gaps = 22/175 (12%)
Query: 47 EEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADI-LPDSEERIVVISARENS 105
E+EVV+ L VG+LIGK G ++ + GASIKIA PD ER+V+I+ +
Sbjct: 436 EQEVVY-LFIPTQAVGALIGKKGQHIKQLAHFAGASIKIAPAESPDVTERMVIITGTPEA 494
Query: 106 EMRHSPAQDAVMRVHSRIAEIGFEPGQAVVARLLVH----SQQIGCLLGRGGHIVSEMRR 161
+ + A R+ ++ E F + V +L H S G ++G+GG V+E++
Sbjct: 495 QFK------AQGRIFGKLKEENFFSAKEEV-KLETHIKVPSSAAGRVIGKGGKTVNELQN 547
Query: 162 ATGASIRVFPKDQAPRCGSPHDEI-VQVIGNYHSVQDALFHITSRLRETIFPMKR 215
T A + + P+DQ P +DE+ V++ G++ + Q A ++RE I +K+
Sbjct: 548 LTSAEV-IVPRDQTP---DENDEVFVKISGHFFASQTA----QRKIREIIQQVKQ 594
>gi|256083131|ref|XP_002577803.1| heterogeneous nuclear ribonucleoprotein [Schistosoma mansoni]
gi|353230295|emb|CCD76466.1| putative heterogeneous nuclear ribonucleoprotein k [Schistosoma
mansoni]
Length = 322
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 75/170 (44%), Gaps = 38/170 (22%)
Query: 49 EVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSE--ERIVVISA----- 101
+V + L G +IGKGG ++ + E S+K+ +PDS ER++V+
Sbjct: 8 KVELRFLISTKAAGVIIGKGGENIKKIREE--YSVKVT--IPDSNGPERVLVLDGDLGSV 63
Query: 102 ----RENSEMRHSPAQDAVMRVHSRIAEIGFEPGQAVVARLLVHSQQIGCLLGRGGHIVS 157
REN E S D V RLLVH Q GC++GR G+ +
Sbjct: 64 IEIFRENLEKMQSNRDDGVD------------------LRLLVHQSQAGCVIGRAGYKIK 105
Query: 158 EMRRATGA-SIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRL 206
E+R +G +++V+ C D ++Q++G+ V D L I L
Sbjct: 106 ELREQSGLHTLKVYQM----LCPCSTDRVIQLVGDVGKVLDCLRSIAELL 151
>gi|125597123|gb|EAZ36903.1| hypothetical protein OsJ_21247 [Oryza sativa Japonica Group]
Length = 114
Score = 63.5 bits (153), Expect = 2e-07, Method: Composition-based stats.
Identities = 39/102 (38%), Positives = 56/102 (54%), Gaps = 1/102 (0%)
Query: 319 GGGDPRGFDASSGFTPRNRPVESGNHAA-ILTSTTIEVVIPQLYMAHVYGENNSNLSHIR 377
GGG F+ S R + A ++T +T+EVVIP+ +A + S L+ I
Sbjct: 4 GGGANMSFEQGSNINDDMRQSAAKRFAVPLVTRSTLEVVIPKSAVASLTMRAGSKLAQIS 63
Query: 378 QISGANVVVNDPKPGATEGVVMVSGTSDQMRAAQSLIHAFIL 419
++SGA V + D +P A E VV +SGT +Q AQSL+ FIL
Sbjct: 64 EMSGATVTLADERPDAIEKVVRISGTPEQADKAQSLLQGFIL 105
>gi|296477630|tpg|DAA19745.1| TPA: neuro-oncological ventral antigen 2-like [Bos taurus]
Length = 640
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 81/186 (43%), Gaps = 37/186 (19%)
Query: 47 EEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIA---DILPDSEERIVVISARE 103
E E K+L GS+IGKGG + Q ETGA+IK++ D P + ER+ ++
Sbjct: 178 EGEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQG-- 235
Query: 104 NSEMRHSPAQDAVMRVHSRIAE---------------------IGFEPGQAVVARLLVHS 142
+A+ VHS IAE P +A A+L+V +
Sbjct: 236 --------TAEALNAVHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVPN 287
Query: 143 QQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHI 202
G ++G+GG V + +GA +++ Q P + + +V V G V A+ I
Sbjct: 288 STAGLIIGKGGATVKAVMEQSGAWVQL---SQKPEGINLQERVVTVSGEPEQVHKAVSAI 344
Query: 203 TSRLRE 208
+++E
Sbjct: 345 VQKVQE 350
>gi|345785612|ref|XP_855043.2| PREDICTED: RNA-binding protein Nova-2 [Canis lupus familiaris]
Length = 597
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 81/186 (43%), Gaps = 37/186 (19%)
Query: 47 EEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIA---DILPDSEERIVVISARE 103
E E K+L GS+IGKGG + Q ETGA+IK++ D P + ER+ ++
Sbjct: 135 EGEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQG-- 192
Query: 104 NSEMRHSPAQDAVMRVHSRIAE---------------------IGFEPGQAVVARLLVHS 142
+A+ VHS IAE P +A A+L+V +
Sbjct: 193 --------TAEALNAVHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVPN 244
Query: 143 QQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHI 202
G ++G+GG V + +GA +++ Q P + + +V V G V A+ I
Sbjct: 245 STAGLIIGKGGATVKAVMEQSGAWVQL---SQKPEGINLQERVVTVSGEPEQVHKAVSAI 301
Query: 203 TSRLRE 208
+++E
Sbjct: 302 VQKVQE 307
>gi|195394077|ref|XP_002055672.1| GJ18657 [Drosophila virilis]
gi|194150182|gb|EDW65873.1| GJ18657 [Drosophila virilis]
Length = 650
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 78/159 (49%), Gaps = 14/159 (8%)
Query: 59 DKVGSLIGKGGSIVRTFQNETGASIKIADI-----LPDSEERIVVISARENSEMRHSPAQ 113
+ VG++IG GS +R+ + AS+KIA + L ER V I + +
Sbjct: 370 NAVGAIIGTKGSHIRSIMRFSSASLKIAPLDADKPLDQQTERKVTIVGTPEGQWK----- 424
Query: 114 DAVMRVHSRIAEIGFEPGQA---VVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVF 170
A + ++ E GF G + LLV S Q+G ++G+GG V E++R TG+ I++
Sbjct: 425 -AQYMIFEKMREEGFMCGTDDVRLTVELLVASSQVGRIIGKGGQNVRELQRVTGSVIKLP 483
Query: 171 PKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRET 209
AP G + V +IG ++SVQ A I + + T
Sbjct: 484 EHALAPPSGGDEETPVHIIGPFYSVQSAQRRIRAMMLST 522
Score = 42.7 bits (99), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 32/161 (19%), Positives = 73/161 (45%), Gaps = 12/161 (7%)
Query: 52 FKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKI--ADILPDSEERIVVISARENSEMRH 109
++L + VG++IG+ GS +RT ++ A + + + + E+ I + EN
Sbjct: 145 LRILVQSEMVGAIIGRQGSTIRTITQQSRARVDVHRKENVGSLEKSITIYGNPEN----- 199
Query: 110 SPAQDAVMRVHSRIAEIGFEPGQA-VVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIR 168
+A R+ + + + + ++L H+ IG ++G+ G+ + + + T I
Sbjct: 200 --CTNACKRILEVMQQEALSTNKGEICLKILAHNNLIGRIIGKSGNTIKRIMQDTDTKIT 257
Query: 169 VFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRET 209
V + + I+ V G ++ A I+++LR++
Sbjct: 258 VSSINDINSFN--LERIITVKGLIENMSRAENQISTKLRQS 296
>gi|346473549|gb|AEO36619.1| hypothetical protein [Amblyomma maculatum]
Length = 320
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 87/186 (46%), Gaps = 19/186 (10%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMRH 109
V + L G++IGKGG+ + + + E ASI + D ERI+ I A ++
Sbjct: 39 VDVRFLLQSRNAGAIIGKGGTNINSLRKEFKASISVPDC--PGPERILSIVADLDT---- 92
Query: 110 SPAQDAVMRVHSRIAEIGFEPGQ----AVVARLLVHSQQIGCLLGRGGHIVSEMRRATGA 165
D ++ + ++ + GQ RLL+H GC++GR G + E+R +TGA
Sbjct: 93 --LGDILLNIIPKLDDFAQHTGQNGGSESEMRLLMHQSHAGCIIGRAGCRIKELRESTGA 150
Query: 166 SIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMK-RPGPNNGHSY 224
+I+V C + IV+V G+ V D + I + + P+K P + H++
Sbjct: 151 NIKV----HGSCCPGSTERIVKVTGSPAVVVDCIKQICDII--GVAPIKGLNKPYDPHNF 204
Query: 225 LPPFPE 230
P F +
Sbjct: 205 DPEFSQ 210
Score = 43.1 bits (100), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 43/78 (55%), Gaps = 7/78 (8%)
Query: 131 GQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAPRCGSPHDEIVQVIG 190
G+AV R L+ S+ G ++G+GG ++ +R+ ASI V P C P + I+ ++
Sbjct: 36 GRAVDVRFLLQSRNAGAIIGKGGTNINSLRKEFKASISV------PDCPGP-ERILSIVA 88
Query: 191 NYHSVQDALFHITSRLRE 208
+ ++ D L +I +L +
Sbjct: 89 DLDTLGDILLNIIPKLDD 106
>gi|196016215|ref|XP_002117961.1| hypothetical protein TRIADDRAFT_61998 [Trichoplax adhaerens]
gi|190579434|gb|EDV19529.1| hypothetical protein TRIADDRAFT_61998 [Trichoplax adhaerens]
Length = 364
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 87/371 (23%), Positives = 146/371 (39%), Gaps = 82/371 (22%)
Query: 56 CHLDK-------VGSLIGKGGSIVRTFQNETGASIKIAD-ILPDSEERIVVISARENSEM 107
C +DK G +IGKGG+ +++F+ ++ A I I+D LP ERIV ++ ++
Sbjct: 45 CFIDKGLVEQKEAGRIIGKGGAKIKSFREQSTARINISDGSLP---ERIVTVNGPIDAVC 101
Query: 108 RHSPAQDAVMRVHSRIAEIGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASI 167
+ + RI + + LL+ ++G+GG V E+R +TGA +
Sbjct: 102 KAFKLICQKLDEDFRIINNSSKSEPTIKFDLLIPVPHCRSIIGKGGGTVKEIRESTGAQV 161
Query: 168 RVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKRPGPNNGHSYLPP 227
+ + P + D ++ + G+ ++ + ++ L E P+ + P Y P
Sbjct: 162 SI-ASNVLP---NSSDRVMTITGSSSAISKCIQRLSQLLSE--LPLGQHVP-----YQPK 210
Query: 228 FPEMPPPPFRP----RHNPASPGSYPSPVGPFHSMDRGMGPSQPFDHQAAFSHGMDPMVP 283
P +PP F+ A PG +P +P
Sbjct: 211 PPNVPPTAFQNGQVHELTFAVPGPFP--------------------------------IP 238
Query: 284 PNSDRIPFPYGSERPGHGPTFDRPPSPRSWTPQGVGGGDPRGFDASSGFTPRNRPVESGN 343
P++ PYG PP P + P D S T + +G
Sbjct: 239 PHAQ---LPYG------------PPVPV------ITQIAPYSVDIPSIVTQNFSAMSNGG 277
Query: 344 HAAILTSTTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATEGVVMVSGT 403
A +T + IP + + G ++ IRQISGAN+ + P T V +SGT
Sbjct: 278 TFA---RSTQLLKIPHDLIGCIIGRGGVKINEIRQISGANIKIASPNGDTTGRQVTISGT 334
Query: 404 SDQMRAAQSLI 414
+ + AAQ LI
Sbjct: 335 PESISAAQYLI 345
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 42/81 (51%), Gaps = 7/81 (8%)
Query: 47 EEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIA-DILPDSEERIVVISARENS 105
E + F LL + S+IGKGG V+ + TGA + IA ++LP+S +R++ I+
Sbjct: 125 EPTIKFDLLIPVPHCRSIIGKGGGTVKEIRESTGAQVSIASNVLPNSSDRVMTITGSS-- 182
Query: 106 EMRHSPAQDAVMRVHSRIAEI 126
S + R+ ++E+
Sbjct: 183 ----SAISKCIQRLSQLLSEL 199
>gi|312085525|ref|XP_003144713.1| hypothetical protein LOAG_09137 [Loa loa]
Length = 327
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 85/188 (45%), Gaps = 24/188 (12%)
Query: 37 TVGGRNRM------FYEEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILP 90
T G R R E + +LL G++IGK G V+ Q E A++ + P
Sbjct: 21 TAGKRQRQDSYQKALAEGKYELRLLVTSRGAGAIIGKKGESVKNIQAECDATVSV----P 76
Query: 91 DSE--ERIVVISARENSEMRHSPAQDAVMRVHSRIAEIGFEPGQAVVARLLVHSQQIGCL 148
DS+ ER+V + A + +R V + +RI E+ + ++LVH G +
Sbjct: 77 DSQTPERVVQLVATVENVVR------CVEMIIARIDEVHDNQDRDSELKVLVHQSHAGAV 130
Query: 149 LGRGGHIVSEMRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRE 208
+GRGG + E+R G ++V+ + C + I+Q+ G + L I S L+E
Sbjct: 131 IGRGGSRIKELREENGVDLKVY----SECCPQSTERIIQINGKPEKIVACLVTIISTLKE 186
Query: 209 TIFPMKRP 216
P+K P
Sbjct: 187 --IPIKGP 192
>gi|256083129|ref|XP_002577802.1| heterogeneous nuclear ribonucleoprotein [Schistosoma mansoni]
gi|353230296|emb|CCD76467.1| putative heterogeneous nuclear ribonucleoprotein k [Schistosoma
mansoni]
Length = 368
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 75/170 (44%), Gaps = 38/170 (22%)
Query: 49 EVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSE--ERIVVISA----- 101
+V + L G +IGKGG ++ + E S+K+ +PDS ER++V+
Sbjct: 8 KVELRFLISTKAAGVIIGKGGENIKKIREE--YSVKVT--IPDSNGPERVLVLDGDLGSV 63
Query: 102 ----RENSEMRHSPAQDAVMRVHSRIAEIGFEPGQAVVARLLVHSQQIGCLLGRGGHIVS 157
REN E S D V RLLVH Q GC++GR G+ +
Sbjct: 64 IEIFRENLEKMQSNRDDGVD------------------LRLLVHQSQAGCVIGRAGYKIK 105
Query: 158 EMRRATGA-SIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRL 206
E+R +G +++V+ C D ++Q++G+ V D L I L
Sbjct: 106 ELREQSGLHTLKVYQM----LCPCSTDRVIQLVGDVGKVLDCLRSIAELL 151
Score = 39.3 bits (90), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 17/73 (23%), Positives = 43/73 (58%), Gaps = 1/73 (1%)
Query: 346 AILT-STTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATEGVVMVSGTS 404
+ILT +T+ +V + + + G + ++ +R S A++ ++ +PG + ++ ++GT
Sbjct: 291 SILTPTTSTQVSVSNKMIGAIMGRSGCRINQVRHESNADIKISKQEPGVEDRIITITGTP 350
Query: 405 DQMRAAQSLIHAF 417
+Q++ AQ L+ +
Sbjct: 351 EQIQNAQFLLQMW 363
>gi|74215286|dbj|BAE41861.1| unnamed protein product [Mus musculus]
Length = 530
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 89/174 (51%), Gaps = 17/174 (9%)
Query: 46 YEEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADIL-PDSEERIVVISAREN 104
Y E+ L VG++IGK G+ ++ GASIKIA PD ER+V+I+
Sbjct: 355 YPEQETVSLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITGPPE 414
Query: 105 SEMRHSPAQDAVMRVHSRIAEIG-FEPGQAVV--ARLLVHSQQIGCLLGRGGHIVSEMRR 161
++ + A R+ ++ E F P + V A + V S G ++G+GG V+E++
Sbjct: 415 AQFK------AQGRIFGKLKEENFFNPKEEVKLEAHIRVPSSTAGRVIGKGGKTVNELQN 468
Query: 162 ATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKR 215
T A + + P+DQ P + IV++IG++ + Q A ++RE + +K+
Sbjct: 469 LTSAEV-IVPRDQTP--DENEEVIVRIIGHFFASQTA----QRKVREIVQQVKQ 515
>gi|392337608|ref|XP_001075246.3| PREDICTED: RNA-binding protein Nova-2 [Rattus norvegicus]
Length = 560
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 80/176 (45%), Gaps = 17/176 (9%)
Query: 47 EEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIA---DILPDSEERIVVIS-AR 102
E E K+L GS+IGKGG + Q ETGA+IK++ D P + ER+ ++
Sbjct: 115 EGEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTA 174
Query: 103 ENSEMRHSPAQDAVMRVHSRIA----------EIGFEPGQAVVARLLVHSQQIGCLLGRG 152
E HS + V + + + P +A A+L+V + G ++G+G
Sbjct: 175 EALNAAHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVPNSTAGLIIGKG 234
Query: 153 GHIVSEMRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRE 208
G V + +GA +++ Q P + + +V V G V A+ I +++E
Sbjct: 235 GATVKAVMEQSGAWVQL---SQKPEGINLQERVVTVSGEPEQVHKAVSAIVQKVQE 287
Score = 38.5 bits (88), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 36/65 (55%), Gaps = 3/65 (4%)
Query: 353 IEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPK---PGATEGVVMVSGTSDQMRA 409
++V+IP + G+ + +++ +GA + ++ K PG TE V +V GT++ + A
Sbjct: 120 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEALNA 179
Query: 410 AQSLI 414
A S I
Sbjct: 180 AHSFI 184
>gi|2673961|gb|AAB88661.1| astrocytic NOVA-like RNA-binding protein [Homo sapiens]
Length = 498
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 83/192 (43%), Gaps = 37/192 (19%)
Query: 41 RNRMFYEEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIA---DILPDSEERIV 97
R+ E E K+L GS+IGKGG + Q ETGA+IK++ D P + ER+
Sbjct: 30 RSNTGEEGEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVC 89
Query: 98 VISARENSEMRHSPAQDAVMRVHSRIAE---------------------IGFEPGQAVVA 136
++ +A+ VHS IAE P +A A
Sbjct: 90 LVQG----------TAEALNAVHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQA 139
Query: 137 RLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQ 196
+L+V + G ++G+GG V + +GA +++ Q P + + +V V G V
Sbjct: 140 KLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQL---SQKPEGINLQERVVTVSGEPEQVH 196
Query: 197 DALFHITSRLRE 208
A+ I +++E
Sbjct: 197 KAVSAIVQKVQE 208
>gi|413933967|gb|AFW68518.1| hypothetical protein ZEAMMB73_983755, partial [Zea mays]
Length = 131
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/97 (38%), Positives = 53/97 (54%), Gaps = 17/97 (17%)
Query: 322 DPRGFDASSGFTPRNRPVESGNHAAILTSTTIEVVIPQLYMAHVYGENNSNLSHIRQISG 381
D RG ++SGF S+TIE+ IP + + G NL+ IRQISG
Sbjct: 31 DYRGLPSASGF-----------------SSTIELRIPNSSLESIVGVGGVNLAEIRQISG 73
Query: 382 ANVVVNDPKPGATEGVVMVSGTSDQMRAAQSLIHAFI 418
A + +++ G++E VV + GT DQ +AAQSL+ FI
Sbjct: 74 ARLRLHEAHAGSSESVVEIQGTLDQAKAAQSLLEGFI 110
>gi|432934409|ref|XP_004081928.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2-like
[Oryzias latipes]
Length = 600
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 91/174 (52%), Gaps = 20/174 (11%)
Query: 47 EEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADIL-PDSEERIVVISARENS 105
E+EVV+ L VG+LIGK G ++ + GASIKIA PD ER+V+I+ +
Sbjct: 425 EQEVVY-LFIPTQAVGALIGKKGQHIKQLAHFAGASIKIAPAESPDVTERMVIITGTPEA 483
Query: 106 EMRHSPAQDAVMRVHSRIAEIGFEPGQAVV---ARLLVHSQQIGCLLGRGGHIVSEMRRA 162
+ + A R+ ++ E F + V + V S G ++G+GG V+E++
Sbjct: 484 QFK------AQGRIFGKLKEENFFSAKEEVKLETHIKVPSSAAGRVIGKGGKTVNELQNL 537
Query: 163 TGASIRVFPKDQAPRCGSPHDEI-VQVIGNYHSVQDALFHITSRLRETIFPMKR 215
T A + + P+DQ P +DE+ V++ G++ + Q A ++RE I +K+
Sbjct: 538 TSAEV-IVPRDQIP---DENDEVFVKISGHFFASQTA----QRKIREIIQQVKQ 583
>gi|226504964|ref|NP_001141009.1| uncharacterized protein LOC100273088 [Zea mays]
gi|194702154|gb|ACF85161.1| unknown [Zea mays]
Length = 221
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 95/190 (50%), Gaps = 16/190 (8%)
Query: 47 EEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIA---DILPDSEERIVVISARE 103
E+ + + L G +IGKGGS + FQ+++GA I+++ + P + +RI+++S
Sbjct: 37 EKPIHLRFLVSNASAGCIIGKGGSTINDFQSQSGARIQLSRSHEFFPGTNDRIIMVSGLF 96
Query: 104 NSEMRHSPAQDAVM-RVHSRIAEIGFEPGQAVV---ARLLVHSQQIGCLLGRGGHIVSEM 159
M+ A + ++ ++ + + G E +A RL+V + G ++G+GG +
Sbjct: 97 GEVMK---AMELILEKLLAELLYQGEEFNEAEARPKVRLVVPNSSCGGIIGKGGATIKSF 153
Query: 160 RRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETI-FP--MKRP 216
+ A I++ P+D HD +V V G + + +A+ I +L E + +P + P
Sbjct: 154 IEESHAGIKISPQDN--NYVGLHDRLVTVTGTFDNQMNAIDLILKKLSEDVHYPANLSSP 211
Query: 217 GPNNGHS-YL 225
P G S YL
Sbjct: 212 FPYAGESCYL 221
>gi|410897345|ref|XP_003962159.1| PREDICTED: poly(rC)-binding protein 3-like [Takifugu rubripes]
Length = 321
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 67/123 (54%), Gaps = 6/123 (4%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMRH 109
+ +LL H +VGS+IGK G V+ + E+GA I I++ + ERIV I+ ++ +
Sbjct: 16 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE--GNCPERIVTITGPTDTIFK- 72
Query: 110 SPAQDAVMRVHSRIAEIGFEPGQA---VVARLLVHSQQIGCLLGRGGHIVSEMRRATGAS 166
+ A A I + P + V RL+V + Q G L+G+GG + EMR +TGA
Sbjct: 73 AFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEMRESTGAQ 132
Query: 167 IRV 169
++V
Sbjct: 133 VQV 135
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 79/328 (24%), Positives = 125/328 (38%), Gaps = 63/328 (19%)
Query: 133 AVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNY 192
+ RLL+H +++G ++G+ G V +MR +GA I + G+ + IV + G
Sbjct: 15 TLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE-------GNCPERIVTITGPT 67
Query: 193 HSVQDALFHITSRLRETIFPMKRPGPNNGHSYLPPFPEMPPPPFRPRHNPASPGSYPSPV 252
++ A I + E I N S P + PP R + GS +
Sbjct: 68 DTIFKAFAMIAYKFEEDII--------NSMSNSPATSK-PPVTLRLVVPASQCGSL---I 115
Query: 253 GPFHSMDRGMGPSQPFDHQAAFSHGMDPMVPPNSDRIPFPYGS----------------E 296
G S + M S Q A M+P +++R G+ E
Sbjct: 116 GKGGSKIKEMRESTGAQVQVA-----GDMLPNSTERAVTISGTPEAIIQCVKQICVVMLE 170
Query: 297 RPGHGPTFDRPPSPRSWTPQGVGGGDPRGFDASSG-------------------FTPRNR 337
P G T P P S TP GG FTP +
Sbjct: 171 SPPKGATIPYRPKPAS-TPVIFSGGQAYTIQGQYAIPHPDQLTKLHQLAMQQTPFTPLGQ 229
Query: 338 --PVESGNHAAILTSTTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATE 395
P G A+ ST E+ IP + + G + ++ IRQ+SGA + + + G++E
Sbjct: 230 ATPAFPGLDASPPASTH-ELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANAMEGSSE 288
Query: 396 GVVMVSGTSDQMRAAQSLIHAFILCGVT 423
+ ++GT + AQ LI+A + VT
Sbjct: 289 RQITITGTPANISLAQYLINARLTSEVT 316
>gi|116007842|ref|NP_001036619.1| mushroom-body expressed, isoform D [Drosophila melanogaster]
gi|113194920|gb|ABI31266.1| mushroom-body expressed, isoform D [Drosophila melanogaster]
Length = 539
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 78/161 (48%), Gaps = 7/161 (4%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMR- 108
+ +L+ +VGS+IGK G IV F+ E+GA I I+D ERIV +S N+
Sbjct: 24 LTIRLIMQGKEVGSIIGKKGEIVNRFREESGAKINISD--GSCPERIVTVSGTTNAIFSA 81
Query: 109 HSPAQDAVMRVHSRIAEIGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIR 168
+ S+ ++G + RL+V + Q G L+G+ G + E+R+ TG SI+
Sbjct: 82 FTLITKKFEEWCSQFNDVGKVGKTQIPIRLIVPASQCGSLIGKSGSKIKEIRQTTGCSIQ 141
Query: 169 VFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRET 209
V + P + + V + G+ + ++ I + E+
Sbjct: 142 V-ASEMLP---NSTERAVTLSGSAEQITQCIYQICLVMLES 178
Score = 43.1 bits (100), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Query: 47 EEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIA-DILPDSEERIVVIS 100
+ ++ +L+ + GSLIGK GS ++ + TG SI++A ++LP+S ER V +S
Sbjct: 104 KTQIPIRLIVPASQCGSLIGKSGSKIKEIRQTTGCSIQVASEMLPNSTERAVTLS 158
Score = 42.4 bits (98), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 38/66 (57%), Gaps = 2/66 (3%)
Query: 137 RLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQ 196
+ V + IGC++G+GG ++E+R+ +GA IR+ ++ R G D + + GN SV
Sbjct: 271 EMTVSNDLIGCIIGKGGTKIAEIRQISGAMIRISNCEE--REGGNTDRTITISGNPDSVA 328
Query: 197 DALFHI 202
A + I
Sbjct: 329 LAQYLI 334
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 40/80 (50%), Gaps = 7/80 (8%)
Query: 129 EPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAPRCGSPHDEIVQV 188
+P + RL++ +++G ++G+ G IV+ R +GA I + GS + IV V
Sbjct: 19 DPSVTLTIRLIMQGKEVGSIIGKKGEIVNRFREESGAKINISD-------GSCPERIVTV 71
Query: 189 IGNYHSVQDALFHITSRLRE 208
G +++ A IT + E
Sbjct: 72 SGTTNAIFSAFTLITKKFEE 91
>gi|348519761|ref|XP_003447398.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2-like
isoform 3 [Oreochromis niloticus]
Length = 588
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/175 (31%), Positives = 92/175 (52%), Gaps = 22/175 (12%)
Query: 47 EEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADIL-PDSEERIVVISARENS 105
E+EVV+ L VG+LIGK G ++ + GASIKIA PD ER+V+I+ +
Sbjct: 413 EQEVVY-LFIPTQAVGALIGKKGQHIKQLAHFAGASIKIAPAESPDVTERMVIITGTPEA 471
Query: 106 EMRHSPAQDAVMRVHSRIAEIGFEPGQAVVARLLVH----SQQIGCLLGRGGHIVSEMRR 161
+ + A R+ ++ E F + V +L H S G ++G+GG V+E++
Sbjct: 472 QFK------AQGRIFGKLKEENFFSAKEEV-KLETHIKVPSSAAGRVIGKGGKTVNELQN 524
Query: 162 ATGASIRVFPKDQAPRCGSPHDEI-VQVIGNYHSVQDALFHITSRLRETIFPMKR 215
T A + + P+DQ P +DE+ V++ G++ + Q A ++RE I +K+
Sbjct: 525 LTSAEV-IVPRDQTP---DENDEVFVKISGHFFASQTA----QRKIREIIQQVKQ 571
>gi|326922311|ref|XP_003207393.1| PREDICTED: poly(rC)-binding protein 3-like [Meleagris gallopavo]
Length = 313
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 69/246 (28%), Positives = 101/246 (41%), Gaps = 55/246 (22%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMRH 109
+ +LL H +VGS+IGK G V+ + E+GA I I++ + ERIV I+
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE--GNCPERIVTITG-------- 63
Query: 110 SPAQDAVMRVHSRIAEIGFEPGQA-------------VVARLLVHSQQIGCLLGRGGHIV 156
DA+ + + IA FE V RL+V + Q G L+G+GG +
Sbjct: 64 --PTDAIFKAFAMIA-YKFEEDITNSMSNSTATSKPPVTLRLVVPASQCGSLIGKGGSKI 120
Query: 157 SEMRRATGASIRVFPKDQAPR--------CGSPHDEIVQVIGNYHSVQDALFHITSRLRE 208
E+R +TGA ++V D P G+P D I+Q + V + I +
Sbjct: 121 KEIRESTGAQVQV-AGDMLPNSTERAVTISGTP-DAIIQCVKQICVVMLEAYTIQGQ--- 175
Query: 209 TIFPMKRPGPNNGHSYLPPFPEMPPPPFRP--RHNPASPGSYPSPVGPFHSMDRG---MG 263
+ + P H M PF P + PA PG P HS + MG
Sbjct: 176 --YAIPHPDLTKLHQL-----AMQQTPFTPLGQTTPAFPGEKL----PLHSSEEAQNLMG 224
Query: 264 PSQPFD 269
S D
Sbjct: 225 QSSGLD 230
Score = 43.1 bits (100), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 42/74 (56%)
Query: 350 STTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATEGVVMVSGTSDQMRA 409
++T E+ IP + + G + ++ IRQ+SGA + + + G++E + ++GT +
Sbjct: 235 ASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQITITGTPANISL 294
Query: 410 AQSLIHAFILCGVT 423
AQ LI+A + VT
Sbjct: 295 AQYLINARLTSEVT 308
>gi|291219869|ref|NP_001025048.2| neuro-oncological ventral antigen 2 [Mus musculus]
Length = 492
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 83/192 (43%), Gaps = 37/192 (19%)
Query: 41 RNRMFYEEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIA---DILPDSEERIV 97
R+ E E K+L GS+IGKGG + Q ETGA+IK++ D P + ER+
Sbjct: 24 RSNTGEEGEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVC 83
Query: 98 VISARENSEMRHSPAQDAVMRVHSRIAE---------------------IGFEPGQAVVA 136
++ +A+ VHS IAE P +A A
Sbjct: 84 LVQG----------TAEALNAVHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQA 133
Query: 137 RLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQ 196
+L+V + G ++G+GG V + +GA +++ Q P + + +V V G V
Sbjct: 134 KLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQL---SQKPEGINLQERVVTVSGEPEQVH 190
Query: 197 DALFHITSRLRE 208
A+ I +++E
Sbjct: 191 KAVSAIVQKVQE 202
>gi|383849051|ref|XP_003700160.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K-like
[Megachile rotundata]
Length = 460
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 89/181 (49%), Gaps = 21/181 (11%)
Query: 43 RMFYEEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSE--ERIVVIS 100
+ + + + +LL GS+IGKGG + +++ ASI I+PD ER++ IS
Sbjct: 40 KRYRQGDDELRLLIPSKVAGSIIGKGGQNITKLRSQYKASI----IVPDCPGPERVLTIS 95
Query: 101 ARENSEMRHSPAQDAVMRVHSRIAEIGFEPG-QAVVARLLVHSQQIGCLLGRGGHIVSEM 159
+ + ++ + V + E G G + R+LVH Q GC++G+GG + E+
Sbjct: 96 SDLPTVLQ------VLNEVVPNLEENGSRHGSDEIDVRMLVHQSQAGCIIGKGGLKIKEL 149
Query: 160 RRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKRPGPN 219
R TGA I+++ + C D ++ + G + D + + + ++ + P+K G N
Sbjct: 150 REKTGARIKIY----SHCCPHSTDRLISICGKPSTCIDCIRELIATIKTS--PLK--GMN 201
Query: 220 N 220
N
Sbjct: 202 N 202
Score = 45.1 bits (105), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 44/83 (53%), Gaps = 2/83 (2%)
Query: 336 NRPVESGNHAAILTSTTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATE 395
N GN + TST +V IP+ + G+ + + IR SGA + +++P PG+ +
Sbjct: 373 NNQGNQGNMGSNKTST--QVTIPKDLAGAIIGKGGARIRKIRSDSGAGITIDEPLPGSND 430
Query: 396 GVVMVSGTSDQMRAAQSLIHAFI 418
++ ++G Q++ AQ L+ +
Sbjct: 431 RIITITGLPSQIQMAQYLLQQSV 453
Score = 41.2 bits (95), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 30/42 (71%)
Query: 59 DKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVIS 100
D G++IGKGG+ +R ++++GA I I + LP S +RI+ I+
Sbjct: 395 DLAGAIIGKGGARIRKIRSDSGAGITIDEPLPGSNDRIITIT 436
>gi|256083127|ref|XP_002577801.1| heterogeneous nuclear ribonucleoprotein [Schistosoma mansoni]
gi|353230297|emb|CCD76468.1| putative heterogeneous nuclear ribonucleoprotein k [Schistosoma
mansoni]
Length = 363
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 75/170 (44%), Gaps = 38/170 (22%)
Query: 49 EVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSE--ERIVVISA----- 101
+V + L G +IGKGG ++ + E S+K+ +PDS ER++V+
Sbjct: 8 KVELRFLISTKAAGVIIGKGGENIKKIREE--YSVKVT--IPDSNGPERVLVLDGDLGSV 63
Query: 102 ----RENSEMRHSPAQDAVMRVHSRIAEIGFEPGQAVVARLLVHSQQIGCLLGRGGHIVS 157
REN E S D V RLLVH Q GC++GR G+ +
Sbjct: 64 IEIFRENLEKMQSNRDDGVD------------------LRLLVHQSQAGCVIGRAGYKIK 105
Query: 158 EMRRATGA-SIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRL 206
E+R +G +++V+ C D ++Q++G+ V D L I L
Sbjct: 106 ELREQSGLHTLKVYQM----LCPCSTDRVIQLVGDVGKVLDCLRSIAELL 151
Score = 38.5 bits (88), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 17/71 (23%), Positives = 42/71 (59%), Gaps = 1/71 (1%)
Query: 346 AILT-STTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATEGVVMVSGTS 404
+ILT +T+ +V + + + G + ++ +R S A++ ++ +PG + ++ ++GT
Sbjct: 291 SILTPTTSTQVSVSNKMIGAIMGRSGCRINQVRHESNADIKISKQEPGVEDRIITITGTP 350
Query: 405 DQMRAAQSLIH 415
+Q++ AQ L+
Sbjct: 351 EQIQNAQFLLQ 361
>gi|17737727|ref|NP_524208.1| mushroom-body expressed, isoform A [Drosophila melanogaster]
gi|1770212|emb|CAA67719.1| nucleic acid binding protein [Drosophila melanogaster]
gi|7296507|gb|AAF51792.1| mushroom-body expressed, isoform A [Drosophila melanogaster]
Length = 386
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 78/161 (48%), Gaps = 7/161 (4%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMR- 108
+ +L+ +VGS+IGK G IV F+ E+GA I I+D ERIV +S N+
Sbjct: 24 LTIRLIMQGKEVGSIIGKKGEIVNRFREESGAKINISD--GSCPERIVTVSGTTNAIFSA 81
Query: 109 HSPAQDAVMRVHSRIAEIGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIR 168
+ S+ ++G + RL+V + Q G L+G+ G + E+R+ TG SI+
Sbjct: 82 FTLITKKFEEWCSQFNDVGKVGKTQIPIRLIVPASQCGSLIGKSGSKIKEIRQTTGCSIQ 141
Query: 169 VFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRET 209
V + P + + V + G+ + ++ I + E+
Sbjct: 142 V-ASEMLP---NSTERAVTLSGSAEQITQCIYQICLVMLES 178
Score = 44.7 bits (104), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 51/98 (52%), Gaps = 8/98 (8%)
Query: 138 LLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQD 197
+ V + IGC++G+GG ++E+R+ +GA IR+ ++ R G D + + GN SV
Sbjct: 294 MTVSNDLIGCIIGKGGTKIAEIRQISGAMIRISNCEE--REGGNTDRTITISGNPDSVAL 351
Query: 198 ALFHITSRLRETIFPMKRPG-PNNGHSYLPPFPEMPPP 234
A + I R+ M+ G P G+ Y+ P + P
Sbjct: 352 AQYLINMRI-----SMETAGLPIPGYHYIAPSAIVKTP 384
Score = 42.7 bits (99), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Query: 47 EEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIA-DILPDSEERIVVIS 100
+ ++ +L+ + GSLIGK GS ++ + TG SI++A ++LP+S ER V +S
Sbjct: 104 KTQIPIRLIVPASQCGSLIGKSGSKIKEIRQTTGCSIQVASEMLPNSTERAVTLS 158
Score = 40.8 bits (94), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 40/80 (50%), Gaps = 7/80 (8%)
Query: 129 EPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAPRCGSPHDEIVQV 188
+P + RL++ +++G ++G+ G IV+ R +GA I + GS + IV V
Sbjct: 19 DPSVTLTIRLIMQGKEVGSIIGKKGEIVNRFREESGAKINISD-------GSCPERIVTV 71
Query: 189 IGNYHSVQDALFHITSRLRE 208
G +++ A IT + E
Sbjct: 72 SGTTNAIFSAFTLITKKFEE 91
>gi|348511523|ref|XP_003443293.1| PREDICTED: poly(rC)-binding protein 3-like [Oreochromis niloticus]
Length = 321
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 67/123 (54%), Gaps = 6/123 (4%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMRH 109
+ +LL H +VGS+IGK G V+ + E+GA I I++ + ERIV I+ ++ +
Sbjct: 16 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE--GNCPERIVTITGPTDTIFK- 72
Query: 110 SPAQDAVMRVHSRIAEIGFEPGQA---VVARLLVHSQQIGCLLGRGGHIVSEMRRATGAS 166
+ A A I + P + V RL+V + Q G L+G+GG + EMR +TGA
Sbjct: 73 AFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEMRESTGAQ 132
Query: 167 IRV 169
++V
Sbjct: 133 VQV 135
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 79/328 (24%), Positives = 125/328 (38%), Gaps = 63/328 (19%)
Query: 133 AVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNY 192
+ RLL+H +++G ++G+ G V +MR +GA I + G+ + IV + G
Sbjct: 15 TLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE-------GNCPERIVTITGPT 67
Query: 193 HSVQDALFHITSRLRETIFPMKRPGPNNGHSYLPPFPEMPPPPFRPRHNPASPGSYPSPV 252
++ A I + E I N S P + PP R + GS +
Sbjct: 68 DTIFKAFAMIAYKFEEDII--------NSMSNSPATSK-PPVTLRLVVPASQCGSL---I 115
Query: 253 GPFHSMDRGMGPSQPFDHQAAFSHGMDPMVPPNSDRIPFPYGS----------------E 296
G S + M S Q A M+P +++R G+ E
Sbjct: 116 GKGGSKIKEMRESTGAQVQVA-----GDMLPNSTERAVTISGTPEAIIQCVRQICVVMLE 170
Query: 297 RPGHGPTFDRPPSPRSWTPQGVGGGDPRGFDASSG-------------------FTP--R 335
P G T P P S TP GG FTP +
Sbjct: 171 SPPKGATIPYRPKPTS-TPVIFSGGQAYTIQGQYAIPHPDQLTKLHQLAMQQTPFTPLGQ 229
Query: 336 NRPVESGNHAAILTSTTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATE 395
P G A+ ST E+ IP + + G + ++ IRQ+SGA + + + G++E
Sbjct: 230 TTPAFPGLDASPPASTH-ELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANAMEGSSE 288
Query: 396 GVVMVSGTSDQMRAAQSLIHAFILCGVT 423
+ ++GT + AQ LI+A + VT
Sbjct: 289 RQITITGTPANISLAQYLINARLTSEVT 316
>gi|256079872|ref|XP_002576208.1| rna-binding protein related [Schistosoma mansoni]
gi|353231011|emb|CCD77429.1| rna-binding protein related [Schistosoma mansoni]
Length = 666
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 87/196 (44%), Gaps = 41/196 (20%)
Query: 52 FKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIAD---ILPDSEERIVVISARENSEMR 108
FK+L G++IGKGG + QN+T A +K++ P + ER+ +I
Sbjct: 45 FKILVPSIAAGAIIGKGGEAITEIQNQTSAKVKMSKANAFYPGTTERVCLIVG------- 97
Query: 109 HSPAQDAVMRVHSRIAEIGFEPGQAV---------------VARLLVHSQQIGCLLGRGG 153
++++RV I+E +E ++V ++LV + G ++G+GG
Sbjct: 98 ---TIESILRVFQYISEKIYEKPESVPKTGCEGRVLTERHKQVKILVPNSTAGMIIGKGG 154
Query: 154 HIVSEMRRATGASIRVFPKDQ----APRCGSPHDEIVQVIGNYHSVQDALFHITSRLRET 209
+ E++ TG I+V K + A RC V V G +DA+ I S++ E
Sbjct: 155 SFIKELKDTTGVFIQVSQKSKELNLAERC-------VTVAGELSQTRDAIALILSKIAED 207
Query: 210 IFPMKRPGPNNGHSYL 225
P PN +S +
Sbjct: 208 --PQSSSCPNISYSEI 221
>gi|256083125|ref|XP_002577800.1| heterogeneous nuclear ribonucleoprotein [Schistosoma mansoni]
gi|353230298|emb|CCD76469.1| putative heterogeneous nuclear ribonucleoprotein k [Schistosoma
mansoni]
Length = 371
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 75/170 (44%), Gaps = 38/170 (22%)
Query: 49 EVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSE--ERIVVISA----- 101
+V + L G +IGKGG ++ + E S+K+ +PDS ER++V+
Sbjct: 8 KVELRFLISTKAAGVIIGKGGENIKKIREE--YSVKVT--IPDSNGPERVLVLDGDLGSV 63
Query: 102 ----RENSEMRHSPAQDAVMRVHSRIAEIGFEPGQAVVARLLVHSQQIGCLLGRGGHIVS 157
REN E S D V RLLVH Q GC++GR G+ +
Sbjct: 64 IEIFRENLEKMQSNRDDGVD------------------LRLLVHQSQAGCVIGRAGYKIK 105
Query: 158 EMRRATGA-SIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRL 206
E+R +G +++V+ C D ++Q++G+ V D L I L
Sbjct: 106 ELREQSGLHTLKVYQM----LCPCSTDRVIQLVGDVGKVLDCLRSIAELL 151
Score = 38.9 bits (89), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 17/74 (22%), Positives = 43/74 (58%), Gaps = 1/74 (1%)
Query: 346 AILT-STTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATEGVVMVSGTS 404
+ILT +T+ +V + + + G + ++ +R S A++ ++ +PG + ++ ++GT
Sbjct: 291 SILTPTTSTQVSVSNKMIGAIMGRSGCRINQVRHESNADIKISKQEPGVEDRIITITGTP 350
Query: 405 DQMRAAQSLIHAFI 418
+Q++ AQ L+ +
Sbjct: 351 EQIQNAQFLLQMCV 364
>gi|348519763|ref|XP_003447399.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2-like
isoform 4 [Oreochromis niloticus]
Length = 584
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/175 (31%), Positives = 92/175 (52%), Gaps = 22/175 (12%)
Query: 47 EEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADIL-PDSEERIVVISARENS 105
E+EVV+ L VG+LIGK G ++ + GASIKIA PD ER+V+I+ +
Sbjct: 409 EQEVVY-LFIPTQAVGALIGKKGQHIKQLAHFAGASIKIAPAESPDVTERMVIITGTPEA 467
Query: 106 EMRHSPAQDAVMRVHSRIAEIGFEPGQAVVARLLVH----SQQIGCLLGRGGHIVSEMRR 161
+ + A R+ ++ E F + V +L H S G ++G+GG V+E++
Sbjct: 468 QFK------AQGRIFGKLKEENFFSAKEEV-KLETHIKVPSSAAGRVIGKGGKTVNELQN 520
Query: 162 ATGASIRVFPKDQAPRCGSPHDEI-VQVIGNYHSVQDALFHITSRLRETIFPMKR 215
T A + + P+DQ P +DE+ V++ G++ + Q A ++RE I +K+
Sbjct: 521 LTSAEV-IVPRDQTP---DENDEVFVKISGHFFASQTA----QRKIREIIQQVKQ 567
>gi|427784321|gb|JAA57612.1| Putative polyc-binding hnrnp-k protein hrb57a/hnrnp [Rhipicephalus
pulchellus]
Length = 334
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 84/184 (45%), Gaps = 11/184 (5%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENS--EM 107
V + L G++IGKGGS + + + E ASI + D ERI+ I A ++ E+
Sbjct: 38 VDVRFLLQSRNAGAIIGKGGSNINSLRKEFKASISVPDC--PGPERILSIVADLDTLGEI 95
Query: 108 RHSPAQDAVMRVHSRIAEIGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASI 167
+ R G G RLL+H GC++GR G + E+R +TGA+I
Sbjct: 96 LLNIIPKLDDRSMQFAQHTGQNGGSESEMRLLMHQSHAGCIIGRAGCRIKELRESTGANI 155
Query: 168 RVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMK-RPGPNNGHSYLP 226
+V C + IV+V G+ V D + I + + P+K P + H++ P
Sbjct: 156 KV----HGSCCPGSTERIVKVTGSPSVVVDCIKQICDIV--GVAPIKGLNKPYDPHNFDP 209
Query: 227 PFPE 230
F +
Sbjct: 210 EFAQ 213
Score = 41.6 bits (96), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 47/93 (50%), Gaps = 7/93 (7%)
Query: 131 GQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAPRCGSPHDEIVQVIG 190
G+AV R L+ S+ G ++G+GG ++ +R+ ASI V P C P + I+ ++
Sbjct: 35 GRAVDVRFLLQSRNAGAIIGKGGSNINSLRKEFKASISV------PDCPGP-ERILSIVA 87
Query: 191 NYHSVQDALFHITSRLRETIFPMKRPGPNNGHS 223
+ ++ + L +I +L + + NG S
Sbjct: 88 DLDTLGEILLNIIPKLDDRSMQFAQHTGQNGGS 120
>gi|335289843|ref|XP_003127279.2| PREDICTED: RNA-binding protein Nova-2 [Sus scrofa]
Length = 492
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 83/192 (43%), Gaps = 37/192 (19%)
Query: 41 RNRMFYEEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIA---DILPDSEERIV 97
R+ E E K+L GS+IGKGG + Q ETGA+IK++ D P + ER+
Sbjct: 24 RSNTGEEGEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVC 83
Query: 98 VISARENSEMRHSPAQDAVMRVHSRIAE---------------------IGFEPGQAVVA 136
++ +A+ VHS IAE P +A A
Sbjct: 84 LVQG----------TAEALNAVHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQA 133
Query: 137 RLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQ 196
+L+V + G ++G+GG V + +GA +++ Q P + + +V V G V
Sbjct: 134 KLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQL---SQKPEGINLQERVVTVSGEPEQVH 190
Query: 197 DALFHITSRLRE 208
A+ I +++E
Sbjct: 191 KAVSAIVQKVQE 202
>gi|291415485|ref|XP_002723980.1| PREDICTED: neuro-oncological ventral antigen 2 [Oryctolagus
cuniculus]
Length = 492
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 83/192 (43%), Gaps = 37/192 (19%)
Query: 41 RNRMFYEEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIA---DILPDSEERIV 97
R+ E E K+L GS+IGKGG + Q ETGA+IK++ D P + ER+
Sbjct: 24 RSNTGEEGEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVC 83
Query: 98 VISARENSEMRHSPAQDAVMRVHSRIAE---------------------IGFEPGQAVVA 136
++ +A+ VHS IAE P +A A
Sbjct: 84 LVQG----------TAEALNAVHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQA 133
Query: 137 RLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQ 196
+L+V + G ++G+GG V + +GA +++ Q P + + +V V G V
Sbjct: 134 KLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQL---SQKPEGINLQERVVTVSGEPEQVH 190
Query: 197 DALFHITSRLRE 208
A+ I +++E
Sbjct: 191 KAVSAIVQKVQE 202
>gi|329663502|ref|NP_001193038.1| RNA-binding protein Nova-2 [Bos taurus]
Length = 492
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 83/192 (43%), Gaps = 37/192 (19%)
Query: 41 RNRMFYEEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIA---DILPDSEERIV 97
R+ E E K+L GS+IGKGG + Q ETGA+IK++ D P + ER+
Sbjct: 24 RSNTGEEGEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVC 83
Query: 98 VISARENSEMRHSPAQDAVMRVHSRIAE---------------------IGFEPGQAVVA 136
++ +A+ VHS IAE P +A A
Sbjct: 84 LVQG----------TAEALNAVHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQA 133
Query: 137 RLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQ 196
+L+V + G ++G+GG V + +GA +++ Q P + + +V V G V
Sbjct: 134 KLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQL---SQKPEGINLQERVVTVSGEPEQVH 190
Query: 197 DALFHITSRLRE 208
A+ I +++E
Sbjct: 191 KAVSAIVQKVQE 202
>gi|5902724|ref|NP_002507.1| RNA-binding protein Nova-2 [Homo sapiens]
gi|33516944|sp|Q9UNW9.1|NOVA2_HUMAN RecName: Full=RNA-binding protein Nova-2; AltName: Full=Astrocytic
NOVA1-like RNA-binding protein; AltName:
Full=Neuro-oncological ventral antigen 2
gi|3851553|gb|AAC72355.1| RNA-binding protein Nova-2 [Homo sapiens]
gi|195934809|gb|AAI68367.1| Neuro-oncological ventral antigen 2 [synthetic construct]
Length = 492
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 83/192 (43%), Gaps = 37/192 (19%)
Query: 41 RNRMFYEEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIA---DILPDSEERIV 97
R+ E E K+L GS+IGKGG + Q ETGA+IK++ D P + ER+
Sbjct: 24 RSNTGEEGEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVC 83
Query: 98 VISARENSEMRHSPAQDAVMRVHSRIAE---------------------IGFEPGQAVVA 136
++ +A+ VHS IAE P +A A
Sbjct: 84 LVQG----------TAEALNAVHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQA 133
Query: 137 RLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQ 196
+L+V + G ++G+GG V + +GA +++ Q P + + +V V G V
Sbjct: 134 KLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQL---SQKPEGINLQERVVTVSGEPEQVH 190
Query: 197 DALFHITSRLRE 208
A+ I +++E
Sbjct: 191 KAVSAIVQKVQE 202
>gi|45553235|ref|NP_996145.1| mushroom-body expressed, isoform C [Drosophila melanogaster]
gi|194876029|ref|XP_001973701.1| GG16232 [Drosophila erecta]
gi|195496648|ref|XP_002095782.1| GE22592 [Drosophila yakuba]
gi|16648354|gb|AAL25442.1| LD32520p [Drosophila melanogaster]
gi|45446078|gb|AAS65095.1| mushroom-body expressed, isoform C [Drosophila melanogaster]
gi|190655484|gb|EDV52727.1| GG16232 [Drosophila erecta]
gi|194181883|gb|EDW95494.1| GE22592 [Drosophila yakuba]
gi|220951950|gb|ACL88518.1| mub-PC [synthetic construct]
Length = 364
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 78/161 (48%), Gaps = 7/161 (4%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMR- 108
+ +L+ +VGS+IGK G IV F+ E+GA I I+D ERIV +S N+
Sbjct: 24 LTIRLIMQGKEVGSIIGKKGEIVNRFREESGAKINISD--GSCPERIVTVSGTTNAIFSA 81
Query: 109 HSPAQDAVMRVHSRIAEIGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIR 168
+ S+ ++G + RL+V + Q G L+G+ G + E+R+ TG SI+
Sbjct: 82 FTLITKKFEEWCSQFNDVGKVGKTQIPIRLIVPASQCGSLIGKSGSKIKEIRQTTGCSIQ 141
Query: 169 VFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRET 209
V + P + + V + G+ + ++ I + E+
Sbjct: 142 V-ASEMLP---NSTERAVTLSGSAEQITQCIYQICLVMLES 178
Score = 44.7 bits (104), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 51/99 (51%), Gaps = 8/99 (8%)
Query: 137 RLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQ 196
+ V + IGC++G+GG ++E+R+ +GA IR+ ++ R G D + + GN SV
Sbjct: 271 EMTVSNDLIGCIIGKGGTKIAEIRQISGAMIRISNCEE--REGGNTDRTITISGNPDSVA 328
Query: 197 DALFHITSRLRETIFPMKRPG-PNNGHSYLPPFPEMPPP 234
A + I R+ M+ G P G+ Y+ P + P
Sbjct: 329 LAQYLINMRI-----SMETAGLPIPGYHYIAPSAIVKTP 362
Score = 42.4 bits (98), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Query: 47 EEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIA-DILPDSEERIVVIS 100
+ ++ +L+ + GSLIGK GS ++ + TG SI++A ++LP+S ER V +S
Sbjct: 104 KTQIPIRLIVPASQCGSLIGKSGSKIKEIRQTTGCSIQVASEMLPNSTERAVTLS 158
Score = 40.8 bits (94), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 40/80 (50%), Gaps = 7/80 (8%)
Query: 129 EPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAPRCGSPHDEIVQV 188
+P + RL++ +++G ++G+ G IV+ R +GA I + GS + IV V
Sbjct: 19 DPSVTLTIRLIMQGKEVGSIIGKKGEIVNRFREESGAKINISD-------GSCPERIVTV 71
Query: 189 IGNYHSVQDALFHITSRLRE 208
G +++ A IT + E
Sbjct: 72 SGTTNAIFSAFTLITKKFEE 91
>gi|270007202|gb|EFA03650.1| hypothetical protein TcasGA2_TC013744 [Tribolium castaneum]
Length = 710
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 98/205 (47%), Gaps = 24/205 (11%)
Query: 23 GYHSRGYSSG----PGHETVGGRNRMFYEEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNE 78
GY SRG +G PG G +E + L + VG++IG GS +R
Sbjct: 471 GYGSRGLYTGQAPYPGMYPAGAAQGGGDSQETTY-LYIPNNAVGAIIGTKGSHIRNIIRF 529
Query: 79 TGASIKIADI------LPDSEERIVVISARENSEMRHSPAQDAVMRVHSRIAEIGFEPGQ 132
+GAS+KIA I +E R+ ++ + E A + ++ E GF G
Sbjct: 530 SGASVKIAPIDETKPQETQNERRVTIVGSPE-------AQWKAQYLIFEKMREEGFVAGS 582
Query: 133 A---VVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAPRCGSPHDEIVQVI 189
+ ++V S Q+G ++G+GG V E++R TG+ I++ + +P+ + V +I
Sbjct: 583 DDVRLTVEIMVPSSQVGRIIGKGGQNVRELQRVTGSVIKLPEQGASPQ---EDETTVHII 639
Query: 190 GNYHSVQDALFHITSRLRETIFPMK 214
G + SVQ A I + + +++ P++
Sbjct: 640 GPFFSVQSAQRRIRAMVLQSVVPLQ 664
Score = 46.2 bits (108), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 37/160 (23%), Positives = 75/160 (46%), Gaps = 10/160 (6%)
Query: 52 FKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKI--ADILPDSEERIVVISARENSEMRH 109
++L D VG++IG+ GS +R +T A + + D + E+ I + EN
Sbjct: 290 LRILVQSDMVGAIIGRQGSTIRQITQQTRARVDVHRKDNVGSLEKAITIYGNPENC---- 345
Query: 110 SPAQDAVMRVHSRIAEIGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRV 169
+ A ++ V + A G+ + ++L H+ IG ++G+GG+ + + + T I V
Sbjct: 346 TNACKRILEVMQQEAN-NTNKGE-ICLKILAHNNLIGRIIGKGGNTIKRIMQETDTKITV 403
Query: 170 FPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRET 209
+ + I+ V G ++ A I+++LR++
Sbjct: 404 SSINDINSFN--LERIITVKGAIDNMSRAEAQISAKLRQS 441
Score = 45.8 bits (107), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 45/212 (21%), Positives = 86/212 (40%), Gaps = 49/212 (23%)
Query: 49 EVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIA---DILPDSEERIVVIS----- 100
E+ K+L H + +G +IGKGG+ ++ ET I ++ DI + ERI+ +
Sbjct: 367 EICLKILAHNNLIGRIIGKGGNTIKRIMQETDTKITVSSINDINSFNLERIITVKGAIDN 426
Query: 101 -----ARENSEMRHSPAQD----------------AVMRVHSRI--AEIGFEPGQA---- 133
A+ ++++R S D M + I G GQA
Sbjct: 427 MSRAEAQISAKLRQSYENDLQAMAPQTMMFPGLHPMAMMATAGIGYGSRGLYTGQAPYPG 486
Query: 134 --------------VVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAPRCG 179
L + + +G ++G G + + R +GAS+++ P D+
Sbjct: 487 MYPAGAAQGGGDSQETTYLYIPNNAVGAIIGTKGSHIRNIIRFSGASVKIAPIDETKPQE 546
Query: 180 SPHDEIVQVIGNYHSVQDALFHITSRLRETIF 211
+ ++ V ++G+ + A + I ++RE F
Sbjct: 547 TQNERRVTIVGSPEAQWKAQYLIFEKMREEGF 578
>gi|357437527|ref|XP_003589039.1| Far upstream element-binding protein [Medicago truncatula]
gi|355478087|gb|AES59290.1| Far upstream element-binding protein [Medicago truncatula]
Length = 605
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 96/225 (42%), Gaps = 38/225 (16%)
Query: 53 KLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIA---DILPDSEERIVVISARENSEMRH 109
K+ +VG +IGKGG ++ Q ++GA I++ D P+S R+V ++
Sbjct: 115 KIEIPNGRVGVIIGKGGETIKYLQLQSGAKIQVTRDMDADPNSPNRLVELTGTS------ 168
Query: 110 SPAQDAVMRVHSRIAEIGFEP---GQAVVAR------------LLVHSQQIGCLLGRGGH 154
DA+ I E+ E G +V R + + + ++G ++G+GG
Sbjct: 169 ----DAIATAEKLIKEVLAEAESGGNGLVTRRMTGQGGADEFSMKIPNNKVGLIIGKGGE 224
Query: 155 IVSEMRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQ------DALFHITSRLRE 208
+ M+ TGA I+V P P S + +++ G ++ D++ +RLR
Sbjct: 225 TIKSMQATTGARIQVIPLHLPPGDTS-TERTLKIEGTSEQIESAKQLVDSILSGENRLRN 283
Query: 209 TIFPMKRPGPNNGHSYLPPFPEMPPPPF-RPRHNPASPGSYPSPV 252
M G+ PP PP +P + A PG+YP P
Sbjct: 284 PS--MSGGYSQQGYQARPPSSWAPPAASQQPGYGYAQPGAYPGPT 326
>gi|395854336|ref|XP_003799652.1| PREDICTED: RNA-binding protein Nova-2, partial [Otolemur garnettii]
Length = 487
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 83/192 (43%), Gaps = 37/192 (19%)
Query: 41 RNRMFYEEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIA---DILPDSEERIV 97
R+ E E K+L GS+IGKGG + Q ETGA+IK++ D P + ER+
Sbjct: 19 RSNTGEEGEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVC 78
Query: 98 VISARENSEMRHSPAQDAVMRVHSRIAE---------------------IGFEPGQAVVA 136
++ +A+ VHS IAE P +A A
Sbjct: 79 LVQG----------TAEALNAVHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQA 128
Query: 137 RLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQ 196
+L+V + G ++G+GG V + +GA +++ Q P + + +V V G V
Sbjct: 129 KLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQL---SQKPEGINLQERVVTVSGEPEQVH 185
Query: 197 DALFHITSRLRE 208
A+ I +++E
Sbjct: 186 KAVSAIVQKVQE 197
>gi|308499839|ref|XP_003112105.1| hypothetical protein CRE_29640 [Caenorhabditis remanei]
gi|308268586|gb|EFP12539.1| hypothetical protein CRE_29640 [Caenorhabditis remanei]
Length = 721
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 91/380 (23%), Positives = 156/380 (41%), Gaps = 67/380 (17%)
Query: 53 KLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMRHSPA 112
+LL G++IGKGG ++ + E A +++ D ++ ER+ ++A E + + +
Sbjct: 375 RLLVSSKSAGAIIGKGGENIKRLRAEFNAHVQVPD--SNTPERVCTVTADEKTVL--NIL 430
Query: 113 QDAVMRVHSRIAEIGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPK 172
+D + R+ +E +P + R+L+H G L+GR G + E+R A +++F
Sbjct: 431 RDVLPRLEDNFSE--RDPCEV---RMLIHQSHAGALIGRNGTKIKELREKCSARLKIFT- 484
Query: 173 DQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKRPGPNNGHSYLPPFPEMP 232
AP GS D ++ G +V + + L+E P + YLP F P
Sbjct: 485 GCAP--GST-DRVLITSGEQKNVLAIIEEVMKELKEI------PIKGSSTPYLPSFHYDP 535
Query: 233 PPPFRPRHNPASPGSYP---SPVGPFHSMDRGMGPSQPFDHQAAFSHGMDPMVPPNSDRI 289
N + G +P S GP +S GP+ P Q
Sbjct: 536 S-------NISEYGGFPGNLSSGGPQNS----RGPAPPRGGQG----------------- 567
Query: 290 PFPYGSERPGHGPTFDRPPSPRSWTP---QGVGGGDPRGFDASS-GFTPRNRPVESGNHA 345
P G +R G PRS+ Q GG G+ ++ G+ P+ + +A
Sbjct: 568 --PAGGQRSYGGGAITPGGGPRSFESGDFQQFRGGPMPGYAMNAPGYAPQQGQFGAPANA 625
Query: 346 ----------AILTSTTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATE 395
+ T+ V IP + G ++ IRQ SGA + + +P G E
Sbjct: 626 GYGYGPGGGGPVTTAQVSFVTIPSDLGGTIIGRGGERIARIRQESGAQITL-EPSTGQPE 684
Query: 396 GVVMVSGTSDQMRAAQSLIH 415
++ + GT Q+ +AQ L+
Sbjct: 685 RIITIKGTEPQIHSAQYLLQ 704
>gi|432931637|ref|XP_004081712.1| PREDICTED: poly(rC)-binding protein 3-like isoform 1 [Oryzias
latipes]
Length = 321
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 67/123 (54%), Gaps = 6/123 (4%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMRH 109
+ +LL H +VGS+IGK G V+ + E+GA I I++ + ERIV I+ ++ +
Sbjct: 16 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE--GNCPERIVTITGPTDTIFK- 72
Query: 110 SPAQDAVMRVHSRIAEIGFEPGQA---VVARLLVHSQQIGCLLGRGGHIVSEMRRATGAS 166
+ A A I + P + V RL+V + Q G L+G+GG + EMR +TGA
Sbjct: 73 AFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEMRESTGAQ 132
Query: 167 IRV 169
++V
Sbjct: 133 VQV 135
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 80/328 (24%), Positives = 125/328 (38%), Gaps = 63/328 (19%)
Query: 133 AVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNY 192
+ RLL+H +++G ++G+ G V +MR +GA I + G+ + IV + G
Sbjct: 15 TLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE-------GNCPERIVTITGPT 67
Query: 193 HSVQDALFHITSRLRETIFPMKRPGPNNGHSYLPPFPEMPPPPFRPRHNPASPGSYPSPV 252
++ A I + E I N S P + PP R + GS +
Sbjct: 68 DTIFKAFAMIAYKFEEDII--------NSMSNSPATSK-PPVTLRLVVPASQCGSL---I 115
Query: 253 GPFHSMDRGMGPSQPFDHQAAFSHGMDPMVPPNSDRIPFPYGS----------------E 296
G S + M S Q A M+P +++R G+ E
Sbjct: 116 GKGGSKIKEMRESTGAQVQVA-----GDMLPNSTERAVTISGTPEAIIQCVKQICVVMLE 170
Query: 297 RPGHGPTFDRPPSPRSWTPQGVGGGDPRGFDASSG-------------------FTP--R 335
P G T P P S TP GG FTP +
Sbjct: 171 SPPKGATIPYRPKPAS-TPVIFSGGQAYTIQGQYAIPHPDQLTKLHQLAMQQTPFTPLGQ 229
Query: 336 NRPVESGNHAAILTSTTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATE 395
P G AA ST E+ IP + + G + ++ IRQ+SGA + + + G++E
Sbjct: 230 TTPAFPGLDAAPPASTH-ELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANAMEGSSE 288
Query: 396 GVVMVSGTSDQMRAAQSLIHAFILCGVT 423
+ ++GT + AQ LI+A + VT
Sbjct: 289 RQITITGTPANISLAQYLINARLTSEVT 316
>gi|119577801|gb|EAW57397.1| neuro-oncological ventral antigen 2 [Homo sapiens]
Length = 556
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 83/192 (43%), Gaps = 37/192 (19%)
Query: 41 RNRMFYEEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIA---DILPDSEERIV 97
R+ E E K+L GS+IGKGG + Q ETGA+IK++ D P + ER+
Sbjct: 88 RSNTGEEGEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVC 147
Query: 98 VISARENSEMRHSPAQDAVMRVHSRIAE---------------------IGFEPGQAVVA 136
++ +A+ VHS IAE P +A A
Sbjct: 148 LVQG----------TAEALNAVHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQA 197
Query: 137 RLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQ 196
+L+V + G ++G+GG V + +GA +++ Q P + + +V V G V
Sbjct: 198 KLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQL---SQKPEGINLQERVVTVSGEPEQVH 254
Query: 197 DALFHITSRLRE 208
A+ I +++E
Sbjct: 255 KAVSAIVQKVQE 266
>gi|410970835|ref|XP_003991882.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2
isoform 1 [Felis catus]
Length = 536
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 82/157 (52%), Gaps = 13/157 (8%)
Query: 46 YEEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADIL-PDSEERIVVISAREN 104
Y E+ + L VG++IGK G+ ++ GASIKIA PD ER+V+I+
Sbjct: 361 YPEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITGPPE 420
Query: 105 SEMRHSPAQDAVMRVHSRIAEIG-FEPGQAVV--ARLLVHSQQIGCLLGRGGHIVSEMRR 161
++ + A R+ ++ E F P + V A + V S G ++G+GG V+E++
Sbjct: 421 AQFK------AQGRIFGKLKEENFFNPKEEVKLEAHIRVPSSTAGRVIGKGGKTVNELQN 474
Query: 162 ATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDA 198
T A + + P+DQ P + IV++IG++ + Q A
Sbjct: 475 LTSAEV-IVPRDQTP--DENEEVIVRIIGHFFASQTA 508
>gi|348519759|ref|XP_003447397.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2-like
isoform 2 [Oreochromis niloticus]
Length = 581
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/175 (31%), Positives = 92/175 (52%), Gaps = 22/175 (12%)
Query: 47 EEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADIL-PDSEERIVVISARENS 105
E+EVV+ L VG+LIGK G ++ + GASIKIA PD ER+V+I+ +
Sbjct: 406 EQEVVY-LFIPTQAVGALIGKKGQHIKQLAHFAGASIKIAPAESPDVTERMVIITGTPEA 464
Query: 106 EMRHSPAQDAVMRVHSRIAEIGFEPGQAVVARLLVH----SQQIGCLLGRGGHIVSEMRR 161
+ + A R+ ++ E F + V +L H S G ++G+GG V+E++
Sbjct: 465 QFK------AQGRIFGKLKEENFFSAKEEV-KLETHIKVPSSAAGRVIGKGGKTVNELQN 517
Query: 162 ATGASIRVFPKDQAPRCGSPHDEI-VQVIGNYHSVQDALFHITSRLRETIFPMKR 215
T A + + P+DQ P +DE+ V++ G++ + Q A ++RE I +K+
Sbjct: 518 LTSAEV-IVPRDQTP---DENDEVFVKISGHFFASQTA----QRKIREIIQQVKQ 564
>gi|328702411|ref|XP_003241892.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K-like isoform 2
[Acyrthosiphon pisum]
Length = 428
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 78/170 (45%), Gaps = 15/170 (8%)
Query: 48 EEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEM 107
+++ ++L GS+IGKGG + + + A++ + D P E + +IS+ +N+
Sbjct: 23 DDIELRVLIPSKVAGSIIGKGGFNISRLRTDYNATVTVPD-CPGPERILTIISSNDNALK 81
Query: 108 RHSPAQDAVMRVHSRIAEIGFEPGQA----------VVARLLVHSQQIGCLLGRGGHIVS 157
+ SR G GQ V R+LVH Q GC++G+GG V
Sbjct: 82 VLGEVMGNLEDGGSRFKRGGAGGGQGNNDNQGGETDVDVRMLVHQSQAGCIIGKGGLKVK 141
Query: 158 EMRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLR 207
E+R TG+ I+++ C D +VQ+ G ++ D + + L+
Sbjct: 142 ELREKTGSRIKIY----TSCCPMSTDRVVQITGKPNTCSDCVREVLDLLK 187
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 43/78 (55%), Gaps = 2/78 (2%)
Query: 341 SGNHAAILTSTTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATEGVVMV 400
+G AA ST +V IP+ + G+ + + IRQ SGA + + +P G+ E ++ +
Sbjct: 339 AGKPAAFNGST--QVTIPKDLAGAIIGKAGARIRRIRQDSGAGITIGEPTEGSDERIITI 396
Query: 401 SGTSDQMRAAQSLIHAFI 418
+GT Q++ AQ L+ +
Sbjct: 397 NGTDSQIQMAQYLLQQCV 414
>gi|357621941|gb|EHJ73587.1| hypothetical protein KGM_22691 [Danaus plexippus]
Length = 431
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 85/187 (45%), Gaps = 24/187 (12%)
Query: 60 KVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMR-HSPAQDAVMR 118
+VGS+IGK G IV+ F+ E+GA I I+D ERIV ++ +S + +
Sbjct: 5 EVGSIIGKKGEIVKRFREESGAKINISD--GSCPERIVTVTGNTSSIFKAFTLICKKFEE 62
Query: 119 VHSRIAEIGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAPRC 178
S+ E G + RL+V + Q G L+G+GG + E+R TG R++ +
Sbjct: 63 WCSQFNEGGGGSRAPITLRLIVPASQCGSLIGKGGSKIKEIRDVTG---RLYVHVASEML 119
Query: 179 GSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKRPGPNNGHSYLPPFPEMPPPPFRP 238
+ + V + G ++ ++HI + E+ P G + P+RP
Sbjct: 120 PNSTERAVTISGTCDAITQCIYHICCVMLES--------PPKGATI----------PYRP 161
Query: 239 RHNPASP 245
+ N A P
Sbjct: 162 KPNVAGP 168
Score = 41.2 bits (95), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 39/65 (60%), Gaps = 2/65 (3%)
Query: 138 LLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQD 197
+ V ++ IGC++G+GG ++E+R+ +GA IR+ ++ R G D + + GN SV
Sbjct: 282 MTVPNELIGCIIGKGGTKIAEIRQISGAMIRISNCEE--REGGSTDRTITISGNPDSVAL 339
Query: 198 ALFHI 202
A + I
Sbjct: 340 AQYLI 344
Score = 39.3 bits (90), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 39/68 (57%), Gaps = 3/68 (4%)
Query: 354 EVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKP---GATEGVVMVSGTSDQMRAA 410
E+ +P + + G+ + ++ IRQISGA + +++ + G+T+ + +SG D + A
Sbjct: 281 EMTVPNELIGCIIGKGGTKIAEIRQISGAMIRISNCEEREGGSTDRTITISGNPDSVALA 340
Query: 411 QSLIHAFI 418
Q LI+ +
Sbjct: 341 QYLINMSV 348
>gi|345309017|ref|XP_001516066.2| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2-like
[Ornithorhynchus anatinus]
Length = 679
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 81/155 (52%), Gaps = 13/155 (8%)
Query: 48 EEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADIL-PDSEERIVVISARENSE 106
E+ V L VG++IGK G ++ GASIKIA PD+ ER+V+I+ ++
Sbjct: 504 EQEVVNLFIPTQAVGAIIGKKGQHIKQLARFAGASIKIAPAEGPDASERMVIITGPPEAQ 563
Query: 107 MRHSPAQDAVMRVHSRIAEIG-FEPGQAVV--ARLLVHSQQIGCLLGRGGHIVSEMRRAT 163
+ A R+ ++ E F P + V A + V S G ++G+GG V+E++ T
Sbjct: 564 FK------AQGRIFGKLKEENFFNPKEEVKLEAHIKVPSSAAGRVIGKGGKTVNELQNLT 617
Query: 164 GASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDA 198
A + + P+DQ P + IV++IG++ + Q A
Sbjct: 618 SAEV-IVPRDQTP--DENEEVIVKIIGHFFASQTA 649
Score = 40.0 bits (92), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 35/159 (22%), Positives = 75/159 (47%), Gaps = 9/159 (5%)
Query: 52 FKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKI--ADILPDSEERIVVISARENSEMRH 109
++L VG++IGK G ++ +T + + I + +E+ I + + E S
Sbjct: 274 LRILVPTQFVGAIIGKEGLTIKNLTKQTQSKVDIHRKENAGAAEKPITIHATPEGS---- 329
Query: 110 SPAQDAVMRVHSRIAEIGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRV 169
S A ++ + + A+ + + + ++L H+ +G L+G+ G + ++ + TG I +
Sbjct: 330 SEACRLILEIMQKEAD-ETKSAEEIPLKILAHNSLVGRLIGKEGRNLKKIEQDTGTKITI 388
Query: 170 FPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRE 208
P Q +P + + V G+ + +A I +LRE
Sbjct: 389 SPL-QDLTIYNP-ERTITVKGSIEACSNAEVEIMKKLRE 425
>gi|219886695|gb|ACL53722.1| unknown [Zea mays]
Length = 702
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 80/179 (44%), Gaps = 23/179 (12%)
Query: 48 EEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIA-DILPDSEERIVVISARENSE 106
+E+ K+ KVG +IGK G +R Q +GA I+I DI DS + E
Sbjct: 142 QEISRKIEVPNSKVGVVIGKAGETIRNLQISSGAKIQITKDIEADSNALTRPV------E 195
Query: 107 MRHSPA--QDAVMRVHSRIAEIGFEPGQAVVAR-------------LLVHSQQIGCLLGR 151
+ +P A + S IAE A++AR + V ++G ++G+
Sbjct: 196 LVGTPGSVDKAEQLIKSVIAEAEAGGSPALIARGFGSGQPGSEQFEMTVPDNKVGLIIGK 255
Query: 152 GGHIVSEMRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETI 210
GG + M+ +GA I++ P+ P + + IV+V GN ++ A I + +T
Sbjct: 256 GGETIKGMQTKSGARIQLIPQ-HPPEGVTLTERIVRVTGNKKQIEAAKDLIKQAMNQTF 313
>gi|148665207|gb|EDK97623.1| insulin-like growth factor 2 mRNA binding protein 2, isoform CRA_d
[Mus musculus]
Length = 603
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 89/174 (51%), Gaps = 17/174 (9%)
Query: 46 YEEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADIL-PDSEERIVVISAREN 104
Y E+ L VG++IGK G+ ++ GASIKIA PD ER+V+I+
Sbjct: 428 YPEQETVSLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITGPPE 487
Query: 105 SEMRHSPAQDAVMRVHSRIAEIG-FEPGQAVV--ARLLVHSQQIGCLLGRGGHIVSEMRR 161
++ + A R+ ++ E F P + V A + V S G ++G+GG V+E++
Sbjct: 488 AQFK------AQGRIFGKLKEENFFNPKEEVKLEAHIRVPSSTAGRVIGKGGKTVNELQN 541
Query: 162 ATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKR 215
T A + + P+DQ P + IV++IG++ + Q A ++RE + +K+
Sbjct: 542 LTSAEV-IVPRDQTP--DENEEVIVRIIGHFFASQTA----QRKIREIVQQVKQ 588
>gi|432931639|ref|XP_004081713.1| PREDICTED: poly(rC)-binding protein 3-like isoform 2 [Oryzias
latipes]
Length = 343
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 67/123 (54%), Gaps = 6/123 (4%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMRH 109
+ +LL H +VGS+IGK G V+ + E+GA I I++ + ERIV I+ ++ +
Sbjct: 16 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE--GNCPERIVTITGPTDTIFK- 72
Query: 110 SPAQDAVMRVHSRIAEIGFEPGQA---VVARLLVHSQQIGCLLGRGGHIVSEMRRATGAS 166
+ A A I + P + V RL+V + Q G L+G+GG + EMR +TGA
Sbjct: 73 AFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEMRESTGAQ 132
Query: 167 IRV 169
++V
Sbjct: 133 VQV 135
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 35/52 (67%), Gaps = 1/52 (1%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIA-DILPDSEERIVVIS 100
V +L+ + GSLIGKGGS ++ + TGA +++A D+LP+S ER V IS
Sbjct: 100 VTLRLVVPASQCGSLIGKGGSKIKEMRESTGAQVQVAGDMLPNSTERAVTIS 151
Score = 43.5 bits (101), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 42/74 (56%)
Query: 350 STTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATEGVVMVSGTSDQMRA 409
++T E+ IP + + G + ++ IRQ+SGA + + + G++E + ++GT +
Sbjct: 265 ASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANAMEGSSERQITITGTPANISL 324
Query: 410 AQSLIHAFILCGVT 423
AQ LI+A + VT
Sbjct: 325 AQYLINARLTSEVT 338
>gi|328702409|ref|XP_001943097.2| PREDICTED: heterogeneous nuclear ribonucleoprotein K-like isoform 1
[Acyrthosiphon pisum]
gi|328702413|ref|XP_003241893.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K-like isoform 3
[Acyrthosiphon pisum]
Length = 426
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 78/170 (45%), Gaps = 15/170 (8%)
Query: 48 EEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEM 107
+++ ++L GS+IGKGG + + + A++ + D P E + +IS+ +N+
Sbjct: 21 DDIELRVLIPSKVAGSIIGKGGFNISRLRTDYNATVTVPD-CPGPERILTIISSNDNALK 79
Query: 108 RHSPAQDAVMRVHSRIAEIGFEPGQA----------VVARLLVHSQQIGCLLGRGGHIVS 157
+ SR G GQ V R+LVH Q GC++G+GG V
Sbjct: 80 VLGEVMGNLEDGGSRFKRGGAGGGQGNNDNQGGETDVDVRMLVHQSQAGCIIGKGGLKVK 139
Query: 158 EMRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLR 207
E+R TG+ I+++ C D +VQ+ G ++ D + + L+
Sbjct: 140 ELREKTGSRIKIY----TSCCPMSTDRVVQITGKPNTCSDCVREVLDLLK 185
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 43/78 (55%), Gaps = 2/78 (2%)
Query: 341 SGNHAAILTSTTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATEGVVMV 400
+G AA ST +V IP+ + G+ + + IRQ SGA + + +P G+ E ++ +
Sbjct: 337 AGKPAAFNGST--QVTIPKDLAGAIIGKAGARIRRIRQDSGAGITIGEPTEGSDERIITI 394
Query: 401 SGTSDQMRAAQSLIHAFI 418
+GT Q++ AQ L+ +
Sbjct: 395 NGTDSQIQMAQYLLQQCV 412
>gi|226529800|ref|NP_001141507.1| uncharacterized protein LOC100273619 [Zea mays]
gi|194704864|gb|ACF86516.1| unknown [Zea mays]
gi|223950149|gb|ACN29158.1| unknown [Zea mays]
gi|413941634|gb|AFW74283.1| hypothetical protein ZEAMMB73_757154 [Zea mays]
Length = 702
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 80/179 (44%), Gaps = 23/179 (12%)
Query: 48 EEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIA-DILPDSEERIVVISARENSE 106
+E+ K+ KVG +IGK G +R Q +GA I+I DI DS + E
Sbjct: 142 QEISRKIEVPNSKVGVVIGKAGETIRNLQISSGAKIQITKDIEADSNALTRPV------E 195
Query: 107 MRHSPA--QDAVMRVHSRIAEIGFEPGQAVVAR-------------LLVHSQQIGCLLGR 151
+ +P A + S IAE A++AR + V ++G ++G+
Sbjct: 196 LVGTPGSVDKAEQLIKSVIAEAEAGGSPALIARGFGSGQPGSEQFEMTVPDNKVGLIIGK 255
Query: 152 GGHIVSEMRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETI 210
GG + M+ +GA I++ P+ P + + IV+V GN ++ A I + +T
Sbjct: 256 GGETIKGMQTKSGARIQLIPQ-HPPEGVTLTERIVRVTGNKKQIEAAKDLIKQAMNQTF 313
>gi|148691147|gb|EDL23094.1| neuro-oncological ventral antigen 2 [Mus musculus]
Length = 411
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 81/186 (43%), Gaps = 37/186 (19%)
Query: 47 EEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIA---DILPDSEERIVVISARE 103
E E K+L GS+IGKGG + Q ETGA+IK++ D P + ER+ ++
Sbjct: 1 EGEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQG-- 58
Query: 104 NSEMRHSPAQDAVMRVHSRIAE---------------------IGFEPGQAVVARLLVHS 142
+A+ VHS IAE P +A A+L+V +
Sbjct: 59 --------TAEALNAVHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVPN 110
Query: 143 QQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHI 202
G ++G+GG V + +GA +++ Q P + + +V V G V A+ I
Sbjct: 111 STAGLIIGKGGATVKAVMEQSGAWVQL---SQKPEGINLQERVVTVSGEPEQVHKAVSAI 167
Query: 203 TSRLRE 208
+++E
Sbjct: 168 VQKVQE 173
>gi|392344006|ref|XP_002728759.2| PREDICTED: RNA-binding protein Nova-2 [Rattus norvegicus]
Length = 576
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 80/176 (45%), Gaps = 17/176 (9%)
Query: 47 EEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIA---DILPDSEERIVVIS-AR 102
E E K+L GS+IGKGG + Q ETGA+IK++ D P + ER+ ++
Sbjct: 114 EGEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTA 173
Query: 103 ENSEMRHSPAQDAVMRVHSRIA----------EIGFEPGQAVVARLLVHSQQIGCLLGRG 152
E HS + V + + + P +A A+L+V + G ++G+G
Sbjct: 174 EALNAAHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVPNSTAGLIIGKG 233
Query: 153 GHIVSEMRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRE 208
G V + +GA +++ Q P + + +V V G V A+ I +++E
Sbjct: 234 GATVKAVMEQSGAWVQL---SQKPEGINLQERVVTVSGEPEQVHKAVSAIVQKVQE 286
Score = 39.3 bits (90), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 47/105 (44%), Gaps = 9/105 (8%)
Query: 313 WTPQGVGGGDPRGFDASSGFTPRNRPVESGNHAAILTSTTIEVVIPQLYMAHVYGENNSN 372
W + + G R + G TP V G ++V+IP + G+
Sbjct: 85 WDQEKLALGCDR--EKGVGVTPEKLGVTHGEEGEYF----LKVLIPSYAAGSIIGKGGQT 138
Query: 373 LSHIRQISGANVVVNDPK---PGATEGVVMVSGTSDQMRAAQSLI 414
+ +++ +GA + ++ K PG TE V +V GT++ + AA S I
Sbjct: 139 IVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEALNAAHSFI 183
>gi|355559801|gb|EHH16529.1| hypothetical protein EGK_11818, partial [Macaca mulatta]
Length = 542
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 87/168 (51%), Gaps = 17/168 (10%)
Query: 46 YEEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADIL-PDSEERIVVISAREN 104
Y E+ V L VG++IGK G+ ++ GASIKIA PD ER+V+I+
Sbjct: 367 YPEQEVVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITGPPE 426
Query: 105 SEMRHSPAQDAVMRVHSRIAEIG-FEPGQAVV--ARLLVHSQQIGCLLGRGGHIVSEMRR 161
++ + A R+ ++ E F P + V A + V S G ++G+GG V+E++
Sbjct: 427 AQFK------AQGRIFGKLKEEKFFTPKEEVKLEAHIRVPSSTAGRVIGKGGKTVNELQN 480
Query: 162 ATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRET 209
T A + + P+DQ P + IV++IG++ + Q A ++RET
Sbjct: 481 LTSAEV-IVPRDQTP--DENEEVIVRIIGHFFASQTA----QRKIRET 521
>gi|402860703|ref|XP_003894762.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2
isoform 3 [Papio anubis]
Length = 536
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 82/157 (52%), Gaps = 13/157 (8%)
Query: 46 YEEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADIL-PDSEERIVVISAREN 104
Y E+ V L VG++IGK G+ ++ GASIKIA PD ER+V+I+
Sbjct: 361 YPEQEVVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITGPPE 420
Query: 105 SEMRHSPAQDAVMRVHSRIAEIG-FEPGQAVV--ARLLVHSQQIGCLLGRGGHIVSEMRR 161
++ + A R+ ++ E F P + V A + V S G ++G+GG V+E++
Sbjct: 421 AQFK------AQGRIFGKLKEENFFNPKEEVKLEAHIRVPSSTAGRVIGKGGKTVNELQN 474
Query: 162 ATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDA 198
T A + + P+DQ P + IV++IG++ + Q A
Sbjct: 475 LTSAEV-IVPRDQTP--DENEEVIVRIIGHFFASQTA 508
>gi|195131533|ref|XP_002010205.1| GI15803 [Drosophila mojavensis]
gi|193908655|gb|EDW07522.1| GI15803 [Drosophila mojavensis]
Length = 596
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 78/159 (49%), Gaps = 14/159 (8%)
Query: 59 DKVGSLIGKGGSIVRTFQNETGASIKIADI-----LPDSEERIVVISARENSEMRHSPAQ 113
+ VG++IG GS +R+ + AS+KIA + L ER V I + +
Sbjct: 303 NAVGAIIGTKGSHIRSIMRFSSASLKIAPLDADKPLDQQTERKVTIVGTPEGQWK----- 357
Query: 114 DAVMRVHSRIAEIGFEPGQA---VVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVF 170
A + ++ E GF G + LLV S Q+G ++G+GG V E++R TG+ I++
Sbjct: 358 -AQYMIFEKMREEGFMCGTDDVRLTVELLVASSQVGRIIGKGGQNVRELQRVTGSVIKLP 416
Query: 171 PKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRET 209
AP G + V +IG ++SVQ A I + + T
Sbjct: 417 EHALAPPSGGDEETPVHIIGPFYSVQSAQRRIRAMMLST 455
>gi|67969673|dbj|BAE01185.1| unnamed protein product [Macaca fascicularis]
Length = 324
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 82/367 (22%), Positives = 141/367 (38%), Gaps = 79/367 (21%)
Query: 57 HLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMRHSPAQDAV 116
H +VGS+IGK G V+ + E+GA I I++ + ERI+ ++ N+ + +
Sbjct: 2 HGKEVGSIIGKKGESVKKMREESGARINISE--GNCPERIITLAGPTNAIFKAFAM--II 57
Query: 117 MRVHSRIAEIGFEPGQA----VVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPK 172
++ I+ A V RL+V + Q G L+G+GG + E+R +TGA ++V
Sbjct: 58 DKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQV-AG 116
Query: 173 DQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKRPGPNNGHSYLPPFPEMP 232
D P + + + + G S+ + + I + ET + + P P P
Sbjct: 117 DMLP---NSTERAITIAGIPQSIIECVKQICVVMLET---LSQSPPKGVTIPYRPKPSSS 170
Query: 233 PPPFRPRHNPASPGSYPSPVGPFHSMDRGMGPSQPFDHQAAFSHGMDPMVPPNSDRIPFP 292
P F G Y P P HQ A PM
Sbjct: 171 PVIFAGGQAYTIQGQYAIP-----------QPDLTKLHQLAMQQSHFPMT---------- 209
Query: 293 YGSERPGHGPTFDRPPSPRSWTPQGVGGGDPRGFDASSGFTPRNRPVESGNHAAILTSTT 352
HG T GF+ + ++ +H + +
Sbjct: 210 -------HGNT---------------------------GFSGLDASAQTTSHELTIPNDL 235
Query: 353 IEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATEGVVMVSGTSDQMRAAQS 412
I +I G + ++ IRQ+SGA + + +P G+T+ V ++G++ + AQ
Sbjct: 236 IGCII---------GRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTITGSAASISLAQY 286
Query: 413 LIHAFIL 419
LI+ L
Sbjct: 287 LINVSCL 293
Score = 45.1 bits (105), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 34/52 (65%), Gaps = 1/52 (1%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIA-DILPDSEERIVVIS 100
V +L+ + GSLIGKGG ++ + TGA +++A D+LP+S ER + I+
Sbjct: 79 VTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIA 130
>gi|410970839|ref|XP_003991884.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2
isoform 3 [Felis catus]
Length = 542
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 82/157 (52%), Gaps = 13/157 (8%)
Query: 46 YEEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADIL-PDSEERIVVISAREN 104
Y E+ + L VG++IGK G+ ++ GASIKIA PD ER+V+I+
Sbjct: 367 YPEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITGPPE 426
Query: 105 SEMRHSPAQDAVMRVHSRIAEIG-FEPGQAVV--ARLLVHSQQIGCLLGRGGHIVSEMRR 161
++ + A R+ ++ E F P + V A + V S G ++G+GG V+E++
Sbjct: 427 AQFK------AQGRIFGKLKEENFFNPKEEVKLEAHIRVPSSTAGRVIGKGGKTVNELQN 480
Query: 162 ATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDA 198
T A + + P+DQ P + IV++IG++ + Q A
Sbjct: 481 LTSAEV-IVPRDQTP--DENEEVIVRIIGHFFASQTA 514
>gi|350591798|ref|XP_003483335.1| PREDICTED: replication factor C (activator 1) 4, 37kDa [Sus scrofa]
Length = 578
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 82/157 (52%), Gaps = 13/157 (8%)
Query: 46 YEEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADIL-PDSEERIVVISAREN 104
Y E+ + L VG++IGK G+ ++ GASIKIA PD ER+V+I+
Sbjct: 403 YPEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITGPPE 462
Query: 105 SEMRHSPAQDAVMRVHSRIAEIG-FEPGQAVV--ARLLVHSQQIGCLLGRGGHIVSEMRR 161
++ + A R+ ++ E F P + V A + V S G ++G+GG V+E++
Sbjct: 463 AQFK------AQGRIFGKLKEENFFNPKEEVKLEAHIRVPSSTAGRVIGKGGKTVNELQN 516
Query: 162 ATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDA 198
T A + + P+DQ P + IV++IG++ + Q A
Sbjct: 517 LTSAEV-IVPRDQTP--DENEEVIVRIIGHFFASQTA 550
>gi|66472276|ref|NP_001018567.1| poly(rC) binding protein 3 [Danio rerio]
gi|63101380|gb|AAH95089.1| Poly(rC) binding protein 3 [Danio rerio]
gi|182890686|gb|AAI65090.1| Pcbp3 protein [Danio rerio]
Length = 241
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 67/132 (50%), Gaps = 24/132 (18%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMRH 109
+ +LL H +VGS+IGK G V+ + E+GA I I++ + ERIV I+
Sbjct: 16 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE--GNCPERIVTITG-------- 65
Query: 110 SPAQDAVMRVHSRIA---------EIGFEPGQA---VVARLLVHSQQIGCLLGRGGHIVS 157
DA+ + + IA + P + V RL+V + Q G L+G+GG +
Sbjct: 66 --PTDAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIK 123
Query: 158 EMRRATGASIRV 169
EMR +TGA ++V
Sbjct: 124 EMRESTGAQVQV 135
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 35/52 (67%), Gaps = 1/52 (1%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIA-DILPDSEERIVVIS 100
V +L+ + GSLIGKGGS ++ + TGA +++A D+LP+S ER V IS
Sbjct: 100 VTLRLVVPASQCGSLIGKGGSKIKEMRESTGAQVQVAGDMLPNSTERAVTIS 151
>gi|402860705|ref|XP_003894763.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2
isoform 4 [Papio anubis]
Length = 542
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 82/157 (52%), Gaps = 13/157 (8%)
Query: 46 YEEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADIL-PDSEERIVVISAREN 104
Y E+ V L VG++IGK G+ ++ GASIKIA PD ER+V+I+
Sbjct: 367 YPEQEVVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITGPPE 426
Query: 105 SEMRHSPAQDAVMRVHSRIAEIG-FEPGQAVV--ARLLVHSQQIGCLLGRGGHIVSEMRR 161
++ + A R+ ++ E F P + V A + V S G ++G+GG V+E++
Sbjct: 427 AQFK------AQGRIFGKLKEENFFNPKEEVKLEAHIRVPSSTAGRVIGKGGKTVNELQN 480
Query: 162 ATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDA 198
T A + + P+DQ P + IV++IG++ + Q A
Sbjct: 481 LTSAEV-IVPRDQTP--DENEEVIVRIIGHFFASQTA 514
>gi|351709601|gb|EHB12520.1| Insulin-like growth factor 2 mRNA-binding protein 2 [Heterocephalus
glaber]
Length = 493
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 82/157 (52%), Gaps = 13/157 (8%)
Query: 46 YEEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADIL-PDSEERIVVISAREN 104
Y E+ + L VG++IGK G+ ++ GASIKIA PD ER+V+I+
Sbjct: 318 YPEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITGPPE 377
Query: 105 SEMRHSPAQDAVMRVHSRIAEIG-FEPGQAVV--ARLLVHSQQIGCLLGRGGHIVSEMRR 161
++ + A R+ ++ E F P + V A + V S G ++G+GG V+E++
Sbjct: 378 AQFK------AQGRIFGKLKEENFFNPKEEVKLEAHIRVPSSTAGRVIGKGGKTVNELQN 431
Query: 162 ATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDA 198
T A + + P+DQ P + IV++IG++ + Q A
Sbjct: 432 LTSAEV-IVPRDQTP--DENEEVIVRIIGHFFASQTA 465
>gi|449473856|ref|XP_004186185.1| PREDICTED: LOW QUALITY PROTEIN: poly(rC) binding protein 4
[Taeniopygia guttata]
Length = 245
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 68/122 (55%), Gaps = 15/122 (12%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIA-DILPDSEERIVVISARENSEMR 108
V +L+ + GSLIGK G+ +R + TGA +++A D+LP+S ER V +S
Sbjct: 106 VTLRLVIPASQCGSLIGKAGAKIREIRESTGAQVQVAGDLLPNSTERAVTVSG------- 158
Query: 109 HSPAQDAVMRVHSRIAEIGFEPG-QAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASI 167
D +++ + +I +P Q+ LV + IGC++GR G +SE+R+ +GA I
Sbjct: 159 ---VPDTIIQC---VRQICLDPSSQSSSQEFLVPNDLIGCIIGRHGSKISEIRQMSGAHI 212
Query: 168 RV 169
++
Sbjct: 213 KI 214
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 65/131 (49%), Gaps = 23/131 (17%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMRH 109
+ ++L H ++GS+IGK G V+ + ++ A I I++ ERI I+
Sbjct: 23 LTLRMLMHGKEIGSIIGKKGETVKRIREQSTARITISE--GSCPERITTITG-------- 72
Query: 110 SPAQDAVMRVHSRIA----------EIGFEPGQA-VVARLLVHSQQIGCLLGRGGHIVSE 158
+ DAV R S IA G G+A V RL++ + Q G L+G+ G + E
Sbjct: 73 --STDAVFRAVSMIAFKLEEDLGAGGDGVSAGRAPVTLRLVIPASQCGSLIGKAGAKIRE 130
Query: 159 MRRATGASIRV 169
+R +TGA ++V
Sbjct: 131 IRESTGAQVQV 141
Score = 42.4 bits (98), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 41/68 (60%)
Query: 350 STTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATEGVVMVSGTSDQMRA 409
S++ E ++P + + G + S +S IRQ+SGA++ + + G++E V ++GT +
Sbjct: 178 SSSQEFLVPNDLIGCIIGRHGSKISEIRQMSGAHIKIGNQTEGSSERHVTITGTPVSITL 237
Query: 410 AQSLIHAF 417
AQ LI A+
Sbjct: 238 AQYLITAW 245
>gi|115471839|ref|NP_001059518.1| Os07g0439100 [Oryza sativa Japonica Group]
gi|38175703|dbj|BAC84296.2| unknown protein [Oryza sativa Japonica Group]
gi|50508539|dbj|BAD30838.1| unknown protein [Oryza sativa Japonica Group]
gi|113611054|dbj|BAF21432.1| Os07g0439100 [Oryza sativa Japonica Group]
Length = 233
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 57/262 (21%), Positives = 106/262 (40%), Gaps = 35/262 (13%)
Query: 159 MRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKRPGP 218
M T +++ + P C S ++ ++Q+ G +V+DAL + +LR F ++
Sbjct: 1 MNNTTRTKMKILEETAVPACASQYELVLQITGEPMNVRDALSLVCEKLRNHCFSSEKTTY 60
Query: 219 NNGHSYLPPFPEMPPPPFRPRHNPASPGSYPSPVGPFHSMDRGMGPSQPFDHQAAFSHGM 278
NGH E+ +S S + D G S P + G
Sbjct: 61 GNGHVPSSAIDELTT---------SSQNEIDSVQNSISAFDLGCLGS-PQIQKPTIGCGT 110
Query: 279 DPMVPPNSDRIPFPYGSERPGHGPTFDRPPSPRSWTPQGVGGGDPRGFDASS--GFTPRN 336
+ P N E+P +G + G + G D S+ +
Sbjct: 111 EINNPINE--------VEKPANG-------NGTGINNLNTGMQNENGIDVSNHGATSLEE 155
Query: 337 RPVESGNHAAILTSTTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATEG 396
+ + G A +T T EV V G+N ++ + IR++SGA+V + P P ++G
Sbjct: 156 KKLLRGIKTATITRITYEVA--------VCGDNGNDFTMIREMSGADVTAHYPLPETSDG 207
Query: 397 VVMVSGTSDQMRAAQSLIHAFI 418
++++SGT D+ ++A ++ +
Sbjct: 208 MIVISGTPDEAQSALAMFLDLV 229
>gi|354475601|ref|XP_003500016.1| PREDICTED: poly(rC)-binding protein 2-like [Cricetulus griseus]
Length = 325
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 83/372 (22%), Positives = 146/372 (39%), Gaps = 90/372 (24%)
Query: 53 KLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMRHSPA 112
+LL H +VGS+I K G V+ + E+GA I+D + ERI+ ++ N+ +
Sbjct: 17 RLLMHGKEVGSIIAKKGESVKKMREESGARTSISD--GNCPERIITLAGPTNAIFK---- 70
Query: 113 QDAVMRVHSRIAEIGFEPGQA---------VVARLLVHSQQIGCLLGRGGHIVSEMRRAT 163
A + ++ E G V RL+V + Q G L+G+GG + E+R +T
Sbjct: 71 --AFAMIIDKLEE-GISSSMTNSTAASRPPVALRLVVPASQCGSLIGKGGCKIKEIREST 127
Query: 164 GASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKRPGPNNGHS 223
GA ++V D P + + + + G S+ + + I + ET + +P P+
Sbjct: 128 GAQVQV-AGDMLP---NSTEWAITIAGIPQSLIECVKQICVVMLET---LSQP-PH---- 175
Query: 224 YLPPFPEMPPPPFRPRHNPASPGSYPSPVGPFHSMDRGMGPSQPFDHQAAFSHGMDPMVP 283
P P+ +RP+ P F+ G D
Sbjct: 176 ---PHPKGLTITYRPK---------------------------PSSSLVIFAGGQD-RYS 204
Query: 284 PNSDRIPFPYGSERPGHGPTFDRPPSPRSWTPQGV-----------GGGDPRGFDASSGF 332
SD FP+ ++ P + PP + Q G G DAS+
Sbjct: 205 TGSDSASFPHTTQSMCLNPDLEGPPLELTKLHQLALQQSHFPMTHGNTGFSAGLDASA-- 262
Query: 333 TPRNRPVESGNHAAILTSTTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPG 392
+T+ E+ I + + G + ++ IRQ+SGA + +P G
Sbjct: 263 ----------------QTTSHELTISNDLIGCIIGRQGAKINEIRQMSGAQIKTANPVEG 306
Query: 393 ATEGVVMVSGTS 404
+T+ V ++G++
Sbjct: 307 STDRQVTITGSA 318
Score = 42.4 bits (98), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 33/52 (63%), Gaps = 1/52 (1%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIA-DILPDSEERIVVIS 100
V +L+ + GSLIGKGG ++ + TGA +++A D+LP+S E + I+
Sbjct: 98 VALRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTEWAITIA 149
>gi|449509689|ref|XP_002192903.2| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2
[Taeniopygia guttata]
Length = 531
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 89/172 (51%), Gaps = 17/172 (9%)
Query: 48 EEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADIL-PDSEERIVVISARENSE 106
E+ V L VG++IGK G ++ GASIKIA PD+ ER+V+I+ ++
Sbjct: 357 EQEVVNLFIPTQAVGAIIGKKGQHIKQLARFAGASIKIAPAEGPDASERMVIITGPPEAQ 416
Query: 107 MRHSPAQDAVMRVHSRIAEIG-FEPGQAVV--ARLLVHSQQIGCLLGRGGHIVSEMRRAT 163
+ A R+ ++ E F P + V A + V S G ++G+GG V+E++ T
Sbjct: 417 FK------AQGRIFGKLKEENFFNPKEEVKLEAHIKVPSFAAGRVIGKGGKTVNELQNLT 470
Query: 164 GASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKR 215
A + + P+DQ P + +V++IG++ + Q A ++RE + +K+
Sbjct: 471 SAEV-IVPRDQTP--DENEEVVVKIIGHFFASQTA----QRKIREIVQQVKQ 515
Score = 38.1 bits (87), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 35/159 (22%), Positives = 74/159 (46%), Gaps = 9/159 (5%)
Query: 52 FKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKI--ADILPDSEERIVVISARENSEMRH 109
++L VG++IGK G ++ +T + + I + +E+ I + + E
Sbjct: 119 LRMLVPTQFVGAIIGKEGLTIKNLTKQTQSKVDIHRKENAGAAEKPITIHATPEGC---- 174
Query: 110 SPAQDAVMRVHSRIAEIGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRV 169
S A ++ + + A+ + + V ++L H+ +G L+G+ G + ++ + TG I +
Sbjct: 175 SEACRMILDIMQKEAD-ETKSAEEVPLKILAHNSLVGRLIGKEGRNLKKIEQDTGTKITI 233
Query: 170 FPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRE 208
P Q +P + + V G+ + +A I +LRE
Sbjct: 234 SPL-QDLTIYNP-ERTITVKGSTEACSNAEVEIMKKLRE 270
>gi|344282127|ref|XP_003412826.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2-like
[Loxodonta africana]
Length = 599
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 82/157 (52%), Gaps = 13/157 (8%)
Query: 46 YEEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADIL-PDSEERIVVISAREN 104
Y E+ + L VG++IGK G+ ++ GASIKIA PD ER+V+I+
Sbjct: 424 YPEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITGPPE 483
Query: 105 SEMRHSPAQDAVMRVHSRIAEIG-FEPGQAVV--ARLLVHSQQIGCLLGRGGHIVSEMRR 161
++ + A R+ ++ E F P + V A + V S G ++G+GG V+E++
Sbjct: 484 AQFK------AQGRIFGKLKEENFFNPKEEVKLEAHIRVPSSTAGRVIGKGGKTVNELQN 537
Query: 162 ATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDA 198
T A + + P+DQ P + IV++IG++ + Q A
Sbjct: 538 LTSAEV-IVPRDQTP--DENEEVIVRIIGHFFASQTA 571
>gi|405957027|gb|EKC23265.1| Heterogeneous nuclear ribonucleoprotein K [Crassostrea gigas]
Length = 594
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 85/194 (43%), Gaps = 32/194 (16%)
Query: 49 EVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMR 108
+V + L G++IGKGGS ++ + + AS+ + D S ER++ I A +
Sbjct: 77 KVELRFLLASKNAGAIIGKGGSNIKRLRQDYKASVTVPD--STSPERVLTIGANLGT--- 131
Query: 109 HSPAQDAVMRVHSRIAEIGFEPGQAVVA--RLLVHSQQIGCLLGRGGHIVSEMRRATGAS 166
A + V+ + ++ + RLLVH Q GC++GR G + E+R TGA
Sbjct: 132 ---ALECVLDIIPKLEDYKNYKNNDFDCEMRLLVHQSQAGCIIGRAGFKIKELRERTGAQ 188
Query: 167 IRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKRPGPNNGHSYLP 226
I+V+ + C + +V + G V D + ETI + + P
Sbjct: 189 IKVYSQ----CCPESTERVVAIGGKPKIVVDCI--------ETIHDLLQTAP-------- 228
Query: 227 PFPEMPPPPFRPRH 240
P+ P P+ P +
Sbjct: 229 --PKGPNQPYDPLY 240
Score = 44.3 bits (103), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 17/65 (26%), Positives = 41/65 (63%)
Query: 352 TIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATEGVVMVSGTSDQMRAAQ 411
+ +V IP+ + G+ + + IR+ S A +V+++ PG+ + ++ ++GT +Q+++AQ
Sbjct: 472 STQVTIPKDLAGAIIGKGGARIQEIRRQSNAQIVIDEGLPGSNDRIITITGTHEQIQSAQ 531
Query: 412 SLIHA 416
L+ +
Sbjct: 532 FLLQS 536
Score = 38.5 bits (88), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 49/106 (46%), Gaps = 9/106 (8%)
Query: 20 YAPGYHSRG-YSSGPGHETVGGRNRMFYEEEVV--FKLLCHLDKVGSLIGKGGSIVRTFQ 76
Y GY + G + GG +MF E + ++ D G++IGKGG+ ++ +
Sbjct: 438 YDDGYDNFGGMGQNFSQDNSGGMGQMFGNEGNLPSTQVTIPKDLAGAIIGKGGARIQEIR 497
Query: 77 NETGASIKIADILPDSEERIVVISARENSEMRHSPAQDAVMRVHSR 122
++ A I I + LP S +RI+ I+ H Q A + SR
Sbjct: 498 RQSNAQIVIDEGLPGSNDRIITITG------THEQIQSAQFLLQSR 537
>gi|145207996|ref|NP_898850.2| insulin-like growth factor 2 mRNA-binding protein 2 [Mus musculus]
gi|81889459|sp|Q5SF07.1|IF2B2_MOUSE RecName: Full=Insulin-like growth factor 2 mRNA-binding protein 2;
Short=IGF2 mRNA-binding protein 2; Short=IMP-2; AltName:
Full=IGF-II mRNA-binding protein 2; AltName: Full=VICKZ
family member 2
gi|46577878|gb|AAT01428.1| insulin-like growth factor 2 mRNA-binding protein 2 [Mus musculus]
Length = 592
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 89/174 (51%), Gaps = 17/174 (9%)
Query: 46 YEEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADIL-PDSEERIVVISAREN 104
Y E+ L VG++IGK G+ ++ GASIKIA PD ER+V+I+
Sbjct: 417 YPEQETVSLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITGPPE 476
Query: 105 SEMRHSPAQDAVMRVHSRIAEIG-FEPGQAVV--ARLLVHSQQIGCLLGRGGHIVSEMRR 161
++ + A R+ ++ E F P + V A + V S G ++G+GG V+E++
Sbjct: 477 AQFK------AQGRIFGKLKEENFFNPKEEVKLEAHIRVPSSTAGRVIGKGGKTVNELQN 530
Query: 162 ATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKR 215
T A + + P+DQ P + IV++IG++ + Q A ++RE + +K+
Sbjct: 531 LTSAEV-IVPRDQTP--DENEEVIVRIIGHFFASQTA----QRKIREIVQQVKQ 577
>gi|47226335|emb|CAG09303.1| unnamed protein product [Tetraodon nigroviridis]
Length = 760
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 82/155 (52%), Gaps = 16/155 (10%)
Query: 47 EEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADI-LPDSEERIVVISARENS 105
E+EV + L VG+LIGK G ++ + GASIKIA PD+ ER+V+I+ +
Sbjct: 494 EQEVAY-LFIPTQAVGALIGKKGQHIKQLAHFAGASIKIAPAEKPDATERMVIITGTPEA 552
Query: 106 EMRHSPAQDAVMRVHSRIAEIGFEPGQAVVARLLVH----SQQIGCLLGRGGHIVSEMRR 161
+ + A R+ ++ E G+ V RL H S G ++G+GG V+E++
Sbjct: 553 QFK------AQGRIFGKLKEENIFTGKEEV-RLETHIRVPSTAAGRVIGKGGKTVNELQS 605
Query: 162 ATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQ 196
T A + + P+DQ P ++ +V++ G++ + Q
Sbjct: 606 LTSAEV-IVPRDQTP--DEKNEVVVKICGHFFASQ 637
>gi|242019024|ref|XP_002429966.1| polyrC binding protein, putative [Pediculus humanus corporis]
gi|212515021|gb|EEB17228.1| polyrC binding protein, putative [Pediculus humanus corporis]
Length = 319
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 50/226 (22%), Positives = 98/226 (43%), Gaps = 31/226 (13%)
Query: 52 FKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIA---DILPDSEERIVVISARENSEMR 108
K+L G++IGKGG + Q +TGA +K++ D P + ER+ +++ + M
Sbjct: 70 LKILVPCIAAGAIIGKGGETIAQLQKDTGARMKMSKANDFYPCTTERVCLVTGSVEAIMA 129
Query: 109 -HSPAQDAVMR--------VHSRIAEIGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSEM 159
S D + +++ E ++ ++L+ + G ++G+GG+ + +M
Sbjct: 130 VMSFIMDKIKEKPDLTSKAINTSDTESKLSADRSKQVKILIPNSTAGMIIGKGGNYIKQM 189
Query: 160 RRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKRPGPN 219
+ +G+ I++ K + V +IG + + A+ + +++ E P
Sbjct: 190 KEESGSYIQLSQKSNDASL-QLQERCVTIIGEMENNKKAILKLLAKVVE--------DPQ 240
Query: 220 NGHSYLPPFPEMPPPPFR------PRHNPASPG----SYPSPVGPF 255
+G + ++P P P NPASPG S S V P
Sbjct: 241 SGSCLNVSYADIPGPVANFNPTGSPYANPASPGYSTASLSSAVAPM 286
>gi|301786262|ref|XP_002928556.1| PREDICTED: RNA-binding protein Nova-2-like [Ailuropoda melanoleuca]
Length = 329
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 83/192 (43%), Gaps = 37/192 (19%)
Query: 41 RNRMFYEEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIA---DILPDSEERIV 97
R+ E E K+L GS+IGKGG + Q ETGA+IK++ D P + ER+
Sbjct: 24 RSNTGEEGEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVC 83
Query: 98 VISARENSEMRHSPAQDAVMRVHSRIAE---------------------IGFEPGQAVVA 136
++ +A+ VHS IAE P +A A
Sbjct: 84 LVQG----------TAEALNAVHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQA 133
Query: 137 RLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQ 196
+L+V + G ++G+GG V + +GA +++ Q P + + +V V G V
Sbjct: 134 KLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQL---SQKPEGINLQERVVTVSGEPEQVH 190
Query: 197 DALFHITSRLRE 208
A+ I +++E
Sbjct: 191 KAVSAIVQKVQE 202
Score = 38.9 bits (89), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 38/185 (20%), Positives = 80/185 (43%), Gaps = 35/185 (18%)
Query: 53 KLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDS---EERIVVISARENS---- 105
KL+ G +IGKGG+ V+ ++GA ++++ P+ +ER+V +S
Sbjct: 134 KLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQ-KPEGINLQERVVTVSGEPEQVHKA 192
Query: 106 ------EMRHSPAQDAVMRV------------------HSRIAEIGFEPGQAVVARLLVH 141
+++ P + + + ++ A++ E + +V + V
Sbjct: 193 VSAIVQKVQEDPQSSSCLNISYANVAGPVANSNPTGSPYASPADLAAESAKELV-EIAVP 251
Query: 142 SQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFH 201
+G +LG+GG + E + TGA I++ K + + V + G+ + Q A +
Sbjct: 252 ENLVGAILGKGGKTLVEYQELTGARIQISKKGEF--LPGTRNRRVTITGSPAATQAAQYL 309
Query: 202 ITSRL 206
I+ R+
Sbjct: 310 ISQRV 314
>gi|397470077|ref|XP_003806660.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2
isoform 1 [Pan paniscus]
gi|179479906|gb|ACB86626.1| insulin-like 2 growth factor 2-binding protein 2 [Homo sapiens]
Length = 536
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 82/157 (52%), Gaps = 13/157 (8%)
Query: 46 YEEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADIL-PDSEERIVVISAREN 104
Y E+ + L VG++IGK G+ ++ GASIKIA PD ER+V+I+
Sbjct: 361 YPEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITGPPE 420
Query: 105 SEMRHSPAQDAVMRVHSRIAEIG-FEPGQAVV--ARLLVHSQQIGCLLGRGGHIVSEMRR 161
++ + A R+ ++ E F P + V A + V S G ++G+GG V+E++
Sbjct: 421 AQFK------AQGRIFGKLKEENFFNPKEEVKLEAHIRVPSSTAGRVIGKGGKTVNELQN 474
Query: 162 ATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDA 198
T A + + P+DQ P + IV++IG++ + Q A
Sbjct: 475 LTSAEV-IVPRDQTP--DENEEVIVRIIGHFFASQTA 508
>gi|390478281|ref|XP_002761548.2| PREDICTED: poly(rC)-binding protein 3 [Callithrix jacchus]
Length = 393
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 67/123 (54%), Gaps = 6/123 (4%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMRH 109
+ +LL H +VGS+IGK G V+ + E+GA I I++ + ERIV I+ ++ +
Sbjct: 46 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE--GNCPERIVTITGPTDAIFK- 102
Query: 110 SPAQDAVMRVHSRIAEIGFEPGQA---VVARLLVHSQQIGCLLGRGGHIVSEMRRATGAS 166
+ A A I + P + V RL+V + Q G L+G+GG + E+R +TGA
Sbjct: 103 AFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQ 162
Query: 167 IRV 169
++V
Sbjct: 163 VQV 165
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 44/81 (54%), Gaps = 11/81 (13%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIA-DILPDSEERIVVISARENSEMR 108
V +L+ + GSLIGKGGS ++ + TGA +++A D+LP+S ER V IS
Sbjct: 130 VTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNSTERAVTISG------- 182
Query: 109 HSPAQDAVMRVHSRIAEIGFE 129
DA+++ +I + E
Sbjct: 183 ---TPDAIIQCVKQICVVMLE 200
Score = 44.7 bits (104), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 42/74 (56%)
Query: 350 STTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATEGVVMVSGTSDQMRA 409
++T E+ IP + + G + ++ IRQ+SGA + + + G++E + ++GT +
Sbjct: 315 ASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQITITGTPANISL 374
Query: 410 AQSLIHAFILCGVT 423
AQ LI+A + VT
Sbjct: 375 AQYLINARLTSEVT 388
>gi|146336943|gb|ABQ23585.1| putative KH-domain containing protein [Medicago truncatula]
Length = 334
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 89/190 (46%), Gaps = 24/190 (12%)
Query: 47 EEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIA---DILPDSEERIVVISARE 103
E+ + L GS+IGKGGS + FQ+++GA I+++ + P + +RI+++S
Sbjct: 33 EKPTYVRFLVSNSAAGSVIGKGGSTITDFQSQSGARIQLSRNNEFFPGTTDRIIMVSGAI 92
Query: 104 NSEMRHSPAQDAVMRVHSR-IAEIGFEPGQAV----VARLLVHSQQIGCLLGRGGHIVSE 158
N +R AV + S+ ++E+ E V RL+V + G ++G+GG +
Sbjct: 93 NEVLR------AVELILSKLLSELHSEDDNDVEPKTKVRLIVPNGSCGGIIGKGGATIRS 146
Query: 159 MRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKRPGP 218
+ A I++ P+D + +D IV V G + I S+L E P
Sbjct: 147 FIEESQAGIKISPQDNSYY--GQNDRIVTVTGTLDEQMRGIDLIVSKLAED--------P 196
Query: 219 NNGHSYLPPF 228
+ HS PF
Sbjct: 197 HYSHSMSSPF 206
>gi|348582424|ref|XP_003476976.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2-like
[Cavia porcellus]
Length = 532
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 57/189 (30%), Positives = 93/189 (49%), Gaps = 16/189 (8%)
Query: 14 PFHQRGYAPGYHSRGYSSGPGHETVGGRNRMFYEEEVVFKLLCHLDKVGSLIGKGGSIVR 73
P+H GY S Y P H+ + Y E+ + L VG++IGK G+ ++
Sbjct: 328 PYHPFATHSGYFSSLY---PHHQFGPFPHHHSYPEQEIVNLFIPTQAVGAIIGKKGAHIK 384
Query: 74 TFQNETGASIKIADIL-PDSEERIVVISARENSEMRHSPAQDAVMRVHSRIAEIG-FEPG 131
GASIKIA PD ER+V+I+ ++ + A R+ ++ E F P
Sbjct: 385 QLARFAGASIKIAPAEGPDVSERMVIITGPPEAQFK------AQGRIFGKLKEENFFNPK 438
Query: 132 QAVV--ARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAPRCGSPHDEIVQVI 189
+ V A + V S G ++G+GG V+E++ T A + + P+DQ P + IV++I
Sbjct: 439 EEVKLEAHIRVPSSTAGRVIGKGGKTVNELQNLTSAEV-IVPRDQTP--DENEEVIVRII 495
Query: 190 GNYHSVQDA 198
G++ + Q A
Sbjct: 496 GHFFASQTA 504
>gi|281348784|gb|EFB24368.1| hypothetical protein PANDA_018514 [Ailuropoda melanoleuca]
Length = 346
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 83/192 (43%), Gaps = 37/192 (19%)
Query: 41 RNRMFYEEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIA---DILPDSEERIV 97
R+ E E K+L GS+IGKGG + Q ETGA+IK++ D P + ER+
Sbjct: 24 RSNTGEEGEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVC 83
Query: 98 VISARENSEMRHSPAQDAVMRVHSRIAE---------------------IGFEPGQAVVA 136
++ +A+ VHS IAE P +A A
Sbjct: 84 LVQG----------TAEALNAVHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQA 133
Query: 137 RLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQ 196
+L+V + G ++G+GG V + +GA +++ Q P + + +V V G V
Sbjct: 134 KLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQL---SQKPEGINLQERVVTVSGEPEQVH 190
Query: 197 DALFHITSRLRE 208
A+ I +++E
Sbjct: 191 KAVSAIVQKVQE 202
>gi|148665204|gb|EDK97620.1| insulin-like growth factor 2 mRNA binding protein 2, isoform CRA_a
[Mus musculus]
Length = 596
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 89/174 (51%), Gaps = 17/174 (9%)
Query: 46 YEEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADIL-PDSEERIVVISAREN 104
Y E+ L VG++IGK G+ ++ GASIKIA PD ER+V+I+
Sbjct: 421 YPEQETVSLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITGPPE 480
Query: 105 SEMRHSPAQDAVMRVHSRIAEIG-FEPGQAVV--ARLLVHSQQIGCLLGRGGHIVSEMRR 161
++ + A R+ ++ E F P + V A + V S G ++G+GG V+E++
Sbjct: 481 AQFK------AQGRIFGKLKEENFFNPKEEVKLEAHIRVPSSTAGRVIGKGGKTVNELQN 534
Query: 162 ATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKR 215
T A + + P+DQ P + IV++IG++ + Q A ++RE + +K+
Sbjct: 535 LTSAEV-IVPRDQTP--DENEEVIVRIIGHFFASQTA----QRKIREIVQQVKQ 581
>gi|148665206|gb|EDK97622.1| insulin-like growth factor 2 mRNA binding protein 2, isoform CRA_c
[Mus musculus]
Length = 543
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 89/174 (51%), Gaps = 17/174 (9%)
Query: 46 YEEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADIL-PDSEERIVVISAREN 104
Y E+ L VG++IGK G+ ++ GASIKIA PD ER+V+I+
Sbjct: 368 YPEQETVSLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITGPPE 427
Query: 105 SEMRHSPAQDAVMRVHSRIAEIG-FEPGQAVV--ARLLVHSQQIGCLLGRGGHIVSEMRR 161
++ + A R+ ++ E F P + V A + V S G ++G+GG V+E++
Sbjct: 428 AQFK------AQGRIFGKLKEENFFNPKEEVKLEAHIRVPSSTAGRVIGKGGKTVNELQN 481
Query: 162 ATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKR 215
T A + + P+DQ P + IV++IG++ + Q A ++RE + +K+
Sbjct: 482 LTSAEV-IVPRDQTP--DENEEVIVRIIGHFFASQTA----QRKIREIVQQVKQ 528
>gi|145336377|ref|NP_174629.3| far upstream element-binding protein [Arabidopsis thaliana]
gi|110739541|dbj|BAF01679.1| putative single-strand nucleic acid-binding protein [Arabidopsis
thaliana]
gi|110739658|dbj|BAF01737.1| putative single-strand nucleic acid-binding protein [Arabidopsis
thaliana]
gi|110739944|dbj|BAF01877.1| putative single-strand nucleic acid-binding protein [Arabidopsis
thaliana]
gi|332193492|gb|AEE31613.1| far upstream element-binding protein [Arabidopsis thaliana]
Length = 763
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 92/192 (47%), Gaps = 35/192 (18%)
Query: 60 KVGSLIGKGGSIVRTFQNETGASIKI---ADILPDSEER----IVVISARENSEMRHSPA 112
KVG+LIGKGG +VR Q +GA I+I A+ P S R I +S E +E
Sbjct: 242 KVGTLIGKGGEMVRYLQVNSGAKIQIRRDAEADPSSALRPVEIIGTVSCIEKAE------ 295
Query: 113 QDAVMRVHSRIAEIGFEPGQAVVAR-------LLVHSQQIGCLLGRGGHIVSEMRRATGA 165
+++ IAE+ A+ AR + V S ++G ++GRGG + M+ + A
Sbjct: 296 ----KLINAVIAEVEAGGVPALAARGVPEQMEIKVPSDKVGVIIGRGGETIKNMQTKSRA 351
Query: 166 SIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKRPGPNNG---- 221
I++ P+++ + V++ G+ + A T+ +++ ++ RP P +G
Sbjct: 352 RIQLIPQNEGDAS---KERTVRISGDKRQIDIA----TALIKDVMYQDGRPSPYSGGFNQ 404
Query: 222 HSYLPPFPEMPP 233
+Y P P PP
Sbjct: 405 QAYQPRGPGGPP 416
>gi|134026176|gb|AAI35317.1| LOC733863 protein [Xenopus (Silurana) tropicalis]
Length = 475
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 44/133 (33%), Positives = 66/133 (49%), Gaps = 26/133 (19%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMRH 109
+ +LL H +VGS+IGK G V+ + E+GA I I++ ERIV I+
Sbjct: 17 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE--GSCPERIVTITG-------- 66
Query: 110 SPAQDAVMRVHSRIAEIGFEPGQA-------------VVARLLVHSQQIGCLLGRGGHIV 156
DA+ + S IA + FE V RL+V + Q G L+G+GG +
Sbjct: 67 --PTDAIFKAFSMIA-LKFEEDINASMTNSTVTSKPPVTLRLVVPASQCGSLIGKGGSKI 123
Query: 157 SEMRRATGASIRV 169
E+R +TGA ++V
Sbjct: 124 KEIRESTGAQVQV 136
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 44/81 (54%), Gaps = 11/81 (13%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIA-DILPDSEERIVVISARENSEMR 108
V +L+ + GSLIGKGGS ++ + TGA +++A D+LP+S ER V IS
Sbjct: 101 VTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNSTERAVTISGTP----- 155
Query: 109 HSPAQDAVMRVHSRIAEIGFE 129
DA+++ +I + E
Sbjct: 156 -----DAIIQCVKQICVVMLE 171
Score = 38.9 bits (89), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 34/63 (53%)
Query: 354 EVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATEGVVMVSGTSDQMRAAQSL 413
E+ IP + + G S ++ IRQ+SGA + + + G E V ++G+ + AQ L
Sbjct: 294 ELTIPNDLIGCIIGRQGSKINEIRQMSGAQIKIANASEGNGERQVTITGSPANISLAQYL 353
Query: 414 IHA 416
I+A
Sbjct: 354 INA 356
>gi|332215029|ref|XP_003256639.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2
isoform 2 [Nomascus leucogenys]
Length = 536
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 82/157 (52%), Gaps = 13/157 (8%)
Query: 46 YEEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADIL-PDSEERIVVISAREN 104
Y E+ + L VG++IGK G+ ++ GASIKIA PD ER+V+I+
Sbjct: 361 YPEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITGPPE 420
Query: 105 SEMRHSPAQDAVMRVHSRIAEIG-FEPGQAVV--ARLLVHSQQIGCLLGRGGHIVSEMRR 161
++ + A R+ ++ E F P + V A + V S G ++G+GG V+E++
Sbjct: 421 AQFK------AQGRIFGKLKEENFFNPKEEVKLEAHIRVPSSTAGRVIGKGGKTVNELQN 474
Query: 162 ATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDA 198
T A + + P+DQ P + IV++IG++ + Q A
Sbjct: 475 LTSAEV-IVPRDQTP--DENEEVIVRIIGHFFASQTA 508
>gi|194306631|ref|NP_065389.2| poly(rC)-binding protein 3 isoform 1 [Homo sapiens]
gi|296439262|sp|P57721.2|PCBP3_HUMAN RecName: Full=Poly(rC)-binding protein 3; AltName: Full=Alpha-CP3
gi|119629729|gb|EAX09324.1| poly(rC) binding protein 3, isoform CRA_b [Homo sapiens]
Length = 371
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 67/123 (54%), Gaps = 6/123 (4%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMRH 109
+ +LL H +VGS+IGK G V+ + E+GA I I++ + ERIV I+ ++ +
Sbjct: 46 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE--GNCPERIVTITGPTDAIFK- 102
Query: 110 SPAQDAVMRVHSRIAEIGFEPGQA---VVARLLVHSQQIGCLLGRGGHIVSEMRRATGAS 166
+ A A I + P + V RL+V + Q G L+G+GG + E+R +TGA
Sbjct: 103 AFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQ 162
Query: 167 IRV 169
++V
Sbjct: 163 VQV 165
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 44/81 (54%), Gaps = 11/81 (13%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIA-DILPDSEERIVVISARENSEMR 108
V +L+ + GSLIGKGGS ++ + TGA +++A D+LP+S ER V IS
Sbjct: 130 VTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNSTERAVTISG------- 182
Query: 109 HSPAQDAVMRVHSRIAEIGFE 129
DA+++ +I + E
Sbjct: 183 ---TPDAIIQCVKQICVVMLE 200
Score = 44.7 bits (104), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 42/74 (56%)
Query: 350 STTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATEGVVMVSGTSDQMRA 409
++T E+ IP + + G + ++ IRQ+SGA + + + G++E + ++GT +
Sbjct: 293 ASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQITITGTPANISL 352
Query: 410 AQSLIHAFILCGVT 423
AQ LI+A + VT
Sbjct: 353 AQYLINARLTSEVT 366
>gi|380798665|gb|AFE71208.1| poly(rC)-binding protein 3 isoform 1, partial [Macaca mulatta]
Length = 370
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 67/123 (54%), Gaps = 6/123 (4%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMRH 109
+ +LL H +VGS+IGK G V+ + E+GA I I++ + ERIV I+ ++ +
Sbjct: 45 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE--GNCPERIVTITGPTDAIFK- 101
Query: 110 SPAQDAVMRVHSRIAEIGFEPGQA---VVARLLVHSQQIGCLLGRGGHIVSEMRRATGAS 166
+ A A I + P + V RL+V + Q G L+G+GG + E+R +TGA
Sbjct: 102 AFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQ 161
Query: 167 IRV 169
++V
Sbjct: 162 VQV 164
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 44/81 (54%), Gaps = 11/81 (13%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIA-DILPDSEERIVVISARENSEMR 108
V +L+ + GSLIGKGGS ++ + TGA +++A D+LP+S ER V IS
Sbjct: 129 VTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNSTERAVTISG------- 181
Query: 109 HSPAQDAVMRVHSRIAEIGFE 129
DA+++ +I + E
Sbjct: 182 ---TPDAIIQCVKQICVVMLE 199
Score = 44.7 bits (104), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 42/74 (56%)
Query: 350 STTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATEGVVMVSGTSDQMRA 409
++T E+ IP + + G + ++ IRQ+SGA + + + G++E + ++GT +
Sbjct: 292 ASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQITITGTPANISL 351
Query: 410 AQSLIHAFILCGVT 423
AQ LI+A + VT
Sbjct: 352 AQYLINARLTSEVT 365
>gi|291414465|ref|XP_002723480.1| PREDICTED: poly(rC) binding protein 2-like [Oryctolagus cuniculus]
Length = 319
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 68/123 (55%), Gaps = 6/123 (4%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMRH 109
+ +LL H +VGS+IGK G V+ + E+GA I I++ + ERIV I+ ++ +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE--GNCPERIVTITGPTDAIFK- 70
Query: 110 SPAQDAVMRVHSRIAEIGFEPGQA---VVARLLVHSQQIGCLLGRGGHIVSEMRRATGAS 166
+ A A I+ + P + V RL+V + Q G L+G+GG + E+R +TGA
Sbjct: 71 AFAMIAYKFEEDIISSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQ 130
Query: 167 IRV 169
++V
Sbjct: 131 VQV 133
Score = 43.9 bits (102), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 42/74 (56%)
Query: 350 STTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATEGVVMVSGTSDQMRA 409
++T E+ IP + + G + ++ IRQ+SGA + + + G++E + ++GT +
Sbjct: 241 ASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQITITGTPANISL 300
Query: 410 AQSLIHAFILCGVT 423
AQ LI+A + VT
Sbjct: 301 AQYLINARLTSEVT 314
>gi|426243970|ref|XP_004015811.1| PREDICTED: RNA-binding protein Nova-2 [Ovis aries]
Length = 255
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 81/186 (43%), Gaps = 37/186 (19%)
Query: 47 EEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIA---DILPDSEERIVVISARE 103
E E K+L GS+IGKGG + Q ETGA+IK++ D P + ER+ ++
Sbjct: 11 EGEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQG-- 68
Query: 104 NSEMRHSPAQDAVMRVHSRIAE---------------------IGFEPGQAVVARLLVHS 142
+A+ VHS IAE P +A A+L+V +
Sbjct: 69 --------TAEALNAVHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVPN 120
Query: 143 QQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHI 202
G ++G+GG V + +GA +++ Q P + + +V V G V A+ I
Sbjct: 121 STAGLIIGKGGATVKAVMEQSGAWVQL---SQKPEGINLQERVVTVSGEPEQVHKAVSAI 177
Query: 203 TSRLRE 208
+++E
Sbjct: 178 VQKVQE 183
>gi|332256670|ref|XP_003277439.1| PREDICTED: poly(rC)-binding protein 3 [Nomascus leucogenys]
Length = 393
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 67/123 (54%), Gaps = 6/123 (4%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMRH 109
+ +LL H +VGS+IGK G V+ + E+GA I I++ + ERIV I+ ++ +
Sbjct: 46 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE--GNCPERIVTITGPTDAIFK- 102
Query: 110 SPAQDAVMRVHSRIAEIGFEPGQA---VVARLLVHSQQIGCLLGRGGHIVSEMRRATGAS 166
+ A A I + P + V RL+V + Q G L+G+GG + E+R +TGA
Sbjct: 103 AFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQ 162
Query: 167 IRV 169
++V
Sbjct: 163 VQV 165
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 44/81 (54%), Gaps = 11/81 (13%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIA-DILPDSEERIVVISARENSEMR 108
V +L+ + GSLIGKGGS ++ + TGA +++A D+LP+S ER V IS
Sbjct: 130 VTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNSTERAVTISG------- 182
Query: 109 HSPAQDAVMRVHSRIAEIGFE 129
DA+++ +I + E
Sbjct: 183 ---TPDAIIQCVKQICVVMLE 200
Score = 44.7 bits (104), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 42/74 (56%)
Query: 350 STTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATEGVVMVSGTSDQMRA 409
++T E+ IP + + G + ++ IRQ+SGA + + + G++E + ++GT +
Sbjct: 315 ASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQITITGTPANISL 374
Query: 410 AQSLIHAFILCGVT 423
AQ LI+A + VT
Sbjct: 375 AQYLINARLTSEVT 388
>gi|255580721|ref|XP_002531182.1| conserved hypothetical protein [Ricinus communis]
gi|223529223|gb|EEF31197.1| conserved hypothetical protein [Ricinus communis]
Length = 122
Score = 62.0 bits (149), Expect = 6e-07, Method: Composition-based stats.
Identities = 32/74 (43%), Positives = 48/74 (64%)
Query: 51 VFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMRHS 110
V++L+ + KVGS+IG+ G +++ ET A I+I D P +RIV+IS +E E S
Sbjct: 28 VYRLIVPVAKVGSIIGRKGELIKKMCVETRARIRILDGPPSISDRIVLISGKEEPEAALS 87
Query: 111 PAQDAVMRVHSRIA 124
PA DAV+RV R++
Sbjct: 88 PAMDAVLRVFKRVS 101
>gi|118086587|ref|XP_419049.2| PREDICTED: poly(rC)-binding protein 3 [Gallus gallus]
Length = 448
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 44/133 (33%), Positives = 66/133 (49%), Gaps = 26/133 (19%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMRH 109
+ +LL H +VGS+IGK G V+ + E+GA I I++ ERIV I+
Sbjct: 17 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE--GSCPERIVTITG-------- 66
Query: 110 SPAQDAVMRVHSRIAEIGFEPGQA-------------VVARLLVHSQQIGCLLGRGGHIV 156
DA+ + S IA + FE V RL+V + Q G L+G+GG +
Sbjct: 67 --PTDAIFKAFSMIA-LKFEEDINASMTNSTVTSKPPVTLRLVVPASQCGSLIGKGGSKI 123
Query: 157 SEMRRATGASIRV 169
E+R +TGA ++V
Sbjct: 124 KEIRESTGAQVQV 136
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 44/81 (54%), Gaps = 11/81 (13%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIA-DILPDSEERIVVISARENSEMR 108
V +L+ + GSLIGKGGS ++ + TGA +++A D+LP+S ER V IS
Sbjct: 101 VTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNSTERAVTISGTP----- 155
Query: 109 HSPAQDAVMRVHSRIAEIGFE 129
DA+++ +I + E
Sbjct: 156 -----DAIIQCVKQICVVMLE 171
Score = 40.8 bits (94), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 36/65 (55%)
Query: 354 EVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATEGVVMVSGTSDQMRAAQSL 413
E+ IP + + G S ++ IRQ+SGA + + + G+ E V ++G+ + AQ L
Sbjct: 270 ELTIPNDLIGCIIGRQGSKINEIRQMSGAQIKIANATEGSAERQVTITGSPANISLAQYL 329
Query: 414 IHAFI 418
I+A +
Sbjct: 330 INASL 334
>gi|4235140|gb|AAD13116.1| RNA-binding protein Nova-2 [AA 29-492] [Homo sapiens]
Length = 464
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 81/186 (43%), Gaps = 37/186 (19%)
Query: 47 EEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIA---DILPDSEERIVVISARE 103
E E K+L GS+IGKGG + Q ETGA+IK++ D P + ER+ ++
Sbjct: 2 EGEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTA 61
Query: 104 NSEMRHSPAQDAVMRVHSRIAE---------------------IGFEPGQAVVARLLVHS 142
+A+ VHS IAE P +A A+L+V +
Sbjct: 62 ----------EALNAVHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVPN 111
Query: 143 QQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHI 202
G ++G+GG V + +GA +++ Q P + + +V V G V A+ I
Sbjct: 112 STAGLIIGKGGATVKAVMEQSGAWVQL---SQKPEGINLQERVVTVSGEPEQVHKAVSAI 168
Query: 203 TSRLRE 208
+++E
Sbjct: 169 VQKVQE 174
>gi|332215033|ref|XP_003256641.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2
isoform 4 [Nomascus leucogenys]
gi|397470079|ref|XP_003806661.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2
isoform 2 [Pan paniscus]
gi|179479950|gb|ACB86627.1| insulin-like 2 growth factor 2-binding protein 2 [Homo sapiens]
Length = 493
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 82/157 (52%), Gaps = 13/157 (8%)
Query: 46 YEEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADIL-PDSEERIVVISAREN 104
Y E+ + L VG++IGK G+ ++ GASIKIA PD ER+V+I+
Sbjct: 318 YPEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITGPPE 377
Query: 105 SEMRHSPAQDAVMRVHSRIAEIG-FEPGQAVV--ARLLVHSQQIGCLLGRGGHIVSEMRR 161
++ + A R+ ++ E F P + V A + V S G ++G+GG V+E++
Sbjct: 378 AQFK------AQGRIFGKLKEENFFNPKEEVKLEAHIRVPSSTAGRVIGKGGKTVNELQN 431
Query: 162 ATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDA 198
T A + + P+DQ P + IV++IG++ + Q A
Sbjct: 432 LTSAEV-IVPRDQTP--DENEEVIVRIIGHFFASQTA 465
>gi|119629731|gb|EAX09326.1| poly(rC) binding protein 3, isoform CRA_d [Homo sapiens]
Length = 393
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 67/123 (54%), Gaps = 6/123 (4%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMRH 109
+ +LL H +VGS+IGK G V+ + E+GA I I++ + ERIV I+ ++ +
Sbjct: 46 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE--GNCPERIVTITGPTDAIFK- 102
Query: 110 SPAQDAVMRVHSRIAEIGFEPGQA---VVARLLVHSQQIGCLLGRGGHIVSEMRRATGAS 166
+ A A I + P + V RL+V + Q G L+G+GG + E+R +TGA
Sbjct: 103 AFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQ 162
Query: 167 IRV 169
++V
Sbjct: 163 VQV 165
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 44/81 (54%), Gaps = 11/81 (13%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIA-DILPDSEERIVVISARENSEMR 108
V +L+ + GSLIGKGGS ++ + TGA +++A D+LP+S ER V IS
Sbjct: 130 VTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNSTERAVTISG------- 182
Query: 109 HSPAQDAVMRVHSRIAEIGFE 129
DA+++ +I + E
Sbjct: 183 ---TPDAIIQCVKQICVVMLE 200
Score = 44.7 bits (104), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 42/74 (56%)
Query: 350 STTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATEGVVMVSGTSDQMRA 409
++T E+ IP + + G + ++ IRQ+SGA + + + G++E + ++GT +
Sbjct: 315 ASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQITITGTPANISL 374
Query: 410 AQSLIHAFILCGVT 423
AQ LI+A + VT
Sbjct: 375 AQYLINARLTSEVT 388
>gi|356514579|ref|XP_003525983.1| PREDICTED: uncharacterized protein LOC100797476 [Glycine max]
Length = 554
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 103/232 (44%), Gaps = 40/232 (17%)
Query: 60 KVGSLIGKGGSIVRTFQNETGASIKIA---DILPDSEERIVVISARENSEMRHSPAQDAV 116
+VG +IGKGG ++ Q ++GA I+I D P+S R V E+ +P +A+
Sbjct: 94 RVGVIIGKGGETIKYLQLQSGAKIQITRDIDADPNSSTRTV--------ELMGTP--EAI 143
Query: 117 MRVHSRIAEIGFEP---GQAVVAR------------LLVHSQQIGCLLGRGGHIVSEMRR 161
I E+ E G +V R + + + ++G ++G+GG + M+
Sbjct: 144 SSAEKLINEVLAEAESGGSGIVTRRFTGQAGSDEFVMKIPNNKVGLIIGKGGETIKNMQA 203
Query: 162 ATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDA---LFHITSRLRETIFPMKRPG- 217
+TGA I+V P P S + +++ G ++ A ++ + S P G
Sbjct: 204 STGARIQVIPLHLPPGDTS-TERTLKIDGTPEQIESAKQLVYQVISGENRVRNPAMSGGY 262
Query: 218 PNNGHSYLPPFPEMPPPPF-RPRHNPASPGSYPSPVGPFHSMDRGMGPSQPF 268
P G+ PP PP P +P + PG+Y P P ++M P QP+
Sbjct: 263 PQQGYQSRPPSNWAPPAPTQQPGYGYVQPGAYSGPS-PQYNM-----PQQPY 308
>gi|326917277|ref|XP_003204927.1| PREDICTED: poly(rC)-binding protein 3-like [Meleagris gallopavo]
Length = 448
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 44/133 (33%), Positives = 66/133 (49%), Gaps = 26/133 (19%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMRH 109
+ +LL H +VGS+IGK G V+ + E+GA I I++ ERIV I+
Sbjct: 17 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE--GSCPERIVTITG-------- 66
Query: 110 SPAQDAVMRVHSRIAEIGFEPGQA-------------VVARLLVHSQQIGCLLGRGGHIV 156
DA+ + S IA + FE V RL+V + Q G L+G+GG +
Sbjct: 67 --PTDAIFKAFSMIA-LKFEEDINASMTNSSVTSKPPVTLRLVVPASQCGSLIGKGGSKI 123
Query: 157 SEMRRATGASIRV 169
E+R +TGA ++V
Sbjct: 124 KEIRESTGAQVQV 136
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 44/81 (54%), Gaps = 11/81 (13%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIA-DILPDSEERIVVISARENSEMR 108
V +L+ + GSLIGKGGS ++ + TGA +++A D+LP+S ER V IS
Sbjct: 101 VTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNSTERAVTISGTP----- 155
Query: 109 HSPAQDAVMRVHSRIAEIGFE 129
DA+++ +I + E
Sbjct: 156 -----DAIIQCVKQICVVMLE 171
Score = 40.8 bits (94), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 36/65 (55%)
Query: 354 EVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATEGVVMVSGTSDQMRAAQSL 413
E+ IP + + G S ++ IRQ+SGA + + + G+ E V ++G+ + AQ L
Sbjct: 270 ELTIPNDLIGCIIGRQGSKINEIRQMSGAQIKIANATEGSAERQVTITGSPANISLAQYL 329
Query: 414 IHAFI 418
I+A +
Sbjct: 330 INASL 334
>gi|332872312|ref|XP_001157899.2| PREDICTED: poly(rC)-binding protein 3 isoform 8 [Pan troglodytes]
gi|397506692|ref|XP_003823855.1| PREDICTED: poly(rC)-binding protein 3 isoform 1 [Pan paniscus]
gi|426393341|ref|XP_004062983.1| PREDICTED: poly(rC)-binding protein 3 [Gorilla gorilla gorilla]
Length = 371
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 67/123 (54%), Gaps = 6/123 (4%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMRH 109
+ +LL H +VGS+IGK G V+ + E+GA I I++ + ERIV I+ ++ +
Sbjct: 46 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE--GNCPERIVTITGPTDAIFK- 102
Query: 110 SPAQDAVMRVHSRIAEIGFEPGQA---VVARLLVHSQQIGCLLGRGGHIVSEMRRATGAS 166
+ A A I + P + V RL+V + Q G L+G+GG + E+R +TGA
Sbjct: 103 AFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQ 162
Query: 167 IRV 169
++V
Sbjct: 163 VQV 165
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 44/81 (54%), Gaps = 11/81 (13%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIA-DILPDSEERIVVISARENSEMR 108
V +L+ + GSLIGKGGS ++ + TGA +++A D+LP+S ER V IS
Sbjct: 130 VTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNSTERAVTISG------- 182
Query: 109 HSPAQDAVMRVHSRIAEIGFE 129
DA+++ +I + E
Sbjct: 183 ---TPDAIIQCVKQICVVMLE 200
Score = 44.7 bits (104), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 42/74 (56%)
Query: 350 STTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATEGVVMVSGTSDQMRA 409
++T E+ IP + + G + ++ IRQ+SGA + + + G++E + ++GT +
Sbjct: 293 ASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQITITGTPANISL 352
Query: 410 AQSLIHAFILCGVT 423
AQ LI+A + VT
Sbjct: 353 AQYLINARLTSEVT 366
>gi|332215037|ref|XP_003256643.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2
isoform 6 [Nomascus leucogenys]
Length = 542
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 82/157 (52%), Gaps = 13/157 (8%)
Query: 46 YEEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADIL-PDSEERIVVISAREN 104
Y E+ + L VG++IGK G+ ++ GASIKIA PD ER+V+I+
Sbjct: 367 YPEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITGPPE 426
Query: 105 SEMRHSPAQDAVMRVHSRIAEIG-FEPGQAVV--ARLLVHSQQIGCLLGRGGHIVSEMRR 161
++ + A R+ ++ E F P + V A + V S G ++G+GG V+E++
Sbjct: 427 AQFK------AQGRIFGKLKEENFFNPKEEVKLEAHIRVPSSTAGRVIGKGGKTVNELQN 480
Query: 162 ATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDA 198
T A + + P+DQ P + IV++IG++ + Q A
Sbjct: 481 LTSAEV-IVPRDQTP--DENEEVIVRIIGHFFASQTA 514
>gi|308798891|ref|XP_003074225.1| putative nucleic acid binding protein (ISS) [Ostreococcus tauri]
gi|116000397|emb|CAL50077.1| putative nucleic acid binding protein (ISS) [Ostreococcus tauri]
Length = 402
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 86/199 (43%), Gaps = 38/199 (19%)
Query: 51 VFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVI----------- 99
VF++LC +VG LIG+ G VR ETGA +K+ ER V+I
Sbjct: 17 VFRVLCAETRVGGLIGRQGKRVRGIVTETGAQVKVLASTARCHERAVLIFAPRARDGPGD 76
Query: 100 --SARENSE--MRHSPAQDAVMRVHSRIAEI-------------------GFEPGQA--- 133
+ARE + +R+ AV A G + G++
Sbjct: 77 TCAAREGARRVVRYLTRARAVTEDECDGARDESEDESDDDDDGRRGDGVGGQDLGRSTAH 136
Query: 134 VVARLLVHSQQIGCLLGRGGHIVSEMR-RATGASIRVFPKDQAPRCGSPHDEIVQVIGNY 192
V RLLV + Q G L+G+GG + E+R RA GA + V Q P C + D +V++ G
Sbjct: 137 VTLRLLVPAGQAGHLIGKGGENIQEVRKRANGAHVAVQEVGQVPPCATSEDRVVEIHGKP 196
Query: 193 HSVQDALFHITSRLRETIF 211
V+ A + L++ +
Sbjct: 197 KDVRVAADAVFESLKDYLV 215
>gi|384947752|gb|AFI37481.1| poly(rC)-binding protein 3 isoform 1 [Macaca mulatta]
Length = 370
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 67/123 (54%), Gaps = 6/123 (4%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMRH 109
+ +LL H +VGS+IGK G V+ + E+GA I I++ + ERIV I+ ++ +
Sbjct: 46 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE--GNCPERIVTITGPTDAIFK- 102
Query: 110 SPAQDAVMRVHSRIAEIGFEPGQA---VVARLLVHSQQIGCLLGRGGHIVSEMRRATGAS 166
+ A A I + P + V RL+V + Q G L+G+GG + E+R +TGA
Sbjct: 103 AFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQ 162
Query: 167 IRV 169
++V
Sbjct: 163 VQV 165
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 44/81 (54%), Gaps = 11/81 (13%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIA-DILPDSEERIVVISARENSEMR 108
V +L+ + GSLIGKGGS ++ + TGA +++A D+LP+S ER V IS
Sbjct: 130 VTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNSTERAVTISG------- 182
Query: 109 HSPAQDAVMRVHSRIAEIGFE 129
DA+++ +I + E
Sbjct: 183 ---TPDAIIQCVKQICVVMLE 200
Score = 44.7 bits (104), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 42/74 (56%)
Query: 350 STTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATEGVVMVSGTSDQMRA 409
++T E+ IP + + G + ++ IRQ+SGA + + + G++E + ++GT +
Sbjct: 292 ASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQITITGTPANISL 351
Query: 410 AQSLIHAFILCGVT 423
AQ LI+A + VT
Sbjct: 352 AQYLINARLTSEVT 365
>gi|327275209|ref|XP_003222366.1| PREDICTED: poly(rC)-binding protein 3-like [Anolis carolinensis]
Length = 461
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 66/133 (49%), Gaps = 26/133 (19%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMRH 109
+ +LL H +VGS+IGK G V+ + E+GA I I++ ERIV I+
Sbjct: 17 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE--GSCPERIVTITG-------- 66
Query: 110 SPAQDAVMRVHSRIAEIGFEPGQA-------------VVARLLVHSQQIGCLLGRGGHIV 156
DA+ + S IA + FE V RL++ + Q G L+G+GG +
Sbjct: 67 --PTDAIFKAFSMIA-LKFEEDINASMTNSTVTSKPPVTLRLVIPASQCGSLIGKGGSKI 123
Query: 157 SEMRRATGASIRV 169
E+R +TGA ++V
Sbjct: 124 KEIRESTGAQVQV 136
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 44/81 (54%), Gaps = 11/81 (13%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIA-DILPDSEERIVVISARENSEMR 108
V +L+ + GSLIGKGGS ++ + TGA +++A D+LP+S ER V IS
Sbjct: 101 VTLRLVIPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNSTERAVTISGTP----- 155
Query: 109 HSPAQDAVMRVHSRIAEIGFE 129
DA+++ +I + E
Sbjct: 156 -----DAIIQCVKQICVVMLE 171
Score = 40.8 bits (94), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 36/65 (55%)
Query: 354 EVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATEGVVMVSGTSDQMRAAQSL 413
E+ IP + + G S ++ IRQ+SGA + + + G+ E V ++G+ + AQ L
Sbjct: 286 ELTIPNDLIGCIIGRQGSKINEIRQMSGAQIKIANATEGSAERQVTITGSPANISLAQYL 345
Query: 414 IHAFI 418
I+A +
Sbjct: 346 INASL 350
>gi|397470081|ref|XP_003806662.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2
isoform 3 [Pan paniscus]
gi|179479866|gb|ACB86625.1| insulin-like 2 growth factor 2-binding protein 2 [Homo sapiens]
Length = 542
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 82/157 (52%), Gaps = 13/157 (8%)
Query: 46 YEEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADIL-PDSEERIVVISAREN 104
Y E+ + L VG++IGK G+ ++ GASIKIA PD ER+V+I+
Sbjct: 367 YPEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITGPPE 426
Query: 105 SEMRHSPAQDAVMRVHSRIAEIG-FEPGQAVV--ARLLVHSQQIGCLLGRGGHIVSEMRR 161
++ + A R+ ++ E F P + V A + V S G ++G+GG V+E++
Sbjct: 427 AQFK------AQGRIFGKLKEENFFNPKEEVKLEAHIRVPSSTAGRVIGKGGKTVNELQN 480
Query: 162 ATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDA 198
T A + + P+DQ P + IV++IG++ + Q A
Sbjct: 481 LTSAEV-IVPRDQTP--DENEEVIVRIIGHFFASQTA 514
>gi|114684793|ref|XP_001157578.1| PREDICTED: poly(rC)-binding protein 3 isoform 2 [Pan troglodytes]
gi|397506694|ref|XP_003823856.1| PREDICTED: poly(rC)-binding protein 3 isoform 2 [Pan paniscus]
gi|426393343|ref|XP_004062984.1| PREDICTED: poly(rC)-binding protein 3 [Gorilla gorilla gorilla]
Length = 351
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 67/123 (54%), Gaps = 6/123 (4%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMRH 109
+ +LL H +VGS+IGK G V+ + E+GA I I++ + ERIV I+ ++ +
Sbjct: 46 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE--GNCPERIVTITGPTDAIFK- 102
Query: 110 SPAQDAVMRVHSRIAEIGFEPGQA---VVARLLVHSQQIGCLLGRGGHIVSEMRRATGAS 166
+ A A I + P + V RL+V + Q G L+G+GG + E+R +TGA
Sbjct: 103 AFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQ 162
Query: 167 IRV 169
++V
Sbjct: 163 VQV 165
Score = 44.3 bits (103), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 42/74 (56%)
Query: 350 STTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATEGVVMVSGTSDQMRA 409
++T E+ IP + + G + ++ IRQ+SGA + + + G++E + ++GT +
Sbjct: 273 ASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQITITGTPANISL 332
Query: 410 AQSLIHAFILCGVT 423
AQ LI+A + VT
Sbjct: 333 AQYLINARLTSEVT 346
>gi|440894425|gb|ELR46887.1| Poly(rC)-binding protein 3 [Bos grunniens mutus]
Length = 374
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 67/123 (54%), Gaps = 6/123 (4%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMRH 109
+ +LL H +VGS+IGK G V+ + E+GA I I++ + ERIV I+ ++ +
Sbjct: 49 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE--GNCPERIVTITGPTDAIFK- 105
Query: 110 SPAQDAVMRVHSRIAEIGFEPGQA---VVARLLVHSQQIGCLLGRGGHIVSEMRRATGAS 166
+ A A I + P + V RL+V + Q G L+G+GG + E+R +TGA
Sbjct: 106 AFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQ 165
Query: 167 IRV 169
++V
Sbjct: 166 VQV 168
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 44/81 (54%), Gaps = 11/81 (13%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIA-DILPDSEERIVVISARENSEMR 108
V +L+ + GSLIGKGGS ++ + TGA +++A D+LP+S ER V IS
Sbjct: 133 VTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNSTERAVTISG------- 185
Query: 109 HSPAQDAVMRVHSRIAEIGFE 129
DA+++ +I + E
Sbjct: 186 ---TPDAIIQCVKQICVVMLE 203
Score = 44.3 bits (103), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 42/74 (56%)
Query: 350 STTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATEGVVMVSGTSDQMRA 409
++T E+ IP + + G + ++ IRQ+SGA + + + G++E + ++GT +
Sbjct: 296 ASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQITITGTPANISL 355
Query: 410 AQSLIHAFILCGVT 423
AQ LI+A + VT
Sbjct: 356 AQYLINARLTSEVT 369
>gi|410970837|ref|XP_003991883.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2
isoform 2 [Felis catus]
Length = 493
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 82/157 (52%), Gaps = 13/157 (8%)
Query: 46 YEEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADIL-PDSEERIVVISAREN 104
Y E+ + L VG++IGK G+ ++ GASIKIA PD ER+V+I+
Sbjct: 318 YPEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITGPPE 377
Query: 105 SEMRHSPAQDAVMRVHSRIAEIG-FEPGQAVV--ARLLVHSQQIGCLLGRGGHIVSEMRR 161
++ + A R+ ++ E F P + V A + V S G ++G+GG V+E++
Sbjct: 378 AQFK------AQGRIFGKLKEENFFNPKEEVKLEAHIRVPSSTAGRVIGKGGKTVNELQN 431
Query: 162 ATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDA 198
T A + + P+DQ P + IV++IG++ + Q A
Sbjct: 432 LTSAEV-IVPRDQTP--DENEEVIVRIIGHFFASQTA 465
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 70/152 (46%), Gaps = 26/152 (17%)
Query: 48 EEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADI----LPDSEERIVV---IS 100
EE+ K+L H VG LIGK G ++ ++ETG I I+ + + + E I V +
Sbjct: 210 EEIPLKILAHNGLVGRLIGKEGRNLKKIEHETGTKITISSLQDLSIYNPERTITVKGTVE 269
Query: 101 ARENSE------MRHSPAQDAV-MRVHSRIAEIGFEPGQ------------AVVARLLVH 141
A N+E +R + D + + HS + P Q + L +
Sbjct: 270 ACANAEVEIMKKLREAFENDMLAVNTHSGYFSSLYPPHQFGPFPHHHSYPEQEIVNLFIP 329
Query: 142 SQQIGCLLGRGGHIVSEMRRATGASIRVFPKD 173
+Q +G ++G+ G + ++ R GASI++ P +
Sbjct: 330 TQAVGAIIGKKGAHIKQLARFAGASIKIAPAE 361
>gi|109042328|ref|XP_001095336.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2-like
isoform 5 [Macaca mulatta]
gi|402860699|ref|XP_003894760.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2
isoform 1 [Papio anubis]
Length = 599
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 82/157 (52%), Gaps = 13/157 (8%)
Query: 46 YEEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADIL-PDSEERIVVISAREN 104
Y E+ V L VG++IGK G+ ++ GASIKIA PD ER+V+I+
Sbjct: 424 YPEQEVVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITGPPE 483
Query: 105 SEMRHSPAQDAVMRVHSRIAEIG-FEPGQAVV--ARLLVHSQQIGCLLGRGGHIVSEMRR 161
++ + A R+ ++ E F P + V A + V S G ++G+GG V+E++
Sbjct: 484 AQFK------AQGRIFGKLKEENFFNPKEEVKLEAHIRVPSSTAGRVIGKGGKTVNELQN 537
Query: 162 ATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDA 198
T A + + P+DQ P + IV++IG++ + Q A
Sbjct: 538 LTSAEV-IVPRDQTP--DENEEVIVRIIGHFFASQTA 571
>gi|160773967|gb|AAI55088.1| Igf2bp2 protein [Danio rerio]
Length = 261
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 90/174 (51%), Gaps = 20/174 (11%)
Query: 47 EEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADI-LPDSEERIVVISARENS 105
E+EVV+ L VG++IGK G ++ GASIKIA PD +R+V+I+ +
Sbjct: 87 EQEVVY-LFIPTQAVGAIIGKKGQHIKQLARFAGASIKIAPAESPDVTQRMVIITGPPEA 145
Query: 106 EMRHSPAQDAVMRVHSRIAEIGFEPGQAVV---ARLLVHSQQIGCLLGRGGHIVSEMRRA 162
+ + A R+ ++ E F + V + V S G ++G+GG V+E++
Sbjct: 146 QFK------AQGRIFGKLKEENFFTAKEEVKLETHIKVPSSAAGRVIGKGGRTVNELQNL 199
Query: 163 TGASIRVFPKDQAPRCGSPHDEI-VQVIGNYHSVQDALFHITSRLRETIFPMKR 215
T A + + P+DQ P +DE+ V++ G++ + Q A ++RE I +K+
Sbjct: 200 TSAEV-IVPRDQTP---DENDEVFVKISGHFFASQTA----QRKIREIIQQVKQ 245
>gi|403297203|ref|XP_003939468.1| PREDICTED: poly(rC)-binding protein 3 isoform 1 [Saimiri
boliviensis boliviensis]
Length = 371
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 67/123 (54%), Gaps = 6/123 (4%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMRH 109
+ +LL H +VGS+IGK G V+ + E+GA I I++ + ERIV I+ ++ +
Sbjct: 46 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE--GNCPERIVTITGPTDAIFK- 102
Query: 110 SPAQDAVMRVHSRIAEIGFEPGQA---VVARLLVHSQQIGCLLGRGGHIVSEMRRATGAS 166
+ A A I + P + V RL+V + Q G L+G+GG + E+R +TGA
Sbjct: 103 AFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQ 162
Query: 167 IRV 169
++V
Sbjct: 163 VQV 165
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 44/81 (54%), Gaps = 11/81 (13%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIA-DILPDSEERIVVISARENSEMR 108
V +L+ + GSLIGKGGS ++ + TGA +++A D+LP+S ER V IS
Sbjct: 130 VTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNSTERAVTISG------- 182
Query: 109 HSPAQDAVMRVHSRIAEIGFE 129
DA+++ +I + E
Sbjct: 183 ---TPDAIIQCVKQICVVMLE 200
Score = 44.3 bits (103), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 42/74 (56%)
Query: 350 STTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATEGVVMVSGTSDQMRA 409
++T E+ IP + + G + ++ IRQ+SGA + + + G++E + ++GT +
Sbjct: 293 ASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQITITGTPANISL 352
Query: 410 AQSLIHAFILCGVT 423
AQ LI+A + VT
Sbjct: 353 AQYLINARLTSEVT 366
>gi|397493518|ref|XP_003817651.1| PREDICTED: RNA-binding protein Nova-2 [Pan paniscus]
Length = 349
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 81/186 (43%), Gaps = 37/186 (19%)
Query: 47 EEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIA---DILPDSEERIVVISARE 103
E E K+L GS+IGKGG + Q ETGA+IK++ D P + ER+ ++
Sbjct: 3 EGEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQG-- 60
Query: 104 NSEMRHSPAQDAVMRVHSRIAE---------------------IGFEPGQAVVARLLVHS 142
+A+ VHS IAE P +A A+L+V +
Sbjct: 61 --------TAEALNAVHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVPN 112
Query: 143 QQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHI 202
G ++G+GG V + +GA +++ Q P + + +V V G V A+ I
Sbjct: 113 STAGLIIGKGGATVKAVMEQSGAWVQL---SQKPEGINLQERVVTVSGEPEQVHKAVSAI 169
Query: 203 TSRLRE 208
+++E
Sbjct: 170 VQKVQE 175
>gi|345796405|ref|XP_535832.3| PREDICTED: insulin-like growth factor 2 mRNA binding protein 2
isoform 2 [Canis lupus familiaris]
Length = 531
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 82/157 (52%), Gaps = 13/157 (8%)
Query: 46 YEEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADIL-PDSEERIVVISAREN 104
Y E+ + L VG++IGK G+ ++ GASIKIA PD ER+V+I+
Sbjct: 356 YPEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITGPPE 415
Query: 105 SEMRHSPAQDAVMRVHSRIAEIG-FEPGQAVV--ARLLVHSQQIGCLLGRGGHIVSEMRR 161
++ + A R+ ++ E F P + V A + V S G ++G+GG V+E++
Sbjct: 416 AQFK------AQGRIFGKLKEENFFNPKEEVKLEAHIRVPSSTAGRVIGKGGKTVNELQN 469
Query: 162 ATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDA 198
T A + + P+DQ P + IV++IG++ + Q A
Sbjct: 470 LTSAEV-IVPRDQTP--DENEEVIVRIIGHFFASQTA 503
>gi|395839829|ref|XP_003792778.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2
isoform 3 [Otolemur garnettii]
Length = 575
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 82/157 (52%), Gaps = 13/157 (8%)
Query: 46 YEEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADIL-PDSEERIVVISAREN 104
Y E+ + L VG++IGK G+ ++ GASIKIA PD ER+V+I+
Sbjct: 400 YPEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITGPPE 459
Query: 105 SEMRHSPAQDAVMRVHSRIAEIG-FEPGQAVV--ARLLVHSQQIGCLLGRGGHIVSEMRR 161
++ + A R+ ++ E F P + V A + V S G ++G+GG V+E++
Sbjct: 460 AQFK------AQGRIFGKLKEENFFNPKEEVKLEAHIRVPSSTAGRVIGKGGKTVNELQN 513
Query: 162 ATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDA 198
T A + + P+DQ P + IV++IG++ + Q A
Sbjct: 514 LTSAEV-IVPRDQTP--DENEEVIVRIIGHFFASQTA 547
>gi|171906586|ref|NP_067543.2| poly(rC)-binding protein 3 [Mus musculus]
gi|296439279|sp|P57722.3|PCBP3_MOUSE RecName: Full=Poly(rC)-binding protein 3; AltName: Full=Alpha-CP3
gi|26348076|dbj|BAC37686.1| unnamed protein product [Mus musculus]
gi|148699881|gb|EDL31828.1| poly(rC) binding protein 3, isoform CRA_a [Mus musculus]
gi|148699882|gb|EDL31829.1| poly(rC) binding protein 3, isoform CRA_a [Mus musculus]
gi|148699883|gb|EDL31830.1| poly(rC) binding protein 3, isoform CRA_a [Mus musculus]
gi|148699888|gb|EDL31835.1| poly(rC) binding protein 3, isoform CRA_a [Mus musculus]
Length = 371
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 67/123 (54%), Gaps = 6/123 (4%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMRH 109
+ +LL H +VGS+IGK G V+ + E+GA I I++ + ERIV I+ ++ +
Sbjct: 46 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE--GNCPERIVTITGPTDAIFK- 102
Query: 110 SPAQDAVMRVHSRIAEIGFEPGQA---VVARLLVHSQQIGCLLGRGGHIVSEMRRATGAS 166
+ A A I + P + V RL+V + Q G L+G+GG + E+R +TGA
Sbjct: 103 AFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQ 162
Query: 167 IRV 169
++V
Sbjct: 163 VQV 165
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 44/81 (54%), Gaps = 11/81 (13%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIA-DILPDSEERIVVISARENSEMR 108
V +L+ + GSLIGKGGS ++ + TGA +++A D+LP+S ER V IS
Sbjct: 130 VTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNSTERAVTISG------- 182
Query: 109 HSPAQDAVMRVHSRIAEIGFE 129
DA+++ +I + E
Sbjct: 183 ---TPDAIIQCVKQICVVMLE 200
Score = 44.3 bits (103), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 42/74 (56%)
Query: 350 STTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATEGVVMVSGTSDQMRA 409
++T E+ IP + + G + ++ IRQ+SGA + + + G++E + ++GT +
Sbjct: 293 ASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQITITGTPANISL 352
Query: 410 AQSLIHAFILCGVT 423
AQ LI+A + VT
Sbjct: 353 AQYLINARLTSEVT 366
>gi|82540955|ref|XP_724754.1| RNA-binding protein Nova-2 [Plasmodium yoelii yoelii 17XNL]
gi|23479512|gb|EAA16319.1| RNA-binding protein Nova-2 [Plasmodium yoelii yoelii]
Length = 338
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 83/156 (53%), Gaps = 21/156 (13%)
Query: 53 KLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIA---DILPDSEERIVVISARENSEMRH 109
K+L + GS+IGK G I+ +N+TG S+K++ P++++R++VI ++
Sbjct: 22 KMLINNLVAGSIIGKNGEIISGIENKTGCSLKLSPNNSFFPNTQKRVLVICGKK------ 75
Query: 110 SPAQDAVMRVHSRIAEIGF-------EPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRA 162
+ V+ + +I +I + + R++V + ++G+GG+ + +++
Sbjct: 76 KQINNVVLIILDKIRQISSLANNKNEKKIKTYTCRIVVPKSAVSAIIGKGGYQIKQLQNK 135
Query: 163 TGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDA 198
TG I+V ++ CG ++ I+ ++G++ S++D
Sbjct: 136 TGTKIQVSNRE----CG-LYERIITIVGSFASIKDT 166
>gi|116787292|gb|ABK24450.1| unknown [Picea sitchensis]
Length = 357
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 88/191 (46%), Gaps = 16/191 (8%)
Query: 28 GYSSGPGHETVGGRNRMFYE-------EEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETG 80
GYS+ P R+ + YE +LL GS+IGKGG+ V FQ ++G
Sbjct: 19 GYSTSPSRSP--KRDGLIYEPSEDGSKTSSCLRLLVSNAAAGSVIGKGGATVSDFQTQSG 76
Query: 81 ASIKIA---DILPDSEERIVVISARENSEMRHSPAQDAVMRVHSRIAEIGFEPGQAVVAR 137
A I+++ + P + +RI++++ N + + A + ++ S + + R
Sbjct: 77 ARIQLSRNHEFFPGTTDRIILVTGSINEIL--TAANLILQKLLSEAEDNNDVDEKTSQVR 134
Query: 138 LLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQD 197
L++ + G ++G+GG + + ASI++ +DQ D +V + G
Sbjct: 135 LVLPNSVCGGIIGKGGATIKSFVEHSQASIKLSSQDQI--LPGVSDRLVTITGTLEQQLR 192
Query: 198 ALFHITSRLRE 208
A+F I S+L E
Sbjct: 193 AIFLIVSKLAE 203
>gi|27503479|gb|AAH42440.1| Pcbp3 protein [Mus musculus]
Length = 249
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 67/123 (54%), Gaps = 6/123 (4%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMRH 109
+ +LL H +VGS+IGK G V+ + E+GA I I++ + ERIV I+ ++ +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE--GNCPERIVTITGPTDAIFK- 70
Query: 110 SPAQDAVMRVHSRIAEIGFEPGQA---VVARLLVHSQQIGCLLGRGGHIVSEMRRATGAS 166
+ A A I + P + V RL+V + Q G L+G+GG + E+R +TGA
Sbjct: 71 AFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQ 130
Query: 167 IRV 169
++V
Sbjct: 131 VQV 133
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 44/81 (54%), Gaps = 11/81 (13%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIA-DILPDSEERIVVISARENSEMR 108
V +L+ + GSLIGKGGS ++ + TGA +++A D+LP+S ER V IS
Sbjct: 98 VTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNSTERAVTISG------- 150
Query: 109 HSPAQDAVMRVHSRIAEIGFE 129
DA+++ +I + E
Sbjct: 151 ---TPDAIIQCVKQICVVMLE 168
>gi|403297205|ref|XP_003939469.1| PREDICTED: poly(rC)-binding protein 3 isoform 2 [Saimiri
boliviensis boliviensis]
Length = 351
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 67/123 (54%), Gaps = 6/123 (4%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMRH 109
+ +LL H +VGS+IGK G V+ + E+GA I I++ + ERIV I+ ++ +
Sbjct: 46 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE--GNCPERIVTITGPTDAIFK- 102
Query: 110 SPAQDAVMRVHSRIAEIGFEPGQA---VVARLLVHSQQIGCLLGRGGHIVSEMRRATGAS 166
+ A A I + P + V RL+V + Q G L+G+GG + E+R +TGA
Sbjct: 103 AFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQ 162
Query: 167 IRV 169
++V
Sbjct: 163 VQV 165
Score = 44.3 bits (103), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 42/74 (56%)
Query: 350 STTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATEGVVMVSGTSDQMRA 409
++T E+ IP + + G + ++ IRQ+SGA + + + G++E + ++GT +
Sbjct: 273 ASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQITITGTPANISL 332
Query: 410 AQSLIHAFILCGVT 423
AQ LI+A + VT
Sbjct: 333 AQYLINARLTSEVT 346
>gi|395839831|ref|XP_003792779.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2
isoform 4 [Otolemur garnettii]
Length = 574
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 82/157 (52%), Gaps = 13/157 (8%)
Query: 46 YEEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADIL-PDSEERIVVISAREN 104
Y E+ + L VG++IGK G+ ++ GASIKIA PD ER+V+I+
Sbjct: 399 YPEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITGPPE 458
Query: 105 SEMRHSPAQDAVMRVHSRIAEIG-FEPGQAVV--ARLLVHSQQIGCLLGRGGHIVSEMRR 161
++ + A R+ ++ E F P + V A + V S G ++G+GG V+E++
Sbjct: 459 AQFK------AQGRIFGKLKEENFFNPKEEVKLEAHIRVPSSTAGRVIGKGGKTVNELQN 512
Query: 162 ATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDA 198
T A + + P+DQ P + IV++IG++ + Q A
Sbjct: 513 LTSAEV-IVPRDQTP--DENEEVIVRIIGHFFASQTA 546
>gi|388503270|gb|AFK39701.1| unknown [Medicago truncatula]
Length = 110
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 49/68 (72%)
Query: 351 TTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATEGVVMVSGTSDQMRAA 410
+T+E+V+P + V G+ +NL++IR+ISGA V +++ K + V ++SGTS++ RAA
Sbjct: 40 STLEMVVPANAVGKVMGKGGANLANIRKISGATVEISESKSYRGDRVALISGTSEEKRAA 99
Query: 411 QSLIHAFI 418
++LI AFI
Sbjct: 100 ENLIQAFI 107
>gi|355560220|gb|EHH16906.1| hypothetical protein EGK_13160 [Macaca mulatta]
Length = 361
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 67/132 (50%), Gaps = 24/132 (18%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMRH 109
+ +LL H +VGS+IGK G V+ + E+GA I I++ + ERIV I+
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE--GNCPERIVTITG-------- 63
Query: 110 SPAQDAVMRVHSRIA---------EIGFEPGQA---VVARLLVHSQQIGCLLGRGGHIVS 157
DA+ + + IA + P + V RL+V + Q G L+G+GG +
Sbjct: 64 --PTDAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIK 121
Query: 158 EMRRATGASIRV 169
E+R +TGA ++V
Sbjct: 122 EIRESTGAQVQV 133
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 44/81 (54%), Gaps = 11/81 (13%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIA-DILPDSEERIVVISARENSEMR 108
V +L+ + GSLIGKGGS ++ + TGA +++A D+LP+S ER V IS
Sbjct: 98 VTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNSTERAVTISG------- 150
Query: 109 HSPAQDAVMRVHSRIAEIGFE 129
DA+++ +I + E
Sbjct: 151 ---TPDAIIQCVKQICVVMLE 168
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 42/74 (56%)
Query: 350 STTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATEGVVMVSGTSDQMRA 409
++T E+ IP + + G + ++ IRQ+SGA + + + G++E + ++GT +
Sbjct: 283 ASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQITITGTPANISL 342
Query: 410 AQSLIHAFILCGVT 423
AQ LI+A + VT
Sbjct: 343 AQYLINARLTSEVT 356
>gi|291400299|ref|XP_002716509.1| PREDICTED: insulin-like growth factor 2 mRNA binding protein 2-like
isoform 1 [Oryctolagus cuniculus]
Length = 599
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 82/157 (52%), Gaps = 13/157 (8%)
Query: 46 YEEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADIL-PDSEERIVVISAREN 104
Y E+ + L VG++IGK G+ ++ GASIKIA PD ER+V+I+
Sbjct: 424 YPEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITGPPE 483
Query: 105 SEMRHSPAQDAVMRVHSRIAEIG-FEPGQAVV--ARLLVHSQQIGCLLGRGGHIVSEMRR 161
++ + A R+ ++ E F P + V A + V S G ++G+GG V+E++
Sbjct: 484 AQFK------AQGRIFGKLKEENFFNPKEEVKLEAHIRVPSSTAGRVIGKGGKTVNELQN 537
Query: 162 ATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDA 198
T A + + P+DQ P + IV++IG++ + Q A
Sbjct: 538 LTSAEV-IVPRDQTP--DENEEVIVRIIGHFFASQTA 571
>gi|354476790|ref|XP_003500606.1| PREDICTED: poly(rC)-binding protein 3 [Cricetulus griseus]
gi|149043674|gb|EDL97125.1| rCG61051, isoform CRA_a [Rattus norvegicus]
gi|149043675|gb|EDL97126.1| rCG61051, isoform CRA_a [Rattus norvegicus]
gi|149043676|gb|EDL97127.1| rCG61051, isoform CRA_a [Rattus norvegicus]
gi|149043677|gb|EDL97128.1| rCG61051, isoform CRA_a [Rattus norvegicus]
gi|344241934|gb|EGV98037.1| Poly(rC)-binding protein 3 [Cricetulus griseus]
Length = 371
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 67/123 (54%), Gaps = 6/123 (4%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMRH 109
+ +LL H +VGS+IGK G V+ + E+GA I I++ + ERIV I+ ++ +
Sbjct: 46 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE--GNCPERIVTITGPTDAIFK- 102
Query: 110 SPAQDAVMRVHSRIAEIGFEPGQA---VVARLLVHSQQIGCLLGRGGHIVSEMRRATGAS 166
+ A A I + P + V RL+V + Q G L+G+GG + E+R +TGA
Sbjct: 103 AFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQ 162
Query: 167 IRV 169
++V
Sbjct: 163 VQV 165
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 44/81 (54%), Gaps = 11/81 (13%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIA-DILPDSEERIVVISARENSEMR 108
V +L+ + GSLIGKGGS ++ + TGA +++A D+LP+S ER V IS
Sbjct: 130 VTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNSTERAVTISG------- 182
Query: 109 HSPAQDAVMRVHSRIAEIGFE 129
DA+++ +I + E
Sbjct: 183 ---TPDAIIQCVKQICVVMLE 200
Score = 44.3 bits (103), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 42/74 (56%)
Query: 350 STTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATEGVVMVSGTSDQMRA 409
++T E+ IP + + G + ++ IRQ+SGA + + + G++E + ++GT +
Sbjct: 293 ASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQITITGTPANISL 352
Query: 410 AQSLIHAFILCGVT 423
AQ LI+A + VT
Sbjct: 353 AQYLINARLTSEVT 366
>gi|338720838|ref|XP_001488421.3| PREDICTED: poly(rC)-binding protein 3 [Equus caballus]
Length = 393
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 67/123 (54%), Gaps = 6/123 (4%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMRH 109
+ +LL H +VGS+IGK G V+ + E+GA I I++ + ERIV I+ ++ +
Sbjct: 46 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE--GNCPERIVTITGPTDAIFK- 102
Query: 110 SPAQDAVMRVHSRIAEIGFEPGQA---VVARLLVHSQQIGCLLGRGGHIVSEMRRATGAS 166
+ A A I + P + V RL+V + Q G L+G+GG + E+R +TGA
Sbjct: 103 AFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQ 162
Query: 167 IRV 169
++V
Sbjct: 163 VQV 165
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 44/81 (54%), Gaps = 11/81 (13%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIA-DILPDSEERIVVISARENSEMR 108
V +L+ + GSLIGKGGS ++ + TGA +++A D+LP+S ER V IS
Sbjct: 130 VTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNSTERAVTISG------- 182
Query: 109 HSPAQDAVMRVHSRIAEIGFE 129
DA+++ +I + E
Sbjct: 183 ---TPDAIIQCVKQICVVMLE 200
Score = 44.3 bits (103), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 42/74 (56%)
Query: 350 STTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATEGVVMVSGTSDQMRA 409
++T E+ IP + + G + ++ IRQ+SGA + + + G++E + ++GT +
Sbjct: 315 ASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQITITGTPANISL 374
Query: 410 AQSLIHAFILCGVT 423
AQ LI+A + VT
Sbjct: 375 AQYLINARLTSEVT 388
>gi|396482778|ref|XP_003841545.1| similar to KH domain RNA binding protein [Leptosphaeria maculans
JN3]
gi|312218120|emb|CBX98066.1| similar to KH domain RNA binding protein [Leptosphaeria maculans
JN3]
Length = 488
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 85/375 (22%), Positives = 158/375 (42%), Gaps = 47/375 (12%)
Query: 60 KVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMRHSPAQDAVMRV 119
+ ++IGKGG V + +GA ++D + ERI+ +S + ++ S A ++R
Sbjct: 138 EAATIIGKGGENVTQIRRLSGAKCTVSDYSRGAVERILTVSGQVDAV---SKAFGLIVRT 194
Query: 120 HSR--IAEIGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAPR 177
++ + +A RLL+ IG ++G+ G + E++ A+ A + P
Sbjct: 195 LNQEDLETPSTSTSKAYPMRLLIPHILIGSIIGKAGVRIREIQEASNAKLNAS-DTLLPN 253
Query: 178 CGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKRPGPNNGHSY------------- 224
G + + V+G +V A++++ L E + +R G Y
Sbjct: 254 SG---ERSLVVLGVADAVHIAVYYVAQTLVEQL--TERFGGPAASQYATRSGMAANVVPG 308
Query: 225 -LPPFPEMPPPPFRPRHNPASPGSYPSPVGPFHSMDRGMGPSQPFDHQAAFSHGMDPMVP 283
+ P +P P +P + P+ P H G G AA HG P P
Sbjct: 309 GMSVQPYVPQPAGGQYSHPQNFRREPTQRTPAHG---GYG--------AAHMHGGQPPQP 357
Query: 284 PNSDRIPFPYGSERPGHGPTFDRPPSPRSWTPQGVGGGDPRGFDASSGFTPRNRPVESGN 343
PYG+ PG P + P +P S+ GG + G TP V S
Sbjct: 358 SPYGHPNMPYGAGSPGRAP-YGGPAAPTSY------GGHHAAAPVAHGSTPMQPAVGSMP 410
Query: 344 HAAILTSTTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATEGVVMVSGT 403
+ T ++ IP + + G+ + ++ IRQ+SG+ + +N+P + E +V ++GT
Sbjct: 411 GQPL----TQQIFIPNDMVGAIIGKGGAKINEIRQLSGSMIKINEPTDNSNERLVTITGT 466
Query: 404 SDQMRAAQSLIHAFI 418
+ + A ++++ +
Sbjct: 467 QECNQMALYMLYSRL 481
>gi|68071447|ref|XP_677637.1| hypothetical protein [Plasmodium berghei strain ANKA]
gi|56497827|emb|CAH98378.1| conserved hypothetical protein [Plasmodium berghei]
Length = 337
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 36/169 (21%), Positives = 85/169 (50%), Gaps = 25/169 (14%)
Query: 39 GGRNRMFYEEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIA---DILPDSEER 95
G N++ + + ++ LL GS+IGK G I+ +N+TG S+K++ P++++R
Sbjct: 13 GDTNQLCFVKMLINNLLA-----GSIIGKNGEIISGIENKTGCSLKLSPNNSFFPNTQKR 67
Query: 96 IVVISARENSEMRHSPAQDAVMRVHSRIAEIGF------EPGQAVVARLLVHSQQIGCLL 149
++VI ++ + ++ + +I +I Q R++V + ++
Sbjct: 68 VLVICGKQ------EQINNVIIIILDKIRQISLPNNKSENKIQTYTCRIVVPKSAVSAII 121
Query: 150 GRGGHIVSEMRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDA 198
G+GG+ + +++ TG I++ + R ++ I+ ++G + S++D
Sbjct: 122 GKGGYQIKQLQNITGTKIQI-----SNREYGLYERIITIVGPFESIKDT 165
>gi|395851184|ref|XP_003798146.1| PREDICTED: poly(rC)-binding protein 3 [Otolemur garnettii]
Length = 361
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 67/132 (50%), Gaps = 24/132 (18%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMRH 109
+ +LL H +VGS+IGK G V+ + E+GA I I++ + ERIV I+
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE--GNCPERIVTITG-------- 63
Query: 110 SPAQDAVMRVHSRIA---------EIGFEPGQA---VVARLLVHSQQIGCLLGRGGHIVS 157
DA+ + + IA + P + V RL+V + Q G L+G+GG +
Sbjct: 64 --PTDAIFKAFAMIAYKFEEDIVNSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIK 121
Query: 158 EMRRATGASIRV 169
E+R +TGA ++V
Sbjct: 122 EIRESTGAQVQV 133
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 44/81 (54%), Gaps = 11/81 (13%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIA-DILPDSEERIVVISARENSEMR 108
V +L+ + GSLIGKGGS ++ + TGA +++A D+LP+S ER V IS
Sbjct: 98 VTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNSTERAVTISG------- 150
Query: 109 HSPAQDAVMRVHSRIAEIGFE 129
DA+++ +I + E
Sbjct: 151 ---TPDAIIQCVKQICVVMLE 168
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 42/74 (56%)
Query: 350 STTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATEGVVMVSGTSDQMRA 409
++T E+ IP + + G + ++ IRQ+SGA + + + G++E + ++GT +
Sbjct: 283 ASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQITITGTPANISL 342
Query: 410 AQSLIHAFILCGVT 423
AQ LI+A + VT
Sbjct: 343 AQYLINARLTSEVT 356
>gi|109042331|ref|XP_001095005.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2-like
isoform 2 [Macaca mulatta]
gi|402860701|ref|XP_003894761.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2
isoform 2 [Papio anubis]
Length = 556
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 82/157 (52%), Gaps = 13/157 (8%)
Query: 46 YEEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADIL-PDSEERIVVISAREN 104
Y E+ V L VG++IGK G+ ++ GASIKIA PD ER+V+I+
Sbjct: 381 YPEQEVVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITGPPE 440
Query: 105 SEMRHSPAQDAVMRVHSRIAEIG-FEPGQAVV--ARLLVHSQQIGCLLGRGGHIVSEMRR 161
++ + A R+ ++ E F P + V A + V S G ++G+GG V+E++
Sbjct: 441 AQFK------AQGRIFGKLKEENFFNPKEEVKLEAHIRVPSSTAGRVIGKGGKTVNELQN 494
Query: 162 ATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDA 198
T A + + P+DQ P + IV++IG++ + Q A
Sbjct: 495 LTSAEV-IVPRDQTP--DENEEVIVRIIGHFFASQTA 528
>gi|156372967|ref|XP_001629306.1| predicted protein [Nematostella vectensis]
gi|156216303|gb|EDO37243.1| predicted protein [Nematostella vectensis]
Length = 419
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 65/122 (53%), Gaps = 12/122 (9%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMRH 109
++L G +IGKGG+ +R + E A + + D +S ER++ I+A S
Sbjct: 53 TTLRILIQSKDAGGIIGKGGTNIRRLRTEYNAVVNVPD--TNSNERVLTITAPRQS---- 106
Query: 110 SPAQDAVMRVHSRIAEIGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRV 169
A D + V +I E+ + G + ++LV Q+G ++GR G+ + E+R +GA+++V
Sbjct: 107 --ALDILAEVVPKIGEVQY--GHEI--QMLVQRSQVGSIIGRAGYKIKEIREGSGANVKV 160
Query: 170 FP 171
F
Sbjct: 161 FA 162
Score = 42.7 bits (99), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 43/89 (48%), Gaps = 9/89 (10%)
Query: 15 FHQRGYAPGYHSRGYSSGPGHETVGGRNRMFYEEEVVFKLLCHLDKVGSLIGKGGSIVRT 74
F G ++ G SSG T GG ++ ++ D GS+IGKGG ++
Sbjct: 318 FQAGGQMNQWNQGGASSGG--NTAGG-------DQTSTQVTIPKDLAGSIIGKGGERIKM 368
Query: 75 FQNETGASIKIADILPDSEERIVVISARE 103
+N A IKI D LP S +RI+ I+ +
Sbjct: 369 IRNRCNAVIKIDDPLPGSNDRIITITGNQ 397
Score = 42.4 bits (98), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 34/50 (68%), Gaps = 1/50 (2%)
Query: 52 FKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKI-ADILPDSEERIVVIS 100
++L +VGS+IG+ G ++ + +GA++K+ AD LP+S ER+V +S
Sbjct: 127 IQMLVQRSQVGSIIGRAGYKIKEIREGSGANVKVFADCLPNSTERVVTMS 176
Score = 41.6 bits (96), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 20/78 (25%), Positives = 40/78 (51%)
Query: 341 SGNHAAILTSTTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATEGVVMV 400
SG + A T+ +V IP+ + G+ + IR A + ++DP PG+ + ++ +
Sbjct: 334 SGGNTAGGDQTSTQVTIPKDLAGSIIGKGGERIKMIRNRCNAVIKIDDPLPGSNDRIITI 393
Query: 401 SGTSDQMRAAQSLIHAFI 418
+G +Q+ AQ L+ +
Sbjct: 394 TGNQEQINHAQYLLQQSV 411
>gi|301759723|ref|XP_002915742.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2-like
isoform 1 [Ailuropoda melanoleuca]
Length = 599
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 82/157 (52%), Gaps = 13/157 (8%)
Query: 46 YEEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADIL-PDSEERIVVISAREN 104
Y E+ + L VG++IGK G+ ++ GASIKIA PD ER+V+I+
Sbjct: 424 YPEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITGPPE 483
Query: 105 SEMRHSPAQDAVMRVHSRIAEIG-FEPGQAVV--ARLLVHSQQIGCLLGRGGHIVSEMRR 161
++ + A R+ ++ E F P + V A + V S G ++G+GG V+E++
Sbjct: 484 AQFK------AQGRIFGKLKEENFFNPKEEVKLEAHIRVPSSTAGRVIGKGGKTVNELQN 537
Query: 162 ATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDA 198
T A + + P+DQ P + IV++IG++ + Q A
Sbjct: 538 LTSAEV-IVPRDQTP--DENEEVIVRIIGHFFASQTA 571
>gi|332215027|ref|XP_003256638.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2
isoform 1 [Nomascus leucogenys]
Length = 599
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 82/157 (52%), Gaps = 13/157 (8%)
Query: 46 YEEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADIL-PDSEERIVVISAREN 104
Y E+ + L VG++IGK G+ ++ GASIKIA PD ER+V+I+
Sbjct: 424 YPEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITGPPE 483
Query: 105 SEMRHSPAQDAVMRVHSRIAEIG-FEPGQAVV--ARLLVHSQQIGCLLGRGGHIVSEMRR 161
++ + A R+ ++ E F P + V A + V S G ++G+GG V+E++
Sbjct: 484 AQFK------AQGRIFGKLKEENFFNPKEEVKLEAHIRVPSSTAGRVIGKGGKTVNELQN 537
Query: 162 ATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDA 198
T A + + P+DQ P + IV++IG++ + Q A
Sbjct: 538 LTSAEV-IVPRDQTP--DENEEVIVRIIGHFFASQTA 571
>gi|344306639|ref|XP_003421993.1| PREDICTED: poly(rC)-binding protein 3 [Loxodonta africana]
Length = 396
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 67/123 (54%), Gaps = 6/123 (4%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMRH 109
+ +LL H +VGS+IGK G V+ + E+GA I I++ + ERIV I+ ++ +
Sbjct: 71 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE--GNCPERIVTITGPTDAIFK- 127
Query: 110 SPAQDAVMRVHSRIAEIGFEPGQA---VVARLLVHSQQIGCLLGRGGHIVSEMRRATGAS 166
+ A A I + P + V RL+V + Q G L+G+GG + E+R +TGA
Sbjct: 128 AFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQ 187
Query: 167 IRV 169
++V
Sbjct: 188 VQV 190
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 44/81 (54%), Gaps = 11/81 (13%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIA-DILPDSEERIVVISARENSEMR 108
V +L+ + GSLIGKGGS ++ + TGA +++A D+LP+S ER V IS
Sbjct: 155 VTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNSTERAVTISG------- 207
Query: 109 HSPAQDAVMRVHSRIAEIGFE 129
DA+++ +I + E
Sbjct: 208 ---TPDAIIQCVKQICVVMLE 225
Score = 43.1 bits (100), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 42/74 (56%)
Query: 350 STTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATEGVVMVSGTSDQMRA 409
++T E+ IP + + G + ++ IRQ+SGA + + + G++E + ++G+ +
Sbjct: 318 ASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQITITGSPANISL 377
Query: 410 AQSLIHAFILCGVT 423
AQ LI+A + VT
Sbjct: 378 AQYLINARLTSEVT 391
>gi|115495373|ref|NP_001069752.1| poly(rC)-binding protein 3 [Bos taurus]
gi|301767382|ref|XP_002919105.1| PREDICTED: poly(rC)-binding protein 3-like [Ailuropoda melanoleuca]
gi|359323604|ref|XP_848733.3| PREDICTED: poly(rC)-binding protein 3 [Canis lupus familiaris]
gi|109659150|gb|AAI18167.1| Poly(rC) binding protein 3 [Bos taurus]
gi|296490840|tpg|DAA32953.1| TPA: poly(rC) binding protein 3 [Bos taurus]
Length = 361
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 67/132 (50%), Gaps = 24/132 (18%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMRH 109
+ +LL H +VGS+IGK G V+ + E+GA I I++ + ERIV I+
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE--GNCPERIVTITG-------- 63
Query: 110 SPAQDAVMRVHSRIA---------EIGFEPGQA---VVARLLVHSQQIGCLLGRGGHIVS 157
DA+ + + IA + P + V RL+V + Q G L+G+GG +
Sbjct: 64 --PTDAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIK 121
Query: 158 EMRRATGASIRV 169
E+R +TGA ++V
Sbjct: 122 EIRESTGAQVQV 133
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 44/81 (54%), Gaps = 11/81 (13%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIA-DILPDSEERIVVISARENSEMR 108
V +L+ + GSLIGKGGS ++ + TGA +++A D+LP+S ER V IS
Sbjct: 98 VTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNSTERAVTISG------- 150
Query: 109 HSPAQDAVMRVHSRIAEIGFE 129
DA+++ +I + E
Sbjct: 151 ---TPDAIIQCVKQICVVMLE 168
Score = 43.9 bits (102), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 42/74 (56%)
Query: 350 STTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATEGVVMVSGTSDQMRA 409
++T E+ IP + + G + ++ IRQ+SGA + + + G++E + ++GT +
Sbjct: 283 ASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQITITGTPANISL 342
Query: 410 AQSLIHAFILCGVT 423
AQ LI+A + VT
Sbjct: 343 AQYLINARLTSEVT 356
>gi|426217760|ref|XP_004003120.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2
isoform 1 [Ovis aries]
Length = 599
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 82/157 (52%), Gaps = 13/157 (8%)
Query: 46 YEEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADIL-PDSEERIVVISAREN 104
Y E+ + L VG++IGK G+ ++ GASIKIA PD ER+V+I+
Sbjct: 424 YPEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITGPPE 483
Query: 105 SEMRHSPAQDAVMRVHSRIAEIG-FEPGQAVV--ARLLVHSQQIGCLLGRGGHIVSEMRR 161
++ + A R+ ++ E F P + V A + V S G ++G+GG V+E++
Sbjct: 484 AQFK------AQGRIFGKLKEENFFNPKEEVKLEAHIRVPSSTAGRVIGKGGKTVNELQN 537
Query: 162 ATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDA 198
T A + + P+DQ P + IV++IG++ + Q A
Sbjct: 538 LTSAEV-IVPRDQTP--DENEEVIVRIIGHFFASQTA 571
>gi|340718655|ref|XP_003397779.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K-like [Bombus
terrestris]
Length = 466
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 86/172 (50%), Gaps = 21/172 (12%)
Query: 52 FKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSE--ERIVVISARENSEMRH 109
+LL GS+IGKGG + +++ ASI I+PD ER++ IS+ + ++
Sbjct: 63 LRLLIPSKVAGSIIGKGGQNITKLRSQYKASI----IVPDCPGPERVLTISSDLPTVLQ- 117
Query: 110 SPAQDAVMRVHSRIAEIGFEPG-QAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIR 168
+ V + E G G + R+LVH Q GC++G+GG + E+R TGA I+
Sbjct: 118 -----VLNEVVPNLEENGSRHGSDEIDVRMLVHQSQAGCIIGKGGLKIKELREKTGARIK 172
Query: 169 VFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKRPGPNN 220
++ + C D ++ + G ++ + + + + ++ + P+K G NN
Sbjct: 173 IY----SHCCPHSTDRLISICGKPNTCIECIRELIATIKTS--PLK--GVNN 216
Score = 42.7 bits (99), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 17/68 (25%), Positives = 38/68 (55%)
Query: 351 TTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATEGVVMVSGTSDQMRAA 410
TT +V IP+ + G+ + + +R SGA + +++P G+ + ++ ++G Q++ A
Sbjct: 392 TTTQVTIPKDLAGAIIGKGGARIRKVRSDSGAGITIDEPLSGSNDRIITITGLPSQIQMA 451
Query: 411 QSLIHAFI 418
Q L+ +
Sbjct: 452 QYLLQQSV 459
Score = 37.7 bits (86), Expect = 10.0, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 29/42 (69%)
Query: 59 DKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVIS 100
D G++IGKGG+ +R ++++GA I I + L S +RI+ I+
Sbjct: 401 DLAGAIIGKGGARIRKVRSDSGAGITIDEPLSGSNDRIITIT 442
>gi|297605767|ref|NP_001057572.2| Os06g0342500 [Oryza sativa Japonica Group]
gi|255677019|dbj|BAF19486.2| Os06g0342500 [Oryza sativa Japonica Group]
Length = 96
Score = 61.2 bits (147), Expect = 9e-07, Method: Composition-based stats.
Identities = 32/73 (43%), Positives = 47/73 (64%)
Query: 347 ILTSTTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATEGVVMVSGTSDQ 406
++T +T+EVVIP+ +A + S L+ I ++SGA V + D +P A E VV +SGT +Q
Sbjct: 15 LVTRSTLEVVIPKSAVASLTMRAGSKLAQISEMSGATVTLADERPDAIEKVVRISGTPEQ 74
Query: 407 MRAAQSLIHAFIL 419
AQSL+ FIL
Sbjct: 75 ADKAQSLLQGFIL 87
>gi|56566054|gb|AAV98363.1| poly(rC) binding protein 3 [Homo sapiens]
Length = 361
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 67/132 (50%), Gaps = 24/132 (18%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMRH 109
+ +LL H +VGS+IGK G V+ + E+GA I I++ + ERIV I+
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE--GNCPERIVTITG-------- 63
Query: 110 SPAQDAVMRVHSRIA---------EIGFEPGQA---VVARLLVHSQQIGCLLGRGGHIVS 157
DA+ + + IA + P + V RL+V + Q G L+G+GG +
Sbjct: 64 --PTDAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIK 121
Query: 158 EMRRATGASIRV 169
E+R +TGA ++V
Sbjct: 122 EIRESTGAQVQV 133
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 44/81 (54%), Gaps = 11/81 (13%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIA-DILPDSEERIVVISARENSEMR 108
V +L+ + GSLIGKGGS ++ + TGA +++A D+LP+S ER V IS
Sbjct: 98 VTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNSTERAVTISG------- 150
Query: 109 HSPAQDAVMRVHSRIAEIGFE 129
DA+++ +I + E
Sbjct: 151 ---TPDAIIQCVKQICVVMLE 168
Score = 43.9 bits (102), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 42/74 (56%)
Query: 350 STTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATEGVVMVSGTSDQMRA 409
++T E+ IP + + G + ++ IRQ+SGA + + + G++E + ++GT +
Sbjct: 283 ASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQITITGTPANISL 342
Query: 410 AQSLIHAFILCGVT 423
AQ LI+A + VT
Sbjct: 343 AQYLINARLTSEVT 356
>gi|345796407|ref|XP_003434167.1| PREDICTED: insulin-like growth factor 2 mRNA binding protein 2
isoform 1 [Canis lupus familiaris]
Length = 488
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 82/157 (52%), Gaps = 13/157 (8%)
Query: 46 YEEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADIL-PDSEERIVVISAREN 104
Y E+ + L VG++IGK G+ ++ GASIKIA PD ER+V+I+
Sbjct: 313 YPEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITGPPE 372
Query: 105 SEMRHSPAQDAVMRVHSRIAEIG-FEPGQAVV--ARLLVHSQQIGCLLGRGGHIVSEMRR 161
++ + A R+ ++ E F P + V A + V S G ++G+GG V+E++
Sbjct: 373 AQFK------AQGRIFGKLKEENFFNPKEEVKLEAHIRVPSSTAGRVIGKGGKTVNELQN 426
Query: 162 ATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDA 198
T A + + P+DQ P + IV++IG++ + Q A
Sbjct: 427 LTSAEV-IVPRDQTP--DENEEVIVRIIGHFFASQTA 460
Score = 46.6 bits (109), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 70/152 (46%), Gaps = 26/152 (17%)
Query: 48 EEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADI----LPDSEERIVV---IS 100
EE+ K+L H VG LIGK G ++ ++ETG I I+ + + + E I V +
Sbjct: 205 EEIPLKILAHNGLVGRLIGKEGRNLKKIEHETGTKITISSLQDLSIYNPERTITVKGTVE 264
Query: 101 ARENSE------MRHSPAQDAV-MRVHSRIAEIGFEPGQ------------AVVARLLVH 141
A N+E +R + D + + HS + P Q + L +
Sbjct: 265 ACANAEVEIMKKLREAFENDMLAVNTHSGYFSSLYPPHQFGPFPHHHSYPEQEIVNLFIP 324
Query: 142 SQQIGCLLGRGGHIVSEMRRATGASIRVFPKD 173
+Q +G ++G+ G + ++ R GASI++ P +
Sbjct: 325 TQAVGAIIGKKGAHIKQLARFAGASIKIAPAE 356
>gi|55742577|ref|NP_998282.1| poly(rC)-binding protein 4 [Danio rerio]
gi|33604078|gb|AAH56323.1| Zgc:65870 [Danio rerio]
gi|41946775|gb|AAH65955.1| Zgc:65870 [Danio rerio]
Length = 442
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 89/381 (23%), Positives = 157/381 (41%), Gaps = 72/381 (18%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMRH 109
+ +LL H +VGS+IGK G V+ + E+ A I I++ ERI+ I+
Sbjct: 5 LTLRLLMHGKEVGSIIGKKGETVKRIREESSARINISE--GSCPERIITITG-------- 54
Query: 110 SPAQDAVMRVHSRIAEIGFEPGQAVVA------------RLLVHSQQIGCLLGRGGHIVS 157
A + V R + I E A+VA RL++ + Q G L+G+GG +
Sbjct: 55 --ATECVFRAFTMITIKLEEDLAALVANGTVTSKPPVTLRLVIPASQCGSLIGKGGSKIK 112
Query: 158 EMRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKRPG 217
E+R TGA ++V D P + + V + G+ QDA+ + I ++ P
Sbjct: 113 EIREKTGAQVQV-AGDLLP---NSTERGVTISGS----QDAIIQCVKLICTVI--LESP- 161
Query: 218 PNNGHSYLPPFPEMPPPPFRPRHNPASPGSYPSPVGPFHSMDRGMGPSQPFDHQAAFSHG 277
P+ P+RP +PA PG+ + +Q F+ SH
Sbjct: 162 -----------PKGATIPYRP--SPA-PGAVL------------LAGNQVFETSEFASHP 195
Query: 278 MDPMVPPNSDRIPFPYGSERPGHGPTFDRPPSPRSWTPQGVGGGDPRGFDASSGFTPRNR 337
+ + D + Y + P + + QG+G P ++ P
Sbjct: 196 LFSVAQGGLD-LQQAYTVQNQYGIPHSELAKLHQLSMQQGLG---PIAQATATQVLPAG- 250
Query: 338 PVESGNHAAILTSTTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATEGV 397
+ES + A + E++IP + + G + ++ IRQ+SGA + + ++
Sbjct: 251 -IESSSQTA-----SQELLIPNDLIGSIIGRQGTKINEIRQVSGAQIKIGSQLDSTSDRH 304
Query: 398 VMVSGTSDQMRAAQSLIHAFI 418
V ++G+ + AQ LI + +
Sbjct: 305 VTITGSPISINLAQYLITSCL 325
Score = 38.9 bits (89), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 35/69 (50%), Gaps = 1/69 (1%)
Query: 352 TIEVVIPQLYMAHVYGENNSNLSHIRQISGANV-VVNDPKPGATEGVVMVSGTSDQMRAA 410
T+ +VIP + G+ S + IR+ +GA V V D P +TE V +SG+ D +
Sbjct: 90 TLRLVIPASQCGSLIGKGGSKIKEIREKTGAQVQVAGDLLPNSTERGVTISGSQDAIIQC 149
Query: 411 QSLIHAFIL 419
LI IL
Sbjct: 150 VKLICTVIL 158
>gi|9957165|gb|AAG09240.1|AF176329_1 alphaCP-3 [Homo sapiens]
Length = 339
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 67/132 (50%), Gaps = 24/132 (18%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMRH 109
+ +LL H +VGS+IGK G V+ + E+GA I I++ + ERIV I+
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE--GNCPERIVTITG-------- 63
Query: 110 SPAQDAVMRVHSRIA---------EIGFEPGQA---VVARLLVHSQQIGCLLGRGGHIVS 157
DA+ + + IA + P + V RL+V + Q G L+G+GG +
Sbjct: 64 --PTDAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIK 121
Query: 158 EMRRATGASIRV 169
E+R +TGA ++V
Sbjct: 122 EIRESTGAQVQV 133
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 44/81 (54%), Gaps = 11/81 (13%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIA-DILPDSEERIVVISARENSEMR 108
V +L+ + GSLIGKGGS ++ + TGA +++A D+LP+S ER V IS
Sbjct: 98 VTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNSTERAVTISG------- 150
Query: 109 HSPAQDAVMRVHSRIAEIGFE 129
DA+++ +I + E
Sbjct: 151 ---TPDAIIQCVKQICVVMLE 168
Score = 43.9 bits (102), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 42/74 (56%)
Query: 350 STTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATEGVVMVSGTSDQMRA 409
++T E+ IP + + G + ++ IRQ+SGA + + + G++E + ++GT +
Sbjct: 261 ASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQITITGTPANISL 320
Query: 410 AQSLIHAFILCGVT 423
AQ LI+A + VT
Sbjct: 321 AQYLINARLTSEVT 334
>gi|332215031|ref|XP_003256640.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2
isoform 3 [Nomascus leucogenys]
Length = 556
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 82/157 (52%), Gaps = 13/157 (8%)
Query: 46 YEEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADIL-PDSEERIVVISAREN 104
Y E+ + L VG++IGK G+ ++ GASIKIA PD ER+V+I+
Sbjct: 381 YPEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITGPPE 440
Query: 105 SEMRHSPAQDAVMRVHSRIAEIG-FEPGQAVV--ARLLVHSQQIGCLLGRGGHIVSEMRR 161
++ + A R+ ++ E F P + V A + V S G ++G+GG V+E++
Sbjct: 441 AQFK------AQGRIFGKLKEENFFNPKEEVKLEAHIRVPSSTAGRVIGKGGKTVNELQN 494
Query: 162 ATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDA 198
T A + + P+DQ P + IV++IG++ + Q A
Sbjct: 495 LTSAEV-IVPRDQTP--DENEEVIVRIIGHFFASQTA 528
>gi|332818640|ref|XP_001151234.2| PREDICTED: LOW QUALITY PROTEIN: insulin-like growth factor 2 mRNA
binding protein 2 isoform 7 [Pan troglodytes]
Length = 599
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 82/157 (52%), Gaps = 13/157 (8%)
Query: 46 YEEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADIL-PDSEERIVVISAREN 104
Y E+ + L VG++IGK G+ ++ GASIKIA PD ER+V+I+
Sbjct: 424 YPEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITGPPE 483
Query: 105 SEMRHSPAQDAVMRVHSRIAEIG-FEPGQAVV--ARLLVHSQQIGCLLGRGGHIVSEMRR 161
++ + A R+ ++ E F P + V A + V S G ++G+GG V+E++
Sbjct: 484 AQFK------AQGRIFGKLKEENFFNPKEEVKLEAHIRVPSSTAGRVIGKGGKTVNELQN 537
Query: 162 ATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDA 198
T A + + P+DQ P + IV++IG++ + Q A
Sbjct: 538 LTSAEV-IVPRDQTP--DENEEVIVRIIGHFFASQTA 571
>gi|300795407|ref|NP_001179433.1| insulin-like growth factor 2 mRNA-binding protein 2 [Bos taurus]
gi|296491332|tpg|DAA33395.1| TPA: insulin-like growth factor 2 mRNA binding protein 2 isoform 1
[Bos taurus]
Length = 599
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 82/157 (52%), Gaps = 13/157 (8%)
Query: 46 YEEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADIL-PDSEERIVVISAREN 104
Y E+ + L VG++IGK G+ ++ GASIKIA PD ER+V+I+
Sbjct: 424 YPEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITGPPE 483
Query: 105 SEMRHSPAQDAVMRVHSRIAEIG-FEPGQAVV--ARLLVHSQQIGCLLGRGGHIVSEMRR 161
++ + A R+ ++ E F P + V A + V S G ++G+GG V+E++
Sbjct: 484 AQFK------AQGRIFGKLKEENFFNPKEEVKLEAHIRVPSSTAGRVIGKGGKTVNELQN 537
Query: 162 ATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDA 198
T A + + P+DQ P + IV++IG++ + Q A
Sbjct: 538 LTSAEV-IVPRDQTP--DENEEVIVRIIGHFFASQTA 571
>gi|440899520|gb|ELR50813.1| Insulin-like growth factor 2 mRNA-binding protein 2 [Bos grunniens
mutus]
Length = 597
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 82/157 (52%), Gaps = 13/157 (8%)
Query: 46 YEEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADIL-PDSEERIVVISAREN 104
Y E+ + L VG++IGK G+ ++ GASIKIA PD ER+V+I+
Sbjct: 422 YPEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITGPPE 481
Query: 105 SEMRHSPAQDAVMRVHSRIAEIG-FEPGQAVV--ARLLVHSQQIGCLLGRGGHIVSEMRR 161
++ + A R+ ++ E F P + V A + V S G ++G+GG V+E++
Sbjct: 482 AQFK------AQGRIFGKLKEENFFNPKEEVKLEAHIRVPSSTAGRVIGKGGKTVNELQN 535
Query: 162 ATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDA 198
T A + + P+DQ P + IV++IG++ + Q A
Sbjct: 536 LTSAEV-IVPRDQTP--DENEEVIVRIIGHFFASQTA 569
>gi|148699884|gb|EDL31831.1| poly(rC) binding protein 3, isoform CRA_b [Mus musculus]
gi|148699885|gb|EDL31832.1| poly(rC) binding protein 3, isoform CRA_b [Mus musculus]
gi|148699886|gb|EDL31833.1| poly(rC) binding protein 3, isoform CRA_b [Mus musculus]
gi|148699889|gb|EDL31836.1| poly(rC) binding protein 3, isoform CRA_b [Mus musculus]
gi|148699890|gb|EDL31837.1| poly(rC) binding protein 3, isoform CRA_b [Mus musculus]
gi|149043678|gb|EDL97129.1| rCG61051, isoform CRA_b [Rattus norvegicus]
gi|149043679|gb|EDL97130.1| rCG61051, isoform CRA_b [Rattus norvegicus]
gi|149043680|gb|EDL97131.1| rCG61051, isoform CRA_b [Rattus norvegicus]
Length = 339
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 67/132 (50%), Gaps = 24/132 (18%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMRH 109
+ +LL H +VGS+IGK G V+ + E+GA I I++ + ERIV I+
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE--GNCPERIVTITG-------- 63
Query: 110 SPAQDAVMRVHSRIA---------EIGFEPGQA---VVARLLVHSQQIGCLLGRGGHIVS 157
DA+ + + IA + P + V RL+V + Q G L+G+GG +
Sbjct: 64 --PTDAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIK 121
Query: 158 EMRRATGASIRV 169
E+R +TGA ++V
Sbjct: 122 EIRESTGAQVQV 133
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 44/81 (54%), Gaps = 11/81 (13%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIA-DILPDSEERIVVISARENSEMR 108
V +L+ + GSLIGKGGS ++ + TGA +++A D+LP+S ER V IS
Sbjct: 98 VTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNSTERAVTISG------- 150
Query: 109 HSPAQDAVMRVHSRIAEIGFE 129
DA+++ +I + E
Sbjct: 151 ---TPDAIIQCVKQICVVMLE 168
Score = 43.9 bits (102), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 42/74 (56%)
Query: 350 STTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATEGVVMVSGTSDQMRA 409
++T E+ IP + + G + ++ IRQ+SGA + + + G++E + ++GT +
Sbjct: 261 ASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQITITGTPANISL 320
Query: 410 AQSLIHAFILCGVT 423
AQ LI+A + VT
Sbjct: 321 AQYLINARLTSEVT 334
>gi|431909188|gb|ELK12778.1| RNA-binding protein Nova-2 [Pteropus alecto]
Length = 334
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 83/192 (43%), Gaps = 37/192 (19%)
Query: 41 RNRMFYEEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIA---DILPDSEERIV 97
R+ E E K+L GS+IGKGG + Q ETGA+IK++ D P + ER+
Sbjct: 24 RSNTGEEGEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVC 83
Query: 98 VISARENSEMRHSPAQDAVMRVHSRIAE---------------------IGFEPGQAVVA 136
++ +A+ VHS IAE P +A A
Sbjct: 84 LVQG----------TAEALNAVHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQA 133
Query: 137 RLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQ 196
+L+V + G ++G+GG V + +GA +++ Q P + + +V V G V
Sbjct: 134 KLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQL---SQKPEGINLQERVVTVSGEPEQVH 190
Query: 197 DALFHITSRLRE 208
A+ I +++E
Sbjct: 191 KAVSAIVQKVQE 202
>gi|301759725|ref|XP_002915743.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2-like
isoform 2 [Ailuropoda melanoleuca]
Length = 556
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 82/157 (52%), Gaps = 13/157 (8%)
Query: 46 YEEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADIL-PDSEERIVVISAREN 104
Y E+ + L VG++IGK G+ ++ GASIKIA PD ER+V+I+
Sbjct: 381 YPEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITGPPE 440
Query: 105 SEMRHSPAQDAVMRVHSRIAEIG-FEPGQAVV--ARLLVHSQQIGCLLGRGGHIVSEMRR 161
++ + A R+ ++ E F P + V A + V S G ++G+GG V+E++
Sbjct: 441 AQFK------AQGRIFGKLKEENFFNPKEEVKLEAHIRVPSSTAGRVIGKGGKTVNELQN 494
Query: 162 ATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDA 198
T A + + P+DQ P + IV++IG++ + Q A
Sbjct: 495 LTSAEV-IVPRDQTP--DENEEVIVRIIGHFFASQTA 528
Score = 46.6 bits (109), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 70/152 (46%), Gaps = 26/152 (17%)
Query: 48 EEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADI----LPDSEERIVV---IS 100
EE+ K+L H VG LIGK G ++ ++ETG I I+ + + + E I V +
Sbjct: 273 EEIPLKILAHNGLVGRLIGKEGRNLKKIEHETGTKITISSLQDLSIYNPERTITVKGTVE 332
Query: 101 ARENSE------MRHSPAQDAV-MRVHSRIAEIGFEPGQ------------AVVARLLVH 141
A N+E +R + D + + HS + P Q + L +
Sbjct: 333 ACANAEVEIMKKLREAFENDMLAVNTHSGYFSSLYPPHQFGPFPHHHSYPEQEIVNLFIP 392
Query: 142 SQQIGCLLGRGGHIVSEMRRATGASIRVFPKD 173
+Q +G ++G+ G + ++ R GASI++ P +
Sbjct: 393 TQAVGAIIGKKGAHIKQLARFAGASIKIAPAE 424
>gi|395839833|ref|XP_003792780.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2
isoform 5 [Otolemur garnettii]
Length = 441
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 82/157 (52%), Gaps = 13/157 (8%)
Query: 46 YEEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADIL-PDSEERIVVISAREN 104
Y E+ + L VG++IGK G+ ++ GASIKIA PD ER+V+I+
Sbjct: 266 YPEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITGPPE 325
Query: 105 SEMRHSPAQDAVMRVHSRIAEIG-FEPGQAVV--ARLLVHSQQIGCLLGRGGHIVSEMRR 161
++ + A R+ ++ E F P + V A + V S G ++G+GG V+E++
Sbjct: 326 AQFK------AQGRIFGKLKEENFFNPKEEVKLEAHIRVPSSTAGRVIGKGGKTVNELQN 379
Query: 162 ATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDA 198
T A + + P+DQ P + IV++IG++ + Q A
Sbjct: 380 LTSAEV-IVPRDQTP--DENEEVIVRIIGHFFASQTA 413
>gi|64085377|ref|NP_006539.3| insulin-like growth factor 2 mRNA-binding protein 2 isoform a [Homo
sapiens]
gi|224471831|sp|Q9Y6M1.2|IF2B2_HUMAN RecName: Full=Insulin-like growth factor 2 mRNA-binding protein 2;
Short=IGF2 mRNA-binding protein 2; Short=IMP-2; AltName:
Full=Hepatocellular carcinoma autoantigen p62; AltName:
Full=IGF-II mRNA-binding protein 2; AltName: Full=VICKZ
family member 2
gi|119598617|gb|EAW78211.1| insulin-like growth factor 2 mRNA binding protein 2, isoform CRA_c
[Homo sapiens]
gi|158254760|dbj|BAF83353.1| unnamed protein product [Homo sapiens]
gi|410223074|gb|JAA08756.1| insulin-like growth factor 2 mRNA binding protein 2 [Pan
troglodytes]
gi|410251296|gb|JAA13615.1| insulin-like growth factor 2 mRNA binding protein 2 [Pan
troglodytes]
gi|410302886|gb|JAA30043.1| insulin-like growth factor 2 mRNA binding protein 2 [Pan
troglodytes]
gi|410342487|gb|JAA40190.1| insulin-like growth factor 2 mRNA binding protein 2 [Pan
troglodytes]
Length = 599
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 82/157 (52%), Gaps = 13/157 (8%)
Query: 46 YEEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADIL-PDSEERIVVISAREN 104
Y E+ + L VG++IGK G+ ++ GASIKIA PD ER+V+I+
Sbjct: 424 YPEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITGPPE 483
Query: 105 SEMRHSPAQDAVMRVHSRIAEIG-FEPGQAVV--ARLLVHSQQIGCLLGRGGHIVSEMRR 161
++ + A R+ ++ E F P + V A + V S G ++G+GG V+E++
Sbjct: 484 AQFK------AQGRIFGKLKEENFFNPKEEVKLEAHIRVPSSTAGRVIGKGGKTVNELQN 537
Query: 162 ATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDA 198
T A + + P+DQ P + IV++IG++ + Q A
Sbjct: 538 LTSAEV-IVPRDQTP--DENEEVIVRIIGHFFASQTA 571
>gi|296491333|tpg|DAA33396.1| TPA: insulin-like growth factor 2 mRNA binding protein 2 isoform 2
[Bos taurus]
Length = 556
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 82/157 (52%), Gaps = 13/157 (8%)
Query: 46 YEEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADIL-PDSEERIVVISAREN 104
Y E+ + L VG++IGK G+ ++ GASIKIA PD ER+V+I+
Sbjct: 381 YPEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITGPPE 440
Query: 105 SEMRHSPAQDAVMRVHSRIAEIG-FEPGQAVV--ARLLVHSQQIGCLLGRGGHIVSEMRR 161
++ + A R+ ++ E F P + V A + V S G ++G+GG V+E++
Sbjct: 441 AQFK------AQGRIFGKLKEENFFNPKEEVKLEAHIRVPSSTAGRVIGKGGKTVNELQN 494
Query: 162 ATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDA 198
T A + + P+DQ P + IV++IG++ + Q A
Sbjct: 495 LTSAEV-IVPRDQTP--DENEEVIVRIIGHFFASQTA 528
Score = 46.6 bits (109), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 70/152 (46%), Gaps = 26/152 (17%)
Query: 48 EEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADI----LPDSEERIVV---IS 100
EE+ K+L H VG LIGK G ++ ++ETG I I+ + + + E I V +
Sbjct: 273 EEIPLKILAHNGLVGRLIGKEGRNLKKIEHETGTKITISSLQDLSIYNPERTITVKGTVE 332
Query: 101 ARENSE------MRHSPAQDAV-MRVHSRIAEIGFEPGQ------------AVVARLLVH 141
A N+E +R + D + + HS + P Q + L +
Sbjct: 333 ACANAEIEIMKKLREAFENDMLAVNTHSGYFSSLYPPHQFGPFPHHHSYPEQEIVNLFIP 392
Query: 142 SQQIGCLLGRGGHIVSEMRRATGASIRVFPKD 173
+Q +G ++G+ G + ++ R GASI++ P +
Sbjct: 393 TQAVGAIIGKKGAHIKQLARFAGASIKIAPAE 424
>gi|410969851|ref|XP_003991405.1| PREDICTED: poly(rC)-binding protein 3 [Felis catus]
Length = 361
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 67/132 (50%), Gaps = 24/132 (18%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMRH 109
+ +LL H +VGS+IGK G V+ + E+GA I I++ + ERIV I+
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE--GNCPERIVTITG-------- 63
Query: 110 SPAQDAVMRVHSRIA---------EIGFEPGQA---VVARLLVHSQQIGCLLGRGGHIVS 157
DA+ + + IA + P + V RL+V + Q G L+G+GG +
Sbjct: 64 --PTDAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIK 121
Query: 158 EMRRATGASIRV 169
E+R +TGA ++V
Sbjct: 122 EIRESTGAQVQV 133
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 44/81 (54%), Gaps = 11/81 (13%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIA-DILPDSEERIVVISARENSEMR 108
V +L+ + GSLIGKGGS ++ + TGA +++A D+LP+S ER V IS
Sbjct: 98 VTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNSTERAVTISG------- 150
Query: 109 HSPAQDAVMRVHSRIAEIGFE 129
DA+++ +I + E
Sbjct: 151 ---TPDAIIQCVKQICVVMLE 168
Score = 43.9 bits (102), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 42/74 (56%)
Query: 350 STTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATEGVVMVSGTSDQMRA 409
++T E+ IP + + G + ++ IRQ+SGA + + + G++E + ++GT +
Sbjct: 283 ASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQITITGTPANISL 342
Query: 410 AQSLIHAFILCGVT 423
AQ LI+A + VT
Sbjct: 343 AQYLINARLTSEVT 356
>gi|307189125|gb|EFN73581.1| Insulin-like growth factor 2 mRNA-binding protein 1 [Camponotus
floridanus]
Length = 587
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 84/172 (48%), Gaps = 21/172 (12%)
Query: 59 DKVGSLIGKGGSIVRTFQNETGASIKIADILPD------SEERIVVISARENSEMRHSPA 112
+ VG++IG GS +R +GAS+KIA + D +E ++ +I + E+
Sbjct: 374 NSVGAIIGTKGSHIRNIIRFSGASVKIAPLEQDKPAEQQTERKVTIIGSPESQ------- 426
Query: 113 QDAVMRVHSRIAEIGFEPGQA---VVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRV 169
A + ++ E G+ G + +LV S Q+G ++G+GG V E++R TG+ I+
Sbjct: 427 WKAQYLIFEKMREEGYVAGTEDVRLTIEILVPSTQVGRIIGKGGQNVRELQRVTGSVIK- 485
Query: 170 FPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKRPGPNNG 221
+ QA + + V +IG + SVQ A R+R + PG +G
Sbjct: 486 LSEQQATPPSAEEETTVHIIGPFFSVQSA----QRRIRAMVLQSGTPGGTSG 533
Score = 45.4 bits (106), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 37/160 (23%), Positives = 72/160 (45%), Gaps = 10/160 (6%)
Query: 52 FKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKI--ADILPDSEERIVVISARENSEMRH 109
++L D VG++IG+ GS +R + A + + D + E+ I + EN
Sbjct: 149 LRILVQSDMVGAIIGRQGSTIRQITQVSRARVDVHRKDNVGSLEKAITIYGNPENCTNAC 208
Query: 110 SPAQDAVMRVHSRIAEIGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRV 169
D VM+ + G + ++L H+ IG ++G+GG+ + + + T + I V
Sbjct: 209 KKILD-VMQQEAASTNKG-----EITLKILAHNNLIGRIIGKGGNTIKRIMQDTDSKITV 262
Query: 170 FPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRET 209
+ + I+ V G ++ A I+S+LR++
Sbjct: 263 SSINDINSFN--LERIITVKGTIENMSKAESMISSKLRQS 300
>gi|226470354|emb|CAX70457.1| Heterogeneous nuclear ribonucleoprotein K [Schistosoma japonicum]
Length = 370
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 77/161 (47%), Gaps = 20/161 (12%)
Query: 49 EVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSE--ERIVVISARENSE 106
+V + L G +IGKGG ++ + E S+K+ +PDS ER++V+ S
Sbjct: 8 KVELRFLISTKAAGVIIGKGGENIKKIREE--YSVKVT--IPDSNGPERVLVLDGDLGS- 62
Query: 107 MRHSPAQDAVMRVHSRIAEIGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGA- 165
+ + ++ + V RLLVH Q GC++GRGG+ + E+R +G
Sbjct: 63 --------IIEIFRENLEKMQNNRDEGVDLRLLVHYSQAGCVIGRGGYKIKELREQSGLH 114
Query: 166 SIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRL 206
+++V+ C S D ++Q++G+ V + L I L
Sbjct: 115 TLKVYQM----LCPSSTDRVIQLVGDVGKVLNCLQSIAELL 151
>gi|426217762|ref|XP_004003121.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2
isoform 2 [Ovis aries]
Length = 556
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 82/157 (52%), Gaps = 13/157 (8%)
Query: 46 YEEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADIL-PDSEERIVVISAREN 104
Y E+ + L VG++IGK G+ ++ GASIKIA PD ER+V+I+
Sbjct: 381 YPEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITGPPE 440
Query: 105 SEMRHSPAQDAVMRVHSRIAEIG-FEPGQAVV--ARLLVHSQQIGCLLGRGGHIVSEMRR 161
++ + A R+ ++ E F P + V A + V S G ++G+GG V+E++
Sbjct: 441 AQFK------AQGRIFGKLKEENFFNPKEEVKLEAHIRVPSSTAGRVIGKGGKTVNELQN 494
Query: 162 ATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDA 198
T A + + P+DQ P + IV++IG++ + Q A
Sbjct: 495 LTSAEV-IVPRDQTP--DENEEVIVRIIGHFFASQTA 528
>gi|402862114|ref|XP_003895414.1| PREDICTED: poly(rC)-binding protein 3-like, partial [Papio anubis]
Length = 327
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 67/123 (54%), Gaps = 6/123 (4%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMRH 109
+ +LL H +VGS+IGK G V+ + E+GA I I++ + ERIV I+ ++ +
Sbjct: 46 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE--GNCPERIVTITGPTDAIFK- 102
Query: 110 SPAQDAVMRVHSRIAEIGFEPGQA---VVARLLVHSQQIGCLLGRGGHIVSEMRRATGAS 166
+ A A I + P + V RL+V + Q G L+G+GG + E+R +TGA
Sbjct: 103 AFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQ 162
Query: 167 IRV 169
++V
Sbjct: 163 VQV 165
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 35/52 (67%), Gaps = 1/52 (1%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIA-DILPDSEERIVVIS 100
V +L+ + GSLIGKGGS ++ + TGA +++A D+LP+S ER V IS
Sbjct: 130 VTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNSTERAVTIS 181
>gi|363737066|ref|XP_003641794.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2-like
[Gallus gallus]
Length = 564
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 81/155 (52%), Gaps = 13/155 (8%)
Query: 48 EEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADIL-PDSEERIVVISARENSE 106
E+ V L VG++IGK G ++ GASIKIA PD+ ER+V+I+ ++
Sbjct: 390 EQEVVNLFIPTQAVGAIIGKKGQHIKQLARFAGASIKIAPAEGPDATERMVIITGPPEAQ 449
Query: 107 MRHSPAQDAVMRVHSRIAEIG-FEPGQAVV--ARLLVHSQQIGCLLGRGGHIVSEMRRAT 163
+ A R+ ++ E F P + V A + V S G ++G+GG V+E++ T
Sbjct: 450 FK------AQGRIFGKLKEENFFNPKEEVKLEAHIKVPSFAAGRVIGKGGKTVNELQNLT 503
Query: 164 GASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDA 198
A + + P+DQ P + IV++IG++ + Q A
Sbjct: 504 SAEV-IVPRDQTP--DENEEVIVKIIGHFFASQTA 535
Score = 38.1 bits (87), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 34/159 (21%), Positives = 74/159 (46%), Gaps = 9/159 (5%)
Query: 52 FKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKI--ADILPDSEERIVVISARENSEMRH 109
++L VG++IGK G ++ +T + + I + +E+ I + + E
Sbjct: 183 LRMLVPTQFVGAIIGKEGLTIKNLTKQTQSKVDIHRKENAGAAEKPITIHATPEGC---- 238
Query: 110 SPAQDAVMRVHSRIAEIGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRV 169
S A ++ + + A+ + + + ++L H+ +G L+G+ G + ++ + TG I +
Sbjct: 239 SEACRMILDIMQKEAD-ETKSAEEIPLKILAHNSLVGRLIGKEGRNLKKIEQDTGTKITI 297
Query: 170 FPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRE 208
P Q +P + + V G+ + +A I +LRE
Sbjct: 298 SPL-QDLTIYNP-ERTITVKGSTEACSNAEVEIMKKLRE 334
>gi|291400301|ref|XP_002716510.1| PREDICTED: insulin-like growth factor 2 mRNA binding protein 2-like
isoform 2 [Oryctolagus cuniculus]
Length = 556
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 82/157 (52%), Gaps = 13/157 (8%)
Query: 46 YEEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADIL-PDSEERIVVISAREN 104
Y E+ + L VG++IGK G+ ++ GASIKIA PD ER+V+I+
Sbjct: 381 YPEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITGPPE 440
Query: 105 SEMRHSPAQDAVMRVHSRIAEIG-FEPGQAVV--ARLLVHSQQIGCLLGRGGHIVSEMRR 161
++ + A R+ ++ E F P + V A + V S G ++G+GG V+E++
Sbjct: 441 AQFK------AQGRIFGKLKEENFFNPKEEVKLEAHIRVPSSTAGRVIGKGGKTVNELQN 494
Query: 162 ATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDA 198
T A + + P+DQ P + IV++IG++ + Q A
Sbjct: 495 LTSAEV-IVPRDQTP--DENEEVIVRIIGHFFASQTA 528
>gi|350409768|ref|XP_003488838.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K-like [Bombus
impatiens]
Length = 439
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 86/172 (50%), Gaps = 21/172 (12%)
Query: 52 FKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSE--ERIVVISARENSEMRH 109
+LL GS+IGKGG + +++ ASI I+PD ER++ IS+ + ++
Sbjct: 77 LRLLIPSKVAGSIIGKGGQNITKLRSQYKASI----IVPDCPGPERVLTISSDLPTVLQ- 131
Query: 110 SPAQDAVMRVHSRIAEIGFEPG-QAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIR 168
+ V + E G G + R+LVH Q GC++G+GG + E+R TGA I+
Sbjct: 132 -----VLNEVVPNLEENGSRHGSDEIDVRMLVHQSQAGCIIGKGGLKIKELREKTGARIK 186
Query: 169 VFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKRPGPNN 220
++ + C D ++ + G ++ + + + + ++ + P+K G NN
Sbjct: 187 IY----SHCCPHSTDRLISICGKPNTCIECIRELIATIKTS--PLK--GVNN 230
Score = 42.7 bits (99), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 17/68 (25%), Positives = 38/68 (55%)
Query: 351 TTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATEGVVMVSGTSDQMRAA 410
TT +V IP+ + G+ + + +R SGA + +++P G+ + ++ ++G Q++ A
Sbjct: 365 TTTQVTIPKDLAGAIIGKGGARIRKVRSDSGAGITIDEPLSGSNDRIITITGLPSQIQMA 424
Query: 411 QSLIHAFI 418
Q L+ +
Sbjct: 425 QYLLQQSV 432
>gi|426218397|ref|XP_004003433.1| PREDICTED: poly(rC)-binding protein 3 isoform 2 [Ovis aries]
Length = 319
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 66/260 (25%), Positives = 107/260 (41%), Gaps = 41/260 (15%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMRH 109
+ +LL H +VGS+IGK G V+ + E+GA I I++ + ERIV I+
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE--GNCPERIVTITG-------- 63
Query: 110 SPAQDAVMRVHSRIA---------EIGFEPGQA---VVARLLVHSQQIGCLLGRGGHIVS 157
DA+ + + IA + P + V RL+V + Q G L+G+GG +
Sbjct: 64 --PTDAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIK 121
Query: 158 EMRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKRPG 217
E+R +TGA ++V D P + + V + G ++ + I + E+
Sbjct: 122 EIRESTGAQVQV-AGDMLP---NSTERAVTISGTPDAIIQCVKQICVVMLES-------- 169
Query: 218 PNNGHS-YLPPFPEMPPPPFRPRHNPASPGSYPSP---VGPFHSMDRGMGPSQPFDHQA- 272
P G + + P P P F G Y P + H + P P
Sbjct: 170 PRKGVTVVVAPKPASTPVIFAGGQAYTIQGQYAIPHPDLTKLHQLAMQQTPFPPLGQTNP 229
Query: 273 AFSHGMDPMVPPNSDRIPFP 292
AF G+D P ++ + P
Sbjct: 230 AFPAGLDASPPASTHELTIP 249
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 78/341 (22%), Positives = 130/341 (38%), Gaps = 63/341 (18%)
Query: 119 VHSRIAEIGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAPRC 178
+ S+++E G + RLL+H +++G ++G+ G V +MR +GA I +
Sbjct: 1 MESKVSEGGLNV--TLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE------- 51
Query: 179 GSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKRPGPNNGHSYLPPFPEMPPPPFRP 238
G+ + IV + G ++ A I + E I N S P + PP R
Sbjct: 52 GNCPERIVTITGPTDAIFKAFAMIAYKFEEDII--------NSMSNSPATSK-PPVTLRL 102
Query: 239 RHNPASPGSYPSPVGPFHSMDRGMGPSQPFDHQAAFSHGMDPMVPPNSDRIPFPYGS--- 295
+ GS +G S + + S Q A M+P +++R G+
Sbjct: 103 VVPASQCGSL---IGKGGSKIKEIRESTGAQVQVA-----GDMLPNSTERAVTISGTPDA 154
Query: 296 -------------ERPGHGPTFDRPPSPRSWTPQGVGGGDPRGFDASSGF---------- 332
E P G T P P S TP GG
Sbjct: 155 IIQCVKQICVVMLESPRKGVTVVVAPKPAS-TPVIFAGGQAYTIQGQYAIPHPDLTKLHQ 213
Query: 333 -----TP-----RNRPVESGNHAAILTSTTIEVVIPQLYMAHVYGENNSNLSHIRQISGA 382
TP + P A ++T E+ IP + + G + ++ IRQ+SGA
Sbjct: 214 LAMQQTPFPPLGQTNPAFPAGLDASPPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGA 273
Query: 383 NVVVNDPKPGATEGVVMVSGTSDQMRAAQSLIHAFILCGVT 423
+ + + G++E + ++GT + AQ LI+A + VT
Sbjct: 274 QIKIANATEGSSERQITITGTPANISLAQYLINARLTSEVT 314
>gi|395540426|ref|XP_003772156.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein
3-B-like [Sarcophilus harrisii]
Length = 587
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 88/160 (55%), Gaps = 19/160 (11%)
Query: 61 VGSLIGKGGSIVRTFQNETGASIKIA-DILPDSEERIVVISARENSEMRHSPAQDAVMRV 119
VG++IGK G ++ GASIKIA PD++ER+V+I+ ++ + A R+
Sbjct: 423 VGAIIGKMGQHIKQLSRFAGASIKIAPPETPDAKERMVIITGPPEAQFK------AQGRI 476
Query: 120 HSRIAEIGF---EPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAP 176
+ ++ E F + + A + V S G ++G+GG V+E++ T A + V P+DQ P
Sbjct: 477 YGKLKEENFFGPKEEVKLEAHIKVPSYAAGRVIGKGGKTVNELQNLTSAEV-VVPRDQIP 535
Query: 177 RCGSPHDE-IVQVIGNYHSVQDALFHITSRLRETIFPMKR 215
+DE IV++ G++++ Q A +++E + +KR
Sbjct: 536 ---DENDEVIVKITGHFYACQLA----QRKIQEILAQVKR 568
Score = 38.5 bits (88), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 43/187 (22%), Positives = 87/187 (46%), Gaps = 11/187 (5%)
Query: 27 RGYS-SGPGHE-TVGGRNRMFYEEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIK 84
RGY GP + + GG ++ ++ ++L VG++IGK G+ +R +T + I
Sbjct: 173 RGYGHRGPQRQGSPGGAAGQNHQNDIPLRMLVPTQFVGAIIGKEGATIRNITKQTQSKID 232
Query: 85 I--ADILPDSEERIVVISARENSEMRHSPAQDAVMRVHSRIAEIGFEPGQAVVARLLVHS 142
I + SE+ I + ++ E S A +M + + A+ + + ++L H+
Sbjct: 233 IHRKENAGASEKPITIHASPEGC----STACKIIMEIMQKEAQ-DTKFTDEIPLKILAHN 287
Query: 143 QQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHI 202
+G L+G+ G + ++ + T I + P Q +P + + V G+ + A I
Sbjct: 288 NFVGRLIGKEGRNLKKIEQDTDTKITISPL-QELTLYNP-ERTITVKGSIETCGKAEEEI 345
Query: 203 TSRLRET 209
++RE+
Sbjct: 346 MKKIRES 352
>gi|4191610|gb|AAD09827.1| IGF-II mRNA-binding protein 2 [Homo sapiens]
gi|18204201|gb|AAH21290.1| Insulin-like growth factor 2 mRNA binding protein 2 [Homo sapiens]
gi|123982692|gb|ABM83087.1| insulin-like growth factor 2 mRNA binding protein 2 [synthetic
construct]
gi|157928388|gb|ABW03490.1| insulin-like growth factor 2 mRNA binding protein 2 [synthetic
construct]
Length = 598
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 82/157 (52%), Gaps = 13/157 (8%)
Query: 46 YEEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADIL-PDSEERIVVISAREN 104
Y E+ + L VG++IGK G+ ++ GASIKIA PD ER+V+I+
Sbjct: 423 YPEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITGPPE 482
Query: 105 SEMRHSPAQDAVMRVHSRIAEIG-FEPGQAVV--ARLLVHSQQIGCLLGRGGHIVSEMRR 161
++ + A R+ ++ E F P + V A + V S G ++G+GG V+E++
Sbjct: 483 AQFK------AQGRIFGKLKEENFFNPKEEVKLEAHIRVPSSTAGRVIGKGGKTVNELQN 536
Query: 162 ATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDA 198
T A + + P+DQ P + IV++IG++ + Q A
Sbjct: 537 LTSAEV-IVPRDQTP--DENEEVIVRIIGHFFASQTA 570
>gi|58865460|ref|NP_001011945.1| poly(rC)-binding protein 3 [Rattus norvegicus]
gi|50927011|gb|AAH79196.1| Poly(rC) binding protein 3 [Rattus norvegicus]
Length = 319
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 67/132 (50%), Gaps = 24/132 (18%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMRH 109
+ +LL H +VGS+IGK G V+ + E+GA I I++ + ERIV I+
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE--GNCPERIVTITG-------- 63
Query: 110 SPAQDAVMRVHSRIA---------EIGFEPGQA---VVARLLVHSQQIGCLLGRGGHIVS 157
DA+ + + IA + P + V RL+V + Q G L+G+GG +
Sbjct: 64 --PTDAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIK 121
Query: 158 EMRRATGASIRV 169
E+R +TGA ++V
Sbjct: 122 EIRESTGAQVQV 133
Score = 43.9 bits (102), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 42/74 (56%)
Query: 350 STTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATEGVVMVSGTSDQMRA 409
++T E+ IP + + G + ++ IRQ+SGA + + + G++E + ++GT +
Sbjct: 241 ASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQITITGTPANISL 300
Query: 410 AQSLIHAFILCGVT 423
AQ LI+A + VT
Sbjct: 301 AQYLINARLTSEVT 314
>gi|414870925|tpg|DAA49482.1| TPA: hypothetical protein ZEAMMB73_398324 [Zea mays]
Length = 170
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 44/68 (64%)
Query: 351 TTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATEGVVMVSGTSDQMRAA 410
+TIE+ IP + + G NL+ IRQ+SGA + +++ G++E VV + GT DQ +AA
Sbjct: 81 STIELRIPNSSLGSIVGAGGVNLAEIRQVSGARLRLHEAHAGSSESVVEIQGTLDQAKAA 140
Query: 411 QSLIHAFI 418
QSL+ FI
Sbjct: 141 QSLLQGFI 148
>gi|193248243|dbj|BAC04327.2| unnamed protein product [Homo sapiens]
Length = 319
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 67/132 (50%), Gaps = 24/132 (18%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMRH 109
+ +LL H +VGS+IGK G V+ + E+GA I I++ + ERIV I+
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE--GNCPERIVTITG-------- 63
Query: 110 SPAQDAVMRVHSRIA---------EIGFEPGQA---VVARLLVHSQQIGCLLGRGGHIVS 157
DA+ + + IA + P + V RL+V + Q G L+G+GG +
Sbjct: 64 --PTDAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIK 121
Query: 158 EMRRATGASIRV 169
E+R +TGA ++V
Sbjct: 122 EIRESTGAQVQV 133
Score = 43.9 bits (102), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 42/74 (56%)
Query: 350 STTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATEGVVMVSGTSDQMRA 409
++T E+ IP + + G + ++ IRQ+SGA + + + G++E + ++GT +
Sbjct: 241 ASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQITITGTPANISL 300
Query: 410 AQSLIHAFILCGVT 423
AQ LI+A + VT
Sbjct: 301 AQYLINARLTSEVT 314
>gi|41053065|dbj|BAD08009.1| putative KH domain protein [Oryza sativa Japonica Group]
Length = 458
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 86/188 (45%), Gaps = 28/188 (14%)
Query: 51 VFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIAD----------ILPDSEERI---- 96
VF+L+ DKVG LIG+ G ++ +T A +++ + + DS + I
Sbjct: 98 VFRLVVATDKVGGLIGRRGDTIKRLCEDTRARVRVLEAAAAAAANRIVDSDSNDFIAKVT 157
Query: 97 ---VVISARENSEMRHSPAQDAVMRVHSRIAEI----------GFEPGQAVVARLLVHSQ 143
V+ISA E S+ PA DA +++ I +I G P + A+LLV S
Sbjct: 158 FEMVLISATEESQAELPPAMDAAIKIFMHINDIEKINCDDTLSGSAP-EKCSAKLLVPSA 216
Query: 144 QIGCLLGRGGHIVSEMRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHIT 203
Q L+G+ G + ++ TGA++++ K + + IV + G V AL +
Sbjct: 217 QATHLIGKQGVRIKSIQETTGATVKIIDKVELLSYDVVDERIVDIHGAPLKVLHALKSVL 276
Query: 204 SRLRETIF 211
LR+ +
Sbjct: 277 GVLRKFLV 284
>gi|225000564|gb|AAI72604.1| Neuro-oncological ventral antigen 2 [synthetic construct]
Length = 583
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 79/181 (43%), Gaps = 37/181 (20%)
Query: 52 FKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIA---DILPDSEERIVVISARENSEMR 108
K+L GS+IGKGG + Q ETGA+IK++ D P + ER+ ++
Sbjct: 126 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQG------- 178
Query: 109 HSPAQDAVMRVHSRIAE---------------------IGFEPGQAVVARLLVHSQQIGC 147
+A+ VHS IAE P +A A+L+V + G
Sbjct: 179 ---TAEALNAVHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVPNSTAGL 235
Query: 148 LLGRGGHIVSEMRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLR 207
++G+GG V + +GA +++ Q P + + +V V G V A+ I +++
Sbjct: 236 IIGKGGATVKAVMEQSGAWVQL---SQKPEGINLQERVVTVSGEPEQVHKAVSAIVQKVQ 292
Query: 208 E 208
E
Sbjct: 293 E 293
>gi|56118219|ref|NP_001007226.1| insulin-like growth factor 2 mRNA-binding protein 2 isoform b [Homo
sapiens]
gi|4883681|gb|AAD31596.1|AF057352_1 hepatocellular carcinoma autoantigen [Homo sapiens]
gi|119598615|gb|EAW78209.1| insulin-like growth factor 2 mRNA binding protein 2, isoform CRA_a
[Homo sapiens]
gi|410223072|gb|JAA08755.1| insulin-like growth factor 2 mRNA binding protein 2 [Pan
troglodytes]
gi|410251294|gb|JAA13614.1| insulin-like growth factor 2 mRNA binding protein 2 [Pan
troglodytes]
gi|410302888|gb|JAA30044.1| insulin-like growth factor 2 mRNA binding protein 2 [Pan
troglodytes]
gi|410342485|gb|JAA40189.1| insulin-like growth factor 2 mRNA binding protein 2 [Pan
troglodytes]
Length = 556
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 82/157 (52%), Gaps = 13/157 (8%)
Query: 46 YEEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADIL-PDSEERIVVISAREN 104
Y E+ + L VG++IGK G+ ++ GASIKIA PD ER+V+I+
Sbjct: 381 YPEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITGPPE 440
Query: 105 SEMRHSPAQDAVMRVHSRIAEIG-FEPGQAVV--ARLLVHSQQIGCLLGRGGHIVSEMRR 161
++ + A R+ ++ E F P + V A + V S G ++G+GG V+E++
Sbjct: 441 AQFK------AQGRIFGKLKEENFFNPKEEVKLEAHIRVPSSTAGRVIGKGGKTVNELQN 494
Query: 162 ATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDA 198
T A + + P+DQ P + IV++IG++ + Q A
Sbjct: 495 LTSAEV-IVPRDQTP--DENEEVIVRIIGHFFASQTA 528
>gi|403270472|ref|XP_003927203.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2
[Saimiri boliviensis boliviensis]
Length = 585
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 82/157 (52%), Gaps = 13/157 (8%)
Query: 46 YEEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADIL-PDSEERIVVISAREN 104
Y E+ + L VG++IGK G+ ++ GASIKIA PD ER+V+I+
Sbjct: 410 YPEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITGPPE 469
Query: 105 SEMRHSPAQDAVMRVHSRIAEIG-FEPGQAVV--ARLLVHSQQIGCLLGRGGHIVSEMRR 161
++ + A R+ ++ E F P + V A + V S G ++G+GG V+E++
Sbjct: 470 AQFK------AQGRIFGKLKEENFFNPKEEVKLEAHIRVPSSTAGRVIGKGGKTVNELQN 523
Query: 162 ATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDA 198
T A + + P+DQ P + IV++IG++ + Q A
Sbjct: 524 LTSAEV-IVPRDQTP--DENEEVIVRIIGHFFASQTA 557
>gi|414870924|tpg|DAA49481.1| TPA: hypothetical protein ZEAMMB73_398324 [Zea mays]
Length = 169
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 44/68 (64%)
Query: 351 TTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATEGVVMVSGTSDQMRAA 410
+TIE+ IP + + G NL+ IRQ+SGA + +++ G++E VV + GT DQ +AA
Sbjct: 80 STIELRIPNSSLGSIVGAGGVNLAEIRQVSGARLRLHEAHAGSSESVVEIQGTLDQAKAA 139
Query: 411 QSLIHAFI 418
QSL+ FI
Sbjct: 140 QSLLQGFI 147
>gi|281354032|gb|EFB29616.1| hypothetical protein PANDA_003725 [Ailuropoda melanoleuca]
Length = 434
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 81/155 (52%), Gaps = 13/155 (8%)
Query: 46 YEEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADIL-PDSEERIVVISAREN 104
Y E+ + L VG++IGK G+ ++ GASIKIA PD ER+V+I+
Sbjct: 289 YPEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITGPPE 348
Query: 105 SEMRHSPAQDAVMRVHSRIAEIG-FEPGQAVV--ARLLVHSQQIGCLLGRGGHIVSEMRR 161
++ + A R+ ++ E F P + V A + V S G ++G+GG V+E++
Sbjct: 349 AQFK------AQGRIFGKLKEENFFNPKEEVKLEAHIRVPSSTAGRVIGKGGKTVNELQN 402
Query: 162 ATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQ 196
T A + + P+DQ P + IV++IG++ + Q
Sbjct: 403 LTSAEV-IVPRDQTP--DENEEVIVRIIGHFFASQ 434
>gi|269784927|ref|NP_001161615.1| NOVA-like protein [Saccoglossus kowalevskii]
gi|268054231|gb|ACY92602.1| NOVA-like protein [Saccoglossus kowalevskii]
Length = 516
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 89/189 (47%), Gaps = 25/189 (13%)
Query: 33 PGHETVGGRNRMFYEEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIA---DIL 89
P +GG + Y + K+L GS+IGKGG V Q ETGA+IK++ D
Sbjct: 33 PKRTNIGGNDDNKY----ILKMLIPSAAAGSVIGKGGQTVVQLQRETGANIKLSKSNDYY 88
Query: 90 PDSEERIVVISARENS----------EMRHSPAQDAVMRVHSRIAEIGFEPGQAVVARLL 139
P + ER+V+I+ S ++R SP A S +++ E + V +++
Sbjct: 89 PGTSERVVLITGTVESLTAVGNFVIEKVRDSPQLAAKTGNESAVSQ---ERARQV--KII 143
Query: 140 VHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDAL 199
+ + G ++G+GG + TG+ +++ K + + ++ + G + + A+
Sbjct: 144 IPNSTAGLIIGKGGATIKAFMEQTGSKLQISQKSEGVNL---SERVLTISGEGDANKKAM 200
Query: 200 FHITSRLRE 208
+ S+++E
Sbjct: 201 NAVISKVQE 209
>gi|224145055|ref|XP_002325510.1| predicted protein [Populus trichocarpa]
gi|222862385|gb|EEE99891.1| predicted protein [Populus trichocarpa]
Length = 581
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 80/168 (47%), Gaps = 14/168 (8%)
Query: 58 LDKVGSLIGKGGSIVRTFQNETGASIKIA-DILPDSE------ERIVVISARENSE-MRH 109
L +VG LIGKGG +R Q +GA I+I D DS+ E I +S+ N+E + +
Sbjct: 2 LGQVGVLIGKGGDTIRYLQYNSGAKIQITRDSEADSQSTTRPVELIGTLSSIRNAEKLIN 61
Query: 110 SPAQDAVMRVHSRIAEIGFEPGQAVVA-----RLLVHSQQIGCLLGRGGHIVSEMRRATG 164
+ +A + +G G + V ++++G ++GRGG + ++ +G
Sbjct: 62 AVIAEADAGGSPSLVAMGLASGAQTAGVGDQLEIPVPNEKVGLIIGRGGETIKGLQAKSG 121
Query: 165 ASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFP 212
A I++ P+ P + V+V G+ V+ A I + +T+ P
Sbjct: 122 ARIQLIPQ-HLPEGDGSKERTVRVTGDKRQVEMAREMIMDVMNQTVRP 168
>gi|449493846|ref|XP_002188887.2| PREDICTED: poly(rC)-binding protein 3-like [Taeniopygia guttata]
Length = 352
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/133 (33%), Positives = 66/133 (49%), Gaps = 26/133 (19%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMRH 109
+ +LL H +VGS+IGK G V+ + E+GA I I++ ERIV I+
Sbjct: 17 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE--GTCPERIVTITG-------- 66
Query: 110 SPAQDAVMRVHSRIAEIGFEPGQA-------------VVARLLVHSQQIGCLLGRGGHIV 156
DA+ + S IA + FE V RL+V + Q G L+G+GG +
Sbjct: 67 --PTDAIFKAFSMIA-LKFEEDINASMTNSSVTSKPPVTLRLVVPASQCGSLIGKGGSKI 123
Query: 157 SEMRRATGASIRV 169
E+R +TGA ++V
Sbjct: 124 KEIRESTGAQVQV 136
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 44/81 (54%), Gaps = 11/81 (13%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIA-DILPDSEERIVVISARENSEMR 108
V +L+ + GSLIGKGGS ++ + TGA +++A D+LP+S ER V IS
Sbjct: 101 VTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNSTERAVTISG------- 153
Query: 109 HSPAQDAVMRVHSRIAEIGFE 129
DA+++ +I + E
Sbjct: 154 ---TPDAIIQCVKQICVVMLE 171
Score = 42.0 bits (97), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 36/65 (55%)
Query: 354 EVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATEGVVMVSGTSDQMRAAQSL 413
E+ IP + + G S ++ IRQ+SGA + + + G+ E V ++G+ + AQ L
Sbjct: 270 ELTIPNDLIGCIIGRQGSKINEIRQMSGAQIKIANATEGSAERQVTITGSPANISLAQYL 329
Query: 414 IHAFI 418
I+A I
Sbjct: 330 INASI 334
>gi|255569106|ref|XP_002525522.1| nucleic acid binding protein, putative [Ricinus communis]
gi|223535201|gb|EEF36880.1| nucleic acid binding protein, putative [Ricinus communis]
Length = 798
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 90/200 (45%), Gaps = 28/200 (14%)
Query: 53 KLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIA---DILPDSEERIVVISARENSEMRH 109
K+ DKVG LIGKGG +R Q +GA I+I D P S R V + +S +
Sbjct: 203 KMEVPNDKVGVLIGKGGDTIRYLQYNSGAKIQITRDMDADPHSTTRPVELIGTLSSISK- 261
Query: 110 SPAQDAVMRVHSRIAEIGFEPGQAVVARLL---------------VHSQQIGCLLGRGGH 154
A +++ IAE ++VAR L V ++++G ++GRGG
Sbjct: 262 -----AEKLINAVIAEADAGGSPSLVARGLPSAQTAGVGDQIEMQVPNEKVGLIIGRGGD 316
Query: 155 IVSEMRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETI--FP 212
+ ++ +GA I++ P+ P + + V+V G+ ++ A I + + + P
Sbjct: 317 TIKALQAKSGARIQLIPQ-HPPEGDASKERTVRVTGDRKQIEIAREMIKDVMSQNVRLSP 375
Query: 213 MKRPGPNNGHSYLPPFPEMP 232
+ G N SY P P P
Sbjct: 376 LSG-GYNQQQSYRPRGPTGP 394
>gi|395839827|ref|XP_003792777.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2
isoform 2 [Otolemur garnettii]
Length = 554
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 82/157 (52%), Gaps = 13/157 (8%)
Query: 46 YEEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADIL-PDSEERIVVISAREN 104
Y E+ + L VG++IGK G+ ++ GASIKIA PD ER+V+I+
Sbjct: 379 YPEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITGPPE 438
Query: 105 SEMRHSPAQDAVMRVHSRIAEIG-FEPGQAVV--ARLLVHSQQIGCLLGRGGHIVSEMRR 161
++ + A R+ ++ E F P + V A + V S G ++G+GG V+E++
Sbjct: 439 AQFK------AQGRIFGKLKEENFFNPKEEVKLEAHIRVPSSTAGRVIGKGGKTVNELQN 492
Query: 162 ATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDA 198
T A + + P+DQ P + IV++IG++ + Q A
Sbjct: 493 LTSAEV-IVPRDQTP--DENEEVIVRIIGHFFASQTA 526
>gi|410982764|ref|XP_003997718.1| PREDICTED: RNA-binding protein Nova-2 [Felis catus]
Length = 372
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 83/191 (43%), Gaps = 37/191 (19%)
Query: 42 NRMFYEEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIA---DILPDSEERIVV 98
+R E E K+L GS+IGKGG + Q ETGA+IK++ D P + ER+ +
Sbjct: 33 DRDGEEGEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCL 92
Query: 99 ISARENSEMRHSPAQDAVMRVHSRIAE---------------------IGFEPGQAVVAR 137
+ +A+ VHS IAE P +A A+
Sbjct: 93 VQG----------TAEALNAVHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQAK 142
Query: 138 LLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQD 197
L+V + G ++G+GG V + +GA +++ Q P + + +V V G V
Sbjct: 143 LIVPNSTAGLIIGKGGATVKAVMEQSGAWVQL---SQKPEGINLQERVVTVSGEPEQVHK 199
Query: 198 ALFHITSRLRE 208
A+ I +++E
Sbjct: 200 AVSAIVQKVQE 210
>gi|70949112|ref|XP_743997.1| hypothetical protein [Plasmodium chabaudi chabaudi]
gi|56523758|emb|CAH77309.1| hypothetical protein PC000132.02.0 [Plasmodium chabaudi chabaudi]
Length = 234
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/165 (22%), Positives = 82/165 (49%), Gaps = 18/165 (10%)
Query: 53 KLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIA---DILPDSEERIVVISARENSEMRH 109
K+L + GS+IGK GSI+ +N+TG S+K++ P++++R++VI ++
Sbjct: 22 KMLINNLVAGSIIGKNGSIISGIENKTGCSLKLSPNNSYFPNTQKRVLVICGKQEEINNV 81
Query: 110 SPAQDAVMR-------VHSRIAEIGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRA 162
+R +H E Q R++V + ++G+GGH + +++
Sbjct: 82 IIIILDKIRQISIPNNMHVNKNE---NKTQTYTCRVVVPKSAVSAIIGKGGHQIKQLQNN 138
Query: 163 TGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLR 207
TG I++ ++ ++ I+ ++G++ SV+D + + ++
Sbjct: 139 TGTKIQISNREDG-----LNERIISIVGSFDSVRDTTTKVIASIQ 178
>gi|384248088|gb|EIE21573.1| hypothetical protein COCSUDRAFT_17393 [Coccomyxa subellipsoidea
C-169]
Length = 311
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 88/172 (51%), Gaps = 20/172 (11%)
Query: 47 EEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKI---ADILPDSEERIVVISARE 103
E++V+ K L GS+IGKGG+ + Q+++GA +++ ++ P ++ER+++ S
Sbjct: 39 EQKVIAKFLMSNAAAGSIIGKGGANISELQSQSGARLQLSRASEFFPGTQERVMLASGSV 98
Query: 104 NSEMRHSPAQDAVMRVHSRIAEIGFE------PGQAVVARLLVHSQQIGCLLGRGGHIVS 157
N + +H + +I E G++ RLLV + G ++G+GG +
Sbjct: 99 N---------QVLTALHLILTKIQGEQSMMARDGKSTQLRLLVPTPLCGAIIGKGGATIR 149
Query: 158 EMRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRET 209
+ A+I V P+D+ P G P D +V++ G + A+ + ++L E+
Sbjct: 150 SFAEDSRAAITVSPQDKQP-LGIP-DRVVRITGAQDQLLRAVALLLTKLVES 199
>gi|197101075|ref|NP_001125573.1| insulin-like growth factor 2 mRNA-binding protein 2 [Pongo abelii]
gi|75041981|sp|Q5RB68.1|IF2B2_PONAB RecName: Full=Insulin-like growth factor 2 mRNA-binding protein 2;
Short=IGF2 mRNA-binding protein 2; Short=IMP-2; AltName:
Full=IGF-II mRNA-binding protein 2; AltName: Full=VICKZ
family member 2
gi|55728499|emb|CAH90992.1| hypothetical protein [Pongo abelii]
Length = 556
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 82/157 (52%), Gaps = 13/157 (8%)
Query: 46 YEEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADIL-PDSEERIVVISAREN 104
Y E+ + L VG++IGK G+ ++ GASIKIA PD ER+V+I+
Sbjct: 381 YPEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITGPPE 440
Query: 105 SEMRHSPAQDAVMRVHSRIAEIG-FEPGQAVV--ARLLVHSQQIGCLLGRGGHIVSEMRR 161
++ + A R+ ++ E F P + V A + V S G ++G+GG V+E++
Sbjct: 441 AQFK------AQGRIFGKLKEENFFNPKEEVKLEAHIRVPSSTAGRVIGKGGKTVNELQN 494
Query: 162 ATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDA 198
T A + + P+DQ P + IV++IG++ + Q A
Sbjct: 495 LTSAEV-IVPRDQTP--DENEEVIVRIIGHFFASQTA 528
>gi|432110248|gb|ELK34019.1| Poly(rC)-binding protein 3 [Myotis davidii]
Length = 347
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 67/123 (54%), Gaps = 6/123 (4%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMRH 109
+ +LL H +VGS+IGK G V+ + E+GA I I++ + ERIV I+ ++ +
Sbjct: 56 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE--GNCPERIVTITGPTDAIFK- 112
Query: 110 SPAQDAVMRVHSRIAEIGFEPGQA---VVARLLVHSQQIGCLLGRGGHIVSEMRRATGAS 166
+ A A I + P + V RL+V + Q G L+G+GG + E+R +TGA
Sbjct: 113 AFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQ 172
Query: 167 IRV 169
++V
Sbjct: 173 VQV 175
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 81/331 (24%), Positives = 132/331 (39%), Gaps = 55/331 (16%)
Query: 118 RVHSRIAEIGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAPR 177
++ S+++E G + RLL+H +++G ++G+ G V +MR +GA I +
Sbjct: 42 KMESKVSEGGLN--VTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE------ 93
Query: 178 CGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKRPGPNNGHSYLPPFPEMPPPPFR 237
G+ + IV + G ++ A I + E I N S P + PP R
Sbjct: 94 -GNCPERIVTITGPTDAIFKAFAMIAYKFEEDII--------NSMSNSPATSK-PPVTLR 143
Query: 238 PRHNPASPGSYPSPVGPFHSMDRGMGPSQPFDHQAAFSHGMDPMVPPNSDRIPFPYGS-- 295
+ GS +G S + + S Q A M+P +++R G+
Sbjct: 144 LVVPASQCGSL---IGKGGSKIKEIRESTGAQVQVA-----GDMLPNSTERAVTISGTPD 195
Query: 296 --------------ERPGHGPTFDRPPSPRSWTPQGVGGGDPRGF---------DASSGF 332
E P G T P P S TP GG D S F
Sbjct: 196 AIIQCVKQICVVMLESPPKGATIPYRPKPAS-TPVIFAGGQAYTIQGQYAIPHPDVSFHF 254
Query: 333 TPRNRPVESGNHAAILTSTTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPG 392
P S A+ ST E+ IP + + G + ++ IRQ+SGA + + + G
Sbjct: 255 V--CLPFSSCLDASPPASTH-ELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEG 311
Query: 393 ATEGVVMVSGTSDQMRAAQSLIHAFILCGVT 423
++E + ++GT + AQ LI+A + VT
Sbjct: 312 SSERQITITGTPANISLAQYLINARLTSEVT 342
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 91/210 (43%), Gaps = 51/210 (24%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIA-DILPDSEERIVVISARENS--- 105
V +L+ + GSLIGKGGS ++ + TGA +++A D+LP+S ER V IS ++
Sbjct: 140 VTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNSTERAVTISGTPDAIIQ 199
Query: 106 -------EMRHSPAQDAVMRVHSRIAE--IGFEPGQAVVAR------------------- 137
M SP + A + + A + F GQA +
Sbjct: 200 CVKQICVVMLESPPKGATIPYRPKPASTPVIFAGGQAYTIQGQYAIPHPDVSFHFVCLPF 259
Query: 138 --------------LLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAPRCGSPHD 183
L + + IGC++GR G ++E+R+ +GA I++ + GS
Sbjct: 260 SSCLDASPPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATE----GSSER 315
Query: 184 EIVQVIGNYHSVQDALFHITSRLRETIFPM 213
+I + G ++ A + I +RL + M
Sbjct: 316 QIT-ITGTPANISLAQYLINARLTSEVTGM 344
>gi|449265657|gb|EMC76819.1| Poly(rC)-binding protein 3 [Columba livia]
Length = 343
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/133 (33%), Positives = 66/133 (49%), Gaps = 26/133 (19%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMRH 109
+ +LL H +VGS+IGK G V+ + E+GA I I++ ERIV I+
Sbjct: 17 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE--GSCPERIVTITG-------- 66
Query: 110 SPAQDAVMRVHSRIAEIGFEPGQA-------------VVARLLVHSQQIGCLLGRGGHIV 156
DA+ + S IA + FE V RL+V + Q G L+G+GG +
Sbjct: 67 --PTDAIFKAFSMIA-LKFEEDINASMTNSTVTSKPPVTLRLVVPASQCGSLIGKGGSKI 123
Query: 157 SEMRRATGASIRV 169
E+R +TGA ++V
Sbjct: 124 KEIRESTGAQVQV 136
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 46/81 (56%), Gaps = 11/81 (13%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIA-DILPDSEERIVVISARENSEMR 108
V +L+ + GSLIGKGGS ++ + TGA +++A D+LP+S ER V IS
Sbjct: 101 VTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNSTERAVTISG------- 153
Query: 109 HSPAQDAVMRVHSRIAEIGFE 129
+P DA+++ +I + E
Sbjct: 154 -TP--DAIIQCVKQICVVMLE 171
Score = 41.6 bits (96), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 35/63 (55%)
Query: 354 EVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATEGVVMVSGTSDQMRAAQSL 413
E+ IP + + G S ++ IRQ+SGA + + + G+ E V ++G+ + AQ L
Sbjct: 280 ELTIPNDLIGCIIGRQGSKINEIRQMSGAQIKIANATEGSAERQVTITGSPANISLAQYL 339
Query: 414 IHA 416
I+A
Sbjct: 340 INA 342
>gi|195029383|ref|XP_001987553.1| GH21981 [Drosophila grimshawi]
gi|193903553|gb|EDW02420.1| GH21981 [Drosophila grimshawi]
Length = 512
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 84/186 (45%), Gaps = 24/186 (12%)
Query: 41 RNRMFYEEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVIS 100
RNR E + ++L G++IGKGG ++ + + A++ + D ER + IS
Sbjct: 16 RNR---RNEDMVRILIPSSIAGAVIGKGGQHIQKMRTQYKATVSVDD--SQGPERTIQIS 70
Query: 101 ARENSEMRHSPAQDAVMRVHSRIAEIGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSEMR 160
A D+ + + + + + E RLL+H GC++G+GG + E+R
Sbjct: 71 A----------DIDSTLEIITEMLKYFEERDDEFDVRLLIHQSLAGCVIGKGGQKIKEIR 120
Query: 161 RATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKRPGPNN 220
G + AP+ D +VQ +G V DA+ + + R+T P+K P
Sbjct: 121 DRIGCRFLKVFSNVAPQS---TDRVVQTVGKQTQVIDAVREVITLTRDT--PIKGP---- 171
Query: 221 GHSYLP 226
H+Y P
Sbjct: 172 IHNYDP 177
>gi|70933846|ref|XP_738237.1| hypothetical protein [Plasmodium chabaudi chabaudi]
gi|56514288|emb|CAH87175.1| conserved hypothetical protein [Plasmodium chabaudi chabaudi]
Length = 262
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/165 (23%), Positives = 82/165 (49%), Gaps = 18/165 (10%)
Query: 53 KLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIA---DILPDSEERIVVISARENSEMRH 109
K+L + GS+IGK GSI+ +N+TG S+K++ P++++R++VI ++
Sbjct: 22 KMLINNLVAGSIIGKNGSIISGIENKTGCSLKLSPNNSYFPNTQKRVLVICGKQEEINNV 81
Query: 110 SPAQDAVMR-------VHSRIAEIGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRA 162
+R +H E Q R++V + ++G+GGH + +++
Sbjct: 82 IIIILDKIRQISIPNNMHVNKNE---NKTQTYTCRVVVPKSAVSAIIGKGGHQIKQLQNN 138
Query: 163 TGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLR 207
TG I++ + R ++ I+ ++G++ SV+D + + ++
Sbjct: 139 TGTKIQI-----SNREDGLNERIISIVGSFDSVRDTTTKVIASIQ 178
>gi|358255903|dbj|GAA57520.1| heterogeneous nuclear ribonucleoprotein K, partial [Clonorchis
sinensis]
Length = 1085
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 74/149 (49%), Gaps = 22/149 (14%)
Query: 62 GSLIGKGGSIVRTFQNETGASIKIADILPDSE--ERIVVISARENSEMRHSPAQDAVMRV 119
G +IGKGG ++ + E S+K+ ++PDS ER++V+ S V+ +
Sbjct: 3 GVIIGKGGENIQRIREE--YSVKV--MIPDSNGPERVLVLDGDLGS----------VLEI 48
Query: 120 H-SRIAEIGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATG-ASIRVFPKDQAPR 177
+ + + V RLLVH Q GC++GRGG+ + E+R +G +++V+
Sbjct: 49 FVENLERMQNNRDEGVDLRLLVHQSQAGCIIGRGGYKIKELREQSGLQTLKVYQM----L 104
Query: 178 CGSPHDEIVQVIGNYHSVQDALFHITSRL 206
C D ++Q++G+ V D L I L
Sbjct: 105 CPGSTDRVIQLVGDLDKVVDCLQAIAELL 133
Score = 40.4 bits (93), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 19/76 (25%), Positives = 43/76 (56%), Gaps = 1/76 (1%)
Query: 350 STTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATEGVVMVSGTSDQMRA 409
+TT +V + + + G ++ +RQ S A++ ++ +PG + ++ ++GT +Q++
Sbjct: 278 TTTTQVSVSNKMIGAIMGRAGVRINQVRQESNADIKISRQEPGVEDRIITITGTPEQIQN 337
Query: 410 AQSLIHAF-ILCGVTS 424
AQ L+ + IL +S
Sbjct: 338 AQFLLQMWKILVSCSS 353
>gi|358252903|dbj|GAA50475.1| poly(rC)-binding protein 2/3/4 [Clonorchis sinensis]
Length = 859
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 91/207 (43%), Gaps = 33/207 (15%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMRH 109
++ +LL +VGS+IGK G V+ ++ E+GA I I+D S ERIV I+
Sbjct: 200 LIVRLLMSGKEVGSIIGKRGENVKKYREESGARINISD--GSSPERIVTITGT------- 250
Query: 110 SPAQDAVMRVHSRIAEIGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRV 169
+ + S+ E F G LL + Q G ++G+GG + E+R TGASI+V
Sbjct: 251 TEQISVAFTLMSQKFEDDFTQG------LLRMATQCGSIIGKGGSRIKEVRELTGASIQV 304
Query: 170 FPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKRPGPNNGHSYLPPFP 229
+ P + + V + G ++ + H+ ++ P G P P
Sbjct: 305 -ASEALP---ASTERTVTISGAAKAISKCVRHLCDIFVDS--------PAKG----PVIP 348
Query: 230 EMPPPPFRPRHNPASPGSYPSPVGPFH 256
P P F N PGS P P G H
Sbjct: 349 YRPKPAFT-SQNMTCPGS-PFPTGLIH 373
Score = 46.2 bits (108), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 36/56 (64%), Gaps = 1/56 (1%)
Query: 46 YEEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIA-DILPDSEERIVVIS 100
+E++ LL + GS+IGKGGS ++ + TGASI++A + LP S ER V IS
Sbjct: 265 FEDDFTQGLLRMATQCGSIIGKGGSRIKEVRELTGASIQVASEALPASTERTVTIS 320
>gi|195440454|ref|XP_002068057.1| GK10610 [Drosophila willistoni]
gi|194164142|gb|EDW79043.1| GK10610 [Drosophila willistoni]
Length = 363
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 78/161 (48%), Gaps = 7/161 (4%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMR- 108
+ +L+ +VGS+IGK G IV F+ E+GA I I+D ERIV +S ++
Sbjct: 24 LTIRLIMQGKEVGSIIGKKGEIVNRFREESGAKINISD--GSCPERIVTVSGTTSAIFSA 81
Query: 109 HSPAQDAVMRVHSRIAEIGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIR 168
+ S+ ++G + RL+V + Q G L+G+ G + E+R+ TG SI+
Sbjct: 82 FTLITKKFEEWCSQFNDVGKVGKTQIPIRLIVPASQCGSLIGKSGSKIKEIRQTTGCSIQ 141
Query: 169 VFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRET 209
V + P + + V + G+ + ++ I + E+
Sbjct: 142 V-ASEMLP---NSTERAVTLSGSAEQITQCIYQICLVMLES 178
Score = 44.7 bits (104), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 51/99 (51%), Gaps = 8/99 (8%)
Query: 137 RLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQ 196
+ V + IGC++G+GG ++E+R+ +GA IR+ ++ R G D + + GN SV
Sbjct: 270 EMTVSNDLIGCIIGKGGTKIAEIRQISGAMIRISNCEE--REGGNTDRTITISGNPDSVA 327
Query: 197 DALFHITSRLRETIFPMKRPG-PNNGHSYLPPFPEMPPP 234
A + I R+ M+ G P G+ Y+ P + P
Sbjct: 328 LAQYLINMRI-----SMETAGLPIPGYHYIAPSAIVKTP 361
Score = 42.4 bits (98), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Query: 47 EEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIA-DILPDSEERIVVIS 100
+ ++ +L+ + GSLIGK GS ++ + TG SI++A ++LP+S ER V +S
Sbjct: 104 KTQIPIRLIVPASQCGSLIGKSGSKIKEIRQTTGCSIQVASEMLPNSTERAVTLS 158
Score = 40.0 bits (92), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 39/80 (48%), Gaps = 7/80 (8%)
Query: 129 EPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAPRCGSPHDEIVQV 188
+P + RL++ +++G ++G+ G IV+ R +GA I + GS + IV V
Sbjct: 19 DPSVTLTIRLIMQGKEVGSIIGKKGEIVNRFREESGAKINISD-------GSCPERIVTV 71
Query: 189 IGNYHSVQDALFHITSRLRE 208
G ++ A IT + E
Sbjct: 72 SGTTSAIFSAFTLITKKFEE 91
>gi|355746831|gb|EHH51445.1| hypothetical protein EGM_10814, partial [Macaca fascicularis]
Length = 542
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 82/157 (52%), Gaps = 13/157 (8%)
Query: 46 YEEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADIL-PDSEERIVVISAREN 104
Y E+ V L VG++IGK G+ ++ GASIKIA PD +R+V+I+
Sbjct: 367 YPEQEVVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSKRMVIITGPPE 426
Query: 105 SEMRHSPAQDAVMRVHSRIAEIG-FEPGQAVV--ARLLVHSQQIGCLLGRGGHIVSEMRR 161
++ + A R+ ++ E F P + V A + V S G ++G+GG V+E++
Sbjct: 427 AQFK------AQGRIFGKLKEENFFNPKEEVKLEAHIRVPSSTAGRVIGKGGKTVNELQN 480
Query: 162 ATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDA 198
T A + + P+DQ P + IV++IG++ + Q A
Sbjct: 481 LTSAEV-IVPRDQTP--DENEEVIVRIIGHFFASQTA 514
>gi|328787572|ref|XP_393878.3| PREDICTED: IGF-II mRNA-binding protein [Apis mellifera]
gi|380027404|ref|XP_003697415.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1-like
[Apis florea]
Length = 626
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/150 (32%), Positives = 75/150 (50%), Gaps = 15/150 (10%)
Query: 61 VGSLIGKGGSIVRTFQNETGASIKIADILPDS-----EERIVVISARENSEMRHSPAQDA 115
VG++IG GS +R +GAS+KIA I D +R V I S+ + A
Sbjct: 416 VGAIIGSKGSHIRNIIRFSGASVKIAPIEQDKPVDQQNDRKVTIVGSPESQWK------A 469
Query: 116 VMRVHSRIAEIGFEPGQA---VVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPK 172
+ ++ E GF G + +LV S Q+G ++G+GG V E++R TG+ I+ +
Sbjct: 470 QYLIFEKMREEGFVAGTEDVRLTIEILVPSTQVGRIIGKGGQNVRELQRVTGSIIK-LSE 528
Query: 173 DQAPRCGSPHDEIVQVIGNYHSVQDALFHI 202
Q+ + + VQ+IG + SVQ A I
Sbjct: 529 QQSTSPSADEEATVQIIGPFFSVQSAQRRI 558
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 85/415 (20%), Positives = 158/415 (38%), Gaps = 87/415 (20%)
Query: 52 FKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKI--ADILPDSEERIVVISARENSEMRH 109
++L + VG++IG+ GS +R T A + + D L +E+ I + EN
Sbjct: 189 LRILVQSEMVGAIIGRQGSTIRQITQMTRARVDVHRKDSLGAAEKAITIYGNPENC---- 244
Query: 110 SPAQDAVMRVHSRIAEIGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRV 169
+ A +M V + A G G+ + R+L H+ IG ++G+GG + ++ + T I V
Sbjct: 245 TNACKKIMEVTQQEA-YGLSKGE-ISLRILAHNNLIGRIIGKGGTTIKKIMQDTDTKITV 302
Query: 170 FPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKRPGPNNGHSYLPPFP 229
+ + I+ V G+ ++ A I+++LR+ SY
Sbjct: 303 SSINDINNFN--LERIITVKGSIDNMSKAESMISNKLRQ--------------SYENDLQ 346
Query: 230 EMPP-----PPFRPRHNPASPGSYPSPVGPFHSMDRGMGPSQPFDHQAAFSHGMDPMVPP 284
M P P P ++ G S GP G GP+ P+ +QA+ P
Sbjct: 347 AMAPQSLMFPGLHPMAMMSTAGMGYSSRGPGL---YGSGPA-PYPYQASL---------P 393
Query: 285 NSDRIPFPYGSERPGHGPTFDRPPSPRSWTPQGVGGGDPRGFDASSGFTPR------NRP 338
IP E F P+ G G R SG + + ++P
Sbjct: 394 TQQGIPIGDTQE-----TAFLYIPNTSVGAIIGSKGSHIRNIIRFSGASVKIAPIEQDKP 448
Query: 339 VESGNHAAIL------------------------------TSTTIEVVIPQLYMAHVYGE 368
V+ N + TIE+++P + + G+
Sbjct: 449 VDQQNDRKVTIVGSPESQWKAQYLIFEKMREEGFVAGTEDVRLTIEILVPSTQVGRIIGK 508
Query: 369 NNSNLSHIRQISGANVVVNDPKPGA----TEGVVMVSGTSDQMRAAQSLIHAFIL 419
N+ +++++G+ + +++ + + E V + G +++AQ I A +L
Sbjct: 509 GGQNVRELQRVTGSIIKLSEQQSTSPSADEEATVQIIGPFFSVQSAQRRIRAMVL 563
>gi|332215035|ref|XP_003256642.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2
isoform 5 [Nomascus leucogenys]
Length = 577
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 82/157 (52%), Gaps = 13/157 (8%)
Query: 46 YEEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADIL-PDSEERIVVISAREN 104
Y E+ + L VG++IGK G+ ++ GASIKIA PD ER+V+I+
Sbjct: 402 YPEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITGPPE 461
Query: 105 SEMRHSPAQDAVMRVHSRIAEIG-FEPGQAVV--ARLLVHSQQIGCLLGRGGHIVSEMRR 161
++ + A R+ ++ E F P + V A + V S G ++G+GG V+E++
Sbjct: 462 AQFK------AQGRIFGKLKEENFFNPKEEVKLEAHIRVPSSTAGRVIGKGGKTVNELQN 515
Query: 162 ATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDA 198
T A + + P+DQ P + IV++IG++ + Q A
Sbjct: 516 LTSAEV-IVPRDQTP--DENEEVIVRIIGHFFASQTA 549
>gi|291358560|gb|ADD96765.1| heterogeneous nuclear ribonuclear protein K [Capra hircus]
Length = 441
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 94/432 (21%), Positives = 154/432 (35%), Gaps = 104/432 (24%)
Query: 47 EEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIAD------------------- 87
+E V ++L G++IGKGG ++ + + AS+ + D
Sbjct: 40 DEMVELRILLQSKNAGAVIGKGGKNIKALRTDYNASVSVPDSSGPERILSISADIETIGE 99
Query: 88 ----ILPDSEERIVVISARENSEM-RHSPAQDAVMRVHSRIAEIGFEPGQAVVARLLVHS 142
I+P EE + + S S++ S A + + H + ++ E RLL+H
Sbjct: 100 ILKKIIPTLEEGLQLPSPTATSQLPLESDAVECLNYQHYKGSDFDCE------LRLLIHQ 153
Query: 143 QQIGCLLGRGGHIVSEMRRATGASIRVFPK------DQAPRCGSPHDEIVQVI------- 189
G ++G G + E+R T +I++F + D+ G D +V+ I
Sbjct: 154 SLAGGIIGVKGAKIKELRENTQTTIKLFQECCPQSTDRVVLIGGKPDRVVECIKIILDLI 213
Query: 190 --------------GNYHSVQD----ALFHITSRLRETIFPMKRPGPNNGHSYLPP-FPE 230
Y D + R R FPM+ G G +PP
Sbjct: 214 SESPIKGRAQPYDPNFYDETYDYGGFTMMFDDRRGRPVGFPMRGRG---GFDRMPPGRGG 270
Query: 231 MPPPPFRPRHNPAS---PGSYPSPVGPFHSMDRGMGPSQPFDHQAAFSHGMDPMVPPNSD 287
P PP R ++ S P G + DR P +D FS D D
Sbjct: 271 RPMPPSRRDYDDMSPRRGPPPPPRGGDLMAYDRRGRPGDRYDGMVGFS--ADETWDSAID 328
Query: 288 RIPFPYGSERPGHGPTFDRPPSPRSWT----PQGVGGGDPRGFDASSGFTPRNRPVESGN 343
SP W PQG G D + P+
Sbjct: 329 TW-------------------SPSEWQMAYEPQGGSGYDYSYAGGRGSYGDLGGPI---- 365
Query: 344 HAAILTSTTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATEGVVMVSGT 403
I T T IP+ + G+ + IR SGA++ +++P G+ + ++ ++GT
Sbjct: 366 ---ITTQVT----IPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGT 418
Query: 404 SDQMRAAQSLIH 415
DQ++ AQ L+
Sbjct: 419 QDQIQNAQYLLQ 430
>gi|345320820|ref|XP_001521752.2| PREDICTED: poly(rC)-binding protein 3-like [Ornithorhynchus
anatinus]
Length = 261
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 66/133 (49%), Gaps = 26/133 (19%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMRH 109
+ +LL H +VGS+IGK G V+ + E+GA I I++ + ERIV I+
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE--GNCPERIVTITG-------- 63
Query: 110 SPAQDAVMRVHSRIAEIGFEPGQA-------------VVARLLVHSQQIGCLLGRGGHIV 156
DA+ + + IA FE V RL+V + Q G L+G+GG +
Sbjct: 64 --PTDAIFKAFAMIA-YKFEEDIINSMSNSTATSKPPVTLRLVVPASQCGSLIGKGGSKI 120
Query: 157 SEMRRATGASIRV 169
E+R +TGA ++V
Sbjct: 121 KEIRESTGAQVQV 133
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 44/81 (54%), Gaps = 11/81 (13%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIA-DILPDSEERIVVISARENSEMR 108
V +L+ + GSLIGKGGS ++ + TGA +++A D+LP+S ER V IS
Sbjct: 98 VTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNSTERAVTISG------- 150
Query: 109 HSPAQDAVMRVHSRIAEIGFE 129
DA+++ +I + E
Sbjct: 151 ---TPDAIIQCVKQICVVMLE 168
>gi|354484184|ref|XP_003504270.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2-like
isoform 1 [Cricetulus griseus]
gi|344239809|gb|EGV95912.1| Insulin-like growth factor 2 mRNA-binding protein 2 [Cricetulus
griseus]
Length = 530
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 82/157 (52%), Gaps = 13/157 (8%)
Query: 46 YEEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADIL-PDSEERIVVISAREN 104
Y E+ L VG++IGK G+ ++ GASIKIA PD ER+V+I+
Sbjct: 355 YPEQETVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITGPPE 414
Query: 105 SEMRHSPAQDAVMRVHSRIAEIG-FEPGQAVV--ARLLVHSQQIGCLLGRGGHIVSEMRR 161
++ + A R+ ++ E F P + V A + V S G ++G+GG V+E++
Sbjct: 415 AQFK------AQGRIFGKLKEENFFNPKEEVKLEAHIRVPSSTAGRVIGKGGKTVNELQN 468
Query: 162 ATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDA 198
T A + + P+DQ P + + IV++IG++ + Q A
Sbjct: 469 LTSAEV-IVPRDQTPDENA--EVIVRIIGHFFASQTA 502
>gi|170580792|ref|XP_001895410.1| KH domain containing protein [Brugia malayi]
gi|158597654|gb|EDP35742.1| KH domain containing protein [Brugia malayi]
Length = 439
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/259 (22%), Positives = 112/259 (43%), Gaps = 32/259 (12%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIA---DILPDSEERIVVISARENSE 106
V K+L VG+LIGKGG +R ++E+G ++++ ++ P + ERI ++ + S
Sbjct: 34 VQVKVLIPSAAVGALIGKGGETMRNLKSESGCRLQMSKNQEVYPGTNERICLVKGKIASV 93
Query: 107 MRHSPAQDAVM-RVHSRI-----AEI----GFEPGQAVVARLLVHSQQIGCLLGRGGHIV 156
++ S D ++ ++ ++ ++I G E + +L+V + G ++G+ G +
Sbjct: 94 LKVS---DVILEKIREKVDNNTPSDIFDHKGMERKNEM--KLVVPNTSAGMVIGKSGARI 148
Query: 157 SEMRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKRP 216
E+R TGA+I+V+PK + + I+ + V L R+ E +
Sbjct: 149 KEIREQTGANIQVYPKAGSQEAKVSQERIITIAAEQDEV---LMDALQRVLEKV----AA 201
Query: 217 GPNNGHSYLPPFPEMPPPPFRPRHNPASPGSYPSPVGPFHSMDR-------GMGPSQPFD 269
P + + +P + P + G + PF R G P+ +
Sbjct: 202 DPQHAMATIPDHKDDSFGPASGLLHGMGGGVQGQTIQPFDFSSRSQNAPQFGGAPTVQQN 261
Query: 270 HQAAFSHGMDPMVPPNSDR 288
H SHG + PN R
Sbjct: 262 HFGQISHGAAQVWQPNQQR 280
>gi|402594254|gb|EJW88180.1| hypothetical protein WUBG_00913 [Wuchereria bancrofti]
Length = 407
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/259 (22%), Positives = 112/259 (43%), Gaps = 32/259 (12%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIA---DILPDSEERIVVISARENSE 106
V K+L VG+LIGKGG +R ++E+G ++++ ++ P + ERI ++ + S
Sbjct: 2 VQVKVLIPSAAVGALIGKGGETMRNLKSESGCRLQMSKNQEVYPGTNERICLVKGKIASV 61
Query: 107 MRHSPAQDAVM-RVHSRI-----AEI----GFEPGQAVVARLLVHSQQIGCLLGRGGHIV 156
++ S D ++ ++ ++ ++I G E + +L+V + G ++G+ G +
Sbjct: 62 LKVS---DVILEKIREKVDNNTPSDIFDHKGMERKNEM--KLVVPNTSAGMVIGKSGARI 116
Query: 157 SEMRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKRP 216
E+R TGA+I+V+PK + + I+ + V L R+ E +
Sbjct: 117 KEIREQTGANIQVYPKAGSQEAKVSQERIITIAAEQDEV---LMDALQRVLEKV----AA 169
Query: 217 GPNNGHSYLPPFPEMPPPPFRPRHNPASPGSYPSPVGPFHSMDR-------GMGPSQPFD 269
P + + +P + P + G + PF R G P+ +
Sbjct: 170 DPQHAMATIPDHKDDSFGPASGLLHGMGGGVQGQTIQPFDFSSRSQNAPQFGGAPTVQQN 229
Query: 270 HQAAFSHGMDPMVPPNSDR 288
H SHG + PN R
Sbjct: 230 HFGQISHGAAQVWQPNQQR 248
>gi|328781397|ref|XP_392536.4| PREDICTED: heterogeneous nuclear ribonucleoprotein K [Apis
mellifera]
Length = 482
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 85/172 (49%), Gaps = 21/172 (12%)
Query: 52 FKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSE--ERIVVISARENSEMRH 109
+LL GS+IGKGG + +++ ASI I+PD ER++ IS+ + ++
Sbjct: 84 LRLLIPSKVAGSIIGKGGQNITKLRSQYKASI----IVPDCPGPERVLTISSDLPTVLQ- 138
Query: 110 SPAQDAVMRVHSRIAEIGFEPG-QAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIR 168
+ V + E G G + R+LVH Q GC++G+GG + E+R TGA I+
Sbjct: 139 -----VLNEVVPNLEENGSRHGSDEIDVRMLVHQSQAGCIIGKGGLKIKELREKTGARIK 193
Query: 169 VFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKRPGPNN 220
++ + C D ++ + G + + + + + ++ + P+K G NN
Sbjct: 194 IY----SHCCPHSTDRLISICGKPTTCIECIRELIATIKTS--PLK--GVNN 237
Score = 42.7 bits (99), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 17/68 (25%), Positives = 38/68 (55%)
Query: 351 TTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATEGVVMVSGTSDQMRAA 410
TT +V IP+ + G+ + + +R SGA + +++P G+ + ++ ++G Q++ A
Sbjct: 408 TTTQVTIPKDLAGAIIGKGGARIRKVRSDSGAGITIDEPLSGSNDRIITITGLPSQIQMA 467
Query: 411 QSLIHAFI 418
Q L+ +
Sbjct: 468 QYLLQQSV 475
>gi|126341837|ref|XP_001363414.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 3-like
[Monodelphis domestica]
Length = 586
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 83/151 (54%), Gaps = 15/151 (9%)
Query: 61 VGSLIGKGGSIVRTFQNETGASIKIA-DILPDSEERIVVISARENSEMRHSPAQDAVMRV 119
VG++IGK G ++ GASIKIA PD++ER+V+I+ ++ + A R+
Sbjct: 423 VGAIIGKMGQHIKQLSRFAGASIKIAPPETPDAKERMVIITGPPEAQFK------AQGRI 476
Query: 120 HSRIAEIGF---EPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAP 176
+ ++ E F + + A++ V S G ++G+GG V+E++ T A + V P+DQ P
Sbjct: 477 YGKLKEENFFGPKEEVKLEAQIKVPSYAAGRVIGKGGKTVNELQNLTSAEV-VVPRDQIP 535
Query: 177 RCGSPHDE-IVQVIGNYHSVQDALFHITSRL 206
+DE IV++ G++++ Q A I L
Sbjct: 536 ---DENDEVIVKITGHFYACQLAQRKIQEIL 563
Score = 38.9 bits (89), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 39/173 (22%), Positives = 81/173 (46%), Gaps = 9/173 (5%)
Query: 39 GGRNRMFYEEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKI--ADILPDSEERI 96
GG + ++ +V ++L VG++IGK G+ +R +T + I I + SE+ I
Sbjct: 187 GGASGQNHQNDVPLRMLVPTQFVGAIIGKEGATIRNITKQTQSKIDIHRKENAGASEKPI 246
Query: 97 VVISARENSEMRHSPAQDAVMRVHSRIAEIGFEPGQAVVARLLVHSQQIGCLLGRGGHIV 156
+ ++ E S A +M + + A+ + + ++L H+ +G L+G+ G +
Sbjct: 247 TIHASPEGC----STACKIIMEIMQKEAQ-DTKFTDEIPLKILAHNNFVGRLIGKEGRNL 301
Query: 157 SEMRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRET 209
++ + T I + P Q +P + + V G+ + A I ++RE+
Sbjct: 302 KKIEQDTDTKITISPL-QELTLYNP-ERTITVKGSIETCGKAEEEIMKKIRES 352
>gi|356535513|ref|XP_003536289.1| PREDICTED: RNA-binding protein Nova-1-like [Glycine max]
Length = 337
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 85/172 (49%), Gaps = 20/172 (11%)
Query: 47 EEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIA---DILPDSEERIVVISARE 103
E+ + L GS+IGKGGS + FQ+++GA I+++ + P + +RI+++S
Sbjct: 33 EKPTYIRFLVSNSAAGSVIGKGGSTITDFQSQSGARIQLSRNHEFFPGTTDRIIMVSGAI 92
Query: 104 NSEMRHSPAQDAVMRVHSR-IAEI------GFEPGQAVVARLLVHSQQIGCLLGRGGHIV 156
N Q AV + S+ ++E+ EP V RL+V + G ++G+GG +
Sbjct: 93 NE------IQRAVELILSKLLSELHSEDDNDAEPKTKV--RLVVPNGSCGGIIGKGGATI 144
Query: 157 SEMRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRE 208
+ A I++ P+D +D +V + G++ A+ I S+L E
Sbjct: 145 RSFIEDSQAGIKISPQDN--NYYGQNDRLVTLTGSFDEQMRAIELIVSKLSE 194
>gi|326925691|ref|XP_003209044.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2-like
[Meleagris gallopavo]
Length = 502
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 81/155 (52%), Gaps = 13/155 (8%)
Query: 48 EEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADIL-PDSEERIVVISARENSE 106
E+ V L VG++IGK G ++ GASIKIA PD+ ER+V+I+ ++
Sbjct: 328 EQEVVNLFIPTQAVGAIIGKKGQHIKQLARFAGASIKIAPAEGPDATERMVIITGPPEAQ 387
Query: 107 MRHSPAQDAVMRVHSRIAEIG-FEPGQAVV--ARLLVHSQQIGCLLGRGGHIVSEMRRAT 163
+ A R+ ++ E F P + V A + V S G ++G+GG V+E++ T
Sbjct: 388 FK------AQGRIFGKLKEENFFNPKEEVKLEAHIKVPSFAAGRVIGKGGKTVNELQNLT 441
Query: 164 GASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDA 198
A + + P+DQ P + IV++IG++ + Q A
Sbjct: 442 SAEV-IVPRDQTP--DENEEVIVKIIGHFFASQTA 473
Score = 38.5 bits (88), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 43/194 (22%), Positives = 87/194 (44%), Gaps = 16/194 (8%)
Query: 17 QRGYAPGYHSRGYSSGPGHETVGGRNRMFYEEEVVFKLLCHLDKVGSLIGKGGSIVRTFQ 76
QR G+ SR S PG G + + + ++L VG++IGK G ++
Sbjct: 93 QRSRRGGHASREQGSSPG----GSQPKQL---DFPLRMLVPTQFVGAIIGKEGLTIKNLT 145
Query: 77 NETGASIKI--ADILPDSEERIVVISARENSEMRHSPAQDAVMRVHSRIAEIGFEPGQAV 134
+T + + I + +E+ I + + E S A ++ + + A+ + + +
Sbjct: 146 KQTQSKVDIHRKENAGAAEKPITIHATPEGC----SEACRMILDIMQKEAD-ETKSAEEI 200
Query: 135 VARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHS 194
++L H+ +G L+G+ G + ++ + TG I + P Q +P + + V G+ +
Sbjct: 201 PLKILAHNSLVGRLIGKEGRNLKKIEQDTGTKITISPL-QDLTIYNP-ERTITVKGSTEA 258
Query: 195 VQDALFHITSRLRE 208
+A I +LRE
Sbjct: 259 CSNAEVEIMKKLRE 272
>gi|426343191|ref|XP_004038198.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2
[Gorilla gorilla gorilla]
Length = 376
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 82/157 (52%), Gaps = 13/157 (8%)
Query: 46 YEEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADIL-PDSEERIVVISAREN 104
Y E+ + L VG++IGK G+ ++ GASIKIA PD ER+V+I+
Sbjct: 201 YPEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITGPPE 260
Query: 105 SEMRHSPAQDAVMRVHSRIAEIG-FEPGQAVV--ARLLVHSQQIGCLLGRGGHIVSEMRR 161
++ + A R+ ++ E F P + V A + V S G ++G+GG V+E++
Sbjct: 261 AQFK------AQGRIFGKLKEENFFNPKEEVKLEAHIRVPSSTAGRVIGKGGKTVNELQN 314
Query: 162 ATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDA 198
T A + + P+DQ P + IV++IG++ + Q A
Sbjct: 315 LTSAEV-IVPRDQTP--DENEEVIVRIIGHFFASQTA 348
>gi|90086375|dbj|BAE91740.1| unnamed protein product [Macaca fascicularis]
Length = 283
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 70/286 (24%), Positives = 116/286 (40%), Gaps = 41/286 (14%)
Query: 134 VVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYH 193
V RL+V + Q G L+G+GG + E+R +TGA ++V D P + + + + G
Sbjct: 25 VTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQV-AGDMLP---NSTERAITIAGVPQ 80
Query: 194 SVQDALFHITSRLRETIFPMKRPGPNNGHSYLPPFPEMPPPPFRPRHNPASPGSYPSPVG 253
SV + + I + ET+ + + P P P P G
Sbjct: 81 SVTECVKQICLVMLETL-------SQSPQGRVMTIPYQPMPASSPVICAGGQDRCSDAAG 133
Query: 254 PFHSMDRGMGPSQPFD-HQAAFSHGMDPMVPPNSDRIPFPYGSERPGHGPTFDRPPSPRS 312
H+ GP P D + H + P+ D + + H
Sbjct: 134 YPHATHDLEGP--PLDAYSIQGQHTISPL-----DLAKLNQVARQQSHFAMMH------- 179
Query: 313 WTPQGVGGGDPRGFDASSGFTPRNRPVESGNHAAI--LTSTTIEVVIPQLYMAHVYGENN 370
GG G D+SS P G A++ T TT E+ IP + + G
Sbjct: 180 ------GGTGFAGIDSSS-------PEVKGYWASLDASTQTTHELTIPNNLIGCIIGRQG 226
Query: 371 SNLSHIRQISGANVVVNDPKPGATEGVVMVSGTSDQMRAAQSLIHA 416
+N++ IRQ+SGA + + +P G++ V ++G++ + AQ LI+A
Sbjct: 227 ANINEIRQMSGAQIKIANPVEGSSGRQVTITGSAASISLAQYLINA 272
Score = 45.4 bits (106), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 34/52 (65%), Gaps = 1/52 (1%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIA-DILPDSEERIVVIS 100
V +L+ + GSLIGKGG ++ + TGA +++A D+LP+S ER + I+
Sbjct: 25 VTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIA 76
>gi|380806987|gb|AFE75369.1| RNA-binding protein Nova-2, partial [Macaca mulatta]
Length = 296
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 76/171 (44%), Gaps = 37/171 (21%)
Query: 62 GSLIGKGGSIVRTFQNETGASIKIA---DILPDSEERIVVISARENSEMRHSPAQDAVMR 118
GS+IGKGG + Q ETGA+IK++ D P + ER+ ++ +A+
Sbjct: 1 GSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTA----------EALNA 50
Query: 119 VHSRIAE---------------------IGFEPGQAVVARLLVHSQQIGCLLGRGGHIVS 157
VHS IAE P +A A+L+V + G ++G+GG V
Sbjct: 51 VHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVPNSTAGLIIGKGGATVK 110
Query: 158 EMRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRE 208
+ +GA +++ Q P + + +V V G V A+ I +++E
Sbjct: 111 AVMEQSGAWVQL---SQKPEGINLQERVVTVSGEPEQVHKAVSAIVQKVQE 158
>gi|198469242|ref|XP_001354960.2| GA14212 [Drosophila pseudoobscura pseudoobscura]
gi|198146781|gb|EAL32016.2| GA14212 [Drosophila pseudoobscura pseudoobscura]
Length = 521
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 74/152 (48%), Gaps = 14/152 (9%)
Query: 59 DKVGSLIGKGGSIVRTFQNETGASIKIADI-----LPDSEERIVVISARENSEMRHSPAQ 113
+ VG++IG GS +R+ + AS+KIA + L ER V I + +
Sbjct: 312 NAVGAIIGTKGSHIRSIMRFSNASLKIAPLDADKPLDQQTERKVTIVGTPEGQWK----- 366
Query: 114 DAVMRVHSRIAEIGFEPGQ---AVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVF 170
A + ++ E GF G + LLV S Q+G ++G+GG V E++R TG+ I++
Sbjct: 367 -AQYMIFEKMREEGFMCGTDDVRLTVELLVASSQVGRIIGKGGQNVRELQRVTGSVIKLP 425
Query: 171 PKDQAPRCGSPHDEIVQVIGNYHSVQDALFHI 202
AP G + V +IG ++SVQ I
Sbjct: 426 EHALAPPAGGDEETPVHIIGPFYSVQMVAIFI 457
Score = 41.2 bits (95), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 32/161 (19%), Positives = 73/161 (45%), Gaps = 12/161 (7%)
Query: 52 FKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKI--ADILPDSEERIVVISARENSEMRH 109
++L + VG++IG+ GS +RT ++ A + + + + E+ I + EN
Sbjct: 87 LRILVQSEMVGAIIGRQGSTIRTITQQSRARVDVHRKENVGSLEKSITIYGNPEN----- 141
Query: 110 SPAQDAVMRVHSRIAEIGFEPGQA-VVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIR 168
+A R+ + + + + ++L H+ IG ++G+ G+ + + + T I
Sbjct: 142 --CTNACKRILEVMQQEALSTNKGEICLKILAHNNLIGRIIGKSGNTIKRIMQDTDTKIT 199
Query: 169 VFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRET 209
V + + I+ V G ++ A I+++LR++
Sbjct: 200 VSSINDINSFN--LERIITVKGLIENMSRAENQISTKLRQS 238
>gi|322708646|gb|EFZ00223.1| hypothetical protein MAA_04000 [Metarhizium anisopliae ARSEF 23]
Length = 456
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 90/373 (24%), Positives = 158/373 (42%), Gaps = 55/373 (14%)
Query: 60 KVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMRHSPAQDAVMRV 119
+ ++IGKGG V + + A ++D + ERI+ +S A ++R
Sbjct: 118 EAATIIGKGGENVSNIRKMSNAKCTVSDYQKGAVERILTVSGI---------AFGLIIRT 168
Query: 120 HSR--IAEIGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAPR 177
+ + E + RLL+ IG ++G+GG + E++ A+GA R+ D
Sbjct: 169 LNNEPLGEASTASSKTYPLRLLIPHILIGSIIGKGGARIREIQEASGA--RLNASDSCLP 226
Query: 178 CGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKRPGPNNGHSYL----PPFPEMP- 232
S + + V+G +V A +++ S L E + +R G +Y P +P
Sbjct: 227 MSS--ERSLVVMGVADAVHIATYYVGSTLLEQLN--ERFGGPAASAYATRSGAPAGSIPG 282
Query: 233 ---PPPFRPRHNPASPGSYPSPVGPFHSMDRGMGPSQPFDHQAAFSHGMDPMVPPNSDRI 289
P+ P+ PAS G Y P DR P + + H PPN +
Sbjct: 283 GMQVVPYSPQ--PAS-GHYGRPENYGRHQDRRAHHMPPATYPPHYPHNA---APPNP-AM 335
Query: 290 PFPYGSERPGHG----PTFDRPPSPRSWTPQGVGGGDPRGFDASSGFTPRNRPVESGNHA 345
P YG ++ +G T PP PQ GG P+ P++ G
Sbjct: 336 PMQYGGQQAAYGGAPHATQHMPPH---VGPQPHGG-------------PQGPPMQHGMPG 379
Query: 346 AILTSTTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATEGVVMVSGTSD 405
LT ++ IP + + G+ ++ IRQISG+ + +N+P+ + E +V ++GT +
Sbjct: 380 GPLTQ---QIFIPNDMVGAIIGKGGQKINEIRQISGSVIKINEPQDNSNERLVTITGTEE 436
Query: 406 QMRAAQSLIHAFI 418
R A ++++ +
Sbjct: 437 CNRMALYMLYSRL 449
Score = 42.0 bits (97), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 61/156 (39%)
Query: 249 PSPVGPFHSMDRGMGPSQPFDHQAAFSHGMDPMVPPNSDRIPFPYGSERPGHGPTFDRPP 308
P P ++ PS+ D A +D ++ + +R + D
Sbjct: 6 PQPTSTKRPLEEASSPSRATDQPDAKRPALDKVIKNDEEREASESTIDVADKNGDEDGSK 65
Query: 309 SPRSWTPQGVGGGDPRGFDASSGFTPRNRPVESGNHAAILTSTTIEVVIPQLYMAHVYGE 368
S + P GG D + AS+ + S + I VI A + G+
Sbjct: 66 SDQPDVPVTDGGSDTKAAGASNATASSDTAANSAAAHDETSWIHIRAVISSPEAATIIGK 125
Query: 369 NNSNLSHIRQISGANVVVNDPKPGATEGVVMVSGTS 404
N+S+IR++S A V+D + GA E ++ VSG +
Sbjct: 126 GGENVSNIRKMSNAKCTVSDYQKGAVERILTVSGIA 161
>gi|345497208|ref|XP_001599286.2| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1-like
[Nasonia vitripennis]
Length = 643
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 75/152 (49%), Gaps = 15/152 (9%)
Query: 59 DKVGSLIGKGGSIVRTFQNETGASIKIADILPDS-----EERIVVISARENSEMRHSPAQ 113
+ VG++IG GS +R +GAS+KIA + D ER V I S+ +
Sbjct: 415 NSVGAIIGTKGSHIRNIIRFSGASVKIAPLESDKPAEQQTERKVTIVGSPESQWK----- 469
Query: 114 DAVMRVHSRIAEIGFEPGQA---VVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVF 170
A + ++ E GF G + +LV S Q+G ++G+GG V E++R TG+ I++
Sbjct: 470 -AQYLIFEKMREEGFVSGTEDVRLTVEILVPSAQVGRIIGKGGQNVRELQRVTGSVIKLS 528
Query: 171 PKDQAPRCGSPHDEIVQVIGNYHSVQDALFHI 202
+ P + + V +IG + SVQ A I
Sbjct: 529 EQQATPPT-ADEETTVHIIGPFFSVQSAQRRI 559
Score = 47.0 bits (110), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 38/160 (23%), Positives = 75/160 (46%), Gaps = 10/160 (6%)
Query: 52 FKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKI--ADILPDSEERIVVISARENSEMRH 109
++L D VG++IG+ GS +R T A + + D L E+ I + EN
Sbjct: 190 LRILVQSDMVGAIIGRQGSTIRQITQMTRARVDVHRKDNLGSLEKAITIYGNPENC---- 245
Query: 110 SPAQDAVMRVHSRIAEIGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRV 169
+ A ++ V + A G+ + ++L H+ IG ++G+GG+ + + + T I V
Sbjct: 246 TNACKKILEVMHQEAS-NTNKGE-ITLKILAHNNLIGRIIGKGGNTIKRIMQDTDTKITV 303
Query: 170 FPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRET 209
+ + I+ V G+ ++ A I+++LR++
Sbjct: 304 SSINDINSFN--LERIITVKGSIENMSKAEAMISNKLRQS 341
>gi|396578134|ref|NP_001257528.1| insulin-like growth factor 2 mRNA-binding protein 2 isoform 2
[Rattus norvegicus]
Length = 524
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 81/157 (51%), Gaps = 13/157 (8%)
Query: 46 YEEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADIL-PDSEERIVVISAREN 104
Y E+ L VG++IGK G+ ++ GASIKIA PD ER+V+I+
Sbjct: 349 YPEQETVSLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITGPPE 408
Query: 105 SEMRHSPAQDAVMRVHSRIAEIG-FEPGQAVV--ARLLVHSQQIGCLLGRGGHIVSEMRR 161
++ + A R+ ++ E F P + V A + V S G ++G+GG V+E++
Sbjct: 409 AQFK------AQGRIFGKLKEENFFNPKEEVKLEAHIRVPSSTAGRVIGKGGKTVNELQN 462
Query: 162 ATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDA 198
T A + + P+DQ P + IV++IG++ + Q A
Sbjct: 463 LTSAEV-IVPRDQTP--DENEEVIVRIIGHFFASQTA 496
>gi|198430105|ref|XP_002128022.1| PREDICTED: similar to heterogeneous nuclear ribonucleoprotein K,
like [Ciona intestinalis]
Length = 323
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 80/178 (44%), Gaps = 21/178 (11%)
Query: 43 RMFYEEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISAR 102
R ++ + + L G +IGKGG+ ++ ++ A I I D DS ER++ ISA
Sbjct: 51 RARHQTHIQMRCLVPAKCAGGIIGKGGTNIKDMRDTFKAQINIPD--SDSRERVLRISAS 108
Query: 103 ENSEMRHSPAQDAVMRVHSRIAE--------IGFEPGQAVVARLLVHSQQIGCLLGRGGH 154
S + ++R I E G +P + +LLVH Q G ++G G
Sbjct: 109 IES------CGEILLRTLPVINEAALNGPGRFGRDPKDDMSIKLLVHQSQAGGIIGVKGF 162
Query: 155 IVSEMRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFP 212
+ E+R TGA+I+V Q C + D + V G+ + + I L ETI P
Sbjct: 163 KIKELREKTGATIKV----QQDCCPNSTDRVCMVAGSAEIISSCVVLIL-ELLETIPP 215
>gi|242002844|ref|XP_002436065.1| RNA-binding protein Nova-1, putative [Ixodes scapularis]
gi|215499401|gb|EEC08895.1| RNA-binding protein Nova-1, putative [Ixodes scapularis]
Length = 474
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/240 (24%), Positives = 103/240 (42%), Gaps = 57/240 (23%)
Query: 39 GGRNRMFYEEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIA---DILPDSEER 95
GG N ++ FK+L G++IGKGG + Q E GA +K++ D P + ER
Sbjct: 44 GGGNGTYH-----FKILVPAVAAGAIIGKGGETIALLQKEAGARVKMSKSNDFYPGTTER 98
Query: 96 IVVISARENSEMRHSPAQDAVMRVHSRIAE-------------IGFEPGQAV----VARL 138
+ +I+ + + V+R+H I E I F+ Q ++
Sbjct: 99 VCLITG----------SVEGVLRIHEFIMEKIKEKPDPTAKIAIDFDHKQPAEREKQVKI 148
Query: 139 LVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQ----APRCGSPHDEIVQVIGNYHS 194
LV + G ++G+GG + +++ +GA +++ K + A RC + VIG +
Sbjct: 149 LVPNSTAGMIIGKGGSYIKQIKEESGAYVQISQKSKDHALAERC-------ITVIGELEN 201
Query: 195 VQDALFHITSRLRETIFPMKRPGPNNGHSYLPPFPEM--PPPPFRPRHNP-ASPGSYPSP 251
+ A I +++ E P +G + E+ P F P +P A+P S P
Sbjct: 202 NKKACHMILAKIVED--------PQSGSCLHVSYAEVTGPVANFNPTGSPYANPSSSLVP 253
>gi|195401727|ref|XP_002059464.1| GJ17213 [Drosophila virilis]
gi|194142470|gb|EDW58876.1| GJ17213 [Drosophila virilis]
Length = 511
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 83/186 (44%), Gaps = 24/186 (12%)
Query: 41 RNRMFYEEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVIS 100
RNR E ++L G++IGKGG ++ + + A++ + D ER + IS
Sbjct: 16 RNR---RNEETVRILIPSSIAGAVIGKGGQHIQKMRTQYKATVSVDD--SQGPERTIQIS 70
Query: 101 ARENSEMRHSPAQDAVMRVHSRIAEIGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSEMR 160
D+ + + + + + E + RLL+H GC++G+GG + E+R
Sbjct: 71 T----------DIDSTLEIITEMLKYFEERDEEFDVRLLIHQSLAGCVIGKGGQKIKEIR 120
Query: 161 RATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKRPGPNN 220
G + AP+ D +VQ +G V DA+ + + R+T P+K P
Sbjct: 121 DRIGCRFLKVFSNVAPQS---TDRVVQTVGKQSQVIDAVREVITLTRDT--PIKGP---- 171
Query: 221 GHSYLP 226
H+Y P
Sbjct: 172 IHNYDP 177
>gi|148223740|ref|NP_001083021.1| poly(rC)-binding protein 3 [Danio rerio]
gi|134025331|gb|AAI35089.1| Zgc:162999 protein [Danio rerio]
Length = 350
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/133 (33%), Positives = 67/133 (50%), Gaps = 26/133 (19%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMRH 109
+ +LL H +VGS+IGK G V+ + E+ A I +++ + ERIV I+
Sbjct: 16 LTIRLLMHGKEVGSIIGKKGETVKKMREESSARINVSE--GNCPERIVTITG-------- 65
Query: 110 SPAQDAVMRVHSRIAEIGFEP--------GQA-----VVARLLVHSQQIGCLLGRGGHIV 156
DA+ + + IA FE QA V RL+V + Q G L+G+GG +
Sbjct: 66 --PTDAIFKAFAMIA-YKFEEDIINSMSNSQATSKPPVTLRLVVPASQCGSLIGKGGSKI 122
Query: 157 SEMRRATGASIRV 169
EMR +TGA ++V
Sbjct: 123 KEMRESTGAQVQV 135
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 35/52 (67%), Gaps = 1/52 (1%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIA-DILPDSEERIVVIS 100
V +L+ + GSLIGKGGS ++ + TGA +++A D+LP+S ER V IS
Sbjct: 100 VTLRLVVPASQCGSLIGKGGSKIKEMRESTGAQVQVAGDMLPNSTERAVTIS 151
Score = 40.4 bits (93), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 39/67 (58%)
Query: 350 STTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATEGVVMVSGTSDQMRA 409
++T E+ IP + + G + ++ IRQ+SGA + + + G+++ + ++GT +
Sbjct: 266 ASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANAMEGSSDRQITITGTPANISL 325
Query: 410 AQSLIHA 416
AQ LI+A
Sbjct: 326 AQYLINA 332
>gi|417409319|gb|JAA51170.1| Putative polyc-binding alphacp-1, partial [Desmodus rotundus]
Length = 283
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 83/163 (50%), Gaps = 8/163 (4%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMR- 108
+ +LL H +VGS+IGK G V+ + E+GA I I++ + ERI+ ++ N+ +
Sbjct: 23 LTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISE--GNCPERIITLTGPTNAIFKA 80
Query: 109 HSPAQDAVMR-VHSRIAEIGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASI 167
+ D + ++S + V RL+V + Q G L+G+GG + E+R +TGA +
Sbjct: 81 FAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQV 140
Query: 168 RVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETI 210
+V D P + + + + G SV + + I + ET+
Sbjct: 141 QV-AGDMLP---NSTERAITIAGVPQSVTECVKQICLVMLETL 179
>gi|148229933|ref|NP_001086212.1| MGC84166 protein [Xenopus laevis]
gi|49256273|gb|AAH74333.1| MGC84166 protein [Xenopus laevis]
Length = 225
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 66/133 (49%), Gaps = 26/133 (19%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMRH 109
+ +LL H +VGS+IGK G V+ + E+GA I I++ + ERIV I+
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE--GNCPERIVTITG-------- 63
Query: 110 SPAQDAVMRVHSRIAEIGFEPGQA-------------VVARLLVHSQQIGCLLGRGGHIV 156
DA+ + + IA FE V RL+V + Q G L+G+GG +
Sbjct: 64 --PTDAIFKAFAMIA-YKFEEDIINSMSNSTATSKPPVTLRLVVPASQCGSLIGKGGSKI 120
Query: 157 SEMRRATGASIRV 169
E+R +TGA ++V
Sbjct: 121 KEIRESTGAQVQV 133
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 44/81 (54%), Gaps = 11/81 (13%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIA-DILPDSEERIVVISARENSEMR 108
V +L+ + GSLIGKGGS ++ + TGA +++A D+LP+S ER V IS
Sbjct: 98 VTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNSTERAVTISG------- 150
Query: 109 HSPAQDAVMRVHSRIAEIGFE 129
DA+++ +I + E
Sbjct: 151 ---TPDAIIQCVKQICVVMLE 168
>gi|396578132|ref|NP_001257527.1| insulin-like growth factor 2 mRNA-binding protein 2 isoform 1
[Rattus norvegicus]
gi|149019899|gb|EDL78047.1| similar to IGF-II mRNA-binding protein 2 (predicted) [Rattus
norvegicus]
Length = 592
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 81/157 (51%), Gaps = 13/157 (8%)
Query: 46 YEEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADIL-PDSEERIVVISAREN 104
Y E+ L VG++IGK G+ ++ GASIKIA PD ER+V+I+
Sbjct: 417 YPEQETVSLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITGPPE 476
Query: 105 SEMRHSPAQDAVMRVHSRIAEIG-FEPGQAVV--ARLLVHSQQIGCLLGRGGHIVSEMRR 161
++ + A R+ ++ E F P + V A + V S G ++G+GG V+E++
Sbjct: 477 AQFK------AQGRIFGKLKEENFFNPKEEVKLEAHIRVPSSTAGRVIGKGGKTVNELQN 530
Query: 162 ATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDA 198
T A + + P+DQ P + IV++IG++ + Q A
Sbjct: 531 LTSAEV-IVPRDQTP--DENEEVIVRIIGHFFASQTA 564
>gi|427792957|gb|JAA61930.1| Putative pasilla, partial [Rhipicephalus pulchellus]
Length = 538
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 99/228 (43%), Gaps = 52/228 (22%)
Query: 52 FKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIA---DILPDSEERIVVISARENSEMR 108
FK+L G++IGKGG + Q E GA +K++ D P + ER+ +I+
Sbjct: 40 FKILVPAVAAGAIIGKGGETIALLQKEAGARVKMSKSNDFYPGTTERVCLITG------- 92
Query: 109 HSPAQDAVMRVHSRIAE-------------IGFEPGQAV----VARLLVHSQQIGCLLGR 151
+ + V+R+H I E I F+ Q ++LV + G ++G+
Sbjct: 93 ---SVEGVLRIHEFIMEKIKEKPDPTAKIAIDFDHKQPAEREKQVKILVPNSTAGMIIGK 149
Query: 152 GGHIVSEMRRATGASIRVFPKDQ----APRCGSPHDEIVQVIGNYHSVQDALFHITSRLR 207
GG + +++ +GA +++ K + A RC + VIG + + A I +++
Sbjct: 150 GGSYIKQIKEESGAYVQISQKSKDHALAERC-------ITVIGEMDNNKKACQLILAKIV 202
Query: 208 ETIFPMKRPGPNNGHSYLPPFPEM--PPPPFRPRHNP-ASPGSYPSPV 252
E P +G + E+ P F P +P A+P S S V
Sbjct: 203 ED--------PQSGSCLHVSYAEVTGPVANFNPTGSPYANPSSVHSTV 242
>gi|383858850|ref|XP_003704912.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1-like
[Megachile rotundata]
Length = 624
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/152 (32%), Positives = 75/152 (49%), Gaps = 15/152 (9%)
Query: 61 VGSLIGKGGSIVRTFQNETGASIKIADILPDS-----EERIVVISARENSEMRHSPAQDA 115
VG++IG GS +R +GAS+KIA I D ER V I S+ + A
Sbjct: 416 VGAIIGTKGSHIRNIIRFSGASVKIAPIEQDKPAEQQTERKVTIVGSPESQWK------A 469
Query: 116 VMRVHSRIAEIGFEPGQA---VVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPK 172
+ ++ E GF G + +LV S Q+G ++G+GG V E++R TG+ I+ +
Sbjct: 470 QYLIFEKMREEGFVAGTDDVRLTIEILVPSAQVGRIIGKGGQNVRELQRVTGSIIK-LSE 528
Query: 173 DQAPRCGSPHDEIVQVIGNYHSVQDALFHITS 204
Q+ + + V +IG + SVQ A I S
Sbjct: 529 QQSTSPSADEEATVHIIGPFFSVQSAQRRIRS 560
Score = 46.2 bits (108), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 38/160 (23%), Positives = 73/160 (45%), Gaps = 10/160 (6%)
Query: 52 FKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKI--ADILPDSEERIVVISARENSEMRH 109
++L D VG++IG+ GS +R T A + + D + E+ I + EN
Sbjct: 189 LRILVQSDMVGAIIGRQGSTIRQITQMTRARVDVHRKDNVGSLEKAITIYGNPENC---- 244
Query: 110 SPAQDAVMRVHSRIAEIGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRV 169
+ A ++ V + A G+ + ++L H+ IG ++G+GG + + + T I V
Sbjct: 245 TNACKKILEVMQQEAN-SINKGE-ITLKILAHNNLIGRIIGKGGTTIKRIMQDTDTKITV 302
Query: 170 FPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRET 209
+ + I+ V G ++ A I+S+LR++
Sbjct: 303 SSINDINSFN--LERIITVKGTIENMSKAESMISSKLRQS 340
>gi|395536911|ref|XP_003770452.1| PREDICTED: poly(rC)-binding protein 3 isoform 3 [Sarcophilus
harrisii]
Length = 318
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 66/133 (49%), Gaps = 26/133 (19%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMRH 109
+ +LL H +VGS+IGK G V+ + E+GA I I++ + ERIV I+
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE--GNCPERIVTITG-------- 63
Query: 110 SPAQDAVMRVHSRIAEIGFEPGQA-------------VVARLLVHSQQIGCLLGRGGHIV 156
DA+ + + IA FE V RL+V + Q G L+G+GG +
Sbjct: 64 --PTDAIFKAFAMIA-YKFEEDIINSMSNSTATSKPPVTLRLVVPASQCGSLIGKGGSKI 120
Query: 157 SEMRRATGASIRV 169
E+R +TGA ++V
Sbjct: 121 KEIRESTGAQVQV 133
Score = 43.5 bits (101), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 42/74 (56%)
Query: 350 STTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATEGVVMVSGTSDQMRA 409
++T E+ IP + + G + ++ IRQ+SGA + + + G++E + ++GT +
Sbjct: 240 ASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQITITGTPANISL 299
Query: 410 AQSLIHAFILCGVT 423
AQ LI+A + VT
Sbjct: 300 AQYLINARLTSEVT 313
>gi|440907529|gb|ELR57670.1| RNA-binding protein Nova-2, partial [Bos grunniens mutus]
Length = 298
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 81/186 (43%), Gaps = 37/186 (19%)
Query: 47 EEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIA---DILPDSEERIVVISARE 103
E E K+L GS+IGKGG + Q ETGA+IK++ D P + ER+ ++
Sbjct: 2 EGEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQG-- 59
Query: 104 NSEMRHSPAQDAVMRVHSRIAE---------------------IGFEPGQAVVARLLVHS 142
+A+ VHS IAE P +A A+L+V +
Sbjct: 60 --------TAEALNAVHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVPN 111
Query: 143 QQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHI 202
G ++G+GG V + +GA +++ Q P + + +V V G V A+ I
Sbjct: 112 STAGLIIGKGGATVKAVMEQSGAWVQL---SQKPEGINLQERVVTVSGEPEQVHKAVSAI 168
Query: 203 TSRLRE 208
+++E
Sbjct: 169 VQKVQE 174
>gi|115496720|ref|NP_001070027.1| insulin-like growth factor 2 mRNA-binding protein 1 [Danio rerio]
gi|123908308|sp|Q08CK7.1|IF2B1_DANRE RecName: Full=Insulin-like growth factor 2 mRNA-binding protein 1;
Short=IGF2 mRNA-binding protein 1; Short=IMP-1; AltName:
Full=IGF-II mRNA-binding protein 1; AltName: Full=VICKZ
family member 1
gi|115313169|gb|AAI24197.1| Insulin-like growth factor 2 mRNA binding protein 1 [Danio rerio]
gi|182891894|gb|AAI65463.1| Igf2bp1 protein [Danio rerio]
Length = 598
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 82/153 (53%), Gaps = 15/153 (9%)
Query: 61 VGSLIGKGGSIVRTFQNETGASIKIADI-LPDSEERIVVISARENSEMRHSPAQDAVMRV 119
VG+LIGK G ++ GASIKIA PDS+ R+V+++ ++ + A R+
Sbjct: 419 VGALIGKKGQHIKQLSRFAGASIKIAPAEAPDSKMRMVIVTGPPEAQFK------AQGRI 472
Query: 120 HSRIAEIGF---EPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAP 176
+ ++ E F + + + V + G ++G+GG V+E++ T A + V P++Q P
Sbjct: 473 YGKLKEENFFGPKEEVKLETHIKVAAAAAGRVIGKGGKTVNELQNLTAAEV-VVPREQTP 531
Query: 177 RCGSPHDE-IVQVIGNYHSVQDALFHITSRLRE 208
HD+ IV++IG++++ Q A I L +
Sbjct: 532 ---DEHDQVIVKIIGHFYASQLAQRKIRDILTQ 561
>gi|124021196|gb|ABM88866.1| IGF2 mRNA-binding protein 1 [Danio rerio]
Length = 598
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 82/153 (53%), Gaps = 15/153 (9%)
Query: 61 VGSLIGKGGSIVRTFQNETGASIKIADI-LPDSEERIVVISARENSEMRHSPAQDAVMRV 119
VG+LIGK G ++ GASIKIA PDS+ R+V+++ ++ + A R+
Sbjct: 419 VGALIGKKGQHIKQLSRFAGASIKIAPAEAPDSKMRMVIVTGPPEAQFK------AQGRI 472
Query: 120 HSRIAEIGF---EPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAP 176
+ ++ E F + + + V + G ++G+GG V+E++ T A + V P++Q P
Sbjct: 473 YGKLKEENFFGPKEEVKLETHIKVAAAAAGRVIGKGGKTVNELQNLTAAEV-VVPREQTP 531
Query: 177 RCGSPHDE-IVQVIGNYHSVQDALFHITSRLRE 208
HD+ IV++IG++++ Q A I L +
Sbjct: 532 ---DEHDQVIVKIIGHFYASQLAQRKIRDILTQ 561
>gi|395752934|ref|XP_002830848.2| PREDICTED: poly(rC)-binding protein 3 [Pongo abelii]
Length = 432
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 74/153 (48%), Gaps = 19/153 (12%)
Query: 30 SSGPGHETVGGRNRMFYEEEVVFKLLCH----------LDKVGSLIGKGGSIVRTFQNET 79
++ P GG MF++ + L C L +VGS+IGK G V+ + E+
Sbjct: 17 ATSPAAPVCGG---MFWKPGCMELLGCRGSRAAVGPELLWEVGSIIGKKGETVKKMREES 73
Query: 80 GASIKIADILPDSEERIVVISARENSEMRHSPAQDAVMRVHSRIAEIGFEPGQA---VVA 136
GA I I++ + ERIV I+ ++ + A A I + P + V
Sbjct: 74 GARINISE--GNCPERIVTITGPTDAIFKAF-AMIAYKFEEDIINSMSNSPATSKPPVTL 130
Query: 137 RLLVHSQQIGCLLGRGGHIVSEMRRATGASIRV 169
RL+V + Q G L+G+GG + E+R +TGA ++V
Sbjct: 131 RLVVPASQCGSLIGKGGSKIKEIRESTGAQVQV 163
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 44/81 (54%), Gaps = 11/81 (13%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIA-DILPDSEERIVVISARENSEMR 108
V +L+ + GSLIGKGGS ++ + TGA +++A D+LP+S ER V IS
Sbjct: 128 VTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNSTERAVTISG------- 180
Query: 109 HSPAQDAVMRVHSRIAEIGFE 129
DA+++ +I + E
Sbjct: 181 ---TPDAIIQCVKQICVVMLE 198
Score = 39.3 bits (90), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 34/69 (49%), Gaps = 1/69 (1%)
Query: 352 TIEVVIPQLYMAHVYGENNSNLSHIRQISGANV-VVNDPKPGATEGVVMVSGTSDQMRAA 410
T+ +V+P + G+ S + IR+ +GA V V D P +TE V +SGT D +
Sbjct: 129 TLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNSTERAVTISGTPDAIIQC 188
Query: 411 QSLIHAFIL 419
I +L
Sbjct: 189 VKQICVVML 197
>gi|345495410|ref|XP_001602171.2| PREDICTED: hypothetical protein LOC100118119 [Nasonia vitripennis]
Length = 533
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 84/178 (47%), Gaps = 34/178 (19%)
Query: 52 FKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIA---DILPDSEERIVVISARENSEMR 108
K+L G++IGKGG + Q +TGA +K++ D P + ER+ +I+
Sbjct: 47 LKVLVPGVAAGAIIGKGGETIAQLQKDTGARVKMSKSHDFYPGTTERVCLITG------- 99
Query: 109 HSPAQDAVMRVHSRIAE-------------IGFEPGQAVVAR-----LLVHSQQIGCLLG 150
+ DA+M V I E + F+ G+A R +LV + G ++G
Sbjct: 100 ---SVDAIMAVMDFIMEKIREKPDLTTKTTVDFDSGKATAERDKQVKILVPNSTAGMIIG 156
Query: 151 RGGHIVSEMRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRE 208
+ G+ + +++ +G+ +++ Q + S + + VIG + ++AL I +++ +
Sbjct: 157 KAGNYIKQIKEESGSYVQI---SQKAKDVSLQERCITVIGEKENNRNALLMILAKVAD 211
>gi|444513545|gb|ELV10391.1| Poly(rC)-binding protein 4 [Tupaia chinensis]
Length = 399
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 99/222 (44%), Gaps = 42/222 (18%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIA-DILPDSEERIVVISARENSEMR 108
V +L+ + GSLIGK G+ ++ + TGA +++A D+LP+S ER V +S ++ +
Sbjct: 102 VTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQVAGDLLPNSTERAVTVSGVPDAIIL 161
Query: 109 HSPAQDAVMRVHSRI---------AEI--------------------GFEPG-QAVVARL 138
AV+ + AE+ G +P Q
Sbjct: 162 CVRQICAVILEGFSVQGQYGAVTPAEVTKLQQLSGHAVPFASPSVVPGLDPSTQTSSQEF 221
Query: 139 LVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDA 198
LV + IGC++GR G +SE+R+ +GA I++ +QA G H V + G+ S+ A
Sbjct: 222 LVPNDLIGCVIGRQGSKISEIRQMSGAHIKI--GNQAEGAGERH---VTITGSPVSIALA 276
Query: 199 LFHITSRLRETIFPMKRPGPNNGHSYL-----PPFPEMPPPP 235
+ IT+ L ET P + + L PP +P P
Sbjct: 277 QYLITACL-ETAKSTSGGTPGSAPADLPAPFSPPLTALPTAP 317
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 63/128 (49%), Gaps = 16/128 (12%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMRH 109
+ ++L H +VGS+IGK G V+ + ++ A I I++ ERI I+ + + H
Sbjct: 18 LTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISE--GSCPERITTITG-STAAVFH 74
Query: 110 SPAQDAVMRVHSRIAE-IGFEPGQA-------VVARLLVHSQQIGCLLGRGGHIVSEMRR 161
AV + ++ E + P V RL++ + Q G L+G+ G + E+R
Sbjct: 75 -----AVSMIAFKLDEDLCAAPANGSNVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRE 129
Query: 162 ATGASIRV 169
TGA ++V
Sbjct: 130 TTGAQVQV 137
Score = 40.8 bits (94), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 36/65 (55%)
Query: 354 EVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATEGVVMVSGTSDQMRAAQSL 413
E ++P + V G S +S IRQ+SGA++ + + GA E V ++G+ + AQ L
Sbjct: 220 EFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQAEGAGERHVTITGSPVSIALAQYL 279
Query: 414 IHAFI 418
I A +
Sbjct: 280 ITACL 284
>gi|340722697|ref|XP_003399740.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1-like
isoform 1 [Bombus terrestris]
Length = 627
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/150 (32%), Positives = 75/150 (50%), Gaps = 15/150 (10%)
Query: 61 VGSLIGKGGSIVRTFQNETGASIKIADILPDS-----EERIVVISARENSEMRHSPAQDA 115
VG++IG GS +R +GAS+KIA I D +R V I S+ + A
Sbjct: 416 VGAIIGSKGSHIRNIIRFSGASVKIAPIEQDKPVEQQNDRKVTIVGSPESQWK------A 469
Query: 116 VMRVHSRIAEIGFEPGQA---VVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPK 172
+ ++ E GF G + +LV S Q+G ++G+GG V E++R TG+ I+ +
Sbjct: 470 QYLIFEKMREEGFVGGTEDVRLTIEILVPSTQVGRIIGKGGQNVRELQRVTGSIIK-LSE 528
Query: 173 DQAPRCGSPHDEIVQVIGNYHSVQDALFHI 202
Q+ + + VQ+IG + SVQ A I
Sbjct: 529 QQSTSPSADEEATVQIIGPFFSVQSAQRRI 558
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 86/415 (20%), Positives = 157/415 (37%), Gaps = 87/415 (20%)
Query: 52 FKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKI--ADILPDSEERIVVISARENSEMRH 109
++L + VG++IG+ GS +R T A + + D L +E+ I + EN
Sbjct: 189 LRILVQSEMVGAIIGRQGSTIRQITQMTRARVDVHRKDSLGAAEKAITIYGNPENC---- 244
Query: 110 SPAQDAVMRVHSRIAEIGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRV 169
+ A +M V + A G G+ + R+L H+ IG ++G+GG + ++ + T I V
Sbjct: 245 TNACKKIMEVTQQEA-YGLSKGE-ISLRILAHNNLIGRIIGKGGTTIKKIMQDTDTKITV 302
Query: 170 FPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKRPGPNNGHSYLPPFP 229
+ + I+ V G+ ++ A I+S+LR+ SY
Sbjct: 303 SSINDINNFN--LERIITVKGSIDNMSKAESMISSKLRQ--------------SYENDLQ 346
Query: 230 EMPP-----PPFRPRHNPASPGSYPSPVGPFHSMDRGMGPSQPFDHQAAFSHGMDPMVPP 284
M P P P ++ G S GP G GP+ P+ +Q + P
Sbjct: 347 AMAPQSLMFPGLHPMAMMSTAGMGYSSRGPGL---YGSGPA-PYPYQTSL---------P 393
Query: 285 NSDRIPFPYGSERPGHGPTFDRPPSPRSWTPQGVGGGDPRGFDASSGFTPR------NRP 338
IP E F P+ G G R SG + + ++P
Sbjct: 394 TQQGIPIGDTQE-----TAFLYIPNTSVGAIIGSKGSHIRNIIRFSGASVKIAPIEQDKP 448
Query: 339 VESGNHAAIL------------------------------TSTTIEVVIPQLYMAHVYGE 368
VE N + TIE+++P + + G+
Sbjct: 449 VEQQNDRKVTIVGSPESQWKAQYLIFEKMREEGFVGGTEDVRLTIEILVPSTQVGRIIGK 508
Query: 369 NNSNLSHIRQISGANVVVNDPKPGA----TEGVVMVSGTSDQMRAAQSLIHAFIL 419
N+ +++++G+ + +++ + + E V + G +++AQ I A +L
Sbjct: 509 GGQNVRELQRVTGSIIKLSEQQSTSPSADEEATVQIIGPFFSVQSAQRRIRAMVL 563
>gi|350424346|ref|XP_003493765.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1-like
[Bombus impatiens]
Length = 626
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/150 (32%), Positives = 75/150 (50%), Gaps = 15/150 (10%)
Query: 61 VGSLIGKGGSIVRTFQNETGASIKIADILPDS-----EERIVVISARENSEMRHSPAQDA 115
VG++IG GS +R +GAS+KIA I D +R V I S+ + A
Sbjct: 416 VGAIIGSKGSHIRNIIRFSGASVKIAPIEQDKPVEQQNDRKVTIVGSPESQWK------A 469
Query: 116 VMRVHSRIAEIGFEPGQA---VVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPK 172
+ ++ E GF G + +LV S Q+G ++G+GG V E++R TG+ I+ +
Sbjct: 470 QYLIFEKMREEGFVGGTEDVRLTIEILVPSTQVGRIIGKGGQNVRELQRVTGSIIK-LSE 528
Query: 173 DQAPRCGSPHDEIVQVIGNYHSVQDALFHI 202
Q+ + + VQ+IG + SVQ A I
Sbjct: 529 QQSTSPSADEEATVQIIGPFFSVQSAQRRI 558
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 86/415 (20%), Positives = 157/415 (37%), Gaps = 87/415 (20%)
Query: 52 FKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKI--ADILPDSEERIVVISARENSEMRH 109
++L + VG++IG+ GS +R T A + + D L +E+ I + EN
Sbjct: 189 LRILVQSEMVGAIIGRQGSTIRQITQMTRARVDVHRKDSLGAAEKAITIYGNPENC---- 244
Query: 110 SPAQDAVMRVHSRIAEIGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRV 169
+ A +M V + A G G+ + R+L H+ IG ++G+GG + ++ + T I V
Sbjct: 245 TNACKKIMEVTQQEA-YGLSKGE-ISLRILAHNNLIGRIIGKGGTTIKKIMQDTDTKITV 302
Query: 170 FPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKRPGPNNGHSYLPPFP 229
+ + I+ V G+ ++ A I+S+LR+ SY
Sbjct: 303 SSINDINNFN--LERIITVKGSIDNMSKAESMISSKLRQ--------------SYENDLQ 346
Query: 230 EMPP-----PPFRPRHNPASPGSYPSPVGPFHSMDRGMGPSQPFDHQAAFSHGMDPMVPP 284
M P P P ++ G S GP G GP+ P+ +Q + P
Sbjct: 347 AMAPQSLMFPGLHPMAMMSTAGMGYSSRGPGL---YGTGPA-PYPYQTSL---------P 393
Query: 285 NSDRIPFPYGSERPGHGPTFDRPPSPRSWTPQGVGGGDPRGFDASSGFTPR------NRP 338
IP E F P+ G G R SG + + ++P
Sbjct: 394 TQQGIPIGDTQE-----TAFLYIPNTSVGAIIGSKGSHIRNIIRFSGASVKIAPIEQDKP 448
Query: 339 VESGNHAAIL------------------------------TSTTIEVVIPQLYMAHVYGE 368
VE N + TIE+++P + + G+
Sbjct: 449 VEQQNDRKVTIVGSPESQWKAQYLIFEKMREEGFVGGTEDVRLTIEILVPSTQVGRIIGK 508
Query: 369 NNSNLSHIRQISGANVVVNDPKPGA----TEGVVMVSGTSDQMRAAQSLIHAFIL 419
N+ +++++G+ + +++ + + E V + G +++AQ I A +L
Sbjct: 509 GGQNVRELQRVTGSIIKLSEQQSTSPSADEEATVQIIGPFFSVQSAQRRIRAMVL 563
>gi|327267261|ref|XP_003218421.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2-like
[Anolis carolinensis]
Length = 576
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 81/155 (52%), Gaps = 13/155 (8%)
Query: 48 EEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADIL-PDSEERIVVISARENSE 106
E+ V L VG++IGK G ++ GASIKIA P++ ER+V+I+ ++
Sbjct: 402 EQEVVNLFIPTQAVGAIIGKKGQHIKQLARFAGASIKIAPAESPEASERMVIITGPPEAQ 461
Query: 107 MRHSPAQDAVMRVHSRIAEIG-FEPGQAVV--ARLLVHSQQIGCLLGRGGHIVSEMRRAT 163
+ A R+ ++ E F P + V A + V S G ++G+GG V+E++ T
Sbjct: 462 FK------AQGRIFGKLKEENFFNPKEEVKLEAHIKVPSSAAGRVIGKGGKTVNELQNLT 515
Query: 164 GASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDA 198
A + + P+DQ P + +V++IG++ + Q A
Sbjct: 516 SAEV-IVPRDQTP--DENEEVVVKIIGHFFASQTA 547
Score = 38.5 bits (88), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 35/159 (22%), Positives = 75/159 (47%), Gaps = 9/159 (5%)
Query: 52 FKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKI--ADILPDSEERIVVISARENSEMRH 109
++L VG++IGK G ++ +T + + I + +E+ I + + E
Sbjct: 195 LRILVPTQFVGAIIGKEGLTIKNLTKQTQSKVDIHRKENAGAAEKPITIHATPEGC---- 250
Query: 110 SPAQDAVMRVHSRIAEIGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRV 169
S A ++ + + AE + + + ++L H+ +G L+G+ G + ++ + TG I +
Sbjct: 251 SEACRMILDIMQKEAE-ETKSAEEIPLKILAHNSLVGRLIGKEGRNLKKIEQDTGTKITI 309
Query: 170 FPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRE 208
P Q +P + + V G+ + +A I ++LRE
Sbjct: 310 SPL-QDLTIYNP-ERTITVKGSIEACSNAEAEIMNKLRE 346
>gi|238836388|gb|ACR61402.1| IGF-II mRNA-binding protein 2a variant C [Danio rerio]
Length = 453
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 91/175 (52%), Gaps = 22/175 (12%)
Query: 47 EEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADI-LPDSEERIVVISARENS 105
E+EVV+ L VG++IGK G ++ GASIKIA PD +R+V+I+ +
Sbjct: 279 EQEVVY-LFIPTQAVGAIIGKKGQHIKQLARFAGASIKIAPAESPDVTQRMVIITGPPEA 337
Query: 106 EMRHSPAQDAVMRVHSRIAEIGFEPGQAVVARLLVH----SQQIGCLLGRGGHIVSEMRR 161
+ + A R+ ++ E F + V +L H S G ++G+GG V+E++
Sbjct: 338 QFK------AQGRIFGKLKEENFFTAKEEV-KLETHIKVPSSAAGRVIGKGGKTVNELQN 390
Query: 162 ATGASIRVFPKDQAPRCGSPHDEI-VQVIGNYHSVQDALFHITSRLRETIFPMKR 215
T A + + P+DQ P +DE+ V++ G++ + Q A ++RE I +K+
Sbjct: 391 LTSAEV-IVPRDQTP---DENDEVFVKISGHFFASQTA----QRKIREIIQQVKQ 437
>gi|312079928|ref|XP_003142383.1| hypothetical protein LOAG_06799 [Loa loa]
Length = 440
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 88/171 (51%), Gaps = 19/171 (11%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIA---DILPDSEERIVVISARENSE 106
V K+L VG+LIGKGG +R ++E+G ++++ ++ P + ERI ++ + S
Sbjct: 34 VQVKVLIPSAAVGALIGKGGETMRNLKSESGCRLQMSKNQEVYPGTNERICLVKGKIASV 93
Query: 107 MRHSPAQDAVM-RVHSRI-----AEI----GFEPGQAVVARLLVHSQQIGCLLGRGGHIV 156
++ S D ++ ++ ++ ++I G E + +L+V + G ++G+ G +
Sbjct: 94 LKVS---DVILEKIREKVDNNTPSDIFDHKGMERKNEM--KLVVPNTSAGMVIGKSGARI 148
Query: 157 SEMRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSV-QDALFHITSRL 206
E+R TGA+I+V+PK + + I+ + V DAL + ++
Sbjct: 149 KEIREQTGANIQVYPKAGSQEAKVSQERIITIAAEQDEVLMDALQRVLEKV 199
>gi|356564071|ref|XP_003550280.1| PREDICTED: uncharacterized protein LOC100782717 [Glycine max]
Length = 672
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 66/137 (48%), Gaps = 28/137 (20%)
Query: 53 KLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIA---DILPDSEERIVVISARENSEMRH 109
K+ +VG +IGKGG ++ Q ++GA I++ D P+S R V E+
Sbjct: 127 KIDIPNGRVGVIIGKGGETIKYLQLQSGAKIQVTRDMDADPNSATRTV--------ELMG 178
Query: 110 SPAQDAVMRVHSRIAEIGFEP---GQAVVARLL------------VHSQQIGCLLGRGGH 154
SP DA+ I E+ E G +VAR + + + ++G ++G+GG
Sbjct: 179 SP--DAIATAEKLINEVLAEAETGGSGIVARRVAGQAGSDEYVSKIPNNKVGLVIGKGGE 236
Query: 155 IVSEMRRATGASIRVFP 171
+ M+ +TGA I+V P
Sbjct: 237 TIKNMQASTGARIQVIP 253
>gi|340722699|ref|XP_003399741.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1-like
isoform 2 [Bombus terrestris]
Length = 577
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/150 (32%), Positives = 75/150 (50%), Gaps = 15/150 (10%)
Query: 61 VGSLIGKGGSIVRTFQNETGASIKIADILPDS-----EERIVVISARENSEMRHSPAQDA 115
VG++IG GS +R +GAS+KIA I D +R V I S+ + A
Sbjct: 366 VGAIIGSKGSHIRNIIRFSGASVKIAPIEQDKPVEQQNDRKVTIVGSPESQWK------A 419
Query: 116 VMRVHSRIAEIGFEPGQA---VVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPK 172
+ ++ E GF G + +LV S Q+G ++G+GG V E++R TG+ I+ +
Sbjct: 420 QYLIFEKMREEGFVGGTEDVRLTIEILVPSTQVGRIIGKGGQNVRELQRVTGSIIK-LSE 478
Query: 173 DQAPRCGSPHDEIVQVIGNYHSVQDALFHI 202
Q+ + + VQ+IG + SVQ A I
Sbjct: 479 QQSTSPSADEEATVQIIGPFFSVQSAQRRI 508
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 86/415 (20%), Positives = 157/415 (37%), Gaps = 87/415 (20%)
Query: 52 FKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKI--ADILPDSEERIVVISARENSEMRH 109
++L + VG++IG+ GS +R T A + + D L +E+ I + EN
Sbjct: 139 LRILVQSEMVGAIIGRQGSTIRQITQMTRARVDVHRKDSLGAAEKAITIYGNPENC---- 194
Query: 110 SPAQDAVMRVHSRIAEIGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRV 169
+ A +M V + A G G+ + R+L H+ IG ++G+GG + ++ + T I V
Sbjct: 195 TNACKKIMEVTQQEA-YGLSKGE-ISLRILAHNNLIGRIIGKGGTTIKKIMQDTDTKITV 252
Query: 170 FPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKRPGPNNGHSYLPPFP 229
+ + I+ V G+ ++ A I+S+LR+ SY
Sbjct: 253 SSINDINNFN--LERIITVKGSIDNMSKAESMISSKLRQ--------------SYENDLQ 296
Query: 230 EMPP-----PPFRPRHNPASPGSYPSPVGPFHSMDRGMGPSQPFDHQAAFSHGMDPMVPP 284
M P P P ++ G S GP G GP+ P+ +Q + P
Sbjct: 297 AMAPQSLMFPGLHPMAMMSTAGMGYSSRGPGL---YGSGPA-PYPYQTSL---------P 343
Query: 285 NSDRIPFPYGSERPGHGPTFDRPPSPRSWTPQGVGGGDPRGFDASSGFTPR------NRP 338
IP E F P+ G G R SG + + ++P
Sbjct: 344 TQQGIPIGDTQE-----TAFLYIPNTSVGAIIGSKGSHIRNIIRFSGASVKIAPIEQDKP 398
Query: 339 VESGNHAAIL------------------------------TSTTIEVVIPQLYMAHVYGE 368
VE N + TIE+++P + + G+
Sbjct: 399 VEQQNDRKVTIVGSPESQWKAQYLIFEKMREEGFVGGTEDVRLTIEILVPSTQVGRIIGK 458
Query: 369 NNSNLSHIRQISGANVVVNDPKPGA----TEGVVMVSGTSDQMRAAQSLIHAFIL 419
N+ +++++G+ + +++ + + E V + G +++AQ I A +L
Sbjct: 459 GGQNVRELQRVTGSIIKLSEQQSTSPSADEEATVQIIGPFFSVQSAQRRIRAMVL 513
>gi|241025456|ref|XP_002406183.1| poly(rc) binding protein, putative [Ixodes scapularis]
gi|215491885|gb|EEC01526.1| poly(rc) binding protein, putative [Ixodes scapularis]
Length = 398
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 67/243 (27%), Positives = 102/243 (41%), Gaps = 53/243 (21%)
Query: 58 LDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMRHSPAQDAVM 117
+ +VGS+IGK G ++ F+ E+GA I I+D ERIV ++ + +A++
Sbjct: 1 MQEVGSIIGKKGDNIKKFREESGAKINISD--GSCPERIVTVTG----------STEAIL 48
Query: 118 RVHSRIAEIGFE-------------PGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATG 164
+ S IA FE P V RL+V + Q G L+G+GG + E+R A
Sbjct: 49 KAFSLIAR-KFEEVSTSSHSNGSHLPKPPVTLRLIVPASQCGSLIGKGGSKIKEIREAR- 106
Query: 165 ASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKRPGPNNGHSY 224
ASI+V + P + + V V G ++ ++ I + E+ P G +
Sbjct: 107 ASIQV-ASEMLP---NSTERAVTVSGTADAITKCIYQICCVMMES--------PPKGATI 154
Query: 225 -LPPFPEMPPPPFRPRHNPASPGSYPSPVGPFHSMDRGMGPSQPFDHQAAFSHGMDPMVP 283
P P MPP F G Y P P HQ A H P++P
Sbjct: 155 PYRPKPAMPPVIFAGGQAYTVQGQYAIP-----------HPDLTKLHQLALQHA--PLLP 201
Query: 284 PNS 286
+S
Sbjct: 202 GHS 204
Score = 42.0 bits (97), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 36/59 (61%)
Query: 357 IPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATEGVVMVSGTSDQMRAAQSLIH 415
IP + + G+ S ++ IRQ+SGA + +++ + G+ + V +SGT + + AQ LI+
Sbjct: 226 IPNDLIGCIIGKGGSKINEIRQLSGATIKISNSEEGSKDRTVTISGTPEAINLAQYLIN 284
Score = 41.2 bits (95), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 35/52 (67%), Gaps = 2/52 (3%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIA-DILPDSEERIVVIS 100
V +L+ + GSLIGKGGS ++ + E ASI++A ++LP+S ER V +S
Sbjct: 77 VTLRLIVPASQCGSLIGKGGSKIKEIR-EARASIQVASEMLPNSTERAVTVS 127
>gi|395751404|ref|XP_003780598.1| PREDICTED: LOW QUALITY PROTEIN: RNA-binding protein Nova-2 [Pongo
abelii]
Length = 681
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 80/189 (42%), Gaps = 38/189 (20%)
Query: 45 FYEE-EVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILP---DSEERIVVIS 100
F EE E K L GS+IGKGG + Q ETGA+IK +P + ER+ ++
Sbjct: 127 FLEEGEYFLKELIPSYAAGSIIGKGGQTIVQLQKETGATIKXXXXVPWHTGTTERVCLVQ 186
Query: 101 ARENSEMRHSPAQDAVMRVHSRIAE---------------------IGFEPGQAVVARLL 139
+A+ VHS IAE P +A A+L+
Sbjct: 187 G----------TAEALNAVHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQAKLI 236
Query: 140 VHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDAL 199
V + G ++G+GG V + +GA +++ Q P + + +V V G V A+
Sbjct: 237 VPNSTAGLIIGKGGATVKAVMEQSGAWVQL---SQKPEGINLQERVVTVSGEPEQVHKAV 293
Query: 200 FHITSRLRE 208
I +++E
Sbjct: 294 SAIVQKVQE 302
>gi|198465289|ref|XP_001353580.2| GA20351 [Drosophila pseudoobscura pseudoobscura]
gi|198150092|gb|EAL31093.2| GA20351 [Drosophila pseudoobscura pseudoobscura]
Length = 330
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 77/161 (47%), Gaps = 7/161 (4%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMR- 108
+ +L+ +VGS+IGK G IV F+ E+GA I I+D ERIV +S N+
Sbjct: 24 LTIRLIMQGKEVGSIIGKKGEIVNRFREESGAKINISD--GSCPERIVTVSGTTNAIFSA 81
Query: 109 HSPAQDAVMRVHSRIAEIGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIR 168
+ S+ + G + RL+V + Q G L+G+ G + E+R+ TG SI+
Sbjct: 82 FTLITKKFEEWCSQFNDAGKIGKTQIPIRLIVPASQCGSLIGKSGSKIKEIRQTTGCSIQ 141
Query: 169 VFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRET 209
V + P + + V + G+ + ++ I + E+
Sbjct: 142 V-ASEMLP---NSTERAVTLSGSAEQITQCIYQICLVMLES 178
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 97/228 (42%), Gaps = 53/228 (23%)
Query: 52 FKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIA-DILPDSEERIVVIS--ARENSE-- 106
+L+ + GSLIGK GS ++ + TG SI++A ++LP+S ER V +S A + ++
Sbjct: 109 IRLIVPASQCGSLIGKSGSKIKEIRQTTGCSIQVASEMLPNSTERAVTLSGSAEQITQCI 168
Query: 107 ---------------------------------------MRHSPAQDAVMRVHSRIAEIG 127
+ H+ A A+ R A
Sbjct: 169 YQICLVMLESCPRSTVAKNPLASLAALGLAGMNPASTGGINHTAALAALAGSQLRTAN-A 227
Query: 128 FEPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAPRCGSPHDEIVQ 187
Q + V + IGC++G+GG ++E+R+ +GA IR+ ++ R G D +
Sbjct: 228 ANRAQQQQHEMTVSNDLIGCIIGKGGTKIAEIRQISGAMIRISNCEE--REGGNTDRTIT 285
Query: 188 VIGNYHSVQDALFHITSRLRETIFPMKRPG-PNNGHSYLPPFPEMPPP 234
+ GN SV A + I R+ M+ G P G+ Y+ P + P
Sbjct: 286 ISGNPDSVALAQYLINMRI-----SMETAGLPIPGYHYIAPSAIVKTP 328
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 66/312 (21%), Positives = 119/312 (38%), Gaps = 48/312 (15%)
Query: 129 EPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAPRCGSPHDEIVQV 188
+P + RL++ +++G ++G+ G IV+ R +GA I + GS + IV V
Sbjct: 19 DPSVTLTIRLIMQGKEVGSIIGKKGEIVNRFREESGAKINISD-------GSCPERIVTV 71
Query: 189 IGNYHSVQDALFHITSRLRETIFPMKRPGPNNGHSYLPPFPEMPPPPFRPRHNPASPGSY 248
G +++ A IT + E G G + +P +P
Sbjct: 72 SGTTNAIFSAFTLITKKFEEWCSQFNDAGK-IGKTQIPIRLIVPASQC------------ 118
Query: 249 PSPVGPFHSMDRGMGPSQPFDHQAAFSHGMDPMVPPNSDRIPFPYGSERPGHGPTFDRPP 308
S +G S + + + Q A M+P +++R GS +
Sbjct: 119 GSLIGKSGSKIKEIRQTTGCSIQVA-----SEMLPNSTERAVTLSGSAEQITQCIYQICL 173
Query: 309 SPRSWTPQGVGGGDPRGFDASSGFTPRNRPVESG--NHAAILTSTTI------------- 353
P+ +P A+ G N P +G NH A L +
Sbjct: 174 VMLESCPRSTVAKNPLASLAALGLAGMN-PASTGGINHTAALAALAGSQLRTANAANRAQ 232
Query: 354 ----EVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKP---GATEGVVMVSGTSDQ 406
E+ + + + G+ + ++ IRQISGA + +++ + G T+ + +SG D
Sbjct: 233 QQQHEMTVSNDLIGCIIGKGGTKIAEIRQISGAMIRISNCEEREGGNTDRTITISGNPDS 292
Query: 407 MRAAQSLIHAFI 418
+ AQ LI+ I
Sbjct: 293 VALAQYLINMRI 304
>gi|449449385|ref|XP_004142445.1| PREDICTED: RNA-binding protein Nova-2-like [Cucumis sativus]
gi|449527683|ref|XP_004170839.1| PREDICTED: RNA-binding protein Nova-2-like [Cucumis sativus]
Length = 326
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 81/169 (47%), Gaps = 14/169 (8%)
Query: 47 EEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIA---DILPDSEERIVVISARE 103
E+ + L GS+IGKGGS + FQ+++GA I+++ + P + +RI+++S
Sbjct: 32 EKATYIRFLVSNAAAGSVIGKGGSTINDFQSQSGARIQLSRNHEFFPGTTDRIIMVSGSI 91
Query: 104 NSEMRHSPAQDAVMRVHSRIAEIGFEPGQAV----VARLLVHSQQIGCLLGRGGHIVSEM 159
N ++ A + V+ ++E+ E G V RL+V G ++G+GG +
Sbjct: 92 NEILK---AMELVL--AKLLSELHAEEGDDVEPRTKVRLIVPHSSCGAIIGKGGSTIKSF 146
Query: 160 RRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRE 208
+ A I++ P+D + D +V + G A I S+L E
Sbjct: 147 IEDSQAGIKISPQDNNYMAST--DRLVTLSGTIEEQMRATDLIVSKLSE 193
>gi|321455006|gb|EFX66153.1| hypothetical protein DAPPUDRAFT_2216 [Daphnia pulex]
Length = 388
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 91/210 (43%), Gaps = 45/210 (21%)
Query: 8 YPPAAEPFHQRGYAPGYHSRGYSSGPGHETVGGRNRMFYEEEVVFKLLCHLDKVGSLIGK 67
YPP A P+ Q G A G G + L VG++IG
Sbjct: 211 YPPGAAPYAQAGPA----------GVGETSF---------------LYIPNSAVGAIIGT 245
Query: 68 GGSIVRTFQNETGASIKIADI------LPDSEERIVVISARENSEMRHSPAQDAVMRVHS 121
GS +R +GAS+KI + P +E ++ ++ E A +
Sbjct: 246 RGSHIRNIIRFSGASVKITSLPEGTTAEPQAERKVTIVGTPE-------AQWKAQYLIFE 298
Query: 122 RIAEIGFEP-GQAV--VARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAPRC 178
++ E GF P G+ V LLV S Q+G ++G+GG V EM+R T + I++ +Q
Sbjct: 299 KMREEGFMPAGEDVRLTVELLVASSQVGRIIGKGGQNVREMQRTTSSVIKL--PEQGAST 356
Query: 179 GSPHDEIVQVIGNYHSVQDALFHITSRLRE 208
G + V +IGN+ +VQ A I + + +
Sbjct: 357 G--EETTVHIIGNFFAVQSAQRRIRAMMSQ 384
>gi|224113143|ref|XP_002316405.1| predicted protein [Populus trichocarpa]
gi|222865445|gb|EEF02576.1| predicted protein [Populus trichocarpa]
Length = 334
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 81/160 (50%), Gaps = 8/160 (5%)
Query: 53 KLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIA---DILPDSEERIVVISARENSEMRH 109
+ L GS+IGKGG+ + FQ+++GA I+++ + P + +RI+++S + ++
Sbjct: 38 RFLVSNAAAGSVIGKGGATITDFQSQSGARIQLSRNYEFFPGTSDRIIMVSGGIDDVLK- 96
Query: 110 SPAQDAVMRVHSRI-AEIGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIR 168
+ + ++ S I AE G E + RL+V + G ++G+GG I+ + A I+
Sbjct: 97 -AVELIIAKLLSEIPAEDGDEAEPRMRVRLVVPNSACGSIIGKGGSIIKSFIEESHAGIK 155
Query: 169 VFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRE 208
+ P D + D +V V G A+ I S+L +
Sbjct: 156 ISPLD--TKFFGLTDRLVTVTGTLEEQMHAIDLILSKLTD 193
>gi|390177064|ref|XP_003736269.1| GA30025, isoform C [Drosophila pseudoobscura pseudoobscura]
gi|388858893|gb|EIM52342.1| GA30025, isoform C [Drosophila pseudoobscura pseudoobscura]
Length = 554
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 86/177 (48%), Gaps = 20/177 (11%)
Query: 45 FYEEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIA---DILPDSEERIVVISA 101
F E K+L G++IGKGG + + Q +TGA +K++ D P + ER+ +I+
Sbjct: 45 FCETTYHMKILVPAVASGAIIGKGGETIASLQKDTGARVKMSKSHDFYPGTTERVCLITG 104
Query: 102 RENSEM----------RHSPAQDAVMRVHSRIAEIGFEPGQAVVARLLVHSQQIGCLLGR 151
+ M R P D ++ ++ E + V ++LV + G ++G+
Sbjct: 105 STEAIMVVLDFIMDKIREKP--DLTTKIIDAESKQTQERDKQV--KILVPNSTAGMIIGK 160
Query: 152 GGHIVSEMRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRE 208
GG + +++ +G+ +++ Q P+ S + + +IG+ + ++A I S++ E
Sbjct: 161 GGAFIKQIKEDSGSYVQI---SQKPKDVSLQERCITIIGDKENNKNACKMILSKIVE 214
>gi|195972875|ref|NP_001108030.2| insulin-like growth factor 2 mRNA-binding protein 2 [Danio rerio]
gi|124021198|gb|ABM88867.1| IGF2 mRNA-binding protein 2 [Danio rerio]
Length = 607
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 91/175 (52%), Gaps = 22/175 (12%)
Query: 47 EEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADIL-PDSEERIVVISARENS 105
E+EVV+ L VG++IGK G ++ GASIKIA PD +R+V+I+ +
Sbjct: 433 EQEVVY-LFIPTQAVGAIIGKKGQHIKQLARFAGASIKIAPAESPDVTQRMVIITGPPEA 491
Query: 106 EMRHSPAQDAVMRVHSRIAEIGFEPGQAVVARLLVH----SQQIGCLLGRGGHIVSEMRR 161
+ + A R+ ++ E F + V +L H S G ++G+GG V+E++
Sbjct: 492 QFK------AQGRIFGKLKEENFFTAKEEV-KLETHIKVPSSAAGRVIGKGGKTVNELQN 544
Query: 162 ATGASIRVFPKDQAPRCGSPHDEI-VQVIGNYHSVQDALFHITSRLRETIFPMKR 215
T A + + P+DQ P +DE+ V++ G++ + Q A ++RE I +K+
Sbjct: 545 LTSAEV-IVPRDQTP---DENDEVFVKISGHFFASQTA----QRKIREIIQQVKQ 591
>gi|356552330|ref|XP_003544521.1| PREDICTED: uncharacterized protein LOC100813135 [Glycine max]
Length = 670
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 66/137 (48%), Gaps = 28/137 (20%)
Query: 53 KLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIA---DILPDSEERIVVISARENSEMRH 109
K+ +VG +IGKGG ++ Q ++GA I++ D P+S R V E+
Sbjct: 125 KIDIPNGRVGVIIGKGGETIKYLQLQSGAKIQVTRDMDADPNSATRTV--------ELMG 176
Query: 110 SPAQDAVMRVHSRIAEIGFEP---GQAVVARLL------------VHSQQIGCLLGRGGH 154
SP DA+ I E+ E G ++AR + + + ++G ++G+GG
Sbjct: 177 SP--DAIATAEKLINEVLAEAETGGSGIIARRVAGQAGSDEYVSKIPNNKVGLVIGKGGE 234
Query: 155 IVSEMRRATGASIRVFP 171
+ M+ +TGA I+V P
Sbjct: 235 TIKNMQASTGARIQVIP 251
>gi|344250764|gb|EGW06868.1| Poly(rC)-binding protein 2 [Cricetulus griseus]
Length = 306
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 81/368 (22%), Positives = 143/368 (38%), Gaps = 90/368 (24%)
Query: 57 HLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMRHSPAQDAV 116
H +VGS+I K G V+ + E+GA I+D + ERI+ ++ N+ + A
Sbjct: 2 HGKEVGSIIAKKGESVKKMREESGARTSISD--GNCPERIITLAGPTNAIFK------AF 53
Query: 117 MRVHSRIAEIGFEPGQA---------VVARLLVHSQQIGCLLGRGGHIVSEMRRATGASI 167
+ ++ E G V RL+V + Q G L+G+GG + E+R +TGA +
Sbjct: 54 AMIIDKLEE-GISSSMTNSTAASRPPVALRLVVPASQCGSLIGKGGCKIKEIRESTGAQV 112
Query: 168 RVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKRPGPNNGHSYLPP 227
+V D P + + + + G S+ + + I + ET + +P P+ P
Sbjct: 113 QV-AGDMLP---NSTEWAITIAGIPQSLIECVKQICVVMLET---LSQP-PH-------P 157
Query: 228 FPEMPPPPFRPRHNPASPGSYPSPVGPFHSMDRGMGPSQPFDHQAAFSHGMDPMVPPNSD 287
P+ +RP+ P F+ G D SD
Sbjct: 158 HPKGLTITYRPK---------------------------PSSSLVIFAGGQD-RYSTGSD 189
Query: 288 RIPFPYGSERPGHGPTFDRPPSPRSWTPQGV-----------GGGDPRGFDASSGFTPRN 336
FP+ ++ P + PP + Q G G DAS+
Sbjct: 190 SASFPHTTQSMCLNPDLEGPPLELTKLHQLALQQSHFPMTHGNTGFSAGLDASA------ 243
Query: 337 RPVESGNHAAILTSTTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATEG 396
+T+ E+ I + + G + ++ IRQ+SGA + +P G+T+
Sbjct: 244 ------------QTTSHELTISNDLIGCIIGRQGAKINEIRQMSGAQIKTANPVEGSTDR 291
Query: 397 VVMVSGTS 404
V ++G++
Sbjct: 292 QVTITGSA 299
Score = 42.7 bits (99), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 33/52 (63%), Gaps = 1/52 (1%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIA-DILPDSEERIVVIS 100
V +L+ + GSLIGKGG ++ + TGA +++A D+LP+S E + I+
Sbjct: 79 VALRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTEWAITIA 130
>gi|167614344|gb|ABZ89744.1| IGF-II mRNA-binding protein 2a [Danio rerio]
Length = 607
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 91/175 (52%), Gaps = 22/175 (12%)
Query: 47 EEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADI-LPDSEERIVVISARENS 105
E+EVV+ L VG++IGK G ++ GASIKIA PD +R+V+I+ +
Sbjct: 433 EQEVVY-LFIPTQAVGAIIGKKGQHIKQLARFAGASIKIAPAESPDVTQRMVIITGPPEA 491
Query: 106 EMRHSPAQDAVMRVHSRIAEIGFEPGQAVVARLLVH----SQQIGCLLGRGGHIVSEMRR 161
+ + A R+ ++ E F + V +L H S G ++G+GG V+E++
Sbjct: 492 QFK------AQGRIFGKLKEENFFTAKEEV-KLETHIKVPSSAAGRVIGKGGKTVNELQN 544
Query: 162 ATGASIRVFPKDQAPRCGSPHDEI-VQVIGNYHSVQDALFHITSRLRETIFPMKR 215
T A + + P+DQ P +DE+ V++ G++ + Q A ++RE I +K+
Sbjct: 545 LTSAEV-IVPRDQTP---DENDEVFVKISGHFFASQTA----QRKIREIIQQVKQ 591
>gi|403260495|ref|XP_003922705.1| PREDICTED: poly(rC)-binding protein 1 [Saimiri boliviensis
boliviensis]
Length = 302
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 83/163 (50%), Gaps = 8/163 (4%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMR- 108
+ +LL H +VGS+IGK G V+ + E+GA I I++ + ERI+ ++ N+ +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISE--GNCPERIITLTGPTNAIFKA 71
Query: 109 HSPAQDAVMR-VHSRIAEIGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASI 167
+ D + ++S + V RL+V + Q G L+G+GG + E+R +TGA +
Sbjct: 72 FAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQV 131
Query: 168 RVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETI 210
+V D P + + + + G SV + + I + ET+
Sbjct: 132 QV-AGDMLP---NSTERAITIAGVPQSVTECVKQICLVMLETL 170
>gi|390347463|ref|XP_792931.3| PREDICTED: poly(rC)-binding protein 3-like [Strongylocentrotus
purpuratus]
Length = 369
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 66/288 (22%), Positives = 113/288 (39%), Gaps = 53/288 (18%)
Query: 134 VVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYH 193
V RL+V + Q G L+G+GG + ++R T ASI V + P S + V + G
Sbjct: 18 VSLRLIVPTSQCGSLIGKGGSKIKDIRETTSASITV-ASEMLP---SSTERAVTISGTPE 73
Query: 194 SVQDALFHITSRLRETIFPMKRPGPNNGHSYLPPFPEMPPPPFRPRHNPASPGSYPSPVG 253
++ A++ + + E+ P G + P+RP+ P + P
Sbjct: 74 AITKAIYQVCCVMLES--------PPKGATI----------PYRPK-----PATAPII-- 108
Query: 254 PFHSMDRGMGPSQPFDHQAAFSHGMDPMVPPNSDRIPFPYGSERPGHGPTFDRPPSPRSW 313
F M QA HG + P+ ++
Sbjct: 109 -FAGGSVSMTEQHLHQQQAYAVHGNYALAQPDLTKLHHQLALHH--------------QQ 153
Query: 314 TPQGVGGGDPRGFDASSGFTPRNR---PVESGNHAAILTSTTIEVVIPQLYMAHVYGENN 370
TP + G P A + F + P G +TT E+ IP + V G
Sbjct: 154 TPYAIPGQTPFSPAALTQFAAQTAAPPPQVQGQ------ATTQEITIPNHLIGCVIGRGG 207
Query: 371 SNLSHIRQISGANVVVNDPKPGATEGVVMVSGTSDQMRAAQSLIHAFI 418
+ + IRQ+SGAN+ + + + G+T+ V ++G+ + + AQ LI+ +
Sbjct: 208 TKIQEIRQMSGANIKIANSQEGSTDRSVTITGSPESVAVAQCLINTSL 255
Score = 46.2 bits (108), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 33/52 (63%), Gaps = 1/52 (1%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIA-DILPDSEERIVVIS 100
V +L+ + GSLIGKGGS ++ + T ASI +A ++LP S ER V IS
Sbjct: 18 VSLRLIVPTSQCGSLIGKGGSKIKDIRETTSASITVASEMLPSSTERAVTIS 69
Score = 41.2 bits (95), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 41/77 (53%), Gaps = 5/77 (6%)
Query: 131 GQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAPRCGSPHDEIVQVIG 190
GQA + + + IGC++GRGG + E+R+ +GA+I++ + GS D V + G
Sbjct: 185 GQATTQEITIPNHLIGCVIGRGGTKIQEIRQMSGANIKIANSQE----GS-TDRSVTITG 239
Query: 191 NYHSVQDALFHITSRLR 207
+ SV A I + L
Sbjct: 240 SPESVAVAQCLINTSLE 256
>gi|147794644|emb|CAN66855.1| hypothetical protein VITISV_039970 [Vitis vinifera]
Length = 153
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 59/88 (67%), Gaps = 2/88 (2%)
Query: 42 NRMFYEEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISA 101
R ++V+F+++ ++G +IGK GS ++ + ET A+IKIAD + EER+++IS+
Sbjct: 52 KRRAKNQDVLFRIVVPSRQIGKVIGKEGSRIQKIREETKATIKIADAIARHEERVIIISS 111
Query: 102 RENSEMRHSPAQDAVMRVHSRIAEIGFE 129
+ +SE S A++A+++V S I + GF+
Sbjct: 112 K-DSENVISDAENALLQVASLILK-GFQ 137
>gi|9931476|gb|AAG02185.1| RNA binding protein MCG10 [Homo sapiens]
gi|119585575|gb|EAW65171.1| poly(rC) binding protein 4, isoform CRA_d [Homo sapiens]
gi|119585578|gb|EAW65174.1| poly(rC) binding protein 4, isoform CRA_d [Homo sapiens]
gi|119585579|gb|EAW65175.1| poly(rC) binding protein 4, isoform CRA_d [Homo sapiens]
Length = 369
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 92/214 (42%), Gaps = 61/214 (28%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIA-DILPDSEERIVVISARENS--- 105
V +L+ + GSLIGK G+ ++ + TGA +++A D+LP+S ER V +S ++
Sbjct: 68 VTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQVAGDLLPNSTERAVTVSGVPDAIIL 127
Query: 106 -------EMRHSPAQDAVMRVHSRI------------------------AEI-------- 126
+ SP + A + H + AE+
Sbjct: 128 CVRQICAVILESPPKGATIPYHPSLSLGTVLLSANQGFSVQGQYGAVTPAEVTKLQQLSS 187
Query: 127 ------------GFEPG-QAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKD 173
G +PG Q LV + IGC++GR G +SE+R+ +GA I++ +
Sbjct: 188 HAVPFATPSVVPGLDPGTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKI--GN 245
Query: 174 QAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLR 207
QA G H V + G+ S+ A + IT+ L
Sbjct: 246 QAEGAGERH---VTITGSPVSIALAQYLITACLE 276
Score = 40.8 bits (94), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 36/65 (55%)
Query: 354 EVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATEGVVMVSGTSDQMRAAQSL 413
E ++P + V G S +S IRQ+SGA++ + + GA E V ++G+ + AQ L
Sbjct: 211 EFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQAEGAGERHVTITGSPVSIALAQYL 270
Query: 414 IHAFI 418
I A +
Sbjct: 271 ITACL 275
>gi|195119576|ref|XP_002004307.1| GI19683 [Drosophila mojavensis]
gi|193909375|gb|EDW08242.1| GI19683 [Drosophila mojavensis]
Length = 509
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 85/186 (45%), Gaps = 24/186 (12%)
Query: 41 RNRMFYEEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVIS 100
RNR EE V ++L G++IGKGG ++ + + A++ + D ER + IS
Sbjct: 16 RNRR--NEETV-RILIPSSIAGAVIGKGGQHIQKMRTQYKATVSVDD--SQGPERTIQIS 70
Query: 101 ARENSEMRHSPAQDAVMRVHSRIAEIGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSEMR 160
D+ + + + + + E + RLL+H GC++G+GG + E+R
Sbjct: 71 T----------DIDSTLEIITEMLKYFEERDEEYDVRLLIHQSLAGCVIGKGGQKIKEIR 120
Query: 161 RATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKRPGPNN 220
G + AP+ D +VQ +G V +A+ + + R+T P+K P
Sbjct: 121 DRIGCRFLKVFSNVAPQS---TDRVVQTVGKQSQVIEAVREVITLTRDT--PIKGP---- 171
Query: 221 GHSYLP 226
H+Y P
Sbjct: 172 IHNYDP 177
>gi|194881635|ref|XP_001974928.1| GG22043 [Drosophila erecta]
gi|190658115|gb|EDV55328.1| GG22043 [Drosophila erecta]
Length = 498
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 77/169 (45%), Gaps = 18/169 (10%)
Query: 41 RNRMFYEEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVIS 100
RNR EE V ++L G++IGKGG ++ + + A++ + D ER + IS
Sbjct: 17 RNR--RNEETV-RILIPSSIAGAVIGKGGQHIQKMRTQYKATVSVDD--SQGPERTIQIS 71
Query: 101 ARENSEMRHSPAQDAVMRVHSRIAEIGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSEMR 160
A S + + + + + E + RLL+H GC++G+GG + E+R
Sbjct: 72 ADIES----------TLEIITEMLKYFEERDEDFDVRLLIHQSLAGCVIGKGGQKIKEIR 121
Query: 161 RATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRET 209
G + AP+ D +VQ +G V DA+ + + R+T
Sbjct: 122 DRIGCRFLKVFSNVAPQS---TDRVVQTVGKQSQVIDAVREVITLTRDT 167
>gi|126336339|ref|XP_001367908.1| PREDICTED: poly(rC)-binding protein 4-like isoform 1 [Monodelphis
domestica]
Length = 410
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 71/273 (26%), Positives = 114/273 (41%), Gaps = 64/273 (23%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIA-DILPDSEERIVVISARENS--- 105
V +L+ + GSLIGK G+ ++ + TGA +++A D+LP+S ER V +S ++
Sbjct: 102 VTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQVAGDLLPNSTERAVTVSGVPDAIIL 161
Query: 106 -------EMRHSPAQDAVMRVH------------------------------SRIAEI-- 126
+ SP + A + H S++ ++
Sbjct: 162 CVRQICAVILESPPKGATIPYHPSLSLGTVLLSANQGFSVQGQYGTVTPAEVSKLQQLSG 221
Query: 127 ------------GFEP-GQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKD 173
G +P Q LV + IGC++GR G +SE+R+ +GA I++ +
Sbjct: 222 HPVPFASPSVVPGLDPSAQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKI--GN 279
Query: 174 QAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKRPGPNNGHSYL-PPF-PEM 231
QA G H V + G+ S+ A + IT+ L ET P +G + L PF P +
Sbjct: 280 QAEGSGERH---VTITGSPVSIALAQYLITACL-ETAKSTSGGTPGSGTADLSAPFSPPL 335
Query: 232 PPPPFRPRHNPASPGSYPSPVGPFHSMDRGMGP 264
P P A PG +P S G+ P
Sbjct: 336 APSPALTALPAAPPGLLGTPYAISLSNFIGLKP 368
Score = 47.0 bits (110), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 60/128 (46%), Gaps = 16/128 (12%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMRH 109
+ +++ H +VGS+IGK G V+ + ++ A I I++ ERI I+ +
Sbjct: 18 LTLRMIMHGKEVGSIIGKKGETVKRIREQSSARITISE--GSCPERITTITGSTGAVFH- 74
Query: 110 SPAQDAVMRVHSRIAEI--------GFEPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRR 161
AV + ++ E G V RL++ + Q G L+G+ G + E+R
Sbjct: 75 -----AVSMIAFKLDEDLCTGPPNGGSISKPPVTLRLVIPASQCGSLIGKAGTKIKEIRE 129
Query: 162 ATGASIRV 169
TGA ++V
Sbjct: 130 TTGAQVQV 137
Score = 39.7 bits (91), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 36/65 (55%)
Query: 354 EVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATEGVVMVSGTSDQMRAAQSL 413
E ++P + V G S +S IRQ+SGA++ + + G+ E V ++G+ + AQ L
Sbjct: 245 EFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQAEGSGERHVTITGSPVSIALAQYL 304
Query: 414 IHAFI 418
I A +
Sbjct: 305 ITACL 309
>gi|326378247|gb|ADZ57223.1| neuro-oncological ventral antigen [Branchiostoma lanceolatum]
Length = 508
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 69/142 (48%), Gaps = 28/142 (19%)
Query: 49 EVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIA---DILPDSEERIVVISARENS 105
+++ K+L GS+IGKGG + Q ETGA+IK++ D P + ERIVVI+ E
Sbjct: 65 QLLLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSNDFYPGTTERIVVITGSE-- 122
Query: 106 EMRHSPAQDAVMRVHSRIAE-IGFEP--------------GQAVVARLLVHSQQIGCLLG 150
D++ VH + E IG P +A +++V + G ++G
Sbjct: 123 --------DSLKSVHKFLMEKIGQAPRPPAKSPSEQNANNNRAKQVKIVVPNSTAGLIIG 174
Query: 151 RGGHIVSEMRRATGASIRVFPK 172
+GG + + TG+ +++ K
Sbjct: 175 KGGATIKFIMEQTGSRVQISQK 196
>gi|390177062|ref|XP_003736268.1| GA30025, isoform B [Drosophila pseudoobscura pseudoobscura]
gi|388858892|gb|EIM52341.1| GA30025, isoform B [Drosophila pseudoobscura pseudoobscura]
Length = 714
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 84/170 (49%), Gaps = 20/170 (11%)
Query: 52 FKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIA---DILPDSEERIVVISARENSEM- 107
K+L G++IGKGG + + Q +TGA +K++ D P + ER+ +I+ + M
Sbjct: 244 MKILVPAVASGAIIGKGGETIASLQKDTGARVKMSKSHDFYPGTTERVCLITGSTEAIMV 303
Query: 108 ---------RHSPAQDAVMRVHSRIAEIGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSE 158
R P D ++ ++ E + V ++LV + G ++G+GG + +
Sbjct: 304 VLDFIMDKIREKP--DLTTKIIDAESKQTQERDKQV--KILVPNSTAGMIIGKGGAFIKQ 359
Query: 159 MRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRE 208
++ +G+ +++ Q P+ S + + +IG+ + ++A I S++ E
Sbjct: 360 IKEDSGSYVQI---SQKPKDVSLQERCITIIGDKENNKNACKMILSKIVE 406
>gi|225707620|gb|ACO09656.1| PolyrC-binding protein 2 [Osmerus mordax]
Length = 318
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 86/379 (22%), Positives = 145/379 (38%), Gaps = 98/379 (25%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMRH 109
+ +LL H +VGS+IGK G V+ + E+GA I I++ + ERI+ ++
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISE--GNCPERIITLAG-------- 63
Query: 110 SPAQDAVMRVHSRIAEIGFEPGQA------------VVARLLVHSQQIGCLLGRGGHIVS 157
A+ + S I E E + V R++V + Q G L+G+GG +
Sbjct: 64 --PTTAIFKAFSMIIEKLEEDISSSMTNSTATSKPPVTLRIVVPASQCGSLIGKGGCKIK 121
Query: 158 EMRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKRPG 217
E+R +TGA ++V D P + + + + G S+ + + I + E P
Sbjct: 122 EIRESTGAQVQV-AGDMLP---NSTERAITIAGTPQSIIECVKQICVVMLEQSPPKGVTI 177
Query: 218 PNNGHSYLPPFPEMPPPPFRPRHNPASPGSYPSPVGPFHSMDRGMGPSQPFDHQAAFSHG 277
P P P P F A G + P P HQ A
Sbjct: 178 PYR------PKPSGSPVIFAGGQAYAVQGQHAIP-----------QPDLTKLHQLAMQQS 220
Query: 278 MDPMVPPNSDRIPFPYGSERPGHGPTFDRPPSPRSWTPQGVGGGDPRGFDASSGFTPRNR 337
PFP P+ + +T G DAS+
Sbjct: 221 ------------PFPIA-------------PNNQGFT----------GMDASA------- 238
Query: 338 PVESGNHAAILTSTTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATEGV 397
++ +H + + I +I G S ++ IRQ+SGA + + +P G+ +
Sbjct: 239 --QTSSHEMTIPNDLIGCII---------GRQGSKINEIRQMSGAQIKIANPVDGSADRQ 287
Query: 398 VMVSGTSDQMRAAQSLIHA 416
V ++G+ + A+ LI+A
Sbjct: 288 VTITGSPASISLAEYLINA 306
>gi|195486812|ref|XP_002091665.1| GE12124 [Drosophila yakuba]
gi|194177766|gb|EDW91377.1| GE12124 [Drosophila yakuba]
Length = 497
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 77/169 (45%), Gaps = 18/169 (10%)
Query: 41 RNRMFYEEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVIS 100
RNR EE V ++L G++IGKGG ++ + + A++ + D ER + IS
Sbjct: 17 RNR--RNEETV-RILIPSSIAGAVIGKGGQHIQKMRTQYKATVSVDD--SQGPERTIQIS 71
Query: 101 ARENSEMRHSPAQDAVMRVHSRIAEIGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSEMR 160
A S + + + + + E + RLL+H GC++G+GG + E+R
Sbjct: 72 ADIES----------TLEIITEMLKYFEERDEDFDVRLLIHQSLAGCVIGKGGQKIKEIR 121
Query: 161 RATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRET 209
G + AP+ D +VQ +G V DA+ + + R+T
Sbjct: 122 DRIGCRFLKVFSNVAPQS---TDRVVQTVGKQSQVIDAVREVITLTRDT 167
>gi|307196422|gb|EFN78011.1| Insulin-like growth factor 2 mRNA-binding protein 1 [Harpegnathos
saltator]
Length = 647
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 75/152 (49%), Gaps = 15/152 (9%)
Query: 59 DKVGSLIGKGGSIVRTFQNETGASIKIADILPDS-----EERIVVISARENSEMRHSPAQ 113
+ VG++IG GS +R +GAS+KIA + D ER V I S+ +
Sbjct: 386 NSVGAIIGTKGSHIRNIIRFSGASVKIAPLEQDKPAEQQTERKVTIVGSPESQWK----- 440
Query: 114 DAVMRVHSRIAEIGFEPGQA---VVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVF 170
A + ++ E G+ G + +LV S Q+G ++G+GG V E++R TG+ I+
Sbjct: 441 -AQYLIFEKMREEGYVSGTEDVRLTIEILVPSAQVGRIIGKGGQNVRELQRVTGSVIK-L 498
Query: 171 PKDQAPRCGSPHDEIVQVIGNYHSVQDALFHI 202
+ QA + + V +IG + SVQ A I
Sbjct: 499 SEQQATPPSADEETTVHIIGPFFSVQSAQRRI 530
Score = 43.9 bits (102), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 36/171 (21%), Positives = 74/171 (43%), Gaps = 16/171 (9%)
Query: 52 FKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKI--ADILPDSEERIVVISARENSEMRH 109
++L D VG++IG+ GS +R + A + + D + E+ I + +N
Sbjct: 145 LRILVQSDMVGAIIGRQGSTIRQITQVSRARVDVHRKDNVGSLEKAITIYGNPDNCTNAC 204
Query: 110 SPAQDAVMRVHSRIAEIGFEPGQ-----------AVVARLLVHSQQIGCLLGRGGHIVSE 158
+ VM+ + G++ G + ++L H+ IG ++G+GG+ +
Sbjct: 205 KKILE-VMQQEANNTNKGYDEGSNSDDHGAVNSYEITLKILAHNNLIGRIIGKGGNTIKR 263
Query: 159 MRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRET 209
+ + T I V + + I+ V G ++ A I+S+LR++
Sbjct: 264 IMQDTDTKITVSSINDINSFN--LERIITVKGTIENMSKAESMISSKLRQS 312
Score = 41.2 bits (95), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 39/77 (50%), Gaps = 7/77 (9%)
Query: 26 SRGYSSGPGHETVGGRNRMFYEEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKI 85
++GY G + G N E+ K+L H + +G +IGKGG+ ++ +T I +
Sbjct: 219 NKGYDEGSNSDDHGAVNSY----EITLKILAHNNLIGRIIGKGGNTIKRIMQDTDTKITV 274
Query: 86 A---DILPDSEERIVVI 99
+ DI + ERI+ +
Sbjct: 275 SSINDINSFNLERIITV 291
>gi|427792951|gb|JAA61927.1| Putative rna-binding protein nova1/pasilla, partial [Rhipicephalus
pulchellus]
Length = 448
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 99/228 (43%), Gaps = 52/228 (22%)
Query: 52 FKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIA---DILPDSEERIVVISARENSEMR 108
FK+L G++IGKGG + Q E GA +K++ D P + ER+ +I+
Sbjct: 40 FKILVPAVAAGAIIGKGGETIALLQKEAGARVKMSKSNDFYPGTTERVCLITG------- 92
Query: 109 HSPAQDAVMRVHSRIAE-------------IGFEPGQ----AVVARLLVHSQQIGCLLGR 151
+ + V+R+H I E I F+ Q ++LV + G ++G+
Sbjct: 93 ---SVEGVLRIHEFIMEKIKEKPDPTAKIAIDFDHKQPAEREKQVKILVPNSTAGMIIGK 149
Query: 152 GGHIVSEMRRATGASIRVFPKDQ----APRCGSPHDEIVQVIGNYHSVQDALFHITSRLR 207
GG + +++ +GA +++ K + A RC + VIG + + A I +++
Sbjct: 150 GGSYIKQIKEESGAYVQISQKSKDHALAERC-------ITVIGEMDNNKKACQLILAKIV 202
Query: 208 ETIFPMKRPGPNNGHSYLPPFPEM--PPPPFRPRHNP-ASPGSYPSPV 252
E P +G + E+ P F P +P A+P S S V
Sbjct: 203 ED--------PQSGSCLHVSYAEVTGPVANFNPTGSPYANPSSVHSTV 242
>gi|351697928|gb|EHB00847.1| RNA-binding protein Nova-2 [Heterocephalus glaber]
Length = 320
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 85/196 (43%), Gaps = 38/196 (19%)
Query: 36 ETVGGRNRMFYEE-EVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIA---DILPD 91
ET+ G + EE E K+L GS+IGKGG + Q ETGA+IK++ D P
Sbjct: 11 ETLKGVHVTREEEGEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPG 70
Query: 92 SEERIVVISARENSEMRHSPAQDAVMRVHSRIAE---------------------IGFEP 130
+ ER+ ++ +A+ VHS IAE P
Sbjct: 71 TTERVCLVQG----------TAEALNAVHSFIAEKVREIPQAMTKPEVVNILQPQTTMNP 120
Query: 131 GQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAPRCGSPHDEIVQVIG 190
+A A+L+V + G ++G+GG V + +GA +++ Q P + + +V V G
Sbjct: 121 DRAKQAKLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQL---SQKPEGINLQERVVTVSG 177
Query: 191 NYHSVQDALFHITSRL 206
V A+ I +L
Sbjct: 178 EPEQVHKAVSAIVQKL 193
Score = 43.1 bits (100), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 73/157 (46%), Gaps = 16/157 (10%)
Query: 53 KLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDS---EERIVVISARENSEMRH 109
KL+ G +IGKGG+ V+ ++GA ++++ P+ +ER+V +S E H
Sbjct: 127 KLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQ-KPEGINLQERVVTVSG--EPEQVH 183
Query: 110 SPAQDAVMRVHSRIAEIGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRV 169
V ++ + A+ + + V +G +LG+GG + E + TGA I++
Sbjct: 184 KAVSAIVQKLAAESAK--------ELVEIAVPENLVGAILGKGGKTLVEYQELTGARIQI 235
Query: 170 FPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRL 206
K + + V + G+ + Q A + I+ R+
Sbjct: 236 SKKGEF--LPGTRNRRVTITGSPAATQAAQYLISQRV 270
>gi|158293805|ref|XP_315123.4| AGAP005015-PA [Anopheles gambiae str. PEST]
gi|157016622|gb|EAA10478.5| AGAP005015-PA [Anopheles gambiae str. PEST]
Length = 447
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 90/195 (46%), Gaps = 23/195 (11%)
Query: 43 RMFYEEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISAR 102
RM EE+ V +LL G++IGKGG ++ + E A + + D ER++ I
Sbjct: 50 RMRSEEQEV-RLLIPSKMAGAIIGKGGHNIQKLRTEYQAQVNVGDCT--GPERVLTIGG- 105
Query: 103 ENSEMRHSPAQDAVMRVHSRIAEIGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRA 162
+ E +D VM+ R + +E R+L+H GC++GRGG + E++
Sbjct: 106 -DMETVTKVVKD-VMKHLDRAGDNEYE------LRILIHLSLAGCVIGRGGSKIKEIKDE 157
Query: 163 TGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKRPGPNNGH 222
G +++F + P+ D I QVIG+ L I ++ T P+K P H
Sbjct: 158 IGCRLKIFS-NIPPQ---STDRIAQVIGSEEQCLKTLNEIIKLIKGT--PIKGP----VH 207
Query: 223 SYLP-PFPEMPPPPF 236
+Y P + +M +
Sbjct: 208 NYDPHNYDDMYADEY 222
>gi|74141926|dbj|BAE41029.1| unnamed protein product [Mus musculus]
Length = 278
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 66/124 (53%), Gaps = 8/124 (6%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMRH 109
+ +LL H +VGS+IGK G V+ + E+GA I I++ + ERI+ ++ N+ +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISE--GNCPERIITLAGPTNAIFKA 71
Query: 110 SPAQDAVMRVHSRIAEIGFEPGQA----VVARLLVHSQQIGCLLGRGGHIVSEMRRATGA 165
+ ++ I+ A V RL+V + Q G L+G+GG + E+R +TGA
Sbjct: 72 FAM--IIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGA 129
Query: 166 SIRV 169
++V
Sbjct: 130 QVQV 133
Score = 45.4 bits (106), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 34/52 (65%), Gaps = 1/52 (1%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIA-DILPDSEERIVVIS 100
V +L+ + GSLIGKGG ++ + TGA +++A D+LP+S ER + I+
Sbjct: 98 VTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIA 149
>gi|357615456|gb|EHJ69667.1| putative igf2 mRNA binding protein [Danaus plexippus]
Length = 599
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 81/149 (54%), Gaps = 13/149 (8%)
Query: 59 DKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMRHS-----PAQ 113
+ VG++IG GS +R + AS+KIA P +++++ S E + + AQ
Sbjct: 361 NAVGAIIGTKGSHIRNIIRFSNASVKIA---PLEQDKVIEGSVAAQQERKVTIVGSPEAQ 417
Query: 114 -DAVMRVHSRIAEIGFEPGQA---VVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRV 169
A + ++ E GF G + ++V S Q+G ++G+GG V E++R TG+ I++
Sbjct: 418 WKAQYLIFEKMREEGFMSGSDDVRLTVAIVVASSQVGRIIGKGGQNVRELQRVTGSLIKL 477
Query: 170 FPKDQAPR-CGSPHDEIVQVIGNYHSVQD 197
+ Q P G+ H+ V ++G+++SVQ+
Sbjct: 478 PEQPQPPTAAGNDHETTVHIVGHFYSVQE 506
Score = 43.1 bits (100), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 36/160 (22%), Positives = 75/160 (46%), Gaps = 10/160 (6%)
Query: 52 FKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKI--ADILPDSEERIVVISARENSEMRH 109
+LL D VG++IG+ GS +R ++ A + + D + E+ I + +N
Sbjct: 141 LRLLVQSDMVGAIIGRQGSTIRLITQQSRARVDVHRKDNVGSLEKAITIYGNPDNC---- 196
Query: 110 SPAQDAVMRVHSRIAEIGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRV 169
+ A ++ V + A G+ + ++L H+ IG ++G+GG+ + + + T I V
Sbjct: 197 TNACKRILEVMQQEAN-NTNKGE-ICLKILAHNNLIGRIIGKGGNTIKRIMQETDTKITV 254
Query: 170 FPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRET 209
+ + I+ V G ++ A I+++LR++
Sbjct: 255 SSINDINSFNL--ERIITVKGTIENMAKAESQISAKLRQS 292
>gi|348564372|ref|XP_003467979.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 3-like
[Cavia porcellus]
Length = 741
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 88/168 (52%), Gaps = 16/168 (9%)
Query: 47 EEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADI-LPDSEERIVVISARENS 105
E E V + L VG++IGK G ++ GASIKIA PD++ R+V+I+ +
Sbjct: 566 ETETVHLFIPALS-VGAIIGKQGQHIKQLSRFAGASIKIAPAEAPDAKVRMVIITGPPEA 624
Query: 106 EMRHSPAQDAVMRVHSRIAEIGF-EPGQAVV--ARLLVHSQQIGCLLGRGGHIVSEMRRA 162
+ + A R++ +I E F P + V A + V S G ++G+GG V+E++
Sbjct: 625 QFK------AQGRIYGKIKEENFVSPKEEVKLEAHIRVPSFAAGRVIGKGGKTVNELQNL 678
Query: 163 TGASIRVFPKDQAPRCGSPHDE-IVQVIGNYHSVQDALFHITSRLRET 209
+ A + V P+DQ P +D+ +V++ G++++ Q A I L +
Sbjct: 679 SSAEV-VVPRDQTP---DENDQVVVKITGHFYACQVAQRKIQEILTQV 722
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 87/196 (44%), Gaps = 21/196 (10%)
Query: 52 FKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKI--ADILPDSEERIVVISARENSEMRH 109
+LL VG++IGK G+ +R +T + I + + +E+ I ++S E +
Sbjct: 361 LRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKSITILSTPEGT---- 416
Query: 110 SPAQDAVMRV-HSRIAEIGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIR 168
S A +++ + H +I F + + ++L H+ +G L+G+ G + ++ + T I
Sbjct: 417 SAACKSILEIMHKEAQDIKFT--EEIPLKILAHNNFVGRLIGKEGRNLKKIEQDTDTKIT 474
Query: 169 VFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRET----IFPMKR-----PGPN 219
+ P + + + V G+ + A I ++RE+ I M PG N
Sbjct: 475 ISPLQELTLYNP--ERTITVKGSVETCAKAEEEIMKKIRESYENDIASMNLQAHLIPGLN 532
Query: 220 -NGHSYLPPFPEMPPP 234
N PP MPPP
Sbjct: 533 LNALGLFPPTSGMPPP 548
>gi|444021|emb|CAA82631.1| sub2.3 [Homo sapiens]
Length = 299
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 83/163 (50%), Gaps = 8/163 (4%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMR- 108
+ +LL H +VGS+IGK G V+ + E+GA I I++ + ERI+ ++ N+ +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISE--GNCPERIITLTGPTNAIFKA 71
Query: 109 HSPAQDAVMR-VHSRIAEIGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASI 167
+ D + ++S + V RL+V + Q G L+G+GG + E+R +TGA +
Sbjct: 72 FAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQV 131
Query: 168 RVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETI 210
+V D P + + + + G SV + + I + ET+
Sbjct: 132 QV-AGDMLP---NSTERAITIAGVPQSVTECVKQICLVMLETL 170
>gi|195499424|ref|XP_002096942.1| GE25952 [Drosophila yakuba]
gi|194183043|gb|EDW96654.1| GE25952 [Drosophila yakuba]
Length = 572
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 86/171 (50%), Gaps = 22/171 (12%)
Query: 52 FKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIA---DILPDSEERIVVISARENSEM- 107
K+L G++IGKGG + + Q +TGA +K++ D P + ER+ +I+ + M
Sbjct: 68 MKILVPAVASGAIIGKGGETIASLQKDTGARVKMSKSHDFYPGTTERVCLITGSTEAIMV 127
Query: 108 ---------RHSP-AQDAVMRVHSRIAEIGFEPGQAVVARLLVHSQQIGCLLGRGGHIVS 157
R P + ++ V S+ + E + V ++LV + G ++G+GG +
Sbjct: 128 VLEFIMDKIREKPDLTNKIVDVESKQTQ---ERDKQV--KILVPNSTAGMIIGKGGAFIK 182
Query: 158 EMRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRE 208
+++ +G+ +++ Q P+ S + + +IG+ + ++A I S++ E
Sbjct: 183 QIKEESGSYVQI---SQKPKDVSLQERCITIIGDKENNKNACKMILSKIVE 230
>gi|393909303|gb|EJD75396.1| hypothetical protein LOAG_17442 [Loa loa]
Length = 585
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 59/263 (22%), Positives = 115/263 (43%), Gaps = 33/263 (12%)
Query: 47 EEEVV-FKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIA---DILPDSEERIVVISAR 102
E+ +V K+L VG+LIGKGG +R ++E+G ++++ ++ P + ERI ++ +
Sbjct: 52 EDNIVQVKVLIPSAAVGALIGKGGETMRNLKSESGCRLQMSKNQEVYPGTNERICLVKGK 111
Query: 103 ENSEMRHSPAQDAVM-RVHSRI-----AEI----GFEPGQAVVARLLVHSQQIGCLLGRG 152
S ++ S D ++ ++ ++ ++I G E + +L+V + G ++G+
Sbjct: 112 IASVLKVS---DVILEKIREKVDNNTPSDIFDHKGMERKNEM--KLVVPNTSAGMVIGKS 166
Query: 153 GHIVSEMRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFP 212
G + E+R TGA+I+V+PK + + I+ + V L R+ E +
Sbjct: 167 GARIKEIREQTGANIQVYPKAGSQEAKVSQERIITIAAEQDEV---LMDALQRVLEKVA- 222
Query: 213 MKRPGPNNGHSYLPPFPEMPPPPFRPRHNPASPGSYPSPVGPFHSMDR-------GMGPS 265
P + + +P + P + G + PF +R G P+
Sbjct: 223 ---ADPQHAMATIPDHKDDSFGPASGLLHGIGGGVQGQTIQPFDFSNRSQNAPQFGGAPA 279
Query: 266 QPFDHQAAFSHGMDPMVPPNSDR 288
+H SH + PN R
Sbjct: 280 VQQNHFGQISHAAAQVWQPNQQR 302
>gi|335299138|ref|XP_003358505.1| PREDICTED: poly(rC)-binding protein 4-like isoform 1 [Sus scrofa]
Length = 403
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 64/247 (25%), Positives = 104/247 (42%), Gaps = 67/247 (27%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIA-DILPDSEERIVVISARENS--- 105
V +L+ + GSLIGK G+ ++ + TGA +++A D+LP+S ER V +S ++
Sbjct: 102 VTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQVAGDLLPNSTERAVTVSGVPDAIIL 161
Query: 106 -------EMRHSPAQDAVMRVHSRI------------------------AEI-------- 126
+ SP + A + H + AE+
Sbjct: 162 CVRQICAVILESPPKGATIPYHPSLSLGTVLLSTNQGFSVQGQYGAVTPAEVTKLQQLSG 221
Query: 127 ------------GFEPG-QAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKD 173
G +PG Q LV + IGC++GR G +SE+R+ +GA I++ +
Sbjct: 222 HAVPFASPSMVPGLDPGTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKI--GN 279
Query: 174 QAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKRPGPNNGHSYL-----PPF 228
QA G H V + G+ S+ A + IT+ L ET P++ + L PP
Sbjct: 280 QAEGAGERH---VTITGSPVSIALAQYLITACL-ETAKSTSGGTPSSAPTDLPAPFSPPL 335
Query: 229 PEMPPPP 235
+P P
Sbjct: 336 TALPTAP 342
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 62/124 (50%), Gaps = 8/124 (6%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMRH 109
+ ++L H +VGS+IGK G V+ + ++ A I I++ ERI I+ + + H
Sbjct: 18 LTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISE--GSCPERITTITG-STAAVFH 74
Query: 110 SPAQDAVMRVHSRIAEIGFEPGQA----VVARLLVHSQQIGCLLGRGGHIVSEMRRATGA 165
+ + A ++ + G V RL++ + Q G L+G+ G + E+R TGA
Sbjct: 75 AVSMIA-FKLDEDLCAAPANGGNVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRETTGA 133
Query: 166 SIRV 169
++V
Sbjct: 134 QVQV 137
Score = 40.8 bits (94), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 36/65 (55%)
Query: 354 EVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATEGVVMVSGTSDQMRAAQSL 413
E ++P + V G S +S IRQ+SGA++ + + GA E V ++G+ + AQ L
Sbjct: 245 EFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQAEGAGERHVTITGSPVSIALAQYL 304
Query: 414 IHAFI 418
I A +
Sbjct: 305 ITACL 309
>gi|322792902|gb|EFZ16735.1| hypothetical protein SINV_14612 [Solenopsis invicta]
Length = 555
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 75/152 (49%), Gaps = 15/152 (9%)
Query: 59 DKVGSLIGKGGSIVRTFQNETGASIKIADILPDS-----EERIVVISARENSEMRHSPAQ 113
+ VG++IG GS +R +GAS+KIA + D ER V I S+ +
Sbjct: 339 NSVGAIIGTKGSHIRNIIRFSGASVKIAPLEQDKPAEQQTERKVTIVGSPESQWK----- 393
Query: 114 DAVMRVHSRIAEIGFEPGQA---VVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVF 170
A + ++ E G+ G + +LV S Q+G ++G+GG V E++R TG+ I+
Sbjct: 394 -AQYLIFEKMREEGYVAGTEDVRLTIEILVPSTQVGRIIGKGGQNVRELQRVTGSVIK-L 451
Query: 171 PKDQAPRCGSPHDEIVQVIGNYHSVQDALFHI 202
+ QA + + V +IG + SVQ A I
Sbjct: 452 SEQQATPPSAEEETTVHIIGPFFSVQSAQRRI 483
Score = 45.8 bits (107), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 37/160 (23%), Positives = 75/160 (46%), Gaps = 10/160 (6%)
Query: 52 FKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKI--ADILPDSEERIVVISARENSEMRH 109
++L D VG++IG+ G+ +R T A + + D + E+ I + EN
Sbjct: 114 LRILVQSDMVGAIIGRQGTTIRQITQLTRARVDVHRKDNVGSLEKAITIYGNPENC---- 169
Query: 110 SPAQDAVMRVHSRIAEIGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRV 169
+ A ++ V + A G+ + ++L H+ IG ++G+GG+ + + + T I V
Sbjct: 170 TNACKKILEVMQQEAN-NTNKGE-ITLKILAHNNLIGRIIGKGGNTIKRIMQDTDTKITV 227
Query: 170 FPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRET 209
+ + I+ V G+ ++ A I+S+LR++
Sbjct: 228 SSINDINSFN--LERIITVKGSIDNMSKAESMISSKLRQS 265
>gi|392894107|ref|NP_497351.3| Protein PES-4 [Caenorhabditis elegans]
gi|373220643|emb|CCD73932.1| Protein PES-4 [Caenorhabditis elegans]
Length = 432
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 67/125 (53%), Gaps = 13/125 (10%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISAR-----EN 104
+ +LL +VGS+IGK G ++ + E+GA I I+D ERIV I+ +
Sbjct: 72 LTIRLLMQGKEVGSIIGKKGDQIKKIREESGAKINISD--GSCPERIVTITGTLGVIGKA 129
Query: 105 SEMRHSPAQDAVMRVHSRIAEIGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATG 164
M + ++ ++ + + + P + R++V + Q G L+G+GG + ++R ATG
Sbjct: 130 FNMVCNKFEEDMLLLPNSV------PKPPITMRVIVPATQCGSLIGKGGSKIKDIREATG 183
Query: 165 ASIRV 169
ASI+V
Sbjct: 184 ASIQV 188
Score = 46.6 bits (109), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 44/81 (54%), Gaps = 11/81 (13%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIA-DILPDSEERIVVISARENSEMR 108
+ +++ + GSLIGKGGS ++ + TGASI++A ++LP S ER V +S
Sbjct: 153 ITMRVIVPATQCGSLIGKGGSKIKDIREATGASIQVASEMLPHSTERAVTLSGTA----- 207
Query: 109 HSPAQDAVMRVHSRIAEIGFE 129
DA+ +++ +I E
Sbjct: 208 -----DAINLCMTQVCQILLE 223
Score = 37.7 bits (86), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 19/69 (27%), Positives = 38/69 (55%), Gaps = 1/69 (1%)
Query: 352 TIEVVIPQLYMAHVYGENNSNLSHIRQISGANV-VVNDPKPGATEGVVMVSGTSDQMRAA 410
T+ V++P + G+ S + IR+ +GA++ V ++ P +TE V +SGT+D +
Sbjct: 154 TMRVIVPATQCGSLIGKGGSKIKDIREATGASIQVASEMLPHSTERAVTLSGTADAINLC 213
Query: 411 QSLIHAFIL 419
+ + +L
Sbjct: 214 MTQVCQILL 222
>gi|424512903|emb|CCO66487.1| predicted protein [Bathycoccus prasinos]
Length = 565
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 65/128 (50%), Gaps = 4/128 (3%)
Query: 45 FYEEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADI-LPDSEERIVVISARE 103
YEE KL C VG +IGKGG ++ + TGA + I + + D E R +VI+
Sbjct: 297 VYEETRTVKLDCPQSLVGKIIGKGGETIKGLASTTGAKVIIDQMSMADGEPRKIVITGTN 356
Query: 104 NSEMRHSPAQDAVMRV-HSRIAEI-GFEPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRR 161
+ S + +M H ++ + +PG A+V + + +G ++GRGG + ++
Sbjct: 357 TQIEKVSKMCEDIMNGPHGTVSAVQAAQPG-AIVVNVECPKECVGRVIGRGGETIKGIQL 415
Query: 162 ATGASIRV 169
ATGA ++
Sbjct: 416 ATGARAQI 423
>gi|332025247|gb|EGI65421.1| Insulin-like growth factor 2 mRNA-binding protein 1 [Acromyrmex
echinatior]
Length = 568
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 74/148 (50%), Gaps = 15/148 (10%)
Query: 59 DKVGSLIGKGGSIVRTFQNETGASIKIADILPDS-----EERIVVISARENSEMRHSPAQ 113
+ VG++IG GS +R +GAS+KIA + D ER V I S+ +
Sbjct: 348 NSVGAIIGTKGSHIRNIIRFSGASVKIAPLEQDKPAEQQTERKVTIVGSPESQWK----- 402
Query: 114 DAVMRVHSRIAEIGFEPGQA---VVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVF 170
A + ++ E G+ G + +LV S Q+G ++G+GG V E++R TG+ I+
Sbjct: 403 -AQYLIFEKMREEGYVAGTEDVRLTIEILVPSTQVGRIIGKGGQNVRELQRVTGSVIK-L 460
Query: 171 PKDQAPRCGSPHDEIVQVIGNYHSVQDA 198
+ QA + + V +IG + SVQ A
Sbjct: 461 SEQQATPPSAEEETTVHIIGPFFSVQSA 488
Score = 46.6 bits (109), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 38/160 (23%), Positives = 75/160 (46%), Gaps = 10/160 (6%)
Query: 52 FKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKI--ADILPDSEERIVVISARENSEMRH 109
++L D VG++IG+ GS +R T A + + D + E+ I + EN
Sbjct: 123 LRILVQSDMVGAIIGRQGSTIRQITQMTRARVDVHRKDNVGSLEKAITIYGNPENC---- 178
Query: 110 SPAQDAVMRVHSRIAEIGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRV 169
+ A ++ V + A G+ + ++L H+ IG ++G+GG+ + + + T I V
Sbjct: 179 TNACKKILEVMQQEAN-NTNKGE-ITLKILAHNNLIGRIIGKGGNTIKRIMQDTDTKITV 236
Query: 170 FPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRET 209
+ + I+ V G+ ++ A I+S+LR++
Sbjct: 237 SSINDINSFN--LERIITVKGSIDNMSKAESMISSKLRQS 274
>gi|194741910|ref|XP_001953430.1| GF17214 [Drosophila ananassae]
gi|190626489|gb|EDV42013.1| GF17214 [Drosophila ananassae]
Length = 532
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 84/170 (49%), Gaps = 20/170 (11%)
Query: 52 FKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIA---DILPDSEERIVVISARENSEM- 107
K+L G++IGKGG + + Q +TGA +K++ D P + ER+ +I+ + M
Sbjct: 68 MKILVPAVASGAIIGKGGETIASLQKDTGARVKMSKSHDFYPGTTERVCLITGSTEAIMF 127
Query: 108 ---------RHSPAQDAVMRVHSRIAEIGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSE 158
R P D ++ ++ E + V ++LV + G ++G+GG + +
Sbjct: 128 VLDFIMDKIREKP--DLTTKIIDAESKQTQERDKQV--KILVPNSTAGMIIGKGGAFIKQ 183
Query: 159 MRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRE 208
++ +G+ +++ Q P+ S + + +IG+ + ++A I S++ E
Sbjct: 184 IKEESGSYVQI---SQKPKDVSLQERCITIIGDKENNKNACKMILSKIVE 230
>gi|432101641|gb|ELK29690.1| RNA-binding protein Nova-2 [Myotis davidii]
Length = 294
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 81/191 (42%), Gaps = 37/191 (19%)
Query: 40 GRNRMFYEEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIA---DILPDSEERI 96
G R E E K+L GS+IGKGG + Q ETGA+IK++ D P + ER+
Sbjct: 31 GCARNAEEGEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERV 90
Query: 97 VVISARENSEMRHSPAQDAVMRVHSRIAE---------------------IGFEPGQAVV 135
++ +A+ VHS IAE P +A
Sbjct: 91 CLVQG----------TAEALNAVHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQ 140
Query: 136 ARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSV 195
A+L+V + G ++G+GG V + +GA +++ Q P + + +V V G V
Sbjct: 141 AKLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQL---SQKPEGINLQERVVTVSGEPEQV 197
Query: 196 QDALFHITSRL 206
A+ I +L
Sbjct: 198 HKAVSAIVQKL 208
Score = 42.4 bits (98), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 62/125 (49%), Gaps = 14/125 (11%)
Query: 53 KLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDS---EERIVVISARENSEMRH 109
KL+ G +IGKGG+ V+ ++GA ++++ P+ +ER+V +S E H
Sbjct: 142 KLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQ-KPEGINLQERVVTVSG--EPEQVH 198
Query: 110 SPAQDAVMRVHSRIAEIGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRV 169
V + + ++ E + +V + V +G +LG+GG + E + TGA I++
Sbjct: 199 KA-------VSAIVQKLAAESAKELV-EIAVPENLVGAILGKGGKTLVEYQELTGARIQI 250
Query: 170 FPKDQ 174
K +
Sbjct: 251 SKKGE 255
>gi|417410720|gb|JAA51826.1| Putative polyc-binding alphacp-1, partial [Desmodus rotundus]
Length = 440
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 92/214 (42%), Gaps = 61/214 (28%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIA-DILPDSEERIVVISA------- 101
V +L+ + GSLIGK G+ ++ + TGA +++A D+LP+S ER V +S
Sbjct: 139 VTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQVAGDLLPNSTERAVTVSGVPDAIIL 198
Query: 102 ---RENSEMRHSPAQDAVMRVHSRI------------------------AEI-------- 126
+ + + SP + A + H + AE+
Sbjct: 199 CVRQICAVILESPPKGATIPYHPSLSLGTVLLSANQGFSVQGQYGAVTPAEVTKLQQLSG 258
Query: 127 ------------GFEPG-QAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKD 173
G +PG Q LV + IGC++GR G +SE+R+ +GA I++ +
Sbjct: 259 HAVPFASPSMVPGLDPGAQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKI--GN 316
Query: 174 QAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLR 207
QA G H V + G+ S+ A + IT+ L
Sbjct: 317 QAEGAGERH---VTITGSPVSIALAQYLITACLE 347
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 61/124 (49%), Gaps = 8/124 (6%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMRH 109
+ ++L +VGS+IGK G V+ + ++ A I I++ ERI I+ + + H
Sbjct: 55 LTLRMLMQGKEVGSIIGKKGETVKRIREQSSARITISE--GSCPERITTITG-STAAVFH 111
Query: 110 SPAQDAVMRVHSRIAEIGFEPGQA----VVARLLVHSQQIGCLLGRGGHIVSEMRRATGA 165
+ + A ++ + G V RL++ + Q G L+G+ G + E+R TGA
Sbjct: 112 AVSMIA-FKLDEDLCSAPANGGTVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRETTGA 170
Query: 166 SIRV 169
++V
Sbjct: 171 QVQV 174
Score = 40.8 bits (94), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 36/65 (55%)
Query: 354 EVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATEGVVMVSGTSDQMRAAQSL 413
E ++P + V G S +S IRQ+SGA++ + + GA E V ++G+ + AQ L
Sbjct: 282 EFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQAEGAGERHVTITGSPVSIALAQYL 341
Query: 414 IHAFI 418
I A +
Sbjct: 342 ITACL 346
>gi|307213191|gb|EFN88688.1| RNA-binding protein Nova-1 [Harpegnathos saltator]
Length = 514
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 41/178 (23%), Positives = 84/178 (47%), Gaps = 34/178 (19%)
Query: 52 FKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIA---DILPDSEERIVVISARENSEMR 108
K+L G++IGKGG + Q +TGA +K++ D P + ER+ +I+
Sbjct: 47 LKVLVPGVAAGAIIGKGGDTIAQLQKDTGARVKMSKSHDFYPGTTERVCLITG------- 99
Query: 109 HSPAQDAVMRVHSRIAE-------------IGFEPGQAVVAR-----LLVHSQQIGCLLG 150
+ +A+M V I E + F+ G+A R +LV + G ++G
Sbjct: 100 ---SVEAIMAVMDFIMEKIREKPDLTSKTTVDFDSGKATAERDKQVKILVPNSTAGMIIG 156
Query: 151 RGGHIVSEMRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRE 208
+ G+ + +++ +G+ +++ Q + S + + VIG + ++AL I +++ +
Sbjct: 157 KAGNYIKQIKEESGSYVQI---SQKAKDLSLQERCITVIGEKENNRNALLMILAKVAD 211
>gi|326674258|ref|XP_003200102.1| PREDICTED: RNA-binding protein Nova-1 isoform 2 [Danio rerio]
Length = 517
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 82/189 (43%), Gaps = 38/189 (20%)
Query: 45 FYEE-EVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIA---DILPDSEERIVVIS 100
F+EE E K+L GS+IGKGG + Q ETGA+IK++ D P + ER+ +I
Sbjct: 72 FHEEGEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQ 131
Query: 101 ARENSEMRHSPAQDAVMRVHSRIAE---------------------IGFEPGQAVVARLL 139
+A+ VH IAE P + A+L+
Sbjct: 132 G----------TVEALNNVHDFIAEKVREMPQSAQKTEPVSILQPQTTVNPDRVKQAKLI 181
Query: 140 VHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDAL 199
V + G ++G+GG V + +GA +++ Q P + + +V + G + A+
Sbjct: 182 VPNSTAGLIIGKGGATVKAVMEQSGAWVQL---SQKPDGINLQERVVTISGEPEQNRKAV 238
Query: 200 FHITSRLRE 208
I +++E
Sbjct: 239 EIIVQKIQE 247
>gi|432092458|gb|ELK25073.1| Poly(rC)-binding protein 4 [Myotis davidii]
Length = 403
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 64/247 (25%), Positives = 104/247 (42%), Gaps = 67/247 (27%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIA-DILPDSEERIVVISA------- 101
V +L+ + GSLIGK G+ ++ + TGA +++A D+LP+S ER V +S
Sbjct: 102 VTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQVAGDLLPNSTERAVTVSGVPDAIIL 161
Query: 102 ---RENSEMRHSPAQDAVMRVHSRI------------------------AEI-------- 126
+ + + SP + A + H + AE+
Sbjct: 162 CVRQICAVILESPPKGATIPYHPSLSLGTVLLSANQGFSVQSQYGGVTPAEVTKLQQLSG 221
Query: 127 ------------GFEPG-QAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKD 173
G +PG Q LV + IGC++GR G +SE+R+ +GA I++ +
Sbjct: 222 HAVPFGSPSMVPGLDPGAQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKI--GN 279
Query: 174 QAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKRPGPNNGHSYL-----PPF 228
QA G H V + G+ S+ A + IT+ L ET P++ + L PP
Sbjct: 280 QAEGAGERH---VTITGSPVSIALAQYLITACL-ETAKSTSGGTPSSAPADLSTPFSPPL 335
Query: 229 PEMPPPP 235
+P P
Sbjct: 336 TALPTAP 342
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 62/124 (50%), Gaps = 8/124 (6%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMRH 109
+ ++L H +VGS+IGK G V+ + ++ A I I++ ERI I+ + + H
Sbjct: 18 LTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISE--GSCPERITTITG-STAAVFH 74
Query: 110 SPAQDAVMRVHSRIAEIGFEPGQA----VVARLLVHSQQIGCLLGRGGHIVSEMRRATGA 165
+ + A ++ + G V RL++ + Q G L+G+ G + E+R TGA
Sbjct: 75 AVSMIA-FKLDEDLCSAPANGGTVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRETTGA 133
Query: 166 SIRV 169
++V
Sbjct: 134 QVQV 137
Score = 40.8 bits (94), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 36/65 (55%)
Query: 354 EVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATEGVVMVSGTSDQMRAAQSL 413
E ++P + V G S +S IRQ+SGA++ + + GA E V ++G+ + AQ L
Sbjct: 245 EFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQAEGAGERHVTITGSPVSIALAQYL 304
Query: 414 IHAFI 418
I A +
Sbjct: 305 ITACL 309
>gi|296225349|ref|XP_002758447.1| PREDICTED: poly(rC)-binding protein 4 isoform 1 [Callithrix
jacchus]
gi|296225353|ref|XP_002758449.1| PREDICTED: poly(rC)-binding protein 4 isoform 3 [Callithrix
jacchus]
gi|297671175|ref|XP_002813714.1| PREDICTED: poly(rC)-binding protein 4 isoform 2 [Pongo abelii]
gi|297671177|ref|XP_002813715.1| PREDICTED: poly(rC)-binding protein 4 isoform 3 [Pongo abelii]
gi|395733705|ref|XP_003776278.1| PREDICTED: poly(rC)-binding protein 4 [Pongo abelii]
Length = 403
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 64/247 (25%), Positives = 104/247 (42%), Gaps = 67/247 (27%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIA-DILPDSEERIVVISARENS--- 105
V +L+ + GSLIGK G+ ++ + TGA +++A D+LP+S ER V +S ++
Sbjct: 102 VTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQVAGDLLPNSTERAVTVSGVPDAIIL 161
Query: 106 -------EMRHSPAQDAVMRVHSRI------------------------AEI-------- 126
+ SP + A + H + AE+
Sbjct: 162 CVRQICAVILESPPKGATIPYHPSLSLGTVLLSANQGFSVQGQYGAVTPAEVTKLQQLSS 221
Query: 127 ------------GFEPG-QAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKD 173
G +PG Q LV + IGC++GR G +SE+R+ +GA I++ +
Sbjct: 222 HAVPFATPSVVPGLDPGTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKI--GN 279
Query: 174 QAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKRPGPNNGHSYL-----PPF 228
QA G H V + G+ S+ A + IT+ L ET P++ + L PP
Sbjct: 280 QAEGAGERH---VTITGSPVSIALAQYLITACL-ETAKSTSGGTPSSAPADLPAPFSPPL 335
Query: 229 PEMPPPP 235
+P P
Sbjct: 336 TALPTAP 342
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 62/124 (50%), Gaps = 8/124 (6%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMRH 109
+ ++L H +VGS+IGK G V+ + ++ A I I++ ERI I+ + + H
Sbjct: 18 LTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISE--GSCPERITTITG-STAAVFH 74
Query: 110 SPAQDAVMRVHSRIAEIGFEPGQA----VVARLLVHSQQIGCLLGRGGHIVSEMRRATGA 165
+ + A ++ + G V RL++ + Q G L+G+ G + E+R TGA
Sbjct: 75 AVSMIA-FKLDEDLCAAPANGGNVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRETTGA 133
Query: 166 SIRV 169
++V
Sbjct: 134 QVQV 137
Score = 40.8 bits (94), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 36/65 (55%)
Query: 354 EVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATEGVVMVSGTSDQMRAAQSL 413
E ++P + V G S +S IRQ+SGA++ + + GA E V ++G+ + AQ L
Sbjct: 245 EFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQAEGAGERHVTITGSPVSIALAQYL 304
Query: 414 IHAFI 418
I A +
Sbjct: 305 ITACL 309
>gi|14670369|ref|NP_127501.1| poly(rC)-binding protein 4 isoform c [Homo sapiens]
gi|14670373|ref|NP_127503.1| poly(rC)-binding protein 4 isoform c [Homo sapiens]
gi|291575148|ref|NP_001167571.1| poly(rC)-binding protein 4 isoform c [Homo sapiens]
gi|114587184|ref|XP_001170982.1| PREDICTED: poly(rC)-binding protein 4 isoform 12 [Pan troglodytes]
gi|114587188|ref|XP_001171026.1| PREDICTED: poly(rC)-binding protein 4 isoform 14 [Pan troglodytes]
gi|410037040|ref|XP_003950173.1| PREDICTED: poly(rC)-binding protein 4 [Pan troglodytes]
gi|12230429|sp|P57723.1|PCBP4_HUMAN RecName: Full=Poly(rC)-binding protein 4; AltName: Full=Alpha-CP4
gi|9957167|gb|AAG09241.1|AF176330_1 alphaCP-4 [Homo sapiens]
gi|10436225|dbj|BAB14761.1| unnamed protein product [Homo sapiens]
gi|12804299|gb|AAH03008.1| Poly(rC) binding protein 4 [Homo sapiens]
gi|13278756|gb|AAH04153.1| Poly(rC) binding protein 4 [Homo sapiens]
gi|119585571|gb|EAW65167.1| poly(rC) binding protein 4, isoform CRA_c [Homo sapiens]
gi|119585572|gb|EAW65168.1| poly(rC) binding protein 4, isoform CRA_c [Homo sapiens]
gi|119585573|gb|EAW65169.1| poly(rC) binding protein 4, isoform CRA_c [Homo sapiens]
gi|119585576|gb|EAW65172.1| poly(rC) binding protein 4, isoform CRA_c [Homo sapiens]
gi|119585577|gb|EAW65173.1| poly(rC) binding protein 4, isoform CRA_c [Homo sapiens]
gi|261861404|dbj|BAI47224.1| poly(rC) binding protein 4 [synthetic construct]
gi|410227440|gb|JAA10939.1| poly(rC) binding protein 4 [Pan troglodytes]
gi|410227442|gb|JAA10940.1| poly(rC) binding protein 4 [Pan troglodytes]
gi|410227444|gb|JAA10941.1| poly(rC) binding protein 4 [Pan troglodytes]
gi|410262892|gb|JAA19412.1| poly(rC) binding protein 4 [Pan troglodytes]
gi|410262894|gb|JAA19413.1| poly(rC) binding protein 4 [Pan troglodytes]
gi|410262896|gb|JAA19414.1| poly(rC) binding protein 4 [Pan troglodytes]
gi|410301312|gb|JAA29256.1| poly(rC) binding protein 4 [Pan troglodytes]
gi|410301314|gb|JAA29257.1| poly(rC) binding protein 4 [Pan troglodytes]
gi|410350315|gb|JAA41761.1| poly(rC) binding protein 4 [Pan troglodytes]
gi|410350319|gb|JAA41763.1| poly(rC) binding protein 4 [Pan troglodytes]
gi|410350321|gb|JAA41764.1| poly(rC) binding protein 4 [Pan troglodytes]
Length = 403
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 64/247 (25%), Positives = 104/247 (42%), Gaps = 67/247 (27%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIA-DILPDSEERIVVISARENS--- 105
V +L+ + GSLIGK G+ ++ + TGA +++A D+LP+S ER V +S ++
Sbjct: 102 VTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQVAGDLLPNSTERAVTVSGVPDAIIL 161
Query: 106 -------EMRHSPAQDAVMRVHSRI------------------------AEI-------- 126
+ SP + A + H + AE+
Sbjct: 162 CVRQICAVILESPPKGATIPYHPSLSLGTVLLSANQGFSVQGQYGAVTPAEVTKLQQLSS 221
Query: 127 ------------GFEPG-QAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKD 173
G +PG Q LV + IGC++GR G +SE+R+ +GA I++ +
Sbjct: 222 HAVPFATPSVVPGLDPGTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKI--GN 279
Query: 174 QAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKRPGPNNGHSYL-----PPF 228
QA G H V + G+ S+ A + IT+ L ET P++ + L PP
Sbjct: 280 QAEGAGERH---VTITGSPVSIALAQYLITACL-ETAKSTSGGTPSSAPADLPAPFSPPL 335
Query: 229 PEMPPPP 235
+P P
Sbjct: 336 TALPTAP 342
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 62/124 (50%), Gaps = 8/124 (6%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMRH 109
+ ++L H +VGS+IGK G V+ + ++ A I I++ ERI I+ + + H
Sbjct: 18 LTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISE--GSCPERITTITG-STAAVFH 74
Query: 110 SPAQDAVMRVHSRIAEIGFEPGQA----VVARLLVHSQQIGCLLGRGGHIVSEMRRATGA 165
+ + A ++ + G V RL++ + Q G L+G+ G + E+R TGA
Sbjct: 75 AVSMIA-FKLDEDLCAAPANGGNVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRETTGA 133
Query: 166 SIRV 169
++V
Sbjct: 134 QVQV 137
Score = 40.8 bits (94), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 36/65 (55%)
Query: 354 EVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATEGVVMVSGTSDQMRAAQSL 413
E ++P + V G S +S IRQ+SGA++ + + GA E V ++G+ + AQ L
Sbjct: 245 EFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQAEGAGERHVTITGSPVSIALAQYL 304
Query: 414 IHAFI 418
I A +
Sbjct: 305 ITACL 309
>gi|397495989|ref|XP_003818826.1| PREDICTED: poly(rC)-binding protein 4 isoform 1 [Pan paniscus]
gi|397495991|ref|XP_003818827.1| PREDICTED: poly(rC)-binding protein 4 isoform 2 [Pan paniscus]
Length = 403
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 64/247 (25%), Positives = 104/247 (42%), Gaps = 67/247 (27%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIA-DILPDSEERIVVISARENS--- 105
V +L+ + GSLIGK G+ ++ + TGA +++A D+LP+S ER V +S ++
Sbjct: 102 VTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQVAGDLLPNSTERAVTVSGVPDAIIL 161
Query: 106 -------EMRHSPAQDAVMRVHSRI------------------------AEI-------- 126
+ SP + A + H + AE+
Sbjct: 162 CVRQICAVILESPPKGATIPYHPSLSLGTVLLSANQGFSVQGQYGAVTPAEVTKLQQLSS 221
Query: 127 ------------GFEPG-QAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKD 173
G +PG Q LV + IGC++GR G +SE+R+ +GA I++ +
Sbjct: 222 HAVPFATPSMVPGLDPGTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKI--GN 279
Query: 174 QAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKRPGPNNGHSYL-----PPF 228
QA G H V + G+ S+ A + IT+ L ET P++ + L PP
Sbjct: 280 QAEGAGERH---VTITGSPVSIALAQYLITACL-ETAKSTSGGTPSSAPADLPAPFSPPL 335
Query: 229 PEMPPPP 235
+P P
Sbjct: 336 TALPTAP 342
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 62/124 (50%), Gaps = 8/124 (6%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMRH 109
+ ++L H +VGS+IGK G V+ + ++ A I I++ ERI I+ + + H
Sbjct: 18 LTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISE--GSCPERITTITG-STAAVFH 74
Query: 110 SPAQDAVMRVHSRIAEIGFEPGQA----VVARLLVHSQQIGCLLGRGGHIVSEMRRATGA 165
+ + A ++ + G V RL++ + Q G L+G+ G + E+R TGA
Sbjct: 75 AVSMIA-FKLDEDLCAAPANGGNVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRETTGA 133
Query: 166 SIRV 169
++V
Sbjct: 134 QVQV 137
Score = 40.8 bits (94), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 36/65 (55%)
Query: 354 EVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATEGVVMVSGTSDQMRAAQSL 413
E ++P + V G S +S IRQ+SGA++ + + GA E V ++G+ + AQ L
Sbjct: 245 EFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQAEGAGERHVTITGSPVSIALAQYL 304
Query: 414 IHAFI 418
I A +
Sbjct: 305 ITACL 309
>gi|354484186|ref|XP_003504271.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2-like
isoform 2 [Cricetulus griseus]
Length = 487
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 82/157 (52%), Gaps = 13/157 (8%)
Query: 46 YEEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADIL-PDSEERIVVISAREN 104
Y E+ L VG++IGK G+ ++ GASIKIA PD ER+V+I+
Sbjct: 312 YPEQETVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITGPPE 371
Query: 105 SEMRHSPAQDAVMRVHSRIAEIG-FEPGQAVV--ARLLVHSQQIGCLLGRGGHIVSEMRR 161
++ + A R+ ++ E F P + V A + V S G ++G+GG V+E++
Sbjct: 372 AQFK------AQGRIFGKLKEENFFNPKEEVKLEAHIRVPSSTAGRVIGKGGKTVNELQN 425
Query: 162 ATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDA 198
T A + + P+DQ P + + IV++IG++ + Q A
Sbjct: 426 LTSAEV-IVPRDQTPDENA--EVIVRIIGHFFASQTA 459
Score = 45.1 bits (105), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 70/155 (45%), Gaps = 32/155 (20%)
Query: 48 EEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADI----LPDSEERIVV---IS 100
EEV K+L H VG LIGK G ++ ++ETG I I+ + + + E I V I
Sbjct: 204 EEVPLKILAHNGLVGRLIGKEGRNLKKIEHETGTKITISSLQDLSIYNPERTITVKGTID 263
Query: 101 ARENSEMR-----HSPAQDAVMRVHSRIAEIGFEPG-----------------QAVVARL 138
A N+EM ++ ++ V+S G+ P + L
Sbjct: 264 ACANAEMEIMKKLREAFENDMLAVNSH---SGYFPNMYPHHHFGPFPHHHSYPEQETVNL 320
Query: 139 LVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKD 173
+ +Q +G ++G+ G + ++ R GASI++ P +
Sbjct: 321 FIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAE 355
>gi|308460519|ref|XP_003092563.1| CRE-PES-4 protein [Caenorhabditis remanei]
gi|308253083|gb|EFO97035.1| CRE-PES-4 protein [Caenorhabditis remanei]
Length = 436
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 67/125 (53%), Gaps = 13/125 (10%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISAR-----EN 104
+ +LL +VGS+IGK G ++ + E+GA I I+D ERIV I+ +
Sbjct: 73 LTIRLLMQGKEVGSIIGKKGDQIKKIREESGAKINISD--GSCPERIVTITGTLGVIGKA 130
Query: 105 SEMRHSPAQDAVMRVHSRIAEIGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATG 164
M + ++ ++ + + + P + R++V + Q G L+G+GG + ++R ATG
Sbjct: 131 FNMVCNKFEEDMLLLPNSV------PKPPITMRVIVPATQCGSLIGKGGSKIKDIREATG 184
Query: 165 ASIRV 169
ASI+V
Sbjct: 185 ASIQV 189
Score = 46.2 bits (108), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 44/81 (54%), Gaps = 11/81 (13%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIA-DILPDSEERIVVISARENSEMR 108
+ +++ + GSLIGKGGS ++ + TGASI++A ++LP S ER V +S
Sbjct: 154 ITMRVIVPATQCGSLIGKGGSKIKDIREATGASIQVASEMLPHSTERAVTLSGTA----- 208
Query: 109 HSPAQDAVMRVHSRIAEIGFE 129
DA+ +++ +I E
Sbjct: 209 -----DAINLCMTQVCQILLE 224
>gi|390177070|ref|XP_003736272.1| GA30025, isoform F [Drosophila pseudoobscura pseudoobscura]
gi|388858896|gb|EIM52345.1| GA30025, isoform F [Drosophila pseudoobscura pseudoobscura]
Length = 800
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 84/170 (49%), Gaps = 20/170 (11%)
Query: 52 FKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIA---DILPDSEERIVVISARENSEM- 107
K+L G++IGKGG + + Q +TGA +K++ D P + ER+ +I+ + M
Sbjct: 266 MKILVPAVASGAIIGKGGETIASLQKDTGARVKMSKSHDFYPGTTERVCLITGSTEAIMV 325
Query: 108 ---------RHSPAQDAVMRVHSRIAEIGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSE 158
R P D ++ ++ E + V ++LV + G ++G+GG + +
Sbjct: 326 VLDFIMDKIREKP--DLTTKIIDAESKQTQERDKQV--KILVPNSTAGMIIGKGGAFIKQ 381
Query: 159 MRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRE 208
++ +G+ +++ Q P+ S + + +IG+ + ++A I S++ E
Sbjct: 382 IKEDSGSYVQI---SQKPKDVSLQERCITIIGDKENNKNACKMILSKIVE 428
>gi|395832731|ref|XP_003789409.1| PREDICTED: poly(rC)-binding protein 4 [Otolemur garnettii]
Length = 403
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 92/214 (42%), Gaps = 61/214 (28%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIA-DILPDSEERIVVISARENS--- 105
V +L+ + GSLIGK G+ ++ + TGA +++A D+LP+S ER V +S ++
Sbjct: 102 VTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQVAGDLLPNSTERAVTVSGVPDAIIL 161
Query: 106 -------EMRHSPAQDAVMRVHSRI------------------------AEI-------- 126
+ SP + A + H + AE+
Sbjct: 162 CVRQICAVILESPPKGATIPYHPSLSLGTVLLSANQGFSVQGQYGAVTPAEVTKLQQLSG 221
Query: 127 ------------GFEPG-QAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKD 173
G +PG Q LV + IGC++GR G +SE+R+ +GA I++ +
Sbjct: 222 HAVPFASPSVVPGLDPGTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKI--GN 279
Query: 174 QAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLR 207
QA G H V + G+ S+ A + IT+ L
Sbjct: 280 QAEGAGERH---VTITGSPVSIALAQYLITACLE 310
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 62/124 (50%), Gaps = 8/124 (6%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMRH 109
+ ++L H +VGS+IGK G V+ + ++ A I I++ ERI I+ + + H
Sbjct: 18 LTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISE--GSCPERITTITG-STAAVFH 74
Query: 110 SPAQDAVMRVHSRIAEIGFEPGQA----VVARLLVHSQQIGCLLGRGGHIVSEMRRATGA 165
+ + A ++ + G V RL++ + Q G L+G+ G + E+R TGA
Sbjct: 75 AVSMIA-FKLDEDLCAAPANGGNVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRETTGA 133
Query: 166 SIRV 169
++V
Sbjct: 134 QVQV 137
Score = 40.8 bits (94), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 36/65 (55%)
Query: 354 EVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATEGVVMVSGTSDQMRAAQSL 413
E ++P + V G S +S IRQ+SGA++ + + GA E V ++G+ + AQ L
Sbjct: 245 EFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQAEGAGERHVTITGSPVSIALAQYL 304
Query: 414 IHAFI 418
I A +
Sbjct: 305 ITACL 309
>gi|73985377|ref|XP_849987.1| PREDICTED: poly(rC)-binding protein 4 isoform 2 [Canis lupus
familiaris]
gi|301767222|ref|XP_002919000.1| PREDICTED: poly(rC)-binding protein 4-like isoform 1 [Ailuropoda
melanoleuca]
Length = 403
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 92/214 (42%), Gaps = 61/214 (28%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIA-DILPDSEERIVVISARENS--- 105
V +L+ + GSLIGK G+ ++ + TGA +++A D+LP+S ER V +S ++
Sbjct: 102 VTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQVAGDLLPNSTERAVTVSGVPDAIIL 161
Query: 106 -------EMRHSPAQDAVMRVHSRI------------------------AEI-------- 126
+ SP + A + H + AE+
Sbjct: 162 CVRQICAVILESPPKGATIPYHPSLSLGTVLLSANQGFSVQGQYGAVTPAEVTKLQQLSG 221
Query: 127 ------------GFEPG-QAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKD 173
G +PG Q LV + IGC++GR G +SE+R+ +GA I++ +
Sbjct: 222 HAVPFASPSMVPGLDPGAQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKI--GN 279
Query: 174 QAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLR 207
QA G H V + G+ S+ A + IT+ L
Sbjct: 280 QAEGAGERH---VTITGSPVSIALAQYLITACLE 310
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 62/124 (50%), Gaps = 8/124 (6%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMRH 109
+ ++L H +VGS+IGK G V+ + ++ A I I++ ERI I+ + + H
Sbjct: 18 LTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISE--GSCPERITTITG-STAAVFH 74
Query: 110 SPAQDAVMRVHSRIAEIGFEPGQA----VVARLLVHSQQIGCLLGRGGHIVSEMRRATGA 165
+ + A ++ + G V RL++ + Q G L+G+ G + E+R TGA
Sbjct: 75 AVSMIA-FKLDEDLCAAPANGGNVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRETTGA 133
Query: 166 SIRV 169
++V
Sbjct: 134 QVQV 137
Score = 40.8 bits (94), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 36/65 (55%)
Query: 354 EVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATEGVVMVSGTSDQMRAAQSL 413
E ++P + V G S +S IRQ+SGA++ + + GA E V ++G+ + AQ L
Sbjct: 245 EFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQAEGAGERHVTITGSPVSIALAQYL 304
Query: 414 IHAFI 418
I A +
Sbjct: 305 ITACL 309
>gi|51472291|gb|AAU04539.1| neurological oncogenic ventral antigen protein [Danio rerio]
Length = 473
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 82/189 (43%), Gaps = 38/189 (20%)
Query: 45 FYEE-EVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIA---DILPDSEERIVVIS 100
F+EE E K+L GS+IGKGG + Q ETGA+IK++ D P + ER+ +I
Sbjct: 57 FHEEGEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQ 116
Query: 101 ARENSEMRHSPAQDAVMRVHSRIAE---------------------IGFEPGQAVVARLL 139
+A+ VH IAE P + A+L+
Sbjct: 117 G----------TVEALNNVHDFIAEKVREMPQSAQKTEPVSILQPQTTVNPDRVKQAKLV 166
Query: 140 VHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDAL 199
V + G ++G+GG V + +GA +++ Q P + + +V + G + A+
Sbjct: 167 VPNSTAGLIIGKGGATVKAVMEQSGAWVQL---SQKPDGINLQERVVTISGEPEQNRKAV 223
Query: 200 FHITSRLRE 208
I +++E
Sbjct: 224 EIIVQKIQE 232
>gi|126314788|ref|XP_001377551.1| PREDICTED: insulin-like growth factor 2 mRNA binding protein 2,
partial [Monodelphis domestica]
Length = 504
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 87/168 (51%), Gaps = 18/168 (10%)
Query: 47 EEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADIL-PDSEERIVVISARENS 105
E+EVV+ L VG++IGK G ++ ASIKIA PD ER+V+I+ +
Sbjct: 326 EQEVVY-LFIPTQAVGAIIGKKGHHIKQLARFARASIKIAPAEGPDVGERMVIITGPPEA 384
Query: 106 EMRHSPAQDAVMRVHSRIAEIG-FEPGQAV--VARLLVHSQQIGCLLGRGGHIVSEMRRA 162
+ + A R+ ++ E F P + V A + V S G ++G+GG V+E++
Sbjct: 385 QFK------AQGRIFGKLKEENFFNPKEEVKLKAHIRVPSSAAGRVIGKGGKTVNELQNL 438
Query: 163 TGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETI 210
T A + + P+DQ P + IV++IG++ + Q A ++RE +
Sbjct: 439 TSAEV-IVPRDQTP--DENEEVIVKIIGHFFASQTA----QRKIREIV 479
Score = 38.1 bits (87), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 36/159 (22%), Positives = 74/159 (46%), Gaps = 9/159 (5%)
Query: 52 FKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKI--ADILPDSEERIVVISARENSEMRH 109
++L VG++IGK G ++ +T + + I + SE+ + + ++ E S
Sbjct: 97 LRILVPTQFVGAIIGKEGLTIKNLTKQTQSKVDIHRKENAGASEKPVTIHASPEGS---- 152
Query: 110 SPAQDAVMRVHSRIAEIGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRV 169
S A ++ + + A+ + + V ++L H+ +G L+G+ G + ++ + TG I +
Sbjct: 153 SEACRRILEIMQKEAD-ETKAVEEVPLKILAHNSLVGRLIGKEGRNLKKIEQDTGTKITI 211
Query: 170 FPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRE 208
P Q +P + + V G + A I +LRE
Sbjct: 212 SPL-QDLTIYNP-ERTITVKGTIEACSSAEVEIMRKLRE 248
>gi|410951299|ref|XP_003982335.1| PREDICTED: poly(rC)-binding protein 4 isoform 1 [Felis catus]
Length = 403
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 92/214 (42%), Gaps = 61/214 (28%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIA-DILPDSEERIVVISARENS--- 105
V +L+ + GSLIGK G+ ++ + TGA +++A D+LP+S ER V +S ++
Sbjct: 102 VTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQVAGDLLPNSTERAVTVSGVPDAIIL 161
Query: 106 -------EMRHSPAQDAVMRVHSRI------------------------AEI-------- 126
+ SP + A + H + AE+
Sbjct: 162 CVRQICAVILESPPKGATIPYHPSLSLGTVLLSANQGFSVQGQYGAVTPAEVTKLQQLSG 221
Query: 127 ------------GFEPG-QAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKD 173
G +PG Q LV + IGC++GR G +SE+R+ +GA I++ +
Sbjct: 222 HAVPFASPSMVPGLDPGTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKI--GN 279
Query: 174 QAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLR 207
QA G H V + G+ S+ A + IT+ L
Sbjct: 280 QAEGAGERH---VTITGSPVSIALAQYLITACLE 310
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 62/124 (50%), Gaps = 8/124 (6%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMRH 109
+ ++L H +VGS+IGK G V+ + ++ A I I++ ERI I+ + + H
Sbjct: 18 LTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISE--GSCPERITTITG-STAAVFH 74
Query: 110 SPAQDAVMRVHSRIAEIGFEPGQA----VVARLLVHSQQIGCLLGRGGHIVSEMRRATGA 165
+ + A ++ + G V RL++ + Q G L+G+ G + E+R TGA
Sbjct: 75 AVSMIA-FKLDEDLCAAPANGGNVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRETTGA 133
Query: 166 SIRV 169
++V
Sbjct: 134 QVQV 137
Score = 40.8 bits (94), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 36/65 (55%)
Query: 354 EVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATEGVVMVSGTSDQMRAAQSL 413
E ++P + V G S +S IRQ+SGA++ + + GA E V ++G+ + AQ L
Sbjct: 245 EFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQAEGAGERHVTITGSPVSIALAQYL 304
Query: 414 IHAFI 418
I A +
Sbjct: 305 ITACL 309
>gi|449667206|ref|XP_002160219.2| PREDICTED: heterogeneous nuclear ribonucleoprotein K-like [Hydra
magnipapillata]
Length = 393
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 88/186 (47%), Gaps = 26/186 (13%)
Query: 39 GGRNRMFYEEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVV 98
GG + + V + L G +IGKGG ++ ++E A++ + D +S ER++
Sbjct: 16 GGGAKKMRGDSVTLRFLLMSKHAGGIIGKGGQTIKRLRSEYSATVNVPD--SNSSERVLS 73
Query: 99 ISARENSEMR---------HSPAQDAVMRVHSRIAEIGFEPGQAVVARLLVHSQQIGCLL 149
I+A + + ++ H P V S+ + FE LVHS Q+G ++
Sbjct: 74 IAASQENAIKILCECLPLFHEPPYQ-VSGGGSQNQKNEFE------VDFLVHSSQVGGII 126
Query: 150 GRGGHIVSEMRRATGASIRVFPKDQAPRCG-SPHDEIVQVIGNYHSVQDALFHITSRLRE 208
GR G + E+R T A+++VF + C + + +V + G + DAL I ++E
Sbjct: 127 GRSGFKIKELREQTNANVKVFQE-----CLPNSTERVVALGGGEAEIVDALKKILEIMQE 181
Query: 209 TIFPMK 214
+ P+K
Sbjct: 182 S--PIK 185
Score = 46.6 bits (109), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 36/67 (53%)
Query: 352 TIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATEGVVMVSGTSDQMRAAQ 411
T +V IP + G + +IRQ SGA++ + DP G + V+ ++GT DQ++ Q
Sbjct: 316 TTQVTIPNDLAGAIIGRGGERIRNIRQRSGADIKIQDPGEGKNDRVITITGTQDQIQYGQ 375
Query: 412 SLIHAFI 418
L+ +
Sbjct: 376 FLMQQSV 382
>gi|355709446|gb|AES03594.1| Poly rC-binding protein 1 [Mustela putorius furo]
Length = 209
Score = 57.8 bits (138), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 83/163 (50%), Gaps = 8/163 (4%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMR- 108
+ +LL H +VGS+IGK G V+ + E+GA I I++ + ERI+ ++ N+ +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISE--GNCPERIITLTGPTNAIFKA 71
Query: 109 HSPAQDAVMR-VHSRIAEIGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASI 167
+ D + ++S + V RL+V + Q G L+G+GG + E+R +TGA +
Sbjct: 72 FAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQV 131
Query: 168 RVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETI 210
+V D P + + + + G SV + + I + ET+
Sbjct: 132 QV-AGDMLP---NSTERAITIAGVPQSVTECVKQICLVMLETL 170
>gi|291393785|ref|XP_002713277.1| PREDICTED: poly(rC) binding protein 4 [Oryctolagus cuniculus]
Length = 403
Score = 57.8 bits (138), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 92/214 (42%), Gaps = 61/214 (28%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIA-DILPDSEERIVVISA------- 101
V +L+ + GSLIGK G+ ++ + TGA +++A D+LP+S ER V +S
Sbjct: 102 VTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQVAGDLLPNSTERAVTVSGVPDAIIL 161
Query: 102 ---RENSEMRHSPAQDAVMRVHSRI------------------------AEI-------- 126
+ + + SP + A + H + AE+
Sbjct: 162 CVRQICAVILESPPKGATIPYHPSLSLGTVLLSANQGFPVQGQYGAVTPAEVTKLQQLSG 221
Query: 127 ------------GFEPG-QAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKD 173
G +PG Q LV + IGC++GR G +SE+R+ +GA I++ +
Sbjct: 222 HAVPFASPSVVPGLDPGTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKI--GN 279
Query: 174 QAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLR 207
QA G H V + G+ S+ A + IT+ L
Sbjct: 280 QAEGAGERH---VTITGSPVSIALAQYLITACLE 310
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 62/124 (50%), Gaps = 8/124 (6%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMRH 109
+ ++L H +VGS+IGK G V+ + ++ A I I++ ERI I+ + + H
Sbjct: 18 LTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISE--GSCPERITTITG-STAAVFH 74
Query: 110 SPAQDAVMRVHSRIAEIGFEPGQA----VVARLLVHSQQIGCLLGRGGHIVSEMRRATGA 165
+ + A ++ + G V RL++ + Q G L+G+ G + E+R TGA
Sbjct: 75 AVSMIA-FKLDEDLCAAPANGGNVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRETTGA 133
Query: 166 SIRV 169
++V
Sbjct: 134 QVQV 137
Score = 40.8 bits (94), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 36/65 (55%)
Query: 354 EVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATEGVVMVSGTSDQMRAAQSL 413
E ++P + V G S +S IRQ+SGA++ + + GA E V ++G+ + AQ L
Sbjct: 245 EFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQAEGAGERHVTITGSPVSIALAQYL 304
Query: 414 IHAFI 418
I A +
Sbjct: 305 ITACL 309
>gi|386780909|ref|NP_001247796.1| poly(rC)-binding protein 4 [Macaca mulatta]
gi|332216103|ref|XP_003257183.1| PREDICTED: poly(rC)-binding protein 4 isoform 1 [Nomascus
leucogenys]
gi|332216105|ref|XP_003257184.1| PREDICTED: poly(rC)-binding protein 4 isoform 2 [Nomascus
leucogenys]
gi|332216107|ref|XP_003257185.1| PREDICTED: poly(rC)-binding protein 4 isoform 3 [Nomascus
leucogenys]
gi|402859923|ref|XP_003894386.1| PREDICTED: poly(rC)-binding protein 4 isoform 1 [Papio anubis]
gi|402859925|ref|XP_003894387.1| PREDICTED: poly(rC)-binding protein 4 isoform 2 [Papio anubis]
gi|402859927|ref|XP_003894388.1| PREDICTED: poly(rC)-binding protein 4 isoform 3 [Papio anubis]
gi|403291118|ref|XP_003936646.1| PREDICTED: poly(rC)-binding protein 4 isoform 1 [Saimiri
boliviensis boliviensis]
gi|403291120|ref|XP_003936647.1| PREDICTED: poly(rC)-binding protein 4 isoform 2 [Saimiri
boliviensis boliviensis]
gi|355559585|gb|EHH16313.1| hypothetical protein EGK_11579 [Macaca mulatta]
gi|355746662|gb|EHH51276.1| hypothetical protein EGM_10621 [Macaca fascicularis]
gi|380788331|gb|AFE66041.1| poly(rC)-binding protein 4 isoform c [Macaca mulatta]
gi|380788333|gb|AFE66042.1| poly(rC)-binding protein 4 isoform c [Macaca mulatta]
gi|383414707|gb|AFH30567.1| poly(rC)-binding protein 4 isoform c [Macaca mulatta]
gi|384943104|gb|AFI35157.1| poly(rC)-binding protein 4 isoform c [Macaca mulatta]
Length = 403
Score = 57.8 bits (138), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 92/214 (42%), Gaps = 61/214 (28%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIA-DILPDSEERIVVISARENS--- 105
V +L+ + GSLIGK G+ ++ + TGA +++A D+LP+S ER V +S ++
Sbjct: 102 VTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQVAGDLLPNSTERAVTVSGVPDAIIL 161
Query: 106 -------EMRHSPAQDAVMRVHSRI------------------------AEI-------- 126
+ SP + A + H + AE+
Sbjct: 162 CVRQICAVILESPPKGATIPYHPSLSLGTVLLSANQGFSVQGQYGAVTPAEVTKLQQLSS 221
Query: 127 ------------GFEPG-QAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKD 173
G +PG Q LV + IGC++GR G +SE+R+ +GA I++ +
Sbjct: 222 HAVPFATPSVVPGLDPGTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKI--GN 279
Query: 174 QAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLR 207
QA G H V + G+ S+ A + IT+ L
Sbjct: 280 QAEGAGERH---VTITGSPVSIALAQYLITACLE 310
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 62/124 (50%), Gaps = 8/124 (6%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMRH 109
+ ++L H +VGS+IGK G V+ + ++ A I I++ ERI I+ + + H
Sbjct: 18 LTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISE--GSCPERITTITG-STAAVFH 74
Query: 110 SPAQDAVMRVHSRIAEIGFEPGQA----VVARLLVHSQQIGCLLGRGGHIVSEMRRATGA 165
+ + A ++ + G V RL++ + Q G L+G+ G + E+R TGA
Sbjct: 75 AVSMIA-FKLDEDLCAAPANGGNVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRETTGA 133
Query: 166 SIRV 169
++V
Sbjct: 134 QVQV 137
Score = 40.8 bits (94), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 36/65 (55%)
Query: 354 EVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATEGVVMVSGTSDQMRAAQSL 413
E ++P + V G S +S IRQ+SGA++ + + GA E V ++G+ + AQ L
Sbjct: 245 EFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQAEGAGERHVTITGSPVSIALAQYL 304
Query: 414 IHAFI 418
I A +
Sbjct: 305 ITACL 309
>gi|223947885|gb|ACN28026.1| unknown [Zea mays]
gi|224031081|gb|ACN34616.1| unknown [Zea mays]
gi|413921492|gb|AFW61424.1| hypothetical protein ZEAMMB73_181287 [Zea mays]
Length = 706
Score = 57.8 bits (138), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 80/179 (44%), Gaps = 23/179 (12%)
Query: 48 EEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKI---ADILPDSEERIVVISAREN 104
+E+ + +VG LIGK G +R Q +GA I+I AD ++ R V +
Sbjct: 152 QEISRMIEVPNSRVGVLIGKAGETIRNLQMSSGAKIQITKDADADSNALTRPVELVGTLG 211
Query: 105 SEMRHSPAQDAVMRVHSRIAEIGFEPGQAVVAR-------------LLVHSQQIGCLLGR 151
S + A + + S IAE A++AR + V ++G ++G+
Sbjct: 212 SVDK------AELLIKSVIAEAEAGGSPALIARGFGSGQPGSEQFEMTVPDNKVGLIIGK 265
Query: 152 GGHIVSEMRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETI 210
GG + M+ +GA I++ P+ P + + IV+V GN ++ A I + +T
Sbjct: 266 GGDAIKGMQTKSGARIQLIPQ-HPPEGVTLTERIVRVTGNKKQIELAKDLIKQAMNQTF 323
>gi|147903491|ref|NP_001091320.1| poly(rC) binding protein 1 [Xenopus laevis]
gi|124481736|gb|AAI33216.1| LOC100037147 protein [Xenopus laevis]
Length = 221
Score = 57.8 bits (138), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 66/133 (49%), Gaps = 26/133 (19%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMRH 109
+ +LL H +VGS+IGK G V+ + E+GA I I++ + ERIV I+
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE--GNCPERIVTITG-------- 63
Query: 110 SPAQDAVMRVHSRIAEIGFEPGQA-------------VVARLLVHSQQIGCLLGRGGHIV 156
DA+ + + IA FE V RL+V + Q G L+G+GG +
Sbjct: 64 --PTDAIFKAFAMIA-YKFEEDIINSMSNSTATSKPPVTLRLVVPASQCGSLIGKGGSKI 120
Query: 157 SEMRRATGASIRV 169
E+R +TG+ ++V
Sbjct: 121 KEIRESTGSQVQV 133
Score = 46.6 bits (109), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 44/81 (54%), Gaps = 11/81 (13%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIA-DILPDSEERIVVISARENSEMR 108
V +L+ + GSLIGKGGS ++ + TG+ +++A D+LP+S ER V IS
Sbjct: 98 VTLRLVVPASQCGSLIGKGGSKIKEIRESTGSQVQVAGDMLPNSTERAVTISG------- 150
Query: 109 HSPAQDAVMRVHSRIAEIGFE 129
DA+++ +I + E
Sbjct: 151 ---TPDAIIQCVKQICVVMLE 168
>gi|356576359|ref|XP_003556300.1| PREDICTED: RNA-binding protein Nova-1-like [Glycine max]
Length = 337
Score = 57.8 bits (138), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 82/170 (48%), Gaps = 16/170 (9%)
Query: 47 EEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIA---DILPDSEERIVVISARE 103
E+ + L GS+IGKGGS + FQ+++GA I+++ + P + +RI+++S
Sbjct: 33 EKPTYIRFLVSNSAAGSVIGKGGSTITDFQSQSGARIQLSRNHEFFPGTTDRIIMVSGAI 92
Query: 104 NSEMRHSPAQDAVMRVHSR-IAEIGFEPGQ----AVVARLLVHSQQIGCLLGRGGHIVSE 158
N Q AV + S+ ++E+ E RL+V + G ++G+GG +
Sbjct: 93 N------EIQRAVELILSKLLSELHSEDDNDAEPKTKVRLVVPNGSCGGIIGKGGVTIRS 146
Query: 159 MRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRE 208
+ A I++ P+D +D +V + G + A+ I S+L E
Sbjct: 147 FIEDSQAGIKISPQDN--NYYGQNDRLVMLTGTFDEQMRAIELIVSKLAE 194
>gi|255583738|ref|XP_002532622.1| Far upstream element-binding protein, putative [Ricinus communis]
gi|223527642|gb|EEF29753.1| Far upstream element-binding protein, putative [Ricinus communis]
Length = 314
Score = 57.8 bits (138), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 82/169 (48%), Gaps = 14/169 (8%)
Query: 47 EEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIA---DILPDSEERIVVISARE 103
E+ + L GS+IGKGG+ + FQ+++GA I+++ + P + +RI++IS
Sbjct: 33 EKPTYVRFLVSNAAAGSVIGKGGATITDFQSQSGARIQLSRNYEFFPGTSDRIILISGIL 92
Query: 104 NSEMRHSPAQDAVMRVHSRIAEIGFEPGQAV----VARLLVHSQQIGCLLGRGGHIVSEM 159
+ ++ + + ++E+ E G V RL+V + G ++G+GG I+
Sbjct: 93 DDVLKGVE-----LVLAKLLSELHTEDGDDVDPRTKVRLVVPNSSCGSIIGKGGSIIKSF 147
Query: 160 RRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRE 208
+ A I++ P+D +D +V V G A+ I S+L +
Sbjct: 148 IEESQAGIKISPQDN--NFYGLNDRLVTVTGTLEEQMRAIDLILSKLYD 194
>gi|195330414|ref|XP_002031899.1| GM23807 [Drosophila sechellia]
gi|194120842|gb|EDW42885.1| GM23807 [Drosophila sechellia]
Length = 572
Score = 57.8 bits (138), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 86/171 (50%), Gaps = 22/171 (12%)
Query: 52 FKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIA---DILPDSEERIVVISARENSEM- 107
K+L G++IGKGG + + Q +TGA +K++ D P + ER+ +I+ + M
Sbjct: 68 MKILVPAVASGAIIGKGGETIASLQKDTGARVKMSKSHDFYPGTTERVCLITGSTEAIMV 127
Query: 108 ---------RHSP-AQDAVMRVHSRIAEIGFEPGQAVVARLLVHSQQIGCLLGRGGHIVS 157
R P + ++ V S+ + E + V ++LV + G ++G+GG +
Sbjct: 128 VMEFIMDKIREKPDLTNKIVDVESKQTQ---ERDRQV--KILVPNSTAGMIIGKGGAFIK 182
Query: 158 EMRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRE 208
+++ +G+ +++ Q P+ S + + +IG+ + ++A I S++ E
Sbjct: 183 QIKEESGSYVQI---SQKPKDVSLQERCITIIGDKENNKNACKMILSKIVE 230
>gi|149728835|ref|XP_001494599.1| PREDICTED: poly(rC)-binding protein 4-like isoform 1 [Equus
caballus]
Length = 403
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 92/214 (42%), Gaps = 61/214 (28%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIA-DILPDSEERIVVISA------- 101
V +L+ + GSLIGK G+ ++ + TGA +++A D+LP+S ER V +S
Sbjct: 102 VTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQVAGDLLPNSTERAVTVSGVPDAIIL 161
Query: 102 ---RENSEMRHSPAQDAVMRVHSRI------------------------AEI-------- 126
+ + + SP + A + H + AE+
Sbjct: 162 CVRQICAVILESPPKGATIPYHPSLSLGTVLLSANQGFSVQGQYGAVTSAEVTKLQQLSG 221
Query: 127 ------------GFEPG-QAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKD 173
G +PG Q LV + IGC++GR G +SE+R+ +GA I++ +
Sbjct: 222 HAVPFASPSMVPGLDPGAQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKI--GN 279
Query: 174 QAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLR 207
QA G H V + G+ S+ A + IT+ L
Sbjct: 280 QAEGAGERH---VTITGSPVSIALAQYLITACLE 310
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 62/124 (50%), Gaps = 8/124 (6%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMRH 109
+ ++L H +VGS+IGK G V+ + ++ A I I++ ERI I+ + + H
Sbjct: 18 LTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISE--GSCPERITTITG-STAAVFH 74
Query: 110 SPAQDAVMRVHSRIAEIGFEPGQA----VVARLLVHSQQIGCLLGRGGHIVSEMRRATGA 165
+ + A ++ + G V RL++ + Q G L+G+ G + E+R TGA
Sbjct: 75 AVSMIA-FKLDEDLCAAPTNGGSVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRETTGA 133
Query: 166 SIRV 169
++V
Sbjct: 134 QVQV 137
Score = 40.8 bits (94), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 36/65 (55%)
Query: 354 EVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATEGVVMVSGTSDQMRAAQSL 413
E ++P + V G S +S IRQ+SGA++ + + GA E V ++G+ + AQ L
Sbjct: 245 EFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQAEGAGERHVTITGSPVSIALAQYL 304
Query: 414 IHAFI 418
I A +
Sbjct: 305 ITACL 309
>gi|34364924|emb|CAE45883.1| hypothetical protein [Homo sapiens]
Length = 198
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 88/168 (52%), Gaps = 16/168 (9%)
Query: 47 EEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADI-LPDSEERIVVISARENS 105
E E V + L VG++IGK G ++ GASIKIA PD++ R+V+I+ +
Sbjct: 23 ETETVHLFIPALS-VGAIIGKQGQHIKQLSRFAGASIKIAPAEAPDAKVRMVIITGPPEA 81
Query: 106 EMRHSPAQDAVMRVHSRIAEIGF-EPGQAVV--ARLLVHSQQIGCLLGRGGHIVSEMRRA 162
+ + A R++ +I E F P + V A + V S G ++G+GG V+E++
Sbjct: 82 QFK------AQGRIYGKIKEENFVSPKEEVKLEAHIRVPSFAAGRVIGKGGKTVNELQNL 135
Query: 163 TGASIRVFPKDQAPRCGSPHDE-IVQVIGNYHSVQDALFHITSRLRET 209
+ A + V P+DQ P +D+ +V++ G++++ Q A I L +
Sbjct: 136 SSAEV-VVPRDQTP---DENDQVVVKITGHFYACQVAQRKIQEILTQV 179
>gi|413921493|gb|AFW61425.1| hypothetical protein ZEAMMB73_181287 [Zea mays]
Length = 699
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 80/179 (44%), Gaps = 23/179 (12%)
Query: 48 EEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKI---ADILPDSEERIVVISAREN 104
+E+ + +VG LIGK G +R Q +GA I+I AD ++ R V +
Sbjct: 145 QEISRMIEVPNSRVGVLIGKAGETIRNLQMSSGAKIQITKDADADSNALTRPVELVGTLG 204
Query: 105 SEMRHSPAQDAVMRVHSRIAEIGFEPGQAVVAR-------------LLVHSQQIGCLLGR 151
S + A + + S IAE A++AR + V ++G ++G+
Sbjct: 205 SVDK------AELLIKSVIAEAEAGGSPALIARGFGSGQPGSEQFEMTVPDNKVGLIIGK 258
Query: 152 GGHIVSEMRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETI 210
GG + M+ +GA I++ P+ P + + IV+V GN ++ A I + +T
Sbjct: 259 GGDAIKGMQTKSGARIQLIPQ-HPPEGVTLTERIVRVTGNKKQIELAKDLIKQAMNQTF 316
>gi|390177068|ref|XP_003736271.1| GA30025, isoform E [Drosophila pseudoobscura pseudoobscura]
gi|388858895|gb|EIM52344.1| GA30025, isoform E [Drosophila pseudoobscura pseudoobscura]
Length = 548
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 84/170 (49%), Gaps = 20/170 (11%)
Query: 52 FKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIA---DILPDSEERIVVISARENSEM- 107
K+L G++IGKGG + + Q +TGA +K++ D P + ER+ +I+ + M
Sbjct: 46 MKILVPAVASGAIIGKGGETIASLQKDTGARVKMSKSHDFYPGTTERVCLITGSTEAIMV 105
Query: 108 ---------RHSPAQDAVMRVHSRIAEIGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSE 158
R P D ++ ++ E + V ++LV + G ++G+GG + +
Sbjct: 106 VLDFIMDKIREKP--DLTTKIIDAESKQTQERDKQV--KILVPNSTAGMIIGKGGAFIKQ 161
Query: 159 MRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRE 208
++ +G+ +++ Q P+ S + + +IG+ + ++A I S++ E
Sbjct: 162 IKEDSGSYVQI---SQKPKDVSLQERCITIIGDKENNKNACKMILSKIVE 208
>gi|431913482|gb|ELK15157.1| Poly(rC)-binding protein 4 [Pteropus alecto]
Length = 403
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 92/214 (42%), Gaps = 61/214 (28%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIA-DILPDSEERIVVISA------- 101
V +L+ + GSLIGK G+ ++ + TGA +++A D+LP+S ER V +S
Sbjct: 102 VTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQVAGDLLPNSTERAVTVSGVPDAIIL 161
Query: 102 ---RENSEMRHSPAQDAVMRVHSRI------------------------AEI-------- 126
+ + + SP + A + H + AE+
Sbjct: 162 CVRQICAVILESPPKGATIPYHPSLSLGTVLLSANQGFSVQGQYGAVTPAEVTKLQQLSG 221
Query: 127 ------------GFEPG-QAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKD 173
G +PG Q LV + IGC++GR G +SE+R+ +GA I++ +
Sbjct: 222 HAVPFASPGMVPGLDPGAQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKI--GN 279
Query: 174 QAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLR 207
QA G H V + G+ S+ A + IT+ L
Sbjct: 280 QAEGAGERH---VTITGSPVSIALAQYLITACLE 310
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 62/124 (50%), Gaps = 8/124 (6%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMRH 109
+ ++L H +VGS+IGK G V+ + ++ A I I++ ERI I+ + + H
Sbjct: 18 LTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISE--GSCPERITTITG-STAAVFH 74
Query: 110 SPAQDAVMRVHSRIAEIGFEPGQA----VVARLLVHSQQIGCLLGRGGHIVSEMRRATGA 165
+ + A ++ + G V RL++ + Q G L+G+ G + E+R TGA
Sbjct: 75 AVSMIA-FKLDEDLCSATANGGNISRPPVTLRLVIPASQCGSLIGKAGTKIKEIRETTGA 133
Query: 166 SIRV 169
++V
Sbjct: 134 QVQV 137
Score = 40.8 bits (94), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 36/65 (55%)
Query: 354 EVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATEGVVMVSGTSDQMRAAQSL 413
E ++P + V G S +S IRQ+SGA++ + + GA E V ++G+ + AQ L
Sbjct: 245 EFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQAEGAGERHVTITGSPVSIALAQYL 304
Query: 414 IHAFI 418
I A +
Sbjct: 305 ITACL 309
>gi|357465709|ref|XP_003603139.1| Far upstream element-binding protein [Medicago truncatula]
gi|355492187|gb|AES73390.1| Far upstream element-binding protein [Medicago truncatula]
Length = 605
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 67/137 (48%), Gaps = 28/137 (20%)
Query: 53 KLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIA---DILPDSEERIVVISARENSEMRH 109
K+ +VG LIGKGG ++ Q ++GA I++ D P+S+ R+V E+
Sbjct: 89 KIEIPNGRVGVLIGKGGETIKYLQMQSGAKIQVTRDMDADPNSQTRMV--------ELMG 140
Query: 110 SPAQDAVMRVHSRIAEI--GFEPGQAV--VARLLVHS-----------QQIGCLLGRGGH 154
+P DAV I E+ E G +V R++ S ++G ++G+GG
Sbjct: 141 TP--DAVSSAEKLINEVLAEAEAGASVGGTRRMVAQSGGDEFVMQIPNNKVGLIIGKGGE 198
Query: 155 IVSEMRRATGASIRVFP 171
+ M+ +TGA I+V P
Sbjct: 199 TIKGMQASTGARIQVIP 215
>gi|432848574|ref|XP_004066413.1| PREDICTED: poly(rC)-binding protein 3-like [Oryzias latipes]
Length = 349
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 63/123 (51%), Gaps = 6/123 (4%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMRH 109
+ +LL H +VGS+IGK G V+ + ++GA I I++ + ERIV +
Sbjct: 16 LTIRLLMHGKEVGSIIGKKGETVKKMREDSGARINISE--GNCPERIVT-XXXXXXXIFK 72
Query: 110 SPAQDAVMRVHSRIAEIGFEPGQA---VVARLLVHSQQIGCLLGRGGHIVSEMRRATGAS 166
+ A A I + P + V RL+V + Q G L+G+GG + EMR +TGA
Sbjct: 73 AFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEMRESTGAQ 132
Query: 167 IRV 169
++V
Sbjct: 133 VQV 135
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 35/52 (67%), Gaps = 1/52 (1%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIA-DILPDSEERIVVIS 100
V +L+ + GSLIGKGGS ++ + TGA +++A D+LP+S ER V IS
Sbjct: 100 VTLRLVVPASQCGSLIGKGGSKIKEMRESTGAQVQVAGDMLPNSTERAVTIS 151
Score = 42.0 bits (97), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 39/67 (58%)
Query: 350 STTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATEGVVMVSGTSDQMRA 409
++T E+ IP + + G + ++ IRQ+SGA + + + G++E + ++GT +
Sbjct: 265 ASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANAMEGSSERQITITGTPANISL 324
Query: 410 AQSLIHA 416
AQ LI+A
Sbjct: 325 AQYLINA 331
>gi|341891904|gb|EGT47839.1| CBN-PES-4 protein [Caenorhabditis brenneri]
Length = 438
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 67/125 (53%), Gaps = 13/125 (10%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISAR-----EN 104
+ +LL +VGS+IGK G ++ + E+GA I I+D ERIV I+ +
Sbjct: 76 LTIRLLMQGKEVGSIIGKKGDQIKKIREESGAKINISD--GSCPERIVTITGTLGVIGKA 133
Query: 105 SEMRHSPAQDAVMRVHSRIAEIGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATG 164
M + ++ ++ + + + P + R++V + Q G L+G+GG + ++R ATG
Sbjct: 134 FNMVCNKFEEDMLLLPNSV------PKPPITMRVIVPATQCGSLIGKGGSKIKDIREATG 187
Query: 165 ASIRV 169
ASI+V
Sbjct: 188 ASIQV 192
Score = 45.8 bits (107), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 44/81 (54%), Gaps = 11/81 (13%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIA-DILPDSEERIVVISARENSEMR 108
+ +++ + GSLIGKGGS ++ + TGASI++A ++LP S ER V +S
Sbjct: 157 ITMRVIVPATQCGSLIGKGGSKIKDIREATGASIQVASEMLPHSTERAVTLSGTA----- 211
Query: 109 HSPAQDAVMRVHSRIAEIGFE 129
DA+ +++ +I E
Sbjct: 212 -----DAINLCMTQVCQILLE 227
>gi|125773159|ref|XP_001357838.1| GA30025, isoform A [Drosophila pseudoobscura pseudoobscura]
gi|54637571|gb|EAL26973.1| GA30025, isoform A [Drosophila pseudoobscura pseudoobscura]
Length = 570
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 84/170 (49%), Gaps = 20/170 (11%)
Query: 52 FKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIA---DILPDSEERIVVISARENSEM- 107
K+L G++IGKGG + + Q +TGA +K++ D P + ER+ +I+ + M
Sbjct: 68 MKILVPAVASGAIIGKGGETIASLQKDTGARVKMSKSHDFYPGTTERVCLITGSTEAIMV 127
Query: 108 ---------RHSPAQDAVMRVHSRIAEIGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSE 158
R P D ++ ++ E + V ++LV + G ++G+GG + +
Sbjct: 128 VLDFIMDKIREKP--DLTTKIIDAESKQTQERDKQV--KILVPNSTAGMIIGKGGAFIKQ 183
Query: 159 MRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRE 208
++ +G+ +++ Q P+ S + + +IG+ + ++A I S++ E
Sbjct: 184 IKEDSGSYVQI---SQKPKDVSLQERCITIIGDKENNKNACKMILSKIVE 230
>gi|195107855|ref|XP_001998509.1| GI24011 [Drosophila mojavensis]
gi|193915103|gb|EDW13970.1| GI24011 [Drosophila mojavensis]
Length = 574
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/170 (22%), Positives = 84/170 (49%), Gaps = 20/170 (11%)
Query: 52 FKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIA---DILPDSEERIVVISAREN---- 104
K+L G++IGKGG + + Q +TGA +K++ D P + ER+ +I+
Sbjct: 68 MKILVPAVASGAIIGKGGETIASLQKDTGARVKMSKSHDFYPGTTERVCLITGSVEGIMT 127
Query: 105 ------SEMRHSPAQDAVMRVHSRIAEIGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSE 158
++R P D ++ ++ E + V ++LV + G ++G+GG + +
Sbjct: 128 VVDFIMDKIREKP--DLTTKIIDAESKQAQERDKQV--KILVPNSTAGMIIGKGGAFIKQ 183
Query: 159 MRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRE 208
++ +G+ +++ Q P+ S + + +IG+ + ++A I S++ E
Sbjct: 184 IKEESGSYVQI---SQKPKDVSLQERCITIIGDKENNKNACKMILSKIVE 230
>gi|24645370|ref|NP_731356.1| pasilla, isoform C [Drosophila melanogaster]
gi|11526808|gb|AAG36790.1|AF220423_1 PASILLA splice variant 4 [Drosophila melanogaster]
gi|23170800|gb|AAF54378.2| pasilla, isoform C [Drosophila melanogaster]
Length = 561
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 85/177 (48%), Gaps = 20/177 (11%)
Query: 45 FYEEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIA---DILPDSEERIVVISA 101
F E K+L G++IGKGG + + Q +TGA +K++ D P + ER+ +I+
Sbjct: 50 FCETTYHMKILVPAVASGAIIGKGGETIASLQKDTGARVKMSKSHDFYPGTTERVCLITG 109
Query: 102 RENSEM----------RHSPAQDAVMRVHSRIAEIGFEPGQAVVARLLVHSQQIGCLLGR 151
+ M R P D ++ ++ E + V ++LV + G ++G+
Sbjct: 110 STEAIMVVMEFIMDKIREKP--DLTNKIVDTDSKQTQERDKQV--KILVPNSTAGMIIGK 165
Query: 152 GGHIVSEMRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRE 208
GG + +++ +G+ +++ Q P S + + +IG+ + ++A I S++ E
Sbjct: 166 GGAFIKQIKEESGSYVQI---SQKPTDVSLQERCITIIGDKENNKNACKMILSKIVE 219
>gi|328723973|ref|XP_003247998.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1-like
isoform 3 [Acyrthosiphon pisum]
gi|328723975|ref|XP_003247999.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1-like
isoform 4 [Acyrthosiphon pisum]
Length = 553
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 87/174 (50%), Gaps = 18/174 (10%)
Query: 61 VGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMRHSPAQDAVM--- 117
VG++IG GS +R+ +GAS+K+A ++E++ VV +A + + + + + ++
Sbjct: 375 VGAIIGTKGSNIRSMIRFSGASVKVAS--TENEKQGVVGNAGDANSAQQASRKVTIVGTA 432
Query: 118 --------RVHSRIAEIGFEPGQAVV---ARLLVHSQQIGCLLGRGGHIVSEMRRATGAS 166
+ ++ + GF P V +LV S Q+G ++GRGG V E++R TG+
Sbjct: 433 DSQWKAQGMIFDKLRDEGFVPNNEEVRLTVEILVPSSQVGRIIGRGGSNVRELQRVTGSI 492
Query: 167 IRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKRPGPNN 220
I++ Q G+ V +IG++ + Q A I S + P+ RP N
Sbjct: 493 IKL--PTQGSTDGTEDTTTVHIIGHFLATQSAQRRIRSMVASGANPVPRPQQRN 544
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 89/199 (44%), Gaps = 21/199 (10%)
Query: 13 EPFHQRGYAPGYHSRGYSSGPGHETVGGRNRMFYEEEVVFKLLCHLDKVGSLIGKGGSIV 72
EP +R R Y + T+G R + E ++L H D VG++IG+GGS +
Sbjct: 116 EPAMERRNRSAIRQRTYGAPGATPTIGNR-----QTEFPLRILVHSDMVGAIIGRGGSTI 170
Query: 73 RTFQNETGASIKI--ADILPDSEERIVVISARENSEMRHSPAQDAVMRVHSRIAEIGFEP 130
R +T A + + D + E+ I + EN + A ++ V + E
Sbjct: 171 RQITQQTRARVDVHRKDNVGSLEKAITIYGNPENC----TNACRKILEVMQQ--EATNTN 224
Query: 131 GQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAPRCGSPHDEIVQVIG 190
V+ ++L H+ IG ++G+ G+ + + T I V + ++ I+ V G
Sbjct: 225 KSDVILKILAHNNLIGRIIGKEGNTIKRIMSETETKITVSSFN--------YERIITVKG 276
Query: 191 NYHSVQDALFHITSRLRET 209
+ ++ A I+++LR++
Sbjct: 277 SIENMSKAEAQISAKLRQS 295
>gi|328723977|ref|XP_001952825.2| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1-like
isoform 1 [Acyrthosiphon pisum]
Length = 563
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 87/174 (50%), Gaps = 18/174 (10%)
Query: 61 VGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMRHSPAQDAVM--- 117
VG++IG GS +R+ +GAS+K+A ++E++ VV +A + + + + + ++
Sbjct: 381 VGAIIGTKGSNIRSMIRFSGASVKVAS--TENEKQGVVGNAGDANSAQQASRKVTIVGTA 438
Query: 118 --------RVHSRIAEIGFEPGQAVV---ARLLVHSQQIGCLLGRGGHIVSEMRRATGAS 166
+ ++ + GF P V +LV S Q+G ++GRGG V E++R TG+
Sbjct: 439 DSQWKAQGMIFDKLRDEGFVPNNEEVRLTVEILVPSSQVGRIIGRGGSNVRELQRVTGSI 498
Query: 167 IRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKRPGPNN 220
I++ Q G+ V +IG++ + Q A I S + P+ RP N
Sbjct: 499 IKL--PTQGSTDGTEDTTTVHIIGHFLATQSAQRRIRSMVASGANPVPRPQQRN 550
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 89/199 (44%), Gaps = 15/199 (7%)
Query: 13 EPFHQRGYAPGYHSRGYSSGPGHETVGGRNRMFYEEEVVFKLLCHLDKVGSLIGKGGSIV 72
EP +R R Y + T+G R + E ++L H D VG++IG+GGS +
Sbjct: 116 EPAMERRNRSAIRQRTYGAPGATPTIGNR-----QTEFPLRILVHSDMVGAIIGRGGSTI 170
Query: 73 RTFQNETGASIKI--ADILPDSEERIVVISARENSEMRHSPAQDAVMRVHSRIAEIGFEP 130
R +T A + + D + E+ I + EN + A ++ V + E
Sbjct: 171 RQITQQTRARVDVHRKDNVGSLEKAITIYGNPENC----TNACRKILEVMQQ--EATNTN 224
Query: 131 GQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAPRCGSPHDEIVQVIG 190
V+ ++L H+ IG ++G+ G+ + + T I V + ++ I+ V G
Sbjct: 225 KSDVILKILAHNNLIGRIIGKEGNTIKRIMSETETKITVSSINDINSFN--YERIITVKG 282
Query: 191 NYHSVQDALFHITSRLRET 209
+ ++ A I+++LR++
Sbjct: 283 SIENMSKAEAQISAKLRQS 301
>gi|268570691|ref|XP_002640810.1| C. briggsae CBR-PES-4 protein [Caenorhabditis briggsae]
Length = 447
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 67/125 (53%), Gaps = 13/125 (10%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISAR-----EN 104
+ +LL +VGS+IGK G ++ + E+GA I I+D ERIV I+ +
Sbjct: 74 LTIRLLMQGKEVGSIIGKKGDQIKKIREESGAKINISD--GSCPERIVTITGTLGVIGKA 131
Query: 105 SEMRHSPAQDAVMRVHSRIAEIGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATG 164
M + ++ ++ + + + P + R++V + Q G L+G+GG + ++R ATG
Sbjct: 132 FNMVCNKFEEDMLLLPNSV------PKPPITMRVIVPATQCGSLIGKGGSKIKDIREATG 185
Query: 165 ASIRV 169
ASI+V
Sbjct: 186 ASIQV 190
Score = 45.8 bits (107), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 44/81 (54%), Gaps = 11/81 (13%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIA-DILPDSEERIVVISARENSEMR 108
+ +++ + GSLIGKGGS ++ + TGASI++A ++LP S ER V +S
Sbjct: 155 ITMRVIVPATQCGSLIGKGGSKIKDIREATGASIQVASEMLPHSTERAVTLSGTA----- 209
Query: 109 HSPAQDAVMRVHSRIAEIGFE 129
DA+ +++ +I E
Sbjct: 210 -----DAINLCMTQVCQILLE 225
>gi|6687391|emb|CAB64936.1| heterogeneous nuclear ribonucleoprotein (hnRNP) [Drosophila
melanogaster]
Length = 496
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 80/174 (45%), Gaps = 20/174 (11%)
Query: 41 RNRMFYEEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVIS 100
RNR EE V ++L G++IGKGG ++ + + A++ + D ER + IS
Sbjct: 17 RNR--RNEETV-RILIPSSIAGAVIGKGGQHIQKMRTQYKATVSVDD--SQGPERTIQIS 71
Query: 101 ARENSEMRHSPAQDAVMRVHSRIAEIGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSEMR 160
A S + + + + + E + RLL+H GC++G+GG + E+R
Sbjct: 72 ADIES----------TLEIITEMLKYFEERDEDFDVRLLIHQSLAGCVIGKGGQKIKEIR 121
Query: 161 RATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMK 214
G + AP+ D +VQ +G V +A+ + + R+T P+K
Sbjct: 122 DRIGCRFLKVFSNVAPQS---TDRVVQTVGKQSQVIEAVREVITLTRDT--PIK 170
>gi|328723971|ref|XP_003247997.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1-like
isoform 2 [Acyrthosiphon pisum]
Length = 559
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 87/174 (50%), Gaps = 18/174 (10%)
Query: 61 VGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMRHSPAQDAVM--- 117
VG++IG GS +R+ +GAS+K+A ++E++ VV +A + + + + + ++
Sbjct: 381 VGAIIGTKGSNIRSMIRFSGASVKVAS--TENEKQGVVGNAGDANSAQQASRKVTIVGTA 438
Query: 118 --------RVHSRIAEIGFEPGQAVV---ARLLVHSQQIGCLLGRGGHIVSEMRRATGAS 166
+ ++ + GF P V +LV S Q+G ++GRGG V E++R TG+
Sbjct: 439 DSQWKAQGMIFDKLRDEGFVPNNEEVRLTVEILVPSSQVGRIIGRGGSNVRELQRVTGSI 498
Query: 167 IRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKRPGPNN 220
I++ Q G+ V +IG++ + Q A I S + P+ RP N
Sbjct: 499 IKL--PTQGSTDGTEDTTTVHIIGHFLATQSAQRRIRSMVASGANPVPRPQQRN 550
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 89/199 (44%), Gaps = 15/199 (7%)
Query: 13 EPFHQRGYAPGYHSRGYSSGPGHETVGGRNRMFYEEEVVFKLLCHLDKVGSLIGKGGSIV 72
EP +R R Y + T+G R + E ++L H D VG++IG+GGS +
Sbjct: 116 EPAMERRNRSAIRQRTYGAPGATPTIGNR-----QTEFPLRILVHSDMVGAIIGRGGSTI 170
Query: 73 RTFQNETGASIKI--ADILPDSEERIVVISARENSEMRHSPAQDAVMRVHSRIAEIGFEP 130
R +T A + + D + E+ I + EN + A ++ V + E
Sbjct: 171 RQITQQTRARVDVHRKDNVGSLEKAITIYGNPENC----TNACRKILEVMQQ--EATNTN 224
Query: 131 GQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAPRCGSPHDEIVQVIG 190
V+ ++L H+ IG ++G+ G+ + + T I V + ++ I+ V G
Sbjct: 225 KSDVILKILAHNNLIGRIIGKEGNTIKRIMSETETKITVSSINDINSFN--YERIITVKG 282
Query: 191 NYHSVQDALFHITSRLRET 209
+ ++ A I+++LR++
Sbjct: 283 SIENMSKAEAQISAKLRQS 301
>gi|327289205|ref|XP_003229315.1| PREDICTED: RNA-binding protein Nova-1-like [Anolis carolinensis]
Length = 507
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 82/184 (44%), Gaps = 37/184 (20%)
Query: 49 EVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIA---DILPDSEERIVVISARENS 105
E K+L GS+IGKGG + Q ETGA+IK++ D P + ER+ ++
Sbjct: 69 EYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQG---- 124
Query: 106 EMRHSPAQDAVMRVHSRIAEIGFEPGQAVV---------------------ARLLVHSQQ 144
+A+ VH+ IAE E Q+VV A+++V +
Sbjct: 125 ------TAEALNAVHNFIAEKVREIPQSVVKPESVNILQPQTTMNPDRAKQAKVIVPNST 178
Query: 145 IGCLLGRGGHIVSEMRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITS 204
G ++G+GG V + +GA +++ Q P + + +V + G + A+ I
Sbjct: 179 AGLIIGKGGATVKAIMEQSGAWVQL---SQKPEGINLQERVVTISGEPEQIHKAVDIIVQ 235
Query: 205 RLRE 208
+++E
Sbjct: 236 KIQE 239
>gi|195158519|ref|XP_002020133.1| GL13824 [Drosophila persimilis]
gi|194116902|gb|EDW38945.1| GL13824 [Drosophila persimilis]
Length = 554
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 84/170 (49%), Gaps = 20/170 (11%)
Query: 52 FKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIA---DILPDSEERIVVISARENSEM- 107
K+L G++IGKGG + + Q +TGA +K++ D P + ER+ +I+ + M
Sbjct: 74 MKILVPAVASGAIIGKGGETIASLQKDTGARVKMSKSHDFYPGTTERVCLITGSTEAIMV 133
Query: 108 ---------RHSPAQDAVMRVHSRIAEIGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSE 158
R P D ++ ++ E + V ++LV + G ++G+GG + +
Sbjct: 134 VLDFIMDKIREKP--DLTTKIIDAESKQTQERDKQV--KILVPNSTAGMIIGKGGAFIKQ 189
Query: 159 MRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRE 208
++ +G+ +++ Q P+ S + + +IG+ + ++A I S++ E
Sbjct: 190 IKEDSGSYVQI---SQKPKDVSLQERCITIIGDKENNKNACKMILSKIVE 236
>gi|297813443|ref|XP_002874605.1| KH domain-containing protein [Arabidopsis lyrata subsp. lyrata]
gi|297320442|gb|EFH50864.1| KH domain-containing protein [Arabidopsis lyrata subsp. lyrata]
Length = 730
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 87/199 (43%), Gaps = 40/199 (20%)
Query: 60 KVGSLIGKGGSIVRTFQNETGASIKIADILPDSE----------ERIVVISARENSEMRH 109
KVG LIGKGG +R Q +GA I+ IL DSE E I ++ EN+E
Sbjct: 192 KVGVLIGKGGETIRYLQFNSGAKIQ---ILRDSEADPNSALRPVEIIGTVACIENAERLI 248
Query: 110 SPAQDAVMRVHSRIAEIGFEPGQAVVAR---------------LLVHSQQIGCLLGRGGH 154
S AV+ AE G P A+VAR + V + ++G ++GRGG
Sbjct: 249 S----AVIAE----AEAGGSP--ALVARGHPSTHAIGIPEQIEIKVPNDKVGLIIGRGGE 298
Query: 155 IVSEMRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMK 214
+ +M+ +GA I++ P Q + V++ G+ + A I + + P
Sbjct: 299 TIKDMQTRSGARIQLIP--QHAEGDGLKERTVRISGDKMQIDIATDMIKDVMNQNARPSP 356
Query: 215 RPGPNNGHSYLPPFPEMPP 233
G N +Y P P PP
Sbjct: 357 YSGCYNQPAYRPRGPGGPP 375
>gi|195388678|ref|XP_002053006.1| GJ23641 [Drosophila virilis]
gi|194151092|gb|EDW66526.1| GJ23641 [Drosophila virilis]
Length = 574
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/170 (22%), Positives = 84/170 (49%), Gaps = 20/170 (11%)
Query: 52 FKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIA---DILPDSEERIVVISAREN---- 104
K+L G++IGKGG + + Q +TGA +K++ D P + ER+ +I+
Sbjct: 68 MKILVPAVASGAIIGKGGETIASLQKDTGARVKMSKSHDFYPGTTERVCLITGSVEGIMT 127
Query: 105 ------SEMRHSPAQDAVMRVHSRIAEIGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSE 158
++R P D ++ ++ E + V ++LV + G ++G+GG + +
Sbjct: 128 VVDFIMDKIREKP--DLTTKIIDAESKQAQERDKQV--KILVPNSTAGMIIGKGGAFIKQ 183
Query: 159 MRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRE 208
++ +G+ +++ Q P+ S + + +IG+ + ++A I S++ E
Sbjct: 184 IKEESGSYVQI---SQKPKDVSLQERCITIIGDKENNKNACKMILSKIVE 230
>gi|449450341|ref|XP_004142921.1| PREDICTED: uncharacterized protein LOC101216803 [Cucumis sativus]
gi|449494409|ref|XP_004159539.1| PREDICTED: uncharacterized LOC101216803 [Cucumis sativus]
Length = 694
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 80/174 (45%), Gaps = 29/174 (16%)
Query: 53 KLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIA---DILPDSEERIVVISARENSEMRH 109
K+ +VG +IGKGG ++ Q ++GA I++ D P+S R+V E+
Sbjct: 138 KIEIPNGRVGVIIGKGGETIKYLQLQSGAKIQVTRDMDADPNSTTRMV--------ELMG 189
Query: 110 SPAQDAVMRVHSRIAEIGFEP---GQAVVARLL------------VHSQQIGCLLGRGGH 154
+P D + + I ++ E G +V+R L + + ++G ++G+GG
Sbjct: 190 TP--DQIAKAEQLINDVLSEAESGGSGIVSRRLTGPSGSEQFVMKIPNNKVGLVIGKGGE 247
Query: 155 IVSEMRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRE 208
+ M+ TGA I+V P P S + +Q+ G+ ++ A + + E
Sbjct: 248 TIKSMQARTGARIQVIPLHLPPGDTS-TERTLQIDGSSEQIESAKQLVNEVISE 300
>gi|326519350|dbj|BAJ96674.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 683
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 88/326 (26%), Positives = 129/326 (39%), Gaps = 64/326 (19%)
Query: 48 EEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKI---ADILPDSEERIV-----VI 99
+E + KVG LIGK G +R Q +GA I+I AD+ D+ R V V
Sbjct: 149 QETTRLIDVPNTKVGVLIGKAGETIRNLQMSSGAKIQITKDADVSSDAMTRPVELVGTVE 208
Query: 100 SARENSEMRHSPAQDAVMRVHSRIAEIGFEPGQAVVAR--LLVHSQQIGCLLGRGGHIVS 157
S + ++ S +A + GF GQ+ + +LV ++G ++G+GG +
Sbjct: 209 SIDKAEQLIKSVIAEAEAGGSPALIAKGFGSGQSGSEQFEMLVPDNKVGLIIGKGGETIK 268
Query: 158 EMRRATGASIRVFPKDQAPRCGSPHDE-IVQVIGNYHSVQDALFHITSRLRETIFPMKRP 216
++ +GA I++ P Q P G+ E V+V GN ++ A I + +T FP
Sbjct: 269 NLQTRSGARIQLIP--QHPPAGTTLTERTVRVTGNKKQIEAAKELIKQAMSQT-FPRNTT 325
Query: 217 -----GPNNGH-------SYLPP--------FPEMPPPPFRPRHNPASPGSYPSPVGPFH 256
GP + H S P +P PP P P G YP P
Sbjct: 326 QSGGYGPQHHHPQGHGPASQWGPRSQPQQYGYPPRGPPQNAPYSQPPY-GGYPQQPPPRG 384
Query: 257 SM--DRGMGP--------------SQPFDHQAAFSHGMDPMVPPNSDRIPFPYGSERPGH 300
M D+ GP SQP++ Q YG P
Sbjct: 385 GMGWDQRQGPPPHQGGGYDYYKQGSQPYESQPPNYP--------PGPGNYNSYG---PSQ 433
Query: 301 GPTFDRPPSPRSWTPQ--GVGGGDPR 324
P++ +P P+S PQ G G GDPR
Sbjct: 434 APSYGQPQYPQSAPPQNYGPGYGDPR 459
>gi|426355648|ref|XP_004065478.1| PREDICTED: LOW QUALITY PROTEIN: insulin-like growth factor 2
mRNA-binding protein 3 [Gorilla gorilla gorilla]
Length = 600
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 83/154 (53%), Gaps = 15/154 (9%)
Query: 61 VGSLIGKGGSIVRTFQNETGASIKIADI-LPDSEERIVVISARENSEMRHSPAQDAVMRV 119
VG++IGK G ++ GASIKIA PD++ R+V+I+ ++ + A R+
Sbjct: 438 VGAIIGKQGQHIKQLSRFAGASIKIAPAEAPDAKVRMVIITGPPEAQFK------AQGRI 491
Query: 120 HSRIAEIGF-EPGQAVV--ARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAP 176
+ +I E F P + V A + V S G ++G+GG V+E++ + A + V P+DQ P
Sbjct: 492 YGKIKEENFVSPKEEVKLEAHIRVPSFAAGRVIGKGGKTVNELQNLSSAEV-VVPRDQTP 550
Query: 177 RCGSPHDE-IVQVIGNYHSVQDALFHITSRLRET 209
+D+ +V++ G++++ Q A I L +
Sbjct: 551 ---DENDQVVVKITGHFYACQVAQRKIQEILTQV 581
>gi|380792097|gb|AFE67924.1| poly(rC)-binding protein 2 isoform f, partial [Macaca mulatta]
Length = 197
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 82/165 (49%), Gaps = 12/165 (7%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMRH 109
+ +LL H +VGS+IGK G V+ + E+GA I I++ + ERI+ ++ N+ +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISE--GNCPERIITLAGPTNAIFKA 71
Query: 110 SPAQDAVMRVHSRIAEIGFEPGQA----VVARLLVHSQQIGCLLGRGGHIVSEMRRATGA 165
+ ++ I+ A V RL+V + Q G L+G+GG + E+R +TGA
Sbjct: 72 FAM--IIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGA 129
Query: 166 SIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETI 210
++V D P + + + + G S+ + + I + ET+
Sbjct: 130 QVQV-AGDMLP---NSTERAITIAGIPQSIIECVKQICVVMLETL 170
>gi|390177066|ref|XP_003736270.1| GA30025, isoform D [Drosophila pseudoobscura pseudoobscura]
gi|388858894|gb|EIM52343.1| GA30025, isoform D [Drosophila pseudoobscura pseudoobscura]
Length = 576
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 84/170 (49%), Gaps = 20/170 (11%)
Query: 52 FKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIA---DILPDSEERIVVISARENSEM- 107
K+L G++IGKGG + + Q +TGA +K++ D P + ER+ +I+ + M
Sbjct: 74 MKILVPAVASGAIIGKGGETIASLQKDTGARVKMSKSHDFYPGTTERVCLITGSTEAIMV 133
Query: 108 ---------RHSPAQDAVMRVHSRIAEIGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSE 158
R P D ++ ++ E + V ++LV + G ++G+GG + +
Sbjct: 134 VLDFIMDKIREKP--DLTTKIIDAESKQTQERDKQV--KILVPNSTAGMIIGKGGAFIKQ 189
Query: 159 MRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRE 208
++ +G+ +++ Q P+ S + + +IG+ + ++A I S++ E
Sbjct: 190 IKEDSGSYVQI---SQKPKDVSLQERCITIIGDKENNKNACKMILSKIVE 236
>gi|348537598|ref|XP_003456280.1| PREDICTED: poly(rC)-binding protein 4-like [Oreochromis niloticus]
Length = 593
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 63/132 (47%), Gaps = 24/132 (18%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMRH 109
+ +LL H +VGS+IGK G V+ + E+ A I I++ ERI+ I+
Sbjct: 128 LTLRLLMHGKEVGSIIGKKGETVKRIREESSARINISE--GSCPERIITITG-------- 177
Query: 110 SPAQDAVMRVHSRIAEIGFEPGQAVVA------------RLLVHSQQIGCLLGRGGHIVS 157
D V R + I E A+VA RL++ + Q G L+G+GG +
Sbjct: 178 --PTDCVFRAFTMITFKLEEDLMALVANGTVTSKPPVTLRLVIPASQCGSLIGKGGSKIK 235
Query: 158 EMRRATGASIRV 169
E+R TGA ++V
Sbjct: 236 EIRETTGAQVQV 247
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 45/81 (55%), Gaps = 11/81 (13%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIA-DILPDSEERIVVISARENSEMR 108
V +L+ + GSLIGKGGS ++ + TGA +++A D+LP+S ER V IS
Sbjct: 212 VTLRLVIPASQCGSLIGKGGSKIKEIRETTGAQVQVAGDLLPNSTEREVTISG------- 264
Query: 109 HSPAQDAVMRVHSRIAEIGFE 129
+QDA+++ I + E
Sbjct: 265 ---SQDAIIQCVKLICTVILE 282
Score = 41.2 bits (95), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 35/69 (50%), Gaps = 1/69 (1%)
Query: 352 TIEVVIPQLYMAHVYGENNSNLSHIRQISGANV-VVNDPKPGATEGVVMVSGTSDQMRAA 410
T+ +VIP + G+ S + IR+ +GA V V D P +TE V +SG+ D +
Sbjct: 213 TLRLVIPASQCGSLIGKGGSKIKEIRETTGAQVQVAGDLLPNSTEREVTISGSQDAIIQC 272
Query: 411 QSLIHAFIL 419
LI IL
Sbjct: 273 VKLICTVIL 281
Score = 38.1 bits (87), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 19/69 (27%), Positives = 37/69 (53%)
Query: 350 STTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATEGVVMVSGTSDQMRA 409
+T+ E++IP + + G + ++ IRQ+SGA + + ++ V +SGT +
Sbjct: 380 TTSQELLIPNDLIGSIIGRQGTKINEIRQVSGAQIKIGSQIDSTSDRHVTISGTPIAINL 439
Query: 410 AQSLIHAFI 418
AQ LI + +
Sbjct: 440 AQYLITSCL 448
>gi|25012554|gb|AAN71378.1| RE36563p, partial [Drosophila melanogaster]
Length = 605
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 85/177 (48%), Gaps = 20/177 (11%)
Query: 45 FYEEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIA---DILPDSEERIVVISA 101
F E K+L G++IGKGG + + Q +TGA +K++ D P + ER+ +I+
Sbjct: 94 FCETTYHMKILVPAVASGAIIGKGGETIASLQKDTGARVKMSKSHDFYPGTTERVCLITG 153
Query: 102 RENSEM----------RHSPAQDAVMRVHSRIAEIGFEPGQAVVARLLVHSQQIGCLLGR 151
+ M R P D ++ ++ E + V ++LV + G ++G+
Sbjct: 154 STEAIMVVMEFIMDKIREKP--DLTNKIVDTDSKQTQERDKQV--KILVPNSTAGMIIGK 209
Query: 152 GGHIVSEMRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRE 208
GG + +++ +G+ +++ Q P S + + +IG+ + ++A I S++ E
Sbjct: 210 GGAFIKQIKEESGSYVQI---SQKPTDVSLQERCITIIGDKENNKNACKMILSKIVE 263
>gi|170048061|ref|XP_001851517.1| nova [Culex quinquefasciatus]
gi|167870269|gb|EDS33652.1| nova [Culex quinquefasciatus]
Length = 534
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/242 (21%), Positives = 104/242 (42%), Gaps = 30/242 (12%)
Query: 52 FKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIA---DILPDSEERIVVISAREN---- 104
FK L G++IGKGG + + Q + GA +K++ D P + ER+ +IS +
Sbjct: 29 FKTLVPSVAAGAIIGKGGETIASLQKDAGARVKMSKAHDFYPGTSERVCLISGTVDGILT 88
Query: 105 ------SEMRHSPAQDAVMRVHSRIAEIGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSE 158
++R P D + A+ E + V ++LV + G ++G+ G + +
Sbjct: 89 VLDFIIDKIREKP--DMTKALTEADAKQAAERDKQV--KVLVPNSTAGMIIGKAGAFIKQ 144
Query: 159 MRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKRPGP 218
++ +G+ +++ Q P+ + + + +IG + + A I S++ E P
Sbjct: 145 IKEDSGSYVQI---SQKPKELTLQERCITIIGEKENNKIACKMILSKIVED--------P 193
Query: 219 NNGHSYLPPFPEM--PPPPFRPRHNPASPGSYPSPVGPFHSMDRGMGPSQPFDHQAAFSH 276
++G + ++ P F P +P + P+ S++ +G + P A
Sbjct: 194 SSGSCLNVSYADINGPVANFNPTGSPFAASQNPTFSSSTASLNSALGGAMPGASAAGLLG 253
Query: 277 GM 278
M
Sbjct: 254 AM 255
>gi|157114471|ref|XP_001652287.1| igf2 mRNA binding protein, putative [Aedes aegypti]
gi|108877277|gb|EAT41502.1| AAEL006876-PA [Aedes aegypti]
Length = 541
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 79/161 (49%), Gaps = 20/161 (12%)
Query: 59 DKVGSLIGKGGSIVRTFQNETGASIKIADI-----LPDSEERIVVISARENSEMRHSPAQ 113
+ VG++IG GS +R +GAS+KIA + L ER V I ++ +
Sbjct: 354 NAVGAIIGTKGSHIRNIIRFSGASVKIAPLEADKPLEQQTERKVTIVGTPEAQWK----- 408
Query: 114 DAVMRVHSRIAEIGFEPGQA---VVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVF 170
A + ++ E GF G + +LV S Q+G ++G+GG V E++R TG+ I+
Sbjct: 409 -AQYLIFEKMREEGFVSGTDDVRLTVEILVPSAQVGRIIGKGGQNVRELQRVTGSIIK-L 466
Query: 171 PKDQAPRCGSPHDE--IVQVIGNYHSVQDALFHITSRLRET 209
P+ +P DE V +IG + SVQ A I + + T
Sbjct: 467 PEHT---TNTPVDEETTVHIIGPFFSVQSAQRRIRTMMLAT 504
Score = 39.7 bits (91), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 39/185 (21%), Positives = 82/185 (44%), Gaps = 10/185 (5%)
Query: 27 RGYSSGPGHETVGGRNRMFYEEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKI- 85
RG S P + + G + + +LL + VG++IG+ GS +R + A + +
Sbjct: 104 RGARSRPQYAGMPGGGGPGRQTDFPLRLLVASEMVGAIIGRQGSTIRQITQNSRARVDVH 163
Query: 86 -ADILPDSEERIVVISARENSEMRHSPAQDAVMRVHSRIAEIGFEPGQAVVARLLVHSQQ 144
D + E+ I + EN + A ++ V + A G+ + ++L H+
Sbjct: 164 RKDNVGSLEKAITIYGNPENC----TSACKRILEVMQQEAN-NTNKGE-ICLKILAHNNL 217
Query: 145 IGCLLGRGGHIVSEMRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITS 204
IG ++G+ G+ + + + T I V + + I+ V G+ ++ I++
Sbjct: 218 IGRIIGKSGNTIKRIMQDTDTKITVSSINDINSFN--LERIITVKGSIDNMSRGESQISA 275
Query: 205 RLRET 209
+LR++
Sbjct: 276 KLRQS 280
>gi|50311087|ref|XP_455567.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49644703|emb|CAG98275.1| KLLA0F10703p [Kluyveromyces lactis]
Length = 417
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 80/380 (21%), Positives = 147/380 (38%), Gaps = 62/380 (16%)
Query: 52 FKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMRHSP 111
++LC + + ++G G V ++ET I ++D + ER++ + + R
Sbjct: 69 LRMLCLMKQASKVVGGKGERVNRIKSETNTRINVSDNINGVMERVIFVRGKCEEVAR--- 125
Query: 112 AQDAVMR-VHSRIAEIGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVF 170
A ++R +++ + E +V LL+ +GC++GR G + E+ + A +
Sbjct: 126 AFGKIVRAINNESDDDSNERSLPLVVNLLIPHHFMGCIIGRQGSRLHEIEDLSAARLMAS 185
Query: 171 PKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKRPGPNNGHSYLPPFPE 230
P+ Q P +D I+ + G V DA+ T + +TI + N + P P
Sbjct: 186 PQ-QLPMS---NDRILSLTG----VADAIHIATYYIGQTILENESKLKNKKSVFYHPGP- 236
Query: 231 MPPPPFRPRHNPASPGSYPSPVGPFHSMDRGMGPSQPFDHQAAFSHGMDPMVPPNSDRIP 290
+ +Y + + G P+ P D + PMV P+ +
Sbjct: 237 ---------MHSVLVNNY-----QMYMIYSGGAPTNPQD--------ITPMVAPHQEHHQ 274
Query: 291 FPYGSERPGHGPTFDRPPS-PRSWTPQGVGGGDPRGFDASSGFTPRNRPVESGNHAAILT 349
+ P T +R P S P G P V+S H I++
Sbjct: 275 Y-----HPMDKKTMNRRTKPPVSKYPIG----------PQQSLQPYTDMVDSCKHVKIIS 319
Query: 350 STT-----------IEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATEGVV 398
EV I ++ +V G+ N+ I+Q +G + +NDP G E +
Sbjct: 320 QLQQSPISPHLVLPQEVFIDNKFVGNVIGKGGKNIQQIKQSTGCMIKINDPVEGLDERKL 379
Query: 399 MVSGTSDQMRAAQSLIHAFI 418
++ GT + A +I+ I
Sbjct: 380 VLIGTPLATQTAIMMINNRI 399
>gi|156388117|ref|XP_001634548.1| predicted protein [Nematostella vectensis]
gi|156221632|gb|EDO42485.1| predicted protein [Nematostella vectensis]
Length = 338
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 67/133 (50%), Gaps = 21/133 (15%)
Query: 46 YEEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENS 105
+ +V K++ +GS+IGK GS ++ F+ E+ A I I+D + ERIV ++
Sbjct: 23 HSSNLVLKMIMQGKDIGSIIGKEGSTIKQFRQESNAHINISD--GSTPERIVSVTG---- 76
Query: 106 EMRHSPAQDAVMRVHSRIAEIGFEPGQA---------VVARLLVHSQQIGCLLGRGGHIV 156
+DAV+ + I + + ++ V RL+V Q G ++G+GG +
Sbjct: 77 ------TKDAVVTAFALIGQKLEDELKSNSKSNTTPPVTLRLIVPGSQCGSIIGKGGAKI 130
Query: 157 SEMRRATGASIRV 169
E+R +GAS+ V
Sbjct: 131 KEIREVSGASVVV 143
Score = 43.9 bits (102), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 65/301 (21%), Positives = 119/301 (39%), Gaps = 33/301 (10%)
Query: 134 VVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYH 193
+V ++++ + IG ++G+ G + + R+ + A I + GS + IV V G
Sbjct: 27 LVLKMIMQGKDIGSIIGKEGSTIKQFRQESNAHINISD-------GSTPERIVSVTGTKD 79
Query: 194 SVQDALFHITSRLRETIFPMKRPGPNNGHSYLPPFPEMPPPP------------FRPRHN 241
+V A I +L + + N+ + PP P + +
Sbjct: 80 AVVTAFALIGQKLEDEL------KSNSKSNTTPPVTLRLIVPGSQCGSIIGKGGAKIKEI 133
Query: 242 PASPGSYPSPVGPFH--SMDRGM---GPSQPFDHQAAFSHGMDPMVPPNSDRIPFPYGSE 296
G+ G F S +R + G + + G+ PP P PY
Sbjct: 134 REVSGASVVVAGEFLPGSSERAVTLSGTPEALETCIDLLCGVMIEFPPRGH--PMPYTPH 191
Query: 297 RPGHGPTFDRPPSPRSW-TPQGVGGGDPRGFDASSGFTPRNRPVESGNHAAILTSTTIEV 355
+ F PP + P G+ P GF A G R + T+ +
Sbjct: 192 KLQQQFGFYGPPQGFGYPGPYGMPHAFPNGFMAGRGPYGGGRKGKGPPPPQPGPITSHTM 251
Query: 356 VIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATEGVVMVSGTSDQMRAAQSLIH 415
I + + + G+ S ++ IRQ+SGA++ + D + G + V+++GT++ + AQ LI+
Sbjct: 252 TILKGAVGSIIGQKGSYITGIRQMSGASIKIGDSENGDDKREVLITGTAEAVGLAQFLIN 311
Query: 416 A 416
A
Sbjct: 312 A 312
Score = 41.6 bits (96), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 40/72 (55%), Gaps = 6/72 (8%)
Query: 352 TIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVV-NDPKPGATEGVVMVSGTSDQMRAA 410
T+ +++P + G+ + + IR++SGA+VVV + PG++E V +SGT + +
Sbjct: 109 TLRLIVPGSQCGSIIGKGGAKIKEIREVSGASVVVAGEFLPGSSERAVTLSGTPEALETC 168
Query: 411 QSLIHAFILCGV 422
L LCGV
Sbjct: 169 IDL-----LCGV 175
>gi|194384644|dbj|BAG59482.1| unnamed protein product [Homo sapiens]
Length = 301
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 66/124 (53%), Gaps = 8/124 (6%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMRH 109
+ +LL H +VGS+IGK G V+ + E+GA I I++ + ERI+ ++ N+ +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISE--GNCPERIITLAGPTNAIFKA 71
Query: 110 SPAQDAVMRVHSRIAEIGFEPGQA----VVARLLVHSQQIGCLLGRGGHIVSEMRRATGA 165
+ ++ I+ A V RL+V + Q G L+G+GG + E+R +TGA
Sbjct: 72 FAM--IIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGA 129
Query: 166 SIRV 169
++V
Sbjct: 130 QVQV 133
Score = 45.1 bits (105), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 34/52 (65%), Gaps = 1/52 (1%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIA-DILPDSEERIVVIS 100
V +L+ + GSLIGKGG ++ + TGA +++A D+LP+S ER + I+
Sbjct: 98 VTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIA 149
>gi|195037250|ref|XP_001990077.1| GH18435 [Drosophila grimshawi]
gi|193894273|gb|EDV93139.1| GH18435 [Drosophila grimshawi]
Length = 569
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/170 (22%), Positives = 84/170 (49%), Gaps = 20/170 (11%)
Query: 52 FKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIA---DILPDSEERIVVISAREN---- 104
K+L G++IGKGG + + Q +TGA +K++ D P + ER+ +I+
Sbjct: 68 MKILVPAVASGAIIGKGGETIASLQKDTGARVKMSKSHDFYPGTTERVCLITGSVEGIMT 127
Query: 105 ------SEMRHSPAQDAVMRVHSRIAEIGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSE 158
++R P D ++ ++ E + V ++LV + G ++G+GG + +
Sbjct: 128 VVDFIMDKIREKP--DLTTKIIDAESKQAQERDKQV--KILVPNSTAGMIIGKGGAFIKQ 183
Query: 159 MRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRE 208
++ +G+ +++ Q P+ S + + +IG+ + ++A I S++ E
Sbjct: 184 IKEESGSYVQI---SQKPKDVSLQERCITIIGDKENNKNACKMILSKIVE 230
>gi|281363839|ref|NP_001163216.1| bancal, isoform E [Drosophila melanogaster]
gi|272432584|gb|ACZ94488.1| bancal, isoform E [Drosophila melanogaster]
Length = 493
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 80/174 (45%), Gaps = 20/174 (11%)
Query: 41 RNRMFYEEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVIS 100
RNR EE V ++L G++IGKGG ++ + + A++ + D ER + IS
Sbjct: 17 RNR--RNEETV-RILIPSSIAGAVIGKGGQHIQKMRTQYKATVSVDD--SQGPERTIQIS 71
Query: 101 ARENSEMRHSPAQDAVMRVHSRIAEIGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSEMR 160
A S + + + + + E + RLL+H GC++G+GG + E+R
Sbjct: 72 ADIES----------TLEIITEMLKYFEERDEDFDVRLLIHQSLAGCVIGKGGQKIKEIR 121
Query: 161 RATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMK 214
G + AP+ D +VQ +G V +A+ + + R+T P+K
Sbjct: 122 DRIGCRFLKVFSNVAPQS---TDRVVQTVGKQSQVIEAVREVITLTRDT--PIK 170
>gi|344266065|ref|XP_003405101.1| PREDICTED: poly(rC)-binding protein 2-like isoform 2 [Loxodonta
africana]
Length = 293
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 84/191 (43%), Gaps = 39/191 (20%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIA-DILPDSEERIVVISARENSEMR 108
V +L+ + GSLIGKGG ++ + TGA +++A D+LP+S ER + I+ S +
Sbjct: 98 VTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGIPQSIIE 157
Query: 109 HSPAQDAVM------------------RVHSRIAE----------IGFEPG-----QAVV 135
VM ++H + GF G Q
Sbjct: 158 CVKQICVVMLEAYTIQGQYAIPQPDLTKLHQLAMQQSHFPMTHGNTGFSAGLDASAQTTS 217
Query: 136 ARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSV 195
L + + IGC++GR G ++E+R+ +GA I++ P GS D V + G+ S+
Sbjct: 218 HELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIAN----PVEGST-DRQVTITGSAASI 272
Query: 196 QDALFHITSRL 206
A + I RL
Sbjct: 273 SLAQYLINVRL 283
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 66/124 (53%), Gaps = 8/124 (6%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMRH 109
+ +LL H +VGS+IGK G V+ + E+GA I I++ + ERI+ ++ N+ +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISE--GNCPERIITLAGPTNAIFKA 71
Query: 110 SPAQDAVMRVHSRIAEIGFEPGQA----VVARLLVHSQQIGCLLGRGGHIVSEMRRATGA 165
+ ++ I+ A V RL+V + Q G L+G+GG + E+R +TGA
Sbjct: 72 FAM--IIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGA 129
Query: 166 SIRV 169
++V
Sbjct: 130 QVQV 133
Score = 42.4 bits (98), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 40/66 (60%)
Query: 350 STTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATEGVVMVSGTSDQMRA 409
+T+ E+ IP + + G + ++ IRQ+SGA + + +P G+T+ V ++G++ +
Sbjct: 215 TTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTITGSAASISL 274
Query: 410 AQSLIH 415
AQ LI+
Sbjct: 275 AQYLIN 280
>gi|6006748|gb|AAF00596.1|AF142631_1 hnRNP K protein homolog [Drosophila melanogaster]
Length = 490
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 80/174 (45%), Gaps = 20/174 (11%)
Query: 41 RNRMFYEEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVIS 100
RNR EE V ++L G++IGKGG ++ + + A++ + D ER + IS
Sbjct: 17 RNR--RNEETV-RILIPSSIAGAVIGKGGQHIQKMRTQYKATVSVDD--SQGPERTIQIS 71
Query: 101 ARENSEMRHSPAQDAVMRVHSRIAEIGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSEMR 160
A S + + + + + E + RLL+H GC++G+GG + E+R
Sbjct: 72 ADIES----------TLEIITEMLKYFEERDEDFDVRLLIHQSLAGCVIGKGGQKIKEIR 121
Query: 161 RATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMK 214
G + AP+ D +VQ +G V +A+ + + R+T P+K
Sbjct: 122 DRIGCRFLKVFSNVAPQS---TDRVVQTVGKQSQVIEAVREVITLTRDT--PIK 170
>gi|45552765|ref|NP_995907.1| bancal, isoform A [Drosophila melanogaster]
gi|442624312|ref|NP_001261102.1| bancal, isoform F [Drosophila melanogaster]
gi|21626883|gb|AAF57450.2| bancal, isoform A [Drosophila melanogaster]
gi|189182182|gb|ACD81867.1| LP16172p [Drosophila melanogaster]
gi|440214543|gb|AGB93634.1| bancal, isoform F [Drosophila melanogaster]
Length = 496
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 80/174 (45%), Gaps = 20/174 (11%)
Query: 41 RNRMFYEEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVIS 100
RNR EE V ++L G++IGKGG ++ + + A++ + D ER + IS
Sbjct: 17 RNR--RNEETV-RILIPSSIAGAVIGKGGQHIQKMRTQYKATVSVDD--SQGPERTIQIS 71
Query: 101 ARENSEMRHSPAQDAVMRVHSRIAEIGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSEMR 160
A S + + + + + E + RLL+H GC++G+GG + E+R
Sbjct: 72 ADIES----------TLEIITEMLKYFEERDEDFDVRLLIHQSLAGCVIGKGGQKIKEIR 121
Query: 161 RATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMK 214
G + AP+ D +VQ +G V +A+ + + R+T P+K
Sbjct: 122 DRIGCRFLKVFSNVAPQS---TDRVVQTVGKQSQVIEAVREVITLTRDT--PIK 170
>gi|195585141|ref|XP_002082349.1| GD11524 [Drosophila simulans]
gi|194194358|gb|EDX07934.1| GD11524 [Drosophila simulans]
Length = 496
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 77/169 (45%), Gaps = 18/169 (10%)
Query: 41 RNRMFYEEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVIS 100
RNR EE V ++L G++IGKGG ++ + + A++ + D ER + IS
Sbjct: 17 RNR--RNEETV-RILIPSSIAGAVIGKGGQHIQKMRTQYKATVSVDD--SQGPERTIQIS 71
Query: 101 ARENSEMRHSPAQDAVMRVHSRIAEIGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSEMR 160
A S + + + + + E + RLL+H GC++G+GG + E+R
Sbjct: 72 ADIES----------TLEIITEMLKYFEERDEDFDVRLLIHQSLAGCVIGKGGQKIKEIR 121
Query: 161 RATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRET 209
G + AP+ D +VQ +G V +A+ + + R+T
Sbjct: 122 DRIGCRFLKVFSNVAPQS---TDRVVQTVGKQSQVIEAVREVITLTRDT 167
>gi|194383878|dbj|BAG59297.1| unnamed protein product [Homo sapiens]
Length = 300
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 81/157 (51%), Gaps = 13/157 (8%)
Query: 46 YEEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADIL-PDSEERIVVISAREN 104
Y E+ + L VG++IGK G+ ++ GASIKIA PD ER+V+I+
Sbjct: 125 YPEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITGPPE 184
Query: 105 SEMRHSPAQDAVMRVHSRIAEIG-FEPGQAVV--ARLLVHSQQIGCLLGRGGHIVSEMRR 161
++ + A R+ ++ E F P + V A + V S G ++G+GG V+E++
Sbjct: 185 AQFK------AQGRIFGKLKEENFFNPKEEVKLEAHIRVPSSTAGRVIGKGGKTVNELQN 238
Query: 162 ATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDA 198
T A + + P+ Q P + IV++IG++ + Q A
Sbjct: 239 LTSAEV-IVPRGQTP--DENEEVIVRIIGHFFASQTA 272
>gi|432895613|ref|XP_004076075.1| PREDICTED: RNA-binding protein Nova-1-like isoform 1 [Oryzias
latipes]
Length = 503
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 81/192 (42%), Gaps = 37/192 (19%)
Query: 41 RNRMFYEEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIA---DILPDSEERIV 97
R E E K+L GS+IGKGG + Q ETGA+IK++ D P + ER+
Sbjct: 56 RTNTGEEGEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVC 115
Query: 98 VISARENSEMRHSPAQDAVMRVHSRIAE---------------------IGFEPGQAVVA 136
+I +A+ VH+ IAE P + A
Sbjct: 116 LIQG----------TVEALNSVHNFIAEKVREMPQSAQKPEPVSILQPQTTVNPDRVKQA 165
Query: 137 RLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQ 196
+L+V + G ++G+GG V + +GA +++ Q P + + +V + G +
Sbjct: 166 KLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQL---SQKPEGINLQERVVTISGEPEQNR 222
Query: 197 DALFHITSRLRE 208
A+ I +++E
Sbjct: 223 KAVEIIVQKIQE 234
>gi|383863653|ref|XP_003707294.1| PREDICTED: RNA-binding protein Nova-2-like isoform 1 [Megachile
rotundata]
Length = 514
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 80/170 (47%), Gaps = 18/170 (10%)
Query: 52 FKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIA---DILPDSEERIVVISARENSEM- 107
K+L G++IGKGG + Q +TGA +KI+ D P + ER+ +I+ + M
Sbjct: 47 LKVLVPGVAAGAIIGKGGDTIAQLQKDTGAKVKISKSHDFYPGTTERVCLITGSLEAIMA 106
Query: 108 ---------RHSPAQDAVMRVHSRIAEIGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSE 158
R P V S + E + V ++LV + G ++G+ G+ + +
Sbjct: 107 VMDFIMDKIREKPDLTLKTTVDSESGKTTAERDKQV--KILVPNSTAGMIIGKAGNYIKQ 164
Query: 159 MRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRE 208
++ +G+ +++ Q + S + + VIG + ++AL I +++ +
Sbjct: 165 IKEESGSYVQI---SQKAKDVSLQERCITVIGEKENNRNALMMILAKVAD 211
>gi|198458337|ref|XP_002138531.1| GA24337 [Drosophila pseudoobscura pseudoobscura]
gi|198136305|gb|EDY69089.1| GA24337 [Drosophila pseudoobscura pseudoobscura]
Length = 505
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 76/169 (44%), Gaps = 18/169 (10%)
Query: 41 RNRMFYEEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVIS 100
RNR E ++L G++IGKGG ++ + + A++ + D ER + IS
Sbjct: 17 RNR---RNEDTVRILIPSSIAGAVIGKGGQHIQKMRTQYKAAVSVDD--SQGPERTIQIS 71
Query: 101 ARENSEMRHSPAQDAVMRVHSRIAEIGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSEMR 160
A +A + + + + + E + RLL+H GC++G+GG + E+R
Sbjct: 72 A----------DIEATLEIITEMLKYFEERDEDFDVRLLIHQSLAGCVIGKGGQKIKEIR 121
Query: 161 RATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRET 209
G + AP+ D +VQ +G V +A+ + + R+T
Sbjct: 122 DRIGCRFLKVFSNVAPQS---TDRVVQTVGKQAQVIEAVREVITLTRDT 167
>gi|260064185|gb|ACX30053.1| MIP13670p [Drosophila melanogaster]
Length = 346
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 83/170 (48%), Gaps = 20/170 (11%)
Query: 52 FKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIA---DILPDSEERIVVISARENSEM- 107
K+L G++IGKGG + + Q +TGA +K++ D P + ER+ +I+ + M
Sbjct: 148 MKILVPAVASGAIIGKGGETIASLQKDTGARVKMSKSHDFYPGTTERVCLITGSTEAIMV 207
Query: 108 ---------RHSPAQDAVMRVHSRIAEIGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSE 158
R P D ++ ++ E + V ++LV + G ++G+GG + +
Sbjct: 208 VMEFIMDKIREKP--DLTNKIVDTDSKQTQERDKQV--KILVPNSTAGMIIGKGGAFIKQ 263
Query: 159 MRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRE 208
++ +G+ +++ Q P S + + +IG+ + ++A I S++ E
Sbjct: 264 IKEESGSYVQI---SQKPTDVSLQERCITIIGDKENNKNACKMILSKIVE 310
>gi|224001814|ref|XP_002290579.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220974001|gb|EED92331.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 649
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 56/109 (51%), Gaps = 2/109 (1%)
Query: 61 VGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMRHSPAQDAVMRVH 120
VG +IGKGG ++R Q +G I + +P+ RI+ N+ + H
Sbjct: 244 VGRVIGKGGEMIRDLQARSGCRIDVDQNVPEGAPRIITYRGTRNAIDFAKQLISILCTEH 303
Query: 121 SRIAEIGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRV 169
+ AE+ GQA+ +LV S IG ++GRGG ++ E++ + A I+V
Sbjct: 304 GKEAELPL--GQAMKKLVLVPSTVIGKIIGRGGEMIRELQSKSMAKIQV 350
>gi|125558153|gb|EAZ03689.1| hypothetical protein OsI_25823 [Oryza sativa Indica Group]
Length = 610
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 67/321 (20%), Positives = 130/321 (40%), Gaps = 42/321 (13%)
Query: 127 GFEPGQAVVA---RLLVHSQQIGCLLGRGGHIVSEMRRATGASI-----------RVFPK 172
G E + V+ RLL G L+G+ G ++ + +GAS+ R
Sbjct: 299 GIEQTECVMQFSFRLLCPVTLAGGLIGKNGMVIKAIEVNSGASVDVGGPVHRCMERAITV 358
Query: 173 DQAPRCGSPHDEI----------VQVIGNYHSVQDALFHITSRLRETIFPMKRPGPNNGH 222
+ G + +Q+ G +V+DAL + +LR F ++ +NGH
Sbjct: 359 SALEKPGQKFSMVENAVLRIFDRMQITGEPMNVRDALSLVCEKLRNHCFSSEKTTYSNGH 418
Query: 223 SYLPPFPEMPPPPFRPRHNPASPGSYPSPVGPFHSMDRGMGPSQPFDHQAAFS-HGMDPM 281
E+ + N +S G Y + G +D + ++ Q + S + +
Sbjct: 419 VPSSAIDELTTS---SQVNISSTGQYSA--GNLSRVDHRLSQNEIDSVQNSISAFDLGCL 473
Query: 282 VPPNSDRIPFPYGSERPGHGPTFDRPPSPRSWTPQGVGGG--DPRGFDASS--GFTPRNR 337
P + G+E ++P + + G + G D S+ + +
Sbjct: 474 GSPQIQKPTIGCGTEINNPINEVEKPANGNGTGINNLNTGMQNENGIDVSNHGATSLEEK 533
Query: 338 PVESGNHAAILTSTTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATEGV 397
+ G A +T T EV V G+N ++ + IR++SGA+V + P P ++G+
Sbjct: 534 KLLRGIKTATITRITYEVA--------VCGDNGNDFTMIREMSGADVTAHYPLPETSDGM 585
Query: 398 VMVSGTSDQMRAAQSLIHAFI 418
+++SGT D+ ++A ++ +
Sbjct: 586 IVISGTPDEAQSALAMFLDLV 606
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 61/126 (48%), Gaps = 4/126 (3%)
Query: 8 YPPAAEPFHQRGYAPGYHSRGYSSGPGHETVGGRNRMFYEEEVV---FKLLCHLDKVGSL 64
+P EP Y+ R +S P + G + E V+ F+LLC + G L
Sbjct: 264 FPKVPEPEMGSLYSDMSTERANTSIPHIDCPQGATGIEQTECVMQFSFRLLCPVTLAGGL 323
Query: 65 IGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMRHSPAQDAVMRVHSRIA 124
IGK G +++ + +GAS+ + + ER + +SA E + S ++AV+R+ R+
Sbjct: 324 IGKNGMVIKAIEVNSGASVDVGGPVHRCMERAITVSALEKPGQKFSMVENAVLRIFDRM- 382
Query: 125 EIGFEP 130
+I EP
Sbjct: 383 QITGEP 388
>gi|157108094|ref|XP_001650073.1| heterogeneous nuclear ribonucleoprotein k [Aedes aegypti]
gi|108868581|gb|EAT32806.1| AAEL014959-PA [Aedes aegypti]
Length = 430
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 85/180 (47%), Gaps = 23/180 (12%)
Query: 47 EEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSE 106
EEEV +LL G++IGK G ++ + E A + + D ER++ I + E
Sbjct: 37 EEEV--RLLIPSKMAGAIIGKAGHNIQKLRTEYQAQVNVGDCT--GPERVLTIGG--DME 90
Query: 107 MRHSPAQDAVMRVHSRIAEIGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGAS 166
+ +D VM+ + E +E R+LVH GC++GRGG + E++ G
Sbjct: 91 TITNVVKD-VMKHLDKAGENEYE------LRILVHQSLAGCVIGRGGTKIKELKDQIGCR 143
Query: 167 IRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKRPGPNNGHSYLP 226
+++F + AP+ D I QVIG AL I ++ T P+K P H+Y P
Sbjct: 144 LKIFS-NIAPQ---STDRIAQVIGTEDQCLTALNDIIGLIQGT--PIKGP----VHNYDP 193
>gi|194903195|ref|XP_001980824.1| GG16798 [Drosophila erecta]
gi|190652527|gb|EDV49782.1| GG16798 [Drosophila erecta]
Length = 572
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 84/170 (49%), Gaps = 20/170 (11%)
Query: 52 FKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIA---DILPDSEERIVVISARENSEM- 107
K+L G++IGKGG + + Q +TGA +K++ D P + ER+ +I+ + M
Sbjct: 68 MKILVPAVASGAIIGKGGETIASLQKDTGARVKMSKSHDFYPGTTERVCLITGSTEAIMV 127
Query: 108 ---------RHSPAQDAVMRVHSRIAEIGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSE 158
R P D ++ ++ E + V ++LV + G ++G+GG + +
Sbjct: 128 VLEFIMDKIREKP--DLTNKIVDAESKQTQERDKQV--KILVPNSTAGMIIGKGGAFIKQ 183
Query: 159 MRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRE 208
++ +G+ +++ Q P+ S + + +IG+ + ++A I S++ E
Sbjct: 184 IKEESGSYVQI---SQKPKDVSLQERCITIIGDKENNKNACKMILSKIVE 230
>gi|449281891|gb|EMC88850.1| Poly(rC)-binding protein 3 [Columba livia]
Length = 330
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 96/390 (24%), Positives = 154/390 (39%), Gaps = 97/390 (24%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRT--FQNETGASIKIADILPDSEERIVVISARENSEM 107
+ +LL H +VGS+IGK ++ F ++GA I I++ + ERIV I+
Sbjct: 14 LTIRLLMHGKEVGSIIGKVRMSFKSLPFSFQSGARINISE--GNCPERIVTITG------ 65
Query: 108 RHSPAQDAVMRVHSRIAEIGFEPGQA-------------VVARLLVHSQQIGCLLGRGGH 154
DA+ + + IA FE V RL+V + Q G L+G+GG
Sbjct: 66 ----PTDAIFKAFAMIA-YKFEEDITNSMSNSTATSKPPVTLRLVVPASQCGSLIGKGGS 120
Query: 155 IVSEMRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMK 214
+ E+R +TGA ++V D P + + V + G ++ + I + E+
Sbjct: 121 KIKEIRESTGAQVQV-AGDMLP---NSTERAVTISGTPDAIIQCVKQICVVMLES----- 171
Query: 215 RPGPNNGHSYLPPFPEMPPPPFRPRHNPASPGSYPSPV----GPFHSMDRGMGPSQPFD- 269
P G + P+RP+ PAS +PV G +++ P
Sbjct: 172 ---PPKGATI----------PYRPK--PAS-----TPVIFAGGQAYTIQGQYAIPHPDQL 211
Query: 270 ---HQAAFSHGMDPMVPPNSDRIPFPYGSERPGHGPTFDRPPSPRSWTPQGVGGGDPRGF 326
HQ A P P FP G + P H S Q + G G
Sbjct: 212 TKLHQLAMQQ--TPFTPLGQTTPAFP-GEKLPLHS----------SEEAQNL-MGQSSGL 257
Query: 327 DASSGFTPRNRPVESGNHAAILTSTTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVV 386
DAS P S + I P + + G + ++ IRQ+SGA + +
Sbjct: 258 DAS--------PPASTHELTI----------PNDLIGCIIGRQGTKINEIRQMSGAQIKI 299
Query: 387 NDPKPGATEGVVMVSGTSDQMRAAQSLIHA 416
+ G++E + ++GT + AQ LI+A
Sbjct: 300 ANATEGSSERQITITGTPANISLAQYLINA 329
>gi|8699624|gb|AAF78762.1|AF275629_1 bancal protein [Drosophila melanogaster]
Length = 508
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 77/169 (45%), Gaps = 18/169 (10%)
Query: 41 RNRMFYEEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVIS 100
RNR EE V ++L G++IGKGG ++ + + A++ + D ER + IS
Sbjct: 17 RNR--RSEETV-RILIPSSIAGAVIGKGGQHIQKMRTQYKATVSVDD--SQGPERTIQIS 71
Query: 101 ARENSEMRHSPAQDAVMRVHSRIAEIGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSEMR 160
A S + + + + + E + RLL+H GC++G+GG + E+R
Sbjct: 72 ADIES----------TLEIITEMLKYFEERDEDFDVRLLIHQSLAGCVIGKGGQKIKEIR 121
Query: 161 RATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRET 209
G + AP+ D +VQ +G V +A+ + + R+T
Sbjct: 122 DRIGCRFLKVFSNVAPQS---TDRVVQTVGKQSQVIEAVREVITLTRDT 167
>gi|297741005|emb|CBI31317.3| unnamed protein product [Vitis vinifera]
Length = 390
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 74/150 (49%), Gaps = 13/150 (8%)
Query: 59 DKVGSLIGKGGSIVRTFQNETGASIKI---ADILPDSEER-IVVISARENSEMRHSPAQD 114
+KVG LIGK G +R Q +GA I+I AD P S R + +I + EN +D
Sbjct: 185 NKVGVLIGKAGDTIRFLQYNSGAKIQITRDADADPYSASRPVELIGSLENINKAEKLIKD 244
Query: 115 AVMRVHS----RIAEIGFEPGQAVVA----RLLVHSQQIGCLLGRGGHIVSEMRRATGAS 166
+ + + GF QAV A ++ V ++++G ++G+GG + ++ +GA
Sbjct: 245 VIAEADAGGSPSLVARGFATAQAVGAAEQVQIQVPNEKVGLIIGKGGETIKSLQTRSGAR 304
Query: 167 IRVFPKDQAPRCGSPHDEIVQVIGNYHSVQ 196
I++ P+ P + V+V G+ ++
Sbjct: 305 IQLIPQ-HLPEGDQSKERTVRVTGDKKQIE 333
>gi|45552763|ref|NP_995906.1| bancal, isoform C [Drosophila melanogaster]
gi|45445681|gb|AAM68389.2| bancal, isoform C [Drosophila melanogaster]
gi|261338783|gb|ACX70073.1| RE05515p [Drosophila melanogaster]
Length = 502
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 77/169 (45%), Gaps = 18/169 (10%)
Query: 41 RNRMFYEEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVIS 100
RNR EE V ++L G++IGKGG ++ + + A++ + D ER + IS
Sbjct: 23 RNR--RNEETV-RILIPSSIAGAVIGKGGQHIQKMRTQYKATVSVDD--SQGPERTIQIS 77
Query: 101 ARENSEMRHSPAQDAVMRVHSRIAEIGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSEMR 160
A S + + + + + E + RLL+H GC++G+GG + E+R
Sbjct: 78 ADIES----------TLEIITEMLKYFEERDEDFDVRLLIHQSLAGCVIGKGGQKIKEIR 127
Query: 161 RATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRET 209
G + AP+ D +VQ +G V +A+ + + R+T
Sbjct: 128 DRIGCRFLKVFSNVAPQS---TDRVVQTVGKQSQVIEAVREVITLTRDT 173
>gi|328784994|ref|XP_003250531.1| PREDICTED: RNA-binding protein Nova-2-like [Apis mellifera]
Length = 514
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 83/175 (47%), Gaps = 28/175 (16%)
Query: 52 FKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIA---DILPDSEERIVVISARENSEMR 108
K+L G++IGKGG + Q +TGA +K++ D P + ER+ +I+ + M
Sbjct: 47 LKVLVPGVAAGAIIGKGGDTIAQLQKDTGARVKMSKSHDFYPGTTERVCLITGSLEAIM- 105
Query: 109 HSPAQDAVMR-VHSRIAE---------IGFEPGQAVVAR-----LLVHSQQIGCLLGRGG 153
AVM + +I E + FE G+ R +LV + G ++G+ G
Sbjct: 106 ------AVMDFIMDKIREKPDLTLKTTVDFESGKTTAERDKQVKILVPNSTAGMIIGKAG 159
Query: 154 HIVSEMRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRE 208
+ + +++ G+ +++ Q + S + + VIG + ++AL I +++ +
Sbjct: 160 NYIKQIKEECGSYVQI---SQKAKDVSLQERCITVIGEKENNRNALMMILAKVAD 211
>gi|380026049|ref|XP_003696774.1| PREDICTED: RNA-binding protein Nova-2-like isoform 1 [Apis florea]
Length = 514
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 83/175 (47%), Gaps = 28/175 (16%)
Query: 52 FKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIA---DILPDSEERIVVISARENSEMR 108
K+L G++IGKGG + Q +TGA +K++ D P + ER+ +I+ + M
Sbjct: 47 LKVLVPGVAAGAIIGKGGDTIAQLQKDTGARVKMSKSHDFYPGTTERVCLITGSLEAIM- 105
Query: 109 HSPAQDAVMR-VHSRIAE---------IGFEPGQAVVAR-----LLVHSQQIGCLLGRGG 153
AVM + +I E + FE G+ R +LV + G ++G+ G
Sbjct: 106 ------AVMDFIMDKIREKPDLTLKTTVDFESGKTTAERDKQVKILVPNSTAGMIIGKAG 159
Query: 154 HIVSEMRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRE 208
+ + +++ G+ +++ Q + S + + VIG + ++AL I +++ +
Sbjct: 160 NYIKQIKEECGSYVQI---SQKAKDVSLQERCITVIGEKENNRNALMMILAKVAD 211
>gi|161078118|ref|NP_001036691.1| pasilla, isoform I [Drosophila melanogaster]
gi|113194762|gb|ABI31151.1| pasilla, isoform I [Drosophila melanogaster]
Length = 519
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 83/170 (48%), Gaps = 20/170 (11%)
Query: 52 FKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIA---DILPDSEERIVVISARENSEM- 107
K+L G++IGKGG + + Q +TGA +K++ D P + ER+ +I+ + M
Sbjct: 79 MKILVPAVASGAIIGKGGETIASLQKDTGARVKMSKSHDFYPGTTERVCLITGSTEAIMV 138
Query: 108 ---------RHSPAQDAVMRVHSRIAEIGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSE 158
R P D ++ ++ E + V ++LV + G ++G+GG + +
Sbjct: 139 VMEFIMDKIREKP--DLTNKIVDTDSKQTQERDKQV--KILVPNSTAGMIIGKGGAFIKQ 194
Query: 159 MRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRE 208
++ +G+ +++ Q P S + + +IG+ + ++A I S++ E
Sbjct: 195 IKEESGSYVQI---SQKPTDVSLQERCITIIGDKENNKNACKMILSKIVE 241
>gi|113677906|ref|NP_001038254.1| neuro-oncological ventral antigen 1 [Danio rerio]
gi|213624727|gb|AAI71499.1| Neuro-oncological ventral antigen 1 [Danio rerio]
gi|213627516|gb|AAI71495.1| Neuro-oncological ventral antigen 1 [Danio rerio]
Length = 495
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 82/192 (42%), Gaps = 37/192 (19%)
Query: 41 RNRMFYEEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIA---DILPDSEERIV 97
R+ E E K+L GS+IGKGG + Q ETGA+IK++ D P + ER+
Sbjct: 48 RSNTGEEGEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVC 107
Query: 98 VISARENSEMRHSPAQDAVMRVHSRIAE---------------------IGFEPGQAVVA 136
+I +A+ VH+ IAE P + A
Sbjct: 108 LIQG----------TVEALNGVHNFIAEKVREMPQSSQKTEPVSILQPQTTVNPDRIKQA 157
Query: 137 RLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQ 196
+L+V + G ++G+GG V + +GA +++ Q P + + +V V G +
Sbjct: 158 KLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQL---SQKPEGINLQERVVTVSGEPEQNR 214
Query: 197 DALFHITSRLRE 208
A+ I +++E
Sbjct: 215 KAVEIIVQKIQE 226
>gi|260814700|ref|XP_002602052.1| hypothetical protein BRAFLDRAFT_127356 [Branchiostoma floridae]
gi|229287357|gb|EEN58064.1| hypothetical protein BRAFLDRAFT_127356 [Branchiostoma floridae]
Length = 499
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 63/127 (49%), Gaps = 10/127 (7%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSE--- 106
V ++L G++IGK G ++ ++E A++ + D ERI+ ISA N+
Sbjct: 43 VDLRILLQSKNAGAIIGKQGLNIKRLRSEYKATVTVPDCT--GPERILTISADLNTACAC 100
Query: 107 -MRHSPAQDAVMRVHSRIAEIGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGA 165
+ P + + + ++ F R+LVH Q GC++GR G + E+R T A
Sbjct: 101 LLDIIPVLEDYQKHYQEHKDLNFN----CELRMLVHQSQAGCIIGRAGFKIKELREQTEA 156
Query: 166 SIRVFPK 172
+I+V+ +
Sbjct: 157 NIKVYSE 163
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 40/65 (61%)
Query: 351 TTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATEGVVMVSGTSDQMRAA 410
T+ +V IP+ + G S + IR+ S A + +++P PG+T+ ++ +SG +DQ+R A
Sbjct: 408 TSTQVTIPKELAGSIIGRGGSRIRTIRERSEAQIKIDEPLPGSTDRIITISGDNDQIRNA 467
Query: 411 QSLIH 415
Q L+
Sbjct: 468 QFLLQ 472
Score = 43.9 bits (102), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 35/49 (71%), Gaps = 1/49 (2%)
Query: 62 GSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMRHS 110
GS+IG+GGS +RT + + A IKI + LP S +RI+ IS +N ++R++
Sbjct: 420 GSIIGRGGSRIRTIRERSEAQIKIDEPLPGSTDRIITISG-DNDQIRNA 467
>gi|28317389|tpe|CAD29864.1| TPA: hnRNP-E2 b [Xenopus laevis]
Length = 319
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 66/122 (54%), Gaps = 4/122 (3%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMR- 108
+ +LL H +VGS+IGK G V+ + E+GA I I++ + ERI+ ++ N+ +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISE--GNCPERIITLAGPTNAIFKA 71
Query: 109 HSPAQDAVMR-VHSRIAEIGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASI 167
S D + + S + V RL+V + Q G L+G+GG + E+R +TGA +
Sbjct: 72 FSMIIDKLEEDISSSMTNSTASSKPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQV 131
Query: 168 RV 169
+V
Sbjct: 132 QV 133
Score = 44.7 bits (104), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 34/52 (65%), Gaps = 1/52 (1%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIA-DILPDSEERIVVIS 100
V +L+ + GSLIGKGG ++ + TGA +++A D+LP+S ER + I+
Sbjct: 98 VTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIA 149
Score = 41.6 bits (96), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 42/75 (56%)
Query: 341 SGNHAAILTSTTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATEGVVMV 400
SG A +T+ E+ IP + + G + ++ IRQ+SGA + + +P G+ + V +
Sbjct: 232 SGGIDASAQATSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSNDRQVTI 291
Query: 401 SGTSDQMRAAQSLIH 415
+G++ + AQ LI+
Sbjct: 292 TGSTASISLAQYLIN 306
>gi|340714094|ref|XP_003395567.1| PREDICTED: RNA-binding protein Nova-2-like [Bombus terrestris]
gi|350427987|ref|XP_003494948.1| PREDICTED: RNA-binding protein Nova-2-like [Bombus impatiens]
Length = 514
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 83/175 (47%), Gaps = 28/175 (16%)
Query: 52 FKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIA---DILPDSEERIVVISARENSEMR 108
K+L G++IGKGG + Q +TGA +K++ D P + ER+ +I+ + M
Sbjct: 47 LKVLVPGVAAGAIIGKGGDTIAQLQKDTGARVKMSKSHDFYPGTTERVCLITGSLEAIM- 105
Query: 109 HSPAQDAVMR-VHSRIAE---------IGFEPGQAVVAR-----LLVHSQQIGCLLGRGG 153
AVM + +I E + FE G+ R +LV + G ++G+ G
Sbjct: 106 ------AVMDFIMDKIREKPDLTLKTTVDFESGKTTAERDKQVKILVPNSTAGMIIGKAG 159
Query: 154 HIVSEMRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRE 208
+ + +++ G+ +++ Q + S + + VIG + ++AL I +++ +
Sbjct: 160 NYIKQIKEECGSYVQI---SQKAKDVSLQERCITVIGEKENNRNALMMILAKVAD 211
>gi|159476646|ref|XP_001696422.1| C1, subunit of the circadian RNA-binding protein CHLAMY 1
[Chlamydomonas reinhardtii]
gi|158282647|gb|EDP08399.1| C1, subunit of the circadian RNA-binding protein CHLAMY 1
[Chlamydomonas reinhardtii]
Length = 511
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 77/173 (44%), Gaps = 31/173 (17%)
Query: 49 EVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMR 108
E L C VG +IG+GG +RT Q +GA I + P+ R + IS
Sbjct: 200 EAQKTLECPQGIVGRVIGRGGETIRTLQQASGAHILVNQDFPEGAARQITISG------- 252
Query: 109 HSPAQDAVMRVHSRIAE-IGFEPGQA--VVARLLVHSQQ--------IGCLLGRGGHIVS 157
+QDAV R S + E IG E VV R V S + +G ++G+GG +
Sbjct: 253 ---SQDAVDRAASMVQELIGGEHANTSQVVQRFGVGSTEVLECPKTMVGRIIGKGGETIK 309
Query: 158 EMRRATGASIRVFPKDQAPR-CGSPHDEIVQVIGNYHSVQDALFHITSRLRET 209
++++ ASI++ DQ+ C V + G H++ A I +R T
Sbjct: 310 DLQKRFNASIQI---DQSAMPCK------VTITGPSHTIASARRAIEDLIRST 353
Score = 46.6 bits (109), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 81/162 (50%), Gaps = 24/162 (14%)
Query: 54 LLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMRHSPAQ 113
++C DKVG +IG+ G+ +R + TG I++ P ++ V IS R + R A+
Sbjct: 126 IMCPPDKVGRVIGRAGATIRDLEASTGTRIQVDHKAPG--DKPVTISGRADEVER---AK 180
Query: 114 DAVMRVHS-RIAEIGFEPGQAVVARLLVHSQQI-GCLLGRGGHIVSEMRRATGASIRV-- 169
V+ + S ++ PG+A + L Q I G ++GRGG + +++A+GA I V
Sbjct: 181 RQVLDLISGHGSDAAPAPGEA--QKTLECPQGIVGRVIGRGGETIRTLQQASGAHILVNQ 238
Query: 170 -FPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETI 210
FP+ A + + + G+ QDA+ S ++E I
Sbjct: 239 DFPEGAARQ--------ITISGS----QDAVDRAASMVQELI 268
>gi|383863655|ref|XP_003707295.1| PREDICTED: RNA-binding protein Nova-2-like isoform 2 [Megachile
rotundata]
Length = 535
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/160 (23%), Positives = 77/160 (48%), Gaps = 18/160 (11%)
Query: 62 GSLIGKGGSIVRTFQNETGASIKIA---DILPDSEERIVVISARENSEM----------R 108
G++IGKGG + Q +TGA +KI+ D P + ER+ +I+ + M R
Sbjct: 78 GAIIGKGGDTIAQLQKDTGAKVKISKSHDFYPGTTERVCLITGSLEAIMAVMDFIMDKIR 137
Query: 109 HSPAQDAVMRVHSRIAEIGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIR 168
P V S + E + V ++LV + G ++G+ G+ + +++ +G+ ++
Sbjct: 138 EKPDLTLKTTVDSESGKTTAERDKQV--KILVPNSTAGMIIGKAGNYIKQIKEESGSYVQ 195
Query: 169 VFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRE 208
+ Q + S + + VIG + ++AL I +++ +
Sbjct: 196 I---SQKAKDVSLQERCITVIGEKENNRNALMMILAKVAD 232
>gi|198433420|ref|XP_002121389.1| PREDICTED: similar to neuro-oncological ventral antigen 1 [Ciona
intestinalis]
Length = 543
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/170 (22%), Positives = 84/170 (49%), Gaps = 19/170 (11%)
Query: 49 EVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIA---DILPDSEERIVVISARENS 105
+++ K+L G++IGKGG I+ Q ++GA IK++ D P +++R+V+I
Sbjct: 46 QLILKVLIPGYAAGAVIGKGGQIIVQLQKDSGAIIKLSKAKDFYPGTQDRVVLIQGTAEG 105
Query: 106 EMRHSPAQDAVM-RVH------SRIAEIGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSE 158
M+ Q+ ++ +V+ A IG P Q +++V + G ++G+ G +
Sbjct: 106 LMK---VQNTIIEKVYEFPVPKDLAAIIGDRPKQ---VKIIVPNTTAGLVIGKAGATIKT 159
Query: 159 MRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRE 208
+ +G+ +++ Q P + + ++ + G H + A I ++++
Sbjct: 160 IMEESGSKVQL---SQKPDGVNVQERVITIKGEKHQLMTASNIIIDKIKD 206
>gi|380026051|ref|XP_003696775.1| PREDICTED: RNA-binding protein Nova-2-like isoform 2 [Apis florea]
Length = 522
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 83/175 (47%), Gaps = 28/175 (16%)
Query: 52 FKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIA---DILPDSEERIVVISARENSEMR 108
K+L G++IGKGG + Q +TGA +K++ D P + ER+ +I+ + M
Sbjct: 47 LKVLVPGVAAGAIIGKGGDTIAQLQKDTGARVKMSKSHDFYPGTTERVCLITGSLEAIM- 105
Query: 109 HSPAQDAVMR-VHSRIAE---------IGFEPGQAVVAR-----LLVHSQQIGCLLGRGG 153
AVM + +I E + FE G+ R +LV + G ++G+ G
Sbjct: 106 ------AVMDFIMDKIREKPDLTLKTTVDFESGKTTAERDKQVKILVPNSTAGMIIGKAG 159
Query: 154 HIVSEMRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRE 208
+ + +++ G+ +++ Q + S + + VIG + ++AL I +++ +
Sbjct: 160 NYIKQIKEECGSYVQI---SQKAKDVSLQERCITVIGEKENNRNALMMILAKVAD 211
>gi|118486946|gb|ABK95306.1| unknown [Populus trichocarpa]
Length = 313
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 82/166 (49%), Gaps = 8/166 (4%)
Query: 47 EEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIA---DILPDSEERIVVISARE 103
E+ KLL GS+IGKGG+ + FQ+++GA I+++ + P + +RI++IS
Sbjct: 32 EKPTYIKLLVSNAAAGSVIGKGGATITDFQSQSGARIQLSKNYEFFPGTSDRIILISGGI 91
Query: 104 NSEMRHSPAQDAVMRVHSRI-AEIGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRA 162
+ ++ + + ++ S I E G + + RL+V + G ++G+GG I+
Sbjct: 92 DDALK--ALELIIAKLLSEIPTEDGDDAEPRMRVRLVVPNNACGSIIGKGGSIIKSFIEE 149
Query: 163 TGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRE 208
+ A I++ P D D +V + G A+ I S+L +
Sbjct: 150 SHAGIKISPLD--TDFLGLTDRLVAITGTLEEQMHAIDLILSKLTD 193
>gi|442618214|ref|NP_001262415.1| pasilla, isoform R [Drosophila melanogaster]
gi|440217247|gb|AGB95797.1| pasilla, isoform R [Drosophila melanogaster]
Length = 780
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 83/170 (48%), Gaps = 20/170 (11%)
Query: 52 FKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIA---DILPDSEERIVVISARENSEM- 107
K+L G++IGKGG + + Q +TGA +K++ D P + ER+ +I+ + M
Sbjct: 276 MKILVPAVASGAIIGKGGETIASLQKDTGARVKMSKSHDFYPGTTERVCLITGSTEAIMV 335
Query: 108 ---------RHSPAQDAVMRVHSRIAEIGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSE 158
R P D ++ ++ E + V ++LV + G ++G+GG + +
Sbjct: 336 VMEFIMDKIREKP--DLTNKIVDTDSKQTQERDKQV--KILVPNSTAGMIIGKGGAFIKQ 391
Query: 159 MRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRE 208
++ +G+ +++ Q P S + + +IG+ + ++A I S++ E
Sbjct: 392 IKEESGSYVQI---SQKPTDVSLQERCITIIGDKENNKNACKMILSKIVE 438
>gi|367008424|ref|XP_003678712.1| hypothetical protein TDEL_0A01690 [Torulaspora delbrueckii]
gi|359746369|emb|CCE89501.1| hypothetical protein TDEL_0A01690 [Torulaspora delbrueckii]
Length = 430
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 83/388 (21%), Positives = 156/388 (40%), Gaps = 50/388 (12%)
Query: 35 HETVGGRNRMFYEEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEE 94
HE++ G + V ++LC + + ++G G + + T I ++D + E
Sbjct: 70 HESIDGMDN--SSRHVHLRMLCLVKQASMIVGHKGENISKIKAVTSTRINVSDNVRGVPE 127
Query: 95 RIVVISARENSEMRHSPAQDAVMRVHSRIAEIGFEPGQAVVA--RLLVHSQQIGCLLGRG 152
R+V + R + E V ++ R E G++ G ++++ LL+ +GC++G+
Sbjct: 128 RVVYV--RGSCENVAKAFGMIVRSINDRHGEEGYD-GNSIMSTINLLISHHLMGCIIGKH 184
Query: 153 GHIVSEMRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFP 212
G + E+ + A + P+ + +D I+ + G V DA+ T + +TI
Sbjct: 185 GSRLREIEELSAARLSASPQ----QLIMSNDRILSITG----VADAIHIATFYIGQTIMK 236
Query: 213 MKRPGPNNGHSYLPPFPEMPPPPFRPRHNPASPGSYPSPVGPFHSMDRGMGPSQPFDHQA 272
K + + P P + N AS G Y H P+ + +
Sbjct: 237 CKEAFKSKKAIFYQP-----SPVYSVLVNGASHGGYS------HQKHHQYHPNDKYTNSR 285
Query: 273 AFSHGMDP-MVPPNSDRIPFPYGSERPGHGPTFDRPPSPRSWTPQGVGGGDPRGFDASSG 331
A + P M+ P P + T + S+TP
Sbjct: 286 AGKRVVRPAMMATTPTAQPLPQENNGSQVTYTAAAAANATSFTP---------------S 330
Query: 332 FT-PRNRPVES----GNHAAILTSTTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVV 386
FT P R ++ AI+ EV I + Y+ ++ G+ +++ I++ +G ++ +
Sbjct: 331 FTIPNVRIIDEPAPPAQTMAIIEQ---EVYIDENYVGNIIGKEGKHINSIKEATGCSIYI 387
Query: 387 NDPKPGATEGVVMVSGTSDQMRAAQSLI 414
DP G+ E + V GTS +AA LI
Sbjct: 388 ADPVEGSLERRLTVKGTSMGSQAAIMLI 415
>gi|222636947|gb|EEE67079.1| hypothetical protein OsJ_24052 [Oryza sativa Japonica Group]
Length = 544
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 70/343 (20%), Positives = 136/343 (39%), Gaps = 42/343 (12%)
Query: 105 SEMRHSPAQDAVMRVHSRIAEIGFEPGQAVVA---RLLVHSQQIGCLLGRGGHIVSEMRR 161
S+M A ++ + G E + V+ RLL G L+G+ G ++ +
Sbjct: 211 SDMSTERANTSIPHIDCPQGATGIEQTECVMQFSFRLLCPVTLAGGLIGKNGMVIKAIEV 270
Query: 162 ATGASI-----------RVFPKDQAPRCGSPHDEI----------VQVIGNYHSVQDALF 200
+GAS+ R + G + +Q+ G +V+DAL
Sbjct: 271 NSGASVDVGGPVHRCMERAITVSALEKPGQKFSMVENAVLRIFDRMQITGEPMNVRDALS 330
Query: 201 HITSRLRETIFPMKRPGPNNGHSYLPPFPEMPPPPFRPRHNPASPGSYPSPVGPFHSMDR 260
+ +LR F ++ NGH P + + N +S G Y + G +D
Sbjct: 331 LVCEKLRNHCFSSEKTTYGNGH---VPSSAIDELTTSSQVNISSTGQYSA--GNLSRVDH 385
Query: 261 GMGPSQPFDHQAAFS-HGMDPMVPPNSDRIPFPYGSERPGHGPTFDRPPSPRSWTPQGVG 319
+ ++ Q + S + + P + G+E ++P + +
Sbjct: 386 RLSQNEIDSVQNSISAFDLGCLGSPQIQKPTIGCGTEINNPINEVEKPANGNGTGINNLN 445
Query: 320 GG--DPRGFDASS--GFTPRNRPVESGNHAAILTSTTIEVVIPQLYMAHVYGENNSNLSH 375
G + G D S+ + + + G A +T T EV V G+N ++ +
Sbjct: 446 TGMQNENGIDVSNHGATSLEEKKLLRGIKTATITRITYEVA--------VCGDNGNDFTM 497
Query: 376 IRQISGANVVVNDPKPGATEGVVMVSGTSDQMRAAQSLIHAFI 418
IR++SGA+V + P P ++G++++SGT D+ ++A ++ +
Sbjct: 498 IREMSGADVTAHYPLPETSDGMIVISGTPDEAQSALAMFLDLV 540
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 61/126 (48%), Gaps = 4/126 (3%)
Query: 8 YPPAAEPFHQRGYAPGYHSRGYSSGPGHETVGGRNRMFYEEEVV---FKLLCHLDKVGSL 64
+P EP Y+ R +S P + G + E V+ F+LLC + G L
Sbjct: 198 FPKVPEPEMGSLYSDMSTERANTSIPHIDCPQGATGIEQTECVMQFSFRLLCPVTLAGGL 257
Query: 65 IGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMRHSPAQDAVMRVHSRIA 124
IGK G +++ + +GAS+ + + ER + +SA E + S ++AV+R+ R+
Sbjct: 258 IGKNGMVIKAIEVNSGASVDVGGPVHRCMERAITVSALEKPGQKFSMVENAVLRIFDRM- 316
Query: 125 EIGFEP 130
+I EP
Sbjct: 317 QITGEP 322
>gi|320542558|ref|NP_001189200.1| pasilla, isoform L [Drosophila melanogaster]
gi|318068744|gb|ADV37291.1| pasilla, isoform L [Drosophila melanogaster]
Length = 758
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 83/170 (48%), Gaps = 20/170 (11%)
Query: 52 FKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIA---DILPDSEERIVVISARENSEM- 107
K+L G++IGKGG + + Q +TGA +K++ D P + ER+ +I+ + M
Sbjct: 254 MKILVPAVASGAIIGKGGETIASLQKDTGARVKMSKSHDFYPGTTERVCLITGSTEAIMV 313
Query: 108 ---------RHSPAQDAVMRVHSRIAEIGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSE 158
R P D ++ ++ E + V ++LV + G ++G+GG + +
Sbjct: 314 VMEFIMDKIREKP--DLTNKIVDTDSKQTQERDKQV--KILVPNSTAGMIIGKGGAFIKQ 369
Query: 159 MRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRE 208
++ +G+ +++ Q P S + + +IG+ + ++A I S++ E
Sbjct: 370 IKEESGSYVQI---SQKPTDVSLQERCITIIGDKENNKNACKMILSKIVE 416
>gi|147901405|ref|NP_001084264.1| poly(rC) binding protein 2 [Xenopus laevis]
gi|5459450|emb|CAB50743.1| hnRNP-E2 protein [Xenopus laevis]
Length = 353
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 66/122 (54%), Gaps = 4/122 (3%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMR- 108
+ +LL H +VGS+IGK G V+ + E+GA I I++ + ERI+ ++ N+ +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISE--GNCPERIITLAGPTNAIFKA 71
Query: 109 HSPAQDAVMR-VHSRIAEIGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASI 167
S D + + S + V RL+V + Q G L+G+GG + E+R +TGA +
Sbjct: 72 FSMIIDKLEEDISSSMTNSTASSKPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQV 131
Query: 168 RV 169
+V
Sbjct: 132 QV 133
Score = 44.7 bits (104), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 34/52 (65%), Gaps = 1/52 (1%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIA-DILPDSEERIVVIS 100
V +L+ + GSLIGKGG ++ + TGA +++A D+LP+S ER + I+
Sbjct: 98 VTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIA 149
Score = 42.0 bits (97), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 42/75 (56%)
Query: 341 SGNHAAILTSTTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATEGVVMV 400
SG A +T+ E+ IP + + G + ++ IRQ+SGA + + +P G+ + V +
Sbjct: 266 SGGIDASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSNDRQVTI 325
Query: 401 SGTSDQMRAAQSLIH 415
+G++ + AQ LI+
Sbjct: 326 TGSTASISLAQYLIN 340
>gi|326378263|gb|ADZ57231.1| neuro-oncological ventral antigen [Branchiostoma floridae]
Length = 511
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 68/132 (51%), Gaps = 8/132 (6%)
Query: 49 EVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIA---DILPDSEERIVVISARENS 105
+++ K+L GS+IGKGG + Q ETGA+IK++ D P + ERIVVI+ E+S
Sbjct: 65 QLLLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSNDFYPGTTERIVVITGSEDS 124
Query: 106 -EMRHSPAQDAVMRV----HSRIAEIGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSEMR 160
+ H + + + +E +A +++V + G ++G+GG + +
Sbjct: 125 LKSVHKFLMEKISQAPQPPAKSPSEQNANNNRAKQVKIVVPNSTAGLIIGKGGATIKFIM 184
Query: 161 RATGASIRVFPK 172
TG+ +++ K
Sbjct: 185 EQTGSRVQISQK 196
>gi|307108077|gb|EFN56318.1| hypothetical protein CHLNCDRAFT_57590 [Chlorella variabilis]
Length = 688
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 49/82 (59%)
Query: 130 PGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAPRCGSPHDEIVQVI 189
P ++V ARLLV S +G L+GRGG + + +GA +R+ PK + P C DE+V+V+
Sbjct: 193 PQRSVEARLLVDSSVVGFLVGRGGATIKDTMARSGAGVRILPKAELPACACLGDEVVRVV 252
Query: 190 GNYHSVQDALFHITSRLRETIF 211
G+ + AL + S+++ +
Sbjct: 253 GSCEAACAALRLLASQIKAHVL 274
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 54/128 (42%), Gaps = 47/128 (36%)
Query: 49 EVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMR 108
EV F+LL ++ G++IGKGG VR + ETGA IK+ D P SEER
Sbjct: 341 EVTFRLLAPTNRTGNIIGKGGEHVRRVRTETGARIKVFDPAPGSEER------------- 387
Query: 109 HSPAQDAVMRVHSRIAEIGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIR 168
+G +LG+ G VS++R+ TGA+I+
Sbjct: 388 ----------------------------------ASVGMVLGKRGATVSQLRQETGAAIK 413
Query: 169 VFPKDQAP 176
V D P
Sbjct: 414 VLNADLVP 421
Score = 38.9 bits (89), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 32/55 (58%)
Query: 52 FKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSE 106
+LLC V +LIGK G V+ + E+GA++ +AD + +ER+V I ++
Sbjct: 33 LRLLCPHALVPALIGKKGENVKRIRRESGATLSVADPVLGCDERVVHIMGERQAQ 87
>gi|72164650|ref|XP_794805.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K-like
[Strongylocentrotus purpuratus]
Length = 341
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 71/136 (52%), Gaps = 21/136 (15%)
Query: 47 EEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSE--ERI--VVISAR 102
+ +V F+LL +K G +IGKGG ++ ++E A++ I PDS +R+ +V ++R
Sbjct: 6 QSQVTFRLLVSSNKAGGVIGKGGQNIKRLRSEYNATVNI----PDSSGPDRVLQIVANSR 61
Query: 103 ENSEMRHSPAQDAVMRVHSRIAEIG--FEPGQA----VVARLLVHSQQIGCLLGRGGHIV 156
EN D + + I E F G+A +LV + Q+G ++GRGG +
Sbjct: 62 EN-------GLDIIKELIPLIREEVSPFSDGEADPYTTTLSVLVQTSQVGAIIGRGGSKI 114
Query: 157 SEMRRATGASIRVFPK 172
E+R++T ++V +
Sbjct: 115 KELRQSTETKVKVLQE 130
Score = 40.4 bits (93), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 31/41 (75%)
Query: 59 DKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVI 99
D VG++IG+GG +R ++ + A I+IA+ LP++E+R++ I
Sbjct: 275 DLVGAVIGRGGERIRNIRSRSQAEIEIANPLPEAEDRVITI 315
Score = 40.0 bits (92), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 36/69 (52%)
Query: 350 STTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATEGVVMVSGTSDQMRA 409
+TT +V IP + V G + +IR S A + + +P P A + V+ + GT +Q+
Sbjct: 265 ATTTQVTIPNDLVGAVIGRGGERIRNIRSRSQAEIEIANPLPEAEDRVITIRGTQEQVSH 324
Query: 410 AQSLIHAFI 418
AQ L+ I
Sbjct: 325 AQFLLQNCI 333
>gi|53749712|ref|NP_001005451.1| poly(rC) binding protein 3 [Xenopus (Silurana) tropicalis]
gi|49250542|gb|AAH74565.1| poly(rC) binding protein 2 [Xenopus (Silurana) tropicalis]
gi|89266917|emb|CAJ82240.1| novel protein similar to poly(rC) binding protein 2 [Xenopus
(Silurana) tropicalis]
Length = 353
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 66/122 (54%), Gaps = 4/122 (3%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMR- 108
+ +LL H +VGS+IGK G V+ + E+GA I I++ + ERI+ ++ N+ +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISE--GNCPERIITLAGPTNAIFKA 71
Query: 109 HSPAQDAVMR-VHSRIAEIGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASI 167
S D + + S + V RL+V + Q G L+G+GG + E+R +TGA +
Sbjct: 72 FSMIIDKLEEDISSSMTNSTASSKPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQV 131
Query: 168 RV 169
+V
Sbjct: 132 QV 133
Score = 44.7 bits (104), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 34/52 (65%), Gaps = 1/52 (1%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIA-DILPDSEERIVVIS 100
V +L+ + GSLIGKGG ++ + TGA +++A D+LP+S ER + I+
Sbjct: 98 VTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIA 149
Score = 42.0 bits (97), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 42/75 (56%)
Query: 341 SGNHAAILTSTTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATEGVVMV 400
SG A +T+ E+ IP + + G + ++ IRQ+SGA + + +P G+ + V +
Sbjct: 266 SGGIDASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSNDRQVTI 325
Query: 401 SGTSDQMRAAQSLIH 415
+G++ + AQ LI+
Sbjct: 326 TGSTASISLAQYLIN 340
>gi|195445981|ref|XP_002070572.1| GK10958 [Drosophila willistoni]
gi|194166657|gb|EDW81558.1| GK10958 [Drosophila willistoni]
Length = 578
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/170 (22%), Positives = 84/170 (49%), Gaps = 20/170 (11%)
Query: 52 FKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIA---DILPDSEERIVVISAREN---- 104
K+L G++IGKGG + + Q +TGA +K++ D P + ER+ +I+
Sbjct: 68 MKILVPAVASGAIIGKGGETIASLQKDTGARVKMSKSHDFYPGTTERVCLITGSTEGIMT 127
Query: 105 ------SEMRHSPAQDAVMRVHSRIAEIGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSE 158
++R P D ++ ++ E + V ++LV + G ++G+GG + +
Sbjct: 128 VLDFIMDKIREKP--DLTTKIIDAESKQTQERDKQV--KILVPNSTAGMIIGKGGAFIKQ 183
Query: 159 MRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRE 208
++ +G+ +++ Q P+ S + + +IG+ + ++A I S++ E
Sbjct: 184 IKEESGSYVQI---SQKPKDVSLQERCITIIGDKENNKNACKMILSKIVE 230
>gi|148226696|ref|NP_001080123.1| poly(rC) binding protein 3 [Xenopus laevis]
gi|27370875|gb|AAH41241.1| Pcbp2b protein [Xenopus laevis]
Length = 353
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 66/122 (54%), Gaps = 4/122 (3%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMR- 108
+ +LL H +VGS+IGK G V+ + E+GA I I++ + ERI+ ++ N+ +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISE--GNCPERIITLAGPTNAIFKA 71
Query: 109 HSPAQDAVMR-VHSRIAEIGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASI 167
S D + + S + V RL+V + Q G L+G+GG + E+R +TGA +
Sbjct: 72 FSMIIDKLEEDISSSMTNSTASSKPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQV 131
Query: 168 RV 169
+V
Sbjct: 132 QV 133
Score = 44.7 bits (104), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 34/52 (65%), Gaps = 1/52 (1%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIA-DILPDSEERIVVIS 100
V +L+ + GSLIGKGG ++ + TGA +++A D+LP+S ER + I+
Sbjct: 98 VTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIA 149
Score = 42.0 bits (97), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 42/75 (56%)
Query: 341 SGNHAAILTSTTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATEGVVMV 400
SG A +T+ E+ IP + + G + ++ IRQ+SGA + + +P G+ + V +
Sbjct: 266 SGGIDASAQATSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSNDRQVTI 325
Query: 401 SGTSDQMRAAQSLIH 415
+G++ + AQ LI+
Sbjct: 326 TGSTASISLAQYLIN 340
>gi|54037961|gb|AAH84195.1| Pcbp2 protein [Xenopus laevis]
Length = 353
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 66/122 (54%), Gaps = 4/122 (3%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMR- 108
+ +LL H +VGS+IGK G V+ + E+GA I I++ + ERI+ ++ N+ +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISE--GNCPERIITLAGPTNAIFKA 71
Query: 109 HSPAQDAVMR-VHSRIAEIGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASI 167
S D + + S + V RL+V + Q G L+G+GG + E+R +TGA +
Sbjct: 72 FSMIIDKLEEDISSSMTNSTASSKPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQV 131
Query: 168 RV 169
+V
Sbjct: 132 QV 133
Score = 44.7 bits (104), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 34/52 (65%), Gaps = 1/52 (1%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIA-DILPDSEERIVVIS 100
V +L+ + GSLIGKGG ++ + TGA +++A D+LP+S ER + I+
Sbjct: 98 VTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIA 149
Score = 42.0 bits (97), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 42/75 (56%)
Query: 341 SGNHAAILTSTTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATEGVVMV 400
SG A +T+ E+ IP + + G + ++ IRQ+SGA + + +P G+ + V +
Sbjct: 266 SGGIDASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSNDRQVTI 325
Query: 401 SGTSDQMRAAQSLIH 415
+G++ + AQ LI+
Sbjct: 326 TGSTASISLAQYLIN 340
>gi|72013105|ref|XP_781909.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K-like
[Strongylocentrotus purpuratus]
Length = 447
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 71/163 (43%), Gaps = 13/163 (7%)
Query: 49 EVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMR 108
+++F+L+ G +IGKGG ++ + + A + I D + ERI+ I R
Sbjct: 34 QIIFRLMIRSINAGGVIGKGGENIKRLRVDYDAKVSIPDC--NGPERIIKIGTRNVDN-- 89
Query: 109 HSPAQDAVMRVHSRIAEIGFEPGQA--VVARLLVHSQQIGCLLGRGGHIVSEMRRATGAS 166
A D + + + E Q R++VH G ++GR G + E+R TGA
Sbjct: 90 ---AIDCIKDIIPSVGEKKHSQDQQNNSFIRIMVHQSHAGAIIGRAGFKIKELREKTGAH 146
Query: 167 IRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRET 209
+V+ + C D +VQ+ G+ + A + ET
Sbjct: 147 FKVYTE----TCPKSTDRVVQLTGSPDVIAKAAREVYEICTET 185
Score = 38.9 bits (89), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 30/45 (66%)
Query: 59 DKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARE 103
D GS+IG+GG ++ + ++GA IKI D L +++RI+ I+ +
Sbjct: 378 DLAGSIIGRGGQRIKRIRMQSGAQIKIDDPLSGAKDRIITITGTQ 422
Score = 38.5 bits (88), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 17/62 (27%), Positives = 31/62 (50%)
Query: 354 EVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATEGVVMVSGTSDQMRAAQSL 413
+V IP + G + IR SGA + ++DP GA + ++ ++GT + A+ L
Sbjct: 372 QVTIPNDLAGSIIGRGGQRIKRIRMQSGAQIKIDDPLSGAKDRIITITGTQHDIAHAKFL 431
Query: 414 IH 415
+
Sbjct: 432 LQ 433
>gi|189528952|ref|XP_001923490.1| PREDICTED: RNA-binding protein Nova-1 isoform 1 [Danio rerio]
Length = 496
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 80/192 (41%), Gaps = 37/192 (19%)
Query: 41 RNRMFYEEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIA---DILPDSEERIV 97
R E E K+L GS+IGKGG + Q ETGA+IK++ D P + ER+
Sbjct: 48 RTNTGEEGEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVC 107
Query: 98 VISARENSEMRHSPAQDAVMRVHSRIAE---------------------IGFEPGQAVVA 136
+I +A+ VH IAE P + A
Sbjct: 108 LIQG----------TVEALNNVHDFIAEKVREMPQSAQKTEPVSILQPQTTVNPDRVKQA 157
Query: 137 RLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQ 196
+L+V + G ++G+GG V + +GA +++ Q P + + +V + G +
Sbjct: 158 KLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQL---SQKPDGINLQERVVTISGEPEQNR 214
Query: 197 DALFHITSRLRE 208
A+ I +++E
Sbjct: 215 KAVEIIVQKIQE 226
>gi|426340771|ref|XP_004034301.1| PREDICTED: poly(rC)-binding protein 4 isoform 1 [Gorilla gorilla
gorilla]
gi|426340773|ref|XP_004034302.1| PREDICTED: poly(rC)-binding protein 4 isoform 2 [Gorilla gorilla
gorilla]
gi|426340775|ref|XP_004034303.1| PREDICTED: poly(rC)-binding protein 4 isoform 3 [Gorilla gorilla
gorilla]
Length = 403
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 62/247 (25%), Positives = 106/247 (42%), Gaps = 67/247 (27%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIA-DILPDSEERIV---------VI 99
V +L+ + GSLIGK G+ ++ + TGA +++A D+LP+S ER V ++
Sbjct: 102 VTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQVAGDLLPNSTERAVTVSGVPDAIIL 161
Query: 100 SARE-NSEMRHSPAQDAVMRVH------------------------------SRIAEI-- 126
R+ + + SP + A + H +++ ++
Sbjct: 162 CVRQICAVILESPPKGATIPYHPSLSLGTVLLSANQGFSVQGQYGAVTPTEVTKLQQLSS 221
Query: 127 ------------GFEPG-QAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKD 173
G +PG Q LV + IGC++GR G +SE+R+ +GA I++ +
Sbjct: 222 HAVPFATPSVVPGLDPGTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKI--GN 279
Query: 174 QAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKRPGPNNGHSYL-----PPF 228
QA G H V + G+ S+ A + IT+ L ET P++ + L PP
Sbjct: 280 QAEGAGERH---VTITGSPVSIALAQYLITACL-ETAKSTSGGTPSSAPADLPAPFSPPL 335
Query: 229 PEMPPPP 235
+P P
Sbjct: 336 TALPTAP 342
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 62/124 (50%), Gaps = 8/124 (6%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMRH 109
+ ++L H +VGS+IGK G V+ + ++ A I I++ ERI I+ + + H
Sbjct: 18 LTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISE--GSCPERITTITG-STAAVFH 74
Query: 110 SPAQDAVMRVHSRIAEIGFEPGQA----VVARLLVHSQQIGCLLGRGGHIVSEMRRATGA 165
+ + A ++ + G V RL++ + Q G L+G+ G + E+R TGA
Sbjct: 75 AVSMIA-FKLDEDLCAAPANGGNVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRETTGA 133
Query: 166 SIRV 169
++V
Sbjct: 134 QVQV 137
Score = 40.8 bits (94), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 36/65 (55%)
Query: 354 EVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATEGVVMVSGTSDQMRAAQSL 413
E ++P + V G S +S IRQ+SGA++ + + GA E V ++G+ + AQ L
Sbjct: 245 EFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQAEGAGERHVTITGSPVSIALAQYL 304
Query: 414 IHAFI 418
I A +
Sbjct: 305 ITACL 309
>gi|385305943|gb|EIF49885.1| kh domain rna binding protein [Dekkera bruxellensis AWRI1499]
Length = 541
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 94/416 (22%), Positives = 162/416 (38%), Gaps = 105/416 (25%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMRH 109
V F++LC + + +++GKGG ++ + + A I ++D L ER++ +
Sbjct: 156 VHFRMLCTISEAATVVGKGGETIKKIKELSNARINVSDNLKGVPERVISV---------R 206
Query: 110 SPAQDAVMRVHSRIAEIGF-EP--------GQAVVARLLVHSQQIGCLLGRGGHIVSEMR 160
PA+ V + I + EP Q RLL +G ++G+ G E+
Sbjct: 207 GPAE-YVAKAFGLIVRMQLGEPLNVPSSLESQQYNLRLLFPHTIMGYIIGKKGSRFREIE 265
Query: 161 RATGASIRVFPKDQAPRCGSPHDEIV----QVIGNYHSVQDALFHITSRLRETIFPMKRP 216
++ A+++ +D+I+ + N + V DA+ T + +T+ K+
Sbjct: 266 ESSAAALKA------------NDQILPASTDRVLNINGVADAIHIATYYIAQTVIEHKQ- 312
Query: 217 GPNNGHSYLPPFPEMPPPPFRPRHNPASPGSYPSPVGPFHSMDRGMGPSQPFDHQAA--F 274
+M + +NPA+ P+ P + +A F
Sbjct: 313 -------------QMSKAIY---YNPANFAQ----------------PTIPLVNSSARRF 340
Query: 275 SHGMDPMVPPNSDRIPFPYGSERPGHGPTFDRPPSPR----SWTPQG-VGGGDPRGFDAS 329
H M M R+ +G + PG GP P +PQG G P D
Sbjct: 341 QHRM--MGDFRGGRMGRQFGPQ-PGFGPMMGMPSQMMGMYGQMSPQGNANGQSPESGDGQ 397
Query: 330 S--GFTPRNRPVESG-----------NHAAILTSTTIEVV-------------IPQLYMA 363
S G P +P + G N AA+ ++T E V +PQ ++
Sbjct: 398 SNMGRIPGGKPPQMGGYFPPQYAPQFNPAAVASNTRAETVTTGADGKLNQDIFVPQKHIG 457
Query: 364 HVYGENNSNLSHIRQISGANVVVNDPKPGATE-GVVMVSGTSDQMRAAQSLIHAFI 418
+ G NL IRQ +G V +ND PG+TE + ++S ++ A LI+ I
Sbjct: 458 LIIGRGGRNLKDIRQQTGCYVKINDEVPGSTERKLTLMSNNMYGIQNALLLINNKI 513
>gi|338723967|ref|XP_001497902.3| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 3-like
[Equus caballus]
Length = 638
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 83/154 (53%), Gaps = 15/154 (9%)
Query: 61 VGSLIGKGGSIVRTFQNETGASIKIADI-LPDSEERIVVISARENSEMRHSPAQDAVMRV 119
VG++IGK G ++ GASIKIA PD++ R+V+I+ ++ + A R+
Sbjct: 476 VGAIIGKQGQHIKQLSRFAGASIKIAPAEAPDAKVRMVIITGPPEAQFK------AQGRI 529
Query: 120 HSRIAEIGF-EPGQAVV--ARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAP 176
+ +I E F P + V A + V S G ++G+GG V+E++ + A + V P+DQ P
Sbjct: 530 YGKIKEENFVSPKEEVKLEAHIRVPSFAAGRVIGKGGKTVNELQNLSSAEV-VVPRDQTP 588
Query: 177 RCGSPHDE-IVQVIGNYHSVQDALFHITSRLRET 209
+D+ +V++ G++++ Q A I L +
Sbjct: 589 ---DENDQVVVKITGHFYACQVAQRKIQEILTQV 619
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 89/196 (45%), Gaps = 21/196 (10%)
Query: 52 FKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKI--ADILPDSEERIVVISARENSEMRH 109
+LL VG++IGK G+ +R +T + I + + +E+ I ++S E +
Sbjct: 256 LRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKSITILSTPEGT---- 311
Query: 110 SPAQDAVMRV-HSRIAEIGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIR 168
S A +++ + H +I F + + ++L H+ +G L+G+ G + ++ + T I
Sbjct: 312 SAACKSILEIMHKEAQDIKF--TEEIPLKILAHNNFVGRLIGKEGRNLKKIEQDTDTKIT 369
Query: 169 VFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRET----IFPMKR-----PGPN 219
+ P Q +P + + + GN + A I ++RE+ I M PG N
Sbjct: 370 ISPL-QELTLYNP-ERTITIKGNVETCAKAEEEIMKKIRESYENDIASMNLQAHLIPGLN 427
Query: 220 -NGHSYLPPFPEMPPP 234
N PP MPPP
Sbjct: 428 LNALGLFPPTSGMPPP 443
>gi|170036665|ref|XP_001846183.1| igf2 mRNA binding protein [Culex quinquefasciatus]
gi|167879496|gb|EDS42879.1| igf2 mRNA binding protein [Culex quinquefasciatus]
Length = 520
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 84/167 (50%), Gaps = 21/167 (12%)
Query: 59 DKVGSLIGKGGSIVRTFQNETGASIKIADI-----LPDSEERIVVISARENSEMRHSPAQ 113
+ VG++IG GS +R +GAS+KIA + L ER V I ++ +
Sbjct: 353 NAVGAIIGTKGSHIRNIIRFSGASVKIAPLEADKPLEQQTERKVTIVGTPEAQWK----- 407
Query: 114 DAVMRVHSRIAEIGFEPGQA---VVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVF 170
A + ++ E GF G + +LV S Q+G ++G+GG V E++R TG+ I+
Sbjct: 408 -AQYLIFEKMREEGFVSGTDDVRLTVEILVPSAQVGRIIGKGGQNVRELQRVTGSIIK-L 465
Query: 171 PKDQAPRCGSPHDE--IVQVIGNYHSVQDALFHIT-SRLRETIFPMK 214
P+ A +P DE V +IG + SVQ ++ + +L + I P +
Sbjct: 466 PEHTA---ATPVDEETTVHIIGPFFSVQVSVENCKFEKLIKCILPQE 509
Score = 38.1 bits (87), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 34/160 (21%), Positives = 73/160 (45%), Gaps = 10/160 (6%)
Query: 52 FKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKI--ADILPDSEERIVVISARENSEMRH 109
+LL + VG++IG+ GS +R + A + + D + E+ I + EN
Sbjct: 128 LRLLVASEMVGAIIGRQGSTIRQITQNSRARVDVHRKDNVGSLEKAITIYGNPENC---- 183
Query: 110 SPAQDAVMRVHSRIAEIGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRV 169
+ A ++ V + A G+ + ++L H+ IG ++G+ G+ + + + T I V
Sbjct: 184 TSACKRILEVMQQEAN-NTNKGE-ICLKILAHNNLIGRIIGKSGNTIKRIMQDTDTKITV 241
Query: 170 FPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRET 209
+ + I+ V G+ ++ I+++LR++
Sbjct: 242 SSINDINSFN--LERIITVKGSIDNMSRGESQISAKLRQS 279
>gi|51092069|gb|AAT94448.1| RE39088p [Drosophila melanogaster]
Length = 563
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 83/170 (48%), Gaps = 20/170 (11%)
Query: 52 FKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIA---DILPDSEERIVVISARENSEM- 107
K+L G++IGKGG + + Q +TGA +K++ D P + ER+ +I+ + M
Sbjct: 123 MKILVPAVASGAIIGKGGETIASLQKDTGARVKMSKSHDFYPGTTERVCLITGSTEAIMV 182
Query: 108 ---------RHSPAQDAVMRVHSRIAEIGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSE 158
R P D ++ ++ E + V ++LV + G ++G+GG + +
Sbjct: 183 VMEFIMDKIREKP--DLTNKIVDTDSKQTQERDKQV--KILVPNSTAGMIIGKGGAFIKQ 238
Query: 159 MRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRE 208
++ +G+ +++ Q P S + + +IG+ + ++A I S++ E
Sbjct: 239 IKEESGSYVQI---SQKPTDVSLQERCITIIGDKENNKNACKMILSKIVE 285
>gi|302792551|ref|XP_002978041.1| hypothetical protein SELMODRAFT_108378 [Selaginella moellendorffii]
gi|300154062|gb|EFJ20698.1| hypothetical protein SELMODRAFT_108378 [Selaginella moellendorffii]
Length = 324
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 80/165 (48%), Gaps = 10/165 (6%)
Query: 47 EEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIA---DILPDSEERIVVISARE 103
E + L GS+IGKGGS + FQ ++GA I+++ + P + +R+ V+S
Sbjct: 12 ETTTNLRFLVTNTAAGSVIGKGGSTISDFQAQSGARIQLSRNHEYFPGTSDRVAVLSGSL 71
Query: 104 NSEMRHSPAQDAVMRVHSRIAEIGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRAT 163
+ + Q + ++ I + + +++ +LLV G ++G+GG + + +
Sbjct: 72 ADVL--TAFQLIISKI---IKDDNQDDTKSIQVKLLVPKTVCGAIIGKGGSNIKKFVEDS 126
Query: 164 GASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRE 208
ASI++ +DQ D IV + GN + A+ I ++L E
Sbjct: 127 QASIKLSSQDQL--LPGVIDRIVTIGGNVDQIIKAVTLILTKLTE 169
>gi|2105469|gb|AAC35208.1| putative RNA binding protein KOC [Homo sapiens]
gi|4098297|gb|AAD09223.1| Koc1 [Homo sapiens]
Length = 579
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 89/168 (52%), Gaps = 16/168 (9%)
Query: 47 EEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADI-LPDSEERIVVISARENS 105
E E V + + L VG++IGK G ++ GASIKIA PD++ R+V+I+ +
Sbjct: 404 ETETVHQFIPALS-VGAIIGKQGQHIKQLSRFAGASIKIAPAEAPDAKVRMVIITGPPEA 462
Query: 106 EMRHSPAQDAVMRVHSRIAEIGF-EPGQAVV--ARLLVHSQQIGCLLGRGGHIVSEMRRA 162
+ + A R++ +I E F P + V A + V S G ++G+GG V+E++
Sbjct: 463 QFK------AQGRIYGKIKEENFVSPKEEVKLEAHIRVPSFAAGRVIGKGGKTVNELQNL 516
Query: 163 TGASIRVFPKDQAPRCGSPHDE-IVQVIGNYHSVQDALFHITSRLRET 209
+ A + V P+DQ P +D+ +V++ G++++ Q A I L +
Sbjct: 517 SSAEV-VVPRDQTP---DENDQVVVKITGHFYACQVAQRKIQEILTQV 560
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 89/196 (45%), Gaps = 21/196 (10%)
Query: 52 FKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKI--ADILPDSEERIVVISARENSEMRH 109
+LL VG++IGK G+ +R +T + I + + +E+ I ++S E +
Sbjct: 198 LRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKSITILSTPEGT---- 253
Query: 110 SPAQDAVMRV-HSRIAEIGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIR 168
S A +++ + H +I F + + ++L H+ +G L+G+ G + ++ + T I
Sbjct: 254 SAACKSILEIMHKEAQDIKF--TEEIPLKILAHNNFVGRLIGKEGRNLKKIEQDTDTKIT 311
Query: 169 VFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRET----IFPMKR-----PGPN 219
+ P Q +P + + V GN + A I ++RE+ I M PG N
Sbjct: 312 ISPL-QELTLYNP-ERTITVKGNVETCAKAEEEIMKKIRESYENDIASMNLQAHLIPGLN 369
Query: 220 -NGHSYLPPFPEMPPP 234
N PP MPPP
Sbjct: 370 LNALGLFPPTSGMPPP 385
>gi|348524725|ref|XP_003449873.1| PREDICTED: RNA-binding protein Nova-1-like [Oreochromis niloticus]
Length = 503
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 82/187 (43%), Gaps = 27/187 (14%)
Query: 41 RNRMFYEEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIA---DILPDSEERIV 97
R E E K+L GS+IGKGG + Q ETGA+IK++ D P + ER+
Sbjct: 56 RTNTGEEGEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVC 115
Query: 98 VI----------------SARENSEMRHSPAQDAVMRVHSRIAEIGFEPGQAVVARLLVH 141
+I RE + P ++++ + + P + A+L+V
Sbjct: 116 LIQGTVEALNGVHNFIAEKVREMPQSAQKPEPVSILQPQTTV-----NPDRVKQAKLIVP 170
Query: 142 SQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFH 201
+ G ++G+GG V + +GA +++ Q P + + +V + G + A+
Sbjct: 171 NSTAGLIIGKGGATVKAVMEQSGAWVQL---SQKPEGINLQERVVTISGEPEQNRKAVEI 227
Query: 202 ITSRLRE 208
I +++E
Sbjct: 228 IVQKIQE 234
>gi|156368623|ref|XP_001627792.1| predicted protein [Nematostella vectensis]
gi|156214712|gb|EDO35692.1| predicted protein [Nematostella vectensis]
Length = 390
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 78/165 (47%), Gaps = 10/165 (6%)
Query: 51 VFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIA---DILPDSEERI-VVISARENSE 106
+ K+L GS+IGKGG + Q TGA IK++ P ++ERI +++ EN
Sbjct: 47 ILKILVPNYAAGSIIGKGGQNIAQVQQTTGARIKLSPNNQYYPGTQERIGLIMGEVENIV 106
Query: 107 MRHSPAQDAVMRVHSRIA---EIGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRAT 163
D + + I I F+ +A +++V + G ++G+ G + + T
Sbjct: 107 QMLDFVIDKIRQEPQGIKASMSISFDRERAKQMKIIVPNSTAGMIIGKAGSAIKSISEQT 166
Query: 164 GASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRE 208
GA I++ KD G + IV V G+ V A ITS+++E
Sbjct: 167 GARIQISQKDAESVAG---ERIVCVGGSQEQVTAACVIITSKVQE 208
>gi|40792684|gb|AAR90343.1| circadian RNA-binding protein CHLAMY 1 subunit C1 [Chlamydomonas
reinhardtii]
Length = 488
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 77/173 (44%), Gaps = 31/173 (17%)
Query: 49 EVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMR 108
E L C VG +IG+GG +RT Q +GA I + P+ R + IS
Sbjct: 177 EAQKTLECPQGIVGRVIGRGGETIRTLQQASGAHILVNQDFPEGAARQITISG------- 229
Query: 109 HSPAQDAVMRVHSRIAE-IGFEPGQA--VVARLLVHSQQ--------IGCLLGRGGHIVS 157
+QDAV R S + E IG E VV R V S + +G ++G+GG +
Sbjct: 230 ---SQDAVDRAASMVQELIGGEHANTSQVVQRFGVGSTEVLECPKTMVGRIIGKGGETIK 286
Query: 158 EMRRATGASIRVFPKDQAPR-CGSPHDEIVQVIGNYHSVQDALFHITSRLRET 209
++++ ASI++ DQ+ C V + G H++ A I +R T
Sbjct: 287 DLQKRFNASIQI---DQSAMPCK------VTITGPSHTIASARRAIEDLIRST 330
Score = 46.2 bits (108), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 78/161 (48%), Gaps = 22/161 (13%)
Query: 54 LLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMRHSPAQ 113
++C DKVG +IG+ G+ +R + TG I++ P ++ V IS R + R
Sbjct: 103 IMCPPDKVGRVIGRAGATIRDLEASTGTRIQVDHKAPG--DKPVTISGRADEVERAKRQV 160
Query: 114 DAVMRVHSRIAEIGFEPGQAVVARLLVHSQQI-GCLLGRGGHIVSEMRRATGASIRV--- 169
++ H ++ PG+A + L Q I G ++GRGG + +++A+GA I V
Sbjct: 161 LDLISGHG--SDAAPAPGEA--QKTLECPQGIVGRVIGRGGETIRTLQQASGAHILVNQD 216
Query: 170 FPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETI 210
FP+ A + + + G+ QDA+ S ++E I
Sbjct: 217 FPEGAARQ--------ITISGS----QDAVDRAASMVQELI 245
>gi|161078122|ref|NP_001036695.1| pasilla, isoform K [Drosophila melanogaster]
gi|320542560|ref|NP_001189201.1| pasilla, isoform P [Drosophila melanogaster]
gi|320542562|ref|NP_001189202.1| pasilla, isoform M [Drosophila melanogaster]
gi|113194763|gb|ABI31152.1| pasilla, isoform K [Drosophila melanogaster]
gi|318068745|gb|ADV37292.1| pasilla, isoform P [Drosophila melanogaster]
gi|318068746|gb|ADV37293.1| pasilla, isoform M [Drosophila melanogaster]
Length = 550
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 83/170 (48%), Gaps = 20/170 (11%)
Query: 52 FKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIA---DILPDSEERIVVISARENSEM- 107
K+L G++IGKGG + + Q +TGA +K++ D P + ER+ +I+ + M
Sbjct: 46 MKILVPAVASGAIIGKGGETIASLQKDTGARVKMSKSHDFYPGTTERVCLITGSTEAIMV 105
Query: 108 ---------RHSPAQDAVMRVHSRIAEIGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSE 158
R P D ++ ++ E + V ++LV + G ++G+GG + +
Sbjct: 106 VMEFIMDKIREKP--DLTNKIVDTDSKQTQERDKQV--KILVPNSTAGMIIGKGGAFIKQ 161
Query: 159 MRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRE 208
++ +G+ +++ Q P S + + +IG+ + ++A I S++ E
Sbjct: 162 IKEESGSYVQI---SQKPTDVSLQERCITIIGDKENNKNACKMILSKIVE 208
>gi|52545962|emb|CAH56186.1| hypothetical protein [Homo sapiens]
Length = 198
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 88/170 (51%), Gaps = 20/170 (11%)
Query: 47 EEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADI-LPDSEERIVVISARENS 105
E E V + L VG++IGK G ++ GASIKIA PD++ R+V+I+ +
Sbjct: 23 ETETVHLFIPALS-VGAIIGKQGQHIKQLSRFAGASIKIAPAEAPDAKVRMVIITGPPEA 81
Query: 106 EMRHSPAQDAVMRVHSRIAEIGF-EPGQAVVARLLVH----SQQIGCLLGRGGHIVSEMR 160
+ + A R++ +I E F P + V +L H S G ++G+GG V+E++
Sbjct: 82 QFK------AQGRIYGKIKEENFVSPKEEV--KLEAHIRAPSFAAGRVIGKGGKTVNELQ 133
Query: 161 RATGASIRVFPKDQAPRCGSPHDE-IVQVIGNYHSVQDALFHITSRLRET 209
+ A + V P+DQ P +D+ +V++ G++++ Q A I L +
Sbjct: 134 NLSSAEV-VVPRDQTP---DENDQVVVKITGHFYACQVAQRKIQEILTQV 179
>gi|195430448|ref|XP_002063267.1| GK21481 [Drosophila willistoni]
gi|194159352|gb|EDW74253.1| GK21481 [Drosophila willistoni]
Length = 505
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 81/174 (46%), Gaps = 20/174 (11%)
Query: 41 RNRMFYEEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVIS 100
RNR EE V ++L G++IGKGG ++ + + A++ + D ER + IS
Sbjct: 16 RNR--RNEETV-RILIPSSIAGAVIGKGGQHIQKMRTQYKATVSVDD--SQGPERTIQIS 70
Query: 101 ARENSEMRHSPAQDAVMRVHSRIAEIGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSEMR 160
A ++ + + + + + E + RLL+H GC++G+GG + E+R
Sbjct: 71 A----------DIESTLEIITEMLKYFEERDEDFDVRLLIHQSLAGCVIGKGGQKIKEIR 120
Query: 161 RATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMK 214
G + AP+ D +VQ +G V +A+ + + R+T P+K
Sbjct: 121 DRIGCRFLKVFSNVAPQS---TDRVVQTVGKQSQVIEAVREVITLTRDT--PIK 169
>gi|67971394|dbj|BAE02039.1| unnamed protein product [Macaca fascicularis]
Length = 316
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 83/154 (53%), Gaps = 15/154 (9%)
Query: 61 VGSLIGKGGSIVRTFQNETGASIKIADI-LPDSEERIVVISARENSEMRHSPAQDAVMRV 119
VG++IGK G ++ GASIKIA PD++ R+V+I+ ++ + A R+
Sbjct: 154 VGAIIGKQGQHIKQLSRFAGASIKIAPAEAPDAKVRMVIITGPPEAQFK------AQGRI 207
Query: 120 HSRIAEIGF-EPGQAVV--ARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAP 176
+ +I E F P + V A + V S G ++G+GG V+E++ + A + V P+DQ P
Sbjct: 208 YGKIKEENFVSPKEEVKLEAHIRVPSFAAGRVIGKGGKTVNELQNLSSAEV-VVPRDQTP 266
Query: 177 RCGSPHDE-IVQVIGNYHSVQDALFHITSRLRET 209
+D+ +V++ G++++ Q A I L +
Sbjct: 267 ---DENDQVVVKITGHFYACQVAQRKIQEILTQV 297
>gi|195572282|ref|XP_002104125.1| GD18616 [Drosophila simulans]
gi|194200052|gb|EDX13628.1| GD18616 [Drosophila simulans]
Length = 330
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 83/161 (51%), Gaps = 22/161 (13%)
Query: 62 GSLIGKGGSIVRTFQNETGASIKIA---DILPDSEERIVVISARENSEM----------R 108
G++IGKGG + + Q +TGA +K++ D P + ER+ +I+ + M R
Sbjct: 93 GAIIGKGGETIASLQKDTGARVKMSKSHDFYPGTTERVCLITGSTEAIMVVMEFIMDKIR 152
Query: 109 HSP-AQDAVMRVHSRIAEIGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASI 167
P + ++ V S+ + E + V ++LV + G ++G+GG + +++ +G+ +
Sbjct: 153 EKPDLTNKIVDVESKQTQ---ERDKQV--KILVPNSTAGMIIGKGGAFIKQIKEESGSYV 207
Query: 168 RVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRE 208
++ Q P+ S + + +IG+ + ++A I S++ E
Sbjct: 208 QI---SQKPKDVSLQERCITIIGDKENNKNACKMILSKIVE 245
>gi|161078112|ref|NP_001036692.1| pasilla, isoform F [Drosophila melanogaster]
gi|164449760|ref|NP_731351.3| pasilla, isoform H [Drosophila melanogaster]
gi|164449762|ref|NP_731352.3| pasilla, isoform G [Drosophila melanogaster]
gi|320542556|ref|NP_001189199.1| pasilla, isoform N [Drosophila melanogaster]
gi|320542564|ref|NP_001189203.1| pasilla, isoform O [Drosophila melanogaster]
gi|11526806|gb|AAG36789.1|AF220422_1 PASILLA splice variant 3 [Drosophila melanogaster]
gi|158030195|gb|AAF54377.3| pasilla, isoform F [Drosophila melanogaster]
gi|158030196|gb|AAN13425.2| pasilla, isoform G [Drosophila melanogaster]
gi|158030197|gb|AAN13424.2| pasilla, isoform H [Drosophila melanogaster]
gi|318068743|gb|ADV37290.1| pasilla, isoform N [Drosophila melanogaster]
gi|318068747|gb|ADV37294.1| pasilla, isoform O [Drosophila melanogaster]
Length = 572
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 83/170 (48%), Gaps = 20/170 (11%)
Query: 52 FKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIA---DILPDSEERIVVISARENSEM- 107
K+L G++IGKGG + + Q +TGA +K++ D P + ER+ +I+ + M
Sbjct: 68 MKILVPAVASGAIIGKGGETIASLQKDTGARVKMSKSHDFYPGTTERVCLITGSTEAIMV 127
Query: 108 ---------RHSPAQDAVMRVHSRIAEIGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSE 158
R P D ++ ++ E + V ++LV + G ++G+GG + +
Sbjct: 128 VMEFIMDKIREKP--DLTNKIVDTDSKQTQERDKQV--KILVPNSTAGMIIGKGGAFIKQ 183
Query: 159 MRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRE 208
++ +G+ +++ Q P S + + +IG+ + ++A I S++ E
Sbjct: 184 IKEESGSYVQI---SQKPTDVSLQERCITIIGDKENNKNACKMILSKIVE 230
>gi|24645366|ref|NP_731354.1| pasilla, isoform B [Drosophila melanogaster]
gi|11526802|gb|AAG36787.1|AF220420_1 PASILLA splice variant 1 [Drosophila melanogaster]
gi|11526804|gb|AAG36788.1|AF220421_1 PASILLA splice variant 2 [Drosophila melanogaster]
gi|23170798|gb|AAN13427.1| pasilla, isoform B [Drosophila melanogaster]
Length = 475
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 83/170 (48%), Gaps = 20/170 (11%)
Query: 52 FKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIA---DILPDSEERIVVISARENSEM- 107
K+L G++IGKGG + + Q +TGA +K++ D P + ER+ +I+ + M
Sbjct: 35 MKILVPAVASGAIIGKGGETIASLQKDTGARVKMSKSHDFYPGTTERVCLITGSTEAIMV 94
Query: 108 ---------RHSPAQDAVMRVHSRIAEIGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSE 158
R P D ++ ++ E + V ++LV + G ++G+GG + +
Sbjct: 95 VMEFIMDKIREKP--DLTNKIVDTDSKQTQERDKQV--KILVPNSTAGMIIGKGGAFIKQ 150
Query: 159 MRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRE 208
++ +G+ +++ Q P S + + +IG+ + ++A I S++ E
Sbjct: 151 IKEESGSYVQI---SQKPTDVSLQERCITIIGDKENNKNACKMILSKIVE 197
>gi|428183593|gb|EKX52450.1| hypothetical protein GUITHDRAFT_101621 [Guillardia theta CCMP2712]
Length = 358
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/165 (22%), Positives = 80/165 (48%), Gaps = 4/165 (2%)
Query: 47 EEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKI---ADILPDSEERIVVISARE 103
E ++ K+L GS+IGK G+ + + ++ +GA +K+ ++ P + +RIV+IS +
Sbjct: 33 ETQMALKILIGNKSAGSVIGKAGATINSIKDTSGAKVKVSSNSETFPGTADRIVLISGKV 92
Query: 104 NSEMRHSPAQDAVMRVHSRIAEIGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRAT 163
+ + + + M + + + +++ + G ++G+GG ++ +R T
Sbjct: 93 ETVLSAAKMVISEMYRDPNSGRVPDDVNAVMTVSIVIPAAACGLVIGKGGEKINSLREET 152
Query: 164 GASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRE 208
A I++ KD+ G ++ IV + G Q A+ I + E
Sbjct: 153 QAKIQLQAKDKVAIPG-LNERIVTIQGTLPQAQTAVEKIVHLIHE 196
>gi|24645368|ref|NP_731355.1| pasilla, isoform D [Drosophila melanogaster]
gi|23170799|gb|AAN13428.1| pasilla, isoform D [Drosophila melanogaster]
Length = 583
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 83/170 (48%), Gaps = 20/170 (11%)
Query: 52 FKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIA---DILPDSEERIVVISARENSEM- 107
K+L G++IGKGG + + Q +TGA +K++ D P + ER+ +I+ + M
Sbjct: 79 MKILVPAVASGAIIGKGGETIASLQKDTGARVKMSKSHDFYPGTTERVCLITGSTEAIMV 138
Query: 108 ---------RHSPAQDAVMRVHSRIAEIGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSE 158
R P D ++ ++ E + V ++LV + G ++G+GG + +
Sbjct: 139 VMEFIMDKIREKP--DLTNKIVDTDSKQTQERDKQV--KILVPNSTAGMIIGKGGAFIKQ 194
Query: 159 MRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRE 208
++ +G+ +++ Q P S + + +IG+ + ++A I S++ E
Sbjct: 195 IKEESGSYVQI---SQKPTDVSLQERCITIIGDKENNKNACKMILSKIVE 241
>gi|302766557|ref|XP_002966699.1| hypothetical protein SELMODRAFT_85231 [Selaginella moellendorffii]
gi|300166119|gb|EFJ32726.1| hypothetical protein SELMODRAFT_85231 [Selaginella moellendorffii]
Length = 324
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 80/165 (48%), Gaps = 10/165 (6%)
Query: 47 EEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIA---DILPDSEERIVVISARE 103
E + L GS+IGKGGS + FQ ++GA I+++ + P + +R+ V+S
Sbjct: 12 ETTTNLRFLVTNTAAGSVIGKGGSTISDFQAQSGARIQLSRNHEYFPGTSDRVAVLSGSL 71
Query: 104 NSEMRHSPAQDAVMRVHSRIAEIGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRAT 163
+ + Q + ++ I + + +++ +LLV G ++G+GG + + +
Sbjct: 72 ADVL--TAFQLIISKI---IKDDNQDDTKSIQVKLLVPKTVCGAIIGKGGSNIKKFVEDS 126
Query: 164 GASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRE 208
ASI++ +DQ D IV + GN + A+ I ++L E
Sbjct: 127 QASIKLSSQDQL--LPGVIDRIVTIGGNVDQIIKAVTLILTKLTE 169
>gi|410910370|ref|XP_003968663.1| PREDICTED: RNA-binding protein Nova-1-like [Takifugu rubripes]
Length = 496
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 81/192 (42%), Gaps = 37/192 (19%)
Query: 41 RNRMFYEEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIA---DILPDSEERIV 97
R E E K+L GS+IGKGG + Q ETGA+IK++ D P + ER+
Sbjct: 48 RTNTGEEGEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVC 107
Query: 98 VISARENSEMRHSPAQDAVMRVHSRIAE---------------------IGFEPGQAVVA 136
+I +A+ VH+ IAE P + A
Sbjct: 108 LIQG----------TVEALNGVHNFIAEKVREMPQSTQKTEPVSILQPQTTVNPDRVKQA 157
Query: 137 RLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQ 196
+L+V + G ++G+GG V + +GA +++ Q P + + +V + G +
Sbjct: 158 KLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQL---SQKPEGINLQERVVTISGEPEQNR 214
Query: 197 DALFHITSRLRE 208
A+ I +++E
Sbjct: 215 KAVEIIVQKIQE 226
>gi|410952458|ref|XP_003982897.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 3
isoform 3 [Felis catus]
Length = 441
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 83/154 (53%), Gaps = 15/154 (9%)
Query: 61 VGSLIGKGGSIVRTFQNETGASIKIADI-LPDSEERIVVISARENSEMRHSPAQDAVMRV 119
VG++IGK G ++ GASIKIA PD++ R+V+I+ ++ + A R+
Sbjct: 279 VGAIIGKQGQHIKQLSRFAGASIKIAPAEAPDAKVRMVIITGPPEAQFK------AQGRI 332
Query: 120 HSRIAEIGF-EPGQAVV--ARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAP 176
+ +I E F P + V A + V S G ++G+GG V+E++ + A + V P+DQ P
Sbjct: 333 YGKIKEENFVSPKEEVKLEAHIRVPSFAAGRVIGKGGKTVNELQNLSSAEV-VVPRDQTP 391
Query: 177 RCGSPHDE-IVQVIGNYHSVQDALFHITSRLRET 209
+D+ +V++ G++++ Q A I L +
Sbjct: 392 ---DENDQVVVKITGHFYACQVAQRKIQEILTQV 422
>gi|345780248|ref|XP_003431966.1| PREDICTED: insulin-like growth factor 2 mRNA binding protein 3
[Canis lupus familiaris]
Length = 441
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 83/154 (53%), Gaps = 15/154 (9%)
Query: 61 VGSLIGKGGSIVRTFQNETGASIKIADI-LPDSEERIVVISARENSEMRHSPAQDAVMRV 119
VG++IGK G ++ GASIKIA PD++ R+V+I+ ++ + A R+
Sbjct: 279 VGAIIGKQGQHIKQLSRFAGASIKIAPAEAPDAKVRMVIITGPPEAQFK------AQGRI 332
Query: 120 HSRIAEIGF-EPGQAVV--ARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAP 176
+ +I E F P + V A + V S G ++G+GG V+E++ + A + V P+DQ P
Sbjct: 333 YGKIKEENFVSPKEEVKLEAHIRVPSFAAGRVIGKGGKTVNELQNLSSAEV-VVPRDQTP 391
Query: 177 RCGSPHDE-IVQVIGNYHSVQDALFHITSRLRET 209
+D+ +V++ G++++ Q A I L +
Sbjct: 392 ---DENDQVVVKITGHFYACQVAQRKIQEILTQV 422
>gi|119614192|gb|EAW93786.1| insulin-like growth factor 2 mRNA binding protein 3, isoform CRA_a
[Homo sapiens]
Length = 422
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 83/153 (54%), Gaps = 15/153 (9%)
Query: 61 VGSLIGKGGSIVRTFQNETGASIKIADI-LPDSEERIVVISARENSEMRHSPAQDAVMRV 119
VG++IGK G ++ GASIKIA PD++ R+V+I+ ++ + A R+
Sbjct: 260 VGAIIGKQGQHIKQLSRFAGASIKIAPAEAPDAKVRMVIITGPPEAQFK------AQGRI 313
Query: 120 HSRIAEIGF-EPGQAVV--ARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAP 176
+ +I E F P + V A + V S G ++G+GG V+E++ + A + V P+DQ P
Sbjct: 314 YGKIKEENFVSPKEEVKLEAHIRVPSFAAGRVIGKGGKTVNELQNLSSAEV-VVPRDQTP 372
Query: 177 RCGSPHDE-IVQVIGNYHSVQDALFHITSRLRE 208
+D+ +V++ G++++ Q A I L +
Sbjct: 373 ---DENDQVVVKITGHFYACQVAQRKIQEILTQ 402
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 89/196 (45%), Gaps = 21/196 (10%)
Query: 52 FKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKI--ADILPDSEERIVVISARENSEMRH 109
+LL VG++IGK G+ +R +T + I + + +E+ I ++S E +
Sbjct: 41 LRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKSITILSTPEGT---- 96
Query: 110 SPAQDAVMRV-HSRIAEIGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIR 168
S A +++ + H +I F + + ++L H+ +G L+G+ G + ++ + T I
Sbjct: 97 SAACKSILEIMHKEAQDIKF--TEEIPLKILAHNNFVGRLIGKEGRNLKKIEQDTDTKIT 154
Query: 169 VFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRET----IFPMKR-----PGPN 219
+ P Q +P + + V GN + A I ++RE+ I M PG N
Sbjct: 155 ISPL-QELTLYNP-ERTITVKGNVETCAKAEEEIMKKIRESYENDIASMNLQAHLIPGLN 212
Query: 220 -NGHSYLPPFPEMPPP 234
N PP MPPP
Sbjct: 213 LNALGLFPPTSGMPPP 228
>gi|351698877|gb|EHB01796.1| Poly(rC)-binding protein 4 [Heterocephalus glaber]
Length = 443
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 91/214 (42%), Gaps = 61/214 (28%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIA-DILPDSEERIVVISA------- 101
V +L+ + GSLIGK G+ ++ + TGA +++A D+LP+S ER V +S
Sbjct: 142 VTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQVAGDLLPNSTERAVTVSGVPDAIIL 201
Query: 102 ---RENSEMRHSPAQDAVMRVHSRI------------------------AEI-------- 126
+ + + SP + A + H + AE+
Sbjct: 202 CVRQICAVILESPPKGATIPYHPSLSLGTVLLSANQGFSVQGQYGAVTPAEVTKLQQLSG 261
Query: 127 ------------GFEP-GQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKD 173
G +P Q LV + IGC++GR G +SE+R+ +GA I++ +
Sbjct: 262 HAVPFASPSVVPGLDPSAQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKI--GN 319
Query: 174 QAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLR 207
QA G H V + G+ S+ A + IT+ L
Sbjct: 320 QAEGAGERH---VTITGSPVSIALAQYLITACLE 350
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 62/124 (50%), Gaps = 8/124 (6%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMRH 109
+ ++L H +VGS+IGK G V+ + ++ A I I++ ERI I+ + + H
Sbjct: 58 LTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISE--GSCPERITTITG-STAAVFH 114
Query: 110 SPAQDAVMRVHSRIAEIGFEPGQA----VVARLLVHSQQIGCLLGRGGHIVSEMRRATGA 165
+ + A ++ + G V RL++ + Q G L+G+ G + E+R TGA
Sbjct: 115 AVSMIA-FKLDEDLCAAPANGGSVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRETTGA 173
Query: 166 SIRV 169
++V
Sbjct: 174 QVQV 177
Score = 40.8 bits (94), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 36/65 (55%)
Query: 354 EVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATEGVVMVSGTSDQMRAAQSL 413
E ++P + V G S +S IRQ+SGA++ + + GA E V ++G+ + AQ L
Sbjct: 285 EFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQAEGAGERHVTITGSPVSIALAQYL 344
Query: 414 IHAFI 418
I A +
Sbjct: 345 ITACL 349
>gi|355707685|gb|AES03033.1| neuro-oncological ventral antigen 2 [Mustela putorius furo]
Length = 171
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 78/183 (42%), Gaps = 37/183 (20%)
Query: 47 EEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIA---DILPDSEERIVVISARE 103
E E K+L GS+IGKGG + Q ETGA+IK++ D P + ER+ ++
Sbjct: 2 EGEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQG-- 59
Query: 104 NSEMRHSPAQDAVMRVHSRIAE---------------------IGFEPGQAVVARLLVHS 142
+A+ VHS IAE P +A A+L+V +
Sbjct: 60 --------TAEALNAVHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVPN 111
Query: 143 QQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHI 202
G ++G+GG V + +GA +++ Q P + + +V V G V A+ I
Sbjct: 112 STAGLIIGKGGATVKAVMEQSGAWVQL---SQKPEGINLQERVVTVSGEPEQVHKAVSAI 168
Query: 203 TSR 205
+
Sbjct: 169 VQK 171
>gi|73976022|ref|XP_863341.1| PREDICTED: insulin-like growth factor 2 mRNA binding protein 3
isoform 7 [Canis lupus familiaris]
Length = 580
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 83/154 (53%), Gaps = 15/154 (9%)
Query: 61 VGSLIGKGGSIVRTFQNETGASIKIADI-LPDSEERIVVISARENSEMRHSPAQDAVMRV 119
VG++IGK G ++ GASIKIA PD++ R+V+I+ ++ + A R+
Sbjct: 418 VGAIIGKQGQHIKQLSRFAGASIKIAPAEAPDAKVRMVIITGPPEAQFK------AQGRI 471
Query: 120 HSRIAEIGF-EPGQAVV--ARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAP 176
+ +I E F P + V A + V S G ++G+GG V+E++ + A + V P+DQ P
Sbjct: 472 YGKIKEENFVSPKEEVKLEAHIRVPSFAAGRVIGKGGKTVNELQNLSSAEV-VVPRDQTP 530
Query: 177 RCGSPHDE-IVQVIGNYHSVQDALFHITSRLRET 209
+D+ +V++ G++++ Q A I L +
Sbjct: 531 ---DENDQVVVKITGHFYACQVAQRKIQEILTQV 561
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 89/196 (45%), Gaps = 21/196 (10%)
Query: 52 FKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKI--ADILPDSEERIVVISARENSEMRH 109
+LL VG++IGK G+ +R +T + I + + +E+ I ++S E +
Sbjct: 198 LRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKSITILSTPEGT---- 253
Query: 110 SPAQDAVMRV-HSRIAEIGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIR 168
S A +++ + H +I F + + ++L H+ +G L+G+ G + ++ + T I
Sbjct: 254 SAACKSILEIMHKEAQDIKF--TEEIPLKILAHNNFVGRLIGKEGRNLKKIEQDTDTKIT 311
Query: 169 VFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRET----IFPMKR-----PGPN 219
+ P Q +P + + V GN + A I ++RE+ I M PG N
Sbjct: 312 ISPL-QELTLYNP-ERTITVKGNVETCAKAEEEIMKKIRESYENDIASMNLQAHLIPGLN 369
Query: 220 -NGHSYLPPFPEMPPP 234
N PP MPPP
Sbjct: 370 LNALGLFPPTSGMPPP 385
>gi|348537887|ref|XP_003456424.1| PREDICTED: RNA-binding protein Nova-1-like isoform 1 [Oreochromis
niloticus]
Length = 496
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 80/192 (41%), Gaps = 37/192 (19%)
Query: 41 RNRMFYEEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIA---DILPDSEERIV 97
R E E K+L GS+IGKGG + Q ETGA+IK++ D P + ER+
Sbjct: 48 RTNTGEEGEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVC 107
Query: 98 VISARENSEMRHSPAQDAVMRVHSRIAE---------------------IGFEPGQAVVA 136
+I +A+ VH IAE P + A
Sbjct: 108 LIQG----------TVEALNGVHDFIAEKVREMPQSTQKTEPVSILQPQTTVNPDRVKQA 157
Query: 137 RLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQ 196
+L+V + G ++G+GG V + +GA +++ Q P + + +V + G +
Sbjct: 158 KLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQL---SQKPEGINLQERVVTISGEPEQNR 214
Query: 197 DALFHITSRLRE 208
A+ I +++E
Sbjct: 215 KAVEIIVQKIQE 226
>gi|212529012|ref|XP_002144663.1| KH domain RNA binding protein [Talaromyces marneffei ATCC 18224]
gi|210074061|gb|EEA28148.1| KH domain RNA binding protein [Talaromyces marneffei ATCC 18224]
Length = 461
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 91/395 (23%), Positives = 161/395 (40%), Gaps = 74/395 (18%)
Query: 52 FKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMRHSP 111
+ + + + IGKGG V + +GA ++D + ERI+ +S
Sbjct: 106 IRAVISSQEAATCIGKGGENVSQIRRLSGAKCTVSDYSRGAVERILTVSG---------- 155
Query: 112 AQDAVMRVHSRIAE-IGFEPGQAVVA--------RLLVHSQQIGCLLGRGGHIVSEMRRA 162
QDAV + I + EP +A RLL+ IG ++G+GG + E++ A
Sbjct: 156 PQDAVAKAFGLIIRTLNNEPLEAPSTAQSKTYPLRLLIPHILIGSIIGKGGVRIREIQEA 215
Query: 163 TGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKRPGPNNGH 222
+GA R+ D + + V+G +V A +++ L E + +R G
Sbjct: 216 SGA--RLNASDACLPLSTERSLV--VLGVADAVHIATYYVAVTLVEQL--TERFGGPAAS 269
Query: 223 SYLP--------PFPEMPPPPFRPRHNPASPGSYPSPVGPFHSMDRGMGPSQPFDHQAAF 274
+Y M P+ P+ PA G Y P +A
Sbjct: 270 AYATRSGGPAGVVPGGMQVVPYVPQ--PAG-GQYGHP-------------------DSAR 307
Query: 275 SHGMDPMVPPNSDRIPFPYGSERPGHGPTFDRPPSPRSWTPQGVGGGDPRGFDASSG--- 331
H P N+ P PYG+ P GP +P + P GGG R A +G
Sbjct: 308 RH-----YPQNNRPGPGPYGAPYPHGGPAAQ---APVTQPPLHYGGGAARAPYAGAGPHQ 359
Query: 332 ----FTPRNRPVESGNH--AAILTS--TTIEVVIPQLYMAHVYGENNSNLSHIRQISGAN 383
P +P + A +++S T ++ IP + + G+ + ++ IR +SG+
Sbjct: 360 PAPYGAPHAQPHGASTQPLAGVVSSQPITQQIYIPNDMVGAIIGKGGTKINEIRHLSGSV 419
Query: 384 VVVNDPKPGATEGVVMVSGTSDQMRAAQSLIHAFI 418
+ +N+P+ + E +V ++GT + + A +++A +
Sbjct: 420 IKINEPQENSNERLVTITGTQECNQMALYMLYARL 454
>gi|332864859|ref|XP_001157309.2| PREDICTED: insulin-like growth factor 2 mRNA binding protein 3
isoform 1 [Pan troglodytes]
Length = 440
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 83/154 (53%), Gaps = 15/154 (9%)
Query: 61 VGSLIGKGGSIVRTFQNETGASIKIADI-LPDSEERIVVISARENSEMRHSPAQDAVMRV 119
VG++IGK G ++ GASIKIA PD++ R+V+I+ ++ + A R+
Sbjct: 278 VGAIIGKQGQHIKQLSRFAGASIKIAPAEAPDAKVRMVIITGPPEAQFK------AQGRI 331
Query: 120 HSRIAEIGF-EPGQAVV--ARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAP 176
+ +I E F P + V A + V S G ++G+GG V+E++ + A + V P+DQ P
Sbjct: 332 YGKIKEENFVSPKEEVKLEAHIRVPSFAAGRVIGKGGKTVNELQNLSSAEV-VVPRDQTP 390
Query: 177 RCGSPHDE-IVQVIGNYHSVQDALFHITSRLRET 209
+D+ +V++ G++++ Q A I L +
Sbjct: 391 ---DENDQVVVKITGHFYACQVAQRKIQEILTQV 421
>gi|332242553|ref|XP_003270449.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 3
isoform 2 [Nomascus leucogenys]
Length = 440
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 83/154 (53%), Gaps = 15/154 (9%)
Query: 61 VGSLIGKGGSIVRTFQNETGASIKIADI-LPDSEERIVVISARENSEMRHSPAQDAVMRV 119
VG++IGK G ++ GASIKIA PD++ R+V+I+ ++ + A R+
Sbjct: 278 VGAIIGKQGQHIKQLSRFAGASIKIAPAEAPDAKVRMVIITGPPEAQFK------AQGRI 331
Query: 120 HSRIAEIGF-EPGQAVV--ARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAP 176
+ +I E F P + V A + V S G ++G+GG V+E++ + A + V P+DQ P
Sbjct: 332 YGKIKEENFVSPKEEVKLEAHIRVPSFAAGRVIGKGGKTVNELQNLSSAEV-VVPRDQTP 390
Query: 177 RCGSPHDE-IVQVIGNYHSVQDALFHITSRLRET 209
+D+ +V++ G++++ Q A I L +
Sbjct: 391 ---DENDQVVVKITGHFYACQVAQRKIQEILTQV 421
>gi|432895615|ref|XP_004076076.1| PREDICTED: RNA-binding protein Nova-1-like isoform 2 [Oryzias
latipes]
Length = 444
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 80/186 (43%), Gaps = 37/186 (19%)
Query: 47 EEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIA---DILPDSEERIVVISARE 103
E E K+L GS+IGKGG + Q ETGA+IK++ D P + ER+ +I
Sbjct: 3 EGEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQG-- 60
Query: 104 NSEMRHSPAQDAVMRVHSRIAE---------------------IGFEPGQAVVARLLVHS 142
+A+ VH+ IAE P + A+L+V +
Sbjct: 61 --------TVEALNSVHNFIAEKVREMPQSAQKPEPVSILQPQTTVNPDRVKQAKLIVPN 112
Query: 143 QQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHI 202
G ++G+GG V + +GA +++ Q P + + +V + G + A+ I
Sbjct: 113 STAGLIIGKGGATVKAVMEQSGAWVQL---SQKPEGINLQERVVTISGEPEQNRKAVEII 169
Query: 203 TSRLRE 208
+++E
Sbjct: 170 VQKIQE 175
>gi|410952456|ref|XP_003982896.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 3
isoform 2 [Felis catus]
Length = 580
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 83/154 (53%), Gaps = 15/154 (9%)
Query: 61 VGSLIGKGGSIVRTFQNETGASIKIADI-LPDSEERIVVISARENSEMRHSPAQDAVMRV 119
VG++IGK G ++ GASIKIA PD++ R+V+I+ ++ + A R+
Sbjct: 418 VGAIIGKQGQHIKQLSRFAGASIKIAPAEAPDAKVRMVIITGPPEAQFK------AQGRI 471
Query: 120 HSRIAEIGF-EPGQAVV--ARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAP 176
+ +I E F P + V A + V S G ++G+GG V+E++ + A + V P+DQ P
Sbjct: 472 YGKIKEENFVSPKEEVKLEAHIRVPSFAAGRVIGKGGKTVNELQNLSSAEV-VVPRDQTP 530
Query: 177 RCGSPHDE-IVQVIGNYHSVQDALFHITSRLRET 209
+D+ +V++ G++++ Q A I L +
Sbjct: 531 ---DENDQVVVKITGHFYACQVAQRKIQEILTQV 561
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 89/196 (45%), Gaps = 21/196 (10%)
Query: 52 FKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKI--ADILPDSEERIVVISARENSEMRH 109
+LL VG++IGK G+ +R +T + I + + +E+ I ++S E +
Sbjct: 198 LRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKSITILSTPEGT---- 253
Query: 110 SPAQDAVMRV-HSRIAEIGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIR 168
S A +++ + H +I F + + ++L H+ +G L+G+ G + ++ + T I
Sbjct: 254 SAACKSILEIMHKEAQDIKF--TEEIPLKILAHNNFVGRLIGKEGRNLKKIEQDTDTKIT 311
Query: 169 VFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRET----IFPMKR-----PGPN 219
+ P Q +P + + V GN + A I ++RE+ I M PG N
Sbjct: 312 ISPL-QELTLYNP-ERTITVKGNVETCAKAEEEIMKKIRESYENDIASMNLQAHLIPGLN 369
Query: 220 -NGHSYLPPFPEMPPP 234
N PP MPPP
Sbjct: 370 LNALGLFPPTSGMPPP 385
>gi|403287927|ref|XP_003935171.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 3
[Saimiri boliviensis boliviensis]
Length = 579
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 83/154 (53%), Gaps = 15/154 (9%)
Query: 61 VGSLIGKGGSIVRTFQNETGASIKIADI-LPDSEERIVVISARENSEMRHSPAQDAVMRV 119
VG++IGK G ++ GASIKIA PD++ R+V+I+ ++ + A R+
Sbjct: 417 VGAIIGKQGQHIKQLSRFAGASIKIAPAEAPDAKVRMVIITGPPEAQFK------AQGRI 470
Query: 120 HSRIAEIGF-EPGQAVV--ARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAP 176
+ +I E F P + V A + V S G ++G+GG V+E++ + A + V P+DQ P
Sbjct: 471 YGKIKEENFVSPKEEVKLEAHIRVPSFAAGRVIGKGGKTVNELQNLSSAEV-VVPRDQTP 529
Query: 177 RCGSPHDE-IVQVIGNYHSVQDALFHITSRLRET 209
+D+ +V++ G++++ Q A I L +
Sbjct: 530 ---DENDQVVVKITGHFYACQVAQRKIQEILTQV 560
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 89/196 (45%), Gaps = 21/196 (10%)
Query: 52 FKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKI--ADILPDSEERIVVISARENSEMRH 109
+LL VG++IGK G+ +R +T + I + + +E+ I ++S E +
Sbjct: 198 LRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKSITILSTPEGT---- 253
Query: 110 SPAQDAVMRV-HSRIAEIGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIR 168
S A +++ + H +I F + + ++L H+ +G L+G+ G + ++ + T I
Sbjct: 254 SAACKSILEIMHKEAQDIKF--TEEIPLKILAHNNFVGRLIGKEGRNLKKIEQDTDTKIT 311
Query: 169 VFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRET----IFPMKR-----PGPN 219
+ P Q +P + + V GN + A I ++RE+ I M PG N
Sbjct: 312 ISPL-QELTLYNP-ERTITVKGNVETCAKAEEEIMKKIRESYENDIASMNLQAHLIPGLN 369
Query: 220 -NGHSYLPPFPEMPPP 234
N PP MPPP
Sbjct: 370 LNALGLFPPTSGMPPP 385
>gi|296209450|ref|XP_002751548.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 3
[Callithrix jacchus]
Length = 579
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 83/154 (53%), Gaps = 15/154 (9%)
Query: 61 VGSLIGKGGSIVRTFQNETGASIKIADI-LPDSEERIVVISARENSEMRHSPAQDAVMRV 119
VG++IGK G ++ GASIKIA PD++ R+V+I+ ++ + A R+
Sbjct: 417 VGAIIGKQGQHIKQLSRFAGASIKIAPAEAPDAKVRMVIITGPPEAQFK------AQGRI 470
Query: 120 HSRIAEIGF-EPGQAVV--ARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAP 176
+ +I E F P + V A + V S G ++G+GG V+E++ + A + V P+DQ P
Sbjct: 471 YGKIKEENFVSPKEEVKLEAHIRVPSFAAGRVIGKGGKTVNELQNLSSAEV-VVPRDQTP 529
Query: 177 RCGSPHDE-IVQVIGNYHSVQDALFHITSRLRET 209
+D+ +V++ G++++ Q A I L +
Sbjct: 530 ---DENDQVVVKITGHFYACQVAQRKIQEILTQV 560
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 89/196 (45%), Gaps = 21/196 (10%)
Query: 52 FKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKI--ADILPDSEERIVVISARENSEMRH 109
+LL VG++IGK G+ +R +T + I + + +E+ I ++S E +
Sbjct: 198 LRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKSITILSTPEGT---- 253
Query: 110 SPAQDAVMRV-HSRIAEIGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIR 168
S A +++ + H +I F + + ++L H+ +G L+G+ G + ++ + T I
Sbjct: 254 SAACKSILEIMHKEAQDIKF--TEEIPLKILAHNNFVGRLIGKEGRNLKKIEQDTDTKIT 311
Query: 169 VFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRET----IFPMKR-----PGPN 219
+ P Q +P + + V GN + A I ++RE+ I M PG N
Sbjct: 312 ISPL-QELTLYNP-ERTITVKGNVETCAKAEEEIMKKIRESYENDIASMNLQAHLIPGLN 369
Query: 220 -NGHSYLPPFPEMPPP 234
N PP MPPP
Sbjct: 370 LNALGLFPPTSGMPPP 385
>gi|358348269|ref|XP_003638170.1| RNA-binding protein Nova-1, partial [Medicago truncatula]
gi|358348273|ref|XP_003638172.1| RNA-binding protein Nova-1, partial [Medicago truncatula]
gi|355504105|gb|AES85308.1| RNA-binding protein Nova-1, partial [Medicago truncatula]
gi|355504107|gb|AES85310.1| RNA-binding protein Nova-1, partial [Medicago truncatula]
Length = 177
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 77/152 (50%), Gaps = 16/152 (10%)
Query: 47 EEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIA---DILPDSEERIVVISARE 103
E+ + L GS+IGKGGS + FQ+++GA I+++ + P + +RI+++S
Sbjct: 33 EKPTYVRFLVSNSAAGSVIGKGGSTITDFQSQSGARIQLSRNNEFFPGTTDRIIMVSGAI 92
Query: 104 NSEMRHSPAQDAVMRVHSR-IAEIGFEPGQAV----VARLLVHSQQIGCLLGRGGHIVSE 158
N +R AV + S+ ++E+ E V RL+V + G ++G+GG +
Sbjct: 93 NEVLR------AVELILSKLLSELHSEDDNDVEPKTKVRLIVPNGSCGGIIGKGGATIRS 146
Query: 159 MRRATGASIRVFPKDQAPRCGSPHDEIVQVIG 190
+ A I++ P+D + +D IV V G
Sbjct: 147 FIEESQAGIKISPQDNSYY--GQNDRIVTVTG 176
>gi|354490712|ref|XP_003507500.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 3-like
[Cricetulus griseus]
Length = 731
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 81/152 (53%), Gaps = 13/152 (8%)
Query: 61 VGSLIGKGGSIVRTFQNETGASIKIADI-LPDSEERIVVISARENSEMRHSPAQDAVMRV 119
VG++IGK G ++ GASIKIA PD++ R+V+I+ ++ + A R+
Sbjct: 569 VGAIIGKQGQHIKQLSRFAGASIKIAPAEAPDAKVRMVIITGPPEAQFK------AQGRI 622
Query: 120 HSRIAEIGF-EPGQAVV--ARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAP 176
+ +I E F P + V A + V S G ++G+GG V+E++ + A + V P+DQ P
Sbjct: 623 YGKIKEENFVSPKEEVKLEAHIRVPSFAAGRVIGKGGKTVNELQNLSSAEV-VVPRDQTP 681
Query: 177 RCGSPHDEIVQVIGNYHSVQDALFHITSRLRE 208
+ +V++ G++++ Q A I L +
Sbjct: 682 --DENNQVVVKITGHFYACQVAQRKIQEILSQ 711
Score = 42.4 bits (98), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 39/168 (23%), Positives = 74/168 (44%), Gaps = 25/168 (14%)
Query: 52 FKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKI--ADILPDSEERIVVISARENS---- 105
+LL VG++IGK G+ +R +T + I + + +E+ I ++S E +
Sbjct: 350 LRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHRKENTGAAEKPITILSTPEGASAAC 409
Query: 106 ----EMRHSPAQDAVMRVHSRIAEIGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRR 161
E+ H AQD + + V ++L H+ +G L+G+ G + ++ +
Sbjct: 410 KSILEIMHKEAQDTKL-------------TEEVPLKILAHNNFVGRLIGKEGRNLKKIEQ 456
Query: 162 ATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRET 209
T I + P Q +P + + V GN + A I ++RE+
Sbjct: 457 DTDTKITISPL-QELTLYNP-ERTITVKGNVETCARAEEEIMKKIRES 502
>gi|30795212|ref|NP_006538.2| insulin-like growth factor 2 mRNA-binding protein 3 [Homo sapiens]
gi|114612360|ref|XP_001157593.1| PREDICTED: insulin-like growth factor 2 mRNA binding protein 3
isoform 4 [Pan troglodytes]
gi|397472938|ref|XP_003807987.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 3 [Pan
paniscus]
gi|254763311|sp|O00425.2|IF2B3_HUMAN RecName: Full=Insulin-like growth factor 2 mRNA-binding protein 3;
Short=IGF2 mRNA-binding protein 3; Short=IMP-3; AltName:
Full=IGF-II mRNA-binding protein 3; AltName: Full=KH
domain-containing protein overexpressed in cancer;
Short=hKOC; AltName: Full=VICKZ family member 3
gi|4191612|gb|AAD09828.1| IGF-II mRNA-binding protein 3 [Homo sapiens]
gi|40807047|gb|AAH65269.1| Insulin-like growth factor 2 mRNA binding protein 3 [Homo sapiens]
gi|51095013|gb|EAL24257.1| IGF-II mRNA-binding protein 3 [Homo sapiens]
gi|119614193|gb|EAW93787.1| insulin-like growth factor 2 mRNA binding protein 3, isoform CRA_b
[Homo sapiens]
gi|261861412|dbj|BAI47228.1| insulin-like growth factor 2 mRNA binding protein 3 [synthetic
construct]
gi|410216456|gb|JAA05447.1| insulin-like growth factor 2 mRNA binding protein 3 [Pan
troglodytes]
gi|410260770|gb|JAA18351.1| insulin-like growth factor 2 mRNA binding protein 3 [Pan
troglodytes]
gi|410287810|gb|JAA22505.1| insulin-like growth factor 2 mRNA binding protein 3 [Pan
troglodytes]
gi|410334615|gb|JAA36254.1| insulin-like growth factor 2 mRNA binding protein 3 [Pan
troglodytes]
Length = 579
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 83/154 (53%), Gaps = 15/154 (9%)
Query: 61 VGSLIGKGGSIVRTFQNETGASIKIADI-LPDSEERIVVISARENSEMRHSPAQDAVMRV 119
VG++IGK G ++ GASIKIA PD++ R+V+I+ ++ + A R+
Sbjct: 417 VGAIIGKQGQHIKQLSRFAGASIKIAPAEAPDAKVRMVIITGPPEAQFK------AQGRI 470
Query: 120 HSRIAEIGF-EPGQAVV--ARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAP 176
+ +I E F P + V A + V S G ++G+GG V+E++ + A + V P+DQ P
Sbjct: 471 YGKIKEENFVSPKEEVKLEAHIRVPSFAAGRVIGKGGKTVNELQNLSSAEV-VVPRDQTP 529
Query: 177 RCGSPHDE-IVQVIGNYHSVQDALFHITSRLRET 209
+D+ +V++ G++++ Q A I L +
Sbjct: 530 ---DENDQVVVKITGHFYACQVAQRKIQEILTQV 560
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 89/196 (45%), Gaps = 21/196 (10%)
Query: 52 FKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKI--ADILPDSEERIVVISARENSEMRH 109
+LL VG++IGK G+ +R +T + I + + +E+ I ++S E +
Sbjct: 198 LRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKSITILSTPEGT---- 253
Query: 110 SPAQDAVMRV-HSRIAEIGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIR 168
S A +++ + H +I F + + ++L H+ +G L+G+ G + ++ + T I
Sbjct: 254 SAACKSILEIMHKEAQDIKF--TEEIPLKILAHNNFVGRLIGKEGRNLKKIEQDTDTKIT 311
Query: 169 VFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRET----IFPMKR-----PGPN 219
+ P Q +P + + V GN + A I ++RE+ I M PG N
Sbjct: 312 ISPL-QELTLYNP-ERTITVKGNVETCAKAEEEIMKKIRESYENDIASMNLQAHLIPGLN 369
Query: 220 -NGHSYLPPFPEMPPP 234
N PP MPPP
Sbjct: 370 LNALGLFPPTSGMPPP 385
>gi|115497150|ref|NP_001068751.1| poly(rC)-binding protein 4 [Bos taurus]
gi|119390858|sp|Q0VCU0.1|PCBP4_BOVIN RecName: Full=Poly(rC)-binding protein 4; AltName: Full=Alpha-CP4
gi|111304931|gb|AAI20010.1| Poly(rC) binding protein 4 [Bos taurus]
gi|296474781|tpg|DAA16896.1| TPA: poly(rC)-binding protein 4 [Bos taurus]
Length = 403
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 91/214 (42%), Gaps = 61/214 (28%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIA-DILPDSEERIVVISA------- 101
V +L+ + GSLIGK G+ ++ + TGA +++A D+LP+S ER V +S
Sbjct: 102 VTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQVAGDLLPNSTERAVTVSGVPDAIIL 161
Query: 102 ---RENSEMRHSPAQDAVMRVHSRI------------------------AEI-------- 126
+ + + SP + A + H + AE+
Sbjct: 162 CVRQICAVILESPPKGATIPYHPSLSLGTVLLSTNQGFSVQGQYGTVTPAEVTKLQQLSG 221
Query: 127 ------------GFEPG-QAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKD 173
G +P Q LV + IGC++GR G +SE+R+ +GA I++ +
Sbjct: 222 HAVPFASPSMVPGLDPSTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKI--GN 279
Query: 174 QAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLR 207
QA G H V + G+ S+ A + IT+ L
Sbjct: 280 QAEGAGERH---VTITGSPVSIALAQYLITACLE 310
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 62/124 (50%), Gaps = 8/124 (6%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMRH 109
+ ++L H +VGS+IGK G V+ + ++ A I I++ ERI I+ + + H
Sbjct: 18 LTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISE--GSCPERITTITG-STAAVFH 74
Query: 110 SPAQDAVMRVHSRIAEIGFEPGQA----VVARLLVHSQQIGCLLGRGGHIVSEMRRATGA 165
+ + A ++ + G V RL++ + Q G L+G+ G + E+R TGA
Sbjct: 75 AVSMIA-FKLDEDLCAAPANGGNVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRETTGA 133
Query: 166 SIRV 169
++V
Sbjct: 134 QVQV 137
Score = 40.8 bits (94), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 36/65 (55%)
Query: 354 EVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATEGVVMVSGTSDQMRAAQSL 413
E ++P + V G S +S IRQ+SGA++ + + GA E V ++G+ + AQ L
Sbjct: 245 EFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQAEGAGERHVTITGSPVSIALAQYL 304
Query: 414 IHAFI 418
I A +
Sbjct: 305 ITACL 309
>gi|194753778|ref|XP_001959187.1| GF12183 [Drosophila ananassae]
gi|190620485|gb|EDV36009.1| GF12183 [Drosophila ananassae]
Length = 511
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 78/169 (46%), Gaps = 18/169 (10%)
Query: 41 RNRMFYEEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVIS 100
RNR EE V ++L G++IGKGG ++ + + A++ + D ER + IS
Sbjct: 17 RNR--RTEETV-RILIPSSIAGAVIGKGGQHIQKMRTQYKATVSVDD--SQGPERTIQIS 71
Query: 101 ARENSEMRHSPAQDAVMRVHSRIAEIGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSEMR 160
A ++ + + + + + E + RLL+H GC++G+GG + E+R
Sbjct: 72 A----------DIESTLEIITEMLKYFEERDEDFDVRLLIHQSLAGCVIGKGGQKIKEIR 121
Query: 161 RATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRET 209
G + AP+ D +VQ +G V +A+ + + R+T
Sbjct: 122 DRIGCRFLKVFSNVAPQS---TDRVVQTVGKQSQVIEAVREVITLTRDT 167
>gi|73976012|ref|XP_539474.2| PREDICTED: insulin-like growth factor 2 mRNA binding protein 3
isoform 1 [Canis lupus familiaris]
Length = 579
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 83/154 (53%), Gaps = 15/154 (9%)
Query: 61 VGSLIGKGGSIVRTFQNETGASIKIADI-LPDSEERIVVISARENSEMRHSPAQDAVMRV 119
VG++IGK G ++ GASIKIA PD++ R+V+I+ ++ + A R+
Sbjct: 417 VGAIIGKQGQHIKQLSRFAGASIKIAPAEAPDAKVRMVIITGPPEAQFK------AQGRI 470
Query: 120 HSRIAEIGF-EPGQAVV--ARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAP 176
+ +I E F P + V A + V S G ++G+GG V+E++ + A + V P+DQ P
Sbjct: 471 YGKIKEENFVSPKEEVKLEAHIRVPSFAAGRVIGKGGKTVNELQNLSSAEV-VVPRDQTP 529
Query: 177 RCGSPHDE-IVQVIGNYHSVQDALFHITSRLRET 209
+D+ +V++ G++++ Q A I L +
Sbjct: 530 ---DENDQVVVKITGHFYACQVAQRKIQEILTQV 560
Score = 51.2 bits (121), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 89/196 (45%), Gaps = 21/196 (10%)
Query: 52 FKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKI--ADILPDSEERIVVISARENSEMRH 109
+LL VG++IGK G+ +R +T + I + + +E+ I ++S E +
Sbjct: 198 LRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKSITILSTPEGT---- 253
Query: 110 SPAQDAVMRV-HSRIAEIGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIR 168
S A +++ + H +I F + + ++L H+ +G L+G+ G + ++ + T I
Sbjct: 254 SAACKSILEIMHKEAQDIKF--TEEIPLKILAHNNFVGRLIGKEGRNLKKIEQDTDTKIT 311
Query: 169 VFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRET----IFPMKR-----PGPN 219
+ P Q +P + + V GN + A I ++RE+ I M PG N
Sbjct: 312 ISPL-QELTLYNP-ERTITVKGNVETCAKAEEEIMKKIRESYENDIASMNLQAHLIPGLN 369
Query: 220 -NGHSYLPPFPEMPPP 234
N PP MPPP
Sbjct: 370 LNALGLFPPTSGMPPP 385
>gi|392339927|ref|XP_003753941.1| PREDICTED: insulin-like growth factor 2 mRNA binding protein 3
[Rattus norvegicus]
gi|392347297|ref|XP_003749789.1| PREDICTED: insulin-like growth factor 2 mRNA binding protein 3
[Rattus norvegicus]
gi|149033413|gb|EDL88214.1| insulin-like growth factor 2, binding protein 3 [Rattus norvegicus]
Length = 579
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 83/153 (54%), Gaps = 15/153 (9%)
Query: 61 VGSLIGKGGSIVRTFQNETGASIKIADI-LPDSEERIVVISARENSEMRHSPAQDAVMRV 119
VG++IGK G ++ GASIKIA PD++ R+V+I+ ++ + A R+
Sbjct: 417 VGAIIGKQGQHIKQLSRFAGASIKIAPAEAPDAKVRMVIITGPPEAQFK------AQGRI 470
Query: 120 HSRIAEIGF-EPGQAVV--ARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAP 176
+ +I E F P + V A + V S G ++G+GG V+E++ + A + V P+DQ P
Sbjct: 471 YGKIKEENFVSPKEEVKLEAHIRVPSFAAGRVIGKGGKTVNELQNLSSAEV-VVPRDQTP 529
Query: 177 RCGSPHDE-IVQVIGNYHSVQDALFHITSRLRE 208
+D+ +V++ G++++ Q A I L +
Sbjct: 530 ---DENDQVVVKITGHFYACQVAQRKIQEILTQ 559
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 89/196 (45%), Gaps = 21/196 (10%)
Query: 52 FKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKI--ADILPDSEERIVVISARENSEMRH 109
+LL VG++IGK G+ +R +T + I + + +E+ I ++S E +
Sbjct: 198 LRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHRKENTGAAEKSITILSTPEGT---- 253
Query: 110 SPAQDAVMRV-HSRIAEIGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIR 168
S A +++ + H +I F + + ++L H+ +G L+G+ G + ++ + T I
Sbjct: 254 SAACKSILEIMHKEAQDIKF--TEEIPLKILAHNNFVGRLIGKEGRNLKKIEQDTDTKIT 311
Query: 169 VFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRET----IFPMKR-----PGPN 219
+ P Q +P + + V GN + A I ++RE+ I M PG N
Sbjct: 312 ISPL-QELTLYNP-ERTITVKGNVETCAKAEEEIMKKIRESYENDIASMNLQAHLIPGLN 369
Query: 220 -NGHSYLPPFPEMPPP 234
N PP MPPP
Sbjct: 370 LNALGLFPPTSGMPPP 385
>gi|395830897|ref|XP_003788549.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 3
[Otolemur garnettii]
Length = 579
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 83/154 (53%), Gaps = 15/154 (9%)
Query: 61 VGSLIGKGGSIVRTFQNETGASIKIADI-LPDSEERIVVISARENSEMRHSPAQDAVMRV 119
VG++IGK G ++ GASIKIA PD++ R+V+I+ ++ + A R+
Sbjct: 417 VGAIIGKQGQHIKQLSRFAGASIKIAPAEAPDAKVRMVIITGPPEAQFK------AQGRI 470
Query: 120 HSRIAEIGF-EPGQAVV--ARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAP 176
+ +I E F P + V A + V S G ++G+GG V+E++ + A + V P+DQ P
Sbjct: 471 YGKIKEENFVSPKEEVKLEAHIRVPSFAAGRVIGKGGKTVNELQNLSSAEV-VVPRDQTP 529
Query: 177 RCGSPHDE-IVQVIGNYHSVQDALFHITSRLRET 209
+D+ +V++ G++++ Q A I L +
Sbjct: 530 ---DENDQVVVKITGHFYACQVAQRKIQEILTQV 560
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 89/196 (45%), Gaps = 21/196 (10%)
Query: 52 FKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKI--ADILPDSEERIVVISARENSEMRH 109
+LL VG++IGK G+ +R +T + I + + +E+ I ++S E +
Sbjct: 198 LRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKSITILSTPEGT---- 253
Query: 110 SPAQDAVMRV-HSRIAEIGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIR 168
S A +++ + H +I F + + ++L H+ +G L+G+ G + ++ + T I
Sbjct: 254 SAACKSILEIMHKEAQDIKF--TEEIPLKILAHNNFVGRLIGKEGRNLKKIEQDTDTKIT 311
Query: 169 VFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRET----IFPMKR-----PGPN 219
+ P Q +P + + V GN + A I ++RE+ I M PG N
Sbjct: 312 ISPL-QELTLYNP-ERTITVKGNVETCAKAEEEIMKKIRESYENDIASMNLQAHLIPGLN 369
Query: 220 -NGHSYLPPFPEMPPP 234
N PP MPPP
Sbjct: 370 LNALGLFPPTSGMPPP 385
>gi|109067156|ref|XP_001098422.1| PREDICTED: insulin-like growth factor 2 mRNA binding protein 3
isoform 3 [Macaca mulatta]
gi|402863939|ref|XP_003896249.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 3
[Papio anubis]
Length = 579
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 83/154 (53%), Gaps = 15/154 (9%)
Query: 61 VGSLIGKGGSIVRTFQNETGASIKIADI-LPDSEERIVVISARENSEMRHSPAQDAVMRV 119
VG++IGK G ++ GASIKIA PD++ R+V+I+ ++ + A R+
Sbjct: 417 VGAIIGKQGQHIKQLSRFAGASIKIAPAEAPDAKVRMVIITGPPEAQFK------AQGRI 470
Query: 120 HSRIAEIGF-EPGQAVV--ARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAP 176
+ +I E F P + V A + V S G ++G+GG V+E++ + A + V P+DQ P
Sbjct: 471 YGKIKEENFVSPKEEVKLEAHIRVPSFAAGRVIGKGGKTVNELQNLSSAEV-VVPRDQTP 529
Query: 177 RCGSPHDE-IVQVIGNYHSVQDALFHITSRLRET 209
+D+ +V++ G++++ Q A I L +
Sbjct: 530 ---DENDQVVVKITGHFYACQVAQRKIQEILTQV 560
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 89/196 (45%), Gaps = 21/196 (10%)
Query: 52 FKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKI--ADILPDSEERIVVISARENSEMRH 109
+LL VG++IGK G+ +R +T + I + + +E+ I ++S E +
Sbjct: 198 LRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKSITILSTPEGT---- 253
Query: 110 SPAQDAVMRV-HSRIAEIGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIR 168
S A +++ + H +I F + + ++L H+ +G L+G+ G + ++ + T I
Sbjct: 254 SAACKSILEIMHKEAQDIKF--TEEIPLKILAHNNFVGRLIGKEGRNLKKIEQDTDTKIT 311
Query: 169 VFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRET----IFPMKR-----PGPN 219
+ P Q +P + + V GN + A I ++RE+ I M PG N
Sbjct: 312 ISPL-QELTLYNP-ERTITVKGNVETCAKAEEEIMKKIRESYENDIASMNLQAHLIPGLN 369
Query: 220 -NGHSYLPPFPEMPPP 234
N PP MPPP
Sbjct: 370 LNALGLFPPTSGMPPP 385
>gi|449531366|ref|XP_004172657.1| PREDICTED: KH domain-containing protein At4g18375-like [Cucumis
sativus]
Length = 86
Score = 55.8 bits (133), Expect = 4e-05, Method: Composition-based stats.
Identities = 26/69 (37%), Positives = 48/69 (69%)
Query: 351 TTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATEGVVMVSGTSDQMRAA 410
+++E++IP V G+ +N+++IR+ISGA + ++D K + + ++SGTS+Q R A
Sbjct: 16 SSLEMLIPANAAGKVIGKGGANIANIRKISGALIEISDSKSSRGDRIALISGTSEQKRTA 75
Query: 411 QSLIHAFIL 419
++LI AFI+
Sbjct: 76 ENLIQAFIM 84
>gi|332242549|ref|XP_003270447.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 3
isoform 1 [Nomascus leucogenys]
Length = 579
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 83/154 (53%), Gaps = 15/154 (9%)
Query: 61 VGSLIGKGGSIVRTFQNETGASIKIADI-LPDSEERIVVISARENSEMRHSPAQDAVMRV 119
VG++IGK G ++ GASIKIA PD++ R+V+I+ ++ + A R+
Sbjct: 417 VGAIIGKQGQHIKQLSRFAGASIKIAPAEAPDAKVRMVIITGPPEAQFK------AQGRI 470
Query: 120 HSRIAEIGF-EPGQAVV--ARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAP 176
+ +I E F P + V A + V S G ++G+GG V+E++ + A + V P+DQ P
Sbjct: 471 YGKIKEENFVSPKEEVKLEAHIRVPSFAAGRVIGKGGKTVNELQNLSSAEV-VVPRDQTP 529
Query: 177 RCGSPHDE-IVQVIGNYHSVQDALFHITSRLRET 209
+D+ +V++ G++++ Q A I L +
Sbjct: 530 ---DENDQVVVKITGHFYACQVAQRKIQEILTQV 560
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 89/196 (45%), Gaps = 21/196 (10%)
Query: 52 FKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKI--ADILPDSEERIVVISARENSEMRH 109
+LL VG++IGK G+ +R +T + I + + +E+ I ++S E +
Sbjct: 198 LRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKSITILSTPEGT---- 253
Query: 110 SPAQDAVMRV-HSRIAEIGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIR 168
S A +++ + H +I F + + ++L H+ +G L+G+ G + ++ + T I
Sbjct: 254 SAACKSILEIMHKEAQDIKF--TEEIPLKILAHNNFVGRLIGKEGRNLKKIEQDTDTKIT 311
Query: 169 VFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRET----IFPMKR-----PGPN 219
+ P Q +P + + V G+ + A I ++RE+ I M PG N
Sbjct: 312 ISPL-QELTLYNP-ERTITVKGSVETCAKAEEEIMKKIRESYENDIASMNVQTHLIPGLN 369
Query: 220 -NGHSYLPPFPEMPPP 234
N PP MPPP
Sbjct: 370 LNDLGLFPPTSGMPPP 385
>gi|12837891|dbj|BAB23990.1| unnamed protein product [Mus musculus]
Length = 403
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 91/214 (42%), Gaps = 61/214 (28%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIA-DILPDSEERIVVISA------- 101
V +L+ + GSLIGK G+ ++ + TGA +++A D+LP+S ER V +S
Sbjct: 102 VTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQVAGDLLPNSTERAVTVSGVPDAIIL 161
Query: 102 ---RENSEMRHSPAQDAVMRVHSRI------------------------AEI-------- 126
+ + + SP + A + H + AE+
Sbjct: 162 CVRQICAVILESPPKGATIPYHPSLSLGTVLLSANQGFSVQGQYGAVTPAEVTKLQQLSG 221
Query: 127 ------------GFEPG-QAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKD 173
G +P Q LV + IGC++GR G +SE+R+ +GA I++ +
Sbjct: 222 HAVPFASPSVVPGLDPSTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKI--GN 279
Query: 174 QAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLR 207
QA G H V + G+ S+ A + IT+ L
Sbjct: 280 QAEGAGERH---VTITGSPVSIALAQYLITACLE 310
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 62/124 (50%), Gaps = 8/124 (6%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMRH 109
+ ++L H +VGS+IGK G V+ + ++ A I I++ ERI I+ + + H
Sbjct: 18 LTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISE--GSCPERITTITG-STAAVFH 74
Query: 110 SPAQDAVMRVHSRIAEIGFEPGQA----VVARLLVHSQQIGCLLGRGGHIVSEMRRATGA 165
+ + A ++ + G V RL++ + Q G L+G+ G + E+R TGA
Sbjct: 75 AVSMIA-FKLDEDLCAAPANGGSVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRETTGA 133
Query: 166 SIRV 169
++V
Sbjct: 134 QVQV 137
Score = 40.8 bits (94), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 36/65 (55%)
Query: 354 EVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATEGVVMVSGTSDQMRAAQSL 413
E ++P + V G S +S IRQ+SGA++ + + GA E V ++G+ + AQ L
Sbjct: 245 EFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQAEGAGERHVTITGSPVSIALAQYL 304
Query: 414 IHAFI 418
I A +
Sbjct: 305 ITACL 309
>gi|154295229|ref|XP_001548051.1| conserved hypothetical protein [Botryotinia fuckeliana B05.10]
gi|347829292|emb|CCD44989.1| similar to KH domain RNA-binding protein [Botryotinia fuckeliana]
Length = 371
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 86/187 (45%), Gaps = 26/187 (13%)
Query: 32 GPGHETVGGRNRMFYEEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPD 91
GP E + + + E ++ + + + G +IGKGG V ++ETG ++ ++
Sbjct: 32 GPDGEPLPKTDEEYAESQLTLRAIVSSKEAGVIIGKGGKNVADLRDETGVKAGVSKVVQG 91
Query: 92 SEERIVVISARENSEMRHSPAQDAVMRVHSRIAEIGFEPG-----QAVVA-------RLL 139
+R++ IS D++ R +S +A+ E VV+ +LL
Sbjct: 92 VHDRVLTISG----------GCDSISRAYSIVAKALLEGAPQMGMGGVVSNNGTHPIKLL 141
Query: 140 VHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDAL 199
+ Q+G ++GR G + ++ A+G + V K+ P+ + IV+V GN +Q A+
Sbjct: 142 ISHNQMGTIIGRQGLKIKHIQDASGVRM-VAQKEMLPQ---STERIVEVQGNPEGIQKAI 197
Query: 200 FHITSRL 206
+ I L
Sbjct: 198 WEICKCL 204
>gi|297592144|gb|ADI46928.1| CRB1m [Volvox carteri f. nagariensis]
Length = 499
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 67/132 (50%), Gaps = 21/132 (15%)
Query: 49 EVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMR 108
EV + C VG +IG+GG +RT Q +GA I + PD R +VI+
Sbjct: 203 EVQETVECPPGIVGRVIGRGGETIRTLQQASGAHILVNQDFPDGVPRQIVITG------- 255
Query: 109 HSPAQDAVMRVHSRIAE-IGFEPG--QAVVARLLVHSQQ--------IGCLLGRGGHIVS 157
AQDAV R S ++E I + G Q+++ R V S + +G ++G+GG +
Sbjct: 256 ---AQDAVQRATSMVSELIQGDQGNTQSIIQRFGVGSTEVVECPKAMVGRVIGKGGETIK 312
Query: 158 EMRRATGASIRV 169
++++ ASI++
Sbjct: 313 DLQKRFSASIQI 324
Score = 44.7 bits (104), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 73/161 (45%), Gaps = 22/161 (13%)
Query: 54 LLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMRHSPAQ 113
L C DKVG +IG+ G+ +R + T I++ D ++ +++ R++ E Q
Sbjct: 129 LSCPTDKVGRIIGRAGATIRELEASTNTRIQV-DHKALGDKPVIISGRRDDVENAKRVVQ 187
Query: 114 DAVMRVHSRIAEIGFEPGQAVVARLLVHSQQI-GCLLGRGGHIVSEMRRATGASIRV--- 169
D + + + PG V + I G ++GRGG + +++A+GA I V
Sbjct: 188 DLICGSNEAVP-----PGTGEVQETVECPPGIVGRVIGRGGETIRTLQQASGAHILVNQD 242
Query: 170 FPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETI 210
FP D PR Q++ QDA+ TS + E I
Sbjct: 243 FP-DGVPR---------QIV--ITGAQDAVQRATSMVSELI 271
>gi|149641305|ref|XP_001512362.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 3-like
isoform 1 [Ornithorhynchus anatinus]
Length = 584
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 81/151 (53%), Gaps = 15/151 (9%)
Query: 61 VGSLIGKGGSIVRTFQNETGASIKIADIL-PDSEERIVVISARENSEMRHSPAQDAVMRV 119
VG++IGK G ++ GASIKIA PD++ R+V+I+ ++ + A R+
Sbjct: 421 VGAIIGKQGQHIKQLSRFAGASIKIAPAEGPDAKLRVVIITGPPEAQFK------AQGRI 474
Query: 120 HSRIAEIGF---EPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAP 176
+ ++ E F + + A + V S G ++G+GG V+E++ T A + V P+DQ P
Sbjct: 475 YGKLKEENFFGPKEEVKLEAHIKVPSYAAGRVIGKGGKTVNELQNLTSAEV-VVPRDQTP 533
Query: 177 RCGSPHDE-IVQVIGNYHSVQDALFHITSRL 206
+D+ +V++ G++++ Q A I L
Sbjct: 534 ---DENDQVVVKITGHFYACQLAQRKIQEIL 561
>gi|227497228|ref|NP_067542.3| poly(rC)-binding protein 4 [Mus musculus]
gi|14715061|gb|AAH10694.1| Poly(rC) binding protein 4 [Mus musculus]
Length = 403
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 91/214 (42%), Gaps = 61/214 (28%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIA-DILPDSEERIVVISA------- 101
V +L+ + GSLIGK G+ ++ + TGA +++A D+LP+S ER V +S
Sbjct: 102 VTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQVAGDLLPNSTERAVTVSGVPDAIIL 161
Query: 102 ---RENSEMRHSPAQDAVMRVHSRI------------------------AEI-------- 126
+ + + SP + A + H + AE+
Sbjct: 162 CVRQICAVILESPPKGATIPYHPSLSLGTVLLSANQGFSVQGQYGAVTPAEVTKLQQLSG 221
Query: 127 ------------GFEPG-QAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKD 173
G +P Q LV + IGC++GR G +SE+R+ +GA I++ +
Sbjct: 222 HAVPFASPSVVPGLDPSTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKI--GN 279
Query: 174 QAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLR 207
QA G H V + G+ S+ A + IT+ L
Sbjct: 280 QAEGAGERH---VTITGSPVSIALAQYLITACLE 310
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 62/124 (50%), Gaps = 8/124 (6%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMRH 109
+ ++L H +VGS+IGK G V+ + ++ A I I++ ERI I+ + + H
Sbjct: 18 LTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISE--GSCPERITTITG-STAAVFH 74
Query: 110 SPAQDAVMRVHSRIAEIGFEPGQA----VVARLLVHSQQIGCLLGRGGHIVSEMRRATGA 165
+ + A ++ + G V RL++ + Q G L+G+ G + E+R TGA
Sbjct: 75 AVSMIA-FKLDEDLCAAPANGGSVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRETTGA 133
Query: 166 SIRV 169
++V
Sbjct: 134 QVQV 137
Score = 40.8 bits (94), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 36/65 (55%)
Query: 354 EVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATEGVVMVSGTSDQMRAAQSL 413
E ++P + V G S +S IRQ+SGA++ + + GA E V ++G+ + AQ L
Sbjct: 245 EFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQAEGAGERHVTITGSPVSIALAQYL 304
Query: 414 IHAFI 418
I A +
Sbjct: 305 ITACL 309
>gi|410952454|ref|XP_003982895.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 3
isoform 1 [Felis catus]
Length = 579
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 83/154 (53%), Gaps = 15/154 (9%)
Query: 61 VGSLIGKGGSIVRTFQNETGASIKIADI-LPDSEERIVVISARENSEMRHSPAQDAVMRV 119
VG++IGK G ++ GASIKIA PD++ R+V+I+ ++ + A R+
Sbjct: 417 VGAIIGKQGQHIKQLSRFAGASIKIAPAEAPDAKVRMVIITGPPEAQFK------AQGRI 470
Query: 120 HSRIAEIGF-EPGQAVV--ARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAP 176
+ +I E F P + V A + V S G ++G+GG V+E++ + A + V P+DQ P
Sbjct: 471 YGKIKEENFVSPKEEVKLEAHIRVPSFAAGRVIGKGGKTVNELQNLSSAEV-VVPRDQTP 529
Query: 177 RCGSPHDE-IVQVIGNYHSVQDALFHITSRLRET 209
+D+ +V++ G++++ Q A I L +
Sbjct: 530 ---DENDQVVVKITGHFYACQVAQRKIQEILTQV 560
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 89/196 (45%), Gaps = 21/196 (10%)
Query: 52 FKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKI--ADILPDSEERIVVISARENSEMRH 109
+LL VG++IGK G+ +R +T + I + + +E+ I ++S E +
Sbjct: 198 LRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKSITILSTPEGT---- 253
Query: 110 SPAQDAVMRV-HSRIAEIGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIR 168
S A +++ + H +I F + + ++L H+ +G L+G+ G + ++ + T I
Sbjct: 254 SAACKSILEIMHKEAQDIKF--TEEIPLKILAHNNFVGRLIGKEGRNLKKIEQDTDTKIT 311
Query: 169 VFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRET----IFPMKR-----PGPN 219
+ P Q +P + + V GN + A I ++RE+ I M PG N
Sbjct: 312 ISPL-QELTLYNP-ERTITVKGNVETCAKAEEEIMKKIRESYENDIASMNLQAHLIPGLN 369
Query: 220 -NGHSYLPPFPEMPPP 234
N PP MPPP
Sbjct: 370 LNALGLFPPTSGMPPP 385
>gi|300798415|ref|NP_001178812.1| poly(rC)-binding protein 4 [Rattus norvegicus]
Length = 403
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 91/214 (42%), Gaps = 61/214 (28%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIA-DILPDSEERIVVISA------- 101
V +L+ + GSLIGK G+ ++ + TGA +++A D+LP+S ER V +S
Sbjct: 102 VTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQVAGDLLPNSTERAVTVSGVPDAIIL 161
Query: 102 ---RENSEMRHSPAQDAVMRVHSRI------------------------AEI-------- 126
+ + + SP + A + H + AE+
Sbjct: 162 CVRQICAVILESPPKGATIPYHPSLSLGTVLLSANQGFSVQGQYGAVTPAEVTKLQQLSG 221
Query: 127 ------------GFEPG-QAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKD 173
G +P Q LV + IGC++GR G +SE+R+ +GA I++ +
Sbjct: 222 HAVPFASPSVVPGLDPSTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKI--GN 279
Query: 174 QAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLR 207
QA G H V + G+ S+ A + IT+ L
Sbjct: 280 QAEGAGERH---VTITGSPVSIALAQYLITACLE 310
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 62/124 (50%), Gaps = 8/124 (6%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMRH 109
+ ++L H +VGS+IGK G V+ + ++ A I I++ ERI I+ + + H
Sbjct: 18 LTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISE--GSCPERITTITG-STAAVFH 74
Query: 110 SPAQDAVMRVHSRIAEIGFEPGQA----VVARLLVHSQQIGCLLGRGGHIVSEMRRATGA 165
+ + A ++ + G V RL++ + Q G L+G+ G + E+R TGA
Sbjct: 75 AVSMIA-FKLDEDLCAAPANGGSVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRETTGA 133
Query: 166 SIRV 169
++V
Sbjct: 134 QVQV 137
Score = 40.8 bits (94), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 36/65 (55%)
Query: 354 EVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATEGVVMVSGTSDQMRAAQSL 413
E ++P + V G S +S IRQ+SGA++ + + GA E V ++G+ + AQ L
Sbjct: 245 EFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQAEGAGERHVTITGSPVSIALAQYL 304
Query: 414 IHAFI 418
I A +
Sbjct: 305 ITACL 309
>gi|354476373|ref|XP_003500399.1| PREDICTED: poly(rC)-binding protein 4 [Cricetulus griseus]
gi|344252773|gb|EGW08877.1| Poly(rC)-binding protein 4 [Cricetulus griseus]
Length = 403
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 91/214 (42%), Gaps = 61/214 (28%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIA-DILPDSEERIVVISA------- 101
V +L+ + GSLIGK G+ ++ + TGA +++A D+LP+S ER V +S
Sbjct: 102 VTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQVAGDLLPNSTERAVTVSGVPDAIIL 161
Query: 102 ---RENSEMRHSPAQDAVMRVHSRI------------------------AEI-------- 126
+ + + SP + A + H + AE+
Sbjct: 162 CVRQICAVILESPPKGATIPYHPSLSLGTVLLSTNQGFSVQGQYGAVAPAEVTKLQQLSG 221
Query: 127 ------------GFEPG-QAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKD 173
G +P Q LV + IGC++GR G +SE+R+ +GA I++ +
Sbjct: 222 HAVPFASPSVVPGLDPSTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKI--GN 279
Query: 174 QAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLR 207
QA G H V + G+ S+ A + IT+ L
Sbjct: 280 QAEGAGERH---VTITGSPVSIALAQYLITACLE 310
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 62/124 (50%), Gaps = 8/124 (6%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMRH 109
+ ++L H +VGS+IGK G V+ + ++ A I I++ ERI I+ + + H
Sbjct: 18 LTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISE--GSCPERITTITG-STAAVFH 74
Query: 110 SPAQDAVMRVHSRIAEIGFEPGQA----VVARLLVHSQQIGCLLGRGGHIVSEMRRATGA 165
+ + A ++ + G V RL++ + Q G L+G+ G + E+R TGA
Sbjct: 75 AVSMIA-FKLDEDLCAAPANGGSVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRETTGA 133
Query: 166 SIRV 169
++V
Sbjct: 134 QVQV 137
Score = 40.8 bits (94), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 36/65 (55%)
Query: 354 EVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATEGVVMVSGTSDQMRAAQSL 413
E ++P + V G S +S IRQ+SGA++ + + GA E V ++G+ + AQ L
Sbjct: 245 EFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQAEGAGERHVTITGSPVSIALAQYL 304
Query: 414 IHAFI 418
I A +
Sbjct: 305 ITACL 309
>gi|322698027|gb|EFY89801.1| hypothetical protein MAC_04233 [Metarhizium acridum CQMa 102]
Length = 456
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 89/373 (23%), Positives = 157/373 (42%), Gaps = 55/373 (14%)
Query: 60 KVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMRHSPAQDAVMRV 119
+ ++IGKGG V + + A ++D + ERI+ +S A ++R
Sbjct: 118 EAATIIGKGGENVSNIRKMSNAKCTVSDYQKGAVERILTVSGI---------AFGLIIRT 168
Query: 120 HSR--IAEIGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAPR 177
+ + E + RLL+ IG ++G+GG + E++ A+GA R+ D
Sbjct: 169 LNNEPLGEASTASSKTYPLRLLIPHILIGSIIGKGGARIREIQEASGA--RLNASDSCLP 226
Query: 178 CGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKRPGPNNGHSYL----PPFPEMP- 232
S + + V+G +V A +++ S L E + +R G +Y P +P
Sbjct: 227 MSS--ERSLVVMGVADAVHIATYYVGSTLLEQLN--ERFGGPAASAYATRSGAPAGSIPG 282
Query: 233 ---PPPFRPRHNPASPGSYPSPVGPFHSMDRGMGPSQPFDHQAAFSHGMDPMVPPNSDRI 289
P+ P+ PAS G Y P DR + A H PPN +
Sbjct: 283 GMQVVPYSPQ--PAS-GHYGRPENYGRHQDR---RAHHMPPAAYPPHYPHNAAPPNP-AM 335
Query: 290 PFPYGSERPGHG----PTFDRPPSPRSWTPQGVGGGDPRGFDASSGFTPRNRPVESGNHA 345
P YG ++ +G T PP PQ GG P+ P++ G
Sbjct: 336 PMQYGGQQAAYGGAPHATQHMPPH---VGPQPHGG-------------PQGPPMQHGMPG 379
Query: 346 AILTSTTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATEGVVMVSGTSD 405
LT ++ IP + + G+ ++ IRQ+SG+ + +N+P+ + E +V ++GT +
Sbjct: 380 GPLTQ---QIYIPNDMVGAIIGKGGQKINEIRQMSGSVIKINEPQDNSNERLVTITGTEE 436
Query: 406 QMRAAQSLIHAFI 418
R A ++++ +
Sbjct: 437 CNRMALYMLYSRL 449
>gi|332026626|gb|EGI66735.1| RNA-binding protein Nova-1 [Acromyrmex echinatior]
Length = 514
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 41/178 (23%), Positives = 81/178 (45%), Gaps = 34/178 (19%)
Query: 52 FKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIA---DILPDSEERIVVISARENSEMR 108
K+L G++IGKGG + Q +TGA +K++ D P + ER+ +I+
Sbjct: 47 LKVLVPGVAAGAIIGKGGDTIAQLQKDTGARVKMSKSHDFYPGTTERVCLITG------- 99
Query: 109 HSPAQDAVMRVHSRIAE-------------IGFEPGQAVVAR-----LLVHSQQIGCLLG 150
DA+M V I + + F+ G+A R +LV + G ++G
Sbjct: 100 ---TVDAIMEVMEFIMDKIREKPDLTSKTTVDFDSGKATAERDKQVKILVPNSTAGMIIG 156
Query: 151 RGGHIVSEMRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRE 208
+ G+ + +++ +G+ +++ Q + S + + VIG + AL I +++ +
Sbjct: 157 KAGNYIKQIKEESGSYVQI---SQKAKDLSLQERCITVIGEKENNHRALHMILAKVAD 211
>gi|307181420|gb|EFN69015.1| RNA-binding protein Nova-1 [Camponotus floridanus]
Length = 514
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 41/178 (23%), Positives = 81/178 (45%), Gaps = 34/178 (19%)
Query: 52 FKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIA---DILPDSEERIVVISARENSEMR 108
K+L G++IGKGG + Q +TGA +K++ D P + ER+ +I+
Sbjct: 47 LKVLVPGVAAGAIIGKGGDTIAQLQKDTGARVKMSKSHDFYPGTTERVCLITG------- 99
Query: 109 HSPAQDAVMRVHSRIAE-------------IGFEPGQAVVAR-----LLVHSQQIGCLLG 150
DA+M V I + + F+ G+A R +LV + G ++G
Sbjct: 100 ---TVDAIMEVMEFIMDKIREKPDLTSKTTVDFDSGKATAERDKQVKILVPNSTAGMIIG 156
Query: 151 RGGHIVSEMRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRE 208
+ G+ + +++ +G+ +++ Q + S + + VIG + AL I +++ +
Sbjct: 157 KAGNYIKQIKEESGSYVQI---SQKAKDLSLQERCITVIGEKENNHRALHMILAKVAD 211
>gi|301771918|ref|XP_002921377.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 3-like
isoform 1 [Ailuropoda melanoleuca]
Length = 579
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 83/154 (53%), Gaps = 15/154 (9%)
Query: 61 VGSLIGKGGSIVRTFQNETGASIKIADI-LPDSEERIVVISARENSEMRHSPAQDAVMRV 119
VG++IGK G ++ GASIKIA PD++ R+V+I+ ++ + A R+
Sbjct: 417 VGAIIGKQGQHIKQLSRFAGASIKIAPAEAPDAKVRMVIITGPPEAQFK------AQGRI 470
Query: 120 HSRIAEIGF-EPGQAVV--ARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAP 176
+ +I E F P + V A + V S G ++G+GG V+E++ + A + V P+DQ P
Sbjct: 471 YGKIKEENFVSPKEEVKLEAHIRVPSFAAGRVIGKGGKTVNELQNLSSAEV-VVPRDQTP 529
Query: 177 RCGSPHDE-IVQVIGNYHSVQDALFHITSRLRET 209
+D+ +V++ G++++ Q A I L +
Sbjct: 530 ---DENDQVVVKITGHFYACQVAQRKIQEILTQV 560
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 89/196 (45%), Gaps = 21/196 (10%)
Query: 52 FKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKI--ADILPDSEERIVVISARENSEMRH 109
+LL VG++IGK G+ +R +T + I + + +E+ I ++S E +
Sbjct: 198 LRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKSITILSTPEGT---- 253
Query: 110 SPAQDAVMRV-HSRIAEIGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIR 168
S A +++ + H +I F + + ++L H+ +G L+G+ G + ++ + T I
Sbjct: 254 SAACKSILEIMHKEAQDIKF--TEEIPLKILAHNNFVGRLIGKEGRNLKKIEQDTDTKIT 311
Query: 169 VFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRET----IFPMKR-----PGPN 219
+ P Q +P + + V GN + A I ++RE+ I M PG N
Sbjct: 312 ISPL-QELTLYNP-ERTITVKGNVETCAKAEEEIMKKIRESYENDIASMNLQAHLIPGLN 369
Query: 220 -NGHSYLPPFPEMPPP 234
N PP MPPP
Sbjct: 370 LNALGLFPPTSGMPPP 385
>gi|442618212|ref|NP_001262414.1| pasilla, isoform Q [Drosophila melanogaster]
gi|440217246|gb|AGB95796.1| pasilla, isoform Q [Drosophila melanogaster]
Length = 517
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 86/181 (47%), Gaps = 22/181 (12%)
Query: 43 RMFYEEEVVF--KLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIA---DILPDSEERIV 97
R E + K+L G++IGKGG + + Q +TGA +K++ D P + ER+
Sbjct: 2 RKLCSSETTYHMKILVPAVASGAIIGKGGETIASLQKDTGARVKMSKSHDFYPGTTERVC 61
Query: 98 VISARENSEM----------RHSPAQDAVMRVHSRIAEIGFEPGQAVVARLLVHSQQIGC 147
+I+ + M R P D ++ ++ E + V ++LV + G
Sbjct: 62 LITGSTEAIMVVMEFIMDKIREKP--DLTNKIVDTDSKQTQERDKQV--KILVPNSTAGM 117
Query: 148 LLGRGGHIVSEMRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLR 207
++G+GG + +++ +G+ +++ Q P S + + +IG+ + ++A I S++
Sbjct: 118 IIGKGGAFIKQIKEESGSYVQI---SQKPTDVSLQERCITIIGDKENNKNACKMILSKIV 174
Query: 208 E 208
E
Sbjct: 175 E 175
>gi|410931620|ref|XP_003979193.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1-like
[Takifugu rubripes]
Length = 211
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 93/180 (51%), Gaps = 25/180 (13%)
Query: 61 VGSLIGKGGSIVRTFQNETGASIKIADIL-PDSEERIVVISARENSEMRHSPAQDAVMRV 119
VG++IGK G ++ GASIKIA PDS+ R+V+++ ++ + A R+
Sbjct: 34 VGAIIGKKGQHIKQLSRFAGASIKIAPAESPDSKMRMVIVTGPPEAQFK------AQGRI 87
Query: 120 HSRIAEIG-FEPGQAVVARLLVH----SQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQ 174
+ ++ E F P + V +L H + G ++G+GG V+E++ T A + V P++Q
Sbjct: 88 YGKLKEENFFGPKEEV--KLETHIKMAAAAAGRVIGKGGKTVNELQNLTAAEV-VVPREQ 144
Query: 175 APRCGSPHDE-IVQVIGNYHSVQDALFHITSRLRETIFPMKRPGPNNGHSYLPP--FPEM 231
P +D+ IV++ G++++ Q A ++R+ + K+P S P F EM
Sbjct: 145 TP---DENDQVIVKINGHFYASQCA----QRKIRDILMQFKQPQKMGAGSCSTPQGFTEM 197
>gi|301771920|ref|XP_002921378.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 3-like
isoform 2 [Ailuropoda melanoleuca]
Length = 582
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 83/154 (53%), Gaps = 15/154 (9%)
Query: 61 VGSLIGKGGSIVRTFQNETGASIKIADI-LPDSEERIVVISARENSEMRHSPAQDAVMRV 119
VG++IGK G ++ GASIKIA PD++ R+V+I+ ++ + A R+
Sbjct: 420 VGAIIGKQGQHIKQLSRFAGASIKIAPAEAPDAKVRMVIITGPPEAQFK------AQGRI 473
Query: 120 HSRIAEIGF-EPGQAVV--ARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAP 176
+ +I E F P + V A + V S G ++G+GG V+E++ + A + V P+DQ P
Sbjct: 474 YGKIKEENFVSPKEEVKLEAHIRVPSFAAGRVIGKGGKTVNELQNLSSAEV-VVPRDQTP 532
Query: 177 RCGSPHDE-IVQVIGNYHSVQDALFHITSRLRET 209
+D+ +V++ G++++ Q A I L +
Sbjct: 533 ---DENDQVVVKITGHFYACQVAQRKIQEILTQV 563
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 89/196 (45%), Gaps = 21/196 (10%)
Query: 52 FKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKI--ADILPDSEERIVVISARENSEMRH 109
+LL VG++IGK G+ +R +T + I + + +E+ I ++S E +
Sbjct: 198 LRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKSITILSTPEGT---- 253
Query: 110 SPAQDAVMRV-HSRIAEIGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIR 168
S A +++ + H +I F + + ++L H+ +G L+G+ G + ++ + T I
Sbjct: 254 SAACKSILEIMHKEAQDIKF--TEEIPLKILAHNNFVGRLIGKEGRNLKKIEQDTDTKIT 311
Query: 169 VFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRET----IFPMKR-----PGPN 219
+ P Q +P + + V GN + A I ++RE+ I M PG N
Sbjct: 312 ISPL-QELTLYNP-ERTITVKGNVETCAKAEEEIMKKIRESYENDIASMNLQAHLIPGLN 369
Query: 220 -NGHSYLPPFPEMPPP 234
N PP MPPP
Sbjct: 370 LNALGLFPPTSGMPPP 385
>gi|395738667|ref|XP_003780758.1| PREDICTED: LOW QUALITY PROTEIN: insulin-like growth factor 2
mRNA-binding protein 3 [Pongo abelii]
Length = 567
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 83/154 (53%), Gaps = 15/154 (9%)
Query: 61 VGSLIGKGGSIVRTFQNETGASIKIADI-LPDSEERIVVISARENSEMRHSPAQDAVMRV 119
VG++IGK G ++ GASIKIA PD++ R+V+I+ ++ + A R+
Sbjct: 405 VGAIIGKQGQHIKQLSRFAGASIKIAPAEAPDAKVRMVIITGPPEAQFK------AQGRI 458
Query: 120 HSRIAEIGF-EPGQAVV--ARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAP 176
+ +I E F P + V A + V S G ++G+GG V+E++ + A + V P+DQ P
Sbjct: 459 YGKIKEENFVSPKEEVKLEAHIRVPSFAAGRVIGKGGKTVNELQNLSSAEV-VVPRDQTP 517
Query: 177 RCGSPHDE-IVQVIGNYHSVQDALFHITSRLRET 209
+D+ +V++ G++++ Q A I L +
Sbjct: 518 ---DENDQVVVKITGHFYACQVAQRKIQEILTQV 548
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 89/196 (45%), Gaps = 21/196 (10%)
Query: 52 FKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKI--ADILPDSEERIVVISARENSEMRH 109
+LL VG++IGK G+ +R +T + I + + +E+ I ++S E +
Sbjct: 186 LRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKSITILSTPEGT---- 241
Query: 110 SPAQDAVMRV-HSRIAEIGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIR 168
S A +++ + H +I F + + ++L H+ +G L+G+ G + ++ + T I
Sbjct: 242 SAACKSILEIMHKEAQDIKF--TEEIPLKILAHNNFVGRLIGKEGRNLKKIEQDTDTKIT 299
Query: 169 VFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRET----IFPMKR-----PGPN 219
+ P Q +P + + V GN + A I ++RE+ I M PG N
Sbjct: 300 ISPL-QELTLYNP-ERTITVKGNVETCAKAEEEIMKKIRESYENDIASMNLQAHLIPGLN 357
Query: 220 -NGHSYLPPFPEMPPP 234
N PP MPPP
Sbjct: 358 LNALGLFPPTSGMPPP 373
>gi|161078120|ref|NP_001036697.1| pasilla, isoform J [Drosophila melanogaster]
gi|19527741|gb|AAL89985.1| AT03366p [Drosophila melanogaster]
gi|113194765|gb|ABI31154.1| pasilla, isoform J [Drosophila melanogaster]
Length = 539
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 83/170 (48%), Gaps = 20/170 (11%)
Query: 52 FKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIA---DILPDSEERIVVISARENSEM- 107
K+L G++IGKGG + + Q +TGA +K++ D P + ER+ +I+ + M
Sbjct: 35 MKILVPAVASGAIIGKGGETIASLQKDTGARVKMSKSHDFYPGTTERVCLITGSTEAIMV 94
Query: 108 ---------RHSPAQDAVMRVHSRIAEIGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSE 158
R P D ++ ++ E + V ++LV + G ++G+GG + +
Sbjct: 95 VMEFIMDKIREKP--DLTNKIVDTDSKQTQERDKQV--KILVPNSTAGMIIGKGGAFIKQ 150
Query: 159 MRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRE 208
++ +G+ +++ Q P S + + +IG+ + ++A I S++ E
Sbjct: 151 IKEESGSYVQI---SQKPTDVSLQERCITIIGDKENNKNACKMILSKIVE 197
>gi|322780737|gb|EFZ09994.1| hypothetical protein SINV_05815 [Solenopsis invicta]
Length = 483
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 41/178 (23%), Positives = 81/178 (45%), Gaps = 34/178 (19%)
Query: 52 FKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIA---DILPDSEERIVVISARENSEMR 108
K+L G++IGKGG + Q +TGA +K++ D P + ER+ +I+
Sbjct: 16 LKVLVPGVAAGAIIGKGGDTIAQLQKDTGARVKMSKSHDFYPGTTERVCLITG------- 68
Query: 109 HSPAQDAVMRVHSRIAE-------------IGFEPGQAVVAR-----LLVHSQQIGCLLG 150
DA+M V I + + F+ G+A R +LV + G ++G
Sbjct: 69 ---TVDAIMEVMEFIMDKIREKPDLTSKTTVDFDSGKATAERDKQVKILVPNSTAGMIIG 125
Query: 151 RGGHIVSEMRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRE 208
+ G+ + +++ +G+ +++ Q + S + + VIG + AL I +++ +
Sbjct: 126 KAGNYIKQIKEESGSYVQI---SQKAKDLSLQERCITVIGEKENNHRALHMILAKVAD 180
>gi|380792087|gb|AFE67919.1| poly(rC)-binding protein 2 isoform g, partial [Macaca mulatta]
Length = 193
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 66/124 (53%), Gaps = 8/124 (6%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMRH 109
+ +LL H +VGS+IGK G V+ + E+GA I I++ + ERI+ ++ N+ +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISE--GNCPERIITLAGPTNAIFKA 71
Query: 110 SPAQDAVMRVHSRIAEIGFEPGQA----VVARLLVHSQQIGCLLGRGGHIVSEMRRATGA 165
+ ++ I+ A V RL+V + Q G L+G+GG + E+R +TGA
Sbjct: 72 FAM--IIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGA 129
Query: 166 SIRV 169
++V
Sbjct: 130 QVQV 133
Score = 44.3 bits (103), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 34/52 (65%), Gaps = 1/52 (1%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIA-DILPDSEERIVVIS 100
V +L+ + GSLIGKGG ++ + TGA +++A D+LP+S ER + I+
Sbjct: 98 VTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIA 149
>gi|348581993|ref|XP_003476761.1| PREDICTED: poly(rC)-binding protein 4 isoform 1 [Cavia porcellus]
Length = 403
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 91/214 (42%), Gaps = 61/214 (28%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIA-DILPDSEERIVVISA------- 101
V +L+ + GSLIGK G+ ++ + TGA +++A D+LP+S ER V +S
Sbjct: 102 VTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQVAGDLLPNSTERAVTVSGVPDAIIL 161
Query: 102 ---RENSEMRHSPAQDAVMRVHSRI------------------------AEI-------- 126
+ + + SP + A + H + AE+
Sbjct: 162 CVRQICAVILESPPKGATIPYHPSLSLGTVLLSANQGFSVQGQYGAVTPAEVTKLQQLSG 221
Query: 127 ------------GFEP-GQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKD 173
G +P Q LV + IGC++GR G +SE+R+ +GA I++ +
Sbjct: 222 HAVPFASPSVVPGLDPAAQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKI--GN 279
Query: 174 QAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLR 207
QA G H + + G+ S+ A + IT+ L
Sbjct: 280 QAEGAGERH---ITITGSPVSIALAQYLITACLE 310
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 62/124 (50%), Gaps = 8/124 (6%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMRH 109
+ ++L H +VGS+IGK G V+ + ++ A I I++ ERI I+ + + H
Sbjct: 18 LTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISE--GSCPERITTITG-STAAVFH 74
Query: 110 SPAQDAVMRVHSRIAEIGFEPGQA----VVARLLVHSQQIGCLLGRGGHIVSEMRRATGA 165
+ + A ++ + G V RL++ + Q G L+G+ G + E+R TGA
Sbjct: 75 AVSMIA-FKLDEDLCAAPANGGSVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRETTGA 133
Query: 166 SIRV 169
++V
Sbjct: 134 QVQV 137
Score = 40.4 bits (93), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 36/65 (55%)
Query: 354 EVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATEGVVMVSGTSDQMRAAQSL 413
E ++P + V G S +S IRQ+SGA++ + + GA E + ++G+ + AQ L
Sbjct: 245 EFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQAEGAGERHITITGSPVSIALAQYL 304
Query: 414 IHAFI 418
I A +
Sbjct: 305 ITACL 309
>gi|299116377|emb|CBN74642.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 762
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 74/156 (47%), Gaps = 12/156 (7%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIA---DILPDSEERIVVISARENSE 106
V + + G LIGKGGS ++ + +GA +++A + DS ERIV + + N
Sbjct: 214 TVVRWIMDNAHCGWLIGKGGSGIQNIEATSGAQVRVATERSLGKDSAERIVYV--KGNKS 271
Query: 107 MRHSPAQDAVMRVHSRIAEIGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGAS 166
R + + ++R + +I P + VA + V S+ +G +LG G + + TGA
Sbjct: 272 QREAALE--LIRTNPKITGRVASPSEPEVAAVHVPSKAVGFILGHRGASIQALTEKTGAQ 329
Query: 167 IRVFPKDQAPRCGSPHDEIV-----QVIGNYHSVQD 197
+RV + G H + Q++ H++QD
Sbjct: 330 LRVASGSEVTTGGGEHRVDITGGPKQIVAARHALQD 365
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 79/189 (41%), Gaps = 45/189 (23%)
Query: 52 FKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADI--LPD-SEERIVVIS-------- 100
++C D +G LIGKGGS +R Q +TG + + + +P+ ++ER V +S
Sbjct: 99 LSIMCPSDAMGMLIGKGGSGLREMQEKTGVKVSLQETKSIPEGAKERGVGLSGSLDCVAN 158
Query: 101 ----------ARENSEMRHSPAQDAVMRVHSRIAEIGFEPGQA------------VVARL 138
AR + + SPA++ + G EP A V R
Sbjct: 159 VEKLIFEKLNARRVTSLAPSPAEEEFEMAYEAAKAAGIEPNGATDVSDMNDPNKITVVRW 218
Query: 139 LVHSQQIGCLLGRGGHIVSEMRRATGASIRV-----FPKDQAPRCGSPHDEIVQVIGNYH 193
++ + G L+G+GG + + +GA +RV KD A R IV V GN
Sbjct: 219 IMDNAHCGWLIGKGGSGIQNIEATSGAQVRVATERSLGKDSAER-------IVYVKGNKS 271
Query: 194 SVQDALFHI 202
+ AL I
Sbjct: 272 QREAALELI 280
>gi|300796214|ref|NP_001179217.1| insulin-like growth factor 2 mRNA-binding protein 3 [Bos taurus]
gi|296488613|tpg|DAA30726.1| TPA: insulin-like growth factor 2 mRNA binding protein 3 [Bos
taurus]
Length = 580
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 83/154 (53%), Gaps = 15/154 (9%)
Query: 61 VGSLIGKGGSIVRTFQNETGASIKIADI-LPDSEERIVVISARENSEMRHSPAQDAVMRV 119
VG++IGK G ++ GASIKIA PD++ R+V+I+ ++ + A R+
Sbjct: 418 VGAIIGKQGQHIKQLSRFAGASIKIAPAEAPDAKVRMVIITGPPEAQFK------AQGRI 471
Query: 120 HSRIAEIGF-EPGQAVV--ARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAP 176
+ +I E F P + V A + V S G ++G+GG V+E++ + A + V P+DQ P
Sbjct: 472 YGKIKEENFVSPKEEVKLEAHIRVPSFAAGRVIGKGGKTVNELQNLSSAEV-VVPRDQTP 530
Query: 177 RCGSPHDE-IVQVIGNYHSVQDALFHITSRLRET 209
+D+ +V++ G++++ Q A I L +
Sbjct: 531 ---DENDQVVVKITGHFYACQVAQRKIQEILTQV 561
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 89/196 (45%), Gaps = 21/196 (10%)
Query: 52 FKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKI--ADILPDSEERIVVISARENSEMRH 109
+LL VG++IGK G+ +R +T + I + + +E+ I ++S E +
Sbjct: 198 LRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKSITILSTPEGT---- 253
Query: 110 SPAQDAVMRV-HSRIAEIGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIR 168
S A +++ + H +I F + + ++L H+ +G L+G+ G + ++ + T I
Sbjct: 254 SAACKSILEIMHKEAQDIKF--TEEIPLKILAHNNFVGRLIGKEGRNLKKIEQDTDTKIT 311
Query: 169 VFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRET----IFPMKR-----PGPN 219
+ P Q +P + + V GN + A I ++RE+ I M PG N
Sbjct: 312 ISPL-QELTLYNP-ERTITVKGNVETCAKAEEEIMKKIRESYENDIASMNLQAHLIPGLN 369
Query: 220 -NGHSYLPPFPEMPPP 234
N PP MPPP
Sbjct: 370 LNALGLFPPTSGMPPP 385
>gi|33150676|gb|AAP97216.1|AF092441_1 CBP [Homo sapiens]
Length = 397
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 67/260 (25%), Positives = 112/260 (43%), Gaps = 64/260 (24%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIA-DILPDSEERIV---------VI 99
V +L+ + GSLIG+ G+ ++ + TGA +++A D+ P+S ER V ++
Sbjct: 102 VTLRLVIPASQCGSLIGQAGTKIKEIRETTGAQVQVAGDLFPNSTERAVTVSGVPDAIIL 161
Query: 100 SARE-NSEMRHSPAQDAVMRVH------------------------------SRIAEI-- 126
R+ + + SP + A + H +++ ++
Sbjct: 162 CVRQICAVILESPPKGATIPYHPSLSLGTVLLSANQGFSVQGQYGAVTQREVTKLQQLSS 221
Query: 127 ------------GFEPG-QAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKD 173
G +PG Q LV + IGC++GR G +SE+R+ +GA I++ +
Sbjct: 222 HAVPFATPSVVPGLDPGTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKI--GN 279
Query: 174 QAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKRPGPNNGHSYLP-PF-PEM 231
QA G H V + G+ S+ A + IT+ L ET P++ + LP PF P +
Sbjct: 280 QAEGAGERH---VTITGSPVSIALAQYLITACL-ETAKSTSGGTPSSAPADLPAPFSPPL 335
Query: 232 PPPPFRPRHNPASPGSYPSP 251
P P A P PSP
Sbjct: 336 TALPQLPLACWAHPMPSPSP 355
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 62/124 (50%), Gaps = 8/124 (6%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMRH 109
+ ++L H +VGS+IGK G V+ + ++ A I I++ ERI I+ + + H
Sbjct: 18 LTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISE--GSFLERITTITG-STAAVFH 74
Query: 110 SPAQDAVMRVHSRIAEIGFEPGQA----VVARLLVHSQQIGCLLGRGGHIVSEMRRATGA 165
+ + A ++ + G V RL++ + Q G L+G+ G + E+R TGA
Sbjct: 75 AVSMIA-FKLDEDLCAAPANGGNVSRPPVTLRLVIPASQCGSLIGQAGTKIKEIRETTGA 133
Query: 166 SIRV 169
++V
Sbjct: 134 QVQV 137
Score = 41.2 bits (95), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 36/65 (55%)
Query: 354 EVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATEGVVMVSGTSDQMRAAQSL 413
E ++P + V G S +S IRQ+SGA++ + + GA E V ++G+ + AQ L
Sbjct: 245 EFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQAEGAGERHVTITGSPVSIALAQYL 304
Query: 414 IHAFI 418
I A +
Sbjct: 305 ITACL 309
>gi|426227473|ref|XP_004007842.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 3
isoform 2 [Ovis aries]
Length = 441
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 83/154 (53%), Gaps = 15/154 (9%)
Query: 61 VGSLIGKGGSIVRTFQNETGASIKIADI-LPDSEERIVVISARENSEMRHSPAQDAVMRV 119
VG++IGK G ++ GASIKIA PD++ R+V+I+ ++ + A R+
Sbjct: 279 VGAIIGKQGQHIKQLSRFAGASIKIAPAEAPDAKVRMVIITGPPEAQFK------AQGRI 332
Query: 120 HSRIAEIGF-EPGQAVV--ARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAP 176
+ +I E F P + V A + V S G ++G+GG V+E++ + A + V P+DQ P
Sbjct: 333 YGKIKEENFVSPKEEVKLEAHIRVPSFAAGRVIGKGGKTVNELQNLSSAEV-VVPRDQTP 391
Query: 177 RCGSPHDE-IVQVIGNYHSVQDALFHITSRLRET 209
+D+ +V++ G++++ Q A I L +
Sbjct: 392 ---DENDQVVVKITGHFYACQVAQRKIQEILTQV 422
>gi|12230430|sp|P57724.1|PCBP4_MOUSE RecName: Full=Poly(rC)-binding protein 4; AltName: Full=Alpha-CP4
gi|9957163|gb|AAG09239.1|AF176328_1 alphaCP-4 [Mus musculus]
Length = 403
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 91/214 (42%), Gaps = 61/214 (28%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIA-DILPDSEERIVVISA------- 101
V +L+ + GSLIGK G+ ++ + TGA +++A D+LP+S ER V +S
Sbjct: 102 VTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQVAGDLLPNSTERAVTVSGVPDAIIL 161
Query: 102 ---RENSEMRHSPAQDAVMRVHSRI------------------------AEI-------- 126
+ + + SP + A + H + AE+
Sbjct: 162 CVRQICAVILESPPKGATIPYHPSLSLGTVLLSANQGFSVQGQYGAVTPAEVTKLQQLSG 221
Query: 127 ------------GFEPG-QAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKD 173
G +P Q LV + IGC++GR G +SE+R+ +GA I++ +
Sbjct: 222 HAVPFASPSVVPGMDPSTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKI--GN 279
Query: 174 QAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLR 207
QA G H V + G+ S+ A + IT+ L
Sbjct: 280 QAEGAGERH---VTITGSPVSIALAQYLITACLE 310
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 62/124 (50%), Gaps = 8/124 (6%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMRH 109
+ ++L H +VGS+IGK G V+ + ++ A I I++ ERI I+ + + H
Sbjct: 18 LTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISE--GSCPERITTITG-STAAVFH 74
Query: 110 SPAQDAVMRVHSRIAEIGFEPGQA----VVARLLVHSQQIGCLLGRGGHIVSEMRRATGA 165
+ + A ++ + G V RL++ + Q G L+G+ G + E+R TGA
Sbjct: 75 AVSMIA-FKLDEDLCAAPANGGSVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRETTGA 133
Query: 166 SIRV 169
++V
Sbjct: 134 QVQV 137
Score = 40.8 bits (94), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 36/65 (55%)
Query: 354 EVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATEGVVMVSGTSDQMRAAQSL 413
E ++P + V G S +S IRQ+SGA++ + + GA E V ++G+ + AQ L
Sbjct: 245 EFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQAEGAGERHVTITGSPVSIALAQYL 304
Query: 414 IHAFI 418
I A +
Sbjct: 305 ITACL 309
>gi|125559909|gb|EAZ05357.1| hypothetical protein OsI_27561 [Oryza sativa Indica Group]
gi|125601956|gb|EAZ41281.1| hypothetical protein OsJ_25788 [Oryza sativa Japonica Group]
Length = 700
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 80/163 (49%), Gaps = 13/163 (7%)
Query: 59 DKVGSLIGKGGSIVRTFQNETGASIKI-------ADILPDSEERIVVISARENSE--MRH 109
+KVG LIGK G +R Q +GA I+I A+ S E + + + + +E +++
Sbjct: 161 NKVGVLIGKSGETIRNLQMNSGAKIQITKDAEADANAPTRSVELVGTLESIDKAERLIKN 220
Query: 110 SPAQDAVMRVHSRIAEIGFEPGQAVVAR--LLVHSQQIGCLLGRGGHIVSEMRRATGASI 167
A+ + IA GF GQ+ + +LV ++G ++G+GG + ++ +GA I
Sbjct: 221 VIAEADAGGSPALIAR-GFGSGQSGSEQFEMLVPDNKVGLIIGKGGETIKTLQTRSGARI 279
Query: 168 RVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETI 210
++ P+ P + + V++ GN ++ A I + +T
Sbjct: 280 QLIPQ-HPPEGVTLTERTVRITGNKKQIEAAKDMIKQAMSQTF 321
>gi|327265639|ref|XP_003217615.1| PREDICTED: poly(rC)-binding protein 4-like [Anolis carolinensis]
Length = 422
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 61/253 (24%), Positives = 101/253 (39%), Gaps = 65/253 (25%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIA-DILPDSEERIVVISARENSEMR 108
V +L+ + GSLIGK G+ ++ + TGA +++A D+LP+S ER V +S ++ ++
Sbjct: 112 VTLRLVIPASQCGSLIGKAGAKIKEIRETTGAQVQVAGDLLPNSTERAVTVSGVPDAIIQ 171
Query: 109 ----------HSPAQDAVMRVHSRI--------AEIGFEP-------GQAVVARL----- 138
SP + A + H + A GF QA VA+L
Sbjct: 172 CVRQICAVILESPPKGATIPYHPNLSLGPVLLSANQGFSMQGQYGGISQAEVAKLQQLSG 231
Query: 139 -----------------------------LVHSQQIGCLLGRGGHIVSEMRRATGASIRV 169
LV + IGC++GR G +SE+R+ +GA I++
Sbjct: 232 HPVSFSSLGQTPSIVAGLDTNSQNSSQEFLVPNDLIGCIIGRQGSKISEIRQMSGAHIKI 291
Query: 170 FPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKRPGPNNGHSYLPPFP 229
+Q H V + G S+ A + I++ L + P + G ++ P
Sbjct: 292 --GNQTEGSAERH---VTITGTPVSITLAQYLISACLETAKSTSQTPPVDLGMTFSQPLT 346
Query: 230 EMPPPPFRPRHNP 242
P P P
Sbjct: 347 PSPAPTLTAVAAP 359
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 64/132 (48%), Gaps = 24/132 (18%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMRH 109
+ ++L H +VGS+IGK G V+ + ++ A I I++ ERI I+
Sbjct: 28 LTLRMLMHGKEVGSIIGKKGETVKRIREQSTARITISE--GSCPERITTITG-------- 77
Query: 110 SPAQDAVMRVHSRIA-EIGFEPGQA-----------VVARLLVHSQQIGCLLGRGGHIVS 157
+ DAV R S IA ++ + G V RL++ + Q G L+G+ G +
Sbjct: 78 --STDAVFRAVSMIAFKLEEDLGTGAINGGTVSKPPVTLRLVIPASQCGSLIGKAGAKIK 135
Query: 158 EMRRATGASIRV 169
E+R TGA ++V
Sbjct: 136 EIRETTGAQVQV 147
Score = 41.2 bits (95), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 36/65 (55%)
Query: 354 EVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATEGVVMVSGTSDQMRAAQSL 413
E ++P + + G S +S IRQ+SGA++ + + G+ E V ++GT + AQ L
Sbjct: 259 EFLVPNDLIGCIIGRQGSKISEIRQMSGAHIKIGNQTEGSAERHVTITGTPVSITLAQYL 318
Query: 414 IHAFI 418
I A +
Sbjct: 319 ISACL 323
>gi|410914634|ref|XP_003970792.1| PREDICTED: RNA-binding protein Nova-1-like [Takifugu rubripes]
Length = 501
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 44/187 (23%), Positives = 82/187 (43%), Gaps = 27/187 (14%)
Query: 41 RNRMFYEEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIA---DILPDSEERIV 97
R E E K+L GS+IGKGG + Q ETGA+IK++ D P + ER+
Sbjct: 54 RTNTGEEGEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVC 113
Query: 98 VI----------------SARENSEMRHSPAQDAVMRVHSRIAEIGFEPGQAVVARLLVH 141
+I RE + P ++++ + + P + A+++V
Sbjct: 114 LIQGTVEALNGVHNFIAEKVREMPQSAQKPEPVSILQPQTTV-----NPDRVKQAKIIVP 168
Query: 142 SQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFH 201
+ G ++G+GG V + +GA +++ Q P + + +V + G + A+
Sbjct: 169 NSTAGLIIGKGGATVKAVMEQSGAWVQL---SQKPEGINLQERVVTISGEPEQNRKAVEI 225
Query: 202 ITSRLRE 208
I +++E
Sbjct: 226 IVQKIQE 232
>gi|426227471|ref|XP_004007841.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 3
isoform 1 [Ovis aries]
Length = 580
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 83/154 (53%), Gaps = 15/154 (9%)
Query: 61 VGSLIGKGGSIVRTFQNETGASIKIADI-LPDSEERIVVISARENSEMRHSPAQDAVMRV 119
VG++IGK G ++ GASIKIA PD++ R+V+I+ ++ + A R+
Sbjct: 418 VGAIIGKQGQHIKQLSRFAGASIKIAPAEAPDAKVRMVIITGPPEAQFK------AQGRI 471
Query: 120 HSRIAEIGF-EPGQAVV--ARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAP 176
+ +I E F P + V A + V S G ++G+GG V+E++ + A + V P+DQ P
Sbjct: 472 YGKIKEENFVSPKEEVKLEAHIRVPSFAAGRVIGKGGKTVNELQNLSSAEV-VVPRDQTP 530
Query: 177 RCGSPHDE-IVQVIGNYHSVQDALFHITSRLRET 209
+D+ +V++ G++++ Q A I L +
Sbjct: 531 ---DENDQVVVKITGHFYACQVAQRKIQEILTQV 561
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 89/196 (45%), Gaps = 21/196 (10%)
Query: 52 FKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKI--ADILPDSEERIVVISARENSEMRH 109
+LL VG++IGK G+ +R +T + I + + +E+ I ++S E +
Sbjct: 198 LRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKSITILSTPEGT---- 253
Query: 110 SPAQDAVMRV-HSRIAEIGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIR 168
S A +++ + H +I F + + ++L H+ +G L+G+ G + ++ + T I
Sbjct: 254 SAACKSILEIMHKEAQDIKF--TEEIPLKILAHNNFVGRLIGKEGRNLKKIEQDTDTKIT 311
Query: 169 VFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRET----IFPMKR-----PGPN 219
+ P Q +P + + V GN + A I ++RE+ I M PG N
Sbjct: 312 ISPL-QELTLYNP-ERTITVKGNVETCAKAEEEIMKKIRESYENDIASMNLQAHLIPGLN 369
Query: 220 -NGHSYLPPFPEMPPP 234
N PP MPPP
Sbjct: 370 LNALGLFPPTSGMPPP 385
>gi|18858571|ref|NP_571566.1| insulin-like growth factor 2 mRNA-binding protein 3 [Danio rerio]
gi|82248267|sp|Q9PW80.1|IF2B3_DANRE RecName: Full=Insulin-like growth factor 2 mRNA-binding protein 3;
Short=IGF2 mRNA-binding protein 3; Short=IMP-3; AltName:
Full=Decapentaplegic and Vg-related 1 RNA-binding
protein; AltName: Full=IGF-II mRNA-binding protein 3;
AltName: Full=VICKZ family member 3; AltName: Full=Vg1
RNA-binding protein; Short=Vg1-RBP
gi|5596632|gb|AAD45610.1|AF161270_1 Vg1 RNA binding protein [Danio rerio]
gi|28278436|gb|AAH45873.1| Insulin-like growth factor 2 mRNA binding protein 3 [Danio rerio]
gi|182889884|gb|AAI65768.1| Igf2bp3 protein [Danio rerio]
Length = 582
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 108/213 (50%), Gaps = 36/213 (16%)
Query: 19 GYAPGYHSRGYS----SGP------GHETVGGRNRMFYEEEVVFKLLCHLDKVGSLIGKG 68
G PG S G S SGP G+++ G + E E V + L VG++IGK
Sbjct: 373 GLFPGAASGGISPSVVSGPPPGAQAGYQSFGAQ----MESETVHLFIPAL-AVGAIIGKQ 427
Query: 69 GSIVRTFQNETGASIKI--ADILPDSEERIVVISARENSEMRHSPAQDAVMRVHSRIAEI 126
G ++ GASIKI AD + D+++R+V+IS ++ + A R+ ++ E
Sbjct: 428 GQHIKQLSRFAGASIKIAPADGI-DAKQRMVIISGPPEAQFK------AQGRIFGKLKEE 480
Query: 127 GF---EPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAPRCGSPHD 183
F + + A + V S G ++G+GG V+E++ T A + V P+DQ P +D
Sbjct: 481 NFFGPKEEVKLEAHIKVPSFAAGRVIGKGGKTVNELQNLTSAEV-VVPRDQTP---DEND 536
Query: 184 E-IVQVIGNYHSVQDALFHITSRLRETIFPMKR 215
+ +V++ G++++ Q A +++E I ++R
Sbjct: 537 QVVVKITGHFYASQLA----QRKIQEIISQVRR 565
Score = 42.0 bits (97), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 88/201 (43%), Gaps = 28/201 (13%)
Query: 27 RGYS-SGP---GHETVGGRNRMFYEEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGAS 82
RG++ GP G ++G R ++ + +V +LL VG++IGK G+ +R +T +
Sbjct: 170 RGFNPRGPPRQGSPSLGARPKL--QSDVPLRLLVPTQFVGAIIGKEGATIRNITKQTHSK 227
Query: 83 IKI--ADILPDSEERIVVISARENSEMRHSPAQDAVMRVHSRIAEIGFEPGQAVVARLLV 140
I I + +E+ I V S E S A +M + + A I + + + ++L
Sbjct: 228 IDIHRKENAGAAEKPITVHSTPEGC----SSACRNIMEIMQKEA-IDTKITEEIPLKILA 282
Query: 141 HSQQIGCLLGRGGHIVSEMRRATGASIRVFP---------------KDQAPRCGSPHDEI 185
H+ +G L+G+ G + ++ + T I + P K C +EI
Sbjct: 283 HNNFVGRLIGKEGRNLKKIEQDTDTKITISPLQDLTLYNPERTITVKGTLDACAKAEEEI 342
Query: 186 VQVIGNYHSVQDALFHITSRL 206
++ + + A H+ S L
Sbjct: 343 MKKVRESYENDVAAMHLQSNL 363
>gi|344270303|ref|XP_003406985.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 3
[Loxodonta africana]
Length = 492
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 83/153 (54%), Gaps = 15/153 (9%)
Query: 61 VGSLIGKGGSIVRTFQNETGASIKIADI-LPDSEERIVVISARENSEMRHSPAQDAVMRV 119
VG++IGK G ++ GASIKIA PD++ R+V+I+ ++ + A R+
Sbjct: 330 VGAIIGKQGQHIKQLSRFAGASIKIAPAEAPDAKVRMVIITGPPEAQFK------AQGRI 383
Query: 120 HSRIAEIGF-EPGQAVV--ARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAP 176
+ +I E F P + V A + V S G ++G+GG V+E++ + A + V P+DQ P
Sbjct: 384 YGKIKEENFVSPKEEVKLEAHIRVPSFAAGRVIGKGGKTVNELQNLSSAEV-VVPRDQTP 442
Query: 177 RCGSPHDE-IVQVIGNYHSVQDALFHITSRLRE 208
+D+ +V++ G++++ Q A I L +
Sbjct: 443 ---DENDQVVVKITGHFYACQVAQRKIQEILTQ 472
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 88/196 (44%), Gaps = 21/196 (10%)
Query: 52 FKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKI--ADILPDSEERIVVISARENSEMRH 109
+LL VG++IGK G+ +R +T + I + + +E+ I ++S E +
Sbjct: 111 LRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKSITILSTPEGT---- 166
Query: 110 SPAQDAVMRV-HSRIAEIGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIR 168
S A +++ + H +I F + + ++L H+ +G L+G+ G + ++ + T I
Sbjct: 167 SAACKSILEIMHKEAQDIKF--TEEIPLKILAHNNFVGRLIGKEGRNLKKIEQDTDTKIT 224
Query: 169 VFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRET----IFPMKR-----PGPN 219
+ P Q +P I V G+ + A I ++RE+ I M PG N
Sbjct: 225 ISPL-QELTLYNPERTIT-VKGSVETCAKAEEEIMKKIRESYENDIASMNLQAHLIPGLN 282
Query: 220 -NGHSYLPPFPEMPPP 234
N PP MPPP
Sbjct: 283 LNALGLFPPTSGMPPP 298
>gi|242058519|ref|XP_002458405.1| hypothetical protein SORBIDRAFT_03g032870 [Sorghum bicolor]
gi|241930380|gb|EES03525.1| hypothetical protein SORBIDRAFT_03g032870 [Sorghum bicolor]
Length = 343
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 79/163 (48%), Gaps = 19/163 (11%)
Query: 60 KVGSLIGKGGSIVRTFQNETGASIKI---ADILPDSEERIVVISARENSEMRHSPAQDAV 116
KVG LIGK G +R Q +GA I+I AD+ ++ R V++ + S A
Sbjct: 165 KVGVLIGKAGETIRNLQKSSGAWIQIAKHADVDSNALTRSVLLVGKPGS------VDKAE 218
Query: 117 MRVHSRIAEI----GFEPGQAVVAR--LLVHSQQIGCLLGRGGHIVSEMRRATGASIRVF 170
+ S IAE GF GQ+ + + V + +IG ++G+ G + +++ +GA I
Sbjct: 219 QLIESVIAEAEAARGFGSGQSGSEQFDMAVPNNKIGLIIGKRGETIKDLQLKSGARIEFI 278
Query: 171 PKDQAPRCG-SPHDEIVQVIGNYHSVQDALFHITSRLRETIFP 212
PK P G + IV+V GN ++ A I + +T FP
Sbjct: 279 PK--IPLEGVTSTGRIVRVTGNKQQIEVAKDLIKQAVNQT-FP 318
>gi|297810533|ref|XP_002873150.1| hypothetical protein ARALYDRAFT_487225 [Arabidopsis lyrata subsp.
lyrata]
gi|297318987|gb|EFH49409.1| hypothetical protein ARALYDRAFT_487225 [Arabidopsis lyrata subsp.
lyrata]
Length = 334
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 79/161 (49%), Gaps = 8/161 (4%)
Query: 52 FKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIA---DILPDSEERIVVISARENSEMR 108
+ L GS+IGKGGS + FQ ++GA I+++ + P + +RI++IS +
Sbjct: 37 IRFLVSNAAAGSVIGKGGSTITEFQAKSGARIQLSRNQEFFPGTTDRIIMISGSIKEVI- 95
Query: 109 HSPAQDAVMRVHSRI-AEIGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASI 167
+ + + ++HS + AE G E RL+V + G ++G+GG + + A I
Sbjct: 96 -NGLELILDKLHSELHAEDGNEVEPRRRIRLVVPNSSCGGIIGKGGATIKSFIEESKAGI 154
Query: 168 RVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRE 208
++ P D S D +V + G + A+ I ++L E
Sbjct: 155 KISPLDNTFYGLS--DRLVTLSGTFEEQMRAIDLILAKLTE 193
>gi|313229517|emb|CBY18332.1| unnamed protein product [Oikopleura dioica]
Length = 488
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 84/391 (21%), Positives = 144/391 (36%), Gaps = 65/391 (16%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMRH 109
V +LL ++VG+LIG+ GS + + E+G +KI D E RIV +S R
Sbjct: 23 VTIRLLFKGNQVGTLIGRKGSKIMQIREESGCEVKIKGNEKDIE-RIVSVSGSPAGVTRA 81
Query: 110 SPAQDAVMRVHSRIAEIGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRV 169
+ G V ++V + Q G ++G+GG + E+R TG +++
Sbjct: 82 IGKVGEFVEADLNDGLTGRTTKIPVTLHMIVPTGQCGSIIGKGGFRIKEIREKTGCNVK- 140
Query: 170 FPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKRPGPNNGHSYLPPFP 229
+ P + ++++ + G +Q + I + E K
Sbjct: 141 IANELLP---ASTEKLITLYGEPRVIQQCVGSICQVMIEEGQERKC-------------- 183
Query: 230 EMPPPPFRPRHNPASPGSY-PSPVGPFHSMDRGMG-----------PSQPFDHQAAFSHG 277
P +P SY PSPV M R P P+ H G
Sbjct: 184 -----------TPYTPASYGPSPVFGMEGMPRNASQYPPPPAGNAPPQYPYPHSG--HSG 230
Query: 278 MDPMVPPNSDRIPFPYGSERPGHGPTFDRPPSPRSWTPQGVGGGDPRGFDASS------- 330
P PP +PG+ P + P P G G+ ASS
Sbjct: 231 APPSAPPT-----------QPGYPPNWAPGHPPMPNPPAPAYGQVYPGYGASSYPNPSDP 279
Query: 331 GFTPRNRPVESGN---HAAILTSTTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVN 387
F R+ ++ IL+ +EV + + M V G S + +R +S ++ ++
Sbjct: 280 AFILRDTNLDHFKVKLATKILSEGVLEVHVDKTCMGAVIGRGGSRIGEVRMLSTHDIKIH 339
Query: 388 DPKPGATEGVVMVSGTSDQMRAAQSLIHAFI 418
+ +T + +SG + + A L+H +
Sbjct: 340 EVDGDSTFRRITISGDKNHIDKAVLLLHVCV 370
>gi|47220208|emb|CAF98973.1| unnamed protein product [Tetraodon nigroviridis]
Length = 345
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 62/119 (52%), Gaps = 12/119 (10%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMR- 108
+ +LL H +VGS+IGK G V+ + E+GA I I++ + ERIV I+ ++ +
Sbjct: 16 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE--GNCPERIVTITGPTDTIFKA 73
Query: 109 -----HSPAQDAVMRVHSRIAEIGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRA 162
+ +D + + + +A V RL+V + Q G L+G+GG + EMR A
Sbjct: 74 FAMIAYKFEEDIINSMSNSLA----TSKPPVTLRLVVPASQCGSLIGKGGSKIKEMREA 128
Score = 43.5 bits (101), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 42/74 (56%)
Query: 350 STTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATEGVVMVSGTSDQMRA 409
++T E+ IP + + G + ++ IRQ+SGA + + + G++E + ++GT +
Sbjct: 268 ASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANAMEGSSERQITITGTPANISL 327
Query: 410 AQSLIHAFILCGVT 423
AQ LI+A + VT
Sbjct: 328 AQYLINARLTSEVT 341
>gi|169617928|ref|XP_001802378.1| hypothetical protein SNOG_12147 [Phaeosphaeria nodorum SN15]
gi|111059439|gb|EAT80559.1| hypothetical protein SNOG_12147 [Phaeosphaeria nodorum SN15]
Length = 485
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 87/411 (21%), Positives = 163/411 (39%), Gaps = 58/411 (14%)
Query: 33 PGHETVGGRNR-MFYEEEVVFKLLCHL------DKVGSLIGKGGSIVRTFQNETGASIKI 85
P T G R + + ++V HL + ++IGKGG V + +GA +
Sbjct: 103 PIQSTSGANGRPLSHSQQVDETNWLHLRACIGTSEAATIIGKGGENVTQIRRLSGAKCTV 162
Query: 86 ADILPDSEERIVVISARENSEMRHSPAQDAVMRVHSR--IAEIGFEPGQAVVARLLVHSQ 143
+D + ERI+ +S + ++ S A ++R ++ + +A RLL+
Sbjct: 163 SDYSRGAVERILTVSGQVDAV---SKAFGLIVRTLNQEDLEAPSTSTSKAYPMRLLIPHI 219
Query: 144 QIGCLLGRGGHIVSEMRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHIT 203
IG ++G+ G + E++ A+ A + P G + + V+G +V A++++
Sbjct: 220 LIGSIIGKAGVRIREIQEASNAKLNAS-DTLLPNSG---ERSLVVLGVADAVHIAVYYVA 275
Query: 204 SRLRETIFPMKRPGPNNGHSYLPPFPEMPPPPFRPRHNPAS---PGSY------PSPVGP 254
L E + + GP + R A+ PG P P G
Sbjct: 276 QTLVEQLT-ERFGGPAASQ-------------YATRSGMAANVVPGGMSVQPYVPQPAGG 321
Query: 255 FHSMDRGMGPSQPFDHQAAFSHGMDPMVPPNSDRIP-------FPYGSERPGHGPTFDRP 307
+ +P A +G P + P + P PYG+ PG P
Sbjct: 322 QYQQPNNFRRQEPQRTPAHGGYGAAPHMQPGAPVHPSPYGQPQMPYGAGSPGRAHYGGPP 381
Query: 308 PSPRSWTPQGVGGGDPRGFDASSGFTPRNRPVESGNHAAILTSTTIEVVIPQLYMAHVYG 367
P + G P+G G P PV T ++ IP + + G
Sbjct: 382 QQPGPY-------GAPQGAPVPHGGPPNQPPVSMPGQ-----PLTQQIFIPNDMVGAIIG 429
Query: 368 ENNSNLSHIRQISGANVVVNDPKPGATEGVVMVSGTSDQMRAAQSLIHAFI 418
+ + ++ IRQ+SG+ + +N+P + E +V ++GT + + A ++++ +
Sbjct: 430 KGGAKINEIRQLSGSVIKINEPTDNSNERLVTITGTQECNQMALYMLYSRL 480
Score = 45.1 bits (105), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 46/80 (57%), Gaps = 7/80 (8%)
Query: 130 PGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVF-PKDQAPRCGSPHDEIVQV 188
PGQ + ++ + + +G ++G+GG ++E+R+ +G+ I++ P D + ++ +V +
Sbjct: 409 PGQPLTQQIFIPNDMVGAIIGKGGAKINEIRQLSGSVIKINEPTDNS------NERLVTI 462
Query: 189 IGNYHSVQDALFHITSRLRE 208
G Q AL+ + SRL E
Sbjct: 463 TGTQECNQMALYMLYSRLGE 482
Score = 40.8 bits (94), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 38/67 (56%), Gaps = 6/67 (8%)
Query: 59 DKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMRHSPAQDAVMR 118
D VG++IGKGG+ + + +G+ IKI + +S ER+V I+ + Q A+
Sbjct: 422 DMVGAIIGKGGAKINEIRQLSGSVIKINEPTDNSNERLVTITGTQECN------QMALYM 475
Query: 119 VHSRIAE 125
++SR+ E
Sbjct: 476 LYSRLGE 482
>gi|148229563|ref|NP_001079932.1| insulin-like growth factor 2 mRNA-binding protein 3-B [Xenopus
laevis]
gi|82227771|sp|O57526.1|IF23B_XENLA RecName: Full=Insulin-like growth factor 2 mRNA-binding protein
3-B; Short=IGF2 mRNA-binding protein 3-B; Short=IMP-3-B;
AltName: Full=69 kDa RNA-binding protein B; AltName:
Full=B3.65 protein B; AltName: Full=IGF-II mRNA-binding
protein 3-B; AltName: Full=KH domain-containing
transcription factor B3-B; AltName: Full=RNA-binding
protein Vera-B; AltName: Full=Trans-acting factor B3-B;
AltName: Full=VICKZ family member 3-B; AltName:
Full=VLE-binding protein B; AltName: Full=Vg1
RNA-binding protein B; Short=Vg1 RBP-B; AltName:
Full=Vg1 localization element binding protein B;
AltName: Full=VgLE-binding and ER association protein B
gi|2801766|gb|AAB97457.1| KH domain-containing transcription factor B3 [Xenopus laevis]
gi|3172447|gb|AAC18597.1| Vg1 RNA binding protein variant A [Xenopus laevis]
gi|35505483|gb|AAH57700.1| MGC68429 protein [Xenopus laevis]
Length = 593
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 81/151 (53%), Gaps = 15/151 (9%)
Query: 61 VGSLIGKGGSIVRTFQNETGASIKIADIL-PDSEERIVVISARENSEMRHSPAQDAVMRV 119
VG++IGK G ++ GASIKIA PD++ R+V+I+ ++ + A R+
Sbjct: 429 VGAIIGKQGQHIKQLSRFAGASIKIAPAEGPDAKLRMVIITGPPEAQFK------AQGRI 482
Query: 120 HSRIAEIGF---EPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAP 176
+ ++ E F + + A + V S G ++G+GG V+E++ T A + V P+DQ P
Sbjct: 483 YGKLKEENFFGPKEEVKLEAHIKVPSYAAGRVIGKGGKTVNELQNLTSAEV-VVPRDQTP 541
Query: 177 RCGSPHDE-IVQVIGNYHSVQDALFHITSRL 206
+D+ +V++ G++++ Q A I L
Sbjct: 542 ---DENDQVVVKITGHFYASQLAQRKIQEIL 569
Score = 38.5 bits (88), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 37/165 (22%), Positives = 77/165 (46%), Gaps = 9/165 (5%)
Query: 47 EEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKI--ADILPDSEERIVVISAREN 104
+ EV ++L VG++IGK G+ +R +T + I I + +E+ I + S E
Sbjct: 202 QSEVPLRMLVPTQFVGAIIGKEGATIRNITKQTQSKIDIHRKENAGAAEKPITIHSTPEG 261
Query: 105 SEMRHSPAQDAVMRVHSRIAEIGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATG 164
S A +M + + A+ + + + ++L H+ +G L+G+ G + ++ + T
Sbjct: 262 C----SAACKIIMEIMQKEAQ-DTKFTEEIPLKILAHNNFVGRLIGKEGRNLKKIEQDTD 316
Query: 165 ASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRET 209
I + P Q +P + + V G+ + A + ++RE+
Sbjct: 317 TKITISPL-QDLTLYNP-ERTITVKGSIETCAKAEEEVMKKIRES 359
>gi|30680512|ref|NP_850764.1| binding to TOMV RNA 1L (long form) protein [Arabidopsis thaliana]
gi|332003360|gb|AED90743.1| binding to TOMV RNA 1L (long form) protein [Arabidopsis thaliana]
Length = 334
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 79/161 (49%), Gaps = 8/161 (4%)
Query: 52 FKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIA---DILPDSEERIVVISARENSEMR 108
+ L GS+IGKGGS + FQ ++GA I+++ + P + +RI++IS +
Sbjct: 37 IRFLVSNAAAGSVIGKGGSTITEFQAKSGARIQLSRNQEFFPGTTDRIIMISGSIKEVV- 95
Query: 109 HSPAQDAVMRVHSRI-AEIGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASI 167
+ + + ++HS + AE G E RL+V + G ++G+GG + + A I
Sbjct: 96 -NGLELILDKLHSELHAEDGNEVEPRRRIRLVVPNSSCGGIIGKGGATIKSFIEESKAGI 154
Query: 168 RVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRE 208
++ P D S D +V + G + A+ I ++L E
Sbjct: 155 KISPLDNTFYGLS--DRLVTLSGTFEEQMRAIDLILAKLTE 193
>gi|224116384|ref|XP_002317284.1| predicted protein [Populus trichocarpa]
gi|222860349|gb|EEE97896.1| predicted protein [Populus trichocarpa]
Length = 85
Score = 54.7 bits (130), Expect = 8e-05, Method: Composition-based stats.
Identities = 25/69 (36%), Positives = 47/69 (68%)
Query: 351 TTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATEGVVMVSGTSDQMRAA 410
+T+E+++P + V G+ +N+++IR+ISGA + ++D + + +SGT +Q RAA
Sbjct: 15 STLEMLVPANAVGKVMGKGGANIANIRKISGAMIEISDANSARGDRIARISGTLEQKRAA 74
Query: 411 QSLIHAFIL 419
++LI AFI+
Sbjct: 75 ENLIQAFIM 83
>gi|302852888|ref|XP_002957962.1| subunit of circadian RNA-binding protein [Volvox carteri f.
nagariensis]
gi|297592090|gb|ADI46875.1| CRB1f [Volvox carteri f. nagariensis]
gi|300256728|gb|EFJ40988.1| subunit of circadian RNA-binding protein [Volvox carteri f.
nagariensis]
Length = 494
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 64/133 (48%), Gaps = 22/133 (16%)
Query: 49 EVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMR 108
EV + C VG +IG+GG +RT Q +GA I + P+ R ++I+
Sbjct: 203 EVQGTVECPPGIVGRIIGRGGETIRTLQQASGAHILVNQDFPEGVPRQIIITG------- 255
Query: 109 HSPAQDAVMRVHSRIAEI----GFEPGQAVVARLLVHSQQ--------IGCLLGRGGHIV 156
AQDAV R S ++E+ QA++ R V S + +G ++G+GG +
Sbjct: 256 ---AQDAVQRATSMVSELINGSNHTNTQAIIQRFGVGSTEVVECPKAMVGRIIGKGGETI 312
Query: 157 SEMRRATGASIRV 169
++++ SI++
Sbjct: 313 KDLQKRFNVSIQI 325
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 73/160 (45%), Gaps = 20/160 (12%)
Query: 54 LLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMRHSPAQ 113
++C DKVG +IG+ G+ +R + T I++ P ++ VV+S R + R A+
Sbjct: 129 IMCPPDKVGRIIGRAGATIRDLEASTSTRIQVDHKAPG--DKPVVVSGRRDDVDR---AK 183
Query: 114 DAVMRVHSRIAEIGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRV---F 170
AV + S E V + +G ++GRGG + +++A+GA I V F
Sbjct: 184 RAVHDLISGATETTSPSTNEVQGTVECPPGIVGRIIGRGGETIRTLQQASGAHILVNQDF 243
Query: 171 PKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETI 210
P+ G P I+ QDA+ TS + E I
Sbjct: 244 PE------GVPRQIIIT------GAQDAVQRATSMVSELI 271
>gi|449492580|ref|XP_002192437.2| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 3
[Taeniopygia guttata]
Length = 584
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 81/151 (53%), Gaps = 15/151 (9%)
Query: 61 VGSLIGKGGSIVRTFQNETGASIKIADIL-PDSEERIVVISARENSEMRHSPAQDAVMRV 119
VG++IGK G ++ GASIKIA PD++ R+V+I+ ++ + A R+
Sbjct: 421 VGAIIGKQGQHIKQLSRFAGASIKIAPAEGPDAKLRMVIITGPPEAQFK------AQGRI 474
Query: 120 HSRIAEIGF---EPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAP 176
+ ++ E F + + A + V S G ++G+GG V+E++ T A + V P+DQ P
Sbjct: 475 YGKLKEENFFGPKEEVKLEAHIKVPSYAAGRVIGKGGKTVNELQNLTSAEV-VVPRDQTP 533
Query: 177 RCGSPHDE-IVQVIGNYHSVQDALFHITSRL 206
+D+ +V++ G++++ Q A I L
Sbjct: 534 ---DENDQVVVKITGHFYACQLAQRKIQEIL 561
>gi|189237154|ref|XP_973939.2| PREDICTED: similar to igf2 mRNA binding protein, putative
[Tribolium castaneum]
Length = 1116
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 90/189 (47%), Gaps = 24/189 (12%)
Query: 23 GYHSRGYSSG----PGHETVGGRNRMFYEEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNE 78
GY SRG +G PG G +E + + + + VG++IG GS +R
Sbjct: 320 GYGSRGLYTGQAPYPGMYPAGAAQGGGDSQETTYLYIPN-NAVGAIIGTKGSHIRNIIRF 378
Query: 79 TGASIKIADI------LPDSEERIVVISARENSEMRHSPAQDAVMRVHSRIAEIGFEPGQ 132
+GAS+KIA I +E R+ ++ + E A + ++ E GF G
Sbjct: 379 SGASVKIAPIDETKPQETQNERRVTIVGSPE-------AQWKAQYLIFEKMREEGFVAGS 431
Query: 133 A---VVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAPRCGSPHDEIVQVI 189
+ ++V S Q+G ++G+GG V E++R TG+ I++ + +P+ + V +I
Sbjct: 432 DDVRLTVEIMVPSSQVGRIIGKGGQNVRELQRVTGSVIKLPEQGASPQ---EDETTVHII 488
Query: 190 GNYHSVQDA 198
G + SVQ A
Sbjct: 489 GPFFSVQSA 497
Score = 44.7 bits (104), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 47/216 (21%), Positives = 88/216 (40%), Gaps = 57/216 (26%)
Query: 46 YEEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIA---DILPDSEERIVVIS-- 100
Y E+ K+L H + +G +IGKGG+ ++ ET I ++ DI + ERI+ +
Sbjct: 213 YYYEICLKILAHNNLIGRIIGKGGNTIKRIMQETDTKITVSSINDINSFNLERIITVKGA 272
Query: 101 --------ARENSEMRHSPAQD-----------------AVMRVH-----SRIAEIGFEP 130
A+ ++++R S D A+M SR G
Sbjct: 273 IDNMSRAEAQISAKLRQSYENDLQAMAPQTMMFPGLHPMAMMATAGIGYGSR----GLYT 328
Query: 131 GQA------------------VVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPK 172
GQA L + + +G ++G G + + R +GAS+++ P
Sbjct: 329 GQAPYPGMYPAGAAQGGGDSQETTYLYIPNNAVGAIIGTKGSHIRNIIRFSGASVKIAPI 388
Query: 173 DQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRE 208
D+ + ++ V ++G+ + A + I ++RE
Sbjct: 389 DETKPQETQNERRVTIVGSPEAQWKAQYLIFEKMRE 424
Score = 42.0 bits (97), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 36/162 (22%), Positives = 73/162 (45%), Gaps = 7/162 (4%)
Query: 52 FKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKI--ADILPDSEERIVVISARENSEMRH 109
++L D VG++IG+ GS +R +T A + + D + E+ I + EN
Sbjct: 132 LRILVQSDMVGAIIGRQGSTIRQITQQTRARVDVHRKDNVGSLEKAITIYGNPENCTNAC 191
Query: 110 SPAQDAVMRVHSRIAEIGFEPG--QAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASI 167
+ VM+ + G+ + ++L H+ IG ++G+GG+ + + + T I
Sbjct: 192 KRILE-VMQQEANNTNKGYAKKYYYEICLKILAHNNLIGRIIGKGGNTIKRIMQETDTKI 250
Query: 168 RVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRET 209
V + + I+ V G ++ A I+++LR++
Sbjct: 251 TVSSINDINSFN--LERIITVKGAIDNMSRAEAQISAKLRQS 290
>gi|70989551|ref|XP_749625.1| KH domain RNA binding protein [Aspergillus fumigatus Af293]
gi|66847256|gb|EAL87587.1| KH domain RNA binding protein [Aspergillus fumigatus Af293]
Length = 464
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 88/402 (21%), Positives = 159/402 (39%), Gaps = 87/402 (21%)
Query: 52 FKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMRHSP 111
+ + + ++IGKGG V + +GA ++D + ERI+ +S
Sbjct: 114 IRAVISSQEAATVIGKGGENVSQIRRLSGAKCTVSDYSRGAVERILTVSG---------- 163
Query: 112 AQDAVMRVHSRIAE-IGFEP--------GQAVVARLLVHSQQIGCLLGRGGHIVSEMRRA 162
QDAV + I + EP + RLL+ IG ++G+GG + E++ A
Sbjct: 164 PQDAVAKAFGLIIRTLNNEPLDAPSTAQSKTYPLRLLIPHLLIGSIIGKGGSRIREIQEA 223
Query: 163 TGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKRPGPNNGH 222
+GA R+ D S + + ++G SV A +++ L E + +R G
Sbjct: 224 SGA--RLNASDSCLPLSS--ERSLVILGVADSVHIATYYVAVTLVEQL--TERFGGPAAS 277
Query: 223 SY--------------LPPFPEMPPPP---------FRPRH---NPASPGSYPSPVGPFH 256
+Y + P +P P F+ H N A+ G+Y P H
Sbjct: 278 AYATRSGGPAGAVPGGMQVVPYVPQPAGGQYGHPEHFKRHHHHPNRAAAGAYGVPY--LH 335
Query: 257 SMDRGMGPSQPFDHQAAFSHGMDPMVPPNSDRIPFPYGSERPGHGPTFDRPPSPRSWTPQ 316
+QP H A H P+ P PYG+ +P P +P
Sbjct: 336 GQPAPAPVAQPALHYGAAPHAPYAGAGPHQ---PAPYGAPQPAQARGAPTPATP------ 386
Query: 317 GVGGGDPRGFDASSGFTPRNRPVESGNHAAILTSTTIEVVIPQLYMAHVYGENNSNLSHI 376
VGG P +P+ T ++ IP + + G+ + ++ I
Sbjct: 387 -VGGVMP------------GQPL------------TQQIYIPNDMVGAIIGKGGAKINEI 421
Query: 377 RQISGANVVVNDPKPGATEGVVMVSGTSDQMRAAQSLIHAFI 418
R +SG+ + +N+P+ + E +V ++GT + + A ++++ +
Sbjct: 422 RHLSGSVIKINEPQENSNERLVTITGTQECNQMALYMLYSRL 463
>gi|321468687|gb|EFX79671.1| hypothetical protein DAPPUDRAFT_225024 [Daphnia pulex]
Length = 573
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 80/178 (44%), Gaps = 31/178 (17%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIA---DILPDSEERIVVISARENSE 106
+ K+L G++IGKGG + Q E A IK++ D P + ER+ +I S
Sbjct: 56 IYLKVLVPSVAAGAIIGKGGETIAQVQKEVNARIKMSKANDFYPGTTERVCLIKGTTESV 115
Query: 107 M----------RHSPAQDA--VMRVHSRIAEIGFEPGQAVVARLLVHSQQIGCLLGRGGH 154
M R P +A M S+ E + V ++LV + G ++G+GG
Sbjct: 116 MSMLTFICEKIRDKPDPNAKPAMDFDSKTPA---ERDKQV--KILVPNSTAGMIIGKGGS 170
Query: 155 IVSEMRRATGASIRVF--PKDQA--PRCGSPHDEIVQVIGNYHSVQDALFHITSRLRE 208
+ +++ +GA I++ KDQA RC + VIG+ + A I S++ E
Sbjct: 171 FIKQIKEESGAYIQISQKAKDQALQERC-------ITVIGDSDCNRKACCMILSKIAE 221
>gi|62858479|ref|NP_001017139.1| insulin-like growth factor 2 mRNA binding protein 3 [Xenopus
(Silurana) tropicalis]
gi|89272857|emb|CAJ82142.1| IGF-II mRNA-binding protein 3 (imp-3) [Xenopus (Silurana)
tropicalis]
Length = 594
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 81/151 (53%), Gaps = 15/151 (9%)
Query: 61 VGSLIGKGGSIVRTFQNETGASIKIADIL-PDSEERIVVISARENSEMRHSPAQDAVMRV 119
VG++IGK G ++ GASIKIA PD++ R+V+I+ ++ + A R+
Sbjct: 430 VGAIIGKQGQHIKQLSRFAGASIKIAPAEGPDAKLRMVIITGPPEAQFK------AQGRI 483
Query: 120 HSRIAEIGF---EPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAP 176
+ ++ E F + + A + V S G ++G+GG V+E++ T A + V P+DQ P
Sbjct: 484 YGKLKEENFFGPKEEVKLEAHIKVPSYAAGRVIGKGGKTVNELQNLTSAEV-VVPRDQTP 542
Query: 177 RCGSPHDE-IVQVIGNYHSVQDALFHITSRL 206
+D+ +V++ G++++ Q A I L
Sbjct: 543 ---DENDQVVVKITGHFYASQLAQRKIQEIL 570
Score = 38.9 bits (89), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 38/165 (23%), Positives = 77/165 (46%), Gaps = 9/165 (5%)
Query: 47 EEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKI--ADILPDSEERIVVISAREN 104
+ EV ++L VG++IGK G+ +R +T + I I + +E+ I + S E
Sbjct: 203 QSEVPLRMLVPTQFVGAIIGKEGATIRNITKQTQSKIDIHRKENAGAAEKPITIHSTPEG 262
Query: 105 SEMRHSPAQDAVMRVHSRIAEIGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATG 164
S A +M + + A+ + + + ++L H+ +G L+G+ G + ++ + T
Sbjct: 263 C----SAACKIIMEIMQKEAQ-DTKFTEEIPLKILAHNNFVGRLIGKEGRNLKKIEQDTD 317
Query: 165 ASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRET 209
I + P Q +P + + V G+ + A I ++RE+
Sbjct: 318 TKITISPL-QDLTLYNP-ERTITVKGSIEACAKAEEEIMKKIRES 360
>gi|57530702|ref|NP_001006359.1| insulin-like growth factor 2 mRNA-binding protein 3 [Gallus gallus]
gi|82082638|sp|Q5ZLP8.1|IF2B3_CHICK RecName: Full=Insulin-like growth factor 2 mRNA-binding protein 3;
Short=IGF2 mRNA-binding protein 3; Short=IMP-3; AltName:
Full=IGF-II mRNA-binding protein 3; AltName: Full=VICKZ
family member 3
gi|53128909|emb|CAG31345.1| hypothetical protein RCJMB04_5e15 [Gallus gallus]
Length = 584
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 81/151 (53%), Gaps = 15/151 (9%)
Query: 61 VGSLIGKGGSIVRTFQNETGASIKIADIL-PDSEERIVVISARENSEMRHSPAQDAVMRV 119
VG++IGK G ++ GASIKIA PD++ R+V+I+ ++ + A R+
Sbjct: 421 VGAIIGKQGQHIKQLSRFAGASIKIAPAEGPDAKLRMVIITGPPEAQFK------AQGRI 474
Query: 120 HSRIAEIGF---EPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAP 176
+ ++ E F + + A + V S G ++G+GG V+E++ T A + V P+DQ P
Sbjct: 475 YGKLKEENFFGPKEEVKLEAHIKVPSYAAGRVIGKGGKTVNELQNLTSAEV-VVPRDQTP 533
Query: 177 RCGSPHDE-IVQVIGNYHSVQDALFHITSRL 206
+D+ +V++ G++++ Q A I L
Sbjct: 534 ---DENDQVVVKITGHFYACQLAQRKIQEIL 561
>gi|85838458|gb|ABC86135.1| nova [Paracentrotus lividus]
Length = 553
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 34/176 (19%), Positives = 83/176 (47%), Gaps = 23/176 (13%)
Query: 47 EEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIA---DILPDSEERIVVISARE 103
+ + + K+L GS+IGKGG + Q +TG ++K++ D P ++ER+ +++
Sbjct: 71 DNKYILKMLIPSTAAGSIIGKGGQTIAQLQRDTGTNVKLSKANDFYPGTQERVALLTGPV 130
Query: 104 NSEMRHSPAQDAVMRVHSRIAE---IGFEPGQAVVA--------RLLVHSQQIGCLLGRG 152
S + + V +I E +G + G + +++V + G ++G+G
Sbjct: 131 ES------LNNVAVFVLEKIKESPQLGVKAGAETITSPERARQVKIVVPNSTAGLIIGKG 184
Query: 153 GHIVSEMRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRE 208
G ++ + +G+ +++ K + ++ + G + + A+ I ++++E
Sbjct: 185 GAMIKSIMEQSGSRVQISQKSDGITL---SERVITISGEPENNRKAMSFIVNKIQE 237
>gi|225543383|ref|NP_076159.3| insulin-like growth factor 2 mRNA-binding protein 3 [Mus musculus]
gi|81916748|sp|Q9CPN8.1|IF2B3_MOUSE RecName: Full=Insulin-like growth factor 2 mRNA-binding protein 3;
Short=IGF2 mRNA-binding protein 3; Short=IMP-3;
Short=mIMP-3; AltName: Full=IGF-II mRNA-binding protein
3; AltName: Full=VICKZ family member 3
gi|11933384|dbj|BAB19755.1| igf2 mRNA-binding protein 3 [Mus musculus]
gi|12847973|dbj|BAB27779.1| unnamed protein product [Mus musculus]
gi|28175449|gb|AAH45138.1| Insulin-like growth factor 2 mRNA binding protein 3 [Mus musculus]
gi|29145081|gb|AAH49082.1| Insulin-like growth factor 2 mRNA binding protein 3 [Mus musculus]
gi|148666183|gb|EDK98599.1| insulin-like growth factor 2 mRNA binding protein 3, isoform CRA_b
[Mus musculus]
Length = 579
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 83/154 (53%), Gaps = 15/154 (9%)
Query: 61 VGSLIGKGGSIVRTFQNETGASIKIADI-LPDSEERIVVISARENSEMRHSPAQDAVMRV 119
VG++IGK G ++ GASIKIA PD++ R+V+I+ ++ + A R+
Sbjct: 417 VGAIIGKQGQHIKQLSRFAGASIKIAPAEAPDAKVRMVIITGPPEAQFK------AQGRI 470
Query: 120 HSRIAEIGF-EPGQAVV--ARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAP 176
+ +I E F P + V A + V S G ++G+GG V+E++ + A + V P+DQ P
Sbjct: 471 YGKIKEENFVSPKEEVKLEAHIRVPSFAAGRVIGKGGKTVNELQSLSSAEV-VVPRDQTP 529
Query: 177 RCGSPHDE-IVQVIGNYHSVQDALFHITSRLRET 209
+D+ +V++ G++++ Q A I L +
Sbjct: 530 ---DENDQVVVKITGHFYACQVAQRKIQEILTQV 560
Score = 43.9 bits (102), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 37/161 (22%), Positives = 77/161 (47%), Gaps = 11/161 (6%)
Query: 52 FKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKI--ADILPDSEERIVVISARENSEMRH 109
+LL VG++IGK G+ +R +T + I + + +E+ I ++S E +
Sbjct: 198 LRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHRKENTGAAEKSITILSTPEGT---- 253
Query: 110 SPAQDAVMRV-HSRIAEIGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIR 168
S A +++ + H +I F + + ++L H+ +G L+G+ G + ++ + T I
Sbjct: 254 SAACKSILEIMHKEAQDIKF--TEEIPLKILAHNNFVGRLIGKEGRNLKKIEQDTDTKIT 311
Query: 169 VFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRET 209
+ P Q +P + + V G+ + A I ++RE+
Sbjct: 312 ISPL-QELTLYNP-ERTITVKGSVETCAKAEEEIMKKIRES 350
>gi|26353480|dbj|BAC40370.1| unnamed protein product [Mus musculus]
Length = 579
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 83/154 (53%), Gaps = 15/154 (9%)
Query: 61 VGSLIGKGGSIVRTFQNETGASIKIADI-LPDSEERIVVISARENSEMRHSPAQDAVMRV 119
VG++IGK G ++ GASIKIA PD++ R+V+I+ ++ + A R+
Sbjct: 417 VGAIIGKQGQHIKQLSRFAGASIKIAPAEAPDAKVRMVIITGPPEAQFK------AQGRI 470
Query: 120 HSRIAEIGF-EPGQAVV--ARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAP 176
+ +I E F P + V A + V S G ++G+GG V+E++ + A + V P+DQ P
Sbjct: 471 YGKIKEENFVSPKEEVKLEAHIRVPSFAAGRVIGKGGKTVNELQSLSSAEV-VVPRDQTP 529
Query: 177 RCGSPHDE-IVQVIGNYHSVQDALFHITSRLRET 209
+D+ +V++ G++++ Q A I L +
Sbjct: 530 ---DENDQVVVKITGHFYACQVAQRKIQEILTQV 560
Score = 43.9 bits (102), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 37/161 (22%), Positives = 77/161 (47%), Gaps = 11/161 (6%)
Query: 52 FKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKI--ADILPDSEERIVVISARENSEMRH 109
+LL VG++IGK G+ +R +T + I + + +E+ I ++S E +
Sbjct: 198 LRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHRKENTGAAEKSITILSTPEGT---- 253
Query: 110 SPAQDAVMRV-HSRIAEIGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIR 168
S A +++ + H +I F + + ++L H+ +G L+G+ G + ++ + T I
Sbjct: 254 SAACKSILEIMHKEAQDIKF--TEEIPLKILAHNNFVGRLIGKEGRNLKKIEQDTDTKIT 311
Query: 169 VFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRET 209
+ P Q +P + + V G+ + A I ++RE+
Sbjct: 312 ISPL-QELTLYNP-ERTITVKGSVETCAKAEEEIMKKIRES 350
>gi|299471031|emb|CBN78891.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 737
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 73/161 (45%), Gaps = 14/161 (8%)
Query: 52 FKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIA---DILPDSEERIVVISARENSEMR 108
KLL G+LIGKGG+ + ++E A IK+ P + ER+V++ S
Sbjct: 69 LKLLVSNSMAGTLIGKGGTRICEIKDECLADIKVTPNGRFYPGTHERVVLVVGEPGSVQM 128
Query: 109 HSPAQDAVMRVHSRIAEIGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATG-ASI 167
A D ++ A+ + + R+L+ G ++G G + ++R+ G ASI
Sbjct: 129 ---ACDRIVTTIYTAADTSLD----ITQRVLIPDAASGLIIGHDGVRLGDLRQQAGVASI 181
Query: 168 RVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRE 208
+V P+D C + +V + G SV L I R+ E
Sbjct: 182 QVSPRDM---CTVAGERVVTLQGPMSSVIHGLTLIVDRMME 219
>gi|119480179|ref|XP_001260118.1| KH domain RNA binding protein [Neosartorya fischeri NRRL 181]
gi|119408272|gb|EAW18221.1| KH domain RNA binding protein [Neosartorya fischeri NRRL 181]
Length = 464
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 89/402 (22%), Positives = 159/402 (39%), Gaps = 87/402 (21%)
Query: 52 FKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMRHSP 111
+ + + ++IGKGG V + +GA ++D + ERI+ +S
Sbjct: 114 IRAVISSQEAATVIGKGGENVSQIRRLSGAKCTVSDYSRGAVERILTVSG---------- 163
Query: 112 AQDAVMRVHSRIAE-IGFEPGQAVVA--------RLLVHSQQIGCLLGRGGHIVSEMRRA 162
QDAV + I + EP A RLL+ IG ++G+GG + E++ A
Sbjct: 164 PQDAVAKAFGLIIRTLNNEPLDAPSTAQSKTYPLRLLIPHLLIGSIIGKGGSRIREIQEA 223
Query: 163 TGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKRPGPNNGH 222
+GA R+ D S + + ++G SV A +++ L E + +R G
Sbjct: 224 SGA--RLNASDSCLPLSS--ERSLVILGVADSVHIATYYVAVTLVEQL--TERFGGPAAS 277
Query: 223 SY--------------LPPFPEMPPPP---------FRPRH---NPASPGSYPSPVGPFH 256
+Y + P +P P F+ H N A+ G+Y P H
Sbjct: 278 AYATRSGGPAGAVPGGMQVVPYVPQPAGGQYGHPEHFKRHHPHPNRAAAGAYGVPY--LH 335
Query: 257 SMDRGMGPSQPFDHQAAFSHGMDPMVPPNSDRIPFPYGSERPGHGPTFDRPPSPRSWTPQ 316
+QP H A H P+ P PYG+ +P P +P
Sbjct: 336 GQPAPAPVAQPALHYGAAPHAPYAGAGPHQ---PAPYGAPQPAQARGAPTPATP------ 386
Query: 317 GVGGGDPRGFDASSGFTPRNRPVESGNHAAILTSTTIEVVIPQLYMAHVYGENNSNLSHI 376
VGG P +P+ T ++ IP + + G+ + ++ I
Sbjct: 387 -VGGVMP------------GQPL------------TQQIYIPNDMVGAIIGKGGAKINEI 421
Query: 377 RQISGANVVVNDPKPGATEGVVMVSGTSDQMRAAQSLIHAFI 418
R +SG+ + +N+P+ + E +V ++GT + + A ++++ +
Sbjct: 422 RHLSGSVIKINEPQENSNERLVTITGTQECNQMALYMLYSRL 463
>gi|326921878|ref|XP_003207181.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein
3-like, partial [Meleagris gallopavo]
Length = 503
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 81/151 (53%), Gaps = 15/151 (9%)
Query: 61 VGSLIGKGGSIVRTFQNETGASIKIADIL-PDSEERIVVISARENSEMRHSPAQDAVMRV 119
VG++IGK G ++ GASIKIA PD++ R+V+I+ ++ + A R+
Sbjct: 340 VGAIIGKQGQHIKQLSRFAGASIKIAPAEGPDAKLRMVIITGPPEAQFK------AQGRI 393
Query: 120 HSRIAEIGF---EPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAP 176
+ ++ E F + + A + V S G ++G+GG V+E++ T A + V P+DQ P
Sbjct: 394 YGKLKEENFFGPKEEVKLEAHIKVPSYAAGRVIGKGGKTVNELQNLTSAEV-VVPRDQTP 452
Query: 177 RCGSPHDE-IVQVIGNYHSVQDALFHITSRL 206
+D+ +V++ G++++ Q A I L
Sbjct: 453 ---DENDQVVVKITGHFYACQLAQRKIQEIL 480
>gi|357507883|ref|XP_003624230.1| Poly(rC)-binding protein [Medicago truncatula]
gi|355499245|gb|AES80448.1| Poly(rC)-binding protein [Medicago truncatula]
gi|388513455|gb|AFK44789.1| unknown [Medicago truncatula]
Length = 193
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 53/79 (67%), Gaps = 1/79 (1%)
Query: 48 EEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEM 107
++V+F+++ ++G +IGK G ++ + T A+IKIAD + EER+++IS+++N EM
Sbjct: 98 QDVIFRIVVPSKQIGKVIGKEGCRIQKIREMTRANIKIADAIARHEERVIIISSKDNDEM 157
Query: 108 RHSPAQDAVMRVHSRIAEI 126
+ A+ A+ ++ + I +I
Sbjct: 158 V-TDAEKALEQIANLILKI 175
>gi|159129031|gb|EDP54145.1| KH domain RNA binding protein [Aspergillus fumigatus A1163]
Length = 464
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 89/402 (22%), Positives = 159/402 (39%), Gaps = 87/402 (21%)
Query: 52 FKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMRHSP 111
+ + + ++IGKGG V + +GA ++D + ERI+ +S
Sbjct: 114 IRAVISSQEAATVIGKGGENVSQIRRLSGAKCTVSDYSRGAVERILTVSG---------- 163
Query: 112 AQDAVMRVHSRIAE-IGFEPGQAVVA--------RLLVHSQQIGCLLGRGGHIVSEMRRA 162
QDAV + I + EP A RLL+ IG ++G+GG + E++ A
Sbjct: 164 PQDAVAKAFGLIIRTLNNEPLDAPSTAQSKTYPLRLLIPHLLIGSIIGKGGSRIREIQEA 223
Query: 163 TGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKRPGPNNGH 222
+GA R+ D S + + ++G SV A +++ L E + +R G
Sbjct: 224 SGA--RLNASDSCLPLSS--ERSLVILGVADSVHIATYYVAVTLVEQL--TERFGGPAAS 277
Query: 223 SY--------------LPPFPEMPPPP---------FRPRH---NPASPGSYPSPVGPFH 256
+Y + P +P P F+ H N A+ G+Y P H
Sbjct: 278 AYATRSGGPAGAVPGGMQVVPYVPQPAGGQYGHPEHFKRHHPHPNRAAAGAYGVPY--LH 335
Query: 257 SMDRGMGPSQPFDHQAAFSHGMDPMVPPNSDRIPFPYGSERPGHGPTFDRPPSPRSWTPQ 316
+QP H A H P+ P PYG+ +P P +P
Sbjct: 336 GQPAPAPVAQPALHYGAAPHAPYAGAGPHQ---PAPYGAPQPAQARGAPTPATP------ 386
Query: 317 GVGGGDPRGFDASSGFTPRNRPVESGNHAAILTSTTIEVVIPQLYMAHVYGENNSNLSHI 376
VGG P +P+ T ++ IP + + G+ + ++ I
Sbjct: 387 -VGGVMP------------GQPL------------TQQIYIPNDMVGAIIGKGGAKINEI 421
Query: 377 RQISGANVVVNDPKPGATEGVVMVSGTSDQMRAAQSLIHAFI 418
R +SG+ + +N+P+ + E +V ++GT + + A ++++ +
Sbjct: 422 RHLSGSVIKINEPQENSNERLVTITGTQECNQMALYMLYSRL 463
>gi|426199945|gb|EKV49869.1| hypothetical protein AGABI2DRAFT_63586 [Agaricus bisporus var.
bisporus H97]
Length = 365
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 97/206 (47%), Gaps = 23/206 (11%)
Query: 52 FKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMRHSP 111
+ L +IGKGGS V + ++GA + +++ +P + ERI+ +S ++ +
Sbjct: 66 MRCLIVTQDASIIIGKGGSHVNEIREKSGARVMVSESIPGNPERILNVSGPLDAVSKAFG 125
Query: 112 AQDAVMRVHSRIAEIGFEPG-QAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVF 170
V R++ ++ PG +AV + ++ + ++G ++G+GG + E++ A+GA +
Sbjct: 126 L--IVRRINDEPFDVPSVPGSRAVTIKFMIPNSRMGSVIGKGGSKIKEIQDASGAKLNA- 182
Query: 171 PKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPM--------------KRP 216
+ GS + ++ V G ++ A ++I + L E M +RP
Sbjct: 183 --SEGMLPGST-ERVLSVAGVADAIHIATYYIGTILIEAQERMPSTSNSTYRPSSQPRRP 239
Query: 217 GPNNGHSYLPPFPEMPPPPFRPRHNP 242
G SY+P + P+ P HNP
Sbjct: 240 TQGGGSSYVPGYSHH--APYGPPHNP 263
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 93/203 (45%), Gaps = 45/203 (22%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIAD-ILPDSEERI------------ 96
V K + ++GS+IGKGGS ++ Q+ +GA + ++ +LP S ER+
Sbjct: 147 VTIKFMIPNSRMGSVIGKGGSKIKEIQDASGAKLNASEGMLPGSTERVLSVAGVADAIHI 206
Query: 97 -------VVISARE------NSEMRHS-----PAQ---DAVMRVHSRIAEIG---FEPGQ 132
++I A+E NS R S P Q + + +S A G P Q
Sbjct: 207 ATYYIGTILIEAQERMPSTSNSTYRPSSQPRRPTQGGGSSYVPGYSHHAPYGPPHNPPQQ 266
Query: 133 AVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFP-------KDQAPRCGSPHDEI 185
++ + + +GC++G+GG ++E+R + + I++ + AP GS + +
Sbjct: 267 LQTQQIYIPNDLVGCIIGKGGSKINEIRHMSASQIKIMEPGATGLGPNGAP-GGSEGERL 325
Query: 186 VQVIGNYHSVQDALFHITSRLRE 208
V + G ++Q A+ + RL +
Sbjct: 326 VVITGQPANIQMAVQLLYHRLEQ 348
Score = 38.5 bits (88), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Query: 350 STTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPK-PGATEGVVMVSGTSDQMR 408
+ TI+ +IP M V G+ S + I+ SGA + ++ PG+TE V+ V+G +D +
Sbjct: 146 AVTIKFMIPNSRMGSVIGKGGSKIKEIQDASGAKLNASEGMLPGSTERVLSVAGVADAIH 205
Query: 409 AAQSLIHAFIL 419
A I ++
Sbjct: 206 IATYYIGTILI 216
>gi|409082121|gb|EKM82479.1| hypothetical protein AGABI1DRAFT_33710 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 365
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 97/206 (47%), Gaps = 23/206 (11%)
Query: 52 FKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMRHSP 111
+ L +IGKGGS V + ++GA + +++ +P + ERI+ +S ++ +
Sbjct: 66 MRCLIVTQDASIIIGKGGSHVNEIREKSGARVMVSESIPGNPERILNVSGPLDAVSKAFG 125
Query: 112 AQDAVMRVHSRIAEIGFEPG-QAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVF 170
V R++ ++ PG +AV + ++ + ++G ++G+GG + E++ A+GA +
Sbjct: 126 L--IVRRINDEPFDVPSVPGSRAVTIKFMIPNSRMGSVIGKGGSKIKEIQDASGAKLNA- 182
Query: 171 PKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPM--------------KRP 216
+ GS + ++ V G ++ A ++I + L E M +RP
Sbjct: 183 --SEGMLPGST-ERVLSVAGVADAIHIATYYIGTILIEAQERMPSTSNSTYRPSSQPRRP 239
Query: 217 GPNNGHSYLPPFPEMPPPPFRPRHNP 242
G SY+P + P+ P HNP
Sbjct: 240 TQGGGSSYVPGYSHH--APYGPPHNP 263
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 93/203 (45%), Gaps = 45/203 (22%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIAD-ILPDSEERI------------ 96
V K + ++GS+IGKGGS ++ Q+ +GA + ++ +LP S ER+
Sbjct: 147 VTIKFMIPNSRMGSVIGKGGSKIKEIQDASGAKLNASEGMLPGSTERVLSVAGVADAIHI 206
Query: 97 -------VVISARE------NSEMRHS-----PAQ---DAVMRVHSRIAEIG---FEPGQ 132
++I A+E NS R S P Q + + +S A G P Q
Sbjct: 207 ATYYIGTILIEAQERMPSTSNSTYRPSSQPRRPTQGGGSSYVPGYSHHAPYGPPHNPPQQ 266
Query: 133 AVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFP-------KDQAPRCGSPHDEI 185
++ + + +GC++G+GG ++E+R + + I++ + AP GS + +
Sbjct: 267 LQTQQIYIPNDLVGCIIGKGGSKINEIRHMSASQIKIMEPGATGLGPNGAP-GGSEGERL 325
Query: 186 VQVIGNYHSVQDALFHITSRLRE 208
V + G ++Q A+ + RL +
Sbjct: 326 VVITGQPANIQMAVQLLYHRLEQ 348
Score = 38.5 bits (88), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Query: 350 STTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPK-PGATEGVVMVSGTSDQMR 408
+ TI+ +IP M V G+ S + I+ SGA + ++ PG+TE V+ V+G +D +
Sbjct: 146 AVTIKFMIPNSRMGSVIGKGGSKIKEIQDASGAKLNASEGMLPGSTERVLSVAGVADAIH 205
Query: 409 AAQSLIHAFIL 419
A I ++
Sbjct: 206 IATYYIGTILI 216
>gi|72084060|ref|XP_790705.1| PREDICTED: uncharacterized protein LOC585801 isoform 2
[Strongylocentrotus purpuratus]
Length = 557
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/176 (18%), Positives = 83/176 (47%), Gaps = 23/176 (13%)
Query: 47 EEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIA---DILPDSEERIVVISARE 103
+ + + K+L GS+IGKGG + Q +TG ++K++ D P ++ER+ +++
Sbjct: 74 DNKYMLKMLIPSTAAGSIIGKGGQTIAQLQRDTGTNVKLSKANDFYPGTQERVALLTGPV 133
Query: 104 NSEMRHSPAQDAVMRVHSRIAE---IGFEPGQAVVA--------RLLVHSQQIGCLLGRG 152
S + + + +I E +G + G + +++V + G ++G+G
Sbjct: 134 ES------LNNVAVFILDKIKESPQLGVKAGAETITSPERARQVKIVVPNSTAGLIIGKG 187
Query: 153 GHIVSEMRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRE 208
G ++ + +G+ +++ K + ++ + G + + A+ I ++++E
Sbjct: 188 GAMIKSIMEQSGSRVQISQKSDGITL---SERVITISGESDNNRKAMSFIVNKIQE 240
>gi|242764737|ref|XP_002340835.1| KH domain RNA binding protein [Talaromyces stipitatus ATCC 10500]
gi|218724031|gb|EED23448.1| KH domain RNA binding protein [Talaromyces stipitatus ATCC 10500]
Length = 461
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 86/395 (21%), Positives = 156/395 (39%), Gaps = 74/395 (18%)
Query: 52 FKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMRHSP 111
+ + + + IGKGG V + +G+ ++D + ERI+ +S
Sbjct: 106 IRAVISSQEAATCIGKGGENVSKIRQLSGSKCTVSDYSRGAVERILTVSG---------- 155
Query: 112 AQDAVMRVHSRIAE-IGFEPGQAVVA--------RLLVHSQQIGCLLGRGGHIVSEMRRA 162
QDAV + I + EP +A RLL+ IG ++G+GG + E++ A
Sbjct: 156 PQDAVAKAFGLIIRTLNNEPLEAPSTAQSKTYPLRLLIPHILIGSIIGKGGVRIREIQEA 215
Query: 163 TGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKRPGPNNGH 222
+GA R+ D + + V+G +V A +++ L E + +R G
Sbjct: 216 SGA--RLNASDACLPLSTERSLV--VLGVADAVHIATYYVAVTLVEQL--TERFGGPAAS 269
Query: 223 SYLP--------PFPEMPPPPFRPRHNPASPGSYPSPVGPFHSMDRGMGPSQPFDHQAAF 274
+Y M P+ P QP Q
Sbjct: 270 AYATRSGGPAGVVPGGMQVVPYVP---------------------------QPAGGQYGH 302
Query: 275 SHGMDPMVPPNSDRIPFPYGSERPGHGPTFDRPPSPRSWTPQGVGGGDPRGFDASSG--- 331
+ P N+ P PYG+ GP +P + P GGG R A +G
Sbjct: 303 PDSVRRHYPQNNRPGPGPYGAPYAHGGPAAQ---APVAQPPLHYGGGAARAPYAGAGPHQ 359
Query: 332 ----FTPRNRPVESGNH--AAILTS--TTIEVVIPQLYMAHVYGENNSNLSHIRQISGAN 383
P +P +G A +++S T ++ IP + + G+ + ++ IR +SG+
Sbjct: 360 PAPYGAPHAQPHGAGAQPLAGVVSSQPITQQIYIPNDMVGAIIGKGGTKINEIRHLSGSV 419
Query: 384 VVVNDPKPGATEGVVMVSGTSDQMRAAQSLIHAFI 418
+ +N+P+ + E +V ++GT + + A +++A +
Sbjct: 420 IKINEPQENSNERLVTITGTQECNQMALYMLYARL 454
>gi|449270977|gb|EMC81613.1| Insulin-like growth factor 2 mRNA-binding protein 3 [Columba livia]
Length = 584
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 81/151 (53%), Gaps = 15/151 (9%)
Query: 61 VGSLIGKGGSIVRTFQNETGASIKIADIL-PDSEERIVVISARENSEMRHSPAQDAVMRV 119
VG++IGK G ++ GASIKIA PD++ R+V+I+ ++ + A R+
Sbjct: 421 VGAIIGKQGQHIKQLSRFAGASIKIAPAEGPDAKLRMVIITGPPEAQFK------AQGRI 474
Query: 120 HSRIAEIGF---EPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAP 176
+ ++ E F + + A + V S G ++G+GG V+E++ T A + V P+DQ P
Sbjct: 475 YGKLKEENFFGPKEEVKLEAHIKVPSYAAGRVIGKGGKTVNELQNLTSAEV-VVPRDQTP 533
Query: 177 RCGSPHDE-IVQVIGNYHSVQDALFHITSRL 206
+D+ +V++ G++++ Q A I L
Sbjct: 534 ---DENDQVVVKITGHFYACQLAQRKIQEIL 561
>gi|222622454|gb|EEE56586.1| hypothetical protein OsJ_05944 [Oryza sativa Japonica Group]
Length = 674
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 81/195 (41%), Gaps = 39/195 (20%)
Query: 60 KVGSLIGKGGSIVRTFQNETGASIKIA---DILPDSEERIVVISARENSEMRHSPAQDAV 116
+VG +IGK G ++ Q ++GA I++ D LP S+ R V +S D +
Sbjct: 128 RVGVIIGKSGETIKNLQLQSGAKIQVTRDLDALPGSQTRPVELSGTP----------DQI 177
Query: 117 MRVHSRIAEIGFEPGQAVVARL-----------------LVHSQQIGCLLGRGGHIVSEM 159
R I E+ E A L + + ++G ++G+GG + M
Sbjct: 178 SRAEQLINEVLAEADAASSGNLSSRKYNAPQPGADQFQMKIANNKVGLVIGKGGETIKSM 237
Query: 160 RRATGASIRVFPKDQAPRCGSPHDE-IVQVIGNYHSVQDA---LFHITSRLRETIFPMKR 215
+ +GA I+V P P G P E V + G ++ A + +TS R PM
Sbjct: 238 QAKSGARIQVVPLHLPP--GDPATERTVYIDGTQEQIETAKQLVIEVTSENR-ARNPMS- 293
Query: 216 PGPNNGHSYLPPFPE 230
G + Y PP P+
Sbjct: 294 -GGYSQQGYRPPRPQ 307
>gi|148226749|ref|NP_001081752.1| insulin-like growth factor 2 mRNA-binding protein 3-A [Xenopus
laevis]
gi|82227951|sp|O73932.1|IF23A_XENLA RecName: Full=Insulin-like growth factor 2 mRNA-binding protein
3-A; Short=IGF2 mRNA-binding protein 3-A; Short=IMP-3-A;
AltName: Full=69 kDa RNA-binding protein A; AltName:
Full=IGF-II mRNA-binding protein 3-A; AltName: Full=KH
domain-containing transcription factor B3-A; AltName:
Full=RNA-binding protein Vera-A; AltName:
Full=Trans-acting factor B3-A; AltName: Full=VICKZ
family member 3-A; AltName: Full=VLE-binding protein A;
AltName: Full=Vg1 RNA-binding protein A; Short=Vg1
RBP-A; AltName: Full=Vg1 localization element binding
protein A; AltName: Full=VgLE-binding and ER association
protein A
gi|3136158|gb|AAC41285.1| RNA binding protein Vera [Xenopus laevis]
gi|3172449|gb|AAC18598.1| Vg1 RNA binding protein variant D [Xenopus laevis]
gi|213623978|gb|AAI70477.1| Vg1 RNA binding protein Vera [Xenopus laevis]
gi|213623980|gb|AAI70479.1| Vg1 RNA binding protein Vera [Xenopus laevis]
gi|213625273|gb|AAI70224.1| Vg1 RNA binding protein Vera [Xenopus laevis]
gi|213626044|gb|AAI70196.1| Vg1 RNA binding protein Vera [Xenopus laevis]
Length = 594
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 82/153 (53%), Gaps = 19/153 (12%)
Query: 61 VGSLIGKGGSIVRTFQNETGASIKIADIL-PDSEERIVVISARENSEMRHSPAQDAVMRV 119
VG++IGK G ++ GASIKIA PD++ R+V+I+ ++ + A R+
Sbjct: 430 VGAIIGKQGQHIKQLSRFAGASIKIAPAEGPDAKLRMVIITGPPEAQFK------AQGRI 483
Query: 120 HSRIAEIG-FEPGQAVVARLLVH----SQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQ 174
+ ++ E F P + V +L H S G ++G+GG V+E++ T A + V P+DQ
Sbjct: 484 YGKLKEENFFGPKEEV--KLETHIKVPSYAAGRVIGKGGKTVNELQNLTSAEV-VVPRDQ 540
Query: 175 APRCGSPHDE-IVQVIGNYHSVQDALFHITSRL 206
P +DE +V++ G++++ Q A I L
Sbjct: 541 TP---DENDEVVVKITGHFYASQLAQRKIQEIL 570
>gi|74151175|dbj|BAE27710.1| unnamed protein product [Mus musculus]
Length = 579
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 83/154 (53%), Gaps = 15/154 (9%)
Query: 61 VGSLIGKGGSIVRTFQNETGASIKIADI-LPDSEERIVVISARENSEMRHSPAQDAVMRV 119
VG++IGK G ++ GASIKIA PD++ R+V+I+ ++ + A R+
Sbjct: 417 VGAIIGKQGQHIKQLSRFAGASIKIAPAEAPDAKVRMVIITGPPEAQFK------AQGRI 470
Query: 120 HSRIAEIGF-EPGQAVV--ARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAP 176
+ +I E F P + V A + V S G ++G+GG V+E++ + A + V P+DQ P
Sbjct: 471 YGKIKEENFVSPKEEVKLEAHIRVPSFAAGRVIGKGGKTVNELQSLSSAEV-VVPRDQTP 529
Query: 177 RCGSPHDE-IVQVIGNYHSVQDALFHITSRLRET 209
+D+ +V++ G++++ Q A I L +
Sbjct: 530 ---DENDQVVVKITGHFYACQVAQRKIQEILTQV 560
Score = 43.5 bits (101), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 37/161 (22%), Positives = 77/161 (47%), Gaps = 11/161 (6%)
Query: 52 FKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKI--ADILPDSEERIVVISARENSEMRH 109
+LL VG++IGK G+ +R +T + I + + +E+ I ++S E +
Sbjct: 198 LRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHRKENTGAAEKSITILSTPEGT---- 253
Query: 110 SPAQDAVMRV-HSRIAEIGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIR 168
S A +++ + H +I F + + ++L H+ +G L+G+ G + ++ + T I
Sbjct: 254 SAACKSILEIMHKEAQDIKF--TEEIPLKILAHNNFVGRLIGKEGRNLKKIEQDTDTKIT 311
Query: 169 VFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRET 209
+ P Q +P + + V G+ + A I ++RE+
Sbjct: 312 ISPL-QELTLYNP-ERTITVKGSVETCAKAEEEIMKKIRES 350
>gi|218190341|gb|EEC72768.1| hypothetical protein OsI_06421 [Oryza sativa Indica Group]
Length = 658
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 92/220 (41%), Gaps = 45/220 (20%)
Query: 60 KVGSLIGKGGSIVRTFQNETGASIKIA---DILPDSEERIVVISARENSEMRHSPAQDAV 116
+VG +IGK G ++ Q ++GA I++ D LP S+ R V E+ +P D +
Sbjct: 112 RVGVIIGKSGETIKNLQLQSGAKIQVTRDLDALPGSQTRPV--------ELSGTP--DQI 161
Query: 117 MRVHSRIAEIGFEPGQAVVARL-----------------LVHSQQIGCLLGRGGHIVSEM 159
R I E+ E A L + + ++G ++G+GG + M
Sbjct: 162 SRAEQLINEVLAEADAASSGNLSSRKYNAPQPGADQFQMKIANNKVGLVIGKGGETIKSM 221
Query: 160 RRATGASIRVFPKDQAPRCGSPHDE-IVQVIGNYHSVQDA---LFHITSRLRETIFPMKR 215
+ +GA I+V P P G P E V + G ++ A + +TS R PM
Sbjct: 222 QAKSGARIQVVPLHLPP--GDPATERTVYIDGTQEQIETAKQLVIEVTSENRAR-NPMS- 277
Query: 216 PGPNNGHSYLPPFPEMPPPPF------RPRHNPASPGSYP 249
G + Y PP P+ P +P + PG+YP
Sbjct: 278 -GGYSQQGYRPPRPQSNWGPHGGAPMQQPGYGYMQPGAYP 316
>gi|4539010|emb|CAB39631.1| putative DNA-directed RNA polymerase [Arabidopsis thaliana]
gi|7267703|emb|CAB78130.1| putative DNA-directed RNA polymerase [Arabidopsis thaliana]
Length = 748
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 81/192 (42%), Gaps = 26/192 (13%)
Query: 60 KVGSLIGKGGSIVRTFQNETGASIKI---ADILPDSEER-------IVVISAREN----- 104
KVG LIGKGG +R Q +GA I+I ++ P S R + I + E
Sbjct: 209 KVGVLIGKGGETIRYLQFNSGAKIQILRDSEADPSSALRPVEIIGSVACIESAEKLISAV 268
Query: 105 ---SEMRHSPAQDAVMRVHSRIAEIGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRR 161
+E SPA V R H IG P Q + V + ++G ++GRGG + M+
Sbjct: 269 IAEAEAGGSPA--LVARGHPSTHAIGI-PEQ---IEIKVPNDKVGLIIGRGGETIKNMQT 322
Query: 162 ATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKRPGPNNG 221
+GA ++ P Q + V++ G+ + A I + + P G N
Sbjct: 323 RSGARTQLIP--QHAEGDGLKERTVRISGDKMQIDIATDMIKDVMNQNARPSSYSGGYNQ 380
Query: 222 HSYLPPFPEMPP 233
+Y P P PP
Sbjct: 381 PAYRPQGPGGPP 392
>gi|357465707|ref|XP_003603138.1| Far upstream element-binding protein [Medicago truncatula]
gi|355492186|gb|AES73389.1| Far upstream element-binding protein [Medicago truncatula]
Length = 1145
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 62/130 (47%), Gaps = 28/130 (21%)
Query: 60 KVGSLIGKGGSIVRTFQNETGASIKIA---DILPDSEERIVVISARENSEMRHSPAQDAV 116
+VG LIGKGG ++ Q ++GA I++ D P+S+ R+V E+ +P DAV
Sbjct: 96 RVGVLIGKGGETIKYLQMQSGAKIQVTRDMDADPNSQTRMV--------ELMGTP--DAV 145
Query: 117 MRVHSRIAEIGFEPGQAV----VARLLVHS-----------QQIGCLLGRGGHIVSEMRR 161
I E+ E R++ S ++G ++G+GG + M+
Sbjct: 146 SSAEKLINEVLAEAEAGASGGGTRRMVAQSGGDEFVMQIPNNKVGLIIGKGGETIKSMQA 205
Query: 162 ATGASIRVFP 171
+TGA I+V P
Sbjct: 206 STGARIQVIP 215
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.318 0.137 0.422
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,936,000,699
Number of Sequences: 23463169
Number of extensions: 394610392
Number of successful extensions: 1418716
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 1110
Number of HSP's successfully gapped in prelim test: 6413
Number of HSP's that attempted gapping in prelim test: 1353354
Number of HSP's gapped (non-prelim): 47503
length of query: 424
length of database: 8,064,228,071
effective HSP length: 145
effective length of query: 279
effective length of database: 8,957,035,862
effective search space: 2499013005498
effective search space used: 2499013005498
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 78 (34.7 bits)