BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 014452
(424 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P58223|Y4837_ARATH KH domain-containing protein At4g18375 OS=Arabidopsis thaliana
GN=At4g18375 PE=2 SV=1
Length = 606
Score = 100 bits (248), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 61/184 (33%), Positives = 103/184 (55%), Gaps = 16/184 (8%)
Query: 30 SSGPGHETVGGRNRMFYEEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADIL 89
SS P GG +R EE+VFK+LC L + +IGKGGS ++ + +G+ I++ D
Sbjct: 295 SSLPVTHGFGGSSR---SEELVFKVLCPLCNIMRVIGKGGSTIKRIREASGSCIEVNDSR 351
Query: 90 PDS--EERIVVISARENSEMRHSPAQDAVMRVHSRIAEIGFEPGQAVVARLLVHSQQIGC 147
+E +++++A E+ + S A +AV+ + I + E + V +LLV S+ IGC
Sbjct: 352 TKCGDDECVIIVTATESPDDMKSMAVEAVLLLQEYIND---EDAENVKMQLLVSSKVIGC 408
Query: 148 LLGRGGHIVSEMRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLR 207
++G+ G +++E+R+ T A+I + D++V+V G SV+DAL I RLR
Sbjct: 409 VIGKSGSVINEIRKRTNANICISK--------GKKDDLVEVSGEVSSVRDALIQIVLRLR 460
Query: 208 ETIF 211
E +
Sbjct: 461 EDVL 464
Score = 86.7 bits (213), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 101/408 (24%), Positives = 169/408 (41%), Gaps = 79/408 (19%)
Query: 42 NRMFYEEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVI-- 99
+++ +E VV+++LC +D VG +IGK G ++ ++ T A IK+ D L +R++ I
Sbjct: 28 DKINRDELVVYRILCPIDVVGGVIGKSGKVINAIRHNTKAKIKVFDQLHGCSQRVITIYC 87
Query: 100 SARENSE------MRHSP---AQDAVMRVHSRIA--------EIGFEPGQAVVARLLVHS 142
S +E E + P AQDA+++V+ I + + RLLV
Sbjct: 88 SVKEKQEEIGFTKSENEPLCCAQDALLKVYDAIVASDEENNTKTNVDRDDNKECRLLVPF 147
Query: 143 QQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAP---RCGSPHDEIVQVIGNYHSVQDAL 199
Q L+G+ G + +RR T AS++V KD + C +D +V + G SV+ AL
Sbjct: 148 SQSSSLIGKAGENIKRIRRRTRASVKVVSKDVSDPSHVCAMEYDNVVVISGEPESVKQAL 207
Query: 200 FHITSRLRETIFPMKRPGPNNGHSYLPPFPEMPPPPFRPRHNPASPGSYPSPVGPFHSMD 259
F + S + I P + ++ +P + P P + G Y + H +
Sbjct: 208 FAV-SAIMYKINPRENIPLDSTSQDVPAASVIVPSDLSNSVYPQT-GFYSNQ---DHILQ 262
Query: 260 RGMGPSQPFDHQAAFSHGMDPMVPPNSDRIPFPYGSERPGHGPTFDRP-PSPRSWTPQGV 318
+G G F+ + S+ G+ T P P S P
Sbjct: 263 QGAGVPSYFNALSV---------------------SDFQGYAETAANPVPVFASSLP--- 298
Query: 319 GGGDPRGFDASSGFTPRNRPVESGNHAAILTSTTIEVVIPQLYMAHVYGENNSNLSHIRQ 378
+ GF +R E +V+ P + V G+ S + IR+
Sbjct: 299 ---------VTHGFGGSSRSEE----------LVFKVLCPLCNIMRVIGKGGSTIKRIRE 339
Query: 379 ISGANVVVND--PKPGATEGVVMVSGTS--DQMRA----AQSLIHAFI 418
SG+ + VND K G E V++V+ T D M++ A L+ +I
Sbjct: 340 ASGSCIEVNDSRTKCGDDECVIIVTATESPDDMKSMAVEAVLLLQEYI 387
Score = 58.5 bits (140), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 48/71 (67%)
Query: 349 TSTTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATEGVVMVSGTSDQMR 408
+S+ +E++IP M+ V G+ NL +IR+ISGA + ++ K + + ++SGT +QMR
Sbjct: 534 SSSALEILIPAHAMSKVMGKGGGNLENIRRISGAMIEISASKTSHGDHIALLSGTLEQMR 593
Query: 409 AAQSLIHAFIL 419
A++L+ AF++
Sbjct: 594 CAENLVQAFVM 604
Score = 33.9 bits (76), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 38/76 (50%), Gaps = 8/76 (10%)
Query: 122 RIAEIGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAPRCGSP 181
RI+ + VV R+L +G ++G+ G +++ +R T A I+VF DQ C
Sbjct: 24 RISHDKINRDELVVYRILCPIDVVGGVIGKSGKVINAIRHNTKAKIKVF--DQLHGCSQ- 80
Query: 182 HDEIVQVIGNYHSVQD 197
+VI Y SV++
Sbjct: 81 -----RVITIYCSVKE 91
>sp|O19048|PCBP1_RABIT Poly(rC)-binding protein 1 OS=Oryctolagus cuniculus GN=PCBP1 PE=2
SV=1
Length = 356
Score = 79.7 bits (195), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 92/372 (24%), Positives = 158/372 (42%), Gaps = 45/372 (12%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMR- 108
+ +LL H +VGS+IGK G V+ + E+GA I I++ + ERI+ ++ N+ +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISE--GNCPERIITLTGPTNAIFKA 71
Query: 109 HSPAQDAVMR-VHSRIAEIGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASI 167
+ D + ++S + V RL+V + Q G L+G+GG + E+R +TGA +
Sbjct: 72 FAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQV 131
Query: 168 RVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKRPGPNNGHSYLPP 227
+V D P + + + + G SV + + I + ET+ + +
Sbjct: 132 QV-AGDMLP---NSTERAITIAGVPQSVTECVKQICLVMLETL-------SQSPQGRVMT 180
Query: 228 FPEMPPPPFRPRHNPASPGSYPSPVGPFHSMDRGMGPSQPFD-HQAAFSHGMDPMVPPNS 286
P P P P G H+ GP P D + H + P+
Sbjct: 181 IPYQPMPASSPVICAGGQDRCSDAAGYPHATHDLEGP--PLDAYSIQGQHTISPL----- 233
Query: 287 DRIPFPYGSERPGHGPTFDRPPSPRSWTPQGVGGGDPRGFDASSGFTPRNRPVESGNHAA 346
D + + H GG G D+SS P G A+
Sbjct: 234 DLAKLNQVARQQSHFAMMH-------------GGTGFAGIDSSS-------PEVKGYWAS 273
Query: 347 I--LTSTTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATEGVVMVSGTS 404
+ T TT E+ IP + + G +N++ IRQ+SGA + + +P G++ V ++G++
Sbjct: 274 LDASTQTTHELTIPNNLIGCIIGRQGANINEIRQMSGAQIKIANPVEGSSGRQVTITGSA 333
Query: 405 DQMRAAQSLIHA 416
+ AQ LI+A
Sbjct: 334 ASISLAQYLINA 345
Score = 34.7 bits (78), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 39/70 (55%), Gaps = 5/70 (7%)
Query: 137 RLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQ 196
L + + IGC++GR G ++E+R+ +GA I++ P GS + V + G+ S+
Sbjct: 283 ELTIPNNLIGCIIGRQGANINEIRQMSGAQIKIAN----PVEGSSGRQ-VTITGSAASIS 337
Query: 197 DALFHITSRL 206
A + I +RL
Sbjct: 338 LAQYLINARL 347
>sp|P60335|PCBP1_MOUSE Poly(rC)-binding protein 1 OS=Mus musculus GN=Pcbp1 PE=1 SV=1
Length = 356
Score = 79.7 bits (195), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 92/372 (24%), Positives = 158/372 (42%), Gaps = 45/372 (12%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMR- 108
+ +LL H +VGS+IGK G V+ + E+GA I I++ + ERI+ ++ N+ +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISE--GNCPERIITLTGPTNAIFKA 71
Query: 109 HSPAQDAVMR-VHSRIAEIGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASI 167
+ D + ++S + V RL+V + Q G L+G+GG + E+R +TGA +
Sbjct: 72 FAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQV 131
Query: 168 RVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKRPGPNNGHSYLPP 227
+V D P + + + + G SV + + I + ET+ + +
Sbjct: 132 QV-AGDMLP---NSTERAITIAGVPQSVTECVKQICLVMLETL-------SQSPQGRVMT 180
Query: 228 FPEMPPPPFRPRHNPASPGSYPSPVGPFHSMDRGMGPSQPFD-HQAAFSHGMDPMVPPNS 286
P P P P G H+ GP P D + H + P+
Sbjct: 181 IPYQPMPASSPVICAGGQDRCSDAAGYPHATHDLEGP--PLDAYSIQGQHTISPL----- 233
Query: 287 DRIPFPYGSERPGHGPTFDRPPSPRSWTPQGVGGGDPRGFDASSGFTPRNRPVESGNHAA 346
D + + H GG G D+SS P G A+
Sbjct: 234 DLAKLNQVARQQSHFAMMH-------------GGTGFAGIDSSS-------PEVKGYWAS 273
Query: 347 I--LTSTTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATEGVVMVSGTS 404
+ T TT E+ IP + + G +N++ IRQ+SGA + + +P G++ V ++G++
Sbjct: 274 LDASTQTTHELTIPNNLIGCIIGRQGANINEIRQMSGAQIKIANPVEGSSGRQVTITGSA 333
Query: 405 DQMRAAQSLIHA 416
+ AQ LI+A
Sbjct: 334 ASISLAQYLINA 345
Score = 34.7 bits (78), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 39/70 (55%), Gaps = 5/70 (7%)
Query: 137 RLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQ 196
L + + IGC++GR G ++E+R+ +GA I++ P GS + V + G+ S+
Sbjct: 283 ELTIPNNLIGCIIGRQGANINEIRQMSGAQIKIAN----PVEGSSGRQ-VTITGSAASIS 337
Query: 197 DALFHITSRL 206
A + I +RL
Sbjct: 338 LAQYLINARL 347
>sp|Q15365|PCBP1_HUMAN Poly(rC)-binding protein 1 OS=Homo sapiens GN=PCBP1 PE=1 SV=2
Length = 356
Score = 79.7 bits (195), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 92/372 (24%), Positives = 158/372 (42%), Gaps = 45/372 (12%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMR- 108
+ +LL H +VGS+IGK G V+ + E+GA I I++ + ERI+ ++ N+ +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISE--GNCPERIITLTGPTNAIFKA 71
Query: 109 HSPAQDAVMR-VHSRIAEIGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASI 167
+ D + ++S + V RL+V + Q G L+G+GG + E+R +TGA +
Sbjct: 72 FAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQV 131
Query: 168 RVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKRPGPNNGHSYLPP 227
+V D P + + + + G SV + + I + ET+ + +
Sbjct: 132 QV-AGDMLP---NSTERAITIAGVPQSVTECVKQICLVMLETL-------SQSPQGRVMT 180
Query: 228 FPEMPPPPFRPRHNPASPGSYPSPVGPFHSMDRGMGPSQPFD-HQAAFSHGMDPMVPPNS 286
P P P P G H+ GP P D + H + P+
Sbjct: 181 IPYQPMPASSPVICAGGQDRCSDAAGYPHATHDLEGP--PLDAYSIQGQHTISPL----- 233
Query: 287 DRIPFPYGSERPGHGPTFDRPPSPRSWTPQGVGGGDPRGFDASSGFTPRNRPVESGNHAA 346
D + + H GG G D+SS P G A+
Sbjct: 234 DLAKLNQVARQQSHFAMMH-------------GGTGFAGIDSSS-------PEVKGYWAS 273
Query: 347 I--LTSTTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATEGVVMVSGTS 404
+ T TT E+ IP + + G +N++ IRQ+SGA + + +P G++ V ++G++
Sbjct: 274 LDASTQTTHELTIPNNLIGCIIGRQGANINEIRQMSGAQIKIANPVEGSSGRQVTITGSA 333
Query: 405 DQMRAAQSLIHA 416
+ AQ LI+A
Sbjct: 334 ASISLAQYLINA 345
Score = 34.7 bits (78), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 39/70 (55%), Gaps = 5/70 (7%)
Query: 137 RLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQ 196
L + + IGC++GR G ++E+R+ +GA I++ P GS + V + G+ S+
Sbjct: 283 ELTIPNNLIGCIIGRQGANINEIRQMSGAQIKIAN----PVEGSSGRQ-VTITGSAASIS 337
Query: 197 DALFHITSRL 206
A + I +RL
Sbjct: 338 LAQYLINARL 347
>sp|Q5E9A3|PCBP1_BOVIN Poly(rC)-binding protein 1 OS=Bos taurus GN=PCBP1 PE=2 SV=1
Length = 356
Score = 79.7 bits (195), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 92/372 (24%), Positives = 158/372 (42%), Gaps = 45/372 (12%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMR- 108
+ +LL H +VGS+IGK G V+ + E+GA I I++ + ERI+ ++ N+ +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISE--GNCPERIITLTGPTNAIFKA 71
Query: 109 HSPAQDAVMR-VHSRIAEIGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASI 167
+ D + ++S + V RL+V + Q G L+G+GG + E+R +TGA +
Sbjct: 72 FAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQV 131
Query: 168 RVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKRPGPNNGHSYLPP 227
+V D P + + + + G SV + + I + ET+ + +
Sbjct: 132 QV-AGDMLP---NSTERAITIAGVPQSVTECVKQICLVMLETL-------SQSPQGRVMT 180
Query: 228 FPEMPPPPFRPRHNPASPGSYPSPVGPFHSMDRGMGPSQPFD-HQAAFSHGMDPMVPPNS 286
P P P P G H+ GP P D + H + P+
Sbjct: 181 IPYQPMPASSPVICAGGQDRCSDAAGYPHATHDLEGP--PLDAYSIQGQHTISPL----- 233
Query: 287 DRIPFPYGSERPGHGPTFDRPPSPRSWTPQGVGGGDPRGFDASSGFTPRNRPVESGNHAA 346
D + + H GG G D+SS P G A+
Sbjct: 234 DLAKLNQVARQQSHFAMMH-------------GGTGFAGIDSSS-------PEVKGYWAS 273
Query: 347 I--LTSTTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATEGVVMVSGTS 404
+ T TT E+ IP + + G +N++ IRQ+SGA + + +P G++ V ++G++
Sbjct: 274 LDASTQTTHELTIPNNLIGCIIGRQGANINEIRQMSGAQIKIANPVEGSSGRQVTITGSA 333
Query: 405 DQMRAAQSLIHA 416
+ AQ LI+A
Sbjct: 334 ASISLAQYLINA 345
Score = 34.7 bits (78), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 39/70 (55%), Gaps = 5/70 (7%)
Query: 137 RLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQ 196
L + + IGC++GR G ++E+R+ +GA I++ P GS + V + G+ S+
Sbjct: 283 ELTIPNNLIGCIIGRQGANINEIRQMSGAQIKIAN----PVEGSSGRQ-VTITGSAASIS 337
Query: 197 DALFHITSRL 206
A + I +RL
Sbjct: 338 LAQYLINARL 347
>sp|Q61990|PCBP2_MOUSE Poly(rC)-binding protein 2 OS=Mus musculus GN=Pcbp2 PE=1 SV=1
Length = 362
Score = 75.5 bits (184), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 95/393 (24%), Positives = 167/393 (42%), Gaps = 84/393 (21%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMRH 109
+ +LL H +VGS+IGK G V+ + E+GA I I++ + ERI+ ++ N+ +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISE--GNCPERIITLAGPTNAIFKA 71
Query: 110 SPAQDAVMRVHSRIAEIGFEPGQA----VVARLLVHSQQIGCLLGRGGHIVSEMRRATGA 165
+ ++ I+ A V RL+V + Q G L+G+GG + E+R +TGA
Sbjct: 72 FAM--IIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGA 129
Query: 166 SIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKRPGPNNGHSYL 225
++V D P + + + + G S+ + + I + E+ P G +
Sbjct: 130 QVQV-AGDMLP---NSTERAITIAGIPQSIIECVKQICVVMLES--------PPKGVTI- 176
Query: 226 PPFPEMPPPPFRPRHNPASPGSYPSPVGPFHSMDRGMGPSQPFDHQAAFSHGMDPMVPPN 285
P+RP+ P+S SPV DR +S G
Sbjct: 177 ---------PYRPK--PSS-----SPVIFAGGQDR-------------YSTG-------- 199
Query: 286 SDRIPFPYGSERPGHGPTFDRPPSPRSWTPQG-----------------------VGGGD 322
SD FP+ + P + PP ++T QG + G+
Sbjct: 200 SDSASFPHTTPSMCLNPDLEGPP-LEAYTIQGQYAIPQPDLTKLHQLAMQQSHFPMTHGN 258
Query: 323 PRGFDASSGFTPRNRPVESGNHAAILTSTTIEVVIPQLYMAHVYGENNSNLSHIRQISGA 382
GF +P + +G A+ T T+ E+ IP + + G + ++ IRQ+SGA
Sbjct: 259 -TGFSGIESSSPEVKGYWAGLDASAQT-TSHELTIPNDLIGCIIGRQGAKINEIRQMSGA 316
Query: 383 NVVVNDPKPGATEGVVMVSGTSDQMRAAQSLIH 415
+ + +P G+T+ V ++G++ + AQ LI+
Sbjct: 317 QIKIANPVEGSTDRQVTITGSAASISLAQYLIN 349
Score = 36.6 bits (83), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 39/75 (52%), Gaps = 5/75 (6%)
Query: 132 QAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAPRCGSPHDEIVQVIGN 191
Q L + + IGC++GR G ++E+R+ +GA I++ P GS D V + G+
Sbjct: 283 QTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKI----ANPVEGS-TDRQVTITGS 337
Query: 192 YHSVQDALFHITSRL 206
S+ A + I RL
Sbjct: 338 AASISLAQYLINVRL 352
>sp|Q15366|PCBP2_HUMAN Poly(rC)-binding protein 2 OS=Homo sapiens GN=PCBP2 PE=1 SV=1
Length = 365
Score = 74.7 bits (182), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 95/399 (23%), Positives = 167/399 (41%), Gaps = 93/399 (23%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMRH 109
+ +LL H +VGS+IGK G V+ + E+GA I I++ + ERI+ ++ N+ +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISE--GNCPERIITLAGPTNAIFKA 71
Query: 110 SPAQDAVMRVHSRIAEIGFEPGQA----VVARLLVHSQQIGCLLGRGGHIVSEMRRATGA 165
+ ++ I+ A V RL+V + Q G L+G+GG + E+R +TGA
Sbjct: 72 FAM--IIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGA 129
Query: 166 SIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKRPGPNNGHSYL 225
++V D P + + + + G S+ + + I + ET+ S
Sbjct: 130 QVQV-AGDMLP---NSTERAITIAGIPQSIIECVKQICVVMLETL------------SQS 173
Query: 226 PPFPEMPPPPFRPRHNPASPGSYPSPVGPFHSMDRGMGPSQPFDHQAAFSHGMDPMVPPN 285
P P+ P+RP+ P+S SPV DR +S G
Sbjct: 174 P--PKGVTIPYRPK--PSS-----SPVIFAGGQDR-------------YSTG-------- 203
Query: 286 SDRIPFPYGSERPGHGPTFDRPPSPRSWTPQGV-------------------------GG 320
SD FP+ + P + PP ++T QG G
Sbjct: 204 SDSASFPHTTPSMCLNPDLEGPP-LEAYTIQGQYAIPQPDLTKLHQLAMQQSHFPMTHGN 262
Query: 321 GDPRGFDASS----GFTPRNRPVESGNHAAILTSTTIEVVIPQLYMAHVYGENNSNLSHI 376
G ++SS G+ + ++ +H E+ IP + + G + ++ I
Sbjct: 263 TGFSGIESSSPEVKGYWGLDASAQTTSH---------ELTIPNDLIGCIIGRQGAKINEI 313
Query: 377 RQISGANVVVNDPKPGATEGVVMVSGTSDQMRAAQSLIH 415
RQ+SGA + + +P G+T+ V ++G++ + AQ LI+
Sbjct: 314 RQMSGAQIKIANPVEGSTDRQVTITGSAASISLAQYLIN 352
Score = 36.6 bits (83), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 39/75 (52%), Gaps = 5/75 (6%)
Query: 132 QAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAPRCGSPHDEIVQVIGN 191
Q L + + IGC++GR G ++E+R+ +GA I++ P GS D V + G+
Sbjct: 286 QTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKI----ANPVEGST-DRQVTITGS 340
Query: 192 YHSVQDALFHITSRL 206
S+ A + I RL
Sbjct: 341 AASISLAQYLINVRL 355
>sp|Q9UNW9|NOVA2_HUMAN RNA-binding protein Nova-2 OS=Homo sapiens GN=NOVA2 PE=1 SV=1
Length = 492
Score = 62.8 bits (151), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 83/192 (43%), Gaps = 37/192 (19%)
Query: 41 RNRMFYEEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIA---DILPDSEERIV 97
R+ E E K+L GS+IGKGG + Q ETGA+IK++ D P + ER+
Sbjct: 24 RSNTGEEGEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVC 83
Query: 98 VISARENSEMRHSPAQDAVMRVHSRIAE---------------------IGFEPGQAVVA 136
++ +A+ VHS IAE P +A A
Sbjct: 84 LVQG----------TAEALNAVHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQA 133
Query: 137 RLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQ 196
+L+V + G ++G+GG V + +GA +++ Q P + + +V V G V
Sbjct: 134 KLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQL---SQKPEGINLQERVVTVSGEPEQVH 190
Query: 197 DALFHITSRLRE 208
A+ I +++E
Sbjct: 191 KAVSAIVQKVQE 202
Score = 37.4 bits (85), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 19/69 (27%), Positives = 38/69 (55%), Gaps = 7/69 (10%)
Query: 353 IEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPK---PGATEGVVMVSGTSDQMRA 409
++V+IP + G+ + +++ +GA + ++ K PG TE V +V GT++ + A
Sbjct: 35 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEALNA 94
Query: 410 AQSLIHAFI 418
+H+FI
Sbjct: 95 ----VHSFI 99
Score = 33.1 bits (74), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 27/43 (62%), Gaps = 3/43 (6%)
Query: 61 VGSLIGKGGSIVRTFQNETGASIKIA---DILPDSEERIVVIS 100
VG+++GKGG + +Q TGA I+I+ + LP + R V I+
Sbjct: 418 VGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTRNRRVTIT 460
>sp|Q5SF07|IF2B2_MOUSE Insulin-like growth factor 2 mRNA-binding protein 2 OS=Mus musculus
GN=Igf2bp2 PE=1 SV=1
Length = 592
Score = 62.4 bits (150), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 89/174 (51%), Gaps = 17/174 (9%)
Query: 46 YEEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADIL-PDSEERIVVISAREN 104
Y E+ L VG++IGK G+ ++ GASIKIA PD ER+V+I+
Sbjct: 417 YPEQETVSLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITGPPE 476
Query: 105 SEMRHSPAQDAVMRVHSRIAEIG-FEPGQAVV--ARLLVHSQQIGCLLGRGGHIVSEMRR 161
++ + A R+ ++ E F P + V A + V S G ++G+GG V+E++
Sbjct: 477 AQFK------AQGRIFGKLKEENFFNPKEEVKLEAHIRVPSSTAGRVIGKGGKTVNELQN 530
Query: 162 ATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKR 215
T A + + P+DQ P + IV++IG++ + Q A ++RE + +K+
Sbjct: 531 LTSAEV-IVPRDQTP--DENEEVIVRIIGHFFASQTA----QRKIREIVQQVKQ 577
Score = 36.2 bits (82), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 25/41 (60%)
Query: 48 EEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADI 88
EEV K+L H VG LIGK G ++ ++ETG I I+ +
Sbjct: 266 EEVPLKILAHNGFVGRLIGKEGRNLKKIEHETGTKITISSL 306
Score = 33.9 bits (76), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 45/211 (21%), Positives = 88/211 (41%), Gaps = 21/211 (9%)
Query: 52 FKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKI--ADILPDSEERIVVISARENSEMRH 109
++L VG++IGK G ++ +T + + I + +E+ + + + E +
Sbjct: 189 LRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEKPVTIHATPEGT---- 244
Query: 110 SPAQDAVMRVHSRIAEIGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRV 169
S A ++ + + A+ + + V ++L H+ +G L+G+ G + ++ TG I +
Sbjct: 245 SEACRMILEIMQKEAD-ETKLAEEVPLKILAHNGFVGRLIGKEGRNLKKIEHETGTKITI 303
Query: 170 FPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKRPGPNNGHSYLPPFP 229
Q +P + + V G + +A I +LRE F N + +P
Sbjct: 304 -SSLQDLSIYNP-ERTITVRGTIEACANAEIEIMKKLREA-FENDMLAVNQQANLIPGLN 360
Query: 230 -----------EMPPPPFRPRHNPASPGSYP 249
+ PPP PR P SP +P
Sbjct: 361 LSALGIFSTGLSVLPPPAGPRGVPPSPPYHP 391
>sp|P57721|PCBP3_HUMAN Poly(rC)-binding protein 3 OS=Homo sapiens GN=PCBP3 PE=2 SV=2
Length = 371
Score = 62.0 bits (149), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 67/123 (54%), Gaps = 6/123 (4%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMRH 109
+ +LL H +VGS+IGK G V+ + E+GA I I++ + ERIV I+ ++ +
Sbjct: 46 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE--GNCPERIVTITGPTDAIFK- 102
Query: 110 SPAQDAVMRVHSRIAEIGFEPGQA---VVARLLVHSQQIGCLLGRGGHIVSEMRRATGAS 166
+ A A I + P + V RL+V + Q G L+G+GG + E+R +TGA
Sbjct: 103 AFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQ 162
Query: 167 IRV 169
++V
Sbjct: 163 VQV 165
Score = 49.3 bits (116), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 44/81 (54%), Gaps = 11/81 (13%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIA-DILPDSEERIVVISARENSEMR 108
V +L+ + GSLIGKGGS ++ + TGA +++A D+LP+S ER V IS
Sbjct: 130 VTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNSTERAVTISG------- 182
Query: 109 HSPAQDAVMRVHSRIAEIGFE 129
DA+++ +I + E
Sbjct: 183 ---TPDAIIQCVKQICVVMLE 200
Score = 44.7 bits (104), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 42/74 (56%)
Query: 350 STTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATEGVVMVSGTSDQMRA 409
++T E+ IP + + G + ++ IRQ+SGA + + + G++E + ++GT +
Sbjct: 293 ASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQITITGTPANISL 352
Query: 410 AQSLIHAFILCGVT 423
AQ LI+A + VT
Sbjct: 353 AQYLINARLTSEVT 366
Score = 37.0 bits (84), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 34/69 (49%), Gaps = 1/69 (1%)
Query: 352 TIEVVIPQLYMAHVYGENNSNLSHIRQISGANV-VVNDPKPGATEGVVMVSGTSDQMRAA 410
T+ +V+P + G+ S + IR+ +GA V V D P +TE V +SGT D +
Sbjct: 131 TLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNSTERAVTISGTPDAIIQC 190
Query: 411 QSLIHAFIL 419
I +L
Sbjct: 191 VKQICVVML 199
Score = 35.8 bits (81), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 40/77 (51%), Gaps = 5/77 (6%)
Query: 137 RLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQ 196
L + + IGC++GR G ++E+R+ +GA I++ + GS +I + G ++
Sbjct: 297 ELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATE----GSSERQIT-ITGTPANIS 351
Query: 197 DALFHITSRLRETIFPM 213
A + I +RL + M
Sbjct: 352 LAQYLINARLTSEVTGM 368
Score = 33.5 bits (75), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 25/42 (59%)
Query: 59 DKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVIS 100
D +G +IG+ G+ + + +GA IKIA+ S ER + I+
Sbjct: 303 DLIGCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQITIT 344
>sp|P57722|PCBP3_MOUSE Poly(rC)-binding protein 3 OS=Mus musculus GN=Pcbp3 PE=2 SV=3
Length = 371
Score = 61.6 bits (148), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 67/123 (54%), Gaps = 6/123 (4%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMRH 109
+ +LL H +VGS+IGK G V+ + E+GA I I++ + ERIV I+ ++ +
Sbjct: 46 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE--GNCPERIVTITGPTDAIFK- 102
Query: 110 SPAQDAVMRVHSRIAEIGFEPGQA---VVARLLVHSQQIGCLLGRGGHIVSEMRRATGAS 166
+ A A I + P + V RL+V + Q G L+G+GG + E+R +TGA
Sbjct: 103 AFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQ 162
Query: 167 IRV 169
++V
Sbjct: 163 VQV 165
Score = 48.9 bits (115), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 44/81 (54%), Gaps = 11/81 (13%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIA-DILPDSEERIVVISARENSEMR 108
V +L+ + GSLIGKGGS ++ + TGA +++A D+LP+S ER V IS
Sbjct: 130 VTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNSTERAVTISG------- 182
Query: 109 HSPAQDAVMRVHSRIAEIGFE 129
DA+++ +I + E
Sbjct: 183 ---TPDAIIQCVKQICVVMLE 200
Score = 44.3 bits (103), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 42/74 (56%)
Query: 350 STTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATEGVVMVSGTSDQMRA 409
++T E+ IP + + G + ++ IRQ+SGA + + + G++E + ++GT +
Sbjct: 293 ASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQITITGTPANISL 352
Query: 410 AQSLIHAFILCGVT 423
AQ LI+A + VT
Sbjct: 353 AQYLINARLTSEVT 366
Score = 37.0 bits (84), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 34/69 (49%), Gaps = 1/69 (1%)
Query: 352 TIEVVIPQLYMAHVYGENNSNLSHIRQISGANV-VVNDPKPGATEGVVMVSGTSDQMRAA 410
T+ +V+P + G+ S + IR+ +GA V V D P +TE V +SGT D +
Sbjct: 131 TLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNSTERAVTISGTPDAIIQC 190
Query: 411 QSLIHAFIL 419
I +L
Sbjct: 191 VKQICVVML 199
Score = 35.8 bits (81), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 40/77 (51%), Gaps = 5/77 (6%)
Query: 137 RLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQ 196
L + + IGC++GR G ++E+R+ +GA I++ + GS +I + G ++
Sbjct: 297 ELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATE----GSSERQIT-ITGTPANIS 351
Query: 197 DALFHITSRLRETIFPM 213
A + I +RL + M
Sbjct: 352 LAQYLINARLTSEVTGM 368
Score = 33.5 bits (75), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 25/42 (59%)
Query: 59 DKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVIS 100
D +G +IG+ G+ + + +GA IKIA+ S ER + I+
Sbjct: 303 DLIGCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQITIT 344
>sp|Q9Y6M1|IF2B2_HUMAN Insulin-like growth factor 2 mRNA-binding protein 2 OS=Homo sapiens
GN=IGF2BP2 PE=1 SV=2
Length = 599
Score = 61.2 bits (147), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 82/157 (52%), Gaps = 13/157 (8%)
Query: 46 YEEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADIL-PDSEERIVVISAREN 104
Y E+ + L VG++IGK G+ ++ GASIKIA PD ER+V+I+
Sbjct: 424 YPEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITGPPE 483
Query: 105 SEMRHSPAQDAVMRVHSRIAEIG-FEPGQAVV--ARLLVHSQQIGCLLGRGGHIVSEMRR 161
++ + A R+ ++ E F P + V A + V S G ++G+GG V+E++
Sbjct: 484 AQFK------AQGRIFGKLKEENFFNPKEEVKLEAHIRVPSSTAGRVIGKGGKTVNELQN 537
Query: 162 ATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDA 198
T A + + P+DQ P + IV++IG++ + Q A
Sbjct: 538 LTSAEV-IVPRDQTP--DENEEVIVRIIGHFFASQTA 571
Score = 36.2 bits (82), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 25/41 (60%)
Query: 48 EEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADI 88
EE+ K+L H VG LIGK G ++ ++ETG I I+ +
Sbjct: 273 EEIPLKILAHNGLVGRLIGKEGRNLKKIEHETGTKITISSL 313
>sp|Q5RB68|IF2B2_PONAB Insulin-like growth factor 2 mRNA-binding protein 2 OS=Pongo abelii
GN=IGF2BP2 PE=2 SV=1
Length = 556
Score = 60.8 bits (146), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 82/157 (52%), Gaps = 13/157 (8%)
Query: 46 YEEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADIL-PDSEERIVVISAREN 104
Y E+ + L VG++IGK G+ ++ GASIKIA PD ER+V+I+
Sbjct: 381 YPEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITGPPE 440
Query: 105 SEMRHSPAQDAVMRVHSRIAEIG-FEPGQAVV--ARLLVHSQQIGCLLGRGGHIVSEMRR 161
++ + A R+ ++ E F P + V A + V S G ++G+GG V+E++
Sbjct: 441 AQFK------AQGRIFGKLKEENFFNPKEEVKLEAHIRVPSSTAGRVIGKGGKTVNELQN 494
Query: 162 ATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDA 198
T A + + P+DQ P + IV++IG++ + Q A
Sbjct: 495 LTSAEV-IVPRDQTP--DENEEVIVRIIGHFFASQTA 528
Score = 42.7 bits (99), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 69/153 (45%), Gaps = 28/153 (18%)
Query: 48 EEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIA---DILPDSEERIVVISAREN 104
EE+ K+L H VG LIGK G ++ ++ETG I I+ D+ + ER + +
Sbjct: 273 EEIPLKILAHNGLVGRLIGKEGRNLKKIEHETGTKITISSLQDLSIYNPERTITVKGTVE 332
Query: 105 S----------EMRHSPAQDAV-MRVHSRIAEIGF-------------EPGQAVVARLLV 140
+ ++R + D + + HS + P Q +V L +
Sbjct: 333 ACASAEIEIMKKLREAFENDMLAVNTHSGYFSSLYPHHQFGPFPHHHSYPEQEIV-NLFI 391
Query: 141 HSQQIGCLLGRGGHIVSEMRRATGASIRVFPKD 173
+Q +G ++G+ G + ++ R GASI++ P +
Sbjct: 392 PTQAVGAIIGKKGAHIKQLARFAGASIKIAPAE 424
>sp|Q08CK7|IF2B1_DANRE Insulin-like growth factor 2 mRNA-binding protein 1 OS=Danio rerio
GN=igf2bp1 PE=1 SV=1
Length = 598
Score = 59.7 bits (143), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 82/153 (53%), Gaps = 15/153 (9%)
Query: 61 VGSLIGKGGSIVRTFQNETGASIKIADI-LPDSEERIVVISARENSEMRHSPAQDAVMRV 119
VG+LIGK G ++ GASIKIA PDS+ R+V+++ ++ + A R+
Sbjct: 419 VGALIGKKGQHIKQLSRFAGASIKIAPAEAPDSKMRMVIVTGPPEAQFK------AQGRI 472
Query: 120 HSRIAEIGF---EPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAP 176
+ ++ E F + + + V + G ++G+GG V+E++ T A + V P++Q P
Sbjct: 473 YGKLKEENFFGPKEEVKLETHIKVAAAAAGRVIGKGGKTVNELQNLTAAEV-VVPREQTP 531
Query: 177 RCGSPHDE-IVQVIGNYHSVQDALFHITSRLRE 208
HD+ IV++IG++++ Q A I L +
Sbjct: 532 ---DEHDQVIVKIIGHFYASQLAQRKIRDILTQ 561
Score = 34.3 bits (77), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 70/157 (44%), Gaps = 13/157 (8%)
Query: 19 GYAPGYHSRGYSS--GPGHETVGGRNRMFYEEEVVFKLLCHLDKVGSLIGKGGSIVRTFQ 76
G PGY RG S PG G ++ +LL VG++IGK G+ +R
Sbjct: 170 GRRPGYGPRGTSRQMSPG----SGIPSKHQHADIPLRLLVPTQYVGAIIGKEGATIRNIT 225
Query: 77 NETGASIKI--ADILPDSEERIVVISARENSEMRHSPAQDAVMRVHSRIAEIGFEPGQAV 134
+T + I + + +E+ I + S E S A ++ + ++ A+ + V
Sbjct: 226 KQTQSKIDVHRKENAGAAEKPISIHSTPEGC----SAACRMILEIMNQEAK-DTKTADEV 280
Query: 135 VARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFP 171
++L H+ +G L+G+ G + ++ + T I + P
Sbjct: 281 PLKVLAHNNFVGRLIGKEGRNLKKVEQDTDTKITISP 317
>sp|P57723|PCBP4_HUMAN Poly(rC)-binding protein 4 OS=Homo sapiens GN=PCBP4 PE=2 SV=1
Length = 403
Score = 58.2 bits (139), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 64/247 (25%), Positives = 104/247 (42%), Gaps = 67/247 (27%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIA-DILPDSEERIVVISARENS--- 105
V +L+ + GSLIGK G+ ++ + TGA +++A D+LP+S ER V +S ++
Sbjct: 102 VTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQVAGDLLPNSTERAVTVSGVPDAIIL 161
Query: 106 -------EMRHSPAQDAVMRVHSRI------------------------AEI-------- 126
+ SP + A + H + AE+
Sbjct: 162 CVRQICAVILESPPKGATIPYHPSLSLGTVLLSANQGFSVQGQYGAVTPAEVTKLQQLSS 221
Query: 127 ------------GFEPG-QAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKD 173
G +PG Q LV + IGC++GR G +SE+R+ +GA I++ +
Sbjct: 222 HAVPFATPSVVPGLDPGTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKI--GN 279
Query: 174 QAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKRPGPNNGHSYL-----PPF 228
QA G H V + G+ S+ A + IT+ L ET P++ + L PP
Sbjct: 280 QAEGAGERH---VTITGSPVSIALAQYLITACL-ETAKSTSGGTPSSAPADLPAPFSPPL 335
Query: 229 PEMPPPP 235
+P P
Sbjct: 336 TALPTAP 342
Score = 49.7 bits (117), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 62/124 (50%), Gaps = 8/124 (6%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMRH 109
+ ++L H +VGS+IGK G V+ + ++ A I I++ ERI I+ + + H
Sbjct: 18 LTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISE--GSCPERITTITG-STAAVFH 74
Query: 110 SPAQDAVMRVHSRIAEIGFEPGQA----VVARLLVHSQQIGCLLGRGGHIVSEMRRATGA 165
+ + A ++ + G V RL++ + Q G L+G+ G + E+R TGA
Sbjct: 75 AVSMIA-FKLDEDLCAAPANGGNVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRETTGA 133
Query: 166 SIRV 169
++V
Sbjct: 134 QVQV 137
Score = 40.8 bits (94), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 36/65 (55%)
Query: 354 EVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATEGVVMVSGTSDQMRAAQSL 413
E ++P + V G S +S IRQ+SGA++ + + GA E V ++G+ + AQ L
Sbjct: 245 EFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQAEGAGERHVTITGSPVSIALAQYL 304
Query: 414 IHAFI 418
I A +
Sbjct: 305 ITACL 309
Score = 38.9 bits (89), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 34/69 (49%), Gaps = 1/69 (1%)
Query: 352 TIEVVIPQLYMAHVYGENNSNLSHIRQISGANV-VVNDPKPGATEGVVMVSGTSDQMRAA 410
T+ +VIP + G+ + + IR+ +GA V V D P +TE V VSG D +
Sbjct: 103 TLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQVAGDLLPNSTERAVTVSGVPDAIILC 162
Query: 411 QSLIHAFIL 419
I A IL
Sbjct: 163 VRQICAVIL 171
>sp|O00425|IF2B3_HUMAN Insulin-like growth factor 2 mRNA-binding protein 3 OS=Homo sapiens
GN=IGF2BP3 PE=1 SV=2
Length = 579
Score = 55.8 bits (133), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 83/154 (53%), Gaps = 15/154 (9%)
Query: 61 VGSLIGKGGSIVRTFQNETGASIKIADI-LPDSEERIVVISARENSEMRHSPAQDAVMRV 119
VG++IGK G ++ GASIKIA PD++ R+V+I+ ++ + A R+
Sbjct: 417 VGAIIGKQGQHIKQLSRFAGASIKIAPAEAPDAKVRMVIITGPPEAQFK------AQGRI 470
Query: 120 HSRIAEIGF-EPGQAVV--ARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAP 176
+ +I E F P + V A + V S G ++G+GG V+E++ + A + V P+DQ P
Sbjct: 471 YGKIKEENFVSPKEEVKLEAHIRVPSFAAGRVIGKGGKTVNELQNLSSAEV-VVPRDQTP 529
Query: 177 RCGSPHDE-IVQVIGNYHSVQDALFHITSRLRET 209
+D+ +V++ G++++ Q A I L +
Sbjct: 530 ---DENDQVVVKITGHFYACQVAQRKIQEILTQV 560
Score = 51.2 bits (121), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 89/196 (45%), Gaps = 21/196 (10%)
Query: 52 FKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKI--ADILPDSEERIVVISARENSEMRH 109
+LL VG++IGK G+ +R +T + I + + +E+ I ++S E +
Sbjct: 198 LRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKSITILSTPEGT---- 253
Query: 110 SPAQDAVMRV-HSRIAEIGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIR 168
S A +++ + H +I F + + ++L H+ +G L+G+ G + ++ + T I
Sbjct: 254 SAACKSILEIMHKEAQDIKF--TEEIPLKILAHNNFVGRLIGKEGRNLKKIEQDTDTKIT 311
Query: 169 VFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRET----IFPMKR-----PGPN 219
+ P Q +P + + V GN + A I ++RE+ I M PG N
Sbjct: 312 ISPL-QELTLYNP-ERTITVKGNVETCAKAEEEIMKKIRESYENDIASMNLQAHLIPGLN 369
Query: 220 -NGHSYLPPFPEMPPP 234
N PP MPPP
Sbjct: 370 LNALGLFPPTSGMPPP 385
Score = 37.7 bits (86), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 37/173 (21%), Positives = 70/173 (40%), Gaps = 45/173 (26%)
Query: 46 YEEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIA---DILPDSEERIVVIS-- 100
+ EE+ K+L H + VG LIGK G ++ + +T I I+ ++ + ER + +
Sbjct: 273 FTEEIPLKILAHNNFVGRLIGKEGRNLKKIEQDTDTKITISPLQELTLYNPERTITVKGN 332
Query: 101 ----ARENSE----MRHSPAQD-AVMRVHS------RIAEIG------------------ 127
A+ E +R S D A M + + + +G
Sbjct: 333 VETCAKAEEEIMKKIRESYENDIASMNLQAHLIPGLNLNALGLFPPTSGMPPPTSGPPSA 392
Query: 128 -------FEPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKD 173
FE + L + + +G ++G+ G + ++ R GASI++ P +
Sbjct: 393 MTPPYPQFEQSETETVHLFIPALSVGAIIGKQGQHIKQLSRFAGASIKIAPAE 445
>sp|Q0VCU0|PCBP4_BOVIN Poly(rC)-binding protein 4 OS=Bos taurus GN=PCBP4 PE=2 SV=1
Length = 403
Score = 55.8 bits (133), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 91/214 (42%), Gaps = 61/214 (28%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIA-DILPDSEERIVVISA------- 101
V +L+ + GSLIGK G+ ++ + TGA +++A D+LP+S ER V +S
Sbjct: 102 VTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQVAGDLLPNSTERAVTVSGVPDAIIL 161
Query: 102 ---RENSEMRHSPAQDAVMRVHSRI------------------------AEI-------- 126
+ + + SP + A + H + AE+
Sbjct: 162 CVRQICAVILESPPKGATIPYHPSLSLGTVLLSTNQGFSVQGQYGTVTPAEVTKLQQLSG 221
Query: 127 ------------GFEPG-QAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKD 173
G +P Q LV + IGC++GR G +SE+R+ +GA I++ +
Sbjct: 222 HAVPFASPSMVPGLDPSTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKI--GN 279
Query: 174 QAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLR 207
QA G H V + G+ S+ A + IT+ L
Sbjct: 280 QAEGAGERH---VTITGSPVSIALAQYLITACLE 310
Score = 49.7 bits (117), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 62/124 (50%), Gaps = 8/124 (6%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMRH 109
+ ++L H +VGS+IGK G V+ + ++ A I I++ ERI I+ + + H
Sbjct: 18 LTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISE--GSCPERITTITG-STAAVFH 74
Query: 110 SPAQDAVMRVHSRIAEIGFEPGQA----VVARLLVHSQQIGCLLGRGGHIVSEMRRATGA 165
+ + A ++ + G V RL++ + Q G L+G+ G + E+R TGA
Sbjct: 75 AVSMIA-FKLDEDLCAAPANGGNVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRETTGA 133
Query: 166 SIRV 169
++V
Sbjct: 134 QVQV 137
Score = 40.8 bits (94), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 36/65 (55%)
Query: 354 EVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATEGVVMVSGTSDQMRAAQSL 413
E ++P + V G S +S IRQ+SGA++ + + GA E V ++G+ + AQ L
Sbjct: 245 EFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQAEGAGERHVTITGSPVSIALAQYL 304
Query: 414 IHAFI 418
I A +
Sbjct: 305 ITACL 309
Score = 38.9 bits (89), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 34/69 (49%), Gaps = 1/69 (1%)
Query: 352 TIEVVIPQLYMAHVYGENNSNLSHIRQISGANV-VVNDPKPGATEGVVMVSGTSDQMRAA 410
T+ +VIP + G+ + + IR+ +GA V V D P +TE V VSG D +
Sbjct: 103 TLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQVAGDLLPNSTERAVTVSGVPDAIILC 162
Query: 411 QSLIHAFIL 419
I A IL
Sbjct: 163 VRQICAVIL 171
>sp|P57724|PCBP4_MOUSE Poly(rC)-binding protein 4 OS=Mus musculus GN=Pcbp4 PE=2 SV=1
Length = 403
Score = 55.1 bits (131), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 91/214 (42%), Gaps = 61/214 (28%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIA-DILPDSEERIVVISA------- 101
V +L+ + GSLIGK G+ ++ + TGA +++A D+LP+S ER V +S
Sbjct: 102 VTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQVAGDLLPNSTERAVTVSGVPDAIIL 161
Query: 102 ---RENSEMRHSPAQDAVMRVHSRI------------------------AEI-------- 126
+ + + SP + A + H + AE+
Sbjct: 162 CVRQICAVILESPPKGATIPYHPSLSLGTVLLSANQGFSVQGQYGAVTPAEVTKLQQLSG 221
Query: 127 ------------GFEPG-QAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKD 173
G +P Q LV + IGC++GR G +SE+R+ +GA I++ +
Sbjct: 222 HAVPFASPSVVPGMDPSTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKI--GN 279
Query: 174 QAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLR 207
QA G H V + G+ S+ A + IT+ L
Sbjct: 280 QAEGAGERH---VTITGSPVSIALAQYLITACLE 310
Score = 49.7 bits (117), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 62/124 (50%), Gaps = 8/124 (6%)
Query: 50 VVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMRH 109
+ ++L H +VGS+IGK G V+ + ++ A I I++ ERI I+ + + H
Sbjct: 18 LTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISE--GSCPERITTITG-STAAVFH 74
Query: 110 SPAQDAVMRVHSRIAEIGFEPGQA----VVARLLVHSQQIGCLLGRGGHIVSEMRRATGA 165
+ + A ++ + G V RL++ + Q G L+G+ G + E+R TGA
Sbjct: 75 AVSMIA-FKLDEDLCAAPANGGSVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRETTGA 133
Query: 166 SIRV 169
++V
Sbjct: 134 QVQV 137
Score = 40.8 bits (94), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 36/65 (55%)
Query: 354 EVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATEGVVMVSGTSDQMRAAQSL 413
E ++P + V G S +S IRQ+SGA++ + + GA E V ++G+ + AQ L
Sbjct: 245 EFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQAEGAGERHVTITGSPVSIALAQYL 304
Query: 414 IHAFI 418
I A +
Sbjct: 305 ITACL 309
Score = 38.9 bits (89), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 34/69 (49%), Gaps = 1/69 (1%)
Query: 352 TIEVVIPQLYMAHVYGENNSNLSHIRQISGANV-VVNDPKPGATEGVVMVSGTSDQMRAA 410
T+ +VIP + G+ + + IR+ +GA V V D P +TE V VSG D +
Sbjct: 103 TLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQVAGDLLPNSTERAVTVSGVPDAIILC 162
Query: 411 QSLIHAFIL 419
I A IL
Sbjct: 163 VRQICAVIL 171
Score = 35.0 bits (79), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 45/99 (45%), Gaps = 11/99 (11%)
Query: 125 EIGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAPRCGSPHDE 184
E G E + R+L+H +++G ++G+ G V +R + A I + GS +
Sbjct: 9 EEGPELSITLTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISE-------GSCPER 61
Query: 185 IVQVIGNYHSVQDALFHITSRLRETIFPMKRPGPNNGHS 223
I + G+ +V A+ I +L E + P NG S
Sbjct: 62 ITTITGSTAAVFHAVSMIAFKLDEDLC----AAPANGGS 96
>sp|Q9PW80|IF2B3_DANRE Insulin-like growth factor 2 mRNA-binding protein 3 OS=Danio rerio
GN=igf2bp3 PE=1 SV=1
Length = 582
Score = 55.1 bits (131), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 108/213 (50%), Gaps = 36/213 (16%)
Query: 19 GYAPGYHSRGYS----SGP------GHETVGGRNRMFYEEEVVFKLLCHLDKVGSLIGKG 68
G PG S G S SGP G+++ G + E E V + L VG++IGK
Sbjct: 373 GLFPGAASGGISPSVVSGPPPGAQAGYQSFGAQ----MESETVHLFIPAL-AVGAIIGKQ 427
Query: 69 GSIVRTFQNETGASIKI--ADILPDSEERIVVISARENSEMRHSPAQDAVMRVHSRIAEI 126
G ++ GASIKI AD + D+++R+V+IS ++ + A R+ ++ E
Sbjct: 428 GQHIKQLSRFAGASIKIAPADGI-DAKQRMVIISGPPEAQFK------AQGRIFGKLKEE 480
Query: 127 GF---EPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAPRCGSPHD 183
F + + A + V S G ++G+GG V+E++ T A + V P+DQ P +D
Sbjct: 481 NFFGPKEEVKLEAHIKVPSFAAGRVIGKGGKTVNELQNLTSAEV-VVPRDQTP---DEND 536
Query: 184 E-IVQVIGNYHSVQDALFHITSRLRETIFPMKR 215
+ +V++ G++++ Q A +++E I ++R
Sbjct: 537 QVVVKITGHFYASQLA----QRKIQEIISQVRR 565
Score = 42.0 bits (97), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 88/201 (43%), Gaps = 28/201 (13%)
Query: 27 RGYS-SGP---GHETVGGRNRMFYEEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGAS 82
RG++ GP G ++G R ++ + +V +LL VG++IGK G+ +R +T +
Sbjct: 170 RGFNPRGPPRQGSPSLGARPKL--QSDVPLRLLVPTQFVGAIIGKEGATIRNITKQTHSK 227
Query: 83 IKI--ADILPDSEERIVVISARENSEMRHSPAQDAVMRVHSRIAEIGFEPGQAVVARLLV 140
I I + +E+ I V S E S A +M + + A I + + + ++L
Sbjct: 228 IDIHRKENAGAAEKPITVHSTPEGC----SSACRNIMEIMQKEA-IDTKITEEIPLKILA 282
Query: 141 HSQQIGCLLGRGGHIVSEMRRATGASIRVFP---------------KDQAPRCGSPHDEI 185
H+ +G L+G+ G + ++ + T I + P K C +EI
Sbjct: 283 HNNFVGRLIGKEGRNLKKIEQDTDTKITISPLQDLTLYNPERTITVKGTLDACAKAEEEI 342
Query: 186 VQVIGNYHSVQDALFHITSRL 206
++ + + A H+ S L
Sbjct: 343 MKKVRESYENDVAAMHLQSNL 363
>sp|P38151|PBP2_YEAST PAB1-binding protein 2 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=PBP2 PE=1 SV=1
Length = 413
Score = 55.1 bits (131), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 76/375 (20%), Positives = 151/375 (40%), Gaps = 55/375 (14%)
Query: 49 EVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSEMR 108
+V ++LC + ++G G+ + ++ET A I I++ + ERIV + +
Sbjct: 66 DVHLRMLCLVKHASLIVGHKGATISRIKSETSARINISNNIRGVPERIVYVRGTCD---- 121
Query: 109 HSPAQDAVMRVHSRIAEIGFEPG---QAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGA 165
A+ M V + + E G E + LL+ +GC++G+ G + E+ + A
Sbjct: 122 -DVAKAYGMIVRALLEEHGNEDNGEDIEISINLLIPHHLMGCIIGKRGSRLREIEDLSAA 180
Query: 166 SIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKRPGPNNGHSYL 225
+ P + +D I+ + G ++ A F+I+ L F M+ P N S
Sbjct: 181 KLFASPN----QLLLSNDRILTINGVPDAIHIATFYISQTLLN--FQMESPQKNVKRSIY 234
Query: 226 PPFPEMPPPPFRPRHNPASPGSYPSPVGPFHSMDRGMGPSQPFDHQAAFSHGMDPMVPPN 285
++P + + P FH + PS S+ + +P +
Sbjct: 235 ----------YQPTQFNSVLIDHSQPNTIFHQRNHQYHPSDKL-----LSYKPNKNLPIS 279
Query: 286 SDRIPFP---YGSERPGHGPTFDRPPSPRSWTPQGVGGGDPRGFDASSGFTPRNRPVES- 341
S + Y + + F P P T + PV S
Sbjct: 280 STLLSMATPQYTTASVANATAF----QPNFVIP---------------NVTVLDGPVISP 320
Query: 342 --GNHAAILTSTTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATEGVVM 399
GNH ++ E+ I + ++ +V G++ +++ +++ +G ++++ DP G++E +
Sbjct: 321 APGNH-LLMNFVQQEIFIDEKFVGNVIGKDGKHINSVKESTGCSIIIQDPVEGSSERRLT 379
Query: 400 VSGTSDQMRAAQSLI 414
+ GT +AA LI
Sbjct: 380 IRGTFMASQAAIMLI 394
>sp|O57526|IF23B_XENLA Insulin-like growth factor 2 mRNA-binding protein 3-B OS=Xenopus
laevis GN=igf2bp3-b PE=1 SV=1
Length = 593
Score = 54.7 bits (130), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 81/151 (53%), Gaps = 15/151 (9%)
Query: 61 VGSLIGKGGSIVRTFQNETGASIKIADIL-PDSEERIVVISARENSEMRHSPAQDAVMRV 119
VG++IGK G ++ GASIKIA PD++ R+V+I+ ++ + A R+
Sbjct: 429 VGAIIGKQGQHIKQLSRFAGASIKIAPAEGPDAKLRMVIITGPPEAQFK------AQGRI 482
Query: 120 HSRIAEIGF---EPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAP 176
+ ++ E F + + A + V S G ++G+GG V+E++ T A + V P+DQ P
Sbjct: 483 YGKLKEENFFGPKEEVKLEAHIKVPSYAAGRVIGKGGKTVNELQNLTSAEV-VVPRDQTP 541
Query: 177 RCGSPHDE-IVQVIGNYHSVQDALFHITSRL 206
+D+ +V++ G++++ Q A I L
Sbjct: 542 ---DENDQVVVKITGHFYASQLAQRKIQEIL 569
Score = 38.5 bits (88), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 37/165 (22%), Positives = 77/165 (46%), Gaps = 9/165 (5%)
Query: 47 EEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKI--ADILPDSEERIVVISAREN 104
+ EV ++L VG++IGK G+ +R +T + I I + +E+ I + S E
Sbjct: 202 QSEVPLRMLVPTQFVGAIIGKEGATIRNITKQTQSKIDIHRKENAGAAEKPITIHSTPEG 261
Query: 105 SEMRHSPAQDAVMRVHSRIAEIGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATG 164
S A +M + + A+ + + + ++L H+ +G L+G+ G + ++ + T
Sbjct: 262 C----SAACKIIMEIMQKEAQ-DTKFTEEIPLKILAHNNFVGRLIGKEGRNLKKIEQDTD 316
Query: 165 ASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRET 209
I + P Q +P + + V G+ + A + ++RE+
Sbjct: 317 TKITISPL-QDLTLYNP-ERTITVKGSIETCAKAEEEVMKKIRES 359
Score = 34.7 bits (78), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 38/177 (21%), Positives = 69/177 (38%), Gaps = 50/177 (28%)
Query: 46 YEEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIA---DILPDSEERIVVIS-- 100
+ EE+ K+L H + VG LIGK G ++ + +T I I+ D+ + ER + +
Sbjct: 282 FTEEIPLKILAHNNFVGRLIGKEGRNLKKIEQDTDTKITISPLQDLTLYNPERTITVKGS 341
Query: 101 ----ARENSE----MRHSPAQD-AVMRVHSRIA--------------------------- 124
A+ E +R S D A M + + +
Sbjct: 342 IETCAKAEEEVMKKIRESYENDIAAMNLQAHLIPGLNLNALGLFPPSSSGMPPPSAGVSS 401
Query: 125 --------EIGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKD 173
G +P V L + + +G ++G+ G + ++ R GASI++ P +
Sbjct: 402 PTTSASYPPFGQQPESETV-HLFIPALAVGAIIGKQGQHIKQLSRFAGASIKIAPAE 457
>sp|Q9CPN8|IF2B3_MOUSE Insulin-like growth factor 2 mRNA-binding protein 3 OS=Mus musculus
GN=Igf2bp3 PE=1 SV=1
Length = 579
Score = 54.7 bits (130), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 83/154 (53%), Gaps = 15/154 (9%)
Query: 61 VGSLIGKGGSIVRTFQNETGASIKIADI-LPDSEERIVVISARENSEMRHSPAQDAVMRV 119
VG++IGK G ++ GASIKIA PD++ R+V+I+ ++ + A R+
Sbjct: 417 VGAIIGKQGQHIKQLSRFAGASIKIAPAEAPDAKVRMVIITGPPEAQFK------AQGRI 470
Query: 120 HSRIAEIGF-EPGQAVV--ARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAP 176
+ +I E F P + V A + V S G ++G+GG V+E++ + A + V P+DQ P
Sbjct: 471 YGKIKEENFVSPKEEVKLEAHIRVPSFAAGRVIGKGGKTVNELQSLSSAEV-VVPRDQTP 529
Query: 177 RCGSPHDE-IVQVIGNYHSVQDALFHITSRLRET 209
+D+ +V++ G++++ Q A I L +
Sbjct: 530 ---DENDQVVVKITGHFYACQVAQRKIQEILTQV 560
Score = 43.9 bits (102), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/161 (22%), Positives = 77/161 (47%), Gaps = 11/161 (6%)
Query: 52 FKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKI--ADILPDSEERIVVISARENSEMRH 109
+LL VG++IGK G+ +R +T + I + + +E+ I ++S E +
Sbjct: 198 LRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHRKENTGAAEKSITILSTPEGT---- 253
Query: 110 SPAQDAVMRV-HSRIAEIGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIR 168
S A +++ + H +I F + + ++L H+ +G L+G+ G + ++ + T I
Sbjct: 254 SAACKSILEIMHKEAQDIKF--TEEIPLKILAHNNFVGRLIGKEGRNLKKIEQDTDTKIT 311
Query: 169 VFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRET 209
+ P Q +P + + V G+ + A I ++RE+
Sbjct: 312 ISPL-QELTLYNP-ERTITVKGSVETCAKAEEEIMKKIRES 350
Score = 37.7 bits (86), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 38/173 (21%), Positives = 69/173 (39%), Gaps = 45/173 (26%)
Query: 46 YEEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADI----LPDSEERIVVISA 101
+ EE+ K+L H + VG LIGK G ++ + +T I I+ + L + E I V +
Sbjct: 273 FTEEIPLKILAHNNFVGRLIGKEGRNLKKIEQDTDTKITISPLQELTLYNPERTITVKGS 332
Query: 102 REN---------SEMRHSPAQD-AVMRVHS------RIAEIG------------------ 127
E ++R S D A M + + + +G
Sbjct: 333 VETCAKAEEEIMKKIRESYENDIASMNLQAHLIPGLNLNALGLFPPTSGMPPPTSGPPST 392
Query: 128 -------FEPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKD 173
FE + L + + +G ++G+ G + ++ R GASI++ P +
Sbjct: 393 LTPPYPQFEQSETETVHLFIPALSVGAIIGKQGQHIKQLSRFAGASIKIAPAE 445
>sp|Q5ZLP8|IF2B3_CHICK Insulin-like growth factor 2 mRNA-binding protein 3 OS=Gallus
gallus GN=IGF2BP3 PE=2 SV=1
Length = 584
Score = 54.7 bits (130), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 81/151 (53%), Gaps = 15/151 (9%)
Query: 61 VGSLIGKGGSIVRTFQNETGASIKIADIL-PDSEERIVVISARENSEMRHSPAQDAVMRV 119
VG++IGK G ++ GASIKIA PD++ R+V+I+ ++ + A R+
Sbjct: 421 VGAIIGKQGQHIKQLSRFAGASIKIAPAEGPDAKLRMVIITGPPEAQFK------AQGRI 474
Query: 120 HSRIAEIGF---EPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAP 176
+ ++ E F + + A + V S G ++G+GG V+E++ T A + V P+DQ P
Sbjct: 475 YGKLKEENFFGPKEEVKLEAHIKVPSYAAGRVIGKGGKTVNELQNLTSAEV-VVPRDQTP 533
Query: 177 RCGSPHDE-IVQVIGNYHSVQDALFHITSRL 206
+D+ +V++ G++++ Q A I L
Sbjct: 534 ---DENDQVVVKITGHFYACQLAQRKIQEIL 561
Score = 36.6 bits (83), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 37/165 (22%), Positives = 77/165 (46%), Gaps = 9/165 (5%)
Query: 47 EEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKI--ADILPDSEERIVVISAREN 104
+ +V ++L VG++IGK G+ +R +T + I I + +E+ I + S E
Sbjct: 194 QSDVPLRMLVPTQFVGAIIGKEGATIRNITKQTQSKIDIHRKENAGAAEKPITIHSTPEG 253
Query: 105 SEMRHSPAQDAVMRVHSRIAEIGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATG 164
S A +M + + A+ + + + ++L H+ +G L+G+ G + ++ + T
Sbjct: 254 C----STACKIIMEIMQKEAQ-DTKFTEEIPLKILAHNNFVGRLIGKEGRNLKKIEQDTD 308
Query: 165 ASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRET 209
I + P Q +P + + V G+ + A I ++RE+
Sbjct: 309 TKITISPL-QDLTLYNP-ERTITVKGSIETCAKAEEEIMKKIRES 351
Score = 35.0 bits (79), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 38/177 (21%), Positives = 69/177 (38%), Gaps = 50/177 (28%)
Query: 46 YEEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIA---DILPDSEERIVVIS-- 100
+ EE+ K+L H + VG LIGK G ++ + +T I I+ D+ + ER + +
Sbjct: 274 FTEEIPLKILAHNNFVGRLIGKEGRNLKKIEQDTDTKITISPLQDLTLYNPERTITVKGS 333
Query: 101 ----ARENSE----MRHSPAQD-AVMRVHSRI---------------------------- 123
A+ E +R S D A M + + +
Sbjct: 334 IETCAKAEEEIMKKIRESYENDIAAMNLQAHLIPGLNLNALGLFPPSSSGIPPPAVSVAS 393
Query: 124 -------AEIGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKD 173
G +P V L + + +G ++G+ G + ++ R GASI++ P +
Sbjct: 394 AAAAASYPPFGQQPESETV-HLFIPALAVGAIIGKQGQHIKQLSRFAGASIKIAPAE 449
>sp|O73932|IF23A_XENLA Insulin-like growth factor 2 mRNA-binding protein 3-A OS=Xenopus
laevis GN=igf2bp3-a PE=1 SV=1
Length = 594
Score = 54.3 bits (129), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 82/153 (53%), Gaps = 19/153 (12%)
Query: 61 VGSLIGKGGSIVRTFQNETGASIKIADIL-PDSEERIVVISARENSEMRHSPAQDAVMRV 119
VG++IGK G ++ GASIKIA PD++ R+V+I+ ++ + A R+
Sbjct: 430 VGAIIGKQGQHIKQLSRFAGASIKIAPAEGPDAKLRMVIITGPPEAQFK------AQGRI 483
Query: 120 HSRIAEIG-FEPGQAVVARLLVH----SQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQ 174
+ ++ E F P + V +L H S G ++G+GG V+E++ T A + V P+DQ
Sbjct: 484 YGKLKEENFFGPKEEV--KLETHIKVPSYAAGRVIGKGGKTVNELQNLTSAEV-VVPRDQ 540
Query: 175 APRCGSPHDE-IVQVIGNYHSVQDALFHITSRL 206
P +DE +V++ G++++ Q A I L
Sbjct: 541 TP---DENDEVVVKITGHFYASQLAQRKIQEIL 570
Score = 37.4 bits (85), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 38/165 (23%), Positives = 76/165 (46%), Gaps = 9/165 (5%)
Query: 47 EEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKI--ADILPDSEERIVVISAREN 104
+ EV ++L VG++IGK G+ +R +T + I I + +E+ I + S E
Sbjct: 203 QTEVPLRMLVPTQFVGAIIGKEGATIRNITKQTQSKIDIHRKENAGAAEKPITIHSTPEG 262
Query: 105 SEMRHSPAQDAVMRVHSRIAEIGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATG 164
S A +M + + A+ + + + ++L H+ +G L+G+ G + ++ + T
Sbjct: 263 C----SAACKIIMEIMQKEAQ-DTKFTEEIPLKILAHNNFVGRLIGKEGRNLKKIEQDTD 317
Query: 165 ASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRET 209
I + P Q +P + + V G+ A I ++RE+
Sbjct: 318 TKITISPL-QDLTLYNP-ERTITVKGSIEPCAKAEEEIMKKIRES 360
Score = 34.7 bits (78), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 38/177 (21%), Positives = 69/177 (38%), Gaps = 50/177 (28%)
Query: 46 YEEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIA---DILPDSEERIVVIS-- 100
+ EE+ K+L H + VG LIGK G ++ + +T I I+ D+ + ER + +
Sbjct: 283 FTEEIPLKILAHNNFVGRLIGKEGRNLKKIEQDTDTKITISPLQDLTLYNPERTITVKGS 342
Query: 101 ----ARENSE----MRHSPAQD-AVMRVHSRIA--------------------------- 124
A+ E +R S D A M + + +
Sbjct: 343 IEPCAKAEEEIMKKIRESYENDIAAMNLQAHLIPGLNLNALGLFPSSSSGMPPPSVGVPS 402
Query: 125 --------EIGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKD 173
G +P V L + + +G ++G+ G + ++ R GASI++ P +
Sbjct: 403 PTSSTSYPPFGQQPESETV-HLFIPALAVGAIIGKQGQHIKQLSRFAGASIKIAPAE 458
>sp|O42254|IF2B1_CHICK Insulin-like growth factor 2 mRNA-binding protein 1 OS=Gallus
gallus GN=IGF2BP1 PE=1 SV=1
Length = 576
Score = 54.3 bits (129), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 85/161 (52%), Gaps = 21/161 (13%)
Query: 61 VGSLIGKGGSIVRTFQNETGASIKIA-DILPDSEERIVVISARENSEMRHSPAQDAVMRV 119
VG++IGK G ++ ASIKIA PDS+ R+VVI+ ++ + A R+
Sbjct: 416 VGAIIGKKGQHIKQLSRFASASIKIAPPETPDSKVRMVVITGPPEAQFK------AQGRI 469
Query: 120 HSRIAEIG-FEPGQAVVARLLVH----SQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQ 174
+ ++ E F P + V +L H + G ++G+GG V+E++ T A + V P+DQ
Sbjct: 470 YGKLKEENFFGPKEEV--KLETHIRVPASAAGRVIGKGGKTVNELQNLTAAEV-VVPRDQ 526
Query: 175 APRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKR 215
P IV++IG++++ Q A ++R+ + +K+
Sbjct: 527 TP--DENEQVIVKIIGHFYASQMA----QRKIRDILAQVKQ 561
Score = 38.9 bits (89), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 39/168 (23%), Positives = 69/168 (41%), Gaps = 44/168 (26%)
Query: 48 EEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADI----LPDSEERIVVISARE 103
+EV K+L H + VG LIGK G ++ + +T I I+ + L + E I V + E
Sbjct: 275 DEVPLKILAHNNFVGRLIGKEGRNLKKVEQDTETKITISSLQDLTLYNPERTITVKGSIE 334
Query: 104 N---------SEMRHSPAQD-AVMRVHS------RIAEIG-------------------- 127
N ++R + D A M + S +A +G
Sbjct: 335 NCCKAEQEIMKKVREAYENDVAAMSLQSHLIPGLNLAAVGLFPASSNAVPPPPSSVSGAA 394
Query: 128 ----FEPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFP 171
F P + + + +Q +G ++G+ G + ++ R ASI++ P
Sbjct: 395 PYSSFMPPEQETVHVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAP 442
Score = 33.5 bits (75), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 30/57 (52%), Gaps = 7/57 (12%)
Query: 47 EEEVVFKLLCHL----DKVGSLIGKGGSIVRTFQNETGASIKI-ADILPDSEERIVV 98
+EEV KL H+ G +IGKGG V QN T A + + D PD E+++V
Sbjct: 482 KEEV--KLETHIRVPASAAGRVIGKGGKTVNELQNLTAAEVVVPRDQTPDENEQVIV 536
Score = 33.1 bits (74), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 27/120 (22%), Positives = 56/120 (46%), Gaps = 7/120 (5%)
Query: 52 FKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKI--ADILPDSEERIVVISARENSEMRH 109
+LL VG++IGK G+ +R +T + I + + +E+ I + S E
Sbjct: 198 LRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKAISIHSTPEGC---- 253
Query: 110 SPAQDAVMRVHSRIAEIGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRV 169
S A ++ + + A+ + V ++L H+ +G L+G+ G + ++ + T I +
Sbjct: 254 SAACKMILEIMQKEAK-DTKTADEVPLKILAHNNFVGRLIGKEGRNLKKVEQDTETKITI 312
>sp|O88477|IF2B1_MOUSE Insulin-like growth factor 2 mRNA-binding protein 1 OS=Mus musculus
GN=Igf2bp1 PE=1 SV=1
Length = 577
Score = 53.5 bits (127), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 88/162 (54%), Gaps = 23/162 (14%)
Query: 61 VGSLIGKGGSIVRTFQNETGASIKIA-DILPDSEERIVVISARENSEMRHSPAQDAVMRV 119
VG++IGK G ++ ASIKIA PDS+ R+VVI+ ++ + A R+
Sbjct: 417 VGAIIGKKGQHIKQLSRFASASIKIAPPETPDSKVRMVVITGPPEAQFK------AQGRI 470
Query: 120 HSRIAEIG-FEPGQAVVARLLVH----SQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQ 174
+ ++ E F P + V +L H + G ++G+GG V+E++ T A + V P+DQ
Sbjct: 471 YGKLKEENFFGPKEEV--KLETHIRVPASAAGRVIGKGGKTVNELQNLTAAEV-VVPRDQ 527
Query: 175 APRCGSPHDE-IVQVIGNYHSVQDALFHITSRLRETIFPMKR 215
P +D+ IV++IG++++ Q A ++R+ + +K+
Sbjct: 528 TP---DENDQVIVKIIGHFYASQMA----QRKIRDILAQVKQ 562
Score = 38.5 bits (88), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 71/170 (41%), Gaps = 47/170 (27%)
Query: 48 EEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADI----LPDSEERIVVISARE 103
+EV K+L H + VG LIGK G ++ + +T I I+ + L + E I V A E
Sbjct: 275 DEVPLKILAHNNFVGRLIGKEGRNLKKVEQDTETKITISSLQDLTLYNPERTITVKGAIE 334
Query: 104 N---------SEMRHSPAQD-AVMRVHS------RIAEIGF------------------- 128
N ++R + D A M + S +A +G
Sbjct: 335 NCCRAEQEIMKKVREAYENDVAAMSLQSHLIPGLNLAAVGLFPASSSAVPPPPSSVTGAA 394
Query: 129 -------EPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFP 171
P Q +V ++ + +Q +G ++G+ G + ++ R ASI++ P
Sbjct: 395 PYSSFMQAPEQEMV-QVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAP 443
Score = 32.0 bits (71), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 28/120 (23%), Positives = 56/120 (46%), Gaps = 7/120 (5%)
Query: 52 FKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKI--ADILPDSEERIVVISARENSEMRH 109
+LL VG++IGK G+ +R +T + I + + +E+ I V S E
Sbjct: 198 LRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKAISVHSTPEGC---- 253
Query: 110 SPAQDAVMRVHSRIAEIGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRV 169
S A ++ + + A+ + V ++L H+ +G L+G+ G + ++ + T I +
Sbjct: 254 SSACKMILEIMHKEAK-DTKTADEVPLKILAHNNFVGRLIGKEGRNLKKVEQDTETKITI 312
>sp|Q8CGX0|IF2B1_RAT Insulin-like growth factor 2 mRNA-binding protein 1 OS=Rattus
norvegicus GN=Igf2bp1 PE=1 SV=1
Length = 577
Score = 53.5 bits (127), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 88/162 (54%), Gaps = 23/162 (14%)
Query: 61 VGSLIGKGGSIVRTFQNETGASIKIA-DILPDSEERIVVISARENSEMRHSPAQDAVMRV 119
VG++IGK G ++ ASIKIA PDS+ R+VVI+ ++ + A R+
Sbjct: 417 VGAIIGKKGQHIKQLSRFASASIKIAPPETPDSKVRMVVITGPPEAQFK------AQGRI 470
Query: 120 HSRIAEIG-FEPGQAVVARLLVH----SQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQ 174
+ ++ E F P + V +L H + G ++G+GG V+E++ T A + V P+DQ
Sbjct: 471 YGKLKEENFFGPKEEV--KLETHIRVPASAAGRVIGKGGKTVNELQNLTAAEV-VVPRDQ 527
Query: 175 APRCGSPHDE-IVQVIGNYHSVQDALFHITSRLRETIFPMKR 215
P +D+ IV++IG++++ Q A ++R+ + +K+
Sbjct: 528 TP---DENDQVIVKIIGHFYASQMA----QRKIRDILAQVKQ 562
Score = 38.5 bits (88), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 71/170 (41%), Gaps = 47/170 (27%)
Query: 48 EEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADI----LPDSEERIVVISARE 103
+EV K+L H + VG LIGK G ++ + +T I I+ + L + E I V A E
Sbjct: 275 DEVPLKILAHNNFVGRLIGKEGRNLKKVEQDTETKITISSLQDLTLYNPERTITVKGAIE 334
Query: 104 N---------SEMRHSPAQD-AVMRVHS------RIAEIGF------------------- 128
N ++R + D A M + S +A +G
Sbjct: 335 NCCRAEQEIMKKVREAYENDVAAMSLQSHLIPGLNLAAVGLFPASSSAVPPPPSSVTGAA 394
Query: 129 -------EPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFP 171
P Q +V ++ + +Q +G ++G+ G + ++ R ASI++ P
Sbjct: 395 PYGSFMQAPEQEMV-QVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAP 443
>sp|Q9NZI8|IF2B1_HUMAN Insulin-like growth factor 2 mRNA-binding protein 1 OS=Homo sapiens
GN=IGF2BP1 PE=1 SV=2
Length = 577
Score = 52.8 bits (125), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 88/162 (54%), Gaps = 23/162 (14%)
Query: 61 VGSLIGKGGSIVRTFQNETGASIKIA-DILPDSEERIVVISARENSEMRHSPAQDAVMRV 119
VG++IGK G ++ ASIKIA PDS+ R+V+I+ ++ + A R+
Sbjct: 417 VGAIIGKKGQHIKQLSRFASASIKIAPPETPDSKVRMVIITGPPEAQFK------AQGRI 470
Query: 120 HSRIAEIG-FEPGQAVVARLLVH----SQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQ 174
+ ++ E F P + V +L H + G ++G+GG V+E++ T A + V P+DQ
Sbjct: 471 YGKLKEENFFGPKEEV--KLETHIRVPASAAGRVIGKGGKTVNELQNLTAAEV-VVPRDQ 527
Query: 175 APRCGSPHDE-IVQVIGNYHSVQDALFHITSRLRETIFPMKR 215
P +D+ IV++IG++++ Q A ++R+ + +K+
Sbjct: 528 TP---DENDQVIVKIIGHFYASQMA----QRKIRDILAQVKQ 562
Score = 38.5 bits (88), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 71/170 (41%), Gaps = 47/170 (27%)
Query: 48 EEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADI----LPDSEERIVVISARE 103
+EV K+L H + VG LIGK G ++ + +T I I+ + L + E I V A E
Sbjct: 275 DEVPLKILAHNNFVGRLIGKEGRNLKKVEQDTETKITISSLQDLTLYNPERTITVKGAIE 334
Query: 104 N---------SEMRHSPAQD-AVMRVHS------RIAEIGF------------------- 128
N ++R + D A M + S +A +G
Sbjct: 335 NCCRAEQEIMKKVREAYENDVAAMSLQSHLIPGLNLAAVGLFPASSSAVPPPPSSVTGAA 394
Query: 129 -------EPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFP 171
P Q +V ++ + +Q +G ++G+ G + ++ R ASI++ P
Sbjct: 395 PYSSFMQAPEQEMV-QVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAP 443
>sp|Q2PFW9|NOVA1_MACFA RNA-binding protein Nova-1 OS=Macaca fascicularis GN=NOVA1 PE=2
SV=1
Length = 483
Score = 51.2 bits (121), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 76/171 (44%), Gaps = 17/171 (9%)
Query: 52 FKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIA---DILPDSEERIVVISAR-ENSEM 107
K+L GS+IGKGG + Q ETGA+IK++ D P + ER+ +I E
Sbjct: 52 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTVEALNA 111
Query: 108 RHSPAQDAVMRVHSRIA----------EIGFEPGQAVVARLLVHSQQIGCLLGRGGHIVS 157
H + + + +A + P + +++V + G ++G+GG V
Sbjct: 112 VHGFIAEKIREMPQNVAKTEPVSILQPQTTVNPDRIKQVKIIVPNSTAGLIIGKGGATVK 171
Query: 158 EMRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRE 208
+ +GA +++ Q P + + +V V G + A+ I +++E
Sbjct: 172 AIMEQSGAWVQL---SQKPDGINLQERVVTVSGEPEQNRKAVELIIQKIQE 219
Score = 35.0 bits (79), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 43/92 (46%), Gaps = 14/92 (15%)
Query: 330 SGFTPRNRPVESGNHAAILTSTTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDP 389
+G T R E G + ++V+IP + G+ + +++ +GA + ++
Sbjct: 36 AGSTKRTNTGEDGQYF-------LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKS 88
Query: 390 K---PGATEGVVMVSGTSDQMRAAQSLIHAFI 418
K PG TE V ++ GT + + A +H FI
Sbjct: 89 KDFYPGTTERVCLIQGTVEALNA----VHGFI 116
Score = 33.1 bits (74), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 35/73 (47%), Gaps = 4/73 (5%)
Query: 135 VARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQ-APRCGSPHDEIVQVIGNYH 193
V + V +G +LG+GG + E + TGA I++ K + P + V + G
Sbjct: 399 VVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVP---GTRNRKVTITGTPA 455
Query: 194 SVQDALFHITSRL 206
+ Q A + IT R+
Sbjct: 456 ATQAAQYLITQRI 468
>sp|Q80WA4|NOVA1_RAT RNA-binding protein Nova-1 (Fragment) OS=Rattus norvegicus GN=Nova1
PE=2 SV=1
Length = 474
Score = 51.2 bits (121), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 76/171 (44%), Gaps = 17/171 (9%)
Query: 52 FKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIA---DILPDSEERIVVISAR-ENSEM 107
K+L GS+IGKGG + Q ETGA+IK++ D P + ER+ +I E
Sbjct: 51 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTIEALNA 110
Query: 108 RHSPAQDAVMRVHSRIA----------EIGFEPGQAVVARLLVHSQQIGCLLGRGGHIVS 157
H + + + +A + P + +++V + G ++G+GG V
Sbjct: 111 VHGFIAEKIREMPQNVAKTEPVSILQPQTTVNPDRIKQVKIIVPNSTAGLIIGKGGATVK 170
Query: 158 EMRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRE 208
+ +GA +++ Q P + + +V V G + A+ I +++E
Sbjct: 171 AIMEQSGAWVQL---SQKPDGINLQERVVTVSGEPEQNRKAVELIIQKIQE 218
Score = 35.0 bits (79), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 43/92 (46%), Gaps = 14/92 (15%)
Query: 330 SGFTPRNRPVESGNHAAILTSTTIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDP 389
+G T R E G + ++V+IP + G+ + +++ +GA + ++
Sbjct: 35 AGSTKRTNTGEDGQYF-------LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKS 87
Query: 390 K---PGATEGVVMVSGTSDQMRAAQSLIHAFI 418
K PG TE V ++ GT + + A +H FI
Sbjct: 88 KDFYPGTTERVCLIQGTIEALNA----VHGFI 115
Score = 33.1 bits (74), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 35/73 (47%), Gaps = 4/73 (5%)
Query: 135 VARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQ-APRCGSPHDEIVQVIGNYH 193
V + V +G +LG+GG + E + TGA I++ K + P + V + G
Sbjct: 398 VVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVP---GTRNRKVTITGTPA 454
Query: 194 SVQDALFHITSRL 206
+ Q A + IT R+
Sbjct: 455 ATQAAQYLITQRI 467
>sp|Q5ZIQ3|HNRPK_CHICK Heterogeneous nuclear ribonucleoprotein K OS=Gallus gallus
GN=HNRNPK PE=2 SV=1
Length = 427
Score = 48.5 bits (114), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 69/153 (45%), Gaps = 20/153 (13%)
Query: 47 EEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSE--ERIVVISAREN 104
+E V ++L G++IGKGG ++ + + AS+ + PDS ERI+ ISA
Sbjct: 37 DEMVELRILLQSKNAGAVIGKGGKNIKALRTDYNASVSV----PDSSGPERILSISADTE 92
Query: 105 SEMRHSPAQDAVMRVHSRIAEIGFEPGQAVVA--RLLVHSQQIGCLLGRGGHIVSEMRRA 162
+ + + ++ + E G RLL+H G ++G G + E+R
Sbjct: 93 T------IGEILKKIIPTLEEYQHYKGSDFDCELRLLIHQSLAGGIIGVKGAKIKELREN 146
Query: 163 TGASIRVFPK------DQAPRCGSPHDEIVQVI 189
T +I++F + D+ G D +V+ I
Sbjct: 147 TQTTIKLFQECCPHSTDRVVLIGGKPDRVVECI 179
Score = 47.8 bits (112), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 38/64 (59%)
Query: 352 TIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATEGVVMVSGTSDQMRAAQ 411
T +V IP+ + G+ + IR SGA++ +++P G+ + ++ ++GT DQ++ AQ
Sbjct: 353 TTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQDQIQNAQ 412
Query: 412 SLIH 415
L+
Sbjct: 413 YLLQ 416
Score = 45.4 bits (106), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 33/46 (71%)
Query: 59 DKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISAREN 104
D GS+IGKGG ++ ++E+GASIKI + L SE+RI+ I+ ++
Sbjct: 361 DLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQD 406
Score = 35.8 bits (81), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 18/78 (23%), Positives = 41/78 (52%), Gaps = 5/78 (6%)
Query: 131 GQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAPRCGSPHDEIVQVIG 190
G + ++ + G ++G+GG + ++R +GASI++ P GS D I+ + G
Sbjct: 349 GPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI----DEPLEGS-EDRIITITG 403
Query: 191 NYHSVQDALFHITSRLRE 208
+Q+A + + + +++
Sbjct: 404 TQDQIQNAQYLLQNSVKQ 421
>sp|O19049|HNRPK_RABIT Heterogeneous nuclear ribonucleoprotein K OS=Oryctolagus cuniculus
GN=HNRNPK PE=2 SV=1
Length = 463
Score = 48.1 bits (113), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 38/64 (59%)
Query: 352 TIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATEGVVMVSGTSDQMRAAQ 411
T +V IP+ + G+ + IR SGA++ +++P G+ + ++ ++GT DQ++ AQ
Sbjct: 389 TTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQDQIQNAQ 448
Query: 412 SLIH 415
L+
Sbjct: 449 YLLQ 452
Score = 45.4 bits (106), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 33/46 (71%)
Query: 59 DKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISAREN 104
D GS+IGKGG ++ ++E+GASIKI + L SE+RI+ I+ ++
Sbjct: 397 DLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQD 442
Score = 45.1 bits (105), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/173 (22%), Positives = 72/173 (41%), Gaps = 36/173 (20%)
Query: 47 EEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIAD------------------- 87
+E V ++L G++IGKGG ++ + + AS+ + D
Sbjct: 40 DEMVELRILLQSKNAGAVIGKGGKNIKALRTDYNASVSVPDSSGPERILSISADIETIGE 99
Query: 88 ----ILPDSEERIVVISARENSEM-RHSPAQDAVMRVHSRIAEIGFEPGQAVVARLLVHS 142
I+P EE + + S S++ S A + + H + ++ E RLL+H
Sbjct: 100 ILKKIIPTLEEGLQLPSPTATSQLPLESDAVECLNYQHFKGSDFDCE------LRLLIHQ 153
Query: 143 QQIGCLLGRGGHIVSEMRRATGASIRVFPK------DQAPRCGSPHDEIVQVI 189
G ++G G + E+R T +I++F + D+ G D +V+ I
Sbjct: 154 SLAGGIIGVKGAKIKELRENTQTTIKLFQECCPHSTDRVVLIGGKPDRVVECI 206
Score = 36.6 bits (83), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 18/78 (23%), Positives = 41/78 (52%), Gaps = 5/78 (6%)
Query: 131 GQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAPRCGSPHDEIVQVIG 190
G + ++ + G ++G+GG + ++R +GASI++ P GS D I+ + G
Sbjct: 385 GPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI----DEPLEGS-EDRIITITG 439
Query: 191 NYHSVQDALFHITSRLRE 208
+Q+A + + + +++
Sbjct: 440 TQDQIQNAQYLLQNSVKQ 457
>sp|P61980|HNRPK_RAT Heterogeneous nuclear ribonucleoprotein K OS=Rattus norvegicus
GN=Hnrnpk PE=1 SV=1
Length = 463
Score = 48.1 bits (113), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 38/64 (59%)
Query: 352 TIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATEGVVMVSGTSDQMRAAQ 411
T +V IP+ + G+ + IR SGA++ +++P G+ + ++ ++GT DQ++ AQ
Sbjct: 389 TTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQDQIQNAQ 448
Query: 412 SLIH 415
L+
Sbjct: 449 YLLQ 452
Score = 45.4 bits (106), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 39/173 (22%), Positives = 72/173 (41%), Gaps = 36/173 (20%)
Query: 47 EEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIAD------------------- 87
+E V ++L G++IGKGG ++ + + AS+ + D
Sbjct: 40 DEMVELRILLQSKNAGAVIGKGGKNIKALRTDYNASVSVPDSSGPERILSISADIETIGE 99
Query: 88 ----ILPDSEERIVVISARENSEM-RHSPAQDAVMRVHSRIAEIGFEPGQAVVARLLVHS 142
I+P EE + + S S++ S A + + H + ++ E RLL+H
Sbjct: 100 ILKKIIPTLEEGLQLPSPTATSQLPLESDAVECLNYQHYKGSDFDCE------LRLLIHQ 153
Query: 143 QQIGCLLGRGGHIVSEMRRATGASIRVFPK------DQAPRCGSPHDEIVQVI 189
G ++G G + E+R T +I++F + D+ G D +V+ I
Sbjct: 154 SLAGGIIGVKGAKIKELRENTQTTIKLFQECCPHSTDRVVLIGGKPDRVVECI 206
Score = 45.4 bits (106), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 33/46 (71%)
Query: 59 DKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISAREN 104
D GS+IGKGG ++ ++E+GASIKI + L SE+RI+ I+ ++
Sbjct: 397 DLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQD 442
Score = 36.6 bits (83), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 18/78 (23%), Positives = 41/78 (52%), Gaps = 5/78 (6%)
Query: 131 GQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAPRCGSPHDEIVQVIG 190
G + ++ + G ++G+GG + ++R +GASI++ P GS D I+ + G
Sbjct: 385 GPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI----DEPLEGS-EDRIITITG 439
Query: 191 NYHSVQDALFHITSRLRE 208
+Q+A + + + +++
Sbjct: 440 TQDQIQNAQYLLQNSVKQ 457
>sp|P61979|HNRPK_MOUSE Heterogeneous nuclear ribonucleoprotein K OS=Mus musculus GN=Hnrnpk
PE=1 SV=1
Length = 463
Score = 48.1 bits (113), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 38/64 (59%)
Query: 352 TIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATEGVVMVSGTSDQMRAAQ 411
T +V IP+ + G+ + IR SGA++ +++P G+ + ++ ++GT DQ++ AQ
Sbjct: 389 TTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQDQIQNAQ 448
Query: 412 SLIH 415
L+
Sbjct: 449 YLLQ 452
Score = 45.4 bits (106), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 39/173 (22%), Positives = 72/173 (41%), Gaps = 36/173 (20%)
Query: 47 EEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIAD------------------- 87
+E V ++L G++IGKGG ++ + + AS+ + D
Sbjct: 40 DEMVELRILLQSKNAGAVIGKGGKNIKALRTDYNASVSVPDSSGPERILSISADIETIGE 99
Query: 88 ----ILPDSEERIVVISARENSEM-RHSPAQDAVMRVHSRIAEIGFEPGQAVVARLLVHS 142
I+P EE + + S S++ S A + + H + ++ E RLL+H
Sbjct: 100 ILKKIIPTLEEGLQLPSPTATSQLPLESDAVECLNYQHYKGSDFDCE------LRLLIHQ 153
Query: 143 QQIGCLLGRGGHIVSEMRRATGASIRVFPK------DQAPRCGSPHDEIVQVI 189
G ++G G + E+R T +I++F + D+ G D +V+ I
Sbjct: 154 SLAGGIIGVKGAKIKELRENTQTTIKLFQECCPHSTDRVVLIGGKPDRVVECI 206
Score = 45.4 bits (106), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 33/46 (71%)
Query: 59 DKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISAREN 104
D GS+IGKGG ++ ++E+GASIKI + L SE+RI+ I+ ++
Sbjct: 397 DLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQD 442
Score = 36.6 bits (83), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 18/78 (23%), Positives = 41/78 (52%), Gaps = 5/78 (6%)
Query: 131 GQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAPRCGSPHDEIVQVIG 190
G + ++ + G ++G+GG + ++R +GASI++ P GS D I+ + G
Sbjct: 385 GPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI----DEPLEGS-EDRIITITG 439
Query: 191 NYHSVQDALFHITSRLRE 208
+Q+A + + + +++
Sbjct: 440 TQDQIQNAQYLLQNSVKQ 457
>sp|P61978|HNRPK_HUMAN Heterogeneous nuclear ribonucleoprotein K OS=Homo sapiens GN=HNRNPK
PE=1 SV=1
Length = 463
Score = 48.1 bits (113), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 38/64 (59%)
Query: 352 TIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATEGVVMVSGTSDQMRAAQ 411
T +V IP+ + G+ + IR SGA++ +++P G+ + ++ ++GT DQ++ AQ
Sbjct: 389 TTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQDQIQNAQ 448
Query: 412 SLIH 415
L+
Sbjct: 449 YLLQ 452
Score = 45.4 bits (106), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 39/173 (22%), Positives = 72/173 (41%), Gaps = 36/173 (20%)
Query: 47 EEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIAD------------------- 87
+E V ++L G++IGKGG ++ + + AS+ + D
Sbjct: 40 DEMVELRILLQSKNAGAVIGKGGKNIKALRTDYNASVSVPDSSGPERILSISADIETIGE 99
Query: 88 ----ILPDSEERIVVISARENSEM-RHSPAQDAVMRVHSRIAEIGFEPGQAVVARLLVHS 142
I+P EE + + S S++ S A + + H + ++ E RLL+H
Sbjct: 100 ILKKIIPTLEEGLQLPSPTATSQLPLESDAVECLNYQHYKGSDFDCE------LRLLIHQ 153
Query: 143 QQIGCLLGRGGHIVSEMRRATGASIRVFPK------DQAPRCGSPHDEIVQVI 189
G ++G G + E+R T +I++F + D+ G D +V+ I
Sbjct: 154 SLAGGIIGVKGAKIKELRENTQTTIKLFQECCPHSTDRVVLIGGKPDRVVECI 206
Score = 45.4 bits (106), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 33/46 (71%)
Query: 59 DKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISAREN 104
D GS+IGKGG ++ ++E+GASIKI + L SE+RI+ I+ ++
Sbjct: 397 DLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQD 442
Score = 36.6 bits (83), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 18/78 (23%), Positives = 41/78 (52%), Gaps = 5/78 (6%)
Query: 131 GQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAPRCGSPHDEIVQVIG 190
G + ++ + G ++G+GG + ++R +GASI++ P GS D I+ + G
Sbjct: 385 GPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI----DEPLEGS-EDRIITITG 439
Query: 191 NYHSVQDALFHITSRLRE 208
+Q+A + + + +++
Sbjct: 440 TQDQIQNAQYLLQNSVKQ 457
>sp|Q3T0D0|HNRPK_BOVIN Heterogeneous nuclear ribonucleoprotein K OS=Bos taurus GN=HNRNPK
PE=2 SV=1
Length = 464
Score = 48.1 bits (113), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 38/64 (59%)
Query: 352 TIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATEGVVMVSGTSDQMRAAQ 411
T +V IP+ + G+ + IR SGA++ +++P G+ + ++ ++GT DQ++ AQ
Sbjct: 389 TTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQDQIQNAQ 448
Query: 412 SLIH 415
L+
Sbjct: 449 YLLQ 452
Score = 45.4 bits (106), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 41/187 (21%), Positives = 77/187 (41%), Gaps = 34/187 (18%)
Query: 47 EEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIAD------------------- 87
+E V ++L G++IGKGG ++ + + AS+ + D
Sbjct: 40 DEMVELRILLQSKNAGAVIGKGGKNIKALRTDYNASVSVPDSSGPERILSISADIETIGE 99
Query: 88 ----ILPDSEERIVVISARENSEM-RHSPAQDAVMRVHSRIAEIGFEPGQAVVARLLVHS 142
I+P EE + + S S++ S A + + H + ++ E RLL+H
Sbjct: 100 ILKKIIPTLEEGLQLPSPTATSQLPLESDAVECLNYQHYKGSDFDCE------LRLLIHQ 153
Query: 143 QQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHI 202
G ++G G + E+R T +I++F + C D +V + G V + + I
Sbjct: 154 SLAGGIIGVKGAKIKELRENTQTTIKLFQE----CCPQSTDRVVLIGGKPDRVVECIKII 209
Query: 203 TSRLRET 209
+ E+
Sbjct: 210 LDLISES 216
Score = 45.4 bits (106), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 33/46 (71%)
Query: 59 DKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISAREN 104
D GS+IGKGG ++ ++E+GASIKI + L SE+RI+ I+ ++
Sbjct: 397 DLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQD 442
Score = 36.6 bits (83), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 18/78 (23%), Positives = 41/78 (52%), Gaps = 5/78 (6%)
Query: 131 GQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAPRCGSPHDEIVQVIG 190
G + ++ + G ++G+GG + ++R +GASI++ P GS D I+ + G
Sbjct: 385 GPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI----DEPLEGS-EDRIITITG 439
Query: 191 NYHSVQDALFHITSRLRE 208
+Q+A + + + +++
Sbjct: 440 TQDQIQNAQYLLQNSVKQ 457
>sp|Q5R5H8|HNRPK_PONAB Heterogeneous nuclear ribonucleoprotein K OS=Pongo abelii GN=HNRNPK
PE=2 SV=1
Length = 464
Score = 48.1 bits (113), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 38/64 (59%)
Query: 352 TIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATEGVVMVSGTSDQMRAAQ 411
T +V IP+ + G+ + IR SGA++ +++P G+ + ++ ++GT DQ++ AQ
Sbjct: 389 TTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQDQIQNAQ 448
Query: 412 SLIH 415
L+
Sbjct: 449 YLLQ 452
Score = 45.4 bits (106), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 39/173 (22%), Positives = 72/173 (41%), Gaps = 36/173 (20%)
Query: 47 EEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIAD------------------- 87
+E V ++L G++IGKGG ++ + + AS+ + D
Sbjct: 40 DEMVELRILLQSKNAGAVIGKGGKNIKALRTDYNASVSVPDSSGPERILSISADIETIGE 99
Query: 88 ----ILPDSEERIVVISARENSEM-RHSPAQDAVMRVHSRIAEIGFEPGQAVVARLLVHS 142
I+P EE + + S S++ S A + + H + ++ E RLL+H
Sbjct: 100 ILKKIIPTLEEGLQLPSPTATSQLPLESDAVECLNYQHYKGSDFDCE------LRLLIHQ 153
Query: 143 QQIGCLLGRGGHIVSEMRRATGASIRVFPK------DQAPRCGSPHDEIVQVI 189
G ++G G + E+R T +I++F + D+ G D +V+ I
Sbjct: 154 SLAGGIIGVKGAKIKELRENTQTTIKLFQECCPHSTDRVVLIGGKPDRVVECI 206
Score = 45.4 bits (106), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 33/46 (71%)
Query: 59 DKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISAREN 104
D GS+IGKGG ++ ++E+GASIKI + L SE+RI+ I+ ++
Sbjct: 397 DLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQD 442
Score = 36.6 bits (83), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 18/78 (23%), Positives = 41/78 (52%), Gaps = 5/78 (6%)
Query: 131 GQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAPRCGSPHDEIVQVIG 190
G + ++ + G ++G+GG + ++R +GASI++ P GS D I+ + G
Sbjct: 385 GPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI----DEPLEGS-EDRIITITG 439
Query: 191 NYHSVQDALFHITSRLRE 208
+Q+A + + + +++
Sbjct: 440 TQDQIQNAQYLLQNSVKQ 457
>sp|Q4R4M6|HNRPK_MACFA Heterogeneous nuclear ribonucleoprotein K OS=Macaca fascicularis
GN=HNRNPK PE=2 SV=1
Length = 464
Score = 48.1 bits (113), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 38/64 (59%)
Query: 352 TIEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATEGVVMVSGTSDQMRAAQ 411
T +V IP+ + G+ + IR SGA++ +++P G+ + ++ ++GT DQ++ AQ
Sbjct: 389 TTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQDQIQNAQ 448
Query: 412 SLIH 415
L+
Sbjct: 449 YLLQ 452
Score = 45.4 bits (106), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 39/173 (22%), Positives = 72/173 (41%), Gaps = 36/173 (20%)
Query: 47 EEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIAD------------------- 87
+E V ++L G++IGKGG ++ + + AS+ + D
Sbjct: 40 DEMVELRILLQSKNAGAVIGKGGKNIKALRTDYNASVSVPDSSGPERILSISADIETIGE 99
Query: 88 ----ILPDSEERIVVISARENSEM-RHSPAQDAVMRVHSRIAEIGFEPGQAVVARLLVHS 142
I+P EE + + S S++ S A + + H + ++ E RLL+H
Sbjct: 100 ILKKIIPTLEEGLQLPSPTATSQLPLESDAVECLNYQHYKGSDFDCE------LRLLIHQ 153
Query: 143 QQIGCLLGRGGHIVSEMRRATGASIRVFPK------DQAPRCGSPHDEIVQVI 189
G ++G G + E+R T +I++F + D+ G D +V+ I
Sbjct: 154 SLAGGIIGVKGAKIKELRENTQTTIKLFQECCPHSTDRVVLIGGKPDRVVECI 206
Score = 45.4 bits (106), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 33/46 (71%)
Query: 59 DKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISAREN 104
D GS+IGKGG ++ ++E+GASIKI + L SE+RI+ I+ ++
Sbjct: 397 DLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQD 442
Score = 36.6 bits (83), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 18/78 (23%), Positives = 41/78 (52%), Gaps = 5/78 (6%)
Query: 131 GQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAPRCGSPHDEIVQVIG 190
G + ++ + G ++G+GG + ++R +GASI++ P GS D I+ + G
Sbjct: 385 GPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI----DEPLEGS-EDRIITITG 439
Query: 191 NYHSVQDALFHITSRLRE 208
+Q+A + + + +++
Sbjct: 440 TQDQIQNAQYLLQNSVKQ 457
>sp|Q96I24|FUBP3_HUMAN Far upstream element-binding protein 3 OS=Homo sapiens GN=FUBP3
PE=1 SV=2
Length = 572
Score = 47.0 bits (110), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/191 (22%), Positives = 82/191 (42%), Gaps = 9/191 (4%)
Query: 20 YAPGYHSRGYSSGPGHETVGGRNRMFYEEEVVFKLLCHLDK-VGSLIGKGGSIVRTFQNE 78
Y G R G G++ + ++ V+ + DK VG +IG+GG + Q E
Sbjct: 51 YGYGVQKRPLDDGVGNQL----GALVHQRTVITEEFKVPDKMVGFIIGRGGEQISRIQAE 106
Query: 79 TGASIKIADILPDSEERIVVISAR-ENSEMRHSPAQDAVMRVHSRIAEIGFEPGQAVVAR 137
+G I+IA ER V++ E+ E V R + + +
Sbjct: 107 SGCKIQIASESSGIPERPCVLTGTPESIEQAKRLLGQIVDRCRNGPGFHNDIDSNSTIQE 166
Query: 138 LLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQD 197
+L+ + ++G ++GRGG + +++ TG + + P + D+ +++ G+ VQ
Sbjct: 167 ILIPASKVGLVIGRGGETIKQLQERTGVKMVMIQDGPLP---TGADKPLRITGDAFKVQQ 223
Query: 198 ALFHITSRLRE 208
A + +RE
Sbjct: 224 AREMVLEIIRE 234
>sp|Q80VL1|TDRKH_MOUSE Tudor and KH domain-containing protein OS=Mus musculus GN=Tdrkh
PE=1 SV=1
Length = 560
Score = 45.8 bits (107), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 52/223 (23%), Positives = 95/223 (42%), Gaps = 21/223 (9%)
Query: 47 EEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSE 106
E+++ ++ + V +IG+ G+ ++ + +TGA I + D +ER+++IS
Sbjct: 50 EDDIEIEMRVPQEAVKLIIGRQGANIKQLRKQTGARIDV-DTEDVGDERVLLISG----- 103
Query: 107 MRHSPAQDAVMRVHSRIAEIGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGAS 166
P Q V + + I +I E V +L V + +G ++GRGG + + +A+GA
Sbjct: 104 ---FPVQ--VCKAKAAIHQILTE-NTPVFEQLSVPQRSVGRIIGRGGETIRSICKASGAK 157
Query: 167 IRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKRPGPNNGHSYLP 226
I + + S ++++ G V A I ++ E KR HS
Sbjct: 158 ITCDKESEGTLLLS---RLIKISGTQKEVAAAKHLILEKVSEDEELRKRI----AHSAET 210
Query: 227 PFPEMPPPPFRPRHNPASPGSYPSPVGPFHSMDRGMGPSQPFD 269
P P R R PG + + + MGP+ P +
Sbjct: 211 RVPRKQPISVR-REEVTEPGG-AGEAALWKNTNSSMGPATPLE 251
Score = 35.4 bits (80), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 37/66 (56%), Gaps = 1/66 (1%)
Query: 353 IEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATEGVVMVSGTSDQMRAAQS 412
IE+ +PQ + + G +N+ +R+ +GA + V+ G E V+++SG Q+ A++
Sbjct: 55 IEMRVPQEAVKLIIGRQGANIKQLRKQTGARIDVDTEDVG-DERVLLISGFPVQVCKAKA 113
Query: 413 LIHAFI 418
IH +
Sbjct: 114 AIHQIL 119
>sp|Q8UVD9|FUBP2_CHICK Far upstream element-binding protein 2 OS=Gallus gallus GN=KHSRP
PE=1 SV=1
Length = 769
Score = 45.4 bits (106), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 78/165 (47%), Gaps = 33/165 (20%)
Query: 61 VGSLIGKGGSIVRTFQNETGASIKIADILPDSE---ERIVVISARENSEMRHSPAQDAVM 117
VG +IG+GG + Q ++G ++I+ PDS ER V ++ SP +AV
Sbjct: 220 VGLIIGRGGEQINKIQQDSGCKVQIS---PDSGGLPERSVSLTG--------SP--EAVQ 266
Query: 118 RVHSRIAEI-----GFEPGQ---------AVVARLLVHSQQIGCLLGRGGHIVSEMRRAT 163
+ + +I G PGQ V +++ + + G ++G+GG + +++
Sbjct: 267 KAKLMLDDIVSRGRGGPPGQFHDYANGQNGTVQEIMIPAGKAGLVIGKGGETIKQLQERA 326
Query: 164 GASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRE 208
G + +F +D + D+ +++IG+ + VQ A + LRE
Sbjct: 327 GVKM-IFIQDGSQNTNV--DKPLRIIGDPYKVQQACEMVMDILRE 368
Score = 32.3 bits (72), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 73/174 (41%), Gaps = 22/174 (12%)
Query: 26 SRGYSSGPG--HETVGGRNRMFYEEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASI 83
SRG PG H+ G+N E ++ K G +IGKGG ++ Q G +
Sbjct: 277 SRGRGGPPGQFHDYANGQNGTVQE------IMIPAGKAGLVIGKGGETIKQLQERAG--V 328
Query: 84 KIADILPDSEERIVVISARENSE-MRHSPAQDAVMRVHSRIAEIGFEPGQAVVARLL--- 139
K+ I S+ V R + + A + VM + + GF +R+
Sbjct: 329 KMIFIQDGSQNTNVDKPLRIIGDPYKVQQACEMVMDILRERDQGGFGDRNEYGSRIGGGI 388
Query: 140 ---VHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAPRCGSPHDEIVQVIG 190
V +G ++GR G ++ +++ G I+ F +D G+ ++I ++G
Sbjct: 389 DVPVPRHSVGVVIGRSGEMIKKIQNDAGVRIQ-FKQDD----GTGPEKIAHIMG 437
>sp|Q96AE4|FUBP1_HUMAN Far upstream element-binding protein 1 OS=Homo sapiens GN=FUBP1
PE=1 SV=3
Length = 644
Score = 45.4 bits (106), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 75/160 (46%), Gaps = 26/160 (16%)
Query: 61 VGSLIGKGGSIVRTFQNETGASIKIADILPDSE---ERIVVISARENSEMRHSPAQDAVM 117
VG +IG+GG + Q E+G I+IA PDS ER +++ S +
Sbjct: 112 VGFIIGRGGEQISRIQQESGCKIQIA---PDSGGLPERSCMLTGTPESVQ-------SAK 161
Query: 118 RVHSRIAEIGF---------EPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIR 168
R+ +I E G PG A V +++ + + G ++G+GG + +++ G +
Sbjct: 162 RLLDQIVEKGRPAPGFHHGDGPGNA-VQEIMIPASKAGLVIGKGGETIKQLQERAGVKM- 219
Query: 169 VFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRE 208
V +D G+ D+ +++ G+ + VQ A + +R+
Sbjct: 220 VMIQDGPQNTGA--DKPLRITGDPYKVQQAKEMVLELIRD 257
Score = 39.3 bits (90), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 41/193 (21%), Positives = 76/193 (39%), Gaps = 28/193 (14%)
Query: 21 APGYHSRGYSSGPGHETVGGRNRMFYEEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETG 80
APG+H + GPG+ V +++ K G +IGKGG ++ Q G
Sbjct: 174 APGFH---HGDGPGN--------------AVQEIMIPASKAGLVIGKGGETIKQLQERAG 216
Query: 81 ASIKIADILPDSE--ERIVVISARENSEMRHSPAQDAVMRVHSRIAEIGFEPGQAVVAR- 137
+ + P + ++ + I+ + ++R E+ E G +
Sbjct: 217 VKMVMIQDGPQNTGADKPLRITGDPYKVQQAKEMVLELIRDQGGFREVRNEYGSRIGGNE 276
Query: 138 ---LLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHS 194
+ + +G ++GR G ++ +++ G I+ P D G+ + I Q+ G
Sbjct: 277 GIDVPIPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDD-----GTTPERIAQITGPPDR 331
Query: 195 VQDALFHITSRLR 207
Q A IT LR
Sbjct: 332 CQHAAEIITDLLR 344
>sp|Q3U0V1|FUBP2_MOUSE Far upstream element-binding protein 2 OS=Mus musculus GN=Khsrp
PE=1 SV=2
Length = 748
Score = 45.1 bits (105), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/162 (23%), Positives = 72/162 (44%), Gaps = 26/162 (16%)
Query: 61 VGSLIGKGGSIVRTFQNETGASIKIADILPDS----EERIVVISARENSEMRHSPAQDAV 116
VG +IG+GG + Q ++G ++I+ PDS E + + A E+ + D V
Sbjct: 157 VGLIIGRGGEQINKIQQDSGCKVQIS---PDSGGLPERSVSLTGAPESVQKAKMMLDDIV 213
Query: 117 MRVHSRIAEIGFEPGQ----------AVVARLLVHSQQIGCLLGRGGHIVSEMRRATGAS 166
R G PGQ V +++ + + G ++G+GG + +++ G
Sbjct: 214 SRGR------GGPPGQFHDNANGGQNGTVQEIMIPAGKAGLVIGKGGETIKQLQERAGVK 267
Query: 167 IRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRE 208
+ + Q + D+ +++IG+ + VQ A + LRE
Sbjct: 268 MILI---QDGSQNTNVDKPLRIIGDPYKVQQACEMVMDILRE 306
Score = 32.3 bits (72), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 25/42 (59%), Gaps = 2/42 (4%)
Query: 49 EVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILP 90
E+ F + H K G +IG+GG V+ +TGA ++I+ LP
Sbjct: 427 EMTFSIPTH--KCGLVIGRGGENVKAINQQTGAFVEISRQLP 466
>sp|Q92945|FUBP2_HUMAN Far upstream element-binding protein 2 OS=Homo sapiens GN=KHSRP
PE=1 SV=4
Length = 711
Score = 44.7 bits (104), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/162 (23%), Positives = 72/162 (44%), Gaps = 26/162 (16%)
Query: 61 VGSLIGKGGSIVRTFQNETGASIKIADILPDS----EERIVVISARENSEMRHSPAQDAV 116
VG +IG+GG + Q ++G ++I+ PDS E + + A E+ + D V
Sbjct: 156 VGLIIGRGGEQINKIQQDSGCKVQIS---PDSGGLPERSVSLTGAPESVQKAKMMLDDIV 212
Query: 117 MRVHSRIAEIGFEPGQ----------AVVARLLVHSQQIGCLLGRGGHIVSEMRRATGAS 166
R G PGQ V +++ + + G ++G+GG + +++ G
Sbjct: 213 SRGR------GGPPGQFHDNANGGQNGTVQEIMIPAGKAGLVIGKGGETIKQLQERAGVK 266
Query: 167 IRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRE 208
+ + Q + D+ +++IG+ + VQ A + LRE
Sbjct: 267 MILI---QDGSQNTNVDKPLRIIGDPYKVQQACEMVMDILRE 305
Score = 32.3 bits (72), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 25/42 (59%), Gaps = 2/42 (4%)
Query: 49 EVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILP 90
E+ F + H K G +IG+GG V+ +TGA ++I+ LP
Sbjct: 426 EMTFSIPTH--KCGLVIGRGGENVKAINQQTGAFVEISRQLP 465
>sp|Q32PX7|FUBP1_RAT Far upstream element-binding protein 1 OS=Rattus norvegicus
GN=Fubp1 PE=1 SV=1
Length = 639
Score = 44.7 bits (104), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 75/160 (46%), Gaps = 26/160 (16%)
Query: 61 VGSLIGKGGSIVRTFQNETGASIKIADILPDSE---ERIVVISARENSEMRHSPAQDAVM 117
VG +IG+GG + Q E+G I+IA PDS ER +++ S +
Sbjct: 107 VGFIIGRGGEQISRIQQESGCKIQIA---PDSGGLPERSCMLTGTPESVQ-------SAK 156
Query: 118 RVHSRIAEIGF---------EPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIR 168
R+ +I E G PG A V +++ + + G ++G+GG + +++ G +
Sbjct: 157 RLLDQIVEKGRPAPGFHHGDGPGNA-VQEIMIPASKAGLVIGKGGETIKQLQERAGVKM- 214
Query: 169 VFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRE 208
V +D G+ D+ +++ G+ + VQ A + +R+
Sbjct: 215 VMIQDGPQNTGA--DKPLRITGDPYKVQQAKEMVLELIRD 252
Score = 40.0 bits (92), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 42/193 (21%), Positives = 76/193 (39%), Gaps = 28/193 (14%)
Query: 21 APGYHSRGYSSGPGHETVGGRNRMFYEEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETG 80
APG+H + GPG+ V +++ K G +IGKGG ++ Q G
Sbjct: 169 APGFH---HGDGPGN--------------AVQEIMIPASKAGLVIGKGGETIKQLQERAG 211
Query: 81 ASIKIADILPDSE--ERIVVISARENSEMRHSPAQDAVMRVHSRIAEIGFEPGQAVVAR- 137
+ + P + ++ + I+ + ++R E+ E G +
Sbjct: 212 VKMVMIQDGPQNTGADKPLRITGDPYKVQQAKEMVLELIRDQGGFREVRNEYGSRIGGNE 271
Query: 138 ---LLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHS 194
+ + +G ++GR G ++ +++ G I+ P D G+ D I Q+ G
Sbjct: 272 GIDVPIPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDD-----GTTPDRIAQITGPPDR 326
Query: 195 VQDALFHITSRLR 207
Q A IT LR
Sbjct: 327 CQHAAEIITDLLR 339
>sp|Q99PF5|FUBP2_RAT Far upstream element-binding protein 2 OS=Rattus norvegicus
GN=Khsrp PE=1 SV=1
Length = 721
Score = 44.7 bits (104), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/162 (23%), Positives = 72/162 (44%), Gaps = 26/162 (16%)
Query: 61 VGSLIGKGGSIVRTFQNETGASIKIADILPDS----EERIVVISARENSEMRHSPAQDAV 116
VG +IG+GG + Q ++G ++I+ PDS E + + A E+ + D V
Sbjct: 157 VGLIIGRGGEQINKIQQDSGCKVQIS---PDSGGLPERSVSLTGAPESVQKAKMMLDDIV 213
Query: 117 MRVHSRIAEIGFEPGQ----------AVVARLLVHSQQIGCLLGRGGHIVSEMRRATGAS 166
R G PGQ V +++ + + G ++G+GG + +++ G
Sbjct: 214 SRGR------GGPPGQFHDNANGGQNGTVQEIMIPAGKAGLVIGKGGETIKQLQERAGVK 267
Query: 167 IRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRE 208
+ + Q + D+ +++IG+ + VQ A + LRE
Sbjct: 268 MILI---QDGSQNTNVDKPLRIIGDPYKVQQACEMVMDILRE 306
Score = 32.3 bits (72), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 25/42 (59%), Gaps = 2/42 (4%)
Query: 49 EVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILP 90
E+ F + H K G +IG+GG V+ +TGA ++I+ LP
Sbjct: 427 EMTFSIPTH--KCGLVIGRGGENVKAINQQTGAFVEISRQLP 466
>sp|Q91WJ8|FUBP1_MOUSE Far upstream element-binding protein 1 OS=Mus musculus GN=Fubp1
PE=1 SV=1
Length = 651
Score = 44.3 bits (103), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 75/160 (46%), Gaps = 26/160 (16%)
Query: 61 VGSLIGKGGSIVRTFQNETGASIKIADILPDSE---ERIVVISARENSEMRHSPAQDAVM 117
VG +IG+GG + Q E+G I+IA PDS ER +++ S +
Sbjct: 108 VGFIIGRGGEQISRIQQESGCKIQIA---PDSGGLPERSCMLTGTPESVQ-------SAK 157
Query: 118 RVHSRIAEIGF---------EPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIR 168
R+ +I E G PG A V +++ + + G ++G+GG + +++ G +
Sbjct: 158 RLLDQIVEKGRPAPGFHHGDGPGNA-VQEIMIPASKAGLVIGKGGETIKQLQERAGVKM- 215
Query: 169 VFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRE 208
V +D G+ D+ +++ G+ + VQ A + +R+
Sbjct: 216 VMIQDGPQNTGA--DKPLRITGDPYKVQQAKEMVLELIRD 253
Score = 39.7 bits (91), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 42/193 (21%), Positives = 76/193 (39%), Gaps = 28/193 (14%)
Query: 21 APGYHSRGYSSGPGHETVGGRNRMFYEEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETG 80
APG+H + GPG+ V +++ K G +IGKGG ++ Q G
Sbjct: 170 APGFH---HGDGPGN--------------AVQEIMIPASKAGLVIGKGGETIKQLQERAG 212
Query: 81 ASIKIADILPDSE--ERIVVISARENSEMRHSPAQDAVMRVHSRIAEIGFEPGQAVVAR- 137
+ + P + ++ + I+ + ++R E+ E G +
Sbjct: 213 VKMVMIQDGPQNTGADKPLRITGDPYKVQQAKEMVLELIRDQGGFREVRNEYGSRIGGNE 272
Query: 138 ---LLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHS 194
+ + +G ++GR G ++ +++ G I+ P D G+ D I Q+ G
Sbjct: 273 GIDVPIPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDD-----GTTPDRIAQITGPPDR 327
Query: 195 VQDALFHITSRLR 207
Q A IT LR
Sbjct: 328 CQHAAEIITDLLR 340
>sp|O74919|RNC1_SCHPO RNA-binding protein rnc1 OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=rnc1 PE=1 SV=1
Length = 398
Score = 43.9 bits (102), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 39/77 (50%), Gaps = 12/77 (15%)
Query: 134 VVARLLVHSQQIGCLLGRGGHIVSEMRRATGASIRVFPKDQAPRCGSPHDE----IVQVI 189
V + + + +GC++GRGG +SE+RR +G+ I + PHDE + +
Sbjct: 321 VTQNISIPADMVGCIIGRGGSKISEIRRTSGSKISI--------AKEPHDETGERMFTIT 372
Query: 190 GNYHSVQDALFHITSRL 206
G + + ALF + +L
Sbjct: 373 GTHEENEKALFLLYQQL 389
Score = 35.4 bits (80), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 35/169 (20%), Positives = 70/169 (41%), Gaps = 25/169 (14%)
Query: 45 FYEEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISAREN 104
+ +++ + L + G +IGK G V ++ T + +P+ +R++ IS
Sbjct: 89 YATQQLTLRALLSTREAGIIIGKAGKNVAELRSTTNVKAGVTKAVPNVHDRVLTISG--- 145
Query: 105 SEMRHSPAQDAVMRVHSRIAEIGFE--------PGQAVV---ARLLVHSQQIGCLLGRGG 153
P ++ V+R + I +I + P A RLL+ +G ++GR G
Sbjct: 146 ------PLEN-VVRAYRFIIDIFAKNSTNPDGTPSDANTPRKLRLLIAHSLMGSIIGRNG 198
Query: 154 HIVSEMRRATGASIRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHI 202
+ ++ + + KD P+ EI + N H+ A++ I
Sbjct: 199 LRIKLIQDKCSCRM-IASKDMLPQSTERTVEIHGTVDNLHA---AIWEI 243
>sp|Q9Y2W6|TDRKH_HUMAN Tudor and KH domain-containing protein OS=Homo sapiens GN=TDRKH
PE=1 SV=2
Length = 561
Score = 43.9 bits (102), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 94/222 (42%), Gaps = 21/222 (9%)
Query: 47 EEEVVFKLLCHLDKVGSLIGKGGSIVRTFQNETGASIKIADILPDSEERIVVISARENSE 106
E+++ ++ + V +IG+ G+ ++ + +TGA I + D +ER+++IS
Sbjct: 50 EDDIEIEMRVPQEAVKLIIGRQGANIKQLRKQTGARIDV-DTEDVGDERVLLISG----- 103
Query: 107 MRHSPAQDAVMRVHSRIAEIGFEPGQAVVARLLVHSQQIGCLLGRGGHIVSEMRRATGAS 166
P Q V + + I +I E V +L V + +G ++GRGG + + +A+GA
Sbjct: 104 ---FPVQ--VCKAKAAIHQILTE-NTPVSEQLSVPQRSVGRIIGRGGETIRSICKASGAK 157
Query: 167 IRVFPKDQAPRCGSPHDEIVQVIGNYHSVQDALFHITSRLRETIFPMKRPGPNNGHSYLP 226
I + + S ++++ G V A I ++ E KR HS
Sbjct: 158 ITCDKESEGTLLLS---RLIKISGTQKEVAAAKHLILEKVSEDEELRKRI----AHSAET 210
Query: 227 PFPEMPPPPFRPRHNPASPGSYPSPVGPFHSMDRGMGPSQPF 268
P P R R + PG P + + M P+ P
Sbjct: 211 RVPRKQPISVR-REDMTEPGGAGEP-ALWKNTSSSMEPTAPL 250
Score = 35.4 bits (80), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 37/66 (56%), Gaps = 1/66 (1%)
Query: 353 IEVVIPQLYMAHVYGENNSNLSHIRQISGANVVVNDPKPGATEGVVMVSGTSDQMRAAQS 412
IE+ +PQ + + G +N+ +R+ +GA + V+ G E V+++SG Q+ A++
Sbjct: 55 IEMRVPQEAVKLIIGRQGANIKQLRKQTGARIDVDTEDVG-DERVLLISGFPVQVCKAKA 113
Query: 413 LIHAFI 418
IH +
Sbjct: 114 AIHQIL 119
>sp|Q2SZN9|PNP_BURTA Polyribonucleotide nucleotidyltransferase OS=Burkholderia
thailandensis (strain E264 / ATCC 700388 / DSM 13276 /
CIP 106301) GN=pnp PE=3 SV=1
Length = 713
Score = 42.7 bits (99), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 68/154 (44%), Gaps = 22/154 (14%)
Query: 13 EPFHQRGYAPGYHSRGYSSGPGHETVGGRNRMFYE---EEVVFKLLCHLDKVGSLIGKGG 69
+ Q A R + G E V G N E + K+ + +K+ +IGKGG
Sbjct: 523 KEIMQVALAQAKEGRMHILGKMKEAVAGANTQLSEFAPRMITIKI--NPEKIRDVIGKGG 580
Query: 70 SIVRTFQNETGASIKIADILPDSEERIVVISARENSEMRHSPAQDAVMRVHSRIAEIGFE 129
S++R ETG +I I+D D VV A NSE +A R+ + AEI E
Sbjct: 581 SVIRALTEETGTTIDISD---DG----VVTIASTNSE----GMAEAKKRIENITAEI--E 627
Query: 130 PGQA---VVARLLVHSQQIGCLLGRGGHI-VSEM 159
GQ V +LL + L G+ G + +SE+
Sbjct: 628 VGQVYEGTVLKLLDFGAIVNLLPGKDGLLHISEI 661
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.137 0.422
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 187,162,561
Number of Sequences: 539616
Number of extensions: 9262473
Number of successful extensions: 36059
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 437
Number of HSP's successfully gapped in prelim test: 760
Number of HSP's that attempted gapping in prelim test: 30403
Number of HSP's gapped (non-prelim): 4320
length of query: 424
length of database: 191,569,459
effective HSP length: 120
effective length of query: 304
effective length of database: 126,815,539
effective search space: 38551923856
effective search space used: 38551923856
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 63 (28.9 bits)