Your job contains 1 sequence.
>014453
MQSIENLVTQIQGLSSNASDITALKDYLKAAEDLLRSESTRLLSFLDQLDPSKHSLGYLY
FLEPCMYCSITKERANTLVPIIARFITSCSAEQIRYVPEKFINVCKRYKDQVLLLEAPIR
GVGPMLTAIRKIQSSTEHLTTLHPEFLQLCLLAKCYKAGLSVLEDDIYEINLPRDFFLYC
YYGGMIFIGQKRFRKALELLHNVVTAPMSSINAIAVEAYKKYILVSLIHHGQFSSTLPKY
TSSAAQRNLKNFSQPYMELVNTYNTGKIVELETYVQTNREKFESDNNLGLVKQVVSSMYK
RNIQRLTQTYLTLSLQDIANTVQLNSSKEAEMHVLQMIQDGEIFATINQKDGMVRFLEDP
EQYKTCEMIEHIDSSIQRIMSLSKKLTAMDELISCDPLYLGKAGRERQRFDFDDFDSVPQ
KFNI
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 014453
(424 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2145638 - symbol:COP13 "AT5G14250" species:370... 1374 1.9e-140 1
UNIPROTKB|Q9UNS2 - symbol:COPS3 "COP9 signalosome complex... 775 5.5e-77 1
MGI|MGI:1349409 - symbol:Cops3 "COP9 (constitutive photom... 774 7.1e-77 1
RGD|1303002 - symbol:Cops3 "COP9 signalosome subunit 3" s... 774 7.1e-77 1
UNIPROTKB|A6H7B5 - symbol:COPS3 "COP9 signalosome complex... 772 1.1e-76 1
UNIPROTKB|Q5ZJF1 - symbol:COPS3 "COP9 signalosome complex... 771 1.5e-76 1
UNIPROTKB|E2RD70 - symbol:COPS3 "Uncharacterized protein"... 769 2.4e-76 1
UNIPROTKB|F1SB16 - symbol:COPS3 "Uncharacterized protein"... 768 3.1e-76 1
ZFIN|ZDB-GENE-030131-7660 - symbol:cops3 "COP9 constituti... 767 3.9e-76 1
DICTYBASE|DDB_G0291848 - symbol:csn3 "proteasome componen... 677 1.3e-66 1
FB|FBgn0027055 - symbol:CSN3 "COP9 complex homolog subuni... 506 1.8e-48 1
ASPGD|ASPL0000007455 - symbol:csnC species:162425 "Emeric... 221 3.7e-21 2
ZFIN|ZDB-GENE-040426-1444 - symbol:psmd3 "proteasome (pro... 194 2.3e-12 1
UNIPROTKB|B4DT72 - symbol:PSMD3 "26S proteasome non-ATPas... 188 4.3e-12 1
UNIPROTKB|G4NAX6 - symbol:MGG_00687 "Uncharacterized prot... 161 5.8e-12 3
MGI|MGI:98858 - symbol:Psmd3 "proteasome (prosome, macrop... 188 1.2e-11 1
RGD|1311470 - symbol:Psmd3 "proteasome (prosome, macropai... 188 1.2e-11 1
UNIPROTKB|Q2KJ46 - symbol:PSMD3 "26S proteasome non-ATPas... 188 1.2e-11 1
UNIPROTKB|E2QUY7 - symbol:PSMD3 "Uncharacterized protein"... 188 1.2e-11 1
UNIPROTKB|O43242 - symbol:PSMD3 "26S proteasome non-ATPas... 188 1.2e-11 1
DICTYBASE|DDB_G0288621 - symbol:psmD3 "26S proteasome non... 185 2.3e-11 1
TAIR|locus:2204385 - symbol:AT1G75990 species:3702 "Arabi... 178 1.3e-10 1
UNIPROTKB|F1RXA7 - symbol:LOC100512253 "Uncharacterized p... 177 2.0e-10 1
UNIPROTKB|G4NDR0 - symbol:MGG_00884 "26S proteasome non-A... 177 2.2e-10 1
TAIR|locus:2198561 - symbol:EMB2719 "EMBRYO DEFECTIVE 271... 172 6.1e-10 1
WB|WBGene00000815 - symbol:csn-3 species:6239 "Caenorhabd... 169 1.4e-09 1
ASPGD|ASPL0000036390 - symbol:AN10337 species:162425 "Eme... 149 3.4e-07 1
POMBASE|SPAC222.16c - symbol:csn3 "COP9/signalosome compl... 142 6.4e-07 1
WB|WBGene00004460 - symbol:rpn-3 species:6239 "Caenorhabd... 143 1.1e-06 1
UNIPROTKB|Q04908 - symbol:rpn-3 "26S proteasome non-ATPas... 143 1.1e-06 1
CGD|CAL0001433 - symbol:RPN3 species:5476 "Candida albica... 139 2.7e-06 1
FB|FBgn0261396 - symbol:Rpn3 "Regulatory particle non-ATP... 133 1.3e-05 1
POMBASE|SPBC119.01 - symbol:rpn3 "19S proteasome regulato... 131 2.2e-05 1
UNIPROTKB|J3QKR0 - symbol:COPS3 "COP9 signalosome complex... 106 3.5e-05 1
SGD|S000000823 - symbol:RPN3 "non-ATPase regulatory subun... 127 6.6e-05 1
>TAIR|locus:2145638 [details] [associations]
symbol:COP13 "AT5G14250" species:3702 "Arabidopsis
thaliana" [GO:0008180 "signalosome" evidence=TAS;IPI] [GO:0009640
"photomorphogenesis" evidence=RCA;TAS] [GO:0005515 "protein
binding" evidence=IPI] [GO:0010388 "cullin deneddylation"
evidence=RCA;IMP] [GO:0010971 "positive regulation of G2/M
transition of mitotic cell cycle" evidence=IMP] [GO:0005829
"cytosol" evidence=IDA] [GO:0000278 "mitotic cell cycle"
evidence=RCA] [GO:0006312 "mitotic recombination" evidence=RCA]
[GO:0006396 "RNA processing" evidence=RCA] [GO:0009560 "embryo sac
egg cell differentiation" evidence=RCA] [GO:0009793 "embryo
development ending in seed dormancy" evidence=RCA] [GO:0009845
"seed germination" evidence=RCA] [GO:0009909 "regulation of flower
development" evidence=RCA] [GO:0009933 "meristem structural
organization" evidence=RCA] [GO:0010162 "seed dormancy process"
evidence=RCA] [GO:0010182 "sugar mediated signaling pathway"
evidence=RCA] [GO:0010228 "vegetative to reproductive phase
transition of meristem" evidence=RCA] [GO:0016567 "protein
ubiquitination" evidence=RCA] [GO:0016571 "histone methylation"
evidence=RCA] [GO:0016579 "protein deubiquitination" evidence=RCA]
[GO:0019915 "lipid storage" evidence=RCA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=RCA]
[GO:0050826 "response to freezing" evidence=RCA] [GO:0051604
"protein maturation" evidence=RCA] InterPro:IPR000717 Pfam:PF01399
SMART:SM00088 GO:GO:0007275 GO:GO:0005829 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0000085 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0009585 EMBL:AL163817 GO:GO:0008180
GO:GO:0010388 EMBL:AF361759 EMBL:AF361760 EMBL:AF395059
EMBL:AF419585 EMBL:AY113041 EMBL:AY084910 IPI:IPI00524958
PIR:T48598 RefSeq:NP_568296.1 UniGene:At.5163
ProteinModelPortal:Q8W575 SMR:Q8W575 IntAct:Q8W575 STRING:Q8W575
PaxDb:Q8W575 PRIDE:Q8W575 DNASU:831275 EnsemblPlants:AT5G14250.1
GeneID:831275 KEGG:ath:AT5G14250 TAIR:At5g14250 eggNOG:NOG249849
HOGENOM:HOG000030451 InParanoid:Q8W575 KO:K12177 OMA:DRALYFF
PhylomeDB:Q8W575 ProtClustDB:CLSN2689667 Genevestigator:Q8W575
Uniprot:Q8W575
Length = 429
Score = 1374 (488.7 bits), Expect = 1.9e-140, P = 1.9e-140
Identities = 276/425 (64%), Positives = 329/425 (77%)
Query: 1 MQSIENLVTQIQGLSSNASDITALKDYLKAAEDLLRSESTRLLSFLDQLDPSKHSLGYLY 60
+ S+E ++T IQGLS + D++AL D L+ A+D LR+E S LDQLD SKHSLGYLY
Sbjct: 5 VNSVEAVITSIQGLSGSPEDLSALHDLLRGAQDSLRAEPGVNFSTLDQLDASKHSLGYLY 64
Query: 61 FLEPCMYCSITKERANTLVPIIARFITSCSAEQIRYVPEKFINVCKRYKDQVLLLEAPIR 120
FLE ++KE+A +PIIARFI SC A QIR KF+++CK KD V+ L P+R
Sbjct: 65 FLEVLTCGPVSKEKAAYEIPIIARFINSCDAGQIRLASYKFVSLCKILKDHVIALGDPLR 124
Query: 121 GVGPMLTAIRKIQSSTEHLTTLHPEFLQLCLLAKCYKAGLSVLEDDIYEINLPRDFFLYC 180
GVGP+L A++K+Q S++ LT LHP+ LQLCL AK YK+G S+L DDI EI+ PRDFFLY
Sbjct: 125 GVGPLLNAVQKLQVSSKRLTALHPDVLQLCLQAKSYKSGFSILSDDIVEIDQPRDFFLYS 184
Query: 181 YYGGMIFIGQKRFRKALELLHNVVTAPMSSINAIAVEAYKKYILVSLIHHGQFSSTLPKY 240
YYGGMI IG KRF+KALELL+NVVTAPM +NAIA+EAYKKYILVSLIH+GQF++TLPK
Sbjct: 185 YYGGMICIGLKRFQKALELLYNVVTAPMHQVNAIALEAYKKYILVSLIHNGQFTNTLPKC 244
Query: 241 TSSAAQRNLKNFSQPYMELVNTYNTGKIVELETYVQTNREKFESDNNLGLVKQVVSSMYK 300
S+AAQR+ KN++ PY+EL N YN GKI ELE V +FE D NLGLVKQ VSS+YK
Sbjct: 245 ASTAAQRSFKNYTGPYIELGNCYNDGKIGELEALVVARNAEFEEDKNLGLVKQAVSSLYK 304
Query: 301 RNIQRLTQTYLTLSLQDIANTVQLNSSKEAEMHVLQMIQDGEIFATINQKDGMVRFLEDP 360
RNI RLTQ YLTLSLQDIAN VQL ++KEAEMHVLQMIQDG+I A INQKDGMVRFLEDP
Sbjct: 305 RNILRLTQKYLTLSLQDIANMVQLGNAKEAEMHVLQMIQDGQIHALINQKDGMVRFLEDP 364
Query: 361 EQYKTCEMIEHIDSSIQRIMSLSKKLTAMDELISCDPLYLGKAGRERQRXXXXXXX-SVP 419
EQYK+ EMIE +DS IQR + LSK L AMDE +SCDPLYLGK GRERQR +VP
Sbjct: 365 EQYKSSEMIEIMDSVIQRTIGLSKNLLAMDESLSCDPLYLGKVGRERQRYDFGDDFDTVP 424
Query: 420 QKFNI 424
QKF++
Sbjct: 425 QKFSM 429
>UNIPROTKB|Q9UNS2 [details] [associations]
symbol:COPS3 "COP9 signalosome complex subunit 3"
species:9606 "Homo sapiens" [GO:0001701 "in utero embryonic
development" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0008180 "signalosome" evidence=IDA] [GO:0010388
"cullin deneddylation" evidence=IDA] [GO:0009416 "response to light
stimulus" evidence=TAS] [GO:0007165 "signal transduction"
evidence=TAS] [GO:0005634 "nucleus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR000717 Pfam:PF01399
SMART:SM00088 GO:GO:0005737 GO:GO:0007165 GO:GO:0001701
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0009416 EMBL:CH471196
GO:GO:0008180 CleanEx:HS_CSN3 GO:GO:0010388 eggNOG:NOG249849
HOGENOM:HOG000030451 KO:K12177 OMA:DRALYFF CTD:8533
HOVERGEN:HBG051135 OrthoDB:EOG49KFQJ EMBL:AF031647 EMBL:AF098109
EMBL:AK312476 EMBL:AK302304 EMBL:AK316400 EMBL:AC055811
EMBL:BC001891 IPI:IPI00025721 RefSeq:NP_001186054.1
RefSeq:NP_003644.2 UniGene:Hs.6076 ProteinModelPortal:Q9UNS2
DIP:DIP-32478N IntAct:Q9UNS2 MINT:MINT-129190 STRING:Q9UNS2
PhosphoSite:Q9UNS2 DMDM:55976621 PaxDb:Q9UNS2 PeptideAtlas:Q9UNS2
PRIDE:Q9UNS2 DNASU:8533 Ensembl:ENST00000268717
Ensembl:ENST00000539941 GeneID:8533 KEGG:hsa:8533 UCSC:uc002grd.3
GeneCards:GC17M017151 HGNC:HGNC:2239 HPA:HPA021997 MIM:604665
neXtProt:NX_Q9UNS2 PharmGKB:PA26755 InParanoid:Q9UNS2
PhylomeDB:Q9UNS2 ChiTaRS:COPS3 GenomeRNAi:8533 NextBio:31960
ArrayExpress:Q9UNS2 Bgee:Q9UNS2 CleanEx:HS_COPS3
Genevestigator:Q9UNS2 GermOnline:ENSG00000141030 Uniprot:Q9UNS2
Length = 423
Score = 775 (277.9 bits), Expect = 5.5e-77, P = 5.5e-77
Identities = 169/407 (41%), Positives = 248/407 (60%)
Query: 3 SIENLVTQIQGLSSNASDITALKDYLKAAEDLLRSESTRLLSFLDQLDPSKHSLGYLYFL 62
++E V ++ LS+ +T L + + + +LL + L + L LD +HSLG L L
Sbjct: 4 ALEQFVNSVRQLSAQGQ-MTQLCELINKSGELLAKNLSHLDTVLGALDVQEHSLGVLAVL 62
Query: 63 EPCMYCSITKERANTLVPIIARFITSCSAEQIRYVPEKFINVCKRYKDQVLLLEAPIRGV 122
+ + TL + FI++C+ E IRY + F +C + + ++ + P+RG+
Sbjct: 63 F-VKFSMPSVPDFETLFSQVQLFISTCNGEHIRYATDTFAGLCHQLTNALVERKQPLRGI 121
Query: 123 GPMLTAIRKIQSSTEHLTTLHPEFLQLCLLAKCYKAGLSVLEDDIYEI---NLPRD---F 176
G + AI K+Q +T LT++H + QLCLLAKC+K L L+ D+ +I N D F
Sbjct: 122 GILKQAIDKMQMNTNQLTSIHADLCQLCLLAKCFKPALPYLDVDMMDICKENGAYDAKHF 181
Query: 177 FLYCYYGGMIFIGQKRFRKALELLHNVVTAPMSSINAIAVEAYKKYILVSLIHHGQFSST 236
Y YYGGMI+ G K F +AL +T P +++ I +E+YKKYILVSLI G+
Sbjct: 182 LCYYYYGGMIYTGLKNFERALYFYEQAITTPAMAVSHIMLESYKKYILVSLILLGKVQQ- 240
Query: 237 LPKYTSSAAQRNLKNFSQPYMELVNTYNTGKIVELETYVQTNREKFESDNNLGLVKQVVS 296
LPKYTS R +K S Y EL Y+T EL V + E F DNN+GLVKQ +S
Sbjct: 241 LPKYTSQIVGRFIKPLSNAYHELAQVYSTNNPSELRNLVNKHSETFTRDNNMGLVKQCLS 300
Query: 297 SMYKRNIQRLTQTYLTLSLQDIANTVQLNSSKEAEMHVLQMIQDGEIFATINQKDGMVRF 356
S+YK+NIQRLT+T+LTLSLQD+A+ VQL+ +EAE +VL MI+DGEIFA+INQKDGMV F
Sbjct: 301 SLYKKNIQRLTKTFLTLSLQDMASRVQLSGPQEAEKYVLHMIEDGEIFASINQKDGMVSF 360
Query: 357 LEDPEQYKTCEMIEHIDSSIQRIMSLSKKLTAMDELISCDPLYLGKA 403
++PE+Y M+ +ID + + + L ++L AMD+ I+ +P ++ K+
Sbjct: 361 HDNPEKYNNPAMLHNIDQEMLKCIELDERLKAMDQEITVNPQFVQKS 407
>MGI|MGI:1349409 [details] [associations]
symbol:Cops3 "COP9 (constitutive photomorphogenic) homolog,
subunit 3 (Arabidopsis thaliana)" species:10090 "Mus musculus"
[GO:0001701 "in utero embryonic development" evidence=IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0008180
"signalosome" evidence=ISO;IDA] [GO:0010388 "cullin deneddylation"
evidence=ISO] InterPro:IPR000717 Pfam:PF01399 SMART:SM00088
MGI:MGI:1349409 GO:GO:0005737 GO:GO:0001701 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0008180 CleanEx:MM_CSN3 GO:GO:0010388
eggNOG:NOG249849 HOGENOM:HOG000030451 KO:K12177 OMA:DRALYFF
CTD:8533 HOVERGEN:HBG051135 OrthoDB:EOG49KFQJ EMBL:AF071313
EMBL:BC068179 IPI:IPI00131870 RefSeq:NP_036121.1 UniGene:Mm.40
ProteinModelPortal:O88543 IntAct:O88543 STRING:O88543
PhosphoSite:O88543 PaxDb:O88543 PRIDE:O88543
Ensembl:ENSMUST00000019517 GeneID:26572 KEGG:mmu:26572
InParanoid:O88543 NextBio:304659 Bgee:O88543 Genevestigator:O88543
GermOnline:ENSMUSG00000019373 Uniprot:O88543
Length = 423
Score = 774 (277.5 bits), Expect = 7.1e-77, P = 7.1e-77
Identities = 169/407 (41%), Positives = 248/407 (60%)
Query: 3 SIENLVTQIQGLSSNASDITALKDYLKAAEDLLRSESTRLLSFLDQLDPSKHSLGYLYFL 62
++E V ++ LS+ +T L + + + +LL + L + L LD +HSLG L L
Sbjct: 4 ALEQFVNSVRQLSAQGQ-MTQLCELINKSGELLAKNLSHLDTVLGALDVQEHSLGVLAVL 62
Query: 63 EPCMYCSITKERANTLVPIIARFITSCSAEQIRYVPEKFINVCKRYKDQVLLLEAPIRGV 122
+ + TL + FI++C+ E IRY + F +C + + ++ + P+RG+
Sbjct: 63 F-VKFSMPSVPDFETLFSQVQLFISTCNGEHIRYATDTFAGLCHQLTNALVERKQPLRGI 121
Query: 123 GPMLTAIRKIQSSTEHLTTLHPEFLQLCLLAKCYKAGLSVLEDDIYEI---NLPRD---F 176
G + AI K+Q +T LT++H + QLCLLAKC+K L L+ D+ +I N D F
Sbjct: 122 GILKQAIDKMQMNTNQLTSVHADLCQLCLLAKCFKPALPYLDVDMMDICKENGAYDAKHF 181
Query: 177 FLYCYYGGMIFIGQKRFRKALELLHNVVTAPMSSINAIAVEAYKKYILVSLIHHGQFSST 236
Y YYGGMI+ G K F +AL +T P +++ I +E+YKKYILVSLI G+
Sbjct: 182 LCYYYYGGMIYTGLKNFERALYFYEQAITTPAMAVSHIMLESYKKYILVSLILLGKVQQ- 240
Query: 237 LPKYTSSAAQRNLKNFSQPYMELVNTYNTGKIVELETYVQTNREKFESDNNLGLVKQVVS 296
LPKYTS R +K S Y EL Y+T EL V + E F DNN+GLVKQ +S
Sbjct: 241 LPKYTSQIVGRFIKPLSNAYHELAQVYSTNNPSELRNLVSKHSETFTRDNNMGLVKQCLS 300
Query: 297 SMYKRNIQRLTQTYLTLSLQDIANTVQLNSSKEAEMHVLQMIQDGEIFATINQKDGMVRF 356
S+YK+NIQRLT+T+LTLSLQD+A+ VQL+ +EAE +VL MI+DGEIFA+INQKDGMV F
Sbjct: 301 SLYKKNIQRLTKTFLTLSLQDMASRVQLSGPQEAEKYVLHMIEDGEIFASINQKDGMVSF 360
Query: 357 LEDPEQYKTCEMIEHIDSSIQRIMSLSKKLTAMDELISCDPLYLGKA 403
++PE+Y M+ +ID + + + L ++L AMD+ I+ +P ++ K+
Sbjct: 361 HDNPEKYNNPAMLHNIDQEMLKCIELDERLKAMDQEITVNPQFVQKS 407
>RGD|1303002 [details] [associations]
symbol:Cops3 "COP9 signalosome subunit 3" species:10116 "Rattus
norvegicus" [GO:0001701 "in utero embryonic development"
evidence=IEA;ISO] [GO:0005634 "nucleus" evidence=ISO] [GO:0005737
"cytoplasm" evidence=IEA;ISO] [GO:0008180 "signalosome"
evidence=IEA;ISO] [GO:0010388 "cullin deneddylation"
evidence=IEA;ISO] InterPro:IPR000717 Pfam:PF01399 SMART:SM00088
RGD:1303002 GO:GO:0005737 GO:GO:0001701 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0008180 GO:GO:0010388 eggNOG:NOG249849
HOGENOM:HOG000030451 KO:K12177 OMA:DRALYFF CTD:8533
GeneTree:ENSGT00490000043408 HOVERGEN:HBG051135 OrthoDB:EOG49KFQJ
EMBL:BC079143 IPI:IPI00200828 RefSeq:NP_001004200.1 UniGene:Rn.3963
ProteinModelPortal:Q68FW9 STRING:Q68FW9 PhosphoSite:Q68FW9
PRIDE:Q68FW9 Ensembl:ENSRNOT00000004438 GeneID:287367
KEGG:rno:287367 UCSC:RGD:1303002 InParanoid:Q68FW9 NextBio:625967
Genevestigator:Q68FW9 Uniprot:Q68FW9
Length = 423
Score = 774 (277.5 bits), Expect = 7.1e-77, P = 7.1e-77
Identities = 169/407 (41%), Positives = 248/407 (60%)
Query: 3 SIENLVTQIQGLSSNASDITALKDYLKAAEDLLRSESTRLLSFLDQLDPSKHSLGYLYFL 62
++E V ++ LS+ +T L + + + +LL + L + L LD +HSLG L L
Sbjct: 4 ALEQFVNSVRQLSAQGQ-MTQLCELINKSGELLAKNLSHLDTVLGALDVQEHSLGVLAVL 62
Query: 63 EPCMYCSITKERANTLVPIIARFITSCSAEQIRYVPEKFINVCKRYKDQVLLLEAPIRGV 122
+ + TL + FI++C+ E IRY + F +C + + ++ + P+RG+
Sbjct: 63 F-VKFSMPSVPDFETLFSQVQLFISTCNGEHIRYATDTFAGLCHQLTNALVERKQPLRGI 121
Query: 123 GPMLTAIRKIQSSTEHLTTLHPEFLQLCLLAKCYKAGLSVLEDDIYEI---NLPRD---F 176
G + AI K+Q +T LT++H + QLCLLAKC+K L L+ D+ +I N D F
Sbjct: 122 GILKQAIDKMQMNTNQLTSVHADLCQLCLLAKCFKPALPYLDVDMMDICKENGAYDAKHF 181
Query: 177 FLYCYYGGMIFIGQKRFRKALELLHNVVTAPMSSINAIAVEAYKKYILVSLIHHGQFSST 236
Y YYGGMI+ G K F +AL +T P +++ I +E+YKKYILVSLI G+
Sbjct: 182 LCYYYYGGMIYTGLKNFERALYFYEQAITTPAMAVSHIMLESYKKYILVSLILLGKVQQ- 240
Query: 237 LPKYTSSAAQRNLKNFSQPYMELVNTYNTGKIVELETYVQTNREKFESDNNLGLVKQVVS 296
LPKYTS R +K S Y EL Y+T EL V + E F DNN+GLVKQ +S
Sbjct: 241 LPKYTSQIVGRFIKPLSNAYHELAQVYSTNNPSELRNLVNKHSETFTRDNNMGLVKQCLS 300
Query: 297 SMYKRNIQRLTQTYLTLSLQDIANTVQLNSSKEAEMHVLQMIQDGEIFATINQKDGMVRF 356
S+YK+NIQRLT+T+LTLSLQD+A+ VQL+ +EAE +VL MI+DGEIFA+INQKDGMV F
Sbjct: 301 SLYKKNIQRLTKTFLTLSLQDMASRVQLSGPQEAEKYVLHMIEDGEIFASINQKDGMVSF 360
Query: 357 LEDPEQYKTCEMIEHIDSSIQRIMSLSKKLTAMDELISCDPLYLGKA 403
++PE+Y M+ +ID + + + L ++L AMD+ I+ +P ++ K+
Sbjct: 361 HDNPEKYNNPAMLHNIDQEMLKCIELDERLKAMDQEITVNPQFVQKS 407
>UNIPROTKB|A6H7B5 [details] [associations]
symbol:COPS3 "COP9 signalosome complex subunit 3"
species:9913 "Bos taurus" [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0010388 "cullin deneddylation" evidence=IEA] [GO:0008180
"signalosome" evidence=IEA] [GO:0001701 "in utero embryonic
development" evidence=IEA] InterPro:IPR000717 Pfam:PF01399
SMART:SM00088 GO:GO:0005737 GO:GO:0001701 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0008180 GO:GO:0010388 eggNOG:NOG249849
HOGENOM:HOG000030451 KO:K12177 OMA:DRALYFF EMBL:BC146183
IPI:IPI00695994 RefSeq:NP_001092374.1 UniGene:Bt.3232
ProteinModelPortal:A6H7B5 STRING:A6H7B5 PRIDE:A6H7B5
Ensembl:ENSBTAT00000025255 GeneID:507932 KEGG:bta:507932 CTD:8533
GeneTree:ENSGT00490000043408 HOVERGEN:HBG051135 InParanoid:A6H7B5
OrthoDB:EOG49KFQJ NextBio:20868278 Uniprot:A6H7B5
Length = 423
Score = 772 (276.8 bits), Expect = 1.1e-76, P = 1.1e-76
Identities = 168/407 (41%), Positives = 249/407 (61%)
Query: 3 SIENLVTQIQGLSSNASDITALKDYLKAAEDLLRSESTRLLSFLDQLDPSKHSLGYLYFL 62
++E V ++ LS+ +T L + + + +LL + L + L LD +HSLG L L
Sbjct: 4 ALEQFVNSVRQLSAQGQ-MTQLCELINKSGELLAKNLSHLDTVLGALDVQEHSLGVLAVL 62
Query: 63 EPCMYCSITKERANTLVPIIARFITSCSAEQIRYVPEKFINVCKRYKDQVLLLEAPIRGV 122
+ + TL + FI++C+ E IRY + F +C + + ++ + P+RG+
Sbjct: 63 F-VKFSMPSVPDFETLFSQVQLFISTCNGEHIRYATDTFAGLCHQLTNALVERKQPLRGI 121
Query: 123 GPMLTAIRKIQSSTEHLTTLHPEFLQLCLLAKCYKAGLSVLEDDIYEI---NLPRD---F 176
G + AI K+Q +T LT++H + QLCLLAKC+K L L+ D+ +I N D F
Sbjct: 122 GVLRQAIDKMQMNTNQLTSVHADLCQLCLLAKCFKPALPYLDVDMVDICKENGAYDAKHF 181
Query: 177 FLYCYYGGMIFIGQKRFRKALELLHNVVTAPMSSINAIAVEAYKKYILVSLIHHGQFSST 236
Y YYGGM++ G K F +AL +T P +++ I +E+YKKYILVSLI G+
Sbjct: 182 LCYYYYGGMVYTGLKNFERALYFYEQAITTPAMAVSHIMLESYKKYILVSLILLGKVQQ- 240
Query: 237 LPKYTSSAAQRNLKNFSQPYMELVNTYNTGKIVELETYVQTNREKFESDNNLGLVKQVVS 296
LPKYTS R +K S Y EL Y+T EL + V + E F DNN+GLVKQ +S
Sbjct: 241 LPKYTSQIVGRFIKPLSNAYHELAQVYSTNNPSELRSLVTKHSEIFTRDNNMGLVKQCLS 300
Query: 297 SMYKRNIQRLTQTYLTLSLQDIANTVQLNSSKEAEMHVLQMIQDGEIFATINQKDGMVRF 356
S+YK+NIQRLT+T+LTLSLQD+A+ VQL+ +EAE +VL MI+DGEIFA+INQKDGMV F
Sbjct: 301 SLYKKNIQRLTKTFLTLSLQDMASRVQLSGPQEAEKYVLHMIEDGEIFASINQKDGMVSF 360
Query: 357 LEDPEQYKTCEMIEHIDSSIQRIMSLSKKLTAMDELISCDPLYLGKA 403
++PE+Y M+ +ID + + + L ++L AMD+ I+ +P ++ K+
Sbjct: 361 HDNPEKYNNPAMLHNIDQEMLKCIELDERLKAMDQEITVNPQFVQKS 407
>UNIPROTKB|Q5ZJF1 [details] [associations]
symbol:COPS3 "COP9 signalosome complex subunit 3"
species:9031 "Gallus gallus" [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0001701 "in utero embryonic development" evidence=IEA]
[GO:0008180 "signalosome" evidence=IEA] [GO:0010388 "cullin
deneddylation" evidence=IEA] InterPro:IPR000717 Pfam:PF01399
SMART:SM00088 GO:GO:0005737 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0008180 GO:GO:0010388 eggNOG:NOG249849 HOGENOM:HOG000030451
KO:K12177 OMA:DRALYFF CTD:8533 GeneTree:ENSGT00490000043408
HOVERGEN:HBG051135 OrthoDB:EOG49KFQJ EMBL:AJ720483 IPI:IPI00599251
RefSeq:NP_001006163.1 UniGene:Gga.31710 ProteinModelPortal:Q5ZJF1
STRING:Q5ZJF1 PRIDE:Q5ZJF1 Ensembl:ENSGALT00000007721 GeneID:416504
KEGG:gga:416504 InParanoid:Q5ZJF1 NextBio:20819948 Uniprot:Q5ZJF1
Length = 423
Score = 771 (276.5 bits), Expect = 1.5e-76, P = 1.5e-76
Identities = 169/407 (41%), Positives = 248/407 (60%)
Query: 3 SIENLVTQIQGLSSNASDITALKDYLKAAEDLLRSESTRLLSFLDQLDPSKHSLGYLYFL 62
++E V ++ LS+ +T L + + + +LL + L + L LD +HSLG L L
Sbjct: 4 ALEQFVNSVRQLSAQGQ-MTQLCELINKSGELLAKNLSHLDTVLGALDVQEHSLGVLAVL 62
Query: 63 EPCMYCSITKERANTLVPIIARFITSCSAEQIRYVPEKFINVCKRYKDQVLLLEAPIRGV 122
+ + TL + FI++C+ E IRY + F +C + + ++ + P+RG+
Sbjct: 63 F-VKFSMPSIPDFETLFSQVQLFISTCNGEHIRYATDTFAGLCHQLTNALVERKQPLRGI 121
Query: 123 GPMLTAIRKIQSSTEHLTTLHPEFLQLCLLAKCYKAGLSVLEDDIYEI---NLPRD---F 176
+ AI K+Q +T LT++H + QLCLLAKC+K L L+ D+ +I N D F
Sbjct: 122 SILRQAIDKMQMNTNQLTSIHADLCQLCLLAKCFKPALPYLDVDMMDICKENGAYDAKHF 181
Query: 177 FLYCYYGGMIFIGQKRFRKALELLHNVVTAPMSSINAIAVEAYKKYILVSLIHHGQFSST 236
Y YYGGMI+ G K F +AL +T P +++ I +E+YKKYILVSLI G+
Sbjct: 182 LCYYYYGGMIYTGLKNFERALYFYEQAITTPAMAVSHIMLESYKKYILVSLILLGKVQQ- 240
Query: 237 LPKYTSSAAQRNLKNFSQPYMELVNTYNTGKIVELETYVQTNREKFESDNNLGLVKQVVS 296
LPKYTS R +K S Y EL Y+T K EL V + E F DNN+GLVKQ +S
Sbjct: 241 LPKYTSQIVGRFIKPLSNAYHELAQVYSTNKPSELRNLVNKHSETFTRDNNMGLVKQCLS 300
Query: 297 SMYKRNIQRLTQTYLTLSLQDIANTVQLNSSKEAEMHVLQMIQDGEIFATINQKDGMVRF 356
S+YK+NIQRLT+T+LTLSLQD+A+ VQL+ +EAE +VL MI+DGEIFA+INQKDGMV F
Sbjct: 301 SLYKKNIQRLTKTFLTLSLQDMASRVQLSGPQEAEKYVLHMIEDGEIFASINQKDGMVCF 360
Query: 357 LEDPEQYKTCEMIEHIDSSIQRIMSLSKKLTAMDELISCDPLYLGKA 403
++PE+Y M+ +ID + + + L ++L AMD+ I+ +P ++ K+
Sbjct: 361 HDNPEKYNNPAMLHNIDQEMLKCIELDERLKAMDQEITVNPQFVQKS 407
>UNIPROTKB|E2RD70 [details] [associations]
symbol:COPS3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0010388 "cullin deneddylation" evidence=IEA]
[GO:0008180 "signalosome" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0001701 "in utero embryonic development"
evidence=IEA] InterPro:IPR000717 Pfam:PF01399 SMART:SM00088
GO:GO:0005737 GO:GO:0001701 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0008180 GO:GO:0010388 KO:K12177 OMA:DRALYFF CTD:8533
GeneTree:ENSGT00490000043408 EMBL:AAEX03003732 RefSeq:XP_864801.2
ProteinModelPortal:E2RD70 Ensembl:ENSCAFT00000029331 GeneID:479528
KEGG:cfa:479528 NextBio:20854700 Uniprot:E2RD70
Length = 423
Score = 769 (275.8 bits), Expect = 2.4e-76, P = 2.4e-76
Identities = 168/407 (41%), Positives = 247/407 (60%)
Query: 3 SIENLVTQIQGLSSNASDITALKDYLKAAEDLLRSESTRLLSFLDQLDPSKHSLGYLYFL 62
++E V ++ LS+ +T L + + + +LL + L + L LD +HSLG L L
Sbjct: 4 ALEQFVNSVRQLSAQGQ-MTQLCELINKSGELLAKNLSHLDTVLGALDVQEHSLGVLAVL 62
Query: 63 EPCMYCSITKERANTLVPIIARFITSCSAEQIRYVPEKFINVCKRYKDQVLLLEAPIRGV 122
+ + TL + FI++C+ E IRY + F +C + + ++ + P+RG+
Sbjct: 63 F-VKFSMPSVPDFETLFSQVQLFISTCNGEHIRYATDTFAGLCHQLTNALVERKQPLRGI 121
Query: 123 GPMLTAIRKIQSSTEHLTTLHPEFLQLCLLAKCYKAGLSVLEDDIYEI---NLPRD---F 176
+ AI K+Q +T LT++H + QLCLLAKC+K L L+ D+ +I N D F
Sbjct: 122 SILKQAIDKMQMNTNQLTSIHADLCQLCLLAKCFKPALPYLDVDMMDICKENGAYDAKHF 181
Query: 177 FLYCYYGGMIFIGQKRFRKALELLHNVVTAPMSSINAIAVEAYKKYILVSLIHHGQFSST 236
Y YYGGMI+ G K F +AL +T P +++ I +E+YKKYILVSLI G+
Sbjct: 182 LCYYYYGGMIYTGLKNFERALYFYEQAITTPAMAVSHIMLESYKKYILVSLILLGKVQQ- 240
Query: 237 LPKYTSSAAQRNLKNFSQPYMELVNTYNTGKIVELETYVQTNREKFESDNNLGLVKQVVS 296
LPKYTS R +K S Y EL Y+T EL V + E F DNN+GLVKQ +S
Sbjct: 241 LPKYTSQIVGRFIKPLSNAYHELAQVYSTNNPSELRNLVNKHSETFTRDNNMGLVKQCLS 300
Query: 297 SMYKRNIQRLTQTYLTLSLQDIANTVQLNSSKEAEMHVLQMIQDGEIFATINQKDGMVRF 356
S+YK+NIQRLT+T+LTLSLQD+A+ VQL+ +EAE +VL MI+DGEIFA+INQKDGMV F
Sbjct: 301 SLYKKNIQRLTKTFLTLSLQDMASRVQLSGPQEAEKYVLHMIEDGEIFASINQKDGMVSF 360
Query: 357 LEDPEQYKTCEMIEHIDSSIQRIMSLSKKLTAMDELISCDPLYLGKA 403
++PE+Y M+ +ID + + + L ++L AMD+ I+ +P ++ K+
Sbjct: 361 HDNPEKYNNPAMLHNIDQEMLKCIELDERLKAMDQEITVNPQFVQKS 407
>UNIPROTKB|F1SB16 [details] [associations]
symbol:COPS3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0010388 "cullin deneddylation" evidence=IEA]
[GO:0008180 "signalosome" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0001701 "in utero embryonic development"
evidence=IEA] InterPro:IPR000717 Pfam:PF01399 SMART:SM00088
GO:GO:0005737 GO:GO:0001701 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0008180 GO:GO:0010388 KO:K12177 OMA:DRALYFF CTD:8533
GeneTree:ENSGT00490000043408 EMBL:CU927962 RefSeq:NP_001231078.1
UniGene:Ssc.11099 Ensembl:ENSSSCT00000019646 GeneID:100512312
KEGG:ssc:100512312 Uniprot:F1SB16
Length = 423
Score = 768 (275.4 bits), Expect = 3.1e-76, P = 3.1e-76
Identities = 167/407 (41%), Positives = 246/407 (60%)
Query: 3 SIENLVTQIQGLSSNASDITALKDYLKAAEDLLRSESTRLLSFLDQLDPSKHSLGYLYFL 62
++E V ++ LS+ +T L + + + +LL + L + L LD +HSLG L L
Sbjct: 4 ALEQFVNSVRQLSAQGQ-MTQLCELINKSGELLAKNLSHLDTVLGALDVQEHSLGVLAVL 62
Query: 63 EPCMYCSITKERANTLVPIIARFITSCSAEQIRYVPEKFINVCKRYKDQVLLLEAPIRGV 122
+ + TL FI++C+ E IRY + F +C + + ++ + P+RG+
Sbjct: 63 F-VKFSMPSAPDFETLFSQAQLFISACNGEHIRYATDTFAGLCHQLTNALVERKQPLRGI 121
Query: 123 GPMLTAIRKIQSSTEHLTTLHPEFLQLCLLAKCYKAGLSVLEDDIYEINLP------RDF 176
G + AI K+Q S LT++H + QLCLLAKC+K L L+ D+ +I R F
Sbjct: 122 GVLKQAIDKMQMSANQLTSVHADLCQLCLLAKCFKPALPYLDVDMVDICKENGAYDARHF 181
Query: 177 FLYCYYGGMIFIGQKRFRKALELLHNVVTAPMSSINAIAVEAYKKYILVSLIHHGQFSST 236
Y YYGGM++ G K F +AL +T P +++ I +E+YKKYILVSLI G+
Sbjct: 182 LCYYYYGGMVYTGLKNFERALYFYEQAITTPAMAVSHIMLESYKKYILVSLILLGKVQQ- 240
Query: 237 LPKYTSSAAQRNLKNFSQPYMELVNTYNTGKIVELETYVQTNREKFESDNNLGLVKQVVS 296
LPKYTS R +K S Y EL Y+T EL T V + E F D+N+GLVKQ +S
Sbjct: 241 LPKYTSQIVGRFIKPLSNAYHELAQVYSTNSPSELRTLVNKHSETFVRDSNMGLVKQCLS 300
Query: 297 SMYKRNIQRLTQTYLTLSLQDIANTVQLNSSKEAEMHVLQMIQDGEIFATINQKDGMVRF 356
S+YK+NIQRLT+T+LTLSLQD+A+ VQL+ +EAE +VL MI+DGEIFA+INQKDGMV F
Sbjct: 301 SLYKKNIQRLTKTFLTLSLQDMASRVQLSGPQEAEKYVLHMIEDGEIFASINQKDGMVSF 360
Query: 357 LEDPEQYKTCEMIEHIDSSIQRIMSLSKKLTAMDELISCDPLYLGKA 403
++PE+Y M++ ID + + + L ++L AMD+ I+ +P ++ K+
Sbjct: 361 HDNPEKYNNPAMLQSIDQEMLKCIELDERLKAMDQEITVNPQFVQKS 407
>ZFIN|ZDB-GENE-030131-7660 [details] [associations]
symbol:cops3 "COP9 constitutive photomorphogenic
homolog subunit 3" species:7955 "Danio rerio" [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0008180
"signalosome" evidence=IEA] InterPro:IPR000717 Pfam:PF01399
SMART:SM00088 ZFIN:ZDB-GENE-030131-7660 GO:GO:0005737
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0008180
HOGENOM:HOG000030451 KO:K12177 CTD:8533 HOVERGEN:HBG051135
EMBL:BC045415 EMBL:BC064288 IPI:IPI00484908 RefSeq:NP_955979.1
UniGene:Dr.120979 ProteinModelPortal:Q6P2U9 PRIDE:Q6P2U9
GeneID:335720 KEGG:dre:335720 InParanoid:Q6P2U9 NextBio:20810996
Bgee:Q6P2U9 Uniprot:Q6P2U9
Length = 423
Score = 767 (275.1 bits), Expect = 3.9e-76, P = 3.9e-76
Identities = 169/407 (41%), Positives = 244/407 (59%)
Query: 3 SIENLVTQIQGLSSNASDITALKDYLKAAEDLLRSESTRLLSFLDQLDPSKHSLGYLYFL 62
++E V ++ LS+ +T L + + + +LL + L + L LD +HSLG L L
Sbjct: 4 ALEQFVNNVRQLSAQGQ-MTQLCELINKSGELLAKNLSHLDTVLGALDIQEHSLGVLAVL 62
Query: 63 EPCMYCSITKERANTLVPIIARFITSCSAEQIRYVPEKFINVCKRYKDQVLLLEAPIRGV 122
+ TL + FI++C+ E IRY + F +C + + ++ + P+RG+
Sbjct: 63 F-VKFSMPNIPDFETLFSQVQLFISTCNGEHIRYATDTFAGLCHQLTNALVERKQPLRGI 121
Query: 123 GPMLTAIRKIQSSTEHLTTLHPEFLQLCLLAKCYKAGLSVLEDDIYEI---NLPRD---F 176
+ AI K+Q +T LT++H + QLCLLAKC+K + LE D+ +I N D F
Sbjct: 122 SILKQAIDKMQMNTNQLTSVHADLCQLCLLAKCFKPAVPFLELDMMDICKENGAYDAKHF 181
Query: 177 FLYCYYGGMIFIGQKRFRKALELLHNVVTAPMSSINAIAVEAYKKYILVSLIHHGQFSST 236
Y YYGGMI+ G K F +AL +T P +++ I +EAYKKYILVSLI HG+
Sbjct: 182 LCYYYYGGMIYTGLKNFERALYFFEQAITTPAMAVSHIMLEAYKKYILVSLILHGKVQQ- 240
Query: 237 LPKYTSSAAQRNLKNFSQPYMELVNTYNTGKIVELETYVQTNREKFESDNNLGLVKQVVS 296
LPKYTS R +K S Y EL Y T EL V + E F DNN GLVKQ +S
Sbjct: 241 LPKYTSQIVGRFIKPLSNAYHELAQIYATNNPAELRALVNKHSETFTRDNNTGLVKQCLS 300
Query: 297 SMYKRNIQRLTQTYLTLSLQDIANTVQLNSSKEAEMHVLQMIQDGEIFATINQKDGMVRF 356
S+YK+NIQRLT+T+LTLSLQD+A+ VQL+ +EAE +VL MI+DGEI+A+INQKDGMV F
Sbjct: 301 SLYKKNIQRLTKTFLTLSLQDMASRVQLSGPQEAEKYVLHMIEDGEIYASINQKDGMVCF 360
Query: 357 LEDPEQYKTCEMIEHIDSSIQRIMSLSKKLTAMDELISCDPLYLGKA 403
++PE+Y M+ ID + + + L +KL +MD+ I+ +P ++ K+
Sbjct: 361 HDNPEKYNNPAMLHKIDQEMLKCIELDEKLKSMDQEITVNPQFVQKS 407
>DICTYBASE|DDB_G0291848 [details] [associations]
symbol:csn3 "proteasome component region PCI (PINT)
domain-containing protein" species:44689 "Dictyostelium discoideum"
[GO:0008180 "signalosome" evidence=IEA;ISS;IPI] [GO:0005515
"protein binding" evidence=IPI] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000717 Pfam:PF01399 SMART:SM00088
dictyBase:DDB_G0291848 GO:GO:0005737 GenomeReviews:CM000155_GR
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0008180 eggNOG:NOG249849
KO:K12177 OMA:DRALYFF EMBL:DQ309431 EMBL:AAFI02000185
RefSeq:XP_629934.1 ProteinModelPortal:Q54E53 STRING:Q54E53
EnsemblProtists:DDB0233101 GeneID:8628339 KEGG:ddi:DDB_G0291848
ProtClustDB:CLSZ2497092 Uniprot:Q54E53
Length = 418
Score = 677 (243.4 bits), Expect = 1.3e-66, P = 1.3e-66
Identities = 156/387 (40%), Positives = 223/387 (57%)
Query: 24 LKDYLKAAEDLLRSESTRLLSFLDQLDPSKHSLGYLYFLEPCMYCSITKERANTLVPIIA 83
LK+ LK E L R + L + L LD HSLG L L+ K R+ +
Sbjct: 16 LKNLLKYEEQLER-QHVSLDNILGALDVRNHSLGQLLVLK-AKGSDQGKNRS-VFIDQCN 72
Query: 84 RFITSCSAEQIRYVPEKFINVCKRYKDQVLLLEAPIRGVGPMLTAIRKIQSS--TEHLTT 141
F +C+ EQ+R P + + K Y + + L+ PIRGV + A+ + + T LT
Sbjct: 73 NFFRNCNVEQVRLAPAQLSQLSKFYTEALYELKQPIRGVAVLKDALNILSDNKPTTTLTP 132
Query: 142 LHPEFLQLCLLAKCYKAGLSVLEDDIYEINLP------RDFFLYCYYGGMIFIGQKRFRK 195
+H +FLQLC+L+KCY L ++E +I IN +D Y YY G+IF K+++K
Sbjct: 133 IHTDFLQLCILSKCYHQALPLIESNITHINPEQSSIAIKDILCYFYYSGIIFTAFKKYKK 192
Query: 196 ALELLHNVVTAPMSSINAIAVEAYKKYILVSLIHHGQFSSTLPKYTSSAAQRNLKNFSQP 255
A+E V+TAP S+++AI VEAYKKY++V LI G PK T + QRN+K+ +P
Sbjct: 193 AIEAFKFVITAPASALSAITVEAYKKYLIVYLIQFGSVQH-FPKCTPAVVQRNIKSHCKP 251
Query: 256 YMELVNTYNTGKIVELETYVQTNREKFESDNNLGLVKQVVSSMYKRNIQRLTQTYLTLSL 315
Y E V +++ G I ++ + E F+ D+N GLVK + S Y+RNI++LTQT++TLS+
Sbjct: 252 YTEFVQSFSNGNINDIMNKASSGAEFFQKDSNWGLVKLSIKSTYRRNIKKLTQTFMTLSI 311
Query: 316 QDIANTVQLNSSKEAEMHVLQMIQDGEIFATINQKDGMVRFLEDPEQYKTCEMIEHIDSS 375
DIA V L +K AE VL+MI++GEIFATINQKDGMV F E E + ++ +D +
Sbjct: 312 NDIAEKVSLPKAK-AEQFVLKMIEEGEIFATINQKDGMVTFDECFEDFSGPTILNDLDRN 370
Query: 376 IQRIMSLSKKLTAMDELISCDPLYLGK 402
I I+ L K+ MDE IS YL K
Sbjct: 371 INNIVGLESKIKEMDEKISLSNNYLKK 397
>FB|FBgn0027055 [details] [associations]
symbol:CSN3 "COP9 complex homolog subunit 3" species:7227
"Drosophila melanogaster" [GO:0008180 "signalosome"
evidence=ISS;NAS] [GO:0050821 "protein stabilization" evidence=IMP]
[GO:0007095 "mitotic G2 DNA damage checkpoint" evidence=IGI]
[GO:0046331 "lateral inhibition" evidence=IMP] InterPro:IPR000717
Pfam:PF01399 SMART:SM00088 GO:GO:0007275 GO:GO:0005737
GO:GO:0007095 GO:GO:0050821 EMBL:AE014296 GO:GO:0048477
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0046331 GO:GO:0008180
CTD:1448 GO:GO:0000338 GO:GO:0019781 eggNOG:NOG249849 KO:K12177
OMA:DRALYFF GeneTree:ENSGT00490000043408 EMBL:AF129081
EMBL:AY071575 RefSeq:NP_524190.2 UniGene:Dm.5855
ProteinModelPortal:Q8SYG2 IntAct:Q8SYG2 MINT:MINT-278777
STRING:Q8SYG2 PaxDb:Q8SYG2 EnsemblMetazoa:FBtr0078269 GeneID:40308
KEGG:dme:Dmel_CG18332 FlyBase:FBgn0027055 InParanoid:Q8SYG2
OrthoDB:EOG4JQ2CW PhylomeDB:Q8SYG2 GenomeRNAi:40308 NextBio:818125
Bgee:Q8SYG2 GermOnline:CG18332 Uniprot:Q8SYG2
Length = 445
Score = 506 (183.2 bits), Expect = 1.8e-48, P = 1.8e-48
Identities = 115/303 (37%), Positives = 174/303 (57%)
Query: 102 INVCKRYKDQVLLLEAPIRGVGPMLTAIR-KIQSSTEHLTTLHPEFLQLCLLAKCYKAGL 160
I + R DQ+ LE + + L + K ++ + L L + + +A K
Sbjct: 123 IRIISRAIDQIRQLETQLTPIHADLCLLSLKAKNFSVVLPYLDADITDISTVAAECKTQQ 182
Query: 161 SVLEDDIYEINLPRDFFLYCYYGGMIFIGQKRFRKALELLHNVVTAPMSSINAIAVEAYK 220
N + F LY YYGGMI+ K + +AL +T P +++ I +EAYK
Sbjct: 183 QQQSQHADANNDAKYFLLYFYYGGMIYTAVKNYERALYFFEVCITTPAMAMSHIMLEAYK 242
Query: 221 KYILVSLIHHGQFSSTLPKYTSSAAQRNLKNFSQPYMELVNTYNTGKIVELETYVQTNRE 280
K+++VSLI G+ + +PK T R +K + Y +LVN Y EL + E
Sbjct: 243 KFLMVSLIVEGKIAY-IPKNTQVIG-RFMKPMANHYHDLVNVYANSSSEELRIIILKYSE 300
Query: 281 KFESDNNLGLVKQVVSSMYKRNIQRLTQTYLTLSLQDIANTVQLNSSKEAEMHVLQMIQD 340
F DNN+GL KQV +S+YKRNIQRLT+T+LTLSL D+A+ VQL S+ EAE ++L MI+
Sbjct: 301 AFTRDNNMGLAKQVATSLYKRNIQRLTKTFLTLSLSDVASRVQLASAVEAERYILNMIKS 360
Query: 341 GEIFATINQKDGMVRFLEDPEQYKTCEMIEHIDSSIQRIMSLSKKLTAMDELISCDPLYL 400
GEI+A+INQKDGMV F +DPE+Y + EM ++ ++I ++ +++ M+E I +P+Y+
Sbjct: 361 GEIYASINQKDGMVLFKDDPEKYNSPEMFLNVQNNITHVLDQVRQINKMEEEIILNPMYV 420
Query: 401 GKA 403
KA
Sbjct: 421 KKA 423
Score = 161 (61.7 bits), Expect = 8.6e-09, P = 8.6e-09
Identities = 49/170 (28%), Positives = 83/170 (48%)
Query: 3 SIENLVTQIQGLSSNASDITALKDYLKAAEDLLRSESTRLLSFLDQLDPSKHSLGYLYFL 62
++EN V Q++ LS++ S L + L + LL + L + L+ LD +HSLG LY L
Sbjct: 4 ALENYVNQVRTLSASGS-YRELAEELPESLSLLARNWSILDNVLETLDMQQHSLGVLYVL 62
Query: 63 EPCMYCSITKERANT-LVPIIARFITSCSAEQIRYVPEKFINVCKRYKDQVLLLEAPIRG 121
++ + T L+ ++ F+ + EQ+RY F C + + V+ I G
Sbjct: 63 LAKLHSASTANPEPVQLIQLMRDFVQRNNNEQLRYAVCAFYETCHLFTEFVVQKNLSILG 122
Query: 122 VGPMLTAIRKIQSSTEHLTTLHPEFLQLCLLAKCYKAGLSVLEDDIYEIN 171
+ + AI +I+ LT +H + L L AK + L L+ DI +I+
Sbjct: 123 IRIISRAIDQIRQLETQLTPIHADLCLLSLKAKNFSVVLPYLDADITDIS 172
>ASPGD|ASPL0000007455 [details] [associations]
symbol:csnC species:162425 "Emericella nidulans"
[GO:0008180 "signalosome" evidence=IDA] [GO:0070791 "cleistothecium
development" evidence=IPI] [GO:0003674 "molecular_function"
evidence=ND] GO:GO:0005737 EMBL:BN001301 EMBL:AACD01000100
GO:GO:0008180 eggNOG:NOG249849 KO:K12177 RefSeq:XP_663402.1
STRING:Q5B0Y2 EnsemblFungi:CADANIAT00007250 GeneID:2870947
KEGG:ani:AN5798.2 HOGENOM:HOG000213404 OMA:YATINQR
OrthoDB:EOG42859W Uniprot:Q5B0Y2
Length = 496
Score = 221 (82.9 bits), Expect = 3.7e-21, Sum P(2) = 3.7e-21
Identities = 61/214 (28%), Positives = 108/214 (50%)
Query: 168 YEINLP-RDFFLYCYYGGMIFIGQKRFRKALELLHNVVTAPMS-SINAIAVEAYKKYILV 225
+ NL RD + Y GM+++ K++ +A L V++AP + S++ I VEAYKK++L
Sbjct: 215 FSANLTYRDHLQFYMYSGMVYMALKKWDQASHCLGIVISAPTANSVSKIMVEAYKKWVLA 274
Query: 226 SLIHHGQFSSTLPKYTSSAAQRNLKNFSQPYMELVNTYNTGKIVELETYVQTNREKFESD 285
+L+ HG+ S +P + R ++ S+PY+ L + L T + + + +D
Sbjct: 275 NLLGHGKLFS-VPNLVAPHVTRVYQSLSKPYISLAEAFEKRDFQRLRTEISLGQTIWRAD 333
Query: 286 NNLGLVKQVVSSMYKRNIQRLTQTYLTLSLQDIANTVQLNS--SKEAEMHVLQMIQDGEI 343
N GLV QV + K I +L +T+ L++ D+ S S++ E V+ ++ E+
Sbjct: 334 KNSGLVYQVFEAYDKFLIIKLGKTFSALTMPDVLQRASSCSKGSRDIEEFVVSLVMTKEL 393
Query: 344 FATINQKDG-----MVRFLEDPEQYKTCEMIEHI 372
A ++ G M+RF + + E EHI
Sbjct: 394 RAKLSHSPGNETTTMLRFPLSSQSHALRE--EHI 425
Score = 95 (38.5 bits), Expect = 3.7e-21, Sum P(2) = 3.7e-21
Identities = 35/130 (26%), Positives = 61/130 (46%)
Query: 45 FLDQLDPSKHSLGYLYFLEPCMYCSITKERA----NTLVP------IIARFITSCSAEQI 94
+L+ + P+ HSL YLY L + + ++ A N L P +F+ S QI
Sbjct: 52 YLEAISPAVHSLSYLYLLRIRIQ-QLQEKTAVGVPNDLQPGGTLWNQTVKFLRSFDPIQI 110
Query: 95 RYVPEKFINVCKRYKDQVLLLEAPIRGVGPMLTAIRKIQSSTEHLTTLHPEFLQLCLLAK 154
RYV ++ + + L + PI V + A+ ++ ++ T+LH ++L LL+
Sbjct: 111 RYVGHEWRELVDSVANAALSVSKPILAVKMIRDALERLNTAGV-FTSLHLMLVKLALLSS 169
Query: 155 CYKAGLSVLE 164
Y L VL+
Sbjct: 170 SYTYVLPVLD 179
>ZFIN|ZDB-GENE-040426-1444 [details] [associations]
symbol:psmd3 "proteasome (prosome, macropain) 26S
subunit, non-ATPase, 3" species:7955 "Danio rerio" [GO:0030234
"enzyme regulator activity" evidence=IEA] [GO:0042176 "regulation
of protein catabolic process" evidence=IEA] [GO:0000502 "proteasome
complex" evidence=IEA] InterPro:IPR000717 InterPro:IPR011990
InterPro:IPR013586 Pfam:PF01399 Pfam:PF08375 SMART:SM00088
ZFIN:ZDB-GENE-040426-1444 GO:GO:0030234 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0050790 Gene3D:1.25.40.10 GO:GO:0000502
GO:GO:0042176 InterPro:IPR013143 SMART:SM00753 HOGENOM:HOG000193909
KO:K03033 CTD:5709 GeneTree:ENSGT00490000043406 HOVERGEN:HBG000703
EMBL:FP017234 EMBL:BC056598 EMBL:BC066451 IPI:IPI00507046
RefSeq:NP_956866.1 UniGene:Dr.13797 Ensembl:ENSDART00000027158
GeneID:393544 KEGG:dre:393544 InParanoid:Q6NYV1 NextBio:20814565
Uniprot:Q6NYV1
Length = 503
Score = 194 (73.4 bits), Expect = 2.3e-12, P = 2.3e-12
Identities = 56/190 (29%), Positives = 91/190 (47%)
Query: 179 YCYYGGMIFIGQKRFRKALELLHNVVT-APMSSINAIAVEAYKKYILVSLIHHGQFSSTL 237
Y YY G I Q + +A L N + AP + +K I+V L+ G+ L
Sbjct: 257 YLYYTGRIKAIQLEYSEARRTLTNALRKAPQHTAVGFKQTVHKLLIVVELLL-GEIPDRL 315
Query: 238 PKYTSSAAQRNLKNFSQPYMELVNTYNTGKIVELETYVQTNREKFESDNNLGLVKQVVSS 297
Q +LK PY L TG + + + EKF++D L+ ++ +
Sbjct: 316 -----QFRQPSLKRSLMPYFLLTQAVRTGNLAKFNQVLDQFGEKFQTDGTYTLIIRLRHN 370
Query: 298 MYKRNIQRLTQTYLTLSLQDIANTVQLNSSKEAEMHVLQMIQDGEIFATINQKDGMVRFL 357
+ K ++ ++ +Y +SL DIA +QL+S ++AE V + I+DG I A+IN + G V+
Sbjct: 371 VIKTGVRMISLSYSRISLADIAQKLQLDSPEDAEFIVAKAIRDGVIEASINHEKGFVQSK 430
Query: 358 EDPEQYKTCE 367
E + Y T E
Sbjct: 431 ETMDIYSTRE 440
>UNIPROTKB|B4DT72 [details] [associations]
symbol:PSMD3 "26S proteasome non-ATPase regulatory subunit
3" species:9606 "Homo sapiens" [GO:0030234 "enzyme regulator
activity" evidence=IEA] [GO:0042176 "regulation of protein
catabolic process" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] InterPro:IPR000717 InterPro:IPR013586 Pfam:PF01399
Pfam:PF08375 SMART:SM00088 GO:GO:0030234 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0050790 GO:GO:0000502 GO:GO:0042176
EMBL:AC090844 InterPro:IPR013143 SMART:SM00753 HOVERGEN:HBG000703
UniGene:Hs.12970 HGNC:HGNC:9560 ChiTaRS:PSMD3 EMBL:AK300081
IPI:IPI01014869 STRING:B4DT72 Ensembl:ENST00000541736
Uniprot:B4DT72
Length = 356
Score = 188 (71.2 bits), Expect = 4.3e-12, P = 4.3e-12
Identities = 55/190 (28%), Positives = 91/190 (47%)
Query: 179 YCYYGGMIFIGQKRFRKALELLHNVVT-APMSSINAIAVEAYKKYILVSLIHHGQFSSTL 237
Y YY G I Q + +A + N + AP + +K I+V L+ G+ L
Sbjct: 150 YLYYTGRIKAIQLEYSEARRTMTNALRKAPQHTAVGFKQTVHKLLIVVELLL-GEIPDRL 208
Query: 238 PKYTSSAAQRNLKNFSQPYMELVNTYNTGKIVELETYVQTNREKFESDNNLGLVKQVVSS 297
Q +LK PY L TG + + + EKF++D L+ ++ +
Sbjct: 209 -----QFRQPSLKRSLMPYFLLTQAVRTGNLAKFNQVLDQFGEKFQADGTYTLIIRLRHN 263
Query: 298 MYKRNIQRLTQTYLTLSLQDIANTVQLNSSKEAEMHVLQMIQDGEIFATINQKDGMVRFL 357
+ K ++ ++ +Y +SL DIA +QL+S ++AE V + I+DG I A+IN + G V+
Sbjct: 264 VIKTGVRMISLSYSRISLADIAQKLQLDSPEDAEFIVAKAIRDGVIEASINHEKGYVQSK 323
Query: 358 EDPEQYKTCE 367
E + Y T E
Sbjct: 324 EMIDIYSTRE 333
>UNIPROTKB|G4NAX6 [details] [associations]
symbol:MGG_00687 "Uncharacterized protein" species:242507
"Magnaporthe oryzae 70-15" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
EMBL:CM001235 KO:K12177 RefSeq:XP_003718322.1
EnsemblFungi:MGG_00687T0 GeneID:2675030 KEGG:mgr:MGG_00687
Uniprot:G4NAX6
Length = 497
Score = 161 (61.7 bits), Expect = 5.8e-12, Sum P(3) = 5.8e-12
Identities = 60/239 (25%), Positives = 107/239 (44%)
Query: 122 VGPML-TAIRKIQSSTEHLTTLHPEFLQLCLLAKCYKAGLSVLEDDIYEINLPRDFFL-Y 179
+GP L A ++I + P+ L LC L + +S +D + L L Y
Sbjct: 163 IGPALRVAAKRIVHYPGMINPPDPKSLILCDLRLPPSSYIS--QDTGFTTRLTALQVLEY 220
Query: 180 CYYGGMIFIGQKRFRKALELLHNVVTAPM--SSINAIAVEAYKKYILVSLIHHGQFSST- 236
+ G+++ + + A + P S ++ + +EA+KK++LVSL+ G+ ++
Sbjct: 221 DWLVGLLYCAARDWPAAQAAFARTASHPSRDSGVSKVMLEAFKKWVLVSLLAEGRITTPG 280
Query: 237 -LPKYTSSAAQRNLKNFSQPYMELVNTYNTGKIVELETYVQTNREKFESDNNLGLVKQVV 295
Y S A+ R ++PY + + + L V+ + ++F D N GLV +V+
Sbjct: 281 GFAPYISQASARTFGIMARPYAAVAKRFESADADALRLAVEVSSQQFAEDGNEGLVAEVL 340
Query: 296 SSMYKRNIQRLTQTYLTLSLQDI-ANT------VQLNSSKEAEMHVLQMIQDGEIFATI 347
S K I RL + Y +SL +I A T + S ++ + MI G + A I
Sbjct: 341 ESHQKWQIVRLREVYSKVSLAEINAKTKSAVTGAPVGSEEDMTQLIETMIDSGMLRAAI 399
Score = 62 (26.9 bits), Expect = 5.8e-12, Sum P(3) = 5.8e-12
Identities = 34/150 (22%), Positives = 60/150 (40%)
Query: 9 TQIQGLSSNASDITALKDYLKAAEDLLRSESTRL----LSFLDQLDPSKHSLGYLYFLEP 64
T+ + N A+K ++ L + S + LD L+P+ +SL YLY L
Sbjct: 13 TEEASTADNEKYNKAVKAHISNINSLFKERSAVIGDNAYKLLDLLNPAINSLSYLYLLAA 72
Query: 65 CM-----YCSITKERANTLVPIIARFITSCSAEQIRYVPEKFINVCKRYKDQVLLLEAPI 119
+ KE A ++ RF QIRY+ F ++ + ++ P
Sbjct: 73 LLPQGTKNAEYDKEFAERVILFFRRF----DPRQIRYMGVAFSDLFSATGRRNVM--PPT 126
Query: 120 RGVGPMLTAIRKIQSSTEHLTTLHPEFLQL 149
V + A+ ++ S LT+ H ++L
Sbjct: 127 IAVPILADALLRLDPSGSVLTSNHIFLMKL 156
Score = 49 (22.3 bits), Expect = 5.8e-12, Sum P(3) = 5.8e-12
Identities = 13/54 (24%), Positives = 25/54 (46%)
Query: 356 FLEDPEQYKTCEMIEHIDSSIQRIMSLSKKLTAMDELISCDPLYLGKAGRERQR 409
FL + E+ + I S++RI L A E ++ Y+ A ++++R
Sbjct: 418 FLAEEADITEQEVAQRIAQSVERIKQLGAVYNATKERLATSREYIRHAVKDQKR 471
>MGI|MGI:98858 [details] [associations]
symbol:Psmd3 "proteasome (prosome, macropain) 26S subunit,
non-ATPase, 3" species:10090 "Mus musculus" [GO:0000502 "proteasome
complex" evidence=IEA] [GO:0022624 "proteasome accessory complex"
evidence=IDA] [GO:0030234 "enzyme regulator activity" evidence=IEA]
[GO:0042176 "regulation of protein catabolic process" evidence=IEA]
InterPro:IPR000717 InterPro:IPR011990 InterPro:IPR013586
Pfam:PF01399 Pfam:PF08375 SMART:SM00088 MGI:MGI:98858 GO:GO:0030234
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0050790 EMBL:CH466556
Gene3D:1.25.40.10 GO:GO:0042176 EMBL:AL590963 InterPro:IPR013143
SMART:SM00753 GO:GO:0022624 eggNOG:NOG251646 HOGENOM:HOG000193909
KO:K03033 CTD:5709 GeneTree:ENSGT00490000043406 HOVERGEN:HBG000703
OMA:NQSVKAM OrthoDB:EOG4VHK6D ChiTaRS:PSMD3 EMBL:M25149
EMBL:AK145488 EMBL:AK164593 EMBL:AK165520 EMBL:AK166683
EMBL:AK166714 EMBL:AK167285 EMBL:AK169690 EMBL:BC003197
IPI:IPI00314439 PIR:I49504 RefSeq:NP_033465.1 UniGene:Mm.12194
ProteinModelPortal:P14685 IntAct:P14685 STRING:P14685
PhosphoSite:P14685 PaxDb:P14685 PRIDE:P14685
Ensembl:ENSMUST00000017365 GeneID:22123 KEGG:mmu:22123
InParanoid:Q3TP95 NextBio:301989 Bgee:P14685 Genevestigator:P14685
GermOnline:ENSMUSG00000017221 Uniprot:P14685
Length = 530
Score = 188 (71.2 bits), Expect = 1.2e-11, P = 1.2e-11
Identities = 55/190 (28%), Positives = 91/190 (47%)
Query: 179 YCYYGGMIFIGQKRFRKALELLHNVVT-APMSSINAIAVEAYKKYILVSLIHHGQFSSTL 237
Y YY G I Q + +A + N + AP + +K I+V L+ G+ L
Sbjct: 284 YLYYTGRIKAIQLEYSEARRTMTNALRKAPQHTAVGFKQTVHKLLIVVELLL-GEIPDRL 342
Query: 238 PKYTSSAAQRNLKNFSQPYMELVNTYNTGKIVELETYVQTNREKFESDNNLGLVKQVVSS 297
Q +LK PY L TG + + + EKF++D L+ ++ +
Sbjct: 343 -----QFRQPSLKRSLMPYFLLTQAVRTGNLAKFNQVLDQFGEKFQTDGTYTLIIRLRHN 397
Query: 298 MYKRNIQRLTQTYLTLSLQDIANTVQLNSSKEAEMHVLQMIQDGEIFATINQKDGMVRFL 357
+ K ++ ++ +Y +SL DIA +QL+S ++AE V + I+DG I A+IN + G V+
Sbjct: 398 VIKTGVRMISLSYSRISLADIAQKLQLDSPEDAEFIVAKAIRDGVIEASINHEKGYVQSK 457
Query: 358 EDPEQYKTCE 367
E + Y T E
Sbjct: 458 EMIDIYSTRE 467
>RGD|1311470 [details] [associations]
symbol:Psmd3 "proteasome (prosome, macropain) 26S subunit,
non-ATPase, 3" species:10116 "Rattus norvegicus" [GO:0022624
"proteasome accessory complex" evidence=IEA;ISO] [GO:0030234
"enzyme regulator activity" evidence=IEA] [GO:0042176 "regulation
of protein catabolic process" evidence=IEA] InterPro:IPR000717
InterPro:IPR011990 InterPro:IPR013586 Pfam:PF01399 Pfam:PF08375
SMART:SM00088 RGD:1311470 GO:GO:0030234 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0050790 Gene3D:1.25.40.10 GO:GO:0000502
GO:GO:0042176 EMBL:CH473948 InterPro:IPR013143 SMART:SM00753
eggNOG:NOG251646 HOGENOM:HOG000193909 KO:K03033 CTD:5709
GeneTree:ENSGT00490000043406 HOVERGEN:HBG000703 OMA:NQSVKAM
OrthoDB:EOG4VHK6D EMBL:BC085881 IPI:IPI00370009
RefSeq:NP_001008282.1 UniGene:Rn.101332 IntAct:Q5U2S7 STRING:Q5U2S7
Ensembl:ENSRNOT00000039836 GeneID:287670 KEGG:rno:287670
UCSC:RGD:1311470 InParanoid:Q5U2S7 NextBio:626775
Genevestigator:Q5U2S7 Uniprot:Q5U2S7
Length = 530
Score = 188 (71.2 bits), Expect = 1.2e-11, P = 1.2e-11
Identities = 55/190 (28%), Positives = 91/190 (47%)
Query: 179 YCYYGGMIFIGQKRFRKALELLHNVVT-APMSSINAIAVEAYKKYILVSLIHHGQFSSTL 237
Y YY G I Q + +A + N + AP + +K I+V L+ G+ L
Sbjct: 284 YLYYTGRIKAIQLEYSEARRTMTNALRKAPQHTAVGFKQTVHKLLIVVELLL-GEIPDRL 342
Query: 238 PKYTSSAAQRNLKNFSQPYMELVNTYNTGKIVELETYVQTNREKFESDNNLGLVKQVVSS 297
Q +LK PY L TG + + + EKF++D L+ ++ +
Sbjct: 343 -----QFRQPSLKRSLMPYFLLTQAVRTGNLAKFNQVLDQFGEKFQTDGTYTLIIRLRHN 397
Query: 298 MYKRNIQRLTQTYLTLSLQDIANTVQLNSSKEAEMHVLQMIQDGEIFATINQKDGMVRFL 357
+ K ++ ++ +Y +SL DIA +QL+S ++AE V + I+DG I A+IN + G V+
Sbjct: 398 VIKTGVRMISLSYSRISLADIAQKLQLDSPEDAEFIVAKAIRDGVIEASINHEKGYVQSK 457
Query: 358 EDPEQYKTCE 367
E + Y T E
Sbjct: 458 EMIDIYSTRE 467
>UNIPROTKB|Q2KJ46 [details] [associations]
symbol:PSMD3 "26S proteasome non-ATPase regulatory subunit
3" species:9913 "Bos taurus" [GO:0022624 "proteasome accessory
complex" evidence=ISS] [GO:0042176 "regulation of protein catabolic
process" evidence=IEA] [GO:0030234 "enzyme regulator activity"
evidence=IEA] InterPro:IPR000717 InterPro:IPR011990
InterPro:IPR013586 Pfam:PF01399 Pfam:PF08375 SMART:SM00088
GO:GO:0030234 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0050790
Gene3D:1.25.40.10 GO:GO:0042176 InterPro:IPR013143 SMART:SM00753
GO:GO:0022624 eggNOG:NOG251646 HOGENOM:HOG000193909 KO:K03033
EMBL:BC105526 IPI:IPI00707518 RefSeq:NP_001039365.1
UniGene:Bt.51586 ProteinModelPortal:Q2KJ46 STRING:Q2KJ46
PRIDE:Q2KJ46 Ensembl:ENSBTAT00000028608 GeneID:504937
KEGG:bta:504937 CTD:5709 GeneTree:ENSGT00490000043406
HOVERGEN:HBG000703 InParanoid:Q2KJ46 OMA:NQSVKAM OrthoDB:EOG4VHK6D
NextBio:20866898 Uniprot:Q2KJ46
Length = 534
Score = 188 (71.2 bits), Expect = 1.2e-11, P = 1.2e-11
Identities = 55/190 (28%), Positives = 91/190 (47%)
Query: 179 YCYYGGMIFIGQKRFRKALELLHNVVT-APMSSINAIAVEAYKKYILVSLIHHGQFSSTL 237
Y YY G I Q + +A + N + AP + +K I+V L+ G+ L
Sbjct: 288 YLYYTGRIKAIQLEYSEARRTMTNALRKAPQHTAVGFKQTVHKLLIVVELLL-GEIPDRL 346
Query: 238 PKYTSSAAQRNLKNFSQPYMELVNTYNTGKIVELETYVQTNREKFESDNNLGLVKQVVSS 297
Q +LK PY L TG + + + EKF++D L+ ++ +
Sbjct: 347 -----QFRQPSLKRSLMPYFLLTQAVRTGNLAKFNQVLDQFGEKFQADGTYTLIIRLRHN 401
Query: 298 MYKRNIQRLTQTYLTLSLQDIANTVQLNSSKEAEMHVLQMIQDGEIFATINQKDGMVRFL 357
+ K ++ ++ +Y +SL DIA +QL+S ++AE V + I+DG I A+IN + G V+
Sbjct: 402 VIKTGVRMISLSYSRISLADIAQKLQLDSPEDAEFIVAKAIRDGVIEASINHEKGYVQSK 461
Query: 358 EDPEQYKTCE 367
E + Y T E
Sbjct: 462 EMIDIYSTRE 471
>UNIPROTKB|E2QUY7 [details] [associations]
symbol:PSMD3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0022624 "proteasome accessory complex"
evidence=IEA] [GO:0042176 "regulation of protein catabolic process"
evidence=IEA] [GO:0030234 "enzyme regulator activity" evidence=IEA]
InterPro:IPR000717 InterPro:IPR011990 InterPro:IPR013586
Pfam:PF01399 Pfam:PF08375 SMART:SM00088 GO:GO:0030234
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0050790
Gene3D:1.25.40.10 GO:GO:0000502 GO:GO:0042176 InterPro:IPR013143
SMART:SM00753 KO:K03033 CTD:5709 GeneTree:ENSGT00490000043406
OMA:NQSVKAM EMBL:AAEX03006469 RefSeq:XP_548138.2
Ensembl:ENSCAFT00000025807 GeneID:491018 KEGG:cfa:491018
Uniprot:E2QUY7
Length = 534
Score = 188 (71.2 bits), Expect = 1.2e-11, P = 1.2e-11
Identities = 55/190 (28%), Positives = 91/190 (47%)
Query: 179 YCYYGGMIFIGQKRFRKALELLHNVVT-APMSSINAIAVEAYKKYILVSLIHHGQFSSTL 237
Y YY G I Q + +A + N + AP + +K I+V L+ G+ L
Sbjct: 288 YLYYTGRIKAIQLEYSEARRTMTNALRKAPQHTAVGFKQTVHKLLIVVELLL-GEIPDRL 346
Query: 238 PKYTSSAAQRNLKNFSQPYMELVNTYNTGKIVELETYVQTNREKFESDNNLGLVKQVVSS 297
Q +LK PY L TG + + + EKF++D L+ ++ +
Sbjct: 347 -----QFRQPSLKRSLMPYFLLTQAVRTGNLAKFNQVLDQFGEKFQADGTYTLIIRLRHN 401
Query: 298 MYKRNIQRLTQTYLTLSLQDIANTVQLNSSKEAEMHVLQMIQDGEIFATINQKDGMVRFL 357
+ K ++ ++ +Y +SL DIA +QL+S ++AE V + I+DG I A+IN + G V+
Sbjct: 402 VIKTGVRMISLSYSRISLADIAQKLQLDSPEDAEFIVAKAIRDGVIEASINHEKGYVQSK 461
Query: 358 EDPEQYKTCE 367
E + Y T E
Sbjct: 462 EMIDIYSTRE 471
>UNIPROTKB|O43242 [details] [associations]
symbol:PSMD3 "26S proteasome non-ATPase regulatory subunit
3" species:9606 "Homo sapiens" [GO:0030234 "enzyme regulator
activity" evidence=IEA] [GO:0042176 "regulation of protein
catabolic process" evidence=IEA] [GO:0022624 "proteasome accessory
complex" evidence=ISS] [GO:0000502 "proteasome complex"
evidence=TAS] [GO:0000075 "cell cycle checkpoint" evidence=TAS]
[GO:0000082 "G1/S transition of mitotic cell cycle" evidence=TAS]
[GO:0000084 "S phase of mitotic cell cycle" evidence=TAS]
[GO:0000209 "protein polyubiquitination" evidence=TAS] [GO:0000216
"M/G1 transition of mitotic cell cycle" evidence=TAS] [GO:0000278
"mitotic cell cycle" evidence=TAS] [GO:0002474 "antigen processing
and presentation of peptide antigen via MHC class I" evidence=TAS]
[GO:0002479 "antigen processing and presentation of exogenous
peptide antigen via MHC class I, TAP-dependent" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0005829 "cytosol"
evidence=TAS] [GO:0006521 "regulation of cellular amino acid
metabolic process" evidence=TAS] [GO:0006915 "apoptotic process"
evidence=TAS] [GO:0006977 "DNA damage response, signal transduction
by p53 class mediator resulting in cell cycle arrest" evidence=TAS]
[GO:0010467 "gene expression" evidence=TAS] [GO:0016032 "viral
reproduction" evidence=TAS] [GO:0016070 "RNA metabolic process"
evidence=TAS] [GO:0016071 "mRNA metabolic process" evidence=TAS]
[GO:0031145 "anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] Reactome:REACT_13505 Reactome:REACT_578
Reactome:REACT_71 Reactome:REACT_21257 Reactome:REACT_6850
Reactome:REACT_111217 InterPro:IPR000717 InterPro:IPR011990
InterPro:IPR013586 Pfam:PF01399 Pfam:PF08375 SMART:SM00088
GO:GO:0005829 Reactome:REACT_111102 Reactome:REACT_116125
Reactome:REACT_6900 GO:GO:0006915 GO:GO:0010467 GO:GO:0016071
Reactome:REACT_115566 GO:GO:0030234 GO:GO:0005654 GO:GO:0002479
GO:GO:0016032 Reactome:REACT_21300 GO:GO:0006977 GO:GO:0042981
GO:GO:0044281 GO:GO:0000082 EMBL:CH471152 Gene3D:1.10.10.10
InterPro:IPR011991 Gene3D:1.25.40.10 GO:GO:0051436 GO:GO:0000216
GO:GO:0042176 GO:GO:0000209 GO:GO:0000084 GO:GO:0031145
GO:GO:0051437 GO:GO:0006521 Reactome:REACT_383 InterPro:IPR013143
SMART:SM00753 GO:GO:0022624 eggNOG:NOG251646 HOGENOM:HOG000193909
KO:K03033 CTD:5709 HOVERGEN:HBG000703 OMA:NQSVKAM OrthoDB:EOG4VHK6D
EMBL:D67025 EMBL:BT007217 EMBL:AK022896 EMBL:BC000074 EMBL:BC004859
EMBL:BC012302 EMBL:BC020518 EMBL:BC025686 IPI:IPI00011603
RefSeq:NP_002800.2 UniGene:Hs.12970 ProteinModelPortal:O43242
DIP:DIP-27571N IntAct:O43242 MINT:MINT-5003834 STRING:O43242
PhosphoSite:O43242 PaxDb:O43242 PeptideAtlas:O43242 PRIDE:O43242
DNASU:5709 Ensembl:ENST00000264639 GeneID:5709 KEGG:hsa:5709
UCSC:uc002htn.1 GeneCards:GC17P038137 HGNC:HGNC:9560 HPA:CAB017038
neXtProt:NX_O43242 PharmGKB:PA38123 InParanoid:O43242
PhylomeDB:O43242 ChiTaRS:PSMD3 GenomeRNAi:5709 NextBio:22182
ArrayExpress:O43242 Bgee:O43242 CleanEx:HS_PSMD3
Genevestigator:O43242 GermOnline:ENSG00000108344 Uniprot:O43242
Length = 534
Score = 188 (71.2 bits), Expect = 1.2e-11, P = 1.2e-11
Identities = 55/190 (28%), Positives = 91/190 (47%)
Query: 179 YCYYGGMIFIGQKRFRKALELLHNVVT-APMSSINAIAVEAYKKYILVSLIHHGQFSSTL 237
Y YY G I Q + +A + N + AP + +K I+V L+ G+ L
Sbjct: 288 YLYYTGRIKAIQLEYSEARRTMTNALRKAPQHTAVGFKQTVHKLLIVVELLL-GEIPDRL 346
Query: 238 PKYTSSAAQRNLKNFSQPYMELVNTYNTGKIVELETYVQTNREKFESDNNLGLVKQVVSS 297
Q +LK PY L TG + + + EKF++D L+ ++ +
Sbjct: 347 -----QFRQPSLKRSLMPYFLLTQAVRTGNLAKFNQVLDQFGEKFQADGTYTLIIRLRHN 401
Query: 298 MYKRNIQRLTQTYLTLSLQDIANTVQLNSSKEAEMHVLQMIQDGEIFATINQKDGMVRFL 357
+ K ++ ++ +Y +SL DIA +QL+S ++AE V + I+DG I A+IN + G V+
Sbjct: 402 VIKTGVRMISLSYSRISLADIAQKLQLDSPEDAEFIVAKAIRDGVIEASINHEKGYVQSK 461
Query: 358 EDPEQYKTCE 367
E + Y T E
Sbjct: 462 EMIDIYSTRE 471
>DICTYBASE|DDB_G0288621 [details] [associations]
symbol:psmD3 "26S proteasome non-ATPase regulatory
subunit 3" species:44689 "Dictyostelium discoideum" [GO:0050790
"regulation of catalytic activity" evidence=IEA] [GO:0042176
"regulation of protein catabolic process" evidence=IEA] [GO:0030234
"enzyme regulator activity" evidence=IEA] [GO:0000502 "proteasome
complex" evidence=IEA;ISS] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=ISS] [GO:0004175 "endopeptidase
activity" evidence=ISS] [GO:0044351 "macropinocytosis"
evidence=RCA] InterPro:IPR000717 InterPro:IPR013586 Pfam:PF01399
Pfam:PF08375 SMART:SM00088 dictyBase:DDB_G0288621 GO:GO:0030234
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0050790
GenomeReviews:CM000154_GR EMBL:AAFI02000119 GO:GO:0004175
GO:GO:0000502 GO:GO:0006511 InterPro:IPR000082 GO:GO:0042176
InterPro:IPR013143 SMART:SM00753 eggNOG:NOG251646 KO:K03033
OMA:NQSVKAM RefSeq:XP_001134521.1 STRING:Q1ZXD3 PRIDE:Q1ZXD3
EnsemblProtists:DDB0232980 GeneID:8626718 KEGG:ddi:DDB_G0288621
Uniprot:Q1ZXD3
Length = 504
Score = 185 (70.2 bits), Expect = 2.3e-11, P = 2.3e-11
Identities = 54/217 (24%), Positives = 104/217 (47%)
Query: 176 FFLYCYYGGMIFIGQKRFRKALELLHNVVT-APMSSINAIAVEAYKKYILVSLIHHGQFS 234
F Y YY G I Q + ++ + L + AP ++ YK +V L+ G+
Sbjct: 253 FARYFYYQGRIRAIQLEYAESFKFLTQAIRKAPQNTAGGFRRTVYKLLSIVQLLM-GE-- 309
Query: 235 STLPKYTSSAAQRNLKNFSQPYMELVNTYNTGKIVELETYVQTNREKFESDNNLGLVKQV 294
+P+ ++ +Q+ LK +PY L G + ++ N + F+SD LV+++
Sbjct: 310 --IPE-RNTFSQKQLKIALKPYFHLTEAVRVGDLGSFNQALEQNSDIFKSDQTFTLVQRL 366
Query: 295 VSSMYKRNIQRLTQTYLTLSLQDIANTVQLNSSKEAEMHVL-QMIQDGEIFATINQKDGM 353
S++ K +++L Y +S DI ++ + + + M ++ + I+DG I ATIN + G
Sbjct: 367 RSNVIKAGLKKLNTAYSRISFNDICTKLKFDGTTQDIMFIIAKTIKDGVIDATINYEGGY 426
Query: 354 VRFLEDPEQYKTCEMIEHIDSSIQRIMSL-SKKLTAM 389
++ E+ + Y T E + + I + + + L AM
Sbjct: 427 LQSRENIDAYSTQEPLHAFSNRIDICLKIHNDSLKAM 463
>TAIR|locus:2204385 [details] [associations]
symbol:AT1G75990 species:3702 "Arabidopsis thaliana"
[GO:0000502 "proteasome complex" evidence=IEA;IDA] [GO:0005634
"nucleus" evidence=ISM] [GO:0008541 "proteasome regulatory
particle, lid subcomplex" evidence=ISS] [GO:0030234 "enzyme
regulator activity" evidence=IEA] [GO:0042176 "regulation of
protein catabolic process" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0030163 "protein catabolic process" evidence=TAS] [GO:0005886
"plasma membrane" evidence=IDA] [GO:0016020 "membrane"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0042023 "DNA
endoreduplication" evidence=RCA] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=RCA]
[GO:0043248 "proteasome assembly" evidence=RCA] [GO:0051510
"regulation of unidimensional cell growth" evidence=RCA]
[GO:0051788 "response to misfolded protein" evidence=RCA]
InterPro:IPR000717 InterPro:IPR013586 Pfam:PF01399 Pfam:PF08375
SMART:SM00088 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005829
GO:GO:0005886 GO:GO:0030234 EMBL:AC007396 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0050790 GO:GO:0030163 GO:GO:0000502
GO:GO:0042176 InterPro:IPR013143 SMART:SM00753 eggNOG:NOG251646
HOGENOM:HOG000193909 KO:K03033 ProtClustDB:CLSN2682716
EMBL:AY057508 IPI:IPI00526971 PIR:E96788 RefSeq:NP_177726.1
UniGene:At.15402 ProteinModelPortal:Q9LQR8 SMR:Q9LQR8 IntAct:Q9LQR8
STRING:Q9LQR8 PaxDb:Q9LQR8 PRIDE:Q9LQR8 EnsemblPlants:AT1G75990.1
GeneID:843931 KEGG:ath:AT1G75990 TAIR:At1g75990 InParanoid:Q9LQR8
OMA:LKHDNET PhylomeDB:Q9LQR8 Genevestigator:Q9LQR8
GermOnline:AT1G75990 Uniprot:Q9LQR8
Length = 487
Score = 178 (67.7 bits), Expect = 1.3e-10, P = 1.3e-10
Identities = 60/205 (29%), Positives = 104/205 (50%)
Query: 168 YEINLPRDFFLYCYYGGMIFIGQKRFRKALE-LLHNVVTAPMSSINAIAVEAYKKYILVS 226
+E + + F Y +Y G I Q + A E LL AP++S+ ++ K I+V
Sbjct: 230 FEAHSNQQFCRYLFYLGKIRTIQLEYTDAKESLLQAARKAPVASLG-FRIQCNKWAIIVR 288
Query: 227 LIHHGQFSSTLPKYTSSAAQRNLKNFSQPYMELVNTYNTGKIVELETYVQTNREK-FESD 285
L+ G+ +P+ S Q+ ++ +PY EL N G + EL +Q K F D
Sbjct: 289 LLL-GE----IPE-RSIFTQKGMEKTLRPYFELTNAVRIGDL-ELFGKIQEKFAKTFAED 341
Query: 286 NNLGLVKQVVSSMYKRNIQRLTQTYLTLSLQDIANTVQLNSSK---EAEMHVLQMIQDGE 342
L+ ++ ++ + ++ ++ +Y +SLQD+A ++LNS+ +AE V + I+DG
Sbjct: 342 RTHNLIVRLRHNVIRTGLRNISISYSRISLQDVAQKLRLNSANPVADAESIVAKAIRDGA 401
Query: 343 IFATINQKDGMVRFLEDPEQYKTCE 367
I ATI+ K+G + E + Y T E
Sbjct: 402 IDATIDHKNGCMVSKETGDIYSTNE 426
>UNIPROTKB|F1RXA7 [details] [associations]
symbol:LOC100512253 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0042176 "regulation of protein catabolic process"
evidence=IEA] [GO:0030234 "enzyme regulator activity" evidence=IEA]
[GO:0000502 "proteasome complex" evidence=IEA] InterPro:IPR000717
InterPro:IPR013586 Pfam:PF01399 Pfam:PF08375 SMART:SM00088
GO:GO:0030234 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0050790
GO:GO:0000502 GO:GO:0042176 InterPro:IPR013143 SMART:SM00753
GeneTree:ENSGT00490000043406 OMA:NQSVKAM EMBL:CU928026
Ensembl:ENSSSCT00000019042 Uniprot:F1RXA7
Length = 536
Score = 177 (67.4 bits), Expect = 2.0e-10, P = 2.0e-10
Identities = 55/192 (28%), Positives = 91/192 (47%)
Query: 179 YCYYG--GMIFIGQKRFRKALELLHNVVT-APMSSINAIAVEAYKKYILVSLIHHGQFSS 235
Y YY G I Q + +A + N + AP + +K I+V L+ G+
Sbjct: 288 YLYYTDPGRIKAIQLEYSEARRTMTNALRKAPQHTAVGFKQTVHKLLIVVELLL-GEIPD 346
Query: 236 TLPKYTSSAAQRNLKNFSQPYMELVNTYNTGKIVELETYVQTNREKFESDNNLGLVKQVV 295
L Q +LK PY L TG + + + EKF++D L+ ++
Sbjct: 347 RL-----QFRQPSLKRSLMPYFLLTQAVRTGNLAKFNQVLDQFGEKFQADGTYTLIIRLR 401
Query: 296 SSMYKRNIQRLTQTYLTLSLQDIANTVQLNSSKEAEMHVLQMIQDGEIFATINQKDGMVR 355
++ K ++ ++ +Y +SL DIA +QL+S ++AE V + I+DG I A+IN + G V+
Sbjct: 402 HNVIKTGVRMISLSYSRISLADIAQKLQLDSPEDAEFIVAKAIRDGVIEASINHEKGYVQ 461
Query: 356 FLEDPEQYKTCE 367
E + Y T E
Sbjct: 462 SKEMIDIYSTRE 473
>UNIPROTKB|G4NDR0 [details] [associations]
symbol:MGG_00884 "26S proteasome non-ATPase regulatory
subunit 3" species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR000717 InterPro:IPR013586 Pfam:PF01399
Pfam:PF08375 SMART:SM00088 GO:GO:0030234 EMBL:CM001235
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0050790 GO:GO:0000502
GO:GO:0042176 InterPro:IPR013143 SMART:SM00753 KO:K03033
RefSeq:XP_003718082.1 EnsemblFungi:MGG_00884T0 GeneID:2674538
KEGG:mgr:MGG_00884 Uniprot:G4NDR0
Length = 557
Score = 177 (67.4 bits), Expect = 2.2e-10, P = 2.2e-10
Identities = 65/236 (27%), Positives = 109/236 (46%)
Query: 179 YCYYGGMIFIGQKRFRKALELLHNVVTAPMSSINAIAVE--AYKKYILVSLIHHGQFSST 236
Y YY G I Q R+ +A E L SS A+ A K ++V L+
Sbjct: 305 YLYYLGRIRAIQLRYTEAHEHLTAATRKAPSSNCAVGFSQTATKLLLVVELL-----MGD 359
Query: 237 LPKYTSSAAQRNLKNFSQPYMELVNTYNTGKIVELETYVQTNREKFESDNNLGLVKQVVS 296
+P ++ Q L+ PY LV G + ET + + + F D L+ ++
Sbjct: 360 IPD-RATFRQPTLEEALHPYFLLVQAVRVGNLDNFETTIADHADTFRKDGTYTLILRLRQ 418
Query: 297 SMYKRNIQRLTQTYLTLSLQDIANTVQLNSSKEAEMHVLQMIQDGEIFATINQKDGMVRF 356
++ + I+ ++ +Y +SL+DI + L S + AE V + I+DG I AT++++ G +R
Sbjct: 419 NVIRTGIRMMSLSYSRISLRDICIRLHLGSEESAEYIVAKAIRDGVIEATLDREHGYMRS 478
Query: 357 LEDPEQYKTCEMIEHIDSSIQRIMSL-SKKLTAMDELISCDPLYLGKA--GRERQR 409
E + Y T E E I+ ++L + + AM ++ L L A RER+R
Sbjct: 479 KEVGDVYATREPGEAFHDRIRACLALHDESVKAMRFPMNQHRLELKNAQEARERER 534
>TAIR|locus:2198561 [details] [associations]
symbol:EMB2719 "EMBRYO DEFECTIVE 2719" species:3702
"Arabidopsis thaliana" [GO:0000502 "proteasome complex"
evidence=IEA;IDA] [GO:0005634 "nucleus" evidence=ISM] [GO:0008541
"proteasome regulatory particle, lid subcomplex" evidence=ISS]
[GO:0009793 "embryo development ending in seed dormancy"
evidence=NAS] [GO:0030234 "enzyme regulator activity" evidence=IEA]
[GO:0042176 "regulation of protein catabolic process" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=TAS] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0009506 "plasmodesma"
evidence=IDA] [GO:0006635 "fatty acid beta-oxidation" evidence=RCA]
[GO:0009407 "toxin catabolic process" evidence=RCA] [GO:0042023
"DNA endoreduplication" evidence=RCA] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=RCA]
[GO:0043248 "proteasome assembly" evidence=RCA] [GO:0051510
"regulation of unidimensional cell growth" evidence=RCA]
[GO:0051788 "response to misfolded protein" evidence=RCA]
[GO:0080129 "proteasome core complex assembly" evidence=RCA]
InterPro:IPR000717 InterPro:IPR013586 Pfam:PF01399 Pfam:PF08375
SMART:SM00088 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005829
GO:GO:0005886 GO:GO:0009506 GO:GO:0030234 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0050790 GO:GO:0000502 GO:GO:0042176
EMBL:AC022472 InterPro:IPR013143 SMART:SM00753 EMBL:AY120740
IPI:IPI00528285 PIR:G86335 RefSeq:NP_173447.1 UniGene:At.15440
ProteinModelPortal:Q9LNU4 SMR:Q9LNU4 IntAct:Q9LNU4 STRING:Q9LNU4
PaxDb:Q9LNU4 PRIDE:Q9LNU4 ProMEX:Q9LNU4 EnsemblPlants:AT1G20200.1
GeneID:838609 KEGG:ath:AT1G20200 TAIR:At1g20200 eggNOG:NOG251646
HOGENOM:HOG000193909 InParanoid:Q9LNU4 KO:K03033 OMA:NYLSTSH
PhylomeDB:Q9LNU4 ProtClustDB:CLSN2682716 Genevestigator:Q9LNU4
GermOnline:AT1G20200 Uniprot:Q9LNU4
Length = 488
Score = 172 (65.6 bits), Expect = 6.1e-10, P = 6.1e-10
Identities = 56/204 (27%), Positives = 100/204 (49%)
Query: 168 YEINLPRDFFLYCYYGGMIFIGQKRFRKALE-LLHNVVTAPMSSINAIAVEAYKKYILVS 226
+E + + F Y +Y G I Q + A E LL AP++++ ++ K ILV
Sbjct: 231 FEAHSNQQFCRYLFYLGKIRTIQLEYTDAKESLLQAARKAPIAALG-FRIQCNKWAILVR 289
Query: 227 LIHHGQFSSTLPKYTSSAAQRNLKNFSQPYMELVNTYNTGKIVELETYVQTNREKFESDN 286
L+ G+ +P+ S Q+ ++ +PY EL N G + T + + F D
Sbjct: 290 LLL-GE----IPE-RSIFTQKGMEKALRPYFELTNAVRIGDLELFRTVQEKFLDTFAQDR 343
Query: 287 NLGLVKQVVSSMYKRNIQRLTQTYLTLSLQDIANTVQLNSSK---EAEMHVLQMIQDGEI 343
L+ ++ ++ + ++ ++ +Y +SL D+A ++LNS +AE V + I+DG I
Sbjct: 344 THNLIVRLRHNVIRTGLRNISISYSRISLPDVAKKLRLNSENPVADAESIVAKAIRDGAI 403
Query: 344 FATINQKDGMVRFLEDPEQYKTCE 367
ATI+ K+G + E + Y T E
Sbjct: 404 DATIDHKNGCMVSKETGDIYSTNE 427
>WB|WBGene00000815 [details] [associations]
symbol:csn-3 species:6239 "Caenorhabditis elegans"
[GO:0000910 "cytokinesis" evidence=IMP] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IMP;IDA]
[GO:0040001 "establishment of mitotic spindle localization"
evidence=IMP] [GO:0008180 "signalosome" evidence=IPI] [GO:0005515
"protein binding" evidence=IPI] InterPro:IPR000717 Pfam:PF01399
GO:GO:0007275 GO:GO:0005737 GO:GO:0030154 GO:GO:0048477
GO:GO:0000910 GO:GO:0006511 GO:GO:0008180 GO:GO:0040001
eggNOG:NOG249849 KO:K12177 GeneTree:ENSGT00490000043408
EMBL:FO081257 RefSeq:NP_499878.3 ProteinModelPortal:Q9N425
IntAct:Q9N425 MINT:MINT-1115499 STRING:Q9N425 PaxDb:Q9N425
EnsemblMetazoa:Y38C1AA.2 GeneID:176834 KEGG:cel:CELE_Y38C1AA.2
UCSC:Y38C1AA.2 CTD:176834 WormBase:Y38C1AA.2 InParanoid:Q9N425
OMA:YASVEPF NextBio:894218 Uniprot:Q9N425
Length = 501
Score = 169 (64.5 bits), Expect = 1.4e-09, P = 1.4e-09
Identities = 50/181 (27%), Positives = 86/181 (47%)
Query: 173 PRDFFLYCYYGGMIFIGQKRFRKALELLHNVVTAPMSSINAIAVEAYKKYILVSLIHHGQ 232
P+ Y Y G I I KRF AL LL V P S+ ++++KKY+L+SLI G+
Sbjct: 256 PKYVLDYLYNGACILIELKRFEDALFLLEICVGMPAFSVQDQHLDSFKKYVLISLILKGK 315
Query: 233 FSSTLPKYTSSAAQRNLKNFSQPYMELVN-----TYNTGKIVELETYVQTNREKFESDNN 287
T + +A R+ K S Y + + NT VE + V++ +++ D N
Sbjct: 316 VDVT--ENGDKSAIRHFKTKSPEYKQFSEIRFSRSSNTHSAVE--SLVKSAKDRLRKDGN 371
Query: 288 LGLVKQVVSSMYKRNIQRLTQTYLTLSLQDIANTVQLNSSKEAEMHVLQMIQDGEIFATI 347
+ K +V M K+ I LT+ + ++ + +I L S + + Q++++ I I
Sbjct: 372 TEIAKYLVVEMKKKTIMSLTRMFTSIRISEIEELAFLKSRDQVTELIGQLVEEQRITVRI 431
Query: 348 N 348
+
Sbjct: 432 D 432
>ASPGD|ASPL0000036390 [details] [associations]
symbol:AN10337 species:162425 "Emericella nidulans"
[GO:0000502 "proteasome complex" evidence=IEA] [GO:0042176
"regulation of protein catabolic process" evidence=IEA] [GO:0030234
"enzyme regulator activity" evidence=IEA] InterPro:IPR000717
InterPro:IPR013586 Pfam:PF01399 Pfam:PF08375 SMART:SM00088
GO:GO:0030234 EMBL:BN001306 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0050790 GO:GO:0000502 GO:GO:0042176 InterPro:IPR013143
SMART:SM00753 OMA:NYLSTSH EnsemblFungi:CADANIAT00010340
Uniprot:C8VJN4
Length = 641
Score = 149 (57.5 bits), Expect = 3.4e-07, P = 3.4e-07
Identities = 61/236 (25%), Positives = 108/236 (45%)
Query: 179 YCYYGGMIFIGQKRFRKAL-ELLHNVVTAPMS-SINAIAVEAYKKYILVSLIHHGQFSST 236
Y YY G I Q ++ +A L+ +P S S ++K ++V L+ G
Sbjct: 389 YLYYLGRIRAIQLQYTEAHGHLIGATRKSPASHSARGFYQASHKLLVVVELLM-GDIPDR 447
Query: 237 LPKYTSSAAQRNLKNFSQPYMELVNTYNTGKIVELETYVQTNREKFESDNNLGLVKQVVS 296
+ +A +R L PY LV + G + V T+ F D L+ ++
Sbjct: 448 AI-FRQAALERAL----HPYFLLVQAVSVGDLDGFLNIVNTHSSTFRKDGTYTLILRLRQ 502
Query: 297 SMYKRNIQRLTQTYLTLSLQDIANTVQLNSSKEAEMHVLQMIQDGEIFATINQKDGMVRF 356
++ K I+ ++ +Y +SL+DI + L+S + AE V + I+DG I A+++ + G ++
Sbjct: 503 NVIKTGIRMMSLSYSRISLRDICLRLGLDSEESAEYIVAKAIRDGVIEASLDHERGFMKS 562
Query: 357 LEDPEQYKTCEMIEHIDSSIQRIMSL-SKKLTAMDELISCDPLYLGKA--GRERQR 409
+ + Y T E E I+ + L + + AM ++ L L A RER+R
Sbjct: 563 KDVGDVYATREPGEVFHERIRACLGLHDESVKAMRFPMNQHRLELKSAQEARERER 618
>POMBASE|SPAC222.16c [details] [associations]
symbol:csn3 "COP9/signalosome complex subunit Csn3
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0003674
"molecular_function" evidence=ND] [GO:0005628 "prospore membrane"
evidence=IDA] [GO:0005634 "nucleus" evidence=ISS;IDA] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0005829 "cytosol" evidence=IDA]
[GO:0008180 "signalosome" evidence=ISS] [GO:0010388 "cullin
deneddylation" evidence=NAS] PomBase:SPAC222.16c GO:GO:0005829
EMBL:CU329670 GenomeReviews:CU329670_GR GO:GO:0005628 GO:GO:0008180
GO:GO:0010388 eggNOG:NOG249849 OrthoDB:EOG42859W PIR:T41713
PIR:T50156 RefSeq:NP_593155.3 EnsemblFungi:SPAC222.16c.1
GeneID:2541912 NextBio:20802999 Uniprot:Q9UT51
Length = 338
Score = 142 (55.0 bits), Expect = 6.4e-07, P = 6.4e-07
Identities = 56/259 (21%), Positives = 109/259 (42%)
Query: 139 LTTLHPEFLQLCLLAKCYKAGLSVLEDDIYEINLPRDFFL-YCYYGGMIFIGQKRFRKAL 197
++ +H +L+ L Y L D ++P L YC Y +G A
Sbjct: 80 ISVMHVCYLKELLRQGQYATSLKSFNDLEVSKHIPGSILLQYCMYAAYHCLGNNDLDSAK 139
Query: 198 ELLHNVVTAPMSSINAIAVEAYKKYILVSLIHHGQFSSTLPKYTSSAAQRNLKNFSQPYM 257
+++ P +++ + EAY ++L+ +I G+ L TSS LK PY
Sbjct: 140 VWYFSILYIPTTTLTSFHEEAYYSFLLLYIITTGK-KFQLDSATSSNVLP-LKRHMVPYE 197
Query: 258 ELVNTYNTGKIVELETYVQTNREKFESDNNLGLVKQVVSSMYKRNIQRLTQTYLTLSLQD 317
E ++ Y + L T ++ + +F DN+ + + +++ +T+ +L L+
Sbjct: 198 EFLDAY-LKDVNTLRTVIKEHWSRFLKDNSTAFILFALEVYPMHRLKKWRKTFSSLKLEY 256
Query: 318 IANTVQLNSSKEAEMHVLQM--------IQDGEIFATINQKDGMVRFLEDPEQYKTCEMI 369
IA QL S++ ++Q + +GEIF T N D + + + E
Sbjct: 257 IAK--QLAISQDVAKEIIQKFDNKTNFTVANGEIFLTFNALDDVSPEMHSDLCQQLIEAS 314
Query: 370 EHIDSSIQRIMSLSKKLTA 388
++ ++SI+ + K+ A
Sbjct: 315 KNFEASIRLKSVIYSKIMA 333
>WB|WBGene00004460 [details] [associations]
symbol:rpn-3 species:6239 "Caenorhabditis elegans"
[GO:0000502 "proteasome complex" evidence=IEA] [GO:0030234 "enzyme
regulator activity" evidence=IEA] [GO:0042176 "regulation of
protein catabolic process" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0002119 "nematode
larval development" evidence=IMP] [GO:0040007 "growth"
evidence=IMP] [GO:0008340 "determination of adult lifespan"
evidence=IMP] [GO:0006915 "apoptotic process" evidence=IMP]
InterPro:IPR000717 InterPro:IPR013586 Pfam:PF01399 Pfam:PF08375
SMART:SM00088 GO:GO:0008340 GO:GO:0009792 GO:GO:0040007
GO:GO:0006915 GO:GO:0030234 GO:GO:0002119 GO:GO:0000003
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0050790 GO:GO:0000502
GO:GO:0042176 InterPro:IPR013143 SMART:SM00753 eggNOG:NOG251646
HOGENOM:HOG000193909 KO:K03033 GeneTree:ENSGT00490000043406
OMA:NQSVKAM EMBL:FO080722 PIR:S44783 RefSeq:NP_498869.1
ProteinModelPortal:Q04908 DIP:DIP-25350N IntAct:Q04908
MINT:MINT-211615 STRING:Q04908 PaxDb:Q04908
EnsemblMetazoa:C30C11.2.1 EnsemblMetazoa:C30C11.2.2 GeneID:176196
KEGG:cel:CELE_C30C11.2 UCSC:C30C11.2 CTD:176196 WormBase:C30C11.2
InParanoid:Q04908 NextBio:891536 Uniprot:Q04908
Length = 504
Score = 143 (55.4 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 58/244 (23%), Positives = 109/244 (44%)
Query: 147 LQLCLLAKCYKAGLSVLEDDIYEINLPR-DFFLYCYYGGMIFIGQKRFRKALE-LLHNVV 204
L+ L+ + Y++ ++ + N D Y YY G I Q + A L
Sbjct: 223 LRCYLINRQYQSAAHLVSKVAFPDNASNNDLARYMYYQGRIKALQLDYNSAAGYFLQAQR 282
Query: 205 TAPMSSINAIAV-EAYKKYILVSLIHHGQFSSTLPKYTSSAAQRNLKNFSQPYMELVNTY 263
AP AI +A +K+++V + G+ +P S Q + Y++L
Sbjct: 283 KAPQEG--AIGFKQAVQKWVVVIGLLQGE----IPD-RSVFRQPIYRKCLAHYLDLSRGV 335
Query: 264 NTGKIVELETYVQTNREKFESDNNLGLVKQVVSSMYKRNIQRLTQTYLTLSLQDIANTVQ 323
G + ++ + +FE+D+ L L+ ++ ++ K I++++ Y + ++DIA +
Sbjct: 336 RDGDVARFNHNLEQFKTQFEADDTLTLIVRLRQNVIKTAIKQISLAYSRIYIKDIAKKLY 395
Query: 324 LNSSKEAEMHVLQMIQDGEIFATINQ--KDGMVRFLEDPEQ---YKTCEMIEHIDSSIQR 378
+ + E E V + I DG I A I +DG R+++ E Y+T E H D+ I+
Sbjct: 396 ITNETETEYIVAKAIADGAIDAVITSDVRDGP-RYMQSSETADIYRTSEPQAHFDTRIRY 454
Query: 379 IMSL 382
+ L
Sbjct: 455 CLEL 458
>UNIPROTKB|Q04908 [details] [associations]
symbol:rpn-3 "26S proteasome non-ATPase regulatory subunit
3" species:6239 "Caenorhabditis elegans" [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR000717 InterPro:IPR013586
Pfam:PF01399 Pfam:PF08375 SMART:SM00088 GO:GO:0008340 GO:GO:0009792
GO:GO:0040007 GO:GO:0006915 GO:GO:0030234 GO:GO:0002119
GO:GO:0000003 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0050790
GO:GO:0000502 GO:GO:0042176 InterPro:IPR013143 SMART:SM00753
eggNOG:NOG251646 HOGENOM:HOG000193909 KO:K03033
GeneTree:ENSGT00490000043406 OMA:NQSVKAM EMBL:FO080722 PIR:S44783
RefSeq:NP_498869.1 ProteinModelPortal:Q04908 DIP:DIP-25350N
IntAct:Q04908 MINT:MINT-211615 STRING:Q04908 PaxDb:Q04908
EnsemblMetazoa:C30C11.2.1 EnsemblMetazoa:C30C11.2.2 GeneID:176196
KEGG:cel:CELE_C30C11.2 UCSC:C30C11.2 CTD:176196 WormBase:C30C11.2
InParanoid:Q04908 NextBio:891536 Uniprot:Q04908
Length = 504
Score = 143 (55.4 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 58/244 (23%), Positives = 109/244 (44%)
Query: 147 LQLCLLAKCYKAGLSVLEDDIYEINLPR-DFFLYCYYGGMIFIGQKRFRKALE-LLHNVV 204
L+ L+ + Y++ ++ + N D Y YY G I Q + A L
Sbjct: 223 LRCYLINRQYQSAAHLVSKVAFPDNASNNDLARYMYYQGRIKALQLDYNSAAGYFLQAQR 282
Query: 205 TAPMSSINAIAV-EAYKKYILVSLIHHGQFSSTLPKYTSSAAQRNLKNFSQPYMELVNTY 263
AP AI +A +K+++V + G+ +P S Q + Y++L
Sbjct: 283 KAPQEG--AIGFKQAVQKWVVVIGLLQGE----IPD-RSVFRQPIYRKCLAHYLDLSRGV 335
Query: 264 NTGKIVELETYVQTNREKFESDNNLGLVKQVVSSMYKRNIQRLTQTYLTLSLQDIANTVQ 323
G + ++ + +FE+D+ L L+ ++ ++ K I++++ Y + ++DIA +
Sbjct: 336 RDGDVARFNHNLEQFKTQFEADDTLTLIVRLRQNVIKTAIKQISLAYSRIYIKDIAKKLY 395
Query: 324 LNSSKEAEMHVLQMIQDGEIFATINQ--KDGMVRFLEDPEQ---YKTCEMIEHIDSSIQR 378
+ + E E V + I DG I A I +DG R+++ E Y+T E H D+ I+
Sbjct: 396 ITNETETEYIVAKAIADGAIDAVITSDVRDGP-RYMQSSETADIYRTSEPQAHFDTRIRY 454
Query: 379 IMSL 382
+ L
Sbjct: 455 CLEL 458
>CGD|CAL0001433 [details] [associations]
symbol:RPN3 species:5476 "Candida albicans" [GO:0008541
"proteasome regulatory particle, lid subcomplex" evidence=IEA]
InterPro:IPR000717 InterPro:IPR013586 Pfam:PF01399 Pfam:PF08375
SMART:SM00088 CGD:CAL0001433 GO:GO:0030234 EMBL:AACQ01000017
EMBL:AACQ01000015 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0050790 GO:GO:0000502 GO:GO:0042176 InterPro:IPR013143
SMART:SM00753 eggNOG:NOG251646 KO:K03033 RefSeq:XP_721281.1
RefSeq:XP_721552.1 ProteinModelPortal:Q5AHZ8 STRING:Q5AHZ8
GeneID:3636917 GeneID:3637147 KEGG:cal:CaO19.10572
KEGG:cal:CaO19.3054 Uniprot:Q5AHZ8
Length = 481
Score = 139 (54.0 bits), Expect = 2.7e-06, P = 2.7e-06
Identities = 74/334 (22%), Positives = 137/334 (41%)
Query: 58 YLYFLEPCMYCSITK-ERANTLVPIIARFITSCSAEQIRYVPEK-FINVCKRYKDQVLLL 115
Y++ L K E N+L + + + S + + ++ K + VC R K+ +
Sbjct: 117 YIHLLVQVYLLDTGKLEELNSLGEHVVQLMKSFNRRSLDFIQAKVWFYVC-RAKELI--- 172
Query: 116 EAPIRGVGPMLTAIRKIQSSTEHLTTLHPEFLQLCLLAKCYKAGLSVLEDDIYEINLPRD 175
+ + P L+ + + + T + L L +S D + ++ P +
Sbjct: 173 -GDLYSIRPELSYSLRTATLRHDIETT-ASVITLLLRNYLLTHDISQASDLVEKVEFPEN 230
Query: 176 -----FFLYCYYGGMIFIGQKRFRKALELLHNVVT-APMSSI-NAIAVEAYKKYILVSLI 228
Y YY I Q + A E + + AP +S+ N A K I++ L+
Sbjct: 231 AGNALVARYYYYLARINAIQLDYSTANECVITAIRKAPQTSLANGFVQAATKLSIVIELL 290
Query: 229 HHGQFSSTLPKYTSSAAQRNLKNFSQPYMELVNTYNTGKIVELETYVQTNREKFESDNNL 288
G L + + + NL +PY + G I + F+ D+N
Sbjct: 291 M-GDIPE-LKVFKNKSG--NL----EPYFNVTKAVRLGDIKLFGEVLHKFEADFKKDDNF 342
Query: 289 GLVKQVVSSMYKRNIQRLTQTYLTLSLQDIANTVQLNSSKEAEMHVLQMIQDGEIFATIN 348
LV ++ ++ K I+ ++ +Y +SL+DI + L+S + E V + I+DG I A+IN
Sbjct: 343 TLVSRLRQNVIKTGIRIISLSYSKISLKDICIKLHLDSEESTEYIVSKAIRDGVIEASIN 402
Query: 349 QKDGMVRFLEDPEQYKTCEMIEHIDSSIQRIMSL 382
+ G ++ E + Y T D I+ +SL
Sbjct: 403 HQKGYMQSKELLDVYSTKLPQAEFDQRIKFCLSL 436
>FB|FBgn0261396 [details] [associations]
symbol:Rpn3 "Regulatory particle non-ATPase 3" species:7227
"Drosophila melanogaster" [GO:0004175 "endopeptidase activity"
evidence=ISS;IDA] [GO:0000502 "proteasome complex" evidence=ISS]
[GO:0006508 "proteolysis" evidence=ISS;IDA] [GO:0008541 "proteasome
regulatory particle, lid subcomplex" evidence=ISS] [GO:0005838
"proteasome regulatory particle" evidence=ISS;IDA] [GO:0030234
"enzyme regulator activity" evidence=IEA] [GO:0042176 "regulation
of protein catabolic process" evidence=IEA] InterPro:IPR000717
InterPro:IPR011990 InterPro:IPR013586 Pfam:PF01399 Pfam:PF08375
SMART:SM00088 GO:GO:0030234 EMBL:AE014134 GO:GO:0006508
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0050790 GO:GO:0004175
Gene3D:1.25.40.10 GO:GO:0008541 GO:GO:0042176 InterPro:IPR013143
SMART:SM00753 BRENDA:3.4.25.1 eggNOG:NOG251646 KO:K03033
GeneTree:ENSGT00490000043406 OMA:NQSVKAM EMBL:M63010 EMBL:AY089337
EMBL:BT044249 PIR:JH0665 RefSeq:NP_477300.1 UniGene:Dm.4848
ProteinModelPortal:P25161 DIP:DIP-18295N IntAct:P25161
MINT:MINT-982894 STRING:P25161 PaxDb:P25161 PRIDE:P25161
EnsemblMetazoa:FBtr0302289 GeneID:35176 KEGG:dme:Dmel_CG42641
CTD:35176 FlyBase:FBgn0261396 InParanoid:Q8T460 OrthoDB:EOG4Z08MX
PhylomeDB:P25161 ChiTaRS:Rpn3 GenomeRNAi:35176 NextBio:792228
Bgee:P25161 GermOnline:CG10484 Uniprot:P25161
Length = 494
Score = 133 (51.9 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 60/265 (22%), Positives = 112/265 (42%)
Query: 108 YKDQVLLLEAPIRGVGPMLTA-IRK--IQSSTEHLTTLHPEFLQLCLLAKCYKAGLSVLE 164
Y +V L+ + G+ L A +R +++ E L L+ L Y +++
Sbjct: 174 YFSRVAELKNSLEGIRSFLHARLRTATLRNDFEGQAVLINCLLRNYLHYALYDQADKLVK 233
Query: 165 DDIY-EINLPRDFFLYCYYGGMIFIGQKRFRKALE-LLHNVVTAPMSSINAIAVEAYKKY 222
+Y E ++ + YY G I + + A + L+ + +P + K
Sbjct: 234 KSVYPESASNNEWARFLYYLGRIKAAKLEYSDAHKHLVQALRKSPQHAAIGFRQTVQKLI 293
Query: 223 ILVSLIHHGQFSSTLPKYTSSAAQRNLKNFSQPYMELVNTYNTGKIVELETYVQTNREKF 282
I+V L+ +P+ Q L+ Y +L G + V KF
Sbjct: 294 IVVELL-----LGNIPERVVFR-QAGLRQSLGAYFQLTQAVRLGNLKRFGDVVSQYGPKF 347
Query: 283 ESDNNLGLVKQVVSSMYKRNIQRLTQTYLTLSLQDIANTVQLNSSKEAEMHVLQMIQDGE 342
+ D+ L+ ++ ++ K I+ + +Y +S QDIA + L+S+++AE V + I+DG
Sbjct: 348 QLDHTFTLIIRLRHNVIKTAIRSIGLSYSRISPQDIAKRLMLDSAEDAEFIVSKAIRDGV 407
Query: 343 IFATINQKDGMVRFLEDPEQYKTCE 367
I AT++ +R E + Y T E
Sbjct: 408 IEATLDPAQNFMRSKESTDIYSTRE 432
>POMBASE|SPBC119.01 [details] [associations]
symbol:rpn3 "19S proteasome regulatory subunit Rpn3"
species:4896 "Schizosaccharomyces pombe" [GO:0005634 "nucleus"
evidence=TAS] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=ISO] [GO:0007346 "regulation of mitotic cell
cycle" evidence=IC] [GO:0008541 "proteasome regulatory particle,
lid subcomplex" evidence=ISO] [GO:0030234 "enzyme regulator
activity" evidence=IEA] [GO:0042176 "regulation of protein
catabolic process" evidence=IEA] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=NAS]
InterPro:IPR000717 InterPro:IPR013586 Pfam:PF01399 Pfam:PF08375
SMART:SM00088 PomBase:SPBC119.01 GO:GO:0005634 GO:GO:0007346
GO:GO:0030234 GO:GO:0043161 EMBL:CU329671 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0050790 GenomeReviews:CU329671_GR
GO:GO:0008541 GO:GO:0042176 InterPro:IPR013143 SMART:SM00753
eggNOG:NOG251646 HOGENOM:HOG000193909 KO:K03033 OMA:NQSVKAM
PIR:T39299 RefSeq:NP_595282.2 ProteinModelPortal:O42897
IntAct:O42897 STRING:O42897 EnsemblFungi:SPBC119.01.1
GeneID:2540109 KEGG:spo:SPBC119.01 OrthoDB:EOG4350FR
NextBio:20801245 Uniprot:O42897
Length = 497
Score = 131 (51.2 bits), Expect = 2.2e-05, P = 2.2e-05
Identities = 49/206 (23%), Positives = 98/206 (47%)
Query: 179 YCYYGGMIFIGQKRFRKALELLHNVVTAPMSSINAIA-VEA-YKKYILVSLIHHGQFSST 236
Y YY G I Q + A E L + + +++ A+ +EA YK +I+V L+ G+
Sbjct: 250 YQYYLGRIRAIQLDYTTAHEHLVSAIRKAPNTVYAVQFLEAVYKLHIVVQLLM-GE---- 304
Query: 237 LPKYTSSAAQRNLKNFSQPYMELVNTYNTGKIVELETYVQTNREKFESDNNLGLVKQVVS 296
+P+ Q++L+ PY+ + G + + +F D L+ ++
Sbjct: 305 IPE-RRIFRQKSLEKTLVPYLRISQAVRIGDLCAFTDALSKYEAEFRFDGLYTLICRLRH 363
Query: 297 SMYKRNIQRLTQTYLTLSLQDIANTVQLNSSKEAEMHVLQMIQDGEIFATINQKDGMVRF 356
++ K ++ ++ +Y +SL+D+ + L+S + AE V + I+DG I A+I+ + +
Sbjct: 364 TVIKTGLRMISLSYSRISLRDVCIKLGLDSEESAEYIVAKGIRDGVIDASIDHSNAFMAS 423
Query: 357 LEDPEQYKTCEMIEHIDSSIQRIMSL 382
E + Y T + + IQ ++L
Sbjct: 424 NEAMDIYSTEQPQQAFHERIQFCLAL 449
>UNIPROTKB|J3QKR0 [details] [associations]
symbol:COPS3 "COP9 signalosome complex subunit 3"
species:9606 "Homo sapiens" [GO:0001701 "in utero embryonic
development" evidence=IEA] [GO:0008180 "signalosome" evidence=IEA]
EMBL:AC055811 HGNC:HGNC:2239 ChiTaRS:COPS3 Ensembl:ENST00000477299
Uniprot:J3QKR0
Length = 116
Score = 106 (42.4 bits), Expect = 3.5e-05, P = 3.5e-05
Identities = 29/103 (28%), Positives = 50/103 (48%)
Query: 3 SIENLVTQIQGLSSNASDITALKDYLKAAEDLLRSESTRLLSFLDQLDPSKHSLGYLYFL 62
++E V ++ LS+ +T L + + + +LL + L + L LD +HSLG L L
Sbjct: 4 ALEQFVNSVRQLSAQGQ-MTQLCELINKSGELLAKNLSHLDTVLGALDVQEHSLGVLAVL 62
Query: 63 EPCMYCSITKERANTLVPIIARFITSCSAEQIRYVPEKFINVC 105
+ + TL + FI++C+ E IRY + F +C
Sbjct: 63 F-VKFSMPSVPDFETLFSQVQLFISTCNGEHIRYATDTFAGLC 104
>SGD|S000000823 [details] [associations]
symbol:RPN3 "non-ATPase regulatory subunit of the 26S
proteasome" species:4932 "Saccharomyces cerevisiae" [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0003674 "molecular_function" evidence=ND] [GO:0050790
"regulation of catalytic activity" evidence=IEA] [GO:0000502
"proteasome complex" evidence=IEA] [GO:0030234 "enzyme regulator
activity" evidence=IEA] [GO:0042176 "regulation of protein
catabolic process" evidence=IEA] [GO:0008541 "proteasome regulatory
particle, lid subcomplex" evidence=IDA] InterPro:IPR000717
InterPro:IPR013586 Pfam:PF01399 Pfam:PF08375 SMART:SM00088
SGD:S000000823 GO:GO:0030234 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0050790 EMBL:BK006939 GO:GO:0008541 GO:GO:0006511 EMBL:U18778
GO:GO:0042176 InterPro:IPR013143 SMART:SM00753 PDB:4B4T PDBsum:4B4T
eggNOG:NOG251646 HOGENOM:HOG000193909 KO:K03033 OMA:LKHDNET
GeneTree:ENSGT00490000043406 OrthoDB:EOG4350FR EMBL:D78023
PIR:S50479 RefSeq:NP_010938.1 ProteinModelPortal:P40016
DIP:DIP-1322N IntAct:P40016 MINT:MINT-401279 STRING:P40016
PaxDb:P40016 PeptideAtlas:P40016 EnsemblFungi:YER021W GeneID:856742
KEGG:sce:YER021W NextBio:982876 Genevestigator:P40016
GermOnline:YER021W Uniprot:P40016
Length = 523
Score = 127 (49.8 bits), Expect = 6.6e-05, P = 6.6e-05
Identities = 31/113 (27%), Positives = 56/113 (49%)
Query: 246 QRNLKNFSQPYMELVNTYNTGKIVELETYVQTNREKFESDNNLGLVKQVVSSMYKRNIQR 305
Q N++ PY L G + + + + ++ D+ L ++ S++ K I+
Sbjct: 335 QSNMQKSLLPYYHLTKAVKLGDLKKFTSTITKYKQLLLKDDTYQLCVRLRSNVIKTGIRI 394
Query: 306 LTQTYLTLSLQDIANTVQLNSSKEAEMHVLQMIQDGEIFATINQKDGMVRFLE 358
++ TY +SL+DI + L+S + E V + I+DG I A IN +DG + E
Sbjct: 395 ISLTYKKISLRDICLKLNLDSEQTVEYMVSRAIRDGVIEAKINHEDGFIETTE 447
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.320 0.134 0.377 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 424 417 0.00082 118 3 11 22 0.37 34
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 35
No. of states in DFA: 593 (63 KB)
Total size of DFA: 229 KB (2126 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 35.14u 0.10s 35.24t Elapsed: 00:00:01
Total cpu time: 35.15u 0.10s 35.25t Elapsed: 00:00:01
Start: Mon May 20 15:04:19 2013 End: Mon May 20 15:04:20 2013