Query 014454
Match_columns 424
No_of_seqs 677 out of 4021
Neff 10.8
Searched_HMMs 29240
Date Mon Mar 25 11:51:47 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/014454.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/014454hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2xyi_A Probable histone-bindin 100.0 8.8E-67 3E-71 495.4 38.2 409 5-414 9-418 (430)
2 4gqb_B Methylosome protein 50; 100.0 1E-43 3.6E-48 325.9 35.8 256 121-412 78-337 (344)
3 3ow8_A WD repeat-containing pr 100.0 9.3E-41 3.2E-45 303.9 40.6 286 43-405 34-320 (321)
4 2ynn_A Coatomer subunit beta'; 100.0 3.4E-41 1.2E-45 304.6 36.9 251 122-409 10-262 (304)
5 4g56_B MGC81050 protein; prote 100.0 1.2E-41 4E-46 314.5 34.3 255 120-407 89-344 (357)
6 1vyh_C Platelet-activating fac 100.0 6.1E-41 2.1E-45 315.7 35.7 246 121-405 146-410 (410)
7 3fm0_A Protein CIAO1; WDR39,SG 100.0 4.2E-40 1.4E-44 302.9 36.7 307 43-410 18-339 (345)
8 1vyh_C Platelet-activating fac 100.0 3.4E-40 1.2E-44 310.6 36.6 249 121-408 104-371 (410)
9 3ow8_A WD repeat-containing pr 100.0 3.9E-40 1.3E-44 299.8 33.1 253 119-408 26-281 (321)
10 1got_B GT-beta; complex (GTP-b 100.0 7.6E-39 2.6E-43 293.9 39.7 246 121-403 93-340 (340)
11 2pm7_B Protein transport prote 100.0 3E-39 1E-43 290.8 35.3 259 121-406 5-285 (297)
12 2ynn_A Coatomer subunit beta'; 100.0 1.5E-38 5.1E-43 287.3 39.3 285 43-406 15-302 (304)
13 3iz6_a 40S ribosomal protein R 100.0 4.4E-39 1.5E-43 300.1 35.9 263 120-407 103-376 (380)
14 2pbi_B Guanine nucleotide-bind 100.0 5E-38 1.7E-42 290.0 41.1 249 122-403 103-354 (354)
15 1got_B GT-beta; complex (GTP-b 100.0 1.4E-38 4.9E-43 292.1 36.7 251 121-408 51-303 (340)
16 4gqb_B Methylosome protein 50; 100.0 1.8E-39 6.2E-44 297.8 29.7 262 123-409 28-292 (344)
17 3frx_A Guanine nucleotide-bind 100.0 1.2E-38 4.1E-43 289.9 34.3 272 116-407 7-318 (319)
18 3fm0_A Protein CIAO1; WDR39,SG 100.0 7.6E-39 2.6E-43 294.5 32.4 274 116-407 5-284 (345)
19 3iz6_a 40S ribosomal protein R 100.0 7.7E-39 2.6E-43 298.4 32.3 259 119-408 60-331 (380)
20 4g56_B MGC81050 protein; prote 100.0 6E-39 2.1E-43 296.4 30.3 258 122-409 39-304 (357)
21 2pbi_B Guanine nucleotide-bind 100.0 9.9E-38 3.4E-42 288.0 37.8 255 121-408 60-317 (354)
22 2hes_X YDR267CP; beta-propelle 100.0 8.6E-38 2.9E-42 285.7 35.2 259 124-406 57-328 (330)
23 3bg1_A Protein SEC13 homolog; 100.0 3E-39 1E-43 293.4 24.3 259 122-405 10-292 (316)
24 1nr0_A Actin interacting prote 100.0 8.3E-38 2.8E-42 309.3 36.4 264 121-409 55-358 (611)
25 2j04_B YDR362CP, TAU91; beta p 100.0 7.6E-38 2.6E-42 301.3 34.7 330 40-407 132-518 (524)
26 2hes_X YDR267CP; beta-propelle 100.0 2.1E-37 7.3E-42 283.0 33.6 265 121-407 10-281 (330)
27 4ery_A WD repeat-containing pr 100.0 2.1E-36 7.3E-41 274.2 38.7 260 120-405 18-311 (312)
28 2xzm_R RACK1; ribosome, transl 100.0 3.4E-36 1.2E-40 276.6 40.4 263 119-407 70-341 (343)
29 2pm9_A Protein WEB1, protein t 100.0 8.7E-38 3E-42 294.6 29.3 265 121-410 63-341 (416)
30 3i2n_A WD repeat-containing pr 100.0 3.2E-36 1.1E-40 277.8 38.3 308 41-407 18-354 (357)
31 4aow_A Guanine nucleotide-bind 100.0 9.1E-37 3.1E-41 279.6 34.2 275 114-408 26-339 (340)
32 4e54_B DNA damage-binding prot 100.0 9.5E-38 3.3E-42 296.4 28.4 269 121-409 115-433 (435)
33 2pm9_A Protein WEB1, protein t 100.0 2.9E-38 9.8E-43 297.9 24.6 337 21-407 47-415 (416)
34 1erj_A Transcriptional repress 100.0 1.9E-36 6.6E-41 283.5 36.0 263 116-408 55-343 (393)
35 1erj_A Transcriptional repress 100.0 1.8E-36 6.2E-41 283.7 34.0 245 123-406 121-389 (393)
36 2ymu_A WD-40 repeat protein; u 100.0 1.1E-35 3.7E-40 292.5 38.6 239 120-403 339-577 (577)
37 3k26_A Polycomb protein EED; W 100.0 2.6E-36 9.1E-41 279.2 30.7 251 123-406 67-366 (366)
38 2xzm_R RACK1; ribosome, transl 100.0 1.1E-35 3.6E-40 273.4 33.7 257 121-409 17-288 (343)
39 3dm0_A Maltose-binding peripla 100.0 8.9E-36 3E-40 299.4 34.3 269 121-405 378-692 (694)
40 4a11_B DNA excision repair pro 100.0 1.2E-34 4.1E-39 272.1 39.8 269 122-411 40-370 (408)
41 3f3f_A Nucleoporin SEH1; struc 100.0 2.1E-35 7.2E-40 270.8 33.9 275 122-408 8-339 (351)
42 4aez_A CDC20, WD repeat-contai 100.0 1.3E-34 4.5E-39 271.9 39.9 257 114-409 123-383 (401)
43 1nr0_A Actin interacting prote 100.0 1.1E-35 3.8E-40 294.1 33.1 245 124-408 17-272 (611)
44 3jrp_A Fusion protein of prote 100.0 1.1E-35 3.8E-40 276.3 30.6 259 121-406 7-287 (379)
45 3ei3_B DNA damage-binding prot 100.0 7E-35 2.4E-39 272.0 36.0 245 122-406 115-382 (383)
46 2j04_B YDR362CP, TAU91; beta p 100.0 2.6E-36 8.7E-41 290.7 26.2 262 121-411 129-433 (524)
47 3zwl_B Eukaryotic translation 100.0 1.4E-34 4.8E-39 267.8 36.9 274 114-410 21-350 (369)
48 1sq9_A Antiviral protein SKI8; 100.0 9.3E-35 3.2E-39 272.2 33.7 257 120-407 57-396 (397)
49 1gxr_A ESG1, transducin-like e 100.0 1.6E-33 5.3E-38 257.5 40.2 247 117-404 89-335 (337)
50 3dwl_C Actin-related protein 2 100.0 2.3E-36 7.8E-41 281.3 21.5 256 123-407 9-282 (377)
51 1r5m_A SIR4-interacting protei 100.0 3.4E-34 1.2E-38 270.4 36.7 243 123-408 106-363 (425)
52 2ymu_A WD-40 repeat protein; u 100.0 6.2E-34 2.1E-38 280.0 39.5 242 121-407 299-540 (577)
53 1gxr_A ESG1, transducin-like e 100.0 1.1E-33 3.9E-38 258.4 38.5 257 115-409 41-299 (337)
54 1k8k_C P40, ARP2/3 complex 41 100.0 2.1E-34 7.3E-39 267.2 33.3 307 42-407 9-362 (372)
55 4h5i_A Guanine nucleotide-exch 100.0 4.1E-35 1.4E-39 271.5 27.5 309 37-409 10-346 (365)
56 3odt_A Protein DOA1; ubiquitin 100.0 5E-33 1.7E-37 251.6 39.9 253 119-416 53-306 (313)
57 4gga_A P55CDC, cell division c 100.0 1.6E-33 5.5E-38 266.1 37.7 258 113-407 134-396 (420)
58 3dwl_C Actin-related protein 2 100.0 4E-35 1.4E-39 272.9 25.0 264 123-404 53-377 (377)
59 3k26_A Polycomb protein EED; W 100.0 1.7E-34 5.7E-39 267.1 28.5 262 122-408 15-320 (366)
60 1k8k_C P40, ARP2/3 complex 41 100.0 2.1E-34 7E-39 267.3 29.1 251 123-406 6-274 (372)
61 1sq9_A Antiviral protein SKI8; 100.0 3.5E-34 1.2E-38 268.3 30.5 258 123-408 14-324 (397)
62 3i2n_A WD repeat-containing pr 100.0 9.7E-34 3.3E-38 261.2 32.1 266 115-410 8-295 (357)
63 1r5m_A SIR4-interacting protei 100.0 2.5E-33 8.5E-38 264.5 34.8 257 121-405 145-424 (425)
64 3ei3_B DNA damage-binding prot 100.0 6.1E-34 2.1E-38 265.6 30.2 259 120-409 68-342 (383)
65 3dw8_B Serine/threonine-protei 100.0 1.3E-34 4.3E-39 275.7 25.2 266 122-409 25-376 (447)
66 3jro_A Fusion protein of prote 100.0 3.1E-34 1.1E-38 290.0 27.6 260 121-407 5-286 (753)
67 2aq5_A Coronin-1A; WD40 repeat 100.0 1.1E-33 3.8E-38 265.7 29.5 257 127-408 36-301 (402)
68 3vl1_A 26S proteasome regulato 100.0 8.2E-33 2.8E-37 261.0 34.4 254 123-406 137-419 (420)
69 3mkq_A Coatomer beta'-subunit; 100.0 6.5E-33 2.2E-37 283.6 35.1 250 121-408 9-261 (814)
70 3vl1_A 26S proteasome regulato 100.0 1.7E-33 5.9E-38 265.7 28.5 244 126-407 98-366 (420)
71 4ggc_A P55CDC, cell division c 100.0 1.2E-31 4E-36 243.2 38.5 253 117-406 59-315 (318)
72 2aq5_A Coronin-1A; WD40 repeat 100.0 1.4E-33 4.6E-38 265.1 26.4 260 122-409 78-345 (402)
73 3frx_A Guanine nucleotide-bind 100.0 7.3E-33 2.5E-37 251.7 29.9 217 169-408 8-229 (319)
74 2pm7_B Protein transport prote 100.0 1.3E-32 4.5E-37 247.5 30.6 219 172-407 3-239 (297)
75 3gre_A Serine/threonine-protei 100.0 1.3E-33 4.3E-38 268.2 25.1 272 122-409 60-362 (437)
76 3odt_A Protein DOA1; ubiquitin 100.0 3.6E-32 1.2E-36 245.9 33.5 244 120-409 13-258 (313)
77 1yfq_A Cell cycle arrest prote 100.0 1.2E-31 4.2E-36 245.7 35.9 279 43-403 13-321 (342)
78 3v7d_B Cell division control p 100.0 6.5E-32 2.2E-36 258.4 35.3 248 118-408 114-383 (464)
79 1yfq_A Cell cycle arrest prote 100.0 1.7E-32 5.9E-37 251.4 29.7 252 123-408 9-284 (342)
80 3dw8_B Serine/threonine-protei 100.0 9.5E-32 3.2E-36 255.8 34.5 319 43-405 30-445 (447)
81 3mkq_A Coatomer beta'-subunit; 100.0 1.6E-31 5.4E-36 273.4 38.6 286 43-407 15-303 (814)
82 3mmy_A MRNA export factor; mRN 100.0 2.2E-32 7.6E-37 252.9 28.2 248 121-404 35-344 (368)
83 3v7d_B Cell division control p 100.0 3.5E-31 1.2E-35 253.4 36.8 249 121-410 158-425 (464)
84 3gre_A Serine/threonine-protei 100.0 6.1E-33 2.1E-37 263.5 24.2 259 121-403 107-437 (437)
85 3sfz_A APAF-1, apoptotic pepti 100.0 6.8E-32 2.3E-36 288.2 35.1 249 119-406 609-913 (1249)
86 3bg1_A Protein SEC13 homolog; 100.0 3E-32 1E-36 247.4 27.5 255 43-349 15-293 (316)
87 4gq1_A NUP37; propeller, trans 100.0 2.6E-32 8.8E-37 255.4 27.6 238 138-405 101-388 (393)
88 4aez_A CDC20, WD repeat-contai 100.0 2.2E-31 7.4E-36 250.0 33.2 248 117-407 83-337 (401)
89 4e54_B DNA damage-binding prot 100.0 9.6E-33 3.3E-37 262.0 24.0 220 169-408 110-329 (435)
90 1p22_A F-BOX/WD-repeat protein 100.0 3.3E-31 1.1E-35 251.4 34.0 249 121-409 169-417 (435)
91 2xyi_A Probable histone-bindin 100.0 9.9E-32 3.4E-36 254.6 29.8 272 122-406 42-353 (430)
92 4ery_A WD repeat-containing pr 100.0 3.4E-31 1.2E-35 239.9 31.8 211 169-408 14-225 (312)
93 3sfz_A APAF-1, apoptotic pepti 100.0 6.7E-31 2.3E-35 280.6 37.0 267 121-409 653-1037(1249)
94 1pgu_A Actin interacting prote 100.0 2.5E-31 8.5E-36 263.1 30.9 253 123-408 16-285 (615)
95 1p22_A F-BOX/WD-repeat protein 100.0 1.3E-30 4.5E-35 247.3 33.2 238 122-408 130-367 (435)
96 2oaj_A Protein SNI1; WD40 repe 100.0 6.5E-31 2.2E-35 269.6 32.9 264 115-404 7-310 (902)
97 4a11_B DNA excision repair pro 100.0 2.5E-30 8.6E-35 242.6 33.6 312 19-405 23-404 (408)
98 1pgu_A Actin interacting prote 100.0 1.8E-30 6E-35 257.0 33.6 253 120-407 58-329 (615)
99 2vdu_B TRNA (guanine-N(7)-)-me 100.0 2.2E-29 7.5E-34 239.9 38.8 249 123-406 100-391 (450)
100 2oaj_A Protein SNI1; WD40 repe 100.0 1.7E-30 5.8E-35 266.5 32.8 243 41-347 17-310 (902)
101 2vdu_B TRNA (guanine-N(7)-)-me 100.0 3.1E-30 1E-34 245.9 32.1 266 125-404 4-337 (450)
102 4gga_A P55CDC, cell division c 100.0 1.5E-29 5.1E-34 238.9 35.6 243 127-408 107-355 (420)
103 3jrp_A Fusion protein of prote 100.0 6.6E-30 2.3E-34 237.3 32.0 251 43-349 13-287 (379)
104 4aow_A Guanine nucleotide-bind 100.0 2.8E-30 9.6E-35 236.4 28.8 220 168-408 28-248 (340)
105 2ovr_B FBW7, F-BOX/WD repeat p 100.0 2.3E-29 8E-34 239.4 36.1 236 122-409 156-394 (445)
106 3lrv_A PRE-mRNA-splicing facto 100.0 1.1E-30 3.7E-35 239.9 25.4 237 135-407 46-293 (343)
107 3f3f_A Nucleoporin SEH1; struc 100.0 1.4E-29 4.9E-34 231.9 32.6 265 43-351 13-339 (351)
108 3dm0_A Maltose-binding peripla 100.0 4.9E-30 1.7E-34 257.6 30.6 216 171-408 375-594 (694)
109 2j04_A TAU60, YPL007P, hypothe 100.0 2.4E-30 8.3E-35 243.7 26.3 245 123-405 13-296 (588)
110 3vu4_A KMHSV2; beta-propeller 100.0 3.1E-29 1.1E-33 231.2 31.8 238 121-408 15-273 (355)
111 2ovr_B FBW7, F-BOX/WD repeat p 100.0 1.4E-28 4.8E-33 234.1 34.9 237 121-407 195-443 (445)
112 4h5i_A Guanine nucleotide-exch 100.0 8.7E-30 3E-34 235.7 25.3 205 124-349 132-343 (365)
113 4ggc_A P55CDC, cell division c 100.0 4.2E-28 1.4E-32 219.8 33.5 243 128-409 28-276 (318)
114 1l0q_A Surface layer protein; 100.0 5.1E-28 1.7E-32 226.0 34.9 251 119-409 25-278 (391)
115 3vu4_A KMHSV2; beta-propeller 100.0 2.6E-27 8.8E-32 218.3 36.4 251 127-407 60-337 (355)
116 3jro_A Fusion protein of prote 100.0 1.1E-28 3.8E-33 249.4 29.0 253 43-351 11-287 (753)
117 3zwl_B Eukaryotic translation 100.0 7.1E-28 2.4E-32 222.7 31.4 215 166-408 20-251 (369)
118 2w18_A PALB2, fancn, partner a 100.0 7.1E-28 2.4E-32 213.5 29.7 257 112-405 21-356 (356)
119 3lrv_A PRE-mRNA-splicing facto 100.0 1.3E-27 4.4E-32 219.4 30.2 244 125-406 76-333 (343)
120 3bws_A Protein LP49; two-domai 100.0 6.2E-27 2.1E-31 221.7 32.1 244 123-406 167-432 (433)
121 3bws_A Protein LP49; two-domai 100.0 4.6E-27 1.6E-31 222.6 30.4 255 114-409 111-393 (433)
122 2j04_A TAU60, YPL007P, hypothe 100.0 1.8E-27 6.3E-32 224.2 25.7 244 122-394 82-349 (588)
123 4gq1_A NUP37; propeller, trans 100.0 9E-28 3.1E-32 224.6 22.5 280 123-409 13-351 (393)
124 3mmy_A MRNA export factor; mRN 100.0 1.9E-26 6.4E-31 213.0 29.3 254 43-349 41-346 (368)
125 1l0q_A Surface layer protein; 100.0 3.6E-26 1.2E-30 213.5 30.1 231 139-408 3-235 (391)
126 2w18_A PALB2, fancn, partner a 100.0 7.5E-27 2.6E-31 207.0 21.3 199 124-347 110-355 (356)
127 3hfq_A Uncharacterized protein 99.9 1.3E-24 4.6E-29 199.5 33.2 297 63-409 2-322 (347)
128 1ri6_A Putative isomerase YBHE 99.9 7.1E-24 2.4E-28 193.9 27.9 268 115-405 27-307 (343)
129 2hqs_A Protein TOLB; TOLB, PAL 99.9 1.5E-23 5.2E-28 197.1 30.0 245 120-409 112-390 (415)
130 3u4y_A Uncharacterized protein 99.9 1E-22 3.5E-27 185.5 30.9 253 124-409 39-307 (331)
131 3scy_A Hypothetical bacterial 99.9 7.9E-22 2.7E-26 182.1 36.6 299 63-409 13-342 (361)
132 2ojh_A Uncharacterized protein 99.9 8.8E-23 3E-27 182.2 28.4 243 120-396 36-293 (297)
133 2oit_A Nucleoporin 214KDA; NH2 99.9 9.6E-24 3.3E-28 199.2 22.9 216 126-351 37-280 (434)
134 2hqs_A Protein TOLB; TOLB, PAL 99.9 4.8E-22 1.6E-26 186.9 31.9 225 121-387 174-410 (415)
135 1nir_A Nitrite reductase; hemo 99.9 4.3E-22 1.5E-26 193.0 31.6 252 128-410 181-462 (543)
136 1nir_A Nitrite reductase; hemo 99.9 1.2E-21 4.1E-26 189.9 33.8 264 116-410 212-518 (543)
137 3vgz_A Uncharacterized protein 99.9 2.4E-21 8.1E-26 178.0 31.1 250 122-409 37-306 (353)
138 3u4y_A Uncharacterized protein 99.9 2.2E-21 7.4E-26 176.7 29.3 246 131-409 3-255 (331)
139 2oit_A Nucleoporin 214KDA; NH2 99.9 1.7E-22 5.7E-27 190.8 19.1 210 179-407 37-279 (434)
140 2ojh_A Uncharacterized protein 99.9 3.5E-21 1.2E-25 171.8 25.6 228 143-409 17-261 (297)
141 1ri6_A Putative isomerase YBHE 99.9 2.1E-21 7.2E-26 177.4 24.4 246 137-405 4-261 (343)
142 3vgz_A Uncharacterized protein 99.9 1E-19 3.5E-24 167.0 34.1 238 119-395 82-334 (353)
143 2ecf_A Dipeptidyl peptidase IV 99.9 2.7E-20 9.4E-25 188.3 28.5 242 126-406 109-413 (741)
144 1jof_A Carboxy-CIS,CIS-muconat 99.9 2E-19 6.9E-24 166.2 31.2 294 63-409 2-344 (365)
145 1pby_B Quinohemoprotein amine 99.9 4.7E-20 1.6E-24 168.0 26.3 246 120-409 25-313 (337)
146 2ecf_A Dipeptidyl peptidase IV 99.9 2.6E-20 8.8E-25 188.5 25.1 241 125-405 36-366 (741)
147 3o4h_A Acylamino-acid-releasin 99.9 3.9E-20 1.3E-24 181.9 23.3 233 125-404 21-274 (582)
148 1xfd_A DIP, dipeptidyl aminope 99.9 5.2E-20 1.8E-24 185.7 23.9 238 127-403 18-341 (723)
149 1jmx_B Amine dehydrogenase; ox 99.9 3.9E-19 1.3E-23 162.8 26.5 238 130-409 4-328 (349)
150 2z3z_A Dipeptidyl aminopeptida 99.8 2.3E-19 8E-24 180.4 26.1 258 120-408 115-437 (706)
151 3hfq_A Uncharacterized protein 99.8 2.3E-18 7.9E-23 157.8 29.0 223 115-348 74-316 (347)
152 2z3z_A Dipeptidyl aminopeptida 99.8 2.1E-19 7.2E-24 180.7 22.9 244 125-408 81-393 (706)
153 1xfd_A DIP, dipeptidyl aminope 99.8 6.5E-19 2.2E-23 177.7 24.1 246 127-406 62-393 (723)
154 1k32_A Tricorn protease; prote 99.8 3.3E-18 1.1E-22 179.2 28.0 246 122-408 200-463 (1045)
155 1k32_A Tricorn protease; prote 99.8 1.8E-18 6.3E-23 181.1 26.0 234 126-406 245-502 (1045)
156 3scy_A Hypothetical bacterial 99.8 2.7E-17 9.3E-22 151.6 28.2 241 140-405 15-290 (361)
157 3o4h_A Acylamino-acid-releasin 99.8 1.2E-17 4.1E-22 164.1 26.9 274 41-406 21-315 (582)
158 1pby_B Quinohemoprotein amine 99.8 1.4E-17 4.9E-22 151.4 22.6 229 139-408 2-271 (337)
159 3fvz_A Peptidyl-glycine alpha- 99.8 3.3E-16 1.1E-20 142.4 28.9 243 126-407 24-323 (329)
160 1z68_A Fibroblast activation p 99.8 5E-18 1.7E-22 171.1 16.7 240 130-408 20-348 (719)
161 1z68_A Fibroblast activation p 99.8 6.8E-17 2.3E-21 162.8 23.8 247 127-406 61-391 (719)
162 1q7f_A NHL, brain tumor CG1071 99.8 2.6E-15 9E-20 133.5 30.3 236 125-406 29-280 (286)
163 3pe7_A Oligogalacturonate lyas 99.8 1.6E-16 5.5E-21 147.8 23.0 250 123-409 28-332 (388)
164 4a5s_A Dipeptidyl peptidase 4 99.7 4.4E-16 1.5E-20 157.3 25.6 246 127-409 18-356 (740)
165 1jmx_B Amine dehydrogenase; ox 99.7 1.2E-15 4.2E-20 139.4 23.5 196 127-350 44-326 (349)
166 3pe7_A Oligogalacturonate lyas 99.7 7.9E-16 2.7E-20 143.0 21.4 243 124-405 79-381 (388)
167 3azo_A Aminopeptidase; POP fam 99.7 8.6E-16 2.9E-20 153.3 22.7 247 121-408 19-327 (662)
168 3e5z_A Putative gluconolactona 99.7 3.4E-14 1.1E-18 127.0 29.4 244 123-410 25-290 (296)
169 1jof_A Carboxy-CIS,CIS-muconat 99.7 4.7E-15 1.6E-19 136.8 24.1 209 126-349 83-341 (365)
170 2dg1_A DRP35, lactonase; beta 99.7 2.5E-13 8.5E-18 123.4 35.0 236 122-395 41-300 (333)
171 1rwi_B Serine/threonine-protei 99.7 4.4E-14 1.5E-18 124.3 27.2 241 127-410 25-268 (270)
172 2xdw_A Prolyl endopeptidase; a 99.7 5.2E-14 1.8E-18 141.4 30.8 252 124-408 123-416 (710)
173 3c5m_A Oligogalacturonate lyas 99.7 3.4E-15 1.2E-19 139.0 19.6 241 126-409 36-332 (396)
174 2oiz_A Aromatic amine dehydrog 99.7 1.5E-14 5.1E-19 133.0 22.8 220 146-407 29-335 (361)
175 3azo_A Aminopeptidase; POP fam 99.7 1E-14 3.4E-19 145.6 22.8 251 130-408 81-371 (662)
176 4a5s_A Dipeptidyl peptidase 4 99.6 1E-13 3.4E-18 140.0 27.9 204 129-350 65-354 (740)
177 1pjx_A Dfpase, DIISOPROPYLFLUO 99.6 1.1E-12 3.8E-17 117.9 28.5 245 125-407 17-300 (314)
178 2gop_A Trilobed protease; beta 99.6 2.7E-13 9.3E-18 123.8 24.5 224 126-405 59-330 (347)
179 3c5m_A Oligogalacturonate lyas 99.6 9.2E-14 3.1E-18 129.2 21.2 232 130-405 85-381 (396)
180 2dg1_A DRP35, lactonase; beta 99.6 1.8E-13 6.1E-18 124.4 22.5 247 125-407 5-264 (333)
181 2bkl_A Prolyl endopeptidase; m 99.6 1.6E-13 5.4E-18 137.5 23.2 251 124-408 119-399 (695)
182 2oiz_A Aromatic amine dehydrog 99.6 1.5E-12 5.1E-17 119.7 26.1 222 130-387 54-360 (361)
183 3fvz_A Peptidyl-glycine alpha- 99.6 1.4E-12 4.9E-17 118.3 25.5 201 124-349 89-322 (329)
184 1qks_A Cytochrome CD1 nitrite 99.6 8.1E-12 2.8E-16 120.9 32.0 269 118-407 189-478 (567)
185 2z2n_A Virginiamycin B lyase; 99.6 1.4E-11 4.9E-16 109.6 31.5 242 123-405 12-254 (299)
186 3dsm_A Uncharacterized protein 99.5 2.2E-12 7.4E-17 117.0 24.4 237 127-406 45-302 (328)
187 1q7f_A NHL, brain tumor CG1071 99.5 2.6E-12 8.8E-17 114.0 24.1 206 177-408 28-240 (286)
188 2gop_A Trilobed protease; beta 99.5 1.6E-12 5.6E-17 118.7 22.6 224 126-407 15-292 (347)
189 1qks_A Cytochrome CD1 nitrite 99.5 2.9E-11 1E-15 117.0 32.1 230 139-406 168-421 (567)
190 3g4e_A Regucalcin; six bladed 99.5 2.5E-11 8.4E-16 108.4 29.0 233 126-396 13-263 (297)
191 2z2n_A Virginiamycin B lyase; 99.5 8E-11 2.7E-15 104.7 31.7 242 124-408 55-297 (299)
192 3hrp_A Uncharacterized protein 99.5 2.7E-11 9.2E-16 113.0 29.4 240 126-404 131-408 (409)
193 1xip_A Nucleoporin NUP159; bet 99.5 1.5E-12 5E-17 119.0 19.5 180 127-335 39-230 (388)
194 2xdw_A Prolyl endopeptidase; a 99.5 3E-11 1E-15 121.3 30.3 205 128-351 173-416 (710)
195 1yr2_A Prolyl oligopeptidase; 99.5 9.3E-12 3.2E-16 125.6 26.7 251 126-408 163-443 (741)
196 3no2_A Uncharacterized protein 99.5 2.7E-11 9.3E-16 106.7 25.4 210 139-393 6-230 (276)
197 3e5z_A Putative gluconolactona 99.5 1E-11 3.6E-16 110.7 22.7 210 171-408 20-248 (296)
198 2ghs_A AGR_C_1268P; regucalcin 99.5 2.1E-10 7.2E-15 103.7 30.2 228 127-397 50-294 (326)
199 3iuj_A Prolyl endopeptidase; h 99.5 4.9E-11 1.7E-15 119.3 28.4 250 124-408 127-407 (693)
200 2qc5_A Streptogramin B lactona 99.4 5.8E-10 2E-14 99.2 31.3 242 124-406 18-260 (300)
201 1xip_A Nucleoporin NUP159; bet 99.4 9.8E-12 3.4E-16 113.6 18.5 178 180-392 39-230 (388)
202 2mad_H Methylamine dehydrogena 99.4 1.4E-09 4.8E-14 100.0 32.0 249 120-411 61-355 (373)
203 2bkl_A Prolyl endopeptidase; m 99.4 4E-11 1.4E-15 120.1 23.4 205 176-405 118-348 (695)
204 1rwi_B Serine/threonine-protei 99.4 1.2E-10 4.1E-15 102.1 23.4 199 125-350 66-265 (270)
205 2qc5_A Streptogramin B lactona 99.4 1.6E-09 5.6E-14 96.2 30.9 238 125-405 61-299 (300)
206 3dsm_A Uncharacterized protein 99.3 2.9E-10 1E-14 102.9 22.1 202 119-348 77-301 (328)
207 3dr2_A Exported gluconolactona 99.3 1.7E-09 5.9E-14 96.7 25.3 229 123-397 42-298 (305)
208 2qe8_A Uncharacterized protein 99.3 1.4E-10 4.9E-15 105.7 17.9 260 114-400 7-315 (343)
209 3no2_A Uncharacterized protein 99.3 5.3E-10 1.8E-14 98.4 20.5 183 193-409 7-198 (276)
210 3g4e_A Regucalcin; six bladed 99.2 5.4E-09 1.9E-13 93.1 25.3 209 177-409 11-232 (297)
211 3sjl_D Methylamine dehydrogena 99.2 4.6E-09 1.6E-13 95.6 24.8 251 118-410 71-367 (386)
212 1pjx_A Dfpase, DIISOPROPYLFLUO 99.2 4.2E-09 1.4E-13 94.3 23.8 201 124-349 69-299 (314)
213 3hrp_A Uncharacterized protein 99.2 2.6E-09 9E-14 99.5 23.0 198 179-409 131-357 (409)
214 3c75_H MADH, methylamine dehyd 99.2 5.3E-09 1.8E-13 96.9 24.0 256 117-410 110-406 (426)
215 1yr2_A Prolyl oligopeptidase; 99.2 1.6E-09 5.5E-14 109.2 21.9 203 177-405 161-392 (741)
216 3iuj_A Prolyl endopeptidase; h 99.2 1.8E-09 6E-14 108.0 21.2 208 177-408 127-361 (693)
217 2ece_A 462AA long hypothetical 99.1 9.6E-08 3.3E-12 87.7 28.1 232 132-393 88-399 (462)
218 1mda_H Methylamine dehydrogena 99.1 3.5E-09 1.2E-13 96.5 18.6 232 140-410 34-350 (368)
219 2ghs_A AGR_C_1268P; regucalcin 99.1 5.8E-08 2E-12 87.6 26.6 197 181-407 51-261 (326)
220 2mad_H Methylamine dehydrogena 99.1 8.4E-08 2.9E-12 88.1 25.8 205 127-352 126-353 (373)
221 1npe_A Nidogen, entactin; glyc 99.1 8.1E-07 2.8E-11 77.5 31.2 223 127-387 37-263 (267)
222 1npe_A Nidogen, entactin; glyc 99.1 8.3E-07 2.8E-11 77.4 30.4 229 148-409 10-241 (267)
223 2iwa_A Glutamine cyclotransfer 99.0 1E-07 3.5E-12 82.1 22.3 208 115-350 8-238 (266)
224 1mda_H Methylamine dehydrogena 99.0 2.6E-08 8.9E-13 90.7 19.4 213 118-350 58-347 (368)
225 1fwx_A Nitrous oxide reductase 99.0 3.3E-08 1.1E-12 93.9 20.6 249 136-409 100-434 (595)
226 3sjl_D Methylamine dehydrogena 99.0 1.6E-07 5.4E-12 85.5 22.6 244 131-409 38-323 (386)
227 3dr2_A Exported gluconolactona 99.0 9.3E-08 3.2E-12 85.4 20.9 205 171-408 37-269 (305)
228 2ece_A 462AA long hypothetical 99.0 1.6E-07 5.4E-12 86.3 22.2 213 184-405 87-351 (462)
229 2qe8_A Uncharacterized protein 98.9 7.7E-08 2.6E-12 87.5 19.3 214 179-407 17-279 (343)
230 3c75_H MADH, methylamine dehyd 98.9 1.5E-07 5.2E-12 87.2 20.7 249 136-409 83-362 (426)
231 2hz6_A Endoplasmic reticulum t 98.9 1.5E-09 5E-14 99.9 6.4 179 140-351 11-194 (369)
232 3nol_A Glutamine cyclotransfer 98.9 6.6E-07 2.2E-11 76.2 21.4 195 114-337 29-244 (262)
233 3hxj_A Pyrrolo-quinoline quino 98.9 8.5E-07 2.9E-11 79.7 23.3 218 140-408 109-326 (330)
234 2fp8_A Strictosidine synthase; 98.9 5.8E-06 2E-10 74.2 28.5 241 126-407 19-314 (322)
235 3v64_C Agrin; beta propeller, 98.8 2.8E-05 9.7E-10 70.5 33.0 241 126-407 34-276 (349)
236 1ijq_A LDL receptor, low-densi 98.8 2.8E-05 9.6E-10 69.5 31.7 229 147-407 9-239 (316)
237 3nok_A Glutaminyl cyclase; bet 98.8 5.9E-07 2E-11 76.5 19.2 191 115-337 42-254 (268)
238 3v65_B Low-density lipoprotein 98.8 1.6E-05 5.4E-10 73.3 30.2 240 128-407 79-319 (386)
239 2iwa_A Glutamine cyclotransfer 98.8 5.7E-07 1.9E-11 77.5 18.1 196 181-407 23-238 (266)
240 2hz6_A Endoplasmic reticulum t 98.8 5.1E-09 1.7E-13 96.3 5.4 180 193-409 11-195 (369)
241 3mbr_X Glutamine cyclotransfer 98.7 7E-06 2.4E-10 69.3 23.2 194 114-337 7-223 (243)
242 3v64_C Agrin; beta propeller, 98.7 8.8E-05 3E-09 67.3 31.8 206 124-351 71-277 (349)
243 3p5b_L Low density lipoprotein 98.7 0.0001 3.6E-09 68.1 32.6 230 147-407 91-321 (400)
244 3v65_B Low-density lipoprotein 98.7 4.4E-05 1.5E-09 70.3 29.5 206 124-351 114-320 (386)
245 2p4o_A Hypothetical protein; p 98.7 6.7E-05 2.3E-09 66.7 28.8 243 113-394 19-277 (306)
246 1kb0_A Quinohemoprotein alcoho 98.6 2.4E-06 8.2E-11 84.8 20.5 236 140-409 130-510 (677)
247 3hxj_A Pyrrolo-quinoline quino 98.6 3.8E-06 1.3E-10 75.5 19.8 175 193-405 109-283 (330)
248 3qqz_A Putative uncharacterize 98.6 5.4E-05 1.9E-09 64.7 25.4 206 124-346 25-250 (255)
249 3nol_A Glutamine cyclotransfer 98.6 4.6E-06 1.6E-10 71.0 17.9 198 176-394 38-244 (262)
250 1yiq_A Quinohemoprotein alcoho 98.6 1.3E-05 4.4E-10 79.8 24.1 237 140-409 123-508 (689)
251 3kya_A Putative phosphatase; s 98.6 8.5E-05 2.9E-09 69.8 27.7 269 127-416 140-485 (496)
252 3qqz_A Putative uncharacterize 98.6 0.00018 6.3E-09 61.5 27.3 208 174-404 22-251 (255)
253 1fwx_A Nitrous oxide reductase 98.6 2.1E-06 7.1E-11 81.7 16.6 212 121-349 129-431 (595)
254 1kb0_A Quinohemoprotein alcoho 98.5 2.3E-05 7.9E-10 77.8 24.1 201 182-408 246-569 (677)
255 3sov_A LRP-6, low-density lipo 98.5 0.00031 1.1E-08 62.7 29.3 227 147-408 12-240 (318)
256 3nok_A Glutaminyl cyclase; bet 98.5 9.5E-06 3.3E-10 69.1 17.9 193 181-394 57-254 (268)
257 1yiq_A Quinohemoprotein alcoho 98.4 7.1E-05 2.4E-09 74.4 25.2 82 295-393 454-536 (689)
258 3p5b_L Low density lipoprotein 98.4 0.00089 3E-08 61.8 31.1 213 122-352 108-323 (400)
259 3m0c_C LDL receptor, low-densi 98.4 0.00044 1.5E-08 69.3 30.8 230 147-407 403-633 (791)
260 3mbr_X Glutamine cyclotransfer 98.4 2.5E-05 8.5E-10 65.9 18.5 197 176-394 16-223 (243)
261 2xe4_A Oligopeptidase B; hydro 98.4 0.00021 7.2E-09 71.9 28.8 199 127-346 175-395 (751)
262 1ijq_A LDL receptor, low-densi 98.4 0.00036 1.2E-08 62.3 26.7 185 201-407 10-196 (316)
263 3sov_A LRP-6, low-density lipo 98.4 0.0009 3.1E-08 59.6 28.6 205 127-352 36-241 (318)
264 3tc9_A Hypothetical hydrolase; 98.4 0.00031 1.1E-08 65.6 26.0 242 127-405 138-429 (430)
265 4hw6_A Hypothetical protein, I 98.3 0.00047 1.6E-08 64.3 26.6 255 127-405 140-432 (433)
266 3q7m_A Lipoprotein YFGL, BAMB; 98.3 0.0016 5.6E-08 59.4 30.0 221 140-409 105-340 (376)
267 4a2l_A BT_4663, two-component 98.3 0.002 6.7E-08 65.4 32.7 242 125-410 214-484 (795)
268 3m0c_C LDL receptor, low-densi 98.3 0.001 3.5E-08 66.7 29.9 211 124-352 422-635 (791)
269 4a2l_A BT_4663, two-component 98.3 0.0012 4.1E-08 67.0 30.5 244 126-409 263-529 (795)
270 1n7d_A LDL receptor, low-densi 98.3 1E-05 3.5E-10 80.5 14.7 207 179-407 406-615 (699)
271 2fp8_A Strictosidine synthase; 98.3 0.00017 5.9E-09 64.5 21.7 208 179-407 19-270 (322)
272 2xe4_A Oligopeptidase B; hydro 98.3 0.00016 5.5E-09 72.8 23.6 201 180-404 175-396 (751)
273 3q7m_A Lipoprotein YFGL, BAMB; 98.3 0.00033 1.1E-08 64.0 23.9 218 140-403 145-375 (376)
274 2p4o_A Hypothetical protein; p 98.3 0.00049 1.7E-08 61.0 23.9 200 179-406 32-242 (306)
275 1k3i_A Galactose oxidase precu 98.2 0.00028 9.7E-09 69.8 24.1 260 112-410 174-501 (656)
276 3v9f_A Two-component system se 98.2 0.0031 1.1E-07 63.8 30.9 238 126-410 313-572 (781)
277 4a0p_A LRP6, LRP-6, low-densit 98.1 0.0086 3E-07 58.6 31.5 224 146-407 13-238 (628)
278 3v9f_A Two-component system se 98.1 0.0035 1.2E-07 63.4 29.2 252 125-409 257-527 (781)
279 1kv9_A Type II quinohemoprotei 98.1 0.00031 1.1E-08 69.6 20.1 155 140-310 119-337 (668)
280 4a0p_A LRP6, LRP-6, low-densit 98.1 0.0093 3.2E-07 58.4 30.0 202 126-351 37-239 (628)
281 1n7d_A LDL receptor, low-densi 98.0 3.8E-05 1.3E-09 76.4 13.0 209 125-352 405-617 (699)
282 3s94_A LRP-6, low-density lipo 98.0 0.0094 3.2E-07 58.3 27.8 229 146-408 16-245 (619)
283 3tc9_A Hypothetical hydrolase; 97.9 0.00073 2.5E-08 63.1 18.8 159 229-406 138-301 (430)
284 2ad6_A Methanol dehydrogenase 97.9 0.0016 5.6E-08 63.0 21.5 157 140-313 117-342 (571)
285 4hw6_A Hypothetical protein, I 97.9 0.0031 1.1E-07 58.8 22.5 206 180-405 140-373 (433)
286 2p9w_A MAL S 1 allergenic prot 97.9 0.0023 7.9E-08 56.4 19.5 207 126-348 13-264 (334)
287 2ism_A Putative oxidoreductase 97.8 0.016 5.6E-07 52.2 24.8 240 126-394 31-333 (352)
288 1kv9_A Type II quinohemoprotei 97.8 0.0065 2.2E-07 60.1 23.5 54 295-351 437-490 (668)
289 2ad6_A Methanol dehydrogenase 97.7 0.0068 2.3E-07 58.7 22.8 54 295-351 443-496 (571)
290 1k3i_A Galactose oxidase precu 97.7 0.00032 1.1E-08 69.5 13.5 234 128-395 245-530 (656)
291 1flg_A Protein (quinoprotein e 97.7 0.017 5.9E-07 55.9 24.8 59 250-313 291-362 (582)
292 3kya_A Putative phosphatase; s 97.7 0.00071 2.4E-08 63.6 14.4 171 229-405 140-340 (496)
293 3amr_A 3-phytase; beta-propell 97.6 0.02 6.8E-07 50.9 21.9 191 193-405 42-262 (355)
294 2p9w_A MAL S 1 allergenic prot 97.6 0.015 5E-07 51.3 20.1 162 174-349 8-215 (334)
295 1flg_A Protein (quinoprotein e 97.6 0.039 1.3E-06 53.5 25.0 81 295-392 465-546 (582)
296 1w6s_A Methanol dehydrogenase 97.5 0.027 9.2E-07 54.7 23.6 59 250-313 278-349 (599)
297 1w6s_A Methanol dehydrogenase 97.5 0.078 2.7E-06 51.5 27.3 54 295-351 452-505 (599)
298 3sre_A PON1, serum paraoxonase 97.4 0.026 8.8E-07 50.7 20.3 194 181-396 52-287 (355)
299 3s94_A LRP-6, low-density lipo 97.4 0.11 3.6E-06 50.8 32.0 161 179-349 349-510 (619)
300 3sre_A PON1, serum paraoxonase 97.4 0.063 2.2E-06 48.2 23.1 194 127-339 51-287 (355)
301 2xbg_A YCF48-like protein; pho 97.4 0.029 1E-06 50.0 20.1 194 125-347 121-320 (327)
302 3a9g_A Putative uncharacterize 97.2 0.12 4E-06 46.6 27.5 241 125-394 28-330 (354)
303 2xbg_A YCF48-like protein; pho 97.2 0.11 3.8E-06 46.2 26.5 234 126-404 80-320 (327)
304 2vpj_A Kelch-like protein 12; 97.1 0.052 1.8E-06 47.5 19.1 193 192-410 64-282 (301)
305 3amr_A 3-phytase; beta-propell 97.0 0.14 5E-06 45.4 20.0 156 147-313 98-271 (355)
306 3ii7_A Kelch-like protein 7; p 96.9 0.067 2.3E-06 47.0 17.5 233 138-410 12-276 (306)
307 2g8s_A Glucose/sorbosone dehyd 96.9 0.24 8.3E-06 44.5 25.4 256 126-405 18-351 (353)
308 3pbp_A Nucleoporin NUP82; beta 96.8 0.22 7.6E-06 45.3 20.1 154 236-401 29-207 (452)
309 2ism_A Putative oxidoreductase 96.8 0.094 3.2E-06 47.2 18.1 109 178-292 30-152 (352)
310 2xn4_A Kelch-like protein 2; s 96.8 0.084 2.9E-06 46.2 17.5 191 192-411 63-281 (302)
311 2xzh_A Clathrin heavy chain 1; 96.8 0.25 8.7E-06 43.3 29.0 236 131-407 72-333 (365)
312 3ei3_A DNA damage-binding prot 96.7 0.76 2.6E-05 48.3 28.0 149 186-349 839-999 (1158)
313 4asc_A Kelch repeat and BTB do 96.6 0.22 7.4E-06 43.9 18.9 105 239-350 98-222 (315)
314 1bpo_A Protein (clathrin); cla 96.6 0.44 1.5E-05 43.6 29.9 234 131-407 71-332 (494)
315 3a9g_A Putative uncharacterize 96.5 0.36 1.2E-05 43.4 19.6 217 178-406 28-296 (354)
316 3das_A Putative oxidoreductase 96.4 0.51 1.7E-05 42.1 25.4 244 124-394 30-326 (347)
317 1tl2_A L10, protein (tachylect 96.3 0.3 1E-05 40.2 15.6 136 192-343 5-157 (236)
318 1xi4_A Clathrin heavy chain; a 96.2 0.48 1.6E-05 50.0 20.3 207 183-409 70-292 (1630)
319 1zgk_A Kelch-like ECH-associat 96.1 0.23 7.9E-06 43.5 15.8 149 240-410 122-291 (308)
320 2g8s_A Glucose/sorbosone dehyd 96.1 0.71 2.4E-05 41.4 20.2 152 179-335 18-214 (353)
321 2woz_A Kelch repeat and BTB do 96.1 0.45 1.6E-05 41.8 17.8 104 240-350 110-232 (318)
322 1xi4_A Clathrin heavy chain; a 96.0 0.69 2.4E-05 48.9 20.1 195 132-352 72-292 (1630)
323 3pbp_A Nucleoporin NUP82; beta 95.9 1 3.4E-05 41.1 21.3 149 135-301 30-208 (452)
324 3ei3_A DNA damage-binding prot 95.7 2.6 8.8E-05 44.4 29.3 199 115-334 543-753 (1158)
325 1cru_A Protein (soluble quinop 95.7 0.8 2.7E-05 42.7 17.9 110 177-292 25-162 (454)
326 2vpj_A Kelch-like protein 12; 95.6 0.37 1.3E-05 42.0 14.8 189 139-349 64-278 (301)
327 2xn4_A Kelch-like protein 2; s 95.5 0.36 1.2E-05 42.0 14.5 144 193-350 111-277 (302)
328 1cru_A Protein (soluble quinop 95.4 1.7 6E-05 40.4 26.4 112 125-247 26-162 (454)
329 3ii7_A Kelch-like protein 7; p 95.2 0.42 1.4E-05 41.7 13.8 187 139-350 57-273 (306)
330 2xzh_A Clathrin heavy chain 1; 94.8 1.9 6.7E-05 37.8 24.7 205 123-349 104-332 (365)
331 1sqj_A OXG-RCBH, oligoxylogluc 94.8 3.6 0.00012 41.4 20.7 159 125-295 14-190 (789)
332 2uvk_A YJHT; unknown function, 94.6 0.78 2.7E-05 41.0 14.2 30 385-415 316-351 (357)
333 1bpo_A Protein (clathrin); cla 94.5 2.8 9.6E-05 38.4 25.2 205 123-349 103-331 (494)
334 1zgk_A Kelch-like ECH-associat 94.4 0.52 1.8E-05 41.2 12.3 103 240-349 169-287 (308)
335 4asc_A Kelch repeat and BTB do 94.2 2.5 8.5E-05 36.9 16.3 62 240-305 149-221 (315)
336 3b7f_A Glycosyl hydrolase, BNR 93.4 4.4 0.00015 36.6 18.7 158 179-343 177-366 (394)
337 2woz_A Kelch repeat and BTB do 93.1 4.1 0.00014 35.5 16.0 62 240-305 159-231 (318)
338 3das_A Putative oxidoreductase 92.9 4.8 0.00016 35.8 24.0 157 174-335 27-218 (347)
339 1tl2_A L10, protein (tachylect 92.7 3.6 0.00012 33.8 16.3 114 126-253 41-157 (236)
340 3q6k_A 43.2 kDa salivary prote 92.5 5.8 0.0002 35.7 18.6 157 227-394 151-342 (381)
341 3ott_A Two-component system se 92.3 9.8 0.00033 37.9 25.3 194 127-350 374-587 (758)
342 3b7f_A Glycosyl hydrolase, BNR 92.0 6.8 0.00023 35.4 26.4 148 180-336 116-296 (394)
343 2zwa_A Leucine carboxyl methyl 91.4 3.1 0.00011 41.1 13.9 108 240-350 501-636 (695)
344 2cn3_A Xyloglucanase, beta-1,4 91.4 12 0.00042 37.1 20.4 110 126-248 23-152 (737)
345 3ott_A Two-component system se 90.9 14 0.00048 36.8 29.9 232 125-409 21-263 (758)
346 3s25_A Hypothetical 7-bladed b 90.8 7.7 0.00026 33.7 19.6 103 234-349 110-216 (302)
347 2zwa_A Leucine carboxyl methyl 90.4 11 0.00038 37.1 16.8 111 136-261 451-579 (695)
348 2wg3_C Hedgehog-interacting pr 89.6 5.8 0.0002 36.9 13.3 114 179-293 14-157 (463)
349 2uvk_A YJHT; unknown function, 89.3 3.3 0.00011 36.8 11.2 19 139-157 67-95 (357)
350 3sbq_A Nitrous-oxide reductase 88.1 2.4 8.2E-05 40.1 9.2 96 252-349 300-408 (638)
351 2be1_A Serine/threonine-protei 86.7 2.1 7.3E-05 37.9 7.9 113 193-315 12-139 (339)
352 3s25_A Hypothetical 7-bladed b 83.9 20 0.0007 31.0 20.7 141 184-349 109-255 (302)
353 1sqj_A OXG-RCBH, oligoxylogluc 81.6 46 0.0016 33.3 16.6 156 178-339 14-190 (789)
354 2be1_A Serine/threonine-protei 75.0 44 0.0015 29.5 15.9 110 140-262 12-133 (339)
355 4gq2_M Nucleoporin NUP120; bet 62.2 21 0.00073 36.6 8.2 34 376-410 237-270 (950)
356 3a0f_A Xyloglucanase; beta-pro 62.1 1.3E+02 0.0044 29.9 20.3 163 123-296 18-203 (763)
357 3sbq_A Nitrous-oxide reductase 60.2 70 0.0024 30.5 10.4 81 177-259 321-408 (638)
358 2cn3_A Xyloglucanase, beta-1,4 57.5 1.5E+02 0.0052 29.2 18.6 111 180-294 24-152 (737)
359 4gq2_M Nucleoporin NUP120; bet 56.0 30 0.001 35.6 8.1 34 180-214 237-270 (950)
360 4fhn_B Nucleoporin NUP120; pro 50.8 25 0.00087 36.9 6.7 33 376-409 239-271 (1139)
361 3qhy_B Beta-lactamase inhibito 45.7 1.4E+02 0.0047 25.3 22.2 222 127-406 25-246 (282)
362 3kci_A Probable E3 ubiquitin-p 42.2 1.8E+02 0.0063 25.8 24.2 250 140-406 64-345 (389)
363 2wg3_C Hedgehog-interacting pr 40.6 2.2E+02 0.0075 26.2 31.7 260 126-405 14-370 (463)
364 3f7f_A Nucleoporin NUP120; nuc 40.6 65 0.0022 31.6 7.2 33 318-353 222-254 (729)
365 4hvt_A Ritya.17583.B, post-pro 39.0 2.9E+02 0.01 27.1 18.4 210 182-407 132-382 (711)
366 3zwu_A Alkaline phosphatase PH 34.1 3.2E+02 0.011 26.1 14.3 59 276-336 478-549 (592)
367 4hvt_A Ritya.17583.B, post-pro 33.8 3.5E+02 0.012 26.5 24.4 246 129-405 132-429 (711)
368 3a0f_A Xyloglucanase; beta-pro 31.2 4E+02 0.014 26.4 18.6 158 177-340 19-203 (763)
369 4a9v_A PHOX; hydrolase, beta-p 26.9 3E+02 0.01 26.3 9.0 64 275-340 477-553 (592)
370 3zwu_A Alkaline phosphatase PH 25.4 2.8E+02 0.0097 26.5 8.8 20 374-393 530-549 (592)
371 1ukf_A Avirulence protein AVRP 23.3 49 0.0017 26.0 2.5 38 374-411 118-155 (188)
372 3kci_A Probable E3 ubiquitin-p 22.5 4E+02 0.014 23.5 23.1 211 127-350 106-346 (389)
373 4a9v_A PHOX; hydrolase, beta-p 22.4 4.7E+02 0.016 24.9 9.4 21 375-395 531-551 (592)
374 3q6k_A 43.2 kDa salivary prote 21.9 4.3E+02 0.015 23.6 21.5 156 180-336 153-341 (381)
No 1
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=100.00 E-value=8.8e-67 Score=495.44 Aligned_cols=409 Identities=66% Similarity=1.148 Sum_probs=331.7
Q ss_pred hhhhhhhhhhhhhHHHHHhHHhcChhHHHHhhhcCCCCCccEEEEccCCCCCCCCCCceEEEEEeecCCCCCCCeEEEEE
Q 014454 5 EEEMRGEIEERLINEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEPPGKDYSVQKMILGTHTSENEPNYLMLAQ 84 (424)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~wk~~~~~~y~~~~~~~~~~p~~~~~~~p~~~~~~~~~~~~~~~~~gt~~~~~~~~~i~i~~ 84 (424)
+|+++++.+++.++|||++||||+|+|||+++++.++||||+++|+|+..+..+.+++.+++++||++.+ ..|+|++++
T Consensus 9 ~~~~~~~~~~~~~~~~~~~wk~n~~~~y~~~~~~~l~wp~l~~~~~p~~~~~~~~~~~~~~~~~GT~t~~-~~n~i~i~~ 87 (430)
T 2xyi_A 9 AESFDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTKQDGKDYSVHRLILGTHTSD-EQNHLLIAS 87 (430)
T ss_dssp --CHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEECSSCCSCEEECSCCEECTTCSCEEEEEEEECCCSS-SCEEEEEEE
T ss_pred ccccccchhhhhhhHHHhhHhhCChHHHHHHhhcCCCCCceEEEECcccccccCCCcceEEEEEEEcCCC-CCCEEEEEE
Confidence 4445667788999999999999999999999999999999999999998877777888999999999988 899999999
Q ss_pred EECCCCCCCcccCCCCCcCCCCCCCCCCCCcEEEEEEeccCCceeEEEecCCCCcEEEEEeCCCeEEEEeCCCCCCCCCC
Q 014454 85 VQLPLDDSENDARHYDDDRSDFGGFGCANGKVQIIQQINHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPL 164 (424)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~latg~~dg~v~iw~~~~~~~~~~~ 164 (424)
+.+|......+...++++..++..++...++++....+.|.+.|++++|+|+++.+||+|+.+|.|+||++.........
T Consensus 88 ~~lp~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~lat~~~dg~V~vwd~~~~~~~~~~ 167 (430)
T 2xyi_A 88 VQLPSEDAQFDGSHYDNEKGEFGGFGSVCGKIEIEIKINHEGEVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEP 167 (430)
T ss_dssp EEEC--------------------------CEEEEEEEEESSCCSEEEEETTEEEEEEEECSSSCEEEEEGGGSCSSCCT
T ss_pred EECCCCccccccccccccccccccccCCCCceEEEEEEcCCCcEEEEEECCCCCcEEEEECCCCcEEEEECCCcccccCc
Confidence 99886544444455666666777777778899999999999999999999986679999999999999999864333322
Q ss_pred CCCCCCcEEEecCCCceeEEEecCCCCceEEEEeCCCcEEEEeCCCCCCC-CcccceeeeecCCccEeeEEEecCCCcEE
Q 014454 165 DGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKN-KSLEAMQIFKVHEGVVEDVAWHLRHEYLF 243 (424)
Q Consensus 165 ~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~~~ 243 (424)
.....+...+.+|...|++++|+|++..+|++|+.||.|++|++...... ..+.....+..|...|.+++|+|.+..+|
T Consensus 168 ~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l 247 (430)
T 2xyi_A 168 SGECQPDLRLRGHQKEGYGLSWNPNLNGYLLSASDDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLF 247 (430)
T ss_dssp TCCCCCSEEEECCSSCCCCEEECTTSTTEEEEECTTSCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEE
T ss_pred cccCCCcEEecCCCCCeEEEEeCCCCCCeEEEEeCCCeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEE
Confidence 23457788899999999999999998878999999999999999875332 22233456678999999999999777899
Q ss_pred EEEeCCCeEEEEEcCCCCCCCCeeeeeccCCCeeEEEecCCCCeEEEEEeCCCcEEEEECCCCCCcceEecCCCCCEEEE
Q 014454 244 GSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATGSTDKTVKLFDLRKISTALHTFDSHKEEVFQV 323 (424)
Q Consensus 244 ~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~~h~~~v~~~ 323 (424)
++++.||.|++||+++....+++..+..|...|++++|+|+++++|++|+.||.|++||++....++..+..|...|+++
T Consensus 248 ~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~h~~~v~~i 327 (430)
T 2xyi_A 248 GSVADDQKLMIWDTRNNNTSKPSHTVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQV 327 (430)
T ss_dssp EEEETTSEEEEEETTCSCSSSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEECCSSCEEEE
T ss_pred EEEeCCCeEEEEECCCCCCCcceeEeecCCCCeEEEEeCCCCCCEEEEEeCCCeEEEEeCCCCCCCeEEeecCCCCEEEE
Confidence 99999999999999987544567777899999999999999988899999999999999998778899999999999999
Q ss_pred EEcCCCCcEEEEEECCCeEEEeeCCCCCcccCCCCcCCCCCeeeEEEcCCCCCcceEEeCCCCCcEEEEEeCCCcEEEEe
Q 014454 324 GWNPKNETILASCCLGRRLMVWDLSRIDEEQTPEDAEDGPPELLFIHGGHTSKISDFSWNPCEDWVISSVAEDNILQIWQ 403 (424)
Q Consensus 324 ~~sp~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~vw~ 403 (424)
+|+|+++.+|++++.||.|+|||++.....+......++++.+++.+.+|...|++++|+|+++++|++++.||.|+||+
T Consensus 328 ~~sp~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~s~dg~i~iw~ 407 (430)
T 2xyi_A 328 QWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWIICSVSEDNIMQVWQ 407 (430)
T ss_dssp EECSSCTTEEEEEETTSCCEEEEGGGTTCCCCHHHHHHCCTTEEEECCCCSSCEEEEEECSSSTTEEEEEETTSEEEEEE
T ss_pred EECCCCCCEEEEEeCCCcEEEEeCCCCccccCccccccCCcceEEEcCCCCCCceEEEECCCCCCEEEEEECCCCEEEeE
Confidence 99999988999999999999999988654443333344566889999999999999999999998899999999999999
Q ss_pred cCCccCCCCCC
Q 014454 404 MAENIYHDEDD 414 (424)
Q Consensus 404 ~~~~~~~~~~~ 414 (424)
+..+.+.++++
T Consensus 408 ~~~~~~~~~~~ 418 (430)
T 2xyi_A 408 MAENVYNDEEP 418 (430)
T ss_dssp ECHHHHCC---
T ss_pred cccccccCCCc
Confidence 99998876544
No 2
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=1e-43 Score=325.95 Aligned_cols=256 Identities=21% Similarity=0.287 Sum_probs=215.4
Q ss_pred EeccCCceeEEEecCCCCcEEEEEeCCCeEEEEeCCCCCCCCCCCCCCCC--cEEEecCCCceeEEEecCCCCceEEEEe
Q 014454 121 QINHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSP--DLRLRGHSTEGYGLSWSKFKEGHLLSGS 198 (424)
Q Consensus 121 ~~~h~~~v~~~~~~p~~~~~latg~~dg~v~iw~~~~~~~~~~~~~~~~~--~~~~~~h~~~v~~l~~~~~~~~~l~s~~ 198 (424)
.+.|...|++++|+|++ .|++|+.||+|+|||+.+. .... ...+.+|...|++|+|+|++. +|++|+
T Consensus 78 ~~~~~~~v~~~~~s~d~--~l~~~s~dg~v~lWd~~~~--------~~~~~~~~~~~~H~~~V~~v~~spdg~-~l~sgs 146 (344)
T 4gqb_B 78 GVQTEAGVADLTWVGER--GILVASDSGAVELWELDEN--------ETLIVSKFCKYEHDDIVSTVSVLSSGT-QAVSGS 146 (344)
T ss_dssp EEEESSCEEEEEEETTT--EEEEEETTSEEEEEEECTT--------SSCEEEEEEEECCSSCEEEEEECTTSS-EEEEEE
T ss_pred eeccCCCEEEEEEeCCC--eEEEEECCCEEEEEeccCC--------CceeEeeccccCCCCCEEEEEECCCCC-EEEEEe
Confidence 45678899999999975 5789999999999999872 1211 234558999999999999988 799999
Q ss_pred CCCcEEEEeCCCCCCCCcccceeeeecCCccEeeEEEecCCCcEEEEEeCCCeEEEEEcCCCCCCCCeeee--eccCCCe
Q 014454 199 DDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSV--VAHQSEV 276 (424)
Q Consensus 199 ~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~dg~i~i~d~~~~~~~~~~~~~--~~~~~~v 276 (424)
.||+|++||++++ ..+..+.+|...|++++|++++..+|++++.|++|++||+++++. ...+ ..+...+
T Consensus 147 ~d~~i~iwd~~~~------~~~~~~~~h~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~---~~~~~~~~~~~~~ 217 (344)
T 4gqb_B 147 KDICIKVWDLAQQ------VVLSSYRAHAAQVTCVAASPHKDSVFLSCSEDNRILLWDTRCPKP---ASQIGCSAPGYLP 217 (344)
T ss_dssp TTSCEEEEETTTT------EEEEEECCCSSCEEEEEECSSCTTEEEEEETTSCEEEEETTSSSC---EEECC----CCCE
T ss_pred CCCeEEEEECCCC------cEEEEEcCcCCceEEEEecCCCCCceeeeccccccccccccccce---eeeeecceeeccc
Confidence 9999999999876 456778899999999999999988889999999999999998764 4443 3456679
Q ss_pred eEEEecCCCCeEEEEEeCCCcEEEEECCCCCCcceEecCCCCCEEEEEEcCCCCcEEEEEECCCeEEEeeCCCCCcccCC
Q 014454 277 NCLAFNPFNEWILATGSTDKTVKLFDLRKISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTP 356 (424)
Q Consensus 277 ~~v~~~~~~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~l~s~~~dg~i~iwd~~~~~~~~~~ 356 (424)
++++|+|++..+|++|+.||+|++||+++ ++++..+.+|...|++++|+|++..+|++|+.|++|+|||++.+
T Consensus 218 ~~~~~~p~~~~~l~sg~~dg~v~~wd~~~-~~~~~~~~~h~~~v~~v~fsp~g~~~lasgs~D~~i~vwd~~~~------ 290 (344)
T 4gqb_B 218 TSLAWHPQQSEVFVFGDENGTVSLVDTKS-TSCVLSSAVHSQCVTGLVFSPHSVPFLASLSEDCSLAVLDSSLS------ 290 (344)
T ss_dssp EEEEECSSCTTEEEEEETTSEEEEEESCC---CCEEEECCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTCC------
T ss_pred eeeeecCCCCcceEEeccCCcEEEEECCC-CcEEEEEcCCCCCEEEEEEccCCCeEEEEEeCCCeEEEEECCCC------
Confidence 99999998877899999999999999998 78899999999999999999998778999999999999999763
Q ss_pred CCcCCCCCeeeEEEcCCCCCcceEEeCCCCCcEEEEEeCCCcEEEEecCCccCCCC
Q 014454 357 EDAEDGPPELLFIHGGHTSKISDFSWNPCEDWVISSVAEDNILQIWQMAENIYHDE 412 (424)
Q Consensus 357 ~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~~~~ 412 (424)
+ +..+.+|...|++++|+|+++++|+|+|.|++|++|++.+..+...
T Consensus 291 --------~-~~~~~~H~~~V~~v~~sp~~~~llas~s~D~~v~~w~v~~~~~~~p 337 (344)
T 4gqb_B 291 --------E-LFRSQAHRDFVRDATWSPLNHSLLTTVGWDHQVVHHVVPTEPLPAP 337 (344)
T ss_dssp --------E-EEEECCCSSCEEEEEECSSSTTEEEEEETTSCEEEEECCC------
T ss_pred --------c-EEEEcCCCCCEEEEEEeCCCCeEEEEEcCCCeEEEEECCCCCCCCC
Confidence 2 4457899999999999999988899999999999999988765443
No 3
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=9.3e-41 Score=303.91 Aligned_cols=286 Identities=16% Similarity=0.305 Sum_probs=240.1
Q ss_pred CccEEEEccCCCCCCCCCCceEEEEEeecCCCCCCCeEEEEEEECCCCCCCcccCCCCCcCCCCCCCCCCCCcEEE-EEE
Q 014454 43 PSLTVEWLPDREEPPGKDYSVQKMILGTHTSENEPNYLMLAQVQLPLDDSENDARHYDDDRSDFGGFGCANGKVQI-IQQ 121 (424)
Q Consensus 43 p~~~~~~~p~~~~~~~~~~~~~~~~~gt~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 121 (424)
+..++.|.|+.... ...++.|+ .+..++++.+.-. .... ...
T Consensus 34 ~V~~v~~~~~~~~~------~~~l~tgs-----~D~~v~vW~~~~~--------------------------~~~~~~~l 76 (321)
T 3ow8_A 34 AIWSVAWGTNKKEN------SETVVTGS-----LDDLVKVWKWRDE--------------------------RLDLQWSL 76 (321)
T ss_dssp CEEEEEEC-------------CEEEEEE-----TTSCEEEEEEETT--------------------------EEEEEEEE
T ss_pred cEEEEEEecCCCCC------CCEEEEEc-----CCCCEEEEECCCC--------------------------Ceeeeeee
Confidence 47899998875322 13455554 5567899887411 2222 234
Q ss_pred eccCCceeEEEecCCCCcEEEEEeCCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCceeEEEecCCCCceEEEEeCCC
Q 014454 122 INHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDDA 201 (424)
Q Consensus 122 ~~h~~~v~~~~~~p~~~~~latg~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg 201 (424)
.+|...|.+++|+|++. ++++|+.|++|++||+.+ ......+..|...+.+++|+|++. +|++|+.||
T Consensus 77 ~gh~~~v~~~~~~~~~~-~l~s~s~D~~i~lWd~~~----------~~~~~~~~~~~~~~~~~~~spdg~-~l~~g~~dg 144 (321)
T 3ow8_A 77 EGHQLGVVSVDISHTLP-IAASSSLDAHIRLWDLEN----------GKQIKSIDAGPVDAWTLAFSPDSQ-YLATGTHVG 144 (321)
T ss_dssp CCCSSCEEEEEECSSSS-EEEEEETTSEEEEEETTT----------TEEEEEEECCTTCCCCEEECTTSS-EEEEECTTS
T ss_pred ccCCCCEEEEEECCCCC-EEEEEeCCCcEEEEECCC----------CCEEEEEeCCCccEEEEEECCCCC-EEEEEcCCC
Confidence 57999999999999886 899999999999999987 455677888999999999999988 799999999
Q ss_pred cEEEEeCCCCCCCCcccceeeeecCCccEeeEEEecCCCcEEEEEeCCCeEEEEEcCCCCCCCCeeeeeccCCCeeEEEe
Q 014454 202 QICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAF 281 (424)
Q Consensus 202 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~v~~ 281 (424)
.|++|+++.+. ....+..|...|.+++|+|++. +|++|+.||.|++||+++++. +..+.+|..+|++++|
T Consensus 145 ~v~i~~~~~~~------~~~~~~~~~~~v~~~~~spdg~-~lasg~~dg~i~iwd~~~~~~---~~~~~~h~~~v~~l~~ 214 (321)
T 3ow8_A 145 KVNIFGVESGK------KEYSLDTRGKFILSIAYSPDGK-YLASGAIDGIINIFDIATGKL---LHTLEGHAMPIRSLTF 214 (321)
T ss_dssp EEEEEETTTCS------EEEEEECSSSCEEEEEECTTSS-EEEEEETTSCEEEEETTTTEE---EEEECCCSSCCCEEEE
T ss_pred cEEEEEcCCCc------eeEEecCCCceEEEEEECCCCC-EEEEEcCCCeEEEEECCCCcE---EEEEcccCCceeEEEE
Confidence 99999998763 3455667888999999999987 567999999999999998653 7778889999999999
Q ss_pred cCCCCeEEEEEeCCCcEEEEECCCCCCcceEecCCCCCEEEEEEcCCCCcEEEEEECCCeEEEeeCCCCCcccCCCCcCC
Q 014454 282 NPFNEWILATGSTDKTVKLFDLRKISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPEDAED 361 (424)
Q Consensus 282 ~~~~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~ 361 (424)
+|++. +|++|+.|+.|++||++. ...+..+.+|...|.+++|+|++. +|++++.|++|+|||++++
T Consensus 215 spd~~-~l~s~s~dg~i~iwd~~~-~~~~~~~~~h~~~v~~~~~sp~~~-~l~s~s~D~~v~iwd~~~~----------- 280 (321)
T 3ow8_A 215 SPDSQ-LLVTASDDGYIKIYDVQH-ANLAGTLSGHASWVLNVAFCPDDT-HFVSSSSDKSVKVWDVGTR----------- 280 (321)
T ss_dssp CTTSC-EEEEECTTSCEEEEETTT-CCEEEEECCCSSCEEEEEECTTSS-EEEEEETTSCEEEEETTTT-----------
T ss_pred cCCCC-EEEEEcCCCeEEEEECCC-cceeEEEcCCCCceEEEEECCCCC-EEEEEeCCCcEEEEeCCCC-----------
Confidence 99998 699999999999999998 678889999999999999999996 7999999999999999874
Q ss_pred CCCeeeEEEcCCCCCcceEEeCCCCCcEEEEEeCCCcEEEEecC
Q 014454 362 GPPELLFIHGGHTSKISDFSWNPCEDWVISSVAEDNILQIWQMA 405 (424)
Q Consensus 362 ~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~vw~~~ 405 (424)
.++..+.+|...|++++|+|+++ .|++++.||.|+|||+.
T Consensus 281 ---~~~~~~~~h~~~v~~v~~s~~g~-~l~s~~~d~~i~vwd~p 320 (321)
T 3ow8_A 281 ---TCVHTFFDHQDQVWGVKYNGNGS-KIVSVGDDQEIHIYDCP 320 (321)
T ss_dssp ---EEEEEECCCSSCEEEEEECTTSS-EEEEEETTCCEEEEECC
T ss_pred ---EEEEEEcCCCCcEEEEEECCCCC-EEEEEeCCCeEEEEeCC
Confidence 66788889999999999999999 68999999999999963
No 4
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=3.4e-41 Score=304.59 Aligned_cols=251 Identities=22% Similarity=0.339 Sum_probs=218.3
Q ss_pred eccCCceeEEEecCCCCcEEEEEeCCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCceeEEEecCCCCceEEEEeCCC
Q 014454 122 INHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDDA 201 (424)
Q Consensus 122 ~~h~~~v~~~~~~p~~~~~latg~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg 201 (424)
.+|.+.|++++|+|+++ +||+|+.||.|+|||+.+ ......+..|...|.+++|+|++. +|++|+.|+
T Consensus 10 ~~h~~~V~~~~fsp~~~-~l~s~~~dg~v~lWd~~~----------~~~~~~~~~~~~~v~~~~~~~~~~-~l~s~s~d~ 77 (304)
T 2ynn_A 10 SNRSDRVKGIDFHPTEP-WVLTTLYSGRVELWNYET----------QVEVRSIQVTETPVRAGKFIARKN-WIIVGSDDF 77 (304)
T ss_dssp EEECSCEEEEEECSSSS-EEEEEETTSEEEEEETTT----------TEEEEEEECCSSCEEEEEEEGGGT-EEEEEETTS
T ss_pred cCCCCceEEEEECCCCC-EEEEEcCCCcEEEEECCC----------CceeEEeeccCCcEEEEEEeCCCC-EEEEECCCC
Confidence 47999999999999987 899999999999999987 455678889999999999999887 799999999
Q ss_pred cEEEEeCCCCCCCCcccceeeeecCCccEeeEEEecCCCcEEEEEeCCCeEEEEEcCCCCCCCCeeeeeccCCCeeEEEe
Q 014454 202 QICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAF 281 (424)
Q Consensus 202 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~v~~ 281 (424)
.|++||+.++. .+..+.+|...|.+++|+|+++ ++++|+.||+|++||++++.. ....+.+|...|++++|
T Consensus 78 ~i~vwd~~~~~------~~~~~~~h~~~v~~~~~~~~~~-~l~sgs~D~~v~lWd~~~~~~--~~~~~~~h~~~v~~v~~ 148 (304)
T 2ynn_A 78 RIRVFNYNTGE------KVVDFEAHPDYIRSIAVHPTKP-YVLSGSDDLTVKLWNWENNWA--LEQTFEGHEHFVMCVAF 148 (304)
T ss_dssp EEEEEETTTCC------EEEEEECCSSCEEEEEECSSSS-EEEEEETTSCEEEEEGGGTTE--EEEEECCCCSCEEEEEE
T ss_pred EEEEEECCCCc------EEEEEeCCCCcEEEEEEcCCCC-EEEEECCCCeEEEEECCCCcc--hhhhhcccCCcEEEEEE
Confidence 99999998763 4567788999999999999987 567999999999999987642 34567789999999999
Q ss_pred cCCCCeEEEEEeCCCcEEEEECCCCCCcceEecCCCCCEEEEEEcC--CCCcEEEEEECCCeEEEeeCCCCCcccCCCCc
Q 014454 282 NPFNEWILATGSTDKTVKLFDLRKISTALHTFDSHKEEVFQVGWNP--KNETILASCCLGRRLMVWDLSRIDEEQTPEDA 359 (424)
Q Consensus 282 ~~~~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~~h~~~v~~~~~sp--~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~ 359 (424)
+|.+..+|++|+.|++|++||++...........|...+..+.|+| ++ .+|++++.|+.|+|||++..
T Consensus 149 ~p~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-~~l~s~s~D~~i~iWd~~~~--------- 218 (304)
T 2ynn_A 149 NPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDK-PYMITASDDLTIKIWDYQTK--------- 218 (304)
T ss_dssp CTTCTTEEEEEETTSEEEEEETTCSSCSEEEECCCTTCEEEEEECCSTTC-CEEEEEETTSEEEEEETTTT---------
T ss_pred CCCCCCEEEEEeCCCeEEEEECCCCCccceeccCCcCcEEEEEEEEcCCC-CEEEEEcCCCeEEEEeCCCC---------
Confidence 9965558999999999999999884444444456778999999987 44 48999999999999999874
Q ss_pred CCCCCeeeEEEcCCCCCcceEEeCCCCCcEEEEEeCCCcEEEEecCCccC
Q 014454 360 EDGPPELLFIHGGHTSKISDFSWNPCEDWVISSVAEDNILQIWQMAENIY 409 (424)
Q Consensus 360 ~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~ 409 (424)
.++..+.+|...|..++|+|+++ +|++++.||.|++||+.++.+
T Consensus 219 -----~~~~~~~~h~~~v~~~~~~p~~~-~l~s~s~Dg~i~iWd~~~~~~ 262 (304)
T 2ynn_A 219 -----SCVATLEGHMSNVSFAVFHPTLP-IIISGSEDGTLKIWNSSTYKV 262 (304)
T ss_dssp -----EEEEEEECCSSCEEEEEECSSSS-EEEEEETTSCEEEEETTTCCE
T ss_pred -----ccceeeCCCCCCEEEEEECCCCC-EEEEEcCCCeEEEEECCCCce
Confidence 66788899999999999999999 799999999999999988654
No 5
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=1.2e-41 Score=314.53 Aligned_cols=255 Identities=18% Similarity=0.281 Sum_probs=210.6
Q ss_pred EEeccCCceeEEEecCCCCcEEEEEeCCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCceeEEEecCCCCceEEEEeC
Q 014454 120 QQINHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSD 199 (424)
Q Consensus 120 ~~~~h~~~v~~~~~~p~~~~~latg~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~ 199 (424)
....|...|++++|+|++. +++++.||+|+|||+.+.... ........+|...|++++|+|++. +|++|+.
T Consensus 89 ~~~~~~~~V~~~~~s~d~~--~l~~s~dg~v~lWd~~~~~~~------~~~~~~~~~h~~~V~~v~~spdg~-~l~sgs~ 159 (357)
T 4g56_B 89 AGVQTEAGVTDVAWVSEKG--ILVASDSGAVELWEILEKESL------LVNKFAKYEHDDIVKTLSVFSDGT-QAVSGGK 159 (357)
T ss_dssp EEEECSSCEEEEEEETTTE--EEEEETTSCEEEC--------------CCCCEEECCCSSCEEEEEECSSSS-EEEEEET
T ss_pred ccCCCCCCEEEEEEcCCCC--EEEEECCCEEEEeecccccee------EEEeeccCCCCCCEEEEEECCCCC-EEEEEeC
Confidence 3557999999999999874 556788999999999762111 122345668999999999999988 7999999
Q ss_pred CCcEEEEeCCCCCCCCcccceeeeecCCccEeeEEEecCCCcEEEEEeCCCeEEEEEcCCCCCCCCeeeeeccCCCeeEE
Q 014454 200 DAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCL 279 (424)
Q Consensus 200 dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~v 279 (424)
||.|++||++++ ..+..+.+|...|++++|++++..++++++.||.|++||+++++... ......+...++++
T Consensus 160 dg~v~iwd~~~~------~~~~~~~~h~~~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~~~-~~~~~~~~~~v~~v 232 (357)
T 4g56_B 160 DFSVKVWDLSQK------AVLKSYNAHSSEVNCVAACPGKDTIFLSCGEDGRILLWDTRKPKPAT-RIDFCASDTIPTSV 232 (357)
T ss_dssp TSCEEEEETTTT------EEEEEECCCSSCEEEEEECTTCSSCEEEEETTSCEEECCTTSSSCBC-BCCCTTCCSCEEEE
T ss_pred CCeEEEEECCCC------cEEEEEcCCCCCEEEEEEccCCCceeeeeccCCceEEEECCCCceee-eeeeccccccccch
Confidence 999999999876 35667788999999999999988788899999999999999876422 22334567889999
Q ss_pred EecCCCCeEEEEEeCCCcEEEEECCCCCCcceEecCCCCCEEEEEEcCCCCcEEEEEECCCeEEEeeCCCCCcccCCCCc
Q 014454 280 AFNPFNEWILATGSTDKTVKLFDLRKISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPEDA 359 (424)
Q Consensus 280 ~~~~~~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~ 359 (424)
+|+|++..+|++|+.|+.|++||+++ .+++..+.+|...|++++|+|++..+||+|+.|++|+|||++.+
T Consensus 233 ~~sp~~~~~la~g~~d~~i~~wd~~~-~~~~~~~~~~~~~v~~l~~sp~~~~~lasgs~D~~i~iwd~~~~--------- 302 (357)
T 4g56_B 233 TWHPEKDDTFACGDETGNVSLVNIKN-PDSAQTSAVHSQNITGLAYSYHSSPFLASISEDCTVAVLDADFS--------- 302 (357)
T ss_dssp EECTTSTTEEEEEESSSCEEEEESSC-GGGCEEECCCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTSC---------
T ss_pred hhhhcccceEEEeecccceeEEECCC-CcEeEEEeccceeEEEEEEcCCCCCEEEEEeCCCEEEEEECCCC---------
Confidence 99999877899999999999999998 68889999999999999999998778999999999999999864
Q ss_pred CCCCCeeeEEEcCCCCCcceEEeCC-CCCcEEEEEeCCCcEEEEecCCc
Q 014454 360 EDGPPELLFIHGGHTSKISDFSWNP-CEDWVISSVAEDNILQIWQMAEN 407 (424)
Q Consensus 360 ~~~~~~~~~~~~~h~~~v~~~~~~~-~~~~~l~s~~~dg~i~vw~~~~~ 407 (424)
+++ ...+|...|++++|+| ++. +|+|++.||.|++|++...
T Consensus 303 -----~~~-~~~~H~~~V~~vafsP~d~~-~l~s~s~Dg~v~iW~~~~~ 344 (357)
T 4g56_B 303 -----EVF-RDLSHRDFVTGVAWSPLDHS-KFTTVGWDHKVLHHHLPSE 344 (357)
T ss_dssp -----EEE-EECCCSSCEEEEEECSSSTT-EEEEEETTSCEEEEECC--
T ss_pred -----cEe-EECCCCCCEEEEEEeCCCCC-EEEEEcCCCeEEEEECCCC
Confidence 333 3458999999999999 566 7999999999999999664
No 6
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=6.1e-41 Score=315.72 Aligned_cols=246 Identities=20% Similarity=0.363 Sum_probs=217.9
Q ss_pred EeccCCceeEEEecCCCCcEEEEEeCCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCceeEEEecCCCCceEEEEeCC
Q 014454 121 QINHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDD 200 (424)
Q Consensus 121 ~~~h~~~v~~~~~~p~~~~~latg~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~d 200 (424)
..+|.+.|++++|+|++. +||+|+.||+|+|||+.. ......+.+|...|.+++|+|++. +|++|+.|
T Consensus 146 l~~h~~~V~~v~~~~~~~-~l~sgs~D~~i~iwd~~~----------~~~~~~~~~h~~~V~~v~~~p~~~-~l~s~s~D 213 (410)
T 1vyh_C 146 LKGHTDSVQDISFDHSGK-LLASCSADMTIKLWDFQG----------FECIRTMHGHDHNVSSVSIMPNGD-HIVSASRD 213 (410)
T ss_dssp ECCCSSCEEEEEECTTSS-EEEEEETTSCCCEEETTS----------SCEEECCCCCSSCEEEEEECSSSS-EEEEEETT
T ss_pred EeccCCcEEEEEEcCCCC-EEEEEeCCCeEEEEeCCC----------CceeEEEcCCCCCEEEEEEeCCCC-EEEEEeCC
Confidence 347999999999999886 899999999999999976 455667889999999999999887 79999999
Q ss_pred CcEEEEeCCCCCCCCcccceeeeecCCccEeeEEEecCCCcEEEEEeCCCeEEEEEcCCCCCCCCeeeeeccCCCeeEEE
Q 014454 201 AQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLA 280 (424)
Q Consensus 201 g~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~v~ 280 (424)
++|++||++++ ..+..+.+|...|.+++|+|++. ++++|+.|+.|++||++++.. ...+..|...|.+++
T Consensus 214 ~~i~~wd~~~~------~~~~~~~~h~~~v~~~~~~~~g~-~l~s~s~D~~v~vwd~~~~~~---~~~~~~h~~~v~~~~ 283 (410)
T 1vyh_C 214 KTIKMWEVQTG------YCVKTFTGHREWVRMVRPNQDGT-LIASCSNDQTVRVWVVATKEC---KAELREHRHVVECIS 283 (410)
T ss_dssp SEEEEEETTTC------CEEEEEECCSSCEEEEEECTTSS-EEEEEETTSCEEEEETTTCCE---EEEECCCSSCEEEEE
T ss_pred CeEEEEECCCC------cEEEEEeCCCccEEEEEECCCCC-EEEEEcCCCeEEEEECCCCce---eeEecCCCceEEEEE
Confidence 99999999876 34567788999999999999986 667999999999999998654 667788999999999
Q ss_pred ecCCC-------------------CeEEEEEeCCCcEEEEECCCCCCcceEecCCCCCEEEEEEcCCCCcEEEEEECCCe
Q 014454 281 FNPFN-------------------EWILATGSTDKTVKLFDLRKISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRR 341 (424)
Q Consensus 281 ~~~~~-------------------~~~l~tg~~dg~i~iwd~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~l~s~~~dg~ 341 (424)
|+|++ ..+|++|+.|+.|++||+++ +.++..+.+|...|.+++|+|++. +|++|+.||.
T Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~i~iwd~~~-~~~~~~~~~h~~~v~~v~~~~~g~-~l~s~s~D~~ 361 (410)
T 1vyh_C 284 WAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVST-GMCLMTLVGHDNWVRGVLFHSGGK-FILSCADDKT 361 (410)
T ss_dssp ECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEEEETTT-TEEEEEEECCSSCEEEEEECSSSS-CEEEEETTTE
T ss_pred EcCcccccchhhhccccccccCCCCCEEEEEeCCCeEEEEECCC-CceEEEEECCCCcEEEEEEcCCCC-EEEEEeCCCe
Confidence 99963 23799999999999999998 788899999999999999999996 6899999999
Q ss_pred EEEeeCCCCCcccCCCCcCCCCCeeeEEEcCCCCCcceEEeCCCCCcEEEEEeCCCcEEEEecC
Q 014454 342 LMVWDLSRIDEEQTPEDAEDGPPELLFIHGGHTSKISDFSWNPCEDWVISSVAEDNILQIWQMA 405 (424)
Q Consensus 342 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~vw~~~ 405 (424)
|++||+... .++..+.+|...|++++|+|+++ +|++|+.||.|+||++.
T Consensus 362 i~vwd~~~~--------------~~~~~~~~h~~~v~~l~~~~~~~-~l~sgs~D~~i~vW~~r 410 (410)
T 1vyh_C 362 LRVWDYKNK--------------RCMKTLNAHEHFVTSLDFHKTAP-YVVTGSVDQTVKVWECR 410 (410)
T ss_dssp EEEECCTTS--------------CCCEEEECCSSCEEEEEECSSSS-CEEEEETTSEEEEEC--
T ss_pred EEEEECCCC--------------ceEEEEcCCCCcEEEEEEcCCCC-EEEEEeCCCcEEEEeCC
Confidence 999999764 45677789999999999999999 68999999999999863
No 7
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=4.2e-40 Score=302.90 Aligned_cols=307 Identities=19% Similarity=0.342 Sum_probs=235.7
Q ss_pred CccEEEEccCCCCCCCCCCceEEEEEeecCCCCCCCeEEEEEEECCCCCCCcccCCCCCcCCCCCCCCCCCCcEEEEEEe
Q 014454 43 PSLTVEWLPDREEPPGKDYSVQKMILGTHTSENEPNYLMLAQVQLPLDDSENDARHYDDDRSDFGGFGCANGKVQIIQQI 122 (424)
Q Consensus 43 p~~~~~~~p~~~~~~~~~~~~~~~~~gt~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 122 (424)
++..++|.|+. ..++.|. .+..|+++.+.-. ..........
T Consensus 18 ~v~~l~~sp~g----------~~las~~-----~D~~i~iw~~~~~------------------------~~~~~~~~~~ 58 (345)
T 3fm0_A 18 RCWFLAWNPAG----------TLLASCG-----GDRRIRIWGTEGD------------------------SWICKSVLSE 58 (345)
T ss_dssp CEEEEEECTTS----------SCEEEEE-----TTSCEEEEEEETT------------------------EEEEEEEECS
T ss_pred cEEEEEECCCC----------CEEEEEc-----CCCeEEEEEcCCC------------------------cceeeeeecc
Confidence 46788999876 3455554 4567888877311 0001112224
Q ss_pred ccCCceeEEEecCCCCcEEEEEeCCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCceeEEEecCCCCceEEEEeCCCc
Q 014454 123 NHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDDAQ 202 (424)
Q Consensus 123 ~h~~~v~~~~~~p~~~~~latg~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~ 202 (424)
+|.+.|++++|+|++. +||+|+.|+.|+||++.. ........+.+|...|.+++|+|++. +|++|+.|+.
T Consensus 59 ~h~~~v~~~~~sp~g~-~l~s~s~D~~v~iw~~~~--------~~~~~~~~~~~h~~~v~~v~~sp~~~-~l~s~s~D~~ 128 (345)
T 3fm0_A 59 GHQRTVRKVAWSPCGN-YLASASFDATTCIWKKNQ--------DDFECVTTLEGHENEVKSVAWAPSGN-LLATCSRDKS 128 (345)
T ss_dssp SCSSCEEEEEECTTSS-EEEEEETTSCEEEEEECC--------C-EEEEEEECCCSSCEEEEEECTTSS-EEEEEETTSC
T ss_pred ccCCcEEEEEECCCCC-EEEEEECCCcEEEEEccC--------CCeEEEEEccCCCCCceEEEEeCCCC-EEEEEECCCe
Confidence 7999999999999886 899999999999999876 22344667889999999999999887 8999999999
Q ss_pred EEEEeCCCCCCCCcccceeeeecCCccEeeEEEecCCCcEEEEEeCCCeEEEEEcCCCCCCCCeeeeeccCCCeeEEEec
Q 014454 203 ICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFN 282 (424)
Q Consensus 203 i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~v~~~ 282 (424)
|++||++... ....+..+..|...|.+++|+|++. +|++++.|+.|++||++.+.. .....+.+|...|++++|+
T Consensus 129 v~iwd~~~~~---~~~~~~~~~~h~~~v~~~~~~p~~~-~l~s~s~d~~i~~w~~~~~~~-~~~~~~~~h~~~v~~l~~s 203 (345)
T 3fm0_A 129 VWVWEVDEED---EYECVSVLNSHTQDVKHVVWHPSQE-LLASASYDDTVKLYREEEDDW-VCCATLEGHESTVWSLAFD 203 (345)
T ss_dssp EEEEEECTTS---CEEEEEEECCCCSCEEEEEECSSSS-CEEEEETTSCEEEEEEETTEE-EEEEEECCCSSCEEEEEEC
T ss_pred EEEEECCCCC---CeEEEEEecCcCCCeEEEEECCCCC-EEEEEeCCCcEEEEEecCCCE-EEEEEecCCCCceEEEEEC
Confidence 9999997653 2234566778999999999999987 557999999999999987542 2345678899999999999
Q ss_pred CCCCeEEEEEeCCCcEEEEECCCCCC--------------cceEecC-CCCCEEEEEEcCCCCcEEEEEECCCeEEEeeC
Q 014454 283 PFNEWILATGSTDKTVKLFDLRKIST--------------ALHTFDS-HKEEVFQVGWNPKNETILASCCLGRRLMVWDL 347 (424)
Q Consensus 283 ~~~~~~l~tg~~dg~i~iwd~~~~~~--------------~~~~~~~-h~~~v~~~~~sp~~~~~l~s~~~dg~i~iwd~ 347 (424)
|++. +|++|+.|++|++||.+.... ++..+.+ |...|.+++|+|++. +|++++.|+.|++|+.
T Consensus 204 p~g~-~l~s~s~D~~v~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~-~l~s~~~d~~i~vw~~ 281 (345)
T 3fm0_A 204 PSGQ-RLASCSDDRTVRIWRQYLPGNEQGVACSGSDPSWKCICTLSGFHSRTIYDIAWCQLTG-ALATACGDDAIRVFQE 281 (345)
T ss_dssp TTSS-EEEEEETTSCEEEEEEECTTCTTCCCCC---CEEEEEEEECSSCSSCEEEEEECTTTC-CEEEEETTSCEEEEEE
T ss_pred CCCC-EEEEEeCCCeEEEeccccCCCCccceeeccCCccceeEEecCCCCCcEEEEEEecCCC-EEEEEeCCCeEEEEEe
Confidence 9998 699999999999999754221 1233443 888999999999996 6999999999999998
Q ss_pred CCCCcccCCCCcCCCCCeeeEEEcCCCCCcceEEeCCCCCcEEEEEeCCCcEEEEecCCccCC
Q 014454 348 SRIDEEQTPEDAEDGPPELLFIHGGHTSKISDFSWNPCEDWVISSVAEDNILQIWQMAENIYH 410 (424)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~~ 410 (424)
.......... .......+.+|...|++++|+|+++.+|+|++.||.|++|++.++...
T Consensus 282 ~~~~~~~~~~-----~~~~~~~~~~h~~~V~~v~~~p~~~~~laS~s~Dg~v~~W~~~~~~~~ 339 (345)
T 3fm0_A 282 DPNSDPQQPT-----FSLTAHLHQAHSQDVNCVAWNPKEPGLLASCSDDGEVAFWKYQRPEGL 339 (345)
T ss_dssp CTTSCTTSCC-----EEEEEEETTSSSSCEEEEEECSSSTTEEEEEETTSCEEEEEECC----
T ss_pred CCCCCcceee-----EEEEeeecccccCcEeEeEEeCCCceEEEEcCCCCcEEEEEecCCCCc
Confidence 7643221100 001122346899999999999998668999999999999999887543
No 8
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=3.4e-40 Score=310.61 Aligned_cols=249 Identities=22% Similarity=0.371 Sum_probs=223.4
Q ss_pred EeccCCceeEEEecCCCCcEEEEEeCCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCceeEEEecCCCCceEEEEeCC
Q 014454 121 QINHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDD 200 (424)
Q Consensus 121 ~~~h~~~v~~~~~~p~~~~~latg~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~d 200 (424)
..+|.++|++++|+|++. +||+|+.||+|+|||+.+ ......+.+|...|.+++|+|++. +|++|+.|
T Consensus 104 l~gh~~~V~~~~~~p~~~-~l~s~s~Dg~i~vwd~~~----------~~~~~~l~~h~~~V~~v~~~~~~~-~l~sgs~D 171 (410)
T 1vyh_C 104 LSGHRSPVTRVIFHPVFS-VMVSASEDATIKVWDYET----------GDFERTLKGHTDSVQDISFDHSGK-LLASCSAD 171 (410)
T ss_dssp EECCSSCEEEEEECSSSS-EEEEEESSSCEEEEETTT----------CCCCEEECCCSSCEEEEEECTTSS-EEEEEETT
T ss_pred ecccCCcEEEEEEcCCCC-EEEEEeCCCeEEEEECCC----------CcEEEEEeccCCcEEEEEEcCCCC-EEEEEeCC
Confidence 458999999999999886 899999999999999987 455678999999999999999887 89999999
Q ss_pred CcEEEEeCCCCCCCCcccceeeeecCCccEeeEEEecCCCcEEEEEeCCCeEEEEEcCCCCCCCCeeeeeccCCCeeEEE
Q 014454 201 AQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLA 280 (424)
Q Consensus 201 g~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~v~ 280 (424)
|+|++||+.+. ..+..+.+|...|.+++|+|++. .+++|+.|+.|++||++++.. +..+.+|...|.+++
T Consensus 172 ~~i~iwd~~~~------~~~~~~~~h~~~V~~v~~~p~~~-~l~s~s~D~~i~~wd~~~~~~---~~~~~~h~~~v~~~~ 241 (410)
T 1vyh_C 172 MTIKLWDFQGF------ECIRTMHGHDHNVSSVSIMPNGD-HIVSASRDKTIKMWEVQTGYC---VKTFTGHREWVRMVR 241 (410)
T ss_dssp SCCCEEETTSS------CEEECCCCCSSCEEEEEECSSSS-EEEEEETTSEEEEEETTTCCE---EEEEECCSSCEEEEE
T ss_pred CeEEEEeCCCC------ceeEEEcCCCCCEEEEEEeCCCC-EEEEEeCCCeEEEEECCCCcE---EEEEeCCCccEEEEE
Confidence 99999999765 34666788999999999999986 556999999999999998764 778889999999999
Q ss_pred ecCCCCeEEEEEeCCCcEEEEECCCCCCcceEecCCCCCEEEEEEcCCC-------------------CcEEEEEECCCe
Q 014454 281 FNPFNEWILATGSTDKTVKLFDLRKISTALHTFDSHKEEVFQVGWNPKN-------------------ETILASCCLGRR 341 (424)
Q Consensus 281 ~~~~~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~~h~~~v~~~~~sp~~-------------------~~~l~s~~~dg~ 341 (424)
|+|++. +|++|+.|++|++||+++ ..+...+..|...|.+++|+|++ ..+|++|+.|+.
T Consensus 242 ~~~~g~-~l~s~s~D~~v~vwd~~~-~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~ 319 (410)
T 1vyh_C 242 PNQDGT-LIASCSNDQTVRVWVVAT-KECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKT 319 (410)
T ss_dssp ECTTSS-EEEEEETTSCEEEEETTT-CCEEEEECCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSE
T ss_pred ECCCCC-EEEEEcCCCeEEEEECCC-CceeeEecCCCceEEEEEEcCcccccchhhhccccccccCCCCCEEEEEeCCCe
Confidence 999988 799999999999999998 67888899999999999999963 247999999999
Q ss_pred EEEeeCCCCCcccCCCCcCCCCCeeeEEEcCCCCCcceEEeCCCCCcEEEEEeCCCcEEEEecCCcc
Q 014454 342 LMVWDLSRIDEEQTPEDAEDGPPELLFIHGGHTSKISDFSWNPCEDWVISSVAEDNILQIWQMAENI 408 (424)
Q Consensus 342 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~ 408 (424)
|++||++.+ .++..+.+|...|++++|+|+++ +|++++.||.|++||+.++.
T Consensus 320 i~iwd~~~~--------------~~~~~~~~h~~~v~~v~~~~~g~-~l~s~s~D~~i~vwd~~~~~ 371 (410)
T 1vyh_C 320 IKMWDVSTG--------------MCLMTLVGHDNWVRGVLFHSGGK-FILSCADDKTLRVWDYKNKR 371 (410)
T ss_dssp EEEEETTTT--------------EEEEEEECCSSCEEEEEECSSSS-CEEEEETTTEEEEECCTTSC
T ss_pred EEEEECCCC--------------ceEEEEECCCCcEEEEEEcCCCC-EEEEEeCCCeEEEEECCCCc
Confidence 999999874 66778889999999999999999 58899999999999997764
No 9
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=3.9e-40 Score=299.82 Aligned_cols=253 Identities=17% Similarity=0.284 Sum_probs=219.6
Q ss_pred EEEeccCCceeEEEecCCC---CcEEEEEeCCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCceeEEEecCCCCceEE
Q 014454 119 IQQINHDGEVNRARYMPQN---PFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLL 195 (424)
Q Consensus 119 ~~~~~h~~~v~~~~~~p~~---~~~latg~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~ 195 (424)
....+|.+.|++++|+|++ ..+||+|+.|++|+||++.. ........+.+|...|.+++|++++. +++
T Consensus 26 ~~~~~H~~~V~~v~~~~~~~~~~~~l~tgs~D~~v~vW~~~~--------~~~~~~~~l~gh~~~v~~~~~~~~~~-~l~ 96 (321)
T 3ow8_A 26 KQEQAHDDAIWSVAWGTNKKENSETVVTGSLDDLVKVWKWRD--------ERLDLQWSLEGHQLGVVSVDISHTLP-IAA 96 (321)
T ss_dssp EETTSSSSCEEEEEEC-------CEEEEEETTSCEEEEEEET--------TEEEEEEEECCCSSCEEEEEECSSSS-EEE
T ss_pred eecccCCCcEEEEEEecCCCCCCCEEEEEcCCCCEEEEECCC--------CCeeeeeeeccCCCCEEEEEECCCCC-EEE
Confidence 3345799999999999852 34899999999999999876 22233456889999999999999887 799
Q ss_pred EEeCCCcEEEEeCCCCCCCCcccceeeeecCCccEeeEEEecCCCcEEEEEeCCCeEEEEEcCCCCCCCCeeeeeccCCC
Q 014454 196 SGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSE 275 (424)
Q Consensus 196 s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~ 275 (424)
+++.|++|++||+.++ ..+..+..|...+.+++|+|++. .|++++.||.|++||++++.. ...+..|...
T Consensus 97 s~s~D~~i~lWd~~~~------~~~~~~~~~~~~~~~~~~spdg~-~l~~g~~dg~v~i~~~~~~~~---~~~~~~~~~~ 166 (321)
T 3ow8_A 97 SSSLDAHIRLWDLENG------KQIKSIDAGPVDAWTLAFSPDSQ-YLATGTHVGKVNIFGVESGKK---EYSLDTRGKF 166 (321)
T ss_dssp EEETTSEEEEEETTTT------EEEEEEECCTTCCCCEEECTTSS-EEEEECTTSEEEEEETTTCSE---EEEEECSSSC
T ss_pred EEeCCCcEEEEECCCC------CEEEEEeCCCccEEEEEECCCCC-EEEEEcCCCcEEEEEcCCCce---eEEecCCCce
Confidence 9999999999999876 34566677888999999999987 567999999999999998663 6667788899
Q ss_pred eeEEEecCCCCeEEEEEeCCCcEEEEECCCCCCcceEecCCCCCEEEEEEcCCCCcEEEEEECCCeEEEeeCCCCCcccC
Q 014454 276 VNCLAFNPFNEWILATGSTDKTVKLFDLRKISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQT 355 (424)
Q Consensus 276 v~~v~~~~~~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~l~s~~~dg~i~iwd~~~~~~~~~ 355 (424)
|.+++|+|++. +|++|+.||.|++||+++ ++++..+.+|..+|.+++|+|++. +|++++.|+.|+|||++..
T Consensus 167 v~~~~~spdg~-~lasg~~dg~i~iwd~~~-~~~~~~~~~h~~~v~~l~~spd~~-~l~s~s~dg~i~iwd~~~~----- 238 (321)
T 3ow8_A 167 ILSIAYSPDGK-YLASGAIDGIINIFDIAT-GKLLHTLEGHAMPIRSLTFSPDSQ-LLVTASDDGYIKIYDVQHA----- 238 (321)
T ss_dssp EEEEEECTTSS-EEEEEETTSCEEEEETTT-TEEEEEECCCSSCCCEEEECTTSC-EEEEECTTSCEEEEETTTC-----
T ss_pred EEEEEECCCCC-EEEEEcCCCeEEEEECCC-CcEEEEEcccCCceeEEEEcCCCC-EEEEEcCCCeEEEEECCCc-----
Confidence 99999999998 699999999999999998 788899999999999999999996 7999999999999999864
Q ss_pred CCCcCCCCCeeeEEEcCCCCCcceEEeCCCCCcEEEEEeCCCcEEEEecCCcc
Q 014454 356 PEDAEDGPPELLFIHGGHTSKISDFSWNPCEDWVISSVAEDNILQIWQMAENI 408 (424)
Q Consensus 356 ~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~ 408 (424)
.+...+.+|...|.+++|+|+++ +|++++.|+.|+|||+.++.
T Consensus 239 ---------~~~~~~~~h~~~v~~~~~sp~~~-~l~s~s~D~~v~iwd~~~~~ 281 (321)
T 3ow8_A 239 ---------NLAGTLSGHASWVLNVAFCPDDT-HFVSSSSDKSVKVWDVGTRT 281 (321)
T ss_dssp ---------CEEEEECCCSSCEEEEEECTTSS-EEEEEETTSCEEEEETTTTE
T ss_pred ---------ceeEEEcCCCCceEEEEECCCCC-EEEEEeCCCcEEEEeCCCCE
Confidence 55677889999999999999999 69999999999999998764
No 10
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=7.6e-39 Score=293.91 Aligned_cols=246 Identities=23% Similarity=0.348 Sum_probs=211.3
Q ss_pred EeccCCceeEEEecCCCCcEEEEEeCCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCceeEEEecCCCCceEEEEeCC
Q 014454 121 QINHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDD 200 (424)
Q Consensus 121 ~~~h~~~v~~~~~~p~~~~~latg~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~d 200 (424)
...|...|.+++|+|++. +||+|+.|+.|++|++.... ........+.+|...|.++.|++++ .+++++.|
T Consensus 93 ~~~~~~~v~~~~~s~~~~-~l~s~~~d~~v~iw~~~~~~------~~~~~~~~~~~h~~~v~~~~~~~~~--~l~s~s~d 163 (340)
T 1got_B 93 IPLRSSWVMTCAYAPSGN-YVACGGLDNICSIYNLKTRE------GNVRVSRELAGHTGYLSCCRFLDDN--QIVTSSGD 163 (340)
T ss_dssp EECSSSCEEEEEECTTSS-EEEEEETTCEEEEEETTTCS------BSCEEEEEEECCSSCEEEEEEEETT--EEEEEETT
T ss_pred eecCCccEEEEEECCCCC-EEEEEeCCCeEEEEECccCC------CcceeEEEecCCCccEEEEEECCCC--cEEEEECC
Confidence 346889999999999886 89999999999999997621 1123445678999999999999865 49999999
Q ss_pred CcEEEEeCCCCCCCCcccceeeeecCCccEeeEEEecCCCcEEEEEeCCCeEEEEEcCCCCCCCCeeeeeccCCCeeEEE
Q 014454 201 AQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLA 280 (424)
Q Consensus 201 g~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~v~ 280 (424)
+.|++||++++ ..+..+.+|...|.+++|+|++. ++++|+.||.|++||++++.. +..+.+|...|++++
T Consensus 164 ~~i~~wd~~~~------~~~~~~~~h~~~v~~~~~~~~~~-~l~sg~~d~~v~~wd~~~~~~---~~~~~~h~~~v~~v~ 233 (340)
T 1got_B 164 TTCALWDIETG------QQTTTFTGHTGDVMSLSLAPDTR-LFVSGACDASAKLWDVREGMC---RQTFTGHESDINAIC 233 (340)
T ss_dssp SCEEEEETTTT------EEEEEECCCSSCEEEEEECTTSS-EEEEEETTSCEEEEETTTCSE---EEEECCCSSCEEEEE
T ss_pred CcEEEEECCCC------cEEEEEcCCCCceEEEEECCCCC-EEEEEeCCCcEEEEECCCCee---EEEEcCCcCCEEEEE
Confidence 99999999876 34566788999999999999886 667999999999999998653 677889999999999
Q ss_pred ecCCCCeEEEEEeCCCcEEEEECCCCCCcceEecC--CCCCEEEEEEcCCCCcEEEEEECCCeEEEeeCCCCCcccCCCC
Q 014454 281 FNPFNEWILATGSTDKTVKLFDLRKISTALHTFDS--HKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPED 358 (424)
Q Consensus 281 ~~~~~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~~--h~~~v~~~~~sp~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~ 358 (424)
|+|++. +|++|+.||+|++||++. ...+..+.. +...|++++|+|++. +|++|+.||.|++||+...
T Consensus 234 ~~p~~~-~l~s~s~d~~v~iwd~~~-~~~~~~~~~~~~~~~v~~~~~s~~g~-~l~~g~~d~~i~vwd~~~~-------- 302 (340)
T 1got_B 234 FFPNGN-AFATGSDDATCRLFDLRA-DQELMTYSHDNIICGITSVSFSKSGR-LLLAGYDDFNCNVWDALKA-------- 302 (340)
T ss_dssp ECTTSS-EEEEEETTSCEEEEETTT-TEEEEEECCTTCCSCEEEEEECTTSS-EEEEEETTSEEEEEETTTC--------
T ss_pred EcCCCC-EEEEEcCCCcEEEEECCC-CcEEEEEccCCcccceEEEEECCCCC-EEEEECCCCeEEEEEcccC--------
Confidence 999987 699999999999999997 555555542 335799999999996 8999999999999999764
Q ss_pred cCCCCCeeeEEEcCCCCCcceEEeCCCCCcEEEEEeCCCcEEEEe
Q 014454 359 AEDGPPELLFIHGGHTSKISDFSWNPCEDWVISSVAEDNILQIWQ 403 (424)
Q Consensus 359 ~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~vw~ 403 (424)
..+..+.+|...|.+++|+|++. +|+|++.|+.|+||+
T Consensus 303 ------~~~~~~~~h~~~v~~~~~s~dg~-~l~s~s~D~~i~iWd 340 (340)
T 1got_B 303 ------DRAGVLAGHDNRVSCLGVTDDGM-AVATGSWDSFLKIWN 340 (340)
T ss_dssp ------CEEEEEECCSSCEEEEEECTTSS-CEEEEETTSCEEEEC
T ss_pred ------cEeeEeecCCCcEEEEEEcCCCC-EEEEEcCCccEEecC
Confidence 45677889999999999999999 699999999999996
No 11
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=100.00 E-value=3e-39 Score=290.84 Aligned_cols=259 Identities=18% Similarity=0.281 Sum_probs=211.4
Q ss_pred EeccCCceeEEEecCCCCcEEEEEeCCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCceeEEEecCC--CCceEEEEe
Q 014454 121 QINHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKF--KEGHLLSGS 198 (424)
Q Consensus 121 ~~~h~~~v~~~~~~p~~~~~latg~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~--~~~~l~s~~ 198 (424)
..+|.+.|++++|+|+++ +||+|+.|++|+||++.. ........+.+|...|.+++|++. +. +|++|+
T Consensus 5 ~~~h~~~V~~~~~s~~g~-~las~s~D~~v~iw~~~~--------~~~~~~~~l~gH~~~V~~v~~s~~~~g~-~l~s~s 74 (297)
T 2pm7_B 5 ANAHNEMIHDAVMDYYGK-RMATCSSDKTIKIFEVEG--------ETHKLIDTLTGHEGPVWRVDWAHPKFGT-ILASCS 74 (297)
T ss_dssp CCSCSSCEEEEEECTTSS-EEEEEETTSCEEEEEBCS--------SCBCCCEEECCCSSCEEEEEECCGGGCS-EEEEEE
T ss_pred ccCCcCceEEEEECCCCC-EEEEEeCCCEEEEEecCC--------CCcEEEEEEccccCCeEEEEecCCCcCC-EEEEEc
Confidence 447999999999999987 899999999999999975 223557789999999999999864 44 899999
Q ss_pred CCCcEEEEeCCCCCCCCcccceeeeecCCccEeeEEEecCC-CcEEEEEeCCCeEEEEEcCCCCCCCCeeeeeccCCCee
Q 014454 199 DDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRH-EYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVN 277 (424)
Q Consensus 199 ~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~~~~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~ 277 (424)
.||+|++||++++.. ..+..+..|...|.+++|+|+. ..+|++++.|+.|++||++..... ....+.+|...|+
T Consensus 75 ~D~~v~iWd~~~~~~----~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~-~~~~~~~h~~~v~ 149 (297)
T 2pm7_B 75 YDGKVMIWKEENGRW----SQIAVHAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTT-SPIIIDAHAIGVN 149 (297)
T ss_dssp TTTEEEEEEBSSSCB----CCCEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCB-CCEEEECCSSCEE
T ss_pred CCCEEEEEEcCCCce----EEEEEeecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCce-eeeeeecccCccc
Confidence 999999999986531 2344566799999999999972 346789999999999999876422 2355678999999
Q ss_pred EEEecCCC------------CeEEEEEeCCCcEEEEECCCCCC---cceEecCCCCCEEEEEEcCCC--CcEEEEEECCC
Q 014454 278 CLAFNPFN------------EWILATGSTDKTVKLFDLRKIST---ALHTFDSHKEEVFQVGWNPKN--ETILASCCLGR 340 (424)
Q Consensus 278 ~v~~~~~~------------~~~l~tg~~dg~i~iwd~~~~~~---~~~~~~~h~~~v~~~~~sp~~--~~~l~s~~~dg 340 (424)
+++|+|++ ..+|++|+.|++|++||++.... ....+.+|...|.+++|+|++ ..+|++++.|+
T Consensus 150 ~~~~~p~~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v~~sp~~~~~~~las~s~D~ 229 (297)
T 2pm7_B 150 SASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYMASVSQDR 229 (297)
T ss_dssp EEEECCCC------------CCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTS
T ss_pred eEeecCCcccccccCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEecCCCCceEEEEECCCCCCceEEEEEECCC
Confidence 99999973 23799999999999999987332 456788999999999999985 45899999999
Q ss_pred eEEEeeCCCCCcccCCCCcCCCCCeeeEEE--cCCCCCcceEEeCCCCCcEEEEEeCCCcEEEEecCC
Q 014454 341 RLMVWDLSRIDEEQTPEDAEDGPPELLFIH--GGHTSKISDFSWNPCEDWVISSVAEDNILQIWQMAE 406 (424)
Q Consensus 341 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~--~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~vw~~~~ 406 (424)
+|+|||++..... .....+ .+|...|.+++|+|+++ +|++++.|+.|+||+...
T Consensus 230 ~v~iWd~~~~~~~-----------~~~~~~~~~~~~~~v~~~~~s~~g~-~las~~~D~~v~lw~~~~ 285 (297)
T 2pm7_B 230 TCIIWTQDNEQGP-----------WKKTLLKEEKFPDVLWRASWSLSGN-VLALSGGDNKVTLWKENL 285 (297)
T ss_dssp CEEEEEESSTTSC-----------CEEEESSSSCCSSCEEEEEECSSSC-CEEEEETTSCEEEEEECT
T ss_pred cEEEEEeCCCCCc-----------cceeeeecccCCCcEEEEEECCCCC-EEEEEcCCCcEEEEEECC
Confidence 9999998763210 011122 46778899999999999 689999999999999863
No 12
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=1.5e-38 Score=287.28 Aligned_cols=285 Identities=18% Similarity=0.245 Sum_probs=232.4
Q ss_pred CccEEEEccCCCCCCCCCCceEEEEEeecCCCCCCCeEEEEEEECCCCCCCcccCCCCCcCCCCCCCCCCCCcEEEEEEe
Q 014454 43 PSLTVEWLPDREEPPGKDYSVQKMILGTHTSENEPNYLMLAQVQLPLDDSENDARHYDDDRSDFGGFGCANGKVQIIQQI 122 (424)
Q Consensus 43 p~~~~~~~p~~~~~~~~~~~~~~~~~gt~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 122 (424)
+..+++|.|+. ..++.|. .+..++++.+. . ...+....
T Consensus 15 ~V~~~~fsp~~----------~~l~s~~-----~dg~v~lWd~~--------------------------~-~~~~~~~~ 52 (304)
T 2ynn_A 15 RVKGIDFHPTE----------PWVLTTL-----YSGRVELWNYE--------------------------T-QVEVRSIQ 52 (304)
T ss_dssp CEEEEEECSSS----------SEEEEEE-----TTSEEEEEETT--------------------------T-TEEEEEEE
T ss_pred ceEEEEECCCC----------CEEEEEc-----CCCcEEEEECC--------------------------C-CceeEEee
Confidence 35688898876 3555555 44577877541 0 11223344
Q ss_pred ccCCceeEEEecCCCCcEEEEEeCCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCceeEEEecCCCCceEEEEeCCCc
Q 014454 123 NHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDDAQ 202 (424)
Q Consensus 123 ~h~~~v~~~~~~p~~~~~latg~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~ 202 (424)
.|..+|.+++|+|++. +|++|+.|+.|++||+.+ ......+.+|...|.+++|+|++. +|++|+.||+
T Consensus 53 ~~~~~v~~~~~~~~~~-~l~s~s~d~~i~vwd~~~----------~~~~~~~~~h~~~v~~~~~~~~~~-~l~sgs~D~~ 120 (304)
T 2ynn_A 53 VTETPVRAGKFIARKN-WIIVGSDDFRIRVFNYNT----------GEKVVDFEAHPDYIRSIAVHPTKP-YVLSGSDDLT 120 (304)
T ss_dssp CCSSCEEEEEEEGGGT-EEEEEETTSEEEEEETTT----------CCEEEEEECCSSCEEEEEECSSSS-EEEEEETTSC
T ss_pred ccCCcEEEEEEeCCCC-EEEEECCCCEEEEEECCC----------CcEEEEEeCCCCcEEEEEEcCCCC-EEEEECCCCe
Confidence 6889999999999886 899999999999999987 456778999999999999999887 7999999999
Q ss_pred EEEEeCCCCCCCCcccceeeeecCCccEeeEEEecCCCcEEEEEeCCCeEEEEEcCCCCCCCCeeeeeccCCCeeEEEec
Q 014454 203 ICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFN 282 (424)
Q Consensus 203 i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~v~~~ 282 (424)
|++||++++. .....+.+|...|.+++|+|.+..+|++|+.|+.|++||++.... .......|...+..++|+
T Consensus 121 v~lWd~~~~~-----~~~~~~~~h~~~v~~v~~~p~~~~~l~sgs~D~~v~iwd~~~~~~--~~~~~~~~~~~v~~~~~~ 193 (304)
T 2ynn_A 121 VKLWNWENNW-----ALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTP--NFTLTTGQERGVNYVDYY 193 (304)
T ss_dssp EEEEEGGGTT-----EEEEEECCCCSCEEEEEECTTCTTEEEEEETTSEEEEEETTCSSC--SEEEECCCTTCEEEEEEC
T ss_pred EEEEECCCCc-----chhhhhcccCCcEEEEEECCCCCCEEEEEeCCCeEEEEECCCCCc--cceeccCCcCcEEEEEEE
Confidence 9999997642 234567789999999999997667888999999999999987653 223334566889999998
Q ss_pred C--CCCeEEEEEeCCCcEEEEECCCCCCcceEecCCCCCEEEEEEcCCCCcEEEEEECCCeEEEeeCCCCCcccCCCCcC
Q 014454 283 P--FNEWILATGSTDKTVKLFDLRKISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPEDAE 360 (424)
Q Consensus 283 ~--~~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~ 360 (424)
| ++. +|++|+.|++|++||+++ +.++..+.+|...|.+++|+|+++ +|++|+.||.|+|||+++.
T Consensus 194 ~~~~~~-~l~s~s~D~~i~iWd~~~-~~~~~~~~~h~~~v~~~~~~p~~~-~l~s~s~Dg~i~iWd~~~~---------- 260 (304)
T 2ynn_A 194 PLPDKP-YMITASDDLTIKIWDYQT-KSCVATLEGHMSNVSFAVFHPTLP-IIISGSEDGTLKIWNSSTY---------- 260 (304)
T ss_dssp CSTTCC-EEEEEETTSEEEEEETTT-TEEEEEEECCSSCEEEEEECSSSS-EEEEEETTSCEEEEETTTC----------
T ss_pred EcCCCC-EEEEEcCCCeEEEEeCCC-CccceeeCCCCCCEEEEEECCCCC-EEEEEcCCCeEEEEECCCC----------
Confidence 7 444 799999999999999998 788999999999999999999996 8999999999999999875
Q ss_pred CCCCeeeEEEcCCCCCcceEEeCCCCCc-EEEEEeCCCcEEEEecCC
Q 014454 361 DGPPELLFIHGGHTSKISDFSWNPCEDW-VISSVAEDNILQIWQMAE 406 (424)
Q Consensus 361 ~~~~~~~~~~~~h~~~v~~~~~~~~~~~-~l~s~~~dg~i~vw~~~~ 406 (424)
+++..+..|...+++++|+|++.. ++++|+.| .+.+|++..
T Consensus 261 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~asg~~~-g~~~~~~~~ 302 (304)
T 2ynn_A 261 ----KVEKTLNVGLERSWCIATHPTGRKNYIASGFDN-GFTVLSLGN 302 (304)
T ss_dssp ----CEEEEECCSSSSEEEEEECTTCGGGCEEEEETT-EEEEEECC-
T ss_pred ----ceeeeccCCCccEEEEEECCCCCceEEEEecCC-ceEEEEecc
Confidence 567778889899999999998854 37776655 588888765
No 13
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=4.4e-39 Score=300.09 Aligned_cols=263 Identities=22% Similarity=0.348 Sum_probs=214.7
Q ss_pred EEeccCCceeEEEecCCCCcEEEEEeCCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCceeEEEecCCCCceEEEEeC
Q 014454 120 QQINHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSD 199 (424)
Q Consensus 120 ~~~~h~~~v~~~~~~p~~~~~latg~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~ 199 (424)
....|...|.+++|+|++. +||+|+.|+.|+||++....... ........+.+|.+.|.++.|+|++...|++|+.
T Consensus 103 ~~~~h~~~v~~~~~s~~g~-~las~~~d~~v~iw~~~~~~~~~---~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~ 178 (380)
T 3iz6_a 103 AIKLHCPWVMECAFAPNGQ-SVACGGLDSACSIFNLSSQADRD---GNMPVSRVLTGHKGYASSCQYVPDQETRLITGSG 178 (380)
T ss_dssp EEECCCTTCCCCEECTTSS-EEEECCSSSCCEEEECCCCSSCC---CSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECT
T ss_pred EEecCCCCEEEEEECCCCC-EEEEeeCCCcEEEEECCCCcccc---CCccceeeccCCCcceEEEEEecCCCCEEEEECC
Confidence 3447999999999999986 89999999999999997632211 1233445678999999999999987767999999
Q ss_pred CCcEEEEeCCCCCCCCcccceeeeecCCccEeeEEEecCCCcEEEEEeCCCeEEEEEcCCCCCCCCeeeeeccCCCeeEE
Q 014454 200 DAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCL 279 (424)
Q Consensus 200 dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~v 279 (424)
|++|++||+.++.....+. .....+|...|.+++|++.+..+|++|+.||.|++||++... ..+..+.+|...|+++
T Consensus 179 D~~i~~wd~~~~~~~~~~~-~~~~~~h~~~v~~~~~~~~~~~~l~sgs~D~~v~~wd~~~~~--~~~~~~~~h~~~v~~v 255 (380)
T 3iz6_a 179 DQTCVLWDVTTGQRISIFG-SEFPSGHTADVLSLSINSLNANMFISGSCDTTVRLWDLRITS--RAVRTYHGHEGDINSV 255 (380)
T ss_dssp TSCEEEECTTTCCEEEEEC-CCSSSSCCSCEEEEEECSSSCCEEEEEETTSCEEEEETTTTC--CCCEEECCCSSCCCEE
T ss_pred CCcEEEEEcCCCcEEEEee-cccCCCCccCeEEEEeecCCCCEEEEEECCCeEEEEECCCCC--cceEEECCcCCCeEEE
Confidence 9999999998774321110 011256889999999998666788899999999999998543 2467788999999999
Q ss_pred EecCCCCeEEEEEeCCCcEEEEECCCCCCcceEecCCC-------CCEEEEEEcCCCCcEEEEEECCCeEEEeeCCCCCc
Q 014454 280 AFNPFNEWILATGSTDKTVKLFDLRKISTALHTFDSHK-------EEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDE 352 (424)
Q Consensus 280 ~~~~~~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~~h~-------~~v~~~~~sp~~~~~l~s~~~dg~i~iwd~~~~~~ 352 (424)
+|+|++. +|++|+.||+|++||+++ +.++..+..+. ..|++++|+|++. +|++|+.||.|++||+...
T Consensus 256 ~~~p~~~-~l~s~s~D~~i~lwd~~~-~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~-~l~~g~~dg~i~vwd~~~~-- 330 (380)
T 3iz6_a 256 KFFPDGQ-RFGTGSDDGTCRLFDMRT-GHQLQVYNREPDRNDNELPIVTSVAFSISGR-LLFAGYSNGDCYVWDTLLA-- 330 (380)
T ss_dssp EECTTSS-EEEEECSSSCEEEEETTT-TEEEEEECCCCSSSCCSSCSCSEEEECSSSS-EEEEECTTSCEEEEETTTC--
T ss_pred EEecCCC-eEEEEcCCCeEEEEECCC-CcEEEEecccccccccccCceEEEEECCCCC-EEEEEECCCCEEEEECCCC--
Confidence 9999998 699999999999999998 66666665433 3489999999996 7999999999999998764
Q ss_pred ccCCCCcCCCCCeeeEEE----cCCCCCcceEEeCCCCCcEEEEEeCCCcEEEEecCCc
Q 014454 353 EQTPEDAEDGPPELLFIH----GGHTSKISDFSWNPCEDWVISSVAEDNILQIWQMAEN 407 (424)
Q Consensus 353 ~~~~~~~~~~~~~~~~~~----~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~ 407 (424)
+.+..+ .+|...|++++|+|++. +|++|+.|+.|+||++...
T Consensus 331 ------------~~~~~~~~~~~~h~~~v~~l~~s~dg~-~l~sgs~D~~i~iW~~~~~ 376 (380)
T 3iz6_a 331 ------------EMVLNLGTLQNSHEGRISCLGLSSDGS-ALCTGSWDKNLKIWAFSGH 376 (380)
T ss_dssp ------------CEEEEECCSCSSCCCCCCEEEECSSSS-EEEEECTTSCEEEEECCSS
T ss_pred ------------ceEEEEecccCCCCCceEEEEECCCCC-EEEEeeCCCCEEEEecCCC
Confidence 233333 68999999999999999 7999999999999999765
No 14
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=5e-38 Score=289.96 Aligned_cols=249 Identities=22% Similarity=0.336 Sum_probs=212.7
Q ss_pred eccCCceeEEEecCCCCcEEEEEeCCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCceeEEEecCCCCceEEEEeCCC
Q 014454 122 INHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDDA 201 (424)
Q Consensus 122 ~~h~~~v~~~~~~p~~~~~latg~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg 201 (424)
..|...|.+++|+|++. ++|+|+.|+.+++|++....... .......+.+|...|.+++|+|++. .|++++.||
T Consensus 103 ~~~~~~v~~~~~sp~g~-~lasg~~d~~i~v~~~~~~~~~~----~~~~~~~~~~h~~~v~~~~~~~~~~-~l~t~s~D~ 176 (354)
T 2pbi_B 103 TMPCTWVMACAYAPSGC-AIACGGLDNKCSVYPLTFDKNEN----MAAKKKSVAMHTNYLSACSFTNSDM-QILTASGDG 176 (354)
T ss_dssp ECSSSCCCEEEECTTSS-EEEEESTTSEEEEEECCCCTTCC----SGGGCEEEEECSSCEEEEEECSSSS-EEEEEETTS
T ss_pred ecCCCCEEEEEECCCCC-EEEEeeCCCCEEEEEEecccccc----ccccceeeeccCCcEEEEEEeCCCC-EEEEEeCCC
Confidence 45788999999999986 89999999999999987532211 1234567888999999999999887 799999999
Q ss_pred cEEEEeCCCCCCCCcccceeeeecCCccEeeEEEecCC-CcEEEEEeCCCeEEEEEcCCCCCCCCeeeeeccCCCeeEEE
Q 014454 202 QICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRH-EYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLA 280 (424)
Q Consensus 202 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~~~~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~v~ 280 (424)
+|++||++++ ..+..+.+|...|.+++|+|.. ..+|++|+.||.|++||++++.. +..+..|...|++++
T Consensus 177 ~v~lwd~~~~------~~~~~~~~h~~~v~~~~~~~~~~g~~l~sgs~Dg~v~~wd~~~~~~---~~~~~~h~~~v~~v~ 247 (354)
T 2pbi_B 177 TCALWDVESG------QLLQSFHGHGADVLCLDLAPSETGNTFVSGGCDKKAMVWDMRSGQC---VQAFETHESDVNSVR 247 (354)
T ss_dssp EEEEEETTTC------CEEEEEECCSSCEEEEEECCCSSCCEEEEEETTSCEEEEETTTCCE---EEEECCCSSCEEEEE
T ss_pred cEEEEeCCCC------eEEEEEcCCCCCeEEEEEEeCCCCCEEEEEeCCCeEEEEECCCCcE---EEEecCCCCCeEEEE
Confidence 9999999876 3466788899999999998853 35778999999999999998664 777888999999999
Q ss_pred ecCCCCeEEEEEeCCCcEEEEECCCCCCcceEecCC--CCCEEEEEEcCCCCcEEEEEECCCeEEEeeCCCCCcccCCCC
Q 014454 281 FNPFNEWILATGSTDKTVKLFDLRKISTALHTFDSH--KEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPED 358 (424)
Q Consensus 281 ~~~~~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~~h--~~~v~~~~~sp~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~ 358 (424)
|+|++. +|++|+.|++|++||++. ...+..+..+ ...+.+++|+|++. +|++++.|+.|+|||+..+
T Consensus 248 ~~p~~~-~l~s~s~D~~v~lwd~~~-~~~~~~~~~~~~~~~~~~~~~s~~g~-~l~~g~~d~~i~vwd~~~~-------- 316 (354)
T 2pbi_B 248 YYPSGD-AFASGSDDATCRLYDLRA-DREVAIYSKESIIFGASSVDFSLSGR-LLFAGYNDYTINVWDVLKG-------- 316 (354)
T ss_dssp ECTTSS-EEEEEETTSCEEEEETTT-TEEEEEECCTTCCSCEEEEEECTTSS-EEEEEETTSCEEEEETTTC--------
T ss_pred EeCCCC-EEEEEeCCCeEEEEECCC-CcEEEEEcCCCcccceeEEEEeCCCC-EEEEEECCCcEEEEECCCC--------
Confidence 999987 699999999999999997 4555555433 35789999999996 8999999999999999764
Q ss_pred cCCCCCeeeEEEcCCCCCcceEEeCCCCCcEEEEEeCCCcEEEEe
Q 014454 359 AEDGPPELLFIHGGHTSKISDFSWNPCEDWVISSVAEDNILQIWQ 403 (424)
Q Consensus 359 ~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~vw~ 403 (424)
..+..+.+|...|++++|+|+++ +|++++.|+.|+||+
T Consensus 317 ------~~~~~l~~h~~~v~~l~~spdg~-~l~sgs~D~~v~vW~ 354 (354)
T 2pbi_B 317 ------SRVSILFGHENRVSTLRVSPDGT-AFCSGSWDHTLRVWA 354 (354)
T ss_dssp ------SEEEEECCCSSCEEEEEECTTSS-CEEEEETTSEEEEEC
T ss_pred ------ceEEEEECCCCcEEEEEECCCCC-EEEEEcCCCCEEecC
Confidence 45667889999999999999999 699999999999996
No 15
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=1.4e-38 Score=292.07 Aligned_cols=251 Identities=14% Similarity=0.237 Sum_probs=217.3
Q ss_pred EeccCCceeEEEecCCCCcEEEEEeCCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCceeEEEecCCCCceEEEEeCC
Q 014454 121 QINHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDD 200 (424)
Q Consensus 121 ~~~h~~~v~~~~~~p~~~~~latg~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~d 200 (424)
..+|.+.|++++|+|++. +|++|+.||+|+|||+.+ ......+..|...|.+++|+|++. +|++|+.|
T Consensus 51 l~gH~~~v~~~~~s~d~~-~l~s~s~Dg~v~iWd~~~----------~~~~~~~~~~~~~v~~~~~s~~~~-~l~s~~~d 118 (340)
T 1got_B 51 LRGHLAKIYAMHWGTDSR-LLLSASQDGKLIIWDSYT----------TNKVHAIPLRSSWVMTCAYAPSGN-YVACGGLD 118 (340)
T ss_dssp ECCCSSCEEEEEECTTSS-EEEEEETTTEEEEEETTT----------CCEEEEEECSSSCEEEEEECTTSS-EEEEEETT
T ss_pred ecCCCCceEEEEECCCCC-EEEEEeCCCcEEEEECCC----------CCcceEeecCCccEEEEEECCCCC-EEEEEeCC
Confidence 457999999999999886 899999999999999877 455677889999999999999887 89999999
Q ss_pred CcEEEEeCCCCCCCCcccceeeeecCCccEeeEEEecCCCcEEEEEeCCCeEEEEEcCCCCCCCCeeeeeccCCCeeEEE
Q 014454 201 AQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLA 280 (424)
Q Consensus 201 g~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~v~ 280 (424)
+.|++|++.+... .......+.+|...|.++.|++++. +++++.|+.|++||++++.. +..+.+|...|++++
T Consensus 119 ~~v~iw~~~~~~~--~~~~~~~~~~h~~~v~~~~~~~~~~--l~s~s~d~~i~~wd~~~~~~---~~~~~~h~~~v~~~~ 191 (340)
T 1got_B 119 NICSIYNLKTREG--NVRVSRELAGHTGYLSCCRFLDDNQ--IVTSSGDTTCALWDIETGQQ---TTTFTGHTGDVMSLS 191 (340)
T ss_dssp CEEEEEETTTCSB--SCEEEEEEECCSSCEEEEEEEETTE--EEEEETTSCEEEEETTTTEE---EEEECCCSSCEEEEE
T ss_pred CeEEEEECccCCC--cceeEEEecCCCccEEEEEECCCCc--EEEEECCCcEEEEECCCCcE---EEEEcCCCCceEEEE
Confidence 9999999976532 2234556788999999999998864 56999999999999998653 677888999999999
Q ss_pred ecCCCCeEEEEEeCCCcEEEEECCCCCCcceEecCCCCCEEEEEEcCCCCcEEEEEECCCeEEEeeCCCCCcccCCCCcC
Q 014454 281 FNPFNEWILATGSTDKTVKLFDLRKISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPEDAE 360 (424)
Q Consensus 281 ~~~~~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~ 360 (424)
|+|++. +|++|+.|+.|++||+++ +.++..+.+|...|++++|+|++. +|++++.||.|++||++...
T Consensus 192 ~~~~~~-~l~sg~~d~~v~~wd~~~-~~~~~~~~~h~~~v~~v~~~p~~~-~l~s~s~d~~v~iwd~~~~~--------- 259 (340)
T 1got_B 192 LAPDTR-LFVSGACDASAKLWDVRE-GMCRQTFTGHESDINAICFFPNGN-AFATGSDDATCRLFDLRADQ--------- 259 (340)
T ss_dssp ECTTSS-EEEEEETTSCEEEEETTT-CSEEEEECCCSSCEEEEEECTTSS-EEEEEETTSCEEEEETTTTE---------
T ss_pred ECCCCC-EEEEEeCCCcEEEEECCC-CeeEEEEcCCcCCEEEEEEcCCCC-EEEEEcCCCcEEEEECCCCc---------
Confidence 999887 799999999999999998 688889999999999999999995 79999999999999998742
Q ss_pred CCCCeeeEEE--cCCCCCcceEEeCCCCCcEEEEEeCCCcEEEEecCCcc
Q 014454 361 DGPPELLFIH--GGHTSKISDFSWNPCEDWVISSVAEDNILQIWQMAENI 408 (424)
Q Consensus 361 ~~~~~~~~~~--~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~ 408 (424)
.+..+ ..+...|.+++|+|+++ +|++|+.||.|++||+.++.
T Consensus 260 -----~~~~~~~~~~~~~v~~~~~s~~g~-~l~~g~~d~~i~vwd~~~~~ 303 (340)
T 1got_B 260 -----ELMTYSHDNIICGITSVSFSKSGR-LLLAGYDDFNCNVWDALKAD 303 (340)
T ss_dssp -----EEEEECCTTCCSCEEEEEECTTSS-EEEEEETTSEEEEEETTTCC
T ss_pred -----EEEEEccCCcccceEEEEECCCCC-EEEEECCCCeEEEEEcccCc
Confidence 23332 33445799999999999 79999999999999987653
No 16
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=1.8e-39 Score=297.75 Aligned_cols=262 Identities=17% Similarity=0.211 Sum_probs=207.4
Q ss_pred ccCCceeEEEecCCCCcEEEEEeCCCeEEEEeCCCCCCC-CCCCCCCCCcEEEecCCCceeEEEecCCCCceEEEEeCCC
Q 014454 123 NHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSK-PPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDDA 201 (424)
Q Consensus 123 ~h~~~v~~~~~~p~~~~~latg~~dg~v~iw~~~~~~~~-~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg 201 (424)
.|...|.+++|+|+|. +|++++ |+++++||.....-. ...............|...|.+++|+|++ .|++|+.||
T Consensus 28 ~~~~~v~~~~fs~dG~-~l~~~s-d~~~r~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d~--~l~~~s~dg 103 (344)
T 4gqb_B 28 CMERQLEAARYRSDGA-LLLGAS-SLSGRCWAGSLWLFKDPCAAPNEGFCSAGVQTEAGVADLTWVGER--GILVASDSG 103 (344)
T ss_dssp SCCSEEEEEEECTTSC-EEEEEE-CCSSSCCCEEEEEESSGGGTTCGGGCSEEEEESSCEEEEEEETTT--EEEEEETTS
T ss_pred cccCCEEEEEECCCCC-EEEEEe-CCceEEeeceeeeeccccccCCcceeeeeeccCCCEEEEEEeCCC--eEEEEECCC
Confidence 4677899999999997 777766 677777763210000 00000011122334467889999999974 589999999
Q ss_pred cEEEEeCCCCCCCCcccceeeeecCCccEeeEEEecCCCcEEEEEeCCCeEEEEEcCCCCCCCCeeeeeccCCCeeEEEe
Q 014454 202 QICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAF 281 (424)
Q Consensus 202 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~v~~ 281 (424)
+|+|||+.+++..... .....+|...|++++|+|++. +|++|+.|++|++||+++++. +..+.+|...|++++|
T Consensus 104 ~v~lWd~~~~~~~~~~--~~~~~~H~~~V~~v~~spdg~-~l~sgs~d~~i~iwd~~~~~~---~~~~~~h~~~V~~~~~ 177 (344)
T 4gqb_B 104 AVELWELDENETLIVS--KFCKYEHDDIVSTVSVLSSGT-QAVSGSKDICIKVWDLAQQVV---LSSYRAHAAQVTCVAA 177 (344)
T ss_dssp EEEEEEECTTSSCEEE--EEEEECCSSCEEEEEECTTSS-EEEEEETTSCEEEEETTTTEE---EEEECCCSSCEEEEEE
T ss_pred EEEEEeccCCCceeEe--eccccCCCCCEEEEEECCCCC-EEEEEeCCCeEEEEECCCCcE---EEEEcCcCCceEEEEe
Confidence 9999999887543221 233557999999999999987 567999999999999998664 7888899999999999
Q ss_pred cCCCCeEEEEEeCCCcEEEEECCCCCCcceEec--CCCCCEEEEEEcCCCCcEEEEEECCCeEEEeeCCCCCcccCCCCc
Q 014454 282 NPFNEWILATGSTDKTVKLFDLRKISTALHTFD--SHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPEDA 359 (424)
Q Consensus 282 ~~~~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~--~h~~~v~~~~~sp~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~ 359 (424)
+|++..+|++|+.|++|++||+++ ++++..+. .|...+.+++|+|++..+|++|+.||.|+|||++++
T Consensus 178 ~~~~~~~l~s~s~D~~v~iwd~~~-~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~~~--------- 247 (344)
T 4gqb_B 178 SPHKDSVFLSCSEDNRILLWDTRC-PKPASQIGCSAPGYLPTSLAWHPQQSEVFVFGDENGTVSLVDTKST--------- 247 (344)
T ss_dssp CSSCTTEEEEEETTSCEEEEETTS-SSCEEECC----CCCEEEEEECSSCTTEEEEEETTSEEEEEESCC----------
T ss_pred cCCCCCceeeeccccccccccccc-cceeeeeecceeeccceeeeecCCCCcceEEeccCCcEEEEECCCC---------
Confidence 999987899999999999999998 56666654 456679999999987789999999999999999875
Q ss_pred CCCCCeeeEEEcCCCCCcceEEeCCCCCcEEEEEeCCCcEEEEecCCccC
Q 014454 360 EDGPPELLFIHGGHTSKISDFSWNPCEDWVISSVAEDNILQIWQMAENIY 409 (424)
Q Consensus 360 ~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~ 409 (424)
+++..+.+|...|++++|+|++..+|++++.|++|+|||+.++.+
T Consensus 248 -----~~~~~~~~h~~~v~~v~fsp~g~~~lasgs~D~~i~vwd~~~~~~ 292 (344)
T 4gqb_B 248 -----SCVLSSAVHSQCVTGLVFSPHSVPFLASLSEDCSLAVLDSSLSEL 292 (344)
T ss_dssp ------CCEEEECCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTCCEE
T ss_pred -----cEEEEEcCCCCCEEEEEEccCCCeEEEEEeCCCeEEEEECCCCcE
Confidence 556778899999999999999865799999999999999988754
No 17
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=1.2e-38 Score=289.88 Aligned_cols=272 Identities=18% Similarity=0.287 Sum_probs=217.3
Q ss_pred EEEEEEe-ccCCceeEEEecCCCCcEEEEEeCCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCceeEEEecCCCCceE
Q 014454 116 VQIIQQI-NHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHL 194 (424)
Q Consensus 116 ~~~~~~~-~h~~~v~~~~~~p~~~~~latg~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l 194 (424)
+.+...+ +|.+.|++++|+|++..+|++|+.|++|++|++..... ....+...+.+|...|.+++|+|++. +|
T Consensus 7 ~~l~~~l~gH~~~V~~l~~~~~~~~~l~s~s~D~~v~~W~~~~~~~-----~~~~~~~~~~~h~~~v~~~~~s~dg~-~l 80 (319)
T 3frx_A 7 LVLRGTLEGHNGWVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQ-----KFGVPVRSFKGHSHIVQDCTLTADGA-YA 80 (319)
T ss_dssp EEEEEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEEEEEETT-----EEEEEEEEEECCSSCEEEEEECTTSS-EE
T ss_pred EEEEEEEccccceEEEEEccCCCccEEEEecCCccEEEecCCCCCc-----cccccceEEeCCcccEEEEEECCCCC-EE
Confidence 4444444 69999999999998767999999999999999864111 01234567889999999999999887 79
Q ss_pred EEEeCCCcEEEEeCCCCCCCCcccceeeeecCCccEeeEEEecCCCcEEEEEeCCCeEEEEEcCCCCCCCCeeeeeccCC
Q 014454 195 LSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQS 274 (424)
Q Consensus 195 ~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~ 274 (424)
++|+.|++|++||+.++ ..+..+.+|...|.+++|+|++. ++++|+.|+.|++||++.. .+..+.+|..
T Consensus 81 ~s~s~D~~v~~wd~~~~------~~~~~~~~h~~~v~~~~~~~~~~-~l~s~s~D~~i~vwd~~~~----~~~~~~~h~~ 149 (319)
T 3frx_A 81 LSASWDKTLRLWDVATG------ETYQRFVGHKSDVMSVDIDKKAS-MIISGSRDKTIKVWTIKGQ----CLATLLGHND 149 (319)
T ss_dssp EEEETTSEEEEEETTTT------EEEEEEECCSSCEEEEEECTTSC-EEEEEETTSCEEEEETTSC----EEEEECCCSS
T ss_pred EEEeCCCEEEEEECCCC------CeeEEEccCCCcEEEEEEcCCCC-EEEEEeCCCeEEEEECCCC----eEEEEeccCC
Confidence 99999999999999876 34667889999999999999986 5679999999999999753 3677788999
Q ss_pred CeeEEEecCCCC-----eEEEEEeCCCcEEEEECCCCCCcceEecCCCCCEEEEEEcCCCCcEEEEEECCCeEEEeeCCC
Q 014454 275 EVNCLAFNPFNE-----WILATGSTDKTVKLFDLRKISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSR 349 (424)
Q Consensus 275 ~v~~v~~~~~~~-----~~l~tg~~dg~i~iwd~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~l~s~~~dg~i~iwd~~~ 349 (424)
.|.+++|.|... .+|++|+.|+.|++||++. ......+.+|...|.+++|+|++. +|++++.||.|+|||+..
T Consensus 150 ~v~~~~~~~~~~~~~~~~~l~s~~~d~~i~~wd~~~-~~~~~~~~~h~~~v~~~~~sp~g~-~l~s~~~dg~i~iwd~~~ 227 (319)
T 3frx_A 150 WVSQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQ-FQIEADFIGHNSNINTLTASPDGT-LIASAGKDGEIMLWNLAA 227 (319)
T ss_dssp CEEEEEECCC------CCEEEEEETTSCEEEEETTT-TEEEEEECCCCSCEEEEEECTTSS-EEEEEETTCEEEEEETTT
T ss_pred cEEEEEEccCCCCCCCccEEEEEeCCCEEEEEECCc-chhheeecCCCCcEEEEEEcCCCC-EEEEEeCCCeEEEEECCC
Confidence 999999998532 3699999999999999998 677888899999999999999996 899999999999999987
Q ss_pred CCcccCCCCcC---------CC-----------------CCeeeEEEc--------CCCCCcceEEeCCCCCcEEEEEeC
Q 014454 350 IDEEQTPEDAE---------DG-----------------PPELLFIHG--------GHTSKISDFSWNPCEDWVISSVAE 395 (424)
Q Consensus 350 ~~~~~~~~~~~---------~~-----------------~~~~~~~~~--------~h~~~v~~~~~~~~~~~~l~s~~~ 395 (424)
........... ++ +..++..+. .|...+.+++|+|+++ +|++|+.
T Consensus 228 ~~~~~~~~~~~~v~~~~~sp~~~~la~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~-~l~sg~~ 306 (319)
T 3frx_A 228 KKAMYTLSAQDEVFSLAFSPNRYWLAAATATGIKVFSLDPQYLVDDLRPEFAGYSKAAEPHAVSLAWSADGQ-TLFAGYT 306 (319)
T ss_dssp TEEEEEEECCSCEEEEEECSSSSEEEEEETTEEEEEEETTEEEEEEECCCCTTCCGGGCCCEEEEEECTTSS-EEEEEET
T ss_pred CcEEEEecCCCcEEEEEEcCCCCEEEEEcCCCcEEEEeCcCeeeeccCccccccccCcCcceeEEEECCCCC-EEEEeec
Confidence 65332211100 00 001111111 2345688999999999 6899999
Q ss_pred CCcEEEEecCCc
Q 014454 396 DNILQIWQMAEN 407 (424)
Q Consensus 396 dg~i~vw~~~~~ 407 (424)
||.|+||++.++
T Consensus 307 Dg~i~vWd~~t~ 318 (319)
T 3frx_A 307 DNVIRVWQVMTA 318 (319)
T ss_dssp TSCEEEEEEEEC
T ss_pred CceEEEEEEeec
Confidence 999999998753
No 18
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=7.6e-39 Score=294.48 Aligned_cols=274 Identities=22% Similarity=0.401 Sum_probs=219.0
Q ss_pred EEEEEEe-ccCC-ceeEEEecCCCCcEEEEEeCCCeEEEEeCCCCCCCCCCCCCCCCcE-EEecCCCceeEEEecCCCCc
Q 014454 116 VQIIQQI-NHDG-EVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDL-RLRGHSTEGYGLSWSKFKEG 192 (424)
Q Consensus 116 ~~~~~~~-~h~~-~v~~~~~~p~~~~~latg~~dg~v~iw~~~~~~~~~~~~~~~~~~~-~~~~h~~~v~~l~~~~~~~~ 192 (424)
+.++..+ +|.+ .|.+++|+|++. +||+|+.|++|+||++.. ....... ...+|...|.+++|+|++.
T Consensus 5 ~~~~~~~~~h~~~~v~~l~~sp~g~-~las~~~D~~i~iw~~~~--------~~~~~~~~~~~~h~~~v~~~~~sp~g~- 74 (345)
T 3fm0_A 5 LVLLGRVPAHPDSRCWFLAWNPAGT-LLASCGGDRRIRIWGTEG--------DSWICKSVLSEGHQRTVRKVAWSPCGN- 74 (345)
T ss_dssp EEEEEEECCSTTSCEEEEEECTTSS-CEEEEETTSCEEEEEEET--------TEEEEEEEECSSCSSCEEEEEECTTSS-
T ss_pred EEEeeeecCCCCCcEEEEEECCCCC-EEEEEcCCCeEEEEEcCC--------CcceeeeeeccccCCcEEEEEECCCCC-
Confidence 4445444 6887 999999999986 899999999999999876 1111112 2357999999999999887
Q ss_pred eEEEEeCCCcEEEEeCCCCCCCCcccceeeeecCCccEeeEEEecCCCcEEEEEeCCCeEEEEEcCCCCCCCCeeeeecc
Q 014454 193 HLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAH 272 (424)
Q Consensus 193 ~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~dg~i~i~d~~~~~~~~~~~~~~~~ 272 (424)
+|++|+.|+.|++|++.... ...+..+.+|...|.+++|+|++. +|++|+.|+.|++||++.......+..+..|
T Consensus 75 ~l~s~s~D~~v~iw~~~~~~----~~~~~~~~~h~~~v~~v~~sp~~~-~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~h 149 (345)
T 3fm0_A 75 YLASASFDATTCIWKKNQDD----FECVTTLEGHENEVKSVAWAPSGN-LLATCSRDKSVWVWEVDEEDEYECVSVLNSH 149 (345)
T ss_dssp EEEEEETTSCEEEEEECCC-----EEEEEEECCCSSCEEEEEECTTSS-EEEEEETTSCEEEEEECTTSCEEEEEEECCC
T ss_pred EEEEEECCCcEEEEEccCCC----eEEEEEccCCCCCceEEEEeCCCC-EEEEEECCCeEEEEECCCCCCeEEEEEecCc
Confidence 89999999999999987542 234567788999999999999986 6679999999999999886543445667789
Q ss_pred CCCeeEEEecCCCCeEEEEEeCCCcEEEEECCCCC-CcceEecCCCCCEEEEEEcCCCCcEEEEEECCCeEEEeeCCCCC
Q 014454 273 QSEVNCLAFNPFNEWILATGSTDKTVKLFDLRKIS-TALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRID 351 (424)
Q Consensus 273 ~~~v~~v~~~~~~~~~l~tg~~dg~i~iwd~~~~~-~~~~~~~~h~~~v~~~~~sp~~~~~l~s~~~dg~i~iwd~~~~~ 351 (424)
...|.+++|+|++. +|++|+.|+.|++||++... .+...+.+|...|.+++|+|++. +|++++.|++|+||+.....
T Consensus 150 ~~~v~~~~~~p~~~-~l~s~s~d~~i~~w~~~~~~~~~~~~~~~h~~~v~~l~~sp~g~-~l~s~s~D~~v~iW~~~~~~ 227 (345)
T 3fm0_A 150 TQDVKHVVWHPSQE-LLASASYDDTVKLYREEEDDWVCCATLEGHESTVWSLAFDPSGQ-RLASCSDDRTVRIWRQYLPG 227 (345)
T ss_dssp CSCEEEEEECSSSS-CEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECTTSS-EEEEEETTSCEEEEEEECTT
T ss_pred CCCeEEEEECCCCC-EEEEEeCCCcEEEEEecCCCEEEEEEecCCCCceEEEEECCCCC-EEEEEeCCCeEEEeccccCC
Confidence 99999999999998 69999999999999998632 24578889999999999999995 79999999999999975543
Q ss_pred cccCCCCc-CCCCCeeeEEEcC-CCCCcceEEeCCCCCcEEEEEeCCCcEEEEecCCc
Q 014454 352 EEQTPEDA-EDGPPELLFIHGG-HTSKISDFSWNPCEDWVISSVAEDNILQIWQMAEN 407 (424)
Q Consensus 352 ~~~~~~~~-~~~~~~~~~~~~~-h~~~v~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~ 407 (424)
........ ......++..+.+ |...|++++|+|++. .|++++.|+.|++|+...+
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~-~l~s~~~d~~i~vw~~~~~ 284 (345)
T 3fm0_A 228 NEQGVACSGSDPSWKCICTLSGFHSRTIYDIAWCQLTG-ALATACGDDAIRVFQEDPN 284 (345)
T ss_dssp CTTCCCCC---CEEEEEEEECSSCSSCEEEEEECTTTC-CEEEEETTSCEEEEEECTT
T ss_pred CCccceeeccCCccceeEEecCCCCCcEEEEEEecCCC-EEEEEeCCCeEEEEEeCCC
Confidence 32221111 0111234455555 888999999999999 6899999999999998765
No 19
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=7.7e-39 Score=298.44 Aligned_cols=259 Identities=15% Similarity=0.272 Sum_probs=218.4
Q ss_pred EEEeccCCceeEEEecCCCCcEEEEEeCCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCceeEEEecCCCCceEEEEe
Q 014454 119 IQQINHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGS 198 (424)
Q Consensus 119 ~~~~~h~~~v~~~~~~p~~~~~latg~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~ 198 (424)
....+|.+.|++++|+|++. +||+|+.||+|+|||+.+ ......+..|...|.+++|+|++. +|++|+
T Consensus 60 ~~l~gH~~~V~~~~~sp~~~-~l~s~s~D~~v~iWd~~~----------~~~~~~~~~h~~~v~~~~~s~~g~-~las~~ 127 (380)
T 3iz6_a 60 RTLQGHSGKVYSLDWTPEKN-WIVSASQDGRLIVWNALT----------SQKTHAIKLHCPWVMECAFAPNGQ-SVACGG 127 (380)
T ss_dssp EEECCCSSCEEEEEECTTSS-CEEEEETTSEEEEEETTT----------TEEEEEEECCCTTCCCCEECTTSS-EEEECC
T ss_pred ecccccccEEEEEEEcCCCC-EEEEEeCCCeEEEEECCC----------CccceEEecCCCCEEEEEECCCCC-EEEEee
Confidence 33457999999999999886 799999999999999977 455678889999999999999988 799999
Q ss_pred CCCcEEEEeCCCCCCC-CcccceeeeecCCccEeeEEEecCCCcEEEEEeCCCeEEEEEcCCCCCCCCeeee-----ecc
Q 014454 199 DDAQICLWDINAAPKN-KSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSV-----VAH 272 (424)
Q Consensus 199 ~dg~i~iwd~~~~~~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~dg~i~i~d~~~~~~~~~~~~~-----~~~ 272 (424)
.|+.|++|++...... ........+.+|.+.|.++.|+|++...|++|+.|++|++||++++.. +..+ .+|
T Consensus 128 ~d~~v~iw~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~---~~~~~~~~~~~h 204 (380)
T 3iz6_a 128 LDSACSIFNLSSQADRDGNMPVSRVLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQR---ISIFGSEFPSGH 204 (380)
T ss_dssp SSSCCEEEECCCCSSCCCSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCCE---EEEECCCSSSSC
T ss_pred CCCcEEEEECCCCccccCCccceeeccCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCCcE---EEEeecccCCCC
Confidence 9999999999764321 222344567789999999999998777778999999999999998764 4333 568
Q ss_pred CCCeeEEEecCCCCeEEEEEeCCCcEEEEECCCCCCcceEecCCCCCEEEEEEcCCCCcEEEEEECCCeEEEeeCCCCCc
Q 014454 273 QSEVNCLAFNPFNEWILATGSTDKTVKLFDLRKISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDE 352 (424)
Q Consensus 273 ~~~v~~v~~~~~~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~l~s~~~dg~i~iwd~~~~~~ 352 (424)
...|.+++|++.+..+|++|+.|++|++||++....++..+.+|...|.+++|+|++. +|++|+.||+|+|||++.+.
T Consensus 205 ~~~v~~~~~~~~~~~~l~sgs~D~~v~~wd~~~~~~~~~~~~~h~~~v~~v~~~p~~~-~l~s~s~D~~i~lwd~~~~~- 282 (380)
T 3iz6_a 205 TADVLSLSINSLNANMFISGSCDTTVRLWDLRITSRAVRTYHGHEGDINSVKFFPDGQ-RFGTGSDDGTCRLFDMRTGH- 282 (380)
T ss_dssp CSCEEEEEECSSSCCEEEEEETTSCEEEEETTTTCCCCEEECCCSSCCCEEEECTTSS-EEEEECSSSCEEEEETTTTE-
T ss_pred ccCeEEEEeecCCCCEEEEEECCCeEEEEECCCCCcceEEECCcCCCeEEEEEecCCC-eEEEEcCCCeEEEEECCCCc-
Confidence 8999999998855558999999999999999976788999999999999999999996 79999999999999998753
Q ss_pred ccCCCCcCCCCCeeeEEEcCC-------CCCcceEEeCCCCCcEEEEEeCCCcEEEEecCCcc
Q 014454 353 EQTPEDAEDGPPELLFIHGGH-------TSKISDFSWNPCEDWVISSVAEDNILQIWQMAENI 408 (424)
Q Consensus 353 ~~~~~~~~~~~~~~~~~~~~h-------~~~v~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~ 408 (424)
.+..+..+ ...|++++|+|+++ +|++|+.||.|++||+..+.
T Consensus 283 -------------~~~~~~~~~~~~~~~~~~v~~~~~s~~g~-~l~~g~~dg~i~vwd~~~~~ 331 (380)
T 3iz6_a 283 -------------QLQVYNREPDRNDNELPIVTSVAFSISGR-LLFAGYSNGDCYVWDTLLAE 331 (380)
T ss_dssp -------------EEEEECCCCSSSCCSSCSCSEEEECSSSS-EEEEECTTSCEEEEETTTCC
T ss_pred -------------EEEEecccccccccccCceEEEEECCCCC-EEEEEECCCCEEEEECCCCc
Confidence 23333322 23589999999999 79999999999999987653
No 20
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=6e-39 Score=296.38 Aligned_cols=258 Identities=19% Similarity=0.245 Sum_probs=207.9
Q ss_pred eccCCceeEEEecCCCCcEEEEEeC------CCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCceeEEEecCCCCceEE
Q 014454 122 INHDGEVNRARYMPQNPFLIATKTV------SAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLL 195 (424)
Q Consensus 122 ~~h~~~v~~~~~~p~~~~~latg~~------dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~ 195 (424)
..|.+.|++++|+|+|. +||+|+. |+.|++|+...... .........+|...|.+++|+|++. ++
T Consensus 39 ~~H~~~V~~v~fSpDG~-~las~s~d~~~~wd~~v~~~~~~~~~~------~~~~~~~~~~~~~~V~~~~~s~d~~--~l 109 (357)
T 4g56_B 39 ACMEVQIGAVRYRRDGA-LLLAASSLSSRTWGGSIWVFKDPEGAP------NESLCTAGVQTEAGVTDVAWVSEKG--IL 109 (357)
T ss_dssp -CCCSEEEEEEECSSSC-EEEEEECSSSSSCCEEEEEESSCC---------CGGGCSEEEECSSCEEEEEEETTTE--EE
T ss_pred ccccCCEEEEEECCCCC-EEEEEcCCCCccccCeEEEEECCCCCc------ceeEecccCCCCCCEEEEEEcCCCC--EE
Confidence 36999999999999997 8999987 78899999866211 1222345567999999999999764 77
Q ss_pred EEeCCCcEEEEeCCCCCCCCcccceeeeecCCccEeeEEEecCCCcEEEEEeCCCeEEEEEcCCCCCCCCeeeeeccCCC
Q 014454 196 SGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSE 275 (424)
Q Consensus 196 s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~ 275 (424)
+++.||+|++||+.+++..... .....+|...|++++|+|++. +|++|+.||.|++||++++.. +..+..|...
T Consensus 110 ~~s~dg~v~lWd~~~~~~~~~~--~~~~~~h~~~V~~v~~spdg~-~l~sgs~dg~v~iwd~~~~~~---~~~~~~h~~~ 183 (357)
T 4g56_B 110 VASDSGAVELWEILEKESLLVN--KFAKYEHDDIVKTLSVFSDGT-QAVSGGKDFSVKVWDLSQKAV---LKSYNAHSSE 183 (357)
T ss_dssp EEETTSCEEEC--------CCC--CEEECCCSSCEEEEEECSSSS-EEEEEETTSCEEEEETTTTEE---EEEECCCSSC
T ss_pred EEECCCEEEEeeccccceeEEE--eeccCCCCCCEEEEEECCCCC-EEEEEeCCCeEEEEECCCCcE---EEEEcCCCCC
Confidence 8889999999999876543221 123457999999999999987 557999999999999998664 7778899999
Q ss_pred eeEEEecCCCCeEEEEEeCCCcEEEEECCCCCCcceEe--cCCCCCEEEEEEcCCCCcEEEEEECCCeEEEeeCCCCCcc
Q 014454 276 VNCLAFNPFNEWILATGSTDKTVKLFDLRKISTALHTF--DSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEE 353 (424)
Q Consensus 276 v~~v~~~~~~~~~l~tg~~dg~i~iwd~~~~~~~~~~~--~~h~~~v~~~~~sp~~~~~l~s~~~dg~i~iwd~~~~~~~ 353 (424)
|++++|+|++..++++++.||.|++||+++ ++++..+ ..|...+.+++|+|++..+|++|+.|+.|++||++..
T Consensus 184 v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~-~~~~~~~~~~~~~~~v~~v~~sp~~~~~la~g~~d~~i~~wd~~~~--- 259 (357)
T 4g56_B 184 VNCVAACPGKDTIFLSCGEDGRILLWDTRK-PKPATRIDFCASDTIPTSVTWHPEKDDTFACGDETGNVSLVNIKNP--- 259 (357)
T ss_dssp EEEEEECTTCSSCEEEEETTSCEEECCTTS-SSCBCBCCCTTCCSCEEEEEECTTSTTEEEEEESSSCEEEEESSCG---
T ss_pred EEEEEEccCCCceeeeeccCCceEEEECCC-CceeeeeeeccccccccchhhhhcccceEEEeecccceeEEECCCC---
Confidence 999999999877899999999999999998 4554443 4567789999999998789999999999999999875
Q ss_pred cCCCCcCCCCCeeeEEEcCCCCCcceEEeCCCCCcEEEEEeCCCcEEEEecCCccC
Q 014454 354 QTPEDAEDGPPELLFIHGGHTSKISDFSWNPCEDWVISSVAEDNILQIWQMAENIY 409 (424)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~ 409 (424)
.++..+.+|...|++++|+|++..+|++++.|++|+|||+.++.+
T Consensus 260 -----------~~~~~~~~~~~~v~~l~~sp~~~~~lasgs~D~~i~iwd~~~~~~ 304 (357)
T 4g56_B 260 -----------DSAQTSAVHSQNITGLAYSYHSSPFLASISEDCTVAVLDADFSEV 304 (357)
T ss_dssp -----------GGCEEECCCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTSCEE
T ss_pred -----------cEeEEEeccceeEEEEEEcCCCCCEEEEEeCCCEEEEEECCCCcE
Confidence 456778899999999999999865799999999999999988743
No 21
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=9.9e-38 Score=287.99 Aligned_cols=255 Identities=15% Similarity=0.244 Sum_probs=217.5
Q ss_pred EeccCCceeEEEecCCCCcEEEEEeCCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCceeEEEecCCCCceEEEEeCC
Q 014454 121 QINHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDD 200 (424)
Q Consensus 121 ~~~h~~~v~~~~~~p~~~~~latg~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~d 200 (424)
..+|.+.|++++|+|++. +||+|+.||+|+|||... ......+..|...|.+++|+|++. +|++|+.|
T Consensus 60 l~gH~~~V~~~~~s~d~~-~l~s~s~Dg~v~vWd~~~----------~~~~~~~~~~~~~v~~~~~sp~g~-~lasg~~d 127 (354)
T 2pbi_B 60 LKGHGNKVLCMDWCKDKR-RIVSSSQDGKVIVWDSFT----------TNKEHAVTMPCTWVMACAYAPSGC-AIACGGLD 127 (354)
T ss_dssp EECCSSCEEEEEECTTSS-EEEEEETTSEEEEEETTT----------CCEEEEEECSSSCCCEEEECTTSS-EEEEESTT
T ss_pred ecCCCCeEEEEEECCCCC-EEEEEeCCCeEEEEECCC----------CCcceEEecCCCCEEEEEECCCCC-EEEEeeCC
Confidence 458999999999999886 899999999999999876 345567788999999999999988 79999999
Q ss_pred CcEEEEeCCCCCCCCcccceeeeecCCccEeeEEEecCCCcEEEEEeCCCeEEEEEcCCCCCCCCeeeeeccCCCeeEEE
Q 014454 201 AQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLA 280 (424)
Q Consensus 201 g~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~v~ 280 (424)
+.+++|++..............+..|...|.+++|+|++.. +++++.|++|++||+++++. +..+.+|...|.+++
T Consensus 128 ~~i~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~-l~t~s~D~~v~lwd~~~~~~---~~~~~~h~~~v~~~~ 203 (354)
T 2pbi_B 128 NKCSVYPLTFDKNENMAAKKKSVAMHTNYLSACSFTNSDMQ-ILTASGDGTCALWDVESGQL---LQSFHGHGADVLCLD 203 (354)
T ss_dssp SEEEEEECCCCTTCCSGGGCEEEEECSSCEEEEEECSSSSE-EEEEETTSEEEEEETTTCCE---EEEEECCSSCEEEEE
T ss_pred CCEEEEEEeccccccccccceeeeccCCcEEEEEEeCCCCE-EEEEeCCCcEEEEeCCCCeE---EEEEcCCCCCeEEEE
Confidence 99999999765433333445667789999999999999864 56999999999999998664 778889999999999
Q ss_pred ecCCC-CeEEEEEeCCCcEEEEECCCCCCcceEecCCCCCEEEEEEcCCCCcEEEEEECCCeEEEeeCCCCCcccCCCCc
Q 014454 281 FNPFN-EWILATGSTDKTVKLFDLRKISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPEDA 359 (424)
Q Consensus 281 ~~~~~-~~~l~tg~~dg~i~iwd~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~ 359 (424)
|+|.. ..+|++|+.||.|++||+++ ++++..+..|...|++++|+|++. +|++++.|++|++||++...
T Consensus 204 ~~~~~~g~~l~sgs~Dg~v~~wd~~~-~~~~~~~~~h~~~v~~v~~~p~~~-~l~s~s~D~~v~lwd~~~~~-------- 273 (354)
T 2pbi_B 204 LAPSETGNTFVSGGCDKKAMVWDMRS-GQCVQAFETHESDVNSVRYYPSGD-AFASGSDDATCRLYDLRADR-------- 273 (354)
T ss_dssp ECCCSSCCEEEEEETTSCEEEEETTT-CCEEEEECCCSSCEEEEEECTTSS-EEEEEETTSCEEEEETTTTE--------
T ss_pred EEeCCCCCEEEEEeCCCeEEEEECCC-CcEEEEecCCCCCeEEEEEeCCCC-EEEEEeCCCeEEEEECCCCc--------
Confidence 98852 24799999999999999998 688899999999999999999995 79999999999999998742
Q ss_pred CCCCCeeeEEEc--CCCCCcceEEeCCCCCcEEEEEeCCCcEEEEecCCcc
Q 014454 360 EDGPPELLFIHG--GHTSKISDFSWNPCEDWVISSVAEDNILQIWQMAENI 408 (424)
Q Consensus 360 ~~~~~~~~~~~~--~h~~~v~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~ 408 (424)
.+..+. .+...+.+++|+|+++ +|++++.|+.|++||+.++.
T Consensus 274 ------~~~~~~~~~~~~~~~~~~~s~~g~-~l~~g~~d~~i~vwd~~~~~ 317 (354)
T 2pbi_B 274 ------EVAIYSKESIIFGASSVDFSLSGR-LLFAGYNDYTINVWDVLKGS 317 (354)
T ss_dssp ------EEEEECCTTCCSCEEEEEECTTSS-EEEEEETTSCEEEEETTTCS
T ss_pred ------EEEEEcCCCcccceeEEEEeCCCC-EEEEEECCCcEEEEECCCCc
Confidence 233333 2344688999999999 79999999999999997653
No 22
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=8.6e-38 Score=285.66 Aligned_cols=259 Identities=20% Similarity=0.361 Sum_probs=198.2
Q ss_pred cCCceeEEEecCCCCcEEEEEeCCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCceeEEEecCCCCceEEEEeCCCcE
Q 014454 124 HDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDDAQI 203 (424)
Q Consensus 124 h~~~v~~~~~~p~~~~~latg~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i 203 (424)
|.+.|++++|+|++. +||+|+.|++|+||++....... ........+.+|...|.+++|+|++. +|++|+.|++|
T Consensus 57 h~~~v~~v~~sp~~~-~las~s~D~~v~iw~~~~~~~~~---~~~~~~~~~~~h~~~V~~v~~sp~g~-~las~s~D~~v 131 (330)
T 2hes_X 57 HKKAIRSVAWRPHTS-LLAAGSFDSTVSIWAKEESADRT---FEMDLLAIIEGHENEVKGVAWSNDGY-YLATCSRDKSV 131 (330)
T ss_dssp CCSCEEEEEECTTSS-EEEEEETTSCEEEEEC----------CCCEEEEEEC----CEEEEEECTTSC-EEEEEETTSCE
T ss_pred ccCCEEEEEECCCCC-EEEEEeCCCcEEEEEcccCcCcc---ccceeEEEEcCCCCcEEEEEECCCCC-EEEEEeCCCEE
Confidence 999999999999886 89999999999999986421100 11234567889999999999999887 89999999999
Q ss_pred EEEeCCCCCCCCcccceeeeecCCccEeeEEEecCCCcEEEEEeCCCeEEEEEcCCCCCCCCeeeeeccCCCeeEEEecC
Q 014454 204 CLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNP 283 (424)
Q Consensus 204 ~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~v~~~~ 283 (424)
++||++... .....+..+.+|...|.+++|+|++. +|++++.|++|++||++.+. ...+..+.+|...|.+++|+|
T Consensus 132 ~iwd~~~~~--~~~~~~~~~~~h~~~v~~v~~~p~~~-~l~s~s~D~~i~iW~~~~~~-~~~~~~~~~h~~~v~~~~~~~ 207 (330)
T 2hes_X 132 WIWETDESG--EEYECISVLQEHSQDVKHVIWHPSEA-LLASSSYDDTVRIWKDYDDD-WECVAVLNGHEGTVWSSDFDK 207 (330)
T ss_dssp EEEECCTTC--CCCEEEEEECCCSSCEEEEEECSSSS-EEEEEETTSCEEEEEEETTE-EEEEEEECCCSSCEEEEEECC
T ss_pred EEEeccCCC--CCeEEEEEeccCCCceEEEEECCCCC-EEEEEcCCCeEEEEECCCCC-eeEEEEccCCCCcEEEEEecC
Confidence 999995432 12234566788999999999999986 66799999999999998653 124677789999999999999
Q ss_pred CC-CeEEEEEeCCCcEEEEECCCCC-------CcceEecC-CCCCEEEEEEcCCCCcEEEEEECCCeEEEeeCCCCCccc
Q 014454 284 FN-EWILATGSTDKTVKLFDLRKIS-------TALHTFDS-HKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQ 354 (424)
Q Consensus 284 ~~-~~~l~tg~~dg~i~iwd~~~~~-------~~~~~~~~-h~~~v~~~~~sp~~~~~l~s~~~dg~i~iwd~~~~~~~~ 354 (424)
++ ..+|++|+.|++|++||++... .....+.. |...|.+++|++++ +|++++.||.|+||+...+..
T Consensus 208 ~~~~~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~~--~l~s~~~dg~v~iw~~~~~~~-- 283 (330)
T 2hes_X 208 TEGVFRLCSGSDDSTVRVWKYMGDDEDDQQEWVCEAILPDVHKRQVYNVAWGFNG--LIASVGADGVLAVYEEVDGEW-- 283 (330)
T ss_dssp SSSSCEEEEEETTSCEEEEEEEEECTTSCEEEEEEEECCSCCSSCEEEEEECTTS--CEEEEETTSCEEEEEEETTEE--
T ss_pred CCCeeEEEEEeCCCeEEEEEecCCCccccceeEEeeecccccccceEEEEEcCCC--EEEEEeCCCEEEEEEcCCCce--
Confidence 83 2369999999999999997521 23344444 89999999999765 589999999999999865310
Q ss_pred CCCCcCCCCCeee-EEEcCCCC-CcceEEeCC--CCCcEEEEEeCCCcEEEEecCC
Q 014454 355 TPEDAEDGPPELL-FIHGGHTS-KISDFSWNP--CEDWVISSVAEDNILQIWQMAE 406 (424)
Q Consensus 355 ~~~~~~~~~~~~~-~~~~~h~~-~v~~~~~~~--~~~~~l~s~~~dg~i~vw~~~~ 406 (424)
..+ ....+|.. .|+.++|+| +++ +|++++.||.|+||++..
T Consensus 284 ----------~~~~~~~~~h~~~~v~~v~~~~~~~~~-~las~s~Dg~v~~W~~~~ 328 (330)
T 2hes_X 284 ----------KVFAKRALCHGVYEINVVKWLELNGKT-ILATGGDDGIVNFWSLEK 328 (330)
T ss_dssp ----------EEEEEESCTTTTSCEEEEEEC-----C-CEEEEETTSEEEEEEC--
T ss_pred ----------EEEeccccccccceEEEEEEecCCCce-EEEEecCCCcEEEEEecc
Confidence 122 23357876 899999999 567 799999999999999865
No 23
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=100.00 E-value=3e-39 Score=293.44 Aligned_cols=259 Identities=19% Similarity=0.310 Sum_probs=205.7
Q ss_pred eccCCceeEEEecCCCCcEEEEEeCCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCceeEEEecCC--CCceEEEEeC
Q 014454 122 INHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKF--KEGHLLSGSD 199 (424)
Q Consensus 122 ~~h~~~v~~~~~~p~~~~~latg~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~--~~~~l~s~~~ 199 (424)
.+|.+.|++++|+|++. +||+|+.|++|+|||+.. +.......+.+|...|.+++|++. +. +|++|+.
T Consensus 10 ~~H~~~V~~v~~s~~g~-~lasgs~D~~v~lwd~~~--------~~~~~~~~l~gH~~~V~~v~~~~~~~~~-~l~s~s~ 79 (316)
T 3bg1_A 10 TSHEDMIHDAQMDYYGT-RLATCSSDRSVKIFDVRN--------GGQILIADLRGHEGPVWQVAWAHPMYGN-ILASCSY 79 (316)
T ss_dssp ----CCEEEEEECGGGC-EEEEEETTTEEEEEEEET--------TEEEEEEEEECCSSCEEEEEECCGGGSS-CEEEEET
T ss_pred ccccCeEEEeeEcCCCC-EEEEEeCCCeEEEEEecC--------CCcEEEEEEcCCCccEEEEEeCCCCCCC-EEEEEEC
Confidence 47999999999999886 899999999999999976 222345678899999999999863 44 7999999
Q ss_pred CCcEEEEeCCCCCCCCcccceeeeecCCccEeeEEEecCC-CcEEEEEeCCCeEEEEEcCCCCCCCCeeeeeccCCCeeE
Q 014454 200 DAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRH-EYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNC 278 (424)
Q Consensus 200 dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~~~~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~ 278 (424)
|++|++||++++.. .....+.+|...|++++|+|+. ..+|++|+.|+.|++||++..........+..|...|.+
T Consensus 80 D~~v~iWd~~~~~~----~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~~~~~~~~h~~~v~~ 155 (316)
T 3bg1_A 80 DRKVIIWREENGTW----EKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKKINNAHTIGCNA 155 (316)
T ss_dssp TSCEEEECCSSSCC----CEEEEECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEEECCBTTSSSSCBCC
T ss_pred CCEEEEEECCCCcc----eEEEEccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCcceeeeeccccCCcce
Confidence 99999999986532 2345567899999999999983 346789999999999999875421112344678899999
Q ss_pred EEecCCC----------------CeEEEEEeCCCcEEEEECCCCC--CcceEecCCCCCEEEEEEcCCC---CcEEEEEE
Q 014454 279 LAFNPFN----------------EWILATGSTDKTVKLFDLRKIS--TALHTFDSHKEEVFQVGWNPKN---ETILASCC 337 (424)
Q Consensus 279 v~~~~~~----------------~~~l~tg~~dg~i~iwd~~~~~--~~~~~~~~h~~~v~~~~~sp~~---~~~l~s~~ 337 (424)
++|+|+. ..+|++|+.|++|++||++... .++..+.+|...|.+++|+|++ ..+|++++
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l~~h~~~V~~v~~sp~~~~~~~~las~s 235 (316)
T 3bg1_A 156 VSWAPAVVPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKLEAHSDWVRDVAWAPSIGLPTSTIASCS 235 (316)
T ss_dssp CEECCCCCC------CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEEEEECCBCCSSCEEEEECCCCSSCSCCEEEEEE
T ss_pred EEEccccCCccccccccccCccccceEEEecCCCeEEEEEeCCCCccceeeecccCCCceEEEEecCCCCCCCceEEEEc
Confidence 9999973 1369999999999999997532 3567788999999999999986 24899999
Q ss_pred CCCeEEEeeCCCCCcccCCCCcCCCCCeeeEEEcCCCCCcceEEeCCCCCcEEEEEeCCCcEEEEecC
Q 014454 338 LGRRLMVWDLSRIDEEQTPEDAEDGPPELLFIHGGHTSKISDFSWNPCEDWVISSVAEDNILQIWQMA 405 (424)
Q Consensus 338 ~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~vw~~~ 405 (424)
.|++|+||++....... .....+.+|...|++++|+|+++ +|++++.|+.|+||+..
T Consensus 236 ~D~~v~iw~~~~~~~~~----------~~~~~~~~~~~~v~~v~~sp~g~-~las~~~D~~v~lw~~~ 292 (316)
T 3bg1_A 236 QDGRVFIWTCDDASSNT----------WSPKLLHKFNDVVWHVSWSITAN-ILAVSGGDNKVTLWKES 292 (316)
T ss_dssp TTCEEEEEECSSTTCCC----------CBCCEEEECSSCEEEEEECTTTC-CEEEEESSSCEEEEEEC
T ss_pred CCCeEEEEEccCccccc----------hhhhhhhcCCCcEEEEEEcCCCC-EEEEEcCCCeEEEEEEC
Confidence 99999999997632100 01122346788999999999999 68999999999999986
No 24
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=8.3e-38 Score=309.32 Aligned_cols=264 Identities=17% Similarity=0.275 Sum_probs=217.4
Q ss_pred EeccCCceeEEEecCCCCcEEEEEeCCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCceeEEEecCCCCceEEEEeCC
Q 014454 121 QINHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDD 200 (424)
Q Consensus 121 ~~~h~~~v~~~~~~p~~~~~latg~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~d 200 (424)
..+|.+.|++++|+|++. +||+|+.||+|+|||+.. ........+.+|...|.+++|+|++. +|++++.+
T Consensus 55 ~~~h~~~v~~~~~spdg~-~lasg~~d~~v~lWd~~~--------~~~~~~~~~~~~~~~v~~v~fs~dg~-~l~~~~~~ 124 (611)
T 1nr0_A 55 YTEHSHQTTVAKTSPSGY-YCASGDVHGNVRIWDTTQ--------TTHILKTTIPVFSGPVKDISWDSESK-RIAAVGEG 124 (611)
T ss_dssp ECCCSSCEEEEEECTTSS-EEEEEETTSEEEEEESSS--------TTCCEEEEEECSSSCEEEEEECTTSC-EEEEEECC
T ss_pred ecCCCCceEEEEECCCCc-EEEEEeCCCCEEEeECCC--------CcceeeEeecccCCceEEEEECCCCC-EEEEEECC
Confidence 347999999999999986 899999999999999865 22333457889999999999999998 68877764
Q ss_pred ----CcEEEEeCCCCCCCCcccceeeeecCCccEeeEEEecCCCcEEEEEeCCCeEEEEEcCCCCCCCCeeeeeccCCCe
Q 014454 201 ----AQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEV 276 (424)
Q Consensus 201 ----g~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v 276 (424)
+.|++||... ....+.+|...|++++|+|+++..|++++.|++|++||.+..+ ....+.+|...|
T Consensus 125 ~~~~~~v~~wd~~~--------~~~~l~gh~~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~~~---~~~~l~~H~~~V 193 (611)
T 1nr0_A 125 RERFGHVFLFDTGT--------SNGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFK---FKSTFGEHTKFV 193 (611)
T ss_dssp SSCSEEEEETTTCC--------BCBCCCCCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTTBE---EEEEECCCSSCE
T ss_pred CCceeEEEEeeCCC--------CcceecCCCCCceEEEECCCCCeEEEEEeCCCeEEEEECCCCe---EeeeeccccCce
Confidence 4788888532 2345678999999999999988778899999999999987754 366788999999
Q ss_pred eEEEecCCCCeEEEEEeCCCcEEEEECCCCCCcceEec-------CCCCCEEEEEEcCCCCcEEEEEECCCeEEEeeCCC
Q 014454 277 NCLAFNPFNEWILATGSTDKTVKLFDLRKISTALHTFD-------SHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSR 349 (424)
Q Consensus 277 ~~v~~~~~~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~-------~h~~~v~~~~~sp~~~~~l~s~~~dg~i~iwd~~~ 349 (424)
++++|+|++. +||+|+.|++|++||+++ ++++..+. +|...|.+++|+|++. +|++++.|++|+|||+.+
T Consensus 194 ~~v~fspdg~-~las~s~D~~i~lwd~~~-g~~~~~~~~~~~~~~~h~~~V~~v~~spdg~-~l~s~s~D~~v~lWd~~~ 270 (611)
T 1nr0_A 194 HSVRYNPDGS-LFASTGGDGTIVLYNGVD-GTKTGVFEDDSLKNVAHSGSVFGLTWSPDGT-KIASASADKTIKIWNVAT 270 (611)
T ss_dssp EEEEECTTSS-EEEEEETTSCEEEEETTT-CCEEEECBCTTSSSCSSSSCEEEEEECTTSS-EEEEEETTSEEEEEETTT
T ss_pred EEEEECCCCC-EEEEEECCCcEEEEECCC-CcEeeeeccccccccccCCCEEEEEECCCCC-EEEEEeCCCeEEEEeCCC
Confidence 9999999998 799999999999999987 56666663 7999999999999996 799999999999999987
Q ss_pred CCcccCCCCcC-----------------------------CCCCeeeEEEcCCCCCcceEEeCCCCCcEEEEEeCCCcEE
Q 014454 350 IDEEQTPEDAE-----------------------------DGPPELLFIHGGHTSKISDFSWNPCEDWVISSVAEDNILQ 400 (424)
Q Consensus 350 ~~~~~~~~~~~-----------------------------~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~ 400 (424)
+.......... .........+.+|...|++++|+|+++ +|++++.|+.|+
T Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~i~~~~~~~~~~~~~~~gh~~~v~~l~~spdg~-~l~s~s~D~~v~ 349 (611)
T 1nr0_A 271 LKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINFVNPELGSIDQVRYGHNKAITALSSSADGK-TLFSADAEGHIN 349 (611)
T ss_dssp TEEEEEEECCSSGGGCEEEEEECSSCEEEEETTCCEEEEETTTTEEEEEECCCSSCEEEEEECTTSS-EEEEEETTSCEE
T ss_pred CceeeeecCCCCccceeEEEEEcCCEEEEEeCCCcEEEEeCCCCCcceEEcCCCCCEEEEEEeCCCC-EEEEEeCCCcEE
Confidence 65432211000 001134556789999999999999999 799999999999
Q ss_pred EEecCCccC
Q 014454 401 IWQMAENIY 409 (424)
Q Consensus 401 vw~~~~~~~ 409 (424)
+||+.++..
T Consensus 350 ~Wd~~~~~~ 358 (611)
T 1nr0_A 350 SWDISTGIS 358 (611)
T ss_dssp EEETTTCCE
T ss_pred EEECCCCce
Confidence 999987643
No 25
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=7.6e-38 Score=301.27 Aligned_cols=330 Identities=11% Similarity=0.117 Sum_probs=229.9
Q ss_pred CCCCccEEEEccCCCCCCCCCCceEEEEEeecC--------------CCCCCCeEEEEEEECCCCCCCcccCCCCCcCCC
Q 014454 40 LEWPSLTVEWLPDREEPPGKDYSVQKMILGTHT--------------SENEPNYLMLAQVQLPLDDSENDARHYDDDRSD 105 (424)
Q Consensus 40 ~~~p~~~~~~~p~~~~~~~~~~~~~~~~~gt~~--------------~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~ 105 (424)
+..+..+++|+|+...... .-..+.+++|+.. +++.++.|+|+.+.-.
T Consensus 132 ~~~~V~sv~w~p~~~~~~~-~~~~~~LAv~~~~~~~~~~~~~~~~laS~s~D~tI~iWd~~~~----------------- 193 (524)
T 2j04_B 132 VGGLVTDIAWLNIEENTDI-GKDIQYLAVAVSQYMDEPLNEHLEMFDKEKHSSCIQIFKMNTS----------------- 193 (524)
T ss_dssp CCC--CCCSCEEECCCCSS-CSSEEEEEEEEEC------------------CEEEEEEEEETT-----------------
T ss_pred CCCceeEEEecccCCCCcc-CcCCeEEEEEEecccCCccchhhhhhccCCCCceEEEEEccCC-----------------
Confidence 4677888999997632100 0123677777732 2334455666665311
Q ss_pred CCCCCCCCCcEEEEE-EeccCCceeEEEecCCC-----CcEEEEEeCCCeEEEEeCCCCCCCCC-CCCCCCCcEEEecCC
Q 014454 106 FGGFGCANGKVQIIQ-QINHDGEVNRARYMPQN-----PFLIATKTVSAEVYVFDYSKHPSKPP-LDGACSPDLRLRGHS 178 (424)
Q Consensus 106 ~~~~~~~~~~~~~~~-~~~h~~~v~~~~~~p~~-----~~~latg~~dg~v~iw~~~~~~~~~~-~~~~~~~~~~~~~h~ 178 (424)
........ ...|.+.|++++|+|++ ..+||+|+.||+|+|||+........ ......+...+.+|.
T Consensus 194 -------~~~~~~~~~l~~~~~~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~~p~~~l~~h~ 266 (524)
T 2j04_B 194 -------TLHCVKVQTIVHSFGEVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKMCEKPSLTLSLAD 266 (524)
T ss_dssp -------TCCEEEEEEEEECCCSEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEECCCSCSEEECCTT
T ss_pred -------CCCceEEEEEEecCCcEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccceeecCceEEEEcCC
Confidence 00111222 23567999999999962 34899999999999999976321100 000123456788999
Q ss_pred CceeEEEecCCCCceEEEEeCCCcEEEEeCCCCCCCCcccceeeeecCCccEeeE--EEecCCCcEEEEEeCCCeEEEEE
Q 014454 179 TEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDV--AWHLRHEYLFGSVGDDQYLLIWD 256 (424)
Q Consensus 179 ~~v~~l~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~--~~~~~~~~~~~s~~~dg~i~i~d 256 (424)
..|++++|++. . .|++|+.||+|++||++++.. +...+.+|...|+++ +|+|++..+||+++.|++|+|||
T Consensus 267 ~~v~sv~~s~~-~-~lasgs~DgtV~lWD~~~~~~-----~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD 339 (524)
T 2j04_B 267 SLITTFDFLSP-T-TVVCGFKNGFVAEFDLTDPEV-----PSFYDQVHDSYILSVSTAYSDFEDTVVSTVAVDGYFYIFN 339 (524)
T ss_dssp TCEEEEEESSS-S-EEEEEETTSEEEEEETTBCSS-----CSEEEECSSSCEEEEEEECCTTSCCEEEEEETTSEEEEEC
T ss_pred CCEEEEEecCC-C-eEEEEeCCCEEEEEECCCCCC-----ceEEeecccccEEEEEEEcCCCCCeEEEEeccCCeEEEEE
Confidence 99999999984 3 799999999999999986532 234567899999999 56776646889999999999999
Q ss_pred cCCCCCCCCeeeeeccCC--CeeEEEecCCCCeEEEEEeCCCcEEEEECCCCCCcceEecCCCCCEEEEEEcCCCCcEEE
Q 014454 257 LRTPSVSKPVQSVVAHQS--EVNCLAFNPFNEWILATGSTDKTVKLFDLRKISTALHTFDSHKEEVFQVGWNPKNETILA 334 (424)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~--~v~~v~~~~~~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~l~ 334 (424)
+++++. +..+.+|.. .|.+++|+|++. .|++++.|++|++||++. ..++..+.+|...|++++|+|+++ +|+
T Consensus 340 ~~~~~~---~~~~~~~~~~~~v~~v~fsp~~~-~l~s~~~d~tv~lwd~~~-~~~~~~l~gH~~~V~sva~Sp~g~-~l~ 413 (524)
T 2j04_B 340 PKDIAT---TKTTVSRFRGSNLVPVVYCPQIY-SYIYSDGASSLRAVPSRA-AFAVHPLVSRETTITAIGVSRLHP-MVL 413 (524)
T ss_dssp GGGHHH---HCEEEEECSCCSCCCEEEETTTT-EEEEECSSSEEEEEETTC-TTCCEEEEECSSCEEEEECCSSCC-BCE
T ss_pred CCCCCc---ccccccccccCcccceEeCCCcC-eEEEeCCCCcEEEEECcc-cccceeeecCCCceEEEEeCCCCC-eEE
Confidence 998653 334445543 588999999988 589999999999999998 667788889999999999999996 689
Q ss_pred EEECCCeEEEeeCCCCCccc--------------CCCCcCCC----------------CCeeeEEEcCCCCCcceEEeCC
Q 014454 335 SCCLGRRLMVWDLSRIDEEQ--------------TPEDAEDG----------------PPELLFIHGGHTSKISDFSWNP 384 (424)
Q Consensus 335 s~~~dg~i~iwd~~~~~~~~--------------~~~~~~~~----------------~~~~~~~~~~h~~~v~~~~~~~ 384 (424)
+|+.||+|+|||+....... ......++ ...++..+.+|...|++++|+|
T Consensus 414 Sgs~Dgtv~lwd~~~~~~~~~~~~~~~~~~~~v~~v~~sp~g~~~~~~~~~~~~~~~~~g~~~~~l~gh~~~V~~Vafsp 493 (524)
T 2j04_B 414 AGSADGSLIITNAARRLLHGIKNSSATQKSLRLWKWDYSIKDDKYRIDSSYEVYPLTVNDVSKAKIDAHGINITCTKWNE 493 (524)
T ss_dssp EEETTTEEECCBSCSSTTTCC------CCCCEEEECBCCSSSCEEEECCCCCCCC-------------CCCSCCCEEECC
T ss_pred EEECCCEEEEEechHhhccccccCccceeeeEEEEeccCCCCCeEEccCCceecccccCCcceeeecCCCceEEEEECCC
Confidence 99999999999975431110 00000000 1345566788999999999999
Q ss_pred CCC--cEEEEEeCCCcEEEEecCCc
Q 014454 385 CED--WVISSVAEDNILQIWQMAEN 407 (424)
Q Consensus 385 ~~~--~~l~s~~~dg~i~vw~~~~~ 407 (424)
+++ .++++|+.||.|+||++...
T Consensus 494 ~~~~~~~lAsg~~~g~vrlw~l~~~ 518 (524)
T 2j04_B 494 TSAGGKCYAFSNSAGLLTLEYLSLE 518 (524)
T ss_dssp STTTTTEEEEECTTSEEEEEECSCC
T ss_pred CCCccHHHHhhccCceEEEEEcccc
Confidence 963 37999999999999998654
No 26
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.1e-37 Score=283.02 Aligned_cols=265 Identities=17% Similarity=0.296 Sum_probs=205.3
Q ss_pred EeccCCceeEEEecCCCCcEEEEEeCCCeEEEEeCCCCCCCCCCCCCCCCcEEE-ec-CCCceeEEEecCCCCceEEEEe
Q 014454 121 QINHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRL-RG-HSTEGYGLSWSKFKEGHLLSGS 198 (424)
Q Consensus 121 ~~~h~~~v~~~~~~p~~~~~latg~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~-~~-h~~~v~~l~~~~~~~~~l~s~~ 198 (424)
..+|.+.|++++|+|+ +||+|+.|+.|+||++.. ........+ .+ |...|.+++|+|++. +|++|+
T Consensus 10 ~~~h~~~v~~~~~s~~---~las~~~D~~i~lw~~~~--------~~~~~~~~~~~~~h~~~v~~v~~sp~~~-~las~s 77 (330)
T 2hes_X 10 LKLYKEKIWSFDFSQG---ILATGSTDRKIKLVSVKY--------DDFTLIDVLDETAHKKAIRSVAWRPHTS-LLAAGS 77 (330)
T ss_dssp EECCSSCEEEEEEETT---EEEEEESSSCEEEEECSS--------SCCEEEEEECTTCCCSCEEEEEECTTSS-EEEEEE
T ss_pred eccCCCceeeeccCCC---EEEEEcCCCEEEEEEecC--------CCeEEEEEEecCCccCCEEEEEECCCCC-EEEEEe
Confidence 3479999999999985 899999999999999976 112223344 34 999999999999887 899999
Q ss_pred CCCcEEEEeCCCCCCC-CcccceeeeecCCccEeeEEEecCCCcEEEEEeCCCeEEEEEcCCC-CCCCCeeeeeccCCCe
Q 014454 199 DDAQICLWDINAAPKN-KSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTP-SVSKPVQSVVAHQSEV 276 (424)
Q Consensus 199 ~dg~i~iwd~~~~~~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~dg~i~i~d~~~~-~~~~~~~~~~~~~~~v 276 (424)
.|++|++||+...... .....+..+.+|...|.+++|+|++. +|++|+.|+.|++||++.. .....+..+.+|...|
T Consensus 78 ~D~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g~-~las~s~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v 156 (330)
T 2hes_X 78 FDSTVSIWAKEESADRTFEMDLLAIIEGHENEVKGVAWSNDGY-YLATCSRDKSVWIWETDESGEEYECISVLQEHSQDV 156 (330)
T ss_dssp TTSCEEEEEC-------CCCEEEEEEC----CEEEEEECTTSC-EEEEEETTSCEEEEECCTTCCCCEEEEEECCCSSCE
T ss_pred CCCcEEEEEcccCcCccccceeEEEEcCCCCcEEEEEECCCCC-EEEEEeCCCEEEEEeccCCCCCeEEEEEeccCCCce
Confidence 9999999999643211 12244566788999999999999986 5679999999999999643 2223456778899999
Q ss_pred eEEEecCCCCeEEEEEeCCCcEEEEECCCCC-CcceEecCCCCCEEEEEEcCCC-CcEEEEEECCCeEEEeeCCCCCccc
Q 014454 277 NCLAFNPFNEWILATGSTDKTVKLFDLRKIS-TALHTFDSHKEEVFQVGWNPKN-ETILASCCLGRRLMVWDLSRIDEEQ 354 (424)
Q Consensus 277 ~~v~~~~~~~~~l~tg~~dg~i~iwd~~~~~-~~~~~~~~h~~~v~~~~~sp~~-~~~l~s~~~dg~i~iwd~~~~~~~~ 354 (424)
++++|+|++. +|++|+.|++|++||++... .++..+.+|...|.+++|+|++ ..+|++++.|++|+|||++......
T Consensus 157 ~~v~~~p~~~-~l~s~s~D~~i~iW~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~D~~v~iw~~~~~~~~~ 235 (330)
T 2hes_X 157 KHVIWHPSEA-LLASSSYDDTVRIWKDYDDDWECVAVLNGHEGTVWSSDFDKTEGVFRLCSGSDDSTVRVWKYMGDDEDD 235 (330)
T ss_dssp EEEEECSSSS-EEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCSSSSCEEEEEETTSCEEEEEEEEECTTS
T ss_pred EEEEECCCCC-EEEEEcCCCeEEEEECCCCCeeEEEEccCCCCcEEEEEecCCCCeeEEEEEeCCCeEEEEEecCCCccc
Confidence 9999999987 79999999999999987622 5778899999999999999983 2479999999999999997642211
Q ss_pred CCCCcCCCCCeeeEEEcC-CCCCcceEEeCCCCCcEEEEEeCCCcEEEEecCCc
Q 014454 355 TPEDAEDGPPELLFIHGG-HTSKISDFSWNPCEDWVISSVAEDNILQIWQMAEN 407 (424)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~-h~~~v~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~ 407 (424)
. ....+...+.+ |...|++++|++++ +|++++.||.|+||++.++
T Consensus 236 ~------~~~~~~~~~~~~h~~~v~~v~~s~~~--~l~s~~~dg~v~iw~~~~~ 281 (330)
T 2hes_X 236 Q------QEWVCEAILPDVHKRQVYNVAWGFNG--LIASVGADGVLAVYEEVDG 281 (330)
T ss_dssp C------EEEEEEEECCSCCSSCEEEEEECTTS--CEEEEETTSCEEEEEEETT
T ss_pred c------ceeEEeeecccccccceEEEEEcCCC--EEEEEeCCCEEEEEEcCCC
Confidence 0 00123334444 88999999999765 5889999999999998765
No 27
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=2.1e-36 Score=274.21 Aligned_cols=260 Identities=22% Similarity=0.405 Sum_probs=217.4
Q ss_pred EEeccCCceeEEEecCCCCcEEEEEeCCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCceeEEEecCCCCceEEEEeC
Q 014454 120 QQINHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSD 199 (424)
Q Consensus 120 ~~~~h~~~v~~~~~~p~~~~~latg~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~ 199 (424)
...+|.+.|++++|+|++. +||+|+.||.|+||++.. ......+.+|...|.+++|+|++. +|++|+.
T Consensus 18 ~~~gh~~~v~~~~~s~~~~-~l~s~~~dg~i~iw~~~~----------~~~~~~~~~h~~~v~~~~~~~~~~-~l~s~~~ 85 (312)
T 4ery_A 18 TLAGHTKAVSSVKFSPNGE-WLASSSADKLIKIWGAYD----------GKFEKTISGHKLGISDVAWSSDSN-LLVSASD 85 (312)
T ss_dssp EECCCSSCEEEEEECTTSS-EEEEEETTSCEEEEETTT----------CCEEEEECCCSSCEEEEEECTTSS-EEEEEET
T ss_pred EEcccCCcEEEEEECCCCC-EEEEeeCCCeEEEEeCCC----------cccchhhccCCCceEEEEEcCCCC-EEEEECC
Confidence 3457999999999999886 899999999999999876 345667889999999999999887 8999999
Q ss_pred CCcEEEEeCCCCCCCCcccceeeeecCCccEeeEEEecCCCcEEEEEeCCCeEEEEEcCCCCCCCCeeeeeccCCCeeEE
Q 014454 200 DAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCL 279 (424)
Q Consensus 200 dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~v 279 (424)
||.|++||++++ ..+..+.+|...|.+++|+|++. ++++++.||.|++||+++++. +..+..|..+|.++
T Consensus 86 d~~i~vwd~~~~------~~~~~~~~~~~~v~~~~~~~~~~-~l~s~~~d~~i~iwd~~~~~~---~~~~~~~~~~v~~~ 155 (312)
T 4ery_A 86 DKTLKIWDVSSG------KCLKTLKGHSNYVFCCNFNPQSN-LIVSGSFDESVRIWDVKTGKC---LKTLPAHSDPVSAV 155 (312)
T ss_dssp TSEEEEEETTTC------CEEEEEECCSSCEEEEEECSSSS-EEEEEETTSCEEEEETTTCCE---EEEECCCSSCEEEE
T ss_pred CCEEEEEECCCC------cEEEEEcCCCCCEEEEEEcCCCC-EEEEEeCCCcEEEEECCCCEE---EEEecCCCCcEEEE
Confidence 999999999876 34566788999999999999986 567999999999999998653 67778899999999
Q ss_pred EecCCCCeEEEEEeCCCcEEEEECCCCCCcceEe-cCCCCCEEEEEEcCCCCcEEEEEECCCeEEEeeCCCCCcccCCCC
Q 014454 280 AFNPFNEWILATGSTDKTVKLFDLRKISTALHTF-DSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPED 358 (424)
Q Consensus 280 ~~~~~~~~~l~tg~~dg~i~iwd~~~~~~~~~~~-~~h~~~v~~~~~sp~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~ 358 (424)
+|+|++. +|++|+.||.|++||+++ ++.+..+ ..+...+..++|+|++. +|++++.|+.|++||++..........
T Consensus 156 ~~~~~~~-~l~~~~~d~~i~~wd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~~~d~~i~iwd~~~~~~~~~~~~ 232 (312)
T 4ery_A 156 HFNRDGS-LIVSSSYDGLCRIWDTAS-GQCLKTLIDDDNPPVSFVKFSPNGK-YILAATLDNTLKLWDYSKGKCLKTYTG 232 (312)
T ss_dssp EECTTSS-EEEEEETTSCEEEEETTT-CCEEEEECCSSCCCEEEEEECTTSS-EEEEEETTTEEEEEETTTTEEEEEECS
T ss_pred EEcCCCC-EEEEEeCCCcEEEEECCC-CceeeEEeccCCCceEEEEECCCCC-EEEEEcCCCeEEEEECCCCcEEEEEEe
Confidence 9999988 699999999999999998 4555554 45667899999999996 799999999999999987542211000
Q ss_pred -----------------------cCC--------CCCeeeEEEcCCCCCcceEEeCCCCCcEEEEEe--CCCcEEEEecC
Q 014454 359 -----------------------AED--------GPPELLFIHGGHTSKISDFSWNPCEDWVISSVA--EDNILQIWQMA 405 (424)
Q Consensus 359 -----------------------~~~--------~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~--~dg~i~vw~~~ 405 (424)
..+ ....++..+.+|...|.+++|+|+++ ++++++ .|+.|++|+..
T Consensus 233 ~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~p~~~-~l~s~~~~~d~~i~~W~~d 311 (312)
T 4ery_A 233 HKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTEN-IIASAALENDKTIKLWKSD 311 (312)
T ss_dssp SCCSSSCCCEEEECSSSCEEEECCTTSCEEEEETTTCCEEEEECCCSSCEEEEEECSSSS-EEEEEECTTTCCEEEEECC
T ss_pred cCCceEEEEEEEEeCCCcEEEEECCCCEEEEEECCCchhhhhhhccCCcEEEEeecCcCC-ceEEEEccCCccEEEecCC
Confidence 001 12355677889999999999999999 688776 69999999974
No 28
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=3.4e-36 Score=276.61 Aligned_cols=263 Identities=20% Similarity=0.301 Sum_probs=204.7
Q ss_pred EEEeccCCceeEEEecCCCCcEEEEEeCCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCceeEEEecCCCCceEEEEe
Q 014454 119 IQQINHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGS 198 (424)
Q Consensus 119 ~~~~~h~~~v~~~~~~p~~~~~latg~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~ 198 (424)
....+|...|++++|+|++. ++++|+.|++|+|||+.+ ......+.+|...|.+++|+|++. +|++|+
T Consensus 70 ~~l~~h~~~V~~~~~~~~~~-~l~s~s~D~~v~lwd~~~----------~~~~~~~~~h~~~v~~v~~sp~~~-~l~s~~ 137 (343)
T 2xzm_R 70 KALTGHNHFVSDLALSQENC-FAISSSWDKTLRLWDLRT----------GTTYKRFVGHQSEVYSVAFSPDNR-QILSAG 137 (343)
T ss_dssp EEECCCSSCEEEEEECSSTT-EEEEEETTSEEEEEETTS----------SCEEEEEECCCSCEEEEEECSSTT-EEEEEE
T ss_pred chhccCCCceEEEEECCCCC-EEEEEcCCCcEEEEECCC----------CcEEEEEcCCCCcEEEEEECCCCC-EEEEEc
Confidence 34457999999999999886 899999999999999987 456678899999999999999988 799999
Q ss_pred CCCcEEEEeCCCCCCCCcccceeeeecCCccEeeEEEecCCC---------cEEEEEeCCCeEEEEEcCCCCCCCCeeee
Q 014454 199 DDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHE---------YLFGSVGDDQYLLIWDLRTPSVSKPVQSV 269 (424)
Q Consensus 199 ~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~---------~~~~s~~~dg~i~i~d~~~~~~~~~~~~~ 269 (424)
.|+.|++||+.... .........|...|.+++|+|++. .+|++++.||.|++||.+. .....+
T Consensus 138 ~d~~i~~wd~~~~~----~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~----~~~~~~ 209 (343)
T 2xzm_R 138 AEREIKLWNILGEC----KFSSAEKENHSDWVSCVRYSPIMKSANKVQPFAPYFASVGWDGRLKVWNTNF----QIRYTF 209 (343)
T ss_dssp TTSCEEEEESSSCE----EEECCTTTSCSSCEEEEEECCCCCSCSCCCSSCCEEEEEETTSEEEEEETTT----EEEEEE
T ss_pred CCCEEEEEeccCCc----eeeeecccCCCceeeeeeeccccccccccCCCCCEEEEEcCCCEEEEEcCCC----ceeEEE
Confidence 99999999997321 111111236888999999999862 4678999999999999532 235667
Q ss_pred eccCCCeeEEEecCCCCeEEEEEeCCCcEEEEECCCCCCcceEecCCCCCEEEEEEcCCCCcEEEEEECCCeEEEeeCCC
Q 014454 270 VAHQSEVNCLAFNPFNEWILATGSTDKTVKLFDLRKISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSR 349 (424)
Q Consensus 270 ~~~~~~v~~v~~~~~~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~l~s~~~dg~i~iwd~~~ 349 (424)
..|...|++++|+|++. +|++|+.||.|++||++....+...+. +...|.+++|+|++. +++ ++.|+.|++|++..
T Consensus 210 ~~h~~~v~~~~~s~~g~-~l~sgs~dg~v~iwd~~~~~~~~~~~~-~~~~v~~v~~sp~~~-~la-~~~d~~v~iw~~~~ 285 (343)
T 2xzm_R 210 KAHESNVNHLSISPNGK-YIATGGKDKKLLIWDILNLTYPQREFD-AGSTINQIAFNPKLQ-WVA-VGTDQGVKIFNLMT 285 (343)
T ss_dssp ECCSSCEEEEEECTTSS-EEEEEETTCEEEEEESSCCSSCSEEEE-CSSCEEEEEECSSSC-EEE-EEESSCEEEEESSS
T ss_pred cCccccceEEEECCCCC-EEEEEcCCCeEEEEECCCCcccceeec-CCCcEEEEEECCCCC-EEE-EECCCCEEEEEeCC
Confidence 88999999999999998 699999999999999976455555553 456799999999985 555 55677899999986
Q ss_pred CCcccCCCCcCCCCCeeeEEEcCCCCCcceEEeCCCCCcEEEEEeCCCcEEEEecCCc
Q 014454 350 IDEEQTPEDAEDGPPELLFIHGGHTSKISDFSWNPCEDWVISSVAEDNILQIWQMAEN 407 (424)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~ 407 (424)
......... ...+........+|...|++++|+|+++ .|++|+.||.|++|++.++
T Consensus 286 ~~~~~~~~~-~~~~~~~~~~~~~~~~~v~~~~~sp~g~-~l~sg~~Dg~v~~w~~~~g 341 (343)
T 2xzm_R 286 QSKAPVCTI-EAEPITKAEGQKGKNPQCTSLAWNALGK-KLFAGFTDGVIRTFSFETS 341 (343)
T ss_dssp CCSCSEEEC-CCCSGGGBTTBCCSCCCEEEEEECSSSC-CEEEEETTSEEEEEEEEEE
T ss_pred CCCCceEEe-ecCcchhhhhhcCCCCceEEEEECCCCC-eEEEecCCceEEEEEEEcc
Confidence 543210000 0000000111237888899999999999 5899999999999998764
No 29
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=100.00 E-value=8.7e-38 Score=294.61 Aligned_cols=265 Identities=18% Similarity=0.324 Sum_probs=221.8
Q ss_pred EeccCCceeEEEecCCCCcEEEEEeCCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCceeEEEecCCCCceEEEEeCC
Q 014454 121 QINHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDD 200 (424)
Q Consensus 121 ~~~h~~~v~~~~~~p~~~~~latg~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~d 200 (424)
.+.|...|++++|+|++. +||+|+.||.|++|++..... .......+.+|...|.+++|+|++..+|++++.|
T Consensus 63 ~~~~~~~v~~~~~s~~~~-~l~~~~~dg~v~vw~~~~~~~------~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d 135 (416)
T 2pm9_A 63 SLQVDSKFNDLDWSHNNK-IIAGALDNGSLELYSTNEANN------AINSMARFSNHSSSVKTVKFNAKQDNVLASGGNN 135 (416)
T ss_dssp CCCCSSCEEEEEECSSSS-CEEEEESSSCEEEECCSSTTS------CCCEEEECCCSSSCCCEEEECSSSTTBEEEECSS
T ss_pred EEecCCceEEEEECCCCC-eEEEEccCCeEEEeecccccc------cccchhhccCCccceEEEEEcCCCCCEEEEEcCC
Confidence 346889999999999886 799999999999999976211 1235667888999999999999845589999999
Q ss_pred CcEEEEeCCCCCCCC---cccceeeeecCCccEeeEEEecCCCcEEEEEeCCCeEEEEEcCCCCCCCCeeeeecc-----
Q 014454 201 AQICLWDINAAPKNK---SLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAH----- 272 (424)
Q Consensus 201 g~i~iwd~~~~~~~~---~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~dg~i~i~d~~~~~~~~~~~~~~~~----- 272 (424)
|.|++||+.+..... ..........|...|.+++|+|++..+|++++.||.|++||+++++. +..+..+
T Consensus 136 g~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~---~~~~~~~~~~~~ 212 (416)
T 2pm9_A 136 GEIFIWDMNKCTESPSNYTPLTPGQSMSSVDEVISLAWNQSLAHVFASAGSSNFASIWDLKAKKE---VIHLSYTSPNSG 212 (416)
T ss_dssp SCEEBCBTTTTSSCTTTCCCBCCCCSCCSSCCCCEEEECSSCTTEEEEESSSSCEEEEETTTTEE---EEEECCCCCSSC
T ss_pred CeEEEEECCCCccccccccccccccccCCCCCeeEEEeCCCCCcEEEEEcCCCCEEEEECCCCCc---ceEEeccccccc
Confidence 999999998775111 11112234578999999999999667888999999999999998653 5555554
Q ss_pred -CCCeeEEEecCCCCeEEEEEeCCC---cEEEEECCCCCCcceEec-CCCCCEEEEEEcC-CCCcEEEEEECCCeEEEee
Q 014454 273 -QSEVNCLAFNPFNEWILATGSTDK---TVKLFDLRKISTALHTFD-SHKEEVFQVGWNP-KNETILASCCLGRRLMVWD 346 (424)
Q Consensus 273 -~~~v~~v~~~~~~~~~l~tg~~dg---~i~iwd~~~~~~~~~~~~-~h~~~v~~~~~sp-~~~~~l~s~~~dg~i~iwd 346 (424)
...|++++|+|++..+|++++.|+ .|++||+++...++..+. +|...|.+++|+| ++ .+|++++.||.|++||
T Consensus 213 ~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~s~~~~-~~l~s~~~dg~v~~wd 291 (416)
T 2pm9_A 213 IKQQLSVVEWHPKNSTRVATATGSDNDPSILIWDLRNANTPLQTLNQGHQKGILSLDWCHQDE-HLLLSSGRDNTVLLWN 291 (416)
T ss_dssp CCCCEEEEEECSSCTTEEEEEECCSSSCCCCEEETTSTTSCSBCCCSCCSSCEEEEEECSSCS-SCEEEEESSSEEEEEC
T ss_pred cCCceEEEEECCCCCCEEEEEECCCCCceEEEEeCCCCCCCcEEeecCccCceeEEEeCCCCC-CeEEEEeCCCCEEEee
Confidence 789999999999877899999998 999999998667888888 8999999999999 66 5799999999999999
Q ss_pred CCCCCcccCCCCcCCCCCeeeEEEcCCCCCcceEEeCCCCCcEEEEEeCCCcEEEEecCCccCC
Q 014454 347 LSRIDEEQTPEDAEDGPPELLFIHGGHTSKISDFSWNPCEDWVISSVAEDNILQIWQMAENIYH 410 (424)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~~ 410 (424)
++.. ..+..+.+|...|.+++|+|+++.+|++++.|+.|++|++......
T Consensus 292 ~~~~--------------~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~d~~i~iw~~~~~~~~ 341 (416)
T 2pm9_A 292 PESA--------------EQLSQFPARGNWCFKTKFAPEAPDLFACASFDNKIEVQTLQNLTNT 341 (416)
T ss_dssp SSSC--------------CEEEEEECSSSCCCCEEECTTCTTEEEECCSSSEEEEEESCCCCCS
T ss_pred CCCC--------------ccceeecCCCCceEEEEECCCCCCEEEEEecCCcEEEEEccCCCCC
Confidence 9874 5577788999999999999999448999999999999999887544
No 30
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=100.00 E-value=3.2e-36 Score=277.82 Aligned_cols=308 Identities=16% Similarity=0.287 Sum_probs=234.7
Q ss_pred CCCccEEEEccCCCCCCCCCCceEEEEEeecCCCCCCCeEEEEEEECCCCCCCcccCCCCCcCCCCCCCCCCCCcEEEEE
Q 014454 41 EWPSLTVEWLPDREEPPGKDYSVQKMILGTHTSENEPNYLMLAQVQLPLDDSENDARHYDDDRSDFGGFGCANGKVQIIQ 120 (424)
Q Consensus 41 ~~p~~~~~~~p~~~~~~~~~~~~~~~~~gt~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 120 (424)
.-+..+++|.|+.. ..++.|+. ...+..++++.+. .++.....
T Consensus 18 ~~~v~~~~~~p~~~---------~l~~~~s~--~~~d~~v~iw~~~--------------------------~~~~~~~~ 60 (357)
T 3i2n_A 18 NYTVFDCKWVPCSA---------KFVTMGNF--ARGTGVIQLYEIQ--------------------------HGDLKLLR 60 (357)
T ss_dssp SSCEEEEEECTTSS---------EEEEEEC----CCCEEEEEEEEC--------------------------SSSEEEEE
T ss_pred CCceEEEEEcCCCc---------eEEEecCc--cCCCcEEEEEeCC--------------------------CCccccee
Confidence 34578999999752 22333331 1235678888773 22344556
Q ss_pred EeccCCceeEEEecCCC--CcEEEEEeCCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCceeEEEe------cCCCCc
Q 014454 121 QINHDGEVNRARYMPQN--PFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSW------SKFKEG 192 (424)
Q Consensus 121 ~~~h~~~v~~~~~~p~~--~~~latg~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~------~~~~~~ 192 (424)
...|...|++++|+|++ ..+|++|+.||.|++||+... ..+...+.+|...|.+++| +|++.
T Consensus 61 ~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~---------~~~~~~~~~~~~~v~~~~~~~~~~~s~~~~- 130 (357)
T 3i2n_A 61 EIEKAKPIKCGTFGATSLQQRYLATGDFGGNLHIWNLEAP---------EMPVYSVKGHKEIINAIDGIGGLGIGEGAP- 130 (357)
T ss_dssp EEEESSCEEEEECTTCCTTTCCEEEEETTSCEEEECTTSC---------SSCSEEECCCSSCEEEEEEESGGGCC-CCC-
T ss_pred eecccCcEEEEEEcCCCCCCceEEEecCCCeEEEEeCCCC---------CccEEEEEecccceEEEeeccccccCCCcc-
Confidence 67899999999999983 348999999999999999871 1257788999999999955 67676
Q ss_pred eEEEEeCCCcEEEEeCCCCCCCCcccceeeeecCC----ccEeeEE----EecCCCcEEEEEeCCCeEEEEEcCCCCCCC
Q 014454 193 HLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHE----GVVEDVA----WHLRHEYLFGSVGDDQYLLIWDLRTPSVSK 264 (424)
Q Consensus 193 ~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~----~~v~~~~----~~~~~~~~~~s~~~dg~i~i~d~~~~~~~~ 264 (424)
+|++++.||.|++||++.... ....+..|. ..+.+++ |+|++. ++++++.||.|++||++++..
T Consensus 131 ~l~~~~~d~~i~vwd~~~~~~-----~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~-- 202 (357)
T 3i2n_A 131 EIVTGSRDGTVKVWDPRQKDD-----PVANMEPVQGENKRDCWTVAFGNAYNQEER-VVCAGYDNGDIKLFDLRNMAL-- 202 (357)
T ss_dssp EEEEEETTSCEEEECTTSCSS-----CSEEECCCTTSCCCCEEEEEEECCCC-CCC-EEEEEETTSEEEEEETTTTEE--
T ss_pred EEEEEeCCCeEEEEeCCCCCC-----cceeccccCCCCCCceEEEEEEeccCCCCC-EEEEEccCCeEEEEECccCce--
Confidence 799999999999999987642 223333333 3788988 677776 667999999999999998663
Q ss_pred CeeeeeccCCCeeEEEecC---CCCeEEEEEeCCCcEEEEECCCCCCcceEec-----CCCCCEEEEEEcCCCCcEEEEE
Q 014454 265 PVQSVVAHQSEVNCLAFNP---FNEWILATGSTDKTVKLFDLRKISTALHTFD-----SHKEEVFQVGWNPKNETILASC 336 (424)
Q Consensus 265 ~~~~~~~~~~~v~~v~~~~---~~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~-----~h~~~v~~~~~sp~~~~~l~s~ 336 (424)
.....|...|.+++|+| ++. +|++|+.||.|++||+++ ..++..+. .|...|++++|+|+++.+|+++
T Consensus 203 --~~~~~~~~~v~~~~~~~~~~~~~-~l~~~~~dg~i~i~d~~~-~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~ 278 (357)
T 3i2n_A 203 --RWETNIKNGVCSLEFDRKDISMN-KLVATSLEGKFHVFDMRT-QHPTKGFASVSEKAHKSTVWQVRHLPQNRELFLTA 278 (357)
T ss_dssp --EEEEECSSCEEEEEESCSSSSCC-EEEEEESTTEEEEEEEEE-EETTTEEEEEEEECCSSCEEEEEEETTEEEEEEEE
T ss_pred --eeecCCCCceEEEEcCCCCCCCC-EEEEECCCCeEEEEeCcC-CCcccceeeeccCCCcCCEEEEEECCCCCcEEEEE
Confidence 34467889999999999 777 689999999999999987 45555554 8999999999999986689999
Q ss_pred ECCCeEEEeeCCCCCcccCCCCcC-----CCCCeeeEEEcCCCCCcceEEeCCCCCcEEEEEeCCCcEEEEecCCc
Q 014454 337 CLGRRLMVWDLSRIDEEQTPEDAE-----DGPPELLFIHGGHTSKISDFSWNPCEDWVISSVAEDNILQIWQMAEN 407 (424)
Q Consensus 337 ~~dg~i~iwd~~~~~~~~~~~~~~-----~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~ 407 (424)
+.||.|++||++............ .+...++..+.+|...|++++|+|++++++++++.||.|+||++.+.
T Consensus 279 ~~dg~i~iwd~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~s~~~d~~i~iw~~~~~ 354 (357)
T 3i2n_A 279 GGAGGLHLWKYEYPIQRSKKDSEGIEMGVAGSVSLLQNVTLSTQPISSLDWSPDKRGLCVCSSFDQTVRVLIVTKL 354 (357)
T ss_dssp ETTSEEEEEEEECCSCC--CCTTSCCCCCCCEEEEEEEEECCSSCEEEEEECSSSTTEEEEEETTSEEEEEEECC-
T ss_pred eCCCcEEEeecCCCcccccccCCCCccccccccceeeccccCCCCeeEEEEcCCCCeEEEEecCCCcEEEEECCCc
Confidence 999999999998765432111100 11225678889999999999999999965558999999999999764
No 31
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=100.00 E-value=9.1e-37 Score=279.61 Aligned_cols=275 Identities=19% Similarity=0.309 Sum_probs=212.3
Q ss_pred CcEEEEEE-eccCCceeEEEecCCCCcEEEEEeCCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCceeEEEecCCCCc
Q 014454 114 GKVQIIQQ-INHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEG 192 (424)
Q Consensus 114 ~~~~~~~~-~~h~~~v~~~~~~p~~~~~latg~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~ 192 (424)
.++.+..+ .+|.+.|++|+|+|+++.+||||+.||+|+|||+...... ...+...+.+|...|.+++|+|++.
T Consensus 26 ~~~~l~~tL~GH~~~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~-----~~~~~~~l~~h~~~V~~~~~s~dg~- 99 (340)
T 4aow_A 26 EQMTLRGTLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETN-----YGIPQRALRGHSHFVSDVVISSDGQ- 99 (340)
T ss_dssp CEEEEEEEECCCSSCEEEEEECTTCTTEEEEEETTSCEEEEEECCSSSC-----SEEEEEEECCCSSCEEEEEECTTSS-
T ss_pred CceEEEEEECCccCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCcc-----cceeeEEEeCCCCCEEEEEECCCCC-
Confidence 34555544 4799999999999987679999999999999999863211 1234567889999999999999887
Q ss_pred eEEEEeCCCcEEEEeCCCCCCCC-------------------------------------cccceeeeecCCccEeeEEE
Q 014454 193 HLLSGSDDAQICLWDINAAPKNK-------------------------------------SLEAMQIFKVHEGVVEDVAW 235 (424)
Q Consensus 193 ~l~s~~~dg~i~iwd~~~~~~~~-------------------------------------~~~~~~~~~~~~~~v~~~~~ 235 (424)
+|++|+.|+.|++|+........ .........+|...+..++|
T Consensus 100 ~l~s~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~~~~~d~~~~~~~~~~~~~~~~~v~~~~~ 179 (340)
T 4aow_A 100 FALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRF 179 (340)
T ss_dssp EEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSSCSSCEEEEEE
T ss_pred EEEEEcccccceEEeecccceeeeecCCCCceeEEEEeecCccceeecCCCeEEEEEeCCCceEEEEeccccCcccceEE
Confidence 79999999999999987642110 00112223457888999999
Q ss_pred ecCCC-cEEEEEeCCCeEEEEEcCCCCCCCCeeeeeccCCCeeEEEecCCCCeEEEEEeCCCcEEEEECCCCCCcceEec
Q 014454 236 HLRHE-YLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATGSTDKTVKLFDLRKISTALHTFD 314 (424)
Q Consensus 236 ~~~~~-~~~~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~ 314 (424)
++++. .++++++.|+.|++||+++... +..+.+|...|++++|+|++. +|++|+.||.|++||+++ ..++..+.
T Consensus 180 ~~~~~~~~~~s~~~d~~i~i~d~~~~~~---~~~~~~h~~~v~~~~~s~~~~-~l~s~s~Dg~i~iwd~~~-~~~~~~~~ 254 (340)
T 4aow_A 180 SPNSSNPIIVSCGWDKLVKVWNLANCKL---KTNHIGHTGYLNTVTVSPDGS-LCASGGKDGQAMLWDLNE-GKHLYTLD 254 (340)
T ss_dssp CSCSSSCEEEEEETTSCEEEEETTTTEE---EEEECCCSSCEEEEEECTTSS-EEEEEETTCEEEEEETTT-TEEEEEEE
T ss_pred ccCCCCcEEEEEcCCCEEEEEECCCCce---eeEecCCCCcEEEEEECCCCC-EEEEEeCCCeEEEEEecc-Cceeeeec
Confidence 88753 4677899999999999998653 677788999999999999998 699999999999999998 67777776
Q ss_pred CCCCCEEEEEEcCCCCcEEEEEECCCeEEEeeCCCCCcccCCCCcCCCCCeeeEEEcCCCCCcceEEeCCCCCcEEEEEe
Q 014454 315 SHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPEDAEDGPPELLFIHGGHTSKISDFSWNPCEDWVISSVA 394 (424)
Q Consensus 315 ~h~~~v~~~~~sp~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~ 394 (424)
. ...|.+++|+|++. +++++.|+.|+|||++......... .........+|...|++++|+|+++ +|++|+
T Consensus 255 ~-~~~v~~~~~~~~~~--~~~~~~d~~i~iwd~~~~~~~~~~~-----~~~~~~~~~~h~~~v~~l~~s~dg~-~l~sgs 325 (340)
T 4aow_A 255 G-GDIINALCFSPNRY--WLCAATGPSIKIWDLEGKIIVDELK-----QEVISTSSKAEPPQCTSLAWSADGQ-TLFAGY 325 (340)
T ss_dssp C-SSCEEEEEECSSSS--EEEEEETTEEEEEETTTTEEEEEEC-----CC-------CCCCCEEEEEECTTSS-EEEEEE
T ss_pred C-CceEEeeecCCCCc--eeeccCCCEEEEEECCCCeEEEecc-----ccceeeeccCCCCCEEEEEECCCCC-EEEEEe
Confidence 5 56899999999874 5577789999999998653221111 1122334467889999999999999 699999
Q ss_pred CCCcEEEEecCCcc
Q 014454 395 EDNILQIWQMAENI 408 (424)
Q Consensus 395 ~dg~i~vw~~~~~~ 408 (424)
.||.|+|||+++|.
T Consensus 326 ~Dg~v~iW~~~tGt 339 (340)
T 4aow_A 326 TDNLVRVWQVTIGT 339 (340)
T ss_dssp TTSCEEEEEEEC--
T ss_pred CCCEEEEEeCCCcC
Confidence 99999999998863
No 32
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=100.00 E-value=9.5e-38 Score=296.43 Aligned_cols=269 Identities=17% Similarity=0.251 Sum_probs=204.9
Q ss_pred EeccCCceeEEEecCCCCcEEEEEeCCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCceeEEEecCCCCceEEEEeCC
Q 014454 121 QINHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDD 200 (424)
Q Consensus 121 ~~~h~~~v~~~~~~p~~~~~latg~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~d 200 (424)
...|...|++|+|+|.++.+||+|+.||.|+|||+.. ........+.+|.+.|++|+|+|.+..+|++|+.|
T Consensus 115 ~~~~~~~V~~l~~~P~~~~~lasGs~dg~i~lWd~~~--------~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D 186 (435)
T 4e54_B 115 AAPFDRRATSLAWHPTHPSTVAVGSKGGDIMLWNFGI--------KDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSME 186 (435)
T ss_dssp EEECSSCEEEEEECSSCTTCEEEEETTSCEEEECSSC--------CSCCEEECCCSSSCCCCEEEECSSCTTEEEEECSS
T ss_pred CCCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEEECCC--------CCceeEEEccCCCCCEEEEEEeCCCCCEEEEEeCC
Confidence 3468999999999998777999999999999999986 22333445668999999999999655589999999
Q ss_pred CcEEEEeCCCCCCCCcccceeeeecCCccEeeEEEecCCCcEEEEEeCCCeEEEEEcCCCCCCCCeeeeeccCCCeeEEE
Q 014454 201 AQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLA 280 (424)
Q Consensus 201 g~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~v~ 280 (424)
|+|++||+++.. +........+...+.+++|+|++. +|++|+.||.|++||++... +..+.+|...|++++
T Consensus 187 ~~v~iwd~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~-~l~~g~~dg~i~~wd~~~~~----~~~~~~h~~~v~~v~ 257 (435)
T 4e54_B 187 GTTRLQDFKGNI----LRVFASSDTINIWFCSLDVSASSR-MVVTGDNVGNVILLNMDGKE----LWNLRMHKKKVTHVA 257 (435)
T ss_dssp SCEEEEETTSCE----EEEEECCSSCSCCCCCEEEETTTT-EEEEECSSSBEEEEESSSCB----CCCSBCCSSCEEEEE
T ss_pred CEEEEeeccCCc----eeEEeccCCCCccEEEEEECCCCC-EEEEEeCCCcEeeeccCcce----eEEEecccceEEeee
Confidence 999999997541 111222223445688999999986 66799999999999997533 456678999999999
Q ss_pred ecCCCCeEEEEEeCCCcEEEEECCCCCC--cceEecCCCCCEEEEEEcCCCCcEEEEEECCCeEEEeeCCCCCcccCCCC
Q 014454 281 FNPFNEWILATGSTDKTVKLFDLRKIST--ALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPED 358 (424)
Q Consensus 281 ~~~~~~~~l~tg~~dg~i~iwd~~~~~~--~~~~~~~h~~~v~~~~~sp~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~ 358 (424)
|+|++..+|++|+.|+.|++||+++... .+....+|...|++++|+|++. +|++++.||.|+|||++.+........
T Consensus 258 ~~p~~~~~~~s~s~d~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~spdg~-~l~s~~~D~~i~iwd~~~~~~~~~~~~ 336 (435)
T 4e54_B 258 LNPCCDWFLATASVDQTVKIWDLRQVRGKASFLYSLPHRHPVNAACFSPDGA-RLLTTDQKSEIRVYSASQWDCPLGLIP 336 (435)
T ss_dssp ECTTCSSEEEEEETTSBCCEEETTTCCSSSCCSBCCBCSSCEEECCBCTTSS-EEEEEESSSCEEEEESSSSSSEEEECC
T ss_pred ecCCCceEEEEecCcceeeEEecccccccceEEEeeeccccccceeECCCCC-eeEEEcCCCEEEEEECCCCccceEEec
Confidence 9999988899999999999999987432 2333467999999999999996 799999999999999987543210000
Q ss_pred ---------------------------cC----------C---------CCCeeeEE-EcCCCCCcceE-EeCCCCCcEE
Q 014454 359 ---------------------------AE----------D---------GPPELLFI-HGGHTSKISDF-SWNPCEDWVI 390 (424)
Q Consensus 359 ---------------------------~~----------~---------~~~~~~~~-~~~h~~~v~~~-~~~~~~~~~l 390 (424)
.. + ....++.. ..+|...|.++ +|+|++. +|
T Consensus 337 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~i~iwd~~~g~~~~~l~~~~~~~v~s~~~fspdg~-~l 415 (435)
T 4e54_B 337 HPHRHFQHLTPIKAAWHPRYNLIVVGRYPDPNFKSCTPYELRTIDVFDGNSGKMMCQLYDPESSGISSLNEFNPMGD-TL 415 (435)
T ss_dssp CCCCCCSSSCCCBCEECSSSSCEEEECCCCTTSCCSSTTCCCCEEEECSSSCCEEEEECCSSCCCCCCEEEECTTSS-CE
T ss_pred ccccccccceeEEEEEcCCCCEEEEEEcCCCCeEEEEecCCCEEEEEECCCCcEEEEEeCCCCCcEEEEEEECCCCC-EE
Confidence 00 0 01122223 24677788887 6999999 57
Q ss_pred EEEeCCCcEEEEecCCccC
Q 014454 391 SSVAEDNILQIWQMAENIY 409 (424)
Q Consensus 391 ~s~~~dg~i~vw~~~~~~~ 409 (424)
++|+ |+.|+||++.++..
T Consensus 416 asg~-d~~i~iW~~~~gk~ 433 (435)
T 4e54_B 416 ASAM-GYHILIWSQQEART 433 (435)
T ss_dssp EEEC-SSEEEECCCC----
T ss_pred EEEc-CCcEEEEECCcCee
Confidence 7765 88999999988754
No 33
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.9e-38 Score=297.93 Aligned_cols=337 Identities=14% Similarity=0.253 Sum_probs=243.4
Q ss_pred HHhHHhcChhHHHHhhhcCCCCCccEEEEccCCCCCCCCCCceEEEEEeecCCCCCCCeEEEEEEECCCCCCCcccCCCC
Q 014454 21 YKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEPPGKDYSVQKMILGTHTSENEPNYLMLAQVQLPLDDSENDARHYD 100 (424)
Q Consensus 21 ~~~wk~~~~~~y~~~~~~~~~~p~~~~~~~p~~~~~~~~~~~~~~~~~gt~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~ 100 (424)
.++|..........+......-+..++.|.|+. ..++.|+ .+..++++.+.-.
T Consensus 47 v~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~----------~~l~~~~-----~dg~v~vw~~~~~------------ 99 (416)
T 2pm9_A 47 LELWSLLAADSEKPIASLQVDSKFNDLDWSHNN----------KIIAGAL-----DNGSLELYSTNEA------------ 99 (416)
T ss_dssp CEEEESSSGGGCSCSCCCCCSSCEEEEEECSSS----------SCEEEEE-----SSSCEEEECCSST------------
T ss_pred EEEEEccCCCCCcEEEEEecCCceEEEEECCCC----------CeEEEEc-----cCCeEEEeecccc------------
Confidence 455544433222223333344567788998865 3455555 2346777655211
Q ss_pred CcCCCCCCCCCCCCcEEEEEEeccCCceeEEEecCCCCcEEEEEeCCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCc
Q 014454 101 DDRSDFGGFGCANGKVQIIQQINHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTE 180 (424)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~latg~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~h~~~ 180 (424)
..+.-.+.....|.+.|++++|+|++..+|++|+.||.|++||+.......... .......+.+|...
T Consensus 100 -----------~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~-~~~~~~~~~~~~~~ 167 (416)
T 2pm9_A 100 -----------NNAINSMARFSNHSSSVKTVKFNAKQDNVLASGGNNGEIFIWDMNKCTESPSNY-TPLTPGQSMSSVDE 167 (416)
T ss_dssp -----------TSCCCEEEECCCSSSCCCEEEECSSSTTBEEEECSSSCEEBCBTTTTSSCTTTC-CCBCCCCSCCSSCC
T ss_pred -----------cccccchhhccCCccceEEEEEcCCCCCEEEEEcCCCeEEEEECCCCccccccc-cccccccccCCCCC
Confidence 001112334457999999999999855689999999999999998732110000 01111234679999
Q ss_pred eeEEEecCCCCceEEEEeCCCcEEEEeCCCCCCCCcccceeeeecC------CccEeeEEEecCCCcEEEEEeCCC---e
Q 014454 181 GYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVH------EGVVEDVAWHLRHEYLFGSVGDDQ---Y 251 (424)
Q Consensus 181 v~~l~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~------~~~v~~~~~~~~~~~~~~s~~~dg---~ 251 (424)
|.+++|+|++..+|++++.||.|++||+++.. .+..+..+ ...|.+++|+|++..++++++.|+ .
T Consensus 168 v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~------~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~ 241 (416)
T 2pm9_A 168 VISLAWNQSLAHVFASAGSSNFASIWDLKAKK------EVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDNDPS 241 (416)
T ss_dssp CCEEEECSSCTTEEEEESSSSCEEEEETTTTE------EEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSSCC
T ss_pred eeEEEeCCCCCcEEEEEcCCCCEEEEECCCCC------cceEEeccccccccCCceEEEEECCCCCCEEEEEECCCCCce
Confidence 99999999866689999999999999998763 23334444 789999999999877888999998 9
Q ss_pred EEEEEcCCCCCCCCeeeee-ccCCCeeEEEecC-CCCeEEEEEeCCCcEEEEECCCCCCcceEecCCCCCEEEEEEcCCC
Q 014454 252 LLIWDLRTPSVSKPVQSVV-AHQSEVNCLAFNP-FNEWILATGSTDKTVKLFDLRKISTALHTFDSHKEEVFQVGWNPKN 329 (424)
Q Consensus 252 i~i~d~~~~~~~~~~~~~~-~~~~~v~~v~~~~-~~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~~h~~~v~~~~~sp~~ 329 (424)
|++||+++... ++..+. .|...|++++|+| ++. +|++++.||.|++||+++ ++++..+..|...|.+++|+|++
T Consensus 242 i~~~d~~~~~~--~~~~~~~~~~~~v~~~~~s~~~~~-~l~s~~~dg~v~~wd~~~-~~~~~~~~~~~~~v~~~~~s~~~ 317 (416)
T 2pm9_A 242 ILIWDLRNANT--PLQTLNQGHQKGILSLDWCHQDEH-LLLSSGRDNTVLLWNPES-AEQLSQFPARGNWCFKTKFAPEA 317 (416)
T ss_dssp CCEEETTSTTS--CSBCCCSCCSSCEEEEEECSSCSS-CEEEEESSSEEEEECSSS-CCEEEEEECSSSCCCCEEECTTC
T ss_pred EEEEeCCCCCC--CcEEeecCccCceeEEEeCCCCCC-eEEEEeCCCCEEEeeCCC-CccceeecCCCCceEEEEECCCC
Confidence 99999998642 455666 7999999999999 665 799999999999999998 68889999999999999999998
Q ss_pred CcEEEEEECCCeEEEeeCCCCCcccCCCC---cCCCCCeeeEEEcC------------------CCCCcceEEeCCCCCc
Q 014454 330 ETILASCCLGRRLMVWDLSRIDEEQTPED---AEDGPPELLFIHGG------------------HTSKISDFSWNPCEDW 388 (424)
Q Consensus 330 ~~~l~s~~~dg~i~iwd~~~~~~~~~~~~---~~~~~~~~~~~~~~------------------h~~~v~~~~~~~~~~~ 388 (424)
+.+|++++.|+.|+||++........... ....++..++...+ |...+..++|+|+|+
T Consensus 318 ~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~- 396 (416)
T 2pm9_A 318 PDLFACASFDNKIEVQTLQNLTNTLDEQETETKQQESETDFWNNVSREESKEKPSVFHLQAPTWYGEPSPAAHWAFGGK- 396 (416)
T ss_dssp TTEEEECCSSSEEEEEESCCCCCSSCC----------------------CCSCCCSSCCCCCSTTCCCSCCCEEETTTE-
T ss_pred CCEEEEEecCCcEEEEEccCCCCCcccccccccccCCcccccccccccccccccccccccCCccccCCccceEEeeCCe-
Confidence 66899999999999999988765443211 11112222233222 677888999999999
Q ss_pred EEEEEeCCCcEEEEecCCc
Q 014454 389 VISSVAEDNILQIWQMAEN 407 (424)
Q Consensus 389 ~l~s~~~dg~i~vw~~~~~ 407 (424)
+|++++.|+.|+||++.++
T Consensus 397 ~la~~~~d~~v~~w~~~~~ 415 (416)
T 2pm9_A 397 LVQITPDGKGVSITNPKIS 415 (416)
T ss_dssp EECBCTTSSCBCCBCCCCC
T ss_pred EEEEeCCCCeEEEEEeccC
Confidence 7999999999999999864
No 34
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=1.9e-36 Score=283.50 Aligned_cols=263 Identities=20% Similarity=0.327 Sum_probs=207.2
Q ss_pred EEEEEEeccCCceeEEEecCCCCcEEEEEeCCCeEEEEeCCCCCCCCCCCCCCCCcEEEecC------------------
Q 014454 116 VQIIQQINHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGH------------------ 177 (424)
Q Consensus 116 ~~~~~~~~h~~~v~~~~~~p~~~~~latg~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~h------------------ 177 (424)
.++.+.+.|.+.|++++|+|++. +||+|+ ++.++||++... .....+..|
T Consensus 55 ~~~~~~~~h~~~V~~v~fspdg~-~la~g~-~~~v~i~~~~~g----------~~~~~l~~~~~~~~~~~~~~~~~~~~~ 122 (393)
T 1erj_A 55 VELHKSLDHTSVVCCVKFSNDGE-YLATGC-NKTTQVYRVSDG----------SLVARLSDDSAANKDPENLNTSSSPSS 122 (393)
T ss_dssp EEEEEEEECSSCCCEEEECTTSS-EEEEEC-BSCEEEEETTTC----------CEEEEECC-----------------CC
T ss_pred ceeEEecCCCCEEEEEEECCCCC-EEEEEc-CCcEEEEEecCC----------CEEEEecCccccccccccccccccCCC
Confidence 44566678999999999999997 788876 689999998762 222333322
Q ss_pred CCceeEEEecCCCCceEEEEeCCCcEEEEeCCCCCCCCcccceeeeecCCccEeeEEEecCCCcEEEEEeCCCeEEEEEc
Q 014454 178 STEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDL 257 (424)
Q Consensus 178 ~~~v~~l~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~dg~i~i~d~ 257 (424)
...|.+++|+|++. +|++|+.||.|++||+.++ +.+..+.+|...|.+++|+|++. .|++++.|+.|++||+
T Consensus 123 ~~~v~~v~~s~dg~-~l~s~~~d~~i~iwd~~~~------~~~~~~~~h~~~v~~~~~~p~~~-~l~s~s~d~~v~iwd~ 194 (393)
T 1erj_A 123 DLYIRSVCFSPDGK-FLATGAEDRLIRIWDIENR------KIVMILQGHEQDIYSLDYFPSGD-KLVSGSGDRTVRIWDL 194 (393)
T ss_dssp CCBEEEEEECTTSS-EEEEEETTSCEEEEETTTT------EEEEEECCCSSCEEEEEECTTSS-EEEEEETTSEEEEEET
T ss_pred ceeEEEEEECCCCC-EEEEEcCCCeEEEEECCCC------cEEEEEccCCCCEEEEEEcCCCC-EEEEecCCCcEEEEEC
Confidence 23589999999988 7999999999999999765 34566788999999999999987 4569999999999999
Q ss_pred CCCCCCCCeeeeeccCCCeeEEEecC-CCCeEEEEEeCCCcEEEEECCCCCCcceEe-------cCCCCCEEEEEEcCCC
Q 014454 258 RTPSVSKPVQSVVAHQSEVNCLAFNP-FNEWILATGSTDKTVKLFDLRKISTALHTF-------DSHKEEVFQVGWNPKN 329 (424)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~v~~v~~~~-~~~~~l~tg~~dg~i~iwd~~~~~~~~~~~-------~~h~~~v~~~~~sp~~ 329 (424)
+++.. ...+ .+...+.+++|+| ++. +|++|+.||.|++||+++ +..+..+ .+|...|.+++|+|++
T Consensus 195 ~~~~~---~~~~-~~~~~v~~~~~~~~~~~-~l~~~s~d~~v~iwd~~~-~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g 268 (393)
T 1erj_A 195 RTGQC---SLTL-SIEDGVTTVAVSPGDGK-YIAAGSLDRAVRVWDSET-GFLVERLDSENESGTGHKDSVYSVVFTRDG 268 (393)
T ss_dssp TTTEE---EEEE-ECSSCEEEEEECSTTCC-EEEEEETTSCEEEEETTT-CCEEEEEC------CCCSSCEEEEEECTTS
T ss_pred CCCee---EEEE-EcCCCcEEEEEECCCCC-EEEEEcCCCcEEEEECCC-CcEEEeecccccCCCCCCCCEEEEEECCCC
Confidence 98653 3333 3567899999999 555 799999999999999997 5555555 5789999999999999
Q ss_pred CcEEEEEECCCeEEEeeCCCCCcccCCCCcCCCCCeeeEEEcCCCCCcceEEeCCCCCcEEEEEeCCCcEEEEecCCcc
Q 014454 330 ETILASCCLGRRLMVWDLSRIDEEQTPEDAEDGPPELLFIHGGHTSKISDFSWNPCEDWVISSVAEDNILQIWQMAENI 408 (424)
Q Consensus 330 ~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~ 408 (424)
. +|++++.|+.|++||++.......... .....+...+.+|...|.+++|+|++. +|++++.|+.|++||+.++.
T Consensus 269 ~-~l~s~s~d~~v~~wd~~~~~~~~~~~~--~~~~~~~~~~~~h~~~v~~~~~~~~~~-~l~sgs~D~~v~iwd~~~~~ 343 (393)
T 1erj_A 269 Q-SVVSGSLDRSVKLWNLQNANNKSDSKT--PNSGTCEVTYIGHKDFVLSVATTQNDE-YILSGSKDRGVLFWDKKSGN 343 (393)
T ss_dssp S-EEEEEETTSEEEEEEC-----------------CEEEEEECCSSCEEEEEECGGGC-EEEEEETTSEEEEEETTTCC
T ss_pred C-EEEEEeCCCEEEEEECCCCCCcccccC--CCCCcceEEEecccCcEEEEEECCCCC-EEEEEeCCCeEEEEECCCCe
Confidence 6 799999999999999987543221110 011245667789999999999999999 68999999999999998764
No 35
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=1.8e-36 Score=283.68 Aligned_cols=245 Identities=22% Similarity=0.358 Sum_probs=205.9
Q ss_pred ccCCceeEEEecCCCCcEEEEEeCCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCceeEEEecCCCCceEEEEeCCCc
Q 014454 123 NHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDDAQ 202 (424)
Q Consensus 123 ~h~~~v~~~~~~p~~~~~latg~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~ 202 (424)
.+...|++++|+|++. +||+|+.||.|+|||+.+ ......+.+|...|.+++|+|++. +|++|+.|++
T Consensus 121 ~~~~~v~~v~~s~dg~-~l~s~~~d~~i~iwd~~~----------~~~~~~~~~h~~~v~~~~~~p~~~-~l~s~s~d~~ 188 (393)
T 1erj_A 121 SSDLYIRSVCFSPDGK-FLATGAEDRLIRIWDIEN----------RKIVMILQGHEQDIYSLDYFPSGD-KLVSGSGDRT 188 (393)
T ss_dssp CCCCBEEEEEECTTSS-EEEEEETTSCEEEEETTT----------TEEEEEECCCSSCEEEEEECTTSS-EEEEEETTSE
T ss_pred CCceeEEEEEECCCCC-EEEEEcCCCeEEEEECCC----------CcEEEEEccCCCCEEEEEEcCCCC-EEEEecCCCc
Confidence 3555799999999986 899999999999999987 455677889999999999999887 7999999999
Q ss_pred EEEEeCCCCCCCCcccceeeeecCCccEeeEEEecCCCcEEEEEeCCCeEEEEEcCCCCCCCCeeee-------eccCCC
Q 014454 203 ICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSV-------VAHQSE 275 (424)
Q Consensus 203 i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~dg~i~i~d~~~~~~~~~~~~~-------~~~~~~ 275 (424)
|++||++++. ....+. +...+.+++|+|.+..+|++|+.||.|++||++++.. +..+ .+|...
T Consensus 189 v~iwd~~~~~------~~~~~~-~~~~v~~~~~~~~~~~~l~~~s~d~~v~iwd~~~~~~---~~~~~~~~~~~~~h~~~ 258 (393)
T 1erj_A 189 VRIWDLRTGQ------CSLTLS-IEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFL---VERLDSENESGTGHKDS 258 (393)
T ss_dssp EEEEETTTTE------EEEEEE-CSSCEEEEEECSTTCCEEEEEETTSCEEEEETTTCCE---EEEEC------CCCSSC
T ss_pred EEEEECCCCe------eEEEEE-cCCCcEEEEEECCCCCEEEEEcCCCcEEEEECCCCcE---EEeecccccCCCCCCCC
Confidence 9999998763 223333 5678999999995455778999999999999988653 3333 568899
Q ss_pred eeEEEecCCCCeEEEEEeCCCcEEEEECCCCC-----------CcceEecCCCCCEEEEEEcCCCCcEEEEEECCCeEEE
Q 014454 276 VNCLAFNPFNEWILATGSTDKTVKLFDLRKIS-----------TALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMV 344 (424)
Q Consensus 276 v~~v~~~~~~~~~l~tg~~dg~i~iwd~~~~~-----------~~~~~~~~h~~~v~~~~~sp~~~~~l~s~~~dg~i~i 344 (424)
|++++|+|++. +|++|+.|+.|++||++... .+...+.+|...|.+++|+|++. +|++|+.|+.|++
T Consensus 259 v~~v~~~~~g~-~l~s~s~d~~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~-~l~sgs~D~~v~i 336 (393)
T 1erj_A 259 VYSVVFTRDGQ-SVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDE-YILSGSKDRGVLF 336 (393)
T ss_dssp EEEEEECTTSS-EEEEEETTSEEEEEEC---------------CEEEEEECCSSCEEEEEECGGGC-EEEEEETTSEEEE
T ss_pred EEEEEECCCCC-EEEEEeCCCEEEEEECCCCCCcccccCCCCCcceEEEecccCcEEEEEECCCCC-EEEEEeCCCeEEE
Confidence 99999999998 69999999999999998632 23556778999999999999996 7999999999999
Q ss_pred eeCCCCCcccCCCCcCCCCCeeeEEEcCCCCCcceEEeCC------CCCcEEEEEeCCCcEEEEecCC
Q 014454 345 WDLSRIDEEQTPEDAEDGPPELLFIHGGHTSKISDFSWNP------CEDWVISSVAEDNILQIWQMAE 406 (424)
Q Consensus 345 wd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~------~~~~~l~s~~~dg~i~vw~~~~ 406 (424)
||+..+ ..+..+.+|...|.+++|++ ++. +|+||+.||.|+||++..
T Consensus 337 wd~~~~--------------~~~~~l~~h~~~v~~v~~~~~~~~~p~~~-~l~sgs~Dg~i~iW~~~~ 389 (393)
T 1erj_A 337 WDKKSG--------------NPLLMLQGHRNSVISVAVANGSSLGPEYN-VFATGSGDCKARIWKYKK 389 (393)
T ss_dssp EETTTC--------------CEEEEEECCSSCEEEEEECSSCTTCTTCE-EEEEEETTSEEEEEEEEE
T ss_pred EECCCC--------------eEEEEECCCCCCEEEEEecCCcCcCCCCC-EEEEECCCCcEEECcccc
Confidence 999875 45677889999999999986 566 799999999999999864
No 36
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=100.00 E-value=1.1e-35 Score=292.50 Aligned_cols=239 Identities=26% Similarity=0.445 Sum_probs=210.9
Q ss_pred EEeccCCceeEEEecCCCCcEEEEEeCCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCceeEEEecCCCCceEEEEeC
Q 014454 120 QQINHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSD 199 (424)
Q Consensus 120 ~~~~h~~~v~~~~~~p~~~~~latg~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~ 199 (424)
....|...|.+++|+|++. +||+|+.||.|++|+... .....+.+|...|.+++|+|++. +|++++.
T Consensus 339 ~~~~~~~~v~~~~~s~~g~-~l~~~~~dg~v~~~~~~~-----------~~~~~~~~~~~~v~~~~~s~dg~-~l~~~~~ 405 (577)
T 2ymu_A 339 TLTGHSSSVWGVAFSPDGQ-TIASASDDKTVKLWNRNG-----------QLLQTLTGHSSSVRGVAFSPDGQ-TIASASD 405 (577)
T ss_dssp EECCCSSCEEEEEECTTSS-EEEEEETTSEEEEEETTC-----------CEEEEEECCSSCEEEEEECTTSS-CEEEEET
T ss_pred EEeCCCCCEEEEEECCCCC-EEEEEeCCCEEEEEcCCC-----------CEEEEecCCCCCeEEEEECCCCC-EEEEEeC
Confidence 3457899999999999986 899999999999999654 45677889999999999999988 7999999
Q ss_pred CCcEEEEeCCCCCCCCcccceeeeecCCccEeeEEEecCCCcEEEEEeCCCeEEEEEcCCCCCCCCeeeeeccCCCeeEE
Q 014454 200 DAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCL 279 (424)
Q Consensus 200 dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~v 279 (424)
|+.|++||... +.+..+.+|...|++++|+|++. ++++++.|+.|++||+.. +.+..+..|...|+++
T Consensus 406 d~~v~~~~~~~-------~~~~~~~~~~~~v~~~~~s~d~~-~l~~~~~d~~v~~w~~~~----~~~~~~~~~~~~v~~~ 473 (577)
T 2ymu_A 406 DKTVKLWNRNG-------QLLQTLTGHSSSVWGVAFSPDDQ-TIASASDDKTVKLWNRNG----QLLQTLTGHSSSVRGV 473 (577)
T ss_dssp TSEEEEECTTC-------CEEEEEECCSSCEEEEEECTTSS-EEEEEETTSEEEEEETTS----CEEEEEECCSSCEEEE
T ss_pred CCEEEEEeCCC-------CEEEEecCCCCCeEEEEECCCCC-EEEEEcCCCEEEEEECCC----CEEEEEcCCCCCEEEE
Confidence 99999999643 24566788999999999999986 567999999999999743 2367778899999999
Q ss_pred EecCCCCeEEEEEeCCCcEEEEECCCCCCcceEecCCCCCEEEEEEcCCCCcEEEEEECCCeEEEeeCCCCCcccCCCCc
Q 014454 280 AFNPFNEWILATGSTDKTVKLFDLRKISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPEDA 359 (424)
Q Consensus 280 ~~~~~~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~ 359 (424)
+|+|++. +|++++.|+.|++||.. ++++..+.+|...|++++|+|+++ +|++++.||.|+|||...
T Consensus 474 ~~spd~~-~las~~~d~~i~iw~~~--~~~~~~~~~h~~~v~~l~~s~dg~-~l~s~~~dg~v~lwd~~~---------- 539 (577)
T 2ymu_A 474 AFSPDGQ-TIASASDDKTVKLWNRN--GQLLQTLTGHSSSVRGVAFSPDGQ-TIASASDDKTVKLWNRNG---------- 539 (577)
T ss_dssp EECTTSC-EEEEEETTSEEEEEETT--SCEEEEEECCSSCEEEEEECTTSS-CEEEEETTSEEEEECTTS----------
T ss_pred EEcCCCC-EEEEEeCCCEEEEEcCC--CCEEEEEeCCCCCEEEEEEcCCCC-EEEEEECcCEEEEEeCCC----------
Confidence 9999998 69999999999999964 578899999999999999999996 799999999999999642
Q ss_pred CCCCCeeeEEEcCCCCCcceEEeCCCCCcEEEEEeCCCcEEEEe
Q 014454 360 EDGPPELLFIHGGHTSKISDFSWNPCEDWVISSVAEDNILQIWQ 403 (424)
Q Consensus 360 ~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~vw~ 403 (424)
+++..+.+|...|++++|+|+++ +|+|++.|++|++||
T Consensus 540 -----~~~~~~~~h~~~v~~~~fs~dg~-~l~s~~~D~~i~~Wd 577 (577)
T 2ymu_A 540 -----QLLQTLTGHSSSVWGVAFSPDGQ-TIASASSDKTVKLWN 577 (577)
T ss_dssp -----CEEEEEECCSSCEEEEEECTTSS-CEEEEETTSCEEEEC
T ss_pred -----CEEEEEcCCCCCEEEEEEcCCCC-EEEEEeCCCEEEEeC
Confidence 56778899999999999999999 588999999999997
No 37
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=100.00 E-value=2.6e-36 Score=279.20 Aligned_cols=251 Identities=19% Similarity=0.287 Sum_probs=206.1
Q ss_pred ccCCceeEEEecCCCC---cEEEEEeCCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCceeEEEecC-CCCceEEEEe
Q 014454 123 NHDGEVNRARYMPQNP---FLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSK-FKEGHLLSGS 198 (424)
Q Consensus 123 ~h~~~v~~~~~~p~~~---~~latg~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~-~~~~~l~s~~ 198 (424)
.|.+.|++++|+|++. .+|++|+.||.|++||+.+ ......+.+|...|.+++|+| ++. +|++|+
T Consensus 67 ~~~~~v~~~~~~~~~~~~~~~l~~~~~dg~i~v~d~~~----------~~~~~~~~~~~~~i~~~~~~~~~~~-~l~s~~ 135 (366)
T 3k26_A 67 DADENFYTCAWTYDSNTSHPLLAVAGSRGIIRIINPIT----------MQCIKHYVGHGNAINELKFHPRDPN-LLLSVS 135 (366)
T ss_dssp CTTCCEEEEEEEECTTTCCEEEEEEETTCEEEEECTTT----------CCEEEEEESCCSCEEEEEECSSCTT-EEEEEE
T ss_pred CCCCcEEEEEeccCCCCCCCEEEEecCCCEEEEEEchh----------ceEeeeecCCCCcEEEEEECCCCCC-EEEEEe
Confidence 3789999999999832 4899999999999999987 456778889999999999999 555 899999
Q ss_pred CCCcEEEEeCCCCCCCCcccceeee---ecCCccEeeEEEecCCCcEEEEEeCCCeEEEEEcCCCCCC------------
Q 014454 199 DDAQICLWDINAAPKNKSLEAMQIF---KVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVS------------ 263 (424)
Q Consensus 199 ~dg~i~iwd~~~~~~~~~~~~~~~~---~~~~~~v~~~~~~~~~~~~~~s~~~dg~i~i~d~~~~~~~------------ 263 (424)
.||.|++||++++. .+..+ ..|...|.+++|+|++. .|++++.||.|++||++++...
T Consensus 136 ~dg~i~iwd~~~~~------~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~ 208 (366)
T 3k26_A 136 KDHALRLWNIQTDT------LVAIFGGVEGHRDEVLSADYDLLGE-KIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPN 208 (366)
T ss_dssp TTSCEEEEETTTTE------EEEEECSTTSCSSCEEEEEECTTSS-EEEEEETTSCEEEEESCSHHHHHHHHHHHTCCGG
T ss_pred CCCeEEEEEeecCe------EEEEecccccccCceeEEEECCCCC-EEEEecCCCCEEEEECCCCccccccceeEEecCC
Confidence 99999999998662 33344 57999999999999886 5669999999999999875321
Q ss_pred -------------CCeeeeeccCCCeeEEEecCCCCeEEEEEeCCCcEEEEECCCCCC-------------cceEecCCC
Q 014454 264 -------------KPVQSVVAHQSEVNCLAFNPFNEWILATGSTDKTVKLFDLRKIST-------------ALHTFDSHK 317 (424)
Q Consensus 264 -------------~~~~~~~~~~~~v~~v~~~~~~~~~l~tg~~dg~i~iwd~~~~~~-------------~~~~~~~h~ 317 (424)
........|...|.+++|+ +. +|++++.||.|++||+++... .+..+..|.
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~-~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (366)
T 3k26_A 209 KTNRPFISQKIHFPDFSTRDIHRNYVDCVRWL--GD-LILSKSCENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQ 285 (366)
T ss_dssp GCSSCCCCEEECCCSEEECSSCSSCCCEEEEE--TT-EEEEECSSSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSS
T ss_pred CCcccccceeeccCccccccCCcceEEEEEEc--CC-EEEEEecCCEEEEEeCCCccccccccccCCcchheeccccccC
Confidence 0112223489999999999 55 799999999999999987432 367778899
Q ss_pred CCEEEEEEcCC--CCcEEEEEECCCeEEEeeCCCCCcccCCCCcCCCCCeeeEEEcCC--CCCcceEEeCCCCCcEEEEE
Q 014454 318 EEVFQVGWNPK--NETILASCCLGRRLMVWDLSRIDEEQTPEDAEDGPPELLFIHGGH--TSKISDFSWNPCEDWVISSV 393 (424)
Q Consensus 318 ~~v~~~~~sp~--~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h--~~~v~~~~~~~~~~~~l~s~ 393 (424)
..|++++|+|+ +. +|++++.||.|++||+..+.... .....+.+| ...|++++|+|+++ +|+++
T Consensus 286 ~~v~~~~~s~~~~~~-~l~~~~~dg~i~vwd~~~~~~~~----------~~~~~~~~~~~~~~v~~~~~s~~~~-~l~s~ 353 (366)
T 3k26_A 286 CDIWYMRFSMDFWQK-MLALGNQVGKLYVWDLEVEDPHK----------AKCTTLTHHKCGAAIRQTSFSRDSS-ILIAV 353 (366)
T ss_dssp CCSSCCCCEECTTSS-EEEEECTTSCEEEEECCSSSGGG----------CEEEEECCTTCCSCEEEEEECTTSS-EEEEE
T ss_pred CcEEEEEEcCCCCCc-EEEEEecCCcEEEEECCCCCCcc----------ccceEEcccccCCceEEEEeCCCCC-eEEEE
Confidence 99999999999 75 89999999999999998764321 244566777 78999999999999 79999
Q ss_pred eCCCcEEEEecCC
Q 014454 394 AEDNILQIWQMAE 406 (424)
Q Consensus 394 ~~dg~i~vw~~~~ 406 (424)
+.||.|++||+.+
T Consensus 354 ~~dg~i~iwd~~~ 366 (366)
T 3k26_A 354 CDDASIWRWDRLR 366 (366)
T ss_dssp ETTSEEEEEEC--
T ss_pred eCCCEEEEEEecC
Confidence 9999999999863
No 38
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=1.1e-35 Score=273.37 Aligned_cols=257 Identities=18% Similarity=0.272 Sum_probs=203.3
Q ss_pred EeccCCceeEEEe-----cC-CCCcEEEEEeCCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCceeEEEecCCCCceE
Q 014454 121 QINHDGEVNRARY-----MP-QNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHL 194 (424)
Q Consensus 121 ~~~h~~~v~~~~~-----~p-~~~~~latg~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l 194 (424)
..+|.+.|++++| ++ +++ +||+|+.|++|+|||+....... ....+...+.+|...|.+++|+|++. +|
T Consensus 17 l~gH~~~V~~~~~~~s~~~~~d~~-~l~sgs~D~~v~iWd~~~~~~~~---~~~~~~~~l~~h~~~V~~~~~~~~~~-~l 91 (343)
T 2xzm_R 17 LEGHSDWVTSIVAGFSQKENEDSP-VLISGSRDKTVMIWKLYEEEQNG---YFGIPHKALTGHNHFVSDLALSQENC-FA 91 (343)
T ss_dssp EECCSSCEEEEEECCCSSTTCCCC-EEEEEETTSCEEEEEECSSCCSS---BSEEEEEEECCCSSCEEEEEECSSTT-EE
T ss_pred eccchhhhhheeeEEEeecCCCCC-EEEEEcCCCEEEEEECCcCCccc---ccccccchhccCCCceEEEEECCCCC-EE
Confidence 3479999999999 76 554 89999999999999987521110 01234567889999999999999887 79
Q ss_pred EEEeCCCcEEEEeCCCCCCCCcccceeeeecCCccEeeEEEecCCCcEEEEEeCCCeEEEEEcCCCCCCCCeeeeeccCC
Q 014454 195 LSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQS 274 (424)
Q Consensus 195 ~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~ 274 (424)
++|+.|++|++||++++ ..+..+.+|...|.+++|+|++. .|++++.|+.|++||++.... ........|..
T Consensus 92 ~s~s~D~~v~lwd~~~~------~~~~~~~~h~~~v~~v~~sp~~~-~l~s~~~d~~i~~wd~~~~~~-~~~~~~~~~~~ 163 (343)
T 2xzm_R 92 ISSSWDKTLRLWDLRTG------TTYKRFVGHQSEVYSVAFSPDNR-QILSAGAEREIKLWNILGECK-FSSAEKENHSD 163 (343)
T ss_dssp EEEETTSEEEEEETTSS------CEEEEEECCCSCEEEEEECSSTT-EEEEEETTSCEEEEESSSCEE-EECCTTTSCSS
T ss_pred EEEcCCCcEEEEECCCC------cEEEEEcCCCCcEEEEEECCCCC-EEEEEcCCCEEEEEeccCCce-eeeecccCCCc
Confidence 99999999999999876 34566788999999999999987 556999999999999974221 00111136888
Q ss_pred CeeEEEecCCCC---------eEEEEEeCCCcEEEEECCCCCCcceEecCCCCCEEEEEEcCCCCcEEEEEECCCeEEEe
Q 014454 275 EVNCLAFNPFNE---------WILATGSTDKTVKLFDLRKISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVW 345 (424)
Q Consensus 275 ~v~~v~~~~~~~---------~~l~tg~~dg~i~iwd~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~l~s~~~dg~i~iw 345 (424)
.|.+++|+|++. .+|++|+.||.|++||.+ ......+.+|...|.+++|+|++. +|++|+.||.|+||
T Consensus 164 ~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~--~~~~~~~~~h~~~v~~~~~s~~g~-~l~sgs~dg~v~iw 240 (343)
T 2xzm_R 164 WVSCVRYSPIMKSANKVQPFAPYFASVGWDGRLKVWNTN--FQIRYTFKAHESNVNHLSISPNGK-YIATGGKDKKLLIW 240 (343)
T ss_dssp CEEEEEECCCCCSCSCCCSSCCEEEEEETTSEEEEEETT--TEEEEEEECCSSCEEEEEECTTSS-EEEEEETTCEEEEE
T ss_pred eeeeeeeccccccccccCCCCCEEEEEcCCCEEEEEcCC--CceeEEEcCccccceEEEECCCCC-EEEEEcCCCeEEEE
Confidence 999999999862 379999999999999954 467778889999999999999996 79999999999999
Q ss_pred eCCCCCcccCCCCcCCCCCeeeEEEcCCCCCcceEEeCCCCCcEEEEEeCCCcEEEEecCCccC
Q 014454 346 DLSRIDEEQTPEDAEDGPPELLFIHGGHTSKISDFSWNPCEDWVISSVAEDNILQIWQMAENIY 409 (424)
Q Consensus 346 d~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~ 409 (424)
|+..... ....+ .+...|.+++|+|++. ++++ +.|+.|++|++.++..
T Consensus 241 d~~~~~~-------------~~~~~-~~~~~v~~v~~sp~~~-~la~-~~d~~v~iw~~~~~~~ 288 (343)
T 2xzm_R 241 DILNLTY-------------PQREF-DAGSTINQIAFNPKLQ-WVAV-GTDQGVKIFNLMTQSK 288 (343)
T ss_dssp ESSCCSS-------------CSEEE-ECSSCEEEEEECSSSC-EEEE-EESSCEEEEESSSCCS
T ss_pred ECCCCcc-------------cceee-cCCCcEEEEEECCCCC-EEEE-ECCCCEEEEEeCCCCC
Confidence 9954321 12222 2344699999999998 5655 5588899999987643
No 39
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=100.00 E-value=8.9e-36 Score=299.39 Aligned_cols=269 Identities=21% Similarity=0.274 Sum_probs=211.6
Q ss_pred EeccCCceeEEEecCCCCcEEEEEeCCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCceeEEEecCCCCceEEEEeCC
Q 014454 121 QINHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDD 200 (424)
Q Consensus 121 ~~~h~~~v~~~~~~p~~~~~latg~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~d 200 (424)
..+|.+.|++++|+|++..+|++|+.||+|+||++...... .......+.+|...|.+++|+|++. +|++|+.|
T Consensus 378 l~~H~~~V~~v~~~~~~~~~l~s~s~D~~i~~W~~~~~~~~-----~~~~~~~~~~h~~~v~~v~~s~~g~-~l~sgs~D 451 (694)
T 3dm0_A 378 MRAHTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKA-----YGVAQRRLTGHSHFVEDVVLSSDGQ-FALSGSWD 451 (694)
T ss_dssp EECCSSCEEEEECCTTCCSEEEEEETTSEEEEEECCCSTTC-----SCEEEEEEECCSSCEEEEEECTTSS-EEEEEETT
T ss_pred cccCCceeEEEEecCCCCCEEEEEeCCCcEEEEEccCCCcc-----cccccceecCCCCcEEEEEECCCCC-EEEEEeCC
Confidence 45799999999999988779999999999999999762111 1223457889999999999999887 89999999
Q ss_pred CcEEEEeCCCCCCCCcccceeeeecCCccEeeEEEecCCCcEEEEEeCCCeEEEEEcCCCCCCCCeeeeeccCCCeeEEE
Q 014454 201 AQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLA 280 (424)
Q Consensus 201 g~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~v~ 280 (424)
|+|++||+.++ .....+.+|...|.+++|+|++.. |++++.|++|++||+.............+|...|.+++
T Consensus 452 g~v~vwd~~~~------~~~~~~~~h~~~v~~~~~s~~~~~-l~s~s~D~~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~ 524 (694)
T 3dm0_A 452 GELRLWDLAAG------VSTRRFVGHTKDVLSVAFSLDNRQ-IVSASRDRTIKLWNTLGECKYTISEGGEGHRDWVSCVR 524 (694)
T ss_dssp SEEEEEETTTT------EEEEEEECCSSCEEEEEECTTSSC-EEEEETTSCEEEECTTSCEEEEECSSTTSCSSCEEEEE
T ss_pred CcEEEEECCCC------cceeEEeCCCCCEEEEEEeCCCCE-EEEEeCCCEEEEEECCCCcceeeccCCCCCCCcEEEEE
Confidence 99999999876 345667889999999999999875 46999999999999865321000111246888999999
Q ss_pred ecCCCC-eEEEEEeCCCcEEEEECCCCCCcceEecCCCCCEEEEEEcCCCCcEEEEEECCCeEEEeeCCCCCcccCCCCc
Q 014454 281 FNPFNE-WILATGSTDKTVKLFDLRKISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPEDA 359 (424)
Q Consensus 281 ~~~~~~-~~l~tg~~dg~i~iwd~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~ 359 (424)
|+|++. .+|++|+.|++|++||+++ .+....+.+|...|++++|+|++. +|++++.||.|+|||++.+.........
T Consensus 525 ~~~~~~~~~l~s~s~d~~v~vwd~~~-~~~~~~~~~h~~~v~~v~~spdg~-~l~sg~~Dg~i~iwd~~~~~~~~~~~~~ 602 (694)
T 3dm0_A 525 FSPNTLQPTIVSASWDKTVKVWNLSN-CKLRSTLAGHTGYVSTVAVSPDGS-LCASGGKDGVVLLWDLAEGKKLYSLEAN 602 (694)
T ss_dssp ECSCSSSCEEEEEETTSCEEEEETTT-CCEEEEECCCSSCEEEEEECTTSS-EEEEEETTSBCEEEETTTTEEEECCBCS
T ss_pred EeCCCCcceEEEEeCCCeEEEEECCC-CcEEEEEcCCCCCEEEEEEeCCCC-EEEEEeCCCeEEEEECCCCceEEEecCC
Confidence 999862 4799999999999999998 678889999999999999999995 8999999999999999876543322111
Q ss_pred C---------C-----------------CCCeeeEEEcC-------------------CCCCcceEEeCCCCCcEEEEEe
Q 014454 360 E---------D-----------------GPPELLFIHGG-------------------HTSKISDFSWNPCEDWVISSVA 394 (424)
Q Consensus 360 ~---------~-----------------~~~~~~~~~~~-------------------h~~~v~~~~~~~~~~~~l~s~~ 394 (424)
. + ....++..+.. +...+++++|+|+++ +|++|+
T Consensus 603 ~~v~~~~~sp~~~~l~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~spdg~-~l~sgs 681 (694)
T 3dm0_A 603 SVIHALCFSPNRYWLCAATEHGIKIWDLESKSIVEDLKVDLKAEAEKADNSGPAATKRKVIYCTSLNWSADGS-TLFSGY 681 (694)
T ss_dssp SCEEEEEECSSSSEEEEEETTEEEEEETTTTEEEEEECCCCC----------------CCCCEEEEEECTTSS-EEEEEE
T ss_pred CcEEEEEEcCCCcEEEEEcCCCEEEEECCCCCChhhhccccccccccccccccccCCceeEEeeeEEEcCCCC-EEEEEc
Confidence 0 0 00111111211 111367899999999 699999
Q ss_pred CCCcEEEEecC
Q 014454 395 EDNILQIWQMA 405 (424)
Q Consensus 395 ~dg~i~vw~~~ 405 (424)
.||.|+||++.
T Consensus 682 ~Dg~i~iW~i~ 692 (694)
T 3dm0_A 682 TDGVIRVWGIG 692 (694)
T ss_dssp TTSEEEEEEC-
T ss_pred CCCeEEEEecc
Confidence 99999999985
No 40
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=100.00 E-value=1.2e-34 Score=272.13 Aligned_cols=269 Identities=19% Similarity=0.245 Sum_probs=215.4
Q ss_pred eccCCceeEEEecC-CCCcEEEEEeCCCeEEEEeCCCCCCCCCCCCCCCCcEEE-----------ecCCCceeEEEecCC
Q 014454 122 INHDGEVNRARYMP-QNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRL-----------RGHSTEGYGLSWSKF 189 (424)
Q Consensus 122 ~~h~~~v~~~~~~p-~~~~~latg~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~-----------~~h~~~v~~l~~~~~ 189 (424)
..|.+.|++++|+| ++. +||+|+.||.|+||++.... ....... .+|...|.+++|+|+
T Consensus 40 ~~h~~~v~~~~~s~~~~~-~l~~~~~dg~i~iw~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 110 (408)
T 4a11_B 40 RIHGGGINTLDIEPVEGR-YMLSGGSDGVIVLYDLENSS--------RQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPH 110 (408)
T ss_dssp CCCSSCEEEEEECTTTCC-EEEEEETTSCEEEEECCCCS--------SSSCEEECEEEEECTTCTTCCSSCEEEEEECTT
T ss_pred eccCCcEEEEEEecCCCC-EEEEEcCCCeEEEEECCCCc--------ccceEeccccccccccccccCCCcEEEEEEccC
Confidence 35999999999999 775 89999999999999998721 1212111 259999999999996
Q ss_pred CCceEEEEeCCCcEEEEeCCCCCCCCcccceeeeecCCccEeeEEEecCCC--cEEEEEeCCCeEEEEEcCCCCCCCCee
Q 014454 190 KEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHE--YLFGSVGDDQYLLIWDLRTPSVSKPVQ 267 (424)
Q Consensus 190 ~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~--~~~~s~~~dg~i~i~d~~~~~~~~~~~ 267 (424)
+..+|++++.||.|++||+.++. ....+. +...+.++.|++.+. .++++++.||.|++||++++.. +.
T Consensus 111 ~~~~l~s~~~d~~i~iwd~~~~~------~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~---~~ 180 (408)
T 4a11_B 111 DTGMFTSSSFDKTLKVWDTNTLQ------TADVFN-FEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGSC---SH 180 (408)
T ss_dssp CTTCEEEEETTSEEEEEETTTTE------EEEEEE-CSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSSSCC---CE
T ss_pred CCcEEEEEeCCCeEEEeeCCCCc------cceecc-CCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCcce---ee
Confidence 55589999999999999998752 233333 678899999998654 3778999999999999998664 67
Q ss_pred eeeccCCCeeEEEecCCCCeEEEEEeCCCcEEEEECCCCCCcceEe---------------cCCCCCEEEEEEcCCCCcE
Q 014454 268 SVVAHQSEVNCLAFNPFNEWILATGSTDKTVKLFDLRKISTALHTF---------------DSHKEEVFQVGWNPKNETI 332 (424)
Q Consensus 268 ~~~~~~~~v~~v~~~~~~~~~l~tg~~dg~i~iwd~~~~~~~~~~~---------------~~h~~~v~~~~~sp~~~~~ 332 (424)
.+..|...|++++|+|++.++|++|+.||.|++||++....++..+ ..|...|.+++|+|++. +
T Consensus 181 ~~~~~~~~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~ 259 (408)
T 4a11_B 181 ILQGHRQEILAVSWSPRYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTSDGL-H 259 (408)
T ss_dssp EECCCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECTTSS-E
T ss_pred eecCCCCcEEEEEECCCCCcEEEEEcCCCcEEEEECCCCCcccccccccccccceeeccccccccCceeEEEEcCCCC-E
Confidence 7788999999999999998789999999999999999855455555 57889999999999985 7
Q ss_pred EEEEECCCeEEEeeCCCCCcccCCCCcC---------------------------------CCCCeeeEEEcCCCCCcce
Q 014454 333 LASCCLGRRLMVWDLSRIDEEQTPEDAE---------------------------------DGPPELLFIHGGHTSKISD 379 (424)
Q Consensus 333 l~s~~~dg~i~iwd~~~~~~~~~~~~~~---------------------------------~~~~~~~~~~~~h~~~v~~ 379 (424)
|++++.||.|++||+..+.......... ......+..+.+|...|++
T Consensus 260 l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~v~~ 339 (408)
T 4a11_B 260 LLTVGTDNRMRLWNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYGSTIAVYTVYSGEQITMLKGHYKTVDC 339 (408)
T ss_dssp EEEEETTSCEEEEETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEETTEEEEEETTTCCEEEEECCCSSCEEE
T ss_pred EEEecCCCeEEEEECCCCccceeccccccccccccceeEEecCCCceEEEEecCCEEEEEECcCCcceeeeccCCCeEEE
Confidence 9999999999999998865432211100 0123556777899999999
Q ss_pred EEeCCCCCcEEEEEeCCCcEEEEecCCccCCC
Q 014454 380 FSWNPCEDWVISSVAEDNILQIWQMAENIYHD 411 (424)
Q Consensus 380 ~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~~~ 411 (424)
++|+|+++ +|++++.||.|++|++.+.....
T Consensus 340 ~~~s~~~~-~l~s~~~dg~i~iw~~~~~~~~~ 370 (408)
T 4a11_B 340 CVFQSNFQ-ELYSGSRDCNILAWVPSLYEPVP 370 (408)
T ss_dssp EEEETTTT-EEEEEETTSCEEEEEECC-----
T ss_pred EEEcCCCC-EEEEECCCCeEEEEeCCCCCccC
Confidence 99999999 79999999999999999875543
No 41
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=100.00 E-value=2.1e-35 Score=270.80 Aligned_cols=275 Identities=19% Similarity=0.321 Sum_probs=217.8
Q ss_pred eccCCceeEEEecCCCCcEEEEEeCCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCceeEEEecCC--CCceEEEEeC
Q 014454 122 INHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKF--KEGHLLSGSD 199 (424)
Q Consensus 122 ~~h~~~v~~~~~~p~~~~~latg~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~--~~~~l~s~~~ 199 (424)
.+|.+.|++++|+|++. +||+|+.||.|+||++.... ........+.+|...|.+++|+|. +. +|++|+.
T Consensus 8 ~gH~~~v~~~~~~~~~~-~l~~~~~dg~i~iw~~~~~~------~~~~~~~~~~~~~~~v~~~~~~~~~d~~-~l~s~~~ 79 (351)
T 3f3f_A 8 SGHDDLVHDVVYDFYGR-HVATCSSDQHIKVFKLDKDT------SNWELSDSWRAHDSSIVAIDWASPEYGR-IIASASY 79 (351)
T ss_dssp CCCSSCEEEEEECSSSS-EEEEEETTSEEEEEEECSSS------CCEEEEEEEECCSSCEEEEEECCGGGCS-EEEEEET
T ss_pred cccccceeEEEEcCCCC-EEEEeeCCCeEEEEECCCCC------CcceecceeccCCCcEEEEEEcCCCCCC-EEEEEcC
Confidence 47999999999999886 89999999999999998621 112345667899999999999994 55 8999999
Q ss_pred CCcEEEEeCCCCCCC---CcccceeeeecCCccEeeEEEecC--CCcEEEEEeCCCeEEEEEcCCCCCCCCeee------
Q 014454 200 DAQICLWDINAAPKN---KSLEAMQIFKVHEGVVEDVAWHLR--HEYLFGSVGDDQYLLIWDLRTPSVSKPVQS------ 268 (424)
Q Consensus 200 dg~i~iwd~~~~~~~---~~~~~~~~~~~~~~~v~~~~~~~~--~~~~~~s~~~dg~i~i~d~~~~~~~~~~~~------ 268 (424)
||.|++||++.+... .....+..+..|...|.+++|+|+ +. ++++++.||.|++||++++.....+..
T Consensus 80 dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~-~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~ 158 (351)
T 3f3f_A 80 DKTVKLWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGL-KLACLGNDGILRLYDALEPSDLRSWTLTSEMKV 158 (351)
T ss_dssp TSCEEEEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCS-EEEEEETTCEEEEEECSSTTCTTCCEEEEEEES
T ss_pred CCeEEEEecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCc-EEEEecCCCcEEEecCCChHHhccccccccccc
Confidence 999999999876432 122446667789999999999998 65 667999999999999998765333221
Q ss_pred ----eeccCCCeeEEEecCC---CCeEEEEEeCCCcEEEEECCCCCCc--ceEecCCCCCEEEEEEcCCCC---cEEEEE
Q 014454 269 ----VVAHQSEVNCLAFNPF---NEWILATGSTDKTVKLFDLRKISTA--LHTFDSHKEEVFQVGWNPKNE---TILASC 336 (424)
Q Consensus 269 ----~~~~~~~v~~v~~~~~---~~~~l~tg~~dg~i~iwd~~~~~~~--~~~~~~h~~~v~~~~~sp~~~---~~l~s~ 336 (424)
...|...+.+++|+|+ +. +|++++.++.+.+|+... ... +..+.+|...|++++|+|++. .+|+++
T Consensus 159 ~~~~~~~~~~~~~~~~~~p~~~~~~-~l~~~~~~~~~~~~~~~~-~~~~~~~~~~~h~~~i~~~~~~p~~~~~~~~l~s~ 236 (351)
T 3f3f_A 159 LSIPPANHLQSDFCLSWCPSRFSPE-KLAVSALEQAIIYQRGKD-GKLHVAAKLPGHKSLIRSISWAPSIGRWYQLIATG 236 (351)
T ss_dssp CSCCCSSCSCCCEEEEECCCSSSCC-EEEEEETTEEEEEEECTT-SCEEEEEECCCCCSCEEEEEECCCSSCSSEEEEEE
T ss_pred cccccCCcccceeEEEeccCCCCCc-EEEEecCCCcEEEEccCC-CceeeeeecCCCCcceeEEEECCCCCCcceEEEEE
Confidence 1257788999999997 55 799999999998887776 443 677888999999999999973 489999
Q ss_pred ECCCeEEEeeCCCCCcccCCCCc--------------------------------CCCCCeeeEEEcCCCCCcceEEeCC
Q 014454 337 CLGRRLMVWDLSRIDEEQTPEDA--------------------------------EDGPPELLFIHGGHTSKISDFSWNP 384 (424)
Q Consensus 337 ~~dg~i~iwd~~~~~~~~~~~~~--------------------------------~~~~~~~~~~~~~h~~~v~~~~~~~ 384 (424)
+.||.|++||++........... ......++..+.+|...|++++|+|
T Consensus 237 ~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~ 316 (351)
T 3f3f_A 237 CKDGRIRIFKITEKLSPLASEESLTNSNMFDNSADVDMDAQGRSDSNTEEKAELQSNLQVELLSEHDDHNGEVWSVSWNL 316 (351)
T ss_dssp ETTSCEEEEEEEECC---------------------------------------CCSEEEEEEEEECTTSSCEEEEEECS
T ss_pred cCCCeEEEEeCCCCcCccccCCcccceeccCCCcccccccccccccccceeeeecccccccEEEEEecccccEEEEEEcC
Confidence 99999999999875322111000 0011256778889999999999999
Q ss_pred CCCcEEEEEeCCCcEEEEecCCcc
Q 014454 385 CEDWVISSVAEDNILQIWQMAENI 408 (424)
Q Consensus 385 ~~~~~l~s~~~dg~i~vw~~~~~~ 408 (424)
+++ +|++++.||.|+||++..+.
T Consensus 317 ~~~-~l~s~~~dg~v~iw~~~~~~ 339 (351)
T 3f3f_A 317 TGT-ILSSAGDDGKVRLWKATYSN 339 (351)
T ss_dssp SSC-CEEEEETTSCEEEEEECTTS
T ss_pred CCC-EEEEecCCCcEEEEecCcCc
Confidence 999 69999999999999998753
No 42
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=100.00 E-value=1.3e-34 Score=271.89 Aligned_cols=257 Identities=21% Similarity=0.371 Sum_probs=215.4
Q ss_pred CcEEEEEEeccCCceeEEEecCCCCcEEEEEeCCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCceeEEEecCCCCce
Q 014454 114 GKVQIIQQINHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGH 193 (424)
Q Consensus 114 ~~~~~~~~~~h~~~v~~~~~~p~~~~~latg~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~ 193 (424)
++........|.+.|++++|+|++. +||+|+.||.|++||+.. ......+.+|...|.+++|++ . +
T Consensus 123 ~~~~~~~~~~~~~~v~~v~~s~~~~-~l~~~~~dg~i~iwd~~~----------~~~~~~~~~~~~~v~~~~~~~--~-~ 188 (401)
T 4aez_A 123 GSVSALAETDESTYVASVKWSHDGS-FLSVGLGNGLVDIYDVES----------QTKLRTMAGHQARVGCLSWNR--H-V 188 (401)
T ss_dssp CCEEEEEECCTTCCEEEEEECTTSS-EEEEEETTSCEEEEETTT----------CCEEEEECCCSSCEEEEEEET--T-E
T ss_pred CcEeEeeecCCCCCEEEEEECCCCC-EEEEECCCCeEEEEECcC----------CeEEEEecCCCCceEEEEECC--C-E
Confidence 3444455556899999999999886 899999999999999987 456778889999999999953 3 7
Q ss_pred EEEEeCCCcEEEEeCCCCCCCCcccceeeeecCCccEeeEEEecCCCcEEEEEeCCCeEEEEEcCCCCCCCCeeeeeccC
Q 014454 194 LLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQ 273 (424)
Q Consensus 194 l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~ 273 (424)
|++|+.||.|++||++... .....+.+|...|.+++|+|++. +|++++.||.|++||++++. ++..+..|.
T Consensus 189 l~~~~~dg~i~i~d~~~~~-----~~~~~~~~~~~~v~~~~~~~~~~-~l~s~~~d~~v~iwd~~~~~---~~~~~~~~~ 259 (401)
T 4aez_A 189 LSSGSRSGAIHHHDVRIAN-----HQIGTLQGHSSEVCGLAWRSDGL-QLASGGNDNVVQIWDARSSI---PKFTKTNHN 259 (401)
T ss_dssp EEEEETTSEEEEEETTSSS-----CEEEEEECCSSCEEEEEECTTSS-EEEEEETTSCEEEEETTCSS---EEEEECCCS
T ss_pred EEEEcCCCCEEEEecccCc-----ceeeEEcCCCCCeeEEEEcCCCC-EEEEEeCCCeEEEccCCCCC---ccEEecCCc
Confidence 9999999999999998543 24566778999999999999876 56799999999999999855 466777899
Q ss_pred CCeeEEEecCCCCeEEEEEe--CCCcEEEEECCCCCCcceEecCCCCCEEEEEEcCCCCcEEEEE--ECCCeEEEeeCCC
Q 014454 274 SEVNCLAFNPFNEWILATGS--TDKTVKLFDLRKISTALHTFDSHKEEVFQVGWNPKNETILASC--CLGRRLMVWDLSR 349 (424)
Q Consensus 274 ~~v~~v~~~~~~~~~l~tg~--~dg~i~iwd~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~l~s~--~~dg~i~iwd~~~ 349 (424)
..|.+++|+|++..++++|+ .|+.|++||+++ +.++..+. +...|.+++|+|++. +|+++ +.||.|++||+..
T Consensus 260 ~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~-~~~~~~~~-~~~~v~~~~~s~~~~-~l~~~~g~~dg~i~v~~~~~ 336 (401)
T 4aez_A 260 AAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAAT-GARVNTVD-AGSQVTSLIWSPHSK-EIMSTHGFPDNNLSIWSYSS 336 (401)
T ss_dssp SCCCEEEECTTSTTEEEEECCTTTCEEEEEETTT-CCEEEEEE-CSSCEEEEEECSSSS-EEEEEECTTTCEEEEEEEET
T ss_pred ceEEEEEECCCCCCEEEEecCCCCCEEEEEECCC-CCEEEEEe-CCCcEEEEEECCCCC-eEEEEeecCCCcEEEEecCC
Confidence 99999999999888888876 799999999998 67777775 578899999999997 56664 3899999999976
Q ss_pred CCcccCCCCcCCCCCeeeEEEcCCCCCcceEEeCCCCCcEEEEEeCCCcEEEEecCCccC
Q 014454 350 IDEEQTPEDAEDGPPELLFIHGGHTSKISDFSWNPCEDWVISSVAEDNILQIWQMAENIY 409 (424)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~ 409 (424)
... .....+.+|...|.+++|+|+++ +|++++.||.|++|++.++..
T Consensus 337 ~~~------------~~~~~~~~h~~~v~~~~~s~dg~-~l~s~~~dg~i~iw~~~~~~~ 383 (401)
T 4aez_A 337 SGL------------TKQVDIPAHDTRVLYSALSPDGR-ILSTAASDENLKFWRVYDGDH 383 (401)
T ss_dssp TEE------------EEEEEEECCSSCCCEEEECTTSS-EEEEECTTSEEEEEECCC---
T ss_pred ccc------------eeEEEecCCCCCEEEEEECCCCC-EEEEEeCCCcEEEEECCCCcc
Confidence 421 34455678999999999999999 799999999999999988754
No 43
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=1.1e-35 Score=294.10 Aligned_cols=245 Identities=20% Similarity=0.310 Sum_probs=207.2
Q ss_pred cCCceeEEEecCCCCcEEEEEeCCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCceeEEEecCCCCceEEEEeCCCcE
Q 014454 124 HDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDDAQI 203 (424)
Q Consensus 124 h~~~v~~~~~~p~~~~~latg~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i 203 (424)
+.+.+.+++|+|+++ +||+++ ++.|+||++.. ......+.+|...|++++|+|++. +|++|+.||+|
T Consensus 17 ~~g~~~~~~~spdg~-~l~~~~-~~~v~l~~~~~----------~~~~~~~~~h~~~v~~~~~spdg~-~lasg~~d~~v 83 (611)
T 1nr0_A 17 ARGTAVVLGNTPAGD-KIQYCN-GTSVYTVPVGS----------LTDTEIYTEHSHQTTVAKTSPSGY-YCASGDVHGNV 83 (611)
T ss_dssp CTTCCCCCEECTTSS-EEEEEE-TTEEEEEETTC----------SSCCEEECCCSSCEEEEEECTTSS-EEEEEETTSEE
T ss_pred ccCceeEEeeCCCCC-EEEeCC-CCEEEEecCCC----------cccCeEecCCCCceEEEEECCCCc-EEEEEeCCCCE
Confidence 467889999999987 788877 57999999976 455678899999999999999998 89999999999
Q ss_pred EEEeCCCCCCCCcccceeeeecCCccEeeEEEecCCCcEEEEEeCC----CeEEEEEcCCCCCCCCeeeeeccCCCeeEE
Q 014454 204 CLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDD----QYLLIWDLRTPSVSKPVQSVVAHQSEVNCL 279 (424)
Q Consensus 204 ~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~d----g~i~i~d~~~~~~~~~~~~~~~~~~~v~~v 279 (424)
+|||+.++.. .....+.+|.+.|.+++|+|++..++ +++.+ +.|++||... ....+.+|...|+++
T Consensus 84 ~lWd~~~~~~----~~~~~~~~~~~~v~~v~fs~dg~~l~-~~~~~~~~~~~v~~wd~~~-----~~~~l~gh~~~v~~v 153 (611)
T 1nr0_A 84 RIWDTTQTTH----ILKTTIPVFSGPVKDISWDSESKRIA-AVGEGRERFGHVFLFDTGT-----SNGNLTGQARAMNSV 153 (611)
T ss_dssp EEEESSSTTC----CEEEEEECSSSCEEEEEECTTSCEEE-EEECCSSCSEEEEETTTCC-----BCBCCCCCSSCEEEE
T ss_pred EEeECCCCcc----eeeEeecccCCceEEEEECCCCCEEE-EEECCCCceeEEEEeeCCC-----CcceecCCCCCceEE
Confidence 9999975432 12345678999999999999998654 55543 4788888533 245667899999999
Q ss_pred EecCCCCeEEEEEeCCCcEEEEECCCCCCcceEecCCCCCEEEEEEcCCCCcEEEEEECCCeEEEeeCCCCCcccCCCCc
Q 014454 280 AFNPFNEWILATGSTDKTVKLFDLRKISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPEDA 359 (424)
Q Consensus 280 ~~~~~~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~ 359 (424)
+|+|+++..|++|+.|++|++||.+. .+.+..+.+|...|.+++|+|++. +|++++.|++|++||+..+..
T Consensus 154 ~f~p~~~~~l~s~s~D~~v~lwd~~~-~~~~~~l~~H~~~V~~v~fspdg~-~las~s~D~~i~lwd~~~g~~------- 224 (611)
T 1nr0_A 154 DFKPSRPFRIISGSDDNTVAIFEGPP-FKFKSTFGEHTKFVHSVRYNPDGS-LFASTGGDGTIVLYNGVDGTK------- 224 (611)
T ss_dssp EECSSSSCEEEEEETTSCEEEEETTT-BEEEEEECCCSSCEEEEEECTTSS-EEEEEETTSCEEEEETTTCCE-------
T ss_pred EECCCCCeEEEEEeCCCeEEEEECCC-CeEeeeeccccCceEEEEECCCCC-EEEEEECCCcEEEEECCCCcE-------
Confidence 99999887799999999999999887 677888999999999999999996 899999999999999987532
Q ss_pred CCCCCeeeEEEc-------CCCCCcceEEeCCCCCcEEEEEeCCCcEEEEecCCcc
Q 014454 360 EDGPPELLFIHG-------GHTSKISDFSWNPCEDWVISSVAEDNILQIWQMAENI 408 (424)
Q Consensus 360 ~~~~~~~~~~~~-------~h~~~v~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~ 408 (424)
+..+. +|...|.+++|+|+++ +|++++.|++|++||+.++.
T Consensus 225 -------~~~~~~~~~~~~~h~~~V~~v~~spdg~-~l~s~s~D~~v~lWd~~~~~ 272 (611)
T 1nr0_A 225 -------TGVFEDDSLKNVAHSGSVFGLTWSPDGT-KIASASADKTIKIWNVATLK 272 (611)
T ss_dssp -------EEECBCTTSSSCSSSSCEEEEEECTTSS-EEEEEETTSEEEEEETTTTE
T ss_pred -------eeeeccccccccccCCCEEEEEECCCCC-EEEEEeCCCeEEEEeCCCCc
Confidence 33332 7999999999999999 79999999999999998764
No 44
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.1e-35 Score=276.34 Aligned_cols=259 Identities=19% Similarity=0.302 Sum_probs=213.1
Q ss_pred EeccCCceeEEEecCCCCcEEEEEeCCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCceeEEEecCC--CCceEEEEe
Q 014454 121 QINHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKF--KEGHLLSGS 198 (424)
Q Consensus 121 ~~~h~~~v~~~~~~p~~~~~latg~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~--~~~~l~s~~ 198 (424)
..+|.+.|++++|+|++. +||+|+.||.|+||++.. ........+.+|...|++++|+++ +. +|++|+
T Consensus 7 ~~~h~~~v~~~~~s~~~~-~l~~~~~dg~i~iw~~~~--------~~~~~~~~~~~h~~~v~~~~~~~~~~~~-~l~s~~ 76 (379)
T 3jrp_A 7 ANAHNELIHDAVLDYYGK-RLATCSSDKTIKIFEVEG--------ETHKLIDTLTGHEGPVWRVDWAHPKFGT-ILASCS 76 (379)
T ss_dssp EEECCCCEEEEEECSSSS-EEEEEETTSCEEEEEEET--------TEEEEEEEECCCSSCEEEEEECCGGGCS-EEEEEE
T ss_pred ecCCcccEEEEEEcCCCC-EEEEEECCCcEEEEecCC--------CcceeeeEecCCCCcEEEEEeCCCCCCC-EEEEec
Confidence 347999999999999886 899999999999999974 224556678899999999999876 55 899999
Q ss_pred CCCcEEEEeCCCCCCCCcccceeeeecCCccEeeEEEecC--CCcEEEEEeCCCeEEEEEcCCCCCCCCeeeeeccCCCe
Q 014454 199 DDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLR--HEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEV 276 (424)
Q Consensus 199 ~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~~~~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v 276 (424)
.||.|++||+.++. ......+..|...|.+++|+|+ +. +|++++.||.|++||++.... .....+..|...|
T Consensus 77 ~dg~v~iwd~~~~~----~~~~~~~~~~~~~v~~~~~~~~~~~~-~l~~~~~d~~i~v~d~~~~~~-~~~~~~~~~~~~v 150 (379)
T 3jrp_A 77 YDGKVLIWKEENGR----WSQIAVHAVHSASVNSVQWAPHEYGP-LLLVASSDGKVSVVEFKENGT-TSPIIIDAHAIGV 150 (379)
T ss_dssp TTSCEEEEEEETTE----EEEEEEECCCSSCEEEEEECCGGGCS-EEEEEETTSEEEEEECCTTSC-CCEEEEECCTTCE
T ss_pred cCCEEEEEEcCCCc----eeEeeeecCCCcceEEEEeCCCCCCC-EEEEecCCCcEEEEecCCCCc-eeeEEecCCCCce
Confidence 99999999998752 1245666779999999999998 55 667999999999999998753 3345667899999
Q ss_pred eEEEecC-------------CCCeEEEEEeCCCcEEEEECCCCCC---cceEecCCCCCEEEEEEcCCC--CcEEEEEEC
Q 014454 277 NCLAFNP-------------FNEWILATGSTDKTVKLFDLRKIST---ALHTFDSHKEEVFQVGWNPKN--ETILASCCL 338 (424)
Q Consensus 277 ~~v~~~~-------------~~~~~l~tg~~dg~i~iwd~~~~~~---~~~~~~~h~~~v~~~~~sp~~--~~~l~s~~~ 338 (424)
++++|+| ++. +|++|+.||.|++||++.... ++..+..|...|.+++|+|++ ..+|++++.
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~ 229 (379)
T 3jrp_A 151 NSASWAPATIEEDGEHNGTKESR-KFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQ 229 (379)
T ss_dssp EEEEECCCC----------CTTC-EEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEET
T ss_pred EEEEEcCccccccccccCCCCCC-EEEEEeCCCeEEEEEecCCCcceeeEEEEecccCcEeEEEECCCCCCCCeEEEEeC
Confidence 9999999 465 799999999999999987432 456778899999999999993 358999999
Q ss_pred CCeEEEeeCCCCCcccCCCCcCCCCCeeeEEEcCCCCCcceEEeCCCCCcEEEEEeCCCcEEEEecCC
Q 014454 339 GRRLMVWDLSRIDEEQTPEDAEDGPPELLFIHGGHTSKISDFSWNPCEDWVISSVAEDNILQIWQMAE 406 (424)
Q Consensus 339 dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~vw~~~~ 406 (424)
||.|+|||++...... ...+.....|...|++++|+|+++ +|++++.||.|++|++..
T Consensus 230 dg~i~iwd~~~~~~~~---------~~~~~~~~~~~~~v~~~~~s~~g~-~l~~~~~dg~i~iw~~~~ 287 (379)
T 3jrp_A 230 DRTCIIWTQDNEQGPW---------KKTLLKEEKFPDVLWRASWSLSGN-VLALSGGDNKVTLWKENL 287 (379)
T ss_dssp TSCEEEEEESSTTSCC---------EEEESSSSCCSSCEEEEEECSSSC-CEEEEESSSSEEEEEEEE
T ss_pred CCEEEEEeCCCCCccc---------eeeeeccccCCCcEEEEEEcCCCC-EEEEecCCCcEEEEeCCC
Confidence 9999999998753210 011222234788899999999999 588889999999999973
No 45
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=100.00 E-value=7e-35 Score=272.00 Aligned_cols=245 Identities=16% Similarity=0.224 Sum_probs=195.8
Q ss_pred eccCCceeEEEecCCCCcEEEEEeCCCeEEEEeCCCCCCCCCCCCCCCCcEEEec---CCCceeEEEecCCCCceEEEEe
Q 014454 122 INHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRG---HSTEGYGLSWSKFKEGHLLSGS 198 (424)
Q Consensus 122 ~~h~~~v~~~~~~p~~~~~latg~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~---h~~~v~~l~~~~~~~~~l~s~~ 198 (424)
.+|.+.|.+++|+|++..+|++|+.||.|++||+.. .....+.. |...|.+++|+|++. +|++|+
T Consensus 115 ~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~-----------~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~ 182 (383)
T 3ei3_B 115 MGPGDAITGMKFNQFNTNQLFVSSIRGATTLRDFSG-----------SVIQVFAKTDSWDYWYCCVDVSVSRQ-MLATGD 182 (383)
T ss_dssp CSTTCBEEEEEEETTEEEEEEEEETTTEEEEEETTS-----------CEEEEEECCCCSSCCEEEEEEETTTT-EEEEEE
T ss_pred CCcCCceeEEEeCCCCCCEEEEEeCCCEEEEEECCC-----------CceEEEeccCCCCCCeEEEEECCCCC-EEEEEC
Confidence 479999999999995556899999999999999985 22334443 448899999999887 799999
Q ss_pred CCCcEEEEeCCCCCCCCcccceeeeecCCccEeeEEEecCCCcEEEEEeCCCeEEEEEcCCCCCCCCeeeeeccCCCeeE
Q 014454 199 DDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNC 278 (424)
Q Consensus 199 ~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~ 278 (424)
.||.|++||++. ..+..+..|...|.+++|+|+++.++++++.|+.|++||+++............|...|++
T Consensus 183 ~d~~i~i~d~~~-------~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~v~~ 255 (383)
T 3ei3_B 183 STGRLLLLGLDG-------HEIFKEKLHKAKVTHAEFNPRCDWLMATSSVDATVKLWDLRNIKDKNSYIAEMPHEKPVNA 255 (383)
T ss_dssp TTSEEEEEETTS-------CEEEEEECSSSCEEEEEECSSCTTEEEEEETTSEEEEEEGGGCCSTTCEEEEEECSSCEEE
T ss_pred CCCCEEEEECCC-------CEEEEeccCCCcEEEEEECCCCCCEEEEEeCCCEEEEEeCCCCCcccceEEEecCCCceEE
Confidence 999999999942 2456678899999999999999878889999999999999985533334344479999999
Q ss_pred EEecC-CCCeEEEEEeCCCcEEEEECCCCCCcceEecCCC-----------------CCEEEEEEcCCCCcEEEEEECCC
Q 014454 279 LAFNP-FNEWILATGSTDKTVKLFDLRKISTALHTFDSHK-----------------EEVFQVGWNPKNETILASCCLGR 340 (424)
Q Consensus 279 v~~~~-~~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~~h~-----------------~~v~~~~~sp~~~~~l~s~~~dg 340 (424)
++|+| ++. +|++++.|+.|++||+++ ...+..+..|. ..+..++|+|++.. +++.|+
T Consensus 256 ~~~s~~~~~-~l~~~~~d~~i~iwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~s~dg~~---s~s~d~ 330 (383)
T 3ei3_B 256 AYFNPTDST-KLLTTDQRNEIRVYSSYD-WSKPDQIIIHPHRQFQHLTPIKATWHPMYDLIVAGRYPDDQL---LLNDKR 330 (383)
T ss_dssp EEECTTTSC-EEEEEESSSEEEEEETTB-TTSCSEEEECCBCCCTTSCCCCCEECSSSSEEEEECBCCTTT---CTTCCC
T ss_pred EEEcCCCCC-EEEEEcCCCcEEEEECCC-CccccccccccccccccccceEEeccCCCCceEEEecCCccc---ccCCCC
Confidence 99999 887 699999999999999998 45555555432 33444666666642 667899
Q ss_pred eEEEeeCCCCCcccCCCCcCCCCCeeeEEEcC--CCCCcceEEeCCCCCcEEEEEeCCCcEEEEecCC
Q 014454 341 RLMVWDLSRIDEEQTPEDAEDGPPELLFIHGG--HTSKISDFSWNPCEDWVISSVAEDNILQIWQMAE 406 (424)
Q Consensus 341 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~--h~~~v~~~~~~~~~~~~l~s~~~dg~i~vw~~~~ 406 (424)
.|+|||+.++ .++..+.+ |...+..++|+|+++ +|++++ |+.|+||++++
T Consensus 331 ~i~iwd~~~~--------------~~~~~l~~~~~~~~~~~~~~s~~g~-~l~s~s-d~~i~iw~~~~ 382 (383)
T 3ei3_B 331 TIDIYDANSG--------------GLVHQLRDPNAAGIISLNKFSPTGD-VLASGM-GFNILIWNRED 382 (383)
T ss_dssp CEEEEETTTC--------------CEEEEECBTTBCSCCCEEEECTTSS-EEEEEE-TTEEEEEECC-
T ss_pred eEEEEecCCC--------------ceeeeecCCCCCceEEEEEEecCcc-EEEEec-CCcEEEEecCC
Confidence 9999999875 44566665 456677789999999 688887 99999999975
No 46
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.6e-36 Score=290.65 Aligned_cols=262 Identities=14% Similarity=0.129 Sum_probs=204.4
Q ss_pred EeccCCceeEEEecCCC-C-------cEEEE-------------------EeCCCeEEEEeCCCCCCCCCCCCCCCC--c
Q 014454 121 QINHDGEVNRARYMPQN-P-------FLIAT-------------------KTVSAEVYVFDYSKHPSKPPLDGACSP--D 171 (424)
Q Consensus 121 ~~~h~~~v~~~~~~p~~-~-------~~lat-------------------g~~dg~v~iw~~~~~~~~~~~~~~~~~--~ 171 (424)
.+.+.+.|.+++|+|++ . .+||+ ++.|++|+||++... .... .
T Consensus 129 ~~~~~~~V~sv~w~p~~~~~~~~~~~~~LAv~~~~~~~~~~~~~~~~laS~s~D~tI~iWd~~~~--------~~~~~~~ 200 (524)
T 2j04_B 129 IYNVGGLVTDIAWLNIEENTDIGKDIQYLAVAVSQYMDEPLNEHLEMFDKEKHSSCIQIFKMNTS--------TLHCVKV 200 (524)
T ss_dssp EEECCC--CCCSCEEECCCCSSCSSEEEEEEEEEC------------------CEEEEEEEEETT--------TCCEEEE
T ss_pred EEECCCceeEEEecccCCCCccCcCCeEEEEEEecccCCccchhhhhhccCCCCceEEEEEccCC--------CCCceEE
Confidence 34578999999999975 1 36666 457789999998761 1111 2
Q ss_pred EEEecCCCceeEEEecCCC-----CceEEEEeCCCcEEEEeCCCCCCCC-----cccceeeeecCCccEeeEEEecCCCc
Q 014454 172 LRLRGHSTEGYGLSWSKFK-----EGHLLSGSDDAQICLWDINAAPKNK-----SLEAMQIFKVHEGVVEDVAWHLRHEY 241 (424)
Q Consensus 172 ~~~~~h~~~v~~l~~~~~~-----~~~l~s~~~dg~i~iwd~~~~~~~~-----~~~~~~~~~~~~~~v~~~~~~~~~~~ 241 (424)
..+.+|.+.|.+++|+|++ ..+||+|+.||+|++||+..+.... ...+...+.+|...|++++|++.+
T Consensus 201 ~~l~~~~~~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~~p~~~l~~h~~~v~sv~~s~~~-- 278 (524)
T 2j04_B 201 QTIVHSFGEVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKMCEKPSLTLSLADSLITTFDFLSPT-- 278 (524)
T ss_dssp EEEEECCCSEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEECCCSCSEEECCTTTCEEEEEESSSS--
T ss_pred EEEEecCCcEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccceeecCceEEEEcCCCCEEEEEecCCC--
Confidence 3466788999999999962 2489999999999999998664321 112334577899999999999864
Q ss_pred EEEEEeCCCeEEEEEcCCCCCCCCeeeeeccCCCeeEE--EecCCCCeEEEEEeCCCcEEEEECCCCCCcceEecCCCC-
Q 014454 242 LFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCL--AFNPFNEWILATGSTDKTVKLFDLRKISTALHTFDSHKE- 318 (424)
Q Consensus 242 ~~~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~v--~~~~~~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~~h~~- 318 (424)
.|++|+.||+|++||++++.. +...+..|...|++| +|+|++..+||+|+.|++|+|||+++ .+++..+.+|..
T Consensus 279 ~lasgs~DgtV~lWD~~~~~~--~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~~-~~~~~~~~~~~~~ 355 (524)
T 2j04_B 279 TVVCGFKNGFVAEFDLTDPEV--PSFYDQVHDSYILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKD-IATTKTTVSRFRG 355 (524)
T ss_dssp EEEEEETTSEEEEEETTBCSS--CSEEEECSSSCEEEEEEECCTTSCCEEEEEETTSEEEEECGGG-HHHHCEEEEECSC
T ss_pred eEEEEeCCCEEEEEECCCCCC--ceEEeecccccEEEEEEEcCCCCCeEEEEeccCCeEEEEECCC-CCccccccccccc
Confidence 678999999999999997643 455678899999999 57887634899999999999999997 566666666653
Q ss_pred -CEEEEEEcCCCCcEEEEEECCCeEEEeeCCCCCcccCCCCcCCCCCeeeEEEcCCCCCcceEEeCCCCCcEEEEEeCCC
Q 014454 319 -EVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPEDAEDGPPELLFIHGGHTSKISDFSWNPCEDWVISSVAEDN 397 (424)
Q Consensus 319 -~v~~~~~sp~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg 397 (424)
.|.+++|+|++. .|++++.|++|++||++.. .++..+.+|...|++++|+|+++ +|++|+.||
T Consensus 356 ~~v~~v~fsp~~~-~l~s~~~d~tv~lwd~~~~--------------~~~~~l~gH~~~V~sva~Sp~g~-~l~Sgs~Dg 419 (524)
T 2j04_B 356 SNLVPVVYCPQIY-SYIYSDGASSLRAVPSRAA--------------FAVHPLVSRETTITAIGVSRLHP-MVLAGSADG 419 (524)
T ss_dssp CSCCCEEEETTTT-EEEEECSSSEEEEEETTCT--------------TCCEEEEECSSCEEEEECCSSCC-BCEEEETTT
T ss_pred CcccceEeCCCcC-eEEEeCCCCcEEEEECccc--------------ccceeeecCCCceEEEEeCCCCC-eEEEEECCC
Confidence 588999999986 6889999999999999874 33456678999999999999999 689999999
Q ss_pred cEEEEecCCccCCC
Q 014454 398 ILQIWQMAENIYHD 411 (424)
Q Consensus 398 ~i~vw~~~~~~~~~ 411 (424)
+|++|++..+.+..
T Consensus 420 tv~lwd~~~~~~~~ 433 (524)
T 2j04_B 420 SLIITNAARRLLHG 433 (524)
T ss_dssp EEECCBSCSSTTTC
T ss_pred EEEEEechHhhccc
Confidence 99999998775543
No 47
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.4e-34 Score=267.76 Aligned_cols=274 Identities=15% Similarity=0.282 Sum_probs=225.3
Q ss_pred CcEEEEEEeccCCceeEEEecCCCCcEEEEEeCCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCceeEEEecCCCCce
Q 014454 114 GKVQIIQQINHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGH 193 (424)
Q Consensus 114 ~~~~~~~~~~h~~~v~~~~~~p~~~~~latg~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~ 193 (424)
..++.....+|.+.|++++|+|++. +||+|+.||.|+|||+.. ......+.+|...|.+++|+|++. +
T Consensus 21 ~~~~~~~l~~h~~~v~~~~~s~~~~-~l~~~~~dg~i~vwd~~~----------~~~~~~~~~h~~~v~~~~~~~~~~-~ 88 (369)
T 3zwl_B 21 SHMKAIKLTGHERPLTQVKYNKEGD-LLFSCSKDSSASVWYSLN----------GERLGTLDGHTGTIWSIDVDCFTK-Y 88 (369)
T ss_dssp CSEEEEEEECCSSCEEEEEECTTSC-EEEEEESSSCEEEEETTT----------CCEEEEECCCSSCEEEEEECTTSS-E
T ss_pred cccccEEEEEeeceEEEEEEcCCCC-EEEEEeCCCEEEEEeCCC----------chhhhhhhhcCCcEEEEEEcCCCC-E
Confidence 3466677778999999999999886 899999999999999987 466778889999999999999887 7
Q ss_pred EEEEeCCCcEEEEeCCCCCCCCcccceeeeecCCccEeeEEEecCCCcEEEEEeCC-----CeEEEEEcCCCCCCC----
Q 014454 194 LLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDD-----QYLLIWDLRTPSVSK---- 264 (424)
Q Consensus 194 l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~d-----g~i~i~d~~~~~~~~---- 264 (424)
|++++.||.|++||+.++. .+..+. +...|.+++|+|++.. +++++.+ |.|++||++......
T Consensus 89 l~s~~~dg~i~iwd~~~~~------~~~~~~-~~~~v~~~~~~~~~~~-l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~ 160 (369)
T 3zwl_B 89 CVTGSADYSIKLWDVSNGQ------CVATWK-SPVPVKRVEFSPCGNY-FLAILDNVMKNPGSINIYEIERDSATHELTK 160 (369)
T ss_dssp EEEEETTTEEEEEETTTCC------EEEEEE-CSSCEEEEEECTTSSE-EEEEECCBTTBCCEEEEEEEEECTTTCCEEE
T ss_pred EEEEeCCCeEEEEECCCCc------EEEEee-cCCCeEEEEEccCCCE-EEEecCCccCCCCEEEEEEecCCccceeecc
Confidence 9999999999999998763 334444 7889999999999875 5578888 999999998765322
Q ss_pred ----CeeeeeccCC--CeeEEEecCCCCeEEEEEeCCCcEEEEECCCCCCcceEecCCCCCEEEEEEcCCCCcEEEEEEC
Q 014454 265 ----PVQSVVAHQS--EVNCLAFNPFNEWILATGSTDKTVKLFDLRKISTALHTFDSHKEEVFQVGWNPKNETILASCCL 338 (424)
Q Consensus 265 ----~~~~~~~~~~--~v~~v~~~~~~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~l~s~~~ 338 (424)
++..+..|.. .+.+++|+|++. +|++|+.||.|++||+++...++..+..|...|.+++|+|++. +|++++.
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~ 238 (369)
T 3zwl_B 161 VSEEPIHKIITHEGLDAATVAGWSTKGK-YIIAGHKDGKISKYDVSNNYEYVDSIDLHEKSISDMQFSPDLT-YFITSSR 238 (369)
T ss_dssp ECSSCSEEEECCTTCCCEEEEEECGGGC-EEEEEETTSEEEEEETTTTTEEEEEEECCSSCEEEEEECTTSS-EEEEEET
T ss_pred cccceeeeccCCcCccceeEEEEcCCCC-EEEEEcCCCEEEEEECCCCcEeEEEEecCCCceeEEEECCCCC-EEEEecC
Confidence 3344455655 899999999988 6899999999999999986678888999999999999999985 7999999
Q ss_pred CCeEEEeeCCCCCcccCCCCcC-----------------------------------------CCCCeeeEEEcCCCCCc
Q 014454 339 GRRLMVWDLSRIDEEQTPEDAE-----------------------------------------DGPPELLFIHGGHTSKI 377 (424)
Q Consensus 339 dg~i~iwd~~~~~~~~~~~~~~-----------------------------------------~~~~~~~~~~~~h~~~v 377 (424)
|+.|++||++............ ......+..+.+|...|
T Consensus 239 d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v 318 (369)
T 3zwl_B 239 DTNSFLVDVSTLQVLKKYETDCPLNTAVITPLKEFIILGGGQEAKDVTTTSANEGKFEARFYHKIFEEEIGRVQGHFGPL 318 (369)
T ss_dssp TSEEEEEETTTCCEEEEEECSSCEEEEEECSSSSEEEEEECCC-------------CEEEEEETTTCCEEEEEECCSSCE
T ss_pred CceEEEEECCCCceeeeecCCCCceeEEecCCCceEEEeecCCCceEEEEecCCCcceeEEEecCCCcchhheecccCcE
Confidence 9999999998765432111000 00123445667899999
Q ss_pred ceEEeCCCCCcEEEEEeCCCcEEEEecCCccCC
Q 014454 378 SDFSWNPCEDWVISSVAEDNILQIWQMAENIYH 410 (424)
Q Consensus 378 ~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~~ 410 (424)
++++|+|+++ +|++++.||.|++|++..+.+.
T Consensus 319 ~~~~~s~~~~-~l~s~~~dg~v~iw~~~~~~~~ 350 (369)
T 3zwl_B 319 NTVAISPQGT-SYASGGEDGFIRLHHFEKSYFD 350 (369)
T ss_dssp EEEEECTTSS-EEEEEETTSEEEEEEECHHHHT
T ss_pred EEEEECCCCC-EEEEEcCCCeEEEEECccccch
Confidence 9999999999 7999999999999999987543
No 48
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=100.00 E-value=9.3e-35 Score=272.24 Aligned_cols=257 Identities=14% Similarity=0.239 Sum_probs=210.3
Q ss_pred EEeccCCceeEEEecCC----C---CcEEEEEeCCCeEEEEeCCCCCCCCCCCCCCCCcEEEecC-----CCceeEEEec
Q 014454 120 QQINHDGEVNRARYMPQ----N---PFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGH-----STEGYGLSWS 187 (424)
Q Consensus 120 ~~~~h~~~v~~~~~~p~----~---~~~latg~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~h-----~~~v~~l~~~ 187 (424)
....|...|++++|+|+ + . +|++++.||.|++|++....... ......+..| ...|.+++|+
T Consensus 57 ~~~~h~~~v~~~~~~~~~~~~g~~~~-~l~s~~~dg~i~iw~~~~~~~~~-----~~~~~~~~~~~~~~~~~~v~~~~~~ 130 (397)
T 1sq9_A 57 SHFVHKSGLHHVDVLQAIERDAFELC-LVATTSFSGDLLFYRITREDETK-----KVIFEKLDLLDSDMKKHSFWALKWG 130 (397)
T ss_dssp EEECCTTCEEEEEEEEEEETTTEEEE-EEEEEETTSCEEEEEEEECTTTC-----CEEEEEECCSCTTGGGSCEEEEEEE
T ss_pred EEecCCCcEEEEEEecccccCCcccc-EEEEEcCCCCEEEEEccCCcccc-----cccceeecccccccCCCcEEEEEEe
Confidence 34489999999999998 5 5 89999999999999998721100 0115677788 5899999999
Q ss_pred ----CCCCce-EEEEeCCCcEEEEeCCC------CCCCCcccceeee-------ecCCccEeeEEEecCCCcEEEEEeCC
Q 014454 188 ----KFKEGH-LLSGSDDAQICLWDINA------APKNKSLEAMQIF-------KVHEGVVEDVAWHLRHEYLFGSVGDD 249 (424)
Q Consensus 188 ----~~~~~~-l~s~~~dg~i~iwd~~~------~~~~~~~~~~~~~-------~~~~~~v~~~~~~~~~~~~~~s~~~d 249 (424)
|++. + |++++.||.|++||+.. ..... +.+...+ ..|...|.+++|+|++ ++++++.|
T Consensus 131 ~~~~~~~~-~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--~l~~~~~d 206 (397)
T 1sq9_A 131 ASNDRLLS-HRLVATDVKGTTYIWKFHPFADESNSLTLN-WSPTLELQGTVESPMTPSQFATSVDISERG--LIATGFNN 206 (397)
T ss_dssp CCC----C-EEEEEEETTSCEEEEEEESSSSHHHHTTTC-CCCEEEEEEEECCSSSSCCCCCEEEECTTS--EEEEECTT
T ss_pred eccCCCCc-eEEEEEeCCCcEEEEeCCccccccccceee-ccCcceeeeeeccccCCCCCceEEEECCCc--eEEEEeCC
Confidence 8887 7 99999999999999987 43322 1111234 3488899999999998 67799999
Q ss_pred CeEEEEEcCCCCCCCCeeeeec---c---CCCeeEEEecCCCCeEEEEEeCC---CcEEEEECCCCCCcceEecC-----
Q 014454 250 QYLLIWDLRTPSVSKPVQSVVA---H---QSEVNCLAFNPFNEWILATGSTD---KTVKLFDLRKISTALHTFDS----- 315 (424)
Q Consensus 250 g~i~i~d~~~~~~~~~~~~~~~---~---~~~v~~v~~~~~~~~~l~tg~~d---g~i~iwd~~~~~~~~~~~~~----- 315 (424)
|.|++||++++. .+..+.. | ...|.+++|+|++. +|++++.| |.|++||+++ .+++..+..
T Consensus 207 g~i~i~d~~~~~---~~~~~~~~~~h~~~~~~i~~i~~~~~~~-~l~~~~~d~~~g~i~i~d~~~-~~~~~~~~~~~~~~ 281 (397)
T 1sq9_A 207 GTVQISELSTLR---PLYNFESQHSMINNSNSIRSVKFSPQGS-LLAIAHDSNSFGCITLYETEF-GERIGSLSVPTHSS 281 (397)
T ss_dssp SEEEEEETTTTE---EEEEEECCC---CCCCCEEEEEECSSTT-EEEEEEEETTEEEEEEEETTT-CCEEEEECBC----
T ss_pred CcEEEEECCCCc---eeEEEeccccccccCCccceEEECCCCC-EEEEEecCCCCceEEEEECCC-CcccceeccCcccc
Confidence 999999999865 3667777 8 99999999999988 68899999 9999999998 678888888
Q ss_pred --------CCCCEEEEEEcCCCCcEEEEEECCCeEEEeeCCCCCcccCCCCcCCCCCeeeEEEc------CC--------
Q 014454 316 --------HKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPEDAEDGPPELLFIHG------GH-------- 373 (424)
Q Consensus 316 --------h~~~v~~~~~sp~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~------~h-------- 373 (424)
|...|.+++|+|++. +|++++.||.|+|||++.. ..+..+. +|
T Consensus 282 ~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~dg~i~iwd~~~~--------------~~~~~~~~~~~~~~~~~~~~~g~ 346 (397)
T 1sq9_A 282 QASLGEFAHSSWVMSLSFNDSGE-TLCSAGWDGKLRFWDVKTK--------------ERITTLNMHCDDIEIEEDILAVD 346 (397)
T ss_dssp ----CCBSBSSCEEEEEECSSSS-EEEEEETTSEEEEEETTTT--------------EEEEEEECCGGGCSSGGGCCCBC
T ss_pred cccccccccCCcEEEEEECCCCC-EEEEEeCCCeEEEEEcCCC--------------ceeEEEecccCcccchhhhhccc
Confidence 999999999999996 7999999999999999875 4555666 66
Q ss_pred -------CCCcceEEeCCCC----------CcEEEEEeCCCcEEEEecCCc
Q 014454 374 -------TSKISDFSWNPCE----------DWVISSVAEDNILQIWQMAEN 407 (424)
Q Consensus 374 -------~~~v~~~~~~~~~----------~~~l~s~~~dg~i~vw~~~~~ 407 (424)
...|++++|+|++ + +|++++.||.|++|++.++
T Consensus 347 ~~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~-~l~s~~~dg~i~iw~~~~g 396 (397)
T 1sq9_A 347 EHGDSLAEPGVFDVKFLKKGWRSGMGADLNE-SLCCVCLDRSIRWFREAGG 396 (397)
T ss_dssp TTSCBCSSCCEEEEEEECTTTSBSTTCTTSC-EEEEEETTTEEEEEEEEC-
T ss_pred cccccccCCceeEEEeccccccccccccccc-eEEEecCCCcEEEEEcCCC
Confidence 8999999999998 5 7999999999999999875
No 49
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=100.00 E-value=1.6e-33 Score=257.53 Aligned_cols=247 Identities=16% Similarity=0.241 Sum_probs=208.2
Q ss_pred EEEEEeccCCceeEEEecCCCCcEEEEEeCCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCceeEEEecCCCCceEEE
Q 014454 117 QIIQQINHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLS 196 (424)
Q Consensus 117 ~~~~~~~h~~~v~~~~~~p~~~~~latg~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s 196 (424)
.......|...|.+++|+|++. +|++++.||.|++|++.. ........+..|...|.+++|+|++. +|++
T Consensus 89 ~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~i~~~d~~~--------~~~~~~~~~~~~~~~i~~~~~~~~~~-~l~~ 158 (337)
T 1gxr_A 89 SQLDCLNRDNYIRSCKLLPDGC-TLIVGGEASTLSIWDLAA--------PTPRIKAELTSSAPACYALAISPDSK-VCFS 158 (337)
T ss_dssp EEEECSCTTSBEEEEEECTTSS-EEEEEESSSEEEEEECCC--------C--EEEEEEECSSSCEEEEEECTTSS-EEEE
T ss_pred ecccccCCCCcEEEEEEcCCCC-EEEEEcCCCcEEEEECCC--------CCcceeeecccCCCceEEEEECCCCC-EEEE
Confidence 3334447999999999999886 899999999999999987 22234567788999999999999887 7999
Q ss_pred EeCCCcEEEEeCCCCCCCCcccceeeeecCCccEeeEEEecCCCcEEEEEeCCCeEEEEEcCCCCCCCCeeeeeccCCCe
Q 014454 197 GSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEV 276 (424)
Q Consensus 197 ~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v 276 (424)
++.||.|++||++++ .....+..|...|.+++|+|++. .+++++.||.|++||+++++. +.. ..+...+
T Consensus 159 ~~~dg~v~~~d~~~~------~~~~~~~~~~~~i~~~~~~~~~~-~l~~~~~dg~i~~~d~~~~~~---~~~-~~~~~~v 227 (337)
T 1gxr_A 159 CCSDGNIAVWDLHNQ------TLVRQFQGHTDGASCIDISNDGT-KLWTGGLDNTVRSWDLREGRQ---LQQ-HDFTSQI 227 (337)
T ss_dssp EETTSCEEEEETTTT------EEEEEECCCSSCEEEEEECTTSS-EEEEEETTSEEEEEETTTTEE---EEE-EECSSCE
T ss_pred EeCCCcEEEEeCCCC------ceeeeeecccCceEEEEECCCCC-EEEEEecCCcEEEEECCCCce---Eee-ecCCCce
Confidence 999999999999865 34566778999999999999986 566999999999999998653 333 3478899
Q ss_pred eEEEecCCCCeEEEEEeCCCcEEEEECCCCCCcceEecCCCCCEEEEEEcCCCCcEEEEEECCCeEEEeeCCCCCcccCC
Q 014454 277 NCLAFNPFNEWILATGSTDKTVKLFDLRKISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTP 356 (424)
Q Consensus 277 ~~v~~~~~~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~l~s~~~dg~i~iwd~~~~~~~~~~ 356 (424)
.+++|+|++. +|++++.++.|++||++.. ....+..|...|.+++|+|+++ +|++++.||.|++||+....
T Consensus 228 ~~~~~s~~~~-~l~~~~~~~~i~~~~~~~~--~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~dg~i~~~~~~~~~----- 298 (337)
T 1gxr_A 228 FSLGYCPTGE-WLAVGMESSNVEVLHVNKP--DKYQLHLHESCVLSLKFAYCGK-WFVSTGKDNLLNAWRTPYGA----- 298 (337)
T ss_dssp EEEEECTTSS-EEEEEETTSCEEEEETTSS--CEEEECCCSSCEEEEEECTTSS-EEEEEETTSEEEEEETTTCC-----
T ss_pred EEEEECCCCC-EEEEEcCCCcEEEEECCCC--CeEEEcCCccceeEEEECCCCC-EEEEecCCCcEEEEECCCCe-----
Confidence 9999999998 6899999999999999973 3457788999999999999996 79999999999999998753
Q ss_pred CCcCCCCCeeeEEEcCCCCCcceEEeCCCCCcEEEEEeCCCcEEEEec
Q 014454 357 EDAEDGPPELLFIHGGHTSKISDFSWNPCEDWVISSVAEDNILQIWQM 404 (424)
Q Consensus 357 ~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~vw~~ 404 (424)
.+. ...|...|.+++|+|+++ +|++++.||.|++|++
T Consensus 299 ---------~~~-~~~~~~~v~~~~~s~~~~-~l~~~~~dg~i~iw~~ 335 (337)
T 1gxr_A 299 ---------SIF-QSKESSSVLSCDISVDDK-YIVTGSGDKKATVYEV 335 (337)
T ss_dssp ---------EEE-EEECSSCEEEEEECTTSC-EEEEEETTSCEEEEEE
T ss_pred ---------EEE-EecCCCcEEEEEECCCCC-EEEEecCCCeEEEEEE
Confidence 222 235778899999999999 6899999999999997
No 50
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=100.00 E-value=2.3e-36 Score=281.34 Aligned_cols=256 Identities=13% Similarity=0.169 Sum_probs=200.9
Q ss_pred ccCCceeEEEecCCCCcEEEEEeCCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCceeEEEecCCCCceEEEEeCCCc
Q 014454 123 NHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDDAQ 202 (424)
Q Consensus 123 ~h~~~v~~~~~~p~~~~~latg~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~ 202 (424)
.|.+.|++++|+|++. +||+|+.||.|+||++.. ........+.+|...|.+++|+|++. +|++++.||.
T Consensus 9 ~~~~~v~~~~~s~~g~-~l~~~~~d~~i~iw~~~~--------~~~~~~~~~~~h~~~v~~~~~s~~~~-~l~s~s~d~~ 78 (377)
T 3dwl_C 9 ILPKPSYEHAFNSQRT-EFVTTTATNQVELYEQDG--------NGWKHARTFSDHDKIVTCVDWAPKSN-RIVTCSQDRN 78 (377)
T ss_dssp ECSSCCSCCEECSSSS-EEECCCSSSCBCEEEEET--------TEEEECCCBCCCSSCEEEEEECTTTC-CEEEEETTSS
T ss_pred cCCCcEEEEEECCCCC-EEEEecCCCEEEEEEccC--------CceEEEEEEecCCceEEEEEEeCCCC-EEEEEeCCCe
Confidence 3678999999999886 899999999999999986 11144556788999999999999887 7999999999
Q ss_pred EEEEeCCCCCCCCcccceeeeecCCccEeeEEEecCCCcEEEEEeCCCeEEEEEcCCCCCCCCeeeeec-cCCCeeEEEe
Q 014454 203 ICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVA-HQSEVNCLAF 281 (424)
Q Consensus 203 i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~dg~i~i~d~~~~~~~~~~~~~~~-~~~~v~~v~~ 281 (424)
|++||+.++. .......+..|...|.+++|+|++. +|++++.|+.|++||++.+........+.. |...|++++|
T Consensus 79 v~vwd~~~~~---~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~ 154 (377)
T 3dwl_C 79 AYVYEKRPDG---TWKQTLVLLRLNRAATFVRWSPNED-KFAVGSGARVISVCYFEQENDWWVSKHLKRPLRSTILSLDW 154 (377)
T ss_dssp EEEC---------CCCCEEECCCCSSCEEEEECCTTSS-CCEEEESSSCEEECCC-----CCCCEEECSSCCSCEEEEEE
T ss_pred EEEEEcCCCC---ceeeeeEecccCCceEEEEECCCCC-EEEEEecCCeEEEEEECCcccceeeeEeecccCCCeEEEEE
Confidence 9999998764 1234555677999999999999887 456999999999999998764334566666 9999999999
Q ss_pred cCCCCeEEEEEeCCCcEEEEECCCC-----------------CCcceEecCCCCCEEEEEEcCCCCcEEEEEECCCeEEE
Q 014454 282 NPFNEWILATGSTDKTVKLFDLRKI-----------------STALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMV 344 (424)
Q Consensus 282 ~~~~~~~l~tg~~dg~i~iwd~~~~-----------------~~~~~~~~~h~~~v~~~~~sp~~~~~l~s~~~dg~i~i 344 (424)
+|++. +|++|+.|+.|++||++.. +.++..+ .|...|.+++|+|++. +|++++.||.|++
T Consensus 155 ~~~~~-~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~sp~~~-~l~~~~~d~~i~i 231 (377)
T 3dwl_C 155 HPNNV-LLAAGCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY-PSGGWVHAVGFSPSGN-ALAYAGHDSSVTI 231 (377)
T ss_dssp CTTSS-EEEEEESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC-CCSSSEEEEEECTTSS-CEEEEETTTEEC-
T ss_pred cCCCC-EEEEEeCCCEEEEEEEEecccCCCccccccccccchhhhhhcc-cCCceEEEEEECCCCC-EEEEEeCCCcEEE
Confidence 99887 6999999999999998631 2345556 8999999999999996 7999999999999
Q ss_pred eeCCCCCcccCCCCcCCCCCeeeEEEcCCCCCcceEEeCCCCCcEEEEEeCCCcEEEEecCCc
Q 014454 345 WDLSRIDEEQTPEDAEDGPPELLFIHGGHTSKISDFSWNPCEDWVISSVAEDNILQIWQMAEN 407 (424)
Q Consensus 345 wd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~ 407 (424)
||++.... ++.++..+.+|...|.+++|+|+++ +|++++.++. .+|+...+
T Consensus 232 wd~~~~~~----------~~~~~~~~~~~~~~v~~~~~s~~~~-~l~~~~~~~~-~~~~~~~~ 282 (377)
T 3dwl_C 232 AYPSAPEQ----------PPRALITVKLSQLPLRSLLWANESA-IVAAGYNYSP-ILLQGNES 282 (377)
T ss_dssp CEECSTTS----------CEEECCCEECSSSCEEEEEEEETTE-EEEEESSSSE-EEECCCC-
T ss_pred EECCCCCC----------cceeeEeecCCCCceEEEEEcCCCC-EEEEEcCCcE-EEEEeCCC
Confidence 99987542 1123566778999999999999998 6888776664 57777644
No 51
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.4e-34 Score=270.40 Aligned_cols=243 Identities=17% Similarity=0.296 Sum_probs=209.5
Q ss_pred ccCCceeEEEecCCCCcEEEEEeCCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCceeEEEecCCCCceEEEEeCCCc
Q 014454 123 NHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDDAQ 202 (424)
Q Consensus 123 ~h~~~v~~~~~~p~~~~~latg~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~ 202 (424)
.|.+.|++++|+|++. +||+|+.||.|++|+.. ......+.+|...|.+++|+|++. +|++++.||.
T Consensus 106 ~~~~~v~~~~~s~~~~-~l~~~~~dg~i~i~~~~-----------~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~ 172 (425)
T 1r5m_A 106 KTTNQVTCLAWSHDGN-SIVTGVENGELRLWNKT-----------GALLNVLNFHRAPIVSVKWNKDGT-HIISMDVENV 172 (425)
T ss_dssp --CBCEEEEEECTTSS-EEEEEETTSCEEEEETT-----------SCEEEEECCCCSCEEEEEECTTSS-EEEEEETTCC
T ss_pred CCCCceEEEEEcCCCC-EEEEEeCCCeEEEEeCC-----------CCeeeeccCCCccEEEEEECCCCC-EEEEEecCCe
Confidence 3678999999999886 89999999999999943 355677889999999999999887 7999999999
Q ss_pred EEEEeCCCCCCCCcccceeeeecCCcc---------------EeeEEEecCCCcEEEEEeCCCeEEEEEcCCCCCCCCee
Q 014454 203 ICLWDINAAPKNKSLEAMQIFKVHEGV---------------VEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQ 267 (424)
Q Consensus 203 i~iwd~~~~~~~~~~~~~~~~~~~~~~---------------v~~~~~~~~~~~~~~s~~~dg~i~i~d~~~~~~~~~~~ 267 (424)
|++||+.++. .+..+..+... +.+++|++++ .+++++.+|.|++||++++. .+.
T Consensus 173 i~iwd~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~g~i~~~d~~~~~---~~~ 241 (425)
T 1r5m_A 173 TILWNVISGT------VMQHFELKETGGSSINAENHSGDGSLGVDVEWVDDD--KFVIPGPKGAIFVYQITEKT---PTG 241 (425)
T ss_dssp EEEEETTTTE------EEEEECCC---------------CCCBSCCEEEETT--EEEEECGGGCEEEEETTCSS---CSE
T ss_pred EEEEECCCCc------EEEEeeccccCccceeeccccCCcceeeEEEEcCCC--EEEEEcCCCeEEEEEcCCCc---eee
Confidence 9999997663 34444445555 9999999975 46689999999999999865 366
Q ss_pred eeeccCCCeeEEEecCCCCeEEEEEeCCCcEEEEECCCCCCcceEecCCCCCEEEEEEcCCCCcEEEEEECCCeEEEeeC
Q 014454 268 SVVAHQSEVNCLAFNPFNEWILATGSTDKTVKLFDLRKISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDL 347 (424)
Q Consensus 268 ~~~~~~~~v~~v~~~~~~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~l~s~~~dg~i~iwd~ 347 (424)
.+..|...|.+++|+|++. +|++++.||.|++||+++ ..++..+..|...|.+++|+|++ ++++++.|+.|++||+
T Consensus 242 ~~~~~~~~i~~~~~~~~~~-~l~~~~~d~~i~i~d~~~-~~~~~~~~~~~~~i~~~~~~~~~--~l~~~~~d~~i~i~d~ 317 (425)
T 1r5m_A 242 KLIGHHGPISVLEFNDTNK-LLLSASDDGTLRIWHGGN-GNSQNCFYGHSQSIVSASWVGDD--KVISCSMDGSVRLWSL 317 (425)
T ss_dssp EECCCSSCEEEEEEETTTT-EEEEEETTSCEEEECSSS-BSCSEEECCCSSCEEEEEEETTT--EEEEEETTSEEEEEET
T ss_pred eeccCCCceEEEEECCCCC-EEEEEcCCCEEEEEECCC-CccceEecCCCccEEEEEECCCC--EEEEEeCCCcEEEEEC
Confidence 7778999999999999988 699999999999999998 67888899999999999999988 7999999999999999
Q ss_pred CCCCcccCCCCcCCCCCeeeEEEcCCCCCcceEEeCCCCCcEEEEEeCCCcEEEEecCCcc
Q 014454 348 SRIDEEQTPEDAEDGPPELLFIHGGHTSKISDFSWNPCEDWVISSVAEDNILQIWQMAENI 408 (424)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~ 408 (424)
+.. ..+..+..|...|.+++|+|+++ +|++++.||.|++|++.++.
T Consensus 318 ~~~--------------~~~~~~~~~~~~i~~~~~s~~~~-~l~~~~~dg~i~i~~~~~~~ 363 (425)
T 1r5m_A 318 KQN--------------TLLALSIVDGVPIFAGRISQDGQ-KYAVAFMDGQVNVYDLKKLN 363 (425)
T ss_dssp TTT--------------EEEEEEECTTCCEEEEEECTTSS-EEEEEETTSCEEEEECHHHH
T ss_pred CCC--------------cEeEecccCCccEEEEEEcCCCC-EEEEEECCCeEEEEECCCCc
Confidence 874 56777788999999999999999 78999999999999998764
No 52
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=100.00 E-value=6.2e-34 Score=279.95 Aligned_cols=242 Identities=26% Similarity=0.454 Sum_probs=212.4
Q ss_pred EeccCCceeEEEecCCCCcEEEEEeCCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCceeEEEecCCCCceEEEEeCC
Q 014454 121 QINHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDD 200 (424)
Q Consensus 121 ~~~h~~~v~~~~~~p~~~~~latg~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~d 200 (424)
..+|.+.|.+++|+|++. +|++++.||.|++|+... .....+.+|...+.+++|+|++. +|++|+.|
T Consensus 299 ~~~h~~~v~~~~~~~~~~-~l~t~~~d~~i~~w~~~~-----------~~~~~~~~~~~~v~~~~~s~~g~-~l~~~~~d 365 (577)
T 2ymu_A 299 LTGHSSSVWGVAFSPDGQ-TIASASDDKTVKLWNRNG-----------QHLQTLTGHSSSVWGVAFSPDGQ-TIASASDD 365 (577)
T ss_dssp ECCCSSCEEEEEECTTSS-EEEEEETTSCEEEEETTS-----------CEEEEECCCSSCEEEEEECTTSS-EEEEEETT
T ss_pred EecCCCCeEEEEECCCCC-EEEEEeCCCeEEEEeCCC-----------CeeEEEeCCCCCEEEEEECCCCC-EEEEEeCC
Confidence 457999999999999886 899999999999999865 34567889999999999999988 79999999
Q ss_pred CcEEEEeCCCCCCCCcccceeeeecCCccEeeEEEecCCCcEEEEEeCCCeEEEEEcCCCCCCCCeeeeeccCCCeeEEE
Q 014454 201 AQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLA 280 (424)
Q Consensus 201 g~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~v~ 280 (424)
|.|++||... ..+..+.+|...|.+++|+|++.. |++++.|+.|++||... +.+..+..|...|++++
T Consensus 366 g~v~~~~~~~-------~~~~~~~~~~~~v~~~~~s~dg~~-l~~~~~d~~v~~~~~~~----~~~~~~~~~~~~v~~~~ 433 (577)
T 2ymu_A 366 KTVKLWNRNG-------QLLQTLTGHSSSVRGVAFSPDGQT-IASASDDKTVKLWNRNG----QLLQTLTGHSSSVWGVA 433 (577)
T ss_dssp SEEEEEETTC-------CEEEEEECCSSCEEEEEECTTSSC-EEEEETTSEEEEECTTC----CEEEEEECCSSCEEEEE
T ss_pred CEEEEEcCCC-------CEEEEecCCCCCeEEEEECCCCCE-EEEEeCCCEEEEEeCCC----CEEEEecCCCCCeEEEE
Confidence 9999999643 245667889999999999999875 56999999999999643 24677889999999999
Q ss_pred ecCCCCeEEEEEeCCCcEEEEECCCCCCcceEecCCCCCEEEEEEcCCCCcEEEEEECCCeEEEeeCCCCCcccCCCCcC
Q 014454 281 FNPFNEWILATGSTDKTVKLFDLRKISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPEDAE 360 (424)
Q Consensus 281 ~~~~~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~ 360 (424)
|+|++. +|++++.|+.|++||+. ++.+..+.+|...|++++|+|++. +|++++.|+.|+|||...
T Consensus 434 ~s~d~~-~l~~~~~d~~v~~w~~~--~~~~~~~~~~~~~v~~~~~spd~~-~las~~~d~~i~iw~~~~----------- 498 (577)
T 2ymu_A 434 FSPDDQ-TIASASDDKTVKLWNRN--GQLLQTLTGHSSSVRGVAFSPDGQ-TIASASDDKTVKLWNRNG----------- 498 (577)
T ss_dssp ECTTSS-EEEEEETTSEEEEEETT--SCEEEEEECCSSCEEEEEECTTSC-EEEEEETTSEEEEEETTS-----------
T ss_pred ECCCCC-EEEEEcCCCEEEEEECC--CCEEEEEcCCCCCEEEEEEcCCCC-EEEEEeCCCEEEEEcCCC-----------
Confidence 999998 69999999999999975 577888999999999999999996 799999999999999643
Q ss_pred CCCCeeeEEEcCCCCCcceEEeCCCCCcEEEEEeCCCcEEEEecCCc
Q 014454 361 DGPPELLFIHGGHTSKISDFSWNPCEDWVISSVAEDNILQIWQMAEN 407 (424)
Q Consensus 361 ~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~ 407 (424)
+++..+.+|...|++++|+|+++ +|++++.||.|+|||....
T Consensus 499 ----~~~~~~~~h~~~v~~l~~s~dg~-~l~s~~~dg~v~lwd~~~~ 540 (577)
T 2ymu_A 499 ----QLLQTLTGHSSSVRGVAFSPDGQ-TIASASDDKTVKLWNRNGQ 540 (577)
T ss_dssp ----CEEEEEECCSSCEEEEEECTTSS-CEEEEETTSEEEEECTTSC
T ss_pred ----CEEEEEeCCCCCEEEEEEcCCCC-EEEEEECcCEEEEEeCCCC
Confidence 56778889999999999999999 5899999999999997544
No 53
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=100.00 E-value=1.1e-33 Score=258.42 Aligned_cols=257 Identities=21% Similarity=0.293 Sum_probs=215.5
Q ss_pred cEEEEEEeccCCceeEEEecCCCCcEEEEEeCCCeEEEEeCCCCCCCCCCCCCCCCcEEEe--cCCCceeEEEecCCCCc
Q 014454 115 KVQIIQQINHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLR--GHSTEGYGLSWSKFKEG 192 (424)
Q Consensus 115 ~~~~~~~~~h~~~v~~~~~~p~~~~~latg~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~--~h~~~v~~l~~~~~~~~ 192 (424)
.......+.|.+.|++++|+|++. +|++++ ||.|++|++.... .......+. +|...|.+++|+|++.
T Consensus 41 ~~~~~~~~~h~~~v~~~~~~~~~~-~l~~~~-dg~i~iw~~~~~~-------~~~~~~~~~~~~~~~~v~~~~~~~~~~- 110 (337)
T 1gxr_A 41 HARQINTLNHGEVVCAVTISNPTR-HVYTGG-KGCVKVWDISHPG-------NKSPVSQLDCLNRDNYIRSCKLLPDGC- 110 (337)
T ss_dssp EEEEEEEECCSSCCCEEEECSSSS-EEEEEC-BSEEEEEETTSTT-------CCSCSEEEECSCTTSBEEEEEECTTSS-
T ss_pred ccccceeccCCCceEEEEEecCCc-EEEEcC-CCeEEEEECCCCC-------ceeeeecccccCCCCcEEEEEEcCCCC-
Confidence 455566779999999999999886 788888 9999999998621 122334444 7999999999999887
Q ss_pred eEEEEeCCCcEEEEeCCCCCCCCcccceeeeecCCccEeeEEEecCCCcEEEEEeCCCeEEEEEcCCCCCCCCeeeeecc
Q 014454 193 HLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAH 272 (424)
Q Consensus 193 ~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~dg~i~i~d~~~~~~~~~~~~~~~~ 272 (424)
+|++++.||.|++||+..... .....+..|...|.+++|+|++. ++++++.||.|++||+++++ .+..+..|
T Consensus 111 ~l~~~~~d~~i~~~d~~~~~~----~~~~~~~~~~~~i~~~~~~~~~~-~l~~~~~dg~v~~~d~~~~~---~~~~~~~~ 182 (337)
T 1gxr_A 111 TLIVGGEASTLSIWDLAAPTP----RIKAELTSSAPACYALAISPDSK-VCFSCCSDGNIAVWDLHNQT---LVRQFQGH 182 (337)
T ss_dssp EEEEEESSSEEEEEECCCC------EEEEEEECSSSCEEEEEECTTSS-EEEEEETTSCEEEEETTTTE---EEEEECCC
T ss_pred EEEEEcCCCcEEEEECCCCCc----ceeeecccCCCceEEEEECCCCC-EEEEEeCCCcEEEEeCCCCc---eeeeeecc
Confidence 799999999999999987632 23455677899999999999886 55699999999999999865 36777789
Q ss_pred CCCeeEEEecCCCCeEEEEEeCCCcEEEEECCCCCCcceEecCCCCCEEEEEEcCCCCcEEEEEECCCeEEEeeCCCCCc
Q 014454 273 QSEVNCLAFNPFNEWILATGSTDKTVKLFDLRKISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDE 352 (424)
Q Consensus 273 ~~~v~~v~~~~~~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~l~s~~~dg~i~iwd~~~~~~ 352 (424)
...+.+++|+|++. +|++++.||.|++||+++ .+.+..+. +...+.+++|+|++. +|++++.|+.|++||++...
T Consensus 183 ~~~i~~~~~~~~~~-~l~~~~~dg~i~~~d~~~-~~~~~~~~-~~~~v~~~~~s~~~~-~l~~~~~~~~i~~~~~~~~~- 257 (337)
T 1gxr_A 183 TDGASCIDISNDGT-KLWTGGLDNTVRSWDLRE-GRQLQQHD-FTSQIFSLGYCPTGE-WLAVGMESSNVEVLHVNKPD- 257 (337)
T ss_dssp SSCEEEEEECTTSS-EEEEEETTSEEEEEETTT-TEEEEEEE-CSSCEEEEEECTTSS-EEEEEETTSCEEEEETTSSC-
T ss_pred cCceEEEEECCCCC-EEEEEecCCcEEEEECCC-CceEeeec-CCCceEEEEECCCCC-EEEEEcCCCcEEEEECCCCC-
Confidence 99999999999987 689999999999999998 56665554 688999999999996 78999999999999998742
Q ss_pred ccCCCCcCCCCCeeeEEEcCCCCCcceEEeCCCCCcEEEEEeCCCcEEEEecCCccC
Q 014454 353 EQTPEDAEDGPPELLFIHGGHTSKISDFSWNPCEDWVISSVAEDNILQIWQMAENIY 409 (424)
Q Consensus 353 ~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~ 409 (424)
......|...|.+++|+|+++ +|++++.||.|++|++.++..
T Consensus 258 --------------~~~~~~~~~~v~~~~~~~~~~-~l~~~~~dg~i~~~~~~~~~~ 299 (337)
T 1gxr_A 258 --------------KYQLHLHESCVLSLKFAYCGK-WFVSTGKDNLLNAWRTPYGAS 299 (337)
T ss_dssp --------------EEEECCCSSCEEEEEECTTSS-EEEEEETTSEEEEEETTTCCE
T ss_pred --------------eEEEcCCccceeEEEECCCCC-EEEEecCCCcEEEEECCCCeE
Confidence 345678999999999999999 689999999999999987643
No 54
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=100.00 E-value=2.1e-34 Score=267.21 Aligned_cols=307 Identities=16% Similarity=0.172 Sum_probs=230.6
Q ss_pred CCccEEEEccCCCCCCCCCCceEEEEEeecCCCCCCCeEEEEEEECCCCCCCcccCCCCCcCCCCCCCCCCCCcEEEEEE
Q 014454 42 WPSLTVEWLPDREEPPGKDYSVQKMILGTHTSENEPNYLMLAQVQLPLDDSENDARHYDDDRSDFGGFGCANGKVQIIQQ 121 (424)
Q Consensus 42 ~p~~~~~~~p~~~~~~~~~~~~~~~~~gt~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 121 (424)
-|..++.|.|+. ..++.|+ .++.++++.+.- ++++....
T Consensus 9 ~~i~~~~~s~~~----------~~l~~~~-----~d~~v~i~~~~~--------------------------~~~~~~~~ 47 (372)
T 1k8k_C 9 EPISCHAWNKDR----------TQIAICP-----NNHEVHIYEKSG--------------------------NKWVQVHE 47 (372)
T ss_dssp SCCCEEEECTTS----------SEEEEEC-----SSSEEEEEEEET--------------------------TEEEEEEE
T ss_pred CCeEEEEECCCC----------CEEEEEe-----CCCEEEEEeCCC--------------------------CcEEeeee
Confidence 457789999875 4565554 356788887731 12223333
Q ss_pred -eccCCceeEEEecCCCCcEEEEEeCCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCceeEEEecCCCCceEEEEeCC
Q 014454 122 -INHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDD 200 (424)
Q Consensus 122 -~~h~~~v~~~~~~p~~~~~latg~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~d 200 (424)
..|.+.|++++|+|++. +|++|+.||.|++||+.. ........+..|...|.+++|+|++. +|++++.|
T Consensus 48 ~~~h~~~v~~~~~~~~~~-~l~~~~~dg~i~vwd~~~--------~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~d 117 (372)
T 1k8k_C 48 LKEHNGQVTGVDWAPDSN-RIVTCGTDRNAYVWTLKG--------RTWKPTLVILRINRAARCVRWAPNEK-KFAVGSGS 117 (372)
T ss_dssp EECCSSCEEEEEEETTTT-EEEEEETTSCEEEEEEET--------TEEEEEEECCCCSSCEEEEEECTTSS-EEEEEETT
T ss_pred ecCCCCcccEEEEeCCCC-EEEEEcCCCeEEEEECCC--------CeeeeeEEeecCCCceeEEEECCCCC-EEEEEeCC
Confidence 36999999999999886 899999999999999976 22223344567999999999999887 79999999
Q ss_pred CcEEEEeCCCCCCCCcccceeeeecCCccEeeEEEecCCCcEEEEEeCCCeEEEEEcCCCC---------------CCCC
Q 014454 201 AQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPS---------------VSKP 265 (424)
Q Consensus 201 g~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~dg~i~i~d~~~~~---------------~~~~ 265 (424)
|.|++||++....... .......|...|.+++|+|++. +|++++.||.|++||++... ....
T Consensus 118 ~~v~i~d~~~~~~~~~--~~~~~~~~~~~i~~~~~~~~~~-~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~ 194 (372)
T 1k8k_C 118 RVISICYFEQENDWWV--CKHIKKPIRSTVLSLDWHPNSV-LLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGEL 194 (372)
T ss_dssp SSEEEEEEETTTTEEE--EEEECTTCCSCEEEEEECTTSS-EEEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCE
T ss_pred CEEEEEEecCCCccee--eeeeecccCCCeeEEEEcCCCC-EEEEEcCCCCEEEEEcccccccccccccccccccchhhh
Confidence 9999999987632111 1222356889999999999886 56799999999999975321 1234
Q ss_pred eeeeeccCCCeeEEEecCCCCeEEEEEeCCCcEEEEECCCCCCcceEecCCCCCEEEEEEcCCCCcEEEEEECCCeEEEe
Q 014454 266 VQSVVAHQSEVNCLAFNPFNEWILATGSTDKTVKLFDLRKISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVW 345 (424)
Q Consensus 266 ~~~~~~~~~~v~~v~~~~~~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~l~s~~~dg~i~iw 345 (424)
+..+..|...|++++|+|++. +|++++.||.|++||+++ ++++..+..|...|.+++|+|++. +|+++ .|+.|++|
T Consensus 195 ~~~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~i~i~d~~~-~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~-~d~~i~i~ 270 (372)
T 1k8k_C 195 MFESSSSCGWVHGVCFSANGS-RVAWVSHDSTVCLADADK-KMAVATLASETLPLLAVTFITESS-LVAAG-HDCFPVLF 270 (372)
T ss_dssp EEECCCCSSCEEEEEECSSSS-EEEEEETTTEEEEEEGGG-TTEEEEEECSSCCEEEEEEEETTE-EEEEE-TTSSCEEE
T ss_pred eEecCCCCCeEEEEEECCCCC-EEEEEeCCCEEEEEECCC-CceeEEEccCCCCeEEEEEecCCC-EEEEE-eCCeEEEE
Confidence 666678999999999999987 699999999999999998 678899999999999999999985 66666 99999999
Q ss_pred eCCC--CC--cccCCCCcC----------------CCCCee-------eEEEcCCCCCcceEEeC-CCC---CcEEEEEe
Q 014454 346 DLSR--ID--EEQTPEDAE----------------DGPPEL-------LFIHGGHTSKISDFSWN-PCE---DWVISSVA 394 (424)
Q Consensus 346 d~~~--~~--~~~~~~~~~----------------~~~~~~-------~~~~~~h~~~v~~~~~~-~~~---~~~l~s~~ 394 (424)
+++. +. ......... +..... .....+|...|++++|+ +++ . +|+|++
T Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~g~~~~-~l~s~~ 349 (372)
T 1k8k_C 271 TYDSAAGKLSFGGRLDVPKQSSQRGLTARERFQNLDKKASSEGSAAAGAGLDSLHKNSVSQISVLSGGKAKCS-QFCTTG 349 (372)
T ss_dssp EEETTTTEEEECCCCCCC--------CHHHHHHHCCCCC---------CCCSSSSSSCEEEEEEEESTTTSCS-EEEEEE
T ss_pred EccCcCceEEEeeccCccccchhhhcchhhhhhhcccccccccCccccccccccccCCcceeEEecCCCccee-eEEEec
Confidence 9987 31 000000000 000011 11225899999999977 555 6 799999
Q ss_pred CCCcEEEEecCCc
Q 014454 395 EDNILQIWQMAEN 407 (424)
Q Consensus 395 ~dg~i~vw~~~~~ 407 (424)
.||.|++|++.++
T Consensus 350 ~Dg~i~~W~~~~~ 362 (372)
T 1k8k_C 350 MDGGMSIWDVRSL 362 (372)
T ss_dssp TTSEEEEEEHHHH
T ss_pred CCCceEEEEecCh
Confidence 9999999999764
No 55
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=100.00 E-value=4.1e-35 Score=271.48 Aligned_cols=309 Identities=13% Similarity=0.123 Sum_probs=219.0
Q ss_pred hcCCCCCccEEEEccCCCCCCCCCCceEEEEEeec--CCCCCCCeEEEEEEECCCCCCCcccCCCCCcCCCCCCCCCCCC
Q 014454 37 THALEWPSLTVEWLPDREEPPGKDYSVQKMILGTH--TSENEPNYLMLAQVQLPLDDSENDARHYDDDRSDFGGFGCANG 114 (424)
Q Consensus 37 ~~~~~~p~~~~~~~p~~~~~~~~~~~~~~~~~gt~--~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 114 (424)
.+.+.+|.++++|.|+. +.++.|.. +..+.+|.|.++.+......... ...
T Consensus 10 ~~~~g~PV~sv~fs~dg----------~~l~sGGg~~~~sGi~N~i~~w~~~~~~~~~~~-----------------~~~ 62 (365)
T 4h5i_A 10 SYNVGYPAYGAKFLNND----------TLLVAGGGGEGNNGIPNKLTVLRVDPTKDTEKE-----------------QFH 62 (365)
T ss_dssp EEECSSCEEEEEEEETT----------EEEEEEECCSSSSSCCEEEEEEEECTTSSSHHH-----------------HEE
T ss_pred ecCCCCCEEEEEEeCCC----------cEEEEECCCccccCCCCEEEEEEEcCCCcceee-----------------eee
Confidence 45678999999999986 56666653 22345788999988533110000 000
Q ss_pred cEEEEEEeccCCceeEEEecCCCCcEEEEE-----------eCCCeEEEEeCCCCCCCCCCCCCCCCcEE-----EecCC
Q 014454 115 KVQIIQQINHDGEVNRARYMPQNPFLIATK-----------TVSAEVYVFDYSKHPSKPPLDGACSPDLR-----LRGHS 178 (424)
Q Consensus 115 ~~~~~~~~~h~~~v~~~~~~p~~~~~latg-----------~~dg~v~iw~~~~~~~~~~~~~~~~~~~~-----~~~h~ 178 (424)
.......-.|...|.++++.+ . ++++| +.|+.+++|++...... ...... ...+.
T Consensus 63 ~~~~~~l~~~~~~v~s~~~~~--~-~~~~g~~~~~~~l~s~~~d~~~r~~~~~~~~~~------~~~~~~~~~~~~~~~~ 133 (365)
T 4h5i_A 63 ILSEFALEDNDDSPTAIDASK--G-IILVGCNENSTKITQGKGNKHLRKFKYDKVNDQ------LEFLTSVDFDASTNAD 133 (365)
T ss_dssp EEEEEECCTTSCCCCEEEEET--T-EEEEECCCCHHHHHHTSCCCCEEEEEEETTTTE------EEEEEEECSSCCCCTT
T ss_pred eeeEEEccCCCCceEEEEeCC--C-EEEEEECCCccEEEEecCCCcEEEEEecCCCce------EEEeeeeceeecCCcc
Confidence 111122335778888888764 2 45544 45788999998762111 111111 12234
Q ss_pred CceeEEEecCCCCceEE--EEeCCCcEEEEeCCCCCCCCcccceeeeecCCccEeeEEEecCCCcEEEEEeCCCeEEEEE
Q 014454 179 TEGYGLSWSKFKEGHLL--SGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWD 256 (424)
Q Consensus 179 ~~v~~l~~~~~~~~~l~--s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~dg~i~i~d 256 (424)
..+.+++|+|+|. +++ +++.|++|+|||+.+.. .+..+. |...|.+++|+|++. ++++++. +.+++|+
T Consensus 134 ~~~~~v~fSpDg~-~la~as~~~d~~i~iwd~~~~~------~~~~~~-~~~~V~~v~fspdg~-~l~s~s~-~~~~~~~ 203 (365)
T 4h5i_A 134 DYTKLVYISREGT-VAAIASSKVPAIMRIIDPSDLT------EKFEIE-TRGEVKDLHFSTDGK-VVAYITG-SSLEVIS 203 (365)
T ss_dssp CCEEEEEECTTSS-CEEEEESCSSCEEEEEETTTTE------EEEEEE-CSSCCCEEEECTTSS-EEEEECS-SCEEEEE
T ss_pred cCEEEEEEcCCCC-EEEEEECCCCCEEEEeECCCCc------EEEEeC-CCCceEEEEEccCCc-eEEeccc-eeEEEEE
Confidence 5588999999998 555 45579999999998763 334443 778899999999997 5567764 5567777
Q ss_pred cCCCCCCCCeeeeeccCCCeeEEEecCCCCeEEEEEeCCC----cEEEEECCCCCC---cceEecCCCCCEEEEEEcCCC
Q 014454 257 LRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATGSTDK----TVKLFDLRKIST---ALHTFDSHKEEVFQVGWNPKN 329 (424)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~l~tg~~dg----~i~iwd~~~~~~---~~~~~~~h~~~v~~~~~sp~~ 329 (424)
..++.. ........|...|.+++|+|++. ++++++.|+ .+++||+..... ....+..|...|++++|+|++
T Consensus 204 ~~~~~~-~~~~~~~~~~~~v~~v~fspdg~-~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg 281 (365)
T 4h5i_A 204 TVTGSC-IARKTDFDKNWSLSKINFIADDT-VLIAASLKKGKGIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDMKG 281 (365)
T ss_dssp TTTCCE-EEEECCCCTTEEEEEEEEEETTE-EEEEEEESSSCCEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECTTS
T ss_pred eccCcc-eeeeecCCCCCCEEEEEEcCCCC-EEEEEecCCcceeEEeecccccceecceeeeeecCCCCCeEeEEECCCC
Confidence 766553 11123356788899999999998 577887776 688899876322 234567899999999999999
Q ss_pred CcEEEEEECCCeEEEeeCCCCCcccCCCCcCCCCCeeeEE-EcCCCCCcceEEeCCCCCcEEEEEeCCCcEEEEecCCcc
Q 014454 330 ETILASCCLGRRLMVWDLSRIDEEQTPEDAEDGPPELLFI-HGGHTSKISDFSWNPCEDWVISSVAEDNILQIWQMAENI 408 (424)
Q Consensus 330 ~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~-~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~ 408 (424)
+ +||+|+.|++|+|||++++ +++.. +.+|...|++++|+|+++ +|+|++.|++|+||++..+.
T Consensus 282 ~-~lasgs~D~~V~iwd~~~~--------------~~~~~~~~gH~~~V~~v~fSpdg~-~laS~S~D~tvrvw~ip~~~ 345 (365)
T 4h5i_A 282 E-LAVLASNDNSIALVKLKDL--------------SMSKIFKQAHSFAITEVTISPDST-YVASVSAANTIHIIKLPLNY 345 (365)
T ss_dssp C-EEEEEETTSCEEEEETTTT--------------EEEEEETTSSSSCEEEEEECTTSC-EEEEEETTSEEEEEECCTTT
T ss_pred C-ceEEEcCCCEEEEEECCCC--------------cEEEEecCcccCCEEEEEECCCCC-EEEEEeCCCeEEEEEcCCCC
Confidence 6 8999999999999999875 45555 479999999999999999 79999999999999997654
Q ss_pred C
Q 014454 409 Y 409 (424)
Q Consensus 409 ~ 409 (424)
.
T Consensus 346 ~ 346 (365)
T 4h5i_A 346 A 346 (365)
T ss_dssp T
T ss_pred c
Confidence 3
No 56
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=100.00 E-value=5e-33 Score=251.55 Aligned_cols=253 Identities=19% Similarity=0.263 Sum_probs=209.9
Q ss_pred EEEeccCCceeEEEecCCCCcEEEEEeCCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCceeEEEecCCCCceEEEEe
Q 014454 119 IQQINHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGS 198 (424)
Q Consensus 119 ~~~~~h~~~v~~~~~~p~~~~~latg~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~ 198 (424)
.....|.+.|.+++|+|++. +|++|+.||.|++|++... ........+.+|...|.+++|. +. +|++++
T Consensus 53 ~~~~~~~~~v~~~~~~~~~~-~l~~~~~dg~i~~~~~~~~-------~~~~~~~~~~~~~~~i~~~~~~--~~-~l~~~~ 121 (313)
T 3odt_A 53 TVVYTGQGFLNSVCYDSEKE-LLLFGGKDTMINGVPLFAT-------SGEDPLYTLIGHQGNVCSLSFQ--DG-VVISGS 121 (313)
T ss_dssp EEEEECSSCEEEEEEETTTT-EEEEEETTSCEEEEETTCC-------TTSCC-CEECCCSSCEEEEEEE--TT-EEEEEE
T ss_pred EEeecCCccEEEEEECCCCC-EEEEecCCCeEEEEEeeec-------CCCCcccchhhcccCEEEEEec--CC-EEEEEe
Confidence 33457899999999999886 8999999999999999762 1234566788999999999994 44 799999
Q ss_pred CCCcEEEEeCCCCCCCCcccceeeeecCCccEeeEEEecCCCcEEEEEeCCCeEEEEEcCCCCCCCCeeeeec-cCCCee
Q 014454 199 DDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVA-HQSEVN 277 (424)
Q Consensus 199 ~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~dg~i~i~d~~~~~~~~~~~~~~~-~~~~v~ 277 (424)
.||.|++||.. .....+..|...+.+++|+|.....+++++.||.|++||... ....+.. |...+.
T Consensus 122 ~d~~i~~~d~~--------~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~i~d~~~-----~~~~~~~~~~~~i~ 188 (313)
T 3odt_A 122 WDKTAKVWKEG--------SLVYNLQAHNASVWDAKVVSFSENKFLTASADKTIKLWQNDK-----VIKTFSGIHNDVVR 188 (313)
T ss_dssp TTSEEEEEETT--------EEEEEEECCSSCEEEEEEEETTTTEEEEEETTSCEEEEETTE-----EEEEECSSCSSCEE
T ss_pred CCCCEEEEcCC--------cEEEecccCCCceeEEEEccCCCCEEEEEECCCCEEEEecCc-----eEEEEeccCcccEE
Confidence 99999999921 345667789999999999994445778999999999999432 3455555 889999
Q ss_pred EEEecCCCCeEEEEEeCCCcEEEEECCCCCCcceEecCCCCCEEEEEEcCCCCcEEEEEECCCeEEEeeCCCCCcccCCC
Q 014454 278 CLAFNPFNEWILATGSTDKTVKLFDLRKISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPE 357 (424)
Q Consensus 278 ~v~~~~~~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~ 357 (424)
+++|+|++. +++++.||.|++||+++ ++++..+..|...|++++|+|++ . |++++.||.|++||++..
T Consensus 189 ~~~~~~~~~--~~~~~~dg~i~i~d~~~-~~~~~~~~~~~~~i~~~~~~~~~-~-l~~~~~dg~v~iwd~~~~------- 256 (313)
T 3odt_A 189 HLAVVDDGH--FISCSNDGLIKLVDMHT-GDVLRTYEGHESFVYCIKLLPNG-D-IVSCGEDRTVRIWSKENG------- 256 (313)
T ss_dssp EEEEEETTE--EEEEETTSEEEEEETTT-CCEEEEEECCSSCEEEEEECTTS-C-EEEEETTSEEEEECTTTC-------
T ss_pred EEEEcCCCe--EEEccCCCeEEEEECCc-hhhhhhhhcCCceEEEEEEecCC-C-EEEEecCCEEEEEECCCC-------
Confidence 999999875 88999999999999998 68889999999999999999998 3 889999999999999875
Q ss_pred CcCCCCCeeeEEEcCCCCCcceEEeCCCCCcEEEEEeCCCcEEEEecCCccCCCCCCCC
Q 014454 358 DAEDGPPELLFIHGGHTSKISDFSWNPCEDWVISSVAEDNILQIWQMAENIYHDEDDLP 416 (424)
Q Consensus 358 ~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~~~~~~~~ 416 (424)
.++..+..|...|.+++|+|+++ +++++.||.|++|++.++.+..+...+
T Consensus 257 -------~~~~~~~~~~~~i~~~~~~~~~~--~~~~~~dg~i~iw~~~~~~~~~~~~~~ 306 (313)
T 3odt_A 257 -------SLKQVITLPAISIWSVDCMSNGD--IIVGSSDNLVRIFSQEKSRWASEDEIK 306 (313)
T ss_dssp -------CEEEEEECSSSCEEEEEECTTSC--EEEEETTSCEEEEESCGGGCCC-----
T ss_pred -------ceeEEEeccCceEEEEEEccCCC--EEEEeCCCcEEEEeCCCCceeehhhhh
Confidence 55677788998999999999998 456889999999999998776655543
No 57
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=100.00 E-value=1.6e-33 Score=266.10 Aligned_cols=258 Identities=22% Similarity=0.424 Sum_probs=215.4
Q ss_pred CCcEE-EEEEeccCCceeEEEecCCCCcEEEEEeCCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCceeEEEecCCCC
Q 014454 113 NGKVQ-IIQQINHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKE 191 (424)
Q Consensus 113 ~~~~~-~~~~~~h~~~v~~~~~~p~~~~~latg~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~ 191 (424)
.+++. ++..-.|...|++|+|+|++. +||+|+.||.|+|||+.+ ......+.+|...+.+++|++ .
T Consensus 134 tg~~~~~~~~~~~~~~V~sv~fspdg~-~lasgs~Dg~v~iWd~~~----------~~~~~~~~~h~~~v~~~s~~~--~ 200 (420)
T 4gga_A 134 SGDILQLLQMEQPGEYISSVAWIKEGN-YLAVGTSSAEVQLWDVQQ----------QKRLRNMTSHSARVGSLSWNS--Y 200 (420)
T ss_dssp TCCEEEEEECCSTTCCEEEEEECTTSS-EEEEEETTSCEEEEETTT----------TEEEEEECCCSSCEEEEEEET--T
T ss_pred CCCEEEEEEecCCCCcEEEEEECCCCC-EEEEEECCCeEEEEEcCC----------CcEEEEEeCCCCceEEEeeCC--C
Confidence 44443 333346888999999999986 899999999999999987 466778899999999999864 3
Q ss_pred ceEEEEeCCCcEEEEeCCCCCCCCcccceeeeecCCccEeeEEEecCCCcEEEEEeCCCeEEEEEcCCCCCC-CCeeeee
Q 014454 192 GHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVS-KPVQSVV 270 (424)
Q Consensus 192 ~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~dg~i~i~d~~~~~~~-~~~~~~~ 270 (424)
+|++|+.|+.+++||..... ..+..+.+|...+..+.|+|++. .+++++.|+.+++||...+... ..+....
T Consensus 201 -~l~sgs~d~~i~~~d~~~~~-----~~~~~~~~h~~~~~~~~~~~~g~-~l~s~~~D~~v~i~~~~~~~~~~~~~~~~~ 273 (420)
T 4gga_A 201 -ILSSGSRSGHIHHHDVRVAE-----HHVATLSGHSQEVCGLRWAPDGR-HLASGGNDNLVNVWPSAPGEGGWVPLQTFT 273 (420)
T ss_dssp -EEEEEETTSEEEEEETTSSS-----CEEEEEECCSSCEEEEEECTTSS-EEEEEETTSCEEEEESSCCSSCSCCSEEEC
T ss_pred -EEEEEeCCCceeEeeecccc-----eeeEEecccccceeeeeecCCCC-eeeeeeccccceEEeeccccccceeeeeec
Confidence 79999999999999987643 24566788999999999999987 5679999999999999876532 3456667
Q ss_pred ccCCCeeEEEecCCCCeEEEEE--eCCCcEEEEECCCCCCcceEecCCCCCEEEEEEcCCCCcEEEEEE-CCCeEEEeeC
Q 014454 271 AHQSEVNCLAFNPFNEWILATG--STDKTVKLFDLRKISTALHTFDSHKEEVFQVGWNPKNETILASCC-LGRRLMVWDL 347 (424)
Q Consensus 271 ~~~~~v~~v~~~~~~~~~l~tg--~~dg~i~iwd~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~l~s~~-~dg~i~iwd~ 347 (424)
.|...|.+++|+|.+..+++++ +.|++|++||+++ +.++..+.. ...+.++.|+|++..++++++ .|+.|+|||+
T Consensus 274 ~~~~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t-~~~~~~~~~-~~~v~~~~~~~~~~~lv~~sg~~d~~I~iwd~ 351 (420)
T 4gga_A 274 QHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCS-GACLSAVDA-HSQVCSILWSPHYKELISGHGFAQNQLVIWKY 351 (420)
T ss_dssp CCSSCEEEEEECTTCTTEEEEEECTTTCEEEEEETTT-TEEEEEEEC-SSCEEEEEEETTTTEEEEEECTTTCCEEEEET
T ss_pred ccCCceeeeeeCCCcccEEEEEeecCCCEEEEEeCCc-cccceeecc-ccceeeeeecCCCCeEEEEEecCCCEEEEEEC
Confidence 8999999999999988888775 4799999999998 677777765 467999999999975444333 6899999999
Q ss_pred CCCCcccCCCCcCCCCCeeeEEEcCCCCCcceEEeCCCCCcEEEEEeCCCcEEEEecCCc
Q 014454 348 SRIDEEQTPEDAEDGPPELLFIHGGHTSKISDFSWNPCEDWVISSVAEDNILQIWQMAEN 407 (424)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~ 407 (424)
.++ .++..+.+|...|++++|+|+++ +|+||+.|++|+|||+.+.
T Consensus 352 ~~~--------------~~v~~l~gH~~~V~~l~~spdg~-~l~S~s~D~tvriWdv~~~ 396 (420)
T 4gga_A 352 PTM--------------AKVAELKGHTSRVLSLTMSPDGA-TVASAAADETLRLWRCFEL 396 (420)
T ss_dssp TTC--------------CEEEEECCCSSCEEEEEECTTSS-CEEEEETTTEEEEECCSCS
T ss_pred CCC--------------cEEEEEcCCCCCEEEEEEcCCCC-EEEEEecCCeEEEEECCCC
Confidence 875 56788899999999999999999 6999999999999999764
No 58
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=100.00 E-value=4e-35 Score=272.92 Aligned_cols=264 Identities=14% Similarity=0.178 Sum_probs=192.9
Q ss_pred ccCCceeEEEecCCCCcEEEEEeCCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCceeEEEecCCCCceEEEEeCCCc
Q 014454 123 NHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDDAQ 202 (424)
Q Consensus 123 ~h~~~v~~~~~~p~~~~~latg~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~ 202 (424)
.|.+.|++++|+|++. +||+|+.||.|+|||+.... ...+...+.+|...|.+++|+|++. +|++|+.|+.
T Consensus 53 ~h~~~v~~~~~s~~~~-~l~s~s~d~~v~vwd~~~~~-------~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~ 123 (377)
T 3dwl_C 53 DHDKIVTCVDWAPKSN-RIVTCSQDRNAYVYEKRPDG-------TWKQTLVLLRLNRAATFVRWSPNED-KFAVGSGARV 123 (377)
T ss_dssp CCSSCEEEEEECTTTC-CEEEEETTSSEEEC-------------CCCCEEECCCCSSCEEEEECCTTSS-CCEEEESSSC
T ss_pred cCCceEEEEEEeCCCC-EEEEEeCCCeEEEEEcCCCC-------ceeeeeEecccCCceEEEEECCCCC-EEEEEecCCe
Confidence 6899999999999886 89999999999999998721 1345667788999999999999887 7999999999
Q ss_pred EEEEeCCCCCCCCcccceeeeec-CCccEeeEEEecCCCcEEEEEeCCCeEEEEEcCCCCC---------------CCCe
Q 014454 203 ICLWDINAAPKNKSLEAMQIFKV-HEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSV---------------SKPV 266 (424)
Q Consensus 203 i~iwd~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~~s~~~dg~i~i~d~~~~~~---------------~~~~ 266 (424)
|++||++.... ......+.. |...|.+++|+|++. +|++++.||.|++||++.... ...+
T Consensus 124 i~iwd~~~~~~---~~~~~~~~~~h~~~v~~~~~~~~~~-~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (377)
T 3dwl_C 124 ISVCYFEQEND---WWVSKHLKRPLRSTILSLDWHPNNV-LLAAGCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVC 199 (377)
T ss_dssp EEECCC--------CCCCEEECSSCCSCEEEEEECTTSS-EEEEEESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEE
T ss_pred EEEEEECCccc---ceeeeEeecccCCCeEEEEEcCCCC-EEEEEeCCCEEEEEEEEecccCCCccccccccccchhhhh
Confidence 99999987642 122445556 999999999999886 667999999999999964321 1123
Q ss_pred eeeeccCCCeeEEEecCCCCeEEEEEeCCCcEEEEECCCCCCc----ceEecCCCCCEEEEEEcCCCCcEEEEEECCCeE
Q 014454 267 QSVVAHQSEVNCLAFNPFNEWILATGSTDKTVKLFDLRKISTA----LHTFDSHKEEVFQVGWNPKNETILASCCLGRRL 342 (424)
Q Consensus 267 ~~~~~~~~~v~~v~~~~~~~~~l~tg~~dg~i~iwd~~~~~~~----~~~~~~h~~~v~~~~~sp~~~~~l~s~~~dg~i 342 (424)
..+ .|...|++++|+|++. +|++|+.||.|++||+++ ... +..+..|...|.+++|+|++. +|++++.++.+
T Consensus 200 ~~~-~~~~~v~~~~~sp~~~-~l~~~~~d~~i~iwd~~~-~~~~~~~~~~~~~~~~~v~~~~~s~~~~-~l~~~~~~~~~ 275 (377)
T 3dwl_C 200 AEY-PSGGWVHAVGFSPSGN-ALAYAGHDSSVTIAYPSA-PEQPPRALITVKLSQLPLRSLLWANESA-IVAAGYNYSPI 275 (377)
T ss_dssp ECC-CCSSSEEEEEECTTSS-CEEEEETTTEEC-CEECS-TTSCEEECCCEECSSSCEEEEEEEETTE-EEEEESSSSEE
T ss_pred hcc-cCCceEEEEEECCCCC-EEEEEeCCCcEEEEECCC-CCCcceeeEeecCCCCceEEEEEcCCCC-EEEEEcCCcEE
Confidence 333 7899999999999998 699999999999999998 444 778889999999999999985 78888766655
Q ss_pred EEeeCCCCCccc--CCCCcCCCCC-----------------------eeeE-------------EEcCCCCCcceEEeCC
Q 014454 343 MVWDLSRIDEEQ--TPEDAEDGPP-----------------------ELLF-------------IHGGHTSKISDFSWNP 384 (424)
Q Consensus 343 ~iwd~~~~~~~~--~~~~~~~~~~-----------------------~~~~-------------~~~~h~~~v~~~~~~~ 384 (424)
+|+........ .......... .... ....|...|+++++.+
T Consensus 276 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~H~~~i~~~~~~~ 354 (377)
T 3dwl_C 276 -LLQGNESGWAHTRDLDAGTSKTSFTHTGNTGEGREEEGPVSFTALRSTFRNMDLKGSSQSISSLPTVHQNMIATLRPYA 354 (377)
T ss_dssp -EECCCC---CCSBCCCSCCCCCCBSSSSSBCCCCCC-------------------------CCCSSSCSSCEEEEEEEE
T ss_pred -EEEeCCCceEEEeeecccccccccccccccccccccccccccccccccccchhhccccccccccCccccceeEEEeccC
Confidence 77665322110 0000000000 0000 1124899999999876
Q ss_pred CCCc---EEEEEeCCCcEEEEec
Q 014454 385 CEDW---VISSVAEDNILQIWQM 404 (424)
Q Consensus 385 ~~~~---~l~s~~~dg~i~vw~~ 404 (424)
.... .|+|+|.||.|+|||+
T Consensus 355 ~~~~~~~~~~s~g~Dg~i~iWdl 377 (377)
T 3dwl_C 355 GTPGNITAFTSSGTDGRVVLWTL 377 (377)
T ss_dssp EETTEEEEEEEEETTSEEEEECC
T ss_pred CCCCceEEEEeecCCCcEEEecC
Confidence 5543 5999999999999986
No 59
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=100.00 E-value=1.7e-34 Score=267.08 Aligned_cols=262 Identities=15% Similarity=0.254 Sum_probs=210.4
Q ss_pred eccCCceeEEEecCC---CCcEEEEEeCCCeEEEEeCCCCCCCCCCCCCCCCcEEEec-----CCCceeEEEecCCCC--
Q 014454 122 INHDGEVNRARYMPQ---NPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRG-----HSTEGYGLSWSKFKE-- 191 (424)
Q Consensus 122 ~~h~~~v~~~~~~p~---~~~~latg~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~-----h~~~v~~l~~~~~~~-- 191 (424)
.+|.+.|++++|+|+ +..++++++.++.|+||++.. ......+.. |...|++++|+|++.
T Consensus 15 ~~h~~~v~~i~~~p~~~~~~~~~~~~~~~~~v~vw~~~~----------~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 84 (366)
T 3k26_A 15 EDHNQPLFGVQFNWHSKEGDPLVFATVGSNRVTLYECHS----------QGEIRLLQSYVDADADENFYTCAWTYDSNTS 84 (366)
T ss_dssp CTTCSCEEEEEECTTCCTTSCEEEEEEETTEEEEEEECG----------GGCEEEEEEEECSCTTCCEEEEEEEECTTTC
T ss_pred cCCCCceEEEEEecccCCCCceEEEECCCCEEEEEEcCC----------CcEEEeeeeccccCCCCcEEEEEeccCCCCC
Confidence 369999999999984 444566667778999999986 233333433 667899999999842
Q ss_pred -ceEEEEeCCCcEEEEeCCCCCCCCcccceeeeecCCccEeeEEEecCCCcEEEEEeCCCeEEEEEcCCCCCCCCeeee-
Q 014454 192 -GHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSV- 269 (424)
Q Consensus 192 -~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~dg~i~i~d~~~~~~~~~~~~~- 269 (424)
.+|++|+.||.|++||+.++ ..+..+.+|...|.+++|+|.+..+|++++.||.|++||+++++. +..+
T Consensus 85 ~~~l~~~~~dg~i~v~d~~~~------~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~---~~~~~ 155 (366)
T 3k26_A 85 HPLLAVAGSRGIIRIINPITM------QCIKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDTL---VAIFG 155 (366)
T ss_dssp CEEEEEEETTCEEEEECTTTC------CEEEEEESCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTTTEE---EEEEC
T ss_pred CCEEEEecCCCEEEEEEchhc------eEeeeecCCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeecCeE---EEEec
Confidence 37999999999999999865 345667789999999999994445778999999999999998653 4554
Q ss_pred --eccCCCeeEEEecCCCCeEEEEEeCCCcEEEEECCCCCCcceEe----------------------------cCCCCC
Q 014454 270 --VAHQSEVNCLAFNPFNEWILATGSTDKTVKLFDLRKISTALHTF----------------------------DSHKEE 319 (424)
Q Consensus 270 --~~~~~~v~~v~~~~~~~~~l~tg~~dg~i~iwd~~~~~~~~~~~----------------------------~~h~~~ 319 (424)
..|...|.+++|+|++. +|++++.||.|++||+++ .+.+..+ ..|...
T Consensus 156 ~~~~~~~~v~~~~~~~~~~-~l~~~~~dg~i~i~d~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (366)
T 3k26_A 156 GVEGHRDEVLSADYDLLGE-KIMSCGMDHSLKLWRINS-KRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNY 233 (366)
T ss_dssp STTSCSSCEEEEEECTTSS-EEEEEETTSCEEEEESCS-HHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCSSC
T ss_pred ccccccCceeEEEECCCCC-EEEEecCCCCEEEEECCC-CccccccceeEEecCCCCcccccceeeccCccccccCCcce
Confidence 57999999999999888 699999999999999987 3333322 338999
Q ss_pred EEEEEEcCCCCcEEEEEECCCeEEEeeCCCCCcccCCCCcCCCCCeeeEEEcCCCCCcceEEeCCC--CCcEEEEEeCCC
Q 014454 320 VFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPEDAEDGPPELLFIHGGHTSKISDFSWNPC--EDWVISSVAEDN 397 (424)
Q Consensus 320 v~~~~~sp~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~--~~~~l~s~~~dg 397 (424)
|.+++|+ + .+|++++.|+.|++||++..................+..+.+|...|+.++|+|+ ++ +|++++.||
T Consensus 234 v~~~~~~--~-~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~-~l~~~~~dg 309 (366)
T 3k26_A 234 VDCVRWL--G-DLILSKSCENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMDFWQK-MLALGNQVG 309 (366)
T ss_dssp CCEEEEE--T-TEEEEECSSSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSSCCSSCCCCEECTTSS-EEEEECTTS
T ss_pred EEEEEEc--C-CEEEEEecCCEEEEEeCCCccccccccccCCcchheeccccccCCcEEEEEEcCCCCCc-EEEEEecCC
Confidence 9999999 4 3799999999999999987654332222223334667888899999999999999 88 799999999
Q ss_pred cEEEEecCCcc
Q 014454 398 ILQIWQMAENI 408 (424)
Q Consensus 398 ~i~vw~~~~~~ 408 (424)
.|++|++.++.
T Consensus 310 ~i~vwd~~~~~ 320 (366)
T 3k26_A 310 KLYVWDLEVED 320 (366)
T ss_dssp CEEEEECCSSS
T ss_pred cEEEEECCCCC
Confidence 99999998864
No 60
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=100.00 E-value=2.1e-34 Score=267.31 Aligned_cols=251 Identities=13% Similarity=0.153 Sum_probs=211.1
Q ss_pred ccCCceeEEEecCCCCcEEEEEeCCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCceeEEEecCCCCceEEEEeCCCc
Q 014454 123 NHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDDAQ 202 (424)
Q Consensus 123 ~h~~~v~~~~~~p~~~~~latg~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~ 202 (424)
.|.++|++++|+|++. +||+|+.+|.|++|++.. ........+.+|...|.+++|+|++. +|++++.||.
T Consensus 6 ~~~~~i~~~~~s~~~~-~l~~~~~d~~v~i~~~~~--------~~~~~~~~~~~h~~~v~~~~~~~~~~-~l~~~~~dg~ 75 (372)
T 1k8k_C 6 FLVEPISCHAWNKDRT-QIAICPNNHEVHIYEKSG--------NKWVQVHELKEHNGQVTGVDWAPDSN-RIVTCGTDRN 75 (372)
T ss_dssp SCSSCCCEEEECTTSS-EEEEECSSSEEEEEEEET--------TEEEEEEEEECCSSCEEEEEEETTTT-EEEEEETTSC
T ss_pred ccCCCeEEEEECCCCC-EEEEEeCCCEEEEEeCCC--------CcEEeeeeecCCCCcccEEEEeCCCC-EEEEEcCCCe
Confidence 3899999999999886 899999999999999987 22226678889999999999999887 7999999999
Q ss_pred EEEEeCCCCCCCCcccceeeeecCCccEeeEEEecCCCcEEEEEeCCCeEEEEEcCCCCCCCCeeee-eccCCCeeEEEe
Q 014454 203 ICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSV-VAHQSEVNCLAF 281 (424)
Q Consensus 203 i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~dg~i~i~d~~~~~~~~~~~~~-~~~~~~v~~v~~ 281 (424)
|++||+.++.. .....+..|...|.+++|+|++. +|++++.||.|++||++..........+ ..|...|++++|
T Consensus 76 i~vwd~~~~~~----~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~ 150 (372)
T 1k8k_C 76 AYVWTLKGRTW----KPTLVILRINRAARCVRWAPNEK-KFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDW 150 (372)
T ss_dssp EEEEEEETTEE----EEEEECCCCSSCEEEEEECTTSS-EEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEE
T ss_pred EEEEECCCCee----eeeEEeecCCCceeEEEECCCCC-EEEEEeCCCEEEEEEecCCCcceeeeeeecccCCCeeEEEE
Confidence 99999976521 22333456889999999999986 5679999999999999986531112222 567899999999
Q ss_pred cCCCCeEEEEEeCCCcEEEEECCC-----------------CCCcceEecCCCCCEEEEEEcCCCCcEEEEEECCCeEEE
Q 014454 282 NPFNEWILATGSTDKTVKLFDLRK-----------------ISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMV 344 (424)
Q Consensus 282 ~~~~~~~l~tg~~dg~i~iwd~~~-----------------~~~~~~~~~~h~~~v~~~~~sp~~~~~l~s~~~dg~i~i 344 (424)
+|++. +|++|+.||.|++||++. .+.++..+..|...|.+++|+|++. +|++++.||.|++
T Consensus 151 ~~~~~-~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~i~i 228 (372)
T 1k8k_C 151 HPNSV-LLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGS-RVAWVSHDSTVCL 228 (372)
T ss_dssp CTTSS-EEEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSS-EEEEEETTTEEEE
T ss_pred cCCCC-EEEEEcCCCCEEEEEcccccccccccccccccccchhhheEecCCCCCeEEEEEECCCCC-EEEEEeCCCEEEE
Confidence 99887 699999999999999741 2567788889999999999999995 7999999999999
Q ss_pred eeCCCCCcccCCCCcCCCCCeeeEEEcCCCCCcceEEeCCCCCcEEEEEeCCCcEEEEecCC
Q 014454 345 WDLSRIDEEQTPEDAEDGPPELLFIHGGHTSKISDFSWNPCEDWVISSVAEDNILQIWQMAE 406 (424)
Q Consensus 345 wd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~vw~~~~ 406 (424)
||++.. ..+..+.+|...|.+++|+|++. +|+++ .|+.|++|++..
T Consensus 229 ~d~~~~--------------~~~~~~~~~~~~v~~~~~~~~~~-~l~~~-~d~~i~i~~~~~ 274 (372)
T 1k8k_C 229 ADADKK--------------MAVATLASETLPLLAVTFITESS-LVAAG-HDCFPVLFTYDS 274 (372)
T ss_dssp EEGGGT--------------TEEEEEECSSCCEEEEEEEETTE-EEEEE-TTSSCEEEEEET
T ss_pred EECCCC--------------ceeEEEccCCCCeEEEEEecCCC-EEEEE-eCCeEEEEEccC
Confidence 999875 45677788999999999999998 67766 899999999988
No 61
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=100.00 E-value=3.5e-34 Score=268.29 Aligned_cols=258 Identities=13% Similarity=0.159 Sum_probs=210.8
Q ss_pred ccCCceeEEEecCCCCcEEEEEeCCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCceeEEEecCC----C---CceEE
Q 014454 123 NHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKF----K---EGHLL 195 (424)
Q Consensus 123 ~h~~~v~~~~~~p~~~~~latg~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~----~---~~~l~ 195 (424)
+|.+.|++++|+| .+||+|+.||.|+||++....... .......+.+|...|.+++|+|+ + . +|+
T Consensus 14 ~h~~~i~~~~~~~---~~l~s~~~dg~i~iw~~~~~~~~~----~~~~~~~~~~h~~~v~~~~~~~~~~~~g~~~~-~l~ 85 (397)
T 1sq9_A 14 AHDADIFSVSACN---SFTVSCSGDGYLKVWDNKLLDNEN----PKDKSYSHFVHKSGLHHVDVLQAIERDAFELC-LVA 85 (397)
T ss_dssp CSSSCEEEEEECS---SEEEEEETTSEEEEEESBCCTTCC----GGGGEEEEECCTTCEEEEEEEEEEETTTEEEE-EEE
T ss_pred hhhcCeEEEEecC---CeEEEEcCCCEEEEEECCCccccc----CCCcceEEecCCCcEEEEEEecccccCCcccc-EEE
Confidence 6999999999998 489999999999999998721110 12356788899999999999998 6 6 799
Q ss_pred EEeCCCcEEEEeCCCCCCCCcccceeeeecC-----CccEeeEEEe----cCCCcEEEEEeCCCeEEEEEcCC------C
Q 014454 196 SGSDDAQICLWDINAAPKNKSLEAMQIFKVH-----EGVVEDVAWH----LRHEYLFGSVGDDQYLLIWDLRT------P 260 (424)
Q Consensus 196 s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~-----~~~v~~~~~~----~~~~~~~~s~~~dg~i~i~d~~~------~ 260 (424)
+++.||.|++||+.+...... .....+..| ...|.+++|+ |++..+|++++.||.|++||++. .
T Consensus 86 s~~~dg~i~iw~~~~~~~~~~-~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~ 164 (397)
T 1sq9_A 86 TTSFSGDLLFYRITREDETKK-VIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNS 164 (397)
T ss_dssp EEETTSCEEEEEEEECTTTCC-EEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEESSSSHHHH
T ss_pred EEcCCCCEEEEEccCCccccc-ccceeecccccccCCCcEEEEEEeeccCCCCceEEEEEeCCCcEEEEeCCcccccccc
Confidence 999999999999987643111 114556667 5899999999 98875367999999999999998 5
Q ss_pred CCCC--Ceeee-------eccCCCeeEEEecCCCCeEEEEEeCCCcEEEEECCCCCCcceEecC---C---CCCEEEEEE
Q 014454 261 SVSK--PVQSV-------VAHQSEVNCLAFNPFNEWILATGSTDKTVKLFDLRKISTALHTFDS---H---KEEVFQVGW 325 (424)
Q Consensus 261 ~~~~--~~~~~-------~~~~~~v~~v~~~~~~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~~---h---~~~v~~~~~ 325 (424)
.... +...+ ..|...|++++|+|++ +|++|+.||.|++||+++ .+++..+.. | ...|.+++|
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--~l~~~~~dg~i~i~d~~~-~~~~~~~~~~~~h~~~~~~i~~i~~ 241 (397)
T 1sq9_A 165 LTLNWSPTLELQGTVESPMTPSQFATSVDISERG--LIATGFNNGTVQISELST-LRPLYNFESQHSMINNSNSIRSVKF 241 (397)
T ss_dssp TTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS--EEEEECTTSEEEEEETTT-TEEEEEEECCC---CCCCCEEEEEE
T ss_pred ceeeccCcceeeeeeccccCCCCCceEEEECCCc--eEEEEeCCCcEEEEECCC-CceeEEEeccccccccCCccceEEE
Confidence 5322 11144 3488999999999988 699999999999999998 688888888 8 999999999
Q ss_pred cCCCCcEEEEEECC---CeEEEeeCCCCCcccCCCCcCCCCCeeeEEEcC-------------CCCCcceEEeCCCCCcE
Q 014454 326 NPKNETILASCCLG---RRLMVWDLSRIDEEQTPEDAEDGPPELLFIHGG-------------HTSKISDFSWNPCEDWV 389 (424)
Q Consensus 326 sp~~~~~l~s~~~d---g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~-------------h~~~v~~~~~~~~~~~~ 389 (424)
+|++. +|++++.| |.|++||++.. ..+..+.+ |...|.+++|+|+++ +
T Consensus 242 ~~~~~-~l~~~~~d~~~g~i~i~d~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~ 305 (397)
T 1sq9_A 242 SPQGS-LLAIAHDSNSFGCITLYETEFG--------------ERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGE-T 305 (397)
T ss_dssp CSSTT-EEEEEEEETTEEEEEEEETTTC--------------CEEEEECBC--------CCBSBSSCEEEEEECSSSS-E
T ss_pred CCCCC-EEEEEecCCCCceEEEEECCCC--------------cccceeccCcccccccccccccCCcEEEEEECCCCC-E
Confidence 99985 78999999 99999999875 44566666 899999999999999 6
Q ss_pred EEEEeCCCcEEEEecCCcc
Q 014454 390 ISSVAEDNILQIWQMAENI 408 (424)
Q Consensus 390 l~s~~~dg~i~vw~~~~~~ 408 (424)
|++++.||.|++|++.++.
T Consensus 306 l~~~~~dg~i~iwd~~~~~ 324 (397)
T 1sq9_A 306 LCSAGWDGKLRFWDVKTKE 324 (397)
T ss_dssp EEEEETTSEEEEEETTTTE
T ss_pred EEEEeCCCeEEEEEcCCCc
Confidence 8999999999999998764
No 62
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=100.00 E-value=9.7e-34 Score=261.16 Aligned_cols=266 Identities=15% Similarity=0.222 Sum_probs=208.3
Q ss_pred cEEEEEEeccCCceeEEEecCCCCcEEEEEeC---CCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCceeEEEecCCC-
Q 014454 115 KVQIIQQINHDGEVNRARYMPQNPFLIATKTV---SAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFK- 190 (424)
Q Consensus 115 ~~~~~~~~~h~~~v~~~~~~p~~~~~latg~~---dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~- 190 (424)
.+......+|.+.|++++|+|++..++++|+. ||.|+||++.. .... .....+|...|.+++|+|++
T Consensus 8 ~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~s~~~~d~~v~iw~~~~--------~~~~-~~~~~~~~~~v~~~~~~~~~~ 78 (357)
T 3i2n_A 8 QIIAHIQKGFNYTVFDCKWVPCSAKFVTMGNFARGTGVIQLYEIQH--------GDLK-LLREIEKAKPIKCGTFGATSL 78 (357)
T ss_dssp CEEEEEEEECSSCEEEEEECTTSSEEEEEEC--CCCEEEEEEEECS--------SSEE-EEEEEEESSCEEEEECTTCCT
T ss_pred HHhhhhccCCCCceEEEEEcCCCceEEEecCccCCCcEEEEEeCCC--------Cccc-ceeeecccCcEEEEEEcCCCC
Confidence 34444445799999999999999878888887 99999999987 1111 12234799999999999984
Q ss_pred -CceEEEEeCCCcEEEEeCCCCCCCCcccceeeeecCCccEeeEEE------ecCCCcEEEEEeCCCeEEEEEcCCCCCC
Q 014454 191 -EGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAW------HLRHEYLFGSVGDDQYLLIWDLRTPSVS 263 (424)
Q Consensus 191 -~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~------~~~~~~~~~s~~~dg~i~i~d~~~~~~~ 263 (424)
..+|++|+.||.|++||+.+... .+..+.+|...|.+++| +|++. +|++++.||.|++||++++..
T Consensus 79 ~~~~l~~~~~dg~i~iwd~~~~~~-----~~~~~~~~~~~v~~~~~~~~~~~s~~~~-~l~~~~~d~~i~vwd~~~~~~- 151 (357)
T 3i2n_A 79 QQRYLATGDFGGNLHIWNLEAPEM-----PVYSVKGHKEIINAIDGIGGLGIGEGAP-EIVTGSRDGTVKVWDPRQKDD- 151 (357)
T ss_dssp TTCCEEEEETTSCEEEECTTSCSS-----CSEEECCCSSCEEEEEEESGGGCC-CCC-EEEEEETTSCEEEECTTSCSS-
T ss_pred CCceEEEecCCCeEEEEeCCCCCc-----cEEEEEecccceEEEeeccccccCCCcc-EEEEEeCCCeEEEEeCCCCCC-
Confidence 34899999999999999987641 34567789999999965 56665 567999999999999998652
Q ss_pred CCeeeeeccCC----CeeEEE----ecCCCCeEEEEEeCCCcEEEEECCCCCCcceEecCCCCCEEEEEEcC---CCCcE
Q 014454 264 KPVQSVVAHQS----EVNCLA----FNPFNEWILATGSTDKTVKLFDLRKISTALHTFDSHKEEVFQVGWNP---KNETI 332 (424)
Q Consensus 264 ~~~~~~~~~~~----~v~~v~----~~~~~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~~h~~~v~~~~~sp---~~~~~ 332 (424)
++..+..|.. .+.+++ |+|++. +|++|+.||.|++||+++ ... .....|...|.+++|+| ++. +
T Consensus 152 -~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~-~l~~~~~d~~i~i~d~~~-~~~-~~~~~~~~~v~~~~~~~~~~~~~-~ 226 (357)
T 3i2n_A 152 -PVANMEPVQGENKRDCWTVAFGNAYNQEER-VVCAGYDNGDIKLFDLRN-MAL-RWETNIKNGVCSLEFDRKDISMN-K 226 (357)
T ss_dssp -CSEEECCCTTSCCCCEEEEEEECCCC-CCC-EEEEEETTSEEEEEETTT-TEE-EEEEECSSCEEEEEESCSSSSCC-E
T ss_pred -cceeccccCCCCCCceEEEEEEeccCCCCC-EEEEEccCCeEEEEECcc-Cce-eeecCCCCceEEEEcCCCCCCCC-E
Confidence 3555544444 889998 788887 699999999999999998 444 44466889999999999 775 7
Q ss_pred EEEEECCCeEEEeeCCCCCcccCCCCcCCCCCeeeEEEcCCCCCcceEEeCCCCCcEEEEEeCCCcEEEEecCCccCC
Q 014454 333 LASCCLGRRLMVWDLSRIDEEQTPEDAEDGPPELLFIHGGHTSKISDFSWNPCEDWVISSVAEDNILQIWQMAENIYH 410 (424)
Q Consensus 333 l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~~ 410 (424)
|++++.||.|++||++....... .......+|...|++++|+|+++.+|++++.||.|++|++..+...
T Consensus 227 l~~~~~dg~i~i~d~~~~~~~~~---------~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~ 295 (357)
T 3i2n_A 227 LVATSLEGKFHVFDMRTQHPTKG---------FASVSEKAHKSTVWQVRHLPQNRELFLTAGGAGGLHLWKYEYPIQR 295 (357)
T ss_dssp EEEEESTTEEEEEEEEEEETTTE---------EEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEEEECCSCC
T ss_pred EEEECCCCeEEEEeCcCCCcccc---------eeeeccCCCcCCEEEEEECCCCCcEEEEEeCCCcEEEeecCCCccc
Confidence 99999999999999987532111 1122455899999999999999867999999999999999876543
No 63
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.5e-33 Score=264.46 Aligned_cols=257 Identities=15% Similarity=0.188 Sum_probs=210.8
Q ss_pred EeccCCceeEEEecCCCCcEEEEEeCCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCc---------------eeEEE
Q 014454 121 QINHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTE---------------GYGLS 185 (424)
Q Consensus 121 ~~~h~~~v~~~~~~p~~~~~latg~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~h~~~---------------v~~l~ 185 (424)
...|...|.+++|+|++. +|++++.||.|++||+.. ......+..+... +.+++
T Consensus 145 ~~~~~~~v~~~~~~~~~~-~l~~~~~d~~i~iwd~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 213 (425)
T 1r5m_A 145 LNFHRAPIVSVKWNKDGT-HIISMDVENVTILWNVIS----------GTVMQHFELKETGGSSINAENHSGDGSLGVDVE 213 (425)
T ss_dssp ECCCCSCEEEEEECTTSS-EEEEEETTCCEEEEETTT----------TEEEEEECCC---------------CCCBSCCE
T ss_pred ccCCCccEEEEEECCCCC-EEEEEecCCeEEEEECCC----------CcEEEEeeccccCccceeeccccCCcceeeEEE
Confidence 346999999999999886 788999999999999976 3444555556555 99999
Q ss_pred ecCCCCceEEEEeCCCcEEEEeCCCCCCCCcccceeeeecCCccEeeEEEecCCCcEEEEEeCCCeEEEEEcCCCCCCCC
Q 014454 186 WSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKP 265 (424)
Q Consensus 186 ~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~dg~i~i~d~~~~~~~~~ 265 (424)
|+|++ .+++++.+|.|++||+.... .+..+..|...|.+++|+|++. +|++++.||.|++||++++..
T Consensus 214 ~~~~~--~~~~~~~~g~i~~~d~~~~~------~~~~~~~~~~~i~~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~--- 281 (425)
T 1r5m_A 214 WVDDD--KFVIPGPKGAIFVYQITEKT------PTGKLIGHHGPISVLEFNDTNK-LLLSASDDGTLRIWHGGNGNS--- 281 (425)
T ss_dssp EEETT--EEEEECGGGCEEEEETTCSS------CSEEECCCSSCEEEEEEETTTT-EEEEEETTSCEEEECSSSBSC---
T ss_pred EcCCC--EEEEEcCCCeEEEEEcCCCc------eeeeeccCCCceEEEEECCCCC-EEEEEcCCCEEEEEECCCCcc---
Confidence 99864 59999999999999998763 3455667999999999999987 567999999999999998654
Q ss_pred eeeeeccCCCeeEEEecCCCCeEEEEEeCCCcEEEEECCCCCCcceEecCCCCCEEEEEEcCCCCcEEEEEECCCeEEEe
Q 014454 266 VQSVVAHQSEVNCLAFNPFNEWILATGSTDKTVKLFDLRKISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVW 345 (424)
Q Consensus 266 ~~~~~~~~~~v~~v~~~~~~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~l~s~~~dg~i~iw 345 (424)
+..+..|...|.+++|+|++ ++++++.||.|++||+++ ..++..+..|...|.+++|+|++. +|++++.||.|++|
T Consensus 282 ~~~~~~~~~~i~~~~~~~~~--~l~~~~~d~~i~i~d~~~-~~~~~~~~~~~~~i~~~~~s~~~~-~l~~~~~dg~i~i~ 357 (425)
T 1r5m_A 282 QNCFYGHSQSIVSASWVGDD--KVISCSMDGSVRLWSLKQ-NTLLALSIVDGVPIFAGRISQDGQ-KYAVAFMDGQVNVY 357 (425)
T ss_dssp SEEECCCSSCEEEEEEETTT--EEEEEETTSEEEEEETTT-TEEEEEEECTTCCEEEEEECTTSS-EEEEEETTSCEEEE
T ss_pred ceEecCCCccEEEEEECCCC--EEEEEeCCCcEEEEECCC-CcEeEecccCCccEEEEEEcCCCC-EEEEEECCCeEEEE
Confidence 66777899999999999988 689999999999999998 678888999999999999999995 79999999999999
Q ss_pred eCCCCCcccCCCC-c-----CCCCCeeeEEEcCCCC--CcceEEeCCCCCcEEEEEeCCCcEEEEecC
Q 014454 346 DLSRIDEEQTPED-A-----EDGPPELLFIHGGHTS--KISDFSWNPCEDWVISSVAEDNILQIWQMA 405 (424)
Q Consensus 346 d~~~~~~~~~~~~-~-----~~~~~~~~~~~~~h~~--~v~~~~~~~~~~~~l~s~~~dg~i~vw~~~ 405 (424)
|++.......... . ...+..++..+.+|.. .|++++|+|+++ +|++++.||.|++|++.
T Consensus 358 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~-~l~~~~~dg~i~iw~~~ 424 (425)
T 1r5m_A 358 DLKKLNSKSRSLYGNRDGILNPLPIPLYASYQSSQDNDYIFDLSWNCAGN-KISVAYSLQEGSVVAIP 424 (425)
T ss_dssp ECHHHHC--------------CEECCEEEEECCTTCCCCEEEEEECTTSS-EEEEEESSSCCEEEECC
T ss_pred ECCCCccceeeeecccccccCcccchhhhhhcCcccCCceEEEEccCCCc-eEEEEecCceEEEEeec
Confidence 9987541110000 0 0011236788888976 999999999999 68899999999999986
No 64
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=100.00 E-value=6.1e-34 Score=265.63 Aligned_cols=259 Identities=17% Similarity=0.258 Sum_probs=199.3
Q ss_pred EEeccCCceeEEEecCCCCcEEEEEeCCCeEEEEeCCCCCCCCCCCCCCCCcEEE--ecCCCceeEEEecCCCCceEEEE
Q 014454 120 QQINHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRL--RGHSTEGYGLSWSKFKEGHLLSG 197 (424)
Q Consensus 120 ~~~~h~~~v~~~~~~p~~~~~latg~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~--~~h~~~v~~l~~~~~~~~~l~s~ 197 (424)
...+|.+.|++++|+|++..+||+|+.||.|+|||+.. ......+ .+|...|.+++|+|++..+|+++
T Consensus 68 ~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~----------~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~ 137 (383)
T 3ei3_B 68 TASPFDRRVTSLEWHPTHPTTVAVGSKGGDIILWDYDV----------QNKTSFIQGMGPGDAITGMKFNQFNTNQLFVS 137 (383)
T ss_dssp EECCCSSCEEEEEECSSCTTEEEEEEBTSCEEEEETTS----------TTCEEEECCCSTTCBEEEEEEETTEEEEEEEE
T ss_pred eccCCCCCEEEEEECCCCCCEEEEEcCCCeEEEEeCCC----------cccceeeecCCcCCceeEEEeCCCCCCEEEEE
Confidence 34579999999999999856999999999999999986 2333334 36999999999999544489999
Q ss_pred eCCCcEEEEeCCCCCCCCcccceeeeecCCccEeeEEEecCCCcEEEEEeCCCeEEEEEcCCCCCCCCeeeeeccCCCee
Q 014454 198 SDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVN 277 (424)
Q Consensus 198 ~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~ 277 (424)
+.||.|++||++.. ..........|...|.+++|+|++. +|++++.||.|++||++. .++..+..|...|.
T Consensus 138 ~~d~~i~iwd~~~~----~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~i~i~d~~~----~~~~~~~~h~~~v~ 208 (383)
T 3ei3_B 138 SIRGATTLRDFSGS----VIQVFAKTDSWDYWYCCVDVSVSRQ-MLATGDSTGRLLLLGLDG----HEIFKEKLHKAKVT 208 (383)
T ss_dssp ETTTEEEEEETTSC----EEEEEECCCCSSCCEEEEEEETTTT-EEEEEETTSEEEEEETTS----CEEEEEECSSSCEE
T ss_pred eCCCEEEEEECCCC----ceEEEeccCCCCCCeEEEEECCCCC-EEEEECCCCCEEEEECCC----CEEEEeccCCCcEE
Confidence 99999999999842 1222222334558899999999987 567999999999999942 24778889999999
Q ss_pred EEEecCCCCeEEEEEeCCCcEEEEECCCCC---CcceEecCCCCCEEEEEEcC-CCCcEEEEEECCCeEEEeeCCCCCcc
Q 014454 278 CLAFNPFNEWILATGSTDKTVKLFDLRKIS---TALHTFDSHKEEVFQVGWNP-KNETILASCCLGRRLMVWDLSRIDEE 353 (424)
Q Consensus 278 ~v~~~~~~~~~l~tg~~dg~i~iwd~~~~~---~~~~~~~~h~~~v~~~~~sp-~~~~~l~s~~~dg~i~iwd~~~~~~~ 353 (424)
+++|+|+++++|++|+.|+.|++||+++.. .++..+ .|...|.+++|+| ++. +|++++.|+.|++||++.....
T Consensus 209 ~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~-~l~~~~~d~~i~iwd~~~~~~~ 286 (383)
T 3ei3_B 209 HAEFNPRCDWLMATSSVDATVKLWDLRNIKDKNSYIAEM-PHEKPVNAAYFNPTDST-KLLTTDQRNEIRVYSSYDWSKP 286 (383)
T ss_dssp EEEECSSCTTEEEEEETTSEEEEEEGGGCCSTTCEEEEE-ECSSCEEEEEECTTTSC-EEEEEESSSEEEEEETTBTTSC
T ss_pred EEEECCCCCCEEEEEeCCCEEEEEeCCCCCcccceEEEe-cCCCceEEEEEcCCCCC-EEEEEcCCCcEEEEECCCCccc
Confidence 999999998679999999999999998732 344444 6899999999999 885 7999999999999999886543
Q ss_pred cCCCCcCCCCCeeeEEEcCCCC----------CcceEEeCCCCCcEEEEEeCCCcEEEEecCCccC
Q 014454 354 QTPEDAEDGPPELLFIHGGHTS----------KISDFSWNPCEDWVISSVAEDNILQIWQMAENIY 409 (424)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~~h~~----------~v~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~ 409 (424)
........ ....|.. .+..++|+|++++ +++.|+.|+|||+.++..
T Consensus 287 ~~~~~~~~-------~~~~~~~~~~~~~~p~~~~~~~~~s~dg~~---s~s~d~~i~iwd~~~~~~ 342 (383)
T 3ei3_B 287 DQIIIHPH-------RQFQHLTPIKATWHPMYDLIVAGRYPDDQL---LLNDKRTIDIYDANSGGL 342 (383)
T ss_dssp SEEEECCB-------CCCTTSCCCCCEECSSSSEEEEECBCCTTT---CTTCCCCEEEEETTTCCE
T ss_pred cccccccc-------cccccccceEEeccCCCCceEEEecCCccc---ccCCCCeEEEEecCCCce
Confidence 22110000 0011222 3344666666663 667899999999987653
No 65
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=100.00 E-value=1.3e-34 Score=275.69 Aligned_cols=266 Identities=17% Similarity=0.280 Sum_probs=201.7
Q ss_pred eccCCceeEEEecCCCCcEEEEEeCCCeEEEEeCCCCCCCC-CCCCCCCCcEEEecCC------------CceeEEEecC
Q 014454 122 INHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKP-PLDGACSPDLRLRGHS------------TEGYGLSWSK 188 (424)
Q Consensus 122 ~~h~~~v~~~~~~p~~~~~latg~~dg~v~iw~~~~~~~~~-~~~~~~~~~~~~~~h~------------~~v~~l~~~~ 188 (424)
+.|.+.|++++|+|++. +||+|+.||.|+||++....... ...........+.+|. ..|.+++|+|
T Consensus 25 ~~~~~~V~~v~~s~~g~-~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~ 103 (447)
T 3dw8_B 25 VAEADIISTVEFNHSGE-LLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLP 103 (447)
T ss_dssp CCGGGSEEEEEECSSSS-EEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEECC
T ss_pred ccccCcEEEEEECCCCC-EEEEEcCCCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEEEcC
Confidence 45688999999999886 89999999999999998632110 0011122466788998 8899999999
Q ss_pred CCC-ceEEEEeCCCcEEEEeCCCCCCC-------------------Ccc--------------cceee-eecCCccEeeE
Q 014454 189 FKE-GHLLSGSDDAQICLWDINAAPKN-------------------KSL--------------EAMQI-FKVHEGVVEDV 233 (424)
Q Consensus 189 ~~~-~~l~s~~~dg~i~iwd~~~~~~~-------------------~~~--------------~~~~~-~~~~~~~v~~~ 233 (424)
++. .+|++++.||.|++||+...... ..+ .+... ..+|...|.++
T Consensus 104 ~~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~ 183 (447)
T 3dw8_B 104 QKNAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHINSI 183 (447)
T ss_dssp CCSSSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCCEE
T ss_pred CCCcceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcceEEE
Confidence 873 37999999999999998753210 000 00112 35799999999
Q ss_pred EEecCCCcEEEEEeCCCeEEEEEcCCCCCCCCee-------eeeccCCCeeEEEecCCCCeEEEEEeCCCcEEEEECCCC
Q 014454 234 AWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQ-------SVVAHQSEVNCLAFNPFNEWILATGSTDKTVKLFDLRKI 306 (424)
Q Consensus 234 ~~~~~~~~~~~s~~~dg~i~i~d~~~~~~~~~~~-------~~~~~~~~v~~v~~~~~~~~~l~tg~~dg~i~iwd~~~~ 306 (424)
+|+|++. +|++| .|+.|++||++.... .+. .+..|...|++++|+|++..+|++|+.||.|++||+++
T Consensus 184 ~~~~~~~-~l~s~-~d~~i~iwd~~~~~~--~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~- 258 (447)
T 3dw8_B 184 SINSDYE-TYLSA-DDLRINLWHLEITDR--SFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDMRA- 258 (447)
T ss_dssp EECTTSS-EEEEE-CSSEEEEEETTEEEE--EEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEEEETTT-
T ss_pred EEcCCCC-EEEEe-CCCeEEEEECCCCCc--eeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeEEEEECcC-
Confidence 9999986 55677 799999999984321 122 34578999999999999844899999999999999998
Q ss_pred CCc----ceEecCCCC------------CEEEEEEcCCCCcEEEEEECCCeEEEeeCCCCCcccCCCCcCCCCCeeeEEE
Q 014454 307 STA----LHTFDSHKE------------EVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPEDAEDGPPELLFIH 370 (424)
Q Consensus 307 ~~~----~~~~~~h~~------------~v~~~~~sp~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 370 (424)
... +..+..|.. .|.+++|+|++. +|++++. +.|+|||++... .++..+
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~-~l~~~~~-~~v~iwd~~~~~-------------~~~~~~ 323 (447)
T 3dw8_B 259 SALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGR-YMMTRDY-LSVKVWDLNMEN-------------RPVETY 323 (447)
T ss_dssp CSSSCTTCEEECCC-----CCHHHHHTTCEEEEEECTTSS-EEEEEES-SEEEEEETTCCS-------------SCSCCE
T ss_pred CccccceeeEeccCCCccccccccccCceEEEEEECCCCC-EEEEeeC-CeEEEEeCCCCc-------------ccccee
Confidence 444 678888876 999999999996 7888888 999999998622 233444
Q ss_pred cCCCCC---------------cceEEeCCCCCcEEEEEeCCCcEEEEecCCccC
Q 014454 371 GGHTSK---------------ISDFSWNPCEDWVISSVAEDNILQIWQMAENIY 409 (424)
Q Consensus 371 ~~h~~~---------------v~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~ 409 (424)
.+|... +..++|+|+++ .|++++.||.|++||+.++..
T Consensus 324 ~~~~~~~~~l~~~~~~~~i~~~~~~~~s~~~~-~l~s~s~dg~v~iwd~~~~~~ 376 (447)
T 3dw8_B 324 QVHEYLRSKLCSLYENDCIFDKFECCWNGSDS-VVMTGSYNNFFRMFDRNTKRD 376 (447)
T ss_dssp ESCGGGTTTHHHHHHTSGGGCCCCEEECTTSS-EEEEECSTTEEEEEETTTCCE
T ss_pred eccccccccccccccccccccceEEEECCCCC-EEEEeccCCEEEEEEcCCCcc
Confidence 555432 23499999999 689999999999999988753
No 66
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.1e-34 Score=290.03 Aligned_cols=260 Identities=19% Similarity=0.304 Sum_probs=214.1
Q ss_pred EeccCCceeEEEecCCCCcEEEEEeCCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCceeEEEecCC--CCceEEEEe
Q 014454 121 QINHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKF--KEGHLLSGS 198 (424)
Q Consensus 121 ~~~h~~~v~~~~~~p~~~~~latg~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~--~~~~l~s~~ 198 (424)
..+|.+.|++++|+|++. +|++|+.||.|+||++.. ........+.+|...|++++|+|+ +. +|++|+
T Consensus 5 l~gH~~~V~~l~~s~dg~-~latg~~dg~I~vwd~~~--------~~~~~~~~l~~h~~~V~~l~~s~~~~~~-~l~s~s 74 (753)
T 3jro_A 5 ANAHNELIHDAVLDYYGK-RLATCSSDKTIKIFEVEG--------ETHKLIDTLTGHEGPVWRVDWAHPKFGT-ILASCS 74 (753)
T ss_dssp ---CCCCEEEECCCSSSC-CEEEEETTTEEEEEEEET--------TEEEEEEEECCCSSCEEEEEECCTTSCS-EEEEEE
T ss_pred cccCcceeEEEEECCCCC-eEEEEECCCcEEEEecCC--------CCCccceeccCCcCceEEEEecCCCCCC-EEEEEe
Confidence 347999999999999987 799999999999999874 224556778899999999999987 55 899999
Q ss_pred CCCcEEEEeCCCCCCCCcccceeeeecCCccEeeEEEecC--CCcEEEEEeCCCeEEEEEcCCCCCCCCeeeeeccCCCe
Q 014454 199 DDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLR--HEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEV 276 (424)
Q Consensus 199 ~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~~~~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v 276 (424)
.||.|++||+.++. ......+..|...|.+++|+|+ +. ++++|+.||.|++||++.+.. .....+..|...|
T Consensus 75 ~Dg~I~vwd~~~~~----~~~~~~~~~h~~~V~~v~~sp~~~~~-~l~sgs~dg~I~vwdl~~~~~-~~~~~~~~~~~~v 148 (753)
T 3jro_A 75 YDGKVLIWKEENGR----WSQIAVHAVHSASVNSVQWAPHEYGP-LLLVASSDGKVSVVEFKENGT-TSPIIIDAHAIGV 148 (753)
T ss_dssp TTSCEEEEEEETTE----EEEEEEECCCSSCEEEEEECCGGGCS-EEEEEETTSEEEEEECCSSSC-CCCEEEECCSSCE
T ss_pred CCCeEEEEECCCCc----ccccccccCCCCCeEEEEECCCCCCC-EEEEEeCCCcEEEEEeecCCC-cceeEeecCCCce
Confidence 99999999998652 2245667789999999999998 65 677999999999999998753 2345667899999
Q ss_pred eEEEecCC-------------CCeEEEEEeCCCcEEEEECCCCC---CcceEecCCCCCEEEEEEcCCC--CcEEEEEEC
Q 014454 277 NCLAFNPF-------------NEWILATGSTDKTVKLFDLRKIS---TALHTFDSHKEEVFQVGWNPKN--ETILASCCL 338 (424)
Q Consensus 277 ~~v~~~~~-------------~~~~l~tg~~dg~i~iwd~~~~~---~~~~~~~~h~~~v~~~~~sp~~--~~~l~s~~~ 338 (424)
.+++|+|. +. +|++|+.||.|++||++... .+...+.+|...|++++|+|++ ..+|++++.
T Consensus 149 ~~l~~~p~~~~~~~~~~~~~d~~-~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~~~~l~s~s~ 227 (753)
T 3jro_A 149 NSASWAPATIEEDGEHNGTKESR-KFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQ 227 (753)
T ss_dssp EEEEECCCC---------CGGGC-CEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEES
T ss_pred EEEEecCcccccccccccCCCCC-EEEEEECCCeEEEEeccCCcccceeeeeecCCCCcEEEEEeccCCCCCCEEEEEec
Confidence 99999994 55 69999999999999998743 4556788999999999999993 358999999
Q ss_pred CCeEEEeeCCCCCcccCCCCcCCCCCeeeEEEcCCCCCcceEEeCCCCCcEEEEEeCCCcEEEEecCCc
Q 014454 339 GRRLMVWDLSRIDEEQTPEDAEDGPPELLFIHGGHTSKISDFSWNPCEDWVISSVAEDNILQIWQMAEN 407 (424)
Q Consensus 339 dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~ 407 (424)
||.|++||++....... ..+....+|...|++++|+|+++ +|++++.||.|++|++..+
T Consensus 228 Dg~I~iwd~~~~~~~~~---------~~~~~~~~~~~~v~~l~~spdg~-~l~s~s~Dg~I~vwd~~~~ 286 (753)
T 3jro_A 228 DRTCIIWTQDNEQGPWK---------KTLLKEEKFPDVLWRASWSLSGN-VLALSGGDNKVTLWKENLE 286 (753)
T ss_dssp SSCEEEEEESSSSSCCB---------CCBSSSSCCSSCCCCEEECTTTC-CEEEECSSSCEECCBCCSS
T ss_pred CCEEEEecCCCCCCcce---------eEEeccCCCCCceEEEEEcCCCC-EEEEEcCCCEEEEEecCCC
Confidence 99999999987532111 12223356788999999999999 5899999999999999853
No 67
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=100.00 E-value=1.1e-33 Score=265.68 Aligned_cols=257 Identities=19% Similarity=0.310 Sum_probs=208.4
Q ss_pred ceeEEEecCCCCcEEEEEeCCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCceeEEEecC-CCCceEEEEeCCCcEEE
Q 014454 127 EVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSK-FKEGHLLSGSDDAQICL 205 (424)
Q Consensus 127 ~v~~~~~~p~~~~~latg~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~-~~~~~l~s~~~dg~i~i 205 (424)
....++++|+...++++|+.+|.|+||++...... ......+.+|...|++++|+| ++. +|++|+.||.|++
T Consensus 36 ~~~~~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~------~~~~~~~~~h~~~V~~~~~~p~~~~-~l~s~s~dg~v~v 108 (402)
T 2aq5_A 36 DSGFCAVNPKFMALICEASGGGAFLVLPLGKTGRV------DKNVPLVCGHTAPVLDIAWCPHNDN-VIASGSEDCTVMV 108 (402)
T ss_dssp SSCSEEECSSEEEEEBCCSSSCCEEEEETTCCEEC------CTTCCCBCCCSSCEEEEEECTTCTT-EEEEEETTSEEEE
T ss_pred CCCcEEECCCeEEEEEEEcCCCEEEEEECccCCCC------CCCCceEecCCCCEEEEEeCCCCCC-EEEEEeCCCeEEE
Confidence 45568899987666777899999999999652111 123445788999999999999 555 8999999999999
Q ss_pred EeCCCCCCCCcc-cceeeeecCCccEeeEEEecCCCcEEEEEeCCCeEEEEEcCCCCCCCCeeee--eccCCCeeEEEec
Q 014454 206 WDINAAPKNKSL-EAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSV--VAHQSEVNCLAFN 282 (424)
Q Consensus 206 wd~~~~~~~~~~-~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~dg~i~i~d~~~~~~~~~~~~~--~~~~~~v~~v~~~ 282 (424)
||+..+...... .++..+.+|...|.+++|+|++..+|++++.||.|++||+++++. +..+ ..|...|++++|+
T Consensus 109 w~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~---~~~~~~~~~~~~v~~~~~~ 185 (402)
T 2aq5_A 109 WEIPDGGLVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAA---VLTLGPDVHPDTIYSVDWS 185 (402)
T ss_dssp EECCTTCCSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETTSCEEEEETTTTEE---EEEECTTTCCSCEEEEEEC
T ss_pred EEccCCCCccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCCCEEEEEECCCCCc---cEEEecCCCCCceEEEEEC
Confidence 999876432211 345667889999999999999877888999999999999998653 6666 6799999999999
Q ss_pred CCCCeEEEEEeCCCcEEEEECCCCCCcceEe-cCCCCC-EEEEEEcCCCCcEEEEE---ECCCeEEEeeCCCCCcccCCC
Q 014454 283 PFNEWILATGSTDKTVKLFDLRKISTALHTF-DSHKEE-VFQVGWNPKNETILASC---CLGRRLMVWDLSRIDEEQTPE 357 (424)
Q Consensus 283 ~~~~~~l~tg~~dg~i~iwd~~~~~~~~~~~-~~h~~~-v~~~~~sp~~~~~l~s~---~~dg~i~iwd~~~~~~~~~~~ 357 (424)
|++. +|++++.||.|++||+++ +..+..+ ..|... +.+++|+|++. +|++| +.|+.|++||++....
T Consensus 186 ~~~~-~l~~~~~d~~i~iwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~g~~~~~d~~i~iwd~~~~~~----- 257 (402)
T 2aq5_A 186 RDGA-LICTSCRDKRVRVIEPRK-GTVVAEKDRPHEGTRPVHAVFVSEGK-ILTTGFSRMSERQVALWDTKHLEE----- 257 (402)
T ss_dssp TTSS-CEEEEETTSEEEEEETTT-TEEEEEEECSSCSSSCCEEEECSTTE-EEEEEECTTCCEEEEEEETTBCSS-----
T ss_pred CCCC-EEEEEecCCcEEEEeCCC-CceeeeeccCCCCCcceEEEEcCCCc-EEEEeccCCCCceEEEEcCccccC-----
Confidence 9888 699999999999999998 6777777 678776 89999999985 78888 6899999999987542
Q ss_pred CcCCCCCeeeEEEcCCCCCcceEEeCCCCCcEEEEEeCCCcEEEEecCCcc
Q 014454 358 DAEDGPPELLFIHGGHTSKISDFSWNPCEDWVISSVAEDNILQIWQMAENI 408 (424)
Q Consensus 358 ~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~ 408 (424)
........|...+..++|+|++.+++++++.||.|++|++.++.
T Consensus 258 -------~~~~~~~~~~~~v~~~~~s~~~~~l~~~g~~dg~i~i~d~~~~~ 301 (402)
T 2aq5_A 258 -------PLSLQELDTSSGVLLPFFDPDTNIVYLCGKGDSSIRYFEITSEA 301 (402)
T ss_dssp -------CSEEEECCCCSSCEEEEEETTTTEEEEEETTCSCEEEEEECSST
T ss_pred -------CceEEeccCCCceeEEEEcCCCCEEEEEEcCCCeEEEEEecCCC
Confidence 11222235667799999999999655677789999999998765
No 68
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=100.00 E-value=8.2e-33 Score=261.05 Aligned_cols=254 Identities=13% Similarity=0.203 Sum_probs=201.9
Q ss_pred ccCCceeEEEecCCCCcEEEEEeCCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCceeEEEecCCCCceEEEEeCCCc
Q 014454 123 NHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDDAQ 202 (424)
Q Consensus 123 ~h~~~v~~~~~~p~~~~~latg~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~ 202 (424)
.|.+.|++++|+|++. +|++|+.||.|++||+.. ......+.+|...|.+++|+|++. +|++++.||.
T Consensus 137 ~h~~~v~~~~~~~~~~-~l~s~s~d~~i~iwd~~~----------~~~~~~~~~h~~~v~~~~~~~~~~-~l~s~~~d~~ 204 (420)
T 3vl1_A 137 AHVSEITKLKFFPSGE-ALISSSQDMQLKIWSVKD----------GSNPRTLIGHRATVTDIAIIDRGR-NVLSASLDGT 204 (420)
T ss_dssp SSSSCEEEEEECTTSS-EEEEEETTSEEEEEETTT----------CCCCEEEECCSSCEEEEEEETTTT-EEEEEETTSC
T ss_pred cccCccEEEEECCCCC-EEEEEeCCCeEEEEeCCC----------CcCceEEcCCCCcEEEEEEcCCCC-EEEEEcCCCc
Confidence 7999999999999886 899999999999999987 455678899999999999999887 7999999999
Q ss_pred EEEEeCCCCCCCCcccceeeeec---C---------------------CccEeeEEEecCCCcEEEEEeCCCeEEEEEcC
Q 014454 203 ICLWDINAAPKNKSLEAMQIFKV---H---------------------EGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLR 258 (424)
Q Consensus 203 i~iwd~~~~~~~~~~~~~~~~~~---~---------------------~~~v~~~~~~~~~~~~~~s~~~dg~i~i~d~~ 258 (424)
|++||++++.. +..+.. + ...+.+++|+|++. ++++++.||.|++||++
T Consensus 205 v~iwd~~~~~~------~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~-~l~~~~~dg~i~i~d~~ 277 (420)
T 3vl1_A 205 IRLWECGTGTT------IHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGK-YVIAGHVSGVITVHNVF 277 (420)
T ss_dssp EEEEETTTTEE------EEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTE-EEEEEETTSCEEEEETT
T ss_pred EEEeECCCCce------eEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCCC-EEEEEcCCCeEEEEECC
Confidence 99999987632 222222 2 34555666678775 56799999999999999
Q ss_pred CCCCCCCeeee-eccCCCeeEEEecCCCCeEEEEEeCCCcEEEEECCCCCCcceEecC-CCCCEEEEEEcCCCCcEEEEE
Q 014454 259 TPSVSKPVQSV-VAHQSEVNCLAFNPFNEWILATGSTDKTVKLFDLRKISTALHTFDS-HKEEVFQVGWNPKNETILASC 336 (424)
Q Consensus 259 ~~~~~~~~~~~-~~~~~~v~~v~~~~~~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~~-h~~~v~~~~~sp~~~~~l~s~ 336 (424)
++.. +..+ ..|...|++++|+|++..+|++|+.||.|++||+++...++..+.. |...|.++.|. ++ .+|+++
T Consensus 278 ~~~~---~~~~~~~~~~~v~~~~~~~~~~~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~~-~~-~~l~s~ 352 (420)
T 3vl1_A 278 SKEQ---TIQLPSKFTCSCNSLTVDGNNANYIYAGYENGMLAQWDLRSPECPVGEFLINEGTPINNVYFA-AG-ALFVSS 352 (420)
T ss_dssp TCCE---EEEECCTTSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEEESTTSCEEEEEEE-TT-EEEEEE
T ss_pred CCce---eEEcccccCCCceeEEEeCCCCCEEEEEeCCCeEEEEEcCCCcCchhhhhccCCCCceEEEeC-CC-CEEEEe
Confidence 8663 3333 4578899999999999867999999999999999986666777776 67788888665 55 489999
Q ss_pred ECCCeEEEeeCCCCCcccCCCCcCCCCCeeeEEEcCCCCCcceEEeCCCCC---cEEEEEeCCCcEEEEecCC
Q 014454 337 CLGRRLMVWDLSRIDEEQTPEDAEDGPPELLFIHGGHTSKISDFSWNPCED---WVISSVAEDNILQIWQMAE 406 (424)
Q Consensus 337 ~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~---~~l~s~~~dg~i~vw~~~~ 406 (424)
+.|+.|++|++........... ........+|...|.+++|+|+++ .++ +++.+|.+.+|++..
T Consensus 353 ~~d~~v~iw~~~~~~~~~~~~~-----~~~~~~~~~~~~~v~~~~~s~~~~~~g~l~-a~g~~g~~~~~~~~~ 419 (420)
T 3vl1_A 353 GFDTSIKLDIISDPESERPAIE-----FETPTFLVSNDDAVSQFCYVSDDESNGEVL-EVGKNNFCALYNLSN 419 (420)
T ss_dssp TTTEEEEEEEECCTTCCSCEEC-----TTSCEEECCSSCCCCEEEEECCSSSSCEEE-EEETTTEEEEEESCC
T ss_pred cCCccEEEEeccCCCCCcccee-----ccCccEEccCCcceEEEEEccCCCCcceEE-EEcCCceEEEEeccC
Confidence 9999999999987433221110 011233567888999999999988 545 456789999999864
No 69
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=100.00 E-value=6.5e-33 Score=283.63 Aligned_cols=250 Identities=24% Similarity=0.359 Sum_probs=216.5
Q ss_pred EeccCCceeEEEecCCCCcEEEEEeCCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCceeEEEecCCCCceEEEEeCC
Q 014454 121 QINHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDD 200 (424)
Q Consensus 121 ~~~h~~~v~~~~~~p~~~~~latg~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~d 200 (424)
..+|.+.|++++|+|+++ +||+|+.+|.|+|||+.+ ......+.+|...|.+++|+|++. +|++|+.|
T Consensus 9 ~~~h~~~v~~i~~sp~~~-~la~~~~~g~v~iwd~~~----------~~~~~~~~~~~~~v~~~~~s~~~~-~l~~~~~d 76 (814)
T 3mkq_A 9 FSNRSDRVKGIDFHPTEP-WVLTTLYSGRVEIWNYET----------QVEVRSIQVTETPVRAGKFIARKN-WIIVGSDD 76 (814)
T ss_dssp EEEECSCEEEEEECSSSS-EEEEEETTSEEEEEETTT----------TEEEEEEECCSSCEEEEEEEGGGT-EEEEEETT
T ss_pred eecCCCceEEEEECCCCC-EEEEEeCCCEEEEEECCC----------CceEEEEecCCCcEEEEEEeCCCC-EEEEEeCC
Confidence 357999999999999987 899999999999999987 456678889999999999999988 79999999
Q ss_pred CcEEEEeCCCCCCCCcccceeeeecCCccEeeEEEecCCCcEEEEEeCCCeEEEEEcCCCCCCCCeeeeeccCCCeeEEE
Q 014454 201 AQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLA 280 (424)
Q Consensus 201 g~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~v~ 280 (424)
|.|++||+.++. .+..+.+|...|++++|+|+++. +++++.||.|++||++++.. ....+..|...|.+++
T Consensus 77 g~i~vw~~~~~~------~~~~~~~~~~~v~~~~~s~~~~~-l~~~~~dg~i~vw~~~~~~~--~~~~~~~~~~~v~~~~ 147 (814)
T 3mkq_A 77 FRIRVFNYNTGE------KVVDFEAHPDYIRSIAVHPTKPY-VLSGSDDLTVKLWNWENNWA--LEQTFEGHEHFVMCVA 147 (814)
T ss_dssp SEEEEEETTTCC------EEEEEECCSSCEEEEEECSSSSE-EEEEETTSEEEEEEGGGTSE--EEEEEECCSSCEEEEE
T ss_pred CeEEEEECCCCc------EEEEEecCCCCEEEEEEeCCCCE-EEEEcCCCEEEEEECCCCce--EEEEEcCCCCcEEEEE
Confidence 999999998763 45667789999999999999875 56999999999999987632 3566778999999999
Q ss_pred ecCCCCeEEEEEeCCCcEEEEECCCCCCcceEecCC-CCCEEEEEEcC--CCCcEEEEEECCCeEEEeeCCCCCcccCCC
Q 014454 281 FNPFNEWILATGSTDKTVKLFDLRKISTALHTFDSH-KEEVFQVGWNP--KNETILASCCLGRRLMVWDLSRIDEEQTPE 357 (424)
Q Consensus 281 ~~~~~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~~h-~~~v~~~~~sp--~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~ 357 (424)
|+|.+..+|++++.||.|++||++. ..+...+..+ ...+.+++|+| ++. +|++++.||.|++||+...
T Consensus 148 ~~p~~~~~l~~~~~dg~v~vwd~~~-~~~~~~~~~~~~~~v~~~~~~~~~~~~-~l~~~~~dg~i~~~d~~~~------- 218 (814)
T 3mkq_A 148 FNPKDPSTFASGCLDRTVKVWSLGQ-STPNFTLTTGQERGVNYVDYYPLPDKP-YMITASDDLTIKIWDYQTK------- 218 (814)
T ss_dssp EETTEEEEEEEEETTSEEEEEETTC-SSCSEEEECCCTTCCCEEEECCSTTCC-EEEEECTTSEEEEEETTTT-------
T ss_pred EEcCCCCEEEEEeCCCeEEEEECCC-CcceeEEecCCCCCEEEEEEEECCCCC-EEEEEeCCCEEEEEECCCC-------
Confidence 9994334799999999999999987 4555555544 48999999999 775 7999999999999999764
Q ss_pred CcCCCCCeeeEEEcCCCCCcceEEeCCCCCcEEEEEeCCCcEEEEecCCcc
Q 014454 358 DAEDGPPELLFIHGGHTSKISDFSWNPCEDWVISSVAEDNILQIWQMAENI 408 (424)
Q Consensus 358 ~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~ 408 (424)
..+..+.+|...|.+++|+|+++ +|++++.||.|++|++.++.
T Consensus 219 -------~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~dg~v~vwd~~~~~ 261 (814)
T 3mkq_A 219 -------SCVATLEGHMSNVSFAVFHPTLP-IIISGSEDGTLKIWNSSTYK 261 (814)
T ss_dssp -------EEEEEEECCSSCEEEEEECSSSS-EEEEEETTSCEEEEETTTCS
T ss_pred -------cEEEEEcCCCCCEEEEEEcCCCC-EEEEEeCCCeEEEEECCCCc
Confidence 55777888999999999999999 79999999999999998764
No 70
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=100.00 E-value=1.7e-33 Score=265.69 Aligned_cols=244 Identities=15% Similarity=0.143 Sum_probs=195.5
Q ss_pred CceeEEEecCCCCcEEEEEeCCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCceeEEEecCCCCceEEEEeCCCcEEE
Q 014454 126 GEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDDAQICL 205 (424)
Q Consensus 126 ~~v~~~~~~p~~~~~latg~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~i 205 (424)
..+....|+|++. +||+|+.||.|+|||+.. ......+.+|...|.+++|+|++. +|++|+.||.|++
T Consensus 98 ~~~~~~~~~~~~~-~l~~~~~dg~i~iwd~~~----------~~~~~~~~~h~~~v~~~~~~~~~~-~l~s~s~d~~i~i 165 (420)
T 3vl1_A 98 DYTAVDTAKLQMR-RFILGTTEGDIKVLDSNF----------NLQREIDQAHVSEITKLKFFPSGE-ALISSSQDMQLKI 165 (420)
T ss_dssp CEEEEEEECSSSC-EEEEEETTSCEEEECTTS----------CEEEEETTSSSSCEEEEEECTTSS-EEEEEETTSEEEE
T ss_pred CceEEEEEecCCC-EEEEEECCCCEEEEeCCC----------cceeeecccccCccEEEEECCCCC-EEEEEeCCCeEEE
Confidence 3444557888876 899999999999999876 344455578999999999999887 8999999999999
Q ss_pred EeCCCCCCCCcccceeeeecCCccEeeEEEecCCCcEEEEEeCCCeEEEEEcCCCCCCCCeeeeec---c----------
Q 014454 206 WDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVA---H---------- 272 (424)
Q Consensus 206 wd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~dg~i~i~d~~~~~~~~~~~~~~~---~---------- 272 (424)
||+.++. .+..+.+|...|.+++|+|++. +|++++.||.|++||+++++. +..+.. +
T Consensus 166 wd~~~~~------~~~~~~~h~~~v~~~~~~~~~~-~l~s~~~d~~v~iwd~~~~~~---~~~~~~~~~~~~~v~~~~~~ 235 (420)
T 3vl1_A 166 WSVKDGS------NPRTLIGHRATVTDIAIIDRGR-NVLSASLDGTIRLWECGTGTT---IHTFNRKENPHDGVNSIALF 235 (420)
T ss_dssp EETTTCC------CCEEEECCSSCEEEEEEETTTT-EEEEEETTSCEEEEETTTTEE---EEEECBTTBTTCCEEEEEEE
T ss_pred EeCCCCc------CceEEcCCCCcEEEEEEcCCCC-EEEEEcCCCcEEEeECCCCce---eEEeecCCCCCCCccEEEEe
Confidence 9998764 3455678999999999999986 556999999999999998653 444432 2
Q ss_pred -----------CCCeeEEEecCCCCeEEEEEeCCCcEEEEECCCCCCcceEecCCCCCEEEEEEcCCCCcEEEEEECCCe
Q 014454 273 -----------QSEVNCLAFNPFNEWILATGSTDKTVKLFDLRKISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRR 341 (424)
Q Consensus 273 -----------~~~v~~v~~~~~~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~l~s~~~dg~ 341 (424)
...+.+++|+|++. +|++|+.||.|++||+++..........|...|.+++|+|+++.+|++++.||.
T Consensus 236 ~~~~~~~~~~~~~~v~~~~~s~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~g~~dg~ 314 (420)
T 3vl1_A 236 VGTDRQLHEISTSKKNNLEFGTYGK-YVIAGHVSGVITVHNVFSKEQTIQLPSKFTCSCNSLTVDGNNANYIYAGYENGM 314 (420)
T ss_dssp ECCCSSCGGGCCCCCCTTCSSCTTE-EEEEEETTSCEEEEETTTCCEEEEECCTTSSCEEEEEECSSCTTEEEEEETTSE
T ss_pred cCCcceeeecccCcccceEEcCCCC-EEEEEcCCCeEEEEECCCCceeEEcccccCCCceeEEEeCCCCCEEEEEeCCCe
Confidence 34555666788887 699999999999999998444444445688999999999999768999999999
Q ss_pred EEEeeCCCCCcccCCCCcCCCCCeeeEEEcC-CCCCcceEEeCCCCCcEEEEEeCCCcEEEEecCCc
Q 014454 342 LMVWDLSRIDEEQTPEDAEDGPPELLFIHGG-HTSKISDFSWNPCEDWVISSVAEDNILQIWQMAEN 407 (424)
Q Consensus 342 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~-h~~~v~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~ 407 (424)
|++||++... .++..+.+ |...|..+.|. ++. +|++++.|+.|++|++...
T Consensus 315 i~vwd~~~~~-------------~~~~~~~~~~~~~v~~~~~~-~~~-~l~s~~~d~~v~iw~~~~~ 366 (420)
T 3vl1_A 315 LAQWDLRSPE-------------CPVGEFLINEGTPINNVYFA-AGA-LFVSSGFDTSIKLDIISDP 366 (420)
T ss_dssp EEEEETTCTT-------------SCSEEEEESTTSCEEEEEEE-TTE-EEEEETTTEEEEEEEECCT
T ss_pred EEEEEcCCCc-------------CchhhhhccCCCCceEEEeC-CCC-EEEEecCCccEEEEeccCC
Confidence 9999998753 22333444 66778888664 666 7999999999999999873
No 71
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=100.00 E-value=1.2e-31 Score=243.23 Aligned_cols=253 Identities=22% Similarity=0.410 Sum_probs=207.4
Q ss_pred EEEEEeccCCceeEEEecCCCCcEEEEEeCCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCceeEEEecCCCCceEEE
Q 014454 117 QIIQQINHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLS 196 (424)
Q Consensus 117 ~~~~~~~h~~~v~~~~~~p~~~~~latg~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s 196 (424)
+.+....|...|++++|+|+++ +||+|+.||+|+||++.+ .+....+.+|...+.++.+.+ . ++++
T Consensus 59 ~~~~~~~~~~~V~~v~~~~~~~-~l~sgs~Dg~v~iw~~~~----------~~~~~~~~~h~~~~~~~~~~~--~-~l~s 124 (318)
T 4ggc_A 59 QLLQMEQPGEYISSVAWIKEGN-YLAVGTSSAEVQLWDVQQ----------QKRLRNMTSHSARVGSLSWNS--Y-ILSS 124 (318)
T ss_dssp EEEECCSTTCCEEEEEECTTSS-EEEEEETTSEEEEEETTT----------TEEEEEEECCSSCEEEEEEET--T-EEEE
T ss_pred EEEEecCCCCeEEEEEECCCCC-EEEEEECCCcEEEeecCC----------ceeEEEecCccceEEEeecCC--C-EEEE
Confidence 3344446889999999999886 899999999999999987 466778889999888777653 4 7999
Q ss_pred EeCCCcEEEEeCCCCCCCCcccceeeeecCCccEeeEEEecCCCcEEEEEeCCCeEEEEEcCCCCCC-CCeeeeeccCCC
Q 014454 197 GSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVS-KPVQSVVAHQSE 275 (424)
Q Consensus 197 ~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~dg~i~i~d~~~~~~~-~~~~~~~~~~~~ 275 (424)
++.++.+++|+..... ..+..+.+|...+..+.+++.+. ++++++.||.|++||+++++.. ........+...
T Consensus 125 ~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~-~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~ 198 (318)
T 4ggc_A 125 GSRSGHIHHHDVRVAE-----HHVATLSGHSQEVCGLRWAPDGR-HLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGA 198 (318)
T ss_dssp EETTSEEEEEETTSSS-----CEEEEEECCSSCEEEEEECTTSS-EEEEEETTSCEEEEESSCBTTBSCCSEEECCCCSC
T ss_pred EecCCceEeeecCCCc-----eeEEEEcCccCceEEEEEcCCCC-EEEEEecCcceeEEECCCCcccccceeeecccCCc
Confidence 9999999999987653 24566778999999999999987 5569999999999999986532 234455678889
Q ss_pred eeEEEecCCCCeEEE--EEeCCCcEEEEECCCCCCcceEecCCCCCEEEEEEcCCCCcEEEE-EECCCeEEEeeCCCCCc
Q 014454 276 VNCLAFNPFNEWILA--TGSTDKTVKLFDLRKISTALHTFDSHKEEVFQVGWNPKNETILAS-CCLGRRLMVWDLSRIDE 352 (424)
Q Consensus 276 v~~v~~~~~~~~~l~--tg~~dg~i~iwd~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~l~s-~~~dg~i~iwd~~~~~~ 352 (424)
|.+++++|.+..++. +++.++.|++||.+. .... ....+...+..+.|+|.+..++++ ++.|+.|+|||++++
T Consensus 199 v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~~-~~~~-~~~~~~~~v~~~~~~~~~~~~~~~sg~~d~~i~iwd~~~~-- 274 (318)
T 4ggc_A 199 VKAVAWCPWQSNVLATGGGTSDRHIRIWNVCS-GACL-SAVDAHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTM-- 274 (318)
T ss_dssp EEEEEECTTSTTEEEEEECTTTCEEEEEETTT-CCEE-EEEECSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTC--
T ss_pred eEEEEecCCCCcEEEEEecCCCCEEEEEeccc-cccc-ccccceeeeeeeeecccccceEEEEEcCCCEEEEEECCCC--
Confidence 999999998876654 556789999999987 3333 334567889999999999754433 337999999999875
Q ss_pred ccCCCCcCCCCCeeeEEEcCCCCCcceEEeCCCCCcEEEEEeCCCcEEEEecCC
Q 014454 353 EQTPEDAEDGPPELLFIHGGHTSKISDFSWNPCEDWVISSVAEDNILQIWQMAE 406 (424)
Q Consensus 353 ~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~vw~~~~ 406 (424)
+++..+.+|.+.|++++|+|+++ +|+|++.||+|+|||+.+
T Consensus 275 ------------~~~~~l~gH~~~V~~l~~spdg~-~l~S~s~D~~v~iWd~~~ 315 (318)
T 4ggc_A 275 ------------AKVAELKGHTSRVLSLTMSPDGA-TVASAAADETLRLWRCFE 315 (318)
T ss_dssp ------------CEEEEECCCSSCEEEEEECTTSS-CEEEEETTTEEEEECCSC
T ss_pred ------------cEEEEEcCCCCCEEEEEEcCCCC-EEEEEecCCeEEEEECCC
Confidence 66788899999999999999999 699999999999999864
No 72
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=100.00 E-value=1.4e-33 Score=265.07 Aligned_cols=260 Identities=18% Similarity=0.271 Sum_probs=206.4
Q ss_pred eccCCceeEEEecCCCCcEEEEEeCCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCceeEEEecCCCCceEEEEeCCC
Q 014454 122 INHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDDA 201 (424)
Q Consensus 122 ~~h~~~v~~~~~~p~~~~~latg~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg 201 (424)
.+|.+.|++++|+|.+..+||+|+.||.|+||++....... ....+...+.+|...|.+++|+|++..+|++|+.||
T Consensus 78 ~~h~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~~~~---~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg 154 (402)
T 2aq5_A 78 CGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLVL---PLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCDN 154 (402)
T ss_dssp CCCSSCEEEEEECTTCTTEEEEEETTSEEEEEECCTTCCSS---CBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETTS
T ss_pred ecCCCCEEEEEeCCCCCCEEEEEeCCCeEEEEEccCCCCcc---ccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCCC
Confidence 36999999999999433599999999999999998731111 011567789999999999999999866899999999
Q ss_pred cEEEEeCCCCCCCCcccceeee--ecCCccEeeEEEecCCCcEEEEEeCCCeEEEEEcCCCCCCCCeeee-eccCCC-ee
Q 014454 202 QICLWDINAAPKNKSLEAMQIF--KVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSV-VAHQSE-VN 277 (424)
Q Consensus 202 ~i~iwd~~~~~~~~~~~~~~~~--~~~~~~v~~~~~~~~~~~~~~s~~~dg~i~i~d~~~~~~~~~~~~~-~~~~~~-v~ 277 (424)
.|++||++++ ..+..+ ..|...|.+++|+|++. +|++++.||.|++||++++.. +..+ ..|... +.
T Consensus 155 ~i~iwd~~~~------~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~i~iwd~~~~~~---~~~~~~~~~~~~~~ 224 (402)
T 2aq5_A 155 VILVWDVGTG------AAVLTLGPDVHPDTIYSVDWSRDGA-LICTSCRDKRVRVIEPRKGTV---VAEKDRPHEGTRPV 224 (402)
T ss_dssp CEEEEETTTT------EEEEEECTTTCCSCEEEEEECTTSS-CEEEEETTSEEEEEETTTTEE---EEEEECSSCSSSCC
T ss_pred EEEEEECCCC------CccEEEecCCCCCceEEEEECCCCC-EEEEEecCCcEEEEeCCCCce---eeeeccCCCCCcce
Confidence 9999999876 344555 67999999999999887 456999999999999998653 5555 577765 89
Q ss_pred EEEecCCCCeEEEEE---eCCCcEEEEECCCCCCcceEec-CCCCCEEEEEEcCCCCcEEEEEECCCeEEEeeCCCCCcc
Q 014454 278 CLAFNPFNEWILATG---STDKTVKLFDLRKISTALHTFD-SHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEE 353 (424)
Q Consensus 278 ~v~~~~~~~~~l~tg---~~dg~i~iwd~~~~~~~~~~~~-~h~~~v~~~~~sp~~~~~l~s~~~dg~i~iwd~~~~~~~ 353 (424)
+++|+|++. +|++| +.|+.|++||+++...++.... .|...+.+++|+|++..++++++.||.|++||+......
T Consensus 225 ~~~~~~~~~-~l~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~g~~dg~i~i~d~~~~~~~ 303 (402)
T 2aq5_A 225 HAVFVSEGK-ILTTGFSRMSERQVALWDTKHLEEPLSLQELDTSSGVLLPFFDPDTNIVYLCGKGDSSIRYFEITSEAPF 303 (402)
T ss_dssp EEEECSTTE-EEEEEECTTCCEEEEEEETTBCSSCSEEEECCCCSSCEEEEEETTTTEEEEEETTCSCEEEEEECSSTTC
T ss_pred EEEEcCCCc-EEEEeccCCCCceEEEEcCccccCCceEEeccCCCceeEEEEcCCCCEEEEEEcCCCeEEEEEecCCCcc
Confidence 999999886 78888 7899999999998655454444 577889999999999755556668999999999875310
Q ss_pred cCCCCcCCCCCeeeEEEcCCCCCcceEEeCCCCCcEEEEEeCCCcEEEEecCCccC
Q 014454 354 QTPEDAEDGPPELLFIHGGHTSKISDFSWNPCEDWVISSVAEDNILQIWQMAENIY 409 (424)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~ 409 (424)
...+..+. |...|.+++|+|++.+ +++ .++.+++|++.++.+
T Consensus 304 ----------~~~l~~~~-~~~~v~~~~~sp~~~~-~~s--~~~~~~~~~l~~~~~ 345 (402)
T 2aq5_A 304 ----------LHYLSMFS-SKESQRGMGYMPKRGL-EVN--KCEIARFYKLHERKC 345 (402)
T ss_dssp ----------EEEEEEEC-CSSCCSEEEECCGGGS-CGG--GTEEEEEEEEETTEE
T ss_pred ----------eEeecccc-cCCcccceEEeccccc-cee--cceeEEEEEcCCCcE
Confidence 12233333 5688999999999984 543 567999999987643
No 73
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=7.3e-33 Score=251.70 Aligned_cols=217 Identities=25% Similarity=0.355 Sum_probs=187.6
Q ss_pred CCcEEEecCCCceeEEEecCCCCceEEEEeCCCcEEEEeCCCCCCCCcccceeeeecCCccEeeEEEecCCCcEEEEEeC
Q 014454 169 SPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGD 248 (424)
Q Consensus 169 ~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~ 248 (424)
....++.+|.+.|++++|+|.+..+|++|+.|++|++|++..... ....++..+.+|...|.+++|+|++. ++++|+.
T Consensus 8 ~l~~~l~gH~~~V~~l~~~~~~~~~l~s~s~D~~v~~W~~~~~~~-~~~~~~~~~~~h~~~v~~~~~s~dg~-~l~s~s~ 85 (319)
T 3frx_A 8 VLRGTLEGHNGWVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQ-KFGVPVRSFKGHSHIVQDCTLTADGA-YALSASW 85 (319)
T ss_dssp EEEEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEEEEEETT-EEEEEEEEEECCSSCEEEEEECTTSS-EEEEEET
T ss_pred EEEEEEccccceEEEEEccCCCccEEEEecCCccEEEecCCCCCc-cccccceEEeCCcccEEEEEECCCCC-EEEEEeC
Confidence 334578899999999999998766899999999999999865322 11134567889999999999999987 5569999
Q ss_pred CCeEEEEEcCCCCCCCCeeeeeccCCCeeEEEecCCCCeEEEEEeCCCcEEEEECCCCCCcceEecCCCCCEEEEEEcCC
Q 014454 249 DQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATGSTDKTVKLFDLRKISTALHTFDSHKEEVFQVGWNPK 328 (424)
Q Consensus 249 dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~~h~~~v~~~~~sp~ 328 (424)
|++|++||+++++. +..+.+|...|.+++|+|++. +|++|+.|++|++||++. ..+..+.+|...|.+++|+|.
T Consensus 86 D~~v~~wd~~~~~~---~~~~~~h~~~v~~~~~~~~~~-~l~s~s~D~~i~vwd~~~--~~~~~~~~h~~~v~~~~~~~~ 159 (319)
T 3frx_A 86 DKTLRLWDVATGET---YQRFVGHKSDVMSVDIDKKAS-MIISGSRDKTIKVWTIKG--QCLATLLGHNDWVSQVRVVPN 159 (319)
T ss_dssp TSEEEEEETTTTEE---EEEEECCSSCEEEEEECTTSC-EEEEEETTSCEEEEETTS--CEEEEECCCSSCEEEEEECCC
T ss_pred CCEEEEEECCCCCe---eEEEccCCCcEEEEEEcCCCC-EEEEEeCCCeEEEEECCC--CeEEEEeccCCcEEEEEEccC
Confidence 99999999998764 778889999999999999988 699999999999999974 678888999999999999995
Q ss_pred CC-----cEEEEEECCCeEEEeeCCCCCcccCCCCcCCCCCeeeEEEcCCCCCcceEEeCCCCCcEEEEEeCCCcEEEEe
Q 014454 329 NE-----TILASCCLGRRLMVWDLSRIDEEQTPEDAEDGPPELLFIHGGHTSKISDFSWNPCEDWVISSVAEDNILQIWQ 403 (424)
Q Consensus 329 ~~-----~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~vw~ 403 (424)
.. .+|++++.|+.|++||++.. .....+.+|...|++++|+|+++ +|++++.||.|++||
T Consensus 160 ~~~~~~~~~l~s~~~d~~i~~wd~~~~--------------~~~~~~~~h~~~v~~~~~sp~g~-~l~s~~~dg~i~iwd 224 (319)
T 3frx_A 160 EKADDDSVTIISAGNDKMVKAWNLNQF--------------QIEADFIGHNSNINTLTASPDGT-LIASAGKDGEIMLWN 224 (319)
T ss_dssp ------CCEEEEEETTSCEEEEETTTT--------------EEEEEECCCCSCEEEEEECTTSS-EEEEEETTCEEEEEE
T ss_pred CCCCCCccEEEEEeCCCEEEEEECCcc--------------hhheeecCCCCcEEEEEEcCCCC-EEEEEeCCCeEEEEE
Confidence 42 37999999999999999864 55677889999999999999999 799999999999999
Q ss_pred cCCcc
Q 014454 404 MAENI 408 (424)
Q Consensus 404 ~~~~~ 408 (424)
+.++.
T Consensus 225 ~~~~~ 229 (319)
T 3frx_A 225 LAAKK 229 (319)
T ss_dssp TTTTE
T ss_pred CCCCc
Confidence 98764
No 74
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=100.00 E-value=1.3e-32 Score=247.46 Aligned_cols=219 Identities=18% Similarity=0.335 Sum_probs=181.4
Q ss_pred EEEecCCCceeEEEecCCCCceEEEEeCCCcEEEEeCCCCCCCCcccceeeeecCCccEeeEEEecC-CCcEEEEEeCCC
Q 014454 172 LRLRGHSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLR-HEYLFGSVGDDQ 250 (424)
Q Consensus 172 ~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~~~~s~~~dg 250 (424)
..+.+|...|.+++|+|++. +|++|+.|++|++||+.... ...+..+.+|.+.|++++|++. ...+|++|+.|+
T Consensus 3 ~~~~~h~~~V~~~~~s~~g~-~las~s~D~~v~iw~~~~~~----~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~ 77 (297)
T 2pm7_B 3 VIANAHNEMIHDAVMDYYGK-RMATCSSDKTIKIFEVEGET----HKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDG 77 (297)
T ss_dssp EECCSCSSCEEEEEECTTSS-EEEEEETTSCEEEEEBCSSC----BCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTT
T ss_pred eeccCCcCceEEEEECCCCC-EEEEEeCCCEEEEEecCCCC----cEEEEEEccccCCeEEEEecCCCcCCEEEEEcCCC
Confidence 45678999999999999988 79999999999999997432 1345677899999999999864 235778999999
Q ss_pred eEEEEEcCCCCCCCCeeeeeccCCCeeEEEecCC--CCeEEEEEeCCCcEEEEECCCCCC-cceEecCCCCCEEEEEEcC
Q 014454 251 YLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPF--NEWILATGSTDKTVKLFDLRKIST-ALHTFDSHKEEVFQVGWNP 327 (424)
Q Consensus 251 ~i~i~d~~~~~~~~~~~~~~~~~~~v~~v~~~~~--~~~~l~tg~~dg~i~iwd~~~~~~-~~~~~~~h~~~v~~~~~sp 327 (424)
+|++||++++.. ..+..+..|...|++++|+|+ +. +|++|+.|+.|++||++.... ....+.+|...|.+++|+|
T Consensus 78 ~v~iWd~~~~~~-~~~~~~~~h~~~v~~v~~~p~~~g~-~l~s~s~d~~v~~wd~~~~~~~~~~~~~~h~~~v~~~~~~p 155 (297)
T 2pm7_B 78 KVMIWKEENGRW-SQIAVHAVHSASVNSVQWAPHEYGP-MLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAP 155 (297)
T ss_dssp EEEEEEBSSSCB-CCCEEECCCSSCEEEEEECCGGGCS-EEEEEETTSEEEEEEBCSSSCBCCEEEECCSSCEEEEEECC
T ss_pred EEEEEEcCCCce-EEEEEeecCCCceeEEEeCcCCCCc-EEEEEECCCcEEEEEecCCCceeeeeeecccCccceEeecC
Confidence 999999987642 345667789999999999997 55 799999999999999987432 2467788999999999999
Q ss_pred CC------------CcEEEEEECCCeEEEeeCCCCCcccCCCCcCCCCCeeeEEEcCCCCCcceEEeCCCC--CcEEEEE
Q 014454 328 KN------------ETILASCCLGRRLMVWDLSRIDEEQTPEDAEDGPPELLFIHGGHTSKISDFSWNPCE--DWVISSV 393 (424)
Q Consensus 328 ~~------------~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~--~~~l~s~ 393 (424)
++ ..+|++|+.|+.|+|||++..... ..+...+.+|...|.+++|+|++ ..+|+++
T Consensus 156 ~~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~----------~~~~~~l~~H~~~V~~v~~sp~~~~~~~las~ 225 (297)
T 2pm7_B 156 ATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQT----------YVLESTLEGHSDWVRDVAWSPTVLLRSYMASV 225 (297)
T ss_dssp CC------------CCEEEEEETTSCEEEEEEETTTTE----------EEEEEEECCCSSCEEEEEECCCCSSSEEEEEE
T ss_pred CcccccccCCCCCCcceEEEEcCCCcEEEEEEcCCCce----------EEEEEEecCCCCceEEEEECCCCCCceEEEEE
Confidence 73 248999999999999999764311 13566788999999999999985 3379999
Q ss_pred eCCCcEEEEecCCc
Q 014454 394 AEDNILQIWQMAEN 407 (424)
Q Consensus 394 ~~dg~i~vw~~~~~ 407 (424)
+.|++|+||++...
T Consensus 226 s~D~~v~iWd~~~~ 239 (297)
T 2pm7_B 226 SQDRTCIIWTQDNE 239 (297)
T ss_dssp ETTSCEEEEEESST
T ss_pred ECCCcEEEEEeCCC
Confidence 99999999999763
No 75
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.3e-33 Score=268.21 Aligned_cols=272 Identities=14% Similarity=0.211 Sum_probs=201.0
Q ss_pred eccCCceeEEEecC-CCCcEEEEEeCCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCceeEEEecCCCCceEEEEeCC
Q 014454 122 INHDGEVNRARYMP-QNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDD 200 (424)
Q Consensus 122 ~~h~~~v~~~~~~p-~~~~~latg~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~d 200 (424)
..|.+.|++++|+| ++. +||+|+.||.|+|||+...... ........+ +|...|.+++|+|++. +|++|+.|
T Consensus 60 ~~h~~~V~~~~~s~~~~~-~l~s~s~dg~v~vwd~~~~~~~----~~~~~~~~~-~h~~~v~~~~~~~~~~-~l~s~s~d 132 (437)
T 3gre_A 60 ENEPNSITSSAVSPGETP-YLITGSDQGVIKIWNLKEIIVG----EVYSSSLTY-DCSSTVTQITMIPNFD-AFAVSSKD 132 (437)
T ss_dssp TTTTSCEEEEEEECSSSC-EEEEEETTSEEEEEEHHHHHTT----CCCSCSEEE-ECSSCEEEEEECTTSS-EEEEEETT
T ss_pred cCCCCceEEEEECCCCCC-EEEEecCCceEEEeECcccccC----cccceeeec-cCCCCEEEEEEeCCCC-EEEEEeCC
Confidence 46899999999999 776 8999999999999998651110 011223333 5999999999999877 79999999
Q ss_pred CcEEEEeCC---CCCCCCcc--cceeeee--c--CCccEeeEE--EecCCCcEEEEEeCCCeEEEEEcCCCCCCCCeeee
Q 014454 201 AQICLWDIN---AAPKNKSL--EAMQIFK--V--HEGVVEDVA--WHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSV 269 (424)
Q Consensus 201 g~i~iwd~~---~~~~~~~~--~~~~~~~--~--~~~~v~~~~--~~~~~~~~~~s~~~dg~i~i~d~~~~~~~~~~~~~ 269 (424)
|.|++||+. .+...... ..+..+. . +...+.++. +++++. ++++++.||.|++||+++++. +..+
T Consensus 133 g~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~~~d~~i~iwd~~~~~~---~~~~ 208 (437)
T 3gre_A 133 GQIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKS-LLVALTNLSRVIIFDIRTLER---LQII 208 (437)
T ss_dssp SEEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCE-EEEEEETTSEEEEEETTTCCE---EEEE
T ss_pred CEEEEEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCCC-EEEEEeCCCeEEEEeCCCCee---eEEE
Confidence 999999995 32211100 0111111 1 445566666 445654 677999999999999998664 6667
Q ss_pred ec--cCCCeeEEEecCCCCeEEEEEeCCCcEEEEECCCCCCcceEec-CCCCCEEEEEEcC----CCCcEEEEEECCCeE
Q 014454 270 VA--HQSEVNCLAFNPFNEWILATGSTDKTVKLFDLRKISTALHTFD-SHKEEVFQVGWNP----KNETILASCCLGRRL 342 (424)
Q Consensus 270 ~~--~~~~v~~v~~~~~~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~-~h~~~v~~~~~sp----~~~~~l~s~~~dg~i 342 (424)
.. |...|++++|+|++. +|++|+.||.|++||++. +.++..+. .|..+|.+++|+| ++ .+|++++.||.|
T Consensus 209 ~~~~h~~~v~~~~~s~~~~-~l~s~~~dg~i~iwd~~~-~~~~~~~~~~~~~~v~~~~~~~~~s~~~-~~l~s~~~dg~i 285 (437)
T 3gre_A 209 ENSPRHGAVSSICIDEECC-VLILGTTRGIIDIWDIRF-NVLIRSWSFGDHAPITHVEVCQFYGKNS-VIVVGGSSKTFL 285 (437)
T ss_dssp ECCGGGCCEEEEEECTTSC-EEEEEETTSCEEEEETTT-TEEEEEEBCTTCEEEEEEEECTTTCTTE-EEEEEESTTEEE
T ss_pred ccCCCCCceEEEEECCCCC-EEEEEcCCCeEEEEEcCC-ccEEEEEecCCCCceEEEEeccccCCCc-cEEEEEcCCCcE
Confidence 66 889999999999987 699999999999999998 77788775 7788999997776 34 489999999999
Q ss_pred EEeeCCCCCcccCCCCcCCCCCeeeE----------EEcC--CCCCcceEEeCCCCCcEEEEEeCCCcEEEEecCCccC
Q 014454 343 MVWDLSRIDEEQTPEDAEDGPPELLF----------IHGG--HTSKISDFSWNPCEDWVISSVAEDNILQIWQMAENIY 409 (424)
Q Consensus 343 ~iwd~~~~~~~~~~~~~~~~~~~~~~----------~~~~--h~~~v~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~ 409 (424)
+|||++.+............+....+ .+.+ |...|++++|+ +++ +|++++.|+.|++||+.++..
T Consensus 286 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~-~~~-~l~s~~~d~~i~~wd~~~~~~ 362 (437)
T 3gre_A 286 TIWNFVKGHCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTISVS-NDK-ILLTDEATSSIVMFSLNELSS 362 (437)
T ss_dssp EEEETTTTEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEE-TTE-EEEEEGGGTEEEEEETTCGGG
T ss_pred EEEEcCCCcEEEEEEcCCCCCccceecccccccccceecccccCCceEEEEEC-Cce-EEEecCCCCeEEEEECCCccc
Confidence 99999876533222111111110000 1223 77789999999 666 799999999999999988753
No 76
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.6e-32 Score=245.90 Aligned_cols=244 Identities=20% Similarity=0.222 Sum_probs=206.4
Q ss_pred EEeccCCceeEEEecCCCCcEEEEEeCCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCceeEEEecCCCCceEEEEeC
Q 014454 120 QQINHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSD 199 (424)
Q Consensus 120 ~~~~h~~~v~~~~~~p~~~~~latg~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~ 199 (424)
...+|.+.|++++| |++. +||+|+.||.|++||+.. ......+..|...|.+++|+|++. +|++|+.
T Consensus 13 ~l~~h~~~v~~~~~-~~~~-~l~s~~~dg~v~vw~~~~----------~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~ 79 (313)
T 3odt_A 13 TLKGHDQDVRDVVA-VDDS-KVASVSRDGTVRLWSKDD----------QWLGTVVYTGQGFLNSVCYDSEKE-LLLFGGK 79 (313)
T ss_dssp EECCCSSCEEEEEE-EETT-EEEEEETTSEEEEEEESS----------SEEEEEEEECSSCEEEEEEETTTT-EEEEEET
T ss_pred HhhCCCCCcEEEEe-cCCC-EEEEEEcCCcEEEEECCC----------CEEEEEeecCCccEEEEEECCCCC-EEEEecC
Confidence 34579999999999 8776 799999999999999976 445667888999999999999887 8999999
Q ss_pred CCcEEEEeCCCCCCCCcccceeeeecCCccEeeEEEecCCCcEEEEEeCCCeEEEEEcCCCCCCCCeeeeeccCCCeeEE
Q 014454 200 DAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCL 279 (424)
Q Consensus 200 dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~v 279 (424)
||.|++|++...... .....+..|...|.+++|+ + .++++++.||.|++|| . ...+..+..|...+.++
T Consensus 80 dg~i~~~~~~~~~~~---~~~~~~~~~~~~i~~~~~~--~-~~l~~~~~d~~i~~~d--~---~~~~~~~~~~~~~v~~~ 148 (313)
T 3odt_A 80 DTMINGVPLFATSGE---DPLYTLIGHQGNVCSLSFQ--D-GVVISGSWDKTAKVWK--E---GSLVYNLQAHNASVWDA 148 (313)
T ss_dssp TSCEEEEETTCCTTS---CC-CEECCCSSCEEEEEEE--T-TEEEEEETTSEEEEEE--T---TEEEEEEECCSSCEEEE
T ss_pred CCeEEEEEeeecCCC---CcccchhhcccCEEEEEec--C-CEEEEEeCCCCEEEEc--C---CcEEEecccCCCceeEE
Confidence 999999999875432 3345567899999999994 3 3677999999999999 2 22466778899999999
Q ss_pred EecC-CCCeEEEEEeCCCcEEEEECCCCCCcceEecC-CCCCEEEEEEcCCCCcEEEEEECCCeEEEeeCCCCCcccCCC
Q 014454 280 AFNP-FNEWILATGSTDKTVKLFDLRKISTALHTFDS-HKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPE 357 (424)
Q Consensus 280 ~~~~-~~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~~-h~~~v~~~~~sp~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~ 357 (424)
+|.| ++. ++++++.||.|++||. ......+.. |...|.+++|+|++. +++++.||.|++||++..
T Consensus 149 ~~~~~~~~-~l~~~~~d~~i~i~d~---~~~~~~~~~~~~~~i~~~~~~~~~~--~~~~~~dg~i~i~d~~~~------- 215 (313)
T 3odt_A 149 KVVSFSEN-KFLTASADKTIKLWQN---DKVIKTFSGIHNDVVRHLAVVDDGH--FISCSNDGLIKLVDMHTG------- 215 (313)
T ss_dssp EEEETTTT-EEEEEETTSCEEEEET---TEEEEEECSSCSSCEEEEEEEETTE--EEEEETTSEEEEEETTTC-------
T ss_pred EEccCCCC-EEEEEECCCCEEEEec---CceEEEEeccCcccEEEEEEcCCCe--EEEccCCCeEEEEECCch-------
Confidence 9998 555 7999999999999993 356667776 899999999999984 889999999999999874
Q ss_pred CcCCCCCeeeEEEcCCCCCcceEEeCCCCCcEEEEEeCCCcEEEEecCCccC
Q 014454 358 DAEDGPPELLFIHGGHTSKISDFSWNPCEDWVISSVAEDNILQIWQMAENIY 409 (424)
Q Consensus 358 ~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~ 409 (424)
..+..+.+|...|++++|+|++. |++++.||.|++||+.++..
T Consensus 216 -------~~~~~~~~~~~~i~~~~~~~~~~--l~~~~~dg~v~iwd~~~~~~ 258 (313)
T 3odt_A 216 -------DVLRTYEGHESFVYCIKLLPNGD--IVSCGEDRTVRIWSKENGSL 258 (313)
T ss_dssp -------CEEEEEECCSSCEEEEEECTTSC--EEEEETTSEEEEECTTTCCE
T ss_pred -------hhhhhhhcCCceEEEEEEecCCC--EEEEecCCEEEEEECCCCce
Confidence 55777889999999999999994 77889999999999988743
No 77
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=100.00 E-value=1.2e-31 Score=245.71 Aligned_cols=279 Identities=12% Similarity=0.120 Sum_probs=223.5
Q ss_pred CccEEEEccCCCCCCCCCCceEEEEEeecCCCCCCCeEEEEEEECCCCCCCcccCCCCCcCCCCCCCCCCCCcEEEEEEe
Q 014454 43 PSLTVEWLPDREEPPGKDYSVQKMILGTHTSENEPNYLMLAQVQLPLDDSENDARHYDDDRSDFGGFGCANGKVQIIQQI 122 (424)
Q Consensus 43 p~~~~~~~p~~~~~~~~~~~~~~~~~gt~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 122 (424)
+..++.|.|+. ..++.|+ .+..++++.+.-. ..........
T Consensus 13 ~v~~~~~s~~~----------~~l~~~~-----~d~~v~iw~~~~~------------------------~~~~~~~~~~ 53 (342)
T 1yfq_A 13 YISDIKIIPSK----------SLLLITS-----WDGSLTVYKFDIQ------------------------AKNVDLLQSL 53 (342)
T ss_dssp CEEEEEEEGGG----------TEEEEEE-----TTSEEEEEEEETT------------------------TTEEEEEEEE
T ss_pred cEEEEEEcCCC----------CEEEEEc-----CCCeEEEEEeCCC------------------------Cccccceeee
Confidence 46688999864 3566655 4467888887421 1123344556
Q ss_pred ccCCceeEEEecCCCCcEEEEEeCCCeEEEEeC-CCCCCCCCCCCCCCCcEEEec--CCCceeEEEecCCCCceEEEEeC
Q 014454 123 NHDGEVNRARYMPQNPFLIATKTVSAEVYVFDY-SKHPSKPPLDGACSPDLRLRG--HSTEGYGLSWSKFKEGHLLSGSD 199 (424)
Q Consensus 123 ~h~~~v~~~~~~p~~~~~latg~~dg~v~iw~~-~~~~~~~~~~~~~~~~~~~~~--h~~~v~~l~~~~~~~~~l~s~~~ 199 (424)
.|...|++++|+|++..+|++|+.||.|++|++ .. .....+.+ |...|.+++|+| +. +|++++.
T Consensus 54 ~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~wd~~~~-----------~~~~~~~~~~~~~~v~~l~~~~-~~-~l~s~~~ 120 (342)
T 1yfq_A 54 RYKHPLLCCNFIDNTDLQIYVGTVQGEILKVDLIGS-----------PSFQALTNNEANLGICRICKYG-DD-KLIAASW 120 (342)
T ss_dssp ECSSCEEEEEEEESSSEEEEEEETTSCEEEECSSSS-----------SSEEECBSCCCCSCEEEEEEET-TT-EEEEEET
T ss_pred ecCCceEEEEECCCCCcEEEEEcCCCeEEEEEeccC-----------CceEeccccCCCCceEEEEeCC-CC-EEEEEcC
Confidence 899999999999986427889999999999999 76 22367778 999999999999 65 8999999
Q ss_pred CCcEEEEeCCC---------CCCCCcccceeeeecCCccEeeEEEecCCCcEEEEEeCCCeEEEEEcCC-CCCCCCeeee
Q 014454 200 DAQICLWDINA---------APKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRT-PSVSKPVQSV 269 (424)
Q Consensus 200 dg~i~iwd~~~---------~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~dg~i~i~d~~~-~~~~~~~~~~ 269 (424)
||.|++||+++ ... +..+. |...|.+++|+|++ +++++.|+.|++||++. ... ......
T Consensus 121 d~~i~iwd~~~~~~~~~~~~~~~------~~~~~-~~~~v~~~~~~~~~---l~~~~~d~~i~i~d~~~~~~~-~~~~~~ 189 (342)
T 1yfq_A 121 DGLIEVIDPRNYGDGVIAVKNLN------SNNTK-VKNKIFTMDTNSSR---LIVGMNNSQVQWFRLPLCEDD-NGTIEE 189 (342)
T ss_dssp TSEEEEECHHHHTTBCEEEEESC------SSSSS-SCCCEEEEEECSSE---EEEEESTTEEEEEESSCCTTC-CCEEEE
T ss_pred CCeEEEEcccccccccccccCCe------eeEEe-eCCceEEEEecCCc---EEEEeCCCeEEEEECCccccc-cceeee
Confidence 99999999975 322 22333 78899999999876 66899999999999998 542 223344
Q ss_pred eccCCCeeEEEecC-CCCeEEEEEeCCCcEEEEECCCC-----CCcceEecCCCC---------CEEEEEEcCCCCcEEE
Q 014454 270 VAHQSEVNCLAFNP-FNEWILATGSTDKTVKLFDLRKI-----STALHTFDSHKE---------EVFQVGWNPKNETILA 334 (424)
Q Consensus 270 ~~~~~~v~~v~~~~-~~~~~l~tg~~dg~i~iwd~~~~-----~~~~~~~~~h~~---------~v~~~~~sp~~~~~l~ 334 (424)
..|...+.+++|+| ++. +|++|+.||.|++||++.. ..+...+..|.. .|.+++|+|++. +|+
T Consensus 190 ~~~~~~i~~i~~~~~~~~-~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~-~l~ 267 (342)
T 1yfq_A 190 SGLKYQIRDVALLPKEQE-GYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHK-FLY 267 (342)
T ss_dssp CSCSSCEEEEEECSGGGC-EEEEEETTSEEEEEECCTTCCSTTCTTCEEEECCCCCTTCCSSCCCEEEEEECTTTC-CEE
T ss_pred cCCCCceeEEEECCCCCC-EEEEEecCCcEEEEEEcCCCcccccccceeeecccccccccccceeEEEEEEcCCCC-EEE
Confidence 56888999999999 887 6999999999999999885 377888888865 999999999996 689
Q ss_pred EEECCCeEEEeeCCCCCcccCCCCcCCCCCeeeEEEcCC-CCCcceEEeCCCCCcEEEEEeCCCc-EEEEe
Q 014454 335 SCCLGRRLMVWDLSRIDEEQTPEDAEDGPPELLFIHGGH-TSKISDFSWNPCEDWVISSVAEDNI-LQIWQ 403 (424)
Q Consensus 335 s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h-~~~v~~~~~~~~~~~~l~s~~~dg~-i~vw~ 403 (424)
+++.||.|++||+.++ .++..+.+| ...|.+++ |+++ +|++++.||. .+.|.
T Consensus 268 ~~~~dg~i~vwd~~~~--------------~~~~~~~~~h~~~v~~~~--~~~~-~l~s~s~Dg~~~~~~~ 321 (342)
T 1yfq_A 268 TAGSDGIISCWNLQTR--------------KKIKNFAKFNEDSVVKIA--CSDN-ILCLATSDDTFKTNAA 321 (342)
T ss_dssp EEETTSCEEEEETTTT--------------EEEEECCCCSSSEEEEEE--ECSS-EEEEEEECTHHHHCSS
T ss_pred EecCCceEEEEcCccH--------------hHhhhhhcccCCCceEec--CCCC-eEEEEecCCccccccc
Confidence 9999999999999875 567778888 99999999 9998 7999999998 44333
No 78
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=100.00 E-value=6.5e-32 Score=258.42 Aligned_cols=248 Identities=20% Similarity=0.328 Sum_probs=208.6
Q ss_pred EEEEeccCCce-eEEEecCCCCcEEEEEeCCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCceeEEEecCCCCceEEE
Q 014454 118 IIQQINHDGEV-NRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLS 196 (424)
Q Consensus 118 ~~~~~~h~~~v-~~~~~~p~~~~~latg~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s 196 (424)
.....+|.+.| .++.+. + .+|++|+.||.|++||+.+ ......+.+|...|.+++|+|++ +|++
T Consensus 114 ~~~l~~h~~~v~~~~~~~--~-~~l~sgs~dg~i~vwd~~~----------~~~~~~~~~h~~~V~~l~~~~~~--~l~s 178 (464)
T 3v7d_B 114 RTTLRGHMTSVITCLQFE--D-NYVITGADDKMIRVYDSIN----------KKFLLQLSGHDGGVWALKYAHGG--ILVS 178 (464)
T ss_dssp EEEEECCSSSCEEEEEEE--T-TEEEEEETTSCEEEEETTT----------TEEEEEECCCSSCEEEEEECSTT--EEEE
T ss_pred eEEEcCCCCCcEEEEEEC--C-CEEEEEcCCCcEEEEECCC----------CcEEEEEeCCCcCEEEEEEcCCC--EEEE
Confidence 34455788774 677774 3 3899999999999999987 45677888999999999999866 7999
Q ss_pred EeCCCcEEEEeCCCCCCCCcccceeeeecCCccEeeEEEecC-CCcEEEEEeCCCeEEEEEcCCCCCCCC----------
Q 014454 197 GSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLR-HEYLFGSVGDDQYLLIWDLRTPSVSKP---------- 265 (424)
Q Consensus 197 ~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~~~~s~~~dg~i~i~d~~~~~~~~~---------- 265 (424)
|+.||+|++||++++ ..+..+.+|...|.+++|++. +..++++++.||.|++||+++......
T Consensus 179 ~s~dg~i~vwd~~~~------~~~~~~~~h~~~v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~ 252 (464)
T 3v7d_B 179 GSTDRTVRVWDIKKG------CCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLV 252 (464)
T ss_dssp EETTSCEEEEETTTT------EEEEEECCCSSCEEEEEEEESSSCEEEEEEETTSCEEEEECCCCCCC------CCSSEE
T ss_pred EeCCCCEEEEECCCC------cEEEEECCCCCccEEEEEecCCCCCEEEEEcCCCcEEEeeCCCCcccccccccCCcceE
Confidence 999999999999876 346667889999999999962 335778999999999999997653211
Q ss_pred ----------eeeeeccCCCeeEEEecCCCCeEEEEEeCCCcEEEEECCCCCCcceEecCCCCCEEEEEEcCCCCcEEEE
Q 014454 266 ----------VQSVVAHQSEVNCLAFNPFNEWILATGSTDKTVKLFDLRKISTALHTFDSHKEEVFQVGWNPKNETILAS 335 (424)
Q Consensus 266 ----------~~~~~~~~~~v~~v~~~~~~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~l~s 335 (424)
+..+.+|...+.++. +++. ++++|+.||.|++||+++ .+++..+.+|...|.+++|+|++. +|++
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~v~~~~--~~~~-~l~~~~~d~~i~vwd~~~-~~~~~~~~~~~~~v~~~~~~~~~~-~l~s 327 (464)
T 3v7d_B 253 FHTPEENPYFVGVLRGHMASVRTVS--GHGN-IVVSGSYDNTLIVWDVAQ-MKCLYILSGHTDRIYSTIYDHERK-RCIS 327 (464)
T ss_dssp ESCGGGCTTEEEEECCCSSCEEEEE--EETT-EEEEEETTSCEEEEETTT-TEEEEEECCCSSCEEEEEEETTTT-EEEE
T ss_pred eeccCCCeEEEEEccCccceEEEEc--CCCC-EEEEEeCCCeEEEEECCC-CcEEEEecCCCCCEEEEEEcCCCC-EEEE
Confidence 445667888888885 4465 699999999999999998 788899999999999999999986 7999
Q ss_pred EECCCeEEEeeCCCCCcccCCCCcCCCCCeeeEEEcCCCCCcceEEeCCCCCcEEEEEeCCCcEEEEecCCcc
Q 014454 336 CCLGRRLMVWDLSRIDEEQTPEDAEDGPPELLFIHGGHTSKISDFSWNPCEDWVISSVAEDNILQIWQMAENI 408 (424)
Q Consensus 336 ~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~ 408 (424)
|+.||.|++||++++ .++..+.+|...|..++|++ . .|++++.||.|++||+.+..
T Consensus 328 g~~dg~i~vwd~~~~--------------~~~~~~~~h~~~v~~~~~~~--~-~l~s~s~dg~v~vwd~~~~~ 383 (464)
T 3v7d_B 328 ASMDTTIRIWDLENG--------------ELMYTLQGHTALVGLLRLSD--K-FLVSAAADGSIRGWDANDYS 383 (464)
T ss_dssp EETTSCEEEEETTTT--------------EEEEEECCCSSCEEEEEECS--S-EEEEEETTSEEEEEETTTCC
T ss_pred EeCCCcEEEEECCCC--------------cEEEEEeCCCCcEEEEEEcC--C-EEEEEeCCCcEEEEECCCCc
Confidence 999999999999874 66788899999999999984 4 79999999999999998753
No 79
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=100.00 E-value=1.7e-32 Score=251.40 Aligned_cols=252 Identities=12% Similarity=0.141 Sum_probs=202.2
Q ss_pred ccCCceeEEEecCCCCcEEEEEeCCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCceeEEEecCCCCceEEEEeCCCc
Q 014454 123 NHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDDAQ 202 (424)
Q Consensus 123 ~h~~~v~~~~~~p~~~~~latg~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~ 202 (424)
.|.+.|++++|+|++. +|++|+.||.|+||++.... .......+.+|...|.+++|+|++..+|++|+.||.
T Consensus 9 ~h~~~v~~~~~s~~~~-~l~~~~~d~~v~iw~~~~~~-------~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~ 80 (342)
T 1yfq_A 9 APKDYISDIKIIPSKS-LLLITSWDGSLTVYKFDIQA-------KNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGE 80 (342)
T ss_dssp CCSSCEEEEEEEGGGT-EEEEEETTSEEEEEEEETTT-------TEEEEEEEEECSSCEEEEEEEESSSEEEEEEETTSC
T ss_pred CCCCcEEEEEEcCCCC-EEEEEcCCCeEEEEEeCCCC-------ccccceeeeecCCceEEEEECCCCCcEEEEEcCCCe
Confidence 6999999999999886 88999999999999998621 011245566899999999999976515999999999
Q ss_pred EEEEeC-CCCCCCCcccceeeeec--CCccEeeEEEecCCCcEEEEEeCCCeEEEEEcCC---------CCCCCCeeeee
Q 014454 203 ICLWDI-NAAPKNKSLEAMQIFKV--HEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRT---------PSVSKPVQSVV 270 (424)
Q Consensus 203 i~iwd~-~~~~~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~~~~s~~~dg~i~i~d~~~---------~~~~~~~~~~~ 270 (424)
|++||+ ..+. ...+.. |...|.+++|+| +. ++++++.|+.|++||+++ ... +..+.
T Consensus 81 i~~wd~~~~~~-------~~~~~~~~~~~~v~~l~~~~-~~-~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~---~~~~~ 148 (342)
T 1yfq_A 81 ILKVDLIGSPS-------FQALTNNEANLGICRICKYG-DD-KLIAASWDGLIEVIDPRNYGDGVIAVKNLN---SNNTK 148 (342)
T ss_dssp EEEECSSSSSS-------EEECBSCCCCSCEEEEEEET-TT-EEEEEETTSEEEEECHHHHTTBCEEEEESC---SSSSS
T ss_pred EEEEEeccCCc-------eEeccccCCCCceEEEEeCC-CC-EEEEEcCCCeEEEEcccccccccccccCCe---eeEEe
Confidence 999999 7652 255667 999999999999 54 667999999999999987 543 33333
Q ss_pred ccCCCeeEEEecCCCCeEEEEEeCCCcEEEEECCC-CCCc-ceEecCCCCCEEEEEEcC-CCCcEEEEEECCCeEEEeeC
Q 014454 271 AHQSEVNCLAFNPFNEWILATGSTDKTVKLFDLRK-ISTA-LHTFDSHKEEVFQVGWNP-KNETILASCCLGRRLMVWDL 347 (424)
Q Consensus 271 ~~~~~v~~v~~~~~~~~~l~tg~~dg~i~iwd~~~-~~~~-~~~~~~h~~~v~~~~~sp-~~~~~l~s~~~dg~i~iwd~ 347 (424)
|...|.+++|+|++ +++++.|+.|++||++. .... ......|...|.+++|+| ++. +|++++.||.|++|++
T Consensus 149 -~~~~v~~~~~~~~~---l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~-~l~~~~~dg~i~i~~~ 223 (342)
T 1yfq_A 149 -VKNKIFTMDTNSSR---LIVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQE-GYACSSIDGRVAVEFF 223 (342)
T ss_dssp -SCCCEEEEEECSSE---EEEEESTTEEEEEESSCCTTCCCEEEECSCSSCEEEEEECSGGGC-EEEEEETTSEEEEEEC
T ss_pred -eCCceEEEEecCCc---EEEEeCCCeEEEEECCccccccceeeecCCCCceeEEEECCCCCC-EEEEEecCCcEEEEEE
Confidence 88999999999865 88999999999999997 4433 334556888999999999 885 7999999999999999
Q ss_pred CCCCcccCCCCcCCCCCeeeEEEcCCCC---------CcceEEeCCCCCcEEEEEeCCCcEEEEecCCcc
Q 014454 348 SRIDEEQTPEDAEDGPPELLFIHGGHTS---------KISDFSWNPCEDWVISSVAEDNILQIWQMAENI 408 (424)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~~~~~~~h~~---------~v~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~ 408 (424)
+...... .......+.+|.. .|.+++|+|+++ +|++++.||.|++||+.++.
T Consensus 224 ~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~-~l~~~~~dg~i~vwd~~~~~ 284 (342)
T 1yfq_A 224 DDQGDDY--------NSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHK-FLYTAGSDGIISCWNLQTRK 284 (342)
T ss_dssp CTTCCST--------TCTTCEEEECCCCCTTCCSSCCCEEEEEECTTTC-CEEEEETTSCEEEEETTTTE
T ss_pred cCCCccc--------ccccceeeecccccccccccceeEEEEEEcCCCC-EEEEecCCceEEEEcCccHh
Confidence 7641000 0133445555544 899999999999 58899999999999998764
No 80
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=100.00 E-value=9.5e-32 Score=255.82 Aligned_cols=319 Identities=17% Similarity=0.260 Sum_probs=220.2
Q ss_pred CccEEEEccCCCCCCCCCCceEEEEEeecCCCCCCCeEEEEEEECCCCCCCcccCCCCCcCCCCCCCCCCCCcEEEE-EE
Q 014454 43 PSLTVEWLPDREEPPGKDYSVQKMILGTHTSENEPNYLMLAQVQLPLDDSENDARHYDDDRSDFGGFGCANGKVQII-QQ 121 (424)
Q Consensus 43 p~~~~~~~p~~~~~~~~~~~~~~~~~gt~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 121 (424)
+..+++|.|+. ..++.|+ .+..|+++.+.-..... ....+.+++. ..
T Consensus 30 ~V~~v~~s~~g----------~~la~g~-----~dg~v~iw~~~~~~~~~-----------------~~~~~~~~~~~~~ 77 (447)
T 3dw8_B 30 IISTVEFNHSG----------ELLATGD-----KGGRVVIFQQEQENKIQ-----------------SHSRGEYNVYSTF 77 (447)
T ss_dssp SEEEEEECSSS----------SEEEEEE-----TTSEEEEEEECC----------------------CCCCCCEEEEEEE
T ss_pred cEEEEEECCCC----------CEEEEEc-----CCCeEEEEEecCCCCCC-----------------cccccceeEeccc
Confidence 45688999865 4566665 45678888874221000 0011223333 23
Q ss_pred eccC------------CceeEEEecCCCC-cEEEEEeCCCeEEEEeCCCCCCCC------C---------CCCCC-C---
Q 014454 122 INHD------------GEVNRARYMPQNP-FLIATKTVSAEVYVFDYSKHPSKP------P---------LDGAC-S--- 169 (424)
Q Consensus 122 ~~h~------------~~v~~~~~~p~~~-~~latg~~dg~v~iw~~~~~~~~~------~---------~~~~~-~--- 169 (424)
.+|. +.|++++|+|++. .+|++++.||.|++|++....... . ..... .
T Consensus 78 ~~h~~~~~~~~~~~~~~~V~~l~~~~~~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 157 (447)
T 3dw8_B 78 QSHEPEFDYLKSLEIEEKINKIRWLPQKNAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVF 157 (447)
T ss_dssp ECCCCEEEGGGTEEECCCCCEEEECCCCSSSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEE
T ss_pred ccccccccccccccccCceEEEEEcCCCCcceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccc
Confidence 3687 8899999999863 378899999999999986511100 0 00000 0
Q ss_pred ----------CcEE-EecCCCceeEEEecCCCCceEEEEeCCCcEEEEeCCCCCCCCccccee-------eeecCCccEe
Q 014454 170 ----------PDLR-LRGHSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQ-------IFKVHEGVVE 231 (424)
Q Consensus 170 ----------~~~~-~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~-------~~~~~~~~v~ 231 (424)
+... ..+|...|.+++|+|++. +|++| .||.|++||++.... ... .+..|...|.
T Consensus 158 ~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~-~l~s~-~d~~i~iwd~~~~~~-----~~~~~~~~~~~~~~~~~~v~ 230 (447)
T 3dw8_B 158 RPMDLMVEASPRRIFANAHTYHINSISINSDYE-TYLSA-DDLRINLWHLEITDR-----SFNIVDIKPANMEELTEVIT 230 (447)
T ss_dssp EEEEEEEEEEEEEEECSCCSSCCCEEEECTTSS-EEEEE-CSSEEEEEETTEEEE-----EEEEEECCCSSGGGCCCCEE
T ss_pred cchheeeeccceEEeccCCCcceEEEEEcCCCC-EEEEe-CCCeEEEEECCCCCc-----eeeeeecccccccccCcceE
Confidence 0112 357999999999999887 78888 799999999974311 111 3557999999
Q ss_pred eEEEecCCCcEEEEEeCCCeEEEEEcCCCCC-CCCeeeeeccCC------------CeeEEEecCCCCeEEEEEeCCCcE
Q 014454 232 DVAWHLRHEYLFGSVGDDQYLLIWDLRTPSV-SKPVQSVVAHQS------------EVNCLAFNPFNEWILATGSTDKTV 298 (424)
Q Consensus 232 ~~~~~~~~~~~~~s~~~dg~i~i~d~~~~~~-~~~~~~~~~~~~------------~v~~v~~~~~~~~~l~tg~~dg~i 298 (424)
+++|+|++..+|++|+.||.|++||++++.. ...+..+..|.. .|.+++|+|++. +|++++. +.|
T Consensus 231 ~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~-~l~~~~~-~~v 308 (447)
T 3dw8_B 231 AAEFHPNSCNTFVYSSSKGTIRLCDMRASALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGR-YMMTRDY-LSV 308 (447)
T ss_dssp EEEECSSCTTEEEEEETTSCEEEEETTTCSSSCTTCEEECCC-----CCHHHHHTTCEEEEEECTTSS-EEEEEES-SEE
T ss_pred EEEECCCCCcEEEEEeCCCeEEEEECcCCccccceeeEeccCCCccccccccccCceEEEEEECCCCC-EEEEeeC-CeE
Confidence 9999999856788999999999999998763 223566667765 899999999988 6888888 999
Q ss_pred EEEECCCCCCcceEecCCCCC---------------EEEEEEcCCCCcEEEEEECCCeEEEeeCCCCCcccCCCCcC---
Q 014454 299 KLFDLRKISTALHTFDSHKEE---------------VFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPEDAE--- 360 (424)
Q Consensus 299 ~iwd~~~~~~~~~~~~~h~~~---------------v~~~~~sp~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~--- 360 (424)
++||++..+.++..+..|... +..++|+|++. +|++++.||.|+|||+..+..........
T Consensus 309 ~iwd~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~s~~~~-~l~s~s~dg~v~iwd~~~~~~~~~~~~~~~~~ 387 (447)
T 3dw8_B 309 KVWDLNMENRPVETYQVHEYLRSKLCSLYENDCIFDKFECCWNGSDS-VVMTGSYNNFFRMFDRNTKRDITLEASRENNK 387 (447)
T ss_dssp EEEETTCCSSCSCCEESCGGGTTTHHHHHHTSGGGCCCCEEECTTSS-EEEEECSTTEEEEEETTTCCEEEEECCSTTCC
T ss_pred EEEeCCCCccccceeeccccccccccccccccccccceEEEECCCCC-EEEEeccCCEEEEEEcCCCcceeeeecccccc
Confidence 999999767888888888642 33499999996 78999999999999998765321000000
Q ss_pred ---CCCCe------------eeEEEcCCCCCcceEEeCCCCCcEEEEEeCCCcEEEEecC
Q 014454 361 ---DGPPE------------LLFIHGGHTSKISDFSWNPCEDWVISSVAEDNILQIWQMA 405 (424)
Q Consensus 361 ---~~~~~------------~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~vw~~~ 405 (424)
..++. .......+...|..++|+|++. +|++++.++ +++|.-+
T Consensus 388 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~-~la~~~~~~-~~~~~~~ 445 (447)
T 3dw8_B 388 PRTVLKPRKVCASGKRKKDEISVDSLDFNKKILHTAWHPKEN-IIAVATTNN-LYIFQDK 445 (447)
T ss_dssp TTCBCCCCCEECSSCCCTTCEEGGGCCTTSCCCEEEECSSSS-EEEEECSSC-EEEEECC
T ss_pred cccccCCccccccCCcccccccccccccCCceeEEEECCCCC-EEEEEecce-eeeeccc
Confidence 00000 0000113456789999999999 688877665 8888654
No 81
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=100.00 E-value=1.6e-31 Score=273.38 Aligned_cols=286 Identities=17% Similarity=0.232 Sum_probs=233.3
Q ss_pred CccEEEEccCCCCCCCCCCceEEEEEeecCCCCCCCeEEEEEEECCCCCCCcccCCCCCcCCCCCCCCCCCCcEEEEEEe
Q 014454 43 PSLTVEWLPDREEPPGKDYSVQKMILGTHTSENEPNYLMLAQVQLPLDDSENDARHYDDDRSDFGGFGCANGKVQIIQQI 122 (424)
Q Consensus 43 p~~~~~~~p~~~~~~~~~~~~~~~~~gt~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 122 (424)
+..+++|.|+. ..++.|+ .+..|.++.+. .++ .+....
T Consensus 15 ~v~~i~~sp~~----------~~la~~~-----~~g~v~iwd~~--------------------------~~~-~~~~~~ 52 (814)
T 3mkq_A 15 RVKGIDFHPTE----------PWVLTTL-----YSGRVEIWNYE--------------------------TQV-EVRSIQ 52 (814)
T ss_dssp CEEEEEECSSS----------SEEEEEE-----TTSEEEEEETT--------------------------TTE-EEEEEE
T ss_pred ceEEEEECCCC----------CEEEEEe-----CCCEEEEEECC--------------------------CCc-eEEEEe
Confidence 36688999976 4566665 34567777541 111 222334
Q ss_pred ccCCceeEEEecCCCCcEEEEEeCCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCceeEEEecCCCCceEEEEeCCCc
Q 014454 123 NHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDDAQ 202 (424)
Q Consensus 123 ~h~~~v~~~~~~p~~~~~latg~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~ 202 (424)
.|.+.|++++|+|++. +||+|+.||.|+||++.+ ......+.+|...|.+++|+|+++ +|++++.||.
T Consensus 53 ~~~~~v~~~~~s~~~~-~l~~~~~dg~i~vw~~~~----------~~~~~~~~~~~~~v~~~~~s~~~~-~l~~~~~dg~ 120 (814)
T 3mkq_A 53 VTETPVRAGKFIARKN-WIIVGSDDFRIRVFNYNT----------GEKVVDFEAHPDYIRSIAVHPTKP-YVLSGSDDLT 120 (814)
T ss_dssp CCSSCEEEEEEEGGGT-EEEEEETTSEEEEEETTT----------CCEEEEEECCSSCEEEEEECSSSS-EEEEEETTSE
T ss_pred cCCCcEEEEEEeCCCC-EEEEEeCCCeEEEEECCC----------CcEEEEEecCCCCEEEEEEeCCCC-EEEEEcCCCE
Confidence 6999999999999886 899999999999999987 456778889999999999999988 7999999999
Q ss_pred EEEEeCCCCCCCCcccceeeeecCCccEeeEEEecCCCcEEEEEeCCCeEEEEEcCCCCCCCCeeeeec-cCCCeeEEEe
Q 014454 203 ICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVA-HQSEVNCLAF 281 (424)
Q Consensus 203 i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~dg~i~i~d~~~~~~~~~~~~~~~-~~~~v~~v~~ 281 (424)
|++||+.++. .....+.+|...|.+++|+|.+..++++++.||.|++||++.+.. ...+.. +...+.+++|
T Consensus 121 i~vw~~~~~~-----~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~v~vwd~~~~~~---~~~~~~~~~~~v~~~~~ 192 (814)
T 3mkq_A 121 VKLWNWENNW-----ALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTP---NFTLTTGQERGVNYVDY 192 (814)
T ss_dssp EEEEEGGGTS-----EEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCSSC---SEEEECCCTTCCCEEEE
T ss_pred EEEEECCCCc-----eEEEEEcCCCCcEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcc---eeEEecCCCCCEEEEEE
Confidence 9999997642 245567789999999999994445778999999999999987654 444444 4489999999
Q ss_pred cC--CCCeEEEEEeCCCcEEEEECCCCCCcceEecCCCCCEEEEEEcCCCCcEEEEEECCCeEEEeeCCCCCcccCCCCc
Q 014454 282 NP--FNEWILATGSTDKTVKLFDLRKISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPEDA 359 (424)
Q Consensus 282 ~~--~~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~ 359 (424)
+| ++. +|++|+.||.|++||+++ +.++..+..|...|.+++|+|+++ +|++++.||.|++||+..+
T Consensus 193 ~~~~~~~-~l~~~~~dg~i~~~d~~~-~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~dg~v~vwd~~~~--------- 260 (814)
T 3mkq_A 193 YPLPDKP-YMITASDDLTIKIWDYQT-KSCVATLEGHMSNVSFAVFHPTLP-IIISGSEDGTLKIWNSSTY--------- 260 (814)
T ss_dssp CCSTTCC-EEEEECTTSEEEEEETTT-TEEEEEEECCSSCEEEEEECSSSS-EEEEEETTSCEEEEETTTC---------
T ss_pred EECCCCC-EEEEEeCCCEEEEEECCC-CcEEEEEcCCCCCEEEEEEcCCCC-EEEEEeCCCeEEEEECCCC---------
Confidence 99 777 699999999999999998 678888999999999999999996 7999999999999999874
Q ss_pred CCCCCeeeEEEcCCCCCcceEEeCCCCCcEEEEEeCCCcEEEEecCCc
Q 014454 360 EDGPPELLFIHGGHTSKISDFSWNPCEDWVISSVAEDNILQIWQMAEN 407 (424)
Q Consensus 360 ~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~ 407 (424)
..+..+..|...+.+++|+|++..++++++.++.+.+|++...
T Consensus 261 -----~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (814)
T 3mkq_A 261 -----KVEKTLNVGLERSWCIATHPTGRKNYIASGFDNGFTVLSLGND 303 (814)
T ss_dssp -----SEEEEECCSSSSEEEEEECTTCGGGEEEEEETTEEEEEECSCC
T ss_pred -----cEEEEeecCCCcEEEEEEccCCCceEEEEEeCCCEEEEEcCCC
Confidence 5567778888899999999998765444555777999987654
No 82
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=100.00 E-value=2.2e-32 Score=252.89 Aligned_cols=248 Identities=15% Similarity=0.235 Sum_probs=196.6
Q ss_pred EeccCCceeEEEecCCC--CcEEEEEeCCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCceeEEEecCCCCceEEEEe
Q 014454 121 QINHDGEVNRARYMPQN--PFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGS 198 (424)
Q Consensus 121 ~~~h~~~v~~~~~~p~~--~~~latg~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~ 198 (424)
...|.+.|++++|+|++ ..+||+|+.||.|+||++.. ........+.+|...|.+++|+|++. +|++++
T Consensus 35 ~~~h~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~--------~~~~~~~~~~~h~~~v~~~~~~~~~~-~l~s~~ 105 (368)
T 3mmy_A 35 TSSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQD--------SGQTIPKAQQMHTGPVLDVCWSDDGS-KVFTAS 105 (368)
T ss_dssp SSCCSSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECT--------TSCEEEEEEEECSSCEEEEEECTTSS-EEEEEE
T ss_pred ccCCCCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCC--------CCceeEEEeccccCCEEEEEECcCCC-EEEEEc
Confidence 34799999999999985 45899999999999999986 11233367888999999999999887 799999
Q ss_pred CCCcEEEEeCCCCCCCCcccceeeeecCCccEeeEEE--ecCCCcEEEEEeCCCeEEEEEcCCCCCCCCeeeeeccC---
Q 014454 199 DDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAW--HLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQ--- 273 (424)
Q Consensus 199 ~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~~~~~~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~--- 273 (424)
.||.|++||+++.. ......|...|.+++| ++++. +|++++.||.|++||+++++. +..+..+.
T Consensus 106 ~dg~v~iwd~~~~~-------~~~~~~~~~~v~~~~~~~~~~~~-~l~~~~~dg~i~vwd~~~~~~---~~~~~~~~~~~ 174 (368)
T 3mmy_A 106 CDKTAKMWDLSSNQ-------AIQIAQHDAPVKTIHWIKAPNYS-CVMTGSWDKTLKFWDTRSSNP---MMVLQLPERCY 174 (368)
T ss_dssp TTSEEEEEETTTTE-------EEEEEECSSCEEEEEEEECSSCE-EEEEEETTSEEEEECSSCSSC---SEEEECSSCEE
T ss_pred CCCcEEEEEcCCCC-------ceeeccccCceEEEEEEeCCCCC-EEEEccCCCcEEEEECCCCcE---EEEEecCCCce
Confidence 99999999998762 2235569999999999 77765 667999999999999998654 33332221
Q ss_pred --------------------------------------CCeeEEEecCCCC---eEEEEEeCCCcEEEEECCCCC--Ccc
Q 014454 274 --------------------------------------SEVNCLAFNPFNE---WILATGSTDKTVKLFDLRKIS--TAL 310 (424)
Q Consensus 274 --------------------------------------~~v~~v~~~~~~~---~~l~tg~~dg~i~iwd~~~~~--~~~ 310 (424)
..+.++++.+... ..+++|+.||.|++||++... ..+
T Consensus 175 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~i~~~~~~~~~~~~ 254 (368)
T 3mmy_A 175 CADVIYPMAVVATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYINPPNPAKDN 254 (368)
T ss_dssp EEEEETTEEEEEEGGGCEEEEECSSSCEEEEECCCSCSSCEEEEEEEECTTSCEEEEEEEETTSEEEEEESSCSCHHHHS
T ss_pred EEEecCCeeEEEeCCCcEEEEEeccccchhhhccccccCCCceEEEcccCCCCCCeEEEecCCCcEEEEecCCCCccccc
Confidence 2334444433222 238999999999999999743 456
Q ss_pred eEecCCCC------------CEEEEEEcCCCCcEEEEEECCCeEEEeeCCCCCcccCCCCcCCCCCeeeEEEcCCCCCcc
Q 014454 311 HTFDSHKE------------EVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPEDAEDGPPELLFIHGGHTSKIS 378 (424)
Q Consensus 311 ~~~~~h~~------------~v~~~~~sp~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~ 378 (424)
..+..|.. .|++++|+|++. +|++++.||.|++||+..+ .++..+.+|...|.
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~-~l~s~~~dg~i~iwd~~~~--------------~~~~~~~~~~~~v~ 319 (368)
T 3mmy_A 255 FTFKCHRSNGTNTSAPQDIYAVNGIAFHPVHG-TLATVGSDGRFSFWDKDAR--------------TKLKTSEQLDQPIS 319 (368)
T ss_dssp EEEECSEEC----CCCEEECCEEEEEECTTTC-CEEEEETTSCEEEEETTTT--------------EEEEECCCCSSCEE
T ss_pred eeeeeeecccccccccccccceEEEEEecCCC-EEEEEccCCeEEEEECCCC--------------cEEEEecCCCCCce
Confidence 77777776 799999999996 7999999999999999874 56778889999999
Q ss_pred eEEeCCCCCcEEEEEeCCCcEEEEec
Q 014454 379 DFSWNPCEDWVISSVAEDNILQIWQM 404 (424)
Q Consensus 379 ~~~~~~~~~~~l~s~~~dg~i~vw~~ 404 (424)
+++|+|+++ +|++++.|+..+.|++
T Consensus 320 ~~~~s~~g~-~l~~~s~d~~~~~~~~ 344 (368)
T 3mmy_A 320 ACCFNHNGN-IFAYASSYDWSKGHEF 344 (368)
T ss_dssp EEEECTTSS-CEEEEECCCSTTCGGG
T ss_pred EEEECCCCC-eEEEEecccccccccc
Confidence 999999999 5888888876555554
No 83
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=100.00 E-value=3.5e-31 Score=253.39 Aligned_cols=249 Identities=17% Similarity=0.267 Sum_probs=206.6
Q ss_pred EeccCCceeEEEecCCCCcEEEEEeCCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCceeEEEecC--CCCceEEEEe
Q 014454 121 QINHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSK--FKEGHLLSGS 198 (424)
Q Consensus 121 ~~~h~~~v~~~~~~p~~~~~latg~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~--~~~~~l~s~~ 198 (424)
..+|.+.|.+++|+|++ ++++|+.||+|++||+.+ ......+.+|...|.+++|++ ++. +|++|+
T Consensus 158 ~~~h~~~V~~l~~~~~~--~l~s~s~dg~i~vwd~~~----------~~~~~~~~~h~~~v~~l~~~~~~~~~-~l~s~s 224 (464)
T 3v7d_B 158 LSGHDGGVWALKYAHGG--ILVSGSTDRTVRVWDIKK----------GCCTHVFEGHNSTVRCLDIVEYKNIK-YIVTGS 224 (464)
T ss_dssp ECCCSSCEEEEEECSTT--EEEEEETTSCEEEEETTT----------TEEEEEECCCSSCEEEEEEEESSSCE-EEEEEE
T ss_pred EeCCCcCEEEEEEcCCC--EEEEEeCCCCEEEEECCC----------CcEEEEECCCCCccEEEEEecCCCCC-EEEEEc
Confidence 34799999999999976 799999999999999987 455678889999999999995 344 799999
Q ss_pred CCCcEEEEeCCCCCCCCcc-----------------cceeeeecCCccEeeEEEecCCCcEEEEEeCCCeEEEEEcCCCC
Q 014454 199 DDAQICLWDINAAPKNKSL-----------------EAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPS 261 (424)
Q Consensus 199 ~dg~i~iwd~~~~~~~~~~-----------------~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~dg~i~i~d~~~~~ 261 (424)
.||.|++||+.+....... .....+.+|...|.++. +++. ++++++.||.|++||+++++
T Consensus 225 ~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~--~~~~-~l~~~~~d~~i~vwd~~~~~ 301 (464)
T 3v7d_B 225 RDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTVS--GHGN-IVVSGSYDNTLIVWDVAQMK 301 (464)
T ss_dssp TTSCEEEEECCCCCCC------CCSSEEESCGGGCTTEEEEECCCSSCEEEEE--EETT-EEEEEETTSCEEEEETTTTE
T ss_pred CCCcEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEEccCccceEEEEc--CCCC-EEEEEeCCCeEEEEECCCCc
Confidence 9999999999876533211 02445677888888885 4454 66799999999999999865
Q ss_pred CCCCeeeeeccCCCeeEEEecCCCCeEEEEEeCCCcEEEEECCCCCCcceEecCCCCCEEEEEEcCCCCcEEEEEECCCe
Q 014454 262 VSKPVQSVVAHQSEVNCLAFNPFNEWILATGSTDKTVKLFDLRKISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRR 341 (424)
Q Consensus 262 ~~~~~~~~~~~~~~v~~v~~~~~~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~l~s~~~dg~ 341 (424)
.+..+.+|...|.+++|+|++. .+++|+.||.|++||+++ ++++..+.+|...|.+++|++ .+|++++.||.
T Consensus 302 ---~~~~~~~~~~~v~~~~~~~~~~-~l~sg~~dg~i~vwd~~~-~~~~~~~~~h~~~v~~~~~~~---~~l~s~s~dg~ 373 (464)
T 3v7d_B 302 ---CLYILSGHTDRIYSTIYDHERK-RCISASMDTTIRIWDLEN-GELMYTLQGHTALVGLLRLSD---KFLVSAAADGS 373 (464)
T ss_dssp ---EEEEECCCSSCEEEEEEETTTT-EEEEEETTSCEEEEETTT-TEEEEEECCCSSCEEEEEECS---SEEEEEETTSE
T ss_pred ---EEEEecCCCCCEEEEEEcCCCC-EEEEEeCCCcEEEEECCC-CcEEEEEeCCCCcEEEEEEcC---CEEEEEeCCCc
Confidence 3777888999999999999988 699999999999999998 788999999999999999984 47999999999
Q ss_pred EEEeeCCCCCcccCCCCcCCCCCeeeEEEcCCCCCcceEEeCCCCCcEEEEEeCCCcEEEEecCCccCC
Q 014454 342 LMVWDLSRIDEEQTPEDAEDGPPELLFIHGGHTSKISDFSWNPCEDWVISSVAEDNILQIWQMAENIYH 410 (424)
Q Consensus 342 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~~ 410 (424)
|++||++... ..... .|...+..++|++++. ++++++ ||.|++||+.++.+.
T Consensus 374 v~vwd~~~~~--------------~~~~~-~~~~~~~~~~~~~~~~-~l~~~~-dg~i~iwd~~~g~~~ 425 (464)
T 3v7d_B 374 IRGWDANDYS--------------RKFSY-HHTNLSAITTFYVSDN-ILVSGS-ENQFNIYNLRSGKLV 425 (464)
T ss_dssp EEEEETTTCC--------------EEEEE-ECTTCCCEEEEEECSS-EEEEEE-TTEEEEEETTTCCEE
T ss_pred EEEEECCCCc--------------eeeee-cCCCCccEEEEEeCCC-EEEEec-CCeEEEEECCCCcEE
Confidence 9999998742 22222 3556678889999999 688877 899999999988654
No 84
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=100.00 E-value=6.1e-33 Score=263.51 Aligned_cols=259 Identities=12% Similarity=0.163 Sum_probs=190.0
Q ss_pred EeccCCceeEEEecCCCCcEEEEEeCCCeEEEEeCCCCCCCCCCCCCCCCcEEEec------------CCCceeEEE--e
Q 014454 121 QINHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRG------------HSTEGYGLS--W 186 (424)
Q Consensus 121 ~~~h~~~v~~~~~~p~~~~~latg~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~------------h~~~v~~l~--~ 186 (424)
.+.|.+.|++++|+|++. +|++|+.||.|++||+.... .......+.+ +...+.++. +
T Consensus 107 ~~~h~~~v~~~~~~~~~~-~l~s~s~dg~i~vwd~~~~~-------~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 178 (437)
T 3gre_A 107 TYDCSSTVTQITMIPNFD-AFAVSSKDGQIIVLKVNHYQ-------QESEVKFLNCECIRKINLKNFGKNEYAVRMRAFV 178 (437)
T ss_dssp EEECSSCEEEEEECTTSS-EEEEEETTSEEEEEEEEEEE-------ETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEE
T ss_pred eccCCCCEEEEEEeCCCC-EEEEEeCCCEEEEEEecccc-------CCceeeccccceeEEEEccCcccccCceEEEEEE
Confidence 346999999999999876 89999999999999995200 0111222221 445566666 4
Q ss_pred cCCCCceEEEEeCCCcEEEEeCCCCCCCCcccceeeeec--CCccEeeEEEecCCCcEEEEEeCCCeEEEEEcCCCCCCC
Q 014454 187 SKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKV--HEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSK 264 (424)
Q Consensus 187 ~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~~~~s~~~dg~i~i~d~~~~~~~~ 264 (424)
++++. +|++|+.||.|++||+++.. .+..+.. |...|++++|+|++. +|++|+.||.|++||++++..
T Consensus 179 ~~~~~-~l~~~~~d~~i~iwd~~~~~------~~~~~~~~~h~~~v~~~~~s~~~~-~l~s~~~dg~i~iwd~~~~~~-- 248 (437)
T 3gre_A 179 NEEKS-LLVALTNLSRVIIFDIRTLE------RLQIIENSPRHGAVSSICIDEECC-VLILGTTRGIIDIWDIRFNVL-- 248 (437)
T ss_dssp CSSCE-EEEEEETTSEEEEEETTTCC------EEEEEECCGGGCCEEEEEECTTSC-EEEEEETTSCEEEEETTTTEE--
T ss_pred cCCCC-EEEEEeCCCeEEEEeCCCCe------eeEEEccCCCCCceEEEEECCCCC-EEEEEcCCCeEEEEEcCCccE--
Confidence 46565 89999999999999998763 4555666 889999999999976 567999999999999998553
Q ss_pred Ceeeee-ccCCCeeEEEecC----CCCeEEEEEeCCCcEEEEECCCCCCcceEecC------------------------
Q 014454 265 PVQSVV-AHQSEVNCLAFNP----FNEWILATGSTDKTVKLFDLRKISTALHTFDS------------------------ 315 (424)
Q Consensus 265 ~~~~~~-~~~~~v~~v~~~~----~~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~~------------------------ 315 (424)
+..+. .|..+|++++|+| ++. +|++|+.||.|++||+++ +..+..+.+
T Consensus 249 -~~~~~~~~~~~v~~~~~~~~~s~~~~-~l~s~~~dg~i~iwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 325 (437)
T 3gre_A 249 -IRSWSFGDHAPITHVEVCQFYGKNSV-IVVGGSSKTFLTIWNFVK-GHCQYAFINSDEQPSMEHFLPIEKGLEELNFCG 325 (437)
T ss_dssp -EEEEBCTTCEEEEEEEECTTTCTTEE-EEEEESTTEEEEEEETTT-TEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCC
T ss_pred -EEEEecCCCCceEEEEeccccCCCcc-EEEEEcCCCcEEEEEcCC-CcEEEEEEcCCCCCccceecccccccccceecc
Confidence 55554 6778999996665 454 799999999999999997 455444442
Q ss_pred --CCCCEEEEEEcCCCCcEEEEEECCCeEEEeeCCCCCcccCCCCcCCC-----------------------CCeeeEEE
Q 014454 316 --HKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPEDAEDG-----------------------PPELLFIH 370 (424)
Q Consensus 316 --h~~~v~~~~~sp~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~-----------------------~~~~~~~~ 370 (424)
|...|++++|+ ++ .+|++++.|+.|++||+..+............ ........
T Consensus 326 ~~~~~~v~~l~~~-~~-~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 403 (437)
T 3gre_A 326 IRSLNALSTISVS-ND-KILLTDEATSSIVMFSLNELSSSKAVISPSRFSDVFIPTQVTANLTMLLRKMKRTSTHSVDDS 403 (437)
T ss_dssp CCSGGGGCCEEEE-TT-EEEEEEGGGTEEEEEETTCGGGCEEEECC--CCCEEEEEEEETTEEEEEEECC----------
T ss_pred cccCCceEEEEEC-Cc-eEEEecCCCCeEEEEECCCcccceEEecccccCceEEEEEeecceEEEEEecccccccccCcc
Confidence 55678899999 55 58999999999999999887644322211000 00011122
Q ss_pred cCCCCCcceEEeCCC--CCcEEEEEeCCCcEEEEe
Q 014454 371 GGHTSKISDFSWNPC--EDWVISSVAEDNILQIWQ 403 (424)
Q Consensus 371 ~~h~~~v~~~~~~~~--~~~~l~s~~~dg~i~vw~ 403 (424)
..|...|++++|+++ +. +|++++.||.|+||+
T Consensus 404 ~~h~~~I~~i~~~~~~~~~-~l~s~~~dG~I~iw~ 437 (437)
T 3gre_A 404 LYHHDIINSISTCEVDETP-LLVACDNSGLIGIFQ 437 (437)
T ss_dssp ---CCCEEEEEEEESSSSE-EEEEEETTSCEEEEC
T ss_pred cccccceeeEeeeccCCce-EEEEEcCCceEEEeC
Confidence 348999999999998 55 899999999999995
No 85
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=100.00 E-value=6.8e-32 Score=288.22 Aligned_cols=249 Identities=18% Similarity=0.341 Sum_probs=215.9
Q ss_pred EEEeccCCceeEEEecCCCCcEEEEEeCCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCceeEEEecCCCCceEEEEe
Q 014454 119 IQQINHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGS 198 (424)
Q Consensus 119 ~~~~~h~~~v~~~~~~p~~~~~latg~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~ 198 (424)
....+|.+.|++++|+|+++ ++|+|+.||.|+|||+.+ ......+.+|...|.+++|+|++. +|++|+
T Consensus 609 ~~~~~h~~~v~~~~~s~~~~-~l~s~~~d~~i~vw~~~~----------~~~~~~~~~h~~~v~~~~~s~~~~-~l~s~~ 676 (1249)
T 3sfz_A 609 LVVRPHTDAVYHACFSQDGQ-RIASCGADKTLQVFKAET----------GEKLLDIKAHEDEVLCCAFSSDDS-YIATCS 676 (1249)
T ss_dssp EEECCCSSCEEEEEECTTSS-EEEEEETTSCEEEEETTT----------CCEEEEECCCSSCEEEEEECTTSS-EEEEEE
T ss_pred EEEecccccEEEEEECCCCC-EEEEEeCCCeEEEEECCC----------CCEEEEeccCCCCEEEEEEecCCC-EEEEEe
Confidence 34558999999999999987 899999999999999987 466778899999999999999887 899999
Q ss_pred CCCcEEEEeCCCCCCCCcccceeeeecCCccEeeEEEecCC-CcEEEEEeCCCeEEEEEcCCCCCCCCeeeeeccCCCee
Q 014454 199 DDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRH-EYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVN 277 (424)
Q Consensus 199 ~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~~~~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~ 277 (424)
.||.|++||+.++ ..+..+.+|...|.+++|+|++ ..++++|+.||.|++||++++.. +..+.+|...|+
T Consensus 677 ~d~~v~vwd~~~~------~~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~---~~~~~~h~~~v~ 747 (1249)
T 3sfz_A 677 ADKKVKIWDSATG------KLVHTYDEHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKEC---RNTMFGHTNSVN 747 (1249)
T ss_dssp TTSEEEEEETTTC------CEEEEEECCSSCEEEEEECSSSSCCEEEEEETTSCEEEEETTSSSE---EEEECCCSSCEE
T ss_pred CCCeEEEEECCCC------ceEEEEcCCCCcEEEEEEecCCCceEEEEEeCCCeEEEEECCCcch---hheecCCCCCEE
Confidence 9999999999876 3466778899999999999963 45778999999999999998764 777889999999
Q ss_pred EEEecCCCCeEEEEEeCCCcEEEEECCCCCCcceE---------------------------------------------
Q 014454 278 CLAFNPFNEWILATGSTDKTVKLFDLRKISTALHT--------------------------------------------- 312 (424)
Q Consensus 278 ~v~~~~~~~~~l~tg~~dg~i~iwd~~~~~~~~~~--------------------------------------------- 312 (424)
+++|+|++. +|++|+.||.|++||+++. .....
T Consensus 748 ~~~~sp~~~-~l~s~s~dg~v~vwd~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~~~v~~~d 825 (1249)
T 3sfz_A 748 HCRFSPDDE-LLASCSADGTLRLWDVRSA-NERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVAAKNKVLLFD 825 (1249)
T ss_dssp EEEECSSTT-EEEEEESSSEEEEEEGGGT-EEEEEEECCCCC--------CCCCCBCCCCBCTTSSEEEEEETTEEEEEE
T ss_pred EEEEecCCC-EEEEEECCCeEEEEeCCCC-cccceecccccccccCCccccccceEEEEEECCCCCEEEEEcCCcEEEEE
Confidence 999999998 6999999999999998752 11111
Q ss_pred ----------ecCCCCCEEEEEEcCCCCcEEEEEECCCeEEEeeCCCCCcccCCCCcCCCCCeeeEEEcCCCCCcceEEe
Q 014454 313 ----------FDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPEDAEDGPPELLFIHGGHTSKISDFSW 382 (424)
Q Consensus 313 ----------~~~h~~~v~~~~~sp~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~ 382 (424)
..+|...|.+++|+|++. ++++++.||.|++||+... ..+..+.+|...|.+++|
T Consensus 826 ~~~~~~~~~~~~~~~~~v~~~~~sp~~~-~l~~~~~dg~v~vwd~~~~--------------~~~~~~~~h~~~v~~v~~ 890 (1249)
T 3sfz_A 826 IHTSGLLAEIHTGHHSTIQYCDFSPYDH-LAVIALSQYCVELWNIDSR--------------LKVADCRGHLSWVHGVMF 890 (1249)
T ss_dssp TTTCCEEEEEECSSSSCCCEEEECSSTT-EEEEECSSSCEEEEETTTT--------------EEEEEECCCSSCEEEEEE
T ss_pred ecCCCceeEEcCCCCCceEEEEEcCCCC-EEEEEeCCCeEEEEEcCCC--------------ceeeecCCCccceEEEEE
Confidence 126778899999999985 7889999999999999864 567788899999999999
Q ss_pred CCCCCcEEEEEeCCCcEEEEecCC
Q 014454 383 NPCEDWVISSVAEDNILQIWQMAE 406 (424)
Q Consensus 383 ~~~~~~~l~s~~~dg~i~vw~~~~ 406 (424)
+|+++ .|++++.||.|++|++..
T Consensus 891 spdg~-~l~s~s~dg~v~vw~~~~ 913 (1249)
T 3sfz_A 891 SPDGS-SFLTASDDQTIRVWETKK 913 (1249)
T ss_dssp CTTSS-EEEEEETTSCEEEEEHHH
T ss_pred CCCCC-EEEEEeCCCeEEEEEccc
Confidence 99999 689999999999999865
No 86
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=100.00 E-value=3e-32 Score=247.35 Aligned_cols=255 Identities=19% Similarity=0.241 Sum_probs=196.7
Q ss_pred CccEEEEccCCCCCCCCCCceEEEEEeecCCCCCCCeEEEEEEECCCCCCCcccCCCCCcCCCCCCCCCCCCcEEEEEEe
Q 014454 43 PSLTVEWLPDREEPPGKDYSVQKMILGTHTSENEPNYLMLAQVQLPLDDSENDARHYDDDRSDFGGFGCANGKVQIIQQI 122 (424)
Q Consensus 43 p~~~~~~~p~~~~~~~~~~~~~~~~~gt~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 122 (424)
+..+++|.|+. ..++.|+ .+..++++.+.-. ....+....
T Consensus 15 ~V~~v~~s~~g----------~~lasgs-----~D~~v~lwd~~~~-------------------------~~~~~~~l~ 54 (316)
T 3bg1_A 15 MIHDAQMDYYG----------TRLATCS-----SDRSVKIFDVRNG-------------------------GQILIADLR 54 (316)
T ss_dssp CEEEEEECGGG----------CEEEEEE-----TTTEEEEEEEETT-------------------------EEEEEEEEE
T ss_pred eEEEeeEcCCC----------CEEEEEe-----CCCeEEEEEecCC-------------------------CcEEEEEEc
Confidence 46788998875 4566555 5678999887411 011223345
Q ss_pred ccCCceeEEEecCC-CCcEEEEEeCCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCceeEEEecCCC-CceEEEEeCC
Q 014454 123 NHDGEVNRARYMPQ-NPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFK-EGHLLSGSDD 200 (424)
Q Consensus 123 ~h~~~v~~~~~~p~-~~~~latg~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~-~~~l~s~~~d 200 (424)
+|.+.|++++|+|. ...+||+|+.|++|+|||+.. +.......+.+|...|.+++|+|+. ..+|++|+.|
T Consensus 55 gH~~~V~~v~~~~~~~~~~l~s~s~D~~v~iWd~~~--------~~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D 126 (316)
T 3bg1_A 55 GHEGPVWQVAWAHPMYGNILASCSYDRKVIIWREEN--------GTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSD 126 (316)
T ss_dssp CCSSCEEEEEECCGGGSSCEEEEETTSCEEEECCSS--------SCCCEEEEECCCSSCCCEEEECCTTTCSCEEEECSS
T ss_pred CCCccEEEEEeCCCCCCCEEEEEECCCEEEEEECCC--------CcceEEEEccCCCCceEEEEECCCCCCcEEEEEcCC
Confidence 79999999999863 234899999999999999976 2234456778999999999999973 2379999999
Q ss_pred CcEEEEeCCCCCCCCcccceeeeecCCccEeeEEEecCC----------------CcEEEEEeCCCeEEEEEcCCCCCCC
Q 014454 201 AQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRH----------------EYLFGSVGDDQYLLIWDLRTPSVSK 264 (424)
Q Consensus 201 g~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~----------------~~~~~s~~~dg~i~i~d~~~~~~~~ 264 (424)
|.|++||++.... ......+.+|...|.+++|+|+. ..+|++|+.|+.|++||++......
T Consensus 127 ~~i~lwd~~~~~~---~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~ 203 (316)
T 3bg1_A 127 GAISLLTYTGEGQ---WEVKKINNAHTIGCNAVSWAPAVVPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWK 203 (316)
T ss_dssp SCEEEEEECSSSC---EEECCBTTSSSSCBCCCEECCCCCC------CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEE
T ss_pred CCEEEEecCCCCC---cceeeeeccccCCcceEEEccccCCccccccccccCccccceEEEecCCCeEEEEEeCCCCccc
Confidence 9999999976421 12234456789999999999973 2467899999999999997643223
Q ss_pred CeeeeeccCCCeeEEEecCCC---CeEEEEEeCCCcEEEEECCCCC---CcceEecCCCCCEEEEEEcCCCCcEEEEEEC
Q 014454 265 PVQSVVAHQSEVNCLAFNPFN---EWILATGSTDKTVKLFDLRKIS---TALHTFDSHKEEVFQVGWNPKNETILASCCL 338 (424)
Q Consensus 265 ~~~~~~~~~~~v~~v~~~~~~---~~~l~tg~~dg~i~iwd~~~~~---~~~~~~~~h~~~v~~~~~sp~~~~~l~s~~~ 338 (424)
.+..+.+|...|++++|+|++ ..+||+|+.||+|++||++... .....+..|...|.+++|+|++. +||+++.
T Consensus 204 ~~~~l~~h~~~V~~v~~sp~~~~~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~~v~~v~~sp~g~-~las~~~ 282 (316)
T 3bg1_A 204 EEQKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRVFIWTCDDASSNTWSPKLLHKFNDVVWHVSWSITAN-ILAVSGG 282 (316)
T ss_dssp EEECCBCCSSCEEEEECCCCSSCSCCEEEEEETTCEEEEEECSSTTCCCCBCCEEEECSSCEEEEEECTTTC-CEEEEES
T ss_pred eeeecccCCCceEEEEecCCCCCCCceEEEEcCCCeEEEEEccCccccchhhhhhhcCCCcEEEEEEcCCCC-EEEEEcC
Confidence 456678899999999999986 2479999999999999997621 12345567889999999999996 7999999
Q ss_pred CCeEEEeeCCC
Q 014454 339 GRRLMVWDLSR 349 (424)
Q Consensus 339 dg~i~iwd~~~ 349 (424)
|+.|+||+...
T Consensus 283 D~~v~lw~~~~ 293 (316)
T 3bg1_A 283 DNKVTLWKESV 293 (316)
T ss_dssp SSCEEEEEECT
T ss_pred CCeEEEEEECC
Confidence 99999999763
No 87
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=100.00 E-value=2.6e-32 Score=255.39 Aligned_cols=238 Identities=8% Similarity=0.012 Sum_probs=167.3
Q ss_pred CcEEEEEeCCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCceeEEEecC--------CCCceEEEEeCCCcEEEEeCC
Q 014454 138 PFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSK--------FKEGHLLSGSDDAQICLWDIN 209 (424)
Q Consensus 138 ~~~latg~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~--------~~~~~l~s~~~dg~i~iwd~~ 209 (424)
..+||+|+.|++|+|||....... .......+.+|.+.|++++|+| ++. +|++|+.|++|+|||+.
T Consensus 101 ~~~las~~~d~~v~lw~~~~~~~~-----~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~-~las~s~D~tv~~Wd~~ 174 (393)
T 4gq1_A 101 SLFLACVCQDNTVRLIITKNETII-----TQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQ-VIASVGDDCTLIIWRLT 174 (393)
T ss_dssp EEEEEEEETTSCEEEEEEETTEEE-----EEEEECTTTSCSSCEEEEEEEEEECTTCSEEEE-EEEEEETTSEEEEEEEE
T ss_pred CCEEEEEeCCCcEEEEECCCCccc-----eeeeecccCCCCCceEEEEEccccccccCCCCC-EEEEEECCCeEEEEECC
Confidence 358999999999999998761100 0011223568999999999997 454 89999999999999997
Q ss_pred CCCCCCcccceeeeecCCccEeeEEEecCCCcEEEEEeCCCeEEEEEcCCCCCCCCe----------------------e
Q 014454 210 AAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPV----------------------Q 267 (424)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~dg~i~i~d~~~~~~~~~~----------------------~ 267 (424)
+. .....+..|...|.+++|+|++..+|++++.||+|++||++++...... .
T Consensus 175 ~~------~~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~ 248 (393)
T 4gq1_A 175 DE------GPILAGYPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPLVNTC 248 (393)
T ss_dssp TT------EEEEEEEECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC----------CSCCCSEEEESGGGC---
T ss_pred CC------ceeeeecCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCCcccceEEecccccceeee
Confidence 65 2345566789999999999998878899999999999999876532111 1
Q ss_pred eeeccCCCeeEEEec-CCCCeEEEEEeCCCcEEEEECCCCCCcceEecCCCCCEEEE------------------EEcC-
Q 014454 268 SVVAHQSEVNCLAFN-PFNEWILATGSTDKTVKLFDLRKISTALHTFDSHKEEVFQV------------------GWNP- 327 (424)
Q Consensus 268 ~~~~~~~~v~~v~~~-~~~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~~h~~~v~~~------------------~~sp- 327 (424)
...+|...+.++.|. |++. .|++++.|+++++||++. .+....+..|...+..+ .|+|
T Consensus 249 ~~~~~~~~v~~v~~~~~dg~-~l~s~s~d~~i~vwd~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (393)
T 4gq1_A 249 HSSGIASSLANVRWIGSDGS-GILAMCKSGAWLRWNLFA-NNDYNEISDSTMKLGPKNLLPNVQGISLFPSLLGACPHPR 326 (393)
T ss_dssp ---CCSSSCSEEEEETTTTC-EEEEECTTSEEEEEEC--------------------CCSCSEEEECSSCCSSCCEECSS
T ss_pred ecccccccceeeeeecCCCC-EEEEEeCCCCEEEEECcc-CCCCceEeeecCccccEEEccccccccccCcceeEEEccC
Confidence 123577889999987 6776 699999999999999986 44444444444333333 3333
Q ss_pred CCCcEEEEEECCCeEEEeeCCCCCcccCCCCcCCCCCeeeEEEcCCCCCcceEEeCCCCCcEEEEEeCCCcEEEEecC
Q 014454 328 KNETILASCCLGRRLMVWDLSRIDEEQTPEDAEDGPPELLFIHGGHTSKISDFSWNPCEDWVISSVAEDNILQIWQMA 405 (424)
Q Consensus 328 ~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~vw~~~ 405 (424)
.+..++++|+.||.|+|||+..+ .......+|...|.+++|+|+|+ +|++++.+| +.+|++.
T Consensus 327 ~~~~~~~sgs~Dg~V~lwd~~~~--------------~~~~~~~~~~~~V~svafspdG~-~LA~as~~G-v~lvrL~ 388 (393)
T 4gq1_A 327 YMDYFATAHSQHGLIQLINTYEK--------------DSNSIPIQLGMPIVDFCWHQDGS-HLAIATEGS-VLLTRLM 388 (393)
T ss_dssp CTTEEEEEETTTTEEEEEETTCT--------------TCCEEEEECSSCEEEEEECTTSS-EEEEEESSE-EEEEEEG
T ss_pred CCCEEEEEECCCCEEEEEECCCC--------------cEEEEecCCCCcEEEEEEcCCCC-EEEEEeCCC-eEEEEEe
Confidence 33446778888999999999875 33444567788999999999999 688888766 6666653
No 88
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=100.00 E-value=2.2e-31 Score=249.97 Aligned_cols=248 Identities=21% Similarity=0.327 Sum_probs=201.6
Q ss_pred EEEEEeccCCc--eeEEEecCCCCcEEEEEeCCCeEEEEeCCCCCCCCCCCCCCCCcEEEec-CCCceeEEEecCCCCce
Q 014454 117 QIIQQINHDGE--VNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRG-HSTEGYGLSWSKFKEGH 193 (424)
Q Consensus 117 ~~~~~~~h~~~--v~~~~~~p~~~~~latg~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~-h~~~v~~l~~~~~~~~~ 193 (424)
.++..-+|... +.++.|++ . .+++++.||.|++|++.+ ......+.. |...|.+++|+|++. +
T Consensus 83 ~~~~~~~~~~~~~~~~~~~s~--~-~l~~~~~d~~v~lw~~~~----------~~~~~~~~~~~~~~v~~v~~s~~~~-~ 148 (401)
T 4aez_A 83 RVLDAPGIIDDYYLNLLDWSN--L-NVVAVALERNVYVWNADS----------GSVSALAETDESTYVASVKWSHDGS-F 148 (401)
T ss_dssp EEEECTTCCCCTTCBCEEECT--T-SEEEEEETTEEEEEETTT----------CCEEEEEECCTTCCEEEEEECTTSS-E
T ss_pred eeeeCCCCcCCceEEEEeecC--C-CEEEEECCCeEEEeeCCC----------CcEeEeeecCCCCCEEEEEECCCCC-E
Confidence 34444456654 45566665 3 366678899999999987 233344443 889999999999887 7
Q ss_pred EEEEeCCCcEEEEeCCCCCCCCcccceeeeecCCccEeeEEEecCCCcEEEEEeCCCeEEEEEcCCCCCCCCeeeeeccC
Q 014454 194 LLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQ 273 (424)
Q Consensus 194 l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~ 273 (424)
|++|+.||.|++||+.++ ..+..+.+|...|.+++|++ .++++++.||.|++||++.... .+..+..|.
T Consensus 149 l~~~~~dg~i~iwd~~~~------~~~~~~~~~~~~v~~~~~~~---~~l~~~~~dg~i~i~d~~~~~~--~~~~~~~~~ 217 (401)
T 4aez_A 149 LSVGLGNGLVDIYDVESQ------TKLRTMAGHQARVGCLSWNR---HVLSSGSRSGAIHHHDVRIANH--QIGTLQGHS 217 (401)
T ss_dssp EEEEETTSCEEEEETTTC------CEEEEECCCSSCEEEEEEET---TEEEEEETTSEEEEEETTSSSC--EEEEEECCS
T ss_pred EEEECCCCeEEEEECcCC------eEEEEecCCCCceEEEEECC---CEEEEEcCCCCEEEEecccCcc--eeeEEcCCC
Confidence 999999999999999876 34566778999999999953 3678999999999999985442 467778899
Q ss_pred CCeeEEEecCCCCeEEEEEeCCCcEEEEECCCCCCcceEecCCCCCEEEEEEcCCCCcEEEEEE--CCCeEEEeeCCCCC
Q 014454 274 SEVNCLAFNPFNEWILATGSTDKTVKLFDLRKISTALHTFDSHKEEVFQVGWNPKNETILASCC--LGRRLMVWDLSRID 351 (424)
Q Consensus 274 ~~v~~v~~~~~~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~l~s~~--~dg~i~iwd~~~~~ 351 (424)
..|.+++|+|++. +|++|+.||.|++||+++ ..++..+..|...|.+++|+|++..++++++ .|+.|++||+..+
T Consensus 218 ~~v~~~~~~~~~~-~l~s~~~d~~v~iwd~~~-~~~~~~~~~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~- 294 (401)
T 4aez_A 218 SEVCGLAWRSDGL-QLASGGNDNVVQIWDARS-SIPKFTKTNHNAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAATG- 294 (401)
T ss_dssp SCEEEEEECTTSS-EEEEEETTSCEEEEETTC-SSEEEEECCCSSCCCEEEECTTSTTEEEEECCTTTCEEEEEETTTC-
T ss_pred CCeeEEEEcCCCC-EEEEEeCCCeEEEccCCC-CCccEEecCCcceEEEEEECCCCCCEEEEecCCCCCEEEEEECCCC-
Confidence 9999999999887 699999999999999998 6788889999999999999999888888876 7999999999875
Q ss_pred cccCCCCcCCCCCeeeEEEcCCCCCcceEEeCCCCCcEEEE--EeCCCcEEEEecCCc
Q 014454 352 EEQTPEDAEDGPPELLFIHGGHTSKISDFSWNPCEDWVISS--VAEDNILQIWQMAEN 407 (424)
Q Consensus 352 ~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s--~~~dg~i~vw~~~~~ 407 (424)
..+..+. +...|.+++|+|++++ +++ |+.||.|++|++.++
T Consensus 295 -------------~~~~~~~-~~~~v~~~~~s~~~~~-l~~~~g~~dg~i~v~~~~~~ 337 (401)
T 4aez_A 295 -------------ARVNTVD-AGSQVTSLIWSPHSKE-IMSTHGFPDNNLSIWSYSSS 337 (401)
T ss_dssp -------------CEEEEEE-CSSCEEEEEECSSSSE-EEEEECTTTCEEEEEEEETT
T ss_pred -------------CEEEEEe-CCCcEEEEEECCCCCe-EEEEeecCCCcEEEEecCCc
Confidence 3344443 5567999999999995 555 338999999999875
No 89
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=100.00 E-value=9.6e-33 Score=261.98 Aligned_cols=220 Identities=14% Similarity=0.221 Sum_probs=180.5
Q ss_pred CCcEEEecCCCceeEEEecCCCCceEEEEeCCCcEEEEeCCCCCCCCcccceeeeecCCccEeeEEEecCCCcEEEEEeC
Q 014454 169 SPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGD 248 (424)
Q Consensus 169 ~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~ 248 (424)
.......+|...|++|+|+|.+..+||+|+.||.|+|||+..... .....+.+|.+.|++|+|+|.+..+|++|+.
T Consensus 110 ~~~~~~~~~~~~V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~~----~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~ 185 (435)
T 4e54_B 110 RILQKAAPFDRRATSLAWHPTHPSTVAVGSKGGDIMLWNFGIKDK----PTFIKGIGAGGSITGLKFNPLNTNQFYASSM 185 (435)
T ss_dssp TSCCEEEECSSCEEEEEECSSCTTCEEEEETTSCEEEECSSCCSC----CEEECCCSSSCCCCEEEECSSCTTEEEEECS
T ss_pred eecccCCCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEEECCCCCc----eeEEEccCCCCCEEEEEEeCCCCCEEEEEeC
Confidence 334567789999999999998777899999999999999987643 2234456899999999999966667889999
Q ss_pred CCeEEEEEcCCCCCCCCeeeeeccCCCeeEEEecCCCCeEEEEEeCCCcEEEEECCCCCCcceEecCCCCCEEEEEEcCC
Q 014454 249 DQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATGSTDKTVKLFDLRKISTALHTFDSHKEEVFQVGWNPK 328 (424)
Q Consensus 249 dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~~h~~~v~~~~~sp~ 328 (424)
||+|++||+++... ..+.....+...+.+++|+|++. +|++|+.||.|++||++. +.+..+.+|...|++++|+|+
T Consensus 186 D~~v~iwd~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-~l~~g~~dg~i~~wd~~~--~~~~~~~~h~~~v~~v~~~p~ 261 (435)
T 4e54_B 186 EGTTRLQDFKGNIL-RVFASSDTINIWFCSLDVSASSR-MVVTGDNVGNVILLNMDG--KELWNLRMHKKKVTHVALNPC 261 (435)
T ss_dssp SSCEEEEETTSCEE-EEEECCSSCSCCCCCEEEETTTT-EEEEECSSSBEEEEESSS--CBCCCSBCCSSCEEEEEECTT
T ss_pred CCEEEEeeccCCce-eEEeccCCCCccEEEEEECCCCC-EEEEEeCCCcEeeeccCc--ceeEEEecccceEEeeeecCC
Confidence 99999999986431 11112223445688999999988 799999999999999974 667888999999999999999
Q ss_pred CCcEEEEEECCCeEEEeeCCCCCcccCCCCcCCCCCeeeEEEcCCCCCcceEEeCCCCCcEEEEEeCCCcEEEEecCCcc
Q 014454 329 NETILASCCLGRRLMVWDLSRIDEEQTPEDAEDGPPELLFIHGGHTSKISDFSWNPCEDWVISSVAEDNILQIWQMAENI 408 (424)
Q Consensus 329 ~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~ 408 (424)
++.+|++++.|+.|+|||++...... .+....+|...|++++|+|++. +|++++.||.|+||++.++.
T Consensus 262 ~~~~~~s~s~d~~v~iwd~~~~~~~~-----------~~~~~~~h~~~v~~~~~spdg~-~l~s~~~D~~i~iwd~~~~~ 329 (435)
T 4e54_B 262 CDWFLATASVDQTVKIWDLRQVRGKA-----------SFLYSLPHRHPVNAACFSPDGA-RLLTTDQKSEIRVYSASQWD 329 (435)
T ss_dssp CSSEEEEEETTSBCCEEETTTCCSSS-----------CCSBCCBCSSCEEECCBCTTSS-EEEEEESSSCEEEEESSSSS
T ss_pred CceEEEEecCcceeeEEecccccccc-----------eEEEeeeccccccceeECCCCC-eeEEEcCCCEEEEEECCCCc
Confidence 98899999999999999998764322 1223357889999999999999 68999999999999998763
No 90
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=100.00 E-value=3.3e-31 Score=251.42 Aligned_cols=249 Identities=22% Similarity=0.391 Sum_probs=203.1
Q ss_pred EeccCCceeEEEecCCCCcEEEEEeCCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCceeEEEecCCCCceEEEEeCC
Q 014454 121 QINHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDD 200 (424)
Q Consensus 121 ~~~h~~~v~~~~~~p~~~~~latg~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~d 200 (424)
..+|.+.|.+++| ++ .+|++|+.||.|++||+.+ ......+.+|...|.+++|++ .+|++|+.|
T Consensus 169 ~~~h~~~v~~l~~--~~-~~l~sg~~dg~i~vwd~~~----------~~~~~~~~~h~~~v~~l~~~~---~~l~s~s~d 232 (435)
T 1p22_A 169 LTGHTGSVLCLQY--DE-RVIITGSSDSTVRVWDVNT----------GEMLNTLIHHCEAVLHLRFNN---GMMVTCSKD 232 (435)
T ss_dssp ECCCSSCEEEEEC--CS-SEEEEEETTSCEEEEESSS----------CCEEEEECCCCSCEEEEECCT---TEEEEEETT
T ss_pred EcCCCCcEEEEEE--CC-CEEEEEcCCCeEEEEECCC----------CcEEEEEcCCCCcEEEEEEcC---CEEEEeeCC
Confidence 3479999999999 44 4899999999999999987 456778889999999999974 379999999
Q ss_pred CcEEEEeCCCCCCCCcccceeeeecCCccEeeEEEecCCCcEEEEEeCCCeEEEEEcCCCCCCCCeeeeeccCCCeeEEE
Q 014454 201 AQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLA 280 (424)
Q Consensus 201 g~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~v~ 280 (424)
|.|++||+.+.... .....+.+|...|.+++|. + ..+++|+.||.|++||++++.. +..+..|...|.+++
T Consensus 233 g~i~vwd~~~~~~~---~~~~~~~~~~~~v~~~~~~--~-~~l~s~~~dg~i~vwd~~~~~~---~~~~~~~~~~v~~~~ 303 (435)
T 1p22_A 233 RSIAVWDMASPTDI---TLRRVLVGHRAAVNVVDFD--D-KYIVSASGDRTIKVWNTSTCEF---VRTLNGHKRGIACLQ 303 (435)
T ss_dssp SCEEEEECSSSSCC---EEEEEECCCSSCEEEEEEE--T-TEEEEEETTSEEEEEETTTCCE---EEEEECCSSCEEEEE
T ss_pred CcEEEEeCCCCCCc---eeeeEecCCCCcEEEEEeC--C-CEEEEEeCCCeEEEEECCcCcE---EEEEcCCCCcEEEEE
Confidence 99999999876432 2235567899999999993 4 3667999999999999998664 778889999999999
Q ss_pred ecCCCCeEEEEEeCCCcEEEEECCCCCCcceEecCCCCCEEEEEEcCCCCcEEEEEECCCeEEEeeCCCCCcccCCCCcC
Q 014454 281 FNPFNEWILATGSTDKTVKLFDLRKISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPEDAE 360 (424)
Q Consensus 281 ~~~~~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~ 360 (424)
|+ +. ++++|+.||.|++||+++ +.++..+.+|...|.+++| ++ .+|++|+.||.|++||+.........
T Consensus 304 ~~--~~-~l~~g~~dg~i~iwd~~~-~~~~~~~~~h~~~v~~~~~--~~-~~l~sg~~dg~i~vwd~~~~~~~~~~---- 372 (435)
T 1p22_A 304 YR--DR-LVVSGSSDNTIRLWDIEC-GACLRVLEGHEELVRCIRF--DN-KRIVSGAYDGKIKVWDLVAALDPRAP---- 372 (435)
T ss_dssp EE--TT-EEEEEETTSCEEEEETTT-CCEEEEECCCSSCEEEEEC--CS-SEEEEEETTSCEEEEEHHHHTSTTSC----
T ss_pred eC--CC-EEEEEeCCCeEEEEECCC-CCEEEEEeCCcCcEEEEEe--cC-CEEEEEeCCCcEEEEECCCCCCcccc----
Confidence 95 44 799999999999999998 7889999999999999999 44 47999999999999999765422111
Q ss_pred CCCCeeeEEEcCCCCCcceEEeCCCCCcEEEEEeCCCcEEEEecCCccC
Q 014454 361 DGPPELLFIHGGHTSKISDFSWNPCEDWVISSVAEDNILQIWQMAENIY 409 (424)
Q Consensus 361 ~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~ 409 (424)
....++..+.+|...|++++| ++. .|++++.||.|++||+.+...
T Consensus 373 -~~~~~~~~~~~h~~~v~~l~~--~~~-~l~s~s~Dg~i~iwd~~~~~~ 417 (435)
T 1p22_A 373 -AGTLCLRTLVEHSGRVFRLQF--DEF-QIVSSSHDDTILIWDFLNDPA 417 (435)
T ss_dssp -TTTTEEEEECCCSSCCCCEEE--CSS-CEEECCSSSEEEEEC------
T ss_pred -ccchheeeccCCCCCeEEEEe--CCC-EEEEEeCCCEEEEEECCCCCC
Confidence 011367788999999999999 566 589999999999999987644
No 91
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=100.00 E-value=9.9e-32 Score=254.58 Aligned_cols=272 Identities=17% Similarity=0.275 Sum_probs=211.3
Q ss_pred eccCCceeEEEecCCCC---------cEEEEEeC----CCeEEEEeCCCCCC--C------------CCC--CCC-CCCc
Q 014454 122 INHDGEVNRARYMPQNP---------FLIATKTV----SAEVYVFDYSKHPS--K------------PPL--DGA-CSPD 171 (424)
Q Consensus 122 ~~h~~~v~~~~~~p~~~---------~~latg~~----dg~v~iw~~~~~~~--~------------~~~--~~~-~~~~ 171 (424)
..-.-+..++.|.|+.. ..+++|+. ...|.++++.-... . ... ... ....
T Consensus 42 ~~l~wp~l~~~~~p~~~~~~~~~~~~~~~~~GT~t~~~~n~i~i~~~~lp~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~ 121 (430)
T 2xyi_A 42 HALEWPSLTAQWLPDVTKQDGKDYSVHRLILGTHTSDEQNHLLIASVQLPSEDAQFDGSHYDNEKGEFGGFGSVCGKIEI 121 (430)
T ss_dssp EECSSCCSCEEECSCCEECTTCSCEEEEEEEECCCSSSCEEEEEEEEEEC--------------------------CEEE
T ss_pred cCCCCCceEEEECcccccccCCCcceEEEEEEEcCCCCCCEEEEEEEECCCCccccccccccccccccccccCCCCceEE
Confidence 33445667888888642 45677664 34677776541000 0 000 000 0112
Q ss_pred EEEecCCCceeEEEecCCCCceEEEEeCCCcEEEEeCCCCCCC----CcccceeeeecCCccEeeEEEecCCCcEEEEEe
Q 014454 172 LRLRGHSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKN----KSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVG 247 (424)
Q Consensus 172 ~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~----~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~ 247 (424)
.....|.+.|++++|+|++..+|++++.||.|++|++...... .....+..+.+|...|.+++|+|++..+|++|+
T Consensus 122 ~~~~~h~~~v~~l~~~p~~~~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~ 201 (430)
T 2xyi_A 122 EIKINHEGEVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNPNLNGYLLSAS 201 (430)
T ss_dssp EEEEEESSCCSEEEEETTEEEEEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEECCSSCCCCEEECTTSTTEEEEEC
T ss_pred EEEEcCCCcEEEEEECCCCCcEEEEECCCCcEEEEECCCcccccCccccCCCcEEecCCCCCeEEEEeCCCCCCeEEEEe
Confidence 4456799999999999985568999999999999999763111 113456677889999999999999886788999
Q ss_pred CCCeEEEEEcCCCCCC----CCeeeeeccCCCeeEEEecCCCCeEEEEEeCCCcEEEEECCCCC--CcceEecCCCCCEE
Q 014454 248 DDQYLLIWDLRTPSVS----KPVQSVVAHQSEVNCLAFNPFNEWILATGSTDKTVKLFDLRKIS--TALHTFDSHKEEVF 321 (424)
Q Consensus 248 ~dg~i~i~d~~~~~~~----~~~~~~~~~~~~v~~v~~~~~~~~~l~tg~~dg~i~iwd~~~~~--~~~~~~~~h~~~v~ 321 (424)
.||.|++||++.+... .+...+..|...|.+++|+|.+..+|++++.||.|++||++... .++..+..|...|+
T Consensus 202 ~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~ 281 (430)
T 2xyi_A 202 DDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVDAHTAEVN 281 (430)
T ss_dssp TTSCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCSEEEECCSSCEE
T ss_pred CCCeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcceeEeecCCCCeE
Confidence 9999999999874321 12455668999999999999766789999999999999999843 67788889999999
Q ss_pred EEEEcCCCCcEEEEEECCCeEEEeeCCCCCcccCCCCcCCCCCeeeEEEcCCCCCcceEEeCCCCCcEEEEEeCCCcEEE
Q 014454 322 QVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPEDAEDGPPELLFIHGGHTSKISDFSWNPCEDWVISSVAEDNILQI 401 (424)
Q Consensus 322 ~~~~sp~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~v 401 (424)
+++|+|+++.+|++|+.||.|++||++... ..+..+.+|...|++++|+|+++++|++++.||.|+|
T Consensus 282 ~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~-------------~~~~~~~~h~~~v~~i~~sp~~~~~l~s~~~d~~i~i 348 (430)
T 2xyi_A 282 CLSFNPYSEFILATGSADKTVALWDLRNLK-------------LKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHV 348 (430)
T ss_dssp EEEECSSCTTEEEEEETTSEEEEEETTCTT-------------SCSEEEECCSSCEEEEEECSSCTTEEEEEETTSCCEE
T ss_pred EEEeCCCCCCEEEEEeCCCeEEEEeCCCCC-------------CCeEEeecCCCCEEEEEECCCCCCEEEEEeCCCcEEE
Confidence 999999998889999999999999998742 3466677899999999999999878999999999999
Q ss_pred EecCC
Q 014454 402 WQMAE 406 (424)
Q Consensus 402 w~~~~ 406 (424)
|++..
T Consensus 349 wd~~~ 353 (430)
T 2xyi_A 349 WDLSK 353 (430)
T ss_dssp EEGGG
T ss_pred EeCCC
Confidence 99987
No 92
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=3.4e-31 Score=239.93 Aligned_cols=211 Identities=25% Similarity=0.435 Sum_probs=184.3
Q ss_pred CCcEEEecCCCceeEEEecCCCCceEEEEeCCCcEEEEeCCCCCCCCcccceeeeecCCccEeeEEEecCCCcEEEEEeC
Q 014454 169 SPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGD 248 (424)
Q Consensus 169 ~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~ 248 (424)
.....+.+|...|++++|+|++. +|++|+.||.|++|++.++. ....+.+|...|.+++|+|++. +|++++.
T Consensus 14 ~~~~~~~gh~~~v~~~~~s~~~~-~l~s~~~dg~i~iw~~~~~~------~~~~~~~h~~~v~~~~~~~~~~-~l~s~~~ 85 (312)
T 4ery_A 14 ALKFTLAGHTKAVSSVKFSPNGE-WLASSSADKLIKIWGAYDGK------FEKTISGHKLGISDVAWSSDSN-LLVSASD 85 (312)
T ss_dssp EEEEEECCCSSCEEEEEECTTSS-EEEEEETTSCEEEEETTTCC------EEEEECCCSSCEEEEEECTTSS-EEEEEET
T ss_pred eeEEEEcccCCcEEEEEECCCCC-EEEEeeCCCeEEEEeCCCcc------cchhhccCCCceEEEEEcCCCC-EEEEECC
Confidence 44567889999999999999887 89999999999999997653 3556778999999999999986 5679999
Q ss_pred CCeEEEEEcCCCCCCCCeeeeeccCCCeeEEEecCCCCeEEEEEeCCCcEEEEECCCCCCcceEecCCCCCEEEEEEcCC
Q 014454 249 DQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATGSTDKTVKLFDLRKISTALHTFDSHKEEVFQVGWNPK 328 (424)
Q Consensus 249 dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~~h~~~v~~~~~sp~ 328 (424)
||.|++||++++.. +..+..|...|.+++|+|++. +|++|+.||.|++||+++ ++.+..+..|..+|.+++|+|+
T Consensus 86 d~~i~vwd~~~~~~---~~~~~~~~~~v~~~~~~~~~~-~l~s~~~d~~i~iwd~~~-~~~~~~~~~~~~~v~~~~~~~~ 160 (312)
T 4ery_A 86 DKTLKIWDVSSGKC---LKTLKGHSNYVFCCNFNPQSN-LIVSGSFDESVRIWDVKT-GKCLKTLPAHSDPVSAVHFNRD 160 (312)
T ss_dssp TSEEEEEETTTCCE---EEEEECCSSCEEEEEECSSSS-EEEEEETTSCEEEEETTT-CCEEEEECCCSSCEEEEEECTT
T ss_pred CCEEEEEECCCCcE---EEEEcCCCCCEEEEEEcCCCC-EEEEEeCCCcEEEEECCC-CEEEEEecCCCCcEEEEEEcCC
Confidence 99999999998664 777889999999999999987 699999999999999998 6788899999999999999999
Q ss_pred CCcEEEEEECCCeEEEeeCCCCCcccCCCCcCCCCCeeeEE-EcCCCCCcceEEeCCCCCcEEEEEeCCCcEEEEecCCc
Q 014454 329 NETILASCCLGRRLMVWDLSRIDEEQTPEDAEDGPPELLFI-HGGHTSKISDFSWNPCEDWVISSVAEDNILQIWQMAEN 407 (424)
Q Consensus 329 ~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~-~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~ 407 (424)
+. +|++++.||.|++||++... .+.. ...+...+..++|+|+++ .|++++.||.|++||+.++
T Consensus 161 ~~-~l~~~~~d~~i~~wd~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~-~l~~~~~d~~i~iwd~~~~ 224 (312)
T 4ery_A 161 GS-LIVSSSYDGLCRIWDTASGQ--------------CLKTLIDDDNPPVSFVKFSPNGK-YILAATLDNTLKLWDYSKG 224 (312)
T ss_dssp SS-EEEEEETTSCEEEEETTTCC--------------EEEEECCSSCCCEEEEEECTTSS-EEEEEETTTEEEEEETTTT
T ss_pred CC-EEEEEeCCCcEEEEECCCCc--------------eeeEEeccCCCceEEEEECCCCC-EEEEEcCCCeEEEEECCCC
Confidence 86 79999999999999998753 2333 345667799999999999 6889999999999999876
Q ss_pred c
Q 014454 408 I 408 (424)
Q Consensus 408 ~ 408 (424)
.
T Consensus 225 ~ 225 (312)
T 4ery_A 225 K 225 (312)
T ss_dssp E
T ss_pred c
Confidence 4
No 93
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=100.00 E-value=6.7e-31 Score=280.58 Aligned_cols=267 Identities=20% Similarity=0.347 Sum_probs=216.5
Q ss_pred EeccCCceeEEEecCCCCcEEEEEeCCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCceeEEEecCCCC-ceEEEEeC
Q 014454 121 QINHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKE-GHLLSGSD 199 (424)
Q Consensus 121 ~~~h~~~v~~~~~~p~~~~~latg~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~-~~l~s~~~ 199 (424)
...|.+.|.+++|+|++. +||+|+.||.|+|||+.+ ......+.+|...|.+++|+|++. .++++|+.
T Consensus 653 ~~~h~~~v~~~~~s~~~~-~l~s~~~d~~v~vwd~~~----------~~~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~ 721 (1249)
T 3sfz_A 653 IKAHEDEVLCCAFSSDDS-YIATCSADKKVKIWDSAT----------GKLVHTYDEHSEQVNCCHFTNKSNHLLLATGSN 721 (1249)
T ss_dssp ECCCSSCEEEEEECTTSS-EEEEEETTSEEEEEETTT----------CCEEEEEECCSSCEEEEEECSSSSCCEEEEEET
T ss_pred eccCCCCEEEEEEecCCC-EEEEEeCCCeEEEEECCC----------CceEEEEcCCCCcEEEEEEecCCCceEEEEEeC
Confidence 347999999999999886 899999999999999987 466788899999999999999533 36899999
Q ss_pred CCcEEEEeCCCCCCCCcccceeeeecCCccEeeEEEecCCCcEEEEEeCCCeEEEEEcCCCCCCC---------------
Q 014454 200 DAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSK--------------- 264 (424)
Q Consensus 200 dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~dg~i~i~d~~~~~~~~--------------- 264 (424)
||.|++||+.++ .....+.+|...|++++|+|++. .+++++.||.|++||++++....
T Consensus 722 d~~v~vwd~~~~------~~~~~~~~h~~~v~~~~~sp~~~-~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~ 794 (1249)
T 3sfz_A 722 DFFLKLWDLNQK------ECRNTMFGHTNSVNHCRFSPDDE-LLASCSADGTLRLWDVRSANERKSINVKRFFLSSEDPP 794 (1249)
T ss_dssp TSCEEEEETTSS------SEEEEECCCSSCEEEEEECSSTT-EEEEEESSSEEEEEEGGGTEEEEEEECCCCC-------
T ss_pred CCeEEEEECCCc------chhheecCCCCCEEEEEEecCCC-EEEEEECCCeEEEEeCCCCcccceecccccccccCCcc
Confidence 999999999876 34566778999999999999987 56799999999999997642100
Q ss_pred ------------------------------------Ceee-eeccCCCeeEEEecCCCCeEEEEEeCCCcEEEEECCCCC
Q 014454 265 ------------------------------------PVQS-VVAHQSEVNCLAFNPFNEWILATGSTDKTVKLFDLRKIS 307 (424)
Q Consensus 265 ------------------------------------~~~~-~~~~~~~v~~v~~~~~~~~~l~tg~~dg~i~iwd~~~~~ 307 (424)
.+.. ..+|...|.+++|+|++. ++++|+.||.|++||+.+ +
T Consensus 795 ~~~~~~v~~~~~s~dg~~l~~~~~~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~-~l~~~~~dg~v~vwd~~~-~ 872 (1249)
T 3sfz_A 795 EDVEVIVKCCSWSADGDKIIVAAKNKVLLFDIHTSGLLAEIHTGHHSTIQYCDFSPYDH-LAVIALSQYCVELWNIDS-R 872 (1249)
T ss_dssp -CCCCCBCCCCBCTTSSEEEEEETTEEEEEETTTCCEEEEEECSSSSCCCEEEECSSTT-EEEEECSSSCEEEEETTT-T
T ss_pred ccccceEEEEEECCCCCEEEEEcCCcEEEEEecCCCceeEEcCCCCCceEEEEEcCCCC-EEEEEeCCCeEEEEEcCC-C
Confidence 0011 126788999999999988 699999999999999998 7
Q ss_pred CcceEecCCCCCEEEEEEcCCCCcEEEEEECCCeEEEeeCCCCCcccC--------------------------------
Q 014454 308 TALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQT-------------------------------- 355 (424)
Q Consensus 308 ~~~~~~~~h~~~v~~~~~sp~~~~~l~s~~~dg~i~iwd~~~~~~~~~-------------------------------- 355 (424)
..+..+.+|...|.+++|+|++. +|++++.||.|++|++........
T Consensus 873 ~~~~~~~~h~~~v~~v~~spdg~-~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 951 (1249)
T 3sfz_A 873 LKVADCRGHLSWVHGVMFSPDGS-SFLTASDDQTIRVWETKKVCKNSAIVLKQEIDVVFQENETMVLAVDNIRGLQLIAG 951 (1249)
T ss_dssp EEEEEECCCSSCEEEEEECTTSS-EEEEEETTSCEEEEEHHHHHSCCSSSEEEEEEEEEETTEEEEEEEESSSSEEEEEE
T ss_pred ceeeecCCCccceEEEEECCCCC-EEEEEeCCCeEEEEEccccceeeeecccceeeEEEcCCCcEEEEecCCcceEEEec
Confidence 88889999999999999999996 799999999999999753210000
Q ss_pred -------------------CC------CcCC--------CCCeeeEEEcCCCCCcceEEeCCCCCcEEEEEeCCCcEEEE
Q 014454 356 -------------------PE------DAED--------GPPELLFIHGGHTSKISDFSWNPCEDWVISSVAEDNILQIW 402 (424)
Q Consensus 356 -------------------~~------~~~~--------~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~vw 402 (424)
.. ...+ ........+.+|...|++++|+|+++ .|++++.||.|++|
T Consensus 952 ~~~~~~~~~~~~i~~~~~sp~g~~l~~g~~~g~i~i~d~~~~~~~~~~~~h~~~v~~l~~s~dg~-~l~s~~~dg~i~vw 1030 (1249)
T 3sfz_A 952 KTGQIDYLPEAQVSCCCLSPHLEYVAFGDEDGAIKIIELPNNRVFSSGVGHKKAVRHIQFTADGK-TLISSSEDSVIQVW 1030 (1249)
T ss_dssp SSCCEEEECCSCEEEEEECTTSSEEEEEETTSCCEEEETTTTSCEEECCCCSSCCCCEEECSSSS-CEEEECSSSBEEEE
T ss_pred CcceEEEcccCcEEEEEEcCCCCEEEEEcCCCCEEEEEcCCCceeeecccCCCceEEEEECCCCC-EEEEEcCCCEEEEE
Confidence 00 0000 11234455678999999999999999 58999999999999
Q ss_pred ecCCccC
Q 014454 403 QMAENIY 409 (424)
Q Consensus 403 ~~~~~~~ 409 (424)
++.++..
T Consensus 1031 d~~~~~~ 1037 (1249)
T 3sfz_A 1031 NWQTGDY 1037 (1249)
T ss_dssp ETTTTEE
T ss_pred ECCCCce
Confidence 9988754
No 94
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=100.00 E-value=2.5e-31 Score=263.11 Aligned_cols=253 Identities=17% Similarity=0.297 Sum_probs=211.7
Q ss_pred ccCCceeEEEecCCCCcEEEEEeCCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCc-eeEEEecC--CCCceEEEEeC
Q 014454 123 NHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTE-GYGLSWSK--FKEGHLLSGSD 199 (424)
Q Consensus 123 ~h~~~v~~~~~~p~~~~~latg~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~h~~~-v~~l~~~~--~~~~~l~s~~~ 199 (424)
.|.+.|.+++|+|+++ +||+++ ++.|+||++.+.. ........+.+|... |++++|+| ++. +|++|+.
T Consensus 16 ~~~~~v~~~~~spdg~-~l~~~~-~~~v~v~~~~~~~------~~~~~~~~~~~h~~~~v~~~~~sp~~~~~-~l~s~~~ 86 (615)
T 1pgu_A 16 TQRNFTTHLSYDPTTN-AIAYPC-GKSAFVRCLDDGD------SKVPPVVQFTGHGSSVVTTVKFSPIKGSQ-YLCSGDE 86 (615)
T ss_dssp CCTTCCCCCEEETTTT-EEEEEE-TTEEEEEECCSSC------CSSCSEEEECTTTTSCEEEEEECSSTTCC-EEEEEET
T ss_pred CccCceeEEEECCCCC-EEEEec-CCeEEEEECCCCC------CccccceEEecCCCceEEEEEECcCCCCC-EEEEecC
Confidence 5889999999999997 777777 8899999998610 011567889999999 99999999 887 8999999
Q ss_pred CCcEEEEeCCCCCCCC--cccceeeeecCCccEeeEEEecCCCcEEEEEeCC----CeEEEEEcCCCCCCCCeeeeeccC
Q 014454 200 DAQICLWDINAAPKNK--SLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDD----QYLLIWDLRTPSVSKPVQSVVAHQ 273 (424)
Q Consensus 200 dg~i~iwd~~~~~~~~--~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~d----g~i~i~d~~~~~~~~~~~~~~~~~ 273 (424)
||.|++||+.++.... .......+..|...|.+++|+|++..+ ++++.+ +.|++||. +. .+..+..|.
T Consensus 87 dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l-~~~~~~~~~~~~v~~~d~--~~---~~~~~~~~~ 160 (615)
T 1pgu_A 87 SGKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRL-CVVGEGRDNFGVFISWDS--GN---SLGEVSGHS 160 (615)
T ss_dssp TSEEEEEEEEEEGGGTEEEEEEEEEEECCSSCEEEEEECTTSSEE-EEEECCSSCSEEEEETTT--CC---EEEECCSCS
T ss_pred CCEEEEEeCCCCcccccccccccchhhcccccEEEEEEeCCCCEE-EEeccCCCCccEEEEEEC--CC---cceeeecCC
Confidence 9999999996431100 113455677899999999999999755 577766 78999983 22 467778899
Q ss_pred CCeeEEEecCCCCeEEEEEeCCCcEEEEECCCCCCcceEecCCCC---CEEEEEEcCC-CCcEEEEEECCCeEEEeeCCC
Q 014454 274 SEVNCLAFNPFNEWILATGSTDKTVKLFDLRKISTALHTFDSHKE---EVFQVGWNPK-NETILASCCLGRRLMVWDLSR 349 (424)
Q Consensus 274 ~~v~~v~~~~~~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~~h~~---~v~~~~~sp~-~~~~l~s~~~dg~i~iwd~~~ 349 (424)
..|++++|+|+++.++++++.|+.|++||++. .+.+..+..|.. .|.+++|+|+ +. +|++++.||.|++||++.
T Consensus 161 ~~v~~~~~~~~~~~~l~~~~~d~~v~vwd~~~-~~~~~~~~~~~~~~~~v~~~~~~~~~~~-~l~~~~~dg~i~vwd~~~ 238 (615)
T 1pgu_A 161 QRINACHLKQSRPMRSMTVGDDGSVVFYQGPP-FKFSASDRTHHKQGSFVRDVEFSPDSGE-FVITVGSDRKISCFDGKS 238 (615)
T ss_dssp SCEEEEEECSSSSCEEEEEETTTEEEEEETTT-BEEEEEECSSSCTTCCEEEEEECSTTCC-EEEEEETTCCEEEEETTT
T ss_pred ccEEEEEECCCCCcEEEEEeCCCcEEEEeCCC-cceeeeecccCCCCceEEEEEECCCCCC-EEEEEeCCCeEEEEECCC
Confidence 99999999999987899999999999999987 678889999999 9999999999 75 799999999999999987
Q ss_pred CCcccCCCCcCCCCCeeeEEE-c---CCCCCcceEEeCCCCCcEEEEEeCCCcEEEEecCCcc
Q 014454 350 IDEEQTPEDAEDGPPELLFIH-G---GHTSKISDFSWNPCEDWVISSVAEDNILQIWQMAENI 408 (424)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~~~-~---~h~~~v~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~ 408 (424)
+ ..+..+ . +|...|.+++|+ ++. +|++++.|+.|++|++.++.
T Consensus 239 ~--------------~~~~~~~~~~~~~~~~v~~~~~~-~~~-~l~~~~~d~~i~~wd~~~~~ 285 (615)
T 1pgu_A 239 G--------------EFLKYIEDDQEPVQGGIFALSWL-DSQ-KFATVGADATIRVWDVTTSK 285 (615)
T ss_dssp C--------------CEEEECCBTTBCCCSCEEEEEES-SSS-EEEEEETTSEEEEEETTTTE
T ss_pred C--------------CEeEEecccccccCCceEEEEEc-CCC-EEEEEcCCCcEEEEECCCCc
Confidence 5 445555 5 899999999999 888 79999999999999998764
No 95
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=100.00 E-value=1.3e-30 Score=247.30 Aligned_cols=238 Identities=18% Similarity=0.362 Sum_probs=203.5
Q ss_pred eccCCceeEEEecCCCCcEEEEEeCCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCceeEEEecCCCCceEEEEeCCC
Q 014454 122 INHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDDA 201 (424)
Q Consensus 122 ~~h~~~v~~~~~~p~~~~~latg~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg 201 (424)
..|...|.++++ ++. ++++|+.||.|++||+.+ ......+.+|...|.+++| ++. +|++|+.||
T Consensus 130 ~~~~~~v~~~~~--d~~-~l~~g~~dg~i~iwd~~~----------~~~~~~~~~h~~~v~~l~~--~~~-~l~sg~~dg 193 (435)
T 1p22_A 130 SETSKGVYCLQY--DDQ-KIVSGLRDNTIKIWDKNT----------LECKRILTGHTGSVLCLQY--DER-VIITGSSDS 193 (435)
T ss_dssp CSSCCCEEEEEC--CSS-EEEEEESSSCEEEEESSS----------CCEEEEECCCSSCEEEEEC--CSS-EEEEEETTS
T ss_pred cCCCCcEEEEEE--CCC-EEEEEeCCCeEEEEeCCC----------CeEEEEEcCCCCcEEEEEE--CCC-EEEEEcCCC
Confidence 356778999888 454 899999999999999987 4567788899999999999 344 899999999
Q ss_pred cEEEEeCCCCCCCCcccceeeeecCCccEeeEEEecCCCcEEEEEeCCCeEEEEEcCCCCCCCCeeeeeccCCCeeEEEe
Q 014454 202 QICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAF 281 (424)
Q Consensus 202 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~v~~ 281 (424)
.|++||+.++. .+..+.+|...|.+++|++ ..+++|+.||.|++||++++........+.+|...|.+++|
T Consensus 194 ~i~vwd~~~~~------~~~~~~~h~~~v~~l~~~~---~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~ 264 (435)
T 1p22_A 194 TVRVWDVNTGE------MLNTLIHHCEAVLHLRFNN---GMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDF 264 (435)
T ss_dssp CEEEEESSSCC------EEEEECCCCSCEEEEECCT---TEEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEE
T ss_pred eEEEEECCCCc------EEEEEcCCCCcEEEEEEcC---CEEEEeeCCCcEEEEeCCCCCCceeeeEecCCCCcEEEEEe
Confidence 99999998763 4566778999999999974 36789999999999999987653333667789999999999
Q ss_pred cCCCCeEEEEEeCCCcEEEEECCCCCCcceEecCCCCCEEEEEEcCCCCcEEEEEECCCeEEEeeCCCCCcccCCCCcCC
Q 014454 282 NPFNEWILATGSTDKTVKLFDLRKISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPEDAED 361 (424)
Q Consensus 282 ~~~~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~ 361 (424)
++. +|++|+.||.|++||+++ +.++..+..|...|.+++|+ + .++++|+.||.|++||++++
T Consensus 265 --~~~-~l~s~~~dg~i~vwd~~~-~~~~~~~~~~~~~v~~~~~~--~-~~l~~g~~dg~i~iwd~~~~----------- 326 (435)
T 1p22_A 265 --DDK-YIVSASGDRTIKVWNTST-CEFVRTLNGHKRGIACLQYR--D-RLVVSGSSDNTIRLWDIECG----------- 326 (435)
T ss_dssp --ETT-EEEEEETTSEEEEEETTT-CCEEEEEECCSSCEEEEEEE--T-TEEEEEETTSCEEEEETTTC-----------
T ss_pred --CCC-EEEEEeCCCeEEEEECCc-CcEEEEEcCCCCcEEEEEeC--C-CEEEEEeCCCeEEEEECCCC-----------
Confidence 355 699999999999999998 68889999999999999995 3 47999999999999999875
Q ss_pred CCCeeeEEEcCCCCCcceEEeCCCCCcEEEEEeCCCcEEEEecCCcc
Q 014454 362 GPPELLFIHGGHTSKISDFSWNPCEDWVISSVAEDNILQIWQMAENI 408 (424)
Q Consensus 362 ~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~ 408 (424)
.++..+.+|...|.+++| ++. +|++++.||.|++||+..+.
T Consensus 327 ---~~~~~~~~h~~~v~~~~~--~~~-~l~sg~~dg~i~vwd~~~~~ 367 (435)
T 1p22_A 327 ---ACLRVLEGHEELVRCIRF--DNK-RIVSGAYDGKIKVWDLVAAL 367 (435)
T ss_dssp ---CEEEEECCCSSCEEEEEC--CSS-EEEEEETTSCEEEEEHHHHT
T ss_pred ---CEEEEEeCCcCcEEEEEe--cCC-EEEEEeCCCcEEEEECCCCC
Confidence 567788899999999999 566 79999999999999997654
No 96
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=6.5e-31 Score=269.63 Aligned_cols=264 Identities=13% Similarity=0.140 Sum_probs=199.5
Q ss_pred cEEEEEEeccCCceeEEEecCCCCcEEEEEeCCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCceeEEEecCCCCceE
Q 014454 115 KVQIIQQINHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHL 194 (424)
Q Consensus 115 ~~~~~~~~~h~~~v~~~~~~p~~~~~latg~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l 194 (424)
.+......+|.+.|++++|+|++. +||+|+.||.|+||+... ... .....|...|.+++|+| +. +|
T Consensus 7 ~~~~~~~~gh~~~V~~lafspdg~-~lAsgs~Dg~I~lw~~~~----------~~~-~~~~~~~~~V~~l~fsp-g~-~L 72 (902)
T 2oaj_A 7 SLAETNKYGMSSKPIAAAFDFTQN-LLAIATVTGEVHIYGQQQ----------VEV-VIKLEDRSAIKEMRFVK-GI-YL 72 (902)
T ss_dssp EEEEEEEEECSSCEEEEEEETTTT-EEEEEETTSEEEEECSTT----------CEE-EEECSSCCCEEEEEEET-TT-EE
T ss_pred eeccccccCCCCCcEEEEECCCCC-EEEEEeCCCEEEEEeCCC----------cEE-EEEcCCCCCEEEEEEcC-CC-EE
Confidence 355566779999999999999986 899999999999999865 222 22335788999999999 76 89
Q ss_pred EEEeCCCcEEEEeCCCCCCCCcccceeeeecCCccEeeEEEecCCCcEEEEEeCCCeEEEEEcCCCCCCCCe--------
Q 014454 195 LSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPV-------- 266 (424)
Q Consensus 195 ~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~dg~i~i~d~~~~~~~~~~-------- 266 (424)
++++.|++|++||+.+++ .+..+. |...|++++|+|++. .+++|+.||.|++||++++... ..
T Consensus 73 ~S~s~D~~v~lWd~~~~~------~~~~~~-~~~~V~~v~~sp~g~-~l~sgs~dg~V~lwd~~~~~~~-~~~i~~~~~~ 143 (902)
T 2oaj_A 73 VVINAKDTVYVLSLYSQK------VLTTVF-VPGKITSIDTDASLD-WMLIGLQNGSMIVYDIDRDQLS-SFKLDNLQKS 143 (902)
T ss_dssp EEEETTCEEEEEETTTCS------EEEEEE-CSSCEEEEECCTTCS-EEEEEETTSCEEEEETTTTEEE-EEEECCHHHH
T ss_pred EEEECcCeEEEEECCCCc------EEEEEc-CCCCEEEEEECCCCC-EEEEEcCCCcEEEEECCCCccc-cceecccccc
Confidence 999999999999998763 334443 678999999999987 5569999999999999876521 00
Q ss_pred -eeeeccCCCeeEEEecCCCCeEEEEEeCCCcEEEEECCCCCCcceEecCC------------------CCCEEEEEEcC
Q 014454 267 -QSVVAHQSEVNCLAFNPFNEWILATGSTDKTVKLFDLRKISTALHTFDSH------------------KEEVFQVGWNP 327 (424)
Q Consensus 267 -~~~~~~~~~v~~v~~~~~~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~~h------------------~~~v~~~~~sp 327 (424)
....+|..+|++++|+|++..+|++|+.||.| +||+++ .+++..+..| ...|++++|+|
T Consensus 144 ~~~~~~h~~~V~sl~~sp~~~~~l~~g~~dg~v-lWd~~~-~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fsp 221 (902)
T 2oaj_A 144 SFFPAARLSPIVSIQWNPRDIGTVLISYEYVTL-TYSLVE-NEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHP 221 (902)
T ss_dssp HTCSSSCCCCCCEEEEETTEEEEEEEECSSCEE-EEETTT-TEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECT
T ss_pred ccccccCCCCeEEEEEccCCCCEEEEEeCCCcE-EEECCC-CceEEEEecccCCcCCCcccccccccccCCCeEEEEEcC
Confidence 22356889999999999765689999999999 999998 6777777655 57899999999
Q ss_pred CCCcEEEEEECCCeEEEeeCCCCCcccC--CCCcC-CCCC-eeeEEEcCCCCCcceEEeC----CCCCcEEEEEeCC---
Q 014454 328 KNETILASCCLGRRLMVWDLSRIDEEQT--PEDAE-DGPP-ELLFIHGGHTSKISDFSWN----PCEDWVISSVAED--- 396 (424)
Q Consensus 328 ~~~~~l~s~~~dg~i~iwd~~~~~~~~~--~~~~~-~~~~-~~~~~~~~h~~~v~~~~~~----~~~~~~l~s~~~d--- 396 (424)
++. +|++++.||.|++||++++..... ..... ..+. ........|...|++++|+ |++..+|++++.|
T Consensus 222 dg~-~lasgs~Dg~i~lWd~~~g~~~~~r~l~~~~~~~~~~~~~~~~~~~~~~V~~v~w~~~~~pd~~~ll~sg~~~~~~ 300 (902)
T 2oaj_A 222 NSL-HIITIHEDNSLVFWDANSGHMIMARTVFETEINVPQPDYIRDSSTNAAKISKVYWMCENNPEYTSLLISHKSISRG 300 (902)
T ss_dssp TSS-EEEEEETTCCEEEEETTTCCEEEEECSSCSCTTSCCTTCCCCCSSCCCEEEEEEEEECSSTTEEEEEEEEECSTTS
T ss_pred CCC-EEEEEECCCeEEEEECCCCcEEEEEeecccccCCCCCcCCCCCccccCCeeEEEEEecCCCCCCEEEEeCCCCCCC
Confidence 985 899999999999999987643211 00000 0000 0000000245579999995 5554578888766
Q ss_pred --CcEEEEec
Q 014454 397 --NILQIWQM 404 (424)
Q Consensus 397 --g~i~vw~~ 404 (424)
+.+++|++
T Consensus 301 ~~~~v~~~~~ 310 (902)
T 2oaj_A 301 DNQSLTMIDL 310 (902)
T ss_dssp SCCCEEEEEE
T ss_pred CCceEEEEec
Confidence 37889985
No 97
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=100.00 E-value=2.5e-30 Score=242.61 Aligned_cols=312 Identities=17% Similarity=0.214 Sum_probs=204.3
Q ss_pred HHHHhHHhcChhHHHHhhhcCCCCCccEEEEcc-CCCCCCCCCCceEEEEEeecCCCCCCCeEEEEEEECCCCCCCcccC
Q 014454 19 EEYKIWKKNTPFLYDLVITHALEWPSLTVEWLP-DREEPPGKDYSVQKMILGTHTSENEPNYLMLAQVQLPLDDSENDAR 97 (424)
Q Consensus 19 ~~~~~wk~~~~~~y~~~~~~~~~~p~~~~~~~p-~~~~~~~~~~~~~~~~~gt~~~~~~~~~i~i~~~~~~~~~~~~~~~ 97 (424)
...++|..........+..|. -+..+++|.| +. ..++.|+ .+..|+++.+.-......
T Consensus 23 ~~~~v~~~~~~~~~~~~~~h~--~~v~~~~~s~~~~----------~~l~~~~-----~dg~i~iw~~~~~~~~~~---- 81 (408)
T 4a11_B 23 STRRVLGLELNKDRDVERIHG--GGINTLDIEPVEG----------RYMLSGG-----SDGVIVLYDLENSSRQSY---- 81 (408)
T ss_dssp HHHHHHTEEECTTEEECCCCS--SCEEEEEECTTTC----------CEEEEEE-----TTSCEEEEECCCCSSSSC----
T ss_pred CcceeeccccCcceeeeeccC--CcEEEEEEecCCC----------CEEEEEc-----CCCeEEEEECCCCcccce----
Confidence 345666544433333333333 3578999999 54 4566665 345688887642110000
Q ss_pred CCCCcCCCCCCCCCCCCcEEEEEE------eccCCceeEEEecCCCCcEEEEEeCCCeEEEEeCCCCCCCCCCCCCCCCc
Q 014454 98 HYDDDRSDFGGFGCANGKVQIIQQ------INHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPD 171 (424)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~------~~h~~~v~~~~~~p~~~~~latg~~dg~v~iw~~~~~~~~~~~~~~~~~~ 171 (424)
........ ..|.+.|.+++|+|++..+|++++.||.|++||+.. ....
T Consensus 82 ----------------~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~----------~~~~ 135 (408)
T 4a11_B 82 ----------------YTCKAVCSIGRDHPDVHRYSVETVQWYPHDTGMFTSSSFDKTLKVWDTNT----------LQTA 135 (408)
T ss_dssp ----------------EEECEEEEECTTCTTCCSSCEEEEEECTTCTTCEEEEETTSEEEEEETTT----------TEEE
T ss_pred ----------------EeccccccccccccccCCCcEEEEEEccCCCcEEEEEeCCCeEEEeeCCC----------Cccc
Confidence 00000111 148999999999996656899999999999999987 2333
Q ss_pred EEEecCCCceeEEEecCCCCc--eEEEEeCCCcEEEEeCCCCCCCCcccceeeeecCCccEeeEEEecCCCcEEEEEeCC
Q 014454 172 LRLRGHSTEGYGLSWSKFKEG--HLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDD 249 (424)
Q Consensus 172 ~~~~~h~~~v~~l~~~~~~~~--~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~d 249 (424)
..+ .+...+.++.|++.+.. ++++++.||.|++||++++. .+..+..|...|.+++|+|++..+|++++.|
T Consensus 136 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~------~~~~~~~~~~~v~~~~~~~~~~~ll~~~~~d 208 (408)
T 4a11_B 136 DVF-NFEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGS------CSHILQGHRQEILAVSWSPRYDYILATASAD 208 (408)
T ss_dssp EEE-ECSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSSSC------CCEEECCCCSCEEEEEECSSCTTEEEEEETT
T ss_pred eec-cCCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCcc------eeeeecCCCCcEEEEEECCCCCcEEEEEcCC
Confidence 334 47888999999986432 79999999999999998763 3455677999999999999998888899999
Q ss_pred CeEEEEEcCCCCCCCCeeee---------------eccCCCeeEEEecCCCCeEEEEEeCCCcEEEEECCCCC-------
Q 014454 250 QYLLIWDLRTPSVSKPVQSV---------------VAHQSEVNCLAFNPFNEWILATGSTDKTVKLFDLRKIS------- 307 (424)
Q Consensus 250 g~i~i~d~~~~~~~~~~~~~---------------~~~~~~v~~v~~~~~~~~~l~tg~~dg~i~iwd~~~~~------- 307 (424)
|.|++||++.... .+..+ ..|...|++++|+|++. +|++++.||.|++||+++..
T Consensus 209 g~i~i~d~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~dg~i~vwd~~~~~~~~~~~~ 285 (408)
T 4a11_B 209 SRVKLWDVRRASG--CLITLDQHNGKKSQAVESANTAHNGKVNGLCFTSDGL-HLLTVGTDNRMRLWNSSNGENTLVNYG 285 (408)
T ss_dssp SCEEEEETTCSSC--CSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECTTSS-EEEEEETTSCEEEEETTTCCBCCCCCC
T ss_pred CcEEEEECCCCCc--ccccccccccccceeeccccccccCceeEEEEcCCCC-EEEEecCCCeEEEEECCCCccceeccc
Confidence 9999999987642 12222 56889999999999988 69999999999999987632
Q ss_pred ---------------------------------------CcceEecCCCCCEEEEEEcCCCCcEEEEEECCCeEEEeeCC
Q 014454 308 ---------------------------------------TALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLS 348 (424)
Q Consensus 308 ---------------------------------------~~~~~~~~h~~~v~~~~~sp~~~~~l~s~~~dg~i~iwd~~ 348 (424)
.++..+.+|...|++++|+|++. +|++++.||.|++||+.
T Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~v~~~~~s~~~~-~l~s~~~dg~i~iw~~~ 364 (408)
T 4a11_B 286 KVCNNSKKGLKFTVSCGCSSEFVFVPYGSTIAVYTVYSGEQITMLKGHYKTVDCCVFQSNFQ-ELYSGSRDCNILAWVPS 364 (408)
T ss_dssp CCCCCCSSCCCCEECCSSSSCEEEEEETTEEEEEETTTCCEEEEECCCSSCEEEEEEETTTT-EEEEEETTSCEEEEEEC
T ss_pred cccccccccceeEEecCCCceEEEEecCCEEEEEECcCCcceeeeccCCCeEEEEEEcCCCC-EEEEECCCCeEEEEeCC
Confidence 33556678999999999999995 79999999999999998
Q ss_pred CCCcccCCCCcCCCCCeeeEEEcCCCCCcceEEeCCCCCcEEEEEeCCCcEEEEecC
Q 014454 349 RIDEEQTPEDAEDGPPELLFIHGGHTSKISDFSWNPCEDWVISSVAEDNILQIWQMA 405 (424)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~vw~~~ 405 (424)
..... .....+ .....+.+.....+.+.+.++.+++|+..
T Consensus 365 ~~~~~--------------~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~W~~~ 404 (408)
T 4a11_B 365 LYEPV--------------PDDDET---TTKSQLNPAFEDAWSSSDEEGGTSAWSHP 404 (408)
T ss_dssp C--------------------------------------------------------
T ss_pred CCCcc--------------CCCCce---EeccccccccceeecccCccCceeecCCc
Confidence 75421 111111 12233444444356677889999999864
No 98
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=100.00 E-value=1.8e-30 Score=257.03 Aligned_cols=253 Identities=15% Similarity=0.224 Sum_probs=209.0
Q ss_pred EEeccCCc-eeEEEecC--CCCcEEEEEeCCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCceeEEEecCCCCceEEE
Q 014454 120 QQINHDGE-VNRARYMP--QNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLS 196 (424)
Q Consensus 120 ~~~~h~~~-v~~~~~~p--~~~~~latg~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s 196 (424)
....|.+. |++++|+| ++. +||+|+.||.|+||++....... .........+..|...|.+++|+|++. +|++
T Consensus 58 ~~~~h~~~~v~~~~~sp~~~~~-~l~s~~~dg~v~vw~~~~~~~~~--~~~~~~~~~~~~~~~~v~~~~~s~~~~-~l~~ 133 (615)
T 1pgu_A 58 QFTGHGSSVVTTVKFSPIKGSQ-YLCSGDESGKVIVWGWTFDKESN--SVEVNVKSEFQVLAGPISDISWDFEGR-RLCV 133 (615)
T ss_dssp EECTTTTSCEEEEEECSSTTCC-EEEEEETTSEEEEEEEEEEGGGT--EEEEEEEEEEECCSSCEEEEEECTTSS-EEEE
T ss_pred EEecCCCceEEEEEECcCCCCC-EEEEecCCCEEEEEeCCCCcccc--cccccccchhhcccccEEEEEEeCCCC-EEEE
Confidence 34579999 99999999 886 89999999999999996410000 001344567788999999999999988 7888
Q ss_pred EeCC----CcEEEEeCCCCCCCCcccceeeeecCCccEeeEEEecCCCcEEEEEeCCCeEEEEEcCCCCCCCCeeeeecc
Q 014454 197 GSDD----AQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAH 272 (424)
Q Consensus 197 ~~~d----g~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~dg~i~i~d~~~~~~~~~~~~~~~~ 272 (424)
++.+ +.|.+||.. ..+..+.+|...|.+++|+|+++.++++++.|+.|++||+++.+ .+..+..|
T Consensus 134 ~~~~~~~~~~v~~~d~~--------~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~---~~~~~~~~ 202 (615)
T 1pgu_A 134 VGEGRDNFGVFISWDSG--------NSLGEVSGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPFK---FSASDRTH 202 (615)
T ss_dssp EECCSSCSEEEEETTTC--------CEEEECCSCSSCEEEEEECSSSSCEEEEEETTTEEEEEETTTBE---EEEEECSS
T ss_pred eccCCCCccEEEEEECC--------CcceeeecCCccEEEEEECCCCCcEEEEEeCCCcEEEEeCCCcc---eeeeeccc
Confidence 8887 789999842 24566778999999999999998788899999999999998865 36777788
Q ss_pred CC---CeeEEEecCC-CCeEEEEEeCCCcEEEEECCCCCCcceEe-c---CCCCCEEEEEEcCCCCcEEEEEECCCeEEE
Q 014454 273 QS---EVNCLAFNPF-NEWILATGSTDKTVKLFDLRKISTALHTF-D---SHKEEVFQVGWNPKNETILASCCLGRRLMV 344 (424)
Q Consensus 273 ~~---~v~~v~~~~~-~~~~l~tg~~dg~i~iwd~~~~~~~~~~~-~---~h~~~v~~~~~sp~~~~~l~s~~~dg~i~i 344 (424)
.. .|++++|+|+ +. +|++++.||.|++||+++ ++.+..+ . .|...|.+++|+ ++. +|++++.|+.|++
T Consensus 203 ~~~~~~v~~~~~~~~~~~-~l~~~~~dg~i~vwd~~~-~~~~~~~~~~~~~~~~~v~~~~~~-~~~-~l~~~~~d~~i~~ 278 (615)
T 1pgu_A 203 HKQGSFVRDVEFSPDSGE-FVITVGSDRKISCFDGKS-GEFLKYIEDDQEPVQGGIFALSWL-DSQ-KFATVGADATIRV 278 (615)
T ss_dssp SCTTCCEEEEEECSTTCC-EEEEEETTCCEEEEETTT-CCEEEECCBTTBCCCSCEEEEEES-SSS-EEEEEETTSEEEE
T ss_pred CCCCceEEEEEECCCCCC-EEEEEeCCCeEEEEECCC-CCEeEEecccccccCCceEEEEEc-CCC-EEEEEcCCCcEEE
Confidence 88 9999999999 76 699999999999999998 6777787 5 899999999999 774 7999999999999
Q ss_pred eeCCCCCcccCCCCcCCCCCeeeEEEcCC----CCCcceEEeCCCCCcEEEEEeCCCcEEEEecCCc
Q 014454 345 WDLSRIDEEQTPEDAEDGPPELLFIHGGH----TSKISDFSWNPCEDWVISSVAEDNILQIWQMAEN 407 (424)
Q Consensus 345 wd~~~~~~~~~~~~~~~~~~~~~~~~~~h----~~~v~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~ 407 (424)
||++.. ..+..+..+ ...+..+.|. ++. .+++++.||.|++|++.++
T Consensus 279 wd~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~-~~~-~l~~~~~~g~i~~~d~~~~ 329 (615)
T 1pgu_A 279 WDVTTS--------------KCVQKWTLDKQQLGNQQVGVVAT-GNG-RIISLSLDGTLNFYELGHD 329 (615)
T ss_dssp EETTTT--------------EEEEEEECCTTCGGGCEEEEEEE-ETT-EEEEEETTSCEEEEETTEE
T ss_pred EECCCC--------------cEEEEEcCCCCcccCceeEEEeC-CCC-eEEEEECCCCEEEEECCCC
Confidence 999875 445555554 3567788886 677 6889999999999999864
No 99
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.2e-29 Score=239.95 Aligned_cols=249 Identities=14% Similarity=0.131 Sum_probs=197.0
Q ss_pred ccCCceeEEEecCCCCcEEEEEeCCCeEEEEeCC--CCCCCCCCCCCCCCcEEEe--cCCCceeEEEecCCCCceEEEEe
Q 014454 123 NHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYS--KHPSKPPLDGACSPDLRLR--GHSTEGYGLSWSKFKEGHLLSGS 198 (424)
Q Consensus 123 ~h~~~v~~~~~~p~~~~~latg~~dg~v~iw~~~--~~~~~~~~~~~~~~~~~~~--~h~~~v~~l~~~~~~~~~l~s~~ 198 (424)
.|.+.|++++|+|+++.++|+|+.||.|+||++. . ......+. .|...|.+++|+|++. +|++|+
T Consensus 100 ~~~~~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~----------~~~~~~~~~~~~~~~v~~~~~sp~~~-~l~~~~ 168 (450)
T 2vdu_B 100 PIYSYIRNLRLTSDESRLIACADSDKSLLVFDVDKTS----------KNVLKLRKRFCFSKRPNAISIAEDDT-TVIIAD 168 (450)
T ss_dssp CCCCCEEEEEECTTSSEEEEEEGGGTEEEEEEECSSS----------SSCEEEEEEEECSSCEEEEEECTTSS-EEEEEE
T ss_pred ccCCceEEEEEcCCCCEEEEEECCCCeEEEEECcCCC----------CceeeeeecccCCCCceEEEEcCCCC-EEEEEe
Confidence 5778999999999998656999999999999998 4 34445554 6778999999999887 799999
Q ss_pred CCCcEEEEeCCCCCCCCcccceeeeecCCccEeeEEEecC---CCcEEEEEeCCCeEEEEEcCCCCCCCCeee-eeccCC
Q 014454 199 DDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLR---HEYLFGSVGDDQYLLIWDLRTPSVSKPVQS-VVAHQS 274 (424)
Q Consensus 199 ~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~---~~~~~~s~~~dg~i~i~d~~~~~~~~~~~~-~~~~~~ 274 (424)
.+|.|++|++........ ....+.+|...|++++|+|+ +. +|++++.|+.|++||++++.. +.. +.+|..
T Consensus 169 ~~g~v~~~~~~~~~~~~~--~~~~~~~h~~~v~~~~~sp~~~~~~-~l~s~~~d~~i~vwd~~~~~~---~~~~~~~h~~ 242 (450)
T 2vdu_B 169 KFGDVYSIDINSIPEEKF--TQEPILGHVSMLTDVHLIKDSDGHQ-FIITSDRDEHIKISHYPQCFI---VDKWLFGHKH 242 (450)
T ss_dssp TTSEEEEEETTSCCCSSC--CCCCSEECSSCEEEEEEEECTTSCE-EEEEEETTSCEEEEEESCTTC---EEEECCCCSS
T ss_pred CCCcEEEEecCCcccccc--cceeeecccCceEEEEEcCCCCCCc-EEEEEcCCCcEEEEECCCCce---eeeeecCCCC
Confidence 999999999987643220 23356779999999999998 64 667999999999999998664 554 458999
Q ss_pred CeeEEEecCCCCeEEEEEeCCCcEEEEECCCCCCcceEecC-------------------------CCCCEEEEEEcCCC
Q 014454 275 EVNCLAFNPFNEWILATGSTDKTVKLFDLRKISTALHTFDS-------------------------HKEEVFQVGWNPKN 329 (424)
Q Consensus 275 ~v~~v~~~~~~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~~-------------------------h~~~v~~~~~sp~~ 329 (424)
.|++++|+ ++. +|++|+.|+.|++||+++ ++++..+.. ....|.+++|+|++
T Consensus 243 ~v~~~~~s-d~~-~l~s~~~d~~v~vwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~ 319 (450)
T 2vdu_B 243 FVSSICCG-KDY-LLLSAGGDDKIFAWDWKT-GKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSKNL 319 (450)
T ss_dssp CEEEEEEC-STT-EEEEEESSSEEEEEETTT-CCEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEECSSS
T ss_pred ceEEEEEC-CCC-EEEEEeCCCeEEEEECCC-CcEeeeecchhhhhhhhhhcccccccccccccccceEEEEEEEEeCCC
Confidence 99999999 787 699999999999999998 566666642 23579999999999
Q ss_pred CcEEEEEE-CCCeEEEeeC--CCCCcccCCCCcCCCCCeeeEEEcCCCCCcceEEeCCCCCcEEEEEeC-------CCcE
Q 014454 330 ETILASCC-LGRRLMVWDL--SRIDEEQTPEDAEDGPPELLFIHGGHTSKISDFSWNPCEDWVISSVAE-------DNIL 399 (424)
Q Consensus 330 ~~~l~s~~-~dg~i~iwd~--~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~-------dg~i 399 (424)
+ +|++++ .|+.|+||++ .... ....+..+.+| ..|.+++|+|+ . ++++.+. ++.|
T Consensus 320 ~-~l~~~~~~d~~i~iw~~~~~~~~-----------~l~~~~~~~~~-~~v~~~~~~~~-~-~~v~~~~~~~~~~~~~~i 384 (450)
T 2vdu_B 320 P-FVAFFVEATKCIIILEMSEKQKG-----------DLALKQIITFP-YNVISLSAHND-E-FQVTLDNKESSGVQKNFA 384 (450)
T ss_dssp S-EEEEEETTCSEEEEEEECSSSTT-----------CEEEEEEEECS-SCEEEEEEETT-E-EEEEECCTTCCSSCCCSE
T ss_pred C-EEEEEECCCCeEEEEEeccCCCC-----------ceeeccEeccC-CceEEEEecCC-c-EEEEEecccCCCCCCcce
Confidence 6 577777 8999999999 3211 12455666777 78999999995 3 4554432 5568
Q ss_pred EEEecCC
Q 014454 400 QIWQMAE 406 (424)
Q Consensus 400 ~vw~~~~ 406 (424)
.+|.+..
T Consensus 385 ~v~~~~~ 391 (450)
T 2vdu_B 385 KFIEYNL 391 (450)
T ss_dssp EEEEEET
T ss_pred EEEEEEc
Confidence 8887753
No 100
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.7e-30 Score=266.51 Aligned_cols=243 Identities=12% Similarity=0.164 Sum_probs=181.5
Q ss_pred CCCccEEEEccCCCCCCCCCCceEEEEEeecCCCCCCCeEEEEEEECCCCCCCcccCCCCCcCCCCCCCCCCCCcEEEEE
Q 014454 41 EWPSLTVEWLPDREEPPGKDYSVQKMILGTHTSENEPNYLMLAQVQLPLDDSENDARHYDDDRSDFGGFGCANGKVQIIQ 120 (424)
Q Consensus 41 ~~p~~~~~~~p~~~~~~~~~~~~~~~~~gt~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 120 (424)
.-+..+++|.|+. ..++.|+ .+..|+++.. . ..+...
T Consensus 17 ~~~V~~lafspdg----------~~lAsgs-----~Dg~I~lw~~--~--------------------------~~~~~~ 53 (902)
T 2oaj_A 17 SSKPIAAAFDFTQ----------NLLAIAT-----VTGEVHIYGQ--Q--------------------------QVEVVI 53 (902)
T ss_dssp SSCEEEEEEETTT----------TEEEEEE-----TTSEEEEECS--T--------------------------TCEEEE
T ss_pred CCCcEEEEECCCC----------CEEEEEe-----CCCEEEEEeC--C--------------------------CcEEEE
Confidence 4456789999986 4566666 3456777632 1 122344
Q ss_pred EeccCCceeEEEecCCCCcEEEEEeCCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCceeEEEecCCCCceEEEEeCC
Q 014454 121 QINHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDD 200 (424)
Q Consensus 121 ~~~h~~~v~~~~~~p~~~~~latg~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~d 200 (424)
.+.|...|.+++|+| +. +||+++.|++|+|||+.+ ......+. |...|++++|+|++. +|++|+.|
T Consensus 54 ~~~~~~~V~~l~fsp-g~-~L~S~s~D~~v~lWd~~~----------~~~~~~~~-~~~~V~~v~~sp~g~-~l~sgs~d 119 (902)
T 2oaj_A 54 KLEDRSAIKEMRFVK-GI-YLVVINAKDTVYVLSLYS----------QKVLTTVF-VPGKITSIDTDASLD-WMLIGLQN 119 (902)
T ss_dssp ECSSCCCEEEEEEET-TT-EEEEEETTCEEEEEETTT----------CSEEEEEE-CSSCEEEEECCTTCS-EEEEEETT
T ss_pred EcCCCCCEEEEEEcC-CC-EEEEEECcCeEEEEECCC----------CcEEEEEc-CCCCEEEEEECCCCC-EEEEEcCC
Confidence 567889999999999 76 899999999999999987 34445554 778999999999887 79999999
Q ss_pred CcEEEEeCCCCCCCCcccc-----e-eeeecCCccEeeEEEecCCCcEEEEEeCCCeEEEEEcCCCCCCCCeeeeecc--
Q 014454 201 AQICLWDINAAPKNKSLEA-----M-QIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAH-- 272 (424)
Q Consensus 201 g~i~iwd~~~~~~~~~~~~-----~-~~~~~~~~~v~~~~~~~~~~~~~~s~~~dg~i~i~d~~~~~~~~~~~~~~~~-- 272 (424)
|.|++||+++.... .+.. . ..+.+|.+.|++++|+|++..++++|+.||.| +||++++.. +..+..|
T Consensus 120 g~V~lwd~~~~~~~-~~~i~~~~~~~~~~~~h~~~V~sl~~sp~~~~~l~~g~~dg~v-lWd~~~~~~---~~~~~~~~~ 194 (902)
T 2oaj_A 120 GSMIVYDIDRDQLS-SFKLDNLQKSSFFPAARLSPIVSIQWNPRDIGTVLISYEYVTL-TYSLVENEI---KQSFIYELP 194 (902)
T ss_dssp SCEEEEETTTTEEE-EEEECCHHHHHTCSSSCCCCCCEEEEETTEEEEEEEECSSCEE-EEETTTTEE---EEEECCCBC
T ss_pred CcEEEEECCCCccc-cceeccccccccccccCCCCeEEEEEccCCCCEEEEEeCCCcE-EEECCCCce---EEEEecccC
Confidence 99999999865321 0000 0 23467899999999999866678899999999 999998653 4444333
Q ss_pred ----------------CCCeeEEEecCCCCeEEEEEeCCCcEEEEECCCCCCcceE--e---cC-------------CCC
Q 014454 273 ----------------QSEVNCLAFNPFNEWILATGSTDKTVKLFDLRKISTALHT--F---DS-------------HKE 318 (424)
Q Consensus 273 ----------------~~~v~~v~~~~~~~~~l~tg~~dg~i~iwd~~~~~~~~~~--~---~~-------------h~~ 318 (424)
...|++++|+|++. +||+|+.||+|++||+++ ++++.. + .. |..
T Consensus 195 ~g~~~~~~~~~~~~~h~~~V~~v~fspdg~-~lasgs~Dg~i~lWd~~~-g~~~~~r~l~~~~~~~~~~~~~~~~~~~~~ 272 (902)
T 2oaj_A 195 PFAPGGDFSEKTNEKRTPKVIQSLYHPNSL-HIITIHEDNSLVFWDANS-GHMIMARTVFETEINVPQPDYIRDSSTNAA 272 (902)
T ss_dssp TTCCCSTTCCCTTSCBCCCEEEEEECTTSS-EEEEEETTCCEEEEETTT-CCEEEEECSSCSCTTSCCTTCCCCCSSCCC
T ss_pred CcCCCcccccccccccCCCeEEEEEcCCCC-EEEEEECCCeEEEEECCC-CcEEEEEeecccccCCCCCcCCCCCccccC
Confidence 57899999999988 699999999999999998 555442 2 11 345
Q ss_pred CEEEEEEc----CCCCcEEEEEECC-----CeEEEeeC
Q 014454 319 EVFQVGWN----PKNETILASCCLG-----RRLMVWDL 347 (424)
Q Consensus 319 ~v~~~~~s----p~~~~~l~s~~~d-----g~i~iwd~ 347 (424)
+|++++|+ |++..+|++|+.| ..+.+|++
T Consensus 273 ~V~~v~w~~~~~pd~~~ll~sg~~~~~~~~~~v~~~~~ 310 (902)
T 2oaj_A 273 KISKVYWMCENNPEYTSLLISHKSISRGDNQSLTMIDL 310 (902)
T ss_dssp EEEEEEEEECSSTTEEEEEEEEECSTTSSCCCEEEEEE
T ss_pred CeeEEEEEecCCCCCCEEEEeCCCCCCCCCceEEEEec
Confidence 79999995 4444577777665 26777773
No 101
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.1e-30 Score=245.86 Aligned_cols=266 Identities=12% Similarity=0.090 Sum_probs=191.2
Q ss_pred CCceeEEEecCCCCcEEEEEeCCCeEEEEeCCCCC---CCC----CCC--------------------------------
Q 014454 125 DGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHP---SKP----PLD-------------------------------- 165 (424)
Q Consensus 125 ~~~v~~~~~~p~~~~~latg~~dg~v~iw~~~~~~---~~~----~~~-------------------------------- 165 (424)
..++.+++|+|++. +|+++ .++.|++||+.+.. ... ...
T Consensus 4 ~~p~~~v~~s~dg~-~l~~~-~~~~i~v~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (450)
T 2vdu_B 4 IHPLQNLLTSRDGS-LVFAI-IKNCILSFKYQSPNHWEFAGKWSDDFDKIQESRNTTAKEQQGQSSENENENKKLKSNKG 81 (450)
T ss_dssp ECCCCEEEECSSSS-EEEEE-ETTEEEEEEEETTTEEEEEEEEECCC---------------------------------
T ss_pred cccEEEEEecCCCC-EEEEE-eCCeEEEEECCCCCcceeeeecCCccccccccccccchhhccccccccccccccccCcC
Confidence 35789999999997 56654 57899999986532 000 000
Q ss_pred --------CCCCCcEEEecCCCceeEEEecCCCCceEEEEeCCCcEEEEeCC--CCCCCCcccceeeee--cCCccEeeE
Q 014454 166 --------GACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDDAQICLWDIN--AAPKNKSLEAMQIFK--VHEGVVEDV 233 (424)
Q Consensus 166 --------~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~iwd~~--~~~~~~~~~~~~~~~--~~~~~v~~~ 233 (424)
....+.....+|...|.+++|+|++..++++|+.||.|++||+. ++. .+..+. .|...|.++
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~------~~~~~~~~~~~~~v~~~ 155 (450)
T 2vdu_B 82 DSIKRTAAKVPSPGLGAPPIYSYIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKN------VLKLRKRFCFSKRPNAI 155 (450)
T ss_dssp ------------------CCCCCEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSS------CEEEEEEEECSSCEEEE
T ss_pred ccccccCccccCCCCCCCccCCceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCc------eeeeeecccCCCCceEE
Confidence 00001112235666899999999998435899999999999998 442 233333 577899999
Q ss_pred EEecCCCcEEEEEeCCCeEEEEEcCCCCCCC-CeeeeeccCCCeeEEEecCC---CCeEEEEEeCCCcEEEEECCCCCCc
Q 014454 234 AWHLRHEYLFGSVGDDQYLLIWDLRTPSVSK-PVQSVVAHQSEVNCLAFNPF---NEWILATGSTDKTVKLFDLRKISTA 309 (424)
Q Consensus 234 ~~~~~~~~~~~s~~~dg~i~i~d~~~~~~~~-~~~~~~~~~~~v~~v~~~~~---~~~~l~tg~~dg~i~iwd~~~~~~~ 309 (424)
+|+|++. .|++++.+|.|++|++.+..... ....+.+|...|++++|+|+ +. +|++|+.|+.|++||+++ +..
T Consensus 156 ~~sp~~~-~l~~~~~~g~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~-~l~s~~~d~~i~vwd~~~-~~~ 232 (450)
T 2vdu_B 156 SIAEDDT-TVIIADKFGDVYSIDINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQ-FIITSDRDEHIKISHYPQ-CFI 232 (450)
T ss_dssp EECTTSS-EEEEEETTSEEEEEETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCE-EEEEEETTSCEEEEEESC-TTC
T ss_pred EEcCCCC-EEEEEeCCCcEEEEecCCcccccccceeeecccCceEEEEEcCCCCCCc-EEEEEcCCCcEEEEECCC-Cce
Confidence 9999987 55689999999999998876543 44466789999999999998 65 799999999999999998 566
Q ss_pred ceE-ecCCCCCEEEEEEcCCCCcEEEEEECCCeEEEeeCCCCCcccCCCCcC---------CCCCee--eEEEcCCCCCc
Q 014454 310 LHT-FDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPEDAE---------DGPPEL--LFIHGGHTSKI 377 (424)
Q Consensus 310 ~~~-~~~h~~~v~~~~~sp~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~---------~~~~~~--~~~~~~h~~~v 377 (424)
+.. +.+|...|.+++|+ ++. +|++++.|+.|++||++.+.......... ..++.. ......+...|
T Consensus 233 ~~~~~~~h~~~v~~~~~s-d~~-~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 310 (450)
T 2vdu_B 233 VDKWLFGHKHFVSSICCG-KDY-LLLSAGGDDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAV 310 (450)
T ss_dssp EEEECCCCSSCEEEEEEC-STT-EEEEEESSSEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------CBCCCE
T ss_pred eeeeecCCCCceEEEEEC-CCC-EEEEEeCCCeEEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccccceEEE
Confidence 666 66899999999999 775 89999999999999998864322111000 000000 00000234568
Q ss_pred ceEEeCCCCCcEEEEEe-CCCcEEEEec
Q 014454 378 SDFSWNPCEDWVISSVA-EDNILQIWQM 404 (424)
Q Consensus 378 ~~~~~~~~~~~~l~s~~-~dg~i~vw~~ 404 (424)
.+++|+|++++ |++++ .|+.|+||++
T Consensus 311 ~~i~~~~~~~~-l~~~~~~d~~i~iw~~ 337 (450)
T 2vdu_B 311 SKIIKSKNLPF-VAFFVEATKCIIILEM 337 (450)
T ss_dssp EEEEECSSSSE-EEEEETTCSEEEEEEE
T ss_pred EEEEEeCCCCE-EEEEECCCCeEEEEEe
Confidence 99999999995 66666 8999999999
No 102
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=99.98 E-value=1.5e-29 Score=238.92 Aligned_cols=243 Identities=23% Similarity=0.406 Sum_probs=199.6
Q ss_pred ceeEEEecCCCCcEEEEEeCCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCceeEEEecCCCCceEEEEeCCCcEEEE
Q 014454 127 EVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDDAQICLW 206 (424)
Q Consensus 127 ~v~~~~~~p~~~~~latg~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~iw 206 (424)
.++.|+|++++ +||+|. |++|+|||..+ +.......+.+|...|++|+|+|++. +|++|+.||.|++|
T Consensus 107 y~~~l~wS~~n--~lAvgl-d~tV~lWd~~t--------g~~~~~~~~~~~~~~V~sv~fspdg~-~lasgs~Dg~v~iW 174 (420)
T 4gga_A 107 YLNLVDWSSGN--VLAVAL-DNSVYLWSASS--------GDILQLLQMEQPGEYISSVAWIKEGN-YLAVGTSSAEVQLW 174 (420)
T ss_dssp TCBCEEECTTS--EEEEEE-TTEEEEEETTT--------CCEEEEEECCSTTCCEEEEEECTTSS-EEEEEETTSCEEEE
T ss_pred cceeEEECCCC--EEEEEe-CCEEEEEECCC--------CCEEEEEEecCCCCcEEEEEECCCCC-EEEEEECCCeEEEE
Confidence 56789999854 788876 89999999987 32333344557888999999999988 89999999999999
Q ss_pred eCCCCCCCCcccceeeeecCCccEeeEEEecCCCcEEEEEeCCCeEEEEEcCCCCCCCCeeeeeccCCCeeEEEecCCCC
Q 014454 207 DINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNE 286 (424)
Q Consensus 207 d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~ 286 (424)
|+.++ +.+..+.+|...+.++++++ .++++|+.|+.+++||.+.... .+..+.+|...+..+.|+|++.
T Consensus 175 d~~~~------~~~~~~~~h~~~v~~~s~~~---~~l~sgs~d~~i~~~d~~~~~~--~~~~~~~h~~~~~~~~~~~~g~ 243 (420)
T 4gga_A 175 DVQQQ------KRLRNMTSHSARVGSLSWNS---YILSSGSRSGHIHHHDVRVAEH--HVATLSGHSQEVCGLRWAPDGR 243 (420)
T ss_dssp ETTTT------EEEEEECCCSSCEEEEEEET---TEEEEEETTSEEEEEETTSSSC--EEEEEECCSSCEEEEEECTTSS
T ss_pred EcCCC------cEEEEEeCCCCceEEEeeCC---CEEEEEeCCCceeEeeecccce--eeEEecccccceeeeeecCCCC
Confidence 99876 45677888999999998864 4778999999999999987653 4667789999999999999998
Q ss_pred eEEEEEeCCCcEEEEECCCCC---CcceEecCCCCCEEEEEEcCCCCcEEEEE--ECCCeEEEeeCCCCCcccCCCCcCC
Q 014454 287 WILATGSTDKTVKLFDLRKIS---TALHTFDSHKEEVFQVGWNPKNETILASC--CLGRRLMVWDLSRIDEEQTPEDAED 361 (424)
Q Consensus 287 ~~l~tg~~dg~i~iwd~~~~~---~~~~~~~~h~~~v~~~~~sp~~~~~l~s~--~~dg~i~iwd~~~~~~~~~~~~~~~ 361 (424)
++++++.|+.+++||.+... ..+.....|...|.+++|+|.+..+++++ +.|++|+|||+.++
T Consensus 244 -~l~s~~~D~~v~i~~~~~~~~~~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t~----------- 311 (420)
T 4gga_A 244 -HLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSG----------- 311 (420)
T ss_dssp -EEEEEETTSCEEEEESSCCSSCSCCSEEECCCSSCEEEEEECTTCTTEEEEEECTTTCEEEEEETTTT-----------
T ss_pred -eeeeeeccccceEEeeccccccceeeeeecccCCceeeeeeCCCcccEEEEEeecCCCEEEEEeCCcc-----------
Confidence 69999999999999998633 34667788999999999999988888765 46999999999875
Q ss_pred CCCeeeEEEcCCCCCcceEEeCCCCCcEEEEEe-CCCcEEEEecCCcc
Q 014454 362 GPPELLFIHGGHTSKISDFSWNPCEDWVISSVA-EDNILQIWQMAENI 408 (424)
Q Consensus 362 ~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~-~dg~i~vw~~~~~~ 408 (424)
.++..+..| ..+..+.|+|++..++++++ .|+.|+|||+.++.
T Consensus 312 ---~~~~~~~~~-~~v~~~~~~~~~~~lv~~sg~~d~~I~iwd~~~~~ 355 (420)
T 4gga_A 312 ---ACLSAVDAH-SQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMA 355 (420)
T ss_dssp ---EEEEEEECS-SCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCC
T ss_pred ---ccceeeccc-cceeeeeecCCCCeEEEEEecCCCEEEEEECCCCc
Confidence 445555544 46899999999996554433 79999999998764
No 103
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=99.98 E-value=6.6e-30 Score=237.31 Aligned_cols=251 Identities=16% Similarity=0.236 Sum_probs=197.0
Q ss_pred CccEEEEccCCCCCCCCCCceEEEEEeecCCCCCCCeEEEEEEECCCCCCCcccCCCCCcCCCCCCCCCCCCcEEEE-EE
Q 014454 43 PSLTVEWLPDREEPPGKDYSVQKMILGTHTSENEPNYLMLAQVQLPLDDSENDARHYDDDRSDFGGFGCANGKVQII-QQ 121 (424)
Q Consensus 43 p~~~~~~~p~~~~~~~~~~~~~~~~~gt~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 121 (424)
+..++.|.|+. ..++.|+ .+..|+++.+.-. ..+.. ..
T Consensus 13 ~v~~~~~s~~~----------~~l~~~~-----~dg~i~iw~~~~~--------------------------~~~~~~~~ 51 (379)
T 3jrp_A 13 LIHDAVLDYYG----------KRLATCS-----SDKTIKIFEVEGE--------------------------THKLIDTL 51 (379)
T ss_dssp CEEEEEECSSS----------SEEEEEE-----TTSCEEEEEEETT--------------------------EEEEEEEE
T ss_pred cEEEEEEcCCC----------CEEEEEE-----CCCcEEEEecCCC--------------------------cceeeeEe
Confidence 47788999875 4566665 3456888887411 12222 33
Q ss_pred eccCCceeEEEecCC--CCcEEEEEeCCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCceeEEEecCC--CCceEEEE
Q 014454 122 INHDGEVNRARYMPQ--NPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKF--KEGHLLSG 197 (424)
Q Consensus 122 ~~h~~~v~~~~~~p~--~~~~latg~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~--~~~~l~s~ 197 (424)
..|.+.|++++|+|+ + .+|++|+.||.|++||+.. ........+..|...|.+++|+|+ +. +|+++
T Consensus 52 ~~h~~~v~~~~~~~~~~~-~~l~s~~~dg~v~iwd~~~--------~~~~~~~~~~~~~~~v~~~~~~~~~~~~-~l~~~ 121 (379)
T 3jrp_A 52 TGHEGPVWRVDWAHPKFG-TILASCSYDGKVLIWKEEN--------GRWSQIAVHAVHSASVNSVQWAPHEYGP-LLLVA 121 (379)
T ss_dssp CCCSSCEEEEEECCGGGC-SEEEEEETTSCEEEEEEET--------TEEEEEEEECCCSSCEEEEEECCGGGCS-EEEEE
T ss_pred cCCCCcEEEEEeCCCCCC-CEEEEeccCCEEEEEEcCC--------CceeEeeeecCCCcceEEEEeCCCCCCC-EEEEe
Confidence 469999999999976 5 4899999999999999987 222356777889999999999998 66 89999
Q ss_pred eCCCcEEEEeCCCCCCCCcccceeeeecCCccEeeEEEecC------------CCcEEEEEeCCCeEEEEEcCCCCCC-C
Q 014454 198 SDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLR------------HEYLFGSVGDDQYLLIWDLRTPSVS-K 264 (424)
Q Consensus 198 ~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~------------~~~~~~s~~~dg~i~i~d~~~~~~~-~ 264 (424)
+.||.|++||++..... ....+..|...|.+++|+|. +..+|++++.||.|++||++.+... .
T Consensus 122 ~~d~~i~v~d~~~~~~~----~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~ 197 (379)
T 3jrp_A 122 SSDGKVSVVEFKENGTT----SPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYV 197 (379)
T ss_dssp ETTSEEEEEECCTTSCC----CEEEEECCTTCEEEEEECCCC----------CTTCEEEEEETTSCEEEEEEETTTTEEE
T ss_pred cCCCcEEEEecCCCCce----eeEEecCCCCceEEEEEcCccccccccccCCCCCCEEEEEeCCCeEEEEEecCCCccee
Confidence 99999999999876432 23346679999999999994 2346779999999999999876531 2
Q ss_pred CeeeeeccCCCeeEEEecCCC--CeEEEEEeCCCcEEEEECCCCCCc----ceEecCCCCCEEEEEEcCCCCcEEEEEEC
Q 014454 265 PVQSVVAHQSEVNCLAFNPFN--EWILATGSTDKTVKLFDLRKISTA----LHTFDSHKEEVFQVGWNPKNETILASCCL 338 (424)
Q Consensus 265 ~~~~~~~~~~~v~~v~~~~~~--~~~l~tg~~dg~i~iwd~~~~~~~----~~~~~~h~~~v~~~~~sp~~~~~l~s~~~ 338 (424)
....+..|...|++++|+|++ ..+|++++.||.|++||++....+ +.....|...|++++|+|++. +|++++.
T Consensus 198 ~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~-~l~~~~~ 276 (379)
T 3jrp_A 198 LESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGN-VLALSGG 276 (379)
T ss_dssp EEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSC-CEEEEES
T ss_pred eEEEEecccCcEeEEEECCCCCCCCeEEEEeCCCEEEEEeCCCCCccceeeeeccccCCCcEEEEEEcCCCC-EEEEecC
Confidence 345667899999999999993 347999999999999999974322 222334888999999999996 6889999
Q ss_pred CCeEEEeeCCC
Q 014454 339 GRRLMVWDLSR 349 (424)
Q Consensus 339 dg~i~iwd~~~ 349 (424)
||.|++|++..
T Consensus 277 dg~i~iw~~~~ 287 (379)
T 3jrp_A 277 DNKVTLWKENL 287 (379)
T ss_dssp SSSEEEEEEEE
T ss_pred CCcEEEEeCCC
Confidence 99999999974
No 104
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=99.98 E-value=2.8e-30 Score=236.39 Aligned_cols=220 Identities=25% Similarity=0.358 Sum_probs=187.7
Q ss_pred CCCcEEEecCCCceeEEEecCCCCceEEEEeCCCcEEEEeCCCCCCCCcccceeeeecCCccEeeEEEecCCCcEEEEEe
Q 014454 168 CSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVG 247 (424)
Q Consensus 168 ~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~ 247 (424)
.....+|++|.+.|++|+|+|++..+|+||+.||+|++||+........ .+...+.+|...|.+++|+|++. ++++++
T Consensus 28 ~~l~~tL~GH~~~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~~~-~~~~~l~~h~~~V~~~~~s~dg~-~l~s~~ 105 (340)
T 4aow_A 28 MTLRGTLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYG-IPQRALRGHSHFVSDVVISSDGQ-FALSGS 105 (340)
T ss_dssp EEEEEEECCCSSCEEEEEECTTCTTEEEEEETTSCEEEEEECCSSSCSE-EEEEEECCCSSCEEEEEECTTSS-EEEEEE
T ss_pred eEEEEEECCccCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCcccc-eeeEEEeCCCCCEEEEEECCCCC-EEEEEc
Confidence 3445678999999999999998666899999999999999987654322 34567788999999999999987 557999
Q ss_pred CCCeEEEEEcCCCCCCCCeeeeeccCCCeeEEEecCCCCeEEEEEeCCCcEEEEECCCCCCcceEecCCCCCEEEEEEcC
Q 014454 248 DDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATGSTDKTVKLFDLRKISTALHTFDSHKEEVFQVGWNP 327 (424)
Q Consensus 248 ~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~~h~~~v~~~~~sp 327 (424)
.|+.|++|+...... ......+...+..+.+++.+. +|++|+.|+.+++||++...........|...+..++|++
T Consensus 106 ~d~~i~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~-~l~s~s~d~~~~~~d~~~~~~~~~~~~~~~~~v~~~~~~~ 181 (340)
T 4aow_A 106 WDGTLRLWDLTTGTT---TRRFVGHTKDVLSVAFSSDNR-QIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSP 181 (340)
T ss_dssp TTSEEEEEETTTTEE---EEEEECCSSCEEEEEECTTSS-CEEEEETTSCEEEECTTSCEEEEECSSSCSSCEEEEEECS
T ss_pred ccccceEEeecccce---eeeecCCCCceeEEEEeecCc-cceeecCCCeEEEEEeCCCceEEEEeccccCcccceEEcc
Confidence 999999999988653 555667788899999999888 5899999999999999875555666778999999999998
Q ss_pred CCC-cEEEEEECCCeEEEeeCCCCCcccCCCCcCCCCCeeeEEEcCCCCCcceEEeCCCCCcEEEEEeCCCcEEEEecCC
Q 014454 328 KNE-TILASCCLGRRLMVWDLSRIDEEQTPEDAEDGPPELLFIHGGHTSKISDFSWNPCEDWVISSVAEDNILQIWQMAE 406 (424)
Q Consensus 328 ~~~-~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~vw~~~~ 406 (424)
++. .++++++.|+.|++||++.. .++..+.+|...|++++|+|+++ +|++++.||.|++||+.+
T Consensus 182 ~~~~~~~~s~~~d~~i~i~d~~~~--------------~~~~~~~~h~~~v~~~~~s~~~~-~l~s~s~Dg~i~iwd~~~ 246 (340)
T 4aow_A 182 NSSNPIIVSCGWDKLVKVWNLANC--------------KLKTNHIGHTGYLNTVTVSPDGS-LCASGGKDGQAMLWDLNE 246 (340)
T ss_dssp CSSSCEEEEEETTSCEEEEETTTT--------------EEEEEECCCSSCEEEEEECTTSS-EEEEEETTCEEEEEETTT
T ss_pred CCCCcEEEEEcCCCEEEEEECCCC--------------ceeeEecCCCCcEEEEEECCCCC-EEEEEeCCCeEEEEEecc
Confidence 753 36889999999999999874 66778889999999999999999 799999999999999987
Q ss_pred cc
Q 014454 407 NI 408 (424)
Q Consensus 407 ~~ 408 (424)
..
T Consensus 247 ~~ 248 (340)
T 4aow_A 247 GK 248 (340)
T ss_dssp TE
T ss_pred Cc
Confidence 63
No 105
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=99.98 E-value=2.3e-29 Score=239.43 Aligned_cols=236 Identities=20% Similarity=0.378 Sum_probs=201.4
Q ss_pred eccCCceeEEEecCCCCcEEEEEeCCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCceeEEEecCCCCceEEEEeCCC
Q 014454 122 INHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDDA 201 (424)
Q Consensus 122 ~~h~~~v~~~~~~p~~~~~latg~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg 201 (424)
.+|.+.|.+++|++ .++++|+.||.|++||+.+ ......+.+|...|.+++|++ . .|++|+.||
T Consensus 156 ~~h~~~v~~~~~~~---~~l~s~~~dg~i~vwd~~~----------~~~~~~~~~h~~~v~~~~~~~--~-~l~s~s~dg 219 (445)
T 2ovr_B 156 VGHTGGVWSSQMRD---NIIISGSTDRTLKVWNAET----------GECIHTLYGHTSTVRCMHLHE--K-RVVSGSRDA 219 (445)
T ss_dssp CCCSSCEEEEEEET---TEEEEEETTSCEEEEETTT----------TEEEEEECCCSSCEEEEEEET--T-EEEEEETTS
T ss_pred cCCCCCEEEEEecC---CEEEEEeCCCeEEEEECCc----------CcEEEEECCCCCcEEEEEecC--C-EEEEEeCCC
Confidence 47999999999984 3899999999999999987 455678889999999999963 3 799999999
Q ss_pred cEEEEeCCCCCCCCcccceeeeecCCccEeeEEEecCCCcEEEEEeCCCeEEEEEcCCCCCCCCeeeeeccCCCeeEEEe
Q 014454 202 QICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAF 281 (424)
Q Consensus 202 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~v~~ 281 (424)
.|++||+.++ ..+..+.+|...|.+++| ++. .+++++.||.|++||++++. .+..+..|...|.+++|
T Consensus 220 ~i~~wd~~~~------~~~~~~~~~~~~v~~~~~--~~~-~l~~~~~dg~i~iwd~~~~~---~~~~~~~~~~~v~~~~~ 287 (445)
T 2ovr_B 220 TLRVWDIETG------QCLHVLMGHVAAVRCVQY--DGR-RVVSGAYDFMVKVWDPETET---CLHTLQGHTNRVYSLQF 287 (445)
T ss_dssp EEEEEESSSC------CEEEEEECCSSCEEEEEE--CSS-CEEEEETTSCEEEEEGGGTE---EEEEECCCSSCEEEEEE
T ss_pred EEEEEECCCC------cEEEEEcCCcccEEEEEE--CCC-EEEEEcCCCEEEEEECCCCc---EeEEecCCCCceEEEEE
Confidence 9999999876 345667789999999999 444 56799999999999999865 37777889999999999
Q ss_pred cCCCCeEEEEEeCCCcEEEEECCCCCCcceEecCCCCCEEEEEEcCCCCcEEEEEECCCeEEEeeCCCCCcccCCCCcCC
Q 014454 282 NPFNEWILATGSTDKTVKLFDLRKISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPEDAED 361 (424)
Q Consensus 282 ~~~~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~ 361 (424)
++. .+++|+.||.|++||+++ ++++..+..|...+.++.+++ .+|++++.||.|++||++++
T Consensus 288 --~~~-~l~~~~~d~~i~i~d~~~-~~~~~~~~~~~~~v~~~~~~~---~~l~~~~~dg~i~vwd~~~~----------- 349 (445)
T 2ovr_B 288 --DGI-HVVSGSLDTSIRVWDVET-GNCIHTLTGHQSLTSGMELKD---NILVSGNADSTVKIWDIKTG----------- 349 (445)
T ss_dssp --CSS-EEEEEETTSCEEEEETTT-CCEEEEECCCCSCEEEEEEET---TEEEEEETTSCEEEEETTTC-----------
T ss_pred --CCC-EEEEEeCCCeEEEEECCC-CCEEEEEcCCcccEEEEEEeC---CEEEEEeCCCeEEEEECCCC-----------
Confidence 455 699999999999999998 788899999999999998864 37999999999999999875
Q ss_pred CCCeeeEEEcC---CCCCcceEEeCCCCCcEEEEEeCCCcEEEEecCCccC
Q 014454 362 GPPELLFIHGG---HTSKISDFSWNPCEDWVISSVAEDNILQIWQMAENIY 409 (424)
Q Consensus 362 ~~~~~~~~~~~---h~~~v~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~ 409 (424)
..+..+.+ |...|++++|++ . +|++++.||.|++|++.++..
T Consensus 350 ---~~~~~~~~~~~~~~~v~~~~~~~--~-~l~s~~~dg~v~iwd~~~~~~ 394 (445)
T 2ovr_B 350 ---QCLQTLQGPNKHQSAVTCLQFNK--N-FVITSSDDGTVKLWDLKTGEF 394 (445)
T ss_dssp ---CEEEEECSTTSCSSCEEEEEECS--S-EEEEEETTSEEEEEETTTCCE
T ss_pred ---cEEEEEccCCCCCCCEEEEEECC--C-EEEEEeCCCeEEEEECCCCce
Confidence 44555554 888899999964 4 799999999999999987743
No 106
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.98 E-value=1.1e-30 Score=239.94 Aligned_cols=237 Identities=10% Similarity=0.047 Sum_probs=176.5
Q ss_pred CCCCcEEEEEeCCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCceeEEEecCCCCceEEEEeCCCcEEEEeCCCCCCC
Q 014454 135 PQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKN 214 (424)
Q Consensus 135 p~~~~~latg~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~ 214 (424)
+++ .++|+|+.||.|++||+.+ ......+. ...|.++.|+|. +++++.|++|++|+.......
T Consensus 46 ~d~-~~l~sg~~Dg~v~iwd~~~----------~~~~~~~~--~~~v~~~~~~~~----~~s~s~D~~i~~w~~~~~~~~ 108 (343)
T 3lrv_A 46 YDK-WVCMCRCEDGALHFTQLKD----------SKTITTIT--TPNPRTGGEHPA----IISRGPCNRLLLLYPGNQITI 108 (343)
T ss_dssp EEE-EEEEEEEETTEEEEEEESS----------SSCEEEEE--EECCCTTCCCCS----EEEECSTTEEEEEETTTEEEE
T ss_pred CCC-CEEEEECCCCcEEEEECCC----------CcEEEEEe--cCCceeeeeCCc----eEEecCCCeEEEEEccCceEE
Confidence 344 4899999999999999987 34444454 456888899885 999999999999987642100
Q ss_pred ---Ccccceeee-ecCCccEeeEEEec--CCCcEEEEEeCCCeEEEEEcCCCCCCCCeeee-eccCCCeeEEEecCCCCe
Q 014454 215 ---KSLEAMQIF-KVHEGVVEDVAWHL--RHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSV-VAHQSEVNCLAFNPFNEW 287 (424)
Q Consensus 215 ---~~~~~~~~~-~~~~~~v~~~~~~~--~~~~~~~s~~~dg~i~i~d~~~~~~~~~~~~~-~~~~~~v~~v~~~~~~~~ 287 (424)
.....+... ..|...|.+++|+| ++. ++++++.||.|++||++++.. +... ..+...+++++|+|++.
T Consensus 109 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~-~l~s~s~dg~i~~wd~~~~~~---~~~~~~~~~~~i~~~~~~pdg~- 183 (343)
T 3lrv_A 109 LDSKTNKVLREIEVDSANEIIYMYGHNEVNTE-YFIWADNRGTIGFQSYEDDSQ---YIVHSAKSDVEYSSGVLHKDSL- 183 (343)
T ss_dssp EETTTCCEEEEEECCCSSCEEEEECCC---CC-EEEEEETTCCEEEEESSSSCE---EEEECCCSSCCCCEEEECTTSC-
T ss_pred eecCCcceeEEeecCCCCCEEEEEcCCCCCCC-EEEEEeCCCcEEEEECCCCcE---EEEEecCCCCceEEEEECCCCC-
Confidence 011112222 25668899999999 876 567999999999999998664 3333 34566899999999998
Q ss_pred EEEEEeCCCcEEEEECCCCCCcceEecC-CCCCEEEEEEcCCCCcEEEEEECCCeEEEeeCCCCCcccCCCCcCCCCCee
Q 014454 288 ILATGSTDKTVKLFDLRKISTALHTFDS-HKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPEDAEDGPPEL 366 (424)
Q Consensus 288 ~l~tg~~dg~i~iwd~~~~~~~~~~~~~-h~~~v~~~~~sp~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~ 366 (424)
+|++|+.||.|++||+++.......+.. |..+|++++|+|++. +|++++ |+.|++||++........
T Consensus 184 ~lasg~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~l~fs~~g~-~l~s~~-~~~v~iwd~~~~~~~~~~---------- 251 (343)
T 3lrv_A 184 LLALYSPDGILDVYNLSSPDQASSRFPVDEEAKIKEVKFADNGY-WMVVEC-DQTVVCFDLRKDVGTLAY---------- 251 (343)
T ss_dssp EEEEECTTSCEEEEESSCTTSCCEECCCCTTSCEEEEEECTTSS-EEEEEE-SSBEEEEETTSSTTCBSS----------
T ss_pred EEEEEcCCCEEEEEECCCCCCCccEEeccCCCCEEEEEEeCCCC-EEEEEe-CCeEEEEEcCCCCcceee----------
Confidence 7999999999999999984333378887 999999999999995 788888 559999999986543221
Q ss_pred eEEEcCCCCCcc--eEEeCCCCCcEEEEEeC-CCcEEEEecCCc
Q 014454 367 LFIHGGHTSKIS--DFSWNPCEDWVISSVAE-DNILQIWQMAEN 407 (424)
Q Consensus 367 ~~~~~~h~~~v~--~~~~~~~~~~~l~s~~~-dg~i~vw~~~~~ 407 (424)
..+..|...+. +++|+|+++ +|++++. |+.++||++...
T Consensus 252 -~~~~~~~~~~~~~~~~~~~~g~-~l~~~s~~d~~i~v~~~~~~ 293 (343)
T 3lrv_A 252 -PTYTIPEFKTGTVTYDIDDSGK-NMIAYSNESNSLTIYKFDKK 293 (343)
T ss_dssp -CCCBC-----CCEEEEECTTSS-EEEEEETTTTEEEEEEECTT
T ss_pred -cccccccccccceEEEECCCCC-EEEEecCCCCcEEEEEEccc
Confidence 11122333344 599999999 5777777 999999999654
No 107
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=99.98 E-value=1.4e-29 Score=231.86 Aligned_cols=265 Identities=14% Similarity=0.172 Sum_probs=202.6
Q ss_pred CccEEEEccCCCCCCCCCCceEEEEEeecCCCCCCCeEEEEEEECCCCCCCcccCCCCCcCCCCCCCCCCCCcEEEEE-E
Q 014454 43 PSLTVEWLPDREEPPGKDYSVQKMILGTHTSENEPNYLMLAQVQLPLDDSENDARHYDDDRSDFGGFGCANGKVQIIQ-Q 121 (424)
Q Consensus 43 p~~~~~~~p~~~~~~~~~~~~~~~~~gt~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 121 (424)
+..+++|.|+. ..++.|+ .+..|+++.+.-. ....+... .
T Consensus 13 ~v~~~~~~~~~----------~~l~~~~-----~dg~i~iw~~~~~------------------------~~~~~~~~~~ 53 (351)
T 3f3f_A 13 LVHDVVYDFYG----------RHVATCS-----SDQHIKVFKLDKD------------------------TSNWELSDSW 53 (351)
T ss_dssp CEEEEEECSSS----------SEEEEEE-----TTSEEEEEEECSS------------------------SCCEEEEEEE
T ss_pred ceeEEEEcCCC----------CEEEEee-----CCCeEEEEECCCC------------------------CCcceeccee
Confidence 47789999965 3566555 4567888887311 11223333 3
Q ss_pred eccCCceeEEEecCC--CCcEEEEEeCCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCceeEEEecCC--CCceEEEE
Q 014454 122 INHDGEVNRARYMPQ--NPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKF--KEGHLLSG 197 (424)
Q Consensus 122 ~~h~~~v~~~~~~p~--~~~~latg~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~--~~~~l~s~ 197 (424)
..|.+.|++++|+|. + .+|++|+.||.|++||+........ .........+.+|...|.+++|+|+ +. +|+++
T Consensus 54 ~~~~~~v~~~~~~~~~d~-~~l~s~~~dg~v~vwd~~~~~~~~~-~~~~~~~~~~~~~~~~v~~~~~~~~~~~~-~l~~~ 130 (351)
T 3f3f_A 54 RAHDSSIVAIDWASPEYG-RIIASASYDKTVKLWEEDPDQEECS-GRRWNKLCTLNDSKGSLYSVKFAPAHLGL-KLACL 130 (351)
T ss_dssp ECCSSCEEEEEECCGGGC-SEEEEEETTSCEEEEEECTTSCTTS-SCSEEEEEEECCCSSCEEEEEECCGGGCS-EEEEE
T ss_pred ccCCCcEEEEEEcCCCCC-CEEEEEcCCCeEEEEecCCCccccc-ccCcceeeeecccCCceeEEEEcCCCCCc-EEEEe
Confidence 469999999999994 5 4899999999999999987321110 0111446677889999999999998 66 79999
Q ss_pred eCCCcEEEEeCCCCCCCCcccceee-------eecCCccEeeEEEecC--CCcEEEEEeCCCeEEEEEcCCCCCCCCeee
Q 014454 198 SDDAQICLWDINAAPKNKSLEAMQI-------FKVHEGVVEDVAWHLR--HEYLFGSVGDDQYLLIWDLRTPSVSKPVQS 268 (424)
Q Consensus 198 ~~dg~i~iwd~~~~~~~~~~~~~~~-------~~~~~~~v~~~~~~~~--~~~~~~s~~~dg~i~i~d~~~~~~~~~~~~ 268 (424)
+.||.|++||+++......+..... ...|...+.+++|+|+ ...++++++.++.+.+|+...+. ...+..
T Consensus 131 ~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~ 209 (351)
T 3f3f_A 131 GNDGILRLYDALEPSDLRSWTLTSEMKVLSIPPANHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGK-LHVAAK 209 (351)
T ss_dssp ETTCEEEEEECSSTTCTTCCEEEEEEESCSCCCSSCSCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTSC-EEEEEE
T ss_pred cCCCcEEEecCCChHHhccccccccccccccccCCcccceeEEEeccCCCCCcEEEEecCCCcEEEEccCCCc-eeeeee
Confidence 9999999999988765444322111 1257789999999997 34577899999999888776654 233566
Q ss_pred eeccCCCeeEEEecCCCC---eEEEEEeCCCcEEEEECCCCC--------------------------------------
Q 014454 269 VVAHQSEVNCLAFNPFNE---WILATGSTDKTVKLFDLRKIS-------------------------------------- 307 (424)
Q Consensus 269 ~~~~~~~v~~v~~~~~~~---~~l~tg~~dg~i~iwd~~~~~-------------------------------------- 307 (424)
+.+|...|++++|+|++. .+|++|+.||.|++||++...
T Consensus 210 ~~~h~~~i~~~~~~p~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (351)
T 3f3f_A 210 LPGHKSLIRSISWAPSIGRWYQLIATGCKDGRIRIFKITEKLSPLASEESLTNSNMFDNSADVDMDAQGRSDSNTEEKAE 289 (351)
T ss_dssp CCCCCSCEEEEEECCCSSCSSEEEEEEETTSCEEEEEEEECC--------------------------------------
T ss_pred cCCCCcceeEEEECCCCCCcceEEEEEcCCCeEEEEeCCCCcCccccCCcccceeccCCCcccccccccccccccceeee
Confidence 778999999999999973 489999999999999998621
Q ss_pred -------CcceEecCCCCCEEEEEEcCCCCcEEEEEECCCeEEEeeCCCCC
Q 014454 308 -------TALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRID 351 (424)
Q Consensus 308 -------~~~~~~~~h~~~v~~~~~sp~~~~~l~s~~~dg~i~iwd~~~~~ 351 (424)
.++..+.+|...|++++|+|+++ +|++++.||.|+||++....
T Consensus 290 ~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~-~l~s~~~dg~v~iw~~~~~~ 339 (351)
T 3f3f_A 290 LQSNLQVELLSEHDDHNGEVWSVSWNLTGT-ILSSAGDDGKVRLWKATYSN 339 (351)
T ss_dssp -CCSEEEEEEEEECTTSSCEEEEEECSSSC-CEEEEETTSCEEEEEECTTS
T ss_pred ecccccccEEEEEecccccEEEEEEcCCCC-EEEEecCCCcEEEEecCcCc
Confidence 45667788999999999999996 79999999999999998753
No 108
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=99.97 E-value=4.9e-30 Score=257.63 Aligned_cols=216 Identities=24% Similarity=0.339 Sum_probs=183.8
Q ss_pred cEEEecCCCceeEEEecCCCCceEEEEeCCCcEEEEeCCCCCCCCcccceeeeecCCccEeeEEEecCCCcEEEEEeCCC
Q 014454 171 DLRLRGHSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQ 250 (424)
Q Consensus 171 ~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~dg 250 (424)
...+.+|...|++|+|+|++..+|++|+.||+|++|++........ .....+.+|...|.+++|+|++. ++++|+.||
T Consensus 375 ~~~l~~H~~~V~~v~~~~~~~~~l~s~s~D~~i~~W~~~~~~~~~~-~~~~~~~~h~~~v~~v~~s~~g~-~l~sgs~Dg 452 (694)
T 3dm0_A 375 KGTMRAHTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYG-VAQRRLTGHSHFVEDVVLSSDGQ-FALSGSWDG 452 (694)
T ss_dssp EEEEECCSSCEEEEECCTTCCSEEEEEETTSEEEEEECCCSTTCSC-EEEEEEECCSSCEEEEEECTTSS-EEEEEETTS
T ss_pred hhhcccCCceeEEEEecCCCCCEEEEEeCCCcEEEEEccCCCcccc-cccceecCCCCcEEEEEECCCCC-EEEEEeCCC
Confidence 3468899999999999998777899999999999999976543211 23456788999999999999986 567999999
Q ss_pred eEEEEEcCCCCCCCCeeeeeccCCCeeEEEecCCCCeEEEEEeCCCcEEEEECCCCCCcceE---ecCCCCCEEEEEEcC
Q 014454 251 YLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATGSTDKTVKLFDLRKISTALHT---FDSHKEEVFQVGWNP 327 (424)
Q Consensus 251 ~i~i~d~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~l~tg~~dg~i~iwd~~~~~~~~~~---~~~h~~~v~~~~~sp 327 (424)
.|+|||++++.. +..+.+|...|.+++|+|++. +|++|+.|++|++||++. ...... ..+|...|.+++|+|
T Consensus 453 ~v~vwd~~~~~~---~~~~~~h~~~v~~~~~s~~~~-~l~s~s~D~~i~iwd~~~-~~~~~~~~~~~~h~~~v~~~~~~~ 527 (694)
T 3dm0_A 453 ELRLWDLAAGVS---TRRFVGHTKDVLSVAFSLDNR-QIVSASRDRTIKLWNTLG-ECKYTISEGGEGHRDWVSCVRFSP 527 (694)
T ss_dssp EEEEEETTTTEE---EEEEECCSSCEEEEEECTTSS-CEEEEETTSCEEEECTTS-CEEEEECSSTTSCSSCEEEEEECS
T ss_pred cEEEEECCCCcc---eeEEeCCCCCEEEEEEeCCCC-EEEEEeCCCEEEEEECCC-CcceeeccCCCCCCCcEEEEEEeC
Confidence 999999998653 677889999999999999998 599999999999999875 222211 246889999999999
Q ss_pred CCC-cEEEEEECCCeEEEeeCCCCCcccCCCCcCCCCCeeeEEEcCCCCCcceEEeCCCCCcEEEEEeCCCcEEEEecCC
Q 014454 328 KNE-TILASCCLGRRLMVWDLSRIDEEQTPEDAEDGPPELLFIHGGHTSKISDFSWNPCEDWVISSVAEDNILQIWQMAE 406 (424)
Q Consensus 328 ~~~-~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~vw~~~~ 406 (424)
++. .+|++++.|+.|+|||++.. .+...+.+|...|++++|+|+++ +|++++.||.|++||+.+
T Consensus 528 ~~~~~~l~s~s~d~~v~vwd~~~~--------------~~~~~~~~h~~~v~~v~~spdg~-~l~sg~~Dg~i~iwd~~~ 592 (694)
T 3dm0_A 528 NTLQPTIVSASWDKTVKVWNLSNC--------------KLRSTLAGHTGYVSTVAVSPDGS-LCASGGKDGVVLLWDLAE 592 (694)
T ss_dssp CSSSCEEEEEETTSCEEEEETTTC--------------CEEEEECCCSSCEEEEEECTTSS-EEEEEETTSBCEEEETTT
T ss_pred CCCcceEEEEeCCCeEEEEECCCC--------------cEEEEEcCCCCCEEEEEEeCCCC-EEEEEeCCCeEEEEECCC
Confidence 863 47999999999999999864 55677889999999999999999 799999999999999987
Q ss_pred cc
Q 014454 407 NI 408 (424)
Q Consensus 407 ~~ 408 (424)
+.
T Consensus 593 ~~ 594 (694)
T 3dm0_A 593 GK 594 (694)
T ss_dssp TE
T ss_pred Cc
Confidence 64
No 109
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.97 E-value=2.4e-30 Score=243.74 Aligned_cols=245 Identities=9% Similarity=0.065 Sum_probs=186.0
Q ss_pred ccCCceeEEEecCCCCcEEEEEeCCCeEEEEeCCCCCCCCC---------------------CCCCCCCcEEEecCCCce
Q 014454 123 NHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPP---------------------LDGACSPDLRLRGHSTEG 181 (424)
Q Consensus 123 ~h~~~v~~~~~~p~~~~~latg~~dg~v~iw~~~~~~~~~~---------------------~~~~~~~~~~~~~h~~~v 181 (424)
.....|.+++|+|||+ ++|+++.|++|+ |......... ..........+ .|...|
T Consensus 13 ~~~~~v~sv~~SpDG~-~iASas~D~TV~--d~~~~~~l~gh~~~v~~V~FsPdg~~~~~~~~~~~~~~~~~~-~~~~~V 88 (588)
T 2j04_A 13 EFEDWKNNLTWARDGT-LYLTTFPDISIG--QPKYAKDINCNSKNLFHVKEFPLEFENKLDFELAQQNGLLNS-QPVCYP 88 (588)
T ss_dssp CCSSSSCCEEECTTSC-EEEECSSSEEEE--EECCCSCCSSBGGGTEEEEEECCCCCCTTTTSCCCSSCSSTT-SCSCCE
T ss_pred HhhccEEEEEECCCCC-EEEEEcCCceee--cccccceecCCCccEEEEEECCCCCcceEEEEeCCCceEeec-CCCCcE
Confidence 3457899999999997 899999999997 5332110000 00011111111 457789
Q ss_pred eEEEecCCCCceEEEEeCCCcEEEEeCCCCCCCCcccceeeeecCCc-----cEeeEEEecCCCcEEEEEeCCCeEEEEE
Q 014454 182 YGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEG-----VVEDVAWHLRHEYLFGSVGDDQYLLIWD 256 (424)
Q Consensus 182 ~~l~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~-----~v~~~~~~~~~~~~~~s~~~dg~i~i~d 256 (424)
.+++|+|+|. +||+++.||.|++||.+. .+..+. |.. .+.+++|+|+++ ++|+|+.||+|+|||
T Consensus 89 ~~vawSPdG~-~LAs~s~dg~V~iwd~~~--------~l~~l~-~~~~~~~~sv~svafSPDG~-~LAsgs~DGtVkIWd 157 (588)
T 2j04_A 89 RVCKPSPIDD-WMAVLSNNGNVSVFKDNK--------MLTNLD-SKGNLSSRTYHCFEWNPIES-SIVVGNEDGELQFFS 157 (588)
T ss_dssp EEEEECSSSS-CEEEEETTSCEEEEETTE--------EEEECC-CSSCSTTTCEEEEEECSSSS-CEEEEETTSEEEEEE
T ss_pred EEEEECCCCC-EEEEEeCCCcEEEEeCCc--------eeeecc-CCCccccccEEEEEEcCCCC-EEEEEcCCCEEEEEE
Confidence 9999999998 799999999999999542 344445 554 599999999997 557999999999999
Q ss_pred cCCCCCCCC----eeee----eccCCCeeEEEecCCCCeEEEEEeCCCcEEEEECCCCCC--cceEe-cCCCCCEEEEEE
Q 014454 257 LRTPSVSKP----VQSV----VAHQSEVNCLAFNPFNEWILATGSTDKTVKLFDLRKIST--ALHTF-DSHKEEVFQVGW 325 (424)
Q Consensus 257 ~~~~~~~~~----~~~~----~~~~~~v~~v~~~~~~~~~l~tg~~dg~i~iwd~~~~~~--~~~~~-~~h~~~v~~~~~ 325 (424)
+..+....+ +..+ .+|...|.+++|+|++ +++++.|++|++||+..... ..+++ .+|...|.+++|
T Consensus 158 ~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg---Laass~D~tVrlWd~~~~~~~~~~~tL~~~h~~~V~svaF 234 (588)
T 2j04_A 158 IRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV---LVAALSNNSVFSMTVSASSHQPVSRMIQNASRRKITDLKI 234 (588)
T ss_dssp CCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE---EEEEETTCCEEEECCCSSSSCCCEEEEECCCSSCCCCEEE
T ss_pred CCCCccccccceeeeeeecccccccccEEEEEEcCCc---EEEEeCCCeEEEEECCCCccccceeeecccccCcEEEEEE
Confidence 998653222 3554 5677899999999987 67888899999999987331 23456 478899999999
Q ss_pred cCCCCcEEEEEECCCeEEEeeCCCCCcccCCCCcCCCCCeeeEEEcCCCCCcceEEe--CCCCCcEEEEEeCCCcEEEEe
Q 014454 326 NPKNETILASCCLGRRLMVWDLSRIDEEQTPEDAEDGPPELLFIHGGHTSKISDFSW--NPCEDWVISSVAEDNILQIWQ 403 (424)
Q Consensus 326 sp~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~--~~~~~~~l~s~~~dg~i~vw~ 403 (424)
+ + ..||+++ ++.|++||+... .......+|...|++++| +|++. .++++++||+ ++|.
T Consensus 235 s--g-~~LASa~-~~tIkLWd~~~~--------------~~~~~~~gh~~~V~~va~~~s~d~~-~La~a~edG~-klw~ 294 (588)
T 2j04_A 235 V--D-YKVVLTC-PGYVHKIDLKNY--------------SISSLKTGSLENFHIIPLNHEKEST-ILLMSNKTSY-KVLL 294 (588)
T ss_dssp E--T-TEEEEEC-SSEEEEEETTTT--------------EEEEEECSCCSCCCEEEETTCSSCE-EEEECSSCEE-EEEE
T ss_pred E--C-CEEEEEe-CCeEEEEECCCC--------------eEEEEEcCCCceEEEEEeeeCCCCC-EEEEEcCCCC-EEEe
Confidence 9 4 4788887 699999999874 332333389999999999 99998 7999999999 9999
Q ss_pred cC
Q 014454 404 MA 405 (424)
Q Consensus 404 ~~ 405 (424)
+.
T Consensus 295 ~d 296 (588)
T 2j04_A 295 ED 296 (588)
T ss_dssp SS
T ss_pred ec
Confidence 86
No 110
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.97 E-value=3.1e-29 Score=231.22 Aligned_cols=238 Identities=10% Similarity=0.159 Sum_probs=179.5
Q ss_pred EeccCCceeEEEecCCCCcEEEEEeCCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCceeEEEecCCCCceEEEEeCC
Q 014454 121 QINHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDD 200 (424)
Q Consensus 121 ~~~h~~~v~~~~~~p~~~~~latg~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~d 200 (424)
...|.+.|++++|+|++. +||+|+.+| ++||++.. ...... .+...+..+++.+.+..++++++.|
T Consensus 15 ~~~h~~~V~~v~fs~dg~-~la~g~~~~-~~iw~~~~----------~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~d 80 (355)
T 3vu4_A 15 ENHVSNPVTDYEFNQDQS-CLILSTLKS-FEIYNVHP----------VAHIMS--QEMRHLSKVRMLHRTNYVAFVTGVK 80 (355)
T ss_dssp ----CCCCCEEEECTTSS-EEEEECSSE-EEEEEETT----------EEEEEE--EECSCCCEEEECTTSSEEEEECSST
T ss_pred cccCCCceEEEEECCCCC-EEEEEcCCE-EEEEecCC----------cceeee--eecCCeEEEEEcCCCCEEEEEECCc
Confidence 356999999999999997 888888665 78999876 222222 2223477888888777445778889
Q ss_pred CcEEEEeCCCCCCCCcccceeeeecCCccEeeEEEecCCCcEEEEEeCCCeEEEEEcCCC-CCCCCeeeeeccCCCeeEE
Q 014454 201 AQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTP-SVSKPVQSVVAHQSEVNCL 279 (424)
Q Consensus 201 g~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~dg~i~i~d~~~~-~~~~~~~~~~~~~~~v~~v 279 (424)
+.|++||+.++. .+..+. +...|.+++++++. ++ ++ .++.|++||+++. +. +..+.. +...+
T Consensus 81 ~~v~iWd~~~~~------~~~~~~-~~~~v~~v~~~~~~--~~-~~-~~~~i~i~d~~~~~~~---~~~~~~---~~~~~ 143 (355)
T 3vu4_A 81 EVVHIWDDVKKQ------DVSRIK-VDAPVKDLFLSREF--IV-VS-YGDVISVFKFGNPWKR---ITDDIR---FGGVC 143 (355)
T ss_dssp TEEEEEETTTTE------EEEEEE-CSSCEEEEEECSSE--EE-EE-ETTEEEEEESSTTCCB---SSCCEE---EEEEE
T ss_pred cEEEEEECCCCc------EEEEEE-CCCceEEEEEcCCE--EE-EE-EcCEEEEEECCCCcee---eEEecc---CCceE
Confidence 999999998763 334444 66799999998753 33 33 4789999999987 43 222222 34455
Q ss_pred EecCCCCeEEEE--EeCCCcEEEEECCCCC--------------Cc-ceEecCCCCCEEEEEEcCCCCcEEEEEECCCe-
Q 014454 280 AFNPFNEWILAT--GSTDKTVKLFDLRKIS--------------TA-LHTFDSHKEEVFQVGWNPKNETILASCCLGRR- 341 (424)
Q Consensus 280 ~~~~~~~~~l~t--g~~dg~i~iwd~~~~~--------------~~-~~~~~~h~~~v~~~~~sp~~~~~l~s~~~dg~- 341 (424)
++++ . ++++ |+.||.|++||+++.. .+ +..+.+|...|++++|+|++. +|++|+.|++
T Consensus 144 ~~s~--~-~la~~sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~-~l~s~s~d~~~ 219 (355)
T 3vu4_A 144 EFSN--G-LLVYSNEFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSD-MVATCSQDGTI 219 (355)
T ss_dssp EEET--T-EEEEEESSCTTCEEEEECCC------------------CCEEECCCSSCEEEEEECTTSS-EEEEEETTCSE
T ss_pred EEEc--c-EEEEeCCCcCcEEEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECCCCC-EEEEEeCCCCE
Confidence 6666 4 3544 6889999999999733 12 788999999999999999995 8999999998
Q ss_pred EEEeeCCCCCcccCCCCcCCCCCeeeEEEc-C-CCCCcceEEeCCCCCcEEEEEeCCCcEEEEecCCcc
Q 014454 342 LMVWDLSRIDEEQTPEDAEDGPPELLFIHG-G-HTSKISDFSWNPCEDWVISSVAEDNILQIWQMAENI 408 (424)
Q Consensus 342 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~-~-h~~~v~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~ 408 (424)
|+|||++++ .++..+. + |...|++++|+|+++ +|++++.|+.|+||++..+.
T Consensus 220 v~iwd~~~~--------------~~~~~~~~g~h~~~v~~~~~s~~~~-~l~s~s~d~~v~iw~~~~~~ 273 (355)
T 3vu4_A 220 IRVFKTEDG--------------VLVREFRRGLDRADVVDMKWSTDGS-KLAVVSDKWTLHVFEIFNDQ 273 (355)
T ss_dssp EEEEETTTC--------------CEEEEEECTTCCSCEEEEEECTTSC-EEEEEETTCEEEEEESSCCS
T ss_pred EEEEECCCC--------------cEEEEEEcCCCCCcEEEEEECCCCC-EEEEEECCCEEEEEEccCCC
Confidence 999999875 4556666 5 999999999999999 69999999999999998764
No 111
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=99.97 E-value=1.4e-28 Score=234.08 Aligned_cols=237 Identities=19% Similarity=0.291 Sum_probs=201.8
Q ss_pred EeccCCceeEEEecCCCCcEEEEEeCCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCceeEEEecCCCCceEEEEeCC
Q 014454 121 QINHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDD 200 (424)
Q Consensus 121 ~~~h~~~v~~~~~~p~~~~~latg~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~d 200 (424)
...|...|.+++|++ ..+++|+.||.|++||+.. ......+.+|...|.+++| ++. +|++|+.|
T Consensus 195 ~~~h~~~v~~~~~~~---~~l~s~s~dg~i~~wd~~~----------~~~~~~~~~~~~~v~~~~~--~~~-~l~~~~~d 258 (445)
T 2ovr_B 195 LYGHTSTVRCMHLHE---KRVVSGSRDATLRVWDIET----------GQCLHVLMGHVAAVRCVQY--DGR-RVVSGAYD 258 (445)
T ss_dssp ECCCSSCEEEEEEET---TEEEEEETTSEEEEEESSS----------CCEEEEEECCSSCEEEEEE--CSS-CEEEEETT
T ss_pred ECCCCCcEEEEEecC---CEEEEEeCCCEEEEEECCC----------CcEEEEEcCCcccEEEEEE--CCC-EEEEEcCC
Confidence 346999999999964 3799999999999999987 4567788899999999999 354 79999999
Q ss_pred CcEEEEeCCCCCCCCcccceeeeecCCccEeeEEEecCCCcEEEEEeCCCeEEEEEcCCCCCCCCeeeeeccCCCeeEEE
Q 014454 201 AQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLA 280 (424)
Q Consensus 201 g~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~v~ 280 (424)
|.|++||++++ ..+..+.+|...|.+++| ++. .+++++.||.|++||+++++. +..+..|...+.++.
T Consensus 259 g~i~iwd~~~~------~~~~~~~~~~~~v~~~~~--~~~-~l~~~~~d~~i~i~d~~~~~~---~~~~~~~~~~v~~~~ 326 (445)
T 2ovr_B 259 FMVKVWDPETE------TCLHTLQGHTNRVYSLQF--DGI-HVVSGSLDTSIRVWDVETGNC---IHTLTGHQSLTSGME 326 (445)
T ss_dssp SCEEEEEGGGT------EEEEEECCCSSCEEEEEE--CSS-EEEEEETTSCEEEEETTTCCE---EEEECCCCSCEEEEE
T ss_pred CEEEEEECCCC------cEeEEecCCCCceEEEEE--CCC-EEEEEeCCCeEEEEECCCCCE---EEEEcCCcccEEEEE
Confidence 99999999765 356667789999999999 444 567999999999999998664 777888999999999
Q ss_pred ecCCCCeEEEEEeCCCcEEEEECCCCCCcceEecC---CCCCEEEEEEcCCCCcEEEEEECCCeEEEeeCCCCCcccCCC
Q 014454 281 FNPFNEWILATGSTDKTVKLFDLRKISTALHTFDS---HKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPE 357 (424)
Q Consensus 281 ~~~~~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~~---h~~~v~~~~~sp~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~ 357 (424)
++ +. +|++|+.||.|++||+++ ++++..+.. |...|.+++|++ .+|++++.||.|++||+.++
T Consensus 327 ~~--~~-~l~~~~~dg~i~vwd~~~-~~~~~~~~~~~~~~~~v~~~~~~~---~~l~s~~~dg~v~iwd~~~~------- 392 (445)
T 2ovr_B 327 LK--DN-ILVSGNADSTVKIWDIKT-GQCLQTLQGPNKHQSAVTCLQFNK---NFVITSSDDGTVKLWDLKTG------- 392 (445)
T ss_dssp EE--TT-EEEEEETTSCEEEEETTT-CCEEEEECSTTSCSSCEEEEEECS---SEEEEEETTSEEEEEETTTC-------
T ss_pred Ee--CC-EEEEEeCCCeEEEEECCC-CcEEEEEccCCCCCCCEEEEEECC---CEEEEEeCCCeEEEEECCCC-------
Confidence 86 44 699999999999999998 677888876 888999999964 47999999999999999875
Q ss_pred CcCCCCCeeeEEE-----cCCCCCcceEEeCCCCCcEEEEEeCCCc----EEEEecCCc
Q 014454 358 DAEDGPPELLFIH-----GGHTSKISDFSWNPCEDWVISSVAEDNI----LQIWQMAEN 407 (424)
Q Consensus 358 ~~~~~~~~~~~~~-----~~h~~~v~~~~~~~~~~~~l~s~~~dg~----i~vw~~~~~ 407 (424)
+.+..+ .+|...|++++|+|++. ++++++.||. |.|||+...
T Consensus 393 -------~~~~~~~~~~~~~~~~~v~~~~~s~~~~-~la~~~~dg~~~~~l~v~df~~~ 443 (445)
T 2ovr_B 393 -------EFIRNLVTLESGGSGGVVWRIRASNTKL-VCAVGSRNGTEETKLLVLDFDVD 443 (445)
T ss_dssp -------CEEEEEEECTTGGGTCEEEEEEECSSEE-EEEEECSSSSSCCEEEEEECCCC
T ss_pred -------ceeeeeeccccCCCCceEEEEEecCCEE-EEEEcccCCCCccEEEEEECCCC
Confidence 334444 46788899999999998 7999999998 999999764
No 112
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=99.97 E-value=8.7e-30 Score=235.71 Aligned_cols=205 Identities=13% Similarity=0.114 Sum_probs=161.5
Q ss_pred cCCceeEEEecCCCCcE-EEEEeCCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCceeEEEecCCCCceEEEEeCCCc
Q 014454 124 HDGEVNRARYMPQNPFL-IATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDDAQ 202 (424)
Q Consensus 124 h~~~v~~~~~~p~~~~~-latg~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~ 202 (424)
+...+.+++|+|+|+.+ +|+++.|++|+|||+.+ ......+. |...|.+|+|+|++. +|++++.+ .
T Consensus 132 ~~~~~~~v~fSpDg~~la~as~~~d~~i~iwd~~~----------~~~~~~~~-~~~~V~~v~fspdg~-~l~s~s~~-~ 198 (365)
T 4h5i_A 132 ADDYTKLVYISREGTVAAIASSKVPAIMRIIDPSD----------LTEKFEIE-TRGEVKDLHFSTDGK-VVAYITGS-S 198 (365)
T ss_dssp TTCCEEEEEECTTSSCEEEEESCSSCEEEEEETTT----------TEEEEEEE-CSSCCCEEEECTTSS-EEEEECSS-C
T ss_pred cccCEEEEEEcCCCCEEEEEECCCCCEEEEeECCC----------CcEEEEeC-CCCceEEEEEccCCc-eEEeccce-e
Confidence 44568899999999854 34556789999999987 34455554 788999999999998 78888755 5
Q ss_pred EEEEeCCCCCCCCcccceeeeecCCccEeeEEEecCCCcEEEEEeCCC----eEEEEEcCCCCCC-CCeeeeeccCCCee
Q 014454 203 ICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQ----YLLIWDLRTPSVS-KPVQSVVAHQSEVN 277 (424)
Q Consensus 203 i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~dg----~i~i~d~~~~~~~-~~~~~~~~~~~~v~ 277 (424)
+++|+..++.. ........|...|.+++|+|++.. +++++.|+ .+++||+...... .....+..|...|+
T Consensus 199 ~~~~~~~~~~~----~~~~~~~~~~~~v~~v~fspdg~~-l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~ 273 (365)
T 4h5i_A 199 LEVISTVTGSC----IARKTDFDKNWSLSKINFIADDTV-LIAASLKKGKGIVLTKISIKSGNTSVLRSKQVTNRFKGIT 273 (365)
T ss_dssp EEEEETTTCCE----EEEECCCCTTEEEEEEEEEETTEE-EEEEEESSSCCEEEEEEEEETTEEEEEEEEEEESSCSCEE
T ss_pred EEEEEeccCcc----eeeeecCCCCCCEEEEEEcCCCCE-EEEEecCCcceeEEeecccccceecceeeeeecCCCCCeE
Confidence 66666655432 112334568889999999999875 45777666 6888998765421 11345567899999
Q ss_pred EEEecCCCCeEEEEEeCCCcEEEEECCCCCCcceEe-cCCCCCEEEEEEcCCCCcEEEEEECCCeEEEeeCCC
Q 014454 278 CLAFNPFNEWILATGSTDKTVKLFDLRKISTALHTF-DSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSR 349 (424)
Q Consensus 278 ~v~~~~~~~~~l~tg~~dg~i~iwd~~~~~~~~~~~-~~h~~~v~~~~~sp~~~~~l~s~~~dg~i~iwd~~~ 349 (424)
+++|+|++. +||+|+.|++|+|||+++ ++++..+ .+|..+|++++|+|+++ +||+|+.|++|+||++..
T Consensus 274 ~~~~Spdg~-~lasgs~D~~V~iwd~~~-~~~~~~~~~gH~~~V~~v~fSpdg~-~laS~S~D~tvrvw~ip~ 343 (365)
T 4h5i_A 274 SMDVDMKGE-LAVLASNDNSIALVKLKD-LSMSKIFKQAHSFAITEVTISPDST-YVASVSAANTIHIIKLPL 343 (365)
T ss_dssp EEEECTTSC-EEEEEETTSCEEEEETTT-TEEEEEETTSSSSCEEEEEECTTSC-EEEEEETTSEEEEEECCT
T ss_pred eEEECCCCC-ceEEEcCCCEEEEEECCC-CcEEEEecCcccCCEEEEEECCCCC-EEEEEeCCCeEEEEEcCC
Confidence 999999998 799999999999999998 6777764 78999999999999996 899999999999999964
No 113
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=99.97 E-value=4.2e-28 Score=219.78 Aligned_cols=243 Identities=23% Similarity=0.386 Sum_probs=193.9
Q ss_pred eeEEEecCCCCcEEEEEeCCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCceeEEEecCCCCceEEEEeCCCcEEEEe
Q 014454 128 VNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDDAQICLWD 207 (424)
Q Consensus 128 v~~~~~~p~~~~~latg~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~iwd 207 (424)
+++|+|++++ +||+|. |++|+|||+.+ +.......+.+|...|++++|+|++. +|++|+.||+|++||
T Consensus 28 ~~~l~WS~~~--~lAvg~-D~tV~iWd~~t--------g~~~~~~~~~~~~~~V~~v~~~~~~~-~l~sgs~Dg~v~iw~ 95 (318)
T 4ggc_A 28 LNLVDWSSGN--VLAVAL-DNSVYLWSASS--------GDILQLLQMEQPGEYISSVAWIKEGN-YLAVGTSSAEVQLWD 95 (318)
T ss_dssp CBCEEECTTS--EEEEEE-TTEEEEEETTT--------CCEEEEEECCSTTCCEEEEEECTTSS-EEEEEETTSEEEEEE
T ss_pred ceEEEECCCC--EEEEEe-CCEEEEEECCC--------CCEEEEEEecCCCCeEEEEEECCCCC-EEEEEECCCcEEEee
Confidence 5789999865 788865 89999999987 22222334457888999999999988 799999999999999
Q ss_pred CCCCCCCCcccceeeeecCCccEeeEEEecCCCcEEEEEeCCCeEEEEEcCCCCCCCCeeeeeccCCCeeEEEecCCCCe
Q 014454 208 INAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEW 287 (424)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~ 287 (424)
++++ +.+..+.+|...+.++.+.+ .++++++.++.+++|+...... .+..+.+|...+.++++++.+.
T Consensus 96 ~~~~------~~~~~~~~h~~~~~~~~~~~---~~l~s~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~- 163 (318)
T 4ggc_A 96 VQQQ------KRLRNMTSHSARVGSLSWNS---YILSSGSRSGHIHHHDVRVAEH--HVATLSGHSQEVCGLRWAPDGR- 163 (318)
T ss_dssp TTTT------EEEEEEECCSSCEEEEEEET---TEEEEEETTSEEEEEETTSSSC--EEEEEECCSSCEEEEEECTTSS-
T ss_pred cCCc------eeEEEecCccceEEEeecCC---CEEEEEecCCceEeeecCCCce--eEEEEcCccCceEEEEEcCCCC-
Confidence 9876 35667788998888877653 3678999999999999987653 4667788999999999999998
Q ss_pred EEEEEeCCCcEEEEECCCCC---CcceEecCCCCCEEEEEEcCCCCcEEE--EEECCCeEEEeeCCCCCcccCCCCcCCC
Q 014454 288 ILATGSTDKTVKLFDLRKIS---TALHTFDSHKEEVFQVGWNPKNETILA--SCCLGRRLMVWDLSRIDEEQTPEDAEDG 362 (424)
Q Consensus 288 ~l~tg~~dg~i~iwd~~~~~---~~~~~~~~h~~~v~~~~~sp~~~~~l~--s~~~dg~i~iwd~~~~~~~~~~~~~~~~ 362 (424)
+|++++.||.|++||+++.. ........|...|.+++++|.+..++. +++.++.|++||.....
T Consensus 164 ~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~~~~----------- 232 (318)
T 4ggc_A 164 HLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGA----------- 232 (318)
T ss_dssp EEEEEETTSCEEEEESSCBTTBSCCSEEECCCCSCEEEEEECTTSTTEEEEEECTTTCEEEEEETTTCC-----------
T ss_pred EEEEEecCcceeEEECCCCcccccceeeecccCCceEEEEecCCCCcEEEEEecCCCCEEEEEeccccc-----------
Confidence 69999999999999998732 234556678899999999998877654 45678999999988742
Q ss_pred CCeeeEEEcCCCCCcceEEeCCCCCcEEEE-EeCCCcEEEEecCCccC
Q 014454 363 PPELLFIHGGHTSKISDFSWNPCEDWVISS-VAEDNILQIWQMAENIY 409 (424)
Q Consensus 363 ~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s-~~~dg~i~vw~~~~~~~ 409 (424)
......+...+..+.|+|++..++++ ++.|+.|+|||+.++..
T Consensus 233 ----~~~~~~~~~~v~~~~~~~~~~~~~~~sg~~d~~i~iwd~~~~~~ 276 (318)
T 4ggc_A 233 ----CLSAVDAHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAK 276 (318)
T ss_dssp ----EEEEEECSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCE
T ss_pred ----ccccccceeeeeeeeecccccceEEEEEcCCCEEEEEECCCCcE
Confidence 22233456679999999999965443 34799999999987643
No 114
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.97 E-value=5.1e-28 Score=226.04 Aligned_cols=251 Identities=12% Similarity=0.077 Sum_probs=197.5
Q ss_pred EEEeccCCceeEEEecCCCCcEEEEEeCCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCceeEEEecCCCCceEEEEe
Q 014454 119 IQQINHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGS 198 (424)
Q Consensus 119 ~~~~~h~~~v~~~~~~p~~~~~latg~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~ 198 (424)
...+.+...+.+++|+|++..++++++.++.|++||+.+ .+....+..+. .+.+++|+|++..++++++
T Consensus 25 ~~~~~~~~~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~----------~~~~~~~~~~~-~v~~~~~spdg~~l~~~~~ 93 (391)
T 1l0q_A 25 TATIPVGSNPMGAVISPDGTKVYVANAHSNDVSIIDTAT----------NNVIATVPAGS-SPQGVAVSPDGKQVYVTNM 93 (391)
T ss_dssp EEEEECSSSEEEEEECTTSSEEEEEEGGGTEEEEEETTT----------TEEEEEEECSS-SEEEEEECTTSSEEEEEET
T ss_pred EEEeecCCCcceEEECCCCCEEEEECCCCCeEEEEECCC----------CeEEEEEECCC-CccceEECCCCCEEEEEEC
Confidence 345556667999999999986778888999999999976 34445555444 8999999999985446666
Q ss_pred CCCcEEEEeCCCCCCCCcccceeeeecCCccEeeEEEecCCCcEEEEEeCCCeEEEEEcCCCCCCCCeeeeeccCCCeeE
Q 014454 199 DDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNC 278 (424)
Q Consensus 199 ~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~ 278 (424)
.++.|++||+.+++ .+..+. +...+.+++|+|+++.++++++.++.|++||+++++. +..+.. ...+.+
T Consensus 94 ~~~~v~v~d~~~~~------~~~~~~-~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~---~~~~~~-~~~~~~ 162 (391)
T 1l0q_A 94 ASSTLSVIDTTSNT------VAGTVK-TGKSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAV---INTVSV-GRSPKG 162 (391)
T ss_dssp TTTEEEEEETTTTE------EEEEEE-CSSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEE---EEEEEC-CSSEEE
T ss_pred CCCEEEEEECCCCe------EEEEEe-CCCCcceEEECCCCCEEEEEeCCCCEEEEEECCCCcE---EEEEec-CCCcce
Confidence 78999999998763 233344 4457899999999988878899999999999988653 444444 456799
Q ss_pred EEecCCCCeEEEEEeCCCcEEEEECCCCCCcceEecCCCCCEEEEEEcCCCCcEEEEEE---CCCeEEEeeCCCCCcccC
Q 014454 279 LAFNPFNEWILATGSTDKTVKLFDLRKISTALHTFDSHKEEVFQVGWNPKNETILASCC---LGRRLMVWDLSRIDEEQT 355 (424)
Q Consensus 279 v~~~~~~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~l~s~~---~dg~i~iwd~~~~~~~~~ 355 (424)
++|+|+++.++++++.++.|++||+++ .+.+..+. +...+.+++|+|++.. |++++ .++.|++||+..+
T Consensus 163 ~~~~~dg~~l~~~~~~~~~v~~~d~~~-~~~~~~~~-~~~~~~~~~~~~~g~~-l~~~~~~~~~~~v~~~d~~~~----- 234 (391)
T 1l0q_A 163 IAVTPDGTKVYVANFDSMSISVIDTVT-NSVIDTVK-VEAAPSGIAVNPEGTK-AYVTNVDKYFNTVSMIDTGTN----- 234 (391)
T ss_dssp EEECTTSSEEEEEETTTTEEEEEETTT-TEEEEEEE-CSSEEEEEEECTTSSE-EEEEEECSSCCEEEEEETTTT-----
T ss_pred EEECCCCCEEEEEeCCCCEEEEEECCC-CeEEEEEe-cCCCccceEECCCCCE-EEEEecCcCCCcEEEEECCCC-----
Confidence 999999997668888999999999997 55555555 4668999999999975 55555 7899999999864
Q ss_pred CCCcCCCCCeeeEEEcCCCCCcceEEeCCCCCcEEEEEeCCCcEEEEecCCccC
Q 014454 356 PEDAEDGPPELLFIHGGHTSKISDFSWNPCEDWVISSVAEDNILQIWQMAENIY 409 (424)
Q Consensus 356 ~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~ 409 (424)
..+..+..|. .+.+++|+|++++++++++.|+.|++||+.++.+
T Consensus 235 ---------~~~~~~~~~~-~~~~~~~s~dg~~l~~s~~~d~~v~v~d~~~~~~ 278 (391)
T 1l0q_A 235 ---------KITARIPVGP-DPAGIAVTPDGKKVYVALSFXNTVSVIDTATNTI 278 (391)
T ss_dssp ---------EEEEEEECCS-SEEEEEECTTSSEEEEEETTTTEEEEEETTTTEE
T ss_pred ---------eEEEEEecCC-CccEEEEccCCCEEEEEcCCCCEEEEEECCCCcE
Confidence 4455555554 4789999999997668889999999999987643
No 115
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.97 E-value=2.6e-27 Score=218.35 Aligned_cols=251 Identities=12% Similarity=0.149 Sum_probs=181.7
Q ss_pred ceeEEEecCCCCcEEEEEeCCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCceeEEEecCCCCceEEEEeCCCcEEEE
Q 014454 127 EVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDDAQICLW 206 (424)
Q Consensus 127 ~v~~~~~~p~~~~~latg~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~iw 206 (424)
.+..+++.+.+..++++|+.++.|+|||..+ ......+. |...|.+++|+++ .++++ .|+.|++|
T Consensus 60 ~~~~~~~~~~~~~~~~~~~~d~~v~iWd~~~----------~~~~~~~~-~~~~v~~v~~~~~---~~~~~-~~~~i~i~ 124 (355)
T 3vu4_A 60 HLSKVRMLHRTNYVAFVTGVKEVVHIWDDVK----------KQDVSRIK-VDAPVKDLFLSRE---FIVVS-YGDVISVF 124 (355)
T ss_dssp CCCEEEECTTSSEEEEECSSTTEEEEEETTT----------TEEEEEEE-CSSCEEEEEECSS---EEEEE-ETTEEEEE
T ss_pred CeEEEEEcCCCCEEEEEECCccEEEEEECCC----------CcEEEEEE-CCCceEEEEEcCC---EEEEE-EcCEEEEE
Confidence 5788889888776667788899999999987 34455555 6779999999874 34444 47899999
Q ss_pred eCCCC-CCCCcccceeeeecCCccEeeEEEecCCCcEEEE-EeCCCeEEEEEcCCCCC------------CCC-eeeeec
Q 014454 207 DINAA-PKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGS-VGDDQYLLIWDLRTPSV------------SKP-VQSVVA 271 (424)
Q Consensus 207 d~~~~-~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s-~~~dg~i~i~d~~~~~~------------~~~-~~~~~~ 271 (424)
|+.+. +.... +.. +...+++++ ..++++ |+.||.|++||++++.. ..+ +..+.+
T Consensus 125 d~~~~~~~~~~------~~~---~~~~~~~s~--~~la~~sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~ 193 (355)
T 3vu4_A 125 KFGNPWKRITD------DIR---FGGVCEFSN--GLLVYSNEFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKA 193 (355)
T ss_dssp ESSTTCCBSSC------CEE---EEEEEEEET--TEEEEEESSCTTCEEEEECCC------------------CCEEECC
T ss_pred ECCCCceeeEE------ecc---CCceEEEEc--cEEEEeCCCcCcEEEEEECCCCCccccccccccccccCcccEEEEc
Confidence 99876 32222 222 344556666 334333 68999999999987541 112 677889
Q ss_pred cCCCeeEEEecCCCCeEEEEEeCCCc-EEEEECCCCCCcceEec-C-CCCCEEEEEEcCCCCcEEEEEECCCeEEEeeCC
Q 014454 272 HQSEVNCLAFNPFNEWILATGSTDKT-VKLFDLRKISTALHTFD-S-HKEEVFQVGWNPKNETILASCCLGRRLMVWDLS 348 (424)
Q Consensus 272 ~~~~v~~v~~~~~~~~~l~tg~~dg~-i~iwd~~~~~~~~~~~~-~-h~~~v~~~~~sp~~~~~l~s~~~dg~i~iwd~~ 348 (424)
|...|++++|+|++. +||+|+.||+ |++||+++ ++++..+. + |...|.+++|+|++. +|++++.|+.|+|||++
T Consensus 194 h~~~v~~~~~s~~g~-~l~s~s~d~~~v~iwd~~~-~~~~~~~~~g~h~~~v~~~~~s~~~~-~l~s~s~d~~v~iw~~~ 270 (355)
T 3vu4_A 194 HTNPIKMVRLNRKSD-MVATCSQDGTIIRVFKTED-GVLVREFRRGLDRADVVDMKWSTDGS-KLAVVSDKWTLHVFEIF 270 (355)
T ss_dssp CSSCEEEEEECTTSS-EEEEEETTCSEEEEEETTT-CCEEEEEECTTCCSCEEEEEECTTSC-EEEEEETTCEEEEEESS
T ss_pred cCCceEEEEECCCCC-EEEEEeCCCCEEEEEECCC-CcEEEEEEcCCCCCcEEEEEECCCCC-EEEEEECCCEEEEEEcc
Confidence 999999999999988 7999999998 99999998 67888887 5 999999999999996 79999999999999998
Q ss_pred CCCcccCCCC---------cCCCCCeeeEEEcCCCCCcceEEeCCCCCcEEEEEeCCCcEEEEecCCc
Q 014454 349 RIDEEQTPED---------AEDGPPELLFIHGGHTSKISDFSWNPCEDWVISSVAEDNILQIWQMAEN 407 (424)
Q Consensus 349 ~~~~~~~~~~---------~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~ 407 (424)
.......... ..............+......++|++++. .|++++.||.+++|++..+
T Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~d~~-~l~~~~~dg~~~~~~~~~~ 337 (355)
T 3vu4_A 271 NDQDNKRHALKGWINMKYFQSEWSLCNFKLSVDKHVRGCKIAWISESS-LVVVWPHTRMIETFKVVFD 337 (355)
T ss_dssp CCSCCCSEETTTTEECCCCCCSSCSEEEECCCCTTCCCCEEEESSSSE-EEEEETTTTEEEEEEEEEE
T ss_pred CCCCcccccccceeeccccccccceeEEEeccCCCCCceEEEEeCCCC-EEEEEeCCCeEEEEEEEcC
Confidence 6532211000 00000011111112223347799999999 6888999999999998764
No 116
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.97 E-value=1.1e-28 Score=249.41 Aligned_cols=253 Identities=16% Similarity=0.222 Sum_probs=198.9
Q ss_pred CccEEEEccCCCCCCCCCCceEEEEEeecCCCCCCCeEEEEEEECCCCCCCcccCCCCCcCCCCCCCCCCCCcEE-EEEE
Q 014454 43 PSLTVEWLPDREEPPGKDYSVQKMILGTHTSENEPNYLMLAQVQLPLDDSENDARHYDDDRSDFGGFGCANGKVQ-IIQQ 121 (424)
Q Consensus 43 p~~~~~~~p~~~~~~~~~~~~~~~~~gt~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 121 (424)
+..++.|.|+. ..++.|+ .+..|+++.+.- +... +...
T Consensus 11 ~V~~l~~s~dg----------~~latg~-----~dg~I~vwd~~~--------------------------~~~~~~~~l 49 (753)
T 3jro_A 11 LIHDAVLDYYG----------KRLATCS-----SDKTIKIFEVEG--------------------------ETHKLIDTL 49 (753)
T ss_dssp CEEEECCCSSS----------CCEEEEE-----TTTEEEEEEEET--------------------------TEEEEEEEE
T ss_pred eeEEEEECCCC----------CeEEEEE-----CCCcEEEEecCC--------------------------CCCccceec
Confidence 47788888875 3455555 356788887741 1122 2334
Q ss_pred eccCCceeEEEecCC--CCcEEEEEeCCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCceeEEEecCC--CCceEEEE
Q 014454 122 INHDGEVNRARYMPQ--NPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKF--KEGHLLSG 197 (424)
Q Consensus 122 ~~h~~~v~~~~~~p~--~~~~latg~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~--~~~~l~s~ 197 (424)
.+|.+.|++++|+|+ + .+|++|+.||.|++||+.. +.......+.+|...|.+++|+|+ +. +|++|
T Consensus 50 ~~h~~~V~~l~~s~~~~~-~~l~s~s~Dg~I~vwd~~~--------~~~~~~~~~~~h~~~V~~v~~sp~~~~~-~l~sg 119 (753)
T 3jro_A 50 TGHEGPVWRVDWAHPKFG-TILASCSYDGKVLIWKEEN--------GRWSQIAVHAVHSASVNSVQWAPHEYGP-LLLVA 119 (753)
T ss_dssp CCCSSCEEEEEECCTTSC-SEEEEEETTSCEEEEEEET--------TEEEEEEEECCCSSCEEEEEECCGGGCS-EEEEE
T ss_pred cCCcCceEEEEecCCCCC-CEEEEEeCCCeEEEEECCC--------CcccccccccCCCCCeEEEEECCCCCCC-EEEEE
Confidence 479999999999987 5 4899999999999999987 222356778889999999999998 66 89999
Q ss_pred eCCCcEEEEeCCCCCCCCcccceeeeecCCccEeeEEEecC------------CCcEEEEEeCCCeEEEEEcCCCCCC-C
Q 014454 198 SDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLR------------HEYLFGSVGDDQYLLIWDLRTPSVS-K 264 (424)
Q Consensus 198 ~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~------------~~~~~~s~~~dg~i~i~d~~~~~~~-~ 264 (424)
+.||.|++||++..... ....+.+|...|.+++|+|. +..++++|+.||.|++||++++... .
T Consensus 120 s~dg~I~vwdl~~~~~~----~~~~~~~~~~~v~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~ 195 (753)
T 3jro_A 120 SSDGKVSVVEFKENGTT----SPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYV 195 (753)
T ss_dssp ETTSEEEEEECCSSSCC----CCEEEECCSSCEEEEEECCCC---------CGGGCCEEEEETTSCEEEEEEETTTTEEE
T ss_pred eCCCcEEEEEeecCCCc----ceeEeecCCCceEEEEecCcccccccccccCCCCCEEEEEECCCeEEEEeccCCcccce
Confidence 99999999999876432 23345679999999999995 2345679999999999999986431 2
Q ss_pred CeeeeeccCCCeeEEEecCCC--CeEEEEEeCCCcEEEEECCCCCC----cceEecCCCCCEEEEEEcCCCCcEEEEEEC
Q 014454 265 PVQSVVAHQSEVNCLAFNPFN--EWILATGSTDKTVKLFDLRKIST----ALHTFDSHKEEVFQVGWNPKNETILASCCL 338 (424)
Q Consensus 265 ~~~~~~~~~~~v~~v~~~~~~--~~~l~tg~~dg~i~iwd~~~~~~----~~~~~~~h~~~v~~~~~sp~~~~~l~s~~~ 338 (424)
....+.+|...|++++|+|++ ..+|++|+.||.|++||++.... .+.....|...|++++|+|++. +|++++.
T Consensus 196 ~~~~~~~h~~~V~~l~~sp~~~~~~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~-~l~s~s~ 274 (753)
T 3jro_A 196 LESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGN-VLALSGG 274 (753)
T ss_dssp EEEEECCCSSCEEEEEECCCCSSSEEEEEEESSSCEEEEEESSSSSCCBCCBSSSSCCSSCCCCEEECTTTC-CEEEECS
T ss_pred eeeeecCCCCcEEEEEeccCCCCCCEEEEEecCCEEEEecCCCCCCcceeEEeccCCCCCceEEEEEcCCCC-EEEEEcC
Confidence 345667899999999999993 34799999999999999997421 3344456889999999999996 6899999
Q ss_pred CCeEEEeeCCCCC
Q 014454 339 GRRLMVWDLSRID 351 (424)
Q Consensus 339 dg~i~iwd~~~~~ 351 (424)
||.|++|++....
T Consensus 275 Dg~I~vwd~~~~~ 287 (753)
T 3jro_A 275 DNKVTLWKENLEG 287 (753)
T ss_dssp SSCEECCBCCSSS
T ss_pred CCEEEEEecCCCC
Confidence 9999999998543
No 117
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=99.97 E-value=7.1e-28 Score=222.67 Aligned_cols=215 Identities=16% Similarity=0.262 Sum_probs=182.9
Q ss_pred CCCCCcEEEecCCCceeEEEecCCCCceEEEEeCCCcEEEEeCCCCCCCCcccceeeeecCCccEeeEEEecCCCcEEEE
Q 014454 166 GACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGS 245 (424)
Q Consensus 166 ~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s 245 (424)
+.......+.+|...|++++|+|++. +|++|+.||.|++||+.++ ..+..+.+|...|.+++|+|++. +|++
T Consensus 20 G~~~~~~~l~~h~~~v~~~~~s~~~~-~l~~~~~dg~i~vwd~~~~------~~~~~~~~h~~~v~~~~~~~~~~-~l~s 91 (369)
T 3zwl_B 20 GSHMKAIKLTGHERPLTQVKYNKEGD-LLFSCSKDSSASVWYSLNG------ERLGTLDGHTGTIWSIDVDCFTK-YCVT 91 (369)
T ss_dssp CCSEEEEEEECCSSCEEEEEECTTSC-EEEEEESSSCEEEEETTTC------CEEEEECCCSSCEEEEEECTTSS-EEEE
T ss_pred ccccccEEEEEeeceEEEEEEcCCCC-EEEEEeCCCEEEEEeCCCc------hhhhhhhhcCCcEEEEEEcCCCC-EEEE
Confidence 34445567899999999999999887 8999999999999999876 34566778999999999999886 5679
Q ss_pred EeCCCeEEEEEcCCCCCCCCeeeeeccCCCeeEEEecCCCCeEEEEEeCC-----CcEEEEECCCCC----------Ccc
Q 014454 246 VGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATGSTD-----KTVKLFDLRKIS----------TAL 310 (424)
Q Consensus 246 ~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~l~tg~~d-----g~i~iwd~~~~~----------~~~ 310 (424)
++.||.|++||+++++. +..+. +...+.+++|+|++. +|++++.+ |.|++||++... .++
T Consensus 92 ~~~dg~i~iwd~~~~~~---~~~~~-~~~~v~~~~~~~~~~-~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~ 166 (369)
T 3zwl_B 92 GSADYSIKLWDVSNGQC---VATWK-SPVPVKRVEFSPCGN-YFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPI 166 (369)
T ss_dssp EETTTEEEEEETTTCCE---EEEEE-CSSCEEEEEECTTSS-EEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCS
T ss_pred EeCCCeEEEEECCCCcE---EEEee-cCCCeEEEEEccCCC-EEEEecCCccCCCCEEEEEEecCCccceeeccccccee
Confidence 99999999999998664 55544 888999999999998 58888888 999999998633 245
Q ss_pred eEecCCCC--CEEEEEEcCCCCcEEEEEECCCeEEEeeCCCCCcccCCCCcCCCCCeeeEEEcCCCCCcceEEeCCCCCc
Q 014454 311 HTFDSHKE--EVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPEDAEDGPPELLFIHGGHTSKISDFSWNPCEDW 388 (424)
Q Consensus 311 ~~~~~h~~--~v~~~~~sp~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~ 388 (424)
..+..|.. .+.+++|+|++. +|++++.||.|++||++.. ...+..+..|...|.+++|+|++.
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~-~l~~~~~dg~i~i~d~~~~-------------~~~~~~~~~~~~~v~~~~~~~~~~- 231 (369)
T 3zwl_B 167 HKIITHEGLDAATVAGWSTKGK-YIIAGHKDGKISKYDVSNN-------------YEYVDSIDLHEKSISDMQFSPDLT- 231 (369)
T ss_dssp EEEECCTTCCCEEEEEECGGGC-EEEEEETTSEEEEEETTTT-------------TEEEEEEECCSSCEEEEEECTTSS-
T ss_pred eeccCCcCccceeEEEEcCCCC-EEEEEcCCCEEEEEECCCC-------------cEeEEEEecCCCceeEEEECCCCC-
Confidence 55666666 999999999986 7999999999999999863 156777888999999999999999
Q ss_pred EEEEEeCCCcEEEEecCCcc
Q 014454 389 VISSVAEDNILQIWQMAENI 408 (424)
Q Consensus 389 ~l~s~~~dg~i~vw~~~~~~ 408 (424)
+|++++.|+.|++||+.++.
T Consensus 232 ~l~~~~~d~~i~v~d~~~~~ 251 (369)
T 3zwl_B 232 YFITSSRDTNSFLVDVSTLQ 251 (369)
T ss_dssp EEEEEETTSEEEEEETTTCC
T ss_pred EEEEecCCceEEEEECCCCc
Confidence 68899999999999998764
No 118
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.97 E-value=7.1e-28 Score=213.53 Aligned_cols=257 Identities=11% Similarity=0.094 Sum_probs=175.0
Q ss_pred CCCcEEEEEEeccCC-----ceeEEEecCCC--CcEEEEEeCCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCC-----
Q 014454 112 ANGKVQIIQQINHDG-----EVNRARYMPQN--PFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHST----- 179 (424)
Q Consensus 112 ~~~~~~~~~~~~h~~-----~v~~~~~~p~~--~~~latg~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~h~~----- 179 (424)
..+.++++.++..+. .+.++.|-..+ ...+++++ ...|++|+.... .+++...++.+|..
T Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~v~lw~~~~~-------~~~~~~~~~~~~~~~v~~~ 92 (356)
T 2w18_A 21 NPGNLQLVSELKNPSGSCSVDVSAMFWERAGCKEPCIITAC-EDVVSLWKALDA-------WQWEKLYTWHFAEVPVLQI 92 (356)
T ss_dssp ---CEEEEEEECCCCSSCEEEEEEEEEC----CEEEEEEEE-SSEEEEEEESSS-------SBEEEEEEEECCSSCEEEE
T ss_pred CcceeeeeehhcCCCCCeEEEEeeeeeccCCCCccEEEEec-cceEEEcccCCC-------ccceeeEEEeccCceeEEE
Confidence 356788888887654 34455554433 22566666 468999998872 12344555555554
Q ss_pred --------------------ceeEEEecCC----CCceEEEEeC--------------------CCcEEEEeCCCCCCCC
Q 014454 180 --------------------EGYGLSWSKF----KEGHLLSGSD--------------------DAQICLWDINAAPKNK 215 (424)
Q Consensus 180 --------------------~v~~l~~~~~----~~~~l~s~~~--------------------dg~i~iwd~~~~~~~~ 215 (424)
.|.+|+++|+ +. .+++++. |+.|++|++....
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~v~sla~spd~~~~~~-~l~s~g~~~~v~~l~~g~lv~ss~~g~d~~V~~~~~s~dG--- 168 (356)
T 2w18_A 93 VPVPDVYNLVCVALGNLEIREIRALFCSSDDESEKQ-VLLKSGNIKAVLGLTKRRLVSSSGTLSDQQVEVMTFAEDG--- 168 (356)
T ss_dssp CCCTTCCSCEEEEECSSSEEEEEEECC------CCE-EEEEEEEEEEEEEETTTEEEEEESSSTTCEEEEEEECTTS---
T ss_pred EEcCcccceeeeeeccccccceEEEEECCCcccccc-EEEeCCCeEEEEecCCCcEEEecccCCCCcEEEEEECCCC---
Confidence 4566666776 44 4555442 7778888874321
Q ss_pred cccceeeeecCCccEeeEEEec---CCCcEEEEEeCCCeEEEEEcCCCCCCCCeeeeeccC---CCeeEEEecCCCCeE-
Q 014454 216 SLEAMQIFKVHEGVVEDVAWHL---RHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQ---SEVNCLAFNPFNEWI- 288 (424)
Q Consensus 216 ~~~~~~~~~~~~~~v~~~~~~~---~~~~~~~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~---~~v~~v~~~~~~~~~- 288 (424)
+.+..+..|...++.++|++ ++ .+|++++.|++|+|||+++++. +.++.+|. ..+.+++|+|++..+
T Consensus 169 --~~~~s~~~~~~~v~~l~fs~~~g~~-~~LaSgS~D~TIkIWDl~TGk~---l~tL~g~~~~v~~v~~vafSpdG~~lv 242 (356)
T 2w18_A 169 --GGKENQFLMPPEETILTFAEVQGMQ-EALLGTTIMNNIVIWNLKTGQL---LKKMHIDDSYQASVCHKAYSEMGLLFI 242 (356)
T ss_dssp --CEEEEEEECCCSSCEEEEEEEETST-TEEEEEETTSEEEEEETTTCCE---EEEEECCC---CCCEEEEEEETTEEEE
T ss_pred --ceeeeeccCCCceeeEEeeccCCCC-ceEEEecCCCcEEEEECCCCcE---EEEEcCCCcceeeeEEEEECCCCCEEE
Confidence 23445567888888888888 44 4778999999999999999774 66666543 467788999988743
Q ss_pred ----------EEEEeCCCcEEEEECCCCCCcceEe-----cCCCCCEEEEEEcCCCCcEEEEEECCCeEEEeeCCCCCcc
Q 014454 289 ----------LATGSTDKTVKLFDLRKISTALHTF-----DSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEE 353 (424)
Q Consensus 289 ----------l~tg~~dg~i~iwd~~~~~~~~~~~-----~~h~~~v~~~~~sp~~~~~l~s~~~dg~i~iwd~~~~~~~ 353 (424)
+++|+.|++|++||..+ ++.+..+ .+|...+.+..++ + .++|+++.|++|+|||+.++
T Consensus 243 s~s~~~~~w~laSGs~D~tIklWd~~t-gk~l~v~~~~~p~Gh~~~~lsg~~s--g-~~lASgS~DgTIkIWDl~tG--- 315 (356)
T 2w18_A 243 VLSHPCAKESESLRSPVFQLIVINPKT-TLSVGVMLYCLPPGQAGRFLEGDVK--D-HCAAAILTSGTIAIWDLLLG--- 315 (356)
T ss_dssp EEC------------CCEEEEEEETTT-TEEEEEEEECCCTTCCCCEEEEEEE--T-TEEEEEETTSCEEEEETTTC---
T ss_pred EeccCCCcceeeccCCCcEEEEEECCC-CEEEEEEEeeccCCCcceeEccccC--C-CEEEEEcCCCcEEEEECCCC---
Confidence 36788999999999987 5655544 3666666555555 4 47999999999999999886
Q ss_pred cCCCCcCCCCCeeeEEEcCCCCCcc-eEEeCCCCCcEEEEEeCCCcEEEEecC
Q 014454 354 QTPEDAEDGPPELLFIHGGHTSKIS-DFSWNPCEDWVISSVAEDNILQIWQMA 405 (424)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~~h~~~v~-~~~~~~~~~~~l~s~~~dg~i~vw~~~ 405 (424)
+++.++.+|...+. .++|+|+++ +|++|+.|++|+|||+.
T Consensus 316 -----------k~l~tL~gH~~~vvs~vafSPDG~-~LaSGS~D~TIklWd~~ 356 (356)
T 2w18_A 316 -----------QCTALLPPVSDQHWSFVKWSGTDS-HLLAGQKDGNIFVYHYS 356 (356)
T ss_dssp -----------SEEEEECCC--CCCCEEEECSSSS-EEEEECTTSCEEEEEEC
T ss_pred -----------cEEEEecCCCCCeEEEEEECCCCC-EEEEEECCCcEEEecCC
Confidence 66778888987666 589999999 69999999999999963
No 119
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.96 E-value=1.3e-27 Score=219.40 Aligned_cols=244 Identities=10% Similarity=0.078 Sum_probs=174.8
Q ss_pred CCceeEEEecCCCCcEEEEEeCCCeEEEEeCCCCCCCCCCCCCCCCcEEE-ecCCCceeEEEecC--CCCceEEEEeCCC
Q 014454 125 DGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRL-RGHSTEGYGLSWSK--FKEGHLLSGSDDA 201 (424)
Q Consensus 125 ~~~v~~~~~~p~~~~~latg~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~-~~h~~~v~~l~~~~--~~~~~l~s~~~dg 201 (424)
...|.++.|+|. +++|+.|++|++|+.......... ......... .+|...|.+++|+| ++. +|++|+.||
T Consensus 76 ~~~v~~~~~~~~----~~s~s~D~~i~~w~~~~~~~~~~~-~~~~~~~~~~~~~~~~v~~~~~~~~~~~~-~l~s~s~dg 149 (343)
T 3lrv_A 76 TPNPRTGGEHPA----IISRGPCNRLLLLYPGNQITILDS-KTNKVLREIEVDSANEIIYMYGHNEVNTE-YFIWADNRG 149 (343)
T ss_dssp EECCCTTCCCCS----EEEECSTTEEEEEETTTEEEEEET-TTCCEEEEEECCCSSCEEEEECCC---CC-EEEEEETTC
T ss_pred cCCceeeeeCCc----eEEecCCCeEEEEEccCceEEeec-CCcceeEEeecCCCCCEEEEEcCCCCCCC-EEEEEeCCC
Confidence 457888899986 889999999999987641000000 001212233 36778999999999 887 799999999
Q ss_pred cEEEEeCCCCCCCCcccceeee-ecCCccEeeEEEecCCCcEEEEEeCCCeEEEEEcCCCCCCCCeeeeec-cCCCeeEE
Q 014454 202 QICLWDINAAPKNKSLEAMQIF-KVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVA-HQSEVNCL 279 (424)
Q Consensus 202 ~i~iwd~~~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~~s~~~dg~i~i~d~~~~~~~~~~~~~~~-~~~~v~~v 279 (424)
.|++||++++.. .... ..|...+.+++|+|++. +|++|+.||.|++||++++.. ....+.. |..+|+++
T Consensus 150 ~i~~wd~~~~~~------~~~~~~~~~~~i~~~~~~pdg~-~lasg~~dg~i~iwd~~~~~~--~~~~~~~~h~~~v~~l 220 (343)
T 3lrv_A 150 TIGFQSYEDDSQ------YIVHSAKSDVEYSSGVLHKDSL-LLALYSPDGILDVYNLSSPDQ--ASSRFPVDEEAKIKEV 220 (343)
T ss_dssp CEEEEESSSSCE------EEEECCCSSCCCCEEEECTTSC-EEEEECTTSCEEEEESSCTTS--CCEECCCCTTSCEEEE
T ss_pred cEEEEECCCCcE------EEEEecCCCCceEEEEECCCCC-EEEEEcCCCEEEEEECCCCCC--CccEEeccCCCCEEEE
Confidence 999999987632 2222 23556899999999986 677999999999999998764 1155666 99999999
Q ss_pred EecCCCCeEEEEEeCCCcEEEEECCCCCCcceEecC---CCCCEE--EEEEcCCCCcEEEEEEC-CCeEEEeeCCCCCcc
Q 014454 280 AFNPFNEWILATGSTDKTVKLFDLRKISTALHTFDS---HKEEVF--QVGWNPKNETILASCCL-GRRLMVWDLSRIDEE 353 (424)
Q Consensus 280 ~~~~~~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~~---h~~~v~--~~~~sp~~~~~l~s~~~-dg~i~iwd~~~~~~~ 353 (424)
+|+|++. +|++++ ++.|++||+++ ...+..+.. |...+. +++|+|+++ +|++++. |+.|+||++.....
T Consensus 221 ~fs~~g~-~l~s~~-~~~v~iwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-~l~~~s~~d~~i~v~~~~~~~~- 295 (343)
T 3lrv_A 221 KFADNGY-WMVVEC-DQTVVCFDLRK-DVGTLAYPTYTIPEFKTGTVTYDIDDSGK-NMIAYSNESNSLTIYKFDKKTK- 295 (343)
T ss_dssp EECTTSS-EEEEEE-SSBEEEEETTS-STTCBSSCCCBC-----CCEEEEECTTSS-EEEEEETTTTEEEEEEECTTTC-
T ss_pred EEeCCCC-EEEEEe-CCeEEEEEcCC-CCcceeecccccccccccceEEEECCCCC-EEEEecCCCCcEEEEEEccccc-
Confidence 9999988 688888 55999999998 444444433 444444 699999996 7888888 99999999975421
Q ss_pred cCCCCcCCCCCeeeEEEcCCCCCcceEEeCC---CCCcEEEEEeCCCcEEEEecCC
Q 014454 354 QTPEDAEDGPPELLFIHGGHTSKISDFSWNP---CEDWVISSVAEDNILQIWQMAE 406 (424)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~---~~~~~l~s~~~dg~i~vw~~~~ 406 (424)
.... ..+..++|.+ +.. .+++++.|+.+.++-...
T Consensus 296 -------------~~~~----~~~~~~~~~~~~~~~~-~l~~~~~d~~~~~~~~~~ 333 (343)
T 3lrv_A 296 -------------NWTK----DEESALCLQSDTADFT-DMDVVCGDGGIAAILKTN 333 (343)
T ss_dssp -------------SEEE----EEEEECCC----CCCC-EEEEEEETTEEEEEEECS
T ss_pred -------------ceEe----cCceeEecCccccccc-eeEEEecCCceEEEEecC
Confidence 1111 3466777887 667 577778888888875544
No 120
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.96 E-value=6.2e-27 Score=221.73 Aligned_cols=244 Identities=11% Similarity=0.113 Sum_probs=191.8
Q ss_pred ccCCceeEEEecCCCCcEEEEEeCCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCceeEEEecCCCCceEEEEeCCCc
Q 014454 123 NHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDDAQ 202 (424)
Q Consensus 123 ~h~~~v~~~~~~p~~~~~latg~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~ 202 (424)
.|.+.|.+++|+|++. ++++++.++.|++||+.. ......+..|...+.+++|+|++..++++++.|+.
T Consensus 167 ~~~~~v~~~~~~~~~~-~~~s~~~d~~v~~~d~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 235 (433)
T 3bws_A 167 KKLGFVETISIPEHNE-LWVSQMQANAVHVFDLKT----------LAYKATVDLTGKWSKILLYDPIRDLVYCSNWISED 235 (433)
T ss_dssp TTCCEEEEEEEGGGTE-EEEEEGGGTEEEEEETTT----------CCEEEEEECSSSSEEEEEEETTTTEEEEEETTTTE
T ss_pred ccCCceeEEEEcCCCE-EEEEECCCCEEEEEECCC----------ceEEEEEcCCCCCeeEEEEcCCCCEEEEEecCCCc
Confidence 5788999999999775 899999999999999976 45566777899999999999998854466668999
Q ss_pred EEEEeCCCCCCCCcccceeeeecCCccEeeEEEecCCCcEEEEEe-------CCCeEEEEEcCCCCCCCCeeeeeccCCC
Q 014454 203 ICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVG-------DDQYLLIWDLRTPSVSKPVQSVVAHQSE 275 (424)
Q Consensus 203 i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~-------~dg~i~i~d~~~~~~~~~~~~~~~~~~~ 275 (424)
|++||++++. .+..+.. ...+.+++|+|++..+++++. .||.|++||+++++. +. ...+...
T Consensus 236 i~~~d~~~~~------~~~~~~~-~~~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~---~~-~~~~~~~ 304 (433)
T 3bws_A 236 ISVIDRKTKL------EIRKTDK-IGLPRGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMDKEKL---ID-TIGPPGN 304 (433)
T ss_dssp EEEEETTTTE------EEEECCC-CSEEEEEEECTTSSEEEEEEEESCTTCSCCEEEEEEETTTTEE---EE-EEEEEEC
T ss_pred EEEEECCCCc------EEEEecC-CCCceEEEEcCCCCEEEEEECCCCccccCCCeEEEEECCCCcE---Ee-eccCCCC
Confidence 9999997652 2333333 456999999999986654432 588999999987653 32 2345668
Q ss_pred eeEEEecCCCCeEEEEEeCCCcEEEEECCCCCCcceEecCCCCCEEEEEEcCCCCcEEEEEEC---------------CC
Q 014454 276 VNCLAFNPFNEWILATGSTDKTVKLFDLRKISTALHTFDSHKEEVFQVGWNPKNETILASCCL---------------GR 340 (424)
Q Consensus 276 v~~v~~~~~~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~l~s~~~---------------dg 340 (424)
+.+++|+|+++.++++++.++.|++||+++ ++.+..+. +...+.+++|+|+++ +|++++. ||
T Consensus 305 ~~~~~~~~~g~~l~~~~~~~~~v~v~d~~~-~~~~~~~~-~~~~~~~~~~s~dg~-~l~~~~~~~~~~~~~~~~~g~~dg 381 (433)
T 3bws_A 305 KRHIVSGNTENKIYVSDMCCSKIEVYDLKE-KKVQKSIP-VFDKPNTIALSPDGK-YLYVSCRGPNHPTEGYLKKGLVLG 381 (433)
T ss_dssp EEEEEECSSTTEEEEEETTTTEEEEEETTT-TEEEEEEE-CSSSEEEEEECTTSS-EEEEEECCCCCTTTCTTSCCSSCC
T ss_pred cceEEECCCCCEEEEEecCCCEEEEEECCC-CcEEEEec-CCCCCCeEEEcCCCC-EEEEEecCCCccccccccccccce
Confidence 899999999988888889999999999997 56666665 678899999999997 4556555 57
Q ss_pred eEEEeeCCCCCcccCCCCcCCCCCeeeEEEcCCCCCcceEEeCCCCCcEEEEEeCCCcEEEEecCC
Q 014454 341 RLMVWDLSRIDEEQTPEDAEDGPPELLFIHGGHTSKISDFSWNPCEDWVISSVAEDNILQIWQMAE 406 (424)
Q Consensus 341 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~vw~~~~ 406 (424)
.|++||+.++ +.+..+.. ...+.+++|+|++++++++++.|+.|++|++..
T Consensus 382 ~v~~~d~~~~--------------~~~~~~~~-~~~~~~~~~s~dg~~l~~~~~~d~~i~v~~~~~ 432 (433)
T 3bws_A 382 KVYVIDTTTD--------------TVKEFWEA-GNQPTGLDVSPDNRYLVISDFLDHQIRVYRRDG 432 (433)
T ss_dssp EEEEEETTTT--------------EEEEEEEC-SSSEEEEEECTTSCEEEEEETTTTEEEEEEETT
T ss_pred EEEEEECCCC--------------cEEEEecC-CCCCceEEEcCCCCEEEEEECCCCeEEEEEecC
Confidence 9999999874 44445554 346899999999995444444699999999863
No 121
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.96 E-value=4.6e-27 Score=222.62 Aligned_cols=255 Identities=9% Similarity=0.053 Sum_probs=201.3
Q ss_pred CcEEEEEEeccCCceeEEEecCCCCcEEEEEeCCCeEEEEeCCCCCCCCCCCCCCCCcE-----EEecCCCceeEEEecC
Q 014454 114 GKVQIIQQINHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDL-----RLRGHSTEGYGLSWSK 188 (424)
Q Consensus 114 ~~~~~~~~~~h~~~v~~~~~~p~~~~~latg~~dg~v~iw~~~~~~~~~~~~~~~~~~~-----~~~~h~~~v~~l~~~~ 188 (424)
+.++....+.+...+.+++|+| +..++++++.++.|++||+.+ ..... .+.+|...|.+++|++
T Consensus 111 ~~~~~~~~~~~~~~~~~~~~s~-~~~~~~~~~~~~~i~~~d~~~----------g~~~~~~~~~~~~~~~~~v~~~~~~~ 179 (433)
T 3bws_A 111 ITHRFISRFKTGFQPKSVRFID-NTRLAIPLLEDEGMDVLDINS----------GQTVRLSPPEKYKKKLGFVETISIPE 179 (433)
T ss_dssp CSEEEEEEEECSSCBCCCEESS-SSEEEEEBTTSSSEEEEETTT----------CCEEEECCCHHHHTTCCEEEEEEEGG
T ss_pred CcceEEEEEcCCCCceEEEEeC-CCeEEEEeCCCCeEEEEECCC----------CeEeeecCcccccccCCceeEEEEcC
Confidence 4667777777778888999999 556888888899999999886 22222 3457889999999999
Q ss_pred CCCceEEEEeCCCcEEEEeCCCCCCCCcccceeeeecCCccEeeEEEecCCCcEEEEEeCCCeEEEEEcCCCCCCCCeee
Q 014454 189 FKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQS 268 (424)
Q Consensus 189 ~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~dg~i~i~d~~~~~~~~~~~~ 268 (424)
++. ++++++.|+.|++||++++. .+..+..|...+.+++|+|++..++++++.|+.|++||+++++. +..
T Consensus 180 ~~~-~~~s~~~d~~v~~~d~~~~~------~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~---~~~ 249 (433)
T 3bws_A 180 HNE-LWVSQMQANAVHVFDLKTLA------YKATVDLTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTKLE---IRK 249 (433)
T ss_dssp GTE-EEEEEGGGTEEEEEETTTCC------EEEEEECSSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTTEE---EEE
T ss_pred CCE-EEEEECCCCEEEEEECCCce------EEEEEcCCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCcE---EEE
Confidence 776 89999999999999997653 34556678889999999999988877877899999999987653 444
Q ss_pred eeccCCCeeEEEecCCCCeEEEEEe--------CCCcEEEEECCCCCCcceEecCCCCCEEEEEEcCCCCcEEEEEECCC
Q 014454 269 VVAHQSEVNCLAFNPFNEWILATGS--------TDKTVKLFDLRKISTALHTFDSHKEEVFQVGWNPKNETILASCCLGR 340 (424)
Q Consensus 269 ~~~~~~~v~~v~~~~~~~~~l~tg~--------~dg~i~iwd~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~l~s~~~dg 340 (424)
+.. ...+.+++|+|++.. +++++ .||.|++||+++ ++.+..+ .|...+.+++|+|+++.++++++.|+
T Consensus 250 ~~~-~~~~~~~~~~~~g~~-l~~~~~~~~~~~~~dg~i~~~d~~~-~~~~~~~-~~~~~~~~~~~~~~g~~l~~~~~~~~ 325 (433)
T 3bws_A 250 TDK-IGLPRGLLLSKDGKE-LYIAQFSASNQESGGGRLGIYSMDK-EKLIDTI-GPPGNKRHIVSGNTENKIYVSDMCCS 325 (433)
T ss_dssp CCC-CSEEEEEEECTTSSE-EEEEEEESCTTCSCCEEEEEEETTT-TEEEEEE-EEEECEEEEEECSSTTEEEEEETTTT
T ss_pred ecC-CCCceEEEEcCCCCE-EEEEECCCCccccCCCeEEEEECCC-CcEEeec-cCCCCcceEEECCCCCEEEEEecCCC
Confidence 433 456999999999985 55655 588999999997 4555444 45668999999999987788889999
Q ss_pred eEEEeeCCCCCcccCCCCcCCCCCeeeEEEcCCCCCcceEEeCCCCCcEEEEEeC---------------CCcEEEEecC
Q 014454 341 RLMVWDLSRIDEEQTPEDAEDGPPELLFIHGGHTSKISDFSWNPCEDWVISSVAE---------------DNILQIWQMA 405 (424)
Q Consensus 341 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~---------------dg~i~vw~~~ 405 (424)
.|++||+..+ ..+..+. +...+.+++|+|++++ +++++. ||.|++||+.
T Consensus 326 ~v~v~d~~~~--------------~~~~~~~-~~~~~~~~~~s~dg~~-l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~ 389 (433)
T 3bws_A 326 KIEVYDLKEK--------------KVQKSIP-VFDKPNTIALSPDGKY-LYVSCRGPNHPTEGYLKKGLVLGKVYVIDTT 389 (433)
T ss_dssp EEEEEETTTT--------------EEEEEEE-CSSSEEEEEECTTSSE-EEEEECCCCCTTTCTTSCCSSCCEEEEEETT
T ss_pred EEEEEECCCC--------------cEEEEec-CCCCCCeEEEcCCCCE-EEEEecCCCccccccccccccceEEEEEECC
Confidence 9999999864 3344443 5667899999999995 555554 5799999998
Q ss_pred CccC
Q 014454 406 ENIY 409 (424)
Q Consensus 406 ~~~~ 409 (424)
++..
T Consensus 390 ~~~~ 393 (433)
T 3bws_A 390 TDTV 393 (433)
T ss_dssp TTEE
T ss_pred CCcE
Confidence 7643
No 122
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.96 E-value=1.8e-27 Score=224.24 Aligned_cols=244 Identities=14% Similarity=0.092 Sum_probs=179.9
Q ss_pred eccCCceeEEEecCCCCcEEEEEeCCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCC-----ceeEEEecCCCCceEEE
Q 014454 122 INHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHST-----EGYGLSWSKFKEGHLLS 196 (424)
Q Consensus 122 ~~h~~~v~~~~~~p~~~~~latg~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~h~~-----~v~~l~~~~~~~~~l~s 196 (424)
+.|...|.+++|+|+|. .||+++.||.|+||+... ....+. |.. .+.+++|||+|. +|++
T Consensus 82 ~~~~~~V~~vawSPdG~-~LAs~s~dg~V~iwd~~~------------~l~~l~-~~~~~~~~sv~svafSPDG~-~LAs 146 (588)
T 2j04_A 82 SQPVCYPRVCKPSPIDD-WMAVLSNNGNVSVFKDNK------------MLTNLD-SKGNLSSRTYHCFEWNPIES-SIVV 146 (588)
T ss_dssp TSCSCCEEEEEECSSSS-CEEEEETTSCEEEEETTE------------EEEECC-CSSCSTTTCEEEEEECSSSS-CEEE
T ss_pred cCCCCcEEEEEECCCCC-EEEEEeCCCcEEEEeCCc------------eeeecc-CCCccccccEEEEEEcCCCC-EEEE
Confidence 36688999999999997 799999999999999543 233344 554 599999999998 7999
Q ss_pred EeCCCcEEEEeCCCCCCCC-cccceeee----ecCCccEeeEEEecCCCcEEEEEeCCCeEEEEEcCCCCCCCCeeee-e
Q 014454 197 GSDDAQICLWDINAAPKNK-SLEAMQIF----KVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSV-V 270 (424)
Q Consensus 197 ~~~dg~i~iwd~~~~~~~~-~~~~~~~~----~~~~~~v~~~~~~~~~~~~~~s~~~dg~i~i~d~~~~~~~~~~~~~-~ 270 (424)
|+.||+|++||+.++.... .+-.+..+ .+|...|.+++|+|++ +++++.|++|++||+..+........+ .
T Consensus 147 gs~DGtVkIWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg---Laass~D~tVrlWd~~~~~~~~~~~tL~~ 223 (588)
T 2j04_A 147 GNEDGELQFFSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV---LVAALSNNSVFSMTVSASSHQPVSRMIQN 223 (588)
T ss_dssp EETTSEEEEEECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE---EEEEETTCCEEEECCCSSSSCCCEEEEEC
T ss_pred EcCCCEEEEEECCCCccccccceeeeeeecccccccccEEEEEEcCCc---EEEEeCCCeEEEEECCCCccccceeeecc
Confidence 9999999999998763211 10123444 5678899999999998 568889999999999887642234455 4
Q ss_pred ccCCCeeEEEecCCCCeEEEEEeCCCcEEEEECCCCCCcceEecCCCCCEEEEEE--cCCCCcEEEEEECCCeEEEeeCC
Q 014454 271 AHQSEVNCLAFNPFNEWILATGSTDKTVKLFDLRKISTALHTFDSHKEEVFQVGW--NPKNETILASCCLGRRLMVWDLS 348 (424)
Q Consensus 271 ~~~~~v~~v~~~~~~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~~h~~~v~~~~~--sp~~~~~l~s~~~dg~i~iwd~~ 348 (424)
+|...|.+++|+ +. .||+++ +++|++||+.. +.......+|...|..++| +|++ ..|++++.||+ ++|...
T Consensus 224 ~h~~~V~svaFs--g~-~LASa~-~~tIkLWd~~~-~~~~~~~~gh~~~V~~va~~~s~d~-~~La~a~edG~-klw~~d 296 (588)
T 2j04_A 224 ASRRKITDLKIV--DY-KVVLTC-PGYVHKIDLKN-YSISSLKTGSLENFHIIPLNHEKES-TILLMSNKTSY-KVLLED 296 (588)
T ss_dssp CCSSCCCCEEEE--TT-EEEEEC-SSEEEEEETTT-TEEEEEECSCCSCCCEEEETTCSSC-EEEEECSSCEE-EEEESS
T ss_pred cccCcEEEEEEE--CC-EEEEEe-CCeEEEEECCC-CeEEEEEcCCCceEEEEEeeeCCCC-CEEEEEcCCCC-EEEeec
Confidence 788999999999 55 688887 69999999997 4442333379999999999 9998 47999999999 999985
Q ss_pred CCCcccCCCCc-----C------CCCCeeeEEEcCCCCCcceEEeCCCCCcEEEEEe
Q 014454 349 RIDEEQTPEDA-----E------DGPPELLFIHGGHTSKISDFSWNPCEDWVISSVA 394 (424)
Q Consensus 349 ~~~~~~~~~~~-----~------~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~ 394 (424)
.... ..... + +.....+..+.+ ...|++++|+|+|+ ++|+++
T Consensus 297 ~~~~--spd~~l~a~~d~~v~lW~~~g~~l~~~~~-~~~I~~va~SPdG~-~lA~~~ 349 (588)
T 2j04_A 297 ELHV--TADNIIAPYLEKKFKKWSTIWNEFNNYET-TLVIHGISLSPDGY-SIAIVY 349 (588)
T ss_dssp SEEE--ECCCSSHHHHHHHHHHTTTTTTSSSSSCC-EEEEEEEEECTTSS-EEEEEE
T ss_pred cEEE--CCCceEEEEcCCEEEEEECCCCceeeecc-ceEEEEEEECCCCC-EEEEEE
Confidence 3210 00000 0 000011112222 44589999999999 688776
No 123
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.96 E-value=9e-28 Score=224.57 Aligned_cols=280 Identities=15% Similarity=0.140 Sum_probs=177.7
Q ss_pred ccCCceeEEEec---CCCCcEEEEEeCCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCceeEEEecC-----------
Q 014454 123 NHDGEVNRARYM---PQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSK----------- 188 (424)
Q Consensus 123 ~h~~~v~~~~~~---p~~~~~latg~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~----------- 188 (424)
.-+....+++|+ |+...++++|. ++.|.+|+............... ......+...+..+.|++
T Consensus 13 pl~~~p~~~~w~~~~~~~~~l~a~g~-~~~i~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (393)
T 4gq1_A 13 PLNVRPYTTTWCSQSPSCSNLLAIGH-DTGITIYCASEEQTPGSTGLTLQ-ELFTIQTGLPTLHLSFSSSCSYSENLHDG 90 (393)
T ss_dssp CTTCCEEEEEECTTSGGGTTEEEEEE-SSEEEEEEEEECCSSSCCSEEEE-EEEEEECSSCEEEEEECTTCEEECC----
T ss_pred cCCCCCeEEEEeCCCCCCCCEEEEEC-CCCEEEEECCCCCccccccccee-eeEEEecCCCeeeEeecCCccccccccCC
Confidence 334455666674 45556777665 77899998754221110000000 011122344444444442
Q ss_pred --------CCCceEEEEeCCCcEEEEeCCCCCCCCcccceeeeecCCccEeeEEEecC-------CCcEEEEEeCCCeEE
Q 014454 189 --------FKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLR-------HEYLFGSVGDDQYLL 253 (424)
Q Consensus 189 --------~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-------~~~~~~s~~~dg~i~ 253 (424)
....+|++|+.|++|++||++.+... ....+..+.+|.+.|++++|+|. ..++||+++.|++|+
T Consensus 91 ~~~~~~~~~~~~~las~~~d~~v~lw~~~~~~~~-~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~ 169 (393)
T 4gq1_A 91 DGNVNSSPVYSLFLACVCQDNTVRLIITKNETII-TQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDCTLI 169 (393)
T ss_dssp ------CCEEEEEEEEEETTSCEEEEEEETTEEE-EEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTSEEE
T ss_pred CcceeecCCCCCEEEEEeCCCcEEEEECCCCccc-eeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEECCCeEE
Confidence 22337999999999999999876321 11234457789999999999982 235889999999999
Q ss_pred EEEcCCCCCCCCeeeeeccCCCeeEEEecCCCCeEEEEEeCCCcEEEEECCCCCCcc-----------------------
Q 014454 254 IWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATGSTDKTVKLFDLRKISTAL----------------------- 310 (424)
Q Consensus 254 i~d~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~l~tg~~dg~i~iwd~~~~~~~~----------------------- 310 (424)
|||++++.. +..+..|..++.+++|+|++..+|++|+.||+|++||+++.....
T Consensus 170 ~Wd~~~~~~---~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~ 246 (393)
T 4gq1_A 170 IWRLTDEGP---ILAGYPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPLVN 246 (393)
T ss_dssp EEEEETTEE---EEEEEECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC----------CSCCCSEEEESGGGC-
T ss_pred EEECCCCce---eeeecCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCCcccceEEeccccccee
Confidence 999987653 666778899999999999987789999999999999998732211
Q ss_pred -eEecCCCCCEEEEEEc-CCCCcEEEEEECCCeEEEeeCCCCCcccCCCCcCC-----CCCeeeEEEcCCCCCcceEEeC
Q 014454 311 -HTFDSHKEEVFQVGWN-PKNETILASCCLGRRLMVWDLSRIDEEQTPEDAED-----GPPELLFIHGGHTSKISDFSWN 383 (424)
Q Consensus 311 -~~~~~h~~~v~~~~~s-p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~-----~~~~~~~~~~~h~~~v~~~~~~ 383 (424)
....+|...|.++.|+ |++. .|++++.|+.+++||+.............. ...........+...+..+.+.
T Consensus 247 ~~~~~~~~~~v~~v~~~~~dg~-~l~s~s~d~~i~vwd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (393)
T 4gq1_A 247 TCHSSGIASSLANVRWIGSDGS-GILAMCKSGAWLRWNLFANNDYNEISDSTMKLGPKNLLPNVQGISLFPSLLGACPHP 325 (393)
T ss_dssp -----CCSSSCSEEEEETTTTC-EEEEECTTSEEEEEEC-------------------CCSCSEEEECSSCCSSCCEECS
T ss_pred eeecccccccceeeeeecCCCC-EEEEEeCCCCEEEEECccCCCCceEeeecCccccEEEccccccccccCcceeEEEcc
Confidence 1123577889999997 6775 799999999999999987654332211100 0001122233333333333344
Q ss_pred CCCCcEEEEEeCCCcEEEEecCCccC
Q 014454 384 PCEDWVISSVAEDNILQIWQMAENIY 409 (424)
Q Consensus 384 ~~~~~~l~s~~~dg~i~vw~~~~~~~ 409 (424)
+.+..++++|+.||.|++||+.++..
T Consensus 326 ~~~~~~~~sgs~Dg~V~lwd~~~~~~ 351 (393)
T 4gq1_A 326 RYMDYFATAHSQHGLIQLINTYEKDS 351 (393)
T ss_dssp SCTTEEEEEETTTTEEEEEETTCTTC
T ss_pred CCCCEEEEEECCCCEEEEEECCCCcE
Confidence 44554678888999999999987754
No 124
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=99.96 E-value=1.9e-26 Score=213.02 Aligned_cols=254 Identities=19% Similarity=0.186 Sum_probs=187.5
Q ss_pred CccEEEEccCCCCCCCCCCceEEEEEeecCCCCCCCeEEEEEEECCCCCCCcccCCCCCcCCCCCCCCCCCCcEEEEEEe
Q 014454 43 PSLTVEWLPDREEPPGKDYSVQKMILGTHTSENEPNYLMLAQVQLPLDDSENDARHYDDDRSDFGGFGCANGKVQIIQQI 122 (424)
Q Consensus 43 p~~~~~~~p~~~~~~~~~~~~~~~~~gt~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 122 (424)
+..+++|.|+... ...++.|+ .+..|+++.+.-. +........
T Consensus 41 ~v~~~~~~~~~~~-------g~~l~~~~-----~dg~i~iw~~~~~-------------------------~~~~~~~~~ 83 (368)
T 3mmy_A 41 SIGCLSFSPPTLP-------GNFLIAGS-----WANDVRCWEVQDS-------------------------GQTIPKAQQ 83 (368)
T ss_dssp CEEEEEECCTTSS-------SEEEEEEE-----TTSEEEEEEECTT-------------------------SCEEEEEEE
T ss_pred ceEEEEEcCCCCC-------ceEEEEEC-----CCCcEEEEEcCCC-------------------------CceeEEEec
Confidence 4678888887411 15566665 4467888877311 122223455
Q ss_pred ccCCceeEEEecCCCCcEEEEEeCCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCceeEEEe--cCCCCceEEEEeCC
Q 014454 123 NHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSW--SKFKEGHLLSGSDD 200 (424)
Q Consensus 123 ~h~~~v~~~~~~p~~~~~latg~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~--~~~~~~~l~s~~~d 200 (424)
.|.+.|++++|+|++. +|++|+.||.|++||+.. .. ...+.+|...|.+++| +|++. +|++++.|
T Consensus 84 ~h~~~v~~~~~~~~~~-~l~s~~~dg~v~iwd~~~----------~~-~~~~~~~~~~v~~~~~~~~~~~~-~l~~~~~d 150 (368)
T 3mmy_A 84 MHTGPVLDVCWSDDGS-KVFTASCDKTAKMWDLSS----------NQ-AIQIAQHDAPVKTIHWIKAPNYS-CVMTGSWD 150 (368)
T ss_dssp ECSSCEEEEEECTTSS-EEEEEETTSEEEEEETTT----------TE-EEEEEECSSCEEEEEEEECSSCE-EEEEEETT
T ss_pred cccCCEEEEEECcCCC-EEEEEcCCCcEEEEEcCC----------CC-ceeeccccCceEEEEEEeCCCCC-EEEEccCC
Confidence 7999999999999886 899999999999999987 22 3456779999999999 78776 79999999
Q ss_pred CcEEEEeCCCCCCCCcccce-----------------------------------eeeecCCccEeeEEEecCCC---cE
Q 014454 201 AQICLWDINAAPKNKSLEAM-----------------------------------QIFKVHEGVVEDVAWHLRHE---YL 242 (424)
Q Consensus 201 g~i~iwd~~~~~~~~~~~~~-----------------------------------~~~~~~~~~v~~~~~~~~~~---~~ 242 (424)
|.|++||++++.....+... .....+...+.++++.+... ..
T Consensus 151 g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (368)
T 3mmy_A 151 KTLKFWDTRSSNPMMVLQLPERCYCADVIYPMAVVATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTG 230 (368)
T ss_dssp SEEEEECSSCSSCSEEEECSSCEEEEEEETTEEEEEEGGGCEEEEECSSSCEEEEECCCSCSSCEEEEEEEECTTSCEEE
T ss_pred CcEEEEECCCCcEEEEEecCCCceEEEecCCeeEEEeCCCcEEEEEeccccchhhhccccccCCCceEEEcccCCCCCCe
Confidence 99999999877543222100 00001123344555544432 23
Q ss_pred EEEEeCCCeEEEEEcCCCCCCCCeeeeeccCC------------CeeEEEecCCCCeEEEEEeCCCcEEEEECCCCCCcc
Q 014454 243 FGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQS------------EVNCLAFNPFNEWILATGSTDKTVKLFDLRKISTAL 310 (424)
Q Consensus 243 ~~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~------------~v~~v~~~~~~~~~l~tg~~dg~i~iwd~~~~~~~~ 310 (424)
+++++.||.|++||++.......+..+..|.. .|++++|+|++. +|++|+.||.|++||+++ +.++
T Consensus 231 ~~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~-~l~s~~~dg~i~iwd~~~-~~~~ 308 (368)
T 3mmy_A 231 FALGSIEGRVAIHYINPPNPAKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVHG-TLATVGSDGRFSFWDKDA-RTKL 308 (368)
T ss_dssp EEEEETTSEEEEEESSCSCHHHHSEEEECSEEC----CCCEEECCEEEEEECTTTC-CEEEEETTSCEEEEETTT-TEEE
T ss_pred EEEecCCCcEEEEecCCCCccccceeeeeeecccccccccccccceEEEEEecCCC-EEEEEccCCeEEEEECCC-CcEE
Confidence 67999999999999988642234555666655 799999999998 589999999999999998 7888
Q ss_pred eEecCCCCCEEEEEEcCCCCcEEEEEECCCeEEEeeCCC
Q 014454 311 HTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSR 349 (424)
Q Consensus 311 ~~~~~h~~~v~~~~~sp~~~~~l~s~~~dg~i~iwd~~~ 349 (424)
..+..|...|.+++|+|++. +|++++.|+..+.|++..
T Consensus 309 ~~~~~~~~~v~~~~~s~~g~-~l~~~s~d~~~~~~~~~~ 346 (368)
T 3mmy_A 309 KTSEQLDQPISACCFNHNGN-IFAYASSYDWSKGHEFYN 346 (368)
T ss_dssp EECCCCSSCEEEEEECTTSS-CEEEEECCCSTTCGGGCC
T ss_pred EEecCCCCCceEEEECCCCC-eEEEEecccccccccccC
Confidence 99999999999999999996 688999888666665543
No 125
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.95 E-value=3.6e-26 Score=213.45 Aligned_cols=231 Identities=13% Similarity=0.091 Sum_probs=182.7
Q ss_pred cEEEEEeCCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCceeEEEecCCCCceEEEEeCCCcEEEEeCCCCCCCCccc
Q 014454 139 FLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLE 218 (424)
Q Consensus 139 ~~latg~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~ 218 (424)
.++++++.++.|++||+.+ .+....+..|. .+.+++|+|++..++++++.|+.|++||+.+++
T Consensus 3 ~l~vs~~~d~~v~v~d~~~----------~~~~~~~~~~~-~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~------ 65 (391)
T 1l0q_A 3 FAYIANSESDNISVIDVTS----------NKVTATIPVGS-NPMGAVISPDGTKVYVANAHSNDVSIIDTATNN------ 65 (391)
T ss_dssp EEEEEETTTTEEEEEETTT----------TEEEEEEECSS-SEEEEEECTTSSEEEEEEGGGTEEEEEETTTTE------
T ss_pred EEEEEcCCCCEEEEEECCC----------CeEEEEeecCC-CcceEEECCCCCEEEEECCCCCeEEEEECCCCe------
Confidence 5789999999999999987 34455666554 589999999998545788899999999997763
Q ss_pred ceeeeecCCccEeeEEEecCCCcEEEEEeCCCeEEEEEcCCCCCCCCeeeeeccCCCeeEEEecCCCCeEEEEEeCCCcE
Q 014454 219 AMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATGSTDKTV 298 (424)
Q Consensus 219 ~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~l~tg~~dg~i 298 (424)
.+..+..+ ..+.+++|+|+++.++++++.++.|++||+.+++. +..+. +...+.+++|+|+++.++++++.++.|
T Consensus 66 ~~~~~~~~-~~v~~~~~spdg~~l~~~~~~~~~v~v~d~~~~~~---~~~~~-~~~~~~~~~~s~dg~~l~~~~~~~~~v 140 (391)
T 1l0q_A 66 VIATVPAG-SSPQGVAVSPDGKQVYVTNMASSTLSVIDTTSNTV---AGTVK-TGKSPLGLALSPDGKKLYVTNNGDKTV 140 (391)
T ss_dssp EEEEEECS-SSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEE---EEEEE-CSSSEEEEEECTTSSEEEEEETTTTEE
T ss_pred EEEEEECC-CCccceEECCCCCEEEEEECCCCEEEEEECCCCeE---EEEEe-CCCCcceEEECCCCCEEEEEeCCCCEE
Confidence 33444433 48999999999998877887889999999998653 44444 445789999999999766889899999
Q ss_pred EEEECCCCCCcceEecCCCCCEEEEEEcCCCCcEEEEEECCCeEEEeeCCCCCcccCCCCcCCCCCeeeEEEcCCCCCcc
Q 014454 299 KLFDLRKISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPEDAEDGPPELLFIHGGHTSKIS 378 (424)
Q Consensus 299 ~iwd~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~ 378 (424)
++||+++ ++.+..+..+ ..+.+++|+|+++.++++++.++.|++||++.. ....... +...+.
T Consensus 141 ~~~d~~~-~~~~~~~~~~-~~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~~--------------~~~~~~~-~~~~~~ 203 (391)
T 1l0q_A 141 SVINTVT-KAVINTVSVG-RSPKGIAVTPDGTKVYVANFDSMSISVIDTVTN--------------SVIDTVK-VEAAPS 203 (391)
T ss_dssp EEEETTT-TEEEEEEECC-SSEEEEEECTTSSEEEEEETTTTEEEEEETTTT--------------EEEEEEE-CSSEEE
T ss_pred EEEECCC-CcEEEEEecC-CCcceEEECCCCCEEEEEeCCCCEEEEEECCCC--------------eEEEEEe-cCCCcc
Confidence 9999997 6677777664 567999999999866678888999999999874 3333333 345689
Q ss_pred eEEeCCCCCcEEEEEe--CCCcEEEEecCCcc
Q 014454 379 DFSWNPCEDWVISSVA--EDNILQIWQMAENI 408 (424)
Q Consensus 379 ~~~~~~~~~~~l~s~~--~dg~i~vw~~~~~~ 408 (424)
+++|+|+++++++++. .++.|++||+.++.
T Consensus 204 ~~~~~~~g~~l~~~~~~~~~~~v~~~d~~~~~ 235 (391)
T 1l0q_A 204 GIAVNPEGTKAYVTNVDKYFNTVSMIDTGTNK 235 (391)
T ss_dssp EEEECTTSSEEEEEEECSSCCEEEEEETTTTE
T ss_pred ceEECCCCCEEEEEecCcCCCcEEEEECCCCe
Confidence 9999999995444443 78999999998763
No 126
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.95 E-value=7.5e-27 Score=207.01 Aligned_cols=199 Identities=12% Similarity=0.135 Sum_probs=144.7
Q ss_pred cCCceeEEEecCC----CCcEEEEEe--------------------CCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCC
Q 014454 124 HDGEVNRARYMPQ----NPFLIATKT--------------------VSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHST 179 (424)
Q Consensus 124 h~~~v~~~~~~p~----~~~~latg~--------------------~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~h~~ 179 (424)
|.+.|++++|+|+ ++ .+++++ .|+.|++|++.. ..+....+.+|..
T Consensus 110 ~~~~v~sla~spd~~~~~~-~l~s~g~~~~v~~l~~g~lv~ss~~g~d~~V~~~~~s~---------dG~~~~s~~~~~~ 179 (356)
T 2w18_A 110 EIREIRALFCSSDDESEKQ-VLLKSGNIKAVLGLTKRRLVSSSGTLSDQQVEVMTFAE---------DGGGKENQFLMPP 179 (356)
T ss_dssp SEEEEEEECC------CCE-EEEEEEEEEEEEEETTTEEEEEESSSTTCEEEEEEECT---------TSCEEEEEEECCC
T ss_pred cccceEEEEECCCcccccc-EEEeCCCeEEEEecCCCcEEEecccCCCCcEEEEEECC---------CCceeeeeccCCC
Confidence 3457777777776 54 444433 388888888854 1344567778999
Q ss_pred ceeEEEecC---CCCceEEEEeCCCcEEEEeCCCCCCCCcccceeeeecCC---ccEeeEEEecCCCcE-----------
Q 014454 180 EGYGLSWSK---FKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHE---GVVEDVAWHLRHEYL----------- 242 (424)
Q Consensus 180 ~v~~l~~~~---~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~---~~v~~~~~~~~~~~~----------- 242 (424)
.+..++|++ ++. +|++|+.|++|+|||+++++ .+..+.+|. ..+.+++|+|++..+
T Consensus 180 ~v~~l~fs~~~g~~~-~LaSgS~D~TIkIWDl~TGk------~l~tL~g~~~~v~~v~~vafSpdG~~lvs~s~~~~~w~ 252 (356)
T 2w18_A 180 EETILTFAEVQGMQE-ALLGTTIMNNIVIWNLKTGQ------LLKKMHIDDSYQASVCHKAYSEMGLLFIVLSHPCAKES 252 (356)
T ss_dssp SSCEEEEEEEETSTT-EEEEEETTSEEEEEETTTCC------EEEEEECCC---CCCEEEEEEETTEEEEEEC-------
T ss_pred ceeeEEeeccCCCCc-eEEEecCCCcEEEEECCCCc------EEEEEcCCCcceeeeEEEEECCCCCEEEEeccCCCcce
Confidence 999999998 455 79999999999999998874 345555543 357777999998654
Q ss_pred EEEEeCCCeEEEEEcCCCCCCCCeeee-----eccCCCeeEEEecCCCCeEEEEEeCCCcEEEEECCCCCCcceEecCCC
Q 014454 243 FGSVGDDQYLLIWDLRTPSVSKPVQSV-----VAHQSEVNCLAFNPFNEWILATGSTDKTVKLFDLRKISTALHTFDSHK 317 (424)
Q Consensus 243 ~~s~~~dg~i~i~d~~~~~~~~~~~~~-----~~~~~~v~~v~~~~~~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~~h~ 317 (424)
+++|+.|++|++||..+++. +..+ .+|...+.+..++ +. ++|+|+.|++|+|||+++ ++.+.++.+|.
T Consensus 253 laSGs~D~tIklWd~~tgk~---l~v~~~~~p~Gh~~~~lsg~~s--g~-~lASgS~DgTIkIWDl~t-Gk~l~tL~gH~ 325 (356)
T 2w18_A 253 ESLRSPVFQLIVINPKTTLS---VGVMLYCLPPGQAGRFLEGDVK--DH-CAAAILTSGTIAIWDLLL-GQCTALLPPVS 325 (356)
T ss_dssp -----CCEEEEEEETTTTEE---EEEEEECCCTTCCCCEEEEEEE--TT-EEEEEETTSCEEEEETTT-CSEEEEECCC-
T ss_pred eeccCCCcEEEEEECCCCEE---EEEEEeeccCCCcceeEccccC--CC-EEEEEcCCCcEEEEECCC-CcEEEEecCCC
Confidence 36788999999999988653 3222 2455555544544 54 799999999999999998 78999999988
Q ss_pred CCEE-EEEEcCCCCcEEEEEECCCeEEEeeC
Q 014454 318 EEVF-QVGWNPKNETILASCCLGRRLMVWDL 347 (424)
Q Consensus 318 ~~v~-~~~~sp~~~~~l~s~~~dg~i~iwd~ 347 (424)
..+. +++|+|+++ +|++|+.|++|+|||+
T Consensus 326 ~~vvs~vafSPDG~-~LaSGS~D~TIklWd~ 355 (356)
T 2w18_A 326 DQHWSFVKWSGTDS-HLLAGQKDGNIFVYHY 355 (356)
T ss_dssp -CCCCEEEECSSSS-EEEEECTTSCEEEEEE
T ss_pred CCeEEEEEECCCCC-EEEEEECCCcEEEecC
Confidence 7665 589999996 7999999999999985
No 127
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.95 E-value=1.3e-24 Score=199.54 Aligned_cols=297 Identities=8% Similarity=0.061 Sum_probs=206.9
Q ss_pred eEEEEEeecCCCCCCCeEEEEEEECCCCCCCcccCCCCCcCCCCCCCCCCCCcEEEEEEeccCCceeEEEecCCCCcEEE
Q 014454 63 VQKMILGTHTSENEPNYLMLAQVQLPLDDSENDARHYDDDRSDFGGFGCANGKVQIIQQINHDGEVNRARYMPQNPFLIA 142 (424)
Q Consensus 63 ~~~~~~gt~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~la 142 (424)
.+++++|+++.+ ....++++.++.. .+++..+....+...+..++|+|+++ +++
T Consensus 2 ~~~~~vg~y~~~-~~~~i~v~~~d~~------------------------tg~~~~~~~~~~~~~p~~~a~spdg~-l~~ 55 (347)
T 3hfq_A 2 QERILFGTYTKK-TSQGIYQGTLDTT------------------------AKTLTNDGLLAATQNPTYLALSAKDC-LYS 55 (347)
T ss_dssp EEEEEEEECCSS-SCCEEEEEEEETT------------------------TTEEEEEEEEEECSCCCCEEECTTCE-EEE
T ss_pred CcEEEEEeccCC-CCCCEEEEEEcCC------------------------CCeEEEeeeeeccCCcceEEEccCCe-EEE
Confidence 478899998865 3557888888522 34566666677788899999999987 666
Q ss_pred EEeC--CCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCceeEEEecCCCCceEEEEe-CCCcEEEEeCCCCCCCCcccc
Q 014454 143 TKTV--SAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGS-DDAQICLWDINAAPKNKSLEA 219 (424)
Q Consensus 143 tg~~--dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~-~dg~i~iwd~~~~~~~~~~~~ 219 (424)
++.. ++.|++|++.. +.......+..+...+..++|+|++. +|++++ .++.|.+|++..... ...
T Consensus 56 ~~~~~~~~~v~~~~~~~--------g~~~~~~~~~~~~~~p~~~a~spdg~-~l~~~~~~~~~v~v~~~~~~g~---~~~ 123 (347)
T 3hfq_A 56 VDKEDDEGGIAAWQIDG--------QTAHKLNTVVAPGTPPAYVAVDEARQ-LVYSANYHKGTAEVMKIAADGA---LTL 123 (347)
T ss_dssp EEEETTEEEEEEEEEET--------TEEEEEEEEEEESCCCSEEEEETTTT-EEEEEETTTTEEEEEEECTTSC---EEE
T ss_pred EEecCCCceEEEEEecC--------CcEEEeeeeecCCCCCEEEEECCCCC-EEEEEeCCCCEEEEEEeCCCCC---eee
Confidence 6543 68999999965 22333444556778889999999998 566666 789999999964322 122
Q ss_pred eeeeec---------CCccEeeEEEecCCCcEEEEEeCCCeEEEEEcCCCCCCCCeeeeec-cCCCeeEEEecCCCCeEE
Q 014454 220 MQIFKV---------HEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVA-HQSEVNCLAFNPFNEWIL 289 (424)
Q Consensus 220 ~~~~~~---------~~~~v~~~~~~~~~~~~~~s~~~dg~i~i~d~~~~~~~~~~~~~~~-~~~~v~~v~~~~~~~~~l 289 (424)
+..+.. +...+.+++|+|+++ ++++...++.|.+||+........+..+.. ....+..++|+|+|++++
T Consensus 124 ~~~~~~~~~~p~~~~~~~~~~~~~~spdg~-l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~p~~~~~spdg~~l~ 202 (347)
T 3hfq_A 124 TDTVQHSGHGPRPEQDGSHIHYTDLTPDNR-LAVIDLGSDKVYVYNVSDAGQLSEQSVLTMEAGFGPRHLVFSPDGQYAF 202 (347)
T ss_dssp EEEEECCCCCSSTTCSSCCEEEEEECTTSC-EEEEETTTTEEEEEEECTTSCEEEEEEEECCTTCCEEEEEECTTSSEEE
T ss_pred cceeecCCCCCCccccCCCceEEEECCCCc-EEEEeCCCCEEEEEEECCCCcEEEeeeEEcCCCCCCceEEECCCCCEEE
Confidence 222211 123488999999998 887888899999999983222112222222 234678899999999777
Q ss_pred EEEeCCCcEEEEECCCC-CC--cceEecCCC------CCEEEEEEcCCCCcEEEEEECCCeEEEeeCCCCCcccCCCCcC
Q 014454 290 ATGSTDKTVKLFDLRKI-ST--ALHTFDSHK------EEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPEDAE 360 (424)
Q Consensus 290 ~tg~~dg~i~iwd~~~~-~~--~~~~~~~h~------~~v~~~~~sp~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~ 360 (424)
+++..++.|.+|++... +. .+..+.... ..+..++|+|+++.+++++..++.|.+|++....
T Consensus 203 v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~l~v~~~~~~~v~v~~~~~~g--------- 273 (347)
T 3hfq_A 203 LAGELSSQIASLKYDTQTGAFTQLGIVKTIPADYTAHNGAAAIRLSHDGHFLYVSNRGYNTLAVFAVTADG--------- 273 (347)
T ss_dssp EEETTTTEEEEEEEETTTTEEEEEEEEESSCTTCCSCCEEEEEEECTTSCEEEEEEETTTEEEEEEECGGG---------
T ss_pred EEeCCCCEEEEEEecCCCCceEEeeeeeecCCCCCCCCcceeEEECCCCCEEEEEeCCCCEEEEEEECCCC---------
Confidence 77778899999998741 22 122332222 4588999999998666777789999999987421
Q ss_pred CCCCeeeEEEcCCCCCcceEEeCCCCCcEEEEEeCCCcEEEEec--CCccC
Q 014454 361 DGPPELLFIHGGHTSKISDFSWNPCEDWVISSVAEDNILQIWQM--AENIY 409 (424)
Q Consensus 361 ~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~vw~~--~~~~~ 409 (424)
....+.....+...+..++|+|++++++++...++.|.+|++ .++.+
T Consensus 274 --~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~d~~tg~l 322 (347)
T 3hfq_A 274 --HLTLIQQISTEGDFPRDFDLDPTEAFVVVVNQNTDNATLYARDLTSGKL 322 (347)
T ss_dssp --CEEEEEEEECSSSCCCEEEECTTSSEEEEEETTTTEEEEEEECTTTCCE
T ss_pred --cEEEeEEEecCCCCcCeEEECCCCCEEEEEEcCCCcEEEEEEeCCCCeE
Confidence 114455555666678999999999965555556699999955 44543
No 128
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.93 E-value=7.1e-24 Score=193.90 Aligned_cols=268 Identities=9% Similarity=0.134 Sum_probs=181.1
Q ss_pred cEEEEEEeccCCceeEEEecCCCCcEEEEEeCC-CeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCceeEEEecCCCCce
Q 014454 115 KVQIIQQINHDGEVNRARYMPQNPFLIATKTVS-AEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGH 193 (424)
Q Consensus 115 ~~~~~~~~~h~~~v~~~~~~p~~~~~latg~~d-g~v~iw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~ 193 (424)
.++....+.|...+.+++|+|+++. |++++.+ +.|.+|++.... +.......+..+. .+.+++|+|++..+
T Consensus 27 ~~~~~~~~~~~~~~~~~~~spdg~~-l~~~~~~~~~v~~~~~~~~~------~~~~~~~~~~~~~-~~~~~~~s~dg~~l 98 (343)
T 1ri6_A 27 ALTLTQVVDVPGQVQPMVVSPDKRY-LYVGVRPEFRVLAYRIAPDD------GALTFAAESALPG-SLTHISTDHQGQFV 98 (343)
T ss_dssp CEEEEEEEECSSCCCCEEECTTSSE-EEEEETTTTEEEEEEECTTT------CCEEEEEEEECSS-CCSEEEECTTSSEE
T ss_pred cEEEeeeEecCCCCceEEECCCCCE-EEEeecCCCeEEEEEecCCC------CceeeccccccCC-CCcEEEEcCCCCEE
Confidence 4555667788999999999999974 5555554 999999997310 1222333444444 78999999999843
Q ss_pred EEEEeCCCcEEEEeCCCCCCCCcccceeeeecCCccEeeEEEecCCCcEEEEEeCCCeEEEEEcCCCCCCCCee--eeec
Q 014454 194 LLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQ--SVVA 271 (424)
Q Consensus 194 l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~dg~i~i~d~~~~~~~~~~~--~~~~ 271 (424)
++++..++.|.+||+..+ ........+. ....+.+++|+|++..+++++..++.|.+||+.+......+. ....
T Consensus 99 ~~~~~~~~~i~~~d~~~~---~~~~~~~~~~-~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~ 174 (343)
T 1ri6_A 99 FVGSYNAGNVSVTRLEDG---LPVGVVDVVE-GLDGCHSANISPDNRTLWVPALKQDRICLFTVSDDGHLVAQDPAEVTT 174 (343)
T ss_dssp EEEETTTTEEEEEEEETT---EEEEEEEEEC-CCTTBCCCEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEEEEC
T ss_pred EEEecCCCeEEEEECCCC---cccccccccc-CCCCceEEEECCCCCEEEEecCCCCEEEEEEecCCCceeeeccccccc
Confidence 344455899999999522 1112233333 334689999999998777655589999999998722211111 2222
Q ss_pred -cCCCeeEEEecCCCCeEEEEEeCCCcEEEEECCCC-CCc--ceEec---CC---CCCEEEEEEcCCCCcEEEEEECCCe
Q 014454 272 -HQSEVNCLAFNPFNEWILATGSTDKTVKLFDLRKI-STA--LHTFD---SH---KEEVFQVGWNPKNETILASCCLGRR 341 (424)
Q Consensus 272 -~~~~v~~v~~~~~~~~~l~tg~~dg~i~iwd~~~~-~~~--~~~~~---~h---~~~v~~~~~sp~~~~~l~s~~~dg~ 341 (424)
....+.+++|+|+++++++++..++.|.+||+... +.. ...+. .. ...+..++|+|+++.+++++..++.
T Consensus 175 ~~~~~~~~~~~~pdg~~l~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~l~v~~~~~~~ 254 (343)
T 1ri6_A 175 VEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLYACDRTASL 254 (343)
T ss_dssp STTCCEEEEEECTTSSEEEEEETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTTSSEEEEEETTTTE
T ss_pred CCCCCcceEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEeeccccCccccccCCccceEECCCCCEEEEEecCCCE
Confidence 34578899999999976677778999999999642 221 22222 11 2357789999999866667778999
Q ss_pred EEEeeCCCCCcccCCCCcCCCCCeeeEEEcCCCCCcceEEeCCCCCcEEEEEeCCCcEEEEecC
Q 014454 342 LMVWDLSRIDEEQTPEDAEDGPPELLFIHGGHTSKISDFSWNPCEDWVISSVAEDNILQIWQMA 405 (424)
Q Consensus 342 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~vw~~~ 405 (424)
|.+|++..... ....+.....+.. +..++|+|+++++++++..++.|.+|++.
T Consensus 255 i~v~d~~~~~~----------~~~~~~~~~~~~~-~~~~~~s~dg~~l~~~~~~~~~v~v~~~d 307 (343)
T 1ri6_A 255 ITVFSVSEDGS----------VLSKEGFQPTETQ-PRGFNVDHSGKYLIAAGQKSHHISVYEIV 307 (343)
T ss_dssp EEEEEECTTSC----------CEEEEEEEECSSS-CCCEEECTTSSEEEEECTTTCEEEEEEEE
T ss_pred EEEEEEcCCCC----------ceEEeeeecCCCc-cceEEECCCCCEEEEecCCCCeEEEEEEc
Confidence 99999973110 1133444444444 89999999999655555478999999554
No 129
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.93 E-value=1.5e-23 Score=197.10 Aligned_cols=245 Identities=11% Similarity=0.040 Sum_probs=182.3
Q ss_pred EEeccCCceeEEEecCC--------------CCcEEEEEeCC------CeEEEEeCCCCCCCCCCCCCCCCcEEEecCCC
Q 014454 120 QQINHDGEVNRARYMPQ--------------NPFLIATKTVS------AEVYVFDYSKHPSKPPLDGACSPDLRLRGHST 179 (424)
Q Consensus 120 ~~~~h~~~v~~~~~~p~--------------~~~~latg~~d------g~v~iw~~~~~~~~~~~~~~~~~~~~~~~h~~ 179 (424)
....|...+..+++.+. +. .++.++.+ +.|++||+.. .....+.+|..
T Consensus 112 ~~~~~~~~~~~~~~~~~d~~~~~~~g~~~~~~~-~l~~~s~~~~~~~~~~i~i~d~~g-----------~~~~~l~~~~~ 179 (415)
T 2hqs_A 112 SYKVNKQWLRYAGHTASDEVFEKLTGIKGAFRT-RIAYVVQTNGGQFPYELRVSDYDG-----------YNQFVVHRSPQ 179 (415)
T ss_dssp EEEECGGGHHHHHHHHHHHHHHHHHSSCCCTTC-EEEEEEECSSSSCCEEEEEEETTS-----------CSCEEEEEESS
T ss_pred EEEcChhHHHHHHHHHHHHHHHHHcCCCCcCCC-EEEEEEecCCCCccceEEEEcCCC-----------CCCEEEeCCCC
Confidence 34568888888877751 44 34444443 7999999875 33567888999
Q ss_pred ceeEEEecCCCCceEEEEeCCC---cEEEEeCCCCCCCCcccceeeeecCCccEeeEEEecCCCcEEEEEeCCCe--EEE
Q 014454 180 EGYGLSWSKFKEGHLLSGSDDA---QICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQY--LLI 254 (424)
Q Consensus 180 ~v~~l~~~~~~~~~l~s~~~dg---~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~dg~--i~i 254 (424)
.+.+++|+|++. .|++++.++ .|++||+.+++. ..+..|...+.+++|+|+++.++++++.++. |++
T Consensus 180 ~v~~~~~Spdg~-~la~~s~~~~~~~i~~~d~~tg~~-------~~l~~~~~~~~~~~~spdg~~la~~~~~~g~~~i~~ 251 (415)
T 2hqs_A 180 PLMSPAWSPDGS-KLAYVTFESGRSALVIQTLANGAV-------RQVASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYV 251 (415)
T ss_dssp CEEEEEECTTSS-EEEEEECTTSSCEEEEEETTTCCE-------EEEECCSSCEEEEEECTTSSEEEEEECTTSSCEEEE
T ss_pred cceeeEEcCCCC-EEEEEEecCCCcEEEEEECCCCcE-------EEeecCCCcccCEEEcCCCCEEEEEEecCCCceEEE
Confidence 999999999998 688888775 999999987632 2345677899999999999877767776655 999
Q ss_pred EEcCCCCCCCCeeeeeccCCCeeEEEecCCCCeEEEEEeC-CC--cEEEEECCCCCCcceEecCCCCCEEEEEEcCCCCc
Q 014454 255 WDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATGST-DK--TVKLFDLRKISTALHTFDSHKEEVFQVGWNPKNET 331 (424)
Q Consensus 255 ~d~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~l~tg~~-dg--~i~iwd~~~~~~~~~~~~~h~~~v~~~~~sp~~~~ 331 (424)
||++++. ...+..|...+.+++|+|+++. |++++. ++ .|.+||+.. +. ...+..+...+.+++|+|+++.
T Consensus 252 ~d~~~~~----~~~l~~~~~~~~~~~~spdg~~-l~~~s~~~g~~~i~~~d~~~-~~-~~~l~~~~~~~~~~~~spdG~~ 324 (415)
T 2hqs_A 252 MDLASGQ----IRQVTDGRSNNTEPTWFPDSQN-LAFTSDQAGRPQVYKVNING-GA-PQRITWEGSQNQDADVSSDGKF 324 (415)
T ss_dssp EETTTCC----EEECCCCSSCEEEEEECTTSSE-EEEEECTTSSCEEEEEETTS-SC-CEECCCSSSEEEEEEECTTSSE
T ss_pred EECCCCC----EEeCcCCCCcccceEECCCCCE-EEEEECCCCCcEEEEEECCC-CC-EEEEecCCCcccCeEECCCCCE
Confidence 9998755 3556678889999999999985 555554 55 677778876 33 4556667788999999999974
Q ss_pred EEEEEECC---CeEEEeeCCCCCcccCCCCcCCCCCeeeEEEcCCCCCcceEEeCCCCCcEEEEEeCCC---cEEEEecC
Q 014454 332 ILASCCLG---RRLMVWDLSRIDEEQTPEDAEDGPPELLFIHGGHTSKISDFSWNPCEDWVISSVAEDN---ILQIWQMA 405 (424)
Q Consensus 332 ~l~s~~~d---g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg---~i~vw~~~ 405 (424)
|++++.+ ..|.+||+..+. ...+..|. .+..++|+|+++. |++++.++ .|++|++.
T Consensus 325 -l~~~~~~~g~~~i~~~d~~~~~---------------~~~l~~~~-~~~~~~~spdg~~-l~~~s~~~~~~~l~~~d~~ 386 (415)
T 2hqs_A 325 -MVMVSSNGGQQHIAKQDLATGG---------------VQVLSSTF-LDETPSLAPNGTM-VIYSSSQGMGSVLNLVSTD 386 (415)
T ss_dssp -EEEEEECSSCEEEEEEETTTCC---------------EEECCCSS-SCEEEEECTTSSE-EEEEEEETTEEEEEEEETT
T ss_pred -EEEEECcCCceEEEEEECCCCC---------------EEEecCCC-CcCCeEEcCCCCE-EEEEEcCCCccEEEEEECC
Confidence 5555543 589999998743 12334444 7899999999995 55555555 79999998
Q ss_pred CccC
Q 014454 406 ENIY 409 (424)
Q Consensus 406 ~~~~ 409 (424)
.+..
T Consensus 387 g~~~ 390 (415)
T 2hqs_A 387 GRFK 390 (415)
T ss_dssp SCCE
T ss_pred CCcE
Confidence 6644
No 130
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.92 E-value=1e-22 Score=185.54 Aligned_cols=253 Identities=6% Similarity=0.027 Sum_probs=182.3
Q ss_pred cCCceeEEEecCCCCcEEEEEeCCCeEEEEeCCCCCCCCCCCCCCCC-cEEEecCCCceeEEEecCCCCceEEEEeCCC-
Q 014454 124 HDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSP-DLRLRGHSTEGYGLSWSKFKEGHLLSGSDDA- 201 (424)
Q Consensus 124 h~~~v~~~~~~p~~~~~latg~~dg~v~iw~~~~~~~~~~~~~~~~~-~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg- 201 (424)
+...+ .++|+|+++.+++++..++.|++||..+ ... ...+..+..+..+++|+|++. +|+++..++
T Consensus 39 ~~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~----------~~~~~~~~~~~~~~~~~~~~s~dg~-~l~~~~~~~~ 106 (331)
T 3u4y_A 39 GYDFV-DTAITSDCSNVVVTSDFCQTLVQIETQL----------EPPKVVAIQEGQSSMADVDITPDDQ-FAVTVTGLNH 106 (331)
T ss_dssp CCCEE-EEEECSSSCEEEEEESTTCEEEEEECSS----------SSCEEEEEEECSSCCCCEEECTTSS-EEEECCCSSS
T ss_pred cCCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCC----------CceeEEecccCCCCccceEECCCCC-EEEEecCCCC
Confidence 34556 9999999986677766689999999987 233 455666666665599999988 577555553
Q ss_pred --cEEEEeCCCCCCCCcccceeeeecCCccEeeEEEecCCCcEEEEEeCCCe-EEEEEcCCCCCCCCe-eeeeccCCCee
Q 014454 202 --QICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQY-LLIWDLRTPSVSKPV-QSVVAHQSEVN 277 (424)
Q Consensus 202 --~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~dg~-i~i~d~~~~~~~~~~-~~~~~~~~~v~ 277 (424)
.|.+||+.++. .+..+. ......+++|+|+++.++++...++. |.+|++......... .........+.
T Consensus 107 ~~~i~v~d~~~~~------~~~~~~-~~~~~~~~~~spdg~~l~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~ 179 (331)
T 3u4y_A 107 PFNMQSYSFLKNK------FISTIP-IPYDAVGIAISPNGNGLILIDRSSANTVRRFKIDADGVLFDTGQEFISGGTRPF 179 (331)
T ss_dssp SCEEEEEETTTTE------EEEEEE-CCTTEEEEEECTTSSCEEEEEETTTTEEEEEEECTTCCEEEEEEEEECSSSSEE
T ss_pred cccEEEEECCCCC------eEEEEE-CCCCccceEECCCCCEEEEEecCCCceEEEEEECCCCcEeecCCccccCCCCcc
Confidence 89999997663 233333 34456899999999888878788788 999999864421111 12223445689
Q ss_pred EEEecCCCCeEEEEEeCCCcEEEEECCCCCCc---ceEecCCCCCEEEEEEcCCCCcEEEEEECCCeEEEeeCCCCCccc
Q 014454 278 CLAFNPFNEWILATGSTDKTVKLFDLRKISTA---LHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQ 354 (424)
Q Consensus 278 ~v~~~~~~~~~l~tg~~dg~i~iwd~~~~~~~---~~~~~~h~~~v~~~~~sp~~~~~l~s~~~dg~i~iwd~~~~~~~~ 354 (424)
.++|+|+++++++++..++.|.+||+.+ ++. +..+.. ...+..++|+|+++.++++...++.|.+||+.++..
T Consensus 180 ~~~~spdg~~l~v~~~~~~~v~v~d~~~-~~~~~~~~~~~~-~~~~~~~~~spdg~~l~v~~~~~~~i~~~d~~~~~~-- 255 (331)
T 3u4y_A 180 NITFTPDGNFAFVANLIGNSIGILETQN-PENITLLNAVGT-NNLPGTIVVSRDGSTVYVLTESTVDVFNFNQLSGTL-- 255 (331)
T ss_dssp EEEECTTSSEEEEEETTTTEEEEEECSS-TTSCEEEEEEEC-SSCCCCEEECTTSSEEEEECSSEEEEEEEETTTTEE--
T ss_pred ceEECCCCCEEEEEeCCCCeEEEEECCC-CcccceeeeccC-CCCCceEEECCCCCEEEEEEcCCCEEEEEECCCCce--
Confidence 9999999997777777899999999987 555 666654 467789999999976566666688899999987532
Q ss_pred CCCCcCCCCCeeeEEEcCC----CC---CcceEEeCCCCCcEEEEEeCCCcEEEEecCCccC
Q 014454 355 TPEDAEDGPPELLFIHGGH----TS---KISDFSWNPCEDWVISSVAEDNILQIWQMAENIY 409 (424)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~h----~~---~v~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~ 409 (424)
..+..+..+ .. ....++|+|+++++++++..++.|.+|++....+
T Consensus 256 ----------~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~ 307 (331)
T 3u4y_A 256 ----------SFVKSFGHGLLIDPRPLFGANQMALNKTETKLFISANISRELKVFTISGKVV 307 (331)
T ss_dssp ----------EEEEEEECCCCCCCGGGTTCCCEEECTTSSEEEEEETTTTEEEEEETTSCEE
T ss_pred ----------eeecccccccccCCCCcccccceEECCCCCEEEEecCCCCcEEEEEecCCcc
Confidence 112221111 11 2355899999997667777788999999988754
No 131
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.92 E-value=7.9e-22 Score=182.06 Aligned_cols=299 Identities=13% Similarity=0.131 Sum_probs=197.0
Q ss_pred eEEEEEeecCCCCCCCeEEEEEEECCCCCCCcccCCCCCcCCCCCCCCCCCCcEEEEEEeccCCceeEEEecCCCCcEEE
Q 014454 63 VQKMILGTHTSENEPNYLMLAQVQLPLDDSENDARHYDDDRSDFGGFGCANGKVQIIQQINHDGEVNRARYMPQNPFLIA 142 (424)
Q Consensus 63 ~~~~~~gt~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~la 142 (424)
...+++|+++.+ ..+.|+++.+... .++++.+... +...+..++|+|+++ +|+
T Consensus 13 ~~~~~vg~y~~~-~~~~i~~~~~d~~------------------------~g~~~~~~~~-~~~~p~~l~~spdg~-~l~ 65 (361)
T 3scy_A 13 ELTMLVGTYTSG-NSKGIYTFRFNEE------------------------TGESLPLSDA-EVANPSYLIPSADGK-FVY 65 (361)
T ss_dssp EEEEEEEECCSS-SCCEEEEEEEETT------------------------TCCEEEEEEE-ECSCCCSEEECTTSS-EEE
T ss_pred ceEEEEEeccCC-CCCCEEEEEEeCC------------------------CCCEEEeecc-cCCCCceEEECCCCC-EEE
Confidence 578899999875 4567888888522 3455556666 888899999999997 556
Q ss_pred EEeCC----CeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCceeEEEecCCCCceEEEEe-CCCcEEEEeCCCCCCCCcc
Q 014454 143 TKTVS----AEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGS-DDAQICLWDINAAPKNKSL 217 (424)
Q Consensus 143 tg~~d----g~v~iw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~-~dg~i~iwd~~~~~~~~~~ 217 (424)
+++.+ +.|.+|++.... +....+.....+......+++ ++. +|++++ .++.|.+|++........+
T Consensus 66 ~~~~~~~~~~~v~~~~~~~~~------g~~~~~~~~~~~~~~p~~~~~--dg~-~l~~~~~~~~~v~~~~~~~~g~~~~~ 136 (361)
T 3scy_A 66 SVNEFSKDQAAVSAFAFDKEK------GTLHLLNTQKTMGADPCYLTT--NGK-NIVTANYSGGSITVFPIGQDGALLPA 136 (361)
T ss_dssp EEECCSSTTCEEEEEEEETTT------TEEEEEEEEECSSSCEEEEEE--CSS-EEEEEETTTTEEEEEEBCTTSCBCSC
T ss_pred EEEccCCCCCcEEEEEEeCCC------CcEEEeeEeccCCCCcEEEEE--CCC-EEEEEECCCCEEEEEEeCCCCcCccc
Confidence 66654 899999987510 112223344445666778888 566 455544 6899999999764332222
Q ss_pred cceeeee--------cCCccEeeEEEecCCCcEEEEEeCCCeEEEEEcCCCCC------CCC----eeeeeccCCCeeEE
Q 014454 218 EAMQIFK--------VHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSV------SKP----VQSVVAHQSEVNCL 279 (424)
Q Consensus 218 ~~~~~~~--------~~~~~v~~~~~~~~~~~~~~s~~~dg~i~i~d~~~~~~------~~~----~~~~~~~~~~v~~v 279 (424)
....... .+...+.+++|+|+++.++++...++.|.+|++..... ... ......+...+..+
T Consensus 137 ~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 216 (361)
T 3scy_A 137 SDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLADDLGTDQIHKFNINPNANADNKEKFLTKGTPEAFKVAPGSGPRHL 216 (361)
T ss_dssp SEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTCCTTTCCCCEEEEEEEEEECCTTCCEEEE
T ss_pred ceeEEccCCCCCccccCCCcceEEEECCCCCEEEEEeCCCCEEEEEEEcCCCCcccccceeecccccceecCCCCCCeEE
Confidence 1111111 12234688999999988887777789999999886442 110 11122345568899
Q ss_pred EecCCCCeEEEEEeCCCcEEEEECCCCCCc--ceEe---cCCCCCEEEEEEcCCCCcEEEEEEC-CCeEEEeeCCCCCcc
Q 014454 280 AFNPFNEWILATGSTDKTVKLFDLRKISTA--LHTF---DSHKEEVFQVGWNPKNETILASCCL-GRRLMVWDLSRIDEE 353 (424)
Q Consensus 280 ~~~~~~~~~l~tg~~dg~i~iwd~~~~~~~--~~~~---~~h~~~v~~~~~sp~~~~~l~s~~~-dg~i~iwd~~~~~~~ 353 (424)
+|+|+++++++++..++.|.+||+.+ +.. +..+ ..+......++|+|+++.++++... ++.|.+|++....
T Consensus 217 ~~spdg~~l~v~~~~~~~v~v~~~~~-g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~~~~-- 293 (361)
T 3scy_A 217 IFNSDGKFAYLINEIGGTVIAFRYAD-GMLDEIQTVAADTVNAQGSGDIHLSPDGKYLYASNRLKADGVAIFKVDETN-- 293 (361)
T ss_dssp EECTTSSEEEEEETTTCEEEEEEEET-TEEEEEEEEESCSSCCCCEEEEEECTTSSEEEEEECSSSCEEEEEEECTTT--
T ss_pred EEcCCCCEEEEEcCCCCeEEEEEecC-CceEEeEEEecCCCCCCCcccEEECCCCCEEEEECCCCCCEEEEEEEcCCC--
Confidence 99999986555555789999999985 332 2222 2334567899999999754455555 6899999986311
Q ss_pred cCCCCcCCCCCeeeEEEcCCCCCcceEEeCCCCCcEEEEEeCCCcEEEEecC--CccC
Q 014454 354 QTPEDAEDGPPELLFIHGGHTSKISDFSWNPCEDWVISSVAEDNILQIWQMA--ENIY 409 (424)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~vw~~~--~~~~ 409 (424)
+....+..... ...+.+++|+|++++++++...++.|.+|++. ++.+
T Consensus 294 --------g~~~~~~~~~~-g~~~~~~~~spdg~~l~~~~~~~~~v~v~~~d~~~g~~ 342 (361)
T 3scy_A 294 --------GTLTKVGYQLT-GIHPRNFIITPNGKYLLVACRDTNVIQIFERDQATGLL 342 (361)
T ss_dssp --------CCEEEEEEEEC-SSCCCEEEECTTSCEEEEEETTTTEEEEEEECTTTCCE
T ss_pred --------CcEEEeeEecC-CCCCceEEECCCCCEEEEEECCCCCEEEEEEECCCCcE
Confidence 01123333433 45688999999999655555578999996554 5544
No 132
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.92 E-value=8.8e-23 Score=182.25 Aligned_cols=243 Identities=11% Similarity=0.090 Sum_probs=175.5
Q ss_pred EEeccCCceeEEEecCCCCcEEEEEeCCCeEEEEeCCC-CCCCCCCCCCCCCcEEEecC-CCceeEEEecCCCCceEEEE
Q 014454 120 QQINHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSK-HPSKPPLDGACSPDLRLRGH-STEGYGLSWSKFKEGHLLSG 197 (424)
Q Consensus 120 ~~~~h~~~v~~~~~~p~~~~~latg~~dg~v~iw~~~~-~~~~~~~~~~~~~~~~~~~h-~~~v~~l~~~~~~~~~l~s~ 197 (424)
....|.+.|.+++|+|++. +|++++ ++.|++||+.. . ........+ ...+.+++|+|++. +|+++
T Consensus 36 ~~~~~~~~v~~~~~spdg~-~l~~~~-~~~i~~~d~~~~~----------~~~~~~~~~~~~~~~~~~~spdg~-~l~~~ 102 (297)
T 2ojh_A 36 VVWQTPELFEAPNWSPDGK-YLLLNS-EGLLYRLSLAGDP----------SPEKVDTGFATICNNDHGISPDGA-LYAIS 102 (297)
T ss_dssp EEEEESSCCEEEEECTTSS-EEEEEE-TTEEEEEESSSCC----------SCEECCCTTCCCBCSCCEECTTSS-EEEEE
T ss_pred eeccCCcceEeeEECCCCC-EEEEEc-CCeEEEEeCCCCC----------CceEeccccccccccceEECCCCC-EEEEE
Confidence 4556899999999999997 677665 78999999875 2 112223344 36789999999988 68887
Q ss_pred e--CCCcEEEEeCCCCCCCCcccceeeeecCCccEeeEEEecCCCcEEEEEeCCCeEEEEEcCCCCCCCCeeeeeccCCC
Q 014454 198 S--DDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSE 275 (424)
Q Consensus 198 ~--~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~ 275 (424)
+ .++...||.++.... ....+.. ...+..++|+|+++.++++++.++.++||+++.... ....+..+...
T Consensus 103 ~~~~~~~~~l~~~~~~~~-----~~~~~~~-~~~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~--~~~~~~~~~~~ 174 (297)
T 2ojh_A 103 DKVEFGKSAIYLLPSTGG-----TPRLMTK-NLPSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSG--VETRLTHGEGR 174 (297)
T ss_dssp ECTTTSSCEEEEEETTCC-----CCEECCS-SSSEEEEEECTTSSEEEEEEEETTEEEEEEEETTTC--CEEECCCSSSC
T ss_pred EeCCCCcceEEEEECCCC-----ceEEeec-CCCccceEECCCCCEEEEEECCCCceEEEEEECCCC--cceEcccCCCc
Confidence 7 334555555532211 1122222 334889999999988877888999999999754321 24556667888
Q ss_pred eeEEEecCCCCeEEEEEeCCCcEEEEECCCCCCcceEecCCCCCEEEEEEcCCCCcEEEEEECC-----------CeEEE
Q 014454 276 VNCLAFNPFNEWILATGSTDKTVKLFDLRKISTALHTFDSHKEEVFQVGWNPKNETILASCCLG-----------RRLMV 344 (424)
Q Consensus 276 v~~v~~~~~~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~l~s~~~d-----------g~i~i 344 (424)
+.+++|+|+++.+++++..++.+++|++......+..+..|...+.+++|+|+++ +|++++.+ +.|.+
T Consensus 175 ~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~-~l~~~~~~~~~~~~~~~~~~~l~~ 253 (297)
T 2ojh_A 175 NDGPDYSPDGRWIYFNSSRTGQMQIWRVRVDGSSVERITDSAYGDWFPHPSPSGD-KVVFVSYDADVFDHPRDLDVRVQL 253 (297)
T ss_dssp EEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCEEECCCCSEEEEEEEECTTSS-EEEEEEEETTCCSCCSSEEEEEEE
T ss_pred cccceECCCCCEEEEEecCCCCccEEEECCCCCCcEEEecCCcccCCeEECCCCC-EEEEEEcCCCCCcccccCceEEEE
Confidence 9999999999865555556899999998744567778888888999999999997 45555544 56999
Q ss_pred eeCCCCCcccCCCCcCCCCCeeeEEEcCCCCCcceEEeCCCCCcEEEEEeCC
Q 014454 345 WDLSRIDEEQTPEDAEDGPPELLFIHGGHTSKISDFSWNPCEDWVISSVAED 396 (424)
Q Consensus 345 wd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d 396 (424)
||+..... ..+....+|...+..++|+|+++++++++..+
T Consensus 254 ~d~~~~~~------------~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~ 293 (297)
T 2ojh_A 254 MDMDGGNV------------ETLFDLFGGQGTMNSPNWSPDGDEFAYVRYFP 293 (297)
T ss_dssp EETTSCSC------------EEEEEEEESTTTSCSCCBCTTSSEEEEEEECC
T ss_pred EecCCCCc------------eeeeccCCCCcccccceECCCCCEEEEEEecc
Confidence 99976432 34555557888899999999999644444443
No 133
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.92 E-value=9.6e-24 Score=199.21 Aligned_cols=216 Identities=13% Similarity=0.119 Sum_probs=156.6
Q ss_pred CceeEEEecCCCCcEEEEEeCCCeEEEEeCCCCCCCCCCCC------CCCCcEEEecCCCceeEEEecCCCCceEE----
Q 014454 126 GEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDG------ACSPDLRLRGHSTEGYGLSWSKFKEGHLL---- 195 (424)
Q Consensus 126 ~~v~~~~~~p~~~~~latg~~dg~v~iw~~~~~~~~~~~~~------~~~~~~~~~~h~~~v~~l~~~~~~~~~l~---- 195 (424)
..++.+++++++. ++++++.++ ++||+............ ...+.. ...+...|.+++|+|++. +|+
T Consensus 37 ~~~n~lavs~~~~-~l~~~~~dg-v~v~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~v~~l~~spdg~-~lav~~~ 112 (434)
T 2oit_A 37 ERSSLLAVSNKYG-LVFAGGASG-LQIFPTKNLLIQNKPGDDPNKIVDKVQGL-LVPMKFPIHHLALSCDNL-TLSACMM 112 (434)
T ss_dssp SCCBCEEEETTTT-EEEEEETTE-EEEEEHHHHCCCCCTTCCTTCEEECCCCE-EECCSSCEEEEEECTTSC-EEEEEEE
T ss_pred CCccEEEEecCCC-EEEEECCCE-EEEEEchHhhhhcccccCcccccccCccc-cccCCCcccEEEEcCCCC-EEEEEEe
Confidence 4578999999876 788888887 89988643111000000 011111 224677899999999988 677
Q ss_pred EEeCCCcEEEEeCCCC-----CCCCcccceeeeecCCccEeeEEEecCCCcEEEEEeCCCeEEEEEcCCCCCCCCeeeee
Q 014454 196 SGSDDAQICLWDINAA-----PKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVV 270 (424)
Q Consensus 196 s~~~dg~i~iwd~~~~-----~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~dg~i~i~d~~~~~~~~~~~~~~ 270 (424)
+|+.|+.|++||+.+. .....+.....+.+|...|.+++|+|++..+|++++.||+|++||++++.. +....
T Consensus 113 sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~Dg~v~iwD~~~~~~---~~~~~ 189 (434)
T 2oit_A 113 SSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADGSIAVLQVTETVK---VCATL 189 (434)
T ss_dssp ETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETTSCEEEEEESSSEE---EEEEE
T ss_pred ccCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEECCCeEEEEEcCCCcc---eeecc
Confidence 7889999999998754 111222234556779999999999998667889999999999999998642 44556
Q ss_pred ccCCCeeEEEecCCCCeEEEEEeCCCcEEEEECCCCCCcceEecCC-------CCCEEEEEEcCCCCcEEEEEECCCe--
Q 014454 271 AHQSEVNCLAFNPFNEWILATGSTDKTVKLFDLRKISTALHTFDSH-------KEEVFQVGWNPKNETILASCCLGRR-- 341 (424)
Q Consensus 271 ~~~~~v~~v~~~~~~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~~h-------~~~v~~~~~sp~~~~~l~s~~~dg~-- 341 (424)
.|...|++++|+|++. +|++|+.||.|++||++. .....+..| ...|.+++|++++..+++.++.||.
T Consensus 190 ~~~~~v~~v~wspdg~-~lasgs~dg~v~iwd~~~--~~~~~~~~~~~~~~~~~~~v~~v~w~~~~~~l~~~~~~dg~~~ 266 (434)
T 2oit_A 190 PSTVAVTSVCWSPKGK-QLAVGKQNGTVVQYLPTL--QEKKVIPCPPFYESDHPVRVLDVLWIGTYVFAIVYAAADGTLE 266 (434)
T ss_dssp CGGGCEEEEEECTTSS-CEEEEETTSCEEEECTTC--CEEEEECCCTTCCTTSCEEEEEEEEEETTEEEEEEEETTCCSS
T ss_pred CCCCceeEEEEcCCCC-EEEEEcCCCcEEEEccCC--cccccccCCcccCCCCceeEEEEEEecCceEEEEEccCCCccC
Confidence 6888999999999988 599999999999999982 334444333 3389999999988544444555543
Q ss_pred ----EEEeeCCCCC
Q 014454 342 ----LMVWDLSRID 351 (424)
Q Consensus 342 ----i~iwd~~~~~ 351 (424)
+++|+++...
T Consensus 267 ~~~~v~i~~l~~~~ 280 (434)
T 2oit_A 267 TSPDVVMALLPKKE 280 (434)
T ss_dssp SCCEEEEEECCCTT
T ss_pred CCCceEEEEeccCC
Confidence 8999998653
No 134
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.92 E-value=4.8e-22 Score=186.86 Aligned_cols=225 Identities=8% Similarity=0.054 Sum_probs=169.4
Q ss_pred EeccCCceeEEEecCCCCcEEEEEeCCC---eEEEEeCCCCCCCCCCCCCCCCcEEEecCCCceeEEEecCCCCceEEEE
Q 014454 121 QINHDGEVNRARYMPQNPFLIATKTVSA---EVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSG 197 (424)
Q Consensus 121 ~~~h~~~v~~~~~~p~~~~~latg~~dg---~v~iw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~ 197 (424)
...|.+.|.+++|+|+++ .||+++.++ .|++||+.+ .. ...+..|...+.+++|+|++..+++++
T Consensus 174 l~~~~~~v~~~~~Spdg~-~la~~s~~~~~~~i~~~d~~t----------g~-~~~l~~~~~~~~~~~~spdg~~la~~~ 241 (415)
T 2hqs_A 174 VHRSPQPLMSPAWSPDGS-KLAYVTFESGRSALVIQTLAN----------GA-VRQVASFPRHNGAPAFSPDGSKLAFAL 241 (415)
T ss_dssp EEEESSCEEEEEECTTSS-EEEEEECTTSSCEEEEEETTT----------CC-EEEEECCSSCEEEEEECTTSSEEEEEE
T ss_pred EeCCCCcceeeEEcCCCC-EEEEEEecCCCcEEEEEECCC----------Cc-EEEeecCCCcccCEEEcCCCCEEEEEE
Confidence 346889999999999997 677777775 999999987 22 345777888999999999998544477
Q ss_pred eCCCc--EEEEeCCCCCCCCcccceeeeecCCccEeeEEEecCCCcEEEEEeCCC--eEEEEEcCCCCCCCCeeeeeccC
Q 014454 198 SDDAQ--ICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQ--YLLIWDLRTPSVSKPVQSVVAHQ 273 (424)
Q Consensus 198 ~~dg~--i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~dg--~i~i~d~~~~~~~~~~~~~~~~~ 273 (424)
+.++. |++||+.++. ...+..|...+.+++|+|+++.+++++..++ .|.+||+.++. ...+..+.
T Consensus 242 ~~~g~~~i~~~d~~~~~-------~~~l~~~~~~~~~~~~spdg~~l~~~s~~~g~~~i~~~d~~~~~----~~~l~~~~ 310 (415)
T 2hqs_A 242 SKTGSLNLYVMDLASGQ-------IRQVTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGA----PQRITWEG 310 (415)
T ss_dssp CTTSSCEEEEEETTTCC-------EEECCCCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSC----CEECCCSS
T ss_pred ecCCCceEEEEECCCCC-------EEeCcCCCCcccceEECCCCCEEEEEECCCCCcEEEEEECCCCC----EEEEecCC
Confidence 76665 9999997652 2345567888999999999986664444455 67777888755 23444567
Q ss_pred CCeeEEEecCCCCeEEEEEeCC--CcEEEEECCCCCCcceEecCCCCCEEEEEEcCCCCcEEEEEECCC---eEEEeeCC
Q 014454 274 SEVNCLAFNPFNEWILATGSTD--KTVKLFDLRKISTALHTFDSHKEEVFQVGWNPKNETILASCCLGR---RLMVWDLS 348 (424)
Q Consensus 274 ~~v~~v~~~~~~~~~l~tg~~d--g~i~iwd~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~l~s~~~dg---~i~iwd~~ 348 (424)
..+.+++|+|+++++++++..+ ..|++||+.+ ++. ..+..+. .+.+++|+|+++ +|++++.++ .|.+||+.
T Consensus 311 ~~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~-~~~-~~l~~~~-~~~~~~~spdg~-~l~~~s~~~~~~~l~~~d~~ 386 (415)
T 2hqs_A 311 SQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLAT-GGV-QVLSSTF-LDETPSLAPNGT-MVIYSSSQGMGSVLNLVSTD 386 (415)
T ss_dssp SEEEEEEECTTSSEEEEEEECSSCEEEEEEETTT-CCE-EECCCSS-SCEEEEECTTSS-EEEEEEEETTEEEEEEEETT
T ss_pred CcccCeEECCCCCEEEEEECcCCceEEEEEECCC-CCE-EEecCCC-CcCCeEEcCCCC-EEEEEEcCCCccEEEEEECC
Confidence 7899999999999644444442 5899999987 343 4555554 899999999997 566666555 79999987
Q ss_pred CCCcccCCCCcCCCCCeeeEEEcCCCCCcceEEeCCCCC
Q 014454 349 RIDEEQTPEDAEDGPPELLFIHGGHTSKISDFSWNPCED 387 (424)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~ 387 (424)
. .....+.+|.+.|.+++|+|...
T Consensus 387 g---------------~~~~~l~~~~~~v~~~~~~~~~~ 410 (415)
T 2hqs_A 387 G---------------RFKARLPATDGQVKFPAWSPYLH 410 (415)
T ss_dssp S---------------CCEEECCCSSSEEEEEEECCCCC
T ss_pred C---------------CcEEEeeCCCCCCcCCccccccc
Confidence 4 34566788889999999999754
No 135
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.91 E-value=4.3e-22 Score=193.03 Aligned_cols=252 Identities=11% Similarity=0.081 Sum_probs=190.8
Q ss_pred eeEEEecCCCCcEEEEEeCCCeEEEEeC--CCCCCCCCCCCCCCCcEEEecCCCceeEEEecC----CCCceEEEEe-CC
Q 014454 128 VNRARYMPQNPFLIATKTVSAEVYVFDY--SKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSK----FKEGHLLSGS-DD 200 (424)
Q Consensus 128 v~~~~~~p~~~~~latg~~dg~v~iw~~--~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~----~~~~~l~s~~-~d 200 (424)
+..++|+|+++ +|++++.++.|++||+ .+ ......+. +...+..++|+| +++ +|++++ .+
T Consensus 181 ~~~v~~spdg~-~l~v~~~d~~V~v~D~~~~t----------~~~~~~i~-~g~~p~~va~sp~~~~dg~-~l~v~~~~~ 247 (543)
T 1nir_A 181 VHISRMSASGR-YLLVIGRDARIDMIDLWAKE----------PTKVAEIK-IGIEARSVESSKFKGYEDR-YTIAGAYWP 247 (543)
T ss_dssp EEEEEECTTSC-EEEEEETTSEEEEEETTSSS----------CEEEEEEE-CCSEEEEEEECCSTTCTTT-EEEEEEEES
T ss_pred cceEEECCCCC-EEEEECCCCeEEEEECcCCC----------CcEEEEEe-cCCCcceEEeCCCcCCCCC-EEEEEEccC
Confidence 89999999997 6778888999999999 44 34455565 556789999999 998 577766 58
Q ss_pred CcEEEEeCCCCCCCCcccceeeeec----------CC-ccEeeEEEecCCCcEEEEEeCCCeEEEEEcCCCCCCCCeeee
Q 014454 201 AQICLWDINAAPKNKSLEAMQIFKV----------HE-GVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSV 269 (424)
Q Consensus 201 g~i~iwd~~~~~~~~~~~~~~~~~~----------~~-~~v~~~~~~~~~~~~~~s~~~dg~i~i~d~~~~~~~~~~~~~ 269 (424)
++|.+||..+.+. +..+.. |. ..+..+.++|+++.++++...++.|.+||+.+.+... +..+
T Consensus 248 ~~v~v~D~~t~~~------~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~~g~i~vvd~~~~~~l~-~~~i 320 (543)
T 1nir_A 248 PQFAIMDGETLEP------KQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKDIDNLT-VTSI 320 (543)
T ss_dssp SEEEEEETTTCCE------EEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEECTTSSSCE-EEEE
T ss_pred CeEEEEecccccc------ceeecccCcccCccccccCCceEEEEECCCCCEEEEEECCCCeEEEEEecCCCcce-eEEe
Confidence 9999999876643 222221 22 3789999999999899999999999999998865421 2233
Q ss_pred eccCCCeeEEEecCCCCeEEEEEeCCCcEEEEECCCCCCcceEecC----CCCCEEEEEEcCCCCcEEEEEE-CCCeEEE
Q 014454 270 VAHQSEVNCLAFNPFNEWILATGSTDKTVKLFDLRKISTALHTFDS----HKEEVFQVGWNPKNETILASCC-LGRRLMV 344 (424)
Q Consensus 270 ~~~~~~v~~v~~~~~~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~~----h~~~v~~~~~sp~~~~~l~s~~-~dg~i~i 344 (424)
.+...+..++|+|+++++++++..+++|.+||+.+ ++++..+.. |.+....+ ++|++..+++++. .|++|.+
T Consensus 321 -~~~~~~~~~~~spdg~~l~va~~~~~~v~v~D~~t-g~l~~~i~~g~~ph~g~g~~~-~~p~~g~~~~s~~~~d~~V~v 397 (543)
T 1nir_A 321 -GAAPFLHDGGWDSSHRYFMTAANNSNKVAVIDSKD-RRLSALVDVGKTPHPGRGANF-VHPKYGPVWSTSHLGDGSISL 397 (543)
T ss_dssp -ECCSSCCCEEECTTSCEEEEEEGGGTEEEEEETTT-TEEEEEEECSSSBCCTTCEEE-EETTTEEEEEEEBSSSSEEEE
T ss_pred -ccCcCccCceECCCCCEEEEEecCCCeEEEEECCC-CeEEEeeccCCCCCCCCCccc-CCCCCccEEEeccCCCceEEE
Confidence 35667889999999998777777789999999998 677777664 55444443 5787556788876 5899999
Q ss_pred eeCCCCCcccCCCCcCCCCCeeeEEEcCCCCCcceEEeCCCCCcEEEEEe-------CCCcEEEEecCCccCC
Q 014454 345 WDLSRIDEEQTPEDAEDGPPELLFIHGGHTSKISDFSWNPCEDWVISSVA-------EDNILQIWQMAENIYH 410 (424)
Q Consensus 345 wd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~-------~dg~i~vw~~~~~~~~ 410 (424)
||+...... ....+++..+.+|...+..++++|++++ |++++ .+++|.|||+.+....
T Consensus 398 ~d~~~~~~~-------~~~~~~v~~l~~~g~~~~~v~~~pdg~~-l~v~~~~~~~~~~~~~v~v~d~~~~~~~ 462 (543)
T 1nir_A 398 IGTDPKNHP-------QYAWKKVAELQGQGGGSLFIKTHPKSSH-LYVDTTFNPDARISQSVAVFDLKNLDAK 462 (543)
T ss_dssp EECCTTTCT-------TTBTSEEEEEECSCSCCCCEECCTTCCE-EEECCTTCSSHHHHTCEEEEETTCTTSC
T ss_pred EEeCCCCCc-------hhcCeEEEEEEcCCCCceEEEcCCCCCc-EEEecCCCCCcccCceEEEEECCCCCCC
Confidence 999863211 0113678888899888999999999994 66655 2779999999987543
No 136
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.91 E-value=1.2e-21 Score=189.94 Aligned_cols=264 Identities=13% Similarity=0.155 Sum_probs=196.1
Q ss_pred EEEEEEeccCCceeEEEecC----CCCcEEEEEe-CCCeEEEEeCCCCCCCCCCCCCCCCcEEEec----------CCC-
Q 014454 116 VQIIQQINHDGEVNRARYMP----QNPFLIATKT-VSAEVYVFDYSKHPSKPPLDGACSPDLRLRG----------HST- 179 (424)
Q Consensus 116 ~~~~~~~~h~~~v~~~~~~p----~~~~~latg~-~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~----------h~~- 179 (424)
.+++..+.+...+..++|+| +++. +++++ .+++|.|||..+ .+++..+.. |..
T Consensus 212 ~~~~~~i~~g~~p~~va~sp~~~~dg~~-l~v~~~~~~~v~v~D~~t----------~~~~~~i~~~g~~~~~~~~~~~~ 280 (543)
T 1nir_A 212 PTKVAEIKIGIEARSVESSKFKGYEDRY-TIAGAYWPPQFAIMDGET----------LEPKQIVSTRGMTVDTQTYHPEP 280 (543)
T ss_dssp CEEEEEEECCSEEEEEEECCSTTCTTTE-EEEEEEESSEEEEEETTT----------CCEEEEEECCEECSSSCCEESCC
T ss_pred CcEEEEEecCCCcceEEeCCCcCCCCCE-EEEEEccCCeEEEEeccc----------cccceeecccCcccCccccccCC
Confidence 44566777888899999999 9984 55555 589999999876 344455543 223
Q ss_pred ceeEEEecCCCCceEEEEeCCCcEEEEeCCCCCCCCcccceeeeecCCccEeeEEEecCCCcEEEEEeCCCeEEEEEcCC
Q 014454 180 EGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRT 259 (424)
Q Consensus 180 ~v~~l~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~dg~i~i~d~~~ 259 (424)
.+.++.++|++..++++...++.|.+||+.+..... +..+ .+...+.++.|+|+++++++++..+++|.+||+.+
T Consensus 281 ~v~~i~~s~~~~~~~vs~~~~g~i~vvd~~~~~~l~----~~~i-~~~~~~~~~~~spdg~~l~va~~~~~~v~v~D~~t 355 (543)
T 1nir_A 281 RVAAIIASHEHPEFIVNVKETGKVLLVNYKDIDNLT----VTSI-GAAPFLHDGGWDSSHRYFMTAANNSNKVAVIDSKD 355 (543)
T ss_dssp CEEEEEECSSSSEEEEEETTTTEEEEEECTTSSSCE----EEEE-ECCSSCCCEEECTTSCEEEEEEGGGTEEEEEETTT
T ss_pred ceEEEEECCCCCEEEEEECCCCeEEEEEecCCCcce----eEEe-ccCcCccCceECCCCCEEEEEecCCCeEEEEECCC
Confidence 688999999888778888899999999998753321 1122 35667889999999998887777899999999998
Q ss_pred CCCCCCeeeeec----cCCCeeEEEecCCCCeEEEEEe-CCCcEEEEECCCC------CCcceEecCCCCCEEEEEEcCC
Q 014454 260 PSVSKPVQSVVA----HQSEVNCLAFNPFNEWILATGS-TDKTVKLFDLRKI------STALHTFDSHKEEVFQVGWNPK 328 (424)
Q Consensus 260 ~~~~~~~~~~~~----~~~~v~~v~~~~~~~~~l~tg~-~dg~i~iwd~~~~------~~~~~~~~~h~~~v~~~~~sp~ 328 (424)
++. +..+.. |......+ ++|++..+++++. .|++|.+||+.+. .+.++++..|...+..++++|+
T Consensus 356 g~l---~~~i~~g~~ph~g~g~~~-~~p~~g~~~~s~~~~d~~V~v~d~~~~~~~~~~~~~v~~l~~~g~~~~~v~~~pd 431 (543)
T 1nir_A 356 RRL---SALVDVGKTPHPGRGANF-VHPKYGPVWSTSHLGDGSISLIGTDPKNHPQYAWKKVAELQGQGGGSLFIKTHPK 431 (543)
T ss_dssp TEE---EEEEECSSSBCCTTCEEE-EETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECSCSCCCCEECCTT
T ss_pred CeE---EEeeccCCCCCCCCCccc-CCCCCccEEEeccCCCceEEEEEeCCCCCchhcCeEEEEEEcCCCCceEEEcCCC
Confidence 764 444432 54444443 4787566788876 5899999999862 4678899999889999999999
Q ss_pred CCcEEEEEE-------CCCeEEEeeCCCCCcccCCCCcCCCCCeeeEE-----EcCCCCCcceEEeCCCCCcEEEEEe--
Q 014454 329 NETILASCC-------LGRRLMVWDLSRIDEEQTPEDAEDGPPELLFI-----HGGHTSKISDFSWNPCEDWVISSVA-- 394 (424)
Q Consensus 329 ~~~~l~s~~-------~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~-----~~~h~~~v~~~~~~~~~~~~l~s~~-- 394 (424)
++ .|++++ .+++|.+||+.+..... +.+-. +..+...+..+.|+|+|+.++++..
T Consensus 432 g~-~l~v~~~~~~~~~~~~~v~v~d~~~~~~~~----------~~~~v~~~~~~~~~~~~~~~~~~~~~g~~~~~s~~~~ 500 (543)
T 1nir_A 432 SS-HLYVDTTFNPDARISQSVAVFDLKNLDAKY----------QVLPIAEWADLGEGAKRVVQPEYNKRGDEVWFSVWNG 500 (543)
T ss_dssp CC-EEEECCTTCSSHHHHTCEEEEETTCTTSCC----------EEECHHHHHCCCSSCCEEEEEEECSSSSEEEEEEECC
T ss_pred CC-cEEEecCCCCCcccCceEEEEECCCCCCCe----------EEeechhhcccCCCCCceEeccCCCCCCEEEEEeecC
Confidence 97 576765 26799999999865321 11100 1345667999999999997666643
Q ss_pred --CCCcEEEEecCCccCC
Q 014454 395 --EDNILQIWQMAENIYH 410 (424)
Q Consensus 395 --~dg~i~vw~~~~~~~~ 410 (424)
.++.|.|||..++.+.
T Consensus 501 ~~~~~~i~v~D~~t~~~~ 518 (543)
T 1nir_A 501 KNDSSALVVVDDKTLKLK 518 (543)
T ss_dssp TTSCCEEEEEETTTTEEE
T ss_pred CCCCCeEEEEECCCceEE
Confidence 4799999999998654
No 137
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.91 E-value=2.4e-21 Score=177.95 Aligned_cols=250 Identities=9% Similarity=0.074 Sum_probs=183.3
Q ss_pred eccCCceeEEEecCCCCcEEEEEeC------CCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCceeEEEecCCCCceEE
Q 014454 122 INHDGEVNRARYMPQNPFLIATKTV------SAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLL 195 (424)
Q Consensus 122 ~~h~~~v~~~~~~p~~~~~latg~~------dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~ 195 (424)
......+..++|+|+++.++++... ++.|.+||..+ ......+. ....+.+++|+|++..+++
T Consensus 37 ~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~v~~~d~~~----------~~~~~~~~-~~~~~~~~~~s~dg~~l~v 105 (353)
T 3vgz_A 37 KAVGKGAYEMAYSQQENALWLATSQSRKLDKGGVVYRLDPVT----------LEVTQAIH-NDLKPFGATINNTTQTLWF 105 (353)
T ss_dssp EEEESSEEEEEEETTTTEEEEEECCCTTTEESEEEEEECTTT----------CCEEEEEE-ESSCCCSEEEETTTTEEEE
T ss_pred hhhccCccceEECCCCCEEEEEcCCCcCCCCCccEEEEcCCC----------CeEEEEEe-cCCCcceEEECCCCCEEEE
Confidence 4455678899999998755554433 67899999887 33344444 3445789999999985566
Q ss_pred EEeCCCcEEEEeCCCCCCCCcccceeeeecCCc---------cEeeEEEecCCCcEEEEE-eCCCeEEEEEcCCCCCCCC
Q 014454 196 SGSDDAQICLWDINAAPKNKSLEAMQIFKVHEG---------VVEDVAWHLRHEYLFGSV-GDDQYLLIWDLRTPSVSKP 265 (424)
Q Consensus 196 s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~---------~v~~~~~~~~~~~~~~s~-~~dg~i~i~d~~~~~~~~~ 265 (424)
++..++.|.+||+.+++. +..+..+.. .+.+++|+|+++.++++. +.++.|.+||+.+++.
T Consensus 106 ~~~~~~~v~~~d~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~--- 176 (353)
T 3vgz_A 106 GNTVNSAVTAIDAKTGEV------KGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGGNIKL--- 176 (353)
T ss_dssp EETTTTEEEEEETTTCCE------EEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEETTTTEE---
T ss_pred EecCCCEEEEEeCCCCee------EEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceEEEEcCCCCce---
Confidence 667789999999987643 222332221 278899999998777666 3588999999988653
Q ss_pred eeeeeccCCCeeEEEecCCCCeEEEEEeCCCcEEEEECCCCCCcceEecC----CCCCEEEEEEcCCCCcEEEEEECCCe
Q 014454 266 VQSVVAHQSEVNCLAFNPFNEWILATGSTDKTVKLFDLRKISTALHTFDS----HKEEVFQVGWNPKNETILASCCLGRR 341 (424)
Q Consensus 266 ~~~~~~~~~~v~~v~~~~~~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~~----h~~~v~~~~~sp~~~~~l~s~~~dg~ 341 (424)
+..+..+...+.+++|+|+++. +++++.++.|.+||+.+ ++.+..+.. +...+.+++|+|+++.++++...++.
T Consensus 177 ~~~~~~~~~~~~~~~~s~dg~~-l~~~~~~~~i~~~d~~~-~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~ 254 (353)
T 3vgz_A 177 KTAIQNTGKMSTGLALDSEGKR-LYTTNADGELITIDTAD-NKILSRKKLLDDGKEHFFINISLDTARQRAFITDSKAAE 254 (353)
T ss_dssp EEEECCCCTTCCCCEEETTTTE-EEEECTTSEEEEEETTT-TEEEEEEECCCSSSCCCEEEEEEETTTTEEEEEESSSSE
T ss_pred EEEecCCCCccceEEECCCCCE-EEEEcCCCeEEEEECCC-CeEEEEEEcCCCCCCcccceEEECCCCCEEEEEeCCCCE
Confidence 4444445666889999999985 77777899999999987 566655553 45578899999999866666666799
Q ss_pred EEEeeCCCCCcccCCCCcCCCCCeeeEEEcCCCCCcceEEeCCCCCcEEEEEeCCCcEEEEecCCccC
Q 014454 342 LMVWDLSRIDEEQTPEDAEDGPPELLFIHGGHTSKISDFSWNPCEDWVISSVAEDNILQIWQMAENIY 409 (424)
Q Consensus 342 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~ 409 (424)
|.+||+.++. .+....... ...++|+|++++++++...++.|.+||+.++..
T Consensus 255 v~~~d~~~~~--------------~~~~~~~~~--~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~ 306 (353)
T 3vgz_A 255 VLVVDTRNGN--------------ILAKVAAPE--SLAVLFNPARNEAYVTHRQAGKVSVIDAKSYKV 306 (353)
T ss_dssp EEEEETTTCC--------------EEEEEECSS--CCCEEEETTTTEEEEEETTTTEEEEEETTTTEE
T ss_pred EEEEECCCCc--------------EEEEEEcCC--CceEEECCCCCEEEEEECCCCeEEEEECCCCeE
Confidence 9999997753 233333222 367999999997777776899999999987643
No 138
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.90 E-value=2.2e-21 Score=176.75 Aligned_cols=246 Identities=9% Similarity=0.073 Sum_probs=176.2
Q ss_pred EEecCCCCcEEEEEeCCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCceeEEEecCCCCceEEEEeCCCcEEEEeCCC
Q 014454 131 ARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINA 210 (424)
Q Consensus 131 ~~~~p~~~~~latg~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~iwd~~~ 210 (424)
..|.+++..++++++.++.|++||..+ .+....+..+...+ +++|+|++..+++++..++.|.+||+.+
T Consensus 3 ~~~~~~~~~~~v~~~~~~~v~~~d~~~----------~~~~~~~~~~~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~ 71 (331)
T 3u4y_A 3 AMFQTTSNFGIVVEQHLRRISFFSTDT----------LEILNQITLGYDFV-DTAITSDCSNVVVTSDFCQTLVQIETQL 71 (331)
T ss_dssp ----CCCCEEEEEEGGGTEEEEEETTT----------CCEEEEEECCCCEE-EEEECSSSCEEEEEESTTCEEEEEECSS
T ss_pred eeEcCCCCEEEEEecCCCeEEEEeCcc----------cceeeeEEccCCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCC
Confidence 346666777899999999999999987 34445555556667 9999999984444455589999999987
Q ss_pred CCCCCcccceeeeecCCccEeeEEEecCCCcEEEEEeCC-C--eEEEEEcCCCCCCCCeeeeeccCCCeeEEEecCCCCe
Q 014454 211 APKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDD-Q--YLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEW 287 (424)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~d-g--~i~i~d~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~ 287 (424)
+.. ....+..+..+..+++|+|+++.++ ++..+ + .|.+||+.+++. +..+. ......+++|+|++++
T Consensus 72 ~~~-----~~~~~~~~~~~~~~~~~s~dg~~l~-~~~~~~~~~~i~v~d~~~~~~---~~~~~-~~~~~~~~~~spdg~~ 141 (331)
T 3u4y_A 72 EPP-----KVVAIQEGQSSMADVDITPDDQFAV-TVTGLNHPFNMQSYSFLKNKF---ISTIP-IPYDAVGIAISPNGNG 141 (331)
T ss_dssp SSC-----EEEEEEECSSCCCCEEECTTSSEEE-ECCCSSSSCEEEEEETTTTEE---EEEEE-CCTTEEEEEECTTSSC
T ss_pred Cce-----eEEecccCCCCccceEECCCCCEEE-EecCCCCcccEEEEECCCCCe---EEEEE-CCCCccceEECCCCCE
Confidence 632 1334445555555599999998766 54444 3 899999988653 44443 3456799999999987
Q ss_pred EEEEEeCCCc-EEEEECCCCCCcc---eEecCCCCCEEEEEEcCCCCcEEEEEECCCeEEEeeCCCCCcccCCCCcCCCC
Q 014454 288 ILATGSTDKT-VKLFDLRKISTAL---HTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPEDAEDGP 363 (424)
Q Consensus 288 ~l~tg~~dg~-i~iwd~~~~~~~~---~~~~~h~~~v~~~~~sp~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~ 363 (424)
+++++..++. |.+|++...+... .........+..++|+|+++.+++++..++.|.+||+..+..
T Consensus 142 l~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~----------- 210 (331)
T 3u4y_A 142 LILIDRSSANTVRRFKIDADGVLFDTGQEFISGGTRPFNITFTPDGNFAFVANLIGNSIGILETQNPEN----------- 210 (331)
T ss_dssp EEEEEETTTTEEEEEEECTTCCEEEEEEEEECSSSSEEEEEECTTSSEEEEEETTTTEEEEEECSSTTS-----------
T ss_pred EEEEecCCCceEEEEEECCCCcEeecCCccccCCCCccceEECCCCCEEEEEeCCCCeEEEEECCCCcc-----------
Confidence 7777777788 9999998633321 112234566899999999976667777799999999986532
Q ss_pred CeeeEEEcCCCCCcceEEeCCCCCcEEEEEeCCCcEEEEecCCccC
Q 014454 364 PELLFIHGGHTSKISDFSWNPCEDWVISSVAEDNILQIWQMAENIY 409 (424)
Q Consensus 364 ~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~ 409 (424)
...+..+..+ ..+..++|+|++++++++...++.|.+||+.++.+
T Consensus 211 ~~~~~~~~~~-~~~~~~~~spdg~~l~v~~~~~~~i~~~d~~~~~~ 255 (331)
T 3u4y_A 211 ITLLNAVGTN-NLPGTIVVSRDGSTVYVLTESTVDVFNFNQLSGTL 255 (331)
T ss_dssp CEEEEEEECS-SCCCCEEECTTSSEEEEECSSEEEEEEEETTTTEE
T ss_pred cceeeeccCC-CCCceEEECCCCCEEEEEEcCCCEEEEEECCCCce
Confidence 0113344433 56789999999997666666788999999988765
No 139
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.89 E-value=1.7e-22 Score=190.76 Aligned_cols=210 Identities=14% Similarity=0.157 Sum_probs=153.0
Q ss_pred CceeEEEecCCCCceEEEEeCCCcEEEEeCCCCCCC-------Cccc--ceeeeecCCccEeeEEEecCCCcEEE---EE
Q 014454 179 TEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKN-------KSLE--AMQIFKVHEGVVEDVAWHLRHEYLFG---SV 246 (424)
Q Consensus 179 ~~v~~l~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~-------~~~~--~~~~~~~~~~~v~~~~~~~~~~~~~~---s~ 246 (424)
..+..+++++.+. ++++++.++ +++|+....... .... .......+...|.+++|+|++..+++ ++
T Consensus 37 ~~~n~lavs~~~~-~l~~~~~dg-v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~lav~~~sg 114 (434)
T 2oit_A 37 ERSSLLAVSNKYG-LVFAGGASG-LQIFPTKNLLIQNKPGDDPNKIVDKVQGLLVPMKFPIHHLALSCDNLTLSACMMSS 114 (434)
T ss_dssp SCCBCEEEETTTT-EEEEEETTE-EEEEEHHHHCCCCCTTCCTTCEEECCCCEEECCSSCEEEEEECTTSCEEEEEEEET
T ss_pred CCccEEEEecCCC-EEEEECCCE-EEEEEchHhhhhcccccCcccccccCccccccCCCcccEEEEcCCCCEEEEEEecc
Confidence 3577899999776 788888887 888875421110 0000 00011235678999999999976554 77
Q ss_pred eCCCeEEEEEcCCC-----CCCCC---eeeeeccCCCeeEEEecCCCCeEEEEEeCCCcEEEEECCCCCCcceEecCCCC
Q 014454 247 GDDQYLLIWDLRTP-----SVSKP---VQSVVAHQSEVNCLAFNPFNEWILATGSTDKTVKLFDLRKISTALHTFDSHKE 318 (424)
Q Consensus 247 ~~dg~i~i~d~~~~-----~~~~~---~~~~~~~~~~v~~v~~~~~~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~~h~~ 318 (424)
+.|+.|+|||+++. ...++ +..+.+|...|++++|+|++..+|++++.||+|++||+++ +..+.....|..
T Consensus 115 s~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~Dg~v~iwD~~~-~~~~~~~~~~~~ 193 (434)
T 2oit_A 115 EYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADGSIAVLQVTE-TVKVCATLPSTV 193 (434)
T ss_dssp TTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETTSCEEEEEESS-SEEEEEEECGGG
T ss_pred CCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEECCCeEEEEEcCC-CcceeeccCCCC
Confidence 88999999999764 11112 3445668999999999998555899999999999999998 455556667889
Q ss_pred CEEEEEEcCCCCcEEEEEECCCeEEEeeCCCCCcccCCCCcCCCCCeeeEEEc-------CCCCCcceEEeCCCCCcEEE
Q 014454 319 EVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPEDAEDGPPELLFIHG-------GHTSKISDFSWNPCEDWVIS 391 (424)
Q Consensus 319 ~v~~~~~sp~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~-------~h~~~v~~~~~~~~~~~~l~ 391 (424)
.|.+++|+|++. +|++|+.||.|++||++ +.. ...+. .|...|.+++|++++.++++
T Consensus 194 ~v~~v~wspdg~-~lasgs~dg~v~iwd~~-~~~--------------~~~~~~~~~~~~~~~~~v~~v~w~~~~~~l~~ 257 (434)
T 2oit_A 194 AVTSVCWSPKGK-QLAVGKQNGTVVQYLPT-LQE--------------KKVIPCPPFYESDHPVRVLDVLWIGTYVFAIV 257 (434)
T ss_dssp CEEEEEECTTSS-CEEEEETTSCEEEECTT-CCE--------------EEEECCCTTCCTTSCEEEEEEEEEETTEEEEE
T ss_pred ceeEEEEcCCCC-EEEEEcCCCcEEEEccC-Ccc--------------cccccCCcccCCCCceeEEEEEEecCceEEEE
Confidence 999999999986 69999999999999998 221 11111 23347899999998885555
Q ss_pred EEeCCCc------EEEEecCCc
Q 014454 392 SVAEDNI------LQIWQMAEN 407 (424)
Q Consensus 392 s~~~dg~------i~vw~~~~~ 407 (424)
.++.+|. +++|++...
T Consensus 258 ~~~~dg~~~~~~~v~i~~l~~~ 279 (434)
T 2oit_A 258 YAAADGTLETSPDVVMALLPKK 279 (434)
T ss_dssp EEETTCCSSSCCEEEEEECCCT
T ss_pred EccCCCccCCCCceEEEEeccC
Confidence 5556543 899999764
No 140
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.89 E-value=3.5e-21 Score=171.85 Aligned_cols=228 Identities=10% Similarity=0.011 Sum_probs=164.8
Q ss_pred EEeCCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCceeEEEecCCCCceEEEEeCCCcEEEEeCCC-CCCCCccccee
Q 014454 143 TKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINA-APKNKSLEAMQ 221 (424)
Q Consensus 143 tg~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~iwd~~~-~~~~~~~~~~~ 221 (424)
.++.++.|++||+.. .....+..|...+.+++|+|++. +|++++ ++.|.+||+.+ +.. ..
T Consensus 17 ~~~~~~~i~~~d~~~-----------~~~~~~~~~~~~v~~~~~spdg~-~l~~~~-~~~i~~~d~~~~~~~------~~ 77 (297)
T 2ojh_A 17 GGSMRSSIEIFNIRT-----------RKMRVVWQTPELFEAPNWSPDGK-YLLLNS-EGLLYRLSLAGDPSP------EK 77 (297)
T ss_dssp -CCCCEEEEEEETTT-----------TEEEEEEEESSCCEEEEECTTSS-EEEEEE-TTEEEEEESSSCCSC------EE
T ss_pred CCCcceeEEEEeCCC-----------CceeeeccCCcceEeeEECCCCC-EEEEEc-CCeEEEEeCCCCCCc------eE
Confidence 346789999999976 22345667899999999999998 677776 78999999987 532 22
Q ss_pred eeecC-CccEeeEEEecCCCcEEEEEe--CCCeEEEEEc--CCCCCCCCeeeeeccCCCeeEEEecCCCCeEEEEEeCCC
Q 014454 222 IFKVH-EGVVEDVAWHLRHEYLFGSVG--DDQYLLIWDL--RTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATGSTDK 296 (424)
Q Consensus 222 ~~~~~-~~~v~~~~~~~~~~~~~~s~~--~dg~i~i~d~--~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~l~tg~~dg 296 (424)
....+ ...+.+++|+|++..++ +++ .++...||.+ ..+. ...+.. ...+.+++|+|+++.++++++.++
T Consensus 78 ~~~~~~~~~~~~~~~spdg~~l~-~~~~~~~~~~~l~~~~~~~~~----~~~~~~-~~~~~~~~~spdg~~l~~~~~~~~ 151 (297)
T 2ojh_A 78 VDTGFATICNNDHGISPDGALYA-ISDKVEFGKSAIYLLPSTGGT----PRLMTK-NLPSYWHGWSPDGKSFTYCGIRDQ 151 (297)
T ss_dssp CCCTTCCCBCSCCEECTTSSEEE-EEECTTTSSCEEEEEETTCCC----CEECCS-SSSEEEEEECTTSSEEEEEEEETT
T ss_pred eccccccccccceEECCCCCEEE-EEEeCCCCcceEEEEECCCCc----eEEeec-CCCccceEECCCCCEEEEEECCCC
Confidence 23334 46789999999998654 665 3345555554 4433 233333 335899999999997666888899
Q ss_pred cEEEEECCCCCCcceEecCCCCCEEEEEEcCCCCcEEEEEECCCeEEEeeCCCCCcccCCCCcCCCCCeeeEEEcCCCCC
Q 014454 297 TVKLFDLRKISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPEDAEDGPPELLFIHGGHTSK 376 (424)
Q Consensus 297 ~i~iwd~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~ 376 (424)
.++||+++........+..+...+.+++|+|+++.+++++..++.++||++.... ..+..+..|...
T Consensus 152 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~-------------~~~~~~~~~~~~ 218 (297)
T 2ojh_A 152 VFDIYSMDIDSGVETRLTHGEGRNDGPDYSPDGRWIYFNSSRTGQMQIWRVRVDG-------------SSVERITDSAYG 218 (297)
T ss_dssp EEEEEEEETTTCCEEECCCSSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTS-------------SCEEECCCCSEE
T ss_pred ceEEEEEECCCCcceEcccCCCccccceECCCCCEEEEEecCCCCccEEEECCCC-------------CCcEEEecCCcc
Confidence 9999997543455667777888999999999997555555568999999986321 224445566777
Q ss_pred cceEEeCCCCCcEEEEEeCC-----------CcEEEEecCCccC
Q 014454 377 ISDFSWNPCEDWVISSVAED-----------NILQIWQMAENIY 409 (424)
Q Consensus 377 v~~~~~~~~~~~~l~s~~~d-----------g~i~vw~~~~~~~ 409 (424)
+..++|+|++++ |++++.+ +.|.+|++.++..
T Consensus 219 ~~~~~~s~dg~~-l~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~ 261 (297)
T 2ojh_A 219 DWFPHPSPSGDK-VVFVSYDADVFDHPRDLDVRVQLMDMDGGNV 261 (297)
T ss_dssp EEEEEECTTSSE-EEEEEEETTCCSCCSSEEEEEEEEETTSCSC
T ss_pred cCCeEECCCCCE-EEEEEcCCCCCcccccCceEEEEEecCCCCc
Confidence 889999999995 5554444 5699999987643
No 141
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.89 E-value=2.1e-21 Score=177.40 Aligned_cols=246 Identities=11% Similarity=0.114 Sum_probs=166.8
Q ss_pred CCcEEEEEeCCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCceeEEEecCCCCceEEEEeCC-CcEEEEeCCCCCCCC
Q 014454 137 NPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDD-AQICLWDINAAPKNK 215 (424)
Q Consensus 137 ~~~~latg~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~d-g~i~iwd~~~~~~~~ 215 (424)
+..++++++.++.|++|++... +..... ....|...+.+++|+|++. +|++++.+ +.|.+|++.... .
T Consensus 4 ~~~l~~~~~~~~~v~~~~~~~~-------~~~~~~-~~~~~~~~~~~~~~spdg~-~l~~~~~~~~~v~~~~~~~~~--~ 72 (343)
T 1ri6_A 4 KQTVYIASPESQQIHVWNLNHE-------GALTLT-QVVDVPGQVQPMVVSPDKR-YLYVGVRPEFRVLAYRIAPDD--G 72 (343)
T ss_dssp EEEEEEEEGGGTEEEEEEECTT-------SCEEEE-EEEECSSCCCCEEECTTSS-EEEEEETTTTEEEEEEECTTT--C
T ss_pred eEEEEEeCCCCCeEEEEEECCC-------CcEEEe-eeEecCCCCceEEECCCCC-EEEEeecCCCeEEEEEecCCC--C
Confidence 3446666688999999999641 111222 2345777899999999988 57777765 999999997221 1
Q ss_pred cccceeeeecCCccEeeEEEecCCCcEEEEEeCCCeEEEEEcCCCCCCCCeeeeeccCCCeeEEEecCCCCeEEEEEeCC
Q 014454 216 SLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATGSTD 295 (424)
Q Consensus 216 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~l~tg~~d 295 (424)
....+..+..+. .+..++|+|+++.+++++..++.|.+||+..+.....+..+. ....+.+++|+|+++++++++..+
T Consensus 73 ~~~~~~~~~~~~-~~~~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~-~~~~~~~~~~s~dg~~l~~~~~~~ 150 (343)
T 1ri6_A 73 ALTFAAESALPG-SLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVE-GLDGCHSANISPDNRTLWVPALKQ 150 (343)
T ss_dssp CEEEEEEEECSS-CCSEEEECTTSSEEEEEETTTTEEEEEEEETTEEEEEEEEEC-CCTTBCCCEECTTSSEEEEEEGGG
T ss_pred ceeeccccccCC-CCcEEEEcCCCCEEEEEecCCCeEEEEECCCCcccccccccc-CCCCceEEEECCCCCEEEEecCCC
Confidence 122333344333 789999999998787676679999999995322111233333 345689999999998655555489
Q ss_pred CcEEEEECCCCCCcce----EecC-CCCCEEEEEEcCCCCcEEEEEECCCeEEEeeCCCCCcccCCCCcCCCCCeeeEEE
Q 014454 296 KTVKLFDLRKISTALH----TFDS-HKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPEDAEDGPPELLFIH 370 (424)
Q Consensus 296 g~i~iwd~~~~~~~~~----~~~~-h~~~v~~~~~sp~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 370 (424)
+.|.+||+...+.... .+.. ....+..++|+|+++.+++++..++.|.+|++..... ........
T Consensus 151 ~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~~~~~i~~~~~~~~~g----------~~~~~~~~ 220 (343)
T 1ri6_A 151 DRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHG----------NIECVQTL 220 (343)
T ss_dssp TEEEEEEECTTSCEEEEEEEEEECSTTCCEEEEEECTTSSEEEEEETTTTEEEEEESSCTTS----------CCEEEEEE
T ss_pred CEEEEEEecCCCceeeecccccccCCCCCcceEEECCCCCEEEEEeCCCCEEEEEEecCCCC----------cEEEEeec
Confidence 9999999986333221 2222 3457889999999976666666899999999964211 01111111
Q ss_pred c----CC--CCCcceEEeCCCCCcEEEEEeCCCcEEEEecC
Q 014454 371 G----GH--TSKISDFSWNPCEDWVISSVAEDNILQIWQMA 405 (424)
Q Consensus 371 ~----~h--~~~v~~~~~~~~~~~~l~s~~~dg~i~vw~~~ 405 (424)
. ++ ...+..++|+|++++++++...++.|.+|++.
T Consensus 221 ~~~~~~~~~~~~~~~i~~s~dg~~l~v~~~~~~~i~v~d~~ 261 (343)
T 1ri6_A 221 DMMPENFSDTRWAADIHITPDGRHLYACDRTASLITVFSVS 261 (343)
T ss_dssp ECSCTTCCSCCCEEEEEECTTSSEEEEEETTTTEEEEEEEC
T ss_pred cccCccccccCCccceEECCCCCEEEEEecCCCEEEEEEEc
Confidence 1 11 23466899999999777777789999999998
No 142
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.89 E-value=1e-19 Score=166.96 Aligned_cols=238 Identities=13% Similarity=0.093 Sum_probs=173.6
Q ss_pred EEEeccCCceeEEEecCCCCcEEEEEeCCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCC---------ceeEEEecCC
Q 014454 119 IQQINHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHST---------EGYGLSWSKF 189 (424)
Q Consensus 119 ~~~~~h~~~v~~~~~~p~~~~~latg~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~h~~---------~v~~l~~~~~ 189 (424)
...+.....+..++|+|+++.+++++..++.|.+||..+ ......+..+.. .+.+++|+|+
T Consensus 82 ~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~d 151 (353)
T 3vgz_A 82 TQAIHNDLKPFGATINNTTQTLWFGNTVNSAVTAIDAKT----------GEVKGRLVLDDRKRTEEVRPLQPRELVADDA 151 (353)
T ss_dssp EEEEEESSCCCSEEEETTTTEEEEEETTTTEEEEEETTT----------CCEEEEEESCCCCCCSSCCCCEEEEEEEETT
T ss_pred EEEEecCCCcceEEECCCCCEEEEEecCCCEEEEEeCCC----------CeeEEEEecCCCccccccCCCCCceEEECCC
Confidence 344555667889999999987777777789999999987 333444544332 2688999999
Q ss_pred CCceEEEEe--CCCcEEEEeCCCCCCCCcccceeeeecCCccEeeEEEecCCCcEEEEEeCCCeEEEEEcCCCCCCCCee
Q 014454 190 KEGHLLSGS--DDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQ 267 (424)
Q Consensus 190 ~~~~l~s~~--~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~dg~i~i~d~~~~~~~~~~~ 267 (424)
+.. +++++ .++.|.+||+.+++ ....+..+...+.+++|+|+++.++ +++.++.|.+||+.+++. +.
T Consensus 152 g~~-l~~~~~~~~~~i~~~d~~~~~------~~~~~~~~~~~~~~~~~s~dg~~l~-~~~~~~~i~~~d~~~~~~---~~ 220 (353)
T 3vgz_A 152 TNT-VYISGIGKESVIWVVDGGNIK------LKTAIQNTGKMSTGLALDSEGKRLY-TTNADGELITIDTADNKI---LS 220 (353)
T ss_dssp TTE-EEEEEESSSCEEEEEETTTTE------EEEEECCCCTTCCCCEEETTTTEEE-EECTTSEEEEEETTTTEE---EE
T ss_pred CCE-EEEEecCCCceEEEEcCCCCc------eEEEecCCCCccceEEECCCCCEEE-EEcCCCeEEEEECCCCeE---EE
Confidence 884 55544 58899999997653 2333443555688999999998665 667799999999988653 33
Q ss_pred eeec----cCCCeeEEEecCCCCeEEEEEeCCCcEEEEECCCCCCcceEecCCCCCEEEEEEcCCCCcEEEEEECCCeEE
Q 014454 268 SVVA----HQSEVNCLAFNPFNEWILATGSTDKTVKLFDLRKISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLM 343 (424)
Q Consensus 268 ~~~~----~~~~v~~v~~~~~~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~l~s~~~dg~i~ 343 (424)
.+.. +...+..++|+|+++.++++...++.|.+||+.+ ++.+..+.... ...++|+|+++.++++...++.|.
T Consensus 221 ~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~-~~~~~~~~~~~--~~~~~~s~dg~~l~v~~~~~~~v~ 297 (353)
T 3vgz_A 221 RKKLLDDGKEHFFINISLDTARQRAFITDSKAAEVLVVDTRN-GNILAKVAAPE--SLAVLFNPARNEAYVTHRQAGKVS 297 (353)
T ss_dssp EEECCCSSSCCCEEEEEEETTTTEEEEEESSSSEEEEEETTT-CCEEEEEECSS--CCCEEEETTTTEEEEEETTTTEEE
T ss_pred EEEcCCCCCCcccceEEECCCCCEEEEEeCCCCEEEEEECCC-CcEEEEEEcCC--CceEEECCCCCEEEEEECCCCeEE
Confidence 3332 4556888999999997666666679999999987 56666666433 267999999976666666799999
Q ss_pred EeeCCCCCcccCCCCcCCCCCeeeEEEcCCCCCcceEEeCCCCCcEEEEEeC
Q 014454 344 VWDLSRIDEEQTPEDAEDGPPELLFIHGGHTSKISDFSWNPCEDWVISSVAE 395 (424)
Q Consensus 344 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~ 395 (424)
+||+.++ +.+..+... ..+.+++|+|++++++++...
T Consensus 298 ~~d~~~~--------------~~~~~~~~~-~~~~~~~~s~dg~~l~v~~~~ 334 (353)
T 3vgz_A 298 VIDAKSY--------------KVVKTFDTP-THPNSLALSADGKTLYVSVKQ 334 (353)
T ss_dssp EEETTTT--------------EEEEEEECC-SEEEEEEECTTSCEEEEEEEC
T ss_pred EEECCCC--------------eEEEEEecC-CCCCeEEEcCCCCEEEEEEcc
Confidence 9999875 334444333 357899999999965555543
No 143
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.87 E-value=2.7e-20 Score=188.25 Aligned_cols=242 Identities=7% Similarity=-0.025 Sum_probs=171.7
Q ss_pred CceeEEEecCCCCcEEEEEeCCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCceeEEEecCCCCceEEEEeCCCcEEE
Q 014454 126 GEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDDAQICL 205 (424)
Q Consensus 126 ~~v~~~~~~p~~~~~latg~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~i 205 (424)
..|.+++|+|+++ .|++++. +.|++||+.... ......+..|...+.+++|+|+|+ +|+.++ ++.|++
T Consensus 109 ~~v~~~~~SpDg~-~l~~~~~-~~i~~~d~~~~~--------~~~~~~l~~~~~~~~~~~~SPDG~-~la~~~-~~~i~~ 176 (741)
T 2ecf_A 109 TGIVDYQWSPDAQ-RLLFPLG-GELYLYDLKQEG--------KAAVRQLTHGEGFATDAKLSPKGG-FVSFIR-GRNLWV 176 (741)
T ss_dssp EESCCCEECTTSS-EEEEEET-TEEEEEESSSCS--------TTSCCBCCCSSSCEEEEEECTTSS-EEEEEE-TTEEEE
T ss_pred cCcceeEECCCCC-EEEEEeC-CcEEEEECCCCC--------cceEEEcccCCcccccccCCCCCC-EEEEEe-CCcEEE
Confidence 4588999999997 5666665 999999998710 002334566778899999999998 677776 469999
Q ss_pred EeCCCCCCCCcccceeeeecCCc----------------cEeeEEEecCCCcEEEEEeCCC-------------------
Q 014454 206 WDINAAPKNKSLEAMQIFKVHEG----------------VVEDVAWHLRHEYLFGSVGDDQ------------------- 250 (424)
Q Consensus 206 wd~~~~~~~~~~~~~~~~~~~~~----------------~v~~~~~~~~~~~~~~s~~~dg------------------- 250 (424)
||+.++.. ......+.. .+..++|+|+++.++ +++.|+
T Consensus 177 ~d~~~g~~------~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~-~~~~d~~~~~~~~~~~~~p~~~~~~ 249 (741)
T 2ecf_A 177 IDLASGRQ------MQLTADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIA-YARIDESPVPVQKRYEVYADRTDVI 249 (741)
T ss_dssp EETTTTEE------EECCCCCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEE-EEEEECTTSCEEEEEEECSSCEEEE
T ss_pred EecCCCCE------EEeccCCccceeccccceeeeeccccccceEECCCCCEEE-EEEEcCCCCceEecCCCCCCcccce
Confidence 99986522 111111222 247899999998765 555444
Q ss_pred --------------eEEEEEcCC-CCCCCCeeee--eccCCCeeEEEecCCCCeEEEEEe----CCCcEEEEECCCCCCc
Q 014454 251 --------------YLLIWDLRT-PSVSKPVQSV--VAHQSEVNCLAFNPFNEWILATGS----TDKTVKLFDLRKISTA 309 (424)
Q Consensus 251 --------------~i~i~d~~~-~~~~~~~~~~--~~~~~~v~~v~~~~~~~~~l~tg~----~dg~i~iwd~~~~~~~ 309 (424)
.|.+||+.+ ++. .... ..|...+.+++| |+|+.+++++. .+..|++||+.+ +..
T Consensus 250 ~~~~~~~g~~~~~~~l~~~d~~~~~~~---~~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~-g~~ 324 (741)
T 2ecf_A 250 EQRYPAAGDANVQVKLGVISPAEQAQT---QWIDLGKEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLAS-NQQ 324 (741)
T ss_dssp EEECCBTTSCCCEEEEEEECSSTTCCC---EEECCCSCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTT-CCE
T ss_pred EeecCCCCCCCCeeEEEEEECCCCCce---EEecCCCCcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCC-Cce
Confidence 788999987 653 2221 146778999999 99996444433 256899999987 555
Q ss_pred ceEecCCCC----CEEEEEEcCCCCcEEEEEECCCeEEEeeCCCCCcccCCCCcCCCCCeeeEEEcCCCCCcceE-EeCC
Q 014454 310 LHTFDSHKE----EVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPEDAEDGPPELLFIHGGHTSKISDF-SWNP 384 (424)
Q Consensus 310 ~~~~~~h~~----~v~~~~~sp~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~-~~~~ 384 (424)
...+..+.. .+..++|+|+++ ++++++.||.++||.+.... . ...+..|...|..+ .|+|
T Consensus 325 ~~~~~~~~~~~~~~~~~~~~spdg~-~~~~~~~~g~~~l~~~~~~~-------------~-~~~l~~~~~~v~~~~~~s~ 389 (741)
T 2ecf_A 325 RVLAHETSPTWVPLHNSLRFLDDGS-ILWSSERTGFQHLYRIDSKG-------------K-AAALTHGNWSVDELLAVDE 389 (741)
T ss_dssp EEEEEEECSSCCCCCSCCEECTTSC-EEEEECTTSSCEEEEECSSS-------------C-EEESCCSSSCEEEEEEEET
T ss_pred EEEEEcCCCCcCCcCCceEECCCCe-EEEEecCCCccEEEEEcCCC-------------C-eeeeeecceEEEeEeEEeC
Confidence 555544433 456899999997 88899999988888775321 2 44556667778787 5999
Q ss_pred CCCcEEEEEeCCC--cEEEEecCC
Q 014454 385 CEDWVISSVAEDN--ILQIWQMAE 406 (424)
Q Consensus 385 ~~~~~l~s~~~dg--~i~vw~~~~ 406 (424)
+++.++++++.++ .++||++..
T Consensus 390 dg~~l~~~~~~~~~~~~~l~~~~~ 413 (741)
T 2ecf_A 390 KAGLAYFRAGIESARESQIYAVPL 413 (741)
T ss_dssp TTTEEEEEECSSCTTCBEEEEEET
T ss_pred CCCEEEEEEeCCCCceEEEEEEEc
Confidence 9996667777676 899999864
No 144
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.87 E-value=2e-19 Score=166.16 Aligned_cols=294 Identities=12% Similarity=0.145 Sum_probs=182.8
Q ss_pred eEEEEEeecCCCCCCCeEEEEEEECCCCCCCcccCCCCCcCCCCCCCCCCCCcEEEEEEe--ccCCceeEEEecCCCCcE
Q 014454 63 VQKMILGTHTSENEPNYLMLAQVQLPLDDSENDARHYDDDRSDFGGFGCANGKVQIIQQI--NHDGEVNRARYMPQNPFL 140 (424)
Q Consensus 63 ~~~~~~gt~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~h~~~v~~~~~~p~~~~~ 140 (424)
.+++++|+++.+ ..|++..++. ..+++..+... .....+..++|+|+++ +
T Consensus 2 ~~~~~vg~~~~~---~~i~~~~~d~------------------------~~g~l~~~~~~~~~~~~~~~~~a~spdg~-~ 53 (365)
T 1jof_A 2 LHHLMIGTWTPP---GAIFTVQFDD------------------------EKLTCKLIKRTEIPQDEPISWMTFDHERK-N 53 (365)
T ss_dssp EEEEEEEESSSS---CEEEEEEEET------------------------TTTEEEEEEEEECCTTCCCSEEEECTTSS-E
T ss_pred cEEEEEEEccCC---CcEEEEEEEC------------------------CCCCEEEeeEEccCCCCCCcEEEECCCCC-E
Confidence 367889998753 3566666631 12344444433 3445788999999997 5
Q ss_pred EEEEeCCCeEEEEeCC-CCCCCCCCCCCCCCcEEEecCCCceeEEEecCCCCc-eEEEEe-------------CCCcEEE
Q 014454 141 IATKTVSAEVYVFDYS-KHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEG-HLLSGS-------------DDAQICL 205 (424)
Q Consensus 141 latg~~dg~v~iw~~~-~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~-~l~s~~-------------~dg~i~i 205 (424)
|++++.+ .|.+|++. . +..........+ +.+.+++|+|++.. ++++++ .+|.+.+
T Consensus 54 l~~~~~~-~v~~~~~~~~--------g~~~~~~~~~~~-g~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~g~v~v 123 (365)
T 1jof_A 54 IYGAAMK-KWSSFAVKSP--------TEIVHEASHPIG-GHPRANDADTNTRAIFLLAAKQPPYAVYANPFYKFAGYGNV 123 (365)
T ss_dssp EEEEEBT-EEEEEEEEET--------TEEEEEEEEECC-SSGGGGCTTSCCEEEEEEECSSTTCCEEEEEESSSCCEEEE
T ss_pred EEEEccc-eEEEEEECCC--------CCEEEeeEeecC-CCCccEEECCCCCEEEEEEecCCcceeccceeecCCceEEE
Confidence 6666766 99999986 3 111111111111 23667999999874 244553 6899999
Q ss_pred EeCCCCCCCCcccceeeee-cCCccEeeEEEecCCCcEEEEEeCCCeEEEEEcC-CCCCCCCeeeee--ccCCCeeEEEe
Q 014454 206 WDINAAPKNKSLEAMQIFK-VHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLR-TPSVSKPVQSVV--AHQSEVNCLAF 281 (424)
Q Consensus 206 wd~~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~~s~~~dg~i~i~d~~-~~~~~~~~~~~~--~~~~~v~~v~~ 281 (424)
|++...... ...+..+. .+...+.+++|+|+++.++++...++.|++||+. +++. ..+..+. .+...+..++|
T Consensus 124 ~~~~~~g~~--~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~v~~~~~~~~g~~-~~~~~~~~~~~g~~p~~~~~ 200 (365)
T 1jof_A 124 FSVSETGKL--EKNVQNYEYQENTGIHGMVFDPTETYLYSADLTANKLWTHRKLASGEV-ELVGSVDAPDPGDHPRWVAM 200 (365)
T ss_dssp EEECTTCCE--EEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCE-EEEEEEECSSTTCCEEEEEE
T ss_pred EccCCCCcC--cceEeeEEeCCCCcceEEEECCCCCEEEEEcCCCCEEEEEEECCCCCE-EEeeeEecCCCCCCCCEeEE
Confidence 999743211 11111111 2456799999999998776555457899999998 5442 1222232 23567899999
Q ss_pred cCCCCeEEEEEeCCCcEEEEECCCC-CCcc---eEe---c----CCCC------CEEEEE-EcCCCCcEEEEEECCC---
Q 014454 282 NPFNEWILATGSTDKTVKLFDLRKI-STAL---HTF---D----SHKE------EVFQVG-WNPKNETILASCCLGR--- 340 (424)
Q Consensus 282 ~~~~~~~l~tg~~dg~i~iwd~~~~-~~~~---~~~---~----~h~~------~v~~~~-~sp~~~~~l~s~~~dg--- 340 (424)
+|+|++++++...++.|.+|++... ++.. ..+ . +|.. .+..++ |+|+|+.++++...++
T Consensus 201 spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~~~~~~~~ 280 (365)
T 1jof_A 201 HPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFASSRANKFEL 280 (365)
T ss_dssp CTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEESSTTS
T ss_pred CCCCCEEEEEECCCCeEEEEEEeCCCCcEEEccceEEcCCCCcCCcccccccccccccEEEECCCCCEEEEECCCCCCCC
Confidence 9999865444445789999987531 3321 112 1 1122 588999 9999975444433333
Q ss_pred --eEEEeeCCCCCcccCCCCcCCCCCeeeE-EEcCCCCCcceEEeCC---CCCcEEEEEeC-CCcEEEEecCCccC
Q 014454 341 --RLMVWDLSRIDEEQTPEDAEDGPPELLF-IHGGHTSKISDFSWNP---CEDWVISSVAE-DNILQIWQMAENIY 409 (424)
Q Consensus 341 --~i~iwd~~~~~~~~~~~~~~~~~~~~~~-~~~~h~~~v~~~~~~~---~~~~~l~s~~~-dg~i~vw~~~~~~~ 409 (424)
.|.+|++..... ...+. ....+...+..++|+| ++++ |++++. ++.|++|++....+
T Consensus 281 ~~~i~v~~~~~~g~-----------~~~~~~~~~~~~~~~~~~a~sp~~~dg~~-l~v~~~~~~~v~v~~~~~~~l 344 (365)
T 1jof_A 281 QGYIAGFKLRDCGS-----------IEKQLFLSPTPTSGGHSNAVSPCPWSDEW-MAITDDQEGWLEIYRWKDEFL 344 (365)
T ss_dssp CCEEEEEEECTTSC-----------EEEEEEEEECSSCCTTCCCEEECTTCTTE-EEEECSSSCEEEEEEEETTEE
T ss_pred CCeEEEEEECCCCC-----------EEEeeeeeecCCCCcccceecCCCcCCCE-EEEEEcCCCeEEEEEEchhhC
Confidence 899999863111 01111 2333455678899999 7995 555554 58999999976643
No 145
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.87 E-value=4.7e-20 Score=168.00 Aligned_cols=246 Identities=13% Similarity=0.029 Sum_probs=171.1
Q ss_pred EEeccCC---ceeEEEecCCCCcEEEEEeCCCeEEEEeCCCCCCCCCCCCCCCCcEEEec-C----CCceeEEEecCCCC
Q 014454 120 QQINHDG---EVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRG-H----STEGYGLSWSKFKE 191 (424)
Q Consensus 120 ~~~~h~~---~v~~~~~~p~~~~~latg~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~-h----~~~v~~l~~~~~~~ 191 (424)
..+.+.. .+..++|+|+++.+++++..++.|.+||+.+ ......+.. + ...+.+++|+|++.
T Consensus 25 ~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~----------~~~~~~~~~~~~~~~~~~~~~~~~s~dg~ 94 (337)
T 1pby_B 25 KVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVT----------GETLGRIDLSTPEERVKSLFGAALSPDGK 94 (337)
T ss_dssp EEEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTT----------CCEEEEEECCBTTEEEECTTCEEECTTSS
T ss_pred EEEEcCCCCCCccceEEcCCCCEEEEEeCCCCeEEEEECCC----------CCeEeeEEcCCcccccccccceEECCCCC
Confidence 3444444 5889999999987778888889999999976 233333332 1 12577899999988
Q ss_pred ceEEEEe------------CCCcEEEEeCCCCCCCCcccceeeeecCCccEeeEEEecCCCcEEEEEeCCCeEEEEEcCC
Q 014454 192 GHLLSGS------------DDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRT 259 (424)
Q Consensus 192 ~~l~s~~------------~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~dg~i~i~d~~~ 259 (424)
+|++++ .++.|.+||+.+++ ....+. ....+.+++|+|+++.++++ ++.|.+||+.+
T Consensus 95 -~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~------~~~~~~-~~~~~~~~~~s~dg~~l~~~---~~~i~~~d~~~ 163 (337)
T 1pby_B 95 -TLAIYESPVRLELTHFEVQPTRVALYDAETLS------RRKAFE-APRQITMLAWARDGSKLYGL---GRDLHVMDPEA 163 (337)
T ss_dssp -EEEEEEEEEEECSSCEEECCCEEEEEETTTTE------EEEEEE-CCSSCCCEEECTTSSCEEEE---SSSEEEEETTT
T ss_pred -EEEEEecccccccccccccCceEEEEECCCCc------EEEEEe-CCCCcceeEECCCCCEEEEe---CCeEEEEECCC
Confidence 577665 57999999997652 223333 24567889999999877644 68999999988
Q ss_pred CCCCCCeeeeeccCCCeeEEEecCCCCeEEEEEeCCC-----------------------cEEEEECCCCCCcceEecCC
Q 014454 260 PSVSKPVQSVVAHQSEVNCLAFNPFNEWILATGSTDK-----------------------TVKLFDLRKISTALHTFDSH 316 (424)
Q Consensus 260 ~~~~~~~~~~~~~~~~v~~v~~~~~~~~~l~tg~~dg-----------------------~i~iwd~~~~~~~~~~~~~h 316 (424)
++. +..+..+. ....+.|+|++..+++++..++ .|.+||+.+.......+..+
T Consensus 164 ~~~---~~~~~~~~-~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~ 239 (337)
T 1pby_B 164 GTL---VEDKPIQS-WEAETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMREVRIM 239 (337)
T ss_dssp TEE---EEEECSTT-TTTTTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEEEEEEEEC
T ss_pred CcE---eeeeeccc-cCCCceeCCCccEEeeeccCCCceeeeeeccccccccccccccccceEEEeCCCCCceEeecCCC
Confidence 653 33333322 1123378998886554443333 46899998743223344556
Q ss_pred CCCEEEEEEcCCCCcEEEEEECCCeEEEeeCCCCCcccCCCCcCCCCCeeeEEEcCCCCCcceEEeCCCCCcEEEEEeCC
Q 014454 317 KEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPEDAEDGPPELLFIHGGHTSKISDFSWNPCEDWVISSVAED 396 (424)
Q Consensus 317 ~~~v~~~~~sp~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d 396 (424)
...+.+++|+|+++ +++++ ++.|.+||+.++ +.+..+..+ ..+.+++|+|++++ |++++.+
T Consensus 240 ~~~~~~~~~s~dg~-~l~~~--~~~v~~~d~~~~--------------~~~~~~~~~-~~~~~~~~s~dg~~-l~~~~~~ 300 (337)
T 1pby_B 240 DVFYFSTAVNPAKT-RAFGA--YNVLESFDLEKN--------------ASIKRVPLP-HSYYSVNVSTDGST-VWLGGAL 300 (337)
T ss_dssp SSCEEEEEECTTSS-EEEEE--ESEEEEEETTTT--------------EEEEEEECS-SCCCEEEECTTSCE-EEEESBS
T ss_pred CCceeeEEECCCCC-EEEEe--CCeEEEEECCCC--------------cCcceecCC-CceeeEEECCCCCE-EEEEcCC
Confidence 67889999999997 45555 789999999764 333333322 35789999999994 5566889
Q ss_pred CcEEEEecCCccC
Q 014454 397 NILQIWQMAENIY 409 (424)
Q Consensus 397 g~i~vw~~~~~~~ 409 (424)
+.|++||+.++..
T Consensus 301 ~~i~v~d~~~~~~ 313 (337)
T 1pby_B 301 GDLAAYDAETLEK 313 (337)
T ss_dssp SEEEEEETTTCCE
T ss_pred CcEEEEECcCCcE
Confidence 9999999987743
No 146
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.87 E-value=2.6e-20 Score=188.46 Aligned_cols=241 Identities=11% Similarity=0.155 Sum_probs=167.1
Q ss_pred CCceeEEEecCCCCcEEEEEeC-CC-----eEEEEeCCCCCCCCCCCCCCCCcEEEecCC--------------------
Q 014454 125 DGEVNRARYMPQNPFLIATKTV-SA-----EVYVFDYSKHPSKPPLDGACSPDLRLRGHS-------------------- 178 (424)
Q Consensus 125 ~~~v~~~~~~p~~~~~latg~~-dg-----~v~iw~~~~~~~~~~~~~~~~~~~~~~~h~-------------------- 178 (424)
...|..++|+|+|+ .||+++. ++ .|++||+.+ ......+..+.
T Consensus 36 ~~~~~~~~~SpdG~-~la~~~~~d~~~~~~~i~~~d~~~----------g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 104 (741)
T 2ecf_A 36 GPTLMKPKVAPDGS-RVTFLRGKDSDRNQLDLWSYDIGS----------GQTRLLVDSKVVLPGTETLSDEEKARRERQR 104 (741)
T ss_dssp CCCCEEEEECTTSS-EEEEEECCSSCTTEEEEEEEETTT----------CCEEEEECGGGTC------------------
T ss_pred CCCCCCceEecCCC-EEEEEeccCCCCcccEEEEEECCC----------CceeEccchhhcccccccccchhhhhhhhhh
Confidence 45688999999997 6777777 88 999999987 22222333222
Q ss_pred ----CceeEEEecCCCCceEEEEeCCCcEEEEeCCCCCCCCcccceeeeecCCccEeeEEEecCCCcEEEEEeCCCeEEE
Q 014454 179 ----TEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLI 254 (424)
Q Consensus 179 ----~~v~~l~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~dg~i~i 254 (424)
..+.+++|+|+++ +|++++. +.|.+||+.++... ....+..|...+..++|+|+++.+ +.++ ++.|++
T Consensus 105 ~~~~~~v~~~~~SpDg~-~l~~~~~-~~i~~~d~~~~~~~----~~~~l~~~~~~~~~~~~SPDG~~l-a~~~-~~~i~~ 176 (741)
T 2ecf_A 105 IAAMTGIVDYQWSPDAQ-RLLFPLG-GELYLYDLKQEGKA----AVRQLTHGEGFATDAKLSPKGGFV-SFIR-GRNLWV 176 (741)
T ss_dssp --CCEESCCCEECTTSS-EEEEEET-TEEEEEESSSCSTT----SCCBCCCSSSCEEEEEECTTSSEE-EEEE-TTEEEE
T ss_pred hccccCcceeEECCCCC-EEEEEeC-CcEEEEECCCCCcc----eEEEcccCCcccccccCCCCCCEE-EEEe-CCcEEE
Confidence 2378999999998 6777776 99999999876200 112244567889999999999855 4555 569999
Q ss_pred EEcCCCCCCCCeeeeeccCC----------------CeeEEEecCCCCeEEEEEeCCC----------------------
Q 014454 255 WDLRTPSVSKPVQSVVAHQS----------------EVNCLAFNPFNEWILATGSTDK---------------------- 296 (424)
Q Consensus 255 ~d~~~~~~~~~~~~~~~~~~----------------~v~~v~~~~~~~~~l~tg~~dg---------------------- 296 (424)
||+.++.. ......+.. .+.+++|+|+|+. |++++.|+
T Consensus 177 ~d~~~g~~---~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~-l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~ 252 (741)
T 2ecf_A 177 IDLASGRQ---MQLTADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSA-IAYARIDESPVPVQKRYEVYADRTDVIEQR 252 (741)
T ss_dssp EETTTTEE---EECCCCCCSSEEESCCCHHHHHHSCCCCSEEECTTSSC-EEEEEEECTTSCEEEEEEECSSCEEEEEEE
T ss_pred EecCCCCE---EEeccCCccceeccccceeeeeccccccceEECCCCCE-EEEEEEcCCCCceEecCCCCCCcccceEee
Confidence 99987542 221122222 1478999999996 66665554
Q ss_pred -----------cEEEEECCC-CCCcceEec--CCCCCEEEEEEcCCCCcEEEEEE----CCCeEEEeeCCCCCcccCCCC
Q 014454 297 -----------TVKLFDLRK-ISTALHTFD--SHKEEVFQVGWNPKNETILASCC----LGRRLMVWDLSRIDEEQTPED 358 (424)
Q Consensus 297 -----------~i~iwd~~~-~~~~~~~~~--~h~~~v~~~~~sp~~~~~l~s~~----~dg~i~iwd~~~~~~~~~~~~ 358 (424)
.|.+||+.+ .. ...... .|...+..++| |+|+.+++++. .+..|++||+.++..
T Consensus 253 ~~~~g~~~~~~~l~~~d~~~~~~-~~~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g~~------ 324 (741)
T 2ecf_A 253 YPAAGDANVQVKLGVISPAEQAQ-TQWIDLGKEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASNQQ------ 324 (741)
T ss_dssp CCBTTSCCCEEEEEEECSSTTCC-CEEECCCSCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTCCE------
T ss_pred cCCCCCCCCeeEEEEEECCCCCc-eEEecCCCCcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCCce------
Confidence 788899875 33 222222 46788999999 99975444433 256799999987532
Q ss_pred cCCCCCeeeEEEcCCCC----CcceEEeCCCCCcEEEEEeCCCcEEEEecC
Q 014454 359 AEDGPPELLFIHGGHTS----KISDFSWNPCEDWVISSVAEDNILQIWQMA 405 (424)
Q Consensus 359 ~~~~~~~~~~~~~~h~~----~v~~~~~~~~~~~~l~s~~~dg~i~vw~~~ 405 (424)
......+.. .+..++|+|+++ ++++++.||.++||.+.
T Consensus 325 --------~~~~~~~~~~~~~~~~~~~~spdg~-~~~~~~~~g~~~l~~~~ 366 (741)
T 2ecf_A 325 --------RVLAHETSPTWVPLHNSLRFLDDGS-ILWSSERTGFQHLYRID 366 (741)
T ss_dssp --------EEEEEEECSSCCCCCSCCEECTTSC-EEEEECTTSSCEEEEEC
T ss_pred --------EEEEEcCCCCcCCcCCceEECCCCe-EEEEecCCCccEEEEEc
Confidence 222222222 457899999999 78888999988888775
No 147
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.86 E-value=3.9e-20 Score=181.87 Aligned_cols=233 Identities=10% Similarity=0.051 Sum_probs=169.1
Q ss_pred CCceeEEEecCCCCcEEEEEeC-CCeEEEEeCCCCCCCCCCCCCCCCcEEEecCC-CceeEEEecCCCCceEEEEeC---
Q 014454 125 DGEVNRARYMPQNPFLIATKTV-SAEVYVFDYSKHPSKPPLDGACSPDLRLRGHS-TEGYGLSWSKFKEGHLLSGSD--- 199 (424)
Q Consensus 125 ~~~v~~~~~~p~~~~~latg~~-dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~h~-~~v~~l~~~~~~~~~l~s~~~--- 199 (424)
..+|++++|+|+|+ .||+++. +|+++||++.. .....+..|. ..+.+++|+|+ . ++++++.
T Consensus 21 ~~~~~~~~~~~DG~-~la~~s~~~g~~~lw~~~~-----------g~~~~lt~~~~~~~~~~~~spd-~-~l~~~~~~~g 86 (582)
T 3o4h_A 21 AVEKYSLQGVVDGD-KLLVVGFSEGSVNAYLYDG-----------GETVKLNREPINSVLDPHYGVG-R-VILVRDVSKG 86 (582)
T ss_dssp HSCEEEEEEEETTT-EEEEEEEETTEEEEEEEET-----------TEEEECCSSCCSEECEECTTCS-E-EEEEEECSTT
T ss_pred ccchheeecCCCCC-eEEEEEccCCceeEEEEcC-----------CCcEeeecccccccccccCCCC-e-EEEEeccCCC
Confidence 45799999999998 5666665 99999999854 2234455565 58999999997 4 7777765
Q ss_pred CCcEEEEeCCC--CCCCCcccceeeeecCCccEeeEEEecCCCcEEEEEeCCCeEEEEEcCCCCCCCCeeeeeccCCCee
Q 014454 200 DAQICLWDINA--APKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVN 277 (424)
Q Consensus 200 dg~i~iwd~~~--~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~ 277 (424)
+....+|.+.. ..... .+. ....+...+|+|+++.++++.+.++.+.+||+.+++. ..+..+.. .
T Consensus 87 ~~~~~l~~~~~~~~g~~~------~l~-~~~~~~~~~~s~dg~~~~~~s~~~~~~~l~d~~~g~~----~~l~~~~~--~ 153 (582)
T 3o4h_A 87 AEQHALFKVNTSRPGEEQ------RLE-AVKPMRILSGVDTGEAVVFTGATEDRVALYALDGGGL----RELARLPG--F 153 (582)
T ss_dssp SCCEEEEEEETTSTTCCE------ECT-TSCSBEEEEEEECSSCEEEEEECSSCEEEEEEETTEE----EEEEEESS--C
T ss_pred CcceEEEEEeccCCCccc------ccc-CCCCceeeeeCCCCCeEEEEecCCCCceEEEccCCcE----EEeecCCC--c
Confidence 45566766544 22111 111 1223446688898876555555555666999987652 23333333 8
Q ss_pred EEEecCCCCeEEEEEeCC----CcEEEEECCCCCCcceEecCCCCCEEEEEEcCCCCcEEEEEECCC--eEEEeeCCCCC
Q 014454 278 CLAFNPFNEWILATGSTD----KTVKLFDLRKISTALHTFDSHKEEVFQVGWNPKNETILASCCLGR--RLMVWDLSRID 351 (424)
Q Consensus 278 ~v~~~~~~~~~l~tg~~d----g~i~iwd~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~l~s~~~dg--~i~iwd~~~~~ 351 (424)
+++|+|+|+. |++++.+ +.|++||+.+ ++ ...+..|...+..++|||+|+ .|+++..++ .|++||+..+.
T Consensus 154 ~~~~spDG~~-la~~~~~~~~~~~i~~~d~~~-g~-~~~l~~~~~~~~~~~~SpDG~-~l~~~~~~~~~~i~~~d~~~~~ 229 (582)
T 3o4h_A 154 GFVSDIRGDL-IAGLGFFGGGRVSLFTSNLSS-GG-LRVFDSGEGSFSSASISPGMK-VTAGLETAREARLVTVDPRDGS 229 (582)
T ss_dssp EEEEEEETTE-EEEEEEEETTEEEEEEEETTT-CC-CEEECCSSCEEEEEEECTTSC-EEEEEECSSCEEEEEECTTTCC
T ss_pred eEEECCCCCE-EEEEEEcCCCCeEEEEEcCCC-CC-ceEeecCCCccccceECCCCC-EEEEccCCCeeEEEEEcCCCCc
Confidence 9999999994 7766665 6899999986 33 446778888999999999997 577888888 89999998642
Q ss_pred cccCCCCcCCCCCeeeEEEcCCCCCcceEE--------eCCCCCcEEEEEeCCCcEEEEec
Q 014454 352 EEQTPEDAEDGPPELLFIHGGHTSKISDFS--------WNPCEDWVISSVAEDNILQIWQM 404 (424)
Q Consensus 352 ~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~--------~~~~~~~~l~s~~~dg~i~vw~~ 404 (424)
.. ...+|...+..++ |+|+|. ++++++.|+.+++|++
T Consensus 230 --------------~~-~~~~~~~~~~~~~~~~~~~~~~spdg~-~~~~~~~~g~~~l~~~ 274 (582)
T 3o4h_A 230 --------------VE-DLELPSKDFSSYRPTAITWLGYLPDGR-LAVVARREGRSAVFID 274 (582)
T ss_dssp --------------EE-ECCCSCSHHHHHCCSEEEEEEECTTSC-EEEEEEETTEEEEEET
T ss_pred --------------EE-EccCCCcChhhhhhccccceeEcCCCc-EEEEEEcCCcEEEEEE
Confidence 22 5566777777788 999995 8999999999999999
No 148
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.86 E-value=5.2e-20 Score=185.67 Aligned_cols=238 Identities=10% Similarity=0.066 Sum_probs=165.2
Q ss_pred ceeEEEecCCCCcEEEEEeCCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCC---ceeEEEecCCCCceEEEEeCC---
Q 014454 127 EVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHST---EGYGLSWSKFKEGHLLSGSDD--- 200 (424)
Q Consensus 127 ~v~~~~~~p~~~~~latg~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~h~~---~v~~l~~~~~~~~~l~s~~~d--- 200 (424)
.+.+++|+|++. ++++ +.||.|++||+.+ ......+..|.. .|.+++|+|+|+ +|++++.+
T Consensus 18 ~~~~~~~spdg~-~~~~-~~dg~i~~~d~~~----------g~~~~~~~~~~~~~~~v~~~~~SpDg~-~l~~~~~~~~~ 84 (723)
T 1xfd_A 18 HDPEAKWISDTE-FIYR-EQKGTVRLWNVET----------NTSTVLIEGKKIESLRAIRYEISPDRE-YALFSYNVEPI 84 (723)
T ss_dssp CCCCCCBSSSSC-BCCC-CSSSCEEEBCGGG----------CCCEEEECTTTTTTTTCSEEEECTTSS-EEEEEESCCCC
T ss_pred cccccEEcCCCc-EEEE-eCCCCEEEEECCC----------CcEEEEeccccccccccceEEECCCCC-EEEEEecCccc
Confidence 467799999997 6666 6899999999987 333455555654 489999999998 68887764
Q ss_pred ------CcEEEEeCCCCCCCCcccceeeeecCCccEeeEEEecCCCcEEEEEeCCCeEEEEEcCCCCCCCCeeeeeccCC
Q 014454 201 ------AQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQS 274 (424)
Q Consensus 201 ------g~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~ 274 (424)
+.|.+||+.++.. ..+.....|...+..++|+|+++.+ |.++. +.|++||+.++.. ......+..
T Consensus 85 ~~~~~~~~i~~~d~~~~~~----~~l~~~~~~~~~~~~~~~SPdG~~l-a~~~~-~~i~~~~~~~g~~---~~~~~~~~~ 155 (723)
T 1xfd_A 85 YQHSYTGYYVLSKIPHGDP----QSLDPPEVSNAKLQYAGWGPKGQQL-IFIFE-NNIYYCAHVGKQA---IRVVSTGKE 155 (723)
T ss_dssp SSSCCCSEEEEEESSSCCC----EECCCTTCCSCCCSBCCBCSSTTCE-EEEET-TEEEEESSSSSCC---EEEECCCBT
T ss_pred eeecceeeEEEEECCCCce----EeccCCccccccccccEECCCCCEE-EEEEC-CeEEEEECCCCce---EEEecCCCC
Confidence 7888999987643 1122223455568999999999865 45554 8999999988653 333333232
Q ss_pred C------------------eeEEEecCCCCeEEEEEeCCC----------------------------------cEEEEE
Q 014454 275 E------------------VNCLAFNPFNEWILATGSTDK----------------------------------TVKLFD 302 (424)
Q Consensus 275 ~------------------v~~v~~~~~~~~~l~tg~~dg----------------------------------~i~iwd 302 (424)
. +.+++|+|+|+. |++++.++ .|++||
T Consensus 156 ~~~~~g~~~~v~~ee~~~~~~~~~~SpDg~~-la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d 234 (723)
T 1xfd_A 156 GVIYNGLSDWLYEEEILKTHIAHWWSPDGTR-LAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIG 234 (723)
T ss_dssp TTEEEEECCHHHHHTTSSSSEEEEECTTSSE-EEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEE
T ss_pred CceECcccceeEEEEeccCcceEEECCCCCE-EEEEEECCCccceEEeeccCCcCCCcceeccCCCCCCCCCeeEEEEEE
Confidence 2 378999999995 66655432 799999
Q ss_pred CCCCCCcceEecCC------CCCEEEEEEcCCCCcEEEEEEC----CCeEEEeeCCCCCcccCCCCcCCCCCeeeEEEc-
Q 014454 303 LRKISTALHTFDSH------KEEVFQVGWNPKNETILASCCL----GRRLMVWDLSRIDEEQTPEDAEDGPPELLFIHG- 371 (424)
Q Consensus 303 ~~~~~~~~~~~~~h------~~~v~~~~~sp~~~~~l~s~~~----dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~- 371 (424)
+.+ +.....+..+ ...+.+++|+|+|+ +|++.+. +..|.+||+.++.. .....
T Consensus 235 ~~~-~~~~~~l~~~~~~~~~~~~~~~~~~SpDg~-~l~~~~~~~~~~~~i~~~d~~~g~~--------------~~~~~~ 298 (723)
T 1xfd_A 235 LNG-PTHDLEMMPPDDPRMREYYITMVKWATSTK-VAVTWLNRAQNVSILTLCDATTGVC--------------TKKHED 298 (723)
T ss_dssp SSS-SCCCEECCCCCCGGGSSEEEEEEEESSSSE-EEEEEEETTSCEEEEEEEETTTCCE--------------EEEEEE
T ss_pred CCC-CceeEEeeCCccCCCccceeEEEEEeCCCe-EEEEEEcCCCCeEEEEEEeCCCCcc--------------eEEEEe
Confidence 987 4444555543 56799999999996 5655543 35799999987532 22221
Q ss_pred CCCCCc----ceEEeCCCCCcEEEE-EeCCC------cEEEEe
Q 014454 372 GHTSKI----SDFSWNPCEDWVISS-VAEDN------ILQIWQ 403 (424)
Q Consensus 372 ~h~~~v----~~~~~~~~~~~~l~s-~~~dg------~i~vw~ 403 (424)
.+...+ ..++|+|+|+.+++. +..++ .|.+|+
T Consensus 299 ~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~l~~~d 341 (723)
T 1xfd_A 299 ESEAWLHRQNEEPVFSKDGRKFFFIRAIPQGGRGKFYHITVSS 341 (723)
T ss_dssp ECSSCCCCCCCCCEECTTSCSEEEEEEECCSSSSCEEEEEEEC
T ss_pred ccCCEEeccCCCceEcCCCCeEEEEEecccCCCcceeEEEEEe
Confidence 233333 378999999976554 55677 566777
No 149
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.85 E-value=3.9e-19 Score=162.76 Aligned_cols=238 Identities=10% Similarity=0.008 Sum_probs=164.2
Q ss_pred EEEecCCCCcEEEEEeCCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCC-CceeEEEecCCCCceEEEEeCCCcEEEEeC
Q 014454 130 RARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHS-TEGYGLSWSKFKEGHLLSGSDDAQICLWDI 208 (424)
Q Consensus 130 ~~~~~p~~~~~latg~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~h~-~~v~~l~~~~~~~~~l~s~~~dg~i~iwd~ 208 (424)
.+++++++ .++++++.++.|++||..+ .+....+..+. ..+..++|+|++..+++++..++.|.+||+
T Consensus 4 g~~~~~~~-~~~v~~~~~~~v~~~d~~~----------~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~ 72 (349)
T 1jmx_B 4 GPALKAGH-EYMIVTNYPNNLHVVDVAS----------DTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDL 72 (349)
T ss_dssp CCCCCTTC-EEEEEEETTTEEEEEETTT----------TEEEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEET
T ss_pred cccccCCC-EEEEEeCCCCeEEEEECCC----------CcEEEEEecCCCCCCceeEECCCCCEEEEEeCCCCcEEEEeC
Confidence 45677755 4889999999999999976 33344444332 257899999998755566667899999999
Q ss_pred CCCCCCCcccceeeeec-C-----CccEeeEEEecCCCcEEEEEeC-----------CCeEEEEEcCCCCCCCCeeeeec
Q 014454 209 NAAPKNKSLEAMQIFKV-H-----EGVVEDVAWHLRHEYLFGSVGD-----------DQYLLIWDLRTPSVSKPVQSVVA 271 (424)
Q Consensus 209 ~~~~~~~~~~~~~~~~~-~-----~~~v~~~~~~~~~~~~~~s~~~-----------dg~i~i~d~~~~~~~~~~~~~~~ 271 (424)
.+++. ...+.. + ...+..++|+|+++.++++... ++.|.+||+.+++....+....
T Consensus 73 ~t~~~------~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~- 145 (349)
T 1jmx_B 73 DTCKN------TFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFP- 145 (349)
T ss_dssp TTTEE------EEEEESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEE-
T ss_pred CCCcE------EEEEEcccccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeecc-
Confidence 76532 222221 1 2337899999999876644432 4899999998855333344433
Q ss_pred cCCCeeEEEecCCCCeEEEEEeCCCcEEEEECCCCCCcceEecCCC----------------------------------
Q 014454 272 HQSEVNCLAFNPFNEWILATGSTDKTVKLFDLRKISTALHTFDSHK---------------------------------- 317 (424)
Q Consensus 272 ~~~~v~~v~~~~~~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~~h~---------------------------------- 317 (424)
+...+.+++|+|++. +++ ++ +.|.+||+.+ ++.+..+..+.
T Consensus 146 ~~~~~~~~~~s~dg~-l~~-~~--~~i~~~d~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (349)
T 1jmx_B 146 MPRQVYLMRAADDGS-LYV-AG--PDIYKMDVKT-GKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFK 220 (349)
T ss_dssp CCSSCCCEEECTTSC-EEE-ES--SSEEEECTTT-CCEEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-
T ss_pred CCCcccceeECCCCc-EEE-cc--CcEEEEeCCC-CceeccccccccCCccccCccceeeecCCCcceeEEeeeeeeecC
Confidence 344689999999998 555 33 3499999987 44444443221
Q ss_pred ----------------------------------CCEEEEEEcC-CCCcEEEEEECCCeEEEeeCCCCCcccCCCCcCCC
Q 014454 318 ----------------------------------EEVFQVGWNP-KNETILASCCLGRRLMVWDLSRIDEEQTPEDAEDG 362 (424)
Q Consensus 318 ----------------------------------~~v~~~~~sp-~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~ 362 (424)
..+..++|+| +++ +++++ ++.|.+||+.++
T Consensus 221 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~dg~-~l~~~--~~~v~~~d~~~~------------ 285 (349)
T 1jmx_B 221 DDKQDPATADLLYGYLSVDLKTGKTHTQEFADLTELYFTGLRSPKDPN-QIYGV--LNRLAKYDLKQR------------ 285 (349)
T ss_dssp ------CCCEEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECSSCTT-EEEEE--ESEEEEEETTTT------------
T ss_pred CCcCCccccccceeEEEEeccCCcEEecccccCCCcceeeEecCCCCC-EEEEE--cCeEEEEECccC------------
Confidence 1456778889 886 45555 889999999874
Q ss_pred CCeeeEEEcCCCCCcceEEeCCCCCcEEEEEeCCCcEEEEecCCccC
Q 014454 363 PPELLFIHGGHTSKISDFSWNPCEDWVISSVAEDNILQIWQMAENIY 409 (424)
Q Consensus 363 ~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~ 409 (424)
+.+..+.. ...+.+++|+|+++++ ++++.++.|++||+.++..
T Consensus 286 --~~~~~~~~-~~~~~~~~~s~dg~~l-~~~~~~~~v~v~d~~~~~~ 328 (349)
T 1jmx_B 286 --KLIKAANL-DHTYYCVAFDKKGDKL-YLGGTFNDLAVFNPDTLEK 328 (349)
T ss_dssp --EEEEEEEC-SSCCCEEEECSSSSCE-EEESBSSEEEEEETTTTEE
T ss_pred --eEEEEEcC-CCCccceEECCCCCEE-EEecCCCeEEEEeccccce
Confidence 33333332 2347899999999864 4567889999999987643
No 150
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.85 E-value=2.3e-19 Score=180.45 Aligned_cols=258 Identities=12% Similarity=0.125 Sum_probs=173.9
Q ss_pred EEeccCCceeEEEecCCCCcEEEEEeCCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCC--------------CceeEEE
Q 014454 120 QQINHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHS--------------TEGYGLS 185 (424)
Q Consensus 120 ~~~~h~~~v~~~~~~p~~~~~latg~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~h~--------------~~v~~l~ 185 (424)
....+.+.+.+++|+|+++ .||++ .++.|++|++....... .........+. ..+.+++
T Consensus 115 ~l~~~~~~~~~~~~SpdG~-~la~~-~~~~i~v~~~~~~~~~~-----g~~~~~~~~~~~~~~~g~~~~~ee~~~~~~~~ 187 (706)
T 2z3z_A 115 YLFDTNEETASLDFSPVGD-RVAYV-RNHNLYIARGGKLGEGM-----SRAIAVTIDGTETLVYGQAVHQREFGIEKGTF 187 (706)
T ss_dssp EEECCTTCCTTCEECTTSS-EEEEE-ETTEEEEEECBCTTSCC-----CCCEESCSCCBTTEEESSCCGGGCTTCCCSEE
T ss_pred EccCCcccccCCcCCCCCC-EEEEE-ECCeEEEEecCcccccC-----CCcEEeccCCCCCeEcccchhhhhcCCCceEE
Confidence 3456778899999999997 56664 67999999987510000 00111111111 2258999
Q ss_pred ecCCCCceEEEEe---------------------------------CCCcEEEEeCCCCCCCCcccceeeeecCCccEee
Q 014454 186 WSKFKEGHLLSGS---------------------------------DDAQICLWDINAAPKNKSLEAMQIFKVHEGVVED 232 (424)
Q Consensus 186 ~~~~~~~~l~s~~---------------------------------~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~ 232 (424)
|+|+++ +|++++ .+..|.+||+.++.. ..+.....|...+.+
T Consensus 188 ~SpDg~-~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~----~~~~~~~~~~~~~~~ 262 (706)
T 2z3z_A 188 WSPKGS-CLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGKT----VYLQTGEPKEKFLTN 262 (706)
T ss_dssp ECTTSS-EEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTEE----EECCCCSCTTCEEEE
T ss_pred ECCCCC-EEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCce----EeeccCCCCceeEee
Confidence 999998 677776 446799999976532 111111246678999
Q ss_pred EEEecCCCcEEEEEeCCC-----eEEEEEcCCCCCCCCeeeeeccC---CCeeEEEecC--CCCeEEEEEeCCCcEEEEE
Q 014454 233 VAWHLRHEYLFGSVGDDQ-----YLLIWDLRTPSVSKPVQSVVAHQ---SEVNCLAFNP--FNEWILATGSTDKTVKLFD 302 (424)
Q Consensus 233 ~~~~~~~~~~~~s~~~dg-----~i~i~d~~~~~~~~~~~~~~~~~---~~v~~v~~~~--~~~~~l~tg~~dg~i~iwd 302 (424)
++|+|+++.++ +++.++ .|++||+.++.....+.. ..+. ..+.+++|+| +++ ++++++.++.++||+
T Consensus 263 ~~~spdg~~l~-~~~~~~~~~~~~v~~~d~~~g~~~~~~~~-~~~~~~~~~~~~~~~sp~~dg~-~l~~~~~~g~~~l~~ 339 (706)
T 2z3z_A 263 LSWSPDENILY-VAEVNRAQNECKVNAYDAETGRFVRTLFV-ETDKHYVEPLHPLTFLPGSNNQ-FIWQSRRDGWNHLYL 339 (706)
T ss_dssp EEECTTSSEEE-EEEECTTSCEEEEEEEETTTCCEEEEEEE-EECSSCCCCCSCCEECTTCSSE-EEEEECTTSSCEEEE
T ss_pred EEEECCCCEEE-EEEeCCCCCeeEEEEEECCCCceeeEEEE-ccCCCeECccCCceeecCCCCE-EEEEEccCCccEEEE
Confidence 99999998665 555554 899999988732111111 1122 2347789999 887 688888999999998
Q ss_pred CCCCCCcceEecCCCCCEEE-EEEcCCCCcEEEEEECCC----eEEEeeCCCCCcccCCCCcCCCCCeeeEEEcCCCCCc
Q 014454 303 LRKISTALHTFDSHKEEVFQ-VGWNPKNETILASCCLGR----RLMVWDLSRIDEEQTPEDAEDGPPELLFIHGGHTSKI 377 (424)
Q Consensus 303 ~~~~~~~~~~~~~h~~~v~~-~~~sp~~~~~l~s~~~dg----~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v 377 (424)
+...+..+..+..|...+.. ++|+|+++.++++++.++ .|..||+..+. ...+ .|...+
T Consensus 340 ~~~~~~~~~~l~~~~~~v~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~~~---------------~~~l-~~~~~~ 403 (706)
T 2z3z_A 340 YDTTGRLIRQVTKGEWEVTNFAGFDPKGTRLYFESTEASPLERHFYCIDIKGGK---------------TKDL-TPESGM 403 (706)
T ss_dssp EETTSCEEEECCCSSSCEEEEEEECTTSSEEEEEESSSCTTCBEEEEEETTCCC---------------CEES-CCSSSE
T ss_pred EECCCCEEEecCCCCeEEEeeeEEcCCCCEEEEEecCCCCceEEEEEEEcCCCC---------------ceec-cCCCce
Confidence 87435667777778888877 899999986666666665 56666765532 1111 245568
Q ss_pred ceEEeCCCCCcEEEEEeCC---CcEEEEecCCcc
Q 014454 378 SDFSWNPCEDWVISSVAED---NILQIWQMAENI 408 (424)
Q Consensus 378 ~~~~~~~~~~~~l~s~~~d---g~i~vw~~~~~~ 408 (424)
..++|+|++++++++++.+ +.|++|++.++.
T Consensus 404 ~~~~~spdg~~l~~~~~~~~~p~~i~l~d~~~~~ 437 (706)
T 2z3z_A 404 HRTQLSPDGSAIIDIFQSPTVPRKVTVTNIGKGS 437 (706)
T ss_dssp EEEEECTTSSEEEEEEECSSCSCEEEEEESSSCE
T ss_pred EEEEECCCCCEEEEEecCCCCCcEEEEEECCCCe
Confidence 8999999999655555544 569999998764
No 151
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.84 E-value=2.3e-18 Score=157.84 Aligned_cols=223 Identities=6% Similarity=0.045 Sum_probs=151.8
Q ss_pred cEEEEEE-eccCCceeEEEecCCCCcEEEEEeCCCeEEEEeCCCCCCCCCCCCCCCCcEEEec---------CCCceeEE
Q 014454 115 KVQIIQQ-INHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRG---------HSTEGYGL 184 (424)
Q Consensus 115 ~~~~~~~-~~h~~~v~~~~~~p~~~~~latg~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~---------h~~~v~~l 184 (424)
..+.+.. ..+...+..++|+|+++.+++++..++.|.+|++... +.......+.. +...+.++
T Consensus 74 ~~~~~~~~~~~~~~p~~~a~spdg~~l~~~~~~~~~v~v~~~~~~-------g~~~~~~~~~~~~~~p~~~~~~~~~~~~ 146 (347)
T 3hfq_A 74 TAHKLNTVVAPGTPPAYVAVDEARQLVYSANYHKGTAEVMKIAAD-------GALTLTDTVQHSGHGPRPEQDGSHIHYT 146 (347)
T ss_dssp EEEEEEEEEEESCCCSEEEEETTTTEEEEEETTTTEEEEEEECTT-------SCEEEEEEEECCCCCSSTTCSSCCEEEE
T ss_pred cEEEeeeeecCCCCCEEEEECCCCCEEEEEeCCCCEEEEEEeCCC-------CCeeecceeecCCCCCCccccCCCceEE
Confidence 3333333 4577889999999999855554447899999999641 11122222221 12347889
Q ss_pred EecCCCCceEEEEeCCCcEEEEeCCCCCCCCcccceeeeec-CCccEeeEEEecCCCcEEEEEeCCCeEEEEEcCCCCC-
Q 014454 185 SWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKV-HEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSV- 262 (424)
Q Consensus 185 ~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~~s~~~dg~i~i~d~~~~~~- 262 (424)
+|+|++. ++++...++.|.+|++..... +.....+.. ....+..++|+|+++.++++...++.|.+|++.....
T Consensus 147 ~~spdg~-l~v~~~~~~~v~~~~~~~~g~---~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~ 222 (347)
T 3hfq_A 147 DLTPDNR-LAVIDLGSDKVYVYNVSDAGQ---LSEQSVLTMEAGFGPRHLVFSPDGQYAFLAGELSSQIASLKYDTQTGA 222 (347)
T ss_dssp EECTTSC-EEEEETTTTEEEEEEECTTSC---EEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEEETTTTE
T ss_pred EECCCCc-EEEEeCCCCEEEEEEECCCCc---EEEeeeEEcCCCCCCceEEECCCCCEEEEEeCCCCEEEEEEecCCCCc
Confidence 9999998 788888899999999983211 122222222 2336788999999988887788899999999885221
Q ss_pred CCCeeeeeccC------CCeeEEEecCCCCeEEEEEeCCCcEEEEECCCCC--CcceEecCCCCCEEEEEEcCCCCcEEE
Q 014454 263 SKPVQSVVAHQ------SEVNCLAFNPFNEWILATGSTDKTVKLFDLRKIS--TALHTFDSHKEEVFQVGWNPKNETILA 334 (424)
Q Consensus 263 ~~~~~~~~~~~------~~v~~v~~~~~~~~~l~tg~~dg~i~iwd~~~~~--~~~~~~~~h~~~v~~~~~sp~~~~~l~ 334 (424)
...+..+.... ..+..++|+|+|++++++...++.|.+||+...+ ..+..+..+...+..++|+|+++.+++
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~l~v~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~spdg~~l~v 302 (347)
T 3hfq_A 223 FTQLGIVKTIPADYTAHNGAAAIRLSHDGHFLYVSNRGYNTLAVFAVTADGHLTLIQQISTEGDFPRDFDLDPTEAFVVV 302 (347)
T ss_dssp EEEEEEEESSCTTCCSCCEEEEEEECTTSCEEEEEEETTTEEEEEEECGGGCEEEEEEEECSSSCCCEEEECTTSSEEEE
T ss_pred eEEeeeeeecCCCCCCCCcceeEEECCCCCEEEEEeCCCCEEEEEEECCCCcEEEeEEEecCCCCcCeEEECCCCCEEEE
Confidence 11122222222 3488899999999766788889999999997422 345556666677899999999975444
Q ss_pred EEECCCeEEEeeCC
Q 014454 335 SCCLGRRLMVWDLS 348 (424)
Q Consensus 335 s~~~dg~i~iwd~~ 348 (424)
++..++.|.+|++.
T Consensus 303 ~~~~~~~v~v~~~d 316 (347)
T 3hfq_A 303 VNQNTDNATLYARD 316 (347)
T ss_dssp EETTTTEEEEEEEC
T ss_pred EEcCCCcEEEEEEe
Confidence 44456899999554
No 152
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.84 E-value=2.1e-19 Score=180.75 Aligned_cols=244 Identities=10% Similarity=0.075 Sum_probs=169.3
Q ss_pred CCceeEEEecCCCCcEEEEEeCCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCceeEEEecCCCCceEEEEeCCCcEE
Q 014454 125 DGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDDAQIC 204 (424)
Q Consensus 125 ~~~v~~~~~~p~~~~~latg~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~ 204 (424)
...|.+++|+|+ ..++++ .++.|++||+.+ .....+..+...+.+++|+|+|+ .|+++ .++.|+
T Consensus 81 ~~~v~~~~~spd-~~~~~~--~~~~i~~~d~~~-----------~~~~~l~~~~~~~~~~~~SpdG~-~la~~-~~~~i~ 144 (706)
T 2z3z_A 81 AFPSFRTLDAGR-GLVVLF--TQGGLVGFDMLA-----------RKVTYLFDTNEETASLDFSPVGD-RVAYV-RNHNLY 144 (706)
T ss_dssp -CCCEEEEETTT-TEEEEE--ETTEEEEEETTT-----------TEEEEEECCTTCCTTCEECTTSS-EEEEE-ETTEEE
T ss_pred ccCceeEEECCC-CeEEEE--ECCEEEEEECCC-----------CceEEccCCcccccCCcCCCCCC-EEEEE-ECCeEE
Confidence 367999999998 544444 359999999976 22345566777899999999998 57774 679999
Q ss_pred EEeCCC-----CCCCCcccceeeeecCCc--------------cEeeEEEecCCCcEEEEEe------------------
Q 014454 205 LWDINA-----APKNKSLEAMQIFKVHEG--------------VVEDVAWHLRHEYLFGSVG------------------ 247 (424)
Q Consensus 205 iwd~~~-----~~~~~~~~~~~~~~~~~~--------------~v~~~~~~~~~~~~~~s~~------------------ 247 (424)
+|++.+ +... .....+.. .+.+++|+|+++.++ +++
T Consensus 145 v~~~~~~~~~~g~~~------~~~~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg~~la-~~~~d~~~~~~~~~~~~~~~~ 217 (706)
T 2z3z_A 145 IARGGKLGEGMSRAI------AVTIDGTETLVYGQAVHQREFGIEKGTFWSPKGSCLA-FYRMDQSMVKPTPIVDYHPLE 217 (706)
T ss_dssp EEECBCTTSCCCCCE------ESCSCCBTTEEESSCCGGGCTTCCCSEEECTTSSEEE-EEEEECTTSCCEEEEECCSSS
T ss_pred EEecCcccccCCCcE------EeccCCCCCeEcccchhhhhcCCCceEEECCCCCEEE-EEEECCCCCceEEeeccCCCC
Confidence 999987 5321 11111222 258999999998665 554
Q ss_pred ---------------CCCeEEEEEcCCCCCCCCeeeeeccCCCeeEEEecCCCCeEEEEEeCCC-----cEEEEECCCCC
Q 014454 248 ---------------DDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATGSTDK-----TVKLFDLRKIS 307 (424)
Q Consensus 248 ---------------~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~l~tg~~dg-----~i~iwd~~~~~ 307 (424)
.+..|++||+.++... .+.....|...+.+++|+|+++. |++++.++ .|.+||+.+ +
T Consensus 218 ~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~~-~~~~~~~~~~~~~~~~~spdg~~-l~~~~~~~~~~~~~v~~~d~~~-g 294 (706)
T 2z3z_A 218 AESKPLYYPMAGTPSHHVTVGIYHLATGKTV-YLQTGEPKEKFLTNLSWSPDENI-LYVAEVNRAQNECKVNAYDAET-G 294 (706)
T ss_dssp CEEEEECCCBTTSCCCEEEEEEEETTTTEEE-ECCCCSCTTCEEEEEEECTTSSE-EEEEEECTTSCEEEEEEEETTT-C
T ss_pred CceEEeeCCCCCCCCCeeEEEEEECCCCceE-eeccCCCCceeEeeEEEECCCCE-EEEEEeCCCCCeeEEEEEECCC-C
Confidence 4467999999876521 11111246678999999999985 66666554 899999987 4
Q ss_pred CcceEec--CCCC---CEEEEEEcC--CCCcEEEEEECCCeEEEeeCCCCCcccCCCCcCCCCCeeeEEEcCCCCCcce-
Q 014454 308 TALHTFD--SHKE---EVFQVGWNP--KNETILASCCLGRRLMVWDLSRIDEEQTPEDAEDGPPELLFIHGGHTSKISD- 379 (424)
Q Consensus 308 ~~~~~~~--~h~~---~v~~~~~sp--~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~- 379 (424)
.....+. .+.. .+..++|+| +++ ++++++.|+.++||.+.... ..+..+..|...+..
T Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~sp~~dg~-~l~~~~~~g~~~l~~~~~~~-------------~~~~~l~~~~~~v~~~ 360 (706)
T 2z3z_A 295 RFVRTLFVETDKHYVEPLHPLTFLPGSNNQ-FIWQSRRDGWNHLYLYDTTG-------------RLIRQVTKGEWEVTNF 360 (706)
T ss_dssp CEEEEEEEEECSSCCCCCSCCEECTTCSSE-EEEEECTTSSCEEEEEETTS-------------CEEEECCCSSSCEEEE
T ss_pred ceeeEEEEccCCCeECccCCceeecCCCCE-EEEEEccCCccEEEEEECCC-------------CEEEecCCCCeEEEee
Confidence 2222222 2222 346789999 986 78888899999999876211 334455666667776
Q ss_pred EEeCCCCCcEEEEEeCCC----cEEEEecCCcc
Q 014454 380 FSWNPCEDWVISSVAEDN----ILQIWQMAENI 408 (424)
Q Consensus 380 ~~~~~~~~~~l~s~~~dg----~i~vw~~~~~~ 408 (424)
++|+|+++.++++++.++ .|..|++.++.
T Consensus 361 ~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~~~ 393 (706)
T 2z3z_A 361 AGFDPKGTRLYFESTEASPLERHFYCIDIKGGK 393 (706)
T ss_dssp EEECTTSSEEEEEESSSCTTCBEEEEEETTCCC
T ss_pred eEEcCCCCEEEEEecCCCCceEEEEEEEcCCCC
Confidence 799999997667766665 67777776654
No 153
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.83 E-value=6.5e-19 Score=177.66 Aligned_cols=246 Identities=7% Similarity=0.005 Sum_probs=158.5
Q ss_pred ceeEEEecCCCCcEEEEEeCC---------CeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCceeEEEecCCCCceEEEE
Q 014454 127 EVNRARYMPQNPFLIATKTVS---------AEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSG 197 (424)
Q Consensus 127 ~v~~~~~~p~~~~~latg~~d---------g~v~iw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~ 197 (424)
.|.+++|+|+++ .||+++.+ +.|++||+.+. ....+....+|...+..++|+|+|+ .|+.+
T Consensus 62 ~v~~~~~SpDg~-~l~~~~~~~~~~~~~~~~~i~~~d~~~~--------~~~~l~~~~~~~~~~~~~~~SPdG~-~la~~ 131 (723)
T 1xfd_A 62 RAIRYEISPDRE-YALFSYNVEPIYQHSYTGYYVLSKIPHG--------DPQSLDPPEVSNAKLQYAGWGPKGQ-QLIFI 131 (723)
T ss_dssp TCSEEEECTTSS-EEEEEESCCCCSSSCCCSEEEEEESSSC--------CCEECCCTTCCSCCCSBCCBCSSTT-CEEEE
T ss_pred ccceEEECCCCC-EEEEEecCccceeecceeeEEEEECCCC--------ceEeccCCccccccccccEECCCCC-EEEEE
Confidence 489999999997 67776653 78999999872 1111111223555688999999998 58877
Q ss_pred eCCCcEEEEeCCCCCCCCcccceeeeecCCc------------------cEeeEEEecCCCcEEEEEeCCC---------
Q 014454 198 SDDAQICLWDINAAPKNKSLEAMQIFKVHEG------------------VVEDVAWHLRHEYLFGSVGDDQ--------- 250 (424)
Q Consensus 198 ~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~------------------~v~~~~~~~~~~~~~~s~~~dg--------- 250 (424)
+. +.|++||+.++.. ......+.. .+.+++|+|+++.++ +++.++
T Consensus 132 ~~-~~i~~~~~~~g~~------~~~~~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~SpDg~~la-~~~~~~~~~~~~~~~ 203 (723)
T 1xfd_A 132 FE-NNIYYCAHVGKQA------IRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLA-YAAINDSRVPIMELP 203 (723)
T ss_dssp ET-TEEEEESSSSSCC------EEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTSSEEE-EEEEECTTSCEEEEC
T ss_pred EC-CeEEEEECCCCce------EEEecCCCCCceECcccceeEEEEeccCcceEEECCCCCEEE-EEEECCCccceEEee
Confidence 75 7999999987643 111222222 237899999998665 544332
Q ss_pred -------------------------eEEEEEcCCCCCCCCeeeeec------cCCCeeEEEecCCCCeEEEEEeC----C
Q 014454 251 -------------------------YLLIWDLRTPSVSKPVQSVVA------HQSEVNCLAFNPFNEWILATGST----D 295 (424)
Q Consensus 251 -------------------------~i~i~d~~~~~~~~~~~~~~~------~~~~v~~v~~~~~~~~~l~tg~~----d 295 (424)
.|++||+.++.. ...+.. +...+.+++|+|+|+ +|++... +
T Consensus 204 ~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~~~---~~~l~~~~~~~~~~~~~~~~~~SpDg~-~l~~~~~~~~~~ 279 (723)
T 1xfd_A 204 TYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGPTH---DLEMMPPDDPRMREYYITMVKWATSTK-VAVTWLNRAQNV 279 (723)
T ss_dssp CCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSSCC---CEECCCCCCGGGSSEEEEEEEESSSSE-EEEEEEETTSCE
T ss_pred ccCCcCCCcceeccCCCCCCCCCeeEEEEEECCCCce---eEEeeCCccCCCccceeEEEEEeCCCe-EEEEEEcCCCCe
Confidence 799999988653 233333 256789999999998 4555432 3
Q ss_pred CcEEEEECCCCCCcceEecC-CCCCE----EEEEEcCCCCcEEEE-EECCC------eEEEeeCCCCCcccCCCCcCCCC
Q 014454 296 KTVKLFDLRKISTALHTFDS-HKEEV----FQVGWNPKNETILAS-CCLGR------RLMVWDLSRIDEEQTPEDAEDGP 363 (424)
Q Consensus 296 g~i~iwd~~~~~~~~~~~~~-h~~~v----~~~~~sp~~~~~l~s-~~~dg------~i~iwd~~~~~~~~~~~~~~~~~ 363 (424)
..|.+||+.+ ++....+.. +...+ ..++|+|+|+.++++ +..++ .|.+||+......
T Consensus 280 ~~i~~~d~~~-g~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~l~~~d~~~~~~~---------- 348 (723)
T 1xfd_A 280 SILTLCDATT-GVCTKKHEDESEAWLHRQNEEPVFSKDGRKFFFIRAIPQGGRGKFYHITVSSSQPNSSN---------- 348 (723)
T ss_dssp EEEEEEETTT-CCEEEEEEEECSSCCCCCCCCCEECTTSCSEEEEEEECCSSSSCEEEEEEECSSCCSSS----------
T ss_pred EEEEEEeCCC-CcceEEEEeccCCEEeccCCCceEcCCCCeEEEEEecccCCCcceeEEEEEeccCCCCc----------
Confidence 5799999987 454444432 33444 378999999876655 56677 4666663222110
Q ss_pred CeeeEEEcCCCCCcce-EEeCCCCCcEEEEEeCC--CcEEEEecCC
Q 014454 364 PELLFIHGGHTSKISD-FSWNPCEDWVISSVAED--NILQIWQMAE 406 (424)
Q Consensus 364 ~~~~~~~~~h~~~v~~-~~~~~~~~~~l~s~~~d--g~i~vw~~~~ 406 (424)
.....+..+...+.. ++|+|+++.+++++..+ +.++||++..
T Consensus 349 -~~~~~l~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~~~ 393 (723)
T 1xfd_A 349 -DNIQSITSGDWDVTKILAYDEKGNKIYFLSTEDLPRRRQLYSANT 393 (723)
T ss_dssp -CCCCBSCCSSSCEEEEEEEETTTTEEEEEESSSCTTCCEEEEECS
T ss_pred -cceeEeecCCeEEEeeeEEcCCCCEEEEEEcCCCCcceEEEEEeC
Confidence 001111122223444 69999999655555555 8899999864
No 154
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.82 E-value=3.3e-18 Score=179.15 Aligned_cols=246 Identities=11% Similarity=0.102 Sum_probs=180.6
Q ss_pred eccCCceeEEEecCCCCcEEEEEeCCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCceeEEEecCCCCceEEEEeCCC
Q 014454 122 INHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDDA 201 (424)
Q Consensus 122 ~~h~~~v~~~~~~p~~~~~latg~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg 201 (424)
..|.+.+.++.|+++ .++++++.++.+.||.+... ......+..|. .+..++|+|++. .|+.+ .++
T Consensus 200 ~~~~~~v~~~~~s~d--~l~~~~~~dg~~~l~~~~~~---------g~~~~~l~~~~-~~~~~~~SpDG~-~la~~-~~~ 265 (1045)
T 1k32_A 200 VDMSTHVSSPVIVGH--RIYFITDIDGFGQIYSTDLD---------GKDLRKHTSFT-DYYPRHLNTDGR-RILFS-KGG 265 (1045)
T ss_dssp ECCSSCCEEEEEETT--EEEEEECTTSSCEEEEEETT---------SCSCEECCCCC-SSCEEEEEESSS-CEEEE-ETT
T ss_pred cCCCCcccceEEeCC--EEEEEEeccCceEEEEEeCC---------CCcceEecCCC-CcceeeEcCCCC-EEEEE-eCC
Confidence 689999999999986 47788888899999987641 12234455554 467789999998 57766 489
Q ss_pred cEEEEeCCCCCCCCcccc-----eeeeecCCccEeeEEEe-cCCCcEEEEEeCCCeEEEEEcCCCCCCCCeeeeeccCC-
Q 014454 202 QICLWDINAAPKNKSLEA-----MQIFKVHEGVVEDVAWH-LRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQS- 274 (424)
Q Consensus 202 ~i~iwd~~~~~~~~~~~~-----~~~~~~~~~~v~~~~~~-~~~~~~~~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~- 274 (424)
.|.+|++..... ..+.. ......|...+.+++|+ |++..++ +++ ++.|.+|++..+. ...+..|..
T Consensus 266 ~i~~~d~~~~~l-~~l~~~~~~~~~~~~~~~~~v~~~~~S~pdG~~la-~~~-~~~i~~~~~~~~~----~~~~~~~~~~ 338 (1045)
T 1k32_A 266 SIYIFNPDTEKI-EKIEIGDLESPEDRIISIPSKFAEDFSPLDGDLIA-FVS-RGQAFIQDVSGTY----VLKVPEPLRI 338 (1045)
T ss_dssp EEEEECTTTCCE-EECCCCCCCBCCSEEEECGGGGEEEEEECGGGCEE-EEE-TTEEEEECTTSSB----EEECSCCSCE
T ss_pred EEEEecCCceEe-eeeccCcccccccccccccccceeeecCCCCCEEE-EEE-cCEEEEEcCCCCc----eEEccCCCcc
Confidence 999999833211 00000 00011245579999999 9997664 554 8899999998654 334556666
Q ss_pred CeeEEEecCCCCeEEEEEeCCCcEE-EEECCCCCCcceEecCCCCCEEEEEEcCCCCcEEEEEECCCeEEEeeCCCCCcc
Q 014454 275 EVNCLAFNPFNEWILATGSTDKTVK-LFDLRKISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEE 353 (424)
Q Consensus 275 ~v~~v~~~~~~~~~l~tg~~dg~i~-iwd~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~l~s~~~dg~i~iwd~~~~~~~ 353 (424)
.+..++|+ +++. |+.++.++.+. +||+.. +. ...+..|...+..++|+|+++ .|++++.++.|++||+.++
T Consensus 339 ~~~~~~~s-dg~~-l~~~s~~~~l~~~~d~~~-~~-~~~l~~~~~~~~~~~~SpDG~-~la~~~~~~~v~~~d~~tg--- 410 (1045)
T 1k32_A 339 RYVRRGGD-TKVA-FIHGTREGDFLGIYDYRT-GK-AEKFEENLGNVFAMGVDRNGK-FAVVANDRFEIMTVDLETG--- 410 (1045)
T ss_dssp EEEEECSS-SEEE-EEEEETTEEEEEEEETTT-CC-EEECCCCCCSEEEEEECTTSS-EEEEEETTSEEEEEETTTC---
T ss_pred eEEeeeEc-CCCe-EEEEECCCceEEEEECCC-CC-ceEecCCccceeeeEECCCCC-EEEEECCCCeEEEEECCCC---
Confidence 89999999 8874 77777788888 899876 33 344447788999999999996 6889999999999999875
Q ss_pred cCCCCcCCCCCeeeEEEcCCCCCcceEEeCCCCCcEEEEEeCC----------CcEEEEecCCcc
Q 014454 354 QTPEDAEDGPPELLFIHGGHTSKISDFSWNPCEDWVISSVAED----------NILQIWQMAENI 408 (424)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d----------g~i~vw~~~~~~ 408 (424)
.+.....+|...+..++|+|+|++ |++++.+ +.|++||+.++.
T Consensus 411 -----------~~~~~~~~~~~~v~~~~~SpDG~~-la~~~~~~~~~~~~~~~~~i~l~d~~~g~ 463 (1045)
T 1k32_A 411 -----------KPTVIERSREAMITDFTISDNSRF-IAYGFPLKHGETDGYVMQAIHVYDMEGRK 463 (1045)
T ss_dssp -----------CEEEEEECSSSCCCCEEECTTSCE-EEEEEEECSSTTCSCCEEEEEEEETTTTE
T ss_pred -----------ceEEeccCCCCCccceEECCCCCe-EEEEecCccccccCCCCCeEEEEECCCCc
Confidence 334445578888999999999995 5555443 489999998764
No 155
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.82 E-value=1.8e-18 Score=181.11 Aligned_cols=234 Identities=9% Similarity=0.027 Sum_probs=177.6
Q ss_pred CceeEEEecCCCCcEEEEEeCCCeEEEEeCCCCCCCCCCCCCCCCcEEEec-----------CCCceeEEEec-CCCCce
Q 014454 126 GEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRG-----------HSTEGYGLSWS-KFKEGH 193 (424)
Q Consensus 126 ~~v~~~~~~p~~~~~latg~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~-----------h~~~v~~l~~~-~~~~~~ 193 (424)
..+..++|+|++. .||.+ .++.|++|++.. ..+..+.+ |...+.+++|+ |++. .
T Consensus 245 ~~~~~~~~SpDG~-~la~~-~~~~i~~~d~~~-----------~~l~~l~~~~~~~~~~~~~~~~~v~~~~~S~pdG~-~ 310 (1045)
T 1k32_A 245 TDYYPRHLNTDGR-RILFS-KGGSIYIFNPDT-----------EKIEKIEIGDLESPEDRIISIPSKFAEDFSPLDGD-L 310 (1045)
T ss_dssp CSSCEEEEEESSS-CEEEE-ETTEEEEECTTT-----------CCEEECCCCCCCBCCSEEEECGGGGEEEEEECGGG-C
T ss_pred CCcceeeEcCCCC-EEEEE-eCCEEEEecCCc-----------eEeeeeccCcccccccccccccccceeeecCCCCC-E
Confidence 3567889999997 56665 489999999843 11112222 45578999999 9998 5
Q ss_pred EEEEeCCCcEEEEeCCCCCCCCcccceeeeecCCc-cEeeEEEecCCCcEEEEEeCCCeEE-EEEcCCCCCCCCeeeeec
Q 014454 194 LLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEG-VVEDVAWHLRHEYLFGSVGDDQYLL-IWDLRTPSVSKPVQSVVA 271 (424)
Q Consensus 194 l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~-~v~~~~~~~~~~~~~~s~~~dg~i~-i~d~~~~~~~~~~~~~~~ 271 (424)
|++++ ++.|.+|++..+. ...+..|.. .+..++|+ ++..+ ++++.++.+. +||+..+. ...+..
T Consensus 311 la~~~-~~~i~~~~~~~~~-------~~~~~~~~~~~~~~~~~s-dg~~l-~~~s~~~~l~~~~d~~~~~----~~~l~~ 376 (1045)
T 1k32_A 311 IAFVS-RGQAFIQDVSGTY-------VLKVPEPLRIRYVRRGGD-TKVAF-IHGTREGDFLGIYDYRTGK----AEKFEE 376 (1045)
T ss_dssp EEEEE-TTEEEEECTTSSB-------EEECSCCSCEEEEEECSS-SEEEE-EEEETTEEEEEEEETTTCC----EEECCC
T ss_pred EEEEE-cCEEEEEcCCCCc-------eEEccCCCcceEEeeeEc-CCCeE-EEEECCCceEEEEECCCCC----ceEecC
Confidence 77776 7899999987542 223445666 89999999 87655 5677788888 99988754 334446
Q ss_pred cCCCeeEEEecCCCCeEEEEEeCCCcEEEEECCCCCCcceEecCCCCCEEEEEEcCCCCcEEEEEECC----------Ce
Q 014454 272 HQSEVNCLAFNPFNEWILATGSTDKTVKLFDLRKISTALHTFDSHKEEVFQVGWNPKNETILASCCLG----------RR 341 (424)
Q Consensus 272 ~~~~v~~v~~~~~~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~l~s~~~d----------g~ 341 (424)
|...+.+++|+|+++ .|++++.++.|++||+.+ ++.......|...+.+++|+|+|+ +|++++.+ +.
T Consensus 377 ~~~~~~~~~~SpDG~-~la~~~~~~~v~~~d~~t-g~~~~~~~~~~~~v~~~~~SpDG~-~la~~~~~~~~~~~~~~~~~ 453 (1045)
T 1k32_A 377 NLGNVFAMGVDRNGK-FAVVANDRFEIMTVDLET-GKPTVIERSREAMITDFTISDNSR-FIAYGFPLKHGETDGYVMQA 453 (1045)
T ss_dssp CCCSEEEEEECTTSS-EEEEEETTSEEEEEETTT-CCEEEEEECSSSCCCCEEECTTSC-EEEEEEEECSSTTCSCCEEE
T ss_pred CccceeeeEECCCCC-EEEEECCCCeEEEEECCC-CceEEeccCCCCCccceEECCCCC-eEEEEecCccccccCCCCCe
Confidence 778899999999998 588899999999999987 566666668889999999999997 46665554 48
Q ss_pred EEEeeCCCCCcccCCCCcCCCCCeeeEEEcCCCCCcceEEeCCCCCcEEEEEeCCCcEEEEecCC
Q 014454 342 LMVWDLSRIDEEQTPEDAEDGPPELLFIHGGHTSKISDFSWNPCEDWVISSVAEDNILQIWQMAE 406 (424)
Q Consensus 342 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~vw~~~~ 406 (424)
|++||+..+ . ...+..|...+..++|+|+|+ .|++++.++...+|+...
T Consensus 454 i~l~d~~~g--------------~-~~~l~~~~~~~~~~~~spdG~-~l~~~s~~~~~~~~~~~~ 502 (1045)
T 1k32_A 454 IHVYDMEGR--------------K-IFAATTENSHDYAPAFDADSK-NLYYLSYRSLDPSPDRVV 502 (1045)
T ss_dssp EEEEETTTT--------------E-EEECSCSSSBEEEEEECTTSC-EEEEEESCCCCCEECSSS
T ss_pred EEEEECCCC--------------c-EEEeeCCCcccCCceEcCCCC-EEEEEecccCCcCcchhc
Confidence 999999863 2 455567777788999999999 577778778788887653
No 156
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.81 E-value=2.7e-17 Score=151.58 Aligned_cols=241 Identities=10% Similarity=0.108 Sum_probs=158.2
Q ss_pred EEEEEe----CCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCceeEEEecCCCCceEEEEeCC----CcEEEEeCCCC
Q 014454 140 LIATKT----VSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDD----AQICLWDINAA 211 (424)
Q Consensus 140 ~latg~----~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~d----g~i~iwd~~~~ 211 (424)
.+.+|+ .++.|++|.++... +........ +...+..++|+|++. +|++++.+ +.|.+|++...
T Consensus 15 ~~~vg~y~~~~~~~i~~~~~d~~~------g~~~~~~~~--~~~~p~~l~~spdg~-~l~~~~~~~~~~~~v~~~~~~~~ 85 (361)
T 3scy_A 15 TMLVGTYTSGNSKGIYTFRFNEET------GESLPLSDA--EVANPSYLIPSADGK-FVYSVNEFSKDQAAVSAFAFDKE 85 (361)
T ss_dssp EEEEEECCSSSCCEEEEEEEETTT------CCEEEEEEE--ECSCCCSEEECTTSS-EEEEEECCSSTTCEEEEEEEETT
T ss_pred EEEEEeccCCCCCCEEEEEEeCCC------CCEEEeecc--cCCCCceEEECCCCC-EEEEEEccCCCCCcEEEEEEeCC
Confidence 455554 35689999886411 112222222 677788999999987 68877775 89999998753
Q ss_pred CCCCcccceeeeecCCccEeeEEEecCCCcEEEEEeCCCeEEEEEcCCCCCCCCeeeeec-----------cCCCeeEEE
Q 014454 212 PKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVA-----------HQSEVNCLA 280 (424)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~dg~i~i~d~~~~~~~~~~~~~~~-----------~~~~v~~v~ 280 (424)
. ..+..+.....+......+++ +++.++++...++.|.+|++........+..... +...+.+++
T Consensus 86 ~--g~~~~~~~~~~~~~~p~~~~~--dg~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 161 (361)
T 3scy_A 86 K--GTLHLLNTQKTMGADPCYLTT--NGKNIVTANYSGGSITVFPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVR 161 (361)
T ss_dssp T--TEEEEEEEEECSSSCEEEEEE--CSSEEEEEETTTTEEEEEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEE
T ss_pred C--CcEEEeeEeccCCCCcEEEEE--CCCEEEEEECCCCEEEEEEeCCCCcCcccceeEEccCCCCCccccCCCcceEEE
Confidence 1 122233334445556777777 6777776666889999999976443222221111 123458899
Q ss_pred ecCCCCeEEEEEeCCCcEEEEECCCCCC------c------ceEecCCCCCEEEEEEcCCCCcEEEEEECCCeEEEeeCC
Q 014454 281 FNPFNEWILATGSTDKTVKLFDLRKIST------A------LHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLS 348 (424)
Q Consensus 281 ~~~~~~~~l~tg~~dg~i~iwd~~~~~~------~------~~~~~~h~~~v~~~~~sp~~~~~l~s~~~dg~i~iwd~~ 348 (424)
|+|+++++++++..++.|.+|++..... . ......+...+..++|+|+++.+++++..++.|.+|++.
T Consensus 162 ~spdg~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~ 241 (361)
T 3scy_A 162 ITPDGKYLLADDLGTDQIHKFNINPNANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKFAYLINEIGGTVIAFRYA 241 (361)
T ss_dssp ECTTSSEEEEEETTTTEEEEEEECTTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTCEEEEEEEE
T ss_pred ECCCCCEEEEEeCCCCEEEEEEEcCCCCcccccceeecccccceecCCCCCCeEEEEcCCCCEEEEEcCCCCeEEEEEec
Confidence 9999997677776789999999886332 1 111223456788999999997544444478999999997
Q ss_pred CCCcccCCCCcCCCCCeeeEEE---cCCCCCcceEEeCCCCCcEEEEEeC-CCcEEEEecC
Q 014454 349 RIDEEQTPEDAEDGPPELLFIH---GGHTSKISDFSWNPCEDWVISSVAE-DNILQIWQMA 405 (424)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~~~~---~~h~~~v~~~~~~~~~~~~l~s~~~-dg~i~vw~~~ 405 (424)
.+.. ..+... ..+......++|+|++++++++... ++.|.+|++.
T Consensus 242 ~g~~------------~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~ 290 (361)
T 3scy_A 242 DGML------------DEIQTVAADTVNAQGSGDIHLSPDGKYLYASNRLKADGVAIFKVD 290 (361)
T ss_dssp TTEE------------EEEEEEESCSSCCCCEEEEEECTTSSEEEEEECSSSCEEEEEEEC
T ss_pred CCce------------EEeEEEecCCCCCCCcccEEECCCCCEEEEECCCCCCEEEEEEEc
Confidence 5321 112222 2233456799999999965566555 6899999996
No 157
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.80 E-value=1.2e-17 Score=164.14 Aligned_cols=274 Identities=11% Similarity=0.095 Sum_probs=183.7
Q ss_pred CCCccEEEEccCCCCCCCCCCceEEEEEeecCCCCCCCeEEEEEEECCCCCCCcccCCCCCcCCCCCCCCCCCCcEEEEE
Q 014454 41 EWPSLTVEWLPDREEPPGKDYSVQKMILGTHTSENEPNYLMLAQVQLPLDDSENDARHYDDDRSDFGGFGCANGKVQIIQ 120 (424)
Q Consensus 41 ~~p~~~~~~~p~~~~~~~~~~~~~~~~~gt~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 120 (424)
..|..++.|.|++ .++++++.. +..+.|+.+. .+.. .+
T Consensus 21 ~~~~~~~~~~~DG----------~~la~~s~~----~g~~~lw~~~--------------------------~g~~--~~ 58 (582)
T 3o4h_A 21 AVEKYSLQGVVDG----------DKLLVVGFS----EGSVNAYLYD--------------------------GGET--VK 58 (582)
T ss_dssp HSCEEEEEEEETT----------TEEEEEEEE----TTEEEEEEEE--------------------------TTEE--EE
T ss_pred ccchheeecCCCC----------CeEEEEEcc----CCceeEEEEc--------------------------CCCc--Ee
Confidence 4579999999987 456665532 3356666652 0111 22
Q ss_pred EeccC-CceeEEEecCCCCcEEEEEeC---CCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCceeEEEecCCCCceEEE
Q 014454 121 QINHD-GEVNRARYMPQNPFLIATKTV---SAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLS 196 (424)
Q Consensus 121 ~~~h~-~~v~~~~~~p~~~~~latg~~---dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s 196 (424)
...|. ..+..++|+|+ .++++++. +....||.+..... .. ...+..+ ..+...+|+|++...+++
T Consensus 59 lt~~~~~~~~~~~~spd--~~l~~~~~~~g~~~~~l~~~~~~~~-------g~-~~~l~~~-~~~~~~~~s~dg~~~~~~ 127 (582)
T 3o4h_A 59 LNREPINSVLDPHYGVG--RVILVRDVSKGAEQHALFKVNTSRP-------GE-EQRLEAV-KPMRILSGVDTGEAVVFT 127 (582)
T ss_dssp CCSSCCSEECEECTTCS--EEEEEEECSTTSCCEEEEEEETTST-------TC-CEECTTS-CSBEEEEEEECSSCEEEE
T ss_pred eecccccccccccCCCC--eEEEEeccCCCCcceEEEEEeccCC-------Cc-cccccCC-CCceeeeeCCCCCeEEEE
Confidence 23455 58999999997 47777664 45556655533000 01 1122222 234467889988765555
Q ss_pred EeCCCcEEEEeCCCCCCCCcccceeeeecCCccEeeEEEecCCCcEEEEEeCC----CeEEEEEcCCCCCCCCeeeeecc
Q 014454 197 GSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDD----QYLLIWDLRTPSVSKPVQSVVAH 272 (424)
Q Consensus 197 ~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~d----g~i~i~d~~~~~~~~~~~~~~~~ 272 (424)
++.++.+.+||+.++.. .. +..+.. .+++|+|+|+.+ ++++.+ +.|++||+.+++. ..+..|
T Consensus 128 s~~~~~~~l~d~~~g~~------~~-l~~~~~--~~~~~spDG~~l-a~~~~~~~~~~~i~~~d~~~g~~----~~l~~~ 193 (582)
T 3o4h_A 128 GATEDRVALYALDGGGL------RE-LARLPG--FGFVSDIRGDLI-AGLGFFGGGRVSLFTSNLSSGGL----RVFDSG 193 (582)
T ss_dssp EECSSCEEEEEEETTEE------EE-EEEESS--CEEEEEEETTEE-EEEEEEETTEEEEEEEETTTCCC----EEECCS
T ss_pred ecCCCCceEEEccCCcE------EE-eecCCC--ceEEECCCCCEE-EEEEEcCCCCeEEEEEcCCCCCc----eEeecC
Confidence 55555666999976521 12 222333 889999999865 455555 7799999988663 456678
Q ss_pred CCCeeEEEecCCCCeEEEEEeCCC--cEEEEECCCCCCcceEecCCCCCEEEEE--------EcCCCCcEEEEEECCCeE
Q 014454 273 QSEVNCLAFNPFNEWILATGSTDK--TVKLFDLRKISTALHTFDSHKEEVFQVG--------WNPKNETILASCCLGRRL 342 (424)
Q Consensus 273 ~~~v~~v~~~~~~~~~l~tg~~dg--~i~iwd~~~~~~~~~~~~~h~~~v~~~~--------~sp~~~~~l~s~~~dg~i 342 (424)
...+..++|+|+|+. |+++..++ .|++||+.+ ++.. .+..|...+..++ |+|+| .++++++.|+.+
T Consensus 194 ~~~~~~~~~SpDG~~-l~~~~~~~~~~i~~~d~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~spdg-~~~~~~~~~g~~ 269 (582)
T 3o4h_A 194 EGSFSSASISPGMKV-TAGLETAREARLVTVDPRD-GSVE-DLELPSKDFSSYRPTAITWLGYLPDG-RLAVVARREGRS 269 (582)
T ss_dssp SCEEEEEEECTTSCE-EEEEECSSCEEEEEECTTT-CCEE-ECCCSCSHHHHHCCSEEEEEEECTTS-CEEEEEEETTEE
T ss_pred CCccccceECCCCCE-EEEccCCCeeEEEEEcCCC-CcEE-EccCCCcChhhhhhccccceeEcCCC-cEEEEEEcCCcE
Confidence 888999999999995 66888888 899999987 4554 6677777777777 99999 689999999999
Q ss_pred EEeeCCCCCcccCCCCcCCCCCeeeEEEcCCCCCcceEEeCCCCCcEEEEEeCCCc---EEEEecCC
Q 014454 343 MVWDLSRIDEEQTPEDAEDGPPELLFIHGGHTSKISDFSWNPCEDWVISSVAEDNI---LQIWQMAE 406 (424)
Q Consensus 343 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~---i~vw~~~~ 406 (424)
+||++ +. ... .+...|.+++|+ +++ ++++++.+.. +.+|+..+
T Consensus 270 ~l~~~--g~--------------~~~---~~~~~v~~~~~s-dg~-~l~~~s~~~~p~~l~~~d~~~ 315 (582)
T 3o4h_A 270 AVFID--GE--------------RVE---APQGNHGRVVLW-RGK-LVTSHTSLSTPPRIVSLPSGE 315 (582)
T ss_dssp EEEET--TE--------------EEC---CCSSEEEEEEEE-TTE-EEEEEEETTEEEEEEEETTCC
T ss_pred EEEEE--CC--------------eec---cCCCceEEEEec-CCE-EEEEEcCCCCCCeEEEEcCCC
Confidence 99999 32 111 123457889999 887 5677666643 66666653
No 158
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.79 E-value=1.4e-17 Score=151.43 Aligned_cols=229 Identities=11% Similarity=0.000 Sum_probs=158.1
Q ss_pred cEEEEEeCCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCC-C-ceeEEEecCCCCceEEEEeCCCcEEEEeCCCCCCCCc
Q 014454 139 FLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHS-T-EGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKS 216 (424)
Q Consensus 139 ~~latg~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~h~-~-~v~~l~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~ 216 (424)
.++++++.++.|++||..+ ......+.... . .+.+++|+|++..++++++.++.|.+||+.+++.
T Consensus 2 ~~~v~~~~~~~v~~~d~~~----------~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~--- 68 (337)
T 1pby_B 2 DYILAPARPDKLVVIDTEK----------MAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGET--- 68 (337)
T ss_dssp EEEEEEETTTEEEEEETTT----------TEEEEEEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCCE---
T ss_pred cEEEEcCCCCeEEEEECCC----------CcEEEEEEcCCCCCCccceEEcCCCCEEEEEeCCCCeEEEEECCCCCe---
Confidence 3788899999999999976 33344444222 1 5789999999985566777789999999987632
Q ss_pred ccceeeeec-----CCccEeeEEEecCCCcEEEEEe-----------CCCeEEEEEcCCCCCCCCeeeeeccCCCeeEEE
Q 014454 217 LEAMQIFKV-----HEGVVEDVAWHLRHEYLFGSVG-----------DDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLA 280 (424)
Q Consensus 217 ~~~~~~~~~-----~~~~v~~~~~~~~~~~~~~s~~-----------~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~v~ 280 (424)
+..+.. +...+..++|+|+++.++++.. .++.|.+||+.+++. +..+.. ...+.+++
T Consensus 69 ---~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~---~~~~~~-~~~~~~~~ 141 (337)
T 1pby_B 69 ---LGRIDLSTPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSR---RKAFEA-PRQITMLA 141 (337)
T ss_dssp ---EEEEECCBTTEEEECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEE---EEEEEC-CSSCCCEE
T ss_pred ---EeeEEcCCcccccccccceEECCCCCEEEEEecccccccccccccCceEEEEECCCCcE---EEEEeC-CCCcceeE
Confidence 222221 1236788999999987664431 579999999987553 333333 45688899
Q ss_pred ecCCCCeEEEEEeCCCcEEEEECCCCCCcceEecCCCCCEEEEEEcCCCCcEEEEEECCC--------------------
Q 014454 281 FNPFNEWILATGSTDKTVKLFDLRKISTALHTFDSHKEEVFQVGWNPKNETILASCCLGR-------------------- 340 (424)
Q Consensus 281 ~~~~~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~l~s~~~dg-------------------- 340 (424)
|+|++.. |+++ ++.|.+||+.+ ++.+..+..+.. ...+.|+|++..+++++..++
T Consensus 142 ~s~dg~~-l~~~--~~~i~~~d~~~-~~~~~~~~~~~~-~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (337)
T 1pby_B 142 WARDGSK-LYGL--GRDLHVMDPEA-GTLVEDKPIQSW-EAETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTA 216 (337)
T ss_dssp ECTTSSC-EEEE--SSSEEEEETTT-TEEEEEECSTTT-TTTTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGG
T ss_pred ECCCCCE-EEEe--CCeEEEEECCC-CcEeeeeecccc-CCCceeCCCccEEeeeccCCCceeeeeeccccccccccccc
Confidence 9999986 4454 68999999987 566666654331 113378999875544443343
Q ss_pred ---eEEEeeCCCCCcccCCCCcCCCCCeeeEEEcCCCCCcceEEeCCCCCcEEEEEeCCCcEEEEecCCcc
Q 014454 341 ---RLMVWDLSRIDEEQTPEDAEDGPPELLFIHGGHTSKISDFSWNPCEDWVISSVAEDNILQIWQMAENI 408 (424)
Q Consensus 341 ---~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~ 408 (424)
.|.+||+..+.. . ......+...+.+++|+|++++ ++++ ++.|.+||+.++.
T Consensus 217 ~~~~v~~~d~~~~~~------------~-~~~~~~~~~~~~~~~~s~dg~~-l~~~--~~~v~~~d~~~~~ 271 (337)
T 1pby_B 217 YRTGLLTMDLETGEM------------A-MREVRIMDVFYFSTAVNPAKTR-AFGA--YNVLESFDLEKNA 271 (337)
T ss_dssp EEEEEEEEETTTCCE------------E-EEEEEECSSCEEEEEECTTSSE-EEEE--ESEEEEEETTTTE
T ss_pred cccceEEEeCCCCCc------------e-EeecCCCCCceeeEEECCCCCE-EEEe--CCeEEEEECCCCc
Confidence 468899877532 1 2334455667889999999995 5554 6899999998764
No 159
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.78 E-value=3.3e-16 Score=142.35 Aligned_cols=243 Identities=16% Similarity=0.116 Sum_probs=173.7
Q ss_pred CceeEEEecCCCCcEEEEEeCC------------------------CeEEEEeCCCCCCCCCCCCCCCCcEEEe-cCCCc
Q 014454 126 GEVNRARYMPQNPFLIATKTVS------------------------AEVYVFDYSKHPSKPPLDGACSPDLRLR-GHSTE 180 (424)
Q Consensus 126 ~~v~~~~~~p~~~~~latg~~d------------------------g~v~iw~~~~~~~~~~~~~~~~~~~~~~-~h~~~ 180 (424)
+.+.+|+++|++. ++++...+ +.|.+||..+ ......+. ++-..
T Consensus 24 ~~v~~va~d~~G~-l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~----------g~~~~~~~~~~~~~ 92 (329)
T 3fvz_A 24 GQVSGVALDSKNN-LVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNN----------AEILQSSGKNLFYL 92 (329)
T ss_dssp SCEEEEEECTTCC-EEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTT----------CCEEEEECTTTCSS
T ss_pred CCceEEEECCCCC-EEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCC----------CeEEeccCCCccCC
Confidence 5789999999986 67776666 4799999865 22222222 34457
Q ss_pred eeEEEecCCCCceEEEEeCCCcEEEEeCCCCCCCCcccceeee---------ecCCccEeeEEEecCCCcEEEEEe-CCC
Q 014454 181 GYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIF---------KVHEGVVEDVAWHLRHEYLFGSVG-DDQ 250 (424)
Q Consensus 181 v~~l~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~---------~~~~~~v~~~~~~~~~~~~~~s~~-~dg 250 (424)
+.+++++|++. ++++...++.|++|+...... .+..+ ..+-.....++++|++..++++.+ .++
T Consensus 93 p~gia~d~~g~-l~v~d~~~~~v~~~~~~g~~~-----~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~ 166 (329)
T 3fvz_A 93 PHGLSIDTDGN-YWVTDVALHQVFKLDPHSKEG-----PLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNS 166 (329)
T ss_dssp EEEEEECTTSC-EEEEETTTTEEEEECTTCSSC-----CSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSCC
T ss_pred ceEEEECCCCC-EEEEECCCCEEEEEeCCCCeE-----EEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCCC
Confidence 88999999888 788888899999999864311 11111 233446889999994445777776 689
Q ss_pred eEEEEEcCCCCCCCCeeeeec----------cCCCeeEEEecCCCCeEEEEEeCCCcEEEEECCCCCCcceEec--CCCC
Q 014454 251 YLLIWDLRTPSVSKPVQSVVA----------HQSEVNCLAFNPFNEWILATGSTDKTVKLFDLRKISTALHTFD--SHKE 318 (424)
Q Consensus 251 ~i~i~d~~~~~~~~~~~~~~~----------~~~~v~~v~~~~~~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~--~h~~ 318 (424)
.|++||.. +.. +..+.. +-.....|+++|++..++++...++.|++||..+ ++.+..+. .+..
T Consensus 167 ~I~~~~~~-g~~---~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~-G~~~~~~~~~~~~~ 241 (329)
T 3fvz_A 167 RIVQFSPS-GKF---VTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDT-KEFVREIKHASFGR 241 (329)
T ss_dssp EEEEECTT-SCE---EEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTT-CCEEEEECCTTTTT
T ss_pred eEEEEcCC-CCE---EEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCC-CcEEEEEeccccCC
Confidence 99999943 332 333321 1234889999998566888888899999999985 56666663 4567
Q ss_pred CEEEEEEcCCCCcEEEEEE-------CCCeEEEeeCCCCCcccCCCCcCCCCCeeeEEE---cCCCCCcceEEeCCCCCc
Q 014454 319 EVFQVGWNPKNETILASCC-------LGRRLMVWDLSRIDEEQTPEDAEDGPPELLFIH---GGHTSKISDFSWNPCEDW 388 (424)
Q Consensus 319 ~v~~~~~sp~~~~~l~s~~-------~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~---~~h~~~v~~~~~~~~~~~ 388 (424)
.+..++|+| + .++++.+ .+..|++|++..+ .++..+ .++...+.+++++|+|.
T Consensus 242 ~~~~~~~~p-g-~~~~~~g~~~v~~~~~~~v~~~~~~~g--------------~~~~~~~~~~~~~~~p~~ia~~~dG~- 304 (329)
T 3fvz_A 242 NVFAISYIP-G-FLFAVNGKPYFGDQEPVQGFVMNFSSG--------------EIIDVFKPVRKHFDMPHDIVASEDGT- 304 (329)
T ss_dssp CEEEEEEET-T-EEEEEECCCCTTCSCCCCEEEEETTTC--------------CEEEEECCSSSCCSSEEEEEECTTSE-
T ss_pred CcceeeecC-C-EEEEeCCCEEeccCCCcEEEEEEcCCC--------------eEEEEEcCCCCccCCeeEEEECCCCC-
Confidence 889999999 3 3343333 2448999998775 334444 35666789999999995
Q ss_pred EEEEEeCCCcEEEEecCCc
Q 014454 389 VISSVAEDNILQIWQMAEN 407 (424)
Q Consensus 389 ~l~s~~~dg~i~vw~~~~~ 407 (424)
++++...++.|++|++...
T Consensus 305 lyvad~~~~~I~~~~~~~~ 323 (329)
T 3fvz_A 305 VYIGDAHTNTVWKFTLTEK 323 (329)
T ss_dssp EEEEESSSCCEEEEEEEEC
T ss_pred EEEEECCCCEEEEEeCCcc
Confidence 8999899999999998653
No 160
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.77 E-value=5e-18 Score=171.10 Aligned_cols=240 Identities=10% Similarity=0.077 Sum_probs=158.4
Q ss_pred EEEecCCCCcEEEEEeCCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCC---ceeEEEecCCCCceEEEEeC-------
Q 014454 130 RARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHST---EGYGLSWSKFKEGHLLSGSD------- 199 (424)
Q Consensus 130 ~~~~~p~~~~~latg~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~h~~---~v~~l~~~~~~~~~l~s~~~------- 199 (424)
.++|+|++. ++++ +.|+.|++||+.+ ......+.+|.. .+.+++|+|+|+ +|++++.
T Consensus 20 ~~~~s~dg~-~~~~-~~d~~i~~~~~~~----------g~~~~~~~~~~~~~~~~~~~~~SpDg~-~la~~~~~~~~~~~ 86 (719)
T 1z68_A 20 FPNWISGQE-YLHQ-SADNNIVLYNIET----------GQSYTILSNRTMKSVNASNYGLSPDRQ-FVYLESDYSKLWRY 86 (719)
T ss_dssp CCEESSSSE-EEEE-CTTSCEEEEESSS----------CCEEEEECHHHHHTTTCSEEEECTTSS-EEEEEEEEEECSSS
T ss_pred ccEECCCCe-EEEE-cCCCCEEEEEcCC----------CcEEEEEccccccccceeeEEECCCCC-eEEEEecCceeEEe
Confidence 679999984 5655 4699999999987 233333444433 389999999998 6777765
Q ss_pred --CCcEEEEeCCCCCCCCcccceeeeecCCccEeeEEEecCCCcEEEEEeCCCeEEEEEcCCCCCCCCeeee-eccCCC-
Q 014454 200 --DAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSV-VAHQSE- 275 (424)
Q Consensus 200 --dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~dg~i~i~d~~~~~~~~~~~~~-~~~~~~- 275 (424)
++.|++||+.++..... .. ....+..++|+|+|+.++ .+ .++.|++||+.++.. .... .++...
T Consensus 87 s~~~~i~~~d~~~g~~~~~----~~---l~~~~~~~~~SPDG~~la-~~-~~~~i~~~~~~~g~~---~~l~~~~~~~~v 154 (719)
T 1z68_A 87 SYTATYYIYDLSNGEFVRG----NE---LPRPIQYLCWSPVGSKLA-YV-YQNNIYLKQRPGDPP---FQITFNGRENKI 154 (719)
T ss_dssp CEEEEEEEEETTTTEECCS----SC---CCSSBCCEEECSSTTCEE-EE-ETTEEEEESSTTSCC---EECCCCCBTTTE
T ss_pred ecceEEEEEECCCCccccc----ee---cCcccccceECCCCCEEE-EE-ECCeEEEEeCCCCCc---EEEecCCCcCCe
Confidence 78999999987632100 11 124688999999998664 55 478999999987653 2111 122221
Q ss_pred ----------------eeEEEecCCCCeEEEEEeCCC----------------------------------cEEEEECCC
Q 014454 276 ----------------VNCLAFNPFNEWILATGSTDK----------------------------------TVKLFDLRK 305 (424)
Q Consensus 276 ----------------v~~v~~~~~~~~~l~tg~~dg----------------------------------~i~iwd~~~ 305 (424)
..+++|+|+|+. ||+++.|. .|++||+.+
T Consensus 155 ~~g~~~~v~~ee~~~~~~~~~wSPDG~~-la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~ 233 (719)
T 1z68_A 155 FNGIPDWVYEEEMLATKYALWWSPNGKF-LAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTY 233 (719)
T ss_dssp EESSCCHHHHHHTTCSSCCEEECTTSSE-EEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEESSC
T ss_pred EcccccceeeeecccCcccEEECCCCCE-EEEEEECCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEECCC
Confidence 258999999995 66665442 788999987
Q ss_pred CCCcc--------eEecCCCCCEEEEEEcCCCCcEEEEEECC----CeEEEee----CCCCCcccCCCCcCCCCCeee-E
Q 014454 306 ISTAL--------HTFDSHKEEVFQVGWNPKNETILASCCLG----RRLMVWD----LSRIDEEQTPEDAEDGPPELL-F 368 (424)
Q Consensus 306 ~~~~~--------~~~~~h~~~v~~~~~sp~~~~~l~s~~~d----g~i~iwd----~~~~~~~~~~~~~~~~~~~~~-~ 368 (424)
+... ..+..|...+.+++|+|++ .++++.... ..|.+|| +.++... .++ .
T Consensus 234 -~~~~~~~~~~~~~~~~~~~~~~~~~~~SpD~-~~~~~~~~~~~~~~~l~~~d~~~~~~~g~~~-----------~~~~~ 300 (719)
T 1z68_A 234 -PAYVGPQEVPVPAMIASSDYYFSWLTWVTDE-RVCLQWLKRVQNVSVLSICDFREDWQTWDCP-----------KTQEH 300 (719)
T ss_dssp -HHHHCCEECCCCHHHHTSCEEEEEEEESSSS-EEEEEEEESSTTEEEEEEEEECSSSSSEECC-----------GGGEE
T ss_pred -CCccceeEccCCccCCCCcceEEEeEEeCCC-eEEEEEeccccCeEEEEEEcccCCCCCCceE-----------EEEec
Confidence 3332 1234578889999999997 466664432 2488888 6554321 111 1
Q ss_pred EEcCCCCCcc-----eEEeCCCCCcEEE-EEeCCC--cEEEEecCCcc
Q 014454 369 IHGGHTSKIS-----DFSWNPCEDWVIS-SVAEDN--ILQIWQMAENI 408 (424)
Q Consensus 369 ~~~~h~~~v~-----~~~~~~~~~~~l~-s~~~dg--~i~vw~~~~~~ 408 (424)
...+|...+. .+.|+|+|+.+++ +...+| .|.+|++.++.
T Consensus 301 ~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~g~~~l~~~~~~~~~ 348 (719)
T 1z68_A 301 IEESRTGWAGGFFVSTPVFSYDAISYYKIFSDKDGYKHIHYIKDTVEN 348 (719)
T ss_dssp EEECSSSCSSSSSCCCCEECTTSSCEEEEEECTTSCEEEEEESSCSTT
T ss_pred ccccCCceEccccCCccEECCCCCeEEEEEEccCCceEEEEEECCCCc
Confidence 1135666666 8899999996554 344555 46666766554
No 161
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.76 E-value=6.8e-17 Score=162.80 Aligned_cols=247 Identities=12% Similarity=0.052 Sum_probs=157.0
Q ss_pred ceeEEEecCCCCcEEEEEeC---------CCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCceeEEEecCCCCceEEEE
Q 014454 127 EVNRARYMPQNPFLIATKTV---------SAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSG 197 (424)
Q Consensus 127 ~v~~~~~~p~~~~~latg~~---------dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~ 197 (424)
.+.+++|+|+|+ .||+++. ++.|++||+.+. .......+ ...+..++|+|+|+ .|+.+
T Consensus 61 ~~~~~~~SpDg~-~la~~~~~~~~~~~s~~~~i~~~d~~~g--------~~~~~~~l---~~~~~~~~~SPDG~-~la~~ 127 (719)
T 1z68_A 61 NASNYGLSPDRQ-FVYLESDYSKLWRYSYTATYYIYDLSNG--------EFVRGNEL---PRPIQYLCWSPVGS-KLAYV 127 (719)
T ss_dssp TCSEEEECTTSS-EEEEEEEEEECSSSCEEEEEEEEETTTT--------EECCSSCC---CSSBCCEEECSSTT-CEEEE
T ss_pred ceeeEEECCCCC-eEEEEecCceeEEeecceEEEEEECCCC--------ccccceec---CcccccceECCCCC-EEEEE
Confidence 389999999997 5666655 689999999872 11000111 24688999999998 57777
Q ss_pred eCCCcEEEEeCCCCCCCCccc---ceeeeecCCcc---------EeeEEEecCCCcEEEEEeCCC---------------
Q 014454 198 SDDAQICLWDINAAPKNKSLE---AMQIFKVHEGV---------VEDVAWHLRHEYLFGSVGDDQ--------------- 250 (424)
Q Consensus 198 ~~dg~i~iwd~~~~~~~~~~~---~~~~~~~~~~~---------v~~~~~~~~~~~~~~s~~~dg--------------- 250 (424)
. ++.|++|++.++....... ....+.++... ..+++|+|+++.++ +++.|.
T Consensus 128 ~-~~~i~~~~~~~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~~wSPDG~~la-~~~~d~~~~~~~~~~~~~~~~ 205 (719)
T 1z68_A 128 Y-QNNIYLKQRPGDPPFQITFNGRENKIFNGIPDWVYEEEMLATKYALWWSPNGKFLA-YAEFNDTDIPVIAYSYYGDEQ 205 (719)
T ss_dssp E-TTEEEEESSTTSCCEECCCCCBTTTEEESSCCHHHHHHTTCSSCCEEECTTSSEEE-EEEEECTTSCEEEEEECCSSS
T ss_pred E-CCeEEEEeCCCCCcEEEecCCCcCCeEcccccceeeeecccCcccEEECCCCCEEE-EEEECCCCCceEEeeccCCCC
Confidence 5 7899999998764311000 00011222222 25899999998664 555331
Q ss_pred -------------------eEEEEEcCCCCCCC--Ce---eeeeccCCCeeEEEecCCCCeEEEEEeCC----CcEEEEE
Q 014454 251 -------------------YLLIWDLRTPSVSK--PV---QSVVAHQSEVNCLAFNPFNEWILATGSTD----KTVKLFD 302 (424)
Q Consensus 251 -------------------~i~i~d~~~~~~~~--~~---~~~~~~~~~v~~v~~~~~~~~~l~tg~~d----g~i~iwd 302 (424)
.|++||+.++.... .+ ..+..|...+.+++|+|++. ++++.... ..|.+||
T Consensus 206 ~~~~~~~~yp~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~SpD~~-~~~~~~~~~~~~~~l~~~d 284 (719)
T 1z68_A 206 YPRTINIPYPKAGAKNPVVRIFIIDTTYPAYVGPQEVPVPAMIASSDYYFSWLTWVTDER-VCLQWLKRVQNVSVLSICD 284 (719)
T ss_dssp SCEEEEEECCBTTSCCCEEEEEEEESSCHHHHCCEECCCCHHHHTSCEEEEEEEESSSSE-EEEEEEESSTTEEEEEEEE
T ss_pred CccceeecCCCCCCCCCeeEEEEEECCCCCccceeEccCCccCCCCcceEEEeEEeCCCe-EEEEEeccccCeEEEEEEc
Confidence 78899998754210 00 12235777899999999965 66664432 2488899
Q ss_pred ----CCCCCCcceEe----cCCCCCEE-----EEEEcCCCCcEEE-EEECCCe--EEEeeCCCCCcccCCCCcCCCCCee
Q 014454 303 ----LRKISTALHTF----DSHKEEVF-----QVGWNPKNETILA-SCCLGRR--LMVWDLSRIDEEQTPEDAEDGPPEL 366 (424)
Q Consensus 303 ----~~~~~~~~~~~----~~h~~~v~-----~~~~sp~~~~~l~-s~~~dg~--i~iwd~~~~~~~~~~~~~~~~~~~~ 366 (424)
+.+ ++....+ ..|...+. .++|+|+|+.+++ ++..+|. |.+||+....
T Consensus 285 ~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~g~~~l~~~~~~~~~--------------- 348 (719)
T 1z68_A 285 FREDWQT-WDCPKTQEHIEESRTGWAGGFFVSTPVFSYDAISYYKIFSDKDGYKHIHYIKDTVEN--------------- 348 (719)
T ss_dssp ECSSSSS-EECCGGGEEEEECSSSCSSSSSCCCCEECTTSSCEEEEEECTTSCEEEEEESSCSTT---------------
T ss_pred ccCCCCC-CceEEEEecccccCCceEccccCCccEECCCCCeEEEEEEccCCceEEEEEECCCCc---------------
Confidence 665 4444444 45666676 8999999986554 3445664 6666665432
Q ss_pred eEEEcCCCCCcceEEeCCCCCcEEEEEeC----CCcEEEEecCC
Q 014454 367 LFIHGGHTSKISDFSWNPCEDWVISSVAE----DNILQIWQMAE 406 (424)
Q Consensus 367 ~~~~~~h~~~v~~~~~~~~~~~~l~s~~~----dg~i~vw~~~~ 406 (424)
...+..+...+..+.+. ++..+++++.. ++..++|.+..
T Consensus 349 ~~~lt~~~~~v~~~~~~-d~~~i~~~~~~~~~~~~~~~l~~~~~ 391 (719)
T 1z68_A 349 AIQITSGKWEAINIFRV-TQDSLFYSSNEFEEYPGRRNIYRISI 391 (719)
T ss_dssp CEECSCSSSCEEEEEEE-CSSEEEEEESCGGGCTTCBEEEEEEC
T ss_pred eEecccCceEEEEEEEE-eCCEEEEEEecCCCCCceEEEEEEeC
Confidence 22333445557777777 77766666654 58899998764
No 162
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.75 E-value=2.6e-15 Score=133.47 Aligned_cols=236 Identities=15% Similarity=0.154 Sum_probs=165.2
Q ss_pred CCceeEEEecCCCCcEEEEEeCCCeEEEEeCCCCCCCCCCCCCCCCcEEEe------cCCCceeEEEec-CCCCceEEEE
Q 014454 125 DGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLR------GHSTEGYGLSWS-KFKEGHLLSG 197 (424)
Q Consensus 125 ~~~v~~~~~~p~~~~~latg~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~------~h~~~v~~l~~~-~~~~~~l~s~ 197 (424)
-..+.+++++|++. ++++...++.|++|+... .....+. ++...+.++++. +++. ++++.
T Consensus 29 ~~~p~~v~~~~~g~-l~v~~~~~~~i~~~d~~g-----------~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~-l~v~~ 95 (286)
T 1q7f_A 29 FTEPSGVAVNAQND-IIVADTNNHRIQIFDKEG-----------RFKFQFGECGKRDSQLLYPNRVAVVRNSGD-IIVTE 95 (286)
T ss_dssp BSCEEEEEECTTCC-EEEEEGGGTEEEEECTTS-----------CEEEEECCBSSSTTCBSSEEEEEEETTTTE-EEEEE
T ss_pred cCCCceEEECCCCC-EEEEECCCCEEEEECCCC-----------cEEEEecccCCCcccccCceEEEEEcCCCe-EEEEc
Confidence 35678999999886 788778889999999764 2222232 234568899995 5443 45554
Q ss_pred eC-CCcEEEEeCCCCCCCCcccceeeee-cCCccEeeEEEecCCCcEEEEEeCCCeEEEEEcCCCCCCCCeeeee--ccC
Q 014454 198 SD-DAQICLWDINAAPKNKSLEAMQIFK-VHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVV--AHQ 273 (424)
Q Consensus 198 ~~-dg~i~iwd~~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~~s~~~dg~i~i~d~~~~~~~~~~~~~~--~~~ 273 (424)
.. ++.|.+||.. +. .+..+. .+...+.++++++++. ++++...++.|.+||... . .+..+. .+.
T Consensus 96 ~~~~~~i~~~d~~-g~------~~~~~~~~~~~~~~~i~~~~~g~-l~v~~~~~~~i~~~~~~g-~---~~~~~~~~~~~ 163 (286)
T 1q7f_A 96 RSPTHQIQIYNQY-GQ------FVRKFGATILQHPRGVTVDNKGR-IIVVECKVMRVIIFDQNG-N---VLHKFGCSKHL 163 (286)
T ss_dssp CGGGCEEEEECTT-SC------EEEEECTTTCSCEEEEEECTTSC-EEEEETTTTEEEEECTTS-C---EEEEEECTTTC
T ss_pred CCCCCEEEEECCC-Cc------EEEEecCccCCCceEEEEeCCCC-EEEEECCCCEEEEEcCCC-C---EEEEeCCCCcc
Confidence 33 8899999943 32 122222 2345789999999985 776777789999999653 2 133332 344
Q ss_pred CCeeEEEecCCCCeEEEEEeCCCcEEEEECCCCCCcceEecCC--CCCEEEEEEcCCCCcEEEEEECCC-eEEEeeCCCC
Q 014454 274 SEVNCLAFNPFNEWILATGSTDKTVKLFDLRKISTALHTFDSH--KEEVFQVGWNPKNETILASCCLGR-RLMVWDLSRI 350 (424)
Q Consensus 274 ~~v~~v~~~~~~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~~h--~~~v~~~~~sp~~~~~l~s~~~dg-~i~iwd~~~~ 350 (424)
..+..+++++++. ++++...++.|++||.. +..+..+..+ ...+..+++++++. ++++...++ .|.+|+...
T Consensus 164 ~~p~~i~~~~~g~-l~v~~~~~~~i~~~~~~--g~~~~~~~~~g~~~~p~~i~~d~~G~-l~v~~~~~~~~i~~~~~~g- 238 (286)
T 1q7f_A 164 EFPNGVVVNDKQE-IFISDNRAHCVKVFNYE--GQYLRQIGGEGITNYPIGVGINSNGE-ILIADNHNNFNLTIFTQDG- 238 (286)
T ss_dssp SSEEEEEECSSSE-EEEEEGGGTEEEEEETT--CCEEEEESCTTTSCSEEEEEECTTCC-EEEEECSSSCEEEEECTTS-
T ss_pred CCcEEEEECCCCC-EEEEECCCCEEEEEcCC--CCEEEEEccCCccCCCcEEEECCCCC-EEEEeCCCCEEEEEECCCC-
Confidence 5689999999886 77787788999999975 3555566443 36789999999984 777777775 999999643
Q ss_pred CcccCCCCcCCCCCeeeEEEcCC--CCCcceEEeCCCCCcEEEEEeCCCcEEEEecCC
Q 014454 351 DEEQTPEDAEDGPPELLFIHGGH--TSKISDFSWNPCEDWVISSVAEDNILQIWQMAE 406 (424)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~~~~~h--~~~v~~~~~~~~~~~~l~s~~~dg~i~vw~~~~ 406 (424)
..+..+..+ ...+.+++++|++. ++++ +.|+.|++|++..
T Consensus 239 --------------~~~~~~~~~~~~~~~~~i~~~~~g~-l~vs-~~~~~v~v~~~~~ 280 (286)
T 1q7f_A 239 --------------QLISALESKVKHAQCFDVALMDDGS-VVLA-SKDYRLYIYRYVQ 280 (286)
T ss_dssp --------------CEEEEEEESSCCSCEEEEEEETTTE-EEEE-ETTTEEEEEECSC
T ss_pred --------------CEEEEEcccCCCCcceeEEECCCCc-EEEE-CCCCeEEEEEccc
Confidence 223333333 23467899999998 6777 5799999999865
No 163
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.75 E-value=1.6e-16 Score=147.76 Aligned_cols=250 Identities=13% Similarity=0.109 Sum_probs=158.4
Q ss_pred ccCCceeE-----EEecCCCCcEEEEEeC-CC--eEEEEeCCCCCCCCCCCCCCCCcEEEecCCCceeEEEecCCCCceE
Q 014454 123 NHDGEVNR-----ARYMPQNPFLIATKTV-SA--EVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHL 194 (424)
Q Consensus 123 ~h~~~v~~-----~~~~p~~~~~latg~~-dg--~v~iw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l 194 (424)
.|...... .+|+|+++. ||.++. +| .|.+||+.. ........++...+.++.|+|++. .|
T Consensus 28 ~~~~~~~~~~~~~~~~SpDg~~-l~~~~~~~g~~~l~~~d~~~----------g~~~~lt~~~~~~~~~~~~spdg~-~l 95 (388)
T 3pe7_A 28 PPDVTCHRNYFYQKCFTRDGSK-LLFGGAFDGPWNYYLLDLNT----------QVATQLTEGRGDNTFGGFLSPDDD-AL 95 (388)
T ss_dssp CTTSCEECCCTTSCCBCTTSCE-EEEEECTTSSCEEEEEETTT----------CEEEECCCSSCBCSSSCEECTTSS-EE
T ss_pred CCcccccchhhcCccCCCCCCE-EEEEEcCCCCceEEEEeCCC----------CceEEeeeCCCCCccceEEcCCCC-EE
Confidence 44444444 889999985 555554 67 488888776 222222334555555789999998 68
Q ss_pred EEEeCCCcEEEEeCCCCCCCCcccceeeeecCCccEeeEE--EecCCCcEEEE---------------------EeCCCe
Q 014454 195 LSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVA--WHLRHEYLFGS---------------------VGDDQY 251 (424)
Q Consensus 195 ~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~--~~~~~~~~~~s---------------------~~~dg~ 251 (424)
+.++.++.|++||+.++.. ......+...+.... +++++..+++. ...+..
T Consensus 96 ~~~~~~~~l~~~d~~~g~~------~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (388)
T 3pe7_A 96 FYVKDGRNLMRVDLATLEE------NVVYQVPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCR 169 (388)
T ss_dssp EEEETTTEEEEEETTTCCE------EEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEE
T ss_pred EEEeCCCeEEEEECCCCcc------eeeeechhhcccccceeECCCCCeeccccccCcccccccccchhhhhhccCCcce
Confidence 8888899999999987632 222333444444333 47888754322 123467
Q ss_pred EEEEEcCCCCCCCCeeeeeccCCCeeEEEecC-CCCeEEEEEeCC------CcEEEEECCCCCCcceEecCCC--CCEEE
Q 014454 252 LLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNP-FNEWILATGSTD------KTVKLFDLRKISTALHTFDSHK--EEVFQ 322 (424)
Q Consensus 252 i~i~d~~~~~~~~~~~~~~~~~~~v~~v~~~~-~~~~~l~tg~~d------g~i~iwd~~~~~~~~~~~~~h~--~~v~~ 322 (424)
|.+||+.+++ ...+..+...+..++|+| ++.. |+....+ ..|.++|+.. .....+..+. ..+..
T Consensus 170 l~~~d~~~g~----~~~l~~~~~~~~~~~~sp~dg~~-l~~~~~~~~~~~~~~l~~~d~~~--~~~~~l~~~~~~~~~~~ 242 (388)
T 3pe7_A 170 LMRVDLKTGE----STVILQENQWLGHPIYRPYDDST-VAFCHEGPHDLVDARMWLINEDG--TNMRKVKTHAEGESCTH 242 (388)
T ss_dssp EEEEETTTCC----EEEEEEESSCEEEEEEETTEEEE-EEEEECSCTTTSSCSEEEEETTS--CCCEESCCCCTTEEEEE
T ss_pred EEEEECCCCc----eEEeecCCccccccEECCCCCCE-EEEEEecCCCCCcceEEEEeCCC--CceEEeeeCCCCccccc
Confidence 9999998865 344445677899999999 8885 5554442 3788888764 3334444444 35888
Q ss_pred EEEcCCCCcEEEEEECCC----eEEEeeCCCCCcccCCCCcCCCCCeeeEEEcCCCC---CcceEEeCCCCCcEEEEE--
Q 014454 323 VGWNPKNETILASCCLGR----RLMVWDLSRIDEEQTPEDAEDGPPELLFIHGGHTS---KISDFSWNPCEDWVISSV-- 393 (424)
Q Consensus 323 ~~~sp~~~~~l~s~~~dg----~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~---~v~~~~~~~~~~~~l~s~-- 393 (424)
++|+|+|+.+++++..++ .|.+||+..+.. ..+....++.. ....++|+|+|+.++++.
T Consensus 243 ~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~------------~~l~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~ 310 (388)
T 3pe7_A 243 EFWVPDGSALVYVSYLKGSPDRFIYSADPETLEN------------RQLTSMPACSHLMSNYDGSLMVGDGSDAPVDVQD 310 (388)
T ss_dssp EEECTTSSCEEEEEEETTCCCEEEEEECTTTCCE------------EEEEEECCEEEEEECTTSSEEEEEECCC------
T ss_pred ceECCCCCEEEEEecCCCCCcceEEEEecCCCce------------EEEEcCCCceeeeecCCCCeEccCCCcceeEeee
Confidence 999999986555444333 399999987542 22333333110 123357999999655443
Q ss_pred ------eCCCcEEEEecCCccC
Q 014454 394 ------AEDNILQIWQMAENIY 409 (424)
Q Consensus 394 ------~~dg~i~vw~~~~~~~ 409 (424)
..+..|++|++.++..
T Consensus 311 ~~~~~~~~~~~i~~~d~~~~~~ 332 (388)
T 3pe7_A 311 DSGYKIENDPFLYVFNMKNGTQ 332 (388)
T ss_dssp ------CCCCEEEEEETTTTEE
T ss_pred ccccccCCCCEEEEEeccCCce
Confidence 4567899999988654
No 164
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.74 E-value=4.4e-16 Score=157.25 Aligned_cols=246 Identities=11% Similarity=0.095 Sum_probs=160.1
Q ss_pred ceeEEEecCCCCcEEEEEeCCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCc-----eeEEEecCCCCceEEEEeCC-
Q 014454 127 EVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTE-----GYGLSWSKFKEGHLLSGSDD- 200 (424)
Q Consensus 127 ~v~~~~~~p~~~~~latg~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~h~~~-----v~~l~~~~~~~~~l~s~~~d- 200 (424)
....++|+|++. +++++ ||.|++||+.+ ......+.+|... ...++|||+++ +|+.++.+
T Consensus 18 ~~~~~~w~~dg~-~~~~~--~~~i~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~Spdg~-~l~~~~~~~ 83 (740)
T 4a5s_A 18 KLYSLRWISDHE-YLYKQ--ENNILVFNAEY----------GNSSVFLENSTFDEFGHSINDYSISPDGQ-FILLEYNYV 83 (740)
T ss_dssp CCCCEEECSSSE-EEEEE--TTEEEEEETTT----------CCEEEEECTTTTTTCCSCCCEEEECTTSS-EEEEEEEEE
T ss_pred cccccEECCCCc-EEEEc--CCcEEEEECCC----------CceEEEEechhhhhhcccccceEECCCCC-EEEEEECCe
Confidence 456799999985 77775 89999999987 2334445666533 23478899998 67777765
Q ss_pred --------CcEEEEeCCCCCCCCcccceeeeecCCccEeeEEEecCCCcEEEEEeCCCeEEEEEcCCCCCCCCeeeeecc
Q 014454 201 --------AQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAH 272 (424)
Q Consensus 201 --------g~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~dg~i~i~d~~~~~~~~~~~~~~~~ 272 (424)
+.+.+||+.+++. ..+..|...+...+|+|+|+.+. .+ .++.|++||+.++.... + +..++
T Consensus 84 ~~~r~~~~~~~~~~d~~~~~~-------~~l~~~~~~~~~~~~SPdG~~la-~~-~~~~i~~~~~~~~~~~~-l-t~~g~ 152 (740)
T 4a5s_A 84 KQWRHSYTASYDIYDLNKRQL-------ITEERIPNNTQWVTWSPVGHKLA-YV-WNNDIYVKIEPNLPSYR-I-TWTGK 152 (740)
T ss_dssp ECSSSCEEEEEEEEETTTTEE-------CCSSCCCTTEEEEEECSSTTCEE-EE-ETTEEEEESSTTSCCEE-C-CSCCB
T ss_pred eeEEEccceEEEEEECCCCcE-------EEcccCCCcceeeEECCCCCEEE-EE-ECCeEEEEECCCCceEE-E-cCCCC
Confidence 5677999987632 22445677899999999998664 44 57899999998765311 1 11122
Q ss_pred CC-----------------CeeEEEecCCCCeEEEEEeCC-C-----------------------------------cEE
Q 014454 273 QS-----------------EVNCLAFNPFNEWILATGSTD-K-----------------------------------TVK 299 (424)
Q Consensus 273 ~~-----------------~v~~v~~~~~~~~~l~tg~~d-g-----------------------------------~i~ 299 (424)
.. ....+.|+|+|+. ||.++.| + .|+
T Consensus 153 ~~~~~~g~~~~v~~ee~~~~~~~~~wSpDg~~-la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~~~l~ 231 (740)
T 4a5s_A 153 EDIIYNGITDWVYEEEVFSAYSALWWSPNGTF-LAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFF 231 (740)
T ss_dssp TTTEEESBCCHHHHHHTSSSSBCEEECTTSSE-EEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEEEE
T ss_pred ccceecCcccccccchhcCCCcceEECCCCCE-EEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcCcCCeeEEE
Confidence 22 2245899999995 5555422 1 478
Q ss_pred EEECCC---CCC-cceEec------CCCCCEEEEEEcCCCCcEEEEE-EC---CCeEEEeeCCCCC----cccCCCCcCC
Q 014454 300 LFDLRK---IST-ALHTFD------SHKEEVFQVGWNPKNETILASC-CL---GRRLMVWDLSRID----EEQTPEDAED 361 (424)
Q Consensus 300 iwd~~~---~~~-~~~~~~------~h~~~v~~~~~sp~~~~~l~s~-~~---dg~i~iwd~~~~~----~~~~~~~~~~ 361 (424)
+||+.+ ... ....+. .|...+..++|+|+++ +++.. .. +..|.+||+.++. +...
T Consensus 232 v~d~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~wspdg~-~~~~~~~r~~~~~~i~~~d~~tg~~~~~~~~~------ 304 (740)
T 4a5s_A 232 VVNTDSLSSVTNATSIQITAPASMLIGDHYLCDVTWATQER-ISLQWLRRIQNYSVMDICDYDESSGRWNCLVA------ 304 (740)
T ss_dssp EEETTSCCSSSCCCEEEECCCHHHHTSCEEEEEEEEEETTE-EEEEEEESSTTEEEEEEEEEETTTTEEEECGG------
T ss_pred EEECCCCCCCCcceEEEecCCccCCCCCeEEEEEEEeCCCe-EEEEEeCCCCCEEEEEEEECCCCccccceeEE------
Confidence 888876 321 223333 2677899999999996 44443 32 2369999998764 1110
Q ss_pred CCCeeeEEEcCCCCCcc-----eEEeCCCCCcEEEEEe-CCC--cEEEEecCCccC
Q 014454 362 GPPELLFIHGGHTSKIS-----DFSWNPCEDWVISSVA-EDN--ILQIWQMAENIY 409 (424)
Q Consensus 362 ~~~~~~~~~~~h~~~v~-----~~~~~~~~~~~l~s~~-~dg--~i~vw~~~~~~~ 409 (424)
. .....+|...|. ...|+|+|+.+++..+ .+| .|++|++.++..
T Consensus 305 ---~-~l~~~~~~~~v~~~~~~~p~fspDG~~l~~~~s~~~G~~~l~~~~~~~~~~ 356 (740)
T 4a5s_A 305 ---R-QHIEMSTTGWVGRFRPSEPHFTLDGNSFYKIISNEEGYRHICYFQIDKKDC 356 (740)
T ss_dssp ---G-CEEEECSSSCSSSSSCCCCEECTTSSEEEEEEECTTSCEEEEEEETTCSSC
T ss_pred ---E-EeeeccCCceEccCcCCCceEcCCCCEEEEEEEcCCCceEEEEEECCCCce
Confidence 1 111134555554 7899999996552444 444 577788776543
No 165
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.72 E-value=1.2e-15 Score=139.39 Aligned_cols=196 Identities=12% Similarity=0.116 Sum_probs=138.4
Q ss_pred ceeEEEecCCCCcEEEEEeCCCeEEEEeCCCCCCCCCCCCCCCCcEEEecC------CCceeEEEecCCCCceEEEEeCC
Q 014454 127 EVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGH------STEGYGLSWSKFKEGHLLSGSDD 200 (424)
Q Consensus 127 ~v~~~~~~p~~~~~latg~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~h------~~~v~~l~~~~~~~~~l~s~~~d 200 (424)
.+..++|+|+++.+++++..++.|.+||+.+ ......+..+ ...+.+++|+|+++ +|++++.+
T Consensus 44 ~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t----------~~~~~~~~~~~~~~~~~~~~~~~~~spdg~-~l~~~~~~ 112 (349)
T 1jmx_B 44 GPGTAMMAPDNRTAYVLNNHYGDIYGIDLDT----------CKNTFHANLSSVPGEVGRSMYSFAISPDGK-EVYATVNP 112 (349)
T ss_dssp SSCEEEECTTSSEEEEEETTTTEEEEEETTT----------TEEEEEEESCCSTTEEEECSSCEEECTTSS-EEEEEEEE
T ss_pred CCceeEECCCCCEEEEEeCCCCcEEEEeCCC----------CcEEEEEEcccccccccccccceEECCCCC-EEEEEccc
Confidence 6889999999976677777889999999976 2333334322 22378899999998 67777754
Q ss_pred ------------CcEEEEeCCCCCCCCcccceeeeecCCccEeeEEEecCCCcEEEEEeCCCeEEEEEcCCCCCCCCeee
Q 014454 201 ------------AQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQS 268 (424)
Q Consensus 201 ------------g~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~dg~i~i~d~~~~~~~~~~~~ 268 (424)
+.|.+||+.++.... .+.... +...+.+++|+|++. +++ ++ +.|.+||+.+++. +..
T Consensus 113 ~~~~~~~~~~~~~~i~~~d~~~~~~~~---~~~~~~-~~~~~~~~~~s~dg~-l~~-~~--~~i~~~d~~~~~~---~~~ 181 (349)
T 1jmx_B 113 TQRLNDHYVVKPPRLEVFSTADGLEAK---PVRTFP-MPRQVYLMRAADDGS-LYV-AG--PDIYKMDVKTGKY---TVA 181 (349)
T ss_dssp EEECSSCEEECCCEEEEEEGGGGGGBC---CSEEEE-CCSSCCCEEECTTSC-EEE-ES--SSEEEECTTTCCE---EEE
T ss_pred ccccccccccCCCeEEEEECCCccccc---eeeecc-CCCcccceeECCCCc-EEE-cc--CcEEEEeCCCCce---ecc
Confidence 899999998643211 122232 344688999999998 664 43 3499999987653 211
Q ss_pred eecc--------------------------------------------------------------------CCCeeEEE
Q 014454 269 VVAH--------------------------------------------------------------------QSEVNCLA 280 (424)
Q Consensus 269 ~~~~--------------------------------------------------------------------~~~v~~v~ 280 (424)
+..+ ...+.+++
T Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (349)
T 1jmx_B 182 LPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVDLKTGKTHTQEFADLTELYFTGL 261 (349)
T ss_dssp ECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CCCEEEEEEEEEETTTCCEEEEEEEECSSCEEEEE
T ss_pred ccccccCCccccCccceeeecCCCcceeEEeeeeeeecCCCcCCccccccceeEEEEeccCCcEEecccccCCCcceeeE
Confidence 1111 12456778
Q ss_pred ecC-CCCeEEEEEeCCCcEEEEECCCCCCcceEecCCCCCEEEEEEcCCCCcEEEEEECCCeEEEeeCCCC
Q 014454 281 FNP-FNEWILATGSTDKTVKLFDLRKISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRI 350 (424)
Q Consensus 281 ~~~-~~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~l~s~~~dg~i~iwd~~~~ 350 (424)
|+| ++.. ++++ ++.|.+||+.+ ++.+..+.. ...+.+++|+|+++. |++++.++.|.+||+.+.
T Consensus 262 ~sp~dg~~-l~~~--~~~v~~~d~~~-~~~~~~~~~-~~~~~~~~~s~dg~~-l~~~~~~~~v~v~d~~~~ 326 (349)
T 1jmx_B 262 RSPKDPNQ-IYGV--LNRLAKYDLKQ-RKLIKAANL-DHTYYCVAFDKKGDK-LYLGGTFNDLAVFNPDTL 326 (349)
T ss_dssp ECSSCTTE-EEEE--ESEEEEEETTT-TEEEEEEEC-SSCCCEEEECSSSSC-EEEESBSSEEEEEETTTT
T ss_pred ecCCCCCE-EEEE--cCeEEEEECcc-CeEEEEEcC-CCCccceEECCCCCE-EEEecCCCeEEEEecccc
Confidence 889 8885 5555 88999999987 566666653 346789999999975 555778899999999875
No 166
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.71 E-value=7.9e-16 Score=143.03 Aligned_cols=243 Identities=7% Similarity=0.007 Sum_probs=152.9
Q ss_pred cCCceeEEEecCCCCcEEEEEeCCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCceeEEEe--cCCCCceEEE-----
Q 014454 124 HDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSW--SKFKEGHLLS----- 196 (424)
Q Consensus 124 h~~~v~~~~~~p~~~~~latg~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~--~~~~~~~l~s----- 196 (424)
|...+..++|+|+++ .|+.++.++.|++||+.+ ......+..+...+....| +|++. +++.
T Consensus 79 ~~~~~~~~~~spdg~-~l~~~~~~~~l~~~d~~~----------g~~~~~~~~~~~~~~~~~~~~~~dg~-~l~~~~~~~ 146 (388)
T 3pe7_A 79 RGDNTFGGFLSPDDD-ALFYVKDGRNLMRVDLAT----------LEENVVYQVPAEWVGYGTWVANSDCT-KLVGIEIRR 146 (388)
T ss_dssp SCBCSSSCEECTTSS-EEEEEETTTEEEEEETTT----------CCEEEEEECCTTEEEEEEEEECTTSS-EEEEEEEEG
T ss_pred CCCCccceEEcCCCC-EEEEEeCCCeEEEEECCC----------CcceeeeechhhcccccceeECCCCC-eeccccccC
Confidence 334445678999997 677778889999999987 2333334445554544444 78777 4553
Q ss_pred -----------------EeCCCcEEEEeCCCCCCCCcccceeeeecCCccEeeEEEec-CCCcEEEEEeC------CCeE
Q 014454 197 -----------------GSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHL-RHEYLFGSVGD------DQYL 252 (424)
Q Consensus 197 -----------------~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~~~s~~~------dg~i 252 (424)
...+..|.+||+.++. ...+..+...+..++|+| ++..++ .+.. ...|
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~-------~~~l~~~~~~~~~~~~sp~dg~~l~-~~~~~~~~~~~~~l 218 (388)
T 3pe7_A 147 EDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTGE-------STVILQENQWLGHPIYRPYDDSTVA-FCHEGPHDLVDARM 218 (388)
T ss_dssp GGCCCCCSHHHHHHHGGGCCCEEEEEEETTTCC-------EEEEEEESSCEEEEEEETTEEEEEE-EEECSCTTTSSCSE
T ss_pred cccccccccchhhhhhccCCcceEEEEECCCCc-------eEEeecCCccccccEECCCCCCEEE-EEEecCCCCCcceE
Confidence 2245789999998763 223334566789999999 887554 4443 3378
Q ss_pred EEEEcCCCCCCCCeeeeeccC--CCeeEEEecCCCCeEEEEEeCCC----cEEEEECCCCCC-cceEecCCCCC---EEE
Q 014454 253 LIWDLRTPSVSKPVQSVVAHQ--SEVNCLAFNPFNEWILATGSTDK----TVKLFDLRKIST-ALHTFDSHKEE---VFQ 322 (424)
Q Consensus 253 ~i~d~~~~~~~~~~~~~~~~~--~~v~~v~~~~~~~~~l~tg~~dg----~i~iwd~~~~~~-~~~~~~~h~~~---v~~ 322 (424)
.++|+.... ...+..+. ..+..++|+|+|+.+++++..++ .|++||+.+... .+..+..+... ...
T Consensus 219 ~~~d~~~~~----~~~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~ 294 (388)
T 3pe7_A 219 WLINEDGTN----MRKVKTHAEGESCTHEFWVPDGSALVYVSYLKGSPDRFIYSADPETLENRQLTSMPACSHLMSNYDG 294 (388)
T ss_dssp EEEETTSCC----CEESCCCCTTEEEEEEEECTTSSCEEEEEEETTCCCEEEEEECTTTCCEEEEEEECCEEEEEECTTS
T ss_pred EEEeCCCCc----eEEeeeCCCCcccccceECCCCCEEEEEecCCCCCcceEEEEecCCCceEEEEcCCCceeeeecCCC
Confidence 888876644 23333333 25778899999997545444333 399999987321 22233221000 122
Q ss_pred EEEcCCCCcEEEEE--------ECCCeEEEeeCCCCCcccCCCCcCCCCCeeeEEEcCCCC-----------CcceEEeC
Q 014454 323 VGWNPKNETILASC--------CLGRRLMVWDLSRIDEEQTPEDAEDGPPELLFIHGGHTS-----------KISDFSWN 383 (424)
Q Consensus 323 ~~~sp~~~~~l~s~--------~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~-----------~v~~~~~~ 383 (424)
++|+|+|+.++++. ..+..|.+||+..+. +..+..|.. .+..++|+
T Consensus 295 ~~~spdg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~---------------~~~l~~~~~~~~~~~~~~~~~~~~~~~s 359 (388)
T 3pe7_A 295 SLMVGDGSDAPVDVQDDSGYKIENDPFLYVFNMKNGT---------------QHRVARHDTSWKVFEGDRQVTHPHPSFT 359 (388)
T ss_dssp SEEEEEECCC------------CCCCEEEEEETTTTE---------------EEEEEECCCCCCCBTTBSSTTCCCCEEC
T ss_pred CeEccCCCcceeEeeeccccccCCCCEEEEEeccCCc---------------eEEeccccCcccccccccccCCCCccCC
Confidence 37999998655443 456689999998642 222333333 47889999
Q ss_pred CCCCcEEEEEeCCCcEEEEecC
Q 014454 384 PCEDWVISSVAEDNILQIWQMA 405 (424)
Q Consensus 384 ~~~~~~l~s~~~dg~i~vw~~~ 405 (424)
|+|+.+++++..+|...||.+.
T Consensus 360 pDg~~l~~~s~~~g~~~l~~~~ 381 (388)
T 3pe7_A 360 PDDKQILFTSDVHGKPALYLAT 381 (388)
T ss_dssp TTSSEEEEEECTTSSCEEEEEE
T ss_pred CCCCEEEEEecCCCceeEEEEE
Confidence 9999766677678888887654
No 167
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.71 E-value=8.6e-16 Score=153.28 Aligned_cols=247 Identities=8% Similarity=-0.005 Sum_probs=163.3
Q ss_pred EeccCCceeEEEecCCCCcEEEEE--eCCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCcee---------EEEec--
Q 014454 121 QINHDGEVNRARYMPQNPFLIATK--TVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGY---------GLSWS-- 187 (424)
Q Consensus 121 ~~~h~~~v~~~~~~p~~~~~latg--~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~---------~l~~~-- 187 (424)
...|...+..++|+++. .+++.. +.++...||.... ......+..|...+. ...|+
T Consensus 19 ~~~~~~~~~~~~~s~~~-~~~~~~~~~~~~~~~l~~~~~----------~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~S 87 (662)
T 3azo_A 19 VASRSGRPACVGAVGDE-VWWVAPRPAEAGRATLVRRRA----------DGAEESALPAPWNVRNRVFEYSGFPWAGVPR 87 (662)
T ss_dssp HHHTCSCCEEEEEETTE-EEEEEEETTTTTEEEEEEECT----------TSCEEESSCTTCCBCCCGGGTCCCCEEEECC
T ss_pred HhhcCCccceeEEcCCe-EEEEecCcccCCcEEEEEECC----------CCCcceeCCCCccccccccccCCccceeeee
Confidence 34688999999999864 355655 4578999999633 122344555655555 56666
Q ss_pred CCCCc-eEEEEeCCCcEEEEeCC--C-CCCCCcccceeeeec-----CCccEeeEEEecCCCcEEEEEeCC---------
Q 014454 188 KFKEG-HLLSGSDDAQICLWDIN--A-APKNKSLEAMQIFKV-----HEGVVEDVAWHLRHEYLFGSVGDD--------- 249 (424)
Q Consensus 188 ~~~~~-~l~s~~~dg~i~iwd~~--~-~~~~~~~~~~~~~~~-----~~~~v~~~~~~~~~~~~~~s~~~d--------- 249 (424)
|++.. ++++...+..|.++++. . +. . ..+.. |...+.+++|+|+++.++ +++.+
T Consensus 88 PDg~~~la~~~~~~~~l~~~~~~~~g~~~-~------~~l~~~~~~~~~~~~~~~~~spDg~~l~-~~~~~~~~~~~~~~ 159 (662)
T 3azo_A 88 PAGGPLLVFTHFGDQRLYAFEPDAPGGAV-P------RPLTPVSAVGGGLRWADPVLLPERGEVW-CMAEEFTGEGPSDV 159 (662)
T ss_dssp SSSSCEEEEEBTTTCCEEEECTTSTTCCC-C------EECSCCCCSTTCEEEEEEEEETTTTEEE-EEEEEECSSSTTCE
T ss_pred cCCCeEEEEEECCCCeEEEEcCCCCCCCC-C------EeccCCccCCCCccccCcEECCCCCEEE-EEEecccCCCCCCc
Confidence 98884 33343346677777765 2 21 1 12222 567889999999998665 55554
Q ss_pred -CeEEEEEcCC------CCCCCCeeeee-ccCCCeeEEEecCCCCeEEEEEeCC--------CcEEEEECCCCC---Ccc
Q 014454 250 -QYLLIWDLRT------PSVSKPVQSVV-AHQSEVNCLAFNPFNEWILATGSTD--------KTVKLFDLRKIS---TAL 310 (424)
Q Consensus 250 -g~i~i~d~~~------~~~~~~~~~~~-~~~~~v~~v~~~~~~~~~l~tg~~d--------g~i~iwd~~~~~---~~~ 310 (424)
..|++||+.+ +. ...+. .+...+..++|+|+|+. |+.++.+ ..|.+||+...+ ...
T Consensus 160 ~~~i~~~~~~~~~~~~~~~----~~~l~~~~~~~~~~~~~SpDG~~-la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~ 234 (662)
T 3azo_A 160 RRFLAAVPLDGSAAADRSA----VRELSDDAHRFVTGPRLSPDGRQ-AVWLAWDHPRMPWEGTELKTARVTEDGRFADTR 234 (662)
T ss_dssp EEEEEEEETTSTTTTCGGG----SEESSCSCSSEECCCEECTTSSE-EEEEEECTTCCTTTCEEEEEEEECTTSCEEEEE
T ss_pred eeEEEEEECCCCccccCCc----eeEEEecCCCcccCceECCCCCE-EEEEECCCCCCCCCCcEEEEEEECCCCcccccE
Confidence 5899999987 33 23444 45567888999999996 5555433 379999998324 333
Q ss_pred eEecCCCCCEEEEEEcCCCCcEEEEEECCC--eEEEeeCCCCCcccCCCCcCCCCCeeeEEEcCCCC--------CcceE
Q 014454 311 HTFDSHKEEVFQVGWNPKNETILASCCLGR--RLMVWDLSRIDEEQTPEDAEDGPPELLFIHGGHTS--------KISDF 380 (424)
Q Consensus 311 ~~~~~h~~~v~~~~~sp~~~~~l~s~~~dg--~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~--------~v~~~ 380 (424)
.....|...+..++|+|+|+ +++++..++ .|.+||+..+.... ...++.. .+..+
T Consensus 235 ~l~~~~~~~~~~~~~spdg~-l~~~~~~~~~~~l~~~~~~~~~~~~--------------l~~~~~~~~~p~w~~~~~~~ 299 (662)
T 3azo_A 235 TLLGGPEEAIAQAEWAPDGS-LIVATDRTGWWNLHRVDPATGAATQ--------------LCRREEEFAGPLWTPGMRWF 299 (662)
T ss_dssp EEEEETTBCEEEEEECTTSC-EEEEECTTSSCEEEEECTTTCCEEE--------------SSCCSSBSSCCCCSTTCCSE
T ss_pred EeCCCCCceEcceEECCCCe-EEEEECCCCCeEEEEEECCCCceee--------------cccccccccCccccccCceE
Confidence 44445678899999999997 888888888 56666654432111 1111111 15678
Q ss_pred EeCCCCCcEEEEEeCCCcEEEE--ecCCcc
Q 014454 381 SWNPCEDWVISSVAEDNILQIW--QMAENI 408 (424)
Q Consensus 381 ~~~~~~~~~l~s~~~dg~i~vw--~~~~~~ 408 (424)
+|+|++. ++++++. +.++|| ++.++.
T Consensus 300 ~~~~~~~-~~~~~~~-~~~~l~~~d~~~~~ 327 (662)
T 3azo_A 300 APLANGL-IAVVHGK-GAAVLGILDPESGE 327 (662)
T ss_dssp EECTTSC-EEEEEBS-SSCEEEEEETTTTE
T ss_pred eEeCCCE-EEEEEEc-CccEEEEEECCCCc
Confidence 9999988 7888888 999999 554443
No 168
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.70 E-value=3.4e-14 Score=127.00 Aligned_cols=244 Identities=11% Similarity=0.038 Sum_probs=168.7
Q ss_pred ccCCceeEEEecCCCCcEEEEEeCCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCceeEEEecCCCCceEEEEeCCCc
Q 014454 123 NHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDDAQ 202 (424)
Q Consensus 123 ~h~~~v~~~~~~p~~~~~latg~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~ 202 (424)
.+.....+++|+|++..+++++..++.|+.|+... . ...+..+...+.++++++++. ++++...++.
T Consensus 25 ~~~~~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~-----------~-~~~~~~~~~~~~~l~~~~dg~-l~v~~~~~~~ 91 (296)
T 3e5z_A 25 DGFTWTEGPVYVPARSAVIFSDVRQNRTWAWSDDG-----------Q-LSPEMHPSHHQNGHCLNKQGH-LIACSHGLRR 91 (296)
T ss_dssp CCCSSEEEEEEEGGGTEEEEEEGGGTEEEEEETTS-----------C-EEEEESSCSSEEEEEECTTCC-EEEEETTTTE
T ss_pred cCCccccCCeEeCCCCEEEEEeCCCCEEEEEECCC-----------C-eEEEECCCCCcceeeECCCCc-EEEEecCCCe
Confidence 45667889999999876888889999999999876 2 455666777899999999887 6666666789
Q ss_pred EEEEeCCCCCCCCcccceeeee-cCCccEeeEEEecCCCcEEEEE----e-------------CCCeEEEEEcCCCCCCC
Q 014454 203 ICLWDINAAPKNKSLEAMQIFK-VHEGVVEDVAWHLRHEYLFGSV----G-------------DDQYLLIWDLRTPSVSK 264 (424)
Q Consensus 203 i~iwd~~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~~s~----~-------------~dg~i~i~d~~~~~~~~ 264 (424)
|.+||..++.... + ..... .....+++++++|++. ++++. + ..+.|..++.. +.
T Consensus 92 i~~~d~~~g~~~~-~--~~~~~~~~~~~~~~i~~d~~G~-l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~--- 163 (296)
T 3e5z_A 92 LERQREPGGEWES-I--ADSFEGKKLNSPNDVCLAPDGS-LWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GT--- 163 (296)
T ss_dssp EEEECSTTCCEEE-E--ECEETTEECCCCCCEEECTTSC-EEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SC---
T ss_pred EEEEcCCCCcEEE-E--eeccCCCCCCCCCCEEECCCCC-EEEECCccccccccccccccccCCCcEEEEECCC-CC---
Confidence 9999986653210 0 00111 1123567899999986 55552 2 13456555554 22
Q ss_pred CeeeeeccCCCeeEEEecCCCCeEEEEEeCCCcEEEEECCCCCCc---ceEecCCCCCEEEEEEcCCCCcEEEEEECCCe
Q 014454 265 PVQSVVAHQSEVNCLAFNPFNEWILATGSTDKTVKLFDLRKISTA---LHTFDSHKEEVFQVGWNPKNETILASCCLGRR 341 (424)
Q Consensus 265 ~~~~~~~~~~~v~~v~~~~~~~~~l~tg~~dg~i~iwd~~~~~~~---~~~~~~h~~~v~~~~~sp~~~~~l~s~~~dg~ 341 (424)
+..+..+......++|+|++.. +++.+.++.|.+||+...+.. ...+..+...+.+++++++|. ++++. ++.
T Consensus 164 -~~~~~~~~~~~~gi~~s~dg~~-lv~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~p~~i~~d~~G~-l~v~~--~~~ 238 (296)
T 3e5z_A 164 -LSAPIRDRVKPNGLAFLPSGNL-LVSDTGDNATHRYCLNARGETEYQGVHFTVEPGKTDGLRVDAGGL-IWASA--GDG 238 (296)
T ss_dssp -EEEEECCCSSEEEEEECTTSCE-EEEETTTTEEEEEEECSSSCEEEEEEEECCSSSCCCSEEEBTTSC-EEEEE--TTE
T ss_pred -EEEeecCCCCCccEEECCCCCE-EEEeCCCCeEEEEEECCCCcCcCCCeEeeCCCCCCCeEEECCCCC-EEEEc--CCe
Confidence 4444556667899999999985 488888899999999732333 223333456678899999995 55555 788
Q ss_pred EEEeeCCCCCcccCCCCcCCCCCeeeEEEcCCCCCcceEEe-CCCCCcEEEEEeCCCcEEEEecCCccCC
Q 014454 342 LMVWDLSRIDEEQTPEDAEDGPPELLFIHGGHTSKISDFSW-NPCEDWVISSVAEDNILQIWQMAENIYH 410 (424)
Q Consensus 342 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~-~~~~~~~l~s~~~dg~i~vw~~~~~~~~ 410 (424)
|.+|+... ..+..+..+.. +.+++| .|+++. |+.++.+ .+.-+++.+..++
T Consensus 239 v~~~~~~g---------------~~~~~~~~~~~-~~~~~f~~~d~~~-L~v~t~~-~l~~~~~~~~~~~ 290 (296)
T 3e5z_A 239 VHVLTPDG---------------DELGRVLTPQT-TSNLCFGGPEGRT-LYMTVST-EFWSIETNVRGLE 290 (296)
T ss_dssp EEEECTTS---------------CEEEEEECSSC-CCEEEEESTTSCE-EEEEETT-EEEEEECSCCBCC
T ss_pred EEEECCCC---------------CEEEEEECCCC-ceeEEEECCCCCE-EEEEcCC-eEEEEEccccccc
Confidence 99999763 44555666666 899999 688884 5555555 4555666666554
No 169
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.70 E-value=4.7e-15 Score=136.80 Aligned_cols=209 Identities=11% Similarity=0.076 Sum_probs=136.2
Q ss_pred CceeEEEecCCCCc-EEEEEe-------------CCCeEEEEeCCCCCCCCCCCCCCCCcEEEe----cCCCceeEEEec
Q 014454 126 GEVNRARYMPQNPF-LIATKT-------------VSAEVYVFDYSKHPSKPPLDGACSPDLRLR----GHSTEGYGLSWS 187 (424)
Q Consensus 126 ~~v~~~~~~p~~~~-~latg~-------------~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~----~h~~~v~~l~~~ 187 (424)
+.+.+++|+|+++. +++++. .+|.+.+|++... ......+. .+...+.+++|+
T Consensus 83 g~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~~~---------g~~~~~~~~~~~~~~~~~~~~~~s 153 (365)
T 1jof_A 83 GHPRANDADTNTRAIFLLAAKQPPYAVYANPFYKFAGYGNVFSVSET---------GKLEKNVQNYEYQENTGIHGMVFD 153 (365)
T ss_dssp SSGGGGCTTSCCEEEEEEECSSTTCCEEEEEESSSCCEEEEEEECTT---------CCEEEEEEEEECCTTCCEEEEEEC
T ss_pred CCCccEEECCCCCEEEEEEecCCcceeccceeecCCceEEEEccCCC---------CcCcceEeeEEeCCCCcceEEEEC
Confidence 34667999999974 344543 6899999999741 11112222 245678999999
Q ss_pred CCCCceEEEEe-CCCcEEEEeCC-CCCCCCcccceeeee--cCCccEeeEEEecCCCcEEEEEeCCCeEEEEEcCC--CC
Q 014454 188 KFKEGHLLSGS-DDAQICLWDIN-AAPKNKSLEAMQIFK--VHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRT--PS 261 (424)
Q Consensus 188 ~~~~~~l~s~~-~dg~i~iwd~~-~~~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~~~~s~~~dg~i~i~d~~~--~~ 261 (424)
|+++ +|+++. .++.|.+|++. +++ +..+..+. .|...+..++|+|+++.++++...++.|.+|++.. ++
T Consensus 154 pdG~-~l~~~~~~~~~v~~~~~~~~g~----~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~ 228 (365)
T 1jof_A 154 PTET-YLYSADLTANKLWTHRKLASGE----VELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAGNRICEYVIDPATHM 228 (365)
T ss_dssp TTSS-EEEEEETTTTEEEEEEECTTSC----EEEEEEEECSSTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTTCC
T ss_pred CCCC-EEEEEcCCCCEEEEEEECCCCC----EEEeeeEecCCCCCCCCEeEECCCCCEEEEEECCCCeEEEEEEeCCCCc
Confidence 9998 566655 46899999997 432 12222232 23567899999999987765555688999998763 32
Q ss_pred CCC---Ceeeee----ccCC------CeeEEE-ecCCCCeEEEEEeCCC-----cEEEEECCCCCCcce---EecCCCCC
Q 014454 262 VSK---PVQSVV----AHQS------EVNCLA-FNPFNEWILATGSTDK-----TVKLFDLRKISTALH---TFDSHKEE 319 (424)
Q Consensus 262 ~~~---~~~~~~----~~~~------~v~~v~-~~~~~~~~l~tg~~dg-----~i~iwd~~~~~~~~~---~~~~h~~~ 319 (424)
... .+..+. +|.. .+..++ |+|+|++++++...+. .|.+|++...+.... ....+...
T Consensus 229 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~~~~~~~~~~~i~v~~~~~~g~~~~~~~~~~~~~~~ 308 (365)
T 1jof_A 229 PVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFASSRANKFELQGYIAGFKLRDCGSIEKQLFLSPTPTSG 308 (365)
T ss_dssp EEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEECTTSCEEEEEEEEECSSCC
T ss_pred EEEccceEEcCCCCcCCcccccccccccccEEEECCCCCEEEEECCCCCCCCCCeEEEEEECCCCCEEEeeeeeecCCCC
Confidence 100 011111 1122 478999 9999996544443333 899999963244332 23334556
Q ss_pred EEEEEEcC---CCCcEEEEEEC-CCeEEEeeCCC
Q 014454 320 VFQVGWNP---KNETILASCCL-GRRLMVWDLSR 349 (424)
Q Consensus 320 v~~~~~sp---~~~~~l~s~~~-dg~i~iwd~~~ 349 (424)
+..++|+| +++ +|++++. ++.|.+|++..
T Consensus 309 ~~~~a~sp~~~dg~-~l~v~~~~~~~v~v~~~~~ 341 (365)
T 1jof_A 309 GHSNAVSPCPWSDE-WMAITDDQEGWLEIYRWKD 341 (365)
T ss_dssp TTCCCEEECTTCTT-EEEEECSSSCEEEEEEEET
T ss_pred cccceecCCCcCCC-EEEEEEcCCCeEEEEEEch
Confidence 77899999 786 5666665 58999999865
No 170
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.69 E-value=2.5e-13 Score=123.42 Aligned_cols=236 Identities=9% Similarity=0.043 Sum_probs=157.3
Q ss_pred eccCCceeEEEecCCCCcEEEEEeCCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCceeEEEecCCCCceEEEEeCC-
Q 014454 122 INHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDD- 200 (424)
Q Consensus 122 ~~h~~~v~~~~~~p~~~~~latg~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~d- 200 (424)
..+...+.+++|+|++. +++++..++.|++||... .........+...+.+++|++++. +++++..+
T Consensus 41 ~~~~~~~~~~~~~~~g~-l~~~~~~~~~i~~~d~~~----------~~~~~~~~~~~~~~~~i~~~~dg~-l~v~~~~~~ 108 (333)
T 2dg1_A 41 SKKGLQLEGLNFDRQGQ-LFLLDVFEGNIFKINPET----------KEIKRPFVSHKANPAAIKIHKDGR-LFVCYLGDF 108 (333)
T ss_dssp ESSCCCEEEEEECTTSC-EEEEETTTCEEEEECTTT----------CCEEEEEECSSSSEEEEEECTTSC-EEEEECTTS
T ss_pred eccCccccCcEECCCCC-EEEEECCCCEEEEEeCCC----------CcEEEEeeCCCCCcceEEECCCCc-EEEEeCCCC
Confidence 34666789999999886 777888889999999876 122222224667899999999886 66666655
Q ss_pred ---CcEEEEeCCCCCCCCcccceeeeecCCccEeeEEEecCCCcEEEEEeC------CCeEEEEEcCCCCCCCCeeeeec
Q 014454 201 ---AQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGD------DQYLLIWDLRTPSVSKPVQSVVA 271 (424)
Q Consensus 201 ---g~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~------dg~i~i~d~~~~~~~~~~~~~~~ 271 (424)
+.|.+||..+..... ......+...+.+++++|++. ++++... .+.|..+|..++. +..+..
T Consensus 109 ~~~~~i~~~d~~~~~~~~----~~~~~~~~~~~~~i~~d~~g~-l~v~~~~~~~~~~~~~l~~~~~~~~~----~~~~~~ 179 (333)
T 2dg1_A 109 KSTGGIFAATENGDNLQD----IIEDLSTAYCIDDMVFDSKGG-FYFTDFRGYSTNPLGGVYYVSPDFRT----VTPIIQ 179 (333)
T ss_dssp SSCCEEEEECTTSCSCEE----EECSSSSCCCEEEEEECTTSC-EEEEECCCBTTBCCEEEEEECTTSCC----EEEEEE
T ss_pred CCCceEEEEeCCCCEEEE----EEccCccCCcccceEECCCCC-EEEEeccccccCCCceEEEEeCCCCE----EEEeec
Confidence 689999987653210 100012345789999999986 5545443 3556666655433 223323
Q ss_pred cCCCeeEEEecCCCCeEEEEEeCCCcEEEEECCCCCCcceE--------ecCCCCCEEEEEEcCCCCcEEEEEECCCeEE
Q 014454 272 HQSEVNCLAFNPFNEWILATGSTDKTVKLFDLRKISTALHT--------FDSHKEEVFQVGWNPKNETILASCCLGRRLM 343 (424)
Q Consensus 272 ~~~~v~~v~~~~~~~~~l~tg~~dg~i~iwd~~~~~~~~~~--------~~~h~~~v~~~~~sp~~~~~l~s~~~dg~i~ 343 (424)
....+..++|+|++..++++.+.++.|.+||++..+..+.. +..+ ..+..+++++++. ++++...++.|.
T Consensus 180 ~~~~~~~i~~~~dg~~l~v~~~~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~-~~~~~i~~d~~G~-l~v~~~~~~~v~ 257 (333)
T 2dg1_A 180 NISVANGIALSTDEKVLWVTETTANRLHRIALEDDGVTIQPFGATIPYYFTGH-EGPDSCCIDSDDN-LYVAMYGQGRVL 257 (333)
T ss_dssp EESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSSSEEEEEEEEEEECCSS-SEEEEEEEBTTCC-EEEEEETTTEEE
T ss_pred CCCcccceEECCCCCEEEEEeCCCCeEEEEEecCCCcCcccccceEEEecCCC-CCCCceEECCCCC-EEEEEcCCCEEE
Confidence 34457899999999866666667889999999742333221 1222 4678899999985 777777788999
Q ss_pred EeeCCCCCcccCCCCcCCCCCeeeEEEcCC------CCCcceEEeCCCCCcEEEEEeC
Q 014454 344 VWDLSRIDEEQTPEDAEDGPPELLFIHGGH------TSKISDFSWNPCEDWVISSVAE 395 (424)
Q Consensus 344 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h------~~~v~~~~~~~~~~~~l~s~~~ 395 (424)
+||... ..+..+..+ ...+.+++|+|++..+++++..
T Consensus 258 ~~d~~g---------------~~~~~~~~~~~~~g~~~~~~~~~~~~dg~~L~v~~~~ 300 (333)
T 2dg1_A 258 VFNKRG---------------YPIGQILIPGRDEGHMLRSTHPQFIPGTNQLIICSND 300 (333)
T ss_dssp EECTTS---------------CEEEEEECTTGGGTCSCBCCEEEECTTSCEEEEEEEC
T ss_pred EECCCC---------------CEEEEEEcCCCccccccCcceEEECCCCCEEEEEeCc
Confidence 999742 223333322 2268999999998755555554
No 171
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.68 E-value=4.4e-14 Score=124.26 Aligned_cols=241 Identities=5% Similarity=-0.013 Sum_probs=165.1
Q ss_pred ceeEEEecCCCCcEEE-EEeCCCeEEEEeCCCCCCCCCCCCCCCCcEEE-ecCCCceeEEEecCCCCceEEEEeCCCcEE
Q 014454 127 EVNRARYMPQNPFLIA-TKTVSAEVYVFDYSKHPSKPPLDGACSPDLRL-RGHSTEGYGLSWSKFKEGHLLSGSDDAQIC 204 (424)
Q Consensus 127 ~v~~~~~~p~~~~~la-tg~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~-~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~ 204 (424)
...++++.+++. +++ +...++.|.+|+.... . ...+ ..+...+.++++.+++. ++++.. ++.|.
T Consensus 25 ~p~~i~~~~~g~-l~v~~~~~~~~i~~~~~~~~----------~-~~~~~~~~~~~p~~i~~~~~g~-l~v~~~-~~~i~ 90 (270)
T 1rwi_B 25 SPSGVAVDSAGN-VYVTSEGMYGRVVKLATGST----------G-TTVLPFNGLYQPQGLAVDGAGT-VYVTDF-NNRVV 90 (270)
T ss_dssp CEEEEEECTTCC-EEEEECSSSCEEEEECC----------------EECCCCSCCSCCCEEECTTCC-EEEEET-TTEEE
T ss_pred CccceEECCCCC-EEEEccCCCCcEEEecCCCc----------c-cceEeeCCcCCcceeEECCCCC-EEEEcC-CCEEE
Confidence 677899999886 666 5467889999987551 1 1111 22335678899999876 555555 88999
Q ss_pred EEeCCCCCCCCcccceeeee-cCCccEeeEEEecCCCcEEEEEeCCCeEEEEEcCCCCCCCCeeeeeccCCCeeEEEecC
Q 014454 205 LWDINAAPKNKSLEAMQIFK-VHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNP 283 (424)
Q Consensus 205 iwd~~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~v~~~~ 283 (424)
+||...... ..+. .....+..+++++++. ++++...++.|.+|+..+... ..........+..+++++
T Consensus 91 ~~d~~~~~~-------~~~~~~~~~~p~~i~~~~~g~-l~v~~~~~~~i~~~~~~~~~~---~~~~~~~~~~p~~i~~~~ 159 (270)
T 1rwi_B 91 TLAAGSNNQ-------TVLPFDGLNYPEGLAVDTQGA-VYVADRGNNRVVKLAAGSKTQ---TVLPFTGLNDPDGVAVDN 159 (270)
T ss_dssp EECTTCSCC-------EECCCCSCSSEEEEEECTTCC-EEEEEGGGTEEEEECTTCCSC---EECCCCSCCSCCCEEECT
T ss_pred EEeCCCceE-------eeeecCCcCCCcceEECCCCC-EEEEECCCCEEEEEECCCcee---EeeccccCCCceeEEEeC
Confidence 999865421 1111 1235688999999885 776777788999997654331 221122334678999999
Q ss_pred CCCeEEEEEeCCCcEEEEECCCCCCcceEecCCCCCEEEEEEcCCCCcEEEEEECCCeEEEeeCCCCCcccCCCCcCCCC
Q 014454 284 FNEWILATGSTDKTVKLFDLRKISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPEDAEDGP 363 (424)
Q Consensus 284 ~~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~ 363 (424)
++. ++++...++.|.+||... .........+...+.++++++++ .++++...++.|.+|+......
T Consensus 160 ~g~-l~v~~~~~~~i~~~~~~~-~~~~~~~~~~~~~p~~i~~d~~g-~l~v~~~~~~~v~~~~~~~~~~----------- 225 (270)
T 1rwi_B 160 SGN-VYVTDTDNNRVVKLEAES-NNQVVLPFTDITAPWGIAVDEAG-TVYVTEHNTNQVVKLLAGSTTS----------- 225 (270)
T ss_dssp TCC-EEEEEGGGTEEEEECTTT-CCEEECCCSSCCSEEEEEECTTC-CEEEEETTTSCEEEECTTCSCC-----------
T ss_pred CCC-EEEEECCCCEEEEEecCC-CceEeecccCCCCceEEEECCCC-CEEEEECCCCcEEEEcCCCCcc-----------
Confidence 887 677777788999999876 33222222333678999999998 5777777788999999865321
Q ss_pred CeeeEEEcCCCCCcceEEeCCCCCcEEEEEeCCCcEEEEecCCccCC
Q 014454 364 PELLFIHGGHTSKISDFSWNPCEDWVISSVAEDNILQIWQMAENIYH 410 (424)
Q Consensus 364 ~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~~ 410 (424)
......+...+.++++++++. ++++...++.|+++++.....+
T Consensus 226 ---~~~~~~~~~~p~~i~~~~~g~-l~v~~~~~~~v~~~~~~~~~~~ 268 (270)
T 1rwi_B 226 ---TVLPFTGLNTPLAVAVDSDRT-VYVADRGNDRVVKLTSLEHHHH 268 (270)
T ss_dssp ---EECCCCSCSCEEEEEECTTCC-EEEEEGGGTEEEEECCCGGGSC
T ss_pred ---eeeccCCCCCceeEEECCCCC-EEEEECCCCEEEEEcCCCcccc
Confidence 111112334688999999998 8888889999999999876554
No 172
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.68 E-value=5.2e-14 Score=141.44 Aligned_cols=252 Identities=9% Similarity=0.023 Sum_probs=165.4
Q ss_pred cCCceeEEEecCCCCcEEEEEeC-CC----eEEEEeCCCCCCCCCCCCCCCCcEEEecCCCceeEEEecCCCCceEEEEe
Q 014454 124 HDGEVNRARYMPQNPFLIATKTV-SA----EVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGS 198 (424)
Q Consensus 124 h~~~v~~~~~~p~~~~~latg~~-dg----~v~iw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~ 198 (424)
|...+..++|||+|+ +||.+.. .| .|++||+.+ + ....... ....+.+++|+|+++ .|+.++
T Consensus 123 ~~~~~~~~~~SPDg~-~la~~~~~~G~~~~~i~v~d~~t--------g--~~~~~~~-~~~~~~~~~wspDg~-~l~~~~ 189 (710)
T 2xdw_A 123 GTVALRGYAFSEDGE-YFAYGLSASGSDWVTIKFMKVDG--------A--KELPDVL-ERVKFSCMAWTHDGK-GMFYNA 189 (710)
T ss_dssp SCEEEEEEEECTTSS-EEEEEEEETTCSCEEEEEEETTT--------T--EEEEEEE-EEECSCCEEECTTSS-EEEEEE
T ss_pred CCEEEEEEEECCCCC-EEEEEEcCCCCceEEEEEEECCC--------C--CCCcccc-cCcccceEEEEeCCC-EEEEEE
Confidence 334678899999998 4554443 33 899999987 2 2221111 112367899999998 577777
Q ss_pred CCCc----------------EEEEeCCCCCCCCcccceeeeecCCccEeeEEEecCCCcEEEEEeC----CCeEEEEEcC
Q 014454 199 DDAQ----------------ICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGD----DQYLLIWDLR 258 (424)
Q Consensus 199 ~dg~----------------i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~----dg~i~i~d~~ 258 (424)
.++. |++|++.++..... .+.....|...+..+.|+|+++.++++... +..|++||+.
T Consensus 190 ~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~~--~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~ 267 (710)
T 2xdw_A 190 YPQQDGKSDGTETSTNLHQKLYYHVLGTDQSEDI--LCAEFPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQ 267 (710)
T ss_dssp CCCCSSCCSSSCCCCCCCCEEEEEETTSCGGGCE--EEECCTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGG
T ss_pred ECCccccccccccccCCCCEEEEEECCCCcccce--EEeccCCCCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECc
Confidence 6655 99999976532111 111122245567899999999977655542 5789999998
Q ss_pred C------CCCCCCeeeeeccCCCeeEEEecCCCCeEEEEEeCC---CcEEEEECCCCCC-cceEecCCCC--CEEEEEEc
Q 014454 259 T------PSVSKPVQSVVAHQSEVNCLAFNPFNEWILATGSTD---KTVKLFDLRKIST-ALHTFDSHKE--EVFQVGWN 326 (424)
Q Consensus 259 ~------~~~~~~~~~~~~~~~~v~~v~~~~~~~~~l~tg~~d---g~i~iwd~~~~~~-~~~~~~~h~~--~v~~~~~s 326 (424)
+ +.. ....+..+...+.. .|+|+|..+++.+..+ +.|.+||+.+... ....+..|.. .+..++|+
T Consensus 268 ~~~~~~~~~~--~~~~l~~~~~~~~~-~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~ 344 (710)
T 2xdw_A 268 QESNGITGIL--KWVKLIDNFEGEYD-YVTNEGTVFTFKTNRHSPNYRLINIDFTDPEESKWKVLVPEHEKDVLEWVACV 344 (710)
T ss_dssp GSSSSSCSSC--CCEEEECSSSSCEE-EEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCEEEEEEEE
T ss_pred ccccccCCcc--ceEEeeCCCCcEEE-EEeccCCEEEEEECCCCCCCEEEEEeCCCCCcccceeccCCCCCCeEEEEEEE
Confidence 6 321 24455555555554 4788888766555443 3699999987431 2345555544 68889999
Q ss_pred CCCCcEEEEEECCCe--EEEeeCCCCCcccCCCCcCCCCCeeeEEEcCCCCCcceEEeCCCCCcEEEEEe---CCCcEEE
Q 014454 327 PKNETILASCCLGRR--LMVWDLSRIDEEQTPEDAEDGPPELLFIHGGHTSKISDFSWNPCEDWVISSVA---EDNILQI 401 (424)
Q Consensus 327 p~~~~~l~s~~~dg~--i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~---~dg~i~v 401 (424)
+++ .++++...|+. |.+|++..+ ..+..+..+...+..+.++|+++.++++.+ ..+.|.+
T Consensus 345 ~~~-~lv~~~~~~g~~~l~~~~~~~g--------------~~~~~l~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~ 409 (710)
T 2xdw_A 345 RSN-FLVLCYLHDVKNTLQLHDLATG--------------ALLKIFPLEVGSVVGYSGQKKDTEIFYQFTSFLSPGIIYH 409 (710)
T ss_dssp TTT-EEEEEEEETTEEEEEEEETTTC--------------CEEEEECCCSSEEEEEECCTTCSEEEEEEECSSCCCEEEE
T ss_pred cCC-EEEEEEEECCEEEEEEEECCCC--------------CEEEecCCCCceEEEEecCCCCCEEEEEEeCCCCCCEEEE
Confidence 665 58888888885 455666443 233445556667888999999875555544 3578999
Q ss_pred EecCCcc
Q 014454 402 WQMAENI 408 (424)
Q Consensus 402 w~~~~~~ 408 (424)
||+.++.
T Consensus 410 ~d~~tg~ 416 (710)
T 2xdw_A 410 CDLTKEE 416 (710)
T ss_dssp EETTSSS
T ss_pred EECCCCc
Confidence 9998765
No 173
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.67 E-value=3.4e-15 Score=139.01 Aligned_cols=241 Identities=10% Similarity=0.118 Sum_probs=150.3
Q ss_pred CceeEEEecCCCCcEEEEEeCC--CeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCce-eEEEecCCCCceEEEEeCCCc
Q 014454 126 GEVNRARYMPQNPFLIATKTVS--AEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEG-YGLSWSKFKEGHLLSGSDDAQ 202 (424)
Q Consensus 126 ~~v~~~~~~p~~~~~latg~~d--g~v~iw~~~~~~~~~~~~~~~~~~~~~~~h~~~v-~~l~~~~~~~~~l~s~~~dg~ 202 (424)
..+..++|+|+|+.++++...+ ..|++|++.. .. ...+..+...+ ..+.|+|++. .|+.++.++.
T Consensus 36 ~~~~~~~~SpdG~~l~~~~~~~g~~~l~~~d~~~----------~~-~~~l~~~~~~~~~~~~~spdg~-~l~~~~~~~~ 103 (396)
T 3c5m_A 36 NYFYQKCFTQDGKKLLFAGDFDGNRNYYLLNLET----------QQ-AVQLTEGKGDNTFGGFISTDER-AFFYVKNELN 103 (396)
T ss_dssp CCTTSCCBCTTSCEEEEEECTTSSCEEEEEETTT----------TE-EEECCCSSCBCTTTCEECTTSS-EEEEEETTTE
T ss_pred eeeecCcCCCCCCEEEEEEecCCCceEEEEECCC----------Cc-EEEeecCCCCccccceECCCCC-EEEEEEcCCc
Confidence 3477889999998555554433 3788888776 11 22333333333 3488999998 6888888889
Q ss_pred EEEEeCCCCCCCCcccceeeeecCCccEee-------------------EEEecCCCcEEEEE----eCCCeEEEEEcCC
Q 014454 203 ICLWDINAAPKNKSLEAMQIFKVHEGVVED-------------------VAWHLRHEYLFGSV----GDDQYLLIWDLRT 259 (424)
Q Consensus 203 i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~-------------------~~~~~~~~~~~~s~----~~dg~i~i~d~~~ 259 (424)
|.+||+.++.. ......+...... +.|+|+++.+++.. ..+..|.+||+.+
T Consensus 104 l~~~d~~~~~~------~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~~~~l~~~d~~~ 177 (396)
T 3c5m_A 104 LMKVDLETLEE------QVIYTVDEEWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHTNPTCRLIKVDIET 177 (396)
T ss_dssp EEEEETTTCCE------EEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHHTCCCEEEEEEETTT
T ss_pred EEEEECCCCCc------EEEEecccccCCCCCEEEeccCCccccccccccccCCCCcceeeeeeccCCCcceEEEEECCC
Confidence 99999976532 1112212222212 35677776543222 4567899999987
Q ss_pred CCCCCCeeeeeccCCCeeEEEecC-CCCeEEEEEeCC------CcEEEEECCCCCCcceEecCC--CCCEEEEEEcCCCC
Q 014454 260 PSVSKPVQSVVAHQSEVNCLAFNP-FNEWILATGSTD------KTVKLFDLRKISTALHTFDSH--KEEVFQVGWNPKNE 330 (424)
Q Consensus 260 ~~~~~~~~~~~~~~~~v~~v~~~~-~~~~~l~tg~~d------g~i~iwd~~~~~~~~~~~~~h--~~~v~~~~~sp~~~ 330 (424)
++ ...+..+...+..+.|+| ++.. |+..+.+ ..|.+||+.. +. ...+..+ ...+..++|+|+++
T Consensus 178 g~----~~~~~~~~~~~~~~~~sp~dg~~-l~~~~~~~~~~~~~~l~~~d~~~-~~-~~~l~~~~~~~~~~~~~~spdg~ 250 (396)
T 3c5m_A 178 GE----LEVIHQDTAWLGHPIYRPFDDST-VGFCHEGPHDLVDARMWLVNEDG-SN-VRKIKEHAEGESCTHEFWIPDGS 250 (396)
T ss_dssp CC----EEEEEEESSCEEEEEEETTEEEE-EEEEECSCSSSCSCCCEEEETTS-CC-CEESSCCCTTEEEEEEEECTTSS
T ss_pred Cc----EEeeccCCcccccceECCCCCCE-EEEEecCCCCCCCceEEEEECCC-Cc-eeEeeccCCCccccceEECCCCC
Confidence 65 233335677889999999 6764 4444433 3688888865 33 2333333 23588899999997
Q ss_pred cEEEEEECC----CeEEEeeCCCCCcccCCCCcCCCCCeeeEEEcCCCCCcceEEeCC-CCCcEEEEEe-----------
Q 014454 331 TILASCCLG----RRLMVWDLSRIDEEQTPEDAEDGPPELLFIHGGHTSKISDFSWNP-CEDWVISSVA----------- 394 (424)
Q Consensus 331 ~~l~s~~~d----g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~-~~~~~l~s~~----------- 394 (424)
.+++++..+ +.|.+||+..+.. ..+....+ .. +.|+| +++ ++++++
T Consensus 251 ~l~~~~~~~~~~~~~l~~~d~~~g~~------------~~l~~~~~----~~-~~~s~~dg~-~l~~~~~~~p~~~~~~~ 312 (396)
T 3c5m_A 251 AMAYVSYFKGQTDRVIYKANPETLEN------------EEVMVMPP----CS-HLMSNFDGS-LMVGDGCDAPVDVADAD 312 (396)
T ss_dssp CEEEEEEETTTCCEEEEEECTTTCCE------------EEEEECCS----EE-EEEECSSSS-EEEEEECCC--------
T ss_pred EEEEEecCCCCccceEEEEECCCCCe------------EEeeeCCC----CC-CCccCCCCc-eEEEecCCcceeecccc
Confidence 644444332 4499999976432 22222222 22 88999 999 565543
Q ss_pred -----CCCcEEEEecCCccC
Q 014454 395 -----EDNILQIWQMAENIY 409 (424)
Q Consensus 395 -----~dg~i~vw~~~~~~~ 409 (424)
.++.|++|++.++..
T Consensus 313 ~~~~~~~~~i~~~d~~~~~~ 332 (396)
T 3c5m_A 313 SYNIENDPFLYVLNTKAKSA 332 (396)
T ss_dssp --CCCCCCEEEEEETTTTBC
T ss_pred ccccCCCCcEEEEecccCce
Confidence 347899999987754
No 174
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.66 E-value=1.5e-14 Score=133.04 Aligned_cols=220 Identities=9% Similarity=0.046 Sum_probs=139.5
Q ss_pred CCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCceeEEEecCCCCceEEEEe----------CCCcEEEEeCCCCCCCC
Q 014454 146 VSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGS----------DDAQICLWDINAAPKNK 215 (424)
Q Consensus 146 ~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~----------~dg~i~iwd~~~~~~~~ 215 (424)
.|+.|++||..+ .+....+..+..+ .++|+|+++ +++++. .++.|.+||+.+.+.
T Consensus 29 ~d~~v~v~D~~t----------~~~~~~i~~g~~p--~i~~spdg~-~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~-- 93 (361)
T 2oiz_A 29 TESRVHVYDYTN----------GKFLGMVPTAFNG--HVQVSNDGK-KIYTMTTYHERITRGKRSDVVEVWDADKLTF-- 93 (361)
T ss_dssp GGCEEEEEETTT----------CCEEEEEECCEEE--EEEECTTSS-EEEEEEEEETTSSSSCEEEEEEEEETTTCCE--
T ss_pred ccCeEEEEECCC----------CeEEEEecCCCCC--ceEECCCCC-EEEEEEecccccccCCCCCEEEEEECcCCcE--
Confidence 378999999876 3444556655444 899999998 576665 367899999876533
Q ss_pred cccceeeeec------CCccEeeEEEecCCCcEEEEEeC-CCeEEEEEcCCCCCCCCeee-eeccCCCeeEEEecCCCCe
Q 014454 216 SLEAMQIFKV------HEGVVEDVAWHLRHEYLFGSVGD-DQYLLIWDLRTPSVSKPVQS-VVAHQSEVNCLAFNPFNEW 287 (424)
Q Consensus 216 ~~~~~~~~~~------~~~~v~~~~~~~~~~~~~~s~~~-dg~i~i~d~~~~~~~~~~~~-~~~~~~~v~~v~~~~~~~~ 287 (424)
+..+.. +......++++|+++.++++... ++.|.+||+.+.+. +.. +. ... ...+.+.|.+..
T Consensus 94 ----~~~i~~~~~~~~~g~~p~~i~~spdg~~l~v~n~~~~~~v~v~d~~~~~~---~~~~i~-~~~-~~~v~~~p~~~~ 164 (361)
T 2oiz_A 94 ----EKEISLPPKRVQGLNYDGLFRQTTDGKFIVLQNASPATSIGIVDVAKGDY---VEDVTA-AAG-CWSVIPQPNRPR 164 (361)
T ss_dssp ----EEEEEECTTBCCBCCCGGGEEECTTSSEEEEEEESSSEEEEEEETTTTEE---EEEEGG-GTT-EEEEEECTTSSS
T ss_pred ----EEEEEcCccccccCCCcceEEECCCCCEEEEECCCCCCeEEEEECCCCcE---EEEEec-CCC-cceeEEcCCCCe
Confidence 222221 23456789999999988766544 78999999998653 333 22 111 122344454433
Q ss_pred EEEEEeCCCcEEEEECCCCCCcc-------------------------------------------------eEecCC--
Q 014454 288 ILATGSTDKTVKLFDLRKISTAL-------------------------------------------------HTFDSH-- 316 (424)
Q Consensus 288 ~l~tg~~dg~i~iwd~~~~~~~~-------------------------------------------------~~~~~h-- 316 (424)
.+++.+.||.+.+|++...++.. ..+...
T Consensus 165 ~~~~~~~dg~~~~v~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~ 244 (361)
T 2oiz_A 165 SFMTICGDGGLLTINLGEDGKVASQSRSKQMFSVKDDPIFIAPALDKDKAHFVSYYGNVYSADFSGDEVKVDGPWSLLND 244 (361)
T ss_dssp EEEEEETTSSEEEEEECTTSSEEEEEECCCCSCTTTSCBCSCCEECSSEEEEEBTTSEEEEEECSSSSCEEEEEEESCCH
T ss_pred eEEEECCCCcEEEEEECCCCcEeeeccccceEcCCCCceEEEecccCCEEEEEeCCCeEEEEEecCCCceecccccccCc
Confidence 45555555555555543211111 000000
Q ss_pred --------CCCEEEEEEcCCCCcEEEEEEC----------CCeEEEeeCCCCCcccCCCCcCCCCCeeeEEEcCCCCCcc
Q 014454 317 --------KEEVFQVGWNPKNETILASCCL----------GRRLMVWDLSRIDEEQTPEDAEDGPPELLFIHGGHTSKIS 378 (424)
Q Consensus 317 --------~~~v~~~~~sp~~~~~l~s~~~----------dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~ 378 (424)
......++|+|++..++++... .+.|.+||+.+. +.+..+..+. +.
T Consensus 245 ~~~~~~~~p~g~~~~a~~~dg~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~--------------~~v~~i~~~~--p~ 308 (361)
T 2oiz_A 245 EDKAKNWVPGGYNLVGLHRASGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTK--------------QRVARIPGRD--AL 308 (361)
T ss_dssp HHHHTTCEECCSSCEEEETTTTEEEEEEESSCCTTCTTCCCSEEEEEETTTT--------------EEEEEEECTT--CC
T ss_pred cccccccccCCeeEEEEecCCCeEEEEEccCCCcccccCCCceEEEEECCCC--------------cEEEEEecCC--ee
Confidence 0011126889988766655541 347999998875 5566666666 89
Q ss_pred eEEeCCCCCcEEEEEeCCCcEEEEecCCc
Q 014454 379 DFSWNPCEDWVISSVAEDNILQIWQMAEN 407 (424)
Q Consensus 379 ~~~~~~~~~~~l~s~~~dg~i~vw~~~~~ 407 (424)
+++|+|+++ +|++++. +.|.+||..++
T Consensus 309 ~ia~spdg~-~l~v~n~-~~v~v~D~~t~ 335 (361)
T 2oiz_A 309 SMTIDQQRN-LMLTLDG-GNVNVYDISQP 335 (361)
T ss_dssp EEEEETTTT-EEEEECS-SCEEEEECSSS
T ss_pred EEEECCCCC-EEEEeCC-CeEEEEECCCC
Confidence 999999999 5666666 99999999988
No 175
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.66 E-value=1e-14 Score=145.55 Aligned_cols=251 Identities=7% Similarity=-0.057 Sum_probs=150.4
Q ss_pred EEEec--CCCCc-EEEEEeCCCeEEEEeCCCCCCCCCCCCCCCCcEEEec-----CCCceeEEEecCCCCceEEEEeCC-
Q 014454 130 RARYM--PQNPF-LIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRG-----HSTEGYGLSWSKFKEGHLLSGSDD- 200 (424)
Q Consensus 130 ~~~~~--p~~~~-~latg~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~-----h~~~v~~l~~~~~~~~~l~s~~~d- 200 (424)
..+|+ |+++. ++++...+..|+++++.... ......+.. |...+.+++|+|+|+ .|++++.+
T Consensus 81 ~~~~~~SPDg~~~la~~~~~~~~l~~~~~~~~g--------~~~~~~l~~~~~~~~~~~~~~~~~spDg~-~l~~~~~~~ 151 (662)
T 3azo_A 81 PWAGVPRPAGGPLLVFTHFGDQRLYAFEPDAPG--------GAVPRPLTPVSAVGGGLRWADPVLLPERG-EVWCMAEEF 151 (662)
T ss_dssp CEEEECCSSSSCEEEEEBTTTCCEEEECTTSTT--------CCCCEECSCCCCSTTCEEEEEEEEETTTT-EEEEEEEEE
T ss_pred cceeeeecCCCeEEEEEECCCCeEEEEcCCCCC--------CCCCEeccCCccCCCCccccCcEECCCCC-EEEEEEecc
Confidence 44555 99986 44443345667777765000 011233444 566788999999998 67777766
Q ss_pred ---------CcEEEEeCCCCCCCCcccceeeee-cCCccEeeEEEecCCCcEEEEEeCC-------CeEEEEEcC-CCCC
Q 014454 201 ---------AQICLWDINAAPKNKSLEAMQIFK-VHEGVVEDVAWHLRHEYLFGSVGDD-------QYLLIWDLR-TPSV 262 (424)
Q Consensus 201 ---------g~i~iwd~~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~~s~~~d-------g~i~i~d~~-~~~~ 262 (424)
..|++||+.+..... ......+. .+...+..++|+|+++.++.+.... ..|++||+. ++..
T Consensus 152 ~~~~~~~~~~~i~~~~~~~~~~~~-~~~~~~l~~~~~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~ 230 (662)
T 3azo_A 152 TGEGPSDVRRFLAAVPLDGSAAAD-RSAVRELSDDAHRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRF 230 (662)
T ss_dssp CSSSTTCEEEEEEEEETTSTTTTC-GGGSEESSCSCSSEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCE
T ss_pred cCCCCCCceeEEEEEECCCCcccc-CCceeEEEecCCCcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcc
Confidence 589999997620000 00112233 4556788999999998665343332 479999998 4421
Q ss_pred CCCeeeeeccCCCeeEEEecCCCCeEEEEEeCCC--cEEEEECCCCCCcceEecCCCCC--------EEEEEEcCCCCcE
Q 014454 263 SKPVQSVVAHQSEVNCLAFNPFNEWILATGSTDK--TVKLFDLRKISTALHTFDSHKEE--------VFQVGWNPKNETI 332 (424)
Q Consensus 263 ~~~~~~~~~~~~~v~~v~~~~~~~~~l~tg~~dg--~i~iwd~~~~~~~~~~~~~h~~~--------v~~~~~sp~~~~~ 332 (424)
.........+...+..++|+|+|+ +++++..++ .|.+||+.. ++.......+... +..++|+|++. +
T Consensus 231 ~~~~~l~~~~~~~~~~~~~spdg~-l~~~~~~~~~~~l~~~~~~~-~~~~~l~~~~~~~~~p~w~~~~~~~~~~~~~~-~ 307 (662)
T 3azo_A 231 ADTRTLLGGPEEAIAQAEWAPDGS-LIVATDRTGWWNLHRVDPAT-GAATQLCRREEEFAGPLWTPGMRWFAPLANGL-I 307 (662)
T ss_dssp EEEEEEEEETTBCEEEEEECTTSC-EEEEECTTSSCEEEEECTTT-CCEEESSCCSSBSSCCCCSTTCCSEEECTTSC-E
T ss_pred cccEEeCCCCCceEcceEECCCCe-EEEEECCCCCeEEEEEECCC-CceeecccccccccCccccccCceEeEeCCCE-E
Confidence 011222234567899999999999 788888888 566666544 3332222222221 56789999885 7
Q ss_pred EEEEECCCeEEEeeCCCCCcccCCCCcCCCCCeeeEEEcCCCCCcceEEeCCCCCcE-EEEEeCCCc--EEEEecCCcc
Q 014454 333 LASCCLGRRLMVWDLSRIDEEQTPEDAEDGPPELLFIHGGHTSKISDFSWNPCEDWV-ISSVAEDNI--LQIWQMAENI 408 (424)
Q Consensus 333 l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~-l~s~~~dg~--i~vw~~~~~~ 408 (424)
+++++. +.++||.+.... ..+..+..|...+..+ |++++..+ +++++.+.. |.+|++.++.
T Consensus 308 ~~~~~~-~~~~l~~~d~~~-------------~~~~~l~~~~~~~~~~-~s~~~~~~~~~~~~~~~~~~i~~~d~~~g~ 371 (662)
T 3azo_A 308 AVVHGK-GAAVLGILDPES-------------GELVDAAGPWTEWAAT-LTVSGTRAVGVAASPRTAYEVVELDTVTGR 371 (662)
T ss_dssp EEEEBS-SSCEEEEEETTT-------------TEEEECCSSCCEEEEE-EEEETTEEEEEEEETTEEEEEEEEETTTCC
T ss_pred EEEEEc-CccEEEEEECCC-------------CcEEEecCCCCeEEEE-EecCCCEEEEEEcCCCCCCEEEEEECCCCc
Confidence 888888 999999543211 1234455666666666 13444434 444455544 5555665553
No 176
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.64 E-value=1e-13 Score=139.99 Aligned_cols=204 Identities=9% Similarity=0.056 Sum_probs=129.1
Q ss_pred eEEEecCCCCcEEEEEeCC---------CeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCceeEEEecCCCCceEEEEeC
Q 014454 129 NRARYMPQNPFLIATKTVS---------AEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSD 199 (424)
Q Consensus 129 ~~~~~~p~~~~~latg~~d---------g~v~iw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~ 199 (424)
..++|||+++ .||.++.+ +.+.+||+.+ +. ...+..|...+...+|||+|+ .||.++
T Consensus 65 ~~~~~Spdg~-~l~~~~~~~~~~r~~~~~~~~~~d~~~--------~~---~~~l~~~~~~~~~~~~SPdG~-~la~~~- 130 (740)
T 4a5s_A 65 NDYSISPDGQ-FILLEYNYVKQWRHSYTASYDIYDLNK--------RQ---LITEERIPNNTQWVTWSPVGH-KLAYVW- 130 (740)
T ss_dssp CEEEECTTSS-EEEEEEEEEECSSSCEEEEEEEEETTT--------TE---ECCSSCCCTTEEEEEECSSTT-CEEEEE-
T ss_pred cceEECCCCC-EEEEEECCeeeEEEccceEEEEEECCC--------Cc---EEEcccCCCcceeeEECCCCC-EEEEEE-
Confidence 4588999997 56666654 6678999987 22 223556778899999999998 577764
Q ss_pred CCcEEEEeCCCCCCCCcccc----eeeeecCC---------ccEeeEEEecCCCcEEEEEeCCC----------------
Q 014454 200 DAQICLWDINAAPKNKSLEA----MQIFKVHE---------GVVEDVAWHLRHEYLFGSVGDDQ---------------- 250 (424)
Q Consensus 200 dg~i~iwd~~~~~~~~~~~~----~~~~~~~~---------~~v~~~~~~~~~~~~~~s~~~dg---------------- 250 (424)
++.|++|++.++... .+.. ...+.++. +....+.|+|+|+.++.+...++
T Consensus 131 ~~~i~~~~~~~~~~~-~lt~~g~~~~~~~g~~~~v~~ee~~~~~~~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~~~ 209 (740)
T 4a5s_A 131 NNDIYVKIEPNLPSY-RITWTGKEDIIYNGITDWVYEEEVFSAYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQ 209 (740)
T ss_dssp TTEEEEESSTTSCCE-ECCSCCBTTTEEESBCCHHHHHHTSSSSBCEEECTTSSEEEEEEEECTTCCEEEEEECCSTTCS
T ss_pred CCeEEEEECCCCceE-EEcCCCCccceecCcccccccchhcCCCcceEECCCCCEEEEEEEcccCCceEEEEeecCCCCC
Confidence 689999999876421 1100 00112222 12235899999986653322222
Q ss_pred -------------------eEEEEEcCC---CCCCCCeeeee------ccCCCeeEEEecCCCCeEEEEEe-C---CCcE
Q 014454 251 -------------------YLLIWDLRT---PSVSKPVQSVV------AHQSEVNCLAFNPFNEWILATGS-T---DKTV 298 (424)
Q Consensus 251 -------------------~i~i~d~~~---~~~~~~~~~~~------~~~~~v~~v~~~~~~~~~l~tg~-~---dg~i 298 (424)
.|++||+.+ +.... ...+. .+...+..++|+|+++. ++... . +..|
T Consensus 210 ~~~~~~~~yp~~G~~~~~~~l~v~d~~~~~~~~~~~-~~~l~~~~~~~~~~~~~~~~~wspdg~~-~~~~~~r~~~~~~i 287 (740)
T 4a5s_A 210 YPKTVRVPYPKAGAVNPTVKFFVVNTDSLSSVTNAT-SIQITAPASMLIGDHYLCDVTWATQERI-SLQWLRRIQNYSVM 287 (740)
T ss_dssp SCEEEEEECCBTTSCCCEEEEEEEETTSCCSSSCCC-EEEECCCHHHHTSCEEEEEEEEEETTEE-EEEEEESSTTEEEE
T ss_pred CCcceeecCCCCcCcCCeeEEEEEECCCCCCCCcce-EEEecCCccCCCCCeEEEEEEEeCCCeE-EEEEeCCCCCEEEE
Confidence 578888887 53211 22332 26777999999999984 44433 2 2379
Q ss_pred EEEECCCCCC------cceEe--cCCCCCEE-----EEEEcCCCCcEEEEEE-CCC--eEEEeeCCCC
Q 014454 299 KLFDLRKIST------ALHTF--DSHKEEVF-----QVGWNPKNETILASCC-LGR--RLMVWDLSRI 350 (424)
Q Consensus 299 ~iwd~~~~~~------~~~~~--~~h~~~v~-----~~~~sp~~~~~l~s~~-~dg--~i~iwd~~~~ 350 (424)
.+||+.+ ++ .+..+ ..|...|. ..+|+|+|+.+++..+ .+| .|.+||+..+
T Consensus 288 ~~~d~~t-g~~~~~~~~~~~l~~~~~~~~v~~~~~~~p~fspDG~~l~~~~s~~~G~~~l~~~~~~~~ 354 (740)
T 4a5s_A 288 DICDYDE-SSGRWNCLVARQHIEMSTTGWVGRFRPSEPHFTLDGNSFYKIISNEEGYRHICYFQIDKK 354 (740)
T ss_dssp EEEEEET-TTTEEEECGGGCEEEECSSSCSSSSSCCCCEECTTSSEEEEEEECTTSCEEEEEEETTCS
T ss_pred EEEECCC-CccccceeEEEEeeeccCCceEccCcCCCceEcCCCCEEEEEEEcCCCceEEEEEECCCC
Confidence 9999987 33 12222 44555554 7899999986552554 444 4777787653
No 177
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.60 E-value=1.1e-12 Score=117.93 Aligned_cols=245 Identities=9% Similarity=0.067 Sum_probs=161.0
Q ss_pred CCceeEEEecCCCCcEEEE-------EeCCCeEEEEeCCCCCCCCCCCCCCCCcEEEe-----cCCCceeEEEecCC-CC
Q 014454 125 DGEVNRARYMPQNPFLIAT-------KTVSAEVYVFDYSKHPSKPPLDGACSPDLRLR-----GHSTEGYGLSWSKF-KE 191 (424)
Q Consensus 125 ~~~v~~~~~~p~~~~~lat-------g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~-----~h~~~v~~l~~~~~-~~ 191 (424)
-....+++|.+++. ++++ +..++.|.+|+..+ + . ...+. ++...+.+++++++ +.
T Consensus 17 ~~~~~~~~~~~~g~-l~~~~~~~~~~~~~~~~i~~~d~~~--------g--~-~~~~~~~~~~~~~~~~~~i~~~~~~g~ 84 (314)
T 1pjx_A 17 IPGAEGPVFDKNGD-FYIVAPEVEVNGKPAGEILRIDLKT--------G--K-KTVICKPEVNGYGGIPAGCQCDRDANQ 84 (314)
T ss_dssp CTTCEEEEECTTSC-EEEEETTCEETTEECCEEEEECTTT--------C--C-EEEEECCEETTEECCEEEEEECSSSSE
T ss_pred CCCccCceECCCCC-EEEEEeccccCCCCCCEEEEEeCCC--------C--c-EEEEEecccCCCCCCCceEEEecCCCc
Confidence 34667899998885 6666 56788999999765 1 1 12222 24467899999998 54
Q ss_pred ceEEEEeCCCcEEEEeCCCCCCCCcccceeeee-cCCccEeeEEEecCCCcEEEEEeCC---------------CeEEEE
Q 014454 192 GHLLSGSDDAQICLWDINAAPKNKSLEAMQIFK-VHEGVVEDVAWHLRHEYLFGSVGDD---------------QYLLIW 255 (424)
Q Consensus 192 ~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~~s~~~d---------------g~i~i~ 255 (424)
|..++..+.|.+||.. +... .+. ..... .....+.++++++++. ++++...+ +.|..|
T Consensus 85 --l~v~~~~~~l~~~d~~-g~~~-~~~-~~~~~~~~~~~~~~i~~d~~g~-l~v~~~~~~~~~~~~~~~~~~~~~~l~~~ 158 (314)
T 1pjx_A 85 --LFVADMRLGLLVVQTD-GTFE-EIA-KKDSEGRRMQGCNDCAFDYEGN-LWITAPAGEVAPADYTRSMQEKFGSIYCF 158 (314)
T ss_dssp --EEEEETTTEEEEEETT-SCEE-ECC-SBCTTSCBCBCCCEEEECTTSC-EEEEECBCBCTTSCCCBTTSSSCEEEEEE
T ss_pred --EEEEECCCCEEEEeCC-CCEE-EEE-eccCCCccccCCcCEEECCCCC-EEEEecCcccccccccccccCCCCeEEEE
Confidence 4444445578899987 4211 000 00000 1224588999999986 55555444 567777
Q ss_pred EcCCCCCCCCeeeeeccCCCeeEEEec----CCCCeEEEEEeCCCcEEEEECCCCCC-----cceEecCCC-CCEEEEEE
Q 014454 256 DLRTPSVSKPVQSVVAHQSEVNCLAFN----PFNEWILATGSTDKTVKLFDLRKIST-----ALHTFDSHK-EEVFQVGW 325 (424)
Q Consensus 256 d~~~~~~~~~~~~~~~~~~~v~~v~~~----~~~~~~l~tg~~dg~i~iwd~~~~~~-----~~~~~~~h~-~~v~~~~~ 325 (424)
|.. +. +..+..+......++|+ |+++.++++...++.|.+||+...+. ....+..+. ..+..+++
T Consensus 159 ~~~-g~----~~~~~~~~~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~ 233 (314)
T 1pjx_A 159 TTD-GQ----MIQVDTAFQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDF 233 (314)
T ss_dssp CTT-SC----EEEEEEEESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEE
T ss_pred CCC-CC----EEEeccCCCCcceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCccccceEEEECCCCCCCCCCceEE
Confidence 764 32 22332334457889999 98876666666788999999862122 223334443 56889999
Q ss_pred cCCCCcEEEEEECCCeEEEeeCCCCCcccCCCCcCCCCCeeeEEEcCCCCCcceEEeCCCCCcEEEEEeCCCcEEEEecC
Q 014454 326 NPKNETILASCCLGRRLMVWDLSRIDEEQTPEDAEDGPPELLFIHGGHTSKISDFSWNPCEDWVISSVAEDNILQIWQMA 405 (424)
Q Consensus 326 sp~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~vw~~~ 405 (424)
++++. ++++...++.|.+||..++. .+..+..+...+.+++|+|++..++++...++.|..|++.
T Consensus 234 d~~G~-l~v~~~~~~~i~~~d~~~g~--------------~~~~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~l~~~~~~ 298 (314)
T 1pjx_A 234 DEDNN-LLVANWGSSHIEVFGPDGGQ--------------PKMRIRCPFEKPSNLHFKPQTKTIFVTEHENNAVWKFEWQ 298 (314)
T ss_dssp BTTCC-EEEEEETTTEEEEECTTCBS--------------CSEEEECSSSCEEEEEECTTSSEEEEEETTTTEEEEEECS
T ss_pred CCCCC-EEEEEcCCCEEEEEcCCCCc--------------EeEEEeCCCCCceeEEECCCCCEEEEEeCCCCeEEEEeCC
Confidence 99985 77777778899999987432 2233344556789999999998666776677899999987
Q ss_pred Cc
Q 014454 406 EN 407 (424)
Q Consensus 406 ~~ 407 (424)
..
T Consensus 299 ~~ 300 (314)
T 1pjx_A 299 RN 300 (314)
T ss_dssp SC
T ss_pred CC
Confidence 54
No 178
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.60 E-value=2.7e-13 Score=123.84 Aligned_cols=224 Identities=14% Similarity=0.166 Sum_probs=141.7
Q ss_pred CceeEEEecCCCCcEEEEEeCC---C--eEEEEeCCCCCCCCCCCCCCCCcEEEecCCCceeEEEecCCCCceEEEEeC-
Q 014454 126 GEVNRARYMPQNPFLIATKTVS---A--EVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSD- 199 (424)
Q Consensus 126 ~~v~~~~~~p~~~~~latg~~d---g--~v~iw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~- 199 (424)
..+..++|+|+|+. ||..+.+ + .|++|++.. .. ...+..+.. +..++|+|++. .|+.++.
T Consensus 59 ~~~~~~~~SpDg~~-la~~~~~~~~~~~~l~~~~~~~----------g~-~~~l~~~~~-~~~~~wspdg~-~l~~~~~~ 124 (347)
T 2gop_A 59 ENATMPRISPDGKK-IAFMRANEEKKVSEIWVADLET----------LS-SKKILEAKN-IRSLEWNEDSR-KLLIVGFK 124 (347)
T ss_dssp ESCEEEEECTTSSE-EEEEEEETTTTEEEEEEEETTT----------TE-EEEEEEESE-EEEEEECTTSS-EEEEEEEC
T ss_pred ccCCCeEECCCCCE-EEEEEeccCCCcceEEEEECCC----------Cc-eEEEEcCCC-ccceeECCCCC-EEEEEEcc
Confidence 56888999999984 5544432 3 477777765 12 223333334 89999999998 4665543
Q ss_pred --------------------------CCcEEEEeCCCCCCCCcccceeeeecCCccEeeEEEecCCCcEEEEEeCCC---
Q 014454 200 --------------------------DAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQ--- 250 (424)
Q Consensus 200 --------------------------dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~dg--- 250 (424)
...|.+||+.++. .+..+.. . .+..++|+|++ +++++..++
T Consensus 125 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~------~~~~l~~-~-~~~~~~~spdg--~~~~~~~~~~~~ 194 (347)
T 2gop_A 125 RREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEE------VIEEFEK-P-RFSSGIWHRDK--IVVNVPHREIIP 194 (347)
T ss_dssp CCC---------CCCC---------CEEEEEEEETTTTE------EEEEEEE-E-TTCEEEEETTE--EEEEEECCCSSC
T ss_pred CCCcCCcEEEcccceeecCcccccCccceEEEEECCCCe------EEeeecC-C-CcccccCCCCe--EEEEEecccccc
Confidence 2568899987652 1122332 3 78899999998 555555432
Q ss_pred ----eEEEEEcCCCCCCCCeeeeeccCCCeeEEEecCCCCeEEEEEeCC-------CcEEEEECCCCCCcceEecCCCCC
Q 014454 251 ----YLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATGSTD-------KTVKLFDLRKISTALHTFDSHKEE 319 (424)
Q Consensus 251 ----~i~i~d~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~l~tg~~d-------g~i~iwd~~~~~~~~~~~~~h~~~ 319 (424)
...||.+.++. ...+..+ ..+..+ +|+|+.+++.+..+ ..|.+|| + ++.......+...
T Consensus 195 ~~~~~~~l~~~d~~~----~~~l~~~-~~~~~~--spdg~~l~~~~~~~~~~~~~~~~l~~~d--~-~~~~~l~~~~~~~ 264 (347)
T 2gop_A 195 QYFKFWDIYIWEDGK----EEKMFEK-VSFYAV--DSDGERILLYGKPEKKYMSEHNKLYIYD--G-KEVMGILDEVDRG 264 (347)
T ss_dssp CSSCCEEEEEEETTE----EEEEEEE-ESEEEE--EECSSCEEEEECCSSSCCCSSCEEEEEC--S-SCEEESSTTCCSE
T ss_pred cccccccEEEeCCCc----eEEeccC-cceeeE--CCCCCEEEEEEccccCCccccceEEEEC--C-CceEeccccCCcc
Confidence 34555444322 3333334 445444 89998644444332 4688888 3 4444444556678
Q ss_pred EEE-EEEcCCCCcEEEEEECCCeEEEeeCCCCCcccCCCCcCCCCCeeeEEEcCCCCCcceEEeCCCCCcEEEEEeCCCc
Q 014454 320 VFQ-VGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPEDAEDGPPELLFIHGGHTSKISDFSWNPCEDWVISSVAEDNI 398 (424)
Q Consensus 320 v~~-~~~sp~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~ 398 (424)
+.. +.|+ ++ ++++++.++.++|| +..+ .... +..+...|.+++|+| . ++++++.++.
T Consensus 265 ~~~~~~~s-dg--~~~~~~~~~~~~l~-~~~g--------------~~~~-~~~~~~~v~~~~~s~--~-~~~~~~~~~~ 322 (347)
T 2gop_A 265 VGQAKIKD-GK--VYFTLFEEGSVNLY-IWDG--------------EIKP-IAKGRHWIMGFDVDE--I-VVYLKETATR 322 (347)
T ss_dssp EEEEEEET-TE--EEEEEEETTEEEEE-EESS--------------SEEE-EECSSSEEEEEEESS--S-EEEEEECSSS
T ss_pred cCCccEEc-Cc--EEEEEecCCcEEEE-EcCC--------------ceEE-EecCCCeEEeeeeeC--c-EEEEEcCCCC
Confidence 886 9999 76 78899999999999 8632 1122 223466789999999 4 6777776666
Q ss_pred E-EEEecC
Q 014454 399 L-QIWQMA 405 (424)
Q Consensus 399 i-~vw~~~ 405 (424)
. .||.+.
T Consensus 323 ~~~l~~~~ 330 (347)
T 2gop_A 323 LRELFTWD 330 (347)
T ss_dssp CCEEEEES
T ss_pred hHHheEeC
Confidence 5 788775
No 179
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.60 E-value=9.2e-14 Score=129.25 Aligned_cols=232 Identities=7% Similarity=-0.006 Sum_probs=143.0
Q ss_pred EEEecCCCCcEEEEEeCCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCceeE-------------------EEecCCC
Q 014454 130 RARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYG-------------------LSWSKFK 190 (424)
Q Consensus 130 ~~~~~p~~~~~latg~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~-------------------l~~~~~~ 190 (424)
.+.|+|+++ .|+.++.++.|++|++.. .........+...... +.|+|++
T Consensus 85 ~~~~spdg~-~l~~~~~~~~l~~~d~~~----------~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg 153 (396)
T 3c5m_A 85 GGFISTDER-AFFYVKNELNLMKVDLET----------LEEQVIYTVDEEWKGYGTWVANSDCTKLVGIEILKRDWQPLT 153 (396)
T ss_dssp TCEECTTSS-EEEEEETTTEEEEEETTT----------CCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCC
T ss_pred cceECCCCC-EEEEEEcCCcEEEEECCC----------CCcEEEEecccccCCCCCEEEeccCCccccccccccccCCCC
Confidence 478999997 677778888999999876 1222222223322222 4577777
Q ss_pred CceEEEE-----eCCCcEEEEeCCCCCCCCcccceeeeecCCccEeeEEEec-CCCcEEEEEeCC------CeEEEEEcC
Q 014454 191 EGHLLSG-----SDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHL-RHEYLFGSVGDD------QYLLIWDLR 258 (424)
Q Consensus 191 ~~~l~s~-----~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~~~s~~~d------g~i~i~d~~ 258 (424)
.. ++.+ ..+..|.+||+.++.. ..+..+...+..+.|+| ++..++ .++.+ ..|.+||+.
T Consensus 154 ~~-~~~~~~~~~~~~~~l~~~d~~~g~~-------~~~~~~~~~~~~~~~sp~dg~~l~-~~~~~~~~~~~~~l~~~d~~ 224 (396)
T 3c5m_A 154 SW-EKFAEFYHTNPTCRLIKVDIETGEL-------EVIHQDTAWLGHPIYRPFDDSTVG-FCHEGPHDLVDARMWLVNED 224 (396)
T ss_dssp SH-HHHHHHHHTCCCEEEEEEETTTCCE-------EEEEEESSCEEEEEEETTEEEEEE-EEECSCSSSCSCCCEEEETT
T ss_pred cc-eeeeeeccCCCcceEEEEECCCCcE-------EeeccCCcccccceECCCCCCEEE-EEecCCCCCCCceEEEEECC
Confidence 63 4433 4567899999976531 12224567789999999 666454 33333 468888887
Q ss_pred CCCCCCCeeeeecc--CCCeeEEEecCCCCeEEEEEeCC----CcEEEEECCCCCCcceEecCCCCCEEEEEEcC-CCCc
Q 014454 259 TPSVSKPVQSVVAH--QSEVNCLAFNPFNEWILATGSTD----KTVKLFDLRKISTALHTFDSHKEEVFQVGWNP-KNET 331 (424)
Q Consensus 259 ~~~~~~~~~~~~~~--~~~v~~v~~~~~~~~~l~tg~~d----g~i~iwd~~~~~~~~~~~~~h~~~v~~~~~sp-~~~~ 331 (424)
.+.. ..+..+ ...+..++|+|+++.+++++..+ +.|++||+.+ ++....... . ... +.|+| ++.
T Consensus 225 ~~~~----~~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~-g~~~~l~~~-~-~~~-~~~s~~dg~- 295 (396)
T 3c5m_A 225 GSNV----RKIKEHAEGESCTHEFWIPDGSAMAYVSYFKGQTDRVIYKANPET-LENEEVMVM-P-PCS-HLMSNFDGS- 295 (396)
T ss_dssp SCCC----EESSCCCTTEEEEEEEECTTSSCEEEEEEETTTCCEEEEEECTTT-CCEEEEEEC-C-SEE-EEEECSSSS-
T ss_pred CCce----eEeeccCCCccccceEECCCCCEEEEEecCCCCccceEEEEECCC-CCeEEeeeC-C-CCC-CCccCCCCc-
Confidence 6442 222222 23578899999998644443332 3499999986 333222211 1 233 89999 997
Q ss_pred EEEEEE----------------CCCeEEEeeCCCCCcccCCCCcCCCCCeeeEEEcCCCC-----------CcceEEeCC
Q 014454 332 ILASCC----------------LGRRLMVWDLSRIDEEQTPEDAEDGPPELLFIHGGHTS-----------KISDFSWNP 384 (424)
Q Consensus 332 ~l~s~~----------------~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~-----------~v~~~~~~~ 384 (424)
++++++ .+..|.+||+..+.. ..+ ..+.. .+..++|+|
T Consensus 296 ~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d~~~~~~------------~~l---~~~~~~~~~~~~~~~~~~~~~~~s~ 360 (396)
T 3c5m_A 296 LMVGDGCDAPVDVADADSYNIENDPFLYVLNTKAKSA------------QKL---CKHSTSWDVLDGDRQITHPHPSFTP 360 (396)
T ss_dssp EEEEEECCC----------CCCCCCEEEEEETTTTBC------------CEE---EECCCCCCCBTTBSSTTCCCCEECT
T ss_pred eEEEecCCcceeeccccccccCCCCcEEEEecccCce------------EEc---cCCCCccccccccccCCCCCceEcc
Confidence 566544 346899999876431 111 22222 256789999
Q ss_pred CCCcEEEEEeCCCcEEEEecC
Q 014454 385 CEDWVISSVAEDNILQIWQMA 405 (424)
Q Consensus 385 ~~~~~l~s~~~dg~i~vw~~~ 405 (424)
+++++++++..++...||.+.
T Consensus 361 dg~~l~~~s~~~~~~~l~~~~ 381 (396)
T 3c5m_A 361 NDDGVLFTSDFEGVPAIYIAD 381 (396)
T ss_dssp TSSEEEEEECTTSSCEEEEEE
T ss_pred CCCeEEEEecCCCCceEEEEE
Confidence 999666665566766666653
No 180
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.60 E-value=1.8e-13 Score=124.39 Aligned_cols=247 Identities=9% Similarity=0.052 Sum_probs=163.7
Q ss_pred CCceeEEEecCCCCcEEEEEeCCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCceeEEEecCCCCceEEEEeCCCcEE
Q 014454 125 DGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDDAQIC 204 (424)
Q Consensus 125 ~~~v~~~~~~p~~~~~latg~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~ 204 (424)
...|.+++|+++.. .++..+.++.++.|.- .....+..+...+.+++|++++. +++++..++.|.
T Consensus 5 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~g~-l~~~~~~~~~i~ 69 (333)
T 2dg1_A 5 QQDLPTLFYSGKSN-SAVPIISESELQTITA-------------EPWLEISKKGLQLEGLNFDRQGQ-LFLLDVFEGNIF 69 (333)
T ss_dssp -CCCCBCCSCGGGG-CSSCCCCGGGSCEEEC-------------EEEEEEESSCCCEEEEEECTTSC-EEEEETTTCEEE
T ss_pred ccccceeeecCCcc-ceeEEeecccCccccc-------------ceeEEEeccCccccCcEECCCCC-EEEEECCCCEEE
Confidence 34578889999765 4555567888888832 22455667777789999999887 677888899999
Q ss_pred EEeCCCCCCCCcccceeeeecCCccEeeEEEecCCCcEEEEEeCC----CeEEEEEcCCCCCCCCeeeee--ccCCCeeE
Q 014454 205 LWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDD----QYLLIWDLRTPSVSKPVQSVV--AHQSEVNC 278 (424)
Q Consensus 205 iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~d----g~i~i~d~~~~~~~~~~~~~~--~~~~~v~~ 278 (424)
+||..++.. ......+...+.++++++++. ++++...+ +.|.+||..++.. ...+. .+...+..
T Consensus 70 ~~d~~~~~~------~~~~~~~~~~~~~i~~~~dg~-l~v~~~~~~~~~~~i~~~d~~~~~~---~~~~~~~~~~~~~~~ 139 (333)
T 2dg1_A 70 KINPETKEI------KRPFVSHKANPAAIKIHKDGR-LFVCYLGDFKSTGGIFAATENGDNL---QDIIEDLSTAYCIDD 139 (333)
T ss_dssp EECTTTCCE------EEEEECSSSSEEEEEECTTSC-EEEEECTTSSSCCEEEEECTTSCSC---EEEECSSSSCCCEEE
T ss_pred EEeCCCCcE------EEEeeCCCCCcceEEECCCCc-EEEEeCCCCCCCceEEEEeCCCCEE---EEEEccCccCCcccc
Confidence 999876531 111223567899999999986 66566555 6899999887653 11111 23457899
Q ss_pred EEecCCCCeEEEEEeC------CCcEEEEECCCCCCcceEecCCCCCEEEEEEcCCCCcEEEEEECCCeEEEeeCCCCCc
Q 014454 279 LAFNPFNEWILATGST------DKTVKLFDLRKISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDE 352 (424)
Q Consensus 279 v~~~~~~~~~l~tg~~------dg~i~iwd~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~l~s~~~dg~i~iwd~~~~~~ 352 (424)
++++|++. ++++... .+.|..+|... + .+..+..+...+..++|+|++..++++.+.++.|.+|++.....
T Consensus 140 i~~d~~g~-l~v~~~~~~~~~~~~~l~~~~~~~-~-~~~~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~i~~~d~~~~g~ 216 (333)
T 2dg1_A 140 MVFDSKGG-FYFTDFRGYSTNPLGGVYYVSPDF-R-TVTPIIQNISVANGIALSTDEKVLWVTETTANRLHRIALEDDGV 216 (333)
T ss_dssp EEECTTSC-EEEEECCCBTTBCCEEEEEECTTS-C-CEEEEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSS
T ss_pred eEECCCCC-EEEEeccccccCCCceEEEEeCCC-C-EEEEeecCCCcccceEECCCCCEEEEEeCCCCeEEEEEecCCCc
Confidence 99999987 5555543 24566666543 2 23333333446789999999975566666788999999864211
Q ss_pred -ccCCCCcCCCCCeeeEEEcCCCCCcceEEeCCCCCcEEEEEeCCCcEEEEecCCc
Q 014454 353 -EQTPEDAEDGPPELLFIHGGHTSKISDFSWNPCEDWVISSVAEDNILQIWQMAEN 407 (424)
Q Consensus 353 -~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~ 407 (424)
..... ........++ ..+..+++++++. ++++...++.|.+|+....
T Consensus 217 ~~~~~~------~~~~~~~~~~-~~~~~i~~d~~G~-l~v~~~~~~~v~~~d~~g~ 264 (333)
T 2dg1_A 217 TIQPFG------ATIPYYFTGH-EGPDSCCIDSDDN-LYVAMYGQGRVLVFNKRGY 264 (333)
T ss_dssp SEEEEE------EEEEEECCSS-SEEEEEEEBTTCC-EEEEEETTTEEEEECTTSC
T ss_pred Cccccc------ceEEEecCCC-CCCCceEECCCCC-EEEEEcCCCEEEEECCCCC
Confidence 00000 0111122222 3577899999998 6777777889999998644
No 181
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.59 E-value=1.6e-13 Score=137.55 Aligned_cols=251 Identities=8% Similarity=-0.086 Sum_probs=159.6
Q ss_pred cCCceeEEEecCCCCcEEEE----EeCCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCceeEEEecCCCCceEEEEeC
Q 014454 124 HDGEVNRARYMPQNPFLIAT----KTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSD 199 (424)
Q Consensus 124 h~~~v~~~~~~p~~~~~lat----g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~ 199 (424)
|...+..++|||+|+.++.+ |+.+..|++||+.+. .......+.. .....++|+|+++ .|+.++.
T Consensus 119 ~~~~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~tg--------~~~~~~~~~~--~~~~~~~wspDg~-~l~~~~~ 187 (695)
T 2bkl_A 119 GTVSLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVDSG--------EWSKVDVIEG--GKYATPKWTPDSK-GFYYEWL 187 (695)
T ss_dssp SCEEEEEEEECTTSSEEEEEEEETTCSCCEEEEEETTTC--------CBCSSCCBSC--CTTCCCEECTTSS-EEEEEEC
T ss_pred CCEEEEEEEECCCCCEEEEEECCCCCceEEEEEEECCCC--------CCcCCcccCc--ccccceEEecCCC-EEEEEEe
Confidence 44568899999999844333 333468999999872 1110001111 1126899999998 5777777
Q ss_pred CCc-------------EEEEeCCCCCCCCcccceeeeecCCccEeeEEEecCCCcEEEEEeCC-C--eEEEEEcCCCCCC
Q 014454 200 DAQ-------------ICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDD-Q--YLLIWDLRTPSVS 263 (424)
Q Consensus 200 dg~-------------i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~d-g--~i~i~d~~~~~~~ 263 (424)
|.. |++|++.++.... ..+.....+...+..+.|+|+++.++++...+ + .|.++|..++.
T Consensus 188 d~~~~~~~~~~~~~~~v~~~~l~t~~~~~--~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~l~~~~~~~~~-- 263 (695)
T 2bkl_A 188 PTDPSIKVDERPGYTTIRYHTLGTEPSKD--TVVHERTGDPTTFLQSDLSRDGKYLFVYILRGWSENDVYWKRPGEKD-- 263 (695)
T ss_dssp CCCTTSCGGGGGGGCEEEEEETTSCGGGC--EEEECCCCCTTCEEEEEECTTSCCEEEEEEETTTEEEEEEECTTCSS--
T ss_pred cCCCCCccccCCCCCEEEEEECCCCchhc--eEEEecCCCCEEEEEEEECCCCCEEEEEEeCCCCceEEEEEcCCCCc--
Confidence 765 9999998764211 11222233556788999999998876555443 3 56666544332
Q ss_pred CCeeeeeccCCCeeEEEecCCCCeEEEEEe---CCCcEEEEECCCCCC-cceEecCC--CCCEEEEEEcCCCCcEEEEEE
Q 014454 264 KPVQSVVAHQSEVNCLAFNPFNEWILATGS---TDKTVKLFDLRKIST-ALHTFDSH--KEEVFQVGWNPKNETILASCC 337 (424)
Q Consensus 264 ~~~~~~~~~~~~v~~v~~~~~~~~~l~tg~---~dg~i~iwd~~~~~~-~~~~~~~h--~~~v~~~~~sp~~~~~l~s~~ 337 (424)
...+..+...+....+ +++. +++.+. .++.|.+||+.+... ....+..+ ...+..++|+ ++ .++++..
T Consensus 264 --~~~l~~~~~~~~~~~~-~~g~-l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~l~~~~~~-~~-~lv~~~~ 337 (695)
T 2bkl_A 264 --FRLLVKGVGAKYEVHA-WKDR-FYVLTDEGAPRQRVFEVDPAKPARASWKEIVPEDSSASLLSVSIV-GG-HLSLEYL 337 (695)
T ss_dssp --CEEEEECSSCCEEEEE-ETTE-EEEEECTTCTTCEEEEEBTTBCSGGGCEEEECCCSSCEEEEEEEE-TT-EEEEEEE
T ss_pred --eEEeecCCCceEEEEe-cCCc-EEEEECCCCCCCEEEEEeCCCCCccCCeEEecCCCCCeEEEEEEE-CC-EEEEEEE
Confidence 3444455556666666 5666 666655 357899999976321 12333333 4467888998 44 5888999
Q ss_pred CCCeEEEeeCCCCCcccCCCCcCCCCCeeeEEEcCC-CCCcceEEeCCCCCcEEEEEe---CCCcEEEEecCCcc
Q 014454 338 LGRRLMVWDLSRIDEEQTPEDAEDGPPELLFIHGGH-TSKISDFSWNPCEDWVISSVA---EDNILQIWQMAENI 408 (424)
Q Consensus 338 ~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h-~~~v~~~~~~~~~~~~l~s~~---~dg~i~vw~~~~~~ 408 (424)
.|+..+||.+.... .....+..+ ...+..++++|+++.++++.+ ..+.|++||+.++.
T Consensus 338 ~dg~~~l~~~~~~g-------------~~~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~v~~~d~~~g~ 399 (695)
T 2bkl_A 338 KDATSEVRVATLKG-------------KPVRTVQLPGVGAASNLMGLEDLDDAYYVFTSFTTPRQIYKTSVSTGK 399 (695)
T ss_dssp ETTEEEEEEEETTC-------------CEEEECCCSSSSEECCCBSCTTCSEEEEEEEETTEEEEEEEEETTTCC
T ss_pred ECCEEEEEEEeCCC-------------CeeEEecCCCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCCc
Confidence 99998888765211 122333333 556788899999885555544 34689999998764
No 182
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.57 E-value=1.5e-12 Score=119.66 Aligned_cols=222 Identities=11% Similarity=0.065 Sum_probs=137.4
Q ss_pred EEEecCCCCcEEEEEe---------CCCeEEEEeCCCCCCCCCCCCCCCCcEEEec------CCCceeEEEecCCCCceE
Q 014454 130 RARYMPQNPFLIATKT---------VSAEVYVFDYSKHPSKPPLDGACSPDLRLRG------HSTEGYGLSWSKFKEGHL 194 (424)
Q Consensus 130 ~~~~~p~~~~~latg~---------~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~------h~~~v~~l~~~~~~~~~l 194 (424)
.++|+|+++.+.++.. .++.|.+||..+ .+....+.. +......++++|+++ +|
T Consensus 54 ~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t----------~~~~~~i~~~~~~~~~g~~p~~i~~spdg~-~l 122 (361)
T 2oiz_A 54 HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADK----------LTFEKEISLPPKRVQGLNYDGLFRQTTDGK-FI 122 (361)
T ss_dssp EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTT----------CCEEEEEEECTTBCCBCCCGGGEEECTTSS-EE
T ss_pred ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcC----------CcEEEEEEcCccccccCCCcceEEECCCCC-EE
Confidence 8999999985444432 367899999876 344444442 234567899999998 56
Q ss_pred EEEeC--CCcEEEEeCCCCCCCCcccceeeeecCCccEeeEEEecCCCcEEEEEeCCCeEEEE-----------------
Q 014454 195 LSGSD--DAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIW----------------- 255 (424)
Q Consensus 195 ~s~~~--dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~dg~i~i~----------------- 255 (424)
+++.. +++|.+||+.+.+....+ +. .. ....+.+.|.+...+++.+.||.+.+|
T Consensus 123 ~v~n~~~~~~v~v~d~~~~~~~~~~-----i~-~~-~~~~v~~~p~~~~~~~~~~~dg~~~~v~~~~~g~~~~~~~~~~~ 195 (361)
T 2oiz_A 123 VLQNASPATSIGIVDVAKGDYVEDV-----TA-AA-GCWSVIPQPNRPRSFMTICGDGGLLTINLGEDGKVASQSRSKQM 195 (361)
T ss_dssp EEEEESSSEEEEEEETTTTEEEEEE-----GG-GT-TEEEEEECTTSSSEEEEEETTSSEEEEEECTTSSEEEEEECCCC
T ss_pred EEECCCCCCeEEEEECCCCcEEEEE-----ec-CC-CcceeEEcCCCCeeEEEECCCCcEEEEEECCCCcEeeeccccce
Confidence 66653 689999999876332210 11 11 111123334333333344444444444
Q ss_pred -------------------------------EcCCCCCCCCeeeeec------c----CCCeeEEEecCCCCeEEEEEeC
Q 014454 256 -------------------------------DLRTPSVSKPVQSVVA------H----QSEVNCLAFNPFNEWILATGST 294 (424)
Q Consensus 256 -------------------------------d~~~~~~~~~~~~~~~------~----~~~v~~v~~~~~~~~~l~tg~~ 294 (424)
|+..... ..+..+.. + ......++|+|++..++++...
T Consensus 196 ~~~~~~~~~~~~~~~g~~~~~~~~~~~v~v~d~~~~~~-~~~~~~~~~~~~~~~~~~~p~g~~~~a~~~dg~~lyv~~~~ 274 (361)
T 2oiz_A 196 FSVKDDPIFIAPALDKDKAHFVSYYGNVYSADFSGDEV-KVDGPWSLLNDEDKAKNWVPGGYNLVGLHRASGRMYVFMHP 274 (361)
T ss_dssp SCTTTSCBCSCCEECSSEEEEEBTTSEEEEEECSSSSC-EEEEEEESCCHHHHHTTCEECCSSCEEEETTTTEEEEEEES
T ss_pred EcCCCCceEEEecccCCEEEEEeCCCeEEEEEecCCCc-eecccccccCccccccccccCCeeEEEEecCCCeEEEEEcc
Confidence 4432211 00000000 0 0111226889998876665541
Q ss_pred ----------CCcEEEEECCCCCCcceEecCCCCCEEEEEEcCCCCcEEEEEECCCeEEEeeCCCCCcccCCCCcCCCCC
Q 014454 295 ----------DKTVKLFDLRKISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPEDAEDGPP 364 (424)
Q Consensus 295 ----------dg~i~iwd~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~ 364 (424)
.+.|.+||+.+ .+.+.++..+. +.+++|+|+++ +|++++. +.|.+||..++..
T Consensus 275 ~~~~~~~~~~~~~v~viD~~t-~~~v~~i~~~~--p~~ia~spdg~-~l~v~n~-~~v~v~D~~t~~l------------ 337 (361)
T 2oiz_A 275 DGKEGTHKFPAAEIWVMDTKT-KQRVARIPGRD--ALSMTIDQQRN-LMLTLDG-GNVNVYDISQPEP------------ 337 (361)
T ss_dssp SCCTTCTTCCCSEEEEEETTT-TEEEEEEECTT--CCEEEEETTTT-EEEEECS-SCEEEEECSSSSC------------
T ss_pred CCCcccccCCCceEEEEECCC-CcEEEEEecCC--eeEEEECCCCC-EEEEeCC-CeEEEEECCCCcc------------
Confidence 34899999998 67888888776 99999999997 5666666 9999999987521
Q ss_pred eeeEEEcCCCCCcceEEeCCCCC
Q 014454 365 ELLFIHGGHTSKISDFSWNPCED 387 (424)
Q Consensus 365 ~~~~~~~~h~~~v~~~~~~~~~~ 387 (424)
+++..+..+......++++|+|.
T Consensus 338 ~~~~~i~~~G~~P~~~~~~p~G~ 360 (361)
T 2oiz_A 338 KLLRTIEGAAEASLQVQFHPVGG 360 (361)
T ss_dssp EEEEEETTSCSSEEEEEECCCSC
T ss_pred eeeEEeccCCCCcEEEEecCCCC
Confidence 44555555566678899999986
No 183
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.57 E-value=1.4e-12 Score=118.26 Aligned_cols=201 Identities=10% Similarity=0.093 Sum_probs=146.5
Q ss_pred cCCceeEEEecCCCCcEEEEEeCCCeEEEEeCCCCCCCCCCCCCCCCcEEE---------ecCCCceeEEEecC-CCCce
Q 014454 124 HDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRL---------RGHSTEGYGLSWSK-FKEGH 193 (424)
Q Consensus 124 h~~~v~~~~~~p~~~~~latg~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~---------~~h~~~v~~l~~~~-~~~~~ 193 (424)
+-..+..++++|++. ++++...++.|++|+.... ......+ .++-....+|+++| ++. +
T Consensus 89 ~~~~p~gia~d~~g~-l~v~d~~~~~v~~~~~~g~---------~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~-l 157 (329)
T 3fvz_A 89 LFYLPHGLSIDTDGN-YWVTDVALHQVFKLDPHSK---------EGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGA-V 157 (329)
T ss_dssp TCSSEEEEEECTTSC-EEEEETTTTEEEEECTTCS---------SCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCC-E
T ss_pred ccCCceEEEECCCCC-EEEEECCCCEEEEEeCCCC---------eEEEEEecccCCCCCCccccCCCcEEEEeCCCCe-E
Confidence 445789999999887 8888888999999998651 1123333 23445689999999 555 6
Q ss_pred EEEEe-CCCcEEEEeCCCCCCCCcccceeeeec----------CCccEeeEEEecCCCcEEEEEeCCCeEEEEEcCCCCC
Q 014454 194 LLSGS-DDAQICLWDINAAPKNKSLEAMQIFKV----------HEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSV 262 (424)
Q Consensus 194 l~s~~-~dg~i~iwd~~~~~~~~~~~~~~~~~~----------~~~~v~~~~~~~~~~~~~~s~~~dg~i~i~d~~~~~~ 262 (424)
+++.+ .++.|++|+.. +. .+..+.. +-.....|+++|++..++++...++.|++||..+++.
T Consensus 158 yv~d~~~~~~I~~~~~~-g~------~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~ 230 (329)
T 3fvz_A 158 FVSDGYCNSRIVQFSPS-GK------FVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEF 230 (329)
T ss_dssp EEEECSSCCEEEEECTT-SC------EEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCCE
T ss_pred EEEeCCCCCeEEEEcCC-CC------EEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCcE
Confidence 66665 68999999953 21 1222211 2234789999999667888888999999999986553
Q ss_pred CCCeeee--eccCCCeeEEEecCCCCeEEEEEe-------CCCcEEEEECCCCCCcceEec---CCCCCEEEEEEcCCCC
Q 014454 263 SKPVQSV--VAHQSEVNCLAFNPFNEWILATGS-------TDKTVKLFDLRKISTALHTFD---SHKEEVFQVGWNPKNE 330 (424)
Q Consensus 263 ~~~~~~~--~~~~~~v~~v~~~~~~~~~l~tg~-------~dg~i~iwd~~~~~~~~~~~~---~h~~~v~~~~~sp~~~ 330 (424)
+..+ ..+...+.+++|+| +- ++++.+ .+..|++||+.+ ++.+..+. .+...+..++++|+|
T Consensus 231 ---~~~~~~~~~~~~~~~~~~~p-g~-~~~~~g~~~v~~~~~~~v~~~~~~~-g~~~~~~~~~~~~~~~p~~ia~~~dG- 303 (329)
T 3fvz_A 231 ---VREIKHASFGRNVFAISYIP-GF-LFAVNGKPYFGDQEPVQGFVMNFSS-GEIIDVFKPVRKHFDMPHDIVASEDG- 303 (329)
T ss_dssp ---EEEECCTTTTTCEEEEEEET-TE-EEEEECCCCTTCSCCCCEEEEETTT-CCEEEEECCSSSCCSSEEEEEECTTS-
T ss_pred ---EEEEeccccCCCcceeeecC-CE-EEEeCCCEEeccCCCcEEEEEEcCC-CeEEEEEcCCCCccCCeeEEEECCCC-
Confidence 3443 34566788999999 32 344333 345899999987 67777763 566789999999999
Q ss_pred cEEEEEECCCeEEEeeCCC
Q 014454 331 TILASCCLGRRLMVWDLSR 349 (424)
Q Consensus 331 ~~l~s~~~dg~i~iwd~~~ 349 (424)
.++++...++.|++|++..
T Consensus 304 ~lyvad~~~~~I~~~~~~~ 322 (329)
T 3fvz_A 304 TVYIGDAHTNTVWKFTLTE 322 (329)
T ss_dssp EEEEEESSSCCEEEEEEEE
T ss_pred CEEEEECCCCEEEEEeCCc
Confidence 6888988999999999864
No 184
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.57 E-value=8.1e-12 Score=120.86 Aligned_cols=269 Identities=8% Similarity=0.045 Sum_probs=176.3
Q ss_pred EEEEeccCCceeEEEecCCCCcEEEEEeCCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCceeEEEec----CCCCce
Q 014454 118 IIQQINHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWS----KFKEGH 193 (424)
Q Consensus 118 ~~~~~~h~~~v~~~~~~p~~~~~latg~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~----~~~~~~ 193 (424)
++.++.....+..++|+|+++ ++.+++.++.|.+||+.. ...+....+.. ......++|+ |+|+.+
T Consensus 189 v~~~i~~g~~p~~v~~SpDGr-~lyv~~~dg~V~viD~~~--------~t~~~v~~i~~-G~~P~~ia~s~~~~pDGk~l 258 (567)
T 1qks_A 189 IKTVLDTGYAVHISRLSASGR-YLFVIGRDGKVNMIDLWM--------KEPTTVAEIKI-GSEARSIETSKMEGWEDKYA 258 (567)
T ss_dssp EEEEEECSSCEEEEEECTTSC-EEEEEETTSEEEEEETTS--------SSCCEEEEEEC-CSEEEEEEECCSTTCTTTEE
T ss_pred EEEEEeCCCCccceEECCCCC-EEEEEcCCCeEEEEECCC--------CCCcEeEEEec-CCCCceeEEccccCCCCCEE
Confidence 344556666778999999997 566677899999999951 01344455553 3356799999 688854
Q ss_pred EEEEeCCCcEEEEeCCCCCCCCcccceee-e---ecCCc-cEeeEEEecCCCcEEEEEeCCCeEEEEEcCCCCCCCCeee
Q 014454 194 LLSGSDDAQICLWDINAAPKNKSLEAMQI-F---KVHEG-VVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQS 268 (424)
Q Consensus 194 l~s~~~dg~i~iwd~~~~~~~~~~~~~~~-~---~~~~~-~v~~~~~~~~~~~~~~s~~~dg~i~i~d~~~~~~~~~~~~ 268 (424)
+++...++.|.++|..+.+....+..... . ..|.. .+..+..+++++.+++....+|.|.++|....... .+..
T Consensus 259 ~v~n~~~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~g~v~~vd~~~~~~~-~v~~ 337 (567)
T 1qks_A 259 IAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKILLVDYTDLNNL-KTTE 337 (567)
T ss_dssp EEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEETTCSSEE-EEEE
T ss_pred EEEEccCCeEEEEECCCCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEecCCCeEEEEecCCCccc-eeee
Confidence 55555679999999876543222211000 0 01222 67888889988878878888899999999775421 1222
Q ss_pred eeccCCCeeEEEecCCCCeEEEEEeCCCcEEEEECCCCCCcceEecC-----CCCCEEEEEEcCCCCcEEEEEE-CCCeE
Q 014454 269 VVAHQSEVNCLAFNPFNEWILATGSTDKTVKLFDLRKISTALHTFDS-----HKEEVFQVGWNPKNETILASCC-LGRRL 342 (424)
Q Consensus 269 ~~~~~~~v~~v~~~~~~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~~-----h~~~v~~~~~sp~~~~~l~s~~-~dg~i 342 (424)
+ ........+.|+|++++++++...++.|.++|+.+ ++.+..+.. |.+.-..+ ++|++..+++++. .++.|
T Consensus 338 i-~~~~~~~d~~~~pdgr~~~va~~~sn~V~ViD~~t-~kl~~~i~vgg~~Phpg~g~~~-~~p~~g~v~~t~~~g~~~V 414 (567)
T 1qks_A 338 I-SAERFLHDGGLDGSHRYFITAANARNKLVVIDTKE-GKLVAIEDTGGQTPHPGRGANF-VHPTFGPVWATSHMGDDSV 414 (567)
T ss_dssp E-ECCSSEEEEEECTTSCEEEEEEGGGTEEEEEETTT-TEEEEEEECSSSSBCCTTCEEE-EETTTEEEEEEEBSSSSEE
T ss_pred e-eccccccCceECCCCCEEEEEeCCCCeEEEEECCC-CcEEEEEeccCcCCCCccceee-ECCCCCcEEEeCCCCCCeE
Confidence 2 23456778999999998777777789999999998 555554443 33222222 5887555666664 46899
Q ss_pred EEeeCCCCCcccCCCCcCCCCCeeeEEEcCCCCCcceEEeCCCCCcEEEEEeC------CCcEEEEecCCc
Q 014454 343 MVWDLSRIDEEQTPEDAEDGPPELLFIHGGHTSKISDFSWNPCEDWVISSVAE------DNILQIWQMAEN 407 (424)
Q Consensus 343 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~------dg~i~vw~~~~~ 407 (424)
.++|........ ...+.+..+......-..+..+|+++++.++... .+.|.|+|+.+.
T Consensus 415 svid~~~~~~~~-------~~~kvv~~i~~~g~g~~~i~~~p~~~~l~v~~~~~~~~~~~~~v~v~d~~~~ 478 (567)
T 1qks_A 415 ALIGTDPEGHPD-------NAWKILDSFPALGGGSLFIKTHPNSQYLYVDATLNPEAEISGSVAVFDIKAM 478 (567)
T ss_dssp EEEECCTTTCTT-------TBTSEEEEEECSCSCCCCEECCTTCSEEEEECTTCSSHHHHTCEEEEEGGGC
T ss_pred EEecCCCCCCcc-------ccCEEEEEEecCCCCCEEEEeCCCCCeEEEecCCCCCcccCceEEEEECCcc
Confidence 999987632110 0124455555443334568899999976655421 458999999875
No 185
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.56 E-value=1.4e-11 Score=109.64 Aligned_cols=242 Identities=6% Similarity=-0.040 Sum_probs=163.4
Q ss_pred ccCCceeEEEecCCCCcEEEEEeCCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCceeEEEecCCCCceEEEEeCCCc
Q 014454 123 NHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDDAQ 202 (424)
Q Consensus 123 ~h~~~v~~~~~~p~~~~~latg~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~ 202 (424)
.+...+.++++.+++. +.++...++.|.+|+... ......+..+...+.++++.+++. ++++...++.
T Consensus 12 ~~~~~~~~i~~d~~g~-l~v~~~~~~~v~~~d~~~----------~~~~~~~~~~~~~~~~i~~~~~g~-l~v~~~~~~~ 79 (299)
T 2z2n_A 12 NQDTGPYGITVSDKGK-VWITQHKANMISCINLDG----------KITEYPLPTPDAKVMCLTISSDGE-VWFTENAANK 79 (299)
T ss_dssp SSSCCEEEEEECTTSC-EEEEETTTTEEEEECTTC----------CEEEEECSSTTCCEEEEEECTTSC-EEEEETTTTE
T ss_pred CcCCCccceEECCCCC-EEEEecCCCcEEEEcCCC----------CeEEecCCcccCceeeEEECCCCC-EEEeCCCCCe
Confidence 3456889999999886 566555578999999763 110111123456789999999876 5666666888
Q ss_pred EEEEeCCCCCCCCcccceeeeecCCccEeeEEEecCCCcEEEEEeCCCeEEEEEcCCCCCCCCeeeeeccCCCeeEEEec
Q 014454 203 ICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFN 282 (424)
Q Consensus 203 i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~v~~~ 282 (424)
|..|+.... +... ........+..+++.+++. ++++...++.|.+||. ++.. ...........+..++++
T Consensus 80 i~~~~~~g~-----~~~~-~~~~~~~~~~~i~~~~~g~-l~v~~~~~~~i~~~d~-~g~~--~~~~~~~~~~~~~~i~~~ 149 (299)
T 2z2n_A 80 IGRITKKGI-----IKEY-TLPNPDSAPYGITEGPNGD-IWFTEMNGNRIGRITD-DGKI--REYELPNKGSYPSFITLG 149 (299)
T ss_dssp EEEECTTSC-----EEEE-ECSSTTCCEEEEEECTTSC-EEEEETTTTEEEEECT-TCCE--EEEECSSTTCCEEEEEEC
T ss_pred EEEECCCCc-----EEEE-eCCCcCCCceeeEECCCCC-EEEEecCCceEEEECC-CCCE--EEecCCCCCCCCceEEEc
Confidence 999997521 1111 1112345788999999875 6666667889999998 4331 111122244578999999
Q ss_pred CCCCeEEEEEeCCCcEEEEECCCCCCcceE-ecCCCCCEEEEEEcCCCCcEEEEEECCCeEEEeeCCCCCcccCCCCcCC
Q 014454 283 PFNEWILATGSTDKTVKLFDLRKISTALHT-FDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPEDAED 361 (424)
Q Consensus 283 ~~~~~~l~tg~~dg~i~iwd~~~~~~~~~~-~~~h~~~v~~~~~sp~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~ 361 (424)
+++. ++++...++.|..||. + +..... ...+...+.++++++++. ++++...++.|.+||. .+.
T Consensus 150 ~~g~-l~v~~~~~~~i~~~~~-~-g~~~~~~~~~~~~~~~~i~~~~~g~-l~v~~~~~~~i~~~~~-~g~---------- 214 (299)
T 2z2n_A 150 SDNA-LWFTENQNNAIGRITE-S-GDITEFKIPTPASGPVGITKGNDDA-LWFVEIIGNKIGRITT-SGE---------- 214 (299)
T ss_dssp TTSC-EEEEETTTTEEEEECT-T-CCEEEEECSSTTCCEEEEEECTTSS-EEEEETTTTEEEEECT-TCC----------
T ss_pred CCCC-EEEEeCCCCEEEEEcC-C-CcEEEeeCCCCCCcceeEEECCCCC-EEEEccCCceEEEECC-CCc----------
Confidence 9886 6666666789999998 4 333222 333456788999999985 6666666788999998 432
Q ss_pred CCCeeeEEEcCCCCCcceEEeCCCCCcEEEEEeCCCcEEEEecC
Q 014454 362 GPPELLFIHGGHTSKISDFSWNPCEDWVISSVAEDNILQIWQMA 405 (424)
Q Consensus 362 ~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~vw~~~ 405 (424)
........+...+.++++++++. ++++...++.|.+|+..
T Consensus 215 ---~~~~~~~~~~~~~~~i~~~~~g~-l~v~~~~~~~i~~~d~~ 254 (299)
T 2z2n_A 215 ---ITEFKIPTPNARPHAITAGAGID-LWFTEWGANKIGRLTSN 254 (299)
T ss_dssp ---EEEEECSSTTCCEEEEEECSTTC-EEEEETTTTEEEEEETT
T ss_pred ---EEEEECCCCCCCceeEEECCCCC-EEEeccCCceEEEECCC
Confidence 11122233455688999999998 67776677889999984
No 186
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.54 E-value=2.2e-12 Score=117.00 Aligned_cols=237 Identities=12% Similarity=0.053 Sum_probs=158.7
Q ss_pred ceeEEEecCCCCcEEEEEeCCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCceeEEEecCCCCceEEEEeCCCcEEEE
Q 014454 127 EVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDDAQICLW 206 (424)
Q Consensus 127 ~v~~~~~~p~~~~~latg~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~iw 206 (424)
....+.+.. ..++++...++.|.+||..+ .+...++. .......+++++++. ++++...++.|.+|
T Consensus 45 ~~~~i~~~~--~~lyv~~~~~~~v~viD~~t----------~~~~~~i~-~~~~p~~i~~~~~g~-lyv~~~~~~~v~~i 110 (328)
T 3dsm_A 45 VAQSMVIRD--GIGWIVVNNSHVIFAIDINT----------FKEVGRIT-GFTSPRYIHFLSDEK-AYVTQIWDYRIFII 110 (328)
T ss_dssp CEEEEEEET--TEEEEEEGGGTEEEEEETTT----------CCEEEEEE-CCSSEEEEEEEETTE-EEEEEBSCSEEEEE
T ss_pred cceEEEEEC--CEEEEEEcCCCEEEEEECcc----------cEEEEEcC-CCCCCcEEEEeCCCe-EEEEECCCCeEEEE
Confidence 345677643 34677777789999999987 34445554 456788999988773 44444478999999
Q ss_pred eCCCCCCCCcccceeeeecCC-----ccEeeEEEecCCCcEEEEEe-CCCeEEEEEcCCCCCCCCeeeeeccCCCeeEEE
Q 014454 207 DINAAPKNKSLEAMQIFKVHE-----GVVEDVAWHLRHEYLFGSVG-DDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLA 280 (424)
Q Consensus 207 d~~~~~~~~~~~~~~~~~~~~-----~~v~~~~~~~~~~~~~~s~~-~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~v~ 280 (424)
|+.+.+. ...+.... .....+++ ++..++++.. .++.|.++|+.+++. +..+.. ......++
T Consensus 111 D~~t~~~------~~~i~~g~~~~~~~~p~~i~~--~~~~lyv~~~~~~~~v~viD~~t~~~---~~~i~~-g~~p~~i~ 178 (328)
T 3dsm_A 111 NPKTYEI------TGYIECPDMDMESGSTEQMVQ--YGKYVYVNCWSYQNRILKIDTETDKV---VDELTI-GIQPTSLV 178 (328)
T ss_dssp ETTTTEE------EEEEECTTCCTTTCBCCCEEE--ETTEEEEEECTTCCEEEEEETTTTEE---EEEEEC-SSCBCCCE
T ss_pred ECCCCeE------EEEEEcCCccccCCCcceEEE--ECCEEEEEcCCCCCEEEEEECCCCeE---EEEEEc-CCCccceE
Confidence 9987632 22222111 15567777 3556776655 489999999998663 333332 33467889
Q ss_pred ecCCCCeEEEEEeCC----------CcEEEEECCCCCCcceEecCC-CCCEEEEEEcCCCCcEEEEEECCCeEEEeeCCC
Q 014454 281 FNPFNEWILATGSTD----------KTVKLFDLRKISTALHTFDSH-KEEVFQVGWNPKNETILASCCLGRRLMVWDLSR 349 (424)
Q Consensus 281 ~~~~~~~~l~tg~~d----------g~i~iwd~~~~~~~~~~~~~h-~~~v~~~~~sp~~~~~l~s~~~dg~i~iwd~~~ 349 (424)
++|+|+ +++++..+ +.|.++|..+ .+....+... ......++|+|+++. |+++.. .|.+||..+
T Consensus 179 ~~~dG~-l~v~~~~~~~~~~~~~~~~~v~~id~~t-~~v~~~~~~~~g~~p~~la~~~d~~~-lyv~~~--~v~~~d~~t 253 (328)
T 3dsm_A 179 MDKYNK-MWTITDGGYEGSPYGYEAPSLYRIDAET-FTVEKQFKFKLGDWPSEVQLNGTRDT-LYWINN--DIWRMPVEA 253 (328)
T ss_dssp ECTTSE-EEEEBCCBCTTCSSCBCCCEEEEEETTT-TEEEEEEECCTTCCCEEEEECTTSCE-EEEESS--SEEEEETTC
T ss_pred EcCCCC-EEEEECCCccCCccccCCceEEEEECCC-CeEEEEEecCCCCCceeEEEecCCCE-EEEEcc--EEEEEECCC
Confidence 999887 56555444 7899999987 5555555432 346899999999875 444433 799999976
Q ss_pred CCcccCCCCcCCCCCeeeEEEcCCCCCcceEEeCCCCCcEEEEE----eCCCcEEEEecCC
Q 014454 350 IDEEQTPEDAEDGPPELLFIHGGHTSKISDFSWNPCEDWVISSV----AEDNILQIWQMAE 406 (424)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~----~~dg~i~vw~~~~ 406 (424)
+..... .. ...+......++++|++..++++. ..++.|.+|+...
T Consensus 254 ~~~~~~---------~~---~~~~~~~p~gi~vdp~~g~lyva~~~~y~~~~~V~v~d~~g 302 (328)
T 3dsm_A 254 DRVPVR---------PF---LEFRDTKYYGLTVNPNNGEVYVADAIDYQQQGIVYRYSPQG 302 (328)
T ss_dssp SSCCSS---------CS---BCCCSSCEEEEEECTTTCCEEEEECTTSSSEEEEEEECTTC
T ss_pred Cceeee---------ee---ecCCCCceEEEEEcCCCCeEEEEcccccccCCEEEEECCCC
Confidence 542110 00 011134578899999655578887 6789999999983
No 187
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.54 E-value=2.6e-12 Score=114.01 Aligned_cols=206 Identities=16% Similarity=0.140 Sum_probs=141.7
Q ss_pred CCCceeEEEecCCCCceEEEEeCCCcEEEEeCCCCCCCCcccceeeeecCCccEeeEEEecCCCcEEEEEeC-CCeEEEE
Q 014454 177 HSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGD-DQYLLIW 255 (424)
Q Consensus 177 h~~~v~~l~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~-dg~i~i~ 255 (424)
+-..+.++++++++. ++++...++.|.+||.... ....+........+...+..+++.+.+..++++... ++.|.+|
T Consensus 28 ~~~~p~~v~~~~~g~-l~v~~~~~~~i~~~d~~g~-~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~~~~~i~~~ 105 (286)
T 1q7f_A 28 QFTEPSGVAVNAQND-IIVADTNNHRIQIFDKEGR-FKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQIQIY 105 (286)
T ss_dssp CBSCEEEEEECTTCC-EEEEEGGGTEEEEECTTSC-EEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGGGCEEEEE
T ss_pred ccCCCceEEECCCCC-EEEEECCCCEEEEECCCCc-EEEEecccCCCcccccCceEEEEEcCCCeEEEEcCCCCCEEEEE
Confidence 445688999999886 7777788999999998632 111110000001234578899995434456656543 8899999
Q ss_pred EcCCCCCCCCeeeee-ccCCCeeEEEecCCCCeEEEEEeCCCcEEEEECCCCCCcceEec--CCCCCEEEEEEcCCCCcE
Q 014454 256 DLRTPSVSKPVQSVV-AHQSEVNCLAFNPFNEWILATGSTDKTVKLFDLRKISTALHTFD--SHKEEVFQVGWNPKNETI 332 (424)
Q Consensus 256 d~~~~~~~~~~~~~~-~~~~~v~~v~~~~~~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~--~h~~~v~~~~~sp~~~~~ 332 (424)
|. ++.. +..+. .+...+..++++|++. ++++...++.|.+||.. +..+..+. .+...+..++++|++. +
T Consensus 106 d~-~g~~---~~~~~~~~~~~~~~i~~~~~g~-l~v~~~~~~~i~~~~~~--g~~~~~~~~~~~~~~p~~i~~~~~g~-l 177 (286)
T 1q7f_A 106 NQ-YGQF---VRKFGATILQHPRGVTVDNKGR-IIVVECKVMRVIIFDQN--GNVLHKFGCSKHLEFPNGVVVNDKQE-I 177 (286)
T ss_dssp CT-TSCE---EEEECTTTCSCEEEEEECTTSC-EEEEETTTTEEEEECTT--SCEEEEEECTTTCSSEEEEEECSSSE-E
T ss_pred CC-CCcE---EEEecCccCCCceEEEEeCCCC-EEEEECCCCEEEEEcCC--CCEEEEeCCCCccCCcEEEEECCCCC-E
Confidence 94 4332 33332 2345789999999987 77777778999999965 34455553 3445789999999985 7
Q ss_pred EEEEECCCeEEEeeCCCCCcccCCCCcCCCCCeeeEEEcC--CCCCcceEEeCCCCCcEEEEEeCCC-cEEEEecCCcc
Q 014454 333 LASCCLGRRLMVWDLSRIDEEQTPEDAEDGPPELLFIHGG--HTSKISDFSWNPCEDWVISSVAEDN-ILQIWQMAENI 408 (424)
Q Consensus 333 l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~--h~~~v~~~~~~~~~~~~l~s~~~dg-~i~vw~~~~~~ 408 (424)
+++...++.|++||... ..+..+.. +...+..+++++++. ++++...++ .|.+|+.....
T Consensus 178 ~v~~~~~~~i~~~~~~g---------------~~~~~~~~~g~~~~p~~i~~d~~G~-l~v~~~~~~~~i~~~~~~g~~ 240 (286)
T 1q7f_A 178 FISDNRAHCVKVFNYEG---------------QYLRQIGGEGITNYPIGVGINSNGE-ILIADNHNNFNLTIFTQDGQL 240 (286)
T ss_dssp EEEEGGGTEEEEEETTC---------------CEEEEESCTTTSCSEEEEEECTTCC-EEEEECSSSCEEEEECTTSCE
T ss_pred EEEECCCCEEEEEcCCC---------------CEEEEEccCCccCCCcEEEECCCCC-EEEEeCCCCEEEEEECCCCCE
Confidence 77777889999999753 23333432 235688999999998 788877775 99999976543
No 188
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.53 E-value=1.6e-12 Score=118.66 Aligned_cols=224 Identities=9% Similarity=0.098 Sum_probs=138.2
Q ss_pred CceeEEEecCCCCcEEEEE--------eCCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCceeEEEecCCCCceEEEE
Q 014454 126 GEVNRARYMPQNPFLIATK--------TVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSG 197 (424)
Q Consensus 126 ~~v~~~~~~p~~~~~latg--------~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~ 197 (424)
..+..+++ +|+.++.+. ..++.|++|++.. .. ...+ ..+..++|+|+|. .|+.+
T Consensus 15 ~~~~~~~~--dG~~i~~~~~~~~~~~~~~~~~l~~~d~~~----------~~-~~~l----~~~~~~~~SpDg~-~la~~ 76 (347)
T 2gop_A 15 AYLSDPRT--KGELVAYVLTKANLKDNKYENTIVIENLKN----------NA-RRFI----ENATMPRISPDGK-KIAFM 76 (347)
T ss_dssp CEEEEEEE--ETTEEEEEEEEEETTTTEEEEEEEEEETTT----------CC-EEEE----ESCEEEEECTTSS-EEEEE
T ss_pred EEcccceE--CCcEEEEEEeecCcccCCccceEEEEeCCC----------Cc-eEEc----ccCCCeEECCCCC-EEEEE
Confidence 45566677 676444432 2256899999876 11 2233 4578899999998 56665
Q ss_pred eCC---C--cEEEEeCCCCCCCCcccceeeeecCCccEeeEEEecCCCcEEEEEeC------------------------
Q 014454 198 SDD---A--QICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGD------------------------ 248 (424)
Q Consensus 198 ~~d---g--~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~------------------------ 248 (424)
+.+ + .|.+|++.++. ... +..+.. +..++|+|+++.++.+...
T Consensus 77 ~~~~~~~~~~l~~~~~~~g~------~~~-l~~~~~-~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 148 (347)
T 2gop_A 77 RANEEKKVSEIWVADLETLS------SKK-ILEAKN-IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFD 148 (347)
T ss_dssp EEETTTTEEEEEEEETTTTE------EEE-EEEESE-EEEEEECTTSSEEEEEEECCCC---------CCCC--------
T ss_pred EeccCCCcceEEEEECCCCc------eEE-EEcCCC-ccceeECCCCCEEEEEEccCCCcCCcEEEcccceeecCccccc
Confidence 543 3 37777886542 112 222334 9999999999876654432
Q ss_pred --CCeEEEEEcCCCCCCCCeeeeeccCCCeeEEEecCCCCeEEEEEeCCC-------cEEEEECCCCCCcceEecCCCCC
Q 014454 249 --DQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATGSTDK-------TVKLFDLRKISTALHTFDSHKEE 319 (424)
Q Consensus 249 --dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~l~tg~~dg-------~i~iwd~~~~~~~~~~~~~h~~~ 319 (424)
...|.+||+.++.. +..+.. . .+..++|+|++ +++++..++ ...||.+.+ +. ...+..+ ..
T Consensus 149 ~~~~~l~~~d~~~~~~---~~~l~~-~-~~~~~~~spdg--~~~~~~~~~~~~~~~~~~~l~~~d~-~~-~~~l~~~-~~ 218 (347)
T 2gop_A 149 GEKTTFWIFDTESEEV---IEEFEK-P-RFSSGIWHRDK--IVVNVPHREIIPQYFKFWDIYIWED-GK-EEKMFEK-VS 218 (347)
T ss_dssp -CEEEEEEEETTTTEE---EEEEEE-E-TTCEEEEETTE--EEEEEECCCSSCCSSCCEEEEEEET-TE-EEEEEEE-ES
T ss_pred CccceEEEEECCCCeE---EeeecC-C-CcccccCCCCe--EEEEEecccccccccccccEEEeCC-Cc-eEEeccC-cc
Confidence 25789999987652 133333 3 78899999998 566665542 344444443 33 3333334 45
Q ss_pred EEEEEEcCCCCcEEEEEECC-------CeEEEeeCCCCCcccCCCCcCCCCCeeeEEEcCCCCCcce-EEeCCCCCcEEE
Q 014454 320 VFQVGWNPKNETILASCCLG-------RRLMVWDLSRIDEEQTPEDAEDGPPELLFIHGGHTSKISD-FSWNPCEDWVIS 391 (424)
Q Consensus 320 v~~~~~sp~~~~~l~s~~~d-------g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~-~~~~~~~~~~l~ 391 (424)
+..+ +|+|+.+++++..+ ..|.+|| .+ .......+|...+.. +.|+ ++ +++
T Consensus 219 ~~~~--spdg~~l~~~~~~~~~~~~~~~~l~~~d--~~--------------~~~~l~~~~~~~~~~~~~~s-dg--~~~ 277 (347)
T 2gop_A 219 FYAV--DSDGERILLYGKPEKKYMSEHNKLYIYD--GK--------------EVMGILDEVDRGVGQAKIKD-GK--VYF 277 (347)
T ss_dssp EEEE--EECSSCEEEEECCSSSCCCSSCEEEEEC--SS--------------CEEESSTTCCSEEEEEEEET-TE--EEE
T ss_pred eeeE--CCCCCEEEEEEccccCCccccceEEEEC--CC--------------ceEeccccCCcccCCccEEc-Cc--EEE
Confidence 5544 99997544444332 4677887 32 112222345556776 8999 76 788
Q ss_pred EEeCCCcEEEEecCCc
Q 014454 392 SVAEDNILQIWQMAEN 407 (424)
Q Consensus 392 s~~~dg~i~vw~~~~~ 407 (424)
+++.++.++|| +.++
T Consensus 278 ~~~~~~~~~l~-~~~g 292 (347)
T 2gop_A 278 TLFEEGSVNLY-IWDG 292 (347)
T ss_dssp EEEETTEEEEE-EESS
T ss_pred EEecCCcEEEE-EcCC
Confidence 88999999999 8743
No 189
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.53 E-value=2.9e-11 Score=116.96 Aligned_cols=230 Identities=13% Similarity=0.082 Sum_probs=162.0
Q ss_pred cEEEEEeCCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCceeEEEecCCCCceEEEEeCCCcEEEEeCC--CCCCCCc
Q 014454 139 FLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDDAQICLWDIN--AAPKNKS 216 (424)
Q Consensus 139 ~~latg~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~iwd~~--~~~~~~~ 216 (424)
.++++...++.|.++|..+ .+.+..+. ....+..+.++|++. ++++++.|+.|.+||+. +.+
T Consensus 168 ~~~V~~~~~~~V~viD~~t----------~~v~~~i~-~g~~p~~v~~SpDGr-~lyv~~~dg~V~viD~~~~t~~---- 231 (567)
T 1qks_A 168 LFSVTLRDAGQIALIDGST----------YEIKTVLD-TGYAVHISRLSASGR-YLFVIGRDGKVNMIDLWMKEPT---- 231 (567)
T ss_dssp EEEEEETTTTEEEEEETTT----------CCEEEEEE-CSSCEEEEEECTTSC-EEEEEETTSEEEEEETTSSSCC----
T ss_pred eEEEEeCCCCeEEEEECCC----------CeEEEEEe-CCCCccceEECCCCC-EEEEEcCCCeEEEEECCCCCCc----
Confidence 4677778889999999987 34444554 344577999999998 68888999999999995 332
Q ss_pred ccceeeeecCCccEeeEEEe----cCCCcEEEEEeCCCeEEEEEcCCCCCCCCeeeeec----------c-CCCeeEEEe
Q 014454 217 LEAMQIFKVHEGVVEDVAWH----LRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVA----------H-QSEVNCLAF 281 (424)
Q Consensus 217 ~~~~~~~~~~~~~v~~~~~~----~~~~~~~~s~~~dg~i~i~d~~~~~~~~~~~~~~~----------~-~~~v~~v~~ 281 (424)
.+..+.. ......++|+ |+++.++++...++.|.++|..+.+. +..+.. | ...+..+..
T Consensus 232 --~v~~i~~-G~~P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~---~~~i~~~~~~~~~~~~~p~~rva~i~~ 305 (567)
T 1qks_A 232 --TVAEIKI-GSEARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEP---KKIQSTRGMTYDEQEYHPEPRVAAILA 305 (567)
T ss_dssp --EEEEEEC-CSEEEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCE---EEEEECCEECTTTCCEESCCCEEEEEE
T ss_pred --EeEEEec-CCCCceeEEccccCCCCCEEEEEEccCCeEEEEECCCCcE---EEEEeccccccccccccCCCceEEEEE
Confidence 2333332 3346799999 69999988888889999999888553 433321 1 225778888
Q ss_pred cCCCCeEEEEEeCCCcEEEEECCCCCCcceEecCCCCCEEEEEEcCCCCcEEEEEECCCeEEEeeCCCCCcccCCCCcCC
Q 014454 282 NPFNEWILATGSTDKTVKLFDLRKISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPEDAED 361 (424)
Q Consensus 282 ~~~~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~ 361 (424)
++++..++++...+|.|.++|....................+.|+|+++++++++..++.|.++|+.++.
T Consensus 306 s~~~~~~vv~~~~~g~v~~vd~~~~~~~~v~~i~~~~~~~d~~~~pdgr~~~va~~~sn~V~ViD~~t~k---------- 375 (567)
T 1qks_A 306 SHYRPEFIVNVKETGKILLVDYTDLNNLKTTEISAERFLHDGGLDGSHRYFITAANARNKLVVIDTKEGK---------- 375 (567)
T ss_dssp CSSSSEEEEEETTTTEEEEEETTCSSEEEEEEEECCSSEEEEEECTTSCEEEEEEGGGTEEEEEETTTTE----------
T ss_pred cCCCCEEEEEecCCCeEEEEecCCCccceeeeeeccccccCceECCCCCEEEEEeCCCCeEEEEECCCCc----------
Confidence 9988877777777899999999864322211222345677899999998777777778999999998753
Q ss_pred CCCeeeEEEc-----CCCCCcceEE-eCCCCCcEEEEEe-CCCcEEEEecCC
Q 014454 362 GPPELLFIHG-----GHTSKISDFS-WNPCEDWVISSVA-EDNILQIWQMAE 406 (424)
Q Consensus 362 ~~~~~~~~~~-----~h~~~v~~~~-~~~~~~~~l~s~~-~dg~i~vw~~~~ 406 (424)
++.... .|.+ ..+. ++|++..+++++. .++.|.+++..+
T Consensus 376 ----l~~~i~vgg~~Phpg--~g~~~~~p~~g~v~~t~~~g~~~Vsvid~~~ 421 (567)
T 1qks_A 376 ----LVAIEDTGGQTPHPG--RGANFVHPTFGPVWATSHMGDDSVALIGTDP 421 (567)
T ss_dssp ----EEEEEECSSSSBCCT--TCEEEEETTTEEEEEEEBSSSSEEEEEECCT
T ss_pred ----EEEEEeccCcCCCCc--cceeeECCCCCcEEEeCCCCCCeEEEecCCC
Confidence 222222 1322 2333 5787554666654 468999999876
No 190
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.52 E-value=2.5e-11 Score=108.37 Aligned_cols=233 Identities=10% Similarity=0.053 Sum_probs=155.9
Q ss_pred CceeEEEecCCCCcEEEEEeCCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCceeEEEecCCCCceEEEEeCCCcEEE
Q 014454 126 GEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDDAQICL 205 (424)
Q Consensus 126 ~~v~~~~~~p~~~~~latg~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~i 205 (424)
.-..+..|+|++..++++....+.|+.|+... .. ...+ .....+.++++++++. +++ +. ++.|.+
T Consensus 13 ~~~Egp~w~~~~~~l~~~d~~~~~i~~~d~~~----------~~-~~~~-~~~~~~~~i~~~~dG~-l~v-~~-~~~l~~ 77 (297)
T 3g4e_A 13 RCGESPVWEEVSNSLLFVDIPAKKVCRWDSFT----------KQ-VQRV-TMDAPVSSVALRQSGG-YVA-TI-GTKFCA 77 (297)
T ss_dssp SBEEEEEEETTTTEEEEEETTTTEEEEEETTT----------CC-EEEE-ECSSCEEEEEEBTTSS-EEE-EE-TTEEEE
T ss_pred ccccCCeEECCCCEEEEEECCCCEEEEEECCC----------Cc-EEEE-eCCCceEEEEECCCCC-EEE-EE-CCeEEE
Confidence 34568899997777888888889999999876 11 2222 3456799999999887 444 44 568999
Q ss_pred EeCCCCCCCCcccceeeee--cCCccEeeEEEecCCCcEEEEEeC---------CCeEEEEEcCCCCCCCCeeeeeccCC
Q 014454 206 WDINAAPKNKSLEAMQIFK--VHEGVVEDVAWHLRHEYLFGSVGD---------DQYLLIWDLRTPSVSKPVQSVVAHQS 274 (424)
Q Consensus 206 wd~~~~~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~~~~s~~~---------dg~i~i~d~~~~~~~~~~~~~~~~~~ 274 (424)
||..++.. ..+.... .....+++++++|++. ++++... ...-.||.+..... +..+.....
T Consensus 78 ~d~~~g~~----~~~~~~~~~~~~~~~~di~~d~dG~-l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~---~~~~~~~~~ 149 (297)
T 3g4e_A 78 LNWKEQSA----VVLATVDNDKKNNRFNDGKVDPAGR-YFAGTMAEETAPAVLERHQGALYSLFPDHH---VKKYFDQVD 149 (297)
T ss_dssp EETTTTEE----EEEEECCTTCSSEEEEEEEECTTSC-EEEEEEECCSBTTBCCTTCEEEEEECTTSC---EEEEEEEES
T ss_pred EECCCCcE----EEEEecCCCCCCCCCCCEEECCCCC-EEEecCCcccccccccCCCcEEEEEECCCC---EEEEeeccc
Confidence 99876521 1111111 1234688999999987 4444322 12334555543221 333333445
Q ss_pred CeeEEEecCCCCeEEEEEeCCCcEEEEECC-CCCCc-----ceEecCCCCCEEEEEEcCCCCcEEEEEECCCeEEEeeCC
Q 014454 275 EVNCLAFNPFNEWILATGSTDKTVKLFDLR-KISTA-----LHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLS 348 (424)
Q Consensus 275 ~v~~v~~~~~~~~~l~tg~~dg~i~iwd~~-~~~~~-----~~~~~~h~~~v~~~~~sp~~~~~l~s~~~dg~i~iwd~~ 348 (424)
..+.++|+|+++.++++.+.++.|.+||+. ..+.. +..+..+......++++++|. +.++...++.|.+||..
T Consensus 150 ~pngi~~spdg~~lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~-lwva~~~~~~v~~~d~~ 228 (297)
T 3g4e_A 150 ISNGLDWSLDHKIFYYIDSLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGK-LWVACYNGGRVIRLDPV 228 (297)
T ss_dssp BEEEEEECTTSCEEEEEEGGGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSC-EEEEEETTTEEEEECTT
T ss_pred cccceEEcCCCCEEEEecCCCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCC-EEEEEcCCCEEEEEcCC
Confidence 678999999998777777778999999974 21221 222333345788999999994 77777778899999987
Q ss_pred CCCcccCCCCcCCCCCeeeEEEcCCCCCcceEEeC-CCCCcEEEEEeCC
Q 014454 349 RIDEEQTPEDAEDGPPELLFIHGGHTSKISDFSWN-PCEDWVISSVAED 396 (424)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~-~~~~~~l~s~~~d 396 (424)
++ +++..+..+...+++++|. |+++.|+++...+
T Consensus 229 tG--------------~~~~~i~~p~~~~t~~~f~g~d~~~L~vt~~~~ 263 (297)
T 3g4e_A 229 TG--------------KRLQTVKLPVDKTTSCCFGGKNYSEMYVTCARD 263 (297)
T ss_dssp TC--------------CEEEEEECSSSBEEEEEEESGGGCEEEEEEBCT
T ss_pred Cc--------------eEEEEEECCCCCceEEEEeCCCCCEEEEEcCCc
Confidence 54 4455556666679999998 8888677776644
No 191
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.51 E-value=8e-11 Score=104.75 Aligned_cols=242 Identities=4% Similarity=-0.055 Sum_probs=158.6
Q ss_pred cCCceeEEEecCCCCcEEEEEeCCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCceeEEEecCCCCceEEEEeCCCcE
Q 014454 124 HDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDDAQI 203 (424)
Q Consensus 124 h~~~v~~~~~~p~~~~~latg~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i 203 (424)
+...+.++++.+++. +.++...++.|..|+... ......+......+.++++.+++. ++++...++.|
T Consensus 55 ~~~~~~~i~~~~~g~-l~v~~~~~~~i~~~~~~g----------~~~~~~~~~~~~~~~~i~~~~~g~-l~v~~~~~~~i 122 (299)
T 2z2n_A 55 PDAKVMCLTISSDGE-VWFTENAANKIGRITKKG----------IIKEYTLPNPDSAPYGITEGPNGD-IWFTEMNGNRI 122 (299)
T ss_dssp TTCCEEEEEECTTSC-EEEEETTTTEEEEECTTS----------CEEEEECSSTTCCEEEEEECTTSC-EEEEETTTTEE
T ss_pred ccCceeeEEECCCCC-EEEeCCCCCeEEEECCCC----------cEEEEeCCCcCCCceeeEECCCCC-EEEEecCCceE
Confidence 446788999999886 666656678899998753 111111222455788999999776 66666668899
Q ss_pred EEEeCCCCCCCCcccceeeeecCCccEeeEEEecCCCcEEEEEeCCCeEEEEEcCCCCCCCCeeeeeccCCCeeEEEecC
Q 014454 204 CLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNP 283 (424)
Q Consensus 204 ~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~v~~~~ 283 (424)
..||. ++.. .. .........+..+++.+++. ++++...++.|..||. ++.. . ..........+..+++++
T Consensus 123 ~~~d~-~g~~----~~-~~~~~~~~~~~~i~~~~~g~-l~v~~~~~~~i~~~~~-~g~~-~-~~~~~~~~~~~~~i~~~~ 192 (299)
T 2z2n_A 123 GRITD-DGKI----RE-YELPNKGSYPSFITLGSDNA-LWFTENQNNAIGRITE-SGDI-T-EFKIPTPASGPVGITKGN 192 (299)
T ss_dssp EEECT-TCCE----EE-EECSSTTCCEEEEEECTTSC-EEEEETTTTEEEEECT-TCCE-E-EEECSSTTCCEEEEEECT
T ss_pred EEECC-CCCE----EE-ecCCCCCCCCceEEEcCCCC-EEEEeCCCCEEEEEcC-CCcE-E-EeeCCCCCCcceeEEECC
Confidence 99998 3321 11 11122345689999999885 6666666789999998 5432 0 111223345688999999
Q ss_pred CCCeEEEEEeCCCcEEEEECCCCCCcce-EecCCCCCEEEEEEcCCCCcEEEEEECCCeEEEeeCCCCCcccCCCCcCCC
Q 014454 284 FNEWILATGSTDKTVKLFDLRKISTALH-TFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPEDAEDG 362 (424)
Q Consensus 284 ~~~~~l~tg~~dg~i~iwd~~~~~~~~~-~~~~h~~~v~~~~~sp~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~ 362 (424)
++. ++++...++.|.+||. + +.... ....+...+.++++++++. ++++...++.|.+||.. +.
T Consensus 193 ~g~-l~v~~~~~~~i~~~~~-~-g~~~~~~~~~~~~~~~~i~~~~~g~-l~v~~~~~~~i~~~d~~-g~----------- 256 (299)
T 2z2n_A 193 DDA-LWFVEIIGNKIGRITT-S-GEITEFKIPTPNARPHAITAGAGID-LWFTEWGANKIGRLTSN-NI----------- 256 (299)
T ss_dssp TSS-EEEEETTTTEEEEECT-T-CCEEEEECSSTTCCEEEEEECSTTC-EEEEETTTTEEEEEETT-TE-----------
T ss_pred CCC-EEEEccCCceEEEECC-C-CcEEEEECCCCCCCceeEEECCCCC-EEEeccCCceEEEECCC-Cc-----------
Confidence 887 6666666789999998 4 33222 2233456799999999985 66666577889999983 21
Q ss_pred CCeeeEEEcCCCCCcceEEeCCCCCcEEEEEeCCCcEEEEecCCcc
Q 014454 363 PPELLFIHGGHTSKISDFSWNPCEDWVISSVAEDNILQIWQMAENI 408 (424)
Q Consensus 363 ~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~ 408 (424)
........+...+.++++ +++. ++++.. .+.+..+++.++.
T Consensus 257 --~~~~~~~~~~~~~~~i~~-~~g~-l~v~~~-~~~l~~~~~~~~~ 297 (299)
T 2z2n_A 257 --IEEYPIQIKSAEPHGICF-DGET-IWFAME-CDKIGKLTLIKDN 297 (299)
T ss_dssp --EEEEECSSSSCCEEEEEE-CSSC-EEEEET-TTEEEEEEEC---
T ss_pred --eEEEeCCCCCCccceEEe-cCCC-EEEEec-CCcEEEEEcCccc
Confidence 111222344556889999 8888 566654 5678888877654
No 192
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.51 E-value=2.7e-11 Score=113.03 Aligned_cols=240 Identities=10% Similarity=0.034 Sum_probs=160.4
Q ss_pred CceeEEEecCCCCcEEEEEeCCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCceeEEEecCCCCceEEEEeCCC--cE
Q 014454 126 GEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDDA--QI 203 (424)
Q Consensus 126 ~~v~~~~~~p~~~~~latg~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg--~i 203 (424)
.....|+|+|++. ++++...++.|++||... .. ...+........ ++|++++. .|+++..++ .|
T Consensus 131 ~~P~~la~d~~g~-lyv~d~~~~~I~~id~~~----------g~-~~~~~~~~~~~~-ia~~~~g~-~l~~~d~~~~~~I 196 (409)
T 3hrp_A 131 KYMWGIAAVGNNT-VLAYQRDDPRVRLISVDD----------NK-VTTVHPGFKGGK-PAVTKDKQ-RVYSIGWEGTHTV 196 (409)
T ss_dssp CCEEEEEECSTTE-EEEEETTTTEEEEEETTT----------TE-EEEEEETCCBCB-CEECTTSS-EEEEEBSSTTCEE
T ss_pred CCceEEEEeCCCC-EEEEecCCCcEEEEECCC----------CE-EEEeeccCCCCc-eeEecCCC-cEEEEecCCCceE
Confidence 4678999999886 777777789999999876 12 223332333344 99999887 677777655 78
Q ss_pred EEEeCCCCCCCCcccceeeeec-CCccEeeEEEecCCCcEEEEEeCCCeEEEEEcCCCCCCCCeee--eeccCCC--eeE
Q 014454 204 CLWDINAAPKNKSLEAMQIFKV-HEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQS--VVAHQSE--VNC 278 (424)
Q Consensus 204 ~iwd~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~~s~~~dg~i~i~d~~~~~~~~~~~~--~~~~~~~--v~~ 278 (424)
.+++....... ..+..... ....+.+++++|++..+++ +..++.|+.||..++.. ..+.. ....... ...
T Consensus 197 ~~~d~~~~~~~---~~~g~~~~~~~~~p~~iav~p~~g~lyv-~d~~~~I~~~d~~~~~~-~~~~~~~~~g~~~~~P~~~ 271 (409)
T 3hrp_A 197 YVYMKASGWAP---TRIGQLGSTFSGKIGAVALDETEEWLYF-VDSNKNFGRFNVKTQEV-TLIKQLELSGSLGTNPGPY 271 (409)
T ss_dssp EEEEGGGTTCE---EEEEECCTTSCSCCCBCEECTTSSEEEE-ECTTCEEEEEETTTCCE-EEEEECCCCSCCCCSSCCE
T ss_pred EEEEcCCCcee---EEeeeccchhcCCcEEEEEeCCCCeEEE-EECCCcEEEEECCCCCE-EEEecccccCCCCCCcccc
Confidence 88887654221 11111112 3466789999996666765 66788999999986542 11100 1111111 239
Q ss_pred EEecCCCCeEEEEEeCCCcEEEEECCCCCCcceEecCCC---------------CCEEEEEEcCCCCcEEEEEE-CCCeE
Q 014454 279 LAFNPFNEWILATGSTDKTVKLFDLRKISTALHTFDSHK---------------EEVFQVGWNPKNETILASCC-LGRRL 342 (424)
Q Consensus 279 v~~~~~~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~~h~---------------~~v~~~~~sp~~~~~l~s~~-~dg~i 342 (424)
++|+|++..++++-..++.|+.||... . +..+.++. .....++++|++. ++++-. .+++|
T Consensus 272 ia~~p~~g~lyv~d~~~~~I~~~~~~g--~-~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~-lyvad~~~~~~I 347 (409)
T 3hrp_A 272 LIYYFVDSNFYMSDQNLSSVYKITPDG--E-CEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGN-FYIVDGFKGYCL 347 (409)
T ss_dssp EEEETTTTEEEEEETTTTEEEEECTTC--C-EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCC-EEEEETTTTCEE
T ss_pred EEEeCCCCEEEEEeCCCCEEEEEecCC--C-EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCC-EEEEeCCCCCEE
Confidence 999997666788877889999998764 2 33333322 3478999999996 777777 78999
Q ss_pred EEeeCCCCCcccCCCCcCCCCCeeeEEEcCC---------------CCCcceEEeCCCCCcEEEEEeCCCcEEEEec
Q 014454 343 MVWDLSRIDEEQTPEDAEDGPPELLFIHGGH---------------TSKISDFSWNPCEDWVISSVAEDNILQIWQM 404 (424)
Q Consensus 343 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h---------------~~~v~~~~~~~~~~~~l~s~~~dg~i~vw~~ 404 (424)
+.|++..+. +..+.++ -....++++++++. ++++-..++.|+.+++
T Consensus 348 ~~~~~~~G~---------------v~~~~g~~~~~g~~~g~~~~~~~~~P~giavd~~g~-lyVad~~n~~Ir~i~~ 408 (409)
T 3hrp_A 348 RKLDILDGY---------------VSTVAGQVDVASQIDGTPLEATFNYPYDICYDGEGG-YWIAEAWGKAIRKYAV 408 (409)
T ss_dssp EEEETTTTE---------------EEEEEECTTCBSCCCBSTTTCCBSSEEEEEECSSSE-EEEEESTTCEEEEEEE
T ss_pred EEEECCCCE---------------EEEEeCCCCCCCcCCCChhceEeCCceEEEEcCCCC-EEEEECCCCeEEEEEe
Confidence 999975532 1111111 23578899999976 7888888888988775
No 193
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.50 E-value=1.5e-12 Score=119.04 Aligned_cols=180 Identities=13% Similarity=0.076 Sum_probs=127.3
Q ss_pred ceeEEEecCCCCcEEEEEeCCCeEEEEeCCCCCCCCC-CCCCCCCcEEEecCCCceeEEEecCCCCceEEEEeCCCcEEE
Q 014454 127 EVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPP-LDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDDAQICL 205 (424)
Q Consensus 127 ~v~~~~~~p~~~~~latg~~dg~v~iw~~~~~~~~~~-~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~i 205 (424)
.++.+++++... ++++|+.+ .+.+|++........ ......+.... .+.. |+.|+| ++. +|+++ .++.|++
T Consensus 39 ~~nlLais~~~g-ll~a~~~~-~l~v~~~~~l~~~~~~~~~~~~~~~~~-~lp~-V~~l~f--d~~-~L~v~-~~~~l~v 110 (388)
T 1xip_A 39 SLQNLDISNSKS-LFVAASGS-KAVVGELQLLRDHITSDSTPLTFKWEK-EIPD-VIFVCF--HGD-QVLVS-TRNALYS 110 (388)
T ss_dssp CCBCEEEETTTT-EEEEEETT-EEEEEEHHHHHHHHHSSSCCCCCSEEE-ECTT-EEEEEE--ETT-EEEEE-ESSEEEE
T ss_pred cccEEEEcCCCC-EEEEeCCC-EEEEEEhhHhhhhhccccccccceEEe-eCCC-eeEEEE--CCC-EEEEE-cCCcEEE
Confidence 588999999776 78888877 566699764210000 00012232333 4667 999999 666 68877 8899999
Q ss_pred EeCCCCCCCCcccceeeeecCCccEeeEEEecCCCcEEEEEeCCCeEEEEEcCCCCCCCCeeeeeccCCCeeEEEecCCC
Q 014454 206 WDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFN 285 (424)
Q Consensus 206 wd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~v~~~~~~ 285 (424)
||+.+... ......|...+.++.+.+. . +++++.||.|.+||+..+.. . . +...|+|++|+|.|
T Consensus 111 ~dv~sl~~------~~~~~~~~~~v~~i~~~~p--~-~av~~~dG~L~v~dl~~~~~---~-~---~~~~Vs~v~WSpkG 174 (388)
T 1xip_A 111 LDLEELSE------FRTVTSFEKPVFQLKNVNN--T-LVILNSVNDLSALDLRTKST---K-Q---LAQNVTSFDVTNSQ 174 (388)
T ss_dssp EESSSTTC------EEEEEECSSCEEEEEECSS--E-EEEEETTSEEEEEETTTCCE---E-E---EEESEEEEEECSSE
T ss_pred EEchhhhc------cCccceeecceeeEEecCC--C-EEEEECCCCEEEEEccCCcc---c-c---ccCCceEEEEcCCc
Confidence 99976542 2234456777888877654 3 66889999999999997653 2 1 34689999999988
Q ss_pred CeEEEEEeCCCcEEEEECCCCCCc--ceEe------c---CCCCCEEEEEEcCCCCcEEEE
Q 014454 286 EWILATGSTDKTVKLFDLRKISTA--LHTF------D---SHKEEVFQVGWNPKNETILAS 335 (424)
Q Consensus 286 ~~~l~tg~~dg~i~iwd~~~~~~~--~~~~------~---~h~~~v~~~~~sp~~~~~l~s 335 (424)
++.|..||++++|+... ... ..++ . +|...|.++.|.+++. ++++
T Consensus 175 ---~~vg~~dg~i~~~~~~~-~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~~-flv~ 230 (388)
T 1xip_A 175 ---LAVLLKDRSFQSFAWRN-GEMEKQFEFSLPSELEELPVEEYSPLSVTILSPQD-FLAV 230 (388)
T ss_dssp ---EEEEETTSCEEEEEEET-TEEEEEEEECCCHHHHTSCTTTSEEEEEEESSSSE-EEEE
T ss_pred ---eEEEEcCCcEEEEcCCC-ccccccceecCCcccccccCCCeeEEEEEEecCCe-EEEE
Confidence 56789999999998876 332 4445 2 4788999999999885 4554
No 194
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.49 E-value=3e-11 Score=121.34 Aligned_cols=205 Identities=12% Similarity=0.021 Sum_probs=137.2
Q ss_pred eeEEEecCCCCcEEEEEeCCCe----------------EEEEeCCCCCCCCCCCCCCCCcEEEec--CCCceeEEEecCC
Q 014454 128 VNRARYMPQNPFLIATKTVSAE----------------VYVFDYSKHPSKPPLDGACSPDLRLRG--HSTEGYGLSWSKF 189 (424)
Q Consensus 128 v~~~~~~p~~~~~latg~~dg~----------------v~iw~~~~~~~~~~~~~~~~~~~~~~~--h~~~v~~l~~~~~ 189 (424)
+..++|+|+++ .|+.++.++. |++|++.+. .......+.. |...+.++.|+|+
T Consensus 173 ~~~~~wspDg~-~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~--------~~~~~~v~~~~~~~~~~~~~~~SpD 243 (710)
T 2xdw_A 173 FSCMAWTHDGK-GMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTD--------QSEDILCAEFPDEPKWMGGAELSDD 243 (710)
T ss_dssp SCCEEECTTSS-EEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSC--------GGGCEEEECCTTCTTCEEEEEECTT
T ss_pred cceEEEEeCCC-EEEEEEECCccccccccccccCCCCEEEEEECCCC--------cccceEEeccCCCCeEEEEEEEcCC
Confidence 67899999997 4555566554 999999762 1111222232 4555789999999
Q ss_pred CCceEEEEeC-----CCcEEEEeCCC------CCCCCcccceeeeecCCccEeeEEEecCCCcEEEEEeCC---CeEEEE
Q 014454 190 KEGHLLSGSD-----DAQICLWDINA------APKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDD---QYLLIW 255 (424)
Q Consensus 190 ~~~~l~s~~~-----dg~i~iwd~~~------~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~d---g~i~i~ 255 (424)
+. +|+.++. +..|.+||+.+ +.. ....+..+...+.. .|++++..+++.+..+ +.|.+|
T Consensus 244 g~-~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~-----~~~~l~~~~~~~~~-~~s~dg~~l~~~s~~~~~~~~l~~~ 316 (710)
T 2xdw_A 244 GR-YVLLSIREGCDPVNRLWYCDLQQESNGITGIL-----KWVKLIDNFEGEYD-YVTNEGTVFTFKTNRHSPNYRLINI 316 (710)
T ss_dssp SC-EEEEEEECSSSSCCEEEEEEGGGSSSSSCSSC-----CCEEEECSSSSCEE-EEEEETTEEEEEECTTCTTCEEEEE
T ss_pred CC-EEEEEEEccCCCccEEEEEECcccccccCCcc-----ceEEeeCCCCcEEE-EEeccCCEEEEEECCCCCCCEEEEE
Confidence 98 5555543 56899999975 311 12333445555544 4788888776665443 469999
Q ss_pred EcCCCCCCCCeeeeeccCC--CeeEEEecCCCCeEEEEEeCCCc--EEEEECCCCCCcceEecCCCCCEEEEEEcCCCCc
Q 014454 256 DLRTPSVSKPVQSVVAHQS--EVNCLAFNPFNEWILATGSTDKT--VKLFDLRKISTALHTFDSHKEEVFQVGWNPKNET 331 (424)
Q Consensus 256 d~~~~~~~~~~~~~~~~~~--~v~~v~~~~~~~~~l~tg~~dg~--i~iwd~~~~~~~~~~~~~h~~~v~~~~~sp~~~~ 331 (424)
|+.++.. .....+..+.. .+..++|++.+ .++++...++. |.+||+.+ +..+..+..+...+..+.++|+++.
T Consensus 317 d~~~~~~-~~~~~l~~~~~~~~~~~~~~~~~~-~lv~~~~~~g~~~l~~~~~~~-g~~~~~l~~~~~~v~~~~~s~d~~~ 393 (710)
T 2xdw_A 317 DFTDPEE-SKWKVLVPEHEKDVLEWVACVRSN-FLVLCYLHDVKNTLQLHDLAT-GALLKIFPLEVGSVVGYSGQKKDTE 393 (710)
T ss_dssp ETTSCCG-GGCEEEECCCSSCEEEEEEEETTT-EEEEEEEETTEEEEEEEETTT-CCEEEEECCCSSEEEEEECCTTCSE
T ss_pred eCCCCCc-ccceeccCCCCCCeEEEEEEEcCC-EEEEEEEECCEEEEEEEECCC-CCEEEecCCCCceEEEEecCCCCCE
Confidence 9987541 11234444443 67889998644 57888888884 56677755 5566777777788999999998876
Q ss_pred EEEEEEC---CCeEEEeeCCCCC
Q 014454 332 ILASCCL---GRRLMVWDLSRID 351 (424)
Q Consensus 332 ~l~s~~~---dg~i~iwd~~~~~ 351 (424)
++++.+. .+.|.+||+.++.
T Consensus 394 l~~~~ss~~~P~~i~~~d~~tg~ 416 (710)
T 2xdw_A 394 IFYQFTSFLSPGIIYHCDLTKEE 416 (710)
T ss_dssp EEEEEECSSCCCEEEEEETTSSS
T ss_pred EEEEEeCCCCCCEEEEEECCCCc
Confidence 6655544 4789999997754
No 195
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.49 E-value=9.3e-12 Score=125.62 Aligned_cols=251 Identities=10% Similarity=0.035 Sum_probs=154.2
Q ss_pred CceeEEEecCCCCcEEEEEeCCC----eEEEEeCCCCCCCCCCCCCCCCcEEEecCCCceeEEEecCCCCceEEEEeCCC
Q 014454 126 GEVNRARYMPQNPFLIATKTVSA----EVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDDA 201 (424)
Q Consensus 126 ~~v~~~~~~p~~~~~latg~~dg----~v~iw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg 201 (424)
..+..++|+|+|+.++.+.+..| .|++||+.+ + ... ....+...+..++|+|+ + .|+.++.++
T Consensus 163 ~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~t--------g--~~~-~~~~~~~~~~~~~wspD-~-~l~~~~~~~ 229 (741)
T 1yr2_A 163 TALDAWAASDDGRLLAYSVQDGGSDWRTVKFVGVAD--------G--KPL-ADELKWVKFSGLAWLGN-D-ALLYSRFAE 229 (741)
T ss_dssp EEEEEEEECTTSSEEEEEEEETTCSEEEEEEEETTT--------C--CEE-EEEEEEEESCCCEESTT-S-EEEEEECCC
T ss_pred EEEEeEEECCCCCEEEEEEcCCCCceEEEEEEECCC--------C--CCC-CccCCCceeccEEEECC-C-EEEEEEecC
Confidence 46788999999985444433333 599999987 2 211 12112222367999998 6 566666554
Q ss_pred c--------------EEEEeCCCCCCCCcccceeeeecCCccEeeEEEecCCCcEEEEEeC----CCeEEEEEcCCCCCC
Q 014454 202 Q--------------ICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGD----DQYLLIWDLRTPSVS 263 (424)
Q Consensus 202 ~--------------i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~----dg~i~i~d~~~~~~~ 263 (424)
. |++|++.++..... .+.....+...+..+.|+|+++.++++... ...|++||+.++..
T Consensus 230 ~~~~~~~~~~~~~~~v~~~~lgt~~~~~~--lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~- 306 (741)
T 1yr2_A 230 PKEGQAFQALNYNQTVWLHRLGTPQSADQ--PVFATPELPKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKI- 306 (741)
T ss_dssp C--------CCCCCEEEEEETTSCGGGCE--EEECCTTCTTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEE-
T ss_pred cccccccccCCCCCEEEEEECCCCchhCE--EEeccCCCCeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCC-
Confidence 3 88999876532111 111112233358899999999877655542 34899999987521
Q ss_pred CCeeeeeccCCCeeEEEecCCCCeEEEEEeC---CCcEEEEECCCCC-CcceEecCCCCCEEEEEEcCCCCcEEEEEECC
Q 014454 264 KPVQSVVAHQSEVNCLAFNPFNEWILATGST---DKTVKLFDLRKIS-TALHTFDSHKEEVFQVGWNPKNETILASCCLG 339 (424)
Q Consensus 264 ~~~~~~~~~~~~v~~v~~~~~~~~~l~tg~~---dg~i~iwd~~~~~-~~~~~~~~h~~~v~~~~~sp~~~~~l~s~~~d 339 (424)
.....+..+...+.... .|++..+++.... ++.|.+||+.+.. .....+..+...+..++|+ +..++++...|
T Consensus 307 ~~~~~l~~~~~~~~~~~-~~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~l~~~~~~--~~~lv~~~~~d 383 (741)
T 1yr2_A 307 GPVTALIPDLKAQWDFV-DGVGDQLWFVSGDGAPLKKIVRVDLSGSTPRFDTVVPESKDNLESVGIA--GNRLFASYIHD 383 (741)
T ss_dssp CCCEEEECSSSSCEEEE-EEETTEEEEEECTTCTTCEEEEEECSSSSCEEEEEECCCSSEEEEEEEE--BTEEEEEEEET
T ss_pred cccEEecCCCCceEEEE-eccCCEEEEEECCCCCCCEEEEEeCCCCccccEEEecCCCCeEEEEEEE--CCEEEEEEEEC
Confidence 11334444444555554 3788864444432 3469999987631 2333344445556678887 34688899999
Q ss_pred CeEEEeeCCCCCcccCCCCcCCCCCeeeEEEcC-CCCCcceEEeCCCCCcEEEEEe---CCCcEEEEecCCcc
Q 014454 340 RRLMVWDLSRIDEEQTPEDAEDGPPELLFIHGG-HTSKISDFSWNPCEDWVISSVA---EDNILQIWQMAENI 408 (424)
Q Consensus 340 g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~-h~~~v~~~~~~~~~~~~l~s~~---~dg~i~vw~~~~~~ 408 (424)
+..+||.+.... .....+.. +...+..+.++|+++.++++.+ ..+.|++||+.++.
T Consensus 384 g~~~l~~~~~~g-------------~~~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~ 443 (741)
T 1yr2_A 384 AKSQVLAFDLDG-------------KPAGAVSLPGIGSASGLSGRPGDRHAYLSFSSFTQPATVLALDPATAK 443 (741)
T ss_dssp TEEEEEEEETTS-------------CEEEECBCSSSCEEEEEECCBTCSCEEEEEEETTEEEEEEEEETTTTE
T ss_pred CEEEEEEEeCCC-------------CceeeccCCCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCCc
Confidence 988887654211 12222332 3456888999999886555544 34789999998764
No 196
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.48 E-value=2.7e-11 Score=106.68 Aligned_cols=210 Identities=8% Similarity=-0.010 Sum_probs=147.1
Q ss_pred cEEEEEeCCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCC-CceeEEEecCCCCceEEEEeCCCcEEEEeCCCCCCCCcc
Q 014454 139 FLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHS-TEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSL 217 (424)
Q Consensus 139 ~~latg~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~h~-~~v~~l~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~ 217 (424)
++|++++.++.|++||..+ .+.+..+..+. ..+.++.+.|+|. +|+ +.++.|..||. +++.
T Consensus 6 ~~lv~~~~~~~v~~~d~~t----------G~~~w~~~~~~~~~~~~~~~~pdG~-ilv--s~~~~V~~~d~-~G~~---- 67 (276)
T 3no2_A 6 HLLVGGSGWNKIAIINKDT----------KEIVWEYPLEKGWECNSVAATKAGE-ILF--SYSKGAKMITR-DGRE---- 67 (276)
T ss_dssp EEEEECTTCSEEEEEETTT----------TEEEEEEECCTTCCCCEEEECTTSC-EEE--ECBSEEEEECT-TSCE----
T ss_pred cEEEeeCCCCEEEEEECCC----------CeEEEEeCCCccCCCcCeEECCCCC-EEE--eCCCCEEEECC-CCCE----
Confidence 4899999999999999866 45566777665 4788999999887 666 45778999998 5532
Q ss_pred cceeeeecC-CccEeeEEEecCCCcEEEEEeC-CCeEEEEEcCCCCCCCCeeeee------ccCCCeeEEEecCCCCeEE
Q 014454 218 EAMQIFKVH-EGVVEDVAWHLRHEYLFGSVGD-DQYLLIWDLRTPSVSKPVQSVV------AHQSEVNCLAFNPFNEWIL 289 (424)
Q Consensus 218 ~~~~~~~~~-~~~v~~~~~~~~~~~~~~s~~~-dg~i~i~d~~~~~~~~~~~~~~------~~~~~v~~v~~~~~~~~~l 289 (424)
+..+..+ ...+.++.+.+++..++ +.+. ++.|..+|. .++. +..+. .+......+++.+++. ++
T Consensus 68 --~W~~~~~~~~~~~~~~~~~dG~~lv-~~~~~~~~v~~vd~-~Gk~---l~~~~~~~~~~~~~~~~~~v~~~~~G~-~l 139 (276)
T 3no2_A 68 --LWNIAAPAGCEMQTARILPDGNALV-AWCGHPSTILEVNM-KGEV---LSKTEFETGIERPHAQFRQINKNKKGN-YL 139 (276)
T ss_dssp --EEEEECCTTCEEEEEEECTTSCEEE-EEESTTEEEEEECT-TSCE---EEEEEECCSCSSGGGSCSCCEECTTSC-EE
T ss_pred --EEEEcCCCCccccccEECCCCCEEE-EecCCCCEEEEEeC-CCCE---EEEEeccCCCCcccccccCceECCCCC-EE
Confidence 3333333 34788899999997554 5555 777877775 3332 22222 1112455667888887 68
Q ss_pred EEEeCCCcEEEEECCCCCCcceEecCCCCCEEEEEEcCCCCcEEEEEECCCeEEEeeCCCCCcccCCCCcCCCCCeeeEE
Q 014454 290 ATGSTDKTVKLFDLRKISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPEDAEDGPPELLFI 369 (424)
Q Consensus 290 ~tg~~dg~i~iwd~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~ 369 (424)
++...++.|..||.. ++.+.++..+ ..+.++...+++. ++++++.+++|..+|..++. .+..
T Consensus 140 v~~~~~~~v~~~d~~--G~~~w~~~~~-~~~~~~~~~~~g~-~~v~~~~~~~v~~~d~~tG~--------------~~w~ 201 (276)
T 3no2_A 140 VPLFATSEVREIAPN--GQLLNSVKLS-GTPFSSAFLDNGD-CLVACGDAHCFVQLNLESNR--------------IVRR 201 (276)
T ss_dssp EEETTTTEEEEECTT--SCEEEEEECS-SCCCEEEECTTSC-EEEECBTTSEEEEECTTTCC--------------EEEE
T ss_pred EEecCCCEEEEECCC--CCEEEEEECC-CCccceeEcCCCC-EEEEeCCCCeEEEEeCcCCc--------------EEEE
Confidence 888889999999986 5777777754 4566788889885 78788888899999988653 3444
Q ss_pred EcCC------CCCcceEEeCCCCCcEEEEE
Q 014454 370 HGGH------TSKISDFSWNPCEDWVISSV 393 (424)
Q Consensus 370 ~~~h------~~~v~~~~~~~~~~~~l~s~ 393 (424)
+..+ ...+..++..+++. ++++.
T Consensus 202 ~~~~~~~~~~l~~~~~~~~~~~G~-i~v~~ 230 (276)
T 3no2_A 202 VNANDIEGVQLFFVAQLFPLQNGG-LYICN 230 (276)
T ss_dssp EEGGGSBSCCCSEEEEEEECTTSC-EEEEE
T ss_pred ecCCCCCCccccccccceEcCCCC-EEEEe
Confidence 4322 12366777888888 55555
No 197
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.47 E-value=1e-11 Score=110.70 Aligned_cols=210 Identities=10% Similarity=-0.008 Sum_probs=143.0
Q ss_pred cEEEecCCCceeEEEecCCCCceEEEEeCCCcEEEEeCCCCCCCCcccceeeeecCCccEeeEEEecCCCcEEEEEeCCC
Q 014454 171 DLRLRGHSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQ 250 (424)
Q Consensus 171 ~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~dg 250 (424)
...+..+.....+++|+|++..+++++..++.|..|+..++ ...+..+...+.++++++++. ++++...++
T Consensus 20 ~~~l~~~~~~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~--------~~~~~~~~~~~~~l~~~~dg~-l~v~~~~~~ 90 (296)
T 3e5z_A 20 ARRLADGFTWTEGPVYVPARSAVIFSDVRQNRTWAWSDDGQ--------LSPEMHPSHHQNGHCLNKQGH-LIACSHGLR 90 (296)
T ss_dssp CEEEECCCSSEEEEEEEGGGTEEEEEEGGGTEEEEEETTSC--------EEEEESSCSSEEEEEECTTCC-EEEEETTTT
T ss_pred EEEEecCCccccCCeEeCCCCEEEEEeCCCCEEEEEECCCC--------eEEEECCCCCcceeeECCCCc-EEEEecCCC
Confidence 45566666778899999988767888888999999998754 223344667799999999986 666666678
Q ss_pred eEEEEEcCCCCCCCCeeee-e-ccCCCeeEEEecCCCCeEEEE----Ee-------------CCCcEEEEECCCCCCcce
Q 014454 251 YLLIWDLRTPSVSKPVQSV-V-AHQSEVNCLAFNPFNEWILAT----GS-------------TDKTVKLFDLRKISTALH 311 (424)
Q Consensus 251 ~i~i~d~~~~~~~~~~~~~-~-~~~~~v~~v~~~~~~~~~l~t----g~-------------~dg~i~iwd~~~~~~~~~ 311 (424)
.|.+||..++... .+... . .....++.++++|+|. ++++ |+ ..+.|..++.. ..+.
T Consensus 91 ~i~~~d~~~g~~~-~~~~~~~~~~~~~~~~i~~d~~G~-l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~---g~~~ 165 (296)
T 3e5z_A 91 RLERQREPGGEWE-SIADSFEGKKLNSPNDVCLAPDGS-LWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD---GTLS 165 (296)
T ss_dssp EEEEECSTTCCEE-EEECEETTEECCCCCCEEECTTSC-EEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT---SCEE
T ss_pred eEEEEcCCCCcEE-EEeeccCCCCCCCCCCEEECCCCC-EEEECCccccccccccccccccCCCcEEEEECCC---CCEE
Confidence 9999999776521 11110 1 1123567899999997 6666 32 12345555543 2344
Q ss_pred EecCCCCCEEEEEEcCCCCcEEEEEECCCeEEEeeCCCCCcccCCCCcCCCCCeeeEEEcCCCCCcceEEeCCCCCcEEE
Q 014454 312 TFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPEDAEDGPPELLFIHGGHTSKISDFSWNPCEDWVIS 391 (424)
Q Consensus 312 ~~~~h~~~v~~~~~sp~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~ 391 (424)
.+..+......++|+|++.. |++.+.++.|.+|++....... .....+..+...+.+++++++|. +++
T Consensus 166 ~~~~~~~~~~gi~~s~dg~~-lv~~~~~~~i~~~~~~~~g~~~----------~~~~~~~~~~~~p~~i~~d~~G~-l~v 233 (296)
T 3e5z_A 166 APIRDRVKPNGLAFLPSGNL-LVSDTGDNATHRYCLNARGETE----------YQGVHFTVEPGKTDGLRVDAGGL-IWA 233 (296)
T ss_dssp EEECCCSSEEEEEECTTSCE-EEEETTTTEEEEEEECSSSCEE----------EEEEEECCSSSCCCSEEEBTTSC-EEE
T ss_pred EeecCCCCCccEEECCCCCE-EEEeCCCCeEEEEEECCCCcCc----------CCCeEeeCCCCCCCeEEECCCCC-EEE
Confidence 45556677899999999974 5777788999999986211100 00111133555678899999998 666
Q ss_pred EEeCCCcEEEEecCCcc
Q 014454 392 SVAEDNILQIWQMAENI 408 (424)
Q Consensus 392 s~~~dg~i~vw~~~~~~ 408 (424)
+. ++.|.+|+.....
T Consensus 234 ~~--~~~v~~~~~~g~~ 248 (296)
T 3e5z_A 234 SA--GDGVHVLTPDGDE 248 (296)
T ss_dssp EE--TTEEEEECTTSCE
T ss_pred Ec--CCeEEEECCCCCE
Confidence 65 7889999987543
No 198
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.45 E-value=2.1e-10 Score=103.73 Aligned_cols=228 Identities=11% Similarity=0.026 Sum_probs=148.9
Q ss_pred ceeEEEecCCCCcEEEEEeCCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCceeEEEecCCCCceEEEEeCCCcEEEE
Q 014454 127 EVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDDAQICLW 206 (424)
Q Consensus 127 ~v~~~~~~p~~~~~latg~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~iw 206 (424)
.....+|+|++..+++++..++.|..|+... + . ...+. ....+.+++|++++. ++++ +.+ .|.+|
T Consensus 50 ~~egp~~~~~~~~l~~~d~~~~~i~~~d~~~--------~--~-~~~~~-~~~~v~~i~~~~dg~-l~v~-~~~-gl~~~ 114 (326)
T 2ghs_A 50 LGEGPTFDPASGTAWWFNILERELHELHLAS--------G--R-KTVHA-LPFMGSALAKISDSK-QLIA-SDD-GLFLR 114 (326)
T ss_dssp BEEEEEEETTTTEEEEEEGGGTEEEEEETTT--------T--E-EEEEE-CSSCEEEEEEEETTE-EEEE-ETT-EEEEE
T ss_pred CCcCCeEeCCCCEEEEEECCCCEEEEEECCC--------C--c-EEEEE-CCCcceEEEEeCCCe-EEEE-ECC-CEEEE
Confidence 3467899998777888888889999999876 1 1 12222 356799999999876 4444 444 49999
Q ss_pred eCCCCCCCCcccceeeee--cCCccEeeEEEecCCCcEEEEEeC------CCeEEEEEcCCCCCCCCeeeeeccCCCeeE
Q 014454 207 DINAAPKNKSLEAMQIFK--VHEGVVEDVAWHLRHEYLFGSVGD------DQYLLIWDLRTPSVSKPVQSVVAHQSEVNC 278 (424)
Q Consensus 207 d~~~~~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~~~~s~~~------dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~ 278 (424)
|..++.. ..+.... .....+++++++|++. ++++... .+.|..++ +++ +..+.......+.
T Consensus 115 d~~~g~~----~~~~~~~~~~~~~~~~~i~~d~~G~-l~v~~~~~~~~~~~~~l~~~~--~g~----~~~~~~~~~~~~~ 183 (326)
T 2ghs_A 115 DTATGVL----TLHAELESDLPGNRSNDGRMHPSGA-LWIGTMGRKAETGAGSIYHVA--KGK----VTKLFADISIPNS 183 (326)
T ss_dssp ETTTCCE----EEEECSSTTCTTEEEEEEEECTTSC-EEEEEEETTCCTTCEEEEEEE--TTE----EEEEEEEESSEEE
T ss_pred ECCCCcE----EEEeeCCCCCCCCCCCCEEECCCCC-EEEEeCCCcCCCCceEEEEEe--CCc----EEEeeCCCcccCC
Confidence 9876532 1111111 1124689999999987 4444332 24555555 322 2223233345789
Q ss_pred EEecCCCCeEEEEEeCCCcEEEEECC--CCC-Cc-----ceEecCCCCCEEEEEEcCCCCcEEEEEECCCeEEEeeCCCC
Q 014454 279 LAFNPFNEWILATGSTDKTVKLFDLR--KIS-TA-----LHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRI 350 (424)
Q Consensus 279 v~~~~~~~~~l~tg~~dg~i~iwd~~--~~~-~~-----~~~~~~h~~~v~~~~~sp~~~~~l~s~~~dg~i~iwd~~~~ 350 (424)
++|+|+++.++++.+.++.|.+||+. + + .. +..+......+..+++++++. ++++...++.|.+|+...
T Consensus 184 i~~s~dg~~lyv~~~~~~~I~~~d~~~~~-Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~-lwva~~~~~~v~~~d~~g- 260 (326)
T 2ghs_A 184 ICFSPDGTTGYFVDTKVNRLMRVPLDART-GLPTGKAEVFIDSTGIKGGMDGSVCDAEGH-IWNARWGEGAVDRYDTDG- 260 (326)
T ss_dssp EEECTTSCEEEEEETTTCEEEEEEBCTTT-CCBSSCCEEEEECTTSSSEEEEEEECTTSC-EEEEEETTTEEEEECTTC-
T ss_pred eEEcCCCCEEEEEECCCCEEEEEEccccc-CCcccCceEEEECCCCCCCCCeeEECCCCC-EEEEEeCCCEEEEECCCC-
Confidence 99999998666666677899999986 3 3 21 222333345678899999995 666666678899998732
Q ss_pred CcccCCCCcCCCCCeeeEEEcCCCCCcceEEeC-CCCCcEEEEEeCCC
Q 014454 351 DEEQTPEDAEDGPPELLFIHGGHTSKISDFSWN-PCEDWVISSVAEDN 397 (424)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~-~~~~~~l~s~~~dg 397 (424)
..+..+..+...+++++|. +++..++++...++
T Consensus 261 --------------~~~~~i~~~~~~~~~~af~g~d~~~L~vt~~~~~ 294 (326)
T 2ghs_A 261 --------------NHIARYEVPGKQTTCPAFIGPDASRLLVTSAREH 294 (326)
T ss_dssp --------------CEEEEEECSCSBEEEEEEESTTSCEEEEEEBCTT
T ss_pred --------------CEEEEEECCCCCcEEEEEecCCCCEEEEEecCCC
Confidence 3344445555668999998 88876666666553
No 199
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=99.45 E-value=4.9e-11 Score=119.29 Aligned_cols=250 Identities=12% Similarity=0.121 Sum_probs=157.5
Q ss_pred cCCceeEEEecCCCCcEEEEEeC----CCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCceeEEEecCCCCceEEEEeC
Q 014454 124 HDGEVNRARYMPQNPFLIATKTV----SAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSD 199 (424)
Q Consensus 124 h~~~v~~~~~~p~~~~~latg~~----dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~ 199 (424)
|...+..++|||+++.++.+.+. ...|++||+.+ + ... ....+......++|+ +++. |+.++.
T Consensus 127 ~~~~l~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~t--------g--~~~-~~~~~~~k~~~~~Ws-Dg~~-l~y~~~ 193 (693)
T 3iuj_A 127 GTTALDQLSFSRDGRILAYSLSLAGSDWREIHLMDVES--------K--QPL-ETPLKDVKFSGISWL-GNEG-FFYSSY 193 (693)
T ss_dssp SCCEEEEEEECTTSSEEEEEEECSSCCEEEEEEEETTT--------C--SEE-EEEEEEEESCCCEEE-TTTE-EEEEES
T ss_pred CcEEEEEEEECCCCCEEEEEEecCCCceEEEEEEECCC--------C--CCC-ccccCCceeccEEEe-CCCE-EEEEEe
Confidence 34467788999999854443332 35799999987 2 211 111111113578999 8884 666666
Q ss_pred CC-------------cEEEEeCCCCCCCCcccceeeeec-CCccEeeEEEecCCCcEEEEEeCC---CeEEEEEcCCCCC
Q 014454 200 DA-------------QICLWDINAAPKNKSLEAMQIFKV-HEGVVEDVAWHLRHEYLFGSVGDD---QYLLIWDLRTPSV 262 (424)
Q Consensus 200 dg-------------~i~iwd~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~~s~~~d---g~i~i~d~~~~~~ 262 (424)
+. .|++|++.+..... ..+..... |...+..+.|+|+++.++++.+.+ ..|+++|+.++..
T Consensus 194 ~~~~~~~~~~~~~~~~v~~~~lgt~~~~~--~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~ 271 (693)
T 3iuj_A 194 DKPDGSELSARTDQHKVYFHRLGTAQEDD--RLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENA 271 (693)
T ss_dssp SCCC-------CCCCEEEEEETTSCGGGC--EEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTC
T ss_pred cCcccccccccCCCcEEEEEECCCCcccc--eEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCC
Confidence 53 39999987653211 11222222 344578899999999887766533 5899999987642
Q ss_pred CCCeeeeeccCCCeeEEEecCCCCeEEEEEeCC---CcEEEEECCCCCC-cceEecCCCCCEEEEEEcCCCCcEEEEEEC
Q 014454 263 SKPVQSVVAHQSEVNCLAFNPFNEWILATGSTD---KTVKLFDLRKIST-ALHTFDSHKEEVFQVGWNPKNETILASCCL 338 (424)
Q Consensus 263 ~~~~~~~~~~~~~v~~v~~~~~~~~~l~tg~~d---g~i~iwd~~~~~~-~~~~~~~h~~~v~~~~~sp~~~~~l~s~~~ 338 (424)
....+..+....... |++++..+++.+..+ +.|..+|+.+... ....+..|...+. .|+++++.++++...
T Consensus 272 --~~~~l~~~~~~~~~~-~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~--~~s~~g~~lv~~~~~ 346 (693)
T 3iuj_A 272 --PLLTVQGDLDADVSL-VDNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLIPERQQVL--TVHSGSGYLFAEYMV 346 (693)
T ss_dssp --CCEEEECSSSSCEEE-EEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCE--EEEEETTEEEEEEEE
T ss_pred --ceEEEeCCCCceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCCccccEEEecCCCCEE--EEEEECCEEEEEEEE
Confidence 244455555555554 666677677676554 5799999987322 1345666666665 899998766666666
Q ss_pred CC--eEEEeeCCCCCcccCCCCcCCCCCeeeEEEc-CCCCCcceEEeCCCCCcEEEEEeC---CCcEEEEecCCcc
Q 014454 339 GR--RLMVWDLSRIDEEQTPEDAEDGPPELLFIHG-GHTSKISDFSWNPCEDWVISSVAE---DNILQIWQMAENI 408 (424)
Q Consensus 339 dg--~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~-~h~~~v~~~~~~~~~~~~l~s~~~---dg~i~vw~~~~~~ 408 (424)
++ .|++|++.... ...+. .....+..+.++++++.++++.+. -+.+..||+.++.
T Consensus 347 ~g~~~l~~~d~~g~~---------------~~~l~~p~~~~~~~~~~~~d~~~l~~~~ss~~tP~~l~~~d~~~g~ 407 (693)
T 3iuj_A 347 DATARVEQFDYEGKR---------------VREVALPGLGSVSGFNGKHDDPALYFGFENYAQPPTLYRFEPKSGA 407 (693)
T ss_dssp TTEEEEEEECTTSCE---------------EEEECCSSSSEEEECCCCTTCSCEEEEEECSSSCCEEEEECTTTCC
T ss_pred CCeeEEEEEECCCCe---------------eEEeecCCCceEEeeecCCCCCEEEEEecCCCCCCEEEEEECCCCe
Confidence 76 57888876421 11221 233456777888888866655443 2789999987764
No 200
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.43 E-value=5.8e-10 Score=99.16 Aligned_cols=242 Identities=5% Similarity=-0.038 Sum_probs=161.4
Q ss_pred cCCceeEEEecCCCCcEEEEEeCCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCceeEEEecCCCCceEEEEeCCCcE
Q 014454 124 HDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDDAQI 203 (424)
Q Consensus 124 h~~~v~~~~~~p~~~~~latg~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i 203 (424)
....+.++++.+++. +.++...++.|.+|+.... .. ...+..+...+.++++.+++. ++++...++.|
T Consensus 18 ~~~~p~~i~~d~~g~-l~v~~~~~~~v~~~~~~~~---------~~-~~~~~~~~~~~~~i~~~~~g~-l~v~~~~~~~v 85 (300)
T 2qc5_A 18 PDSGPYGITSSEDGK-VWFTQHKANKISSLDQSGR---------IK-EFEVPTPDAKVMCLIVSSLGD-IWFTENGANKI 85 (300)
T ss_dssp TTCCEEEEEECTTSC-EEEEETTTTEEEEECTTSC---------EE-EEECSSTTCCEEEEEECTTSC-EEEEETTTTEE
T ss_pred CCCCcceeeECCCCC-EEEEcCCCCeEEEECCCCc---------eE-EEECCCCCCcceeEEECCCCC-EEEEecCCCeE
Confidence 345788999999886 6666566789999987620 10 112223346788999998776 56666567889
Q ss_pred EEEeCCCCCCCCcccceeeeecCCccEeeEEEecCCCcEEEEEeCCCeEEEEEcCCCCCCCCeeeeeccCCCeeEEEecC
Q 014454 204 CLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNP 283 (424)
Q Consensus 204 ~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~v~~~~ 283 (424)
..+|.. +.. .. .........+.++++.+++. ++++...++.|..+|.. +.. ...........+..+++++
T Consensus 86 ~~~d~~-g~~----~~-~~~~~~~~~~~~i~~~~~g~-l~v~~~~~~~i~~~~~~-g~~--~~~~~~~~~~~~~~i~~d~ 155 (300)
T 2qc5_A 86 GKLSKK-GGF----TE-YPLPQPDSGPYGITEGLNGD-IWFTQLNGDRIGKLTAD-GTI--YEYDLPNKGSYPAFITLGS 155 (300)
T ss_dssp EEECTT-SCE----EE-EECSSTTCCEEEEEECSTTC-EEEEETTTTEEEEECTT-SCE--EEEECSSTTCCEEEEEECT
T ss_pred EEECCC-CCe----EE-ecCCCCCCCCccceECCCCC-EEEEccCCCeEEEECCC-CCE--EEccCCCCCCCceeEEECC
Confidence 999986 321 11 11122335788999998875 66566668899999986 432 1111222346789999999
Q ss_pred CCCeEEEEEeCCCcEEEEECCCCCCcce-EecCCCCCEEEEEEcCCCCcEEEEEECCCeEEEeeCCCCCcccCCCCcCCC
Q 014454 284 FNEWILATGSTDKTVKLFDLRKISTALH-TFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPEDAEDG 362 (424)
Q Consensus 284 ~~~~~l~tg~~dg~i~iwd~~~~~~~~~-~~~~h~~~v~~~~~sp~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~ 362 (424)
++. ++++...++.|..||.. +.... ....+...+..+++++++. ++++....+.|.+|+.. +.
T Consensus 156 ~g~-l~v~~~~~~~i~~~~~~--g~~~~~~~~~~~~~~~~i~~d~~g~-l~v~~~~~~~i~~~~~~-g~----------- 219 (300)
T 2qc5_A 156 DNA-LWFTENQNNSIGRITNT--GKLEEYPLPTNAAAPVGITSGNDGA-LWFVEIMGNKIGRITTT-GE----------- 219 (300)
T ss_dssp TSS-EEEEETTTTEEEEECTT--CCEEEEECSSTTCCEEEEEECTTSS-EEEEETTTTEEEEECTT-CC-----------
T ss_pred CCC-EEEEecCCCeEEEECCC--CcEEEeeCCCCCCCcceEEECCCCC-EEEEccCCCEEEEEcCC-Cc-----------
Confidence 887 66666667889999983 33222 2223445789999999884 66666667789999973 21
Q ss_pred CCeeeEEEcCCCCCcceEEeCCCCCcEEEEEeCCCcEEEEecCC
Q 014454 363 PPELLFIHGGHTSKISDFSWNPCEDWVISSVAEDNILQIWQMAE 406 (424)
Q Consensus 363 ~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~vw~~~~ 406 (424)
........+...+.++++++++. +.++...++.|..|+...
T Consensus 220 --~~~~~~~~~~~~~~~i~~d~~g~-l~v~~~~~~~i~~~~~~g 260 (300)
T 2qc5_A 220 --ISEYDIPTPNARPHAITAGKNSE-IWFTEWGANQIGRITNDN 260 (300)
T ss_dssp --EEEEECSSTTCCEEEEEECSTTC-EEEEETTTTEEEEECTTS
T ss_pred --EEEEECCCCCCCceEEEECCCCC-EEEeccCCCeEEEECCCC
Confidence 11122223445688999999998 777766678899999843
No 201
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.42 E-value=9.8e-12 Score=113.60 Aligned_cols=178 Identities=14% Similarity=0.038 Sum_probs=125.3
Q ss_pred ceeEEEecCCCCceEEEEeCCCcEEEEeCCCCC-----CCCcccceeeeecCCccEeeEEEecCCCcEEEEEeCCCeEEE
Q 014454 180 EGYGLSWSKFKEGHLLSGSDDAQICLWDINAAP-----KNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLI 254 (424)
Q Consensus 180 ~v~~l~~~~~~~~~l~s~~~dg~i~iwd~~~~~-----~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~dg~i~i 254 (424)
.++.|++++... ++++|+.++ +.+|++.... ....+.+.... .+.. |+.++| ++. .++++ .++.|++
T Consensus 39 ~~nlLais~~~g-ll~a~~~~~-l~v~~~~~l~~~~~~~~~~~~~~~~~-~lp~-V~~l~f--d~~-~L~v~-~~~~l~v 110 (388)
T 1xip_A 39 SLQNLDISNSKS-LFVAASGSK-AVVGELQLLRDHITSDSTPLTFKWEK-EIPD-VIFVCF--HGD-QVLVS-TRNALYS 110 (388)
T ss_dssp CCBCEEEETTTT-EEEEEETTE-EEEEEHHHHHHHHHSSSCCCCCSEEE-ECTT-EEEEEE--ETT-EEEEE-ESSEEEE
T ss_pred cccEEEEcCCCC-EEEEeCCCE-EEEEEhhHhhhhhccccccccceEEe-eCCC-eeEEEE--CCC-EEEEE-cCCcEEE
Confidence 578899999776 788888874 5569875432 00012221222 3566 999999 665 44466 8899999
Q ss_pred EEcCCCCCCCCeeeeeccCCCeeEEEecCCCCeEEEEEeCCCcEEEEECCCCCCcceEecCCCCCEEEEEEcCCCCcEEE
Q 014454 255 WDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATGSTDKTVKLFDLRKISTALHTFDSHKEEVFQVGWNPKNETILA 334 (424)
Q Consensus 255 ~d~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~l~ 334 (424)
||+++... ......+..++.++.+.+. . +|+++.||.|.+||+.. +.... +...|++++|||.| ++
T Consensus 111 ~dv~sl~~---~~~~~~~~~~v~~i~~~~p--~-~av~~~dG~L~v~dl~~-~~~~~----~~~~Vs~v~WSpkG---~~ 176 (388)
T 1xip_A 111 LDLEELSE---FRTVTSFEKPVFQLKNVNN--T-LVILNSVNDLSALDLRT-KSTKQ----LAQNVTSFDVTNSQ---LA 176 (388)
T ss_dssp EESSSTTC---EEEEEECSSCEEEEEECSS--E-EEEEETTSEEEEEETTT-CCEEE----EEESEEEEEECSSE---EE
T ss_pred EEchhhhc---cCccceeecceeeEEecCC--C-EEEEECCCCEEEEEccC-Ccccc----ccCCceEEEEcCCc---eE
Confidence 99988653 4445567778888877653 3 78889999999999997 33322 45689999999998 57
Q ss_pred EEECCCeEEEeeCCCCCcccCCCCcCCCCCeeeEEE------c---CCCCCcceEEeCCCCCcEEEE
Q 014454 335 SCCLGRRLMVWDLSRIDEEQTPEDAEDGPPELLFIH------G---GHTSKISDFSWNPCEDWVISS 392 (424)
Q Consensus 335 s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~------~---~h~~~v~~~~~~~~~~~~l~s 392 (424)
.|..||.+++|+....... ....+ . +|...|.++.|.+++.+ +++
T Consensus 177 vg~~dg~i~~~~~~~~~~~------------~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~~f-lv~ 230 (388)
T 1xip_A 177 VLLKDRSFQSFAWRNGEME------------KQFEFSLPSELEELPVEEYSPLSVTILSPQDF-LAV 230 (388)
T ss_dssp EEETTSCEEEEEEETTEEE------------EEEEECCCHHHHTSCTTTSEEEEEEESSSSEE-EEE
T ss_pred EEEcCCcEEEEcCCCcccc------------ccceecCCcccccccCCCeeEEEEEEecCCeE-EEE
Confidence 7999999999987654210 02222 2 46788999999999885 444
No 202
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.40 E-value=1.4e-09 Score=99.97 Aligned_cols=249 Identities=10% Similarity=-0.052 Sum_probs=154.0
Q ss_pred EEeccCCceeEEEecCCCCcEEEEEe---------CCCeEEEEeCCCCCCCCCCCCCCCCcEEEecC-------CCceeE
Q 014454 120 QQINHDGEVNRARYMPQNPFLIATKT---------VSAEVYVFDYSKHPSKPPLDGACSPDLRLRGH-------STEGYG 183 (424)
Q Consensus 120 ~~~~h~~~v~~~~~~p~~~~~latg~---------~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~h-------~~~v~~ 183 (424)
..+.-.... .++++|+++.+.++.. .++.|.+||..+ .+....+.-. ......
T Consensus 61 ~~i~~g~~p-~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t----------~~~~~~i~~~~~~~~~~g~~p~~ 129 (373)
T 2mad_H 61 GHVNGGFLP-NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVT----------FLPIADIELPDAPRFDVGPYSWM 129 (373)
T ss_pred EEecCCCCC-CeEECCCCCEEEEEeccccccccCCCCCeEEEEECCC----------CcEEEEEECCCccccccCCCccc
Confidence 344433333 8999999986555532 367899999976 2323332211 123458
Q ss_pred EEecCCCCceEEEEeC--CCcEEEEeCCCCCCCCcccceee-eecCCccEeeEEEecCCCcEEEEEeCCCeEEEEEcCCC
Q 014454 184 LSWSKFKEGHLLSGSD--DAQICLWDINAAPKNKSLEAMQI-FKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTP 260 (424)
Q Consensus 184 l~~~~~~~~~l~s~~~--dg~i~iwd~~~~~~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~~~~s~~~dg~i~i~d~~~~ 260 (424)
+.|+|+++ +|+++.. ++.|.++| .+++.. .. +. ... ++.+.|.++..+++.+.||.+.++|. ++
T Consensus 130 ~~~spDG~-~l~v~n~~~~~~v~viD-~t~~~~------~~~i~-~~~---~~~~~~~~~~~~~~~~~dg~~~~vd~-~g 196 (373)
T 2mad_H 130 NANTPNNA-DLLFFQFAAGPAVGLVV-QGGSSD------DQLLS-SPT---CYHIHPGAPSTFYLLCAQGGLAKTDH-AG 196 (373)
T ss_pred eEECCCCC-EEEEEecCCCCeEEEEE-CCCCEE------eEEcC-CCc---eEEEEeCCCceEEEEcCCCCEEEEEC-CC
Confidence 99999998 5666653 57899999 776432 22 11 111 24566777777888889999999999 65
Q ss_pred CCCCCeeeee-----ccCCCe-eEEEecCCCCeEEEEEeCCCcEEEEECCCCC-CcceEecC----------CCCCEEEE
Q 014454 261 SVSKPVQSVV-----AHQSEV-NCLAFNPFNEWILATGSTDKTVKLFDLRKIS-TALHTFDS----------HKEEVFQV 323 (424)
Q Consensus 261 ~~~~~~~~~~-----~~~~~v-~~v~~~~~~~~~l~tg~~dg~i~iwd~~~~~-~~~~~~~~----------h~~~v~~~ 323 (424)
+. ..... ....++ ....+.+++..++++. ..+.+.+.|+.... ..+..+.. .......+
T Consensus 197 ~~---~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~-~~~~v~vid~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~~ 272 (373)
T 2mad_H 197 GA---AGAGLVGAMLTAAQNLLTQPAQANKSGRIVWPV-YSGKILQADISAAGATNKAPIDALSGGRKADTWRPGGWQQV 272 (373)
T ss_pred cE---EEEEeccccccCCcceeecceeEecCCEEEEEc-CCceEEEEeccCCcceEeeeeeecCCcccccceecCceEeE
Confidence 53 21111 111221 2345666665544444 67899999997522 11222211 12234457
Q ss_pred EEcCCCCcEEEEEE---------CCCeEEEeeCCCCCcccCCCCcCCCCCeeeEEEcCCCCCcceEEeCCCCCcEEEEEe
Q 014454 324 GWNPKNETILASCC---------LGRRLMVWDLSRIDEEQTPEDAEDGPPELLFIHGGHTSKISDFSWNPCEDWVISSVA 394 (424)
Q Consensus 324 ~~sp~~~~~l~s~~---------~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~ 394 (424)
+++|++..++++.. .++.|.++|+.+. +.+..+.. .....+++|+|+++++++++.
T Consensus 273 ~~s~d~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~--------------~vv~~i~~-g~~p~~i~~s~Dg~~~l~v~~ 337 (373)
T 2mad_H 273 AYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVG--------------QTSSQISL-GHDVDAISVAQDGGPDLYALS 337 (373)
T ss_pred EECCCCCEEEEEeccCCcccccCCCCeEEEEECCCC--------------EEEEEEEC-CCCcCeEEECCCCCeEEEEEc
Confidence 88999876555543 2357999999875 33444432 224789999999995566666
Q ss_pred -CCCcEEEEecCCccCCC
Q 014454 395 -EDNILQIWQMAENIYHD 411 (424)
Q Consensus 395 -~dg~i~vw~~~~~~~~~ 411 (424)
.++.|.|+|+.++....
T Consensus 338 ~~~~~V~ViD~~t~~vv~ 355 (373)
T 2mad_H 338 AGTEVLHIYDAGAGDQDQ 355 (373)
T ss_pred CCCCeEEEEECCCCCEEe
Confidence 58999999999876543
No 203
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.40 E-value=4e-11 Score=120.08 Aligned_cols=205 Identities=9% Similarity=0.008 Sum_probs=130.6
Q ss_pred cCCCceeEEEecCCCCceEE-E----EeCCCcEEEEeCCCCCCCCcccceeeeecCCccEeeEEEecCCCcEEEEEeCCC
Q 014454 176 GHSTEGYGLSWSKFKEGHLL-S----GSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQ 250 (424)
Q Consensus 176 ~h~~~v~~l~~~~~~~~~l~-s----~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~dg 250 (424)
+|...+.+++|||+|+ +|+ + |+.+..|++||+.++..... ..+. ......++|+|+++.++ .++.|.
T Consensus 118 ~~~~~~~~~~~SPDG~-~la~~~~~~G~~~~~i~v~dl~tg~~~~~----~~~~--~~~~~~~~wspDg~~l~-~~~~d~ 189 (695)
T 2bkl_A 118 DGTVSLGTWAVSWDGK-KVAFAQKPNAADEAVLHVIDVDSGEWSKV----DVIE--GGKYATPKWTPDSKGFY-YEWLPT 189 (695)
T ss_dssp SSCEEEEEEEECTTSS-EEEEEEEETTCSCCEEEEEETTTCCBCSS----CCBS--CCTTCCCEECTTSSEEE-EEECCC
T ss_pred CCCEEEEEEEECCCCC-EEEEEECCCCCceEEEEEEECCCCCCcCC----cccC--cccccceEEecCCCEEE-EEEecC
Confidence 3555789999999998 455 3 33456899999988753200 0111 11126899999998665 566655
Q ss_pred e-------------EEEEEcCCCCCC-CCeeeeeccCCCeeEEEecCCCCeEEEEEeCC-C--cEEEEECCCCCCcceEe
Q 014454 251 Y-------------LLIWDLRTPSVS-KPVQSVVAHQSEVNCLAFNPFNEWILATGSTD-K--TVKLFDLRKISTALHTF 313 (424)
Q Consensus 251 ~-------------i~i~d~~~~~~~-~~~~~~~~~~~~v~~v~~~~~~~~~l~tg~~d-g--~i~iwd~~~~~~~~~~~ 313 (424)
. |++|++.++... ..+.....+...+..+.|+|+|++++++.... + .|.++|... .....+
T Consensus 190 ~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~l~~~~~~~--~~~~~l 267 (695)
T 2bkl_A 190 DPSIKVDERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDGKYLFVYILRGWSENDVYWKRPGE--KDFRLL 267 (695)
T ss_dssp CTTSCGGGGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEECTTSCCEEEEEEETTTEEEEEEECTTC--SSCEEE
T ss_pred CCCCccccCCCCCEEEEEECCCCchhceEEEecCCCCEEEEEEEECCCCCEEEEEEeCCCCceEEEEEcCCC--CceEEe
Confidence 5 999999876521 11222233456788999999999755554433 3 566665443 345556
Q ss_pred cCCCCCEEEEEEcCCCCcEEEEEE---CCCeEEEeeCCCCCcccCCCCcCCCCCeeeEEEcCC-CCCcceEEeCCCCCcE
Q 014454 314 DSHKEEVFQVGWNPKNETILASCC---LGRRLMVWDLSRIDEEQTPEDAEDGPPELLFIHGGH-TSKISDFSWNPCEDWV 389 (424)
Q Consensus 314 ~~h~~~v~~~~~sp~~~~~l~s~~---~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h-~~~v~~~~~~~~~~~~ 389 (424)
..+...+....| +++. +++.+. .++.|.+||+...... ........+ ...+.+++|+ ++. +
T Consensus 268 ~~~~~~~~~~~~-~~g~-l~~~s~~~~~~~~l~~~d~~~~~~~-----------~~~~l~~~~~~~~l~~~~~~-~~~-l 332 (695)
T 2bkl_A 268 VKGVGAKYEVHA-WKDR-FYVLTDEGAPRQRVFEVDPAKPARA-----------SWKEIVPEDSSASLLSVSIV-GGH-L 332 (695)
T ss_dssp EECSSCCEEEEE-ETTE-EEEEECTTCTTCEEEEEBTTBCSGG-----------GCEEEECCCSSCEEEEEEEE-TTE-E
T ss_pred ecCCCceEEEEe-cCCc-EEEEECCCCCCCEEEEEeCCCCCcc-----------CCeEEecCCCCCeEEEEEEE-CCE-E
Confidence 566666777777 6675 666655 2578999998764210 111222222 3457788888 444 8
Q ss_pred EEEEeCCCcEEEEecC
Q 014454 390 ISSVAEDNILQIWQMA 405 (424)
Q Consensus 390 l~s~~~dg~i~vw~~~ 405 (424)
+++...|+..+||.+.
T Consensus 333 v~~~~~dg~~~l~~~~ 348 (695)
T 2bkl_A 333 SLEYLKDATSEVRVAT 348 (695)
T ss_dssp EEEEEETTEEEEEEEE
T ss_pred EEEEEECCEEEEEEEe
Confidence 8999999998888665
No 204
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.39 E-value=1.2e-10 Score=102.12 Aligned_cols=199 Identities=8% Similarity=-0.034 Sum_probs=138.3
Q ss_pred CCceeEEEecCCCCcEEEEEeCCCeEEEEeCCCCCCCCCCCCCCCCcEEEe-cCCCceeEEEecCCCCceEEEEeCCCcE
Q 014454 125 DGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLR-GHSTEGYGLSWSKFKEGHLLSGSDDAQI 203 (424)
Q Consensus 125 ~~~v~~~~~~p~~~~~latg~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~-~h~~~v~~l~~~~~~~~~l~s~~~dg~i 203 (424)
...+.++++.+++. ++++.. ++.|.+|+.... ....+. .....+.++++.+++. ++++...++.|
T Consensus 66 ~~~p~~i~~~~~g~-l~v~~~-~~~i~~~d~~~~-----------~~~~~~~~~~~~p~~i~~~~~g~-l~v~~~~~~~i 131 (270)
T 1rwi_B 66 LYQPQGLAVDGAGT-VYVTDF-NNRVVTLAAGSN-----------NQTVLPFDGLNYPEGLAVDTQGA-VYVADRGNNRV 131 (270)
T ss_dssp CCSCCCEEECTTCC-EEEEET-TTEEEEECTTCS-----------CCEECCCCSCSSEEEEEECTTCC-EEEEEGGGTEE
T ss_pred cCCcceeEECCCCC-EEEEcC-CCEEEEEeCCCc-----------eEeeeecCCcCCCcceEECCCCC-EEEEECCCCEE
Confidence 35678899999886 566555 889999997651 112222 2235688999999876 66766778899
Q ss_pred EEEeCCCCCCCCcccceeeeecCCccEeeEEEecCCCcEEEEEeCCCeEEEEEcCCCCCCCCeeeeeccCCCeeEEEecC
Q 014454 204 CLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNP 283 (424)
Q Consensus 204 ~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~v~~~~ 283 (424)
.+|+..+... ..........+.++++++++. ++++...++.|.+||...... ......+...+..|++++
T Consensus 132 ~~~~~~~~~~------~~~~~~~~~~p~~i~~~~~g~-l~v~~~~~~~i~~~~~~~~~~---~~~~~~~~~~p~~i~~d~ 201 (270)
T 1rwi_B 132 VKLAAGSKTQ------TVLPFTGLNDPDGVAVDNSGN-VYVTDTDNNRVVKLEAESNNQ---VVLPFTDITAPWGIAVDE 201 (270)
T ss_dssp EEECTTCCSC------EECCCCSCCSCCCEEECTTCC-EEEEEGGGTEEEEECTTTCCE---EECCCSSCCSEEEEEECT
T ss_pred EEEECCCcee------EeeccccCCCceeEEEeCCCC-EEEEECCCCEEEEEecCCCce---EeecccCCCCceEEEECC
Confidence 9997644321 111112234678899999886 776777788999999876442 111122336788999999
Q ss_pred CCCeEEEEEeCCCcEEEEECCCCCCcceEecCCCCCEEEEEEcCCCCcEEEEEECCCeEEEeeCCCC
Q 014454 284 FNEWILATGSTDKTVKLFDLRKISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRI 350 (424)
Q Consensus 284 ~~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~l~s~~~dg~i~iwd~~~~ 350 (424)
+|. ++++...++.|.+||... .........+-..+.++++++++. ++++...++.|+++++...
T Consensus 202 ~g~-l~v~~~~~~~v~~~~~~~-~~~~~~~~~~~~~p~~i~~~~~g~-l~v~~~~~~~v~~~~~~~~ 265 (270)
T 1rwi_B 202 AGT-VYVTEHNTNQVVKLLAGS-TTSTVLPFTGLNTPLAVAVDSDRT-VYVADRGNDRVVKLTSLEH 265 (270)
T ss_dssp TCC-EEEEETTTSCEEEECTTC-SCCEECCCCSCSCEEEEEECTTCC-EEEEEGGGTEEEEECCCGG
T ss_pred CCC-EEEEECCCCcEEEEcCCC-CcceeeccCCCCCceeEEECCCCC-EEEEECCCCEEEEEcCCCc
Confidence 884 777777788999999875 222222222335789999999995 8888888999999998764
No 205
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.39 E-value=1.6e-09 Score=96.22 Aligned_cols=238 Identities=5% Similarity=-0.060 Sum_probs=155.4
Q ss_pred CCceeEEEecCCCCcEEEEEeCCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCceeEEEecCCCCceEEEEeCCCcEE
Q 014454 125 DGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDDAQIC 204 (424)
Q Consensus 125 ~~~v~~~~~~p~~~~~latg~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~ 204 (424)
...+.++++.+++. +.++...++.|..||... ......+......+.++++.+++. ++++...++.|.
T Consensus 61 ~~~~~~i~~~~~g~-l~v~~~~~~~v~~~d~~g----------~~~~~~~~~~~~~~~~i~~~~~g~-l~v~~~~~~~i~ 128 (300)
T 2qc5_A 61 DAKVMCLIVSSLGD-IWFTENGANKIGKLSKKG----------GFTEYPLPQPDSGPYGITEGLNGD-IWFTQLNGDRIG 128 (300)
T ss_dssp TCCEEEEEECTTSC-EEEEETTTTEEEEECTTS----------CEEEEECSSTTCCEEEEEECSTTC-EEEEETTTTEEE
T ss_pred CCcceeEEECCCCC-EEEEecCCCeEEEECCCC----------CeEEecCCCCCCCCccceECCCCC-EEEEccCCCeEE
Confidence 36788999999886 666655678899998763 111112222346688999998776 566666678999
Q ss_pred EEeCCCCCCCCcccceeeeecCCccEeeEEEecCCCcEEEEEeCCCeEEEEEcCCCCCCCCeeeeeccCCCeeEEEecCC
Q 014454 205 LWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPF 284 (424)
Q Consensus 205 iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~v~~~~~ 284 (424)
.+|.. +.. .. .........+..+++.+++. ++++...++.|..+|. ++... ..........+..++++++
T Consensus 129 ~~~~~-g~~----~~-~~~~~~~~~~~~i~~d~~g~-l~v~~~~~~~i~~~~~-~g~~~--~~~~~~~~~~~~~i~~d~~ 198 (300)
T 2qc5_A 129 KLTAD-GTI----YE-YDLPNKGSYPAFITLGSDNA-LWFTENQNNSIGRITN-TGKLE--EYPLPTNAAAPVGITSGND 198 (300)
T ss_dssp EECTT-SCE----EE-EECSSTTCCEEEEEECTTSS-EEEEETTTTEEEEECT-TCCEE--EEECSSTTCCEEEEEECTT
T ss_pred EECCC-CCE----EE-ccCCCCCCCceeEEECCCCC-EEEEecCCCeEEEECC-CCcEE--EeeCCCCCCCcceEEECCC
Confidence 99886 321 10 11222345788999999886 6666666789999998 43321 1112233456889999998
Q ss_pred CCeEEEEEeCCCcEEEEECCCCCCcce-EecCCCCCEEEEEEcCCCCcEEEEEECCCeEEEeeCCCCCcccCCCCcCCCC
Q 014454 285 NEWILATGSTDKTVKLFDLRKISTALH-TFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPEDAEDGP 363 (424)
Q Consensus 285 ~~~~l~tg~~dg~i~iwd~~~~~~~~~-~~~~h~~~v~~~~~sp~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~ 363 (424)
+. ++++....+.|.+||.. +.... ....+...+.++++++++. ++++...++.|..|+.. +.
T Consensus 199 g~-l~v~~~~~~~i~~~~~~--g~~~~~~~~~~~~~~~~i~~d~~g~-l~v~~~~~~~i~~~~~~-g~------------ 261 (300)
T 2qc5_A 199 GA-LWFVEIMGNKIGRITTT--GEISEYDIPTPNARPHAITAGKNSE-IWFTEWGANQIGRITND-NT------------ 261 (300)
T ss_dssp SS-EEEEETTTTEEEEECTT--CCEEEEECSSTTCCEEEEEECSTTC-EEEEETTTTEEEEECTT-SC------------
T ss_pred CC-EEEEccCCCEEEEEcCC--CcEEEEECCCCCCCceEEEECCCCC-EEEeccCCCeEEEECCC-Cc------------
Confidence 86 66666667789999983 33222 2333456789999999985 66666667889999973 21
Q ss_pred CeeeEEEcCCCCCcceEEeCCCCCcEEEEEeCCCcEEEEecC
Q 014454 364 PELLFIHGGHTSKISDFSWNPCEDWVISSVAEDNILQIWQMA 405 (424)
Q Consensus 364 ~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~vw~~~ 405 (424)
...+........+.++++.+++. ++++.. . .|..+++.
T Consensus 262 -~~~~~~~~~~~~~~~i~~~~~g~-l~v~~~-~-~i~~~~p~ 299 (300)
T 2qc5_A 262 -IQEYQLQTENAEPHGITFGKDGS-VWFALK-C-KIGKLNLN 299 (300)
T ss_dssp -EEEEECCSTTCCCCCEEECTTSC-EEEECS-S-EEEEEEEC
T ss_pred -EEEEECCccCCccceeEeCCCCC-EEEEcc-C-ceEEeCCC
Confidence 11122233345688999999998 566544 4 67666653
No 206
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.32 E-value=2.9e-10 Score=102.88 Aligned_cols=202 Identities=6% Similarity=0.003 Sum_probs=133.9
Q ss_pred EEEeccCCceeEEEecCCCCcEEEEEeCCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCC-----CceeEEEecCCCCce
Q 014454 119 IQQINHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHS-----TEGYGLSWSKFKEGH 193 (424)
Q Consensus 119 ~~~~~h~~~v~~~~~~p~~~~~latg~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~h~-----~~v~~l~~~~~~~~~ 193 (424)
+..+.....+..+++++++ .++++...++.|.+||..+ .+....+.... .....+++ ++..+
T Consensus 77 ~~~i~~~~~p~~i~~~~~g-~lyv~~~~~~~v~~iD~~t----------~~~~~~i~~g~~~~~~~~p~~i~~--~~~~l 143 (328)
T 3dsm_A 77 VGRITGFTSPRYIHFLSDE-KAYVTQIWDYRIFIINPKT----------YEITGYIECPDMDMESGSTEQMVQ--YGKYV 143 (328)
T ss_dssp EEEEECCSSEEEEEEEETT-EEEEEEBSCSEEEEEETTT----------TEEEEEEECTTCCTTTCBCCCEEE--ETTEE
T ss_pred EEEcCCCCCCcEEEEeCCC-eEEEEECCCCeEEEEECCC----------CeEEEEEEcCCccccCCCcceEEE--ECCEE
Confidence 3445556788999999887 4666655789999999886 22233333222 14567777 34434
Q ss_pred EEEEe-CCCcEEEEeCCCCCCCCcccceeeeecCCccEeeEEEecCCCcEEEEEeCC----------CeEEEEEcCCCCC
Q 014454 194 LLSGS-DDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDD----------QYLLIWDLRTPSV 262 (424)
Q Consensus 194 l~s~~-~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~d----------g~i~i~d~~~~~~ 262 (424)
+++.. .++.|.++|+.+++. ...+.. ......++++|+++ +++++..+ +.|.++|..+.+.
T Consensus 144 yv~~~~~~~~v~viD~~t~~~------~~~i~~-g~~p~~i~~~~dG~-l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v 215 (328)
T 3dsm_A 144 YVNCWSYQNRILKIDTETDKV------VDELTI-GIQPTSLVMDKYNK-MWTITDGGYEGSPYGYEAPSLYRIDAETFTV 215 (328)
T ss_dssp EEEECTTCCEEEEEETTTTEE------EEEEEC-SSCBCCCEECTTSE-EEEEBCCBCTTCSSCBCCCEEEEEETTTTEE
T ss_pred EEEcCCCCCEEEEEECCCCeE------EEEEEc-CCCccceEEcCCCC-EEEEECCCccCCccccCCceEEEEECCCCeE
Confidence 44443 488999999987632 222222 33457899999886 55555444 7899999987653
Q ss_pred CCCeeeeecc-CCCeeEEEecCCCCeEEEEEeCCCcEEEEECCCCCCcce-E-ecCCCCCEEEEEEcCCCCcEEEEE---
Q 014454 263 SKPVQSVVAH-QSEVNCLAFNPFNEWILATGSTDKTVKLFDLRKISTALH-T-FDSHKEEVFQVGWNPKNETILASC--- 336 (424)
Q Consensus 263 ~~~~~~~~~~-~~~v~~v~~~~~~~~~l~tg~~dg~i~iwd~~~~~~~~~-~-~~~h~~~v~~~~~sp~~~~~l~s~--- 336 (424)
...+... ......++++|+++.++ ++.. .|.+||..+ ++... . +..+......++++|++..++++.
T Consensus 216 ---~~~~~~~~g~~p~~la~~~d~~~ly-v~~~--~v~~~d~~t-~~~~~~~~~~~~~~~p~gi~vdp~~g~lyva~~~~ 288 (328)
T 3dsm_A 216 ---EKQFKFKLGDWPSEVQLNGTRDTLY-WINN--DIWRMPVEA-DRVPVRPFLEFRDTKYYGLTVNPNNGEVYVADAID 288 (328)
T ss_dssp ---EEEEECCTTCCCEEEEECTTSCEEE-EESS--SEEEEETTC-SSCCSSCSBCCCSSCEEEEEECTTTCCEEEEECTT
T ss_pred ---EEEEecCCCCCceeEEEecCCCEEE-EEcc--EEEEEECCC-CceeeeeeecCCCCceEEEEEcCCCCeEEEEcccc
Confidence 3333221 24689999999998644 4433 899999986 33321 1 222246789999999666677777
Q ss_pred -ECCCeEEEeeCC
Q 014454 337 -CLGRRLMVWDLS 348 (424)
Q Consensus 337 -~~dg~i~iwd~~ 348 (424)
..++.|.+||..
T Consensus 289 y~~~~~V~v~d~~ 301 (328)
T 3dsm_A 289 YQQQGIVYRYSPQ 301 (328)
T ss_dssp SSSEEEEEEECTT
T ss_pred cccCCEEEEECCC
Confidence 678899999987
No 207
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.29 E-value=1.7e-09 Score=96.74 Aligned_cols=229 Identities=11% Similarity=0.041 Sum_probs=146.4
Q ss_pred ccCCceeEEEecCCCCcEEEEEeCCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCceeEEEecCCCCceEEEEeCCCc
Q 014454 123 NHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDDAQ 202 (424)
Q Consensus 123 ~h~~~v~~~~~~p~~~~~latg~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~ 202 (424)
..........|+|++..+++++..++.|..|+... . ...+..+...+.++++++++. ++++...++.
T Consensus 42 ~~~~~~egp~~~~~g~~l~~~d~~~~~i~~~~~~g-----------~-~~~~~~~~~~~~gl~~d~dG~-l~v~~~~~~~ 108 (305)
T 3dr2_A 42 DQATWSEGPAWWEAQRTLVWSDLVGRRVLGWREDG-----------T-VDVLLDATAFTNGNAVDAQQR-LVHCEHGRRA 108 (305)
T ss_dssp CCCSSEEEEEEEGGGTEEEEEETTTTEEEEEETTS-----------C-EEEEEESCSCEEEEEECTTSC-EEEEETTTTE
T ss_pred cCCcCccCCeEeCCCCEEEEEECCCCEEEEEeCCC-----------C-EEEEeCCCCccceeeECCCCC-EEEEECCCCE
Confidence 45566778999999877888888899999998743 1 234555667789999999887 5555555678
Q ss_pred EEEEeCCCCCCCCccccee-eeec-CCccEeeEEEecCCCcEEEE----EeC-------------CCeEEEEEcCCCCCC
Q 014454 203 ICLWDINAAPKNKSLEAMQ-IFKV-HEGVVEDVAWHLRHEYLFGS----VGD-------------DQYLLIWDLRTPSVS 263 (424)
Q Consensus 203 i~iwd~~~~~~~~~~~~~~-~~~~-~~~~v~~~~~~~~~~~~~~s----~~~-------------dg~i~i~d~~~~~~~ 263 (424)
|.+|+.. +.. ..+. ...+ ....++++++++++. ++++ |.. .+.|..+|..+++.
T Consensus 109 v~~~~~~-g~~----~~~~~~~~~~~~~~~~~i~~d~dG~-l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~- 181 (305)
T 3dr2_A 109 ITRSDAD-GQA----HLLVGRYAGKRLNSPNDLIVARDGA-IWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPL- 181 (305)
T ss_dssp EEEECTT-SCE----EEEECEETTEECSCCCCEEECTTSC-EEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCC-
T ss_pred EEEECCC-CCE----EEEEeccCCCccCCCCCEEECCCCC-EEEeCcCCCccccccccccccccCCCeEEEEcCCCCcE-
Confidence 9999975 321 1111 1111 123577899999986 5544 221 25677777766552
Q ss_pred CCeeeeeccCCCeeEEEecCCCCeEEEEEeC-----CCcEEEEECCCCCCcce---Ee-cCCCCCEEEEEEcCCCCcEEE
Q 014454 264 KPVQSVVAHQSEVNCLAFNPFNEWILATGST-----DKTVKLFDLRKISTALH---TF-DSHKEEVFQVGWNPKNETILA 334 (424)
Q Consensus 264 ~~~~~~~~~~~~v~~v~~~~~~~~~l~tg~~-----dg~i~iwd~~~~~~~~~---~~-~~h~~~v~~~~~sp~~~~~l~ 334 (424)
..+. .....+.++|+|++..++++.+. .+.|.+||+.... +. .+ .........++++++|. +.+
T Consensus 182 ---~~~~-~~~~p~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~--l~~~~~~~~~~~~~pdgi~~d~~G~-lwv 254 (305)
T 3dr2_A 182 ---QRMA-DLDHPNGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGA--LHDRRHFASVPDGLPDGFCVDRGGW-LWS 254 (305)
T ss_dssp ---EEEE-EESSEEEEEECTTSSEEEEEECCC---CCCEEEEEEEETTE--EEEEEEEECCSSSCCCSEEECTTSC-EEE
T ss_pred ---EEEe-cCCCCcceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCCC--ccCCeEEEECCCCCCCeEEECCCCC-EEE
Confidence 2222 34467889999999854444433 2789999987522 11 11 11234456789999996 444
Q ss_pred EEECCCeEEEeeCCCCCcccCCCCcCCCCCeeeEEEcCCCCCcceEEeCCCCCcEEEEEeCCC
Q 014454 335 SCCLGRRLMVWDLSRIDEEQTPEDAEDGPPELLFIHGGHTSKISDFSWNPCEDWVISSVAEDN 397 (424)
Q Consensus 335 s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg 397 (424)
+ +.+| |.+|+... ..+..+..+. .+..++|.++++.++++ +.++
T Consensus 255 ~-~~~g-v~~~~~~g---------------~~~~~~~~~~-~~~~~~f~~d~~~L~it-~~~~ 298 (305)
T 3dr2_A 255 S-SGTG-VCVFDSDG---------------QLLGHIPTPG-TASNCTFDQAQQRLFIT-GGPC 298 (305)
T ss_dssp C-CSSE-EEEECTTS---------------CEEEEEECSS-CCCEEEECTTSCEEEEE-ETTE
T ss_pred e-cCCc-EEEECCCC---------------CEEEEEECCC-ceeEEEEeCCCCEEEEE-cCCe
Confidence 3 4444 99998743 3344444333 48899999988855554 4454
No 208
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=99.28 E-value=1.4e-10 Score=105.68 Aligned_cols=260 Identities=13% Similarity=0.104 Sum_probs=151.4
Q ss_pred CcEEEEEEeccCCceeEEEecCCCCcEEEEEe--CCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCceeEEEecCCCC
Q 014454 114 GKVQIIQQINHDGEVNRARYMPQNPFLIATKT--VSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKE 191 (424)
Q Consensus 114 ~~~~~~~~~~h~~~v~~~~~~p~~~~~latg~--~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~ 191 (424)
+.++.+..+. ..+..++++|+++ ++++.. .++.++||.+... ....... .. .....|-..+.++++.+++.
T Consensus 7 g~~~~v~~~~--~~p~~va~~~~g~-~~v~~~~~~~~~~~l~~~~~g-~~~~~p~-~~--~~~~~~~~~p~gv~~d~~g~ 79 (343)
T 2qe8_A 7 DRLEVVAELS--LAPGNITLTPDGR-LFLSLHQFYQPEMQVAELTQD-GLIPFPP-QS--GNAIITFDTVLGIKSDGNGI 79 (343)
T ss_dssp -CCEEEEEES--SCEEEEEECTTSC-EEEEECGGGCCSCSEEEEETT-EEEESCC-CC--SSCCCCCSCEEEEEECSSSE
T ss_pred ceeEEEEEcC--CCcceEEECCCCC-EEEEeCCCCCCceEEEEECCC-CeecCCC-cc--cCcccceeEeeEEEEcCCCc
Confidence 4566666655 7889999999986 676653 2343555555421 0000000 00 01123556799999999875
Q ss_pred ceEEEEeC-----CCcEEEEeCCCCCCCCcccceeeeecCCccEeeEEEecCCCcEEEEEe---CCCeEEEEEcCCCCCC
Q 014454 192 GHLLSGSD-----DAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVG---DDQYLLIWDLRTPSVS 263 (424)
Q Consensus 192 ~~l~s~~~-----dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~---~dg~i~i~d~~~~~~~ 263 (424)
++++-.. ++.|.+||+.+++....+........+...+..+++++++..++++.. .++.|.+||+.+++.
T Consensus 80 -L~v~D~g~~~~~~~~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~- 157 (343)
T 2qe8_A 80 -VWMLDNGNQSKSVPKLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGLA- 157 (343)
T ss_dssp -EEEEECHHHHTSCCEEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCCE-
T ss_pred -EEEEcCCCCcCCCCeEEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCCE-
Confidence 4444332 578999999876321111100000112345789999987667777766 688999999976542
Q ss_pred CCeeeeecc-----------------------------CCCeeEEEecCCCCeEEEEEeCCC-cEEEEECCCC--CC---
Q 014454 264 KPVQSVVAH-----------------------------QSEVNCLAFNPFNEWILATGSTDK-TVKLFDLRKI--ST--- 308 (424)
Q Consensus 264 ~~~~~~~~~-----------------------------~~~v~~v~~~~~~~~~l~tg~~dg-~i~iwd~~~~--~~--- 308 (424)
...+..| ...++.|+|+|+++. |+.+...+ .+..++.... ..
T Consensus 158 --~r~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~-ly~~~~~~~~l~~~~~~~~~~~~~~~ 234 (343)
T 2qe8_A 158 --ARVLQGYPGIAPEDIDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEW-LYLSPMHSTSMYRIKSADLSNLQLTD 234 (343)
T ss_dssp --EEECTTCTTTSCCSCCCEETTEECBEECTTSCEECCCCCEEEEEECTTSCE-EEEEESSCSEEEEEEHHHHTCTTCCH
T ss_pred --EEEecCCCcccccccceeECCEEEEeccCCCceeceecccceeEeccCCCE-EEEEeCCCCeEEEEEHHHhcCCCCCh
Confidence 1111110 123688999999985 45555444 5666653210 00
Q ss_pred --cce--EecCCCCCEEEEEEcCCCCcEEEEEECCCeEEEeeCCCCCcccCCCCcCCCCCeeeEEEcCCCCCcceEEeCC
Q 014454 309 --ALH--TFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPEDAEDGPPELLFIHGGHTSKISDFSWNP 384 (424)
Q Consensus 309 --~~~--~~~~h~~~v~~~~~sp~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~ 384 (424)
... ...++......++++++| .++++...++.|.+||...+.. ..+.. ..+...+.+++|.+
T Consensus 235 ~~~~~~~~~~g~~g~pdgia~d~~G-~l~va~~~~~~V~~~d~~~G~~------------~~~~~-~~~~~~p~~va~~~ 300 (343)
T 2qe8_A 235 AELGSKIERYSEKPICDGISIDKDH-NIYVGDLAHSAIGVITSADRAY------------KLLVT-DEKLSWTDSFNFGS 300 (343)
T ss_dssp HHHHTTCEEEEECCSCSCEEECTTC-CEEEEEGGGTEEEEEETTTTEE------------EEEEE-CGGGSCEEEEEECT
T ss_pred hhhhcceEecccCCCCceEEECCCC-CEEEEccCCCeEEEEECCCCCE------------EEEEE-CCceecCCeeEECC
Confidence 000 111234456789999998 4788888899999999833210 11111 12244678999999
Q ss_pred CCCcEEEEEeCCCcEE
Q 014454 385 CEDWVISSVAEDNILQ 400 (424)
Q Consensus 385 ~~~~~l~s~~~dg~i~ 400 (424)
++. ++++.+..+.+.
T Consensus 301 ~g~-l~v~~~~~~~~~ 315 (343)
T 2qe8_A 301 DGY-LYFDCNQLHHSA 315 (343)
T ss_dssp TSC-EEEEECCGGGSG
T ss_pred CCc-EEEEeCcccccc
Confidence 988 677766544443
No 209
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.28 E-value=5.3e-10 Score=98.40 Aligned_cols=183 Identities=11% Similarity=0.039 Sum_probs=132.9
Q ss_pred eEEEEeCCCcEEEEeCCCCCCCCcccceeeeecCC-ccEeeEEEecCCCcEEEEEeCCCeEEEEEcCCCCCCCCeeeeec
Q 014454 193 HLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHE-GVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVA 271 (424)
Q Consensus 193 ~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~~~~s~~~dg~i~i~d~~~~~~~~~~~~~~~ 271 (424)
+|++++.++.|.+||.++++. +..+..+. ..+.++.+.|+++ +++ +.++.|..||. +++. +..+..
T Consensus 7 ~lv~~~~~~~v~~~d~~tG~~------~w~~~~~~~~~~~~~~~~pdG~-ilv--s~~~~V~~~d~-~G~~---~W~~~~ 73 (276)
T 3no2_A 7 LLVGGSGWNKIAIINKDTKEI------VWEYPLEKGWECNSVAATKAGE-ILF--SYSKGAKMITR-DGRE---LWNIAA 73 (276)
T ss_dssp EEEECTTCSEEEEEETTTTEE------EEEEECCTTCCCCEEEECTTSC-EEE--ECBSEEEEECT-TSCE---EEEEEC
T ss_pred EEEeeCCCCEEEEEECCCCeE------EEEeCCCccCCCcCeEECCCCC-EEE--eCCCCEEEECC-CCCE---EEEEcC
Confidence 799999999999999977743 34444444 4688999999986 554 45788999998 6553 555554
Q ss_pred c-CCCeeEEEecCCCCeEEEEEeC-CCcEEEEECCCCCCcceEecC------CCCCEEEEEEcCCCCcEEEEEECCCeEE
Q 014454 272 H-QSEVNCLAFNPFNEWILATGST-DKTVKLFDLRKISTALHTFDS------HKEEVFQVGWNPKNETILASCCLGRRLM 343 (424)
Q Consensus 272 ~-~~~v~~v~~~~~~~~~l~tg~~-dg~i~iwd~~~~~~~~~~~~~------h~~~v~~~~~sp~~~~~l~s~~~dg~i~ 343 (424)
+ ...+.++.+.++|. ++++.+. ++.|..+|.. ++.+..+.. +......+++.+++. ++++...++.|.
T Consensus 74 ~~~~~~~~~~~~~dG~-~lv~~~~~~~~v~~vd~~--Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~-~lv~~~~~~~v~ 149 (276)
T 3no2_A 74 PAGCEMQTARILPDGN-ALVAWCGHPSTILEVNMK--GEVLSKTEFETGIERPHAQFRQINKNKKGN-YLVPLFATSEVR 149 (276)
T ss_dssp CTTCEEEEEEECTTSC-EEEEEESTTEEEEEECTT--SCEEEEEEECCSCSSGGGSCSCCEECTTSC-EEEEETTTTEEE
T ss_pred CCCccccccEECCCCC-EEEEecCCCCEEEEEeCC--CCEEEEEeccCCCCcccccccCceECCCCC-EEEEecCCCEEE
Confidence 3 34688999999998 5666665 7777777753 555555442 112455678889985 788888999999
Q ss_pred EeeCCCCCcccCCCCcCCCCCeeeEEEcCCCCCcceEEeCCCCCcEEEEEeCCCcEEEEecCCccC
Q 014454 344 VWDLSRIDEEQTPEDAEDGPPELLFIHGGHTSKISDFSWNPCEDWVISSVAEDNILQIWQMAENIY 409 (424)
Q Consensus 344 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~ 409 (424)
.||.. + +.+..+..+ ..+.++...+++. ++++++.++.|..+|..++.+
T Consensus 150 ~~d~~-G--------------~~~w~~~~~-~~~~~~~~~~~g~-~~v~~~~~~~v~~~d~~tG~~ 198 (276)
T 3no2_A 150 EIAPN-G--------------QLLNSVKLS-GTPFSSAFLDNGD-CLVACGDAHCFVQLNLESNRI 198 (276)
T ss_dssp EECTT-S--------------CEEEEEECS-SCCCEEEECTTSC-EEEECBTTSEEEEECTTTCCE
T ss_pred EECCC-C--------------CEEEEEECC-CCccceeEcCCCC-EEEEeCCCCeEEEEeCcCCcE
Confidence 99987 4 445555543 3467788899998 677778788899999986644
No 210
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.24 E-value=5.4e-09 Score=93.07 Aligned_cols=209 Identities=10% Similarity=0.087 Sum_probs=135.4
Q ss_pred CCCceeEEEecCCCCceEEEEeCCCcEEEEeCCCCCCCCcccceeeeecCCccEeeEEEecCCCcEEEEEeCCCeEEEEE
Q 014454 177 HSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWD 256 (424)
Q Consensus 177 h~~~v~~l~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~dg~i~i~d 256 (424)
+..-.-+..|++++..++++...++.|..||..++.. ..+ .....+.++++++++. ++++ . ++.|.+||
T Consensus 11 ~~~~~Egp~w~~~~~~l~~~d~~~~~i~~~d~~~~~~-------~~~-~~~~~~~~i~~~~dG~-l~v~-~-~~~l~~~d 79 (297)
T 3g4e_A 11 NCRCGESPVWEEVSNSLLFVDIPAKKVCRWDSFTKQV-------QRV-TMDAPVSSVALRQSGG-YVAT-I-GTKFCALN 79 (297)
T ss_dssp CCSBEEEEEEETTTTEEEEEETTTTEEEEEETTTCCE-------EEE-ECSSCEEEEEEBTTSS-EEEE-E-TTEEEEEE
T ss_pred CCccccCCeEECCCCEEEEEECCCCEEEEEECCCCcE-------EEE-eCCCceEEEEECCCCC-EEEE-E-CCeEEEEE
Confidence 3445568999997766777777889999999976521 112 2456799999999987 5433 3 57899999
Q ss_pred cCCCCCCCCeeeeec--cCCCeeEEEecCCCCeEEEEEeC---------CCcEEEEECCCCCCcceEecCCCCCEEEEEE
Q 014454 257 LRTPSVSKPVQSVVA--HQSEVNCLAFNPFNEWILATGST---------DKTVKLFDLRKISTALHTFDSHKEEVFQVGW 325 (424)
Q Consensus 257 ~~~~~~~~~~~~~~~--~~~~v~~v~~~~~~~~~l~tg~~---------dg~i~iwd~~~~~~~~~~~~~h~~~v~~~~~ 325 (424)
..++.. ..+..... ....++.++++|+|. ++++... ...-.||.+...+. +..+..+-...+.++|
T Consensus 80 ~~~g~~-~~~~~~~~~~~~~~~~di~~d~dG~-l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~-~~~~~~~~~~pngi~~ 156 (297)
T 3g4e_A 80 WKEQSA-VVLATVDNDKKNNRFNDGKVDPAGR-YFAGTMAEETAPAVLERHQGALYSLFPDHH-VKKYFDQVDISNGLDW 156 (297)
T ss_dssp TTTTEE-EEEEECCTTCSSEEEEEEEECTTSC-EEEEEEECCSBTTBCCTTCEEEEEECTTSC-EEEEEEEESBEEEEEE
T ss_pred CCCCcE-EEEEecCCCCCCCCCCCEEECCCCC-EEEecCCcccccccccCCCcEEEEEECCCC-EEEEeeccccccceEE
Confidence 987542 11111111 123478899999998 4544322 12345555543233 2223333456789999
Q ss_pred cCCCCcEEEEEECCCeEEEeeCC--CCCcccCCCCcCCCCCeeeEEEcCCCCCcceEEeCCCCCcEEEEEeCCCcEEEEe
Q 014454 326 NPKNETILASCCLGRRLMVWDLS--RIDEEQTPEDAEDGPPELLFIHGGHTSKISDFSWNPCEDWVISSVAEDNILQIWQ 403 (424)
Q Consensus 326 sp~~~~~l~s~~~dg~i~iwd~~--~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~vw~ 403 (424)
+|+++.++++.+.++.|.+|++. .+... ..+.+..+..+......++++++|. +.++...++.|.+|+
T Consensus 157 spdg~~lyv~~~~~~~i~~~~~d~~~G~~~---------~~~~~~~~~~~~~~p~g~~~d~~G~-lwva~~~~~~v~~~d 226 (297)
T 3g4e_A 157 SLDHKIFYYIDSLSYSVDAFDYDLQTGQIS---------NRRSVYKLEKEEQIPDGMCIDAEGK-LWVACYNGGRVIRLD 226 (297)
T ss_dssp CTTSCEEEEEEGGGTEEEEEEECTTTCCEE---------EEEEEEECCGGGCEEEEEEEBTTSC-EEEEEETTTEEEEEC
T ss_pred cCCCCEEEEecCCCCcEEEEeccCCCCccc---------CcEEEEECCCCCCCCCeeEECCCCC-EEEEEcCCCEEEEEc
Confidence 99998666777778999999874 22110 0122333333345678899999998 777777788899999
Q ss_pred cCCccC
Q 014454 404 MAENIY 409 (424)
Q Consensus 404 ~~~~~~ 409 (424)
..++.+
T Consensus 227 ~~tG~~ 232 (297)
T 3g4e_A 227 PVTGKR 232 (297)
T ss_dssp TTTCCE
T ss_pred CCCceE
Confidence 986643
No 211
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.24 E-value=4.6e-09 Score=95.63 Aligned_cols=251 Identities=14% Similarity=0.032 Sum_probs=152.8
Q ss_pred EEEEeccCCceeEEEecCCCCcEEEEEe---------CCCeEEEEeCCCCCCCCCCCCCCCCcEEEecC-------CCce
Q 014454 118 IIQQINHDGEVNRARYMPQNPFLIATKT---------VSAEVYVFDYSKHPSKPPLDGACSPDLRLRGH-------STEG 181 (424)
Q Consensus 118 ~~~~~~h~~~v~~~~~~p~~~~~latg~---------~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~h-------~~~v 181 (424)
++.++.-..... ++++|+++.++++.. .++.|.+||..+ .+....+.-. ....
T Consensus 71 v~~~I~vG~~P~-va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~t----------~~v~~~I~v~~g~r~~~g~~P 139 (386)
T 3sjl_D 71 VIGMIDGGFLPN-PVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVT----------LLPTADIELPDAPRFLVGTYP 139 (386)
T ss_dssp EEEEEEECSSCE-EEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTT----------CCEEEEEEETTCCCCCBSCCG
T ss_pred EEEEEECCCCCc-EEECCCCCEEEEEcccccccccCCCCCEEEEEECCC----------CeEEEEEECCCccccccCCCC
Confidence 344554333334 999999986666542 367899999987 3444444321 1246
Q ss_pred eEEEecCCCCceEEEEeC--CCcEEEEeCCCCCCCCcccceeeeecCCccEeeEEEecCCCcEEEEEeCCCeEEEEEcCC
Q 014454 182 YGLSWSKFKEGHLLSGSD--DAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRT 259 (424)
Q Consensus 182 ~~l~~~~~~~~~l~s~~~--dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~dg~i~i~d~~~ 259 (424)
..++++|+|+ +++++.. ++.|.++|+.+.+. +..+.. .+ . ....|.+...|++.+.||.+.+.++..
T Consensus 140 ~~~a~spDGk-~lyVan~~~~~~VsVID~~t~~v------v~tI~v-~g-~--~~~~P~g~~~~~~~~~DG~~~~v~~~~ 208 (386)
T 3sjl_D 140 WMTSLTPDGK-TLLFYQFSPAPAVGVVDLEGKAF------KRMLDV-PD-C--YHIFPTAPDTFFMHCRDGSLAKVAFGT 208 (386)
T ss_dssp GGEEECTTSS-EEEEEECSSSCEEEEEETTTTEE------EEEEEC-CS-E--EEEEEEETTEEEEEETTSCEEEEECCS
T ss_pred ceEEEcCCCC-EEEEEEcCCCCeEEEEECCCCcE------EEEEEC-CC-c--ceeecCCCceeEEECCCCCEEEEECCC
Confidence 6899999998 4665543 68999999987743 222321 11 1 122355555666888899999999876
Q ss_pred -CCCCCCeeeeecc----CCCee-EEEec-CCCCeEEEEEeCCCcEEEEECCCCC-CcceEec----------CCCCCEE
Q 014454 260 -PSVSKPVQSVVAH----QSEVN-CLAFN-PFNEWILATGSTDKTVKLFDLRKIS-TALHTFD----------SHKEEVF 321 (424)
Q Consensus 260 -~~~~~~~~~~~~~----~~~v~-~v~~~-~~~~~~l~tg~~dg~i~iwd~~~~~-~~~~~~~----------~h~~~v~ 321 (424)
++. ......+ ..++. ...|. ++|+ +++ .+.+|.|++.|+.... ..+..+. .......
T Consensus 209 ~g~v---~~~~~~~~~~~~~~~~~~~~~~~~dG~-~~~-vs~~g~V~v~d~~~~~~~v~~~~~~~~~~~~~~g~~p~g~q 283 (386)
T 3sjl_D 209 EGTP---EITHTEVFHPEDEFLINHPAYSQKAGR-LVW-PTYTGKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQ 283 (386)
T ss_dssp SSCC---EEEECCCCSCTTSCBCSCCEEETTTTE-EEE-EBTTSEEEEEECTTSSCEECCCEESSCHHHHHTTEEECSSS
T ss_pred CCeE---EEeecceeccccccccccceeEcCCCc-EEE-EeCCCEEEEEECCCCcceeecceeccccccccccccCCCcc
Confidence 342 1111111 12221 23554 5564 333 5568999999997632 1222221 0122344
Q ss_pred EEEEcCCCCcEEEEEEC---------CCeEEEeeCCCCCcccCCCCcCCCCCeeeEEEcCCCCCcceEEeCCCCC-cEEE
Q 014454 322 QVGWNPKNETILASCCL---------GRRLMVWDLSRIDEEQTPEDAEDGPPELLFIHGGHTSKISDFSWNPCED-WVIS 391 (424)
Q Consensus 322 ~~~~sp~~~~~l~s~~~---------dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~-~~l~ 391 (424)
.++++|++..++++... .+.|.++|+.+.+ .+..+.. ...+++++++++++ .+++
T Consensus 284 ~~a~~~~~~~lyV~~~~~~~~~hk~~~~~V~viD~~t~k--------------v~~~i~v-g~~~~~lavs~D~~~~ly~ 348 (386)
T 3sjl_D 284 QVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGE--------------RLAKFEM-GHEIDSINVSQDEKPLLYA 348 (386)
T ss_dssp CEEEETTTTEEEEEEEECCTTCTTSCEEEEEEEETTTCC--------------EEEEEEE-EEEECEEEECSSSSCEEEE
T ss_pred eeeECCCCCeEEEEeccccccccCCCCCEEEEEECCCCe--------------EEEEEEC-CCCcceEEECCCCCeEEEE
Confidence 57789988766655432 2579999998864 2332221 12578999999996 4445
Q ss_pred EEeCCCcEEEEecCCccCC
Q 014454 392 SVAEDNILQIWQMAENIYH 410 (424)
Q Consensus 392 s~~~dg~i~vw~~~~~~~~ 410 (424)
+...++.|.++|..++.+.
T Consensus 349 tn~~~~~VsViD~~t~k~~ 367 (386)
T 3sjl_D 349 LSTGDKTLYIHDAESGEEL 367 (386)
T ss_dssp EETTTTEEEEEETTTCCEE
T ss_pred EcCCCCeEEEEECCCCcEE
Confidence 5556899999999988653
No 212
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.22 E-value=4.2e-09 Score=94.34 Aligned_cols=201 Identities=10% Similarity=0.114 Sum_probs=133.5
Q ss_pred cCCceeEEEecCC-CCcEEEEEeCCCeEEEEeCCCCCCCCCCCCCCCCcEEE-e-----cCCCceeEEEecCCCCceEEE
Q 014454 124 HDGEVNRARYMPQ-NPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRL-R-----GHSTEGYGLSWSKFKEGHLLS 196 (424)
Q Consensus 124 h~~~v~~~~~~p~-~~~~latg~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~-~-----~h~~~v~~l~~~~~~~~~l~s 196 (424)
+...+.++++.++ +. ++++.. .+.|.+|+... . ...+ . .....+.++++.+++. ++++
T Consensus 69 ~~~~~~~i~~~~~~g~-l~v~~~-~~~l~~~d~~g-~-----------~~~~~~~~~~~~~~~~~~~i~~d~~g~-l~v~ 133 (314)
T 1pjx_A 69 YGGIPAGCQCDRDANQ-LFVADM-RLGLLVVQTDG-T-----------FEEIAKKDSEGRRMQGCNDCAFDYEGN-LWIT 133 (314)
T ss_dssp EECCEEEEEECSSSSE-EEEEET-TTEEEEEETTS-C-----------EEECCSBCTTSCBCBCCCEEEECTTSC-EEEE
T ss_pred CCCCCceEEEecCCCc-EEEEEC-CCCEEEEeCCC-C-----------EEEEEeccCCCccccCCcCEEECCCCC-EEEE
Confidence 3467889999998 64 555443 44788898762 1 0111 1 1123578999999886 5555
Q ss_pred EeCC---------------CcEEEEeCCCCCCCCcccceeeeecCCccEeeEEEe----cCCCcEEEEEeCCCeEEEEEc
Q 014454 197 GSDD---------------AQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWH----LRHEYLFGSVGDDQYLLIWDL 257 (424)
Q Consensus 197 ~~~d---------------g~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~----~~~~~~~~s~~~dg~i~i~d~ 257 (424)
...+ +.|..|+.. +. ...+..+......++|+ ++++.++++...++.|.+||+
T Consensus 134 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~-------~~~~~~~~~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~ 205 (314)
T 1pjx_A 134 APAGEVAPADYTRSMQEKFGSIYCFTTD-GQ-------MIQVDTAFQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDI 205 (314)
T ss_dssp ECBCBCTTSCCCBTTSSSCEEEEEECTT-SC-------EEEEEEEESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEE
T ss_pred ecCcccccccccccccCCCCeEEEECCC-CC-------EEEeccCCCCcceEEEecccCCCCCEEEEEECCCCeEEEEEC
Confidence 5544 466667654 21 11112233456889999 998777767677899999998
Q ss_pred C-CCCCC--CCeeeeeccC-CCeeEEEecCCCCeEEEEEeCCCcEEEEECCCCCCcceEecCCCCCEEEEEEcCCCCcEE
Q 014454 258 R-TPSVS--KPVQSVVAHQ-SEVNCLAFNPFNEWILATGSTDKTVKLFDLRKISTALHTFDSHKEEVFQVGWNPKNETIL 333 (424)
Q Consensus 258 ~-~~~~~--~~~~~~~~~~-~~v~~v~~~~~~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~l 333 (424)
. .+... .....+..+. ..+..++++++|. ++++...++.|.+||..+ ++.+..+..+...+.+++|+|++..++
T Consensus 206 ~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~~G~-l~v~~~~~~~i~~~d~~~-g~~~~~~~~~~~~~~~i~~~~dg~~l~ 283 (314)
T 1pjx_A 206 KGPAKIENKKVWGHIPGTHEGGADGMDFDEDNN-LLVANWGSSHIEVFGPDG-GQPKMRIRCPFEKPSNLHFKPQTKTIF 283 (314)
T ss_dssp EETTEEEEEEEEEECCCCSSCEEEEEEEBTTCC-EEEEEETTTEEEEECTTC-BSCSEEEECSSSCEEEEEECTTSSEEE
T ss_pred CCCCccccceEEEECCCCCCCCCCceEECCCCC-EEEEEcCCCEEEEEcCCC-CcEeEEEeCCCCCceeEEECCCCCEEE
Confidence 6 32210 0112222232 5678899999886 677776788999999885 456666666668899999999996566
Q ss_pred EEEECCCeEEEeeCCC
Q 014454 334 ASCCLGRRLMVWDLSR 349 (424)
Q Consensus 334 ~s~~~dg~i~iwd~~~ 349 (424)
++...++.|..|++..
T Consensus 284 v~~~~~~~l~~~~~~~ 299 (314)
T 1pjx_A 284 VTEHENNAVWKFEWQR 299 (314)
T ss_dssp EEETTTTEEEEEECSS
T ss_pred EEeCCCCeEEEEeCCC
Confidence 6666678899999875
No 213
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.22 E-value=2.6e-09 Score=99.55 Aligned_cols=198 Identities=8% Similarity=0.035 Sum_probs=132.3
Q ss_pred CceeEEEecCCCCceEEEEeCCCcEEEEeCCCCCCCCcccceeeeecCCccEeeEEEecCCCcEEEEEeCCC--eEEEEE
Q 014454 179 TEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQ--YLLIWD 256 (424)
Q Consensus 179 ~~v~~l~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~dg--~i~i~d 256 (424)
.....|+|++++. ++++...++.|++||+.++.. ..+........ ++|++++..++ ++..++ .|.+++
T Consensus 131 ~~P~~la~d~~g~-lyv~d~~~~~I~~id~~~g~~-------~~~~~~~~~~~-ia~~~~g~~l~-~~d~~~~~~I~~~d 200 (409)
T 3hrp_A 131 KYMWGIAAVGNNT-VLAYQRDDPRVRLISVDDNKV-------TTVHPGFKGGK-PAVTKDKQRVY-SIGWEGTHTVYVYM 200 (409)
T ss_dssp CCEEEEEECSTTE-EEEEETTTTEEEEEETTTTEE-------EEEEETCCBCB-CEECTTSSEEE-EEBSSTTCEEEEEE
T ss_pred CCceEEEEeCCCC-EEEEecCCCcEEEEECCCCEE-------EEeeccCCCCc-eeEecCCCcEE-EEecCCCceEEEEE
Confidence 3578999999876 677777789999999976521 11211222334 99999998665 555544 799999
Q ss_pred cCCCCCCCCeeee---ec-cCCCeeEEEecCCCCeEEEEEeCCCcEEEEECCCCCCcceEe-----cCCCCCE--EEEEE
Q 014454 257 LRTPSVSKPVQSV---VA-HQSEVNCLAFNPFNEWILATGSTDKTVKLFDLRKISTALHTF-----DSHKEEV--FQVGW 325 (424)
Q Consensus 257 ~~~~~~~~~~~~~---~~-~~~~v~~v~~~~~~~~~l~tg~~dg~i~iwd~~~~~~~~~~~-----~~h~~~v--~~~~~ 325 (424)
...... ...+ .. ....+.+++++|++..+++ +..++.|+.||.... . ...+ .++...- ..++|
T Consensus 201 ~~~~~~---~~~~g~~~~~~~~~p~~iav~p~~g~lyv-~d~~~~I~~~d~~~~-~-~~~~~~~~~~g~~~~~P~~~ia~ 274 (409)
T 3hrp_A 201 KASGWA---PTRIGQLGSTFSGKIGAVALDETEEWLYF-VDSNKNFGRFNVKTQ-E-VTLIKQLELSGSLGTNPGPYLIY 274 (409)
T ss_dssp GGGTTC---EEEEEECCTTSCSCCCBCEECTTSSEEEE-ECTTCEEEEEETTTC-C-EEEEEECCCCSCCCCSSCCEEEE
T ss_pred cCCCce---eEEeeeccchhcCCcEEEEEeCCCCeEEE-EECCCcEEEEECCCC-C-EEEEecccccCCCCCCccccEEE
Confidence 876542 2222 12 4566789999996555555 667889999999863 2 2222 1222222 39999
Q ss_pred cCCCCcEEEEEECCCeEEEeeCCCCCcccCCCCcCCCCCeeeEEEcCC---------------CCCcceEEeCCCCCcEE
Q 014454 326 NPKNETILASCCLGRRLMVWDLSRIDEEQTPEDAEDGPPELLFIHGGH---------------TSKISDFSWNPCEDWVI 390 (424)
Q Consensus 326 sp~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h---------------~~~v~~~~~~~~~~~~l 390 (424)
+|++..++++....+.|+.|+.... +..+.++ -.....+++++++. ++
T Consensus 275 ~p~~g~lyv~d~~~~~I~~~~~~g~----------------~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~-ly 337 (409)
T 3hrp_A 275 YFVDSNFYMSDQNLSSVYKITPDGE----------------CEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGN-FY 337 (409)
T ss_dssp ETTTTEEEEEETTTTEEEEECTTCC----------------EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCC-EE
T ss_pred eCCCCEEEEEeCCCCEEEEEecCCC----------------EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCC-EE
Confidence 9965567777778899999987642 1111111 23468899999999 78
Q ss_pred EEEe-CCCcEEEEecCCccC
Q 014454 391 SSVA-EDNILQIWQMAENIY 409 (424)
Q Consensus 391 ~s~~-~dg~i~vw~~~~~~~ 409 (424)
++-. .++.|+.|++.++.+
T Consensus 338 vad~~~~~~I~~~~~~~G~v 357 (409)
T 3hrp_A 338 IVDGFKGYCLRKLDILDGYV 357 (409)
T ss_dssp EEETTTTCEEEEEETTTTEE
T ss_pred EEeCCCCCEEEEEECCCCEE
Confidence 8877 889999999766643
No 214
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.20 E-value=5.3e-09 Score=96.88 Aligned_cols=256 Identities=12% Similarity=0.025 Sum_probs=156.3
Q ss_pred EEEEEeccCCceeEEEecCCCCcEEEEEe---------CCCeEEEEeCCCCCCCCCCCCCCCCcEEEecC-------CCc
Q 014454 117 QIIQQINHDGEVNRARYMPQNPFLIATKT---------VSAEVYVFDYSKHPSKPPLDGACSPDLRLRGH-------STE 180 (424)
Q Consensus 117 ~~~~~~~h~~~v~~~~~~p~~~~~latg~---------~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~h-------~~~ 180 (424)
+++.++.-.... .++++|+++.++++.. .++.|.++|..+ .+....+.-. ...
T Consensus 110 ~vv~~I~vG~~P-gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t----------~~vv~~I~v~g~~r~~~g~~ 178 (426)
T 3c75_H 110 RILGMTDGGFLP-HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVT----------FLPIADIELPDAPRFLVGTY 178 (426)
T ss_dssp EEEEEEEECSSC-EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTT----------CCEEEEEEETTCCCCCBSCC
T ss_pred EEEEEEECCCCC-ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCC----------CcEEEEEECCCccccccCCC
Confidence 344455433334 8999999986666542 467899999987 3444444311 234
Q ss_pred eeEEEecCCCCceEEEEeC--CCcEEEEeCCCCCCCCcccceeeeecCCccEeeEEEecCCCcEEEEEeCCCeEEEEEcC
Q 014454 181 GYGLSWSKFKEGHLLSGSD--DAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLR 258 (424)
Q Consensus 181 v~~l~~~~~~~~~l~s~~~--dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~dg~i~i~d~~ 258 (424)
...+.++|+++ +|+++.. ++.|.+.|+.+.+. +..+.. .. +....|.+...+++.+.||.+.+.++.
T Consensus 179 P~~~~~spDGk-~lyV~n~~~~~~VsVID~~t~kv------v~~I~v-~g---~~~~~p~g~~~~v~~~~dG~~~~V~~~ 247 (426)
T 3c75_H 179 QWMNALTPDNK-NLLFYQFSPAPAVGVVDLEGKTF------DRMLDV-PD---CYHIFPASPTVFYMNCRDGSLARVDFA 247 (426)
T ss_dssp GGGSEECTTSS-EEEEEECSSSCEEEEEETTTTEE------EEEEEC-CS---EEEEEEEETTEEEEEETTSSEEEEECC
T ss_pred cceEEEcCCCC-EEEEEecCCCCeEEEEECCCCeE------EEEEEc-CC---ceeeccCCCcEEEEEcCCCCEEEEECC
Confidence 56899999998 5666553 68899999987643 222221 11 133455555677788889999988885
Q ss_pred CCCCCCCe-eeeeccCCCe-eEEEecCCCCeEEEEEeCCCcEEEEECCCCCC-cceEecC----------CCCCEEEEEE
Q 014454 259 TPSVSKPV-QSVVAHQSEV-NCLAFNPFNEWILATGSTDKTVKLFDLRKIST-ALHTFDS----------HKEEVFQVGW 325 (424)
Q Consensus 259 ~~~~~~~~-~~~~~~~~~v-~~v~~~~~~~~~l~tg~~dg~i~iwd~~~~~~-~~~~~~~----------h~~~v~~~~~ 325 (424)
+++..... ..+.....++ ..+.+.+++..+++ ....+.|.+.|+..... .+..+.. .......+++
T Consensus 248 ~~~v~~~~~~~~~v~~~p~~~~~~~~~dg~~~~~-~s~~g~V~ViD~~~~~~~v~~~~~~~~~~~i~~g~~p~g~~~va~ 326 (426)
T 3c75_H 248 DGETKVTNTEVFHTEDELLINHPAFSLRSGRLVW-PTYTGKIFQADLTAEGATFRAPIEALTEAERADDWRPGGWQQTAY 326 (426)
T ss_dssp TTCCEEEECCCCSCTTSCBCSCCEECTTTCEEEE-EBTTSEEEEEEECSSCEEECCCEESSCTTTGGGTEEECSSSCEEE
T ss_pred CCcEEEEeeeeeccCCCceeeEeeecCCCCEEEE-EeCCCcEEEEeccCCceEEeeeeeeccccccccccccCCceeeEE
Confidence 54421000 0111111221 23567888886444 45688999999865221 1111110 0112223789
Q ss_pred cCCCCcEEEEEEC---------CCeEEEeeCCCCCcccCCCCcCCCCCeeeEEEcCCCCCcceEEeCCCCCcEEEEEe-C
Q 014454 326 NPKNETILASCCL---------GRRLMVWDLSRIDEEQTPEDAEDGPPELLFIHGGHTSKISDFSWNPCEDWVISSVA-E 395 (424)
Q Consensus 326 sp~~~~~l~s~~~---------dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~-~ 395 (424)
+|++..++++... ++.|.++|+.+.+ .+..+... ....++.|+|+++.+++++. .
T Consensus 327 s~dg~rlyVa~~~~~~gthk~~s~~VsVID~~T~k--------------vv~~I~vg-~~P~gia~spDg~~~lyv~n~~ 391 (426)
T 3c75_H 327 HRQSDRIYLLVDQRDEWKHKAASRFVVVLNAETGE--------------RINKIELG-HEIDSINVSQDAEPLLYALSAG 391 (426)
T ss_dssp EGGGTEEEEEEEECCTTCTTSCEEEEEEEETTTCC--------------EEEEEEEE-EEECEEEECCSSSCEEEEEETT
T ss_pred cCCCCEEEEEecccccccccCCCCEEEEEECCCCe--------------EEEEEECC-CCcCeEEEccCCCEEEEEEcCC
Confidence 9998766665432 3579999998863 33333211 14789999999984455555 6
Q ss_pred CCcEEEEecCCccCC
Q 014454 396 DNILQIWQMAENIYH 410 (424)
Q Consensus 396 dg~i~vw~~~~~~~~ 410 (424)
++.|.|+|+.+..+.
T Consensus 392 s~~VsVID~~t~kvv 406 (426)
T 3c75_H 392 TQTLHIYDAATGEEL 406 (426)
T ss_dssp TTEEEEEETTTCCEE
T ss_pred CCeEEEEECCCCCEE
Confidence 999999999988654
No 215
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.19 E-value=1.6e-09 Score=109.24 Aligned_cols=203 Identities=11% Similarity=0.075 Sum_probs=124.5
Q ss_pred CCCceeEEEecCCCCceEEEEeC-CC----cEEEEeCCCCCCCCcccceeeeecCCccEeeEEEecCCCcEEEEEeCCC-
Q 014454 177 HSTEGYGLSWSKFKEGHLLSGSD-DA----QICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQ- 250 (424)
Q Consensus 177 h~~~v~~l~~~~~~~~~l~s~~~-dg----~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~dg- 250 (424)
|...+.+++|||+|+ +|+.++. +| .|++||+.++.. +.. ..+...+..++|+|+ +.++.+ +.++
T Consensus 161 ~~~~~~~~~~SPDG~-~la~~~~~~G~e~~~i~v~dl~tg~~------~~~-~~~~~~~~~~~wspD-~~l~~~-~~~~~ 230 (741)
T 1yr2_A 161 GATALDAWAASDDGR-LLAYSVQDGGSDWRTVKFVGVADGKP------LAD-ELKWVKFSGLAWLGN-DALLYS-RFAEP 230 (741)
T ss_dssp --EEEEEEEECTTSS-EEEEEEEETTCSEEEEEEEETTTCCE------EEE-EEEEEESCCCEESTT-SEEEEE-ECCCC
T ss_pred CCEEEEeEEECCCCC-EEEEEEcCCCCceEEEEEEECCCCCC------CCc-cCCCceeccEEEECC-CEEEEE-EecCc
Confidence 334678999999998 4655443 34 599999987743 111 112223468999999 766644 4443
Q ss_pred -------------eEEEEEcCCCCCCCCeeeee--ccCCCeeEEEecCCCCeEEEEEeC----CCcEEEEECCCCCCc-c
Q 014454 251 -------------YLLIWDLRTPSVSKPVQSVV--AHQSEVNCLAFNPFNEWILATGST----DKTVKLFDLRKISTA-L 310 (424)
Q Consensus 251 -------------~i~i~d~~~~~~~~~~~~~~--~~~~~v~~v~~~~~~~~~l~tg~~----dg~i~iwd~~~~~~~-~ 310 (424)
.|++|++.++.. .....+. .+...+..+.|+|+|+++++++.. ...|++||+.+.... .
T Consensus 231 ~~~~~~~~~~~~~~v~~~~lgt~~~-~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~ 309 (741)
T 1yr2_A 231 KEGQAFQALNYNQTVWLHRLGTPQS-ADQPVFATPELPKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPV 309 (741)
T ss_dssp --------CCCCCEEEEEETTSCGG-GCEEEECCTTCTTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCC
T ss_pred ccccccccCCCCCEEEEEECCCCch-hCEEEeccCCCCeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCCccc
Confidence 388999876542 1122222 233358899999999965555442 348999999863112 4
Q ss_pred eEecCCCCCEEEEEEcCCCCcEEEEEEC---CCeEEEeeCCCCCcccCCCCcCCCCCeeeEEEcCCCCCcceEEeCCCCC
Q 014454 311 HTFDSHKEEVFQVGWNPKNETILASCCL---GRRLMVWDLSRIDEEQTPEDAEDGPPELLFIHGGHTSKISDFSWNPCED 387 (424)
Q Consensus 311 ~~~~~h~~~v~~~~~sp~~~~~l~s~~~---dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~ 387 (424)
..+..+...+.... +|+++.+++.... .+.|.+||+.... .........+...+.+++|. +.
T Consensus 310 ~~l~~~~~~~~~~~-~~dg~~l~~~s~~~~~~~~l~~~d~~~~~------------~~~~~l~~~~~~~l~~~~~~--~~ 374 (741)
T 1yr2_A 310 TALIPDLKAQWDFV-DGVGDQLWFVSGDGAPLKKIVRVDLSGST------------PRFDTVVPESKDNLESVGIA--GN 374 (741)
T ss_dssp EEEECSSSSCEEEE-EEETTEEEEEECTTCTTCEEEEEECSSSS------------CEEEEEECCCSSEEEEEEEE--BT
T ss_pred EEecCCCCceEEEE-eccCCEEEEEECCCCCCCEEEEEeCCCCc------------cccEEEecCCCCeEEEEEEE--CC
Confidence 55555555555554 4888754444432 3459999987531 02222234444456677777 44
Q ss_pred cEEEEEeCCCcEEEEecC
Q 014454 388 WVISSVAEDNILQIWQMA 405 (424)
Q Consensus 388 ~~l~s~~~dg~i~vw~~~ 405 (424)
.++++...|+..+||.+.
T Consensus 375 ~lv~~~~~dg~~~l~~~~ 392 (741)
T 1yr2_A 375 RLFASYIHDAKSQVLAFD 392 (741)
T ss_dssp EEEEEEEETTEEEEEEEE
T ss_pred EEEEEEEECCEEEEEEEe
Confidence 488898999988887654
No 216
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=99.18 E-value=1.8e-09 Score=108.03 Aligned_cols=208 Identities=13% Similarity=0.119 Sum_probs=133.7
Q ss_pred CCCceeEEEecCCCCceEEEEeC----CCcEEEEeCCCCCCCCcccceeeeecCCccEeeEEEecCCCcEEEEEeCC---
Q 014454 177 HSTEGYGLSWSKFKEGHLLSGSD----DAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDD--- 249 (424)
Q Consensus 177 h~~~v~~l~~~~~~~~~l~s~~~----dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~d--- 249 (424)
|...+.+++|||+++.++++.+. ...|++||+.++.. +.. .........++|+ +++.++ .++.+
T Consensus 127 ~~~~l~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~------~~~-~~~~~k~~~~~Ws-Dg~~l~-y~~~~~~~ 197 (693)
T 3iuj_A 127 GTTALDQLSFSRDGRILAYSLSLAGSDWREIHLMDVESKQP------LET-PLKDVKFSGISWL-GNEGFF-YSSYDKPD 197 (693)
T ss_dssp SCCEEEEEEECTTSSEEEEEEECSSCCEEEEEEEETTTCSE------EEE-EEEEEESCCCEEE-TTTEEE-EEESSCCC
T ss_pred CcEEEEEEEECCCCCEEEEEEecCCCceEEEEEEECCCCCC------Ccc-ccCCceeccEEEe-CCCEEE-EEEecCcc
Confidence 45578889999999843333333 35699999988742 111 1111123678999 988776 44444
Q ss_pred ----------CeEEEEEcCCCCCC-CCeeeeec-cCCCeeEEEecCCCCeEEEEEeCC---CcEEEEECCCCCCcceEec
Q 014454 250 ----------QYLLIWDLRTPSVS-KPVQSVVA-HQSEVNCLAFNPFNEWILATGSTD---KTVKLFDLRKISTALHTFD 314 (424)
Q Consensus 250 ----------g~i~i~d~~~~~~~-~~~~~~~~-~~~~v~~v~~~~~~~~~l~tg~~d---g~i~iwd~~~~~~~~~~~~ 314 (424)
..|++|++.++... ..+..... +......+.|+|++++++++.+.+ ..|+++|+.+.......+.
T Consensus 198 ~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~~l~ 277 (693)
T 3iuj_A 198 GSELSARTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENAPLLTVQ 277 (693)
T ss_dssp -------CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTCCCEEEE
T ss_pred cccccccCCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCCceEEEe
Confidence 34999998875421 11222223 445678899999999876666533 5899999987544566666
Q ss_pred CCCCCEEEEEEcCCCCcEEEEEECC---CeEEEeeCCCCCcccCCCCcCCCCCeeeEEEcCCCCCcceEEeCCCCCcEEE
Q 014454 315 SHKEEVFQVGWNPKNETILASCCLG---RRLMVWDLSRIDEEQTPEDAEDGPPELLFIHGGHTSKISDFSWNPCEDWVIS 391 (424)
Q Consensus 315 ~h~~~v~~~~~sp~~~~~l~s~~~d---g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~ 391 (424)
.+....... |++++..+++.+..+ +.|..+++..... .-...+..|...+. .|++++.++++
T Consensus 278 ~~~~~~~~~-~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~------------~~~~~l~~~~~~~~--~~s~~g~~lv~ 342 (693)
T 3iuj_A 278 GDLDADVSL-VDNKGSTLYLLTNRDAPNRRLVTVDAANPGP------------AHWRDLIPERQQVL--TVHSGSGYLFA 342 (693)
T ss_dssp CSSSSCEEE-EEEETTEEEEEECTTCTTCEEEEEETTSCCG------------GGCEEEECCCSSCE--EEEEETTEEEE
T ss_pred CCCCceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCCc------------cccEEEecCCCCEE--EEEEECCEEEE
Confidence 666666555 677777677666654 5788999876432 11223344544454 88899987766
Q ss_pred EEeCCC--cEEEEecCCcc
Q 014454 392 SVAEDN--ILQIWQMAENI 408 (424)
Q Consensus 392 s~~~dg--~i~vw~~~~~~ 408 (424)
+...++ .|++|++..+.
T Consensus 343 ~~~~~g~~~l~~~d~~g~~ 361 (693)
T 3iuj_A 343 EYMVDATARVEQFDYEGKR 361 (693)
T ss_dssp EEEETTEEEEEEECTTSCE
T ss_pred EEEECCeeEEEEEECCCCe
Confidence 766666 68888887553
No 217
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=99.13 E-value=9.6e-08 Score=87.68 Aligned_cols=232 Identities=15% Similarity=0.089 Sum_probs=143.7
Q ss_pred Eec--CCCCcEEEEEeCCCeEEEEeCCCCCCCCCCCCCCCCcEEEe------c-CCCceeEEEecCCCCceEEEEeCC--
Q 014454 132 RYM--PQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLR------G-HSTEGYGLSWSKFKEGHLLSGSDD-- 200 (424)
Q Consensus 132 ~~~--p~~~~~latg~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~------~-h~~~v~~l~~~~~~~~~l~s~~~d-- 200 (424)
.++ ++++.+++.|..++.|+|+|+.+.+..+ +....+. . .......+...|++ +++++..+
T Consensus 88 ~~~~~~~r~~l~v~~l~s~~I~viD~~t~p~~p------~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG--i~Vs~~g~~~ 159 (462)
T 2ece_A 88 NGKPNIERRFLIVPGLRSSRIYIIDTKPNPREP------KIIKVIEPEEVKKVSGYSRLHTVHCGPDA--IYISALGNEE 159 (462)
T ss_dssp TCCTTCCSCEEEEEBTTTCCEEEEECCSCTTSC------EEEEEECHHHHHHHHCEEEEEEEEECSSC--EEEEEEEETT
T ss_pred ccCCCccCCEEEEccCCCCeEEEEECCCCCCCc------eeeeeechhhcccccCCCcccceeECCCe--EEEEcCCCcC
Confidence 336 7888899999999999999997633222 2222331 0 11234567778887 56666555
Q ss_pred ----CcEEEEeCCCCCCCCcccceeeeec--CC-ccEeeEEEecCCCcEEEEEe-------------------CCCeEEE
Q 014454 201 ----AQICLWDINAAPKNKSLEAMQIFKV--HE-GVVEDVAWHLRHEYLFGSVG-------------------DDQYLLI 254 (424)
Q Consensus 201 ----g~i~iwd~~~~~~~~~~~~~~~~~~--~~-~~v~~~~~~~~~~~~~~s~~-------------------~dg~i~i 254 (424)
|.|.++|..+.+.. ..+.. .. ..-.++.|+|+++.++ +.. ....|.+
T Consensus 160 g~~~g~v~vlD~~T~~v~------~~~~~~~~~~~~~Yd~~~~p~~~~mv-sS~wg~p~~~~~g~~~~~~~~~~~d~V~v 232 (462)
T 2ece_A 160 GEGPGGILMLDHYSFEPL------GKWEIDRGDQYLAYDFWWNLPNEVLV-SSEWAVPNTIEDGLKLEHLKDRYGNRIHF 232 (462)
T ss_dssp SCSCCEEEEECTTTCCEE------EECCSBCTTCCCCCCEEEETTTTEEE-ECBCCCHHHHTTCCCTTTHHHHSCCEEEE
T ss_pred CCCCCeEEEEECCCCeEE------EEEccCCCCccccceEEECCCCCEEE-EccCcCccccccccchhhhhhccCCEEEE
Confidence 78999999876432 22321 11 2245688999998554 442 3789999
Q ss_pred EEcCCCCCCCCeeeeecc--CCCeeEE--EecCCCCeEEEEEe-----CCCcEEEEECCCCCC--cceEe--cC------
Q 014454 255 WDLRTPSVSKPVQSVVAH--QSEVNCL--AFNPFNEWILATGS-----TDKTVKLFDLRKIST--ALHTF--DS------ 315 (424)
Q Consensus 255 ~d~~~~~~~~~~~~~~~~--~~~v~~v--~~~~~~~~~l~tg~-----~dg~i~iwd~~~~~~--~~~~~--~~------ 315 (424)
||+.+++. +.++... ......| +|+|++++.++++- .+++|.+|.... +. ..+.+ ..
T Consensus 233 ~D~~~~k~---~~tI~vg~~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~-g~~~~~~vIdi~~~~v~~~ 308 (462)
T 2ece_A 233 WDLRKRKR---IHSLTLGEENRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYED-GKWNAEKVIEIPAEPLEGN 308 (462)
T ss_dssp EETTTTEE---EEEEESCTTEEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEET-TEEEEEEEEEECCEECCSS
T ss_pred EECCCCcE---eeEEecCCCCCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecC-CceeEEEEEeCCCcccccc
Confidence 99987542 4444332 1233444 45999997777776 778887765543 21 00110 00
Q ss_pred ----------CCCCEEEEEEcCCCCcEEEEEECCCeEEEeeCCCCCcccCCCCcCCCCCeeeEEEcCC------------
Q 014454 316 ----------HKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPEDAEDGPPELLFIHGGH------------ 373 (424)
Q Consensus 316 ----------h~~~v~~~~~sp~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h------------ 373 (424)
-......|.+||+++.++++.-..+.|.+||+..... ..++....-.
T Consensus 309 lp~~~~~f~~~~~~pa~I~lS~DGrfLYVSnrg~d~VavfdV~d~~~-----------~~lv~~I~tGG~~~~~~~~~G~ 377 (462)
T 2ece_A 309 LPEILKPFKAVPPLVTDIDISLDDKFLYLSLWGIGEVRQYDISNPFK-----------PVLTGKVKLGGIFHRADHPAGH 377 (462)
T ss_dssp CCGGGGGGTEECCCCCCEEECTTSCEEEEEETTTTEEEEEECSSTTS-----------CEEEEEEECBTTTTCBCCTTSC
T ss_pred ccccccccccCCCceeEEEECCCCCEEEEEeCCCCEEEEEEecCCCC-----------cEEEEEEEeCCeeccccccccc
Confidence 0245788999999987777777789999999964321 1333222211
Q ss_pred --CCCcceEEeCCCCCcEEEEE
Q 014454 374 --TSKISDFSWNPCEDWVISSV 393 (424)
Q Consensus 374 --~~~v~~~~~~~~~~~~l~s~ 393 (424)
...-..++++|+|++++++.
T Consensus 378 ~~~ggPr~~~lSpDGk~LyVaN 399 (462)
T 2ece_A 378 KLTGAPQMLEISRDGRRVYVTN 399 (462)
T ss_dssp CCCSCCCCEEECTTSSEEEEEC
T ss_pred cCCCCCCEEEEcCCCCEEEEEc
Confidence 01357899999999655554
No 218
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=99.13 E-value=3.5e-09 Score=96.45 Aligned_cols=232 Identities=8% Similarity=-0.114 Sum_probs=136.0
Q ss_pred EEEEEeCCC----eEEEEeCCCCCCCCCCCCCCCCcEEEecCCCceeEEEecCCCCceEEEEe----------CCCcEEE
Q 014454 140 LIATKTVSA----EVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGS----------DDAQICL 205 (424)
Q Consensus 140 ~latg~~dg----~v~iw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~----------~dg~i~i 205 (424)
++++-..++ +|.++|..+ .+.+.++.....+ .+.++|++.. ++++. .++.|.+
T Consensus 34 ~yV~~~~~~~~~d~vsvID~~t----------~~v~~~i~vG~~P--~i~~spDg~~-lyVan~~~~r~~~G~~~~~Vsv 100 (368)
T 1mda_H 34 SHITLPAYFAGTTENWVSCAGC----------GVTLGHSLGAFLS--LAVAGHSGSD-FALASTSFARSAKGKRTDYVEV 100 (368)
T ss_dssp EEEEECTTTCSSEEEEEEETTT----------TEEEEEEEECTTC--EEEECTTSSC-EEEEEEEETTTTSSSEEEEEEE
T ss_pred EEEECCccCCccceEEEEECCC----------CeEEEEEeCCCCC--ceEECCCCCE-EEEEcccccccccCCCCCEEEE
Confidence 455544444 888999887 4555666544444 7999999984 55554 3789999
Q ss_pred EeCCCCCCCCcccceeeeecC-------CccEeeEEEecCCCcEEEEEeC-CCeEEE--EEcCCCCCCCCeee------e
Q 014454 206 WDINAAPKNKSLEAMQIFKVH-------EGVVEDVAWHLRHEYLFGSVGD-DQYLLI--WDLRTPSVSKPVQS------V 269 (424)
Q Consensus 206 wd~~~~~~~~~~~~~~~~~~~-------~~~v~~~~~~~~~~~~~~s~~~-dg~i~i--~d~~~~~~~~~~~~------~ 269 (424)
||+.+.+.. ..+... ......++++|+++.++++... +..+.+ +|+.+- ..+.. .
T Consensus 101 iD~~T~~vv------~~I~v~~~~~~~~g~~P~~ia~SpDGk~lyVan~~~~~~v~V~~iD~~tv---~~i~v~~~~~~~ 171 (368)
T 1mda_H 101 FDPVTFLPI------ADIELPDAPRFSVGPRVHIIGNCASSACLLFFLFGSSAAAGLSVPGASDD---QLTKSASCFHIH 171 (368)
T ss_dssp ECTTTCCEE------EEEEETTSCSCCBSCCTTSEEECTTSSCEEEEECSSSCEEEEEETTTEEE---EEEECSSCCCCE
T ss_pred EECCCCCEE------EEEECCCccccccCCCcceEEEcCCCCEEEEEccCCCCeEEEEEEchhhc---eEEECCCceEEc
Confidence 999887432 333211 1245689999999988865533 467888 888650 00100 0
Q ss_pred ec---------cCCCeeEEEe--------------------------cCCCCeEEEEEeCCCcEEEEECCCCC-CcceEe
Q 014454 270 VA---------HQSEVNCLAF--------------------------NPFNEWILATGSTDKTVKLFDLRKIS-TALHTF 313 (424)
Q Consensus 270 ~~---------~~~~v~~v~~--------------------------~~~~~~~l~tg~~dg~i~iwd~~~~~-~~~~~~ 313 (424)
.. ..+.+..+.. .+++..++ ..+. +.|.+.|+.... ..+..+
T Consensus 172 p~g~~~~~~~~~dg~~~~vd~~~~~~~~~~v~~~~t~~i~vg~~P~~~~~~~~~~-~vs~-~~V~viD~~~~~~~v~~~~ 249 (368)
T 1mda_H 172 PGAAATHYLGSCPASLAASDLAAAPAAAGIVGAQCTGAQNCSSQAAQANYPGMLV-WAVA-SSILQGDIPAAGATMKAAI 249 (368)
T ss_dssp EEETTEEECCCCTTSCEEEECCSSCCCCEECCCCSCTTSCBCSCCEEETTTTEEE-ECBS-SCCEEEECCSSCCEEECCC
T ss_pred cCCCeEEEEEcCCCCEEEEECccccccCCeEEEEeeeeeeCCCCccccccCCEEE-EEcC-CEEEEEECCCCcceEEEEE
Confidence 00 0001111111 22233222 2223 667777765311 111111
Q ss_pred cC-------C---CCCEEEEEEcCCCCcEEEEEE-C-------CCeEEEeeCCCCCcccCCCCcCCCCCeeeEEEcCCCC
Q 014454 314 DS-------H---KEEVFQVGWNPKNETILASCC-L-------GRRLMVWDLSRIDEEQTPEDAEDGPPELLFIHGGHTS 375 (424)
Q Consensus 314 ~~-------h---~~~v~~~~~sp~~~~~l~s~~-~-------dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~ 375 (424)
.. + ......++++|+++.++++.. . ++.+.++|+.+.+.. ..+....
T Consensus 250 ~~~~~~~~~~~~~p~g~~~v~~s~dg~~lyV~~~~~~~~~~~~~~~~~ViD~~t~~vv--------------~~i~vg~- 314 (368)
T 1mda_H 250 DGNESGRKADNFRSAGFQMVAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASVGQTS--------------GPISNGH- 314 (368)
T ss_dssp CSSCTHHHHTTEEECSSSCEEEETTTTEEEEEEEECSSCTTSCEEEEEEEESSSCCEE--------------ECCEEEE-
T ss_pred EeccccccccccccCcceeeEEcCCCCEEEEEeccccCcccccCCCEEEEECCCCeEE--------------EEEECCC-
Confidence 11 0 011122789999987666544 2 235669999886432 2221111
Q ss_pred CcceEEeCCCCCcEEEEEe-CCCcEEEEecCCccCC
Q 014454 376 KISDFSWNPCEDWVISSVA-EDNILQIWQMAENIYH 410 (424)
Q Consensus 376 ~v~~~~~~~~~~~~l~s~~-~dg~i~vw~~~~~~~~ 410 (424)
....++|+|++++++++.. .++.|.|+|+.+..+.
T Consensus 315 ~p~gi~~s~Dg~~l~va~~~~~~~VsVID~~t~kvv 350 (368)
T 1mda_H 315 DSDAIIAAQDGASDNYANSAGTEVLDIYDAASDQDQ 350 (368)
T ss_dssp EECEEEECCSSSCEEEEEETTTTEEEEEESSSCEEE
T ss_pred CcceEEECCCCCEEEEEccCCCCeEEEEECCCCcEE
Confidence 4789999999987888888 6999999999988654
No 219
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.13 E-value=5.8e-08 Score=87.63 Aligned_cols=197 Identities=10% Similarity=0.020 Sum_probs=127.2
Q ss_pred eeEEEecCCCCceEEEEeCCCcEEEEeCCCCCCCCcccceeeeecCCccEeeEEEecCCCcEEEEEeCCCeEEEEEcCCC
Q 014454 181 GYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTP 260 (424)
Q Consensus 181 v~~l~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~dg~i~i~d~~~~ 260 (424)
..+..|+|++..++++...++.|..||..++.. ..+. ....+.+++|++++. ++++ +. ..|.+||..++
T Consensus 51 ~egp~~~~~~~~l~~~d~~~~~i~~~d~~~~~~-------~~~~-~~~~v~~i~~~~dg~-l~v~-~~-~gl~~~d~~~g 119 (326)
T 2ghs_A 51 GEGPTFDPASGTAWWFNILERELHELHLASGRK-------TVHA-LPFMGSALAKISDSK-QLIA-SD-DGLFLRDTATG 119 (326)
T ss_dssp EEEEEEETTTTEEEEEEGGGTEEEEEETTTTEE-------EEEE-CSSCEEEEEEEETTE-EEEE-ET-TEEEEEETTTC
T ss_pred CcCCeEeCCCCEEEEEECCCCEEEEEECCCCcE-------EEEE-CCCcceEEEEeCCCe-EEEE-EC-CCEEEEECCCC
Confidence 467889998766777777889999999876421 1122 346799999999986 4433 34 45999998776
Q ss_pred CCCCCeeeeecc-----CCCeeEEEecCCCCeEEEEEeC------CCcEEEEECCCCCCcceEecCCCCCEEEEEEcCCC
Q 014454 261 SVSKPVQSVVAH-----QSEVNCLAFNPFNEWILATGST------DKTVKLFDLRKISTALHTFDSHKEEVFQVGWNPKN 329 (424)
Q Consensus 261 ~~~~~~~~~~~~-----~~~v~~v~~~~~~~~~l~tg~~------dg~i~iwd~~~~~~~~~~~~~h~~~v~~~~~sp~~ 329 (424)
.. ..+... ...++.++++|+|. ++++... .+.|..+| . ++. ..+..+......++|+|++
T Consensus 120 ~~----~~~~~~~~~~~~~~~~~i~~d~~G~-l~v~~~~~~~~~~~~~l~~~~--~-g~~-~~~~~~~~~~~~i~~s~dg 190 (326)
T 2ghs_A 120 VL----TLHAELESDLPGNRSNDGRMHPSGA-LWIGTMGRKAETGAGSIYHVA--K-GKV-TKLFADISIPNSICFSPDG 190 (326)
T ss_dssp CE----EEEECSSTTCTTEEEEEEEECTTSC-EEEEEEETTCCTTCEEEEEEE--T-TEE-EEEEEEESSEEEEEECTTS
T ss_pred cE----EEEeeCCCCCCCCCCCCEEECCCCC-EEEEeCCCcCCCCceEEEEEe--C-CcE-EEeeCCCcccCCeEEcCCC
Confidence 52 222111 23588999999998 4444332 24566666 3 332 2232233457899999999
Q ss_pred CcEEEEEECCCeEEEeeCC--CC-CcccCCCCcCCCCCeeeEEEcCCCCCcceEEeCCCCCcEEEEEeCCCcEEEEecCC
Q 014454 330 ETILASCCLGRRLMVWDLS--RI-DEEQTPEDAEDGPPELLFIHGGHTSKISDFSWNPCEDWVISSVAEDNILQIWQMAE 406 (424)
Q Consensus 330 ~~~l~s~~~dg~i~iwd~~--~~-~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~vw~~~~ 406 (424)
+.++++.+.++.|.+|++. .+ .. . ....+..+.........++++++|. +.++...++.|.+|+...
T Consensus 191 ~~lyv~~~~~~~I~~~d~~~~~Gl~~-~--------~~~~~~~~~~~~~~p~gi~~d~~G~-lwva~~~~~~v~~~d~~g 260 (326)
T 2ghs_A 191 TTGYFVDTKVNRLMRVPLDARTGLPT-G--------KAEVFIDSTGIKGGMDGSVCDAEGH-IWNARWGEGAVDRYDTDG 260 (326)
T ss_dssp CEEEEEETTTCEEEEEEBCTTTCCBS-S--------CCEEEEECTTSSSEEEEEEECTTSC-EEEEEETTTEEEEECTTC
T ss_pred CEEEEEECCCCEEEEEEcccccCCcc-c--------CceEEEECCCCCCCCCeeEECCCCC-EEEEEeCCCEEEEECCCC
Confidence 7656666667899999985 32 11 0 0122333333344567899999998 666666678899999854
Q ss_pred c
Q 014454 407 N 407 (424)
Q Consensus 407 ~ 407 (424)
.
T Consensus 261 ~ 261 (326)
T 2ghs_A 261 N 261 (326)
T ss_dssp C
T ss_pred C
Confidence 3
No 220
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.08 E-value=8.4e-08 Score=88.10 Aligned_cols=205 Identities=12% Similarity=-0.018 Sum_probs=127.7
Q ss_pred ceeEEEecCCCCcEEEEEeC-CCeEEEEeCCCCCCCCCCCCCCCCcEE-EecCCCceeEEEecCCCCceEEEEeCCCcEE
Q 014454 127 EVNRARYMPQNPFLIATKTV-SAEVYVFDYSKHPSKPPLDGACSPDLR-LRGHSTEGYGLSWSKFKEGHLLSGSDDAQIC 204 (424)
Q Consensus 127 ~v~~~~~~p~~~~~latg~~-dg~v~iw~~~~~~~~~~~~~~~~~~~~-~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~ 204 (424)
....++|+|+++.++++... ++.|.++| .+ .+.... +. ... ++.+.|.+...+++.+.||.+.
T Consensus 126 ~p~~~~~spDG~~l~v~n~~~~~~v~viD-~t----------~~~~~~~i~-~~~---~~~~~~~~~~~~~~~~~dg~~~ 190 (373)
T 2mad_H 126 YSWMNANTPNNADLLFFQFAAGPAVGLVV-QG----------GSSDDQLLS-SPT---CYHIHPGAPSTFYLLCAQGGLA 190 (373)
T ss_pred CccceEECCCCCEEEEEecCCCCeEEEEE-CC----------CCEEeEEcC-CCc---eEEEEeCCCceEEEEcCCCCEE
Confidence 35579999999865555433 57899999 76 232333 22 111 2455666766778888899999
Q ss_pred EEeCCCCCCCCcccceeeeecCCcc-EeeEEEecCCCcEEEEEeCCCeEEEEEcCCCCCCCCeeeeec----------cC
Q 014454 205 LWDINAAPKNKSLEAMQIFKVHEGV-VEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVA----------HQ 273 (424)
Q Consensus 205 iwd~~~~~~~~~~~~~~~~~~~~~~-v~~~~~~~~~~~~~~s~~~dg~i~i~d~~~~~~~~~~~~~~~----------~~ 273 (424)
+++. +++..........+ ....+ .....+.+++..++.+. ..+.+.+.|+..... ..+..+.. ..
T Consensus 191 ~vd~-~g~~~~~~~~~~~~-~~~~p~~~~~~~~~~~~~~~~~~-~~~~v~vid~~~~~~-~v~~~~~~~~~~~~~~~~~p 266 (373)
T 2mad_H 191 KTDH-AGGAAGAGLVGAML-TAAQNLLTQPAQANKSGRIVWPV-YSGKILQADISAAGA-TNKAPIDALSGGRKADTWRP 266 (373)
T ss_pred EEEC-CCcEEEEEeccccc-cCCcceeecceeEecCCEEEEEc-CCceEEEEeccCCcc-eEeeeeeecCCcccccceec
Confidence 9999 65332111000001 11122 22345666665555443 678999999976431 11111110 12
Q ss_pred CCeeEEEecCCCCeEEEEEe---------CCCcEEEEECCCCCCcceEecCCCCCEEEEEEcCCCCcEEEEEE-CCCeEE
Q 014454 274 SEVNCLAFNPFNEWILATGS---------TDKTVKLFDLRKISTALHTFDSHKEEVFQVGWNPKNETILASCC-LGRRLM 343 (424)
Q Consensus 274 ~~v~~v~~~~~~~~~l~tg~---------~dg~i~iwd~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~l~s~~-~dg~i~ 343 (424)
.....++++|++..++++.. ..+.|.++|+.+ .+.+.++.. .....+++|+|+++.+++++. .++.|.
T Consensus 267 ~g~~~~~~s~d~~~lyV~~~~~~~~~~~~~~~~V~VID~~t-~~vv~~i~~-g~~p~~i~~s~Dg~~~l~v~~~~~~~V~ 344 (373)
T 2mad_H 267 GGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGLV-GQTSSQISL-GHDVDAISVAQDGGPDLYALSAGTEVLH 344 (373)
T ss_pred CceEeEEECCCCCEEEEEeccCCcccccCCCCeEEEEECCC-CEEEEEEEC-CCCcCeEEECCCCCeEEEEEcCCCCeEE
Confidence 23445788999887665543 235799999998 677777754 446899999999974666666 589999
Q ss_pred EeeCCCCCc
Q 014454 344 VWDLSRIDE 352 (424)
Q Consensus 344 iwd~~~~~~ 352 (424)
++|+.+.+.
T Consensus 345 ViD~~t~~v 353 (373)
T 2mad_H 345 IYDAGAGDQ 353 (373)
T ss_pred EEECCCCCE
Confidence 999988653
No 221
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=99.08 E-value=8.1e-07 Score=77.51 Aligned_cols=223 Identities=8% Similarity=0.044 Sum_probs=143.3
Q ss_pred ceeEEEecCCCCcEEEEEeCCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCceeEEEecCCCCceEEEEeCCCcEEEE
Q 014454 127 EVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDDAQICLW 206 (424)
Q Consensus 127 ~v~~~~~~p~~~~~latg~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~iw 206 (424)
.+..++|.|++..++++-...+.|.+++.... .....+........++++.+.+..++++-...+.|.++
T Consensus 37 ~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~----------~~~~~~~~~~~~p~~ia~d~~~~~lyv~d~~~~~I~~~ 106 (267)
T 1npe_A 37 VIIGLAFDCVDKVVYWTDISEPSIGRASLHGG----------EPTTIIRQDLGSPEGIALDHLGRTIFWTDSQLDRIEVA 106 (267)
T ss_dssp EEEEEEEETTTTEEEEEETTTTEEEEEESSSC----------CCEEEECTTCCCEEEEEEETTTTEEEEEETTTTEEEEE
T ss_pred cEEEEEEecCCCEEEEEECCCCEEEEEecCCC----------CcEEEEECCCCCccEEEEEecCCeEEEEECCCCEEEEE
Confidence 57789999977767777777889999998751 11222222234678999998766455555667899999
Q ss_pred eCCCCCCCCcccceeeeecCCccEeeEEEecCCCcEEEEEeC--CCeEEEEEcCCCCCCCCeeee-eccCCCeeEEEecC
Q 014454 207 DINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGD--DQYLLIWDLRTPSVSKPVQSV-VAHQSEVNCLAFNP 283 (424)
Q Consensus 207 d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~--dg~i~i~d~~~~~~~~~~~~~-~~~~~~v~~v~~~~ 283 (424)
++..... . ............++++|++..++++... .+.|..+++.... ...+ ...-.....+++++
T Consensus 107 ~~~g~~~----~--~~~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~~----~~~~~~~~~~~P~gia~d~ 176 (267)
T 1npe_A 107 KMDGTQR----R--VLFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTN----RRILAQDNLGLPNGLTFDA 176 (267)
T ss_dssp ETTSCSC----E--EEECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCC----CEEEECTTCSCEEEEEEET
T ss_pred EcCCCCE----E--EEEECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCCC----cEEEEECCCCCCcEEEEcC
Confidence 9864321 1 1111112457899999977777766544 4788888886432 1222 12234678999999
Q ss_pred CCCeEEEEEeCCCcEEEEECCCCCCcceEecCCCCCEEEEEEcCCCCcEEEEEECCCeEEEeeCCCCCcccCCCCcCCCC
Q 014454 284 FNEWILATGSTDKTVKLFDLRKISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPEDAEDGP 363 (424)
Q Consensus 284 ~~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~ 363 (424)
++.+++++-...+.|.++|+.. ......+.. ......++.. +..++++....+.|.++|..++
T Consensus 177 ~~~~lyv~d~~~~~I~~~~~~g-~~~~~~~~~-~~~P~gi~~d--~~~lyva~~~~~~v~~~d~~~g------------- 239 (267)
T 1npe_A 177 FSSQLCWVDAGTHRAECLNPAQ-PGRRKVLEG-LQYPFAVTSY--GKNLYYTDWKTNSVIAMDLAIS------------- 239 (267)
T ss_dssp TTTEEEEEETTTTEEEEEETTE-EEEEEEEEC-CCSEEEEEEE--TTEEEEEETTTTEEEEEETTTT-------------
T ss_pred CCCEEEEEECCCCEEEEEecCC-CceEEEecC-CCCceEEEEe--CCEEEEEECCCCeEEEEeCCCC-------------
Confidence 8887777777788999999875 222222222 2344667664 4456666666789999998764
Q ss_pred CeeeEEEcCC-CCCcceEEeCCCCC
Q 014454 364 PELLFIHGGH-TSKISDFSWNPCED 387 (424)
Q Consensus 364 ~~~~~~~~~h-~~~v~~~~~~~~~~ 387 (424)
..+..+... ......+++.|++.
T Consensus 240 -~~~~~i~~g~~~~p~gi~~~~~~~ 263 (267)
T 1npe_A 240 -KEMDTFHPHKQTRLYGITIALSQC 263 (267)
T ss_dssp -EEEEEECCSSCCCCCCEEEECSCC
T ss_pred -CceEEEccccccccceeeecCccC
Confidence 333333322 22367778877754
No 222
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=99.06 E-value=8.3e-07 Score=77.45 Aligned_cols=229 Identities=7% Similarity=-0.030 Sum_probs=142.9
Q ss_pred CeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCceeEEEecCCCCceEEEEeCCCcEEEEeCCCCCCCCcccceeeeecCC
Q 014454 148 AEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHE 227 (424)
Q Consensus 148 g~v~iw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~ 227 (424)
+.|+.+++....... ......+......+.+++|++.+..++++-..++.|..+++..... ........
T Consensus 10 ~~I~~~~~~g~~~~~-----~~~~~~~~~~~~~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~------~~~~~~~~ 78 (267)
T 1npe_A 10 GKIERLPLERNTMKK-----TEAKAFLHIPAKVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEP------TTIIRQDL 78 (267)
T ss_dssp EEEEEEEESSSCBCG-----GGCEEEEEEEEEEEEEEEEETTTTEEEEEETTTTEEEEEESSSCCC------EEEECTTC
T ss_pred CeEEEEEecCccccc-----ccceeeecCCCCcEEEEEEecCCCEEEEEECCCCEEEEEecCCCCc------EEEEECCC
Confidence 578888887521000 0001112212235679999997765555666678999999875421 11111222
Q ss_pred ccEeeEEEecCCCcEEEEEeCCCeEEEEEcCCCCCCCCeeeeeccCCCeeEEEecCCCCeEEEEEeC--CCcEEEEECCC
Q 014454 228 GVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATGST--DKTVKLFDLRK 305 (424)
Q Consensus 228 ~~v~~~~~~~~~~~~~~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~l~tg~~--dg~i~iwd~~~ 305 (424)
.....+++++++..++++-...+.|.++++..... .............++++|++.+++++... .+.|..+++..
T Consensus 79 ~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~---~~~~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg 155 (267)
T 1npe_A 79 GSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQR---RVLFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDG 155 (267)
T ss_dssp CCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC---EEEECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTS
T ss_pred CCccEEEEEecCCeEEEEECCCCEEEEEEcCCCCE---EEEEECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCC
Confidence 46789999998778887877888999999875331 11122222467899999977766666544 46888888764
Q ss_pred CCCcceEec-CCCCCEEEEEEcCCCCcEEEEEECCCeEEEeeCCCCCcccCCCCcCCCCCeeeEEEcCCCCCcceEEeCC
Q 014454 306 ISTALHTFD-SHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPEDAEDGPPELLFIHGGHTSKISDFSWNP 384 (424)
Q Consensus 306 ~~~~~~~~~-~h~~~v~~~~~sp~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~ 384 (424)
.....+. ..-.....++++|++..++++....+.|.++++.... ......+ ......++..
T Consensus 156 --~~~~~~~~~~~~~P~gia~d~~~~~lyv~d~~~~~I~~~~~~g~~--------------~~~~~~~-~~~P~gi~~d- 217 (267)
T 1npe_A 156 --TNRRILAQDNLGLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQPG--------------RRKVLEG-LQYPFAVTSY- 217 (267)
T ss_dssp --CCCEEEECTTCSCEEEEEEETTTTEEEEEETTTTEEEEEETTEEE--------------EEEEEEC-CCSEEEEEEE-
T ss_pred --CCcEEEEECCCCCCcEEEEcCCCCEEEEEECCCCEEEEEecCCCc--------------eEEEecC-CCCceEEEEe-
Confidence 2222222 2234678999999877677777778899999987521 1111122 1223566654
Q ss_pred CCCcEEEEEeCCCcEEEEecCCccC
Q 014454 385 CEDWVISSVAEDNILQIWQMAENIY 409 (424)
Q Consensus 385 ~~~~~l~s~~~dg~i~vw~~~~~~~ 409 (424)
+.+++++....+.|.+++..++..
T Consensus 218 -~~~lyva~~~~~~v~~~d~~~g~~ 241 (267)
T 1npe_A 218 -GKNLYYTDWKTNSVIAMDLAISKE 241 (267)
T ss_dssp -TTEEEEEETTTTEEEEEETTTTEE
T ss_pred -CCEEEEEECCCCeEEEEeCCCCCc
Confidence 454677766778999999987643
No 223
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=99.02 E-value=1e-07 Score=82.14 Aligned_cols=208 Identities=14% Similarity=0.122 Sum_probs=140.4
Q ss_pred cEEEEEEeccCCc--eeEEEecCCCCcEEEEEeC--CCeEEEEeCCCCCCCCCCCCCCCCcEEEec-CCCceeEEEecCC
Q 014454 115 KVQIIQQINHDGE--VNRARYMPQNPFLIATKTV--SAEVYVFDYSKHPSKPPLDGACSPDLRLRG-HSTEGYGLSWSKF 189 (424)
Q Consensus 115 ~~~~~~~~~h~~~--v~~~~~~p~~~~~latg~~--dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~-h~~~v~~l~~~~~ 189 (424)
..+++..+.|... ...++|+|++. ++++.+. ++.|+++|..+ .+....+.- .......+++.
T Consensus 8 ~~~vv~~~p~~~~~f~~Gl~~~~dg~-Lyvstg~~~~s~v~~iD~~t----------g~v~~~i~l~~~~fgeGi~~~-- 74 (266)
T 2iwa_A 8 IVEVLNEFPHDPYAFTQGLVYAENDT-LFESTGLYGRSSVRQVALQT----------GKVENIHKMDDSYFGEGLTLL-- 74 (266)
T ss_dssp EEEEEEEEECCTTCCEEEEEECSTTE-EEEEECSTTTCEEEEEETTT----------CCEEEEEECCTTCCEEEEEEE--
T ss_pred CceEEEEEECCCCCCcccEEEeCCCe-EEEECCCCCCCEEEEEECCC----------CCEEEEEecCCCcceEEEEEe--
Confidence 5678889999865 57999999864 5555443 57999999987 333444331 11122345554
Q ss_pred CCceEEEEeCCCcEEEEeCCCCCCCCcccceeeeecCCccEeeEEEecCCCcEEEEEeCCCeEEEEEcCCCCCCCCeeee
Q 014454 190 KEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSV 269 (424)
Q Consensus 190 ~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~dg~i~i~d~~~~~~~~~~~~~ 269 (424)
+..+.++.-.++.+.++|..+.+. +..+..... ....+++++..++++- .++.|.++|..+.+. +..+
T Consensus 75 g~~lyv~t~~~~~v~viD~~t~~v------~~~i~~g~~--~g~glt~Dg~~l~vs~-gs~~l~viD~~t~~v---~~~I 142 (266)
T 2iwa_A 75 NEKLYQVVWLKNIGFIYDRRTLSN------IKNFTHQMK--DGWGLATDGKILYGSD-GTSILYEIDPHTFKL---IKKH 142 (266)
T ss_dssp TTEEEEEETTCSEEEEEETTTTEE------EEEEECCSS--SCCEEEECSSSEEEEC-SSSEEEEECTTTCCE---EEEE
T ss_pred CCEEEEEEecCCEEEEEECCCCcE------EEEEECCCC--CeEEEEECCCEEEEEC-CCCeEEEEECCCCcE---EEEE
Confidence 444556666789999999976532 333321111 1234556788888654 688999999988664 3333
Q ss_pred ec--cC---CCeeEEEecCCCCeEEEEEeCCCcEEEEECCCCCCcceEecCC-------------CCCEEEEEEcCCCCc
Q 014454 270 VA--HQ---SEVNCLAFNPFNEWILATGSTDKTVKLFDLRKISTALHTFDSH-------------KEEVFQVGWNPKNET 331 (424)
Q Consensus 270 ~~--~~---~~v~~v~~~~~~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~~h-------------~~~v~~~~~sp~~~~ 331 (424)
.- .. ..++.+.|. ++ .+++....++.|.+.|..+ ++.+..+... ....+.++|+|+++.
T Consensus 143 ~Vg~~~~p~~~~nele~~-dg-~lyvn~~~~~~V~vID~~t-g~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~ 219 (266)
T 2iwa_A 143 NVKYNGHRVIRLNELEYI-NG-EVWANIWQTDCIARISAKD-GTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKR 219 (266)
T ss_dssp ECEETTEECCCEEEEEEE-TT-EEEEEETTSSEEEEEETTT-CCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTE
T ss_pred EECCCCcccccceeEEEE-CC-EEEEecCCCCeEEEEECCC-CcEEEEEECCCcccccccccccccCceEEEEEcCCCCE
Confidence 21 11 236778887 55 4676666788999999998 6777766532 135689999999988
Q ss_pred EEEEEECCCeEEEeeCCCC
Q 014454 332 ILASCCLGRRLMVWDLSRI 350 (424)
Q Consensus 332 ~l~s~~~dg~i~iwd~~~~ 350 (424)
+++++...+.+...++...
T Consensus 220 lfVTgk~~~~v~~i~l~~~ 238 (266)
T 2iwa_A 220 IFVTGKLWPKLFEIKLHLV 238 (266)
T ss_dssp EEEEETTCSEEEEEEEEEC
T ss_pred EEEECCCCCeEEEEEEecc
Confidence 9999989999999888653
No 224
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=99.02 E-value=2.6e-08 Score=90.71 Aligned_cols=213 Identities=9% Similarity=-0.095 Sum_probs=122.2
Q ss_pred EEEEeccCCceeEEEecCCCCcEEEEEe---------CCCeEEEEeCCCCCCCCCCCCCCCCcEEEecC-------CCce
Q 014454 118 IIQQINHDGEVNRARYMPQNPFLIATKT---------VSAEVYVFDYSKHPSKPPLDGACSPDLRLRGH-------STEG 181 (424)
Q Consensus 118 ~~~~~~h~~~v~~~~~~p~~~~~latg~---------~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~h-------~~~v 181 (424)
++.++.-.... .+.++|+++.+.++.. .++.|.+||..+ .+...++... ....
T Consensus 58 v~~~i~vG~~P-~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T----------~~vv~~I~v~~~~~~~~g~~P 126 (368)
T 1mda_H 58 TLGHSLGAFLS-LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVT----------FLPIADIELPDAPRFSVGPRV 126 (368)
T ss_dssp EEEEEEECTTC-EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTT----------CCEEEEEEETTSCSCCBSCCT
T ss_pred EEEEEeCCCCC-ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCC----------CCEEEEEECCCccccccCCCc
Confidence 34444333233 7999999986665542 468999999988 4555665432 1346
Q ss_pred eEEEecCCCCceEEEEeC--CCcEEE--EeCCCCCCCCcccc---eeeeecC---------CccEeeEEE----------
Q 014454 182 YGLSWSKFKEGHLLSGSD--DAQICL--WDINAAPKNKSLEA---MQIFKVH---------EGVVEDVAW---------- 235 (424)
Q Consensus 182 ~~l~~~~~~~~~l~s~~~--dg~i~i--wd~~~~~~~~~~~~---~~~~~~~---------~~~v~~~~~---------- 235 (424)
..++++|+++ +++++.. +..|.+ +|+.+ ...+.. ......+ .+.+..+..
T Consensus 127 ~~ia~SpDGk-~lyVan~~~~~~v~V~~iD~~t---v~~i~v~~~~~~~p~g~~~~~~~~~dg~~~~vd~~~~~~~~~~v 202 (368)
T 1mda_H 127 HIIGNCASSA-CLLFFLFGSSAAAGLSVPGASD---DQLTKSASCFHIHPGAAATHYLGSCPASLAASDLAAAPAAAGIV 202 (368)
T ss_dssp TSEEECTTSS-CEEEEECSSSCEEEEEETTTEE---EEEEECSSCCCCEEEETTEEECCCCTTSCEEEECCSSCCCCEEC
T ss_pred ceEEEcCCCC-EEEEEccCCCCeEEEEEEchhh---ceEEECCCceEEccCCCeEEEEEcCCCCEEEEECccccccCCeE
Confidence 7899999998 5666653 467888 88854 111100 0000000 000000000
Q ss_pred ----------------ecCCCcEEEEEeCCCeEEEEEcCCCCCCCCeeeeec----------cCCCeeEEEecCCCCeEE
Q 014454 236 ----------------HLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVA----------HQSEVNCLAFNPFNEWIL 289 (424)
Q Consensus 236 ----------------~~~~~~~~~s~~~dg~i~i~d~~~~~~~~~~~~~~~----------~~~~v~~v~~~~~~~~~l 289 (424)
.+++..++ ..+. +.+.+.|+..... +.+..+.. .......++++|++.+++
T Consensus 203 ~~~~t~~i~vg~~P~~~~~~~~~~-~vs~-~~V~viD~~~~~~-~v~~~~~~~~~~~~~~~~~p~g~~~v~~s~dg~~ly 279 (368)
T 1mda_H 203 GAQCTGAQNCSSQAAQANYPGMLV-WAVA-SSILQGDIPAAGA-TMKAAIDGNESGRKADNFRSAGFQMVAKLKNTDGIM 279 (368)
T ss_dssp CCCSCTTSCBCSCCEEETTTTEEE-ECBS-SCCEEEECCSSCC-EEECCCCSSCTHHHHTTEEECSSSCEEEETTTTEEE
T ss_pred EEEeeeeeeCCCCccccccCCEEE-EEcC-CEEEEEECCCCcc-eEEEEEEeccccccccccccCcceeeEEcCCCCEEE
Confidence 22222222 2222 5566666543211 00000000 011122268999998766
Q ss_pred EEEe-C-------CCcEEEEECCCCCCcceEecCCCCCEEEEEEcCCCCcEEEEEE-CCCeEEEeeCCCC
Q 014454 290 ATGS-T-------DKTVKLFDLRKISTALHTFDSHKEEVFQVGWNPKNETILASCC-LGRRLMVWDLSRI 350 (424)
Q Consensus 290 ~tg~-~-------dg~i~iwd~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~l~s~~-~dg~i~iwd~~~~ 350 (424)
++.. . ++.+.++|+.+ .+.+..+... .....++|+|+++.++++.. .++.|.++|+.+.
T Consensus 280 V~~~~~~~~~~~~~~~~~ViD~~t-~~vv~~i~vg-~~p~gi~~s~Dg~~l~va~~~~~~~VsVID~~t~ 347 (368)
T 1mda_H 280 ILTVEHSRSCLAAAENTSSVTASV-GQTSGPISNG-HDSDAIIAAQDGASDNYANSAGTEVLDIYDAASD 347 (368)
T ss_dssp EEEEECSSCTTSCEEEEEEEESSS-CCEEECCEEE-EEECEEEECCSSSCEEEEEETTTTEEEEEESSSC
T ss_pred EEeccccCcccccCCCEEEEECCC-CeEEEEEECC-CCcceEEECCCCCEEEEEccCCCCeEEEEECCCC
Confidence 6544 2 23566999998 5667776653 36899999999987888888 6999999999986
No 225
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=99.01 E-value=3.3e-08 Score=93.90 Aligned_cols=249 Identities=10% Similarity=0.120 Sum_probs=156.1
Q ss_pred CCCcEEEEEeCCCeEEEEeCCCCCCCCCCCCCCCCcEEEe-cCCCceeEEEe-c-CCCCceEEEEe--------------
Q 014454 136 QNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLR-GHSTEGYGLSW-S-KFKEGHLLSGS-------------- 198 (424)
Q Consensus 136 ~~~~~latg~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~-~h~~~v~~l~~-~-~~~~~~l~s~~-------------- 198 (424)
+|+.++++...++.|.+.|+.+ .+....+. .....+..+++ . |++. ++++++
T Consensus 100 DG~~lfVnd~~~~rVavIdl~t----------~~~~~ii~ip~g~~phg~~~~~~p~~~-~v~~~~~~~~p~~~dg~~l~ 168 (595)
T 1fwx_A 100 DGRFLFMNDKANTRVARVRCDV----------MKCDAILEIPNAKGIHGLRPQKWPRSN-YVFCNGEDETPLVNDGTNME 168 (595)
T ss_dssp EEEEEEEEETTTTEEEEEETTT----------TEEEEEEECSSCCSEEEEEECCSSBCS-EEEEEECSCEESSCSSSSTT
T ss_pred CCCEEEEEcCCCCEEEEEECCC----------ceEeeEEeCCCCCCCcceeeeecCCCc-EEEEecccccccCCCCcccc
Confidence 7877888777788999999988 33333222 12345778887 4 8787 566663
Q ss_pred ----CCCcEEEEeCCCCCCCCcccceeeeecCCccEeeEEEecCCCcEEEEEeCC-------------------------
Q 014454 199 ----DDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDD------------------------- 249 (424)
Q Consensus 199 ----~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~d------------------------- 249 (424)
.++.+.+.|..+.+ ....+.- .+....++++|+++.+++++...
T Consensus 169 ~~~~~~~~vtvID~~t~~------v~~qI~V-gg~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~ 241 (595)
T 1fwx_A 169 DVANYVNVFTAVDADKWE------VAWQVLV-SGNLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEI 241 (595)
T ss_dssp CGGGEEEEEEEEETTTTE------EEEEEEE-SSCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHH
T ss_pred cccccCceEEEEECCCCe------EEEEEEe-CCCccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccce
Confidence 34678899987642 2222221 12456678899998887665433
Q ss_pred ------------CeEEEEEcCCCCCCCCeeeeeccCCCeeEEEecCCCCeEEEEEeCCCcEEEEECCCCC----------
Q 014454 250 ------------QYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATGSTDKTVKLFDLRKIS---------- 307 (424)
Q Consensus 250 ------------g~i~i~d~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~l~tg~~dg~i~iwd~~~~~---------- 307 (424)
+.|.|.|.++.+....+..+.. .....++.++|+|+++++++..+.+|.++|+.+..
T Consensus 242 ~~~v~~Gk~~~i~~V~VID~~~~~~~~~~~~Ipv-g~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~ 320 (595)
T 1fwx_A 242 EKAIAAGDYQELNGVKVVDGRKEASSLFTRYIPI-ANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPR 320 (595)
T ss_dssp HHHHHHTCSEEETTEEEEECSGGGCCSSEEEEEE-ESSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGG
T ss_pred eEeccCCCeeEECcEEEEeCcccCCceeEEEEec-CCCceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcc
Confidence 2366777766211011223322 34567899999999988888889999999998631
Q ss_pred -CcceEecCCCCCEEEEEEcCCCCcEEEEEECCCeEEEeeCCCCCcccCCCCcCCCCCeeeEEEcCCC-----CCcceEE
Q 014454 308 -TALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPEDAEDGPPELLFIHGGHT-----SKISDFS 381 (424)
Q Consensus 308 -~~~~~~~~h~~~v~~~~~sp~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~-----~~v~~~~ 381 (424)
..+.... -......++|+|+| ...++.-.|+.|.+||+....... .. +.....+..+..|- ..-.++.
T Consensus 321 ~~v~~~v~-vG~gP~h~aF~~dG-~aY~t~~ldsqV~kwdi~~a~~~~--~g--~~~~~vi~kidV~yqpGh~~~~~g~t 394 (595)
T 1fwx_A 321 SAVVAEPE-LGLGPLHTAFDGRG-NAYTSLFLDSQVVKWNIEDAIRAY--AG--EKVDPIKDKLDVHYQPGHLKTVMGET 394 (595)
T ss_dssp GGEEECCB-CCSCEEEEEECTTS-EEEEEETTTTEEEEEEHHHHHHHH--HT--CSCCCEEEEEECSSCEEEEEETTTTS
T ss_pred cceEEEcC-CCCCcceEEECCCC-eEEEEEecCCcEEEEEhhHhhhhh--cc--cccceeEEEeecccccccceeccceE
Confidence 1222333 24578899999999 677788889999999987621000 00 00013344444332 2234557
Q ss_pred eCCCCCcEEEEEeCC-CcE-----------EEEecCCccC
Q 014454 382 WNPCEDWVISSVAED-NIL-----------QIWQMAENIY 409 (424)
Q Consensus 382 ~~~~~~~~l~s~~~d-g~i-----------~vw~~~~~~~ 409 (424)
++|+|++++++.... .++ +++|++.+.+
T Consensus 395 ~~~DGk~l~~~Nk~skdr~~~~gp~~~~~~ql~dis~~~m 434 (595)
T 1fwx_A 395 LDATNDWLVCLSKFSKDRFLNVGPLKPENDQLIDISGDKM 434 (595)
T ss_dssp TTCCSSEEEEEESCCTTSSCCCCSSCCEEEEEEECSSSSC
T ss_pred eCCCCCEEEEcCCCCccccccCCCCCCCcceEEEcCCCcE
Confidence 789999766554432 234 8899876654
No 226
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=98.97 E-value=1.6e-07 Score=85.52 Aligned_cols=244 Identities=10% Similarity=0.020 Sum_probs=145.6
Q ss_pred EEecCCCCcEEEEEeC----CCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCceeEEEecCCCCceEEEEe--------
Q 014454 131 ARYMPQNPFLIATKTV----SAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGS-------- 198 (424)
Q Consensus 131 ~~~~p~~~~~latg~~----dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~-------- 198 (424)
....|++..++++-.. ++.|.++|..+ .+.+..+.....+ .++++|+++. ++++.
T Consensus 38 ~~~~pd~~~vyV~~~~~~~~~~~V~ViD~~t----------~~v~~~I~vG~~P--~va~spDG~~-lyVan~~~~r~~~ 104 (386)
T 3sjl_D 38 EAPAPDARRVYVNDPAHFAAVTQQFVIDGEA----------GRVIGMIDGGFLP--NPVVADDGSF-IAHASTVFSRIAR 104 (386)
T ss_dssp CCCCCCTTEEEEEECGGGCSSEEEEEEETTT----------TEEEEEEEECSSC--EEEECTTSSC-EEEEEEEEEETTE
T ss_pred eccCCCCCEEEEEcCcccCCCCEEEEEECCC----------CeEEEEEECCCCC--cEEECCCCCE-EEEEccccccccc
Confidence 3446777766665443 67999999987 4445555544444 4999999985 55543
Q ss_pred --CCCcEEEEeCCCCCCCCcccceeeeecC-------CccEeeEEEecCCCcEEEEEe-CCCeEEEEEcCCCCCCCCeee
Q 014454 199 --DDAQICLWDINAAPKNKSLEAMQIFKVH-------EGVVEDVAWHLRHEYLFGSVG-DDQYLLIWDLRTPSVSKPVQS 268 (424)
Q Consensus 199 --~dg~i~iwd~~~~~~~~~~~~~~~~~~~-------~~~v~~~~~~~~~~~~~~s~~-~dg~i~i~d~~~~~~~~~~~~ 268 (424)
.++.|.+||..+.+.. ..+... ......++++|+++.++++.. .++.|.++|+.+.+. +..
T Consensus 105 G~~~~~VsviD~~t~~v~------~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~~~VsVID~~t~~v---v~t 175 (386)
T 3sjl_D 105 GERTDYVEVFDPVTLLPT------ADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAF---KRM 175 (386)
T ss_dssp EEEEEEEEEECTTTCCEE------EEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCEEEEEETTTTEE---EEE
T ss_pred CCCCCEEEEEECCCCeEE------EEEECCCccccccCCCCceEEEcCCCCEEEEEEcCCCCeEEEEECCCCcE---EEE
Confidence 3678999999876432 222211 124667999999998886654 378999999999764 444
Q ss_pred eeccCCCeeEEEecCCCCeEEEEEeCCCcEEEEECCCCCCcceEec----CCCCCEE-EEEEc-CCCCcEEEEEECCCeE
Q 014454 269 VVAHQSEVNCLAFNPFNEWILATGSTDKTVKLFDLRKISTALHTFD----SHKEEVF-QVGWN-PKNETILASCCLGRRL 342 (424)
Q Consensus 269 ~~~~~~~v~~v~~~~~~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~----~h~~~v~-~~~~s-p~~~~~l~s~~~dg~i 342 (424)
+.. .+ |....|.+...+++.+.||.+.+.++...++...... .-..++. ...|. ++|+ ++ -.+.+|.|
T Consensus 176 I~v-~g---~~~~~P~g~~~~~~~~~DG~~~~v~~~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~dG~-~~-~vs~~g~V 249 (386)
T 3sjl_D 176 LDV-PD---CYHIFPTAPDTFFMHCRDGSLAKVAFGTEGTPEITHTEVFHPEDEFLINHPAYSQKAGR-LV-WPTYTGKI 249 (386)
T ss_dssp EEC-CS---EEEEEEEETTEEEEEETTSCEEEEECCSSSCCEEEECCCCSCTTSCBCSCCEEETTTTE-EE-EEBTTSEE
T ss_pred EEC-CC---cceeecCCCceeEEECCCCCEEEEECCCCCeEEEeecceeccccccccccceeEcCCCc-EE-EEeCCCEE
Confidence 432 11 1222354544577888899999999876334322211 1112222 24664 5663 33 35668999
Q ss_pred EEeeCCCCCcccCCCCcCCCCCeeeEEE----cC-CCCCcceEEeCCCCCcEEEEEeC---------CCcEEEEecCCcc
Q 014454 343 MVWDLSRIDEEQTPEDAEDGPPELLFIH----GG-HTSKISDFSWNPCEDWVISSVAE---------DNILQIWQMAENI 408 (424)
Q Consensus 343 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~----~~-h~~~v~~~~~~~~~~~~l~s~~~---------dg~i~vw~~~~~~ 408 (424)
.+.|+.......... ..+ +.. .+ .......+++++++..++++... .+.|.+.|+.+..
T Consensus 250 ~v~d~~~~~~~v~~~------~~~-~~~~~~~~g~~p~g~q~~a~~~~~~~lyV~~~~~~~~~hk~~~~~V~viD~~t~k 322 (386)
T 3sjl_D 250 HQIDLSSGDAKFLPA------VEA-LTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGE 322 (386)
T ss_dssp EEEECTTSSCEECCC------EES-SCHHHHHTTEEECSSSCEEEETTTTEEEEEEEECCTTCTTSCEEEEEEEETTTCC
T ss_pred EEEECCCCcceeecc------eec-cccccccccccCCCcceeeECCCCCeEEEEeccccccccCCCCCEEEEEECCCCe
Confidence 999997643110000 000 000 00 11223457788988865555431 2578888988875
Q ss_pred C
Q 014454 409 Y 409 (424)
Q Consensus 409 ~ 409 (424)
+
T Consensus 323 v 323 (386)
T 3sjl_D 323 R 323 (386)
T ss_dssp E
T ss_pred E
Confidence 4
No 227
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=98.97 E-value=9.3e-08 Score=85.36 Aligned_cols=205 Identities=12% Similarity=0.068 Sum_probs=131.3
Q ss_pred cEEEecCCCceeEEEecCCCCceEEEEeCCCcEEEEeCCCCCCCCcccceeeeecCCccEeeEEEecCCCcEEEEEeCCC
Q 014454 171 DLRLRGHSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQ 250 (424)
Q Consensus 171 ~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~dg 250 (424)
...+........+..|+|++..++++...++.|..|+.. +. ...+..+...+..+++++++. ++++...++
T Consensus 37 ~~~l~~~~~~~egp~~~~~g~~l~~~d~~~~~i~~~~~~-g~-------~~~~~~~~~~~~gl~~d~dG~-l~v~~~~~~ 107 (305)
T 3dr2_A 37 LLTLYDQATWSEGPAWWEAQRTLVWSDLVGRRVLGWRED-GT-------VDVLLDATAFTNGNAVDAQQR-LVHCEHGRR 107 (305)
T ss_dssp CEEEECCCSSEEEEEEEGGGTEEEEEETTTTEEEEEETT-SC-------EEEEEESCSCEEEEEECTTSC-EEEEETTTT
T ss_pred eEEEecCCcCccCCeEeCCCCEEEEEECCCCEEEEEeCC-CC-------EEEEeCCCCccceeeECCCCC-EEEEECCCC
Confidence 445555566678899999988677888888999999873 31 223444566789999999986 665555568
Q ss_pred eEEEEEcCCCCCCCCeeeeec-----cCCCeeEEEecCCCCeEEEE----EeC-------------CCcEEEEECCCCCC
Q 014454 251 YLLIWDLRTPSVSKPVQSVVA-----HQSEVNCLAFNPFNEWILAT----GST-------------DKTVKLFDLRKIST 308 (424)
Q Consensus 251 ~i~i~d~~~~~~~~~~~~~~~-----~~~~v~~v~~~~~~~~~l~t----g~~-------------dg~i~iwd~~~~~~ 308 (424)
.|.+|+.. +. +..+.. ....++.++++|+|. ++++ |.. .+.|..||..+ ++
T Consensus 108 ~v~~~~~~-g~----~~~~~~~~~~~~~~~~~~i~~d~dG~-l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~-g~ 180 (305)
T 3dr2_A 108 AITRSDAD-GQ----AHLLVGRYAGKRLNSPNDLIVARDGA-IWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDG-SP 180 (305)
T ss_dssp EEEEECTT-SC----EEEEECEETTEECSCCCCEEECTTSC-EEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSS-CC
T ss_pred EEEEECCC-CC----EEEEEeccCCCccCCCCCEEECCCCC-EEEeCcCCCccccccccccccccCCCeEEEEcCCC-Cc
Confidence 89999975 33 222211 123467899999997 5665 332 24677777754 33
Q ss_pred cceEecCCCCCEEEEEEcCCCCcEEEEEECC------CeEEEeeCCCCCcccCCCCcCCCCCeeeEEEcCCCCCcceEEe
Q 014454 309 ALHTFDSHKEEVFQVGWNPKNETILASCCLG------RRLMVWDLSRIDEEQTPEDAEDGPPELLFIHGGHTSKISDFSW 382 (424)
Q Consensus 309 ~~~~~~~h~~~v~~~~~sp~~~~~l~s~~~d------g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~ 382 (424)
... +. .......++|+|++.. |+.+... +.|.+|++..... . ....+ ..........+++
T Consensus 181 ~~~-~~-~~~~p~gl~~spdg~~-lyv~~~~~~~~~~~~i~~~~~~~~~l-~---------~~~~~-~~~~~~~pdgi~~ 246 (305)
T 3dr2_A 181 LQR-MA-DLDHPNGLAFSPDEQT-LYVSQTPEQGHGSVEITAFAWRDGAL-H---------DRRHF-ASVPDGLPDGFCV 246 (305)
T ss_dssp CEE-EE-EESSEEEEEECTTSSE-EEEEECCC---CCCEEEEEEEETTEE-E---------EEEEE-ECCSSSCCCSEEE
T ss_pred EEE-Ee-cCCCCcceEEcCCCCE-EEEEecCCcCCCCCEEEEEEecCCCc-c---------CCeEE-EECCCCCCCeEEE
Confidence 322 22 3456788999999974 4444443 6899999864320 0 00111 1112344678999
Q ss_pred CCCCCcEEEEEeCCCcEEEEecCCcc
Q 014454 383 NPCEDWVISSVAEDNILQIWQMAENI 408 (424)
Q Consensus 383 ~~~~~~~l~s~~~dg~i~vw~~~~~~ 408 (424)
+++|. +.++. .+ .|.+|+.....
T Consensus 247 d~~G~-lwv~~-~~-gv~~~~~~g~~ 269 (305)
T 3dr2_A 247 DRGGW-LWSSS-GT-GVCVFDSDGQL 269 (305)
T ss_dssp CTTSC-EEECC-SS-EEEEECTTSCE
T ss_pred CCCCC-EEEec-CC-cEEEECCCCCE
Confidence 99998 55554 44 49999986543
No 228
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=98.96 E-value=1.6e-07 Score=86.28 Aligned_cols=213 Identities=13% Similarity=0.167 Sum_probs=131.9
Q ss_pred EEec--CCCCceEEEEeCCCcEEEEeCCCCCCCCcccceeeee------c-CCccEeeEEEecCCCcEEEEEeCC-----
Q 014454 184 LSWS--KFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFK------V-HEGVVEDVAWHLRHEYLFGSVGDD----- 249 (424)
Q Consensus 184 l~~~--~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~------~-~~~~v~~~~~~~~~~~~~~s~~~d----- 249 (424)
..++ ++++.+++++..++.|.++|+.+..... +..+.+. . .......+...|++ +++++..+
T Consensus 87 ~~~~~~~~r~~l~v~~l~s~~I~viD~~t~p~~p--~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG--i~Vs~~g~~~g~~ 162 (462)
T 2ece_A 87 PNGKPNIERRFLIVPGLRSSRIYIIDTKPNPREP--KIIKVIEPEEVKKVSGYSRLHTVHCGPDA--IYISALGNEEGEG 162 (462)
T ss_dssp TTCCTTCCSCEEEEEBTTTCCEEEEECCSCTTSC--EEEEEECHHHHHHHHCEEEEEEEEECSSC--EEEEEEEETTSCS
T ss_pred cccCCCccCCEEEEccCCCCeEEEEECCCCCCCc--eeeeeechhhcccccCCCcccceeECCCe--EEEEcCCCcCCCC
Confidence 3446 7777667778889999999997553322 2223231 1 11245667788998 55566555
Q ss_pred -CeEEEEEcCCCCCCCCeeeeeccC---CCeeEEEecCCCCeEEEEEe-------------------CCCcEEEEECCCC
Q 014454 250 -QYLLIWDLRTPSVSKPVQSVVAHQ---SEVNCLAFNPFNEWILATGS-------------------TDKTVKLFDLRKI 306 (424)
Q Consensus 250 -g~i~i~d~~~~~~~~~~~~~~~~~---~~v~~v~~~~~~~~~l~tg~-------------------~dg~i~iwd~~~~ 306 (424)
|.|.++|..+.+. +..+.... ..-..+.|+|+++ .+++.. ...+|.+||+.+
T Consensus 163 ~g~v~vlD~~T~~v---~~~~~~~~~~~~~~Yd~~~~p~~~-~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~- 237 (462)
T 2ece_A 163 PGGILMLDHYSFEP---LGKWEIDRGDQYLAYDFWWNLPNE-VLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRK- 237 (462)
T ss_dssp CCEEEEECTTTCCE---EEECCSBCTTCCCCCCEEEETTTT-EEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTT-
T ss_pred CCeEEEEECCCCeE---EEEEccCCCCccccceEEECCCCC-EEEEccCcCccccccccchhhhhhccCCEEEEEECCC-
Confidence 7899999998764 44443221 2244588899998 466653 368999999997
Q ss_pred CCcceEecCC--CCCEEEEEE--cCCCCcEEEEEE-----CCCeEEEeeCCCCCcc--cCCCCcC---CC-CCeeeEEEc
Q 014454 307 STALHTFDSH--KEEVFQVGW--NPKNETILASCC-----LGRRLMVWDLSRIDEE--QTPEDAE---DG-PPELLFIHG 371 (424)
Q Consensus 307 ~~~~~~~~~h--~~~v~~~~~--sp~~~~~l~s~~-----~dg~i~iwd~~~~~~~--~~~~~~~---~~-~~~~~~~~~ 371 (424)
++.+.++... ......+.| +|+++..++++- .+++|.+|....+.-. +...... .. -+.+...+.
T Consensus 238 ~k~~~tI~vg~~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vIdi~~~~v~~~lp~~~~~f~ 317 (462)
T 2ece_A 238 RKRIHSLTLGEENRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVIEIPAEPLEGNLPEILKPFK 317 (462)
T ss_dssp TEEEEEEESCTTEEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEEEEEEEECCEECCSSCCGGGGGGT
T ss_pred CcEeeEEecCCCCCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCceeEEEEEeCCCccccccccccccccc
Confidence 6777777652 134455656 999987666666 7788888776532100 0000000 00 000000000
Q ss_pred CCCCCcceEEeCCCCCcEEEEEeCCCcEEEEecC
Q 014454 372 GHTSKISDFSWNPCEDWVISSVAEDNILQIWQMA 405 (424)
Q Consensus 372 ~h~~~v~~~~~~~~~~~~l~s~~~dg~i~vw~~~ 405 (424)
+-.....++.+++++++|.++.-..+.|.++++.
T Consensus 318 ~~~~~pa~I~lS~DGrfLYVSnrg~d~VavfdV~ 351 (462)
T 2ece_A 318 AVPPLVTDIDISLDDKFLYLSLWGIGEVRQYDIS 351 (462)
T ss_dssp EECCCCCCEEECTTSCEEEEEETTTTEEEEEECS
T ss_pred cCCCceeEEEECCCCCEEEEEeCCCCEEEEEEec
Confidence 0023478899999999877887788999999986
No 229
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=98.93 E-value=7.7e-08 Score=87.47 Aligned_cols=214 Identities=11% Similarity=0.046 Sum_probs=128.1
Q ss_pred CceeEEEecCCCCceEEEEe--CCCcEEEEeCCCCCCCCcccce-eeeecCCccEeeEEEecCCCcEEEEEeC-----CC
Q 014454 179 TEGYGLSWSKFKEGHLLSGS--DDAQICLWDINAAPKNKSLEAM-QIFKVHEGVVEDVAWHLRHEYLFGSVGD-----DQ 250 (424)
Q Consensus 179 ~~v~~l~~~~~~~~~l~s~~--~dg~i~iwd~~~~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~~~s~~~-----dg 250 (424)
..+..+++++++. ++++.. .++.++||.+..+. ...+... .....+-..+..+++++++. ++++-.. ++
T Consensus 17 ~~p~~va~~~~g~-~~v~~~~~~~~~~~l~~~~~g~-~~~~p~~~~~~~~~~~~p~gv~~d~~g~-L~v~D~g~~~~~~~ 93 (343)
T 2qe8_A 17 LAPGNITLTPDGR-LFLSLHQFYQPEMQVAELTQDG-LIPFPPQSGNAIITFDTVLGIKSDGNGI-VWMLDNGNQSKSVP 93 (343)
T ss_dssp SCEEEEEECTTSC-EEEEECGGGCCSCSEEEEETTE-EEESCCCCSSCCCCCSCEEEEEECSSSE-EEEEECHHHHTSCC
T ss_pred CCcceEEECCCCC-EEEEeCCCCCCceEEEEECCCC-eecCCCcccCcccceeEeeEEEEcCCCc-EEEEcCCCCcCCCC
Confidence 6789999999887 677653 23435566554221 1100000 01123456899999999875 6555433 57
Q ss_pred eEEEEEcCCCCCCCCeeeeec------cCCCeeEEEecCCCCeEEEEEe---CCCcEEEEECCCCCCcceEecCC-----
Q 014454 251 YLLIWDLRTPSVSKPVQSVVA------HQSEVNCLAFNPFNEWILATGS---TDKTVKLFDLRKISTALHTFDSH----- 316 (424)
Q Consensus 251 ~i~i~d~~~~~~~~~~~~~~~------~~~~v~~v~~~~~~~~~l~tg~---~dg~i~iwd~~~~~~~~~~~~~h----- 316 (424)
.|.+||+.+++. +..+.. +...+..+++++++..++++.. .++.|.+||+.+ ++....+..|
T Consensus 94 ~i~~~d~~tg~~---~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~-g~~~r~~~~~~~~~~ 169 (343)
T 2qe8_A 94 KLVAWDTLNNQL---SRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQT-GLAARVLQGYPGIAP 169 (343)
T ss_dssp EEEEEETTTTEE---EEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTT-CCEEEECTTCTTTSC
T ss_pred eEEEEECCCCeE---EEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCC-CCEEEEecCCCcccc
Confidence 899999987653 222221 2345689999987666666665 678999999876 3333333221
Q ss_pred ------------------------CCCEEEEEEcCCCCcEEEEEECCC-eEEEeeCCCCCcccCCCCcCCCCCee--eEE
Q 014454 317 ------------------------KEEVFQVGWNPKNETILASCCLGR-RLMVWDLSRIDEEQTPEDAEDGPPEL--LFI 369 (424)
Q Consensus 317 ------------------------~~~v~~~~~sp~~~~~l~s~~~dg-~i~iwd~~~~~~~~~~~~~~~~~~~~--~~~ 369 (424)
...+..++|+|+++. |+.+..++ .+..++........ .. ..+. ...
T Consensus 170 ~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~-ly~~~~~~~~l~~~~~~~~~~~~-~~-----~~~~~~~~~ 242 (343)
T 2qe8_A 170 EDIDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEW-LYLSPMHSTSMYRIKSADLSNLQ-LT-----DAELGSKIE 242 (343)
T ss_dssp CSCCCEETTEECBEECTTSCEECCCCCEEEEEECTTSCE-EEEEESSCSEEEEEEHHHHTCTT-CC-----HHHHHTTCE
T ss_pred cccceeECCEEEEeccCCCceeceecccceeEeccCCCE-EEEEeCCCCeEEEEEHHHhcCCC-CC-----hhhhhcceE
Confidence 124688999999964 55555554 45444432111000 00 0000 001
Q ss_pred EcCCCCCcceEEeCCCCCcEEEEEeCCCcEEEEecCCc
Q 014454 370 HGGHTSKISDFSWNPCEDWVISSVAEDNILQIWQMAEN 407 (424)
Q Consensus 370 ~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~ 407 (424)
..++......++++++|. ++++...++.|.+|+..++
T Consensus 243 ~~g~~g~pdgia~d~~G~-l~va~~~~~~V~~~d~~~G 279 (343)
T 2qe8_A 243 RYSEKPICDGISIDKDHN-IYVGDLAHSAIGVITSADR 279 (343)
T ss_dssp EEEECCSCSCEEECTTCC-EEEEEGGGTEEEEEETTTT
T ss_pred ecccCCCCceEEECCCCC-EEEEccCCCeEEEEECCCC
Confidence 113334567899999998 7888888999999999443
No 230
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=98.92 E-value=1.5e-07 Score=87.16 Aligned_cols=249 Identities=8% Similarity=-0.034 Sum_probs=143.3
Q ss_pred CCCcEEEEEeCC----CeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCceeEEEecCCCCceEEEEe----------CCC
Q 014454 136 QNPFLIATKTVS----AEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGS----------DDA 201 (424)
Q Consensus 136 ~~~~~latg~~d----g~v~iw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~----------~dg 201 (424)
++..++++...+ +.|.++|..+ .+.+..+..-..+ .+.++|+++. |+++. .++
T Consensus 83 ~~~~vyV~n~~~~~~~~~VsVID~~t----------~~vv~~I~vG~~P--gia~SpDgk~-lyVan~~~~~~~~G~~~~ 149 (426)
T 3c75_H 83 DARRVYIQDPAHFAAITQQFVIDGST----------GRILGMTDGGFLP--HPVAAEDGSF-FAQASTVFERIARGKRTD 149 (426)
T ss_dssp CTTEEEEEECTTTCSSEEEEEEETTT----------TEEEEEEEECSSC--EEEECTTSSC-EEEEEEEEEETTEEEEEE
T ss_pred CCCEEEEECCCcCCCCCeEEEEECCC----------CEEEEEEECCCCC--ceEECCCCCE-EEEEeccccccccCCCCC
Confidence 444455554433 7999999987 4555555544444 8999999985 55544 467
Q ss_pred cEEEEeCCCCCCCCcccce-eeeecCCccEeeEEEecCCCcEEEEEeC-CCeEEEEEcCCCCCCCCeeeeeccCCCeeEE
Q 014454 202 QICLWDINAAPKNKSLEAM-QIFKVHEGVVEDVAWHLRHEYLFGSVGD-DQYLLIWDLRTPSVSKPVQSVVAHQSEVNCL 279 (424)
Q Consensus 202 ~i~iwd~~~~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~~~s~~~-dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~v 279 (424)
.|.++|..+.+....+..- ..-.........++++|++++++++... ++.|.++|+.+.+. +..+... . +.
T Consensus 150 ~VsviD~~t~~vv~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~~~~~VsVID~~t~kv---v~~I~v~-g---~~ 222 (426)
T 3c75_H 150 YVEVFDPVTFLPIADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFSPAPAVGVVDLEGKTF---DRMLDVP-D---CY 222 (426)
T ss_dssp EEEEECTTTCCEEEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECSSSCEEEEEETTTTEE---EEEEECC-S---EE
T ss_pred EEEEEECCCCcEEEEEECCCccccccCCCcceEEEcCCCCEEEEEecCCCCeEEEEECCCCeE---EEEEEcC-C---ce
Confidence 8999999877432222100 0000012345688999999988866543 68999999998764 4443321 1 13
Q ss_pred EecCCCCeEEEEEeCCCcEEEEECCCCCCcce----EecCCCCCE-EEEEEcCCCCcEEEEEECCCeEEEeeCCCCCccc
Q 014454 280 AFNPFNEWILATGSTDKTVKLFDLRKISTALH----TFDSHKEEV-FQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQ 354 (424)
Q Consensus 280 ~~~~~~~~~l~tg~~dg~i~iwd~~~~~~~~~----~~~~h~~~v-~~~~~sp~~~~~l~s~~~dg~i~iwd~~~~~~~~ 354 (424)
...|.+...+++.+.||.+.+.++.. ++... .+.....++ ..+.+.+++..++ ..+..+.+.+.|+.......
T Consensus 223 ~~~p~g~~~~v~~~~dG~~~~V~~~~-~~v~~~~~~~~~v~~~p~~~~~~~~~dg~~~~-~~s~~g~V~ViD~~~~~~~v 300 (426)
T 3c75_H 223 HIFPASPTVFYMNCRDGSLARVDFAD-GETKVTNTEVFHTEDELLINHPAFSLRSGRLV-WPTYTGKIFQADLTAEGATF 300 (426)
T ss_dssp EEEEEETTEEEEEETTSSEEEEECCT-TCCEEEECCCCSCTTSCBCSCCEECTTTCEEE-EEBTTSEEEEEEECSSCEEE
T ss_pred eeccCCCcEEEEEcCCCCEEEEECCC-CcEEEEeeeeeccCCCceeeEeeecCCCCEEE-EEeCCCcEEEEeccCCceEE
Confidence 34455545677777888888888843 33332 122212222 2457888887544 44567899999986532110
Q ss_pred CCCCc-CCCCCeeeEEEcCCCCCcceEEeCCCCCcEEEEEe---------CCCcEEEEecCCccC
Q 014454 355 TPEDA-EDGPPELLFIHGGHTSKISDFSWNPCEDWVISSVA---------EDNILQIWQMAENIY 409 (424)
Q Consensus 355 ~~~~~-~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~---------~dg~i~vw~~~~~~~ 409 (424)
..... .......... .......++++|+++.++++.. .++.|.+.|+.+...
T Consensus 301 ~~~~~~~~~~~i~~g~---~p~g~~~va~s~dg~rlyVa~~~~~~gthk~~s~~VsVID~~T~kv 362 (426)
T 3c75_H 301 RAPIEALTEAERADDW---RPGGWQQTAYHRQSDRIYLLVDQRDEWKHKAASRFVVVLNAETGER 362 (426)
T ss_dssp CCCEESSCTTTGGGTE---EECSSSCEEEEGGGTEEEEEEEECCTTCTTSCEEEEEEEETTTCCE
T ss_pred eeeeeecccccccccc---ccCCceeeEEcCCCCEEEEEecccccccccCCCCEEEEEECCCCeE
Confidence 00000 0000000000 0111234789999886666543 135799999988754
No 231
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=98.89 E-value=1.5e-09 Score=99.89 Aligned_cols=179 Identities=11% Similarity=0.037 Sum_probs=95.1
Q ss_pred EEEEEeCCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCceeEEEecCCCCceEEEEeCCCcEEEEeCCCCCCCCcccc
Q 014454 140 LIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEA 219 (424)
Q Consensus 140 ~latg~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~ 219 (424)
.+++++.||.|+.||..+ .+....+.. ..+.+..+..++. ++++++.||.|+.||..+++....+.
T Consensus 11 ~v~~gs~dg~v~a~d~~t----------G~~~W~~~~--~~~~s~p~~~~g~-~~v~~s~dg~l~a~d~~tG~~~w~~~- 76 (369)
T 2hz6_A 11 LLFVSTLDGSLHAVSKRT----------GSIKWTLKE--DPVLQVPTHVEEP-AFLPDPNDGSLYTLGSKNNEGLTKLP- 76 (369)
T ss_dssp EEEEEETTSEEEEEETTT----------CCEEEEEEC--CCSCCCC-----C-CEEECTTTCCEEEC-----CCSEECS-
T ss_pred EEEEEcCCCEEEEEECCC----------CCEEEEecC--CCceecceEcCCC-EEEEeCCCCEEEEEECCCCceeeeee-
Confidence 688889999999999887 444555554 4555555555555 67778899999999998775432221
Q ss_pred eeeeecCC-ccEe-eEEEecCCCcEEEEEeCCCeEEEEEcCCCCCCCCeeeeeccCCCeeEEEecCCCCeEEEEEeCCCc
Q 014454 220 MQIFKVHE-GVVE-DVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATGSTDKT 297 (424)
Q Consensus 220 ~~~~~~~~-~~v~-~~~~~~~~~~~~~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~l~tg~~dg~ 297 (424)
.+. ..+. ...+. .+. .+++++.++.|+.||.++++.. ..+..+. ...++|.+. .+++++.++.
T Consensus 77 -----~~~~~~~~~sp~~~-~~~-~v~~g~~dg~v~a~D~~tG~~~---w~~~~~~----~~~~~p~~~-~v~~~~~dg~ 141 (369)
T 2hz6_A 77 -----FTIPELVQASPCRS-SDG-ILYMGKKQDIWYVIDLLTGEKQ---QTLSSAF----ADSLSPSTS-LLYLGRTEYT 141 (369)
T ss_dssp -----CCHHHHHTTCSCC-------CCCCEEEEEEEEECCC------------------------------EEEEEEEEE
T ss_pred -----ccCccccccCceEe-cCC-EEEEEeCCCEEEEEECCCCcEE---EEecCCC----cccccccCC-EEEEEecCCE
Confidence 111 0110 01111 233 3457788999999999988752 2222222 234556666 5788888999
Q ss_pred EEEEECCCCCCcceEecCCCCCEEEEEEcCCC---CcEEEEEECCCeEEEeeCCCCC
Q 014454 298 VKLFDLRKISTALHTFDSHKEEVFQVGWNPKN---ETILASCCLGRRLMVWDLSRID 351 (424)
Q Consensus 298 i~iwd~~~~~~~~~~~~~h~~~v~~~~~sp~~---~~~l~s~~~dg~i~iwd~~~~~ 351 (424)
|+.||.++ ++.+..+..+. ....++.++. . .+++++.||.|..||..++.
T Consensus 142 v~a~d~~t-G~~~W~~~~~~--~~~~~~~~~~~~~~-~v~~~~~dg~v~a~d~~tG~ 194 (369)
T 2hz6_A 142 ITMYDTKT-RELRWNATYFD--YAASLPEDDVDYKM-SHFVSNGDGLVVTVDSESGD 194 (369)
T ss_dssp EECCCSSS-SSCCCEEEEEE--ECCBCCCCCTTCCC-CEEEEETSCEEEEECTTTCC
T ss_pred EEEEECCC-CCEEEeEeccc--ccCccccCCccccc-eEEEECCCCEEEEEECCCCc
Confidence 99999998 55554443211 1223333321 2 36678899999999998764
No 232
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.87 E-value=6.6e-07 Score=76.21 Aligned_cols=195 Identities=15% Similarity=0.208 Sum_probs=125.3
Q ss_pred CcEEEEEEeccCCce--eEEEecCCCCcEEEEEeCCC--eEEEEeCCCCCCCCCCCCCCCCcEEEecCCCceeEEEecCC
Q 014454 114 GKVQIIQQINHDGEV--NRARYMPQNPFLIATKTVSA--EVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKF 189 (424)
Q Consensus 114 ~~~~~~~~~~h~~~v--~~~~~~p~~~~~latg~~dg--~v~iw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~ 189 (424)
...++++.++|.... ..+.|+ ++ .++.+.+.+| .|+++|+.+ .+....+.-. .........+.
T Consensus 29 ~~~~vv~~~phd~~~ftqGL~~~-~~-~LyestG~~g~S~v~~vD~~T----------gkv~~~~~l~-~~~FgeGit~~ 95 (262)
T 3nol_A 29 YDYQIVHSYPHDTKAFTEGFFYR-NG-YFYESTGLNGRSSIRKVDIES----------GKTLQQIELG-KRYFGEGISDW 95 (262)
T ss_dssp EEEEEEEEEECCTTCEEEEEEEE-TT-EEEEEEEETTEEEEEEECTTT----------CCEEEEEECC-TTCCEEEEEEE
T ss_pred cceEEEEEecCCCCcccceEEEE-CC-EEEEECCCCCCceEEEEECCC----------CcEEEEEecC-CccceeEEEEe
Confidence 357888899998665 889998 45 4666666666 899999987 3434444322 23333222233
Q ss_pred CCceEEEEeCCCcEEEEeCCCCCCCCcccceeeeecCCccEeeEEEecCCCcEEEEEeCCCeEEEEEcCCCCCCCCeeee
Q 014454 190 KEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSV 269 (424)
Q Consensus 190 ~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~dg~i~i~d~~~~~~~~~~~~~ 269 (424)
+..+.++.-.++.+.++|..+.+. +..+.. ...-..+ ++++..++++- .++.|.++|..+.+. +..+
T Consensus 96 g~~ly~ltw~~~~v~v~D~~t~~~------~~ti~~-~~eG~gl--t~dg~~L~~Sd-Gs~~i~~iDp~T~~v---~~~I 162 (262)
T 3nol_A 96 KDKIVGLTWKNGLGFVWNIRNLRQ------VRSFNY-DGEGWGL--THNDQYLIMSD-GTPVLRFLDPESLTP---VRTI 162 (262)
T ss_dssp TTEEEEEESSSSEEEEEETTTCCE------EEEEEC-SSCCCCE--EECSSCEEECC-SSSEEEEECTTTCSE---EEEE
T ss_pred CCEEEEEEeeCCEEEEEECccCcE------EEEEEC-CCCceEE--ecCCCEEEEEC-CCCeEEEEcCCCCeE---EEEE
Confidence 554555566789999999987643 333332 1222334 45677777554 478899999998664 3333
Q ss_pred ec--cC---CCeeEEEecCCCCeEEEEEeCCCcEEEEECCCCCCcceEecCC------------CCCEEEEEEcCCCCcE
Q 014454 270 VA--HQ---SEVNCLAFNPFNEWILATGSTDKTVKLFDLRKISTALHTFDSH------------KEEVFQVGWNPKNETI 332 (424)
Q Consensus 270 ~~--~~---~~v~~v~~~~~~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~~h------------~~~v~~~~~sp~~~~~ 332 (424)
.. .. ..++-+.|. +|. +++..-.+..|.+.|.++ ++.+..+... ..-.+.|+|+|+++.+
T Consensus 163 ~V~~~g~~~~~lNELe~~-~G~-lyan~w~~~~I~vIDp~t-G~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~l 239 (262)
T 3nol_A 163 TVTAHGEELPELNELEWV-DGE-IFANVWQTNKIVRIDPET-GKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRL 239 (262)
T ss_dssp ECEETTEECCCEEEEEEE-TTE-EEEEETTSSEEEEECTTT-CBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEE
T ss_pred EeccCCccccccceeEEE-CCE-EEEEEccCCeEEEEECCC-CcEEEEEECCcCccccccccCcCCceEEEEEcCCCCEE
Confidence 22 12 334557776 454 676666788999999998 6666665532 2356899999998877
Q ss_pred EEEEE
Q 014454 333 LASCC 337 (424)
Q Consensus 333 l~s~~ 337 (424)
+++|-
T Consensus 240 fVTGK 244 (262)
T 3nol_A 240 FVTGK 244 (262)
T ss_dssp EEEET
T ss_pred EEECC
Confidence 77663
No 233
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=98.86 E-value=8.5e-07 Score=79.75 Aligned_cols=218 Identities=9% Similarity=-0.003 Sum_probs=138.3
Q ss_pred EEEEEeCCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCceeEEEecCCCCceEEEEeCCCcEEEEeCCCCCCCCcccc
Q 014454 140 LIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEA 219 (424)
Q Consensus 140 ~latg~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~ 219 (424)
.+..++.++.|..+|... ........+...+.++...+++. +..++.++.|..+|.. +..
T Consensus 109 ~l~v~t~~~~l~~~d~~g-----------~~~~~~~~~~~~~~~~~~~~~g~--l~vgt~~~~l~~~d~~-g~~------ 168 (330)
T 3hxj_A 109 ILYVTSMDGHLYAINTDG-----------TEKWRFKTKKAIYATPIVSEDGT--IYVGSNDNYLYAINPD-GTE------ 168 (330)
T ss_dssp EEEEECTTSEEEEECTTS-----------CEEEEEECSSCCCSCCEECTTSC--EEEECTTSEEEEECTT-SCE------
T ss_pred EEEEEecCCEEEEEcCCC-----------CEEEEEcCCCceeeeeEEcCCCE--EEEEcCCCEEEEECCC-CCE------
Confidence 466677888999998752 22333444444556666665554 7778888999999987 422
Q ss_pred eeeeecCCccEeeEEEecCCCcEEEEEeCCCeEEEEEcCCCCCCCCeeeeeccCCCeeEEEecCCCCeEEEEEeCCCcEE
Q 014454 220 MQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATGSTDKTVK 299 (424)
Q Consensus 220 ~~~~~~~~~~v~~~~~~~~~~~~~~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~l~tg~~dg~i~ 299 (424)
...+......+.++...+++. ++ .++ +.|..+| .++.. +.........+.++...+++. |..++.++.|.
T Consensus 169 ~~~~~~~~~~~~~~~~d~~g~-l~-v~t--~~l~~~d-~~g~~---~~~~~~~~~~~~~~~~~~~g~--l~v~t~~~gl~ 238 (330)
T 3hxj_A 169 KWRFKTNDAITSAASIGKDGT-IY-FGS--DKVYAIN-PDGTE---KWNFYAGYWTVTRPAISEDGT--IYVTSLDGHLY 238 (330)
T ss_dssp EEEEECSSCCCSCCEECTTCC-EE-EES--SSEEEEC-TTSCE---EEEECCSSCCCSCCEECTTSC--EEEEETTTEEE
T ss_pred eEEEecCCCceeeeEEcCCCE-EE-EEe--CEEEEEC-CCCcE---EEEEccCCcceeceEECCCCe--EEEEcCCCeEE
Confidence 222333345667777776665 44 444 8899999 55442 334444456688888888775 56677788888
Q ss_pred EEECCCCCCcceEecCCCCCEEEEEEcCCCCcEEEEEECCCeEEEeeCCCCCcccCCCCcCCCCCeeeEEEcCCCCCcce
Q 014454 300 LFDLRKISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPEDAEDGPPELLFIHGGHTSKISD 379 (424)
Q Consensus 300 iwd~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~ 379 (424)
.+|.. +..+..+......+..+...+++. |..++.+|.|..+|. .+ ..+..+......+.+
T Consensus 239 ~~~~~--g~~~~~~~~~~~~~~~~~~~~~g~--l~v~t~~ggl~~~d~-~g--------------~~~~~~~~~~~~~~~ 299 (330)
T 3hxj_A 239 AINPD--GTEKWRFKTGKRIESSPVIGNTDT--IYFGSYDGHLYAINP-DG--------------TEKWNFETGSWIIAT 299 (330)
T ss_dssp EECTT--SCEEEEEECSSCCCSCCEECTTSC--EEEECTTCEEEEECT-TS--------------CEEEEEECSSCCCSC
T ss_pred EECCC--CCEeEEeeCCCCccccceEcCCCe--EEEecCCCCEEEECC-CC--------------cEEEEEEcCCccccc
Confidence 88743 455555554444455566666663 667788888999985 32 223333334456778
Q ss_pred EEeCCCCCcEEEEEeCCCcEEEEecCCcc
Q 014454 380 FSWNPCEDWVISSVAEDNILQIWQMAENI 408 (424)
Q Consensus 380 ~~~~~~~~~~l~s~~~dg~i~vw~~~~~~ 408 (424)
+...+++. |..++.+|.+++.......
T Consensus 300 ~~~d~~g~--l~~gt~~G~~~~~~~~~~~ 326 (330)
T 3hxj_A 300 PVIDENGT--IYFGTRNGKFYALFNLEHH 326 (330)
T ss_dssp CEECTTCC--EEEECTTSCEEEEEC----
T ss_pred eEEcCCCE--EEEEcCCCeEEEEeccccc
Confidence 88888887 4456889999988766543
No 234
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=98.85 E-value=5.8e-06 Score=74.24 Aligned_cols=241 Identities=7% Similarity=-0.033 Sum_probs=141.6
Q ss_pred CceeEEEecCCCCcEEEEEeCCCeEEEEeCCCCCCCCCCCCCCCCcEEEec--------------------CCCceeEEE
Q 014454 126 GEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRG--------------------HSTEGYGLS 185 (424)
Q Consensus 126 ~~v~~~~~~p~~~~~latg~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~--------------------h~~~v~~l~ 185 (424)
....+++|.+++. ++.++..++.|..|+.... ....+.. ....+.+++
T Consensus 19 ~~p~~i~~d~~g~-~l~v~~~~~~i~~~~~~~~-----------~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~ 86 (322)
T 2fp8_A 19 YAPNSFTFDSTNK-GFYTSVQDGRVIKYEGPNS-----------GFVDFAYASPYWNKAFCENSTDAEKRPLCGRTYDIS 86 (322)
T ss_dssp SCCCCEECCTTCS-SEEEECTTSEEEEECCTTT-----------CEEEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEE
T ss_pred CCceEEEEcCCCC-EEEEEcCCCeEEEECCCCC-----------ceEEEecccccccccccccccchhccccCCCCceEE
Confidence 3466788999875 5667788899999987641 1111210 113478899
Q ss_pred ecCCCCceEEEEeCCCcEEEEeCCCCCCCCcccceee-eec-CCccEeeEEEec-CCCcEEEEEeC--------------
Q 014454 186 WSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQI-FKV-HEGVVEDVAWHL-RHEYLFGSVGD-------------- 248 (424)
Q Consensus 186 ~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~-~~~-~~~~v~~~~~~~-~~~~~~~s~~~-------------- 248 (424)
+.+.+. .|+.+...+.|..+|..++.. ..+.. ..+ .....+.+++.+ ++. ++++...
T Consensus 87 ~~~~~g-~l~v~d~~~~i~~~d~~~g~~----~~~~~~~~~~~~~~p~~i~~d~~~G~-l~v~d~~~~~~~~~~~~~~~~ 160 (322)
T 2fp8_A 87 YNLQNN-QLYIVDCYYHLSVVGSEGGHA----TQLATSVDGVPFKWLYAVTVDQRTGI-VYFTDVSTLYDDRGVQQIMDT 160 (322)
T ss_dssp EETTTT-EEEEEETTTEEEEECTTCEEC----EEEESEETTEECSCEEEEEECTTTCC-EEEEESCSSCCTTCHHHHHHH
T ss_pred EcCCCC-cEEEEECCCCEEEEeCCCCEE----EEecccCCCCcccccceEEEecCCCE-EEEECCcccccccccceehcc
Confidence 987333 366665555688888764321 11111 110 113478899999 875 5545322
Q ss_pred ---CCeEEEEEcCCCCCCCCeeeeeccCCCeeEEEecCCCCeEEEEEeCCCcEEEEECCCCC-CcceEecCCCCCEEEEE
Q 014454 249 ---DQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATGSTDKTVKLFDLRKIS-TALHTFDSHKEEVFQVG 324 (424)
Q Consensus 249 ---dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~l~tg~~dg~i~iwd~~~~~-~~~~~~~~h~~~v~~~~ 324 (424)
++.|..+|..++.. ..+.......+.|+++|++..++++-...+.|.+|++.... .....+....+ ...++
T Consensus 161 ~~~~g~v~~~d~~~~~~----~~~~~~~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~~~~g-P~gi~ 235 (322)
T 2fp8_A 161 SDKTGRLIKYDPSTKET----TLLLKELHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTAEVLVKIPN-PGNIK 235 (322)
T ss_dssp TCCCEEEEEEETTTTEE----EEEEEEESCCCEEEECTTSSEEEEEEGGGTEEEEEESSSTTTTCEEEEEECSS-EEEEE
T ss_pred cCCCceEEEEeCCCCEE----EEeccCCccCcceEECCCCCEEEEEeCCCCeEEEEECCCCcCCccceEEeCCC-CCCeE
Confidence 36788888765442 22212223457799999988666665667899999987421 11112211223 78899
Q ss_pred EcCCCCcEEEEEEC----------CCeEEEeeCCCCCcccCCCCcCCCCCeeeEEEcCC----CCCcceEEeCCCCCcEE
Q 014454 325 WNPKNETILASCCL----------GRRLMVWDLSRIDEEQTPEDAEDGPPELLFIHGGH----TSKISDFSWNPCEDWVI 390 (424)
Q Consensus 325 ~sp~~~~~l~s~~~----------dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h----~~~v~~~~~~~~~~~~l 390 (424)
+.++|. ++++... .+.|..+|... ..+..+... ...++.+++ .++. |+
T Consensus 236 ~d~~G~-l~va~~~~~~~~~~~~~~~~v~~~d~~G---------------~~~~~~~~~~g~~~~~~~~~~~-~~g~-L~ 297 (322)
T 2fp8_A 236 RNADGH-FWVSSSEELDGNMHGRVDPKGIKFDEFG---------------NILEVIPLPPPFAGEHFEQIQE-HDGL-LY 297 (322)
T ss_dssp ECTTSC-EEEEEEEETTSSTTSCEEEEEEEECTTS---------------CEEEEEECCTTTTTSCCCEEEE-ETTE-EE
T ss_pred ECCCCC-EEEEecCcccccccCCCccEEEEECCCC---------------CEEEEEECCCCCccccceEEEE-eCCE-EE
Confidence 999996 5555443 35677777532 223223221 234666766 3455 77
Q ss_pred EEEeCCCcEEEEecCCc
Q 014454 391 SSVAEDNILQIWQMAEN 407 (424)
Q Consensus 391 ~s~~~dg~i~vw~~~~~ 407 (424)
++....+.|.++++...
T Consensus 298 v~~~~~~~i~~~~~~~~ 314 (322)
T 2fp8_A 298 IGTLFHGSVGILVYDKK 314 (322)
T ss_dssp EECSSCSEEEEEEC---
T ss_pred EeecCCCceEEEecccc
Confidence 77777889999988643
No 235
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=98.84 E-value=2.8e-05 Score=70.53 Aligned_cols=241 Identities=9% Similarity=-0.014 Sum_probs=148.7
Q ss_pred CceeEEEecCCCCcEEEEEeCCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCceeEEEecCCCCceEEEEeCCCcEEE
Q 014454 126 GEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDDAQICL 205 (424)
Q Consensus 126 ~~v~~~~~~p~~~~~latg~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~i 205 (424)
+..+|.+..+ .+.++++ ....|+..++.. .....+......+.+++|.+.+..++++-...+.|..
T Consensus 34 d~~~C~~~~~-~~~ll~~--~~~~I~~i~~~g-----------~~~~~~~~~~~~~~~l~~d~~~~~ly~~D~~~~~I~r 99 (349)
T 3v64_C 34 DRRSCKALGP-EPVLLFA--NRIDIRQVLPHR-----------SEYTLLLNNLENAIALDFHHRRELVFWSDVTLDRILR 99 (349)
T ss_dssp TSSCEEESSS-CCEEEEE--CBSCEEEECTTS-----------CCEEEEECSCSCEEEEEEETTTTEEEEEETTTTEEEE
T ss_pred CCCccccccc-CceeEee--cccceEEEeCCC-----------CeeEEeecCCCceEEEEEeccccEEEEEeccCCceEE
Confidence 3445556555 3334433 334577777764 1122333334457899999876645555556788999
Q ss_pred EeCCCCCCCCcccceeeeecCCccEeeEEEecCCCcEEEEEeCCCeEEEEEcCCCCCCCCeeeeeccCCCeeEEEecCCC
Q 014454 206 WDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFN 285 (424)
Q Consensus 206 wd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~v~~~~~~ 285 (424)
+++..... .............+++.+.+..++.+-...+.|.+.++..... .......-.....++++|.+
T Consensus 100 ~~~~g~~~------~~~~~~~~~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~---~~l~~~~l~~P~~iavdp~~ 170 (349)
T 3v64_C 100 ANLNGSNV------EEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHR---KVLLWQSLEKPRAIALHPME 170 (349)
T ss_dssp EETTSCSC------EEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSC---EEEECTTCSCEEEEEEETTT
T ss_pred EecCCCCc------eEEEeCCCCCccEEEEecCCCeEEEEcCCCCeEEEEcCCCCce---EEEEeCCCCCcceEEEecCc
Confidence 99875431 1111112234578999987778887877788999999875432 22222333567899999987
Q ss_pred CeEEEEEeCC-CcEEEEECCCCCCcceEe-cCCCCCEEEEEEcCCCCcEEEEEECCCeEEEeeCCCCCcccCCCCcCCCC
Q 014454 286 EWILATGSTD-KTVKLFDLRKISTALHTF-DSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPEDAEDGP 363 (424)
Q Consensus 286 ~~~l~tg~~d-g~i~iwd~~~~~~~~~~~-~~h~~~v~~~~~sp~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~ 363 (424)
..++++-... +.|..+++.. .....+ ...-...+.++++|++..++++-...+.|..+++.....
T Consensus 171 g~ly~td~~~~~~I~r~~~dG--~~~~~~~~~~~~~PnGla~d~~~~~lY~aD~~~~~I~~~~~dG~~~----------- 237 (349)
T 3v64_C 171 GTIYWTDWGNTPRIEASSMDG--SGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHR----------- 237 (349)
T ss_dssp TEEEEEECSSSCEEEEEETTS--CSCEESCCSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC-----------
T ss_pred CeEEEeccCCCCEEEEEeCCC--CCcEEEEECCCCCcceEEEeCCCCEEEEEECCCCEEEEEeCCCCce-----------
Confidence 7777776666 7899998874 222332 222346789999998776777766778899999864211
Q ss_pred CeeeEEEcCCCCCcceEEeCCCCCcEEEEEeCCCcEEEEecCCc
Q 014454 364 PELLFIHGGHTSKISDFSWNPCEDWVISSVAEDNILQIWQMAEN 407 (424)
Q Consensus 364 ~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~ 407 (424)
. ...........++++. .+ .++++-...+.|...+..++
T Consensus 238 -~--~~~~~~~~~P~giav~-~~-~ly~td~~~~~V~~~~~~~G 276 (349)
T 3v64_C 238 -K--AVISQGLPHPFAITVF-ED-SLYWTDWHTKSINSANKFTG 276 (349)
T ss_dssp -E--EEECSSCSSEEEEEEE-TT-EEEEEETTTTEEEEEETTTC
T ss_pred -E--EEEeCCCCCceEEEEE-CC-EEEEecCCCCeEEEEEccCC
Confidence 1 1112223345667773 33 36667666777777774333
No 236
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=98.82 E-value=2.8e-05 Score=69.50 Aligned_cols=229 Identities=8% Similarity=-0.025 Sum_probs=141.0
Q ss_pred CCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCceeEEEecCCCCceEEEEeCCCcEEEEeCCCCCCCCcccceeeeecC
Q 014454 147 SAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVH 226 (424)
Q Consensus 147 dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~ 226 (424)
...|+..++.. .. ...+......+.+++|++.+..++++-...+.|..+++........ ....+...
T Consensus 9 ~~~I~~i~~~~----------~~-~~~~~~~~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~--~~~~~~~~ 75 (316)
T 1ijq_A 9 RHEVRKMTLDR----------SE-YTSLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSS--YDTVISRD 75 (316)
T ss_dssp BSSEEEEETTS----------CC-CEEEECSCSSEEEEEEETTTTEEEEEETTTTEEEEEEC----------CEEEECSS
T ss_pred CCeEEEEECCC----------cc-eEehhcCCCceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcc--cEEEEeCC
Confidence 35688889876 12 2223334456789999987765555656678999999875210000 01112112
Q ss_pred CccEeeEEEecCCCcEEEEEeCCCeEEEEEcCCCCCCCCeeeeeccCCCeeEEEecCCCCeEEEEEeCC-CcEEEEECCC
Q 014454 227 EGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATGSTD-KTVKLFDLRK 305 (424)
Q Consensus 227 ~~~v~~~~~~~~~~~~~~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~l~tg~~d-g~i~iwd~~~ 305 (424)
-.....+++.+.+..++++-...+.|.++|+..... .............++++|.+.+++++.... +.|..+++..
T Consensus 76 ~~~p~glavd~~~~~ly~~d~~~~~I~~~~~~g~~~---~~~~~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG 152 (316)
T 1ijq_A 76 IQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKR---KTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNG 152 (316)
T ss_dssp CSCCCEEEEETTTTEEEEEETTTTEEEEEETTSSSE---EEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTS
T ss_pred CCCcCEEEEeecCCeEEEEECCCCEEEEEeCCCCce---EEEEECCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCCC
Confidence 235678999887777887777889999999875331 112222345678999999877666665444 7888888764
Q ss_pred CCCcceEe-cCCCCCEEEEEEcCCCCcEEEEEECCCeEEEeeCCCCCcccCCCCcCCCCCeeeEEEcCCCCCcceEEeCC
Q 014454 306 ISTALHTF-DSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPEDAEDGPPELLFIHGGHTSKISDFSWNP 384 (424)
Q Consensus 306 ~~~~~~~~-~~h~~~v~~~~~sp~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~ 384 (424)
.....+ ...-.....++++|++..++++-+..+.|..+|+..... ..+...........++++.
T Consensus 153 --~~~~~~~~~~~~~P~gla~d~~~~~lY~~D~~~~~I~~~d~dg~~~------------~~~~~~~~~~~~P~giav~- 217 (316)
T 1ijq_A 153 --VDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNR------------KTILEDEKRLAHPFSLAVF- 217 (316)
T ss_dssp --CCEEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC------------EEEEECTTTTSSEEEEEEE-
T ss_pred --CCeEEEEECCCCCceEEEEeccCCEEEEEECCCCeEEEEecCCCce------------EEEeecCCccCCcEEEEEE-
Confidence 333332 222356789999998776666766778999999864211 2222211222345677774
Q ss_pred CCCcEEEEEeCCCcEEEEecCCc
Q 014454 385 CEDWVISSVAEDNILQIWQMAEN 407 (424)
Q Consensus 385 ~~~~~l~s~~~dg~i~vw~~~~~ 407 (424)
.+ .++++-...+.|..++..++
T Consensus 218 ~~-~ly~~d~~~~~V~~~~~~~g 239 (316)
T 1ijq_A 218 ED-KVFWTDIINEAIFSANRLTG 239 (316)
T ss_dssp TT-EEEEEETTTTEEEEEETTTC
T ss_pred CC-EEEEEECCCCeEEEEeCCCC
Confidence 23 46777777788888887544
No 237
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.82 E-value=5.9e-07 Score=76.47 Aligned_cols=191 Identities=13% Similarity=0.097 Sum_probs=126.5
Q ss_pred cEEEEEEeccCCce--eEEEecCCCCcEEEEEeCCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCcee--EEEecCCC
Q 014454 115 KVQIIQQINHDGEV--NRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGY--GLSWSKFK 190 (424)
Q Consensus 115 ~~~~~~~~~h~~~v--~~~~~~p~~~~~latg~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~--~l~~~~~~ 190 (424)
..++++.+.|...- ..+.|+. ..+..+.+.+|.|+++|+.+ .+....+. ..... +++.. +
T Consensus 42 ~~~Vv~~~phd~~~ftqGL~~~~--~~Ly~stG~~g~v~~iD~~T----------gkv~~~~l--~~~~FgeGit~~--g 105 (268)
T 3nok_A 42 VAHIIREYPHATNAFTQGLVFHQ--GHFFESTGHQGTLRQLSLES----------AQPVWMER--LGNIFAEGLASD--G 105 (268)
T ss_dssp EEEEEEEEECCTTCCEEEEEEET--TEEEEEETTTTEEEECCSSC----------SSCSEEEE--CTTCCEEEEEEC--S
T ss_pred ceEEEEEEcCCCccccceEEEEC--CEEEEEcCCCCEEEEEECCC----------CcEEeEEC--CCCcceeEEEEe--C
Confidence 45788888888655 6888874 45788888889999999987 33344441 22333 35543 4
Q ss_pred CceEEEEeCCCcEEEEeCCCCCCCCcccceeeeecCCccEeeEEEecCCCcEEEEEeCCCeEEEEEcCCCCCCCCeeeee
Q 014454 191 EGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVV 270 (424)
Q Consensus 191 ~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~dg~i~i~d~~~~~~~~~~~~~~ 270 (424)
..+.++.-.++.+.+||..+.+. +..+.. ...-..++ +++..++++- .++.|.++|..+.+. +..+.
T Consensus 106 ~~Ly~ltw~~~~v~V~D~~Tl~~------~~ti~~-~~eGwGLt--~Dg~~L~vSd-Gs~~l~~iDp~T~~v---~~~I~ 172 (268)
T 3nok_A 106 ERLYQLTWTEGLLFTWSGMPPQR------ERTTRY-SGEGWGLC--YWNGKLVRSD-GGTMLTFHEPDGFAL---VGAVQ 172 (268)
T ss_dssp SCEEEEESSSCEEEEEETTTTEE------EEEEEC-SSCCCCEE--EETTEEEEEC-SSSEEEEECTTTCCE---EEEEE
T ss_pred CEEEEEEccCCEEEEEECCcCcE------EEEEeC-CCceeEEe--cCCCEEEEEC-CCCEEEEEcCCCCeE---EEEEE
Confidence 54566666789999999977633 333332 22234555 4566677554 588999999998664 33332
Q ss_pred c--cC---CCeeEEEecCCCCeEEEEEeCCCcEEEEECCCCCCcceEecCC-------------CCCEEEEEEcCCCCcE
Q 014454 271 A--HQ---SEVNCLAFNPFNEWILATGSTDKTVKLFDLRKISTALHTFDSH-------------KEEVFQVGWNPKNETI 332 (424)
Q Consensus 271 ~--~~---~~v~~v~~~~~~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~~h-------------~~~v~~~~~sp~~~~~ 332 (424)
- +. ..++-+.|. +|. +++..-.+..|.+.|.++ ++.+..+... ..-.+.|+|+|+++.+
T Consensus 173 V~~~g~~v~~lNeLe~~-dG~-lyanvw~s~~I~vIDp~T-G~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rl 249 (268)
T 3nok_A 173 VKLRGQPVELINELECA-NGV-IYANIWHSSDVLEIDPAT-GTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRI 249 (268)
T ss_dssp CEETTEECCCEEEEEEE-TTE-EEEEETTCSEEEEECTTT-CBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCE
T ss_pred eCCCCcccccccccEEe-CCE-EEEEECCCCeEEEEeCCC-CcEEEEEECCCCcccccccccCcCCceEEEEEcCCCCEE
Confidence 2 22 234667776 464 666666788999999998 6666655431 2356899999998888
Q ss_pred EEEEE
Q 014454 333 LASCC 337 (424)
Q Consensus 333 l~s~~ 337 (424)
++||-
T Consensus 250 fVTGK 254 (268)
T 3nok_A 250 FMTGK 254 (268)
T ss_dssp EEEET
T ss_pred EEeCC
Confidence 87763
No 238
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.80 E-value=1.6e-05 Score=73.28 Aligned_cols=240 Identities=9% Similarity=-0.025 Sum_probs=148.5
Q ss_pred eeEEEecCCCCcEEEEEeCCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCceeEEEecCCCCceEEEEeCCCcEEEEe
Q 014454 128 VNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDDAQICLWD 207 (424)
Q Consensus 128 v~~~~~~p~~~~~latg~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~iwd 207 (424)
-.|.+..+ ...++++ ....|+..++.. .....+......+.+++|.+.+..++++-...+.|..++
T Consensus 79 ~~C~~~~~-~~~l~~~--~~~~I~~i~~~~-----------~~~~~~~~~~~~~~gl~~d~~~~~ly~~D~~~~~I~r~~ 144 (386)
T 3v65_B 79 RSCKALGP-EPVLLFA--NRIDIRQVLPHR-----------SEYTLLLNNLENAIALDFHHRRELVFWSDVTLDRILRAN 144 (386)
T ss_dssp SCEEECSS-CCEEEEE--CBSCEEEECTTS-----------CCCEEEECSCSCEEEEEEETTTTEEEEEETTTTEEEEEE
T ss_pred CeECCccc-cceeEee--cCccceeeccCC-----------CcEEEEecCCCccEEEEEecCCCeEEEEeCCCCcEEEEe
Confidence 34555445 3333333 345688888765 112333334456789999987665555555678899999
Q ss_pred CCCCCCCCcccceeeeecCCccEeeEEEecCCCcEEEEEeCCCeEEEEEcCCCCCCCCeeeeeccCCCeeEEEecCCCCe
Q 014454 208 INAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEW 287 (424)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~ 287 (424)
+..... .............+++.+.+..++++-...+.|.+.++..... .......-.....|+++|.+.+
T Consensus 145 ~~g~~~------~~~~~~~~~~p~glavd~~~g~lY~~d~~~~~I~~~~~dg~~~---~~l~~~~l~~P~giavdp~~g~ 215 (386)
T 3v65_B 145 LNGSNV------EEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHR---KVLLWQSLEKPRAIALHPMEGT 215 (386)
T ss_dssp TTSCCE------EEEECSSCSCCCCEEEETTTTEEEEEETTTTEEEECBTTSCSC---EEEECSSCSCEEEEEEETTTTE
T ss_pred cCCCCc------EEEEeCCCCCccEEEEEeCCCeEEEEcCCCCeEEEEeCCCCce---EEeecCCCCCCcEEEEEcCCCe
Confidence 875421 1111212235578899987778887877788899988875331 2222233356789999998887
Q ss_pred EEEEEeCC-CcEEEEECCCCCCcceEecCCCCCEEEEEEcCCCCcEEEEEECCCeEEEeeCCCCCcccCCCCcCCCCCee
Q 014454 288 ILATGSTD-KTVKLFDLRKISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPEDAEDGPPEL 366 (424)
Q Consensus 288 ~l~tg~~d-g~i~iwd~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~ 366 (424)
++++-... +.|..+++.. ..........-...+.|+|+|++..++++-+..+.|..+++..... .
T Consensus 216 ly~td~~~~~~I~r~~~dG-~~~~~~~~~~~~~PnGlavd~~~~~lY~aD~~~~~I~~~d~dG~~~------------~- 281 (386)
T 3v65_B 216 IYWTDWGNTPRIEASSMDG-SGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHR------------K- 281 (386)
T ss_dssp EEEEECSSSCEEEEEETTS-CSCEEEECSSCSCEEEEEEEGGGTEEEEEETTTTEEEEECTTSCSC------------E-
T ss_pred EEEeccCCCCEEEEEeCCC-CCcEEEEECCCCCeeeEEEeCCCCEEEEEECCCCEEEEEeCCCCee------------E-
Confidence 77766555 7888888874 2222222223345789999987777777777778899999764211 1
Q ss_pred eEEEcCCCCCcceEEeCCCCCcEEEEEeCCCcEEEEecCCc
Q 014454 367 LFIHGGHTSKISDFSWNPCEDWVISSVAEDNILQIWQMAEN 407 (424)
Q Consensus 367 ~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~ 407 (424)
...........++++. .+ .++++-...+.|..++..++
T Consensus 282 -~~~~~~~~~P~giav~-~~-~ly~td~~~~~V~~~~~~~G 319 (386)
T 3v65_B 282 -AVISQGLPHPFAITVF-ED-SLYWTDWHTKSINSANKFTG 319 (386)
T ss_dssp -EEECSSCSSEEEEEEE-TT-EEEEEETTTTEEEEEETTTC
T ss_pred -EEEECCCCCceEEEEE-CC-EEEEeeCCCCeEEEEECCCC
Confidence 1112223345677773 33 36777777788888874443
No 239
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=98.78 E-value=5.7e-07 Score=77.51 Aligned_cols=196 Identities=9% Similarity=-0.002 Sum_probs=129.1
Q ss_pred eeEEEecCCCCceEEEEeC--CCcEEEEeCCCCCCCCcccceeeeecCCccEeeEEEecCCCcEEEEEeCCCeEEEEEcC
Q 014454 181 GYGLSWSKFKEGHLLSGSD--DAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLR 258 (424)
Q Consensus 181 v~~l~~~~~~~~~l~s~~~--dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~dg~i~i~d~~ 258 (424)
..++.|++++. ++++.+. ++.|.++|+.+++....+. +..+ .....+++. +..++++.-.++.+.++|..
T Consensus 23 ~~Gl~~~~dg~-Lyvstg~~~~s~v~~iD~~tg~v~~~i~----l~~~-~fgeGi~~~--g~~lyv~t~~~~~v~viD~~ 94 (266)
T 2iwa_A 23 TQGLVYAENDT-LFESTGLYGRSSVRQVALQTGKVENIHK----MDDS-YFGEGLTLL--NEKLYQVVWLKNIGFIYDRR 94 (266)
T ss_dssp EEEEEECSTTE-EEEEECSTTTCEEEEEETTTCCEEEEEE----CCTT-CCEEEEEEE--TTEEEEEETTCSEEEEEETT
T ss_pred cccEEEeCCCe-EEEECCCCCCCEEEEEECCCCCEEEEEe----cCCC-cceEEEEEe--CCEEEEEEecCCEEEEEECC
Confidence 57999998753 4444433 6899999998875422211 1111 122345554 55788787789999999999
Q ss_pred CCCCCCCeeeeeccCCCeeEEEecCCCCeEEEEEeCCCcEEEEECCCCCCcceEecCCC-----CCEEEEEEcCCCCcEE
Q 014454 259 TPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATGSTDKTVKLFDLRKISTALHTFDSHK-----EEVFQVGWNPKNETIL 333 (424)
Q Consensus 259 ~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~~h~-----~~v~~~~~sp~~~~~l 333 (424)
+.+. +..+......-.. +++++..++++ ..++.|.++|..+ .+.+..+.... ..++.+.|. ++ .++
T Consensus 95 t~~v---~~~i~~g~~~g~g--lt~Dg~~l~vs-~gs~~l~viD~~t-~~v~~~I~Vg~~~~p~~~~nele~~-dg-~ly 165 (266)
T 2iwa_A 95 TLSN---IKNFTHQMKDGWG--LATDGKILYGS-DGTSILYEIDPHT-FKLIKKHNVKYNGHRVIRLNELEYI-NG-EVW 165 (266)
T ss_dssp TTEE---EEEEECCSSSCCE--EEECSSSEEEE-CSSSEEEEECTTT-CCEEEEEECEETTEECCCEEEEEEE-TT-EEE
T ss_pred CCcE---EEEEECCCCCeEE--EEECCCEEEEE-CCCCeEEEEECCC-CcEEEEEEECCCCcccccceeEEEE-CC-EEE
Confidence 8654 4444322122233 44567766655 4688999999988 45555554321 246788888 56 466
Q ss_pred EEEECCCeEEEeeCCCCCcccCCCCcCCCCCeeeEEEcC-------------CCCCcceEEeCCCCCcEEEEEeCCCcEE
Q 014454 334 ASCCLGRRLMVWDLSRIDEEQTPEDAEDGPPELLFIHGG-------------HTSKISDFSWNPCEDWVISSVAEDNILQ 400 (424)
Q Consensus 334 ~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~-------------h~~~v~~~~~~~~~~~~l~s~~~dg~i~ 400 (424)
+....++.|.+.|..++.. +..+.- .....+.++|+|+++.+++++...+.|.
T Consensus 166 vn~~~~~~V~vID~~tg~V--------------~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~~~v~ 231 (266)
T 2iwa_A 166 ANIWQTDCIARISAKDGTL--------------LGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKLWPKLF 231 (266)
T ss_dssp EEETTSSEEEEEETTTCCE--------------EEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETTCSEEE
T ss_pred EecCCCCeEEEEECCCCcE--------------EEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECCCCCeEE
Confidence 6666688999999988643 222211 0124589999999988899998999999
Q ss_pred EEecCCc
Q 014454 401 IWQMAEN 407 (424)
Q Consensus 401 vw~~~~~ 407 (424)
+-++...
T Consensus 232 ~i~l~~~ 238 (266)
T 2iwa_A 232 EIKLHLV 238 (266)
T ss_dssp EEEEEEC
T ss_pred EEEEecc
Confidence 9988764
No 240
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=98.76 E-value=5.1e-09 Score=96.26 Aligned_cols=180 Identities=12% Similarity=-0.015 Sum_probs=90.8
Q ss_pred eEEEEeCCCcEEEEeCCCCCCCCcccceeeeecCCccEeeEEEecCCCcEEEEEeCCCeEEEEEcCCCCCCCCeeeeecc
Q 014454 193 HLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAH 272 (424)
Q Consensus 193 ~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~dg~i~i~d~~~~~~~~~~~~~~~~ 272 (424)
.+++++.||.|..||..+++... .+.. +.+.+..+..++. ++++++.||.|+.||..+++. +.....+
T Consensus 11 ~v~~gs~dg~v~a~d~~tG~~~W------~~~~--~~~~s~p~~~~g~-~~v~~s~dg~l~a~d~~tG~~---~w~~~~~ 78 (369)
T 2hz6_A 11 LLFVSTLDGSLHAVSKRTGSIKW------TLKE--DPVLQVPTHVEEP-AFLPDPNDGSLYTLGSKNNEG---LTKLPFT 78 (369)
T ss_dssp EEEEEETTSEEEEEETTTCCEEE------EEEC--CCSCCCC-----C-CEEECTTTCCEEEC-----CC---SEECSCC
T ss_pred EEEEEcCCCEEEEEECCCCCEEE------EecC--CCceecceEcCCC-EEEEeCCCCEEEEEECCCCce---eeeeecc
Confidence 79999999999999998885432 2222 3444444445554 555778999999999988764 2222111
Q ss_pred C-CCee-EEEecCCCCeEEEEEeCCCcEEEEECCCCCCcceEecCCCCCEEEEEEcCCCCcEEEEEECCCeEEEeeCCCC
Q 014454 273 Q-SEVN-CLAFNPFNEWILATGSTDKTVKLFDLRKISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRI 350 (424)
Q Consensus 273 ~-~~v~-~v~~~~~~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~l~s~~~dg~i~iwd~~~~ 350 (424)
. ..+. +..+. .+. .+++|+.++.|+.||.++ ++.+..+..+. ...++|.+. .+++++.|+.|+.||.+++
T Consensus 79 ~~~~~~~sp~~~-~~~-~v~~g~~dg~v~a~D~~t-G~~~w~~~~~~----~~~~~p~~~-~v~~~~~dg~v~a~d~~tG 150 (369)
T 2hz6_A 79 IPELVQASPCRS-SDG-ILYMGKKQDIWYVIDLLT-GEKQQTLSSAF----ADSLSPSTS-LLYLGRTEYTITMYDTKTR 150 (369)
T ss_dssp HHHHHTTCSCC-------CCCCEEEEEEEEECCC----------------------------EEEEEEEEEEECCCSSSS
T ss_pred CccccccCceEe-cCC-EEEEEeCCCEEEEEECCC-CcEEEEecCCC----cccccccCC-EEEEEecCCEEEEEECCCC
Confidence 1 0010 01111 233 477788899999999998 66666665543 234566664 6788889999999999886
Q ss_pred CcccCCCCcCCCCCeeeEEEcCCCCCcceEEeCCCC---CcEEEEEeCCCcEEEEecCCccC
Q 014454 351 DEEQTPEDAEDGPPELLFIHGGHTSKISDFSWNPCE---DWVISSVAEDNILQIWQMAENIY 409 (424)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~---~~~l~s~~~dg~i~vw~~~~~~~ 409 (424)
...- .+..... ....+.++. . .++.++.||.|+.||..++..
T Consensus 151 ~~~W------------~~~~~~~----~~~~~~~~~~~~~-~v~~~~~dg~v~a~d~~tG~~ 195 (369)
T 2hz6_A 151 ELRW------------NATYFDY----AASLPEDDVDYKM-SHFVSNGDGLVVTVDSESGDV 195 (369)
T ss_dssp SCCC------------EEEEEEE----CCBCCCCCTTCCC-CEEEEETSCEEEEECTTTCCE
T ss_pred CEEE------------eEecccc----cCccccCCccccc-eEEEECCCCEEEEEECCCCcE
Confidence 4311 1111111 222333321 3 355678899999999987743
No 241
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.74 E-value=7e-06 Score=69.27 Aligned_cols=194 Identities=13% Similarity=0.119 Sum_probs=124.5
Q ss_pred CcEEEEEEeccCCc--eeEEEecCCCCcEEEEEeCC--CeEEEEeCCCCCCCCCCCCCCCCcEEEecCCC-ceeEEEecC
Q 014454 114 GKVQIIQQINHDGE--VNRARYMPQNPFLIATKTVS--AEVYVFDYSKHPSKPPLDGACSPDLRLRGHST-EGYGLSWSK 188 (424)
Q Consensus 114 ~~~~~~~~~~h~~~--v~~~~~~p~~~~~latg~~d--g~v~iw~~~~~~~~~~~~~~~~~~~~~~~h~~-~v~~l~~~~ 188 (424)
-..+++..++|... ...+.|++ + .++.+.+.. ..|+++|+.+ .+......-... -.-+++..
T Consensus 7 ~~~~v~~~~phd~~~ftqGL~~~~-~-~LyestG~~g~S~v~~vD~~t----------gkv~~~~~l~~~~fgeGi~~~- 73 (243)
T 3mbr_X 7 QGYRVVKRYPHDTTAFTEGLFYLR-G-HLYESTGETGRSSVRKVDLET----------GRILQRAEVPPPYFGAGIVAW- 73 (243)
T ss_dssp CCEEEEEEEECCTTCCEEEEEEET-T-EEEEEECCTTSCEEEEEETTT----------CCEEEEEECCTTCCEEEEEEE-
T ss_pred cceEEEEEcCCCCccccccEEEEC-C-EEEEECCCCCCceEEEEECCC----------CCEEEEEeCCCCcceeEEEEe-
Confidence 46788999999854 55999987 4 466666665 4999999987 333443332211 11234443
Q ss_pred CCCceEEEEeCCCcEEEEeCCCCCCCCcccceeeeecCCccEeeEEEecCCCcEEEEEeCCCeEEEEEcCCCCCCCCeee
Q 014454 189 FKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQS 268 (424)
Q Consensus 189 ~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~dg~i~i~d~~~~~~~~~~~~ 268 (424)
+..+.+..-.++.+.++|..+.+ .+..+... ..-..++ +++..++++- .++.|.++|..+.+. +..
T Consensus 74 -~~~ly~ltw~~~~v~v~D~~tl~------~~~ti~~~-~~Gwglt--~dg~~L~vSd-gs~~l~~iDp~t~~~---~~~ 139 (243)
T 3mbr_X 74 -RDRLIQLTWRNHEGFVYDLATLT------PRARFRYP-GEGWALT--SDDSHLYMSD-GTAVIRKLDPDTLQQ---VGS 139 (243)
T ss_dssp -TTEEEEEESSSSEEEEEETTTTE------EEEEEECS-SCCCEEE--ECSSCEEEEC-SSSEEEEECTTTCCE---EEE
T ss_pred -CCEEEEEEeeCCEEEEEECCcCc------EEEEEeCC-CCceEEe--eCCCEEEEEC-CCCeEEEEeCCCCeE---EEE
Confidence 45456666678999999997763 33333322 2224444 5677777664 588999999998664 333
Q ss_pred eec--cC---CCeeEEEecCCCCeEEEEEeCCCcEEEEECCCCCCcceEecCC-------------CCCEEEEEEcCCCC
Q 014454 269 VVA--HQ---SEVNCLAFNPFNEWILATGSTDKTVKLFDLRKISTALHTFDSH-------------KEEVFQVGWNPKNE 330 (424)
Q Consensus 269 ~~~--~~---~~v~~v~~~~~~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~~h-------------~~~v~~~~~sp~~~ 330 (424)
+.- +. ..++-+.|. +|. +++..-.+..|.+.|.++ ++.+..+... ..-.+.|+++|.++
T Consensus 140 I~V~~~g~~~~~lNeLe~~-~G~-lyanvw~s~~I~vIDp~t-G~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~ 216 (243)
T 3mbr_X 140 IKVTAGGRPLDNLNELEWV-NGE-LLANVWLTSRIARIDPAS-GKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHD 216 (243)
T ss_dssp EECEETTEECCCEEEEEEE-TTE-EEEEETTTTEEEEECTTT-CBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTT
T ss_pred EEEccCCcccccceeeEEe-CCE-EEEEECCCCeEEEEECCC-CCEEEEEECCcCccccccccCCcCCceEEEEEcCCCC
Confidence 322 21 245566665 354 666665678999999998 6666555421 23568999999988
Q ss_pred cEEEEEE
Q 014454 331 TILASCC 337 (424)
Q Consensus 331 ~~l~s~~ 337 (424)
.+++||-
T Consensus 217 ~lfVTGK 223 (243)
T 3mbr_X 217 RLFVTGK 223 (243)
T ss_dssp EEEEEET
T ss_pred EEEEECC
Confidence 7777764
No 242
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=98.72 E-value=8.8e-05 Score=67.27 Aligned_cols=206 Identities=6% Similarity=-0.023 Sum_probs=134.6
Q ss_pred cCCceeEEEecCCCCcEEEEEeCCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCceeEEEecCCCCceEEEEeCCCcE
Q 014454 124 HDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDDAQI 203 (424)
Q Consensus 124 h~~~v~~~~~~p~~~~~latg~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i 203 (424)
....+..++|.+.+..++.+-...+.|+.++.... .....+........++++.+.+..++++-...+.|
T Consensus 71 ~~~~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~----------~~~~~~~~~~~~p~glavd~~~g~ly~~d~~~~~I 140 (349)
T 3v64_C 71 NLENAIALDFHHRRELVFWSDVTLDRILRANLNGS----------NVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRI 140 (349)
T ss_dssp SCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSC----------SCEEEECSSCSCCCEEEEETTTTEEEEEETTTTEE
T ss_pred CCCceEEEEEeccccEEEEEeccCCceEEEecCCC----------CceEEEeCCCCCccEEEEecCCCeEEEEcCCCCeE
Confidence 34557899999877667777677889999998761 11222222234457888887666555666667899
Q ss_pred EEEeCCCCCCCCcccceeeeecCCccEeeEEEecCCCcEEEEEeCC-CeEEEEEcCCCCCCCCeeeeeccCCCeeEEEec
Q 014454 204 CLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDD-QYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFN 282 (424)
Q Consensus 204 ~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~d-g~i~i~d~~~~~~~~~~~~~~~~~~~v~~v~~~ 282 (424)
.+.++..... .......-.....++++|.+..++.+-... +.|..+++..... .......-...+.|+++
T Consensus 141 ~~~~~dG~~~------~~l~~~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~dG~~~---~~~~~~~~~~PnGla~d 211 (349)
T 3v64_C 141 EVANLDGAHR------KVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGR---RIIADTHLFWPNGLTID 211 (349)
T ss_dssp EEEETTSCSC------EEEECTTCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSC---EESCCSSCSCEEEEEEE
T ss_pred EEEcCCCCce------EEEEeCCCCCcceEEEecCcCeEEEeccCCCCEEEEEeCCCCCc---EEEEECCCCCcceEEEe
Confidence 9999875421 111222334678999999888888776666 8899998875332 11111223457899999
Q ss_pred CCCCeEEEEEeCCCcEEEEECCCCCCcceEecCCCCCEEEEEEcCCCCcEEEEEECCCeEEEeeCCCCC
Q 014454 283 PFNEWILATGSTDKTVKLFDLRKISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRID 351 (424)
Q Consensus 283 ~~~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~l~s~~~dg~i~iwd~~~~~ 351 (424)
|.+..++++-...+.|..+|+.. ......+...-.....+++. +..++.+-...+.|..++..++.
T Consensus 212 ~~~~~lY~aD~~~~~I~~~~~dG-~~~~~~~~~~~~~P~giav~--~~~ly~td~~~~~V~~~~~~~G~ 277 (349)
T 3v64_C 212 YAGRRMYWVDAKHHVIERANLDG-SHRKAVISQGLPHPFAITVF--EDSLYWTDWHTKSINSANKFTGK 277 (349)
T ss_dssp TTTTEEEEEETTTTEEEEEETTS-CSCEEEECSSCSSEEEEEEE--TTEEEEEETTTTEEEEEETTTCC
T ss_pred CCCCEEEEEECCCCEEEEEeCCC-CceEEEEeCCCCCceEEEEE--CCEEEEecCCCCeEEEEEccCCC
Confidence 98887777766778999999875 22222233334566788884 33567777778888888855544
No 243
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=98.71 E-value=0.0001 Score=68.10 Aligned_cols=230 Identities=9% Similarity=-0.024 Sum_probs=142.1
Q ss_pred CCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCceeEEEecCCCCceEEEEeCCCcEEEEeCCCCCCCCcccceeeeecC
Q 014454 147 SAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVH 226 (424)
Q Consensus 147 dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~ 226 (424)
...|+..++.. .....+......+.+|+|++.+..++.+-...+.|..+++....... .........
T Consensus 91 ~~~I~~i~l~~-----------~~~~~~~~~~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~--~~~~~~~~~ 157 (400)
T 3p5b_L 91 RHEVRKMTLDR-----------SEYTSLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVS--SYDTVISRD 157 (400)
T ss_dssp TTEEEEECTTS-----------CSCEEEECSCSCEEEEEEETTTTEEEEEETTTTEEEEEEC------C--CCEEEECSS
T ss_pred cceeEEEccCC-----------cceeEeccccCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCC--cceEEEeCC
Confidence 46888888876 12233444556788999998766445555567889999886532100 011122223
Q ss_pred CccEeeEEEecCCCcEEEEEeCCCeEEEEEcCCCCCCCCeeeeeccCCCeeEEEecCCCCeEEEEEeC-CCcEEEEECCC
Q 014454 227 EGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATGST-DKTVKLFDLRK 305 (424)
Q Consensus 227 ~~~v~~~~~~~~~~~~~~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~l~tg~~-dg~i~iwd~~~ 305 (424)
......+++.+.+..++.+-...+.|.+.++..... ...+...-.....|+++|.+.+++++-.. .+.|...++..
T Consensus 158 ~~~p~glavD~~~~~lY~~d~~~~~I~~~~~~g~~~---~~l~~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG 234 (400)
T 3p5b_L 158 IQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKR---KTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNG 234 (400)
T ss_dssp CSCEEEEEEETTTTEEEEEETTTTEEEEECTTTCSE---EEEEECSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTS
T ss_pred CCCcccEEEEecCCceEEEECCCCeEEEEeCCCCce---EEEEeCCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCC
Confidence 356788999987777887877889999999876431 22222334557899999987766666533 47888888874
Q ss_pred CCCcceEecCCCCCEEEEEEcCCCCcEEEEEECCCeEEEeeCCCCCcccCCCCcCCCCCeeeEEEcCCCCCcceEEeCCC
Q 014454 306 ISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPEDAEDGPPELLFIHGGHTSKISDFSWNPC 385 (424)
Q Consensus 306 ~~~~~~~~~~h~~~v~~~~~sp~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~ 385 (424)
..........-.....|++++.+..++++-...+.|..+|+..... ..+....+......++++.
T Consensus 235 -~~~~~~~~~~l~~P~glavd~~~~~lY~aD~~~~~I~~~d~dG~~~------------~~~~~~~~~l~~P~gl~v~-- 299 (400)
T 3p5b_L 235 -VDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNR------------KTILEDEKRLAHPFSLAVF-- 299 (400)
T ss_dssp -CSCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCC------------EEEEECSSTTSSEEEEEEE--
T ss_pred -CccEEEEECCCCceEEEEEEeCCCEEEEEECCCCEEEEEeCCCCcc------------EEEEeCCCCCCCCEEEEEe--
Confidence 2222222333357899999998876666666678899999864221 2222211222334566663
Q ss_pred CCcEEEEEeCCCcEEEEecCCc
Q 014454 386 EDWVISSVAEDNILQIWQMAEN 407 (424)
Q Consensus 386 ~~~~l~s~~~dg~i~vw~~~~~ 407 (424)
+..++.+-...+.|..++..++
T Consensus 300 ~~~lywtd~~~~~V~~~~~~~G 321 (400)
T 3p5b_L 300 EDKVFWTDIINEAIFSANRLTG 321 (400)
T ss_dssp TTEEEEEESSSCSEEEEESSSC
T ss_pred CCEEEEecCCCCeEEEEEcCCC
Confidence 3346777777778888875444
No 244
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.69 E-value=4.4e-05 Score=70.32 Aligned_cols=206 Identities=6% Similarity=-0.024 Sum_probs=134.4
Q ss_pred cCCceeEEEecCCCCcEEEEEeCCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCceeEEEecCCCCceEEEEeCCCcE
Q 014454 124 HDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDDAQI 203 (424)
Q Consensus 124 h~~~v~~~~~~p~~~~~latg~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i 203 (424)
....+..++|.+.+..++.+-...+.|+.++... ......+........++++.+.+..++++-...+.|
T Consensus 114 ~~~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g----------~~~~~~~~~~~~~p~glavd~~~g~lY~~d~~~~~I 183 (386)
T 3v65_B 114 NLENAIALDFHHRRELVFWSDVTLDRILRANLNG----------SNVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRI 183 (386)
T ss_dssp SCSCEEEEEEETTTTEEEEEETTTTEEEEEETTS----------CCEEEEECSSCSCCCCEEEETTTTEEEEEETTTTEE
T ss_pred CCCccEEEEEecCCCeEEEEeCCCCcEEEEecCC----------CCcEEEEeCCCCCccEEEEEeCCCeEEEEcCCCCeE
Confidence 3456788999987766777777788999999876 111122222233456788887666555665667788
Q ss_pred EEEeCCCCCCCCcccceeeeecCCccEeeEEEecCCCcEEEEEeCC-CeEEEEEcCCCCCCCCeeeeeccCCCeeEEEec
Q 014454 204 CLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDD-QYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFN 282 (424)
Q Consensus 204 ~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~d-g~i~i~d~~~~~~~~~~~~~~~~~~~v~~v~~~ 282 (424)
.+.++..... .......-.....++++|.+..++.+-... +.|..+++..... .......-...+.|+++
T Consensus 184 ~~~~~dg~~~------~~l~~~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~---~~~~~~~~~~PnGlavd 254 (386)
T 3v65_B 184 EVANLDGAHR------KVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGR---RIIADTHLFWPNGLTID 254 (386)
T ss_dssp EECBTTSCSC------EEEECSSCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSC---EEEECSSCSCEEEEEEE
T ss_pred EEEeCCCCce------EEeecCCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCCCc---EEEEECCCCCeeeEEEe
Confidence 8888864321 111222235678999999888888776666 7899888875432 22222233457899999
Q ss_pred CCCCeEEEEEeCCCcEEEEECCCCCCcceEecCCCCCEEEEEEcCCCCcEEEEEECCCeEEEeeCCCCC
Q 014454 283 PFNEWILATGSTDKTVKLFDLRKISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRID 351 (424)
Q Consensus 283 ~~~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~l~s~~~dg~i~iwd~~~~~ 351 (424)
|.+..++++-...+.|..+|+.. ......+.........+++.. ..++.+....+.|..++..++.
T Consensus 255 ~~~~~lY~aD~~~~~I~~~d~dG-~~~~~~~~~~~~~P~giav~~--~~ly~td~~~~~V~~~~~~~G~ 320 (386)
T 3v65_B 255 YAGRRMYWVDAKHHVIERANLDG-SHRKAVISQGLPHPFAITVFE--DSLYWTDWHTKSINSANKFTGK 320 (386)
T ss_dssp GGGTEEEEEETTTTEEEEECTTS-CSCEEEECSSCSSEEEEEEET--TEEEEEETTTTEEEEEETTTCC
T ss_pred CCCCEEEEEECCCCEEEEEeCCC-CeeEEEEECCCCCceEEEEEC--CEEEEeeCCCCeEEEEECCCCc
Confidence 88887777777778999999875 232223333345667888833 3577777778889888865544
No 245
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=98.66 E-value=6.7e-05 Score=66.67 Aligned_cols=243 Identities=7% Similarity=0.058 Sum_probs=142.6
Q ss_pred CCcEEEEEEeccCCceeEEEecCCCCcEEEEEeCCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCceeEEEecCCCCc
Q 014454 113 NGKVQIIQQINHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEG 192 (424)
Q Consensus 113 ~~~~~~~~~~~h~~~v~~~~~~p~~~~~latg~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~ 192 (424)
....+++..+.-......++|.+++. ++++-..++.|..|+... ... ........+.++++.+++.
T Consensus 19 ~~~~~~~~~~p~~~~pegia~~~~g~-lyv~d~~~~~I~~~d~~g-----------~~~-~~~~~~~~p~gia~~~dG~- 84 (306)
T 2p4o_A 19 LAPAKIITSFPVNTFLENLASAPDGT-IFVTNHEVGEIVSITPDG-----------NQQ-IHATVEGKVSGLAFTSNGD- 84 (306)
T ss_dssp CCCEEEEEEECTTCCEEEEEECTTSC-EEEEETTTTEEEEECTTC-----------CEE-EEEECSSEEEEEEECTTSC-
T ss_pred CCCceEeEeCCCCCCcceEEECCCCC-EEEEeCCCCeEEEECCCC-----------ceE-EEEeCCCCceeEEEcCCCc-
Confidence 34566777776667788999999876 777766788999998764 111 1222345688999999887
Q ss_pred eEEEEeC-CC-cEEEEeCCCCCCCCcccceeeeecCCccEeeEEEecCCCcEEEEEeCCCeEEEEEcCCCCCCCCeee--
Q 014454 193 HLLSGSD-DA-QICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQS-- 268 (424)
Q Consensus 193 ~l~s~~~-dg-~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~dg~i~i~d~~~~~~~~~~~~-- 268 (424)
++++... ++ .|..++..++.. ..+.... .......++..+. ..++++-..++.|.++|...+.. .+..
T Consensus 85 l~vad~~~~~~~v~~~d~~~g~~----~~~~~~~-~~~~~~g~~~~~~-~~~~v~d~~~g~i~~~d~~~~~~--~v~~~~ 156 (306)
T 2p4o_A 85 LVATGWNADSIPVVSLVKSDGTV----ETLLTLP-DAIFLNGITPLSD-TQYLTADSYRGAIWLIDVVQPSG--SIWLEH 156 (306)
T ss_dssp EEEEEECTTSCEEEEEECTTSCE----EEEEECT-TCSCEEEEEESSS-SEEEEEETTTTEEEEEETTTTEE--EEEEEC
T ss_pred EEEEeccCCcceEEEEcCCCCeE----EEEEeCC-CccccCcccccCC-CcEEEEECCCCeEEEEeCCCCcE--eEEEEC
Confidence 4544433 22 466667655421 1111111 1122344444443 34565555688999999765310 0100
Q ss_pred -------eeccCCCeeEEEecCCCCeEEEEEeCCCcEEEEECCCCCCc--ceEecCCCCCEEEEEEcCCCCcEEEEEECC
Q 014454 269 -------VVAHQSEVNCLAFNPFNEWILATGSTDKTVKLFDLRKISTA--LHTFDSHKEEVFQVGWNPKNETILASCCLG 339 (424)
Q Consensus 269 -------~~~~~~~v~~v~~~~~~~~~l~tg~~dg~i~iwd~~~~~~~--~~~~~~h~~~v~~~~~sp~~~~~l~s~~~d 339 (424)
....-...+.| +|++.+++++-...+.|..||+...+.. ...+.. ......++++++|. ++++....
T Consensus 157 ~~~~~~~~~~~~~~pngi--s~dg~~lyv~d~~~~~I~~~~~~~~g~~~~~~~~~~-~~~P~gi~vd~dG~-l~va~~~~ 232 (306)
T 2p4o_A 157 PMLARSNSESVFPAANGL--KRFGNFLYVSNTEKMLLLRIPVDSTDKPGEPEIFVE-QTNIDDFAFDVEGN-LYGATHIY 232 (306)
T ss_dssp GGGSCSSTTCCSCSEEEE--EEETTEEEEEETTTTEEEEEEBCTTSCBCCCEEEEE-SCCCSSEEEBTTCC-EEEECBTT
T ss_pred CccccccccCCCCcCCCc--CcCCCEEEEEeCCCCEEEEEEeCCCCCCCccEEEec-cCCCCCeEECCCCC-EEEEeCCC
Confidence 00111234455 7778877777777889999998742211 111211 13456789999994 67666667
Q ss_pred CeEEEeeCCCCCcccCCCCcCCCCCeeeEEEcCCCCCcceEEeC---CCCCcEEEEEe
Q 014454 340 RRLMVWDLSRIDEEQTPEDAEDGPPELLFIHGGHTSKISDFSWN---PCEDWVISSVA 394 (424)
Q Consensus 340 g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~---~~~~~~l~s~~ 394 (424)
+.|.+++.. +.. ..+..........++++|. |++..|+++.+
T Consensus 233 ~~V~~~~~~-G~~------------~~~~~~~~~~~~p~~~a~~g~~~d~~~LyVt~~ 277 (306)
T 2p4o_A 233 NSVVRIAPD-RST------------TIIAQAEQGVIGSTAVAFGQTEGDCTAIYVVTN 277 (306)
T ss_dssp CCEEEECTT-CCE------------EEEECGGGTCTTEEEEEECCSTTTTTEEEEEEC
T ss_pred CeEEEECCC-CCE------------EEEeecccccCCceEEEEecccCCCCEEEEECC
Confidence 889999864 210 1111112223457889998 88776666654
No 246
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=98.64 E-value=2.4e-06 Score=84.80 Aligned_cols=236 Identities=9% Similarity=0.080 Sum_probs=138.0
Q ss_pred EEEEEeCCCeEEEEeCCCCCCCCCCCCCCCCcEEEecC-C----CceeEEEecCCCCceEEEEeC------CCcEEEEeC
Q 014454 140 LIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGH-S----TEGYGLSWSKFKEGHLLSGSD------DAQICLWDI 208 (424)
Q Consensus 140 ~latg~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~h-~----~~v~~l~~~~~~~~~l~s~~~------dg~i~iwd~ 208 (424)
.|.+++.++.|..+|..+ .+.+..+..+ . ..+.+--.. .+. .++.++. +|.|+.+|.
T Consensus 130 ~v~v~~~dg~l~alD~~t----------G~~~W~~~~~~~~~~~~~~~~~p~v-~~~-~v~v~~~~~~~~~~g~v~a~D~ 197 (677)
T 1kb0_A 130 KVYVGAWDGRLIALDAAT----------GKEVWHQNTFEGQKGSLTITGAPRV-FKG-KVIIGNGGAEYGVRGYITAYDA 197 (677)
T ss_dssp EEEEECTTSEEEEEETTT----------CCEEEEEETTTTCCSSCBCCSCCEE-ETT-EEEECCBCTTTCCBCEEEEEET
T ss_pred EEEEEcCCCEEEEEECCC----------CCEEeeecCCcCcCcCcccccCcEE-ECC-EEEEEecccccCCCCEEEEEEC
Confidence 566778899999999877 3444444433 1 111110001 133 4555543 689999999
Q ss_pred CCCCCCCcccceeee-----------------e---------cCCccEeeEEEecCCCcEEEEEeCCC------------
Q 014454 209 NAAPKNKSLEAMQIF-----------------K---------VHEGVVEDVAWHLRHEYLFGSVGDDQ------------ 250 (424)
Q Consensus 209 ~~~~~~~~~~~~~~~-----------------~---------~~~~~v~~~~~~~~~~~~~~s~~~dg------------ 250 (424)
.+++....+...... . +.......+++++++..++ .+..++
T Consensus 198 ~tG~~~W~~~~~~~~~~~~~~~~~~~~g~~~w~~~g~~~~~~~g~~~w~~~~~d~~~~~vy-~~~~~~~~w~~~~~~~~~ 276 (677)
T 1kb0_A 198 ETGERKWRWFSVPGDPSKPFEDESMKRAARTWDPSGKWWEAGGGGTMWDSMTFDAELNTMY-VGTGNGSPWSHKVRSPKG 276 (677)
T ss_dssp TTCCEEEEEESSCCCTTSCCSSHHHHHHHTTSCGGGCHHHHCEECCCCSCEEEETTTTEEE-EECCCEESSCHHHHSTTC
T ss_pred CCCcEEEEeccCCCCccccccccccccccccccccCceeEeCCCcccccceeEcCCCCEEE-EECCCCccccCCCCCccC
Confidence 988653322110000 0 1111224678888877554 555543
Q ss_pred -------eEEEEEcCCCCCCCCeeeeec--cC-------CCeeEEEecCCCC--eEEEEEeCCCcEEEEECCCCCCcceE
Q 014454 251 -------YLLIWDLRTPSVSKPVQSVVA--HQ-------SEVNCLAFNPFNE--WILATGSTDKTVKLFDLRKISTALHT 312 (424)
Q Consensus 251 -------~i~i~d~~~~~~~~~~~~~~~--~~-------~~v~~v~~~~~~~--~~l~tg~~dg~i~iwd~~~~~~~~~~ 312 (424)
.|..+|.++++. +-.+.. |. .....+....+|+ .+++.++.+|.++++|.++ ++++..
T Consensus 277 gd~~~~~sv~AlD~~TG~~---~W~~~~~~~d~wd~~~~~~p~l~~~~~dG~~~~~l~~~~~~G~l~~lD~~t-G~~l~~ 352 (677)
T 1kb0_A 277 GDNLYLASIVALDPDTGKY---KWHYQETPGDNWDYTSTQPMILADIKIAGKPRKVILHAPKNGFFFVLDRTN-GKFISA 352 (677)
T ss_dssp CCCTTTTEEEEECTTTCCE---EEEEESSTTCCSCCCCCSCCEEEEEEETTEEEEEEEECCTTSEEEEEETTT-CCEEEE
T ss_pred CCCeeeEEEEEEECCCCCE---EEEEecCCCcccccccCCCcEEEecccCCcEeeEEEEECCCCEEEEEECCC-CCEecc
Confidence 599999998874 222221 21 1222233333552 4788999999999999988 566544
Q ss_pred ecCCC-----------CCE------------------------EEEEEcCCCCcEEEEEECC------------------
Q 014454 313 FDSHK-----------EEV------------------------FQVGWNPKNETILASCCLG------------------ 339 (424)
Q Consensus 313 ~~~h~-----------~~v------------------------~~~~~sp~~~~~l~s~~~d------------------ 339 (424)
+.... .++ ..++++|+.. ++++...+
T Consensus 353 ~~~~~~~~~~~~d~~g~~~~~~~~~~~~~~~~~~P~~~G~~~w~~~a~dp~~~-~~yv~~~~~~~~~~~~~~~~~g~~~~ 431 (677)
T 1kb0_A 353 KNFVPVNWASGYDKHGKPIGIAAARDGSKPQDAVPGPYGAHNWHPMSFNPQTG-LVYLPAQNVPVNLMDDKKWEFNQAGP 431 (677)
T ss_dssp EESSCCSSEEEECTTSCEEECGGGGCTTSCEECSSCTTCSSCSSCCEEETTTT-EEEEEEEECCCEEEECTTCCTTCCCT
T ss_pred ccccccCcccccCCCCceeeccccCcCCCccEECcCcccccCCCCceEcCCCC-EEEEeChhcceeeecccccccccccc
Confidence 43211 011 1578899876 45554332
Q ss_pred -------------------------CeEEEeeCCCCCcccCCCCcCCCCCeeeEEEcCCCCCcceEEeCCCCCcEEEEEe
Q 014454 340 -------------------------RRLMVWDLSRIDEEQTPEDAEDGPPELLFIHGGHTSKISDFSWNPCEDWVISSVA 394 (424)
Q Consensus 340 -------------------------g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~ 394 (424)
|.|..||+.++ +.+..+. +...+.+..+...+. +++.++
T Consensus 432 ~~~~~~~~~~~g~~~~~~~~~~~~~g~l~A~D~~tG--------------~~~W~~~-~~~~~~~g~~~~~g~-~v~~g~ 495 (677)
T 1kb0_A 432 GKPQSGTGWNTAKFFNAEPPKSKPFGRLLAWDPVAQ--------------KAAWSVE-HVSPWNGGTLTTAGN-VVFQGT 495 (677)
T ss_dssp TSTTGGGTCCCCEEECSSCCCSCCEEEEEEEETTTT--------------EEEEEEE-ESSSCCCCEEEETTT-EEEEEC
T ss_pred cccccccccccccccccccCCCCCccEEEEEeCCCC--------------cEEeecC-CCCCCcCcceEeCCC-EEEEEC
Confidence 66778887765 3343333 223355555666677 677789
Q ss_pred CCCcEEEEecCCccC
Q 014454 395 EDNILQIWQMAENIY 409 (424)
Q Consensus 395 ~dg~i~vw~~~~~~~ 409 (424)
.||.+++||..++..
T Consensus 496 ~dg~l~a~D~~tG~~ 510 (677)
T 1kb0_A 496 ADGRLVAYHAATGEK 510 (677)
T ss_dssp TTSEEEEEETTTCCE
T ss_pred CCCcEEEEECCCCce
Confidence 999999999998854
No 247
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=98.62 E-value=3.8e-06 Score=75.47 Aligned_cols=175 Identities=11% Similarity=0.028 Sum_probs=113.9
Q ss_pred eEEEEeCCCcEEEEeCCCCCCCCcccceeeeecCCccEeeEEEecCCCcEEEEEeCCCeEEEEEcCCCCCCCCeeeeecc
Q 014454 193 HLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAH 272 (424)
Q Consensus 193 ~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~dg~i~i~d~~~~~~~~~~~~~~~~ 272 (424)
.+..++.++.|..+|.. +.. ..........+.++...+++. ++ .++.++.|..+|.. +.. +......
T Consensus 109 ~l~v~t~~~~l~~~d~~-g~~------~~~~~~~~~~~~~~~~~~~g~-l~-vgt~~~~l~~~d~~-g~~---~~~~~~~ 175 (330)
T 3hxj_A 109 ILYVTSMDGHLYAINTD-GTE------KWRFKTKKAIYATPIVSEDGT-IY-VGSNDNYLYAINPD-GTE---KWRFKTN 175 (330)
T ss_dssp EEEEECTTSEEEEECTT-SCE------EEEEECSSCCCSCCEECTTSC-EE-EECTTSEEEEECTT-SCE---EEEEECS
T ss_pred EEEEEecCCEEEEEcCC-CCE------EEEEcCCCceeeeeEEcCCCE-EE-EEcCCCEEEEECCC-CCE---eEEEecC
Confidence 58888889999999987 422 222223344566677766664 44 67778999999988 542 3344444
Q ss_pred CCCeeEEEecCCCCeEEEEEeCCCcEEEEECCCCCCcceEecCCCCCEEEEEEcCCCCcEEEEEECCCeEEEeeCCCCCc
Q 014454 273 QSEVNCLAFNPFNEWILATGSTDKTVKLFDLRKISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDE 352 (424)
Q Consensus 273 ~~~v~~v~~~~~~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~l~s~~~dg~i~iwd~~~~~~ 352 (424)
...+.++...+++. +..++ +.|..+| .+ +..+..+......+.++...+++. |..++.++.|..++...
T Consensus 176 ~~~~~~~~~d~~g~--l~v~t--~~l~~~d-~~-g~~~~~~~~~~~~~~~~~~~~~g~--l~v~t~~~gl~~~~~~g--- 244 (330)
T 3hxj_A 176 DAITSAASIGKDGT--IYFGS--DKVYAIN-PD-GTEKWNFYAGYWTVTRPAISEDGT--IYVTSLDGHLYAINPDG--- 244 (330)
T ss_dssp SCCCSCCEECTTCC--EEEES--SSEEEEC-TT-SCEEEEECCSSCCCSCCEECTTSC--EEEEETTTEEEEECTTS---
T ss_pred CCceeeeEEcCCCE--EEEEe--CEEEEEC-CC-CcEEEEEccCCcceeceEECCCCe--EEEEcCCCeEEEECCCC---
Confidence 55677788877776 44455 7899999 54 455556665566788899988874 55677777888887432
Q ss_pred ccCCCCcCCCCCeeeEEEcCCCCCcceEEeCCCCCcEEEEEeCCCcEEEEecC
Q 014454 353 EQTPEDAEDGPPELLFIHGGHTSKISDFSWNPCEDWVISSVAEDNILQIWQMA 405 (424)
Q Consensus 353 ~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~vw~~~ 405 (424)
..+.........+..+...+++. |..++.+|.|..++..
T Consensus 245 ------------~~~~~~~~~~~~~~~~~~~~~g~--l~v~t~~ggl~~~d~~ 283 (330)
T 3hxj_A 245 ------------TEKWRFKTGKRIESSPVIGNTDT--IYFGSYDGHLYAINPD 283 (330)
T ss_dssp ------------CEEEEEECSSCCCSCCEECTTSC--EEEECTTCEEEEECTT
T ss_pred ------------CEeEEeeCCCCccccceEcCCCe--EEEecCCCCEEEECCC
Confidence 22333333333445566666666 4556677788888864
No 248
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=98.61 E-value=5.4e-05 Score=64.75 Aligned_cols=206 Identities=10% Similarity=0.109 Sum_probs=130.2
Q ss_pred cCCceeEEEecCCCCcEEEEEeCCCeEEEEeCCCCCCCCCCCCCCCCcEEEe-cCCCceeEEEecCCCCceEEEEeCCCc
Q 014454 124 HDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLR-GHSTEGYGLSWSKFKEGHLLSGSDDAQ 202 (424)
Q Consensus 124 h~~~v~~~~~~p~~~~~latg~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~-~h~~~v~~l~~~~~~~~~l~s~~~dg~ 202 (424)
-.+.+..++|+|++..++|+...++.|...|... .....+. +-....-+|++.+++. ++++.-.++.
T Consensus 25 ~~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~g-----------~v~~~i~l~g~~D~EGIa~~~~g~-~~vs~E~~~~ 92 (255)
T 3qqz_A 25 ITNNISSLTWSAQSNTLFSTINKPAAIVEMTTNG-----------DLIRTIPLDFVKDLETIEYIGDNQ-FVISDERDYA 92 (255)
T ss_dssp CCSCEEEEEEETTTTEEEEEEETTEEEEEEETTC-----------CEEEEEECSSCSSEEEEEECSTTE-EEEEETTTTE
T ss_pred cccCcceeEEeCCCCEEEEEECCCCeEEEEeCCC-----------CEEEEEecCCCCChHHeEEeCCCE-EEEEECCCCc
Confidence 4467999999998777888888888888888763 2233332 1224577888887664 5555556788
Q ss_pred EEEEeCCCCCCCCccccee-ee--ecCCccEeeEEEecCCCcEEEEEeCCCeEEEEEcCCCCCCCCeeeee-------cc
Q 014454 203 ICLWDINAAPKNKSLEAMQ-IF--KVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVV-------AH 272 (424)
Q Consensus 203 i~iwd~~~~~~~~~~~~~~-~~--~~~~~~v~~~~~~~~~~~~~~s~~~dg~i~i~d~~~~~~~~~~~~~~-------~~ 272 (424)
+.++++............. .+ .........|+|+|.+..++++.-.+. ..+|.++.......+.... .+
T Consensus 93 l~~~~v~~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p-~~i~~~~g~~~~~~l~i~~~~~~~~~~~ 171 (255)
T 3qqz_A 93 IYVISLTPNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNP-IEVYKVNGLLSSNELHISKDKALQRQFT 171 (255)
T ss_dssp EEEEEECTTCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSS-EEEEEEESTTCSSCCEEEECHHHHHTCC
T ss_pred EEEEEcCCCCeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCC-ceEEEEcccccCCceeeecchhhccccc
Confidence 9999887654211111111 00 123455789999999887876554443 4444443100001122211 12
Q ss_pred CCCeeEEEecCCCCeEEEEEeCCCcEEEEECCCCCCcceEecCCC---------CCEEEEEEcCCCCcEEEEEECCCeEE
Q 014454 273 QSEVNCLAFNPFNEWILATGSTDKTVKLFDLRKISTALHTFDSHK---------EEVFQVGWNPKNETILASCCLGRRLM 343 (424)
Q Consensus 273 ~~~v~~v~~~~~~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~~h~---------~~v~~~~~sp~~~~~l~s~~~dg~i~ 343 (424)
...+.+++++|....+++.......+.++|... +++..+.... ..--.|+|.++|. ++ ..+..+.++
T Consensus 172 ~~d~S~l~~dp~tg~lliLS~~s~~L~~~d~~g--~~~~~~~L~~g~~~l~~~~~qpEGia~d~~G~-ly-IvsE~n~~y 247 (255)
T 3qqz_A 172 LDDVSGAEFNQQKNTLLVLSHESRALQEVTLVG--EVIGEMSLTKGSRGLSHNIKQAEGVAMDASGN-IY-IVSEPNRFY 247 (255)
T ss_dssp SSCCCEEEEETTTTEEEEEETTTTEEEEECTTC--CEEEEEECSTTGGGCSSCCCSEEEEEECTTCC-EE-EEETTTEEE
T ss_pred cCCceeEEEcCCCCeEEEEECCCCeEEEEcCCC--CEEEEEEcCCccCCcccccCCCCeeEECCCCC-EE-EEcCCceEE
Confidence 346789999999888888888889999999774 4555544322 2568899999995 44 447766666
Q ss_pred Eee
Q 014454 344 VWD 346 (424)
Q Consensus 344 iwd 346 (424)
.|.
T Consensus 248 ~f~ 250 (255)
T 3qqz_A 248 RFT 250 (255)
T ss_dssp EEE
T ss_pred EEE
Confidence 654
No 249
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.59 E-value=4.6e-06 Score=71.02 Aligned_cols=198 Identities=12% Similarity=0.108 Sum_probs=117.7
Q ss_pred cCCCc--eeEEEecCCCCceEEEEeCCC--cEEEEeCCCCCCCCcccceeeeecCCccEeeEEEecCCCcEEEEEeCCCe
Q 014454 176 GHSTE--GYGLSWSKFKEGHLLSGSDDA--QICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQY 251 (424)
Q Consensus 176 ~h~~~--v~~l~~~~~~~~~l~s~~~dg--~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~dg~ 251 (424)
.|... ..+|.|+ ++ .++.+++.+| .|+++|+.+++.... ... ..........+.+..+++..-.++.
T Consensus 38 phd~~~ftqGL~~~-~~-~LyestG~~g~S~v~~vD~~Tgkv~~~------~~l-~~~~FgeGit~~g~~ly~ltw~~~~ 108 (262)
T 3nol_A 38 PHDTKAFTEGFFYR-NG-YFYESTGLNGRSSIRKVDIESGKTLQQ------IEL-GKRYFGEGISDWKDKIVGLTWKNGL 108 (262)
T ss_dssp ECCTTCEEEEEEEE-TT-EEEEEEEETTEEEEEEECTTTCCEEEE------EEC-CTTCCEEEEEEETTEEEEEESSSSE
T ss_pred cCCCCcccceEEEE-CC-EEEEECCCCCCceEEEEECCCCcEEEE------Eec-CCccceeEEEEeCCEEEEEEeeCCE
Confidence 35443 3788998 44 4677777766 899999998854322 221 1222222222345678877778999
Q ss_pred EEEEEcCCCCCCCCeeeeeccCCCeeEEEecCCCCeEEEEEeCCCcEEEEECCCCCCcceEecCC--C---CCEEEEEEc
Q 014454 252 LLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATGSTDKTVKLFDLRKISTALHTFDSH--K---EEVFQVGWN 326 (424)
Q Consensus 252 i~i~d~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~~h--~---~~v~~~~~s 326 (424)
+.+||..+.+. +.++.... .-..++ +++..++++ ..++.|.++|..+ .+.+.++... . ..++.+.|.
T Consensus 109 v~v~D~~t~~~---~~ti~~~~-eG~glt--~dg~~L~~S-dGs~~i~~iDp~T-~~v~~~I~V~~~g~~~~~lNELe~~ 180 (262)
T 3nol_A 109 GFVWNIRNLRQ---VRSFNYDG-EGWGLT--HNDQYLIMS-DGTPVLRFLDPES-LTPVRTITVTAHGEELPELNELEWV 180 (262)
T ss_dssp EEEEETTTCCE---EEEEECSS-CCCCEE--ECSSCEEEC-CSSSEEEEECTTT-CSEEEEEECEETTEECCCEEEEEEE
T ss_pred EEEEECccCcE---EEEEECCC-CceEEe--cCCCEEEEE-CCCCeEEEEcCCC-CeEEEEEEeccCCccccccceeEEE
Confidence 99999998664 55554322 223344 456655554 4477899999988 4555555432 1 345668887
Q ss_pred CCCCcEEEEEECCCeEEEeeCCCCCcccCCCCcCCCCCeeeEEEcCCCCCcceEEeCCCCCcEEEEEe
Q 014454 327 PKNETILASCCLGRRLMVWDLSRIDEEQTPEDAEDGPPELLFIHGGHTSKISDFSWNPCEDWVISSVA 394 (424)
Q Consensus 327 p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~ 394 (424)
+| .+++..-.++.|.+.|..++..........-.+.... ...-....+.++|+|+++.++++|-
T Consensus 181 -~G-~lyan~w~~~~I~vIDp~tG~V~~~Id~~~L~~~~~~--~~~~~~vlNGIA~dp~~~~lfVTGK 244 (262)
T 3nol_A 181 -DG-EIFANVWQTNKIVRIDPETGKVTGIIDLNGILAEAGP--LPSPIDVLNGIAWDKEHHRLFVTGK 244 (262)
T ss_dssp -TT-EEEEEETTSSEEEEECTTTCBEEEEEECTTGGGGSCS--CCSSCCCEEEEEEETTTTEEEEEET
T ss_pred -CC-EEEEEEccCCeEEEEECCCCcEEEEEECCcCcccccc--ccCcCCceEEEEEcCCCCEEEEECC
Confidence 56 4666665688999999988754322211100000000 0011234688999999886666653
No 250
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=98.59 E-value=1.3e-05 Score=79.77 Aligned_cols=237 Identities=7% Similarity=0.046 Sum_probs=134.1
Q ss_pred EEEEEeCCCeEEEEeCCCCCCCCCCCCCCCCcEEEecC--CCceeEEEecC--CCCceEEEEe------CCCcEEEEeCC
Q 014454 140 LIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGH--STEGYGLSWSK--FKEGHLLSGS------DDAQICLWDIN 209 (424)
Q Consensus 140 ~latg~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~h--~~~v~~l~~~~--~~~~~l~s~~------~dg~i~iwd~~ 209 (424)
.|++++.|+.|+.+|..+ .+.+...... ......+..+| .+. .++.++ .+|.|..||..
T Consensus 123 ~v~v~~~dg~l~AlDa~T----------G~~~W~~~~~~~~~~~~~~~~sP~v~~g-~v~vg~~~~~~~~~g~v~a~D~~ 191 (689)
T 1yiq_A 123 KVYVGVLDGRLEAIDAKT----------GQRAWSVDTRADHKRSYTITGAPRVVNG-KVVIGNGGAEFGVRGYVTAYDAE 191 (689)
T ss_dssp EEEEECTTSEEEEEETTT----------CCEEEEEECCSCTTSCCBCCSCCEEETT-EEEECCBCTTTCCBCEEEEEETT
T ss_pred EEEEEccCCEEEEEECCC----------CCEeeeecCcCCCCCCccccCCcEEECC-EEEEEeCCCccCCCCEEEEEECC
Confidence 577788899999999977 3334443321 11111111112 122 355543 36899999999
Q ss_pred CCCCCCccccee-----e------------ee--------cCCccEeeEEEecCCCcEEEEEeCCC--------------
Q 014454 210 AAPKNKSLEAMQ-----I------------FK--------VHEGVVEDVAWHLRHEYLFGSVGDDQ-------------- 250 (424)
Q Consensus 210 ~~~~~~~~~~~~-----~------------~~--------~~~~~v~~~~~~~~~~~~~~s~~~dg-------------- 250 (424)
+++......... . +. ++......++++|.... ++.+..++
T Consensus 192 tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~w~~~~~g~~~w~~~~~d~~~~~-vy~~~~~g~~w~~~~~~~~~gd 270 (689)
T 1yiq_A 192 TGKEAWRFYTVPGDPKLPPEGKGMEIAAKTWFGDAYVEQGGGGTAWDSFAYDPELNL-LYIGVGNGSLWDPKWRSQAKGD 270 (689)
T ss_dssp TCCEEEEEESSCCCTTSCCCSHHHHHHHTTCCSSTHHHHCEECCCCSCEEEETTTTE-EEEECCCEESSCHHHHHTTCSC
T ss_pred CCcEEEEecccCCCcccccccccccccccccCCceeeecCCCCccccceeEcCCCCE-EEEeCCCCCccccCCCCCCCCC
Confidence 886533221100 0 00 11111235788887764 45676665
Q ss_pred -----eEEEEEcCCCCCCCCeeeeec--cC-------CCeeEEEecCCCC--eEEEEEeCCCcEEEEECCCCCCcceEec
Q 014454 251 -----YLLIWDLRTPSVSKPVQSVVA--HQ-------SEVNCLAFNPFNE--WILATGSTDKTVKLFDLRKISTALHTFD 314 (424)
Q Consensus 251 -----~i~i~d~~~~~~~~~~~~~~~--~~-------~~v~~v~~~~~~~--~~l~tg~~dg~i~iwd~~~~~~~~~~~~ 314 (424)
.|..+|.++++. +-.+.. |. .++.......+|. .+++.++.+|.++++|.++ ++++....
T Consensus 271 ~~y~~~v~AlD~~TG~~---~W~~~~~~~d~wd~~~~~~~~l~d~~~~G~~~~~v~~~~~~G~l~~lD~~t-G~~l~~~~ 346 (689)
T 1yiq_A 271 NLFLSSIVAVNADTGEY---VWHYQTTPGDAWDYTATQHMILAELPIDGKPRKVLMQAPKNGFFYVIDRAT-GELLSAKG 346 (689)
T ss_dssp CTTTTEEEEEETTTCCE---EEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTT-CCEEEEEE
T ss_pred ceeeeeEEEEEccCCce---eEeeecCCcccccccCCCCcEEEeeccCCcEEEEEEEECCCCeEEEEECCC-CCEecccc
Confidence 399999999874 323222 21 1122222222332 3688899999999999988 55542221
Q ss_pred CCC----------------------------C-----------CEEEEEEcCCCCcEEEEEEC-----------------
Q 014454 315 SHK----------------------------E-----------EVFQVGWNPKNETILASCCL----------------- 338 (424)
Q Consensus 315 ~h~----------------------------~-----------~v~~~~~sp~~~~~l~s~~~----------------- 338 (424)
... . .-..++++|+.. ++++...
T Consensus 347 ~~~~~w~~~~~~~~~~pi~~~~~~~~~~~~~~~~~~p~~~Gg~~w~~~a~dp~~~-~~yv~~~~~~~~~~~~~~~~~~~~ 425 (689)
T 1yiq_A 347 IVPQSWTKGMDMKTGRPILDEENAAYWKNGKRNLVTPAFWGAHDWQPMSYNPDTG-LVYIPAHIMSAYYEHIPEAPKRNP 425 (689)
T ss_dssp SSCCSSEEEEETTTTEEEECHHHHCTTTSSSCEEESSCTTCSSCSSCCEEETTTT-EEEEEEEECCEEEECCSSCCCCCS
T ss_pred ccccccccccCccCCCcccchhhccccCCCCeeEeCCCcccccCCCcceECCCCC-EEEEeccccceeeeeccccccccc
Confidence 100 0 012378888875 5555533
Q ss_pred ----------------------------CCeEEEeeCCCCCcccCCCCcCCCCCeeeEEEcCCCCCcceEEeCCCCCcEE
Q 014454 339 ----------------------------GRRLMVWDLSRIDEEQTPEDAEDGPPELLFIHGGHTSKISDFSWNPCEDWVI 390 (424)
Q Consensus 339 ----------------------------dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l 390 (424)
+|.|..||+.++ +.+..+..+. .+....+...+. ++
T Consensus 426 ~~~~~~~g~~~~~~p~~~~~~~~~~~~~~g~l~A~D~~tG--------------~~~W~~~~~~-~~~~g~~~tagg-lv 489 (689)
T 1yiq_A 426 FKSMYQLGLRTGMMPEGAEGLLEMAKSWSGKLIAWDPVKQ--------------QAAWEVPYVT-IFNGGTLSTAGN-LV 489 (689)
T ss_dssp CTTSCCCSSEECCCCSSHHHHHHHHTTCEEEEEEEETTTT--------------EEEEEEEESS-SCCCCEEEETTT-EE
T ss_pred cccccccCccccccCcccccCCCCCCCcceeEEEEECCCC--------------CeEeEccCCC-CccCccceECCC-EE
Confidence 255777777664 3344443333 234445555666 78
Q ss_pred EEEeCCCcEEEEecCCccC
Q 014454 391 SSVAEDNILQIWQMAENIY 409 (424)
Q Consensus 391 ~s~~~dg~i~vw~~~~~~~ 409 (424)
+.++.||.|+.||..++..
T Consensus 490 f~gt~dg~l~a~D~~tG~~ 508 (689)
T 1yiq_A 490 FEGSADGRVIAYAADTGEK 508 (689)
T ss_dssp EEECTTSEEEEEETTTCCE
T ss_pred EEECCCCcEEEEECCCCcc
Confidence 8889999999999998854
No 251
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=98.57 E-value=8.5e-05 Score=69.79 Aligned_cols=269 Identities=11% Similarity=0.027 Sum_probs=147.9
Q ss_pred ceeEEEecCC-CCcEEEEEeCCCeEEEEeCCCCCCCCCCCCCCCCcEEEecC----CCceeEEEe-------cCCCCceE
Q 014454 127 EVNRARYMPQ-NPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGH----STEGYGLSW-------SKFKEGHL 194 (424)
Q Consensus 127 ~v~~~~~~p~-~~~~latg~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~h----~~~v~~l~~-------~~~~~~~l 194 (424)
....|+|.|. +.+++++....+.|++.|... ..+..+..- ......|+| ++++.. |
T Consensus 140 ~p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~-----------~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~-l 207 (496)
T 3kya_A 140 DNGRLAFDPLNKDHLYICYDGHKAIQLIDLKN-----------RMLSSPLNINTIPTNRIRSIAFNKKIEGYADEAEY-M 207 (496)
T ss_dssp SEEEEEEETTEEEEEEEEEETEEEEEEEETTT-----------TEEEEEECCTTSSCSBEEEEEECCCBTTTBCTTCE-E
T ss_pred CCCEEEEccCCCCEEEEEECCCCeEEEEECCC-----------CEEEEEEccCccccCCCcEEEEeecccccCCCCCE-E
Confidence 3568999983 555666665557788888776 222333221 235789999 998874 5
Q ss_pred EEEeCCC-------cEEEEeCCCCCCCCcccceeeeecCCccEeeEEEecCCCcEEEEEeCCCeEEEEEcC-------CC
Q 014454 195 LSGSDDA-------QICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLR-------TP 260 (424)
Q Consensus 195 ~s~~~dg-------~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~dg~i~i~d~~-------~~ 260 (424)
+++...+ .|.+++...............+... .....++.+|++..|+++-..++.|..+|+. ++
T Consensus 208 yvad~~~~~~~~~~~V~~i~r~~~G~~~~~~~~~~v~~~-~~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg 286 (496)
T 3kya_A 208 IVAIDYDGKGDESPSVYIIKRNADGTFDDRSDIQLIAAY-KQCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNG 286 (496)
T ss_dssp EEEECCCTTGGGEEEEEEEECCTTSCCSTTSCEEEEEEE-SCCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTT
T ss_pred EEEeCCCCCcccCceEEEEecCCCCceeecccceeeccC-CCceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCc
Confidence 5554433 2666664331111100000111111 2456788999878888888889999999998 54
Q ss_pred CCCCC--------eeee--eccCCCeeEEEecCCCCeEEEEEeCCCcEEEEECCCCCCcc---eEecCC---C-------
Q 014454 261 SVSKP--------VQSV--VAHQSEVNCLAFNPFNEWILATGSTDKTVKLFDLRKISTAL---HTFDSH---K------- 317 (424)
Q Consensus 261 ~~~~~--------~~~~--~~~~~~v~~v~~~~~~~~~l~tg~~dg~i~iwd~~~~~~~~---~~~~~h---~------- 317 (424)
....+ ...+ .......+.|+|+|++..++++-.....|+.+|.......+ ..+-+. .
T Consensus 287 ~~~tp~~~~~~g~~~~l~~~~~~~~p~~ia~~p~G~~lYvaD~~~h~I~kid~dg~~~~~~~~~~~aG~~g~~G~~DG~~ 366 (496)
T 3kya_A 287 GSWDPIVKNNPNTFKQLFTIADPSWEFQIFIHPTGKYAYFGVINNHYFMRSDYDEIKKEFITPYNFVGGYKQSGYRDDVG 366 (496)
T ss_dssp CCCCCBGGGCTTTEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEECCCEEEEEBTTBCCCBCCBG
T ss_pred eeecccccccccccceeEecCCCCCceEEEEcCCCCEEEEEeCCCCEEEEEecCCCcceecccEEecCCCCCCcccCCcc
Confidence 43111 1111 11234468999999998656666667889997654311111 122111 0
Q ss_pred -----CCEE-EEEEc-------CCCCcEEEEEECCCeEEEeeCCCCCcccCCCCc--------------CCCCCeeeEEE
Q 014454 318 -----EEVF-QVGWN-------PKNETILASCCLGRRLMVWDLSRIDEEQTPEDA--------------EDGPPELLFIH 370 (424)
Q Consensus 318 -----~~v~-~~~~s-------p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~--------------~~~~~~~~~~~ 370 (424)
.... .++.. +.+ .++++-....+|+.++. .+ ........ .++.+..
T Consensus 367 ~~a~f~~P~~gv~vd~~~~~~~~~g-~lyVaD~~N~rIr~i~~-~G-~v~TiaG~g~~~~~~~~~~~G~~dG~~~~---- 439 (496)
T 3kya_A 367 TEARMNNPCQGVFVKNPDYTGEEEY-DFYFVDRLNFCVRKVTP-EG-IVSTYAGRGASTSLADGNQWGTDDGDLRE---- 439 (496)
T ss_dssp GGCBCSSEEEEEEEECTTCCSSCCE-EEEEEEGGGTEEEEECT-TC-BEEEEEESCTTHHHHHSCSCCCCCEETTT----
T ss_pred cccccCCCeEEEEEccccccccCCC-eEEEEECCCCEEEEEeC-CC-CEEEEecccccccccCccccccCCCCchh----
Confidence 1234 44554 344 46666667788998883 22 11111000 0000000
Q ss_pred cCCCCCcceEEeCCC-CCcEEEEEeCCCcEEEEecCCccCCCCCCCC
Q 014454 371 GGHTSKISDFSWNPC-EDWVISSVAEDNILQIWQMAENIYHDEDDLP 416 (424)
Q Consensus 371 ~~h~~~v~~~~~~~~-~~~~l~s~~~dg~i~vw~~~~~~~~~~~~~~ 416 (424)
...-....+++++++ +. ++++=..+..|+.+++.......+.+.+
T Consensus 440 ~a~f~~P~gIavd~~~g~-lyVaD~~N~rIrki~~~~~~~~~~~~~~ 485 (496)
T 3kya_A 440 VARFRDVSGLVYDDVKEM-FYVHDQVGHTIRTISMEQEENVAGDENI 485 (496)
T ss_dssp TCCCSSEEEEEEETTTTE-EEEEETTTTEEEEEEECCCC--------
T ss_pred hhhcCCCcEEEEECCCCE-EEEEeCCCCEEEEEECCCCcccccCCCC
Confidence 001123578999997 66 7777778889999999988776654443
No 252
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=98.56 E-value=0.00018 Score=61.45 Aligned_cols=208 Identities=14% Similarity=0.088 Sum_probs=128.7
Q ss_pred EecCCCceeEEEecCCCCceEEEEeCCCcEEEEeCCCCCCCCcccceeeee-cCCccEeeEEEecCCCcEEEEEeCCCeE
Q 014454 174 LRGHSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFK-VHEGVVEDVAWHLRHEYLFGSVGDDQYL 252 (424)
Q Consensus 174 ~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~~s~~~dg~i 252 (424)
+.+-...+.+++|+|++..++++...++.|...|+. +.. ++.+. .-......|++.+++. ++++.-.++.+
T Consensus 22 l~g~~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g~v------~~~i~l~g~~D~EGIa~~~~g~-~~vs~E~~~~l 93 (255)
T 3qqz_A 22 IAGITNNISSLTWSAQSNTLFSTINKPAAIVEMTTN-GDL------IRTIPLDFVKDLETIEYIGDNQ-FVISDERDYAI 93 (255)
T ss_dssp CTTCCSCEEEEEEETTTTEEEEEEETTEEEEEEETT-CCE------EEEEECSSCSSEEEEEECSTTE-EEEEETTTTEE
T ss_pred CCCcccCcceeEEeCCCCEEEEEECCCCeEEEEeCC-CCE------EEEEecCCCCChHHeEEeCCCE-EEEEECCCCcE
Confidence 345556799999999877566678888999999986 422 22221 1125678889888775 44455567889
Q ss_pred EEEEcCCCCCCCCeeeee------ccCCCeeEEEecCCCCeEEEEEeCCC-cEEEEECCCCCCcceEec-------CCCC
Q 014454 253 LIWDLRTPSVSKPVQSVV------AHQSEVNCLAFNPFNEWILATGSTDK-TVKLFDLRKISTALHTFD-------SHKE 318 (424)
Q Consensus 253 ~i~d~~~~~~~~~~~~~~------~~~~~v~~v~~~~~~~~~l~tg~~dg-~i~iwd~~~~~~~~~~~~-------~h~~ 318 (424)
.++++........+.... ........|+|+|.+..++++.-.+. .|..|+-......+..+. .+-.
T Consensus 94 ~~~~v~~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g~~~~~~l~i~~~~~~~~~~~~~ 173 (255)
T 3qqz_A 94 YVISLTPNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNELHISKDKALQRQFTLD 173 (255)
T ss_dssp EEEEECTTCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEESTTCSSCCEEEECHHHHHTCCSS
T ss_pred EEEEcCCCCeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEEcccccCCceeeecchhhccccccC
Confidence 999887654211111111 22445689999999876665554443 455554111111222221 1234
Q ss_pred CEEEEEEcCCCCcEEEEEECCCeEEEeeCCCCCcccCCCCcCCCCCeeeEEEc-CC------CCCcceEEeCCCCCcEEE
Q 014454 319 EVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPEDAEDGPPELLFIHG-GH------TSKISDFSWNPCEDWVIS 391 (424)
Q Consensus 319 ~v~~~~~sp~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~-~h------~~~v~~~~~~~~~~~~l~ 391 (424)
.+.+++++|....+++.......+.++|.... . .....+. +. ...--+++|.++|+ +.+
T Consensus 174 d~S~l~~dp~tg~lliLS~~s~~L~~~d~~g~-~------------~~~~~L~~g~~~l~~~~~qpEGia~d~~G~-lyI 239 (255)
T 3qqz_A 174 DVSGAEFNQQKNTLLVLSHESRALQEVTLVGE-V------------IGEMSLTKGSRGLSHNIKQAEGVAMDASGN-IYI 239 (255)
T ss_dssp CCCEEEEETTTTEEEEEETTTTEEEEECTTCC-E------------EEEEECSTTGGGCSSCCCSEEEEEECTTCC-EEE
T ss_pred CceeEEEcCCCCeEEEEECCCCeEEEEcCCCC-E------------EEEEEcCCccCCcccccCCCCeeEECCCCC-EEE
Confidence 67899999988778888888888999997642 1 1122222 11 12457899999998 555
Q ss_pred EEeCCCcEEEEec
Q 014454 392 SVAEDNILQIWQM 404 (424)
Q Consensus 392 s~~~dg~i~vw~~ 404 (424)
+ ++-+.++++.-
T Consensus 240 v-sE~n~~y~f~~ 251 (255)
T 3qqz_A 240 V-SEPNRFYRFTP 251 (255)
T ss_dssp E-ETTTEEEEEEC
T ss_pred E-cCCceEEEEEe
Confidence 5 77776666654
No 253
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=98.56 E-value=2.1e-06 Score=81.72 Aligned_cols=212 Identities=10% Similarity=0.018 Sum_probs=132.7
Q ss_pred EeccCCceeEEEe-c-CCCCcEEEEE-----------------eCCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCce
Q 014454 121 QINHDGEVNRARY-M-PQNPFLIATK-----------------TVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEG 181 (424)
Q Consensus 121 ~~~h~~~v~~~~~-~-p~~~~~latg-----------------~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~h~~~v 181 (424)
.+.....+..+++ . |++.++++++ -.++.+.+.|..+ .+...++.--. ..
T Consensus 129 ~ip~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~vtvID~~t----------~~v~~qI~Vgg-~p 197 (595)
T 1fwx_A 129 EIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVFTAVDADK----------WEVAWQVLVSG-NL 197 (595)
T ss_dssp ECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEEEEEEETTT----------TEEEEEEEESS-CC
T ss_pred eCCCCCCCcceeeeecCCCcEEEEecccccccCCCCcccccccccCceEEEEECCC----------CeEEEEEEeCC-Cc
Confidence 5655567888887 4 8887655553 3356888999876 34444444222 45
Q ss_pred eEEEecCCCCceEEEEeCCC--------------------------------------cEEEEeCCCCCCCCcccceeee
Q 014454 182 YGLSWSKFKEGHLLSGSDDA--------------------------------------QICLWDINAAPKNKSLEAMQIF 223 (424)
Q Consensus 182 ~~l~~~~~~~~~l~s~~~dg--------------------------------------~i~iwd~~~~~~~~~~~~~~~~ 223 (424)
..++.+|++. ++++++.+. .|.+.|..+.+. .. .+..+
T Consensus 198 d~~~~spdGk-~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~~V~VID~~~~~~-~~--~~~~I 273 (595)
T 1fwx_A 198 DNCDADYEGK-WAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELNGVKVVDGRKEAS-SL--FTRYI 273 (595)
T ss_dssp CCEEECSSSS-EEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEETTEEEEECSGGGC-CS--SEEEE
T ss_pred cceEECCCCC-EEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeEECcEEEEeCcccCC-ce--eEEEE
Confidence 6788889887 555555432 355666654110 00 01112
Q ss_pred ecCCccEeeEEEecCCCcEEEEEeCCCeEEEEEcCCCCC-----C---CCeeeeeccCCCeeEEEecCCCCeEEEEEeCC
Q 014454 224 KVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSV-----S---KPVQSVVAHQSEVNCLAFNPFNEWILATGSTD 295 (424)
Q Consensus 224 ~~~~~~v~~~~~~~~~~~~~~s~~~dg~i~i~d~~~~~~-----~---~~~~~~~~~~~~v~~v~~~~~~~~~l~tg~~d 295 (424)
. -.....++.++|+|+++++++..+.+|.++|+.+.+. . ..+.....-......++|+|+| ++.++...|
T Consensus 274 p-vg~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~vG~gP~h~aF~~dG-~aY~t~~ld 351 (595)
T 1fwx_A 274 P-IANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPELGLGPLHTAFDGRG-NAYTSLFLD 351 (595)
T ss_dssp E-EESSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCBCCSCEEEEEECTTS-EEEEEETTT
T ss_pred e-cCCCceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEcCCCCCcceEEECCCC-eEEEEEecC
Confidence 1 1235678999999999999988999999999986310 0 0111111234568899999999 778888889
Q ss_pred CcEEEEECCCC---------CCcceEecCCCCCE-----EEEEEcCCCCcEEEEEECC-CeE-----------EEeeCCC
Q 014454 296 KTVKLFDLRKI---------STALHTFDSHKEEV-----FQVGWNPKNETILASCCLG-RRL-----------MVWDLSR 349 (424)
Q Consensus 296 g~i~iwd~~~~---------~~~~~~~~~h~~~v-----~~~~~sp~~~~~l~s~~~d-g~i-----------~iwd~~~ 349 (424)
+.|.+||+... .+.+.++..|-.+- ..+.++|+|++++++.... .++ .++|+..
T Consensus 352 sqV~kwdi~~a~~~~~g~~~~~vi~kidV~yqpGh~~~~~g~t~~~DGk~l~~~Nk~skdr~~~~gp~~~~~~ql~dis~ 431 (595)
T 1fwx_A 352 SQVVKWNIEDAIRAYAGEKVDPIKDKLDVHYQPGHLKTVMGETLDATNDWLVCLSKFSKDRFLNVGPLKPENDQLIDISG 431 (595)
T ss_dssp TEEEEEEHHHHHHHHHTCSCCCEEEEEECSSCEEEEEETTTTSTTCCSSEEEEEESCCTTSSCCCCSSCCEEEEEEECSS
T ss_pred CcEEEEEhhHhhhhhcccccceeEEEeecccccccceeccceEeCCCCCEEEEcCCCCccccccCCCCCCCcceEEEcCC
Confidence 99999998651 34566666654322 2235579998554444332 234 7888854
No 254
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=98.53 E-value=2.3e-05 Score=77.76 Aligned_cols=201 Identities=7% Similarity=0.057 Sum_probs=121.2
Q ss_pred eEEEecCCCCceEEEEeCCC-------------------cEEEEeCCCCCCCCcccceeeeecCC-------ccEeeEEE
Q 014454 182 YGLSWSKFKEGHLLSGSDDA-------------------QICLWDINAAPKNKSLEAMQIFKVHE-------GVVEDVAW 235 (424)
Q Consensus 182 ~~l~~~~~~~~~l~s~~~dg-------------------~i~iwd~~~~~~~~~~~~~~~~~~~~-------~~v~~~~~ 235 (424)
..+++.|.+. +++.+..++ .|..+|..+++....++. ..|. ....-+..
T Consensus 246 ~~~~~d~~~~-~vy~~~~~~~~w~~~~~~~~~gd~~~~~sv~AlD~~TG~~~W~~~~----~~~d~wd~~~~~~p~l~~~ 320 (677)
T 1kb0_A 246 DSMTFDAELN-TMYVGTGNGSPWSHKVRSPKGGDNLYLASIVALDPDTGKYKWHYQE----TPGDNWDYTSTQPMILADI 320 (677)
T ss_dssp SCEEEETTTT-EEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEES----STTCCSCCCCCSCCEEEEE
T ss_pred cceeEcCCCC-EEEEECCCCccccCCCCCccCCCCeeeEEEEEEECCCCCEEEEEec----CCCcccccccCCCcEEEec
Confidence 3567788766 677776554 589999988754322211 1111 11112222
Q ss_pred ecCCC--cEEEEEeCCCeEEEEEcCCCCCCCCeeeeecc-----------CCCe------------------------eE
Q 014454 236 HLRHE--YLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAH-----------QSEV------------------------NC 278 (424)
Q Consensus 236 ~~~~~--~~~~s~~~dg~i~i~d~~~~~~~~~~~~~~~~-----------~~~v------------------------~~ 278 (424)
..+++ .+++.++.+|.|+++|.++++. +...... ..++ ..
T Consensus 321 ~~dG~~~~~l~~~~~~G~l~~lD~~tG~~---l~~~~~~~~~~~~~~d~~g~~~~~~~~~~~~~~~~~~P~~~G~~~w~~ 397 (677)
T 1kb0_A 321 KIAGKPRKVILHAPKNGFFFVLDRTNGKF---ISAKNFVPVNWASGYDKHGKPIGIAAARDGSKPQDAVPGPYGAHNWHP 397 (677)
T ss_dssp EETTEEEEEEEECCTTSEEEEEETTTCCE---EEEEESSCCSSEEEECTTSCEEECGGGGCTTSCEECSSCTTCSSCSSC
T ss_pred ccCCcEeeEEEEECCCCEEEEEECCCCCE---eccccccccCcccccCCCCceeeccccCcCCCccEECcCcccccCCCC
Confidence 23552 4667889999999999999874 2222110 0001 15
Q ss_pred EEecCCCCeEEEEEeC-------------------------------------------CCcEEEEECCCCCCcceEecC
Q 014454 279 LAFNPFNEWILATGST-------------------------------------------DKTVKLFDLRKISTALHTFDS 315 (424)
Q Consensus 279 v~~~~~~~~~l~tg~~-------------------------------------------dg~i~iwd~~~~~~~~~~~~~ 315 (424)
++++|++. ++++... .|.|..||+.+ ++.+-.+..
T Consensus 398 ~a~dp~~~-~~yv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~l~A~D~~t-G~~~W~~~~ 475 (677)
T 1kb0_A 398 MSFNPQTG-LVYLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTGWNTAKFFNAEPPKSKPFGRLLAWDPVA-QKAAWSVEH 475 (677)
T ss_dssp CEEETTTT-EEEEEEEECCCEEEECTTCCTTCCCTTSTTGGGTCCCCEEECSSCCCSCCEEEEEEEETTT-TEEEEEEEE
T ss_pred ceEcCCCC-EEEEeChhcceeeecccccccccccccccccccccccccccccccCCCCCccEEEEEeCCC-CcEEeecCC
Confidence 67888877 4545432 27899999998 566555543
Q ss_pred CCCCEEEEEEcCCCCcEEEEEECCCeEEEeeCCCCCcccCCCCcCCCCCeeeEEEc-CCCCCcceEEeCCCCCcEEEEEe
Q 014454 316 HKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPEDAEDGPPELLFIHG-GHTSKISDFSWNPCEDWVISSVA 394 (424)
Q Consensus 316 h~~~v~~~~~sp~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~-~h~~~v~~~~~~~~~~~~l~s~~ 394 (424)
..++....+...+. +++.++.||.+++||.++++ .+..+. ++.....-+.|..+|+.+++..+
T Consensus 476 -~~~~~~g~~~~~g~-~v~~g~~dg~l~a~D~~tG~--------------~lw~~~~~~~~~~~p~~y~~~G~~~v~~~~ 539 (677)
T 1kb0_A 476 -VSPWNGGTLTTAGN-VVFQGTADGRLVAYHAATGE--------------KLWEAPTGTGVVAAPSTYMVDGRQYVSVAV 539 (677)
T ss_dssp -SSSCCCCEEEETTT-EEEEECTTSEEEEEETTTCC--------------EEEEEECSSCCCSCCEEEEETTEEEEEEEE
T ss_pred -CCCCcCcceEeCCC-EEEEECCCCcEEEEECCCCc--------------eeeeeeCCCCcccCCEEEEeCCEEEEEEec
Confidence 34445555666665 67778999999999999874 344443 33233344667778874444433
Q ss_pred C----------------CCcEEEEecCCcc
Q 014454 395 E----------------DNILQIWQMAENI 408 (424)
Q Consensus 395 ~----------------dg~i~vw~~~~~~ 408 (424)
. .+.+.+|.+....
T Consensus 540 G~~~~~~~~~~~~~~~~~~~l~~f~l~~~a 569 (677)
T 1kb0_A 540 GWGGVYGLAARATERQGPGTVYTFVVGGKA 569 (677)
T ss_dssp CCCHHHHHHCCSCSCCCCCEEEEEEETCBC
T ss_pred cCCccccccccccccCCCCeEEEEeccccc
Confidence 2 4688889887543
No 255
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=98.53 E-value=0.00031 Score=62.69 Aligned_cols=227 Identities=7% Similarity=-0.020 Sum_probs=141.6
Q ss_pred CCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCceeEEEecCCCCceEEEEeCCCcEEEEeCCCCCCCCcccceeeeecC
Q 014454 147 SAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVH 226 (424)
Q Consensus 147 dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~ 226 (424)
...|+..++... ... ...+......+.+++|.+.+..++.+-...+.|..+++....... ......
T Consensus 12 ~~~I~~i~l~~~--------~~~-~~~~~~~~~~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~~-----~~~~~~ 77 (318)
T 3sov_A 12 RRDLRLVDATNG--------KEN-ATIVVGGLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQ-----NVVVSG 77 (318)
T ss_dssp EEEEEEEETTCT--------TSC-CEEEEEEEEEEEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCCC-----EEEEEC
T ss_pred cCeEEEEECCCC--------ceE-EEEEecCCCccEEEEEEeCCCEEEEEECCCCcEEEEEccCCCceE-----EEEcCC
Confidence 467999998762 111 112222233567999998766455565667889999987652211 111122
Q ss_pred CccEeeEEEecCCCcEEEEEeCCCeEEEEEcCCCCCCCCeeeeeccCCCeeEEEecCCCCeEEEEEe-CCCcEEEEECCC
Q 014454 227 EGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATGS-TDKTVKLFDLRK 305 (424)
Q Consensus 227 ~~~v~~~~~~~~~~~~~~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~l~tg~-~dg~i~iwd~~~ 305 (424)
-.....+++.+.+..++.+-...+.|.++++..... .............++++|.+.+++.+-. ..+.|..+++..
T Consensus 78 l~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~---~~l~~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG 154 (318)
T 3sov_A 78 LLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLR---KVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDG 154 (318)
T ss_dssp CSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSC---EEEECSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTS
T ss_pred CCCccEEEEEcCCCeEEEEECCCCEEEEEECCCCcE---EEEEeCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCC
Confidence 245678999987777887777888999999875431 2222233456789999997776565542 357888888764
Q ss_pred CCCcceEe-cCCCCCEEEEEEcCCCCcEEEEEECCCeEEEeeCCCCCcccCCCCcCCCCCeeeEEEcCCCCCcceEEeCC
Q 014454 306 ISTALHTF-DSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPEDAEDGPPELLFIHGGHTSKISDFSWNP 384 (424)
Q Consensus 306 ~~~~~~~~-~~h~~~v~~~~~sp~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~ 384 (424)
.....+ ...-...+.|+++|++..++.+-+..+.|..+|+..... ..+. .+......++++..
T Consensus 155 --~~~~~~~~~~l~~Pnglavd~~~~~lY~aD~~~~~I~~~d~dG~~~------------~~~~--~~~~~~P~glav~~ 218 (318)
T 3sov_A 155 --SSRFIIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNR------------QAVV--KGSLPHPFALTLFE 218 (318)
T ss_dssp --CSCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC------------EEEE--CSCCSCEEEEEEET
T ss_pred --CCeEEEEECCCCCccEEEEeccCCEEEEEECCCCEEEEEcCCCCce------------EEEe--cCCCCCceEEEEeC
Confidence 222222 222345789999997776777767788899999864211 1111 22233456677643
Q ss_pred CCCcEEEEEeCCCcEEEEecCCcc
Q 014454 385 CEDWVISSVAEDNILQIWQMAENI 408 (424)
Q Consensus 385 ~~~~~l~s~~~dg~i~vw~~~~~~ 408 (424)
..++.+-...+.|..++..++.
T Consensus 219 --~~lywtd~~~~~V~~~~~~~G~ 240 (318)
T 3sov_A 219 --DILYWTDWSTHSILACNKYTGE 240 (318)
T ss_dssp --TEEEEEETTTTEEEEEETTTCC
T ss_pred --CEEEEEecCCCeEEEEECCCCC
Confidence 3367776677888888886553
No 256
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.52 E-value=9.5e-06 Score=69.09 Aligned_cols=193 Identities=10% Similarity=0.035 Sum_probs=117.8
Q ss_pred eeEEEecCCCCceEEEEeCCCcEEEEeCCCCCCCCcccceeeeecCCccEeeEEEecCCCcEEEEEeCCCeEEEEEcCCC
Q 014454 181 GYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTP 260 (424)
Q Consensus 181 v~~l~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~dg~i~i~d~~~~ 260 (424)
..+|.|+. ..++.+.+.+|.|+++|+.+++....+ +.. ...-..+++ .+..+++..-.++.+.+||..+.
T Consensus 57 tqGL~~~~--~~Ly~stG~~g~v~~iD~~Tgkv~~~~-----l~~-~~FgeGit~--~g~~Ly~ltw~~~~v~V~D~~Tl 126 (268)
T 3nok_A 57 TQGLVFHQ--GHFFESTGHQGTLRQLSLESAQPVWME-----RLG-NIFAEGLAS--DGERLYQLTWTEGLLFTWSGMPP 126 (268)
T ss_dssp EEEEEEET--TEEEEEETTTTEEEECCSSCSSCSEEE-----ECT-TCCEEEEEE--CSSCEEEEESSSCEEEEEETTTT
T ss_pred cceEEEEC--CEEEEEcCCCCEEEEEECCCCcEEeEE-----CCC-CcceeEEEE--eCCEEEEEEccCCEEEEEECCcC
Confidence 36888873 447788888899999999988653322 111 111123444 45678877778999999999986
Q ss_pred CCCCCeeeeeccCCCeeEEEecCCCCeEEEEEeCCCcEEEEECCCCCCcceEecC--CC---CCEEEEEEcCCCCcEEEE
Q 014454 261 SVSKPVQSVVAHQSEVNCLAFNPFNEWILATGSTDKTVKLFDLRKISTALHTFDS--HK---EEVFQVGWNPKNETILAS 335 (424)
Q Consensus 261 ~~~~~~~~~~~~~~~v~~v~~~~~~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~~--h~---~~v~~~~~sp~~~~~l~s 335 (424)
+. +.++... ..-..++ +++..++++ ..++.|.++|..+ .+.+.++.. +. ..++.+.|. +| .+++.
T Consensus 127 ~~---~~ti~~~-~eGwGLt--~Dg~~L~vS-dGs~~l~~iDp~T-~~v~~~I~V~~~g~~v~~lNeLe~~-dG-~lyan 196 (268)
T 3nok_A 127 QR---ERTTRYS-GEGWGLC--YWNGKLVRS-DGGTMLTFHEPDG-FALVGAVQVKLRGQPVELINELECA-NG-VIYAN 196 (268)
T ss_dssp EE---EEEEECS-SCCCCEE--EETTEEEEE-CSSSEEEEECTTT-CCEEEEEECEETTEECCCEEEEEEE-TT-EEEEE
T ss_pred cE---EEEEeCC-CceeEEe--cCCCEEEEE-CCCCEEEEEcCCC-CeEEEEEEeCCCCcccccccccEEe-CC-EEEEE
Confidence 64 5554432 2224444 446655544 4588999999988 456665543 22 245778887 56 46666
Q ss_pred EECCCeEEEeeCCCCCcccCCCCcCCCCCeeeEEEcCCCCCcceEEeCCCCCcEEEEEe
Q 014454 336 CCLGRRLMVWDLSRIDEEQTPEDAEDGPPELLFIHGGHTSKISDFSWNPCEDWVISSVA 394 (424)
Q Consensus 336 ~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~ 394 (424)
.-.++.|.+.|..++..........-.+ ........-....+.++|+|++..+++||-
T Consensus 197 vw~s~~I~vIDp~TG~V~~~Idl~~L~~-~~~~~~~~~~~vlNGIA~dp~~~rlfVTGK 254 (268)
T 3nok_A 197 IWHSSDVLEIDPATGTVVGVIDASALTR-AVAGQVTNPEAVLNGIAVEPGSGRIFMTGK 254 (268)
T ss_dssp ETTCSEEEEECTTTCBEEEEEECHHHHH-HHTTTCCCTTCCEEEEEECTTTCCEEEEET
T ss_pred ECCCCeEEEEeCCCCcEEEEEECCCCcc-cccccccCcCCceEEEEEcCCCCEEEEeCC
Confidence 6568899999998875332211100000 000000011235688999998886777764
No 257
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=98.45 E-value=7.1e-05 Score=74.44 Aligned_cols=82 Identities=7% Similarity=0.012 Sum_probs=53.6
Q ss_pred CCcEEEEECCCCCCcceEecCCCCCEEEEEEcCCCCcEEEEEECCCeEEEeeCCCCCcccCCCCcCCCCCeeeEEEcCC-
Q 014454 295 DKTVKLFDLRKISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPEDAEDGPPELLFIHGGH- 373 (424)
Q Consensus 295 dg~i~iwd~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h- 373 (424)
+|.|+.||+.+ ++.+-.+..+. ++..-.+...+. +++.++.||.++.||.+++ +.+..+...
T Consensus 454 ~g~l~A~D~~t-G~~~W~~~~~~-~~~~g~~~tagg-lvf~gt~dg~l~a~D~~tG--------------~~lw~~~~~~ 516 (689)
T 1yiq_A 454 SGKLIAWDPVK-QQAAWEVPYVT-IFNGGTLSTAGN-LVFEGSADGRVIAYAADTG--------------EKLWEQPAAS 516 (689)
T ss_dssp EEEEEEEETTT-TEEEEEEEESS-SCCCCEEEETTT-EEEEECTTSEEEEEETTTC--------------CEEEEEECSS
T ss_pred ceeEEEEECCC-CCeEeEccCCC-CccCccceECCC-EEEEECCCCcEEEEECCCC--------------ccceeeeCCC
Confidence 37799999998 66666665433 333335555564 7888999999999999987 445444433
Q ss_pred CCCcceEEeCCCCCcEEEEE
Q 014454 374 TSKISDFSWNPCEDWVISSV 393 (424)
Q Consensus 374 ~~~v~~~~~~~~~~~~l~s~ 393 (424)
.....-+.|..+|+..++..
T Consensus 517 ~~~~~p~ty~~~G~qyv~~~ 536 (689)
T 1yiq_A 517 GVMAAPVTYSVDGEQYVTFM 536 (689)
T ss_dssp CCCSCCEEEEETTEEEEEEE
T ss_pred CcccCceEEEECCEEEEEEE
Confidence 22234467778887544443
No 258
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=98.45 E-value=0.00089 Score=61.82 Aligned_cols=213 Identities=8% Similarity=0.032 Sum_probs=133.6
Q ss_pred eccCCceeEEEecCCCCcEEEEEeCCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCceeEEEecCCCCceEEEEeCCC
Q 014454 122 INHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDDA 201 (424)
Q Consensus 122 ~~h~~~v~~~~~~p~~~~~latg~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg 201 (424)
+.....+..|+|.+.+..++.+-...+.|+.+++..... .......+........+|++.+.+..+.++-...+
T Consensus 108 ~~~~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~------~~~~~~~~~~~~~~p~glavD~~~~~lY~~d~~~~ 181 (400)
T 3p5b_L 108 IPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHG------VSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLG 181 (400)
T ss_dssp ECSCSCEEEEEEETTTTEEEEEETTTTEEEEEEC------------CCCEEEECSSCSCEEEEEEETTTTEEEEEETTTT
T ss_pred ccccCcceEEeeeeccCceEEEecCCCeEEEEEcccCCC------CCcceEEEeCCCCCcccEEEEecCCceEEEECCCC
Confidence 344567889999987766777766778999998865110 01112223324456778888876665556656678
Q ss_pred cEEEEeCCCCCCCCcccceeeeecCCccEeeEEEecCCCcEEEEEeC-CCeEEEEEcCCCCCCCCeeeeeccCCCeeEEE
Q 014454 202 QICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGD-DQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLA 280 (424)
Q Consensus 202 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~-dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~v~ 280 (424)
.|.+.+++.... ...+...-.....|+++|.+..++.+-.. .+.|...++..... .......-...+.|+
T Consensus 182 ~I~~~~~~g~~~------~~l~~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~~~---~~~~~~~l~~P~gla 252 (400)
T 3p5b_L 182 TVSVADTKGVKR------KTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDI---YSLVTENIQWPNGIT 252 (400)
T ss_dssp EEEEECTTTCSE------EEEEECSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSCSC---EEEECSSCSCEEEEE
T ss_pred eEEEEeCCCCce------EEEEeCCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCCcc---EEEEECCCCceEEEE
Confidence 899999875421 11122233457899999987777766533 47888888875432 222222335678999
Q ss_pred ecCCCCeEEEEEeCCCcEEEEECCCCCCcceEecC--CCCCEEEEEEcCCCCcEEEEEECCCeEEEeeCCCCCc
Q 014454 281 FNPFNEWILATGSTDKTVKLFDLRKISTALHTFDS--HKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDE 352 (424)
Q Consensus 281 ~~~~~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~~--h~~~v~~~~~sp~~~~~l~s~~~dg~i~iwd~~~~~~ 352 (424)
+++.+..++++-...+.|..+|+.. ......... .-.....++.. +..++.+-...+.|..++..++..
T Consensus 253 vd~~~~~lY~aD~~~~~I~~~d~dG-~~~~~~~~~~~~l~~P~gl~v~--~~~lywtd~~~~~V~~~~~~~G~~ 323 (400)
T 3p5b_L 253 LDLLSGRLYWVDSKLHSISSIDVNG-GNRKTILEDEKRLAHPFSLAVF--EDKVFWTDIINEAIFSANRLTGSD 323 (400)
T ss_dssp EETTTTEEEEEETTTTEEEEEETTS-CCCEEEEECSSTTSSEEEEEEE--TTEEEEEESSSCSEEEEESSSCCC
T ss_pred EEeCCCEEEEEECCCCEEEEEeCCC-CccEEEEeCCCCCCCCEEEEEe--CCEEEEecCCCCeEEEEEcCCCCc
Confidence 9998887777666678999999875 222222221 22345677774 335777777778899888666543
No 259
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=98.44 E-value=0.00044 Score=69.34 Aligned_cols=230 Identities=10% Similarity=-0.020 Sum_probs=138.0
Q ss_pred CCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCceeEEEecCCCCceEEEEeCCCcEEEEeCCCCCCCCcccceeeeecC
Q 014454 147 SAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVH 226 (424)
Q Consensus 147 dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~ 226 (424)
...|+..++.. .....+......+.+|+|.+....++++-...+.|+.+++........ ....+...
T Consensus 403 ~~~Ir~i~l~~-----------~~~~~l~~~~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~--~~~vi~~~ 469 (791)
T 3m0c_C 403 RHEVRKMTLDR-----------SEYTSLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSS--YDTVISRD 469 (791)
T ss_dssp BSSEEEECTTS-----------CCCEEEECSCSSEEEEEEETTTTEEEEEETTTTEEEEEEC----------CEEEECSS
T ss_pred ccceeEeeccC-----------CcceeeecCCCceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcc--eeEEEecC
Confidence 35677777664 122334445567789999986664555656678899998875321001 11222223
Q ss_pred CccEeeEEEecCCCcEEEEEeCCCeEEEEEcCCCCCCCCeeeeeccCCCeeEEEecCCCCeEEEEEeCC-CcEEEEECCC
Q 014454 227 EGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATGSTD-KTVKLFDLRK 305 (424)
Q Consensus 227 ~~~v~~~~~~~~~~~~~~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~l~tg~~d-g~i~iwd~~~ 305 (424)
......|++.+.+.+|+++-...+.|.+.++..... ...+.........|+++|.+.+++++-... +.|...++..
T Consensus 470 l~~P~GLAvD~~~~~LY~tD~~~~~I~v~~ldG~~~---~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG 546 (791)
T 3m0c_C 470 IQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKR---KTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNG 546 (791)
T ss_dssp CSCCCEEEEETTTTEEEEEETTTTEEEEEETTSSSE---EEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTS
T ss_pred CCCcceeeeeecCCcEEEEecCCCeEEEEeCCCCeE---EEEEeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCC
Confidence 356678999988888988888889999999975431 122223345688999999877666665333 7888888874
Q ss_pred CCCcceEecCCCCCEEEEEEcCCCCcEEEEEECCCeEEEeeCCCCCcccCCCCcCCCCCeeeEEEcCCCCCcceEEeCCC
Q 014454 306 ISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPEDAEDGPPELLFIHGGHTSKISDFSWNPC 385 (424)
Q Consensus 306 ~~~~~~~~~~h~~~v~~~~~sp~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~ 385 (424)
......+...-.....|++++.+..|+++-...+.|..+++..... ..+....+.-....+|++.
T Consensus 547 -~~~~~lv~~~l~~P~GLavD~~~~~LYwaD~~~~~I~~~d~dG~~~------------~~v~~~~~~l~~P~glav~-- 611 (791)
T 3m0c_C 547 -VDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNR------------KTILEDEKRLAHPFSLAVF-- 611 (791)
T ss_dssp -CCEEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC------------EEEEECTTTTSSEEEEEEE--
T ss_pred -CceEEEEeCCCCCceEEEEecCCCeEEEEeCCCCcEEEEecCCCce------------EEEecCCCccCCCCEEEEe--
Confidence 2222223333357899999987766666656677899998864321 1111111112233455553
Q ss_pred CCcEEEEEeCCCcEEEEecCCc
Q 014454 386 EDWVISSVAEDNILQIWQMAEN 407 (424)
Q Consensus 386 ~~~~l~s~~~dg~i~vw~~~~~ 407 (424)
+.+++++-...+.|...+..++
T Consensus 612 ~~~lYwtD~~~~~I~~~dk~tG 633 (791)
T 3m0c_C 612 EDKVFWTDIINEAIFSANRLTG 633 (791)
T ss_dssp TTEEEEEETTTTEEEEEETTTC
T ss_pred CCEEEEEECCCCEEEEEeCCCC
Confidence 3346666666677776665444
No 260
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.44 E-value=2.5e-05 Score=65.93 Aligned_cols=197 Identities=11% Similarity=0.094 Sum_probs=117.7
Q ss_pred cCCCc--eeEEEecCCCCceEEEEeCC--CcEEEEeCCCCCCCCcccceeeeecCCccE--eeEEEecCCCcEEEEEeCC
Q 014454 176 GHSTE--GYGLSWSKFKEGHLLSGSDD--AQICLWDINAAPKNKSLEAMQIFKVHEGVV--EDVAWHLRHEYLFGSVGDD 249 (424)
Q Consensus 176 ~h~~~--v~~l~~~~~~~~~l~s~~~d--g~i~iwd~~~~~~~~~~~~~~~~~~~~~~v--~~~~~~~~~~~~~~s~~~d 249 (424)
.|... ..+|.|++ + .++.+.+.. ..|+.+|+.+++.... ... .... ..++. .+..+++..-.+
T Consensus 16 phd~~~ftqGL~~~~-~-~LyestG~~g~S~v~~vD~~tgkv~~~------~~l-~~~~fgeGi~~--~~~~ly~ltw~~ 84 (243)
T 3mbr_X 16 PHDTTAFTEGLFYLR-G-HLYESTGETGRSSVRKVDLETGRILQR------AEV-PPPYFGAGIVA--WRDRLIQLTWRN 84 (243)
T ss_dssp ECCTTCCEEEEEEET-T-EEEEEECCTTSCEEEEEETTTCCEEEE------EEC-CTTCCEEEEEE--ETTEEEEEESSS
T ss_pred CCCCccccccEEEEC-C-EEEEECCCCCCceEEEEECCCCCEEEE------EeC-CCCcceeEEEE--eCCEEEEEEeeC
Confidence 45543 56899986 3 356666665 4899999998754222 221 1122 23343 356788777789
Q ss_pred CeEEEEEcCCCCCCCCeeeeeccCCCeeEEEecCCCCeEEEEEeCCCcEEEEECCCCCCcceEecCCC-----CCEEEEE
Q 014454 250 QYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATGSTDKTVKLFDLRKISTALHTFDSHK-----EEVFQVG 324 (424)
Q Consensus 250 g~i~i~d~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~~h~-----~~v~~~~ 324 (424)
+.+.+||..+.+. +.++... ..-..++ +++..++++ ..++.|.++|..+ .+.+.++.... ..++.+.
T Consensus 85 ~~v~v~D~~tl~~---~~ti~~~-~~Gwglt--~dg~~L~vS-dgs~~l~~iDp~t-~~~~~~I~V~~~g~~~~~lNeLe 156 (243)
T 3mbr_X 85 HEGFVYDLATLTP---RARFRYP-GEGWALT--SDDSHLYMS-DGTAVIRKLDPDT-LQQVGSIKVTAGGRPLDNLNELE 156 (243)
T ss_dssp SEEEEEETTTTEE---EEEEECS-SCCCEEE--ECSSCEEEE-CSSSEEEEECTTT-CCEEEEEECEETTEECCCEEEEE
T ss_pred CEEEEEECCcCcE---EEEEeCC-CCceEEe--eCCCEEEEE-CCCCeEEEEeCCC-CeEEEEEEEccCCcccccceeeE
Confidence 9999999998654 5555432 2234555 446655555 4588999999988 45555555321 3456777
Q ss_pred EcCCCCcEEEEEECCCeEEEeeCCCCCcccCCCCcCCCCCeeeEEEcCCCCCcceEEeCCCCCcEEEEEe
Q 014454 325 WNPKNETILASCCLGRRLMVWDLSRIDEEQTPEDAEDGPPELLFIHGGHTSKISDFSWNPCEDWVISSVA 394 (424)
Q Consensus 325 ~sp~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~ 394 (424)
|. ++ .+++..-.+..|.+.|..++..........-.+.... ....-....++++|+|++..+++||-
T Consensus 157 ~~-~G-~lyanvw~s~~I~vIDp~tG~V~~~idl~~l~~~~~~-~~~~~~~vlNGIA~d~~~~~lfVTGK 223 (243)
T 3mbr_X 157 WV-NG-ELLANVWLTSRIARIDPASGKVVAWIDLQALVPDADA-LTDSTNDVLNGIAFDAEHDRLFVTGK 223 (243)
T ss_dssp EE-TT-EEEEEETTTTEEEEECTTTCBEEEEEECGGGSTTTTS-CCCTTSSCEEEEEEETTTTEEEEEET
T ss_pred Ee-CC-EEEEEECCCCeEEEEECCCCCEEEEEECCcCcccccc-ccCCcCCceEEEEEcCCCCEEEEECC
Confidence 76 45 4666655678899999998754332211100000000 00011235688999998886777764
No 261
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=98.44 E-value=0.00021 Score=71.89 Aligned_cols=199 Identities=8% Similarity=0.092 Sum_probs=112.5
Q ss_pred ceeEEEec-CCCCcEEEEEeCCC----eEEEEeCCCCCCCCCCCCCCCCcEEEecCCCceeEEEecCCCCceEEEEeCC-
Q 014454 127 EVNRARYM-PQNPFLIATKTVSA----EVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDD- 200 (424)
Q Consensus 127 ~v~~~~~~-p~~~~~latg~~dg----~v~iw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~d- 200 (424)
.+...+|| |+|+.++.+...+| .|+++|+.+.. ..... .+.. ...+++|+|+++.++++ ..+
T Consensus 175 ~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~-------~~l~~-~~~~---~~~~~~WspDg~~l~y~-~~d~ 242 (751)
T 2xe4_A 175 DVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPS-------QTIAD-KVSG---TNGEIVWGPDHTSLFYV-TKDE 242 (751)
T ss_dssp EEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTT-------CCCCC-CEEE---ECSCCEECSSTTEEEEE-EECT
T ss_pred EEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCC-------EeCCc-cccC---ceeeEEEecCCCEEEEE-EECC
Confidence 57789999 99985444444333 59999998720 11011 1111 13478999999854444 443
Q ss_pred ----CcEEEEeCCCCCCCCcccceeeee-cCCccEeeEEEecCCCcEEEEEeC--CCeEEEEEcCCCCCCCC-eeee-ec
Q 014454 201 ----AQICLWDINAAPKNKSLEAMQIFK-VHEGVVEDVAWHLRHEYLFGSVGD--DQYLLIWDLRTPSVSKP-VQSV-VA 271 (424)
Q Consensus 201 ----g~i~iwd~~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~~s~~~--dg~i~i~d~~~~~~~~~-~~~~-~~ 271 (424)
..|.++++.++... ....+. ........+.|+|+++.++++... ...|.++|+.++.. .. +..+ ..
T Consensus 243 ~~~~~~v~~~~lgt~~~~----~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~~~-~~~~~~l~~~ 317 (751)
T 2xe4_A 243 TLRENKVWRHVMGKLQSE----DVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKGNA-HNTLEIVRPR 317 (751)
T ss_dssp TCCEEEEEEEETTSCGGG----CEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSCTT-CCCEEESSCC
T ss_pred CCCCCEEEEEECCCCchh----cEEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCCCCC-CceeEEeecC
Confidence 25778888654321 111222 122345678999999987766543 34688889887531 11 0222 22
Q ss_pred cCCCeeEEEecCCCCeEEEEEeCC----CcEEEEECCCCCCcceE-ecCCCC--CEEEEEEcCCCCcEEEEEECCCeEEE
Q 014454 272 HQSEVNCLAFNPFNEWILATGSTD----KTVKLFDLRKISTALHT-FDSHKE--EVFQVGWNPKNETILASCCLGRRLMV 344 (424)
Q Consensus 272 ~~~~v~~v~~~~~~~~~l~tg~~d----g~i~iwd~~~~~~~~~~-~~~h~~--~v~~~~~sp~~~~~l~s~~~dg~i~i 344 (424)
......++.|+. +..+++....+ ..|..+|+.+. ..... +..+.. .+..+.+. +..++++...++..+|
T Consensus 318 ~~~~~~s~~~~~-g~~l~~~t~~~~a~~~~L~~~d~~~~-~~~~~~li~~~~~~~l~~~~~~--~~~lv~~~~~~g~~~l 393 (751)
T 2xe4_A 318 EKGVRYDVQMHG-TSHLVILTNEGGAVNHKLLIAPRGQP-SDWSHVLVDHSEDVFMESIAVR--SNYLVVAGRRAGLTRI 393 (751)
T ss_dssp CTTCCEEEEEET-TTEEEEEECTTTCTTCEEEEEETTST-TCCCCEEECCCSSEEEEEEEEC--SSEEEEEEEETTEEEE
T ss_pred CCCceEEEeeee-CCEEEEEeCCCCCCCcEEEEEcCCCc-ccceeeEECCCCCcEEEEEEEE--CCEEEEEEEeCCEEEE
Confidence 345556666654 55556665544 35777777642 22222 333333 34455554 5567888888886554
Q ss_pred ee
Q 014454 345 WD 346 (424)
Q Consensus 345 wd 346 (424)
|-
T Consensus 394 ~~ 395 (751)
T 2xe4_A 394 WT 395 (751)
T ss_dssp EE
T ss_pred EE
Confidence 43
No 262
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=98.41 E-value=0.00036 Score=62.26 Aligned_cols=185 Identities=8% Similarity=-0.028 Sum_probs=117.0
Q ss_pred CcEEEEeCCCCCCCCcccceeeeecCCccEeeEEEecCCCcEEEEEeCCCeEEEEEcCCCCCC-CCeeeeeccCCCeeEE
Q 014454 201 AQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVS-KPVQSVVAHQSEVNCL 279 (424)
Q Consensus 201 g~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~dg~i~i~d~~~~~~~-~~~~~~~~~~~~v~~v 279 (424)
..|+..|+..... .... .....+..++|++.+..++.+-...+.|..+++...... .....+...-.....+
T Consensus 10 ~~I~~i~~~~~~~------~~~~-~~~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~gl 82 (316)
T 1ijq_A 10 HEVRKMTLDRSEY------TSLI-PNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGL 82 (316)
T ss_dssp SSEEEEETTSCCC------EEEE-CSCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEE
T ss_pred CeEEEEECCCcce------Eehh-cCCCceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCCCCCcCEE
Confidence 5688889876532 1111 234567899999987788878778899999998762100 0111222222456788
Q ss_pred EecCCCCeEEEEEeCCCcEEEEECCCCCCcceEecCCCCCEEEEEEcCCCCcEEEEEECC-CeEEEeeCCCCCcccCCCC
Q 014454 280 AFNPFNEWILATGSTDKTVKLFDLRKISTALHTFDSHKEEVFQVGWNPKNETILASCCLG-RRLMVWDLSRIDEEQTPED 358 (424)
Q Consensus 280 ~~~~~~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~l~s~~~d-g~i~iwd~~~~~~~~~~~~ 358 (424)
++++.+..++++-...+.|.++|+.. ......+...-.....++++|.+..++.+.... +.|...++....
T Consensus 83 avd~~~~~ly~~d~~~~~I~~~~~~g-~~~~~~~~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG~~------- 154 (316)
T 1ijq_A 83 AVDWIHSNIYWTDSVLGTVSVADTKG-VKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVD------- 154 (316)
T ss_dssp EEETTTTEEEEEETTTTEEEEEETTS-SSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCC-------
T ss_pred EEeecCCeEEEEECCCCEEEEEeCCC-CceEEEEECCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCCCCC-------
Confidence 99876776777777788999999874 222222222345778999999776666555443 678888775321
Q ss_pred cCCCCCeeeEEEcCCCCCcceEEeCCCCCcEEEEEeCCCcEEEEecCCc
Q 014454 359 AEDGPPELLFIHGGHTSKISDFSWNPCEDWVISSVAEDNILQIWQMAEN 407 (424)
Q Consensus 359 ~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~ 407 (424)
.... ....-...+.+++++++..++++-+..+.|..+++...
T Consensus 155 ------~~~~-~~~~~~~P~gla~d~~~~~lY~~D~~~~~I~~~d~dg~ 196 (316)
T 1ijq_A 155 ------IYSL-VTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGG 196 (316)
T ss_dssp ------EEEE-ECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSC
T ss_pred ------eEEE-EECCCCCceEEEEeccCCEEEEEECCCCeEEEEecCCC
Confidence 1111 11223456789999887756777667788999998754
No 263
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=98.39 E-value=0.0009 Score=59.64 Aligned_cols=205 Identities=7% Similarity=0.011 Sum_probs=132.4
Q ss_pred ceeEEEecCCCCcEEEEEeCCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCceeEEEecCCCCceEEEEeCCCcEEEE
Q 014454 127 EVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDDAQICLW 206 (424)
Q Consensus 127 ~v~~~~~~p~~~~~latg~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~iw 206 (424)
.+.+++|.+.+..++.+-...+.|+.++.... ......+...-....++++.+.+..++++-...+.|.++
T Consensus 36 ~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~---------~~~~~~~~~~l~~p~glavd~~~g~ly~~d~~~~~I~~~ 106 (318)
T 3sov_A 36 DAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKT---------ESVQNVVVSGLLSPDGLACDWLGEKLYWTDSETNRIEVS 106 (318)
T ss_dssp EEEEEEEEGGGTEEEEEETTTTEEEEEETTSS---------SCCCEEEEECCSCCCEEEEETTTTEEEEEETTTTEEEEE
T ss_pred ccEEEEEEeCCCEEEEEECCCCcEEEEEccCC---------CceEEEEcCCCCCccEEEEEcCCCeEEEEECCCCEEEEE
Confidence 56689999876667777777889999998761 111122232334566788887666555665667899999
Q ss_pred eCCCCCCCCcccceeeeecCCccEeeEEEecCCCcEEEEEe-CCCeEEEEEcCCCCCCCCeeeeeccCCCeeEEEecCCC
Q 014454 207 DINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVG-DDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFN 285 (424)
Q Consensus 207 d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~-~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~v~~~~~~ 285 (424)
++..... .............+++.|.+..++.+-. ..+.|..+++..... .......-...+.|++++++
T Consensus 107 ~~dG~~~------~~l~~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~---~~~~~~~l~~Pnglavd~~~ 177 (318)
T 3sov_A 107 NLDGSLR------KVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSR---FIIINSEIYWPNGLTLDYEE 177 (318)
T ss_dssp ETTSCSC------EEEECSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSCSC---EEEECSSCSCEEEEEEETTT
T ss_pred ECCCCcE------EEEEeCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCCe---EEEEECCCCCccEEEEeccC
Confidence 9865321 1111223356789999998777776653 367888888865331 11112223456899999988
Q ss_pred CeEEEEEeCCCcEEEEECCCCCCcceEecCCCCCEEEEEEcCCCCcEEEEEECCCeEEEeeCCCCCc
Q 014454 286 EWILATGSTDKTVKLFDLRKISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDE 352 (424)
Q Consensus 286 ~~~l~tg~~dg~i~iwd~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~l~s~~~dg~i~iwd~~~~~~ 352 (424)
..++++=+..+.|..+|+.. ................+++.. ..++.+-...+.|..++..++..
T Consensus 178 ~~lY~aD~~~~~I~~~d~dG-~~~~~~~~~~~~~P~glav~~--~~lywtd~~~~~V~~~~~~~G~~ 241 (318)
T 3sov_A 178 QKLYWADAKLNFIHKSNLDG-TNRQAVVKGSLPHPFALTLFE--DILYWTDWSTHSILACNKYTGEG 241 (318)
T ss_dssp TEEEEEETTTTEEEEEETTS-CSCEEEECSCCSCEEEEEEET--TEEEEEETTTTEEEEEETTTCCS
T ss_pred CEEEEEECCCCEEEEEcCCC-CceEEEecCCCCCceEEEEeC--CEEEEEecCCCeEEEEECCCCCc
Confidence 87777766778999999874 222222232345567788753 34677766788899999876653
No 264
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=98.36 E-value=0.00031 Score=65.56 Aligned_cols=242 Identities=7% Similarity=0.037 Sum_probs=137.9
Q ss_pred ceeEEEecC-CCCcEEEEEeCCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCceeEEEecCCCCceEEEEeC-CC---
Q 014454 127 EVNRARYMP-QNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSD-DA--- 201 (424)
Q Consensus 127 ~v~~~~~~p-~~~~~latg~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~-dg--- 201 (424)
....|+++| ++..++++ ...+.|+.+|... ..+..+.........|+|++++.. |+.+.. ++
T Consensus 138 ~P~~lavdp~~~g~Lyv~-d~~~~I~~id~~~-----------~~v~~~~~~~~~P~~ia~d~~G~~-lyvad~~~~~~~ 204 (430)
T 3tc9_A 138 GAVWLSFDPKNHNHLYLV-GEQHPTRLIDFEK-----------EYVSTVYSGLSKVRTICWTHEADS-MIITNDQNNNDR 204 (430)
T ss_dssp CCCEEEEETTEEEEEEEE-EBTEEEEEEETTT-----------TEEEEEECCCSCEEEEEECTTSSE-EEEEECCSCTTS
T ss_pred CCCEEEECCCCCCeEEEE-eCCCcEEEEECCC-----------CEEEEEecCCCCcceEEEeCCCCE-EEEEeCCCCccc
Confidence 457889998 34445554 3337888898875 223334444556889999998874 554443 22
Q ss_pred -cEEEEeCCCCCCCCcccceeeeecCCccEeeEEEecCCCcEEEEEeCCCeEEEEEcCCCCCCCCeeeeeccCCCeeEEE
Q 014454 202 -QICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLA 280 (424)
Q Consensus 202 -~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~v~ 280 (424)
.+.+.+.. +... ....+. .......++++|++..++++-..++.|..++...... ..+... ......+.|+
T Consensus 205 ~~v~~~~~~-g~~~----~~~~l~-~~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~-~~~~~~-~~~~~P~gia 276 (430)
T 3tc9_A 205 PNNYILTRE-SGFK----VITELT-KGQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQET-TPLFTI-QDSGWEFHIQ 276 (430)
T ss_dssp EEEEEEEGG-GTSC----SEEEEE-ECSSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEE-EEEEEC-SSSSCCEEEE
T ss_pred ceEEEEeCC-Ccee----eeeeec-cCCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcE-EEEEEc-CCCCcceeEE
Confidence 23334432 2111 011121 1234678889995556777777789999999876431 011111 1123577899
Q ss_pred ecCCCCeEEEEEeCCCcEEEEECCCCCCc---ceEecCC---------------CCCEE-EEEEc--------CCCCcEE
Q 014454 281 FNPFNEWILATGSTDKTVKLFDLRKISTA---LHTFDSH---------------KEEVF-QVGWN--------PKNETIL 333 (424)
Q Consensus 281 ~~~~~~~~l~tg~~dg~i~iwd~~~~~~~---~~~~~~h---------------~~~v~-~~~~s--------p~~~~~l 333 (424)
|+|++.+++++-...+.|..++....... +..+.+. -.... .++.. +++ .++
T Consensus 277 ~~pdG~~lyv~d~~~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~~gv~v~~~~y~~~D~~g-~ly 355 (430)
T 3tc9_A 277 FHPSGNYAYIVVVNQHYILRSDYDWKTKRLTTPYIVCGQQGAKDWVDGVGKKARMHAPRQGTFVKNPAYKGSSDEY-DFY 355 (430)
T ss_dssp ECTTSSEEEEEETTTTEEEEEEEETTTTEECCCEEEEECTTCBCCBCEEGGGCBBSSEEEEEEEECGGGTTSSCCE-EEE
T ss_pred EcCCCCEEEEEECCCCEEEEEeCCcccccccceEEEeccCCCCCCCCCCCcceEeCCCcceEEEccccccccCCCC-eEE
Confidence 99999877777777889999887531111 1122111 01123 45553 234 355
Q ss_pred EEEECCCeEEEeeCCCCCcccCCCCcCCCCCeeeEEEc-------C----------CCCCcceEEeCCCCCcEEEEEeCC
Q 014454 334 ASCCLGRRLMVWDLSRIDEEQTPEDAEDGPPELLFIHG-------G----------HTSKISDFSWNPCEDWVISSVAED 396 (424)
Q Consensus 334 ~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~-------~----------h~~~v~~~~~~~~~~~~l~s~~~d 396 (424)
++-...++|+.++.. + .+..... + .-.....++++|++..++++-..+
T Consensus 356 vaD~~n~~I~~i~~~-G--------------~v~~~~g~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n 420 (430)
T 3tc9_A 356 FCDRENHCIRILTPQ-G--------------RVTTFAGRGSNGTSGYNDGDLRQEARFNHPEGIVYDEERECFFIGDREN 420 (430)
T ss_dssp EEEGGGTEEEEECTT-S--------------EEEEEEECCTTSSSSCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGG
T ss_pred EEECCCcEEEEECCC-C--------------cEEEEEeCCCCCCCcccCCCchhhcEeCCCcEEEEECCCCEEEEEECCC
Confidence 555556778887732 2 1111110 0 012467899999544477777777
Q ss_pred CcEEEEecC
Q 014454 397 NILQIWQMA 405 (424)
Q Consensus 397 g~i~vw~~~ 405 (424)
+.|+..+++
T Consensus 421 ~rIr~i~~e 429 (430)
T 3tc9_A 421 RRIRKIGYE 429 (430)
T ss_dssp TEEEEEEEC
T ss_pred CeEEEEccC
Confidence 888888764
No 265
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=98.34 E-value=0.00047 Score=64.35 Aligned_cols=255 Identities=6% Similarity=-0.030 Sum_probs=139.8
Q ss_pred ceeEEEecCC--CCcEEEEEeCCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCceeEEEecCCCCceEEEEeCC---C
Q 014454 127 EVNRARYMPQ--NPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDD---A 201 (424)
Q Consensus 127 ~v~~~~~~p~--~~~~latg~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~d---g 201 (424)
....|+|.|+ +..++++ ...+.|+.++... ..+..+........+|++++++. ++++.... .
T Consensus 140 ~P~gvavd~~s~~g~Lyv~-D~~~~I~~id~~~-----------g~v~~~~~~~~~P~giavd~dG~-lyVad~~~~~~~ 206 (433)
T 4hw6_A 140 NIWRMMFDPNSNYDDLYWV-GQRDAFRHVDFVN-----------QYVDIKTTNIGQCADVNFTLNGD-MVVVDDQSSDTN 206 (433)
T ss_dssp CCCEEEECTTTTTCEEEEE-CBTSCEEEEETTT-----------TEEEEECCCCSCEEEEEECTTCC-EEEEECCSCTTS
T ss_pred CCceEEEccccCCCEEEEE-eCCCCEEEEECCC-----------CEEEEeecCCCCccEEEECCCCC-EEEEcCCCCccc
Confidence 4668899984 3344444 3338899999854 11233444445688999999887 55554321 1
Q ss_pred c-EEEEeCCCCCCCCcccceeeeecCCccEeeEEEecCCCcEEEEEeCCCeEEEEEcCCCCCCCCeeeeeccCCCeeEEE
Q 014454 202 Q-ICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLA 280 (424)
Q Consensus 202 ~-i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~v~ 280 (424)
. +...+...... . ...+. .......++++|.+..++++-..++.|+.+|..++.....+... ........++
T Consensus 207 ~gv~~~~~~~~~~-~----~~~~~-~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~-~~~~~~~~ia 279 (433)
T 4hw6_A 207 TGIYLFTRASGFT-E----RLSLC-NARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMM-DTKGSNFHIV 279 (433)
T ss_dssp EEEEEECGGGTTC-C----EEEEE-ECSSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEEC-SCCSSCEEEE
T ss_pred ceEEEEECCCCee-c----ccccc-ccCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEecc-CCCCCcccEE
Confidence 1 33333321110 0 01111 23456778999955567766667788999998755420111111 1122234699
Q ss_pred ecCCCCeEEEEEeCCCcEEEEECCCCCCc---ceEecCC---------------CCCEEEEEE---------cCCCCcEE
Q 014454 281 FNPFNEWILATGSTDKTVKLFDLRKISTA---LHTFDSH---------------KEEVFQVGW---------NPKNETIL 333 (424)
Q Consensus 281 ~~~~~~~~l~tg~~dg~i~iwd~~~~~~~---~~~~~~h---------------~~~v~~~~~---------sp~~~~~l 333 (424)
|+|++.+++++-...+.|+.+++...... ...+.+. -.....+++ .+++ .++
T Consensus 280 ~dpdG~~LYvad~~~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~~g-~ly 358 (433)
T 4hw6_A 280 WHPTGDWAYIIYNGKHCIYRVDYNRETGKLAVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEEDEY-DFY 358 (433)
T ss_dssp ECTTSSEEEEEETTTTEEEEEEBCTTTCCBCCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSSCCE-EEE
T ss_pred EeCCCCEEEEEeCCCCEEEEEeCCCCCcccCcEEEEEecCCCCccCCCcccceEEcCCccEEEEccccccccCCCC-cEE
Confidence 99999876777777789999887531111 1122111 123567999 6666 466
Q ss_pred EEEECCCeEEEeeCCCCCcccCCCCcCC-CCCeeeEE-E--cCCCCCcceEEeC-CCCCcEEEEEeCCCcEEEEecC
Q 014454 334 ASCCLGRRLMVWDLSRIDEEQTPEDAED-GPPELLFI-H--GGHTSKISDFSWN-PCEDWVISSVAEDNILQIWQMA 405 (424)
Q Consensus 334 ~s~~~dg~i~iwd~~~~~~~~~~~~~~~-~~~~~~~~-~--~~h~~~v~~~~~~-~~~~~~l~s~~~dg~i~vw~~~ 405 (424)
++-...++|+.++.. +. ......... ...-..-- . ...-.....++++ +++. ++++-..++.|+..+++
T Consensus 359 vaD~~n~~I~~~~~~-G~-v~t~~G~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~-lyVaD~~n~rIr~i~~e 432 (433)
T 4hw6_A 359 FCDRDSHTVRVLTPE-GR-VTTYAGRGNSREWGYVDGELRSQALFNHPTSIAYDMKRKC-FYIGDCDNHRVRKIAPE 432 (433)
T ss_dssp EEETTTTEEEEECTT-SE-EEEEECCCTTCSSCCBCEETTTTCBCSSEEEEEEETTTTE-EEEEEGGGTEEEEEEEC
T ss_pred EEECCCCEEEEECCC-CC-EEEEEeCCCCCccccCCCccccccEeCCCcEEEEECCCCE-EEEEeCCCCEEEEEecC
Confidence 666667889988752 21 110000000 00000000 0 0011235789999 5565 77776777888888764
No 266
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=98.34 E-value=0.0016 Score=59.40 Aligned_cols=221 Identities=9% Similarity=0.025 Sum_probs=125.3
Q ss_pred EEEEEeCCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCceeEEEecCCCCceEEEEeCCCcEEEEeCCCCCCCCcccc
Q 014454 140 LIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEA 219 (424)
Q Consensus 140 ~latg~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~ 219 (424)
.+.+++.++.|..+|..+ .+.................. +. .++.++.++.|..+|..+++.....
T Consensus 105 ~v~v~~~~g~l~a~d~~t----------G~~~W~~~~~~~~~~~p~~~--~~-~v~v~~~~g~l~~~d~~tG~~~W~~-- 169 (376)
T 3q7m_A 105 HVYIGSEKAQVYALNTSD----------GTVAWQTKVAGEALSRPVVS--DG-LVLIHTSNGQLQALNEADGAVKWTV-- 169 (376)
T ss_dssp EEEEEETTSEEEEEETTT----------CCEEEEEECSSCCCSCCEEE--TT-EEEEECTTSEEEEEETTTCCEEEEE--
T ss_pred EEEEEcCCCEEEEEECCC----------CCEEEEEeCCCceEcCCEEE--CC-EEEEEcCCCeEEEEECCCCcEEEEE--
Confidence 566678899999999876 23333333322211112222 33 6888889999999999877532221
Q ss_pred eeeeecCCcc-----EeeEEEecCCCcEEEEEeCCCeEEEEEcCCCCCCCCeeeeeccCC-------CeeEEEecC--CC
Q 014454 220 MQIFKVHEGV-----VEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQS-------EVNCLAFNP--FN 285 (424)
Q Consensus 220 ~~~~~~~~~~-----v~~~~~~~~~~~~~~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~-------~v~~v~~~~--~~ 285 (424)
...... ....... +.. +..++.++.|..+|.++++. +-....... .+..+...| .+
T Consensus 170 ----~~~~~~~~~~~~~~~~~~--~~~-v~~g~~~g~l~~~d~~tG~~---~w~~~~~~~~~~~~~~~~~~~~~~p~~~~ 239 (376)
T 3q7m_A 170 ----NLDMPSLSLRGESAPTTA--FGA-AVVGGDNGRVSAVLMEQGQM---IWQQRISQATGSTEIDRLSDVDTTPVVVN 239 (376)
T ss_dssp ----ECCC-----CCCCCCEEE--TTE-EEECCTTTEEEEEETTTCCE---EEEEECCC-----------CCCCCCEEET
T ss_pred ----eCCCCceeecCCCCcEEE--CCE-EEEEcCCCEEEEEECCCCcE---EEEEecccCCCCcccccccccCCCcEEEC
Confidence 111100 0122222 233 44678899999999988764 222211100 000010111 13
Q ss_pred CeEEEEEeCCCcEEEEECCCCCCcceEecCCCCCEEEEEEcCCCCcEEEEEECCCeEEEeeCCCCCcccCCCCcCCCCCe
Q 014454 286 EWILATGSTDKTVKLFDLRKISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPEDAEDGPPE 365 (424)
Q Consensus 286 ~~~l~tg~~dg~i~iwd~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~ 365 (424)
. .++.++.++.+..+|.++ ++.+..... .....+... +. .++.++.++.|..+|..++.
T Consensus 240 ~-~v~~~~~~g~l~~~d~~t-G~~~w~~~~--~~~~~~~~~--~~-~l~~~~~~g~l~~~d~~tG~-------------- 298 (376)
T 3q7m_A 240 G-VVFALAYNGNLTALDLRS-GQIMWKREL--GSVNDFIVD--GN-RIYLVDQNDRVMALTIDGGV-------------- 298 (376)
T ss_dssp T-EEEEECTTSCEEEEETTT-CCEEEEECC--CCEEEEEEE--TT-EEEEEETTCCEEEEETTTCC--------------
T ss_pred C-EEEEEecCcEEEEEECCC-CcEEeeccC--CCCCCceEE--CC-EEEEEcCCCeEEEEECCCCc--------------
Confidence 3 467778899999999987 555544442 334445443 33 46777888999999998763
Q ss_pred eeEEEc-CCCCCcceEEeCCCCCcEEEEEeCCCcEEEEecCCccC
Q 014454 366 LLFIHG-GHTSKISDFSWNPCEDWVISSVAEDNILQIWQMAENIY 409 (424)
Q Consensus 366 ~~~~~~-~h~~~v~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~ 409 (424)
.+.... .....+...... +. .|+.++.+|.|.++|..++.+
T Consensus 299 ~~w~~~~~~~~~~~~~~~~--~~-~l~v~~~~g~l~~~d~~tG~~ 340 (376)
T 3q7m_A 299 TLWTQSDLLHRLLTSPVLY--NG-NLVVGDSEGYLHWINVEDGRF 340 (376)
T ss_dssp EEEEECTTTTSCCCCCEEE--TT-EEEEECTTSEEEEEETTTCCE
T ss_pred EEEeecccCCCcccCCEEE--CC-EEEEEeCCCeEEEEECCCCcE
Confidence 223222 111222333332 33 467778899999999988764
No 267
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=98.32 E-value=0.002 Score=65.39 Aligned_cols=242 Identities=8% Similarity=0.035 Sum_probs=147.5
Q ss_pred CCceeEEEecCCCCcEEEEEeCCCeEEEEeCCCCCCCCCCCCCCCCcEEEec--------CCCceeEEEecCCCCceEEE
Q 014454 125 DGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRG--------HSTEGYGLSWSKFKEGHLLS 196 (424)
Q Consensus 125 ~~~v~~~~~~p~~~~~latg~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~--------h~~~v~~l~~~~~~~~~l~s 196 (424)
...|.++...+++. |-.|+.++-+.+|+..+. ....+.. ....|.++...+++. |..
T Consensus 214 ~~~i~~i~~d~~g~--lwigt~~~Gl~~~~~~~~-----------~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~--lWi 278 (795)
T 4a2l_A 214 TKQIQAILQQSPTR--IWVATEGAGLFLINPKTK-----------EIKNYLHSPSNPKSISSNYIRSLAMDSQNR--LWI 278 (795)
T ss_dssp CCCEEEEEEEETTE--EEEEEBSSCEEEEETTTT-----------EEEEECCCTTCTTSCSCSBEEEEEECTTSC--EEE
T ss_pred CCeeEEEEEcCCCC--EEEEECCCCeEEEeCCCC-----------eEEEeecCCCCccccCCCeEEEEEEcCCCC--EEE
Confidence 45688888777664 333454444888887651 1111111 135688998887665 555
Q ss_pred EeCCCcEEEEeCCCCCCCCcccceee-----eecCCccEeeEEEecCCCcEEEEEeCCCeEEEEEcCCCCCCCCeeeee-
Q 014454 197 GSDDAQICLWDINAAPKNKSLEAMQI-----FKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVV- 270 (424)
Q Consensus 197 ~~~dg~i~iwd~~~~~~~~~~~~~~~-----~~~~~~~v~~~~~~~~~~~~~~s~~~dg~i~i~d~~~~~~~~~~~~~~- 270 (424)
|+.+ -|.+|+..+... ..... .......|.++...+++. +. .|+.++-|..|+...... ..+.
T Consensus 279 gt~~-Gl~~~~~~~~~~----~~~~~~~~~~~~l~~~~i~~i~~D~~g~-lW-igt~~~Gl~~~~~~~~~~----~~~~~ 347 (795)
T 4a2l_A 279 GTFN-DLNIYHEGTDSF----ASYSSNPVENGSLSQRSVRSIFMDSQGG-MW-LGTYFGGLNYYHPIRNRF----KNIRN 347 (795)
T ss_dssp EESS-CEEEEETTTTEE----EEECCCTTSTTSCSSSCEEEEEECTTSC-EE-EEESSSCEEEECGGGGSS----EEECC
T ss_pred EeCC-hhheEcCCCCeE----EEEecCCCCCCCCCCCcEEEEEEeCCcC-EE-EEECCCCeEEeCCCcccc----eEEcC
Confidence 6655 588888765421 11100 011235799999988875 44 567777899998765431 1111
Q ss_pred ------ccCCCeeEEEecCCCCeEEEEEeCCCcEEEEECCCCCCcceEec---------CCCCCEEEEEEcCCCCcEEEE
Q 014454 271 ------AHQSEVNCLAFNPFNEWILATGSTDKTVKLFDLRKISTALHTFD---------SHKEEVFQVGWNPKNETILAS 335 (424)
Q Consensus 271 ------~~~~~v~~v~~~~~~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~---------~h~~~v~~~~~sp~~~~~l~s 335 (424)
.....|.++..++++. |..|+.++-|..||..+ +. ...+. .....|.++...+++. +|..
T Consensus 348 ~~~~~~l~~~~V~~i~~d~~g~--lWiGt~~~Gl~~~~~~~-~~-~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~-~lWi 422 (795)
T 4a2l_A 348 IPYKNSLSDNVVSCIVEDKDKN--LWIGTNDGGLNLYNPIT-QR-FTSYTLQEDESARGIGSNNIKAVYVDEKKS-LVYI 422 (795)
T ss_dssp CTTSSSCSCSSEEEEEECTTSC--EEEEESSSCEEEECTTT-CC-EEEECCC------CCSCSCEEEEEEETTTT-EEEE
T ss_pred CCCCCCCCCCeeEEEEECCCCC--EEEEECCCCeEEEcCCC-Cc-EEEEecCCCCcccCCCCccEEEEEEcCCCC-EEEE
Confidence 1245699999998876 66788887899999875 22 22222 1235789999988874 3556
Q ss_pred EECCCeEEEeeCCCCCcccCCCCcCCCCCeeeEEEcCCCCCcceEEeCCCCCcEEEEEeCCCcEEEEecCCccCC
Q 014454 336 CCLGRRLMVWDLSRIDEEQTPEDAEDGPPELLFIHGGHTSKISDFSWNPCEDWVISSVAEDNILQIWQMAENIYH 410 (424)
Q Consensus 336 ~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~~ 410 (424)
|+.++-|.+||..++........ .+ ......|.++...+++. +.+.+ .+ -|.+|+..++.+.
T Consensus 423 gt~~~Gl~~~d~~~~~~~~~~~~----~~------~l~~~~v~~i~~d~~g~-lwigt-~~-Gl~~~~~~~~~~~ 484 (795)
T 4a2l_A 423 GTHAGGLSILHRNSGQVENFNQR----NS------QLVNENVYAILPDGEGN-LWLGT-LS-ALVRFNPEQRSFT 484 (795)
T ss_dssp EETTTEEEEEETTTCCEEEECTT----TS------CCSCSCEEEEEECSSSC-EEEEE-SS-CEEEEETTTTEEE
T ss_pred EeCcCceeEEeCCCCcEEEeecC----CC------CcCCCeeEEEEECCCCC-EEEEe-cC-ceeEEeCCCCeEE
Confidence 77767799999876431110000 00 01234688899888888 45544 34 4888998876543
No 268
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=98.32 E-value=0.001 Score=66.75 Aligned_cols=211 Identities=7% Similarity=0.027 Sum_probs=130.7
Q ss_pred cCCceeEEEecCCCCcEEEEEeCCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCceeEEEecCCCCceEEEEeCCCcE
Q 014454 124 HDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDDAQI 203 (424)
Q Consensus 124 h~~~v~~~~~~p~~~~~latg~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i 203 (424)
....+..|+|.+.+..++.+-...+.|+.+++..... .......+........+|++.+.+..++++-...+.|
T Consensus 422 ~~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~------~~~~~~vi~~~l~~P~GLAvD~~~~~LY~tD~~~~~I 495 (791)
T 3m0c_C 422 NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHG------VSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTV 495 (791)
T ss_dssp SCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------------CEEEECSSCSCCCEEEEETTTTEEEEEETTTTEE
T ss_pred CCCceEEEeecccCCeeEEeeccceeEEEEeccCCCC------CcceeEEEecCCCCcceeeeeecCCcEEEEecCCCeE
Confidence 3456778889886666777767778888888865110 0011222332345567888887776566666678899
Q ss_pred EEEeCCCCCCCCcccceeeeecCCccEeeEEEecCCCcEEEEEeCC-CeEEEEEcCCCCCCCCeeeeeccCCCeeEEEec
Q 014454 204 CLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDD-QYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFN 282 (424)
Q Consensus 204 ~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~d-g~i~i~d~~~~~~~~~~~~~~~~~~~v~~v~~~ 282 (424)
.+.++..... ...+...-.....|+++|.+..|+.+-... +.|.+.++..... ...+...-...+.|+++
T Consensus 496 ~v~~ldG~~~------~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~~---~~lv~~~l~~P~GLavD 566 (791)
T 3m0c_C 496 SVADTKGVKR------KTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDI---YSLVTENIQWPNGITLD 566 (791)
T ss_dssp EEEETTSSSE------EEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCE---EEEECSSCSCEEEEEEE
T ss_pred EEEeCCCCeE------EEEEeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCCce---EEEEeCCCCCceEEEEe
Confidence 9999875321 111222334688999999877787665443 7888888875331 12222233568899999
Q ss_pred CCCCeEEEEEeCCCcEEEEECCCCCCcceEecC--CCCCEEEEEEcCCCCcEEEEEECCCeEEEeeCCCCCc
Q 014454 283 PFNEWILATGSTDKTVKLFDLRKISTALHTFDS--HKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDE 352 (424)
Q Consensus 283 ~~~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~~--h~~~v~~~~~sp~~~~~l~s~~~dg~i~iwd~~~~~~ 352 (424)
+.+..|+++=...+.|..+++.. ......+.. .-....+|++.. ..++++-...+.|...+..++..
T Consensus 567 ~~~~~LYwaD~~~~~I~~~d~dG-~~~~~v~~~~~~l~~P~glav~~--~~lYwtD~~~~~I~~~dk~tG~~ 635 (791)
T 3m0c_C 567 LLSGRLYWVDSKLHSISSIDVNG-GNRKTILEDEKRLAHPFSLAVFE--DKVFWTDIINEAIFSANRLTGSD 635 (791)
T ss_dssp TTTTEEEEEETTTTEEEEEETTS-CSCEEEEECTTTTSSEEEEEEET--TEEEEEETTTTEEEEEETTTCCC
T ss_pred cCCCeEEEEeCCCCcEEEEecCC-CceEEEecCCCccCCCCEEEEeC--CEEEEEECCCCEEEEEeCCCCcc
Confidence 88877666666677899999875 222222222 123445666643 35666766778888888766543
No 269
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=98.29 E-value=0.0012 Score=66.97 Aligned_cols=244 Identities=8% Similarity=0.067 Sum_probs=147.4
Q ss_pred CceeEEEecCCCCcEEEEEeCCCeEEEEeCCCCCCCCCCCCCCCCcEEEe--------cCCCceeEEEecCCCCceEEEE
Q 014454 126 GEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLR--------GHSTEGYGLSWSKFKEGHLLSG 197 (424)
Q Consensus 126 ~~v~~~~~~p~~~~~latg~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~--------~h~~~v~~l~~~~~~~~~l~s~ 197 (424)
..|.++...+++. |..|+.. -|.+|+.... ....+. -....|.++...++|. |-.|
T Consensus 263 ~~i~~i~~d~~g~--lWigt~~-Gl~~~~~~~~-----------~~~~~~~~~~~~~~l~~~~i~~i~~D~~g~--lWig 326 (795)
T 4a2l_A 263 NYIRSLAMDSQNR--LWIGTFN-DLNIYHEGTD-----------SFASYSSNPVENGSLSQRSVRSIFMDSQGG--MWLG 326 (795)
T ss_dssp SBEEEEEECTTSC--EEEEESS-CEEEEETTTT-----------EEEEECCCTTSTTSCSSSCEEEEEECTTSC--EEEE
T ss_pred CeEEEEEEcCCCC--EEEEeCC-hhheEcCCCC-----------eEEEEecCCCCCCCCCCCcEEEEEEeCCcC--EEEE
Confidence 5688998888776 3344555 4888887651 111111 1235688998887665 7778
Q ss_pred eCCCcEEEEeCCCCCCCCccccee-eeecCCccEeeEEEecCCCcEEEEEeCCCeEEEEEcCCCCCCCCeeeee------
Q 014454 198 SDDAQICLWDINAAPKNKSLEAMQ-IFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVV------ 270 (424)
Q Consensus 198 ~~dg~i~iwd~~~~~~~~~~~~~~-~~~~~~~~v~~~~~~~~~~~~~~s~~~dg~i~i~d~~~~~~~~~~~~~~------ 270 (424)
+.++-|..|+....... .+.... .-......|.++...+++. +. .|+.++-|..||..++. ...+.
T Consensus 327 t~~~Gl~~~~~~~~~~~-~~~~~~~~~~l~~~~V~~i~~d~~g~-lW-iGt~~~Gl~~~~~~~~~----~~~~~~~~~~~ 399 (795)
T 4a2l_A 327 TYFGGLNYYHPIRNRFK-NIRNIPYKNSLSDNVVSCIVEDKDKN-LW-IGTNDGGLNLYNPITQR----FTSYTLQEDES 399 (795)
T ss_dssp ESSSCEEEECGGGGSSE-EECCCTTSSSCSCSSEEEEEECTTSC-EE-EEESSSCEEEECTTTCC----EEEECCC----
T ss_pred ECCCCeEEeCCCcccce-EEcCCCCCCCCCCCeeEEEEECCCCC-EE-EEECCCCeEEEcCCCCc----EEEEecCCCCc
Confidence 88788889987543210 000000 0001235689999888775 44 57777789999987654 22221
Q ss_pred ---ccCCCeeEEEecCCCCeEEEEEeCCCcEEEEECCCCCCcceEec-----CCCCCEEEEEEcCCCCcEEEEEECCCeE
Q 014454 271 ---AHQSEVNCLAFNPFNEWILATGSTDKTVKLFDLRKISTALHTFD-----SHKEEVFQVGWNPKNETILASCCLGRRL 342 (424)
Q Consensus 271 ---~~~~~v~~v~~~~~~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~-----~h~~~v~~~~~sp~~~~~l~s~~~dg~i 342 (424)
.....|.++...+++. +|..|+.++-|.+||..+ ++ ...+. .+...|.++...+++. +. .|+.+| +
T Consensus 400 ~~~l~~~~v~~i~~d~~g~-~lWigt~~~Gl~~~d~~~-~~-~~~~~~~~~~l~~~~v~~i~~d~~g~-lw-igt~~G-l 473 (795)
T 4a2l_A 400 ARGIGSNNIKAVYVDEKKS-LVYIGTHAGGLSILHRNS-GQ-VENFNQRNSQLVNENVYAILPDGEGN-LW-LGTLSA-L 473 (795)
T ss_dssp --CCSCSCEEEEEEETTTT-EEEEEETTTEEEEEETTT-CC-EEEECTTTSCCSCSCEEEEEECSSSC-EE-EEESSC-E
T ss_pred ccCCCCccEEEEEEcCCCC-EEEEEeCcCceeEEeCCC-Cc-EEEeecCCCCcCCCeeEEEEECCCCC-EE-EEecCc-e
Confidence 1235689999888776 466778777899999876 32 23332 2346799999998885 34 444455 8
Q ss_pred EEeeCCCCCcccCCCCcCCCCCeeeEEEcCCCCCcceEEeCCCCCcEEEEEeCCCcEEEEecCCccC
Q 014454 343 MVWDLSRIDEEQTPEDAEDGPPELLFIHGGHTSKISDFSWNPCEDWVISSVAEDNILQIWQMAENIY 409 (424)
Q Consensus 343 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~ 409 (424)
.+||..+......... ..+ . .-....|.++...+++. +.+.+. . -|..|+..++.+
T Consensus 474 ~~~~~~~~~~~~~~~~--~~~-~-----~~~~~~i~~i~~d~~g~-lWigt~-~-Gl~~~~~~~~~~ 529 (795)
T 4a2l_A 474 VRFNPEQRSFTTIEKE--KDG-T-----PVVSKQITTLFRDSHKR-LWIGGE-E-GLSVFKQEGLDI 529 (795)
T ss_dssp EEEETTTTEEEECCBC--TTC-C-----BCCCCCEEEEEECTTCC-EEEEES-S-CEEEEEEETTEE
T ss_pred eEEeCCCCeEEEcccc--ccc-c-----ccCCceEEEEEECCCCC-EEEEeC-C-ceEEEeCCCCeE
Confidence 8898765421110000 000 0 01234688899999988 455443 4 488888876544
No 270
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=98.29 E-value=1e-05 Score=80.49 Aligned_cols=207 Identities=8% Similarity=-0.023 Sum_probs=122.2
Q ss_pred CceeEEEecCCCCceEEEEeCCCcEEEEeCCCCCCCCcccceeeeecCCccEeeEEEecCCCcEEEEEeCCCeEEEEEcC
Q 014454 179 TEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLR 258 (424)
Q Consensus 179 ~~v~~l~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~dg~i~i~d~~ 258 (424)
..+.+|+|.+.+..++++-...+.|+.+++........ ....+.........|++.+.+..|+++-...+.|.++++.
T Consensus 406 ~~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~--~~~~i~~~~~~P~glavD~~~g~LY~tD~~~~~I~v~d~d 483 (699)
T 1n7d_A 406 RNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSS--YDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTK 483 (699)
T ss_dssp TTCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-CC--CCCBCCSCC--CCCEECCCSSSBCEECCTTTSCEEEEBSS
T ss_pred cceEEEccccccCeEEEEecCCCeEEEEecCCCCCCcc--eEEEEeCCCCCcceEEEEeeCCcEEEEeccCCeEEEEecC
Confidence 45678999987664444444568899999875210000 0011111122456788887666777676677889999987
Q ss_pred CCCCCCCeeee-eccCCCeeEEEecCCCCeEEEEEeCC-CcEEEEECCCCCCcceEe-cCCCCCEEEEEEcCCCCcEEEE
Q 014454 259 TPSVSKPVQSV-VAHQSEVNCLAFNPFNEWILATGSTD-KTVKLFDLRKISTALHTF-DSHKEEVFQVGWNPKNETILAS 335 (424)
Q Consensus 259 ~~~~~~~~~~~-~~~~~~v~~v~~~~~~~~~l~tg~~d-g~i~iwd~~~~~~~~~~~-~~h~~~v~~~~~sp~~~~~l~s 335 (424)
... ...+ .........|+++|.+.+++++-... +.|..+++.. .....+ ...-...+.|+|+|++..++++
T Consensus 484 g~~----~~~l~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG--~~~~~l~~~~l~~PnGlavd~~~~~LY~a 557 (699)
T 1n7d_A 484 GVK----RKTLFREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNG--VDIYSLVTENIQWPNGITLDLLSGRLYWV 557 (699)
T ss_dssp SCC----EEEECCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSS--CCCCEESCSSCSSCCCEEECTTTCCEEEE
T ss_pred CCc----eEEEEeCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCC--CCeeEEEeCCCCCccEEEEeccCCEEEEE
Confidence 543 2222 22234567889999777656554333 6788887764 222222 2223456789999987777777
Q ss_pred EECCCeEEEeeCCCCCcccCCCCcCCCCCeeeEEEcCCCCCcceEEeCCCCCcEEEEEeCCCcEEEEecCCc
Q 014454 336 CCLGRRLMVWDLSRIDEEQTPEDAEDGPPELLFIHGGHTSKISDFSWNPCEDWVISSVAEDNILQIWQMAEN 407 (424)
Q Consensus 336 ~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~ 407 (424)
-+..+.|..+++..... ..+....+......++++..+ +++++....+.|..++..++
T Consensus 558 D~~~~~I~~~d~dG~~~------------~~~~~~~~~~~~P~glavd~~--~lywtd~~~~~V~~~d~~~G 615 (699)
T 1n7d_A 558 DSKLHSISSIDVNGGNR------------KTILEDEKRLAHPFSLAVFED--KVFWTDIINEAIFSANRLTG 615 (699)
T ss_dssp ETTTTEEEEECSSSSCC------------EEECCCSSSCSSCCCCEEETT--EEEEECSTTTCEEEEETTTE
T ss_pred ecCCCeEEEEccCCCce------------EEEEecCCcCCCceEeEEECC--EEEEEeCCCCeEEEEEccCC
Confidence 77788899999864211 111111111223455666543 46777777788888887554
No 271
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=98.28 E-value=0.00017 Score=64.47 Aligned_cols=208 Identities=10% Similarity=0.045 Sum_probs=120.6
Q ss_pred CceeEEEecCCCCceEEEEeCCCcEEEEeCCCCCCCCccccee--------------eeecCCccEeeEEEecCCCcEEE
Q 014454 179 TEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQ--------------IFKVHEGVVEDVAWHLRHEYLFG 244 (424)
Q Consensus 179 ~~v~~l~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~--------------~~~~~~~~v~~~~~~~~~~~~~~ 244 (424)
....+++|.+++. +++++..++.|..|+...... ..+.... ........+..+++.+++..+++
T Consensus 19 ~~p~~i~~d~~g~-~l~v~~~~~~i~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~l~v 96 (322)
T 2fp8_A 19 YAPNSFTFDSTNK-GFYTSVQDGRVIKYEGPNSGF-VDFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQLYI 96 (322)
T ss_dssp SCCCCEECCTTCS-SEEEECTTSEEEEECCTTTCE-EEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTEEEE
T ss_pred CCceEEEEcCCCC-EEEEEcCCCeEEEECCCCCce-EEEecccccccccccccccchhccccCCCCceEEEcCCCCcEEE
Confidence 4466889998765 688888899999998865321 0000000 00001135788999973345654
Q ss_pred EEeCCCeEEEEEcCCCCCCCCeeee-e-ccCCCeeEEEecC-CCCeEEEEEeC-----------------CCcEEEEECC
Q 014454 245 SVGDDQYLLIWDLRTPSVSKPVQSV-V-AHQSEVNCLAFNP-FNEWILATGST-----------------DKTVKLFDLR 304 (424)
Q Consensus 245 s~~~dg~i~i~d~~~~~~~~~~~~~-~-~~~~~v~~v~~~~-~~~~~l~tg~~-----------------dg~i~iwd~~ 304 (424)
+...+.|..+|..++.. ..+... . ......+.+++.+ +|. +.++-.. ++.|..||..
T Consensus 97 -~d~~~~i~~~d~~~g~~-~~~~~~~~~~~~~~p~~i~~d~~~G~-l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~ 173 (322)
T 2fp8_A 97 -VDCYYHLSVVGSEGGHA-TQLATSVDGVPFKWLYAVTVDQRTGI-VYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPS 173 (322)
T ss_dssp -EETTTEEEEECTTCEEC-EEEESEETTEECSCEEEEEECTTTCC-EEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETT
T ss_pred -EECCCCEEEEeCCCCEE-EEecccCCCCcccccceEEEecCCCE-EEEECCcccccccccceehcccCCCceEEEEeCC
Confidence 44445588888765431 111111 0 0123468899999 886 4554322 3678888876
Q ss_pred CCCCcceEecCCCCCEEEEEEcCCCCcEEEEEECCCeEEEeeCCCCCcccCCCCcCCCCCeeeEEEcCCCCCcceEEeCC
Q 014454 305 KISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPEDAEDGPPELLFIHGGHTSKISDFSWNP 384 (424)
Q Consensus 305 ~~~~~~~~~~~h~~~v~~~~~sp~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~ 384 (424)
. +.. ..+...-.....++|+|++..++++-...+.|.+|++..... .....+... .+ ...+++.+
T Consensus 174 ~-~~~-~~~~~~~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~---------~~~~~~~~~---~g-P~gi~~d~ 238 (322)
T 2fp8_A 174 T-KET-TLLLKELHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKK---------GTAEVLVKI---PN-PGNIKRNA 238 (322)
T ss_dssp T-TEE-EEEEEEESCCCEEEECTTSSEEEEEEGGGTEEEEEESSSTTT---------TCEEEEEEC---SS-EEEEEECT
T ss_pred C-CEE-EEeccCCccCcceEECCCCCEEEEEeCCCCeEEEEECCCCcC---------CccceEEeC---CC-CCCeEECC
Confidence 5 222 222111234567999999875566656678999999874210 011222221 22 67899999
Q ss_pred CCCcEEEEEeC----------CCcEEEEecCCc
Q 014454 385 CEDWVISSVAE----------DNILQIWQMAEN 407 (424)
Q Consensus 385 ~~~~~l~s~~~----------dg~i~vw~~~~~ 407 (424)
+|. +.++... .+.|..++....
T Consensus 239 ~G~-l~va~~~~~~~~~~~~~~~~v~~~d~~G~ 270 (322)
T 2fp8_A 239 DGH-FWVSSSEELDGNMHGRVDPKGIKFDEFGN 270 (322)
T ss_dssp TSC-EEEEEEEETTSSTTSCEEEEEEEECTTSC
T ss_pred CCC-EEEEecCcccccccCCCccEEEEECCCCC
Confidence 998 5555443 456777776544
No 272
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=98.28 E-value=0.00016 Score=72.75 Aligned_cols=201 Identities=12% Similarity=0.107 Sum_probs=113.4
Q ss_pred ceeEEEec-CCCCceEEEEeCCC----cEEEEeCCCC-CCCCcccceeeeecCCccEeeEEEecCCCcEEEEEeCC----
Q 014454 180 EGYGLSWS-KFKEGHLLSGSDDA----QICLWDINAA-PKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDD---- 249 (424)
Q Consensus 180 ~v~~l~~~-~~~~~~l~s~~~dg----~i~iwd~~~~-~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~d---- 249 (424)
.+...+|| |+|+.+.++.+.+| .|+++|+.++ .... ..+. .....++|+|+++.++.+....
T Consensus 175 ~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~-----~~~~---~~~~~~~WspDg~~l~y~~~d~~~~~ 246 (751)
T 2xe4_A 175 DVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIA-----DKVS---GTNGEIVWGPDHTSLFYVTKDETLRE 246 (751)
T ss_dssp EEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCC-----CCEE---EECSCCEECSSTTEEEEEEECTTCCE
T ss_pred EEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCC-----cccc---CceeeEEEecCCCEEEEEEECCCCCC
Confidence 57789999 99984444444443 4999999876 4211 0111 1245789999998777654432
Q ss_pred CeEEEEEcCCCCCCCCeeeee-ccCCCeeEEEecCCCCeEEEEEeC--CCcEEEEECCCCCCcc--eEec-CCCCCEEEE
Q 014454 250 QYLLIWDLRTPSVSKPVQSVV-AHQSEVNCLAFNPFNEWILATGST--DKTVKLFDLRKISTAL--HTFD-SHKEEVFQV 323 (424)
Q Consensus 250 g~i~i~d~~~~~~~~~~~~~~-~~~~~v~~v~~~~~~~~~l~tg~~--dg~i~iwd~~~~~~~~--~~~~-~h~~~v~~~ 323 (424)
..|+++++.++.. .....+. ........+.|+|++++++++... ...|.++|+.+..... ..+. .......++
T Consensus 247 ~~v~~~~lgt~~~-~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~s~ 325 (751)
T 2xe4_A 247 NKVWRHVMGKLQS-EDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKGNAHNTLEIVRPREKGVRYDV 325 (751)
T ss_dssp EEEEEEETTSCGG-GCEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSCTTCCCEEESSCCCTTCCEEE
T ss_pred CEEEEEECCCCch-hcEEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCCCCCCceeEEeecCCCCceEEE
Confidence 3588888876532 1122222 223446778999999976666543 3468888988632222 3332 334455666
Q ss_pred EEcCCCCcEEEEEECC--C--eEEEeeCCCCCcccCCCCcCCCCCee-eEEEcCCCCCcceEEeCCCCCcEEEEEeCCCc
Q 014454 324 GWNPKNETILASCCLG--R--RLMVWDLSRIDEEQTPEDAEDGPPEL-LFIHGGHTSKISDFSWNPCEDWVISSVAEDNI 398 (424)
Q Consensus 324 ~~sp~~~~~l~s~~~d--g--~i~iwd~~~~~~~~~~~~~~~~~~~~-~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~ 398 (424)
.|+. ++.+++....+ + .|..+++..... ... +... .....+.++.+. +.+++++...++.
T Consensus 326 ~~~~-g~~l~~~t~~~~a~~~~L~~~d~~~~~~-----------~~~~li~~-~~~~~l~~~~~~--~~~lv~~~~~~g~ 390 (751)
T 2xe4_A 326 QMHG-TSHLVILTNEGGAVNHKLLIAPRGQPSD-----------WSHVLVDH-SEDVFMESIAVR--SNYLVVAGRRAGL 390 (751)
T ss_dssp EEET-TTEEEEEECTTTCTTCEEEEEETTSTTC-----------CCCEEECC-CSSEEEEEEEEC--SSEEEEEEEETTE
T ss_pred eeee-CCEEEEEeCCCCCCCcEEEEEcCCCccc-----------ceeeEECC-CCCcEEEEEEEE--CCEEEEEEEeCCE
Confidence 6654 44556565554 3 566666543110 011 1111 111134455554 5557888888886
Q ss_pred EEEEec
Q 014454 399 LQIWQM 404 (424)
Q Consensus 399 i~vw~~ 404 (424)
.+||-+
T Consensus 391 ~~l~~~ 396 (751)
T 2xe4_A 391 TRIWTM 396 (751)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 555543
No 273
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=98.28 E-value=0.00033 Score=64.04 Aligned_cols=218 Identities=10% Similarity=-0.033 Sum_probs=120.9
Q ss_pred EEEEEeCCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCce-----eEEEecCCCCceEEEEeCCCcEEEEeCCCCCCC
Q 014454 140 LIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEG-----YGLSWSKFKEGHLLSGSDDAQICLWDINAAPKN 214 (424)
Q Consensus 140 ~latg~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~h~~~v-----~~l~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~ 214 (424)
.+++++.++.|..+|..+ .+............ ...... +. .++.+..++.|..+|..+++..
T Consensus 145 ~v~v~~~~g~l~~~d~~t----------G~~~W~~~~~~~~~~~~~~~~~~~~--~~-~v~~g~~~g~l~~~d~~tG~~~ 211 (376)
T 3q7m_A 145 LVLIHTSNGQLQALNEAD----------GAVKWTVNLDMPSLSLRGESAPTTA--FG-AAVVGGDNGRVSAVLMEQGQMI 211 (376)
T ss_dssp EEEEECTTSEEEEEETTT----------CCEEEEEECCC-----CCCCCCEEE--TT-EEEECCTTTEEEEEETTTCCEE
T ss_pred EEEEEcCCCeEEEEECCC----------CcEEEEEeCCCCceeecCCCCcEEE--CC-EEEEEcCCCEEEEEECCCCcEE
Confidence 566778899999999876 23333333221110 111222 23 5888888999999999877432
Q ss_pred CcccceeeeecCC--cc---E-eeEEEecCCCcEEEEEeCCCeEEEEEcCCCCCCCCeeeeeccCCCeeEEEecCCCCeE
Q 014454 215 KSLEAMQIFKVHE--GV---V-EDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWI 288 (424)
Q Consensus 215 ~~~~~~~~~~~~~--~~---v-~~~~~~~~~~~~~~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~ 288 (424)
....... ..+.. .. + ...... +..+ ..++.++.+..+|.++++. +-... ......+... +. .
T Consensus 212 w~~~~~~-~~~~~~~~~~~~~~~~p~~~--~~~v-~~~~~~g~l~~~d~~tG~~---~w~~~--~~~~~~~~~~--~~-~ 279 (376)
T 3q7m_A 212 WQQRISQ-ATGSTEIDRLSDVDTTPVVV--NGVV-FALAYNGNLTALDLRSGQI---MWKRE--LGSVNDFIVD--GN-R 279 (376)
T ss_dssp EEEECCC------------CCCCCCEEE--TTEE-EEECTTSCEEEEETTTCCE---EEEEC--CCCEEEEEEE--TT-E
T ss_pred EEEeccc-CCCCcccccccccCCCcEEE--CCEE-EEEecCcEEEEEECCCCcE---Eeecc--CCCCCCceEE--CC-E
Confidence 2111000 00000 00 0 111111 3334 4677899999999998763 22221 2334444443 44 4
Q ss_pred EEEEeCCCcEEEEECCCCCCcceEec-CCCCCEEEEEEcCCCCcEEEEEECCCeEEEeeCCCCCcccCCCCcCCCCCeee
Q 014454 289 LATGSTDKTVKLFDLRKISTALHTFD-SHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPEDAEDGPPELL 367 (424)
Q Consensus 289 l~tg~~dg~i~iwd~~~~~~~~~~~~-~h~~~v~~~~~sp~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~ 367 (424)
+..++.++.|..+|..+ ++.+.... .....+...... +. .|+.++.+|.|.++|..++. .+
T Consensus 280 l~~~~~~g~l~~~d~~t-G~~~w~~~~~~~~~~~~~~~~--~~-~l~v~~~~g~l~~~d~~tG~--------------~~ 341 (376)
T 3q7m_A 280 IYLVDQNDRVMALTIDG-GVTLWTQSDLLHRLLTSPVLY--NG-NLVVGDSEGYLHWINVEDGR--------------FV 341 (376)
T ss_dssp EEEEETTCCEEEEETTT-CCEEEEECTTTTSCCCCCEEE--TT-EEEEECTTSEEEEEETTTCC--------------EE
T ss_pred EEEEcCCCeEEEEECCC-CcEEEeecccCCCcccCCEEE--CC-EEEEEeCCCeEEEEECCCCc--------------EE
Confidence 66778899999999988 55554444 222223333332 22 57788889999999998763 33
Q ss_pred EEEcCCCCCcce-EEeCCCCCcEEEEEeCCCcEEEEe
Q 014454 368 FIHGGHTSKISD-FSWNPCEDWVISSVAEDNILQIWQ 403 (424)
Q Consensus 368 ~~~~~h~~~v~~-~~~~~~~~~~l~s~~~dg~i~vw~ 403 (424)
.........+.. .... ++ .|+.++.+|.|..|+
T Consensus 342 ~~~~~~~~~~~~~~~~~-~~--~l~v~~~~G~l~~~~ 375 (376)
T 3q7m_A 342 AQQKVDSSGFQTEPVAA-DG--KLLIQAKDGTVYSIT 375 (376)
T ss_dssp EEEECCTTCBCSCCEEE-TT--EEEEEBTTSCEEEEE
T ss_pred EEEecCCCcceeCCEEE-CC--EEEEEeCCCEEEEEe
Confidence 333322222222 2222 33 466778899999886
No 274
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=98.26 E-value=0.00049 Score=61.00 Aligned_cols=200 Identities=14% Similarity=0.073 Sum_probs=118.6
Q ss_pred CceeEEEecCCCCceEEEEeCCCcEEEEeCCCCCCCCcccceeeeecCCccEeeEEEecCCCcEEEEEeC-CC-eEEEEE
Q 014454 179 TEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGD-DQ-YLLIWD 256 (424)
Q Consensus 179 ~~v~~l~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~-dg-~i~i~d 256 (424)
....+++|++++. ++++-..++.|..||.... ....+ .....+..+++.+++. ++++... ++ .|..+|
T Consensus 32 ~~pegia~~~~g~-lyv~d~~~~~I~~~d~~g~-------~~~~~-~~~~~p~gia~~~dG~-l~vad~~~~~~~v~~~d 101 (306)
T 2p4o_A 32 TFLENLASAPDGT-IFVTNHEVGEIVSITPDGN-------QQIHA-TVEGKVSGLAFTSNGD-LVATGWNADSIPVVSLV 101 (306)
T ss_dssp CCEEEEEECTTSC-EEEEETTTTEEEEECTTCC-------EEEEE-ECSSEEEEEEECTTSC-EEEEEECTTSCEEEEEE
T ss_pred CCcceEEECCCCC-EEEEeCCCCeEEEECCCCc-------eEEEE-eCCCCceeEEEcCCCc-EEEEeccCCcceEEEEc
Confidence 4577899999776 5666667899999987642 11111 1245688999999987 5545433 22 477777
Q ss_pred cCCCCCCCCeeeeeccCCCeeEEEecCCCCeEEEEEeCCCcEEEEECCCCCCcceE---------ecCCCCCEEEEEEcC
Q 014454 257 LRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATGSTDKTVKLFDLRKISTALHT---------FDSHKEEVFQVGWNP 327 (424)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~l~tg~~dg~i~iwd~~~~~~~~~~---------~~~h~~~v~~~~~sp 327 (424)
..+++. ..+... ........++..+.+ .++++-..++.|.++|.......+.. ....-...+.+ +|
T Consensus 102 ~~~g~~-~~~~~~-~~~~~~~g~~~~~~~-~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngi--s~ 176 (306)
T 2p4o_A 102 KSDGTV-ETLLTL-PDAIFLNGITPLSDT-QYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGL--KR 176 (306)
T ss_dssp CTTSCE-EEEEEC-TTCSCEEEEEESSSS-EEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEE--EE
T ss_pred CCCCeE-EEEEeC-CCccccCcccccCCC-cEEEEECCCCeEEEEeCCCCcEeEEEECCccccccccCCCCcCCCc--Cc
Confidence 766542 111111 112233445544433 35555556889999997642111110 00111234556 78
Q ss_pred CCCcEEEEEECCCeEEEeeCCCCCcccCCCCcCCCCCeeeEEEcCCCCCcceEEeCCCCCcEEEEEeCCCcEEEEecCC
Q 014454 328 KNETILASCCLGRRLMVWDLSRIDEEQTPEDAEDGPPELLFIHGGHTSKISDFSWNPCEDWVISSVAEDNILQIWQMAE 406 (424)
Q Consensus 328 ~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~vw~~~~ 406 (424)
++..++++-...+.|..|++...... ...+.+... .....++++++|. ++++....+.|.+++...
T Consensus 177 dg~~lyv~d~~~~~I~~~~~~~~g~~--------~~~~~~~~~----~~P~gi~vd~dG~-l~va~~~~~~V~~~~~~G 242 (306)
T 2p4o_A 177 FGNFLYVSNTEKMLLLRIPVDSTDKP--------GEPEIFVEQ----TNIDDFAFDVEGN-LYGATHIYNSVVRIAPDR 242 (306)
T ss_dssp ETTEEEEEETTTTEEEEEEBCTTSCB--------CCCEEEEES----CCCSSEEEBTTCC-EEEECBTTCCEEEECTTC
T ss_pred CCCEEEEEeCCCCEEEEEEeCCCCCC--------CccEEEecc----CCCCCeEECCCCC-EEEEeCCCCeEEEECCCC
Confidence 88767777777889999998642110 011222211 3467899999998 677766778899998763
No 275
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=98.25 E-value=0.00028 Score=69.84 Aligned_cols=260 Identities=10% Similarity=0.007 Sum_probs=135.8
Q ss_pred CCCcEEEEEEeccCCceeEEEecC-CCCcEEEEEeCCC-----------eEEEEeCCCCCCCCCCCCCCCCcEEEec-CC
Q 014454 112 ANGKVQIIQQINHDGEVNRARYMP-QNPFLIATKTVSA-----------EVYVFDYSKHPSKPPLDGACSPDLRLRG-HS 178 (424)
Q Consensus 112 ~~~~~~~~~~~~h~~~v~~~~~~p-~~~~~latg~~dg-----------~v~iw~~~~~~~~~~~~~~~~~~~~~~~-h~ 178 (424)
..++...+..+.. .-..+++.| ++ .+++.|+.+. .+.+||..+ ..+.....+.. +.
T Consensus 174 ~~~~W~~~~~~P~--~~~~~av~~~~g-~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t--------~~w~~~~~~~~~~~ 242 (656)
T 1k3i_A 174 GLGRWGPTIDLPI--VPAAAAIEPTSG-RVLMWSSYRNDAFGGSPGGITLTSSWDPST--------GIVSDRTVTVTKHD 242 (656)
T ss_dssp TSCEEEEEEECSS--CCSEEEEETTTT-EEEEEEECCCTTTCSCCCSEEEEEEECTTT--------CCBCCCEEEECSCC
T ss_pred CCCeeeeeccCCC--CceeEEEEecCC-EEEEEecccccccccCCCCeEEEEEEeCCC--------CcEEeCcccCCCCC
Confidence 3344444433332 334667777 55 4777776542 688999887 44555555433 22
Q ss_pred CceeEEEecCCCCceEEEEe-CCCcEEEEeCCCCCCCCcccceeeeecCCccEeeEEEecCCCcEEEEEe-CC-----Ce
Q 014454 179 TEGYGLSWSKFKEGHLLSGS-DDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVG-DD-----QY 251 (424)
Q Consensus 179 ~~v~~l~~~~~~~~~l~s~~-~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~-~d-----g~ 251 (424)
....++++..++. +++.|+ .+..+.+||..+.. ...+..+.. ...-.+++..+++. +++.|+ .+ ..
T Consensus 243 ~~~~~~~~~~~g~-lyv~GG~~~~~v~~yd~~t~~----W~~~~~~~~-~R~~~s~~~~~dg~-iyv~GG~~~~~~~~~~ 315 (656)
T 1k3i_A 243 MFCPGISMDGNGQ-IVVTGGNDAKKTSLYDSSSDS----WIPGPDMQV-ARGYQSSATMSDGR-VFTIGGSWSGGVFEKN 315 (656)
T ss_dssp CSSCEEEECTTSC-EEEECSSSTTCEEEEEGGGTE----EEECCCCSS-CCSSCEEEECTTSC-EEEECCCCCSSSCCCC
T ss_pred CccccccCCCCCC-EEEeCCCCCCceEEecCcCCc----eeECCCCCc-cccccceEEecCCe-EEEEeCcccCCccccc
Confidence 3334567777776 777777 45689999987642 111111111 11112344555665 666777 34 56
Q ss_pred EEEEEcCCCCCCCCeeeeec-----cCCCeeEEEecCCCCeEEEEEeCCC---------cEEEEECCCCCCcceEecCC-
Q 014454 252 LLIWDLRTPSVSKPVQSVVA-----HQSEVNCLAFNPFNEWILATGSTDK---------TVKLFDLRKISTALHTFDSH- 316 (424)
Q Consensus 252 i~i~d~~~~~~~~~~~~~~~-----~~~~v~~v~~~~~~~~~l~tg~~dg---------~i~iwd~~~~~~~~~~~~~h- 316 (424)
+.+||..+.. ...+.. ....-....+..++. +++.|+.+| .+..||.... .-......+
T Consensus 316 ~e~yd~~t~~----W~~~~~~~~~p~~~~~~~~~~~~~~~-iyv~Gg~~g~~~~~~~~~~v~~yd~~~~-~w~~~~~~~~ 389 (656)
T 1k3i_A 316 GEVYSPSSKT----WTSLPNAKVNPMLTADKQGLYRSDNH-AWLFGWKKGSVFQAGPSTAMNWYYTSGS-GDVKSAGKRQ 389 (656)
T ss_dssp EEEEETTTTE----EEEETTSCSGGGCCCCTTGGGTTTCS-CCEEECGGGCEEECCSSSEEEEEECSTT-CEEEEEEECE
T ss_pred ceEeCCCCCc----ceeCCCccccccccccccceeecCCc-eEEEECCCCcEEEecCccceeeeecCCc-ceeecCCccc
Confidence 8999998754 111100 000000011223333 455565443 5678888763 211111111
Q ss_pred --------CCCEEEEEEcCCCCcEEEEEECCC-----------eEEEeeCCCCCcccCCCCcCCCCCeeeEEE--cCCCC
Q 014454 317 --------KEEVFQVGWNPKNETILASCCLGR-----------RLMVWDLSRIDEEQTPEDAEDGPPELLFIH--GGHTS 375 (424)
Q Consensus 317 --------~~~v~~~~~sp~~~~~l~s~~~dg-----------~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~--~~h~~ 375 (424)
...-.++.|...+..+++.|+.++ .|.+||.....-. ... ..+..
T Consensus 390 ~~~~~~~~~~~~~av~~~~~~~~i~v~GG~~~~~~~~~~~~~~~v~~yd~~~~~W~--------------~~~~~~mp~~ 455 (656)
T 1k3i_A 390 SNRGVAPDAMCGNAVMYDAVKGKILTFGGSPDYQDSDATTNAHIITLGEPGTSPNT--------------VFASNGLYFA 455 (656)
T ss_dssp ETTEECCCCBTCEEEEEETTTTEEEEECCBSSSSSSBCCCCEEEEECCSTTSCCEE--------------EECTTCCSSC
T ss_pred cccccCCCCCCCceEeccCCCCeEEEEeCCCCCCCCCcCCcceEEEcCCCCCCCee--------------EEccCCCCCC
Confidence 112345555543445788887542 5777776653211 110 11122
Q ss_pred Cc-ceEEeCCCCCcEEEEEeCC-----------CcEEEEecCCccCC
Q 014454 376 KI-SDFSWNPCEDWVISSVAED-----------NILQIWQMAENIYH 410 (424)
Q Consensus 376 ~v-~~~~~~~~~~~~l~s~~~d-----------g~i~vw~~~~~~~~ 410 (424)
.. .++...|+++ +++.||.+ ..+.+||+.++.+.
T Consensus 456 R~~~~~~~l~~g~-i~v~GG~~~~~~~~~~~~~~~v~~ydp~t~~W~ 501 (656)
T 1k3i_A 456 RTFHTSVVLPDGS-TFITGGQRRGIPFEDSTPVFTPEIYVPEQDTFY 501 (656)
T ss_dssp CBSCEEEECTTSC-EEEECCBSBCCTTCCCSBCCCCEEEEGGGTEEE
T ss_pred cccCCeEECCCCC-EEEECCcccCcCcCCCCcccceEEEcCCCCcee
Confidence 22 3445668888 78887754 46889999877654
No 276
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=98.19 E-value=0.0031 Score=63.80 Aligned_cols=238 Identities=9% Similarity=0.001 Sum_probs=144.0
Q ss_pred CceeEEEecCCCCcEEEEEeCCCeEEEEeCCCCCCCCCCCCCCCCcEEEe----------cCCCceeEEEecCCCCceEE
Q 014454 126 GEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLR----------GHSTEGYGLSWSKFKEGHLL 195 (424)
Q Consensus 126 ~~v~~~~~~p~~~~~latg~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~----------~h~~~v~~l~~~~~~~~~l~ 195 (424)
..|.++...+++. |-.|+.++-|..++.... ....+. -....|.++...+++. |.
T Consensus 313 ~~v~~i~~D~~g~--lWigt~~~Gl~~~~~~~~-----------~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~--lW 377 (781)
T 3v9f_A 313 ASARYIFQDSFNN--IWIGTWGGGINFISNAPP-----------TFHTWSYSPTQMNESSLSNKVVSSVCDDGQGK--LW 377 (781)
T ss_dssp SCEEEEEECSSCC--EEEEEBSSCEEEECSSCC-----------SCEEEC----CCCSSCCSSSCEEEEEECTTSC--EE
T ss_pred CeEEEEEEeCCCC--EEEEecCCeEEEeCCCCC-----------cceeeccCccccccCCCCCcceEEEEEcCCCC--EE
Confidence 5688888888775 555666677888887641 111111 0234688888877654 67
Q ss_pred EEeCCCcEEEEeCCCCCCCCcccceeeeecCCccEeeEEEecCCCcEEEEEeCCCeEEEEEcCCCCCCCCeeeee---cc
Q 014454 196 SGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVV---AH 272 (424)
Q Consensus 196 s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~dg~i~i~d~~~~~~~~~~~~~~---~~ 272 (424)
.|+.++-|..|+..+.... .+. .........|.++...+++. +. .|+.++-|..+|.+++. +..+. ..
T Consensus 378 igt~~~Gl~~~~~~~~~~~-~~~--~~~~~~~~~v~~i~~d~~g~-lW-igt~~~Gl~~~~~~~~~----~~~~~~~~~~ 448 (781)
T 3v9f_A 378 IGTDGGGINVFENGKRVAI-YNK--ENRELLSNSVLCSLKDSEGN-LW-FGTYLGNISYYNTRLKK----FQIIELEKNE 448 (781)
T ss_dssp EEEBSSCEEEEETTEEEEE-CC-------CCCSBEEEEEECTTSC-EE-EEETTEEEEEECSSSCE----EEECCSTTTC
T ss_pred EEeCCCcEEEEECCCCeEE-Ecc--CCCCCCCcceEEEEECCCCC-EE-EEeccCCEEEEcCCCCc----EEEeccCCCC
Confidence 7776677888987643110 000 00012346788998887765 54 46666778899887654 22221 13
Q ss_pred CCCeeEEEecCCCCeEEEEEeCCCcEEEEECCCCCCcceEecCC-----CCCEEEEEEcCCCCcEEEEEECCCeEEEeeC
Q 014454 273 QSEVNCLAFNPFNEWILATGSTDKTVKLFDLRKISTALHTFDSH-----KEEVFQVGWNPKNETILASCCLGRRLMVWDL 347 (424)
Q Consensus 273 ~~~v~~v~~~~~~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~~h-----~~~v~~~~~sp~~~~~l~s~~~dg~i~iwd~ 347 (424)
...|.++...+++. |..|+. +-|..||..+ +......... ...|.++...+++. |..|+.++-+..||.
T Consensus 449 ~~~v~~i~~d~~g~--lwigt~-~Gl~~~~~~~-~~~~~~~~~~~~~~~~~~i~~i~~d~~g~--lWigt~~~Gl~~~~~ 522 (781)
T 3v9f_A 449 LLDVRVFYEDKNKK--IWIGTH-AGVFVIDLAS-KKVIHHYDTSNSQLLENFVRSIAQDSEGR--FWIGTFGGGVGIYTP 522 (781)
T ss_dssp CCCEEEEEECTTSE--EEEEET-TEEEEEESSS-SSCCEEECTTTSSCSCSCEEEEEECTTCC--EEEEESSSCEEEECT
T ss_pred CCeEEEEEECCCCC--EEEEEC-CceEEEeCCC-CeEEecccCcccccccceeEEEEEcCCCC--EEEEEcCCCEEEEeC
Confidence 46789999888775 445555 5688999876 3322222111 36799999999885 444555333777887
Q ss_pred CCCCcccCCCCcCCCCCeeeEEEc----CCCCCcceEEeCCCCCcEEEEEeCCCcEEEEecCCccCC
Q 014454 348 SRIDEEQTPEDAEDGPPELLFIHG----GHTSKISDFSWNPCEDWVISSVAEDNILQIWQMAENIYH 410 (424)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~~~~~~----~h~~~v~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~~ 410 (424)
.... +..+. -....|.++...+++. +.+++ .+|.|..|+..++.+.
T Consensus 523 ~~~~---------------~~~~~~~~~l~~~~i~~i~~d~~g~-lWi~T-~~Glv~~~d~~~~~~~ 572 (781)
T 3v9f_A 523 DMQL---------------VRKFNQYEGFCSNTINQIYRSSKGQ-MWLAT-GEGLVCFPSARNFDYQ 572 (781)
T ss_dssp TCCE---------------EEEECTTTTCSCSCEEEEEECTTSC-EEEEE-TTEEEEESCTTTCCCE
T ss_pred CCCe---------------EEEccCCCCCCCCeeEEEEECCCCC-EEEEE-CCCceEEECCCCCcEE
Confidence 5431 11111 1134588888888888 45543 4665588888776543
No 277
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=98.12 E-value=0.0086 Score=58.59 Aligned_cols=224 Identities=7% Similarity=0.012 Sum_probs=141.7
Q ss_pred CCCeEEEEeCCCCCCCCCCCCCCCCcEEEe-cCCCceeEEEecCCCCceEEEEeCCCcEEEEeCCCCCCCCcccceeeee
Q 014454 146 VSAEVYVFDYSKHPSKPPLDGACSPDLRLR-GHSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFK 224 (424)
Q Consensus 146 ~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~-~h~~~v~~l~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~ 224 (424)
....|+..++... .....+. ..-..+.+|+|++.+..++.+-..++.|..++++.... .....
T Consensus 13 ~~~~I~~i~l~~~----------~~~~~~~~~~~~~~~~l~~d~~~~~lywtD~~~~~I~r~~~~g~~~------~~v~~ 76 (628)
T 4a0p_A 13 RRADIRRISLETN----------NNNVAIPLTGVKEASALDFDVTDNRIYWTDISLKTISRAFMNGSAL------EHVVE 76 (628)
T ss_dssp ETTEEEEEESSCT----------TCEEECCCCSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC------EEEEC
T ss_pred eCCcEEEEECCCC----------CcceEEEcCCCCceEEEEEECCCCEEEEEECCCCeEEEEECCCCCc------EEEEe
Confidence 4578999998761 1111111 12346789999997775555656688999999865421 11112
Q ss_pred cCCccEeeEEEecCCCcEEEEEeCCCeEEEEEcCCCCCCCCeeeeeccCCCeeEEEecCCCCeEEEEE-eCCCcEEEEEC
Q 014454 225 VHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATG-STDKTVKLFDL 303 (424)
Q Consensus 225 ~~~~~v~~~~~~~~~~~~~~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~l~tg-~~dg~i~iwd~ 303 (424)
........+++.+.+.+++.+-...+.|.+.++..... .......-.....|+++|....++.+- +..+.|...++
T Consensus 77 ~g~~~P~GlAvD~~~~~LY~tD~~~~~I~v~~~dG~~~---~~l~~~~l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~ 153 (628)
T 4a0p_A 77 FGLDYPEGMAVDWLGKNLYWADTGTNRIEVSKLDGQHR---QVLVWKDLDSPRALALDPAEGFMYWTEWGGKPKIDRAAM 153 (628)
T ss_dssp SSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSTTC---EEEECSSCCCEEEEEEETTTTEEEEEECSSSCEEEEEET
T ss_pred CCCCCcceEEEEeCCCEEEEEECCCCEEEEEecCCCcE---EEEEeCCCCCcccEEEccCCCeEEEeCCCCCCEEEEEeC
Confidence 12245778999888888888877889999999975432 112223345678999999776666654 22567888887
Q ss_pred CCCCCcceEecCCCCCEEEEEEcCCCCcEEEEEECCCeEEEeeCCCCCcccCCCCcCCCCCeeeEEEcCCCCCcceEEeC
Q 014454 304 RKISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPEDAEDGPPELLFIHGGHTSKISDFSWN 383 (424)
Q Consensus 304 ~~~~~~~~~~~~h~~~v~~~~~sp~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~ 383 (424)
.. .....+...-.....|++++.+..++.+-...+.|..+++..... +.+. .......++++.
T Consensus 154 dG--~~~~~l~~~~~~P~GlalD~~~~~LY~aD~~~~~I~~~d~dG~~~------------~v~~---~~l~~P~glav~ 216 (628)
T 4a0p_A 154 DG--SERTTLVPNVGRANGLTIDYAKRRLYWTDLDTNLIESSNMLGLNR------------EVIA---DDLPHPFGLTQY 216 (628)
T ss_dssp TS--CSCEEEECSCSSEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC------------EEEE---ECCSCEEEEEEE
T ss_pred CC--CceEEEECCCCCcceEEEccccCEEEEEECCCCEEEEEcCCCCce------------EEee---ccCCCceEEEEE
Confidence 64 223333333467889999998776666666778899999865321 2221 122334567775
Q ss_pred CCCCcEEEEEeCCCcEEEEecCCc
Q 014454 384 PCEDWVISSVAEDNILQIWQMAEN 407 (424)
Q Consensus 384 ~~~~~~l~s~~~dg~i~vw~~~~~ 407 (424)
. + .++++-...+.|...+..++
T Consensus 217 ~-~-~ly~tD~~~~~I~~~dk~tg 238 (628)
T 4a0p_A 217 Q-D-YIYWTDWSRRSIERANKTSG 238 (628)
T ss_dssp T-T-EEEEEETTTTEEEEEETTTC
T ss_pred C-C-EEEEecCCCCEEEEEECCCC
Confidence 4 3 36666656778887776554
No 278
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=98.10 E-value=0.0035 Score=63.37 Aligned_cols=252 Identities=8% Similarity=0.015 Sum_probs=144.0
Q ss_pred CCceeEEEecCCCCcEEEEEeCCCeEEEEeCCCCCCCCCCCCCCCCcEE-----E-------ecCCCceeEEEecCCCCc
Q 014454 125 DGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLR-----L-------RGHSTEGYGLSWSKFKEG 192 (424)
Q Consensus 125 ~~~v~~~~~~p~~~~~latg~~dg~v~iw~~~~~~~~~~~~~~~~~~~~-----~-------~~h~~~v~~l~~~~~~~~ 192 (424)
...|.++...+++. |..|+..+-|.+++..... ...... + .-....|.++...+++.
T Consensus 257 ~~~i~~i~~d~~g~--lWigt~~~Gl~~~~~~~~~--------~~~~~~~~f~~~~~~~~~~~l~~~~v~~i~~D~~g~- 325 (781)
T 3v9f_A 257 SSYIFSIKQLKDNK--LWIATELNGIMILDLQQNQ--------FLLPEQIRFEFIREGDNNYSLSNASARYIFQDSFNN- 325 (781)
T ss_dssp CCCEEEEEECTTSE--EEEEESSSCEEEEETTCC-----------------CEEECBCSSTTSBSSSCEEEEEECSSCC-
T ss_pred CceEEEEEECCCCC--EEEEeCCCCeEEECCCCCe--------eeeeeccccccccCCCCCCCCCCCeEEEEEEeCCCC-
Confidence 35688888877774 5556664568888876521 111100 0 01245688888887665
Q ss_pred eEEEEeCCCcEEEEeCCCCCCCCccccee----eeecCCccEeeEEEecCCCcEEEEEeCCCeEEEEEcCCCCCCCCeee
Q 014454 193 HLLSGSDDAQICLWDINAAPKNKSLEAMQ----IFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQS 268 (424)
Q Consensus 193 ~l~s~~~dg~i~iwd~~~~~~~~~~~~~~----~~~~~~~~v~~~~~~~~~~~~~~s~~~dg~i~i~d~~~~~~~~~~~~ 268 (424)
|-.|+.++-|..++....... .+.... ........|.++...+++. +. .|+.++-|..||..+.........
T Consensus 326 -lWigt~~~Gl~~~~~~~~~~~-~~~~~~~~~~~~~l~~~~v~~i~~d~~g~-lW-igt~~~Gl~~~~~~~~~~~~~~~~ 401 (781)
T 3v9f_A 326 -IWIGTWGGGINFISNAPPTFH-TWSYSPTQMNESSLSNKVVSSVCDDGQGK-LW-IGTDGGGINVFENGKRVAIYNKEN 401 (781)
T ss_dssp -EEEEEBSSCEEEECSSCCSCE-EEC----CCCSSCCSSSCEEEEEECTTSC-EE-EEEBSSCEEEEETTEEEEECC---
T ss_pred -EEEEecCCeEEEeCCCCCcce-eeccCccccccCCCCCcceEEEEEcCCCC-EE-EEeCCCcEEEEECCCCeEEEccCC
Confidence 777777778888987654211 110000 0011235688998887765 44 566666788899865331000000
Q ss_pred eeccCCCeeEEEecCCCCeEEEEEeCCCcEEEEECCCCCCcceEec---CCCCCEEEEEEcCCCCcEEEEEECCCeEEEe
Q 014454 269 VVAHQSEVNCLAFNPFNEWILATGSTDKTVKLFDLRKISTALHTFD---SHKEEVFQVGWNPKNETILASCCLGRRLMVW 345 (424)
Q Consensus 269 ~~~~~~~v~~v~~~~~~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~---~h~~~v~~~~~sp~~~~~l~s~~~dg~i~iw 345 (424)
.......|.++...+++. |..|+.++-|..+|.++ ++ ...+. .....|.++...+++. |..|+.. -|..|
T Consensus 402 ~~~~~~~v~~i~~d~~g~--lWigt~~~Gl~~~~~~~-~~-~~~~~~~~~~~~~v~~i~~d~~g~--lwigt~~-Gl~~~ 474 (781)
T 3v9f_A 402 RELLSNSVLCSLKDSEGN--LWFGTYLGNISYYNTRL-KK-FQIIELEKNELLDVRVFYEDKNKK--IWIGTHA-GVFVI 474 (781)
T ss_dssp --CCCSBEEEEEECTTSC--EEEEETTEEEEEECSSS-CE-EEECCSTTTCCCCEEEEEECTTSE--EEEEETT-EEEEE
T ss_pred CCCCCcceEEEEECCCCC--EEEEeccCCEEEEcCCC-Cc-EEEeccCCCCCCeEEEEEECCCCC--EEEEECC-ceEEE
Confidence 012346789999888776 55677767788998765 22 23332 2346799999988874 4445554 58889
Q ss_pred eCCCCCcccCCCCcCCCCCeeeEEEcCCCCCcceEEeCCCCCcEEEEEeCCCcEEEEecCCccC
Q 014454 346 DLSRIDEEQTPEDAEDGPPELLFIHGGHTSKISDFSWNPCEDWVISSVAEDNILQIWQMAENIY 409 (424)
Q Consensus 346 d~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~ 409 (424)
|............. .. ......|.++...+++. +.+. +.++-|..|+..++.+
T Consensus 475 ~~~~~~~~~~~~~~---~~------~~~~~~i~~i~~d~~g~-lWig-t~~~Gl~~~~~~~~~~ 527 (781)
T 3v9f_A 475 DLASKKVIHHYDTS---NS------QLLENFVRSIAQDSEGR-FWIG-TFGGGVGIYTPDMQLV 527 (781)
T ss_dssp ESSSSSCCEEECTT---TS------SCSCSCEEEEEECTTCC-EEEE-ESSSCEEEECTTCCEE
T ss_pred eCCCCeEEecccCc---cc------ccccceeEEEEEcCCCC-EEEE-EcCCCEEEEeCCCCeE
Confidence 87654311100000 00 01134688898998888 4444 3333477788776543
No 279
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=98.07 E-value=0.00031 Score=69.57 Aligned_cols=155 Identities=9% Similarity=0.083 Sum_probs=85.0
Q ss_pred EEEEEeCCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCC-ceeEEEecC--CCCceEEEEeC------CCcEEEEeCCC
Q 014454 140 LIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHST-EGYGLSWSK--FKEGHLLSGSD------DAQICLWDINA 210 (424)
Q Consensus 140 ~latg~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~h~~-~v~~l~~~~--~~~~~l~s~~~------dg~i~iwd~~~ 210 (424)
.+++++.++.|..+|..+ .+.+........ ....+.-+| .+. .++++.. +|.|..+|..+
T Consensus 119 ~v~v~~~dg~l~alD~~t----------G~~~W~~~~~~~~~~~~~~~~P~v~~~-~v~vg~~~~~~~~~g~v~a~D~~t 187 (668)
T 1kv9_A 119 KVYVGTLDGRLIALDAKT----------GKAIWSQQTTDPAKPYSITGAPRVVKG-KVIIGNGGAEYGVRGFVSAYDADT 187 (668)
T ss_dssp EEEEECTTSEEEEEETTT----------CCEEEEEECSCTTSSCBCCSCCEEETT-EEEECCBCTTTCCBCEEEEEETTT
T ss_pred EEEEEcCCCEEEEEECCC----------CCEeeeeccCCCCCcceecCCCEEECC-EEEEeCCCCCcCCCCEEEEEECCC
Confidence 566778899999999877 333444432110 000111111 123 4555543 58999999988
Q ss_pred CCCCCcccceee-----------------e--------ecCCccEeeEEEecCCCcEEEEEeCCC---------------
Q 014454 211 APKNKSLEAMQI-----------------F--------KVHEGVVEDVAWHLRHEYLFGSVGDDQ--------------- 250 (424)
Q Consensus 211 ~~~~~~~~~~~~-----------------~--------~~~~~~v~~~~~~~~~~~~~~s~~~dg--------------- 250 (424)
++.......... + .++......+++.+....+ ..+..++
T Consensus 188 G~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~~w~~~~gg~~w~~~a~d~~~~~v-y~~~~~g~~w~~~~~~~~~gd~ 266 (668)
T 1kv9_A 188 GKLAWRFYTVPGDPALPYEHPELREAAKTWQGDQYWKLGGGGTVWDSMAYDPELDLL-YVGTGNGSPWNREVRSPGGGDN 266 (668)
T ss_dssp CCEEEEEESSCCCTTSCCSSHHHHHHHTTCCSSCHHHHCEECCCCSCEEEETTTTEE-EEECCCEESSCHHHHSTTCCCC
T ss_pred CcEEEEecccCCCCCccccccccccccccCCccceeeeCCCCccccceEEcCCCCEE-EEeCCCCCccccCCCCCCCCCc
Confidence 865432211000 0 0011122346788876644 4666555
Q ss_pred ----eEEEEEcCCCCCCCCeeeeec--cC-------CCeeEEEecCCCC--eEEEEEeCCCcEEEEECCCCCCcc
Q 014454 251 ----YLLIWDLRTPSVSKPVQSVVA--HQ-------SEVNCLAFNPFNE--WILATGSTDKTVKLFDLRKISTAL 310 (424)
Q Consensus 251 ----~i~i~d~~~~~~~~~~~~~~~--~~-------~~v~~v~~~~~~~--~~l~tg~~dg~i~iwd~~~~~~~~ 310 (424)
.|..+|.++++. +-.+.. |. .+.....+..+++ .+++.++.+|.++++|.++ ++++
T Consensus 267 l~~~~v~AlD~~tG~~---~W~~~~~~~~~wd~~~~~~~~~~d~~~~G~~~~~v~~~~~~G~l~~lD~~t-G~~l 337 (668)
T 1kv9_A 267 LYLSSILAIRPDTGKL---AWHYQVTPGDSWDFTATQQITLAELNIDGKPRKVLMQAPKNGFFYVLDRTN-GKLI 337 (668)
T ss_dssp TTTTEEEEECTTTCCE---EEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTT-CCEE
T ss_pred eeeeeEEEEcCCCCce---eeEeecCCCccccccCCCCcEEEEeccCCcEEEEEEEECCCCEEEEEECCC-CCEe
Confidence 499999998874 222222 21 2222222222343 3588899999999999988 5555
No 280
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=98.06 E-value=0.0093 Score=58.36 Aligned_cols=202 Identities=6% Similarity=-0.004 Sum_probs=133.2
Q ss_pred CceeEEEecCCCCcEEEEEeCCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCceeEEEecCCCCceEEEEeCCCcEEE
Q 014454 126 GEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDDAQICL 205 (424)
Q Consensus 126 ~~v~~~~~~p~~~~~latg~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~i 205 (424)
..+..|+|.+.+..++.+-..++.|+.+++.. ......+........+|++.+.+..+.++-...+.|.+
T Consensus 37 ~~~~~l~~d~~~~~lywtD~~~~~I~r~~~~g----------~~~~~v~~~g~~~P~GlAvD~~~~~LY~tD~~~~~I~v 106 (628)
T 4a0p_A 37 KEASALDFDVTDNRIYWTDISLKTISRAFMNG----------SALEHVVEFGLDYPEGMAVDWLGKNLYWADTGTNRIEV 106 (628)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETTS----------CSCEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEE
T ss_pred CceEEEEEECCCCEEEEEECCCCeEEEEECCC----------CCcEEEEeCCCCCcceEEEEeCCCEEEEEECCCCEEEE
Confidence 45778999998777788777789999999875 11122222222346678887766655566566788999
Q ss_pred EeCCCCCCCCcccceeeeecCCccEeeEEEecCCCcEEEEE-eCCCeEEEEEcCCCCCCCCeeeeeccCCCeeEEEecCC
Q 014454 206 WDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSV-GDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPF 284 (424)
Q Consensus 206 wd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~-~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~v~~~~~ 284 (424)
.++..... . ......-.....|++.|....++.+- +..+.|...++..... ..+...-...+.|++++.
T Consensus 107 ~~~dG~~~-~-----~l~~~~l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~dG~~~----~~l~~~~~~P~GlalD~~ 176 (628)
T 4a0p_A 107 SKLDGQHR-Q-----VLVWKDLDSPRALALDPAEGFMYWTEWGGKPKIDRAAMDGSER----TTLVPNVGRANGLTIDYA 176 (628)
T ss_dssp EETTSTTC-E-----EEECSSCCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSC----EEEECSCSSEEEEEEETT
T ss_pred EecCCCcE-E-----EEEeCCCCCcccEEEccCCCeEEEeCCCCCCEEEEEeCCCCce----EEEECCCCCcceEEEccc
Confidence 99865421 1 11112334578999999777777664 2357788888865432 222234456789999998
Q ss_pred CCeEEEEEeCCCcEEEEECCCCCCcceEecCCCCCEEEEEEcCCCCcEEEEEECCCeEEEeeCCCCC
Q 014454 285 NEWILATGSTDKTVKLFDLRKISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRID 351 (424)
Q Consensus 285 ~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~l~s~~~dg~i~iwd~~~~~ 351 (424)
+..++++-...+.|..+|+..... ..+...-.....+++.. + .++.+-...+.|...|..++.
T Consensus 177 ~~~LY~aD~~~~~I~~~d~dG~~~--~v~~~~l~~P~glav~~-~-~ly~tD~~~~~I~~~dk~tg~ 239 (628)
T 4a0p_A 177 KRRLYWTDLDTNLIESSNMLGLNR--EVIADDLPHPFGLTQYQ-D-YIYWTDWSRRSIERANKTSGQ 239 (628)
T ss_dssp TTEEEEEETTTTEEEEEETTSCSC--EEEEECCSCEEEEEEET-T-EEEEEETTTTEEEEEETTTCC
T ss_pred cCEEEEEECCCCEEEEEcCCCCce--EEeeccCCCceEEEEEC-C-EEEEecCCCCEEEEEECCCCC
Confidence 887777777778999999975322 33333344566788865 3 466666668888888876554
No 281
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=98.04 E-value=3.8e-05 Score=76.38 Aligned_cols=209 Identities=8% Similarity=0.012 Sum_probs=123.5
Q ss_pred CCceeEEEecCCCCcEEEEEeCCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCceeEEEecCCCCceEEEEeCCCcEE
Q 014454 125 DGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDDAQIC 204 (424)
Q Consensus 125 ~~~v~~~~~~p~~~~~latg~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~ 204 (424)
...+..|+|.+.+..++++-...+.|+.+++...... ......+........+|++.+.+..++++-...+.|.
T Consensus 405 ~~~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~------~~~~~~i~~~~~~P~glavD~~~g~LY~tD~~~~~I~ 478 (699)
T 1n7d_A 405 LRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGV------SSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVS 478 (699)
T ss_dssp CTTCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-------CCCCCBCCSCC--CCCEECCCSSSBCEECCTTTSCEE
T ss_pred CcceEEEccccccCeEEEEecCCCeEEEEecCCCCCC------cceEEEEeCCCCCcceEEEEeeCCcEEEEeccCCeEE
Confidence 3456788999876656666556788999988641100 0001111111123456777765554555555678899
Q ss_pred EEeCCCCCCCCcccceeeeecCCccEeeEEEecCCCcEEEEEeCC-CeEEEEEcCCCCCCCCeeeeeccCCCeeEEEecC
Q 014454 205 LWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDD-QYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNP 283 (424)
Q Consensus 205 iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~d-g~i~i~d~~~~~~~~~~~~~~~~~~~v~~v~~~~ 283 (424)
++++..... ...+.........|+++|.+..++++-... +.|.++++..... .......-...+.|+|+|
T Consensus 479 v~d~dg~~~------~~l~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~~---~~l~~~~l~~PnGlavd~ 549 (699)
T 1n7d_A 479 VADTKGVKR------KTLFREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDI---YSLVTENIQWPNGITLDL 549 (699)
T ss_dssp EEBSSSCCE------EEECCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCCC---CEESCSSCSSCCCEEECT
T ss_pred EEecCCCce------EEEEeCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCCe---eEEEeCCCCCccEEEEec
Confidence 999865421 111111224567889999777777554333 7788887764331 111112234567899999
Q ss_pred CCCeEEEEEeCCCcEEEEECCCCCCcceEecC---CCCCEEEEEEcCCCCcEEEEEECCCeEEEeeCCCCCc
Q 014454 284 FNEWILATGSTDKTVKLFDLRKISTALHTFDS---HKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDE 352 (424)
Q Consensus 284 ~~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~~---h~~~v~~~~~sp~~~~~l~s~~~dg~i~iwd~~~~~~ 352 (424)
++.+++++-...+.|..+|+.. . ....+.. .-.....|++..+ .++++....+.|..++..++..
T Consensus 550 ~~~~LY~aD~~~~~I~~~d~dG-~-~~~~~~~~~~~~~~P~glavd~~--~lywtd~~~~~V~~~d~~~G~~ 617 (699)
T 1n7d_A 550 LSGRLYWVDSKLHSISSIDVNG-G-NRKTILEDEKRLAHPFSLAVFED--KVFWTDIINEAIFSANRLTGSD 617 (699)
T ss_dssp TTCCEEEEETTTTEEEEECSSS-S-CCEEECCCSSSCSSCCCCEEETT--EEEEECSTTTCEEEEETTTEEE
T ss_pred cCCEEEEEecCCCeEEEEccCC-C-ceEEEEecCCcCCCceEeEEECC--EEEEEeCCCCeEEEEEccCCCc
Confidence 8877777777778999999874 2 2222221 1123445666543 4677777778899998766543
No 282
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=97.95 E-value=0.0094 Score=58.26 Aligned_cols=229 Identities=7% Similarity=-0.034 Sum_probs=134.8
Q ss_pred CCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCceeEEEecCCCCceEEEEeCCCcEEEEeCCCCCCCCcccceeeeec
Q 014454 146 VSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKV 225 (424)
Q Consensus 146 ~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~ 225 (424)
....|+..++.... .....+...-..+.+|+|++.+..++.+=...+.|..++++..... ...+..
T Consensus 16 ~~~~I~~i~~~~~~---------~~~~~~~~~~~~~~~ld~~~~~~~ly~sD~~~~~I~r~~~~g~~~~-----~~v~~~ 81 (619)
T 3s94_A 16 NRRDLRLVDATNGK---------ENATIVVGGLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESV-----QNVVVS 81 (619)
T ss_dssp CSSBEEEECCC------------------CBCCSCEEEEEEETTTTEEEEEETTTTEEEEEEC-----C-----EEEECS
T ss_pred ccccEEEEeCCCCc---------ceEEEEEcCCCceEEEEEEeCCCEEEEEECCCCeEEEEEccCCCce-----EEEEeC
Confidence 35678888887510 0111122234457899999877644445445678888888654210 111222
Q ss_pred CCccEeeEEEecCCCcEEEEEeCCCeEEEEEcCCCCCCCCeeeeeccCCCeeEEEecCCCCeEEEEEe-CCCcEEEEECC
Q 014454 226 HEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATGS-TDKTVKLFDLR 304 (424)
Q Consensus 226 ~~~~v~~~~~~~~~~~~~~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~l~tg~-~dg~i~iwd~~ 304 (424)
.-.....+++.+.+..++.+-...+.|.+.++..... .......-.....|+++|.+.+++++-- ..+.|...++.
T Consensus 82 ~~~~P~GlAvD~~~~~ly~~d~~~~~I~v~~~dG~~~---~~l~~~~l~~P~~Iavdp~~g~ly~tD~g~~~~I~r~~~d 158 (619)
T 3s94_A 82 GLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLR---KVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMD 158 (619)
T ss_dssp SCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC---EEEECSSCSCCCCEEEETTTTEEEEEECSSSCEEEEEETT
T ss_pred CCCCcCeEEEEecCCEEEEEeCCCCEEEEEECCCCCE---EEEEeCCCCCCceEEEecCCCeEEEeccCCCCEEEEEECC
Confidence 2256889999998888888888889999999976432 1122233456788999998776666642 24577777766
Q ss_pred CCCCcceEecCCCCCEEEEEEcCCCCcEEEEEECCCeEEEeeCCCCCcccCCCCcCCCCCeeeEEEcCCCCCcceEEeCC
Q 014454 305 KISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPEDAEDGPPELLFIHGGHTSKISDFSWNP 384 (424)
Q Consensus 305 ~~~~~~~~~~~h~~~v~~~~~sp~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~ 384 (424)
. ..........-...+.|++++.+..++++-...+.|..+++....... + ..+......++++..
T Consensus 159 G-~~~~~l~~~~~~~P~Glald~~~~~LY~aD~~~~~I~~~~~dG~~~~~------------~--~~~~~~~P~gi~~~~ 223 (619)
T 3s94_A 159 G-SSRFIIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQA------------V--VKGSLPHPFALTLFE 223 (619)
T ss_dssp S-CSCEEEECSSCSSEEEEEEETTTTEEEEEETTTCCEEEESSSCCEEC-----------------------CCCEEESS
T ss_pred C-CceEEEEeCCCCCCcEEEEEccCCEEEEEeCCCCeEEEecCCCCccEE------------E--EeCCCCCceEEEEeC
Confidence 3 222222222345678999999876666666667788888886432111 1 111122245677765
Q ss_pred CCCcEEEEEeCCCcEEEEecCCcc
Q 014454 385 CEDWVISSVAEDNILQIWQMAENI 408 (424)
Q Consensus 385 ~~~~~l~s~~~dg~i~vw~~~~~~ 408 (424)
+ .++++-...+.|...+..++.
T Consensus 224 ~--~ly~td~~~~~V~~~d~~tg~ 245 (619)
T 3s94_A 224 D--ILYWTDWSTHSILACNKYTGE 245 (619)
T ss_dssp S--EEEEECTTTCSEEEEESSSCC
T ss_pred C--EEEEecCCCCEEEEEECCCCc
Confidence 5 366666667778888876653
No 283
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=97.93 E-value=0.00073 Score=63.05 Aligned_cols=159 Identities=9% Similarity=0.103 Sum_probs=100.5
Q ss_pred cEeeEEEec-CCCcEEEEEeCCCeEEEEEcCCCCCCCCeeeeeccCCCeeEEEecCCCCeEEEEEeCCC----cEEEEEC
Q 014454 229 VVEDVAWHL-RHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATGSTDK----TVKLFDL 303 (424)
Q Consensus 229 ~v~~~~~~~-~~~~~~~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~l~tg~~dg----~i~iwd~ 303 (424)
....|+++| ++..++++-.. +.|+.+|+.... +..+.........|+|++++..++++...++ .+.+++.
T Consensus 138 ~P~~lavdp~~~g~Lyv~d~~-~~I~~id~~~~~----v~~~~~~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~ 212 (430)
T 3tc9_A 138 GAVWLSFDPKNHNHLYLVGEQ-HPTRLIDFEKEY----VSTVYSGLSKVRTICWTHEADSMIITNDQNNNDRPNNYILTR 212 (430)
T ss_dssp CCCEEEEETTEEEEEEEEEBT-EEEEEEETTTTE----EEEEECCCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEG
T ss_pred CCCEEEECCCCCCeEEEEeCC-CcEEEEECCCCE----EEEEecCCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeC
Confidence 457889998 45567655443 889999987654 3333334566889999999986666654333 3444443
Q ss_pred CCCCCcceEecCCCCCEEEEEEcCCCCcEEEEEECCCeEEEeeCCCCCcccCCCCcCCCCCeeeEEEcCCCCCcceEEeC
Q 014454 304 RKISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPEDAEDGPPELLFIHGGHTSKISDFSWN 383 (424)
Q Consensus 304 ~~~~~~~~~~~~h~~~v~~~~~sp~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~ 383 (424)
.........+.. ......++++|+...++++-..++.|..++...... ..+..... ......++|+
T Consensus 213 ~g~~~~~~~l~~-~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~------------~~~~~~~~-~~~P~gia~~ 278 (430)
T 3tc9_A 213 ESGFKVITELTK-GQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQET------------TPLFTIQD-SGWEFHIQFH 278 (430)
T ss_dssp GGTSCSEEEEEE-CSSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEE------------EEEEECSS-SSCCEEEEEC
T ss_pred CCceeeeeeecc-CCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcE------------EEEEEcCC-CCcceeEEEc
Confidence 321111122221 234577899994445777766788999999875311 11222222 2346789999
Q ss_pred CCCCcEEEEEeCCCcEEEEecCC
Q 014454 384 PCEDWVISSVAEDNILQIWQMAE 406 (424)
Q Consensus 384 ~~~~~~l~s~~~dg~i~vw~~~~ 406 (424)
|++++++++-...+.|..++...
T Consensus 279 pdG~~lyv~d~~~~~I~~~~~d~ 301 (430)
T 3tc9_A 279 PSGNYAYIVVVNQHYILRSDYDW 301 (430)
T ss_dssp TTSSEEEEEETTTTEEEEEEEET
T ss_pred CCCCEEEEEECCCCEEEEEeCCc
Confidence 99997777777888999988763
No 284
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=97.91 E-value=0.0016 Score=63.04 Aligned_cols=157 Identities=12% Similarity=0.049 Sum_probs=82.3
Q ss_pred EEEEEeCCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCC-ceeEEEecC--CCCceEEEEeC------CCcEEEEeCCC
Q 014454 140 LIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHST-EGYGLSWSK--FKEGHLLSGSD------DAQICLWDINA 210 (424)
Q Consensus 140 ~latg~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~h~~-~v~~l~~~~--~~~~~l~s~~~------dg~i~iwd~~~ 210 (424)
.+.+++.++.|..+|..+ .+.......... ....+.-+| .+. .+++++. +|.|..+|..+
T Consensus 117 ~v~v~~~dg~l~alD~~t----------G~~~W~~~~~~~~~~~~~~~~P~v~~g-~v~vg~~~~~~~~~g~v~a~D~~t 185 (571)
T 2ad6_A 117 QIVKKQANGHLLALDAKT----------GKINWEVEVCDPKVGSTLTQAPFVAKD-TVLMGCSGAELGVRGAVNAFDLKT 185 (571)
T ss_dssp EEEEECTTSEEEEEETTT----------CCEEEEEECCCGGGTCBCCSCCEEETT-EEEEECBCGGGTCCCEEEEEETTT
T ss_pred EEEEEeCCCEEEEEECCC----------CCEEEEecCCCCCccceeccCCEEECC-EEEEEecCCccCCCCEEEEEECCC
Confidence 566677889999999876 333333321110 000111111 133 4555554 78999999998
Q ss_pred CCCCCcccceeee-ec-----------------------------C-Cc-cEeeEEEecCCCcEEEEEeCC---------
Q 014454 211 APKNKSLEAMQIF-KV-----------------------------H-EG-VVEDVAWHLRHEYLFGSVGDD--------- 249 (424)
Q Consensus 211 ~~~~~~~~~~~~~-~~-----------------------------~-~~-~v~~~~~~~~~~~~~~s~~~d--------- 249 (424)
++........... .. + .. ....+++.+....++ .+..+
T Consensus 186 G~~~W~~~~~~~~~~~~~~p~~~~~~~~~G~~~~g~~~w~~~~~~~gg~~~w~~~a~d~~~g~vy-~~~g~~~~~~~~~~ 264 (571)
T 2ad6_A 186 GELKWRAFATGSDDSVRLAKDFNSANPHYGQFGLGTKTWEGDAWKIGGGTNWGWYAYDPKLNLFY-YGSGNPAPWNETMR 264 (571)
T ss_dssp CCEEEEEESSSCHHHHTBCTTTTTTCGGGCCSSHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEE-EECCCCSCSCGGGS
T ss_pred CcEEEEEccCCCccccccCcccccccccccccccccccCcccceecCCCCeeeeEEEcCCCCeEE-EECCCCccccCCcc
Confidence 8653322111000 00 0 00 012356666655554 34321
Q ss_pred -------CeEEEEEcCCCCCCCCeeeeec--cC--------CCeeEEEecCCCC--eEEEEEeCCCcEEEEECCCCCCcc
Q 014454 250 -------QYLLIWDLRTPSVSKPVQSVVA--HQ--------SEVNCLAFNPFNE--WILATGSTDKTVKLFDLRKISTAL 310 (424)
Q Consensus 250 -------g~i~i~d~~~~~~~~~~~~~~~--~~--------~~v~~v~~~~~~~--~~l~tg~~dg~i~iwd~~~~~~~~ 310 (424)
+.|..+|.++++. +-.++. |. .++. +....+|+ .+++.++.+|.++++|..+ ++.+
T Consensus 265 ~gd~~y~~~v~Ald~~tG~~---~W~~~~~~~d~~d~~~~~~p~l-~~~~~~G~~~~~v~~~~~~G~l~~lD~~t-G~~~ 339 (571)
T 2ad6_A 265 PGDNKWTMTIWGRDLDTGMA---KWGYQKTPHDEWDFAGVNQMVL-TDQPVNGKMTPLLSHIDRNGILYTLNREN-GNLI 339 (571)
T ss_dssp CSCCTTTTEEEEEETTTCCE---EEEEESSTTCSSCCCCCCCCEE-EEEEETTEEEEEEEEECTTSEEEEEETTT-CCEE
T ss_pred CCCceeEEEEEEEecCCCcE---EEEecCCCCcccccccCCCCEE-EecccCCcEEEEEEEeCCCcEEEEEECCC-CCEE
Confidence 3699999998774 222221 11 2221 22223453 4677888999999999987 5555
Q ss_pred eEe
Q 014454 311 HTF 313 (424)
Q Consensus 311 ~~~ 313 (424)
..+
T Consensus 340 w~~ 342 (571)
T 2ad6_A 340 VAE 342 (571)
T ss_dssp EEE
T ss_pred eee
Confidence 443
No 285
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=97.90 E-value=0.0031 Score=58.78 Aligned_cols=206 Identities=12% Similarity=0.082 Sum_probs=117.7
Q ss_pred ceeEEEecCC-CCceEEEEeCCCcEEEEeCCCCCCCCcccceeeeecCCccEeeEEEecCCCcEEEEEeCC---Ce-EEE
Q 014454 180 EGYGLSWSKF-KEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDD---QY-LLI 254 (424)
Q Consensus 180 ~v~~l~~~~~-~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~d---g~-i~i 254 (424)
...+|+|.|+ ..+.|+.+...+.|+.+|+.++. +..+.........+++++++. ++++.... .. +..
T Consensus 140 ~P~gvavd~~s~~g~Lyv~D~~~~I~~id~~~g~-------v~~~~~~~~~P~giavd~dG~-lyVad~~~~~~~~gv~~ 211 (433)
T 4hw6_A 140 NIWRMMFDPNSNYDDLYWVGQRDAFRHVDFVNQY-------VDIKTTNIGQCADVNFTLNGD-MVVVDDQSSDTNTGIYL 211 (433)
T ss_dssp CCCEEEECTTTTTCEEEEECBTSCEEEEETTTTE-------EEEECCCCSCEEEEEECTTCC-EEEEECCSCTTSEEEEE
T ss_pred CCceEEEccccCCCEEEEEeCCCCEEEEECCCCE-------EEEeecCCCCccEEEECCCCC-EEEEcCCCCcccceEEE
Confidence 4568999985 22246666555899999986542 222222345688999999998 76554321 12 333
Q ss_pred EEcCCCCCCCCeeeeeccCCCeeEEEecCCCCeEEEEEeCCCcEEEEECCCCCCcceEe-c-CCCCCEEEEEEcCCCCcE
Q 014454 255 WDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATGSTDKTVKLFDLRKISTALHTF-D-SHKEEVFQVGWNPKNETI 332 (424)
Q Consensus 255 ~d~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~l~tg~~dg~i~iwd~~~~~~~~~~~-~-~h~~~v~~~~~sp~~~~~ 332 (424)
++..... .....+ ........++++|.+..++++-..++.|+.+|..+ +.....+ . .....-..++|+|++..+
T Consensus 212 ~~~~~~~--~~~~~~-~~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~-g~~~~~~~~~~~~~~~~~ia~dpdG~~L 287 (433)
T 4hw6_A 212 FTRASGF--TERLSL-CNARGAKTCAVHPQNGKIYYTRYHHAMISSYDPAT-GTLTEEEVMMDTKGSNFHIVWHPTGDWA 287 (433)
T ss_dssp ECGGGTT--CCEEEE-EECSSBCCCEECTTTCCEEECBTTCSEEEEECTTT-CCEEEEEEECSCCSSCEEEEECTTSSEE
T ss_pred EECCCCe--eccccc-cccCCCCEEEEeCCCCeEEEEECCCCEEEEEECCC-CeEEEEEeccCCCCCcccEEEeCCCCEE
Confidence 3332221 111111 12345677889994444666666678899999875 3331222 1 112233579999999756
Q ss_pred EEEEECCCeEEEeeCCCCCcccCCCCcCCCCCeeeEEE------------cCCCCCcceEEe---------CCCCCcEEE
Q 014454 333 LASCCLGRRLMVWDLSRIDEEQTPEDAEDGPPELLFIH------------GGHTSKISDFSW---------NPCEDWVIS 391 (424)
Q Consensus 333 l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~------------~~h~~~v~~~~~---------~~~~~~~l~ 391 (424)
+++-...+.|..+++........ .+..+.-. ...-.....+++ .+++. +++
T Consensus 288 Yvad~~~~~I~~~~~d~~~~~~~-------~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~~g~-lyv 359 (433)
T 4hw6_A 288 YIIYNGKHCIYRVDYNRETGKLA-------VPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEEDEYD-FYF 359 (433)
T ss_dssp EEEETTTTEEEEEEBCTTTCCBC-------CCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSSCCEE-EEE
T ss_pred EEEeCCCCEEEEEeCCCCCcccC-------cEEEEEecCCCCccCCCcccceEEcCCccEEEEccccccccCCCCc-EEE
Confidence 66666778899988653211000 00000000 001123566888 66666 677
Q ss_pred EEeCCCcEEEEecC
Q 014454 392 SVAEDNILQIWQMA 405 (424)
Q Consensus 392 s~~~dg~i~vw~~~ 405 (424)
+-...++|+.++..
T Consensus 360 aD~~n~~I~~~~~~ 373 (433)
T 4hw6_A 360 CDRDSHTVRVLTPE 373 (433)
T ss_dssp EETTTTEEEEECTT
T ss_pred EECCCCEEEEECCC
Confidence 76677889888864
No 286
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=97.87 E-value=0.0023 Score=56.36 Aligned_cols=207 Identities=10% Similarity=0.073 Sum_probs=117.0
Q ss_pred CceeEEEecCCCCcEEEEEeCCCeEEEEeCCCCCCCCCCCCCCCCcEEEec----CC--CceeEEEe---cCCCCceEEE
Q 014454 126 GEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRG----HS--TEGYGLSW---SKFKEGHLLS 196 (424)
Q Consensus 126 ~~v~~~~~~p~~~~~latg~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~----h~--~~v~~l~~---~~~~~~~l~s 196 (424)
-...+++|.+....++++.-..|+|..|+.... ..... .+.+ .. ..+.+|.| .|.+. ++++
T Consensus 13 ~yPE~~~wd~~~g~~~vs~l~~g~V~~~~~~~~--------~~~~~-~~~~~s~~g~~~~~~sGl~~~~~D~~gr-L~vv 82 (334)
T 2p9w_A 13 LTPEDTIYDRTRQVFYQSNLYKGRIEVYNPKTQ--------SHFNV-VIDGASSNGDGEQQMSGLSLLTHDNSKR-LFAV 82 (334)
T ss_dssp CCCSCEEEETTTTEEEEEETTTTEEEEECTTTC--------CEEEE-CCTTTCCSSCCSEEEEEEEESSSSSCCE-EEEE
T ss_pred cCCcCccCcCCCCEEEEEeccCCEEEEEcCCCC--------eEEEE-ecCCccccCCCcceeeEEEEeccCCCCc-EEEE
Confidence 344578998866656666557899999998641 01101 1111 01 13578999 57644 5554
Q ss_pred Ee-------------CCCcEEEEeCC---CCCCCCcccceeeeec-------CCccEeeEEEecCCCcEEEEEeCC-CeE
Q 014454 197 GS-------------DDAQICLWDIN---AAPKNKSLEAMQIFKV-------HEGVVEDVAWHLRHEYLFGSVGDD-QYL 252 (424)
Q Consensus 197 ~~-------------~dg~i~iwd~~---~~~~~~~~~~~~~~~~-------~~~~v~~~~~~~~~~~~~~s~~~d-g~i 252 (424)
.. .+..|..+|+. +++............+ -....++++..++|+ .+++++.. +.|
T Consensus 83 ~~~~~af~~~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~Gn-aYVt~s~~~~~I 161 (334)
T 2p9w_A 83 MKNAKSFNFADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGN-SYVAFALGMPAI 161 (334)
T ss_dssp EEETTTTCTTSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSC-EEEEEEESSCEE
T ss_pred EcccccccccccccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCC-EEEeCCCCCCeE
Confidence 33 26779999998 5543322110000001 113588999999986 56678777 777
Q ss_pred EEEEcCCCCCCCCeeeee------ccCCCeeEEEecCCCCeEEEEEeCCCcEEEEECCCCCCcceEec--CC---CCCEE
Q 014454 253 LIWDLRTPSVSKPVQSVV------AHQSEVNCLAFNPFNEWILATGSTDKTVKLFDLRKISTALHTFD--SH---KEEVF 321 (424)
Q Consensus 253 ~i~d~~~~~~~~~~~~~~------~~~~~v~~v~~~~~~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~--~h---~~~v~ 321 (424)
..++..... +..+. ......+.|+++|++..+++..+ .|.+..+|++.+........ +. -....
T Consensus 162 ~rV~pdG~~----~~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~-~g~L~~fD~~~pv~~~v~~~~~G~~~~~~~~d 236 (334)
T 2p9w_A 162 ARVSADGKT----VSTFAWESGNGGQRPGYSGITFDPHSNKLIAFGG-PRALTAFDVSKPYAWPEPVKINGDFGTLSGTE 236 (334)
T ss_dssp EEECTTSCC----EEEEEECCCCSSSCCSCSEEEEETTTTEEEEESS-SSSEEEEECSSSSCCCEECEESSCCCCCTTEE
T ss_pred EEEeCCCCE----EeeeeecCCCcccccCcceEEEeCCCCEEEEEcC-CCeEEEEcCCCCcceeecccccCCcccccCcc
Confidence 777665432 22111 11234679999999986555555 99999999985322001111 21 12233
Q ss_pred EE-EEcCCCCcEEEEEECCCeEEEeeCC
Q 014454 322 QV-GWNPKNETILASCCLGRRLMVWDLS 348 (424)
Q Consensus 322 ~~-~~sp~~~~~l~s~~~dg~i~iwd~~ 348 (424)
.+ .--.+|..+|++....+.+.+.+..
T Consensus 237 gilp~~~~G~vllV~~~~~~~~~l~S~D 264 (334)
T 2p9w_A 237 KIVTVPVGNESVLVGARAPYAISFRSWD 264 (334)
T ss_dssp EEEEEEETTEEEEEEEETTEEEEEECSS
T ss_pred cccccccCCEEEEEEcCCCCEEEEECCC
Confidence 43 3333564446666666665555543
No 287
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=97.79 E-value=0.016 Score=52.24 Aligned_cols=240 Identities=10% Similarity=0.051 Sum_probs=121.4
Q ss_pred CceeEEEecCCCCcEEEEEeCCCeEEEEeCCCCCCCCCCCCCCCCcEEE---ecCCCceeEEEecCC---CCceEEEEeC
Q 014454 126 GEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRL---RGHSTEGYGLSWSKF---KEGHLLSGSD 199 (424)
Q Consensus 126 ~~v~~~~~~p~~~~~latg~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~---~~h~~~v~~l~~~~~---~~~~l~s~~~ 199 (424)
.....++|.|++. ++++ ...|.|++++ .. .......+ .........|+++|+ +..+.++-..
T Consensus 31 ~~P~~ia~~pdG~-l~V~-e~~g~I~~i~-~g---------~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~ 98 (352)
T 2ism_A 31 EVPWALAFLPDGG-MLIA-ERPGRIRLFR-EG---------RLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTV 98 (352)
T ss_dssp SCEEEEEECTTSC-EEEE-ETTTEEEEEE-TT---------EEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEE
T ss_pred CCceEEEEcCCCe-EEEE-eCCCeEEEEE-CC---------CccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEec
Confidence 4567899999986 5554 5669999998 32 11111111 112346789999997 4433333332
Q ss_pred C-----CcEEEEeCCCCCCCCcccc-eeeee---cCCccEeeEEEecCCCcEEEEEeC-------------CCeEEEEEc
Q 014454 200 D-----AQICLWDINAAPKNKSLEA-MQIFK---VHEGVVEDVAWHLRHEYLFGSVGD-------------DQYLLIWDL 257 (424)
Q Consensus 200 d-----g~i~iwd~~~~~~~~~~~~-~~~~~---~~~~~v~~~~~~~~~~~~~~s~~~-------------dg~i~i~d~ 257 (424)
. +.|..++...... ...+. +..+. ........++|.|++. ++++.+. .|.|.-++.
T Consensus 99 ~~~~~~~~v~r~~~~~~~~-~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~-Lyv~~G~~~~~~~~~d~~~~~g~I~ri~~ 176 (352)
T 2ism_A 99 AEGGLRNQVVRLRHLGERG-VLDRVVLDGIPARPHGLHSGGRIAFGPDGM-LYVTTGEVYERELAQDLASLGGKILRLTP 176 (352)
T ss_dssp CTTSSEEEEEEEEECSSCE-EEEEEEEEEECCCTTCCCCCCCEEECTTSC-EEEECCCTTCGGGGGCTTCSSSEEEEECT
T ss_pred CCCCCccEEEEEEeCCCCc-CceEEEEEeCCCCCCCCcCCceEEECCCCC-EEEEECCCCCCccccCCCCCceEEEEEcC
Confidence 2 5677787763211 11111 11122 1112346899999985 6555432 256666665
Q ss_pred CCCC-----------CCCCeeeeeccCCCeeEEEecC-CCCeEEEEEeCCCc--------EEEEECCC------------
Q 014454 258 RTPS-----------VSKPVQSVVAHQSEVNCLAFNP-FNEWILATGSTDKT--------VKLFDLRK------------ 305 (424)
Q Consensus 258 ~~~~-----------~~~~~~~~~~~~~~v~~v~~~~-~~~~~l~tg~~dg~--------i~iwd~~~------------ 305 (424)
...- ....+.. .++ .....++|+| .+. ++++-..... |.+...-.
T Consensus 177 dG~~p~~npf~~~~~~~~~i~a-~G~-rnp~g~a~d~~~g~-l~v~d~g~~~~~~~~~dei~~i~~G~nyGwp~~~g~~~ 253 (352)
T 2ism_A 177 EGEPAPGNPFLGRRGARPEVYS-LGH-RNPQGLAWHPKTGE-LFSSEHGPSGEQGYGHDEVNLIVPGGNYGWPRVVGRGN 253 (352)
T ss_dssp TSSBCTTCTTTTCTTSCTTEEE-ECC-SEECCCEECTTTCC-EEEEEECC------CCCEEEEECTTCBCCTTTCCSCCC
T ss_pred CCCCCCCCcccCCCCCCccEEE-EcC-CCcccEEEECCCCC-EEEEEcCCCCCCCCCCeEEEEeccCCcCCCCcccCCCC
Confidence 4310 0001111 122 2356789999 555 5554333222 44332111
Q ss_pred ---CCCcceEecCCCCCEEEEEEcCCCCcEEEEEECCCeEEEeeCCCCCcccCCCCcCCCCCeeeEEEcCCCCCcceEEe
Q 014454 306 ---ISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPEDAEDGPPELLFIHGGHTSKISDFSW 382 (424)
Q Consensus 306 ---~~~~~~~~~~h~~~v~~~~~sp~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~ 382 (424)
...++..+.. ......++|. ++ .++++.-..+.|...++......... ......+. -...+.++++
T Consensus 254 ~~~~~~p~~~~~~-~~ap~G~~~~-~G-~l~v~~~~~~~v~~v~~~~~~~~~~~-------~~~~~~~~-~~~rp~~v~~ 322 (352)
T 2ism_A 254 DPRYRDPLYFWPQ-GFPPGNLAFF-RG-DLYVAGLRGQALLRLVLEGERGRWRV-------LRVETALS-GFGRLREVQV 322 (352)
T ss_dssp CTTSCCCSEECTT-CCCEEEEEEE-TT-EEEEEETTTTEEEEEEEEEETTEEEE-------EEEEEEEE-SSCCEEEEEE
T ss_pred CCCCcCCeEecCC-CCCCcceEEE-CC-EEEEEECCCCEEEEEEECCCCcceee-------cchheecc-cCCCeeEEEE
Confidence 0123444432 3456778883 45 46666666677777776543210000 00011112 2356899999
Q ss_pred CCCCCcEEEEEe
Q 014454 383 NPCEDWVISSVA 394 (424)
Q Consensus 383 ~~~~~~~l~s~~ 394 (424)
.|+|. ++++..
T Consensus 323 ~pdG~-lyv~~~ 333 (352)
T 2ism_A 323 GPDGA-LYVTTS 333 (352)
T ss_dssp CTTSC-EEEEEC
T ss_pred CCCCc-EEEEEe
Confidence 99998 555543
No 288
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=97.77 E-value=0.0065 Score=60.12 Aligned_cols=54 Identities=6% Similarity=-0.000 Sum_probs=37.0
Q ss_pred CCcEEEEECCCCCCcceEecCCCCCEEEEEEcCCCCcEEEEEECCCeEEEeeCCCCC
Q 014454 295 DKTVKLFDLRKISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRID 351 (424)
Q Consensus 295 dg~i~iwd~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~l~s~~~dg~i~iwd~~~~~ 351 (424)
+|.|..||+++ ++.+-....+ .++....+...+. +++.++.|+.++.||.+++.
T Consensus 437 ~g~l~A~D~~t-G~~~W~~~~~-~~~~~~~~~t~gg-~vf~g~~dg~l~a~d~~tG~ 490 (668)
T 1kv9_A 437 SGALLAWDPVK-QKAAWKVPYP-THWNGGTLSTAGN-LVFQGTAAGQMHAYSADKGE 490 (668)
T ss_dssp EEEEEEEETTT-TEEEEEEEES-SSCCCCEEEETTT-EEEEECTTSEEEEEETTTCC
T ss_pred cceEEEEeCCC-CcEEEEccCC-CCCcCceeEeCCC-EEEEECCcccchhhhhhcCh
Confidence 47899999988 5655555432 2333333444454 67788999999999998864
No 289
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=97.75 E-value=0.0068 Score=58.70 Aligned_cols=54 Identities=17% Similarity=0.040 Sum_probs=35.1
Q ss_pred CCcEEEEECCCCCCcceEecCCCCCEEEEEEcCCCCcEEEEEECCCeEEEeeCCCCC
Q 014454 295 DKTVKLFDLRKISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRID 351 (424)
Q Consensus 295 dg~i~iwd~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~l~s~~~dg~i~iwd~~~~~ 351 (424)
+|.|..||+.+ ++.+-++... ..+.+......+. +++.++.||.|+.||.++++
T Consensus 443 ~g~l~a~D~~t-G~~~W~~~~~-~~~~~~~~~t~gg-~v~~g~~dg~l~a~D~~tG~ 496 (571)
T 2ad6_A 443 MGQIRAFDLTT-GKAKWTKWEK-FAAWGGTLYTKGG-LVWYATLDGYLKALDNKDGK 496 (571)
T ss_dssp CEEEEEECTTT-CCEEEEEEES-SCCCSBCEEETTT-EEEEECTTSEEEEEETTTCC
T ss_pred CCeEEEEECCC-CCEEEEecCC-CCccceeEEECCC-EEEEEcCCCeEEEEECCCCC
Confidence 57899999987 5555555432 2222222222343 56678999999999998864
No 290
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=97.73 E-value=0.00032 Score=69.45 Aligned_cols=234 Identities=6% Similarity=-0.095 Sum_probs=115.8
Q ss_pred eeEEEecCCCCcEEEEEe-CCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCceeEEEecCCCCceEEEEe-CC-----
Q 014454 128 VNRARYMPQNPFLIATKT-VSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGS-DD----- 200 (424)
Q Consensus 128 v~~~~~~p~~~~~latg~-~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~-~d----- 200 (424)
..++++.+++. +++.|+ .+..+.+||..+ ..+.....+.. ...-.+++..+++. +++.|+ .+
T Consensus 245 ~~~~~~~~~g~-lyv~GG~~~~~v~~yd~~t--------~~W~~~~~~~~-~R~~~s~~~~~dg~-iyv~GG~~~~~~~~ 313 (656)
T 1k3i_A 245 CPGISMDGNGQ-IVVTGGNDAKKTSLYDSSS--------DSWIPGPDMQV-ARGYQSSATMSDGR-VFTIGGSWSGGVFE 313 (656)
T ss_dssp SCEEEECTTSC-EEEECSSSTTCEEEEEGGG--------TEEEECCCCSS-CCSSCEEEECTTSC-EEEECCCCCSSSCC
T ss_pred cccccCCCCCC-EEEeCCCCCCceEEecCcC--------CceeECCCCCc-cccccceEEecCCe-EEEEeCcccCCccc
Confidence 33466777776 777777 456899999876 22222211111 11123445556676 677777 34
Q ss_pred CcEEEEeCCCCCCCCcccce-----eeeecCCccEeeEEEecCCCcEEEEEeCC---------CeEEEEEcCCCCCCCCe
Q 014454 201 AQICLWDINAAPKNKSLEAM-----QIFKVHEGVVEDVAWHLRHEYLFGSVGDD---------QYLLIWDLRTPSVSKPV 266 (424)
Q Consensus 201 g~i~iwd~~~~~~~~~~~~~-----~~~~~~~~~v~~~~~~~~~~~~~~s~~~d---------g~i~i~d~~~~~~~~~~ 266 (424)
..+.+||..+..- ..+ ..+..... ...+..++ .+++.++.+ ..+..||..+.....+.
T Consensus 314 ~~~e~yd~~t~~W----~~~~~~~~~p~~~~~~---~~~~~~~~-~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~~ 385 (656)
T 1k3i_A 314 KNGEVYSPSSKTW----TSLPNAKVNPMLTADK---QGLYRSDN-HAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSA 385 (656)
T ss_dssp CCEEEEETTTTEE----EEETTSCSGGGCCCCT---TGGGTTTC-SCCEEECGGGCEEECCSSSEEEEEECSTTCEEEEE
T ss_pred ccceEeCCCCCcc----eeCCCccccccccccc---cceeecCC-ceEEEECCCCcEEEecCccceeeeecCCcceeecC
Confidence 5689999876421 111 00000000 01111222 344455444 45678888775421111
Q ss_pred eeeec------cCCCeeEEEecCCCCeEEEEEeCCC-----------cEEEEECCCCCCcceEe--cCCCCC-EEEEEEc
Q 014454 267 QSVVA------HQSEVNCLAFNPFNEWILATGSTDK-----------TVKLFDLRKISTALHTF--DSHKEE-VFQVGWN 326 (424)
Q Consensus 267 ~~~~~------~~~~v~~v~~~~~~~~~l~tg~~dg-----------~i~iwd~~~~~~~~~~~--~~h~~~-v~~~~~s 326 (424)
..... ....-.++.|...+..+++.|+.++ .|.+||..+. .-.... ..+... -.+++..
T Consensus 386 ~~~~~~~~~~~~~~~~~av~~~~~~~~i~v~GG~~~~~~~~~~~~~~~v~~yd~~~~-~W~~~~~~~mp~~R~~~~~~~l 464 (656)
T 1k3i_A 386 GKRQSNRGVAPDAMCGNAVMYDAVKGKILTFGGSPDYQDSDATTNAHIITLGEPGTS-PNTVFASNGLYFARTFHTSVVL 464 (656)
T ss_dssp EECEETTEECCCCBTCEEEEEETTTTEEEEECCBSSSSSSBCCCCEEEEECCSTTSC-CEEEECTTCCSSCCBSCEEEEC
T ss_pred CccccccccCCCCCCCceEeccCCCCeEEEEeCCCCCCCCCcCCcceEEEcCCCCCC-CeeEEccCCCCCCcccCCeEEC
Confidence 11110 0112345555444455888888542 5778887652 211111 112222 2345667
Q ss_pred CCCCcEEEEEECC-----------CeEEEeeCCCCCcccCCCCcCCCCCeeeEEEcCCCCCcceEEeCCCCCcEEEEEeC
Q 014454 327 PKNETILASCCLG-----------RRLMVWDLSRIDEEQTPEDAEDGPPELLFIHGGHTSKISDFSWNPCEDWVISSVAE 395 (424)
Q Consensus 327 p~~~~~l~s~~~d-----------g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~ 395 (424)
|++. +++.|+.+ ..+.+||..+..-.. +..............+.|+++ +++.||.
T Consensus 465 ~~g~-i~v~GG~~~~~~~~~~~~~~~v~~ydp~t~~W~~------------~~~~~~~R~~hs~a~ll~dg~-v~v~GG~ 530 (656)
T 1k3i_A 465 PDGS-TFITGGQRRGIPFEDSTPVFTPEIYVPEQDTFYK------------QNPNSIVRVYHSISLLLPDGR-VFNGGGG 530 (656)
T ss_dssp TTSC-EEEECCBSBCCTTCCCSBCCCCEEEEGGGTEEEE------------CCCCSSCCCTTEEEEECTTSC-EEEEECC
T ss_pred CCCC-EEEECCcccCcCcCCCCcccceEEEcCCCCceee------------cCCCCCccccccHhhcCCCcE-EEecCCC
Confidence 7885 78888754 457888886532111 000011111122345678898 7888774
No 291
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=97.70 E-value=0.017 Score=55.95 Aligned_cols=59 Identities=10% Similarity=-0.024 Sum_probs=36.7
Q ss_pred CeEEEEEcCCCCCCCCeeeee--ccC--------CCeeEEEec-CCCC--eEEEEEeCCCcEEEEECCCCCCcceEe
Q 014454 250 QYLLIWDLRTPSVSKPVQSVV--AHQ--------SEVNCLAFN-PFNE--WILATGSTDKTVKLFDLRKISTALHTF 313 (424)
Q Consensus 250 g~i~i~d~~~~~~~~~~~~~~--~~~--------~~v~~v~~~-~~~~--~~l~tg~~dg~i~iwd~~~~~~~~~~~ 313 (424)
+.|..+|.++++. +-.++ .|. .++. +... .+|+ .+++.++.+|.++++|.++ ++++..+
T Consensus 291 ~~v~AlD~~TG~~---~W~~q~~~~d~wd~~~~~~p~l-~~~~~~~G~~~~~v~~~~~~G~l~~lD~~t-G~~lw~~ 362 (582)
T 1flg_A 291 SGQVGVDPSSGEV---KWFYQHTPNDAWDFSGNNELVL-FDYKAKDGKIVKATAHADRNGFFYVVDRSN-GKLQNAF 362 (582)
T ss_dssp SEEEEECTTTCCE---EEEEESSTTCCSCCCCCCCCEE-EEEECSSSCEEEEEEEECTTSEEEEEETTT-CCEEEEE
T ss_pred ceEEEEeCCCCCE---EEEEeCCCCCcccccCCCCcEE-EeeecCCCCEEEEEEEECCCceEEEEECCC-CCEeccc
Confidence 6899999999875 22222 121 1221 2221 3453 3688899999999999987 5555443
No 292
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=97.70 E-value=0.00071 Score=63.57 Aligned_cols=171 Identities=12% Similarity=0.094 Sum_probs=102.4
Q ss_pred cEeeEEEec-CCCcEEEEEeCCCeEEEEEcCCCCCCCCeeeeec----cCCCeeEEEe-------cCCCCeEEEEEeCCC
Q 014454 229 VVEDVAWHL-RHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVA----HQSEVNCLAF-------NPFNEWILATGSTDK 296 (424)
Q Consensus 229 ~v~~~~~~~-~~~~~~~s~~~dg~i~i~d~~~~~~~~~~~~~~~----~~~~v~~v~~-------~~~~~~~l~tg~~dg 296 (424)
....|+|+| ++.+|+++....+.|++.|+..+.. ..+.. .......|+| ++++.+++++-..++
T Consensus 140 ~p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v----~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~ 215 (496)
T 3kya_A 140 DNGRLAFDPLNKDHLYICYDGHKAIQLIDLKNRML----SSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDG 215 (496)
T ss_dssp SEEEEEEETTEEEEEEEEEETEEEEEEEETTTTEE----EEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCT
T ss_pred CCCEEEEccCCCCEEEEEECCCCeEEEEECCCCEE----EEEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCCC
Confidence 467899998 4667877766667899999987653 22221 1235789999 999986565554442
Q ss_pred ------cEEEEECCCCCCcc-----eEecCCCCCEEEEEEcCCCCcEEEEEECCCeEEEeeCC-------CCCcccCCCC
Q 014454 297 ------TVKLFDLRKISTAL-----HTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLS-------RIDEEQTPED 358 (424)
Q Consensus 297 ------~i~iwd~~~~~~~~-----~~~~~h~~~v~~~~~sp~~~~~l~s~~~dg~i~iwd~~-------~~~~~~~~~~ 358 (424)
.|.+++....+... ..+.. -.....++.+|++..++++-..++.|..+|+. .+..-.....
T Consensus 216 ~~~~~~~V~~i~r~~~G~~~~~~~~~~v~~-~~~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~ 294 (496)
T 3kya_A 216 KGDESPSVYIIKRNADGTFDDRSDIQLIAA-YKQCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVK 294 (496)
T ss_dssp TGGGEEEEEEEECCTTSCCSTTSCEEEEEE-ESCCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGG
T ss_pred CcccCceEEEEecCCCCceeecccceeecc-CCCceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeeccccc
Confidence 37777633311211 22221 12446788999766777777788899999987 3221000000
Q ss_pred cCCCCCeeeEEEcCCCCCcceEEeCCCCCcEEEEEeCCCcEEEEecC
Q 014454 359 AEDGPPELLFIHGGHTSKISDFSWNPCEDWVISSVAEDNILQIWQMA 405 (424)
Q Consensus 359 ~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~vw~~~ 405 (424)
...+....++.. +.....+.++|+|++..++++-.....|+.+++.
T Consensus 295 ~~~g~~~~l~~~-~~~~~p~~ia~~p~G~~lYvaD~~~h~I~kid~d 340 (496)
T 3kya_A 295 NNPNTFKQLFTI-ADPSWEFQIFIHPTGKYAYFGVINNHYFMRSDYD 340 (496)
T ss_dssp GCTTTEEEEEEC-SSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEE
T ss_pred ccccccceeEec-CCCCCceEEEEcCCCCEEEEEeCCCCEEEEEecC
Confidence 000000122222 2234467899999999666666677888886653
No 293
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=97.64 E-value=0.02 Score=50.91 Aligned_cols=191 Identities=9% Similarity=0.156 Sum_probs=115.4
Q ss_pred eEEEEeCCCcEEEEeCCCCCCCCcccceeeeecCCccEeeEEEecC----CC---cEEEEEeC--CCeEEEEEcCCCCCC
Q 014454 193 HLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLR----HE---YLFGSVGD--DQYLLIWDLRTPSVS 263 (424)
Q Consensus 193 ~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~----~~---~~~~s~~~--dg~i~i~d~~~~~~~ 263 (424)
+++.....+-+.+||+ +++ .+..+. .+.++.+..-|. ++ ..+++.-. +++|.+|++.....
T Consensus 42 ~ii~t~k~~gL~Vydl-~G~------~l~~~~--~g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~- 111 (355)
T 3amr_A 42 KLITTNKKSGLVVYSL-DGK------MLHSYN--TGKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNG- 111 (355)
T ss_dssp EEEEEETTTEEEEEET-TSC------EEEEEC--CSCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTTC-
T ss_pred EEEEEcCCCCEEEEcC-CCc------EEEEcc--CCCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCCC-
Confidence 5777778889999999 442 223332 245666666552 11 22444444 68999998742211
Q ss_pred CCeeeeec------cC-CCeeEEEe--cCC-CCeEEEEEeCCCcEEEEECCCC------CCcceEecCCCCCEEEEEEcC
Q 014454 264 KPVQSVVA------HQ-SEVNCLAF--NPF-NEWILATGSTDKTVKLFDLRKI------STALHTFDSHKEEVFQVGWNP 327 (424)
Q Consensus 264 ~~~~~~~~------~~-~~v~~v~~--~~~-~~~~l~tg~~dg~i~iwd~~~~------~~~~~~~~~h~~~v~~~~~sp 327 (424)
++..+.. .. ..+..+++ +|. +..++++...+|.+..|++... .+.++++.. .+.+-.+...+
T Consensus 112 -~l~~i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~l-gsq~EgcvvDd 189 (355)
T 3amr_A 112 -TLQSMTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFKM-NSQTEGMAADD 189 (355)
T ss_dssp -CEEECSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEEC-SSCEEEEEEET
T ss_pred -ceeeccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEecC-CCCcceEEEcC
Confidence 2333311 11 45666777 664 4445777778899999998421 245666665 46788899988
Q ss_pred CCCcEEEEEECCCeEEEeeCCCCCcccCCCCcCCCCCeeeEEEc-CC-CCCcceEEe--CCCCC-cEEEEEeCCCcEEEE
Q 014454 328 KNETILASCCLGRRLMVWDLSRIDEEQTPEDAEDGPPELLFIHG-GH-TSKISDFSW--NPCED-WVISSVAEDNILQIW 402 (424)
Q Consensus 328 ~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~-~h-~~~v~~~~~--~~~~~-~~l~s~~~dg~i~vw 402 (424)
... .|+.+-.+.-|..++...... ....++.... ++ ...+..+++ .++++ |+|+|+-.++.+.||
T Consensus 190 ~~g-~Lyv~eEd~GIw~~da~p~~~---------~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQG~~s~~Vy 259 (355)
T 3amr_A 190 EYG-RLYIAEEDEAIWKFSAEPDGG---------SNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQGNSSYAIY 259 (355)
T ss_dssp TTT-EEEEEETTTEEEEEECSTTSC---------SCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEGGGTEEEEE
T ss_pred CCC-eEEEecccceEEEEeCCcCCC---------CCceEEEEecCCccccCcceEEEEecCCCCEEEEEEcCCCCEEEEE
Confidence 775 577888886555555432110 0113343332 22 235777877 55556 678887678899999
Q ss_pred ecC
Q 014454 403 QMA 405 (424)
Q Consensus 403 ~~~ 405 (424)
+..
T Consensus 260 dr~ 262 (355)
T 3amr_A 260 DRQ 262 (355)
T ss_dssp ESS
T ss_pred ECC
Confidence 996
No 294
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=97.58 E-value=0.015 Score=51.28 Aligned_cols=162 Identities=11% Similarity=0.128 Sum_probs=101.4
Q ss_pred EecCCCceeEEEecCCCCceEEEEe-CCCcEEEEeCCCCCCCCcccceeeeec------CCccEeeEEE---ecCCCcEE
Q 014454 174 LRGHSTEGYGLSWSKFKEGHLLSGS-DDAQICLWDINAAPKNKSLEAMQIFKV------HEGVVEDVAW---HLRHEYLF 243 (424)
Q Consensus 174 ~~~h~~~v~~l~~~~~~~~~l~s~~-~dg~i~iwd~~~~~~~~~~~~~~~~~~------~~~~v~~~~~---~~~~~~~~ 243 (424)
+.....-.-+++|.+... .|..++ ..++|..|+...+... .+ .+.. ....+..|.| .|.+ .|+
T Consensus 8 ~~~~~~yPE~~~wd~~~g-~~~vs~l~~g~V~~~~~~~~~~~----~~-~~~~~s~~g~~~~~~sGl~~~~~D~~g-rL~ 80 (334)
T 2p9w_A 8 VKVKNLTPEDTIYDRTRQ-VFYQSNLYKGRIEVYNPKTQSHF----NV-VIDGASSNGDGEQQMSGLSLLTHDNSK-RLF 80 (334)
T ss_dssp ECCTTCCCSCEEEETTTT-EEEEEETTTTEEEEECTTTCCEE----EE-CCTTTCCSSCCSEEEEEEEESSSSSCC-EEE
T ss_pred ecCcccCCcCccCcCCCC-EEEEEeccCCEEEEEcCCCCeEE----EE-ecCCccccCCCcceeeEEEEeccCCCC-cEE
Confidence 344444456789988666 455555 7999999998644211 11 1111 1124689999 5775 466
Q ss_pred EEEe-------------CCCeEEEEEcC---CCCCCCCeeeee--c-----------cCCCeeEEEecCCCCeEEEEEeC
Q 014454 244 GSVG-------------DDQYLLIWDLR---TPSVSKPVQSVV--A-----------HQSEVNCLAFNPFNEWILATGST 294 (424)
Q Consensus 244 ~s~~-------------~dg~i~i~d~~---~~~~~~~~~~~~--~-----------~~~~v~~v~~~~~~~~~l~tg~~ 294 (424)
++.. .+..|..||+. +++. +.... . -......++..++|. ..++++.
T Consensus 81 vv~~~~~af~~~g~~~~g~~~v~~~Dl~~~~tg~~---~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~Gn-aYVt~s~ 156 (334)
T 2p9w_A 81 AVMKNAKSFNFADQSSHGASSFHSFNLPLSENSKP---VWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGN-SYVAFAL 156 (334)
T ss_dssp EEEEETTTTCTTSCCSSSCCEEEEEESSCCTTCCC---SEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSC-EEEEEEE
T ss_pred EEEcccccccccccccCCCCEEEEEcCCcCCCCCE---EEEecCccccccccccccccccCCceeEECCCCC-EEEeCCC
Confidence 5433 26789999998 5553 22221 1 112478999999987 6777877
Q ss_pred C-CcEEEEECCCCCCcceEec------CCCCCEEEEEEcCCCCcEEEEEECCCeEEEeeCCC
Q 014454 295 D-KTVKLFDLRKISTALHTFD------SHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSR 349 (424)
Q Consensus 295 d-g~i~iwd~~~~~~~~~~~~------~h~~~v~~~~~sp~~~~~l~s~~~dg~i~iwd~~~ 349 (424)
. +.|..++... +.+..+. ......+.|+++|++.. |++....|.+..+|+..
T Consensus 157 ~~~~I~rV~pdG--~~~~~~~~~~~~~~~~~G~nGIv~~pdg~~-Liv~~~~g~L~~fD~~~ 215 (334)
T 2p9w_A 157 GMPAIARVSADG--KTVSTFAWESGNGGQRPGYSGITFDPHSNK-LIAFGGPRALTAFDVSK 215 (334)
T ss_dssp SSCEEEEECTTS--CCEEEEEECCCCSSSCCSCSEEEEETTTTE-EEEESSSSSEEEEECSS
T ss_pred CCCeEEEEeCCC--CEEeeeeecCCCcccccCcceEEEeCCCCE-EEEEcCCCeEEEEcCCC
Confidence 7 7777776653 2233221 11234679999999975 44444499999999883
No 295
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=97.56 E-value=0.039 Score=53.52 Aligned_cols=81 Identities=6% Similarity=0.066 Sum_probs=46.7
Q ss_pred CCcEEEEECCCCCCcceEecCCCCCEEEEEEcCCCCcEEEEEECCCeEEEeeCCCCCcccCCCCcCCCCCeeeEEEcCCC
Q 014454 295 DKTVKLFDLRKISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPEDAEDGPPELLFIHGGHT 374 (424)
Q Consensus 295 dg~i~iwd~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~ 374 (424)
+|.|..||+++ ++.+-+.... .++..-.....+. +++.++.||.++.||.++++ .+..+....
T Consensus 465 ~G~l~A~D~~t-G~~~W~~~~~-~~~~~g~~~tagg-lvf~g~~dg~l~A~D~~tG~--------------~lW~~~~~~ 527 (582)
T 1flg_A 465 VGSLRAMDPVS-GKVVWEHKEH-LPLWAGVLATAGN-LVFTGTGDGYFKAFDAKSGK--------------ELWKFQTGS 527 (582)
T ss_dssp SEEEEEECTTT-CCEEEEEEES-SCCCSCCEEETTT-EEEEECTTSEEEEEETTTCC--------------EEEEEECSS
T ss_pred cceEEEEECCC-CCEEEEecCC-CCCcccceEeCCC-EEEEECCCCcEEEEECCCCC--------------EEEEecCCC
Confidence 57899999988 5555444432 1221111112243 67779999999999999874 344444332
Q ss_pred CC-cceEEeCCCCCcEEEE
Q 014454 375 SK-ISDFSWNPCEDWVISS 392 (424)
Q Consensus 375 ~~-v~~~~~~~~~~~~l~s 392 (424)
.. ..-+.|..+|+..+++
T Consensus 528 g~~a~P~~y~~~G~qYv~~ 546 (582)
T 1flg_A 528 GIVSPPITWEQDGEQYLGV 546 (582)
T ss_dssp CCCSCCEEEEETTEEEEEE
T ss_pred CcccCceEEEECCEEEEEE
Confidence 21 1226666777743443
No 296
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=97.55 E-value=0.027 Score=54.68 Aligned_cols=59 Identities=10% Similarity=-0.026 Sum_probs=36.2
Q ss_pred CeEEEEEcCCCCCCCCeeeeec--cC--------CCeeEEEec-CCCC--eEEEEEeCCCcEEEEECCCCCCcceEe
Q 014454 250 QYLLIWDLRTPSVSKPVQSVVA--HQ--------SEVNCLAFN-PFNE--WILATGSTDKTVKLFDLRKISTALHTF 313 (424)
Q Consensus 250 g~i~i~d~~~~~~~~~~~~~~~--~~--------~~v~~v~~~-~~~~--~~l~tg~~dg~i~iwd~~~~~~~~~~~ 313 (424)
+.|..+|.++++. +-.++. |. .++. +... .+|+ .+++.++.+|.++++|.++ ++++...
T Consensus 278 ~sv~Ald~~TG~~---~W~~q~~~~d~wd~d~~~~p~l-~d~~~~~G~~~~~v~~~~~~G~l~~lD~~t-G~~lw~~ 349 (599)
T 1w6s_A 278 MTIFGRDADTGEA---KFGYQKTPHDEWDYAGVNVMML-SEQKDKDGKARKLLTHPDRNGIVYTLDRTD-GALVSAN 349 (599)
T ss_dssp SEEEEEETTTCCE---EEEEESSTTCSSCCCCCCCCEE-EEEECTTSCEEEEEEEECTTSEEEEEETTT-CCEEEEE
T ss_pred ceEEEEeCCCCce---eeEeecCCCccccccCCCccEE-EeccccCCcEEEEEEEECCCcEEEEEECCC-CCEeecc
Confidence 4799999998874 222222 21 1121 2222 3453 4677889999999999988 5655443
No 297
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=97.52 E-value=0.078 Score=51.45 Aligned_cols=54 Identities=11% Similarity=-0.008 Sum_probs=33.2
Q ss_pred CCcEEEEECCCCCCcceEecCCCCCEEEEEEcCCCCcEEEEEECCCeEEEeeCCCCC
Q 014454 295 DKTVKLFDLRKISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRID 351 (424)
Q Consensus 295 dg~i~iwd~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~l~s~~~dg~i~iwd~~~~~ 351 (424)
.|.|..||+++ ++.+-.... ..++..-.....+. +++.++.|+.++.||.++++
T Consensus 452 ~G~l~A~D~~t-G~~~W~~~~-~~~~~~g~~~tagg-~vf~gt~dg~l~A~D~~tG~ 505 (599)
T 1w6s_A 452 LGQIKAYNAIT-GDYKWEKME-RFAVWGGTMATAGD-LVFYGTLDGYLKARDSDTGD 505 (599)
T ss_dssp CEEEEEECTTT-CCEEEEEEE-SSCCCSBCEEETTT-EEEEECTTSEEEEEETTTCC
T ss_pred cCeEEEEECCC-CCEEeEecC-CCCccCcceEecCC-EEEEECCCCeEEEEECCCCC
Confidence 46788888887 555444432 11221111122343 56778999999999999874
No 298
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=97.43 E-value=0.026 Score=50.72 Aligned_cols=194 Identities=11% Similarity=0.114 Sum_probs=107.9
Q ss_pred eeEEEecCCCCceEEEEe-------------CCCcEEEEeCCCCCCCCcccceee----eecCCccEeeEEEec--CCC-
Q 014454 181 GYGLSWSKFKEGHLLSGS-------------DDAQICLWDINAAPKNKSLEAMQI----FKVHEGVVEDVAWHL--RHE- 240 (424)
Q Consensus 181 v~~l~~~~~~~~~l~s~~-------------~dg~i~iwd~~~~~~~~~~~~~~~----~~~~~~~v~~~~~~~--~~~- 240 (424)
.-.+...|+| ++++++ .+|.|.++|+++.... ...+.. +.........|.+.+ ++.
T Consensus 52 ~EDi~~~~~G--~~~~s~~~~~pg~~~~~~~~~G~I~~~d~~~~~~~--~~~l~~~g~~~~~~~f~PhGi~~~~d~dg~~ 127 (355)
T 3sre_A 52 SEDLEILPNG--LAFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPA--VSELEIIGNTLDISSFNPHGISTFIDDDNTV 127 (355)
T ss_dssp CCEEEECTTS--EEEEEECCC-----------CCEEEEEETTSSSCC--EEECEEECSSCCGGGCCEEEEEEEECTTCCE
T ss_pred cceeEEcCCC--eEEEEeccccCCCcccCCCCCCeEEEEecCCCCCc--eEEEEccCCCCCcCceeeeeeEEEECCCCcE
Confidence 4456666754 344443 6899999999743211 111111 111223566777655 333
Q ss_pred cEEEEEeC--CCeEEEEEcCCCCC-CCCeeeeecc-CCCeeEEEecCCCCeEEEEEeC-----------------CCcEE
Q 014454 241 YLFGSVGD--DQYLLIWDLRTPSV-SKPVQSVVAH-QSEVNCLAFNPFNEWILATGST-----------------DKTVK 299 (424)
Q Consensus 241 ~~~~s~~~--dg~i~i~d~~~~~~-~~~~~~~~~~-~~~v~~v~~~~~~~~~l~tg~~-----------------dg~i~ 299 (424)
+++++-.. +.+|.+|++..... ...+..+.+. -...+.+.+.++|. +.++... .|.|.
T Consensus 128 ~L~Vvnh~~~~s~ielf~~d~~~~~~~~~~~~~g~~~~~pND~~v~~~G~-fyvt~~~~ftd~~~~~~e~~~~~~~g~vy 206 (355)
T 3sre_A 128 YLLVVNHPGSSSTVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVGPEH-FYATNDHYFIDPYLKSWEMHLGLAWSFVT 206 (355)
T ss_dssp EEEEEECSTTCCEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEETTE-EEEEESCSCSSHHHHHHHHHTTCCCEEEE
T ss_pred EEEEEECCCCCCeEEEEEEECCCCEEEEEeccccCCCCCCceEEEeCCCC-EEecCCcEeCCcccccchhhccCCccEEE
Confidence 46655444 56788888775432 1112222221 23578899999887 4555431 24455
Q ss_pred EEECCCCCCcceEecCCCCCEEEEEEcCCCCcEEEEEECCCeEEEeeCCCCCcccCCCCcCCCCCeeeEEEcCCCCCcce
Q 014454 300 LFDLRKISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPEDAEDGPPELLFIHGGHTSKISD 379 (424)
Q Consensus 300 iwd~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~ 379 (424)
-+|.. + +..+...-...+.++|+|+++.++++-+..+.|..|++...... .....+. .....-.
T Consensus 207 r~d~~---~-~~~~~~~l~~pNGia~spDg~~lYvadt~~~~I~~~~~~~~g~l-----------~~~~~~~-~~g~PDG 270 (355)
T 3sre_A 207 YYSPN---D-VRVVAEGFDFANGINISPDGKYVYIAELLAHKIHVYEKHANWTL-----------TPLRVLS-FDTLVDN 270 (355)
T ss_dssp EECTT---C-CEEEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSCE-----------EEEEEEE-CSSEEEE
T ss_pred EEECC---e-EEEeecCCcccCcceECCCCCEEEEEeCCCCeEEEEEECCCCcE-----------ecCEEEe-CCCCCce
Confidence 55542 2 22222223457899999999877777777899999998642110 1111121 1344677
Q ss_pred EEeCC-CCCcEEEEEeCC
Q 014454 380 FSWNP-CEDWVISSVAED 396 (424)
Q Consensus 380 ~~~~~-~~~~~l~s~~~d 396 (424)
++..+ +|. +.+++..+
T Consensus 271 i~vD~e~G~-lwva~~~~ 287 (355)
T 3sre_A 271 ISVDPVTGD-LWVGCHPN 287 (355)
T ss_dssp EEECTTTCC-EEEEEESC
T ss_pred EEEeCCCCc-EEEEecCC
Confidence 88998 588 56655433
No 299
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=97.43 E-value=0.11 Score=50.84 Aligned_cols=161 Identities=7% Similarity=0.005 Sum_probs=104.7
Q ss_pred CceeEEEecCCCCceEEEEeCCCcEEEEeCCCCCCCCcccceeeeecCCccEeeEEEecCCCcEEEEEeCCCeEEEEEcC
Q 014454 179 TEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLR 258 (424)
Q Consensus 179 ~~v~~l~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~dg~i~i~d~~ 258 (424)
..+.+|+|.+.+..++++-...+.|..+++..... .......-.....+++...+.+++.+-+..+.|.+.++.
T Consensus 349 ~~~~~ld~d~~~~~ly~sD~~~~~I~r~~~~g~~~------~~v~~~~~~~p~GlAvD~~~~~lY~tD~~~~~I~v~~~~ 422 (619)
T 3s94_A 349 RHAIAIDYDPVEGYIYWTDDEVRAIRRSFIDGSGS------QFVVTAQIAHPDGIAVDWVARNLYWTDTGTDRIEVTRLN 422 (619)
T ss_dssp SSEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC------EEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred CccEEEEEEcCCCeEEEEeCCCCeEEEEEcCCCcc------EEEEECCCCCcCceEEecccCcEEEEeCCCCcEEEEeCC
Confidence 45788999986664445545678899998875321 111222234677899998777888887788999999987
Q ss_pred CCCCCCCeeeeeccCCCeeEEEecCCCCeEEEEEeC-CCcEEEEECCCCCCcceEecCCCCCEEEEEEcCCCCcEEEEEE
Q 014454 259 TPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATGST-DKTVKLFDLRKISTALHTFDSHKEEVFQVGWNPKNETILASCC 337 (424)
Q Consensus 259 ~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~l~tg~~-dg~i~iwd~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~l~s~~ 337 (424)
.... .......-.....|+++|....++++-.. .+.|...++.. ..........-...+.|++++.+..++++-+
T Consensus 423 G~~~---~~l~~~~l~~P~~iavdp~~G~ly~tD~g~~~~I~r~~~dG-~~~~~l~~~~l~~P~GlalD~~~~~LY~aD~ 498 (619)
T 3s94_A 423 GTMR---KILISEDLEEPRAIVLDPMVGYMYWTDWGEIPKIERAALDG-SDRVVLVNTSLGWPNGLALDYDEGKIYWGDA 498 (619)
T ss_dssp SCSC---EEEECTTCCSEEEEEEETTTTEEEEEECSSSCEEEEEETTS-CSCEEEECSSCSCEEEEEEETTTTEEEEEET
T ss_pred CCeE---EEEEECCCCCeeeEEEEcCCCcEEEecCCCCCEEEEEccCC-CccEEEEeCCCCCCeeeEEcccCCEEEEEEC
Confidence 6431 11222234568999999976656665422 35677777653 2222222323457789999997766666656
Q ss_pred CCCeEEEeeCCC
Q 014454 338 LGRRLMVWDLSR 349 (424)
Q Consensus 338 ~dg~i~iwd~~~ 349 (424)
..+.|..+++..
T Consensus 499 ~~~~I~~~~~dG 510 (619)
T 3s94_A 499 KTDKIEVMNTDG 510 (619)
T ss_dssp TTTEEEEEESSS
T ss_pred CCCEEEEEecCC
Confidence 677898888854
No 300
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=97.42 E-value=0.063 Score=48.19 Aligned_cols=194 Identities=13% Similarity=0.190 Sum_probs=111.9
Q ss_pred ceeEEEecCCCCcEEEEE------------eCCCeEEEEeCCCCCCCCCCCCCCCCcEEEec-----CCCceeEEEecC-
Q 014454 127 EVNRARYMPQNPFLIATK------------TVSAEVYVFDYSKHPSKPPLDGACSPDLRLRG-----HSTEGYGLSWSK- 188 (424)
Q Consensus 127 ~v~~~~~~p~~~~~latg------------~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~-----h~~~v~~l~~~~- 188 (424)
..-.+...|+|. +++++ ..+|.|.++|..+.... .. ...+.+ ......++.+.+
T Consensus 51 G~EDi~~~~~G~-~~~s~~~~~pg~~~~~~~~~G~I~~~d~~~~~~~------~~-~l~~~g~~~~~~~f~PhGi~~~~d 122 (355)
T 3sre_A 51 GSEDLEILPNGL-AFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPA------VS-ELEIIGNTLDISSFNPHGISTFID 122 (355)
T ss_dssp CCCEEEECTTSE-EEEEECCC-----------CCEEEEEETTSSSCC------EE-ECEEECSSCCGGGCCEEEEEEEEC
T ss_pred CcceeEEcCCCe-EEEEeccccCCCcccCCCCCCeEEEEecCCCCCc------eE-EEEccCCCCCcCceeeeeeEEEEC
Confidence 445666778663 33333 26899999998742111 11 112322 223567777765
Q ss_pred -CCCceEEEEe-C--CCcEEEEeCCCCCCCCcccceeeeecC-CccEeeEEEecCCCcEEEEEe----------------
Q 014454 189 -FKEGHLLSGS-D--DAQICLWDINAAPKNKSLEAMQIFKVH-EGVVEDVAWHLRHEYLFGSVG---------------- 247 (424)
Q Consensus 189 -~~~~~l~s~~-~--dg~i~iwd~~~~~~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~~~~s~~---------------- 247 (424)
++..+|+++. . +.+|.+|++..... ....+..+.+. -...+++.+.+++. ++++..
T Consensus 123 ~dg~~~L~Vvnh~~~~s~ielf~~d~~~~--~~~~~~~~~g~~~~~pND~~v~~~G~-fyvt~~~~ftd~~~~~~e~~~~ 199 (355)
T 3sre_A 123 DDNTVYLLVVNHPGSSSTVEVFKFQEEEK--SLLHLKTIRHKLLPSVNDIVAVGPEH-FYATNDHYFIDPYLKSWEMHLG 199 (355)
T ss_dssp TTCCEEEEEEECSTTCCEEEEEEEETTTT--EEEEEEEECCTTCSSEEEEEEEETTE-EEEEESCSCSSHHHHHHHHHTT
T ss_pred CCCcEEEEEEECCCCCCeEEEEEEECCCC--EEEEEeccccCCCCCCceEEEeCCCC-EEecCCcEeCCcccccchhhcc
Confidence 3443455543 2 46788888765432 22333344332 24688999999886 444543
Q ss_pred -CCCeEEEEEcCCCCCCCCeeeeeccCCCeeEEEecCCCCeEEEEEeCCCcEEEEECCCCCCc--ceEecCCCCCEEEEE
Q 014454 248 -DDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATGSTDKTVKLFDLRKISTA--LHTFDSHKEEVFQVG 324 (424)
Q Consensus 248 -~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~l~tg~~dg~i~iwd~~~~~~~--~~~~~~h~~~v~~~~ 324 (424)
..|.|..+|. ++ +..+...-...+.|+|+|+++.++++-+..+.|..|++...+.. ...+. .....-.++
T Consensus 200 ~~~g~vyr~d~--~~----~~~~~~~l~~pNGia~spDg~~lYvadt~~~~I~~~~~~~~g~l~~~~~~~-~~g~PDGi~ 272 (355)
T 3sre_A 200 LAWSFVTYYSP--ND----VRVVAEGFDFANGINISPDGKYVYIAELLAHKIHVYEKHANWTLTPLRVLS-FDTLVDNIS 272 (355)
T ss_dssp CCCEEEEEECT--TC----CEEEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEE-CSSEEEEEE
T ss_pred CCccEEEEEEC--Ce----EEEeecCCcccCcceECCCCCEEEEEeCCCCeEEEEEECCCCcEecCEEEe-CCCCCceEE
Confidence 1244555554 22 22232334567899999999987777777899999999743322 22332 245678899
Q ss_pred EcC-CCCcEEEEEECC
Q 014454 325 WNP-KNETILASCCLG 339 (424)
Q Consensus 325 ~sp-~~~~~l~s~~~d 339 (424)
..+ +|. +.+++..+
T Consensus 273 vD~e~G~-lwva~~~~ 287 (355)
T 3sre_A 273 VDPVTGD-LWVGCHPN 287 (355)
T ss_dssp ECTTTCC-EEEEEESC
T ss_pred EeCCCCc-EEEEecCC
Confidence 998 585 56655544
No 301
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=97.37 E-value=0.029 Score=49.99 Aligned_cols=194 Identities=9% Similarity=0.037 Sum_probs=103.2
Q ss_pred CCceeEEEecCCCCcEEEEEeCCCeEEE-EeCCCCCCCCCCCCCCCCcEEEecCCCceeEEEecCCCCceEEEEeCCCcE
Q 014454 125 DGEVNRARYMPQNPFLIATKTVSAEVYV-FDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDDAQI 203 (424)
Q Consensus 125 ~~~v~~~~~~p~~~~~latg~~dg~v~i-w~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i 203 (424)
++.+..+.+.+++. +++++ .+|.|+. .|-- ..+. .....+...+.++.+.+++. +++.+ .+|.+
T Consensus 121 ~~~~~~i~~~~~~~-~~~~~-~~g~v~~S~DgG---------~tW~--~~~~~~~~~~~~~~~~~~~~-~~~~g-~~G~~ 185 (327)
T 2xbg_A 121 PGSPRLIKALGNGS-AEMIT-NVGAIYRTKDSG---------KNWQ--ALVQEAIGVMRNLNRSPSGE-YVAVS-SRGSF 185 (327)
T ss_dssp SSCEEEEEEEETTE-EEEEE-TTCCEEEESSTT---------SSEE--EEECSCCCCEEEEEECTTSC-EEEEE-TTSSE
T ss_pred CCCeEEEEEECCCC-EEEEe-CCccEEEEcCCC---------CCCE--EeecCCCcceEEEEEcCCCc-EEEEE-CCCcE
Confidence 34567777766553 56654 4554432 2211 1121 11234456788999998765 45554 44554
Q ss_pred EE-EeCCCCCCCCcccceeeeecCCccEeeEEEecCCCcEEEEEeCCCeEEEEEcCCCCCCCCeeee-eccCCCeeEEEe
Q 014454 204 CL-WDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSV-VAHQSEVNCLAF 281 (424)
Q Consensus 204 ~i-wd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~dg~i~i~d~~~~~~~~~~~~~-~~~~~~v~~v~~ 281 (424)
.. +|-. + .....+. ......+..+.+.+++. ++ .++.+|.+++.+...+.....+... ......+.++++
T Consensus 186 ~~S~d~g-G---~tW~~~~--~~~~~~~~~~~~~~~g~-~~-~~~~~G~~~~s~~D~G~tW~~~~~~~~~~~~~~~~v~~ 257 (327)
T 2xbg_A 186 YSTWEPG-Q---TAWEPHN--RTTSRRLHNMGFTPDGR-LW-MIVNGGKIAFSDPDNSENWGELLSPLRRNSVGFLDLAY 257 (327)
T ss_dssp EEEECTT-C---SSCEEEE--CCSSSCEEEEEECTTSC-EE-EEETTTEEEEEETTEEEEECCCBCTTSSCCSCEEEEEE
T ss_pred EEEeCCC-C---CceeECC--CCCCCccceeEECCCCC-EE-EEeCCceEEEecCCCCCeeEeccCCcccCCcceEEEEe
Confidence 33 3321 1 1222221 22456788899988875 54 4556788877643222211111110 012245889999
Q ss_pred cCCCCeEEEEEeCCCcEEEEECCCCCCcceEec---CCCCCEEEEEEcCCCCcEEEEEECCCeEEEeeC
Q 014454 282 NPFNEWILATGSTDKTVKLFDLRKISTALHTFD---SHKEEVFQVGWNPKNETILASCCLGRRLMVWDL 347 (424)
Q Consensus 282 ~~~~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~---~h~~~v~~~~~sp~~~~~l~s~~~dg~i~iwd~ 347 (424)
.+.+. +++++ .+|.| ++.... +..-..+. .....+.++.|.+++ .+++++.+|.|.-++-
T Consensus 258 ~~~~~-~~~~g-~~g~i-~~S~Dg-G~tW~~~~~~~~~~~~~~~v~~~~~~--~~~~~G~~G~i~~~~~ 320 (327)
T 2xbg_A 258 RTPNE-VWLAG-GAGAL-LCSQDG-GQTWQQDVDVKKVPSNFYKILFFSPD--QGFILGQKGILLRYVT 320 (327)
T ss_dssp SSSSC-EEEEE-STTCE-EEESST-TSSCEECGGGTTSSSCCCEEEEEETT--EEEEECSTTEEEEECC
T ss_pred cCCCE-EEEEe-CCCeE-EEeCCC-CcccEEcCccCCCCCCeEEEEEECCC--ceEEEcCCceEEEEcC
Confidence 88665 56555 46766 333332 33333333 224567889887554 3667778887776653
No 302
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=97.20 E-value=0.12 Score=46.63 Aligned_cols=241 Identities=10% Similarity=0.031 Sum_probs=125.0
Q ss_pred CCceeEEEecCCCCcEEEEEeCCCeEEEEeCCCCCCCCCCCCCCCCcEEE---ecCCCceeEEEecCC---CCceEEEEe
Q 014454 125 DGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRL---RGHSTEGYGLSWSKF---KEGHLLSGS 198 (424)
Q Consensus 125 ~~~v~~~~~~p~~~~~latg~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~---~~h~~~v~~l~~~~~---~~~~l~s~~ 198 (424)
-.....++|.|++. ++++ ..+|.|++++... . ..+..+ .........|+++|+ +. .|+.+.
T Consensus 28 l~~P~~ia~~pdG~-l~V~-e~~g~I~~~d~~G---------~-~~~~~~~v~~~g~~g~~gia~~pdf~~~g-~lyv~~ 94 (354)
T 3a9g_A 28 LEVPWSIAPLGGGR-YLVT-ERPGRLVLISPSG---------K-KLVASFDVANVGEAGLLGLALHPEFPKKS-WVYLYA 94 (354)
T ss_dssp CSCEEEEEEEETTE-EEEE-ETTTEEEEECSSC---------E-EEEEECCCCCSTTCSEEEEEECTTTTTSC-EEEEEE
T ss_pred CCCCeEEEEcCCCe-EEEE-eCCCEEEEEeCCC---------c-eEeeccceeecCCCceeeEEeCCCCCcCC-EEEEEE
Confidence 45678899999885 5554 5669999997332 1 111111 112345789999997 44 344433
Q ss_pred C----C----CcEEEEeCCCCCC-CCcccce-eeeec-CCccEeeEEEecCCCcEEEEEeC-------------CCeEEE
Q 014454 199 D----D----AQICLWDINAAPK-NKSLEAM-QIFKV-HEGVVEDVAWHLRHEYLFGSVGD-------------DQYLLI 254 (424)
Q Consensus 199 ~----d----g~i~iwd~~~~~~-~~~~~~~-~~~~~-~~~~v~~~~~~~~~~~~~~s~~~-------------dg~i~i 254 (424)
. + ..|..|+...... ....+.+ ..+.. .......|+|.|++. |+++.+. .|.|.-
T Consensus 95 ~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~-Lyvt~G~~~~~~~~~d~~~~~G~I~r 173 (354)
T 3a9g_A 95 SYFAEGGHIRNRVIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGM-LYITTGDAADPRLAQDLSSLAGKILR 173 (354)
T ss_dssp EEECGGGCEEEEEEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSC-EEEECCCTTCGGGGTCTTCCSSEEEE
T ss_pred eccCCCCCcceEEEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCc-EEEEECCCCCCccccCCCCCCeEEEE
Confidence 2 3 5677777654311 0011111 11211 112346799999986 5555432 245666
Q ss_pred EEcCCCCC------CCCeeeeeccCCCeeEEEecC-CCCeEEEEEeCCC---cEEEEECCC---------------CCCc
Q 014454 255 WDLRTPSV------SKPVQSVVAHQSEVNCLAFNP-FNEWILATGSTDK---TVKLFDLRK---------------ISTA 309 (424)
Q Consensus 255 ~d~~~~~~------~~~~~~~~~~~~~v~~v~~~~-~~~~~l~tg~~dg---~i~iwd~~~---------------~~~~ 309 (424)
++....-. ...+. ..++ .....++|+| .+. ++++-.... .|.+...-. ...+
T Consensus 174 i~~dG~~p~~npf~~~~i~-a~G~-rnp~Gla~d~~~g~-l~v~d~g~~~~dei~~i~~G~nyGwp~~~g~~~~~~~~~p 250 (354)
T 3a9g_A 174 VDEEGRPPADNPFPNSPIW-SYGH-RNPQGIDWHRASGV-MVATEHGPVGHDEVNIILKGGNYGWPLATGKAGRGEFVDP 250 (354)
T ss_dssp ECTTSCCCTTSSSTTCCEE-EECC-SCCCEEEECTTTCC-EEEEECCSSSCCEEEEECTTCBCCTTTCCSCCCCTTSCCC
T ss_pred EcCCCCCCCCCCCCCCcEE-EEcc-CCcceEEEeCCCCC-EEEEecCCCCCcEEEEecCCCcCCCCcccCCCCCCCCcCC
Confidence 65543100 00111 1223 2356899999 555 554433221 244332110 0124
Q ss_pred ceEecCCCCCEEEEEEc-------CCCCcEEEEEECCCeEEEeeCCCCCcccCCCCcCCCCCeeeEEEcCCCCCcceEEe
Q 014454 310 LHTFDSHKEEVFQVGWN-------PKNETILASCCLGRRLMVWDLSRIDEEQTPEDAEDGPPELLFIHGGHTSKISDFSW 382 (424)
Q Consensus 310 ~~~~~~h~~~v~~~~~s-------p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~ 382 (424)
+..+.........++|. .++ .++++.-..+.|...++....... .....+.+-...+.++++
T Consensus 251 ~~~~~~~~~ap~G~~~y~g~~fp~~~G-~l~v~~~~~~~v~~~~~~~~g~~~----------~~~~~~~~~~~rp~~v~~ 319 (354)
T 3a9g_A 251 VIDTGSETWAPSGASFVHGDMFPGLRG-WLLIACLRGSMLAAVNFGDNMEVR----------KISTFFKNVFGRLRDVVI 319 (354)
T ss_dssp SEECTTCCCCEEEEEECCSSSCGGGTT-EEEEEETTTTEEEEEEECGGGCEE----------EEEEECTTTSCCEEEEEE
T ss_pred EeecCCCCcCCcceEEECCCCCcccCC-cEEEEEcCCCEEEEEEECCCCccc----------ceeeeccCCCCCeeEEEE
Confidence 44442223567888884 345 466666667788888876421100 001112222456889999
Q ss_pred CCCCCcEEEEEe
Q 014454 383 NPCEDWVISSVA 394 (424)
Q Consensus 383 ~~~~~~~l~s~~ 394 (424)
.|+|. ++++..
T Consensus 320 ~pDG~-lyv~~~ 330 (354)
T 3a9g_A 320 DDDGG-ILISTS 330 (354)
T ss_dssp CTTSC-EEEEEC
T ss_pred CCCCc-EEEEEe
Confidence 99998 666653
No 303
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=97.20 E-value=0.11 Score=46.20 Aligned_cols=234 Identities=9% Similarity=-0.030 Sum_probs=116.3
Q ss_pred CceeEEEecCCCCcEEEEEeCCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCceeEEEecCCCCceEEEEeCCCcEEE
Q 014454 126 GEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDDAQICL 205 (424)
Q Consensus 126 ~~v~~~~~~p~~~~~latg~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~i 205 (424)
..+.+|.|.+ + .++++ +..|.|+.- .+.. ..+........+...+..+.+.+++. ++++ +.+|.|.
T Consensus 80 ~~~~~i~~~~-~-~~~~~-g~~g~i~~S-~DgG-------~tW~~~~~~~~~~~~~~~i~~~~~~~-~~~~-~~~g~v~- 145 (327)
T 2xbg_A 80 YRFNSVSFQG-N-EGWIV-GEPPIMLHT-TDGG-------QSWSQIPLDPKLPGSPRLIKALGNGS-AEMI-TNVGAIY- 145 (327)
T ss_dssp CEEEEEEEET-T-EEEEE-EETTEEEEE-SSTT-------SSCEECCCCTTCSSCEEEEEEEETTE-EEEE-ETTCCEE-
T ss_pred ccEEEEEecC-C-eEEEE-ECCCeEEEE-CCCC-------CCceECccccCCCCCeEEEEEECCCC-EEEE-eCCccEE-
Confidence 4678888886 3 35555 456655442 2210 11111111111234567777765444 4444 4456542
Q ss_pred EeCCCCCCCCcccceeeeecCCccEeeEEEecCCCcEEEEEeCCCeEEEEEcCCCCCCCCeeeeeccCCCeeEEEecCCC
Q 014454 206 WDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFN 285 (424)
Q Consensus 206 wd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~v~~~~~~ 285 (424)
....+. .+...+ .......+..+++.+++. +++++ ..|.+..-+-..+.....+. ......+..+++.+++
T Consensus 146 -~S~DgG--~tW~~~--~~~~~~~~~~~~~~~~~~-~~~~g-~~G~~~~S~d~gG~tW~~~~--~~~~~~~~~~~~~~~g 216 (327)
T 2xbg_A 146 -RTKDSG--KNWQAL--VQEAIGVMRNLNRSPSGE-YVAVS-SRGSFYSTWEPGQTAWEPHN--RTTSRRLHNMGFTPDG 216 (327)
T ss_dssp -EESSTT--SSEEEE--ECSCCCCEEEEEECTTSC-EEEEE-TTSSEEEEECTTCSSCEEEE--CCSSSCEEEEEECTTS
T ss_pred -EEcCCC--CCCEEe--ecCCCcceEEEEEcCCCc-EEEEE-CCCcEEEEeCCCCCceeECC--CCCCCccceeEECCCC
Confidence 222211 222221 123455788999998765 55444 45555433211122222221 2345678899999987
Q ss_pred CeEEEEEeCCCcEEEEECCCCCCcceEec----CCCCCEEEEEEcCCCCcEEEEEECCCeEEEeeCCCCCcccCCCCcCC
Q 014454 286 EWILATGSTDKTVKLFDLRKISTALHTFD----SHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPEDAED 361 (424)
Q Consensus 286 ~~~l~tg~~dg~i~iwd~~~~~~~~~~~~----~h~~~v~~~~~sp~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~ 361 (424)
. ++ .++.+|.+++.+... +.....+. .+...+.++++.+++. ++++ +.+|.|. +....+.
T Consensus 217 ~-~~-~~~~~G~~~~s~~D~-G~tW~~~~~~~~~~~~~~~~v~~~~~~~-~~~~-g~~g~i~-~S~DgG~---------- 280 (327)
T 2xbg_A 217 R-LW-MIVNGGKIAFSDPDN-SENWGELLSPLRRNSVGFLDLAYRTPNE-VWLA-GGAGALL-CSQDGGQ---------- 280 (327)
T ss_dssp C-EE-EEETTTEEEEEETTE-EEEECCCBCTTSSCCSCEEEEEESSSSC-EEEE-ESTTCEE-EESSTTS----------
T ss_pred C-EE-EEeCCceEEEecCCC-CCeeEeccCCcccCCcceEEEEecCCCE-EEEE-eCCCeEE-EeCCCCc----------
Confidence 6 44 445678877764221 11111111 1234688999998764 5554 4466563 3332221
Q ss_pred CCCeeeEEEc---CCCCCcceEEeCCCCCcEEEEEeCCCcEEEEec
Q 014454 362 GPPELLFIHG---GHTSKISDFSWNPCEDWVISSVAEDNILQIWQM 404 (424)
Q Consensus 362 ~~~~~~~~~~---~h~~~v~~~~~~~~~~~~l~s~~~dg~i~vw~~ 404 (424)
...... .....+.++.|.+++. ++.++.+|.|.-++-
T Consensus 281 ----tW~~~~~~~~~~~~~~~v~~~~~~~--~~~~G~~G~i~~~~~ 320 (327)
T 2xbg_A 281 ----TWQQDVDVKKVPSNFYKILFFSPDQ--GFILGQKGILLRYVT 320 (327)
T ss_dssp ----SCEECGGGTTSSSCCCEEEEEETTE--EEEECSTTEEEEECC
T ss_pred ----ccEEcCccCCCCCCeEEEEEECCCc--eEEEcCCceEEEEcC
Confidence 111111 1234578888875554 556677897766543
No 304
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=97.14 E-value=0.052 Score=47.52 Aligned_cols=193 Identities=9% Similarity=0.077 Sum_probs=90.4
Q ss_pred ceEEEEeCC-----CcEEEEeCCCCCCCCcccceeeeecCCccEeeEEEecCCCcEEEEEeCC-----CeEEEEEcCCCC
Q 014454 192 GHLLSGSDD-----AQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDD-----QYLLIWDLRTPS 261 (424)
Q Consensus 192 ~~l~s~~~d-----g~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~d-----g~i~i~d~~~~~ 261 (424)
.+++.|+.+ ..+.+||+.+.... ....+..+.........+.+ +..+++.|+.+ ..+.+||+.+..
T Consensus 64 ~l~v~GG~~~~~~~~~~~~~d~~~~~~~-~W~~~~~~p~~r~~~~~~~~---~~~lyv~GG~~~~~~~~~~~~~d~~~~~ 139 (301)
T 2vpj_A 64 RIYVIGGYDGRSRLSSVECLDYTADEDG-VWYSVAPMNVRRGLAGATTL---GDMIYVSGGFDGSRRHTSMERYDPNIDQ 139 (301)
T ss_dssp EEEEECCBCSSCBCCCEEEEETTCCTTC-CCEEECCCSSCCBSCEEEEE---TTEEEEECCBCSSCBCCEEEEEETTTTE
T ss_pred EEEEEcCCCCCccCceEEEEECCCCCCC-eeEECCCCCCCccceeEEEE---CCEEEEEcccCCCcccceEEEEcCCCCe
Confidence 366777654 46889998766410 01112111111111122222 34577777643 358889987754
Q ss_pred CCCCeeeeeccCCCeeEEEecCCCCeEEEEEeCC-----CcEEEEECCCCC-CcceEecCCCCCEEEEEEcCCCCcEEEE
Q 014454 262 VSKPVQSVVAHQSEVNCLAFNPFNEWILATGSTD-----KTVKLFDLRKIS-TALHTFDSHKEEVFQVGWNPKNETILAS 335 (424)
Q Consensus 262 ~~~~~~~~~~~~~~v~~v~~~~~~~~~l~tg~~d-----g~i~iwd~~~~~-~~~~~~~~h~~~v~~~~~sp~~~~~l~s 335 (424)
- ..+..+......-.++.+ ++ .+++.|+.+ ..+.+||+.+.. ..+..+......-..+.+ ++ .+++.
T Consensus 140 W-~~~~~~p~~r~~~~~~~~--~~-~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~-~i~v~ 212 (301)
T 2vpj_A 140 W-SMLGDMQTAREGAGLVVA--SG-VIYCLGGYDGLNILNSVEKYDPHTGHWTNVTPMATKRSGAGVALL--ND-HIYVV 212 (301)
T ss_dssp E-EEEEECSSCCBSCEEEEE--TT-EEEEECCBCSSCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TT-EEEEE
T ss_pred E-EECCCCCCCcccceEEEE--CC-EEEEECCCCCCcccceEEEEeCCCCcEEeCCCCCcccccceEEEE--CC-EEEEE
Confidence 1 122222111111222223 34 477777754 458899987621 111111111111222222 33 57777
Q ss_pred EECC-----CeEEEeeCCCCCcccCCCCcCCCCCeeeEEEcCCCCCcceEEeCCCCCcEEEEEeCC-----CcEEEEecC
Q 014454 336 CCLG-----RRLMVWDLSRIDEEQTPEDAEDGPPELLFIHGGHTSKISDFSWNPCEDWVISSVAED-----NILQIWQMA 405 (424)
Q Consensus 336 ~~~d-----g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d-----g~i~vw~~~ 405 (424)
|+.+ ..+.+||+.+..-... ............+.+ ++. +++.|+.+ ..+.+||+.
T Consensus 213 GG~~~~~~~~~v~~yd~~~~~W~~~------------~~~p~~r~~~~~~~~--~~~-i~v~GG~~~~~~~~~v~~yd~~ 277 (301)
T 2vpj_A 213 GGFDGTAHLSSVEAYNIRTDSWTTV------------TSMTTPRCYVGATVL--RGR-LYAIAGYDGNSLLSSIECYDPI 277 (301)
T ss_dssp CCBCSSSBCCCEEEEETTTTEEEEE------------CCCSSCCBSCEEEEE--TTE-EEEECCBCSSSBEEEEEEEETT
T ss_pred eCCCCCcccceEEEEeCCCCcEEEC------------CCCCCcccceeEEEE--CCE-EEEEcCcCCCcccccEEEEcCC
Confidence 7764 4588898876431110 000000011111222 455 67777655 457888888
Q ss_pred CccCC
Q 014454 406 ENIYH 410 (424)
Q Consensus 406 ~~~~~ 410 (424)
++...
T Consensus 278 ~~~W~ 282 (301)
T 2vpj_A 278 IDSWE 282 (301)
T ss_dssp TTEEE
T ss_pred CCeEE
Confidence 76543
No 305
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=97.00 E-value=0.14 Score=45.43 Aligned_cols=156 Identities=10% Similarity=0.190 Sum_probs=93.3
Q ss_pred CCeEEEEeCCCCCCCCCCCCCCCCcEEEe------cCC-CceeEEEe--cCC-CCceEEEEeCCCcEEEEeCCCCCCC-C
Q 014454 147 SAEVYVFDYSKHPSKPPLDGACSPDLRLR------GHS-TEGYGLSW--SKF-KEGHLLSGSDDAQICLWDINAAPKN-K 215 (424)
Q Consensus 147 dg~v~iw~~~~~~~~~~~~~~~~~~~~~~------~h~-~~v~~l~~--~~~-~~~~l~s~~~dg~i~iwd~~~~~~~-~ 215 (424)
+++|.+|++.... .++..+. +.. ..+..+++ +|. +..++++...+|.+..|++...... .
T Consensus 98 ~n~l~vf~iDp~~---------~~l~~i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~ 168 (355)
T 3amr_A 98 KNTIEIYAIDGKN---------GTLQSMTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYI 168 (355)
T ss_dssp CCEEEEEEECTTT---------CCEEECSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCE
T ss_pred CCeEEEEEECCCC---------CceeeccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcc
Confidence 5799999885311 1122221 111 56777888 664 3336888888999999998543221 2
Q ss_pred cccceeeeecCCccEeeEEEecCCCcEEEEEeCCCeEEEEEcCCCC--CCCCeeeee--ccCCCeeEEEe--cCCCC-eE
Q 014454 216 SLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPS--VSKPVQSVV--AHQSEVNCLAF--NPFNE-WI 288 (424)
Q Consensus 216 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~dg~i~i~d~~~~~--~~~~~~~~~--~~~~~v~~v~~--~~~~~-~~ 288 (424)
..+.++.+.. .+.+..+...+....++ .+-.+.-|..+|.+... ..+.+.... .....+..|++ .+++. ++
T Consensus 169 ~~~lVR~f~l-gsq~EgcvvDd~~g~Ly-v~eEd~GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyL 246 (355)
T 3amr_A 169 SGKKVRAFKM-NSQTEGMAADDEYGRLY-IAEEDEAIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYL 246 (355)
T ss_dssp EEEEEEEEEC-SSCEEEEEEETTTTEEE-EEETTTEEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEE
T ss_pred cceEEEEecC-CCCcceEEEcCCCCeEE-EecccceEEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCCEEE
Confidence 2234455553 46788899998877776 67777667666754322 111222221 12246777777 45555 56
Q ss_pred EEEEeCCCcEEEEECCCCCCcceEe
Q 014454 289 LATGSTDKTVKLFDLRKISTALHTF 313 (424)
Q Consensus 289 l~tg~~dg~i~iwd~~~~~~~~~~~ 313 (424)
|++.-.+.+..+||.....+.+..|
T Consensus 247 ivSsQG~~s~~Vydr~~~~~~vg~f 271 (355)
T 3amr_A 247 MASSQGNSSYAIYDRQGKNKYVADF 271 (355)
T ss_dssp EEEEGGGTEEEEEESSTTCCEEEEE
T ss_pred EEEcCCCCEEEEEECCCCCcEEEEE
Confidence 6666567899999997434555555
No 306
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=96.90 E-value=0.067 Score=46.96 Aligned_cols=233 Identities=11% Similarity=0.040 Sum_probs=106.4
Q ss_pred CcEEEEEeCC--CeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCceeEEEecCCCCceEEEEeCC----CcEEEEeCCCC
Q 014454 138 PFLIATKTVS--AEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDD----AQICLWDINAA 211 (424)
Q Consensus 138 ~~~latg~~d--g~v~iw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~d----g~i~iwd~~~~ 211 (424)
..+++.|+.+ ..+.+||..+ ..+.....+.........+.+ +..+++.|+.+ ..+.+||+.+.
T Consensus 12 ~~l~~~GG~~~~~~~~~~d~~~--------~~W~~~~~~p~~r~~~~~~~~---~~~lyv~GG~~~~~~~~~~~~d~~~~ 80 (306)
T 3ii7_A 12 DYRIALFGGSQPQSCRYFNPKD--------YSWTDIRCPFEKRRDAACVFW---DNVVYILGGSQLFPIKRMDCYNVVKD 80 (306)
T ss_dssp CEEEEEECCSSTTSEEEEETTT--------TEEEECCCCSCCCBSCEEEEE---TTEEEEECCBSSSBCCEEEEEETTTT
T ss_pred ceEEEEeCCCCCceEEEecCCC--------CCEecCCCCCcccceeEEEEE---CCEEEEEeCCCCCCcceEEEEeCCCC
Confidence 3466677653 5788888876 222211111111111112222 33366777654 56888888764
Q ss_pred CCCCcccceeeeecCCccEeeEEEecCCCcEEEEEeCC------CeEEEEEcCCCCCCCCeeeeeccCCCeeEEEecCCC
Q 014454 212 PKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDD------QYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFN 285 (424)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~d------g~i~i~d~~~~~~~~~~~~~~~~~~~v~~v~~~~~~ 285 (424)
. ...+..+.........+.+ +..+++.|+.+ ..+.+||+.+..- ..+..+......-.++.+ ++
T Consensus 81 ~----W~~~~~~p~~r~~~~~~~~---~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W-~~~~~~p~~r~~~~~~~~--~~ 150 (306)
T 3ii7_A 81 S----WYSKLGPPTPRDSLAACAA---EGKIYTSGGSEVGNSALYLFECYDTRTESW-HTKPSMLTQRCSHGMVEA--NG 150 (306)
T ss_dssp E----EEEEECCSSCCBSCEEEEE---TTEEEEECCBBTTBSCCCCEEEEETTTTEE-EEECCCSSCCBSCEEEEE--TT
T ss_pred e----EEECCCCCccccceeEEEE---CCEEEEECCCCCCCcEeeeEEEEeCCCCce-EeCCCCcCCcceeEEEEE--CC
Confidence 2 1112111111111112222 34577777755 4588999887541 111111111111122222 23
Q ss_pred CeEEEEEeC---------CCcEEEEECCCCC-CcceEecCCCCCEEEEEEcCCCCcEEEEEECC-----CeEEEeeCCCC
Q 014454 286 EWILATGST---------DKTVKLFDLRKIS-TALHTFDSHKEEVFQVGWNPKNETILASCCLG-----RRLMVWDLSRI 350 (424)
Q Consensus 286 ~~~l~tg~~---------dg~i~iwd~~~~~-~~~~~~~~h~~~v~~~~~sp~~~~~l~s~~~d-----g~i~iwd~~~~ 350 (424)
.+++.|+. -..+.+||+.+.. ..+..+......-..+.+ ++ .+++.|+.+ ..+.+||+.+.
T Consensus 151 -~iyv~GG~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~-~i~v~GG~~~~~~~~~~~~yd~~~~ 226 (306)
T 3ii7_A 151 -LIYVCGGSLGNNVSGRVLNSCEVYDPATETWTELCPMIEARKNHGLVFV--KD-KIFAVGGQNGLGGLDNVEYYDIKLN 226 (306)
T ss_dssp -EEEEECCEESCTTTCEECCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TT-EEEEECCEETTEEBCCEEEEETTTT
T ss_pred -EEEEECCCCCCCCcccccceEEEeCCCCCeEEECCCccchhhcceEEEE--CC-EEEEEeCCCCCCCCceEEEeeCCCC
Confidence 46777764 3458899987621 111111111111122222 34 467676643 35788888764
Q ss_pred CcccCCCCcCCCCCeeeEEEcCCCCCcceEEeCCCCCcEEEEEeCC-----CcEEEEecCCccCC
Q 014454 351 DEEQTPEDAEDGPPELLFIHGGHTSKISDFSWNPCEDWVISSVAED-----NILQIWQMAENIYH 410 (424)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d-----g~i~vw~~~~~~~~ 410 (424)
.-.... .+.........+.+ ++. +++.|+.+ +.+.+||+.++...
T Consensus 227 ~W~~~~------------~~p~~r~~~~~~~~--~~~-i~v~GG~~~~~~~~~~~~yd~~~~~W~ 276 (306)
T 3ii7_A 227 EWKMVS------------PMPWKGVTVKCAAV--GSI-VYVLAGFQGVGRLGHILEYNTETDKWV 276 (306)
T ss_dssp EEEECC------------CCSCCBSCCEEEEE--TTE-EEEEECBCSSSBCCEEEEEETTTTEEE
T ss_pred cEEECC------------CCCCCccceeEEEE--CCE-EEEEeCcCCCeeeeeEEEEcCCCCeEE
Confidence 211110 00000111122222 444 77777744 56888998887543
No 307
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=96.86 E-value=0.24 Score=44.50 Aligned_cols=256 Identities=11% Similarity=0.079 Sum_probs=124.7
Q ss_pred CceeEEEecCCCCcEEEEEeCCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCceeEEEecCC---CCceEEEEeC---
Q 014454 126 GEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKF---KEGHLLSGSD--- 199 (424)
Q Consensus 126 ~~v~~~~~~p~~~~~latg~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~---~~~~l~s~~~--- 199 (424)
.....|+|.|++..+++ +...|.|++++........- ...+ ............|+++|+ +..+.++-+.
T Consensus 18 ~~P~~i~~~pdG~~l~V-~e~~G~i~~~~~~g~~~~~~---~~~~-~v~~~g~~g~~gia~~pdf~~~g~lYv~~~~~~~ 92 (353)
T 2g8s_A 18 DHPWALAFLPDNHGMLI-TLRGGELRHWQAGKGLSAPL---SGVP-DVWAHGQGGLLDVVLAPDFAQSRRIWLSYSEVGD 92 (353)
T ss_dssp SSEEEEEECSTTCCEEE-EETTTEEEEEETTTEECCCC---BSCC-CCCCSTTCSEEEEEECTTHHHHCEEEEEEEEECS
T ss_pred CCcEEEEEcCCCCEEEE-EeCCceEEEEeCCCceeeEe---cCCc-ccccCCCCCceeEEECCCCCCCCEEEEEEeCCCC
Confidence 45678999999863444 45679999998543110000 0000 001112345689999995 4423333222
Q ss_pred ----CCcEEEEeCCCCCC-CCcccce-eeee---cCCccEeeEEEecCCCcEEEEEeC-------------CCeEEEEEc
Q 014454 200 ----DAQICLWDINAAPK-NKSLEAM-QIFK---VHEGVVEDVAWHLRHEYLFGSVGD-------------DQYLLIWDL 257 (424)
Q Consensus 200 ----dg~i~iwd~~~~~~-~~~~~~~-~~~~---~~~~~v~~~~~~~~~~~~~~s~~~-------------dg~i~i~d~ 257 (424)
...|..+++..... ....+.+ ..+. ........|+|.|++ .|+++.+. .|.|.-++.
T Consensus 93 ~g~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~pdG-~Lyv~~Gd~~~~~~~q~~~~~~g~I~ri~~ 171 (353)
T 2g8s_A 93 DGKAGTAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDGKG-YLFIALGENNQRPTAQDLDKLQGKLVRLTD 171 (353)
T ss_dssp SSCEEEEEEEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECSSS-EEEEEECCTTCGGGGGCTTSCTTEEEEEET
T ss_pred CCCceeEEEEEEECCCCCCCCceEEEEEECCCCCCCcccCccEEECCCC-cEEEEECCCCCCCccCCCCCCCeEEEEECC
Confidence 23566666643211 0011111 1111 011124679999998 46555443 246777776
Q ss_pred CCCCC-----------CCCeeeeeccCCCeeEEEecCCCCeEEEEEe-CCCcEEEEECCCC-------------------
Q 014454 258 RTPSV-----------SKPVQSVVAHQSEVNCLAFNPFNEWILATGS-TDKTVKLFDLRKI------------------- 306 (424)
Q Consensus 258 ~~~~~-----------~~~~~~~~~~~~~v~~v~~~~~~~~~l~tg~-~dg~i~iwd~~~~------------------- 306 (424)
...-. ...+.. .++ .....++|+|....++++-. .++.=.|.-+...
T Consensus 172 dG~~p~~npf~~~~~~~~~i~a-~G~-rnp~gl~~d~~~g~l~~~d~g~~~~dei~~i~~G~nyGwp~~~~~~~~~~~~~ 249 (353)
T 2g8s_A 172 QGEIPDDNPFIKESGVRAEIWS-YGI-RNPQGMAMNPWSNALWLNEHGPRGGDEINIPQKGKNYGWPLATWGINYSGFKI 249 (353)
T ss_dssp TSCCCTTCTTTTSTTSCTTEEE-ECC-SEEEEEEEETTTTEEEEEEECSBSCEEEECCCTTCBCCTTTBCSSBCTTSSCC
T ss_pred CCCCCCCCCCcCCCCCCccEEE-EcC-cCccceEEECCCCCEEEEecCCCCCcEEeEeccCCcCCCCCccCCCCCCCCcc
Confidence 53200 011111 122 34678999994333444422 1211122111110
Q ss_pred -----------CCcceEecCCCCCEEEEEEcC-------CCCcEEEEEECCCeEEEeeCCCCCcccCCCCcCCCCCeeeE
Q 014454 307 -----------STALHTFDSHKEEVFQVGWNP-------KNETILASCCLGRRLMVWDLSRIDEEQTPEDAEDGPPELLF 368 (424)
Q Consensus 307 -----------~~~~~~~~~h~~~v~~~~~sp-------~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~ 368 (424)
..++..+.. ...+..++|.. ++ .++++.-..+.|...++...... ....
T Consensus 250 ~~~~~~~~~~~~~P~~~~~~-~~ap~G~~~y~g~~fp~~~g-~l~v~~~~~~~v~~~~~~~~~~~-----------~~~~ 316 (353)
T 2g8s_A 250 PEAKGEIVAGTEQPVFYWKD-SPAVSGMAFYNSDKFPQWQQ-KLFIGALKDKDVIVMSVNGDKVT-----------EDGR 316 (353)
T ss_dssp TTCCBSSCTTSCCCSEEESS-CCCEEEEEEECCSSSGGGTT-EEEEEETTTTEEEEEEEETTEEE-----------EEEE
T ss_pred CcccCCCCCCccCCeEEeCC-CcCcceeEEECCccCcccCC-cEEEEEccCCEEEEEEeCCCeEe-----------eeEE
Confidence 112233332 34677888864 34 46666666777777776532100 0011
Q ss_pred EEcCCCCCcceEEeCCCCCcEEEEEe-CCCcEEEEecC
Q 014454 369 IHGGHTSKISDFSWNPCEDWVISSVA-EDNILQIWQMA 405 (424)
Q Consensus 369 ~~~~h~~~v~~~~~~~~~~~~l~s~~-~dg~i~vw~~~ 405 (424)
.+.+....+.++++.|+|. ++++.. .+| +||++.
T Consensus 317 ~~~~~~~rp~~v~~~pdG~-lyv~td~~~g--~I~ri~ 351 (353)
T 2g8s_A 317 ILTDRGQRIRDVRTGPDGY-LYVLTDESSG--ELLKVS 351 (353)
T ss_dssp ESGGGCCCEEEEEECTTSC-EEEEECSTTE--EEEEEE
T ss_pred cccCCCCceeEEEECCCCc-EEEEEeCCCC--EEEEEe
Confidence 1122234689999999998 555433 334 566653
No 308
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=96.85 E-value=0.22 Score=45.35 Aligned_cols=154 Identities=11% Similarity=0.118 Sum_probs=93.0
Q ss_pred ecCCCcEEEEEeCCCeEEEEEcCCCCCCCCeeeeecc----CCCeeEEEecCCCCeEEEEEeCCCcEEEEECCCCCCc--
Q 014454 236 HLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAH----QSEVNCLAFNPFNEWILATGSTDKTVKLFDLRKISTA-- 309 (424)
Q Consensus 236 ~~~~~~~~~s~~~dg~i~i~d~~~~~~~~~~~~~~~~----~~~v~~v~~~~~~~~~l~tg~~dg~i~iwd~~~~~~~-- 309 (424)
..++..++++ .++.||.-++..... .+.+... -..+..+..+|+|. +||..+ +..|.|..+......
T Consensus 29 ~~n~t~i~~a--~~n~iR~~~i~~~~~---Yk~L~~~~~i~f~~i~qlvlSpsG~-lLAl~g-~~~V~Vv~LP~~~~~~~ 101 (452)
T 3pbp_A 29 SQNGTRIVFI--QDNIIRWYNVLTDSL---YHSLNFSRHLVLDDTFHVISSTSGD-LLCLFN-DNEIFVMEVPWGYSNVE 101 (452)
T ss_dssp ETTTTEEEEE--ETTEEEEEETTTCSS---CEEEECTTTCCCCTTCEEEECTTSS-EEEEEC-SSEEEEEECCTTCSCCC
T ss_pred EcCCCEEEEE--ECCEEEEEECCCCCc---ceEEecCcccccCceeEEEECCCCC-EEEEec-CCeEEEEEecCccccCc
Confidence 3445555533 468899888875432 3333322 23678899999998 566654 568999988732211
Q ss_pred ---------ceEecC------CCCCEEEEEEcCCCCc--EEEEEECCCeEEEeeCCCCCcccCCCCcCCCCCeeeEEEcC
Q 014454 310 ---------LHTFDS------HKEEVFQVGWNPKNET--ILASCCLGRRLMVWDLSRIDEEQTPEDAEDGPPELLFIHGG 372 (424)
Q Consensus 310 ---------~~~~~~------h~~~v~~~~~sp~~~~--~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 372 (424)
.+.+.. ...+|..+.|+|-+.. .|++-..|+.|++||+......-. ... .. ...+....
T Consensus 102 ~~~~~~~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~s~~~P~--~L~-k~-~~~fg~d~ 177 (452)
T 3pbp_A 102 DVSIQDAFQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILNSQEKPI--VLN-KP-NNSFGLDA 177 (452)
T ss_dssp CHHHHHTTEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTCTTSCCE--EES-CC-CSEEESCS
T ss_pred ccccccccceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEEecCCEEEEEEcccCCCCCc--chh-cc-ccccCCCc
Confidence 112221 2578999999996533 788999999999999987221100 000 00 01122233
Q ss_pred CCCCcceEEeCCCCCcEEEEEe--CCCcEEE
Q 014454 373 HTSKISDFSWNPCEDWVISSVA--EDNILQI 401 (424)
Q Consensus 373 h~~~v~~~~~~~~~~~~l~s~~--~dg~i~v 401 (424)
....|.+++|..++- .|...+ ..|.|+-
T Consensus 178 ~~~ev~S~~Fg~~~l-TLYvl~~t~~GDIYA 207 (452)
T 3pbp_A 178 RVNDITDLEFSKDGL-TLYCLNTTEGGDIFA 207 (452)
T ss_dssp SCCCEEEEEECTTSS-CEEEEECTTSCEEEE
T ss_pred ccceEEEEEEcCCCc-EEEEEecCCCCCEEE
Confidence 445688999998654 444433 6676653
No 309
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=96.84 E-value=0.094 Score=47.21 Aligned_cols=109 Identities=13% Similarity=0.135 Sum_probs=62.5
Q ss_pred CCceeEEEecCCCCceEEEEeCCCcEEEEeCCCCCCCCcccceeeeecCCccEeeEEEecC---CCcEEEEEeCC-----
Q 014454 178 STEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLR---HEYLFGSVGDD----- 249 (424)
Q Consensus 178 ~~~v~~l~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~---~~~~~~s~~~d----- 249 (424)
-....+++|.|++. |+.+...|.|.+++ .+.. ..+..+............|+++|+ +..++++-...
T Consensus 30 l~~P~~ia~~pdG~--l~V~e~~g~I~~i~--~g~~-~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~ 104 (352)
T 2ism_A 30 LEVPWALAFLPDGG--MLIAERPGRIRLFR--EGRL-STYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGLR 104 (352)
T ss_dssp CSCEEEEEECTTSC--EEEEETTTEEEEEE--TTEE-EEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSSE
T ss_pred CCCceEEEEcCCCe--EEEEeCCCeEEEEE--CCCc-cEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCCCc
Confidence 34567999999886 55556779999998 2211 111000111122456889999998 66677665543
Q ss_pred CeEEEEEcCCCCCC--CCee-eee---ccCCCeeEEEecCCCCeEEEEE
Q 014454 250 QYLLIWDLRTPSVS--KPVQ-SVV---AHQSEVNCLAFNPFNEWILATG 292 (424)
Q Consensus 250 g~i~i~d~~~~~~~--~~~~-~~~---~~~~~v~~v~~~~~~~~~l~tg 292 (424)
+.|..++....... +.+. .+. ........++|.|+|. ++++.
T Consensus 105 ~~v~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~-Lyv~~ 152 (352)
T 2ism_A 105 NQVVRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGM-LYVTT 152 (352)
T ss_dssp EEEEEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSC-EEEEC
T ss_pred cEEEEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCC-EEEEE
Confidence 67888887643210 0111 122 1112346899999996 55553
No 310
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=96.83 E-value=0.084 Score=46.21 Aligned_cols=191 Identities=10% Similarity=0.061 Sum_probs=88.3
Q ss_pred ceEEEEeCC-----CcEEEEeCCCCCCCCcccceeeeecCCccEeeEEEecCCCcEEEEEeCCC-----eEEEEEcCCCC
Q 014454 192 GHLLSGSDD-----AQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQ-----YLLIWDLRTPS 261 (424)
Q Consensus 192 ~~l~s~~~d-----g~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~dg-----~i~i~d~~~~~ 261 (424)
.+++.|+.+ ..+.+||+.+.. ...+..+.........+.+ +..+++.|+.++ .+.+||+.+..
T Consensus 63 ~lyv~GG~~~~~~~~~~~~~d~~~~~----W~~~~~~p~~r~~~~~~~~---~~~iyv~GG~~~~~~~~~~~~~d~~~~~ 135 (302)
T 2xn4_A 63 LVFAVGGFNGSLRVRTVDSYDPVKDQ----WTSVANMRDRRSTLGAAVL---NGLLYAVGGFDGSTGLSSVEAYNIKSNE 135 (302)
T ss_dssp EEEEESCBCSSSBCCCEEEEETTTTE----EEEECCCSSCCBSCEEEEE---TTEEEEEEEECSSCEEEEEEEEETTTTE
T ss_pred EEEEEeCcCCCccccceEEECCCCCc----eeeCCCCCccccceEEEEE---CCEEEEEcCCCCCccCceEEEEeCCCCe
Confidence 366677654 357888886542 1111111111111112222 345777777553 47788887654
Q ss_pred CCCCeeeeeccCCCeeEEEecCCCCeEEEEEeCC-------CcEEEEECCCCC-CcceEecCCCCCEEEEEEcCCCCcEE
Q 014454 262 VSKPVQSVVAHQSEVNCLAFNPFNEWILATGSTD-------KTVKLFDLRKIS-TALHTFDSHKEEVFQVGWNPKNETIL 333 (424)
Q Consensus 262 ~~~~~~~~~~~~~~v~~v~~~~~~~~~l~tg~~d-------g~i~iwd~~~~~-~~~~~~~~h~~~v~~~~~sp~~~~~l 333 (424)
- ..+..+........++.+ ++ .+++.|+.+ ..+.+||+.+.. ..+..+.........+.+ ++ .++
T Consensus 136 W-~~~~~~p~~r~~~~~~~~--~~-~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~-~iy 208 (302)
T 2xn4_A 136 W-FHVAPMNTRRSSVGVGVV--GG-LLYAVGGYDVASRQCLSTVECYNATTNEWTYIAEMSTRRSGAGVGVL--NN-LLY 208 (302)
T ss_dssp E-EEECCCSSCCBSCEEEEE--TT-EEEEECCEETTTTEECCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TT-EEE
T ss_pred E-eecCCCCCcccCceEEEE--CC-EEEEEeCCCCCCCccccEEEEEeCCCCcEEECCCCccccccccEEEE--CC-EEE
Confidence 1 111111111111222222 23 477777643 358899987521 111111111112222222 33 477
Q ss_pred EEEECC-----CeEEEeeCCCCCcccCCCCcCCCCCeeeEEEcCCCCCcceEEeCCCCCcEEEEEeCCC-----cEEEEe
Q 014454 334 ASCCLG-----RRLMVWDLSRIDEEQTPEDAEDGPPELLFIHGGHTSKISDFSWNPCEDWVISSVAEDN-----ILQIWQ 403 (424)
Q Consensus 334 ~s~~~d-----g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg-----~i~vw~ 403 (424)
+.|+.+ ..+.+||+.+..-.... ...........+.+ ++. +++.|+.++ .+.+||
T Consensus 209 v~GG~~~~~~~~~~~~yd~~~~~W~~~~------------~~~~~r~~~~~~~~--~~~-i~v~GG~~~~~~~~~v~~yd 273 (302)
T 2xn4_A 209 AVGGHDGPLVRKSVEVYDPTTNAWRQVA------------DMNMCRRNAGVCAV--NGL-LYVVGGDDGSCNLASVEYYN 273 (302)
T ss_dssp EECCBSSSSBCCCEEEEETTTTEEEEEC------------CCSSCCBSCEEEEE--TTE-EEEECCBCSSSBCCCEEEEE
T ss_pred EECCCCCCcccceEEEEeCCCCCEeeCC------------CCCCccccCeEEEE--CCE-EEEECCcCCCcccccEEEEc
Confidence 777654 35888888764211100 00000000111222 455 677777553 489999
Q ss_pred cCCccCCC
Q 014454 404 MAENIYHD 411 (424)
Q Consensus 404 ~~~~~~~~ 411 (424)
+.++....
T Consensus 274 ~~~~~W~~ 281 (302)
T 2xn4_A 274 PTTDKWTV 281 (302)
T ss_dssp TTTTEEEE
T ss_pred CCCCeEEE
Confidence 98886654
No 311
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=96.76 E-value=0.25 Score=43.28 Aligned_cols=236 Identities=10% Similarity=0.119 Sum_probs=139.5
Q ss_pred EEecCCCCcEEEEEeCCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCceeEEEecCCCCceEEEEeCCCcEEEEeCCC
Q 014454 131 ARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINA 210 (424)
Q Consensus 131 ~~~~p~~~~~latg~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~iwd~~~ 210 (424)
.-.+|..+ +||.-. ..++.|||++. ........ ....|.-=.|-... .|+-.. +..|+-|++..
T Consensus 72 AIMnP~~~-ViALra-g~~LQiFnlet----------K~klks~~-~~e~VvfWkWis~~--~L~lVT-~taVyHWs~~~ 135 (365)
T 2xzh_A 72 AIMNPASK-VIALKA-GKTLQIFNIEM----------KSKMKAHT-MTDDVTFWKWISLN--TVALVT-DNAVYHWSMEG 135 (365)
T ss_dssp EEECSSSS-EEEEEE-TTEEEEEETTT----------TEEEEEEE-CSSCEEEEEECSSS--EEEEEE-SSEEEEEESST
T ss_pred eeeCCCcc-EEEEec-CCeEEEechHH----------hhhhccee-cCCccEEEEecCCC--eEEEEc-CCcEEEEcccC
Confidence 33477554 777655 67999999998 22222222 34567777776544 354444 35899999976
Q ss_pred CCCCCcccceeeeecCC----ccEeeEEEecCCCcEEEEEe------CCCeEEEEEcCCCCCCCCeeeeeccCCCeeEEE
Q 014454 211 APKNKSLEAMQIFKVHE----GVVEDVAWHLRHEYLFGSVG------DDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLA 280 (424)
Q Consensus 211 ~~~~~~~~~~~~~~~~~----~~v~~~~~~~~~~~~~~s~~------~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~v~ 280 (424)
.. .+.+.+..|. ..|..-..+++.+.++++|- -.|.+.+|..+... -+.+.+|......+.
T Consensus 136 ~s-----~P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~~----sQ~ieGhaa~F~~~~ 206 (365)
T 2xzh_A 136 ES-----QPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKV----SQPIEGHAASFAQFK 206 (365)
T ss_dssp TC-----CCEEEEECCGGGTTCEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEETTTTE----EEEECCSEEEEEEEC
T ss_pred CC-----CCceeeecchhcccceEEEEEECCCCCEEEEEeEeccCCccceeEEEEeecccc----cceeeeeeeeeEEEe
Confidence 32 2344444443 46777777888887776663 34778899887643 345556654443333
Q ss_pred ec--CCCCeEEEEEeC---CCcEEEEECCCC--CCcc------eEec---CCCCCEEEEEEcCCCCcEEEEEECCCeEEE
Q 014454 281 FN--PFNEWILATGST---DKTVKLFDLRKI--STAL------HTFD---SHKEEVFQVGWNPKNETILASCCLGRRLMV 344 (424)
Q Consensus 281 ~~--~~~~~~l~tg~~---dg~i~iwd~~~~--~~~~------~~~~---~h~~~v~~~~~sp~~~~~l~s~~~dg~i~i 344 (424)
.. +....+|+.+.. .+.++|-++... +.+. ..+. ....-..++..++... ++..-+.-|.|++
T Consensus 207 ~~g~~~~~~lf~fa~r~~~g~kLhIiEi~~~~~~~~~f~kk~vdi~fppea~~DFPVamqvs~kyg-viyviTK~G~ihl 285 (365)
T 2xzh_A 207 MEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHD-VVFLITKYGYIHL 285 (365)
T ss_dssp CTTCSSCEEEEEEEEEETTEEEEEEEECSSCCTTCCCCCCEEEEECCCTTCTTCCEEEEEEETTTT-EEEEEETTSEEEE
T ss_pred cCCCCCCceEEEEEEecCCCcEEEEEEcCCCCCCCCCcccccceeeCCccccCCceEEEEecccCC-EEEEEeCCcEEEE
Confidence 32 111224444333 258999998543 1111 1111 1234556788888775 7888899999999
Q ss_pred eeCCCCCcccCCCCcCCCCCeeeEEEcCCCCCcceEEeCCCCCcEEEEEeCCCcEEEEecCCc
Q 014454 345 WDLSRIDEEQTPEDAEDGPPELLFIHGGHTSKISDFSWNPCEDWVISSVAEDNILQIWQMAEN 407 (424)
Q Consensus 345 wd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~ 407 (424)
||+.++ .+++..+-....|...+-+..... +++....|.|.--.+++.
T Consensus 286 yDleTg--------------t~i~~nrIS~d~iF~ta~~~~~~G-i~~Vnr~GqVl~v~v~~~ 333 (365)
T 2xzh_A 286 YDLETG--------------TCIYMNRISGETIFVTAPHEATAG-IIGVNRKGQVLSVCVEEE 333 (365)
T ss_dssp EETTTC--------------CEEEEEECCSSCEEEEEEEGGGTE-EEEEETTCEEEEEEECTT
T ss_pred EEcccC--------------cEEEEeccCCCceEEecccCCCCc-EEEEcCCCEEEEEEECcc
Confidence 999987 445555544555554454444443 444456776665555443
No 312
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=96.73 E-value=0.76 Score=48.30 Aligned_cols=149 Identities=12% Similarity=0.164 Sum_probs=88.9
Q ss_pred ecCCCCceEEEEe----------CCCcEEEEeCCCCCCCCcccceeeeecCCccEeeEEEecCCCcEEEEEeCCCeEEEE
Q 014454 186 WSKFKEGHLLSGS----------DDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIW 255 (424)
Q Consensus 186 ~~~~~~~~l~s~~----------~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~dg~i~i~ 255 (424)
|..+...+|++|. ..|.|.++++.. ..++.+.... ..++|++++-- +.+++++ ....|++|
T Consensus 839 ~~~~~~~~lvVGTa~~~~~e~~~~~Gri~vf~v~~----~kL~lv~~~~-v~g~v~al~~~--~g~Lla~--ig~~l~vy 909 (1158)
T 3ei3_A 839 LGKDPNTYFIVGTAMVYPEEAEPKQGRIVVFQYSD----GKLQTVAEKE-VKGAVYSMVEF--NGKLLAS--INSTVRLY 909 (1158)
T ss_dssp CTTCCCCEEEEEEEECCTTCSSCCCEEEEEEEEET----TEEEEEEEEE-ESSCEEEEEEE--TTEEEEE--ETTEEEEE
T ss_pred EccCCCEEEEEEeeecCCCCCCCCceEEEEEEEEC----CEEEEEEEEE-cCCcCEEEeee--CCEEEEE--cCCEEEEE
Confidence 4333345788775 357899999872 2333333322 46788888744 2356543 35789999
Q ss_pred EcCCCCCCCCeeeeeccCCCeeEEEecCCCCeEEEEEeCCCcEEEEECCCCCCcceEe--cCCCCCEEEEEEcCCCCcEE
Q 014454 256 DLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATGSTDKTVKLFDLRKISTALHTF--DSHKEEVFQVGWNPKNETIL 333 (424)
Q Consensus 256 d~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~l~tg~~dg~i~iwd~~~~~~~~~~~--~~h~~~v~~~~~sp~~~~~l 333 (424)
++...+. +..-..+-..+..+.....+. +++.|..-..|.++-.+.....+..+ ..+...++++.+-.++ .+
T Consensus 910 ~l~~~~~---L~~~~~~~~~i~~~~l~~~~~-~I~vgD~~~Sv~~~~y~~~~~~L~~~a~D~~~~~vta~~~ld~~--t~ 983 (1158)
T 3ei3_A 910 EWTTEKE---LRTECNHYNNIMALYLKTKGD-FILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEILDDD--NF 983 (1158)
T ss_dssp EECTTSC---EEEEEEECCCSCEEEEEEETT-EEEEEESSBCEEEEEEETTTTEEEEEEECCSCBCEEEEEEEETT--EE
T ss_pred ECCCCce---EEEEeeccccEEEEEEeccCC-EEEEEEhhheEEEEEEEcCCCeEEEEEeecccccEEEEEEEccC--cE
Confidence 9986542 221111111233223222355 58888887778777655422223222 3456688999987654 47
Q ss_pred EEEECCCeEEEeeCCC
Q 014454 334 ASCCLGRRLMVWDLSR 349 (424)
Q Consensus 334 ~s~~~dg~i~iwd~~~ 349 (424)
+.+..+|.+.+.....
T Consensus 984 l~aD~~gNl~vl~~~~ 999 (1158)
T 3ei3_A 984 LGAENAFNLFVCQKDS 999 (1158)
T ss_dssp EEEETTSEEEEEEECT
T ss_pred EEEcCCCcEEEEecCC
Confidence 7789999999988765
No 313
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=96.64 E-value=0.22 Score=43.87 Aligned_cols=105 Identities=9% Similarity=0.126 Sum_probs=51.6
Q ss_pred CCcEEEEEeCC--------CeEEEEEcCCCCCCCCeeeeeccCCCeeEEEecCCCCeEEEEEeC-C-----CcEEEEECC
Q 014454 239 HEYLFGSVGDD--------QYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATGST-D-----KTVKLFDLR 304 (424)
Q Consensus 239 ~~~~~~s~~~d--------g~i~i~d~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~l~tg~~-d-----g~i~iwd~~ 304 (424)
+..+++.|+.+ ..+.+||+.+..- ..+..+......-.++.+ +..+++.|+. + ..+.+||+.
T Consensus 98 ~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W-~~~~~~p~~r~~~~~~~~---~~~iyv~GG~~~~~~~~~~~~~yd~~ 173 (315)
T 4asc_A 98 LNSIYVVGGREIKDGERCLDSVMCYDRLSFKW-GESDPLPYVVYGHTVLSH---MDLVYVIGGKGSDRKCLNKMCVYDPK 173 (315)
T ss_dssp TTEEEEECCEESSTTCCBCCCEEEEETTTTEE-EECCCCSSCCBSCEEEEE---TTEEEEECCBCTTSCBCCCEEEEETT
T ss_pred CCEEEEEeCCcCCCCCcccceEEEECCCCCcE-eECCCCCCcccceeEEEE---CCEEEEEeCCCCCCcccceEEEEeCC
Confidence 34577777632 4588899887541 111111111111222222 3347777776 2 468899987
Q ss_pred CCC-CcceEecCCCCCEEEEEEcCCCCcEEEEEECCC-----eEEEeeCCCC
Q 014454 305 KIS-TALHTFDSHKEEVFQVGWNPKNETILASCCLGR-----RLMVWDLSRI 350 (424)
Q Consensus 305 ~~~-~~~~~~~~h~~~v~~~~~sp~~~~~l~s~~~dg-----~i~iwd~~~~ 350 (424)
+.. ..+..+......-..+.+ ++ .+++.|+.++ .+.+||+.+.
T Consensus 174 ~~~W~~~~~~p~~r~~~~~~~~--~~-~iyv~GG~~~~~~~~~~~~yd~~~~ 222 (315)
T 4asc_A 174 KFEWKELAPMQTARSLFGATVH--DG-RIIVAAGVTDTGLTSSAEVYSITDN 222 (315)
T ss_dssp TTEEEECCCCSSCCBSCEEEEE--TT-EEEEEEEECSSSEEEEEEEEETTTT
T ss_pred CCeEEECCCCCCchhceEEEEE--CC-EEEEEeccCCCCccceEEEEECCCC
Confidence 621 111111111111222222 34 4777777654 4778888764
No 314
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=96.57 E-value=0.44 Score=43.59 Aligned_cols=234 Identities=10% Similarity=0.147 Sum_probs=143.4
Q ss_pred EEecCCCCcEEEEEeCCCeEEEEeCCCCCCCCCCCCCCCCcEEEecC--CCceeEEEecCCCCceEEEEeCCCcEEEEeC
Q 014454 131 ARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGH--STEGYGLSWSKFKEGHLLSGSDDAQICLWDI 208 (424)
Q Consensus 131 ~~~~p~~~~~latg~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~h--~~~v~~l~~~~~~~~~l~s~~~dg~i~iwd~ 208 (424)
.-.+|..+ +||.-. ..++.|||++. . ..++.| ...|.-=.|-... .|+..+ +..|+-|++
T Consensus 71 AIMnP~~~-iiALra-g~~lQiFnle~----------K---~klks~~~~e~VvfWkWis~~--~l~lVT-~taVyHWsi 132 (494)
T 1bpo_A 71 AIMNPASK-VIALKA-GKTLQIFNIEM----------K---SKMKAHTMTDDVTFWKWISLN--TVALVT-DNAVYHWSM 132 (494)
T ss_dssp EEECSSSS-CEEEEE-TTEEEEEETTT----------T---EEEEEEECSSCCCEEEEEETT--EEEEEC-SSEEEEEES
T ss_pred eeeCCCCc-EEEEec-CCeEEEEchHH----------h---hhhcceecCCCceEEEecCCC--eEEEEc-CCeeEEecc
Confidence 44567554 676654 67999999987 1 233333 3567667776543 354444 368999999
Q ss_pred CCCCCCCcccceeeeecCC----ccEeeEEEecCCCcEEEEEe------CCCeEEEEEcCCCCCCCCeeeeeccCCCeeE
Q 014454 209 NAAPKNKSLEAMQIFKVHE----GVVEDVAWHLRHEYLFGSVG------DDQYLLIWDLRTPSVSKPVQSVVAHQSEVNC 278 (424)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~----~~v~~~~~~~~~~~~~~s~~------~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~ 278 (424)
.... .+.+.+..|. ..|..-..+++.+.++++|- ..|.+.+|..+... -+.+.+|......
T Consensus 133 ~~~s-----~P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~~----sQ~ieGhaa~F~~ 203 (494)
T 1bpo_A 133 EGES-----QPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKV----SQPIEGHAASFAQ 203 (494)
T ss_dssp SSSC-----CCEEEEECCGGGTTCEEEEEEECTTSSEEEEEEEEEETTEEEEEEEEEESTTCC----EEEECCSEEEEEE
T ss_pred cCCC-----CchhheecchhcccceEEEEEECCCCCeEEEEeecccCCcccceEEEeeccccc----cchheeeeeeeEE
Confidence 7532 2444454443 46777777888887776663 35788899987644 4556677655544
Q ss_pred EEecCC--CCeEEEEEeCC---CcEEEEECCCC--CCcc------eEec---CCCCCEEEEEEcCCCCcEEEEEECCCeE
Q 014454 279 LAFNPF--NEWILATGSTD---KTVKLFDLRKI--STAL------HTFD---SHKEEVFQVGWNPKNETILASCCLGRRL 342 (424)
Q Consensus 279 v~~~~~--~~~~l~tg~~d---g~i~iwd~~~~--~~~~------~~~~---~h~~~v~~~~~sp~~~~~l~s~~~dg~i 342 (424)
+....+ ...+|+.+... +.++|.++... +.+. ..+. ....-..++..++... ++..-+.-|.|
T Consensus 204 ~~~~g~~~~~~lf~fa~r~~~g~kLhi~Ei~~~~~~~~~f~kk~vdv~fppe~~~DFPvamqvs~kyg-viyviTK~G~i 282 (494)
T 1bpo_A 204 FKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHD-VVFLITKYGYI 282 (494)
T ss_dssp EECTTCSSEEEEEEEEECSTTCCEEEEEECSCCCTTCCCCCCEEEECCCCTTSTTCCEEEEEEETTTT-EEEEEETTSEE
T ss_pred EecCCCCCCceEEEEEEecCCCcEEEEEEcCCCccCCCCccceeeeeeCCcccccCceeEEEecccCC-EEEEEecCceE
Confidence 444321 12355555543 78999998653 1111 1111 1234556788888775 78888999999
Q ss_pred EEeeCCCCCcccCCCCcCCCCCeeeEEEcCCCCCcceEEeCCCCCcEEEEEeCCCcEEEEecCCc
Q 014454 343 MVWDLSRIDEEQTPEDAEDGPPELLFIHGGHTSKISDFSWNPCEDWVISSVAEDNILQIWQMAEN 407 (424)
Q Consensus 343 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~ 407 (424)
++||+.++ .+++..+-....|.-.+-+..... +++....|.|.--.+++.
T Consensus 283 ~lyDleTg--------------t~i~~nrIs~~~iF~t~~~~~~~G-i~~Vnr~GqVl~v~v~e~ 332 (494)
T 1bpo_A 283 HLYDLETG--------------TCIYMNRISGETIFVTAPHEATAG-IIGVNRKGQVLSVCVEEE 332 (494)
T ss_dssp EEEETTTC--------------CEEEEEECCSSCEEEEEEETTTTE-EEEEETTCEEEEEEECTT
T ss_pred EEEecccc--------------eeeeeecccCCceEEecccCCCCc-EEEEccCceEEEEEEccc
Confidence 99999987 445555544555555555555443 444557776665555543
No 315
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=96.53 E-value=0.36 Score=43.40 Aligned_cols=217 Identities=9% Similarity=0.042 Sum_probs=107.2
Q ss_pred CCceeEEEecCCCCceEEEEeCCCcEEEEeCCCCCCCCcccceeeeecCCccEeeEEEecC---CCcEEEEEeC---C--
Q 014454 178 STEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLR---HEYLFGSVGD---D-- 249 (424)
Q Consensus 178 ~~~v~~l~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~---~~~~~~s~~~---d-- 249 (424)
-....+++|.|++. |+++..+|.|.+++. .+. ..+..+............|+++|+ +..++++-+. +
T Consensus 28 l~~P~~ia~~pdG~--l~V~e~~g~I~~~d~-~G~--~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~ 102 (354)
T 3a9g_A 28 LEVPWSIAPLGGGR--YLVTERPGRLVLISP-SGK--KLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGGH 102 (354)
T ss_dssp CSCEEEEEEEETTE--EEEEETTTEEEEECS-SCE--EEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGGC
T ss_pred CCCCeEEEEcCCCe--EEEEeCCCEEEEEeC-CCc--eEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCCC
Confidence 34568999999875 666667799999873 221 111111111112356889999998 5667665542 3
Q ss_pred --CeEEEEEcCCCCC-C---CCe-eeeec-cCCCeeEEEecCCCCeEEEEEeC-------------CCcEEEEECCCCC-
Q 014454 250 --QYLLIWDLRTPSV-S---KPV-QSVVA-HQSEVNCLAFNPFNEWILATGST-------------DKTVKLFDLRKIS- 307 (424)
Q Consensus 250 --g~i~i~d~~~~~~-~---~~~-~~~~~-~~~~v~~v~~~~~~~~~l~tg~~-------------dg~i~iwd~~~~~- 307 (424)
..|..|+...... . +.+ ..+.. .......|+|.|+|. ++++-+. .|.|.-++....-
T Consensus 103 ~~~~v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~-Lyvt~G~~~~~~~~~d~~~~~G~I~ri~~dG~~p 181 (354)
T 3a9g_A 103 IRNRVIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGM-LYITTGDAADPRLAQDLSSLAGKILRVDEEGRPP 181 (354)
T ss_dssp EEEEEEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSC-EEEECCCTTCGGGGTCTTCCSSEEEEECTTSCCC
T ss_pred cceEEEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCc-EEEEECCCCCCccccCCCCCCeEEEEEcCCCCCC
Confidence 5677777764310 0 011 11111 112356799999997 5555332 2455555544210
Q ss_pred --C---cceEe-cCCCCCEEEEEEcC-CCCcEEEEEECCC---eEEEeeCCCCCccc---C-CCCcCCCCCeeeEEE-cC
Q 014454 308 --T---ALHTF-DSHKEEVFQVGWNP-KNETILASCCLGR---RLMVWDLSRIDEEQ---T-PEDAEDGPPELLFIH-GG 372 (424)
Q Consensus 308 --~---~~~~~-~~h~~~v~~~~~sp-~~~~~l~s~~~dg---~i~iwd~~~~~~~~---~-~~~~~~~~~~~~~~~-~~ 372 (424)
. ....+ .++ .....++|+| .+ .++++-...+ .|.+.. .+...- . ...........+..+ ..
T Consensus 182 ~~npf~~~~i~a~G~-rnp~Gla~d~~~g-~l~v~d~g~~~~dei~~i~--~G~nyGwp~~~g~~~~~~~~~p~~~~~~~ 257 (354)
T 3a9g_A 182 ADNPFPNSPIWSYGH-RNPQGIDWHRASG-VMVATEHGPVGHDEVNIIL--KGGNYGWPLATGKAGRGEFVDPVIDTGSE 257 (354)
T ss_dssp TTSSSTTCCEEEECC-SCCCEEEECTTTC-CEEEEECCSSSCCEEEEEC--TTCBCCTTTCCSCCCCTTSCCCSEECTTC
T ss_pred CCCCCCCCcEEEEcc-CCcceEEEeCCCC-CEEEEecCCCCCcEEEEec--CCCcCCCCcccCCCCCCCCcCCEeecCCC
Confidence 0 01111 123 2356899999 55 4554433222 233322 211000 0 000000001122233 22
Q ss_pred CCCCcceEEeC-------CCCCcEEEEEeCCCcEEEEecCC
Q 014454 373 HTSKISDFSWN-------PCEDWVISSVAEDNILQIWQMAE 406 (424)
Q Consensus 373 h~~~v~~~~~~-------~~~~~~l~s~~~dg~i~vw~~~~ 406 (424)
| .....++|. .++. ++++.-..+.|...++..
T Consensus 258 ~-~ap~G~~~y~g~~fp~~~G~-l~v~~~~~~~v~~~~~~~ 296 (354)
T 3a9g_A 258 T-WAPSGASFVHGDMFPGLRGW-LLIACLRGSMLAAVNFGD 296 (354)
T ss_dssp C-CCEEEEEECCSSSCGGGTTE-EEEEETTTTEEEEEEECG
T ss_pred C-cCCcceEEECCCCCcccCCc-EEEEEcCCCEEEEEEECC
Confidence 2 346777773 4565 566656667787777764
No 316
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=96.38 E-value=0.51 Score=42.13 Aligned_cols=244 Identities=11% Similarity=0.088 Sum_probs=124.1
Q ss_pred cCCceeEEEecCCCCcEEEEEeCCCeEEEEeCCCCCCCCCCCCCCCCcEEE----ecCCCceeEEEecCC---CCceEEE
Q 014454 124 HDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRL----RGHSTEGYGLSWSKF---KEGHLLS 196 (424)
Q Consensus 124 h~~~v~~~~~~p~~~~~latg~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~----~~h~~~v~~l~~~~~---~~~~l~s 196 (424)
.-.....|+|.|++. ++++-...|.|++++... +....+..+ .........|+++|+ +. .|+.
T Consensus 30 gL~~P~~ia~~pdG~-llVter~~G~I~~v~~~~--------g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g-~lYv 99 (347)
T 3das_A 30 GLNSPWGLAPLPGGD-LLVSSRDEATITRVDAKT--------GRKTELGEVPGVSPSGEGGLLGIALSPDYASDH-MVYA 99 (347)
T ss_dssp CCSSEEEEEECTTSC-EEEEETTTCEEEEECTTT--------CCEEEEEECTTCCCBTTBSEEEEEECTTHHHHC-EEEE
T ss_pred CCCCceEEEEcCCCc-EEEEEecCCEEEEEECCC--------CcEeeecccCceeecCCCCceeeEeccccccCC-EEEE
Confidence 346778999999986 666644489999987543 111111111 123456789999995 33 3443
Q ss_pred E---eCCCcEEEEeCCCCC----CCCcccc-eeeee-cCCccEeeEEEecCCCcEEEEEeC-------------CCeEEE
Q 014454 197 G---SDDAQICLWDINAAP----KNKSLEA-MQIFK-VHEGVVEDVAWHLRHEYLFGSVGD-------------DQYLLI 254 (424)
Q Consensus 197 ~---~~dg~i~iwd~~~~~----~~~~~~~-~~~~~-~~~~~v~~~~~~~~~~~~~~s~~~-------------dg~i~i 254 (424)
. ..++.|.-|.+.... .....+. +..+. ........|+|.|++. |+++.+. .|.|.-
T Consensus 100 ~yt~~~~~~v~R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG~-Lyvt~Gd~~~~~~~qd~~~~~G~IlR 178 (347)
T 3das_A 100 YFTSASDNRIVRMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDKM-LYAGTGESGDTGLSQDRKSLGGKILR 178 (347)
T ss_dssp EEECSSSEEEEEEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTSC-EEEECBCTTCGGGTTCTTCSTTCEEE
T ss_pred EEecCCCCEEEEEEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCCCC-EEEEECCCCCCccccCCCCCCCEEEE
Confidence 2 244566666665421 1111111 11121 1112346799999985 5555442 355555
Q ss_pred EEcCCCCC------CCCeeeeeccCCCeeEEEecCCCCeEEEEE-eCCCcEEEEECCCC-----------------CCcc
Q 014454 255 WDLRTPSV------SKPVQSVVAHQSEVNCLAFNPFNEWILATG-STDKTVKLFDLRKI-----------------STAL 310 (424)
Q Consensus 255 ~d~~~~~~------~~~~~~~~~~~~~v~~v~~~~~~~~~l~tg-~~dg~i~iwd~~~~-----------------~~~~ 310 (424)
++....-. ...+. ..+|. ....++|+|++. ++++- +.++.=.|--+... ..++
T Consensus 179 i~~dG~ip~~nPf~~~~i~-a~G~R-Np~Gla~dp~G~-L~~~d~g~~~~deln~i~~G~nyGwP~~~g~~~~~~~~~P~ 255 (347)
T 3das_A 179 MTPDGEPAPGNPFPGSPVY-SYGHR-NVQGLAWDDKQR-LFASEFGQDTWDELNAIKPGDNYGWPEAEGKGGGSGFHDPV 255 (347)
T ss_dssp ECTTSSBCTTCSSTTCCEE-EBCCS-BCCEEEECTTCC-EEEEECCSSSCEEEEEECTTCBCCTTTCCSSCCCTTCCCCS
T ss_pred EeCCCCccCCCCCCCCeEE-eeCCC-CcceEEECCCCC-EEEEecCCCCCceeeEEcCCCEecCCcccCCCCCccccCCc
Confidence 55442100 00111 12332 356899999876 44432 22332222222211 1234
Q ss_pred eEecCCCCCEEEEEEcCCCCcEEEEEECCCeEEEeeCCCCCcccCCCCcCCCCCeeeEEEcCCCCCcceEEeCCCCCcEE
Q 014454 311 HTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPEDAEDGPPELLFIHGGHTSKISDFSWNPCEDWVI 390 (424)
Q Consensus 311 ~~~~~h~~~v~~~~~sp~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l 390 (424)
..+..+......++|.. + .++...-..+.|....+...... ......+.+....+.+++..|+|. |+
T Consensus 256 ~~~~~~~~ap~G~~~~~-g-~~~~~~l~~~~l~~v~~~~~~~~----------~~~e~~l~~~~gR~~dv~~~pDG~-ly 322 (347)
T 3das_A 256 AQWSTDEASPSGIAYAE-G-SVWMAGLRGERLWRIPLKGTAAA----------ADPQAFLEGEYGRLRTVAPAGGDK-LW 322 (347)
T ss_dssp EEECTTTCCEEEEEEET-T-EEEEEESTTCSEEEEEEETTEES----------SCCEEESTTTSSCEEEEEEEETTE-EE
T ss_pred EecCCCCCCCcceEEEc-C-ceeeccccCCEEEEEEecCCcee----------cceEEeecCCCCCccEEEECCCCc-EE
Confidence 44443334667888874 3 35555555556655555432110 011122334456789999999998 55
Q ss_pred EEEe
Q 014454 391 SSVA 394 (424)
Q Consensus 391 ~s~~ 394 (424)
++..
T Consensus 323 v~td 326 (347)
T 3das_A 323 LVTS 326 (347)
T ss_dssp EEEC
T ss_pred EEEc
Confidence 5433
No 317
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=96.30 E-value=0.3 Score=40.23 Aligned_cols=136 Identities=10% Similarity=0.044 Sum_probs=74.8
Q ss_pred ceEEEEeCCCcEEEEeCCCCCCCCcc-cceeeeecC--CccEeeEEEecCCCcEEEEEeCCCeEEEEEcCCCCCCCCeee
Q 014454 192 GHLLSGSDDAQICLWDINAAPKNKSL-EAMQIFKVH--EGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQS 268 (424)
Q Consensus 192 ~~l~s~~~dg~i~iwd~~~~~~~~~~-~~~~~~~~~--~~~v~~~~~~~~~~~~~~s~~~dg~i~i~d~~~~~~~~~~~~ 268 (424)
.+|++...| +++.=....... ... .....+ +. =..+.+++|+|++. |.++ .+|.++-.+..+... . .
T Consensus 5 ~~l~~v~~d-~~y~G~~P~~~~-~~~~~~a~~i-G~~gw~~~~~laf~P~G~-LYaV--~~G~Ly~~~~~t~~~-~---~ 74 (236)
T 1tl2_A 5 SMLRGVYQD-KFYQGTYPQNKN-DNWLARATLI-GKGGWSNFKFLFLSPGGE-LYGV--LNDKIYKGTPPTHDN-D---N 74 (236)
T ss_dssp CCEEEEETT-EEEEESCCCSTT-CCHHHHSEEE-ESSSCTTCSEEEECTTSC-EEEE--ETTEEEEESCCCSTT-C---C
T ss_pred eEEEEEeCC-cEEecCCCCCcc-cchhhhcccc-CccccccceeEEECCCcc-EEEE--eCCeEEEECCCCCCc-c---c
Confidence 367777777 665544433322 111 111111 12 24778999999775 7655 778777666544221 0 1
Q ss_pred eeccCCC--------eeEEEecCCCCeEEEEEeCCCcEEEEECCCCCCc-----ceEe-cCCCCCEEEEEEcCCCCcEEE
Q 014454 269 VVAHQSE--------VNCLAFNPFNEWILATGSTDKTVKLFDLRKISTA-----LHTF-DSHKEEVFQVGWNPKNETILA 334 (424)
Q Consensus 269 ~~~~~~~--------v~~v~~~~~~~~~l~tg~~dg~i~iwd~~~~~~~-----~~~~-~~h~~~v~~~~~sp~~~~~l~ 334 (424)
....... ..++.|+|+|. +.++ .||.|+-++-.+.... -..+ ..-=..+..|.+.|+|- |.
T Consensus 75 W~~s~t~IG~~Gw~~F~a~~fD~~G~-LYav--~dG~iyr~~pP~~~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~--Ly 149 (236)
T 1tl2_A 75 WMGRAKKIGNGGWNQFQFLFFDPNGY-LYAV--SKDKLYKASPPQSDTDNWIARATEVGSGGWSGFKFLFFHPNGY--LY 149 (236)
T ss_dssp HHHHCEEEECSCGGGCSEEEECTTSC-EEEE--ETTEEEEESCCCSTTCCHHHHSEEEECSSGGGEEEEEECTTSC--EE
T ss_pred ccccccEecccccccceEEEECCCCC-EEEe--CCCEEEEeCCCcCCCCceeccccEeccCCCCceEEEEECCCce--EE
Confidence 1111122 47899999987 4545 5698887775331111 0111 11114679999999994 44
Q ss_pred EEECCCeEE
Q 014454 335 SCCLGRRLM 343 (424)
Q Consensus 335 s~~~dg~i~ 343 (424)
+.. |+.+.
T Consensus 150 av~-dg~ly 157 (236)
T 1tl2_A 150 AVH-GQQFY 157 (236)
T ss_dssp EEE-TTEEE
T ss_pred EEe-CCcEE
Confidence 444 88743
No 318
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=96.24 E-value=0.48 Score=50.05 Aligned_cols=207 Identities=13% Similarity=0.219 Sum_probs=120.5
Q ss_pred EEEecCCCCceEEEEeCCCcEEEEeCCCCCCCCcccceeeeecCCccEeeEEEecCCCcEEEEEeCCCeEEEEEcCCCCC
Q 014454 183 GLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSV 262 (424)
Q Consensus 183 ~l~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~dg~i~i~d~~~~~~ 262 (424)
+.-.+|..+ .++.-. ..++.|+|+++..+..... ...+|.--.|-.... ++-. .+..|+-|++....
T Consensus 70 sAIMnP~~~-iiALra-g~~lQiFnl~~k~klks~~-------~~e~VvfWkWis~~~--l~lV-T~~aVyHW~~~~~s- 136 (1630)
T 1xi4_A 70 SAIMNPASK-VIALKA-GKTLQIFNIEMKSKMKAHT-------MTDDVTFWKWISLNT--VALV-TDNAVYHWSMEGES- 136 (1630)
T ss_pred hhccCCCcc-eEEEec-CCeEEEeehHHhhhhcccc-------cCCCceEEEecCCCe--eEEE-cCCeEEEeccCCCC-
Confidence 344567554 455443 6899999998765433321 245677777766543 3333 35689999997533
Q ss_pred CCCeeeeecc----CCCeeEEEecCCCCeEEEEEe------CCCcEEEEECCCCCCcceEecCCCCCEEEEEEc--CCCC
Q 014454 263 SKPVQSVVAH----QSEVNCLAFNPFNEWILATGS------TDKTVKLFDLRKISTALHTFDSHKEEVFQVGWN--PKNE 330 (424)
Q Consensus 263 ~~~~~~~~~~----~~~v~~v~~~~~~~~~l~tg~------~dg~i~iwd~~~~~~~~~~~~~h~~~v~~~~~s--p~~~ 330 (424)
.|...+..| ...|..-..+++.++++++|- -.|.+.+|.... ..-+.+.+|.+.-..+... +...
T Consensus 137 -~P~k~fdR~~~L~~~QIinY~~d~~~kW~~l~gi~~~~~~v~G~mQLyS~er--~~sQ~iegha~~F~~~~~~~~~~~~ 213 (1630)
T 1xi4_A 137 -QPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDR--KVSQPIEGHAASFAQFKMEGNAEES 213 (1630)
T ss_pred -ccHHHHhcchhcccCeeEEeeeCCCCCeEEEEeeccCCCcccceeeeeeccc--ccchhhhHhHhhhheeccCCCCCCc
Confidence 344444333 456777778899998887775 358899999875 4445566665544333332 2222
Q ss_pred cEEEEEEC---CCeEEEeeCCCCCcc-cCCCCcCCCCCeeeEEEcCCCCCcceEEeCCCCCcEEEEEeCCCcEEEEecCC
Q 014454 331 TILASCCL---GRRLMVWDLSRIDEE-QTPEDAEDGPPELLFIHGGHTSKISDFSWNPCEDWVISSVAEDNILQIWQMAE 406 (424)
Q Consensus 331 ~~l~s~~~---dg~i~iwd~~~~~~~-~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~vw~~~~ 406 (424)
.+++.+.. .+.++|-++...... .... .....+.+....-......+..++.-. ++.....-|.|.++|+.+
T Consensus 214 ~l~~f~~~~~~g~kLhi~Ei~~~~~~~~~f~---kk~~~~~~~~~~~~Dfpv~~~vs~k~g-~iy~itk~G~~~~~d~~t 289 (1630)
T 1xi4_A 214 TLFCFAVRGQAGGKLHIIEVGTPPTGNQPFP---KKAVDVFFPPEAQNDFPVAMQISEKHD-VVFLITKYGYIHLYDLET 289 (1630)
T ss_pred eEEEEEEecCCCceEEEEecCCCccCCCCCc---cccccccCCcccccCcceEEEeccccC-EEEEEecCceEEEEeccc
Confidence 34433322 368999998653110 0000 000011111112233345566777666 677778899999999999
Q ss_pred ccC
Q 014454 407 NIY 409 (424)
Q Consensus 407 ~~~ 409 (424)
+..
T Consensus 290 ~~~ 292 (1630)
T 1xi4_A 290 GTC 292 (1630)
T ss_pred chh
Confidence 854
No 319
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=96.13 E-value=0.23 Score=43.55 Aligned_cols=149 Identities=9% Similarity=0.084 Sum_probs=70.8
Q ss_pred CcEEEEEeCC-----CeEEEEEcCCCCCCCCeeeeeccCCCeeEEEecCCCCeEEEEEeCC-----CcEEEEECCCCC-C
Q 014454 240 EYLFGSVGDD-----QYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATGSTD-----KTVKLFDLRKIS-T 308 (424)
Q Consensus 240 ~~~~~s~~~d-----g~i~i~d~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~l~tg~~d-----g~i~iwd~~~~~-~ 308 (424)
..+++.|+.+ ..+.+||+.+..- ..+..+......-.++.+ +..+++.|+.+ ..+.+||+.+.. .
T Consensus 122 ~~iyv~GG~~~~~~~~~~~~yd~~~~~W-~~~~~~p~~r~~~~~~~~---~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~ 197 (308)
T 1zgk_A 122 GHIYAVGGSHGCIHHNSVERYEPERDEW-HLVAPMLTRRIGVGVAVL---NRLLYAVGGFDGTNRLNSAECYYPERNEWR 197 (308)
T ss_dssp TEEEEECCEETTEECCCEEEEETTTTEE-EECCCCSSCCBSCEEEEE---TTEEEEECCBCSSCBCCCEEEEETTTTEEE
T ss_pred CEEEEEcCCCCCcccccEEEECCCCCeE-eECCCCCccccceEEEEE---CCEEEEEeCCCCCCcCceEEEEeCCCCeEe
Confidence 3576676643 4588899876541 111111111111222333 33477777754 458899987521 1
Q ss_pred cceEecCCCCCEEEEEEcCCCCcEEEEEECC-----CeEEEeeCCCCCcccCCCCcCCCCCeeeEEEcCCCCCcceEEeC
Q 014454 309 ALHTFDSHKEEVFQVGWNPKNETILASCCLG-----RRLMVWDLSRIDEEQTPEDAEDGPPELLFIHGGHTSKISDFSWN 383 (424)
Q Consensus 309 ~~~~~~~h~~~v~~~~~sp~~~~~l~s~~~d-----g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~ 383 (424)
.+..+......-..+.+ ++ .+++.|+.+ ..+.+||+.+..-.... ...........+.+
T Consensus 198 ~~~~~p~~r~~~~~~~~--~~-~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~------------~~p~~r~~~~~~~~- 261 (308)
T 1zgk_A 198 MITAMNTIRSGAGVCVL--HN-CIYAAGGYDGQDQLNSVERYDVETETWTFVA------------PMKHRRSALGITVH- 261 (308)
T ss_dssp ECCCCSSCCBSCEEEEE--TT-EEEEECCBCSSSBCCCEEEEETTTTEEEECC------------CCSSCCBSCEEEEE-
T ss_pred eCCCCCCccccceEEEE--CC-EEEEEeCCCCCCccceEEEEeCCCCcEEECC------------CCCCCccceEEEEE-
Confidence 11111111112222333 34 477777654 45888888764321110 00000011111222
Q ss_pred CCCCcEEEEEeCC-----CcEEEEecCCccCC
Q 014454 384 PCEDWVISSVAED-----NILQIWQMAENIYH 410 (424)
Q Consensus 384 ~~~~~~l~s~~~d-----g~i~vw~~~~~~~~ 410 (424)
++. +++.|+.+ ..+.+||+.++...
T Consensus 262 -~~~-i~v~GG~~~~~~~~~v~~yd~~~~~W~ 291 (308)
T 1zgk_A 262 -QGR-IYVLGGYDGHTFLDSVECYDPDTDTWS 291 (308)
T ss_dssp -TTE-EEEECCBCSSCBCCEEEEEETTTTEEE
T ss_pred -CCE-EEEEcCcCCCcccceEEEEcCCCCEEe
Confidence 344 67777643 45788888877554
No 320
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=96.12 E-value=0.71 Score=41.39 Aligned_cols=152 Identities=11% Similarity=0.109 Sum_probs=80.9
Q ss_pred CceeEEEecCCCCceEEEEeCCCcEEEEeCCCCCCCCcccce-eeeecCCccEeeEEEecC---CCcEEEEEeC------
Q 014454 179 TEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAM-QIFKVHEGVVEDVAWHLR---HEYLFGSVGD------ 248 (424)
Q Consensus 179 ~~v~~l~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~-~~~~~~~~~v~~~~~~~~---~~~~~~s~~~------ 248 (424)
....+|+|.|++.. |+++...|.|++++...... ..+..+ ............|+++|+ +..++++-..
T Consensus 18 ~~P~~i~~~pdG~~-l~V~e~~G~i~~~~~~g~~~-~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~~~~~~~~g~ 95 (353)
T 2g8s_A 18 DHPWALAFLPDNHG-MLITLRGGELRHWQAGKGLS-APLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLSYSEVGDDGK 95 (353)
T ss_dssp SSEEEEEECSTTCC-EEEEETTTEEEEEETTTEEC-CCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEEEEEEEECSSSC
T ss_pred CCcEEEEEcCCCCE-EEEEeCCceEEEEeCCCcee-eEecCCcccccCCCCCceeEEECCCCCCCCEEEEEEeCCCCCCC
Confidence 35689999998863 66667789999998532211 111111 111122346789999996 5667666443
Q ss_pred -CCeEEEEEcCCCCC-CCCeeee----e---ccCCCeeEEEecCCCCeEEEEEeC-------------CCcEEEEECCCC
Q 014454 249 -DQYLLIWDLRTPSV-SKPVQSV----V---AHQSEVNCLAFNPFNEWILATGST-------------DKTVKLFDLRKI 306 (424)
Q Consensus 249 -dg~i~i~d~~~~~~-~~~~~~~----~---~~~~~v~~v~~~~~~~~~l~tg~~-------------dg~i~iwd~~~~ 306 (424)
...|..|++..... ......+ . ........|+|.|+|. ++++-+. .|.|.-+|....
T Consensus 96 ~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~pdG~-Lyv~~Gd~~~~~~~q~~~~~~g~I~ri~~dG~ 174 (353)
T 2g8s_A 96 AGTAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDGKGY-LFIALGENNQRPTAQDLDKLQGKLVRLTDQGE 174 (353)
T ss_dssp EEEEEEEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECSSSE-EEEEECCTTCGGGGGCTTSCTTEEEEEETTSC
T ss_pred ceeEEEEEEECCCCCCCCceEEEEEECCCCCCCcccCccEEECCCCc-EEEEECCCCCCCccCCCCCCCeEEEEECCCCC
Confidence 23566666653310 0001111 1 1112246799999995 5555433 246766776531
Q ss_pred C---C--------cceEec-CCCCCEEEEEEcC-CCCcEEEE
Q 014454 307 S---T--------ALHTFD-SHKEEVFQVGWNP-KNETILAS 335 (424)
Q Consensus 307 ~---~--------~~~~~~-~h~~~v~~~~~sp-~~~~~l~s 335 (424)
- . ....+. ++ .....++|+| .+ .++++
T Consensus 175 ~p~~npf~~~~~~~~~i~a~G~-rnp~gl~~d~~~g-~l~~~ 214 (353)
T 2g8s_A 175 IPDDNPFIKESGVRAEIWSYGI-RNPQGMAMNPWSN-ALWLN 214 (353)
T ss_dssp CCTTCTTTTSTTSCTTEEEECC-SEEEEEEEETTTT-EEEEE
T ss_pred CCCCCCCcCCCCCCccEEEEcC-cCccceEEECCCC-CEEEE
Confidence 0 0 111121 22 3468899999 55 44444
No 321
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=96.11 E-value=0.45 Score=41.81 Aligned_cols=104 Identities=14% Similarity=0.178 Sum_probs=48.9
Q ss_pred CcEEEEEeCC-------CeEEEEEcCCCCCCCCeeeeeccCCCeeEEEecCCCCeEEEEEeC------CCcEEEEECCCC
Q 014454 240 EYLFGSVGDD-------QYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATGST------DKTVKLFDLRKI 306 (424)
Q Consensus 240 ~~~~~s~~~d-------g~i~i~d~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~l~tg~~------dg~i~iwd~~~~ 306 (424)
..+++.|+.+ ..+.+||+.+..- ..+..+......-.++. .++ .+++.|+. -..+.+||+.+.
T Consensus 110 ~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W-~~~~~~p~~r~~~~~~~--~~~-~iyv~GG~~~~~~~~~~~~~yd~~~~ 185 (318)
T 2woz_A 110 DKIYVVAGKDLQTEASLDSVLCYDPVAAKW-SEVKNLPIKVYGHNVIS--HNG-MIYCLGGKTDDKKCTNRVFIYNPKKG 185 (318)
T ss_dssp TEEEEEEEEBTTTCCEEEEEEEEETTTTEE-EEECCCSSCEESCEEEE--ETT-EEEEECCEESSSCBCCCEEEEETTTT
T ss_pred CEEEEEcCccCCCCcccceEEEEeCCCCCE-eECCCCCCcccccEEEE--ECC-EEEEEcCCCCCCCccceEEEEcCCCC
Confidence 4577777754 3478888876541 11111111001111222 224 46777764 235899998762
Q ss_pred C-CcceEecCCCCCEEEEEEcCCCCcEEEEEECC-----CeEEEeeCCCC
Q 014454 307 S-TALHTFDSHKEEVFQVGWNPKNETILASCCLG-----RRLMVWDLSRI 350 (424)
Q Consensus 307 ~-~~~~~~~~h~~~v~~~~~sp~~~~~l~s~~~d-----g~i~iwd~~~~ 350 (424)
. ..+..+......-..+.+ ++ .+++.|+.+ ..+.+||+.+.
T Consensus 186 ~W~~~~~~p~~r~~~~~~~~--~~-~iyv~GG~~~~~~~~~~~~yd~~~~ 232 (318)
T 2woz_A 186 DWKDLAPMKTPRSMFGVAIH--KG-KIVIAGGVTEDGLSASVEAFDLKTN 232 (318)
T ss_dssp EEEEECCCSSCCBSCEEEEE--TT-EEEEEEEEETTEEEEEEEEEETTTC
T ss_pred EEEECCCCCCCcccceEEEE--CC-EEEEEcCcCCCCccceEEEEECCCC
Confidence 1 111111111111122222 34 467777643 24678888764
No 322
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=96.00 E-value=0.69 Score=48.89 Aligned_cols=195 Identities=9% Similarity=0.141 Sum_probs=112.5
Q ss_pred EecCCCCcEEEEEeCCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCceeEEEecCCCCceEEEEeCCCcEEEEeCCCC
Q 014454 132 RYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAA 211 (424)
Q Consensus 132 ~~~p~~~~~latg~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~iwd~~~~ 211 (424)
-.+|..+ +||.-. ..++.|||+.+. ....... ....|.-=.|-.... |+..+ +..|.-|++...
T Consensus 72 IMnP~~~-iiALra-g~~lQiFnl~~k----------~klks~~-~~e~VvfWkWis~~~--l~lVT-~~aVyHW~~~~~ 135 (1630)
T 1xi4_A 72 IMNPASK-VIALKA-GKTLQIFNIEMK----------SKMKAHT-MTDDVTFWKWISLNT--VALVT-DNAVYHWSMEGE 135 (1630)
T ss_pred ccCCCcc-eEEEec-CCeEEEeehHHh----------hhhcccc-cCCCceEEEecCCCe--eEEEc-CCeEEEeccCCC
Confidence 3456553 666644 679999999871 1122222 234566667765443 44433 358999999753
Q ss_pred CCCCcccceeeeecC----CccEeeEEEecCCCcEEEEEe------CCCeEEEEEcCCCCCCCCeeeeeccCCCeeEEEe
Q 014454 212 PKNKSLEAMQIFKVH----EGVVEDVAWHLRHEYLFGSVG------DDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAF 281 (424)
Q Consensus 212 ~~~~~~~~~~~~~~~----~~~v~~~~~~~~~~~~~~s~~------~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~v~~ 281 (424)
. .+.+.+..| ...|..-..+++.+.++++|- ..|.+.+|.+..+.. +.+.+|-.....+..
T Consensus 136 s-----~P~k~fdR~~~L~~~QIinY~~d~~~kW~~l~gi~~~~~~v~G~mQLyS~er~~s----Q~iegha~~F~~~~~ 206 (1630)
T 1xi4_A 136 S-----QPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKVS----QPIEGHAASFAQFKM 206 (1630)
T ss_pred C-----ccHHHHhcchhcccCeeEEeeeCCCCCeEEEEeeccCCCcccceeeeeecccccc----hhhhHhHhhhheecc
Confidence 2 223333333 356777777888887776653 458899998876542 333455444433333
Q ss_pred c--CCCCeEEEEEeC---CCcEEEEECCCC--CCcce------EecC---CCCCEEEEEEcCCCCcEEEEEECCCeEEEe
Q 014454 282 N--PFNEWILATGST---DKTVKLFDLRKI--STALH------TFDS---HKEEVFQVGWNPKNETILASCCLGRRLMVW 345 (424)
Q Consensus 282 ~--~~~~~~l~tg~~---dg~i~iwd~~~~--~~~~~------~~~~---h~~~v~~~~~sp~~~~~l~s~~~dg~i~iw 345 (424)
. +....+++.+.. .+.++|-++... +.+.. .+.. ...-..++..++..+ ++..-+.-|.|.+|
T Consensus 207 ~~~~~~~~l~~f~~~~~~g~kLhi~Ei~~~~~~~~~f~kk~~~~~~~~~~~~Dfpv~~~vs~k~g-~iy~itk~G~~~~~ 285 (1630)
T 1xi4_A 207 EGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHD-VVFLITKYGYIHLY 285 (1630)
T ss_pred CCCCCCceEEEEEEecCCCceEEEEecCCCccCCCCCccccccccCCcccccCcceEEEeccccC-EEEEEecCceEEEE
Confidence 2 112223333322 268899888543 11111 1111 123345677777664 77788889999999
Q ss_pred eCCCCCc
Q 014454 346 DLSRIDE 352 (424)
Q Consensus 346 d~~~~~~ 352 (424)
|+.++..
T Consensus 286 d~~t~~~ 292 (1630)
T 1xi4_A 286 DLETGTC 292 (1630)
T ss_pred ecccchh
Confidence 9999754
No 323
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=95.89 E-value=1 Score=41.12 Aligned_cols=149 Identities=12% Similarity=0.144 Sum_probs=91.8
Q ss_pred CCCCcEEEEEeCCCeEEEEeCCCCCCCCCCCCCCCCcEEEecC---C-CceeEEEecCCCCceEEEEeCCCcEEEEeCCC
Q 014454 135 PQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGH---S-TEGYGLSWSKFKEGHLLSGSDDAQICLWDINA 210 (424)
Q Consensus 135 p~~~~~latg~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~h---~-~~v~~l~~~~~~~~~l~s~~~dg~i~iwd~~~ 210 (424)
.++..+++. .++.||.-++.. . ...+.+..- . ..+..+..+|+|. +||..+ +..|.|-.+-.
T Consensus 30 ~n~t~i~~a--~~n~iR~~~i~~--------~--~~Yk~L~~~~~i~f~~i~qlvlSpsG~-lLAl~g-~~~V~Vv~LP~ 95 (452)
T 3pbp_A 30 QNGTRIVFI--QDNIIRWYNVLT--------D--SLYHSLNFSRHLVLDDTFHVISSTSGD-LLCLFN-DNEIFVMEVPW 95 (452)
T ss_dssp TTTTEEEEE--ETTEEEEEETTT--------C--SSCEEEECTTTCCCCTTCEEEECTTSS-EEEEEC-SSEEEEEECCT
T ss_pred cCCCEEEEE--ECCEEEEEECCC--------C--CcceEEecCcccccCceeEEEECCCCC-EEEEec-CCeEEEEEecC
Confidence 345444443 357888888875 1 123334332 2 2678899999988 566654 46889988874
Q ss_pred CCCCCc-------ccceeeeec------CCccEeeEEEecCCCc--EEEEEeCCCeEEEEEcCCCCCCCCeeeee-----
Q 014454 211 APKNKS-------LEAMQIFKV------HEGVVEDVAWHLRHEY--LFGSVGDDQYLLIWDLRTPSVSKPVQSVV----- 270 (424)
Q Consensus 211 ~~~~~~-------~~~~~~~~~------~~~~v~~~~~~~~~~~--~~~s~~~dg~i~i~d~~~~~~~~~~~~~~----- 270 (424)
+..... ++ .+.+.- ...+|..+.|||-+.. .+++-..|+.|++||+.... ..|. .+.
T Consensus 96 ~~~~~~~~~~~~~~q-~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~s~-~~P~-~L~k~~~~ 172 (452)
T 3pbp_A 96 GYSNVEDVSIQDAFQ-IFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILNSQ-EKPI-VLNKPNNS 172 (452)
T ss_dssp TCSCCCCHHHHHTTE-EEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTCTT-SCCE-EESCCCSE
T ss_pred ccccCcccccccccc-eeEEEcCCcccCCCCceeEEEeccccCCCCeEEEEecCCEEEEEEcccCC-CCCc-chhccccc
Confidence 322111 11 112221 2467999999997643 56688899999999998733 2233 221
Q ss_pred ----ccCCCeeEEEecCCCCeEEEEEe--CCCcEEEE
Q 014454 271 ----AHQSEVNCLAFNPFNEWILATGS--TDKTVKLF 301 (424)
Q Consensus 271 ----~~~~~v~~v~~~~~~~~~l~tg~--~dg~i~iw 301 (424)
.....|.+++|.+++- .|...+ ..|.|+-.
T Consensus 173 fg~d~~~~ev~S~~Fg~~~l-TLYvl~~t~~GDIYAl 208 (452)
T 3pbp_A 173 FGLDARVNDITDLEFSKDGL-TLYCLNTTEGGDIFAF 208 (452)
T ss_dssp EESCSSCCCEEEEEECTTSS-CEEEEECTTSCEEEEE
T ss_pred cCCCcccceEEEEEEcCCCc-EEEEEecCCCCCEEEE
Confidence 2235788999998654 355544 67777654
No 324
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=95.70 E-value=2.6 Score=44.36 Aligned_cols=199 Identities=12% Similarity=0.058 Sum_probs=101.5
Q ss_pred cEEEEEEeccCCceeEEEecCCC-----CcEEEEEeC-CCeEEEEeCCCCCCCCCCCCCCCCcE--EEecCCCceeEEEe
Q 014454 115 KVQIIQQINHDGEVNRARYMPQN-----PFLIATKTV-SAEVYVFDYSKHPSKPPLDGACSPDL--RLRGHSTEGYGLSW 186 (424)
Q Consensus 115 ~~~~~~~~~h~~~v~~~~~~p~~-----~~~latg~~-dg~v~iw~~~~~~~~~~~~~~~~~~~--~~~~h~~~v~~l~~ 186 (424)
.+.......-.+.|.|+++.|.. ..++|+|.. |++|+|+++.. ..... .+. ......++.+
T Consensus 543 ~L~~~~~~~l~~evscl~i~~~~~~~~~s~~~aVg~~~d~tv~I~sL~~----------l~~~~~~~L~-~~~~p~si~l 611 (1158)
T 3ei3_A 543 ELRQISHTEMEHEVACLDITPLGDSNGLSPLCAIGLWTDISARILKLPS----------FELLHKEMLG-GEIIPRSILM 611 (1158)
T ss_dssp EEEEEEEEECSSCEEEEECCCCSSSTTCCSEEEEEETTTTEEEEEETTT----------CCEEEEEECC-SSCCEEEEEE
T ss_pred ceeeecccCCCCceEEEEeecCCCCcccccEEEEEECCCCEEEEEECCC----------CCeEEEEECC-CCCCCcEEEE
Confidence 44555556667899999998642 358899996 99999999975 12121 121 1123334433
Q ss_pred cC-CCCceEEEEeCCCcEEEEeCCCCCCCCcccceeeeecCCccEeeEEEecCCCcEEEEEeCCCeEEEEEcCCCCCCCC
Q 014454 187 SK-FKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKP 265 (424)
Q Consensus 187 ~~-~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~dg~i~i~d~~~~~~~~~ 265 (424)
.. .+..+|..|-.||.+.-+.+.... ..+...+...--..++.=..+...+..-+.+++ +....+|--+. .
T Consensus 612 ~~~~~~~~L~igl~dG~l~~~~~d~~t--g~l~d~r~~~LG~~pv~L~~~~~~~~~~V~a~s-~rp~liy~~~~-~---- 683 (1158)
T 3ei3_A 612 TTFESSHYLLCALGDGALFYFGLNIET--GLLSDRKKVTLGTQPTVLRTFRSLSTTNVFACS-DRPTVIYSSNH-K---- 683 (1158)
T ss_dssp EEETTEEEEEEEETTSEEEEEEECTTT--CCEEEEEEEECCSSCCEEEEEESSSCEEEEEES-SSCEEEEESSS-S----
T ss_pred EEeCCCcEEEEEeCCCeEEEEEEcCCC--CccccceeEEcCCCceEEEEEeeCCceeEEEEC-CCCEEEEEcCC-c----
Confidence 22 133478899999998776654321 111111111111234443334433333322333 34444444322 1
Q ss_pred eeeeeccCCCeeEE-EecCCC-CeEEEEEeCCCcEEEEECCCCCC-cceEecCCCCCEEEEEEcCCCCcEEE
Q 014454 266 VQSVVAHQSEVNCL-AFNPFN-EWILATGSTDKTVKLFDLRKIST-ALHTFDSHKEEVFQVGWNPKNETILA 334 (424)
Q Consensus 266 ~~~~~~~~~~v~~v-~~~~~~-~~~l~tg~~dg~i~iwd~~~~~~-~~~~~~~h~~~v~~~~~sp~~~~~l~ 334 (424)
+....-.-..+.++ .|+... +.-++.. .++.++|.-+....+ .++++.. ...+..++++|..+.+.+
T Consensus 684 l~~s~l~~~~v~~~~~F~se~~~~g~v~~-~~~~LrI~~i~~~~~~~~~~ipL-~~Tprri~y~~~~~~~~v 753 (1158)
T 3ei3_A 684 LVFSNVNLKEVNYMCPLNSDGYPDSLALA-NNSTLTIGTIDEIQKLHIRTVPL-YESPRKICYQEVSQCFGV 753 (1158)
T ss_dssp EEEEEBSSSCCCEEEEECCSSSTTEEEEE-CSSCEEEEEECCSSSEEEEEEEC-SSEEEEEEEEGGGTEEEE
T ss_pred eEEeccChHHhceEeccCcccCCCcEEEE-cCCceEEEEecccCCeeEEEEeC-CCCceEEEEcCCCCEEEE
Confidence 22111122234333 353321 1124333 355699988865332 2333333 568899999998864333
No 325
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=95.65 E-value=0.8 Score=42.68 Aligned_cols=110 Identities=10% Similarity=0.109 Sum_probs=60.9
Q ss_pred CCCceeEEEecCCCCceEEEEeCC-CcEEEEeCCCCCCCCcccceeeee------cCCccEeeEEEecC---CCcEEEEE
Q 014454 177 HSTEGYGLSWSKFKEGHLLSGSDD-AQICLWDINAAPKNKSLEAMQIFK------VHEGVVEDVAWHLR---HEYLFGSV 246 (424)
Q Consensus 177 h~~~v~~l~~~~~~~~~l~s~~~d-g~i~iwd~~~~~~~~~~~~~~~~~------~~~~~v~~~~~~~~---~~~~~~s~ 246 (424)
.-...++|+|.|++. +++ +... +.|++++...+.. ..+..+. .....+..|+|+|+ +..++++-
T Consensus 25 ~l~~P~~~a~~pdG~-l~V-~e~~gg~I~~~~~~~g~~----~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~ 98 (454)
T 1cru_A 25 NLNKPHALLWGPDNQ-IWL-TERATGKILRVNPESGSV----KTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISG 98 (454)
T ss_dssp CCSSEEEEEECTTSC-EEE-EETTTCEEEEECTTTCCE----EEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEE
T ss_pred CCCCceEEEEcCCCc-EEE-EEcCCCEEEEEECCCCcE----eEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEE
Confidence 344678999999886 454 4555 4788887644321 1111111 12456789999996 66676665
Q ss_pred eC------------CCeEEEEEcCCCCC----CCCeee-ee-ccCCCeeEEEecCCCCeEEEEE
Q 014454 247 GD------------DQYLLIWDLRTPSV----SKPVQS-VV-AHQSEVNCLAFNPFNEWILATG 292 (424)
Q Consensus 247 ~~------------dg~i~i~d~~~~~~----~~~~~~-~~-~~~~~v~~v~~~~~~~~~l~tg 292 (424)
+. ...|.-++...... .+.+.. +. ........|+|.|+|..++++|
T Consensus 99 s~~~~~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~Lyv~~G 162 (454)
T 1cru_A 99 TFKNPKSTDKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQKIYYTIG 162 (454)
T ss_dssp EEECTTC--CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSCEEEEEC
T ss_pred eccccCCCccccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCeEEEEEC
Confidence 43 23455565543210 011111 11 1123578999999997444444
No 326
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=95.60 E-value=0.37 Score=41.96 Aligned_cols=189 Identities=13% Similarity=0.112 Sum_probs=86.1
Q ss_pred cEEEEEeCC-----CeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCceeEEEecCCCCceEEEEeCC-----CcEEEEeC
Q 014454 139 FLIATKTVS-----AEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDD-----AQICLWDI 208 (424)
Q Consensus 139 ~~latg~~d-----g~v~iw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~d-----g~i~iwd~ 208 (424)
.+++.|+.+ ..+.+||..+.... .+.....+.........+.. ++. +++.|+.+ ..+.+||+
T Consensus 64 ~l~v~GG~~~~~~~~~~~~~d~~~~~~~-----~W~~~~~~p~~r~~~~~~~~--~~~-lyv~GG~~~~~~~~~~~~~d~ 135 (301)
T 2vpj_A 64 RIYVIGGYDGRSRLSSVECLDYTADEDG-----VWYSVAPMNVRRGLAGATTL--GDM-IYVSGGFDGSRRHTSMERYDP 135 (301)
T ss_dssp EEEEECCBCSSCBCCCEEEEETTCCTTC-----CCEEECCCSSCCBSCEEEEE--TTE-EEEECCBCSSCBCCEEEEEET
T ss_pred EEEEEcCCCCCccCceEEEEECCCCCCC-----eeEECCCCCCCccceeEEEE--CCE-EEEEcccCCCcccceEEEEcC
Confidence 477777754 46889998762100 02111111111111112222 233 56666643 35788888
Q ss_pred CCCCCCCcccceeeeecCCccEeeEEEecCCCcEEEEEeCC-----CeEEEEEcCCCCCCCCeeeeeccCCCeeEEEecC
Q 014454 209 NAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDD-----QYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNP 283 (424)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~d-----g~i~i~d~~~~~~~~~~~~~~~~~~~v~~v~~~~ 283 (424)
.+.. ...+..+....... +++.. + ..+++.|+.+ ..+.+||+.+..- ..+..+........++.+
T Consensus 136 ~~~~----W~~~~~~p~~r~~~-~~~~~-~-~~iyv~GG~~~~~~~~~~~~~d~~~~~W-~~~~~~p~~r~~~~~~~~-- 205 (301)
T 2vpj_A 136 NIDQ----WSMLGDMQTAREGA-GLVVA-S-GVIYCLGGYDGLNILNSVEKYDPHTGHW-TNVTPMATKRSGAGVALL-- 205 (301)
T ss_dssp TTTE----EEEEEECSSCCBSC-EEEEE-T-TEEEEECCBCSSCBCCCEEEEETTTTEE-EEECCCSSCCBSCEEEEE--
T ss_pred CCCe----EEECCCCCCCcccc-eEEEE-C-CEEEEECCCCCCcccceEEEEeCCCCcE-EeCCCCCcccccceEEEE--
Confidence 6542 12222221111111 12222 3 4577777654 4588999877541 111111111111222333
Q ss_pred CCCeEEEEEeCC-----CcEEEEECCCCC-CcceEecCCCCCEEEEEEcCCCCcEEEEEECC-----CeEEEeeCCC
Q 014454 284 FNEWILATGSTD-----KTVKLFDLRKIS-TALHTFDSHKEEVFQVGWNPKNETILASCCLG-----RRLMVWDLSR 349 (424)
Q Consensus 284 ~~~~~l~tg~~d-----g~i~iwd~~~~~-~~~~~~~~h~~~v~~~~~sp~~~~~l~s~~~d-----g~i~iwd~~~ 349 (424)
+..+++.|+.+ ..+.+||+.+.. ..+..+.........+.+ ++ .+++.|+.+ ..+.+||+.+
T Consensus 206 -~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~-~i~v~GG~~~~~~~~~v~~yd~~~ 278 (301)
T 2vpj_A 206 -NDHIYVVGGFDGTAHLSSVEAYNIRTDSWTTVTSMTTPRCYVGATVL--RG-RLYAIAGYDGNSLLSSIECYDPII 278 (301)
T ss_dssp -TTEEEEECCBCSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TT-EEEEECCBCSSSBEEEEEEEETTT
T ss_pred -CCEEEEEeCCCCCcccceEEEEeCCCCcEEECCCCCCcccceeEEEE--CC-EEEEEcCcCCCcccccEEEEcCCC
Confidence 33578888764 468999987621 111111111111222222 34 467777655 3467777765
No 327
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=95.52 E-value=0.36 Score=42.04 Aligned_cols=144 Identities=12% Similarity=0.130 Sum_probs=66.7
Q ss_pred eEEEEeCCC-----cEEEEeCCCCCCCCcccceeeeecCCccEeeEEEecCCCcEEEEEeCC-------CeEEEEEcCCC
Q 014454 193 HLLSGSDDA-----QICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDD-------QYLLIWDLRTP 260 (424)
Q Consensus 193 ~l~s~~~dg-----~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~d-------g~i~i~d~~~~ 260 (424)
+++.|+.++ .+.+||+.+.. ...+..+....... +++.. +..+++.|+.+ ..+.+||+.+.
T Consensus 111 iyv~GG~~~~~~~~~~~~~d~~~~~----W~~~~~~p~~r~~~-~~~~~--~~~iyv~GG~~~~~~~~~~~~~~yd~~~~ 183 (302)
T 2xn4_A 111 LYAVGGFDGSTGLSSVEAYNIKSNE----WFHVAPMNTRRSSV-GVGVV--GGLLYAVGGYDVASRQCLSTVECYNATTN 183 (302)
T ss_dssp EEEEEEECSSCEEEEEEEEETTTTE----EEEECCCSSCCBSC-EEEEE--TTEEEEECCEETTTTEECCCEEEEETTTT
T ss_pred EEEEcCCCCCccCceEEEEeCCCCe----EeecCCCCCcccCc-eEEEE--CCEEEEEeCCCCCCCccccEEEEEeCCCC
Confidence 666666543 47788876542 11111111111111 22222 33566676542 35889998775
Q ss_pred CCCCCeeeeeccCCCeeEEEecCCCCeEEEEEeCC-----CcEEEEECCCCC-CcceEecCCCCCEEEEEEcCCCCcEEE
Q 014454 261 SVSKPVQSVVAHQSEVNCLAFNPFNEWILATGSTD-----KTVKLFDLRKIS-TALHTFDSHKEEVFQVGWNPKNETILA 334 (424)
Q Consensus 261 ~~~~~~~~~~~~~~~v~~v~~~~~~~~~l~tg~~d-----g~i~iwd~~~~~-~~~~~~~~h~~~v~~~~~sp~~~~~l~ 334 (424)
.- ..+..+........++.+ +..+++.|+.+ ..+.+||+.+.. ..+..+......-..+.+ ++ .+++
T Consensus 184 ~W-~~~~~~p~~r~~~~~~~~---~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~--~~-~i~v 256 (302)
T 2xn4_A 184 EW-TYIAEMSTRRSGAGVGVL---NNLLYAVGGHDGPLVRKSVEVYDPTTNAWRQVADMNMCRRNAGVCAV--NG-LLYV 256 (302)
T ss_dssp EE-EEECCCSSCCBSCEEEEE---TTEEEEECCBSSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TT-EEEE
T ss_pred cE-EECCCCccccccccEEEE---CCEEEEECCCCCCcccceEEEEeCCCCCEeeCCCCCCccccCeEEEE--CC-EEEE
Confidence 41 111111111111222333 23478888764 368899987621 111111111111122222 34 4677
Q ss_pred EEECCC-----eEEEeeCCCC
Q 014454 335 SCCLGR-----RLMVWDLSRI 350 (424)
Q Consensus 335 s~~~dg-----~i~iwd~~~~ 350 (424)
.|+.++ .+.+||+.+.
T Consensus 257 ~GG~~~~~~~~~v~~yd~~~~ 277 (302)
T 2xn4_A 257 VGGDDGSCNLASVEYYNPTTD 277 (302)
T ss_dssp ECCBCSSSBCCCEEEEETTTT
T ss_pred ECCcCCCcccccEEEEcCCCC
Confidence 776553 3778887653
No 328
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=95.38 E-value=1.7 Score=40.38 Aligned_cols=112 Identities=7% Similarity=0.108 Sum_probs=57.3
Q ss_pred CCceeEEEecCCCCcEEEEEeCCCeEEEEeCCCCCCCCCCCCCCCCcEEEec------CCCceeEEEecCC---CCceEE
Q 014454 125 DGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRG------HSTEGYGLSWSKF---KEGHLL 195 (424)
Q Consensus 125 ~~~v~~~~~~p~~~~~latg~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~------h~~~v~~l~~~~~---~~~~l~ 195 (424)
-.....|+|.|++. ++++-...+.|++++... +....+..+.. .......|+|+|+ +. .|+
T Consensus 26 l~~P~~~a~~pdG~-l~V~e~~gg~I~~~~~~~--------g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g-~lY 95 (454)
T 1cru_A 26 LNKPHALLWGPDNQ-IWLTERATGKILRVNPES--------GSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNP-YIY 95 (454)
T ss_dssp CSSEEEEEECTTSC-EEEEETTTCEEEEECTTT--------CCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSC-EEE
T ss_pred CCCceEEEEcCCCc-EEEEEcCCCEEEEEECCC--------CcEeEEecCCccccccCCCCceeEEEECCCcCcCC-EEE
Confidence 44667999999996 566533334788887543 11111111111 2345679999995 44 344
Q ss_pred EEeC-------------CCcEEEEeCCCCCC-CCcccc-eeeee-cCCccEeeEEEecCCCcEEEEEe
Q 014454 196 SGSD-------------DAQICLWDINAAPK-NKSLEA-MQIFK-VHEGVVEDVAWHLRHEYLFGSVG 247 (424)
Q Consensus 196 s~~~-------------dg~i~iwd~~~~~~-~~~~~~-~~~~~-~~~~~v~~~~~~~~~~~~~~s~~ 247 (424)
.+.. ...|.-+++..... ....+. +..+. ........|+|.|++. |+++.+
T Consensus 96 v~~s~~~~~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~-Lyv~~G 162 (454)
T 1cru_A 96 ISGTFKNPKSTDKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQK-IYYTIG 162 (454)
T ss_dssp EEEEEECTTC--CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSC-EEEEEC
T ss_pred EEEeccccCCCccccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCe-EEEEEC
Confidence 3332 13455555533211 001111 11111 1123478899999996 554544
No 329
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=95.21 E-value=0.42 Score=41.75 Aligned_cols=187 Identities=7% Similarity=0.052 Sum_probs=87.3
Q ss_pred cEEEEEeCC----CeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCceeEEEecCCCCceEEEEeCC------CcEEEEeC
Q 014454 139 FLIATKTVS----AEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDD------AQICLWDI 208 (424)
Q Consensus 139 ~~latg~~d----g~v~iw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~d------g~i~iwd~ 208 (424)
.+++.|+.+ ..+.+||..+ ..+.....+.........+.+ ++. +++.|+.+ ..+.+||+
T Consensus 57 ~lyv~GG~~~~~~~~~~~~d~~~--------~~W~~~~~~p~~r~~~~~~~~--~~~-iyv~GG~~~~~~~~~~~~~~d~ 125 (306)
T 3ii7_A 57 VVYILGGSQLFPIKRMDCYNVVK--------DSWYSKLGPPTPRDSLAACAA--EGK-IYTSGGSEVGNSALYLFECYDT 125 (306)
T ss_dssp EEEEECCBSSSBCCEEEEEETTT--------TEEEEEECCSSCCBSCEEEEE--TTE-EEEECCBBTTBSCCCCEEEEET
T ss_pred EEEEEeCCCCCCcceEEEEeCCC--------CeEEECCCCCccccceeEEEE--CCE-EEEECCCCCCCcEeeeEEEEeC
Confidence 477777754 6788898876 222221111111111112222 233 66667654 45888888
Q ss_pred CCCCCCCcccceeeeecCCccEeeEEEecCCCcEEEEEeC---------CCeEEEEEcCCCCCCCCeeeeeccCCCeeEE
Q 014454 209 NAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGD---------DQYLLIWDLRTPSVSKPVQSVVAHQSEVNCL 279 (424)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~---------dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~v 279 (424)
.+.. ...+..+....... +++.. + ..+++.|+. -..+.+||+.+..- ..+..+......-.++
T Consensus 126 ~~~~----W~~~~~~p~~r~~~-~~~~~-~-~~iyv~GG~~~~~~~~~~~~~~~~yd~~~~~W-~~~~~~p~~r~~~~~~ 197 (306)
T 3ii7_A 126 RTES----WHTKPSMLTQRCSH-GMVEA-N-GLIYVCGGSLGNNVSGRVLNSCEVYDPATETW-TELCPMIEARKNHGLV 197 (306)
T ss_dssp TTTE----EEEECCCSSCCBSC-EEEEE-T-TEEEEECCEESCTTTCEECCCEEEEETTTTEE-EEECCCSSCCBSCEEE
T ss_pred CCCc----eEeCCCCcCCccee-EEEEE-C-CEEEEECCCCCCCCcccccceEEEeCCCCCeE-EECCCccchhhcceEE
Confidence 7642 11111111111111 12222 3 356666653 34588999887541 1111111111112222
Q ss_pred EecCCCCeEEEEEeCC-----CcEEEEECCCCC-CcceEecCCCCCEEEEEEcCCCCcEEEEEECC-----CeEEEeeCC
Q 014454 280 AFNPFNEWILATGSTD-----KTVKLFDLRKIS-TALHTFDSHKEEVFQVGWNPKNETILASCCLG-----RRLMVWDLS 348 (424)
Q Consensus 280 ~~~~~~~~~l~tg~~d-----g~i~iwd~~~~~-~~~~~~~~h~~~v~~~~~sp~~~~~l~s~~~d-----g~i~iwd~~ 348 (424)
.+ +..+++.|+.+ ..+.+||+.+.. ..+..+.........+.+ ++ .+++.|+.+ ..+.+||+.
T Consensus 198 ~~---~~~i~v~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~-~i~v~GG~~~~~~~~~~~~yd~~ 271 (306)
T 3ii7_A 198 FV---KDKIFAVGGQNGLGGLDNVEYYDIKLNEWKMVSPMPWKGVTVKCAAV--GS-IVYVLAGFQGVGRLGHILEYNTE 271 (306)
T ss_dssp EE---TTEEEEECCEETTEEBCCEEEEETTTTEEEECCCCSCCBSCCEEEEE--TT-EEEEEECBCSSSBCCEEEEEETT
T ss_pred EE---CCEEEEEeCCCCCCCCceEEEeeCCCCcEEECCCCCCCccceeEEEE--CC-EEEEEeCcCCCeeeeeEEEEcCC
Confidence 23 33477777754 368899987621 111111111222233333 33 577777754 457788876
Q ss_pred CC
Q 014454 349 RI 350 (424)
Q Consensus 349 ~~ 350 (424)
..
T Consensus 272 ~~ 273 (306)
T 3ii7_A 272 TD 273 (306)
T ss_dssp TT
T ss_pred CC
Confidence 63
No 330
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=94.80 E-value=1.9 Score=37.80 Aligned_cols=205 Identities=14% Similarity=0.143 Sum_probs=121.2
Q ss_pred ccCCceeEEEecCCCCcEEEEEeCCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCC----CceeEEEecCCCCceEEEEe
Q 014454 123 NHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHS----TEGYGLSWSKFKEGHLLSGS 198 (424)
Q Consensus 123 ~h~~~v~~~~~~p~~~~~latg~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~h~----~~v~~l~~~~~~~~~l~s~~ 198 (424)
..+.+|.-=+|-.... |+--+ +..|+-|++.. ...|...+..|. ..|..-.-+++.+.++++|-
T Consensus 104 ~~~e~VvfWkWis~~~--L~lVT-~taVyHWs~~~---------~s~P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI 171 (365)
T 2xzh_A 104 TMTDDVTFWKWISLNT--VALVT-DNAVYHWSMEG---------ESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGI 171 (365)
T ss_dssp ECSSCEEEEEECSSSE--EEEEE-SSEEEEEESST---------TCCCEEEEECCGGGTTCEEEEEEECTTSCEEEEEEE
T ss_pred ecCCccEEEEecCCCe--EEEEc-CCcEEEEcccC---------CCCCceeeecchhcccceEEEEEECCCCCEEEEEeE
Confidence 3456777677766554 33333 45899999875 134455555443 46777777887775455543
Q ss_pred ------CCCcEEEEeCCCCCCCCcccceeeeecCCccEeeEEEec--CCCcEEEEEeC---CCeEEEEEcCCCC-CCCCe
Q 014454 199 ------DDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHL--RHEYLFGSVGD---DQYLLIWDLRTPS-VSKPV 266 (424)
Q Consensus 199 ------~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~~~~~~s~~~---dg~i~i~d~~~~~-~~~~~ 266 (424)
-.|.+.+|.++.. ..+.+.+|......+.... ....+|+-+.. .+.++|.++..+. ...+.
T Consensus 172 ~~~~~~v~G~mQLYS~er~-------~sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhIiEi~~~~~~~~~f 244 (365)
T 2xzh_A 172 SAQQNRVVGAMQLYSVDRK-------VSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPF 244 (365)
T ss_dssp EEETTEEEEEEEEEETTTT-------EEEEECCSEEEEEEECCTTCSSCEEEEEEEEEETTEEEEEEEECSSCCTTCCCC
T ss_pred eccCCccceeEEEEeeccc-------ccceeeeeeeeeEEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCCCCCCCc
Confidence 2477889998754 3455667765554443321 12235544433 2689999996541 11111
Q ss_pred e----e-e---eccCCCeeEEEecCCCCeEEEEEeCCCcEEEEECCCCCCcceEecCCCCCEEEEEEcCCCCcEEEEEEC
Q 014454 267 Q----S-V---VAHQSEVNCLAFNPFNEWILATGSTDKTVKLFDLRKISTALHTFDSHKEEVFQVGWNPKNETILASCCL 338 (424)
Q Consensus 267 ~----~-~---~~~~~~v~~v~~~~~~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~l~s~~~ 338 (424)
. . + .+..+-..++..++.-. ++..-+.-|.|++||+.+ +.++..-+-....|...+-+..... +++...
T Consensus 245 ~kk~vdi~fppea~~DFPVamqvs~kyg-viyviTK~G~ihlyDleT-gt~i~~nrIS~d~iF~ta~~~~~~G-i~~Vnr 321 (365)
T 2xzh_A 245 PKKAVDVFFPPEAQNDFPVAMQISEKHD-VVFLITKYGYIHLYDLET-GTCIYMNRISGETIFVTAPHEATAG-IIGVNR 321 (365)
T ss_dssp CCEEEEECCCTTCTTCCEEEEEEETTTT-EEEEEETTSEEEEEETTT-CCEEEEEECCSSCEEEEEEEGGGTE-EEEEET
T ss_pred ccccceeeCCccccCCceEEEEecccCC-EEEEEeCCcEEEEEEccc-CcEEEEeccCCCceEEecccCCCCc-EEEEcC
Confidence 1 0 1 11234456777777666 677778899999999999 6777776666677766665544333 334446
Q ss_pred CCeEEEeeCCC
Q 014454 339 GRRLMVWDLSR 349 (424)
Q Consensus 339 dg~i~iwd~~~ 349 (424)
.|.|.--.++.
T Consensus 322 ~GqVl~v~v~~ 332 (365)
T 2xzh_A 322 KGQVLSVCVEE 332 (365)
T ss_dssp TCEEEEEEECT
T ss_pred CCEEEEEEECc
Confidence 66665555443
No 331
>1sqj_A OXG-RCBH, oligoxyloglucan reducing-END-specific cellobiohydrolase; beta-propeller; 2.20A {Geotrichum SP} SCOP: b.69.13.1 b.69.13.1 PDB: 2ebs_A*
Probab=94.78 E-value=3.6 Score=41.35 Aligned_cols=159 Identities=11% Similarity=0.074 Sum_probs=78.8
Q ss_pred CCceeEEEecCCCCcEEEEEeCCCeEEEEeCCCCCCCCCCCCCCCCcEEEec----CCCceeEEEecCCCCceEEEEeCC
Q 014454 125 DGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRG----HSTEGYGLSWSKFKEGHLLSGSDD 200 (424)
Q Consensus 125 ~~~v~~~~~~p~~~~~latg~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~----h~~~v~~l~~~~~~~~~l~s~~~d 200 (424)
.+.|.+|+++|.++..+.+++..+.|...+-.. ..+.++..... ....+.+|++.|..+..++.+...
T Consensus 14 ~g~i~~i~~~p~~~~~~~a~~~~ggv~rS~DgG--------~tW~~~~~~~~~~~~~~~~i~~ia~dp~~~~~i~~~~g~ 85 (789)
T 1sqj_A 14 GGYITGIVAHPKTKDLLYARTDIGGAYRWDAGT--------SKWIPLNDFIEAQDMNIMGTESIALDPNNPDRLYLAQGR 85 (789)
T ss_dssp CSCEEEEEECSSSTTCEEEEESSSCEEEEETTT--------TEEEESCTTCCGGGGGGCSEEEEEEETTEEEEEEEEECS
T ss_pred CCcEEEEEECCCCCCEEEEEecCCCEEEecCCC--------CCeeECccCCCcccccCCceeEEEECCCCCCEEEEEeCc
Confidence 468999999998766777777777766555322 11221110000 124689999998655455555432
Q ss_pred Cc----EEEEeCCCCCCCCcccceee-ee--c---CCccEeeEEEecCCCcEEEEEeCCCeEEEEEc-CCCCCCCCeeee
Q 014454 201 AQ----ICLWDINAAPKNKSLEAMQI-FK--V---HEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDL-RTPSVSKPVQSV 269 (424)
Q Consensus 201 g~----i~iwd~~~~~~~~~~~~~~~-~~--~---~~~~v~~~~~~~~~~~~~~s~~~dg~i~i~d~-~~~~~~~~~~~~ 269 (424)
.. -.||.-..+. .+.+.+.. +. . ....+..++++|.....+..+...+.| |-. ..++..+.+...
T Consensus 86 ~~~~~~~~v~~S~DgG--~TW~~~~~~~~~~~~~~~~~~~~~iav~p~~~~~v~~g~~~~gl--~~S~DgG~TW~~~~~~ 161 (789)
T 1sqj_A 86 YVGDEWAAFYVSEDRG--QSFTIYESPFPMGANDMGRNNGERLAVNPFNSNEVWMGTRTEGI--WKSSDRAKTWTNVTSI 161 (789)
T ss_dssp CTTSSCCEEEEESSTT--SEEEEEECSSCCCTTSTTTTSCCCEEEETTEEEEEEEECSSSCE--EEESSTTSSCEEETTS
T ss_pred cCCCcccEEEEECCCC--CcceeccCCcccCccCCCccceeEEEEcCCCCCEEEEEeccCCE--EEECCCCcccCCCccC
Confidence 11 3344333322 22222211 00 0 011356788888665555555534433 333 233322211111
Q ss_pred e---ccCCCeeEEEecCCCCeEEEEEeCC
Q 014454 270 V---AHQSEVNCLAFNPFNEWILATGSTD 295 (424)
Q Consensus 270 ~---~~~~~v~~v~~~~~~~~~l~tg~~d 295 (424)
. .....+..|.++|.....++++..+
T Consensus 162 ~~~~~~~~~~~~i~~~p~~~~~~~~~~~~ 190 (789)
T 1sqj_A 162 PDAFTNGIGYTSVIFDPERNGTIYASATA 190 (789)
T ss_dssp CCCCSTTTCEEEEEECTTSTTCEEEEESS
T ss_pred ccccCCCCCeEEEEECCCCCCEEEEEEcC
Confidence 0 1124578899988654345555544
No 332
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=94.61 E-value=0.78 Score=40.99 Aligned_cols=30 Identities=7% Similarity=-0.074 Sum_probs=16.7
Q ss_pred CCCcEEEEEeCCC------cEEEEecCCccCCCCCCC
Q 014454 385 CEDWVISSVAEDN------ILQIWQMAENIYHDEDDL 415 (424)
Q Consensus 385 ~~~~~l~s~~~dg------~i~vw~~~~~~~~~~~~~ 415 (424)
+++ +++.||.++ .|.+.++.++.+.+....
T Consensus 316 ~~~-i~v~GG~~~~~~~~~~v~~l~~~~~~~~~~~~~ 351 (357)
T 2uvk_A 316 NNS-LLIIGGETAGGKAVTDSVLITVKDNKVTVQNLE 351 (357)
T ss_dssp TTE-EEEEEEECGGGCEEEEEEEEEC-CCSCEEEC--
T ss_pred CCE-EEEEeeeCCCCCEeeeEEEEEEcCcEeEeeecc
Confidence 455 777777543 355568887776554443
No 333
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=94.53 E-value=2.8 Score=38.41 Aligned_cols=205 Identities=15% Similarity=0.149 Sum_probs=125.7
Q ss_pred ccCCceeEEEecCCCCcEEEEEeCCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCC----CceeEEEecCCCCceEEEEe
Q 014454 123 NHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHS----TEGYGLSWSKFKEGHLLSGS 198 (424)
Q Consensus 123 ~h~~~v~~~~~~p~~~~~latg~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~h~----~~v~~l~~~~~~~~~l~s~~ 198 (424)
..+.+|.-=+|-.... |+--+ +..|+-|++.. ...|...+..|. ..|..-.-+++.+.++++|-
T Consensus 103 ~~~e~VvfWkWis~~~--l~lVT-~taVyHWsi~~---------~s~P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI 170 (494)
T 1bpo_A 103 TMTDDVTFWKWISLNT--VALVT-DNAVYHWSMEG---------ESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGI 170 (494)
T ss_dssp ECSSCCCEEEEEETTE--EEEEC-SSEEEEEESSS---------SCCCEEEEECCGGGTTCEEEEEEECTTSSEEEEEEE
T ss_pred ecCCCceEEEecCCCe--EEEEc-CCeeEEecccC---------CCCchhheecchhcccceEEEEEECCCCCeEEEEee
Confidence 3455666666765443 44333 46899999975 134555555443 46777777887775455443
Q ss_pred ------CCCcEEEEeCCCCCCCCcccceeeeecCCccEeeEEEecC--CCcEEEEEeCC---CeEEEEEcCCCC-CCCCe
Q 014454 199 ------DDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLR--HEYLFGSVGDD---QYLLIWDLRTPS-VSKPV 266 (424)
Q Consensus 199 ------~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~~~~s~~~d---g~i~i~d~~~~~-~~~~~ 266 (424)
-.|.+.+|.++.. ..+.+.+|......+..... ...+|+-+... +.++|.++..+. ...+.
T Consensus 171 ~~~~~~v~G~mQLYS~er~-------~sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhi~Ei~~~~~~~~~f 243 (494)
T 1bpo_A 171 SAQQNRVVGAMQLYSVDRK-------VSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPF 243 (494)
T ss_dssp EEETTEEEEEEEEEESTTC-------CEEEECCSEEEEEEEECTTCSSEEEEEEEEECSTTCCEEEEEECSCCCTTCCCC
T ss_pred cccCCcccceEEEeecccc-------ccchheeeeeeeEEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCccCCCCc
Confidence 2478899998764 34556777666555544321 12356555443 789999996541 11111
Q ss_pred e--ee------eccCCCeeEEEecCCCCeEEEEEeCCCcEEEEECCCCCCcceEecCCCCCEEEEEEcCCCCcEEEEEEC
Q 014454 267 Q--SV------VAHQSEVNCLAFNPFNEWILATGSTDKTVKLFDLRKISTALHTFDSHKEEVFQVGWNPKNETILASCCL 338 (424)
Q Consensus 267 ~--~~------~~~~~~v~~v~~~~~~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~l~s~~~ 338 (424)
. .. ....+-..++..++.-. ++..-+.-|.|++||+.+ +.++..-+-....|...+-+..... +++...
T Consensus 244 ~kk~vdv~fppe~~~DFPvamqvs~kyg-viyviTK~G~i~lyDleT-gt~i~~nrIs~~~iF~t~~~~~~~G-i~~Vnr 320 (494)
T 1bpo_A 244 PKKAVDVFFPPEAQNDFPVAMQISEKHD-VVFLITKYGYIHLYDLET-GTCIYMNRISGETIFVTAPHEATAG-IIGVNR 320 (494)
T ss_dssp CCEEEECCCCTTSTTCCEEEEEEETTTT-EEEEEETTSEEEEEETTT-CCEEEEEECCSSCEEEEEEETTTTE-EEEEET
T ss_pred cceeeeeeCCcccccCceeEEEecccCC-EEEEEecCceEEEEeccc-ceeeeeecccCCceEEecccCCCCc-EEEEcc
Confidence 1 10 11234456777777666 677778899999999999 6777776666777777666655444 444457
Q ss_pred CCeEEEeeCCC
Q 014454 339 GRRLMVWDLSR 349 (424)
Q Consensus 339 dg~i~iwd~~~ 349 (424)
.|.|.--.++.
T Consensus 321 ~GqVl~v~v~e 331 (494)
T 1bpo_A 321 KGQVLSVCVEE 331 (494)
T ss_dssp TCEEEEEEECT
T ss_pred CceEEEEEEcc
Confidence 77666555543
No 334
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=94.40 E-value=0.52 Score=41.20 Aligned_cols=103 Identities=13% Similarity=0.148 Sum_probs=50.0
Q ss_pred CcEEEEEeCC-----CeEEEEEcCCCCCCCCeeeeeccCCCeeEEEecCCCCeEEEEEeCC-----CcEEEEECCCCC-C
Q 014454 240 EYLFGSVGDD-----QYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATGSTD-----KTVKLFDLRKIS-T 308 (424)
Q Consensus 240 ~~~~~s~~~d-----g~i~i~d~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~l~tg~~d-----g~i~iwd~~~~~-~ 308 (424)
..+++.|+.+ ..+.+||+.+..- ..+..+........++.+ +..+++.|+.+ ..+.+||+.+.. .
T Consensus 169 ~~iyv~GG~~~~~~~~~~~~yd~~~~~W-~~~~~~p~~r~~~~~~~~---~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~ 244 (308)
T 1zgk_A 169 RLLYAVGGFDGTNRLNSAECYYPERNEW-RMITAMNTIRSGAGVCVL---HNCIYAAGGYDGQDQLNSVERYDVETETWT 244 (308)
T ss_dssp TEEEEECCBCSSCBCCCEEEEETTTTEE-EECCCCSSCCBSCEEEEE---TTEEEEECCBCSSSBCCCEEEEETTTTEEE
T ss_pred CEEEEEeCCCCCCcCceEEEEeCCCCeE-eeCCCCCCccccceEEEE---CCEEEEEeCCCCCCccceEEEEeCCCCcEE
Confidence 4577777654 4588999876541 111111111112223333 33478888764 468999987621 1
Q ss_pred cceEecCCCCCEEEEEEcCCCCcEEEEEECC-----CeEEEeeCCC
Q 014454 309 ALHTFDSHKEEVFQVGWNPKNETILASCCLG-----RRLMVWDLSR 349 (424)
Q Consensus 309 ~~~~~~~h~~~v~~~~~sp~~~~~l~s~~~d-----g~i~iwd~~~ 349 (424)
.+..+.........+.+ ++ .+++.|+.+ ..+.+||+.+
T Consensus 245 ~~~~~p~~r~~~~~~~~--~~-~i~v~GG~~~~~~~~~v~~yd~~~ 287 (308)
T 1zgk_A 245 FVAPMKHRRSALGITVH--QG-RIYVLGGYDGHTFLDSVECYDPDT 287 (308)
T ss_dssp ECCCCSSCCBSCEEEEE--TT-EEEEECCBCSSCBCCEEEEEETTT
T ss_pred ECCCCCCCccceEEEEE--CC-EEEEEcCcCCCcccceEEEEcCCC
Confidence 11111111111122222 33 466676643 3466777655
No 335
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=94.20 E-value=2.5 Score=36.88 Aligned_cols=62 Identities=8% Similarity=0.175 Sum_probs=33.6
Q ss_pred CcEEEEEeC------CCeEEEEEcCCCCCCCCeeeeeccCCCeeEEEecCCCCeEEEEEeCCC-----cEEEEECCC
Q 014454 240 EYLFGSVGD------DQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATGSTDK-----TVKLFDLRK 305 (424)
Q Consensus 240 ~~~~~s~~~------dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~l~tg~~dg-----~i~iwd~~~ 305 (424)
..+++.|+. -..+.+||+.+..- ..+..+......-.++.+ ++ .+++.|+.++ .+.+||+.+
T Consensus 149 ~~iyv~GG~~~~~~~~~~~~~yd~~~~~W-~~~~~~p~~r~~~~~~~~--~~-~iyv~GG~~~~~~~~~~~~yd~~~ 221 (315)
T 4asc_A 149 DLVYVIGGKGSDRKCLNKMCVYDPKKFEW-KELAPMQTARSLFGATVH--DG-RIIVAAGVTDTGLTSSAEVYSITD 221 (315)
T ss_dssp TEEEEECCBCTTSCBCCCEEEEETTTTEE-EECCCCSSCCBSCEEEEE--TT-EEEEEEEECSSSEEEEEEEEETTT
T ss_pred CEEEEEeCCCCCCcccceEEEEeCCCCeE-EECCCCCCchhceEEEEE--CC-EEEEEeccCCCCccceEEEEECCC
Confidence 357777775 24688999887541 111111111111222333 23 4788887654 588899876
No 336
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=93.36 E-value=4.4 Score=36.64 Aligned_cols=158 Identities=8% Similarity=-0.037 Sum_probs=71.6
Q ss_pred CceeEEEecCCCCceEEEEeCCCcEEEEeCCCCCCCCcccceee-eec---------CCccEeeEEEecCCCcEEEEEeC
Q 014454 179 TEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQI-FKV---------HEGVVEDVAWHLRHEYLFGSVGD 248 (424)
Q Consensus 179 ~~v~~l~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~-~~~---------~~~~v~~~~~~~~~~~~~~s~~~ 248 (424)
..+.+|.+.|..+..|+.+..++.|... ..+.. ++..+.. ... ....+.+|.++|.+...+.++..
T Consensus 177 ~~i~~i~~d~~~~~~l~vg~~~ggl~~s--~DgG~--tW~~~~~~~~~~~~p~~~~~~g~~~~~i~~~~~~~~~l~vg~~ 252 (394)
T 3b7f_A 177 PKMHSILVDPRDPKHLYIGMSSGGVFES--TDAGT--DWKPLNRGCAANFLPDPNVEFGHDPHCVVQHPAAPDILYQQNH 252 (394)
T ss_dssp CEEEEEEECTTCTTCEEEEEETBEEEEE--SSTTS--SCEECCTTCCCTTSSSSSSSSCBCEEEEEECSSSTTEEEEEET
T ss_pred CceeEEEECCCCCCEEEEEECCCCEEEE--CCCCC--CceECCCCccccccCCCccccCcceeEEEECCCCCCEEEEEcC
Confidence 3578899988544446656544444333 22211 1111110 000 01358899999875444445554
Q ss_pred CCeEEEEEcCCCCCCCCeeeeeccC---CCeeEEEecCCCCeEEEEEeC-----------CCcEEEEECCCCCCcceEec
Q 014454 249 DQYLLIWDLRTPSVSKPVQSVVAHQ---SEVNCLAFNPFNEWILATGST-----------DKTVKLFDLRKISTALHTFD 314 (424)
Q Consensus 249 dg~i~i~d~~~~~~~~~~~~~~~~~---~~v~~v~~~~~~~~~l~tg~~-----------dg~i~iwd~~~~~~~~~~~~ 314 (424)
.+ |...+-. +.....+.. .... ..+.+++++|.....|.++.. ++...+|.....+.....+.
T Consensus 253 ~g-l~~s~D~-G~tW~~~~~-~l~~~~~~~~~~i~~~p~~~~~l~~~t~~~~~~w~~~~~~~~~~~~~S~DgG~tW~~~~ 329 (394)
T 3b7f_A 253 CG-IYRMDRR-EGVWKRIGD-AMPREVGDIGFPIVVHQRDPRTVWVFPMDGSDVWPRVSPGGKPAVYVTRDAGESWQRQD 329 (394)
T ss_dssp TE-EEEEETT-TTEEECGGG-GSCTTTCSCEEEEEECSSCTTCEEEEECBCCSSTTCCBCCSSCCEEEESSTTSCCEEEC
T ss_pred Ce-EEEeCCC-CCcceECCC-CCCCCCccceEEEEECCCCCCEEEEEeccCCccceeecCCCceeEEEECCCCCCceECC
Confidence 44 4443322 221111111 0011 345678888743323444432 33355665554334333332
Q ss_pred C--CC-C-----CEEEEEEcCCCCcEEEEEECCCeEE
Q 014454 315 S--HK-E-----EVFQVGWNPKNETILASCCLGRRLM 343 (424)
Q Consensus 315 ~--h~-~-----~v~~~~~sp~~~~~l~s~~~dg~i~ 343 (424)
. .. . ....++++|..+..|+.++.++.|.
T Consensus 330 ~glp~~~~~~~~~~~~~~~~p~~~~~l~~g~~~g~l~ 366 (394)
T 3b7f_A 330 RGLPTDQAWLTVKRQAMTADAHAPVGVYFGTTGGEIW 366 (394)
T ss_dssp BTSCCSSCCCCCCTBSEEECCSSSCCEEEECTTSCEE
T ss_pred CCCCCccccceEEEEEEEECCCCCCEEEEEeCCCeEE
Confidence 1 11 0 1135888886433355565555444
No 337
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=93.13 E-value=4.1 Score=35.53 Aligned_cols=62 Identities=16% Similarity=0.268 Sum_probs=32.2
Q ss_pred CcEEEEEeC------CCeEEEEEcCCCCCCCCeeeeeccCCCeeEEEecCCCCeEEEEEeCC-----CcEEEEECCC
Q 014454 240 EYLFGSVGD------DQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATGSTD-----KTVKLFDLRK 305 (424)
Q Consensus 240 ~~~~~s~~~------dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~l~tg~~d-----g~i~iwd~~~ 305 (424)
..+++.|+. -..+.+||+.+..- ..+..+........++.+ ++ .+++.|+.+ ..+.+||+.+
T Consensus 159 ~~iyv~GG~~~~~~~~~~~~~yd~~~~~W-~~~~~~p~~r~~~~~~~~--~~-~iyv~GG~~~~~~~~~~~~yd~~~ 231 (318)
T 2woz_A 159 GMIYCLGGKTDDKKCTNRVFIYNPKKGDW-KDLAPMKTPRSMFGVAIH--KG-KIVIAGGVTEDGLSASVEAFDLKT 231 (318)
T ss_dssp TEEEEECCEESSSCBCCCEEEEETTTTEE-EEECCCSSCCBSCEEEEE--TT-EEEEEEEEETTEEEEEEEEEETTT
T ss_pred CEEEEEcCCCCCCCccceEEEEcCCCCEE-EECCCCCCCcccceEEEE--CC-EEEEEcCcCCCCccceEEEEECCC
Confidence 356667663 24588999987541 111111111111222333 23 477777754 3577889876
No 338
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=92.90 E-value=4.8 Score=35.78 Aligned_cols=157 Identities=17% Similarity=0.191 Sum_probs=82.6
Q ss_pred EecCCCceeEEEecCCCCceEEEEeCCCcEEEEeCCCCCCCCcccce-eeeecCCccEeeEEEecC---CCcEEEEEe--
Q 014454 174 LRGHSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAM-QIFKVHEGVVEDVAWHLR---HEYLFGSVG-- 247 (424)
Q Consensus 174 ~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~-~~~~~~~~~v~~~~~~~~---~~~~~~s~~-- 247 (424)
+...-...+.|+|.|++. ++++--..|.|++++...+.. ..+..+ ..+.........|+++|+ +..++++-+
T Consensus 27 va~gL~~P~~ia~~pdG~-llVter~~G~I~~v~~~~g~~-~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~ 104 (347)
T 3das_A 27 VATGLNSPWGLAPLPGGD-LLVSSRDEATITRVDAKTGRK-TELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTSA 104 (347)
T ss_dssp EECCCSSEEEEEECTTSC-EEEEETTTCEEEEECTTTCCE-EEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEECS
T ss_pred eecCCCCceEEEEcCCCc-EEEEEecCCEEEEEECCCCcE-eeecccCceeecCCCCceeeEeccccccCCEEEEEEecC
Confidence 333445678999999886 555544489999998654321 111000 111223567899999995 455655432
Q ss_pred CCCeEEEEEcCCCC----CC-CC--ee-eee-ccCCCeeEEEecCCCCeEEEEEeC-------------CCcEEEEECCC
Q 014454 248 DDQYLLIWDLRTPS----VS-KP--VQ-SVV-AHQSEVNCLAFNPFNEWILATGST-------------DKTVKLFDLRK 305 (424)
Q Consensus 248 ~dg~i~i~d~~~~~----~~-~~--~~-~~~-~~~~~v~~v~~~~~~~~~l~tg~~-------------dg~i~iwd~~~ 305 (424)
.++.|.-|.+.... .. .. +. .+. ........|+|.|+|. |+++.+. .|.|.-++...
T Consensus 105 ~~~~v~R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG~-Lyvt~Gd~~~~~~~qd~~~~~G~IlRi~~dG 183 (347)
T 3das_A 105 SDNRIVRMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDKM-LYAGTGESGDTGLSQDRKSLGGKILRMTPDG 183 (347)
T ss_dssp SSEEEEEEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTSC-EEEECBCTTCGGGTTCTTCSTTCEEEECTTS
T ss_pred CCCEEEEEEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCCCC-EEEEECCCCCCccccCCCCCCCEEEEEeCCC
Confidence 34556666665421 11 11 11 111 1122456799999997 5555332 24554445432
Q ss_pred C---CCc---ceEe-cCCCCCEEEEEEcCCCCcEEEE
Q 014454 306 I---STA---LHTF-DSHKEEVFQVGWNPKNETILAS 335 (424)
Q Consensus 306 ~---~~~---~~~~-~~h~~~v~~~~~sp~~~~~l~s 335 (424)
. ..+ ...+ .+|. ....++|+|++. ++++
T Consensus 184 ~ip~~nPf~~~~i~a~G~R-Np~Gla~dp~G~-L~~~ 218 (347)
T 3das_A 184 EPAPGNPFPGSPVYSYGHR-NVQGLAWDDKQR-LFAS 218 (347)
T ss_dssp SBCTTCSSTTCCEEEBCCS-BCCEEEECTTCC-EEEE
T ss_pred CccCCCCCCCCeEEeeCCC-CcceEEECCCCC-EEEE
Confidence 1 000 1112 2333 356899999875 4433
No 339
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=92.70 E-value=3.6 Score=33.84 Aligned_cols=114 Identities=9% Similarity=-0.004 Sum_probs=60.4
Q ss_pred CceeEEEecCCCCcEEEEEeCCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCC--CceeEEEecCCCCceEEEEeCCCcE
Q 014454 126 GEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHS--TEGYGLSWSKFKEGHLLSGSDDAQI 203 (424)
Q Consensus 126 ~~v~~~~~~p~~~~~latg~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~h~--~~v~~l~~~~~~~~~l~s~~~dg~i 203 (424)
..+..++|+|++. +.|+ .+|.++-.+..+.... .+....+..+.. ..-.++.|.|++. |..+ .||.|
T Consensus 41 ~~~~~laf~P~G~-LYaV--~~G~Ly~~~~~t~~~~-----~W~~s~t~IG~~Gw~~F~a~~fD~~G~--LYav-~dG~i 109 (236)
T 1tl2_A 41 SNFKFLFLSPGGE-LYGV--LNDKIYKGTPPTHDND-----NWMGRAKKIGNGGWNQFQFLFFDPNGY--LYAV-SKDKL 109 (236)
T ss_dssp TTCSEEEECTTSC-EEEE--ETTEEEEESCCCSTTC-----CHHHHCEEEECSCGGGCSEEEECTTSC--EEEE-ETTEE
T ss_pred ccceeEEECCCcc-EEEE--eCCeEEEECCCCCCcc-----cccccccEecccccccceEEEECCCCC--EEEe-CCCEE
Confidence 3677999999776 6666 6777555554321000 000011111110 0136788888776 4444 56988
Q ss_pred EEEeCCCCCCCCcccceeee-ecCCccEeeEEEecCCCcEEEEEeCCCeEE
Q 014454 204 CLWDINAAPKNKSLEAMQIF-KVHEGVVEDVAWHLRHEYLFGSVGDDQYLL 253 (424)
Q Consensus 204 ~iwd~~~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~~s~~~dg~i~ 253 (424)
.-++.-+.....-+..-..+ ..-=..+..|.+.|++. |.++. |+.++
T Consensus 110 yr~~pP~~~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~-Lyav~--dg~ly 157 (236)
T 1tl2_A 110 YKASPPQSDTDNWIARATEVGSGGWSGFKFLFFHPNGY-LYAVH--GQQFY 157 (236)
T ss_dssp EEESCCCSTTCCHHHHSEEEECSSGGGEEEEEECTTSC-EEEEE--TTEEE
T ss_pred EEeCCCcCCCCceeccccEeccCCCCceEEEEECCCce-EEEEe--CCcEE
Confidence 87775333222221111111 11125679999999985 66444 78754
No 340
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=92.49 E-value=5.8 Score=35.70 Aligned_cols=157 Identities=7% Similarity=0.076 Sum_probs=82.6
Q ss_pred CccEeeEEEe---cC----CCcEEEEEeCCCeEEEEEcCCCCCCCCee---------ee--ec----cCCCeeEEEecCC
Q 014454 227 EGVVEDVAWH---LR----HEYLFGSVGDDQYLLIWDLRTPSVSKPVQ---------SV--VA----HQSEVNCLAFNPF 284 (424)
Q Consensus 227 ~~~v~~~~~~---~~----~~~~~~s~~~dg~i~i~d~~~~~~~~~~~---------~~--~~----~~~~v~~v~~~~~ 284 (424)
.+.+.++++. |. +...+++=...+.|.|+|+.+++..+... .+ .+ -...+..|+.+|+
T Consensus 151 ~S~l~di~VD~~~~~~~c~~~~aYItD~~~~gLIVydl~~~~swRv~~~~~~pd~~~~~~i~G~~~~~~~Gi~gIaLsp~ 230 (381)
T 3q6k_A 151 PTYFGGFAVDVANPKGDCSETFVYITNFLRGALFIYDHKKQDSWNVTHPTFKAERPTKFDYGGKEYEFKAGIFGITLGDR 230 (381)
T ss_dssp GGGEEEEEEEESCTTTTSCSEEEEEEETTTTEEEEEETTTTEEEEEECGGGSCCSCEEEEETTEEEEECCCEEEEEECCC
T ss_pred CCccceEEEecccCCCCCCccEEEEEcCCCCcEEEEECCCCcEEEEccCCCccccCcceEECCEEeEeccCceEEEecCC
Confidence 4567888887 22 34455555567889999999865421110 00 01 1246888999987
Q ss_pred ----CCeEEEEEeCCCcEEEEE---CCCC--CCcceEecCC--CCCEEEEEEc-CCCCcEEEEEECCCeEEEeeCCC-CC
Q 014454 285 ----NEWILATGSTDKTVKLFD---LRKI--STALHTFDSH--KEEVFQVGWN-PKNETILASCCLGRRLMVWDLSR-ID 351 (424)
Q Consensus 285 ----~~~~l~tg~~dg~i~iwd---~~~~--~~~~~~~~~h--~~~v~~~~~s-p~~~~~l~s~~~dg~i~iwd~~~-~~ 351 (424)
++.+....-....+.--. +++. ...++.+... ...-..++.. .+| .++++--....|..|+... .-
T Consensus 231 ~~~~~~~LYf~plss~~ly~V~T~~L~~~~~~~~v~~~G~kg~~s~~~~~~~D~~~G-~ly~~~~~~~aI~~w~~~~~~~ 309 (381)
T 3q6k_A 231 DSEGNRPAYYLAGSAIKVYSVNTKELKQKGGKLNPELLGNRGKYNDAIALAYDPKTK-VIFFAEANTKQVSCWNTQKMPL 309 (381)
T ss_dssp CTTSCCEEEEEESSCSEEEEEEHHHHSSTTCCCCCEEEEECCTTCCEEEEEECTTTC-EEEEEESSSSEEEEEETTSCSB
T ss_pred cCCCCeEEEEEECCCCcEEEEEHHHhhCcchhhceEEeeecCCCCCcceEEEeCCCC-eEEEEeccCCeEEEEeCCCCcc
Confidence 665544444333333332 2221 1122222211 1334456775 455 5677777788899999865 11
Q ss_pred cccCCCCcCCCCCeeeEEEcCCCCCcceEEeCCCCCcEEEEEe
Q 014454 352 EEQTPEDAEDGPPELLFIHGGHTSKISDFSWNPCEDWVISSVA 394 (424)
Q Consensus 352 ~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~ 394 (424)
... ....+. ....-..+.++.+.+++. +.+.++
T Consensus 310 ~~~--------n~~~l~-~d~~l~~pd~~~i~~~g~-Lwv~sn 342 (381)
T 3q6k_A 310 RMK--------NTDVVY-TSSRFVFGTDISVDSKGG-LWFMSN 342 (381)
T ss_dssp CGG--------GEEEEE-ECTTCCSEEEEEECTTSC-EEEEEC
T ss_pred ccC--------ceEEEE-ECCCccccCeEEECCCCe-EEEEEC
Confidence 000 002222 222333567777777776 555544
No 341
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=92.33 E-value=9.8 Score=37.91 Aligned_cols=194 Identities=12% Similarity=0.080 Sum_probs=102.8
Q ss_pred ceeEEEecCCCCcEEEEEeCCCeEEEEeCCCCCCCCCCCCCCCCcEEEe--c-----CCCceeEEEecCCCCceEEEEeC
Q 014454 127 EVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLR--G-----HSTEGYGLSWSKFKEGHLLSGSD 199 (424)
Q Consensus 127 ~v~~~~~~p~~~~~latg~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~--~-----h~~~v~~l~~~~~~~~~l~s~~~ 199 (424)
.|.++.-..++...+ |+ ++-+..|+..+ .. ...+. . ....|.++.-.+++ .|-.|+.
T Consensus 374 ~v~~i~~d~~g~lWi--gt-~~GL~~~~~~~--------~~---~~~~~~~~~~~~~~~~~v~~i~~d~~g--~lWigT~ 437 (758)
T 3ott_A 374 RIRHIYEDKEQQLWI--AT-DGSINRYDYAT--------RQ---FIHYNIVDNTGTYNTNWTYYIFEDTAG--QLWISTC 437 (758)
T ss_dssp CEEEEEECTTSCEEE--EE-TTEEEEEETTT--------TE---EEEEEEECCC--CBSSSEEEEEECTTS--EEEEEES
T ss_pred ceEEEEECCCCCEEE--Ee-CCcHhhcCcCC--------Cc---EEEeecCCCcCCCCCceEEEEEEcCCC--CEEEEEC
Confidence 477777777665333 44 35688888765 11 11111 1 12347777765544 4666776
Q ss_pred CCcEEEEeCCCCC--CCCcccceeeee---c-CCccEeeEEEecCCCcEEEEEeCCCeEEEEEcCCCCCCCCeeeeec--
Q 014454 200 DAQICLWDINAAP--KNKSLEAMQIFK---V-HEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVA-- 271 (424)
Q Consensus 200 dg~i~iwd~~~~~--~~~~~~~~~~~~---~-~~~~v~~~~~~~~~~~~~~s~~~dg~i~i~d~~~~~~~~~~~~~~~-- 271 (424)
.+-|.++|..+.. ....+.....+. + ....|.++...+++. +.+.++..+-|..+|.++.. +..+..
T Consensus 438 ~~Gl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~-lWi~~~t~~Gl~~~d~~~~~----~~~~~~~~ 512 (758)
T 3ott_A 438 LGGIFVVDKHKLMQSTSGQYIAEQNYSVHNGLSGMFINQIIPDNEGN-VWVLLYNNKGIDKINPRTRE----VTKLFADE 512 (758)
T ss_dssp SSCEEEEEHHHHHHCCSSEEECSEEECGGGTCSCSCEEEEEECTTSC-EEEEETTCSSEEEEETTTTE----EEEECTTT
T ss_pred CCceEEEccccccccCCcceecccccccccccccceeeeEEEcCCCC-EEEEccCCCCcEEEeCCCCc----eEEecCCC
Confidence 6668888754210 000010000111 1 123588888888775 54333444558888987643 222211
Q ss_pred --cCCCeeEEEecCCCCeEEEEEeCCCcEEEEECCCCCCcceEe--c-CCCCCEEEEEEcCCCCcEEEEEECCCeEEEee
Q 014454 272 --HQSEVNCLAFNPFNEWILATGSTDKTVKLFDLRKISTALHTF--D-SHKEEVFQVGWNPKNETILASCCLGRRLMVWD 346 (424)
Q Consensus 272 --~~~~v~~v~~~~~~~~~l~tg~~dg~i~iwd~~~~~~~~~~~--~-~h~~~v~~~~~sp~~~~~l~s~~~dg~i~iwd 346 (424)
....+.++....+|. |..|+..| +..||..+. . ...+ . .....|.++... ++ . |-.++..| |..+|
T Consensus 513 ~~~~~~~~~i~~d~~g~--lWigt~~G-l~~~~~~~~-~-~~~~~~~gl~~~~i~~i~~~-~g-~-lWi~t~~G-l~~~~ 583 (758)
T 3ott_A 513 LTGEKSPNYLLCDEDGL--LWVGFHGG-VMRINPKDE-S-QQSISFGSFSNNEILSMTCV-KN-S-IWVSTTNG-LWIID 583 (758)
T ss_dssp SCGGGCEEEEEECTTSC--EEEEETTE-EEEECC--C-C-CCBCCCCC---CCEEEEEEE-TT-E-EEEEESSC-EEEEE
T ss_pred cCCCcccceEEECCCCC--EEEEecCc-eEEEecCCC-c-eEEecccCCCccceEEEEEC-CC-C-EEEECCCC-eEEEc
Confidence 124578888888776 44455554 888887652 2 2222 1 123567888764 55 3 44555666 77788
Q ss_pred CCCC
Q 014454 347 LSRI 350 (424)
Q Consensus 347 ~~~~ 350 (424)
....
T Consensus 584 ~~~~ 587 (758)
T 3ott_A 584 RKTM 587 (758)
T ss_dssp TTTC
T ss_pred CCCc
Confidence 7653
No 342
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=92.00 E-value=6.8 Score=35.38 Aligned_cols=148 Identities=12% Similarity=0.091 Sum_probs=68.2
Q ss_pred ceeEEEecCCC-CceEEEEeCCCcEEEEeCCCCCCCCcccceeeee----------------cCCccEeeEEEecCC-Cc
Q 014454 180 EGYGLSWSKFK-EGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFK----------------VHEGVVEDVAWHLRH-EY 241 (424)
Q Consensus 180 ~v~~l~~~~~~-~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~----------------~~~~~v~~~~~~~~~-~~ 241 (424)
.|.+|++.|.. .+.|..+...+.|... ..+. .+++.+.... .....+.+|.++|.. ..
T Consensus 116 ~i~~l~~~~~~~~~~l~~g~~~ggl~~S--~DgG--~tW~~~~~~~~~p~~~~~~~~~~~g~~~~~~i~~i~~d~~~~~~ 191 (394)
T 3b7f_A 116 HVFWLTPGHASEPGTWYAGTSPQGLFRS--TDHG--ASWEPVAGFNDHPMRRAWTGGEQDGTPDGPKMHSILVDPRDPKH 191 (394)
T ss_dssp EEEEEEECCTTSTTCEEEEEETTEEEEE--SSTT--SBCEECHHHHTCTTHHHHHCCC----CCCCEEEEEEECTTCTTC
T ss_pred ceeEEEeCCCCCCCEEEEEecCCcEEEE--cCCC--CCeEECcCccCCccccccccccccCCCCCCceeEEEECCCCCCE
Confidence 57788988743 4456666665655443 2221 1121111110 122467889998853 34
Q ss_pred EEEEEeCCCeEEEEEcCCCCCCCCeee-eec-c--------CCCeeEEEecCCCCeEEEEEeCCCcEEEEECCCCCCcce
Q 014454 242 LFGSVGDDQYLLIWDLRTPSVSKPVQS-VVA-H--------QSEVNCLAFNPFNEWILATGSTDKTVKLFDLRKISTALH 311 (424)
Q Consensus 242 ~~~s~~~dg~i~i~d~~~~~~~~~~~~-~~~-~--------~~~v~~v~~~~~~~~~l~tg~~dg~i~iwd~~~~~~~~~ 311 (424)
++ .+..++.|...+ ..++....+.. ... + ...+.+|+++|.+...|..+...+ |...+-. +....
T Consensus 192 l~-vg~~~ggl~~s~-DgG~tW~~~~~~~~~~~~p~~~~~~g~~~~~i~~~~~~~~~l~vg~~~g-l~~s~D~--G~tW~ 266 (394)
T 3b7f_A 192 LY-IGMSSGGVFEST-DAGTDWKPLNRGCAANFLPDPNVEFGHDPHCVVQHPAAPDILYQQNHCG-IYRMDRR--EGVWK 266 (394)
T ss_dssp EE-EEEETBEEEEES-STTSSCEECCTTCCCTTSSSSSSSSCBCEEEEEECSSSTTEEEEEETTE-EEEEETT--TTEEE
T ss_pred EE-EEECCCCEEEEC-CCCCCceECCCCccccccCCCccccCcceeEEEECCCCCCEEEEEcCCe-EEEeCCC--CCcce
Confidence 55 444344443332 12221111100 000 0 124889999987433566666544 4443321 22222
Q ss_pred Eec--CCC---CCEEEEEEcCCCCcEEEEE
Q 014454 312 TFD--SHK---EEVFQVGWNPKNETILASC 336 (424)
Q Consensus 312 ~~~--~h~---~~v~~~~~sp~~~~~l~s~ 336 (424)
.+. ... ..+..++++|..+..|.++
T Consensus 267 ~~~~~l~~~~~~~~~~i~~~p~~~~~l~~~ 296 (394)
T 3b7f_A 267 RIGDAMPREVGDIGFPIVVHQRDPRTVWVF 296 (394)
T ss_dssp CGGGGSCTTTCSCEEEEEECSSCTTCEEEE
T ss_pred ECCCCCCCCCccceEEEEECCCCCCEEEEE
Confidence 211 111 3467788887443334444
No 343
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=91.41 E-value=3.1 Score=41.11 Aligned_cols=108 Identities=11% Similarity=0.073 Sum_probs=56.0
Q ss_pred CcEEEEEeCCC--eEEEEEcCCCCCCCCeee---eeccCCCeeEEEecCCCCeEEEEEeC--C-----CcEEEEECCCCC
Q 014454 240 EYLFGSVGDDQ--YLLIWDLRTPSVSKPVQS---VVAHQSEVNCLAFNPFNEWILATGST--D-----KTVKLFDLRKIS 307 (424)
Q Consensus 240 ~~~~~s~~~dg--~i~i~d~~~~~~~~~~~~---~~~~~~~v~~v~~~~~~~~~l~tg~~--d-----g~i~iwd~~~~~ 307 (424)
..+++.|+.++ .+.+||+.+..- ..+.. .........++.+......+++.|+. + ..+.+||+.+..
T Consensus 501 ~~iyv~GG~~~~~~v~~yd~~t~~W-~~~~~~g~~p~~r~~~~a~v~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~~~~ 579 (695)
T 2zwa_A 501 GNVLILGGVTEGPAMLLYNVTEEIF-KDVTPKDEFFQNSLVSAGLEFDPVSKQGIILGGGFMDQTTVSDKAIIFKYDAEN 579 (695)
T ss_dssp SCEEEECCBCSSCSEEEEETTTTEE-EECCCSSGGGGSCCBSCEEEEETTTTEEEEECCBCTTSSCBCCEEEEEEECTTC
T ss_pred CEEEEECCCCCCCCEEEEECCCCce-EEccCCCCCCCcccceeEEEEeCCCCEEEEECCcCCCCCeeeCcEEEEEccCCc
Confidence 35777777654 689999987541 11111 11122223345556553457888875 2 358899988733
Q ss_pred C--c--ceEec----CCCCCEEEEEEcCCCCcEEEEEECC--------CeEEEeeCCCC
Q 014454 308 T--A--LHTFD----SHKEEVFQVGWNPKNETILASCCLG--------RRLMVWDLSRI 350 (424)
Q Consensus 308 ~--~--~~~~~----~h~~~v~~~~~sp~~~~~l~s~~~d--------g~i~iwd~~~~ 350 (424)
- . ...+. ........+.+ .++ .+++.|+.+ ..+.+||+.+.
T Consensus 580 w~~~~~W~~~~~~p~~~R~~~~~~~~-~~~-~iyv~GG~~~~~~~~~~~~v~~yd~~t~ 636 (695)
T 2zwa_A 580 ATEPITVIKKLQHPLFQRYGSQIKYI-TPR-KLLIVGGTSPSGLFDRTNSIISLDPLSE 636 (695)
T ss_dssp SSCCEEEEEEEECGGGCCBSCEEEEE-ETT-EEEEECCBCSSCCCCTTTSEEEEETTTT
T ss_pred cccceEEEEcCCCCCCCcccceEEEe-CCC-EEEEECCccCCCCCCCCCeEEEEECCCC
Confidence 0 0 11111 11112222333 224 467777642 45888888764
No 344
>2cn3_A Xyloglucanase, beta-1,4-xyloglucan hydrolase; glycosylhydrolase, family GH74; HET: GLC BGC GAL; 1.95A {Clostridium thermocellum} PDB: 2cn2_A*
Probab=91.41 E-value=12 Score=37.15 Aligned_cols=110 Identities=13% Similarity=0.064 Sum_probs=59.1
Q ss_pred CceeEEEecCCCCcEEEEEeCCCeEEEEeCCCCCCCCCCCCCCCCcEEEecC-------CCceeEEEecCCCCceEEEEe
Q 014454 126 GEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGH-------STEGYGLSWSKFKEGHLLSGS 198 (424)
Q Consensus 126 ~~v~~~~~~p~~~~~latg~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~h-------~~~v~~l~~~~~~~~~l~s~~ 198 (424)
+.|..|+++|.++..+.++...|.|+..+-.. ..+.+ +..+ ...|.+|++.|..+..++.+.
T Consensus 23 g~i~~i~~~p~~~~~~~~~~~~ggv~rS~D~G--------~tW~~---i~~~~~~~~~~~~~i~~i~~dp~~~~~v~v~~ 91 (737)
T 2cn3_A 23 GFMPGIVFNETEKDLIYARAAIGGAYRWDPST--------ETWIP---LLDHFQMDEYSYYGVESIATDPVDPNRVYIVA 91 (737)
T ss_dssp SCCCEEEECSSSTTCEEEECSSSCEEEEETTT--------TEEEE---CCTTCCGGGGGGGCEEEEEECSSSTTCEEEEE
T ss_pred ceeeEEEECCCCCCEEEEEecCCcEEEeCCCC--------CCEEE---CcCccCcccccCCCcceEEeCCCCCCEEEEEe
Confidence 38999999998766677777667666655332 11221 1111 235889999986655555554
Q ss_pred CC-------CcEEEEeCCCCCCCCcccceee-ee--cC---CccEeeEEEecCCCcEEEEEeC
Q 014454 199 DD-------AQICLWDINAAPKNKSLEAMQI-FK--VH---EGVVEDVAWHLRHEYLFGSVGD 248 (424)
Q Consensus 199 ~d-------g~i~iwd~~~~~~~~~~~~~~~-~~--~~---~~~v~~~~~~~~~~~~~~s~~~ 248 (424)
.. +...||.-..+.. +.+.+.. +. .+ ...+..|+++|.++..+.++..
T Consensus 92 ~~~~~~~~~~~~~l~~S~DgG~--TW~~~~~~~~~~~~~~g~~~~~~l~~~p~~~~~v~~g~~ 152 (737)
T 2cn3_A 92 GMYTNDWLPNMGAILRSTDRGE--TWEKTILPFKMGGNMPGRSMGERLAIDPNDNRILYLGTR 152 (737)
T ss_dssp CSCSSSSSCCCCEEEEESSSSS--SCEEEECSSCCCTTSTTTTSCCCEEECSSCTTCEEEECS
T ss_pred cccccccccCCccEEEeCCCCC--CcccCCCCcccCCCcCcccccceEEECCCCCCEEEEeec
Confidence 21 1245555444332 2222211 10 00 1134679999876555545553
No 345
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=90.86 E-value=14 Score=36.79 Aligned_cols=232 Identities=11% Similarity=0.040 Sum_probs=125.3
Q ss_pred CCceeEEEecCCCCcEEEEEeCCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCceeEEEecCCCCceEEEEeCCCcEE
Q 014454 125 DGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDDAQIC 204 (424)
Q Consensus 125 ~~~v~~~~~~p~~~~~latg~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~ 204 (424)
...|++|.-..+|. |-.|+.+| +..||-..... ..... ......|.++.-..++ .|..|+.+| +.
T Consensus 21 ~n~V~~I~qD~~G~--lWigT~~G-L~ryDG~~~~~-------~~~~~--~~~~~~i~~i~~d~~g--~lWigT~~G-l~ 85 (758)
T 3ott_A 21 ASVVSCFLQDSEGL--IWIGSNKG-LFSYDGYSTQQ-------HFTYG--ENNNTRIYCGVIIDNT--YLYMGTDNG-IL 85 (758)
T ss_dssp CCCEEEEEECTTSC--EEEEESSC-EEEECSSCEEE-------CSCTT--STTSSCEEEEEEETTT--EEEEEETTE-EE
T ss_pred cceEEEEEECCCCC--EEEEECCC-ccccCCCceEE-------EEccC--CCCCceEEEEEEcCCC--cEEEEeCCC-eE
Confidence 45788888877775 44455666 55566432000 00000 0123457777766544 466777665 77
Q ss_pred EEeCCCCCCCCcccceeeeecCCccEeeEEEecCCCcEEEEEeCCCeEEEEEcCCCCCCCCeeeee-----ccCCCeeEE
Q 014454 205 LWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVV-----AHQSEVNCL 279 (424)
Q Consensus 205 iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~dg~i~i~d~~~~~~~~~~~~~~-----~~~~~v~~v 279 (424)
.||..+..... ........|.++.. .++ .+. .++.+ -|..+|..+.. +..+. .....|.++
T Consensus 86 ~yd~~~~~f~~------~~~~~~~~i~~i~~-~~g-~lW-igt~~-Gl~~~~~~~~~----~~~~~~~~~~l~~~~i~~i 151 (758)
T 3ott_A 86 VYNYRADRYEQ------PETDFPTDVRTMAL-QGD-TLW-LGALN-GLYTYQLQSRK----LTSFDTRRNGLPNNTIYSI 151 (758)
T ss_dssp EEETTTTEECC------CSCCCCSCEEEEEE-ETT-EEE-EEETT-EEEEEETTTCC----EEEECHHHHCCSCSCEEEE
T ss_pred EEeCCCCEEEC------cccCCCceEEEEEe-cCC-cEE-EEcCC-cceeEeCCCCe----EEEeccCCCCcCCCeEEEE
Confidence 89986542211 00111235666654 344 454 45555 68888887643 22221 123468888
Q ss_pred EecCCCCeEEEEEeCCCcEEEEECCCCCCcceEecC------CCCCEEEEEEcCCCCcEEEEEECCCeEEEeeCCCCCcc
Q 014454 280 AFNPFNEWILATGSTDKTVKLFDLRKISTALHTFDS------HKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEE 353 (424)
Q Consensus 280 ~~~~~~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~~------h~~~v~~~~~sp~~~~~l~s~~~dg~i~iwd~~~~~~~ 353 (424)
....++. |..|+.. -+..+|..+ .. ...+.. ....|.++...+++.. |..|+.. -+..++......
T Consensus 152 ~~d~~g~--lWigt~~-Gl~~~~~~~-~~-~~~~~~~~~~~~~~~~i~~i~~d~~~~~-lWigt~~-Gl~~~~~~~~~~- 223 (758)
T 3ott_A 152 IRTKDNQ--IYVGTYN-GLCRYIPSN-GK-FEGIPLPVHSSQSNLFVNSLLEDTTRQC-VWIGTEG-YLFQYFPSTGQI- 223 (758)
T ss_dssp EECTTCC--EEEEETT-EEEEEETTT-TE-EEEECCCCCTTCSSCCEEEEEEETTTTE-EEEEEEE-EEEEEETTTTEE-
T ss_pred EEcCCCC--EEEEeCC-CHhhCccCC-Cc-eEEecCCCccccccceeEEEEEECCCCE-EEEEECC-CCeEEcCCCCeE-
Confidence 8888776 3345554 477788765 22 222211 1234888888876643 3334433 477888765321
Q ss_pred cCCCCcCCCCCeeeEEEcCCCCCcceEEeCCCCCcEEEEEeCCCcEEEEecCCccC
Q 014454 354 QTPEDAEDGPPELLFIHGGHTSKISDFSWNPCEDWVISSVAEDNILQIWQMAENIY 409 (424)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~ 409 (424)
.....+ ....|.++....++. +.+. ..+ -+.+++..++.+
T Consensus 224 -----------~~~~~l--~~~~i~~i~~d~~g~-lWig-T~~-Gl~~~~~~~~~~ 263 (758)
T 3ott_A 224 -----------KQTEAF--HNNSIKSLALDGNGD-LLAG-TDN-GLYVYHNDTTPL 263 (758)
T ss_dssp -----------EEEEEE--EEEEEEEEEECTTCC-EEEE-ETT-EEEEECCTTSCC
T ss_pred -----------EeccCC--CCCeEEEEEEcCCCC-EEEE-eCC-ceeEEecCCCcE
Confidence 111111 123478888888888 4443 344 488888876544
No 346
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=90.78 E-value=7.7 Score=33.70 Aligned_cols=103 Identities=7% Similarity=0.064 Sum_probs=56.1
Q ss_pred EEecCCCcEEEEE---eCCCeEEEEEcCCCCCCCCeeeeeccCCCeeEEEecCCCCeEEEEEeCCCcEEEEECCCCCCcc
Q 014454 234 AWHLRHEYLFGSV---GDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATGSTDKTVKLFDLRKISTAL 310 (424)
Q Consensus 234 ~~~~~~~~~~~s~---~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~l~tg~~dg~i~iwd~~~~~~~~ 310 (424)
.|++++..++.+- .....|...++.... ...+..+.. .+++++++.+..+......|...++.. +...
T Consensus 110 ~~s~~g~~Iy~~~~~~~~~~~Iy~~~~dGs~----~~~lt~~~~----~~~~~~g~~iy~t~~g~~~Iy~~~l~g-~~~~ 180 (302)
T 3s25_A 110 YASLIGNYIYYLHYDTQTATSLYRIRIDGEE----KKKIKNHYL----FTCNTSDRYFYYNNPKNGQLYRYDTAS-QSEA 180 (302)
T ss_dssp EEEEETTEEEEEEESSSSCEEEEEEETTSCC----CEEEESSCC----CCSEEETTEEEEECTTTCCEEEEETTT-TEEE
T ss_pred EEEEeCCEEEEEeecCCCCceEEEEECCCCC----eEEEeCCCc----eEeeEECCEEEEEeCCCceEEEEECCC-CCEE
Confidence 5677787776554 234456666665433 233333322 456778887666655467888888775 3222
Q ss_pred eEecCCCCCEEEEEEcCCCCcEEEEEECCC-eEEEeeCCC
Q 014454 311 HTFDSHKEEVFQVGWNPKNETILASCCLGR-RLMVWDLSR 349 (424)
Q Consensus 311 ~~~~~h~~~v~~~~~sp~~~~~l~s~~~dg-~i~iwd~~~ 349 (424)
..+. +... ..++|+++.++.+...++ .|..-++..
T Consensus 181 ~l~~---~~~~-~~~~P~g~~iy~t~~~~~~~I~~~~ldG 216 (302)
T 3s25_A 181 LFYD---CNCY-KPVVLDDTNVYYMDVNRDNAIVHVNINN 216 (302)
T ss_dssp EEEC---SCEE-EEEEEETTEEEEEEGGGTTEEEEECSSS
T ss_pred EEeC---CCcc-ceeeecCCEEEEEEcCCCcEEEEEECCC
Confidence 2222 2222 345688876554443332 454445543
No 347
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=90.41 E-value=11 Score=37.13 Aligned_cols=111 Identities=13% Similarity=0.089 Sum_probs=55.9
Q ss_pred CCCcEEEEEeCC------CeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCceeEEEecCCCCceEEEEeCCC--cEEEEe
Q 014454 136 QNPFLIATKTVS------AEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDDA--QICLWD 207 (424)
Q Consensus 136 ~~~~~latg~~d------g~v~iw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg--~i~iwd 207 (424)
++ .+++.|+.+ ..+.+||..+ ..+.....+.... .-.+++...++. +++.|+.++ .+.+||
T Consensus 451 ~~-~lyv~GG~~~~~~~~~dv~~yd~~t--------~~W~~~~~~p~~R-~~h~~~~~~~~~-iyv~GG~~~~~~v~~yd 519 (695)
T 2zwa_A 451 NN-QLLLIGGRKAPHQGLSDNWIFDMKT--------REWSMIKSLSHTR-FRHSACSLPDGN-VLILGGVTEGPAMLLYN 519 (695)
T ss_dssp TT-EEEEECCBSSTTCBCCCCEEEETTT--------TEEEECCCCSBCC-BSCEEEECTTSC-EEEECCBCSSCSEEEEE
T ss_pred CC-EEEEEcCCCCCCCccccEEEEeCCC--------CcEEECCCCCCCc-ccceEEEEcCCE-EEEECCCCCCCCEEEEE
Confidence 45 477777643 3577888776 2222221111111 111222222344 677777654 688999
Q ss_pred CCCCCCCCcccceee---eecCCccEeeEEEecCCCcEEEEEeC--C-----CeEEEEEcCCCC
Q 014454 208 INAAPKNKSLEAMQI---FKVHEGVVEDVAWHLRHEYLFGSVGD--D-----QYLLIWDLRTPS 261 (424)
Q Consensus 208 ~~~~~~~~~~~~~~~---~~~~~~~v~~~~~~~~~~~~~~s~~~--d-----g~i~i~d~~~~~ 261 (424)
+.+.. +..+.. ..........+.+......+++.|+. + ..+.+||+.+..
T Consensus 520 ~~t~~----W~~~~~~g~~p~~r~~~~a~v~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~~~~ 579 (695)
T 2zwa_A 520 VTEEI----FKDVTPKDEFFQNSLVSAGLEFDPVSKQGIILGGGFMDQTTVSDKAIIFKYDAEN 579 (695)
T ss_dssp TTTTE----EEECCCSSGGGGSCCBSCEEEEETTTTEEEEECCBCTTSSCBCCEEEEEEECTTC
T ss_pred CCCCc----eEEccCCCCCCCcccceeEEEEeCCCCEEEEECCcCCCCCeeeCcEEEEEccCCc
Confidence 87642 111111 11111122335555553557777765 2 458899998865
No 348
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=89.63 E-value=5.8 Score=36.91 Aligned_cols=114 Identities=11% Similarity=0.062 Sum_probs=61.7
Q ss_pred CceeEEEecCCCCceEEEEeCCCcEEEEeCCCCCCCCccccee-eee-----cCCccEeeEEEecC---CCcEEEEEeCC
Q 014454 179 TEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQ-IFK-----VHEGVVEDVAWHLR---HEYLFGSVGDD 249 (424)
Q Consensus 179 ~~v~~l~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~-~~~-----~~~~~v~~~~~~~~---~~~~~~s~~~d 249 (424)
...+.|+|.|++...|+++...|.|++++.........+..+. .+. ........|+++|+ +..++++-+.+
T Consensus 14 ~~P~~~a~~pdG~~rl~V~er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~f~~n~~lYv~yt~~ 93 (463)
T 2wg3_C 14 RQPVGALHSGDGSQRLFILEKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPNYKKNGKLYVSYTTN 93 (463)
T ss_dssp SSEEEEECCSSSSCCEEEEETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTTHHHHCEEEEEEEEC
T ss_pred CCceEEEECCCCCeEEEEEeCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCCCcCCCEEEEEEeCC
Confidence 3467999999986447777889999999754321111111111 011 11456789999996 34455554321
Q ss_pred ------------CeEEEEEcCCC--CC-----CCCeeeee--ccCCCeeEEEecCCCCeEEEEEe
Q 014454 250 ------------QYLLIWDLRTP--SV-----SKPVQSVV--AHQSEVNCLAFNPFNEWILATGS 293 (424)
Q Consensus 250 ------------g~i~i~d~~~~--~~-----~~~~~~~~--~~~~~v~~v~~~~~~~~~l~tg~ 293 (424)
..|.-|.+... .. .+.+..+. ........|+|.|+|. |+++.+
T Consensus 94 ~~~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~g~~l~fgpDG~-LYv~~G 157 (463)
T 2wg3_C 94 QERWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKHLGGQLLFGPDGF-LYIILG 157 (463)
T ss_dssp CCSSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSSCEEEEEECTTSC-EEEEEC
T ss_pred CCCcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCcccCCcEeECCCCc-EEEEeC
Confidence 13444655432 10 11122221 1223468899999997 444444
No 349
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=89.26 E-value=3.3 Score=36.82 Aligned_cols=19 Identities=11% Similarity=0.046 Sum_probs=13.0
Q ss_pred cEEEEEeC----------CCeEEEEeCCC
Q 014454 139 FLIATKTV----------SAEVYVFDYSK 157 (424)
Q Consensus 139 ~~latg~~----------dg~v~iw~~~~ 157 (424)
.+++.|+. ...+.+||..+
T Consensus 67 ~lyv~GG~~~~~~~~~~~~~~v~~yd~~~ 95 (357)
T 2uvk_A 67 NLYVFGGIGKNSEGLTQVFNDVHKYNPKT 95 (357)
T ss_dssp EEEEECCEEECTTSCEEECCCEEEEETTT
T ss_pred EEEEEcCCCCCCCccceeeccEEEEeCCC
Confidence 46666665 24688898876
No 350
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=88.14 E-value=2.4 Score=40.12 Aligned_cols=96 Identities=8% Similarity=0.177 Sum_probs=63.3
Q ss_pred EEEEEcCCCCC-CCCeeeeeccCCCeeEEEecCCCCeEEEEEeCCCcEEEEECCCCCC-----------c-ceEecCCCC
Q 014454 252 LLIWDLRTPSV-SKPVQSVVAHQSEVNCLAFNPFNEWILATGSTDKTVKLFDLRKIST-----------A-LHTFDSHKE 318 (424)
Q Consensus 252 i~i~d~~~~~~-~~~~~~~~~~~~~v~~v~~~~~~~~~l~tg~~dg~i~iwd~~~~~~-----------~-~~~~~~h~~ 318 (424)
+.|.|.+.... ...+..+-.-......+..+|+|++++++|-.+.++.++|+++... . +.... -.-
T Consensus 300 v~ViD~~~~~~~~~~~~~~iP~pksPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e-~Gl 378 (638)
T 3sbq_A 300 TPVLDGRKKDGKDSKFTRYVPVPKNPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPE-LGL 378 (638)
T ss_dssp CCEEECSCBTTBCCSSEEEEEESSSCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCB-CCS
T ss_pred eeEEccccccccCCceEEEEeCCCCCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeecc-CCC
Confidence 56666654211 0112222223445667889999999888888899999999984211 1 11222 245
Q ss_pred CEEEEEEcCCCCcEEEEEECCCeEEEeeCCC
Q 014454 319 EVFQVGWNPKNETILASCCLGRRLMVWDLSR 349 (424)
Q Consensus 319 ~v~~~~~sp~~~~~l~s~~~dg~i~iwd~~~ 349 (424)
.....+|.++| ....+.--|..|.-|++..
T Consensus 379 GPlHt~Fd~~G-~aYTtlfidSqvvkWni~~ 408 (638)
T 3sbq_A 379 GPLHTTFDGRG-NAYTTLFIDSQVVKWNMEE 408 (638)
T ss_dssp CEEEEEECSSS-EEEEEETTTTEEEEEEHHH
T ss_pred cccEEEECCCC-ceEeeeeecceEEEEeccH
Confidence 67889999998 5566666899999999965
No 351
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=86.70 E-value=2.1 Score=37.91 Aligned_cols=113 Identities=11% Similarity=0.061 Sum_probs=62.7
Q ss_pred eEEEEeCCCcEEEEeCCCCCCCCcccceeeeecCCccEeeEEE--ecCCCcEEEEE-eCCCeEEEEEcCCCCCCCCeeee
Q 014454 193 HLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAW--HLRHEYLFGSV-GDDQYLLIWDLRTPSVSKPVQSV 269 (424)
Q Consensus 193 ~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~~~~~~s~-~~dg~i~i~d~~~~~~~~~~~~~ 269 (424)
+++.++.||.|.-+|..+++....+... ...++....- .+.+..+++.. +.||.|..++..++... ..+
T Consensus 12 ~V~v~t~dG~l~Ald~~tG~~~W~~~~~-----~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~---~~~ 83 (339)
T 2be1_A 12 ILIAADVEGGLHAVDRRNGHIIWSIEPE-----NFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQK---LPL 83 (339)
T ss_dssp EEEEEETTSCEEEEETTTTEEEEEECGG-----GSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEE---EEE
T ss_pred EEEEEeCCCeEEEEECCCCcEEEEecCC-----ccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCCcEE---eee
Confidence 6889999999999998887543332211 0011111100 01122344333 58999999998776421 111
Q ss_pred ec----cCCCeeE---EEe-cC----CCCeEEEEEeCCCcEEEEECCCCCCcceEecC
Q 014454 270 VA----HQSEVNC---LAF-NP----FNEWILATGSTDKTVKLFDLRKISTALHTFDS 315 (424)
Q Consensus 270 ~~----~~~~v~~---v~~-~~----~~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~~ 315 (424)
.. ..+++.. ... .+ .+. .+++|+.+|.+...|+++ ++.+..+..
T Consensus 84 ~~~~lv~~SP~~~~~~pvv~~~~~~~~~g-~Vy~Gs~~g~l~ald~~t-G~~~W~~~~ 139 (339)
T 2be1_A 84 SIRQLVSTSPLHLKTNIVVNDSGKIVEDE-KVYTGSMRTIMYTINMLN-GEIISAFGP 139 (339)
T ss_dssp EHHHHHTTCSEEEECC----------CCE-EEEECEEEEEEEEEETTT-CCEEEEEST
T ss_pred ccccceeccccccCCCceeecccccccCC-EEEEEecCCEEEEEECCC-CcEEEEEec
Confidence 10 1122221 000 00 233 588999999999999998 777777664
No 352
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=83.93 E-value=20 Score=30.96 Aligned_cols=141 Identities=9% Similarity=0.012 Sum_probs=72.2
Q ss_pred EEecCCCCceEEEEe--CCC--cEEEEeCCCCCCCCcccceeeeecCCccEeeEEEecCCCcEEEEEeCCCeEEEEEcCC
Q 014454 184 LSWSKFKEGHLLSGS--DDA--QICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRT 259 (424)
Q Consensus 184 l~~~~~~~~~l~s~~--~dg--~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~dg~i~i~d~~~ 259 (424)
..|++++. .|+-.. .++ .|..-++.... ...+..+.. .+++++++.++.+......|.+.++..
T Consensus 109 ~~~s~~g~-~Iy~~~~~~~~~~~Iy~~~~dGs~-------~~~lt~~~~----~~~~~~g~~iy~t~~g~~~Iy~~~l~g 176 (302)
T 3s25_A 109 IYASLIGN-YIYYLHYDTQTATSLYRIRIDGEE-------KKKIKNHYL----FTCNTSDRYFYYNNPKNGQLYRYDTAS 176 (302)
T ss_dssp EEEEEETT-EEEEEEESSSSCEEEEEEETTSCC-------CEEEESSCC----CCSEEETTEEEEECTTTCCEEEEETTT
T ss_pred cEEEEeCC-EEEEEeecCCCCceEEEEECCCCC-------eEEEeCCCc----eEeeEECCEEEEEeCCCceEEEEECCC
Confidence 36677777 455444 334 45555554321 112222222 456777887775654467888888766
Q ss_pred CCCCCCeeeeeccCCCeeEEEecCCCCeEEEEEeCCC-cEEEEECCCCCCcceEecCCCCCEEEEEEcCCCCcEEEEEE-
Q 014454 260 PSVSKPVQSVVAHQSEVNCLAFNPFNEWILATGSTDK-TVKLFDLRKISTALHTFDSHKEEVFQVGWNPKNETILASCC- 337 (424)
Q Consensus 260 ~~~~~~~~~~~~~~~~v~~v~~~~~~~~~l~tg~~dg-~i~iwd~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~l~s~~- 337 (424)
... ..+. ..... ..+.|++.+++.+-..++ .|..-++.. .....+.. ..+ ..|+|.+..++.+..
T Consensus 177 ~~~----~~l~--~~~~~-~~~~P~g~~iy~t~~~~~~~I~~~~ldG--~~~~~Lt~--~~~--~~~~~~g~~Iy~~~~~ 243 (302)
T 3s25_A 177 QSE----ALFY--DCNCY-KPVVLDDTNVYYMDVNRDNAIVHVNINN--PNPVVLTE--ANI--EHYNVYGSLIFYQRGG 243 (302)
T ss_dssp TEE----EEEE--CSCEE-EEEEEETTEEEEEEGGGTTEEEEECSSS--CCCEECSC--SCE--EEEEEETTEEEEEECS
T ss_pred CCE----EEEe--CCCcc-ceeeecCCEEEEEEcCCCcEEEEEECCC--CCeEEEeC--CCc--ceEEECCCEEEEEECC
Confidence 442 2221 12222 345688887666554433 555555554 33333432 233 347788875544322
Q ss_pred CCCeEEEeeCCC
Q 014454 338 LGRRLMVWDLSR 349 (424)
Q Consensus 338 ~dg~i~iwd~~~ 349 (424)
..+.|..-++.-
T Consensus 244 ~~~~i~~~~~DG 255 (302)
T 3s25_A 244 DNPALCVVKNDG 255 (302)
T ss_dssp SSCEEEEEETTS
T ss_pred CCcEEEEEECCC
Confidence 234555555543
No 353
>1sqj_A OXG-RCBH, oligoxyloglucan reducing-END-specific cellobiohydrolase; beta-propeller; 2.20A {Geotrichum SP} SCOP: b.69.13.1 b.69.13.1 PDB: 2ebs_A*
Probab=81.59 E-value=46 Score=33.33 Aligned_cols=156 Identities=13% Similarity=0.065 Sum_probs=78.1
Q ss_pred CCceeEEEecCCCCceEEEEeCCCcEEEEeCCCCCCCCcccceeeeec----CCccEeeEEEecCCCcEEEEEeCCCe--
Q 014454 178 STEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKV----HEGVVEDVAWHLRHEYLFGSVGDDQY-- 251 (424)
Q Consensus 178 ~~~v~~l~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~----~~~~v~~~~~~~~~~~~~~s~~~dg~-- 251 (424)
...|.+|+++|..+..++++...+.|...+ .+. .+.+.+..... ....+.+|+++|.+...+.++.....
T Consensus 14 ~g~i~~i~~~p~~~~~~~a~~~~ggv~rS~--DgG--~tW~~~~~~~~~~~~~~~~i~~ia~dp~~~~~i~~~~g~~~~~ 89 (789)
T 1sqj_A 14 GGYITGIVAHPKTKDLLYARTDIGGAYRWD--AGT--SKWIPLNDFIEAQDMNIMGTESIALDPNNPDRLYLAQGRYVGD 89 (789)
T ss_dssp CSCEEEEEECSSSTTCEEEEESSSCEEEEE--TTT--TEEEESCTTCCGGGGGGCSEEEEEEETTEEEEEEEEECSCTTS
T ss_pred CCcEEEEEECCCCCCEEEEEecCCCEEEec--CCC--CCeeECccCCCcccccCCceeEEEECCCCCCEEEEEeCccCCC
Confidence 457999999998777788888777665443 221 22222111000 12469999999865444434432211
Q ss_pred --EEEEEc-CCCCCCCCeeee-e-----ccCCCeeEEEecCCCCeEEEEEeCCCcEEEEECCCCCCcceEecC------C
Q 014454 252 --LLIWDL-RTPSVSKPVQSV-V-----AHQSEVNCLAFNPFNEWILATGSTDKTVKLFDLRKISTALHTFDS------H 316 (424)
Q Consensus 252 --i~i~d~-~~~~~~~~~~~~-~-----~~~~~v~~v~~~~~~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~~------h 316 (424)
-.||-. ..++....+... . .....+..++++|.....+..+...+. ||-....++--..+.. .
T Consensus 90 ~~~~v~~S~DgG~TW~~~~~~~~~~~~~~~~~~~~~iav~p~~~~~v~~g~~~~g--l~~S~DgG~TW~~~~~~~~~~~~ 167 (789)
T 1sqj_A 90 EWAAFYVSEDRGQSFTIYESPFPMGANDMGRNNGERLAVNPFNSNEVWMGTRTEG--IWKSSDRAKTWTNVTSIPDAFTN 167 (789)
T ss_dssp SCCEEEEESSTTSEEEEEECSSCCCTTSTTTTSCCCEEEETTEEEEEEEECSSSC--EEEESSTTSSCEEETTSCCCCST
T ss_pred cccEEEEECCCCCcceeccCCcccCccCCCccceeEEEEcCCCCCEEEEEeccCC--EEEECCCCcccCCCccCccccCC
Confidence 233333 333321111110 0 001135678888865555666664433 3333332332222221 1
Q ss_pred CCCEEEEEEcCCCCcEEEEEECC
Q 014454 317 KEEVFQVGWNPKNETILASCCLG 339 (424)
Q Consensus 317 ~~~v~~~~~sp~~~~~l~s~~~d 339 (424)
...+..+.++|.....++++..+
T Consensus 168 ~~~~~~i~~~p~~~~~~~~~~~~ 190 (789)
T 1sqj_A 168 GIGYTSVIFDPERNGTIYASATA 190 (789)
T ss_dssp TTCEEEEEECTTSTTCEEEEESS
T ss_pred CCCeEEEEECCCCCCEEEEEEcC
Confidence 24688899998654345555543
No 354
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=75.02 E-value=44 Score=29.46 Aligned_cols=110 Identities=6% Similarity=-0.004 Sum_probs=55.9
Q ss_pred EEEEEeCCCeEEEEeCCCCCCCCCCCCCCCCcEEEecC-CCceeEEEec--CCCCceEEEE-eCCCcEEEEeCCCCCCCC
Q 014454 140 LIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGH-STEGYGLSWS--KFKEGHLLSG-SDDAQICLWDINAAPKNK 215 (424)
Q Consensus 140 ~latg~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~h-~~~v~~l~~~--~~~~~~l~s~-~~dg~i~iwd~~~~~~~~ 215 (424)
++++++.||.|+-+|..+ .+...++... ..++....-. +.+...++.. +.||.|..++..++....
T Consensus 12 ~V~v~t~dG~l~Ald~~t----------G~~~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~~ 81 (339)
T 2be1_A 12 ILIAADVEGGLHAVDRRN----------GHIIWSIEPENFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQKL 81 (339)
T ss_dssp EEEEEETTSCEEEEETTT----------TEEEEEECGGGSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEEE
T ss_pred EEEEEeCCCeEEEEECCC----------CcEEEEecCCccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCCcEEe
Confidence 677788889888888766 3334444332 1122211100 1122233333 589999999987652211
Q ss_pred cccceeeeecCCccEee---EEE-e----cCCCcEEEEEeCCCeEEEEEcCCCCC
Q 014454 216 SLEAMQIFKVHEGVVED---VAW-H----LRHEYLFGSVGDDQYLLIWDLRTPSV 262 (424)
Q Consensus 216 ~~~~~~~~~~~~~~v~~---~~~-~----~~~~~~~~s~~~dg~i~i~d~~~~~~ 262 (424)
.+... .+. ...++.. ... . ..+. .+.+|+.+|.+...|+++++.
T Consensus 82 ~~~~~-~lv-~~SP~~~~~~pvv~~~~~~~~~g-~Vy~Gs~~g~l~ald~~tG~~ 133 (339)
T 2be1_A 82 PLSIR-QLV-STSPLHLKTNIVVNDSGKIVEDE-KVYTGSMRTIMYTINMLNGEI 133 (339)
T ss_dssp EEEHH-HHH-TTCSEEEECC----------CCE-EEEECEEEEEEEEEETTTCCE
T ss_pred eeccc-cce-eccccccCCCceeecccccccCC-EEEEEecCCEEEEEECCCCcE
Confidence 11000 000 1112211 000 0 0222 456899999999999999875
No 355
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=62.18 E-value=21 Score=36.62 Aligned_cols=34 Identities=15% Similarity=0.195 Sum_probs=27.4
Q ss_pred CcceEEeCCCCCcEEEEEeCCCcEEEEecCCccCC
Q 014454 376 KISDFSWNPCEDWVISSVAEDNILQIWQMAENIYH 410 (424)
Q Consensus 376 ~v~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~~ 410 (424)
.+.+++..++.. ++++-+.|+++|||++.++.+.
T Consensus 237 ~~~~~~~~~~~~-~lftl~~D~~LRiWsl~t~~~v 270 (950)
T 4gq2_M 237 TIISMIFLSTYN-VLVMLSLDYKLKVLDLSTNQCV 270 (950)
T ss_dssp CEEEEEEETTTT-EEEEEETTCEEEEEETTTTEEE
T ss_pred eEEEEeecCCCc-EEEEEECCCEEEEEECCCCCeE
Confidence 456677777777 6888899999999999998653
No 356
>3a0f_A Xyloglucanase; beta-propeller, hydrolase; 2.50A {Geotrichum SP}
Probab=62.11 E-value=1.3e+02 Score=29.90 Aligned_cols=163 Identities=12% Similarity=0.039 Sum_probs=77.8
Q ss_pred ccCCceeEEEecCCCCcEEEEEeCCCeEEEEeCCCCCCCCCCCCCCCCcEE-Ee----c----CCCceeEEEecCCCCce
Q 014454 123 NHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLR-LR----G----HSTEGYGLSWSKFKEGH 193 (424)
Q Consensus 123 ~h~~~v~~~~~~p~~~~~latg~~dg~v~iw~~~~~~~~~~~~~~~~~~~~-~~----~----h~~~v~~l~~~~~~~~~ 193 (424)
+-.+.|.+|+++|.++.++.++...|.|....-.. ..+.++.. +. + ....+.+|++.|..+..
T Consensus 18 g~~g~i~~i~~~p~~~~~~y~~~~~ggv~~S~DgG--------~tW~~~~~~~~~~~~~~~~~~~~~~~~ia~dp~~~~~ 89 (763)
T 3a0f_A 18 SGGGFISGLVAHPTEKDLIYARTDIGGTYRWNAAK--------WEWEPITDFIINNALAGNGANLLGTESIALDPHNPDR 89 (763)
T ss_dssp CBCSCEEEEEECSSSTTCEEEEESSSCEEEEETTT--------TEEEESCTTCBTTCSSSCCCCCCSEEEEECCTTCTTC
T ss_pred cCCCceeEEEeCCCCCCEEEEEeccCcEEEECCCC--------CCeeECccCccccccCCCcccccceeEEEECCCCCCE
Confidence 45678999999998877777777667655444221 11111110 00 0 12358899999865545
Q ss_pred EEEEeCC-----CcEEEEeCCCCCCCCcccceee-eec--C-Cc--cEeeEEEecCCCcEEEEEeCCCeEEEEEcCCCCC
Q 014454 194 LLSGSDD-----AQICLWDINAAPKNKSLEAMQI-FKV--H-EG--VVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSV 262 (424)
Q Consensus 194 l~s~~~d-----g~i~iwd~~~~~~~~~~~~~~~-~~~--~-~~--~v~~~~~~~~~~~~~~s~~~dg~i~i~d~~~~~~ 262 (424)
++.+... ....||.-..+. .+.+.+.. ... . .+ ....++++|..+..+.++...+.|. .....++.
T Consensus 90 ~~~~~g~~~~~~~~~~i~~S~DgG--~TW~~~~~~~~~~~~~~g~~~~~~l~v~p~~~~~v~a~~~~~~l~-~S~DgG~T 166 (763)
T 3a0f_A 90 LYLAQGDYVQWDPWAAFLVSDDRG--KTFKQYRSPVPMGANDMGRNGGERLAVNPHWTDELWFGSRTQGLW-RSTDRAQT 166 (763)
T ss_dssp EEEEECSCTTTCSCCEEEEESSTT--SSCEEEECSSCCCTTSTTTTSBCCEEECTTSTTCEEEECSSSCEE-EESSTTSS
T ss_pred EEEEecccccCCCCceEEEECCCC--CCceeccCCcccCccccCccccceEEECCCCCCEEEEEeCCCcEE-EECCCCcC
Confidence 5554321 123444433332 22222211 000 0 11 1246888886544444555444332 22233332
Q ss_pred CCCeeeeec---cCCCeeEEEecCCCCeEEEEEeCCC
Q 014454 263 SKPVQSVVA---HQSEVNCLAFNPFNEWILATGSTDK 296 (424)
Q Consensus 263 ~~~~~~~~~---~~~~v~~v~~~~~~~~~l~tg~~dg 296 (424)
.+.+..+.. ....+..|+++|.++..++.+..++
T Consensus 167 W~~~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~ 203 (763)
T 3a0f_A 167 WSRMNQLPDSSTYGIGIISVIFDPKNVGTAYVASHAV 203 (763)
T ss_dssp CEECTTSCCCSCTTTCEEEEEECSSSTTCEEEEESST
T ss_pred ccccccCcccCCCccceEEEEECCCCCCEEEEEEeCC
Confidence 221111111 1134778899886543345555554
No 357
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=60.20 E-value=70 Score=30.50 Aligned_cols=81 Identities=10% Similarity=0.056 Sum_probs=54.9
Q ss_pred CCCceeEEEecCCCCceEEEEeCCCcEEEEeCCCCCC-----C-Ccccc-eeeeecCCccEeeEEEecCCCcEEEEEeCC
Q 014454 177 HSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPK-----N-KSLEA-MQIFKVHEGVVEDVAWHLRHEYLFGSVGDD 249 (424)
Q Consensus 177 h~~~v~~l~~~~~~~~~l~s~~~dg~i~iwd~~~~~~-----~-~~~~~-~~~~~~~~~~v~~~~~~~~~~~~~~s~~~d 249 (424)
-.....++..+|+|...+++|-.+.++.++|++.-.. . ..-.. ..... -.-.....+|.++| +.+.+.--|
T Consensus 321 ~pksPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e-~GlGPlHt~Fd~~G-~aYTtlfid 398 (638)
T 3sbq_A 321 VPKNPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPE-LGLGPLHTTFDGRG-NAYTTLFID 398 (638)
T ss_dssp ESSSCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCB-CCSCEEEEEECSSS-EEEEEETTT
T ss_pred CCCCCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeecc-CCCcccEEEECCCC-ceEeeeeec
Confidence 3445678999999996666677799999999974210 0 00011 11111 23456788999988 677777799
Q ss_pred CeEEEEEcCC
Q 014454 250 QYLLIWDLRT 259 (424)
Q Consensus 250 g~i~i~d~~~ 259 (424)
..|..|++..
T Consensus 399 SqvvkWni~~ 408 (638)
T 3sbq_A 399 SQVVKWNMEE 408 (638)
T ss_dssp TEEEEEEHHH
T ss_pred ceEEEEeccH
Confidence 9999999974
No 358
>2cn3_A Xyloglucanase, beta-1,4-xyloglucan hydrolase; glycosylhydrolase, family GH74; HET: GLC BGC GAL; 1.95A {Clostridium thermocellum} PDB: 2cn2_A*
Probab=57.47 E-value=1.5e+02 Score=29.22 Aligned_cols=111 Identities=14% Similarity=0.045 Sum_probs=57.1
Q ss_pred ceeEEEecCCCCceEEEEeCCCcEEEEeCCCCCCCCcccceeeeec----CCccEeeEEEecCCC-cEEEEEeC-C----
Q 014454 180 EGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKV----HEGVVEDVAWHLRHE-YLFGSVGD-D---- 249 (424)
Q Consensus 180 ~v~~l~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~----~~~~v~~~~~~~~~~-~~~~s~~~-d---- 249 (424)
.|.+|+++|..+..++++...|.|...+= .. .+.+.+..... ....|.+|+++|.++ .++++.+. .
T Consensus 24 ~i~~i~~~p~~~~~~~~~~~~ggv~rS~D--~G--~tW~~i~~~~~~~~~~~~~i~~i~~dp~~~~~v~v~~~~~~~~~~ 99 (737)
T 2cn3_A 24 FMPGIVFNETEKDLIYARAAIGGAYRWDP--ST--ETWIPLLDHFQMDEYSYYGVESIATDPVDPNRVYIVAGMYTNDWL 99 (737)
T ss_dssp CCCEEEECSSSTTCEEEECSSSCEEEEET--TT--TEEEECCTTCCGGGGGGGCEEEEEECSSSTTCEEEEECSCSSSSS
T ss_pred eeeEEEECCCCCCEEEEEecCCcEEEeCC--CC--CCEEECcCccCcccccCCCcceEEeCCCCCCEEEEEecccccccc
Confidence 78999999987767777776666554432 21 22222111001 124689999998553 44444321 0
Q ss_pred -CeEEEEEcC-CCCCCCCeeee-e--c---cCCCeeEEEecCCCCeEEEEEeC
Q 014454 250 -QYLLIWDLR-TPSVSKPVQSV-V--A---HQSEVNCLAFNPFNEWILATGST 294 (424)
Q Consensus 250 -g~i~i~d~~-~~~~~~~~~~~-~--~---~~~~v~~v~~~~~~~~~l~tg~~ 294 (424)
+...||... .++..+.+... . . ....+.+|+++|..+..+..+..
T Consensus 100 ~~~~~l~~S~DgG~TW~~~~~~~~~~~~~~g~~~~~~l~~~p~~~~~v~~g~~ 152 (737)
T 2cn3_A 100 PNMGAILRSTDRGETWEKTILPFKMGGNMPGRSMGERLAIDPNDNRILYLGTR 152 (737)
T ss_dssp CCCCEEEEESSSSSSCEEEECSSCCCTTSTTTTSCCCEEECSSCTTCEEEECS
T ss_pred cCCccEEEeCCCCCCcccCCCCcccCCCcCcccccceEEECCCCCCEEEEeec
Confidence 123455443 33332222110 0 0 01134679999876555666653
No 359
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=56.02 E-value=30 Score=35.58 Aligned_cols=34 Identities=12% Similarity=-0.006 Sum_probs=27.0
Q ss_pred ceeEEEecCCCCceEEEEeCCCcEEEEeCCCCCCC
Q 014454 180 EGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKN 214 (424)
Q Consensus 180 ~v~~l~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~ 214 (424)
.+.+++..++.. ++++-+.|+++++|++.+++..
T Consensus 237 ~~~~~~~~~~~~-~lftl~~D~~LRiWsl~t~~~v 270 (950)
T 4gq2_M 237 TIISMIFLSTYN-VLVMLSLDYKLKVLDLSTNQCV 270 (950)
T ss_dssp CEEEEEEETTTT-EEEEEETTCEEEEEETTTTEEE
T ss_pred eEEEEeecCCCc-EEEEEECCCEEEEEECCCCCeE
Confidence 466777777555 7999999999999999887543
No 360
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=50.79 E-value=25 Score=36.93 Aligned_cols=33 Identities=15% Similarity=0.221 Sum_probs=26.7
Q ss_pred CcceEEeCCCCCcEEEEEeCCCcEEEEecCCccC
Q 014454 376 KISDFSWNPCEDWVISSVAEDNILQIWQMAENIY 409 (424)
Q Consensus 376 ~v~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~ 409 (424)
.+.+++..++.. ++++-+.|+++|||++.++.+
T Consensus 239 ~~vs~~~~~~~~-~lftL~~D~~LRiWsl~t~~~ 271 (1139)
T 4fhn_B 239 TIISMIFLSTYN-VLVMLSLDYKLKVLDLSTNQC 271 (1139)
T ss_dssp CBSCCEEETTTT-EEEEEBTTCEEEEEETTTTEE
T ss_pred eeEEeeccCCcc-EEEEEeCCCEEEEEECCCCCe
Confidence 455666777777 688889999999999999855
No 361
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=45.75 E-value=1.4e+02 Score=25.27 Aligned_cols=222 Identities=14% Similarity=0.140 Sum_probs=119.1
Q ss_pred ceeEEEecCCCCcEEEEEeCCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCceeEEEecCCCCceEEEEeCCCcEEEE
Q 014454 127 EVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDDAQICLW 206 (424)
Q Consensus 127 ~v~~~~~~p~~~~~latg~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~iw 206 (424)
.|..|+.-.. +.++. . ||.|+.|-....... ..+. .....|..++-... +.++. . ||.|..|
T Consensus 25 ~i~~ia~G~~--h~~~l-~-~G~v~~wG~n~~Gql------g~p~----~~~~~i~~ia~G~~--hs~~l-~-~G~v~~w 86 (282)
T 3qhy_B 25 GVDAIAGGYF--HGLAL-K-GGKVLGWGANLNGQL------TMPA----ATQSGVDAIAAGNY--HSLAL-K-DGEVIAW 86 (282)
T ss_dssp SCCEEEECSS--EEEEE-E-TTEEEEEECCSSSTT------SCCG----GGGSCCCEEEECSS--EEEEE-E-TTEEEEE
T ss_pred CCcEEEeCCC--eEEEE-E-CCEEEEEeCCCCCCC------CCCc----cCCCCEEEEEeCCC--EEEEE-E-CCEEEEe
Confidence 4556665442 23444 5 899999987652111 0111 11235666665432 22444 4 8999999
Q ss_pred eCCCCCCCCcccceeeeecCCccEeeEEEecCCCcEEEEEeCCCeEEEEEcCCCCCCCCeeeeeccCCCeeEEEecCCCC
Q 014454 207 DINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNE 286 (424)
Q Consensus 207 d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~ 286 (424)
-.+....... +. .-...|..++.... +.+ .-. +|.|+.|-........ + .......|..|+.....
T Consensus 87 G~n~~Gqlg~--P~----~~~~~v~~ia~G~~--hs~-al~-~G~v~~wG~n~~gqlg-~--~~~~~~~i~~i~~G~~~- 152 (282)
T 3qhy_B 87 GGNEDGQTTV--PA----EARSGVDAIAAGAW--ASY-ALK-DGKVIAWGDDSDGQTT-V--PAEAQSGVTALDGGVYT- 152 (282)
T ss_dssp ECCTTSTTCC--CG----GGSSSEEEEEEETT--EEE-EEE-TTEEEEEECCTTSTTS-C--CGGGGSSEEEEEECSSE-
T ss_pred eCCCCCCCCC--Cc----ccCCCeEEEECcCC--EEE-EEe-CCeEEEecCCCCCcCC-C--CccCCCCeEEEEcccCE-
Confidence 8765432211 10 11346777776644 233 345 9999999876533211 1 11223567777765432
Q ss_pred eEEEEEeCCCcEEEEECCCCCCcceEecCCCCCEEEEEEcCCCCcEEEEEECCCeEEEeeCCCCCcccCCCCcCCCCCee
Q 014454 287 WILATGSTDKTVKLFDLRKISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPEDAEDGPPEL 366 (424)
Q Consensus 287 ~~l~tg~~dg~i~iwd~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~ 366 (424)
.++. . ||.|..|-....++.-.... -...|..++..... .++. .||.|..|-.......-.. ..
T Consensus 153 -~~~l-~-~G~v~~wG~n~~gqlg~p~~-~~~~v~~i~~G~~h--s~al--~~G~v~~wG~n~~gqlg~p-------~~- 216 (282)
T 3qhy_B 153 -ALAV-K-NGGVIAWGDNYFGQTTVPAE-AQSGVDDVAGGIFH--SLAL--KDGKVIAWGDNRYKQTTVP-------TE- 216 (282)
T ss_dssp -EEEE-E-TTEEEEEECCTTSTTSCCGG-GGSSEEEEEECSSE--EEEE--ETTEEEEEECCTTSTTCCC-------GG-
T ss_pred -EEEE-E-CCEEEEecCCCCCCCCCcee-cCCCeEEEEecCCE--EEEE--ECCeEEEEECCCCCCCCCC-------cc-
Confidence 3333 3 79999998765433221111 13568888776544 3444 5999999977654322110 00
Q ss_pred eEEEcCCCCCcceEEeCCCCCcEEEEEeCCCcEEEEecCC
Q 014454 367 LFIHGGHTSKISDFSWNPCEDWVISSVAEDNILQIWQMAE 406 (424)
Q Consensus 367 ~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~vw~~~~ 406 (424)
....|..++-..... ++.. ||.|..|=...
T Consensus 217 ------~~~~v~~i~~G~~h~--~al~--~g~v~~wG~n~ 246 (282)
T 3qhy_B 217 ------ALSGVSAIASGEWYS--LALK--NGKVIAWGSSR 246 (282)
T ss_dssp ------GGSSCCEEEECSSCE--EEEE--TTEEEEESTTC
T ss_pred ------cCCCceEEEcCCCEE--EEEE--CCEEEEecCCC
Confidence 112466666654433 3333 88888886654
No 362
>3kci_A Probable E3 ubiquitin-protein ligase HERC2; WD40, RCC1, structural genomics consortium, SGC, coiled coil, metal-binding, phosphoprotein; 1.80A {Homo sapiens}
Probab=42.24 E-value=1.8e+02 Score=25.76 Aligned_cols=250 Identities=14% Similarity=0.063 Sum_probs=117.5
Q ss_pred EEEEEeCCCeEEEEeCCCCCCCCCCCCCCCCcE---EEec-CCCceeEEEecCCCCceEEEEeCCCcEEEEeCCCCCCC-
Q 014454 140 LIATKTVSAEVYVFDYSKHPSKPPLDGACSPDL---RLRG-HSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKN- 214 (424)
Q Consensus 140 ~latg~~dg~v~iw~~~~~~~~~~~~~~~~~~~---~~~~-h~~~v~~l~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~- 214 (424)
..+.-..+|.|+.|-......... +...... .+.. ....+..++.+. +..+.+.-..||.|..|-.+.....
T Consensus 64 ~~~~l~~~G~v~~wG~n~~GqLG~--g~~~~~~~p~~v~~~~~~~~~~v~i~~-G~~h~~al~~~G~v~~wG~n~~GqLG 140 (389)
T 3kci_A 64 TLFAVTADGKLYATGYGAGGRLGI--GGTESVSTPTLLESIQHVFIKKVAVNS-GGKHCLALSSEGEVYSWGEAEDGKLG 140 (389)
T ss_dssp EEEEEETTSCEEEEECCGGGTTSS--SSSCCEEEEEECGGGTTSCEEEEEECT-TCSEEEEEETTSCEEEEECCGGGTTC
T ss_pred eEEEEcCCCcEEEEECCCCCCCCC--CCcCCccCCEEcccccCCceeEEEECc-CCCeEEEEcCCCCEEEEeCCCCCcCC
Confidence 344446789999997654211000 0001011 1111 112333445544 3335666678999999965432111
Q ss_pred -----Ccccceeeeec-CCccEeeEEEecCCCcEEEEEeCCCeEEEEEcCCCCCC-----CCe---eee-eccCCCeeEE
Q 014454 215 -----KSLEAMQIFKV-HEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVS-----KPV---QSV-VAHQSEVNCL 279 (424)
Q Consensus 215 -----~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~~s~~~dg~i~i~d~~~~~~~-----~~~---~~~-~~~~~~v~~v 279 (424)
....+ ..+.. ....|..|+... .+ .++...+|.|+.|-....... ... ..+ ......|..+
T Consensus 141 ~g~~~~~~~p-~~v~~l~~~~i~~va~G~--~h-s~alt~~G~v~~wG~n~~GqLG~~~~~~~~~p~~v~~~~~~~v~~i 216 (389)
T 3kci_A 141 HGNRSPCDRP-RVIESLRGIEVVDVAAGG--AH-SACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDI 216 (389)
T ss_dssp SSSCCCEEEE-EECGGGTTSCEEEEEECS--SE-EEEEETTSCEEEEECCGGGTTCSSSCCCEEEEEECGGGTTSCEEEE
T ss_pred CCCCccCcCC-eEecccCCCeEEEEEeCc--Ce-EEEEeCCCeEEEeCCCCCCCcCCCCCcccccceEecccCCCeEEEE
Confidence 11111 11111 122566666543 22 345668999999975431110 000 011 1123356677
Q ss_pred EecCCCCeEEEEEeCCCcEEEEECCCCCCc----------ceEec-CCCCCEEEEEEcCCCCcEEEEEECCCeEEEeeCC
Q 014454 280 AFNPFNEWILATGSTDKTVKLFDLRKISTA----------LHTFD-SHKEEVFQVGWNPKNETILASCCLGRRLMVWDLS 348 (424)
Q Consensus 280 ~~~~~~~~~l~tg~~dg~i~iwd~~~~~~~----------~~~~~-~h~~~v~~~~~sp~~~~~l~s~~~dg~i~iwd~~ 348 (424)
+...... ..+.-..+|.|..|-....++. ...+. .....|..++.... ..++-..+|.|..|=..
T Consensus 217 a~G~g~~-~t~~l~~~G~v~~wG~n~~GqLG~g~~~~~~~p~~v~~~~~~~v~~v~~G~~---hs~alt~~G~v~~wG~n 292 (389)
T 3kci_A 217 ACGSGDA-QTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQ---FSVALTKSGAVYTWGKG 292 (389)
T ss_dssp EECCSSC-EEEEEETTTEEEEEECCGGGTTSSSSCCCEEEEEECGGGTTSCEEEEEEETT---EEEEEETTSCEEEEECC
T ss_pred EEcCCCc-EEEEEccCCEEEEEeCCCCCCCCCCCCCCccccEEecccCCCcEEEEeCCCC---EEEEEeCCCeEEEEeCC
Confidence 6643223 3445567899999975432211 11111 12235777776543 34455789999999765
Q ss_pred CCCcccCCCCcCCCCCeeeEEEcC-CCCCcceEEeCCCCCcEEEEEeCCCcEEEEecCC
Q 014454 349 RIDEEQTPEDAEDGPPELLFIHGG-HTSKISDFSWNPCEDWVISSVAEDNILQIWQMAE 406 (424)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~~~~~~-h~~~v~~~~~~~~~~~~l~s~~~dg~i~vw~~~~ 406 (424)
.....-.-.. . .......... ....|..++.... ..+....||.|..|=...
T Consensus 293 ~~GqLG~g~~--~-~~~~P~~v~~l~~~~v~~ia~G~~---h~~al~~~G~v~~wG~n~ 345 (389)
T 3kci_A 293 DYHRLGHGSD--D-HVRRPRQVQGLQGKKVIAIATGSL---HCVCCTEDGEVYTWGDND 345 (389)
T ss_dssp GGGTTCSSSC--C-CEEEEEECGGGTTCCEEEEEECSS---EEEEEETTCCEEEEECCT
T ss_pred CCCCCCCCCC--c-cccCCeEeccCCCCCEEEEEeccC---eEEEECCCCCEEEeeCCC
Confidence 4322110000 0 0000011111 1224556655433 233346789999997754
No 363
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=40.62 E-value=2.2e+02 Score=26.19 Aligned_cols=260 Identities=10% Similarity=0.072 Sum_probs=120.0
Q ss_pred CceeEEEecCCCC-cEEEEEeCCCeEEEEeCCCCCCCCCCCCCCCCcEEEe---------cCCCceeEEEecCC---CCc
Q 014454 126 GEVNRARYMPQNP-FLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLR---------GHSTEGYGLSWSKF---KEG 192 (424)
Q Consensus 126 ~~v~~~~~~p~~~-~~latg~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~---------~h~~~v~~l~~~~~---~~~ 192 (424)
.....|+|.|++. +++++ ...|.|++++...... ..++..+. ........|+++|+ +..
T Consensus 14 ~~P~~~a~~pdG~~rl~V~-er~G~i~~~~~~g~~~-------~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~f~~n~~ 85 (463)
T 2wg3_C 14 RQPVGALHSGDGSQRLFIL-EKEGYVKILTPEGEIF-------KEPYLDIHKLVQSGIKGGDERGLLSLAFHPNYKKNGK 85 (463)
T ss_dssp SSEEEEECCSSSSCCEEEE-ETTTEEEEECTTSCBC-------SSCSEECTTTBCCCCSSSCCCSEEEEEECTTHHHHCE
T ss_pred CCceEEEECCCCCeEEEEE-eCCceEEEEeCCCCee-------eeeecCCcceeccCccccCCCcceeeEeCCCCcCCCE
Confidence 4567899999985 35554 6789999997543110 11111111 12356789999996 221
Q ss_pred eEEEEeC--C----------CcEEEEeCCCCC--CC--Ccccceeeee--cCCccEeeEEEecCCCcEEEEEeCC-----
Q 014454 193 HLLSGSD--D----------AQICLWDINAAP--KN--KSLEAMQIFK--VHEGVVEDVAWHLRHEYLFGSVGDD----- 249 (424)
Q Consensus 193 ~l~s~~~--d----------g~i~iwd~~~~~--~~--~~~~~~~~~~--~~~~~v~~~~~~~~~~~~~~s~~~d----- 249 (424)
+.++-+. + ..|.-|.+.... .. ...+.+..+. ........|+|.|++. |+++.+..
T Consensus 86 lYv~yt~~~~~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~g~~l~fgpDG~-LYv~~Gd~~~~~~ 164 (463)
T 2wg3_C 86 LYVSYTTNQERWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKHLGGQLLFGPDGF-LYIILGDGMITLD 164 (463)
T ss_dssp EEEEEEECCCSSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSSCEEEEEECTTSC-EEEEECCTTCCHH
T ss_pred EEEEEeCCCCCcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCcccCCcEeECCCCc-EEEEeCCCCCCCC
Confidence 2232221 1 134446664321 10 1111111111 1122467899999985 55555443
Q ss_pred ------------CeEEEEEcCCC------CCC-----------CCeeeeeccCCCeeEEEecCC-----CCeEEEEEeCC
Q 014454 250 ------------QYLLIWDLRTP------SVS-----------KPVQSVVAHQSEVNCLAFNPF-----NEWILATGSTD 295 (424)
Q Consensus 250 ------------g~i~i~d~~~~------~~~-----------~~~~~~~~~~~~v~~v~~~~~-----~~~~l~tg~~d 295 (424)
|.|.-.|.... ... .+..-..+|.. ...++|+|. |...+..+...
T Consensus 165 ~~~~~q~~~~~~GkIlRi~~dg~~~~~~y~iP~dNPf~~~~~~~~eI~a~G~RN-p~gla~dp~tg~~~G~l~~~~~D~~ 243 (463)
T 2wg3_C 165 DMEEMDGLSDFTGSVLRLDVDTDMCNVPYSIPRSNPHFNSTNQPPEVFAHGLHD-PGRCAVDRHPTDININLTILCSDSN 243 (463)
T ss_dssp HHHHCTTCCSCTTEEEEEBCCCCCSSCSCBCCTTSTTTTCSSSCTTEEEECCSS-CCBEEEESSCSSTTCSEEEEEECC-
T ss_pred ccccccCcCCCCeeEEEEECCCCcccccCcCCCCCCCcCCCCCcccEEEECCCC-cceEEECCCCCCcccceEEEecccC
Confidence 23433444331 000 00011123333 457889986 33123333221
Q ss_pred C----cEEEEECCCC-----CCcceEecCCC-CCEEEEEEcCCC------CcEEEEEECCCeEEEeeCCCCCcccCCCCc
Q 014454 296 K----TVKLFDLRKI-----STALHTFDSHK-EEVFQVGWNPKN------ETILASCCLGRRLMVWDLSRIDEEQTPEDA 359 (424)
Q Consensus 296 g----~i~iwd~~~~-----~~~~~~~~~h~-~~v~~~~~sp~~------~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~ 359 (424)
| .-.|..+... ..|+..+..|. .+++.+.|-... ..+| .+...+.|....+.......
T Consensus 244 G~~~~~~ei~~i~~G~~yG~~~P~~~~~~~~g~Ap~G~~~Y~G~~fP~~~g~~f-~~~~~g~i~~~~~~~~~~~~----- 317 (463)
T 2wg3_C 244 GKNRSSARILQIIKGKDYESEPSLLEFKPFSNGPLVGGFVYRGCQSERLYGSYV-FGDRNGNFLTLQQSPVTKQW----- 317 (463)
T ss_dssp -----CEEEEEEC----CCSCCCCEECCC----CEEEEEECCCSSCTTTTTCEE-EEETTSCEEEEEC-----CC-----
T ss_pred CCCCCCCeEeeeccCCCCCCCCCeEEeeCCCCccccceEEEeCCCChhhcceEE-EecCCCcEEEEEeCCCCcee-----
Confidence 2 1234433321 14666665442 578888885421 1234 44445665555544321100
Q ss_pred CCCCCeeeEEE------cCCCCCcceEEeCCCCCcEEEEEeC-C----CcEEEEecC
Q 014454 360 EDGPPELLFIH------GGHTSKISDFSWNPCEDWVISSVAE-D----NILQIWQMA 405 (424)
Q Consensus 360 ~~~~~~~~~~~------~~h~~~v~~~~~~~~~~~~l~s~~~-d----g~i~vw~~~ 405 (424)
....+..- ..-...+.++...|+|. |+++... + ..=+||++.
T Consensus 318 ---~~~~~~~g~~~~~~~~~~~r~~~v~~~pdG~-Lyv~~~~~~~~~~~~G~I~Ri~ 370 (463)
T 2wg3_C 318 ---QEKPLCLGTSGSCRGYFSGHILGFGEDELGE-VYILSSSKSMTQTHNGKLYKIV 370 (463)
T ss_dssp ---EEEEECEEETTSSCSCCCSEEEEEEECTTCC-EEEEEESSCGGGCSSEEEEEEE
T ss_pred ---eEEEeecCCcccccccccCcceEEEECCCCC-EEEEeccCCcccCCCCcEEEec
Confidence 00111000 11234689999999999 5555441 0 234667765
No 364
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=40.56 E-value=65 Score=31.63 Aligned_cols=33 Identities=15% Similarity=0.181 Sum_probs=24.9
Q ss_pred CCEEEEEEcCCCCcEEEEEECCCeEEEeeCCCCCcc
Q 014454 318 EEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEE 353 (424)
Q Consensus 318 ~~v~~~~~sp~~~~~l~s~~~dg~i~iwd~~~~~~~ 353 (424)
..|.++.+. . .++++-+.|.++|+|+++++...
T Consensus 222 ~~Is~~~~~--~-~fLftL~~Dh~LRiWsL~t~~lv 254 (729)
T 3f7f_A 222 SVISCKLFH--E-RYLIVLTQNCHLKIWDLTSFTLI 254 (729)
T ss_dssp CEEEEEEET--T-TEEEEEETTCEEEEEETTTTEEE
T ss_pred ceEEEeccC--C-cEEEEEEcCCeEEEEEcCCCceE
Confidence 345555553 3 48999999999999999987643
No 365
>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}
Probab=39.01 E-value=2.9e+02 Score=27.13 Aligned_cols=210 Identities=12% Similarity=0.114 Sum_probs=101.3
Q ss_pred eEEE-ecCCCCceEEEEeCCC----cEEEEeCCCCCCCC-cccceeeeecCC-----ccEeeEEEecCCCcEEEEE----
Q 014454 182 YGLS-WSKFKEGHLLSGSDDA----QICLWDINAAPKNK-SLEAMQIFKVHE-----GVVEDVAWHLRHEYLFGSV---- 246 (424)
Q Consensus 182 ~~l~-~~~~~~~~l~s~~~dg----~i~iwd~~~~~~~~-~~~~~~~~~~~~-----~~v~~~~~~~~~~~~~~s~---- 246 (424)
..+. ++|++...+++-|..| .++++|+.+++... .+.+ .... .....++|... ..++++.
T Consensus 132 ~g~~~~~~~~~~~~~~ls~~G~d~~~~~~~d~~t~~~~~~~~~~----~~k~~~~~~~~~~~~~W~d~-~~~~~~~~~~~ 206 (711)
T 4hvt_A 132 RGVSNCFQNPNRYLISMSFGGKDEMFFREWDLEKKDFVKNGFEP----ITNSGKLLEGKFTYPTWINK-DTIIFNLVLHK 206 (711)
T ss_dssp EEEEECSSSTTEEEEEEEETTCSEEEEEEEETTTTEECTTCSCC----BCTTCCBCCEETCCEEEEET-TEEEECCCCST
T ss_pred eceeecCCCCCEEEEEeCCCCCceeEEEEEECCcCCcCCCCccc----ccccccccccccceeeEECC-CEEEEEeCCCC
Confidence 3444 7788875555544444 59999998874321 1110 0000 11234477643 3455332
Q ss_pred ------eCCCeEEEEEcCCCCCCCCeeeeeccCCCe-eEEEecCCCCe----EEEEEeCC---CcEEEEECCCCCCcceE
Q 014454 247 ------GDDQYLLIWDLRTPSVSKPVQSVVAHQSEV-NCLAFNPFNEW----ILATGSTD---KTVKLFDLRKISTALHT 312 (424)
Q Consensus 247 ------~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v-~~v~~~~~~~~----~l~tg~~d---g~i~iwd~~~~~~~~~~ 312 (424)
+....|+.|.+-+... .....+......+ .....++++.+ ++++.+.+ ..+.+.|...+...+..
T Consensus 207 ~~~~~~~~~~~v~~~~~Gt~~~-~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (711)
T 4hvt_A 207 NEITSSLYPNSLYIWKRGESIE-KAKKLFEVPKEYIYVSAGKLLSDTISSSLIFISANKDFYNYDNYILDTKYKNLKLQK 285 (711)
T ss_dssp TCBCTTSSBCEEEEEETTSCGG-GCEEEEECCTTSCEEEEEESSCTTTCSSEEEEEEESSSSCEEEEEEECSSSSCEEEE
T ss_pred CCcCcCCCCCEEEEEECCCChH-HCeEEeccCCCceEEEEEEecCCCceEEEEEEEEecccCceeEEEEcCCCCCCcceE
Confidence 1235688888766532 1222333333333 23445566653 45554422 45667776543233333
Q ss_pred ecCCCCCEEEEEEcCCCCcEEEEE----------ECCCeEEEeeCCCCCcccCCCCcCCCCCeeeEEEcCCCCCcceEEe
Q 014454 313 FDSHKEEVFQVGWNPKNETILASC----------CLGRRLMVWDLSRIDEEQTPEDAEDGPPELLFIHGGHTSKISDFSW 382 (424)
Q Consensus 313 ~~~h~~~v~~~~~sp~~~~~l~s~----------~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~ 382 (424)
+...... .+..+..+ .+++.. ...+.|.+.++....... ......+.+.... ....+.++.|
T Consensus 286 l~~~~~~--~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~----~~~~~~~~~~~~~-~~~~l~~~~~ 357 (711)
T 4hvt_A 286 INMPSDA--TLQGSFKE-YVFWLLRSDWKFKSHNIKAGSLVALHFTDLLKTE----SDKTSLKILFTPT-ANEVFNFIST 357 (711)
T ss_dssp CCSCTTC--EEEEEETT-EEEEECSSCEEETTEEECTTCEEEEEGGGGGSCG----GGCTTCEEEECCC-TTEEEEEEEE
T ss_pred eecCCcc--eEeeeECC-EEEEEECcccccccccCCCCeEEEEECCcccccc----cccccceEEECCC-CCCeEEEEEE
Confidence 4332322 23344444 344422 235678888876532100 0000012222222 2335778888
Q ss_pred CCCCCcEEEEEeCCCc--EEEEecCCc
Q 014454 383 NPCEDWVISSVAEDNI--LQIWQMAEN 407 (424)
Q Consensus 383 ~~~~~~~l~s~~~dg~--i~vw~~~~~ 407 (424)
..+ +++++...++. |.++++.++
T Consensus 358 ~~~--~l~~~~~~~~~~~l~~~~~~~g 382 (711)
T 4hvt_A 358 TKD--RVFLATYDNVVAKVVTFTLENE 382 (711)
T ss_dssp CSS--CEEEEEEETTEEEEEEECEETT
T ss_pred ECC--EEEEEEEECCEEEEEEEECCCC
Confidence 865 37778777775 566766554
No 366
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=34.11 E-value=3.2e+02 Score=26.14 Aligned_cols=59 Identities=14% Similarity=0.162 Sum_probs=35.3
Q ss_pred eeEEEecCCCCeEEEEEeCC------------CcEEEEECCCCCCcceEecC-CCCCEEEEEEcCCCCcEEEEE
Q 014454 276 VNCLAFNPFNEWILATGSTD------------KTVKLFDLRKISTALHTFDS-HKEEVFQVGWNPKNETILASC 336 (424)
Q Consensus 276 v~~v~~~~~~~~~l~tg~~d------------g~i~iwd~~~~~~~~~~~~~-h~~~v~~~~~sp~~~~~l~s~ 336 (424)
.-.|+|+|.|. |++.-..+ ..+.+.+..+ ++....+.. -...++.++|+|+++.+++..
T Consensus 478 PDNL~fd~~G~-LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~-g~~~rf~~~P~gaE~TG~~fspDg~tlfvni 549 (592)
T 3zwu_A 478 PDGLGFDKAGR-LWILTDGDSSNAGDFAGMGNNQMLCADPAT-GEIRRFMVGPIGCEVTGISFSPDQKTLFVGI 549 (592)
T ss_dssp EEEEEECTTCC-EEEEECCCCCCSGGGTTTCSCEEEEECTTT-CCEEEEEECCTTCEEEEEEECTTSSEEEEEE
T ss_pred CcceEECCCCC-EEEEecCCCcccccccccccceEEEEeCCC-CeEEEEEeCCCCccCcCeeECCCCCEEEEEE
Confidence 45689999987 45443322 1244444443 343333333 346899999999998766543
No 367
>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}
Probab=33.85 E-value=3.5e+02 Score=26.55 Aligned_cols=246 Identities=11% Similarity=0.107 Sum_probs=116.5
Q ss_pred eEEE-ecCCCCcEEEEEeCC----CeEEEEeCCCCCCCCCCCCCCCCcEEEecCC-----CceeEEEecCCCCceEEEE-
Q 014454 129 NRAR-YMPQNPFLIATKTVS----AEVYVFDYSKHPSKPPLDGACSPDLRLRGHS-----TEGYGLSWSKFKEGHLLSG- 197 (424)
Q Consensus 129 ~~~~-~~p~~~~~latg~~d----g~v~iw~~~~~~~~~~~~~~~~~~~~~~~h~-----~~v~~l~~~~~~~~~l~s~- 197 (424)
..+. ++|++..++++-+.. ..++++|+.+..--.. ...+. ... .....++|.. +..++++.
T Consensus 132 ~g~~~~~~~~~~~~~~ls~~G~d~~~~~~~d~~t~~~~~~---~~~~~----~k~~~~~~~~~~~~~W~d-~~~~~~~~~ 203 (711)
T 4hvt_A 132 RGVSNCFQNPNRYLISMSFGGKDEMFFREWDLEKKDFVKN---GFEPI----TNSGKLLEGKFTYPTWIN-KDTIIFNLV 203 (711)
T ss_dssp EEEEECSSSTTEEEEEEEETTCSEEEEEEEETTTTEECTT---CSCCB----CTTCCBCCEETCCEEEEE-TTEEEECCC
T ss_pred eceeecCCCCCEEEEEeCCCCCceeEEEEEECCcCCcCCC---Ccccc----cccccccccccceeeEEC-CCEEEEEeC
Confidence 3444 788888666654443 3899999987211100 00000 000 0113447763 34344432
Q ss_pred ---------eCCCcEEEEeCCCCCCCCcccceeeeecCCccE-eeEEEecCCCc----EEEEEeCC---CeEEEEEcCCC
Q 014454 198 ---------SDDAQICLWDINAAPKNKSLEAMQIFKVHEGVV-EDVAWHLRHEY----LFGSVGDD---QYLLIWDLRTP 260 (424)
Q Consensus 198 ---------~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v-~~~~~~~~~~~----~~~s~~~d---g~i~i~d~~~~ 260 (424)
+.-..|+.|.+.+.... ....+.+....+ .....++++.. ++++.+.+ ..+.+.|...+
T Consensus 204 ~~~~~~~~~~~~~~v~~~~~Gt~~~~----~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 279 (711)
T 4hvt_A 204 LHKNEITSSLYPNSLYIWKRGESIEK----AKKLFEVPKEYIYVSAGKLLSDTISSSLIFISANKDFYNYDNYILDTKYK 279 (711)
T ss_dssp CSTTCBCTTSSBCEEEEEETTSCGGG----CEEEEECCTTSCEEEEEESSCTTTCSSEEEEEEESSSSCEEEEEEECSSS
T ss_pred CCCCCcCcCCCCCEEEEEECCCChHH----CeEEeccCCCceEEEEEEecCCCceEEEEEEEEecccCceeEEEEcCCCC
Confidence 12356888888665321 122333322222 23444556553 45454422 44666666542
Q ss_pred CCCCCeeeeeccCCCeeEEEecCCCCeEEEEE----------eCCCcEEEEECCCCC------CcceE-ecC-CCCCEEE
Q 014454 261 SVSKPVQSVVAHQSEVNCLAFNPFNEWILATG----------STDKTVKLFDLRKIS------TALHT-FDS-HKEEVFQ 322 (424)
Q Consensus 261 ~~~~~~~~~~~~~~~v~~v~~~~~~~~~l~tg----------~~dg~i~iwd~~~~~------~~~~~-~~~-h~~~v~~ 322 (424)
.. .+..+..... ..+..+..+. +++.. ...+.|...|+.... ..... +.. ....+..
T Consensus 280 ~~--~~~~l~~~~~--~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 354 (711)
T 4hvt_A 280 NL--KLQKINMPSD--ATLQGSFKEY-VFWLLRSDWKFKSHNIKAGSLVALHFTDLLKTESDKTSLKILFTPTANEVFNF 354 (711)
T ss_dssp SC--EEEECCSCTT--CEEEEEETTE-EEEECSSCEEETTEEECTTCEEEEEGGGGGSCGGGCTTCEEEECCCTTEEEEE
T ss_pred CC--cceEeecCCc--ceEeeeECCE-EEEEECcccccccccCCCCeEEEEECCcccccccccccceEEECCCCCCeEEE
Confidence 21 1222222111 1122333343 44422 246789999987631 12233 222 2346778
Q ss_pred EEEcCCCCcEEEEEECCCe--EEEeeCCCCC-cccCCCCcCCCCCeeeEEEcCCCCCcceEEeCCCCCcEEEEEeC---C
Q 014454 323 VGWNPKNETILASCCLGRR--LMVWDLSRID-EEQTPEDAEDGPPELLFIHGGHTSKISDFSWNPCEDWVISSVAE---D 396 (424)
Q Consensus 323 ~~~sp~~~~~l~s~~~dg~--i~iwd~~~~~-~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~---d 396 (424)
+.|..+ .++++...++. +.++++..+. .. ..+..+.. .+.+..+...+++..++++.+. -
T Consensus 355 ~~~~~~--~l~~~~~~~~~~~l~~~~~~~g~~~~-----------~~~i~lp~-~~~~~~~~~~~~~~~~~~~~ss~~~P 420 (711)
T 4hvt_A 355 ISTTKD--RVFLATYDNVVAKVVTFTLENEQWTK-----------PVVLKLPY-QNAIFGMSSYEEEEEALITIENSIVP 420 (711)
T ss_dssp EEECSS--CEEEEEEETTEEEEEEECEETTEECC-----------CEEECCCS-TTCEEEEECCTTCSCEEEEEECSSSC
T ss_pred EEEECC--EEEEEEEECCEEEEEEEECCCCceEE-----------EeccCCCC-CeEEEEEeecCcCCEEEEEEecCCCC
Confidence 888875 47888888875 5566654321 00 00011111 1235555666666555555442 3
Q ss_pred CcEEEEecC
Q 014454 397 NILQIWQMA 405 (424)
Q Consensus 397 g~i~vw~~~ 405 (424)
+.+..+++.
T Consensus 421 ~~~~~~d~~ 429 (711)
T 4hvt_A 421 PTIYLWVKT 429 (711)
T ss_dssp CEEEEECTT
T ss_pred CEEEEEeCC
Confidence 456666654
No 368
>3a0f_A Xyloglucanase; beta-propeller, hydrolase; 2.50A {Geotrichum SP}
Probab=31.24 E-value=4e+02 Score=26.36 Aligned_cols=158 Identities=18% Similarity=0.102 Sum_probs=76.6
Q ss_pred CCCceeEEEecCCCCceEEEEeCCCcEEEEeCCCCCCCCcccceee-ee----c----CCccEeeEEEecCCC-cEEEEE
Q 014454 177 HSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQI-FK----V----HEGVVEDVAWHLRHE-YLFGSV 246 (424)
Q Consensus 177 h~~~v~~l~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~-~~----~----~~~~v~~~~~~~~~~-~~~~s~ 246 (424)
-.+.|.+|.++|.++..++++...|.|... ..+. .+...+.. .. + ....+.+|+++|.++ .+++..
T Consensus 19 ~~g~i~~i~~~p~~~~~~y~~~~~ggv~~S--~DgG--~tW~~~~~~~~~~~~~~~~~~~~~~~~ia~dp~~~~~~~~~~ 94 (763)
T 3a0f_A 19 GGGFISGLVAHPTEKDLIYARTDIGGTYRW--NAAK--WEWEPITDFIINNALAGNGANLLGTESIALDPHNPDRLYLAQ 94 (763)
T ss_dssp BCSCEEEEEECSSSTTCEEEEESSSCEEEE--ETTT--TEEEESCTTCBTTCSSSCCCCCCSEEEEECCTTCTTCEEEEE
T ss_pred CCCceeEEEeCCCCCCEEEEEeccCcEEEE--CCCC--CCeeECccCccccccCCCcccccceeEEEECCCCCCEEEEEe
Confidence 456799999999987778887766655433 2221 22222111 10 0 124589999998543 444433
Q ss_pred eC----CCeEEEEE-cCCCCCCCCeeeeecc----CC--CeeEEEecCCCCeEEEEEeCCCcEEEEECCCCCCcceEecC
Q 014454 247 GD----DQYLLIWD-LRTPSVSKPVQSVVAH----QS--EVNCLAFNPFNEWILATGSTDKTVKLFDLRKISTALHTFDS 315 (424)
Q Consensus 247 ~~----dg~i~i~d-~~~~~~~~~~~~~~~~----~~--~v~~v~~~~~~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~~ 315 (424)
+. .....||- ...++..+.+...... .. ....++++|.....+.++...+. ||--...++--..+..
T Consensus 95 g~~~~~~~~~~i~~S~DgG~TW~~~~~~~~~~~~~~g~~~~~~l~v~p~~~~~v~a~~~~~~--l~~S~DgG~TW~~~~~ 172 (763)
T 3a0f_A 95 GDYVQWDPWAAFLVSDDRGKTFKQYRSPVPMGANDMGRNGGERLAVNPHWTDELWFGSRTQG--LWRSTDRAQTWSRMNQ 172 (763)
T ss_dssp CSCTTTCSCCEEEEESSTTSSCEEEECSSCCCTTSTTTTSBCCEEECTTSTTCEEEECSSSC--EEEESSTTSSCEECTT
T ss_pred cccccCCCCceEEEECCCCCCceeccCCcccCccccCccccceEEECCCCCCEEEEEeCCCc--EEEECCCCcCcccccc
Confidence 31 11133343 3334432222210000 11 12468888765434555554433 3333332332222221
Q ss_pred ------CCCCEEEEEEcCCCCcEEEEEECCC
Q 014454 316 ------HKEEVFQVGWNPKNETILASCCLGR 340 (424)
Q Consensus 316 ------h~~~v~~~~~sp~~~~~l~s~~~dg 340 (424)
....+..|+++|..+..++.+..++
T Consensus 173 ~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~ 203 (763)
T 3a0f_A 173 LPDSSTYGIGIISVIFDPKNVGTAYVASHAV 203 (763)
T ss_dssp SCCCSCTTTCEEEEEECSSSTTCEEEEESST
T ss_pred CcccCCCccceEEEEECCCCCCEEEEEEeCC
Confidence 1235788999986544455555544
No 369
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=26.91 E-value=3e+02 Score=26.26 Aligned_cols=64 Identities=11% Similarity=0.108 Sum_probs=38.6
Q ss_pred CeeEEEecCCCCeEEEEEeC------------CCcEEEEECCCCCCcceEecCC-CCCEEEEEEcCCCCcEEEEEECCC
Q 014454 275 EVNCLAFNPFNEWILATGST------------DKTVKLFDLRKISTALHTFDSH-KEEVFQVGWNPKNETILASCCLGR 340 (424)
Q Consensus 275 ~v~~v~~~~~~~~~l~tg~~------------dg~i~iwd~~~~~~~~~~~~~h-~~~v~~~~~sp~~~~~l~s~~~dg 340 (424)
....|.|+++|. |.++... ...|..++..+ ++....+... ...++.++|+|+++.++++...-|
T Consensus 477 sPDnL~fd~~G~-LWf~TD~~~~~~g~~~~~gnn~v~~~dp~t-Gel~~fl~~P~~aEpnGiafSPD~ktLfV~vQHPG 553 (592)
T 4a9v_A 477 SPDGLGFDKAGR-LWILTDGDSSNAGDFAGMGNNQMLCADPAT-GEIRRFMVGPIGCEVTGISFSPDQKTLFVGIQHPG 553 (592)
T ss_dssp CEEEEEECTTCC-EEEEECCCCCCSGGGTTCCSCEEEEECTTT-CCEEEEEECCTTCEEEEEEECTTSSEEEEEEESTT
T ss_pred CCCceEECCCCC-EEEEeCCCcCccccccccCCceEEEEeCCC-CeEEEEEeCCCCccccCCEECCCCCEEEEEEeCCC
Confidence 456789999987 4442221 11455565544 4443333332 357899999999987666654433
No 370
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=25.39 E-value=2.8e+02 Score=26.50 Aligned_cols=20 Identities=10% Similarity=0.351 Sum_probs=16.3
Q ss_pred CCCcceEEeCCCCCcEEEEE
Q 014454 374 TSKISDFSWNPCEDWVISSV 393 (424)
Q Consensus 374 ~~~v~~~~~~~~~~~~l~s~ 393 (424)
...++.++|+|+++.|++..
T Consensus 530 gaE~TG~~fspDg~tlfvni 549 (592)
T 3zwu_A 530 GCEVTGISFSPDQKTLFVGI 549 (592)
T ss_dssp TCEEEEEEECTTSSEEEEEE
T ss_pred CccCcCeeECCCCCEEEEEE
Confidence 45799999999999777664
No 371
>1ukf_A Avirulence protein AVRPPH3; AVRPPHB, hypersensitive response, hydrolase; 1.35A {Pseudomonas syringae PV} SCOP: d.3.1.10
Probab=23.31 E-value=49 Score=25.96 Aligned_cols=38 Identities=5% Similarity=0.214 Sum_probs=29.1
Q ss_pred CCCcceEEeCCCCCcEEEEEeCCCcEEEEecCCccCCC
Q 014454 374 TSKISDFSWNPCEDWVISSVAEDNILQIWQMAENIYHD 411 (424)
Q Consensus 374 ~~~v~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~~~ 411 (424)
...+.++.|...+...|++.+.+|.+.++|++-|.+.-
T Consensus 118 ~~hllsl~f~~g~aHaia~S~~g~~~tlFDPN~GEF~v 155 (188)
T 1ukf_A 118 RKHLLSLRFANVQGHAIACSCEGSQFKLFDPNLGEFQS 155 (188)
T ss_dssp CEEEEEEEETTTEEEEEEEEEETTEEEEEETTTEEEEE
T ss_pred CceEEEEEecCCCceeEEeccCCCeEEEeCCCCceeec
Confidence 34466677776665678888889999999999987753
No 372
>3kci_A Probable E3 ubiquitin-protein ligase HERC2; WD40, RCC1, structural genomics consortium, SGC, coiled coil, metal-binding, phosphoprotein; 1.80A {Homo sapiens}
Probab=22.47 E-value=4e+02 Score=23.48 Aligned_cols=211 Identities=10% Similarity=0.068 Sum_probs=103.3
Q ss_pred ceeEEEecCCCCcEEEEEeCCCeEEEEeCCCCCCCCCCCCCCCCcE---EEec-CCCceeEEEecCCCCceEEEEeCCCc
Q 014454 127 EVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDL---RLRG-HSTEGYGLSWSKFKEGHLLSGSDDAQ 202 (424)
Q Consensus 127 ~v~~~~~~p~~~~~latg~~dg~v~iw~~~~~~~~~~~~~~~~~~~---~~~~-h~~~v~~l~~~~~~~~~l~s~~~dg~ 202 (424)
.+..++.+.-.. ..+.-..+|.|+.|-......... ....... .+.. ....|..++- +....+.-..+|.
T Consensus 106 ~~~~v~i~~G~~-h~~al~~~G~v~~wG~n~~GqLG~--g~~~~~~~p~~v~~l~~~~i~~va~---G~~hs~alt~~G~ 179 (389)
T 3kci_A 106 FIKKVAVNSGGK-HCLALSSEGEVYSWGEAEDGKLGH--GNRSPCDRPRVIESLRGIEVVDVAA---GGAHSACVTAAGD 179 (389)
T ss_dssp CEEEEEECTTCS-EEEEEETTSCEEEEECCGGGTTCS--SSCCCEEEEEECGGGTTSCEEEEEE---CSSEEEEEETTSC
T ss_pred ceeEEEECcCCC-eEEEEcCCCCEEEEeCCCCCcCCC--CCCccCcCCeEecccCCCeEEEEEe---CcCeEEEEeCCCe
Confidence 344455555343 444457899999997654211000 0001011 1111 1224555654 3335666678999
Q ss_pred EEEEeCCCCCC------CCcccceeeeecCCccEeeEEEecCCCcEEEEEeCCCeEEEEEcCCCCCC-----CCe---ee
Q 014454 203 ICLWDINAAPK------NKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVS-----KPV---QS 268 (424)
Q Consensus 203 i~iwd~~~~~~------~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~dg~i~i~d~~~~~~~-----~~~---~~ 268 (424)
|..|-.+.... .....+..........|..++......+. ++...||.|..|-....... ... ..
T Consensus 180 v~~wG~n~~GqLG~~~~~~~~~p~~v~~~~~~~v~~ia~G~g~~~t-~~l~~~G~v~~wG~n~~GqLG~g~~~~~~~p~~ 258 (389)
T 3kci_A 180 LYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQT-LCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMK 258 (389)
T ss_dssp EEEEECCGGGTTCSSSCCCEEEEEECGGGTTSCEEEEEECCSSCEE-EEEETTTEEEEEECCGGGTTSSSSCCCEEEEEE
T ss_pred EEEeCCCCCCCcCCCCCcccccceEecccCCCeEEEEEEcCCCcEE-EEEccCCEEEEEeCCCCCCCCCCCCCCccccEE
Confidence 99997543211 11111111111123356666654322333 35678999999965431110 000 11
Q ss_pred eec-cCCCeeEEEecCCCCeEEEEEeCCCcEEEEECCCCCCc----------ceEec-CCCCCEEEEEEcCCCCcEEEEE
Q 014454 269 VVA-HQSEVNCLAFNPFNEWILATGSTDKTVKLFDLRKISTA----------LHTFD-SHKEEVFQVGWNPKNETILASC 336 (424)
Q Consensus 269 ~~~-~~~~v~~v~~~~~~~~~l~tg~~dg~i~iwd~~~~~~~----------~~~~~-~h~~~v~~~~~sp~~~~~l~s~ 336 (424)
+.. ....|..|+.... ..++-..+|.|+.|-....++. ...+. .....|..++.... ..++.
T Consensus 259 v~~~~~~~v~~v~~G~~---hs~alt~~G~v~~wG~n~~GqLG~g~~~~~~~P~~v~~l~~~~v~~ia~G~~---h~~al 332 (389)
T 3kci_A 259 IDSLTGLGVVKVECGSQ---FSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSL---HCVCC 332 (389)
T ss_dssp CGGGTTSCEEEEEEETT---EEEEEETTSCEEEEECCGGGTTCSSSCCCEEEEEECGGGTTCCEEEEEECSS---EEEEE
T ss_pred ecccCCCcEEEEeCCCC---EEEEEeCCCeEEEEeCCCCCCCCCCCCccccCCeEeccCCCCCEEEEEeccC---eEEEE
Confidence 111 1224666665432 2334467899999976432211 11111 12245777766443 34556
Q ss_pred ECCCeEEEeeCCCC
Q 014454 337 CLGRRLMVWDLSRI 350 (424)
Q Consensus 337 ~~dg~i~iwd~~~~ 350 (424)
..||.|..|=....
T Consensus 333 ~~~G~v~~wG~n~~ 346 (389)
T 3kci_A 333 TEDGEVYTWGDNDE 346 (389)
T ss_dssp ETTCCEEEEECCTT
T ss_pred CCCCCEEEeeCCCC
Confidence 78999999987654
No 373
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=22.36 E-value=4.7e+02 Score=24.93 Aligned_cols=21 Identities=10% Similarity=0.355 Sum_probs=17.0
Q ss_pred CCcceEEeCCCCCcEEEEEeC
Q 014454 375 SKISDFSWNPCEDWVISSVAE 395 (424)
Q Consensus 375 ~~v~~~~~~~~~~~~l~s~~~ 395 (424)
..++.++|+||++.|+++.-.
T Consensus 531 aEpnGiafSPD~ktLfV~vQH 551 (592)
T 4a9v_A 531 CEVTGISFSPDQKTLFVGIQH 551 (592)
T ss_dssp CEEEEEEECTTSSEEEEEEES
T ss_pred ccccCCEECCCCCEEEEEEeC
Confidence 468999999999977777643
No 374
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=21.91 E-value=4.3e+02 Score=23.56 Aligned_cols=156 Identities=10% Similarity=0.033 Sum_probs=78.8
Q ss_pred ceeEEEec---CC---CCceEEEEe-CCCcEEEEeCCCCCCCCcc----cce--ee--eecC----CccEeeEEEecC--
Q 014454 180 EGYGLSWS---KF---KEGHLLSGS-DDAQICLWDINAAPKNKSL----EAM--QI--FKVH----EGVVEDVAWHLR-- 238 (424)
Q Consensus 180 ~v~~l~~~---~~---~~~~l~s~~-~dg~i~iwd~~~~~~~~~~----~~~--~~--~~~~----~~~v~~~~~~~~-- 238 (424)
-+..+.+. |. +..+++.+. ..+-|.|+|+.+++.-+.. .+- .. ..+. ...+..|+.+|+
T Consensus 153 ~l~di~VD~~~~~~~c~~~~aYItD~~~~gLIVydl~~~~swRv~~~~~~pd~~~~~~i~G~~~~~~~Gi~gIaLsp~~~ 232 (381)
T 3q6k_A 153 YFGGFAVDVANPKGDCSETFVYITNFLRGALFIYDHKKQDSWNVTHPTFKAERPTKFDYGGKEYEFKAGIFGITLGDRDS 232 (381)
T ss_dssp GEEEEEEEESCTTTTSCSEEEEEEETTTTEEEEEETTTTEEEEEECGGGSCCSCEEEEETTEEEEECCCEEEEEECCCCT
T ss_pred ccceEEEecccCCCCCCccEEEEEcCCCCcEEEEECCCCcEEEEccCCCccccCcceEECCEEeEeccCceEEEecCCcC
Confidence 46667766 22 133444444 4678999999876431111 000 00 1111 246888999987
Q ss_pred --CCcEEEEEeCCCeEEEEE---cCCCCCCCCeeeeecc--CCCeeEEEecCCCCeEEEEEeCCCcEEEEECCC-CC--C
Q 014454 239 --HEYLFGSVGDDQYLLIWD---LRTPSVSKPVQSVVAH--QSEVNCLAFNPFNEWILATGSTDKTVKLFDLRK-IS--T 308 (424)
Q Consensus 239 --~~~~~~s~~~dg~i~i~d---~~~~~~~~~~~~~~~~--~~~v~~v~~~~~~~~~l~tg~~dg~i~iwd~~~-~~--~ 308 (424)
++.++...-....+.-.. ++.......+..+... ......++.++....++++--....|..|+..+ .- .
T Consensus 233 ~~~~~LYf~plss~~ly~V~T~~L~~~~~~~~v~~~G~kg~~s~~~~~~~D~~~G~ly~~~~~~~aI~~w~~~~~~~~~~ 312 (381)
T 3q6k_A 233 EGNRPAYYLAGSAIKVYSVNTKELKQKGGKLNPELLGNRGKYNDAIALAYDPKTKVIFFAEANTKQVSCWNTQKMPLRMK 312 (381)
T ss_dssp TSCCEEEEEESSCSEEEEEEHHHHSSTTCCCCCEEEEECCTTCCEEEEEECTTTCEEEEEESSSSEEEEEETTSCSBCGG
T ss_pred CCCeEEEEEECCCCcEEEEEHHHhhCcchhhceEEeeecCCCCCcceEEEeCCCCeEEEEeccCCeEEEEeCCCCccccC
Confidence 666665554444444443 2333222223333221 133445677643344677777788999999875 21 1
Q ss_pred cceEec--CCCCCEEEEEEcCCCCcEEEEE
Q 014454 309 ALHTFD--SHKEEVFQVGWNPKNETILASC 336 (424)
Q Consensus 309 ~~~~~~--~h~~~v~~~~~sp~~~~~l~s~ 336 (424)
....+. ..-..+..+.+.+++. +.+..
T Consensus 313 n~~~l~~d~~l~~pd~~~i~~~g~-Lwv~s 341 (381)
T 3q6k_A 313 NTDVVYTSSRFVFGTDISVDSKGG-LWFMS 341 (381)
T ss_dssp GEEEEEECTTCCSEEEEEECTTSC-EEEEE
T ss_pred ceEEEEECCCccccCeEEECCCCe-EEEEE
Confidence 112211 1122466777766663 44333
Done!