Query 014457
Match_columns 424
No_of_seqs 410 out of 2087
Neff 7.1
Searched_HMMs 29240
Date Mon Mar 25 11:55:09 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/014457.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/014457hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2nyi_A Unknown protein; protei 99.7 1.3E-17 4.3E-22 153.8 14.6 142 221-368 4-161 (195)
2 1u8s_A Glycine cleavage system 99.7 5.4E-16 1.8E-20 142.3 17.6 139 222-368 6-164 (192)
3 2nyi_A Unknown protein; protei 99.7 5E-16 1.7E-20 143.1 13.8 158 80-293 4-163 (195)
4 1u8s_A Glycine cleavage system 99.6 9.7E-15 3.3E-19 133.9 16.0 157 81-293 6-166 (192)
5 3p96_A Phosphoserine phosphata 98.8 2.3E-07 8E-12 94.1 17.9 122 221-347 11-149 (415)
6 3p96_A Phosphoserine phosphata 98.6 5E-07 1.7E-11 91.6 16.4 139 80-270 11-150 (415)
7 2f06_A Conserved hypothetical 98.6 8.7E-07 3E-11 76.8 14.3 112 223-346 7-118 (144)
8 1zpv_A ACT domain protein; str 98.1 7.8E-06 2.7E-10 64.8 8.6 66 81-153 5-70 (91)
9 1zpv_A ACT domain protein; str 98.1 3.5E-05 1.2E-09 60.9 11.0 65 222-292 5-69 (91)
10 2f06_A Conserved hypothetical 98.0 0.00028 9.4E-09 60.8 16.6 105 82-262 7-112 (144)
11 2ko1_A CTR148A, GTP pyrophosph 97.8 5.5E-05 1.9E-09 59.1 8.1 49 81-129 5-53 (88)
12 2ko1_A CTR148A, GTP pyrophosph 97.8 9.3E-05 3.2E-09 57.8 8.7 64 300-368 5-68 (88)
13 2re1_A Aspartokinase, alpha an 97.6 0.0005 1.7E-08 60.9 11.6 104 221-335 24-139 (167)
14 3obi_A Formyltetrahydrofolate 97.3 0.0076 2.6E-07 58.2 16.8 105 222-331 6-120 (288)
15 3n0v_A Formyltetrahydrofolate 97.2 0.0092 3.2E-07 57.5 16.0 101 222-328 8-118 (286)
16 3o1l_A Formyltetrahydrofolate 97.2 0.007 2.4E-07 58.8 15.2 102 222-328 22-133 (302)
17 2dtj_A Aspartokinase; protein- 97.2 0.0029 9.9E-08 56.6 11.4 131 220-367 13-157 (178)
18 2re1_A Aspartokinase, alpha an 97.2 0.023 7.8E-07 50.1 16.8 112 78-254 22-138 (167)
19 3lou_A Formyltetrahydrofolate 97.1 0.015 5.1E-07 56.2 16.0 104 222-329 10-124 (292)
20 3obi_A Formyltetrahydrofolate 97.0 0.0024 8.1E-08 61.8 9.9 65 81-151 6-72 (288)
21 3n0v_A Formyltetrahydrofolate 97.0 0.003 1E-07 61.0 9.9 65 81-152 8-74 (286)
22 2f1f_A Acetolactate synthase i 96.9 0.0018 6.3E-08 57.3 7.6 63 301-369 4-68 (164)
23 3lou_A Formyltetrahydrofolate 96.9 0.0026 9E-08 61.5 9.1 67 81-151 10-78 (292)
24 3nrb_A Formyltetrahydrofolate 96.9 0.022 7.6E-07 54.9 15.6 102 221-329 6-117 (287)
25 2dt9_A Aspartokinase; protein- 96.9 0.0061 2.1E-07 53.8 10.9 103 220-331 14-129 (167)
26 3nrb_A Formyltetrahydrofolate 96.9 0.0026 9E-08 61.4 8.9 64 80-151 6-71 (287)
27 3o1l_A Formyltetrahydrofolate 96.9 0.0023 7.9E-08 62.2 8.5 65 81-151 22-88 (302)
28 2dtj_A Aspartokinase; protein- 96.9 0.073 2.5E-06 47.3 17.5 139 78-294 12-157 (178)
29 2f1f_A Acetolactate synthase i 96.8 0.0038 1.3E-07 55.3 8.5 63 82-152 4-68 (164)
30 2jhe_A Transcription regulator 96.8 0.0053 1.8E-07 53.8 9.1 59 302-368 2-60 (190)
31 3l76_A Aspartokinase; alloster 96.7 0.13 4.4E-06 54.6 20.6 216 79-367 353-589 (600)
32 2pc6_A Probable acetolactate s 96.7 0.0031 1.1E-07 55.9 6.8 63 301-369 5-69 (165)
33 2pc6_A Probable acetolactate s 96.6 0.0066 2.2E-07 53.8 8.6 63 82-152 5-69 (165)
34 3l76_A Aspartokinase; alloster 96.6 0.14 4.8E-06 54.3 20.1 184 80-334 269-479 (600)
35 2jhe_A Transcription regulator 96.4 0.012 4E-07 51.5 9.2 59 83-151 2-60 (190)
36 2dt9_A Aspartokinase; protein- 96.4 0.061 2.1E-06 47.2 13.5 110 78-253 13-129 (167)
37 2fgc_A Acetolactate synthase, 96.4 0.01 3.5E-07 53.7 8.3 64 300-369 29-94 (193)
38 3s1t_A Aspartokinase; ACT doma 96.0 0.078 2.7E-06 47.4 12.2 103 221-332 15-131 (181)
39 1y7p_A Hypothetical protein AF 95.6 0.018 6E-07 53.1 6.4 37 301-337 5-41 (223)
40 2fgc_A Acetolactate synthase, 95.5 0.035 1.2E-06 50.2 7.8 64 81-152 29-94 (193)
41 4go7_X Aspartokinase; transfer 95.5 0.053 1.8E-06 49.4 9.1 134 220-367 33-177 (200)
42 1y7p_A Hypothetical protein AF 95.4 0.018 6.2E-07 53.0 5.5 49 81-129 4-57 (223)
43 2qmx_A Prephenate dehydratase; 95.4 0.04 1.4E-06 52.9 8.2 73 300-374 200-273 (283)
44 3s1t_A Aspartokinase; ACT doma 95.3 1.4 4.9E-05 39.0 18.0 111 79-254 14-131 (181)
45 3ab4_A Aspartokinase; aspartat 95.0 0.18 6E-06 51.0 12.3 102 220-331 262-378 (421)
46 3mwb_A Prephenate dehydratase; 94.9 0.061 2.1E-06 52.4 8.2 111 245-375 163-276 (313)
47 2qmw_A PDT, prephenate dehydra 94.7 0.089 3E-06 50.1 8.3 98 246-368 154-255 (267)
48 4go7_X Aspartokinase; transfer 94.4 0.48 1.6E-05 43.0 12.2 52 78-129 32-87 (200)
49 3luy_A Probable chorismate mut 94.3 0.15 5E-06 50.1 9.1 72 301-374 207-281 (329)
50 3ab4_A Aspartokinase; aspartat 94.1 2.6 8.9E-05 42.4 18.2 136 80-293 263-405 (421)
51 3c1m_A Probable aspartokinase; 93.8 0.45 1.5E-05 48.9 12.2 131 220-367 316-468 (473)
52 1sc6_A PGDH, D-3-phosphoglycer 92.8 0.18 6.3E-06 50.7 7.1 47 300-346 331-377 (404)
53 1ygy_A PGDH, D-3-phosphoglycer 91.3 0.83 2.8E-05 47.5 10.3 63 298-364 452-516 (529)
54 3c1m_A Probable aspartokinase; 90.4 6.1 0.00021 40.3 15.6 115 79-251 316-436 (473)
55 3tvi_A Aspartokinase; structur 89.4 2.6 8.8E-05 42.9 11.7 132 221-367 297-438 (446)
56 1sc6_A PGDH, D-3-phosphoglycer 88.9 1.2 4E-05 44.8 8.7 48 221-268 330-377 (404)
57 1phz_A Protein (phenylalanine 88.1 0.47 1.6E-05 47.8 5.0 67 300-369 34-101 (429)
58 1ygy_A PGDH, D-3-phosphoglycer 87.9 1.9 6.6E-05 44.7 9.8 65 77-147 450-516 (529)
59 3mtj_A Homoserine dehydrogenas 85.8 1.9 6.6E-05 43.8 8.2 50 300-349 359-410 (444)
60 3k5p_A D-3-phosphoglycerate de 85.7 1.3 4.5E-05 44.7 6.8 49 221-272 342-390 (416)
61 3k5p_A D-3-phosphoglycerate de 85.3 3.1 0.00011 41.9 9.4 47 300-346 343-389 (416)
62 2cdq_A Aspartokinase; aspartat 84.5 3.1 0.00011 43.0 9.2 135 221-367 340-483 (510)
63 3mah_A Aspartokinase; aspartat 79.2 2.9 9.8E-05 35.9 5.6 125 221-367 17-150 (157)
64 3tvi_A Aspartokinase; structur 75.4 16 0.00054 37.0 10.7 34 221-254 373-409 (446)
65 2qmx_A Prephenate dehydratase; 74.9 8.1 0.00028 36.8 7.9 56 80-138 199-255 (283)
66 1ib8_A Conserved protein SP14. 74.1 16 0.00053 31.8 9.0 92 235-335 14-111 (164)
67 3luy_A Probable chorismate mut 72.3 21 0.00071 34.7 10.2 57 80-139 205-264 (329)
68 3mtj_A Homoserine dehydrogenas 71.7 5.3 0.00018 40.6 6.1 50 80-129 358-409 (444)
69 3mwb_A Prephenate dehydratase; 69.3 10 0.00035 36.6 7.3 57 80-139 200-258 (313)
70 2qmw_A PDT, prephenate dehydra 64.2 19 0.00067 33.8 7.9 51 79-129 184-238 (267)
71 2cdq_A Aspartokinase; aspartat 63.2 49 0.0017 33.9 11.5 33 80-112 340-375 (510)
72 1phz_A Protein (phenylalanine 43.0 26 0.00089 35.2 5.1 52 78-129 31-83 (429)
73 3g12_A Putative lactoylglutath 42.5 58 0.002 25.8 6.5 49 221-276 66-115 (128)
74 2j0w_A Lysine-sensitive aspart 41.8 13 0.00045 37.6 2.8 134 221-366 307-447 (449)
75 1zhv_A Hypothetical protein AT 39.8 18 0.00061 30.4 2.9 28 308-337 73-100 (134)
76 3mah_A Aspartokinase; aspartat 38.2 21 0.00073 30.2 3.3 47 79-129 16-65 (157)
77 1zvp_A Hypothetical protein VC 37.1 23 0.00079 29.7 3.2 30 306-337 80-109 (133)
78 3g12_A Putative lactoylglutath 33.1 1.1E+02 0.0037 24.1 6.7 50 79-136 65-115 (128)
79 3r6a_A Uncharacterized protein 28.6 1.2E+02 0.0042 24.5 6.4 46 302-354 68-113 (144)
80 1rwu_A Hypothetical UPF0250 pr 28.2 2.3E+02 0.0078 22.6 8.2 62 222-290 36-100 (109)
81 1tdj_A Biosynthetic threonine 25.6 1.5E+02 0.005 30.4 7.6 111 222-339 338-471 (514)
82 3r6a_A Uncharacterized protein 25.3 1.4E+02 0.0049 24.1 6.3 47 223-276 67-113 (144)
83 1zvp_A Hypothetical protein VC 24.7 68 0.0023 26.7 4.0 47 78-129 68-117 (133)
84 3rri_A Glyoxalase/bleomycin re 24.0 1.1E+02 0.0038 23.7 5.2 51 303-354 71-123 (135)
85 3kol_A Oxidoreductase, glyoxal 21.6 1.1E+02 0.0037 24.2 4.8 38 314-354 109-146 (156)
86 1zhv_A Hypothetical protein AT 20.6 51 0.0017 27.6 2.4 45 80-129 61-108 (134)
87 3zw5_A Glyoxalase domain-conta 20.2 88 0.003 25.2 3.9 42 313-354 100-142 (147)
No 1
>2nyi_A Unknown protein; protein structure initiative, PSI, center for eukaryotic structural genomics, CESG, structural genomics; 1.80A {Galdieria sulphuraria}
Probab=99.75 E-value=1.3e-17 Score=153.82 Aligned_cols=142 Identities=15% Similarity=0.096 Sum_probs=112.7
Q ss_pred CeEEEEEEecCChhHHHHHHHHHHhCCceEEEEEEEeeCC-eEEEEEEEeecCCCCCCCHHHHHHHHHHHHHHHhhc---
Q 014457 221 GYSVVNIKCIDRPKLLFDTLCALTDLQYVVFHAAISSKGC-FADQEYFIRQTDGCTLDTESQRQKLTQCLIAAIERR--- 296 (424)
Q Consensus 221 ~~tvV~V~~~DRpgLL~~i~~~L~~~gl~I~~A~I~T~~~-~a~d~F~V~~~~g~~~~~~~~~~~l~~~L~~al~rr--- 296 (424)
..++|+|+|+|||||++.|+++|+++|+||.++++++..+ +++ .|.|.... . .....++.|++.|.....+.
T Consensus 4 ~~~~ltv~~~DrpGiva~vs~~La~~g~NI~da~q~~~~~~f~m-~~~v~~~~-~--~~~~~~~~l~~~L~~~~~~~~~~ 79 (195)
T 2nyi_A 4 QSFVVSVAGSDRVGIVHDFSWALKNISANVESSRMACLGGDFAM-IVLVSLNA-K--DGKLIQSALESALPGFQISTRRA 79 (195)
T ss_dssp EEEEEEEEEECCTTHHHHHHHHHHHTTCEEEEEEEEEETTEEEE-EEEEEESS-S--SSHHHHHHHHHHSTTCEEEEEEC
T ss_pred eEEEEEEEeCCCCcHHHHHHHHHHHCCCCEEEEEeEEECCeEEE-EEEEEecC-c--cchhHHHHHHHHHHHHHHhcCCe
Confidence 4579999999999999999999999999999999998555 554 77775432 1 22235677777776543210
Q ss_pred ----------CCCceEEEEEeCCCCchHHHHHHHHHHCCceEEEEEEeecC--CceeeEEEEEeCCCCCCChHHHHHHHH
Q 014457 297 ----------VSHGLRLEICTQNRMGLLSDVTRAFRENGLSVSMAEIGTNG--EKATGSFYVMDASGHDVNQRTVELLKQ 364 (424)
Q Consensus 297 ----------~~~~~~lev~~~DrpGLL~~Itr~l~e~gl~I~~A~i~T~g--~~a~d~Fyv~d~~g~~v~~~~~~~lr~ 364 (424)
....++|+|.++|||||+++||++|+++|+||..++..|.+ +++.+.||++...+.| .+.. +.|++
T Consensus 80 ~~~~~~~~~~~~~~~iltv~g~DrpGiva~Vt~~La~~g~nI~~~~~~t~~~~~~~~~~F~m~~~~~~~-~~~~-~~l~~ 157 (195)
T 2nyi_A 80 SSVAERHVSPDTREYELYVEGPDSEGIVEAVTAVLAKKGANIVELETETLPAPFAGFTLFRMGSRVAFP-FPLY-QEVVT 157 (195)
T ss_dssp CCC----CCTTEEEEEEEEEEECCTTHHHHHHHHHHHTTCEEEEEEEEEEECSSTTCEEEEEEEEEEEE-GGGH-HHHHH
T ss_pred EEEEeCCcCCCCcEEEEEEEeCCCcCHHHHHHHHHHHcCCCEEEceeeecccccCCCCeEEEEEEEEcC-CCcc-HHHHH
Confidence 11358999999999999999999999999999999999998 7889999998877655 2335 77888
Q ss_pred HHHh
Q 014457 365 EIGG 368 (424)
Q Consensus 365 ~l~~ 368 (424)
+|..
T Consensus 158 ~l~~ 161 (195)
T 2nyi_A 158 ALSR 161 (195)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 7775
No 2
>1u8s_A Glycine cleavage system transcriptional repressor, putative; structural genomics, protein structure initiative (PSI), domain swapping; 2.45A {Vibrio cholerae} SCOP: d.58.18.5 d.58.18.5
Probab=99.70 E-value=5.4e-16 Score=142.27 Aligned_cols=139 Identities=14% Similarity=0.174 Sum_probs=109.3
Q ss_pred eEEEEEEecCChhHHHHHHHHHHhCCceEEEEEEEeeCCeEEEEEEEeecCCCCCCCHHHHHHHHHHHHHHHhh------
Q 014457 222 YSVVNIKCIDRPKLLFDTLCALTDLQYVVFHAAISSKGCFADQEYFIRQTDGCTLDTESQRQKLTQCLIAAIER------ 295 (424)
Q Consensus 222 ~tvV~V~~~DRpgLL~~i~~~L~~~gl~I~~A~I~T~~~~a~d~F~V~~~~g~~~~~~~~~~~l~~~L~~al~r------ 295 (424)
..+|+|.|+||||++++|+++|+++|+||.++++++..+...-.|.|..+ +...+.|++.|.+....
T Consensus 6 ~~~itv~~~DrpGiva~vt~~La~~g~NI~d~~~~~~~~~f~~~~~v~~~-------~~~~~~l~~~L~~~~~~~~~~~~ 78 (192)
T 1u8s_A 6 HLVITAVGTDRPGICNEVVRLVTQAGCNIIDSRIAMFGKEFTLLMLISGS-------PSNITRVETTLPLLGQQHDLITM 78 (192)
T ss_dssp EEEEEEEEECCTTHHHHHHHHHHHTTCEEEEEEEEEETTEEEEEEEEEEC-------HHHHHHHHHHHHHHHHHHTCEEE
T ss_pred EEEEEEEcCCCCcHHHHHHHHHHHCCCCEEeeeeeecCCceEEEEEEecC-------CCCHHHHHHHHHHHHHhcCCEEE
Confidence 57999999999999999999999999999999999866655457777542 13678888888765531
Q ss_pred --cC---C-----CceEEEEEeCCCCchHHHHHHHHHHCCceEEEEEEeecCC----ceeeEEEEEeCCCCCCChHHHHH
Q 014457 296 --RV---S-----HGLRLEICTQNRMGLLSDVTRAFRENGLSVSMAEIGTNGE----KATGSFYVMDASGHDVNQRTVEL 361 (424)
Q Consensus 296 --r~---~-----~~~~lev~~~DrpGLL~~Itr~l~e~gl~I~~A~i~T~g~----~a~d~Fyv~d~~g~~v~~~~~~~ 361 (424)
+. + ..++|+|.++||||+|++|+++|+++|+||..++..|.++ ++.+.||++...+.| ++..++.
T Consensus 79 ~~~~~~~~~~~~~~~~~l~v~~~D~~Gil~~v~~~l~~~~~nI~~~~~~t~~~~~~~~~~~~F~~~~~~~~~-~~~~~~~ 157 (192)
T 1u8s_A 79 MKRTSPHDHQTHAYTVEVYVESDDKLGLTEKFTQFFAQRQIGMASLSAQTISKDKLHSEQNQFHIAISARVD-SGCNLMQ 157 (192)
T ss_dssp EEEECCCCCCCCSEEEEEEEEESCCTTHHHHHHHHHHHTTCCEEEEEEEEEC--------CEEEEEEEEEEC-TTSCHHH
T ss_pred EEeCCCCCCccCCceEEEEEEeCCCccHHHHHHHHHHHcCCcHHHhhhhcccCCccCCCCCEEEEEEEEeCC-CCCCHHH
Confidence 11 1 2579999999999999999999999999999999999985 689999998876544 2235677
Q ss_pred HHHHHHh
Q 014457 362 LKQEIGG 368 (424)
Q Consensus 362 lr~~l~~ 368 (424)
|+++|..
T Consensus 158 l~~~l~~ 164 (192)
T 1u8s_A 158 LQEEFDA 164 (192)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 7777765
No 3
>2nyi_A Unknown protein; protein structure initiative, PSI, center for eukaryotic structural genomics, CESG, structural genomics; 1.80A {Galdieria sulphuraria}
Probab=99.67 E-value=5e-16 Score=143.12 Aligned_cols=158 Identities=11% Similarity=0.050 Sum_probs=112.1
Q ss_pred CcEEEEEEeCCcchHHHHHHHHHHHcCceEeeEEEEcCCceEEEEEEEecCCCCCCCCcHHHHHHHHHHHHHHHccCCCC
Q 014457 80 ENTALEVTGVDRPGLMSEISAVLYELGCHVPAAVAWTHKTRAACIFYIEDGLEGRPITAPEMLAHVEEQLEIVVGAHHGE 159 (424)
Q Consensus 80 ~~t~iev~~~DRpGLLs~I~~vL~~~~~~I~~A~i~T~~~r~~dvf~V~d~~~g~~i~d~~~~~~i~~~L~~~L~~~~~~ 159 (424)
...+|.|+|+|||||++.|+++|+++||||++|+++|..+++.-.|.|..+ . . ..+.+++.|++.|..++.+..
T Consensus 4 ~~~~ltv~~~DrpGiva~vs~~La~~g~NI~da~q~~~~~~f~m~~~v~~~-~-~--~~~~~~~~l~~~L~~~~~~~~-- 77 (195)
T 2nyi_A 4 QSFVVSVAGSDRVGIVHDFSWALKNISANVESSRMACLGGDFAMIVLVSLN-A-K--DGKLIQSALESALPGFQISTR-- 77 (195)
T ss_dssp EEEEEEEEEECCTTHHHHHHHHHHHTTCEEEEEEEEEETTEEEEEEEEEES-S-S--SSHHHHHHHHHHSTTCEEEEE--
T ss_pred eEEEEEEEeCCCCcHHHHHHHHHHHCCCCEEEEEeEEECCeEEEEEEEEec-C-c--cchhHHHHHHHHHHHHHHhcC--
Confidence 357899999999999999999999999999999999977777778888763 2 1 223456666666543322110
Q ss_pred CccceeeccCCCCCCcchhhhhhhhhhcccccccccCCCCCCCCCCCCCccEEEEeecCCCCeEEEEEEecCChhHHHHH
Q 014457 160 GETRSVRLTTPMPGRTHTERRLHQLMYADRDYELCRGCDGGAGHWNGCTRTHVLIDSCKEKGYSVVNIKCIDRPKLLFDT 239 (424)
Q Consensus 160 ~~~~~~~~~~~~~g~~h~errl~q~m~~~~~~~~~~~~~~~~~~~~~~~~p~V~v~~~~~~~~tvV~V~~~DRpgLL~~i 239 (424)
+. .+++ . .+ . ......++|+|.|+|||||+++|
T Consensus 78 -----~~------------~~~~----------------------~---~~----~-~~~~~~~iltv~g~DrpGiva~V 110 (195)
T 2nyi_A 78 -----RA------------SSVA----------------------E---RH----V-SPDTREYELYVEGPDSEGIVEAV 110 (195)
T ss_dssp -----EC------------CCC---------------------------------C-CTTEEEEEEEEEEECCTTHHHHH
T ss_pred -----Ce------------EEEE----------------------e---CC----c-CCCCcEEEEEEEeCCCcCHHHHH
Confidence 10 1111 0 01 0 12235689999999999999999
Q ss_pred HHHHHhCCceEEEEEEEeeC--CeEEEEEEEeecCCCCCCCHHHHHHHHHHHHHHH
Q 014457 240 LCALTDLQYVVFHAAISSKG--CFADQEYFIRQTDGCTLDTESQRQKLTQCLIAAI 293 (424)
Q Consensus 240 ~~~L~~~gl~I~~A~I~T~~--~~a~d~F~V~~~~g~~~~~~~~~~~l~~~L~~al 293 (424)
+.+|+++|+||.+++..|.+ ....+.|+++...+.+ +... +.|++.|....
T Consensus 111 t~~La~~g~nI~~~~~~t~~~~~~~~~~F~m~~~~~~~--~~~~-~~l~~~l~~~a 163 (195)
T 2nyi_A 111 TAVLAKKGANIVELETETLPAPFAGFTLFRMGSRVAFP--FPLY-QEVVTALSRVE 163 (195)
T ss_dssp HHHHHHTTCEEEEEEEEEEECSSTTCEEEEEEEEEEEE--GGGH-HHHHHHHHHHH
T ss_pred HHHHHHcCCCEEEceeeecccccCCCCeEEEEEEEEcC--CCcc-HHHHHHHHHHH
Confidence 99999999999999999976 4456778887655433 1224 77777776543
No 4
>1u8s_A Glycine cleavage system transcriptional repressor, putative; structural genomics, protein structure initiative (PSI), domain swapping; 2.45A {Vibrio cholerae} SCOP: d.58.18.5 d.58.18.5
Probab=99.61 E-value=9.7e-15 Score=133.86 Aligned_cols=157 Identities=13% Similarity=0.151 Sum_probs=112.7
Q ss_pred cEEEEEEeCCcchHHHHHHHHHHHcCceEeeEEEEcCCceEEEEEEEecCCCCCCCCcHHHHHHHHHHHHHHHccCCCCC
Q 014457 81 NTALEVTGVDRPGLMSEISAVLYELGCHVPAAVAWTHKTRAACIFYIEDGLEGRPITAPEMLAHVEEQLEIVVGAHHGEG 160 (424)
Q Consensus 81 ~t~iev~~~DRpGLLs~I~~vL~~~~~~I~~A~i~T~~~r~~dvf~V~d~~~g~~i~d~~~~~~i~~~L~~~L~~~~~~~ 160 (424)
..+|.|+|+||||++++|+++|+++||||.++++.+..+...-.|.|..+ +..++.|++.|..+.. ....
T Consensus 6 ~~~itv~~~DrpGiva~vt~~La~~g~NI~d~~~~~~~~~f~~~~~v~~~--------~~~~~~l~~~L~~~~~-~~~~- 75 (192)
T 1u8s_A 6 HLVITAVGTDRPGICNEVVRLVTQAGCNIIDSRIAMFGKEFTLLMLISGS--------PSNITRVETTLPLLGQ-QHDL- 75 (192)
T ss_dssp EEEEEEEEECCTTHHHHHHHHHHHTTCEEEEEEEEEETTEEEEEEEEEEC--------HHHHHHHHHHHHHHHH-HHTC-
T ss_pred EEEEEEEcCCCCcHHHHHHHHHHHCCCCEEeeeeeecCCceEEEEEEecC--------CCCHHHHHHHHHHHHH-hcCC-
Confidence 46899999999999999999999999999999999977887778888662 1466888888877653 2111
Q ss_pred ccceeeccCCCCCCcchhhhhhhhhhcccccccccCCCCCCCCCCCCCccEEEEeecCCCCeEEEEEEecCChhHHHHHH
Q 014457 161 ETRSVRLTTPMPGRTHTERRLHQLMYADRDYELCRGCDGGAGHWNGCTRTHVLIDSCKEKGYSVVNIKCIDRPKLLFDTL 240 (424)
Q Consensus 161 ~~~~~~~~~~~~g~~h~errl~q~m~~~~~~~~~~~~~~~~~~~~~~~~p~V~v~~~~~~~~tvV~V~~~DRpgLL~~i~ 240 (424)
. . +++ ..+. ++ +..+...++|.|.|+||||++++|+
T Consensus 76 -~--~--------------~~~-------~~~~---------------~~-----~~~~~~~~~l~v~~~D~~Gil~~v~ 111 (192)
T 1u8s_A 76 -I--T--------------MMK-------RTSP---------------HD-----HQTHAYTVEVYVESDDKLGLTEKFT 111 (192)
T ss_dssp -E--E--------------EEE-------EECC---------------CC-----CCCCSEEEEEEEEESCCTTHHHHHH
T ss_pred -E--E--------------EEE-------eCCC---------------CC-----CccCCceEEEEEEeCCCccHHHHHH
Confidence 0 1 111 0000 01 1223356799999999999999999
Q ss_pred HHHHhCCceEEEEEEEeeCC----eEEEEEEEeecCCCCCCCHHHHHHHHHHHHHHH
Q 014457 241 CALTDLQYVVFHAAISSKGC----FADQEYFIRQTDGCTLDTESQRQKLTQCLIAAI 293 (424)
Q Consensus 241 ~~L~~~gl~I~~A~I~T~~~----~a~d~F~V~~~~g~~~~~~~~~~~l~~~L~~al 293 (424)
.+|+++|+||.+++..|.+. ...+.|+++..-+.+- ....+.|++.|.+..
T Consensus 112 ~~l~~~~~nI~~~~~~t~~~~~~~~~~~~F~~~~~~~~~~--~~~~~~l~~~l~~~~ 166 (192)
T 1u8s_A 112 QFFAQRQIGMASLSAQTISKDKLHSEQNQFHIAISARVDS--GCNLMQLQEEFDALC 166 (192)
T ss_dssp HHHHHTTCCEEEEEEEEEC--------CEEEEEEEEEECT--TSCHHHHHHHHHHHH
T ss_pred HHHHHcCCcHHHhhhhcccCCccCCCCCEEEEEEEEeCCC--CCCHHHHHHHHHHHH
Confidence 99999999999999999763 4567788876543221 124567777776543
No 5
>3p96_A Phosphoserine phosphatase SERB; ssgcid, structural genomics, structural genomics center for infectious disease, hydrolas; 2.05A {Mycobacterium avium}
Probab=98.76 E-value=2.3e-07 Score=94.10 Aligned_cols=122 Identities=9% Similarity=0.045 Sum_probs=88.3
Q ss_pred CeEEEEEEecCChhHHHHHHHHHHhCCceEEEEEEEeeCCeEEEEEEEeecCCCCCCCHHHHHHHHHHHHHHHh------
Q 014457 221 GYSVVNIKCIDRPKLLFDTLCALTDLQYVVFHAAISSKGCFADQEYFIRQTDGCTLDTESQRQKLTQCLIAAIE------ 294 (424)
Q Consensus 221 ~~tvV~V~~~DRpgLL~~i~~~L~~~gl~I~~A~I~T~~~~a~d~F~V~~~~g~~~~~~~~~~~l~~~L~~al~------ 294 (424)
...+|+|.|+|||||++.|+..|+++|+||.+..-.+.+|+..-...+.-+.+. ...+.|++.|...-+
T Consensus 11 ~~~~lt~~g~Dr~Giv~~vs~~l~~~~~nI~d~~q~~~~~~f~~~~~~~~~~~~-----~~~~~l~~~l~~~~~~~~~~~ 85 (415)
T 3p96_A 11 VSVLITVTGVDQPGVTATLFEVLSRHGVELLNVEQVVIRHRLTLGVLVCCPADV-----ADGPALRHDVEAAIRKVGLDV 85 (415)
T ss_dssp EEEEEEEEEECCTTHHHHHHHHHTTTTCEEEEEEEEEETTEEEEEEEEEECHHH-----HTSHHHHHHHHHHHHHTTCEE
T ss_pred CeEEEEEEcCCCCCHHHHHHHHHHHCCCCEEEeeeEEECCEeEEEEEEEecCCc-----CCHHHHHHHHHHHHHHcCeEE
Confidence 357999999999999999999999999999999998877754333333221110 023567777765321
Q ss_pred --h------cCC--CceEEEEEeCC-CCchHHHHHHHHHHCCceEEEEEEeecCCceeeEEEEE
Q 014457 295 --R------RVS--HGLRLEICTQN-RMGLLSDVTRAFRENGLSVSMAEIGTNGEKATGSFYVM 347 (424)
Q Consensus 295 --r------r~~--~~~~lev~~~D-rpGLL~~Itr~l~e~gl~I~~A~i~T~g~~a~d~Fyv~ 347 (424)
+ +.+ ..+.+++.+.| ++|++.+|+.+|+++|+||.....-+......=.|++.
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~llg~~~~~~~~~~i~~~l~~~~~Ni~~l~~~~~~~~~~~~~~v~ 149 (415)
T 3p96_A 86 SIERSDDVPIIREPSTHTIFVLGRPITAAAFGAVAREVAALGVNIDLIRGVSDYPVIGLELRVS 149 (415)
T ss_dssp EEEECSSSCSSCCCCSEEEEEEESSCCHHHHHHHHHHHHHTTCEEEEEEEEESSSSEEEEEEEE
T ss_pred EEEECCcccccCCCCcEEEEEEeCCCCHHHHHHHHHHHHHcCCCccceeeccCCCceEEEEEee
Confidence 0 112 26799999999 99999999999999999999877766433333336663
No 6
>3p96_A Phosphoserine phosphatase SERB; ssgcid, structural genomics, structural genomics center for infectious disease, hydrolas; 2.05A {Mycobacterium avium}
Probab=98.64 E-value=5e-07 Score=91.63 Aligned_cols=139 Identities=12% Similarity=0.024 Sum_probs=95.5
Q ss_pred CcEEEEEEeCCcchHHHHHHHHHHHcCceEeeEEEEcCCceEEEEEEEecCCCCCCCCcHHHHHHHHHHHHHHHccCCCC
Q 014457 80 ENTALEVTGVDRPGLMSEISAVLYELGCHVPAAVAWTHKTRAACIFYIEDGLEGRPITAPEMLAHVEEQLEIVVGAHHGE 159 (424)
Q Consensus 80 ~~t~iev~~~DRpGLLs~I~~vL~~~~~~I~~A~i~T~~~r~~dvf~V~d~~~g~~i~d~~~~~~i~~~L~~~L~~~~~~ 159 (424)
...+|+|+|+||||+.+.|+++|+++||||.+....+.++++.-...+.-+ .. ....+.|++.|..+ ......
T Consensus 11 ~~~~lt~~g~Dr~Giv~~vs~~l~~~~~nI~d~~q~~~~~~f~~~~~~~~~-~~-----~~~~~~l~~~l~~~-~~~~~~ 83 (415)
T 3p96_A 11 VSVLITVTGVDQPGVTATLFEVLSRHGVELLNVEQVVIRHRLTLGVLVCCP-AD-----VADGPALRHDVEAA-IRKVGL 83 (415)
T ss_dssp EEEEEEEEEECCTTHHHHHHHHHTTTTCEEEEEEEEEETTEEEEEEEEEEC-HH-----HHTSHHHHHHHHHH-HHHTTC
T ss_pred CeEEEEEEcCCCCCHHHHHHHHHHHCCCCEEEeeeEEECCEeEEEEEEEec-CC-----cCCHHHHHHHHHHH-HHHcCe
Confidence 457899999999999999999999999999999999888887776666542 11 00226677777543 322222
Q ss_pred CccceeeccCCCCCCcchhhhhhhhhhcccccccccCCCCCCCCCCCCCccEEEEeecCCCCeEEEEEEecC-ChhHHHH
Q 014457 160 GETRSVRLTTPMPGRTHTERRLHQLMYADRDYELCRGCDGGAGHWNGCTRTHVLIDSCKEKGYSVVNIKCID-RPKLLFD 238 (424)
Q Consensus 160 ~~~~~~~~~~~~~g~~h~errl~q~m~~~~~~~~~~~~~~~~~~~~~~~~p~V~v~~~~~~~~tvV~V~~~D-RpgLL~~ 238 (424)
. .+++ +.+. . +.+ .......+.+.++| +|+++.+
T Consensus 84 --~----------------~~~~-------~~~~-----------~----~~~-----~~~~~~~~~llg~~~~~~~~~~ 118 (415)
T 3p96_A 84 --D----------------VSIE-------RSDD-----------V----PII-----REPSTHTIFVLGRPITAAAFGA 118 (415)
T ss_dssp --E----------------EEEE-------ECSS-----------S----CSS-----CCCCSEEEEEEESSCCHHHHHH
T ss_pred --E----------------EEEE-------ECCc-----------c----ccc-----CCCCcEEEEEEeCCCCHHHHHH
Confidence 0 1221 0000 0 000 12346689999999 9999999
Q ss_pred HHHHHHhCCceEEEEEEEeeCCeEEEEEEEee
Q 014457 239 TLCALTDLQYVVFHAAISSKGCFADQEYFIRQ 270 (424)
Q Consensus 239 i~~~L~~~gl~I~~A~I~T~~~~a~d~F~V~~ 270 (424)
++..|+++|.||......+......-.|+|..
T Consensus 119 i~~~l~~~~~Ni~~l~~~~~~~~~~~~~~v~~ 150 (415)
T 3p96_A 119 VAREVAALGVNIDLIRGVSDYPVIGLELRVSV 150 (415)
T ss_dssp HHHHHHHTTCEEEEEEEEESSSSEEEEEEEEC
T ss_pred HHHHHHHcCCCccceeeccCCCceEEEEEeeC
Confidence 99999999999998888774333334466643
No 7
>2f06_A Conserved hypothetical protein; structural genomics hypothetical protein, PSI, protein struc initiative; HET: MSE HIS; 2.10A {Bacteroides thetaiotaomicron} SCOP: d.58.18.11 d.58.18.11
Probab=98.60 E-value=8.7e-07 Score=76.79 Aligned_cols=112 Identities=14% Similarity=0.043 Sum_probs=74.9
Q ss_pred EEEEEEecCChhHHHHHHHHHHhCCceEEEEEEEeeCCeEEEEEEEeecCCCCCCCHHHHHHHHHHHHHHHhhcCCCceE
Q 014457 223 SVVNIKCIDRPKLLFDTLCALTDLQYVVFHAAISSKGCFADQEYFIRQTDGCTLDTESQRQKLTQCLIAAIERRVSHGLR 302 (424)
Q Consensus 223 tvV~V~~~DRpgLL~~i~~~L~~~gl~I~~A~I~T~~~~a~d~F~V~~~~g~~~~~~~~~~~l~~~L~~al~rr~~~~~~ 302 (424)
..++|..+|+||.++++++.|++.|+||....+....+...-.|.+ .+ .++.++.|++. .-......+
T Consensus 7 ~~i~v~v~d~~G~l~~i~~~la~~~inI~~i~~~~~~~~~~~~~~~--------~d---~~~a~~~L~~~-G~~v~~~sv 74 (144)
T 2f06_A 7 KQLSIFLENKSGRLTEVTEVLAKENINLSALCIAENADFGILRGIV--------SD---PDKAYKALKDN-HFAVNITDV 74 (144)
T ss_dssp EEEEEEECSSSSHHHHHHHHHHHTTCCEEEEEEEECSSCEEEEEEE--------SC---HHHHHHHHHHT-TCCEEEEEE
T ss_pred EEEEEEecCCCcHHHHHHHHHHHCCCCEEEEEEEecCCCCEEEEEe--------CC---HHHHHHHHHHc-CCeEeeeeE
Confidence 4788899999999999999999999999998776432222222332 12 23444445432 101111236
Q ss_pred EEEEeCCCCchHHHHHHHHHHCCceEEEEEEeecCCceeeEEEE
Q 014457 303 LEICTQNRMGLLSDVTRAFRENGLSVSMAEIGTNGEKATGSFYV 346 (424)
Q Consensus 303 lev~~~DrpGLL~~Itr~l~e~gl~I~~A~i~T~g~~a~d~Fyv 346 (424)
+-+..+|+||.+++++++|+++|+||.+......+.++.=.|-+
T Consensus 75 v~v~~~d~pGvla~i~~~L~~~~InI~~~~~~~~~~~~~~~i~~ 118 (144)
T 2f06_A 75 VGISCPNVPGALAKVLGFLSAEGVFIEYMYSFANNNVANVVIRP 118 (144)
T ss_dssp EEEEEESSTTHHHHHHHHHHHTTCCEEEEEEEEETTEEEEEEEE
T ss_pred EEEEeCCCCcHHHHHHHHHHHCCCCEEEEEEEccCCcEEEEEEe
Confidence 77788999999999999999999999876554233444434433
No 8
>1zpv_A ACT domain protein; structural genomics, PSI, protein structure INIT midwest center for structural genomics, MCSG, unknown funct; 1.90A {Streptococcus pneumoniae} SCOP: d.58.18.7
Probab=98.15 E-value=7.8e-06 Score=64.82 Aligned_cols=66 Identities=14% Similarity=0.256 Sum_probs=51.8
Q ss_pred cEEEEEEeCCcchHHHHHHHHHHHcCceEeeEEEEcCCceEEEEEEEecCCCCCCCCcHHHHHHHHHHHHHHH
Q 014457 81 NTALEVTGVDRPGLMSEISAVLYELGCHVPAAVAWTHKTRAACIFYIEDGLEGRPITAPEMLAHVEEQLEIVV 153 (424)
Q Consensus 81 ~t~iev~~~DRpGLLs~I~~vL~~~~~~I~~A~i~T~~~r~~dvf~V~d~~~g~~i~d~~~~~~i~~~L~~~L 153 (424)
...|++.++||||+|++|+++|+++|+||.+....+.++.+.-.+.+.-+ +. ..++.|.+.|.++-
T Consensus 5 ~~~l~v~~~DrpGila~vt~~la~~~~NI~~i~~~~~~~~~~~~i~v~~~--~~-----~~l~~l~~~L~~~~ 70 (91)
T 1zpv_A 5 KAIITVVGKDKSGIVAGVSGKIAELGLNIDDISQTVLDEYFTMMAVVSSD--EK-----QDFTYLRNEFEAFG 70 (91)
T ss_dssp EEEEEEEESCCTTHHHHHHHHHHHTTCEEEEEEEEEETTEEEEEEEEEES--SC-----CCHHHHHHHHHHHH
T ss_pred eEEEEEEECCCCCHHHHHHHHHHHcCCCEEEEEeEEEcCEEEEEEEEEeC--CC-----CCHHHHHHHHHHHH
Confidence 46899999999999999999999999999999998866777777766442 11 23467777776543
No 9
>1zpv_A ACT domain protein; structural genomics, PSI, protein structure INIT midwest center for structural genomics, MCSG, unknown funct; 1.90A {Streptococcus pneumoniae} SCOP: d.58.18.7
Probab=98.07 E-value=3.5e-05 Score=60.95 Aligned_cols=65 Identities=6% Similarity=0.036 Sum_probs=50.6
Q ss_pred eEEEEEEecCChhHHHHHHHHHHhCCceEEEEEEEeeCCeEEEEEEEeecCCCCCCCHHHHHHHHHHHHHH
Q 014457 222 YSVVNIKCIDRPKLLFDTLCALTDLQYVVFHAAISSKGCFADQEYFIRQTDGCTLDTESQRQKLTQCLIAA 292 (424)
Q Consensus 222 ~tvV~V~~~DRpgLL~~i~~~L~~~gl~I~~A~I~T~~~~a~d~F~V~~~~g~~~~~~~~~~~l~~~L~~a 292 (424)
...+.|.++||||++++|+.+|+++|+||.+....+..+...-.+.+.-++. ..++.|.+.|.+.
T Consensus 5 ~~~l~v~~~DrpGila~vt~~la~~~~NI~~i~~~~~~~~~~~~i~v~~~~~------~~l~~l~~~L~~~ 69 (91)
T 1zpv_A 5 KAIITVVGKDKSGIVAGVSGKIAELGLNIDDISQTVLDEYFTMMAVVSSDEK------QDFTYLRNEFEAF 69 (91)
T ss_dssp EEEEEEEESCCTTHHHHHHHHHHHTTCEEEEEEEEEETTEEEEEEEEEESSC------CCHHHHHHHHHHH
T ss_pred eEEEEEEECCCCCHHHHHHHHHHHcCCCEEEEEeEEEcCEEEEEEEEEeCCC------CCHHHHHHHHHHH
Confidence 4689999999999999999999999999999999887676655565533321 1356677777654
No 10
>2f06_A Conserved hypothetical protein; structural genomics hypothetical protein, PSI, protein struc initiative; HET: MSE HIS; 2.10A {Bacteroides thetaiotaomicron} SCOP: d.58.18.11 d.58.18.11
Probab=98.02 E-value=0.00028 Score=60.80 Aligned_cols=105 Identities=16% Similarity=0.102 Sum_probs=69.9
Q ss_pred EEEEEEeCCcchHHHHHHHHHHHcCceEeeEEEEc-CCceEEEEEEEecCCCCCCCCcHHHHHHHHHHHHHHHccCCCCC
Q 014457 82 TALEVTGVDRPGLMSEISAVLYELGCHVPAAVAWT-HKTRAACIFYIEDGLEGRPITAPEMLAHVEEQLEIVVGAHHGEG 160 (424)
Q Consensus 82 t~iev~~~DRpGLLs~I~~vL~~~~~~I~~A~i~T-~~~r~~dvf~V~d~~~g~~i~d~~~~~~i~~~L~~~L~~~~~~~ 160 (424)
..|+|..+|+||.+++|+++|++.|+||..-.+.. .+.- .-.|.++ |+++ .++.|.+. +
T Consensus 7 ~~i~v~v~d~~G~l~~i~~~la~~~inI~~i~~~~~~~~~-~~~~~~~---------d~~~---a~~~L~~~-------G 66 (144)
T 2f06_A 7 KQLSIFLENKSGRLTEVTEVLAKENINLSALCIAENADFG-ILRGIVS---------DPDK---AYKALKDN-------H 66 (144)
T ss_dssp EEEEEEECSSSSHHHHHHHHHHHTTCCEEEEEEEECSSCE-EEEEEES---------CHHH---HHHHHHHT-------T
T ss_pred EEEEEEecCCCcHHHHHHHHHHHCCCCEEEEEEEecCCCC-EEEEEeC---------CHHH---HHHHHHHc-------C
Confidence 46888999999999999999999999999876653 3311 1112222 2322 22333210 0
Q ss_pred ccceeeccCCCCCCcchhhhhhhhhhcccccccccCCCCCCCCCCCCCccEEEEeecCCCCeEEEEEEecCChhHHHHHH
Q 014457 161 ETRSVRLTTPMPGRTHTERRLHQLMYADRDYELCRGCDGGAGHWNGCTRTHVLIDSCKEKGYSVVNIKCIDRPKLLFDTL 240 (424)
Q Consensus 161 ~~~~~~~~~~~~g~~h~errl~q~m~~~~~~~~~~~~~~~~~~~~~~~~p~V~v~~~~~~~~tvV~V~~~DRpgLL~~i~ 240 (424)
.. . . .+.++-+..+|+||.+++++
T Consensus 67 ~~------------------v----------------------------~----------~~svv~v~~~d~pGvla~i~ 90 (144)
T 2f06_A 67 FA------------------V----------------------------N----------ITDVVGISCPNVPGALAKVL 90 (144)
T ss_dssp CC------------------E----------------------------E----------EEEEEEEEEESSTTHHHHHH
T ss_pred Ce------------------E----------------------------e----------eeeEEEEEeCCCCcHHHHHH
Confidence 00 0 0 12467778899999999999
Q ss_pred HHHHhCCceEEEEEEEeeCCeE
Q 014457 241 CALTDLQYVVFHAAISSKGCFA 262 (424)
Q Consensus 241 ~~L~~~gl~I~~A~I~T~~~~a 262 (424)
.+|++.|+||.....+..++.+
T Consensus 91 ~~L~~~~InI~~~~~~~~~~~~ 112 (144)
T 2f06_A 91 GFLSAEGVFIEYMYSFANNNVA 112 (144)
T ss_dssp HHHHHTTCCEEEEEEEEETTEE
T ss_pred HHHHHCCCCEEEEEEEccCCcE
Confidence 9999999999876655233444
No 11
>2ko1_A CTR148A, GTP pyrophosphokinase; homodimer, alpha+beta, transferase, structural genomics, PSI-2, protein structure initiative; NMR {Chlorobaculum tepidum} PDB: 3ibw_A
Probab=97.84 E-value=5.5e-05 Score=59.13 Aligned_cols=49 Identities=16% Similarity=0.315 Sum_probs=41.2
Q ss_pred cEEEEEEeCCcchHHHHHHHHHHHcCceEeeEEEEcCCceEEEEEEEec
Q 014457 81 NTALEVTGVDRPGLMSEISAVLYELGCHVPAAVAWTHKTRAACIFYIED 129 (424)
Q Consensus 81 ~t~iev~~~DRpGLLs~I~~vL~~~~~~I~~A~i~T~~~r~~dvf~V~d 129 (424)
.+.|.|.+.||||+|++|+++|++.|+||.+..+.+.++.+...|.+.-
T Consensus 5 ~~~l~v~~~Dr~G~L~~I~~~la~~~inI~~i~~~~~~~~~~~~i~v~~ 53 (88)
T 2ko1_A 5 LAGIRIVGEDKNGMTNQITGVISKFDTNIRTIVLNAKDGIFTCNLMIFV 53 (88)
T ss_dssp EEEEEEEEECCTTHHHHHHHHHTTSSSCEEEEEEEECSSEEEEEEEEEE
T ss_pred EEEEEEEEECCCcHHHHHHHHHHHCCCCeEEEEEEEcCCEEEEEEEEEE
Confidence 4678999999999999999999999999999999886665555555543
No 12
>2ko1_A CTR148A, GTP pyrophosphokinase; homodimer, alpha+beta, transferase, structural genomics, PSI-2, protein structure initiative; NMR {Chlorobaculum tepidum} PDB: 3ibw_A
Probab=97.79 E-value=9.3e-05 Score=57.78 Aligned_cols=64 Identities=9% Similarity=0.159 Sum_probs=48.6
Q ss_pred ceEEEEEeCCCCchHHHHHHHHHHCCceEEEEEEeecCCceeeEEEEEeCCCCCCChHHHHHHHHHHHh
Q 014457 300 GLRLEICTQNRMGLLSDVTRAFRENGLSVSMAEIGTNGEKATGSFYVMDASGHDVNQRTVELLKQEIGG 368 (424)
Q Consensus 300 ~~~lev~~~DrpGLL~~Itr~l~e~gl~I~~A~i~T~g~~a~d~Fyv~d~~g~~v~~~~~~~lr~~l~~ 368 (424)
.+.|.|.+.||||+|++|+++|+++|+||....+.+.++.+...|.+.-. +...++++.++|.+
T Consensus 5 ~~~l~v~~~Dr~G~L~~I~~~la~~~inI~~i~~~~~~~~~~~~i~v~~~-----~~~~l~~l~~~L~~ 68 (88)
T 2ko1_A 5 LAGIRIVGEDKNGMTNQITGVISKFDTNIRTIVLNAKDGIFTCNLMIFVK-----NTDKLTTLMDKLRK 68 (88)
T ss_dssp EEEEEEEEECCTTHHHHHHHHHTTSSSCEEEEEEEECSSEEEEEEEEEES-----SHHHHHHHHHHHTT
T ss_pred EEEEEEEEECCCcHHHHHHHHHHHCCCCeEEEEEEEcCCEEEEEEEEEEC-----CHHHHHHHHHHHhc
Confidence 36789999999999999999999999999999998876544445544322 23456666666654
No 13
>2re1_A Aspartokinase, alpha and beta subunits; structural genomics, protein structure initiative, midwest center for structural genomics; 2.75A {Neisseria meningitidis MC58}
Probab=97.60 E-value=0.0005 Score=60.92 Aligned_cols=104 Identities=15% Similarity=0.243 Sum_probs=73.4
Q ss_pred CeEEEEEE-ecCChhHHHHHHHHHHhCCceEEEEEEEe-eCCeEEEEEEEeecCCCCCCCHHHHHHHHHHHHHHH---hh
Q 014457 221 GYSVVNIK-CIDRPKLLFDTLCALTDLQYVVFHAAISS-KGCFADQEYFIRQTDGCTLDTESQRQKLTQCLIAAI---ER 295 (424)
Q Consensus 221 ~~tvV~V~-~~DRpgLL~~i~~~L~~~gl~I~~A~I~T-~~~~a~d~F~V~~~~g~~~~~~~~~~~l~~~L~~al---~r 295 (424)
+...|+|. .+|+||.++++...|++.|+||..-.... .+|...-.|+|.. ...++..+.|++.. .-
T Consensus 24 ~~~~i~v~~~~~~~G~~~~if~~La~~~Invd~i~~s~~~~g~~~isf~v~~---------~~~~~a~~~l~~~~~~l~~ 94 (167)
T 2re1_A 24 NQARINVRGVPDKPGVAYQILGAVADANIEVDMIIQNVGSEGTTDFSFTVPR---------GDYKQTLEILSERQDSIGA 94 (167)
T ss_dssp CCEEEEEEEEECCTTHHHHHHHHHHTTTCCCCCEEEC----CEEEEEEEECG---------GGHHHHHHHHHHSSTTTTC
T ss_pred CEEEEEEecCCCCcCHHHHHHHHHHHcCCeEEEEEcCCCCCCeeEEEEEEec---------hHHHHHHHHHHHHHHHcCC
Confidence 56788888 49999999999999999999999876542 2344444577733 12233344454421 10
Q ss_pred -c---CCCceEEEEEeCC---CCchHHHHHHHHHHCCceEEEEEEee
Q 014457 296 -R---VSHGLRLEICTQN---RMGLLSDVTRAFRENGLSVSMAEIGT 335 (424)
Q Consensus 296 -r---~~~~~~lev~~~D---rpGLL~~Itr~l~e~gl~I~~A~i~T 335 (424)
. ......+.|.+.+ +||+++++.++|.++|++|.. ++|
T Consensus 95 ~~i~~~~~~a~vsvvG~~m~~~~Gv~a~i~~aL~~~~InI~~--ist 139 (167)
T 2re1_A 95 ASIDGDDTVCKVSAVGLGMRSHVGVAAKIFRTLAEEGINIQM--IST 139 (167)
T ss_dssp SEEEEESSEEEEEEECSSCTTCCCHHHHHHHHHHHTTCCCCE--EEE
T ss_pred ceEEecCCEEEEEEECCCcCCCcCHHHHHHHHHHHCCCcEEE--EEc
Confidence 0 1124678898887 999999999999999999999 454
No 14
>3obi_A Formyltetrahydrofolate deformylase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.95A {Rhodopseudomonas palustris}
Probab=97.33 E-value=0.0076 Score=58.20 Aligned_cols=105 Identities=10% Similarity=0.077 Sum_probs=69.7
Q ss_pred eEEEEEEecCChhHHHHHHHHHHhCCceEEEEEEEe--eCCeEEEEEEEeecCCCCCCCHHHHHHHHHHHHHHHhh----
Q 014457 222 YSVVNIKCIDRPKLLFDTLCALTDLQYVVFHAAISS--KGCFADQEYFIRQTDGCTLDTESQRQKLTQCLIAAIER---- 295 (424)
Q Consensus 222 ~tvV~V~~~DRpgLL~~i~~~L~~~gl~I~~A~I~T--~~~~a~d~F~V~~~~g~~~~~~~~~~~l~~~L~~al~r---- 295 (424)
..+++|.|+|||||++.|+..|+++|+||.+.+.++ ..|+......+.-+++ .. ..+.|++.|...-++
T Consensus 6 ~~iLtv~g~DrpGIVa~Vs~~La~~g~NI~d~~q~~d~~~g~Ffmr~~~~~~~~-~~----~~~~L~~~f~~la~~~~m~ 80 (288)
T 3obi_A 6 QYVLTLSCPDRAGIVSAVSTFLFENGQNILDAQQYNDTESGHFFMRVVFNAAAK-VI----PLASLRTGFGVIAAKFTMG 80 (288)
T ss_dssp EEEEEEEEECCTTHHHHHHHHHHHTTEEEEEEEEEEETTTTEEEEEEEEEESSC-CC----CHHHHHHHHHHHHHHTTCE
T ss_pred eEEEEEECCCCCCHHHHHHHHHHHCCCcEEeeeeeecCCCCceEEEEEEEcCCC-CC----CHHHHHHHHHHHHHHcCCE
Confidence 468999999999999999999999999999999875 3454333333322222 12 246677777643221
Q ss_pred ----cCCCceEEEEEeCCCCchHHHHHHHHHHCCceEEEE
Q 014457 296 ----RVSHGLRLEICTQNRMGLLSDVTRAFRENGLSVSMA 331 (424)
Q Consensus 296 ----r~~~~~~lev~~~DrpGLL~~Itr~l~e~gl~I~~A 331 (424)
...+..+|-|-.--+---|.++-...++..++++-+
T Consensus 81 ~~l~~~~~~~ri~vl~Sg~g~nl~~ll~~~~~g~l~~~i~ 120 (288)
T 3obi_A 81 WHMRDRETRRKVMLLVSQSDHCLADILYRWRVGDLHMIPT 120 (288)
T ss_dssp EEEEETTSCEEEEEEECSCCHHHHHHHHHHHTTSSCEEEE
T ss_pred EEeeccCCCcEEEEEEcCCCCCHHHHHHHHHCCCCCeEEE
Confidence 122344565555555567888888888777765433
No 15
>3n0v_A Formyltetrahydrofolate deformylase; formyl transferase, ACT domain, structural genomics, joint C structural genomics, JCSG; HET: MSE; 2.25A {Pseudomonas putida}
Probab=97.22 E-value=0.0092 Score=57.52 Aligned_cols=101 Identities=14% Similarity=0.023 Sum_probs=63.8
Q ss_pred eEEEEEEecCChhHHHHHHHHHHhCCceEEEEEEEe--eCCeEEEEEEEeecCCCCCCCHHHHHHHHHHHHHHHhh----
Q 014457 222 YSVVNIKCIDRPKLLFDTLCALTDLQYVVFHAAISS--KGCFADQEYFIRQTDGCTLDTESQRQKLTQCLIAAIER---- 295 (424)
Q Consensus 222 ~tvV~V~~~DRpgLL~~i~~~L~~~gl~I~~A~I~T--~~~~a~d~F~V~~~~g~~~~~~~~~~~l~~~L~~al~r---- 295 (424)
..+++|.|+|||||++.|+..|+++|+||.+.+-++ ..++......+..+.+ . ..+.|++.|.+.-++
T Consensus 8 ~~vLtv~c~DrpGIVa~Vs~~La~~g~NI~d~~q~~d~~~g~Ffmr~~~~~~~~--~----~~~~L~~~f~~la~~l~m~ 81 (286)
T 3n0v_A 8 TWILTADCPSMLGTVDVVTRYLFEQRCYVTEHHSFDDRQSGRFFIRVEFRQPDD--F----DEAGFRAGLAERSEAFGMA 81 (286)
T ss_dssp CEEEEEEEECCTTHHHHHHHHHHHTTCEEEEEEEEEETTTTEEEEEEEEECCSS--C----CHHHHHHHHHHHHGGGTCE
T ss_pred cEEEEEEeCCCCCHHHHHHHHHHHCCCCeeeeeeeccCCCCeeEEEEEEecCCC--C----CHHHHHHHHHHHHHHcCCE
Confidence 468999999999999999999999999999999886 3344322222322221 1 356777777654221
Q ss_pred ----cCCCceEEEEEeCCCCchHHHHHHHHHHCCceE
Q 014457 296 ----RVSHGLRLEICTQNRMGLLSDVTRAFRENGLSV 328 (424)
Q Consensus 296 ----r~~~~~~lev~~~DrpGLL~~Itr~l~e~gl~I 328 (424)
...+..+|-|-.--+---|.++....++..++.
T Consensus 82 ~~l~~~~~~~ri~vl~Sg~g~~l~~ll~~~~~g~l~~ 118 (286)
T 3n0v_A 82 FELTAPNHRPKVVIMVSKADHCLNDLLYRQRIGQLGM 118 (286)
T ss_dssp EEEECTTCCCEEEEEESSCCHHHHHHHHHHHTTSSCC
T ss_pred EEeecCCCCcEEEEEEeCCCCCHHHHHHHHHCCCCCc
Confidence 112233444444444446777777766655543
No 16
>3o1l_A Formyltetrahydrofolate deformylase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 2.20A {Pseudomonas syringae PV}
Probab=97.22 E-value=0.007 Score=58.81 Aligned_cols=102 Identities=14% Similarity=0.114 Sum_probs=64.0
Q ss_pred eEEEEEEecCChhHHHHHHHHHHhCCceEEEEEEEee--CCeEEEEEEEeecCCCCCCCHHHHHHHHHHHHHHHhh----
Q 014457 222 YSVVNIKCIDRPKLLFDTLCALTDLQYVVFHAAISSK--GCFADQEYFIRQTDGCTLDTESQRQKLTQCLIAAIER---- 295 (424)
Q Consensus 222 ~tvV~V~~~DRpgLL~~i~~~L~~~gl~I~~A~I~T~--~~~a~d~F~V~~~~g~~~~~~~~~~~l~~~L~~al~r---- 295 (424)
..+++|.|+|||||++.|+..|+++|+||.+++-++. .|+......+..+.+ .. ..+.|++.|...-++
T Consensus 22 ~~iLtv~c~DrpGIVa~VS~~La~~g~NI~d~~q~~d~~~g~FfMr~~~~~~~~-~~----~~~~L~~~l~~la~~l~m~ 96 (302)
T 3o1l_A 22 TFRLVIACPDRVGIVAKVSNFLASHNGWITEASHHSDNLSGWFFMRHEIRADTL-PF----DLDGFREAFTPIAEEFSMD 96 (302)
T ss_dssp EEEEEEEEECCTTHHHHHHHHHHHTTCCEEEEEEEEETTTTEEEEEEEEEGGGS-SS----CHHHHHHHHHHHHHHHTCE
T ss_pred eEEEEEECCCCCCHHHHHHHHHHHCCCCEEEeeEEecCCCCeEEEEEEEecCCC-CC----CHHHHHHHHHHHHHHhCCe
Confidence 4689999999999999999999999999999998874 454333333322221 11 346677776543211
Q ss_pred ----cCCCceEEEEEeCCCCchHHHHHHHHHHCCceE
Q 014457 296 ----RVSHGLRLEICTQNRMGLLSDVTRAFRENGLSV 328 (424)
Q Consensus 296 ----r~~~~~~lev~~~DrpGLL~~Itr~l~e~gl~I 328 (424)
...+..++-|-.--+---|.++....+...++.
T Consensus 97 ~~l~~~~~~~ri~vl~Sg~g~nl~~ll~~~~~g~l~~ 133 (302)
T 3o1l_A 97 WRITDSAQKKRVVLMASRESHCLADLLHRWHSDELDC 133 (302)
T ss_dssp EEEEETTSCCEEEEEECSCCHHHHHHHHHHHTTCSCS
T ss_pred eeecccCCCcEEEEEEeCCchhHHHHHHHHHCCCCCc
Confidence 112233444444444446777777776665543
No 17
>2dtj_A Aspartokinase; protein-ligand complex, regulatory subunit, transferase; HET: CIT; 1.58A {Corynebacterium glutamicum} PDB: 3aaw_B* 3ab2_B 3ab4_B*
Probab=97.18 E-value=0.0029 Score=56.59 Aligned_cols=131 Identities=14% Similarity=0.159 Sum_probs=83.4
Q ss_pred CCeEEEEEE-ecCChhHHHHHHHHHHhCCceEEEEEEEee---CCeEEEEEEEeecCCCCCCCHHHHHHHHHHHHHHHhh
Q 014457 220 KGYSVVNIK-CIDRPKLLFDTLCALTDLQYVVFHAAISSK---GCFADQEYFIRQTDGCTLDTESQRQKLTQCLIAAIER 295 (424)
Q Consensus 220 ~~~tvV~V~-~~DRpgLL~~i~~~L~~~gl~I~~A~I~T~---~~~a~d~F~V~~~~g~~~~~~~~~~~l~~~L~~al~r 295 (424)
++.+.|+|. .+|+||.++++...|++.|+||.....++. ++...-.|.+.. +..++..+.|++....
T Consensus 13 ~~~~~Itv~~~~~~~G~~a~if~~La~~~InId~i~~s~~~~~~~~~~isf~v~~---------~d~~~a~~~l~~~~~~ 83 (178)
T 2dtj_A 13 KSEAKVTVLGISDKPGEAAKVFRALADAEINIDMVLQNVSSVEDGTTDITFTCPR---------SDGRRAMEILKKLQVQ 83 (178)
T ss_dssp CSEEEEEEEEEECSTTHHHHHHHHHHHTTCCCCEEEECCCCTTTCEEEEEEEEEH---------HHHHHHHHHHHTTTTT
T ss_pred CCEEEEEEecCCCCccHHHHHHHHHHHcCCCEEEEEcCCCCCCCCceEEEEEEcc---------ccHHHHHHHHHHHHHh
Confidence 356788884 699999999999999999999988766543 333323466633 2334444445442111
Q ss_pred -c------CCCceEEEEEeC---CCCchHHHHHHHHHHCCceEEEEEEeecCCceeeEEEEEeCCCCCCChHHHHHHHHH
Q 014457 296 -R------VSHGLRLEICTQ---NRMGLLSDVTRAFRENGLSVSMAEIGTNGEKATGSFYVMDASGHDVNQRTVELLKQE 365 (424)
Q Consensus 296 -r------~~~~~~lev~~~---DrpGLL~~Itr~l~e~gl~I~~A~i~T~g~~a~d~Fyv~d~~g~~v~~~~~~~lr~~ 365 (424)
. .++...+.|.+. ++||+++++.++|.+.|+||.. |+|.. ..=.|.| +.. - ..+.++.|.++
T Consensus 84 ~~~~~v~~~~~~a~VsvVG~gm~~~~Gv~arif~aLa~~~InI~~--istSe--~~Is~vV-~~~--d-~~~Av~~Lh~~ 155 (178)
T 2dtj_A 84 GNWTNVLYDDQVGKVSLVGAGMKSHPGVTAEFMEALRDVNVNIEL--ISTSE--IRISVLI-RED--D-LDAAARALHEQ 155 (178)
T ss_dssp TTCSEEEEESCEEEEEEEEECCTTCHHHHHHHHHHHHHTTCCCCE--EEEET--TEEEEEE-EGG--G-HHHHHHHHHHH
T ss_pred cCCCeEEEeCCeEEEEEEcCCcccCccHHHHHHHHHHHCCCCEEE--EEcCC--CeEEEEE-eHH--H-HHHHHHHHHHH
Confidence 0 112456777776 8999999999999999999999 44432 2224555 321 0 01355666666
Q ss_pred HH
Q 014457 366 IG 367 (424)
Q Consensus 366 l~ 367 (424)
|.
T Consensus 156 F~ 157 (178)
T 2dtj_A 156 FQ 157 (178)
T ss_dssp HT
T ss_pred Hc
Confidence 54
No 18
>2re1_A Aspartokinase, alpha and beta subunits; structural genomics, protein structure initiative, midwest center for structural genomics; 2.75A {Neisseria meningitidis MC58}
Probab=97.15 E-value=0.023 Score=50.07 Aligned_cols=112 Identities=12% Similarity=0.115 Sum_probs=74.2
Q ss_pred CCCcEEEEEEe-CCcchHHHHHHHHHHHcCceEeeEEEEc-CCceEEEEEEEecCCCCCCCCcHHHHHHHHHHHHHHHcc
Q 014457 78 STENTALEVTG-VDRPGLMSEISAVLYELGCHVPAAVAWT-HKTRAACIFYIEDGLEGRPITAPEMLAHVEEQLEIVVGA 155 (424)
Q Consensus 78 ~~~~t~iev~~-~DRpGLLs~I~~vL~~~~~~I~~A~i~T-~~~r~~dvf~V~d~~~g~~i~d~~~~~~i~~~L~~~L~~ 155 (424)
..+.+.|+|.+ +|+||.+++|+.+|+++|+||..-.... .+|...-.|.|... ++++ .++.|.+ +..
T Consensus 22 ~~~~~~i~v~~~~~~~G~~~~if~~La~~~Invd~i~~s~~~~g~~~isf~v~~~-------~~~~---a~~~l~~-~~~ 90 (167)
T 2re1_A 22 DKNQARINVRGVPDKPGVAYQILGAVADANIEVDMIIQNVGSEGTTDFSFTVPRG-------DYKQ---TLEILSE-RQD 90 (167)
T ss_dssp ECCCEEEEEEEEECCTTHHHHHHHHHHTTTCCCCCEEEC----CEEEEEEEECGG-------GHHH---HHHHHHH-SST
T ss_pred cCCEEEEEEecCCCCcCHHHHHHHHHHHcCCeEEEEEcCCCCCCeeEEEEEEech-------HHHH---HHHHHHH-HHH
Confidence 44578889985 9999999999999999999998765432 34444556666541 2222 2233322 111
Q ss_pred CCCCCccceeeccCCCCCCcchhhhhhhhhhcccccccccCCCCCCCCCCCCCccEEEEeecCCCCeEEEEEEecC---C
Q 014457 156 HHGEGETRSVRLTTPMPGRTHTERRLHQLMYADRDYELCRGCDGGAGHWNGCTRTHVLIDSCKEKGYSVVNIKCID---R 232 (424)
Q Consensus 156 ~~~~~~~~~~~~~~~~~g~~h~errl~q~m~~~~~~~~~~~~~~~~~~~~~~~~p~V~v~~~~~~~~tvV~V~~~D---R 232 (424)
+ +. + ..|.+ .++...|.|.+.+ +
T Consensus 91 ~------------------------l~--------~------------------~~i~~----~~~~a~vsvvG~~m~~~ 116 (167)
T 2re1_A 91 S------------------------IG--------A------------------ASIDG----DDTVCKVSAVGLGMRSH 116 (167)
T ss_dssp T------------------------TT--------C------------------SEEEE----ESSEEEEEEECSSCTTC
T ss_pred H------------------------cC--------C------------------ceEEe----cCCEEEEEEECCCcCCC
Confidence 1 00 0 11222 1357889999876 9
Q ss_pred hhHHHHHHHHHHhCCceEEEEE
Q 014457 233 PKLLFDTLCALTDLQYVVFHAA 254 (424)
Q Consensus 233 pgLL~~i~~~L~~~gl~I~~A~ 254 (424)
||+++++..+|++.|+||....
T Consensus 117 ~Gv~a~i~~aL~~~~InI~~is 138 (167)
T 2re1_A 117 VGVAAKIFRTLAEEGINIQMIS 138 (167)
T ss_dssp CCHHHHHHHHHHHTTCCCCEEE
T ss_pred cCHHHHHHHHHHHCCCcEEEEE
Confidence 9999999999999999999843
No 19
>3lou_A Formyltetrahydrofolate deformylase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative hydrolase; HET: MSE; 1.90A {Burkholderia mallei}
Probab=97.08 E-value=0.015 Score=56.23 Aligned_cols=104 Identities=14% Similarity=0.102 Sum_probs=64.0
Q ss_pred eEEEEEEecCChhHHHHHHHHHHhCCceEEEEEEEe--eCCeEEEEEEEeec-CCCCCCCHHHHHHHHHHHHHHHhh---
Q 014457 222 YSVVNIKCIDRPKLLFDTLCALTDLQYVVFHAAISS--KGCFADQEYFIRQT-DGCTLDTESQRQKLTQCLIAAIER--- 295 (424)
Q Consensus 222 ~tvV~V~~~DRpgLL~~i~~~L~~~gl~I~~A~I~T--~~~~a~d~F~V~~~-~g~~~~~~~~~~~l~~~L~~al~r--- 295 (424)
..+++|.|+|||||++.|+..|+++|+||.+.+-++ ..|+......+..+ .+... ..+.|++.|.+.-++
T Consensus 10 ~~vLtv~c~Dr~GIVa~Vs~~La~~g~NI~d~~q~~d~~~g~Ffmr~~~~~~~~~~~~----~~~~L~~~f~~la~~~~m 85 (292)
T 3lou_A 10 QFVLTLSCPSAAGQVAAVVGLLDRHRCYVDELTVFDDDLSARFFVRCVFHATDDADAL----RVDALRREFEPIAERFRM 85 (292)
T ss_dssp EEEEEEEEESCSCHHHHHHHHHHHTTEEEEEEEEEEETTTTEEEEEEEEEECC----C----CHHHHHHHHHHHHHHHTC
T ss_pred cEEEEEEcCCCCCHHHHHHHHHHHCCCCEEeeEEEecCCCCceEEEEEEEccCcccCC----CHHHHHHHHHHHHHhcCc
Confidence 468999999999999999999999999999999986 33443222222111 01011 346677777543211
Q ss_pred -----cCCCceEEEEEeCCCCchHHHHHHHHHHCCceEE
Q 014457 296 -----RVSHGLRLEICTQNRMGLLSDVTRAFRENGLSVS 329 (424)
Q Consensus 296 -----r~~~~~~lev~~~DrpGLL~~Itr~l~e~gl~I~ 329 (424)
...+..++-|..--+---|.++-...++..+++.
T Consensus 86 ~~~l~~~~~~~ri~vl~Sg~g~~l~~ll~~~~~g~l~~~ 124 (292)
T 3lou_A 86 QWAIHDVAARPKVLIMVSKLEHCLADLLFRWKMGELKMD 124 (292)
T ss_dssp EEEEEETTSCCEEEEEECSCCHHHHHHHHHHHHTSSCCE
T ss_pred EEEeeccCCCCEEEEEEcCCCcCHHHHHHHHHcCCCCcE
Confidence 1122334444444444467777777777666443
No 20
>3obi_A Formyltetrahydrofolate deformylase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.95A {Rhodopseudomonas palustris}
Probab=97.04 E-value=0.0024 Score=61.75 Aligned_cols=65 Identities=20% Similarity=0.287 Sum_probs=48.7
Q ss_pred cEEEEEEeCCcchHHHHHHHHHHHcCceEeeEEEEc--CCceEEEEEEEecCCCCCCCCcHHHHHHHHHHHHH
Q 014457 81 NTALEVTGVDRPGLMSEISAVLYELGCHVPAAVAWT--HKTRAACIFYIEDGLEGRPITAPEMLAHVEEQLEI 151 (424)
Q Consensus 81 ~t~iev~~~DRpGLLs~I~~vL~~~~~~I~~A~i~T--~~~r~~dvf~V~d~~~g~~i~d~~~~~~i~~~L~~ 151 (424)
..+|++.|+||||+.+.|++.|+++||||.+...++ ..+++.-.+.+.-+ .. .. ..+.|++.|..
T Consensus 6 ~~iLtv~g~DrpGIVa~Vs~~La~~g~NI~d~~q~~d~~~g~Ffmr~~~~~~-~~-~~----~~~~L~~~f~~ 72 (288)
T 3obi_A 6 QYVLTLSCPDRAGIVSAVSTFLFENGQNILDAQQYNDTESGHFFMRVVFNAA-AK-VI----PLASLRTGFGV 72 (288)
T ss_dssp EEEEEEEEECCTTHHHHHHHHHHHTTEEEEEEEEEEETTTTEEEEEEEEEES-SC-CC----CHHHHHHHHHH
T ss_pred eEEEEEECCCCCCHHHHHHHHHHHCCCcEEeeeeeecCCCCceEEEEEEEcC-CC-CC----CHHHHHHHHHH
Confidence 468999999999999999999999999999999874 56776655555432 21 12 23667777754
No 21
>3n0v_A Formyltetrahydrofolate deformylase; formyl transferase, ACT domain, structural genomics, joint C structural genomics, JCSG; HET: MSE; 2.25A {Pseudomonas putida}
Probab=96.97 E-value=0.003 Score=60.99 Aligned_cols=65 Identities=14% Similarity=0.095 Sum_probs=49.0
Q ss_pred cEEEEEEeCCcchHHHHHHHHHHHcCceEeeEEEEc--CCceEEEEEEEecCCCCCCCCcHHHHHHHHHHHHHH
Q 014457 81 NTALEVTGVDRPGLMSEISAVLYELGCHVPAAVAWT--HKTRAACIFYIEDGLEGRPITAPEMLAHVEEQLEIV 152 (424)
Q Consensus 81 ~t~iev~~~DRpGLLs~I~~vL~~~~~~I~~A~i~T--~~~r~~dvf~V~d~~~g~~i~d~~~~~~i~~~L~~~ 152 (424)
..+|++.|+||||+.+.|++.|+++||||.+...++ ..+++.-...+.-+ . .. ..+.|++.|...
T Consensus 8 ~~vLtv~c~DrpGIVa~Vs~~La~~g~NI~d~~q~~d~~~g~Ffmr~~~~~~-~--~~----~~~~L~~~f~~l 74 (286)
T 3n0v_A 8 TWILTADCPSMLGTVDVVTRYLFEQRCYVTEHHSFDDRQSGRFFIRVEFRQP-D--DF----DEAGFRAGLAER 74 (286)
T ss_dssp CEEEEEEEECCTTHHHHHHHHHHHTTCEEEEEEEEEETTTTEEEEEEEEECC-S--SC----CHHHHHHHHHHH
T ss_pred cEEEEEEeCCCCCHHHHHHHHHHHCCCCeeeeeeeccCCCCeeEEEEEEecC-C--CC----CHHHHHHHHHHH
Confidence 478999999999999999999999999999999885 56666555444432 2 12 236777777543
No 22
>2f1f_A Acetolactate synthase isozyme III small subunit; ferredoxin fold, ACT domain, transferase; HET: P33 1PE; 1.75A {Escherichia coli} SCOP: d.58.18.6 d.58.18.6
Probab=96.95 E-value=0.0018 Score=57.33 Aligned_cols=63 Identities=14% Similarity=0.279 Sum_probs=49.5
Q ss_pred eEEEEEeCCCCchHHHHHHHHHHCCceEEEEEEeecCC--ceeeEEEEEeCCCCCCChHHHHHHHHHHHhh
Q 014457 301 LRLEICTQNRMGLLSDVTRAFRENGLSVSMAEIGTNGE--KATGSFYVMDASGHDVNQRTVELLKQEIGGS 369 (424)
Q Consensus 301 ~~lev~~~DrpGLL~~Itr~l~e~gl~I~~A~i~T~g~--~a~d~Fyv~d~~g~~v~~~~~~~lr~~l~~~ 369 (424)
+.|.|...||||+|++|+.+|+++|+||.+..+.+..+ ...=+|.+. . . +..+++|.+++.+.
T Consensus 4 ~~IsV~v~NrpGvLarIt~lfs~rg~NI~Sl~v~~t~d~~~sriti~V~-~--d---~~~leqI~kqL~Kl 68 (164)
T 2f1f_A 4 RILSVLLENESGALSRVIGLFSQRGYNIESLTVAPTDDPTLSRMTIQTV-G--D---EKVLEQIEKQLHKL 68 (164)
T ss_dssp EEEEEEEECCTTHHHHHHHHHHTTTCCCSEEEEEECSCSSEEEEEEEEE-S--C---HHHHHHHHHHHHHS
T ss_pred EEEEEEEeCCCcHHHHHHHHHHHCCCCeeeceeeecCCCCEEEEEEEEe-c--c---HHHHHHHHHHHcCC
Confidence 57899999999999999999999999999998875443 244455553 2 1 56888999998873
No 23
>3lou_A Formyltetrahydrofolate deformylase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative hydrolase; HET: MSE; 1.90A {Burkholderia mallei}
Probab=96.93 E-value=0.0026 Score=61.55 Aligned_cols=67 Identities=10% Similarity=0.153 Sum_probs=47.4
Q ss_pred cEEEEEEeCCcchHHHHHHHHHHHcCceEeeEEEEc--CCceEEEEEEEecCCCCCCCCcHHHHHHHHHHHHH
Q 014457 81 NTALEVTGVDRPGLMSEISAVLYELGCHVPAAVAWT--HKTRAACIFYIEDGLEGRPITAPEMLAHVEEQLEI 151 (424)
Q Consensus 81 ~t~iev~~~DRpGLLs~I~~vL~~~~~~I~~A~i~T--~~~r~~dvf~V~d~~~g~~i~d~~~~~~i~~~L~~ 151 (424)
..+|++.|+||||+.++|++.|+++||||.+..-++ ..+++.-...+.-+...... ..+.|++.|..
T Consensus 10 ~~vLtv~c~Dr~GIVa~Vs~~La~~g~NI~d~~q~~d~~~g~Ffmr~~~~~~~~~~~~----~~~~L~~~f~~ 78 (292)
T 3lou_A 10 QFVLTLSCPSAAGQVAAVVGLLDRHRCYVDELTVFDDDLSARFFVRCVFHATDDADAL----RVDALRREFEP 78 (292)
T ss_dssp EEEEEEEEESCSCHHHHHHHHHHHTTEEEEEEEEEEETTTTEEEEEEEEEECC----C----CHHHHHHHHHH
T ss_pred cEEEEEEcCCCCCHHHHHHHHHHHCCCCEEeeEEEecCCCCceEEEEEEEccCcccCC----CHHHHHHHHHH
Confidence 468999999999999999999999999999999885 56666544444321001011 23667777644
No 24
>3nrb_A Formyltetrahydrofolate deformylase; N-terminal ACT domain, structural genomics, joint center for structural genomics, JCSG; HET: MSE FLC; 2.05A {Pseudomonas putida}
Probab=96.92 E-value=0.022 Score=54.88 Aligned_cols=102 Identities=12% Similarity=0.083 Sum_probs=64.6
Q ss_pred CeEEEEEEecCChhHHHHHHHHHHhCCceEEEEEEEe--eCCeEEEEEEEeecCCCCCCCHHHHHHHHHHHHHHHhh---
Q 014457 221 GYSVVNIKCIDRPKLLFDTLCALTDLQYVVFHAAISS--KGCFADQEYFIRQTDGCTLDTESQRQKLTQCLIAAIER--- 295 (424)
Q Consensus 221 ~~tvV~V~~~DRpgLL~~i~~~L~~~gl~I~~A~I~T--~~~~a~d~F~V~~~~g~~~~~~~~~~~l~~~L~~al~r--- 295 (424)
...+++|.|+|||||++.|+..|+++|+||.+.+.++ ..|+......+ +..+ . ..+.|++.|...-++
T Consensus 6 ~~~vLtv~c~Dr~GIVa~Vs~~La~~g~NI~d~~q~~d~~~g~Ffmr~~~-~~~~--~----~~~~L~~~f~~la~~~~m 78 (287)
T 3nrb_A 6 NQYVLSLACQDAPGIVSEVSTFLFNNGANIVEAEQFNDEDSSKFFMRVSV-EIPV--A----GVNDFNSAFGKVVEKYNA 78 (287)
T ss_dssp TEEEEEEEEECCTTHHHHHHHHHHHTTCEEEEEEEEEETTTTEEEEEEEE-ECCC---------CHHHHHHHHHHGGGTC
T ss_pred CeEEEEEECCCCCCHHHHHHHHHHHCCCCEEeeeeeecCCCCeEEEEEEE-EcCC--C----CHHHHHHHHHHHHHHcCC
Confidence 3579999999999999999999999999999999975 34433222222 1111 1 123566666543221
Q ss_pred -----cCCCceEEEEEeCCCCchHHHHHHHHHHCCceEE
Q 014457 296 -----RVSHGLRLEICTQNRMGLLSDVTRAFRENGLSVS 329 (424)
Q Consensus 296 -----r~~~~~~lev~~~DrpGLL~~Itr~l~e~gl~I~ 329 (424)
...+..++-|-.--+---|.++....++..+++.
T Consensus 79 ~~~l~~~~~~~ri~vl~Sg~g~nl~~ll~~~~~g~l~~~ 117 (287)
T 3nrb_A 79 EWWFRPRTDRKKVVIMVSKFDHCLGDLLYRHRLGELDME 117 (287)
T ss_dssp EEEEEETTCCCEEEEEECSCCHHHHHHHHHHHHTSSCCE
T ss_pred eeEeeccCCCcEEEEEEeCCCcCHHHHHHHHHCCCCCeE
Confidence 1122344555444444577888888877766543
No 25
>2dt9_A Aspartokinase; protein-ligand complex, regulatory subunit, transferase; 2.15A {Thermus thermophilus} PDB: 2zho_A
Probab=96.92 E-value=0.0061 Score=53.75 Aligned_cols=103 Identities=12% Similarity=0.098 Sum_probs=70.8
Q ss_pred CCeEEEEEEe-cCChhHHHHHHHHHHhCCceEEEEEEEee---CCeEEEEEEEeecCCCCCCCHHHHHHHHHHHHH---H
Q 014457 220 KGYSVVNIKC-IDRPKLLFDTLCALTDLQYVVFHAAISSK---GCFADQEYFIRQTDGCTLDTESQRQKLTQCLIA---A 292 (424)
Q Consensus 220 ~~~tvV~V~~-~DRpgLL~~i~~~L~~~gl~I~~A~I~T~---~~~a~d~F~V~~~~g~~~~~~~~~~~l~~~L~~---a 292 (424)
++.+.|+|.+ +|+||.++++..+|++.|+||..-..... .|...-.|.|... ..++..+.|++ .
T Consensus 14 ~~~a~Itv~g~~~~~G~~a~if~~La~~~InVd~I~q~~~~~~~g~~~isf~V~~~---------d~~~a~~~L~~~~~~ 84 (167)
T 2dt9_A 14 LDHAQIGLIGIPDQPGIAAKVFQALAERGIAVDMIIQGVPGHDPSRQQMAFTVKKD---------FAQEALEALEPVLAE 84 (167)
T ss_dssp CSEEEEEEEEEECSTTHHHHHHHHHHHHTCCCSCEEBCCCCSCTTEEEEEEEEEGG---------GHHHHHHHHHHHHHH
T ss_pred CCEEEEEEecCCCCCCHHHHHHHHHHHcCCcEEEEEcCCCCCCCCceEEEEEEehH---------HHHHHHHHHHHHHHH
Confidence 3677888876 89999999999999999999988554321 2344445777432 12222333333 2
Q ss_pred Hhhc---CCCceEEEEEeCC---CCchHHHHHHHHHHCCceEEEE
Q 014457 293 IERR---VSHGLRLEICTQN---RMGLLSDVTRAFRENGLSVSMA 331 (424)
Q Consensus 293 l~rr---~~~~~~lev~~~D---rpGLL~~Itr~l~e~gl~I~~A 331 (424)
+.-. .+....+.|.+.+ +||+++++.++|.+.|+||...
T Consensus 85 ~~~~v~~~~~~a~vsvVG~gm~~~~Gv~a~~f~aL~~~~InI~~i 129 (167)
T 2dt9_A 85 IGGEAILRPDIAKVSIVGVGLASTPEVPAKMFQAVASTGANIEMI 129 (167)
T ss_dssp HCCEEEEECSEEEEEEEESSGGGSTHHHHHHHHHHHHTTCCCCEE
T ss_pred hCCcEEEeCCEEEEEEECCCcccCcCHHHHHHHHHHHCCCCEEEE
Confidence 2211 1124568888876 9999999999999999999663
No 26
>3nrb_A Formyltetrahydrofolate deformylase; N-terminal ACT domain, structural genomics, joint center for structural genomics, JCSG; HET: MSE FLC; 2.05A {Pseudomonas putida}
Probab=96.90 E-value=0.0026 Score=61.40 Aligned_cols=64 Identities=17% Similarity=0.263 Sum_probs=46.8
Q ss_pred CcEEEEEEeCCcchHHHHHHHHHHHcCceEeeEEEEc--CCceEEEEEEEecCCCCCCCCcHHHHHHHHHHHHH
Q 014457 80 ENTALEVTGVDRPGLMSEISAVLYELGCHVPAAVAWT--HKTRAACIFYIEDGLEGRPITAPEMLAHVEEQLEI 151 (424)
Q Consensus 80 ~~t~iev~~~DRpGLLs~I~~vL~~~~~~I~~A~i~T--~~~r~~dvf~V~d~~~g~~i~d~~~~~~i~~~L~~ 151 (424)
...+|++.|+||||+.+.|++.|+++||||.+...++ ..+++.-...+.- .+ . .++.|++.|..
T Consensus 6 ~~~vLtv~c~Dr~GIVa~Vs~~La~~g~NI~d~~q~~d~~~g~Ffmr~~~~~--~~--~----~~~~L~~~f~~ 71 (287)
T 3nrb_A 6 NQYVLSLACQDAPGIVSEVSTFLFNNGANIVEAEQFNDEDSSKFFMRVSVEI--PV--A----GVNDFNSAFGK 71 (287)
T ss_dssp TEEEEEEEEECCTTHHHHHHHHHHHTTCEEEEEEEEEETTTTEEEEEEEEEC--CC---------CHHHHHHHH
T ss_pred CeEEEEEECCCCCCHHHHHHHHHHHCCCCEEeeeeeecCCCCeEEEEEEEEc--CC--C----CHHHHHHHHHH
Confidence 4578999999999999999999999999999999874 5666655444432 11 1 12466777644
No 27
>3o1l_A Formyltetrahydrofolate deformylase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 2.20A {Pseudomonas syringae PV}
Probab=96.90 E-value=0.0023 Score=62.20 Aligned_cols=65 Identities=17% Similarity=0.134 Sum_probs=48.3
Q ss_pred cEEEEEEeCCcchHHHHHHHHHHHcCceEeeEEEEcC--CceEEEEEEEecCCCCCCCCcHHHHHHHHHHHHH
Q 014457 81 NTALEVTGVDRPGLMSEISAVLYELGCHVPAAVAWTH--KTRAACIFYIEDGLEGRPITAPEMLAHVEEQLEI 151 (424)
Q Consensus 81 ~t~iev~~~DRpGLLs~I~~vL~~~~~~I~~A~i~T~--~~r~~dvf~V~d~~~g~~i~d~~~~~~i~~~L~~ 151 (424)
..+|++.|+||||+.+.|++.|+++||||.++..++. .+++.-.+.+.-+ .+ .. ..+.|++.|..
T Consensus 22 ~~iLtv~c~DrpGIVa~VS~~La~~g~NI~d~~q~~d~~~g~FfMr~~~~~~-~~-~~----~~~~L~~~l~~ 88 (302)
T 3o1l_A 22 TFRLVIACPDRVGIVAKVSNFLASHNGWITEASHHSDNLSGWFFMRHEIRAD-TL-PF----DLDGFREAFTP 88 (302)
T ss_dssp EEEEEEEEECCTTHHHHHHHHHHHTTCCEEEEEEEEETTTTEEEEEEEEEGG-GS-SS----CHHHHHHHHHH
T ss_pred eEEEEEECCCCCCHHHHHHHHHHHCCCCEEEeeEEecCCCCeEEEEEEEecC-CC-CC----CHHHHHHHHHH
Confidence 4689999999999999999999999999999998863 6766555544431 11 12 23666777644
No 28
>2dtj_A Aspartokinase; protein-ligand complex, regulatory subunit, transferase; HET: CIT; 1.58A {Corynebacterium glutamicum} PDB: 3aaw_B* 3ab2_B 3ab4_B*
Probab=96.86 E-value=0.073 Score=47.34 Aligned_cols=139 Identities=14% Similarity=0.152 Sum_probs=84.6
Q ss_pred CCCcEEEEEE-eCCcchHHHHHHHHHHHcCceEeeEEEEcC---CceEEEEEEEecCCCCCCCCcHHHHHHHHHHHHHHH
Q 014457 78 STENTALEVT-GVDRPGLMSEISAVLYELGCHVPAAVAWTH---KTRAACIFYIEDGLEGRPITAPEMLAHVEEQLEIVV 153 (424)
Q Consensus 78 ~~~~t~iev~-~~DRpGLLs~I~~vL~~~~~~I~~A~i~T~---~~r~~dvf~V~d~~~g~~i~d~~~~~~i~~~L~~~L 153 (424)
..+.+.|+|. .+|+||.+++|+..|++.|+||..-...+. ++...-.|.+... +. ++..+.|.+ +
T Consensus 12 ~~~~~~Itv~~~~~~~G~~a~if~~La~~~InId~i~~s~~~~~~~~~~isf~v~~~-------d~---~~a~~~l~~-~ 80 (178)
T 2dtj_A 12 DKSEAKVTVLGISDKPGEAAKVFRALADAEINIDMVLQNVSSVEDGTTDITFTCPRS-------DG---RRAMEILKK-L 80 (178)
T ss_dssp ECSEEEEEEEEEECSTTHHHHHHHHHHHTTCCCCEEEECCCCTTTCEEEEEEEEEHH-------HH---HHHHHHHHT-T
T ss_pred cCCEEEEEEecCCCCccHHHHHHHHHHHcCCCEEEEEcCCCCCCCCceEEEEEEccc-------cH---HHHHHHHHH-H
Confidence 3456788884 699999999999999999999987766654 3333333666441 11 222222211 1
Q ss_pred ccCCCCCccceeeccCCCCCCcchhhhhhhhhhcccccccccCCCCCCCCCCCCCccEEEEeecCCCCeEEEEEEec---
Q 014457 154 GAHHGEGETRSVRLTTPMPGRTHTERRLHQLMYADRDYELCRGCDGGAGHWNGCTRTHVLIDSCKEKGYSVVNIKCI--- 230 (424)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~g~~h~errl~q~m~~~~~~~~~~~~~~~~~~~~~~~~p~V~v~~~~~~~~tvV~V~~~--- 230 (424)
..+ +. ...|.+. .+...|.|.+.
T Consensus 81 ~~~------------------------~~--------------------------~~~v~~~----~~~a~VsvVG~gm~ 106 (178)
T 2dtj_A 81 QVQ------------------------GN--------------------------WTNVLYD----DQVGKVSLVGAGMK 106 (178)
T ss_dssp TTT------------------------TT--------------------------CSEEEEE----SCEEEEEEEEECCT
T ss_pred HHh------------------------cC--------------------------CCeEEEe----CCeEEEEEEcCCcc
Confidence 110 00 0112221 24678888876
Q ss_pred CChhHHHHHHHHHHhCCceEEEEEEEeeCCeEEEEEEEeecCCCCCCCHHHHHHHHHHHHHHHh
Q 014457 231 DRPKLLFDTLCALTDLQYVVFHAAISSKGCFADQEYFIRQTDGCTLDTESQRQKLTQCLIAAIE 294 (424)
Q Consensus 231 DRpgLL~~i~~~L~~~gl~I~~A~I~T~~~~a~d~F~V~~~~g~~~~~~~~~~~l~~~L~~al~ 294 (424)
+.||+++++..+|++.|+||..-. |..-. -.|.|.. +..++..+.|.+++.
T Consensus 107 ~~~Gv~arif~aLa~~~InI~~is--tSe~~--Is~vV~~---------~d~~~Av~~Lh~~F~ 157 (178)
T 2dtj_A 107 SHPGVTAEFMEALRDVNVNIELIS--TSEIR--ISVLIRE---------DDLDAAARALHEQFQ 157 (178)
T ss_dssp TCHHHHHHHHHHHHHTTCCCCEEE--EETTE--EEEEEEG---------GGHHHHHHHHHHHHT
T ss_pred cCccHHHHHHHHHHHCCCCEEEEE--cCCCe--EEEEEeH---------HHHHHHHHHHHHHHc
Confidence 899999999999999999998843 42221 1244422 344555566666653
No 29
>2f1f_A Acetolactate synthase isozyme III small subunit; ferredoxin fold, ACT domain, transferase; HET: P33 1PE; 1.75A {Escherichia coli} SCOP: d.58.18.6 d.58.18.6
Probab=96.82 E-value=0.0038 Score=55.31 Aligned_cols=63 Identities=16% Similarity=0.221 Sum_probs=49.4
Q ss_pred EEEEEEeCCcchHHHHHHHHHHHcCceEeeEEEEc-CC-ceEEEEEEEecCCCCCCCCcHHHHHHHHHHHHHH
Q 014457 82 TALEVTGVDRPGLMSEISAVLYELGCHVPAAVAWT-HK-TRAACIFYIEDGLEGRPITAPEMLAHVEEQLEIV 152 (424)
Q Consensus 82 t~iev~~~DRpGLLs~I~~vL~~~~~~I~~A~i~T-~~-~r~~dvf~V~d~~~g~~i~d~~~~~~i~~~L~~~ 152 (424)
..|.|...||||+|++|+++|++.|+||.+..+.+ .+ +...-.|.|.. +.+.+++|.++|.+.
T Consensus 4 ~~IsV~v~NrpGvLarIt~lfs~rg~NI~Sl~v~~t~d~~~sriti~V~~--------d~~~leqI~kqL~Kl 68 (164)
T 2f1f_A 4 RILSVLLENESGALSRVIGLFSQRGYNIESLTVAPTDDPTLSRMTIQTVG--------DEKVLEQIEKQLHKL 68 (164)
T ss_dssp EEEEEEEECCTTHHHHHHHHHHTTTCCCSEEEEEECSCSSEEEEEEEEES--------CHHHHHHHHHHHHHS
T ss_pred EEEEEEEeCCCcHHHHHHHHHHHCCCCeeeceeeecCCCCEEEEEEEEec--------cHHHHHHHHHHHcCC
Confidence 57899999999999999999999999999988875 43 55555665543 245778888887653
No 30
>2jhe_A Transcription regulator TYRR; aromatic hydrocarbons catabolism, TYRR protei nucleotide-binding, transcription regulation, activator; HET: PG4; 2.30A {Escherichia coli}
Probab=96.76 E-value=0.0053 Score=53.83 Aligned_cols=59 Identities=25% Similarity=0.398 Sum_probs=44.2
Q ss_pred EEEEEeCCCCchHHHHHHHHHHCCceEEEEEEeecCCceeeEEEEEeCCCCCCChHHHHHHHHHHHh
Q 014457 302 RLEICTQNRMGLLSDVTRAFRENGLSVSMAEIGTNGEKATGSFYVMDASGHDVNQRTVELLKQEIGG 368 (424)
Q Consensus 302 ~lev~~~DrpGLL~~Itr~l~e~gl~I~~A~i~T~g~~a~d~Fyv~d~~g~~v~~~~~~~lr~~l~~ 368 (424)
.|+|.+.||+|||++|+++|.++++||..+.+.+.|. +|+.-. ..+...+..|.+++..
T Consensus 2 ~~~v~~~dr~g~l~~i~~~l~~~~~ni~~~~~~~~g~-----i~~~~~---~~~~~~~~~L~~~l~~ 60 (190)
T 2jhe_A 2 RLEVFCEDRLGLTRELLDLLVLRGIDLRGIEIDPIGR-----IYLNFA---ELEFESFSSLMAEIRR 60 (190)
T ss_dssp EEEEEECSCTTHHHHHHHHHHHTTCCEEEEEEETTTE-----EEEEEC---CCCHHHHHHHHHHHHH
T ss_pred EEEEEEecCCcHHHHHHHHHHHcCCCeEEEEEecCCE-----EEEEEE---eCCHHHHHHHHHHHHc
Confidence 5899999999999999999999999999999976632 566443 2223455555555554
No 31
>3l76_A Aspartokinase; allostery, ACT domains, kinase transferase; HET: LYS; 2.54A {Synechocystis}
Probab=96.68 E-value=0.13 Score=54.57 Aligned_cols=216 Identities=14% Similarity=0.195 Sum_probs=126.8
Q ss_pred CCcEEEEEEeC---CcchHHHHHHHHHHHcCceEeeEEEEcCCceEEEEEEEecCCCCCCCCcHHHHHHHHHHHHHHHcc
Q 014457 79 TENTALEVTGV---DRPGLMSEISAVLYELGCHVPAAVAWTHKTRAACIFYIEDGLEGRPITAPEMLAHVEEQLEIVVGA 155 (424)
Q Consensus 79 ~~~t~iev~~~---DRpGLLs~I~~vL~~~~~~I~~A~i~T~~~r~~dvf~V~d~~~g~~i~d~~~~~~i~~~L~~~L~~ 155 (424)
.+...|.|+|. .+||..++++.+|++.|+||..-. |. +. --.|.|... ..++..+.|++.+.-
T Consensus 353 ~~~a~VsvVG~gm~~~~Gv~a~if~aL~~~~Ini~~is--tS-e~-~Is~vI~~~----------d~~~Av~aLh~~f~~ 418 (600)
T 3l76_A 353 KGIAKIAIAGAGMIGRPGIAAKMFKTLADVGVNIEMIS--TS-EV-KVSCVIDQR----------DADRAIAALSNAFGV 418 (600)
T ss_dssp CSEEEEEEECGGGTTCTTHHHHHHHHHHHTTCCCCEEE--EC-SS-EEEEEEEGG----------GHHHHHHHHHHHTTC
T ss_pred CCeEEEEEECCCcccCccHHHHHHHHHHhCCCcEEEEe--cC-CC-EEEEEEcHH----------HHHHHHHHHHHhhcc
Confidence 45788999987 689999999999999999997665 33 22 333445431 112333455554432
Q ss_pred CCCCCccceeeccCCCCCCcchhhhhhhhhhcccccccccCCCCCCCCCCCCCccEEEEeecCCCCeEEEEEE-ecCChh
Q 014457 156 HHGEGETRSVRLTTPMPGRTHTERRLHQLMYADRDYELCRGCDGGAGHWNGCTRTHVLIDSCKEKGYSVVNIK-CIDRPK 234 (424)
Q Consensus 156 ~~~~~~~~~~~~~~~~~g~~h~errl~q~m~~~~~~~~~~~~~~~~~~~~~~~~p~V~v~~~~~~~~tvV~V~-~~DRpg 234 (424)
.. . + ..++-. +| |. ..-.-|..+ ++...|+|. .+|+||
T Consensus 419 ~~-t----------~-----~~~~~~--~~------~~-------------~~v~Gia~~----~~~a~i~i~~~~~~~g 457 (600)
T 3l76_A 419 TL-S----------P-----PKNQTD--TS------HL-------------PAVRGVALD----QDQAQIAIRHVPDRPG 457 (600)
T ss_dssp CB-C----------C-----CCCCCC-----------C-------------CSCCEEEEE----CSEEEEEEEEEESSTT
T ss_pred cC-C----------C-----cccccc--cc------cc-------------CceEEEEee----CCEEEEEEecCCCCcc
Confidence 21 0 0 000000 00 00 011234443 356777774 599999
Q ss_pred HHHHHHHHHHhCCceEEEEEEEee----CC--eEEEEEEEeecCCCCCCCHHHHHHHHHHHHHHHhhcC--------CCc
Q 014457 235 LLFDTLCALTDLQYVVFHAAISSK----GC--FADQEYFIRQTDGCTLDTESQRQKLTQCLIAAIERRV--------SHG 300 (424)
Q Consensus 235 LL~~i~~~L~~~gl~I~~A~I~T~----~~--~a~d~F~V~~~~g~~~~~~~~~~~l~~~L~~al~rr~--------~~~ 300 (424)
+.+++...|++.|+||.--.-+.. .| ..--.|.|.. +..++..+.|++. .... +..
T Consensus 458 ~~~~if~~La~~~I~vDmI~q~~~~~~~~g~~~~~isftv~~---------~d~~~a~~~l~~~-~~~~~~~~v~~~~~~ 527 (600)
T 3l76_A 458 MAAQLFTALAEANISVDMIIQSQRCRINQGTPCRDIAFMVAE---------GDSSQAEAILQPL-IKDWLDAAIVVNKAI 527 (600)
T ss_dssp HHHHHHHHHHHTTCCCCEEEEEEECCCSSSSCEEEEEEEEEH---------HHHHHHHHHHHHH-TTTSTTCEEEEECCE
T ss_pred HHHHHHHHHHHcCCcEEEEEecccccccCCCccceEEEEEeH---------HHHHHHHHHHHHH-HHhcCCceEEEeCCe
Confidence 999999999999999954433321 13 2334466632 3444455555542 2221 134
Q ss_pred eEEEEEe---CCCCchHHHHHHHHHHCCceEEEEEEeecCCceeeEEEEEeCCCCCCChHHHHHHHHHHH
Q 014457 301 LRLEICT---QNRMGLLSDVTRAFRENGLSVSMAEIGTNGEKATGSFYVMDASGHDVNQRTVELLKQEIG 367 (424)
Q Consensus 301 ~~lev~~---~DrpGLL~~Itr~l~e~gl~I~~A~i~T~g~~a~d~Fyv~d~~g~~v~~~~~~~lr~~l~ 367 (424)
.++.|.+ ..+||+.+++-++|.++||||.. |+| .....-++.+.. . .++.+..|.++|.
T Consensus 528 akVSiVG~GM~~~~Gvaa~~f~aL~~~~Ini~m--ist---SEi~Is~vV~~~--~-~~~Av~alh~~F~ 589 (600)
T 3l76_A 528 AKVSIVGSGMIGHPGVAAHFFAALAQENINIEM--IAT---SEIKISCVVPQD--R-GVDALKAAHSAFN 589 (600)
T ss_dssp EEEEEECGGGTTCTTHHHHHHHHHHTTTCCCCE--EEE---CSSEEEEEEEGG--G-HHHHHHHHHHHTT
T ss_pred EEEEEECcccccCccHHHHHHHHHHHCCCceEE--EEc---CCceEEEEEeHH--H-HHHHHHHHHHHhC
Confidence 6788876 59999999999999999999998 543 333444444431 0 1235555555543
No 32
>2pc6_A Probable acetolactate synthase isozyme III (small; regulatory subunit, structural genomi protein structure initiative; HET: MSE; 2.50A {Nitrosomonas europaea atcc 19718} SCOP: d.58.18.6 d.58.18.6
Probab=96.67 E-value=0.0031 Score=55.93 Aligned_cols=63 Identities=14% Similarity=0.247 Sum_probs=49.4
Q ss_pred eEEEEEeCCCCchHHHHHHHHHHCCceEEEEEEeecCC--ceeeEEEEEeCCCCCCChHHHHHHHHHHHhh
Q 014457 301 LRLEICTQNRMGLLSDVTRAFRENGLSVSMAEIGTNGE--KATGSFYVMDASGHDVNQRTVELLKQEIGGS 369 (424)
Q Consensus 301 ~~lev~~~DrpGLL~~Itr~l~e~gl~I~~A~i~T~g~--~a~d~Fyv~d~~g~~v~~~~~~~lr~~l~~~ 369 (424)
..|.|...||||+|++|+++|+++|+||.+..+.+..+ ...=+|.|. . . +..+++|.+++.+.
T Consensus 5 ~~IsV~veNrpGvL~rI~~lfs~rg~NI~Sl~v~~t~d~g~sritivV~-~--d---~~~leql~kQL~Kl 69 (165)
T 2pc6_A 5 HIISLLMENEAGALSRVAGLFSARGYNIESLSVAPTEDPTLSRMTLVTN-G--P---DEIVEQITKQLNKL 69 (165)
T ss_dssp EEEEEEEECSTTHHHHHHHHHHHHTCCCCEEEEEECSSTTEEEEEEEEE-E--C---HHHHHHHHHHHHHS
T ss_pred EEEEEEEeCCCcHHHHHHHHHHHCCCcEEEEEEEecCCCCEEEEEEEEe-c--c---HHHHHHHHHHhcCC
Confidence 57899999999999999999999999999988875443 244455553 1 1 56889999998874
No 33
>2pc6_A Probable acetolactate synthase isozyme III (small; regulatory subunit, structural genomi protein structure initiative; HET: MSE; 2.50A {Nitrosomonas europaea atcc 19718} SCOP: d.58.18.6 d.58.18.6
Probab=96.63 E-value=0.0066 Score=53.79 Aligned_cols=63 Identities=11% Similarity=0.219 Sum_probs=49.4
Q ss_pred EEEEEEeCCcchHHHHHHHHHHHcCceEeeEEEEc-C-CceEEEEEEEecCCCCCCCCcHHHHHHHHHHHHHH
Q 014457 82 TALEVTGVDRPGLMSEISAVLYELGCHVPAAVAWT-H-KTRAACIFYIEDGLEGRPITAPEMLAHVEEQLEIV 152 (424)
Q Consensus 82 t~iev~~~DRpGLLs~I~~vL~~~~~~I~~A~i~T-~-~~r~~dvf~V~d~~~g~~i~d~~~~~~i~~~L~~~ 152 (424)
..|.|...|+||+|++|+++|++.|+||.+..+.+ . .+...-+|.|.. ++..+++|.++|.++
T Consensus 5 ~~IsV~veNrpGvL~rI~~lfs~rg~NI~Sl~v~~t~d~g~sritivV~~--------d~~~leql~kQL~Kl 69 (165)
T 2pc6_A 5 HIISLLMENEAGALSRVAGLFSARGYNIESLSVAPTEDPTLSRMTLVTNG--------PDEIVEQITKQLNKL 69 (165)
T ss_dssp EEEEEEEECSTTHHHHHHHHHHHHTCCCCEEEEEECSSTTEEEEEEEEEE--------CHHHHHHHHHHHHHS
T ss_pred EEEEEEEeCCCcHHHHHHHHHHHCCCcEEEEEEEecCCCCEEEEEEEEec--------cHHHHHHHHHHhcCC
Confidence 57899999999999999999999999999988864 4 355556666653 145677788877654
No 34
>3l76_A Aspartokinase; allostery, ACT domains, kinase transferase; HET: LYS; 2.54A {Synechocystis}
Probab=96.59 E-value=0.14 Score=54.29 Aligned_cols=184 Identities=14% Similarity=0.193 Sum_probs=113.7
Q ss_pred CcEEEEEEe-CCcchHHHHHHHHHHHcCceEeeEEEEc-CCceEEEEEEEecCCCCCCCCcHHHHHHHHHHHHHHHccCC
Q 014457 80 ENTALEVTG-VDRPGLMSEISAVLYELGCHVPAAVAWT-HKTRAACIFYIEDGLEGRPITAPEMLAHVEEQLEIVVGAHH 157 (424)
Q Consensus 80 ~~t~iev~~-~DRpGLLs~I~~vL~~~~~~I~~A~i~T-~~~r~~dvf~V~d~~~g~~i~d~~~~~~i~~~L~~~L~~~~ 157 (424)
+.+.|+|.+ +|.||.+++|...|+++|++|.--.-.. .++...-.|.|... +. ++.++.|.+ +..+.
T Consensus 269 ~~~~i~i~~~~~~~g~~~~if~~La~~~I~Vd~I~qs~~~~~~~~Isftv~~~-------~~---~~a~~~l~~-~~~el 337 (600)
T 3l76_A 269 DQAKVALLRVPDRPGVASKLFRDIAQQQVDIDLIIQSIHDGNSNDIAFTVVKD-------LL---NTAEAVTSA-IAPAL 337 (600)
T ss_dssp CCEEEEEEEEECSTTHHHHHHHHHHHTTCCCCCEEBCCCBTTEEEEEEEECGG-------GH---HHHHHHHHH-HGGGG
T ss_pred CEEEEEEeCCCCcccHHHHHHHHHHHcCCCEEEEEeeccCCCCceEEEEEeHH-------HH---HHHHHHHHH-HHHHh
Confidence 345555553 6899999999999999999995443222 35566666777551 11 222233322 22111
Q ss_pred CCCccceeeccCCCCCCcchhhhhhhhhhcccccccccCCCCCCCCCCCCCccEEEEeecCCCCeEEEEEEec---CChh
Q 014457 158 GEGETRSVRLTTPMPGRTHTERRLHQLMYADRDYELCRGCDGGAGHWNGCTRTHVLIDSCKEKGYSVVNIKCI---DRPK 234 (424)
Q Consensus 158 ~~~~~~~~~~~~~~~g~~h~errl~q~m~~~~~~~~~~~~~~~~~~~~~~~~p~V~v~~~~~~~~tvV~V~~~---DRpg 234 (424)
.. +..| + ....|.++ .+...|.|.+. .+||
T Consensus 338 ~~-------------~~~~-----~-------------------------~~~~v~~~----~~~a~VsvVG~gm~~~~G 370 (600)
T 3l76_A 338 RS-------------YPEA-----D-------------------------QEAEIIVE----KGIAKIAIAGAGMIGRPG 370 (600)
T ss_dssp SS-------------STTC-----S-------------------------SSSEEEEE----CSEEEEEEECGGGTTCTT
T ss_pred hc-------------cccc-----c-------------------------CcceeEec----CCeEEEEEECCCcccCcc
Confidence 00 0000 0 01223332 36789999885 7999
Q ss_pred HHHHHHHHHHhCCceEEEEEEEeeCCeEEEEEEEeecCCCCCCCHHHHHHHHHHHHHHHhhc-CC---------------
Q 014457 235 LLFDTLCALTDLQYVVFHAAISSKGCFADQEYFIRQTDGCTLDTESQRQKLTQCLIAAIERR-VS--------------- 298 (424)
Q Consensus 235 LL~~i~~~L~~~gl~I~~A~I~T~~~~a~d~F~V~~~~g~~~~~~~~~~~l~~~L~~al~rr-~~--------------- 298 (424)
+.+++..+|++.++||.... +. +. --.|.|.. ...++..+.|.+.+... .|
T Consensus 371 v~a~if~aL~~~~Ini~~is--tS-e~-~Is~vI~~---------~d~~~Av~aLh~~f~~~~t~~~~~~~~~~~~~v~G 437 (600)
T 3l76_A 371 IAAKMFKTLADVGVNIEMIS--TS-EV-KVSCVIDQ---------RDADRAIAALSNAFGVTLSPPKNQTDTSHLPAVRG 437 (600)
T ss_dssp HHHHHHHHHHHTTCCCCEEE--EC-SS-EEEEEEEG---------GGHHHHHHHHHHHTTCCBCCCCCCCC---CCSCCE
T ss_pred HHHHHHHHHHhCCCcEEEEe--cC-CC-EEEEEEcH---------HHHHHHHHHHHHhhcccCCCccccccccccCceEE
Confidence 99999999999999998765 32 22 12344522 34455666777766321 11
Q ss_pred -----CceEEEE-EeCCCCchHHHHHHHHHHCCceEEEEEEe
Q 014457 299 -----HGLRLEI-CTQNRMGLLSDVTRAFRENGLSVSMAEIG 334 (424)
Q Consensus 299 -----~~~~lev-~~~DrpGLL~~Itr~l~e~gl~I~~A~i~ 334 (424)
+-..|.| ..+|+||+.++|-..|+++||+|....-+
T Consensus 438 ia~~~~~a~i~i~~~~~~~g~~~~if~~La~~~I~vDmI~q~ 479 (600)
T 3l76_A 438 VALDQDQAQIAIRHVPDRPGMAAQLFTALAEANISVDMIIQS 479 (600)
T ss_dssp EEEECSEEEEEEEEEESSTTHHHHHHHHHHHTTCCCCEEEEE
T ss_pred EEeeCCEEEEEEecCCCCccHHHHHHHHHHHcCCcEEEEEec
Confidence 1234555 45899999999999999999999775443
No 35
>2jhe_A Transcription regulator TYRR; aromatic hydrocarbons catabolism, TYRR protei nucleotide-binding, transcription regulation, activator; HET: PG4; 2.30A {Escherichia coli}
Probab=96.44 E-value=0.012 Score=51.52 Aligned_cols=59 Identities=22% Similarity=0.189 Sum_probs=45.0
Q ss_pred EEEEEeCCcchHHHHHHHHHHHcCceEeeEEEEcCCceEEEEEEEecCCCCCCCCcHHHHHHHHHHHHH
Q 014457 83 ALEVTGVDRPGLMSEISAVLYELGCHVPAAVAWTHKTRAACIFYIEDGLEGRPITAPEMLAHVEEQLEI 151 (424)
Q Consensus 83 ~iev~~~DRpGLLs~I~~vL~~~~~~I~~A~i~T~~~r~~dvf~V~d~~~g~~i~d~~~~~~i~~~L~~ 151 (424)
.|+|.|.||+|||++|+.+|+++++||....+.+.| . +++.-+ ..+.+.+..+...+..
T Consensus 2 ~~~v~~~dr~g~l~~i~~~l~~~~~ni~~~~~~~~g-~----i~~~~~-----~~~~~~~~~L~~~l~~ 60 (190)
T 2jhe_A 2 RLEVFCEDRLGLTRELLDLLVLRGIDLRGIEIDPIG-R----IYLNFA-----ELEFESFSSLMAEIRR 60 (190)
T ss_dssp EEEEEECSCTTHHHHHHHHHHHTTCCEEEEEEETTT-E----EEEEEC-----CCCHHHHHHHHHHHHH
T ss_pred EEEEEEecCCcHHHHHHHHHHHcCCCeEEEEEecCC-E----EEEEEE-----eCCHHHHHHHHHHHHc
Confidence 589999999999999999999999999999998773 2 445442 1234556666666533
No 36
>2dt9_A Aspartokinase; protein-ligand complex, regulatory subunit, transferase; 2.15A {Thermus thermophilus} PDB: 2zho_A
Probab=96.38 E-value=0.061 Score=47.20 Aligned_cols=110 Identities=16% Similarity=0.250 Sum_probs=71.9
Q ss_pred CCCcEEEEEEe-CCcchHHHHHHHHHHHcCceEeeEEEEcC---CceEEEEEEEecCCCCCCCCcHHHHHHHHHHHHHHH
Q 014457 78 STENTALEVTG-VDRPGLMSEISAVLYELGCHVPAAVAWTH---KTRAACIFYIEDGLEGRPITAPEMLAHVEEQLEIVV 153 (424)
Q Consensus 78 ~~~~t~iev~~-~DRpGLLs~I~~vL~~~~~~I~~A~i~T~---~~r~~dvf~V~d~~~g~~i~d~~~~~~i~~~L~~~L 153 (424)
..+.+.|+|.+ +|+||.+++|+.+|++.|+||..-..... .|...-.|.|... +.++ ..+.|.+..
T Consensus 13 ~~~~a~Itv~g~~~~~G~~a~if~~La~~~InVd~I~q~~~~~~~g~~~isf~V~~~-------d~~~---a~~~L~~~~ 82 (167)
T 2dt9_A 13 DLDHAQIGLIGIPDQPGIAAKVFQALAERGIAVDMIIQGVPGHDPSRQQMAFTVKKD-------FAQE---ALEALEPVL 82 (167)
T ss_dssp ECSEEEEEEEEEECSTTHHHHHHHHHHHHTCCCSCEEBCCCCSCTTEEEEEEEEEGG-------GHHH---HHHHHHHHH
T ss_pred eCCEEEEEEecCCCCCCHHHHHHHHHHHcCCcEEEEEcCCCCCCCCceEEEEEEehH-------HHHH---HHHHHHHHH
Confidence 44578888887 89999999999999999999987543321 2345556766541 2222 122222211
Q ss_pred ccCCCCCccceeeccCCCCCCcchhhhhhhhhhcccccccccCCCCCCCCCCCCCccEEEEeecCCCCeEEEEEEecC--
Q 014457 154 GAHHGEGETRSVRLTTPMPGRTHTERRLHQLMYADRDYELCRGCDGGAGHWNGCTRTHVLIDSCKEKGYSVVNIKCID-- 231 (424)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~g~~h~errl~q~m~~~~~~~~~~~~~~~~~~~~~~~~p~V~v~~~~~~~~tvV~V~~~D-- 231 (424)
. + + . . .|.+ +.+...|.|.+.+
T Consensus 83 ~-~------------------------~-----------------------~---~-~v~~----~~~~a~vsvVG~gm~ 106 (167)
T 2dt9_A 83 A-E------------------------I-----------------------G---G-EAIL----RPDIAKVSIVGVGLA 106 (167)
T ss_dssp H-H------------------------H-----------------------C---C-EEEE----ECSEEEEEEEESSGG
T ss_pred H-H------------------------h-----------------------C---C-cEEE----eCCEEEEEEECCCcc
Confidence 0 0 0 0 0 1222 1256788888865
Q ss_pred -ChhHHHHHHHHHHhCCceEEEE
Q 014457 232 -RPKLLFDTLCALTDLQYVVFHA 253 (424)
Q Consensus 232 -RpgLL~~i~~~L~~~gl~I~~A 253 (424)
+||+++++..+|++.|+||...
T Consensus 107 ~~~Gv~a~~f~aL~~~~InI~~i 129 (167)
T 2dt9_A 107 STPEVPAKMFQAVASTGANIEMI 129 (167)
T ss_dssp GSTHHHHHHHHHHHHTTCCCCEE
T ss_pred cCcCHHHHHHHHHHHCCCCEEEE
Confidence 9999999999999999999543
No 37
>2fgc_A Acetolactate synthase, small subunit; regulatory subunit, structural genomi protein structure initiative; 2.30A {Thermotoga maritima} SCOP: d.58.18.6 d.58.18.6
Probab=96.37 E-value=0.01 Score=53.75 Aligned_cols=64 Identities=16% Similarity=0.289 Sum_probs=48.8
Q ss_pred ceEEEEEeCCCCchHHHHHHHHHHCCceEEEEEEeecCCc--eeeEEEEEeCCCCCCChHHHHHHHHHHHhh
Q 014457 300 GLRLEICTQNRMGLLSDVTRAFRENGLSVSMAEIGTNGEK--ATGSFYVMDASGHDVNQRTVELLKQEIGGS 369 (424)
Q Consensus 300 ~~~lev~~~DrpGLL~~Itr~l~e~gl~I~~A~i~T~g~~--a~d~Fyv~d~~g~~v~~~~~~~lr~~l~~~ 369 (424)
...|.|...|+||.|++|+.+|+++|+||.+..+....+. ..=++.|... +..+++|.+++.+.
T Consensus 29 ~~~LsVlVeN~pGvLaRItglfsrRG~NI~SLtV~~ted~gisRitIvV~g~------e~~ieqL~kQL~KL 94 (193)
T 2fgc_A 29 EHLVSMLVHNKPGVMRKVANLFARRGFNISSITVGESETPGLSRLVIMVKGD------DKTIEQIEKQAYKL 94 (193)
T ss_dssp EEEEEEEEECCTTHHHHHHHHHHTTTCEEEEEEEEECSSTTEEEEEEEEEEC------TTHHHHHHHHHTTS
T ss_pred EEEEEEEECCCChHHHHHHHHHHHCCceEEEEEeeccCCCCEEEEEEEEECC------HHHHHHHHHHhcCc
Confidence 3579999999999999999999999999999888633332 2234444322 45789999998873
No 38
>3s1t_A Aspartokinase; ACT domain, threonine binding, regulatory domain of aspartok transferase; 1.63A {Mycobacterium tuberculosis}
Probab=95.99 E-value=0.078 Score=47.39 Aligned_cols=103 Identities=14% Similarity=0.111 Sum_probs=69.6
Q ss_pred CeEEEEEE-ecCChhHHHHHHHHHHhCCceEEEEEEEe-e--CCeEEEEEEEeecCCCCCCCHHHHHHHHHHHHH---HH
Q 014457 221 GYSVVNIK-CIDRPKLLFDTLCALTDLQYVVFHAAISS-K--GCFADQEYFIRQTDGCTLDTESQRQKLTQCLIA---AI 293 (424)
Q Consensus 221 ~~tvV~V~-~~DRpgLL~~i~~~L~~~gl~I~~A~I~T-~--~~~a~d~F~V~~~~g~~~~~~~~~~~l~~~L~~---al 293 (424)
+.+.|+|. .+|+||.+++|...|++.|+||..-.-.. . .|..--.|+|...+ .++..+.|++ .+
T Consensus 15 ~~~~Iti~~~~~~~G~~a~If~~La~~~I~vd~I~q~~s~~~~g~~~isftv~~~~---------~~~a~~~L~~~~~el 85 (181)
T 3s1t_A 15 SEAKVTIVGLPDIPGYAAKVFRAVADADVNIDMVLQNVSKVEDGKTDITFTCSRDV---------GPAAVEKLDSLRNEI 85 (181)
T ss_dssp SEEEEEEEEEESSTTHHHHHHHHHHHTTCCCCCEEECCCCTTTCEEEEEEEEETTT---------HHHHHHHHHHTHHHH
T ss_pred CEEEEEEecCCCCcCHHHHHHHHHHHcCCcEEEEEecCCcccCCccEEEEEEehhH---------HHHHHHHHHHHHHhc
Confidence 45666663 68999999999999999999997654332 2 45555567774321 1222233332 22
Q ss_pred h-hc--C-CCceEEEEEeC---CCCchHHHHHHHHHHCCceEEEEE
Q 014457 294 E-RR--V-SHGLRLEICTQ---NRMGLLSDVTRAFRENGLSVSMAE 332 (424)
Q Consensus 294 ~-rr--~-~~~~~lev~~~---DrpGLL~~Itr~l~e~gl~I~~A~ 332 (424)
. .. . +....+.|.+. ++||+.+++.++|.++|++|....
T Consensus 86 ~~~~v~~~~~va~VsvVG~gm~~~~Gvaa~~f~aLa~~~InI~~Is 131 (181)
T 3s1t_A 86 GFSQLLYDDHIGKVSLIGAGMRSHPGVTATFCEALAAVGVNIELIS 131 (181)
T ss_dssp CCSEEEEESCEEEEEEEEECCTTCHHHHHHHHHHHHHTTCCCCEEE
T ss_pred CcceEEEeCCEEEEEEEecccccCchHHHHHHHHHHHCCCcEEEEE
Confidence 1 01 1 23457777665 899999999999999999999844
No 39
>1y7p_A Hypothetical protein AF1403; structural genomics, protein structure initiative, PSI, alpha-beta-alpha sandwich; HET: RIP; 1.90A {Archaeoglobus fulgidus} SCOP: c.23.1.7 d.58.18.12
Probab=95.65 E-value=0.018 Score=53.06 Aligned_cols=37 Identities=27% Similarity=0.388 Sum_probs=30.3
Q ss_pred eEEEEEeCCCCchHHHHHHHHHHCCceEEEEEEeecC
Q 014457 301 LRLEICTQNRMGLLSDVTRAFRENGLSVSMAEIGTNG 337 (424)
Q Consensus 301 ~~lev~~~DrpGLL~~Itr~l~e~gl~I~~A~i~T~g 337 (424)
..|.|.+.||||+|++|+++|+++++||......+..
T Consensus 5 VtL~I~a~DRpGLLsDIt~vLAe~kiNIltIn~~~~~ 41 (223)
T 1y7p_A 5 RGLRIIAENKIGVLRDLTTIIAEEGGNITFAQTFLIK 41 (223)
T ss_dssp EEEEEEEECCTTHHHHHHHHCC----CEEEEEEEECC
T ss_pred EEEEEEEcCCCCHHHHHHHHHHHcCCCceEEEEEccc
Confidence 5789999999999999999999999999999998753
No 40
>2fgc_A Acetolactate synthase, small subunit; regulatory subunit, structural genomi protein structure initiative; 2.30A {Thermotoga maritima} SCOP: d.58.18.6 d.58.18.6
Probab=95.51 E-value=0.035 Score=50.23 Aligned_cols=64 Identities=9% Similarity=0.260 Sum_probs=47.8
Q ss_pred cEEEEEEeCCcchHHHHHHHHHHHcCceEeeEEEE-cCC-ceEEEEEEEecCCCCCCCCcHHHHHHHHHHHHHH
Q 014457 81 NTALEVTGVDRPGLMSEISAVLYELGCHVPAAVAW-THK-TRAACIFYIEDGLEGRPITAPEMLAHVEEQLEIV 152 (424)
Q Consensus 81 ~t~iev~~~DRpGLLs~I~~vL~~~~~~I~~A~i~-T~~-~r~~dvf~V~d~~~g~~i~d~~~~~~i~~~L~~~ 152 (424)
...|.|...|+||.|++|+++|+..|+||.+-.+. |.+ +...-++.|... +..+++|.++|.++
T Consensus 29 ~~~LsVlVeN~pGvLaRItglfsrRG~NI~SLtV~~ted~gisRitIvV~g~--------e~~ieqL~kQL~KL 94 (193)
T 2fgc_A 29 EHLVSMLVHNKPGVMRKVANLFARRGFNISSITVGESETPGLSRLVIMVKGD--------DKTIEQIEKQAYKL 94 (193)
T ss_dssp EEEEEEEEECCTTHHHHHHHHHHTTTCEEEEEEEEECSSTTEEEEEEEEEEC--------TTHHHHHHHHHTTS
T ss_pred EEEEEEEECCCChHHHHHHHHHHHCCceEEEEEeeccCCCCEEEEEEEEECC--------HHHHHHHHHHhcCc
Confidence 46799999999999999999999999999987775 554 555555666541 23456777776543
No 41
>4go7_X Aspartokinase; transferase; 2.00A {Mycobacterium tuberculosis} PDB: 4go5_X
Probab=95.50 E-value=0.053 Score=49.41 Aligned_cols=134 Identities=14% Similarity=0.150 Sum_probs=82.4
Q ss_pred CCeEEEEEE-ecCChhHHHHHHHHHHhCCceEEEEEEEe---eCCeEEEEEEEeecCCCCCCCHHHHHHHHHHHHHHHhh
Q 014457 220 KGYSVVNIK-CIDRPKLLFDTLCALTDLQYVVFHAAISS---KGCFADQEYFIRQTDGCTLDTESQRQKLTQCLIAAIER 295 (424)
Q Consensus 220 ~~~tvV~V~-~~DRpgLL~~i~~~L~~~gl~I~~A~I~T---~~~~a~d~F~V~~~~g~~~~~~~~~~~l~~~L~~al~r 295 (424)
++.+.|+|. .+|+||+.++|..+|++.|+||..-.-.. .++.....|.+...+. .+...+...+...+..
T Consensus 33 ~~~a~Iti~g~~~~pG~aa~IF~~La~~~InVDmI~Qs~s~~~~~~~~~sftv~~~d~------~~~~~~l~~~~~~~~~ 106 (200)
T 4go7_X 33 RSEAKVTIVGLPDIPGYAAKVFRAVADADVNIDMVLQNVSKVEDGKTDITFTCSRDVG------PAAVEKLDSLRNEIGF 106 (200)
T ss_dssp CSEEEEEEEEEECSTTHHHHHHHHHHHTTCCCCCEECCCCC--CCEEEEEEEEEGGGH------HHHHHHHHTTHHHHCC
T ss_pred CCEEEEEEecCCCCccHHHHHHHHHHHhCcceEEEeeccccccccceEEEEecchhhH------HHHHHHHHHHHhhhce
Confidence 457788886 59999999999999999999998754332 2345555676633211 1222222222222211
Q ss_pred -c---CCCceEEEEE---eCCCCchHHHHHHHHHHCCceEEEEEEeecCCceeeEEEEEeCCCCCCChHHHHHHHHHHH
Q 014457 296 -R---VSHGLRLEIC---TQNRMGLLSDVTRAFRENGLSVSMAEIGTNGEKATGSFYVMDASGHDVNQRTVELLKQEIG 367 (424)
Q Consensus 296 -r---~~~~~~lev~---~~DrpGLL~~Itr~l~e~gl~I~~A~i~T~g~~a~d~Fyv~d~~g~~v~~~~~~~lr~~l~ 367 (424)
. -+...++.|. ...+||+.+++-++|.+.|+||.. |+| ...+.=++.+.. . ..+.+++|.++|.
T Consensus 107 ~~v~~~~~iakVSvVG~GM~~~~GVaak~F~aLa~~~INI~m--Ist---SEi~IS~vV~~~--d-~~~Av~aLH~~F~ 177 (200)
T 4go7_X 107 SQLLYDDHIGKVSLIGAGMRSHPGVTATFCEALAAVGVNIEL--IST---SEIRISVLCRDT--E-LDKAVVALHEAFG 177 (200)
T ss_dssp SEEEEECCEEEEEEEEESCTTCHHHHHHHHHHHHHTTCCCCE--EEE---CSSEEEEEEEGG--G-HHHHHHHHHHHHT
T ss_pred eeEEEecCeeeeeeeccccccCCCcHHHHHHHHHHCCCCEEE--EEc---cCCEEEEEEeHH--H-HHHHHHHHHHHhC
Confidence 1 1123455554 458899999999999999999999 454 334444444432 1 1236677777765
No 42
>1y7p_A Hypothetical protein AF1403; structural genomics, protein structure initiative, PSI, alpha-beta-alpha sandwich; HET: RIP; 1.90A {Archaeoglobus fulgidus} SCOP: c.23.1.7 d.58.18.12
Probab=95.39 E-value=0.018 Score=52.95 Aligned_cols=49 Identities=18% Similarity=0.346 Sum_probs=36.7
Q ss_pred cEEEEEEeCCcchHHHHHHHHHHHcCceEeeEEEEcC-----CceEEEEEEEec
Q 014457 81 NTALEVTGVDRPGLMSEISAVLYELGCHVPAAVAWTH-----KTRAACIFYIED 129 (424)
Q Consensus 81 ~t~iev~~~DRpGLLs~I~~vL~~~~~~I~~A~i~T~-----~~r~~dvf~V~d 129 (424)
...|.+.+.||||+|++|+.+|+++++||......+. ++.+.-.+.+.+
T Consensus 4 ~VtL~I~a~DRpGLLsDIt~vLAe~kiNIltIn~~~~~kG~~ng~A~I~IEV~d 57 (223)
T 1y7p_A 4 LRGLRIIAENKIGVLRDLTTIIAEEGGNITFAQTFLIKHGEHEGKALIYFEIEG 57 (223)
T ss_dssp CEEEEEEEECCTTHHHHHHHHCC----CEEEEEEEECCSSTTTTEEEEEEEECS
T ss_pred eEEEEEEEcCCCCHHHHHHHHHHHcCCCceEEEEEccccCCcCCEEEEEEEECC
Confidence 4689999999999999999999999999999999984 445555554443
No 43
>2qmx_A Prephenate dehydratase; APC86053, L-Phe inhibition, PDT, CHL tepidum TLS, structural genomics, PSI-2, protein structure initiative; HET: PHE; 2.30A {Chlorobium tepidum tls}
Probab=95.37 E-value=0.04 Score=52.94 Aligned_cols=73 Identities=18% Similarity=0.204 Sum_probs=51.6
Q ss_pred ceEEEEEeCCCCchHHHHHHHHHHCCceEEEEEEeecCC-ceeeEEEEEeCCCCCCChHHHHHHHHHHHhhhhhhc
Q 014457 300 GLRLEICTQNRMGLLSDVTRAFRENGLSVSMAEIGTNGE-KATGSFYVMDASGHDVNQRTVELLKQEIGGSVLVVN 374 (424)
Q Consensus 300 ~~~lev~~~DrpGLL~~Itr~l~e~gl~I~~A~i~T~g~-~a~d~Fyv~d~~g~~v~~~~~~~lr~~l~~~~~~~~ 374 (424)
.+.|-+..+|+||-|+++...|+.+|||+++.+-.-... ...-.||| |..|.+-++.. +..-++|......+|
T Consensus 200 ktsl~f~~~~~pGaL~~~L~~Fa~~gINLtkIESRP~~~~~~~Y~Ffv-D~eg~~~d~~v-~~aL~~L~~~~~~~k 273 (283)
T 2qmx_A 200 KTSIVFALPNEQGSLFRALATFALRGIDLTKIESRPSRKKAFEYLFYA-DFIGHREDQNV-HNALENLREFATMVK 273 (283)
T ss_dssp EEEEEEEEECCTTHHHHHHHHHHTTTCCEEEEEEEECSSSTTEEEEEE-EEESCTTSHHH-HHHHHHHHTTCSEEE
T ss_pred eEEEEEEcCCCCchHHHHHHHHHHcCCCeeEEEeeEcCCCCcceEEEE-EEecCCCcHHH-HHHHHHHHHhcCeEE
Confidence 456666778999999999999999999999988775544 47789999 66787654333 333344544333344
No 44
>3s1t_A Aspartokinase; ACT domain, threonine binding, regulatory domain of aspartok transferase; 1.63A {Mycobacterium tuberculosis}
Probab=95.32 E-value=1.4 Score=39.02 Aligned_cols=111 Identities=11% Similarity=0.152 Sum_probs=72.0
Q ss_pred CCcEEEEEE-eCCcchHHHHHHHHHHHcCceEeeEEEEcC---CceEEEEEEEecCCCCCCCCcHHHHHHHHHHHHHHHc
Q 014457 79 TENTALEVT-GVDRPGLMSEISAVLYELGCHVPAAVAWTH---KTRAACIFYIEDGLEGRPITAPEMLAHVEEQLEIVVG 154 (424)
Q Consensus 79 ~~~t~iev~-~~DRpGLLs~I~~vL~~~~~~I~~A~i~T~---~~r~~dvf~V~d~~~g~~i~d~~~~~~i~~~L~~~L~ 154 (424)
.+.+.|+|. -+|+||.+++|..+|++.|+||.--..... .+...-.|.|... +.++ ..+.|.+ +.
T Consensus 14 ~~~~~Iti~~~~~~~G~~a~If~~La~~~I~vd~I~q~~s~~~~g~~~isftv~~~-------~~~~---a~~~L~~-~~ 82 (181)
T 3s1t_A 14 RSEAKVTIVGLPDIPGYAAKVFRAVADADVNIDMVLQNVSKVEDGKTDITFTCSRD-------VGPA---AVEKLDS-LR 82 (181)
T ss_dssp CSEEEEEEEEEESSTTHHHHHHHHHHHTTCCCCCEEECCCCTTTCEEEEEEEEETT-------THHH---HHHHHHH-TH
T ss_pred CCEEEEEEecCCCCcCHHHHHHHHHHHcCCcEEEEEecCCcccCCccEEEEEEehh-------HHHH---HHHHHHH-HH
Confidence 345666654 579999999999999999999976543322 5666667777652 1222 2222222 11
Q ss_pred cCCCCCccceeeccCCCCCCcchhhhhhhhhhcccccccccCCCCCCCCCCCCCccEEEEeecCCCCeEEEEEEec---C
Q 014457 155 AHHGEGETRSVRLTTPMPGRTHTERRLHQLMYADRDYELCRGCDGGAGHWNGCTRTHVLIDSCKEKGYSVVNIKCI---D 231 (424)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~g~~h~errl~q~m~~~~~~~~~~~~~~~~~~~~~~~~p~V~v~~~~~~~~tvV~V~~~---D 231 (424)
.+ +. + -.|.++ .+...|.|.+. +
T Consensus 83 ~e------------------------l~--------~------------------~~v~~~----~~va~VsvVG~gm~~ 108 (181)
T 3s1t_A 83 NE------------------------IG--------F------------------SQLLYD----DHIGKVSLIGAGMRS 108 (181)
T ss_dssp HH------------------------HC--------C------------------SEEEEE----SCEEEEEEEEECCTT
T ss_pred Hh------------------------cC--------c------------------ceEEEe----CCEEEEEEEeccccc
Confidence 00 00 0 112221 24678888775 8
Q ss_pred ChhHHHHHHHHHHhCCceEEEEE
Q 014457 232 RPKLLFDTLCALTDLQYVVFHAA 254 (424)
Q Consensus 232 RpgLL~~i~~~L~~~gl~I~~A~ 254 (424)
.||+.+++..+|++.|+||....
T Consensus 109 ~~Gvaa~~f~aLa~~~InI~~Is 131 (181)
T 3s1t_A 109 HPGVTATFCEALAAVGVNIELIS 131 (181)
T ss_dssp CHHHHHHHHHHHHHTTCCCCEEE
T ss_pred CchHHHHHHHHHHHCCCcEEEEE
Confidence 99999999999999999998866
No 45
>3ab4_A Aspartokinase; aspartate kinase, concerted inhibition, alternative initiati amino-acid biosynthesis, ATP-binding; HET: LYS; 2.47A {Corynebacterium glutamicum} PDB: 3aaw_A* 3ab2_A
Probab=95.04 E-value=0.18 Score=51.04 Aligned_cols=102 Identities=12% Similarity=0.139 Sum_probs=70.8
Q ss_pred CCeEEEEEE-ecCChhHHHHHHHHHHhCCceEEEEEEEee---CCeEEEEEEEeecCCCCCCCHHHHHHHHHHHHHHHhh
Q 014457 220 KGYSVVNIK-CIDRPKLLFDTLCALTDLQYVVFHAAISSK---GCFADQEYFIRQTDGCTLDTESQRQKLTQCLIAAIER 295 (424)
Q Consensus 220 ~~~tvV~V~-~~DRpgLL~~i~~~L~~~gl~I~~A~I~T~---~~~a~d~F~V~~~~g~~~~~~~~~~~l~~~L~~al~r 295 (424)
++.+.|+|. .+|+||.++++...|++.|+||..-...|. .|...-.|+|... + .++..+.|++. ..
T Consensus 262 ~~~~~i~v~~~~~~~g~~~~If~~La~~~I~vd~I~q~~s~~~~g~~~isf~v~~~------~---~~~a~~~l~~~-~~ 331 (421)
T 3ab4_A 262 KSEAKVTVLGISDKPGEAAKVFRALADAEINIDMVLQNVFSVEDGTTDITFTCPRS------D---GRRAMEILKKL-QV 331 (421)
T ss_dssp CSEEEEEEEEEESSTTHHHHHHHHHHHTTCCCEEEEECCCC--CCEEEEEEEEETT------T---HHHHHHHHHHH-HT
T ss_pred CCEEEEEEeccCCcccHHHHHHHHHHHcCCcEEEEEccCccccCCcceEEEEEech------h---HHHHHHHHHHH-HH
Confidence 356788888 699999999999999999999998765442 3434455777331 1 12223334432 11
Q ss_pred cC--------CCceEEEEEeC---CCCchHHHHHHHHHHCCceEEEE
Q 014457 296 RV--------SHGLRLEICTQ---NRMGLLSDVTRAFRENGLSVSMA 331 (424)
Q Consensus 296 r~--------~~~~~lev~~~---DrpGLL~~Itr~l~e~gl~I~~A 331 (424)
.. .+...+.|.+. ++||+++++.++|.++|+||...
T Consensus 332 ~~~~~~v~~~~~~a~vsvVG~gm~~~~Gv~a~~f~aL~~~~InI~~i 378 (421)
T 3ab4_A 332 QGNWTNVLYDDQVGKVSLVGAGMKSHPGVTAEFMEALRDVNVNIELI 378 (421)
T ss_dssp TTTCSEEEEECCEEEEEEECGGGTSCTTHHHHHHHHHHHTTCCCCEE
T ss_pred HcCCceEEEeCCeEEEEEEccCcccCccHHHHHHHHHHHCCCCEEEE
Confidence 11 12345777765 89999999999999999999964
No 46
>3mwb_A Prephenate dehydratase; L-Phe, PSI, MCSG, structural genomics, midwest center for ST genomics, protein structure initiative, lyase; HET: MSE PHE; 2.00A {Arthrobacter aurescens}
Probab=94.94 E-value=0.061 Score=52.37 Aligned_cols=111 Identities=16% Similarity=0.208 Sum_probs=69.9
Q ss_pred hCC-ceEEEEEEEeeCCeEEEEEEEeecCCCCCCCHHHHHHHHHHHHHHHhhcCCCceEEEEEeC-CCCchHHHHHHHHH
Q 014457 245 DLQ-YVVFHAAISSKGCFADQEYFIRQTDGCTLDTESQRQKLTQCLIAAIERRVSHGLRLEICTQ-NRMGLLSDVTRAFR 322 (424)
Q Consensus 245 ~~g-l~I~~A~I~T~~~~a~d~F~V~~~~g~~~~~~~~~~~l~~~L~~al~rr~~~~~~lev~~~-DrpGLL~~Itr~l~ 322 (424)
..| ++|..-.|....+ ..-.|+|.......... .....|.|-+..+ |+||-|+++...|+
T Consensus 163 ~Yg~L~il~~~I~D~~~-N~TRFlvl~~~~~~~~~-----------------~~~~kTSl~f~~~~~~pGaL~~~L~~Fa 224 (313)
T 3mwb_A 163 EQPGLNVLAEDIGDNPD-AVTRFILVSRPGALPER-----------------TGADKTTVVVPLPEDHPGALMEILDQFA 224 (313)
T ss_dssp HCTTCEEEESCCCSCTT-CEEEEEEEECSCCCCCC-----------------CSSEEEEEEEECSSCCTTHHHHHHHHHH
T ss_pred HcCChhhhhhcccCCCc-ceeEEEEEecCCCCCCC-----------------CCCCeEEEEEEeCCCCCCHHHHHHHHHH
Confidence 356 8888877765322 22347776544321100 0112467777775 99999999999999
Q ss_pred HCCceEEEEEEeecC-CceeeEEEEEeCCCCCCChHHHHHHHHHHHhhhhhhcc
Q 014457 323 ENGLSVSMAEIGTNG-EKATGSFYVMDASGHDVNQRTVELLKQEIGGSVLVVNK 375 (424)
Q Consensus 323 e~gl~I~~A~i~T~g-~~a~d~Fyv~d~~g~~v~~~~~~~lr~~l~~~~~~~~~ 375 (424)
.+|||+++.+-.-.. ....-.||| |..|..-++...++| ++|......+|-
T Consensus 225 ~~gINLtkIESRP~~~~~~~Y~Ffi-D~eg~~~d~~v~~aL-~~L~~~~~~~ki 276 (313)
T 3mwb_A 225 SRGVNLSRIESRPTGQYLGHYFFSI-DADGHATDSRVADAL-AGLHRISPATRF 276 (313)
T ss_dssp TTTCCEEEEEEEECSSSTTSEEEEE-EEESCTTSHHHHHHH-HHHHHHCTTCEE
T ss_pred HCCccEEEEEEeecCCCCccEEEEE-EEeCCCCcHHHHHHH-HHHHHhcCcEEE
Confidence 999999998877544 446778999 666776443333333 455553344554
No 47
>2qmw_A PDT, prephenate dehydratase; APC85812, prephenate dehydratase (PDT), staphylococcus aureu aureus MU50, structural genomics, PSI-2; 2.30A {Staphylococcus aureus subsp} SCOP: c.94.1.1 d.58.18.3
Probab=94.67 E-value=0.089 Score=50.07 Aligned_cols=98 Identities=12% Similarity=0.174 Sum_probs=63.6
Q ss_pred CCceEEEEEEEeeCCeEEEEEEEeecCCCCCCCHHHHHHHHHHHHHHHhhcCCCceEEEEEe---CCCCchHHHHHHHHH
Q 014457 246 LQYVVFHAAISSKGCFADQEYFIRQTDGCTLDTESQRQKLTQCLIAAIERRVSHGLRLEICT---QNRMGLLSDVTRAFR 322 (424)
Q Consensus 246 ~gl~I~~A~I~T~~~~a~d~F~V~~~~g~~~~~~~~~~~l~~~L~~al~rr~~~~~~lev~~---~DrpGLL~~Itr~l~ 322 (424)
.|++|..-.|....+ ..-.|+|..... +. . ...+.|-+.. .|+||-|+++...|+
T Consensus 154 ygL~il~~~I~D~~~-N~TRF~vl~~~~-~~-------------------~-~~ktsl~f~~~~~~~~pGaL~~~L~~Fa 211 (267)
T 2qmw_A 154 YGFTPIDTHIEDYPH-NVTRFLVIKNQQ-QF-------------------D-QNATSLMFLITPMHDKPGLLASVLNTFA 211 (267)
T ss_dssp GTCCEEEECCCSCSC-CEEEEEEEESCC-CC-------------------C-SSCSEEEEEEEESSCCTTHHHHHHHHHH
T ss_pred CCCcEeeccccCCCC-CceEEEEEecCC-CC-------------------C-CCeEEEEEEcCCCCCCcChHHHHHHHHH
Confidence 377887777765322 223477755433 11 0 1245677777 899999999999999
Q ss_pred HCCceEEEEEEeecC-CceeeEEEEEeCCCCCCChHHHHHHHHHHHh
Q 014457 323 ENGLSVSMAEIGTNG-EKATGSFYVMDASGHDVNQRTVELLKQEIGG 368 (424)
Q Consensus 323 e~gl~I~~A~i~T~g-~~a~d~Fyv~d~~g~~v~~~~~~~lr~~l~~ 368 (424)
.+|||+++.+-.-.. ....-.||| |.. .+ +++.++..-++|..
T Consensus 212 ~~gINLtkIESRP~~~~~~~Y~Ffi-D~e-~~-~d~~v~~aL~~L~~ 255 (267)
T 2qmw_A 212 LFNINLSWIESRPLKTQLGMYRFFV-QAD-SA-ITTDIKKVIAILET 255 (267)
T ss_dssp TTTCCEEEEEEEECSSSTTCEEEEE-EES-CC-SCHHHHHHHHHHHH
T ss_pred HcCCCeeEEEEeecCCCCccEEEEE-EEe-cC-CcHHHHHHHHHHHH
Confidence 999999998877554 447789999 444 34 33433333344444
No 48
>4go7_X Aspartokinase; transferase; 2.00A {Mycobacterium tuberculosis} PDB: 4go5_X
Probab=94.37 E-value=0.48 Score=43.02 Aligned_cols=52 Identities=10% Similarity=0.235 Sum_probs=37.5
Q ss_pred CCCcEEEEEEe-CCcchHHHHHHHHHHHcCceEeeEEEEc---CCceEEEEEEEec
Q 014457 78 STENTALEVTG-VDRPGLMSEISAVLYELGCHVPAAVAWT---HKTRAACIFYIED 129 (424)
Q Consensus 78 ~~~~t~iev~~-~DRpGLLs~I~~vL~~~~~~I~~A~i~T---~~~r~~dvf~V~d 129 (424)
+.+.+.|+|.+ +|+||.+++|+.+|++.|+||----... .++.....|.+..
T Consensus 32 ~~~~a~Iti~g~~~~pG~aa~IF~~La~~~InVDmI~Qs~s~~~~~~~~~sftv~~ 87 (200)
T 4go7_X 32 DRSEAKVTIVGLPDIPGYAAKVFRAVADADVNIDMVLQNVSKVEDGKTDITFTCSR 87 (200)
T ss_dssp ECSEEEEEEEEEECSTTHHHHHHHHHHHTTCCCCCEECCCCC--CCEEEEEEEEEG
T ss_pred cCCEEEEEEecCCCCccHHHHHHHHHHHhCcceEEEeeccccccccceEEEEecch
Confidence 44567788764 8999999999999999999997643322 2345555666654
No 49
>3luy_A Probable chorismate mutase; structural genomics, APC38059, 3-phenylp PSI-2, protein structure initiative; HET: PPY; 2.00A {Bifidobacterium adolescentis}
Probab=94.31 E-value=0.15 Score=50.06 Aligned_cols=72 Identities=19% Similarity=0.155 Sum_probs=49.5
Q ss_pred eEEEEEeC--CCCchHHHHHHHHHHCCceEEEEEEeecCC-ceeeEEEEEeCCCCCCChHHHHHHHHHHHhhhhhhc
Q 014457 301 LRLEICTQ--NRMGLLSDVTRAFRENGLSVSMAEIGTNGE-KATGSFYVMDASGHDVNQRTVELLKQEIGGSVLVVN 374 (424)
Q Consensus 301 ~~lev~~~--DrpGLL~~Itr~l~e~gl~I~~A~i~T~g~-~a~d~Fyv~d~~g~~v~~~~~~~lr~~l~~~~~~~~ 374 (424)
+.+-+... |+||-|+++-..|+.+|||+++.+-.-... ...-.||| |-.|..-++...++| ++|......+|
T Consensus 207 ts~i~~~~~~~~pGaL~~~L~~Fa~~gINLtkIESRP~~~~~~~Y~Ffi-D~eg~~~d~~v~~AL-~~L~~~~~~~k 281 (329)
T 3luy_A 207 ESVLTLIPLVTGPGVLANLLDVFRDAGLNMTSFISRPIKGRTGTYSFIV-TLDAAPWEERFRDAL-VEIAEHGDWAK 281 (329)
T ss_dssp EEEEEEECSCCSTTHHHHHHHHHHHTTCCEEEEEEEEETTEEEEEEEEE-EESSCTTSHHHHHHH-HHHHHTTCEEE
T ss_pred eEEEEEecCCCCCCHHHHHHHHHHHCCcceEEEEeeECCCCCccEEEEE-EEeCCcCCHHHHHHH-HHHHHhCCeEE
Confidence 44444454 799999999999999999999988775444 46778998 667877554443444 34554333344
No 50
>3ab4_A Aspartokinase; aspartate kinase, concerted inhibition, alternative initiati amino-acid biosynthesis, ATP-binding; HET: LYS; 2.47A {Corynebacterium glutamicum} PDB: 3aaw_A* 3ab2_A
Probab=94.06 E-value=2.6 Score=42.37 Aligned_cols=136 Identities=15% Similarity=0.147 Sum_probs=83.6
Q ss_pred CcEEEEEE-eCCcchHHHHHHHHHHHcCceEeeEEEEcC---CceEEEEEEEecCCCCCCCCcHHHHHHHHHHHHHHHcc
Q 014457 80 ENTALEVT-GVDRPGLMSEISAVLYELGCHVPAAVAWTH---KTRAACIFYIEDGLEGRPITAPEMLAHVEEQLEIVVGA 155 (424)
Q Consensus 80 ~~t~iev~-~~DRpGLLs~I~~vL~~~~~~I~~A~i~T~---~~r~~dvf~V~d~~~g~~i~d~~~~~~i~~~L~~~L~~ 155 (424)
+.+.|+|. -+|+||.+++|...|+++|+||.--...|. .+...-.|.|... +.++. .+.|.+ +..
T Consensus 263 ~~~~i~v~~~~~~~g~~~~If~~La~~~I~vd~I~q~~s~~~~g~~~isf~v~~~-------~~~~a---~~~l~~-~~~ 331 (421)
T 3ab4_A 263 SEAKVTVLGISDKPGEAAKVFRALADAEINIDMVLQNVFSVEDGTTDITFTCPRS-------DGRRA---MEILKK-LQV 331 (421)
T ss_dssp SEEEEEEEEEESSTTHHHHHHHHHHHTTCCCEEEEECCCC--CCEEEEEEEEETT-------THHHH---HHHHHH-HHT
T ss_pred CEEEEEEeccCCcccHHHHHHHHHHHcCCcEEEEEccCccccCCcceEEEEEech-------hHHHH---HHHHHH-HHH
Confidence 45567777 589999999999999999999987655453 3445556666541 22222 222322 111
Q ss_pred CCCCCccceeeccCCCCCCcchhhhhhhhhhcccccccccCCCCCCCCCCCCCccEEEEeecCCCCeEEEEEEec---CC
Q 014457 156 HHGEGETRSVRLTTPMPGRTHTERRLHQLMYADRDYELCRGCDGGAGHWNGCTRTHVLIDSCKEKGYSVVNIKCI---DR 232 (424)
Q Consensus 156 ~~~~~~~~~~~~~~~~~g~~h~errl~q~m~~~~~~~~~~~~~~~~~~~~~~~~p~V~v~~~~~~~~tvV~V~~~---DR 232 (424)
+... ..|.++ .+...|.|.+. +.
T Consensus 332 ~~~~--------------------------------------------------~~v~~~----~~~a~vsvVG~gm~~~ 357 (421)
T 3ab4_A 332 QGNW--------------------------------------------------TNVLYD----DQVGKVSLVGAGMKSH 357 (421)
T ss_dssp TTTC--------------------------------------------------SEEEEE----CCEEEEEEECGGGTSC
T ss_pred HcCC--------------------------------------------------ceEEEe----CCeEEEEEEccCcccC
Confidence 1100 112221 25678888874 89
Q ss_pred hhHHHHHHHHHHhCCceEEEEEEEeeCCeEEEEEEEeecCCCCCCCHHHHHHHHHHHHHHH
Q 014457 233 PKLLFDTLCALTDLQYVVFHAAISSKGCFADQEYFIRQTDGCTLDTESQRQKLTQCLIAAI 293 (424)
Q Consensus 233 pgLL~~i~~~L~~~gl~I~~A~I~T~~~~a~d~F~V~~~~g~~~~~~~~~~~l~~~L~~al 293 (424)
||.++++..+|++.|+||..- .+..-.+ .|.|.. +..++..+.|.+++
T Consensus 358 ~Gv~a~~f~aL~~~~InI~~i--s~Se~~i--s~vV~~---------~d~~~Av~~Lh~~f 405 (421)
T 3ab4_A 358 PGVTAEFMEALRDVNVNIELI--STSEIRI--SVLIRE---------DDLDAAARALHEQF 405 (421)
T ss_dssp TTHHHHHHHHHHHTTCCCCEE--EEETTEE--EEEEEG---------GGHHHHHHHHHHHT
T ss_pred ccHHHHHHHHHHHCCCCEEEE--EcCCCeE--EEEEeH---------HHHHHHHHHHHHHH
Confidence 999999999999999999833 3333222 244422 24455556666654
No 51
>3c1m_A Probable aspartokinase; allosteric inhibition, threonine-sensitive, ACT DOMA amino-acid biosynthesis, threonine biosynthesis; HET: ANP; 2.30A {Methanocaldococcus jannaschii} PDB: 3c1n_A 3c20_A 2hmf_A*
Probab=93.84 E-value=0.45 Score=48.85 Aligned_cols=131 Identities=15% Similarity=0.193 Sum_probs=85.9
Q ss_pred CCeEEEEEEe---cCChhHHHHHHHHHHhCCceEEEEEEEeeCCeEEEEEEEeecCCCCCCCHHHHHHHHHHHHHHH---
Q 014457 220 KGYSVVNIKC---IDRPKLLFDTLCALTDLQYVVFHAAISSKGCFADQEYFIRQTDGCTLDTESQRQKLTQCLIAAI--- 293 (424)
Q Consensus 220 ~~~tvV~V~~---~DRpgLL~~i~~~L~~~gl~I~~A~I~T~~~~a~d~F~V~~~~g~~~~~~~~~~~l~~~L~~al--- 293 (424)
++.+.|+|.+ .++||+++++..+|++.|++|..-...+.. ..-.|+|... ..++..+.|.+.+
T Consensus 316 ~~~a~Isv~g~~m~~~~G~~a~if~~La~~~InV~~IsQ~tse--~~Is~~V~~~---------d~~~a~~~L~~~l~~~ 384 (473)
T 3c1m_A 316 KNVALINIFGAGMVGVSGTAARIFKALGEEEVNVILISQGSSE--TNISLVVSEE---------DVDKALKALKREFGDF 384 (473)
T ss_dssp EEEEEEEEEECSSSCHHHHHHHHHHHHHHTTCCEEEEEECCTT--CCEEEEEEGG---------GHHHHHHHHHHHHCC-
T ss_pred CCeEEEEEecCCCCCCcCHHHHHHHHHHHcCCcEEEEEecCCC--CEEEEEEech---------HHHHHHHHHHHHHhhh
Confidence 3578899986 688999999999999999999876653321 2234666432 2344555566555
Q ss_pred -----hhc--C------CCceEEEEEeC---CCCchHHHHHHHHHHCCceEEEEEEeecCCceeeEEEEEeCCCCCCChH
Q 014457 294 -----ERR--V------SHGLRLEICTQ---NRMGLLSDVTRAFRENGLSVSMAEIGTNGEKATGSFYVMDASGHDVNQR 357 (424)
Q Consensus 294 -----~rr--~------~~~~~lev~~~---DrpGLL~~Itr~l~e~gl~I~~A~i~T~g~~a~d~Fyv~d~~g~~v~~~ 357 (424)
... . ++-..+.|.+. ++||+++++.++|.++|+||.. | ++|....+.-+|.+... .++
T Consensus 385 ~~~~~~~~~~~~~v~~~~~~a~vsvVG~gm~~~~Gvaak~f~aL~~~~InI~m--i-sqgtSe~~Is~vV~~~d---~~~ 458 (473)
T 3c1m_A 385 GKKSFLNNNLIRDVSVDKDVCVISVVGAGMRGAKGIAGKIFTAVSESGANIKM--I-AQGSSEVNISFVIDEKD---LLN 458 (473)
T ss_dssp ---CTTSCCCEEEEEEEEEEEEEEEECTTTTTCTTHHHHHHHHHHHHTCCCCE--E-EESSCSSEEEEEEEGGG---HHH
T ss_pred cccccccccccceEEEeCCcEEEEEEecCCCCChhHHHHHHHHHHHCCCCEEE--E-ecCCCCceEEEEEcHHH---HHH
Confidence 321 1 01245677765 5899999999999999999955 3 45555666555545421 123
Q ss_pred HHHHHHHHHH
Q 014457 358 TVELLKQEIG 367 (424)
Q Consensus 358 ~~~~lr~~l~ 367 (424)
.++.|.++|.
T Consensus 459 Av~aLh~~f~ 468 (473)
T 3c1m_A 459 CVRKLHEKFI 468 (473)
T ss_dssp HHHHHHHHHT
T ss_pred HHHHHHHHHh
Confidence 5666666654
No 52
>1sc6_A PGDH, D-3-phosphoglycerate dehydrogenase; allosteric regulation phosphoglycerate dehydrogenase PGDH, oxidoreductase; HET: NAD; 2.09A {Escherichia coli} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 PDB: 1psd_A* 1yba_A* 2p9c_A* 2p9e_A* 2pa3_A* 2p9g_A*
Probab=92.77 E-value=0.18 Score=50.72 Aligned_cols=47 Identities=23% Similarity=0.393 Sum_probs=42.3
Q ss_pred ceEEEEEeCCCCchHHHHHHHHHHCCceEEEEEEeecCCceeeEEEE
Q 014457 300 GLRLEICTQNRMGLLSDVTRAFRENGLSVSMAEIGTNGEKATGSFYV 346 (424)
Q Consensus 300 ~~~lev~~~DrpGLL~~Itr~l~e~gl~I~~A~i~T~g~~a~d~Fyv 346 (424)
..+|-+.-.|+||.+..|+.+|.++|+||..-...+.|+.+.-++-+
T Consensus 331 ~~rl~~~h~d~PGvi~~i~~iL~~~~iNIa~m~~~r~g~~A~~vidv 377 (404)
T 1sc6_A 331 GRRLMHIHENRPGVLTALNKIFAEQGVNIAAQYLQTSAQMGYVVIDI 377 (404)
T ss_dssp SEEEEEEEESCTTHHHHHHHHHHHTTCEEEEEEEEECSSEEEEEEEE
T ss_pred cceEEEEeCCCCCHHHHHHHHHHHcCCCHHHhhccCCCCEEEEEEEc
Confidence 46788899999999999999999999999999999988887777766
No 53
>1ygy_A PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, serine biosy structural genomics, PSI, protein structure initiative; HET: TAR; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 d.81.2.2 PDB: 3dc2_A* 3ddn_A*
Probab=91.30 E-value=0.83 Score=47.50 Aligned_cols=63 Identities=21% Similarity=0.336 Sum_probs=50.0
Q ss_pred CCceEEEEEeCCCCchHHHHHHHHHHCCceEEEEEEeec--CCceeeEEEEEeCCCCCCChHHHHHHHH
Q 014457 298 SHGLRLEICTQNRMGLLSDVTRAFRENGLSVSMAEIGTN--GEKATGSFYVMDASGHDVNQRTVELLKQ 364 (424)
Q Consensus 298 ~~~~~lev~~~DrpGLL~~Itr~l~e~gl~I~~A~i~T~--g~~a~d~Fyv~d~~g~~v~~~~~~~lr~ 364 (424)
++++.|-+.-.|+||.+..|+..|.++|+||....+.-. |+.+.-.+.+ ..+++++.+++|++
T Consensus 452 ~~~~~l~v~~~D~PG~I~~v~~~Lg~~~INIa~m~v~r~~~~~~a~~~i~v----d~~~~~~~l~~l~~ 516 (529)
T 1ygy_A 452 AQGINLIIHYVDRPGALGKIGTLLGTAGVNIQAAQLSEDAEGPGATILLRL----DQDVPDDVRTAIAA 516 (529)
T ss_dssp SCSEEEEEEESCCTTHHHHHHHHHHHTTCCEEEEEEEECSSSSCEEEEEEE----SSCCCHHHHHHHHH
T ss_pred CCccEEEEEcCCCCchHHHHHHHHHhcCCCeeeEEEecCCCCCEEEEEEEE----CCCCCHHHHHHHhc
Confidence 347788899999999999999999999999999999754 4555555555 23666778888864
No 54
>3c1m_A Probable aspartokinase; allosteric inhibition, threonine-sensitive, ACT DOMA amino-acid biosynthesis, threonine biosynthesis; HET: ANP; 2.30A {Methanocaldococcus jannaschii} PDB: 3c1n_A 3c20_A 2hmf_A*
Probab=90.36 E-value=6.1 Score=40.30 Aligned_cols=115 Identities=13% Similarity=0.101 Sum_probs=71.2
Q ss_pred CCcEEEEEEe---CCcchHHHHHHHHHHHcCceEeeEEEEcCCceEEEEEEEecCCCCCCCCcHHHHHHHHHHHHHHHcc
Q 014457 79 TENTALEVTG---VDRPGLMSEISAVLYELGCHVPAAVAWTHKTRAACIFYIEDGLEGRPITAPEMLAHVEEQLEIVVGA 155 (424)
Q Consensus 79 ~~~t~iev~~---~DRpGLLs~I~~vL~~~~~~I~~A~i~T~~~r~~dvf~V~d~~~g~~i~d~~~~~~i~~~L~~~L~~ 155 (424)
.+.+.|.|.+ .++||.+++|..+|+++|+||..-...|.. ..-.|.|... + .++..+.|.+.+.+
T Consensus 316 ~~~a~Isv~g~~m~~~~G~~a~if~~La~~~InV~~IsQ~tse--~~Is~~V~~~-------d---~~~a~~~L~~~l~~ 383 (473)
T 3c1m_A 316 KNVALINIFGAGMVGVSGTAARIFKALGEEEVNVILISQGSSE--TNISLVVSEE-------D---VDKALKALKREFGD 383 (473)
T ss_dssp EEEEEEEEEECSSSCHHHHHHHHHHHHHHTTCCEEEEEECCTT--CCEEEEEEGG-------G---HHHHHHHHHHHHCC
T ss_pred CCeEEEEEecCCCCCCcCHHHHHHHHHHHcCCcEEEEEecCCC--CEEEEEEech-------H---HHHHHHHHHHHHhh
Confidence 3567788887 678999999999999999999776654432 2344666541 1 12333344333311
Q ss_pred CCCCCccceeeccCCCCCCcchhhhhhhhhhcccccccccCCCCCCCCCCCCCccEEEEeecCCCCeEEEEEEec---CC
Q 014457 156 HHGEGETRSVRLTTPMPGRTHTERRLHQLMYADRDYELCRGCDGGAGHWNGCTRTHVLIDSCKEKGYSVVNIKCI---DR 232 (424)
Q Consensus 156 ~~~~~~~~~~~~~~~~~g~~h~errl~q~m~~~~~~~~~~~~~~~~~~~~~~~~p~V~v~~~~~~~~tvV~V~~~---DR 232 (424)
-. . . ... ..+ .-..|.++ .+...|.|.+. ++
T Consensus 384 ~~-~--~-~~~------------~~~--------------------------~~~~v~~~----~~~a~vsvVG~gm~~~ 417 (473)
T 3c1m_A 384 FG-K--K-SFL------------NNN--------------------------LIRDVSVD----KDVCVISVVGAGMRGA 417 (473)
T ss_dssp --------CTT------------SCC--------------------------CEEEEEEE----EEEEEEEEECTTTTTC
T ss_pred hc-c--c-ccc------------ccc--------------------------ccceEEEe----CCcEEEEEEecCCCCC
Confidence 00 0 0 000 000 00223332 24678888874 69
Q ss_pred hhHHHHHHHHHHhCCceEE
Q 014457 233 PKLLFDTLCALTDLQYVVF 251 (424)
Q Consensus 233 pgLL~~i~~~L~~~gl~I~ 251 (424)
||.++++..+|++.|+||.
T Consensus 418 ~Gvaak~f~aL~~~~InI~ 436 (473)
T 3c1m_A 418 KGIAGKIFTAVSESGANIK 436 (473)
T ss_dssp TTHHHHHHHHHHHHTCCCC
T ss_pred hhHHHHHHHHHHHCCCCEE
Confidence 9999999999999999994
No 55
>3tvi_A Aspartokinase; structural genomics, ACT domains, regulatory domains, kinase transferase, PSI-2, protein structure initiative; HET: LYS; 3.00A {Clostridium acetobutylicum}
Probab=89.39 E-value=2.6 Score=42.88 Aligned_cols=132 Identities=12% Similarity=0.168 Sum_probs=82.2
Q ss_pred CeEEEEEEe---cCChhHHHHHHHHHHhCCceEEEEEEEeeCCeEEEEEEEeecCCCCCCCHHHHHHHHHHHHHHHh-hc
Q 014457 221 GYSVVNIKC---IDRPKLLFDTLCALTDLQYVVFHAAISSKGCFADQEYFIRQTDGCTLDTESQRQKLTQCLIAAIE-RR 296 (424)
Q Consensus 221 ~~tvV~V~~---~DRpgLL~~i~~~L~~~gl~I~~A~I~T~~~~a~d~F~V~~~~g~~~~~~~~~~~l~~~L~~al~-rr 296 (424)
+.+.|+|.+ ++.||.++++...|++.+++|.... + +. .--.|+|...+-.. ..+++.+.|...+. ..
T Consensus 297 ~~~~i~i~~~~~~~~~g~~~~if~~l~~~~i~vd~i~--~-~~-~~is~~V~~~d~~~-----~~~~~~~el~~~~~~~~ 367 (446)
T 3tvi_A 297 NFTVIAIEKALLNSEVGFCRKILSILEMYGVSFEHMP--S-GV-DSVSLVIEDCKLDG-----KCDKIIEEIKKQCNPDS 367 (446)
T ss_dssp EEEEEEEECTTGGGSTTHHHHHHHHHHTTTCCEEEBC--E-ET-TEEEEEEEHHHHTT-----THHHHHHHHHHHSCCSE
T ss_pred CEEEEEEEecCCCccHHHHHHHHHHHHHcCCcEEEEe--c-CC-CEEEEEEecchHHH-----HHHHHHHHHHHhcCCCc
Confidence 567888886 6999999999999999999998643 2 11 12346664322110 22334444443331 01
Q ss_pred C---CCceEEEEEeC---CCCchHHHHHHHHHHCCceEEEEEEeecCCceeeEEEEEeCCCCCCChHHHHHHHHHHH
Q 014457 297 V---SHGLRLEICTQ---NRMGLLSDVTRAFRENGLSVSMAEIGTNGEKATGSFYVMDASGHDVNQRTVELLKQEIG 367 (424)
Q Consensus 297 ~---~~~~~lev~~~---DrpGLL~~Itr~l~e~gl~I~~A~i~T~g~~a~d~Fyv~d~~g~~v~~~~~~~lr~~l~ 367 (424)
+ .....+.|.+. .+||+.+++.++|.++|+||.. | ++|....+.-+|.+.. - .++.+..|.++|.
T Consensus 368 v~v~~~vA~VSvVG~gM~~~~Gvaarif~aLa~~~InI~m--I-sqgtSei~Is~vV~~~--d-~~~Av~aLH~~ff 438 (446)
T 3tvi_A 368 IEIHPNMALVATVGTGMAKTKGIANKIFTALSKENVNIRM--I-DQGSSEINVIVGVETV--D-FEKAVKSIYNAFN 438 (446)
T ss_dssp EEEEEEEEEEEEECGGGSSCTTHHHHHHHHHHHTTCCEEE--E-EECSCTTEEEEEEEGG--G-HHHHHHHHHHHHC
T ss_pred EEEeCCeEEEEEECCCccCChhHHHHHHHHHHHCCCCEEE--E-EecCCCceEEEEEcHH--H-HHHHHHHHHHHHh
Confidence 1 12357777765 5899999999999999999988 3 3455555544444432 0 1235566655554
No 56
>1sc6_A PGDH, D-3-phosphoglycerate dehydrogenase; allosteric regulation phosphoglycerate dehydrogenase PGDH, oxidoreductase; HET: NAD; 2.09A {Escherichia coli} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 PDB: 1psd_A* 1yba_A* 2p9c_A* 2p9e_A* 2pa3_A* 2p9g_A*
Probab=88.93 E-value=1.2 Score=44.81 Aligned_cols=48 Identities=10% Similarity=-0.033 Sum_probs=42.1
Q ss_pred CeEEEEEEecCChhHHHHHHHHHHhCCceEEEEEEEeeCCeEEEEEEE
Q 014457 221 GYSVVNIKCIDRPKLLFDTLCALTDLQYVVFHAAISSKGCFADQEYFI 268 (424)
Q Consensus 221 ~~tvV~V~~~DRpgLL~~i~~~L~~~gl~I~~A~I~T~~~~a~d~F~V 268 (424)
++..+.+.-.|+||.+..|+.+|.++|+||....+.+.|+.++-++-|
T Consensus 330 ~~~rl~~~h~d~PGvi~~i~~iL~~~~iNIa~m~~~r~g~~A~~vidv 377 (404)
T 1sc6_A 330 GGRRLMHIHENRPGVLTALNKIFAEQGVNIAAQYLQTSAQMGYVVIDI 377 (404)
T ss_dssp SSEEEEEEEESCTTHHHHHHHHHHHTTCEEEEEEEEECSSEEEEEEEE
T ss_pred CcceEEEEeCCCCCHHHHHHHHHHHcCCCHHHhhccCCCCEEEEEEEc
Confidence 456788999999999999999999999999999999988888655544
No 57
>1phz_A Protein (phenylalanine hydroxylase); aromatic amino acid hydroxylase, phosphorylation, intrasteric regulation, allosteric regulation; 2.20A {Rattus norvegicus} SCOP: d.58.18.3 d.178.1.1 PDB: 2phm_A
Probab=88.05 E-value=0.47 Score=47.85 Aligned_cols=67 Identities=16% Similarity=0.299 Sum_probs=48.6
Q ss_pred ceEEEEEeCCCCchHHHHHHHHHHCCceEEEEEEeecC-CceeeEEEEEeCCCCCCChHHHHHHHHHHHhh
Q 014457 300 GLRLEICTQNRMGLLSDVTRAFRENGLSVSMAEIGTNG-EKATGSFYVMDASGHDVNQRTVELLKQEIGGS 369 (424)
Q Consensus 300 ~~~lev~~~DrpGLL~~Itr~l~e~gl~I~~A~i~T~g-~~a~d~Fyv~d~~g~~v~~~~~~~lr~~l~~~ 369 (424)
.+.|-+..+|+||-|+++...|+.+|||+++.+-.-.. ....-.||| |.. .. +++.++++-++|...
T Consensus 34 KTSLiFsl~n~pGAL~~~L~~Fa~~gINLTkIESRPsk~~~~eY~FfV-D~e-h~-~d~~v~~AL~eL~~~ 101 (429)
T 1phz_A 34 AISLIFSLKEEVGALAKVLRLFEENDINLTHIESRPSRLNKDEYEFFT-YLD-KR-TKPVLGSIIKSLRND 101 (429)
T ss_dssp CEEEEEEEECCTTHHHHHHHHHHTTTCCTTSEEEEECSSCTTEEEEEE-CBC-GG-GHHHHHHHHHHHHHT
T ss_pred eEEEEEEeCCCccHHHHHHHHHHHcCCceEEEEeeecCCCCccEEEEE-EEe-eC-CCHHHHHHHHHHHhh
Confidence 56777778899999999999999999999998776543 446779999 554 32 344344444455543
No 58
>1ygy_A PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, serine biosy structural genomics, PSI, protein structure initiative; HET: TAR; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 d.81.2.2 PDB: 3dc2_A* 3ddn_A*
Probab=87.86 E-value=1.9 Score=44.71 Aligned_cols=65 Identities=18% Similarity=0.340 Sum_probs=50.2
Q ss_pred CCCCcEEEEEEeCCcchHHHHHHHHHHHcCceEeeEEEEc--CCceEEEEEEEecCCCCCCCCcHHHHHHHHH
Q 014457 77 VSTENTALEVTGVDRPGLMSEISAVLYELGCHVPAAVAWT--HKTRAACIFYIEDGLEGRPITAPEMLAHVEE 147 (424)
Q Consensus 77 ~~~~~t~iev~~~DRpGLLs~I~~vL~~~~~~I~~A~i~T--~~~r~~dvf~V~d~~~g~~i~d~~~~~~i~~ 147 (424)
....+..|-+.-.|+||.+.+|+.+|.++|+||.+.++.. .++.+.-++.+.++ + +++.+++|++
T Consensus 450 ~~~~~~~l~v~~~D~PG~I~~v~~~Lg~~~INIa~m~v~r~~~~~~a~~~i~vd~~-----~-~~~~l~~l~~ 516 (529)
T 1ygy_A 450 LRAQGINLIIHYVDRPGALGKIGTLLGTAGVNIQAAQLSEDAEGPGATILLRLDQD-----V-PDDVRTAIAA 516 (529)
T ss_dssp EESCSEEEEEEESCCTTHHHHHHHHHHHTTCCEEEEEEEECSSSSCEEEEEEESSC-----C-CHHHHHHHHH
T ss_pred ecCCccEEEEEcCCCCchHHHHHHHHHhcCCCeeeEEEecCCCCCEEEEEEEECCC-----C-CHHHHHHHhc
Confidence 3455778889999999999999999999999999999987 46677777776542 4 3445555543
No 59
>3mtj_A Homoserine dehydrogenase; rossmann-fold, PSI, MCSG, structural genomics, midwest cente structural genomics; 2.15A {Thiobacillus denitrificans}
Probab=85.79 E-value=1.9 Score=43.80 Aligned_cols=50 Identities=20% Similarity=0.353 Sum_probs=35.0
Q ss_pred ceEEEEEeCCCCchHHHHHHHHHHCCceEEEEEEeec--CCceeeEEEEEeC
Q 014457 300 GLRLEICTQNRMGLLSDVTRAFRENGLSVSMAEIGTN--GEKATGSFYVMDA 349 (424)
Q Consensus 300 ~~~lev~~~DrpGLL~~Itr~l~e~gl~I~~A~i~T~--g~~a~d~Fyv~d~ 349 (424)
.+-+.+...|+||.|++|+.+|.++|++|.+..=.-. ++.......+|+.
T Consensus 359 ~yy~r~~~~d~~gvl~~i~~~~~~~~isi~~~~q~~~~~~~~~~~~v~~th~ 410 (444)
T 3mtj_A 359 AYYLRLRAFDRPGVLADITRILADSSISIDAMVQKEPAEGEEQVDIILLTHV 410 (444)
T ss_dssp EEEEEEEEC-CCHHHHHHHHHHHHTTCCEEEEEECC------CEEEEEEECS
T ss_pred eeEEEEEecCcccHHHHHHHHHHhcCCceeEEeecccccCCCCceEEEEecc
Confidence 4678888999999999999999999999988543211 1112455556554
No 60
>3k5p_A D-3-phosphoglycerate dehydrogenase; niaid, ssgcid, seattle structural genomics center for infect disease, brucellosis; 2.15A {Brucella melitensis biovar abortus}
Probab=85.71 E-value=1.3 Score=44.66 Aligned_cols=49 Identities=12% Similarity=0.190 Sum_probs=43.4
Q ss_pred CeEEEEEEecCChhHHHHHHHHHHhCCceEEEEEEEeeCCeEEEEEEEeecC
Q 014457 221 GYSVVNIKCIDRPKLLFDTLCALTDLQYVVFHAAISSKGCFADQEYFIRQTD 272 (424)
Q Consensus 221 ~~tvV~V~~~DRpgLL~~i~~~L~~~gl~I~~A~I~T~~~~a~d~F~V~~~~ 272 (424)
+...|.+.-+|.||.|.+|..+|+++|+||..-...|.++++ |.+.|.+
T Consensus 342 ~~~r~~~~h~n~p~~~~~i~~~~~~~~~ni~~~~~~~~~~~~---y~~~d~~ 390 (416)
T 3k5p_A 342 TGTRFMHVHENRPGILNSLMNVFSHHHINIASQFLQTDGEVG---YLVMEAD 390 (416)
T ss_dssp SSEEEEEEECCCTTHHHHHHHHHHHTTCCEEEEEEEECSSCE---EEEEEEC
T ss_pred CceEEEEEecCCccHHHHHHHHHHHcCCCHHHHhccCCCceE---EEEEEec
Confidence 567999999999999999999999999999999999999988 4455555
No 61
>3k5p_A D-3-phosphoglycerate dehydrogenase; niaid, ssgcid, seattle structural genomics center for infect disease, brucellosis; 2.15A {Brucella melitensis biovar abortus}
Probab=85.35 E-value=3.1 Score=41.89 Aligned_cols=47 Identities=21% Similarity=0.344 Sum_probs=42.4
Q ss_pred ceEEEEEeCCCCchHHHHHHHHHHCCceEEEEEEeecCCceeeEEEE
Q 014457 300 GLRLEICTQNRMGLLSDVTRAFRENGLSVSMAEIGTNGEKATGSFYV 346 (424)
Q Consensus 300 ~~~lev~~~DrpGLL~~Itr~l~e~gl~I~~A~i~T~g~~a~d~Fyv 346 (424)
..+|-+.-.|+||.|..|+.+|+++|+||..-...|.|+-+.-+.-|
T Consensus 343 ~~r~~~~h~n~p~~~~~i~~~~~~~~~ni~~~~~~~~~~~~y~~~d~ 389 (416)
T 3k5p_A 343 GTRFMHVHENRPGILNSLMNVFSHHHINIASQFLQTDGEVGYLVMEA 389 (416)
T ss_dssp SEEEEEEECCCTTHHHHHHHHHHHTTCCEEEEEEEECSSCEEEEEEE
T ss_pred ceEEEEEecCCccHHHHHHHHHHHcCCCHHHHhccCCCceEEEEEEe
Confidence 47999999999999999999999999999999999999887666555
No 62
>2cdq_A Aspartokinase; aspartate kinase, amino acid metabolism, ACT domain, alloste S-adenosylmethionine, lysine, allosteric effector, plant; HET: TAR SAM LYS; 2.85A {Arabidopsis thaliana} SCOP: c.73.1.3 d.58.18.10 d.58.18.10
Probab=84.48 E-value=3.1 Score=43.03 Aligned_cols=135 Identities=12% Similarity=0.174 Sum_probs=82.2
Q ss_pred CeEEEEEEe---cCChhHHHHHHHHHHhCCceEEEEEEEeeCCeEEEEEEEeecCCCCCC-CHHHHHHHHHHHHHHHhhc
Q 014457 221 GYSVVNIKC---IDRPKLLFDTLCALTDLQYVVFHAAISSKGCFADQEYFIRQTDGCTLD-TESQRQKLTQCLIAAIERR 296 (424)
Q Consensus 221 ~~tvV~V~~---~DRpgLL~~i~~~L~~~gl~I~~A~I~T~~~~a~d~F~V~~~~g~~~~-~~~~~~~l~~~L~~al~rr 296 (424)
+.+.|+|.+ .++||.++++..+|++.|++|..-. |. ..--+|+|...+..... ....++++.+.|.. + ..
T Consensus 340 ~~~~I~i~~~~m~~~~g~~~~if~~la~~~I~vd~I~--ss--e~sis~~v~~~~~~~~~~~~~~l~~~~~el~~-~-~~ 413 (510)
T 2cdq_A 340 NVTMLDIASTRMLGQVGFLAKVFSIFEELGISVDVVA--TS--EVSISLTLDPSKLWSRELIQQELDHVVEELEK-I-AV 413 (510)
T ss_dssp EEEEEEEECGGGTTCTTHHHHHHHHHHHTTCCEEEEE--EE--TTEEEEEECCGGGSSSCCCHHHHHHHHHHHTT-T-SE
T ss_pred CeEEEEEEcCCCCCcccHHHHHHHHHHHcCCcEEEEE--eC--CCeEEEEEechHhhhhhHHHHHHHHHHHHhCC-C-Ce
Confidence 578899986 6899999999999999999999873 21 11234666433211110 11223333333321 0 01
Q ss_pred C---CCceEEEEEeC--CCCchHHHHHHHHHHCCceEEEEEEeecCCceeeEEEEEeCCCCCCChHHHHHHHHHHH
Q 014457 297 V---SHGLRLEICTQ--NRMGLLSDVTRAFRENGLSVSMAEIGTNGEKATGSFYVMDASGHDVNQRTVELLKQEIG 367 (424)
Q Consensus 297 ~---~~~~~lev~~~--DrpGLL~~Itr~l~e~gl~I~~A~i~T~g~~a~d~Fyv~d~~g~~v~~~~~~~lr~~l~ 367 (424)
. .+-..+.|.+. ..||+.+++..+|.++|+||.. | ++|....+.=+|.+... ..+.+..|.++|.
T Consensus 414 v~~~~~~a~VsiVG~m~~~~Gvaa~~f~aL~~~~InI~m--I-sqGsSei~Is~vV~~~d---~~~Av~aLH~~f~ 483 (510)
T 2cdq_A 414 VNLLKGRAIISLIGNVQHSSLILERAFHVLYTKGVNVQM--I-SQGASKVNISFIVNEAE---AEGCVQALHKSFF 483 (510)
T ss_dssp EEEEEEEEEEEEEECGGGHHHHHHHHHHHHHHHTCCCSE--E-EECTTCSEEEEEEEHHH---HHHHHHHHHHHHH
T ss_pred EEEeCCcEEEEEEEECCCChhHHHHHHHHHHHCCCCEEE--E-EecCCcceEEEEEeHHH---HHHHHHHHHHHHh
Confidence 1 12346667666 7789999999999999999988 4 45666666544544310 0124555555554
No 63
>3mah_A Aspartokinase; aspartate kinase, structural genomics, MCSG, transferase, PSI-2; 2.31A {Porphyromonas gingivalis}
Probab=79.18 E-value=2.9 Score=35.89 Aligned_cols=125 Identities=17% Similarity=0.221 Sum_probs=73.1
Q ss_pred CeEEEEEEe---cCChhHHHHHHHHHHhCCceEEEEEEEeeCCeEEEEEEEeecCCCCCCCHHHHHHHHHHHHHHHhhcC
Q 014457 221 GYSVVNIKC---IDRPKLLFDTLCALTDLQYVVFHAAISSKGCFADQEYFIRQTDGCTLDTESQRQKLTQCLIAAIERRV 297 (424)
Q Consensus 221 ~~tvV~V~~---~DRpgLL~~i~~~L~~~gl~I~~A~I~T~~~~a~d~F~V~~~~g~~~~~~~~~~~l~~~L~~al~rr~ 297 (424)
+.+.|+|.+ ++.||..+++..+|++.|++|..-. +... --.|+|...+ ..+++.+.|.+ . ...
T Consensus 17 ~va~Iti~~~~m~~~~g~~~~if~~La~~~I~vd~I~--~s~~--~Isf~v~~~~--------~~~~il~~l~~-~-~~v 82 (157)
T 3mah_A 17 GITVIKVKSSNKLLSWHFMRKLFEIFEFYQEPVDMVA--TSEV--GVSLTIDNDK--------NLPDIVRALSD-I-GDV 82 (157)
T ss_dssp EEEEEEEEECTTSCHHHHHHHHHHHHHHTTCCCSCEE--CCSS--EEEEEESCCT--------THHHHHHHHTT-T-EEE
T ss_pred CEEEEEEEeCCCCCchhHHHHHHHHHHHcCCCEEEEE--ecCC--EEEEEECChH--------HHHHHHHHHhc-c-CeE
Confidence 567888874 5899999999999999999997654 2111 2346664321 22333333322 0 111
Q ss_pred ---CCceEEEEEeC---CCCchHHHHHHHHHHCCceEEEEEEeecCCceeeEEEEEeCCCCCCChHHHHHHHHHHH
Q 014457 298 ---SHGLRLEICTQ---NRMGLLSDVTRAFRENGLSVSMAEIGTNGEKATGSFYVMDASGHDVNQRTVELLKQEIG 367 (424)
Q Consensus 298 ---~~~~~lev~~~---DrpGLL~~Itr~l~e~gl~I~~A~i~T~g~~a~d~Fyv~d~~g~~v~~~~~~~lr~~l~ 367 (424)
..-..+.|.+. ++||+.+++..+|. |++|.. | ++|....+.-++.+.. . .++.++.|.++|.
T Consensus 83 ~~~~~~a~vsvvG~gm~~~~gv~a~~f~aL~--~Ini~~--i-sqg~Se~~is~vv~~~--d-~~~a~~~Lh~~f~ 150 (157)
T 3mah_A 83 TVDKDMVIICIVGDMEWDNVGFEARIINALK--GVPVRM--I-SYGGSNYNVSVLVKAE--D-KKKALIALSNKLF 150 (157)
T ss_dssp EEEEEEEEEEEEC------CCHHHHHHHTTT--TSCCSE--E-EECSSSSCEEEEEEGG--G-HHHHHHHHHHHHH
T ss_pred EEeCCeEEEEEECCCcccCccHHHHHHHHhC--CCCeEE--E-eeCCCCCEEEEEEcHH--H-HHHHHHHHHHHHh
Confidence 12346666654 68999999999999 999887 3 3454444444443432 0 1134555555553
No 64
>3tvi_A Aspartokinase; structural genomics, ACT domains, regulatory domains, kinase transferase, PSI-2, protein structure initiative; HET: LYS; 3.00A {Clostridium acetobutylicum}
Probab=75.38 E-value=16 Score=37.00 Aligned_cols=34 Identities=9% Similarity=0.005 Sum_probs=29.2
Q ss_pred CeEEEEEEec---CChhHHHHHHHHHHhCCceEEEEE
Q 014457 221 GYSVVNIKCI---DRPKLLFDTLCALTDLQYVVFHAA 254 (424)
Q Consensus 221 ~~tvV~V~~~---DRpgLL~~i~~~L~~~gl~I~~A~ 254 (424)
+...|.|.+. ..||+.+++..+|++.|+||.-..
T Consensus 373 ~vA~VSvVG~gM~~~~Gvaarif~aLa~~~InI~mIs 409 (446)
T 3tvi_A 373 NMALVATVGTGMAKTKGIANKIFTALSKENVNIRMID 409 (446)
T ss_dssp EEEEEEEECGGGSSCTTHHHHHHHHHHHTTCCEEEEE
T ss_pred CeEEEEEECCCccCChhHHHHHHHHHHHCCCCEEEEE
Confidence 4678888875 589999999999999999998654
No 65
>2qmx_A Prephenate dehydratase; APC86053, L-Phe inhibition, PDT, CHL tepidum TLS, structural genomics, PSI-2, protein structure initiative; HET: PHE; 2.30A {Chlorobium tepidum tls}
Probab=74.94 E-value=8.1 Score=36.76 Aligned_cols=56 Identities=14% Similarity=0.148 Sum_probs=44.4
Q ss_pred CcEEEEEEeCCcchHHHHHHHHHHHcCceEeeEEEEc-CCceEEEEEEEecCCCCCCCCc
Q 014457 80 ENTALEVTGVDRPGLMSEISAVLYELGCHVPAAVAWT-HKTRAACIFYIEDGLEGRPITA 138 (424)
Q Consensus 80 ~~t~iev~~~DRpGLLs~I~~vL~~~~~~I~~A~i~T-~~~r~~dvf~V~d~~~g~~i~d 138 (424)
+.|.|-+..+|+||-|+++-.+|+.+|+|+..-+-.. .++...-.|||.= +|. +.|
T Consensus 199 ~ktsl~f~~~~~pGaL~~~L~~Fa~~gINLtkIESRP~~~~~~~Y~FfvD~--eg~-~~d 255 (283)
T 2qmx_A 199 QKTSIVFALPNEQGSLFRALATFALRGIDLTKIESRPSRKKAFEYLFYADF--IGH-RED 255 (283)
T ss_dssp EEEEEEEEEECCTTHHHHHHHHHHTTTCCEEEEEEEECSSSTTEEEEEEEE--ESC-TTS
T ss_pred ceEEEEEEcCCCCchHHHHHHHHHHcCCCeeEEEeeEcCCCCcceEEEEEE--ecC-CCc
Confidence 4678888888999999999999999999998777665 4555678898854 565 334
No 66
>1ib8_A Conserved protein SP14.3; nucleic acid binding protein, ribosomal protein, essential gene, structural genomics; NMR {Streptococcus pneumoniae} SCOP: b.38.2.1 d.52.4.1
Probab=74.05 E-value=16 Score=31.80 Aligned_cols=92 Identities=15% Similarity=0.183 Sum_probs=63.2
Q ss_pred HHHHHHHHHHhCCceEEEEEEEeeCCeEEEEEEEeecCCCCCCCHHHHHHHHHHHHHHHhhc----CCCceEEEEEeC--
Q 014457 235 LLFDTLCALTDLQYVVFHAAISSKGCFADQEYFIRQTDGCTLDTESQRQKLTQCLIAAIERR----VSHGLRLEICTQ-- 308 (424)
Q Consensus 235 LL~~i~~~L~~~gl~I~~A~I~T~~~~a~d~F~V~~~~g~~~~~~~~~~~l~~~L~~al~rr----~~~~~~lev~~~-- 308 (424)
+..-+..++.. ||.+.+..+...++..+-..||..+.|-.+ +.++.+-+.|.+.|.+. .+..|.|||+++
T Consensus 14 v~~li~p~~~~-g~eLvdve~~~~g~~~~LrV~ID~~~gi~l---ddC~~vSr~is~~LD~~~~d~i~~~Y~LEVSSPGl 89 (164)
T 1ib8_A 14 VREVVEPVIEA-PFELVDIEYGKIGSDMILSIFVDKPEGITL---NDTADLTEMISPVLDTIKPDPFPEQYFLEITSPGL 89 (164)
T ss_dssp HHHHHHHHHCS-SSEEEEEEEEEETTEEEEEEEEECSSCCCH---HHHHHHHHHHGGGTTTCCSCCCCSCEEEEEECCSS
T ss_pred HHHHHHHHHcC-CcEEEEEEEEecCCCcEEEEEEECCCCCCH---HHHHHHHHHHHHHhccccccCCCCCeEEEEeCCCC
Confidence 44445566667 999999999887765444556755555333 68999999999888832 346899999988
Q ss_pred CCCchHHHHHHHHHHCCceEEEEEEee
Q 014457 309 NRMGLLSDVTRAFRENGLSVSMAEIGT 335 (424)
Q Consensus 309 DrpGLL~~Itr~l~e~gl~I~~A~i~T 335 (424)
||| |..--.+-+-.|-.| +|.+
T Consensus 90 dRp--L~~~~df~r~~G~~V---~V~l 111 (164)
T 1ib8_A 90 ERP--LKTKDAVAGAVGKYI---HVGL 111 (164)
T ss_dssp SSC--CSSHHHHHHHCSEEE---EEEC
T ss_pred CCC--CCCHHHHHHhCCcEE---EEEE
Confidence 565 555555556666544 4555
No 67
>3luy_A Probable chorismate mutase; structural genomics, APC38059, 3-phenylp PSI-2, protein structure initiative; HET: PPY; 2.00A {Bifidobacterium adolescentis}
Probab=72.26 E-value=21 Score=34.68 Aligned_cols=57 Identities=11% Similarity=0.169 Sum_probs=42.1
Q ss_pred CcEEEEEEeC--CcchHHHHHHHHHHHcCceEeeEEEEc-CCceEEEEEEEecCCCCCCCCcH
Q 014457 80 ENTALEVTGV--DRPGLMSEISAVLYELGCHVPAAVAWT-HKTRAACIFYIEDGLEGRPITAP 139 (424)
Q Consensus 80 ~~t~iev~~~--DRpGLLs~I~~vL~~~~~~I~~A~i~T-~~~r~~dvf~V~d~~~g~~i~d~ 139 (424)
+.+.+.+..+ |+||-|+++-.+|+.+|+|+..-+-.. .++...-+|||.= +|. +.|+
T Consensus 205 ~kts~i~~~~~~~~pGaL~~~L~~Fa~~gINLtkIESRP~~~~~~~Y~FfiD~--eg~-~~d~ 264 (329)
T 3luy_A 205 EYESVLTLIPLVTGPGVLANLLDVFRDAGLNMTSFISRPIKGRTGTYSFIVTL--DAA-PWEE 264 (329)
T ss_dssp CEEEEEEEECSCCSTTHHHHHHHHHHHTTCCEEEEEEEEETTEEEEEEEEEEE--SSC-TTSH
T ss_pred CceEEEEEecCCCCCCHHHHHHHHHHHCCcceEEEEeeECCCCCccEEEEEEE--eCC-cCCH
Confidence 3455555555 799999999999999999998777655 5566677888854 565 4443
No 68
>3mtj_A Homoserine dehydrogenase; rossmann-fold, PSI, MCSG, structural genomics, midwest cente structural genomics; 2.15A {Thiobacillus denitrificans}
Probab=71.72 E-value=5.3 Score=40.57 Aligned_cols=50 Identities=20% Similarity=0.336 Sum_probs=36.2
Q ss_pred CcEEEEEEeCCcchHHHHHHHHHHHcCceEeeEEEEcC--CceEEEEEEEec
Q 014457 80 ENTALEVTGVDRPGLMSEISAVLYELGCHVPAAVAWTH--KTRAACIFYIED 129 (424)
Q Consensus 80 ~~t~iev~~~DRpGLLs~I~~vL~~~~~~I~~A~i~T~--~~r~~dvf~V~d 129 (424)
...-|.+...|+||.|++|+++|.++|++|.+..-.-. ++..+.++.+|.
T Consensus 358 ~~yy~r~~~~d~~gvl~~i~~~~~~~~isi~~~~q~~~~~~~~~~~~v~~th 409 (444)
T 3mtj_A 358 TAYYLRLRAFDRPGVLADITRILADSSISIDAMVQKEPAEGEEQVDIILLTH 409 (444)
T ss_dssp EEEEEEEEEC-CCHHHHHHHHHHHHTTCCEEEEEECC------CEEEEEEEC
T ss_pred eeeEEEEEecCcccHHHHHHHHHHhcCCceeEEeecccccCCCCceEEEEec
Confidence 34578888999999999999999999999987654332 122356677776
No 69
>3mwb_A Prephenate dehydratase; L-Phe, PSI, MCSG, structural genomics, midwest center for ST genomics, protein structure initiative, lyase; HET: MSE PHE; 2.00A {Arthrobacter aurescens}
Probab=69.29 E-value=10 Score=36.59 Aligned_cols=57 Identities=21% Similarity=0.298 Sum_probs=43.4
Q ss_pred CcEEEEEEeC-CcchHHHHHHHHHHHcCceEeeEEEEc-CCceEEEEEEEecCCCCCCCCcH
Q 014457 80 ENTALEVTGV-DRPGLMSEISAVLYELGCHVPAAVAWT-HKTRAACIFYIEDGLEGRPITAP 139 (424)
Q Consensus 80 ~~t~iev~~~-DRpGLLs~I~~vL~~~~~~I~~A~i~T-~~~r~~dvf~V~d~~~g~~i~d~ 139 (424)
+.|.|-+..+ |+||-|+++-.+|+.+|+|+..-+-.- .++...-+|||.= +|. +.|+
T Consensus 200 ~kTSl~f~~~~~~pGaL~~~L~~Fa~~gINLtkIESRP~~~~~~~Y~FfiD~--eg~-~~d~ 258 (313)
T 3mwb_A 200 DKTTVVVPLPEDHPGALMEILDQFASRGVNLSRIESRPTGQYLGHYFFSIDA--DGH-ATDS 258 (313)
T ss_dssp EEEEEEEECSSCCTTHHHHHHHHHHTTTCCEEEEEEEECSSSTTSEEEEEEE--ESC-TTSH
T ss_pred CeEEEEEEeCCCCCCHHHHHHHHHHHCCccEEEEEEeecCCCCccEEEEEEE--eCC-CCcH
Confidence 4688888886 999999999999999999998766654 4444567888854 565 4443
No 70
>2qmw_A PDT, prephenate dehydratase; APC85812, prephenate dehydratase (PDT), staphylococcus aureu aureus MU50, structural genomics, PSI-2; 2.30A {Staphylococcus aureus subsp} SCOP: c.94.1.1 d.58.18.3
Probab=64.22 E-value=19 Score=33.79 Aligned_cols=51 Identities=14% Similarity=0.236 Sum_probs=41.4
Q ss_pred CCcEEEEEEe---CCcchHHHHHHHHHHHcCceEeeEEEEc-CCceEEEEEEEec
Q 014457 79 TENTALEVTG---VDRPGLMSEISAVLYELGCHVPAAVAWT-HKTRAACIFYIED 129 (424)
Q Consensus 79 ~~~t~iev~~---~DRpGLLs~I~~vL~~~~~~I~~A~i~T-~~~r~~dvf~V~d 129 (424)
.+.|.|-+.. +|+||-|+++-.+|+.+|+|+..-+-.. .++...-.|||.=
T Consensus 184 ~~ktsl~f~~~~~~~~pGaL~~~L~~Fa~~gINLtkIESRP~~~~~~~Y~FfiD~ 238 (267)
T 2qmw_A 184 QNATSLMFLITPMHDKPGLLASVLNTFALFNINLSWIESRPLKTQLGMYRFFVQA 238 (267)
T ss_dssp SSCSEEEEEEEESSCCTTHHHHHHHHHHTTTCCEEEEEEEECSSSTTCEEEEEEE
T ss_pred CCeEEEEEEcCCCCCCcChHHHHHHHHHHcCCCeeEEEEeecCCCCccEEEEEEE
Confidence 4567777777 8999999999999999999998777665 4455677888864
No 71
>2cdq_A Aspartokinase; aspartate kinase, amino acid metabolism, ACT domain, alloste S-adenosylmethionine, lysine, allosteric effector, plant; HET: TAR SAM LYS; 2.85A {Arabidopsis thaliana} SCOP: c.73.1.3 d.58.18.10 d.58.18.10
Probab=63.25 E-value=49 Score=33.94 Aligned_cols=33 Identities=21% Similarity=0.468 Sum_probs=29.0
Q ss_pred CcEEEEEEe---CCcchHHHHHHHHHHHcCceEeeE
Q 014457 80 ENTALEVTG---VDRPGLMSEISAVLYELGCHVPAA 112 (424)
Q Consensus 80 ~~t~iev~~---~DRpGLLs~I~~vL~~~~~~I~~A 112 (424)
+.+.|+|.+ .++||.+++|..+|+++|+||.--
T Consensus 340 ~~~~I~i~~~~m~~~~g~~~~if~~la~~~I~vd~I 375 (510)
T 2cdq_A 340 NVTMLDIASTRMLGQVGFLAKVFSIFEELGISVDVV 375 (510)
T ss_dssp EEEEEEEECGGGTTCTTHHHHHHHHHHHTTCCEEEE
T ss_pred CeEEEEEEcCCCCCcccHHHHHHHHHHHcCCcEEEE
Confidence 567888886 679999999999999999999866
No 72
>1phz_A Protein (phenylalanine hydroxylase); aromatic amino acid hydroxylase, phosphorylation, intrasteric regulation, allosteric regulation; 2.20A {Rattus norvegicus} SCOP: d.58.18.3 d.178.1.1 PDB: 2phm_A
Probab=43.04 E-value=26 Score=35.22 Aligned_cols=52 Identities=8% Similarity=0.079 Sum_probs=41.8
Q ss_pred CCCcEEEEEEeCCcchHHHHHHHHHHHcCceEeeEEEEc-CCceEEEEEEEec
Q 014457 78 STENTALEVTGVDRPGLMSEISAVLYELGCHVPAAVAWT-HKTRAACIFYIED 129 (424)
Q Consensus 78 ~~~~t~iev~~~DRpGLLs~I~~vL~~~~~~I~~A~i~T-~~~r~~dvf~V~d 129 (424)
....|.|-+..+|+||-|+++-.+|+.+|+|+..-+--- .++...-.|||.=
T Consensus 31 g~dKTSLiFsl~n~pGAL~~~L~~Fa~~gINLTkIESRPsk~~~~eY~FfVD~ 83 (429)
T 1phz_A 31 QNGAISLIFSLKEEVGALAKVLRLFEENDINLTHIESRPSRLNKDEYEFFTYL 83 (429)
T ss_dssp SSCCEEEEEEEECCTTHHHHHHHHHHTTTCCTTSEEEEECSSCTTEEEEEECB
T ss_pred CCCeEEEEEEeCCCccHHHHHHHHHHHcCCceEEEEeeecCCCCccEEEEEEE
Confidence 345788888889999999999999999999998766554 4445677888854
No 73
>3g12_A Putative lactoylglutathione lyase; glyoxalase, bleomycin resistance, PSI-2, NYSGXRC, structural genomics; 2.58A {Bdellovibrio bacteriovorus HD100}
Probab=42.51 E-value=58 Score=25.80 Aligned_cols=49 Identities=12% Similarity=0.089 Sum_probs=35.9
Q ss_pred CeEEEEEEecCChhHHHHHHHHHHhCCce-EEEEEEEeeCCeEEEEEEEeecCCCCC
Q 014457 221 GYSVVNIKCIDRPKLLFDTLCALTDLQYV-VFHAAISSKGCFADQEYFIRQTDGCTL 276 (424)
Q Consensus 221 ~~tvV~V~~~DRpgLL~~i~~~L~~~gl~-I~~A~I~T~~~~a~d~F~V~~~~g~~~ 276 (424)
+...+.+.+.| +..+...|...|+. +...-.....|.. |+++|++|..+
T Consensus 66 ~~~~l~f~v~d----vd~~~~~l~~~G~~~~~~~p~~~~~G~~---~~~~DPdGn~i 115 (128)
T 3g12_A 66 PSLQLGFQITD----LEKTVQELVKIPGAMCILDPTDMPDGKK---AIVLDPDGHSI 115 (128)
T ss_dssp CSEEEEEEESC----HHHHHHHHTTSTTCEEEEEEEECC-CEE---EEEECTTCCEE
T ss_pred CceEEEEEeCC----HHHHHHHHHHCCCceeccCceeCCCccE---EEEECCCCCEE
Confidence 45678888888 78888899999999 7654433333433 89999999854
No 74
>2j0w_A Lysine-sensitive aspartokinase 3; feedback inhibition, allosteric regulation, ACT domain, transferase, amino acid biosynthesis; HET: ADP; 2.5A {Escherichia coli} SCOP: c.73.1.3 d.58.18.10 d.58.18.10 PDB: 2j0x_A*
Probab=41.76 E-value=13 Score=37.63 Aligned_cols=134 Identities=11% Similarity=0.134 Sum_probs=81.3
Q ss_pred CeEEEEEEe---cCChhHHHHHHHHHHhCCceEEEEEEEeeCCeEEEEEEEeecCCCCCCCHHHHHHHHHHHHHHHhhcC
Q 014457 221 GYSVVNIKC---IDRPKLLFDTLCALTDLQYVVFHAAISSKGCFADQEYFIRQTDGCTLDTESQRQKLTQCLIAAIERRV 297 (424)
Q Consensus 221 ~~tvV~V~~---~DRpgLL~~i~~~L~~~gl~I~~A~I~T~~~~a~d~F~V~~~~g~~~~~~~~~~~l~~~L~~al~rr~ 297 (424)
+.+.|+|.+ .+.||.++++..+|++.+++|..-. +. + .--+|+|...+...-......+++...|...-.-..
T Consensus 307 ~~~~i~i~~~~m~~~~g~~~~if~~l~~~~i~vd~i~--ss-~-~sis~~v~~~~~~~~~~~~~~~~~~~el~~~~~v~~ 382 (449)
T 2j0w_A 307 NQTLLTLHSLNMLHSRGFLAEVFGILARHNISVDLIT--TS-E-VSVALTLDTTGSTSTGDTLLTQSLLMELSALCRVEV 382 (449)
T ss_dssp EEEEEEECCCSCSCHHHHHHHHTTTTTTTTCCCSEEE--EE-T-TEEEEEECCCCCSSTTCCSSCHHHHHHHHHHSCEEE
T ss_pred CEEEEEEEecCCCCccCHHHHHHHHHHHcCCCEEEEE--eC-C-CeEEEEEeccccchhhHHHHHHHHHHHhccCCeEEE
Confidence 567888876 4789999999999999999998766 21 2 223477754332110001234555555554111011
Q ss_pred -CCceEEEEEeC---CCCchHHHHHHHHHHCCceEEEEEEeecCCceeeEEEEEeCCCCCCChHHHHHHHHHH
Q 014457 298 -SHGLRLEICTQ---NRMGLLSDVTRAFRENGLSVSMAEIGTNGEKATGSFYVMDASGHDVNQRTVELLKQEI 366 (424)
Q Consensus 298 -~~~~~lev~~~---DrpGLL~~Itr~l~e~gl~I~~A~i~T~g~~a~d~Fyv~d~~g~~v~~~~~~~lr~~l 366 (424)
++-..+.|.+. ..||+.+++..+|.+ +||... ++|....+.=+|.+... ..+.+..|.++|
T Consensus 383 ~~~~a~vsvVG~gm~~~~gv~~~~f~aL~~--ini~mI---sqg~Se~~Is~vV~~~d---~~~Av~~lh~~f 447 (449)
T 2j0w_A 383 EEGLALVALIGNDLSKACGVGKEVFGVLEP--FNIRMI---CYGASSHNLCFLVPGED---AEQVVQKLHSNL 447 (449)
T ss_dssp EEEEEEEEEEESSCTTSSSHHHHHHSSCTT--SCCCEE---EESSCTTEEEEEEEGGG---HHHHHHHHHHHH
T ss_pred eCCeEEEEEECCCccccccHHHHHHHHHhC--CCeEEE---EecCCCcEEEEEEeHHH---HHHHHHHHHHHH
Confidence 12457788877 589999999999966 777652 46666666555545421 123556665554
No 75
>1zhv_A Hypothetical protein ATU0741; NESG, ATR8, structural genomics, PSI, protein struc initiative; 1.50A {Agrobacterium tumefaciens str} SCOP: d.58.18.8 d.58.18.8
Probab=39.84 E-value=18 Score=30.43 Aligned_cols=28 Identities=18% Similarity=0.383 Sum_probs=25.3
Q ss_pred CCCCchHHHHHHHHHHCCceEEEEEEeecC
Q 014457 308 QNRMGLLSDVTRAFRENGLSVSMAEIGTNG 337 (424)
Q Consensus 308 ~DrpGLL~~Itr~l~e~gl~I~~A~i~T~g 337 (424)
.|-.|+++.|+..|++.||+|.- |+|+.
T Consensus 73 ~~~vGilA~is~pLA~agIsif~--iSty~ 100 (134)
T 1zhv_A 73 FDETGIVLSVISPLSTNGIGIFV--VSTFD 100 (134)
T ss_dssp CSSCCHHHHHHHHHHTTTCCCEE--EECSS
T ss_pred ccHHHHHHHHHHHHHhCCCCeEE--EEecc
Confidence 48899999999999999999988 88874
No 76
>3mah_A Aspartokinase; aspartate kinase, structural genomics, MCSG, transferase, PSI-2; 2.31A {Porphyromonas gingivalis}
Probab=38.24 E-value=21 Score=30.23 Aligned_cols=47 Identities=13% Similarity=0.089 Sum_probs=34.0
Q ss_pred CCcEEEEEEe---CCcchHHHHHHHHHHHcCceEeeEEEEcCCceEEEEEEEec
Q 014457 79 TENTALEVTG---VDRPGLMSEISAVLYELGCHVPAAVAWTHKTRAACIFYIED 129 (424)
Q Consensus 79 ~~~t~iev~~---~DRpGLLs~I~~vL~~~~~~I~~A~i~T~~~r~~dvf~V~d 129 (424)
.+.+.|+|.+ +|+||.+++|..+|+++|+||.--. |.. ..-.|.|.+
T Consensus 16 ~~va~Iti~~~~m~~~~g~~~~if~~La~~~I~vd~I~--~s~--~~Isf~v~~ 65 (157)
T 3mah_A 16 DGITVIKVKSSNKLLSWHFMRKLFEIFEFYQEPVDMVA--TSE--VGVSLTIDN 65 (157)
T ss_dssp EEEEEEEEEECTTSCHHHHHHHHHHHHHHTTCCCSCEE--CCS--SEEEEEESC
T ss_pred CCEEEEEEEeCCCCCchhHHHHHHHHHHHcCCCEEEEE--ecC--CEEEEEECC
Confidence 4567888885 4789999999999999999996543 321 134555644
No 77
>1zvp_A Hypothetical protein VC0802; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG, U function; 2.20A {Vibrio cholerae} SCOP: d.58.18.9 d.58.18.9
Probab=37.12 E-value=23 Score=29.69 Aligned_cols=30 Identities=20% Similarity=0.340 Sum_probs=25.3
Q ss_pred EeCCCCchHHHHHHHHHHCCceEEEEEEeecC
Q 014457 306 CTQNRMGLLSDVTRAFRENGLSVSMAEIGTNG 337 (424)
Q Consensus 306 ~~~DrpGLL~~Itr~l~e~gl~I~~A~i~T~g 337 (424)
.+.|-.|+++.|+..|++.||+|.- |+|+-
T Consensus 80 ~~l~~vGi~a~is~~LA~agIsif~--iSty~ 109 (133)
T 1zvp_A 80 SSLEAVGLTAAFATKLAEHGISANV--IAGYY 109 (133)
T ss_dssp C--CCSCHHHHHHHHHHHTTCCCEE--EECSS
T ss_pred CCccHHHHHHHHHHHHHhCCCCcEE--EEecc
Confidence 3469999999999999999999988 77774
No 78
>3g12_A Putative lactoylglutathione lyase; glyoxalase, bleomycin resistance, PSI-2, NYSGXRC, structural genomics; 2.58A {Bdellovibrio bacteriovorus HD100}
Probab=33.10 E-value=1.1e+02 Score=24.11 Aligned_cols=50 Identities=12% Similarity=0.062 Sum_probs=36.4
Q ss_pred CCcEEEEEEeCCcchHHHHHHHHHHHcCce-EeeEEEEcCCceEEEEEEEecCCCCCCC
Q 014457 79 TENTALEVTGVDRPGLMSEISAVLYELGCH-VPAAVAWTHKTRAACIFYIEDGLEGRPI 136 (424)
Q Consensus 79 ~~~t~iev~~~DRpGLLs~I~~vL~~~~~~-I~~A~i~T~~~r~~dvf~V~d~~~g~~i 136 (424)
..++.+.+...| +....+-|.+.|+. +...-.....|+. |++.|| +|+.|
T Consensus 65 ~~~~~l~f~v~d----vd~~~~~l~~~G~~~~~~~p~~~~~G~~---~~~~DP-dGn~i 115 (128)
T 3g12_A 65 IPSLQLGFQITD----LEKTVQELVKIPGAMCILDPTDMPDGKK---AIVLDP-DGHSI 115 (128)
T ss_dssp CCSEEEEEEESC----HHHHHHHHTTSTTCEEEEEEEECC-CEE---EEEECT-TCCEE
T ss_pred CCceEEEEEeCC----HHHHHHHHHHCCCceeccCceeCCCccE---EEEECC-CCCEE
Confidence 346778888888 78888899999999 7665444444443 889995 88754
No 79
>3r6a_A Uncharacterized protein; PSI biology, structural genomics, NEW YORK structural genomi research consortium, putative glyoxalase I; 1.76A {Methanosarcina mazei}
Probab=28.56 E-value=1.2e+02 Score=24.52 Aligned_cols=46 Identities=13% Similarity=0.172 Sum_probs=33.8
Q ss_pred EEEEEeCCCCchHHHHHHHHHHCCceEEEEEEeecCCceeeEEEEEeCCCCCC
Q 014457 302 RLEICTQNRMGLLSDVTRAFRENGLSVSMAEIGTNGEKATGSFYVMDASGHDV 354 (424)
Q Consensus 302 ~lev~~~DrpGLL~~Itr~l~e~gl~I~~A~i~T~g~~a~d~Fyv~d~~g~~v 354 (424)
.+.+...| +..+.+.|.+.|+.+...-.....+ -.||+.|++|+.+
T Consensus 68 hl~f~V~d----~d~~~~~l~~~G~~v~~~p~~~~~G---~~~~~~DPdG~~i 113 (144)
T 3r6a_A 68 QATFLVDS----LDKFKTFLEENGAEIIRGPSKVPTG---RNMTVRHSDGSVI 113 (144)
T ss_dssp CEEEEESC----HHHHHHHHHHTTCEEEEEEEEETTE---EEEEEECTTSCEE
T ss_pred EEEEEeCC----HHHHHHHHHHcCCEEecCCccCCCc---eEEEEECCCCCEE
Confidence 45555666 6778888999999987765443332 4689999999876
No 80
>1rwu_A Hypothetical UPF0250 protein YBED; mixed alpha-beta fold, structural genomics, protein structure initiative, PSI; NMR {Escherichia coli} SCOP: d.58.54.1
Probab=28.25 E-value=2.3e+02 Score=22.64 Aligned_cols=62 Identities=18% Similarity=0.102 Sum_probs=44.8
Q ss_pred eEEEEEEecCChhHHHHHHHHHHhC---CceEEEEEEEeeCCeEEEEEEEeecCCCCCCCHHHHHHHHHHHH
Q 014457 222 YSVVNIKCIDRPKLLFDTLCALTDL---QYVVFHAAISSKGCFADQEYFIRQTDGCTLDTESQRQKLTQCLI 290 (424)
Q Consensus 222 ~tvV~V~~~DRpgLL~~i~~~L~~~---gl~I~~A~I~T~~~~a~d~F~V~~~~g~~~~~~~~~~~l~~~L~ 290 (424)
.+.+.|.+++.+++...|..++..+ ++++ ..+-++.|.|.--...| ...+.++++.|-+.|.
T Consensus 36 ~y~~KvIG~a~~~~~~~V~~vv~~~~p~d~~~-~~r~Ss~GkY~Svtv~v------~v~S~eQv~aiY~~L~ 100 (109)
T 1rwu_A 36 PFTYKVMGQALPELVDQVVEVVQRHAPGDYTP-TVKPSSKGNYHSVSITI------NATHIEQVETLYEELG 100 (109)
T ss_dssp CEEEEEEEECCTTHHHHHHHHHHHHSSSCCCE-EEEESSCSSEEEEEEEE------CCSSHHHHHHHHHHHS
T ss_pred CceEEEEEECcHHHHHHHHHHHHHhCCCCCCc-eecCCCCCeEEEEEEEE------EECCHHHHHHHHHHHh
Confidence 4689999999999999999999988 7887 33555566676555444 3445566776666653
No 81
>1tdj_A Biosynthetic threonine deaminase; allostery, cooperative, tetramer, regulation, pyridoxal PHOS isoleucine biosynthesis; HET: PLP; 2.80A {Escherichia coli} SCOP: c.79.1.1 d.58.18.2 d.58.18.2
Probab=25.58 E-value=1.5e+02 Score=30.43 Aligned_cols=111 Identities=10% Similarity=0.007 Sum_probs=70.8
Q ss_pred eEEEEEEecCChhHHHHHHHHHHhCCceEEEEEEEeeCCeEEEEEEEeecCCCCCCCHHHHHHHHHHHHHH-H-------
Q 014457 222 YSVVNIKCIDRPKLLFDTLCALTDLQYVVFHAAISSKGCFADQEYFIRQTDGCTLDTESQRQKLTQCLIAA-I------- 293 (424)
Q Consensus 222 ~tvV~V~~~DRpgLL~~i~~~L~~~gl~I~~A~I~T~~~~a~d~F~V~~~~g~~~~~~~~~~~l~~~L~~a-l------- 293 (424)
...+.|.-+||||-|.+++..|. +-||.+-.=.........++......+. .+..+.|.+.|++. +
T Consensus 338 ~~~~~v~~p~~pg~l~~~~~~l~--~~~i~~~~~~~~~~~~~~~~~~~e~~~~----~~~~~~~~~~l~~~g~~~~~~~~ 411 (514)
T 1tdj_A 338 EALLAVTIPEEKGSFLKFCQLLG--GRSVTEFNYRFADAKNACIFVGVRLSRG----LEERKEILQMLNDGGYSVVDLSD 411 (514)
T ss_dssp EEEEEEECCBSSSCSHHHHHTTS--SSEEEEEEEECCCSSBCEEEEEEECSST----HHHHHHHHHHHTSSSCEEETTSS
T ss_pred cccccccCCCCCchHHHHHHHhC--CCceEEEEeeccCCCeEEEEEEEEeCCc----HHHHHHHHHHHHhCCCCeEECCC
Confidence 35677889999999999999888 6777765543222112233333332221 35677777777543 1
Q ss_pred ------------hhcCC---CceEEEEEeCCCCchHHHHHHHHHHCCceEEEEEEeecCCc
Q 014457 294 ------------ERRVS---HGLRLEICTQNRMGLLSDVTRAFRENGLSVSMAEIGTNGEK 339 (424)
Q Consensus 294 ------------~rr~~---~~~~lev~~~DrpGLL~~Itr~l~e~gl~I~~A~i~T~g~~ 339 (424)
..|.+ +-......=+.|||-|.+....|.. +-||+-.+-..+|..
T Consensus 412 ~~~~~~h~~~~~g~~~~~~~~e~~~~~~fpe~~gal~~fl~~~~~-~~~i~~~~yr~~g~~ 471 (514)
T 1tdj_A 412 DEMAKLHVRYMVGGRPSHPLQERLYSFEFPESPGALLRFLNTLGT-YWNISLFHYRSHGTD 471 (514)
T ss_dssp CHHHHHTGGGTCCCCCSSCCCCEEEEEECCCCTTHHHHHHHHHCS-CCCCCEEECBCTTTC
T ss_pred CHHHHHHHHHhhCCcCccCCCceEEEEeCCCCCCHHHHHHHhcCC-CceEEEEeecCCCCC
Confidence 01222 2345677789999999999999874 466666667777744
No 82
>3r6a_A Uncharacterized protein; PSI biology, structural genomics, NEW YORK structural genomi research consortium, putative glyoxalase I; 1.76A {Methanosarcina mazei}
Probab=25.26 E-value=1.4e+02 Score=24.10 Aligned_cols=47 Identities=11% Similarity=0.050 Sum_probs=33.7
Q ss_pred EEEEEEecCChhHHHHHHHHHHhCCceEEEEEEEeeCCeEEEEEEEeecCCCCC
Q 014457 223 SVVNIKCIDRPKLLFDTLCALTDLQYVVFHAAISSKGCFADQEYFIRQTDGCTL 276 (424)
Q Consensus 223 tvV~V~~~DRpgLL~~i~~~L~~~gl~I~~A~I~T~~~~a~d~F~V~~~~g~~~ 276 (424)
..+.+...| +..+...|...|+.|...-.....|+ .||++|++|..+
T Consensus 67 ~hl~f~V~d----~d~~~~~l~~~G~~v~~~p~~~~~G~---~~~~~DPdG~~i 113 (144)
T 3r6a_A 67 TQATFLVDS----LDKFKTFLEENGAEIIRGPSKVPTGR---NMTVRHSDGSVI 113 (144)
T ss_dssp CCEEEEESC----HHHHHHHHHHTTCEEEEEEEEETTEE---EEEEECTTSCEE
T ss_pred eEEEEEeCC----HHHHHHHHHHcCCEEecCCccCCCce---EEEEECCCCCEE
Confidence 445556666 56677889999999887655554443 489999999754
No 83
>1zvp_A Hypothetical protein VC0802; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG, U function; 2.20A {Vibrio cholerae} SCOP: d.58.18.9 d.58.18.9
Probab=24.69 E-value=68 Score=26.74 Aligned_cols=47 Identities=15% Similarity=0.160 Sum_probs=34.4
Q ss_pred CCCcEEEEEEe---CCcchHHHHHHHHHHHcCceEeeEEEEcCCceEEEEEEEec
Q 014457 78 STENTALEVTG---VDRPGLMSEISAVLYELGCHVPAAVAWTHKTRAACIFYIED 129 (424)
Q Consensus 78 ~~~~t~iev~~---~DRpGLLs~I~~vL~~~~~~I~~A~i~T~~~r~~dvf~V~d 129 (424)
...+..|+|.+ .|-.|+++.|++.|++.|++|.-.. |.+ .|-++|..
T Consensus 68 ~~~wr~i~l~~~~~l~~vGi~a~is~~LA~agIsif~iS--ty~---tDhIlVp~ 117 (133)
T 1zvp_A 68 SALFSLITLTVHSSLEAVGLTAAFATKLAEHGISANVIA--GYY---HDHIFVQK 117 (133)
T ss_dssp CSCEEEEEEECCC--CCSCHHHHHHHHHHHTTCCCEEEE--CSS---CEEEEEEG
T ss_pred CCCeEEEEEeccCCccHHHHHHHHHHHHHhCCCCcEEEE--ecc---ccEEEEeh
Confidence 34566677765 6899999999999999999987643 543 45566754
No 84
>3rri_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-biology, midwest center for structu genomics; 1.50A {Alicyclobacillus acidocaldarius subsp}
Probab=24.00 E-value=1.1e+02 Score=23.74 Aligned_cols=51 Identities=12% Similarity=0.270 Sum_probs=34.5
Q ss_pred EEEEeCCCCchHHHHHHHHHHCCceEEEEEEee-cCCc-eeeEEEEEeCCCCCC
Q 014457 303 LEICTQNRMGLLSDVTRAFRENGLSVSMAEIGT-NGEK-ATGSFYVMDASGHDV 354 (424)
Q Consensus 303 lev~~~DrpGLL~~Itr~l~e~gl~I~~A~i~T-~g~~-a~d~Fyv~d~~g~~v 354 (424)
+.+...++ .=+..+.+.|.+.|+.+...-... .|.. ..-.||+.|++|+.+
T Consensus 71 ~~~~~~~~-~d~~~~~~~l~~~G~~~~~~p~~~~~~~~~~~~~~~~~DPdGn~i 123 (135)
T 3rri_A 71 FGITFRDK-KHFDNLYKLAKQRGIPFYHDLSRRFEGLIEEHETFFLIDPSNNLL 123 (135)
T ss_dssp EEEECSSH-HHHHHHHHHHHHTTCCEEEEEEEESTTSTTCEEEEEEECTTCCEE
T ss_pred EEEEEcCh-HhHHHHHHHHHHcCCceecCcccccCCCCCceEEEEEECCCCCEE
Confidence 33434433 447778888999999987755543 3433 345799999999875
No 85
>3kol_A Oxidoreductase, glyoxalase/bleomycin resistance protein/dioxygenase; metal ION binding, NYSGXRC, PSI2, structural genomics; 1.90A {Nostoc punctiforme pcc 73102}
Probab=21.64 E-value=1.1e+02 Score=24.22 Aligned_cols=38 Identities=13% Similarity=0.296 Sum_probs=27.9
Q ss_pred HHHHHHHHHHCCceEEEEEEeecCCceeeEEEEEeCCCCCC
Q 014457 314 LSDVTRAFRENGLSVSMAEIGTNGEKATGSFYVMDASGHDV 354 (424)
Q Consensus 314 L~~Itr~l~e~gl~I~~A~i~T~g~~a~d~Fyv~d~~g~~v 354 (424)
+..+.+.|.+.|+.+...-....+. ..||+.|++|+.+
T Consensus 109 ~~~~~~~l~~~G~~~~~~~~~~~~g---~~~~~~DPdG~~i 146 (156)
T 3kol_A 109 FDRAVTVIGENKIAIAHGPVTRPTG---RGVYFYDPDGFMI 146 (156)
T ss_dssp HHHHHHHHHHTTCCEEEEEEEC-CC---EEEEEECTTSCEE
T ss_pred HHHHHHHHHHCCCccccCceecCCc---cEEEEECCCCCEE
Confidence 6777788899999997654443222 3899999999865
No 86
>1zhv_A Hypothetical protein ATU0741; NESG, ATR8, structural genomics, PSI, protein struc initiative; 1.50A {Agrobacterium tumefaciens str} SCOP: d.58.18.8 d.58.18.8
Probab=20.62 E-value=51 Score=27.59 Aligned_cols=45 Identities=13% Similarity=0.179 Sum_probs=33.3
Q ss_pred CcEEEEEEeC---CcchHHHHHHHHHHHcCceEeeEEEEcCCceEEEEEEEec
Q 014457 80 ENTALEVTGV---DRPGLMSEISAVLYELGCHVPAAVAWTHKTRAACIFYIED 129 (424)
Q Consensus 80 ~~t~iev~~~---DRpGLLs~I~~vL~~~~~~I~~A~i~T~~~r~~dvf~V~d 129 (424)
.+-.|+|.++ |-.|+++.|++.|++.|++|... +|.+ -|-++|..
T Consensus 61 ~wr~i~v~~~l~~~~vGilA~is~pLA~agIsif~i--Sty~---tD~IlVp~ 108 (134)
T 1zhv_A 61 GWSCFKFQGPFAFDETGIVLSVISPLSTNGIGIFVV--STFD---GDHLLVRS 108 (134)
T ss_dssp EEEEEEECSCCCCSSCCHHHHHHHHHHTTTCCCEEE--ECSS---CEEEEEEG
T ss_pred CeEEEEEecCCCccHHHHHHHHHHHHHhCCCCeEEE--Eecc---ccEEEEeH
Confidence 3455666655 88899999999999999988753 3544 46677754
No 87
>3zw5_A Glyoxalase domain-containing protein 5; lyase; 1.60A {Homo sapiens}
Probab=20.21 E-value=88 Score=25.15 Aligned_cols=42 Identities=14% Similarity=0.278 Sum_probs=30.9
Q ss_pred hHHHHHHHHHHCCceEEEEEEeecCCc-eeeEEEEEeCCCCCC
Q 014457 313 LLSDVTRAFRENGLSVSMAEIGTNGEK-ATGSFYVMDASGHDV 354 (424)
Q Consensus 313 LL~~Itr~l~e~gl~I~~A~i~T~g~~-a~d~Fyv~d~~g~~v 354 (424)
=|..+.+.|.+.|+.+........+.. ..-.||+.|++|..+
T Consensus 100 dl~~~~~~l~~~G~~~~~~p~~~~~~~g~~~~~~~~DPdGn~i 142 (147)
T 3zw5_A 100 PLEEMIQHLKACDVPIEEGPVPRTGAKGPIMSIYFRDPDRNLI 142 (147)
T ss_dssp CHHHHHHHHHHTTCCCCEEEEEEEETTEEEEEEEEECTTCCEE
T ss_pred CHHHHHHHHHHcCCceeeCcccccCCCCceEEEEEECCCCCEE
Confidence 367777889999999986555444443 335799999999865
Done!