Query 014458
Match_columns 424
No_of_seqs 266 out of 1815
Neff 8.4
Searched_HMMs 46136
Date Fri Mar 29 05:19:28 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/014458.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/014458hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG4567 GTPase-activating prot 100.0 4.6E-45 1E-49 334.7 22.2 295 39-417 11-347 (370)
2 KOG2058 Ypt/Rab GTPase activat 100.0 1.1E-40 2.4E-45 327.1 19.6 236 52-360 146-385 (436)
3 KOG1092 Ypt/Rab-specific GTPas 100.0 1.1E-39 2.5E-44 310.0 17.1 252 50-408 176-452 (484)
4 smart00164 TBC Domain in Tre-2 100.0 1.2E-39 2.7E-44 297.6 16.8 195 60-322 1-198 (199)
5 KOG2197 Ypt/Rab-specific GTPas 100.0 9.5E-37 2.1E-41 308.5 16.4 381 12-403 25-459 (488)
6 KOG2224 Uncharacterized conser 100.0 4.1E-35 8.9E-40 278.5 17.0 286 22-357 390-712 (781)
7 KOG2223 Uncharacterized conser 100.0 1.7E-34 3.6E-39 274.7 18.5 212 54-323 292-506 (586)
8 COG5210 GTPase-activating prot 100.0 6.4E-34 1.4E-38 293.3 18.7 251 35-354 181-439 (496)
9 PF00566 RabGAP-TBC: Rab-GTPas 100.0 8E-33 1.7E-37 255.0 21.4 147 172-321 46-193 (214)
10 KOG1093 Predicted protein kina 100.0 3.7E-30 8.1E-35 252.9 15.9 181 172-405 390-571 (725)
11 KOG1091 Ypt/Rab-specific GTPas 100.0 1.3E-28 2.7E-33 242.1 15.7 223 66-321 27-309 (625)
12 KOG2222 Uncharacterized conser 100.0 1.2E-28 2.6E-33 237.0 13.0 215 51-336 158-375 (848)
13 KOG2595 Predicted GTPase activ 100.0 3.6E-28 7.8E-33 225.9 11.9 183 172-408 96-283 (395)
14 KOG4347 GTPase-activating prot 99.9 8.3E-28 1.8E-32 240.4 12.0 236 38-395 174-412 (671)
15 KOG4436 Predicted GTPase activ 99.9 6E-25 1.3E-29 223.1 16.5 191 164-409 613-807 (948)
16 KOG1102 Rab6 GTPase activator 99.9 6.3E-23 1.4E-27 204.4 13.7 231 19-321 88-333 (397)
17 KOG2221 PDZ-domain interacting 99.8 1.4E-21 3E-26 171.7 2.8 190 36-297 74-267 (267)
18 KOG4436 Predicted GTPase activ 99.5 7.9E-13 1.7E-17 135.6 14.8 212 55-333 176-397 (948)
19 KOG1648 Uncharacterized conser 99.4 5.9E-14 1.3E-18 136.7 -0.5 224 25-320 521-744 (813)
20 KOG3636 Uncharacterized conser 99.3 6.9E-12 1.5E-16 121.3 10.8 155 196-356 92-250 (669)
21 KOG2801 Probable Rab-GAPs [Int 97.9 0.0003 6.6E-09 65.6 13.1 143 193-336 108-251 (559)
22 PF14961 BROMI: Broad-minded p 96.8 0.022 4.7E-07 63.0 14.3 146 201-398 1088-1250(1296)
23 KOG2224 Uncharacterized conser 96.1 0.0017 3.7E-08 63.6 0.5 33 213-245 566-598 (781)
24 KOG2197 Ypt/Rab-specific GTPas 84.4 0.51 1.1E-05 48.8 1.6 75 35-110 148-223 (488)
25 PF08109 Antimicrobial14: Lact 29.4 38 0.00083 19.9 1.3 14 213-226 3-16 (31)
26 PF13041 PPR_2: PPR repeat fam 20.8 1.2E+02 0.0026 20.0 2.9 26 277-302 24-49 (50)
27 PRK10878 hypothetical protein; 20.2 1.4E+02 0.003 22.3 3.2 29 261-289 21-49 (72)
No 1
>KOG4567 consensus GTPase-activating protein [General function prediction only]
Probab=100.00 E-value=4.6e-45 Score=334.72 Aligned_cols=295 Identities=25% Similarity=0.411 Sum_probs=235.5
Q ss_pred HHHHhcCCC-CCccHHHHHHHHhhCCCC--CCchhhhhhhhhCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhhhhccccC
Q 014458 39 KWQAAFTPE-GQLDIGKTLSRIHRGGIH--PSIRGEVWEFLLGCYEPKSTFDEREEIRQRRRLQYSAWKEECHQIFPVVG 115 (424)
Q Consensus 39 ~W~~~~~~~-~~i~~~kll~~~~~~GIp--~~~R~~vW~~LLg~~p~~~~~~~~~~~~~~~~~~Y~~l~~~~~~~~~~~~ 115 (424)
..++.+.+. ..+|..+ +|..+..|+| +++|+.+|++|||++|++. ..|...+.+.|..|..+.++.-.- .|
T Consensus 11 ~~edvl~~~~~~id~ke-lr~~~~~g~p~~~~lR~~~WkllL~Yl~~er--~~w~s~La~~R~~Y~q~i~e~v~e---pg 84 (370)
T KOG4567|consen 11 SIEDVLNPADDTIDLKE-LRKLCFYGVPDDASLRPLVWKLLLGYLPPER--SKWTSFLAKKRSLYKQFIEEIVDE---PG 84 (370)
T ss_pred hHHHhhccccchhhHHH-HHHHhhcCCCCccchhHhHHHHHHhhcChhh--hhhHHHHHHHHHHHHHHHHHhccC---cc
Confidence 444555543 3378888 7778888999 7899999999999999987 567889999999999998875321 11
Q ss_pred CCcccccccccCCCCCCCCcccccccCCCCCCcchhHHHhhhcCCCchhHHHHHHHHHHHHhhhcCCCCCCcccccCh--
Q 014458 116 SGKFITAPVVTEDGQPIQDPLVLQETNSGISASSSKMVKELLSHGPLDKKVIQWMLTLHQIGLDVIRTDRTLVFYEKQ-- 193 (424)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qI~~Dv~RT~~~~~~f~~~-- 193 (424)
. .......+.....-+.|+.. ...+.|++.+++.+.+.||++||.||.|...+|+..
T Consensus 85 ~--~~~~~~v~~~D~~~dhPls~-------------------~~~sdwn~ff~d~e~l~QIdrDvrr~~pdi~ff~~~~~ 143 (370)
T KOG4567|consen 85 K--KDNSKKVDSNDTDEDHPLSL-------------------GPTSDWNTFFKDCEVLLQIDRDVRRTHPDISFFQLASS 143 (370)
T ss_pred c--cccccccccCcccccCCCCC-------------------CchhhHHHHhhhhHHHHHHHHHHHHhCcchHhhhhccc
Confidence 1 10000000111111112211 123458889999999999999999999999988652
Q ss_pred -h------------------------hHHHHHHHHHHHHhhCCCCCCCCChhHHHHHHHhhcc----------ChhHHHH
Q 014458 194 -E------------------------NLSKLWDILAVYAWVDRDVGYCQGMSDLCSPMIILLE----------NEADAFW 238 (424)
Q Consensus 194 -~------------------------~~~~L~rIL~~~~~~~p~~gY~QGm~~i~a~ll~~~~----------~E~~af~ 238 (424)
+ ......|||+.||..||.+||+||||+|+||+++|+. .|+|||+
T Consensus 144 ~p~~~~~~~~~~i~~~q~~~~n~~gl~~~~~erilfiyAKLNpGi~YVQGMNEIlaPiYYVfa~Dpd~e~~~~aEaDaFF 223 (370)
T KOG4567|consen 144 YPCRQGMDSRRRINASQEAGRNRLGLTRFAAERILFIYAKLNPGIGYVQGMNEILAPIYYVFANDPDEENRAYAEADAFF 223 (370)
T ss_pred cccccchhhHhhhhhhhHhhhcccchhhhHHHHHHHHHhhcCCcchHHhhhHHHhhhhheeeccCCchhhHHhhhhhHHH
Confidence 1 1234578999999999999999999999999999984 3899999
Q ss_pred HHHHHHHHhhccccCC--CChhhHHHHHHHHHHHHHhhCHHHHHHHHhCCCCCcchhHHHHHHhcCcCCChhhHHHHHHH
Q 014458 239 CFERLMRRLRGNFRCT--ESSVGVETQLSNLASITQVIDPKLHQHLETLGGGDYLFAFRMLMVLFRREFSFCDSLYLWEM 316 (424)
Q Consensus 239 ~~~~l~~~~~~~~~~~--~~~~~~~~~~~~~~~ll~~~dp~L~~hl~~~~i~~~~f~~~W~ltlF~~~l~~~~v~riWD~ 316 (424)
||..||..++++|..+ ++..|+...+..+..+|+++|-+||+||+..++.|++|++||+.++++.+||+++++||||.
T Consensus 224 CF~~LMseirDnf~k~LDdS~~GI~~~Msr~~~~lk~~D~EL~~~L~~~~i~PqfyaFRWitLLLsQEF~lpDvi~lWDs 303 (370)
T KOG4567|consen 224 CFTQLMSEIRDNFIKTLDDSVGGIHFLMSRLSELLKKHDEELWRHLEEKEIHPQFYAFRWITLLLSQEFPLPDVIRLWDS 303 (370)
T ss_pred HHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHhhHHHHHHHHhcCCCccchhHHHHHHHHhccCCchhHHHHHHH
Confidence 9999999999999754 45568888899999999999999999999999999999999999999999999999999999
Q ss_pred HHhccCCchHHHHHHHHHhhhccccccCcchhHHhhhhChhhhhhhcCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhc
Q 014458 317 MWALEYDPHLFYLYEEAESAASTKSEGSKAKAKSIRQCGKYERENMKNGAKTSEAPLPISVFLVASVLKDKSSKLLQEAR 396 (424)
Q Consensus 317 ~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ail~~~r~~il~~~~ 396 (424)
+|+.. ...++++++|+||+...|+.|++.
T Consensus 304 l~sD~-------------------------------------------------~rfd~Ll~iCcsmlil~Re~il~~-- 332 (370)
T KOG4567|consen 304 LLSDP-------------------------------------------------QRFDFLLYICCSMLILVRERILEG-- 332 (370)
T ss_pred HhcCh-------------------------------------------------hhhHHHHHHHHHHHHHHHHHHHhc--
Confidence 99952 135699999999999999999954
Q ss_pred CchhHHHHHhhhccccccccc
Q 014458 397 GLDDVVKVSLISHQLTYLINV 417 (424)
Q Consensus 397 ~~dd~~~~~~~~~~~~~~~~~ 417 (424)
+|+.-++++ |+.+++
T Consensus 333 DF~~nmkLL------Q~yp~t 347 (370)
T KOG4567|consen 333 DFTVNMKLL------QNYPTT 347 (370)
T ss_pred chHHHHHHH------hcCCCC
Confidence 999999998 666554
No 2
>KOG2058 consensus Ypt/Rab GTPase activating protein [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=1.1e-40 Score=327.13 Aligned_cols=236 Identities=24% Similarity=0.349 Sum_probs=202.6
Q ss_pred HHHHHHHHhhCCCCCCchhhhhhhhhCCCCCCCCHHHHHHHHHHH-HHHHHHHHHHhhhhccccCCCcccccccccCCCC
Q 014458 52 IGKTLSRIHRGGIHPSIRGEVWEFLLGCYEPKSTFDEREEIRQRR-RLQYSAWKEECHQIFPVVGSGKFITAPVVTEDGQ 130 (424)
Q Consensus 52 ~~kll~~~~~~GIp~~~R~~vW~~LLg~~p~~~~~~~~~~~~~~~-~~~Y~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (424)
.++ ++.++|+|||+++|+.||..+.|... ... +..|+.++..-.. ++
T Consensus 146 s~e-lk~liRkGiP~~~R~~VW~~~~g~~~------------~~~~~~~yq~ll~~~~~------------------~~- 193 (436)
T KOG2058|consen 146 SDE-LKRLIRKGIPPELRGEVWWVLSGARR------------QLNYPGYYQELLRKGDE------------------KK- 193 (436)
T ss_pred cHH-HHHHHHcCCChhhhhHHHHHHhcchh------------hccCchhHHHHHhcCCC------------------cc-
Confidence 344 88899999999999999999999421 111 5667777653110 00
Q ss_pred CCCCcccccccCCCCCCcchhHHHhhhcCCCchhHHHHHHHHHHHHhhhcCCCCCCc-ccccChh--hHHHHHHHHHHHH
Q 014458 131 PIQDPLVLQETNSGISASSSKMVKELLSHGPLDKKVIQWMLTLHQIGLDVIRTDRTL-VFYEKQE--NLSKLWDILAVYA 207 (424)
Q Consensus 131 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qI~~Dv~RT~~~~-~~f~~~~--~~~~L~rIL~~~~ 207 (424)
.+..+||+.|+.||||.+ +.|..+. ++..|+|||.||+
T Consensus 194 ---------------------------------------~~~~~qI~~DL~RTfP~n~~~~~~~~~~~~~~LrRvL~Aya 234 (436)
T KOG2058|consen 194 ---------------------------------------SPVVKQIKLDLPRTFPDNFKGFDSEDSDGRQTLRRVLLAYA 234 (436)
T ss_pred ---------------------------------------chHHHHHHhccccccCCCcccCCCCCchHHHHHHHHHHHHH
Confidence 036789999999999999 7887764 4899999999999
Q ss_pred hhCCCCCCCCChhHHHHHHHhhccChhHHHHHHHHHHHHhhccccCCCChhhHHHHHHHHHHHHHhhCHHHHHHHHhCCC
Q 014458 208 WVDRDVGYCQGMSDLCSPMIILLENEADAFWCFERLMRRLRGNFRCTESSVGVETQLSNLASITQVIDPKLHQHLETLGG 287 (424)
Q Consensus 208 ~~~p~~gY~QGm~~i~a~ll~~~~~E~~af~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~dp~L~~hl~~~~i 287 (424)
.+||.+|||||||.+||++|+++++|++|||||..+++++.+.|+ ..++.|.+....+|+.+++..+|+|+.||...++
T Consensus 235 ~hNp~vGYCQGmNflAallLL~~~~EE~AFW~Lv~iie~~lp~Yy-t~nL~g~qvDQ~VL~~llre~lPkl~~~l~~~~~ 313 (436)
T KOG2058|consen 235 RHNPSVGYCQGMNFLAALLLLLMPSEEDAFWMLVALIENYLPRYY-TPNLIGSQVDQKVLRELLREKLPKLSLHLEGNGV 313 (436)
T ss_pred hhCCCCcchhhHHHHHHHHHHhcCChHHHHHHHHHHHHHhchhhc-CchhhhhhccHHHHHHHHHHHCHHHHHhhhhcCC
Confidence 999999999999999999999998899999999999999888854 6788999999999999999999999999999999
Q ss_pred CCcchhHHHHHHhcCcCCChhhHHHHHHHHHhccCCchHHHHHHHHHhhhccccccCcchhHHhhhhChhhhh
Q 014458 288 GDYLFAFRMLMVLFRREFSFCDSLYLWEMMWALEYDPHLFYLYEEAESAASTKSEGSKAKAKSIRQCGKYERE 360 (424)
Q Consensus 288 ~~~~f~~~W~ltlF~~~l~~~~v~riWD~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 360 (424)
+..+++++||+|+|+..+|.++++||||++|.+|...++-.+++.+... ++.++...+.....+.++.+...
T Consensus 314 ~~~l~t~~wfLt~f~d~lP~~t~LrIwD~~f~eGskvlfr~Alai~k~~-ee~il~~~~~~~i~~~~~~~~~~ 385 (436)
T KOG2058|consen 314 DASLETLPWFLTLFVDILPSETVLRIWDCLFYEGSKVLFRVALAILKKH-EEEILKEDSSKEILRVLPDLTKR 385 (436)
T ss_pred CeeeeehhhhHHHhcccccHHHHHHHHHHHHhcccHHHHHHHHHHHHHh-HHHHhcCCCHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999877776777777777 78888888888888887766544
No 3
>KOG1092 consensus Ypt/Rab-specific GTPase-activating protein GYP1 [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=1.1e-39 Score=309.96 Aligned_cols=252 Identities=27% Similarity=0.486 Sum_probs=222.4
Q ss_pred ccHHHHHHHHhhCCCCCCchhhhhhhhhCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhhhhccccCCCcccccccccCCC
Q 014458 50 LDIGKTLSRIHRGGIHPSIRGEVWEFLLGCYEPKSTFDEREEIRQRRRLQYSAWKEECHQIFPVVGSGKFITAPVVTEDG 129 (424)
Q Consensus 50 i~~~kll~~~~~~GIp~~~R~~vW~~LLg~~p~~~~~~~~~~~~~~~~~~Y~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (424)
+|.. ++|.++|+|||...|+.+|++|+|+.|.++ +.++...+.++..|.+++.++....... +.+
T Consensus 176 id~~-~Lr~l~w~Gvp~~~Rp~~Wkll~gylp~n~--~rr~~~l~~Kr~eY~~~v~~~~~~~~~~------------~~~ 240 (484)
T KOG1092|consen 176 IDLE-KLRKLCWNGVPSKMRPIVWKLLSGYLPPNS--DRREGTLQRKRKEYVDSVVQYFDSLTNG------------DED 240 (484)
T ss_pred ccHH-HHHHHccCCCCccccCccceeeecccCcch--hhhhhhHHHHHHHHHHHHHHHhccCCCc------------ccc
Confidence 4454 499999999999999999999999999987 6777889999999999999876332110 000
Q ss_pred CCCCCcccccccCCCCCCcchhHHHhhhcCCCchhHHHHHHHHHHHHhhhcCCCCCCcccccChhhHHHHHHHHHHHHhh
Q 014458 130 QPIQDPLVLQETNSGISASSSKMVKELLSHGPLDKKVIQWMLTLHQIGLDVIRTDRTLVFYEKQENLSKLWDILAVYAWV 209 (424)
Q Consensus 130 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qI~~Dv~RT~~~~~~f~~~~~~~~L~rIL~~~~~~ 209 (424)
.+..+||..|++|+.|...+|+.+..++.+.|||+.++.+
T Consensus 241 ----------------------------------------~d~~rQI~id~prm~p~~~l~q~~~vq~~lerIl~iwair 280 (484)
T KOG1092|consen 241 ----------------------------------------QDTWRQIPIDIPRMNPHIPLFQQKIVQEMLERILYIWAIR 280 (484)
T ss_pred ----------------------------------------CccccccccCCCCCCccccchhhHHHHHHHHHHHHHHHHh
Confidence 1256899999999999999999999999999999999999
Q ss_pred CCCCCCCCChhHHHHHHHhhcc-------------------------ChhHHHHHHHHHHHHhhccccCCCChhhHHHHH
Q 014458 210 DRDVGYCQGMSDLCSPMIILLE-------------------------NEADAFWCFERLMRRLRGNFRCTESSVGVETQL 264 (424)
Q Consensus 210 ~p~~gY~QGm~~i~a~ll~~~~-------------------------~E~~af~~~~~l~~~~~~~~~~~~~~~~~~~~~ 264 (424)
+|..||+||.++++.+++.++. -|+|||||+.+|++.+.++|.+.+ +|+++..
T Consensus 281 hpAsGyvqgindlvtpf~vvfl~e~l~~~~~~~~~d~~~l~~E~~~~iEADsyWClskLLD~IQDNYtfaQ--pGIq~kV 358 (484)
T KOG1092|consen 281 HPASGYVQGINDLVTPFFVVFLSEYLGPIMDVESIDMSLLPAENAEDIEADAYWCLSKLLDGIQDNYTFAQ--PGIQRKV 358 (484)
T ss_pred cccccccccceeeechhhhhhhHhhcCccccccccchhhccHHHHhhhhhhHHHHHHHHHHHhhhhhhhcC--hhHHHHH
Confidence 9999999999999999988762 289999999999999999998764 4999999
Q ss_pred HHHHHHHHhhCHHHHHHHHhCCCCCcchhHHHHHHhcCcCCChhhHHHHHHHHHhccCCchHHHHHHHHHhhhccccccC
Q 014458 265 SNLASITQVIDPKLHQHLETLGGGDYLFAFRMLMVLFRREFSFCDSLYLWEMMWALEYDPHLFYLYEEAESAASTKSEGS 344 (424)
Q Consensus 265 ~~~~~ll~~~dp~L~~hl~~~~i~~~~f~~~W~ltlF~~~l~~~~v~riWD~~l~~g~~~~~~~~~~~~~~~~~~~~~~~ 344 (424)
..++.+++..|+.|++||+++|++-..|++||+-|||.|+||+..++|+||.|++++.
T Consensus 359 ~~L~eLv~RID~~~hkHlq~~gveylQFAFRWmNcLLmRE~pl~~~iRlWDTY~aE~d---------------------- 416 (484)
T KOG1092|consen 359 KNLKELVQRIDEPLHKHLQEHGVEYLQFAFRWMNCLLMREFPLRCTIRLWDTYLAEPD---------------------- 416 (484)
T ss_pred HHHHHHHHHhcHHHHHHHHHhchHHHHHHHHHHHHHHHhhccchhHHHHHHHhhcCcc----------------------
Confidence 9999999999999999999999999999999999999999999999999999999743
Q ss_pred cchhHHhhhhChhhhhhhcCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhcCchhHHHHHhhh
Q 014458 345 KAKAKSIRQCGKYERENMKNGAKTSEAPLPISVFLVASVLKDKSSKLLQEARGLDDVVKVSLIS 408 (424)
Q Consensus 345 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ail~~~r~~il~~~~~~dd~~~~~~~~ 408 (424)
|-..|++|||||.|..-+++|+ +.+|.+++-++.+.
T Consensus 417 --------------------------gf~~FhvYvcAAFL~kW~~eL~--e~DFQ~~ilfLQnl 452 (484)
T KOG1092|consen 417 --------------------------GFNEFHVYVCAAFLLKWSSELM--ENDFQELILFLQNL 452 (484)
T ss_pred --------------------------chHHHHHHHHHHHHHHHHHHHH--HhHHHHHHHHHhcC
Confidence 4566999999999999999999 35999999887443
No 4
>smart00164 TBC Domain in Tre-2, BUB2p, and Cdc16p. Probable Rab-GAPs. Widespread domain present in Gyp6 and Gyp7, thereby giving rise to the notion that it performs a GTP-activator activity on Rab-like GTPases.
Probab=100.00 E-value=1.2e-39 Score=297.58 Aligned_cols=195 Identities=33% Similarity=0.612 Sum_probs=170.1
Q ss_pred hhCCCCCCchhhhhhhhhCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhhhhccccCCCcccccccccCCCCCCCCccccc
Q 014458 60 HRGGIHPSIRGEVWEFLLGCYEPKSTFDEREEIRQRRRLQYSAWKEECHQIFPVVGSGKFITAPVVTEDGQPIQDPLVLQ 139 (424)
Q Consensus 60 ~~~GIp~~~R~~vW~~LLg~~p~~~~~~~~~~~~~~~~~~Y~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (424)
+++|||+++|+.||+.++|+.+...+ ..+..|++++++....
T Consensus 1 ~~~Gip~~~R~~vW~~ll~~~~~~~~---------~~~~~Y~~l~~~~~~~----------------------------- 42 (199)
T smart00164 1 VRKGVPPSLRGVVWKLLLNAQPMDTS---------ADKDLYSRLLKETAPK----------------------------- 42 (199)
T ss_pred CCCCCCHHHHHHHHHHHhCCchhhhc---------ccchHHHHHHHhhcCC-----------------------------
Confidence 37899999999999999999765431 1355788887653210
Q ss_pred ccCCCCCCcchhHHHhhhcCCCchhHHHHHHHHHHHHhhhcCCCCCCcccccCh--hhHHHHHHHHHHHHhhCCCCCCCC
Q 014458 140 ETNSGISASSSKMVKELLSHGPLDKKVIQWMLTLHQIGLDVIRTDRTLVFYEKQ--ENLSKLWDILAVYAWVDRDVGYCQ 217 (424)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qI~~Dv~RT~~~~~~f~~~--~~~~~L~rIL~~~~~~~p~~gY~Q 217 (424)
+ ....++|++||.||++++++|+.+ .+++.|.|||.+|+.++|++||||
T Consensus 43 -----------------------~------~~~~~~I~~Dv~Rt~~~~~~f~~~~~~~~~~L~~IL~~~~~~~p~~gY~Q 93 (199)
T smart00164 43 -----------------------D------KSIVHQIEKDLRRTFPEHSFFQDKEGPGQESLRRVLKAYALYNPEVGYCQ 93 (199)
T ss_pred -----------------------C------hhhHHHHhcccCCCCCCchhhcCCCcccHHHHHHHHHHHHHHCCCCceec
Confidence 0 013579999999999999999864 589999999999999999999999
Q ss_pred ChhHHHHHHHhhccChhHHHHHHHHHHHHhhccccCCCChhhHHHHHHHHHHHHHhhCHHHHHHHHh-CCCCCcchhHHH
Q 014458 218 GMSDLCSPMIILLENEADAFWCFERLMRRLRGNFRCTESSVGVETQLSNLASITQVIDPKLHQHLET-LGGGDYLFAFRM 296 (424)
Q Consensus 218 Gm~~i~a~ll~~~~~E~~af~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~dp~L~~hl~~-~~i~~~~f~~~W 296 (424)
||++||++++.++.+|++|||+|+++|++....|+ .+++.++...+..+..+++..+|+||+||++ .|+++.+|+.+|
T Consensus 94 Gm~~i~~~ll~~~~~e~~af~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~ll~~~~p~l~~~l~~~~~i~~~~~~~~W 172 (199)
T smart00164 94 GMNFLAAPLLLVMPDEEDAFWCLVKLMERYGPNFY-LPDMSGLQLDLLQLDRLVKEYDPDLYKHLKDKLGIDPSLYALRW 172 (199)
T ss_pred cHHHHHHHHHHhcCCHHHHHHHHHHHHHHhCcccC-CCChHHHHHHHHHHHHHHHHHCHHHHHHHHHhcCCCchhHHHHH
Confidence 99999999999998899999999999999877664 5566789999999999999999999999996 999999999999
Q ss_pred HHHhcCcCCChhhHHHHHHHHHhccC
Q 014458 297 LMVLFRREFSFCDSLYLWEMMWALEY 322 (424)
Q Consensus 297 ~ltlF~~~l~~~~v~riWD~~l~~g~ 322 (424)
++|+|++++|++.++||||.++++|.
T Consensus 173 ~~~lF~~~~~~~~~~riwD~~l~eG~ 198 (199)
T smart00164 173 FLTLFARELPLEIVLRIWDVLFAEGS 198 (199)
T ss_pred HHHHHHhhCCHHHHHHHHHHHHhcCC
Confidence 99999999999999999999999874
No 5
>KOG2197 consensus Ypt/Rab-specific GTPase-activating protein GYP7 and related proteins [Signal transduction mechanisms]
Probab=100.00 E-value=9.5e-37 Score=308.54 Aligned_cols=381 Identities=41% Similarity=0.689 Sum_probs=291.2
Q ss_pred ccccCcccccCCCCCCCCCCCCCCcHHHHHHhcCCCCCcc-HHHHHHHHhhCCCCCCchhhhhhhhhCCCCCCCCHHHHH
Q 014458 12 YYEVRPECTDVPKTRFKIKPGKTLSARKWQAAFTPEGQLD-IGKTLSRIHRGGIHPSIRGEVWEFLLGCYEPKSTFDERE 90 (424)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~W~~~~~~~~~i~-~~kll~~~~~~GIp~~~R~~vW~~LLg~~p~~~~~~~~~ 90 (424)
++-..+.|...+.....+++..+++.++|.+.|.+++... ..++++.+..+||+|.+|+.||.+|+|+|+.+++.+++.
T Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~f~~~~~~~~~~~~l~~i~~~gi~psir~evw~fll~~y~~~~~~~~~~ 104 (488)
T KOG2197|consen 25 VVDSREPCLSQSRIWVLIKPGKTLKPEKWQANFDPDGRLSGFVKLLKLIILGGIDPSIRGEVWEFLLGCYDLDSTFEERN 104 (488)
T ss_pred cccccccccccCCcceeeccccccchhhhhhccCCCccccchhhhheeeecCCCCCcccchhHHHHhcccCCCCchHHHH
Confidence 5556678888888899999999999999999999998875 788899999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhhhccccCCC-cccccccccCCCCCC-----CCcccccccCCC--------------------
Q 014458 91 EIRQRRRLQYSAWKEECHQIFPVVGSG-KFITAPVVTEDGQPI-----QDPLVLQETNSG-------------------- 144 (424)
Q Consensus 91 ~~~~~~~~~Y~~l~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~-----~~~~~~~~~~~~-------------------- 144 (424)
.++..++.+|..|..+|..+.+.++.+ .........+.+.|. .+.....+.+..
T Consensus 105 ~~r~~~~~~~~~l~~~c~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~l~~ 184 (488)
T KOG2197|consen 105 QLRVARRPQYNELLLVCQMMKSTVGNGLSYVVSSVVSDNRSPSLTLEEYNSNAMREGRLDESVHQRERIFSGGLSKSLRA 184 (488)
T ss_pred HHHhhcccchHHHHHHcchhhhhhccccceeeeEEeecCCCCcchhhhhhhhhhhccccccchhhhheecccccccchhh
Confidence 999999999999999999999888776 444444444444442 111111110000
Q ss_pred -----------CCCcch--------------hHHHhhhcCCCchhHHHHHHHHHHHHhhhcCCCCCCcccccChhh--HH
Q 014458 145 -----------ISASSS--------------KMVKELLSHGPLDKKVIQWMLTLHQIGLDVIRTDRTLVFYEKQEN--LS 197 (424)
Q Consensus 145 -----------~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~qI~~Dv~RT~~~~~~f~~~~~--~~ 197 (424)
+..... ....|.......+.....+......|.+||.||.+.+.++....+ ..
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~qW~~~~~~~~~~~~~~~~~~~~i~~dv~rtDr~~~~~~~~~n~~~~ 264 (488)
T KOG2197|consen 185 EVWKFLLDYSPWDSTTRERVSLRKLTDEYFRLKLQWSSTSPEQSPESEGYLERKSRIEKDVGRTDRSLEFYEGEENPHLA 264 (488)
T ss_pred hhhhhhhcccCcccccccccccccccccHhhhhhhheeccccccccccchhhhhhhhhhhccccchhhhhhhcccccCHH
Confidence 000000 000000000000000001223446789999999999999998877 99
Q ss_pred HHHHHHHHHHhhCCCCCCCCChhHHHHHHHhhccChhHHHHHHHHHHHHhhccccCCCChhhHHHHHHHHHHHHHhhCHH
Q 014458 198 KLWDILAVYAWVDRDVGYCQGMSDLCSPMIILLENEADAFWCFERLMRRLRGNFRCTESSVGVETQLSNLASITQVIDPK 277 (424)
Q Consensus 198 ~L~rIL~~~~~~~p~~gY~QGm~~i~a~ll~~~~~E~~af~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~dp~ 277 (424)
.|.+||.+|+.+++++||||||++++++++.++.+|.+|||||+.+|++...+|..+.. ++..++..+..+++..||.
T Consensus 265 ~l~~iL~ty~~~~~d~GY~QgmSDllspi~~v~~de~~aFwcFv~fm~~~~~nF~~d~~--~~~~Ql~~~~~li~~~dp~ 342 (488)
T KOG2197|consen 265 RLVDILLTYAVYDFDLGYCQGMSDLLSPILIVMEDEVEAFWCFVGFMDRLRHNFRIDQS--GMQTQLAQLSSLIQELDPR 342 (488)
T ss_pred HHHHHHhhcccccCccccccCchhhcCcceeeecCchHHHHHHHHHHHHHhhcCccccc--cHHHHhhhhhhhccccCHH
Confidence 99999999999999999999999999999999999999999999999999989977655 9999999999999999999
Q ss_pred HHHHHHhCCCCCcchhHHHHHHhcCcCCChhhHHHHHHHHHhccCCchHHHHHHHHHhhhccccccCcchhHHhhhhChh
Q 014458 278 LHQHLETLGGGDYLFAFRMLMVLFRREFSFCDSLYLWEMMWALEYDPHLFYLYEEAESAASTKSEGSKAKAKSIRQCGKY 357 (424)
Q Consensus 278 L~~hl~~~~i~~~~f~~~W~ltlF~~~l~~~~v~riWD~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 357 (424)
||+||++.+.....|+++|++.+|.++|.+++++++|+.+++.-+.+ .|+++......++ ..+.+...++.
T Consensus 343 l~~hLe~~d~~~~~f~fr~l~v~frrEf~~ed~l~LWEvlw~~~~~~-~f~~~~~~~~l~~--------~~~~l~~~~~~ 413 (488)
T KOG2197|consen 343 LYQHLEKLDAGDLFFCFRMLLVPFRREFEFEDSLRLWEVLWTDLPSP-HFHLYVAPAILNK--------DPQTLMEQGKS 413 (488)
T ss_pred HHhhccccCCCccceeeehhhcccccccccccHHHHHHHHHhcCccc-hHHHHHHHhhhhc--------chHHHHhcCcc
Confidence 99999999999999999999999999999999999999999987766 3433333333312 23333433333
Q ss_pred hhhhhcCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhcCchhHHH
Q 014458 358 ERENMKNGAKTSEAPLPISVFLVASVLKDKSSKLLQEARGLDDVVK 403 (424)
Q Consensus 358 ~~~~~~~~~~~~~~~~~~~~~~~~ail~~~r~~il~~~~~~dd~~~ 403 (424)
....++.............++.+|..+.....++.....+++++..
T Consensus 414 ~~e~l~~i~~~~~~~d~~~~~~~A~~~~~~~k~~~~~~~~~~~~~~ 459 (488)
T KOG2197|consen 414 FNEVLKHVNLLSEKADVLWVLVRAEALERQNKQMEEPPEVMDEIES 459 (488)
T ss_pred chhHHhhcccccccchhhhHHHHHHHHHHHHHhccccccchhhhhh
Confidence 3333333444456777788888888888888888877777776654
No 6
>KOG2224 consensus Uncharacterized conserved protein, contains TBC domain [Signal transduction mechanisms; General function prediction only]
Probab=100.00 E-value=4.1e-35 Score=278.51 Aligned_cols=286 Identities=29% Similarity=0.541 Sum_probs=224.1
Q ss_pred CCCCCCCCCCCC--CCcHHHHHH-hcCCCCCc-cHHHHHHHHhhCCCCCCchhhhhhhhhCCCCCCCCHHHHHHHHHHHH
Q 014458 22 VPKTRFKIKPGK--TLSARKWQA-AFTPEGQL-DIGKTLSRIHRGGIHPSIRGEVWEFLLGCYEPKSTFDEREEIRQRRR 97 (424)
Q Consensus 22 ~~~~~~~~~~~~--~l~~~~W~~-~~~~~~~i-~~~kll~~~~~~GIp~~~R~~vW~~LLg~~p~~~~~~~~~~~~~~~~ 97 (424)
.|+.+-.++.+. ++.-..|.. .+++.|.+ +.-++++.++.|||..++|++||++||.+|...+|.++|..++..+|
T Consensus 390 l~~se~hpde~~~kki~~n~~~~t~lne~gqiedd~~lrk~iffggid~sir~evwpfllk~ys~est~edr~al~~~kr 469 (781)
T KOG2224|consen 390 LKKSEMHPDEGDVKKIGTNAFLGTHLNEKGQIEDDLKLRKAIFFGGIDKSIRGEVWPFLLKCYSFESTFEDRAALMDIKR 469 (781)
T ss_pred CCccccCCccchhhhhhHHHHHHhhhhhcccchhHHHhhhhheeccchhhhhcchhHHHHHHhccccchhHHHHHHHHHH
Confidence 343444444333 455567776 67777888 55577789999999999999999999999999999999999999999
Q ss_pred HHHHHHHHH-hhhhccccCCCcccccccccCCCCCCCCcccccccCCCCCCcchhHHHhhhcCCCchhHHHHHHHHHHHH
Q 014458 98 LQYSAWKEE-CHQIFPVVGSGKFITAPVVTEDGQPIQDPLVLQETNSGISASSSKMVKELLSHGPLDKKVIQWMLTLHQI 176 (424)
Q Consensus 98 ~~Y~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qI 176 (424)
++|+++..+ +-++. +++...-|+-+.-.+
T Consensus 470 key~eiqqkrlysms--------------------------------------------------peeh~~fwknvq~tv 499 (781)
T KOG2224|consen 470 KEYEEIQQKRLYSMS--------------------------------------------------PEEHIAFWKNVQFTV 499 (781)
T ss_pred HHHHHHHHHHhhcCC--------------------------------------------------HHHHHHHHhheEEEE
Confidence 999988654 21221 122222343344568
Q ss_pred hhhcCCCCCCcccccCh--hhHHHHHHHHHHHHhhCCCCCCCCChhHHHHHHHhhccChhHHHHHHHHHHHHhh------
Q 014458 177 GLDVIRTDRTLVFYEKQ--ENLSKLWDILAVYAWVDRDVGYCQGMSDLCSPMIILLENEADAFWCFERLMRRLR------ 248 (424)
Q Consensus 177 ~~Dv~RT~~~~~~f~~~--~~~~~L~rIL~~~~~~~p~~gY~QGm~~i~a~ll~~~~~E~~af~~~~~l~~~~~------ 248 (424)
++||.||.+++++|.++ ++-+.++|||..|+.|||.+||.|||+++.|+.|.-..+|.++||||+.||+.+.
T Consensus 500 dkdvvrtdrnn~ff~gddnpn~e~mk~illn~avyn~~m~ysqgmsdllapvlcevqnesetfwcfvglmqgmsdlvapi 579 (781)
T KOG2224|consen 500 DKDVVRTDRNNPFFCGDDNPNTESMKNILLNFAVYNPAMGYSQGMSDLLAPVLCEVQNESETFWCFVGLMQGMSDLVAPI 579 (781)
T ss_pred ecceeeccCCCCcccCCCCCcHHHHHHHHHhheeecccccccccchhhcchhhhhhccccchhhhhhhhhccchhhhhhH
Confidence 99999999999999986 6789999999999999999999998888888888777777777777777776321
Q ss_pred --------------------ccccCCCChhhHHHHHHHHHHHHHhhCHHHHHHHHhCCCCC--cchhHHHHHHhcCcCCC
Q 014458 249 --------------------GNFRCTESSVGVETQLSNLASITQVIDPKLHQHLETLGGGD--YLFAFRMLMVLFRREFS 306 (424)
Q Consensus 249 --------------------~~~~~~~~~~~~~~~~~~~~~ll~~~dp~L~~hl~~~~i~~--~~f~~~W~ltlF~~~l~ 306 (424)
..|...+....+...+..+..+++...|..|+||.+.|-+. .+||.||++.+|.++||
T Consensus 580 laevldesdtfwcfvglmqna~fv~sp~d~dmd~~l~ylreliri~~~~fykhl~q~~ed~lellfchrwlllcfkref~ 659 (781)
T KOG2224|consen 580 LAEVLDESDTFWCFVGLMQNAFFVCSPRDEDMDHNLLYLRELIRIMHPHFYKHLEQHGEDGLELLFCHRWLLLCFKREFP 659 (781)
T ss_pred HHhhhccccchhhhhhhhcceEEEeCCcchhhhHhHHHHHHHHHHhhHHHHHHHHHhCcchhhHHHHHHHHHHHhhhccc
Confidence 23444555668888999999999999999999999987543 37999999999999999
Q ss_pred hhhHHHHHHHHHhcc--CCchHHHHHHHHHhhhccccccCcchhHHhhhhChh
Q 014458 307 FCDSLYLWEMMWALE--YDPHLFYLYEEAESAASTKSEGSKAKAKSIRQCGKY 357 (424)
Q Consensus 307 ~~~v~riWD~~l~~g--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 357 (424)
...++|||+..|+.- .-+.+|+++|++.+.|.+.+...-.+.+.+.+|+++
T Consensus 660 ea~airiweacwa~y~tdyfhlficlaiiaiy~ddvi~q~l~~demllhf~nl 712 (781)
T KOG2224|consen 660 EAEAIRIWEACWAHYLTDYFHLFICLAIIAIYADDVIAQNLAPDEMLLHFGNL 712 (781)
T ss_pred HHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhhhHHHHhhcCchhHHHhhhhh
Confidence 999999999999842 223556666666666666676666778888899884
No 7
>KOG2223 consensus Uncharacterized conserved protein, contains TBC domain [Signal transduction mechanisms; General function prediction only]
Probab=100.00 E-value=1.7e-34 Score=274.70 Aligned_cols=212 Identities=23% Similarity=0.371 Sum_probs=170.0
Q ss_pred HHHHHHhhCCCCCCchhhhhhhhhCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhhhhccccCCCcccccccccCCCCCCC
Q 014458 54 KTLSRIHRGGIHPSIRGEVWEFLLGCYEPKSTFDEREEIRQRRRLQYSAWKEECHQIFPVVGSGKFITAPVVTEDGQPIQ 133 (424)
Q Consensus 54 kll~~~~~~GIp~~~R~~vW~~LLg~~p~~~~~~~~~~~~~~~~~~Y~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 (424)
+-++.++|.|||+.+|++||.+..|. -.+.+ .+.|.....+.++-...
T Consensus 292 rR~relWwQGiP~~VRGkvW~laIGN-el~it-----------~elfd~~la~Aker~ak-------------------- 339 (586)
T KOG2223|consen 292 RRVRELWWQGIPPSVRGKVWSLAIGN-ELNIT-----------YELFDIALARAKEREAK-------------------- 339 (586)
T ss_pred HHHHHHHHccCChhhcchhhHhhhCc-ccccC-----------HHHHHHHHHHHHHHHHH--------------------
Confidence 34889999999999999999999996 33333 33444444332211000
Q ss_pred CcccccccCCCCCCcchhHHHhhhcCCCchhHHHHHHHHHHHHhhhcCCCCCCcccccCh-hhHHHHHHHHHHHHhhCCC
Q 014458 134 DPLVLQETNSGISASSSKMVKELLSHGPLDKKVIQWMLTLHQIGLDVIRTDRTLVFYEKQ-ENLSKLWDILAVYAWVDRD 212 (424)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qI~~Dv~RT~~~~~~f~~~-~~~~~L~rIL~~~~~~~p~ 212 (424)
.++++.+ +...+..+...+|..|+.||||++.+|+.+ +..+.|..+|.||++|.|+
T Consensus 340 ---~~aeq~~--------------------~sa~~re~sv~~i~LDisrTfpsl~iFqk~GPy~d~L~~lL~AYt~yRpD 396 (586)
T KOG2223|consen 340 ---SLAEQMS--------------------NSAADREASVELIKLDISRTFPSLSIFQKGGPYHDDLHSLLGAYTCYRPD 396 (586)
T ss_pred ---HHHhhcc--------------------cchhhhhcchhheeechhccCcceeeeccCCchHHHHHHHhhhheeecCc
Confidence 0000000 012223356789999999999999999886 7899999999999999999
Q ss_pred CCCCCChhHHHHHHHhhccChhHHHHHHHHHHHHh--hccccCCCChhhHHHHHHHHHHHHHhhCHHHHHHHHhCCCCCc
Q 014458 213 VGYCQGMSDLCSPMIILLENEADAFWCFERLMRRL--RGNFRCTESSVGVETQLSNLASITQVIDPKLHQHLETLGGGDY 290 (424)
Q Consensus 213 ~gY~QGm~~i~a~ll~~~~~E~~af~~~~~l~~~~--~~~~~~~~~~~~~~~~~~~~~~ll~~~dp~L~~hl~~~~i~~~ 290 (424)
+||+|||.+|+|+|++.+ ++++||.+|.+|+++- ...|..+ ...+..++..|+..+++..|+|+.||.++++.|.
T Consensus 397 vgYVqgmSFIaAvLllnm-d~~~AFiafANLLdkp~q~Aff~~d--~s~m~~yf~tfe~~leenlp~L~~Hl~kl~l~PD 473 (586)
T KOG2223|consen 397 VGYVQGMSFIAAVLLLNM-DLADAFIAFANLLDKPCQQAFFRVD--HSSMLSYFATFEVFLEENLPKLFTHLKKLELTPD 473 (586)
T ss_pred cccccchHHHHHHHHHcC-CcHHHHHHHHHHhccHHHHHHHhcC--cHHHHHHHHHHHHHHHhccHHHHHHHHhccCCCc
Confidence 999999999999999888 8999999999999983 2344333 3478899999999999999999999999999999
Q ss_pred chhHHHHHHhcCcCCChhhHHHHHHHHHhccCC
Q 014458 291 LFAFRMLMVLFRREFSFCDSLYLWEMMWALEYD 323 (424)
Q Consensus 291 ~f~~~W~ltlF~~~l~~~~v~riWD~~l~~g~~ 323 (424)
+|.+.|+.++|+..+|++.++||||+|+-+|..
T Consensus 474 iylidwiftlyskslpldlacRIwDvy~rdgee 506 (586)
T KOG2223|consen 474 IYLIDWIFTLYSKSLPLDLACRIWDVYCRDGEE 506 (586)
T ss_pred hhhHHHHHHHHhccCChHHhhhhhheeeecchH
Confidence 999999999999999999999999999987654
No 8
>COG5210 GTPase-activating protein [General function prediction only]
Probab=100.00 E-value=6.4e-34 Score=293.32 Aligned_cols=251 Identities=26% Similarity=0.442 Sum_probs=201.9
Q ss_pred CcHHHHHHhcCCCCC-c---cHHHHHHHHhhCCCCCCchhhhhhhhhCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhhhh
Q 014458 35 LSARKWQAAFTPEGQ-L---DIGKTLSRIHRGGIHPSIRGEVWEFLLGCYEPKSTFDEREEIRQRRRLQYSAWKEECHQI 110 (424)
Q Consensus 35 l~~~~W~~~~~~~~~-i---~~~kll~~~~~~GIp~~~R~~vW~~LLg~~p~~~~~~~~~~~~~~~~~~Y~~l~~~~~~~ 110 (424)
.....|.+.+...+. . ...+ ++.+.+.|||+.+|+.||..++|..+.... ....|+.+.+.....
T Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~gip~~~r~~vw~~~~~~~~~~~~----------~~~~y~~~~~~~~~~ 249 (496)
T COG5210 181 AADKLWISYLDPNPLSFLPVQLSK-LRELIRKGIPNELRGDVWEFLLGIGFDLDK----------NPGLYERLLNLHREA 249 (496)
T ss_pred HHHHHHHHHHhcccchhhhhhHHH-HHHHHHhcCChHhhhhhHHHHhccchhhcc----------CchHHHHHHHHHHhc
Confidence 345568888877655 2 3344 677888899999999999999999776542 333455555533211
Q ss_pred ccccCCCcccccccccCCCCCCCCcccccccCCCCCCcchhHHHhhhcCCCchhHHHHHHHHHHHHhhhcCCCCCCcccc
Q 014458 111 FPVVGSGKFITAPVVTEDGQPIQDPLVLQETNSGISASSSKMVKELLSHGPLDKKVIQWMLTLHQIGLDVIRTDRTLVFY 190 (424)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qI~~Dv~RT~~~~~~f 190 (424)
.. + . ....++|++||.||++.+..|
T Consensus 250 ~~------------------~-------------------------------~------~~~~~~i~~Dl~rt~~~~~~f 274 (496)
T COG5210 250 KI------------------P-------------------------------T------QEIISQIEKDLSRTFPDNSLF 274 (496)
T ss_pred CC------------------C-------------------------------c------HHHHHHHHccccccccccccc
Confidence 00 0 0 025789999999999999999
Q ss_pred cChhhHHH--HHHHHHHHHhhCCCCCCCCChhHHHHHHHhhccChhHHHHHHHHHHHH--hhccccCCCChhhHHHHHHH
Q 014458 191 EKQENLSK--LWDILAVYAWVDRDVGYCQGMSDLCSPMIILLENEADAFWCFERLMRR--LRGNFRCTESSVGVETQLSN 266 (424)
Q Consensus 191 ~~~~~~~~--L~rIL~~~~~~~p~~gY~QGm~~i~a~ll~~~~~E~~af~~~~~l~~~--~~~~~~~~~~~~~~~~~~~~ 266 (424)
+.+..... |.|||.+|+.+||++||||||++++|+|+.++..|++||||+++||+. +...|. .++.|+...+..
T Consensus 275 ~~~~s~~~~~L~rvL~ays~~~p~vgY~QgMn~l~a~ll~~~~~Ee~AF~~l~~L~~~~~l~~~~~--~~~~G~~~~~~~ 352 (496)
T COG5210 275 QTEISIRAENLRRVLKAYSLYNPEVGYVQGMNFLAAPLLLVLESEEQAFWCLVKLLKNYGLPGYFL--KNLSGLHRDLKV 352 (496)
T ss_pred cCcccccHHHHHHHHHHHHhcCCCCceeccHHHHHHHHHHHhhhhHHHHHHHHHHHHhccchhhcc--cCCcHHHHHHHH
Confidence 98866665 999999999999999999999999999999997799999999999993 445554 356699999999
Q ss_pred HHHHHHhhCHHHHHHHHhCCCCCcchhHHHHHHhcCcCCChhhHHHHHHHHHhccCCchHHHHHHHHHhhhccccccCcc
Q 014458 267 LASITQVIDPKLHQHLETLGGGDYLFAFRMLMVLFRREFSFCDSLYLWEMMWALEYDPHLFYLYEEAESAASTKSEGSKA 346 (424)
Q Consensus 267 ~~~ll~~~dp~L~~hl~~~~i~~~~f~~~W~ltlF~~~l~~~~v~riWD~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 346 (424)
+..+++..+|+||+||...++...+|+++||+|+|.+++|.+.++||||++|.+|.....-+.++.+... +..+.....
T Consensus 353 l~~~v~~~~p~l~~hl~~~~~~~~~~~~~w~l~lF~~~~p~e~~lriwD~lf~eg~~~l~~~~~~~l~~~-~~~l~~~~~ 431 (496)
T COG5210 353 LDDLVEELDPELYEHLLREGVVLLMFAFRWFLTLFVREFPLEYALRIWDCLFLEGSSMLFQLALAILKLL-RDKLLKLDS 431 (496)
T ss_pred HHHHHHHHHHHHHHHHHHcCCchhhhhHHHHHHHHHhcCCHHHHHHHHHHHHHhccHHHHHHHHHHHHhh-hhhhhccCc
Confidence 9999999999999999999999999999999999999999999999999999999888777777777776 666555555
Q ss_pred hhHHhhhh
Q 014458 347 KAKSIRQC 354 (424)
Q Consensus 347 ~~~~~~~~ 354 (424)
+.....-+
T Consensus 432 ~~~~~~~~ 439 (496)
T COG5210 432 DELLDLLL 439 (496)
T ss_pred hhHHHHHH
Confidence 54444433
No 9
>PF00566 RabGAP-TBC: Rab-GTPase-TBC domain; InterPro: IPR000195 Identification of a TBC domain in GYP6_YEAST and GYP7_YEAST, which are GTPase activator proteins of yeast Ypt6 and Ypt7, imply that these domains are GTPase activator proteins of Rab-like small GTPases [].; GO: 0005097 Rab GTPase activator activity, 0032313 regulation of Rab GTPase activity, 0005622 intracellular; PDB: 2G77_A 1FKM_A 3HZJ_A 3QYE_A 2QFZ_A 3QYB_A 2QQ8_A 3DZX_A 3QWL_A.
Probab=100.00 E-value=8e-33 Score=255.00 Aligned_cols=147 Identities=34% Similarity=0.645 Sum_probs=130.4
Q ss_pred HHHHHhhhcCCCCCCcccccChhhHHHHHHHHHHHHhhCCCCCCCCChhHHHHHHHhhccChhHHHHHHHHHHH-Hhhcc
Q 014458 172 TLHQIGLDVIRTDRTLVFYEKQENLSKLWDILAVYAWVDRDVGYCQGMSDLCSPMIILLENEADAFWCFERLMR-RLRGN 250 (424)
Q Consensus 172 ~~~qI~~Dv~RT~~~~~~f~~~~~~~~L~rIL~~~~~~~p~~gY~QGm~~i~a~ll~~~~~E~~af~~~~~l~~-~~~~~ 250 (424)
..++|++|+.||+++...+..+.+++.|.|||.+|+.++|++||+|||++|+++++.++.+|++|||||+++++ .....
T Consensus 46 ~~~~I~~Dv~rt~~~~~~~~~~~~~~~l~~iL~~~~~~~~~~~Y~qG~~~i~~~ll~~~~~e~~af~~~~~l~~~~~~~~ 125 (214)
T PF00566_consen 46 IFEQIDKDVNRTFPNSFLFKNEQNQKSLERILSAYAKYNPDVGYCQGMNDIAAPLLLVFLDEEEAFWCFVQLLNYYLPDF 125 (214)
T ss_dssp CHHHHHHHHCTSSTSCCCSTTHHHHHHHHHHHHHHHHHTTTTSS-TTHHHHHHHHHHTCSHHHHHHHHHHHHHTHHGGGG
T ss_pred HHHHHHHhhhhhcccchhhhhcchHHHHHHHHHHhccccccccccchhhhhhhhhhhhcccccchhccccchhccccccc
Confidence 36799999999999778888889999999999999999999999999999999999888899999999999994 34444
Q ss_pred ccCCCChhhHHHHHHHHHHHHHhhCHHHHHHHHhCCCCCcchhHHHHHHhcCcCCChhhHHHHHHHHHhcc
Q 014458 251 FRCTESSVGVETQLSNLASITQVIDPKLHQHLETLGGGDYLFAFRMLMVLFRREFSFCDSLYLWEMMWALE 321 (424)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~ll~~~dp~L~~hl~~~~i~~~~f~~~W~ltlF~~~l~~~~v~riWD~~l~~g 321 (424)
|. .+..++...+..+..+++.++|+|++||++.|+++..|+.+|+.|+|++++|.+.++|||| ++.+|
T Consensus 126 ~~--~~~~~~~~~~~~~~~ll~~~~P~l~~~l~~~~~~~~~~~~~w~~~lF~~~l~~~~~~~lwD-~l~~g 193 (214)
T PF00566_consen 126 FQ--PNFKGLQKILKIFEQLLKKHDPELYNHLKQLGVDPEIYAFPWFLTLFSRSLPFDDVLRLWD-FLLEG 193 (214)
T ss_dssp TS--TTHHHHHHHHHHHHHHHHHHTHHHHHHHHHTT-GGHHHHHHHHHTTTTTTS-HHHHHHHHH-HHHHC
T ss_pred cc--ccccccchhhhhHHHHHHhhhhhhhhhhhhhhhhhhhhhhhhhHhhcCCcCCHHHHHHHHH-HHHcC
Confidence 43 3455799999999999999999999999999999999999999999999999999999999 66554
No 10
>KOG1093 consensus Predicted protein kinase (contains TBC and RHOD domains) [General function prediction only]
Probab=99.97 E-value=3.7e-30 Score=252.86 Aligned_cols=181 Identities=22% Similarity=0.318 Sum_probs=168.1
Q ss_pred HHHHHhhhcCCCCCCcccccChhhHHHHHHHHHHHHhhCCCCCCCCChhHHHHHHHhhc-cChhHHHHHHHHHHHHhhcc
Q 014458 172 TLHQIGLDVIRTDRTLVFYEKQENLSKLWDILAVYAWVDRDVGYCQGMSDLCSPMIILL-ENEADAFWCFERLMRRLRGN 250 (424)
Q Consensus 172 ~~~qI~~Dv~RT~~~~~~f~~~~~~~~L~rIL~~~~~~~p~~gY~QGm~~i~a~ll~~~-~~E~~af~~~~~l~~~~~~~ 250 (424)
+.+||+.|++|+.......+...++++|+|+|.+|+..+|...|.||+..+|+||++.. ++|.-||.|+..|+-++..+
T Consensus 390 tdrqievdiprchQyd~~lsSp~~~r~lrRvLkawv~~s~~fvywqgldsLa~PFl~ln~Nne~laF~~~~~fi~kycq~ 469 (725)
T KOG1093|consen 390 TDRQIEVDIPRCHQYDELLSSPKGHRKLRRVLKAWVTWSPIFVYWQGLDSLAAPFLYLNFNNELLAFACIATFIPKYCQH 469 (725)
T ss_pred chhhhhcccchhhhcccccCCHHHHHHHHHHHHHHHhcCcceeecCCChhhhhhHHHHhcCchHHHHHHHHHHHHHHHHH
Confidence 45799999999999999999999999999999999999999999999999999999875 68999999999999998777
Q ss_pred ccCCCChhhHHHHHHHHHHHHHhhCHHHHHHHHhCCCCCcchhHHHHHHhcCcCCChhhHHHHHHHHHhccCCchHHHHH
Q 014458 251 FRCTESSVGVETQLSNLASITQVIDPKLHQHLETLGGGDYLFAFRMLMVLFRREFSFCDSLYLWEMMWALEYDPHLFYLY 330 (424)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~ll~~~dp~L~~hl~~~~i~~~~f~~~W~ltlF~~~l~~~~v~riWD~~l~~g~~~~~~~~~ 330 (424)
|+..++..-++.++..|.+++..+||+|++||..+|+.+.+||.+||+|+|+++||.+..+.+||.++..
T Consensus 470 fflkdns~vikeyLs~f~~l~AfhDpeL~qHl~~~~f~~eLyAiPwflT~Fshvlpl~kil~LwD~lml~---------- 539 (725)
T KOG1093|consen 470 FFLKDNSNVIKEYLSMFSQLLAFHDPELLQHLIDIGFIPELYAIPWFLTMFSHVLPLHKILHLWDNLMLG---------- 539 (725)
T ss_pred HHhhcCchhHHHHHHHHHHHHHhcCHHHHHHHHHcCCcHHHHHHHHHHHHHHhhccHHHHHHHHHHHhcC----------
Confidence 7666666788999999999999999999999999999999999999999999999999999999999983
Q ss_pred HHHHhhhccccccCcchhHHhhhhChhhhhhhcCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhcCchhHHHHH
Q 014458 331 EEAESAASTKSEGSKAKAKSIRQCGKYERENMKNGAKTSEAPLPISVFLVASVLKDKSSKLLQEARGLDDVVKVS 405 (424)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ail~~~r~~il~~~~~~dd~~~~~ 405 (424)
+..|++++++||+...|+.+|++ +|+|++.+|
T Consensus 540 -----------------------------------------~~SFplmi~vAil~~lR~~LLa~--nfne~illf 571 (725)
T KOG1093|consen 540 -----------------------------------------HSSFPLMIGVAILIQLRDPLLAC--NFNECILLF 571 (725)
T ss_pred -----------------------------------------CCccHHHHHHHHHHHhhhhhhhC--Cchhheeee
Confidence 66699999999999999999966 899988765
No 11
>KOG1091 consensus Ypt/Rab-specific GTPase-activating protein GYP6 [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.96 E-value=1.3e-28 Score=242.14 Aligned_cols=223 Identities=26% Similarity=0.368 Sum_probs=166.4
Q ss_pred CCchhhhhhhhhCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhhhhccccCCCcccccccccCC----CCCCCCccccccc
Q 014458 66 PSIRGEVWEFLLGCYEPKSTFDEREEIRQRRRLQYSAWKEECHQIFPVVGSGKFITAPVVTED----GQPIQDPLVLQET 141 (424)
Q Consensus 66 ~~~R~~vW~~LLg~~p~~~~~~~~~~~~~~~~~~Y~~l~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~ 141 (424)
...|+.+|+++||++|.+.+ .|..-..+.+..|..+...+ ...|+...+ ..++++|+..+
T Consensus 27 s~~Rgv~Wrl~L~vLp~~~s--s~id~~~~~ra~~r~~r~~~------------L~dPh~~k~~~s~d~~idnPLSq~-- 90 (625)
T KOG1091|consen 27 SNLRGVRWRLLLGVLPSENS--SWIDNLRRLRANYRRLRRRL------------LIDPHNLKENHSPDLPIDNPLSQN-- 90 (625)
T ss_pred hhhhhHHHHHhheecCCCch--hHHHHHHHHhhhhhcccccc------------ccCccccccccCCCcccCCccccC--
Confidence 45899999999999999864 34444555566666653221 111111111 22333344222
Q ss_pred CCCCCCcchhHHHhhhcCCCchhHHHHHHHHHHHHhhhcCCCCCCc-ccccChhhHHHHHHHHHHHHhhCCCCCCCCChh
Q 014458 142 NSGISASSSKMVKELLSHGPLDKKVIQWMLTLHQIGLDVIRTDRTL-VFYEKQENLSKLWDILAVYAWVDRDVGYCQGMS 220 (424)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qI~~Dv~RT~~~~-~~f~~~~~~~~L~rIL~~~~~~~p~~gY~QGm~ 220 (424)
..+.|.+.++..+..+.|+.|+.||||++ .+|+.+..+..|+|||..|+..||.+||-||||
T Consensus 91 -----------------~~S~W~rfF~d~EL~~~i~qDvsRtfPe~~~fFqs~~~q~mLr~iLl~~~lehp~i~YrQGMH 153 (625)
T KOG1091|consen 91 -----------------PQSVWNRFFRDAELEKTIDQDVSRTFPEHSLFFQSPEVQGMLRRILLLYALEHPEIGYRQGMH 153 (625)
T ss_pred -----------------CCchhhhhcCcHHHHHhhcchhhccCcchhhhhcCchhhHHHHHHHHHHHhhchhhhHHhhhh
Confidence 23458899999999999999999999999 899999999999999999999999999999999
Q ss_pred HHHHHHHhhccC-------------------h-----------hHHH--HHHHHHHHHhhcccc----------------
Q 014458 221 DLCSPMIILLEN-------------------E-----------ADAF--WCFERLMRRLRGNFR---------------- 252 (424)
Q Consensus 221 ~i~a~ll~~~~~-------------------E-----------~~af--~~~~~l~~~~~~~~~---------------- 252 (424)
++.|+++++... | .+.+ -+++.+|......|.
T Consensus 154 ElLAPl~fVl~~D~q~l~h~se~~~~~l~f~E~d~iy~~~y~k~d~dn~~lqs~lmls~~~~~e~e~g~~~~e~~ie~da 233 (625)
T KOG1091|consen 154 ELLAPLLFVLHVDNQALLHVSESLFDKLGFEERDVIYNFLYLKTDLDNTELQSVLMLSDEYGYEEELGIVLSEKLIEHDA 233 (625)
T ss_pred hhhhhhhhheehhHHHHHHHHHhhhhhcCcchhhhhhhHHHHhhhccchhHHHHHHhhhccccccCcceecCcccCCcCc
Confidence 999999987621 2 2333 355555543221111
Q ss_pred --C----CCChhhHHHHHHHHHHHHHhhCHHHHHHHHhCCCCCcchhHHHHHHhcCcCCChhhHHHHHH-HHHhcc
Q 014458 253 --C----TESSVGVETQLSNLASITQVIDPKLHQHLETLGGGDYLFAFRMLMVLFRREFSFCDSLYLWE-MMWALE 321 (424)
Q Consensus 253 --~----~~~~~~~~~~~~~~~~ll~~~dp~L~~hl~~~~i~~~~f~~~W~ltlF~~~l~~~~v~riWD-~~l~~g 321 (424)
+ ....+.+......+.++|...|+.|+.||.+.||.|++|.+||+..||.|+||+.+++.+|| ++++.+
T Consensus 234 y~~~d~l~~~l~~v~e~~~~~~~lL~~~D~~Lh~HL~~l~i~pqifgiRWlRlLFGREfpL~dLLiVWD~~l~~d~ 309 (625)
T KOG1091|consen 234 YVMFDALMPGLPPVFEANFAQYHLLAKVDKSLHSHLVELGIEPQIFGIRWLRLLFGREFPLQDLLIVWDHVLIFDS 309 (625)
T ss_pred ccchhhhcccchhHHHHhhhhhhhhhhccHHHHHHHHhcCCchHHHHHHHHHHHHcchhHHHHHHHHhhhhhhccC
Confidence 0 12234566677788999999999999999999999999999999999999999999999999 666654
No 12
>KOG2222 consensus Uncharacterized conserved protein, contains TBC, SH3 and RUN domains [Signal transduction mechanisms; General function prediction only]
Probab=99.96 E-value=1.2e-28 Score=237.00 Aligned_cols=215 Identities=22% Similarity=0.391 Sum_probs=179.4
Q ss_pred cHHHHHHHHhhCCCCCCchhhhhhhhhCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhhhhccccCCCcccccccccCCCC
Q 014458 51 DIGKTLSRIHRGGIHPSIRGEVWEFLLGCYEPKSTFDEREEIRQRRRLQYSAWKEECHQIFPVVGSGKFITAPVVTEDGQ 130 (424)
Q Consensus 51 ~~~kll~~~~~~GIp~~~R~~vW~~LLg~~p~~~~~~~~~~~~~~~~~~Y~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (424)
..++....+-.||||+.+|+..|+.|.|.+... +...-.|++.+++|..-.
T Consensus 158 ktdk~~~llkeggiphslr~~lw~rlsga~~kk----------k~ae~sy~~ilk~~andk------------------- 208 (848)
T KOG2222|consen 158 KTDKFEELLKEGGIPHSLRAFLWMRLSGALAKK----------KDAETSYEDILKACANDK------------------- 208 (848)
T ss_pred chHHHHHHHHcCCCCcchhHHHHHHhhhhhhhh----------ccccccHHHHHHHhcccc-------------------
Confidence 345544556677899999999999999985332 222336888888764211
Q ss_pred CCCCcccccccCCCCCCcchhHHHhhhcCCCchhHHHHHHHHHHHHhhhcCCCCCCcccccCh--hhHHHHHHHHHHHHh
Q 014458 131 PIQDPLVLQETNSGISASSSKMVKELLSHGPLDKKVIQWMLTLHQIGLDVIRTDRTLVFYEKQ--ENLSKLWDILAVYAW 208 (424)
Q Consensus 131 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qI~~Dv~RT~~~~~~f~~~--~~~~~L~rIL~~~~~ 208 (424)
+ ..-.||++|+.|+.|++..|.+. ++...|+|||.+.++
T Consensus 209 ~---------------------------------------~~~~qiekdllr~lpnn~cf~k~n~~gi~~lrrilk~ia~ 249 (848)
T KOG2222|consen 209 L---------------------------------------MIGKQIEKDLLRILPNNACFSKKNGEGIEALRRILKCIAF 249 (848)
T ss_pred c---------------------------------------chhHHHHHHHHHhCCCcceeeCCCCcchHHHHHHHhhhee
Confidence 0 14579999999999999999775 789999999999999
Q ss_pred hCCCCCCCCChhHHHHHHHhhccChhHHHHHHHHHHHHhh-ccccCCCChhhHHHHHHHHHHHHHhhCHHHHHHHHhCCC
Q 014458 209 VDRDVGYCQGMSDLCSPMIILLENEADAFWCFERLMRRLR-GNFRCTESSVGVETQLSNLASITQVIDPKLHQHLETLGG 287 (424)
Q Consensus 209 ~~p~~gY~QGm~~i~a~ll~~~~~E~~af~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~ll~~~dp~L~~hl~~~~i 287 (424)
..|++||||||.-|+|.+|+.+ .|+.|||++..+++.+. ++|+ .....|++..-.+..++++-+.|.|-+.|+..++
T Consensus 250 ifpdigycqg~gviva~lllf~-~ee~afwmmaaiiedilp~nfy-sqtllgiqaderv~~~li~~~l~~ldeal~~~di 327 (848)
T KOG2222|consen 250 IFPDIGYCQGMGVIVACLLLFC-EEENAFWMMAAIIEDILPANFY-SQTLLGIQADERVMHHLIACHLPDLDEALEDHDI 327 (848)
T ss_pred ecCCcccccCccHHHHHHHHHh-cchhHHHHHHHHHHHhcCchhh-hhhHhccchhHHHHHHHHHhccCchhHHHHhccc
Confidence 9999999999999999998888 77799999999999865 4554 4578899999999999999999999999999999
Q ss_pred CCcchhHHHHHHhcCcCCChhhHHHHHHHHHhccCCchHHHHHHHHHhh
Q 014458 288 GDYLFAFRMLMVLFRREFSFCDSLYLWEMMWALEYDPHLFYLYEEAESA 336 (424)
Q Consensus 288 ~~~~f~~~W~ltlF~~~l~~~~v~riWD~~l~~g~~~~~~~~~~~~~~~ 336 (424)
+.++.+..||+|+|+.++.....+||||.||.+| +..+|.+...++..
T Consensus 328 elslitl~w~ltlf~nv~~~killriwd~~fy~g-~i~ifql~i~ilkm 375 (848)
T KOG2222|consen 328 ELSLITLHWFLTLFANVFHMKILLRIWDFFFYEG-GINIFQLIIGILKM 375 (848)
T ss_pred eeeehHHHHHHHHHHHHHHHHHHHHHHHhheecC-cchhHHHHHHHHHh
Confidence 9999999999999999999999999999999886 56666666555544
No 13
>KOG2595 consensus Predicted GTPase activator protein [Signal transduction mechanisms]
Probab=99.95 E-value=3.6e-28 Score=225.94 Aligned_cols=183 Identities=19% Similarity=0.229 Sum_probs=160.1
Q ss_pred HHHHHhhhcCCCCCCcc----cccChhhHHHHHHHHHHHHhhCCCCCCCCChhHHHHHHHhhccChhHHHHHHHHHHHHh
Q 014458 172 TLHQIGLDVIRTDRTLV----FYEKQENLSKLWDILAVYAWVDRDVGYCQGMSDLCSPMIILLENEADAFWCFERLMRRL 247 (424)
Q Consensus 172 ~~~qI~~Dv~RT~~~~~----~f~~~~~~~~L~rIL~~~~~~~p~~gY~QGm~~i~a~ll~~~~~E~~af~~~~~l~~~~ 247 (424)
..+|+..|+.|++...+ .-.+...++.|..++......+|++.|+||+||||.+|++++ .|.+|+-++.++....
T Consensus 96 d~nQV~LDv~RSl~rfppg~p~~~R~~Lq~qL~~LI~rVl~~yP~L~YYQGyHDI~~tfLLv~-gE~~Al~l~E~L~~~~ 174 (395)
T KOG2595|consen 96 DYNQVILDVERSLGRFPPGIPKELRLQLQKQLTELILRVLRKYPTLNYYQGYHDIVVTFLLVV-GELEALSLMEELSTLH 174 (395)
T ss_pred ccceEEEehhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCcchhcchhHHHHHHHHhh-hhHhhhHHHHHHHHHH
Confidence 46799999999984433 333345677888888888899999999999999999999999 7999999999998876
Q ss_pred hccccCCCChhhHHHHHHHHHHHHHhhCHHHHHHHHhCCCCCcchhHHHHHHhcCcCC-ChhhHHHHHHHHHhccCCchH
Q 014458 248 RGNFRCTESSVGVETQLSNLASITQVIDPKLHQHLETLGGGDYLFAFRMLMVLFRREF-SFCDSLYLWEMMWALEYDPHL 326 (424)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~ll~~~dp~L~~hl~~~~i~~~~f~~~W~ltlF~~~l-~~~~v~riWD~~l~~g~~~~~ 326 (424)
.++|. .+++.+..+.+..+..+++..||+||+.|++..+++ +|+.+|++|||+|.+ ++..++|++|+|++.
T Consensus 175 lrdfM-~~Tld~t~~qL~~i~~iIk~~nP~Ly~~l~~aevgt-lFaLsWllTWFaH~L~~~~~vvRlfD~Flas------ 246 (395)
T KOG2595|consen 175 LRDFM-LPTLDFTVRQLRLISPIIKEVNPELYQFLQSAEVGT-LFALSWLLTWFAHNLKDIRIVVRLFDFFLAS------ 246 (395)
T ss_pred HHHHH-HHHHHHHHHHHHHHHHHHhhcChHHHHHHHhhcccc-eehhhHHHHHHhhcchhHHHHHHHHHHHHhc------
Confidence 66675 357788999999999999999999999999999987 999999999999999 899999999999995
Q ss_pred HHHHHHHHhhhccccccCcchhHHhhhhChhhhhhhcCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhcCchhHHHHHh
Q 014458 327 FYLYEEAESAASTKSEGSKAKAKSIRQCGKYERENMKNGAKTSEAPLPISVFLVASVLKDKSSKLLQEARGLDDVVKVSL 406 (424)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ail~~~r~~il~~~~~~dd~~~~~~ 406 (424)
++-+++|++|+|+..+|++|++|.+++.-++.++-
T Consensus 247 ---------------------------------------------~pl~piyv~A~vvL~r~~eIl~~~~dms~~H~lLs 281 (395)
T KOG2595|consen 247 ---------------------------------------------HPLLPIYVYAAVVLYRRSEILKCDCDMSLLHGLLS 281 (395)
T ss_pred ---------------------------------------------CcchhHHHHHHHhhhhHHHHHHHHhhhHHHHHHHH
Confidence 34488999999999999999999999998888874
Q ss_pred hh
Q 014458 407 IS 408 (424)
Q Consensus 407 ~~ 408 (424)
-+
T Consensus 282 ~i 283 (395)
T KOG2595|consen 282 TI 283 (395)
T ss_pred hC
Confidence 44
No 14
>KOG4347 consensus GTPase-activating protein VRP [General function prediction only]
Probab=99.95 E-value=8.3e-28 Score=240.37 Aligned_cols=236 Identities=19% Similarity=0.367 Sum_probs=200.7
Q ss_pred HHHHHhcCCCCC-ccH--HHHHHHHhhCCCCCCchhhhhhhhhCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhhhhcccc
Q 014458 38 RKWQAAFTPEGQ-LDI--GKTLSRIHRGGIHPSIRGEVWEFLLGCYEPKSTFDEREEIRQRRRLQYSAWKEECHQIFPVV 114 (424)
Q Consensus 38 ~~W~~~~~~~~~-i~~--~kll~~~~~~GIp~~~R~~vW~~LLg~~p~~~~~~~~~~~~~~~~~~Y~~l~~~~~~~~~~~ 114 (424)
..|++++.+.|+ ++. ...++.+.+.|+|...|++.|....|.. .-+-.+...|.++++....
T Consensus 174 k~W~~~f~~~G~~~~~~qt~~~~Klv~~gipe~~rgeiW~l~sGav----------~~~l~~~Geygkll~~~~G----- 238 (671)
T KOG4347|consen 174 KFWKKYFIKDGPNMNQIQTILLRKLLYNGFPEDPRGEIWYLASGAV----------ASLLLNPGEYGKLLHSVTG----- 238 (671)
T ss_pred HHHHHHHHHhcccccHHHHHHHHHHHHHhcCCChHHHHHHhhhHHH----------HHhhcCcHHhhhhhhcccC-----
Confidence 359999888766 443 2347888899999999999999999972 1234455678887765220
Q ss_pred CCCcccccccccCCCCCCCCcccccccCCCCCCcchhHHHhhhcCCCchhHHHHHHHHHHHHhhhcCCCCCCcccccChh
Q 014458 115 GSGKFITAPVVTEDGQPIQDPLVLQETNSGISASSSKMVKELLSHGPLDKKVIQWMLTLHQIGLDVIRTDRTLVFYEKQE 194 (424)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qI~~Dv~RT~~~~~~f~~~~ 194 (424)
+.+-..+.|++|..|+.|+++-|+.+.
T Consensus 239 -----------------------------------------------------~~~~a~eEIE~Dl~rsLpEhpA~Q~e~ 265 (671)
T KOG4347|consen 239 -----------------------------------------------------KRSVATEEIEPDLGRSLPEHPAFQSEP 265 (671)
T ss_pred -----------------------------------------------------CcccccccccCCCCCCCCcchhhhCCC
Confidence 001134679999999999999999999
Q ss_pred hHHHHHHHHHHHHhhCCCCCCCCChhHHHHHHHhhccChhHHHHHHHHHHHHhhccccCCCChhhHHHHHHHHHHHHHhh
Q 014458 195 NLSKLWDILAVYAWVDRDVGYCQGMSDLCSPMIILLENEADAFWCFERLMRRLRGNFRCTESSVGVETQLSNLASITQVI 274 (424)
Q Consensus 195 ~~~~L~rIL~~~~~~~p~~gY~QGm~~i~a~ll~~~~~E~~af~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~ 274 (424)
+...|+|||.+|++.||+|||||-||-+++.+++.+ .|++|||+++.+.+.+.+.|+. ....|......+++.+++..
T Consensus 266 gi~aLR~vL~Aya~~Np~vGYcQaMNIV~s~lll~~-~EEeafwll~~lce~~ip~yys-~~vvGtliDQ~vfe~lve~~ 343 (671)
T KOG4347|consen 266 GIAALRRVLTAYAWSNPEVGYCQAMNIVGSELLLFC-KEEEAFWLLSKLCEIYIPDYYS-KTVVGTLIDQSVFEELVEDT 343 (671)
T ss_pred chhhHHHHHHhhhccCCchhHHHHHHHHHHhhhhhh-ccchHHHHHHHHHHHhcccccc-hhhhhhHHHHHHHHHHHHHh
Confidence 999999999999999999999999999999998887 7889999999999998877764 45678888999999999999
Q ss_pred CHHHHHHHHhCCCCCcchhHHHHHHhcCcCCChhhHHHHHHHHHhccCCchHHHHHHHHHhhhccccccCcchhHHhhhh
Q 014458 275 DPKLHQHLETLGGGDYLFAFRMLMVLFRREFSFCDSLYLWEMMWALEYDPHLFYLYEEAESAASTKSEGSKAKAKSIRQC 354 (424)
Q Consensus 275 dp~L~~hl~~~~i~~~~f~~~W~ltlF~~~l~~~~v~riWD~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 354 (424)
.|.|++|+...| .-.+...+||+|+|-..+|++..+||-|+||.+|
T Consensus 344 lP~l~~~~~~l~-~l~~Vsl~WFlslFls~m~le~a~~ilD~FF~eG--------------------------------- 389 (671)
T KOG4347|consen 344 LPVLGEHLAVLG-QLSTVSLSWFLSLFLSLMPLEYAVRILDCFFYEG--------------------------------- 389 (671)
T ss_pred hhHHHHHhhhhc-ccceEeeHHHHHHHHHHcchHHHHHHHhhhhhcc---------------------------------
Confidence 999999999999 5568999999999999999999999999999975
Q ss_pred ChhhhhhhcCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHh
Q 014458 355 GKYERENMKNGAKTSEAPLPISVFLVASVLKDKSSKLLQEA 395 (424)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ail~~~r~~il~~~ 395 (424)
+.....|++||+..+.++|+.+.
T Consensus 390 ------------------~rvlFqiaLail~~N~~~il~~~ 412 (671)
T KOG4347|consen 390 ------------------PRVLFQIALAILKQNAERILSAT 412 (671)
T ss_pred ------------------cHHHHHHHHHHHHhhHHHhcccC
Confidence 34778899999999999999765
No 15
>KOG4436 consensus Predicted GTPase activator NB4S/EVI5 (contains TBC domain)/Calmodulin-binding protein Pollux (contains PTB and TBC domains) [General function prediction only]
Probab=99.93 E-value=6e-25 Score=223.10 Aligned_cols=191 Identities=21% Similarity=0.338 Sum_probs=164.5
Q ss_pred hHHHHHHHHHHHHhhhcCCCCCCcccccCh--hhHHHHHHHHHHHHhhCCCCCCCCChhHHHHHHHhhccChhHHHHHHH
Q 014458 164 KKVIQWMLTLHQIGLDVIRTDRTLVFYEKQ--ENLSKLWDILAVYAWVDRDVGYCQGMSDLCSPMIILLENEADAFWCFE 241 (424)
Q Consensus 164 ~~~~~~~~~~~qI~~Dv~RT~~~~~~f~~~--~~~~~L~rIL~~~~~~~p~~gY~QGm~~i~a~ll~~~~~E~~af~~~~ 241 (424)
+.+.+..+..+.|-.|.-||||++++|+.. .++..+.|+|.+|+..+|++|||||...+|+++|+.+ +|+.||-++.
T Consensus 613 ~llkqLte~qhAi~idlgrtfp~h~~~~~qlg~gqlsl~n~Lkayslld~e~gycqg~~fv~gvlllh~-~e~~afellk 691 (948)
T KOG4436|consen 613 ELLKQLTEQQHAILIDLGRTFPTHPYFSDQLGLGQLSLFNLLKAYSLLDPEVGYCQGLSFVAGVLLLHM-SEENAFELLK 691 (948)
T ss_pred HHHHHHHHHHHHHHHhhccccCCCHHHHhhccccHHHHHHHHHHhcccCccccccCcchhhhhhhHhhc-chhhHHHHHH
Confidence 444566677888999999999999999875 7899999999999999999999999999999999999 8899999999
Q ss_pred HHHHH--hhccccCCCChhhHHHHHHHHHHHHHhhCHHHHHHHHhCCCCCcchhHHHHHHhcCcCCChhhHHHHHHHHHh
Q 014458 242 RLMRR--LRGNFRCTESSVGVETQLSNLASITQVIDPKLHQHLETLGGGDYLFAFRMLMVLFRREFSFCDSLYLWEMMWA 319 (424)
Q Consensus 242 ~l~~~--~~~~~~~~~~~~~~~~~~~~~~~ll~~~dp~L~~hl~~~~i~~~~f~~~W~ltlF~~~l~~~~v~riWD~~l~ 319 (424)
.||.. ++..|.. .+..++..+..+.+++..+.++||+|+.+..|.|.+|+.+||+|.|+..||+.-+.|++|.+|.
T Consensus 692 ~LM~~r~~r~qy~p--dm~~lq~qmyqLsrl~hd~hrdlyn~le~~ei~pslyAapw~lt~fasQf~lGfvarvfd~~fl 769 (948)
T KOG4436|consen 692 FLMFDRGMRKQYRP--DMKKLQIQMYQLSRLLHDYHRDLYNHLEENEISPSLYAAPWFLTVFASQFPLGFVARVFDLIFL 769 (948)
T ss_pred HHHHHHhhHhhhch--HHHHHHHHHHHHHHHHHHHhHHHHHHHHhcccChHHhhhHHHHHHHHhhCcchHHHHHHHHHHh
Confidence 99975 4555654 4558888999999999999999999999999999999999999999999999999999999998
Q ss_pred ccCCchHHHHHHHHHhhhccccccCcchhHHhhhhChhhhhhhcCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhcCch
Q 014458 320 LEYDPHLFYLYEEAESAASTKSEGSKAKAKSIRQCGKYERENMKNGAKTSEAPLPISVFLVASVLKDKSSKLLQEARGLD 399 (424)
Q Consensus 320 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ail~~~r~~il~~~~~~d 399 (424)
.|. +...-++.++|..++..|+.+ .+|+
T Consensus 770 q~t---------------------------------------------------evifK~a~~llsv~k~~l~e~-dn~e 797 (948)
T KOG4436|consen 770 QGT---------------------------------------------------EVIFKVALSLLSVHKQLLLEK-DNFE 797 (948)
T ss_pred hcc---------------------------------------------------chhhhhHHHHHHhhHHHHHhh-hhHH
Confidence 643 244556677777666666644 4888
Q ss_pred hHHHHHhhhc
Q 014458 400 DVVKVSLISH 409 (424)
Q Consensus 400 d~~~~~~~~~ 409 (424)
+|++++..+.
T Consensus 798 ~i~d~~k~~~ 807 (948)
T KOG4436|consen 798 EIVDFLKTTL 807 (948)
T ss_pred HHHHHHHHhh
Confidence 8888876653
No 16
>KOG1102 consensus Rab6 GTPase activator GAPCenA and related TBC domain proteins [General function prediction only]
Probab=99.89 E-value=6.3e-23 Score=204.41 Aligned_cols=231 Identities=26% Similarity=0.411 Sum_probs=180.1
Q ss_pred cccCCCCCCCCCCCCCCcHHHHHHhcCCCCC------------c-cHHHHHHHHhhCCCCCCchhhhhhhhhCCCCCCCC
Q 014458 19 CTDVPKTRFKIKPGKTLSARKWQAAFTPEGQ------------L-DIGKTLSRIHRGGIHPSIRGEVWEFLLGCYEPKST 85 (424)
Q Consensus 19 ~~~~~~~~~~~~~~~~l~~~~W~~~~~~~~~------------i-~~~kll~~~~~~GIp~~~R~~vW~~LLg~~p~~~~ 85 (424)
+...+...+..++...++.++|..+..+... + .....+..+...|||..+|..+|..+++. +...
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~gip~~~r~~~W~l~~~~-~~~~- 165 (397)
T KOG1102|consen 88 YPKSDERIFKDKPLLSLTLDLWDVKLLEGEQELTALSSSWLKVILRRPLKLSRRVLVGIPDELRGLVWQLLLYA-VEES- 165 (397)
T ss_pred ccccccccccccccccccchhHHHHhhhhHHHHHHHHHHhhhhccccHHHHHHHhhccccHHHHHHHHHHhccc-Hhhh-
Confidence 3355666677788888999999888765311 1 12223566778899999999999999985 1000
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhccccCCCcccccccccCCCCCCCCcccccccCCCCCCcchhHHHhhhcCCCchhH
Q 014458 86 FDEREEIRQRRRLQYSAWKEECHQIFPVVGSGKFITAPVVTEDGQPIQDPLVLQETNSGISASSSKMVKELLSHGPLDKK 165 (424)
Q Consensus 86 ~~~~~~~~~~~~~~Y~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (424)
........|...... .. +
T Consensus 166 ------~~~~~~~l~~~~~~~---~~-------------------~---------------------------------- 183 (397)
T KOG1102|consen 166 ------LFDSLDELYRLQLDE---PE-------------------P---------------------------------- 183 (397)
T ss_pred ------hhhhHHHHHHHhhcc---CC-------------------C----------------------------------
Confidence 001111111111110 00 0
Q ss_pred HHHHHHHHHHHhhhcCCCCCCcccccCh--hhHHHHHHHHHHHHhhCCCCCCCCChhHHHHHHHhhccChhHHHHHHHHH
Q 014458 166 VIQWMLTLHQIGLDVIRTDRTLVFYEKQ--ENLSKLWDILAVYAWVDRDVGYCQGMSDLCSPMIILLENEADAFWCFERL 243 (424)
Q Consensus 166 ~~~~~~~~~qI~~Dv~RT~~~~~~f~~~--~~~~~L~rIL~~~~~~~p~~gY~QGm~~i~a~ll~~~~~E~~af~~~~~l 243 (424)
....+| .|+.||++.+..|+.. .+++.|.+|+.+|+.++|++||||||..++++++.++ .|++|||+++.+
T Consensus 184 -----~~~~~~-~d~~Rt~~~~~~f~~~~~~~q~sl~~vl~a~s~~~~~~gy~q~m~~~a~~ll~~~-~ee~af~~lv~l 256 (397)
T KOG1102|consen 184 -----HESEII-RDLSRTFPAHLLFRKRYGVGQRSLYNVLKAYSLYDPEVGYCQGMSSIAAPLLLYL-PEEEAFPLLVKL 256 (397)
T ss_pred -----chhHHH-hhccCcCcchhhhhhhcCcccccccccchhhcccCCCcccccchhhHhhhhhccC-chhhhhhhhhhh
Confidence 012466 9999999999999874 6789999999999999999999999999999999988 599999999999
Q ss_pred HHHhhccccCCCChhhHHHHHHHHHHHHHhhCHHHHHHHHhCCCCCcchhHHHHHHhcCcCCChhhHHHHHHHHHhcc
Q 014458 244 MRRLRGNFRCTESSVGVETQLSNLASITQVIDPKLHQHLETLGGGDYLFAFRMLMVLFRREFSFCDSLYLWEMMWALE 321 (424)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~dp~L~~hl~~~~i~~~~f~~~W~ltlF~~~l~~~~v~riWD~~l~~g 321 (424)
|......+. .....++...+..+..+++...|.++.|+.+.++...+|+.+|++|+|+..+|++.+.|+||.++.+|
T Consensus 257 ~~~~~~~~~-~~~~~~l~~~~~~~~~l~~~~~p~~~~~~~~~~~~~~~~~s~w~~t~f~~k~p~~~~~ri~d~~~~~g 333 (397)
T KOG1102|consen 257 MKNYGLDLL-SPGFSGLQRSFRQLQRLLKELIPKLLDHLLPQGIELSMYASQWFLTLFAAKFPLELVLRIWDALFVEG 333 (397)
T ss_pred hhccchhcc-cccCCchhhhHHHHHHHHHHhChhhhhhccccccccceeccceeeEeeeccccHHHHHHHhHHHHHhc
Confidence 987543333 45667999999999999999999999999999999999999999999999999999999999999976
No 17
>KOG2221 consensus PDZ-domain interacting protein EPI64, contains TBC domain [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.83 E-value=1.4e-21 Score=171.72 Aligned_cols=190 Identities=20% Similarity=0.402 Sum_probs=149.8
Q ss_pred cHHHHHHhcCCCCC-cc-HHHHHHHHhhCCCCCCchhhhhhhhhCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhhhhccc
Q 014458 36 SARKWQAAFTPEGQ-LD-IGKTLSRIHRGGIHPSIRGEVWEFLLGCYEPKSTFDEREEIRQRRRLQYSAWKEECHQIFPV 113 (424)
Q Consensus 36 ~~~~W~~~~~~~~~-i~-~~kll~~~~~~GIp~~~R~~vW~~LLg~~p~~~~~~~~~~~~~~~~~~Y~~l~~~~~~~~~~ 113 (424)
...+|..+++.... ++ ..+.++--++.|||+++|+..|++|.|...+.. +++..|..+..+
T Consensus 74 ReskwL~mldnw~~~m~kk~~~ir~rcrkgippslr~Raw~ylsGa~~~~~----------~np~~~~~~~~~------- 136 (267)
T KOG2221|consen 74 RESKWLHMLDNWHEEMRKKQKKIRPRCRKGIPPSLRGRAWRYLSGAPSPPP----------KNPVVFDELGPA------- 136 (267)
T ss_pred hHHHHHHHHHHHHHHHHhccccccchhhcCCCcccchhHHHhhcCCCCCCC----------CCcchhhhccCC-------
Confidence 44578888765211 11 123355667889999999999999999854422 123334433211
Q ss_pred cCCCcccccccccCCCCCCCCcccccccCCCCCCcchhHHHhhhcCCCchhHHHHHHHHHHHHhhhcCCCCCCcccccCh
Q 014458 114 VGSGKFITAPVVTEDGQPIQDPLVLQETNSGISASSSKMVKELLSHGPLDKKVIQWMLTLHQIGLDVIRTDRTLVFYEKQ 193 (424)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qI~~Dv~RT~~~~~~f~~~ 193 (424)
-|.| ...+-|.+|++|-||++.+|...
T Consensus 137 --------------pG~p---------------------------------------~t~e~i~kdl~rqfp~hemf~s~ 163 (267)
T KOG2221|consen 137 --------------PGDP---------------------------------------KTAEGIHKDLHRQFPFHEMFGSS 163 (267)
T ss_pred --------------CCCC---------------------------------------cchhhhccccccCCCcccccccc
Confidence 1111 13567999999999999999774
Q ss_pred --hhHHHHHHHHHHHHhhCCCCCCCCChhHHHHHHHhhccChhHHHHHHHHHHHHhhccccCCCChhhHHHHHHHHHHHH
Q 014458 194 --ENLSKLWDILAVYAWVDRDVGYCQGMSDLCSPMIILLENEADAFWCFERLMRRLRGNFRCTESSVGVETQLSNLASIT 271 (424)
Q Consensus 194 --~~~~~L~rIL~~~~~~~p~~gY~QGm~~i~a~ll~~~~~E~~af~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ll 271 (424)
.+++.|.|+|.+|..++|+.||||+-.-|+|+++..+ .+.+|||||+.+.+.+.+.|+. ..+..++..-.++..|+
T Consensus 164 ~k~gkqelfr~lka~ti~~pe~g~cq~qapiaa~llmhm-p~rdaf~~~vqicekylqgy~~-sgleaiq~dg~il~~Ll 241 (267)
T KOG2221|consen 164 GKTGKQELFRVLKAYTIYKPEEGYCQAQAPIAAVLLMHM-PARDAFWCFVQICEKYLQGYYS-SGLEAIQNDGGILEGLL 241 (267)
T ss_pred cccchHHHHHHHHHHHHhCchhhhhhhhchHHHHHHhcc-cHHHHHHHHHHHHHHHcccccc-cchhhhhcccHHHHHHH
Confidence 6799999999999999999999999999999998888 7889999999999997766653 35668888889999999
Q ss_pred HhhCHHHHHHHHhCCCCCcchhHHHH
Q 014458 272 QVIDPKLHQHLETLGGGDYLFAFRML 297 (424)
Q Consensus 272 ~~~dp~L~~hl~~~~i~~~~f~~~W~ 297 (424)
++.+|-.|.|+...+++|.+|...||
T Consensus 242 kk~~~p~~rH~~~~kvdp~lym~ewF 267 (267)
T KOG2221|consen 242 KKASPPPYRHLGGDKVDPLLYMTEWF 267 (267)
T ss_pred HhcCCCCCcccccCCCCHHHhhhccC
Confidence 99999999999999999999999997
No 18
>KOG4436 consensus Predicted GTPase activator NB4S/EVI5 (contains TBC domain)/Calmodulin-binding protein Pollux (contains PTB and TBC domains) [General function prediction only]
Probab=99.46 E-value=7.9e-13 Score=135.64 Aligned_cols=212 Identities=17% Similarity=0.159 Sum_probs=168.7
Q ss_pred HHHHHhhCCCCCCchhhhhhhhhCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhhhhccccCCCcccccccccCCCCCCCC
Q 014458 55 TLSRIHRGGIHPSIRGEVWEFLLGCYEPKSTFDEREEIRQRRRLQYSAWKEECHQIFPVVGSGKFITAPVVTEDGQPIQD 134 (424)
Q Consensus 55 ll~~~~~~GIp~~~R~~vW~~LLg~~p~~~~~~~~~~~~~~~~~~Y~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 134 (424)
.+...+.+|+|+..|..+|+.|+... .. ++ ....+.|+++.......
T Consensus 176 ~l~e~Ve~~~p~~frli~~qlLssat-d~------~q--~~I~e~~sdl~~~s~~~------------------------ 222 (948)
T KOG4436|consen 176 KLKELVEGGIPMHFRLIRWQLLSSAT-DR------EQ--ALIFEDYSDLAPCSSQQ------------------------ 222 (948)
T ss_pred hhHHHHhcCCchHHHHHHHHHhcccc-cc------hh--hHHHHHHHHHhhhcchh------------------------
Confidence 36677899999999999999998752 11 11 12334566665432100
Q ss_pred cccccccCCCCCCcchhHHHhhhcCCCchhHHHHHHHHHHHHhhhcCCCCCCcccccCh-h--------hHHHHHHHHHH
Q 014458 135 PLVLQETNSGISASSSKMVKELLSHGPLDKKVIQWMLTLHQIGLDVIRTDRTLVFYEKQ-E--------NLSKLWDILAV 205 (424)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qI~~Dv~RT~~~~~~f~~~-~--------~~~~L~rIL~~ 205 (424)
++ ......|..|+.||.+.+.+|+.. . +++.|+|+..+
T Consensus 223 ----------------------------Ek-----~~~~~~Irrdi~~~~~eh~~fke~~s~~~~~~~~~~d~LfN~~K~ 269 (948)
T KOG4436|consen 223 ----------------------------EK-----ELHIGIIRRDIERTYPEHYFFKEQSSTVCSDIRFAQDQLFNVAKA 269 (948)
T ss_pred ----------------------------hh-----hHHHHHHHHHhhccCcceeeeccCccCCcchhHHHHHHHHHHHHH
Confidence 01 124568999999999999999875 2 58999999999
Q ss_pred HHhhCCCCCCCCChhHHHHHHHhhccChhHHHHHHHHHHHHhhccccCCCChhhHHHHHHHHHHHHHhhCH-HHHHHHHh
Q 014458 206 YAWVDRDVGYCQGMSDLCSPMIILLENEADAFWCFERLMRRLRGNFRCTESSVGVETQLSNLASITQVIDP-KLHQHLET 284 (424)
Q Consensus 206 ~~~~~p~~gY~QGm~~i~a~ll~~~~~E~~af~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~dp-~L~~hl~~ 284 (424)
|+...-++|||||-+.+++.+++.+ +++.+|..++.+|...+..-..++.+..+...+..+....+...| +|+.|+.+
T Consensus 270 ~~~~~~E~ifsqGs~~m~Gll~l~~-~~E~assv~~~lm~~~rl~~l~kpe~~~l~~~~~q~e~~~q~~sp~dl~sH~~e 348 (948)
T KOG4436|consen 270 YSTKDLEVIFSQGSAFMVGLLLLQM-PVEEASSVKVQLMILYRLRELSKPEMEPLGLCMFQLECTNQDQSPMDLFSHFPE 348 (948)
T ss_pred HhhhhhhhhhccchHHHHHHHHhcC-cHHHHHHHHHHHHHhhcccccCCcccchhHHHHHhhcccccccchhHHhhcccc
Confidence 9999999999999999999887777 788999999999987654444455566677788888999999999 99999999
Q ss_pred CCCCCcchhHHHHHHhcCcCCChhhHHHHHHHHHhccCCchHHHHHHHH
Q 014458 285 LGGGDYLFAFRMLMVLFRREFSFCDSLYLWEMMWALEYDPHLFYLYEEA 333 (424)
Q Consensus 285 ~~i~~~~f~~~W~ltlF~~~l~~~~v~riWD~~l~~g~~~~~~~~~~~~ 333 (424)
.+++.++++..||++.|...||+...-|+.|.+.+.|.....-..+++.
T Consensus 349 q~~h~S~~~rs~flt~~ltt~Pi~~a~r~~~~f~~egllk~fr~~ia~~ 397 (948)
T KOG4436|consen 349 QHFHTSMYARSWFLTNFLTTFPIFMAARISDTFSSEGLLKRFRDSIAYL 397 (948)
T ss_pred cCCCccHHHHHHHHHhhcccCchhhccccccccccccHHHHHhhhHHHH
Confidence 9999999999999999999999999999999999987554444445555
No 19
>KOG1648 consensus Uncharacterized conserved protein, contains RUN, BRK and TBC domains [General function prediction only]
Probab=99.37 E-value=5.9e-14 Score=136.68 Aligned_cols=224 Identities=26% Similarity=0.413 Sum_probs=171.3
Q ss_pred CCCCCCCCCCCcHHHHHHhcCCCCCccHHHHHHHHhhCCCCCCchhhhhhhhhCCCCCCCCHHHHHHHHHHHHHHHHHHH
Q 014458 25 TRFKIKPGKTLSARKWQAAFTPEGQLDIGKTLSRIHRGGIHPSIRGEVWEFLLGCYEPKSTFDEREEIRQRRRLQYSAWK 104 (424)
Q Consensus 25 ~~~~~~~~~~l~~~~W~~~~~~~~~i~~~kll~~~~~~GIp~~~R~~vW~~LLg~~p~~~~~~~~~~~~~~~~~~Y~~l~ 104 (424)
+...|+++.+++.+.|.++..+ ..+..-+.++..++||+....|+.+|+.+++.+...+...+-+.......+.|+..+
T Consensus 521 pD~pcda~~glt~~~W~qy~~d-~t~~e~~~l~~~~~g~~e~~~r~~~~p~~~~~~~~g~~~~~~d~~e~~~s~~y~~~l 599 (813)
T KOG1648|consen 521 PDDPCDASAGLTEKFWKQYRAD-PTIEEWRVLEAEVRGRDEEAFRAARAPKAASPVREGSCDVFEDPNEPTCSQHYDRNL 599 (813)
T ss_pred CCCCCCccccccHHHHHHHhcC-CchHHHHHHHHHHhcccHHHHhhcccccccccccccccchhcCCCccHHHHHHHHHH
Confidence 5677899999999999999644 577766778999999999999999999999998777755444444444445565544
Q ss_pred HHhhhhccccCCCcccccccccCCCCCCCCcccccccCCCCCCcchhHHHhhhcCCCchhHHHHHHHHHHHHhhhcCCCC
Q 014458 105 EECHQIFPVVGSGKFITAPVVTEDGQPIQDPLVLQETNSGISASSSKMVKELLSHGPLDKKVIQWMLTLHQIGLDVIRTD 184 (424)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qI~~Dv~RT~ 184 (424)
-.+.. .....|++|+.|+.
T Consensus 600 ~~~~~-------------------------------------------------------------~~~~~~~kd~e~~~ 618 (813)
T KOG1648|consen 600 ITLFR-------------------------------------------------------------ANLHRIDKDVERCD 618 (813)
T ss_pred HHHHh-------------------------------------------------------------hheeeecchhhhCc
Confidence 33321 23567999999999
Q ss_pred CCcccccChhhHHHHHHHHHHHHhhCCCCCCCCChhHHHHHHHhhccChhHHHHHHHHHHHHhhccccCCCChhhHHHHH
Q 014458 185 RTLVFYEKQENLSKLWDILAVYAWVDRDVGYCQGMSDLCSPMIILLENEADAFWCFERLMRRLRGNFRCTESSVGVETQL 264 (424)
Q Consensus 185 ~~~~~f~~~~~~~~L~rIL~~~~~~~p~~gY~QGm~~i~a~ll~~~~~E~~af~~~~~l~~~~~~~~~~~~~~~~~~~~~ 264 (424)
.+.-+|.+..+.+. +++..+|...+-+-||.|||.++.++++..+.+|+.+--||.-+|-+-+..|..-+ |+...+
T Consensus 619 ~~~~~fs~~~~les-~~~~~~~~~~~l~~~~~~~~~dl~~p~~~~~ed~~~~~e~~s~~~~~q~~~~~q~~---~~~~~l 694 (813)
T KOG1648|consen 619 RNLMFFSNKDNLES-RRVMYTYVRRNLEEGYTQGMCDLLAPLLVTFEDEALTLECFSLLMLRQRGKFPQRP---GMSKCL 694 (813)
T ss_pred chheeecCCcchhh-heeeeeeeccccccccccchhhccCCcCCChhhcccccCCCcHHHHHhcccCCCCC---Cccccc
Confidence 99999999988887 88889999999999999999999999999999988888788888877666664322 444443
Q ss_pred HHHHHHHHhhCHHHHHHHHhCCCCCcchhHHHHHHhcCcCCChhhHHHHHHHHHhc
Q 014458 265 SNLASITQVIDPKLHQHLETLGGGDYLFAFRMLMVLFRREFSFCDSLYLWEMMWAL 320 (424)
Q Consensus 265 ~~~~~ll~~~dp~L~~hl~~~~i~~~~f~~~W~ltlF~~~l~~~~v~riWD~~l~~ 320 (424)
-.+. +++..+|-.. -+.. .+-..++||+.-|.++++.+....+|..+++.
T Consensus 695 ~~~r-~~~v~~~l~s-~id~----~qa~~f~~~~~~~~~~~s~~~~~~~~~~~~~~ 744 (813)
T KOG1648|consen 695 LNLR-LIQVVDPLIS-DIDY----AQALSFRWFLLDFKRELSYECTYKVWEVIWAA 744 (813)
T ss_pred cccc-chhhhcchhc-chhh----hhhcceeeeccCcccccCCCCcceeeEeeccc
Confidence 3333 6666666221 1111 22345999999999999999999999999884
No 20
>KOG3636 consensus Uncharacterized conserved protein, contains TBC and Rhodanese domains [General function prediction only]
Probab=99.33 E-value=6.9e-12 Score=121.25 Aligned_cols=155 Identities=19% Similarity=0.233 Sum_probs=124.2
Q ss_pred HHHHHHHHHHHHhhCCCCCCCC--ChhHHHHHHHhhccChhHHHHHHHHHHHHhhccccCCCChhhHHHHHHHHHHHHHh
Q 014458 196 LSKLWDILAVYAWVDRDVGYCQ--GMSDLCSPMIILLENEADAFWCFERLMRRLRGNFRCTESSVGVETQLSNLASITQV 273 (424)
Q Consensus 196 ~~~L~rIL~~~~~~~p~~gY~Q--Gm~~i~a~ll~~~~~E~~af~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~ 273 (424)
...|..++.-|+. +.++.|.. |--.+.-+++.+-.+-.+.|-||..+++++.+.-.... ...+..|+-||+.
T Consensus 92 v~dlES~iTfYCK-~Rn~~Y~~d~gWi~lL~pl~~L~lprsd~fN~F~ai~~kYIPkdcrpk-----g~~Fh~FRLLlqY 165 (669)
T KOG3636|consen 92 VSDLESFITFYCK-KRNMDYIKDIGWITLLEPLLLLNLPRSDEFNVFFAITTKYIPKDCRPK-----GQIFHLFRLLLQY 165 (669)
T ss_pred hHhhhhHhhhhhh-ccCCcccccccHHHHHHHHHHhcCCcchhhhhhHhhhhcccCCCCCCC-----CccchHHHHHHHh
Confidence 3456667776754 44566665 44466777777777888999999999988655443322 1356788999999
Q ss_pred hCHHHHHHHHhCCCCCcchhHHHHHHhcCcCCChhhHHHHHHHHHhccCCchHHHHHHHHHhhhccccccCcch--hHHh
Q 014458 274 IDPKLHQHLETLGGGDYLFAFRMLMVLFRREFSFCDSLYLWEMMWALEYDPHLFYLYEEAESAASTKSEGSKAK--AKSI 351 (424)
Q Consensus 274 ~dp~L~~hl~~~~i~~~~f~~~W~ltlF~~~l~~~~v~riWD~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~ 351 (424)
+||+|..||....+.|.+|+..||-+||+...+.+.+.-+||.++-.++.+.+|++...++..|++.|+..+++ .+.+
T Consensus 166 HdPelc~~LdtkkitPd~Y~lnWf~sLFas~~Stev~~a~WdlY~qqaDPF~vffLaliiLiNake~ILq~~sdsKEe~i 245 (669)
T KOG3636|consen 166 HDPELCNHLDTKKITPDMYTLNWFASLFASSMSTEVCHALWDLYIQQADPFLVFFLALIILINAKEEILQVKSDSKEEAI 245 (669)
T ss_pred cCHHHhhhhhccccCchHHHHHHHHHHHHHhhhHHHHHHHHHHHHhcCCceehHHHHHHHhcccHHHHhhhccccHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999888888889998876654 4555
Q ss_pred hhhCh
Q 014458 352 RQCGK 356 (424)
Q Consensus 352 ~~~~~ 356 (424)
+...+
T Consensus 246 kfLen 250 (669)
T KOG3636|consen 246 KFLEN 250 (669)
T ss_pred HHHHc
Confidence 55433
No 21
>KOG2801 consensus Probable Rab-GAPs [Intracellular trafficking, secretion, and vesicular transport]
Probab=97.86 E-value=0.0003 Score=65.57 Aligned_cols=143 Identities=13% Similarity=0.124 Sum_probs=103.8
Q ss_pred hhhHHHHHHHHHHHHhhCCCCCCCCChhHHHHHHHhhccChhHHHHHHHHHHHHhh-ccccCCCChhhHHHHHHHHHHHH
Q 014458 193 QENLSKLWDILAVYAWVDRDVGYCQGMSDLCSPMIILLENEADAFWCFERLMRRLR-GNFRCTESSVGVETQLSNLASIT 271 (424)
Q Consensus 193 ~~~~~~L~rIL~~~~~~~p~~gY~QGm~~i~a~ll~~~~~E~~af~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~ll 271 (424)
..+.-..+.||.+.+...|++++|..+..+++.++...-+|+++|--.++++..-. ..-.-+.++......+..|..++
T Consensus 108 argegavrkilKOGanqfpdisfcpalpavvalllhysideaecfekacrilacndpgrrlidqsflafesscmtfgdlv 187 (559)
T KOG2801|consen 108 ARGEGAVRKILLCLANQFPDISFCPALPAVVALLLHYSIDEAECFEKACRILACNDPGRRLIDQSFLAFESSCMTFGDLV 187 (559)
T ss_pred CcCchhHHHHHHHHhccCCCcccCcchHHHHHHHHHhcccHHHHHHHhheeeeecCcchhhhhhHHHHHHhhhhhHHHHH
Confidence 45667788999999999999999999999999998888899999887777664211 00111233445666777888888
Q ss_pred HhhCHHHHHHHHhCCCCCcchhHHHHHHhcCcCCChhhHHHHHHHHHhccCCchHHHHHHHHHhh
Q 014458 272 QVIDPKLHQHLETLGGGDYLFAFRMLMVLFRREFSFCDSLYLWEMMWALEYDPHLFYLYEEAESA 336 (424)
Q Consensus 272 ~~~dp~L~~hl~~~~i~~~~f~~~W~ltlF~~~l~~~~v~riWD~~l~~g~~~~~~~~~~~~~~~ 336 (424)
.+....-++.+....-+.......|-.-+| .++|+.-..|++|.|+.+|+...+-..++++..-
T Consensus 188 nkycqaahklmvavsedvlqvyadwqrwlf-gelplcyfarvfdvflvegykvlyrvalailkff 251 (559)
T KOG2801|consen 188 NKYCQAAHKLMVAVSEDVLQVYADWQRWLF-GELPLCYFARVFDVFLVEGYKVLYRVALAILKFF 251 (559)
T ss_pred HHHHHHHHHHhhhhhHHHHHHHHHHHHHHh-ccchHHHHHHHhhheeecchHHHHHHHHHHHHHH
Confidence 888887777776543333333455655444 5799999999999999999876666666655543
No 22
>PF14961 BROMI: Broad-minded protein
Probab=96.84 E-value=0.022 Score=63.04 Aligned_cols=146 Identities=14% Similarity=0.153 Sum_probs=96.9
Q ss_pred HHHHHHHhhCCCCCCCCChhHHHHHHHhhcc-ChhHHHHHHHHHHHHhhcccc--------CCCCh----hhH----HHH
Q 014458 201 DILAVYAWVDRDVGYCQGMSDLCSPMIILLE-NEADAFWCFERLMRRLRGNFR--------CTESS----VGV----ETQ 263 (424)
Q Consensus 201 rIL~~~~~~~p~~gY~QGm~~i~a~ll~~~~-~E~~af~~~~~l~~~~~~~~~--------~~~~~----~~~----~~~ 263 (424)
++++.|..+...-+|. |..-.++.+++++. |-..+.-.+.+|-..+..-|. ..... .|+ --.
T Consensus 1088 ~~~~~~~~~~~~~~y~-g~DWFvstvfli~~Gd~e~~~~fL~~fS~ll~SaflW~pRlh~s~~l~~~~~~s~i~p~~~~~ 1166 (1296)
T PF14961_consen 1088 HILFEFIHFCLQGSYP-GHDWFVSTVFLIMLGDKERSLQFLQRFSRLLTSAFLWPPRLHASIHLPVDTAESGIHPVYFCS 1166 (1296)
T ss_pred HHHhhhhcccCCCCCC-CchhHHHHHHHHHcCChhHhHHHHHHHHHHHHHhHhccccccccccCCchhhhcCCCchhhhH
Confidence 3444444445544555 88877777777664 444455444444433211110 00000 111 125
Q ss_pred HHHHHHHHHhhCHHHHHHHHhCCCCCcchhHHHHHHhcCcCCChhhHHHHHHHHHhccCCchHHHHHHHHHhhhcccccc
Q 014458 264 LSNLASITQVIDPKLHQHLETLGGGDYLFAFRMLMVLFRREFSFCDSLYLWEMMWALEYDPHLFYLYEEAESAASTKSEG 343 (424)
Q Consensus 264 ~~~~~~ll~~~dp~L~~hl~~~~i~~~~f~~~W~ltlF~~~l~~~~v~riWD~~l~~g~~~~~~~~~~~~~~~~~~~~~~ 343 (424)
+..++.+|+...|.+|.-|.-.|..|...|.+|+..||=+.++...++..-=..+..
T Consensus 1167 ~~~vE~ll~~E~P~V~saf~~sg~tpsqi~~rW~~QcFWnyldW~eI~~y~~~cil~----------------------- 1223 (1296)
T PF14961_consen 1167 CHYVEMLLKAELPLVFSAFRMSGFTPSQICQRWLSQCFWNYLDWPEICHYIAICILY----------------------- 1223 (1296)
T ss_pred HHHHHHHHHhhccHHHHHHHHcCCCHHHHHHHHHHHHhhhcCCHHHHHHHHHHHHhc-----------------------
Confidence 688999999999999999999999999999999999999999987766443333332
Q ss_pred CcchhHHhhhhChhhhhhhcCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhcCc
Q 014458 344 SKAKAKSIRQCGKYERENMKNGAKTSEAPLPISVFLVASVLKDKSSKLLQEARGL 398 (424)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ail~~~r~~il~~~~~~ 398 (424)
++++.+|+|+|+++..+..||+.....
T Consensus 1224 ----------------------------G~dyqvY~~VailkHlq~~ilq~~q~q 1250 (1296)
T PF14961_consen 1224 ----------------------------GPDYQVYICVAILKHLQPEILQHTQTQ 1250 (1296)
T ss_pred ----------------------------CccceeehhHHHHHHhhHHHHHhhhhc
Confidence 455888889999998888888776444
No 23
>KOG2224 consensus Uncharacterized conserved protein, contains TBC domain [Signal transduction mechanisms; General function prediction only]
Probab=96.11 E-value=0.0017 Score=63.56 Aligned_cols=33 Identities=52% Similarity=1.027 Sum_probs=31.1
Q ss_pred CCCCCChhHHHHHHHhhccChhHHHHHHHHHHH
Q 014458 213 VGYCQGMSDLCSPMIILLENEADAFWCFERLMR 245 (424)
Q Consensus 213 ~gY~QGm~~i~a~ll~~~~~E~~af~~~~~l~~ 245 (424)
+|-.|||++++|++|.-..+|.++||||+.||+
T Consensus 566 vglmqgmsdlvapilaevldesdtfwcfvglmq 598 (781)
T KOG2224|consen 566 VGLMQGMSDLVAPILAEVLDESDTFWCFVGLMQ 598 (781)
T ss_pred hhhhccchhhhhhHHHhhhccccchhhhhhhhc
Confidence 678899999999999988899999999999997
No 24
>KOG2197 consensus Ypt/Rab-specific GTPase-activating protein GYP7 and related proteins [Signal transduction mechanisms]
Probab=84.37 E-value=0.51 Score=48.85 Aligned_cols=75 Identities=32% Similarity=0.460 Sum_probs=60.4
Q ss_pred CcHHHHHHhcCCCCCccHHH-HHHHHhhCCCCCCchhhhhhhhhCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhhhh
Q 014458 35 LSARKWQAAFTPEGQLDIGK-TLSRIHRGGIHPSIRGEVWEFLLGCYEPKSTFDEREEIRQRRRLQYSAWKEECHQI 110 (424)
Q Consensus 35 l~~~~W~~~~~~~~~i~~~k-ll~~~~~~GIp~~~R~~vW~~LLg~~p~~~~~~~~~~~~~~~~~~Y~~l~~~~~~~ 110 (424)
++.++|.....++++++... ....+.++|+-+.+|+.+|+.++++++.+.+..++...... ...|...+.+|...
T Consensus 148 ~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~k~qW~~~ 223 (488)
T KOG2197|consen 148 LTLEEYNSNAMREGRLDESVHQRERIFSGGLSKSLRAEVWKFLLDYSPWDSTTRERVSLRKL-TDEYFRLKLQWSST 223 (488)
T ss_pred chhhhhhhhhhhccccccchhhhheecccccccchhhhhhhhhhcccCcccccccccccccc-cccHhhhhhhheec
Confidence 78999999998888874322 23377788887799999999999999999998887777666 77888888877643
No 25
>PF08109 Antimicrobial14: Lactocin 705 family; InterPro: IPR012517 This family consists of lactocin 705 which is a bacteriocin produced by Lactobacillus casei CRL 705. Lactocin 705 is a class IIb bacteriocin, whose activity depends upon the complementation of two peptides (705-alpha and 705-beta) of 33 amino acid residues each. Lactocin 705 is active against several Gram-positive bacteria, including food-borne pathogens and is a good candidate to be used for biopreservation of fermented meats [].
Probab=29.36 E-value=38 Score=19.85 Aligned_cols=14 Identities=36% Similarity=0.667 Sum_probs=10.1
Q ss_pred CCCCCChhHHHHHH
Q 014458 213 VGYCQGMSDLCSPM 226 (424)
Q Consensus 213 ~gY~QGm~~i~a~l 226 (424)
-||.||+.+..--.
T Consensus 3 sgyiqgipdflkgy 16 (31)
T PF08109_consen 3 SGYIQGIPDFLKGY 16 (31)
T ss_pred cccccccHHHHHHH
Confidence 37999998865443
No 26
>PF13041 PPR_2: PPR repeat family
Probab=20.82 E-value=1.2e+02 Score=20.04 Aligned_cols=26 Identities=15% Similarity=0.253 Sum_probs=20.4
Q ss_pred HHHHHHHhCCCCCcchhHHHHHHhcC
Q 014458 277 KLHQHLETLGGGDYLFAFRMLMVLFR 302 (424)
Q Consensus 277 ~L~~hl~~~~i~~~~f~~~W~ltlF~ 302 (424)
++++.+.+.|+.|..+++.-++..|+
T Consensus 24 ~l~~~M~~~g~~P~~~Ty~~li~~~~ 49 (50)
T PF13041_consen 24 KLFKEMKKRGIKPDSYTYNILINGLC 49 (50)
T ss_pred HHHHHHHHcCCCCCHHHHHHHHHHHc
Confidence 47788888999998888877776654
No 27
>PRK10878 hypothetical protein; Provisional
Probab=20.19 E-value=1.4e+02 Score=22.34 Aligned_cols=29 Identities=17% Similarity=0.237 Sum_probs=24.1
Q ss_pred HHHHHHHHHHHHhhCHHHHHHHHhCCCCC
Q 014458 261 ETQLSNLASITQVIDPKLHQHLETLGGGD 289 (424)
Q Consensus 261 ~~~~~~~~~ll~~~dp~L~~hl~~~~i~~ 289 (424)
......|..+|...||+||..+...+-.+
T Consensus 21 ~~e~~~Fe~LL~~~D~dL~~W~~g~~~p~ 49 (72)
T PRK10878 21 DDEKRIFIRLLECDDPDLFNWLMNHGKPA 49 (72)
T ss_pred HHHHHHHHHHHcCCCHHHHHHHhCCCCCC
Confidence 35778999999999999999998765543
Done!