BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 014459
(424 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P46547|PIP_AERSO Proline iminopeptidase OS=Aeromonas sobria GN=pip PE=1 SV=3
Length = 425
Score = 265 bits (677), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 152/350 (43%), Positives = 211/350 (60%), Gaps = 26/350 (7%)
Query: 63 VSSPEHVAGKWYSVPDLRLRDHRFTVPLDYALDRDVSPKISLFAREVVAVGKEEQSLPYL 122
+SSP H Y + + H FTVPLD+ D I+LF R + + + LP+L
Sbjct: 1 MSSPLH-----YVLDGIHCEPHFFTVPLDHQ-QPDDEETITLFGRTLCRKDRLDDELPWL 54
Query: 123 LFLQGGPGFECRGPTESSGWINKACEEFRVVLMDQRGTGLSTPLSVSSMLQMKSAKDLVD 182
L+LQGGPGF P+ + GWI +A +EFRV+L+DQRGTG STP+ + +L + + D
Sbjct: 55 LYLQGGPGFGAPRPSANGGWIKRALQEFRVLLLDQRGTGHSTPIH-AELLAHLNPRQQAD 113
Query: 183 YLKHFRADSIVNDAEFIRVRLDPDAKPWTVLGQSYGGFCAVTYLSFAPQGLKQVLLTGGT 242
YL HFRADSIV DAE IR +L PD PW++LGQS+GGFC++TYLS P L +V LTGG
Sbjct: 114 YLSHFRADSIVRDAELIREQLSPD-HPWSLLGQSFGGFCSLTYLSLFPDSLHEVYLTGGV 172
Query: 243 PPLGNGCSADSVYRVAFEQVIRQNEKYYKRFPQDVEIVREIVKHLAESEGGGVLLPSGGI 302
P+G SAD VYR +++V +N ++ RFP I + HL + V LP+G
Sbjct: 173 APIGR--SADEVYRATYQRVADKNRAFFARFPHAQAIANRLATHLQRHD---VRLPNGQR 227
Query: 303 LTPRVLQLVGLSALGSSTGFERLHYMLETAWDPVIVPGAPKLLSYCFLKAVENFLSFDTN 362
LT LQ GL LG+S FE L+Y+LE A+ + L+ FL V+ F+TN
Sbjct: 228 LTVEQLQQQGLD-LGASGAFEELYYLLEDAF-------IGEKLNPAFLYQVQAMQPFNTN 279
Query: 363 PLYALMQETIYCQGASSQWSAQRIRAEYEGKFDAIKAAKEDHPVLFTGEV 412
P++A++ E IYC+GA+S W+A+R+R G+F A+ A + FTGE+
Sbjct: 280 PVFAILHELIYCEGAASHWAAERVR----GEFPAL-AWAQGKDFAFTGEM 324
>sp|P93732|PIP_ARATH Proline iminopeptidase OS=Arabidopsis thaliana GN=PIP PE=2 SV=3
Length = 380
Score = 48.1 bits (113), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 53/119 (44%), Gaps = 21/119 (17%)
Query: 122 LLFLQGGPGFECRGPTESSGWINKACEEFRVVLMDQRGTGLSTPLSVSSMLQMKSAKDLV 181
++FL GGPG G T S E +R+VL DQRG G STP + L+ + DL
Sbjct: 99 VVFLHGGPG----GGTAPSNRRFFDPEFYRIVLFDQRGAGKSTP---HACLEENTTWDL- 150
Query: 182 DYLKHFRADSIVNDAEFIRVRLDPDAKPWTVLGQSYGGFCAVTYLSFAPQGLKQVLLTG 240
VND E +R L W V G S+G A+ Y P + ++L G
Sbjct: 151 -----------VNDIEKLREHL--KIPEWLVFGGSWGSTLALAYSQSHPDKVTGLVLRG 196
>sp|Q9PD69|PIP_XYLFA Proline iminopeptidase OS=Xylella fastidiosa (strain 9a5c) GN=pip
PE=3 SV=1
Length = 313
Score = 47.8 bits (112), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 65/154 (42%), Gaps = 30/154 (19%)
Query: 96 RDVSPKISLFAREVVAVGK------EEQSLPY---LLFLQGGPGFECRGPTESSGWINKA 146
R + P+++ F ++ V E+ P+ ++ L GGPG C
Sbjct: 2 RTLYPEVTPFEHGILCVDDNHRLYYEQCGNPHGKPVVILHGGPGSGCNDKMRRF----HD 57
Query: 147 CEEFRVVLMDQRGTGLSTPLSVSSMLQMKSAKDLVDYLKHFRADSIVNDAEFIRVRLDPD 206
+++R+VL DQRG G STP + L + DL V D E +RV L
Sbjct: 58 PDKYRIVLFDQRGAGRSTP---HANLTNNTTWDL------------VADIEKLRVAL--G 100
Query: 207 AKPWTVLGQSYGGFCAVTYLSFAPQGLKQVLLTG 240
W V G S+G A+ Y P+ +++L G
Sbjct: 101 ITRWQVFGGSWGSTLALAYAQTHPEQTTELVLRG 134
>sp|A5I3F5|PIP_CLOBH Proline iminopeptidase OS=Clostridium botulinum (strain Hall / ATCC
3502 / NCTC 13319 / Type A) GN=pip PE=3 SV=1
Length = 293
Score = 46.6 bits (109), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 64/146 (43%), Gaps = 36/146 (24%)
Query: 122 LLFLQGGPG-----FECRGPTESSGWINKACEEFRVVLM-DQRGTGLSTPLSVSSMLQMK 175
L+ L GGPG FE ++K E+ R V+M DQ G GLS S + K
Sbjct: 30 LVLLHGGPGSTHNYFEV---------LDKVAEDGRAVIMYDQLGCGLSATPSRPDLWNAK 80
Query: 176 S-AKDLVDYLKHFRADSIVNDAEFIRVRLDPDAKPWTVLGQSYGGFCAVTY-LSFAPQGL 233
+ ++L+ KH D I +LGQS+GG A+ Y + P+G+
Sbjct: 81 TWIEELIQLRKHLGLDEI------------------HLLGQSWGGMQAIQYACEYKPEGI 122
Query: 234 KQVLLTGGTPPLGNGCSADSVYRVAF 259
K +L+ T P + + RVA+
Sbjct: 123 KSYILS-STLPAASLWEKEQRRRVAY 147
>sp|P52279|PIP_XANCI Proline iminopeptidase OS=Xanthomonas campestris pv. citri GN=pip
PE=1 SV=2
Length = 313
Score = 46.2 bits (108), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 51/119 (42%), Gaps = 21/119 (17%)
Query: 122 LLFLQGGPGFECRGPTESSGWINKACEEFRVVLMDQRGTGLSTPLSVSSMLQMKSAKDLV 181
++ L GGPG C ++R+VL DQRG+G STP + DLV
Sbjct: 37 VVMLHGGPGGGCNDKMRRF----HDPAKYRIVLFDQRGSGRSTPHA-----------DLV 81
Query: 182 DYLKHFRADSIVNDAEFIRVRLDPDAKPWTVLGQSYGGFCAVTYLSFAPQGLKQVLLTG 240
D +V D E +R L D W V G S+G A+ Y + Q++L G
Sbjct: 82 DNTTW----DLVADIERLRTHLGVDR--WQVFGGSWGSTLALAYAADPSAAGHQLVLRG 134
>sp|Q9JZR6|PIP_NEIMB Proline iminopeptidase OS=Neisseria meningitidis serogroup B
(strain MC58) GN=pip PE=3 SV=1
Length = 310
Score = 45.8 bits (107), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 57/123 (46%), Gaps = 29/123 (23%)
Query: 122 LLFLQGGPGF----ECRGPTESSGWINKACEEFRVVLMDQRGTGLSTPLSVSSMLQMKSA 177
++FL GGPG ECRG + N + FR+V++DQRG G S P + + + +
Sbjct: 34 VIFLHGGPGAGASPECRG------FFNP--DVFRIVIIDQRGCGRSRPYACA---EDNTT 82
Query: 178 KDLVDYLKHFRADSIVNDAEFIRVRLDPDAKPWTVLGQSYGGFCAVTYLSFAPQGLKQVL 237
DLV A+ +VR W V G S+G ++ Y P+ +K ++
Sbjct: 83 WDLV--------------ADIEKVREMLGIGKWLVFGGSWGSTLSLAYAQTHPERVKGLV 128
Query: 238 LTG 240
L G
Sbjct: 129 LRG 131
>sp|Q9JUV1|PIP_NEIMA Proline iminopeptidase OS=Neisseria meningitidis serogroup A /
serotype 4A (strain Z2491) GN=pip PE=3 SV=1
Length = 310
Score = 45.8 bits (107), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 57/123 (46%), Gaps = 29/123 (23%)
Query: 122 LLFLQGGPGF----ECRGPTESSGWINKACEEFRVVLMDQRGTGLSTPLSVSSMLQMKSA 177
++FL GGPG ECRG + N + FR+V++DQRG G S P + + + +
Sbjct: 34 VIFLHGGPGAGASPECRG------FFNP--DVFRIVIIDQRGCGRSRPYACA---EDNTT 82
Query: 178 KDLVDYLKHFRADSIVNDAEFIRVRLDPDAKPWTVLGQSYGGFCAVTYLSFAPQGLKQVL 237
DLV A+ +VR W V G S+G ++ Y P+ +K ++
Sbjct: 83 WDLV--------------ADIEKVREMLGIGKWLVFGGSWGSTLSLAYAQTHPERVKGLV 128
Query: 238 LTG 240
L G
Sbjct: 129 LRG 131
>sp|P42786|PIP_NEIGO Proline iminopeptidase OS=Neisseria gonorrhoeae GN=pip PE=1 SV=1
Length = 310
Score = 45.8 bits (107), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 57/123 (46%), Gaps = 29/123 (23%)
Query: 122 LLFLQGGPGF----ECRGPTESSGWINKACEEFRVVLMDQRGTGLSTPLSVSSMLQMKSA 177
++FL GGPG ECRG + N + FR+V++DQRG G S P + + + +
Sbjct: 34 VIFLHGGPGAGASPECRG------FFNP--DVFRIVIIDQRGCGRSHPYACA---EDNTT 82
Query: 178 KDLVDYLKHFRADSIVNDAEFIRVRLDPDAKPWTVLGQSYGGFCAVTYLSFAPQGLKQVL 237
DLV A+ +VR W V G S+G ++ Y P+ +K ++
Sbjct: 83 WDLV--------------ADIEKVREMLGIGKWLVFGGSWGSTLSLAYAQTHPERVKGLV 128
Query: 238 LTG 240
L G
Sbjct: 129 LRG 131
>sp|Q87DF8|PIP_XYLFT Proline iminopeptidase OS=Xylella fastidiosa (strain Temecula1 /
ATCC 700964) GN=pip PE=3 SV=1
Length = 313
Score = 44.3 bits (103), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 64/154 (41%), Gaps = 30/154 (19%)
Query: 96 RDVSPKISLFAREVVAVGK------EEQSLPY---LLFLQGGPGFECRGPTESSGWINKA 146
R + P+++ F ++ V E+ P+ ++ L GGPG C
Sbjct: 2 RTLYPEVTPFDHGMLCVDDSHRLYYEQCGNPHGKPVVILHGGPGGGCNDKMRRF----HD 57
Query: 147 CEEFRVVLMDQRGTGLSTPLSVSSMLQMKSAKDLVDYLKHFRADSIVNDAEFIRVRLDPD 206
+++R+VL DQRG G S P + L + DL V D E +RV L
Sbjct: 58 PDKYRIVLFDQRGAGRSMP---HANLTNNTTWDL------------VADIEKLRVAL--G 100
Query: 207 AKPWTVLGQSYGGFCAVTYLSFAPQGLKQVLLTG 240
W V G S+G A+ Y P+ +++L G
Sbjct: 101 ITRWQVFGGSWGSTLALAYAQTHPEQTTELVLRG 134
>sp|P47266|PIP_MYCGE Putative proline iminopeptidase OS=Mycoplasma genitalium (strain
ATCC 33530 / G-37 / NCTC 10195) GN=pip PE=3 SV=1
Length = 308
Score = 42.7 bits (99), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 50/117 (42%), Gaps = 21/117 (17%)
Query: 122 LLFLQGGPGFECRGPTESSGWINKACEEFRVVLMDQRGTGLSTPLSVSSMLQMKSAKDLV 181
+L++ GGPG T+ E ++L+DQRG G S
Sbjct: 32 VLYIHGGPG----SGTDEGCLKYFDLETTWIILLDQRGCGKSKT---------------N 72
Query: 182 DYLKHFRADSIVNDAEFIRVRLDPDAKPWTVLGQSYGGFCAVTYLSFAPQGLKQVLL 238
D D +V+D E +R +L+ K WT+ G S+G A+ Y PQ + ++ L
Sbjct: 73 DIFYENNTDKLVSDFEILRQKLN--IKNWTLFGGSWGSALALVYAIKHPQVVDKIFL 127
>sp|Q9S2L4|PIP_STRCO Probable proline iminopeptidase OS=Streptomyces coelicolor (strain
ATCC BAA-471 / A3(2) / M145) GN=SCO1989 PE=3 SV=1
Length = 323
Score = 42.7 bits (99), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 52/118 (44%), Gaps = 16/118 (13%)
Query: 123 LFLQGGPGFECRGPTESSGWINKACEEFRVVLMDQRGTGLSTPLSVSSMLQMKSAKDLVD 182
+ L GGPG R + + A +R+VL+DQRG G S P + + M V+
Sbjct: 37 VVLHGGPG--SRASPGLRRYFDPAA--YRIVLLDQRGAGRSLPRASAPDTDMS-----VN 87
Query: 183 YLKHFRADSIVNDAEFIRVRLDPDAKPWTVLGQSYGGFCAVTYLSFAPQGLKQVLLTG 240
H AD R+R+ + W V G S+G + Y P + +++LTG
Sbjct: 88 TTAHLMAD-------LERLRVHLGIERWLVWGVSWGSVLGLRYAQTHPGVVTELVLTG 138
>sp|P75092|PIP_MYCPN Putative proline iminopeptidase OS=Mycoplasma pneumoniae (strain
ATCC 29342 / M129) GN=pip PE=3 SV=1
Length = 309
Score = 41.2 bits (95), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 50/116 (43%), Gaps = 21/116 (18%)
Query: 123 LFLQGGPGFECRGPTESSGWINKACEEFRVVLMDQRGTGLSTPLSVSSMLQMKSAKDLVD 182
L++ GGPG T++ + V+L+DQRG G S V+
Sbjct: 33 LYVHGGPG----SGTDAGCLKYFDLDTTYVILLDQRGCGQSKA---------------VN 73
Query: 183 YLKHFRADSIVNDAEFIRVRLDPDAKPWTVLGQSYGGFCAVTYLSFAPQGLKQVLL 238
L H +V D E +R L + WT+ G S+G A+ Y PQ ++QV L
Sbjct: 74 PLLHNTTQDLVGDLEALRQHLKLER--WTLFGGSWGSTLALVYAITHPQVVEQVFL 127
>sp|P35866|Y967_CORGL Uncharacterized protein Cgl0967/cg1104 OS=Corynebacterium
glutamicum (strain ATCC 13032 / DSM 20300 / JCM 1318 /
LMG 3730 / NCIMB 10025) GN=Cgl0967 PE=4 SV=1
Length = 426
Score = 40.4 bits (93), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 62/144 (43%), Gaps = 33/144 (22%)
Query: 119 LPYLLFLQGGPGFECRGPTE--SSGWINKACEEFR---------VVLMDQRGTGLSTPLS 167
LP L+ + G PG P + SSG ++ + F+ V+ +D G+ P
Sbjct: 196 LPVLVLMPGNPG----QPDQWFSSGNADQTADNFQATHDGISPIVISVDGTGSFSGNPAC 251
Query: 168 VSSMLQMKSAKDLVDYLKHFRADSIVNDAEFI---RVRLDPDAKPWTVLGQSYGGFCAVT 224
V S A+ ++ YL H D + + R++ D + WT+ G SYGG CA+
Sbjct: 252 VDS-----DAQSVMTYLSH--------DVPMLIKQKFRVNQDQRTWTIGGLSYGGTCALQ 298
Query: 225 YLSFAPQGLKQVLLTGGT--PPLG 246
++ P+ L G P LG
Sbjct: 299 IMTNHPEAYGSFLDFSGQEEPTLG 322
>sp|C7TMK0|PIP_LACRL Proline iminopeptidase OS=Lactobacillus rhamnosus (strain Lc 705)
GN=pip PE=3 SV=1
Length = 291
Score = 39.3 bits (90), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 53/125 (42%), Gaps = 33/125 (26%)
Query: 123 LFLQGGPG-----FECRGPTESSGWINKACEEFRVVLMDQRGTGLST-PLSVSSMLQMKS 176
L + GGPG FE +G ++++ DQ G G S+ P ++
Sbjct: 30 LLIHGGPGSSHNYFELMDDYAETG--------RQLIMYDQVGCGKSSLPEDPGVYVKETW 81
Query: 177 AKDLVDYLKHFRADSIVNDAEFIRVRLDPDAKPWTVLGQSYGGFCAVTYL-SFAPQGLKQ 235
A++LV K D + +LGQS+GG + YL SF PQG+K
Sbjct: 82 AEELVALRKFLHLDEL------------------HMLGQSWGGMLEMYYLTSFDPQGIKS 123
Query: 236 VLLTG 240
V++ G
Sbjct: 124 VMIDG 128
>sp|P46544|PIP_LACDE Proline iminopeptidase OS=Lactobacillus delbrueckii subsp.
bulgaricus GN=pepIP PE=1 SV=2
Length = 295
Score = 38.5 bits (88), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 63/135 (46%), Gaps = 31/135 (22%)
Query: 112 VGKEEQSLPYLLFLQGGPG-----FECRGPT-ESSGWINKACEEFRVVLMDQRGTGLSTP 165
VG+ P LL L GGPG FE E SG +V++ DQ G G S+
Sbjct: 21 VGEATDRAP-LLLLHGGPGSSHNYFEVLDQVAEKSG--------RQVIMYDQLGCGNSSI 71
Query: 166 LSVSSMLQMKSAKDLVDYLKHFRADSIVNDAEFIRVRLDPDAKPWTVLGQSYGGFCAVTY 225
Q ++A + A + V + E +R +L D +LGQS+GG A+ Y
Sbjct: 72 PDD----QAETA---------YTAQTWVKELENVREQLGLDQI--HLLGQSWGGMLALIY 116
Query: 226 L-SFAPQGLKQVLLT 239
L + P+G+K ++L+
Sbjct: 117 LCDYQPEGVKSLILS 131
>sp|Q1G8L9|PIP_LACDA Proline iminopeptidase OS=Lactobacillus delbrueckii subsp.
bulgaricus (strain ATCC 11842 / DSM 20081) GN=pepIP PE=3
SV=1
Length = 295
Score = 38.5 bits (88), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 63/135 (46%), Gaps = 31/135 (22%)
Query: 112 VGKEEQSLPYLLFLQGGPG-----FECRGPT-ESSGWINKACEEFRVVLMDQRGTGLSTP 165
VG+ P LL L GGPG FE E SG +V++ DQ G G S+
Sbjct: 21 VGEATDRAP-LLLLHGGPGSSHNYFEVLDQVAEKSG--------RQVIMYDQLGCGNSSI 71
Query: 166 LSVSSMLQMKSAKDLVDYLKHFRADSIVNDAEFIRVRLDPDAKPWTVLGQSYGGFCAVTY 225
Q ++A + A + V + E +R +L D +LGQS+GG A+ Y
Sbjct: 72 PDD----QAETA---------YTAQTWVKELENVREQLGLDQI--HLLGQSWGGMLALIY 116
Query: 226 L-SFAPQGLKQVLLT 239
L + P+G+K ++L+
Sbjct: 117 LCDYQPEGVKSLILS 131
>sp|O83041|PIP_PLEBO Probable proline iminopeptidase OS=Plectonema boryanum GN=pip PE=3
SV=1
Length = 321
Score = 38.5 bits (88), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 43/92 (46%), Gaps = 17/92 (18%)
Query: 149 EFRVVLMDQRGTGLSTPLSVSSMLQMKSAKDLVDYLKHFRADSIVNDAEFIRVRLDPDAK 208
++R++L DQRG G STP + L+ + DL V+D E +R L+ D
Sbjct: 60 KWRIILFDQRGAGKSTP---HAELRENTTWDL------------VSDIEKLRSHLNIDR- 103
Query: 209 PWTVLGQSYGGFCAVTYLSFAPQGLKQVLLTG 240
W V G S+G ++ Y P ++L G
Sbjct: 104 -WFVFGGSWGSTLSLAYSQTHPDRCLGLILRG 134
>sp|P46542|PIP_LACDL Proline iminopeptidase OS=Lactobacillus delbrueckii subsp. lactis
GN=pip PE=1 SV=1
Length = 294
Score = 38.1 bits (87), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 63/135 (46%), Gaps = 31/135 (22%)
Query: 112 VGKEEQSLPYLLFLQGGPG-----FECRGPT-ESSGWINKACEEFRVVLMDQRGTGLSTP 165
VG+ P LL L GGPG FE E SG +V++ DQ G G S+
Sbjct: 20 VGEATDRAP-LLLLHGGPGSSHNYFEVLDQVAEKSG--------RQVIMYDQLGCGNSSI 70
Query: 166 LSVSSMLQMKSAKDLVDYLKHFRADSIVNDAEFIRVRLDPDAKPWTVLGQSYGGFCAVTY 225
Q ++A + A + V + E +R +L D +LGQS+GG A+ Y
Sbjct: 71 PDD----QAETA---------YTAQTWVKELENVREQLGLDQI--HLLGQSWGGMLALIY 115
Query: 226 L-SFAPQGLKQVLLT 239
L + P+G+K ++L+
Sbjct: 116 LCDYQPKGVKSLILS 130
>sp|Q184M8|PIP_CLOD6 Proline iminopeptidase OS=Clostridium difficile (strain 630) GN=pip
PE=3 SV=1
Length = 293
Score = 38.1 bits (87), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 58/136 (42%), Gaps = 35/136 (25%)
Query: 112 VGKEEQSLPYLLFLQGGPG-----FECRGPTESSGWINKACEEFRVVLM-DQRGTGLSTP 165
VG+ + L+ L GGPG FE ++K E R V+M DQ G G S
Sbjct: 20 VGENTEGKKPLVLLHGGPGSTHNYFEV---------LDKIAESGRQVIMYDQIGCGNSFV 70
Query: 166 LSVSSMLQMKS-AKDLVDYLKHFRADSIVNDAEFIRVRLDPDAKPWTVLGQSYGGFCAVT 224
+ + ++L++ KH D I +LGQS+GG A+
Sbjct: 71 EGHPELFNADTWIEELIELRKHLGLDEI------------------HLLGQSWGGMQAIW 112
Query: 225 Y-LSFAPQGLKQVLLT 239
Y + + P+G+K +L+
Sbjct: 113 YAIEYKPKGIKSYILS 128
>sp|Q890D8|PIP_LACPL Proline iminopeptidase OS=Lactobacillus plantarum (strain ATCC
BAA-793 / NCIMB 8826 / WCFS1) GN=pip PE=3 SV=2
Length = 287
Score = 38.1 bits (87), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 62/135 (45%), Gaps = 34/135 (25%)
Query: 112 VGKEEQSLPYLLFLQGGPG-----FECRGPTESSGWINKACEEFR-VVLMDQRGTGLSTP 165
VG + + L+ L GGPG FE G+ + A + R +V+ DQ G G S+
Sbjct: 13 VGDRQSNKTPLVLLHGGPGSTHNYFE--------GFDDLAAQTGRPIVMYDQLGCGRSS- 63
Query: 166 LSVSSMLQMKSAKDLVDYLKHFRADSIVNDAEFIRVRLD-PDAKPWTVLGQSYGGFCAVT 224
+ D + ++A V + +R LD P+ +LGQS+GG A+
Sbjct: 64 --------------IPDDDQLWQAAMWVAELRALRTYLDLPEIH---LLGQSWGGMLAII 106
Query: 225 Y-LSFAPQGLKQVLL 238
Y + PQG+K ++L
Sbjct: 107 YGCDYRPQGIKSLIL 121
>sp|O32449|PIP_SERMA Proline iminopeptidase OS=Serratia marcescens GN=pip PE=1 SV=1
Length = 317
Score = 37.7 bits (86), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 49/118 (41%), Gaps = 21/118 (17%)
Query: 123 LFLQGGPGFECRGPTESSGWINKACEEFRVVLMDQRGTGLSTPLSVSSMLQMKSAKDLVD 182
+F+ GGPG G E ++V+L DQRG G S P + L + LV
Sbjct: 41 VFIHGGPG----GGISPHHRQLFDPERYKVLLFDQRGCGRSRP---HASLDNNTTWHLV- 92
Query: 183 YLKHFRADSIVNDAEFIRVRLDPDAKPWTVLGQSYGGFCAVTYLSFAPQGLKQVLLTG 240
A+ R+R + W V G S+G A+ Y P+ + +++L G
Sbjct: 93 -------------ADIERLREMAGVEQWLVFGGSWGSTLALAYAQTHPERVSEMVLRG 137
>sp|P34211|YUAR_ECOLI Putative hydrolase YuaR OS=Escherichia coli (strain K12) GN=yuaR
PE=3 SV=3
Length = 499
Score = 37.7 bits (86), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 76/194 (39%), Gaps = 31/194 (15%)
Query: 71 GKWYSVPDLRLRDHRFTVPLDYA-LDRDVS----PKISLFAREVVAVGKEEQSLPYLLFL 125
GK S P+L +VPL Y +DVS P + L ++ A K + S+ + +
Sbjct: 45 GKESSSPELLC--GYLSVPLKYTDTGKDVSDENIPLVRLAMTKLPAKSKRKGSV---III 99
Query: 126 QGGPGFECRGPTESSGW-INKACEEFRVVLMDQRGTGLSTPL-----SVSSMLQMKSAKD 179
GGPG P + W + E + ++ D RG G S P S L S K
Sbjct: 100 SGGPGLPGINPYINFDWPVTNLRESWDIIGFDPRGVGQSFPAINCQQSNQERLVNVSEKQ 159
Query: 180 LV-------------DYLKHFRADSIVNDAEFIRVRLDPDAKPWTVLGQSYGGFCAVTYL 226
L+ + ++H + V D E IR L K T + SYG A Y
Sbjct: 160 LILQKINACIHNTGAEVIRHIGSHEAVYDIERIRQALGD--KQLTAVAYSYGTQIAALYA 217
Query: 227 SFAPQGLKQVLLTG 240
P ++ ++ G
Sbjct: 218 ERFPSSIRSIVFDG 231
>sp|P70981|YBAC_BACSU Probable aminopeptidase YbaC OS=Bacillus subtilis (strain 168)
GN=ybaC PE=3 SV=2
Length = 318
Score = 37.0 bits (84), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 65/163 (39%), Gaps = 45/163 (27%)
Query: 98 VSPKISLFAREVVAVGKEEQSL---------PYLLFLQGGPGFECRGPTESSGWINKACE 148
+ K S+ + +++G +Q L P LLFL GGPG T G++ +
Sbjct: 2 IPEKKSIAIMKELSIGNTKQMLMINGVDVKNPLLLFLHGGPG------TPQIGYVRHYQK 55
Query: 149 E----FRVVLMDQRGTGLSTPLSVSSMLQMKSAKDLVDYLKHFRADSIVND----AEFIR 200
E F VV DQRG+GLS +S + HF D+I A F +
Sbjct: 56 ELEQYFTVVHWDQRGSGLSYSKRISHHSMT---------INHFIKDTIQVTQWLLAHFSK 106
Query: 201 VRLDPDAKPWTVLGQSYGGFCAVTYLSFAPQ------GLKQVL 237
+L + G S+G A+ L P G+ QV+
Sbjct: 107 SKL-------YLAGHSWGSILALHVLQQRPDLFYTYYGISQVV 142
>sp|P53219|IMO32_YEAST Abhydrolase domain-containing protein IMO32 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=IMO32 PE=1
SV=1
Length = 342
Score = 35.8 bits (81), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 57/239 (23%), Positives = 95/239 (39%), Gaps = 36/239 (15%)
Query: 88 VPLDYALDRDVSPKISLFAREVVAVGKEEQSLPYLLFLQGGPGFECRGPTESSGWINKAC 147
VPLD + D + R+ V G E + P ++ L G G + + K
Sbjct: 51 VPLDLSYD--------IIKRDAVKTGDEGKPRPPIIILHGLFGNKLNNRSIGRNLNKKLG 102
Query: 148 EEFRVVLMDQRGTGLSTPLSVSSMLQMKSAKDLVDYLKHFRADSIVNDAEFIRVRLDPDA 207
+ V L+D R G S SV + M + +KHF + L+ +
Sbjct: 103 RD--VYLLDLRNHGSSPHSSVHNYEVMS------EDVKHF----------ITKHELNTNG 144
Query: 208 KPWTVLGQSYGGFCAVTYLSFAPQGLKQVLLTGGTPPLGNGCSADSV-YRVAFEQVIRQN 266
P ++G S GG A+ + PQ L +L+ P+ +A+ V Y A +++
Sbjct: 145 GP-IIIGHSMGGKVAMMLVLKNPQ-LCSMLVCIENAPVSLRPNAEFVEYIKALMEIVNDK 202
Query: 267 EKYYKRFPQDVEIVREIVKHLAESEGGGVLLPSGGILTPRVLQLVGLSALGSSTGFERL 325
K + Q E HLAE GG L+ + + +++ S++ S T ER+
Sbjct: 203 GKTIRTLKQADE-------HLAERIGGNELVRRFLLTALKKVKMDNSSSVSSYTFEERI 254
>sp|P52278|PIP_LACHE Proline iminopeptidase OS=Lactobacillus helveticus GN=pip PE=1 SV=1
Length = 294
Score = 34.3 bits (77), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 56/127 (44%), Gaps = 31/127 (24%)
Query: 115 EEQSLPYLLFLQGGPGFECRGPTESSGWINKACEEF------RVVLMDQRGTGLSTPLSV 168
E P L+ L GGPG SS + +E R+++ DQ G G S
Sbjct: 22 ERSEKPPLVLLHGGPG--------SSHNYFEVLDELAQKDGRRIIMYDQLGCGES----- 68
Query: 169 SSMLQMKSAKDLVDYLKHFRADSIVNDAEFIRVRLDPDAKPWTVLGQSYGGFCAVTYL-S 227
S D D+ + + ++ V + E +R L + +LGQS+GG A+ Y+
Sbjct: 69 -------SIPD--DHPELYTKETWVKELEALREHLA--LRKMHLLGQSWGGMLAIIYMCD 117
Query: 228 FAPQGLK 234
+ P+G++
Sbjct: 118 YHPEGIQ 124
>sp|A8YWL3|PIP_LACH4 Proline iminopeptidase OS=Lactobacillus helveticus (strain DPC
4571) GN=pip PE=3 SV=1
Length = 294
Score = 34.3 bits (77), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 56/127 (44%), Gaps = 31/127 (24%)
Query: 115 EEQSLPYLLFLQGGPGFECRGPTESSGWINKACEEF------RVVLMDQRGTGLSTPLSV 168
E P L+ L GGPG SS + +E R+++ DQ G G S
Sbjct: 22 ERSEKPPLVLLHGGPG--------SSHNYFEVLDELAQKDGRRIIMYDQLGCGES----- 68
Query: 169 SSMLQMKSAKDLVDYLKHFRADSIVNDAEFIRVRLDPDAKPWTVLGQSYGGFCAVTYL-S 227
S D D+ + + ++ V + E +R L + +LGQS+GG A+ Y+
Sbjct: 69 -------SIPD--DHPELYTKETWVKELEALREHLA--LRKMHLLGQSWGGMLAIIYMCD 117
Query: 228 FAPQGLK 234
+ P+G++
Sbjct: 118 YHPEGIQ 124
>sp|A5FIF5|PIP_FLAJ1 Proline iminopeptidase OS=Flavobacterium johnsoniae (strain ATCC
17061 / DSM 2064 / UW101) GN=fpaP PE=3 SV=2
Length = 297
Score = 34.3 bits (77), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 16/51 (31%), Positives = 28/51 (54%)
Query: 190 DSIVNDAEFIRVRLDPDAKPWTVLGQSYGGFCAVTYLSFAPQGLKQVLLTG 240
D V++ E +R ++ D + VLG S+GG A+ Y Q +K +L++
Sbjct: 77 DRFVDEVEQVRKAINADKDNFYVLGNSWGGILAMEYALKYQQNMKGLLVSN 127
>sp|Q13QH4|MHPC_BURXL 2-hydroxy-6-oxononadienedioate/2-hydroxy-6-oxononatrienedioate
hydrolase OS=Burkholderia xenovorans (strain LB400)
GN=mhpC PE=3 SV=1
Length = 289
Score = 33.5 bits (75), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 54/136 (39%), Gaps = 40/136 (29%)
Query: 117 QSLPYLLFLQG-GPGFECRGPTESSGWIN-------KACEEFRVVLMDQRGTGLSTPLSV 168
Q ++ L G GPG +SGW N +RV+L+D G S P+
Sbjct: 35 QGAETVVMLHGSGPG--------ASGWANFNRNVEPLVAAGYRVILLDCLGWSKSDPVVC 86
Query: 169 S---SMLQMKSAKDLVDYLKHFRADSIVNDAEFIRVRLDPDAKPWTVLGQSYGGFCAVTY 225
S L +S K L+D L D E + + +G S GG AV +
Sbjct: 87 DGSRSELNARSLKGLLDAL----------DIERVHI-----------IGNSMGGHSAVAF 125
Query: 226 LSFAPQGLKQVLLTGG 241
PQ + +++L GG
Sbjct: 126 ALANPQRVGKLVLMGG 141
>sp|O05420|PIP_FLAME Proline iminopeptidase OS=Flavobacterium meningosepticum GN=fpaP
PE=1 SV=1
Length = 298
Score = 33.5 bits (75), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 29/56 (51%)
Query: 185 KHFRADSIVNDAEFIRVRLDPDAKPWTVLGQSYGGFCAVTYLSFAPQGLKQVLLTG 240
K + D V++ E +R + D + + VLG S+GG A+ Y Q LK +++
Sbjct: 72 KLWNIDRFVDEVEQVRKAIHADKENFYVLGNSWGGILAMEYALKYQQNLKGLIVAN 127
>sp|E9CUF4|DAPB_COCPS Probable dipeptidyl-aminopeptidase B OS=Coccidioides posadasii
(strain RMSCC 757 / Silveira) GN=DAPB PE=3 SV=1
Length = 917
Score = 33.1 bits (74), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 39/160 (24%), Positives = 60/160 (37%), Gaps = 15/160 (9%)
Query: 116 EQSLPYLLFLQGGPGFECRGPTESSGWINKACEE--FRVVLMDQRGTGLSTPLSVSSMLQ 173
++ P L L GGPG + + + + VV +D RGTG +
Sbjct: 661 DKKYPVLFHLYGGPGSQTVTKKFKVDFQSYVASNLGYIVVTVDGRGTGF---------IG 711
Query: 174 MKSAKDLVDYLKHFRADSIVNDAEFIRVRLDPDAKPWTVLGQSYGGFCAVTYLSFAPQGL 233
K+ + L H+ A + A+ R DA + G SYGGF + L Q
Sbjct: 712 RKARCAVRGNLGHYEAIDQIETAKAWGKRSYVDAGRMAIWGWSYGGFMTLKTLE---QDA 768
Query: 234 KQVLLTG-GTPPLGNGCSADSVYRVAFEQVIRQNEKYYKR 272
Q G P+ + DS+Y + + N + Y R
Sbjct: 769 GQTFQYGMAVAPVTDWRFYDSIYTERYMHTPQNNPEGYDR 808
>sp|C5P334|DAPB_COCP7 Probable dipeptidyl-aminopeptidase B OS=Coccidioides posadasii
(strain C735) GN=DAPB PE=3 SV=1
Length = 917
Score = 33.1 bits (74), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 39/160 (24%), Positives = 60/160 (37%), Gaps = 15/160 (9%)
Query: 116 EQSLPYLLFLQGGPGFECRGPTESSGWINKACEE--FRVVLMDQRGTGLSTPLSVSSMLQ 173
++ P L L GGPG + + + + VV +D RGTG +
Sbjct: 661 DKKYPVLFHLYGGPGSQTVTKKFKVDFQSYVASNLGYIVVTVDGRGTGF---------IG 711
Query: 174 MKSAKDLVDYLKHFRADSIVNDAEFIRVRLDPDAKPWTVLGQSYGGFCAVTYLSFAPQGL 233
K+ + L H+ A + A+ R DA + G SYGGF + L Q
Sbjct: 712 RKARCAVRGNLGHYEAIDQIETAKAWGKRSYVDAGRMAIWGWSYGGFMTLKTLE---QDA 768
Query: 234 KQVLLTG-GTPPLGNGCSADSVYRVAFEQVIRQNEKYYKR 272
Q G P+ + DS+Y + + N + Y R
Sbjct: 769 GQTFQYGMAVAPVTDWRFYDSIYTERYMHTPQNNPEGYDR 808
>sp|Q5FMT1|PIP_LACAC Proline iminopeptidase OS=Lactobacillus acidophilus (strain ATCC
700396 / NCK56 / N2 / NCFM) GN=pip PE=3 SV=1
Length = 293
Score = 33.1 bits (74), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 58/129 (44%), Gaps = 30/129 (23%)
Query: 112 VGKEEQSLPYLLFLQGGPG-----FECRGPTESSGWINKACEEFRVVLMDQRGTGLSTPL 166
VG+ + P L+ L GGPG FE ++ R+++ DQ G G S
Sbjct: 20 VGRRSEKSP-LVLLHGGPGSTHNYFEVLDKLAK-------IDDRRIIMYDQLGCGNS--- 68
Query: 167 SVSSMLQMKSAKDLVDYLKHFRADSIVNDAEFIRVRLDPDAKPWTVLGQSYGGFCAVTYL 226
S D D+ + + ++ V + + +R L + +LGQS+GG A+ Y+
Sbjct: 69 ---------SIPD--DHPELYTKETWVKELKTLREHLA--LRKIHLLGQSWGGMLAIIYM 115
Query: 227 -SFAPQGLK 234
+ P+G++
Sbjct: 116 CDYHPEGIQ 124
>sp|Q9KJH8|PHAG_PSEOL (R)-3-hydroxydecanoyl-ACP:CoA transacylase OS=Pseudomonas
oleovorans GN=phaG PE=3 SV=1
Length = 295
Score = 33.1 bits (74), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 25/100 (25%), Positives = 44/100 (44%), Gaps = 22/100 (22%)
Query: 149 EFRVVLMDQRGTGLSTPLSVSSMLQMKS--AKDLVDYLKHFRADSIVNDAEFIRVRLDPD 206
+F VVL DQ G S P + K A L++ ++HF+AD
Sbjct: 53 QFNVVLFDQPYAGKSKPHNRQERFISKETEAHILLELIEHFQADH--------------- 97
Query: 207 AKPWTVLGQSYGGFCAVTYLSFAPQGLKQVLLTGGTPPLG 246
V+ S+GG + L+ P+G+K+ +++ +P +
Sbjct: 98 -----VMSFSWGGASTLLALAHQPRGVKKAVVSSFSPVIN 132
>sp|A7EQZ1|DAPB_SCLS1 Probable dipeptidyl-aminopeptidase B OS=Sclerotinia sclerotiorum
(strain ATCC 18683 / 1980 / Ss-1) GN=dapB PE=3 SV=1
Length = 921
Score = 32.7 bits (73), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 27/113 (23%), Positives = 47/113 (41%), Gaps = 11/113 (9%)
Query: 116 EQSLPYLLFLQGGPGFECRGPTESSGWINKACEE--FRVVLMDQRGTGLSTPLSVSSMLQ 173
++ P L +L GGPG + + + + + + VV +D RGTG +
Sbjct: 675 KKKYPVLFYLYGGPGSQTVSKSFNVDFESYIASNLGYIVVTVDGRGTGF---------IG 725
Query: 174 MKSAKDLVDYLKHFRADSIVNDAEFIRVRLDPDAKPWTVLGQSYGGFCAVTYL 226
K+ + + H+ A + A+ + DA + G SYGGF + L
Sbjct: 726 RKARTIIRGNIGHYEARDQIETAKIWASKKYVDASRMAIWGWSYGGFMTLKTL 778
>sp|P46541|PIP_BACCO Proline iminopeptidase OS=Bacillus coagulans GN=pip PE=1 SV=2
Length = 288
Score = 32.7 bits (73), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 49/118 (41%), Gaps = 21/118 (17%)
Query: 122 LLFLQGGPGFECRGPTESSGWINKACEEFRVVLMDQRGTGLSTPLSVSSMLQMKSAKDLV 181
++ L GGPG C S + ++ V+L DQ G G KS + +
Sbjct: 28 VIVLHGGPGSSCY----SLLGLKALAKDRPVILYDQLGCG-------------KSDRPMD 70
Query: 182 DYLKHFRADSIVNDAEFIRVRLDPDAKPWTVLGQSYGGFCAVTYLSFAPQGLKQVLLT 239
L +R D V + IR L+ D +LG S+G A Y P G+K V+ +
Sbjct: 71 TTL--WRLDRFVEELAQIRQALNLDEV--HILGHSWGTTLAAAYCLTKPSGVKSVIFS 124
>sp|Q0P5G4|KAT3_BOVIN Kynurenine--oxoglutarate transaminase 3 OS=Bos taurus GN=CCBL2 PE=2
SV=1
Length = 455
Score = 32.7 bits (73), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 17/61 (27%), Positives = 29/61 (47%)
Query: 267 EKYYKRFPQDVEIVREIVKHLAESEGGGVLLPSGGILTPRVLQLVGLSALGSSTGFERLH 326
E Y+ P+++E+ R+ + HL ES G ++P GG + L+ + L E
Sbjct: 336 ECYFNSLPKELEVKRDRMVHLLESVGLKSIVPDGGYFIIADVSLLDVDLLDMKDSNEPYD 395
Query: 327 Y 327
Y
Sbjct: 396 Y 396
>sp|C4JHY5|DAPB_UNCRE Probable dipeptidyl-aminopeptidase B OS=Uncinocarpus reesii (strain
UAMH 1704) GN=DAPB PE=3 SV=1
Length = 914
Score = 32.3 bits (72), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 47/114 (41%), Gaps = 13/114 (11%)
Query: 116 EQSLPYLLFLQGGPGFEC---RGPTESSGWINKACEEFRVVLMDQRGTGLSTPLSVSSML 172
++ P L L GGPG + R + ++ + VV +D RGTG +
Sbjct: 658 DKKYPVLFHLYGGPGSQTVSKRFKVDFQSYVASNLG-YIVVTVDGRGTGF---------I 707
Query: 173 QMKSAKDLVDYLKHFRADSIVNDAEFIRVRLDPDAKPWTVLGQSYGGFCAVTYL 226
K+ + D L H+ A + A+ R DA + G SYGGF + L
Sbjct: 708 GRKARCVVRDNLGHYEAIDQIETAKAWGKRPYVDATRMAIWGWSYGGFMTLKTL 761
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.137 0.414
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 164,243,349
Number of Sequences: 539616
Number of extensions: 7168242
Number of successful extensions: 16565
Number of sequences better than 100.0: 40
Number of HSP's better than 100.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 35
Number of HSP's that attempted gapping in prelim test: 16537
Number of HSP's gapped (non-prelim): 40
length of query: 424
length of database: 191,569,459
effective HSP length: 120
effective length of query: 304
effective length of database: 126,815,539
effective search space: 38551923856
effective search space used: 38551923856
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 63 (28.9 bits)