Query 014462
Match_columns 424
No_of_seqs 266 out of 2065
Neff 7.9
Searched_HMMs 46136
Date Fri Mar 29 05:21:54 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/014462.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/014462hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PTZ00207 hypothetical protein; 100.0 4.5E-49 9.7E-54 413.0 26.2 346 3-415 180-562 (591)
2 PRK11273 glpT sn-glycerol-3-ph 99.6 3E-13 6.6E-18 139.6 28.6 194 190-418 249-448 (452)
3 PRK11663 regulatory protein Uh 99.6 3.7E-13 8E-18 138.3 25.1 186 190-408 239-427 (434)
4 TIGR00893 2A0114 d-galactonate 99.6 8.6E-13 1.9E-17 130.9 26.4 188 184-403 205-397 (399)
5 PRK09556 uhpT sugar phosphate 99.6 2.1E-13 4.6E-18 141.4 22.1 191 190-405 254-449 (467)
6 TIGR01299 synapt_SV2 synaptic 99.6 9.3E-13 2E-17 142.9 27.7 137 233-410 601-738 (742)
7 TIGR00890 2A0111 Oxalate/Forma 99.6 7.6E-14 1.6E-18 138.2 17.3 174 186-398 197-375 (377)
8 COG2814 AraJ Arabinose efflux 99.6 2E-13 4.4E-18 136.5 18.7 174 194-406 13-189 (394)
9 PRK10504 putative transporter; 99.5 3.8E-13 8.2E-18 139.2 19.8 176 193-407 9-187 (471)
10 PRK09705 cynX putative cyanate 99.5 5.3E-12 1.1E-16 128.0 26.8 183 190-410 201-386 (393)
11 KOG2504 Monocarboxylate transp 99.5 4.1E-13 8.9E-18 140.3 18.8 182 188-405 292-476 (509)
12 TIGR00711 efflux_EmrB drug res 99.5 3.7E-12 8E-17 131.8 25.5 154 189-349 250-411 (485)
13 PRK14995 methyl viologen resis 99.5 6.8E-12 1.5E-16 131.2 27.5 152 190-348 255-413 (495)
14 PRK11663 regulatory protein Uh 99.5 8.9E-13 1.9E-17 135.4 20.2 171 194-403 23-196 (434)
15 TIGR00892 2A0113 monocarboxyla 99.5 4.1E-13 8.9E-18 139.0 17.4 201 189-423 236-444 (455)
16 PRK11551 putative 3-hydroxyphe 99.5 4.8E-12 1E-16 128.1 23.8 171 197-405 223-396 (406)
17 TIGR00900 2A0121 H+ Antiporter 99.5 8E-13 1.7E-17 130.5 17.6 170 197-405 2-179 (365)
18 TIGR00712 glpT glycerol-3-phos 99.5 4.7E-12 1E-16 130.2 23.7 186 190-410 247-438 (438)
19 COG2271 UhpC Sugar phosphate p 99.5 2.1E-12 4.6E-17 128.4 20.1 190 190-415 248-444 (448)
20 PRK03545 putative arabinose tr 99.5 1.5E-12 3.2E-17 131.6 19.3 170 196-404 11-183 (390)
21 PRK10213 nepI ribonucleoside t 99.5 2.1E-12 4.5E-17 131.1 20.1 151 211-400 37-190 (394)
22 PF07690 MFS_1: Major Facilita 99.5 4.6E-13 1E-17 131.7 14.2 164 201-403 3-170 (352)
23 TIGR00710 efflux_Bcr_CflA drug 99.5 2.1E-12 4.6E-17 129.0 19.2 156 211-405 22-180 (385)
24 TIGR02332 HpaX 4-hydroxyphenyl 99.5 1.9E-12 4.1E-17 132.2 19.1 177 197-406 11-190 (412)
25 COG2223 NarK Nitrate/nitrite t 99.5 6.8E-13 1.5E-17 131.9 15.2 186 185-409 209-405 (417)
26 PRK10091 MFS transport protein 99.5 1.9E-12 4.1E-17 130.6 18.8 171 194-403 3-176 (382)
27 PRK10054 putative transporter; 99.5 2.9E-12 6.4E-17 130.1 19.9 173 193-405 6-182 (395)
28 PRK05122 major facilitator sup 99.5 4.2E-12 9.2E-17 128.3 19.9 160 211-409 233-393 (399)
29 PF06813 Nodulin-like: Nodulin 99.5 2.5E-13 5.3E-18 128.9 9.7 95 1-95 154-250 (250)
30 TIGR00902 2A0127 phenyl propri 99.5 4.1E-11 8.8E-16 120.9 26.5 156 187-350 198-357 (382)
31 TIGR00879 SP MFS transporter, 99.5 7.1E-12 1.5E-16 127.9 21.3 177 194-409 284-474 (481)
32 TIGR00898 2A0119 cation transp 99.5 1.5E-11 3.3E-16 128.4 24.1 179 184-404 313-494 (505)
33 PRK15403 multidrug efflux syst 99.4 6.6E-12 1.4E-16 128.3 20.5 157 210-405 32-191 (413)
34 TIGR00889 2A0110 nucleoside tr 99.4 3.1E-12 6.8E-17 131.0 18.1 190 187-409 201-406 (418)
35 TIGR00893 2A0114 d-galactonate 99.4 1.3E-12 2.8E-17 129.7 14.9 157 210-405 10-169 (399)
36 TIGR00711 efflux_EmrB drug res 99.4 2.1E-12 4.6E-17 133.6 16.7 169 199-406 7-178 (485)
37 PRK14995 methyl viologen resis 99.4 5.9E-12 1.3E-16 131.7 20.0 171 197-406 9-183 (495)
38 TIGR00887 2A0109 phosphate:H+ 99.4 3.7E-12 8E-17 133.3 18.3 173 208-410 302-493 (502)
39 TIGR01299 synapt_SV2 synaptic 99.4 4.8E-12 1E-16 137.4 19.4 185 192-402 161-352 (742)
40 PRK12382 putative transporter; 99.4 1.5E-11 3.3E-16 124.1 21.8 154 212-404 234-388 (392)
41 TIGR00894 2A0114euk Na(+)-depe 99.4 2.6E-11 5.7E-16 125.4 24.1 193 185-408 252-453 (465)
42 PRK10473 multidrug efflux syst 99.4 8.7E-12 1.9E-16 125.9 19.8 169 200-407 9-180 (392)
43 TIGR00924 yjdL_sub1_fam amino 99.4 3.3E-12 7.2E-17 133.0 17.2 169 195-402 11-189 (475)
44 PRK10504 putative transporter; 99.4 7E-11 1.5E-15 122.2 27.0 154 190-350 257-417 (471)
45 PRK09952 shikimate transporter 99.4 1.1E-10 2.4E-15 120.2 28.2 178 190-404 245-432 (438)
46 PRK03699 putative transporter; 99.4 1.2E-11 2.7E-16 125.2 20.8 178 193-410 204-385 (394)
47 COG2271 UhpC Sugar phosphate p 99.4 2.4E-12 5.1E-17 128.1 14.7 171 197-406 28-207 (448)
48 TIGR00897 2A0118 polyol permea 99.4 1.6E-11 3.4E-16 124.8 21.3 181 188-405 216-401 (402)
49 PRK09584 tppB putative tripept 99.4 8.1E-12 1.7E-16 130.9 19.5 173 190-401 16-197 (500)
50 TIGR00890 2A0111 Oxalate/Forma 99.4 6.9E-12 1.5E-16 124.2 17.3 163 203-405 12-177 (377)
51 PRK03633 putative MFS family t 99.4 1.8E-11 3.9E-16 123.3 20.5 175 185-400 191-367 (381)
52 cd06174 MFS The Major Facilita 99.4 1.1E-11 2.3E-16 121.2 18.4 170 197-405 2-174 (352)
53 PF11700 ATG22: Vacuole efflux 99.4 2.3E-10 4.9E-15 119.0 29.1 187 186-407 273-470 (477)
54 PRK11551 putative 3-hydroxyphe 99.4 2.1E-11 4.5E-16 123.4 20.9 151 214-403 35-188 (406)
55 PRK03699 putative transporter; 99.4 1.4E-11 3E-16 124.8 19.5 171 194-402 7-180 (394)
56 PRK15462 dipeptide/tripeptide 99.4 7.5E-12 1.6E-16 130.1 17.9 170 193-401 8-185 (493)
57 TIGR00895 2A0115 benzoate tran 99.4 7.3E-12 1.6E-16 125.1 17.2 157 210-405 33-192 (398)
58 PRK11652 emrD multidrug resist 99.4 2E-11 4.2E-16 123.4 19.9 170 197-405 11-183 (394)
59 PRK10642 proline/glycine betai 99.4 1.6E-10 3.5E-15 120.6 27.3 158 186-350 240-406 (490)
60 TIGR00891 2A0112 putative sial 99.4 2.8E-11 6.2E-16 121.4 20.5 147 197-350 15-164 (405)
61 PRK15402 multidrug efflux syst 99.4 2.2E-11 4.8E-16 123.6 19.8 155 211-404 30-187 (406)
62 PRK09528 lacY galactoside perm 99.4 5.1E-12 1.1E-16 129.0 15.1 180 187-405 216-403 (420)
63 TIGR00899 2A0120 sugar efflux 99.4 2.6E-11 5.6E-16 120.8 19.8 178 186-403 191-372 (375)
64 PRK11102 bicyclomycin/multidru 99.4 1.4E-11 3E-16 123.3 17.8 156 212-406 9-167 (377)
65 TIGR00712 glpT glycerol-3-phos 99.4 1.7E-11 3.6E-16 126.1 18.7 174 195-407 28-208 (438)
66 PRK03545 putative arabinose tr 99.4 3E-11 6.6E-16 122.0 20.2 179 186-405 197-380 (390)
67 TIGR00903 2A0129 major facilit 99.4 1.3E-11 2.8E-16 124.3 17.5 156 211-406 8-166 (368)
68 PRK11646 multidrug resistance 99.4 2.6E-11 5.7E-16 123.3 19.9 168 197-404 13-184 (400)
69 PLN00028 nitrate transmembrane 99.4 8.4E-12 1.8E-16 129.9 16.6 184 187-405 245-433 (476)
70 PRK11195 lysophospholipid tran 99.4 2.1E-11 4.6E-16 123.7 19.0 147 193-348 2-150 (393)
71 PRK12307 putative sialic acid 99.4 3.4E-11 7.3E-16 122.7 20.4 148 196-350 20-170 (426)
72 TIGR00881 2A0104 phosphoglycer 99.4 3.4E-11 7.4E-16 119.3 19.9 160 187-350 209-374 (379)
73 TIGR02718 sider_RhtX_FptX side 99.4 2.3E-10 5E-15 115.5 26.2 175 187-400 201-386 (390)
74 PRK15034 nitrate/nitrite trans 99.4 1.6E-11 3.5E-16 126.4 17.6 186 185-409 243-458 (462)
75 PRK09874 drug efflux system pr 99.4 3.6E-11 7.8E-16 121.5 19.9 174 193-406 13-194 (408)
76 PRK10489 enterobactin exporter 99.4 1.5E-11 3.2E-16 125.4 17.1 175 190-403 13-195 (417)
77 PRK10489 enterobactin exporter 99.4 1.8E-10 3.9E-15 117.4 25.1 182 189-410 219-404 (417)
78 PRK11273 glpT sn-glycerol-3-ph 99.4 3.6E-11 7.7E-16 124.2 20.1 171 197-406 28-209 (452)
79 PRK10207 dipeptide/tripeptide 99.4 1.8E-11 4E-16 127.8 17.7 150 194-350 14-171 (489)
80 PRK09874 drug efflux system pr 99.4 9.8E-11 2.1E-15 118.3 22.5 156 213-407 238-400 (408)
81 PRK03893 putative sialic acid 99.4 4.7E-11 1E-15 124.2 20.5 149 195-350 21-172 (496)
82 PRK10406 alpha-ketoglutarate t 99.4 5.9E-10 1.3E-14 114.4 27.9 182 186-406 234-425 (432)
83 TIGR00886 2A0108 nitrite extru 99.4 2.9E-11 6.3E-16 120.2 17.7 145 195-347 2-151 (366)
84 TIGR00892 2A0113 monocarboxyla 99.3 3.6E-11 7.7E-16 124.5 18.3 151 214-404 39-193 (455)
85 PRK11043 putative transporter; 99.3 6.2E-11 1.4E-15 120.0 19.7 161 206-405 18-181 (401)
86 PLN00028 nitrate transmembrane 99.3 5.5E-11 1.2E-15 123.8 19.6 173 201-404 43-218 (476)
87 TIGR00883 2A0106 metabolite-pr 99.3 3.1E-11 6.8E-16 120.2 17.0 161 184-350 207-377 (394)
88 KOG0569 Permease of the major 99.3 1.3E-09 2.9E-14 112.3 29.3 189 183-411 254-460 (485)
89 TIGR00881 2A0104 phosphoglycer 99.3 6E-12 1.3E-16 124.7 11.8 162 205-405 6-171 (379)
90 PRK10077 xylE D-xylose transpo 99.3 2.6E-10 5.7E-15 118.0 24.5 159 213-410 290-462 (479)
91 cd06174 MFS The Major Facilita 99.3 5E-11 1.1E-15 116.5 18.1 171 194-403 175-350 (352)
92 PRK15034 nitrate/nitrite trans 99.3 1.8E-10 4E-15 118.7 22.6 189 191-406 31-233 (462)
93 COG2814 AraJ Arabinose efflux 99.3 6.9E-10 1.5E-14 111.3 25.9 182 188-410 205-391 (394)
94 TIGR00903 2A0129 major facilit 99.3 8.4E-11 1.8E-15 118.5 19.1 176 187-402 185-362 (368)
95 PRK09556 uhpT sugar phosphate 99.3 2.6E-11 5.6E-16 125.8 15.7 173 196-404 27-211 (467)
96 TIGR00897 2A0118 polyol permea 99.3 7.7E-11 1.7E-15 119.7 17.8 148 197-350 16-170 (402)
97 TIGR00900 2A0121 H+ Antiporter 99.3 3.3E-10 7.1E-15 111.8 21.8 157 187-350 203-365 (365)
98 PF06609 TRI12: Fungal trichot 99.3 1.1E-10 2.4E-15 123.0 19.2 178 190-407 36-219 (599)
99 TIGR02332 HpaX 4-hydroxyphenyl 99.3 1.5E-10 3.2E-15 118.3 19.7 154 191-350 239-397 (412)
100 PRK12382 putative transporter; 99.3 9.1E-11 2E-15 118.4 18.0 153 191-350 12-176 (392)
101 PRK09705 cynX putative cyanate 99.3 1.1E-10 2.3E-15 118.5 18.4 146 196-349 8-159 (393)
102 KOG2532 Permease of the major 99.3 9.1E-11 2E-15 121.4 17.4 192 183-405 247-447 (466)
103 PRK15011 sugar efflux transpor 99.3 1.4E-09 3E-14 110.2 25.6 159 206-404 228-390 (393)
104 PF06609 TRI12: Fungal trichot 99.3 4.9E-10 1.1E-14 118.3 22.9 241 15-348 204-467 (599)
105 PRK11128 putative 3-phenylprop 99.3 2.9E-10 6.3E-15 114.7 20.3 158 185-350 196-357 (382)
106 PRK12307 putative sialic acid 99.3 1.1E-09 2.4E-14 111.6 24.8 158 186-350 220-385 (426)
107 TIGR00896 CynX cyanate transpo 99.3 1.2E-10 2.6E-15 115.9 17.4 159 186-350 189-350 (355)
108 TIGR00792 gph sugar (Glycoside 99.3 1.3E-09 2.7E-14 111.4 24.9 157 187-350 215-382 (437)
109 TIGR01272 gluP glucose/galacto 99.3 2E-10 4.4E-15 113.0 18.3 153 189-350 135-292 (310)
110 TIGR00895 2A0115 benzoate tran 99.3 2.3E-10 5E-15 114.3 18.6 145 194-345 250-397 (398)
111 PRK05122 major facilitator sup 99.3 2.1E-10 4.6E-15 115.9 18.2 150 194-350 15-176 (399)
112 TIGR00891 2A0112 putative sial 99.3 6E-10 1.3E-14 111.8 21.2 134 210-350 254-392 (405)
113 PRK10091 MFS transport protein 99.3 2.2E-09 4.7E-14 108.3 25.0 176 190-405 195-376 (382)
114 PRK03633 putative MFS family t 99.3 2.8E-10 6.1E-15 114.7 18.4 149 193-348 5-156 (381)
115 TIGR00880 2_A_01_02 Multidrug 99.3 9.5E-11 2.1E-15 99.0 12.5 133 234-405 5-138 (141)
116 TIGR00882 2A0105 oligosacchari 99.2 3E-10 6.5E-15 115.0 18.1 180 185-403 206-393 (396)
117 PRK10077 xylE D-xylose transpo 99.2 3E-10 6.6E-15 117.5 18.0 148 225-403 51-213 (479)
118 TIGR00885 fucP L-fucose:H+ sym 99.2 6.5E-10 1.4E-14 113.6 19.9 146 196-348 5-156 (410)
119 TIGR00879 SP MFS transporter, 99.2 1.4E-10 3E-15 118.4 15.0 123 213-342 47-183 (481)
120 PRK15075 citrate-proton sympor 99.2 8.8E-10 1.9E-14 113.2 20.4 155 189-350 232-396 (434)
121 PRK11010 ampG muropeptide tran 99.2 1.3E-09 2.8E-14 114.0 21.6 180 187-405 215-403 (491)
122 PRK09528 lacY galactoside perm 99.2 3.4E-10 7.4E-15 115.5 15.9 174 190-405 6-191 (420)
123 PRK10213 nepI ribonucleoside t 99.2 1.4E-08 3.1E-13 103.0 27.6 155 188-350 210-368 (394)
124 TIGR00806 rfc RFC reduced fola 99.2 1.2E-09 2.6E-14 111.8 19.2 159 216-412 48-210 (511)
125 PRK10642 proline/glycine betai 99.2 9.7E-10 2.1E-14 114.8 19.1 142 197-345 19-177 (490)
126 TIGR00899 2A0120 sugar efflux 99.2 9.7E-10 2.1E-14 109.5 18.0 157 211-405 14-176 (375)
127 TIGR00882 2A0105 oligosacchari 99.2 6.1E-10 1.3E-14 112.7 16.5 173 193-404 1-182 (396)
128 PRK10406 alpha-ketoglutarate t 99.2 1.6E-09 3.4E-14 111.3 19.7 126 213-345 41-183 (432)
129 PF01306 LacY_symp: LacY proto 99.2 2.6E-08 5.6E-13 100.9 27.9 185 187-410 213-405 (412)
130 PRK11010 ampG muropeptide tran 99.2 2.5E-09 5.5E-14 111.8 21.5 172 193-403 11-193 (491)
131 PTZ00207 hypothetical protein; 99.2 1.5E-09 3.3E-14 115.0 19.8 166 198-405 29-205 (591)
132 TIGR00894 2A0114euk Na(+)-depe 99.2 2.7E-10 5.8E-15 117.9 14.0 143 223-404 70-218 (465)
133 PRK06814 acylglycerophosphoeth 99.2 4E-09 8.7E-14 121.0 24.8 156 187-349 218-397 (1140)
134 PRK11902 ampG muropeptide tran 99.2 1.7E-08 3.7E-13 102.5 26.3 172 187-401 202-386 (402)
135 PRK03893 putative sialic acid 99.2 7.8E-10 1.7E-14 115.0 16.2 133 211-350 292-430 (496)
136 PRK06814 acylglycerophosphoeth 99.1 8.5E-10 1.8E-14 126.5 17.6 159 189-350 6-172 (1140)
137 PRK09952 shikimate transporter 99.1 4.7E-09 1E-13 108.1 21.4 105 236-347 73-186 (438)
138 TIGR00896 CynX cyanate transpo 99.1 1.5E-09 3.3E-14 108.0 16.7 146 214-397 20-167 (355)
139 PRK11646 multidrug resistance 99.1 2.8E-09 6E-14 108.5 18.3 158 186-350 200-361 (400)
140 PRK15011 sugar efflux transpor 99.1 5.3E-09 1.1E-13 106.0 20.1 175 193-406 14-195 (393)
141 PRK15402 multidrug efflux syst 99.1 4E-09 8.6E-14 107.1 19.0 156 187-350 208-372 (406)
142 PRK10054 putative transporter; 99.1 1.2E-09 2.7E-14 110.9 15.2 176 187-402 199-381 (395)
143 PF03825 Nuc_H_symport: Nucleo 99.1 4.6E-08 1E-12 99.7 26.7 188 187-407 200-397 (400)
144 PRK11902 ampG muropeptide tran 99.1 5.3E-09 1.1E-13 106.2 19.4 151 212-401 17-178 (402)
145 PRK10133 L-fucose transporter; 99.1 6.5E-09 1.4E-13 107.2 20.1 145 195-346 27-177 (438)
146 PRK08633 2-acyl-glycerophospho 99.1 1.4E-08 3.1E-13 116.3 24.7 153 187-346 225-382 (1146)
147 TIGR00710 efflux_Bcr_CflA drug 99.1 2.4E-08 5.3E-13 99.6 23.2 150 188-345 200-358 (385)
148 TIGR00887 2A0109 phosphate:H+ 99.1 7.9E-09 1.7E-13 108.3 19.9 110 231-347 60-176 (502)
149 COG3104 PTR2 Dipeptide/tripept 99.1 9.1E-10 2E-14 112.1 12.1 172 195-405 22-206 (498)
150 PRK08633 2-acyl-glycerophospho 99.1 4.8E-09 1E-13 120.2 19.0 153 189-348 4-165 (1146)
151 COG2807 CynX Cyanate permease 99.1 9.7E-09 2.1E-13 100.8 18.2 179 186-401 200-381 (395)
152 KOG4686 Predicted sugar transp 99.1 9.4E-09 2E-13 97.5 17.4 151 193-350 263-416 (459)
153 PRK10133 L-fucose transporter; 99.1 5.9E-09 1.3E-13 107.5 17.7 155 187-350 251-409 (438)
154 PF05977 MFS_3: Transmembrane 99.1 6.6E-09 1.4E-13 109.3 18.3 156 188-350 4-167 (524)
155 TIGR00901 2A0125 AmpG-related 99.1 9.1E-09 2E-13 102.4 18.4 166 214-405 8-178 (356)
156 PRK15075 citrate-proton sympor 99.0 8.1E-09 1.8E-13 106.1 18.2 143 197-346 18-177 (434)
157 TIGR00885 fucP L-fucose:H+ sym 99.0 1E-08 2.2E-13 104.8 18.1 156 186-350 224-383 (410)
158 TIGR00805 oat sodium-independe 99.0 1.4E-09 2.9E-14 117.2 11.6 128 215-349 54-235 (633)
159 TIGR00902 2A0127 phenyl propri 99.0 9.1E-09 2E-13 103.8 16.9 147 197-350 7-156 (382)
160 TIGR00898 2A0119 cation transp 99.0 1.8E-09 3.8E-14 112.8 12.0 146 216-403 111-262 (505)
161 PRK09848 glucuronide transport 99.0 1.2E-08 2.6E-13 105.2 17.8 157 187-350 221-390 (448)
162 COG2270 Permeases of the major 99.0 1.1E-08 2.5E-13 102.2 15.2 183 185-405 243-429 (438)
163 KOG0253 Synaptic vesicle trans 99.0 3.5E-09 7.5E-14 103.8 11.2 137 233-410 387-524 (528)
164 PRK11043 putative transporter; 99.0 3.5E-08 7.6E-13 99.9 19.1 159 186-349 195-358 (401)
165 PF07690 MFS_1: Major Facilita 99.0 9.6E-09 2.1E-13 100.9 14.6 146 187-339 199-352 (352)
166 PRK11128 putative 3-phenylprop 99.0 1.4E-08 3E-13 102.4 16.0 132 212-350 22-156 (382)
167 KOG1330 Sugar transporter/spin 99.0 6E-10 1.3E-14 112.2 5.4 170 202-409 41-213 (493)
168 TIGR00901 2A0125 AmpG-related 99.0 6.2E-08 1.3E-12 96.3 19.7 136 190-331 202-355 (356)
169 PF13347 MFS_2: MFS/sugar tran 98.9 1.5E-07 3.3E-12 96.4 22.9 159 185-350 216-386 (428)
170 KOG3764 Vesicular amine transp 98.9 3.3E-09 7.2E-14 104.9 9.7 141 231-410 110-252 (464)
171 PRK10473 multidrug efflux syst 98.9 4.7E-07 1E-11 91.3 24.2 148 190-350 199-351 (392)
172 PRK09669 putative symporter Ya 98.9 7.7E-08 1.7E-12 99.1 18.8 156 187-350 222-390 (444)
173 PRK11102 bicyclomycin/multidru 98.9 4.4E-07 9.5E-12 90.7 23.1 146 188-341 188-342 (377)
174 PRK10429 melibiose:sodium symp 98.9 6.2E-08 1.3E-12 100.8 17.1 155 189-350 226-395 (473)
175 TIGR01301 GPH_sucrose GPH fami 98.9 1.2E-07 2.6E-12 98.5 18.7 171 213-408 23-221 (477)
176 KOG2504 Monocarboxylate transp 98.9 1.5E-08 3.2E-13 106.2 12.0 170 197-406 45-222 (509)
177 PRK11195 lysophospholipid tran 98.9 2E-07 4.3E-12 94.6 19.5 153 189-350 200-357 (393)
178 TIGR02718 sider_RhtX_FptX side 98.8 2.3E-07 5E-12 93.7 19.5 169 199-405 6-184 (390)
179 TIGR00886 2A0108 nitrite extru 98.8 2.6E-08 5.7E-13 98.9 11.8 141 186-333 217-365 (366)
180 TIGR00883 2A0106 metabolite-pr 98.8 1.4E-07 3E-12 93.9 17.0 132 238-400 46-186 (394)
181 COG0738 FucP Fucose permease [ 98.8 1.4E-07 3E-12 93.9 16.4 156 186-350 228-386 (422)
182 PF05977 MFS_3: Transmembrane 98.8 4.1E-07 8.9E-12 95.8 20.6 179 190-407 214-396 (524)
183 COG2223 NarK Nitrate/nitrite t 98.8 5.9E-08 1.3E-12 97.0 13.4 173 195-405 15-193 (417)
184 KOG2533 Permease of the major 98.8 2.3E-07 4.9E-12 96.7 17.9 131 183-317 262-399 (495)
185 PRK11462 putative transporter; 98.8 4.3E-06 9.3E-11 86.9 27.2 158 187-350 221-389 (460)
186 KOG0255 Synaptic vesicle trans 98.8 6E-08 1.3E-12 102.0 12.9 127 232-400 123-250 (521)
187 KOG0254 Predicted transporter 98.8 1.3E-07 2.9E-12 99.4 14.7 133 230-400 92-225 (513)
188 PRK11652 emrD multidrug resist 98.7 3.9E-06 8.4E-11 84.7 24.3 153 189-348 202-360 (394)
189 TIGR00792 gph sugar (Glycoside 98.7 2.7E-07 5.9E-12 94.2 15.7 165 215-406 20-195 (437)
190 KOG2532 Permease of the major 98.7 7.1E-08 1.5E-12 100.0 11.0 143 224-405 68-216 (466)
191 PRK10207 dipeptide/tripeptide 98.7 2E-05 4.3E-10 82.6 29.0 153 230-405 312-476 (489)
192 KOG2615 Permease of the major 98.7 6.4E-08 1.4E-12 95.5 9.4 108 232-347 73-181 (451)
193 PF00083 Sugar_tr: Sugar (and 98.7 5.6E-11 1.2E-15 122.1 -13.9 161 213-412 272-443 (451)
194 KOG2533 Permease of the major 98.7 3.3E-07 7.2E-12 95.5 13.9 143 231-405 85-227 (495)
195 COG2211 MelB Na+/melibiose sym 98.6 3E-06 6.5E-11 87.0 20.1 155 189-350 231-398 (467)
196 KOG0254 Predicted transporter 98.6 4.6E-06 1E-10 87.8 21.9 181 193-412 294-490 (513)
197 KOG0252 Inorganic phosphate tr 98.5 6.6E-07 1.4E-11 90.3 11.3 176 201-411 311-503 (538)
198 PRK09669 putative symporter Ya 98.5 5.6E-06 1.2E-10 85.3 17.3 164 215-405 30-204 (444)
199 TIGR00924 yjdL_sub1_fam amino 98.5 2.3E-05 4.9E-10 81.8 22.0 145 230-407 315-470 (475)
200 COG2807 CynX Cyanate permease 98.5 6.9E-06 1.5E-10 81.0 16.3 150 215-403 33-184 (395)
201 TIGR00926 2A1704 Peptide:H+ sy 98.4 3.4E-06 7.4E-11 91.0 14.8 160 213-405 6-182 (654)
202 COG0738 FucP Fucose permease [ 98.4 1.6E-05 3.5E-10 79.4 17.8 159 216-405 35-210 (422)
203 PF13347 MFS_2: MFS/sugar tran 98.4 1.8E-06 3.9E-11 88.5 11.5 162 215-407 22-200 (428)
204 PF03209 PUCC: PUCC protein; 98.4 0.00013 2.9E-09 73.4 24.0 185 190-402 204-395 (403)
205 TIGR00788 fbt folate/biopterin 98.4 1.6E-05 3.6E-10 82.7 17.9 173 197-406 29-210 (468)
206 KOG0569 Permease of the major 98.4 5.2E-06 1.1E-10 85.9 13.9 135 232-404 65-204 (485)
207 PF01306 LacY_symp: LacY proto 98.3 7.2E-06 1.6E-10 83.3 13.7 153 191-350 4-166 (412)
208 PRK15403 multidrug efflux syst 98.3 5.5E-05 1.2E-09 77.3 20.2 159 187-348 211-373 (413)
209 PRK09584 tppB putative tripept 98.3 0.00084 1.8E-08 70.6 28.8 152 230-407 319-481 (500)
210 KOG0255 Synaptic vesicle trans 98.3 0.00026 5.6E-09 74.5 24.8 153 185-345 309-465 (521)
211 TIGR00788 fbt folate/biopterin 98.3 4E-06 8.6E-11 87.3 10.7 157 187-350 245-415 (468)
212 TIGR00889 2A0110 nucleoside tr 98.3 2.3E-05 5E-10 80.3 15.4 122 212-345 20-153 (418)
213 PRK10429 melibiose:sodium symp 98.2 5.6E-05 1.2E-09 78.7 17.5 162 213-405 25-201 (473)
214 PRK11462 putative transporter; 98.2 0.00011 2.5E-09 76.3 18.7 164 215-405 30-204 (460)
215 PRK09848 glucuronide transport 98.2 0.00014 3E-09 74.9 18.8 119 217-335 31-160 (448)
216 PF03825 Nuc_H_symport: Nucleo 98.1 9.7E-05 2.1E-09 75.4 16.7 129 198-336 9-140 (400)
217 PF06813 Nodulin-like: Nodulin 98.1 0.00011 2.3E-09 70.1 14.6 131 207-346 15-155 (250)
218 TIGR01301 GPH_sucrose GPH fami 98.1 0.00016 3.5E-09 75.3 17.0 180 194-410 258-476 (477)
219 KOG0252 Inorganic phosphate tr 98.0 1.5E-05 3.2E-10 80.8 8.5 104 232-342 89-200 (538)
220 PF00083 Sugar_tr: Sugar (and 98.0 6.6E-08 1.4E-12 99.3 -9.5 134 232-401 51-188 (451)
221 PF05631 DUF791: Protein of un 97.9 0.00091 2E-08 66.3 18.9 124 220-350 60-191 (354)
222 KOG3764 Vesicular amine transp 97.9 6.2E-05 1.3E-09 75.1 10.7 187 181-405 257-454 (464)
223 TIGR00805 oat sodium-independe 97.9 0.00058 1.3E-08 73.9 18.9 71 187-257 323-397 (633)
224 COG2211 MelB Na+/melibiose sym 97.9 0.00055 1.2E-08 70.6 17.1 169 212-406 30-208 (467)
225 KOG3762 Predicted transporter 97.9 0.00012 2.7E-09 75.5 11.5 177 189-405 366-547 (618)
226 KOG2563 Permease of the major 97.8 0.00011 2.4E-09 74.4 9.9 161 184-350 256-423 (480)
227 PF03209 PUCC: PUCC protein; 97.8 0.00074 1.6E-08 68.1 15.5 128 221-350 7-153 (403)
228 COG0477 ProP Permeases of the 97.8 0.0023 4.9E-08 59.8 18.0 127 215-348 23-158 (338)
229 PRK03612 spermidine synthase; 97.6 0.0058 1.3E-07 64.6 20.4 144 202-350 22-174 (521)
230 KOG4686 Predicted sugar transp 97.6 6.1E-05 1.3E-09 72.0 4.4 152 193-350 40-200 (459)
231 KOG2816 Predicted transporter 97.6 0.0006 1.3E-08 70.7 11.8 131 235-408 70-202 (463)
232 PF03092 BT1: BT1 family; Int 97.5 0.0021 4.6E-08 66.3 15.2 155 218-407 14-177 (433)
233 PF05978 UNC-93: Ion channel r 97.5 0.005 1.1E-07 54.4 14.2 107 233-346 43-149 (156)
234 PRK15462 dipeptide/tripeptide 97.4 0.034 7.3E-07 58.3 22.4 117 225-344 305-436 (493)
235 KOG0253 Synaptic vesicle trans 97.3 0.007 1.5E-07 60.3 14.0 141 224-405 108-251 (528)
236 KOG2325 Predicted transporter/ 97.0 0.008 1.7E-07 62.4 12.5 185 197-408 37-232 (488)
237 KOG1330 Sugar transporter/spin 97.0 0.001 2.2E-08 67.8 5.2 159 190-350 240-414 (493)
238 PF00854 PTR2: POT family; In 96.9 0.0051 1.1E-07 61.9 9.9 105 267-404 5-122 (372)
239 PF11700 ATG22: Vacuole efflux 96.9 0.078 1.7E-06 55.5 18.5 144 232-406 75-248 (477)
240 PF12832 MFS_1_like: MFS_1 lik 96.7 0.0066 1.4E-07 47.0 6.8 58 203-260 9-68 (77)
241 TIGR01272 gluP glucose/galacto 96.6 0.017 3.6E-07 56.8 10.8 64 284-348 9-72 (310)
242 TIGR00939 2a57 Equilibrative N 96.6 0.074 1.6E-06 55.0 16.0 103 232-339 312-425 (437)
243 PF01770 Folate_carrier: Reduc 96.4 0.16 3.5E-06 51.8 16.3 137 187-330 240-385 (412)
244 PF03137 OATP: Organic Anion T 96.4 0.00059 1.3E-08 72.3 -1.4 166 184-350 295-516 (539)
245 KOG2615 Permease of the major 96.2 0.21 4.6E-06 50.2 15.6 123 222-349 290-415 (451)
246 KOG2563 Permease of the major 96.2 0.061 1.3E-06 55.0 11.9 110 231-347 83-201 (480)
247 COG2270 Permeases of the major 96.0 0.055 1.2E-06 54.9 10.7 155 232-406 63-221 (438)
248 KOG2816 Predicted transporter 95.9 0.44 9.5E-06 49.6 16.9 119 224-350 272-394 (463)
249 PF02487 CLN3: CLN3 protein; 95.8 2.7 5.9E-05 42.9 22.6 101 232-341 286-390 (402)
250 KOG3098 Uncharacterized conser 95.5 1.5 3.2E-05 45.5 19.1 49 287-336 355-403 (461)
251 TIGR00769 AAA ADP/ATP carrier 95.2 1.7 3.7E-05 45.4 18.7 53 294-347 137-190 (472)
252 PF01770 Folate_carrier: Reduc 94.9 1.2 2.5E-05 45.6 16.0 149 224-410 35-187 (412)
253 COG3104 PTR2 Dipeptide/tripept 94.7 6.6 0.00014 41.0 26.0 118 225-343 321-451 (498)
254 PF03092 BT1: BT1 family; Int 93.9 0.97 2.1E-05 46.6 13.1 116 232-350 256-382 (433)
255 KOG2325 Predicted transporter/ 93.5 0.45 9.7E-06 49.6 9.7 86 292-410 395-480 (488)
256 KOG3098 Uncharacterized conser 92.6 0.34 7.4E-06 50.2 7.2 101 233-340 56-156 (461)
257 TIGR00806 rfc RFC reduced fola 92.5 1 2.2E-05 47.0 10.5 95 232-330 303-398 (511)
258 PF06963 FPN1: Ferroportin1 (F 92.4 15 0.00033 38.0 20.2 53 333-418 161-213 (432)
259 KOG0637 Sucrose transporter an 92.2 0.64 1.4E-05 47.8 8.4 127 214-343 52-199 (498)
260 KOG3810 Micronutrient transpor 92.0 1.4 3.1E-05 43.9 10.3 174 197-402 239-418 (433)
261 KOG1237 H+/oligopeptide sympor 92.0 1.3 2.9E-05 47.3 11.1 164 204-405 47-245 (571)
262 PF03137 OATP: Organic Anion T 91.3 0.04 8.8E-07 58.5 -1.3 173 215-405 24-250 (539)
263 PF01733 Nucleoside_tran: Nucl 91.0 0.08 1.7E-06 52.0 0.6 99 232-336 187-299 (309)
264 COG4262 Predicted spermidine s 90.8 19 0.00042 36.1 17.0 116 197-312 10-132 (508)
265 KOG3626 Organic anion transpor 89.4 19 0.0004 39.7 16.9 70 186-255 384-457 (735)
266 PF06963 FPN1: Ferroportin1 (F 89.3 10 0.00023 39.1 14.4 154 187-346 252-415 (432)
267 PF06779 DUF1228: Protein of u 89.0 1.7 3.8E-05 34.2 6.5 66 210-281 8-75 (85)
268 KOG1479 Nucleoside transporter 88.8 6.3 0.00014 40.2 12.1 106 232-345 287-401 (406)
269 KOG3626 Organic anion transpor 88.3 2.1 4.6E-05 46.8 8.8 172 216-408 119-346 (735)
270 PF13000 Acatn: Acetyl-coenzym 86.1 36 0.00078 35.8 15.8 100 296-402 416-522 (544)
271 KOG3762 Predicted transporter 84.4 2 4.3E-05 45.2 5.9 48 213-260 30-79 (618)
272 TIGR00939 2a57 Equilibrative N 80.7 37 0.0008 35.1 13.7 45 287-336 108-152 (437)
273 PF02487 CLN3: CLN3 protein; 72.7 32 0.0007 35.2 10.4 97 239-347 71-168 (402)
274 PF03547 Mem_trans: Membrane t 72.5 51 0.0011 33.0 11.9 21 187-207 238-258 (385)
275 KOG4332 Predicted sugar transp 71.2 9.3 0.0002 37.1 5.6 90 221-317 64-157 (454)
276 PF05631 DUF791: Protein of un 69.7 1.3E+02 0.0028 30.3 15.2 63 192-254 117-186 (354)
277 KOG3574 Acetyl-CoA transporter 57.1 95 0.0021 31.9 9.9 126 206-336 42-184 (510)
278 COG4858 Uncharacterized membra 56.2 25 0.00055 31.7 5.2 84 2-89 118-208 (226)
279 COG4603 ABC-type uncharacteriz 53.4 1.8E+02 0.0039 29.3 11.4 34 286-319 112-145 (356)
280 PF07672 MFS_Mycoplasma: Mycop 49.0 2.5E+02 0.0055 27.0 18.2 93 232-325 146-246 (267)
281 KOG1479 Nucleoside transporter 48.7 3.2E+02 0.0069 28.1 15.4 30 288-318 120-149 (406)
282 PRK10263 DNA translocase FtsK; 46.6 2.2E+02 0.0048 33.7 11.9 18 332-350 142-159 (1355)
283 COG5336 Uncharacterized protei 43.6 50 0.0011 27.1 4.6 17 240-256 55-71 (116)
284 TIGR01666 YCCS hypothetical me 42.8 2.7E+02 0.0059 30.8 11.7 29 384-412 132-160 (704)
285 COG1079 Uncharacterized ABC-ty 41.0 3.6E+02 0.0078 26.5 11.2 49 294-343 67-115 (304)
286 PF12805 FUSC-like: FUSC-like 39.4 3.5E+02 0.0077 25.9 11.9 29 384-412 74-102 (284)
287 TIGR01667 YCCS_YHJK integral m 39.1 3.1E+02 0.0068 30.3 11.5 35 267-301 61-97 (701)
288 COG5336 Uncharacterized protei 36.3 1.1E+02 0.0023 25.3 5.4 32 318-350 39-70 (116)
289 KOG4332 Predicted sugar transp 36.0 2.5E+02 0.0054 27.6 8.8 41 288-328 347-387 (454)
290 PF02990 EMP70: Endomembrane p 34.7 3.9E+02 0.0085 28.3 11.1 67 190-257 254-327 (521)
291 PF14143 YrhC: YrhC-like prote 32.2 1.2E+02 0.0027 23.0 4.9 27 39-68 7-33 (72)
292 KOG3880 Predicted small molecu 31.2 5.6E+02 0.012 25.7 11.7 102 231-341 292-397 (409)
293 PF06912 DUF1275: Protein of u 30.3 4.1E+02 0.009 24.0 19.9 23 328-350 168-190 (209)
294 PF01102 Glycophorin_A: Glycop 29.9 69 0.0015 27.0 3.6 28 383-410 67-94 (122)
295 PF12832 MFS_1_like: MFS_1 lik 27.2 2.8E+02 0.006 21.0 8.6 30 320-350 34-63 (77)
296 PF11947 DUF3464: Protein of u 26.8 1.5E+02 0.0033 26.0 5.3 32 304-335 113-144 (153)
297 PTZ00370 STEVOR; Provisional 26.6 2.9E+02 0.0063 26.9 7.5 34 383-416 257-290 (296)
298 PRK03612 spermidine synthase; 25.8 8.1E+02 0.018 25.9 18.1 62 194-255 18-82 (521)
299 PF07214 DUF1418: Protein of u 23.8 1.5E+02 0.0033 23.8 4.3 28 71-98 39-66 (96)
300 COG3619 Predicted membrane pro 23.3 6.2E+02 0.014 23.7 18.1 59 216-276 42-101 (226)
301 PRK06041 flagellar assembly pr 23.2 2.6E+02 0.0055 30.0 7.3 28 2-29 214-241 (553)
302 PF06645 SPC12: Microsomal sig 22.7 3.5E+02 0.0076 20.6 6.1 22 325-348 12-33 (76)
303 PF15099 PIRT: Phosphoinositid 22.6 1.3E+02 0.0028 25.4 3.8 30 383-412 83-112 (129)
304 PF02990 EMP70: Endomembrane p 21.5 3.1E+02 0.0066 29.1 7.5 29 319-348 295-323 (521)
305 KOG3097 Predicted membrane pro 21.1 1.6E+02 0.0035 29.5 4.8 58 244-311 75-136 (390)
306 KOG2927 Membrane component of 20.1 1.7E+02 0.0038 29.2 4.7 24 382-405 227-250 (372)
307 TIGR00880 2_A_01_02 Multidrug 20.1 4.3E+02 0.0093 20.6 7.6 25 232-256 92-116 (141)
No 1
>PTZ00207 hypothetical protein; Provisional
Probab=100.00 E-value=4.5e-49 Score=413.01 Aligned_cols=346 Identities=19% Similarity=0.286 Sum_probs=280.8
Q ss_pred CCCCchHHHHHHHHHHHHHHHHHHhhcccCCCCcc------c-----------------CCCCchhHHHHHHHHHHHHHH
Q 014462 3 SANETSLIFLVAVGPSIVVMAFMFIVRPIGGHRQV------R-----------------LSDNTSFLFTYTVCLILAAYM 59 (424)
Q Consensus 3 ~~~~~~~~llla~~p~~v~~~~~~~~r~~~~~~~~------~-----------------~~~~~~f~~~~~~~~~l~~~l 59 (424)
.+|.+.+++++++++.+++++++.++|.++++++. + +.+.++|++++++++++++|+
T Consensus 180 ~~~~~~~fl~l~vl~~vv~ll~~~~vr~p~~~~~~~~~~~~~~~~~~~~~~~~~~y~~q~~p~~~f~~~~~i~~~l~~yl 259 (591)
T PTZ00207 180 SDNTSAYFFFLMSFALVVGILAIVFMRLPPFHLTGYQEKHLDEEEKAQRLMRKGVYLKQKAPMWRFVYGFVILIILIVFL 259 (591)
T ss_pred HHhHHHHHHHHHHHHHHHHHHHHhheeCCcchhhcccccCCCHHHHHHHhhhhhhhhhcCCCceehhhHHHHHHHHHHHH
Confidence 45678899999999999999999999988766531 1 223448999999999999999
Q ss_pred HHHHHhhcccccchHHHHHHHHHHH-HHHHhh-hhHhhhhhccCCCCCCccchhhcccccCcCCCcchhhhHhhhhcccC
Q 014462 60 LAVLLLEDLEVANQNVLTVLAVGLI-IIILLP-VTIPVVLVFFTEPPPPVEETLLAETNKGEASKSEDYQEEVILSEVED 137 (424)
Q Consensus 60 ~~~~~~~~~~~~s~~~~~~~~~v~~-~ll~~P-l~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 137 (424)
+++++++++.+++++.+..++++++ ++++.| +++|++.. ..+.+ +++ ++ . ++ .+..
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~v~~~lll~~p~l~ip~~~~-~~~~~---~~~---~~-~--~~---~~~~--------- 317 (591)
T PTZ00207 260 PLQGALVAYLKLGSNFKVGFAVTVIVLTVIFPFMAFPLTTF-DGKRP---HDD---SD-G--KA---KEHV--------- 317 (591)
T ss_pred HHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHhhhHHHh-ccCCc---CCC---cc-c--cc---cccc---------
Confidence 9999999999999999999999888 777889 88888861 11111 000 00 0 00 0000
Q ss_pred CCCCCCCCCChhhHHHHHHHHHHHHHHHhhhhh-HHHhhh-cCCCCCCCCCHHHhhhhHHHHHHHHHHHHhhhhHHHHHh
Q 014462 138 EKPPEVDSLPASERQKRIAHLQAKLFQAAAEGA-VRVKRR-KGPRRGEDFTLPQALMKADFLLLFFSLVLASGSGLTVID 215 (424)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~t~~~~l~~~~fwll~~~~~~~~~~~~~~~~ 215 (424)
+...+. +..+++ ...+.+ ..|++++ +++|.+++.|||+++++++|+.+++++++|
T Consensus 318 ~~~~~~---------------------~~~~~~~~~~~~~~~~P~~~~--t~~q~l~~~d~Wll~~~~~cg~g~gl~~~~ 374 (591)
T PTZ00207 318 EAGEEV---------------------SAAEDKVVETDVDYIAPQFQE--TFIEGLKTARLWCLLWSIFCCVGAHFVIIF 374 (591)
T ss_pred cccccc---------------------cccccccccccccCCCCCCcc--hHHHHHhchhHHHHHHHHHHhhCchheeee
Confidence 000000 000000 001112 3377665 999999999999999999999999999999
Q ss_pred cHHHHHHHc-CC-Cch--hH-HHHHHHHHhhhhhhhhhhhhhhhhhccc----CchhHHHHHHHHHHHHHHHHHHhchh-
Q 014462 216 NLGQICQSL-GY-ADT--SI-YVSMISIWNFLGRVGGGYFSEAIVRKFA----YPRPVAMAVAQVVMAFALLYYAIGWP- 285 (424)
Q Consensus 216 ~l~~i~~~~-g~-s~~--~~-~~sl~si~~~~gr~~~G~lsd~~g~k~~----~~r~~~l~~~~~~~~~~~ll~~~~~~- 285 (424)
|++||.+++ |+ ++. ++ +++++++||++||+++|+++ .+-+|+. +|||+++++.++ +.+++++++...+
T Consensus 375 N~~qI~~sl~g~~~~~~~~~~~vsL~si~~~~GRl~~g~~~-~~~~~~~~~~r~prt~~l~~~~~-~~~~~lll~~~~p~ 452 (591)
T PTZ00207 375 NARFIYTALAGEAPDDALNTLLTVLNGVGSAVGRLCMSYFE-IWSQKRRAEDRVPITIALFIPSV-CIITMLTLFLTLPK 452 (591)
T ss_pred cHHHHHHHhcCCCCCccceeeehhhhhHHHHhhHHHHHHHH-HHHHhhccccccchhHHHHHHHH-HHHHHHHHHHHCCc
Confidence 999999999 88 333 34 89999999999999999997 6655554 999999999998 8888888776655
Q ss_pred HHHHHHHHHHHHHhhhhHhHHHHHHHHhhCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhccCCCC
Q 014462 286 GEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIASGIYDYYAEKQAGLLWKYNGNML 365 (424)
Q Consensus 286 ~~l~~~~~l~G~~~G~~~~~~~~~~se~fg~~~~g~~~g~~~~~~~lgs~l~~~~l~g~l~d~~~~~~~~~~~~~~~~~~ 365 (424)
..+|++++++|+|+|++|++.+++++|+|| |++|++||+..++.++|+++|+..++|.+||++++|+
T Consensus 453 ~~L~~~~~lvg~~~G~~~~~~~~i~selFg-k~~g~~yN~~~~a~pigs~~~n~~l~G~~Yd~ea~k~------------ 519 (591)
T PTZ00207 453 AALPLPYFIAAFANGFMAATIALVTRTIFA-KDPAKHYNFCFLGSVLSAIFLNRLLYGEWYTQQADKL------------ 519 (591)
T ss_pred cHhHHHHHHHHHHhhHhHHHHHHHHHHHhc-cchHHHhhHHhHHHHHHHHHHHHHHHHHHHHHHHhhC------------
Confidence 789999999999999999999999999999 9999999999999999999999999999999999653
Q ss_pred CcccCCCCCCcccCCcchHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHH
Q 014462 366 PVSFRDQETPTCLGSICYSITCGIMAGLCIIAMVMSLIVVHRTKSVYAQL 415 (424)
Q Consensus 366 ~~~~~~~~~~~c~g~~c~~~~f~i~a~~~~~~~~l~~~l~~~~~~~~~~~ 415 (424)
++.+|+|++||+.+|++++++|++|++++++++.|+|++|++.
T Consensus 520 -------~~~~C~G~~C~~~~~~v~~~~~~~g~~~s~~l~~R~r~~y~~~ 562 (591)
T PTZ00207 520 -------GQDVCTERVCVVMPLAFLLGLSFLAFITSTYVHLQYRRLCLKA 562 (591)
T ss_pred -------CCCeeCCceeeHhHHHHHHHHHHHHHHHHhheeeehHHHHHHH
Confidence 3569999999999999999999999999999999999999865
No 2
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=99.62 E-value=3e-13 Score=139.63 Aligned_cols=194 Identities=15% Similarity=0.149 Sum_probs=137.3
Q ss_pred hhhhHHHHHHHHHHHHhhhhHHHHHhcHHHHHHH-cCCCchhH--HHHHHHHHhhhhhhhhhhhhhhhhhcccCchhHHH
Q 014462 190 ALMKADFLLLFFSLVLASGSGLTVIDNLGQICQS-LGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAM 266 (424)
Q Consensus 190 ~l~~~~fwll~~~~~~~~~~~~~~~~~l~~i~~~-~g~s~~~~--~~sl~si~~~~gr~~~G~lsd~~g~k~~~~r~~~l 266 (424)
.++++.+|.+++..++.....+...+++|.++++ .|++.... +.++..+++.+|++++|+++||+++++... ..
T Consensus 249 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~P~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~G~l~dr~~~~r~~~---~~ 325 (452)
T PRK11273 249 VLPNKLLWYIAIANVFVYLLRYGILDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFRGNRGA---TG 325 (452)
T ss_pred HHcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCcch---HH
Confidence 6788999998888888777777778899999977 68876543 667888999999999999999996543221 11
Q ss_pred HHHHHHHHHHHHHHHh---chhHHHHHHHHHHHHHhhhhHhHHHHHHHHhhCcchhhHHHHHHHHHHHHHHHHHHHHHHH
Q 014462 267 AVAQVVMAFALLYYAI---GWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIAS 343 (424)
Q Consensus 267 ~~~~~~~~~~~ll~~~---~~~~~l~~~~~l~G~~~G~~~~~~~~~~se~fg~~~~g~~~g~~~~~~~lgs~l~~~~l~g 343 (424)
.....+..++.+++.. .+....++...+.|.+...........+.|.+|++.+|++.|+.+....+|+.+.+|.+.|
T Consensus 326 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~g~~v~g 405 (452)
T PRK11273 326 VFFMTLVTIATIVYWLNPAGNPTVDMACMIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVG 405 (452)
T ss_pred HHHHHHHHHHHHHHHHhcccChHHHHHHHHHHHHHHHhHHHHHHHHHHHHcChhhhhhHHHHHHHHHHHHHHHhhhhhHH
Confidence 1112222222222211 1223333444555554433333445567899999999999999998888887654799999
Q ss_pred HHHhhhhhhhhhhhhhccCCCCCcccCCCCCCcccCCcchHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHhhh
Q 014462 344 GIYDYYAEKQAGLLWKYNGNMLPVSFRDQETPTCLGSICYSITCGIMAGLCIIAMVMSLIVVHRTKSVYAQLYGN 418 (424)
Q Consensus 344 ~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~g~~c~~~~f~i~a~~~~~~~~l~~~l~~~~~~~~~~~~~~ 418 (424)
.++|..+ |+..|++++++++++++...++.+.+||..+++..|
T Consensus 406 ~l~~~~g--------------------------------~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 448 (452)
T PRK11273 406 YTVDFFG--------------------------------WDGGFMVMIGGSILAVILLIVVMIGEKRHHEELLQK 448 (452)
T ss_pred HHHHHhc--------------------------------chHHHHHHHHHHHHHHHHHHHHhccccchHHHHHhh
Confidence 9999887 999999999999999888887766666656555443
No 3
>PRK11663 regulatory protein UhpC; Provisional
Probab=99.59 E-value=3.7e-13 Score=138.26 Aligned_cols=186 Identities=18% Similarity=0.148 Sum_probs=128.8
Q ss_pred hhhhHHHHHHHHHHHHhhhhHHHHHhcHHHHHH-HcCCCchhH--HHHHHHHHhhhhhhhhhhhhhhhhhcccCchhHHH
Q 014462 190 ALMKADFLLLFFSLVLASGSGLTVIDNLGQICQ-SLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAM 266 (424)
Q Consensus 190 ~l~~~~fwll~~~~~~~~~~~~~~~~~l~~i~~-~~g~s~~~~--~~sl~si~~~~gr~~~G~lsd~~g~k~~~~r~~~l 266 (424)
.++++.+|.+.+..++......++.+++|++++ ++|++..+. ..+.+.+++.+|++++|+++||+.++++-+.....
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~a~~~~~~~~~~~~~g~~~~g~l~dr~~~~~r~~~~~~~ 318 (434)
T PRK11663 239 VLLNPYIWLLSFSYVLVYVVRAAINDWGNLYMSETLGVDLVTANSAVSMFELGGFIGALVAGWGSDKLFNGNRGPMNLIF 318 (434)
T ss_pred HhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHHHhhhHHHhccCCccHHHHHH
Confidence 667889999888777776666677789999985 479987654 78888999999999999999999544322111111
Q ss_pred HHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHhhhhHhHHHHHHHHhhCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 014462 267 AVAQVVMAFALLYYAIGWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIASGIY 346 (424)
Q Consensus 267 ~~~~~~~~~~~ll~~~~~~~~l~~~~~l~G~~~G~~~~~~~~~~se~fg~~~~g~~~g~~~~~~~lgs~l~~~~l~g~l~ 346 (424)
.++.++..++.+.+...+...++...++.|++...........++|.+|++++|+..|+.++...+|+.+ +|.+.|.+.
T Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~-~p~~~g~l~ 397 (434)
T PRK11663 319 AAGILLSVGSLWLMPFASYVMQAACFFTIGFFVFGPQMLIGMAAAECSHKEAAGAATGFVGLFAYLGAAL-SGYPLAKVL 397 (434)
T ss_pred HHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHhhHHHHHHHHHHhcccHhhHHhHHHHHHHHHHHHHHH-hcccHHHHH
Confidence 2222222222221222222223333344444333333345567889999999999999999999999997 999999999
Q ss_pred hhhhhhhhhhhhhccCCCCCcccCCCCCCcccCCcchHHHHHHHHHHHHHHHHHHHHHhhhh
Q 014462 347 DYYAEKQAGLLWKYNGNMLPVSFRDQETPTCLGSICYSITCGIMAGLCIIAMVMSLIVVHRT 408 (424)
Q Consensus 347 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~g~~c~~~~f~i~a~~~~~~~~l~~~l~~~~ 408 (424)
|..+ |+.+|++.+++++++++..+...+++
T Consensus 398 ~~~g--------------------------------~~~~f~~~~~~~~~~~~~~~~~~~~~ 427 (434)
T PRK11663 398 EIWH--------------------------------WTGFFVVISIAAGISALLLLPFLNAQ 427 (434)
T ss_pred Hhcc--------------------------------cHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 9876 99999999998888876655444333
No 4
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.58 E-value=8.6e-13 Score=130.94 Aligned_cols=188 Identities=14% Similarity=0.090 Sum_probs=134.0
Q ss_pred CCCHHHhhhhHHHHHHHHHHHHhhhhHHHHHhcHHHHHHH-cCCCchhH--HHHHHHHHhhhhhhhhhhhhhhhhhcccC
Q 014462 184 DFTLPQALMKADFLLLFFSLVLASGSGLTVIDNLGQICQS-LGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAY 260 (424)
Q Consensus 184 ~~t~~~~l~~~~fwll~~~~~~~~~~~~~~~~~l~~i~~~-~g~s~~~~--~~sl~si~~~~gr~~~G~lsd~~g~k~~~ 260 (424)
..+.++.++++++|.+.+..++.......+..++|++.++ +|.+..+. +.+...+++.++++..|+++||+++|+..
T Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 284 (399)
T TIGR00893 205 KYQIKELLKDRRVWGLALGQFLVNIGLGFFLTWFPTYLVQERGLSILEAGFMASLPGIVGFIGMILGGRLSDLLLRRGKS 284 (399)
T ss_pred ccchHHHhcCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcccHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhhcccc
Confidence 3456778999999999988888888888888889988865 78876543 77888899999999999999999988622
Q ss_pred c--hhHHHHHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHhhhhHhHHHHHHHHhhCcchhhHHHHHHHHHHHHHHHHHH
Q 014462 261 P--RPVAMAVAQVVMAFALLYYAIGWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFS 338 (424)
Q Consensus 261 ~--r~~~l~~~~~~~~~~~ll~~~~~~~~l~~~~~l~G~~~G~~~~~~~~~~se~fg~~~~g~~~g~~~~~~~lgs~l~~ 338 (424)
. ......++.++.++..............+...+.+.+..+..+...++++|.+|.+++|+.+++.+....+|+.+ +
T Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~-~ 363 (399)
T TIGR00893 285 LVFARKTAIIAGLVLSLLMFATNYVNIPYAALALVALGFFGLGAGAIGWALISDNAPGNIAGLTGGLINSLGNLGGIV-G 363 (399)
T ss_pred hhHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHhchhhhhHHHHHHHhhcChhHHHHHHHHHHHHHHHhhhh-h
Confidence 0 000111111111111111111112222333333333333377889999999999999999999999999999997 8
Q ss_pred HHHHHHHHhhhhhhhhhhhhhccCCCCCcccCCCCCCcccCCcchHHHHHHHHHHHHHHHHHHHH
Q 014462 339 GVIASGIYDYYAEKQAGLLWKYNGNMLPVSFRDQETPTCLGSICYSITCGIMAGLCIIAMVMSLI 403 (424)
Q Consensus 339 ~~l~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~g~~c~~~~f~i~a~~~~~~~~l~~~ 403 (424)
|.+.|.++|..+ .|+..|.+.+++++++.++.++
T Consensus 364 ~~i~g~l~~~~g-------------------------------~~~~~~~~~~~~~~~~~~~~~~ 397 (399)
T TIGR00893 364 PIVIGAIAATTG-------------------------------SFAGALMVVAALALIGALSYLL 397 (399)
T ss_pred hHHhhhhccCCC-------------------------------chhHHHHHHHHHHHHHHHHHHH
Confidence 999999998766 2888999998888887766544
No 5
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=99.58 E-value=2.1e-13 Score=141.40 Aligned_cols=191 Identities=15% Similarity=0.087 Sum_probs=133.0
Q ss_pred hhhhHHHHHHHHHHHHhhhhHHHHHhcHHHHHHH-cCCCchhH--HHHHHHHHhhhhhhhhhhhhhhhhhcccCchhHHH
Q 014462 190 ALMKADFLLLFFSLVLASGSGLTVIDNLGQICQS-LGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAM 266 (424)
Q Consensus 190 ~l~~~~fwll~~~~~~~~~~~~~~~~~l~~i~~~-~g~s~~~~--~~sl~si~~~~gr~~~G~lsd~~g~k~~~~r~~~l 266 (424)
.++++.+|.+.+..++......+...++|.++++ +|++..++ ..+...+++.+|++.+|+++||+++|+.. ..
T Consensus 254 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~yl~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~g~r~~~----~~ 329 (467)
T PRK09556 254 VLKNPVIWLLCFANIFLYIVRIGIDNWSPVYAFQELGFSKEDAINTFTLFEIGALVGSLLWGWLSDLANGRRAL----VA 329 (467)
T ss_pred HHcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCchH----HH
Confidence 7889999999999888888777888899998865 89987654 77778899999999999999999987543 11
Q ss_pred HHHHHHHHHHHHHHHh-chhHHHHHHHHHHHHHhhhhHhHHHHHHHHhhCcchhhHHHHHHHHHHHH-HHHHHHHHHHHH
Q 014462 267 AVAQVVMAFALLYYAI-GWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPA-GSLIFSGVIASG 344 (424)
Q Consensus 267 ~~~~~~~~~~~ll~~~-~~~~~l~~~~~l~G~~~G~~~~~~~~~~se~fg~~~~g~~~g~~~~~~~l-gs~l~~~~l~g~ 344 (424)
...........+.+.. .+...+++..++.|++..+........+.|.+|.+++|++.|+.+....+ |+.+ +|.+.|.
T Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~p~~~~g~a~gi~~~~g~l~g~~~-~~~~~G~ 408 (467)
T PRK09556 330 CIALALIIFTLGVYQHATSEYMYLASLFALGFLVFGPQLLIGVAAVGFVPKKAIGVANGIKGTFAYLFGDSF-AKVGLGM 408 (467)
T ss_pred HHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHhhHHHHHHHHHHhhcchhhHHHHHHHHHHHHHHHhHHH-HhhhHHH
Confidence 1111111111112222 23344556666777544333334456777999999999999999999887 5565 8999999
Q ss_pred HHhhhhhhhhhhhhhccCCCCCcccCCCCCCcccCCcchHHHHHHHHHHHHHHHHHHHHHh
Q 014462 345 IYDYYAEKQAGLLWKYNGNMLPVSFRDQETPTCLGSICYSITCGIMAGLCIIAMVMSLIVV 405 (424)
Q Consensus 345 l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~g~~c~~~~f~i~a~~~~~~~~l~~~l~ 405 (424)
+.|.+.... + ..=+....|+..|.+++++++++++..+.+.
T Consensus 409 i~~~~~~g~--------------~------~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~ 449 (467)
T PRK09556 409 IADPTKNGT--------------P------IFGYTLTGWAGTFAALDIAAIGCICLMAIVA 449 (467)
T ss_pred Hhccccccc--------------c------cccccccChHHHHHHHHHHHHHHHHHHHHHH
Confidence 999321000 0 0000011399999999999999888877665
No 6
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=99.58 E-value=9.3e-13 Score=142.93 Aligned_cols=137 Identities=12% Similarity=0.131 Sum_probs=106.9
Q ss_pred HHHHHHHhhhhhhhhhhhhhhhhhcccCchhHHHHHHHHHHHHHHHHHHh-chhHHHHHHHHHHHHHhhhhHhHHHHHHH
Q 014462 233 VSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVMAFALLYYAI-GWPGEIYVTTVLVGLSYGAHWAIVPAAAS 311 (424)
Q Consensus 233 ~sl~si~~~~gr~~~G~lsd~~g~k~~~~r~~~l~~~~~~~~~~~ll~~~-~~~~~l~~~~~l~G~~~G~~~~~~~~~~s 311 (424)
..+.+++..+|.+++|+++||+|||+.+ .++.++.+++.+++.. .+...+++..++.|++.++.++...++++
T Consensus 601 ~~l~~l~~i~G~il~g~L~Dr~GRr~~l------~~~~~lsai~~ll~~~~~s~~~ll~~~~l~g~~~~~~~~~~~a~~a 674 (742)
T TIGR01299 601 NFLGTLAVLPGNIVSALLMDKIGRLRML------AGSMVLSCISCFFLSFGNSESAMIALLCLFGGLSIAAWNALDVLTV 674 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCHHHH------HHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4566688899999999999999998754 5555555555555443 23445566667888888889999999999
Q ss_pred HhhCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhccCCCCCcccCCCCCCcccCCcchHHHHHHHH
Q 014462 312 ELFGLKSFGALYNFLTLASPAGSLIFSGVIASGIYDYYAEKQAGLLWKYNGNMLPVSFRDQETPTCLGSICYSITCGIMA 391 (424)
Q Consensus 312 e~fg~~~~g~~~g~~~~~~~lgs~l~~~~l~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~g~~c~~~~f~i~a 391 (424)
|+||++.||+++|+.++...+|+++ +|+++|.+.+. . ...+|++.+
T Consensus 675 El~Pt~~Rgta~Gi~~~~~rlGaii-gp~i~g~L~~~-~--------------------------------~~~pf~i~a 720 (742)
T TIGR01299 675 ELYPSDKRATAFGFLNALCKAAAVL-GILIFGSFVGI-T--------------------------------KAAPILFAS 720 (742)
T ss_pred HHcCHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHh-h--------------------------------hHHHHHHHH
Confidence 9999999999999999999999998 99999988763 2 457788888
Q ss_pred HHHHHHHHHHHHHhhhhhH
Q 014462 392 GLCIIAMVMSLIVVHRTKS 410 (424)
Q Consensus 392 ~~~~~~~~l~~~l~~~~~~ 410 (424)
++.++++++.+++ .+|++
T Consensus 721 ~~lll~~ll~~~L-PET~~ 738 (742)
T TIGR01299 721 AALACGGLLALKL-PDTRG 738 (742)
T ss_pred HHHHHHHHHHHhC-CCCcc
Confidence 8777777776655 45543
No 7
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.57 E-value=7.6e-14 Score=138.23 Aligned_cols=174 Identities=26% Similarity=0.317 Sum_probs=137.8
Q ss_pred CHHHhhhhHHHHHHHHHHHHhhhhHHHHHhcHHHHHHHcCCCchhH--HHHHHHHHhhhhhhhhhhhhhhhhhcccCchh
Q 014462 186 TLPQALMKADFLLLFFSLVLASGSGLTVIDNLGQICQSLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRP 263 (424)
Q Consensus 186 t~~~~l~~~~fwll~~~~~~~~~~~~~~~~~l~~i~~~~g~s~~~~--~~sl~si~~~~gr~~~G~lsd~~g~k~~~~r~ 263 (424)
+.++.++++++|.+....++..........+.+++.+++|.+.... +.++.++.+.++++..|+++||++||+..
T Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~--- 273 (377)
T TIGR00890 197 TVWEMLRTPQFWVLYLSFFLNAVSGLLLIGLYKPYGQSLGLSDGFLVLAVSISSIFNGGGRPFLGALSDKIGRQKTM--- 273 (377)
T ss_pred hHHHHHcCccHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhh---
Confidence 4667889999998888777766666666667777888888876543 78889999999999999999999987654
Q ss_pred HHHHHHHHHHHHHHHHHHhch---hHHHHHHHHHHHHHhhhhHhHHHHHHHHhhCcchhhHHHHHHHHHHHHHHHHHHHH
Q 014462 264 VAMAVAQVVMAFALLYYAIGW---PGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGV 340 (424)
Q Consensus 264 ~~l~~~~~~~~~~~ll~~~~~---~~~l~~~~~l~G~~~G~~~~~~~~~~se~fg~~~~g~~~g~~~~~~~lgs~l~~~~ 340 (424)
.++.++++++.+++...+ ...++...++.|++.|..++..+..++|.+|.+++|+.+|+.+....+|+.+ +|.
T Consensus 274 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~-~~~ 349 (377)
T TIGR00890 274 ---SIVFGISAVGMAAMLFIPMLNDVLFLATVALVFFTWGGTISLFPSLVSDIFGPANSAANYGFLYTAKAVAGIF-GGL 349 (377)
T ss_pred ---hHHHHHHHHHHHHHHHcccchhHHHHHHHHHHHHHhccchhccHHHHHHHhhhhhhhhHhHHHHHHHHHHHHH-HHH
Confidence 444555555554443222 2233455677888889888888999999999999999999999999999997 999
Q ss_pred HHHHHHhhhhhhhhhhhhhccCCCCCcccCCCCCCcccCCcchHHHHHHHHHHHHHHH
Q 014462 341 IASGIYDYYAEKQAGLLWKYNGNMLPVSFRDQETPTCLGSICYSITCGIMAGLCIIAM 398 (424)
Q Consensus 341 l~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~g~~c~~~~f~i~a~~~~~~~ 398 (424)
+.|.+.|..+ |+.+|.+.++++++++
T Consensus 350 ~~g~l~~~~g--------------------------------~~~~f~~~~~~~~~~~ 375 (377)
T TIGR00890 350 IASHALTEIG--------------------------------FEYTFIVTGAFALTSL 375 (377)
T ss_pred HHHHHHhhhc--------------------------------hhhHHHHHHHHHHHhc
Confidence 9999998776 9999999888777654
No 8
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=99.55 E-value=2e-13 Score=136.55 Aligned_cols=174 Identities=14% Similarity=0.175 Sum_probs=155.2
Q ss_pred HHHHHHHHHHHHhhhhHHHHHhcHHHHHHHcCCCchhH--HHHHHHHHhhhhhhhhhhhhhhhhhcccCchhHHHHHHHH
Q 014462 194 ADFLLLFFSLVLASGSGLTVIDNLGQICQSLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQV 271 (424)
Q Consensus 194 ~~fwll~~~~~~~~~~~~~~~~~l~~i~~~~g~s~~~~--~~sl~si~~~~gr~~~G~lsd~~g~k~~~~r~~~l~~~~~ 271 (424)
...+.+..+.|+.....+....-+|++.+++|.|...+ .++.++.+..++.++...+.||+.||+.+ ...+.
T Consensus 13 ~~l~aLa~~~F~igttEfv~~gLLp~iA~dl~vs~~~aG~lis~yAl~~ai~ap~l~~lt~r~~Rr~lL------l~~l~ 86 (394)
T COG2814 13 LALLALALAAFAIGTTEFVPVGLLPPIAADLGVSEGAAGQLITAYALGVALGAPLLALLTGRLERRRLL------LGLLA 86 (394)
T ss_pred HHHHHHHHHHHHHHhHHHHHHhchHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcccchHHHH------HHHHH
Confidence 34577778888888888888999999999999998765 99999999999999999999999988755 66667
Q ss_pred HHHHHHHHHH-hchhHHHHHHHHHHHHHhhhhHhHHHHHHHHhhCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh
Q 014462 272 VMAFALLYYA-IGWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIASGIYDYYA 350 (424)
Q Consensus 272 ~~~~~~ll~~-~~~~~~l~~~~~l~G~~~G~~~~~~~~~~se~fg~~~~g~~~g~~~~~~~lgs~l~~~~l~g~l~d~~~ 350 (424)
++.++.++.+ ..+...+.++.++.|++.|.+|++..++++++.|+++++++.++++++..++..+ |.+++.++-|..|
T Consensus 87 lFi~~n~l~alAp~f~~Ll~aR~~~g~a~G~f~~i~~~~a~~lvpp~~~~~Aiaiv~~G~tlA~v~-GvPLGt~ig~~~G 165 (394)
T COG2814 87 LFIVSNLLSALAPSFAVLLLARALAGLAHGVFWSIAAALAARLVPPGKRGRALALVFTGLTLATVL-GVPLGTFLGQLFG 165 (394)
T ss_pred HHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccchhhHHHHHHHHHHHHHHH-hccHHHHHHHHhh
Confidence 7778887766 4567789999999999999999999999999999999999999999999999997 9999999999988
Q ss_pred hhhhhhhhhccCCCCCcccCCCCCCcccCCcchHHHHHHHHHHHHHHHHHHHHHhh
Q 014462 351 EKQAGLLWKYNGNMLPVSFRDQETPTCLGSICYSITCGIMAGLCIIAMVMSLIVVH 406 (424)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~~~~~~~~~c~g~~c~~~~f~i~a~~~~~~~~l~~~l~~ 406 (424)
||.+|++.+++++++.+..+....
T Consensus 166 --------------------------------WR~~F~~ia~l~ll~~~~~~~~lP 189 (394)
T COG2814 166 --------------------------------WRATFLAIAVLALLALLLLWKLLP 189 (394)
T ss_pred --------------------------------HHHHHHHHHHHHHHHHHHHHHhCC
Confidence 999999999999998877776655
No 9
>PRK10504 putative transporter; Provisional
Probab=99.54 E-value=3.8e-13 Score=139.19 Aligned_cols=176 Identities=16% Similarity=0.240 Sum_probs=144.0
Q ss_pred hHHHHHHHHHHHHhhhhHHHHHhcHHHHHHHcCCCchhH--HHHHHHHHhhhhhhhhhhhhhhhhhcccCchhHHHHHHH
Q 014462 193 KADFLLLFFSLVLASGSGLTVIDNLGQICQSLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQ 270 (424)
Q Consensus 193 ~~~fwll~~~~~~~~~~~~~~~~~l~~i~~~~g~s~~~~--~~sl~si~~~~gr~~~G~lsd~~g~k~~~~r~~~l~~~~ 270 (424)
.+.+|.++.+.++.......+...+|.+.+++|.+..+. ..+...++..++.+.+|+++||+|||+.. ..+.
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~------~~~~ 82 (471)
T PRK10504 9 RWQLWIVAFGFFMQSLDTTIVNTALPSMAQSLGESPLHMHMVIVSYVLTVAVMLPASGWLADRVGVRNIF------FTAI 82 (471)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHH------HHHH
Confidence 346788888888887777777888999999999987653 67788888999999999999999998654 3444
Q ss_pred HHHHHHHHHHH-hchhHHHHHHHHHHHHHhhhhHhHHHHHHHHhhCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 014462 271 VVMAFALLYYA-IGWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIASGIYDYY 349 (424)
Q Consensus 271 ~~~~~~~ll~~-~~~~~~l~~~~~l~G~~~G~~~~~~~~~~se~fg~~~~g~~~g~~~~~~~lgs~l~~~~l~g~l~d~~ 349 (424)
++++++.++.. ..+.+.+++..++.|++.|..++...+.+.|.+|.+++++++++......+|..+ +|.+.|.+.|..
T Consensus 83 ~~~~~~~~~~~~~~~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-g~~~~g~l~~~~ 161 (471)
T PRK10504 83 VLFTLGSLFCALSGTLNELLLARVLQGVGGAMMVPVGRLTVMKIVPREQYMAAMTFVTLPGQVGPLL-GPALGGLLVEYA 161 (471)
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHhhhHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHh-hhHHHHHHHhhc
Confidence 45555544433 3456677888999999999999999999999999999999999999999999987 999999998876
Q ss_pred hhhhhhhhhhccCCCCCcccCCCCCCcccCCcchHHHHHHHHHHHHHHHHHHHHHhhh
Q 014462 350 AEKQAGLLWKYNGNMLPVSFRDQETPTCLGSICYSITCGIMAGLCIIAMVMSLIVVHR 407 (424)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~~~~~~~~~c~g~~c~~~~f~i~a~~~~~~~~l~~~l~~~ 407 (424)
+ |++.|.+...++.++.++......+
T Consensus 162 g--------------------------------w~~~f~~~~~~~~l~~~~~~~~~~~ 187 (471)
T PRK10504 162 S--------------------------------WHWIFLINIPVGIIGAIATLMLMPN 187 (471)
T ss_pred c--------------------------------HHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 5 9999999988888777766655433
No 10
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=99.53 E-value=5.3e-12 Score=128.01 Aligned_cols=183 Identities=11% Similarity=0.029 Sum_probs=136.5
Q ss_pred hhhhHHHHHHHHHHHHhhhhHHHHHhcHHHHHHHcCCCchhH--HHHHHHHHhhhhhhhhhhhhhhhhhcccCchhHHHH
Q 014462 190 ALMKADFLLLFFSLVLASGSGLTVIDNLGQICQSLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMA 267 (424)
Q Consensus 190 ~l~~~~fwll~~~~~~~~~~~~~~~~~l~~i~~~~g~s~~~~--~~sl~si~~~~gr~~~G~lsd~~g~k~~~~r~~~l~ 267 (424)
.++++++|.+.+.+++.......+.+++|++.+++|.+..+. +.+++++++.+|++..|++.||+++|+.. .
T Consensus 201 ~l~~~~~~~l~~~~~~~~~~~~~~~~~lp~~l~~~g~s~~~ag~~~~~~~i~~i~g~~~~g~l~~r~~~~~~~------~ 274 (393)
T PRK09705 201 VVFTPRAWTLGVYFGLINGGYASLIAWLPAFYIEIGASAQYSGSLLALMTLGQAAGALLMPAMARHQDRRKLL------M 274 (393)
T ss_pred cccCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHHHHHHhhccchHHH------H
Confidence 456778888877777666666778889999998899887644 88899999999999999999999987543 3
Q ss_pred HHHHHHHHHHHHHHhchhHHHHHHHHHHHHHhhhhHhHHHHHHHHhhC-cchhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 014462 268 VAQVVMAFALLYYAIGWPGEIYVTTVLVGLSYGAHWAIVPAAASELFG-LKSFGALYNFLTLASPAGSLIFSGVIASGIY 346 (424)
Q Consensus 268 ~~~~~~~~~~ll~~~~~~~~l~~~~~l~G~~~G~~~~~~~~~~se~fg-~~~~g~~~g~~~~~~~lgs~l~~~~l~g~l~ 346 (424)
++..+.+++.+++.........+..++.|++.|..++.....+.+.++ .+++|+.+|+.+....+++.+ +|.+.|++.
T Consensus 275 ~~~~l~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~-gp~~~G~l~ 353 (393)
T PRK09705 275 LALVLQLVGFCGFIWLPLQLPVLWAMVCGLGLGGAFPLCLLLALDHSVQPAIAGKLVAFMQGIGFIIAGL-APWFSGVLR 353 (393)
T ss_pred HHHHHHHHHHHHHHHccchHHHHHHHHHHHhccchHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHH
Confidence 344444444443321111111123456688888887777777777775 568999999999999999987 999999999
Q ss_pred hhhhhhhhhhhhhccCCCCCcccCCCCCCcccCCcchHHHHHHHHHHHHHHHHHHHHHhhhhhH
Q 014462 347 DYYAEKQAGLLWKYNGNMLPVSFRDQETPTCLGSICYSITCGIMAGLCIIAMVMSLIVVHRTKS 410 (424)
Q Consensus 347 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~g~~c~~~~f~i~a~~~~~~~~l~~~l~~~~~~ 410 (424)
|..| .|...|.+.+++++++.+..+.+..+++.
T Consensus 354 ~~~g-------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 386 (393)
T PRK09705 354 SISG-------------------------------NYLMDWAFHALCVVGLMIITLRFAPARFP 386 (393)
T ss_pred HHhC-------------------------------CchHHHHHHHHHHHHHHHHHHHhcccccc
Confidence 9876 28899999998888887777666555543
No 11
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=99.52 E-value=4.1e-13 Score=140.29 Aligned_cols=182 Identities=22% Similarity=0.294 Sum_probs=156.1
Q ss_pred HHhhhhHHHHHHHHHHHHhhhhHHHHHhcHHHHHHHcCCCchhH--HHHHHHHHhhhhhhhhhhhhhhhhhcccCchhHH
Q 014462 188 PQALMKADFLLLFFSLVLASGSGLTVIDNLGQICQSLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVA 265 (424)
Q Consensus 188 ~~~l~~~~fwll~~~~~~~~~~~~~~~~~l~~i~~~~g~s~~~~--~~sl~si~~~~gr~~~G~lsd~~g~k~~~~r~~~ 265 (424)
+++++++.|+.+.+...+...........+|.+.+++|+++..+ ++++.++.+.+||++.|+++|+...++. ..
T Consensus 292 ~~ll~~~~fl~~~~~~~~~~~g~~~p~~~l~~~~~~~g~~~~~aa~l~Siigi~~i~gRi~~G~laD~~~~~~~----~~ 367 (509)
T KOG2504|consen 292 LSLLKDPKFLLLALSNLFAYLGFNVPFVYLPSYAKSLGLSSNDAAFLLSIIGVSDIIGRIILGLLADKPGIRAL----VL 367 (509)
T ss_pred HHHHcCchHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCChhhhHHHHHHHHHhhhhhhhhhhhhcCccccchH----HH
Confidence 57999999999999999998888888889999999999998765 9999999999999999999999974332 34
Q ss_pred HHHHHHHHHHHHHHHH-hchhHHHHHHHHHHHHHhhhhHhHHHHHHHHhhCcchhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 014462 266 MAVAQVVMAFALLYYA-IGWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIASG 344 (424)
Q Consensus 266 l~~~~~~~~~~~ll~~-~~~~~~l~~~~~l~G~~~G~~~~~~~~~~se~fg~~~~g~~~g~~~~~~~lgs~l~~~~l~g~ 344 (424)
..++.+..+++.+... ..+.+.++...+++|++.|...+..+.++.++.|.+++..++|+..+...++.++ ||+++|.
T Consensus 368 ~~~~ll~~gl~~~~~p~~~~~~~l~~~~~~fG~~~g~~~~l~~~i~~~~~g~~~l~~a~Gl~l~~~gi~~l~-gpPiag~ 446 (509)
T KOG2504|consen 368 FLLTLLIAGLARLFLPFATTYVGLIVFSILFGFCVGSFSSLTPVILVDLVGLEKLSNAYGLLLLFQGIGALV-GPPIAGL 446 (509)
T ss_pred HHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChhhcchHHHHHHHHhHHHHHc-Cccccee
Confidence 4555666666654444 3456788999999999999999999999999999999999999999999999998 9999999
Q ss_pred HHhhhhhhhhhhhhhccCCCCCcccCCCCCCcccCCcchHHHHHHHHHHHHHHHHHHHHHh
Q 014462 345 IYDYYAEKQAGLLWKYNGNMLPVSFRDQETPTCLGSICYSITCGIMAGLCIIAMVMSLIVV 405 (424)
Q Consensus 345 l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~g~~c~~~~f~i~a~~~~~~~~l~~~l~ 405 (424)
++|..+ .|..+|+..+...+++..+.++..
T Consensus 447 ~~d~tg-------------------------------~Y~~~f~~~g~~~~~s~~~~~~~~ 476 (509)
T KOG2504|consen 447 LYDITG-------------------------------NYDHAFYFCGLCFLLSAVLLLILR 476 (509)
T ss_pred eeeccC-------------------------------CeeeehhhcChHHHHHHHHHHHhH
Confidence 999887 289999999998888887666655
No 12
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=99.52 E-value=3.7e-12 Score=131.80 Aligned_cols=154 Identities=12% Similarity=0.097 Sum_probs=122.1
Q ss_pred HhhhhHHHHHHHHHHHHhhhhHHHHHhcHHHHHHH-cCCCchhH--HHHHHHHHhhhhhhhhhhhhhhhhhcccCchhHH
Q 014462 189 QALMKADFLLLFFSLVLASGSGLTVIDNLGQICQS-LGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVA 265 (424)
Q Consensus 189 ~~l~~~~fwll~~~~~~~~~~~~~~~~~l~~i~~~-~g~s~~~~--~~sl~si~~~~gr~~~G~lsd~~g~k~~~~r~~~ 265 (424)
+.++++++|...+..++...........+|++.++ +|+++.+. ......++..+++++.|++.||+++|+..
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~----- 324 (485)
T TIGR00711 250 RLFKYRNFTIGCVYMSLLGLGLYGSFYLLPLYLQQVLGYTALQAGLHILPVGLAPMLSSPIAGRMGDKIDPRKLV----- 324 (485)
T ss_pred HHHcCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcHHHH-----
Confidence 37778888887777777666667777788999877 79887654 67778899999999999999999987543
Q ss_pred HHHHHHHHHHHHHHHH--h---chhHHHHHHHHHHHHHhhhhHhHHHHHHHHhhCcchhhHHHHHHHHHHHHHHHHHHHH
Q 014462 266 MAVAQVVMAFALLYYA--I---GWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGV 340 (424)
Q Consensus 266 l~~~~~~~~~~~ll~~--~---~~~~~l~~~~~l~G~~~G~~~~~~~~~~se~fg~~~~g~~~g~~~~~~~lgs~l~~~~ 340 (424)
.++..+++++.+++. . .+.+.++...++.|++.|..+++....+.+.+|++++|.+.++.++...+|+.+ |+.
T Consensus 325 -~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~i-g~~ 402 (485)
T TIGR00711 325 -TIGLILYAVGFYWRAFTFTPDTPFLAIALPQFIRGFGMGCFFMPLTTIALSGLPPHKIARGSSLSNFTRQLGGSI-GTA 402 (485)
T ss_pred -HHHHHHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHhHHHHHHHHHHHHHHHH-HHH
Confidence 455556666655544 1 123455667888999999988888888889999999999999999999999998 999
Q ss_pred HHHHHHhhh
Q 014462 341 IASGIYDYY 349 (424)
Q Consensus 341 l~g~l~d~~ 349 (424)
+.|.++++.
T Consensus 403 i~g~~~~~~ 411 (485)
T TIGR00711 403 LITTILTNR 411 (485)
T ss_pred HHHHHHHHH
Confidence 999888753
No 13
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=99.52 E-value=6.8e-12 Score=131.20 Aligned_cols=152 Identities=11% Similarity=-0.027 Sum_probs=120.7
Q ss_pred hhhhHHHHHHHHHHHHhhhhHHHHHhcHHHHHHH-cCCCchhH--HHHHHHHHhhhhhhhhhhhhhhhhhcccCchhHHH
Q 014462 190 ALMKADFLLLFFSLVLASGSGLTVIDNLGQICQS-LGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAM 266 (424)
Q Consensus 190 ~l~~~~fwll~~~~~~~~~~~~~~~~~l~~i~~~-~g~s~~~~--~~sl~si~~~~gr~~~G~lsd~~g~k~~~~r~~~l 266 (424)
.++++.++......++...+..+....+|++.|. +|+++.++ .....+++..++.++.|++.||+++|+.+
T Consensus 255 lf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lq~v~g~s~~~ag~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~------ 328 (495)
T PRK14995 255 LFTHRIILSGVVMAMTAMITLVGFELLMAQELQFVHGLSPLEAGMFMLPVMVASGFSGPIAGILVSRLGLRLVA------ 328 (495)
T ss_pred HhCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHH------
Confidence 7778888877777777766666777788888877 79987655 77788899999999999999999986533
Q ss_pred HHHHHHHHHHHHHHHh----chhHHHHHHHHHHHHHhhhhHhHHHHHHHHhhCcchhhHHHHHHHHHHHHHHHHHHHHHH
Q 014462 267 AVAQVVMAFALLYYAI----GWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIA 342 (424)
Q Consensus 267 ~~~~~~~~~~~ll~~~----~~~~~l~~~~~l~G~~~G~~~~~~~~~~se~fg~~~~g~~~g~~~~~~~lgs~l~~~~l~ 342 (424)
..+.++++++.+++.. .+.+..+...++.|++.|...+.....+.+..|.+++|.+.++.++...+|+.+ |+.+.
T Consensus 329 ~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~G~g~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lG~~~-G~ai~ 407 (495)
T PRK14995 329 TGGMALSALSFYGLAMTDFSTQQWQAWGLMALLGFSAASALLASTSAIMAAAPPEKAAAAGAIETMAYELGAGL-GIAIF 407 (495)
T ss_pred HHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCHHhcchHHHHHHHHHHHHHHH-HHHHH
Confidence 4455555555444321 233445667888999999998888888999999999999999999999999997 99999
Q ss_pred HHHHhh
Q 014462 343 SGIYDY 348 (424)
Q Consensus 343 g~l~d~ 348 (424)
|.+++.
T Consensus 408 g~i~~~ 413 (495)
T PRK14995 408 GLLLSR 413 (495)
T ss_pred HHHHHH
Confidence 988775
No 14
>PRK11663 regulatory protein UhpC; Provisional
Probab=99.51 E-value=8.9e-13 Score=135.43 Aligned_cols=171 Identities=11% Similarity=0.154 Sum_probs=135.2
Q ss_pred HHHHHHHHHHHHhhhhHHHHHhcHHHHHHHcCCCchhH--HHHHHHHHhhhhhhhhhhhhhhhhhcccCchhHHHHHHHH
Q 014462 194 ADFLLLFFSLVLASGSGLTVIDNLGQICQSLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQV 271 (424)
Q Consensus 194 ~~fwll~~~~~~~~~~~~~~~~~l~~i~~~~g~s~~~~--~~sl~si~~~~gr~~~G~lsd~~g~k~~~~r~~~l~~~~~ 271 (424)
..++..++.+++.......+...+|++.+++|.+..+. +.+...++..++++..|+++||+|+|+.+ .++.+
T Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~r~~~------~~~~~ 96 (434)
T PRK11663 23 HILITMYLGYALFYFTRKSFNAAMPEMLADLGLSRSDIGLLATLFYITYGVSKFVSGIVSDRSNARYFM------GIGLI 96 (434)
T ss_pred HHHHHHHHHHHHHHHhhhhHHHhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhhHHHhhcCCchhH------HHHHH
Confidence 34445555555555545556667899999999987654 88899999999999999999999998755 55566
Q ss_pred HHHHHHHHHH-hchhHHHHHHHHHHHHHhhhhHhHHHHHHHHhhCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh
Q 014462 272 VMAFALLYYA-IGWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIASGIYDYYA 350 (424)
Q Consensus 272 ~~~~~~ll~~-~~~~~~l~~~~~l~G~~~G~~~~~~~~~~se~fg~~~~g~~~g~~~~~~~lgs~l~~~~l~g~l~d~~~ 350 (424)
+.+++.+++. ..+.+.+++..++.|++.|..++....++.++|+++++|+..++.+.+..+|+.+ ++.+.|.+.+..+
T Consensus 97 ~~~~~~~~~~~~~~~~~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~-~~~~~~~l~~~~g 175 (434)
T PRK11663 97 ATGIINILFGFSSSLWAFALLWVLNAFFQGWGWPVCAKLLTAWYSRTERGGWWAIWNTAHNVGGAL-IPLVVGAIALHYG 175 (434)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHHHHHccchHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHccc
Confidence 6666655554 3445667777888899999988999999999999999999999999999999997 8999999988766
Q ss_pred hhhhhhhhhccCCCCCcccCCCCCCcccCCcchHHHHHHHHHHHHHHHHHHHH
Q 014462 351 EKQAGLLWKYNGNMLPVSFRDQETPTCLGSICYSITCGIMAGLCIIAMVMSLI 403 (424)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~~~~~~~~~c~g~~c~~~~f~i~a~~~~~~~~l~~~ 403 (424)
|+++|++.+.++++..+...+
T Consensus 176 --------------------------------w~~~f~~~~i~~~~~~~~~~~ 196 (434)
T PRK11663 176 --------------------------------WRYGMMIAGIIAIVVGLFLCW 196 (434)
T ss_pred --------------------------------HHHHHHHHHHHHHHHHHHHHH
Confidence 999999988877655444433
No 15
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.51 E-value=4.1e-13 Score=138.96 Aligned_cols=201 Identities=16% Similarity=0.151 Sum_probs=145.4
Q ss_pred HhhhhHHHHHHHHHHHHhhhhHHHHHhcHHHHHHHcCCCchhH--HHHHHHHHhhhhhhhhhhhhhhhhhcccCchhHHH
Q 014462 189 QALMKADFLLLFFSLVLASGSGLTVIDNLGQICQSLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAM 266 (424)
Q Consensus 189 ~~l~~~~fwll~~~~~~~~~~~~~~~~~l~~i~~~~g~s~~~~--~~sl~si~~~~gr~~~G~lsd~~g~k~~~~r~~~l 266 (424)
+.++++.+|......++...+......+++++.+++|++.... +.++.++++.++++++|+++||...++. |...+
T Consensus 236 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~--~~~~~ 313 (455)
T TIGR00892 236 SLFTHRGFLVYLSGNVIMFLGFFAPIIFLVPYAKDKGVDEYEAAFLLSIIGFVDIFARPSCGLIAGLKWIRPH--VQYLF 313 (455)
T ss_pred HHhcCchHHHHHHHHHHHHHHccchHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCHH--HHHHH
Confidence 5788999998888777766666666778899998899986654 7888899999999999999997422111 11122
Q ss_pred HHHHHHHHHHHHHHH-hchhHHHHHHHHHHHHHhhhhHhHHHHHHHHhhCcchhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 014462 267 AVAQVVMAFALLYYA-IGWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIASGI 345 (424)
Q Consensus 267 ~~~~~~~~~~~ll~~-~~~~~~l~~~~~l~G~~~G~~~~~~~~~~se~fg~~~~g~~~g~~~~~~~lgs~l~~~~l~g~l 345 (424)
..+.++.+++.++.. ..+.+.+++..++.|+++|..++...+++.|.+|.+++|+.+++.++...+|+.+ +|.++|.+
T Consensus 314 ~~~~~~~~l~~ll~~~~~~~~~~~i~~~~~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~i-gp~i~G~l 392 (455)
T TIGR00892 314 SFALLFNGLTHLLCALAGDYTGLVIYCIFFGLSFGSVGALLFEVLMDLVGAQRFSSAVGLVTIVECCAVLI-GPPLAGRL 392 (455)
T ss_pred HHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHhchHHHHHHHHHHHHhhHHHHhhHHhHHHHHHHHHHHc-cccceeee
Confidence 222333333333332 3445667778889999999999999999999999999999999999999999998 99999999
Q ss_pred HhhhhhhhhhhhhhccCCCCCcccCCCCCCcccCCcchHHHHHHHHHHHHHHHHH----HHHHhhhhhHHHH-HHhhhcc
Q 014462 346 YDYYAEKQAGLLWKYNGNMLPVSFRDQETPTCLGSICYSITCGIMAGLCIIAMVM----SLIVVHRTKSVYA-QLYGNLN 420 (424)
Q Consensus 346 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~g~~c~~~~f~i~a~~~~~~~~l----~~~l~~~~~~~~~-~~~~~~~ 420 (424)
+|..+ .|+..|++.+++.+++.+. .++.++++||.++ .+.+.+-
T Consensus 393 ~~~~g-------------------------------~~~~~f~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 441 (455)
T TIGR00892 393 VDATK-------------------------------NYKYIFYASGSIVVSAGLFLAIGNYINYRLLAKEQKAALEREGA 441 (455)
T ss_pred ehhcC-------------------------------CcchHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccc
Confidence 98765 1888888888777766542 3333444455443 4555444
Q ss_pred cCC
Q 014462 421 RSN 423 (424)
Q Consensus 421 ~~~ 423 (424)
||+
T Consensus 442 ~~~ 444 (455)
T TIGR00892 442 RDK 444 (455)
T ss_pred ccc
Confidence 443
No 16
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.50 E-value=4.8e-12 Score=128.10 Aligned_cols=171 Identities=14% Similarity=0.092 Sum_probs=128.1
Q ss_pred HHHHHHHHHhhhhHHHHHhcHHHHHHHcCCCchhH--HHHHHHHHhhhhhhhhhhhhhhhhhcccCchhHHHHHHHHHHH
Q 014462 197 LLLFFSLVLASGSGLTVIDNLGQICQSLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVMA 274 (424)
Q Consensus 197 wll~~~~~~~~~~~~~~~~~l~~i~~~~g~s~~~~--~~sl~si~~~~gr~~~G~lsd~~g~k~~~~r~~~l~~~~~~~~ 274 (424)
+.++...++.......+.+++|++.++.|++.... ..+...+++.+|++..|+++||+++|+.. .+..+.++
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~------~~~~~~~~ 296 (406)
T PRK11551 223 LLLWISYFFTLIVLYFLLNWLPSLLVGQGLSRSQAGLVQIAFNIGGALGSLLIGALMDRLRPRRVV------LLIYAGIL 296 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHH------HHHHHHHH
Confidence 34444444444555566778999999999886543 77788899999999999999999987644 22333333
Q ss_pred HHHHHHH-hchhHHHHHHHHHHHHHhhhhHhHHHHHHHHhhCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhh
Q 014462 275 FALLYYA-IGWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIASGIYDYYAEKQ 353 (424)
Q Consensus 275 ~~~ll~~-~~~~~~l~~~~~l~G~~~G~~~~~~~~~~se~fg~~~~g~~~g~~~~~~~lgs~l~~~~l~g~l~d~~~~~~ 353 (424)
++.+.+. ..+.+.+++..++.|++.++..+..++++.|.+|.+++|+..|+.+....+|+.+ +|.++|.++|..+
T Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~-g~~~~g~l~~~~~--- 372 (406)
T PRK11551 297 ASLAALAAAPSFAGMLLAGFAAGLFVVGGQSVLYALAPLFYPTQVRGTGVGAAVAVGRLGSMA-GPLLAGQLLALGR--- 372 (406)
T ss_pred HHHHHHHhcCcHHHHHHHHHHHHHHHHhHHHHHHHHHHHHcchhhhhhhhhHHHHhhhHHHHH-HhhhHhhhhccCC---
Confidence 3433333 3344556667778888888888889999999999999999999999999999997 9999999998754
Q ss_pred hhhhhhccCCCCCcccCCCCCCcccCCcchHHHHHHHHHHHHHHHHHHHHHh
Q 014462 354 AGLLWKYNGNMLPVSFRDQETPTCLGSICYSITCGIMAGLCIIAMVMSLIVV 405 (424)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~~~~~~c~g~~c~~~~f~i~a~~~~~~~~l~~~l~ 405 (424)
.|...+.+.+.+.+++.++++.+.
T Consensus 373 ----------------------------~~~~~~~~~~~~~~~~~~~~~~~~ 396 (406)
T PRK11551 373 ----------------------------STVGVIGASIPVILVAALAALLLV 396 (406)
T ss_pred ----------------------------chHHHHHHHHHHHHHHHHHHHHHh
Confidence 177778777777777766665543
No 17
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.50 E-value=8e-13 Score=130.48 Aligned_cols=170 Identities=11% Similarity=-0.013 Sum_probs=132.4
Q ss_pred HHHHHHHHHhhhhHHHHHhcHHHHHHHcCCCchhH--HHHHHHHHhhhhhhhhhhhhhhhhhcccCchhHHHHHHHHHHH
Q 014462 197 LLLFFSLVLASGSGLTVIDNLGQICQSLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVMA 274 (424)
Q Consensus 197 wll~~~~~~~~~~~~~~~~~l~~i~~~~g~s~~~~--~~sl~si~~~~gr~~~G~lsd~~g~k~~~~r~~~l~~~~~~~~ 274 (424)
|.++.+.++...........+|.+..+.+.+..+. +.+...++..++.+.+|+++||+|||+.+ ..+.++.+
T Consensus 2 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~g~r~~~------~~~~~~~~ 75 (365)
T TIGR00900 2 RLLFAAQLISLIGTAITQVALPLYVLAGTGSASVLSLAALAGMLPYVVLSPIAGALADRYDRKKVM------IGADLIRA 75 (365)
T ss_pred eehHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhhHHHHhhchhHHH------HHHHHHHH
Confidence 44555555555555555566788888888887654 88889999999999999999999998754 44444444
Q ss_pred HHHHHHH-hc-----hhHHHHHHHHHHHHHhhhhHhHHHHHHHHhhCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 014462 275 FALLYYA-IG-----WPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIASGIYDY 348 (424)
Q Consensus 275 ~~~ll~~-~~-----~~~~l~~~~~l~G~~~G~~~~~~~~~~se~fg~~~~g~~~g~~~~~~~lgs~l~~~~l~g~l~d~ 348 (424)
++.+++. .. +.+.+++..++.|++.+...+...++++|+++.+++++.+++.+....+|..+ +|.+++.+.+.
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-g~~l~~~l~~~ 154 (365)
T TIGR00900 76 VLVAVLPFVALLGGLNIWQVYVLAGILAIAQAFFTPAYQAMLPDLVPEEQLTQANSLSQAVRSLFYIV-GPGIGGLMYAT 154 (365)
T ss_pred HHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHhHHHHHHHHHHHH-HHHHHHHHHHH
Confidence 4333322 22 56678888999999999999999999999999999999999999999999997 99999999887
Q ss_pred hhhhhhhhhhhccCCCCCcccCCCCCCcccCCcchHHHHHHHHHHHHHHHHHHHHHh
Q 014462 349 YAEKQAGLLWKYNGNMLPVSFRDQETPTCLGSICYSITCGIMAGLCIIAMVMSLIVV 405 (424)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~g~~c~~~~f~i~a~~~~~~~~l~~~l~ 405 (424)
.+ |++.|++.+..++++.+....+.
T Consensus 155 ~g--------------------------------~~~~~~~~~~~~~~~~~~~~~~~ 179 (365)
T TIGR00900 155 LG--------------------------------IKWAIWVDAVGFAISALLIVSVR 179 (365)
T ss_pred hh--------------------------------HHHHHHHHHHHHHHHHHHHHhcc
Confidence 76 99999988887776665554443
No 18
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=99.49 E-value=4.7e-12 Score=130.17 Aligned_cols=186 Identities=16% Similarity=0.155 Sum_probs=130.4
Q ss_pred hhhhHHHHHHHHHHHHhhhhHHHHHhcHHHHHHH-cCCCchhH--HHHHHHHHhhhhhhhhhhhhhhhhhcccCchhHHH
Q 014462 190 ALMKADFLLLFFSLVLASGSGLTVIDNLGQICQS-LGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAM 266 (424)
Q Consensus 190 ~l~~~~fwll~~~~~~~~~~~~~~~~~l~~i~~~-~g~s~~~~--~~sl~si~~~~gr~~~G~lsd~~g~k~~~~r~~~l 266 (424)
.++++.+|.+.+..++.....+++..++|+++++ .|++.... +.+++++.+.+|++++|+++||+++++... ..
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~---~~ 323 (438)
T TIGR00712 247 VLPNKLLWYIAIANVFVYLLRYGVLDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFKGNRGA---TG 323 (438)
T ss_pred HccCchHHHHHHHHHHHHHHHHHHHHhHHHHHHHccCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhccCcccH---HH
Confidence 6788899998887777766667777899999987 68886543 677888999999999999999997654331 11
Q ss_pred HHHHHHHHHHHHHHHh---chhHHHHHHHHHHHHHhhhhHhHHHHHHHHhhCcchhhHHHHHHHHHHHHHHHHHHHHHHH
Q 014462 267 AVAQVVMAFALLYYAI---GWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIAS 343 (424)
Q Consensus 267 ~~~~~~~~~~~ll~~~---~~~~~l~~~~~l~G~~~G~~~~~~~~~~se~fg~~~~g~~~g~~~~~~~lgs~l~~~~l~g 343 (424)
........++.+++.. .+.+..+...++.|++..+........+.|.+|.+++|++.|+.+....+|+.+.+|.+.|
T Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~gg~~~gp~l~G 403 (438)
T TIGR00712 324 VFFMTLVTIAVIVYWMNPAGNPLVDMICMIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVG 403 (438)
T ss_pred HHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHccHHHHHHHHHHHhcChhheeeehhhhchHHHhhhhhhcchhHH
Confidence 1111111122222221 1223333344445554333222333567899999999999999998888876434899999
Q ss_pred HHHhhhhhhhhhhhhhccCCCCCcccCCCCCCcccCCcchHHHHHHHHHHHHHHHHHHHHHhhhhhH
Q 014462 344 GIYDYYAEKQAGLLWKYNGNMLPVSFRDQETPTCLGSICYSITCGIMAGLCIIAMVMSLIVVHRTKS 410 (424)
Q Consensus 344 ~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~g~~c~~~~f~i~a~~~~~~~~l~~~l~~~~~~ 410 (424)
.+.|..+ |..+|++++++++++.+..+.+.++.||
T Consensus 404 ~l~~~~g--------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 438 (438)
T TIGR00712 404 YTVDFFG--------------------------------WDGGFMVMIGGSILAVILLIVVMIGEKR 438 (438)
T ss_pred HHHHhcc--------------------------------chHHHHHHHHHHHHHHHHHHHHHhhccC
Confidence 9999776 9999999999999988888877766553
No 19
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=99.49 E-value=2.1e-12 Score=128.43 Aligned_cols=190 Identities=16% Similarity=0.180 Sum_probs=147.2
Q ss_pred hhhhHHHHHHHHHHHHhhhhHHHHHhcHHHHHHH-cCCCchhH--HHHHHHHHhhhhhhhhhhhhhhhhhcccCchhHHH
Q 014462 190 ALMKADFLLLFFSLVLASGSGLTVIDNLGQICQS-LGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAM 266 (424)
Q Consensus 190 ~l~~~~fwll~~~~~~~~~~~~~~~~~l~~i~~~-~g~s~~~~--~~sl~si~~~~gr~~~G~lsd~~g~k~~~~r~~~l 266 (424)
+++|+..|++.++.++....-+++.+|.|.++.+ .|++..++ ..+++=++...|.+++||+|||+-+.|+.|--
T Consensus 248 VL~Nk~iW~la~a~vfvYivR~gi~dW~p~YL~e~k~~s~~~a~~a~~lfE~agl~G~Ll~GwlSDklfkgrR~p~~--- 324 (448)
T COG2271 248 VLKNKLIWLLALANVFVYVVRYGINDWGPLYLSEVKGFSLVKANWAISLFEVAGLPGTLLAGWLSDKLFKGRRGPMA--- 324 (448)
T ss_pred HHcChHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhcCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcccccchHH---
Confidence 7889999999999999999999999999999866 79987654 88999999999999999999999755554322
Q ss_pred HHHHHHHHHHHHHHHh---chhHHHHHHHHHHHHH-hhhhHhHHHHHHHHhhCcchhhHHHHHHHHHHHHHHHHHHHHHH
Q 014462 267 AVAQVVMAFALLYYAI---GWPGEIYVTTVLVGLS-YGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIA 342 (424)
Q Consensus 267 ~~~~~~~~~~~ll~~~---~~~~~l~~~~~l~G~~-~G~~~~~~~~~~se~fg~~~~g~~~g~~~~~~~lgs~l~~~~l~ 342 (424)
.+.++.+.++...+.. .+.....+..+++|+. +|-+ -+.-..+.|..|++--|++.|+......+++..++....
T Consensus 325 ~i~~~~i~~~~~~~w~~~~~~~~l~~~~l~~iGf~IyGPq-mLiGl~a~e~~pK~AaGtA~Gf~Glf~Yl~Ga~~a~~~~ 403 (448)
T COG2271 325 LIFMLLITASLVLYWLAPNGSYLLDAILLFIIGFLIYGPQ-MLIGLAAAEFVPKKAAGTATGFVGLFAYLIGAALAGLPL 403 (448)
T ss_pred HHHHHHHHHHHHHHHcCCCccHHHHHHHHHHHHHHHhhHH-HHHHHHHhccccHhhccchhchhhhHHHHhhHHhcCCcc
Confidence 2222333333333322 2335556677888876 5555 677888899999999999999999999994444588888
Q ss_pred HHHHhhhhhhhhhhhhhccCCCCCcccCCCCCCcccCCcchHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHH
Q 014462 343 SGIYDYYAEKQAGLLWKYNGNMLPVSFRDQETPTCLGSICYSITCGIMAGLCIIAMVMSLIVVHRTKSVYAQL 415 (424)
Q Consensus 343 g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~g~~c~~~~f~i~a~~~~~~~~l~~~l~~~~~~~~~~~ 415 (424)
|++.|.+| |...|+++.+.++++.++.+.+..++++.+++.
T Consensus 404 g~i~d~~g--------------------------------W~g~Fi~~~~~a~l~~lll~~~~~~~~~~~~~~ 444 (448)
T COG2271 404 GYIADTWG--------------------------------WDGGFIVLSIAALLAILLLLPVWNAEERKIRDE 444 (448)
T ss_pred eeeEecCC--------------------------------CcchHHHHHHHHHHHHHHHHHHHhhcchhhhhh
Confidence 98888866 999999999999988888777776666655544
No 20
>PRK03545 putative arabinose transporter; Provisional
Probab=99.49 E-value=1.5e-12 Score=131.56 Aligned_cols=170 Identities=11% Similarity=0.121 Sum_probs=133.5
Q ss_pred HHHHHHHHHHhhhhHHHHHhcHHHHHHHcCCCchhH--HHHHHHHHhhhhhhhhhhhhhhhhhcccCchhHHHHHHHHHH
Q 014462 196 FLLLFFSLVLASGSGLTVIDNLGQICQSLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVM 273 (424)
Q Consensus 196 fwll~~~~~~~~~~~~~~~~~l~~i~~~~g~s~~~~--~~sl~si~~~~gr~~~G~lsd~~g~k~~~~r~~~l~~~~~~~ 273 (424)
+|.+.+..++...........+|++.+++|.+..+. ..+...++..++.+..|++.||+|||+.+ ..+.++.
T Consensus 11 ~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~------~~~~~~~ 84 (390)
T PRK03545 11 VVTLALAAFIFNTTEFVPVGLLSDIAQSFHMQTAQVGLMLTIYAWVVALMSLPLMLLTSNVERRKLL------IGLFVLF 84 (390)
T ss_pred HHHHHHHHHHHHhHHHHHHcchHHHHhHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHH------HHHHHHH
Confidence 444444443332222223345789999999988765 78888889999999999999999998755 5556666
Q ss_pred HHHHHHHH-hchhHHHHHHHHHHHHHhhhhHhHHHHHHHHhhCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhh
Q 014462 274 AFALLYYA-IGWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIASGIYDYYAEK 352 (424)
Q Consensus 274 ~~~~ll~~-~~~~~~l~~~~~l~G~~~G~~~~~~~~~~se~fg~~~~g~~~g~~~~~~~lgs~l~~~~l~g~l~d~~~~~ 352 (424)
+++.++.. ..+.+.+++..++.|++.+..++...+++.++++.++|+++.|+...+..+|..+ +|.+.+.+.+..+
T Consensus 85 ~~~~~~~~~~~~~~~l~~~r~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~g~~~~~~~~g~~i-g~~l~~~l~~~~g-- 161 (390)
T PRK03545 85 IASHVLSALAWNFTVLLISRIGIAFAHAIFWSITASLAIRVAPAGKKAQALSLLATGTALAMVL-GLPLGRVIGQYLG-- 161 (390)
T ss_pred HHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhhhhhHHHHHHHHHHHHHHH-HhhHHHHHHHHhc--
Confidence 66655554 4567778888899999999888999999999999999999999999999999997 8999999887766
Q ss_pred hhhhhhhccCCCCCcccCCCCCCcccCCcchHHHHHHHHHHHHHHHHHHHHH
Q 014462 353 QAGLLWKYNGNMLPVSFRDQETPTCLGSICYSITCGIMAGLCIIAMVMSLIV 404 (424)
Q Consensus 353 ~~~~~~~~~~~~~~~~~~~~~~~~c~g~~c~~~~f~i~a~~~~~~~~l~~~l 404 (424)
|+++|++.++++++..+.....
T Consensus 162 ------------------------------w~~~f~~~~~~~~l~~~~~~~~ 183 (390)
T PRK03545 162 ------------------------------WRTTFLAIGGGALITLLLLIKL 183 (390)
T ss_pred ------------------------------HHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999887776555443
No 21
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=99.49 E-value=2.1e-12 Score=131.14 Aligned_cols=151 Identities=13% Similarity=0.179 Sum_probs=126.3
Q ss_pred HHHHhcHHHHHHHcCCCchhH--HHHHHHHHhhhhhhhhhhhhhhhhhcccCchhHHHHHHHHHHHHHHHHHH-hchhHH
Q 014462 211 LTVIDNLGQICQSLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVMAFALLYYA-IGWPGE 287 (424)
Q Consensus 211 ~~~~~~l~~i~~~~g~s~~~~--~~sl~si~~~~gr~~~G~lsd~~g~k~~~~r~~~l~~~~~~~~~~~ll~~-~~~~~~ 287 (424)
+.....+|++.+++|.+..+. .++...++..++++..|.++||+|||+.+ ..+.++.+++.++.. ..+.+.
T Consensus 37 ~~~~~~l~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~grr~~~------~~~~~~~~~~~~~~~~~~~~~~ 110 (394)
T PRK10213 37 FLPVSLLTPMAQDLGISEGVAGQSVTVTAFVAMFASLFITQTIQATDRRYVV------ILFAVLLTLSCLLVSFANSFSL 110 (394)
T ss_pred HHHHhhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcHHHH------HHHHHHHHHHHHHHHHHChHHH
Confidence 344456888889999988754 77889999999999999999999998755 555666666655544 455778
Q ss_pred HHHHHHHHHHHhhhhHhHHHHHHHHhhCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhccCCCCCc
Q 014462 288 IYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIASGIYDYYAEKQAGLLWKYNGNMLPV 367 (424)
Q Consensus 288 l~~~~~l~G~~~G~~~~~~~~~~se~fg~~~~g~~~g~~~~~~~lgs~l~~~~l~g~l~d~~~~~~~~~~~~~~~~~~~~ 367 (424)
+++..++.|++.|..++...++++|+++.|+++++.++...+..+|..+ +|.+++.+.+..+
T Consensus 111 l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~g~~i-g~~l~~~l~~~~g----------------- 172 (394)
T PRK10213 111 LLIGRACLGLALGGFWAMSASLTMRLVPPRTVPKALSVIFGAVSIALVI-AAPLGSFLGELIG----------------- 172 (394)
T ss_pred HHHHHHHHHHhhHHHHHHHHHHHHHHcCHhHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhhcC-----------------
Confidence 8899999999999999999999999999999999999999999999997 9999999988766
Q ss_pred ccCCCCCCcccCCcchHHHHHHHHHHHHHHHHH
Q 014462 368 SFRDQETPTCLGSICYSITCGIMAGLCIIAMVM 400 (424)
Q Consensus 368 ~~~~~~~~~c~g~~c~~~~f~i~a~~~~~~~~l 400 (424)
|++.|++.+.++++..+.
T Consensus 173 ---------------w~~~f~~~~~l~~~~~l~ 190 (394)
T PRK10213 173 ---------------WRNVFNAAAVMGVLCIFW 190 (394)
T ss_pred ---------------HHHHHHHHHHHHHHHHHH
Confidence 999999988776655433
No 22
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=99.48 E-value=4.6e-13 Score=131.66 Aligned_cols=164 Identities=18% Similarity=0.246 Sum_probs=131.4
Q ss_pred HHHHHhhhhHHHHHhcHH-HHHHHcCCCchhH--HHHHHHHHhhhhhhhhhhhhhhhhhcccCchhHHHHHHHHHHHHHH
Q 014462 201 FSLVLASGSGLTVIDNLG-QICQSLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVMAFAL 277 (424)
Q Consensus 201 ~~~~~~~~~~~~~~~~l~-~i~~~~g~s~~~~--~~sl~si~~~~gr~~~G~lsd~~g~k~~~~r~~~l~~~~~~~~~~~ 277 (424)
++.++.......+...+| .+.+++|.+..+. +.+...++..++.+..|+++||+|||+.+ .++.++.+++.
T Consensus 3 l~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~l------~~~~~~~~~~~ 76 (352)
T PF07690_consen 3 LAFFLSGFGFSIISPALPLYLAEELGLSPSQIGLLFSAFFLGSALFSPFAGYLSDRFGRRRVL------IIGLLLFALGS 76 (352)
T ss_dssp HHHHHHHHHHHHHHHHHH-HHHCCSTTTSHCHHHHHHHHHHHHHHHHHHHHHHHHHS-HHHHH------HHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCeeeE------eehhhhhhhHH
Confidence 344444444444556677 6667789887654 88889999999999999999999988744 56666666664
Q ss_pred HHHHh-chhHHHHHHHHHHHHHhhhhHhHHHHHHHHhhCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhh
Q 014462 278 LYYAI-GWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIASGIYDYYAEKQAGL 356 (424)
Q Consensus 278 ll~~~-~~~~~l~~~~~l~G~~~G~~~~~~~~~~se~fg~~~~g~~~g~~~~~~~lgs~l~~~~l~g~l~d~~~~~~~~~ 356 (424)
++... .+.+.+++..++.|++.+..++....++.|.++.+++++..++......+|..+ +|.+++.+.+..+
T Consensus 77 ~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~-g~~l~~~l~~~~~------ 149 (352)
T PF07690_consen 77 LLLAFASNFWLLLIARFLLGIGSGFFSPASNALIADWFPPEERGRAFGILSAGFSLGSIL-GPLLGGFLISYFG------ 149 (352)
T ss_dssp HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCTCCHHHHHHHHHHHHHHHHHH-HHHHHHHCCCHCH------
T ss_pred HHhhhhhhHHHHhhhccccccccccccccccccccccchhhhhhhccccccchhhhhhhc-ccchhhhhhhccc------
Confidence 44333 555578889999999999999999999999999999999999999999999997 8999999887776
Q ss_pred hhhccCCCCCcccCCCCCCcccCCcchHHHHHHHHHHHHHHHHHHHH
Q 014462 357 LWKYNGNMLPVSFRDQETPTCLGSICYSITCGIMAGLCIIAMVMSLI 403 (424)
Q Consensus 357 ~~~~~~~~~~~~~~~~~~~~c~g~~c~~~~f~i~a~~~~~~~~l~~~ 403 (424)
|+++|++.+++++++.++...
T Consensus 150 --------------------------~~~~~~~~~~~~~~~~il~~~ 170 (352)
T PF07690_consen 150 --------------------------WRWAFLISAILSLIAAILFIL 170 (352)
T ss_dssp --------------------------HCCHHHHHHHHHHHHHHHHHC
T ss_pred --------------------------cccccccccchhhhhhhhHhh
Confidence 999999999999988775433
No 23
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=99.48 E-value=2.1e-12 Score=129.00 Aligned_cols=156 Identities=11% Similarity=0.138 Sum_probs=128.9
Q ss_pred HHHHhcHHHHHHHcCCCchhH--HHHHHHHHhhhhhhhhhhhhhhhhhcccCchhHHHHHHHHHHHHHHHHHH-hchhHH
Q 014462 211 LTVIDNLGQICQSLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVMAFALLYYA-IGWPGE 287 (424)
Q Consensus 211 ~~~~~~l~~i~~~~g~s~~~~--~~sl~si~~~~gr~~~G~lsd~~g~k~~~~r~~~l~~~~~~~~~~~ll~~-~~~~~~ 287 (424)
..+...+|.+.+++|.++.+. ..+...++..++.+..|+++||+|||+.+ ..+.++.+++.++.. ..+.+.
T Consensus 22 ~~~~~~~p~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~------~~~~~~~~~~~~~~~~~~~~~~ 95 (385)
T TIGR00710 22 DMYLPAFPEIAADLSTPASIVQMTLTLYLLGFAAGQLLWGPLSDRYGRRPVL------LLGLFIFALSSLGLALSNNIET 95 (385)
T ss_pred HHhcccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHH------HHHHHHHHHHHHHHHHHccHHH
Confidence 344557888889999987654 88889999999999999999999988654 455556666655544 445667
Q ss_pred HHHHHHHHHHHhhhhHhHHHHHHHHhhCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhccCCCCCc
Q 014462 288 IYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIASGIYDYYAEKQAGLLWKYNGNMLPV 367 (424)
Q Consensus 288 l~~~~~l~G~~~G~~~~~~~~~~se~fg~~~~g~~~g~~~~~~~lgs~l~~~~l~g~l~d~~~~~~~~~~~~~~~~~~~~ 367 (424)
+++..++.|++.+...+...+++.|.++.+++++.+++.+....+|+.+ ++.+.+.+.+..+
T Consensus 96 ~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-g~~~~~~l~~~~~----------------- 157 (385)
T TIGR00710 96 LLVLRFVQAFGASAGSVISQALVRDIYPGEELSRIYSILMPVLALAPAV-APLLGGYILVWLS----------------- 157 (385)
T ss_pred HHHHHHHHHcchhHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHcC-----------------
Confidence 7888999999999999999999999999999999999999999999987 8999998888766
Q ss_pred ccCCCCCCcccCCcchHHHHHHHHHHHHHHHHHHHHHh
Q 014462 368 SFRDQETPTCLGSICYSITCGIMAGLCIIAMVMSLIVV 405 (424)
Q Consensus 368 ~~~~~~~~~c~g~~c~~~~f~i~a~~~~~~~~l~~~l~ 405 (424)
|+.+|++.++++++..+...+..
T Consensus 158 ---------------~~~~~~~~~~~~~~~~~~~~~~~ 180 (385)
T TIGR00710 158 ---------------WHAIFAFLSLAGILLSALIFFIL 180 (385)
T ss_pred ---------------HHHHHHHHHHHHHHHHHHHHHhC
Confidence 99999999888887776665544
No 24
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=99.48 E-value=1.9e-12 Score=132.21 Aligned_cols=177 Identities=12% Similarity=0.060 Sum_probs=132.9
Q ss_pred HHHHHHHHHhhhhHHHHHhcHHHHHHHcCCCchhH--HHHHHHHHhhhhhhhhhhhhhhhhhcccCchhHHHHHHHHHHH
Q 014462 197 LLLFFSLVLASGSGLTVIDNLGQICQSLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVMA 274 (424)
Q Consensus 197 wll~~~~~~~~~~~~~~~~~l~~i~~~~g~s~~~~--~~sl~si~~~~gr~~~G~lsd~~g~k~~~~r~~~l~~~~~~~~ 274 (424)
+.+++.+++..........-.|.+.+++|.+..+. ..+.+.++..++.+..|+++||+|||+.+ .++.++.+
T Consensus 11 ~~~~~~~~~~~~d~~~~~~~~~~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~------~~~~~~~~ 84 (412)
T TIGR02332 11 IFLFILFIFSFLDRINIGFAGLTMGKDLGLSATMFGLAATLFYAAYVICGIPSNIMLAIIGARRWI------AGIMVLWG 84 (412)
T ss_pred HHHHHHHHHHHhhhhhHHHHHHhhHhhcCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhChHHHH------HHHHHHHH
Confidence 34444444434334444445666778899987765 88899999999999999999999998754 55566666
Q ss_pred HHHHHHH-hchhHHHHHHHHHHHHHhhhhHhHHHHHHHHhhCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhh
Q 014462 275 FALLYYA-IGWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIASGIYDYYAEKQ 353 (424)
Q Consensus 275 ~~~ll~~-~~~~~~l~~~~~l~G~~~G~~~~~~~~~~se~fg~~~~g~~~g~~~~~~~lgs~l~~~~l~g~l~d~~~~~~ 353 (424)
++.++.+ ..+.+.+++..++.|++.|..++....+++|++|+++||+..++.+.+.++|+.+ ++.+++.+.+..+.
T Consensus 85 ~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~-~~~~~~~l~~~~~~-- 161 (412)
T TIGR02332 85 IASTATMFATGPESLYLLRILVGIAEAGFLPGILLYLTFWFPAYFRARANALFMIAMPVTMAL-GLILSGYILALDGL-- 161 (412)
T ss_pred HHHHHHHHhcCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhCCCC--
Confidence 6665554 3556788899999999999999888899999999999999999999999999997 89999988753210
Q ss_pred hhhhhhccCCCCCcccCCCCCCcccCCcchHHHHHHHHHHHHHHHHHHHHHhh
Q 014462 354 AGLLWKYNGNMLPVSFRDQETPTCLGSICYSITCGIMAGLCIIAMVMSLIVVH 406 (424)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~~~~~~c~g~~c~~~~f~i~a~~~~~~~~l~~~l~~ 406 (424)
.+...||++|++.++.+++.+++..++.+
T Consensus 162 ------------------------~~~~gwr~~f~~~~~~~l~~~~~~~~~~~ 190 (412)
T TIGR02332 162 ------------------------MALKGWQWLFLLEGFPSVILGVMTWFWLD 190 (412)
T ss_pred ------------------------CCccchhHHHHHHHHHHHHHHHHHhhccC
Confidence 00012999999988887766555544443
No 25
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=99.48 E-value=6.8e-13 Score=131.92 Aligned_cols=186 Identities=16% Similarity=0.140 Sum_probs=148.1
Q ss_pred CCHHHhhhhHHHHHHHHHHHHhhhhHHHHHhcHHHHHHH-cCCCchhH--HHHHHHHHhhhhhhhhhhhhhhhhhcccCc
Q 014462 185 FTLPQALMKADFLLLFFSLVLASGSGLTVIDNLGQICQS-LGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYP 261 (424)
Q Consensus 185 ~t~~~~l~~~~fwll~~~~~~~~~~~~~~~~~l~~i~~~-~g~s~~~~--~~sl~si~~~~gr~~~G~lsd~~g~k~~~~ 261 (424)
..++.+.++++.|.+.+.++...|+..++.+++|+++++ +|.+..++ +..+..+.+.+.|+.+|+++||+|.+|..
T Consensus 209 ~~~~~v~~~~~~W~lsllY~~tFG~Fvgfs~~l~~~~~~~fg~~~~~Ag~~a~~f~~~g~l~Rp~GG~LsDR~Gg~rv~- 287 (417)
T COG2223 209 AQLKAVFSNKDTWLLSLLYFATFGGFVGFSAYLPMYLVTQFGLSPVTAGLIAFLFPLIGALARPLGGWLSDRIGGRRVT- 287 (417)
T ss_pred hHHHHHhcCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHHHHhccchhhhhccchhHH-
Confidence 457778899999999999999999999999999999977 89987664 88899999999999999999999987755
Q ss_pred hhHHHHHHHHHHHHHHHHHH-h-------chhHHHHHHHHHHHHHhhhhHhHHHHHHHHhhCcchhhHHHHHHHHHHHHH
Q 014462 262 RPVAMAVAQVVMAFALLYYA-I-------GWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAG 333 (424)
Q Consensus 262 r~~~l~~~~~~~~~~~ll~~-~-------~~~~~l~~~~~l~G~~~G~~~~~~~~~~se~fg~~~~g~~~g~~~~~~~lg 333 (424)
.+....++++..... . .+....+...+..+++.|.........++.+| +++.|...|+..+...+|
T Consensus 288 -----~~~f~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~l~~~~G~GnGsvfk~Ip~if-~~~~G~v~G~vga~G~lG 361 (417)
T COG2223 288 -----LAVFVGMALAAALLSLFLTGFGHGGSFVVFVAVFLALFVFAGLGNGSVFKMIPVIF-PKETGAVTGIVGAIGGLG 361 (417)
T ss_pred -----HHHHHHHHHHHHHHHccccccccCcchHHHHHHHHHHHHHhccCcchheeechHHH-HhhhhHHHHHHHHhcccc
Confidence 333334444333332 1 12233444455666777777777778888888 468899999999999999
Q ss_pred HHHHHHHHHHHHHhhhhhhhhhhhhhccCCCCCcccCCCCCCcccCCcchHHHHHHHHHHHHHHHHHHHHHhhhhh
Q 014462 334 SLIFSGVIASGIYDYYAEKQAGLLWKYNGNMLPVSFRDQETPTCLGSICYSITCGIMAGLCIIAMVMSLIVVHRTK 409 (424)
Q Consensus 334 s~l~~~~l~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~g~~c~~~~f~i~a~~~~~~~~l~~~l~~~~~ 409 (424)
++. =|...|..+|..+. |...|+++..+++++.++...++.|+|
T Consensus 362 Gf~-lp~~~g~~~~~tg~-------------------------------~~~~f~~~~~~~~~a~v~~~~~y~r~~ 405 (417)
T COG2223 362 GFF-LPLAFGVSLDLTGS-------------------------------YTGAFMLLLAFYLVALVLTWALYARRR 405 (417)
T ss_pred ccc-hhHHHHHHHHhccc-------------------------------HHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 987 49999999998872 899999999999999888887776654
No 26
>PRK10091 MFS transport protein AraJ; Provisional
Probab=99.48 E-value=1.9e-12 Score=130.57 Aligned_cols=171 Identities=11% Similarity=0.086 Sum_probs=140.1
Q ss_pred HHHHHHHHHHHHhhhhHHHHHhcHHHHHHHcCCCchhH--HHHHHHHHhhhhhhhhhhhhhhhhhcccCchhHHHHHHHH
Q 014462 194 ADFLLLFFSLVLASGSGLTVIDNLGQICQSLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQV 271 (424)
Q Consensus 194 ~~fwll~~~~~~~~~~~~~~~~~l~~i~~~~g~s~~~~--~~sl~si~~~~gr~~~G~lsd~~g~k~~~~r~~~l~~~~~ 271 (424)
+.+|.+.+..++...........+|.+.+++|.+..+. ..+...++..++++.+|+++||+|||+.+ .++.+
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~------~~~~~ 76 (382)
T PRK10091 3 KVILSLALGTFGLGMAEFGIMGVLTELAHDVGISIPAAGHMISYYALGVVVGAPIIALFSSRYSLKHIL------LFLVA 76 (382)
T ss_pred chHHHHHHHHHHHHhhHHHHHhChHHHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHHccCccHHHH------HHHHH
Confidence 45677777766666666667778899999999987654 88999999999999999999999998755 55566
Q ss_pred HHHHHHHHHH-hchhHHHHHHHHHHHHHhhhhHhHHHHHHHHhhCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh
Q 014462 272 VMAFALLYYA-IGWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIASGIYDYYA 350 (424)
Q Consensus 272 ~~~~~~ll~~-~~~~~~l~~~~~l~G~~~G~~~~~~~~~~se~fg~~~~g~~~g~~~~~~~lgs~l~~~~l~g~l~d~~~ 350 (424)
+.+++.++.. ..+.+.+++..++.|++.|...+....++.++++++++++..++...+..+|..+ ++.+++.+.+..+
T Consensus 77 ~~~~~~~l~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-g~~l~~~l~~~~g 155 (382)
T PRK10091 77 LCVIGNAMFTLSSSYLMLAIGRLVSGFPHGAFFGVGAIVLSKIIKPGKVTAAVAGMVSGMTVANLL-GIPLGTYLSQEFS 155 (382)
T ss_pred HHHHHHHHHHHhCcHHHHHHHHHHHHhhhHHHHHHHHHHHHHhCChHHhhHHHHHHHHHHHHHHHH-hccHHHHHhhhcc
Confidence 6666666555 4567788889999999999988888899999999999999999999999999997 8999998887665
Q ss_pred hhhhhhhhhccCCCCCcccCCCCCCcccCCcchHHHHHHHHHHHHHHHHHHHH
Q 014462 351 EKQAGLLWKYNGNMLPVSFRDQETPTCLGSICYSITCGIMAGLCIIAMVMSLI 403 (424)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~~~~~~~~~c~g~~c~~~~f~i~a~~~~~~~~l~~~ 403 (424)
||++|++.+.++++..+....
T Consensus 156 --------------------------------wr~~f~~~~~~~~~~~~~~~~ 176 (382)
T PRK10091 156 --------------------------------WRYTFLLIAVFNIAVLASIYF 176 (382)
T ss_pred --------------------------------HHHHHHHHHHHHHHHHHHHHH
Confidence 999999999887776654443
No 27
>PRK10054 putative transporter; Provisional
Probab=99.47 E-value=2.9e-12 Score=130.08 Aligned_cols=173 Identities=10% Similarity=0.044 Sum_probs=133.1
Q ss_pred hHHHHHHHHHHHHhhhhHHHHHhcHHHHHH-HcCCCchhH--HHHHHHHHhhhhhhhhhhhhhhhhhcccCchhHHHHHH
Q 014462 193 KADFLLLFFSLVLASGSGLTVIDNLGQICQ-SLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVA 269 (424)
Q Consensus 193 ~~~fwll~~~~~~~~~~~~~~~~~l~~i~~-~~g~s~~~~--~~sl~si~~~~gr~~~G~lsd~~g~k~~~~r~~~l~~~ 269 (424)
++++|.+.+..++.......+...++.+.+ ++|++..+. .++...+...++++..|+++||+|+|+.+ .++
T Consensus 6 ~~~~~~l~~~~~~~~~g~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~k~~~------~~~ 79 (395)
T PRK10054 6 RRSTSALLASSLLLTIGRGATLPFMTIYLSRQYSLSVDLIGYAMTIALTIGVVFSLGFGILADKFDKKRYM------LLA 79 (395)
T ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhH------HHH
Confidence 345788888888877777777777888775 589998765 77888899999999999999999998654 444
Q ss_pred HHHHHHHHHHHH-hchhHHHHHHHHHHHHHhhhhHhHHHHHHHHhhCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 014462 270 QVVMAFALLYYA-IGWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIASGIYDY 348 (424)
Q Consensus 270 ~~~~~~~~ll~~-~~~~~~l~~~~~l~G~~~G~~~~~~~~~~se~fg~~~~g~~~g~~~~~~~lgs~l~~~~l~g~l~d~ 348 (424)
.++..++.+++. ..+.+.+++...+.|.+.+...+...+..+|.++.+++++++++.+....+|..+ +|.+.+.+++
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~lg~~i-gp~l~~~l~~- 157 (395)
T PRK10054 80 ITAFASGFIAIPLVNNVTLVVLFFALINCAYSVFSTVLKAWFADNLSSTSKTKIFSLNYTMLNIGWTV-GPPLGTLLVM- 157 (395)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHH-HHHHHHHHHH-
Confidence 444455554444 3344455556667777777777788899999999999999999999999999997 9999998874
Q ss_pred hhhhhhhhhhhccCCCCCcccCCCCCCcccCCcchHHHHHHHHHHHHHHHHHHHHHh
Q 014462 349 YAEKQAGLLWKYNGNMLPVSFRDQETPTCLGSICYSITCGIMAGLCIIAMVMSLIVV 405 (424)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~g~~c~~~~f~i~a~~~~~~~~l~~~l~ 405 (424)
.+ |+.+|++.+++++++.++..+..
T Consensus 158 ~g--------------------------------~~~~f~~~~~~~~i~~i~~~~~~ 182 (395)
T PRK10054 158 QS--------------------------------INLPFWLAAICSAFPLVFIQIWV 182 (395)
T ss_pred hc--------------------------------cCcHHHHHHHHHHHHHHHHHHHH
Confidence 34 88999988888887766554433
No 28
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.46 E-value=4.2e-12 Score=128.34 Aligned_cols=160 Identities=13% Similarity=0.132 Sum_probs=123.7
Q ss_pred HHHHhcHHHHHHHcCCCchhHHHHHHHHHhhhhhhhhhhhhhhhhhcccCchhHHHHHHHHHHHHHHHHHH-hchhHHHH
Q 014462 211 LTVIDNLGQICQSLGYADTSIYVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVMAFALLYYA-IGWPGEIY 289 (424)
Q Consensus 211 ~~~~~~l~~i~~~~g~s~~~~~~sl~si~~~~gr~~~G~lsd~~g~k~~~~r~~~l~~~~~~~~~~~ll~~-~~~~~~l~ 289 (424)
.....+++.+.++.|.+......+.+.++..++++..|++.||+++|+.. ..+..+++++.+++. ..+.+.++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~ 306 (399)
T PRK05122 233 GTIATFITLYYAARGWDGAALALTLFGVAFVGARLLFGNLINRLGGLRVA------IVSLLVEILGLLLLWLAPSPWMAL 306 (399)
T ss_pred HHHHHHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHHHHHhccHHHH------HHHHHHHHHHHHHHHHhccHHHHH
Confidence 34455677777777775545567788889999999999999999877533 444445555544443 34445566
Q ss_pred HHHHHHHHHhhhhHhHHHHHHHHhhCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhccCCCCCccc
Q 014462 290 VTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIASGIYDYYAEKQAGLLWKYNGNMLPVSF 369 (424)
Q Consensus 290 ~~~~l~G~~~G~~~~~~~~~~se~fg~~~~g~~~g~~~~~~~lgs~l~~~~l~g~l~d~~~~~~~~~~~~~~~~~~~~~~ 369 (424)
+..++.|++.+..++.....+.+.+|++++|+.+++.+....+|..+ ++.+.|.+.|..+
T Consensus 307 ~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~-~~~~~g~l~~~~g------------------- 366 (399)
T PRK05122 307 IGAALTGFGFSLVFPALGVEAVKRVPPQNRGAALGAYSVFLDLSLGI-TGPLAGLVASWFG------------------- 366 (399)
T ss_pred HHHHHHHHhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHcC-------------------
Confidence 77888999999888888888889999999999999999999999987 7889999988766
Q ss_pred CCCCCCcccCCcchHHHHHHHHHHHHHHHHHHHHHhhhhh
Q 014462 370 RDQETPTCLGSICYSITCGIMAGLCIIAMVMSLIVVHRTK 409 (424)
Q Consensus 370 ~~~~~~~c~g~~c~~~~f~i~a~~~~~~~~l~~~l~~~~~ 409 (424)
|+.+|++.+++++++.++...+.++++
T Consensus 367 -------------~~~~~~~~~~~~~~~~~~~~~~~~~~~ 393 (399)
T PRK05122 367 -------------YPSIFLAAALAALLGLALTWLLYRRAP 393 (399)
T ss_pred -------------HHHHHHHHHHHHHHHHHHHHHhccccc
Confidence 999999999988888777766554433
No 29
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=99.45 E-value=2.5e-13 Score=128.86 Aligned_cols=95 Identities=32% Similarity=0.643 Sum_probs=88.2
Q ss_pred CCCCCCchHHHHHHHHHHHHHHHHHHhhcccCCC--CcccCCCCchhHHHHHHHHHHHHHHHHHHHhhcccccchHHHHH
Q 014462 1 MISANETSLIFLVAVGPSIVVMAFMFIVRPIGGH--RQVRLSDNTSFLFTYTVCLILAAYMLAVLLLEDLEVANQNVLTV 78 (424)
Q Consensus 1 ~~~~~~~~~~llla~~p~~v~~~~~~~~r~~~~~--~~~~~~~~~~f~~~~~~~~~l~~~l~~~~~~~~~~~~s~~~~~~ 78 (424)
+|++|+++|++|++++|.++++++++++|++|++ .++++.|.++|...+++++++++|+++.++++++.+++++.+..
T Consensus 154 ~f~~~~~~fll~la~~~~~v~l~~~~~vr~~~~~~~~~~~~~~~~~F~~~~~i~l~la~yLl~~~i~~~~~~~s~~~~~~ 233 (250)
T PF06813_consen 154 FFGDDPSSFLLFLAVLPAVVCLVAMFFVRPVPPSPSRTRQPSESKRFLFFFAIALALAIYLLVISILQNFVKLSRAARVI 233 (250)
T ss_pred HcCCChHHHHHHHHHHHHHHHHHHhhheeccCCccccccCcchhHHHHHHHHHHHHHHHHHHHHHHHhcccCCCHHHHHH
Confidence 5789999999999999999999999999998763 44567889999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhhhHhh
Q 014462 79 LAVGLIIIILLPVTIPV 95 (424)
Q Consensus 79 ~~~v~~~ll~~Pl~i~~ 95 (424)
.+++++++|++|++||+
T Consensus 234 ~~~il~llL~~Pl~i~~ 250 (250)
T PF06813_consen 234 FAVILLLLLLLPLAIPV 250 (250)
T ss_pred HHHHHHHHHHhhhhccC
Confidence 99999999999999885
No 30
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.45 E-value=4.1e-11 Score=120.95 Aligned_cols=156 Identities=10% Similarity=-0.019 Sum_probs=128.6
Q ss_pred HHHhhhhHHHHHHHHHHHHhhhhHHHHHhcHHHHHHHcCCCchhH--HHHHHHHHhhhhhhhhhhhhhhhhhcccCchhH
Q 014462 187 LPQALMKADFLLLFFSLVLASGSGLTVIDNLGQICQSLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPV 264 (424)
Q Consensus 187 ~~~~l~~~~fwll~~~~~~~~~~~~~~~~~l~~i~~~~g~s~~~~--~~sl~si~~~~gr~~~G~lsd~~g~k~~~~r~~ 264 (424)
.++.+|++++|.+.+..++..++...+..+.|++.+++|.+.... ..++..+...++.+.+|++.||+++|+.+
T Consensus 198 ~~~~l~~~~~~~~l~~~~l~~~~~~~~~~~~~~~l~~~g~s~~~~g~l~~~~~~~~i~~~~~~~~l~~r~g~~~~l---- 273 (382)
T TIGR00902 198 FIALLKNPMNLRFLAAVCLIQGAHAAYYGFSAIYWQAAGISASATGLLWGIGVLAEIIIFAFSNKLFQNCSARDLL---- 273 (382)
T ss_pred HHHHHcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHhHHHHHHHHHHHHHHHHHHHhHHHHhhCCHHHHH----
Confidence 456889999999988888877777778888999999999987654 66677888888889999999999877544
Q ss_pred HHHHHHHHHHHHHHHHH-hchhHHHHHHHHHHHHHhhhhHhHHHHHHHHhhCcchhhHHHHHHH-HHHHHHHHHHHHHHH
Q 014462 265 AMAVAQVVMAFALLYYA-IGWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLT-LASPAGSLIFSGVIA 342 (424)
Q Consensus 265 ~l~~~~~~~~~~~ll~~-~~~~~~l~~~~~l~G~~~G~~~~~~~~~~se~fg~~~~g~~~g~~~-~~~~lgs~l~~~~l~ 342 (424)
.++.+...+...++. ..+.+.+++..++.|+++|..++....++++. |.+++++.+++.+ +...+|..+ ++.++
T Consensus 274 --~~~~~~~~~~~~~~~~~~~~~~~~~~q~l~g~~~~~~~~~~~~~i~~~-~~~~~~~~q~~~~~~~~g~g~~~-g~~~~ 349 (382)
T TIGR00902 274 --LISAIACVGRWAIIGAIEAFPLIFLLQILHCGTFAVCHLAAMRYIAAQ-PGSEIAKLQALYNALAMGGLIAI-FTAFA 349 (382)
T ss_pred --HHHHHHHHHHHHHHHhHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CHhhHHHHHHHHHHHHHHHHHHH-HHHHH
Confidence 566666666666655 44556778889999999999999999999988 8889999999976 567899997 89999
Q ss_pred HHHHhhhh
Q 014462 343 SGIYDYYA 350 (424)
Q Consensus 343 g~l~d~~~ 350 (424)
|.++|+.+
T Consensus 350 G~l~~~~g 357 (382)
T TIGR00902 350 GFIYPTLG 357 (382)
T ss_pred HHHHHhcc
Confidence 99999886
No 31
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=99.45 E-value=7.1e-12 Score=127.91 Aligned_cols=177 Identities=14% Similarity=0.111 Sum_probs=123.4
Q ss_pred HHHHHHHHHHHHhhhhHHHHHhcHHHHHHHcCCCchhH--HHHHHHHHhhhhhhhhhhhhhhhhhcccCchhHHHHHHHH
Q 014462 194 ADFLLLFFSLVLASGSGLTVIDNLGQICQSLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQV 271 (424)
Q Consensus 194 ~~fwll~~~~~~~~~~~~~~~~~l~~i~~~~g~s~~~~--~~sl~si~~~~gr~~~G~lsd~~g~k~~~~r~~~l~~~~~ 271 (424)
+.+|...+..+........+..+.|.+.++.|++.... ......+++.++++++|+++||++||+.. .++.+
T Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~------~~~~~ 357 (481)
T TIGR00879 284 RLFLGVVLQWFQQFTGINAIMYYSPTIFENAGVSTDHAFLVSIIVGAVNFAFTFVAIFLVDRFGRRPLL------LIGAA 357 (481)
T ss_pred HHHHHHHHHHHHHHhCCeehHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHH------HHHHH
Confidence 34444444444443334445567788888899887443 77788889999999999999999987644 33444
Q ss_pred HHHHHHHHHH---h--ch------hHHHHHHHHHHHHHhhhhH-hHHHHHHHHhhCcchhhHHHHHHHHHHHHHHHHHHH
Q 014462 272 VMAFALLYYA---I--GW------PGEIYVTTVLVGLSYGAHW-AIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSG 339 (424)
Q Consensus 272 ~~~~~~ll~~---~--~~------~~~l~~~~~l~G~~~G~~~-~~~~~~~se~fg~~~~g~~~g~~~~~~~lgs~l~~~ 339 (424)
+++++.+++. . .. .........+.+.+.+..+ +....++.|.+|++++|+..++.++...+|+.+ +|
T Consensus 358 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~lg~~i-~~ 436 (481)
T TIGR00879 358 GMAICLFVLGILGASFVTGSSKSSGNVAIVFILLFIAFFAMGWGPVPWVIVSEIFPLSLRPKGISIAVAANWLANFI-VG 436 (481)
T ss_pred HHHHHHHHHHHHhhcccCCcccchhHHHHHHHHHHHHHHHccccCeehhhhhccCChHHHHHHHHHHHHHHHHHHHH-HH
Confidence 4444444332 1 11 2222333334444444333 555677799999999999999999999999998 89
Q ss_pred HHHHHHHhhhhhhhhhhhhhccCCCCCcccCCCCCCcccCCcchHHHHHHHHHHHHHHHHHHHHHhhhhh
Q 014462 340 VIASGIYDYYAEKQAGLLWKYNGNMLPVSFRDQETPTCLGSICYSITCGIMAGLCIIAMVMSLIVVHRTK 409 (424)
Q Consensus 340 ~l~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~g~~c~~~~f~i~a~~~~~~~~l~~~l~~~~~ 409 (424)
.+.|.+.|+.+ |+..|++.++++++++++.+.+.++++
T Consensus 437 ~~~~~~~~~~~--------------------------------~~~~f~~~~~~~~~~~i~~~~~~~~~~ 474 (481)
T TIGR00879 437 FLFPTMLESIG--------------------------------VGGVFIFFGGLNVLGLIFVYFFLPETK 474 (481)
T ss_pred HHHHHHHHhcC--------------------------------ccceehhHHHHHHHHHHHHheecccCC
Confidence 99999998766 888999999999988888776655544
No 32
>TIGR00898 2A0119 cation transport protein.
Probab=99.45 E-value=1.5e-11 Score=128.38 Aligned_cols=179 Identities=12% Similarity=0.085 Sum_probs=122.8
Q ss_pred CCCHHHhhhhHHHHHHHHHHHHhhhhHHHHHhcHHHHHHHcCCCchhHHHHHHHHHhhhhhhhhhhhhhhhhhcccCchh
Q 014462 184 DFTLPQALMKADFLLLFFSLVLASGSGLTVIDNLGQICQSLGYADTSIYVSMISIWNFLGRVGGGYFSEAIVRKFAYPRP 263 (424)
Q Consensus 184 ~~t~~~~l~~~~fwll~~~~~~~~~~~~~~~~~l~~i~~~~g~s~~~~~~sl~si~~~~gr~~~G~lsd~~g~k~~~~r~ 263 (424)
..+++++++++.+|...+..++...........++....+.+.+.. ....+.++....++++.+++.||+|||+..
T Consensus 313 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~i~~~~~~~~l~dr~grr~~~--- 388 (505)
T TIGR00898 313 QYSFLDLFRTPNLRKTTLCLMMLWFTTAFSYYGLVLDLGNLGGNIY-LDLFISGLVELPAKLITLLLIDRLGRRYTM--- 388 (505)
T ss_pred CCcHHHHhCChHHHHHHHHHHHHHHHHHHHHHHHhccccccCCChH-HHHHHHHHHHHHHHHHHHHHHHHhCCHHHH---
Confidence 3578889999998877665544433322222223333334444422 234456777888999999999999988644
Q ss_pred HHHHHHHHHHHHHHHHHHh-ch--hHHHHHHHHHHHHHhhhhHhHHHHHHHHhhCcchhhHHHHHHHHHHHHHHHHHHHH
Q 014462 264 VAMAVAQVVMAFALLYYAI-GW--PGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGV 340 (424)
Q Consensus 264 ~~l~~~~~~~~~~~ll~~~-~~--~~~l~~~~~l~G~~~G~~~~~~~~~~se~fg~~~~g~~~g~~~~~~~lgs~l~~~~ 340 (424)
.+..++.+++.+++.. .+ .....+..++.+++.+..++..+.+++|++|++.|+++.|+.++...+|+++ +|.
T Consensus 389 ---~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~ig~~i-~p~ 464 (505)
T TIGR00898 389 ---AASLLLAGVALLLLLFVPVDLYFLRTALAVLGKFGITSAFQMVYLYTAELYPTVVRNLGVGVCSTMARVGSII-SPF 464 (505)
T ss_pred ---HHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHhcccccHHHHhhhHhHHHHHHHHHHHH-HhH
Confidence 4445555555444432 22 2344555666677888888899999999999999999999999999999997 899
Q ss_pred HHHHHHhhhhhhhhhhhhhccCCCCCcccCCCCCCcccCCcchHHHHHHHHHHHHHHHHHHHHH
Q 014462 341 IASGIYDYYAEKQAGLLWKYNGNMLPVSFRDQETPTCLGSICYSITCGIMAGLCIIAMVMSLIV 404 (424)
Q Consensus 341 l~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~g~~c~~~~f~i~a~~~~~~~~l~~~l 404 (424)
+.+ + +..+ +..++.+.+++++++.++.+++
T Consensus 465 i~~-~-~~~~--------------------------------~~~~~~~~~~~~~~~~~~~~~l 494 (505)
T TIGR00898 465 LVY-L-GEKW--------------------------------LFLPLVLFGGLALLAGILTLFL 494 (505)
T ss_pred HHH-H-HHHH--------------------------------HhhHHHHHHHHHHHHHHHHHcC
Confidence 888 3 3333 5677888888887777666554
No 33
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=99.45 E-value=6.6e-12 Score=128.29 Aligned_cols=157 Identities=13% Similarity=0.094 Sum_probs=126.2
Q ss_pred HHHHHhcHHHHHHHcCCCchhH--HHHHHHHHhhhhhhhhhhhhhhhhhcccCchhHHHHHHHHHHHHHHHHHH-hchhH
Q 014462 210 GLTVIDNLGQICQSLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVMAFALLYYA-IGWPG 286 (424)
Q Consensus 210 ~~~~~~~l~~i~~~~g~s~~~~--~~sl~si~~~~gr~~~G~lsd~~g~k~~~~r~~~l~~~~~~~~~~~ll~~-~~~~~ 286 (424)
...+...+|++.+++|.+.... .++++.++..++++.+|+++||+|||+.+ ..+.++.+++.++.. ..+.+
T Consensus 32 ~~~~~p~l~~i~~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l------~~~~~~~~~~~~~~~~a~~~~ 105 (413)
T PRK15403 32 TDLIQPGIINVVRDFNADVSLAPASVSLYLAGGMALQWLLGPLSDRIGRRPVL------ITGALIFTLACAATLFTTSMT 105 (413)
T ss_pred HHhhccCHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhHHHHHcCchHHH------HHHHHHHHHHHHHHHHcCCHH
Confidence 3445557888889999887644 88899999999999999999999998754 445555555555544 45567
Q ss_pred HHHHHHHHHHHHhhhhHhHHHHHHHHhhCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhccCCCCC
Q 014462 287 EIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIASGIYDYYAEKQAGLLWKYNGNMLP 366 (424)
Q Consensus 287 ~l~~~~~l~G~~~G~~~~~~~~~~se~fg~~~~g~~~g~~~~~~~lgs~l~~~~l~g~l~d~~~~~~~~~~~~~~~~~~~ 366 (424)
.+++..++.|++.+...+...+++.|.++.+++++..++.+....+|..+ +|.+.+.+.+..+
T Consensus 106 ~l~~~r~l~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~lg~~l~~~~g---------------- 168 (413)
T PRK15403 106 QFLIARFIQGTSICFIATVGYVTVQEAFGQTKGIKLMAIITSIVLVAPII-GPLSGAALMHFVH---------------- 168 (413)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHhcC----------------
Confidence 78889999999988777777888999999999999999999999999987 8998888877655
Q ss_pred cccCCCCCCcccCCcchHHHHHHHHHHHHHHHHHHHHHh
Q 014462 367 VSFRDQETPTCLGSICYSITCGIMAGLCIIAMVMSLIVV 405 (424)
Q Consensus 367 ~~~~~~~~~~c~g~~c~~~~f~i~a~~~~~~~~l~~~l~ 405 (424)
|++.|++.+++.+++.+..+...
T Consensus 169 ----------------w~~~f~~~~~~~~i~~~~~~~~l 191 (413)
T PRK15403 169 ----------------WKVLFAIIAVMGLIAFVGLLLAM 191 (413)
T ss_pred ----------------HHHHHHHHHHHHHHHHHHHHHhC
Confidence 99999999998888766554433
No 34
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.45 E-value=3.1e-12 Score=130.96 Aligned_cols=190 Identities=12% Similarity=0.104 Sum_probs=141.3
Q ss_pred HHHhhhhHHHHHHHHHHHHhhhhHHHHHhcHHHHHHHcCCCc--------h--hHHHHHHHHHhhhhhhhhhhhhhhhhh
Q 014462 187 LPQALMKADFLLLFFSLVLASGSGLTVIDNLGQICQSLGYAD--------T--SIYVSMISIWNFLGRVGGGYFSEAIVR 256 (424)
Q Consensus 187 ~~~~l~~~~fwll~~~~~~~~~~~~~~~~~l~~i~~~~g~s~--------~--~~~~sl~si~~~~gr~~~G~lsd~~g~ 256 (424)
.++.+|++++|.+++..++............+.+.++.|.+. . ....++..+...++++..|+++||+++
T Consensus 201 ~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~g~~~~~~~i~~i~~~~~~g~l~dr~g~ 280 (418)
T TIGR00889 201 AFILFKNKRMAIFFFFSMLLGAPLQITNIFGNGFLHEFGRNPEFADSFVVKNASIWMSLSQFSEIFFILTIPFFLKRFGI 280 (418)
T ss_pred HHHHhcCCCeeeHHHHHHHHHhHHHHHHHhHHHHHHHhcccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhCc
Confidence 345788888888777776655444344455667777777543 1 337788888999999999999999998
Q ss_pred cccCchhHHHHHHHHHHHHHHHHHHh-c-h---hHHHHHHHHHHHHHhhhhHhHHHHHHHHhhCcchhhHHHHHHH-HHH
Q 014462 257 KFAYPRPVAMAVAQVVMAFALLYYAI-G-W---PGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLT-LAS 330 (424)
Q Consensus 257 k~~~~r~~~l~~~~~~~~~~~ll~~~-~-~---~~~l~~~~~l~G~~~G~~~~~~~~~~se~fg~~~~g~~~g~~~-~~~ 330 (424)
|+.+ .++.++.+++..++.. . + ...+++..++.|++.+...+....+++|.+|++++|+.+|+.+ ...
T Consensus 281 r~~l------~~~~~~~~v~~~l~~~~~~~~~~~~~l~l~~~l~g~~~~~~~~~~~~~i~~~~p~~~~g~~~g~~~~~~~ 354 (418)
T TIGR00889 281 KKVM------LLSLVAWALRFGFFAYGDPEYFGYALLFLSMIVYGCAFDFFNISGSVFVEKEVPVHIRASAQGLFTLMCN 354 (418)
T ss_pred HHHH------HHHHHHHHHHHHHHHHcCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
Confidence 8654 5555555555444332 1 1 2345667888999999888888899999999999999999997 578
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhhhhhhhhccCCCCCcccCCCCCCcccCCcchHHHHHHHHHHHHHHHHHHHHHhhhhh
Q 014462 331 PAGSLIFSGVIASGIYDYYAEKQAGLLWKYNGNMLPVSFRDQETPTCLGSICYSITCGIMAGLCIIAMVMSLIVVHRTK 409 (424)
Q Consensus 331 ~lgs~l~~~~l~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~g~~c~~~~f~i~a~~~~~~~~l~~~l~~~~~ 409 (424)
.+|+.+ ||.+.|.++|+.+.... ..|+.+|.+.+++++++.++..++.++++
T Consensus 355 ~lg~~i-Gp~l~G~l~~~~g~~~~--------------------------~~~~~~f~~~~~~~~i~~~l~~~~~~~~~ 406 (418)
T TIGR00889 355 GFGSLL-GYILSGVMVEKMFAYGT--------------------------FDWQTMWLFFAGYIAILAVLFMIFFKYSH 406 (418)
T ss_pred hhHHHH-HHHHHHHHHHHhccccC--------------------------CchHHHHHHHHHHHHHHHHHHHHHhCCcc
Confidence 899987 99999999998762110 02999999999998888888877776553
No 35
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.45 E-value=1.3e-12 Score=129.67 Aligned_cols=157 Identities=18% Similarity=0.169 Sum_probs=129.3
Q ss_pred HHHHHhcHHHHHHHcCCCchhH--HHHHHHHHhhhhhhhhhhhhhhhhhcccCchhHHHHHHHHHHHHHHHHHH-hchhH
Q 014462 210 GLTVIDNLGQICQSLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVMAFALLYYA-IGWPG 286 (424)
Q Consensus 210 ~~~~~~~l~~i~~~~g~s~~~~--~~sl~si~~~~gr~~~G~lsd~~g~k~~~~r~~~l~~~~~~~~~~~ll~~-~~~~~ 286 (424)
...+....|++.+++|.+..+. +.+...++..++.+..|+++||+|||+.+ ..+.++.+++..++. ..+.+
T Consensus 10 ~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~------~~~~~~~~~~~~~~~~~~~~~ 83 (399)
T TIGR00893 10 RANLSFAAPMLQEDLGLSAAQYGYVFSAFSWGYVVGQFPGGWLLDRFGARKTL------AVFIVIWGVFTGLQAFAGAYV 83 (399)
T ss_pred HHhhhHhHHHHHHhhCCChhhHHHHHHHHHHHHHHHHHhHHHHHHhcCcceee------HHHHHHHHHHHHHHHHHcCHH
Confidence 3445556777888899987654 88899999999999999999999998866 455555555555544 34667
Q ss_pred HHHHHHHHHHHHhhhhHhHHHHHHHHhhCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhccCCCCC
Q 014462 287 EIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIASGIYDYYAEKQAGLLWKYNGNMLP 366 (424)
Q Consensus 287 ~l~~~~~l~G~~~G~~~~~~~~~~se~fg~~~~g~~~g~~~~~~~lgs~l~~~~l~g~l~d~~~~~~~~~~~~~~~~~~~ 366 (424)
.+++..++.|++.|..++....+++|++|.++|++..++......+|..+ ++.+.+.+.+..+
T Consensus 84 ~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~-~~~~~~~l~~~~~---------------- 146 (399)
T TIGR00893 84 SLYILRVLLGAAEAPFFPGIILIVASWFPASERATAVSIFNSAQGLGGII-GGPLVGWILIHFS---------------- 146 (399)
T ss_pred HHHHHHHHHHHHHHhhhhHHHHHHHHhCCHHHHHHHHHHHHHhchHHHHH-HHHHHHHHHHhCC----------------
Confidence 78889999999999999999999999999999999999999999999997 8999998887766
Q ss_pred cccCCCCCCcccCCcchHHHHHHHHHHHHHHHHHHHHHh
Q 014462 367 VSFRDQETPTCLGSICYSITCGIMAGLCIIAMVMSLIVV 405 (424)
Q Consensus 367 ~~~~~~~~~~c~g~~c~~~~f~i~a~~~~~~~~l~~~l~ 405 (424)
|++.|++.++++++..++...+.
T Consensus 147 ----------------~~~~~~~~~~~~~~~~~~~~~~~ 169 (399)
T TIGR00893 147 ----------------WQWAFIIEGVLGIIWGVLWLKFI 169 (399)
T ss_pred ----------------chHHHHHHHHHHHHHHHHhhhee
Confidence 99999999888877666655443
No 36
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=99.44 E-value=2.1e-12 Score=133.61 Aligned_cols=169 Identities=12% Similarity=0.148 Sum_probs=136.1
Q ss_pred HHHHHHHhhhhHHHHHhcHHHHHHHcCCCchh--HHHHHHHHHhhhhhhhhhhhhhhhhhcccCchhHHHHHHHHHHHHH
Q 014462 199 LFFSLVLASGSGLTVIDNLGQICQSLGYADTS--IYVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVMAFA 276 (424)
Q Consensus 199 l~~~~~~~~~~~~~~~~~l~~i~~~~g~s~~~--~~~sl~si~~~~gr~~~G~lsd~~g~k~~~~r~~~l~~~~~~~~~~ 276 (424)
+..+.++.......+...+|.+.+++|.+..+ ...+.+.++..++.+..|+++||+|||+.+ .++.++.+++
T Consensus 7 ~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~------~~~~~~~~~~ 80 (485)
T TIGR00711 7 LMLGTFMAVLDSTIVNVAIPTIAGDLGSSLSQVQWVITSYMLANAISIPLTGWLAKRFGTRRLF------LISTFAFTLG 80 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCChhhhhHHHHHHHHHHHHHHHhHHHHHHHhCcHHHH------HHHHHHHHHH
Confidence 33444444444444556789999999988654 388899999999999999999999998754 5566666666
Q ss_pred HHHHH-hchhHHHHHHHHHHHHHhhhhHhHHHHHHHHhhCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhh
Q 014462 277 LLYYA-IGWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIASGIYDYYAEKQAG 355 (424)
Q Consensus 277 ~ll~~-~~~~~~l~~~~~l~G~~~G~~~~~~~~~~se~fg~~~~g~~~g~~~~~~~lgs~l~~~~l~g~l~d~~~~~~~~ 355 (424)
.++.. ..+...+++..++.|++.|...+...+++.|.+|+++|+++.++......+|..+ +|.++|.+.++.+
T Consensus 81 ~~~~~~~~~~~~l~~~~~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~-g~~~~~~l~~~~~----- 154 (485)
T TIGR00711 81 SLLCGVAPNLELMIIFRVIQGFGGGPLIPLSFSTLLNIYPPEKRGRAMAIWGLTVLVAPAL-GPTLGGWIIENYH----- 154 (485)
T ss_pred HHHHhCcCCHHHHHHHHHHHHhhhhhHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHhhh-hhccHhHhccCcC-----
Confidence 66555 3556778889999999999999999999999999999999999999999999997 9999999888665
Q ss_pred hhhhccCCCCCcccCCCCCCcccCCcchHHHHHHHHHHHHHHHHHHHHHhh
Q 014462 356 LLWKYNGNMLPVSFRDQETPTCLGSICYSITCGIMAGLCIIAMVMSLIVVH 406 (424)
Q Consensus 356 ~~~~~~~~~~~~~~~~~~~~~c~g~~c~~~~f~i~a~~~~~~~~l~~~l~~ 406 (424)
|++.|++.+.+++++.++..+..+
T Consensus 155 ---------------------------w~~~f~~~~~~~~~~~~~~~~~~~ 178 (485)
T TIGR00711 155 ---------------------------WRWIFLINVPIGIIVVVVAFFILP 178 (485)
T ss_pred ---------------------------ceehhhhhhHHHHHHHHHHHHHcC
Confidence 999999988888777766655543
No 37
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=99.44 E-value=5.9e-12 Score=131.66 Aligned_cols=171 Identities=11% Similarity=0.070 Sum_probs=136.5
Q ss_pred HHHHHHHHHhhhhHHHHHhcHHHHHHHcCCCchh--HHHHHHHHHhhhhhhhhhhhhhhhhhcccCchhHHHHHHHHHHH
Q 014462 197 LLLFFSLVLASGSGLTVIDNLGQICQSLGYADTS--IYVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVMA 274 (424)
Q Consensus 197 wll~~~~~~~~~~~~~~~~~l~~i~~~~g~s~~~--~~~sl~si~~~~gr~~~G~lsd~~g~k~~~~r~~~l~~~~~~~~ 274 (424)
..+.++.++.......+...+|++.+++|.+..+ +..+.+.++..++.+..|+++||+|||+.+ ..+.++..
T Consensus 9 ~~~~~~~~~~~ld~tiv~~a~p~i~~~l~~s~~~~~~~~~~~~l~~~~~~~~~G~l~D~~Grk~~l------~~~~~~~~ 82 (495)
T PRK14995 9 VIIVLVYIPVAIDATVLHVAAPTLSMTLGASGNELLWIIDIYSLVMAGMVLPMGALGDRIGFKRLL------MLGGTLFG 82 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHH------HHHHHHHH
Confidence 3444455555555555566789999999987643 488889999999999999999999998765 56666666
Q ss_pred HHHHHHH-hchhHHHHHHHHHHHHHhhhhHhHHHHHHHHhh-CcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhh
Q 014462 275 FALLYYA-IGWPGEIYVTTVLVGLSYGAHWAIVPAAASELF-GLKSFGALYNFLTLASPAGSLIFSGVIASGIYDYYAEK 352 (424)
Q Consensus 275 ~~~ll~~-~~~~~~l~~~~~l~G~~~G~~~~~~~~~~se~f-g~~~~g~~~g~~~~~~~lgs~l~~~~l~g~l~d~~~~~ 352 (424)
++.++.. ..+.+.++++.++.|++.|...+.....+.+.+ ++++|+++.|+......+|..+ ||.++|.+.+..+
T Consensus 83 ~~~~~~~~a~~~~~li~~r~l~G~g~~~~~~~~~~~l~~~~~~~~~r~~~~g~~~~~~~~g~~~-gp~lgg~l~~~~g-- 159 (495)
T PRK14995 83 LASLAAAFSPTASWLIATRALLAIGAAMIVPATLAGIRATFTEEKQRNMALGVWAAVGSGGAAF-GPLVGGILLEHFY-- 159 (495)
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHH-HHHHHHHhhccCC--
Confidence 6666655 456778888999999999998887777787776 6789999999999999999997 9999999998766
Q ss_pred hhhhhhhccCCCCCcccCCCCCCcccCCcchHHHHHHHHHHHHHHHHHHHHHhh
Q 014462 353 QAGLLWKYNGNMLPVSFRDQETPTCLGSICYSITCGIMAGLCIIAMVMSLIVVH 406 (424)
Q Consensus 353 ~~~~~~~~~~~~~~~~~~~~~~~~c~g~~c~~~~f~i~a~~~~~~~~l~~~l~~ 406 (424)
||+.|++...++++..++.....+
T Consensus 160 ------------------------------wr~~f~i~~~~~~~~~~l~~~~l~ 183 (495)
T PRK14995 160 ------------------------------WGSVFLINVPIVLVVMGLTARYVP 183 (495)
T ss_pred ------------------------------hHHHHHHHHHHHHHHHHHHHHhCC
Confidence 999999998888887766655543
No 38
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=99.44 E-value=3.7e-12 Score=133.35 Aligned_cols=173 Identities=13% Similarity=0.072 Sum_probs=108.2
Q ss_pred hhHHHHHhcHHHHHHHcCCCchh------------H--HHHHHHHHhhhhhhhhhhhhhhhhhcccCchhHHHHHHHHHH
Q 014462 208 GSGLTVIDNLGQICQSLGYADTS------------I--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVM 273 (424)
Q Consensus 208 ~~~~~~~~~l~~i~~~~g~s~~~------------~--~~sl~si~~~~gr~~~G~lsd~~g~k~~~~r~~~l~~~~~~~ 273 (424)
...+++..++|.+.++.|++... . ...+..++..+|.+++++++||+|||+.. .++.+++
T Consensus 302 ~~~y~~~~~~p~i~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~l~dr~gRR~~l------~~~~~~~ 375 (502)
T TIGR00887 302 IAFYGVNLNQKVILSAIGYSPPAATNNAYEELYKTAVGNLIIALAGTVPGYWVTVFLVDIIGRKPIQ------LMGFFIL 375 (502)
T ss_pred HHHHccccccHHHHHHHcCCCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcchhHH------HHHHHHH
Confidence 34455666789999888886421 1 23444556777999999999999998644 3334444
Q ss_pred HHHHHHHHh--c--h-hHHHHHHHHHHHHHhhhhHhHHHHHHHHhhCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 014462 274 AFALLYYAI--G--W-PGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIASGIYDY 348 (424)
Q Consensus 274 ~~~~ll~~~--~--~-~~~l~~~~~l~G~~~G~~~~~~~~~~se~fg~~~~g~~~g~~~~~~~lgs~l~~~~l~g~l~d~ 348 (424)
+++..++.. . + ...+....+...++..+..+..+.+.+|+||++.||++.++.+....+|+++ ++.+.+.+.|.
T Consensus 376 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~p~~~R~~~~g~~~~~~~~~~~~-~~~~~~~l~~~ 454 (502)
T TIGR00887 376 TVLFFVLGFAYNHLSTHGFLAIYVLAQFFANFGPNATTFIVPGEVFPTRYRSTAHGISAASGKAGAII-GQFGFLYLAQH 454 (502)
T ss_pred HHHHHHHHHHHHhcchhHHHHHHHHHHHHHhcCCCchhhhhhhccCchhHHHHHHHHHHHHhhhHHHH-HHHHhhhhhcc
Confidence 433333221 1 1 1111111111122222344567778899999999999999999999999997 89999999886
Q ss_pred hhhhhhhhhhhccCCCCCcccCCCCCCcccCCcchHHHHHHHHHHHHHHHHHHHHHhhhhhH
Q 014462 349 YAEKQAGLLWKYNGNMLPVSFRDQETPTCLGSICYSITCGIMAGLCIIAMVMSLIVVHRTKS 410 (424)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~g~~c~~~~f~i~a~~~~~~~~l~~~l~~~~~~ 410 (424)
.+..++ + ++...+..+|++.+++++++.+..+ +..+||+
T Consensus 455 ~~~~~~-----~-----------------~~~~~~~~~~~i~~~~~~~~~i~~~-~lpEt~~ 493 (502)
T TIGR00887 455 GDPTKG-----Y-----------------PTGIWMGHVLEIFALFMFLGILFTL-LIPETKG 493 (502)
T ss_pred cccccc-----c-----------------cccccchHHHHHHHHHHHHHHHHhe-EeccCCC
Confidence 531100 0 0000156788888888888766553 3345544
No 39
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=99.43 E-value=4.8e-12 Score=137.41 Aligned_cols=185 Identities=18% Similarity=0.146 Sum_probs=132.3
Q ss_pred hhHHHHHHHHHHHHhhhh-HH---HHHhcHHHHHHHcCCCchhH--HHHHHHHHhhhhhhhhhhhhhhhhhcccCchhHH
Q 014462 192 MKADFLLLFFSLVLASGS-GL---TVIDNLGQICQSLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVA 265 (424)
Q Consensus 192 ~~~~fwll~~~~~~~~~~-~~---~~~~~l~~i~~~~g~s~~~~--~~sl~si~~~~gr~~~G~lsd~~g~k~~~~r~~~ 265 (424)
..+..|.+++..+++... ++ .+...+|.+.+++|.+.... +.+...++.++|.+++|+++||+|||+.+
T Consensus 161 ~~~~~~~l~~i~~l~~~~~g~d~~~is~ilp~i~~~~gls~~~~g~l~s~~~lG~iiG~li~G~LsDR~GRR~~l----- 235 (742)
T TIGR01299 161 HGRFQWALFFVLGLALMADGVEVFVVGFVLPSAEKDLCIPDSGKGMLGLIVYLGMMVGAFFWGGLADKLGRKQCL----- 235 (742)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHH-----
Confidence 355566555444333322 11 23345777778899887543 78889999999999999999999998755
Q ss_pred HHHHHHHHHHHHHHHH-hchhHHHHHHHHHHHHHhhhhHhHHHHHHHHhhCcchhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 014462 266 MAVAQVVMAFALLYYA-IGWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIASG 344 (424)
Q Consensus 266 l~~~~~~~~~~~ll~~-~~~~~~l~~~~~l~G~~~G~~~~~~~~~~se~fg~~~~g~~~g~~~~~~~lgs~l~~~~l~g~ 344 (424)
.+++++.+++.++.+ ..+.+.+++..++.|++.|+..++.+++++|++|.++||..++++.++..+|.++ ++.++..
T Consensus 236 -ii~lil~~i~~ll~afa~s~~~llv~R~l~G~g~g~~~p~~~~~isE~~p~~~Rg~~~g~~~~~~~iG~il-a~~la~~ 313 (742)
T TIGR01299 236 -LICLSVNGFFAFFSSFVQGYGFFLFCRLLSGFGIGGAIPIVFSYFAEFLAQEKRGEHLSWLCMFWMIGGIY-AAAMAWA 313 (742)
T ss_pred -HHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH-HHHHHHH
Confidence 444444444444444 3456778889999999999999999999999999999999999999999999987 7887777
Q ss_pred HHhhhhhhhhhhhhhccCCCCCcccCCCCCCcccCCcchHHHHHHHHHHHHHHHHHHH
Q 014462 345 IYDYYAEKQAGLLWKYNGNMLPVSFRDQETPTCLGSICYSITCGIMAGLCIIAMVMSL 402 (424)
Q Consensus 345 l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~g~~c~~~~f~i~a~~~~~~~~l~~ 402 (424)
+....+.+.. . ...+....||+.|++.+..++++.++.+
T Consensus 314 il~~~G~~~~----------------~---g~~~~~~gWR~l~~i~~lp~ll~ll~~~ 352 (742)
T TIGR01299 314 IIPHYGWSFQ----------------M---GSAYQFHSWRVFVIVCAFPCVFAIGALT 352 (742)
T ss_pred HHHhccchhc----------------c---ccccccccHHHHHHHHHHHHHHHHHHHH
Confidence 6655442110 0 0112334599999888777666654443
No 40
>PRK12382 putative transporter; Provisional
Probab=99.43 E-value=1.5e-11 Score=124.08 Aligned_cols=154 Identities=12% Similarity=0.049 Sum_probs=122.4
Q ss_pred HHHhcHHHHHHHcCCCchhHHHHHHHHHhhhhhhhhhhhhhhhhhcccCchhHHHHHHHHHHHHHHHHHH-hchhHHHHH
Q 014462 212 TVIDNLGQICQSLGYADTSIYVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVMAFALLYYA-IGWPGEIYV 290 (424)
Q Consensus 212 ~~~~~l~~i~~~~g~s~~~~~~sl~si~~~~gr~~~G~lsd~~g~k~~~~r~~~l~~~~~~~~~~~ll~~-~~~~~~l~~ 290 (424)
.+..+.+.+.++.|++......+..+++..++++..|++.||+++|+.. ..+..+++++.+++. ..+...+++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (392)
T PRK12382 234 VIGTFVSLYFASKGWAMAGFTLTAFGGAFVLMRVLFGWMPDRFGGVKVA------IVSLLVETVGLLLLWLAPTAWVALA 307 (392)
T ss_pred HHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHhcCCCeeh------HHHHHHHHHHHHHHHHcccHHHHHH
Confidence 3445667777877876655566677888899999999999999988765 444455555554443 334455667
Q ss_pred HHHHHHHHhhhhHhHHHHHHHHhhCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhccCCCCCcccC
Q 014462 291 TTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIASGIYDYYAEKQAGLLWKYNGNMLPVSFR 370 (424)
Q Consensus 291 ~~~l~G~~~G~~~~~~~~~~se~fg~~~~g~~~g~~~~~~~lgs~l~~~~l~g~l~d~~~~~~~~~~~~~~~~~~~~~~~ 370 (424)
..++.|++++...+...+.+.+.++++++|+.+++.++...+|+.+ +|.+.|.+.|..+
T Consensus 308 ~~~l~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i-g~~~~g~l~~~~g-------------------- 366 (392)
T PRK12382 308 GAALTGAGCSLIFPALGVEVVKRVPSQVRGTALGGYAAFQDIAYGV-SGPLAGMLATSFG-------------------- 366 (392)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHhC--------------------
Confidence 7888899999888888889999999999999999999999999997 9999999999877
Q ss_pred CCCCCcccCCcchHHHHHHHHHHHHHHHHHHHHH
Q 014462 371 DQETPTCLGSICYSITCGIMAGLCIIAMVMSLIV 404 (424)
Q Consensus 371 ~~~~~~c~g~~c~~~~f~i~a~~~~~~~~l~~~l 404 (424)
|+..|.+.+++.+++.++.+..
T Consensus 367 ------------~~~~~~~~~~~~~~~~~~~~~~ 388 (392)
T PRK12382 367 ------------YPSVFLAGAISAVLGIIVTILS 388 (392)
T ss_pred ------------chHHHHHHHHHHHHHHHHHHhh
Confidence 9999999999888887766543
No 41
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=99.43 E-value=2.6e-11 Score=125.40 Aligned_cols=193 Identities=13% Similarity=0.086 Sum_probs=136.5
Q ss_pred CCHHHhhhhHHHHHHHHHHHHhhhhHHHHHhcHHHHHHH-cCCCchhH--HHHHHHHHhhhhhhhhhhhhhhhhhcccCc
Q 014462 185 FTLPQALMKADFLLLFFSLVLASGSGLTVIDNLGQICQS-LGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYP 261 (424)
Q Consensus 185 ~t~~~~l~~~~fwll~~~~~~~~~~~~~~~~~l~~i~~~-~g~s~~~~--~~sl~si~~~~gr~~~G~lsd~~g~k~~~~ 261 (424)
..+++.++++.+|.+.+..++.......+..++|.++++ +|++..+. +.++..+++.+++++.|+++||+++|+...
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~d~~~~~~~~~ 331 (465)
T TIGR00894 252 LPIKAIPKSLPVWAIWFAIFGHFWLYTILPTYLPTFISWVLRVSGKENGLLSSLPYLFAWLCSIFAGYLADFLKSSKTLS 331 (465)
T ss_pred CCHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcChHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCc
Confidence 357889999999999999988888888888899999865 78887554 677889999999999999999998776554
Q ss_pred hhHH----HHHHHHHHHHHHHHHHh--chhHHHHHHHHHHHHHhhhhHhHHHHHHHHhhCcchhhHHHHHHHHHHHHHHH
Q 014462 262 RPVA----MAVAQVVMAFALLYYAI--GWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSL 335 (424)
Q Consensus 262 r~~~----l~~~~~~~~~~~ll~~~--~~~~~l~~~~~l~G~~~G~~~~~~~~~~se~fg~~~~g~~~g~~~~~~~lgs~ 335 (424)
|+.. ..++..+.++..+.... .......+...+.+.+.+...+.......+..| +..|...++.++...+|+.
T Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~l~~~ 410 (465)
T TIGR00894 332 LTAARKIFNGIGGLGPGIFAYALPYLSAAFYLTIIILTLANAVSSGPLAGVLINSLDLAP-RFLGFIKGITGLPGFIGGL 410 (465)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHhhhhhhhhhhchhhcCh-hHHHHHHHHHHHHHHHHHH
Confidence 4322 12221111111111111 122333344455555555555555555566665 5899999999999999999
Q ss_pred HHHHHHHHHHHhhhhhhhhhhhhhccCCCCCcccCCCCCCcccCCcchHHHHHHHHHHHHHHHHHHHHHhhhh
Q 014462 336 IFSGVIASGIYDYYAEKQAGLLWKYNGNMLPVSFRDQETPTCLGSICYSITCGIMAGLCIIAMVMSLIVVHRT 408 (424)
Q Consensus 336 l~~~~l~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~g~~c~~~~f~i~a~~~~~~~~l~~~l~~~~ 408 (424)
+ +|.+.|.+.|..... .|..+|.+.+++++++.++...+....
T Consensus 411 i-~p~l~g~~~~~~~~~-----------------------------~~~~~f~~~~~~~~i~~i~~~~~~~~~ 453 (465)
T TIGR00894 411 I-ASTLAGNILSQDSKN-----------------------------VWLIVFLIMAFVNILCVIFYLIFGSAE 453 (465)
T ss_pred H-HHHhhheeeCCCCch-----------------------------HHHHHHHHHHHHHHHHHHHeeeeecce
Confidence 8 899999887754210 299999999999999887776554333
No 42
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=99.43 E-value=8.7e-12 Score=125.85 Aligned_cols=169 Identities=14% Similarity=0.127 Sum_probs=132.7
Q ss_pred HHHHHHhhhhHHHHHhcHHHHHHHcCCCchhH--HHHHHHHHhhhhhhhhhhhhhhhhhcccCchhHHHHHHHHHHHHHH
Q 014462 200 FFSLVLASGSGLTVIDNLGQICQSLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVMAFAL 277 (424)
Q Consensus 200 ~~~~~~~~~~~~~~~~~l~~i~~~~g~s~~~~--~~sl~si~~~~gr~~~G~lsd~~g~k~~~~r~~~l~~~~~~~~~~~ 277 (424)
+...+.+..+...+...+|++.+++|.+..+. ..+...++..++.+..|+++||+|||+.+ ..+.++.+++.
T Consensus 9 ~~~~~~~~~~~~~~~~~lp~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~l------~~~~~~~~i~~ 82 (392)
T PRK10473 9 FALVLLYPAGIDMYLVGLPRIAADLNASEAQLHIAFSVYLAGMAAAMLFAGKIADRSGRKPVA------IPGAALFIIAS 82 (392)
T ss_pred HHHHHHHHHHHHHHhhhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhHhHHHHHhCChHHH------HHHHHHHHHHH
Confidence 33344444444455678999999999987654 77888899999999999999999988644 45555666665
Q ss_pred HHHH-hchhHHHHHHHHHHHHHhhhhHhHHHHHHHHhhCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhh
Q 014462 278 LYYA-IGWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIASGIYDYYAEKQAGL 356 (424)
Q Consensus 278 ll~~-~~~~~~l~~~~~l~G~~~G~~~~~~~~~~se~fg~~~~g~~~g~~~~~~~lgs~l~~~~l~g~l~d~~~~~~~~~ 356 (424)
+++. ..+.+.+++..++.|++.+..++...+++.|.++.++|++..++.+....+|..+ +|.+++.+.+..+
T Consensus 83 ~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~i~~~~-~~~i~~~l~~~~g------ 155 (392)
T PRK10473 83 LLCSLAETSSLFLAGRFLQGIGAGCCYVVAFAILRDTLDDRRRAKVLSLLNGITCIIPVL-APVLGHLIMLKFP------ 155 (392)
T ss_pred HHHHHhCcHHHHHHHHHHHHhhhhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhCcC------
Confidence 5544 3445667778889999999999999999999999999999999999999999886 8988888776655
Q ss_pred hhhccCCCCCcccCCCCCCcccCCcchHHHHHHHHHHHHHHHHHHHHHhhh
Q 014462 357 LWKYNGNMLPVSFRDQETPTCLGSICYSITCGIMAGLCIIAMVMSLIVVHR 407 (424)
Q Consensus 357 ~~~~~~~~~~~~~~~~~~~~c~g~~c~~~~f~i~a~~~~~~~~l~~~l~~~ 407 (424)
|+..|++.++++++..++.....++
T Consensus 156 --------------------------~~~~~~~~~~~~~i~~~~~~~~~~~ 180 (392)
T PRK10473 156 --------------------------WQSLFYTMAAMGILVLLLSLFILKE 180 (392)
T ss_pred --------------------------hHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 9999999998888777766554433
No 43
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=99.43 E-value=3.3e-12 Score=132.98 Aligned_cols=169 Identities=17% Similarity=0.234 Sum_probs=139.0
Q ss_pred HHHHHHHHHHHhhhhHHHHHhcHHHHHHH---cCCCchhH--HHHHHHHHhhhhhhhhhhhhhh-hhhcccCchhHHHHH
Q 014462 195 DFLLLFFSLVLASGSGLTVIDNLGQICQS---LGYADTSI--YVSMISIWNFLGRVGGGYFSEA-IVRKFAYPRPVAMAV 268 (424)
Q Consensus 195 ~fwll~~~~~~~~~~~~~~~~~l~~i~~~---~g~s~~~~--~~sl~si~~~~gr~~~G~lsd~-~g~k~~~~r~~~l~~ 268 (424)
.+|.+++..++-..+.+++..++|.++++ +|++..++ +++.+.+...++++.+|+++|| +|||+.+ .+
T Consensus 11 ~~~~l~~~~~~~~~~~~~~~~~L~~yl~~~~~lg~s~~~ag~~~~~~~~~~~~~~~~~G~laDr~~G~~~~l------~~ 84 (475)
T TIGR00924 11 PLFTLFFVELWERFSYYGMQGILAVYLVQQAGLGFSQEQAFIIFGAYSALVYLLTSVGWWFGDRVWGTKKTM------VL 84 (475)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHhhcchHHHH------HH
Confidence 46777778887777788888899999865 68887654 8889999999999999999999 7998765 66
Q ss_pred HHHHHHHHHHHHHhc-hhHHHHHHHHHHHHHhhhhHhHHHHHHHHhhCcch---hhHHHHHHHHHHHHHHHHHHHHHHHH
Q 014462 269 AQVVMAFALLYYAIG-WPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKS---FGALYNFLTLASPAGSLIFSGVIASG 344 (424)
Q Consensus 269 ~~~~~~~~~ll~~~~-~~~~l~~~~~l~G~~~G~~~~~~~~~~se~fg~~~---~g~~~g~~~~~~~lgs~l~~~~l~g~ 344 (424)
+.++.+++.+++... +.+.++++.++.|++.|...+...+.+++.++.++ ++.++++.+.+..+|+.+ ||.+.|.
T Consensus 85 ~~~~~~~g~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~niG~~i-g~~l~g~ 163 (475)
T TIGR00924 85 GGIVLMLGHFMLAMSIYPDLIFYGLGTIAVGSGLFKANPSSMVGKLYERGDMPRRDGGFTLFYMSINIGSFI-SPLLAGV 163 (475)
T ss_pred HHHHHHHHHHHHHhcccHhHHHHHHHHHHhccccccCCHHHHHHHhcCCCCcccccceehhHHHHHHHHHHH-HHHHHHH
Confidence 677777777766543 35566778888999999999999999999998764 888999999999999997 9999999
Q ss_pred HHhhhhhhhhhhhhhccCCCCCcccCCCCCCcccCCcchHHHHHHHHHHHHHHHHHHH
Q 014462 345 IYDYYAEKQAGLLWKYNGNMLPVSFRDQETPTCLGSICYSITCGIMAGLCIIAMVMSL 402 (424)
Q Consensus 345 l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~g~~c~~~~f~i~a~~~~~~~~l~~ 402 (424)
+.+..+ |+..|.+.++.++++.+..+
T Consensus 164 l~~~~g--------------------------------~~~~f~~~~~~~~~~~l~~~ 189 (475)
T TIGR00924 164 IAENYG--------------------------------YHVGFNLAAVGMVIGLLTFF 189 (475)
T ss_pred HHHhcC--------------------------------hHHHHHHHHHHHHHHHHHHH
Confidence 988766 99999998876666554433
No 44
>PRK10504 putative transporter; Provisional
Probab=99.43 E-value=7e-11 Score=122.25 Aligned_cols=154 Identities=10% Similarity=0.020 Sum_probs=118.0
Q ss_pred hhhhHHHHHHHHHHHHhhhhHHHHHhcHHHHHHH-cCCCchhH--HHHHHHHHhhhhhhhhhhhhhhhhhcccCchhHHH
Q 014462 190 ALMKADFLLLFFSLVLASGSGLTVIDNLGQICQS-LGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAM 266 (424)
Q Consensus 190 ~l~~~~fwll~~~~~~~~~~~~~~~~~l~~i~~~-~g~s~~~~--~~sl~si~~~~gr~~~G~lsd~~g~k~~~~r~~~l 266 (424)
+++++.++......++............|++.+. +|.++... ......+...+++++.|++.||+++|+.+
T Consensus 257 l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~r~g~~~~~------ 330 (471)
T PRK10504 257 LFRTRTFSLGLAGSFAGRIGSGMLPFMTPVFLQIGLGFSPFHAGLMMIPMVLGSMGMKRIVVQVVNRFGYRRVL------ 330 (471)
T ss_pred HhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHH------
Confidence 7788888888777777666555555677888875 88887654 66677788888899999999999987654
Q ss_pred HHHHHHHHHHHHHHHh----chhHHHHHHHHHHHHHhhhhHhHHHHHHHHhhCcchhhHHHHHHHHHHHHHHHHHHHHHH
Q 014462 267 AVAQVVMAFALLYYAI----GWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIA 342 (424)
Q Consensus 267 ~~~~~~~~~~~ll~~~----~~~~~l~~~~~l~G~~~G~~~~~~~~~~se~fg~~~~g~~~g~~~~~~~lgs~l~~~~l~ 342 (424)
..+.++++++.+++.. .+...+.+..++.|++.|..++.....+.+.+|.+.+|..+++.++...+|+.+ |+.+.
T Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~i-g~~i~ 409 (471)
T PRK10504 331 VATTLGLALVSLLFMLVALLGWYYLLPFVLFLQGMVNSTRFSSMNTLTLKDLPDNLASSGNSLLSMIMQLSMSI-GVTIA 409 (471)
T ss_pred HHHHHHHHHHHHHHHhccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHhccchHHHHHHHHHHHHHH-HHHHH
Confidence 4444444444443332 122234456677788889888899999999999999999999999999999997 99999
Q ss_pred HHHHhhhh
Q 014462 343 SGIYDYYA 350 (424)
Q Consensus 343 g~l~d~~~ 350 (424)
|.+.+..+
T Consensus 410 g~ll~~~g 417 (471)
T PRK10504 410 GLLLGLFG 417 (471)
T ss_pred HHHHHHhh
Confidence 99988776
No 45
>PRK09952 shikimate transporter; Provisional
Probab=99.43 E-value=1.1e-10 Score=120.17 Aligned_cols=178 Identities=12% Similarity=0.108 Sum_probs=123.2
Q ss_pred hhhhHHHHHHHH-HHHHhhhhHHHHHhcHHHHHHH-cCCCchhH--HHHHHHHHhhhhhhhhhhhhhhhhhcccCchhHH
Q 014462 190 ALMKADFLLLFF-SLVLASGSGLTVIDNLGQICQS-LGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVA 265 (424)
Q Consensus 190 ~l~~~~fwll~~-~~~~~~~~~~~~~~~l~~i~~~-~g~s~~~~--~~sl~si~~~~gr~~~G~lsd~~g~k~~~~r~~~ 265 (424)
.+++++.|...+ ..++.....+....++|.+.++ +|++.... ...+.++.++++.++.|+++||++||+..
T Consensus 245 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~g~s~~~~~~~~~~~g~~~~i~~~~~g~l~Dr~grr~~~----- 319 (438)
T PRK09952 245 LLRHPGAFLKIIALRLCELLTMYIVTAFALNYSTQNLGLPRELFLNIGLLVGGLSCLTIPCFAWLADRFGRRRVY----- 319 (438)
T ss_pred HHHchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHH-----
Confidence 556667776544 3444445556666788887754 78876543 44456777888999999999999988644
Q ss_pred HHHHHHHHHHHHHHH--H--hch-hHHHHHHHHHHHHHhhhhHhHHHHHHHHhhCcchhhHHHHHHHHH-HHHHHHHHHH
Q 014462 266 MAVAQVVMAFALLYY--A--IGW-PGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLA-SPAGSLIFSG 339 (424)
Q Consensus 266 l~~~~~~~~~~~ll~--~--~~~-~~~l~~~~~l~G~~~G~~~~~~~~~~se~fg~~~~g~~~g~~~~~-~~lgs~l~~~ 339 (424)
..+.++.+++.+.+ . ..+ ...+.+..++.+++.+..++..+++++|.||.+.|+++.++.+.. ..+|+.+ +|
T Consensus 320 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~e~~p~~~r~tg~g~~~~~~~~lgg~~-~p 397 (438)
T PRK09952 320 -ITGALIGTLSAFPFFMALEAQSIFWIVFFSIMLANIAHDMVVCVQQPMFTEMFGASYRYSGAGVGYQVASVVGGGF-TP 397 (438)
T ss_pred -HHHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCcchhHHHHhHHHHHHHHHHHHH-HH
Confidence 22222222222211 1 112 233344556668888888888999999999999999999996544 5588886 89
Q ss_pred HHHHHHHhhhhhhhhhhhhhccCCCCCcccCCCCCCcccCCcchHHHHHHHHHHHHHHHHHHHHH
Q 014462 340 VIASGIYDYYAEKQAGLLWKYNGNMLPVSFRDQETPTCLGSICYSITCGIMAGLCIIAMVMSLIV 404 (424)
Q Consensus 340 ~l~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~g~~c~~~~f~i~a~~~~~~~~l~~~l 404 (424)
.+.|.++|..+. .|...+...+++++++.+..+.+
T Consensus 398 ~i~g~l~~~~~~------------------------------~~~~~~~~~~~~~~i~~v~~~~~ 432 (438)
T PRK09952 398 FIAAALVTYFGG------------------------------SWHSVAIYLLAGCLISAMTALLM 432 (438)
T ss_pred HHHHHHHHhcCC------------------------------CchHHHHHHHHHHHHHHHHHHHc
Confidence 999999986541 18888888888888887776654
No 46
>PRK03699 putative transporter; Provisional
Probab=99.43 E-value=1.2e-11 Score=125.15 Aligned_cols=178 Identities=16% Similarity=0.159 Sum_probs=133.9
Q ss_pred hHHHHHHHHHHHHhhhhHHHHHhcHHHHHHH-cCCCchhH--HHHHHHHHhhhhhhhhhhhhhhhhhcccCchhHHHHHH
Q 014462 193 KADFLLLFFSLVLASGSGLTVIDNLGQICQS-LGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVA 269 (424)
Q Consensus 193 ~~~fwll~~~~~~~~~~~~~~~~~l~~i~~~-~g~s~~~~--~~sl~si~~~~gr~~~G~lsd~~g~k~~~~r~~~l~~~ 269 (424)
++.+|.+.+..++.......+.+++|.++++ +|++..+. +.+.+.++..+|+++.|+++||+++|+.. ...
T Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~l------~~~ 277 (394)
T PRK03699 204 GIGVLFLAIAALLYILAQLTFISWVPEYAQKKFGMSLEDAGNLVSNFWMAYMVGMWIFSFIVRFFDLQRIL------TVL 277 (394)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHhhHHHHHHHHHHHHHHHHHHHHHHHhchhhHH------HHH
Confidence 5677888888777777777788899999965 79987654 78888999999999999999999987643 222
Q ss_pred HHHHHHHHHHHH-hchhHHHHHHHHHHHHHhhhhHhHHHHHHHHhhCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 014462 270 QVVMAFALLYYA-IGWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIASGIYDY 348 (424)
Q Consensus 270 ~~~~~~~~ll~~-~~~~~~l~~~~~l~G~~~G~~~~~~~~~~se~fg~~~~g~~~g~~~~~~~lgs~l~~~~l~g~l~d~ 348 (424)
..+.++...++. ..+...+.+..++.|++.+..++...+...+..+ ++.+...+.......+|+.+ +|.+.|.++|.
T Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~i-~p~~~G~l~~~ 355 (394)
T PRK03699 278 AGLALVLMYLFVNTDDPSHLLYAILGLGFFSSAIYTTIITLGSQQTK-VASPKLVNFILTCGTIGTML-TFVVTSPIVAH 355 (394)
T ss_pred HHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHcc-CCCHHHHHHHHHhhhHHHHH-HHHHHHHHHHH
Confidence 223333333332 2344455566778898888888888888888775 55688899999999999997 99999999998
Q ss_pred hhhhhhhhhhhccCCCCCcccCCCCCCcccCCcchHHHHHHHHHHHHHHHHHHHHHhhhhhH
Q 014462 349 YAEKQAGLLWKYNGNMLPVSFRDQETPTCLGSICYSITCGIMAGLCIIAMVMSLIVVHRTKS 410 (424)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~g~~c~~~~f~i~a~~~~~~~~l~~~l~~~~~~ 410 (424)
.+ ++.+|++.+++++++.++.+.+.+-.|+
T Consensus 356 ~g--------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 385 (394)
T PRK03699 356 FG--------------------------------LQAALLTANGLYAVVFVMCILLGFVSKH 385 (394)
T ss_pred hC--------------------------------chhhhhhhHHHHHHHHHHHHHHHHHHHH
Confidence 76 8889999998888887665555443333
No 47
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=99.43 E-value=2.4e-12 Score=128.13 Aligned_cols=171 Identities=15% Similarity=0.157 Sum_probs=141.6
Q ss_pred HHHHHHHHHhhhhHHH----HHhcHHHHHHHcCCCchhH--HHHHHHHHhhhhhhhhhhhhhhhhhcccCchhHHHHHHH
Q 014462 197 LLLFFSLVLASGSGLT----VIDNLGQICQSLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQ 270 (424)
Q Consensus 197 wll~~~~~~~~~~~~~----~~~~l~~i~~~~g~s~~~~--~~sl~si~~~~gr~~~G~lsd~~g~k~~~~r~~~l~~~~ 270 (424)
|-++++.++++.+.+. +...+|.+.++.|+|.++. +.+.+++...++...+|.++||..+|+-+ .+++
T Consensus 28 ~qif~~~fiGYa~fYl~RknF~~a~p~l~e~~~lsk~~lG~i~s~f~i~YG~sKf~~G~~sDr~npr~fm------~~gL 101 (448)
T COG2271 28 IQIFLSIFIGYAAFYLTRKNFNLAMPALIEDGGLSKTQLGILGSAFSITYGVSKFVMGVLSDRSNPRYFM------AFGL 101 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHhHhhccHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCceee------hHHH
Confidence 4555556666555544 3445788889999998876 89999999999999999999999998765 7888
Q ss_pred HHHHHHHHHHHh-chhHHHHHHHHHHHHHhhhhHhHHHHHHHHhhCcchhhHHHHHHHHHHHHHHHHHHHHHH--HHHHh
Q 014462 271 VVMAFALLYYAI-GWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIA--SGIYD 347 (424)
Q Consensus 271 ~~~~~~~ll~~~-~~~~~l~~~~~l~G~~~G~~~~~~~~~~se~fg~~~~g~~~g~~~~~~~lgs~l~~~~l~--g~l~d 347 (424)
++.++..+++.+ .+...+.+..++-|+.-|..|++...++..+|++++||+.+++-+++.++|+.+ -|.+. +.+.+
T Consensus 102 ilsai~nil~Gfs~s~~~~~~l~~lng~fQg~Gwpp~~~~i~~Wfsr~eRG~~~siWn~shNiGGal-~~~~~~la~~~~ 180 (448)
T COG2271 102 ILSAIVNILFGFSPSLFLFAVLWVLNGWFQGMGWPPCARTITHWFSRKERGTWWSIWNTSHNIGGAL-APLVALLAFFAF 180 (448)
T ss_pred HHHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHcCccccCceEEEehhhhhcccch-HHHHHHHHHHHh
Confidence 888888888774 455677788889999999999999999999999999999999999999999998 68888 77776
Q ss_pred hhhhhhhhhhhhccCCCCCcccCCCCCCcccCCcchHHHHHHHHHHHHHHHHHHHHHhh
Q 014462 348 YYAEKQAGLLWKYNGNMLPVSFRDQETPTCLGSICYSITCGIMAGLCIIAMVMSLIVVH 406 (424)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~g~~c~~~~f~i~a~~~~~~~~l~~~l~~ 406 (424)
+.+ ||..|++-++++++-.+..+.+.+
T Consensus 181 ~~~--------------------------------w~~~f~~pgiiaiival~~~~~~r 207 (448)
T COG2271 181 HGG--------------------------------WRAAFYFPGIIAIIVALILLFLLR 207 (448)
T ss_pred ccc--------------------------------hhHHHHHHHHHHHHHHHHHHHHhC
Confidence 655 999999999988877666665543
No 48
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.43 E-value=1.6e-11 Score=124.84 Aligned_cols=181 Identities=14% Similarity=0.099 Sum_probs=134.1
Q ss_pred HHhhhhHHHHHHHHHHHHhhhhHHHHHhcHHHHHHHcCCCchhH--HHHHHHHHhhhhhhhhhhhhhhhhhcccCchhHH
Q 014462 188 PQALMKADFLLLFFSLVLASGSGLTVIDNLGQICQSLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVA 265 (424)
Q Consensus 188 ~~~l~~~~fwll~~~~~~~~~~~~~~~~~l~~i~~~~g~s~~~~--~~sl~si~~~~gr~~~G~lsd~~g~k~~~~r~~~ 265 (424)
++.++++.+|...+..++......+..+++|.+.+++|++..+. +.+...+++.+|++..|+++||++||+... ..
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~--~~ 293 (402)
T TIGR00897 216 TILFTNPNVLLGGMVRIINTIGLFGFAVFLPMFVAELGFSTSEWLQIWGTFFFTNIVFNVIFGIVGDKLGWMNTVR--WF 293 (402)
T ss_pred HHHHcChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHH--HH
Confidence 34788999998888887777777777888999998899987654 667788999999999999999999876430 01
Q ss_pred HHHHHHHHHHHHHHHH---hchhHHHHHHHHHHHHHhhhhHhHHHHHHHHhhCcchhhHHHHHHHHHHHHHHHHHHHHHH
Q 014462 266 MAVAQVVMAFALLYYA---IGWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIA 342 (424)
Q Consensus 266 l~~~~~~~~~~~ll~~---~~~~~~l~~~~~l~G~~~G~~~~~~~~~~se~fg~~~~g~~~g~~~~~~~lgs~l~~~~l~ 342 (424)
..++..+..+...... ..+.+.+++..++.|++.+...+ ....+++.. ++++|+++|+.+....+|+.+ +|.+.
T Consensus 294 ~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~-~~~~~~~~~-~~~~g~~~g~~~~~~~lg~~~-gp~i~ 370 (402)
T TIGR00897 294 GGVGCGIFTLALYYIPQHFGHSFAVALIIAIALGIFLAGYVP-LAAVFPTLA-PKHKGAAMSVLNLSAGLSAFL-APAIA 370 (402)
T ss_pred HHHHHHHHHHHHHHHHHccCCcHHHHHHHHHHHHHHHHHHHH-HHHHHHhhC-cchhHHHHHHHHHHHHHHHHH-HHHHH
Confidence 1111111111111111 12344556677888888877644 455667765 568999999999999999997 99999
Q ss_pred HHHHhhhhhhhhhhhhhccCCCCCcccCCCCCCcccCCcchHHHHHHHHHHHHHHHHHHHHHh
Q 014462 343 SGIYDYYAEKQAGLLWKYNGNMLPVSFRDQETPTCLGSICYSITCGIMAGLCIIAMVMSLIVV 405 (424)
Q Consensus 343 g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~g~~c~~~~f~i~a~~~~~~~~l~~~l~ 405 (424)
|.++|..+ +..+|++.+++.+++.++..+++
T Consensus 371 g~l~~~~g--------------------------------~~~~~~~~a~~~~i~~~~~~~~~ 401 (402)
T TIGR00897 371 VLFIGFFG--------------------------------AIGVVWIFAALYVVSAFLTAFIR 401 (402)
T ss_pred HHHHhhcc--------------------------------hHHHHHHHHHHHHHHHHHHHHhc
Confidence 99999877 88999999998888887776653
No 49
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=99.42 E-value=8.1e-12 Score=130.92 Aligned_cols=173 Identities=15% Similarity=0.181 Sum_probs=132.4
Q ss_pred hhhhH-HHHHHHHHHHHhhhhHHHHHhcHHHHH-HHcCCCchhH--HHHHHHHHhhhhhhhhhhhhhh-hhhcccCchhH
Q 014462 190 ALMKA-DFLLLFFSLVLASGSGLTVIDNLGQIC-QSLGYADTSI--YVSMISIWNFLGRVGGGYFSEA-IVRKFAYPRPV 264 (424)
Q Consensus 190 ~l~~~-~fwll~~~~~~~~~~~~~~~~~l~~i~-~~~g~s~~~~--~~sl~si~~~~gr~~~G~lsd~-~g~k~~~~r~~ 264 (424)
.++++ .+|.++...++...+.+.+..+++.++ +++|++..+. ..+..........+++|+++|| +|||+.+
T Consensus 16 ~~~~p~~~~~~~~~~~~~~~~~y~~~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~~~~G~LaDr~~G~r~~~---- 91 (500)
T PRK09584 16 AFKQPKAFYLIFSIELWERFGYYGLQGIMAVYLVKQLGMSEADSITLFSSFSALVYGLVAIGGWLGDKVLGTKRVI---- 91 (500)
T ss_pred hhcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHH----
Confidence 45666 489999888888888888888898887 5589987654 4444444555556789999999 5998755
Q ss_pred HHHHHHHHHHHHHHHHHhc--hhHHHHHHHHHHHHHhhhhHhHHHHHHHHhhCcch--hhHHHHHHHHHHHHHHHHHHHH
Q 014462 265 AMAVAQVVMAFALLYYAIG--WPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKS--FGALYNFLTLASPAGSLIFSGV 340 (424)
Q Consensus 265 ~l~~~~~~~~~~~ll~~~~--~~~~l~~~~~l~G~~~G~~~~~~~~~~se~fg~~~--~g~~~g~~~~~~~lgs~l~~~~ 340 (424)
.++.++++++.+++... ....+++..++.|++.|...+...+++.++||.++ ++.++++.+++..+|+.+ +|.
T Consensus 92 --~~g~~~~~ig~~l~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~l~~~~f~~~~~~~~~~~~~~~~~~~iG~~~-gp~ 168 (500)
T PRK09584 92 --MLGAIVLAIGYALVAWSGHDAGIVYMGMATIAVGNGLFKANPSSLLSTCYEKDDPRLDGAFTMYYMSINIGSFF-SML 168 (500)
T ss_pred --HHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHhhhcccCCHHHHHHHhcCCCchhhhhcchHHHHHHHHHHHH-HHH
Confidence 56666666666665432 33456677788999999888888899999998653 556889999999999997 999
Q ss_pred HHHHHHhhhhhhhhhhhhhccCCCCCcccCCCCCCcccCCcchHHHHHHHHHHHHHHHHHH
Q 014462 341 IASGIYDYYAEKQAGLLWKYNGNMLPVSFRDQETPTCLGSICYSITCGIMAGLCIIAMVMS 401 (424)
Q Consensus 341 l~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~g~~c~~~~f~i~a~~~~~~~~l~ 401 (424)
+.|++.|..+ |++.|.+.++..+++.+..
T Consensus 169 i~g~l~~~~g--------------------------------~~~~F~i~~i~~~i~~i~~ 197 (500)
T PRK09584 169 ATPWLAAKYG--------------------------------WSVAFALSVVGMLITVVNF 197 (500)
T ss_pred HHHHHHHhhC--------------------------------HHHHHHHHHHHHHHHHHHH
Confidence 9999998776 9999999887666655443
No 50
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.41 E-value=6.9e-12 Score=124.19 Aligned_cols=163 Identities=14% Similarity=0.209 Sum_probs=128.0
Q ss_pred HHHhhhhHHHHHhcHHHHHHHcCCCchhH--HHHHHHHHhhhhhhhhhhhhhhhhhcccCchhHHHHHHHHHHHHHHHHH
Q 014462 203 LVLASGSGLTVIDNLGQICQSLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVMAFALLYY 280 (424)
Q Consensus 203 ~~~~~~~~~~~~~~l~~i~~~~g~s~~~~--~~sl~si~~~~gr~~~G~lsd~~g~k~~~~r~~~l~~~~~~~~~~~ll~ 280 (424)
..+..+..+.....+|.+.+++|.+..+. ..+...++..++++.+|+++||+|||+.+ .++.++.+++.++.
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~d~~G~r~~~------~~~~~~~~~~~~~~ 85 (377)
T TIGR00890 12 MCFTSGYVYTWTLLAPPLGRYFGVGVTAVAIWFTLLLIGLAMSMPVGGLLADKFGPRAVA------MLGGILYGLGFTFY 85 (377)
T ss_pred HHHHhhHHhhhhhHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHcCccchh------HHhHHHHHHHHHHH
Confidence 33333444455567888889999987764 88999999999999999999999999766 55566666666655
Q ss_pred H-hchhHHHHHHHHHHHHHhhhhHhHHHHHHHHhhCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhh
Q 014462 281 A-IGWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIASGIYDYYAEKQAGLLWK 359 (424)
Q Consensus 281 ~-~~~~~~l~~~~~l~G~~~G~~~~~~~~~~se~fg~~~~g~~~g~~~~~~~lgs~l~~~~l~g~l~d~~~~~~~~~~~~ 359 (424)
+ ..+.+.+++..++.|++.|..++.....+.+.++ ++|+++.++...+..+|+.+ ++.+.+.+.+..+
T Consensus 86 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~--------- 154 (377)
T TIGR00890 86 AIADSLAALYLTYGLASAGVGIAYGIALNTAVKWFP-DKRGLASGIIIGGYGLGSFI-LSPLITSVINLEG--------- 154 (377)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHhHHHHHHHHcC-cccHHHHHHHHHhcchhHhH-HHHHHHHHHhccc---------
Confidence 5 3456677788889999999888888888899996 67999999999999999987 5667777666554
Q ss_pred ccCCCCCcccCCCCCCcccCCcchHHHHHHHHHHHHHHHHHHHHHh
Q 014462 360 YNGNMLPVSFRDQETPTCLGSICYSITCGIMAGLCIIAMVMSLIVV 405 (424)
Q Consensus 360 ~~~~~~~~~~~~~~~~~c~g~~c~~~~f~i~a~~~~~~~~l~~~l~ 405 (424)
|++.|++.++++++.++..+.+.
T Consensus 155 -----------------------~~~~f~~~~~~~~~~~~~~~~~~ 177 (377)
T TIGR00890 155 -----------------------VPAAFIYMGIIFLLVIVLGAFLI 177 (377)
T ss_pred -----------------------HHHHHHHHHHHHHHHHHHHHHhe
Confidence 99999999998888776665544
No 51
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.41 E-value=1.8e-11 Score=123.34 Aligned_cols=175 Identities=15% Similarity=0.140 Sum_probs=128.2
Q ss_pred CCHHHhhhhHHHHHHHHHHHHhhhhHHHHHhcHHHHHHHcCCCchhH--HHHHHHHHhhhhhhhhhhhhhhhhhcccCch
Q 014462 185 FTLPQALMKADFLLLFFSLVLASGSGLTVIDNLGQICQSLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPR 262 (424)
Q Consensus 185 ~t~~~~l~~~~fwll~~~~~~~~~~~~~~~~~l~~i~~~~g~s~~~~--~~sl~si~~~~gr~~~G~lsd~~g~k~~~~r 262 (424)
.+.++.++++.+|......++.........+++|.+.++.|.+.... +.++..+.+.++++..|++.||+++|+.+
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l-- 268 (381)
T PRK03633 191 TSIWPMLKLRQARLGVNGCIISGIVLGSLYGLMPLYLNHQGMSDASIGFWMALLVSAGILGQWPIGRLADRFGRLLVL-- 268 (381)
T ss_pred CCHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHcCcHHHH--
Confidence 45677888888886654443333333344556888888888886543 77888899999999999999999987543
Q ss_pred hHHHHHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHhhhhHhHHHHHHHHhhCcchhhHHHHHHHHHHHHHHHHHHHHHH
Q 014462 263 PVAMAVAQVVMAFALLYYAIGWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIA 342 (424)
Q Consensus 263 ~~~l~~~~~~~~~~~ll~~~~~~~~l~~~~~l~G~~~G~~~~~~~~~~se~fg~~~~g~~~g~~~~~~~lgs~l~~~~l~ 342 (424)
..+..++.++.+.+. .....+...++.|++.+...+...+.+.|..++++.+...+..++...+|+.+ +|.+.
T Consensus 269 ----~~~~~~~~~~~~~~~--~~~~~~~~~~l~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~i-gp~~~ 341 (381)
T PRK03633 269 ----RVQVFVVILGSIAML--SQAAMAPALFILGAAGFTLYPVAMAWACEKVEHHELVAMNQALLLSYTVGSLL-GPSFT 341 (381)
T ss_pred ----HHHHHHHHHHHHHHh--hhHHHHHHHHHHHHHHHhHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHH-HHHHH
Confidence 334444444433332 12233445667777777777888888899998888888888888899999997 99999
Q ss_pred HHHHhhhhhhhhhhhhhccCCCCCcccCCCCCCcccCCcchHHHHHHHHHHHHHHHHH
Q 014462 343 SGIYDYYAEKQAGLLWKYNGNMLPVSFRDQETPTCLGSICYSITCGIMAGLCIIAMVM 400 (424)
Q Consensus 343 g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~g~~c~~~~f~i~a~~~~~~~~l 400 (424)
|.+.|..+ +++.|.+.+.+.+++.+.
T Consensus 342 G~l~~~~g--------------------------------~~~~f~~~~~~~l~~~~~ 367 (381)
T PRK03633 342 AMLMQNYS--------------------------------DNLLFIMIASVSFIYLLM 367 (381)
T ss_pred HHHHHHhC--------------------------------ccHHHHHHHHHHHHHHHH
Confidence 99999876 889999988877665443
No 52
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.41 E-value=1.1e-11 Score=121.24 Aligned_cols=170 Identities=22% Similarity=0.286 Sum_probs=137.7
Q ss_pred HHHHHHHHHhhhhHHHHHhcHHHHHHHcCCCchhH--HHHHHHHHhhhhhhhhhhhhhhhhhcccCchhHHHHHHHHHHH
Q 014462 197 LLLFFSLVLASGSGLTVIDNLGQICQSLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVMA 274 (424)
Q Consensus 197 wll~~~~~~~~~~~~~~~~~l~~i~~~~g~s~~~~--~~sl~si~~~~gr~~~G~lsd~~g~k~~~~r~~~l~~~~~~~~ 274 (424)
|.+....++............+.+.++.|.+..+. ..+...++..++.+..|+++||++||+.+ .++..+..
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~d~~g~r~~~------~~~~~~~~ 75 (352)
T cd06174 2 LLLFLGFFLSGLDRGLLSPALPLLAEDLGLSASQAGLIVSAFSLGYALGSLLAGYLSDRFGRRRVL------LLGLLLFA 75 (352)
T ss_pred HHHHHHHHHHHHhhhhhHhhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCchhh------HHHHHHHH
Confidence 44445555555555556667888888888887654 88889999999999999999999998754 56666666
Q ss_pred HHHHHHH-hchhHHHHHHHHHHHHHhhhhHhHHHHHHHHhhCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhh
Q 014462 275 FALLYYA-IGWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIASGIYDYYAEKQ 353 (424)
Q Consensus 275 ~~~ll~~-~~~~~~l~~~~~l~G~~~G~~~~~~~~~~se~fg~~~~g~~~g~~~~~~~lgs~l~~~~l~g~l~d~~~~~~ 353 (424)
++.+.+. ..+.+.+++..++.|++.+..++...+++.|++++|+|++..++......+|+.+ ++.+++.+.|..+
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~--- 151 (352)
T cd06174 76 LGSLLLAFASSLWLLLVGRFLLGLGGGALYPAAAALIAEWFPPKERGRALGLFSAGFGLGALL-GPLLGGLLAESLG--- 151 (352)
T ss_pred HHHHHHHHhccHHHHHHHHHHHHcccccccHhHHHHHHHhCCccchhhhhhHHHHHHHHHHHH-HHHHHHHHHHHhh---
Confidence 6665544 3456678888999999999999999999999999999999999999999999997 8999999988766
Q ss_pred hhhhhhccCCCCCcccCCCCCCcccCCcchHHHHHHHHHHHHHHHHHHHHHh
Q 014462 354 AGLLWKYNGNMLPVSFRDQETPTCLGSICYSITCGIMAGLCIIAMVMSLIVV 405 (424)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~~~~~~c~g~~c~~~~f~i~a~~~~~~~~l~~~l~ 405 (424)
|+..|++.+.+.+++.+....+.
T Consensus 152 -----------------------------~~~~~~~~~~~~~~~~~~~~~~~ 174 (352)
T cd06174 152 -----------------------------WRWLFLILAILGLLLALLLLFLL 174 (352)
T ss_pred -----------------------------HHHHHHHHHHHHHHHHHHHHHHH
Confidence 89999998888887776655443
No 53
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=99.41 E-value=2.3e-10 Score=118.95 Aligned_cols=187 Identities=18% Similarity=0.226 Sum_probs=143.7
Q ss_pred CHHHhhhhHHHHHHHHHHHHhhhhHHHHHhcHHHHHH-HcCCCchhH--HHHHHHHHhhhhhhhhhhhhhhhhhcccCch
Q 014462 186 TLPQALMKADFLLLFFSLVLASGSGLTVIDNLGQICQ-SLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPR 262 (424)
Q Consensus 186 t~~~~l~~~~fwll~~~~~~~~~~~~~~~~~l~~i~~-~~g~s~~~~--~~sl~si~~~~gr~~~G~lsd~~g~k~~~~r 262 (424)
++++..+.++.....+++++..-+..+++.....+.+ ++|++..+. +..+..+.+++|.++.|++.||+|.|.. |
T Consensus 273 t~k~~~~~~~~~~fLia~~l~~dg~~ti~~~~~i~a~~~lg~s~~~l~~~~l~~~i~a~~Ga~~~g~l~~r~g~k~~--~ 350 (477)
T PF11700_consen 273 TFKEIRKLRQLFLFLIAYFLYSDGVNTIISFAGIYATEVLGMSTTQLIVFGLVVQIVAIIGALLFGWLQDRFGPKTK--R 350 (477)
T ss_pred HHHHHHhChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchh--H
Confidence 4556667778788777877766555556655666665 599998775 6677789999999999999999998821 1
Q ss_pred hHHHHHHHHHHHHHHHHHH--------hchhHHHHHHHHHHHHHhhhhHhHHHHHHHHhhCcchhhHHHHHHHHHHHHHH
Q 014462 263 PVAMAVAQVVMAFALLYYA--------IGWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGS 334 (424)
Q Consensus 263 ~~~l~~~~~~~~~~~ll~~--------~~~~~~l~~~~~l~G~~~G~~~~~~~~~~se~fg~~~~g~~~g~~~~~~~lgs 334 (424)
.+...+ .....++...+. ..+.+.+++..++.|++.|..++..-++.+++.|+.+.+..+|+..+.....+
T Consensus 351 ~l~~~l-~~~~~i~~~g~~G~~~~~~g~~~~~~f~~~a~~~G~~~G~~qs~sRs~~~~LiP~g~e~efFgly~i~gk~ss 429 (477)
T PF11700_consen 351 TLLISL-ILWIIIPLYGLFGFWPSFFGLKSPWEFWVLAVLIGLFMGGIQSASRSLFSRLIPPGREAEFFGLYAITGKASS 429 (477)
T ss_pred HHHHHH-HHHHHHHHHHHHHhhhcccCcccHHHHHHHHHHHHHHhhhHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHH
Confidence 111111 111122222222 45567899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhhhhhhhhhhhhccCCCCCcccCCCCCCcccCCcchHHHHHHHHHHHHHHHHHHHHHhhh
Q 014462 335 LIFSGVIASGIYDYYAEKQAGLLWKYNGNMLPVSFRDQETPTCLGSICYSITCGIMAGLCIIAMVMSLIVVHR 407 (424)
Q Consensus 335 ~l~~~~l~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~g~~c~~~~f~i~a~~~~~~~~l~~~l~~~ 407 (424)
.+ ||.+.|.+.|..++ .|..+..+.++.++++++...+..+
T Consensus 430 ~l-GPll~g~i~~~tg~-------------------------------~r~g~~~l~~lf~~gl~ll~~v~~~ 470 (477)
T PF11700_consen 430 WL-GPLLFGLITDATGS-------------------------------QRYGFLFLLVLFLIGLILLFFVDVE 470 (477)
T ss_pred HH-HHHHHHHHHHHhCC-------------------------------chhHHHHHHHHHHHHHHHHhhccch
Confidence 98 99999999998872 7889999999999888777554433
No 54
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.41 E-value=2.1e-11 Score=123.45 Aligned_cols=151 Identities=17% Similarity=0.116 Sum_probs=120.3
Q ss_pred HhcHHHHHHHcCCCchhH--HHHHHHHHhhhhhhhhhhhhhhhhhcccCchhHHHHHHHHHHHHHHHHHH-hchhHHHHH
Q 014462 214 IDNLGQICQSLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVMAFALLYYA-IGWPGEIYV 290 (424)
Q Consensus 214 ~~~l~~i~~~~g~s~~~~--~~sl~si~~~~gr~~~G~lsd~~g~k~~~~r~~~l~~~~~~~~~~~ll~~-~~~~~~l~~ 290 (424)
....|.+.+++|.++.+. ..+...++..++.+..|+++||+|||+.+ ..+.++..++.++.. ..+.+.+++
T Consensus 35 ~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~------~~~~~~~~~~~~~~~~~~~~~~~~~ 108 (406)
T PRK11551 35 GVAAPRMAQEFGLDVAQMGWAFSAGILGLLPGALLGGRLADRIGRKRIL------IVSVALFGLFSLATAQAWDFPSLLV 108 (406)
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhH------HHHHHHHHHHHHHHHHhccHHHHHH
Confidence 345678888899987654 88889999999999999999999998765 444444445444433 455667788
Q ss_pred HHHHHHHHhhhhHhHHHHHHHHhhCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhccCCCCCcccC
Q 014462 291 TTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIASGIYDYYAEKQAGLLWKYNGNMLPVSFR 370 (424)
Q Consensus 291 ~~~l~G~~~G~~~~~~~~~~se~fg~~~~g~~~g~~~~~~~lgs~l~~~~l~g~l~d~~~~~~~~~~~~~~~~~~~~~~~ 370 (424)
..++.|++.|...+...+++.|.+++++++++.++.+....+|..+ ++.+.+.+.+..+
T Consensus 109 ~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~-------------------- 167 (406)
T PRK11551 109 ARLLTGVGLGGALPNLIALTSEAVGPRLRGTAVSLMYCGVPFGGAL-ASVIGVLAAGDAA-------------------- 167 (406)
T ss_pred HHHHHHhhHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHccccC--------------------
Confidence 8999999999999999999999999999999999999999999987 8888777766544
Q ss_pred CCCCCcccCCcchHHHHHHHHHHHHHHHHHHHH
Q 014462 371 DQETPTCLGSICYSITCGIMAGLCIIAMVMSLI 403 (424)
Q Consensus 371 ~~~~~~c~g~~c~~~~f~i~a~~~~~~~~l~~~ 403 (424)
|+..|++.+++.++..++...
T Consensus 168 ------------~~~~~~~~~~~~~~~~~~~~~ 188 (406)
T PRK11551 168 ------------WRHIFYVGGVGPLLLVPLLMR 188 (406)
T ss_pred ------------HHHHHHHHHHHHHHHHHHHHH
Confidence 999999888766665544443
No 55
>PRK03699 putative transporter; Provisional
Probab=99.41 E-value=1.4e-11 Score=124.84 Aligned_cols=171 Identities=12% Similarity=0.105 Sum_probs=133.6
Q ss_pred HHHHHHHHHHHHhhhhHHHHHhcHHHHHHHcCCCchhH--HHHHHHHHhhhhhhhhhhhhhhhhhcccCchhHHHHHHHH
Q 014462 194 ADFLLLFFSLVLASGSGLTVIDNLGQICQSLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQV 271 (424)
Q Consensus 194 ~~fwll~~~~~~~~~~~~~~~~~l~~i~~~~g~s~~~~--~~sl~si~~~~gr~~~G~lsd~~g~k~~~~r~~~l~~~~~ 271 (424)
+-+|..++.+++........-..+|++.+++|++..+. ..+...++..++.+.+|++.||+|||+.+ ..+.+
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~g~~~~~i~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~g~r~~~------~~~~~ 80 (394)
T PRK03699 7 KLTWISFLSYALTGALVIVTGMVMGPIAEYFNLPVSSMSNTFTFLNAGILISIFLNAWLMEIIPLKRQL------IFGFA 80 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhhHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHH------HHHHH
Confidence 44566666666665555556667899999999987654 78888999999999999999999998754 44555
Q ss_pred HHHHHHHHHHh-chhHHHHHHHHHHHHHhhhhHhHHHHHHHHhhCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh
Q 014462 272 VMAFALLYYAI-GWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIASGIYDYYA 350 (424)
Q Consensus 272 ~~~~~~ll~~~-~~~~~l~~~~~l~G~~~G~~~~~~~~~~se~fg~~~~g~~~g~~~~~~~lgs~l~~~~l~g~l~d~~~ 350 (424)
+.+++.++... .+.+.+++..++.|++.|...+.....+.|.++.++++...++.+....+|+.+ +|.+.+.+.+...
T Consensus 81 ~~~i~~~l~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~-~~~~~~~l~~~~~ 159 (394)
T PRK03699 81 LMILAVAGLMFSHSLALFSIAMFVLGVVSGITMSIGTFLITHVYEGKQRGSRLLFTDSFFSMAGMI-FPIIAAYLLARSI 159 (394)
T ss_pred HHHHHHHHHHHcchHHHHHHHHHHHHHhhHhhccchhHHhhhhcccchHHHHHHHHHHHHHHHHHH-HHHHHHHHHhccc
Confidence 55555555443 456677888899999999888888999999999999999999998888999887 7988888765432
Q ss_pred hhhhhhhhhccCCCCCcccCCCCCCcccCCcchHHHHHHHHHHHHHHHHHHH
Q 014462 351 EKQAGLLWKYNGNMLPVSFRDQETPTCLGSICYSITCGIMAGLCIIAMVMSL 402 (424)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~~~~~~~~~c~g~~c~~~~f~i~a~~~~~~~~l~~ 402 (424)
.||+.|.+.+.++++..++.+
T Consensus 160 -------------------------------gw~~~f~~~~~~~~~~~~~~~ 180 (394)
T PRK03699 160 -------------------------------EWYWVYACIGLVYVAIFILTL 180 (394)
T ss_pred -------------------------------cHHHHHHHHHHHHHHHHHHHH
Confidence 199999998887776655443
No 56
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=99.41 E-value=7.5e-12 Score=130.11 Aligned_cols=170 Identities=16% Similarity=0.224 Sum_probs=133.1
Q ss_pred hHHHHHHHHHHHHhhhhHHHHHhcHHHHHHH-cCCCchhH--HHHHHHHHhhhhhhhhhhhhhhh-hhcccCchhHHHHH
Q 014462 193 KADFLLLFFSLVLASGSGLTVIDNLGQICQS-LGYADTSI--YVSMISIWNFLGRVGGGYFSEAI-VRKFAYPRPVAMAV 268 (424)
Q Consensus 193 ~~~fwll~~~~~~~~~~~~~~~~~l~~i~~~-~g~s~~~~--~~sl~si~~~~gr~~~G~lsd~~-g~k~~~~r~~~l~~ 268 (424)
.+.+|.++...++...+.+++...+|.++++ +|+++.++ +.+.+.....++.+.+|+++||+ ||||.+ .+
T Consensus 8 p~~l~~l~~~~~~e~fs~Yg~~~~L~~yL~~~lgls~~~a~~i~~~~~~~~~l~~ligG~LaDRilGrrr~i------li 81 (493)
T PRK15462 8 PRAIYYVVALQIWEYFSFYGMRALLILYLTNQLKYDDNHAYELFSAYCSLVYVTPILGGFLADKVLGNRMAV------ML 81 (493)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcHHHH------HH
Confidence 3456888877777778888888899998765 79987654 77788888899999999999999 988755 66
Q ss_pred HHHHHHHHHHHHHhc--hhHHHHHHHHHHHHHhhhhHhHHHHHHHHhhCcc--hhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 014462 269 AQVVMAFALLYYAIG--WPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLK--SFGALYNFLTLASPAGSLIFSGVIASG 344 (424)
Q Consensus 269 ~~~~~~~~~ll~~~~--~~~~l~~~~~l~G~~~G~~~~~~~~~~se~fg~~--~~g~~~g~~~~~~~lgs~l~~~~l~g~ 344 (424)
+.++++++++++... ....+++...+.+++.|...+...++++|.||++ +|++++++.+....+|+.+ +|.+.|+
T Consensus 82 G~il~~lg~lll~~~~~~~~~~~l~l~li~iG~G~~~~~~~alv~elfp~~~~~R~sgf~i~Y~~~nlG~~i-ap~l~g~ 160 (493)
T PRK15462 82 GALLMAIGHVVLGASEIHPSFLYLSLAIIVCGYGLFKSNVSCLLGELYEPTDPRRDGGFSLMYAAGNVGSII-APIACGY 160 (493)
T ss_pred HHHHHHHHHHHHHHhhcchhHHHHHHHHHHHhcccccccHHHHHHHHCCCCCccccceehHHHHHHHHHHHH-HHHHHHH
Confidence 777777776665432 2234555666667778887787889999999876 6899999999999999997 9999999
Q ss_pred HHhhhhhhhhhhhhhccCCCCCcccCCCCCCcccCCcchHHHHHHHHHHHHHHHHHH
Q 014462 345 IYDYYAEKQAGLLWKYNGNMLPVSFRDQETPTCLGSICYSITCGIMAGLCIIAMVMS 401 (424)
Q Consensus 345 l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~g~~c~~~~f~i~a~~~~~~~~l~ 401 (424)
+.+..+ |+..|.+.+...+++.+..
T Consensus 161 L~~~~G--------------------------------w~~~F~iaaigm~l~li~~ 185 (493)
T PRK15462 161 AQEEYS--------------------------------WAMGFGLAAVGMIAGLVIF 185 (493)
T ss_pred HHhhhC--------------------------------hHHHHHHHHHHHHHHHHHH
Confidence 987766 9999998776555554443
No 57
>TIGR00895 2A0115 benzoate transport.
Probab=99.41 E-value=7.3e-12 Score=125.10 Aligned_cols=157 Identities=15% Similarity=0.115 Sum_probs=124.3
Q ss_pred HHHHHhcHHHHHHHcCCCchhH--HHHHHHHHhhhhhhhhhhhhhhhhhcccCchhHHHHHHHHHHHHHHHHHH-hchhH
Q 014462 210 GLTVIDNLGQICQSLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVMAFALLYYA-IGWPG 286 (424)
Q Consensus 210 ~~~~~~~l~~i~~~~g~s~~~~--~~sl~si~~~~gr~~~G~lsd~~g~k~~~~r~~~l~~~~~~~~~~~ll~~-~~~~~ 286 (424)
.......+|.+.+++|.+..+. +.+...++..++.+..|+++||++||+.+ ..+.++.+++.+++. ..+.+
T Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~------~~~~~~~~~~~~~~~~~~~~~ 106 (398)
T TIGR00895 33 LAAMGFAAPAISAEWGLDPVQLGFLFSAGLIGMAFGALFFGPLADRIGRKRVL------LWSILLFSVFTLLCALATNVT 106 (398)
T ss_pred HHHHHhhHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHHhHHHHHHhhhHHHH------HHHHHHHHHHHHHHHHccchH
Confidence 3344556788888899987654 77888899999999999999999988654 445555555555444 34556
Q ss_pred HHHHHHHHHHHHhhhhHhHHHHHHHHhhCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhccCCCCC
Q 014462 287 EIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIASGIYDYYAEKQAGLLWKYNGNMLP 366 (424)
Q Consensus 287 ~l~~~~~l~G~~~G~~~~~~~~~~se~fg~~~~g~~~g~~~~~~~lgs~l~~~~l~g~l~d~~~~~~~~~~~~~~~~~~~ 366 (424)
.+++..++.|++.|..++...++++|.++.+++++..++...+..+|+.+ ++.+.|.+.+..+
T Consensus 107 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~-~~~~~~~l~~~~g---------------- 169 (398)
T TIGR00895 107 QLLILRFLAGLGLGGLMPNLNALVSEYAPKRFRGTAVGLMFCGYPIGAAV-GGFLAGWLIPVFG---------------- 169 (398)
T ss_pred HHHHHHHHHhcccccchhhHHHHHHHHcCHHhhchhHhhHhhHHHHHHHH-HHHHHHHHhhccc----------------
Confidence 67788899999999999999999999999999999999999999999997 8999999887665
Q ss_pred cccCCCCCCcccCCcchHHHHHHHHHHHHHHHHHHHHHh
Q 014462 367 VSFRDQETPTCLGSICYSITCGIMAGLCIIAMVMSLIVV 405 (424)
Q Consensus 367 ~~~~~~~~~~c~g~~c~~~~f~i~a~~~~~~~~l~~~l~ 405 (424)
|+..|++.+.++++..++.....
T Consensus 170 ----------------~~~~~~~~~~~~~~~~~~~~~~~ 192 (398)
T TIGR00895 170 ----------------WRSLFYVGGIAPLLLLLLLMRFL 192 (398)
T ss_pred ----------------ceeehhhhhhHHHHHHHHHHHhC
Confidence 88888888766666555544433
No 58
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=99.40 E-value=2e-11 Score=123.36 Aligned_cols=170 Identities=9% Similarity=0.105 Sum_probs=131.6
Q ss_pred HHHHHHHHHhhhhHHHHHhcHHHHHHHcCCCchhH--HHHHHHHHhhhhhhhhhhhhhhhhhcccCchhHHHHHHHHHHH
Q 014462 197 LLLFFSLVLASGSGLTVIDNLGQICQSLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVMA 274 (424)
Q Consensus 197 wll~~~~~~~~~~~~~~~~~l~~i~~~~g~s~~~~--~~sl~si~~~~gr~~~G~lsd~~g~k~~~~r~~~l~~~~~~~~ 274 (424)
+......++.......+...+|++.+++|.+..+. ..+...++..++.+..|+++||+|||+.+ ..+.++.+
T Consensus 11 ~~~~~~~~~~~~~~~~~~p~~~~i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~grr~~~------~~~~~~~~ 84 (394)
T PRK11652 11 FMLVLLVAVGQMAQTIYVPAIADMARDLNVREGAVQAVMAAYLLTYGLSQLFYGPLSDRVGRRPVI------LVGMSIFI 84 (394)
T ss_pred HHHHHHHHHHHHHHHHHhccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHH------HHHHHHHH
Confidence 44444455555555556667899999999987654 78889999999999999999999998754 44555555
Q ss_pred HHHHHHH-hchhHHHHHHHHHHHHHhhhhHhHHHHHHHHhhCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhh
Q 014462 275 FALLYYA-IGWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIASGIYDYYAEKQ 353 (424)
Q Consensus 275 ~~~ll~~-~~~~~~l~~~~~l~G~~~G~~~~~~~~~~se~fg~~~~g~~~g~~~~~~~lgs~l~~~~l~g~l~d~~~~~~ 353 (424)
++.+... ..+.+.+++..++.|++.+...+.......|.++.++++.+.++.+++..++..+ +|.+.|.+.+..+
T Consensus 85 ~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~i~~~l~~~~g--- 160 (394)
T PRK11652 85 LGTLVALFAHSLTVLIAASAIQGLGTGVGGVMARTLPRDLYEGTQLRHANSLLNMGILVSPLL-APLIGGLLTTLFG--- 160 (394)
T ss_pred HHHHHHHHHccHHHHHHHHHHHHhhhhHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhccC---
Confidence 5554443 3456677888899999988888888888999999899999999999999999987 8999998887665
Q ss_pred hhhhhhccCCCCCcccCCCCCCcccCCcchHHHHHHHHHHHHHHHHHHHHHh
Q 014462 354 AGLLWKYNGNMLPVSFRDQETPTCLGSICYSITCGIMAGLCIIAMVMSLIVV 405 (424)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~~~~~~c~g~~c~~~~f~i~a~~~~~~~~l~~~l~ 405 (424)
|+++|++.++++++..++..+..
T Consensus 161 -----------------------------~~~~f~~~~~~~~~~~~~~~~~~ 183 (394)
T PRK11652 161 -----------------------------WRACYLFLLLLGAGVTFSMARWM 183 (394)
T ss_pred -----------------------------hHHHHHHHHHHHHHHHHHHHHhC
Confidence 99999998877766555444433
No 59
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.40 E-value=1.6e-10 Score=120.64 Aligned_cols=158 Identities=11% Similarity=0.060 Sum_probs=106.4
Q ss_pred CHHHhhhh-HHHHHHH-HHHHHhhhhHHHHHhcHHHHHHH-cCCCchhH--HHHHHHHHhhhhhhhhhhhhhhhhhcccC
Q 014462 186 TLPQALMK-ADFLLLF-FSLVLASGSGLTVIDNLGQICQS-LGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAY 260 (424)
Q Consensus 186 t~~~~l~~-~~fwll~-~~~~~~~~~~~~~~~~l~~i~~~-~g~s~~~~--~~sl~si~~~~gr~~~G~lsd~~g~k~~~ 260 (424)
++++.+++ ++.+... ...++.....+++..++|+++++ +|++.... ..+...++..+|++.+|+++||+|||+.+
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~ 319 (490)
T PRK10642 240 SFKEIATKHWRSLLTCIGLVIATNVTYYMLLTYMPSYLSHNLHYSEDHGVLIIIAIMIGMLFVQPVMGLLSDRFGRRPFV 319 (490)
T ss_pred CHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHH
Confidence 35555553 2333332 22333445556677789998865 78876543 56677888999999999999999998643
Q ss_pred chhHHHHHHHHH-HHHHH--HHHHh-chhHHHHHHHHHHHHHhhhhHhHHHHHHHHhhCcchhhHHHHHHHHHHHHHHHH
Q 014462 261 PRPVAMAVAQVV-MAFAL--LYYAI-GWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLI 336 (424)
Q Consensus 261 ~r~~~l~~~~~~-~~~~~--ll~~~-~~~~~l~~~~~l~G~~~G~~~~~~~~~~se~fg~~~~g~~~g~~~~~~~lgs~l 336 (424)
.++.++ ...+. +.... .+...++++.++.|++.+..++....+++|+||++.||++.++.+....+++.+
T Consensus 320 ------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~~~p~~~Rg~~~g~~~~~~~~~g~~ 393 (490)
T PRK10642 320 ------ILGSVALFVLAIPAFILINSNVIGLIFAGLLMLAVILNCFTGVMASTLPAMFPTHIRYSALAAAFNISVLVAGL 393 (490)
T ss_pred ------HHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCccchHHHHHHHHHHHHHHHH
Confidence 222221 11111 11222 234456667778888888888888899999999999999999865555666665
Q ss_pred HHHHHHHHHHhhhh
Q 014462 337 FSGVIASGIYDYYA 350 (424)
Q Consensus 337 ~~~~l~g~l~d~~~ 350 (424)
+|.+.|++.+..+
T Consensus 394 -~p~i~g~l~~~~~ 406 (490)
T PRK10642 394 -TPTLAAWLVESTQ 406 (490)
T ss_pred -HHHHHHHHHHHhC
Confidence 8999999887654
No 60
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=99.39 E-value=2.8e-11 Score=121.43 Aligned_cols=147 Identities=12% Similarity=0.179 Sum_probs=116.4
Q ss_pred HHHHHHHHHhhhhHHHHHhcHHHHHHHcCCCchhH--HHHHHHHHhhhhhhhhhhhhhhhhhcccCchhHHHHHHHHHHH
Q 014462 197 LLLFFSLVLASGSGLTVIDNLGQICQSLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVMA 274 (424)
Q Consensus 197 wll~~~~~~~~~~~~~~~~~l~~i~~~~g~s~~~~--~~sl~si~~~~gr~~~G~lsd~~g~k~~~~r~~~l~~~~~~~~ 274 (424)
...++..++............+++.+++|.+..+. ..++..++..++.+..|+++||+|||+.+ ..+.++.+
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~~------~~~~~~~~ 88 (405)
T TIGR00891 15 SAAWLGWLLDAFDFFLVALVLAEVAGEFGLTTVDAASLISAALISRWFGALMFGLWGDRYGRRLPM------VTSIVLFS 88 (405)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHH------HHHHHHHH
Confidence 34444444444444455566788888899987654 88889999999999999999999998754 44555555
Q ss_pred HHHHHHH-hchhHHHHHHHHHHHHHhhhhHhHHHHHHHHhhCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh
Q 014462 275 FALLYYA-IGWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIASGIYDYYA 350 (424)
Q Consensus 275 ~~~ll~~-~~~~~~l~~~~~l~G~~~G~~~~~~~~~~se~fg~~~~g~~~g~~~~~~~lgs~l~~~~l~g~l~d~~~ 350 (424)
++.++.. ..+.+.+++..++.|++.|..++...+++.|.++.++++++.++.+++..+|..+ ++.+.+.+.+..+
T Consensus 89 ~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~-~~~l~~~l~~~~~ 164 (405)
T TIGR00891 89 AGTLACGFAPGYITMFIARLVIGIGMGGEYGSSAAYVIESWPKHLRNKASGLLISGYAVGAVV-AAQVYSLVVPVWG 164 (405)
T ss_pred HHHHHHHHhccHHHHHHHHHHHHhhhhhhhHHHHHHHHHhCChhhhhHHHHHHHHHHHHHHHH-HHHHHHHHHHhcC
Confidence 5555544 3456778889999999999999999999999999999999999999999999997 8998888776543
No 61
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=99.39 E-value=2.2e-11 Score=123.59 Aligned_cols=155 Identities=10% Similarity=0.025 Sum_probs=123.3
Q ss_pred HHHHhcHHHHHHHcCCCchhH--HHHHHHHHhhhhhhhhhhhhhhhhhcccCchhHHHHHHHHHHHHHHHHHH-hchhHH
Q 014462 211 LTVIDNLGQICQSLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVMAFALLYYA-IGWPGE 287 (424)
Q Consensus 211 ~~~~~~l~~i~~~~g~s~~~~--~~sl~si~~~~gr~~~G~lsd~~g~k~~~~r~~~l~~~~~~~~~~~ll~~-~~~~~~ 287 (424)
..+...++++.+++|.+.... ..+...++..++.+..|+++||+|||+.+ .++..+.+++.++.. ..+.+.
T Consensus 30 ~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~dr~g~r~~l------~~~~~~~~~~~~~~~~~~~~~~ 103 (406)
T PRK15402 30 DMIQPGMLAVVEDFNAGAEWVPTSMTAYLAGGMFLQWLLGPLSDRIGRRPVM------LAGVAFFILTCLAILLAQSIEQ 103 (406)
T ss_pred hhHhcchHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHH------HHHHHHHHHHHHHHHHHccHHH
Confidence 344556788889999987654 78889999999999999999999998754 444555555554443 345667
Q ss_pred HHHHHHHHHHHhhhhHhHHHHHHHHhhCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhccCCCCCc
Q 014462 288 IYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIASGIYDYYAEKQAGLLWKYNGNMLPV 367 (424)
Q Consensus 288 l~~~~~l~G~~~G~~~~~~~~~~se~fg~~~~g~~~g~~~~~~~lgs~l~~~~l~g~l~d~~~~~~~~~~~~~~~~~~~~ 367 (424)
+++..++.|++.+...+...+.+.|.++++++++..++......+|..+ +|.+.+.+.+..+
T Consensus 104 l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~i~~~l~~~~~----------------- 165 (406)
T PRK15402 104 FTLLRFLQGIGLCFIGAVGYAAIQESFEEADAIKITALMANVALLAPLL-GPLVGAALIHVLP----------------- 165 (406)
T ss_pred HHHHHHHHHhHhhhHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHccC-----------------
Confidence 7888899999999888888999999999999999999888888888876 8999998887655
Q ss_pred ccCCCCCCcccCCcchHHHHHHHHHHHHHHHHHHHHH
Q 014462 368 SFRDQETPTCLGSICYSITCGIMAGLCIIAMVMSLIV 404 (424)
Q Consensus 368 ~~~~~~~~~c~g~~c~~~~f~i~a~~~~~~~~l~~~l 404 (424)
|+++|++.+++++++.+.....
T Consensus 166 ---------------w~~~~~~~~~~~~~~~~~~~~~ 187 (406)
T PRK15402 166 ---------------WRGMFVLFAALAALSFFGLWRA 187 (406)
T ss_pred ---------------ccHHHHHHHHHHHHHHHHHHHh
Confidence 9999999998888776655443
No 62
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.39 E-value=5.1e-12 Score=128.98 Aligned_cols=180 Identities=15% Similarity=0.137 Sum_probs=130.3
Q ss_pred HHHhhhhHHHHHHHHHHHHhhhhHHHHHhcHHHHHHHc----CCCchh--HHHHHHHHHhhhhhhhhhhhhhhhhhcccC
Q 014462 187 LPQALMKADFLLLFFSLVLASGSGLTVIDNLGQICQSL----GYADTS--IYVSMISIWNFLGRVGGGYFSEAIVRKFAY 260 (424)
Q Consensus 187 ~~~~l~~~~fwll~~~~~~~~~~~~~~~~~l~~i~~~~----g~s~~~--~~~sl~si~~~~gr~~~G~lsd~~g~k~~~ 260 (424)
.++.++++.+|.+.+..++..........++|.+..+. +.+... .+.++..+...++.+.+|+++||+++|+..
T Consensus 216 ~~~~l~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~ 295 (420)
T PRK09528 216 ALALLKLPKFWFLVLYVIGVACFYDVFDQQFPNFFASFFATPEQGTRVFGYLNSFQVFLEALIMFFAPFIINRIGAKNAL 295 (420)
T ss_pred HHHHccCCCeEeehHHHHHHHHHHHHHHHHHHHHHHHHHhccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcchhh
Confidence 45578888888766544443333333344566665442 343332 366777888889999999999999998754
Q ss_pred chhHHHHHHHHHHHHHHHHHH-hchhHHHHHHHHHHHHHhhhhHhHHHHHHHHhhCcchhhHHHHH-HHHHHHHHHHHHH
Q 014462 261 PRPVAMAVAQVVMAFALLYYA-IGWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNF-LTLASPAGSLIFS 338 (424)
Q Consensus 261 ~r~~~l~~~~~~~~~~~ll~~-~~~~~~l~~~~~l~G~~~G~~~~~~~~~~se~fg~~~~g~~~g~-~~~~~~lgs~l~~ 338 (424)
..+.++.+++.+++. ..+++.+++..++.|++++........++.+.+|.+.+++.++. .++...+|+.+ +
T Consensus 296 ------~~~~~l~~~~~~l~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~lg~~i-g 368 (420)
T PRK09528 296 ------LLAGTIMAVRIIGSGFATGPLEVSILKLLHAFEVPFLLVGVFKYITLNFDVRLSATIYLVGFQFAKQLGAVF-L 368 (420)
T ss_pred ------HHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccceeeeeeehHHHHHHHHHHH-H
Confidence 444445555544444 34566677778888888888877788899999999999988876 56778899987 8
Q ss_pred HHHHHHHHhhhhhhhhhhhhhccCCCCCcccCCCCCCcccCCcchHHHHHHHHHHHHHHHHHHHHHh
Q 014462 339 GVIASGIYDYYAEKQAGLLWKYNGNMLPVSFRDQETPTCLGSICYSITCGIMAGLCIIAMVMSLIVV 405 (424)
Q Consensus 339 ~~l~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~g~~c~~~~f~i~a~~~~~~~~l~~~l~ 405 (424)
+.+.|.++|..| |+.+|.+.+++.+++.++.....
T Consensus 369 ~~~~G~l~~~~G--------------------------------~~~~f~~~~~~~~i~~~~~~~~~ 403 (420)
T PRK09528 369 STLAGNLYDSIG--------------------------------FQGTYLILGGIVLLFTLISVFTL 403 (420)
T ss_pred HHHHHHHHHhhC--------------------------------chHHHHHHHHHHHHHHHHHHHHh
Confidence 999999999877 99999999998887776655443
No 63
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.39 E-value=2.6e-11 Score=120.84 Aligned_cols=178 Identities=17% Similarity=0.131 Sum_probs=129.1
Q ss_pred CHHHhhhhHHHHHHHHHHHHhhhhHHHHHhcHHHHHH-HcCCCchhH--HHHHHHHHhhhhhhhhhhhhhhhhhcccCch
Q 014462 186 TLPQALMKADFLLLFFSLVLASGSGLTVIDNLGQICQ-SLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPR 262 (424)
Q Consensus 186 t~~~~l~~~~fwll~~~~~~~~~~~~~~~~~l~~i~~-~~g~s~~~~--~~sl~si~~~~gr~~~G~lsd~~g~k~~~~r 262 (424)
+.++.++++++|.++...++..+.......++|.+.+ ++|.+.... +.+...+....+++..|++.||+++|+..
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~-- 268 (375)
T TIGR00899 191 EVRGLLASRDTRLLFVACTLMWGCNILYIINMPLLIIHELGLPDKLAGLMMGTAAGLEIPFMLLAGYLIKRFGKRRLM-- 268 (375)
T ss_pred hhhhhhcCcchHHHHHHHHHHHHHHHHHHhhhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhcchhHH--
Confidence 3445677888887776665555544445566777764 578887654 55556667788899999999999987643
Q ss_pred hHHHHHHHHHHHHHHHHHH-hchhHHHHHHHHHHHHHhhhhHhHHHHHHHHhhCcchhhHHHHHHHHHHHHHHHHHHHHH
Q 014462 263 PVAMAVAQVVMAFALLYYA-IGWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVI 341 (424)
Q Consensus 263 ~~~l~~~~~~~~~~~ll~~-~~~~~~l~~~~~l~G~~~G~~~~~~~~~~se~fg~~~~g~~~g~~~~~~~lgs~l~~~~l 341 (424)
.++.++..+..+.+. ..+.+.+++..++.|++.|...+.....+.|.+|. ++++..++.+....+|+.+ +|.+
T Consensus 269 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~-g~~~ 342 (375)
T TIGR00899 269 ----LLAALAGVAFYTGLAADNSLWALLMLQLLNAIFIGILAGIGMLYFQDLMPG-RAGAATTLYTNTGRVGWII-AGSV 342 (375)
T ss_pred ----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcc-hhhHHHHHHHHHHHHHHHH-HHHH
Confidence 223333333332222 23445556677788999998888888899999965 5689999999999999997 9999
Q ss_pred HHHHHhhhhhhhhhhhhhccCCCCCcccCCCCCCcccCCcchHHHHHHHHHHHHHHHHHHHH
Q 014462 342 ASGIYDYYAEKQAGLLWKYNGNMLPVSFRDQETPTCLGSICYSITCGIMAGLCIIAMVMSLI 403 (424)
Q Consensus 342 ~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~g~~c~~~~f~i~a~~~~~~~~l~~~ 403 (424)
.|.+.|..+ |+..|++.+++++++.++...
T Consensus 343 ~g~~~~~~g--------------------------------~~~~~~~~~~~~~~~~~~~~~ 372 (375)
T TIGR00899 343 GGILAERWS--------------------------------YHAVYWFAIVMLIVALFCLLL 372 (375)
T ss_pred HHHHHHhcc--------------------------------chhHHHHHHHHHHHHHHHHhe
Confidence 999998776 899999999888887776543
No 64
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=99.39 E-value=1.4e-11 Score=123.26 Aligned_cols=156 Identities=18% Similarity=0.252 Sum_probs=128.7
Q ss_pred HHHhcHHHHHHHcCCCchhH--HHHHHHHHhhhhhhhhhhhhhhhhhcccCchhHHHHHHHHHHHHHHHHHH-hchhHHH
Q 014462 212 TVIDNLGQICQSLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVMAFALLYYA-IGWPGEI 288 (424)
Q Consensus 212 ~~~~~l~~i~~~~g~s~~~~--~~sl~si~~~~gr~~~G~lsd~~g~k~~~~r~~~l~~~~~~~~~~~ll~~-~~~~~~l 288 (424)
.+...+|.+.+++|.+..+. ..+...++..++++..|+++||+|||+.+ ..+.++.+++.+++. ..+.+.+
T Consensus 9 ~~~p~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~------~~~~~~~~i~~~~~~~~~~~~~~ 82 (377)
T PRK11102 9 MYLPALPVIAADFGVSAGSVQMTLSAYILGFAIGQLFYGPMADSFGRKPVI------LGGTLVFALAAVACALAQTIDQL 82 (377)
T ss_pred HHhccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhchHHhhcCChHHH------HHHHHHHHHHHHHHHHHccHHHH
Confidence 44567889999999987654 78889999999999999999999987644 555566666655544 3456677
Q ss_pred HHHHHHHHHHhhhhHhHHHHHHHHhhCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhccCCCCCcc
Q 014462 289 YVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIASGIYDYYAEKQAGLLWKYNGNMLPVS 368 (424)
Q Consensus 289 ~~~~~l~G~~~G~~~~~~~~~~se~fg~~~~g~~~g~~~~~~~lgs~l~~~~l~g~l~d~~~~~~~~~~~~~~~~~~~~~ 368 (424)
++..++.|++.+...+...+++.|.++.+++++..++.+....+|..+ +|.+.+.+.+..+
T Consensus 83 ~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~~~~~~~l~~~~~------------------ 143 (377)
T PRK11102 83 IYMRFLHGLAAAAASVVINALMRDMFPKEEFSRMMSFVTLVMTIAPLL-APIIGGWLLVWFS------------------ 143 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHcC------------------
Confidence 888999999999999999999999999999999999999999999997 8999999888766
Q ss_pred cCCCCCCcccCCcchHHHHHHHHHHHHHHHHHHHHHhh
Q 014462 369 FRDQETPTCLGSICYSITCGIMAGLCIIAMVMSLIVVH 406 (424)
Q Consensus 369 ~~~~~~~~c~g~~c~~~~f~i~a~~~~~~~~l~~~l~~ 406 (424)
|++.|++.+.++++..++..+..+
T Consensus 144 --------------~~~~~~~~~~~~~~~~~~~~~~~~ 167 (377)
T PRK11102 144 --------------WHAIFWVLALAAILAAALVFFFIP 167 (377)
T ss_pred --------------hHHHHHHHHHHHHHHHHHHHHhCC
Confidence 999999999888877666554433
No 65
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=99.39 E-value=1.7e-11 Score=126.11 Aligned_cols=174 Identities=14% Similarity=0.143 Sum_probs=125.4
Q ss_pred HHHHHHHHHHHhhhhHHHHHhcHHHHHHHcCCCchhH--HHHHHHHHhhhhhhhhhhhhhhhhhcccCchhHHHHHHHHH
Q 014462 195 DFLLLFFSLVLASGSGLTVIDNLGQICQSLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVV 272 (424)
Q Consensus 195 ~fwll~~~~~~~~~~~~~~~~~l~~i~~~~g~s~~~~--~~sl~si~~~~gr~~~G~lsd~~g~k~~~~r~~~l~~~~~~ 272 (424)
.+|.+++..++.......+...+|.+. +.|.+..+. ..+...++..++.+..|+++||+|||+.+ ..+.++
T Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~p~~~-~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~~~~~------~~~~~~ 100 (438)
T TIGR00712 28 VFLGIFFGYAAYYLVRKNFALAMPYLV-EQGFSKGELGFALSAISIAYGFSKFIMGSVSDRSNPRVFL------PAGLIL 100 (438)
T ss_pred HHHHHHHHHHHHHHHhccHHhhhHHHH-HcCCCHhHhHHHHHHHHHHHHHhhhccchhhhccCCceeh------HHHHHH
Confidence 334444433333333333344566555 468887654 88899999999999999999999998755 445555
Q ss_pred HHHHHHHHHh-----chhHHHHHHHHHHHHHhhhhHhHHHHHHHHhhCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 014462 273 MAFALLYYAI-----GWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIASGIYD 347 (424)
Q Consensus 273 ~~~~~ll~~~-----~~~~~l~~~~~l~G~~~G~~~~~~~~~~se~fg~~~~g~~~g~~~~~~~lgs~l~~~~l~g~l~d 347 (424)
.+++.+++.. .+...+++..++.|++.|..++.....+.|++|+++||++.++.+++..+|+.+ ++.+.+.+.+
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~~-~~~l~~~~~~ 179 (438)
T TIGR00712 101 SAAVMLLMGFVPWATSSIAIMFVLLFLNGWFQGMGWPPCGRTMVHWWSQSERGTIVSIWNCAHNIGGGI-PPLLVLLGMA 179 (438)
T ss_pred HHHHHHHHhccccccchHHHHHHHHHHHHHHhhcchHHHHHHHHHhcCcccchhHHHHHHHHHHhHhHH-HHHHHHHHHH
Confidence 5555544332 233456677888999999999888999999999999999999999999999987 7877776554
Q ss_pred hhhhhhhhhhhhccCCCCCcccCCCCCCcccCCcchHHHHHHHHHHHHHHHHHHHHHhhh
Q 014462 348 YYAEKQAGLLWKYNGNMLPVSFRDQETPTCLGSICYSITCGIMAGLCIIAMVMSLIVVHR 407 (424)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~g~~c~~~~f~i~a~~~~~~~~l~~~l~~~ 407 (424)
... .||.+|++.+.++++..++.+++.++
T Consensus 180 ~~~-------------------------------~w~~~f~~~~~~~~i~~~~~~~~~~~ 208 (438)
T TIGR00712 180 WFN-------------------------------DWHAALYFPAICAIIVALFAFAMMRD 208 (438)
T ss_pred Hhh-------------------------------hhHHHHHHHHHHHHHHHHHHHHhccC
Confidence 322 19999999999888876666555433
No 66
>PRK03545 putative arabinose transporter; Provisional
Probab=99.38 E-value=3e-11 Score=121.99 Aligned_cols=179 Identities=13% Similarity=0.137 Sum_probs=134.0
Q ss_pred CHHHhhhhHHHHHHHHHHHHhhhhHHHHHhcHHHHHHH-cCCCchhH--HHHHHHHHhhhhhhhhhhhhhhhhhcccCch
Q 014462 186 TLPQALMKADFLLLFFSLVLASGSGLTVIDNLGQICQS-LGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPR 262 (424)
Q Consensus 186 t~~~~l~~~~fwll~~~~~~~~~~~~~~~~~l~~i~~~-~g~s~~~~--~~sl~si~~~~gr~~~G~lsd~~g~k~~~~r 262 (424)
+.++.++++.+|..+...++.........++++++.++ .|++.... +.++.++++.+|++..|+++||+++|+ .
T Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~-~-- 273 (390)
T PRK03545 197 SLPLLFRRPALVSLYLLTVVVVTAHFTAYSYIEPFVQQVAGLSENFATLLLLLFGGAGIIGSVLFSRLGNRHPSGF-L-- 273 (390)
T ss_pred HHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHHHHHHHHHHHHHhhccchhH-H--
Confidence 46678899999877666666555555555667777766 68876543 777888999999999999999998653 2
Q ss_pred hHHHHHHHHHHHHHHHHH-H-hchhHHHHHHHHHHHHHhhhhHhHHHHHHHHhhCcchhhHHHHHHHHHHHHHHHHHHHH
Q 014462 263 PVAMAVAQVVMAFALLYY-A-IGWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGV 340 (424)
Q Consensus 263 ~~~l~~~~~~~~~~~ll~-~-~~~~~~l~~~~~l~G~~~G~~~~~~~~~~se~fg~~~~g~~~g~~~~~~~lgs~l~~~~ 340 (424)
.++..++.++...+ . ..+...+++..++.|++.+.......+.+.+..| +++|.+.++.+....+|..+ ||.
T Consensus 274 ----~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~-G~~ 347 (390)
T PRK03545 274 ----LIAIALLLVCLLLLLPAANSEWHLSVLSIFWGIAIMCIGLAMQVKVLKLAP-DATDVAMALFSGIFNIGIGA-GAL 347 (390)
T ss_pred ----HHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHhcchHHHHHHHHHhCC-CcHHHHHHHHHHHHHHHHHH-HHH
Confidence 22223333333222 2 3344566677888899887777777788888876 67899999999999999997 999
Q ss_pred HHHHHHhhhhhhhhhhhhhccCCCCCcccCCCCCCcccCCcchHHHHHHHHHHHHHHHHHHHHHh
Q 014462 341 IASGIYDYYAEKQAGLLWKYNGNMLPVSFRDQETPTCLGSICYSITCGIMAGLCIIAMVMSLIVV 405 (424)
Q Consensus 341 l~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~g~~c~~~~f~i~a~~~~~~~~l~~~l~ 405 (424)
+.|.++|..+ ++.+|.+.+.+.+++.+......
T Consensus 348 ~~G~~~~~~g--------------------------------~~~~~~~~~~~~~~~~~~~~~~~ 380 (390)
T PRK03545 348 LGNQVSLHLG--------------------------------LSSIGYVGAALALAALVWSILIF 380 (390)
T ss_pred HHHHHHhccC--------------------------------hhHHHHHHHHHHHHHHHHHHHHc
Confidence 9999999887 89999999998888887765544
No 67
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=99.38 E-value=1.3e-11 Score=124.35 Aligned_cols=156 Identities=10% Similarity=0.024 Sum_probs=120.3
Q ss_pred HHHHhcHHHHHHHcCCCchhH--HHHHHHHHhhhhhhhhhhhhhhhhhcccCchhHHHHHHHHHHHHHHHHHHh-chhHH
Q 014462 211 LTVIDNLGQICQSLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVMAFALLYYAI-GWPGE 287 (424)
Q Consensus 211 ~~~~~~l~~i~~~~g~s~~~~--~~sl~si~~~~gr~~~G~lsd~~g~k~~~~r~~~l~~~~~~~~~~~ll~~~-~~~~~ 287 (424)
..+..-+|++.+++|.+..+. +.+.+.++..++.+..|+++||+|||+.. .........+.+.... .+...
T Consensus 8 ~~~~~~lp~i~~~~~~s~~~~g~~~s~~~~g~~i~~~~~G~l~Dr~grr~~~------~~~~~~~~~~~~~~~~~~~~~~ 81 (368)
T TIGR00903 8 VTFSPVLSLVAEDIDVSKEELGLLAITYPAAFLALTIPSGLLLDRAFKRWFL------FGSLATFAAAAGRLLDPFNYEW 81 (368)
T ss_pred HHHHhhHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHHH------HHHHHHHHHHHHHHHHhccHHH
Confidence 445567889999999998765 88888999999999999999999977533 2222222222222222 46678
Q ss_pred HHHHHHHHHHHhhhhHhHHHHHHHHhhCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhccCCCCCc
Q 014462 288 IYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIASGIYDYYAEKQAGLLWKYNGNMLPV 367 (424)
Q Consensus 288 l~~~~~l~G~~~G~~~~~~~~~~se~fg~~~~g~~~g~~~~~~~lgs~l~~~~l~g~l~d~~~~~~~~~~~~~~~~~~~~ 367 (424)
+++..++.|++.|.. ......++|.+|+|+|+++.++...+.++|..+ ++.+.+.+.+..+
T Consensus 82 l~~~R~l~G~g~~~~-~~~~~~~~~~~~~~~r~~a~~~~~~~~~lG~~l-~~~~~~~l~~~~g----------------- 142 (368)
T TIGR00903 82 LLACQLLAALGQPFL-LNAFAPAASQIREERRDLVISLLSFAMYLGIIF-ALAAGLKIYTAGG----------------- 142 (368)
T ss_pred HHHHHHHHHhHhHHH-HHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHccc-----------------
Confidence 899999999999864 455566699999999999999999999999997 8988888877655
Q ss_pred ccCCCCCCcccCCcchHHHHHHHHHHHHHHHHHHHHHhh
Q 014462 368 SFRDQETPTCLGSICYSITCGIMAGLCIIAMVMSLIVVH 406 (424)
Q Consensus 368 ~~~~~~~~~c~g~~c~~~~f~i~a~~~~~~~~l~~~l~~ 406 (424)
||+.|++.++++++..++..+..+
T Consensus 143 ---------------Wr~~f~~~~~l~~~~~~~~~~~lp 166 (368)
T TIGR00903 143 ---------------LQLLIIPIAAVAAAGIILVLAALP 166 (368)
T ss_pred ---------------hHHHHHHHHHHHHHHHHHHHHHcC
Confidence 999999999988877666555443
No 68
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=99.38 E-value=2.6e-11 Score=123.31 Aligned_cols=168 Identities=17% Similarity=0.211 Sum_probs=132.6
Q ss_pred HHHHHHHHHhhhhHHHHHhcHHHHH-HHcCCCchhH--HHHHHHHHhhhhhhhhhhhhhhhhhcccCchhHHHHHHHHHH
Q 014462 197 LLLFFSLVLASGSGLTVIDNLGQIC-QSLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVM 273 (424)
Q Consensus 197 wll~~~~~~~~~~~~~~~~~l~~i~-~~~g~s~~~~--~~sl~si~~~~gr~~~G~lsd~~g~k~~~~r~~~l~~~~~~~ 273 (424)
|.+++..++...+...+...++.++ +++|.+.... ..+...+...+.++.+|+++||++||+.+ ..+.++.
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~gl~~~~~~l~~~~~~~~~G~l~dr~g~k~~l------~~~~~~~ 86 (400)
T PRK11646 13 YFLLIDNMLVVLGFFVVFPLISIRFVDQLGWAAVMVGIALGLRQFIQQGLGIFGGAIADRFGAKPMI------VTGMLMR 86 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHhhhhHHHHHhCchHHH------HHHHHHH
Confidence 5555666666666666666666655 5689987765 77777888888899999999999988654 5566666
Q ss_pred HHHHHHHH-hchhHHHHHHHHHHHHHhhhhHhHHHHHHHHhhCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhh
Q 014462 274 AFALLYYA-IGWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIASGIYDYYAEK 352 (424)
Q Consensus 274 ~~~~ll~~-~~~~~~l~~~~~l~G~~~G~~~~~~~~~~se~fg~~~~g~~~g~~~~~~~lgs~l~~~~l~g~l~d~~~~~ 352 (424)
+++.+.+. ..+.+.+++..++.|++.|..++...+.+.+.+|++++++++++......+|..+ ||.++|.+. ..+
T Consensus 87 ~~~~~~~~~~~~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~g~~i-g~~l~g~l~-~~g-- 162 (400)
T PRK11646 87 AAGFATMAIAHEPWLLWLSCILSGLGGTLFDPPRTALVIKLIRPHQRGRFFSLLMMQDSAGAVI-GALLGSWLL-QYD-- 162 (400)
T ss_pred HHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHH-Hhh--
Confidence 66665554 3456678888899999988888888999999999999999999999999999997 999999887 444
Q ss_pred hhhhhhhccCCCCCcccCCCCCCcccCCcchHHHHHHHHHHHHHHHHHHHHH
Q 014462 353 QAGLLWKYNGNMLPVSFRDQETPTCLGSICYSITCGIMAGLCIIAMVMSLIV 404 (424)
Q Consensus 353 ~~~~~~~~~~~~~~~~~~~~~~~~c~g~~c~~~~f~i~a~~~~~~~~l~~~l 404 (424)
|++.|++.+.++++..++..+.
T Consensus 163 ------------------------------~~~~f~~~~~~~~~~~i~~~~~ 184 (400)
T PRK11646 163 ------------------------------FRLVCATGAVLFVLAAAFNAWL 184 (400)
T ss_pred ------------------------------HHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999988877766554443
No 69
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=99.38 E-value=8.4e-12 Score=129.93 Aligned_cols=184 Identities=14% Similarity=0.203 Sum_probs=126.5
Q ss_pred HHHhhhhHHHHHHHHHHHHhhhhHHHHHhcHHHHHHH-cCCCchhH--HHHHHHHHhhhhhhhhhhhhhhhhhcccCc-h
Q 014462 187 LPQALMKADFLLLFFSLVLASGSGLTVIDNLGQICQS-LGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYP-R 262 (424)
Q Consensus 187 ~~~~l~~~~fwll~~~~~~~~~~~~~~~~~l~~i~~~-~g~s~~~~--~~sl~si~~~~gr~~~G~lsd~~g~k~~~~-r 262 (424)
+++.++++++|.+++.+++..+....+.+++|.++.+ +|++..++ +.++..+++.+|++++|+++||+++|+... |
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~~~r~~~~~r 324 (476)
T PLN00028 245 LRYGVTNYRTWILALTYGYSFGVELTMDNIIAEYFYDRFGLSLETAGAIAASFGLMNLFARPAGGYLSDVAARRFGMRGR 324 (476)
T ss_pred HHHHHcCchhHHHHHHHHHHHHHHHHHHhHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHhcCcchh
Confidence 4567888999998888777767677777888988755 79987654 788899999999999999999999875432 3
Q ss_pred hHHHHHHHHHHHHHHHHHH-hchhHHHHHHHHHHHHHhhhhHhHHHHHHHHhhCcchhhHHHHHHHHHHHHHHHHHHHHH
Q 014462 263 PVAMAVAQVVMAFALLYYA-IGWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVI 341 (424)
Q Consensus 263 ~~~l~~~~~~~~~~~ll~~-~~~~~~l~~~~~l~G~~~G~~~~~~~~~~se~fg~~~~g~~~g~~~~~~~lgs~l~~~~l 341 (424)
...+.+..++.++..+++. ..+.....+..++.+++.+...+...+++.++. ++++|+++|+.+.+..+|+.+ ++.
T Consensus 325 ~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~-~~~~g~~~g~~~~~g~lg~~i-~~~- 401 (476)
T PLN00028 325 LWALWIVQTLGGVFCIWLGRANSLGAAIVVMILFSIFVQAACGATFGIVPFVS-RRSLGVISGLTGAGGNVGAVL-TQL- 401 (476)
T ss_pred HHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHhhhhhcccCcccC-hhhchhhhhhhhccccHHHHH-HHH-
Confidence 3344444444444333333 223333444555666666555555556666655 578999999987776666655 444
Q ss_pred HHHHHhhhhhhhhhhhhhccCCCCCcccCCCCCCcccCCcchHHHHHHHHHHHHHHHHHHHHHh
Q 014462 342 ASGIYDYYAEKQAGLLWKYNGNMLPVSFRDQETPTCLGSICYSITCGIMAGLCIIAMVMSLIVV 405 (424)
Q Consensus 342 ~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~g~~c~~~~f~i~a~~~~~~~~l~~~l~ 405 (424)
+++..+. ..|+.+|++.+++.+++.++.++++
T Consensus 402 ---l~~~~~~-----------------------------~~y~~~f~~~~~~~~i~~~~~~~~~ 433 (476)
T PLN00028 402 ---LFFTGSS-----------------------------YSTETGISLMGVMIIACTLPVAFIH 433 (476)
T ss_pred ---HHHhcCC-----------------------------ccHhhHHHHHHHHHHHHHHHHHhee
Confidence 4442220 0299999999999999888887765
No 70
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=99.38 E-value=2.1e-11 Score=123.69 Aligned_cols=147 Identities=14% Similarity=0.112 Sum_probs=116.2
Q ss_pred hHHHHHHHHHHHHhhhhHHHHHhcHHHHHHHcCCCchh--HHHHHHHHHhhhhhhhhhhhhhhhhhcccCchhHHHHHHH
Q 014462 193 KADFLLLFFSLVLASGSGLTVIDNLGQICQSLGYADTS--IYVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQ 270 (424)
Q Consensus 193 ~~~fwll~~~~~~~~~~~~~~~~~l~~i~~~~g~s~~~--~~~sl~si~~~~gr~~~G~lsd~~g~k~~~~r~~~l~~~~ 270 (424)
+++||.++++.++.......+...++.+.+++|.++.. +..+.+.+...++.+.+|+++||++||+.+ ..+.
T Consensus 2 ~~~f~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~l~~~l~~~~~G~laDr~grr~vl------~~~~ 75 (393)
T PRK11195 2 SKGFYAIMAAQFFSALADNALLFAAIALLKELHYPDWSQPLLQMFFVLAYIVLAPFVGAFADSFPKGRVM------FIAN 75 (393)
T ss_pred CCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHhhhhHhhhccCCchhh------HHHH
Confidence 45788888888877665555556666777888887654 378888899999999999999999999866 4445
Q ss_pred HHHHHHHHHHHhchhHHHHHHHHHHHHHhhhhHhHHHHHHHHhhCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 014462 271 VVMAFALLYYAIGWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIASGIYDY 348 (424)
Q Consensus 271 ~~~~~~~ll~~~~~~~~l~~~~~l~G~~~G~~~~~~~~~~se~fg~~~~g~~~g~~~~~~~lgs~l~~~~l~g~l~d~ 348 (424)
++.+++.+.+..... .++..++.|++.+...+...++++|++|+++++++.++..+...+|..+ ||.++|.+++.
T Consensus 76 ~~~~~~~~~~~~~~~--~~~~r~l~G~~~a~~~pa~~a~i~~~~~~~~~~~a~~~~~~~~~~~~~~-Gp~lgG~l~~~ 150 (393)
T PRK11195 76 GIKLLGCLLMLFGIH--PLLAYGLVGIGAAAYSPAKYGILTELLPGEKLVKANGWMEGSTIAAILL-GTVLGGALADP 150 (393)
T ss_pred HHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHH
Confidence 444444443322211 2566788999999999999999999999999999999999999999987 99999999873
No 71
>PRK12307 putative sialic acid transporter; Provisional
Probab=99.38 E-value=3.4e-11 Score=122.73 Aligned_cols=148 Identities=14% Similarity=0.104 Sum_probs=117.1
Q ss_pred HHHHHHHHHHhhhhHHHHHhcHHHHHHHcCCCchhH--HHHHHHHHhhhhhhhhhhhhhhhhhcccCchhHHHHHHHHHH
Q 014462 196 FLLLFFSLVLASGSGLTVIDNLGQICQSLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVM 273 (424)
Q Consensus 196 fwll~~~~~~~~~~~~~~~~~l~~i~~~~g~s~~~~--~~sl~si~~~~gr~~~G~lsd~~g~k~~~~r~~~l~~~~~~~ 273 (424)
+...++.+++...........+|.+.+++|.++.+. ..++..++..++.+.+|+++||+|||+.+ .++.++.
T Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~~~~~~~~~~~l~~~~~g~l~dr~g~r~~l------~~~~~~~ 93 (426)
T PRK12307 20 LFSAWLGYVFDGFDFMLIFYIMYLIKADLGLTDMEGAFLATAAFIGRPFGGALFGLLADKFGRKPLM------MWSIVAY 93 (426)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHH------HHHHHHH
Confidence 344444444444444445556777888899987654 78889999999999999999999998755 5666666
Q ss_pred HHHHHHHH-hchhHHHHHHHHHHHHHhhhhHhHHHHHHHHhhCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh
Q 014462 274 AFALLYYA-IGWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIASGIYDYYA 350 (424)
Q Consensus 274 ~~~~ll~~-~~~~~~l~~~~~l~G~~~G~~~~~~~~~~se~fg~~~~g~~~g~~~~~~~lgs~l~~~~l~g~l~d~~~ 350 (424)
+++.++.. ..+.+.+++..++.|++.|..++....++.|.+++++|+++.++...+..+|..+ ++.+.+.+.+..+
T Consensus 94 ~~~~~~~~~~~~~~~l~~~r~l~G~g~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~-~~~l~~~l~~~~~ 170 (426)
T PRK12307 94 SVGTGLSGLASGVIMLTLSRFIVGMGMAGEYACASTYAVESWPKHLKSKASAFLVSGFGIGNII-AAYFMPSFAEAYG 170 (426)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCHhHhhHhhhHHHHHHhHHHHH-HHHHHHHHcccCC
Confidence 66665554 3456678889999999999999999999999999999999999999999999987 7888888776655
No 72
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=99.38 E-value=3.4e-11 Score=119.26 Aligned_cols=160 Identities=15% Similarity=0.197 Sum_probs=116.9
Q ss_pred HHHhhhhHHHHHHHHHHHHhhhhHHHHHhcHHHHHHH-cCCCchhH--HHHHHHHHhhhhhhhhhhhhhhhhhcccCchh
Q 014462 187 LPQALMKADFLLLFFSLVLASGSGLTVIDNLGQICQS-LGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRP 263 (424)
Q Consensus 187 ~~~~l~~~~fwll~~~~~~~~~~~~~~~~~l~~i~~~-~g~s~~~~--~~sl~si~~~~gr~~~G~lsd~~g~k~~~~r~ 263 (424)
.++.++++.+|.+.+..++.......+..++|.+.++ +|++..+. ..+...+++.+|+++.|++.||..+++...
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~-- 286 (379)
T TIGR00881 209 LQYVLLNKVLWYISLGYVFVYVVRTGILDWSPLYLTQEKGFSKEKASWAFTLYELGGLVGTLLAGWLSDKLFNGRRGP-- 286 (379)
T ss_pred HHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHcchhHHHHHHHHHHHcCCcchH--
Confidence 4557889999998888887777777777888888765 78886544 778888999999999999999876544331
Q ss_pred HHHHHHHHHHHHHHHHHHh---chhHHHHHHHHHHHHHhhhhHhHHHHHHHHhhCcchhhHHHHHHHHHHHHHHHHHHHH
Q 014462 264 VAMAVAQVVMAFALLYYAI---GWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGV 340 (424)
Q Consensus 264 ~~l~~~~~~~~~~~ll~~~---~~~~~l~~~~~l~G~~~G~~~~~~~~~~se~fg~~~~g~~~g~~~~~~~lgs~l~~~~ 340 (424)
..........++...+.. .+.....+..++.|++.++........+.|.+|++++|+..++.++...+|+.+ +|.
T Consensus 287 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~-~~~ 364 (379)
T TIGR00881 287 -LAVFFMALIIVSLLVYWLNPAANPLMDLICLFALGFLVYGPQMLIGVIASELAPKKAAGTAAGFVGFFAYLGGIL-AGL 364 (379)
T ss_pred -HHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHHHHHhhhhHHHHHHHHHhcCcchhHHHHHHHHHhhhhhhhh-hhh
Confidence 111111222222222221 223344455666776666666677788999999999999999999999999997 999
Q ss_pred HHHHHHhhhh
Q 014462 341 IASGIYDYYA 350 (424)
Q Consensus 341 l~g~l~d~~~ 350 (424)
+.|.+.|..|
T Consensus 365 ~~g~l~~~~g 374 (379)
T TIGR00881 365 PLGYLADGFG 374 (379)
T ss_pred hHHHHHHhhc
Confidence 9999999876
No 73
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=99.38 E-value=2.3e-10 Score=115.55 Aligned_cols=175 Identities=14% Similarity=0.081 Sum_probs=124.9
Q ss_pred HHHhhhhHHHHHHHHHHHHhhhhHHHHHhcHHHHHHHcCCCchhH--HHHHHH-HHhhhhhhhhhhhhhhhhhcccCchh
Q 014462 187 LPQALMKADFLLLFFSLVLASGSGLTVIDNLGQICQSLGYADTSI--YVSMIS-IWNFLGRVGGGYFSEAIVRKFAYPRP 263 (424)
Q Consensus 187 ~~~~l~~~~fwll~~~~~~~~~~~~~~~~~l~~i~~~~g~s~~~~--~~sl~s-i~~~~gr~~~G~lsd~~g~k~~~~r~ 263 (424)
+++.+|++.+|......++............+.+.++.|++..+. +..... +...+|.+.+|++.||+++|+..
T Consensus 201 ~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~G~s~~~ig~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l--- 277 (390)
T TIGR02718 201 LFRFFRRPLAWSLLALALLSAMTAVSGFGLSKLYLVDAGWPLEWIGRLGMAGGAVTVLLGCGGGAWLVRRAGLWRTF--- 277 (390)
T ss_pred HHHHHcCcCHHHHHHHHHHHHHHHHHHHHHhhHHHHhcCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhHHHHH---
Confidence 445778888887777766666655556667788888899998765 444444 46678899999999999987644
Q ss_pred HHHHHHHHHHHHHH-HHHHh------chhHHHHHHHHHHHHHhhhhHhHHHHHHHHhhCc-chhhHHHHHHHHHHHHHHH
Q 014462 264 VAMAVAQVVMAFAL-LYYAI------GWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGL-KSFGALYNFLTLASPAGSL 335 (424)
Q Consensus 264 ~~l~~~~~~~~~~~-ll~~~------~~~~~l~~~~~l~G~~~G~~~~~~~~~~se~fg~-~~~g~~~g~~~~~~~lgs~ 335 (424)
..+.++.+... ..+.. .....++...++.+++.|...+...+.+.+..++ +++|+.+++.+....+|+.
T Consensus 278 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lg~~ 354 (390)
T TIGR02718 278 ---ILGVGLAGSLALLWFAQAAFWLAPGIAVAWSCSAFGSLITGITSVAIYTAFMRFAGDGDQAGTDVTAVQSTRDLGEL 354 (390)
T ss_pred ---HHHHHHHHHHHHHHHHHHHcccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcccchHHHHHHHHHHHHHHHH
Confidence 22222221111 11111 1122334444555677888888888888888876 7899999999999999999
Q ss_pred HHHHHHHHHHHhhhhhhhhhhhhhccCCCCCcccCCCCCCcccCCcchHHHHHHHHHHHHHHHHH
Q 014462 336 IFSGVIASGIYDYYAEKQAGLLWKYNGNMLPVSFRDQETPTCLGSICYSITCGIMAGLCIIAMVM 400 (424)
Q Consensus 336 l~~~~l~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~g~~c~~~~f~i~a~~~~~~~~l 400 (424)
+ +|.+.|.++|..| |+..|.+.+++.+++.++
T Consensus 355 ~-g~~~~G~l~~~~G--------------------------------~~~~f~~~~~~~l~a~~~ 386 (390)
T TIGR02718 355 I-ASSIAGYLTDRFG--------------------------------YAGGFLSGTVLAVLAILL 386 (390)
T ss_pred H-HHHHHHHHHHHHc--------------------------------cHHHHHHHHHHHHHHHHH
Confidence 8 9999999999877 889999888877776544
No 74
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=99.37 E-value=1.6e-11 Score=126.42 Aligned_cols=186 Identities=13% Similarity=0.098 Sum_probs=135.0
Q ss_pred CCHHHhhhhHHHHHHHHHHHHhhhhHHHHHhcHHHHHHHcCCCchhH--HHHHHHHHhhhhhhhhhhhhhhhhhcccCch
Q 014462 185 FTLPQALMKADFLLLFFSLVLASGSGLTVIDNLGQICQSLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPR 262 (424)
Q Consensus 185 ~t~~~~l~~~~fwll~~~~~~~~~~~~~~~~~l~~i~~~~g~s~~~~--~~sl~si~~~~gr~~~G~lsd~~g~k~~~~r 262 (424)
.+.++.+|+++.|++.+.+++..+...++..++|++.++ .++.... ...+..+...++|+++|+++||+|+++.+
T Consensus 243 ~~~~~vlk~~~~Wllslly~~tFG~fvg~s~~lp~~~~~-~~~~~~~l~~~~l~~l~~~l~rplgG~LADRiG~~~vl-- 319 (462)
T PRK15034 243 ADQLPVLQRLHLWLLSLLYLATFGSFIGFSAGFAMLAKT-QFPDVNILRLAFFGPFIGAIARSVGGAISDKFGGVRVT-- 319 (462)
T ss_pred HHHHHHhCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHH-HcChHHHHHHHHHHHHHHHHHHHhhHHHHHhcCchHHH--
Confidence 346679999999999999999999998898899999876 3443332 45566788999999999999999988654
Q ss_pred hHHHHHHHHHHHHHHH---HHHh----chhHHHHHHHHHHHHHhhhhHhHHHHHHHHhhCc-------------------
Q 014462 263 PVAMAVAQVVMAFALL---YYAI----GWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGL------------------- 316 (424)
Q Consensus 263 ~~~l~~~~~~~~~~~l---l~~~----~~~~~l~~~~~l~G~~~G~~~~~~~~~~se~fg~------------------- 316 (424)
.++.+.+.+... +... .+.....+..+...++.|.....+.-.+.++|+.
T Consensus 320 ----~~~~i~~~i~~~~~~l~lp~~~~~~~~~~~~~~~~l~~~~G~gngsvfk~ip~~f~~~~~~~~~~~~~~~~~~~~~ 395 (462)
T PRK15034 320 ----LINFIFMAIFSALLFLTLPGTGSGNFIAFYAVFMGLFLTAGLGSGSTFQMIAVIFRQITIYRVKMKGGSDEQAQRE 395 (462)
T ss_pred ----HHHHHHHHHHHHHHHHHhccccccHHHHHHHHHHHHHHHhcccchHHHHhhHHHHhhhhhhcccccccchhHHhhH
Confidence 222332222221 1111 1122333333344455666666666677777763
Q ss_pred --chhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhccCCCCCcccCCCCCCcccCCcchHHHHHHHHHHH
Q 014462 317 --KSFGALYNFLTLASPAGSLIFSGVIASGIYDYYAEKQAGLLWKYNGNMLPVSFRDQETPTCLGSICYSITCGIMAGLC 394 (424)
Q Consensus 317 --~~~g~~~g~~~~~~~lgs~l~~~~l~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~g~~c~~~~f~i~a~~~ 394 (424)
++.|...|+......+|+++ -|.+.|..++..+ .|...|++..+..
T Consensus 396 ~~~~~g~v~G~v~a~G~~Ggf~-~p~~~g~~~~~~g-------------------------------~~~~~~~~~~~~~ 443 (462)
T PRK15034 396 AVTETAAALGFISAIGAVGGFF-IPQAFGMSLNMTG-------------------------------SPVGAMKVFLIFY 443 (462)
T ss_pred HHHHHHHHHHHHHHHHHcccch-hhHHHHHHHHHcC-------------------------------CcHHHHHHHHHHH
Confidence 26899999999999999998 5999999998877 2889999999999
Q ss_pred HHHHHHHHHHhhhhh
Q 014462 395 IIAMVMSLIVVHRTK 409 (424)
Q Consensus 395 ~~~~~l~~~l~~~~~ 409 (424)
+++.++.++...|+.
T Consensus 444 ~~~~~~~w~~y~r~~ 458 (462)
T PRK15034 444 IVCVLLTWLVYGRRK 458 (462)
T ss_pred HHHHHHHHHHhccCC
Confidence 999888888776653
No 75
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.37 E-value=3.6e-11 Score=121.48 Aligned_cols=174 Identities=15% Similarity=0.163 Sum_probs=132.3
Q ss_pred hHHHHHHHHHHHHhhhhHHHHHhcHHHHHHHcCCCchh-------HHHHHHHHHhhhhhhhhhhhhhhhhhcccCchhHH
Q 014462 193 KADFLLLFFSLVLASGSGLTVIDNLGQICQSLGYADTS-------IYVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVA 265 (424)
Q Consensus 193 ~~~fwll~~~~~~~~~~~~~~~~~l~~i~~~~g~s~~~-------~~~sl~si~~~~gr~~~G~lsd~~g~k~~~~r~~~ 265 (424)
++.+..+++..++.......+...+|.+.+++|.+..+ ...++..+...++.+..|+++||++||+.+
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~----- 87 (408)
T PRK09874 13 KRNLTVAWLGCFLTGAAFSLVMPFLPLYVEQLGVTGHSALNMWSGLVFSITFLFSAIASPFWGGLADRKGRKIML----- 87 (408)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHhCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhCcHHHH-----
Confidence 44566666666665555555666789999999887532 267788889999999999999999988654
Q ss_pred HHHHHHHHHHHHHHHH-hchhHHHHHHHHHHHHHhhhhHhHHHHHHHHhhCcchhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 014462 266 MAVAQVVMAFALLYYA-IGWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIASG 344 (424)
Q Consensus 266 l~~~~~~~~~~~ll~~-~~~~~~l~~~~~l~G~~~G~~~~~~~~~~se~fg~~~~g~~~g~~~~~~~lgs~l~~~~l~g~ 344 (424)
..+.++.+++.+++. ..+.+.+++..++.|++.+ ..+.....+.+.++.++++++.++......+|..+ +|.+.|.
T Consensus 88 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~~~~~~~ 164 (408)
T PRK09874 88 -LRSALGMGIVMVLMGLAQNIWQFLILRALLGLLGG-FVPNANALIATQVPRNKSGWALGTLSTGGVSGALL-GPLAGGL 164 (408)
T ss_pred -HHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhhh-hHHhHHHHHHHhcCHhhhhHHHHHHHHHHHHHHHH-HHHHHHH
Confidence 445555555555444 3456677788888898755 45667788899999999999999999999999987 8999999
Q ss_pred HHhhhhhhhhhhhhhccCCCCCcccCCCCCCcccCCcchHHHHHHHHHHHHHHHHHHHHHhh
Q 014462 345 IYDYYAEKQAGLLWKYNGNMLPVSFRDQETPTCLGSICYSITCGIMAGLCIIAMVMSLIVVH 406 (424)
Q Consensus 345 l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~g~~c~~~~f~i~a~~~~~~~~l~~~l~~ 406 (424)
+.+..+ |+.+|++.+++.+++.+...++.+
T Consensus 165 l~~~~~--------------------------------~~~~~~~~~~~~~~~~~~~~~~~~ 194 (408)
T PRK09874 165 LADSYG--------------------------------LRPVFFITASVLFLCFLVTLFCIR 194 (408)
T ss_pred HHHHhC--------------------------------HHHHHHHHHHHHHHHHHHHHHHhc
Confidence 888666 999999999888877666655443
No 76
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.37 E-value=1.5e-11 Score=125.40 Aligned_cols=175 Identities=15% Similarity=0.077 Sum_probs=132.4
Q ss_pred hhhhHHHHHHHHHHHHhhhhHHHHHhcHHHHHHHcCCCchhH--HHHHHHHHhhhhhhhhhhhhhhhhhcccCchhHHHH
Q 014462 190 ALMKADFLLLFFSLVLASGSGLTVIDNLGQICQSLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMA 267 (424)
Q Consensus 190 ~l~~~~fwll~~~~~~~~~~~~~~~~~l~~i~~~~g~s~~~~--~~sl~si~~~~gr~~~G~lsd~~g~k~~~~r~~~l~ 267 (424)
..++++++.+++..++...........+|.+.++.+.+..+. ..+...++..++.+..|+++||++||+.+ .
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~l~~~~~~~~~G~l~dr~g~~~~l------~ 86 (417)
T PRK10489 13 LKTHPAFRAVFIARFISIFGLGLLGVAVPVQIQMMTGSTLQVGLSVTLTGGAMFIGLMVGGVLADRYDRKKLI------L 86 (417)
T ss_pred HHhCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHhhHHHhhhcCCceEE------E
Confidence 445777777777666655554455556788888887776544 88889999999999999999999999866 2
Q ss_pred HHHHHHHHHHHHH-----H-hchhHHHHHHHHHHHHHhhhhHhHHHHHHHHhhCcchhhHHHHHHHHHHHHHHHHHHHHH
Q 014462 268 VAQVVMAFALLYY-----A-IGWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVI 341 (424)
Q Consensus 268 ~~~~~~~~~~ll~-----~-~~~~~~l~~~~~l~G~~~G~~~~~~~~~~se~fg~~~~g~~~g~~~~~~~lgs~l~~~~l 341 (424)
.+.++.+++.+.+ . ..+.+.+++..++.|++.|...+...+.+.+.++.++++++.++.++...+|..+ ||.+
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-g~~l 165 (417)
T PRK10489 87 LARGTCGLGFIGLALNAFLPEPSLLAIYLLGLWDGFFGSLGVTALLAATPALVGRENLMQAGAITMLTVRLGSVI-SPAL 165 (417)
T ss_pred ehHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHhhhhhhccCHHHHHHHHHHHHHHHhHHHHh-HHHH
Confidence 2333333322221 1 2334566778888899988888888899999999999999999999999999997 9999
Q ss_pred HHHHHhhhhhhhhhhhhhccCCCCCcccCCCCCCcccCCcchHHHHHHHHHHHHHHHHHHHH
Q 014462 342 ASGIYDYYAEKQAGLLWKYNGNMLPVSFRDQETPTCLGSICYSITCGIMAGLCIIAMVMSLI 403 (424)
Q Consensus 342 ~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~g~~c~~~~f~i~a~~~~~~~~l~~~ 403 (424)
+|.+++..+ |++.|++.+...+++.++.+.
T Consensus 166 ~g~l~~~~~--------------------------------~~~~~~~~~~~~~~~~~~~~~ 195 (417)
T PRK10489 166 GGLLIAAGG--------------------------------VAWNYGLAAAGTFITLLPLLR 195 (417)
T ss_pred HHHHHHHHh--------------------------------hHHHHHHHHHHHHHHHHHHHh
Confidence 999998766 888888887777666555443
No 77
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.37 E-value=1.8e-10 Score=117.38 Aligned_cols=182 Identities=10% Similarity=0.030 Sum_probs=130.5
Q ss_pred HhhhhHHHHHHHHHHHHhhhhHHHHHhcHHHHHHH-cCCCchhH--HHHHHHHHhhhhhhhhhhhhhhhhhcccCchhHH
Q 014462 189 QALMKADFLLLFFSLVLASGSGLTVIDNLGQICQS-LGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVA 265 (424)
Q Consensus 189 ~~l~~~~fwll~~~~~~~~~~~~~~~~~l~~i~~~-~g~s~~~~--~~sl~si~~~~gr~~~G~lsd~~g~k~~~~r~~~ 265 (424)
..++++.++..++..++... ...+..++|.+.++ +|++.... +.+..+++..+|+++.|++.||.++++.+
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~~~l~~~~~~~~~l----- 292 (417)
T PRK10489 219 FLLASPVVGGIALLGGLLTM-ASAVRVLYPALADEVWQMGAAQIGLLYAAVPLGAALGALTSGWLAHSARPGLLM----- 292 (417)
T ss_pred HHHcChHHHHHHHHHHHHHH-HHhHHHhhHHHHHhccCCChhHhHHHHHHHHHHHHHHHHHHHHhhhccCcchHH-----
Confidence 36677777665554444322 23455678888887 88886543 67788899999999999999875443322
Q ss_pred HHHHHHHHHHHHHHHHh-chhHHHHHHHHHHHHHhhhhHhHHHHHHHHhhCcchhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 014462 266 MAVAQVVMAFALLYYAI-GWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIASG 344 (424)
Q Consensus 266 l~~~~~~~~~~~ll~~~-~~~~~l~~~~~l~G~~~G~~~~~~~~~~se~fg~~~~g~~~g~~~~~~~lgs~l~~~~l~g~ 344 (424)
..+.++++++.+++.. .+...+.+..++.|++.+...+...+++.+.+|.+.+|+.+++.++...+|+.+ |+.+.|.
T Consensus 293 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~-g~~l~G~ 370 (417)
T PRK10489 293 -LLSTLGSFLAVGLFGLMPMWILAVLCLALFGYLSAISSLLQYTLLQTQTPDEMLGRINGLWTAQNVTGDAI-GAALLGG 370 (417)
T ss_pred -HHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHhhhHhH-HHHHHHH
Confidence 3444455555554443 334455667778888888877778889999999999999999999999999997 9999999
Q ss_pred HHhhhhhhhhhhhhhccCCCCCcccCCCCCCcccCCcchHHHHHHHHHHHHHHHHHHHHHhhhhhH
Q 014462 345 IYDYYAEKQAGLLWKYNGNMLPVSFRDQETPTCLGSICYSITCGIMAGLCIIAMVMSLIVVHRTKS 410 (424)
Q Consensus 345 l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~g~~c~~~~f~i~a~~~~~~~~l~~~l~~~~~~ 410 (424)
+.|..+ ++.++++.+++.++..++......++|+
T Consensus 371 l~~~~g--------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 404 (417)
T PRK10489 371 LGAMMT--------------------------------PVASASASGFGLLIIGVLLLLVLGELRR 404 (417)
T ss_pred HHHHhc--------------------------------hhhHHHHHHHHHHHHHHHHHHhcccccc
Confidence 999877 6777877777666655555554455444
No 78
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=99.37 E-value=3.6e-11 Score=124.22 Aligned_cols=171 Identities=13% Similarity=0.168 Sum_probs=121.4
Q ss_pred HHHHHHHHHhhhhHHH----HHhcHHHHHHHcCCCchhH--HHHHHHHHhhhhhhhhhhhhhhhhhcccCchhHHHHHHH
Q 014462 197 LLLFFSLVLASGSGLT----VIDNLGQICQSLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQ 270 (424)
Q Consensus 197 wll~~~~~~~~~~~~~----~~~~l~~i~~~~g~s~~~~--~~sl~si~~~~gr~~~G~lsd~~g~k~~~~r~~~l~~~~ 270 (424)
|.++...++....... +...+|.+.++ |.+..+. ..+...++..++.+.+|+++||+|+|+.+ .++.
T Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~-g~s~~~~g~~~~~~~i~~~~~~~~~G~l~Dr~g~k~~l------~~~~ 100 (452)
T PRK11273 28 WQIFLGIFFGYAAYYLVRKNFALAMPYLVEQ-GFSRGDLGFALSGISIAYGFSKFIMGSVSDRSNPRVFL------PAGL 100 (452)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhHHHHHc-CCCHHHHHHHHHHHHHHHHHHHhhhhhhhhccCCchhH------HHHH
Confidence 5554444444333222 23456766666 8887654 88899999999999999999999998754 5555
Q ss_pred HHHHHHHHHHHh-----chhHHHHHHHHHHHHHhhhhHhHHHHHHHHhhCcchhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 014462 271 VVMAFALLYYAI-----GWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIASGI 345 (424)
Q Consensus 271 ~~~~~~~ll~~~-----~~~~~l~~~~~l~G~~~G~~~~~~~~~~se~fg~~~~g~~~g~~~~~~~lgs~l~~~~l~g~l 345 (424)
++.+++.++++. .+...+++..++.|++.|..++.....+.++++++++|++.++.+.+..+|+.+.+|.+...+
T Consensus 101 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~l~gi~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~ 180 (452)
T PRK11273 101 ILAAAVMLFMGFVPWATSSIAVMFVLLFLCGWFQGMGWPPCGRTMVHWWSQKERGGIVSVWNCAHNVGGGLPPLLFLLGM 180 (452)
T ss_pred HHHHHHHHHHHhhhcccccHHHHHHHHHHHHHHHhccchHHHHHHHHhCChHHHHHHHHHHHHHHHhhhhHHHHHHHHHH
Confidence 555555554432 134456777889999999888888888999999999999999999999998765455433333
Q ss_pred HhhhhhhhhhhhhhccCCCCCcccCCCCCCcccCCcchHHHHHHHHHHHHHHHHHHHHHhh
Q 014462 346 YDYYAEKQAGLLWKYNGNMLPVSFRDQETPTCLGSICYSITCGIMAGLCIIAMVMSLIVVH 406 (424)
Q Consensus 346 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~g~~c~~~~f~i~a~~~~~~~~l~~~l~~ 406 (424)
....+ |++.|++.++++++..++.+++.+
T Consensus 181 ~~~~g--------------------------------w~~~f~i~~~~~~~~~~l~~~~~~ 209 (452)
T PRK11273 181 AWFND--------------------------------WHAALYMPAFAAILVALFAFAMMR 209 (452)
T ss_pred HHhcc--------------------------------HHHHHHHHHHHHHHHHHHHHHHcc
Confidence 22222 999999999888776666555543
No 79
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=99.37 E-value=1.8e-11 Score=127.85 Aligned_cols=150 Identities=18% Similarity=0.255 Sum_probs=121.5
Q ss_pred HHHHHHHHHHHHhhhhHHHHHhcHHHHHH-HcCCCchhH--HHHHHHHHhhhhhhhhhhhhhh-hhhcccCchhHHHHHH
Q 014462 194 ADFLLLFFSLVLASGSGLTVIDNLGQICQ-SLGYADTSI--YVSMISIWNFLGRVGGGYFSEA-IVRKFAYPRPVAMAVA 269 (424)
Q Consensus 194 ~~fwll~~~~~~~~~~~~~~~~~l~~i~~-~~g~s~~~~--~~sl~si~~~~gr~~~G~lsd~-~g~k~~~~r~~~l~~~ 269 (424)
+.+|.+++..++...+.+++...++.+.+ ++|.+..++ +.+.+.....+..+.+|+++|| +||||.+ .++
T Consensus 14 ~~~~~~~~~~~~er~~~y~~~~~l~~yl~~~lg~~~~~a~~i~~~~~~~~~~~~~~~G~laDr~~G~r~~~------~~g 87 (489)
T PRK10207 14 RPFFMIFFVELWERFGYYGVQGILAVFFVKQLGFSQEQAFITFGAFAALVYGLISIGGYVGDHLLGTKRTI------VLG 87 (489)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhhHHHhhhhccchHHHH------HHH
Confidence 45788888888888888888888888765 489887654 6677777788888899999999 9999866 677
Q ss_pred HHHHHHHHHHHHhc-h-hHHHHHHHHHHHHHhhhhHhHHHHHHHHhhCcc--hhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 014462 270 QVVMAFALLYYAIG-W-PGEIYVTTVLVGLSYGAHWAIVPAAASELFGLK--SFGALYNFLTLASPAGSLIFSGVIASGI 345 (424)
Q Consensus 270 ~~~~~~~~ll~~~~-~-~~~l~~~~~l~G~~~G~~~~~~~~~~se~fg~~--~~g~~~g~~~~~~~lgs~l~~~~l~g~l 345 (424)
.+++.++.+++... + ...++++.++.|+|.|...+...++++|.||.+ +++..+++.+++.++|+.+ +|.+.|++
T Consensus 88 ~~~~~~g~~~~~~~~~~~~ll~~~~~l~~ig~g~~~~~~~~li~~~~p~~~~~~~~~~~~~~~~~nig~~~-g~~l~g~l 166 (489)
T PRK10207 88 AIVLAIGYFMTGMSLLKPDLIFIALGTIAVGNGLFKANPASLLSKCYPPKDPRLDGAFTLFYMSINIGSLI-SLSLAPVI 166 (489)
T ss_pred HHHHHHHHHHHHHhccchhHHHHHHHHHHhccccccCCHHHHHHHhcCCCchhhhcchhHHHHHHHHHHHH-HHHHHHHH
Confidence 77777777665533 2 234567888999999999999999999999877 4588999999999999997 99999999
Q ss_pred Hhhhh
Q 014462 346 YDYYA 350 (424)
Q Consensus 346 ~d~~~ 350 (424)
.++.+
T Consensus 167 ~~~~g 171 (489)
T PRK10207 167 ADKFG 171 (489)
T ss_pred HHhhC
Confidence 88766
No 80
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.37 E-value=9.8e-11 Score=118.30 Aligned_cols=156 Identities=15% Similarity=0.168 Sum_probs=117.3
Q ss_pred HHhcHHHHHHHcCCCchh------HHHHHHHHHhhhhhhhhhhhhhhhhhcccCchhHHHHHHHHHHHHHHHHHH-hchh
Q 014462 213 VIDNLGQICQSLGYADTS------IYVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVMAFALLYYA-IGWP 285 (424)
Q Consensus 213 ~~~~l~~i~~~~g~s~~~------~~~sl~si~~~~gr~~~G~lsd~~g~k~~~~r~~~l~~~~~~~~~~~ll~~-~~~~ 285 (424)
+...++.+.++.+.+..+ .+.++.+++..++++..|+++||+++|+.+ .++.++..++.+.+. ..+.
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~g~l~dr~g~~~~~------~~~~~~~~~~~~~~~~~~~~ 311 (408)
T PRK09874 238 IAPILTLYVRELAGNVSNIAFISGMIASVPGVAALLSAPRLGKLGDRIGPEKIL------ITALIFSVLLLIPMSFVQTP 311 (408)
T ss_pred HHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchhH------HHHHHHHHHHHHHHHHhccH
Confidence 344566666664333221 145566788889999999999999987654 333444444443333 2345
Q ss_pred HHHHHHHHHHHHHhhhhHhHHHHHHHHhhCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhccCCCC
Q 014462 286 GEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIASGIYDYYAEKQAGLLWKYNGNML 365 (424)
Q Consensus 286 ~~l~~~~~l~G~~~G~~~~~~~~~~se~fg~~~~g~~~g~~~~~~~lgs~l~~~~l~g~l~d~~~~~~~~~~~~~~~~~~ 365 (424)
+.+++..++.|++.|...+...+.+.+..+.+++|+.+++.+....+|..+ ||.++|.+.|..+
T Consensus 312 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~-gp~~~G~l~~~~g--------------- 375 (408)
T PRK09874 312 LQLGILRFLLGAADGALLPAVQTLLVYNSSNQIAGRIFSYNQSFRDIGNVT-GPLMGAAISANYG--------------- 375 (408)
T ss_pred HHHHHHHHHHHhhhHhhHHHHHHHHHHhCCcccceeeehHHHHHHHHHHHh-hHHHHHHHHhhcc---------------
Confidence 566677888999999999888889999999999999999999999999997 9999999988766
Q ss_pred CcccCCCCCCcccCCcchHHHHHHHHHHHHHHHHHHHHHhhh
Q 014462 366 PVSFRDQETPTCLGSICYSITCGIMAGLCIIAMVMSLIVVHR 407 (424)
Q Consensus 366 ~~~~~~~~~~~c~g~~c~~~~f~i~a~~~~~~~~l~~~l~~~ 407 (424)
|+.+|++.+++.+++++......+|
T Consensus 376 -----------------~~~~f~~~~~~~l~~~~~~~~~~~~ 400 (408)
T PRK09874 376 -----------------FRAVFLVTAGVVLFNAVYSWNSLRR 400 (408)
T ss_pred -----------------hhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999888777654433
No 81
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.36 E-value=4.7e-11 Score=124.23 Aligned_cols=149 Identities=12% Similarity=0.176 Sum_probs=119.0
Q ss_pred HHHHHHHHHHHhhhhHHHHHhcHHHHHHHcCCCchhH--HHHHHHHHhhhhhhhhhhhhhhhhhcccCchhHHHHHHHHH
Q 014462 195 DFLLLFFSLVLASGSGLTVIDNLGQICQSLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVV 272 (424)
Q Consensus 195 ~fwll~~~~~~~~~~~~~~~~~l~~i~~~~g~s~~~~--~~sl~si~~~~gr~~~G~lsd~~g~k~~~~r~~~l~~~~~~ 272 (424)
.+..+++..++...........+|.+.+++|.+..+. +.+...++..++.+..|+++||+|||+.+ ..+.++
T Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~------~~~~~~ 94 (496)
T PRK03893 21 AFSAAWLGYLLDGFDFVLITLVLTEVQGEFGLTTVQAASLISAAFISRWFGGLLLGAMGDRYGRRLAM------VISIVL 94 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHH------HHHHHH
Confidence 4445555555544444455556788888899987654 88888999999999999999999998754 555555
Q ss_pred HHHHHHHHH-hchhHHHHHHHHHHHHHhhhhHhHHHHHHHHhhCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh
Q 014462 273 MAFALLYYA-IGWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIASGIYDYYA 350 (424)
Q Consensus 273 ~~~~~ll~~-~~~~~~l~~~~~l~G~~~G~~~~~~~~~~se~fg~~~~g~~~g~~~~~~~lgs~l~~~~l~g~l~d~~~ 350 (424)
.+++.+++. ..+.+.+++..++.|++.+..++....++.|.++.+++++..++...+..+|+.+ ++.+.+.+.+..+
T Consensus 95 ~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~-~~~~~~~l~~~~~ 172 (496)
T PRK03893 95 FSVGTLACGFAPGYWTLFIARLVIGMGMAGEYGSSATYVIESWPKHLRNKASGFLISGFSIGAVV-AAQVYSLVVPVWG 172 (496)
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHhccCC
Confidence 666655544 3456678888999999999999999999999999999999999999999999997 8999998887665
No 82
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=99.36 E-value=5.9e-10 Score=114.43 Aligned_cols=182 Identities=12% Similarity=0.003 Sum_probs=116.5
Q ss_pred CHHHhhhhHHHHHHHHHHHHh-hhhHHHHHhcHHHHHHH-cCCCchhH--HHHHHHHHhhhhhhhhhhhhhhhhhcccCc
Q 014462 186 TLPQALMKADFLLLFFSLVLA-SGSGLTVIDNLGQICQS-LGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYP 261 (424)
Q Consensus 186 t~~~~l~~~~fwll~~~~~~~-~~~~~~~~~~l~~i~~~-~g~s~~~~--~~sl~si~~~~gr~~~G~lsd~~g~k~~~~ 261 (424)
++++.++++++|.+.+..++. ....+.+.+++|+++++ +|++..+. ..++..+...+++++.|+++||++||+..
T Consensus 234 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~i~~~~~~i~~~~~G~l~Dr~grr~~~- 312 (432)
T PRK10406 234 SLKGLWRNRRAFIMVLGFTAAGSLCFYTFTTYMQKYLVNTAGMHANVASGIMTAALFVFMLIQPLIGALSDKIGRRTSM- 312 (432)
T ss_pred cHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHH-
Confidence 466788888888877665554 45566677899998865 78886544 66677778888999999999999988633
Q ss_pred hhHHHHHHHHHHHHH---HHHHH-hc-hhHHHHHHHHHHHHHhhhhHhHHHHHHHHhhCcchhhHHHHHHHHHHHH-HHH
Q 014462 262 RPVAMAVAQVVMAFA---LLYYA-IG-WPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPA-GSL 335 (424)
Q Consensus 262 r~~~l~~~~~~~~~~---~ll~~-~~-~~~~l~~~~~l~G~~~G~~~~~~~~~~se~fg~~~~g~~~g~~~~~~~l-gs~ 335 (424)
.+..++.++. .+... .. +.........+.+++.+...+..+.+++|+||++.||+++|+.+....+ ++.
T Consensus 313 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~fp~~~r~t~~g~~~~~g~~~~g~ 387 (432)
T PRK10406 313 -----LCFGSLAALFTVPILSALQNVSSPYAAFGLVMCALLIVSFYTSISGILKAEMFPAQVRALGVGLSYAVANALFGG 387 (432)
T ss_pred -----HHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCccchhhhHHHHHHHHHHHh
Confidence 2211111111 11111 11 2222222222233444555566778899999999999999998876554 343
Q ss_pred HHHHHHHHHHHhhhhhhhhhhhhhccCCCCCcccCCCCCCcccCCcchHHHHHHHHHHHHHHHHHHHHHhh
Q 014462 336 IFSGVIASGIYDYYAEKQAGLLWKYNGNMLPVSFRDQETPTCLGSICYSITCGIMAGLCIIAMVMSLIVVH 406 (424)
Q Consensus 336 l~~~~l~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~g~~c~~~~f~i~a~~~~~~~~l~~~l~~ 406 (424)
. .|.+.+. .+..+ .|...+++.+++++++.+..+++..
T Consensus 388 ~-~p~~~~~-l~~~g-------------------------------~~~~~~~~~~~~~~i~~~~~~~l~~ 425 (432)
T PRK10406 388 S-AEYVALS-LKSIG-------------------------------METAFFWYVTLMAVVAFLVSLMLHR 425 (432)
T ss_pred H-HHHHHHH-HHHhC-------------------------------CCcHHHHHHHHHHHHHHHHHHHhhh
Confidence 3 6777774 45444 1666677777777777666665443
No 83
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=99.36 E-value=2.9e-11 Score=120.21 Aligned_cols=145 Identities=14% Similarity=0.189 Sum_probs=114.5
Q ss_pred HHHHHHHHHHHhhhhHHHHHhcHHH-HHHHcCCCchhH--HHHHHHHHhhhhhhhhhhhhhhhhhcccCchhHHHHHHHH
Q 014462 195 DFLLLFFSLVLASGSGLTVIDNLGQ-ICQSLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQV 271 (424)
Q Consensus 195 ~fwll~~~~~~~~~~~~~~~~~l~~-i~~~~g~s~~~~--~~sl~si~~~~gr~~~G~lsd~~g~k~~~~r~~~l~~~~~ 271 (424)
.+|..++++++.......+...+|+ +.+++|.+..+. ..+...++..++.+.+|+++||+|||+.+ .++.+
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~------~~~~~ 75 (366)
T TIGR00886 2 NLFFSWFGFFLSFSVWFAFSPLAVQMIKDDLGLSTAQLGNLVAVPVLAGAVLRIILGFLVDKFGPRYTT------TLSLL 75 (366)
T ss_pred chHHHHHHHHHHHHHHHHhHHhhhHHHHHHhCCCHHHhhHhhHHHHHHHHHHHHHHHHHHHHhCchHHH------HHHHH
Confidence 4688888888877777777888886 667899998764 88899999999999999999999998754 55666
Q ss_pred HHHHHHHHHH-hc-hhHHHHHHHHHHHHHhhhhHhHHHHHHHHhhCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 014462 272 VMAFALLYYA-IG-WPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIASGIYD 347 (424)
Q Consensus 272 ~~~~~~ll~~-~~-~~~~l~~~~~l~G~~~G~~~~~~~~~~se~fg~~~~g~~~g~~~~~~~lgs~l~~~~l~g~l~d 347 (424)
+++++.+++. .. +.+.+++..++.|++.+ .+.....++++.+++++|++..++......+|..+ ++.+.+.+..
T Consensus 76 ~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~-~~~i~~~l~~ 151 (366)
T TIGR00886 76 LLAIPCLWAGLAVQSYSVLLLLRLFIGIAGG-SFASCMPWISFFFPKKIQGTALGLAAGWGNMGGGV-AQFVMPPIIG 151 (366)
T ss_pred HHHHHHHHHHHHhhhHHHHHHHHHHHHHhch-hhHhHHHHHHHhcCHhhhhHHHHHHHHHhHHHHHH-HHHHHHHHHH
Confidence 6666666654 34 56677788889999855 45667889999999999999999998777777775 6666665554
No 84
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.35 E-value=3.6e-11 Score=124.50 Aligned_cols=151 Identities=10% Similarity=0.100 Sum_probs=117.6
Q ss_pred HhcHHHHHHHcCCCchhH--HHHHHHHHhhhhhhhhhhhhhhhhhcccCchhHHHHHHHHHHHHHHHHHHh-chhHHHHH
Q 014462 214 IDNLGQICQSLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVMAFALLYYAI-GWPGEIYV 290 (424)
Q Consensus 214 ~~~l~~i~~~~g~s~~~~--~~sl~si~~~~gr~~~G~lsd~~g~k~~~~r~~~l~~~~~~~~~~~ll~~~-~~~~~l~~ 290 (424)
...++++.+++|.+..+. ..+...++..++.+++|+++||++||+.+ ..+.++.+++.++.+. .+.+.+++
T Consensus 39 ~~~~~~i~~~~g~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~g~r~~l------~~~~~~~~~~~~~~~~~~~~~~l~~ 112 (455)
T TIGR00892 39 TVFFKELQQIFQATYSETAWISSIMLAVLYAGGPISSILVNRFGCRPVV------IAGGLLASLGMILASFSSNVIELYL 112 (455)
T ss_pred hhhHHHHHHHhCcchhHHHHHHHHHHHHHHHhhHHHHHHHHHcCchHHH------HhhHHHHHHHHHHHHHhhhHHHHHH
Confidence 345788888999986654 77778888899999999999999998744 4455555555555443 34445554
Q ss_pred H-HHHHHHHhhhhHhHHHHHHHHhhCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhccCCCCCccc
Q 014462 291 T-TVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIASGIYDYYAEKQAGLLWKYNGNMLPVSF 369 (424)
Q Consensus 291 ~-~~l~G~~~G~~~~~~~~~~se~fg~~~~g~~~g~~~~~~~lgs~l~~~~l~g~l~d~~~~~~~~~~~~~~~~~~~~~~ 369 (424)
. .++.|++.|..+.+..+++.++|+ ++|+++.++.+++..+|+.+ +|.+.|.+.+..+
T Consensus 113 ~~~~l~G~~~~~~~~~~~~~~~~~~~-~~r~~a~g~~~~~~~~g~~~-~~~l~~~l~~~~g------------------- 171 (455)
T TIGR00892 113 TAGFITGLGLAFNFQPSLTMLGKYFY-RRRPLANGLAMAGSPVFLST-LAPLNQYLFESFG------------------- 171 (455)
T ss_pred HHHHHHHhcchhhhhHHHHHHHHHHH-hhHHHHHHHHHhcccHHHHH-HHHHHHHHHHHhC-------------------
Confidence 3 477899988877777888899995 78999999999999999997 8999999988766
Q ss_pred CCCCCCcccCCcchHHHHHHHHHHHHHHHHHHHHH
Q 014462 370 RDQETPTCLGSICYSITCGIMAGLCIIAMVMSLIV 404 (424)
Q Consensus 370 ~~~~~~~c~g~~c~~~~f~i~a~~~~~~~~l~~~l 404 (424)
||++|++.+++++++.+..+++
T Consensus 172 -------------wr~~f~~~~~~~~~~~v~~~~~ 193 (455)
T TIGR00892 172 -------------WRGSFLILGGLLLHCCVCGALM 193 (455)
T ss_pred -------------hHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999888776554444
No 85
>PRK11043 putative transporter; Provisional
Probab=99.35 E-value=6.2e-11 Score=119.98 Aligned_cols=161 Identities=9% Similarity=0.094 Sum_probs=127.1
Q ss_pred hhhhHHHHHhcHHHHHHHcCCCchhH--HHHHHHHHhhhhhhhhhhhhhhhhhcccCchhHHHHHHHHHHHHHHHHHH-h
Q 014462 206 ASGSGLTVIDNLGQICQSLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVMAFALLYYA-I 282 (424)
Q Consensus 206 ~~~~~~~~~~~l~~i~~~~g~s~~~~--~~sl~si~~~~gr~~~G~lsd~~g~k~~~~r~~~l~~~~~~~~~~~ll~~-~ 282 (424)
+..+...+...+|++.+++|.++.+. ..++..++..++.+.+|+++||++||+.+ ..+.++..++.++.. .
T Consensus 18 ~~~~~~~~~p~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~------~~~~~~~~~~~~~~~~~ 91 (401)
T PRK11043 18 GFLATDMYLPAFKAIQADLQTSASAVSASLSLFLAGFALGQLLWGPLSDRYGRKPVL------LAGLSLFALGSLGMLWV 91 (401)
T ss_pred HHHHHHHHHhhHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHhhhhHHhhcCCcHHH------HHHHHHHHHHHHHHHHh
Confidence 33334445556777888899987755 88899999999999999999999998754 455555555555444 3
Q ss_pred chhHHHHHHHHHHHHHhhhhHhHHHHHHHHhhCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhccC
Q 014462 283 GWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIASGIYDYYAEKQAGLLWKYNG 362 (424)
Q Consensus 283 ~~~~~l~~~~~l~G~~~G~~~~~~~~~~se~fg~~~~g~~~g~~~~~~~lgs~l~~~~l~g~l~d~~~~~~~~~~~~~~~ 362 (424)
.+.+.+++..++.|++.+...+...+.+.|.++.++++..++..+....+|+.+ +|.+.|.+.+..+
T Consensus 92 ~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~i~~~l~~~~g------------ 158 (401)
T PRK11043 92 ESAAQLLVLRFVQAVGVCSAAVIWQALVIDRYPAQKANRVFATIMPLVALSPAL-APLLGAWLLNHFG------------ 158 (401)
T ss_pred cCHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhcCC------------
Confidence 455667778889999988888888889999999999999999998888999987 8999999988766
Q ss_pred CCCCcccCCCCCCcccCCcchHHHHHHHHHHHHHHHHHHHHHh
Q 014462 363 NMLPVSFRDQETPTCLGSICYSITCGIMAGLCIIAMVMSLIVV 405 (424)
Q Consensus 363 ~~~~~~~~~~~~~~c~g~~c~~~~f~i~a~~~~~~~~l~~~l~ 405 (424)
|+..|++.+.+.++..++.+.+.
T Consensus 159 --------------------~~~~~~~~~~~~~~~~~~~~~~~ 181 (401)
T PRK11043 159 --------------------WQAIFATLFAITLLLILPTLRLK 181 (401)
T ss_pred --------------------hHHHHHHHHHHHHHHHHHHHHcC
Confidence 99999999888887766655443
No 86
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=99.34 E-value=5.5e-11 Score=123.82 Aligned_cols=173 Identities=13% Similarity=0.106 Sum_probs=118.8
Q ss_pred HHHHHhhhhHHHHHhcHHHHHHHcCCCchhH--HHHHHHHHhhhhhhhhhhhhhhhhhcccCchhHHHHHHHHHHHHHHH
Q 014462 201 FSLVLASGSGLTVIDNLGQICQSLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVMAFALL 278 (424)
Q Consensus 201 ~~~~~~~~~~~~~~~~l~~i~~~~g~s~~~~--~~sl~si~~~~gr~~~G~lsd~~g~k~~~~r~~~l~~~~~~~~~~~l 278 (424)
+.+++...........+|.+.+++|.+..+. ..+...++..++.+.+|+++||+|+|+.+ ..+.++.+++.+
T Consensus 43 ~~~~~~~~~~~~~~~~~~~l~~~~gls~~~~g~~~~~~~~~~~~~~~~~G~l~dr~G~r~~~------~~~~~~~~~~~~ 116 (476)
T PLN00028 43 ISFFTCFVSTFAAAPLLPIIRDNLNLTKSDIGNAGIASVSGSIFSRLAMGPVCDLYGPRYGS------AFLLMLTAPAVF 116 (476)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHH------HHHHHHHHHHHH
Confidence 3333333333444455778888899987654 66677788889999999999999998644 444555555554
Q ss_pred HHH-hchhHHHHHHHHHHHHHhhhhHhHHHHHHHHhhCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhh
Q 014462 279 YYA-IGWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIASGIYDYYAEKQAGLL 357 (424)
Q Consensus 279 l~~-~~~~~~l~~~~~l~G~~~G~~~~~~~~~~se~fg~~~~g~~~g~~~~~~~lgs~l~~~~l~g~l~d~~~~~~~~~~ 357 (424)
+.. ..+...+++..++.|++.+... .....++++|+.++||.+.++.+....+|+.+ ++.+.+.+.+.....
T Consensus 117 ~~~~~~s~~~l~~~r~l~G~~~~~~~-~~~~~i~~~~~~~~rg~a~g~~~~~~~~g~~~-~~~~~~~i~~~~~~~----- 189 (476)
T PLN00028 117 CMSLVSSATGFIAVRFFIGFSLATFV-SCQYWMSTMFNGKIVGTANGIAAGWGNLGGGV-TQLLMPLVFPLIKDA----- 189 (476)
T ss_pred HHHHhcCHHHHHHHHHHHHHHHHhhH-HHHHHHHHhcChhheeHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHhc-----
Confidence 444 3455667777888999887654 45567899999999999999998877777775 666666554322100
Q ss_pred hhccCCCCCcccCCCCCCcccCCcchHHHHHHHHHHHHHHHHHHHHH
Q 014462 358 WKYNGNMLPVSFRDQETPTCLGSICYSITCGIMAGLCIIAMVMSLIV 404 (424)
Q Consensus 358 ~~~~~~~~~~~~~~~~~~~c~g~~c~~~~f~i~a~~~~~~~~l~~~l 404 (424)
.|.+...||++|++.++++++..++.+++
T Consensus 190 ------------------~~~~~~gWr~~f~i~g~l~l~~~l~~~~~ 218 (476)
T PLN00028 190 ------------------GAPSFTAWRIAFFVPGLLHIIMGILVLTL 218 (476)
T ss_pred ------------------CCcchhhhHHHHHHHHHHHHHHHHHHHHH
Confidence 00011139999999999888776665554
No 87
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.34 E-value=3.1e-11 Score=120.21 Aligned_cols=161 Identities=17% Similarity=0.104 Sum_probs=116.3
Q ss_pred CCCHHHhhhhHH--HHHHHHHHHHhhhhHHHHHhcHHHHHH-HcCCCchhH--HHHHHHHHhhhhhhhhhhhhhhhhhcc
Q 014462 184 DFTLPQALMKAD--FLLLFFSLVLASGSGLTVIDNLGQICQ-SLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKF 258 (424)
Q Consensus 184 ~~t~~~~l~~~~--fwll~~~~~~~~~~~~~~~~~l~~i~~-~~g~s~~~~--~~sl~si~~~~gr~~~G~lsd~~g~k~ 258 (424)
..+.++.+++++ ++......++..........++|.+.+ ++|.+.... ..+...+++.+++++.|+++||+++|+
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~ 286 (394)
T TIGR00883 207 RGPIRETLTKHRKPFLLGLGLVIATTTTFYLITTYLPTYLTQTLGLSANSALLVLMLSLILFFITIPLSGALSDRIGRRP 286 (394)
T ss_pred cCCHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhchHH
Confidence 445777777765 777766666666666666778888884 478876544 677888999999999999999999876
Q ss_pred cCchhHHHHHHHHHHHHH--HHH-HH-hchhHHHHHHHHHHHHHhhhhHhHHHHHHHHhhCcchhhHHHHHH-HHHHHHH
Q 014462 259 AYPRPVAMAVAQVVMAFA--LLY-YA-IGWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFL-TLASPAG 333 (424)
Q Consensus 259 ~~~r~~~l~~~~~~~~~~--~ll-~~-~~~~~~l~~~~~l~G~~~G~~~~~~~~~~se~fg~~~~g~~~g~~-~~~~~lg 333 (424)
.. .....+....+ .+. +. ..+.+.++...++.|++.+..+++..+.++|.+|.+++++++++. +.+..+|
T Consensus 287 ~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~g 361 (394)
T TIGR00883 287 VL-----IIFTVLAALLAVPLLMALLDSGSFTLFFFLVLGLALIGGMYTGPMGSFLPELFPTEVRYTGASLAYNLAGAIF 361 (394)
T ss_pred HH-----HHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHhhhHHHHHHHhCCccceeeEeeehhHhHHHHH
Confidence 43 11111111112 111 11 123445556677888999999999999999999999999999984 4566778
Q ss_pred HHHHHHHHHHHHHhhhh
Q 014462 334 SLIFSGVIASGIYDYYA 350 (424)
Q Consensus 334 s~l~~~~l~g~l~d~~~ 350 (424)
+.+ +|.+.|.++|+.+
T Consensus 362 ~~~-~p~~~g~l~~~~g 377 (394)
T TIGR00883 362 GGF-APYIAAALVAMTG 377 (394)
T ss_pred hhH-HHHHHHHHHHHcC
Confidence 876 8999999999876
No 88
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.34 E-value=1.3e-09 Score=112.28 Aligned_cols=189 Identities=17% Similarity=0.105 Sum_probs=128.0
Q ss_pred CCCCHHHhhhhHHH----HHHHHHHHHhhhhHHHHHh-cHHHHHHHcCCCchhH--HHHHHHHHhhhhhhhhhhhhhhhh
Q 014462 183 EDFTLPQALMKADF----LLLFFSLVLASGSGLTVID-NLGQICQSLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIV 255 (424)
Q Consensus 183 ~~~t~~~~l~~~~f----wll~~~~~~~~~~~~~~~~-~l~~i~~~~g~s~~~~--~~sl~si~~~~gr~~~G~lsd~~g 255 (424)
++.+++|+++++.. ++.+...++...++...++ +...+.++.|++...+ .....++.+.+..+.+.++.||+|
T Consensus 254 ~~~sl~~~~~~~~lR~~~~i~~~v~~~qq~sGi~ai~~Yst~i~~~aG~~~~~a~~an~~~g~v~~~~t~~~~~lid~~g 333 (485)
T KOG0569|consen 254 KQISLRQLLKNPTLRRPLLIGIVVSFAQQFSGINAIFFYSTSIFKTAGFTPEEAQYANLGIGIVNLLSTLVSPFLIDRLG 333 (485)
T ss_pred cCCcHHHHhcCcchhHHHHHHHHHHHHHHhcCcceeHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 56789999997644 3444455555555554443 4555778889987644 777889999999999999999999
Q ss_pred hcccCchhHHHHHHHHHHHHHHHHHH-------hchhHH---HHHHHHHHHHHhhhh-HhHHHHHHHHhhCcchhhHHHH
Q 014462 256 RKFAYPRPVAMAVAQVVMAFALLYYA-------IGWPGE---IYVTTVLVGLSYGAH-WAIVPAAASELFGLKSFGALYN 324 (424)
Q Consensus 256 ~k~~~~r~~~l~~~~~~~~~~~ll~~-------~~~~~~---l~~~~~l~G~~~G~~-~~~~~~~~se~fg~~~~g~~~g 324 (424)
||+.. ..+..++++..+++. ....+. .+++.++..++++.. -++.+-+.+|+||.+.|+.+..
T Consensus 334 RRpLl------l~~~~~~~~~~~~~~~~~~l~~~~~~~~~y~~i~~~~~~~~~f~~G~gpi~~fi~aELf~~~~R~aa~s 407 (485)
T KOG0569|consen 334 RRPLL------LISLSLMAVALLLMSIALFLSNSFGSWLSYLCIAAIFLFIISFAIGPGPIPWFIGAELFPQSARSAAQS 407 (485)
T ss_pred CcHHH------HHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhhcCCCchhHHHHHHhCCccchHHHHH
Confidence 98644 333334333333322 111121 233444444444433 3567789999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhccCCCCCcccCCCCCCcccCCcchHHHHHHHHHHHHHHHHHHHHH
Q 014462 325 FLTLASPAGSLIFSGVIASGIYDYYAEKQAGLLWKYNGNMLPVSFRDQETPTCLGSICYSITCGIMAGLCIIAMVMSLIV 404 (424)
Q Consensus 325 ~~~~~~~lgs~l~~~~l~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~g~~c~~~~f~i~a~~~~~~~~l~~~l 404 (424)
+..+.+.+..++ -...+-.+++..| ...|++..+.|++..+..+..
T Consensus 408 ~~~~~~w~~~fi-v~~~fp~l~~~~g---------------------------------~~~filF~i~~~~~~i~~~~~ 453 (485)
T KOG0569|consen 408 VATAVNWLSNFI-VGFAFPPLQNVIG---------------------------------PYVFILFVIPLAIFLIYLYRY 453 (485)
T ss_pred HHHHHHHHHHHH-HHHHHHHHHHHhc---------------------------------chhhHHHHHHHHHHHHHHHHh
Confidence 999999988876 3555555555555 266888888888887777777
Q ss_pred hhhhhHH
Q 014462 405 VHRTKSV 411 (424)
Q Consensus 405 ~~~~~~~ 411 (424)
..+||..
T Consensus 454 lPETkgr 460 (485)
T KOG0569|consen 454 LPETKGR 460 (485)
T ss_pred CcccCCC
Confidence 7888743
No 89
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=99.34 E-value=6e-12 Score=124.73 Aligned_cols=162 Identities=14% Similarity=0.170 Sum_probs=127.0
Q ss_pred HhhhhHHHHHhcHHHHHHHcCCCchhH--HHHHHHHHhhhhhhhhhhhhhhhhhcccCchhHHHHHHHHHHHHHHHHHH-
Q 014462 205 LASGSGLTVIDNLGQICQSLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVMAFALLYYA- 281 (424)
Q Consensus 205 ~~~~~~~~~~~~l~~i~~~~g~s~~~~--~~sl~si~~~~gr~~~G~lsd~~g~k~~~~r~~~l~~~~~~~~~~~ll~~- 281 (424)
+.......+...+|.+.+++|.+..+. +.++..++..++.+..|+++||+|||+.+ .++.++.+++.+++.
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~------~~~~~~~~~~~~~~~~ 79 (379)
T TIGR00881 6 AYYLVRKNFALAMPYLVEEIGLSKTDLGLLLSSFSIAYGISKFVMGSVSDRSNPRVFL------PIGLILCAIVNLFFGF 79 (379)
T ss_pred HHHHhHHhhhhhhHHHHHHhCCCHhHHHHHHHHHHHHHHhhhhhhhHHHHhhCCeehh------HHHHHHHHHHHHHHHH
Confidence 333444445556788888899987654 88899999999999999999999998765 555666666665554
Q ss_pred hchhHHHHHHHHHHHHHhhhhHhHHHHHHHHhhCcchhhHHHHHHHHHHHHHHHHHHHH-HHHHHHhhhhhhhhhhhhhc
Q 014462 282 IGWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGV-IASGIYDYYAEKQAGLLWKY 360 (424)
Q Consensus 282 ~~~~~~l~~~~~l~G~~~G~~~~~~~~~~se~fg~~~~g~~~g~~~~~~~lgs~l~~~~-l~g~l~d~~~~~~~~~~~~~ 360 (424)
..+.+.+++..++.|++.|..++...++++|.++.+++++..++.+....+|+.+ ++. +.+.+.+..+
T Consensus 80 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~---------- 148 (379)
T TIGR00881 80 STSLWVMAALWALNGIFQGMGWPPCGRTVTKWFSRSERGTWVSFWNCSHNVGGGL-LPPLVLFGIAELYS---------- 148 (379)
T ss_pred hhhHHHHHHHHHHHHhhccccCCchHHHHHHhcCHhhheeeEeehhccchhHHHH-HHHHHHHHHHhcCC----------
Confidence 3456677888999999999999999999999999999999999999999999997 784 5555554433
Q ss_pred cCCCCCcccCCCCCCcccCCcchHHHHHHHHHHHHHHHHHHHHHh
Q 014462 361 NGNMLPVSFRDQETPTCLGSICYSITCGIMAGLCIIAMVMSLIVV 405 (424)
Q Consensus 361 ~~~~~~~~~~~~~~~~c~g~~c~~~~f~i~a~~~~~~~~l~~~l~ 405 (424)
|++.|++.++++++..++.+++.
T Consensus 149 ----------------------~~~~~~~~~~~~~~~~~~~~~~~ 171 (379)
T TIGR00881 149 ----------------------WHWVFIVPGIIAIIVSLICFLLL 171 (379)
T ss_pred ----------------------chhHHHHHHHHHHHHHHHHheee
Confidence 99999998887777665555443
No 90
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=99.34 E-value=2.6e-10 Score=117.96 Aligned_cols=159 Identities=14% Similarity=0.141 Sum_probs=110.6
Q ss_pred HHhcHHHHHHHcCCCchh--HHHHHHHHHhhhhhhhhhhhhhhhhhcccCchhHHHHHHHHHHHHHHHHHHh---ch-hH
Q 014462 213 VIDNLGQICQSLGYADTS--IYVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVMAFALLYYAI---GW-PG 286 (424)
Q Consensus 213 ~~~~l~~i~~~~g~s~~~--~~~sl~si~~~~gr~~~G~lsd~~g~k~~~~r~~~l~~~~~~~~~~~ll~~~---~~-~~ 286 (424)
..++.|.+.++.|.+... ......++.+.++.+++|+++||++||+.. ..+.++++++.+++.. .+ ..
T Consensus 290 ~~~~~p~i~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~r~~~------i~~~~~~~v~~~~l~~~~~~~~~~ 363 (479)
T PRK10077 290 VLYYAPEIFKTLGASTDIALLQTIIVGVINLTFTVLAIMTVDKFGRKPLQ------IIGALGMAIGMFSLGTAFYTQAPG 363 (479)
T ss_pred HHHHHHHHHHHcCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhcChHHH------HHhHHHHHHHHHHHHHHHhcCccc
Confidence 345678888888987543 355677889999999999999999987644 4445555555444331 11 11
Q ss_pred -HHHHHHHHHHHHhhhhH-hHHHHHHHHhhCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHH------hhhhhhhhhhhh
Q 014462 287 -EIYVTTVLVGLSYGAHW-AIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIASGIY------DYYAEKQAGLLW 358 (424)
Q Consensus 287 -~l~~~~~l~G~~~G~~~-~~~~~~~se~fg~~~~g~~~g~~~~~~~lgs~l~~~~l~g~l~------d~~~~~~~~~~~ 358 (424)
......++.+++.+..+ +..+..++|.+|+++||++.|+.+....+|+++ ++.+.+.+. |..+
T Consensus 364 ~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~g~~~-~~~~~p~~~~~~~~~~~~~-------- 434 (479)
T PRK10077 364 IVALLSMLFYVAAFAMSWGPVCWVLLSEIFPNAIRGKALAIAVAAQWIANYF-VSWTFPMMDKNSWLVAHFH-------- 434 (479)
T ss_pred HHHHHHHHHHHHHHhccccchhHHHhHhhCChhHHHHHHHHHHHHHHHHHHH-HHHHhHHHHhccchhhhcc--------
Confidence 22334445555555433 567899999999999999999999999999987 666665444 2222
Q ss_pred hccCCCCCcccCCCCCCcccCCcchHHHHHHHHHHHHHHHHHHHHHhhhhhH
Q 014462 359 KYNGNMLPVSFRDQETPTCLGSICYSITCGIMAGLCIIAMVMSLIVVHRTKS 410 (424)
Q Consensus 359 ~~~~~~~~~~~~~~~~~~c~g~~c~~~~f~i~a~~~~~~~~l~~~l~~~~~~ 410 (424)
++.+|++.++++++++++.+++.+++|+
T Consensus 435 ------------------------~~~~~~~~~~~~~~~~~~~~~~~~e~~~ 462 (479)
T PRK10077 435 ------------------------NGFSYWIYGCMGVLAALFMWKFVPETKG 462 (479)
T ss_pred ------------------------CccHHHHHHHHHHHHHHHHHhccccCCC
Confidence 6778888888888887777666655553
No 91
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.34 E-value=5e-11 Score=116.55 Aligned_cols=171 Identities=22% Similarity=0.296 Sum_probs=141.0
Q ss_pred HHHHHHHHHHHHhhhhHHHHHhcHHHHHHHc-CCCchhH--HHHHHHHHhhhhhhhhhhhhhhhhhcc-cCchhHHHHHH
Q 014462 194 ADFLLLFFSLVLASGSGLTVIDNLGQICQSL-GYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKF-AYPRPVAMAVA 269 (424)
Q Consensus 194 ~~fwll~~~~~~~~~~~~~~~~~l~~i~~~~-g~s~~~~--~~sl~si~~~~gr~~~G~lsd~~g~k~-~~~r~~~l~~~ 269 (424)
+++|.+.+..++..........+.+.+.++. |.+..+. ..+...++..++++..|++.||+++|+ .+ ..+
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~------~~~ 248 (352)
T cd06174 175 RLLLLLALAFFLLSFGYYGLLTYLPLYLQEVLGLSAAEAGLLLSLFGLGGILGALLGGLLSDRLGRRRLLL------LIG 248 (352)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHH------HHH
Confidence 6677777777777777777778888888775 8876654 788889999999999999999999886 33 455
Q ss_pred HHHHHHHHHHHHh-chhHHHHHHHHHHHHHhhhhHhHHHHHHHHhhCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 014462 270 QVVMAFALLYYAI-GWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIASGIYDY 348 (424)
Q Consensus 270 ~~~~~~~~ll~~~-~~~~~l~~~~~l~G~~~G~~~~~~~~~~se~fg~~~~g~~~g~~~~~~~lgs~l~~~~l~g~l~d~ 348 (424)
..+..++.+.+.. .+...+++..++.|++.+..++...+.+.|.+|.+++|+.+++.+....+|+.+ ++.+.|.++|.
T Consensus 249 ~~~~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i-~~~i~g~l~~~ 327 (352)
T cd06174 249 LLLAALGLLLLALAPSLALLLVALLLLGFGLGFAFPALLTLASELAPPEARGTASGLFNTFGSLGGAL-GPLLAGLLLDT 327 (352)
T ss_pred HHHHHHHHHHHHHhccHHHHHHHHHHHHHHHhccchhHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHhcc
Confidence 5555566555543 345677888999999999999999999999999999999999999999999998 89999999986
Q ss_pred hhhhhhhhhhhccCCCCCcccCCCCCCcccCCcchHHHHHHHHHHHHHHHHHHHH
Q 014462 349 YAEKQAGLLWKYNGNMLPVSFRDQETPTCLGSICYSITCGIMAGLCIIAMVMSLI 403 (424)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~g~~c~~~~f~i~a~~~~~~~~l~~~ 403 (424)
.+ |+..|.+.+++++++.+...+
T Consensus 328 ~~--------------------------------~~~~~~~~~~~~~i~~i~~~~ 350 (352)
T cd06174 328 GG--------------------------------YGGVFLILAALALLAALLLLL 350 (352)
T ss_pred cC--------------------------------cchHHHHHHHHHHHHHHHhee
Confidence 55 899999999988887776543
No 92
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=99.34 E-value=1.8e-10 Score=118.69 Aligned_cols=189 Identities=12% Similarity=0.129 Sum_probs=131.1
Q ss_pred hhhHHHHHHHHHHHHhhhhHHHHHhcHHHHHH-HcCCCchhH--HHHHHHHHhhhhhhhhhhhhhhhhhcccCchhHHHH
Q 014462 191 LMKADFLLLFFSLVLASGSGLTVIDNLGQICQ-SLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMA 267 (424)
Q Consensus 191 l~~~~fwll~~~~~~~~~~~~~~~~~l~~i~~-~~g~s~~~~--~~sl~si~~~~gr~~~G~lsd~~g~k~~~~r~~~l~ 267 (424)
..++.+|+.+++++.+...-.......+.+.+ ++|++.++. +.++..+...++|+..|++.||+|.|+.. .
T Consensus 31 ~a~r~l~~s~~~f~~~F~~w~~~~~l~~~~~~~~~~ls~~q~g~l~ai~~l~~al~rip~G~l~Dr~G~R~v~------~ 104 (462)
T PRK15034 31 IARRNLWISVSCLLLAFCVWMLFSAVTVNLNKIGFNFTTDQLFLLTALPSVSGALLRVPYSFMVPIFGGRRWT------V 104 (462)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHH------H
Confidence 34456777777776666555555555666665 699998765 88889999999999999999999988755 4
Q ss_pred HHHHHHHHHHHHHHh------chhHHHHHHHHHHHHHhhhhHhHHHHHHHHhhCcchhhHHHHHHHHHHHHHHHH---HH
Q 014462 268 VAQVVMAFALLYYAI------GWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLI---FS 338 (424)
Q Consensus 268 ~~~~~~~~~~ll~~~------~~~~~l~~~~~l~G~~~G~~~~~~~~~~se~fg~~~~g~~~g~~~~~~~lgs~l---~~ 338 (424)
++.++.+++.++... .+...+++..++.|++ |+.++.....++++||++++|++.|+......+|..+ +.
T Consensus 105 ~~~ll~~i~~~~~~~a~~~~~~s~~~lli~r~l~Gig-g~~f~~~~~~vs~wfp~~~rG~A~Gi~~g~G~~G~~l~~~l~ 183 (462)
T PRK15034 105 FSTAILIIPCVWLGIAVQNPNTPFGIFIVIALLCGFA-GANFASSMGNISFFFPKAKQGSALGINGGLGNLGVSVMQLVA 183 (462)
T ss_pred HHHHHHHHHHHHHHHHHcccCCCHHHHHHHHHHHHHH-HHhHHHHHHHHHHHCCHhHhHHHHHHHHHHHhhHHHHHHHHH
Confidence 444555555554443 4667888999999998 7888999999999999999999999995444455543 14
Q ss_pred HHHHH-HHHhhhhhhhhhhhhhccCCCCCcccCCCCCCccc-CCcchHHHHHHHHHHHHHHHHHHHHHhh
Q 014462 339 GVIAS-GIYDYYAEKQAGLLWKYNGNMLPVSFRDQETPTCL-GSICYSITCGIMAGLCIIAMVMSLIVVH 406 (424)
Q Consensus 339 ~~l~g-~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~-g~~c~~~~f~i~a~~~~~~~~l~~~l~~ 406 (424)
|.+.+ .+++..|.+.. . .-. +...++.++++...+.+++.++.+++..
T Consensus 184 p~~i~~~l~~~~G~~~~----------------~----~~~g~~~~~~~~~~~~~~~~iv~~i~~~~~~~ 233 (462)
T PRK15034 184 PLVIFVPVFAFLGVNGV----------------P----QADGSVMSLANAAWIWVPLLAIATIAAWSGMN 233 (462)
T ss_pred HHHHHHHHHHHhccccc----------------c----ccccchHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 44443 34444442110 0 000 1234889998998888887777776543
No 93
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=99.33 E-value=6.9e-10 Score=111.32 Aligned_cols=182 Identities=16% Similarity=0.233 Sum_probs=139.1
Q ss_pred HHhhhhHHHHHHHHHHHHhhhhHHHHHhcHHHHHHH-cCCCchhH--HHHHHHHHhhhhhhhhhhhhhhhhhcccCchhH
Q 014462 188 PQALMKADFLLLFFSLVLASGSGLTVIDNLGQICQS-LGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPV 264 (424)
Q Consensus 188 ~~~l~~~~fwll~~~~~~~~~~~~~~~~~l~~i~~~-~g~s~~~~--~~sl~si~~~~gr~~~G~lsd~~g~k~~~~r~~ 264 (424)
.+.++++..|......++..+..++...++.+++++ .|++.... ....++++.++|..++|+++|| +.|+..
T Consensus 205 ~~~l~~p~v~~~l~~t~l~~~g~F~~ftYi~P~L~~v~g~s~~~vs~~Ll~~Gv~~~~Gn~~gGrl~dr-~~~~~l---- 279 (394)
T COG2814 205 LRLLRRPGVLLGLLATFLFMTGHFALYTYIRPFLESVAGFSVSAVSLVLLAFGIAGFIGNLLGGRLADR-GPRRAL---- 279 (394)
T ss_pred HHHhcCchHHHHHHHHHHHHcchhhhHHhHHHHHHHccCCCHhHHHHHHHHHHHHHHHHHHHHhhhccc-cchhHH----
Confidence 448999999999999999988888888888888877 68887654 8889999999999999999999 655433
Q ss_pred HHHHHHHHHHHHHHHHH--hchhHHHHHHHHHHHHHhhhhHhHHHHHHHHhhCcchhhHHHHHHHHHHHHHHHHHHHHHH
Q 014462 265 AMAVAQVVMAFALLYYA--IGWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIA 342 (424)
Q Consensus 265 ~l~~~~~~~~~~~ll~~--~~~~~~l~~~~~l~G~~~G~~~~~~~~~~se~fg~~~~g~~~g~~~~~~~lgs~l~~~~l~ 342 (424)
.....++++..+.+. ..+.....+..++.|+..+........-.++ .-+++.+.+.++...+.++|..+ |..++
T Consensus 280 --~~~~~l~a~~~l~l~~~~~~~~~~~~~~~~wg~a~~~~~~~~~~~~a~-~~p~~~~~a~sl~~aa~nlgia~-GA~lG 355 (394)
T COG2814 280 --IAALLLLALALLALTFTGASPALALALLFLWGFAFSPALQGLQTRLAR-LAPDAADLAGSLNVAAFNLGIAL-GAALG 355 (394)
T ss_pred --HHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHhhhhhhHHHHHhcc-cCCCchHHHHHHHHHHHHHHHHH-HHHHH
Confidence 333344444444433 2334444555556677666655556666666 44688999999999999999997 99999
Q ss_pred HHHHhhhhhhhhhhhhhccCCCCCcccCCCCCCcccCCcchHHHHHHHHHHHHHHHHHHHHHhhhhhH
Q 014462 343 SGIYDYYAEKQAGLLWKYNGNMLPVSFRDQETPTCLGSICYSITCGIMAGLCIIAMVMSLIVVHRTKS 410 (424)
Q Consensus 343 g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~g~~c~~~~f~i~a~~~~~~~~l~~~l~~~~~~ 410 (424)
|.++|+.| |..+.++.+.+.+++.++.++..++.|+
T Consensus 356 G~v~~~~g--------------------------------~~~~~~~~a~l~~~a~~~~~~~~~~~~~ 391 (394)
T COG2814 356 GLVLDALG--------------------------------YAATGWVGAALLLLALLLALLSARKDRR 391 (394)
T ss_pred HHHHHhhc--------------------------------hHHHHHHHHHHHHHHHHHHHHHHhcccc
Confidence 99999976 9999999999999998888776554443
No 94
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=99.32 E-value=8.4e-11 Score=118.50 Aligned_cols=176 Identities=16% Similarity=0.103 Sum_probs=126.3
Q ss_pred HHHhhhhHHHHHHHHHHHHhhhhHHHHHhcHHHHHHHcCCCchhH-HHHHHHHHhhhhhhhhhhhhhhhhhcccCchhHH
Q 014462 187 LPQALMKADFLLLFFSLVLASGSGLTVIDNLGQICQSLGYADTSI-YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVA 265 (424)
Q Consensus 187 ~~~~l~~~~fwll~~~~~~~~~~~~~~~~~l~~i~~~~g~s~~~~-~~sl~si~~~~gr~~~G~lsd~~g~k~~~~r~~~ 265 (424)
++++++++.+|.+....++.....+++.+|+|+++++.|++.... ..++..+ .|.+..++++||..||+. |...
T Consensus 185 ~~~ll~~~~~~~~~~~~~~~~~~~~~~~~wlp~~L~~~g~s~~~~~~~~l~~~---~g~~g~~~~~d~~~r~~~--r~~~ 259 (368)
T TIGR00903 185 FGALAGRKDLWIIGAILGFGVALFDNLAIWLEAALRPAGLEDIAGDAVALAIL---AGLIGVAVIPDRVARAGL--RSIY 259 (368)
T ss_pred HHHHHcChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCChHHHHHHHHHHH---HHHHHHHHhhHHhhhhhh--HHHH
Confidence 456899999999999999999999999999999998888875422 3334344 444556899999976532 1122
Q ss_pred HHHHHHHHHHHHHHHHh-chhHHHHHHHHHHHHHhhhhHhHHHHHHHHhhCcchhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 014462 266 MAVAQVVMAFALLYYAI-GWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIASG 344 (424)
Q Consensus 266 l~~~~~~~~~~~ll~~~-~~~~~l~~~~~l~G~~~G~~~~~~~~~~se~fg~~~~g~~~g~~~~~~~lgs~l~~~~l~g~ 344 (424)
.....+++++..+.+.. .+.....+...+.|++.+..++..+++.+|.+|++.||++.|+.+....+|+.+ +|.+.+.
T Consensus 260 ~~~~~~~~a~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~rgt~~G~~~~~g~~~~~~-~~~~~~~ 338 (368)
T TIGR00903 260 IRAAALLIAAFFLALAFELNRLALFAFIGIAGLLMLPAYAIIMDWIGKFCDKELHGKAAGAIGFTSRAISVA-LALAAML 338 (368)
T ss_pred HHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHhhhhhHHHHHHHHHHhcchhhcCcccchhhHHHHHHHHH-HHHHHHH
Confidence 22222333333333332 223334445566677777777888899999999999999999999999999987 7888886
Q ss_pred HHhhhhhhhhhhhhhccCCCCCcccCCCCCCcccCCcchHHHHHHHHHHHHHHHHHHH
Q 014462 345 IYDYYAEKQAGLLWKYNGNMLPVSFRDQETPTCLGSICYSITCGIMAGLCIIAMVMSL 402 (424)
Q Consensus 345 l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~g~~c~~~~f~i~a~~~~~~~~l~~ 402 (424)
+.. + .+..|.+.+..++++++..+
T Consensus 339 ~~~--~--------------------------------~~~~f~~~~~~~~i~~~~~~ 362 (368)
T TIGR00903 339 FIS--S--------------------------------AEAYFTFLAILITIAFAIAL 362 (368)
T ss_pred Hhc--C--------------------------------HHHHHHHHHHHHHHHHHHHH
Confidence 662 3 66778888888888776653
No 95
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=99.32 E-value=2.6e-11 Score=125.80 Aligned_cols=173 Identities=13% Similarity=0.085 Sum_probs=125.6
Q ss_pred HHHHHHHHHHhhhhHHH----HHhcHHHHHHHcCCCchhH--HHHHHHHHhhhhhhhhhhhhhhhhhcccCchhHHHHHH
Q 014462 196 FLLLFFSLVLASGSGLT----VIDNLGQICQSLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVA 269 (424)
Q Consensus 196 fwll~~~~~~~~~~~~~----~~~~l~~i~~~~g~s~~~~--~~sl~si~~~~gr~~~G~lsd~~g~k~~~~r~~~l~~~ 269 (424)
+|.++...+++....+. +...+|.+.+++|.+..+. +.+.+.++..++.+..|+++||+|+|+.+ .++
T Consensus 27 ~~~i~~~~~~~~~~~y~~r~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~r~~l------~~~ 100 (467)
T PRK09556 27 FMQSYLVVFIGYLTMYLIRKNFKAAQNDMISTYGLSTTELGMIGLGFSITYGVGKTLVGYYADGKNTKQFL------PFL 100 (467)
T ss_pred HHHHHHHHHHHHHHHHHHhcChhhhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhhhHhhccCccchH------HHH
Confidence 45455444444443332 2334788889999987654 88889999999999999999999998765 333
Q ss_pred HHHHHHHHHHHH------hchhHHHHHHHHHHHHHhhhhHhHHHHHHHHhhCcchhhHHHHHHHHHHHHHHHHHHHHHHH
Q 014462 270 QVVMAFALLYYA------IGWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIAS 343 (424)
Q Consensus 270 ~~~~~~~~ll~~------~~~~~~l~~~~~l~G~~~G~~~~~~~~~~se~fg~~~~g~~~g~~~~~~~lgs~l~~~~l~g 343 (424)
.++.+++.+.+. ..+.+.+++..++.|++.|..++....+++++||+++||++.|+...+..+|..+ ++.+..
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~rg~a~gi~~~~~~lG~~l-~~~i~~ 179 (467)
T PRK09556 101 LILSAICMLGFGASLGSGSVSLGLMIALWALSGFFQSTGGPCSYSTITRWTPRRKRGRFLGFWNISHNLGGAG-AGGVAL 179 (467)
T ss_pred HHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHhccchHHHHHHHHHcCccceeeeEEeeecccchhhhH-HHHHHH
Confidence 333333322222 2456678888999999999999999999999999999999999999999999997 788777
Q ss_pred HHHhhhhhhhhhhhhhccCCCCCcccCCCCCCcccCCcchHHHHHHHHHHHHHHHHHHHHH
Q 014462 344 GIYDYYAEKQAGLLWKYNGNMLPVSFRDQETPTCLGSICYSITCGIMAGLCIIAMVMSLIV 404 (424)
Q Consensus 344 ~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~g~~c~~~~f~i~a~~~~~~~~l~~~l 404 (424)
.+.+.... .+|+..|.+.+.+.++..++.+++
T Consensus 180 ~~~~~~~~-----------------------------~~~~~~f~~~g~~~~~~~i~~~~~ 211 (467)
T PRK09556 180 WGANYFFD-----------------------------GHVIGMFIFPSIIALIIGFIGLRY 211 (467)
T ss_pred HHHHhhcc-----------------------------CcchhHHHHHHHHHHHHHHHHHHh
Confidence 66554210 028888888887776655555444
No 96
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.31 E-value=7.7e-11 Score=119.74 Aligned_cols=148 Identities=11% Similarity=0.025 Sum_probs=110.0
Q ss_pred HHHHHHHHHhhhhHHHHHhcHHHHHHHcCCCchhH--HHHHHHHHhhhhhhhhhhhhhhhhhcccCchhHHHHHHHHHHH
Q 014462 197 LLLFFSLVLASGSGLTVIDNLGQICQSLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVMA 274 (424)
Q Consensus 197 wll~~~~~~~~~~~~~~~~~l~~i~~~~g~s~~~~--~~sl~si~~~~gr~~~G~lsd~~g~k~~~~r~~~l~~~~~~~~ 274 (424)
+..+++.++.........+.++++.+++|.+..+. ..+...++..++.+..|++.||+|||+.+ ..+.++.+
T Consensus 16 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~dr~g~k~~l------~~~~~~~~ 89 (402)
T TIGR00897 16 LWGYIGVVVFMTGDGLEQGWLSPFLKALGLSPQQSASAFTLYGIAAAISAWISGVVAEIIGPLKTM------MIGLLLWC 89 (402)
T ss_pred hHHHHHHHHHHHhhhhHHHhHHHHHHHhCCCHHHhHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHH------HHHHHHHH
Confidence 33444444443333344556778888899987655 88899999999999999999999998755 44444444
Q ss_pred HHHHHH---Hh--chhHHHHHHHHHHHHHhhhhHhHHHHHHHHhhCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 014462 275 FALLYY---AI--GWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIASGIYDYY 349 (424)
Q Consensus 275 ~~~ll~---~~--~~~~~l~~~~~l~G~~~G~~~~~~~~~~se~fg~~~~g~~~g~~~~~~~lgs~l~~~~l~g~l~d~~ 349 (424)
++.+++ .. .+.+.+++..++.|++.+.......+.+.+.++++++|++.|+.+++..+|..+++|.+.|.+.+..
T Consensus 90 ~~~~~~~~~~~~~~~~~~l~~~~~i~G~g~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~g~~~~~~l~~~~ 169 (402)
T TIGR00897 90 VGHAAFIVFGLGHANYPLILLFYGIRGLGYPLFAYSFLVWVVYNTKQDNLSSAVGWFWAVYSIGIGVFGSYYSSYAIPAF 169 (402)
T ss_pred HHHHHHHHHhccCccHHHHHHHHHHHHcchHHHHhHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccc
Confidence 443322 22 3455667788888998888777777888899999999999999999999997444898888888776
Q ss_pred h
Q 014462 350 A 350 (424)
Q Consensus 350 ~ 350 (424)
+
T Consensus 170 g 170 (402)
T TIGR00897 170 G 170 (402)
T ss_pred c
Confidence 6
No 97
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.31 E-value=3.3e-10 Score=111.76 Aligned_cols=157 Identities=15% Similarity=0.093 Sum_probs=121.2
Q ss_pred HHHhhhhHHHHHHHHHHHHhhhhHHHHH-hcHHHHHHH-cCCCchhH--HHHHHHHHhhhhhhhhhhhhhhhhhcccCch
Q 014462 187 LPQALMKADFLLLFFSLVLASGSGLTVI-DNLGQICQS-LGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPR 262 (424)
Q Consensus 187 ~~~~l~~~~fwll~~~~~~~~~~~~~~~-~~l~~i~~~-~g~s~~~~--~~sl~si~~~~gr~~~G~lsd~~g~k~~~~r 262 (424)
+++.++++.+|.+....++......... +..|.+.++ +|.+..+. +.+..+++..++++..|++.||+++|+..
T Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~-- 280 (365)
T TIGR00900 203 IKFVLKNPLLRTLLLLALLFNLVFAPAIVALFPYVQSKYLGRGSTHYGWVLAAFGLGALLGALLLGLLGRYFKRMALM-- 280 (365)
T ss_pred HHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhchhHHH--
Confidence 3457788888887776666655555554 677888776 78876544 77788899999999999999999877533
Q ss_pred hHHHHHHHHHHHHHHHHHHh-c-hhHHHHHHHHHHHHHhhhhHhHHHHHHHHhhCcchhhHHHHHHHHHHHHHHHHHHHH
Q 014462 263 PVAMAVAQVVMAFALLYYAI-G-WPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGV 340 (424)
Q Consensus 263 ~~~l~~~~~~~~~~~ll~~~-~-~~~~l~~~~~l~G~~~G~~~~~~~~~~se~fg~~~~g~~~g~~~~~~~lgs~l~~~~ 340 (424)
..+..+.+++.+.+.. . +.+.+++..++.|++.+...+...+++.|.+|++++|+.+++.++...+|..+ ++.
T Consensus 281 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~-g~~ 355 (365)
T TIGR00900 281 ----TGAIFVIGLAILVVGLTPPNFPLFLVLWFAIGVGYGPINVPQGTLLQRRVPAELLGRVFGAQFSLSHAAWPL-GLI 355 (365)
T ss_pred ----HHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHH-HHH
Confidence 3334444444444332 2 24566778889999999999999999999999999999999999999999997 999
Q ss_pred HHHHHHhhhh
Q 014462 341 IASGIYDYYA 350 (424)
Q Consensus 341 l~g~l~d~~~ 350 (424)
+.|.++|+.|
T Consensus 356 ~~g~l~~~~g 365 (365)
T TIGR00900 356 LAGPLADHLG 365 (365)
T ss_pred HHHHHHHHcC
Confidence 9999998753
No 98
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=99.30 E-value=1.1e-10 Score=123.05 Aligned_cols=178 Identities=17% Similarity=0.113 Sum_probs=130.1
Q ss_pred hhhhHHHHHHHHHHHHhhhhHHHH----HhcHHHHHHHcCCCchh-HHHHHHHHHhhhhhhhhhhhhhhhhhcccCchhH
Q 014462 190 ALMKADFLLLFFSLVLASGSGLTV----IDNLGQICQSLGYADTS-IYVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPV 264 (424)
Q Consensus 190 ~l~~~~fwll~~~~~~~~~~~~~~----~~~l~~i~~~~g~s~~~-~~~sl~si~~~~gr~~~G~lsd~~g~k~~~~r~~ 264 (424)
-+++++++..+.++.+...+.+.. .+-++++.++.|-++.. ++.+...+.+.++.++.|.++|.+|||+..
T Consensus 36 ~~~s~~~i~~~~~~~~~~~~~~~~~~~~a~~l~~I~~diG~~~~~~w~~~~~~l~~av~~~~~G~LSDlfGRr~~~---- 111 (599)
T PF06609_consen 36 YYRSPRFIASFAAFSLAVIAAYFVLVLPASILPYINADIGGSDNWSWFSTAWTLASAVSFPFVGRLSDLFGRRYFF---- 111 (599)
T ss_pred ceeCHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHhcCCCccchHHHHHHHHHHHHHHHhhHHHHHHhcchHHH----
Confidence 456777777665544433322221 23468889999887654 488889999999999999999999998654
Q ss_pred HHHHHHHHHHHHHHHHHh-chhHHHHHHHHHHHHHhhhhHhHHHHHHHHhhCcchhhHHHHHHHHHHHHHHHHHHHHHHH
Q 014462 265 AMAVAQVVMAFALLYYAI-GWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIAS 343 (424)
Q Consensus 265 ~l~~~~~~~~~~~ll~~~-~~~~~l~~~~~l~G~~~G~~~~~~~~~~se~fg~~~~g~~~g~~~~~~~lgs~l~~~~l~g 343 (424)
.++.++..+|.+..+. .+...+..+.++.|++.|... +....++|+.|.|.|+..+.+.....-+...+ ||.++.
T Consensus 112 --i~g~~l~vvG~Iv~atA~~~~~~iag~~l~GvgaG~~~-~~~~~isEl~p~k~R~~~~~~~~~~~i~~~~~-~~~ia~ 187 (599)
T PF06609_consen 112 --IIGSLLGVVGSIVCATAQNMNTFIAGMVLYGVGAGVQE-LAALAISELVPNKWRGLGLAIASIPFIITTWI-SPLIAQ 187 (599)
T ss_pred --HHHHHHHHhHHHHhhcCCcHHHHHHHHHHHHHhhHHHH-HHHHHHHHhcccchhhhHhHHHHHHHHhhhcc-cHHHHH
Confidence 7888888888887774 556788889999999988876 45667999999999988887766544443333 555554
Q ss_pred HHHhhhhhhhhhhhhhccCCCCCcccCCCCCCcccCCcchHHHHHHHHHHHHHHHHHHHHHhhh
Q 014462 344 GIYDYYAEKQAGLLWKYNGNMLPVSFRDQETPTCLGSICYSITCGIMAGLCIIAMVMSLIVVHR 407 (424)
Q Consensus 344 ~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~g~~c~~~~f~i~a~~~~~~~~l~~~l~~~ 407 (424)
.+.... .|||.|++.+..+.+++++..++.++
T Consensus 188 ~~~~~~--------------------------------~WRw~~~~~~i~~~i~~vl~~~fY~P 219 (599)
T PF06609_consen 188 LFAAHS--------------------------------GWRWIFYIFIIWSGIALVLIFFFYFP 219 (599)
T ss_pred HhccCC--------------------------------CcchHHHHHHHHHHHHHHHHHHHhCC
Confidence 443322 29999999999988888776655543
No 99
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=99.30 E-value=1.5e-10 Score=118.25 Aligned_cols=154 Identities=12% Similarity=0.089 Sum_probs=107.3
Q ss_pred hhhHHHHHHHHHHHHhhhhHHHHHhcHHHHHHHc--CCCchhH--HHHHHHHHhhhhhhhhhhhhhhhhhcccCchhHHH
Q 014462 191 LMKADFLLLFFSLVLASGSGLTVIDNLGQICQSL--GYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAM 266 (424)
Q Consensus 191 l~~~~fwll~~~~~~~~~~~~~~~~~l~~i~~~~--g~s~~~~--~~sl~si~~~~gr~~~G~lsd~~g~k~~~~r~~~l 266 (424)
+.++.+|.....+++......++.+++|+++++. |++.... +.++..+++.+|++..|+++||+++|+.. .
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~~~~s~~~~~~~~~~~~l~~~~g~l~~g~l~dr~~~r~~~-----~ 313 (412)
T TIGR02332 239 IFTPAIMLYTLAYFCLTNTLSAINIWTPQILQSFNQGSSNIMIGLLAAIPQFCTIFGMIWWSRHSDRLKERKHH-----T 313 (412)
T ss_pred hcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHhHHHhhHHHHHHHHHHHHHHHHhcccCccHHH-----H
Confidence 3467899988888888888888889999999885 5554433 77888999999999999999999876432 1
Q ss_pred HHHHHHHHHHHHHHH-hchhHHHHHHHHHHHHHhhhhHhHHHHHHHHhhCcchhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 014462 267 AVAQVVMAFALLYYA-IGWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIASGI 345 (424)
Q Consensus 267 ~~~~~~~~~~~ll~~-~~~~~~l~~~~~l~G~~~G~~~~~~~~~~se~fg~~~~g~~~g~~~~~~~lgs~l~~~~l~g~l 345 (424)
....++.+++.++.. ..+....+....+.+++.....+.......|.+|++++|+++|+.+....+|+++ +|.+.|.+
T Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~a~g~~~~~~~~g~~~-~p~~~g~i 392 (412)
T TIGR02332 314 ALPYLFAAAGWLLASATDHNLIQLLGIIMASMGSFSAMAIFWTTPDQSISLQARAIAIAVINATGNIGSAL-SPFLIGIL 392 (412)
T ss_pred HHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhhhhhhHHHhhcccccchHHHHHHHHHHHHhhhhhhhh-hhhhcccc
Confidence 222223333322221 2222222222233333333333444555678899999999999999999999997 99999999
Q ss_pred Hhhhh
Q 014462 346 YDYYA 350 (424)
Q Consensus 346 ~d~~~ 350 (424)
.|..+
T Consensus 393 ~~~~g 397 (412)
T TIGR02332 393 KDATG 397 (412)
T ss_pred cccCC
Confidence 98876
No 100
>PRK12382 putative transporter; Provisional
Probab=99.30 E-value=9.1e-11 Score=118.42 Aligned_cols=153 Identities=13% Similarity=0.066 Sum_probs=115.0
Q ss_pred hhhHHHHHHHHHHHHhhhhHHHHHhcHHHH-HHHcCCCchhH--HHHHHHHHhhhhhhhhhhhhhhhhhcccCchhHHHH
Q 014462 191 LMKADFLLLFFSLVLASGSGLTVIDNLGQI-CQSLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMA 267 (424)
Q Consensus 191 l~~~~fwll~~~~~~~~~~~~~~~~~l~~i-~~~~g~s~~~~--~~sl~si~~~~gr~~~G~lsd~~g~k~~~~r~~~l~ 267 (424)
..+..+|.+++..++...........+|.+ .+++|.|..+. ..+...+...++++.+|+++||+|||+.+ .
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~l~~~lg~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~g~r~~l------~ 85 (392)
T PRK12382 12 SANFSLFRIAFAVFLTYMTVGLPLPVIPLFVHHDLGFGNTMVGIAVGIQFLATVLTRGYAGRLADQYGAKRSA------L 85 (392)
T ss_pred cccccHHHHHHHHHHHHHHHHHHhhhhhHHHHHhcCCcHHHHHHHHHHHHHHHHHHhhhhhHHHHhhcchHHH------H
Confidence 345566777666666655444455566765 46789987765 88999999999999999999999998755 3
Q ss_pred HHHHHHHHHHH---HHH------hchhHHHHHHHHHHHHHhhhhHhHHHHHHHHhhCcchhhHHHHHHHHHHHHHHHHHH
Q 014462 268 VAQVVMAFALL---YYA------IGWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFS 338 (424)
Q Consensus 268 ~~~~~~~~~~l---l~~------~~~~~~l~~~~~l~G~~~G~~~~~~~~~~se~fg~~~~g~~~g~~~~~~~lgs~l~~ 338 (424)
.+.+..+++.+ +.. ..+.+.+++..++.|++.+...+...+.+.+.+++|+|+++.++..++..+|..+ +
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~a~~~~~~~~~~g~~~-g 164 (392)
T PRK12382 86 QGMLACGLAGLAYLLAAILPVSAPFKFALLVVGRLILGFGESQLLTGALTWGLGLVGPKHSGKVMSWNGMAMYGALAA-G 164 (392)
T ss_pred HHHHHHHHHHHHHHhhhccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCccccchhhhHHHHHHHHHHHH-H
Confidence 33333322221 111 1234567888999999999888888889999999999999999999999988887 8
Q ss_pred HHHHHHHHhhhh
Q 014462 339 GVIASGIYDYYA 350 (424)
Q Consensus 339 ~~l~g~l~d~~~ 350 (424)
|.+++.+.+..+
T Consensus 165 ~~~~~~l~~~~g 176 (392)
T PRK12382 165 APLGLLLHSHFG 176 (392)
T ss_pred HHHHHHHHhccC
Confidence 999998887665
No 101
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=99.30 E-value=1.1e-10 Score=118.46 Aligned_cols=146 Identities=13% Similarity=0.144 Sum_probs=117.1
Q ss_pred HHHHHHHHHHhhhhH---HHHHhcHHHHHHHcCCCchhH--HHHHHHHHhhhhhhhhhhhhhhhhhcccCchhHHHHHHH
Q 014462 196 FLLLFFSLVLASGSG---LTVIDNLGQICQSLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQ 270 (424)
Q Consensus 196 fwll~~~~~~~~~~~---~~~~~~l~~i~~~~g~s~~~~--~~sl~si~~~~gr~~~G~lsd~~g~k~~~~r~~~l~~~~ 270 (424)
-|.+....+.+.... ......+|.+.+++|.|..+. .++...++..++.+..|+++||+|||+.+ ..+.
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~lp~i~~~~~~s~~~~g~~~s~~~~~~~l~~~~~g~l~dr~G~r~~l------~~~~ 81 (393)
T PRK09705 8 NFMLLVLVLIGLNMRPLLTSVGPLLPQLRQASGMSFSVAALLTALPVVTMGGLALAGSWLHQHVSERRSV------AISL 81 (393)
T ss_pred HHHHHHHHHHHHHcchhhhccchhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHhCchHHH------HHHH
Confidence 355555444443332 223346888899999987764 88899999999999999999999999866 6777
Q ss_pred HHHHHHHHHHH-hchhHHHHHHHHHHHHHhhhhHhHHHHHHHHhhCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 014462 271 VVMAFALLYYA-IGWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIASGIYDYY 349 (424)
Q Consensus 271 ~~~~~~~ll~~-~~~~~~l~~~~~l~G~~~G~~~~~~~~~~se~fg~~~~g~~~g~~~~~~~lgs~l~~~~l~g~l~d~~ 349 (424)
++.+++.+..+ ..+.+.+++..++.|++.|..++..+.++.+.|+ ++++.+.++...+..+|..+ ++.+.+.+.+..
T Consensus 82 ~l~~~~~~~~~~a~~~~~ll~~r~l~Gig~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~-g~~~~~~l~~~~ 159 (393)
T PRK09705 82 LLIAVGALMRELYPQSALLLSSALLGGVGIGIIQAVMPSVIKRRFQ-QRTPLVMGLWSAALMGGGGL-GAAITPWLVQHS 159 (393)
T ss_pred HHHHHHHHHHHHCcchHHHHHHHHHHHhHHHHHhhhhhHHHHHHcc-ccchhHHHHHHHHHHHHHHH-HHHHHHHHHHhc
Confidence 77777777766 4456778889999999999999999999999996 78999999999999999987 888888887765
No 102
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.29 E-value=9.1e-11 Score=121.36 Aligned_cols=192 Identities=12% Similarity=0.084 Sum_probs=141.7
Q ss_pred CCCCHHHhhhhHHHHHHHHHHHHhhhhHHHHHhcHHHHHHH-cCCCchhH--HHHHHHHHhhhhhhhhhhhhhhhhhccc
Q 014462 183 EDFTLPQALMKADFLLLFFSLVLASGSGLTVIDNLGQICQS-LGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFA 259 (424)
Q Consensus 183 ~~~t~~~~l~~~~fwll~~~~~~~~~~~~~~~~~l~~i~~~-~g~s~~~~--~~sl~si~~~~gr~~~G~lsd~~g~k~~ 259 (424)
...+++++++++.+|.++++.++.......+..++|.++++ +|++..+. +.++..+.+.+.++++|.++||+-+| .
T Consensus 247 ~~vP~~~i~ts~~vwai~~~~f~~~~~~~~l~~y~PtY~~~VL~f~v~~~G~~salP~l~~~~~k~~~g~lsD~l~~~-~ 325 (466)
T KOG2532|consen 247 PPVPYKAILTSPPVWAIWISAFGGNWGFYLLLTYLPTYLKEVLGFDVRETGFLSALPFLAMAIVKFVAGQLSDRLTFR-I 325 (466)
T ss_pred CCCCHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhc-c
Confidence 46789999999999999999999999999999999999987 89986554 88899999999999999999999876 3
Q ss_pred C----chhHHHHHHHHHHHHHHHHHHhch--hHHHHHHHHHHHHHhhhhHhHHHHHHHHhhCcchhhHHHHHHHHHHHHH
Q 014462 260 Y----PRPVAMAVAQVVMAFALLYYAIGW--PGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAG 333 (424)
Q Consensus 260 ~----~r~~~l~~~~~~~~~~~ll~~~~~--~~~l~~~~~l~G~~~G~~~~~~~~~~se~fg~~~~g~~~g~~~~~~~lg 333 (424)
+ -|+++-.++....++.++.+...+ ...+.+.....+.+..+....-.........+++-+...|+.+....++
T Consensus 326 ls~t~~rkifn~i~~~~~ai~l~~l~~~~~~~~~~a~~~l~~~~~~~g~~~~Gf~~~~~~~apq~a~~l~g~~~~~~~~~ 405 (466)
T KOG2532|consen 326 LSETTVRKIFNTIAFGGPAVFLLVLAFTSDEHRLLAVILLTIAIGLSGFNISGFYKNHQDIAPQHAGFVMGIINFVGALA 405 (466)
T ss_pred CchHhHHHHHHhHHHHHHHHHHHeeeecCCCcchHHHHHHHHHHHHcccchhhhHhhhhhccchHHHHHHHHHHHHHHHH
Confidence 3 366777777777777766655332 2212222222223322222222222222225788999999999999999
Q ss_pred HHHHHHHHHHHHHhhhhhhhhhhhhhccCCCCCcccCCCCCCcccCCcchHHHHHHHHHHHHHHHHHHHHHh
Q 014462 334 SLIFSGVIASGIYDYYAEKQAGLLWKYNGNMLPVSFRDQETPTCLGSICYSITCGIMAGLCIIAMVMSLIVV 405 (424)
Q Consensus 334 s~l~~~~l~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~g~~c~~~~f~i~a~~~~~~~~l~~~l~ 405 (424)
+++ +|.+.|.+.... ++. -|+.+|++.+++.+++.+.-.++.
T Consensus 406 ~~~-~P~~vg~~~~~~-t~~----------------------------eW~~VF~i~a~i~~~~~i~f~~f~ 447 (466)
T KOG2532|consen 406 GFI-APLLVGIIVTDN-TRE----------------------------EWRIVFLIAAGILIVGNIIFLFFG 447 (466)
T ss_pred HHH-HHHheeeEeCCC-CHH----------------------------HHHHHHHHHHHHHHHhchheeEee
Confidence 997 899999877421 221 199999999999999886655554
No 103
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.29 E-value=1.4e-09 Score=110.20 Aligned_cols=159 Identities=16% Similarity=0.132 Sum_probs=113.0
Q ss_pred hhhhHHHHHhcHHHHHHH-cCCCchhH--HHHHHHHHhhhhhhhhhhhhhhhhhcccCchhHHHHHHHHHHHHHHHHHH-
Q 014462 206 ASGSGLTVIDNLGQICQS-LGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVMAFALLYYA- 281 (424)
Q Consensus 206 ~~~~~~~~~~~l~~i~~~-~g~s~~~~--~~sl~si~~~~gr~~~G~lsd~~g~k~~~~r~~~l~~~~~~~~~~~ll~~- 281 (424)
..+....+..++|.+.++ +|++.... +.+...+...+++++.|+++||+++|+.. ..+.....+....+.
T Consensus 228 ~~~~~~~~~~~~p~~l~~~~~~~~~~~g~~~~~~~~~~i~~~~~~G~l~dr~g~~~~~------~~~~~~~~~~~~~~~~ 301 (393)
T PRK15011 228 MWGTNSLYIINMPLFIINELHLPEKLAGVMMGTAAGLEIPTMLIAGYFAKRLGKRFLM------RVAAVAGVCFYAGMLM 301 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHH------HHHHHHHHHHHHHHHH
Confidence 333444455678887754 78887644 55666677788999999999999988633 222222222222222
Q ss_pred hchhHHHHHHHHHHHHHhhhhHhHHHHHHHHhhCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhcc
Q 014462 282 IGWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIASGIYDYYAEKQAGLLWKYN 361 (424)
Q Consensus 282 ~~~~~~l~~~~~l~G~~~G~~~~~~~~~~se~fg~~~~g~~~g~~~~~~~lgs~l~~~~l~g~l~d~~~~~~~~~~~~~~ 361 (424)
..+++.+.+..++.+++.|...+..+....|.+|. ++|++.++.+....+|+.+ ++.+.|.++|..+
T Consensus 302 ~~~~~~~l~~~~l~~~~~g~~~~~~~~~~~~~~p~-~~g~~~~~~~~~~~lg~~~-g~~l~G~i~~~~g----------- 368 (393)
T PRK15011 302 AHSPAILLGLQLLNAIYIGILGGIGMLYFQDLMPG-QAGSATTLYTNTSRVGWII-AGSLAGIVAEIWN----------- 368 (393)
T ss_pred HhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC-CcchHHHHHHHHHHHHHHH-HHHHHHHHHHHhh-----------
Confidence 23444555566677777887777778888999975 5899999999889999997 9999999999776
Q ss_pred CCCCCcccCCCCCCcccCCcchHHHHHHHHHHHHHHHHHHHHH
Q 014462 362 GNMLPVSFRDQETPTCLGSICYSITCGIMAGLCIIAMVMSLIV 404 (424)
Q Consensus 362 ~~~~~~~~~~~~~~~c~g~~c~~~~f~i~a~~~~~~~~l~~~l 404 (424)
|+..|.+.++++++++++.+..
T Consensus 369 ---------------------~~~~~~~~~~~~~~~~~~~~~~ 390 (393)
T PRK15011 369 ---------------------YHAVFWFALVMIIATLFCLLRI 390 (393)
T ss_pred ---------------------hHHHHHHHHHHHHHHHHHHHhh
Confidence 9999998888887776665543
No 104
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=99.29 E-value=4.9e-10 Score=118.26 Aligned_cols=241 Identities=13% Similarity=0.026 Sum_probs=157.1
Q ss_pred HHHHHHHHHHHHhhcccCCCCccc----------CCCCchhHHHHHHHHHHHHHHHHHHHhhc-ccccchHHHHHHHHHH
Q 014462 15 VGPSIVVMAFMFIVRPIGGHRQVR----------LSDNTSFLFTYTVCLILAAYMLAVLLLED-LEVANQNVLTVLAVGL 83 (424)
Q Consensus 15 ~~p~~v~~~~~~~~r~~~~~~~~~----------~~~~~~f~~~~~~~~~l~~~l~~~~~~~~-~~~~s~~~~~~~~~v~ 83 (424)
....+..++..++.+|+++.+.+. +.|+.|..+ ++.+++.||+..+..+. +.+|+++..++..+++
T Consensus 204 i~~~i~~vl~~~fY~PP~~~~~~~~~~s~~~~l~~lD~IG~~L---~~~Gl~LfLlgl~wgG~~~~~W~Sa~VIa~lviG 280 (599)
T PF06609_consen 204 IWSGIALVLIFFFYFPPPRAQLHGRKLSKREQLKELDWIGIFL---FIAGLALFLLGLSWGGYPYYPWKSAHVIAPLVIG 280 (599)
T ss_pred HHHHHHHHHHHHHhCCCchhhhccccCcHHHHHHHhhHHHHHH---HHHHHHHHHHHHhccCCCCCCCCCccchhhHHHH
Confidence 333333445566777776432211 345555555 78899999999998776 4689998888888888
Q ss_pred HHHHHhhhhHhhhhhccCCCCCC--ccchhhcccccCcCCCcchhhhHhhhhcccCCCCCCCCCCChhhHHHHHHHHHHH
Q 014462 84 IIIILLPVTIPVVLVFFTEPPPP--VEETLLAETNKGEASKSEDYQEEVILSEVEDEKPPEVDSLPASERQKRIAHLQAK 161 (424)
Q Consensus 84 ~~ll~~Pl~i~~~~~~~~~~~~~--~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (424)
+++|.+. .-+|.. .++|++|.+
T Consensus 281 ~~~Lv~F----------~~wE~~~~~~~Pl~P~~---------------------------------------------- 304 (599)
T PF06609_consen 281 FVLLVAF----------VVWEWFGAPKDPLFPHR---------------------------------------------- 304 (599)
T ss_pred HHHHHHH----------HHhhhhccCCCCcCCHH----------------------------------------------
Confidence 8877662 112221 123432221
Q ss_pred HHHHhhhhhHHHhhhcCCCCCCCCCHHHhhhh-HHHHHHHHHHHHhhhhHHHHHhcHHHHHHH-cCCCch-----hHHHH
Q 014462 162 LFQAAAEGAVRVKRRKGPRRGEDFTLPQALMK-ADFLLLFFSLVLASGSGLTVIDNLGQICQS-LGYADT-----SIYVS 234 (424)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~t~~~~l~~-~~fwll~~~~~~~~~~~~~~~~~l~~i~~~-~g~s~~-----~~~~s 234 (424)
++++ +.|+...+..|+.....+...+..|+.... ++-+.. .....
T Consensus 305 ----------------------------Lf~~~r~~~~~lvi~fi~G~~~~s~~~l~p~~~~~vf~~d~~~~~~~~~~s~ 356 (599)
T PF06609_consen 305 ----------------------------LFKDRRGFAALLVISFISGMNFFSVNILWPQQVVNVFGSDPISITEIGWISS 356 (599)
T ss_pred ----------------------------HhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCcccceeehhhh
Confidence 6665 456666666665555556666677777655 454432 23566
Q ss_pred HHHHHhhhhhhhhhhhhhhhhhcccCchhHHHHHHHHHHHHHHHHHH---hchhHHHHHHHHHHHHHhhhhHhHHHHHHH
Q 014462 235 MISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVMAFALLYYA---IGWPGEIYVTTVLVGLSYGAHWAIVPAAAS 311 (424)
Q Consensus 235 l~si~~~~gr~~~G~lsd~~g~k~~~~r~~~l~~~~~~~~~~~ll~~---~~~~~~l~~~~~l~G~~~G~~~~~~~~~~s 311 (424)
..+++..+|.++.|.+.-+++|-|. .+.++.+++.+++-+++ ..+....+...++.|++.|....+....+.
T Consensus 357 ~~~fg~~~g~~i~g~l~~~ir~~Kw-----~li~~~~~~ta~~Gama~~~~~n~~~~i~~~~l~g~giG~~~~~~~~~~q 431 (599)
T PF06609_consen 357 PVGFGSCAGAVILGLLFSKIRHIKW-----QLIFGSVLMTAFCGAMAAVRPDNKNAAIAFLVLAGFGIGGILVPAIVIAQ 431 (599)
T ss_pred hHHHHHHHHHHHHHHHHHHccchhH-----HHHHHHHHHHHHHHHHHHccCCCcchHHHHHHHHHHhHHHHHHHHHHeeE
Confidence 7788888999999998877754332 23344444443322333 233445567788999999988878877777
Q ss_pred HhhCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 014462 312 ELFGLKSFGALYNFLTLASPAGSLIFSGVIASGIYDY 348 (424)
Q Consensus 312 e~fg~~~~g~~~g~~~~~~~lgs~l~~~~l~g~l~d~ 348 (424)
-..|.++.|++.++......+|+.+ +..++..++..
T Consensus 432 l~~p~~~ig~a~gL~~s~R~~GGsI-g~aIy~~I~~n 467 (599)
T PF06609_consen 432 LIVPDEDIGTATGLTGSIRSIGGSI-GYAIYNAIFTN 467 (599)
T ss_pred eeeCchHHHHHHHHHHHHHHHhhHH-HHHHHHHHHHh
Confidence 7888999999999999999999998 77777765543
No 105
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.28 E-value=2.9e-10 Score=114.65 Aligned_cols=158 Identities=11% Similarity=-0.003 Sum_probs=120.2
Q ss_pred CCHHHhhhhHHHHHHHHHHHHhhhhHHHHHhcHHHHHHHcCCCchhH--HHHHHHHHhhhhhhhhhhhhhhhhhcccCch
Q 014462 185 FTLPQALMKADFLLLFFSLVLASGSGLTVIDNLGQICQSLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPR 262 (424)
Q Consensus 185 ~t~~~~l~~~~fwll~~~~~~~~~~~~~~~~~l~~i~~~~g~s~~~~--~~sl~si~~~~gr~~~G~lsd~~g~k~~~~r 262 (424)
.++++.++++.+|.+.+..++.......+.+.++.+.++.|++.... +.++..+...++++..|++.||+++|+.+
T Consensus 196 ~~~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~l-- 273 (382)
T PRK11128 196 PAWKALLKEPTVWRFLLCVSLLQGSHAAYYGFSAIYWQAAGYSASTIGYLWSLGVVAEVLIFAFSNRLFRRWSARDLL-- 273 (382)
T ss_pred chHHHHHcChhHHHHHHHHHHHHHHhHhHHHHHHHHHHHCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH--
Confidence 46788999999998877766665555556667788888889886543 66677788888899999999999887644
Q ss_pred hHHHHHHHHHHHHHHHHHH-hchhHHHHHHHHHHHHHhhhhHhHHHHHHHHhhCcchhhHHHHHHH-HHHHHHHHHHHHH
Q 014462 263 PVAMAVAQVVMAFALLYYA-IGWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLT-LASPAGSLIFSGV 340 (424)
Q Consensus 263 ~~~l~~~~~~~~~~~ll~~-~~~~~~l~~~~~l~G~~~G~~~~~~~~~~se~fg~~~~g~~~g~~~-~~~~lgs~l~~~~ 340 (424)
.++.++++++.+++. ..+++.+++..++.|++++...+....++.+. +.+++++.+++.+ ....+|..+ ||.
T Consensus 274 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~i-g~~ 347 (382)
T PRK11128 274 ----LLSAICGVVRWGLMGSTTALPWLIVIQILHCGTFTVCHLAAMRYIAAR-PGSEVIRLQALYSALAMGGSIAI-MTV 347 (382)
T ss_pred ----HHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-CHhhhHHHHHHHHHHHHHHHHHH-HHH
Confidence 455555555555444 34556677788899999998888888888887 4666788899876 455667676 999
Q ss_pred HHHHHHhhhh
Q 014462 341 IASGIYDYYA 350 (424)
Q Consensus 341 l~g~l~d~~~ 350 (424)
++|.++|+.+
T Consensus 348 i~G~l~~~~g 357 (382)
T PRK11128 348 LSGFLYQHLG 357 (382)
T ss_pred HHHHHHHhcc
Confidence 9999999876
No 106
>PRK12307 putative sialic acid transporter; Provisional
Probab=99.28 E-value=1.1e-09 Score=111.61 Aligned_cols=158 Identities=14% Similarity=0.153 Sum_probs=108.2
Q ss_pred CHHHhhhhHHHHHHHHH---HHHhhhhHHHHHhcHHHHHHHcCCCchhH--HHHHHHHHhhhhhhhhhhhhhhhhhcccC
Q 014462 186 TLPQALMKADFLLLFFS---LVLASGSGLTVIDNLGQICQSLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAY 260 (424)
Q Consensus 186 t~~~~l~~~~fwll~~~---~~~~~~~~~~~~~~l~~i~~~~g~s~~~~--~~sl~si~~~~gr~~~G~lsd~~g~k~~~ 260 (424)
++++.++++.+|..... .++..+....+..++|.+.++.|++.... +.++..+++.+|++.+|+++||++||+..
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~ 299 (426)
T PRK12307 220 SMKGLFNRAQFPLTLCVFIVLFSIFGANWPIFGLLPTYLAGEGFDTGVVSNLMTAAAFGTVLGNIVWGLCADRIGLKKTF 299 (426)
T ss_pred HHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHH
Confidence 35567788877754432 22333333445678899998888876543 67788899999999999999999987543
Q ss_pred chhHHHHHHHHHHHHHHHHHH-hchhHHHHHHHHHHHHH--hhhhHhHHHHHHHHhhCcchhhHHHHHHHHHHHHHHHHH
Q 014462 261 PRPVAMAVAQVVMAFALLYYA-IGWPGEIYVTTVLVGLS--YGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIF 337 (424)
Q Consensus 261 ~r~~~l~~~~~~~~~~~ll~~-~~~~~~l~~~~~l~G~~--~G~~~~~~~~~~se~fg~~~~g~~~g~~~~~~~lgs~l~ 337 (424)
..+.++.++..+.+. ........+..++.|++ ..+..+..+..+.|.+|++++|++.|+.+....+|+.+
T Consensus 300 ------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~~~~~- 372 (426)
T PRK12307 300 ------SIGLLMSFLFIFPLFRIPQDNYLLLGACLFGLMATNVGVGGLVPKFLYDYFPLEVRGLGTGLIYNLAATSGTF- 372 (426)
T ss_pred ------HHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHhcccHhHHHHHHHHHhCcHHHHhhhhhHHHHHHhHHHHH-
Confidence 333333333333222 22112222333344443 23445667788999999999999999999999999987
Q ss_pred HHHHHHHHHhhhh
Q 014462 338 SGVIASGIYDYYA 350 (424)
Q Consensus 338 ~~~l~g~l~d~~~ 350 (424)
+|.+.|++.|..+
T Consensus 373 gp~~~g~l~~~~g 385 (426)
T PRK12307 373 NSMAATWLGITMG 385 (426)
T ss_pred HHHHHHHHHHccc
Confidence 9999999998876
No 107
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=99.28 E-value=1.2e-10 Score=115.92 Aligned_cols=159 Identities=12% Similarity=0.030 Sum_probs=118.1
Q ss_pred CHHHhhhhHHHHHHHHHHHHhhhhHHHHHhcHHHHHHHcCCCchhH--HHHHHHHHhhhhhhhhhhhhhhhhhcccCchh
Q 014462 186 TLPQALMKADFLLLFFSLVLASGSGLTVIDNLGQICQSLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRP 263 (424)
Q Consensus 186 t~~~~l~~~~fwll~~~~~~~~~~~~~~~~~l~~i~~~~g~s~~~~--~~sl~si~~~~gr~~~G~lsd~~g~k~~~~r~ 263 (424)
+.++.++++.+|.+.+..++.......+..++|++.++.|++.... +.++..++..++++..|++.||+++|+..
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~g~~~~~~g~~~~~~~~~~i~~~~~~g~l~dr~~~~~~~--- 265 (355)
T TIGR00896 189 TPVRIWRSPLAWQVTVFFGLQSGLYYSLIGWLPAILISHGASAATAGSLLALMQLAQAASALLIPALARRVKDQRGI--- 265 (355)
T ss_pred CCchhhcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHH---
Confidence 4567889999998877776666666777788999999899887554 88889999999999999999999654322
Q ss_pred HHHHHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHhhhhHhHHHHHHHHhhC-cchhhHHHHHHHHHHHHHHHHHHHHHH
Q 014462 264 VAMAVAQVVMAFALLYYAIGWPGEIYVTTVLVGLSYGAHWAIVPAAASELFG-LKSFGALYNFLTLASPAGSLIFSGVIA 342 (424)
Q Consensus 264 ~~l~~~~~~~~~~~ll~~~~~~~~l~~~~~l~G~~~G~~~~~~~~~~se~fg-~~~~g~~~g~~~~~~~lgs~l~~~~l~ 342 (424)
+.++.++++++.+.+............++.|++.|..++...+.+.+..+ .++.|..+++.+....+++.+ +|.+.
T Consensus 266 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~-gp~~~ 342 (355)
T TIGR00896 266 --VAVLAVLQLVGLCGLLFAPMHGLWAWALVLGLGQGGAFPLALTLIGLRSRQAAQAAALSAMAQSIGYLLAAL-GPLFV 342 (355)
T ss_pred --HHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhHhHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHH-HHHHH
Confidence 13344444444443332221122235678899999998887777766654 456799999988888888887 99999
Q ss_pred HHHHhhhh
Q 014462 343 SGIYDYYA 350 (424)
Q Consensus 343 g~l~d~~~ 350 (424)
|.+.|..+
T Consensus 343 G~l~~~~g 350 (355)
T TIGR00896 343 GVLHDISG 350 (355)
T ss_pred HHHHHHhc
Confidence 99999877
No 108
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=99.28 E-value=1.3e-09 Score=111.44 Aligned_cols=157 Identities=15% Similarity=0.153 Sum_probs=113.1
Q ss_pred HHHhhhhHHHHHHHHHHHHhhhhHHHHHhcHHHHHHH-cCCCch-hHHHHHHHHHhhhhhhhhhhhhhhhhhcccCchhH
Q 014462 187 LPQALMKADFLLLFFSLVLASGSGLTVIDNLGQICQS-LGYADT-SIYVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPV 264 (424)
Q Consensus 187 ~~~~l~~~~fwll~~~~~~~~~~~~~~~~~l~~i~~~-~g~s~~-~~~~sl~si~~~~gr~~~G~lsd~~g~k~~~~r~~ 264 (424)
+++.++++.+|.+.+..++............+.+.+. +|.+.. ..+.++..++..++.+++|+++||+++|+.+
T Consensus 215 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~g~~~~~---- 290 (437)
T TIGR00792 215 FKALFKNDQLLILCLAYLFYNLAFNIKNGVQVYYFTYVLGDPELFSYMGSIAIVAGLIGVLLFPRLVKKFGRKILF---- 290 (437)
T ss_pred HHHHhCCHHHHHHHHHHHHHHHHHHHHcchhheeEeeecCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHH----
Confidence 4457889999988777766655544443334444443 342222 2366677899999999999999999987644
Q ss_pred HHHHHHHHHHHHHHHHHh--chhHHHHHHHHHHHHHhhhhHhHHHHHHHHhhC-------cchhhHHHHHHHHHHHHHHH
Q 014462 265 AMAVAQVVMAFALLYYAI--GWPGEIYVTTVLVGLSYGAHWAIVPAAASELFG-------LKSFGALYNFLTLASPAGSL 335 (424)
Q Consensus 265 ~l~~~~~~~~~~~ll~~~--~~~~~l~~~~~l~G~~~G~~~~~~~~~~se~fg-------~~~~g~~~g~~~~~~~lgs~ 335 (424)
.++.++.+++.+++.. .+...+++..++.|++.|..++..+++++|..+ .++.|..+++.++...+|+.
T Consensus 291 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~g~~ 368 (437)
T TIGR00792 291 --AGGILLMVLGYLIFFFAGSNLPLILVLIILAGFGQNFVTGLVWALVADTVDYGEWKTGVRAEGLVYSVRTFVRKLGQA 368 (437)
T ss_pred --HHHHHHHHHHHHHHHHcchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhcCccchHHHHHHHHHHHHHHHH
Confidence 4445555555444432 234455667788899999999889999888754 56789999999999999999
Q ss_pred HHHHHHHHHHHhhhh
Q 014462 336 IFSGVIASGIYDYYA 350 (424)
Q Consensus 336 l~~~~l~g~l~d~~~ 350 (424)
+ ++.+.|.+.|..|
T Consensus 369 l-g~~i~g~ll~~~G 382 (437)
T TIGR00792 369 L-AGFLVGLILGIIG 382 (437)
T ss_pred H-HHHHHHHHHHHcC
Confidence 7 9999999998766
No 109
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=99.28 E-value=2e-10 Score=112.98 Aligned_cols=153 Identities=13% Similarity=0.096 Sum_probs=116.8
Q ss_pred HhhhhHHHHHHHHHHHHhhhhHHHHHhcHHHHHHH---cCCCchhH--HHHHHHHHhhhhhhhhhhhhhhhhhcccCchh
Q 014462 189 QALMKADFLLLFFSLVLASGSGLTVIDNLGQICQS---LGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRP 263 (424)
Q Consensus 189 ~~l~~~~fwll~~~~~~~~~~~~~~~~~l~~i~~~---~g~s~~~~--~~sl~si~~~~gr~~~G~lsd~~g~k~~~~r~ 263 (424)
+.++++.+|+..+..|+..+...++.+|++.++.+ +|+++... ..+.+..+..+||++.+++.||+++|+.+
T Consensus 135 ~~~~~~~~~l~~~~~f~yvg~e~~~~~w~~~yl~~~~~~g~s~~~a~~~~s~~~~~~~iGr~~~~~l~~r~g~~~~l--- 211 (310)
T TIGR01272 135 SAFQFTHLVLGALGIFVYVGAEVSAGSFLVNFLSDPHALGLPEDQAAHFTAYTWGGAMVGRFIGSAVMPMISQGRYL--- 211 (310)
T ss_pred hHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHH---
Confidence 46788999999999999998999999999999975 47776543 88899999999999999999999977643
Q ss_pred HHHHHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHhhhhHhHHHHHHHHhhCcchhhHHHHHHHHHHHHHHHHHHHHHHH
Q 014462 264 VAMAVAQVVMAFALLYYAIGWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIAS 343 (424)
Q Consensus 264 ~~l~~~~~~~~~~~ll~~~~~~~~l~~~~~l~G~~~G~~~~~~~~~~se~fg~~~~g~~~g~~~~~~~lgs~l~~~~l~g 343 (424)
.++.++.+++.+++...+........++.|++.+..++...+...+.+|. +.+.+.++. ....+|+.+ .|.+.|
T Consensus 212 ---~~~~~l~~~~~~l~~~~~~~~~~~~~~l~g~~~s~i~P~~~s~a~~~~~~-~~~~asai~-~~~~~Gg~i-~P~l~G 285 (310)
T TIGR01272 212 ---AFNAFLAVLLSIGAALTHGYVAMWFVLALGLFNSIMFPTIFSLALNALGR-HTSQGSGIL-CLAIVGGAI-VPLLQG 285 (310)
T ss_pred ---HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhh-hhhhhHHHH-HHHHhcchH-HHHHHH
Confidence 33333333333333322222223466688999999999999999999964 456777775 566789987 799999
Q ss_pred HHHhhhh
Q 014462 344 GIYDYYA 350 (424)
Q Consensus 344 ~l~d~~~ 350 (424)
.+.|..+
T Consensus 286 ~lad~~g 292 (310)
T TIGR01272 286 SLADCLG 292 (310)
T ss_pred HHHHhcc
Confidence 9999877
No 110
>TIGR00895 2A0115 benzoate transport.
Probab=99.27 E-value=2.3e-10 Score=114.26 Aligned_cols=145 Identities=12% Similarity=0.108 Sum_probs=108.3
Q ss_pred HHHHHHHHHHHHhhhhHHHHHhcHHHHHHHcCCCchhH--HHHHHHHHhhhhhhhhhhhhhhhhhcccCchhHHHHHHHH
Q 014462 194 ADFLLLFFSLVLASGSGLTVIDNLGQICQSLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQV 271 (424)
Q Consensus 194 ~~fwll~~~~~~~~~~~~~~~~~l~~i~~~~g~s~~~~--~~sl~si~~~~gr~~~G~lsd~~g~k~~~~r~~~l~~~~~ 271 (424)
+.++.++...++..........++|.+.++.|++.... +.++..++..+|++++|+++||+++|+ . . ....+
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~----~-~~~~~ 323 (398)
T TIGR00895 250 RITVLLWLLYFMLLVGVYFLTNWLPKLMVELGFSLSLAATGGALFNFGGVIGSIIFGWLADRLGPRV-T----A-LLLLL 323 (398)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchHH-H----H-HHHHH
Confidence 34455555555555555566677887778889886543 778889999999999999999998762 2 1 22222
Q ss_pred HHHHHHHHHH-hchhHHHHHHHHHHHHHhhhhHhHHHHHHHHhhCcchhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 014462 272 VMAFALLYYA-IGWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIASGI 345 (424)
Q Consensus 272 ~~~~~~ll~~-~~~~~~l~~~~~l~G~~~G~~~~~~~~~~se~fg~~~~g~~~g~~~~~~~lgs~l~~~~l~g~l 345 (424)
......++.. ..+...+++..++.|++.+...+...+++.|.+|.+++|+.+|+.+....+|+.+ +|.+.|.+
T Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~-g~~~~G~l 397 (398)
T TIGR00895 324 GAVFAVLVGSTLFSPTLLLLLGAIAGFFVNGGQSGLYALMALFYPTAIRATGVGWAIGIGRLGAII-GPILAGYL 397 (398)
T ss_pred HHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHH-HHHhHHhc
Confidence 2222222222 3445566778889999999999999999999999999999999999999999997 99999875
No 111
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.26 E-value=2.1e-10 Score=115.88 Aligned_cols=150 Identities=13% Similarity=0.080 Sum_probs=110.5
Q ss_pred HHHHHHHHHHHHhhhhHHHHHhcHHHH-HHHcCCCchhH--HHHHHHHHhhhhhhhhhhhhhhhhhcccCchhHHHHHHH
Q 014462 194 ADFLLLFFSLVLASGSGLTVIDNLGQI-CQSLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQ 270 (424)
Q Consensus 194 ~~fwll~~~~~~~~~~~~~~~~~l~~i-~~~~g~s~~~~--~~sl~si~~~~gr~~~G~lsd~~g~k~~~~r~~~l~~~~ 270 (424)
+++..+.+..+....+.......+|.+ .+++|.+..+. ..+...++.+++.+..|+++||+|||+.+ ..+.
T Consensus 15 ~~~~~l~~~~~~~~~~~~~~~~~l~~~i~~~~g~s~~~~g~~~~~~~~~~~i~~~~~G~l~Dr~g~r~~l------~~~~ 88 (399)
T PRK05122 15 LRIVSIVMFTFISYLTIGLPLAVLPGYVHDQLGFSAFLAGLVISLQYLATLLSRPHAGRYADTLGPKKAV------VFGL 88 (399)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHhchhhHhHHhccCCcchH------HHHH
Confidence 344445444444444444444566764 46689887654 88899999999999999999999999866 4444
Q ss_pred HHHHHHHHHHH---hc------hhHHHHHHHHHHHHHhhhhHhHHHHHHHHhhCcchhhHHHHHHHHHHHHHHHHHHHHH
Q 014462 271 VVMAFALLYYA---IG------WPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVI 341 (424)
Q Consensus 271 ~~~~~~~ll~~---~~------~~~~l~~~~~l~G~~~G~~~~~~~~~~se~fg~~~~g~~~g~~~~~~~lgs~l~~~~l 341 (424)
++.+++.+.+. .. +...+++..++.|++.+...+.....+.+.++.++|+++.++...+..+|..+ ++.+
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~-g~~l 167 (399)
T PRK05122 89 CGCALSGLLYLLAGLLAAWPVLSLLLLLLGRLLLGIGESLAGTGSILWGIGRVGALHTGRVISWNGIATYGALAI-GAPL 167 (399)
T ss_pred HHHHHHHHHHHHhhhhhccchhHHHHHHHHHHHHHhhHHhhcchHHHHHHhhcChhhhccchhhhhhhhhHHHHH-HHHH
Confidence 44433322211 11 23356778899999999998888889999999999999999988888888886 8999
Q ss_pred HHHHHhhhh
Q 014462 342 ASGIYDYYA 350 (424)
Q Consensus 342 ~g~l~d~~~ 350 (424)
++.+.+..+
T Consensus 168 ~~~l~~~~g 176 (399)
T PRK05122 168 GVLLYHWGG 176 (399)
T ss_pred HHHHHHccc
Confidence 998887665
No 112
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=99.26 E-value=6e-10 Score=111.81 Aligned_cols=134 Identities=16% Similarity=0.231 Sum_probs=100.4
Q ss_pred HHHHHhcHHHHHH-HcCCCchhH--HHHHHHHHhhhhhhhhhhhhhhhhhcccCchhHHHHHHHHHHHHHHH-HHHh-ch
Q 014462 210 GLTVIDNLGQICQ-SLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVMAFALL-YYAI-GW 284 (424)
Q Consensus 210 ~~~~~~~l~~i~~-~~g~s~~~~--~~sl~si~~~~gr~~~G~lsd~~g~k~~~~r~~~l~~~~~~~~~~~l-l~~~-~~ 284 (424)
......++|.+.+ ++|++..+. +.+...++..+|+++.|+++||+++|+.+ .++.++..+..+ ++.. .+
T Consensus 254 ~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~------~~~~~~~~~~~~~~~~~~~~ 327 (405)
T TIGR00891 254 SHPIQDLLPTYLKADLGLSPHTVANIVVFSNIGAIVGGCVFGFLGDWLGRRKAY------VCSLLAGQLLIIPVFAIGAN 327 (405)
T ss_pred HhhhhhhhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchhhh------HHHHHHHHHHHHHHHHhCCc
Confidence 3345566787775 478887654 77888999999999999999999988654 233222212211 2222 23
Q ss_pred hHHHHHHHHHHHHHhhhhHhHHHHHHHHhhCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh
Q 014462 285 PGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIASGIYDYYA 350 (424)
Q Consensus 285 ~~~l~~~~~l~G~~~G~~~~~~~~~~se~fg~~~~g~~~g~~~~~~~lgs~l~~~~l~g~l~d~~~ 350 (424)
.+.+.+..++.|++.+..+++.++.+.|.+|.+++|+..|+.+....+|+.+ +|.+.|.+.|+.|
T Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~-g~~~~g~l~~~~g 392 (405)
T TIGR00891 328 VAVLGLGLFFQQMLVQGIWGILPKHLGEYFPTDQRAAGLGFTYQLGNLGGAL-APIIGALLAQRLD 392 (405)
T ss_pred hHHHHHHHHHHHHHHccchhhHHHHHhhhCCcchhHHHhhHHHHHHHHHHHH-HHHHHHHHHHhcc
Confidence 3344555567777777788888999999999999999999999999999997 9999999999877
No 113
>PRK10091 MFS transport protein AraJ; Provisional
Probab=99.26 E-value=2.2e-09 Score=108.32 Aligned_cols=176 Identities=18% Similarity=0.116 Sum_probs=115.2
Q ss_pred hhhhHHHHHHHHHHHHhhhhHHHHHhcHHHHHH-HcCCCchhH--HHHHHHHHhhhhhhhhhhhhhhhhhcccCchhHHH
Q 014462 190 ALMKADFLLLFFSLVLASGSGLTVIDNLGQICQ-SLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAM 266 (424)
Q Consensus 190 ~l~~~~fwll~~~~~~~~~~~~~~~~~l~~i~~-~~g~s~~~~--~~sl~si~~~~gr~~~G~lsd~~g~k~~~~r~~~l 266 (424)
.++++++|..+...+++.........+++.+.+ ..|++.... +.++.++++.+|+++.|++.||+++|+..
T Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~~r~~~~~~~------ 268 (382)
T PRK10091 195 FLRSPAPWLIFAATMFGNAGVFAWFSYIKPYMMFISGFSETSMTFIMMLVGLGMVLGNLLSGRLSGRYSPLRIA------ 268 (382)
T ss_pred HhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHhHHHheeccccCchhHH------
Confidence 456777887776666554444444445555554 478887654 78889999999999999999999987644
Q ss_pred HHHHHHHHHHHHHHH--hchhHHHHHHHHHHHHHhhhhHhHHH-HHHHHhhCcchhhHHHHHHHHHHHHHHHHHHHHHHH
Q 014462 267 AVAQVVMAFALLYYA--IGWPGEIYVTTVLVGLSYGAHWAIVP-AAASELFGLKSFGALYNFLTLASPAGSLIFSGVIAS 343 (424)
Q Consensus 267 ~~~~~~~~~~~ll~~--~~~~~~l~~~~~l~G~~~G~~~~~~~-~~~se~fg~~~~g~~~g~~~~~~~lgs~l~~~~l~g 343 (424)
.++..+++++.+++. ..+.+...+..++.+++.+...++.. ....+..+.+..|... .+....+|+.+ ||.++|
T Consensus 269 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~g~~~-Gp~~~G 345 (382)
T PRK10091 269 AVTDFIIVLALLMLFFFGGMKTASLIFAFICCAGLFALSAPLQILLLQNAKGGELLGAAG--GQIAFNLGSAI-GAYCGG 345 (382)
T ss_pred HHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhhhHHHHHHHHHhCCcchHHHHHH--HHHHHHHHHHH-HHHHhH
Confidence 344445555544332 22233344455556666554444333 3445555666666553 35667889987 999999
Q ss_pred HHHhhhhhhhhhhhhhccCCCCCcccCCCCCCcccCCcchHHHHHHHHHHHHHHHHHHHHHh
Q 014462 344 GIYDYYAEKQAGLLWKYNGNMLPVSFRDQETPTCLGSICYSITCGIMAGLCIIAMVMSLIVV 405 (424)
Q Consensus 344 ~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~g~~c~~~~f~i~a~~~~~~~~l~~~l~ 405 (424)
.++|..+ .|+..+.+.+++++++......+.
T Consensus 346 ~l~~~~~-------------------------------~~~~~~~~~~~~~~~~~~~~~~~~ 376 (382)
T PRK10091 346 MMLTLGL-------------------------------AYNYVALPAALLSFAAMSSLLLYG 376 (382)
T ss_pred HHHHccc-------------------------------CcchHHHHHHHHHHHHHHHHHHHh
Confidence 9999754 199999998887777665544433
No 114
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.25 E-value=2.8e-10 Score=114.66 Aligned_cols=149 Identities=15% Similarity=0.098 Sum_probs=121.7
Q ss_pred hHHHHHHHHHHHHhhhhHHHHHhcHHHHHHHcCCCchhH--HHHHHHHHhhhhhhhhhhhhhhhhhcccCchhHHHHHHH
Q 014462 193 KADFLLLFFSLVLASGSGLTVIDNLGQICQSLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQ 270 (424)
Q Consensus 193 ~~~fwll~~~~~~~~~~~~~~~~~l~~i~~~~g~s~~~~--~~sl~si~~~~gr~~~G~lsd~~g~k~~~~r~~~l~~~~ 270 (424)
++++|.++.+.++...........+|++.+++|.+..++ ..+...+++.++++..|+++||+|||+.+ ..+.
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~s~~~~G~~~s~~~l~~~~~~~~~g~l~dr~g~k~~~------~~~~ 78 (381)
T PRK03633 5 TRPVLLLLCGLLLLTLAIAVLNTLVPLWLAQEHLPTWQVGVVSSSYFTGNLVGTLLAGYVIKRIGFNRSY------YLAS 78 (381)
T ss_pred HHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHH------HHHH
Confidence 556788888877766665556678999999999987654 88899999999999999999999998755 4555
Q ss_pred HHHHHHHHHHH-hchhHHHHHHHHHHHHHhhhhHhHHHHHHHHhhCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 014462 271 VVMAFALLYYA-IGWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIASGIYDY 348 (424)
Q Consensus 271 ~~~~~~~ll~~-~~~~~~l~~~~~l~G~~~G~~~~~~~~~~se~fg~~~~g~~~g~~~~~~~lgs~l~~~~l~g~l~d~ 348 (424)
++.+++.+++. ..+.+.+++..++.|++.|..++.....+.+..+.++++++.+.......+|..+ |+.+.+.+.+.
T Consensus 79 ~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-g~~~~~~l~~~ 156 (381)
T PRK03633 79 LIFAAGCAGLGLMVGFWSWLAWRFVAGIGCAMIWVVVESALMCSGTSRNRGRLLAAYMMVYYLGTVL-GQLLVSKVSTE 156 (381)
T ss_pred HHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHH-HHHHHhccccc
Confidence 55555555544 4556778888999999999988888888888998999999999999999999997 89988887654
No 115
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=99.25 E-value=9.5e-11 Score=99.00 Aligned_cols=133 Identities=11% Similarity=0.174 Sum_probs=106.7
Q ss_pred HHHHHHhhhhhhhhhhhhhhhhhcccCchhHHHHHHHHHHHHHHHHHH-hchhHHHHHHHHHHHHHhhhhHhHHHHHHHH
Q 014462 234 SMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVMAFALLYYA-IGWPGEIYVTTVLVGLSYGAHWAIVPAAASE 312 (424)
Q Consensus 234 sl~si~~~~gr~~~G~lsd~~g~k~~~~r~~~l~~~~~~~~~~~ll~~-~~~~~~l~~~~~l~G~~~G~~~~~~~~~~se 312 (424)
+...++..++++..|++.||++||+.. ..+..+..++.+.+. ..+.+.+.+..++.|++.+...+.....+.|
T Consensus 5 ~~~~~~~~~~~~~~g~~~d~~g~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 78 (141)
T TIGR00880 5 AGYALGQLIYSPLSGLLTDRFGRKPVL------LVGLFIFVLSTAMFALSSNITVLIIARFLQGFGAAFALVAGAALIAD 78 (141)
T ss_pred EeehhHHHHHHhhHHHHHhhcchhHHH------HHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhHHHHHHH
Confidence 345778889999999999999988644 444444445444443 3455667778899999999999999999999
Q ss_pred hhCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhccCCCCCcccCCCCCCcccCCcchHHHHHHHHH
Q 014462 313 LFGLKSFGALYNFLTLASPAGSLIFSGVIASGIYDYYAEKQAGLLWKYNGNMLPVSFRDQETPTCLGSICYSITCGIMAG 392 (424)
Q Consensus 313 ~fg~~~~g~~~g~~~~~~~lgs~l~~~~l~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~g~~c~~~~f~i~a~ 392 (424)
.++.+++++..++.+....+|..+ ++.+.+.+.+..+ |+..|.+.+.
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~--------------------------------~~~~~~~~~~ 125 (141)
T TIGR00880 79 IYPPEERGVALGLMSAGIALGPLL-GPPLGGVLAQFLG--------------------------------WRAPFLFLAI 125 (141)
T ss_pred HCChhhhhHHHHHHHHhHHHHHHH-hHHhHHHHhcccc--------------------------------hHHHHHHHHH
Confidence 999999999999999999999997 8999999887655 8899999888
Q ss_pred HHHHHHHHHHHHh
Q 014462 393 LCIIAMVMSLIVV 405 (424)
Q Consensus 393 ~~~~~~~l~~~l~ 405 (424)
+++++.+....+.
T Consensus 126 ~~~~~~~~~~~~~ 138 (141)
T TIGR00880 126 LALAAFILLAFLL 138 (141)
T ss_pred HHHHHHHHHhhcC
Confidence 8877766665443
No 116
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.25 E-value=3e-10 Score=114.98 Aligned_cols=180 Identities=11% Similarity=0.101 Sum_probs=133.1
Q ss_pred CCHHHhhhhHHHHHHHHHHHHhhhhHHHHHhcHHHHHHHc----CCCchh--HHHHHHHHHhhhhhhhhhhhhhhhhhcc
Q 014462 185 FTLPQALMKADFLLLFFSLVLASGSGLTVIDNLGQICQSL----GYADTS--IYVSMISIWNFLGRVGGGYFSEAIVRKF 258 (424)
Q Consensus 185 ~t~~~~l~~~~fwll~~~~~~~~~~~~~~~~~l~~i~~~~----g~s~~~--~~~sl~si~~~~gr~~~G~lsd~~g~k~ 258 (424)
.+.++.++++++|.+.+..++.........++.+.+.++. +.+... ...++..+...++.+..|++.||+++|+
T Consensus 206 ~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~g~~~~~~~i~~~~~~~~~g~l~~r~g~~~ 285 (396)
T TIGR00882 206 KLALELFRQRKFWMFVLYVVGVACVYDVFDQQFANFFTSFFATPQQGTRVFGYVTTMGELLNALIMFCAPLIINRIGAKN 285 (396)
T ss_pred HHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccch
Confidence 3567889999998776665554444444555677777663 233222 2667777888889999999999999886
Q ss_pred cCchhHHHHHHHHHHHHHHHHHH-hchhHHHHHHHHHHHHHhhhhHhHHHHHHHHhhCcchhhHHHHH-HHHHHHHHHHH
Q 014462 259 AYPRPVAMAVAQVVMAFALLYYA-IGWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNF-LTLASPAGSLI 336 (424)
Q Consensus 259 ~~~r~~~l~~~~~~~~~~~ll~~-~~~~~~l~~~~~l~G~~~G~~~~~~~~~~se~fg~~~~g~~~g~-~~~~~~lgs~l 336 (424)
.. .++.+++++...++. ..+.+.+++..++.|++.+.........+.+.++.+.+++.++. .+....+|+.+
T Consensus 286 ~l------~~~~~l~~l~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~at~~~~~~~~~~~lg~~~ 359 (396)
T TIGR00882 286 AL------LIAGTIMSVRIIGSSFATTALEVVILKMLHAFEVPFLLVGCFKYITSQFDVRLSATIYLIGFQFAKQLAMIF 359 (396)
T ss_pred hH------HHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcceEEEeehHHHHHHHHHHHHH
Confidence 54 455555555554433 34566667778888888877777777788888988888887776 56789999997
Q ss_pred HHHHHHHHHHhhhhhhhhhhhhhccCCCCCcccCCCCCCcccCCcchHHHHHHHHHHHHHHHHHHHH
Q 014462 337 FSGVIASGIYDYYAEKQAGLLWKYNGNMLPVSFRDQETPTCLGSICYSITCGIMAGLCIIAMVMSLI 403 (424)
Q Consensus 337 ~~~~l~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~g~~c~~~~f~i~a~~~~~~~~l~~~ 403 (424)
++.+.|+++|..| |+.+|.+.+++.++..+.+.+
T Consensus 360 -~~~l~G~l~~~~G--------------------------------~~~~f~~~~~~~~i~~~~~~~ 393 (396)
T TIGR00882 360 -LSTLAGNMYDSIG--------------------------------FQGAYLVLGCIVLLFTLISVF 393 (396)
T ss_pred -HHHhHHHHHHhcc--------------------------------cHHHHHHHHHHHHHHHHHHHH
Confidence 8999999999877 999999999988887776654
No 117
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=99.24 E-value=3e-10 Score=117.49 Aligned_cols=148 Identities=19% Similarity=0.181 Sum_probs=108.0
Q ss_pred CCCchh--HHHHHHHHHhhhhhhhhhhhhhhhhhcccCchhHHHHHHHHHHHHHHHHHHh-------------chhHHHH
Q 014462 225 GYADTS--IYVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVMAFALLYYAI-------------GWPGEIY 289 (424)
Q Consensus 225 g~s~~~--~~~sl~si~~~~gr~~~G~lsd~~g~k~~~~r~~~l~~~~~~~~~~~ll~~~-------------~~~~~l~ 289 (424)
|.+... ...+...++.++|.+++|+++||+|||+.+ .++.+++.++.+..+. .....++
T Consensus 51 ~~~~~~~~~~~s~~~ig~~~~~~~~G~l~dr~Grr~~~------~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~ 124 (479)
T PRK10077 51 SAANSLLGFCVASALIGCIIGGALGGYCSNRFGRRDSL------KIAAVLFFISALGSAWPEFGFTSIGPDNTGYVPEFV 124 (479)
T ss_pred cCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHH------HHHHHHHHHHHHHHHhhccccccccccchhHHHHHH
Confidence 555544 388999999999999999999999999865 4444555544443322 1124567
Q ss_pred HHHHHHHHHhhhhHhHHHHHHHHhhCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhccCCCCCccc
Q 014462 290 VTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIASGIYDYYAEKQAGLLWKYNGNMLPVSF 369 (424)
Q Consensus 290 ~~~~l~G~~~G~~~~~~~~~~se~fg~~~~g~~~g~~~~~~~lgs~l~~~~l~g~l~d~~~~~~~~~~~~~~~~~~~~~~ 369 (424)
++.++.|++.|..++..+++++|++|+|+||+..++...+..+|..+ ++.+.+.+.......
T Consensus 125 ~~R~l~G~~~g~~~~~~~~~i~e~~~~~~rg~~~~~~~~~~~~G~~~-~~~~~~~~~~~~~~~----------------- 186 (479)
T PRK10077 125 IYRIIGGIGVGLASMLSPMYIAEIAPAHIRGKLVSFNQFAIIFGQLV-VYFVNYFIARSGDAS----------------- 186 (479)
T ss_pred HHHHHHhhhHhHHhhHHHHHHHhhCChhhhhHHHHHHHHHHHHHHHH-HHHHHHHHhccCccc-----------------
Confidence 88999999999999999999999999999999999999999999886 665555443322100
Q ss_pred CCCCCCcccCCcchHHHHHHHHHHHHHHHHHHHH
Q 014462 370 RDQETPTCLGSICYSITCGIMAGLCIIAMVMSLI 403 (424)
Q Consensus 370 ~~~~~~~c~g~~c~~~~f~i~a~~~~~~~~l~~~ 403 (424)
. .+...||+.|++.++..++..+..++
T Consensus 187 ------~-~~~~gWr~~f~~~~~~~~~~~~~~~~ 213 (479)
T PRK10077 187 ------W-LNTDGWRYMFASEAIPALLFLMLLYF 213 (479)
T ss_pred ------c-cccCChHHHHHHHHHHHHHHHHHHHc
Confidence 0 01113999999888877776554443
No 118
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=99.23 E-value=6.5e-10 Score=113.64 Aligned_cols=146 Identities=13% Similarity=0.001 Sum_probs=114.2
Q ss_pred HHHHHHHHHHhhhhHHHHHhcHHHHHHHcCCCchhH--HHHHHHHHhhhhhhhhhhhhhhhhhcccCchhHHHHHHHHHH
Q 014462 196 FLLLFFSLVLASGSGLTVIDNLGQICQSLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVM 273 (424)
Q Consensus 196 fwll~~~~~~~~~~~~~~~~~l~~i~~~~g~s~~~~--~~sl~si~~~~gr~~~G~lsd~~g~k~~~~r~~~l~~~~~~~ 273 (424)
++.+...+++...........+|++.+++|.+..+. ..+...++..++.+..|++.||+|+|+.+ .++.+++
T Consensus 5 ~~~~~~~f~~~G~~~~~~~~l~~~~~~~~~~s~~~~g~l~s~~~~g~~i~~~~~g~l~~r~G~r~~~------~~g~~l~ 78 (410)
T TIGR00885 5 FALITSLFALWGFANDITNPMVPQFQQAFTLTAFQAALVQSAFYGGYFIMAIPAAIFMKKLSYKAGI------LLGLFLY 78 (410)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHH------HHHHHHH
Confidence 454444444333222222345688888899987654 88899999999999999999999998765 6677777
Q ss_pred HHHHHHHHh----chhHHHHHHHHHHHHHhhhhHhHHHHHHHHhhCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 014462 274 AFALLYYAI----GWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIASGIYDY 348 (424)
Q Consensus 274 ~~~~ll~~~----~~~~~l~~~~~l~G~~~G~~~~~~~~~~se~fg~~~~g~~~g~~~~~~~lgs~l~~~~l~g~l~d~ 348 (424)
+++.+++.. .+.+.+++..++.|++.|...+...+++.+..+.+++++..++.+....+|+.+ +|.+.+.+...
T Consensus 79 ~~g~~l~~~~~~~~~~~~~l~~~~l~G~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~~-g~~i~~~l~~~ 156 (410)
T TIGR00885 79 ALGAFLFWPAAEIMNYTLFLVGLFILTAGLGFLETAANPYILVMGPESTATRRLNLAQSFNPFGSII-GMVVAQQLILS 156 (410)
T ss_pred HHHHHHHHHHHhhccHHHHHHHHHHHHhhHHHHHhhhhHHHHHHCCHhHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhc
Confidence 777766432 245667788899999999999999999999999999999999999999999997 89998877533
No 119
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=99.23 E-value=1.4e-10 Score=118.36 Aligned_cols=123 Identities=21% Similarity=0.280 Sum_probs=96.0
Q ss_pred HHhcHHHHHHHcCCC--------chh--HHHHHHHHHhhhhhhhhhhhhhhhhhcccCchhHHHHHHHHHHHHHHHHHH-
Q 014462 213 VIDNLGQICQSLGYA--------DTS--IYVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVMAFALLYYA- 281 (424)
Q Consensus 213 ~~~~l~~i~~~~g~s--------~~~--~~~sl~si~~~~gr~~~G~lsd~~g~k~~~~r~~~l~~~~~~~~~~~ll~~- 281 (424)
+...++.+..+++.+ ..+ ...+...++..++.+.+|+++||+|||+.+ .++.++.+++.++..
T Consensus 47 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~grr~~~------~~~~~~~~~~~~~~~~ 120 (481)
T TIGR00879 47 IGGALALPAFEFKFTSANSDSYSSSLWGLVVSIFLVGGFIGALFAGWLSDRFGRKKSL------LIIALLFVIGAILMGL 120 (481)
T ss_pred hhhhhhcHHHHHhcCCcccCCCChhHHHHHHHHHHHHHHHHHHHhhHhhhhhhhHHHH------HHHHHHHHHHHHHHHH
Confidence 334456666665554 333 388899999999999999999999998654 455555555554442
Q ss_pred hc---hhHHHHHHHHHHHHHhhhhHhHHHHHHHHhhCcchhhHHHHHHHHHHHHHHHHHHHHHH
Q 014462 282 IG---WPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIA 342 (424)
Q Consensus 282 ~~---~~~~l~~~~~l~G~~~G~~~~~~~~~~se~fg~~~~g~~~g~~~~~~~lgs~l~~~~l~ 342 (424)
.. +.+.+++..++.|++.|..++...++++|.++.++|+++.++.+.+..+|..+ ++.+.
T Consensus 121 ~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~-~~~~~ 183 (481)
T TIGR00879 121 AAFALSVEMLIVGRVLLGIGVGIASALVPMYLSEIAPKALRGALTSLYQLAITFGILV-AYGFG 183 (481)
T ss_pred hccccchHHHHHHHHHHHhhhhHHHhHHHHHHHccCChhhhhhhhhHHHHHHHHHHHH-HHHHH
Confidence 12 23367889999999999999999999999999999999999999999999997 78776
No 120
>PRK15075 citrate-proton symporter; Provisional
Probab=99.22 E-value=8.8e-10 Score=113.20 Aligned_cols=155 Identities=12% Similarity=0.061 Sum_probs=102.5
Q ss_pred HhhhhHHHHHHHH-HHHHhhhhHHHHHhcHHHHHHH-cCCCchhH--HHHHHHHHhhhhhhhhhhhhhhhhhcccCchhH
Q 014462 189 QALMKADFLLLFF-SLVLASGSGLTVIDNLGQICQS-LGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPV 264 (424)
Q Consensus 189 ~~l~~~~fwll~~-~~~~~~~~~~~~~~~l~~i~~~-~g~s~~~~--~~sl~si~~~~gr~~~G~lsd~~g~k~~~~r~~ 264 (424)
+..++++.|.... ..++.......+..++|.++++ +|++..+. +..+.++++.++++.+|+++||++||+..
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~---- 307 (434)
T PRK15075 232 SLAANWRIVLAGMLMVAMTTVSFYLITVYTPTFGKTVLHLSAADSLLVTLCVGVSNFIWLPIGGALSDRIGRRPVL---- 307 (434)
T ss_pred HHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHH----
Confidence 3445555554432 2333334455567789999876 79987654 66678889999999999999999987643
Q ss_pred HHHHHHHHHHH-HHHH--HH-h-chhHHHHHHHHHHHHHhhhhHhHHHHHHHHhhCcchhhHHHHHHHH-HHHHHHHHHH
Q 014462 265 AMAVAQVVMAF-ALLY--YA-I-GWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTL-ASPAGSLIFS 338 (424)
Q Consensus 265 ~l~~~~~~~~~-~~ll--~~-~-~~~~~l~~~~~l~G~~~G~~~~~~~~~~se~fg~~~~g~~~g~~~~-~~~lgs~l~~ 338 (424)
..+.++.++ .... .. . .+...+.+..++.|++.|...+..+.+++|.+|.+.+|+..++.+. +..+++.+ +
T Consensus 308 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~e~~p~~~rg~~~g~~~~~~~~~~g~~-~ 384 (434)
T PRK15075 308 --IAFTVLAILTAYPALSWLVAAPSFARMLAVELWLSFLYGSYNGAMVVALTEVMPAEVRTAGFSLAYSLATAIFGGF-T 384 (434)
T ss_pred --HHHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHHHhhHHHHHHHHCCCCccchheeHHHHHHHHHHhhh-H
Confidence 121111111 1111 11 1 1222333445566778887777778899999999999999998644 44455665 8
Q ss_pred HHHHHHHHhhhh
Q 014462 339 GVIASGIYDYYA 350 (424)
Q Consensus 339 ~~l~g~l~d~~~ 350 (424)
|.+.|.+.|..+
T Consensus 385 p~~~g~i~~~~g 396 (434)
T PRK15075 385 PAISTWLIHVTG 396 (434)
T ss_pred HHHHHHHHHhcC
Confidence 999999999876
No 121
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.21 E-value=1.3e-09 Score=114.01 Aligned_cols=180 Identities=12% Similarity=0.115 Sum_probs=125.3
Q ss_pred HHHhhhhHHHHHHHHHHHHhhhhHHHHHhcHHHHH-HHcCCCchhH--HH-HHHHHHhhhhhhhhhhhhhhhhhcccCch
Q 014462 187 LPQALMKADFLLLFFSLVLASGSGLTVIDNLGQIC-QSLGYADTSI--YV-SMISIWNFLGRVGGGYFSEAIVRKFAYPR 262 (424)
Q Consensus 187 ~~~~l~~~~fwll~~~~~~~~~~~~~~~~~l~~i~-~~~g~s~~~~--~~-sl~si~~~~gr~~~G~lsd~~g~k~~~~r 262 (424)
+++.++++.+|.+....++..........+.++++ +++|++..+. +. ....++..+|.+++|+++||+++|+..
T Consensus 215 l~~~~~~~~~~~~ll~~~l~~~~~~~~~~~~~~~l~~~~G~s~~~~g~~~~~~g~i~~iiG~ll~G~L~dr~g~~~~l-- 292 (491)
T PRK11010 215 LRDFFGRNNAWLILLLIVLYKLGDAFAMSLTTTFLIRGVGFDAGEVGLVNKTLGLLATIVGALYGGILMQRLSLFRAL-- 292 (491)
T ss_pred HHHHHcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHH--
Confidence 44566677777665554444433344445666665 4589988765 33 345578999999999999999987533
Q ss_pred hHHHHHHHHHHHHH---HHHHHh--chhHHHHHHHHHHHHHhhhhHhHHHHHHHHhhCcchhhHHHHHHHHHHHHHHHHH
Q 014462 263 PVAMAVAQVVMAFA---LLYYAI--GWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIF 337 (424)
Q Consensus 263 ~~~l~~~~~~~~~~---~ll~~~--~~~~~l~~~~~l~G~~~G~~~~~~~~~~se~fg~~~~g~~~g~~~~~~~lgs~l~ 337 (424)
.++.++.+++ ...+.. .+...+....++..++.|...+...+...++.+.+..|+.+++.+....+|..+
T Consensus 293 ----~i~~~l~~l~~l~~~~l~~~~~~~~~l~~~~~l~~~~~g~~~~~~~a~~~~l~~~~~~~t~~gl~~s~~~lg~~~- 367 (491)
T PRK11010 293 ----MIFGILQGVSNAGYWLLSITDKNLYSMGAAVFFENLCGGMGTAAFVALLMTLCNKSFSATQFALLSALSAVGRVY- 367 (491)
T ss_pred ----HHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHH-
Confidence 2222222222 222222 222334445566666667666777888899999889999999999999999987
Q ss_pred HHHHHHHHHhhhhhhhhhhhhhccCCCCCcccCCCCCCcccCCcchHHHHHHHHHHHHHHHHHHHHHh
Q 014462 338 SGVIASGIYDYYAEKQAGLLWKYNGNMLPVSFRDQETPTCLGSICYSITCGIMAGLCIIAMVMSLIVV 405 (424)
Q Consensus 338 ~~~l~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~g~~c~~~~f~i~a~~~~~~~~l~~~l~ 405 (424)
++.+.|.++|..| |+..|.+.+++++.+.++...++
T Consensus 368 ~~~~~G~l~~~~G--------------------------------~~~~f~~~~~~~l~~l~~~~~~~ 403 (491)
T PRK11010 368 VGPVAGWFVEAHG--------------------------------WPTFYLFSVAAAVPGLLLLLVCR 403 (491)
T ss_pred HHHHHHHHHHHhC--------------------------------hHHHHHHHHHHHHHHHHHHHHHH
Confidence 6778999999776 99999999999999877776654
No 122
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.20 E-value=3.4e-10 Score=115.53 Aligned_cols=174 Identities=14% Similarity=0.088 Sum_probs=114.7
Q ss_pred hhhhHHHHHHHHHHHHhhhhHHHHHhcHHHHHHH-cCCCchhH--HHHHHHHHhhhhhhhhhhhhhhhhhcccCchhHHH
Q 014462 190 ALMKADFLLLFFSLVLASGSGLTVIDNLGQICQS-LGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAM 266 (424)
Q Consensus 190 ~l~~~~fwll~~~~~~~~~~~~~~~~~l~~i~~~-~g~s~~~~--~~sl~si~~~~gr~~~G~lsd~~g~k~~~~r~~~l 266 (424)
.++++++|.+.+..++...+...+...++.++++ +|++..+. ..+...+...++++.+|+++||+|||+.+
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~g~~~s~~~l~~~i~~~~~G~l~Dr~g~r~~~------ 79 (420)
T PRK09528 6 YLKNPNYWIFSLFFFFFFFIWSSWFSFFPIWLHDINGLSGTDTGIIFSANSLFALLFQPLYGLISDKLGLKKHL------ 79 (420)
T ss_pred hhcCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHH------
Confidence 6678899999888888877666667778888766 89998765 89999999999999999999999988754
Q ss_pred HHHHHHHHHHHH---HHHhchhH--HHHHHHHHHHHHhh----hhHhHHHHHHHHhhCcchhhHHHHHHHHHHHHHHHHH
Q 014462 267 AVAQVVMAFALL---YYAIGWPG--EIYVTTVLVGLSYG----AHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIF 337 (424)
Q Consensus 267 ~~~~~~~~~~~l---l~~~~~~~--~l~~~~~l~G~~~G----~~~~~~~~~~se~fg~~~~g~~~g~~~~~~~lgs~l~ 337 (424)
.++..+.+++.. .+...... .......+.++..| ...+...... +.+ .+++|..+|.......+|..+
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~g~~~g~~~~~~~~g~~i- 156 (420)
T PRK09528 80 LWIISGLLVLFGPFFIYVFAPLLQYNILLGAIVGGIYLGFGFLAGAGAIEAYI-ERV-SRRSGFEYGRARMWGSLGWAL- 156 (420)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccchhhhhhHH-HHH-HhhccccchhhHHhhhHHHHH-
Confidence 222222221111 11111100 11112222233333 3222333332 323 345688889989999999997
Q ss_pred HHHHHHHHHhhhhhhhhhhhhhccCCCCCcccCCCCCCcccCCcchHHHHHHHHHHHHHHHHHHHHHh
Q 014462 338 SGVIASGIYDYYAEKQAGLLWKYNGNMLPVSFRDQETPTCLGSICYSITCGIMAGLCIIAMVMSLIVV 405 (424)
Q Consensus 338 ~~~l~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~g~~c~~~~f~i~a~~~~~~~~l~~~l~ 405 (424)
+|.++|.+++. + |+..|++.++++++..++.+.+.
T Consensus 157 ~~~~~g~l~~~-~--------------------------------~~~~f~~~~~~~~~~~~~~~~~~ 191 (420)
T PRK09528 157 CAFIAGILFNI-N--------------------------------PQINFWLGSGSALILLVLLFFAK 191 (420)
T ss_pred HHHHHHHHHhc-C--------------------------------chHhHHHHHHHHHHHHHHHhccc
Confidence 89999988763 3 78889888888777666655444
No 123
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=99.20 E-value=1.4e-08 Score=103.01 Aligned_cols=155 Identities=9% Similarity=0.037 Sum_probs=109.2
Q ss_pred HHhhhhHHHHHHHHHHHHhhhhHHHHHhcH-HHHHHHcCCCchhH--HHHHHHHHhhhhhhhhhhhhhhhhhcccCchhH
Q 014462 188 PQALMKADFLLLFFSLVLASGSGLTVIDNL-GQICQSLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPV 264 (424)
Q Consensus 188 ~~~l~~~~fwll~~~~~~~~~~~~~~~~~l-~~i~~~~g~s~~~~--~~sl~si~~~~gr~~~G~lsd~~g~k~~~~r~~ 264 (424)
++.++++.+|...+..++..........+. |.+.+++|++.... ..+..++++.+|+++.|++.||.+++ .
T Consensus 210 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~g~~~~~~~~~~iig~~~~~~l~~r~~~~-~----- 283 (394)
T PRK10213 210 FRLLQRPGVMAGMIAIFMSFAGQFAFFTYIRPVYMNLAGFGVDGLTLVLLSFGIASFVGTSLSSFILKRSVKL-A----- 283 (394)
T ss_pred HHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHhccchh-H-----
Confidence 347788999987766666555555555555 55666789887654 67778889999999999998884322 1
Q ss_pred HHHHHHHHHHHHHHHHH-hchhHHHHHHHHHHHHHhhhhHhHHHHHHHHhhCcchhhHHHHHHHHHHHHHHHHHHHHHHH
Q 014462 265 AMAVAQVVMAFALLYYA-IGWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIAS 343 (424)
Q Consensus 265 ~l~~~~~~~~~~~ll~~-~~~~~~l~~~~~l~G~~~G~~~~~~~~~~se~fg~~~~g~~~g~~~~~~~lgs~l~~~~l~g 343 (424)
......+......++.. ..+.+.+++..++.|++++...+..++.+.+..+ ++.+...++......+|..+ |+.++|
T Consensus 284 l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~lg~~~-G~~l~G 361 (394)
T PRK10213 284 LAGAPLVLAVSALVLTLWGSDKIVATGVAIIWGLTFALVPVGWSTWITRSLA-DQAEKAGSIQVAVIQLANTC-GAAIGG 361 (394)
T ss_pred HHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHhhhHHHHHHHHHHCc-ccHHHHHHHHHHHHHHHHHH-HHHHHH
Confidence 11222222222222222 3345566778888999999999888888888886 55677888877888899987 999999
Q ss_pred HHHhhhh
Q 014462 344 GIYDYYA 350 (424)
Q Consensus 344 ~l~d~~~ 350 (424)
.++|..+
T Consensus 362 ~l~~~~g 368 (394)
T PRK10213 362 YALDNIG 368 (394)
T ss_pred HHHhccC
Confidence 9999876
No 124
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=99.19 E-value=1.2e-09 Score=111.77 Aligned_cols=159 Identities=10% Similarity=0.061 Sum_probs=127.0
Q ss_pred cHHHHHHHcCCCchh-H--HHHHHHHHhhhhhhhhhhhhhhhhhcccCchhHHHHHHHHHHHHHHHHHH-hchhHHHHHH
Q 014462 216 NLGQICQSLGYADTS-I--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVMAFALLYYA-IGWPGEIYVT 291 (424)
Q Consensus 216 ~l~~i~~~~g~s~~~-~--~~sl~si~~~~gr~~~G~lsd~~g~k~~~~r~~~l~~~~~~~~~~~ll~~-~~~~~~l~~~ 291 (424)
..|.+.+++|+++.+ . +.+.+..+..+..+.+|+++||+|.|+.+ .++.+.-++..++.. ..+...+.+.
T Consensus 48 a~p~L~~elglT~~qv~G~I~s~F~ysYal~qIp~GlLaDrlG~K~vL------~l~~l~Wsl~t~L~~fa~Sl~~L~i~ 121 (511)
T TIGR00806 48 ITPYLLTVLNFTEETVTNEIIPVLPYSHLAVLVPVFLLTDYLRYKPVL------VLQALSFVCVWLLLLLGTSVWHMQLM 121 (511)
T ss_pred HHHHHHHHcCCCHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCchHHH------HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 456677889999887 3 88999999999999999999999988755 444444444444433 3456788999
Q ss_pred HHHHHHHhhhhHhHHHHHHHHhhCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhccCCCCCcccCC
Q 014462 292 TVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIASGIYDYYAEKQAGLLWKYNGNMLPVSFRD 371 (424)
Q Consensus 292 ~~l~G~~~G~~~~~~~~~~se~fg~~~~g~~~g~~~~~~~lgs~l~~~~l~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~ 371 (424)
.++.|++.|..+ ....++..+||+++|+++.++.+.+..+|.++ ++++++. ....+.+
T Consensus 122 R~llGvaEA~~~-A~~syI~~WfP~kER~ratsi~~sg~~vG~~I-a~~L~ql-l~s~gWr------------------- 179 (511)
T TIGR00806 122 EVFYSVTMAARI-AYSSYIFSLVPPSRYQRAAAYSRAAVLLGVFL-SSVLGQL-LVTLGWI------------------- 179 (511)
T ss_pred HHHHHHHHHHHH-HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH-HHHHHHH-HHhcCch-------------------
Confidence 999999999999 99999999999999999999999999999998 8888888 3334421
Q ss_pred CCCCcccCCcchHHHHHHHHHHHHHHHHHHHHHhhhhhHHH
Q 014462 372 QETPTCLGSICYSITCGIMAGLCIIAMVMSLIVVHRTKSVY 412 (424)
Q Consensus 372 ~~~~~c~g~~c~~~~f~i~a~~~~~~~~l~~~l~~~~~~~~ 412 (424)
.|+...++..+...+++++++++...+|..|
T Consensus 180 ----------~y~~Ln~Isl~s~~~a~~~a~~LP~~~~sl~ 210 (511)
T TIGR00806 180 ----------SYSTLNIISLVFMTFSVFLALFLKRPKRSLF 210 (511)
T ss_pred ----------hHHHHHHHHHHHHHHHHHHHHhCCCCchhhh
Confidence 2777788888888889999988876555433
No 125
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.19 E-value=9.7e-10 Score=114.80 Aligned_cols=142 Identities=13% Similarity=0.023 Sum_probs=101.8
Q ss_pred HHHHHHHHHhhhhHHHHHhcHHHHHHHcCC--Cch-hH-----HHHHHHHHhhhhhhhhhhhhhhhhhcccCchhHHHHH
Q 014462 197 LLLFFSLVLASGSGLTVIDNLGQICQSLGY--ADT-SI-----YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAV 268 (424)
Q Consensus 197 wll~~~~~~~~~~~~~~~~~l~~i~~~~g~--s~~-~~-----~~sl~si~~~~gr~~~G~lsd~~g~k~~~~r~~~l~~ 268 (424)
+...++.++-......+....|.+.++++. ++. +. ..++..++..+|.+..|+++||+|||+.+ .+
T Consensus 19 ~~~~~g~~~~~~d~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~Grr~~l------~~ 92 (490)
T PRK10642 19 TAASLGNAMEWFDFGVYGFVAYALGKVFFPGADPSVQMIAALATFSVPFLIRPLGGLFFGMLGDKYGRQKIL------AI 92 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHH------HH
Confidence 334444444433333444456667677643 222 11 23566688889999999999999999765 66
Q ss_pred HHHHHHHHHHHHHhc-hhH--------HHHHHHHHHHHHhhhhHhHHHHHHHHhhCcchhhHHHHHHHHHHHHHHHHHHH
Q 014462 269 AQVVMAFALLYYAIG-WPG--------EIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSG 339 (424)
Q Consensus 269 ~~~~~~~~~ll~~~~-~~~--------~l~~~~~l~G~~~G~~~~~~~~~~se~fg~~~~g~~~g~~~~~~~lgs~l~~~ 339 (424)
+.++++++.++.+.. +.. .+.+..++.|++.|+.++...++++|++|+|+||+..++...+..+|..+ ++
T Consensus 93 ~~~l~~i~~~~~a~~~~~~~~g~~a~~~l~~~R~l~G~g~g~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~G~~l-g~ 171 (490)
T PRK10642 93 TIVIMSISTFCIGLIPSYATIGIWAPILLLLCKMAQGFSVGGEYTGASIFVAEYSPDRKRGFMGSWLDFGSIAGFVL-GA 171 (490)
T ss_pred HHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhHhHhhHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHH-HH
Confidence 677777777666543 322 36788999999999999999999999999999999999988888888775 66
Q ss_pred HHHHHH
Q 014462 340 VIASGI 345 (424)
Q Consensus 340 ~l~g~l 345 (424)
.+...+
T Consensus 172 ~~~~~~ 177 (490)
T PRK10642 172 GVVVLI 177 (490)
T ss_pred HHHHHH
Confidence 555444
No 126
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.18 E-value=9.7e-10 Score=109.49 Aligned_cols=157 Identities=12% Similarity=-0.020 Sum_probs=113.2
Q ss_pred HHHHhcHHHHH-HHcCCCchhH--HHHHHHHHhhhhhhhhhhhhhhhhhcccCchhHHHHHHHHHHHHHHHHHH-hchhH
Q 014462 211 LTVIDNLGQIC-QSLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVMAFALLYYA-IGWPG 286 (424)
Q Consensus 211 ~~~~~~l~~i~-~~~g~s~~~~--~~sl~si~~~~gr~~~G~lsd~~g~k~~~~r~~~l~~~~~~~~~~~ll~~-~~~~~ 286 (424)
......+|.+. +++|.+.... ..+...+...+..+..|+++||+||||.+ +..+.++.+++.++++ ..+.+
T Consensus 14 ~~~~~~l~~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~-----~~~~~~~~~~~~~~~~~~~~~~ 88 (375)
T TIGR00899 14 ALQFPTLSLFLSEEVRARPAMIGLFYTGSAIVGIAVSQLLATRSDYQGDRKGL-----ILFCCLLAALACLLFAWNRNYF 88 (375)
T ss_pred HHHhhHHHHHHHcccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchHH-----HHHHHHHHHHHHHHHHhcchHH
Confidence 33444566655 5689887654 77888889999999999999999987643 1223333344433444 34455
Q ss_pred HHHHHHHHHHHHhhhhHhHHHHHHHHhhCcchhhHH--HHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhccCCC
Q 014462 287 EIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGAL--YNFLTLASPAGSLIFSGVIASGIYDYYAEKQAGLLWKYNGNM 364 (424)
Q Consensus 287 ~l~~~~~l~G~~~G~~~~~~~~~~se~fg~~~~g~~--~g~~~~~~~lgs~l~~~~l~g~l~d~~~~~~~~~~~~~~~~~ 364 (424)
.+++..++.|.+.+...+...+.+.|..+.+.++.. .+.......+|..+ +|.+.+.+.+..+
T Consensus 89 ~l~~~~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i-g~~~~~~l~~~~~-------------- 153 (375)
T TIGR00899 89 LLLVLGVLLSSFASTANPQLFALAREHADRTGREAVMFSSVMRAQISLAWVI-GPPLAFWLALGFG-------------- 153 (375)
T ss_pred HHHHHHHHHHhhhhhhHHHHHHHHHHHhhhcchhhHHHHHHHHHHHhHHHHH-hhhHHHHHHHhcc--------------
Confidence 666667777777777777777888888877666643 67778888899987 8999999988766
Q ss_pred CCcccCCCCCCcccCCcchHHHHHHHHHHHHHHHHHHHHHh
Q 014462 365 LPVSFRDQETPTCLGSICYSITCGIMAGLCIIAMVMSLIVV 405 (424)
Q Consensus 365 ~~~~~~~~~~~~c~g~~c~~~~f~i~a~~~~~~~~l~~~l~ 405 (424)
|++.|++.+.++++..++.+.+.
T Consensus 154 ------------------~~~~f~~~~~~~~~~~~~~~~~~ 176 (375)
T TIGR00899 154 ------------------FTVMFLTAALAFVLCGVLVWLFL 176 (375)
T ss_pred ------------------cHHHHHHHHHHHHHHHHHHHHhC
Confidence 99999999988777766665533
No 127
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.18 E-value=6.1e-10 Score=112.72 Aligned_cols=173 Identities=15% Similarity=0.127 Sum_probs=119.5
Q ss_pred hHHHHHHHHHHHHhhhhHHHHHhcHHHHHHH-cCCCchhH--HHHHHHHHhhhhhhhhhhhhhhhhhcccCchhHHHHHH
Q 014462 193 KADFLLLFFSLVLASGSGLTVIDNLGQICQS-LGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVA 269 (424)
Q Consensus 193 ~~~fwll~~~~~~~~~~~~~~~~~l~~i~~~-~g~s~~~~--~~sl~si~~~~gr~~~G~lsd~~g~k~~~~r~~~l~~~ 269 (424)
||++|.+....++...+...+...+|.+.++ +|++..+. ..++..+...++++..|+++||+|||+.+. ...+.
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~l~~~i~~~~~G~l~Dr~grr~~~~---~~~~~ 77 (396)
T TIGR00882 1 NTNFWMFGLFFFLYFFIMSAYFPFFPIWLHDVNGLSKTDTGIVFSCISLFSILFQPLFGLISDKLGLKKHLL---WIISG 77 (396)
T ss_pred ChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHH---HHHHH
Confidence 5789999888888877776777788887765 79988765 899999999999999999999999987651 11111
Q ss_pred HHHHHHHHHHHHhch------hHHHHHHHHHHHHHhhhhHhHHHHHHHHhhCcchhhHHHHHHHHHHHHHHHHHHHHHHH
Q 014462 270 QVVMAFALLYYAIGW------PGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIAS 343 (424)
Q Consensus 270 ~~~~~~~~ll~~~~~------~~~l~~~~~l~G~~~G~~~~~~~~~~se~fg~~~~g~~~g~~~~~~~lgs~l~~~~l~g 343 (424)
..+.......+.... ...+.+..++.|++++...+....++.+.- ++.+..+|.......+|..+ +|.++|
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~--~~~~~~~g~~~~~~~~g~~~-g~~~~g 154 (396)
T TIGR00882 78 LLVLFAPFFIYVFGPLLQSNILVGAIVGGLYLGFVFSAGAGAIEAYIEKVS--RNSNFEYGKARMFGCVGWAL-CASIAG 154 (396)
T ss_pred HHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhccchhhHHHHHHHhh--hhcccccchhhhhcccHHHH-HHHHHh
Confidence 111111111111111 112344556677777777777666666643 33456777888888899987 899988
Q ss_pred HHHhhhhhhhhhhhhhccCCCCCcccCCCCCCcccCCcchHHHHHHHHHHHHHHHHHHHHH
Q 014462 344 GIYDYYAEKQAGLLWKYNGNMLPVSFRDQETPTCLGSICYSITCGIMAGLCIIAMVMSLIV 404 (424)
Q Consensus 344 ~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~g~~c~~~~f~i~a~~~~~~~~l~~~l 404 (424)
.+++. + |+..|++.+.+.++..++.+..
T Consensus 155 ~l~~~-~--------------------------------~~~~f~~~~~~~~~~~~~~~~~ 182 (396)
T TIGR00882 155 ILFSI-D--------------------------------PQIVFWLGSGFALILMLLLMFA 182 (396)
T ss_pred hhhcc-C--------------------------------chHHHHHHHHHHHHHHHHHHHh
Confidence 87653 4 8999999888888776655443
No 128
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=99.18 E-value=1.6e-09 Score=111.30 Aligned_cols=126 Identities=16% Similarity=0.102 Sum_probs=91.3
Q ss_pred HHhcHHHHHHHcC---CCchhH-----HHHHHHHHhhhhhhhhhhhhhhhhhcccCchhHHHHHHHHHHHHHHHHHHh-c
Q 014462 213 VIDNLGQICQSLG---YADTSI-----YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVMAFALLYYAI-G 283 (424)
Q Consensus 213 ~~~~l~~i~~~~g---~s~~~~-----~~sl~si~~~~gr~~~G~lsd~~g~k~~~~r~~~l~~~~~~~~~~~ll~~~-~ 283 (424)
+..-.|.+.++++ .+..+. ..+...++..+|.+.+|+++||+|||+.+ ..+.++++++.++.+. .
T Consensus 41 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~~~G~l~Dr~Grr~~l------~~~~~~~~~~~~~~~~~~ 114 (432)
T PRK10406 41 YSFCSLYFAHIFFPSGNTTTQLLQTAGVFAAGFLMRPIGGWLFGRIADKHGRKKSM------LISVCMMCFGSLVIACLP 114 (432)
T ss_pred HHHHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHH------HHHHHHHHHHHHHHhhcC
Confidence 3344566667764 343321 34455566668999999999999999865 5566666666555443 2
Q ss_pred h--------hHHHHHHHHHHHHHhhhhHhHHHHHHHHhhCcchhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 014462 284 W--------PGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIASGI 345 (424)
Q Consensus 284 ~--------~~~l~~~~~l~G~~~G~~~~~~~~~~se~fg~~~~g~~~g~~~~~~~lgs~l~~~~l~g~l 345 (424)
+ +..+++..++.|++.|+.++...++++|.+|+++||...++...+...|..+ ++.+.+.+
T Consensus 115 ~~~~~~~~~~~~l~~~R~l~G~g~g~~~~~~~~~i~e~~p~~~rg~~~~~~~~~~~~G~~~-~~~~~~~~ 183 (432)
T PRK10406 115 GYETIGTWAPALLLLARLFQGLSVGGEYGTSATYMSEVAVEGRKGFYASFQYVTLIGGQLL-ALLVVVVL 183 (432)
T ss_pred CchhHHHHHHHHHHHHHHHHHhhhhhhHhhHHHHHHHhCCCCcccHHHHHHHHHHHHHHHH-HHHHHHHH
Confidence 2 2357788999999999999999999999999999999999888777777765 66554443
No 129
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=99.18 E-value=2.6e-08 Score=100.94 Aligned_cols=185 Identities=15% Similarity=0.110 Sum_probs=138.0
Q ss_pred HHHhhhhHHHHHHHHHHHHhhhhHHHHHhcHHHHHHHcCCCch---h---HHHHHHHHHhhhhhhhhhhhhhhhhhcccC
Q 014462 187 LPQALMKADFLLLFFSLVLASGSGLTVIDNLGQICQSLGYADT---S---IYVSMISIWNFLGRVGGGYFSEAIVRKFAY 260 (424)
Q Consensus 187 ~~~~l~~~~fwll~~~~~~~~~~~~~~~~~l~~i~~~~g~s~~---~---~~~sl~si~~~~gr~~~G~lsd~~g~k~~~ 260 (424)
..+++|+++||.+.+...........+....+.+.+.+--+.. + ...++..+..++.-..+.++.+|+|.|+.+
T Consensus 213 ~~~l~k~~~fw~~~l~v~g~~~~Y~vfdqqf~~y~~~~f~~~~~g~~~~G~l~s~~v~~E~~~m~~~p~li~rig~k~~L 292 (412)
T PF01306_consen 213 VLSLFKMRNFWFFVLFVIGVAAIYDVFDQQFPIYFASFFQSAGQGNQMYGYLWSVQVFLEALMMFFSPWLINRIGAKNLL 292 (412)
T ss_dssp HHHHTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHH
T ss_pred HHHHhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccChhHHhHHHHHHHHHHHHHHHHHHHHHHhcChHhHH
Confidence 3458999999987665444333444444456666666433321 1 267777788888999999999999988755
Q ss_pred chhHHHHHHHHHHHHHHHHHH-hchhHHHHHHHHHHHHHhhhhHhHHHHHHHHhhCcchhhHHHHHH-HHHHHHHHHHHH
Q 014462 261 PRPVAMAVAQVVMAFALLYYA-IGWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFL-TLASPAGSLIFS 338 (424)
Q Consensus 261 ~r~~~l~~~~~~~~~~~ll~~-~~~~~~l~~~~~l~G~~~G~~~~~~~~~~se~fg~~~~g~~~g~~-~~~~~lgs~l~~ 338 (424)
.++.+++++=....+ ..+++.+.+.-.+.|+-++.......-++++.|++|-.++.|.+. +.+.++|..++
T Consensus 293 ------llag~i~~iRi~~~~~~~~~~~i~~~klLH~~e~~l~lva~fkYI~~~fd~rlsAt~y~v~~~~~~~~~~~i~- 365 (412)
T PF01306_consen 293 ------LLAGVIMAIRIIGSGFATNPWVISLIKLLHALEFPLLLVAAFKYITAHFDKRLSATLYLVGFQFAKQIGIIIL- 365 (412)
T ss_dssp ------HHHHHHHHHHHHHHHT--SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS-GGGHHHHHHHHHTTTHHHHHHHH-
T ss_pred ------HHHHHHHHHHHHHHhhhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhHHHHHHHHHHHHHHHHHHHHH-
Confidence 555566665555555 456778888899999999999999999999999999999999996 68899999985
Q ss_pred HHHHHHHHhhhhhhhhhhhhhccCCCCCcccCCCCCCcccCCcchHHHHHHHHHHHHHHHHHHHHHhhhhhH
Q 014462 339 GVIASGIYDYYAEKQAGLLWKYNGNMLPVSFRDQETPTCLGSICYSITCGIMAGLCIIAMVMSLIVVHRTKS 410 (424)
Q Consensus 339 ~~l~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~g~~c~~~~f~i~a~~~~~~~~l~~~l~~~~~~ 410 (424)
..++|.+||+.| |+.+|++++++.+...+++.+..++.++
T Consensus 366 s~~~G~lyd~~G--------------------------------~~~tylimg~iv~~~~li~~f~l~~~~~ 405 (412)
T PF01306_consen 366 SPLAGYLYDRIG--------------------------------FQHTYLIMGLIVLPFTLISAFTLKKDKK 405 (412)
T ss_dssp HHHHHHHHHHHH--------------------------------HHHHHHHHHHHHHHHHHHHHHHS--SSS
T ss_pred hhhHHhhHhhcC--------------------------------cHHHHHHHHHHHHHHHHHheeeecCCCc
Confidence 778999999998 9999999999988888888776655443
No 130
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.18 E-value=2.5e-09 Score=111.85 Aligned_cols=172 Identities=13% Similarity=0.069 Sum_probs=126.9
Q ss_pred hHHHHHHHHHHHHhhhhHHHHHhcHHHHHHHcCCCchhH-HHHHHHHHhhhhhhhhhhhhhhh-----hhcccCchhHHH
Q 014462 193 KADFLLLFFSLVLASGSGLTVIDNLGQICQSLGYADTSI-YVSMISIWNFLGRVGGGYFSEAI-----VRKFAYPRPVAM 266 (424)
Q Consensus 193 ~~~fwll~~~~~~~~~~~~~~~~~l~~i~~~~g~s~~~~-~~sl~si~~~~gr~~~G~lsd~~-----g~k~~~~r~~~l 266 (424)
+++.+.++...+............+|.+.++.|.+..++ ..+..+... ++++++|.++||+ ||||. ++
T Consensus 11 ~~~~~~~~~l~~~~gl~~~~~~~~l~~~l~~~g~~~~~ig~~~~~~~~~-~~~~l~gpl~Dr~~~~~~Grrr~-----~l 84 (491)
T PRK11010 11 QPNSAILLILGFASGLPLALTSGTLQAWMTVENIDLKTIGFFSLVGQAY-VFKFLWSPLMDRYTPPFLGRRRG-----WL 84 (491)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHH-HHHHHHHHHHHcccccCCCCchH-----HH
Confidence 334444444444443344455567888889899887766 444444443 6899999999999 66543 34
Q ss_pred HHHHHHHHHHHHHHHh----chhHHHHHHHHHHHHHhhhhHhHHHHHHHHhhCcchhhHHHHHHHHHHHHHHHHHHHHHH
Q 014462 267 AVAQVVMAFALLYYAI----GWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIA 342 (424)
Q Consensus 267 ~~~~~~~~~~~ll~~~----~~~~~l~~~~~l~G~~~G~~~~~~~~~~se~fg~~~~g~~~g~~~~~~~lgs~l~~~~l~ 342 (424)
.+++++++++...++. .+.+.+.+..++.|++.+.......+++.|+++.++||+..++...+..+|..+ ++.+.
T Consensus 85 l~~~i~~~~~~~~~a~~~~~~~l~~l~~~~~l~~~~~a~~~i~~~a~~~~~~~~~~rg~~~~i~~~g~~lG~ll-g~~l~ 163 (491)
T PRK11010 85 LATQLLLLVAIAAMGFLEPGTQLRWLAALAVVIAFCSASQDIVFDAWKTDVLPAEERGAGAAISVLGYRLAMLV-SGGLA 163 (491)
T ss_pred HHHHHHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhHHHHHHHHHHHHHHHHH-HHHHH
Confidence 5666666666554433 234567777888899999999999999999999999999999999999999997 88888
Q ss_pred HHHHhh-hhhhhhhhhhhccCCCCCcccCCCCCCcccCCcchHHHHHHHHHHHHHHHHHHHH
Q 014462 343 SGIYDY-YAEKQAGLLWKYNGNMLPVSFRDQETPTCLGSICYSITCGIMAGLCIIAMVMSLI 403 (424)
Q Consensus 343 g~l~d~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~g~~c~~~~f~i~a~~~~~~~~l~~~ 403 (424)
+.+.+. .+ ||.+|++.+++.++..+..+.
T Consensus 164 ~~l~~~~~G--------------------------------Wr~~f~i~a~l~ll~~l~~~~ 193 (491)
T PRK11010 164 LWLADRYLG--------------------------------WQGMYWLMAALLIPCIIATLL 193 (491)
T ss_pred HHHHhcccC--------------------------------HHHHHHHHHHHHHHHHHHHHh
Confidence 888873 34 999999999888877665554
No 131
>PTZ00207 hypothetical protein; Provisional
Probab=99.18 E-value=1.5e-09 Score=114.99 Aligned_cols=166 Identities=11% Similarity=0.095 Sum_probs=117.7
Q ss_pred HHHHHHHHhhhhHH--HHHhcHHHHHHHcCCCchhH--HHHHHHHHhhhhhhhhhhhhhhhhhcccCchhHHHHHHHHHH
Q 014462 198 LLFFSLVLASGSGL--TVIDNLGQICQSLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVM 273 (424)
Q Consensus 198 ll~~~~~~~~~~~~--~~~~~l~~i~~~~g~s~~~~--~~sl~si~~~~gr~~~G~lsd~~g~k~~~~r~~~l~~~~~~~ 273 (424)
.+..+.++...++. ++....+++.+++|++..+. +.++ +....++.+.+|+++||+|+|+.+ .++.++.
T Consensus 29 ~lva~~~~~~~~g~~y~fsv~s~~L~~~lgls~~~l~~i~sv-g~~~g~~~lp~G~L~Dr~G~R~vl------lig~ll~ 101 (591)
T PTZ00207 29 LLVLGAFCSICTSFMYAFNLISGAMQARYNLTQRDLSTITTV-GIAVGYFLLPYSFIYDYLGPRPIF------VLSMTVF 101 (591)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcCHHHHHHHHHH-HHHHHHHHHHHHHHHHHhCcHHHH------HHHHHHH
Confidence 44444444443443 34445677888899998764 3333 222334566789999999988655 6677777
Q ss_pred HHHHHHHHh-------chhHHHHHHHHHHHHHhhhhHhHHHHHHHHhhCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 014462 274 AFALLYYAI-------GWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIASGIY 346 (424)
Q Consensus 274 ~~~~ll~~~-------~~~~~l~~~~~l~G~~~G~~~~~~~~~~se~fg~~~~g~~~g~~~~~~~lgs~l~~~~l~g~l~ 346 (424)
+++.++.+. .+.+.+++..++.|++.+..++....++.++|| ++||.+.|+...+..+|+.+++++..+.+.
T Consensus 102 ~iG~ll~ala~~~~i~~s~~~l~l~r~l~G~G~~~~~~~~~~~i~~~Fp-~~RG~a~Gi~~~~~gLGsaI~~~l~~~l~~ 180 (591)
T PTZ00207 102 CLGTLLFALTFQEVIEGSVVRLSVYNGLMTLGCMLFDLGAVVTVLSVFP-SNRGAVVAIMKTFTGLGSAILGSIQLAFFS 180 (591)
T ss_pred HHHHHHHHHHhcccccCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCh-hhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 777766553 256678888999999998888888889999996 788999999999999999986665555443
Q ss_pred hhhhhhhhhhhhhccCCCCCcccCCCCCCcccCCcchHHHHHHHHHHHHHHHHHHHHHh
Q 014462 347 DYYAEKQAGLLWKYNGNMLPVSFRDQETPTCLGSICYSITCGIMAGLCIIAMVMSLIVV 405 (424)
Q Consensus 347 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~g~~c~~~~f~i~a~~~~~~~~l~~~l~ 405 (424)
.+ |+..|++++.+.++..++.+.+.
T Consensus 181 --~~--------------------------------~~~~fl~l~vl~~vv~ll~~~~v 205 (591)
T PTZ00207 181 --DN--------------------------------TSAYFFFLMSFALVVGILAIVFM 205 (591)
T ss_pred --Hh--------------------------------HHHHHHHHHHHHHHHHHHHHhhe
Confidence 22 77788888887777666655544
No 132
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=99.17 E-value=2.7e-10 Score=117.87 Aligned_cols=143 Identities=12% Similarity=0.100 Sum_probs=114.3
Q ss_pred HcCCCchhH--HHHHHHHHhhhhhhhhhhhhhhhhhcccCchhHHHHHHHHHHHHHHHHH--H-hchhHHHHHHHHHHHH
Q 014462 223 SLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVMAFALLYY--A-IGWPGEIYVTTVLVGL 297 (424)
Q Consensus 223 ~~g~s~~~~--~~sl~si~~~~gr~~~G~lsd~~g~k~~~~r~~~l~~~~~~~~~~~ll~--~-~~~~~~l~~~~~l~G~ 297 (424)
++|++.... +.+.+.++..++.+.+|+++||+|+|+.+ ..+.++.+++.++. + ..+...+++..++.|+
T Consensus 70 ~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~l------~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~~~G~ 143 (465)
T TIGR00894 70 NFKWSGALQGLILSSHFYGQIIIQIPVGYLAGKYVFKWSI------GIGMFLSSVISIVIPWAAGGGIALVVFCRVIQGL 143 (465)
T ss_pred CCCCCHHHhhHHHHHHHHHHHHHHcchHHHHHHhCcchhh------HHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHH
Confidence 456665543 88899999999999999999999998765 44444444444433 2 2234567888999999
Q ss_pred HhhhhHhHHHHHHHHhhCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhh-hhhhhhhhhhccCCCCCcccCCCCCCc
Q 014462 298 SYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIASGIYDYY-AEKQAGLLWKYNGNMLPVSFRDQETPT 376 (424)
Q Consensus 298 ~~G~~~~~~~~~~se~fg~~~~g~~~g~~~~~~~lgs~l~~~~l~g~l~d~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 376 (424)
+.|..++....+++|++|.++||+..++...+..+|..+ ++.+.+.+.+.. +
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~i-~~~l~~~l~~~~~g-------------------------- 196 (465)
T TIGR00894 144 AQGSVSPATHKIIVKWAPPKERSRLLGMSTSGFQLGTFI-FLPISGWLCESWGG-------------------------- 196 (465)
T ss_pred hcccchhhHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhccCC--------------------------
Confidence 999999999999999999999999999999999999997 899999988763 5
Q ss_pred ccCCcchHHHHHHHHHHHHHHHHHHHHH
Q 014462 377 CLGSICYSITCGIMAGLCIIAMVMSLIV 404 (424)
Q Consensus 377 c~g~~c~~~~f~i~a~~~~~~~~l~~~l 404 (424)
|+.+|++.+++.++..++...+
T Consensus 197 ------w~~~f~i~~~~~~~~~~~~~~~ 218 (465)
T TIGR00894 197 ------WPMIFYVFGIVGCAWSLLWFVF 218 (465)
T ss_pred ------CCeehhhhhHHHHHHHHHHHHH
Confidence 9999999988776665554443
No 133
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=99.17 E-value=4e-09 Score=120.98 Aligned_cols=156 Identities=14% Similarity=0.081 Sum_probs=119.9
Q ss_pred HHHhhhhHHHHHHHHHHHHhhhhHHHHHhcHHHHHHH-cCCCchhH--HHHHHHHHhhhhhhhhhhhhhhhhhcccCchh
Q 014462 187 LPQALMKADFLLLFFSLVLASGSGLTVIDNLGQICQS-LGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRP 263 (424)
Q Consensus 187 ~~~~l~~~~fwll~~~~~~~~~~~~~~~~~l~~i~~~-~g~s~~~~--~~sl~si~~~~gr~~~G~lsd~~g~k~~~~r~ 263 (424)
++.+.+++.+|.+.+..++.......+..++|.+.++ +|.+.... +.+.++++..+|.++.|+++++..+++..+
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~g~l~~~~~~~~~~~-- 295 (1140)
T PRK06814 218 LKYAKADKRIWLAILGISWFWLVGAVVLSQLPLLAKETLGGDENVATLFLAVFSVGVAVGSFLASKLSEGRITLLYVP-- 295 (1140)
T ss_pred HHHHhcCchHHHHHHHHHHHHHHHHHHHHHhHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHHHHhCCceeeeeeh--
Confidence 4557788889998888877777777777789999876 78876543 888999999999999999998877665441
Q ss_pred HHHHHHHHHHHHHHHHHHh---------------------chhHHHHHHHHHHHHHhhhhHhHHHHHHHHhhCcchhhHH
Q 014462 264 VAMAVAQVVMAFALLYYAI---------------------GWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGAL 322 (424)
Q Consensus 264 ~~l~~~~~~~~~~~ll~~~---------------------~~~~~l~~~~~l~G~~~G~~~~~~~~~~se~fg~~~~g~~ 322 (424)
.+.++++++.+.+.. .+.+.+++..++.|++.|.......+++.+.+|.+++|+.
T Consensus 296 ----~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~G~v 371 (1140)
T PRK06814 296 ----IGALLMGLFGLDLAFASSSVPAEPAQLKSILVFLSKRHGWRILIDLFGLAAAGGLYIVPLFAALQAWANPAHRARV 371 (1140)
T ss_pred ----HHHHHHHHHHHHHHhcccccccccccccchhhhhcccccHHHHHHHHHHHHHHHHhHHHHHHHHHhhCCcccceee
Confidence 112222221111111 3445567788889999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 014462 323 YNFLTLASPAGSLIFSGVIASGIYDYY 349 (424)
Q Consensus 323 ~g~~~~~~~lgs~l~~~~l~g~l~d~~ 349 (424)
+|+.++...+|..+ ++.+.|.+++..
T Consensus 372 ~g~~~~~~~~~~~i-g~~~~g~l~~~~ 397 (1140)
T PRK06814 372 IAANNVLNAAFMVA-GTIILALLQALG 397 (1140)
T ss_pred eHHHHHHHHHHHHH-HHHHHHHHHHhc
Confidence 99999999999987 899999887643
No 134
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=99.16 E-value=1.7e-08 Score=102.48 Aligned_cols=172 Identities=12% Similarity=0.128 Sum_probs=107.7
Q ss_pred HHHhhhhHHHHHHHHHHHHhhhhHHHHH-hcHHHHHHHcCCCchhH--HHHHHH-HHhhhhhhhhhhhhhhhhhcccCch
Q 014462 187 LPQALMKADFLLLFFSLVLASGSGLTVI-DNLGQICQSLGYADTSI--YVSMIS-IWNFLGRVGGGYFSEAIVRKFAYPR 262 (424)
Q Consensus 187 ~~~~l~~~~fwll~~~~~~~~~~~~~~~-~~l~~i~~~~g~s~~~~--~~sl~s-i~~~~gr~~~G~lsd~~g~k~~~~r 262 (424)
+++.++++.+|.+.+..++......... .+.+.+.+++|++..+. +....+ +...+|.+++|++.||+++|+..
T Consensus 202 ~~~l~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~l~~~~G~~~~~~g~~~~~~~~~~~i~g~~~~g~l~~r~g~~~~l-- 279 (402)
T PRK11902 202 LRDFFSRRGAWALLLLIVLYKLGDAFAGSLSTTFLIRGAGFSAGEVGIVNKTLGLAATIVGALAGGTLMVRLGLYRSL-- 279 (402)
T ss_pred HHHHHhCcCHHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhHHHHH--
Confidence 4457888888877666555443322222 23344455689887655 333433 46789999999999999987643
Q ss_pred hHHHHHHHHHHHHH---HHHHHh--chhHHHHHHHH----HHHHHhhhhHhHHHHHHHHhhCcchhhHHHHHHHHHHHHH
Q 014462 263 PVAMAVAQVVMAFA---LLYYAI--GWPGEIYVTTV----LVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAG 333 (424)
Q Consensus 263 ~~~l~~~~~~~~~~---~ll~~~--~~~~~l~~~~~----l~G~~~G~~~~~~~~~~se~fg~~~~g~~~g~~~~~~~lg 333 (424)
.++.++..+. ..++.. .+.+.+++..+ ..|++.+...+....++++.+|.+++ ++.+....+|
T Consensus 280 ----~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~l~ 351 (402)
T PRK11902 280 ----MLFGVLQAVSNLGYWVLAVTPKHLWTMALAIGIENLCGGMGTAAFVALLMALCNRSFSATQY----ALLSALASVG 351 (402)
T ss_pred ----HHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHH----HHHHHHHHHH
Confidence 2222222222 222222 23344444443 44555666677777777777775554 4555556777
Q ss_pred HHHHHHHHHHHHHhhhhhhhhhhhhhccCCCCCcccCCCCCCcccCCcchHHHHHHHHHHHHHHHHHH
Q 014462 334 SLIFSGVIASGIYDYYAEKQAGLLWKYNGNMLPVSFRDQETPTCLGSICYSITCGIMAGLCIIAMVMS 401 (424)
Q Consensus 334 s~l~~~~l~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~g~~c~~~~f~i~a~~~~~~~~l~ 401 (424)
+.+ ++.++|.++|+.| |+..|.+.+.+++++.++.
T Consensus 352 ~~~-~~~~~G~l~~~~G--------------------------------~~~~f~~~~~~~~~~~~~~ 386 (402)
T PRK11902 352 RVY-VGPTSGYLVEAYG--------------------------------WPGFYLMTVVIALPGLALL 386 (402)
T ss_pred HHH-HHHHHHHHHHHhC--------------------------------hHHHHHHHHHHHHHHHHHH
Confidence 776 4568999999988 9999999998888876554
No 135
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.15 E-value=7.8e-10 Score=115.04 Aligned_cols=133 Identities=12% Similarity=0.139 Sum_probs=95.8
Q ss_pred HHHHhcHHHHHH-HcCCCchhH--HHHHHHHHhhhhhhhhhhhhhhhhhcccCchhHHHHHHHHHHHHHHHHHH-h--ch
Q 014462 211 LTVIDNLGQICQ-SLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVMAFALLYYA-I--GW 284 (424)
Q Consensus 211 ~~~~~~l~~i~~-~~g~s~~~~--~~sl~si~~~~gr~~~G~lsd~~g~k~~~~r~~~l~~~~~~~~~~~ll~~-~--~~ 284 (424)
.....++|.+++ ++|++..+. +.+...++..+|++..|+++||+++|+.+ .++..+..+..+++. . ..
T Consensus 292 ~~~~~~lp~~l~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~------~~~~~~~~~~~~~~~~~~~~~ 365 (496)
T PRK03893 292 WPIQALLPTYLKTDLGYDPHTVANVLFFSGFGAAVGCCVGGFLGDWLGTRKAY------VCSLLISQLLIIPVFAIGGAN 365 (496)
T ss_pred chHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHH------HHHHHHHHHHHHHHhhccccH
Confidence 345567899985 689987654 88889999999999999999999987643 233333333322222 1 12
Q ss_pred hHHHHHHHHHHHHHhhhhHhHHHHHHHHhhCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh
Q 014462 285 PGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIASGIYDYYA 350 (424)
Q Consensus 285 ~~~l~~~~~l~G~~~G~~~~~~~~~~se~fg~~~~g~~~g~~~~~~~lgs~l~~~~l~g~l~d~~~ 350 (424)
.+.+.+..++.++...+..+..+++++|.+|.+++|+.+++.+....+|+.+ +|.+.|.+.|+.+
T Consensus 366 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~l-gp~l~g~l~~~~g 430 (496)
T PRK03893 366 VWVLGLLLFFQQMLGQGISGLLPKLIGGYFDTEQRAAGLGFTYNVGALGGAL-APILGALIAQRLD 430 (496)
T ss_pred HHHHHHHHHHHHHHhcccchhhHHHHHhhCCHHHhhcccchhhhhhhHHHHH-HHHHHHHHhccCC
Confidence 2223333344444333445677889999999999999999999999999997 9999999999877
No 136
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=99.15 E-value=8.5e-10 Score=126.53 Aligned_cols=159 Identities=9% Similarity=0.056 Sum_probs=112.5
Q ss_pred HhhhhHHHHHHHHHHHHhhhhHHHHHhcHHHH-----HHHcCCCchh---HHHHHHHHHhhhhhhhhhhhhhhhhhcccC
Q 014462 189 QALMKADFLLLFFSLVLASGSGLTVIDNLGQI-----CQSLGYADTS---IYVSMISIWNFLGRVGGGYFSEAIVRKFAY 260 (424)
Q Consensus 189 ~~l~~~~fwll~~~~~~~~~~~~~~~~~l~~i-----~~~~g~s~~~---~~~sl~si~~~~gr~~~G~lsd~~g~k~~~ 260 (424)
.++++++|+.++++.++.........+.+..+ ..+.+.+... ...+++.+...+..+++|+++||++||+.+
T Consensus 6 ~l~~~~~f~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~G~laDr~~rk~~~ 85 (1140)
T PRK06814 6 YLMKSRRFAPLFWTQFFGAFNDNFLKNALVILILYGLSGALGAYNNALVTLAGAVFILPFFIFSALAGQLADKYDKAKLA 85 (1140)
T ss_pred hhhhccccHHHHHHHHHhHHHHHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHHHHHhhhHHhhhhhccHHHHH
Confidence 36788888888777776655432222222211 1122222222 255677788899999999999999998743
Q ss_pred chhHHHHHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHhhhhHhHHHHHHHHhhCcchhhHHHHHHHHHHHHHHHHHHHH
Q 014462 261 PRPVAMAVAQVVMAFALLYYAIGWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGV 340 (424)
Q Consensus 261 ~r~~~l~~~~~~~~~~~ll~~~~~~~~l~~~~~l~G~~~G~~~~~~~~~~se~fg~~~~g~~~g~~~~~~~lgs~l~~~~ 340 (424)
. ....+..+.+.++.+.+...+.+.+++..++.|++.+..++...+++.++++.++++.+.++.+++..+|..+ ||.
T Consensus 86 ~--~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~l~gi~~a~~~p~~~a~l~~~~~~~~~~~a~~~~~~~~~ig~~i-gp~ 162 (1140)
T PRK06814 86 K--ILKFAEIGIAALAIYGFHLNSVPLLFAALFLMGIHSALFGPIKYSILPDHLNKDELLGANALVEAGTFIAILL-GTI 162 (1140)
T ss_pred H--HHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhhchHHHHhhHhhcCccccchhhHHHHHHHHHHHHH-HHH
Confidence 1 1112222222222222334567889999999999999999999999999999999999999999999999997 999
Q ss_pred HHHHHHhhhh
Q 014462 341 IASGIYDYYA 350 (424)
Q Consensus 341 l~g~l~d~~~ 350 (424)
++|.+.+..+
T Consensus 163 l~g~l~~~~~ 172 (1140)
T PRK06814 163 IGGLATISGN 172 (1140)
T ss_pred HHHHHHhccc
Confidence 9999988665
No 137
>PRK09952 shikimate transporter; Provisional
Probab=99.15 E-value=4.7e-09 Score=108.12 Aligned_cols=105 Identities=18% Similarity=0.107 Sum_probs=82.9
Q ss_pred HHHHhhhhhhhhhhhhhhhhhcccCchhHHHHHHHHHHHHHHHHHHhc-hhH--------HHHHHHHHHHHHhhhhHhHH
Q 014462 236 ISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVMAFALLYYAIG-WPG--------EIYVTTVLVGLSYGAHWAIV 306 (424)
Q Consensus 236 ~si~~~~gr~~~G~lsd~~g~k~~~~r~~~l~~~~~~~~~~~ll~~~~-~~~--------~l~~~~~l~G~~~G~~~~~~ 306 (424)
..++..+|.+..|+++||+|||+.+ .++.++++++.++.+.. +.. .+++..++.|++.|+.++..
T Consensus 73 ~~~~~~~g~~~~G~l~Dr~Grr~~l------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~ 146 (438)
T PRK09952 73 GFLFRPLGGVVFGHFGDRLGRKRML------MLTVWMMGIATALIGLLPSFSTIGWWAPVLLVTLRAIQGFAVGGEWGGA 146 (438)
T ss_pred HHHHHhhHHHHHHHHHHhhccHHHH------HHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhhhcccHHHH
Confidence 3455668888899999999998765 55666666666665533 222 46778999999999999999
Q ss_pred HHHHHHhhCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 014462 307 PAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIASGIYD 347 (424)
Q Consensus 307 ~~~~se~fg~~~~g~~~g~~~~~~~lgs~l~~~~l~g~l~d 347 (424)
..+++|.+|.|+||...+....+..+|..+ ++.+.+.+..
T Consensus 147 ~~~~~e~~p~~~rg~~~~~~~~g~~~G~~l-~~~~~~~l~~ 186 (438)
T PRK09952 147 ALLAVESAPKNKKAFYSSGVQVGYGVGLLL-STGLVSLISM 186 (438)
T ss_pred HHHHHHhCCCCCCcHHHHHHHHHHHHHHHH-HHHHHHHHHH
Confidence 999999999999999999999999988876 7766666543
No 138
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=99.13 E-value=1.5e-09 Score=107.98 Aligned_cols=146 Identities=12% Similarity=0.123 Sum_probs=115.2
Q ss_pred HhcHHHHHHHcCCCchhH--HHHHHHHHhhhhhhhhhhhhhhhhhcccCchhHHHHHHHHHHHHHHHHHHhchhHHHHHH
Q 014462 214 IDNLGQICQSLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVMAFALLYYAIGWPGEIYVT 291 (424)
Q Consensus 214 ~~~l~~i~~~~g~s~~~~--~~sl~si~~~~gr~~~G~lsd~~g~k~~~~r~~~l~~~~~~~~~~~ll~~~~~~~~l~~~ 291 (424)
...+|++.+++|++..+. ..++..++..++.+..|+++||+|+|+.+ .++.++.+++.+.....+.+.+++.
T Consensus 20 ~~~lp~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~------~~~~~~~~~~~~~~~~~~~~~l~~~ 93 (355)
T TIGR00896 20 GPLLPQIRSALGMSFSVAGLLTALPVLCFAVLAPLAPWLARRFGEERSV------AAGLLLIAAGILIRSAPGTALLFAG 93 (355)
T ss_pred cccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCchHHH------HHHHHHHHHHHHHHHhccHHHHHHH
Confidence 446888999999987765 88899999999999999999999998754 4444444444444334455667788
Q ss_pred HHHHHHHhhhhHhHHHHHHHHhhCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhccCCCCCcccCC
Q 014462 292 TVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIASGIYDYYAEKQAGLLWKYNGNMLPVSFRD 371 (424)
Q Consensus 292 ~~l~G~~~G~~~~~~~~~~se~fg~~~~g~~~g~~~~~~~lgs~l~~~~l~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~ 371 (424)
.++.|++.|...+..+..+.+.++ ++++++.++.+.+..+|..+ ++.+.+.+.+..+.
T Consensus 94 ~~~~g~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~i-~~~~~~~l~~~~~~-------------------- 151 (355)
T TIGR00896 94 TALIGVGIAIINVLLPSLIKRDFP-QRVGLMTGLYSMALMGGAAL-AAAATVPLAQHSGG-------------------- 151 (355)
T ss_pred HHHHHHHHHHHhccchHHHHHhCc-chhhHHHHHHHHHHHHHHHH-HHHHHHHHHHhhhh--------------------
Confidence 889999999888888889999995 68999999999999999987 88888888765431
Q ss_pred CCCCcccCCcchHHHHHHHHHHHHHH
Q 014462 372 QETPTCLGSICYSITCGIMAGLCIIA 397 (424)
Q Consensus 372 ~~~~~c~g~~c~~~~f~i~a~~~~~~ 397 (424)
.|+..|.+.+++++++
T Consensus 152 ----------~w~~~f~~~~~~~~~~ 167 (355)
T TIGR00896 152 ----------HWQQALAWWALPALLA 167 (355)
T ss_pred ----------hHHHHHHHHHHHHHHH
Confidence 1899998887765554
No 139
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=99.12 E-value=2.8e-09 Score=108.47 Aligned_cols=158 Identities=10% Similarity=0.091 Sum_probs=104.3
Q ss_pred CHHHhhhhHHHHHHHHHHHHhhhhHHHHHhcHHHHHHHcCCCchhH--HHHHHHHHhhhhhhhhhhhhh-hhhhcccCch
Q 014462 186 TLPQALMKADFLLLFFSLVLASGSGLTVIDNLGQICQSLGYADTSI--YVSMISIWNFLGRVGGGYFSE-AIVRKFAYPR 262 (424)
Q Consensus 186 t~~~~l~~~~fwll~~~~~~~~~~~~~~~~~l~~i~~~~g~s~~~~--~~sl~si~~~~gr~~~G~lsd-~~g~k~~~~r 262 (424)
++++.+++++++...+..+...........++|.+.++.+.++.+. +.++.++....+....+...| |++.++..
T Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~r~~~~~~~-- 277 (400)
T PRK11646 200 GMTRVLRDKRFVTYVLTLTGYYMLAVQVMLMLPIMVNDIAGSPSAVKWMYAIEACLSLTLLYPIARWSEKRFRLEHRL-- 277 (400)
T ss_pred HHHHHHcCchHHHHHHHHHHHHHHHHHHHHhhhhhHHhhcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHH--
Confidence 4566888888887655544433333334557888888865554433 445555544443333344444 34333221
Q ss_pred hHHHHHHHHHHHHHHHHHH-hchhHHHHHHHHHHHHHhhhhHhHHHHHHHHhhCcchhhHHHHHHHHHHHHHHHHHHHHH
Q 014462 263 PVAMAVAQVVMAFALLYYA-IGWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVI 341 (424)
Q Consensus 263 ~~~l~~~~~~~~~~~ll~~-~~~~~~l~~~~~l~G~~~G~~~~~~~~~~se~fg~~~~g~~~g~~~~~~~lgs~l~~~~l 341 (424)
..+.++.+++.+++. ..+.+.+.+..++.|++.+...+...+.+.+..|.+++|+.+++.+....+|+.+ ||.+
T Consensus 278 ----~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~g~~~~~p~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~i-g~~l 352 (400)
T PRK11646 278 ----MAGLLIMSLSMFPIGMVSNLQQLFTLICLFYIGSIIAEPARETLSASLADARARGSYMGFSRLGLALGGAI-GYIG 352 (400)
T ss_pred ----HHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHccHHHHHHhcCCcccchhhhhHHHHHHHHHHHh-cccc
Confidence 344445555554444 2334445556677888888888888999999999999999999999999999997 9999
Q ss_pred HHHHHhhhh
Q 014462 342 ASGIYDYYA 350 (424)
Q Consensus 342 ~g~l~d~~~ 350 (424)
.|.++|..+
T Consensus 353 ~G~l~~~~~ 361 (400)
T PRK11646 353 GGWLFDLGK 361 (400)
T ss_pred hHHHHHHHh
Confidence 999999865
No 140
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.12 E-value=5.3e-09 Score=105.96 Aligned_cols=175 Identities=11% Similarity=0.027 Sum_probs=113.5
Q ss_pred hHHHHHHHHHHHHhhhhHHHHHhcHHHHH-HHcCCCchhH--HHHHHHH-HhhhhhhhhhhhhhhhhhcccCchhHHHHH
Q 014462 193 KADFLLLFFSLVLASGSGLTVIDNLGQIC-QSLGYADTSI--YVSMISI-WNFLGRVGGGYFSEAIVRKFAYPRPVAMAV 268 (424)
Q Consensus 193 ~~~fwll~~~~~~~~~~~~~~~~~l~~i~-~~~g~s~~~~--~~sl~si-~~~~gr~~~G~lsd~~g~k~~~~r~~~l~~ 268 (424)
|.+.|.+++..++...........++.+. +++|.+.++. .++...+ +..++.+.+|+ +||+|+||.+ +..
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~~~~-~dr~g~r~~~-----~~~ 87 (393)
T PRK15011 14 DLTSTAFLIVAFLTGIAGALQTPTLSIFLTDEVHARPAMVGFFFTGSAVIGILVSQFLAGR-SDKRGDRKSL-----IVF 87 (393)
T ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHH-HhcccchhHH-----HHH
Confidence 55667777777766655555556666655 5689988765 4444444 55556666676 8999998753 122
Q ss_pred HHHHHHHHHHHHHh-chhHHHHHHHHHHHHHhhhhHhHHHHHHHHhhCcchh--hHHHHHHHHHHHHHHHHHHHHHHHHH
Q 014462 269 AQVVMAFALLYYAI-GWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSF--GALYNFLTLASPAGSLIFSGVIASGI 345 (424)
Q Consensus 269 ~~~~~~~~~ll~~~-~~~~~l~~~~~l~G~~~G~~~~~~~~~~se~fg~~~~--g~~~g~~~~~~~lgs~l~~~~l~g~l 345 (424)
+.++.+++..+++. .+.+.+++...+.|...+...+....++.+..+++.+ +...++.+++.++|..+ +|.++|.+
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~-g~~i~~~l 166 (393)
T PRK15011 88 CCLLGVLACTLFAWNRNYFVLLFVGVFLSSFGSTANPQMFALAREHADKTGREAVMFSSFLRAQVSLAWVI-GPPLAYAL 166 (393)
T ss_pred HHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHHHH-hhHHHHHH
Confidence 23333344433333 3344444444444444445666667777777765544 34447888899999997 99999999
Q ss_pred HhhhhhhhhhhhhhccCCCCCcccCCCCCCcccCCcchHHHHHHHHHHHHHHHHHHHHHhh
Q 014462 346 YDYYAEKQAGLLWKYNGNMLPVSFRDQETPTCLGSICYSITCGIMAGLCIIAMVMSLIVVH 406 (424)
Q Consensus 346 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~g~~c~~~~f~i~a~~~~~~~~l~~~l~~ 406 (424)
.+..+ ||.+|++.+.++++..+..++..+
T Consensus 167 ~~~~g--------------------------------w~~~f~~~~~~~~~~~~~~~~~~~ 195 (393)
T PRK15011 167 AMGFS--------------------------------FTVMYLSAAVAFIVCGVMVWLFLP 195 (393)
T ss_pred HHhcC--------------------------------hHHHHHHHHHHHHHHHHHHHhhcC
Confidence 98777 999999999888777666554433
No 141
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=99.11 E-value=4e-09 Score=107.05 Aligned_cols=156 Identities=13% Similarity=-0.116 Sum_probs=111.8
Q ss_pred HHHhhhhHHHHHHHHHHHHhhhhHHHHHhcHHHHHH-HcCCCchhH--HHHHHHHHhhhhhhhhhhhhhhhhhcccCchh
Q 014462 187 LPQALMKADFLLLFFSLVLASGSGLTVIDNLGQICQ-SLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRP 263 (424)
Q Consensus 187 ~~~~l~~~~fwll~~~~~~~~~~~~~~~~~l~~i~~-~~g~s~~~~--~~sl~si~~~~gr~~~G~lsd~~g~k~~~~r~ 263 (424)
+++.++++++|.+.+..++............|.+.+ ++|+++.+. ......++..+|++..|+++||+++|+..
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~~r~~~~~~~--- 284 (406)
T PRK15402 208 YKLVLKNRRFVAGALALGLVSLPLLAWIALSPVILISGEQLSSYEYGLLQVPVFGALIAGNLTLARLTSRRPLRSLI--- 284 (406)
T ss_pred HHHHHcCcHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHH---
Confidence 345788899998877766665555555556777764 478887654 44556678889999999999999887644
Q ss_pred HHHHHHHHHHHHHHHHHHh------chhHHHHHHHHHHHHHhhhhHhHHHHHHHHhhCcchhhHHHHHHHHHHHHHHHHH
Q 014462 264 VAMAVAQVVMAFALLYYAI------GWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIF 337 (424)
Q Consensus 264 ~~l~~~~~~~~~~~ll~~~------~~~~~l~~~~~l~G~~~G~~~~~~~~~~se~fg~~~~g~~~g~~~~~~~lgs~l~ 337 (424)
.++.++++++.+++.. .+...+++..++.|++.|...+.......... .+++|+..++.++...+|..+
T Consensus 285 ---~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~- 359 (406)
T PRK15402 285 ---RMGLWPMVAGLLLAALATVISSHAYLWLTAGLSLYAFGIGLANAGLYRLTLFSS-DVSKGTVSAAMGMLSMLIFTV- 359 (406)
T ss_pred ---HHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHhhhHHHHHhhhc-cccccHHHHHHHHHHHHHHHH-
Confidence 3444444444443321 22345667788889998887766655554333 478999999999999999986
Q ss_pred HHHHHHHHHhhhh
Q 014462 338 SGVIASGIYDYYA 350 (424)
Q Consensus 338 ~~~l~g~l~d~~~ 350 (424)
|+.+.|.+++..+
T Consensus 360 g~~~~~~l~~~~~ 372 (406)
T PRK15402 360 GIELSKHAYLGGG 372 (406)
T ss_pred HHHHHHhcccCCc
Confidence 9999999998776
No 142
>PRK10054 putative transporter; Provisional
Probab=99.11 E-value=1.2e-09 Score=110.89 Aligned_cols=176 Identities=10% Similarity=-0.044 Sum_probs=122.5
Q ss_pred HHHhhhhHHHHHHHHHHHHhhhhHHHHHhcHHHHHHH---cCCCchh--HHHHHHHHHhhhhhhhhhhhhhhhhhcccCc
Q 014462 187 LPQALMKADFLLLFFSLVLASGSGLTVIDNLGQICQS---LGYADTS--IYVSMISIWNFLGRVGGGYFSEAIVRKFAYP 261 (424)
Q Consensus 187 ~~~~l~~~~fwll~~~~~~~~~~~~~~~~~l~~i~~~---~g~s~~~--~~~sl~si~~~~gr~~~G~lsd~~g~k~~~~ 261 (424)
.++.++++++|.+.+..++.......+..+.+++... .+.+... .+.+..++.....++..|++.||.++|+..
T Consensus 199 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l- 277 (395)
T PRK10054 199 PSVLLQDKALLWFTCSGFLASFVSGAFASCISQYVMVVADSDFAEKVVAVVLPVNAAMVVSLQYSVGRRLNAANIRPLM- 277 (395)
T ss_pred hhhhccCceehHHHHHHHHHHHHHHHhhhhHHHHHHHhcccchHHHHHHHHHHhhhhheeeehhHHHHHHccCCchhHH-
Confidence 4667889999888777766655554455566666543 2333332 255555566666777888888988776533
Q ss_pred hhHHHHHHHHHHHHHHHHHHh--chhHHHHHHHHHHHHHhhhhHhHHHHHHHHhhCcchhhHHHHHHHHHHHHHHHHHHH
Q 014462 262 RPVAMAVAQVVMAFALLYYAI--GWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSG 339 (424)
Q Consensus 262 r~~~l~~~~~~~~~~~ll~~~--~~~~~l~~~~~l~G~~~G~~~~~~~~~~se~fg~~~~g~~~g~~~~~~~lgs~l~~~ 339 (424)
..+.++++++.+.+.. .+.+.+.+..++.|++.+...+...+.+.+..|.+.+|+.++..+ ...+|..+ ||
T Consensus 278 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~p~~~~~~~~~~p~~~~~~~~~~~~-~~~~G~~~-Gp 350 (395)
T PRK10054 278 -----TAGTLCFVIGLVGFIFSGNSLLLWGMSAAVFTVGEIIYAPGEYMLIDHIAPPGMKASYFSAQS-LGWLGAAI-NP 350 (395)
T ss_pred -----HHHHHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCCcccceehHhHHH-HHHHHHHH-HH
Confidence 4455555555544442 334445667788889988888888889999999999999998765 55578887 99
Q ss_pred HHHHHHHhhhhhhhhhhhhhccCCCCCcccCCCCCCcccCCcchHHHHHHHHHHHHHHHHHHH
Q 014462 340 VIASGIYDYYAEKQAGLLWKYNGNMLPVSFRDQETPTCLGSICYSITCGIMAGLCIIAMVMSL 402 (424)
Q Consensus 340 ~l~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~g~~c~~~~f~i~a~~~~~~~~l~~ 402 (424)
.++|.++|+.+ +...|++++.+..++.++..
T Consensus 351 ~~~G~l~~~~g--------------------------------~~~~~~~~~~~~~~~~~~~~ 381 (395)
T PRK10054 351 LVSGVILTTLP--------------------------------PWSLFVILALAIVAAWLLML 381 (395)
T ss_pred HHHHHHHHHcC--------------------------------hhhHHHHHHHHHHHHHHHHH
Confidence 99999999887 77788887776665555544
No 143
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=99.11 E-value=4.6e-08 Score=99.68 Aligned_cols=188 Identities=18% Similarity=0.183 Sum_probs=130.9
Q ss_pred HHHhhhhHHHHHHHHHHHHhhhhHHHHHhcHHHHHHHcC-CCchhH--HHHHHHHHhhhhhhhhhhhhhhhhhcccCchh
Q 014462 187 LPQALMKADFLLLFFSLVLASGSGLTVIDNLGQICQSLG-YADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRP 263 (424)
Q Consensus 187 ~~~~l~~~~fwll~~~~~~~~~~~~~~~~~l~~i~~~~g-~s~~~~--~~sl~si~~~~gr~~~G~lsd~~g~k~~~~r~ 263 (424)
.++++|+|+++..++..++...+.-.+.+..+.+.++.| ++.... ..++..+.-.+.-...+++..|+|.|+.+
T Consensus 200 ~~~llk~~~~~~Fll~~~l~~~~~~~~~~f~~~yl~~~gg~~~~~~g~~~~l~~~aEi~~f~~~~~~~~r~g~~~ll--- 276 (400)
T PF03825_consen 200 ALKLLKNPRFLVFLLAAFLIGISHAAYYTFFSIYLQELGGYSGSTIGILWALGVVAEIPFFFFSGRFLKRFGIKWLL--- 276 (400)
T ss_pred HHHHhcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHH---
Confidence 346899999888777777666665556667778889988 554432 44555566666666777777777766433
Q ss_pred HHHHHHHHHHHHHHHHHHhc--hhHHHHHH----HHHHHHHhhhhHhHHHHHHHHhhCcchhhHHHHHHHH-HHHHHHHH
Q 014462 264 VAMAVAQVVMAFALLYYAIG--WPGEIYVT----TVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTL-ASPAGSLI 336 (424)
Q Consensus 264 ~~l~~~~~~~~~~~ll~~~~--~~~~l~~~----~~l~G~~~G~~~~~~~~~~se~fg~~~~g~~~g~~~~-~~~lgs~l 336 (424)
.++.+..++=..+++.. +.+..+.. -.+.|+++|..+.....++.+..|.+.++++.++.+. ...+|+.+
T Consensus 277 ---~~a~~~~~vR~~l~a~~~~~~~~~~~~~~l~q~lhG~tf~~~~~a~~~yi~~~~p~~~~at~Q~l~~~~~~Glg~~i 353 (400)
T PF03825_consen 277 ---LLALVAYAVRWLLYAYFSDPWPFIVALQLLGQLLHGLTFGLFHAASVRYIDRIAPPELRATAQGLYSALSFGLGGAI 353 (400)
T ss_pred ---HHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCccchHHHHHHHHHHHhhHHHHH
Confidence 55555555544444433 22332222 3468999999999999999999999999999999776 57899997
Q ss_pred HHHHHHHHHHhhhhhhhhhhhhhccCCCCCcccCCCCCCcccCCcchHHHHHHHHHHHHHHHHHHHHHhhh
Q 014462 337 FSGVIASGIYDYYAEKQAGLLWKYNGNMLPVSFRDQETPTCLGSICYSITCGIMAGLCIIAMVMSLIVVHR 407 (424)
Q Consensus 337 ~~~~l~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~g~~c~~~~f~i~a~~~~~~~~l~~~l~~~ 407 (424)
|..++|+++|+.+.+.. --|...+.+.+++.++..++.+++.++
T Consensus 354 -G~~igG~l~~~~g~~~~--------------------------~~~~~~~~v~a~~~~~~~~~f~~~fk~ 397 (400)
T PF03825_consen 354 -GSLIGGWLYDAFGARGM--------------------------FDWSAVFLVFAVMALVILVLFVILFKP 397 (400)
T ss_pred -HHHHHHHHHHHhcchhh--------------------------hhHHHHHHHHHHHHHHHHHHHHhhccC
Confidence 99999999999874321 015566777777766666666555444
No 144
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=99.11 E-value=5.3e-09 Score=106.23 Aligned_cols=151 Identities=17% Similarity=0.133 Sum_probs=114.4
Q ss_pred HHHhcHHHHHHHcCCCchhH-HHHHHHHHhhhhhhhhhhhhhhh-----hhcccCchhHHHHHHHHHHHHHHHHHHhc--
Q 014462 212 TVIDNLGQICQSLGYADTSI-YVSMISIWNFLGRVGGGYFSEAI-----VRKFAYPRPVAMAVAQVVMAFALLYYAIG-- 283 (424)
Q Consensus 212 ~~~~~l~~i~~~~g~s~~~~-~~sl~si~~~~gr~~~G~lsd~~-----g~k~~~~r~~~l~~~~~~~~~~~ll~~~~-- 283 (424)
....-+|.++++.|++.+++ +++..... .+.++++|+++||+ ||||.+ +.++.++++++...++..
T Consensus 17 ~~~~~~~~~l~~~g~~~~~ig~~~~~~~~-~~~~~l~g~~~Dr~~~~~~g~rr~~-----l~~~~~~~~l~~~~l~~~~~ 90 (402)
T PRK11902 17 LTSGTLQAWMTVEGLDIQTIGFFSLVGQA-YIFKFLWAPLMDRYTPPLLGRRRGW-----LLLTQVGLAASIAAMAFCPP 90 (402)
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHHHH-HHHHHHHHHHHHcccccCCCcchhH-----HHHHHHHHHHHHHHHHhcCc
Confidence 34557889999999998877 44444443 58899999999999 665532 345555555554444332
Q ss_pred --hhHHHHHHHHHHHHHhhhhHhHHHHHHHHhhCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhh-hhhhhhhhhhc
Q 014462 284 --WPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIASGIYDYY-AEKQAGLLWKY 360 (424)
Q Consensus 284 --~~~~l~~~~~l~G~~~G~~~~~~~~~~se~fg~~~~g~~~g~~~~~~~lgs~l~~~~l~g~l~d~~-~~~~~~~~~~~ 360 (424)
+.+.+++..++.+++.+...+...+++.|++++|+|++..++...+..+|..+ ++.+.+.+.+.. +
T Consensus 91 ~~~~~~l~~~~~~~~~~~~~~~~~~~al~~~~~~~~~r~~~~~~~~~g~~~g~i~-g~~l~~~l~~~~~g---------- 159 (402)
T PRK11902 91 HAALWPLAGLAVLVAFLSASQDIVFDAYSTDVLHPEERGAGAAVKVLGYRLAMLV-SGGLALWLADRVLG---------- 159 (402)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhhHHHHHHHHHHHHHHHH-HhHHHHHHHhcccC----------
Confidence 23445666667788888888899999999999999999999999999999987 888888888753 4
Q ss_pred cCCCCCcccCCCCCCcccCCcchHHHHHHHHHHHHHHHHHH
Q 014462 361 NGNMLPVSFRDQETPTCLGSICYSITCGIMAGLCIIAMVMS 401 (424)
Q Consensus 361 ~~~~~~~~~~~~~~~~c~g~~c~~~~f~i~a~~~~~~~~l~ 401 (424)
|+..|++.+.+.++..+..
T Consensus 160 ----------------------w~~~f~i~a~~~l~~~l~~ 178 (402)
T PRK11902 160 ----------------------WGNTYLLMAGLMLAGALTT 178 (402)
T ss_pred ----------------------HHHHHHHHHHHHHHHHHHH
Confidence 9999999998877665543
No 145
>PRK10133 L-fucose transporter; Provisional
Probab=99.10 E-value=6.5e-09 Score=107.19 Aligned_cols=145 Identities=15% Similarity=0.047 Sum_probs=113.8
Q ss_pred HHHHHHHHHHHhhhhHHHHHhcHHHHHHHcCCCchhH--HHHHHHHHhhhhhhhhhhhhhhhhhcccCchhHHHHHHHHH
Q 014462 195 DFLLLFFSLVLASGSGLTVIDNLGQICQSLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVV 272 (424)
Q Consensus 195 ~fwll~~~~~~~~~~~~~~~~~l~~i~~~~g~s~~~~--~~sl~si~~~~gr~~~G~lsd~~g~k~~~~r~~~l~~~~~~ 272 (424)
.++.+++.++............+|++.+++|.++.+. ..+.+.++..++.+..|.+.||+|||+.+ .++.++
T Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~p~i~~~~~~s~~~~gl~~~~~~~g~~i~~~~~g~l~dr~G~r~~l------~~g~~~ 100 (438)
T PRK10133 27 PFALLCSLFFLWAVANNLNDILLPQFQQAFTLTNFQAGLIQSAFYFGYFIIPIPAGILMKKLSYKAGI------ITGLFL 100 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHH------HHHHHH
Confidence 4455555555555555555667888888899988765 88899999999999999999999999765 666777
Q ss_pred HHHHHHHH---H-hchhHHHHHHHHHHHHHhhhhHhHHHHHHHHhhCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 014462 273 MAFALLYY---A-IGWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIASGIY 346 (424)
Q Consensus 273 ~~~~~ll~---~-~~~~~~l~~~~~l~G~~~G~~~~~~~~~~se~fg~~~~g~~~g~~~~~~~lgs~l~~~~l~g~l~ 346 (424)
++++.+++ . ..+...+++..++.|++.|..++.....+.+..+.++++...++.+....+|..+ ++.+.+.+.
T Consensus 101 ~~~~~~l~~~~~~a~~~~~ll~~r~l~G~g~g~~~~~~~~~v~~~~~~~~~~~~~s~~~~~~~~G~~~-g~~~g~~l~ 177 (438)
T PRK10133 101 YALGAALFWPAAEIMNYTLFLVGLFIIAAGLGCLETAANPFVTVLGPESSGHFRLNLAQTFNSFGAII-AVVFGQSLI 177 (438)
T ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCChhhHHHHHHHHHHHHHHHHHH-HHHHHHHHH
Confidence 77776554 2 3456678889999999999999999999999876666666789999999999997 888776544
No 146
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.10 E-value=1.4e-08 Score=116.32 Aligned_cols=153 Identities=15% Similarity=0.082 Sum_probs=116.2
Q ss_pred HHHhhhhHHHHHHHHHHHHhhhhHHHHHhcHHHHHHH-cCCCch-hH--HHHHHHHHhhhhhhhhhhhhhhhhhcccCch
Q 014462 187 LPQALMKADFLLLFFSLVLASGSGLTVIDNLGQICQS-LGYADT-SI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPR 262 (424)
Q Consensus 187 ~~~~l~~~~fwll~~~~~~~~~~~~~~~~~l~~i~~~-~g~s~~-~~--~~sl~si~~~~gr~~~G~lsd~~g~k~~~~r 262 (424)
++.+++++.+|...+..++.......+..++|.+.++ +|++.. .. +.+...++.++|.+++|+++||+++++.+
T Consensus 225 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~g~~~~~~~ig~~~g~~~~g~l~~r~~~~~~~-- 302 (1146)
T PRK08633 225 LKLLRSDRVLWLAIIGLSYFWFISQLAQANFPAYAKEVLGLDNTFQVQYLLAASAIGIGIGSLLAGRLSGRHIELGLV-- 302 (1146)
T ss_pred HHHHhcCcHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhCCceEccch--
Confidence 3447778888887777666666666666778888755 788866 43 77888899999999999999999877644
Q ss_pred hHHHHHHHHHHHHHHHHHH-hchhHHHHHHHHHHHHHhhhhHhHHHHHHHHhhCcchhhHHHHHHHHHHHHHHHHHHHHH
Q 014462 263 PVAMAVAQVVMAFALLYYA-IGWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVI 341 (424)
Q Consensus 263 ~~~l~~~~~~~~~~~ll~~-~~~~~~l~~~~~l~G~~~G~~~~~~~~~~se~fg~~~~g~~~g~~~~~~~lgs~l~~~~l 341 (424)
.++.++++++.+++. ..+.+.+++..++.|++.|...+...+++.+.+|.+.+|+.+++.++...+|+.+ ++.+
T Consensus 303 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~rg~~~~~~~~~~~lg~~~-~~~~ 377 (1146)
T PRK08633 303 ----PLGALGLALSLFLLPTAPSLASVLVLFFLFGFSAGLFIVPLNALIQFRAPEKELGKVLAANNFLQNVGMLL-FLAL 377 (1146)
T ss_pred ----hHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHhhHHHHHHHhhcCCccchhhhhHHHHHHHHHHHHH-HHHH
Confidence 344445555544443 3345566677888999999999899999999999999999999999999999876 6665
Q ss_pred HHHHH
Q 014462 342 ASGIY 346 (424)
Q Consensus 342 ~g~l~ 346 (424)
.+.+.
T Consensus 378 ~~~l~ 382 (1146)
T PRK08633 378 TTLFS 382 (1146)
T ss_pred HHHHH
Confidence 55443
No 147
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=99.09 E-value=2.4e-08 Score=99.64 Aligned_cols=150 Identities=17% Similarity=0.094 Sum_probs=104.8
Q ss_pred HHhhhhHHHHHHHHHHHHhhhhHHHHHhcHHHHHH-HcCCCchhH--HHHHHHHHhhhhhhhhhhhhhhhhhcccCchhH
Q 014462 188 PQALMKADFLLLFFSLVLASGSGLTVIDNLGQICQ-SLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPV 264 (424)
Q Consensus 188 ~~~l~~~~fwll~~~~~~~~~~~~~~~~~l~~i~~-~~g~s~~~~--~~sl~si~~~~gr~~~G~lsd~~g~k~~~~r~~ 264 (424)
++.++++++|...+...+..........+.|.+.+ ++|+++.+. +.+...++..+++++.|++.||+++|+..
T Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~---- 275 (385)
T TIGR00710 200 LLLLKSKMFWGYALIYGASFGGFFAFFSGAPFVYIDIMGVSPSVFGLLFALNIIAMIFGGFLNGRFIKKWGAKSLL---- 275 (385)
T ss_pred HHHHcCchhHHHHHHHHHHHHHHHHHHHcChHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHH----
Confidence 34677888888777666665556666667787776 588887654 67778899999999999999999987644
Q ss_pred HHHHHHHHHHHHHHHHHh------chhHHHHHHHHHHHHHhhhhHhHHHHHHHHhhCcchhhHHHHHHHHHHHHHHHHHH
Q 014462 265 AMAVAQVVMAFALLYYAI------GWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFS 338 (424)
Q Consensus 265 ~l~~~~~~~~~~~ll~~~------~~~~~l~~~~~l~G~~~G~~~~~~~~~~se~fg~~~~g~~~g~~~~~~~lgs~l~~ 338 (424)
..+..++.++.+++.. .....++...++.|++.+...+.......|.+| +++|++.++.+.....++.+.
T Consensus 276 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~g~i~- 351 (385)
T TIGR00710 276 --RMGLILFAVSAVLLEITAILGLGSWAMIIGPMMFVGIGNSMISSIAMAYALEDFP-HVAGTASALFGTLRLVLGAIV- 351 (385)
T ss_pred --HHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHhccCc-ccchHHHHHHHHHHHHHHHHH-
Confidence 3333333333333221 112234555677889999888888889899886 678999999888776666653
Q ss_pred HHHHHHH
Q 014462 339 GVIASGI 345 (424)
Q Consensus 339 ~~l~g~l 345 (424)
+.+.|.+
T Consensus 352 ~~~~~~~ 358 (385)
T TIGR00710 352 GYLVSLI 358 (385)
T ss_pred HHHHHhc
Confidence 4455633
No 148
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=99.08 E-value=7.9e-09 Score=108.26 Aligned_cols=110 Identities=17% Similarity=0.207 Sum_probs=89.7
Q ss_pred HHHHHHHHHhhhhhhhhhhhhhhhhhcccCchhHHHHHHHHHHHHHHHHHHh-ch------hHHHHHHHHHHHHHhhhhH
Q 014462 231 IYVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVMAFALLYYAI-GW------PGEIYVTTVLVGLSYGAHW 303 (424)
Q Consensus 231 ~~~sl~si~~~~gr~~~G~lsd~~g~k~~~~r~~~l~~~~~~~~~~~ll~~~-~~------~~~l~~~~~l~G~~~G~~~ 303 (424)
.+.+...++..+|.+.+|+++||+|||+.+ .++.+++.++.++... .+ ...+++..++.|++.|..+
T Consensus 60 ~~~~~~~ig~~ig~~~~g~l~d~~Grr~~~------~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~ 133 (502)
T TIGR00887 60 AVNGSASIGTLAGQLFFGWLADKLGRKRVY------GMELIIMIIATVASGLSPGSSPKSVMATLCFWRFWLGVGIGGDY 133 (502)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhccHHHH------HHHHHHHHHHHHHHHHccCcccchHHHHHHHHHHHHHHHHhhhh
Confidence 388889999999999999999999998755 4444444444444332 11 3568889999999999999
Q ss_pred hHHHHHHHHhhCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 014462 304 AIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIASGIYD 347 (424)
Q Consensus 304 ~~~~~~~se~fg~~~~g~~~g~~~~~~~lgs~l~~~~l~g~l~d 347 (424)
+..+.+++|.+|.++||+..++......+|..+ ++.+...+..
T Consensus 134 ~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~g~~~-g~~~~~~~~~ 176 (502)
T TIGR00887 134 PLSAIITSEFATKKWRGAMMAAVFAMQGFGILA-GAIVALIVLA 176 (502)
T ss_pred HHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHH-HHHHHHHHHH
Confidence 999999999999999999999999999999986 8877775543
No 149
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=99.07 E-value=9.1e-10 Score=112.10 Aligned_cols=172 Identities=21% Similarity=0.296 Sum_probs=143.2
Q ss_pred HHHHHHHHHHHhhhhHHHHHhcHHHHHH-HcC----CCchhH--HHHHHHHHhhhhhhhhhhhhhhh-hhcccCchhHHH
Q 014462 195 DFLLLFFSLVLASGSGLTVIDNLGQICQ-SLG----YADTSI--YVSMISIWNFLGRVGGGYFSEAI-VRKFAYPRPVAM 266 (424)
Q Consensus 195 ~fwll~~~~~~~~~~~~~~~~~l~~i~~-~~g----~s~~~~--~~sl~si~~~~gr~~~G~lsd~~-g~k~~~~r~~~l 266 (424)
.+|+++..-++=-++.+++---+..++. +.+ ++++++ .++.++..-.+..+++||++||+ |+|+.+
T Consensus 22 ~l~~if~vE~WERFsyYGmraiL~~Yl~~~~~~gLg~~~~~A~~l~~~y~slVY~t~i~GG~laDr~LG~~~tI------ 95 (498)
T COG3104 22 GLYLIFFVELWERFSYYGMRAILILYLYYQLGDGLGFDETHATGLFSAYGSLVYLTPIIGGWLADRVLGTRRTI------ 95 (498)
T ss_pred hHHHHHHHHHHHHHhhhhhHHHHHHHHHHhccccCCcChHhhHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHH------
Confidence 5788888888888888877665555543 344 887665 88888888889999999999998 677665
Q ss_pred HHHHHHHHHHHHHHHhc---hhHHHHHHHHHHHHHhhhhHhHHHHHHHHhhCcch--hhHHHHHHHHHHHHHHHHHHHHH
Q 014462 267 AVAQVVMAFALLYYAIG---WPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKS--FGALYNFLTLASPAGSLIFSGVI 341 (424)
Q Consensus 267 ~~~~~~~~~~~ll~~~~---~~~~l~~~~~l~G~~~G~~~~~~~~~~se~fg~~~--~g~~~g~~~~~~~lgs~l~~~~l 341 (424)
..+.+++++++++++.. .+..++++.+++++|+|..=+-...++.|++|+++ |-..+++..++.++|+++ +|.+
T Consensus 96 ~lGail~~iGh~~L~~~~~~~~~gl~i~L~~I~iG~Gl~K~NiS~llg~ly~~~DprrD~gFt~fY~~iNiGsl~-~p~i 174 (498)
T COG3104 96 VLGAILMAIGHLVLAISSVSGPGGLYIGLALIIVGTGLFKPNISSLLGELYPKDDPRRDGGFTLFYMGINIGSLI-APII 174 (498)
T ss_pred HHHHHHHHHHHHHHhccccccccHHHHHHHHHHhccccccccHHHHHHHhcCCCCcccCCCccEEEEEeehHHHH-HHHH
Confidence 78889999999998754 46689999999999999999999999999998764 677888899999999997 9999
Q ss_pred HHHHHhhhhhhhhhhhhhccCCCCCcccCCCCCCcccCCcchHHHHHHHHHHHHHHHHHHHHHh
Q 014462 342 ASGIYDYYAEKQAGLLWKYNGNMLPVSFRDQETPTCLGSICYSITCGIMAGLCIIAMVMSLIVV 405 (424)
Q Consensus 342 ~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~g~~c~~~~f~i~a~~~~~~~~l~~~l~ 405 (424)
.+++.++.+ |+..|...+.-..++.+..++.+
T Consensus 175 ~~~~~~~~g--------------------------------~~~gF~~aavGm~~gl~~f~~~~ 206 (498)
T COG3104 175 TGLLAINYG--------------------------------WHVGFGLAAVGMIIGLVIFLLGR 206 (498)
T ss_pred HHHHHHhhC--------------------------------HHHHHHHHHHHHHHHHHHHHHcc
Confidence 999988877 99999999988888877766654
No 150
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.06 E-value=4.8e-09 Score=120.17 Aligned_cols=153 Identities=14% Similarity=0.162 Sum_probs=112.9
Q ss_pred HhhhhHHHHHHHHHHHHhhhhHHHHHhcH-HHHHHHcCCCchh----HHHHHHHHHhhhhhhhhhhhhhhhhhcccCchh
Q 014462 189 QALMKADFLLLFFSLVLASGSGLTVIDNL-GQICQSLGYADTS----IYVSMISIWNFLGRVGGGYFSEAIVRKFAYPRP 263 (424)
Q Consensus 189 ~~l~~~~fwll~~~~~~~~~~~~~~~~~l-~~i~~~~g~s~~~----~~~sl~si~~~~gr~~~G~lsd~~g~k~~~~r~ 263 (424)
..++++.|+.++++.++.......+...+ +.+..+++.+... +..+++.++..++.+.+|+++||+|||+.+
T Consensus 4 ~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~G~l~Dr~grk~~l--- 80 (1146)
T PRK08633 4 NLLKIIGFLPLLLTQFLNAFNDLGHKILIQNTLIKAYDGSEQVILTAIVNALFLLPFLLLSSPAGFLADKFSKNRVI--- 80 (1146)
T ss_pred chhhhhhhHHHHHHHHHhHHHHHHHHHHHHHHHHHHcCcccHHHHHHHHHHHHHHHHHHHhhhHhhhcccccHHHHH---
Confidence 36778888888877777655444333333 3333445554332 267788888999999999999999998754
Q ss_pred HHHHHHHHHHHHHHH----HHHhchhHHHHHHHHHHHHHhhhhHhHHHHHHHHhhCcchhhHHHHHHHHHHHHHHHHHHH
Q 014462 264 VAMAVAQVVMAFALL----YYAIGWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSG 339 (424)
Q Consensus 264 ~~l~~~~~~~~~~~l----l~~~~~~~~l~~~~~l~G~~~G~~~~~~~~~~se~fg~~~~g~~~g~~~~~~~lgs~l~~~ 339 (424)
..+.++.++..+ .....+.+.+++..++.|++.|..++...++++|+++.++++++.++..++..+|..+ |+
T Consensus 81 ---~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~ig~~l-g~ 156 (1146)
T PRK08633 81 ---RIVKLFEVGLTLLIVLAYYLGWFWLAFAVTFLLGAQSAIYSPAKYGIIPELVGKENLSRANGLLEAFTIVAILA-GT 156 (1146)
T ss_pred ---HHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHhhchHHHhhhHHhcCcccchhhhhHHHHHHHHHHHH-HH
Confidence 222222221111 1123456778889999999999999999999999999999999999999999999987 99
Q ss_pred HHHHHHHhh
Q 014462 340 VIASGIYDY 348 (424)
Q Consensus 340 ~l~g~l~d~ 348 (424)
.++|.+.+.
T Consensus 157 ~l~~~l~~~ 165 (1146)
T PRK08633 157 ALFSFLFES 165 (1146)
T ss_pred HHHHHHHHh
Confidence 999988875
No 151
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=99.06 E-value=9.7e-09 Score=100.75 Aligned_cols=179 Identities=11% Similarity=0.018 Sum_probs=133.0
Q ss_pred CHHHhhhhHHHHHHHHHHHHhhhhHHHHHhcHHHHHHHcCCCchhH--HHHHHHHHhhhhhhhhhhhhhhhhhcccCchh
Q 014462 186 TLPQALMKADFLLLFFSLVLASGSGLTVIDNLGQICQSLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRP 263 (424)
Q Consensus 186 t~~~~l~~~~fwll~~~~~~~~~~~~~~~~~l~~i~~~~g~s~~~~--~~sl~si~~~~gr~~~G~lsd~~g~k~~~~r~ 263 (424)
+-..+++++.-|.+.+.+-+.....+.++.|+|+|+.|+|+|+.++ ++++..+......+....+.+|...+|..
T Consensus 200 ~~~~vw~~~~aW~vtLfmGlqS~~~Y~~~~WLP~ili~~G~sa~~aG~llsl~~l~~~~~~ll~P~la~R~~n~r~~--- 276 (395)
T COG2807 200 SVRKVWRSPLAWQVTLFMGLQSLLYYIVIGWLPAILIDRGLSAAEAGSLLSLMQLAQLPTALLIPLLARRSKNQRPL--- 276 (395)
T ss_pred cccccccCchhHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCHHHhhhHHHHHHHHHHHHHHHHHHHHHHhcccchH---
Confidence 3455899999999998888889999999999999999999998765 99999999999999999999985544422
Q ss_pred HHHHHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHhhhhHhHHHHHHHHhhCc-chhhHHHHHHHHHHHHHHHHHHHHHH
Q 014462 264 VAMAVAQVVMAFALLYYAIGWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGL-KSFGALYNFLTLASPAGSLIFSGVIA 342 (424)
Q Consensus 264 ~~l~~~~~~~~~~~ll~~~~~~~~l~~~~~l~G~~~G~~~~~~~~~~se~fg~-~~~g~~~g~~~~~~~lgs~l~~~~l~ 342 (424)
.....+++.++..-+...+....+...++.|++.|+.++..-..+..-... +.-+...++....+.+=..+ ||.+.
T Consensus 277 --~~~~~~~~l~G~~G~~~~P~~~~~lw~~llG~G~G~~F~laL~li~~rs~~a~~Aa~LSgmaQg~GYllAa~-GP~l~ 353 (395)
T COG2807 277 --VVLALLLMLVGLVGLLLAPGQLPILWALLLGLGQGGAFPLALTLILLRSSDAAIAAALSGMAQGVGYLLAAF-GPWLF 353 (395)
T ss_pred --HHHHHHHHHHHHHHHHHhhhhHHHHHHHHHhCccchHHHHHHHHHHhhcCChHHHHHHHHHhhhhhHHHHhh-hhhhH
Confidence 233334444444444333333333446899999999999888888777643 33456666666555555564 99999
Q ss_pred HHHHhhhhhhhhhhhhhccCCCCCcccCCCCCCcccCCcchHHHHHHHHHHHHHHHHHH
Q 014462 343 SGIYDYYAEKQAGLLWKYNGNMLPVSFRDQETPTCLGSICYSITCGIMAGLCIIAMVMS 401 (424)
Q Consensus 343 g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~g~~c~~~~f~i~a~~~~~~~~l~ 401 (424)
|+++|..| +|+..+...+...++..+.-
T Consensus 354 G~lhDa~g-------------------------------sw~~~~~~l~~~~i~m~i~G 381 (395)
T COG2807 354 GFLHDATG-------------------------------SWSAPLVLLALATLLMLIFG 381 (395)
T ss_pred hHHHHhcC-------------------------------ChHHHHHHHHHHHHHHHHHH
Confidence 99999988 39999888887666554443
No 152
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=99.06 E-value=9.4e-09 Score=97.53 Aligned_cols=151 Identities=18% Similarity=0.082 Sum_probs=121.2
Q ss_pred hHHHHHHHHHHHHhhhhHHHHHhcHHHHHHH-cCCCchhH--HHHHHHHHhhhhhhhhhhhhhhhhhcccCchhHHHHHH
Q 014462 193 KADFLLLFFSLVLASGSGLTVIDNLGQICQS-LGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVA 269 (424)
Q Consensus 193 ~~~fwll~~~~~~~~~~~~~~~~~l~~i~~~-~g~s~~~~--~~sl~si~~~~gr~~~G~lsd~~g~k~~~~r~~~l~~~ 269 (424)
.+.||++++..++...+.+-++..-|.+.++ +|+|+.++ +.+.....+++-.+..|.++|++|++-. +...+
T Consensus 263 ~ppfw~~~iicv~yyva~fPFi~lg~~fF~~rfGlS~~~a~~i~s~vy~Isav~spvfg~i~Dk~G~n~~-----wv~~a 337 (459)
T KOG4686|consen 263 YPPFWVLVIICVLYYVAWFPFITLGPMFFQKRFGLSAVSAGNILSTVYGISAVLSPVFGAISDKYGFNLW-----WVASA 337 (459)
T ss_pred CccHHHHHHHHHHHHHHHHHHhhhhHHHHHHhhCCChhhccchhhhhhhhhhhhhhhHHHhHhhhcceeh-----hHHHH
Confidence 6789999998888777666666555555655 79997654 7888888888999999999999998743 34555
Q ss_pred HHHHHHHHHHHHhchhHHHHHHHHHHHHHhhhhHhHHHHHHHHhhCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 014462 270 QVVMAFALLYYAIGWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIASGIYDYY 349 (424)
Q Consensus 270 ~~~~~~~~ll~~~~~~~~l~~~~~l~G~~~G~~~~~~~~~~se~fg~~~~g~~~g~~~~~~~lgs~l~~~~l~g~l~d~~ 349 (424)
.+....++..+.+. .+.-|+.+.+.|+.+.......+..++.+.|.++.|++||++.....+|-.+ .|+++|.+.|..
T Consensus 338 ~~~tl~~H~~l~Ft-~lsPy~~m~~lGLsysllAcslWP~va~~vpE~qLGTaygf~qsIqNLgla~-i~Iiag~i~d~~ 415 (459)
T KOG4686|consen 338 CILTLLGHSGLFFT-FLSPYTSMTFLGLSYSLLACSLWPCVASLVPEEQLGTAYGFIQSIQNLGLAF-IPIIAGFIADGD 415 (459)
T ss_pred HHHHHHHhhhHHhh-hccHHHHHHHHhhhHHHHHHHHhhhhhhhCCHHHhcchHHHHHHHHhhhhhH-HhhhhheeecCC
Confidence 66666777665432 2334678889999999888888999999999999999999999999999997 799999999877
Q ss_pred h
Q 014462 350 A 350 (424)
Q Consensus 350 ~ 350 (424)
|
T Consensus 416 g 416 (459)
T KOG4686|consen 416 G 416 (459)
T ss_pred C
Confidence 6
No 153
>PRK10133 L-fucose transporter; Provisional
Probab=99.06 E-value=5.9e-09 Score=107.52 Aligned_cols=155 Identities=12% Similarity=0.081 Sum_probs=113.7
Q ss_pred HHHhhhhHHHHHHHHHHHHhhhhHHHHHhcHHHHH-HH-cCCCchhH--HHHHHHHHhhhhhhhhhhhhhhhhhcccCch
Q 014462 187 LPQALMKADFLLLFFSLVLASGSGLTVIDNLGQIC-QS-LGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPR 262 (424)
Q Consensus 187 ~~~~l~~~~fwll~~~~~~~~~~~~~~~~~l~~i~-~~-~g~s~~~~--~~sl~si~~~~gr~~~G~lsd~~g~k~~~~r 262 (424)
.++.++++.+|...+..++..+...+..++.+.++ ++ +|+++... ..+...++.++||+.+|++.||+++|+..
T Consensus 251 ~~~ll~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~g~s~~~ag~~~~~~~~~~~vG~~~~g~l~~r~g~~~~l-- 328 (438)
T PRK10133 251 LSRLARIRHWRWAVLAQFCYVGAQTACWSYLIRYAVEEIPGMTAGFAANYLTGTMVCFFIGRFTGTWLISRFAPHKVL-- 328 (438)
T ss_pred HHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHH--
Confidence 45788999999887777777777666667777774 54 78887654 88899999999999999999999987644
Q ss_pred hHHHHHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHhhhhHhHHHHHHHHhhCcchhhHHHHHHHHHHHHHHHHHHHHHH
Q 014462 263 PVAMAVAQVVMAFALLYYAIGWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIA 342 (424)
Q Consensus 263 ~~~l~~~~~~~~~~~ll~~~~~~~~l~~~~~l~G~~~G~~~~~~~~~~se~fg~~~~g~~~g~~~~~~~lgs~l~~~~l~ 342 (424)
..+.++.++++++.........+...++.|++.|..++...+...+.+|. +-+.+.++..+ ..+|+.+ +|.+.
T Consensus 329 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~l~glg~~~i~P~~~s~a~~~~~~-~~~~as~l~~~-~~~g~~~-~~~i~ 401 (438)
T PRK10133 329 ----AAYALIAMALCLISAFAGGHVGLIALTLCSAFMSIQYPTIFSLGIKNLGQ-DTKYGSSFIVM-TIIGGGI-VTPVM 401 (438)
T ss_pred ----HHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHHHHHcccch-hhccchhHHhH-HhccchH-HHHHH
Confidence 33333333333332222222234567889999999999999999999964 56778887765 4467776 68999
Q ss_pred HHHHhhhh
Q 014462 343 SGIYDYYA 350 (424)
Q Consensus 343 g~l~d~~~ 350 (424)
|.+.|..+
T Consensus 402 G~l~~~~g 409 (438)
T PRK10133 402 GFVSDAAG 409 (438)
T ss_pred HHHHHhcc
Confidence 99988765
No 154
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=99.06 E-value=6.6e-09 Score=109.26 Aligned_cols=156 Identities=13% Similarity=0.136 Sum_probs=119.8
Q ss_pred HHhhhhHHHHHHHHHHHHhhhhHHHHHhcHHHHHHHcCCCchhH--HHHHHHHHhhhhhhhhhhhhhhhhhcccCchhHH
Q 014462 188 PQALMKADFLLLFFSLVLASGSGLTVIDNLGQICQSLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVA 265 (424)
Q Consensus 188 ~~~l~~~~fwll~~~~~~~~~~~~~~~~~l~~i~~~~g~s~~~~--~~sl~si~~~~gr~~~G~lsd~~g~k~~~~r~~~ 265 (424)
+..++++.|..++++.+....+......-++-+..+..-|+... +.....+..++..+.+|.+.||+.||+.+
T Consensus 4 ~aplr~~~Fr~lw~a~~iS~lG~~~~~va~~wlv~~lt~S~~~valv~~a~~LP~~Llsl~aG~laDr~drrril----- 78 (524)
T PF05977_consen 4 FAPLRNRNFRRLWIAQLISNLGDWMQTVALAWLVTQLTGSPLMVALVQAASTLPILLLSLFAGALADRFDRRRIL----- 78 (524)
T ss_pred cccccCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchHHH-----
Confidence 44688999999988887776665555555555555554444332 55666778888999999999999998755
Q ss_pred HHHHHHHHHHHHHHH---H---hchhHHHHHHHHHHHHHhhhhHhHHHHHHHHhhCcchhhHHHHHHHHHHHHHHHHHHH
Q 014462 266 MAVAQVVMAFALLYY---A---IGWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSG 339 (424)
Q Consensus 266 l~~~~~~~~~~~ll~---~---~~~~~~l~~~~~l~G~~~G~~~~~~~~~~se~fg~~~~g~~~g~~~~~~~lgs~l~~~ 339 (424)
..+.++.++..+.+ . ..+++.+++..++.|++.....+...+++.|+.|.++...+.++.++..+++..+ ||
T Consensus 79 -i~~~~~~~~~~~~L~~l~~~~~~~~~~Ll~~~fl~g~~~a~~~PA~~A~ip~lV~~~~L~~A~al~s~~~niar~i-GP 156 (524)
T PF05977_consen 79 -ILSQLLRALVALLLAVLAFFGLLSPWLLLILTFLLGIGSAFFNPAWQAIIPELVPKEDLPAANALNSISFNIARII-GP 156 (524)
T ss_pred -HHHHHHHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHhhHHHHHHHHHHHHHHHHhc-cc
Confidence 44444433322221 1 2356788899999999999999999999999999999999999999999999997 99
Q ss_pred HHHHHHHhhhh
Q 014462 340 VIASGIYDYYA 350 (424)
Q Consensus 340 ~l~g~l~d~~~ 350 (424)
.++|.++...|
T Consensus 157 algG~Lva~~G 167 (524)
T PF05977_consen 157 ALGGILVAFFG 167 (524)
T ss_pred hHHHHHHHHHH
Confidence 99999998877
No 155
>TIGR00901 2A0125 AmpG-related permease.
Probab=99.06 E-value=9.1e-09 Score=102.36 Aligned_cols=166 Identities=14% Similarity=0.057 Sum_probs=115.7
Q ss_pred HhcHHHHHHHcCCCchhH-HHHHHHHHhhhhhhhhhhhhhhhhhcccCchhHHHHHHHHHHHHHHHHHHh----chhHHH
Q 014462 214 IDNLGQICQSLGYADTSI-YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVMAFALLYYAI----GWPGEI 288 (424)
Q Consensus 214 ~~~l~~i~~~~g~s~~~~-~~sl~si~~~~gr~~~G~lsd~~g~k~~~~r~~~l~~~~~~~~~~~ll~~~----~~~~~l 288 (424)
..-+|.+.++.|+|.++. +.+...+...+ ++++|.++||+..|+.-.|+.++..+.++.+++.+.+++ .+.+.+
T Consensus 8 ~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~-~~~~g~~~Dr~~~~~~Grr~~~l~~~~~~~~~~~~~l~~~~~~~~l~~l 86 (356)
T TIGR00901 8 GNTLPYWLRSKNVSLKTIGFFSLVGLPYSL-KFLWSPLVDTVYLPFFGRRRSWLVLTQVLLLSLLLILSFLVPSTDLPLL 86 (356)
T ss_pred HhHHHHHHHHcCCCHHHHHHHHHHHHHHHH-HHHHHHHHhcccCCCCCccHHHHHHHHHHHHHHHHHHHcCCcchhHHHH
Confidence 345788899999998876 44433444444 899999999983221112222334555555555444432 233445
Q ss_pred HHHHHHHHHHhhhhHhHHHHHHHHhhCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhccCCCCCcc
Q 014462 289 YVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIASGIYDYYAEKQAGLLWKYNGNMLPVS 368 (424)
Q Consensus 289 ~~~~~l~G~~~G~~~~~~~~~~se~fg~~~~g~~~g~~~~~~~lgs~l~~~~l~g~l~d~~~~~~~~~~~~~~~~~~~~~ 368 (424)
+...++.+++.+...+...+++.|++++|+|+.+.++...+..+|..+ ++.+++.+++..+..+
T Consensus 87 ~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~~~G~~~-~~~l~~~l~~~~g~~~--------------- 150 (356)
T TIGR00901 87 AGLAFLIAFFSATQDIALDAWRLEILSDEELGYGSTIYIVGYRAGMLL-SGSLALVLASPEFANT--------------- 150 (356)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCHhhhchHHHHHHHHHHHHHHH-HHHHHHHHhhhccccc---------------
Confidence 566667788888888889999999999999999999999999999997 8999998887665110
Q ss_pred cCCCCCCcccCCcchHHHHHHHHHHHHHHHHHHHHHh
Q 014462 369 FRDQETPTCLGSICYSITCGIMAGLCIIAMVMSLIVV 405 (424)
Q Consensus 369 ~~~~~~~~c~g~~c~~~~f~i~a~~~~~~~~l~~~l~ 405 (424)
....+||.+|++.+++.+++.+..++..
T Consensus 151 ---------~~~~~wr~~f~i~ai~~l~~~~~~~~~~ 178 (356)
T TIGR00901 151 ---------GLITLWGYIFFWTALLILPGLLVTLFLA 178 (356)
T ss_pred ---------ccccccHHHHHHHHHHHHHHHHHHHHhc
Confidence 1234599999999987777665555443
No 156
>PRK15075 citrate-proton symporter; Provisional
Probab=99.05 E-value=8.1e-09 Score=106.07 Aligned_cols=143 Identities=14% Similarity=0.071 Sum_probs=102.8
Q ss_pred HHHHHHHHHhhhhHHHHHhcHHHHHHHcCCCchhH---HHHHH-----HHHhhhhhhhhhhhhhhhhhcccCchhHHHHH
Q 014462 197 LLLFFSLVLASGSGLTVIDNLGQICQSLGYADTSI---YVSMI-----SIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAV 268 (424)
Q Consensus 197 wll~~~~~~~~~~~~~~~~~l~~i~~~~g~s~~~~---~~sl~-----si~~~~gr~~~G~lsd~~g~k~~~~r~~~l~~ 268 (424)
-.++++.++.......+....|++.++++.++.+. ..+.. .+...+|.+..|+++||+|||+.+ ..
T Consensus 18 ~~~~~~~~~~~~d~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~Grr~~l------~~ 91 (434)
T PRK15075 18 LRVTSGNFLEMFDFFLFGFYATAIAKTFFPAGNEFASLMLTFAVFGAGFLMRPLGAIVLGAYIDRVGRRKGL------IV 91 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHhhhHHHHHHHHhhhhchHHHH------HH
Confidence 34455555555555566677888889998766432 22222 222346788999999999999755 55
Q ss_pred HHHHHHHHHHHHHhc-hhH--------HHHHHHHHHHHHhhhhHhHHHHHHHHhhCcchhhHHHHHHHHHHHHHHHHHHH
Q 014462 269 AQVVMAFALLYYAIG-WPG--------EIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSG 339 (424)
Q Consensus 269 ~~~~~~~~~ll~~~~-~~~--------~l~~~~~l~G~~~G~~~~~~~~~~se~fg~~~~g~~~g~~~~~~~lgs~l~~~ 339 (424)
+.++++++.++.... +.. .+++..++.|++.|..++....+++|++|+++||+..++......+|..+ ++
T Consensus 92 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~~rg~~~~~~~~~~~~g~~~-g~ 170 (434)
T PRK15075 92 TLSIMASGTLLIAFVPGYATIGLAAPLLVLLGRLLQGFSAGVELGGVSVYLAEIATPGRKGFYTSWQSASQQVAVVF-AA 170 (434)
T ss_pred HHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHhhccccccHHHHHHHHHhhCCcccchHHHHHHHHHHHHHHHH-HH
Confidence 556666665555432 322 35778899999999999888999999999999999999999888888775 77
Q ss_pred HHHHHHH
Q 014462 340 VIASGIY 346 (424)
Q Consensus 340 ~l~g~l~ 346 (424)
.+++.+.
T Consensus 171 ~~g~~l~ 177 (434)
T PRK15075 171 LLGYLLN 177 (434)
T ss_pred HHHHHHH
Confidence 6666553
No 157
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=99.04 E-value=1e-08 Score=104.83 Aligned_cols=156 Identities=10% Similarity=-0.041 Sum_probs=112.6
Q ss_pred CHHHhhhhHHHHHHHHHHHHhhhhHHHHHhcHHHHHHHcCC--Cchh--HHHHHHHHHhhhhhhhhhhhhhhhhhcccCc
Q 014462 186 TLPQALMKADFLLLFFSLVLASGSGLTVIDNLGQICQSLGY--ADTS--IYVSMISIWNFLGRVGGGYFSEAIVRKFAYP 261 (424)
Q Consensus 186 t~~~~l~~~~fwll~~~~~~~~~~~~~~~~~l~~i~~~~g~--s~~~--~~~sl~si~~~~gr~~~G~lsd~~g~k~~~~ 261 (424)
+.++.++++.+|...+..|+..+...+..++++.+.++.+. +... .+.+.......+||+++|++.||+++|+.+
T Consensus 224 ~~~~~~~~~~~~~~~l~~f~yvg~e~~~~s~l~~y~~~~~~~~~~~~a~~~~~~~~~~~~vGR~~~~~l~~r~~~~~~l- 302 (410)
T TIGR00885 224 SLSRLARIRHYREGVIAQFFYVGVQIMCWTFIIQYAVRLIPGMTAGFAANYNIGAMVIFFISRFIGTWLISYLAAHKVL- 302 (410)
T ss_pred hHHHHHhChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHH-
Confidence 45678899999998888888888877777889999877543 3222 256666677889999999999999876533
Q ss_pred hhHHHHHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHhhhhHhHHHHHHHHhhCcchhhHHHHHHHHHHHHHHHHHHHHH
Q 014462 262 RPVAMAVAQVVMAFALLYYAIGWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVI 341 (424)
Q Consensus 262 r~~~l~~~~~~~~~~~ll~~~~~~~~l~~~~~l~G~~~G~~~~~~~~~~se~fg~~~~g~~~g~~~~~~~lgs~l~~~~l 341 (424)
.+..++.++.+++....+........++.|++++..|+...+...+..|++......++.+. .+|+.+ .|.+
T Consensus 303 -----~i~~~~~~~~~ll~~~~~~~~~~~~l~~~glf~s~~fp~i~sl~~~~~g~~~~~~s~~l~~~--~~Gga~-~p~l 374 (410)
T TIGR00885 303 -----MAYAIIGMALCLGSIFAGGHVGLYCLTLCSAFMSLMFPTIYGIALKGLGQDTKYGAAGLVMA--IIGGGI-VPPL 374 (410)
T ss_pred -----HHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhHHHHHHH--Hhccch-HHHH
Confidence 33344444444443333333345677888999999999999999999986654434444333 389987 7999
Q ss_pred HHHHHhhhh
Q 014462 342 ASGIYDYYA 350 (424)
Q Consensus 342 ~g~l~d~~~ 350 (424)
.|.+.|..+
T Consensus 375 ~G~~~d~~~ 383 (410)
T TIGR00885 375 QGFIIDMKE 383 (410)
T ss_pred HHHHHHHhc
Confidence 999999764
No 158
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=99.02 E-value=1.4e-09 Score=117.22 Aligned_cols=128 Identities=14% Similarity=0.126 Sum_probs=106.4
Q ss_pred hcHHHHHHHcCCCchhH--HHHHHHHHhhhhhhhhhhhhhhhhhcccCchhHHHHHHHHHHHHHHHHHHhc---------
Q 014462 215 DNLGQICQSLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVMAFALLYYAIG--------- 283 (424)
Q Consensus 215 ~~l~~i~~~~g~s~~~~--~~sl~si~~~~gr~~~G~lsd~~g~k~~~~r~~~l~~~~~~~~~~~ll~~~~--------- 283 (424)
..++++.++++++..+. +++.+.+++.++.+..|++.||++||+.+ .++.++++++.++++..
T Consensus 54 ~~l~~iek~F~lss~~~G~i~s~~~i~~~~~~i~v~~~~~r~~r~~~i------~~g~ll~~lg~ll~alphf~~~~y~~ 127 (633)
T TIGR00805 54 SSLTTIERRFKLSTSSSGLINGSYEIGNLLLIIFVSYFGTKLHRPIVI------GIGCAIMGLGSFLLSLPHFLSGRYSY 127 (633)
T ss_pred hhchhhhhhhCCCCCcceeeeehhhHHHHHHHHHHHHhhcccCcceEE------EecHHHHHHHHHHHhChHHhcCCccc
Confidence 35677878899887655 88999999999999999999999998876 55566666666554321
Q ss_pred -------------------------------------------hhHHHHHHHHHHHHHhhhhHhHHHHHHHHhhCcchhh
Q 014462 284 -------------------------------------------WPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFG 320 (424)
Q Consensus 284 -------------------------------------------~~~~l~~~~~l~G~~~G~~~~~~~~~~se~fg~~~~g 320 (424)
....++++.++.|+|.+..+++..+++.|.+++++++
T Consensus 128 ~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~GiG~~~~~~~~~~~i~d~~~~~~~~ 207 (633)
T TIGR00805 128 STTVSSTGNLSSANSFLCMENLTQALRPTQCPSECQKQHKESLMWLLFLVSQLLRGIGATPIFPLGISYIDDFAKSKNSP 207 (633)
T ss_pred cccccccccccccccccccCCCCCCccccccccccccccCCCceehhhHHHHHHHhccCCcchhcCchhhhccCCccccH
Confidence 1234668999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 014462 321 ALYNFLTLASPAGSLIFSGVIASGIYDYY 349 (424)
Q Consensus 321 ~~~g~~~~~~~lgs~l~~~~l~g~l~d~~ 349 (424)
...++.+.+..+|..+ |+.++|.+.+.+
T Consensus 208 ~~~~i~~~~~~iG~~l-G~llgg~l~~~~ 235 (633)
T TIGR00805 208 LYIGILESIAVFGPAF-GYLLGSFCLQIY 235 (633)
T ss_pred HHHHHHHHHHHhhhHH-HHHHHHHHHhcc
Confidence 9999999999999997 999999887654
No 159
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.02 E-value=9.1e-09 Score=103.82 Aligned_cols=147 Identities=16% Similarity=0.147 Sum_probs=105.4
Q ss_pred HHHHHHHHHhhhhHHHHHhcHHHHHHHcCCCchhH--HHHHHHHHhhhhhhhhhhhhhhhhhcccCchhHHHHHHHHHHH
Q 014462 197 LLLFFSLVLASGSGLTVIDNLGQICQSLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVMA 274 (424)
Q Consensus 197 wll~~~~~~~~~~~~~~~~~l~~i~~~~g~s~~~~--~~sl~si~~~~gr~~~G~lsd~~g~k~~~~r~~~l~~~~~~~~ 274 (424)
|.+...+++...+...+...+|.+.+++|.+..++ .++...+...++.+++|.++||++|+... +++. .++..+..
T Consensus 7 ~~l~~~~~~~~~~~~~~~p~l~~~l~~~g~s~~~ig~~~s~~~~~~~~~~~~~g~l~d~~~~~~~~-~~~~-~~~~~l~~ 84 (382)
T TIGR00902 7 RWLALGFFGYFCAYGIFLPFFPAWLKGIGLGEEMIGLLIGAALIARFAGGLFFAPLIKDANHIIIA-LRLL-ALASAIFA 84 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHH-HHHH-HHHHHHHH
Confidence 44445555555444455667899999999998765 78888999999999999999999874321 1111 11222222
Q ss_pred HHHHHHH-hchhHHHHHHHHHHHHHhhhhHhHHHHHHHHhhCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh
Q 014462 275 FALLYYA-IGWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIASGIYDYYA 350 (424)
Q Consensus 275 ~~~ll~~-~~~~~~l~~~~~l~G~~~G~~~~~~~~~~se~fg~~~~g~~~g~~~~~~~lgs~l~~~~l~g~l~d~~~ 350 (424)
+ .+.. ..+.+.+++..++.|.+.+...+...+++.+ + .+++++++|.......+|..+ +|.+.|.+.+..+
T Consensus 85 ~--~~~~~~~~~~~l~~~~~l~~~~~~~~~p~~~al~~~-~-~~~~~~~~g~~~~~~slG~~~-g~~l~g~l~~~~g 156 (382)
T TIGR00902 85 A--AFSAGAHNAWLLFIAIGLFALFFSAGMPIGDALANT-W-QKQFGLDYGKVRLIGSAAFII-GSALFGGLIGMFD 156 (382)
T ss_pred H--HHHHhhhhHHHHHHHHHHHHHHHccchhHHHHHHHH-H-HHHcCCCccHHHHHHHHHHHH-HHHHHHHHHHHcC
Confidence 2 1222 3456677777878888887777777777655 3 577899999999999999997 9999999999877
No 160
>TIGR00898 2A0119 cation transport protein.
Probab=99.02 E-value=1.8e-09 Score=112.82 Aligned_cols=146 Identities=16% Similarity=0.132 Sum_probs=115.1
Q ss_pred cHHHHHHHcCCC---chh--HHHHHHHHHhhhhhhhhhhhhhhhhhcccCchhHHHHHHHHHHHHHHHHHH-hchhHHHH
Q 014462 216 NLGQICQSLGYA---DTS--IYVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVMAFALLYYA-IGWPGEIY 289 (424)
Q Consensus 216 ~l~~i~~~~g~s---~~~--~~~sl~si~~~~gr~~~G~lsd~~g~k~~~~r~~~l~~~~~~~~~~~ll~~-~~~~~~l~ 289 (424)
..+.+.++++.+ ... ...++..++..+|.++.|+++||+|||+.+ .++.++.+++.++.+ ..+.+.++
T Consensus 111 ~~~~i~~e~~l~c~~~~~~~~~~s~~~~g~~~g~~~~g~l~Dr~Grr~~~------~~~~~~~~i~~~~~~~~~~~~~~~ 184 (505)
T TIGR00898 111 FSSTIVTEWDLVCEDAWKVDLTQSCFFVGVLLGSFVFGYLSDRFGRKKVL------LLSTLVTAVSGVLTAFSPNYTVFL 184 (505)
T ss_pred ccccEEEEecceechHHHHHHHHHHHHHHHHHHHHhHHHhhhhccchHHH------HHHHHHHHHHHHHHHHcccHHHHH
Confidence 345666777876 433 388899999999999999999999998654 455555555555544 34567788
Q ss_pred HHHHHHHHHhhhhHhHHHHHHHHhhCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhccCCCCCccc
Q 014462 290 VTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIASGIYDYYAEKQAGLLWKYNGNMLPVSF 369 (424)
Q Consensus 290 ~~~~l~G~~~G~~~~~~~~~~se~fg~~~~g~~~g~~~~~~~lgs~l~~~~l~g~l~d~~~~~~~~~~~~~~~~~~~~~~ 369 (424)
+..++.|++.|...+...++++|++|.++|+...++...+..+|.++ ++.+++.+. .
T Consensus 185 ~~r~l~G~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~-~~~~~~~~~---~------------------- 241 (505)
T TIGR00898 185 VFRLLVGMGIGGIWVQAVVLNTEFLPKKQRAIVGTLIQVFFSLGLVL-LPLVAYFIP---D------------------- 241 (505)
T ss_pred HHHHHHHhhccchHHHHHHHhheecChhhhHHHHHHHHHHHHHHHHH-HHHHHHHhh---H-------------------
Confidence 89999999999999999999999999999999999998888888876 677655432 1
Q ss_pred CCCCCCcccCCcchHHHHHHHHHHHHHHHHHHHH
Q 014462 370 RDQETPTCLGSICYSITCGIMAGLCIIAMVMSLI 403 (424)
Q Consensus 370 ~~~~~~~c~g~~c~~~~f~i~a~~~~~~~~l~~~ 403 (424)
||+.|++.+..+++..+..++
T Consensus 242 -------------wr~~~~~~~i~~~~~~~~~~~ 262 (505)
T TIGR00898 242 -------------WRWLQLAVSLPTFLFFLLSWF 262 (505)
T ss_pred -------------HHHHHHHHHHHHHHHHHHHHh
Confidence 899999998887777666543
No 161
>PRK09848 glucuronide transporter; Provisional
Probab=99.01 E-value=1.2e-08 Score=105.21 Aligned_cols=157 Identities=11% Similarity=0.064 Sum_probs=114.7
Q ss_pred HHHhhhhHHHHHHHHHHHHhhhhHHHHHhcHHHHHHH-cCCCchhH-H-HHHHHHHhhhhhhhhhhhhhhhhhcccCchh
Q 014462 187 LPQALMKADFLLLFFSLVLASGSGLTVIDNLGQICQS-LGYADTSI-Y-VSMISIWNFLGRVGGGYFSEAIVRKFAYPRP 263 (424)
Q Consensus 187 ~~~~l~~~~fwll~~~~~~~~~~~~~~~~~l~~i~~~-~g~s~~~~-~-~sl~si~~~~gr~~~G~lsd~~g~k~~~~r~ 263 (424)
++++++++.|+.+.+..++............+++.++ +|.++... + .....+...++.++.+++.||+++|+.+
T Consensus 221 ~~~l~~n~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~l~~r~g~~~~~--- 297 (448)
T PRK09848 221 LQTLKRNRPLFMLCIGALCVLISTFAVSASSLFYVRYVLNDTGLFTVLVLVQNLVGTVASAPLVPGMVARIGKKNTF--- 297 (448)
T ss_pred HHHHhCCchHHHHHHHHHHHHHHHHHHhhhheeeEeeecCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHH---
Confidence 5568899999988887777766666655566666665 67655433 3 2333566788999999999999987654
Q ss_pred HHHHHHHHHHHHHHHHHHh---chhHHHHHHHHHHHHHhhhhHhHHHHHHHHhhCc-------chhhHHHHHHHHHHHHH
Q 014462 264 VAMAVAQVVMAFALLYYAI---GWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGL-------KSFGALYNFLTLASPAG 333 (424)
Q Consensus 264 ~~l~~~~~~~~~~~ll~~~---~~~~~l~~~~~l~G~~~G~~~~~~~~~~se~fg~-------~~~g~~~g~~~~~~~lg 333 (424)
.++.++.+++.+++.. .+.+.+++..++.|+|.+...+...+..++..+. ++.|..+++.++...+|
T Consensus 298 ---~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~l~g~G~~~~~~~~~al~~~~~~~~~~~~g~r~~G~~~~~~~~~~klg 374 (448)
T PRK09848 298 ---LIGALLGTCGYLLFFWVSVWSLPVALVALAIASIGQGVTMTVMWALEADTVEYGEYLTGVRIEGLTYSLFSFTRKCG 374 (448)
T ss_pred ---HHHHHHHHHHHHHHHHcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHhhCccchhHHHHHHHHHHHHH
Confidence 5555555555554433 2344556667788999999998888888887643 45699999999999999
Q ss_pred HHHHHHHHHHHHHhhhh
Q 014462 334 SLIFSGVIASGIYDYYA 350 (424)
Q Consensus 334 s~l~~~~l~g~l~d~~~ 350 (424)
+.+ ++.+.|.+.+..|
T Consensus 375 ~ai-g~~i~g~~l~~~G 390 (448)
T PRK09848 375 QAI-GGSIPAFILGLSG 390 (448)
T ss_pred HHH-HHHHHHHHHHHcC
Confidence 997 9999998887655
No 162
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=98.98 E-value=1.1e-08 Score=102.17 Aligned_cols=183 Identities=18% Similarity=0.227 Sum_probs=138.2
Q ss_pred CCHHHhhhhHHHHHHHHHHHHhhhhHHHHHhcHHHHHH-HcCCCchhH--HHHHHHHHhhhhhhhhhhhhhhhhhcccCc
Q 014462 185 FTLPQALMKADFLLLFFSLVLASGSGLTVIDNLGQICQ-SLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYP 261 (424)
Q Consensus 185 ~t~~~~l~~~~fwll~~~~~~~~~~~~~~~~~l~~i~~-~~g~s~~~~--~~sl~si~~~~gr~~~G~lsd~~g~k~~~~ 261 (424)
+++++..+.++.....++.++..=...+.+.....+.. ++|++..+. +....++..++|.++.|++.||++.|+.+
T Consensus 243 ~t~k~i~~~~~i~~FLiA~~~~~DGv~til~~~~~fg~~~~gls~~~lll~g~~~~vvA~lg~ii~g~Ld~rfg~k~vl- 321 (438)
T COG2270 243 STFKEIRGRKNLVLFLIARFFYIDGVNTILAMGGVFGAADLGLSSTELLLIGIALSVVAALGAIIAGFLDERFGSKPVL- 321 (438)
T ss_pred HHHHHHhcccchHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCceee-
Confidence 34666666666666666665544333344444455565 689998876 66778899999999999999999998665
Q ss_pred hhHHHHHHHHHHHHHHHH-HHhchhHHHHHHHHHHHHHhhhhHhHHHHHHHHhhCcchhhHHHHHHHHHHHHHHHHHHHH
Q 014462 262 RPVAMAVAQVVMAFALLY-YAIGWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGV 340 (424)
Q Consensus 262 r~~~l~~~~~~~~~~~ll-~~~~~~~~l~~~~~l~G~~~G~~~~~~~~~~se~fg~~~~g~~~g~~~~~~~lgs~l~~~~ 340 (424)
.+++++..+..+. +.......+++...++|++.|..++..-++..++.|+++-+..+|+.++....++.+ ||.
T Consensus 322 -----~~~lvi~~~~~~~~~~~~~~~~f~i~gll~g~s~G~~qA~SRSy~~~lvp~~k~~~fFglyaltgra~S~~-gp~ 395 (438)
T COG2270 322 -----MIGLVILSIAALYLIFLEGELDFWILGLLVGTSLGGAQASSRSYLARLVPKGKEGRFFGLYALTGRAASFL-GPF 395 (438)
T ss_pred -----hHHHHHHHHHHHHHHHccccHHHHHHHHHHHHhcchHHHHHHHHHHHhCCCccccceeehhhhhhhHHHHH-HHH
Confidence 4444444443333 333445567888899999999999999999999999999999999999999999997 999
Q ss_pred HHHHHHhhhhhhhhhhhhhccCCCCCcccCCCCCCcccCCcchHHHHHHHHHHHHHHHHHHHHHh
Q 014462 341 IASGIYDYYAEKQAGLLWKYNGNMLPVSFRDQETPTCLGSICYSITCGIMAGLCIIAMVMSLIVV 405 (424)
Q Consensus 341 l~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~g~~c~~~~f~i~a~~~~~~~~l~~~l~ 405 (424)
+.+.+.|.+++ .|..+..+..+.+++.++.+.+.
T Consensus 396 lv~v~t~iTg~-------------------------------~r~g~~~i~vll~iGl~~L~~v~ 429 (438)
T COG2270 396 LVAVITQITGS-------------------------------SRAGVLSIIVLLLIGLLLLLRVK 429 (438)
T ss_pred HHHHHHHHhcc-------------------------------hhhHHHHHHHHHHhhHhhEEeec
Confidence 99999998873 57777777777777766654443
No 163
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=98.98 E-value=3.5e-09 Score=103.76 Aligned_cols=137 Identities=16% Similarity=0.122 Sum_probs=99.6
Q ss_pred HHHHHHHhhhhhhhhhhhhhhhhhcccCchhHHHHHHHHHHHHHHHHHH-hchhHHHHHHHHHHHHHhhhhHhHHHHHHH
Q 014462 233 VSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVMAFALLYYA-IGWPGEIYVTTVLVGLSYGAHWAIVPAAAS 311 (424)
Q Consensus 233 ~sl~si~~~~gr~~~G~lsd~~g~k~~~~r~~~l~~~~~~~~~~~ll~~-~~~~~~l~~~~~l~G~~~G~~~~~~~~~~s 311 (424)
+-+.++..+-|.++.+++.||+|||+.+ +...++.++..+++. ..+.....+..+..-++..+.+.+.+.++.
T Consensus 387 llitslaefPGlLIt~~iverlGRKkTM------al~l~~f~iflfll~~c~~rn~~tvllf~arafisg~fqvaYvYtP 460 (528)
T KOG0253|consen 387 LLITSLAEFPGLLITGVIVERLGRKKTM------ALSLILFGIFLFLLTTCKTRNAYTVLLFTARAFISGAFQVAYVYTP 460 (528)
T ss_pred HHHHHHhhCCchhHHHHHHHHhcchhHH------HHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHhchheEEEEecC
Confidence 4456778899999999999999999866 555555555444433 233333333444444566666778899999
Q ss_pred HhhCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhccCCCCCcccCCCCCCcccCCcchHHHHHHHH
Q 014462 312 ELFGLKSFGALYNFLTLASPAGSLIFSGVIASGIYDYYAEKQAGLLWKYNGNMLPVSFRDQETPTCLGSICYSITCGIMA 391 (424)
Q Consensus 312 e~fg~~~~g~~~g~~~~~~~lgs~l~~~~l~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~g~~c~~~~f~i~a 391 (424)
|+||++.|+++.|..+.+..+|+++ .|.++ ..... . -..+..+.+
T Consensus 461 EVyPTavRatgvGtcSsmaRIggI~-~p~iA-~~~e~-s--------------------------------~sl~i~vy~ 505 (528)
T KOG0253|consen 461 EVYPTAVRATGVGTCSSMARIGGIF-SPVIA-MRAEL-S--------------------------------TSLPIFVYG 505 (528)
T ss_pred cccchhhhhcchhhhhhHHhhhhhh-hhHHH-HHhcc-c--------------------------------eeehHHHHH
Confidence 9999999999999999999999997 89888 22111 1 345666777
Q ss_pred HHHHHHHHHHHHHhhhhhH
Q 014462 392 GLCIIAMVMSLIVVHRTKS 410 (424)
Q Consensus 392 ~~~~~~~~l~~~l~~~~~~ 410 (424)
++++++.++++++..++|.
T Consensus 506 ~~~ilagIavcffPiEtkG 524 (528)
T KOG0253|consen 506 ALFILAGIAVCFFPIETKG 524 (528)
T ss_pred HHHHHHHHHheeeeeccCC
Confidence 8888888888888777764
No 164
>PRK11043 putative transporter; Provisional
Probab=98.97 E-value=3.5e-08 Score=99.87 Aligned_cols=159 Identities=15% Similarity=0.111 Sum_probs=110.7
Q ss_pred CHHHhhhhHHHHHHHHHHHHhhhhHHHHHhcHHHHHHHcCCCchhH--HHHHHHHHhhhhhhhhhhhhhhhhhcccCchh
Q 014462 186 TLPQALMKADFLLLFFSLVLASGSGLTVIDNLGQICQSLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRP 263 (424)
Q Consensus 186 t~~~~l~~~~fwll~~~~~~~~~~~~~~~~~l~~i~~~~g~s~~~~--~~sl~si~~~~gr~~~G~lsd~~g~k~~~~r~ 263 (424)
++++.++++++|...+...+.......+..+.|.+.++.|++.... ......++..+|+...+++.||+++|+..
T Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~g~~~~~~~~~~~~g~~~~~~l~~r~~~~~~~--- 271 (401)
T PRK11043 195 TFKQLLKSKTYLGNVLIFAACSAAFFAWLTGSPFILEQMGYSPADIGLSYVPQTIAFLVGGYGCRAALQKWGGEQLL--- 271 (401)
T ss_pred HHHHHHcChhHHHHHHHHHHHHHHHHHHHHHhHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHH---
Confidence 4677889999987766665555555666778888888889987654 45566778888999999999999887643
Q ss_pred HHHHHHHHHHHHHHHHHHh---chhHHHHHHHHHHHHHhhhhHhHHHHHHHHhhCcchhhHHHHHHHHHHHHHHHHHHHH
Q 014462 264 VAMAVAQVVMAFALLYYAI---GWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGV 340 (424)
Q Consensus 264 ~~l~~~~~~~~~~~ll~~~---~~~~~l~~~~~l~G~~~G~~~~~~~~~~se~fg~~~~g~~~g~~~~~~~lgs~l~~~~ 340 (424)
....+...+..+..+++.. .....+.+...+.|++.|..++...+...+.+| +++|.+.++.++....++.+ ++.
T Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~~~~~-~~~ 349 (401)
T PRK11043 272 PWLLVLFAVSVIAIWLASLLSHPSLVPLLIPFCVMAAANGAIYPIVVAQALRPFP-QATGKAAALQNTLQLGLCFL-ASL 349 (401)
T ss_pred HHHHHHHHHHHHHHHHHHHhccCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCc-ccChHHHHHHHHHHHHHHHH-HHH
Confidence 1112222222222222221 223344556677888888888888888778885 67899999999988777776 788
Q ss_pred HHHHHHhhh
Q 014462 341 IASGIYDYY 349 (424)
Q Consensus 341 l~g~l~d~~ 349 (424)
+.|.+.|..
T Consensus 350 ~~g~l~~~~ 358 (401)
T PRK11043 350 LVSALISTP 358 (401)
T ss_pred HHHHccCCC
Confidence 889887743
No 165
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=98.97 E-value=9.6e-09 Score=100.88 Aligned_cols=146 Identities=16% Similarity=0.227 Sum_probs=108.6
Q ss_pred HHHhhhhHHHHHHHHHHHHhhhhHHHHHhcHHHH-HHHcCCC-chhH--HHHHHHHHhhhhhhhhhhhhhhhhhcccCch
Q 014462 187 LPQALMKADFLLLFFSLVLASGSGLTVIDNLGQI-CQSLGYA-DTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPR 262 (424)
Q Consensus 187 ~~~~l~~~~fwll~~~~~~~~~~~~~~~~~l~~i-~~~~g~s-~~~~--~~sl~si~~~~gr~~~G~lsd~~g~k~~~~r 262 (424)
+++..+++.+|.+....++..........++|.+ .+.+|++ ..+. +.++..+.+.++++..|+++||+++|+..
T Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~-- 276 (352)
T PF07690_consen 199 FKSLFKNPVLWILLIAFFLFFFVFSGFSFFLPLYLQEVLGFSGPSQAGLLFSIFGIVGIIGSLLAGRLSDRFGRRRRL-- 276 (352)
T ss_dssp CTHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHH--
T ss_pred cccccccchhhhhhhhhhHHHHHHHHhhcccchhhhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHH--
Confidence 4457777777866666666555566677788887 4668888 4444 68888999999999999999999876533
Q ss_pred hHHHHHHHHHHHHHHHHHH---h-chhHHHHHHHHHHHHHhhhhHhHHHHHHHHhhCcchhhHHHHHHHHHHHHHHHHHH
Q 014462 263 PVAMAVAQVVMAFALLYYA---I-GWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFS 338 (424)
Q Consensus 263 ~~~l~~~~~~~~~~~ll~~---~-~~~~~l~~~~~l~G~~~G~~~~~~~~~~se~fg~~~~g~~~g~~~~~~~lgs~l~~ 338 (424)
.+....+.+..+.+. . .+....+...++.|++.|..++.....+.+.+|++++|+.+|+.++...+|+.+ +
T Consensus 277 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~i-g 351 (352)
T PF07690_consen 277 ----LIAILLLILGALGLLLLPFSSSPVWLIIALFLIGFGFGIVFPILFSLIQELVPPEYRGTAFGLFNSIGSLGGII-G 351 (352)
T ss_dssp ----HHHHHHHHHHHHHHCCSHHHCHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCHTCHHHHHHHHHHHHHHHHHHH-H
T ss_pred ----HHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHH-C
Confidence 222222222222222 2 234566668888999999999999999999999999999999999999999987 7
Q ss_pred H
Q 014462 339 G 339 (424)
Q Consensus 339 ~ 339 (424)
|
T Consensus 352 P 352 (352)
T PF07690_consen 352 P 352 (352)
T ss_dssp H
T ss_pred C
Confidence 6
No 166
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=98.97 E-value=1.4e-08 Score=102.39 Aligned_cols=132 Identities=14% Similarity=0.157 Sum_probs=97.7
Q ss_pred HHHhcHHHHHHHcCCCchhH--HHHHHHHHhhhhhhhhhhhhhhhhhcccCchhHHHHHHHHHHHHHHHHHH-hchhHHH
Q 014462 212 TVIDNLGQICQSLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVMAFALLYYA-IGWPGEI 288 (424)
Q Consensus 212 ~~~~~l~~i~~~~g~s~~~~--~~sl~si~~~~gr~~~G~lsd~~g~k~~~~r~~~l~~~~~~~~~~~ll~~-~~~~~~l 288 (424)
.+...+|.+.+++|.|..+. .+++..+...++.+.+|.++||++|+....|.. .+...+..+ .... ..+.+.+
T Consensus 22 ~~~p~l~~~l~~~g~s~~~iG~~~~~~~l~~~l~~~~~g~l~dr~g~~~~~~~~~--~~~~~~~~~--~~~~~~~~~~~l 97 (382)
T PRK11128 22 VFLPFWSVWLKGQGYTPETIGLLLGAGLVARFLGSLLIAPRVKDPSQLIPALRLL--ALLTLLFAV--AFWFGAHSFWLL 97 (382)
T ss_pred HHhhhHHHHHHhcCCCHHHHHHHHHHHHHHHHhhhHHHHHHHhhhcchHHHHHHH--HHHHHHHHH--HHHHhcccHHHH
Confidence 34556788999999987765 888999999999999999999999853221211 111211111 1222 3456667
Q ss_pred HHHHHHHHHHhhhhHhHHHHHHHHhhCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh
Q 014462 289 YVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIASGIYDYYA 350 (424)
Q Consensus 289 ~~~~~l~G~~~G~~~~~~~~~~se~fg~~~~g~~~g~~~~~~~lgs~l~~~~l~g~l~d~~~ 350 (424)
++..++.|++.+..++...+++.+. .++++..++.......+|..+ +|.++|.++++.+
T Consensus 98 ~i~~~l~g~~~~~~~~~~~a~~~~~--~~~~~~a~~~~~~~~~lg~~i-gp~lgg~l~~~~g 156 (382)
T PRK11128 98 FVAIGLFNLFFSPLVPLTDALANTW--QKQIGLDYGKVRLWGSIAFVI-GSALTGKLVSWFG 156 (382)
T ss_pred HHHHHHHHHHHcccccHHHHHHHHH--HhhccCCcchHHHHHHHHHHH-HHHHHHHHHHHcC
Confidence 7788888998888888777776665 466788888889999999997 9999999999887
No 167
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=98.96 E-value=6e-10 Score=112.16 Aligned_cols=170 Identities=15% Similarity=0.177 Sum_probs=131.1
Q ss_pred HHHHhhhhHHHHHhcHHHHHHHcCCCchhH--HHHHHHHHhhhhhhhhhhhhhhhhhcccCchhHHHHHHHHHHHHHHHH
Q 014462 202 SLVLASGSGLTVIDNLGQICQSLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVMAFALLY 279 (424)
Q Consensus 202 ~~~~~~~~~~~~~~~l~~i~~~~g~s~~~~--~~sl~si~~~~gr~~~G~lsd~~g~k~~~~r~~~l~~~~~~~~~~~ll 279 (424)
+.......-+++-..++.+.+.++.+++.. +.+...+...+..|+.|++.||+.||+.+ .++..+-.++.+.
T Consensus 41 vnlmny~Dr~~iagv~~~v~~~fni~~s~~Gll~~vf~v~~~i~sPl~gyLadryNR~~v~------~vG~~iW~~Av~~ 114 (493)
T KOG1330|consen 41 VNLMNYADRYTIAGVLKEVQTYFNISDSELGLLQTVFIVVFMIASPLFGYLADRYNRKRVI------AVGIFIWTLAVFA 114 (493)
T ss_pred HHHHHHhhhhhhhhhhHHHHHhcCCCchhccchhHHHHHHHHHHHHHHHHHHhhcCcceEE------eeHHHHHHHHHHH
Confidence 333333344444445666666778877654 78888899999999999999999999876 5666655555554
Q ss_pred HHh-chhHHHHHHHHHHHHHhhhhHhHHHHHHHHhhCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhh
Q 014462 280 YAI-GWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIASGIYDYYAEKQAGLLW 358 (424)
Q Consensus 280 ~~~-~~~~~l~~~~~l~G~~~G~~~~~~~~~~se~fg~~~~g~~~g~~~~~~~lgs~l~~~~l~g~l~d~~~~~~~~~~~ 358 (424)
..+ ...+.+.+...+.|+|.....++.++++++.|+..+|++.+++.+++.++|+.+ |-+..+.+.+.++
T Consensus 115 ~~fs~~Fwq~~l~R~~vGiGeAs~~~ia~s~IaD~f~~~~Rs~~~~ify~~ipvGsgl-G~vvgs~va~~~~-------- 185 (493)
T KOG1330|consen 115 SGFSNHFWQVLLCRGFVGIGEASYSPIAPSLIADSFPDDKRSRVLGIFYFAIPVGSGL-GYVVGSVVASLTF-------- 185 (493)
T ss_pred HHHHHHHHHHHHHHHHhccchhhhcccchhHhhhcCcchhhhHHHHHhhhhcccccce-eEEeeeeeccCcc--------
Confidence 443 345778889999999999999999999999999999999999999999999986 6554446555544
Q ss_pred hccCCCCCcccCCCCCCcccCCcchHHHHHHHHHHHHHHHHHHHHHhhhhh
Q 014462 359 KYNGNMLPVSFRDQETPTCLGSICYSITCGIMAGLCIIAMVMSLIVVHRTK 409 (424)
Q Consensus 359 ~~~~~~~~~~~~~~~~~~c~g~~c~~~~f~i~a~~~~~~~~l~~~l~~~~~ 409 (424)
-||+.|++.+++.++..++..++..+.+
T Consensus 186 -----------------------~Wr~af~~~avl~vi~~~L~~~f~~eP~ 213 (493)
T KOG1330|consen 186 -----------------------WWRWAFRGSAVLGVIVGLLVFLFVREPE 213 (493)
T ss_pred -----------------------ceEEEEEeehHHHHHHHHHHHhhccCcc
Confidence 1999999999999998888777665444
No 168
>TIGR00901 2A0125 AmpG-related permease.
Probab=98.95 E-value=6.2e-08 Score=96.34 Aligned_cols=136 Identities=17% Similarity=0.137 Sum_probs=97.3
Q ss_pred hhhhHH---HHHHHHHHHHhhhhHHHHHhcHHHHHHHcCCCchhH--HHHHHH-HHhhhhhhhhhhhhhhhhhcccCchh
Q 014462 190 ALMKAD---FLLLFFSLVLASGSGLTVIDNLGQICQSLGYADTSI--YVSMIS-IWNFLGRVGGGYFSEAIVRKFAYPRP 263 (424)
Q Consensus 190 ~l~~~~---fwll~~~~~~~~~~~~~~~~~l~~i~~~~g~s~~~~--~~sl~s-i~~~~gr~~~G~lsd~~g~k~~~~r~ 263 (424)
.++++. +|.+.+..++..........++|.+.+++|++..+. +.+..+ +...+|.+++|++.||+++|+..
T Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~g~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l--- 278 (356)
T TIGR00901 202 FFQRKNMIQALLLLLLIVLYKLGDSAATVLTTLFLLDMGFSKEEIALVAKINGLLGAILGGLIGGIIMQPLNILYAL--- 278 (356)
T ss_pred HHHhcCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHhHHHHHHHHHHHHHHHHHHHhhhhHHHHH---
Confidence 455543 676666666665666667778899988899987764 344444 67789999999999999987654
Q ss_pred HHHHHHHHHHHHHHHHHHh------------chhHHHHHHHHHHHHHhhhhHhHHHHHHHHhhCcchhhHHHHHHHHHHH
Q 014462 264 VAMAVAQVVMAFALLYYAI------------GWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASP 331 (424)
Q Consensus 264 ~~l~~~~~~~~~~~ll~~~------------~~~~~l~~~~~l~G~~~G~~~~~~~~~~se~fg~~~~g~~~g~~~~~~~ 331 (424)
..+.++.+++..++.. .+.+.+....++.+++.|..++...++.+|.+|++++|+.+++.+....
T Consensus 279 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~ 355 (356)
T TIGR00901 279 ---LLFGIVQALTNAGFVWLASNGHHDGITFPHLLMLFLTITLEAVTGGLGTVAFVAFLSKLSNPKFGATQMALLSSLSA 355 (356)
T ss_pred ---HHHHHHHHHHHHHHHHHHhcCcccccccchHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHh
Confidence 3333333333332221 2234456667777999999999999999999999999999999877654
No 169
>PF13347 MFS_2: MFS/sugar transport protein
Probab=98.95 E-value=1.5e-07 Score=96.44 Aligned_cols=159 Identities=18% Similarity=0.252 Sum_probs=124.9
Q ss_pred CCHHHhhhhHHHHHHHHHHHHhhhhHHHHHhcHHHHHHH-cCCCch-hHHHHHHHHHhhhhhhhhhhhhhhhhhcccCch
Q 014462 185 FTLPQALMKADFLLLFFSLVLASGSGLTVIDNLGQICQS-LGYADT-SIYVSMISIWNFLGRVGGGYFSEAIVRKFAYPR 262 (424)
Q Consensus 185 ~t~~~~l~~~~fwll~~~~~~~~~~~~~~~~~l~~i~~~-~g~s~~-~~~~sl~si~~~~gr~~~G~lsd~~g~k~~~~r 262 (424)
..+++.++++.++.++...++............+.+.++ .|.+.. +.+..+..+.+.++.+++++++||+|+|+.+
T Consensus 216 ~~~~~~~~nr~~~~l~~~~~~~~~~~~~~~~~~~y~~~~vl~~~~~~~~~~~~~~~~~~v~~~~~~~l~~r~gk~~~~-- 293 (428)
T PF13347_consen 216 DSLRSLFRNRPFRILLLAFFLQWLAFALMNTFLPYYFTYVLGNEGLISIFMLIFFVASIVGSPLWGRLSKRFGKKKVY-- 293 (428)
T ss_pred cchhhhcccchHHHHHHHHHHHHhhhhhhhhHHHHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHHccceeeh--
Confidence 346678899999988888887766555555556666666 566543 3377788899999999999999999999876
Q ss_pred hHHHHHHHHHHHHHHHHHH-h--chhHHHHHHHHHHHHHhhhhHhHHHHHHHHhhC-------cchhhHHHHHHHHHHHH
Q 014462 263 PVAMAVAQVVMAFALLYYA-I--GWPGEIYVTTVLVGLSYGAHWAIVPAAASELFG-------LKSFGALYNFLTLASPA 332 (424)
Q Consensus 263 ~~~l~~~~~~~~~~~ll~~-~--~~~~~l~~~~~l~G~~~G~~~~~~~~~~se~fg-------~~~~g~~~g~~~~~~~l 332 (424)
..+.++.+++.+++. . .+.+.+++..++.|++.|..+...+++.+|..+ .++-|..+++.+....+
T Consensus 294 ----~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~gi~~~~~~~~~~a~~ad~id~~e~~tg~r~~g~~~s~~~~~~k~ 369 (428)
T PF13347_consen 294 ----IIGLLLAALGFLLLFFLGPGSPWLVLILFILAGIGYGAFFVIPWAMLADVIDYDEWKTGRRREGMYFSVNSFFIKI 369 (428)
T ss_pred ----hhhHHHHHHHHHHHHHHHhhhHHHHHHHHHHhHhhhcccccccccccccchhhHHHhcCCCchHHHHHhhhhhhHH
Confidence 555566655555543 2 467788899999999999999999999998875 45679999999999999
Q ss_pred HHHHHHHHHHHHHHhhhh
Q 014462 333 GSLIFSGVIASGIYDYYA 350 (424)
Q Consensus 333 gs~l~~~~l~g~l~d~~~ 350 (424)
|..+ ++.+.|.+.+..|
T Consensus 370 ~~~l-a~~i~g~~l~~~G 386 (428)
T PF13347_consen 370 GQGL-AGAIVGLLLALVG 386 (428)
T ss_pred HHHH-HHHHHHHHHHHhC
Confidence 9998 8999998887765
No 170
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=98.94 E-value=3.3e-09 Score=104.93 Aligned_cols=141 Identities=16% Similarity=0.171 Sum_probs=126.0
Q ss_pred HHHHHHHHHhhhhhhhhhhhhhhhhhcccCchhHHHHHHHHHHHHHHHHHHhc-hhHHHHHHHHHHHHHhhhhHhHHHHH
Q 014462 231 IYVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVMAFALLYYAIG-WPGEIYVTTVLVGLSYGAHWAIVPAA 309 (424)
Q Consensus 231 ~~~sl~si~~~~gr~~~G~lsd~~g~k~~~~r~~~l~~~~~~~~~~~ll~~~~-~~~~l~~~~~l~G~~~G~~~~~~~~~ 309 (424)
++....++.+.+..+..|.+.||+|+|-.+ .++..+|..+-+++++. +.+.+.++..+.|+|..+.++.-.++
T Consensus 110 ~LFaskA~~qllvnp~~G~l~~~iGy~ipm------~~Gl~vmf~sTilFafg~sy~~l~vAR~LQgvgsA~~~tsglam 183 (464)
T KOG3764|consen 110 LLFASKALVQLLVNPFFGNLIDRIGYKIPM------VAGLFVMFLSTILFAFGNSYPMLFVARSLQGVGSAFADTSGLAM 183 (464)
T ss_pred HHHHHHHHHHHHhcccchhhHHHhccccHH------HHHHHHHHHHHHHHHHcchhHHHHHHHHHhhhhHHHHHhhhHHH
Confidence 388888999999999999999999998544 78889998888888865 46688999999999999999999999
Q ss_pred HHHhhCcch-hhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhccCCCCCcccCCCCCCcccCCcchHHHHH
Q 014462 310 ASELFGLKS-FGALYNFLTLASPAGSLIFSGVIASGIYDYYAEKQAGLLWKYNGNMLPVSFRDQETPTCLGSICYSITCG 388 (424)
Q Consensus 310 ~se~fg~~~-~g~~~g~~~~~~~lgs~l~~~~l~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~g~~c~~~~f~ 388 (424)
+++.||.++ ||.+.|+...+.++|-.+ ||+.+|.+||..| ++..|+
T Consensus 184 lAd~f~~d~er~~vmGialgfislG~lv-gPpfGGilYe~~G--------------------------------k~aPFl 230 (464)
T KOG3764|consen 184 LADVFPEDNERGSVMGIALGFISLGVLV-GPPFGGILYEFAG--------------------------------KSAPFL 230 (464)
T ss_pred HHHHcccchhhhHHHHHHHHHHhcccee-cCCcccchHhhcC--------------------------------CcCcHH
Confidence 999998776 699999999999999998 9999999999887 889999
Q ss_pred HHHHHHHHHHHHHHHHhhhhhH
Q 014462 389 IMAGLCIIAMVMSLIVVHRTKS 410 (424)
Q Consensus 389 i~a~~~~~~~~l~~~l~~~~~~ 410 (424)
++++++++...+-+++...++.
T Consensus 231 VL~~v~Lld~~L~l~vi~p~~~ 252 (464)
T KOG3764|consen 231 VLAIVLLLDGALQLLVIEPTEM 252 (464)
T ss_pred HHHHHHHHHHHHHHheeCcccc
Confidence 9999999998888887766544
No 171
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=98.90 E-value=4.7e-07 Score=91.33 Aligned_cols=148 Identities=11% Similarity=0.067 Sum_probs=86.6
Q ss_pred hhhhHHHHHHHHHHHHhhhhHHHHHhcHHHHHH-HcCCCchhH--HHHHHHHHhhhhhhhhhhhhhhhhhcccCchhHHH
Q 014462 190 ALMKADFLLLFFSLVLASGSGLTVIDNLGQICQ-SLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAM 266 (424)
Q Consensus 190 ~l~~~~fwll~~~~~~~~~~~~~~~~~l~~i~~-~~g~s~~~~--~~sl~si~~~~gr~~~G~lsd~~g~k~~~~r~~~l 266 (424)
.++++++|......++.......+....|.+.+ ++|++.... ..+..++.+.++++..|++.||+++|+..
T Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~l~~r~g~~~~~------ 272 (392)
T PRK10473 199 SLLNRFFLSRLVITTLSVTVILTFVNTSPVLLMEQMGFSRGEYAIIMALTAGVSMTVSFSTPFALGIFKPRTLM------ 272 (392)
T ss_pred HHhCHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHH------
Confidence 567777776655555554444455555666664 478887644 67788899999999999999999987644
Q ss_pred HHHHHHHHHHHHHHHh-chhHHHHHHHHHHHHHhhhhHhHHHHHHHHhhCcchh-hHHHHHHHHHHHHHHHHHHHHHHHH
Q 014462 267 AVAQVVMAFALLYYAI-GWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSF-GALYNFLTLASPAGSLIFSGVIASG 344 (424)
Q Consensus 267 ~~~~~~~~~~~ll~~~-~~~~~l~~~~~l~G~~~G~~~~~~~~~~se~fg~~~~-g~~~g~~~~~~~lgs~l~~~~l~g~ 344 (424)
.++..+..++.+++.. ......+....+.+++.+..++. ....++.|.+++ |.+.++. .++..+ ++.+++.
T Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~--~~~~~~~~~~~~~g~~~~~~----~~~~~~-g~~~~~~ 345 (392)
T PRK10473 273 LTSQVLFLAAGITLALSPSHAVSLFGITLICAGFSVGFGV--AMSQALGPFSLRAGVASSTL----GIAQVC-GSSLWIW 345 (392)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHH--HHHHHhccCcccccHHHHHH----HHHHHH-HHHHHHH
Confidence 4444444444444332 22233344444545554444333 233445554333 4444444 444444 5666666
Q ss_pred HHhhhh
Q 014462 345 IYDYYA 350 (424)
Q Consensus 345 l~d~~~ 350 (424)
+.++.+
T Consensus 346 l~~~~g 351 (392)
T PRK10473 346 LAAVLG 351 (392)
T ss_pred HHHHhc
Confidence 666655
No 172
>PRK09669 putative symporter YagG; Provisional
Probab=98.90 E-value=7.7e-08 Score=99.11 Aligned_cols=156 Identities=14% Similarity=0.109 Sum_probs=105.7
Q ss_pred HHHhhhhHHHHHHHHHHHHhhhhHHHHHhcHHHHH-HH-cCCCchhH-HHHHHHHHhhhhhhhhhhhhhhhhhcccCchh
Q 014462 187 LPQALMKADFLLLFFSLVLASGSGLTVIDNLGQIC-QS-LGYADTSI-YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRP 263 (424)
Q Consensus 187 ~~~~l~~~~fwll~~~~~~~~~~~~~~~~~l~~i~-~~-~g~s~~~~-~~sl~si~~~~gr~~~G~lsd~~g~k~~~~r~ 263 (424)
+++.++++.+|.+....++...... ....+..++ +. .+.++... +.....+...++.+++++++||+|+|+.+
T Consensus 222 ~~~~~~n~~~~~l~~~~~~~~~~~~-~~~~~~~y~~~~~~~~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~gk~~~~--- 297 (444)
T PRK09669 222 LKLLLGNSQWRIMFIFNVVLLTAVV-TRGGATLYYVNYVLLRPDLATLFLVTGMIAGLFGALLSERLLGKFDRVRAF--- 297 (444)
T ss_pred HHHHhCCchHHHHHHHHHHHHHHHH-HHhhhhheeeeeecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHH---
Confidence 5567889999988776665433332 222233333 32 22222222 44455677788999999999999987654
Q ss_pred HHHHHHHHHHHH-HHHHHH--hchhHHHHHHHHHHHHHhhhhHhHHHHHHHHhh-------CcchhhHHHHHHHHHHHHH
Q 014462 264 VAMAVAQVVMAF-ALLYYA--IGWPGEIYVTTVLVGLSYGAHWAIVPAAASELF-------GLKSFGALYNFLTLASPAG 333 (424)
Q Consensus 264 ~~l~~~~~~~~~-~~ll~~--~~~~~~l~~~~~l~G~~~G~~~~~~~~~~se~f-------g~~~~g~~~g~~~~~~~lg 333 (424)
.++.++.++ +..++. ..+.+.+++..++.|++.+...+..+++++|.. |.+.-|..+++.+....+|
T Consensus 298 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~am~ad~~d~~e~~~G~r~~g~~~s~~~~~~klg 374 (444)
T PRK09669 298 ---KWTIVAFVILSALIFFIPPSNVWLIFALNILFNFIQNLTTPLQWSMFSDVVDYEEKRSGRRLDGLVFSTNLFAIKLG 374 (444)
T ss_pred ---HHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhcCcCcchHHHHHHHHHHHHH
Confidence 223332222 221222 234455677778899999999999999999887 5566788999999999999
Q ss_pred HHHHHHHHHHHHHhhhh
Q 014462 334 SLIFSGVIASGIYDYYA 350 (424)
Q Consensus 334 s~l~~~~l~g~l~d~~~ 350 (424)
..+ |+.+.|.++|..|
T Consensus 375 ~al-g~~i~g~ll~~~G 390 (444)
T PRK09669 375 LAI-GGAVVGWILAWVD 390 (444)
T ss_pred HHH-HHHHHHHHHHHcC
Confidence 997 9999999998876
No 173
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=98.89 E-value=4.4e-07 Score=90.71 Aligned_cols=146 Identities=9% Similarity=0.035 Sum_probs=90.1
Q ss_pred HHhhhhHHHHHHHHHHHHhhhhHHHHHhcHHHHHHH-cCCCchhH--HHHHHHHHhhhhhhhhhhhhhhhhhcccCchhH
Q 014462 188 PQALMKADFLLLFFSLVLASGSGLTVIDNLGQICQS-LGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPV 264 (424)
Q Consensus 188 ~~~l~~~~fwll~~~~~~~~~~~~~~~~~l~~i~~~-~g~s~~~~--~~sl~si~~~~gr~~~G~lsd~~g~k~~~~r~~ 264 (424)
++.++++++|...+..++.......+..+.|.+..+ .|++..+. +.+...+...++++..|++.||+++|+..
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~---- 263 (377)
T PRK11102 188 ASLFRHKRVLGYMLASGFSFAGMFSFLTAGPFVYIELNGVSPQNFGYYFALNIVFLFVMTIINSRFVRRVGALNML---- 263 (377)
T ss_pred HHHHcChHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHH----
Confidence 346777777776666655555555566667776654 78887654 77888899999999999999999988644
Q ss_pred HHHHHHHH---HHHHHHHHH-hc-hhHHHHHHHHHHHHHhhhhHhHHHHHHHHhhCcchhhHHHHHHHHHH-HHHHHHHH
Q 014462 265 AMAVAQVV---MAFALLYYA-IG-WPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLAS-PAGSLIFS 338 (424)
Q Consensus 265 ~l~~~~~~---~~~~~ll~~-~~-~~~~l~~~~~l~G~~~G~~~~~~~~~~se~fg~~~~g~~~g~~~~~~-~lgs~l~~ 338 (424)
..+..+ +.+..+... .. ..+.+.+...+.+.+.+...+.....+.|..| +++|...++.+... .+|+.+ +
T Consensus 264 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~g~~~-g 339 (377)
T PRK11102 264 --RFGLWIQFIMGIWLVVSALLDLGFWALVVGVAAFVGCVSMISSNAMAVILDEFP-HMAGTASSLAGTLRFGIGAIV-G 339 (377)
T ss_pred --HHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHhhHHHHHHHhcccc-ccchHHHHHHHHHHHHHHHHH-H
Confidence 222222 222222111 11 22333334444444455555555667778776 78899988876643 344443 5
Q ss_pred HHH
Q 014462 339 GVI 341 (424)
Q Consensus 339 ~~l 341 (424)
+.+
T Consensus 340 ~~~ 342 (377)
T PRK11102 340 ALL 342 (377)
T ss_pred HHH
Confidence 544
No 174
>PRK10429 melibiose:sodium symporter; Provisional
Probab=98.88 E-value=6.2e-08 Score=100.83 Aligned_cols=155 Identities=10% Similarity=0.056 Sum_probs=105.4
Q ss_pred HhhhhHHHHHHHHHHHHhhhhHHHHHhcHHHHHHHcCCCchh--HHHHHHHHHhhhhhhhhhhhhhhhhhcccCchhHHH
Q 014462 189 QALMKADFLLLFFSLVLASGSGLTVIDNLGQICQSLGYADTS--IYVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAM 266 (424)
Q Consensus 189 ~~l~~~~fwll~~~~~~~~~~~~~~~~~l~~i~~~~g~s~~~--~~~sl~si~~~~gr~~~G~lsd~~g~k~~~~r~~~l 266 (424)
..++++.++.+....++............+.+.+....+... .+.+..++...++.+++++++||+|+|+.+
T Consensus 226 ~~~~n~~~~~ll~~~~~~~~~~~~~~~~~~y~~~y~~~~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~gkk~~~------ 299 (473)
T PRK10429 226 LIYKNDQLSCLLGMALAYNIASNIINGFAIYYFTYVIGDADLFPYYLSYAGAANLVTLILFPRLVKSLSRRILW------ 299 (473)
T ss_pred HHhcCHHHHHHHHHHHHHHHHHHHHhhheeeEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHH------
Confidence 356788888777766666544333333333333433223222 255566688889999999999999988654
Q ss_pred HHHHHHHHHHHHHHH------hchhHHHHHHHHHHHHHhhhhHhHHHHHHHHh-------hCcchhhHHHHHHHHHHHHH
Q 014462 267 AVAQVVMAFALLYYA------IGWPGEIYVTTVLVGLSYGAHWAIVPAAASEL-------FGLKSFGALYNFLTLASPAG 333 (424)
Q Consensus 267 ~~~~~~~~~~~ll~~------~~~~~~l~~~~~l~G~~~G~~~~~~~~~~se~-------fg~~~~g~~~g~~~~~~~lg 333 (424)
.++.++.+++.+.+. ..+.+.+++..++.|++.+..++..+++++|. .|.+.-|..+++.....-+|
T Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~g~~~~~~~~~~~am~ad~id~~e~~tG~R~~G~~~s~~~~~~K~~ 379 (473)
T PRK10429 300 AGASIFPVLSCGVLLLMGLAAPHNALLIVIAGILLNIGTALFWVLQVIMVADTVDYGEYKLGIRCESIAYSVQTMVVKGG 379 (473)
T ss_pred HHHHHHHHHHHHHHHHHhccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhHhcCccchhHHHHHHHHHHHHH
Confidence 333333332222211 12234556677888999999999999999988 45667788999999999999
Q ss_pred HHHHHHHHHHHHHhhhh
Q 014462 334 SLIFSGVIASGIYDYYA 350 (424)
Q Consensus 334 s~l~~~~l~g~l~d~~~ 350 (424)
+.+ ++.+.|.+.|..|
T Consensus 380 ~al-~~~i~g~~l~~~G 395 (473)
T PRK10429 380 SAF-AAFFIGVVLGLIG 395 (473)
T ss_pred HHH-HHHHHHHHHHHcC
Confidence 997 9999999988765
No 175
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=98.87 E-value=1.2e-07 Score=98.47 Aligned_cols=171 Identities=14% Similarity=0.100 Sum_probs=116.2
Q ss_pred HHhcHHHHHHHcCCCchhH--HHHHHHHHhhhhhhhhhhhhhh----hhhcccCchhHHHHHHHHHHHHHHHHHHhc-hh
Q 014462 213 VIDNLGQICQSLGYADTSI--YVSMISIWNFLGRVGGGYFSEA----IVRKFAYPRPVAMAVAQVVMAFALLYYAIG-WP 285 (424)
Q Consensus 213 ~~~~l~~i~~~~g~s~~~~--~~sl~si~~~~gr~~~G~lsd~----~g~k~~~~r~~~l~~~~~~~~~~~ll~~~~-~~ 285 (424)
...+++++.+++|.+.... +.....+...+..++.|+++|| +||||.+ +..+.+.++++.+++... +.
T Consensus 23 ~~~~l~~yl~~lg~~~~~~~~i~~~~~l~~~i~~Pi~G~lSDr~~sr~GRRrp~-----il~g~~~~~~~l~ll~~~~~~ 97 (477)
T TIGR01301 23 QLSLLTPYVQELGIPHAWASIIWLCGPLSGLLVQPLVGYLSDRCTSRFGRRRPF-----IAAGAALVAFAVILIGFAADI 97 (477)
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhHeeehhcCCCCCCCChHHH-----HHHHHHHHHHHHHHHHhCchh
Confidence 4456778889999987654 7778889999999999999995 8887654 233344444454444321 11
Q ss_pred -----------------HHHHHHHHHHHHHhhhhHhHHHHHHHHhhCcchh--hHHHHHHHHHHHHHHHHHHHHHHHHH-
Q 014462 286 -----------------GEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSF--GALYNFLTLASPAGSLIFSGVIASGI- 345 (424)
Q Consensus 286 -----------------~~l~~~~~l~G~~~G~~~~~~~~~~se~fg~~~~--g~~~g~~~~~~~lgs~l~~~~l~g~l- 345 (424)
....++..+..++.....++..++++|.+|.+++ +.++++.+....+|+.+ ++.+.|..
T Consensus 98 ~~~~~~~~~~~~~~~~i~~~~i~~~lld~~~n~~~~p~rALiaDl~p~~~~~~~~a~~~~~~~~~lG~il-g~~~g~~~~ 176 (477)
T TIGR01301 98 GHLFGDNLDKKTKPRAIIVFVVGFWILDVANNMLQGPCRAFLADLTGGDARRTRIANAYFSFFMAIGNVL-GYAAGAYSG 176 (477)
T ss_pred hhhccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCchhHHHHHHHHHHHHHHHHHHHH-HHHHHHHHh
Confidence 1223334455668888888999999999998864 68999999999999997 77777653
Q ss_pred -HhhhhhhhhhhhhhccCCCCCcccCCCCCCcccCCcchHHHHHHHHHHHHHHHHHHHHHhhhh
Q 014462 346 -YDYYAEKQAGLLWKYNGNMLPVSFRDQETPTCLGSICYSITCGIMAGLCIIAMVMSLIVVHRT 408 (424)
Q Consensus 346 -~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~g~~c~~~~f~i~a~~~~~~~~l~~~l~~~~ 408 (424)
++..+-. . .+..+.-...++.+|++.+++.+++.++.++..+++
T Consensus 177 ~~~~~~~~------------------~-~~~~~~~~~~~~~~F~i~a~~l~i~~l~t~~~v~E~ 221 (477)
T TIGR01301 177 LYKIFPFT------------------K-TEACGVSCANLKSCFLIDIILLAILTYIALSAVKEN 221 (477)
T ss_pred HHHhcccc------------------c-ccccccccchHHHHHHHHHHHHHHHHHHHeeeeecc
Confidence 3222200 0 000111122489999999988888888777766554
No 176
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=98.87 E-value=1.5e-08 Score=106.22 Aligned_cols=170 Identities=14% Similarity=0.145 Sum_probs=134.5
Q ss_pred HHHHHHHHHhhhhHHHHHhcH----HHHHHHcCCCch--hHHHHHHHHHhhhhhhhhhhhhhhhhhcccCchhHHHHHHH
Q 014462 197 LLLFFSLVLASGSGLTVIDNL----GQICQSLGYADT--SIYVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQ 270 (424)
Q Consensus 197 wll~~~~~~~~~~~~~~~~~l----~~i~~~~g~s~~--~~~~sl~si~~~~gr~~~G~lsd~~g~k~~~~r~~~l~~~~ 270 (424)
|.+.++.|...+...++.+-. +.+.++++.+.. +++.++......+..++.+.+.||+|.|... .++.
T Consensus 45 WvV~~a~fl~~~~~~g~~~~~Gv~~~~~~~~f~~s~~~~~~i~sl~~~~~~~~gpl~s~l~~rfg~R~v~------i~G~ 118 (509)
T KOG2504|consen 45 WVVVFASFLVNLSTDGLINSFGLLFEELMDYFGSSSSQIAWIGSLLLGVYLLAGPLVSALCNRFGCRTVM------IAGG 118 (509)
T ss_pred eeeeHhHHHHHHhhhcchheehhhHHHHHHHhCCCccHHHHHHHHHHHHHHHhccHHHHHHhhcCchHHH------HHHH
Confidence 666666666666555555443 445566776655 4488888888889999999999999988655 6777
Q ss_pred HHHHHHHHHHHh-chhHHH-HHHHHHHHHHhhhhHhHHHHHHHHhhCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 014462 271 VVMAFALLYYAI-GWPGEI-YVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIASGIYDY 348 (424)
Q Consensus 271 ~~~~~~~ll~~~-~~~~~l-~~~~~l~G~~~G~~~~~~~~~~se~fg~~~~g~~~g~~~~~~~lgs~l~~~~l~g~l~d~ 348 (424)
++.++++++-++ .+.+.+ ....++.|+|.|..+.+...++..+| .|+|+.+.|+...+.++|.++| |.+..++.++
T Consensus 119 ~v~~~g~~lssF~~~i~~l~lt~gvi~G~G~~~~~~paiviv~~YF-~kkR~lA~Gia~~GsG~G~~~~-~~l~~~l~~~ 196 (509)
T KOG2504|consen 119 LVAALGLLLSSFATSLWQLYLTFGVIGGLGLGLIYLPAVVILGTYF-EKKRALATGIAVSGTGVGTVVF-PPLLKYLLSK 196 (509)
T ss_pred HHHHHHHHHHHHHhhHHHHHHHHHHHhhccchhhhcchhhhhhhHh-HHHHHHHHhhhhccCCcceeeH-HHHHHHHHHH
Confidence 888888777554 345544 45688889999999999999999999 7889999999999999999997 7888999999
Q ss_pred hhhhhhhhhhhccCCCCCcccCCCCCCcccCCcchHHHHHHHHHHHHHHHHHHHHHhh
Q 014462 349 YAEKQAGLLWKYNGNMLPVSFRDQETPTCLGSICYSITCGIMAGLCIIAMVMSLIVVH 406 (424)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~g~~c~~~~f~i~a~~~~~~~~l~~~l~~ 406 (424)
.| ||.++++.+++++-.++....++.
T Consensus 197 ~G--------------------------------~r~~~l~~~~~~l~~~~~~~~~rp 222 (509)
T KOG2504|consen 197 YG--------------------------------WRGALLIFGGISLNVLVAGALLRP 222 (509)
T ss_pred hC--------------------------------cHHHHHHHHHHHHHHHHHHHHcCC
Confidence 88 999999999998776666665543
No 177
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=98.85 E-value=2e-07 Score=94.65 Aligned_cols=153 Identities=12% Similarity=-0.033 Sum_probs=100.0
Q ss_pred HhhhhHHHHHHHHHHHHhhhhHHHHHhcHHHHHHH-cCCCchhH--HHHHHHHHhhhhhhhhhhhhhhhhhcccCchhHH
Q 014462 189 QALMKADFLLLFFSLVLASGSGLTVIDNLGQICQS-LGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVA 265 (424)
Q Consensus 189 ~~l~~~~fwll~~~~~~~~~~~~~~~~~l~~i~~~-~g~s~~~~--~~sl~si~~~~gr~~~G~lsd~~g~k~~~~r~~~ 265 (424)
..++++.++......++...........++.+.++ +|+++.+. +.+..+++..+|.+..+++.||.++++.+
T Consensus 200 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~s~~~~G~~~~~~~~g~i~g~~~~~~l~~~~~~~~~~----- 274 (393)
T PRK11195 200 VLWRDKLGRFSLAGTTLFWGAGATLRFLVLAWAPVALGITLNQPAYLQAVVAIGIAVGAGAAARLVTLETVLRVL----- 274 (393)
T ss_pred HHHhCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchH-----
Confidence 35666665544443333333333444455566654 78887654 77888889999999999998887765433
Q ss_pred HHHHHHHHHHHHHHHHh-chhHHHHHHHHHHHHHhhhhHhHHHHHHHHhhCcch-hhHHHHHHHHHHHHHHHHHHHHHHH
Q 014462 266 MAVAQVVMAFALLYYAI-GWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKS-FGALYNFLTLASPAGSLIFSGVIAS 343 (424)
Q Consensus 266 l~~~~~~~~~~~ll~~~-~~~~~l~~~~~l~G~~~G~~~~~~~~~~se~fg~~~-~g~~~g~~~~~~~lgs~l~~~~l~g 343 (424)
..+. ++++..+.+.. .+.+...+..++.|++.|...++..+.+.+.-+.+. +|...++.++...+|..+ +..+.+
T Consensus 275 -~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~G~~~g~~~~~~~~~~q~~~~~~~~~g~~~a~~~~~~~~~~~~-~~~~~~ 351 (393)
T PRK11195 275 -PAGI-LMGLVVLLMALQHSLLPAYPLLILIGALGGFFVVPMNALLQHRGHVLVGAGHSIAVQNFNENLAMLL-MLGLYS 351 (393)
T ss_pred -HHHH-HHHHHHHHHHHHhHHHHHHHHHHHHHHhhhhhhhhHHHHHHhhCcccccchhHHHHHhHHHHHHHHH-HHHHHH
Confidence 2332 22333323332 233445566778899988888888888887654433 699999999999999997 788887
Q ss_pred HHHhhhh
Q 014462 344 GIYDYYA 350 (424)
Q Consensus 344 ~l~d~~~ 350 (424)
.+ +..+
T Consensus 352 ~~-~~~~ 357 (393)
T PRK11195 352 LL-VKLG 357 (393)
T ss_pred HH-HHcC
Confidence 54 5555
No 178
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=98.84 E-value=2.3e-07 Score=93.68 Aligned_cols=169 Identities=14% Similarity=0.054 Sum_probs=111.4
Q ss_pred HHHHHHHhhhhHHHHHhcHHHHHHHcCCCchhH-H---HHHHHHHhhhhhhhh-hhhhhhhhhcccCchhHHHHHHHHHH
Q 014462 199 LFFSLVLASGSGLTVIDNLGQICQSLGYADTSI-Y---VSMISIWNFLGRVGG-GYFSEAIVRKFAYPRPVAMAVAQVVM 273 (424)
Q Consensus 199 l~~~~~~~~~~~~~~~~~l~~i~~~~g~s~~~~-~---~sl~si~~~~gr~~~-G~lsd~~g~k~~~~r~~~l~~~~~~~ 273 (424)
++..++............+|.+++++|++..++ + .++..+..++..++. ++.+||+||||.+ +...+++.
T Consensus 6 ~~~ly~~~g~~~~~~~p~lp~~l~~~g~~~~~iGl~~~~~l~~~~~~l~~p~~~~~~~~~~g~r~~~-----i~~~~~~~ 80 (390)
T TIGR02718 6 LGLLYLSQGIPIGLAMDALPTLLREDGAPLTALAFLPLVGLPWVVKFLWAPLVDNWWSWRLGRRRSW-----VLPMQCLV 80 (390)
T ss_pred HHHHHHHHHhHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhccccccCCcchhH-----HHHHHHHH
Confidence 333444333333445567899999999998876 3 355577777777776 5578888877653 12222222
Q ss_pred HHHHHHHH---h--chhHHHHHHHHHHHHHhhhhHhHHHHHHHHhhCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 014462 274 AFALLYYA---I--GWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIASGIYDY 348 (424)
Q Consensus 274 ~~~~ll~~---~--~~~~~l~~~~~l~G~~~G~~~~~~~~~~se~fg~~~~g~~~g~~~~~~~lgs~l~~~~l~g~l~d~ 348 (424)
+.....++ . ....++.....+.+++...+....-.+..|..+.++++...+....+..+|..+ ++.+.+.+.+.
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~d~~~d~~~~~~~~~~~~~~~~~~~~~g~~lG~~~-g~~~~~~l~~~ 159 (390)
T TIGR02718 81 SACLASLALVGPDVAGAGWAVGLLACASLASATQDIATDGMAAEHFNGRTLAKGNAVQIAGVMIGFFG-GGAGTLVLFGK 159 (390)
T ss_pred HHHHHHHHcCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhhhhHHHHHHHHHHHHHHHH-HHHHHHHHHHH
Confidence 21111121 1 112233334444556666666777778889998888888888888888888887 88888899988
Q ss_pred hhhhhhhhhhhccCCCCCcccCCCCCCcccCCcchHHHHHHHHHHHHHHHHHHHHHh
Q 014462 349 YAEKQAGLLWKYNGNMLPVSFRDQETPTCLGSICYSITCGIMAGLCIIAMVMSLIVV 405 (424)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~g~~c~~~~f~i~a~~~~~~~~l~~~l~ 405 (424)
.+ |+.+|++.+++.++..+..+++.
T Consensus 160 ~g--------------------------------w~~~f~~~a~l~~~~~~~~~~~~ 184 (390)
T TIGR02718 160 FG--------------------------------QRPAFLLVACVPLASLVCVLWLK 184 (390)
T ss_pred hC--------------------------------HHHHHHHHHHHHHHHHHHHHHcC
Confidence 77 99999999998887776665543
No 179
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=98.83 E-value=2.6e-08 Score=98.91 Aligned_cols=141 Identities=16% Similarity=0.144 Sum_probs=101.4
Q ss_pred CHHHhhhhHHHHHHHHHHHHhhhhHHHHHhcHHHHHHH-cCCCchhH--HHHHHHHHhhhhhhhhhhhhhhhhhcccCch
Q 014462 186 TLPQALMKADFLLLFFSLVLASGSGLTVIDNLGQICQS-LGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPR 262 (424)
Q Consensus 186 t~~~~l~~~~fwll~~~~~~~~~~~~~~~~~l~~i~~~-~g~s~~~~--~~sl~si~~~~gr~~~G~lsd~~g~k~~~~r 262 (424)
+.++.++++++|.+.+..++..+....+..++|++.++ +|+++.+. +.++..+.+.++++.+|+++||+++|+..
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~-- 294 (366)
T TIGR00886 217 DQLKVFRDRHTWILALLYSVTFGSFLGVSSIFAMFFKDQFGLSKVTAGAYASLGGLLGSLARPLGGAISDRLGGARKL-- 294 (366)
T ss_pred HHHHHHhccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHhhccchHHHhhccchhH--
Confidence 45678889999998888887777777778888998876 68887544 77788899999999999999999987644
Q ss_pred hHHHHHHHHHHHHHHHHH--Hhc---hhHHHHHHHHHHHHHhhhhHhHHHHHHHHhhCcchhhHHHHHHHHHHHHH
Q 014462 263 PVAMAVAQVVMAFALLYY--AIG---WPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAG 333 (424)
Q Consensus 263 ~~~l~~~~~~~~~~~ll~--~~~---~~~~l~~~~~l~G~~~G~~~~~~~~~~se~fg~~~~g~~~g~~~~~~~lg 333 (424)
..+..+.+.+..++ ... +....++...+.+++.|...+...+.++++++ +++|+.+|+.+....+|
T Consensus 295 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~g 365 (366)
T TIGR00886 295 ----LMSFLGVAMGAFLVVLGLVSPLSLAVFIVLFVALFFFSGAGNGSTFALVPHIFR-RATGAVSGLVGAIGNLG 365 (366)
T ss_pred ----HHHHHHHHHHHHHHHhcCCCcchHHHHHHHHHHHHHHhccccchhhhcchhhch-hhcccHHHHHHHhccCC
Confidence 22222333332222 222 33334445555566666666777788888885 78999999988877765
No 180
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=98.83 E-value=1.4e-07 Score=93.92 Aligned_cols=132 Identities=18% Similarity=0.225 Sum_probs=96.5
Q ss_pred HHhhhhhhhhhhhhhhhhhcccCchhHHHHHHHHHHHHHHHHHHhc-hh--------HHHHHHHHHHHHHhhhhHhHHHH
Q 014462 238 IWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVMAFALLYYAIG-WP--------GEIYVTTVLVGLSYGAHWAIVPA 308 (424)
Q Consensus 238 i~~~~gr~~~G~lsd~~g~k~~~~r~~~l~~~~~~~~~~~ll~~~~-~~--------~~l~~~~~l~G~~~G~~~~~~~~ 308 (424)
+...++.+..|+++||+|||+.+ .++.++++++.+++... +. ..+++..++.|++.|..++..+.
T Consensus 46 ~~~~i~~~~~G~l~dr~g~r~~l------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~ 119 (394)
T TIGR00883 46 LARPLGAIVFGHFGDRIGRKKTL------VITLLMMGIGTLLIGLLPSYATIGIWAPILLLLARLIQGFSLGGEWGGAAL 119 (394)
T ss_pred HHhhhHHHHhhhhhhhhhhHHHH------HHHHHHHHHHHHHHhhCCChhhhHHHHHHHHHHHHHHHHhhccccccccHH
Confidence 44457899999999999998755 55666666666555432 22 23677789999999999999999
Q ss_pred HHHHhhCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhccCCCCCcccCCCCCCcccCCcchHHHHH
Q 014462 309 AASELFGLKSFGALYNFLTLASPAGSLIFSGVIASGIYDYYAEKQAGLLWKYNGNMLPVSFRDQETPTCLGSICYSITCG 388 (424)
Q Consensus 309 ~~se~fg~~~~g~~~g~~~~~~~lgs~l~~~~l~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~g~~c~~~~f~ 388 (424)
+++|.++.++|+...++...+..+|..+ ++.+.+.+.+..+... .....|+..|+
T Consensus 120 ~~~~~~~~~~r~~~~~~~~~~~~~G~~i-~~~~~~~~~~~~~~~~------------------------~~~~~w~~~~~ 174 (394)
T TIGR00883 120 YLAEYAPPGKRGFYGSFQQVGAPVGLLL-AALTVLLLSYLLGDDA------------------------LLEWGWRIPFL 174 (394)
T ss_pred HhhhcCCcccchHHHHHHHHHHHHHHHH-HHHHHHHHHHhcCHHH------------------------hhccchHHHHH
Confidence 9999999999999999999999999987 7877776544222100 00013999999
Q ss_pred HHHHHHHHHHHH
Q 014462 389 IMAGLCIIAMVM 400 (424)
Q Consensus 389 i~a~~~~~~~~l 400 (424)
+.+.+++++..+
T Consensus 175 ~~~~~~~~~~~~ 186 (394)
T TIGR00883 175 VSAVLVLIGLYL 186 (394)
T ss_pred HHHHHHHHHHHH
Confidence 887766665443
No 181
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=98.82 E-value=1.4e-07 Score=93.90 Aligned_cols=156 Identities=17% Similarity=0.175 Sum_probs=117.2
Q ss_pred CHHHhhhhHHHHHHHHHHHHhhhhHHHHHhcHHHHHHH-cCCCchhH--HHHHHHHHhhhhhhhhhhhhhhhhhcccCch
Q 014462 186 TLPQALMKADFLLLFFSLVLASGSGLTVIDNLGQICQS-LGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPR 262 (424)
Q Consensus 186 t~~~~l~~~~fwll~~~~~~~~~~~~~~~~~l~~i~~~-~g~s~~~~--~~sl~si~~~~gr~~~G~lsd~~g~k~~~~r 262 (424)
+..++++++.++...++.||..|.....-+++++++.+ .|.++.++ +++.+.++-++||..+.++..|+-..|.+
T Consensus 228 ~~~~l~~~~~~~~gvl~~FlYVG~Eva~gsfl~~y~~~~~g~~~~~aa~~~s~~~~~~~vGRFig~~lm~~~~~~k~L-- 305 (422)
T COG0738 228 GLSSLFQNKHLRLGVLAIFLYVGAEVAIGSFLVSYLEELLGLNEQQAAYYLSFFWVGFMVGRFIGSALMSRIKPEKYL-- 305 (422)
T ss_pred hHHHHHhChHHHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHH--
Confidence 58889999999999999999999999999999999988 78777654 99999999999998888888888654433
Q ss_pred hHHHHHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHhhhhHhHHHHHHHHhhCcchhhHHHHHHHHHHHHHHHHHHHHHH
Q 014462 263 PVAMAVAQVVMAFALLYYAIGWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIA 342 (424)
Q Consensus 263 ~~~l~~~~~~~~~~~ll~~~~~~~~l~~~~~l~G~~~G~~~~~~~~~~se~fg~~~~g~~~g~~~~~~~lgs~l~~~~l~ 342 (424)
...+.+...+........+... ....++.|+.++..|+...+...+..| ++-. ..+.......+|+.+ -|.+.
T Consensus 306 ---af~a~~~ill~~~~~l~~g~v~-~~~l~~ig~F~simfPTIfslal~~l~-~~ts-~~s~~l~maivGGAi-iP~l~ 378 (422)
T COG0738 306 ---AFYALIAILLLLAVALIGGVVA-LYALFLIGLFNSIMFPTIFSLALKNLG-EHTS-VGSGLLVMAIVGGAI-IPPLQ 378 (422)
T ss_pred ---HHHHHHHHHHHHHHHHhcChHH-HHHHHHHHHHhHHHHHHHHHHHHhccC-cccc-ccceeeeeheecchH-HHHHH
Confidence 2222222222211122334333 446778899999999999999999998 5444 444444555677777 59999
Q ss_pred HHHHhhhh
Q 014462 343 SGIYDYYA 350 (424)
Q Consensus 343 g~l~d~~~ 350 (424)
|++.|+.+
T Consensus 379 G~i~d~~g 386 (422)
T COG0738 379 GVIADMFG 386 (422)
T ss_pred HHHHHhhh
Confidence 99999988
No 182
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=98.81 E-value=4.1e-07 Score=95.79 Aligned_cols=179 Identities=12% Similarity=0.074 Sum_probs=127.1
Q ss_pred hhhhHHHHHHHHHHHHhhhhHHHHHhcHHHHHHH-cCCCchhH--HHHHHHHHhhhhhhhhhhhhhhhhhcccCchhHHH
Q 014462 190 ALMKADFLLLFFSLVLASGSGLTVIDNLGQICQS-LGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAM 266 (424)
Q Consensus 190 ~l~~~~fwll~~~~~~~~~~~~~~~~~l~~i~~~-~g~s~~~~--~~sl~si~~~~gr~~~G~lsd~~g~k~~~~r~~~l 266 (424)
..+++....+....++.......+...+|.+.++ +|.++... +.+..++|..+|.++.+++.+++.+++.+
T Consensus 214 v~~~~~l~~~l~~~~~~~l~~~a~~aLlPl~a~~~l~~~a~~yGll~a~~gvGai~Gal~~~~l~~~~~~~~lv------ 287 (524)
T PF05977_consen 214 VRSSPPLRSVLLRSFLFNLFASAVWALLPLFARDVLGGGASGYGLLLAAFGVGAILGALLLPRLRRRLSSRRLV------ 287 (524)
T ss_pred HhcchHHHHHHHHHHHHHHhhhHHHHhhhHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhcccCcchhh------
Confidence 3345555544433333333333344557888765 77776543 88888999999999888887777655433
Q ss_pred HHHHHHHHHHHHHHHh-chhHHHHHHHHHHHHHhhhhHhHHHHHHHHhhCcchhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 014462 267 AVAQVVMAFALLYYAI-GWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIASGI 345 (424)
Q Consensus 267 ~~~~~~~~~~~ll~~~-~~~~~l~~~~~l~G~~~G~~~~~~~~~~se~fg~~~~g~~~g~~~~~~~lgs~l~~~~l~g~l 345 (424)
..+.++.+++.+.++. .+.+...+..++.|++.....+...+.+.+..|.+.+|+..++..+....+..+ |..+.|.+
T Consensus 288 ~~~~~~~a~~~~~lal~~~~~~~~~~l~l~G~~~~~~~~~~~t~~Q~~~P~~~~GRv~si~~~~~~g~~~l-Gsll~G~l 366 (524)
T PF05977_consen 288 LLASLLFALALLLLALSPSFWLALIALFLAGAAWIIANSSLNTLVQLSVPDWVRGRVFSIYQMVFFGGMPL-GSLLWGFL 366 (524)
T ss_pred HHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhHHHHHHHHHHHHHHHH-HHHHHHHH
Confidence 4555666666666654 345566778888899999988899999999999999999999999888877776 89999999
Q ss_pred HhhhhhhhhhhhhhccCCCCCcccCCCCCCcccCCcchHHHHHHHHHHHHHHHHHHHHHhhh
Q 014462 346 YDYYAEKQAGLLWKYNGNMLPVSFRDQETPTCLGSICYSITCGIMAGLCIIAMVMSLIVVHR 407 (424)
Q Consensus 346 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~g~~c~~~~f~i~a~~~~~~~~l~~~l~~~ 407 (424)
.|..+ .+.++.+.++..+++.++......+
T Consensus 367 a~~~g--------------------------------~~~al~~a~~~lll~~~~~~~~~l~ 396 (524)
T PF05977_consen 367 ADHFG--------------------------------VRTALLIAGAALLLSALIALRFPLR 396 (524)
T ss_pred HHHhC--------------------------------HHHHHHHHHHHHHHHHHHHHHhcCc
Confidence 99887 6777877776666666555544433
No 183
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=98.81 E-value=5.9e-08 Score=97.01 Aligned_cols=173 Identities=16% Similarity=0.139 Sum_probs=123.9
Q ss_pred HHHHHHHHHHHhhhhHHHHHhcHHHHHHHcCCCchhH--HHHHHHHHhhhhhhhhhhhhhhhhhcccCchhHHHHHHHHH
Q 014462 195 DFLLLFFSLVLASGSGLTVIDNLGQICQSLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVV 272 (424)
Q Consensus 195 ~fwll~~~~~~~~~~~~~~~~~l~~i~~~~g~s~~~~--~~sl~si~~~~gr~~~G~lsd~~g~k~~~~r~~~l~~~~~~ 272 (424)
.+|+-++++..+...........+++-+++|+|+.+. ++++..+...+.|+.-|++.||+|.|+.. .+.+++
T Consensus 15 ~L~~S~~af~v~F~VW~l~s~l~~~i~~~~~LS~~q~~ll~aiPil~GallRl~~g~l~drfGgR~~~------~~s~~l 88 (417)
T COG2223 15 NLWLSTLAFDVGFMVWTLFSPLGVFIKSDFGLSEGQKGLLVAIPILVGALLRLPYGFLTDRFGGRKWT------ILSMLL 88 (417)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhccccCCCHHHHHHHHHHHHHHhHHHHHHHHhhhcccCchHHH------HHHHHH
Confidence 3455444444443333333334455567799998876 88899999999999999999999988765 566666
Q ss_pred HHHHHHHHHh----chhHHHHHHHHHHHHHhhhhHhHHHHHHHHhhCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 014462 273 MAFALLYYAI----GWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIASGIYDY 348 (424)
Q Consensus 273 ~~~~~ll~~~----~~~~~l~~~~~l~G~~~G~~~~~~~~~~se~fg~~~~g~~~g~~~~~~~lgs~l~~~~l~g~l~d~ 348 (424)
+.+.++.++. .+.+.+++..++.|++ |+.+++....++..||+++.|.+.|+.. +.++|..+ ...++-.+...
T Consensus 89 ~~IP~~~~~~a~~~~~~~~ll~~gll~G~~-GasFav~m~~~s~~fP~~~qG~AlGI~g-~GN~G~av-~q~~~P~v~~~ 165 (417)
T COG2223 89 LLIPCLGLAFAVTYPSTWQLLVIGLLLGLA-GASFAVGMPNASFFFPKEKQGLALGIAG-AGNLGVAV-AQLVAPLVAVA 165 (417)
T ss_pred HHHHHHHHHHHccCCchHHHHHHHHHHhcc-cceehcccccccccCChhhhhHHHHHhc-cccccHHH-HHHHHHHHHHH
Confidence 6666665542 2234777788888887 5677788899999999999999999988 77888776 55555555544
Q ss_pred hhhhhhhhhhhccCCCCCcccCCCCCCcccCCcchHHHHHHHHHHHHHHHHHHHHHh
Q 014462 349 YAEKQAGLLWKYNGNMLPVSFRDQETPTCLGSICYSITCGIMAGLCIIAMVMSLIVV 405 (424)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~g~~c~~~~f~i~a~~~~~~~~l~~~l~ 405 (424)
.+.. -|+.+..+.....++++++.++..
T Consensus 166 ~g~~-----------------------------~w~~~~~i~~~~l~v~~v~~~~~~ 193 (417)
T COG2223 166 FGFL-----------------------------AWRNVAGIYVVALAIAAVLAWLGM 193 (417)
T ss_pred HhhH-----------------------------HHHHHHHHHHHHHHHHHHHHHHHh
Confidence 4410 188888888888887777766554
No 184
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.80 E-value=2.3e-07 Score=96.72 Aligned_cols=131 Identities=11% Similarity=0.020 Sum_probs=91.9
Q ss_pred CCCCHHHhhhhHHHHHHHHHHHHhhhhHHHHHhcHHHHHHH-cCCCchhH--HHHHHHHHhhhhhhhhhhhhhhhh---h
Q 014462 183 EDFTLPQALMKADFLLLFFSLVLASGSGLTVIDNLGQICQS-LGYADTSI--YVSMISIWNFLGRVGGGYFSEAIV---R 256 (424)
Q Consensus 183 ~~~t~~~~l~~~~fwll~~~~~~~~~~~~~~~~~l~~i~~~-~g~s~~~~--~~sl~si~~~~gr~~~G~lsd~~g---~ 256 (424)
+..+++++++++..|.+.+..+|......++.+++|.+.++ .|++..++ +.+...+++++|.+++|+++||+. +
T Consensus 262 ~~~~~~~a~~dp~vw~~~l~~~~~~lv~~~~~~~lpl~l~~~~~~s~~~a~~ls~~~~~~g~v~~i~ag~lsdr~~~~~~ 341 (495)
T KOG2533|consen 262 KWKGFKEALKDPGVWPFSLCYFFLKLVNYGFSYWLPLYLKSNGGYSELQANLLSTPYDVGGIVGLILAGYLSDRLKTIFA 341 (495)
T ss_pred CHHHHHHHHhchhHHHHHHHHHHHhhccccHHHHHHHHHHcCCCcChHHhccccchHHhhhHHHHHHHHHHHHHHhhhHH
Confidence 34568889999999999999999999999999999999988 56887655 888999999999999999999963 2
Q ss_pred cccCchhHHHHHHHHHHHHHHHHHH-hchhHHHHHHHHHHHHHhhhhHhHHHHHHHHhhCcc
Q 014462 257 KFAYPRPVAMAVAQVVMAFALLYYA-IGWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLK 317 (424)
Q Consensus 257 k~~~~r~~~l~~~~~~~~~~~ll~~-~~~~~~l~~~~~l~G~~~G~~~~~~~~~~se~fg~~ 317 (424)
++. .+.....+...++...+. .......+.+......+.+...+....-+++.....
T Consensus 342 ~~~----~~~~~~~~~~~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~s~~~~g~ 399 (495)
T KOG2533|consen 342 RRL----LFIVFLCLYAIIGAISLLAAAVLPGAYGAFLIGPYGLIATAIIALSWTSANLAGN 399 (495)
T ss_pred HHH----HHHHHHHHHHHHHHHHHHhhccchHHhHHHHhcchhhHHHHHHHHhhccccccch
Confidence 221 233344455555544433 322344444444444555555555556666665433
No 185
>PRK11462 putative transporter; Provisional
Probab=98.79 E-value=4.3e-06 Score=86.87 Aligned_cols=158 Identities=9% Similarity=0.078 Sum_probs=96.9
Q ss_pred HHHhhhhHHHHHHHHHHHHhhhhHHHHHhcHHHHHHH-cCCCch-hHHHHHHHHHhhhhhhhhhhhhhhhhhcccCchhH
Q 014462 187 LPQALMKADFLLLFFSLVLASGSGLTVIDNLGQICQS-LGYADT-SIYVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPV 264 (424)
Q Consensus 187 ~~~~l~~~~fwll~~~~~~~~~~~~~~~~~l~~i~~~-~g~s~~-~~~~sl~si~~~~gr~~~G~lsd~~g~k~~~~r~~ 264 (424)
++..++++.++.+....++.............++.+. .|.+.. ..+.....+.+.+|.+++++++||+++|+..
T Consensus 221 l~~~~~Nk~~~~l~~~~~~~~~~~~~~~~~~~y~~~y~~g~~~~~~~~l~~~~i~~iig~~l~~~l~~r~gkk~~~---- 296 (460)
T PRK11462 221 LRDIWQNDQWRIVGLLTIFNILAVCVRGGAMMYYVTWILGTPEVFVAFLTTYCVGNLIGSALAKPLTDWKCKVTIF---- 296 (460)
T ss_pred HHHHhCChHHHHHHHHHHHHHHHHHHHHhHhhhhhhhhcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHH----
Confidence 3446778877766655544443333333333344444 343332 2366677888999999999999999987543
Q ss_pred HHHHHHHHHHHHHHHHHh--chhHHHHHHHHHHHHHhhhhHhHHHHHHHHhh-------CcchhhHHHHHHHHHHHHHHH
Q 014462 265 AMAVAQVVMAFALLYYAI--GWPGEIYVTTVLVGLSYGAHWAIVPAAASELF-------GLKSFGALYNFLTLASPAGSL 335 (424)
Q Consensus 265 ~l~~~~~~~~~~~ll~~~--~~~~~l~~~~~l~G~~~G~~~~~~~~~~se~f-------g~~~~g~~~g~~~~~~~lgs~ 335 (424)
. .........+.+++.. .+...+++..++.|++.+...++.+++++|.. |.++-|..++......-+|..
T Consensus 297 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~l~~~m~ad~~d~~e~~tG~r~~g~~~a~~~f~~Klg~a 375 (460)
T PRK11462 297 W-WTNALLAVISLAMFFVPMQASITMFVFIFVIGVLHQLVTPIQWVMMSDTVDYGEWCNGKRLTGISFAGTLFVLKLGLA 375 (460)
T ss_pred H-HHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhHHhcCCCchHHHHHHHHHHHHHHHH
Confidence 1 1111111112222222 22223455566678877777766666766664 356668888888889999999
Q ss_pred HHHHHHHHHHHhhhh
Q 014462 336 IFSGVIASGIYDYYA 350 (424)
Q Consensus 336 l~~~~l~g~l~d~~~ 350 (424)
+ ++.+.|.+.+..|
T Consensus 376 l-g~~i~g~iL~~~G 389 (460)
T PRK11462 376 F-GGALIGWMLAYGG 389 (460)
T ss_pred H-HHHHHHHHHHHcC
Confidence 7 8999998887654
No 186
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=98.77 E-value=6e-08 Score=101.99 Aligned_cols=127 Identities=14% Similarity=0.012 Sum_probs=107.0
Q ss_pred HHHHHHHHhhhhhhhhhhhhhhhhhcccCchhHHHHHHHHHHHHHHHHHH-hchhHHHHHHHHHHHHHhhhhHhHHHHHH
Q 014462 232 YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVMAFALLYYA-IGWPGEIYVTTVLVGLSYGAHWAIVPAAA 310 (424)
Q Consensus 232 ~~sl~si~~~~gr~~~G~lsd~~g~k~~~~r~~~l~~~~~~~~~~~ll~~-~~~~~~l~~~~~l~G~~~G~~~~~~~~~~ 310 (424)
..+++.++..+|.++.|+++|++|||+.+ .++.++..++.+..+ ..+.+.+.+..++.|++.++..++...++
T Consensus 123 ~~s~~~~G~~vG~~i~g~lsD~~GRk~~~------~~~~~~~~i~~~~~a~a~~~~~~~~~Rfl~G~~~~~~~~~~~~~~ 196 (521)
T KOG0255|consen 123 GQSLFFLGVLVGSLIFGPLSDRFGRKPVL------LVSLLLFIIFGILTAFAPNYWMFLIFRFLSGFFGSGPLTVGFGLV 196 (521)
T ss_pred HHHHHHHHHHHHHhhheehHhhcccHHHH------HHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHhhccchhHHhHhhh
Confidence 77888999999999999999999999765 666666666665555 45677889999999999999999999999
Q ss_pred HHhhCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhccCCCCCcccCCCCCCcccCCcchHHHHHHH
Q 014462 311 SELFGLKSFGALYNFLTLASPAGSLIFSGVIASGIYDYYAEKQAGLLWKYNGNMLPVSFRDQETPTCLGSICYSITCGIM 390 (424)
Q Consensus 311 se~fg~~~~g~~~g~~~~~~~lgs~l~~~~l~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~g~~c~~~~f~i~ 390 (424)
+|++++|+|+.+.++ ......++.+ ++.+++++.. + ||+.+++.
T Consensus 197 ~E~~~~~~R~~~~~~-~~~~~~~~~~-~~~~~a~~~~--~--------------------------------Wr~~~~~~ 240 (521)
T KOG0255|consen 197 AEIVSPKQRGLALTL-GGFFFVGGLM-LPAGAAYITR--D--------------------------------WRWLFWII 240 (521)
T ss_pred eeecCcchhhHHHHH-HHHHHHHHHH-HHHHHHHHHh--h--------------------------------HHHHHHHH
Confidence 999999999999999 7677777776 6888887765 3 99999999
Q ss_pred HHHHHHHHHH
Q 014462 391 AGLCIIAMVM 400 (424)
Q Consensus 391 a~~~~~~~~l 400 (424)
....++.++.
T Consensus 241 ~~~~~~~~~~ 250 (521)
T KOG0255|consen 241 SIPSGLFLLL 250 (521)
T ss_pred HHHHHHHHHH
Confidence 9888877666
No 187
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=98.75 E-value=1.3e-07 Score=99.41 Aligned_cols=133 Identities=19% Similarity=0.197 Sum_probs=108.7
Q ss_pred hHHHHHHHHHhhhhhhhhhhhhhhhhhcccCchhHHHHHHHHHHHHHHHHHH-hchhHHHHHHHHHHHHHhhhhHhHHHH
Q 014462 230 SIYVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVMAFALLYYA-IGWPGEIYVTTVLVGLSYGAHWAIVPA 308 (424)
Q Consensus 230 ~~~~sl~si~~~~gr~~~G~lsd~~g~k~~~~r~~~l~~~~~~~~~~~ll~~-~~~~~~l~~~~~l~G~~~G~~~~~~~~ 308 (424)
+++.+...+++.+|.+.+|+++|++|||+.+ .++.++..++.++.+ ..+...++++.++.|+|.|....+.+.
T Consensus 92 s~~~s~~~lga~~g~l~~g~l~d~~GRk~~l------~~~~~~~~iG~ii~~~a~~~~~l~~GR~l~G~g~G~~~~~~pi 165 (513)
T KOG0254|consen 92 GLLTSILNLGALVGSLLAGRLGDRIGRKKTL------LLAVVLFLIGAIIIALAPSWYQLIVGRILTGLGVGGASVLAPV 165 (513)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhHHHH------HHHHHHHHHHHHHHHHhhhHHHHHHHHHHhccchhhhhhcchh
Confidence 4699999999999999999999999999765 666777777777665 346778999999999999999999999
Q ss_pred HHHHhhCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhccCCCCCcccCCCCCCcccCCcchHHHHH
Q 014462 309 AASELFGLKSFGALYNFLTLASPAGSLIFSGVIASGIYDYYAEKQAGLLWKYNGNMLPVSFRDQETPTCLGSICYSITCG 388 (424)
Q Consensus 309 ~~se~fg~~~~g~~~g~~~~~~~lgs~l~~~~l~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~g~~c~~~~f~ 388 (424)
+++|+-|++.||...++......+|..+ + ++.|...++.. ..||..+.
T Consensus 166 y~sEiap~~~RG~l~~~~~l~~~~Gi~~-~-~~~~~~~~~~~------------------------------~~Wr~~~~ 213 (513)
T KOG0254|consen 166 YISEIAPAHIRGTLVSLYQLFITIGILL-G-YCINYGTSKVY------------------------------AGWRIPLG 213 (513)
T ss_pred hHhhcCChhhhHHHHHHHHHHHHHHHHH-H-HHHhhhhccCC------------------------------ccHHHHHH
Confidence 9999999999999999999999877765 5 55565443320 12998888
Q ss_pred HHHHHHHHHHHH
Q 014462 389 IMAGLCIIAMVM 400 (424)
Q Consensus 389 i~a~~~~~~~~l 400 (424)
+....+++-.+.
T Consensus 214 ~~~i~~~~~~~~ 225 (513)
T KOG0254|consen 214 LALIPAVILALG 225 (513)
T ss_pred HHHHHHHHHHHH
Confidence 877777776666
No 188
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=98.73 E-value=3.9e-06 Score=84.70 Aligned_cols=153 Identities=12% Similarity=0.102 Sum_probs=97.6
Q ss_pred HhhhhHHHHHHHHHHHHhhhhHHHHHhcHHHHHHH-cCCCchhH--HHHHHHHHhhhhhhhhhhhhhhhhhcccCchhHH
Q 014462 189 QALMKADFLLLFFSLVLASGSGLTVIDNLGQICQS-LGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVA 265 (424)
Q Consensus 189 ~~l~~~~fwll~~~~~~~~~~~~~~~~~l~~i~~~-~g~s~~~~--~~sl~si~~~~gr~~~G~lsd~~g~k~~~~r~~~ 265 (424)
+.++++.+|......++.......+....+.+.++ +|++.... +.....++..+|.++.+++.||.+++. . .
T Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~-~----~ 276 (394)
T PRK11652 202 TLLSNRRFNCYLLMLIGTLAGIAVFEACSGVLMGAVLGLSSMTVSILFILPIPAAFFGAWFAGRPNKRFSTLM-W----Q 276 (394)
T ss_pred HHHcChHHHHHHHHHHHHHHHHHHHHHhChHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-H----H
Confidence 46677777765555444433333333445566666 78886543 445556667777777777777776321 1 1
Q ss_pred HHHHHHHHHHHHHHHH---hchhHHHHHHHHHHHHHhhhhHhHHHHHHHHhhCcchhhHHHHHHHHHHHHHHHHHHHHHH
Q 014462 266 MAVAQVVMAFALLYYA---IGWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIA 342 (424)
Q Consensus 266 l~~~~~~~~~~~ll~~---~~~~~~l~~~~~l~G~~~G~~~~~~~~~~se~fg~~~~g~~~g~~~~~~~lgs~l~~~~l~ 342 (424)
.....++..+..+... ..+.+.+....++.|++.|...+...+...+.++ +++|+..++.+....+|+.+ ++.++
T Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~lg~~~-~~~~~ 354 (394)
T PRK11652 277 SVICCLLAGLLMWIPGWFGVMNVWTLLVPAALFFFGAGMLFPLATSGAMEPFP-YLAGTAGALLGGLQNIGSGL-AALLS 354 (394)
T ss_pred HHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc-ccchHHHHHHHHHHHHHHHH-HHHHH
Confidence 1111122212111111 1234456667788899999999999999999996 67899999999999999997 88888
Q ss_pred HHHHhh
Q 014462 343 SGIYDY 348 (424)
Q Consensus 343 g~l~d~ 348 (424)
|.+.+.
T Consensus 355 ~~~~~~ 360 (394)
T PRK11652 355 AMLPQT 360 (394)
T ss_pred HHccCC
Confidence 876544
No 189
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=98.73 E-value=2.7e-07 Score=94.22 Aligned_cols=165 Identities=13% Similarity=0.181 Sum_probs=110.8
Q ss_pred hcHHHHHH-HcCCCchhH--HHHHHHHHhhhhhhhhhhhhhhhhhcccCchhHHHHHHHHHHHHHHHHHHh-ch------
Q 014462 215 DNLGQICQ-SLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVMAFALLYYAI-GW------ 284 (424)
Q Consensus 215 ~~l~~i~~-~~g~s~~~~--~~sl~si~~~~gr~~~G~lsd~~g~k~~~~r~~~l~~~~~~~~~~~ll~~~-~~------ 284 (424)
.+++++++ ++|.++..+ +.++..++.++..++.|+++||.++|+.-.|+ ++..+..+.+++.+++.. .+
T Consensus 20 ~~l~~~~~~~~g~s~~~~g~i~~~~~i~~~i~~p~~G~lsDr~~~r~Grrr~-~i~~~~~~~~i~~~~~~~~~~~~~~~~ 98 (437)
T TIGR00792 20 TYLLFFYTDVLGLSAAFVGTLFLVARILDAITDPIMGNIVDRTRTRWGKFRP-WLLIGAIPFSIVLVLLFTTPDFSATGK 98 (437)
T ss_pred HHHHHHHHHccCCCHHHHHHHHHHHHHHHHhccchheEeeecCCCCCCCcch-hHHHhHHHHHHHHHHHHhCCCCCcchH
Confidence 34555554 589988765 88889999999999999999996554322222 234444555554444332 11
Q ss_pred hHHHHHHHHHHHHHhhhhHhHHHHHHHHhh-CcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhccCC
Q 014462 285 PGEIYVTTVLVGLSYGAHWAIVPAAASELF-GLKSFGALYNFLTLASPAGSLIFSGVIASGIYDYYAEKQAGLLWKYNGN 363 (424)
Q Consensus 285 ~~~l~~~~~l~G~~~G~~~~~~~~~~se~f-g~~~~g~~~g~~~~~~~lgs~l~~~~l~g~l~d~~~~~~~~~~~~~~~~ 363 (424)
...+++..++.+++++....+..+...|+. +.++|++..++.+.+..+|+.+ ++.+.+.+....+.+.
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~R~~~~~~~~~~~~~g~~l-~~~~~~~l~~~~~~~~---------- 167 (437)
T TIGR00792 99 LVYAYITYILLGLFYSFVNIPYWSLVPAITLDPRERESLSTFRRFGATLGGLL-VAVIVLPLVSYFGGGD---------- 167 (437)
T ss_pred HHHHHHHHHHHHHHHHhhcccHhhCcccccCCHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHhCCCc----------
Confidence 234455566778888887778888888887 4678999999999998998886 5666666654332100
Q ss_pred CCCcccCCCCCCcccCCcchHHHHHHHHHHHHHHHHHHHHHhh
Q 014462 364 MLPVSFRDQETPTCLGSICYSITCGIMAGLCIIAMVMSLIVVH 406 (424)
Q Consensus 364 ~~~~~~~~~~~~~c~g~~c~~~~f~i~a~~~~~~~~l~~~l~~ 406 (424)
....|+..+.+.++++++..++.....+
T Consensus 168 ---------------~~~g~~~~~~i~~~l~~~~~~~~~~~~~ 195 (437)
T TIGR00792 168 ---------------DKFGWFMFALVLALIGVVSLIICFFGTK 195 (437)
T ss_pred ---------------ccccHHHHHHHHHHHHHHHHHHHHcCCE
Confidence 0113999999999888877666554443
No 190
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.71 E-value=7.1e-08 Score=99.99 Aligned_cols=143 Identities=14% Similarity=0.200 Sum_probs=117.0
Q ss_pred cCCCchh--HHHHHHHHHhhhhhhhhhhhhhhhhhcccCchhHHHHHHHHHHHHHHHHHH---hchhHHHHHHHHHHHHH
Q 014462 224 LGYADTS--IYVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVMAFALLYYA---IGWPGEIYVTTVLVGLS 298 (424)
Q Consensus 224 ~g~s~~~--~~~sl~si~~~~gr~~~G~lsd~~g~k~~~~r~~~l~~~~~~~~~~~ll~~---~~~~~~l~~~~~l~G~~ 298 (424)
+.++..+ .+.+....|..++.+.+|++.||+|.|+.. ..+.++.+++.++.. ....+.+.+..++.|++
T Consensus 68 ~~ws~~~k~~i~ss~~~G~i~~~iP~g~l~~k~G~r~v~------~~~~~~sa~~t~l~P~aa~~~~~~~~~~R~lqGl~ 141 (466)
T KOG2532|consen 68 YDWSSTEKGLIFSSFFWGYILGQIPGGYLADKFGARRVF------FISGLISALLTLLTPLAASIGFYLLLVLRFLQGLG 141 (466)
T ss_pred ecCCHHHHHHHHHHHHHHHHHHHcCcHHHHHHcCchHHH------HHHHHHHHHHHHHHHHHHHhcchhhHHHHHHhHHH
Confidence 3444433 389999999999999999999999988755 555555555555432 22334678899999999
Q ss_pred hhhhHhHHHHHHHHhhCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhh-hhhhhhhhhhhccCCCCCcccCCCCCCcc
Q 014462 299 YGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIASGIYDY-YAEKQAGLLWKYNGNMLPVSFRDQETPTC 377 (424)
Q Consensus 299 ~G~~~~~~~~~~se~fg~~~~g~~~g~~~~~~~lgs~l~~~~l~g~l~d~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~c 377 (424)
.|..++.+..+.+.+.|++++++..+++..+..+|.++ +-+++|++-+. .|
T Consensus 142 ~g~~~pa~~~i~~~W~P~~Ers~~~ail~~g~q~g~v~-~mp~sg~lc~s~~G--------------------------- 193 (466)
T KOG2532|consen 142 QGVLFPAIGSILAKWAPPNERSTFIAILTAGSQLGTII-TMPVSGLLCESSLG--------------------------- 193 (466)
T ss_pred HhHHHhhhhceeeeECCHHHHHHHHHHHHHHHHHHHHH-HHHhHHHHhccCCC---------------------------
Confidence 99999999999999999999999999999999999997 77799999887 44
Q ss_pred cCCcchHHHHHHHHHHHHHHHHHHHHHh
Q 014462 378 LGSICYSITCGIMAGLCIIAMVMSLIVV 405 (424)
Q Consensus 378 ~g~~c~~~~f~i~a~~~~~~~~l~~~l~ 405 (424)
|+.+|++.++++++-.++-.++.
T Consensus 194 -----W~sifY~~g~~g~i~~~~w~~~~ 216 (466)
T KOG2532|consen 194 -----WPSIFYVFGIVGLIWFILWFLFY 216 (466)
T ss_pred -----CchHHHHHHHHHHHHHHHHHHHh
Confidence 99999999998888766655554
No 191
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=98.70 E-value=2e-05 Score=82.60 Aligned_cols=153 Identities=13% Similarity=0.058 Sum_probs=104.0
Q ss_pred hHHHHHHHHHhhhhhhhhhhhhhhhhhcccCchh-HHHHHHHHHHHHHHHH-------HHh----chhHHHHHHHHHHHH
Q 014462 230 SIYVSMISIWNFLGRVGGGYFSEAIVRKFAYPRP-VAMAVAQVVMAFALLY-------YAI----GWPGEIYVTTVLVGL 297 (424)
Q Consensus 230 ~~~~sl~si~~~~gr~~~G~lsd~~g~k~~~~r~-~~l~~~~~~~~~~~ll-------~~~----~~~~~l~~~~~l~G~ 297 (424)
+.+.++..++..+..++.|++.||+++|+.-+++ .-+.++.++.+++++. +.. .+.+++....++.|+
T Consensus 312 ~~~~~~n~~~iii~~pl~~~l~~rl~~r~~~~~~~~k~~~G~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~i~~~~l~g~ 391 (489)
T PRK10207 312 VSFQALNPFWVVVASPILAGIYTHLGSKGKDLSMPMKFTLGMFLCSLGFLTAAAAGMWFADAQGLTSPWFIVLVYLFQSL 391 (489)
T ss_pred HHHHhHhHHHHHHHHHHHHHHHHHHhhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCHHHHHHHHHHHHH
Confidence 3466777788878888899999999988632221 2224455555555432 111 234567778999999
Q ss_pred HhhhhHhHHHHHHHHhhCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhccCCCCCcccCCCCCCcc
Q 014462 298 SYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIASGIYDYYAEKQAGLLWKYNGNMLPVSFRDQETPTC 377 (424)
Q Consensus 298 ~~G~~~~~~~~~~se~fg~~~~g~~~g~~~~~~~lgs~l~~~~l~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c 377 (424)
|.+...++..+.+.+..|++..|.+.++.++...+|+.+ |..+++........+ ++...+
T Consensus 392 Ge~~~~~~g~~~~~~~aP~~~~g~~~g~~~l~~~ig~~l-g~~l~~~~~~~~~~~--------------~~~~~~----- 451 (489)
T PRK10207 392 GELFISALGLAMIAALVPQHLMGFILGMWFLTQAAAFLL-GGYVATFTAVPDNIT--------------DPLETL----- 451 (489)
T ss_pred HHHHHhHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHH-HHHHHHHhccccccc--------------cchhhh-----
Confidence 999999999999999999999999999999999999997 777766442111100 000000
Q ss_pred cCCcchHHHHHHHHHHHHHHHHHHHHHh
Q 014462 378 LGSICYSITCGIMAGLCIIAMVMSLIVV 405 (424)
Q Consensus 378 ~g~~c~~~~f~i~a~~~~~~~~l~~~l~ 405 (424)
.-|.+.|...++.+++..++.+++.
T Consensus 452 ---~~~~~~f~~~~~~~~~~~v~~~~~~ 476 (489)
T PRK10207 452 ---PVYTNVFGKIGLVTLGVAVVMALMV 476 (489)
T ss_pred ---hhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0177888888887776666555543
No 192
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=98.69 E-value=6.4e-08 Score=95.46 Aligned_cols=108 Identities=19% Similarity=0.169 Sum_probs=91.4
Q ss_pred HHHHHHHHhhhhhhhhhhhhhhhhhcccCchhHHHHHHHHHHHHHHHHHHhc-hhHHHHHHHHHHHHHhhhhHhHHHHHH
Q 014462 232 YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVMAFALLYYAIG-WPGEIYVTTVLVGLSYGAHWAIVPAAA 310 (424)
Q Consensus 232 ~~sl~si~~~~gr~~~G~lsd~~g~k~~~~r~~~l~~~~~~~~~~~ll~~~~-~~~~l~~~~~l~G~~~G~~~~~~~~~~ 310 (424)
+-|.+++..++..+.+|.++|++|||..+ .++.+..++..++.+.. +...+.++.++.|+..|-. ++.-+++
T Consensus 73 lGSsF~ilQ~~sS~~~G~~SD~yGRkpvl------l~c~~~va~s~ll~~~S~~F~afv~aR~l~Gi~kgnl-~v~rAii 145 (451)
T KOG2615|consen 73 LGSSFSILQFISSPLWGCLSDRYGRKPVL------LACLIGVALSYLLWALSRNFAAFVLARFLGGIFKGNL-SVIRAII 145 (451)
T ss_pred HhhHHHHHHHHhhhhhhhhhhhhCchHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCch-HHHHHHH
Confidence 78899999999999999999999999654 66666666666665543 3445666699999998766 5788999
Q ss_pred HHhhCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 014462 311 SELFGLKSFGALYNFLTLASPAGSLIFSGVIASGIYD 347 (424)
Q Consensus 311 se~fg~~~~g~~~g~~~~~~~lgs~l~~~~l~g~l~d 347 (424)
+|+++.|+++.+.+.+.++.++|-++ ||.++|++..
T Consensus 146 sdV~sek~r~l~ms~v~~a~~lGfil-GPmIGgyla~ 181 (451)
T KOG2615|consen 146 SDVVSEKYRPLGMSLVGTAFGLGFIL-GPMIGGYLAQ 181 (451)
T ss_pred HhhcChhhccceeeeeehhhhcchhh-cchhhhHHHh
Confidence 99999999999999999999999998 9999999887
No 193
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=98.66 E-value=5.6e-11 Score=122.15 Aligned_cols=161 Identities=16% Similarity=0.168 Sum_probs=106.6
Q ss_pred HHhcHHHHHHHcCCCchhHHHHHHHHHhhhhhhhhhhhhhhhhhcccCchhHHHHHHHHHHHHHHHHHH------hch--
Q 014462 213 VIDNLGQICQSLGYADTSIYVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVMAFALLYYA------IGW-- 284 (424)
Q Consensus 213 ~~~~l~~i~~~~g~s~~~~~~sl~si~~~~gr~~~G~lsd~~g~k~~~~r~~~l~~~~~~~~~~~ll~~------~~~-- 284 (424)
..++.+++.++.|.+.......+..+...++.+++.++.||+|||+.. ..+..+++++.+.+. ...
T Consensus 272 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GRr~~~------i~~~~~~~~~~~~~~~~~~~~~~~~~ 345 (451)
T PF00083_consen 272 IFYYSPSIFENAGISNSFLATLILGLVNFLGTLLAIFLIDRFGRRKLL------IIGLLLMAICSLILGIIFFLGVSSSS 345 (451)
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccc------cccccccccccccccccccccccccc
Confidence 334566677777777663355566677888889999999999999755 333444333333221 111
Q ss_pred --hHHHHHHHHHHHHHhhh-hHhHHHHHHHHhhCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhcc
Q 014462 285 --PGEIYVTTVLVGLSYGA-HWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIASGIYDYYAEKQAGLLWKYN 361 (424)
Q Consensus 285 --~~~l~~~~~l~G~~~G~-~~~~~~~~~se~fg~~~~g~~~g~~~~~~~lgs~l~~~~l~g~l~d~~~~~~~~~~~~~~ 361 (424)
.....+...+...+++. ..++.+.+++|+||++.|++..++......+++++ ++.+...+.+..+
T Consensus 346 ~~~~~~i~~~~l~~~~~~~g~~~~~~~~~~ElfPt~~R~~~~~~~~~~~~i~~~i-~~~~~~~~~~~~~----------- 413 (451)
T PF00083_consen 346 WWSILSIVFLALFFAFFSLGWGPLPWIYTAELFPTKVRSTGIGLSYAVGRIGGFI-IPFLFPYLFNNLG----------- 413 (451)
T ss_pred ccccccceeeeeccccccccccccccccccccccccccccccccccccccccccc-ccccccccccccc-----------
Confidence 11222233333333442 33455588899999999999999999999999987 7877776665544
Q ss_pred CCCCCcccCCCCCCcccCCcchHHHHHHHHHHHHHHHHHHHHHhhhhhHHH
Q 014462 362 GNMLPVSFRDQETPTCLGSICYSITCGIMAGLCIIAMVMSLIVVHRTKSVY 412 (424)
Q Consensus 362 ~~~~~~~~~~~~~~~c~g~~c~~~~f~i~a~~~~~~~~l~~~l~~~~~~~~ 412 (424)
....|.+.+++++++.+...++..+||...
T Consensus 414 ---------------------~~~~~~i~~~~~~i~~i~~~~~lpET~g~~ 443 (451)
T PF00083_consen 414 ---------------------GWGVFLIFAGVCLIAIIFVYFFLPETKGKT 443 (451)
T ss_pred ---------------------ccccchhhHHHHHHHHhheeEEEeeCCCCC
Confidence 245677777778888877777778887643
No 194
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.65 E-value=3.3e-07 Score=95.47 Aligned_cols=143 Identities=14% Similarity=0.212 Sum_probs=111.8
Q ss_pred HHHHHHHHHhhhhhhhhhhhhhhhhhcccCchhHHHHHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHhhhhHhHHHHHH
Q 014462 231 IYVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVMAFALLYYAIGWPGEIYVTTVLVGLSYGAHWAIVPAAA 310 (424)
Q Consensus 231 ~~~sl~si~~~~gr~~~G~lsd~~g~k~~~~r~~~l~~~~~~~~~~~ll~~~~~~~~l~~~~~l~G~~~G~~~~~~~~~~ 310 (424)
...+++.++..+|.+.+|++.||+.-.+.+ ...+.+...++.+.....+.+.+.+..++.|++-++.|+....++
T Consensus 85 ~~~t~F~v~Yii~~~p~~~L~~r~~ls~~l-----~~~~~~w~~~~~~~~~~~s~~~~ialr~llGl~es~~wP~~~~~l 159 (495)
T KOG2533|consen 85 VLDTVFYVGYIIGQFPSGLLGDRFPLSKGL-----SVSGILWGLFGFLTAAVHSFPGLIALRFLLGLFESGGWPGVVAIL 159 (495)
T ss_pred hHHHHHHHHHHHHHhhHHHHHHhCChHHHH-----HHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcccchHHHHHH
Confidence 488999999999999999999999733222 122222222332333356778889999999999999999999999
Q ss_pred HHhhCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhccCCCCCcccCCCCCCcccCCcchHHHHHHH
Q 014462 311 SELFGLKSFGALYNFLTLASPAGSLIFSGVIASGIYDYYAEKQAGLLWKYNGNMLPVSFRDQETPTCLGSICYSITCGIM 390 (424)
Q Consensus 311 se~fg~~~~g~~~g~~~~~~~lgs~l~~~~l~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~g~~c~~~~f~i~ 390 (424)
+.+|+.+++|+..++.+...++|+++ |+.++..++...+.. +..+||+.|++.
T Consensus 160 g~wy~~~e~g~r~~~~~a~~~~g~i~-ggliA~g~~~~~~~~--------------------------~~~gW~~~FiI~ 212 (495)
T KOG2533|consen 160 GNWYGKSERGLRMGIWYASASLGNIF-GGLIAYGVFKLNGSG--------------------------GLAGWRWLFIIE 212 (495)
T ss_pred HhhcChhhhhhhHHHHHHhcchhhHH-HHHHHHHhhhhcCCC--------------------------CcCCceeehhHH
Confidence 99999999999999999999999996 999998877654411 122499999999
Q ss_pred HHHHHHHHHHHHHHh
Q 014462 391 AGLCIIAMVMSLIVV 405 (424)
Q Consensus 391 a~~~~~~~~l~~~l~ 405 (424)
++++++..++.++..
T Consensus 213 G~i~~~~gi~~f~~l 227 (495)
T KOG2533|consen 213 GVITLVLGIVVFFFL 227 (495)
T ss_pred HHHHHHHHheEEEEe
Confidence 999988776665443
No 195
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=98.64 E-value=3e-06 Score=87.02 Aligned_cols=155 Identities=15% Similarity=0.130 Sum_probs=105.7
Q ss_pred HhhhhHHHHHHHHHHHHhhhhHHHHHhcHHHHHHH-cCCCchhH-HHHH-HHHHhhhhhhhhhhhhhhhhhcccCchhHH
Q 014462 189 QALMKADFLLLFFSLVLASGSGLTVIDNLGQICQS-LGYADTSI-YVSM-ISIWNFLGRVGGGYFSEAIVRKFAYPRPVA 265 (424)
Q Consensus 189 ~~l~~~~fwll~~~~~~~~~~~~~~~~~l~~i~~~-~g~s~~~~-~~sl-~si~~~~gr~~~G~lsd~~g~k~~~~r~~~ 265 (424)
..++|+.+..+.+..++..........-+.++.+. +|.++... .... ......++.+++..+.+|+|+|+.+
T Consensus 231 ~~~~Nrp~~~~l~~~l~~~~~~~i~~s~~~yy~~y~lg~~~l~~~~~~~~~~~~~l~~~~~~p~L~~~~gkk~~~----- 305 (467)
T COG2211 231 LIFKNRPLLLLLLMNLLLFIAFNIRGSIMVYYVTYVLGDPELFAYLLLLASGAGLLIGLILWPRLVKKFGKKKLF----- 305 (467)
T ss_pred HHHccchHHHHHHHHHHHHHHHHHHhhhhheeEEEEcCChHHHHHHHHHHHHHHHHHHHHhHHHHHHHhchHHHH-----
Confidence 46777777766665544433322222223333333 45554433 3333 4444445589999999999998765
Q ss_pred HHHHHHHHHHHHHHHHh---chhHHHHHHHHHHHHHhhhhHhHHHHHHHHhh-------CcchhhHHHHHHHHHHHHHHH
Q 014462 266 MAVAQVVMAFALLYYAI---GWPGEIYVTTVLVGLSYGAHWAIVPAAASELF-------GLKSFGALYNFLTLASPAGSL 335 (424)
Q Consensus 266 l~~~~~~~~~~~ll~~~---~~~~~l~~~~~l~G~~~G~~~~~~~~~~se~f-------g~~~~g~~~g~~~~~~~lgs~ 335 (424)
.++.++.+++.+++.+ .+...+++..++.+++.+..+++.+++++|.. |.|.-|..|+++....-+|..
T Consensus 306 -~~~~~~~~i~~~~~~f~~~~~~~l~~~~~~i~~~g~~~~~~l~wam~~d~vDyge~~TG~R~eGi~~s~~tF~~K~g~a 384 (467)
T COG2211 306 -LIGLLLLAVGYLLLYFTPAGSVVLIVVALIIAGVGTGIANPLPWAMVADTVDYGEWKTGVRREGIVYSGMTFFRKLGLA 384 (467)
T ss_pred -HHHHHHHHHHHHHHHhhcCcchHHHHHHHHHHHHHhhccccccHHHhcchhhHHHHHhCCCchhhHHHHHHHHHHHHHH
Confidence 5556666666555432 23456667778889999999999999988765 556679999999999999999
Q ss_pred HHHHHHHHHHHhhhh
Q 014462 336 IFSGVIASGIYDYYA 350 (424)
Q Consensus 336 l~~~~l~g~l~d~~~ 350 (424)
+ +..+.|++.+..|
T Consensus 385 l-a~~~~g~~L~~~G 398 (467)
T COG2211 385 L-AGFIPGWILGAIG 398 (467)
T ss_pred H-HHHHHHHHHHHcC
Confidence 7 8999999888776
No 196
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=98.63 E-value=4.6e-06 Score=87.79 Aligned_cols=181 Identities=18% Similarity=0.230 Sum_probs=112.1
Q ss_pred hHHHHHHHHHHHHhhhhHHHHHhcHHHHHHHcCCCch-hHHHHHHHHHhhhhhhhhhhhhhhhhhcccCchhHHHHHHHH
Q 014462 193 KADFLLLFFSLVLASGSGLTVIDNLGQICQSLGYADT-SIYVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQV 271 (424)
Q Consensus 193 ~~~fwll~~~~~~~~~~~~~~~~~l~~i~~~~g~s~~-~~~~sl~si~~~~gr~~~G~lsd~~g~k~~~~r~~~l~~~~~ 271 (424)
++.++.+.+..|-.......+.+..+++.+..|.+.. .....+.++.++++..++.++.||+|||+.+ ..+..
T Consensus 294 ~~~~i~~~l~~fqq~tG~~~~~~Y~~~if~~~g~~~~~~~~~~~~~~v~~~~t~~~~~lvd~~gRr~ll------l~s~~ 367 (513)
T KOG0254|consen 294 KRLIIGLLLQLFQQLTGINYVFYYSTTIFKSAGLKSDTFLASIILGVVNFLGTLVATYLVDRFGRRKLL------LFGAA 367 (513)
T ss_pred HHHHHHHHHHHHHHHhCCceEEeehHHHHHhcCCCCchHHHHHHHHHHHHHHHHHHHHHHHHhccHHHH------HHhHH
Confidence 3344444444444444445566788999999888755 4566777888888888889999999998644 55666
Q ss_pred HHHHHHHHHHhc-----h--------hHHHHHHHHHHHHHhhhhH-hHHHHHHHHhhCcchhhHHHHHHHHHHHHHHHHH
Q 014462 272 VMAFALLYYAIG-----W--------PGEIYVTTVLVGLSYGAHW-AIVPAAASELFGLKSFGALYNFLTLASPAGSLIF 337 (424)
Q Consensus 272 ~~~~~~ll~~~~-----~--------~~~l~~~~~l~G~~~G~~~-~~~~~~~se~fg~~~~g~~~g~~~~~~~lgs~l~ 337 (424)
.|.++.++++.. . .+...+...+.-.++...+ ++.+.+.+|+||.+.|+++.++....+.+.+++.
T Consensus 368 ~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~f~~g~g~v~w~~~sEifp~~~r~~~~s~~~~~n~~~~~~v 447 (513)
T KOG0254|consen 368 GMSICLVILAVVGVFALYYPNSSKGAGWLAIVFLCLFIFSFAIGWGPVPWVIVSEIFPLRLRSKGASLAVAVNWLWNFLI 447 (513)
T ss_pred HHHHHHHHHHHHHHHhccCCCcccchhHHHHHHHHHHHHHHhcccccchhhhhhccCcHhHHhhhHHHHHHHHHHHHHHH
Confidence 666666554311 0 1111122222222333333 4455688999999999999999888888777642
Q ss_pred HHHHHHHHHhhhhhhhhhhhhhccCCCCCcccCCCCCCcccCCcchHHHHHHHHHHHHHHHH-HHHHHhhhhhHHH
Q 014462 338 SGVIASGIYDYYAEKQAGLLWKYNGNMLPVSFRDQETPTCLGSICYSITCGIMAGLCIIAMV-MSLIVVHRTKSVY 412 (424)
Q Consensus 338 ~~~l~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~g~~c~~~~f~i~a~~~~~~~~-l~~~l~~~~~~~~ 412 (424)
...+....... .....|...++++.++.+ ...+...+||...
T Consensus 448 -----~~~~~~~~~~~----------------------------~~~~~f~~f~~~~~~~~~~fv~~~~pETkg~s 490 (513)
T KOG0254|consen 448 -----SFFFPFITEAL----------------------------GIGGTFGYFGGICLLSLIIFVFFFVPETKGLT 490 (513)
T ss_pred -----HHHHHHHHHhc----------------------------cccchHHHHHHHHHHHHHHHheEEcccCCCCc
Confidence 22221111000 035667777777777777 5666677776644
No 197
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=98.52 E-value=6.6e-07 Score=90.33 Aligned_cols=176 Identities=15% Similarity=0.078 Sum_probs=117.1
Q ss_pred HHHHHhhhhHHHHHhcHHHHHHHcCCCchhH----------HHHHHHHHhhh-hhhhhhhhhhhhhhcccCchhHHHHHH
Q 014462 201 FSLVLASGSGLTVIDNLGQICQSLGYADTSI----------YVSMISIWNFL-GRVGGGYFSEAIVRKFAYPRPVAMAVA 269 (424)
Q Consensus 201 ~~~~~~~~~~~~~~~~l~~i~~~~g~s~~~~----------~~sl~si~~~~-gr~~~G~lsd~~g~k~~~~r~~~l~~~ 269 (424)
..+|..-.+.+...-+...|.++.|+.+... .-.+....+.+ |-.++.+++|++|||+.. ..+
T Consensus 311 ~~WFllDiafy~~nL~~s~I~~~ig~~~~~~~~~~~~~vA~~~~iia~~~~vPGyw~tv~~id~iGRk~iq------~~G 384 (538)
T KOG0252|consen 311 GTWFLLDIAFYGQNLFQSVIFSAIGVIPSANTYHELFKVAEGNLIIAVCSTVPGYWFTVYFIDIIGRKYIQ------LMG 384 (538)
T ss_pred HHHHhhhhhhhccccHHHHHHHhhccCCCcchHHHHHHHHHHHHHHHHHccCCceeEEEEEeehhhhHHHH------Hhh
Confidence 3444444555555557788999888754321 22333344444 888899999999998644 666
Q ss_pred HHHHHHHHHHHHhchh-----HHHHHHHHHHH-HHhhhhHhHHHHHHHHhhCcchhhHHHHHHHHHHHHHHHHHHHHHHH
Q 014462 270 QVVMAFALLYYAIGWP-----GEIYVTTVLVG-LSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIAS 343 (424)
Q Consensus 270 ~~~~~~~~ll~~~~~~-----~~l~~~~~l~G-~~~G~~~~~~~~~~se~fg~~~~g~~~g~~~~~~~lgs~l~~~~l~g 343 (424)
..++.+..+.++.... ..+.+...+.. +++-+-.+....+.+|.||++.||+.+|+....+-+|+++ +....+
T Consensus 385 F~~~~i~~~~~~~~y~~~~~~~Gf~v~y~l~~ff~NFGPn~ttfivpaE~FParvR~t~hGIsAA~GK~GAiv-g~~~F~ 463 (538)
T KOG0252|consen 385 FFIMTIFFFVIAGPYNQLENTIGFVVLYSLTFFFGNFGPNATTFIVPAEIFPARVRSTCHGISAASGKAGAIV-GAFGFL 463 (538)
T ss_pred HHHHHHHHHHHcCCcccccccCceeehHHHHHHHHhcCCCceeEEeehhhchHHHhhhhhhHHHHhccchHHH-HHHHhh
Confidence 6677666665553221 11222222332 3444445566778899999999999999999999999998 787777
Q ss_pred HHHhhhhhhhhhhhhhccCCCCCcccCCCCCCcccCCcchHHHHHHHHHHHHHHHHHHHHHhhhhhHH
Q 014462 344 GIYDYYAEKQAGLLWKYNGNMLPVSFRDQETPTCLGSICYSITCGIMAGLCIIAMVMSLIVVHRTKSV 411 (424)
Q Consensus 344 ~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~g~~c~~~~f~i~a~~~~~~~~l~~~l~~~~~~~ 411 (424)
.+.|+.- .. ...++.+|++++++++++.+..+++. ++++.
T Consensus 464 ~~t~~~y--p~-------------------------~~g~~~v~~i~~~~~~~gi~~T~l~p-Etk~~ 503 (538)
T KOG0252|consen 464 YLTDHNY--PP-------------------------NIGVRNVFIILAGCMLLGILFTLLIP-ETKGK 503 (538)
T ss_pred HhhhccC--Cc-------------------------cccchHHHHHHHHHHHHhHheeEEee-ccccc
Confidence 7666321 00 00289999999999999998888776 55543
No 198
>PRK09669 putative symporter YagG; Provisional
Probab=98.48 E-value=5.6e-06 Score=85.30 Aligned_cols=164 Identities=15% Similarity=0.101 Sum_probs=106.2
Q ss_pred hcHHHHH-HHcCCCchhH--HHHHHHHHhhhhhhhhhhhhhhhhhcccCchhHHHHHHHHHHHHHHHH-HHhch------
Q 014462 215 DNLGQIC-QSLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVMAFALLY-YAIGW------ 284 (424)
Q Consensus 215 ~~l~~i~-~~~g~s~~~~--~~sl~si~~~~gr~~~G~lsd~~g~k~~~~r~~~l~~~~~~~~~~~ll-~~~~~------ 284 (424)
..++.++ +.+|.+...+ +.++.-++.++.-|+.|+++||...|..-.||++ ..+.+..+++..+ +....
T Consensus 30 ~~l~~~~t~~~gls~~~~g~i~~i~~i~dai~dp~~G~lsD~~~~r~Grrrp~i-l~~~~~~~i~~~l~f~~p~~~~~~~ 108 (444)
T PRK09669 30 LFLAYFYTDVFGLSAAIMGTMFLVVRVLDAVTDPLMGALVDRTRTRHGQFRPYL-LWFAIPFGVVCLLTFYTPDFGATGK 108 (444)
T ss_pred HHHHHHHHHhcCCCHHHHHHHHHHHHHHHHcccceeeEeeecCCCCCCCcchhH-HHHHHHHHHHHHHHHhCCCCCcchH
Confidence 3455555 4589998755 8888899999999999999999655433333433 3344444444333 22211
Q ss_pred hHHHHHHHHHHHHHhhhhHhHHHHHHHHhh-CcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhccCC
Q 014462 285 PGEIYVTTVLVGLSYGAHWAIVPAAASELF-GLKSFGALYNFLTLASPAGSLIFSGVIASGIYDYYAEKQAGLLWKYNGN 363 (424)
Q Consensus 285 ~~~l~~~~~l~G~~~G~~~~~~~~~~se~f-g~~~~g~~~g~~~~~~~lgs~l~~~~l~g~l~d~~~~~~~~~~~~~~~~ 363 (424)
...+++..++.+.++.....+..+..+|+. ..++|++..++-.....+|+.+ ++.+...+....+...
T Consensus 109 ~~~~~~~~~l~~~~~t~~~ip~~al~~~~t~~~~eR~~l~~~r~~~~~~G~~i-~~~~~~pl~~~~~~~~---------- 177 (444)
T PRK09669 109 IIYACVTYILLSLVYTAINVPYCAMPGAITNDPRERHSLQSWRFALSFIGGLI-VSVIALPLVDILGKGD---------- 177 (444)
T ss_pred HHHHHHHHHHHHHHHHhhcchHHHhHHHhcCCHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHhCCCc----------
Confidence 234455566677777777778889999988 4577898888888888887776 5555444443332100
Q ss_pred CCCcccCCCCCCcccCCcchHHHHHHHHHHHHHHHHHHHHHh
Q 014462 364 MLPVSFRDQETPTCLGSICYSITCGIMAGLCIIAMVMSLIVV 405 (424)
Q Consensus 364 ~~~~~~~~~~~~~c~g~~c~~~~f~i~a~~~~~~~~l~~~l~ 405 (424)
...+|+.++.+.++++++..+++++..
T Consensus 178 ---------------~~~g~~~~~~i~~ii~~v~~~~~~~~~ 204 (444)
T PRK09669 178 ---------------EQKGYFYAMMVMGLLGVVLFFCCFFMT 204 (444)
T ss_pred ---------------hhhhHHHHHHHHHHHHHHHHHHHhCCe
Confidence 011389899988888877766655443
No 199
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=98.48 E-value=2.3e-05 Score=81.81 Aligned_cols=145 Identities=14% Similarity=0.123 Sum_probs=107.4
Q ss_pred hHHHHHHHHHhhhhhhhhhhhhhhhhhcccCchh-HHHHHHHHHHHHHHHHHH----------hchhHHHHHHHHHHHHH
Q 014462 230 SIYVSMISIWNFLGRVGGGYFSEAIVRKFAYPRP-VAMAVAQVVMAFALLYYA----------IGWPGEIYVTTVLVGLS 298 (424)
Q Consensus 230 ~~~~sl~si~~~~gr~~~G~lsd~~g~k~~~~r~-~~l~~~~~~~~~~~ll~~----------~~~~~~l~~~~~l~G~~ 298 (424)
..+.++.+++-.+..+...++..++.||..-+++ .-+.++.++.++++..+. ..+.+++.+..++.++|
T Consensus 315 ~~~~~~n~~~iil~~p~~~~~~~~l~~~~~~~~~~~k~~~G~~l~~~~~~~~~~~~~~~~~~~~~s~~~~i~~~~~~~~g 394 (475)
T TIGR00924 315 IWFQSLNPFWVVVGSPVLAMIWTRLGRKGKDPTTPLKFTLGMLFCGASFLTFAASIWFADAGGLTSPWFMVLIYLFQTLG 394 (475)
T ss_pred HHHHhhhHHHHHHHHHHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCHHHHHHHHHHHHHH
Confidence 3477788888888777766665666665222222 223566777766665543 23567788899999999
Q ss_pred hhhhHhHHHHHHHHhhCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhccCCCCCcccCCCCCCccc
Q 014462 299 YGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIASGIYDYYAEKQAGLLWKYNGNMLPVSFRDQETPTCL 378 (424)
Q Consensus 299 ~G~~~~~~~~~~se~fg~~~~g~~~g~~~~~~~lgs~l~~~~l~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~ 378 (424)
.....+...+.+++..|.+.+|...|+..+...+|+.+ ++.+.+...+..+
T Consensus 395 e~~~~p~~~~~~~~~aP~~~~g~~~g~~~l~~~~g~~l-~~~~~~~~~~~~~---------------------------- 445 (475)
T TIGR00924 395 ELMISPLGLSWWTKIAPQRLMGQMLGMWFLAQAMGSLL-GGYLATFGAVPQG---------------------------- 445 (475)
T ss_pred HHHHhHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHhcccc----------------------------
Confidence 99999999999999999999999999999999999997 8888877665444
Q ss_pred CCcchHHHHHHHHHHHHHHHHHHHHHhhh
Q 014462 379 GSICYSITCGIMAGLCIIAMVMSLIVVHR 407 (424)
Q Consensus 379 g~~c~~~~f~i~a~~~~~~~~l~~~l~~~ 407 (424)
|...|...+.++++..++.+++.++
T Consensus 446 ----~~~~~~~~~~~~~~~~~~~~~~~~~ 470 (475)
T TIGR00924 446 ----VTGVFGKIGLVTLLVGVVMALMVPW 470 (475)
T ss_pred ----hhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 6777887777777766666554433
No 200
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=98.46 E-value=6.9e-06 Score=80.96 Aligned_cols=150 Identities=17% Similarity=0.184 Sum_probs=122.2
Q ss_pred hcHHHHHHHcCCCchhH--HHHHHHHHhhhhhhhhhhhhhhhhhcccCchhHHHHHHHHHHHHHHHHHHhchhHHHHHHH
Q 014462 215 DNLGQICQSLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVMAFALLYYAIGWPGEIYVTT 292 (424)
Q Consensus 215 ~~l~~i~~~~g~s~~~~--~~sl~si~~~~gr~~~G~lsd~~g~k~~~~r~~~l~~~~~~~~~~~ll~~~~~~~~l~~~~ 292 (424)
..++++-+++|.|.+.+ ++++.-++-.+..+...++..|+|.+|.+ ..++++.+++.++=...+...++.+.
T Consensus 33 PLL~~Ir~~~gls~s~aGlLTtLPll~fg~~ap~a~~Lar~~g~er~l------~~~Llli~~G~~iR~~~~~~~L~~gt 106 (395)
T COG2807 33 PLLDEIRQDLGLSFSVAGLLTTLPLLAFGLFAPAAPRLARRFGEERSL------FLALLLIAAGILIRSLGGLPLLFLGT 106 (395)
T ss_pred hhHHHHHHHhcccHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhHHHH------HHHHHHHHHHHHHHhcccHHHHHHHH
Confidence 35677788899987765 88898999999999999999999987755 67777777777664444567889999
Q ss_pred HHHHHHhhhhHhHHHHHHHHhhCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhccCCCCCcccCCC
Q 014462 293 VLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIASGIYDYYAEKQAGLLWKYNGNMLPVSFRDQ 372 (424)
Q Consensus 293 ~l~G~~~G~~~~~~~~~~se~fg~~~~g~~~g~~~~~~~lgs~l~~~~l~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ 372 (424)
.+.|.|.+..+.+.|..+-+.|| |+.+...|++.++..+|+.+ ++.+.--+.++.+
T Consensus 107 ~l~G~gIav~nVLLPslIK~~Fp-k~~~~mtglYs~sl~~~aaL-aa~lavpla~~~~---------------------- 162 (395)
T COG2807 107 LLAGAGIAVINVLLPSLIKRDFP-KRVGLMTGLYSTSLGAGAAL-AAALAVPLAQHSG---------------------- 162 (395)
T ss_pred HHHHhhHHHHHHhhhHHHHhhcc-cchhhHHhHHHHHHHHHHHH-HhhhhhHHHHhhc----------------------
Confidence 99999999999999999999995 66799999999999998886 7766666655542
Q ss_pred CCCcccCCcchHHHHHHHHHHHHHHHHHHHH
Q 014462 373 ETPTCLGSICYSITCGIMAGLCIIAMVMSLI 403 (424)
Q Consensus 373 ~~~~c~g~~c~~~~f~i~a~~~~~~~~l~~~ 403 (424)
.|+.++.+++..++++++.-+-
T Consensus 163 ---------gW~~aL~~WAl~allAl~~WlP 184 (395)
T COG2807 163 ---------GWRGALGFWALLALLALLIWLP 184 (395)
T ss_pred ---------cHHHHHHHHHHHHHHHHHHHhh
Confidence 2999999999999887655433
No 201
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=98.43 E-value=3.4e-06 Score=90.95 Aligned_cols=160 Identities=19% Similarity=0.270 Sum_probs=116.2
Q ss_pred HHhcHHHHHH-HcCCCchhH--HHHHHHHHhhhhhhhhhhhhhhhh-hcccCchhHHHHHHHHHHHHHHHHHHhch----
Q 014462 213 VIDNLGQICQ-SLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIV-RKFAYPRPVAMAVAQVVMAFALLYYAIGW---- 284 (424)
Q Consensus 213 ~~~~l~~i~~-~~g~s~~~~--~~sl~si~~~~gr~~~G~lsd~~g-~k~~~~r~~~l~~~~~~~~~~~ll~~~~~---- 284 (424)
+..++..+++ .+|++++.+ +...+.....+..+++|+++|++- +++.+ .++.++..+++.+++...
T Consensus 6 m~aiLvlYl~~~lg~~~~~A~~i~~~f~~l~yl~pilGg~iAD~~lG~~~tI------l~~~ii~~lG~~llai~a~~~~ 79 (654)
T TIGR00926 6 MRTILVLYFLNFLGFSESTSTVLFHTFTYLCYLTPLIGAIIADGWLGKFKTI------LYLSIVYVVGHALLSFGAIPSS 79 (654)
T ss_pred cHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHH------HHHHHHHHHHHHHHHhccCccc
Confidence 3344444443 478876644 666777777788899999999884 44333 556666777776654321
Q ss_pred -----hHHHHHHHHHHHHHhhhhHhHHHHHHHHhhCcc---hhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhh
Q 014462 285 -----PGEIYVTTVLVGLSYGAHWAIVPAAASELFGLK---SFGALYNFLTLASPAGSLIFSGVIASGIYDYYAEKQAGL 356 (424)
Q Consensus 285 -----~~~l~~~~~l~G~~~G~~~~~~~~~~se~fg~~---~~g~~~g~~~~~~~lgs~l~~~~l~g~l~d~~~~~~~~~ 356 (424)
....+++.+++++|.|+.-+...+...+.|..+ .+-..+++...+.++|+++ ++.+.+++.+..+
T Consensus 80 ~~~~~~~~~l~gLaLia~G~GgiKp~vsaf~gdqf~~~~~~~~~s~F~~fY~~iNiGSli-s~~i~~~l~~~~~------ 152 (654)
T TIGR00926 80 GHPLHDLLDLLGLALIALGTGGIKPCVSAFGGDQFEERQLSLRSRFFSFFYFAINAGSLI-STIITPILRGDVG------ 152 (654)
T ss_pred ccchHHHHHHHHHHHHHhhccccccCchhhhHhhcCccchhHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHhhc------
Confidence 123567888888999999999999999999754 4788999999999999997 8888887754432
Q ss_pred hhhccCCCCCcccCCCCCCcccC-CcchHHHHHHHHHHHHHHHHHHHHHh
Q 014462 357 LWKYNGNMLPVSFRDQETPTCLG-SICYSITCGIMAGLCIIAMVMSLIVV 405 (424)
Q Consensus 357 ~~~~~~~~~~~~~~~~~~~~c~g-~~c~~~~f~i~a~~~~~~~~l~~~l~ 405 (424)
|+| ..||..+|.+.+++.++++++.....
T Consensus 153 --------------------~fg~~~~~~~aF~i~~i~m~ia~lvf~~g~ 182 (654)
T TIGR00926 153 --------------------CFGCQDCYPLAFGVPAILMILALIVFMAGS 182 (654)
T ss_pred --------------------ccccCcchHHHHHHHHHHHHHHHHHHHHhc
Confidence 444 34799999999999988877665433
No 202
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=98.41 E-value=1.6e-05 Score=79.38 Aligned_cols=159 Identities=13% Similarity=0.060 Sum_probs=124.9
Q ss_pred cHHHHHHHcCCCchhH--HHHHHHHHhhhhhhhhhhhhhhhhhcccCchhHHHHHHHHHHHHHHHHHH----hchhHHHH
Q 014462 216 NLGQICQSLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVMAFALLYYA----IGWPGEIY 289 (424)
Q Consensus 216 ~l~~i~~~~g~s~~~~--~~sl~si~~~~gr~~~G~lsd~~g~k~~~~r~~~l~~~~~~~~~~~ll~~----~~~~~~l~ 289 (424)
..|++.+.++.+..++ +-..+..+.+++.+..|++.+|+|+|+.+ ..++.++++++.++. ..+...+.
T Consensus 35 Lip~l~~~f~ls~~~a~liqfaff~gYf~~~lpa~~~~kk~gyk~gi------~lgL~l~avg~~lF~pAa~~~~y~~FL 108 (422)
T COG0738 35 LIPHLKEVFDLTYFEASLIQFAFFGGYFIMSLPAGLLIKKLGYKAGI------VLGLLLYAVGAALFWPAASSKSYGFFL 108 (422)
T ss_pred hHHHHHHHhCccHHHHHHHHHHHHHHHHHHhccHHHHHHHhhhHHHH------HHHHHHHHHHHHHHhhhhhhhhHHHHH
Confidence 4667777788886654 55566677788999999999999999877 889999999998874 23455677
Q ss_pred HHHHHHHHHhhhhHhHHHHHHHHhhCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhh-----------hhhhhhhhh
Q 014462 290 VTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIASGIYDYY-----------AEKQAGLLW 358 (424)
Q Consensus 290 ~~~~l~G~~~G~~~~~~~~~~se~fg~~~~g~~~g~~~~~~~lgs~l~~~~l~g~l~d~~-----------~~~~~~~~~ 358 (424)
++.++.|.|.|..-+...++++.+.+.++-....|+....+++|+.+ +|.+++.+.++. +.+..
T Consensus 109 ~~lFila~Gi~~LetaaNp~v~~lg~~~~a~~rlnl~q~fn~lGa~~-gp~~g~~lils~~~~~~~~~~~~~~~~~---- 183 (422)
T COG0738 109 VALFILASGIGLLETAANPYVTLLGKPESAAFRLNLAQAFNGLGAIL-GPLLGSSLILSGVALTMSAAQILAIKGA---- 183 (422)
T ss_pred HHHHHHHhhhHHHHhccchHHHHhCCchhHHHHHHHHHHhhhhHHHH-HHHHHHHHHHhhhhhccCHHHHHHHHHH----
Confidence 78899999999999999999999999988899999999999999998 899999887741 11100
Q ss_pred hccCCCCCcccCCCCCCcccCCcchHHHHHHHHHHHHHHHHHHHHHh
Q 014462 359 KYNGNMLPVSFRDQETPTCLGSICYSITCGIMAGLCIIAMVMSLIVV 405 (424)
Q Consensus 359 ~~~~~~~~~~~~~~~~~~c~g~~c~~~~f~i~a~~~~~~~~l~~~l~ 405 (424)
-...++..+..++.++++-.+.....+
T Consensus 184 --------------------~~~~v~~pYl~~~~~lvll~v~~~~~k 210 (422)
T COG0738 184 --------------------DASSVQFPYLILAGLLVLLAVLILLSK 210 (422)
T ss_pred --------------------HHHhhhhHHHHHHHHHHHHHHHHHhcc
Confidence 001288899999988777665555444
No 203
>PF13347 MFS_2: MFS/sugar transport protein
Probab=98.41 E-value=1.8e-06 Score=88.52 Aligned_cols=162 Identities=16% Similarity=0.211 Sum_probs=118.7
Q ss_pred hcHHHHHHH-cCCCchhH--HHHHHHHHhhhhhhhhhhhhh----hhhhcccCchhHHHHHHHHHHHHHHHHHHhc-h--
Q 014462 215 DNLGQICQS-LGYADTSI--YVSMISIWNFLGRVGGGYFSE----AIVRKFAYPRPVAMAVAQVVMAFALLYYAIG-W-- 284 (424)
Q Consensus 215 ~~l~~i~~~-~g~s~~~~--~~sl~si~~~~gr~~~G~lsd----~~g~k~~~~r~~~l~~~~~~~~~~~ll~~~~-~-- 284 (424)
.++..++.+ .|.++... +.....+++++--|+.|+++| |+||||.+ +.++.++.+++..++... +
T Consensus 22 ~~~~~f~~~~~gl~~~~~g~i~~~~~i~dai~dp~~G~~sDr~~tr~Grrrp~-----~l~g~i~~~~~~~llf~~~p~~ 96 (428)
T PF13347_consen 22 SYLLYFYTDVLGLSPALAGLILLVGRIWDAITDPLIGYLSDRTRTRWGRRRPW-----ILIGAILLALSFFLLFSPPPAG 96 (428)
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHhhhhcCCcEEEEEeeecccccccceE-----eehhhHHHHHHHHHhhccccch
Confidence 345555544 79998654 777888999999999999999 77776644 355666666666554422 1
Q ss_pred ------hHHHHHHHHHHHHHhhhhHhHHHHHHHHhhC-cchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhh
Q 014462 285 ------PGEIYVTTVLVGLSYGAHWAIVPAAASELFG-LKSFGALYNFLTLASPAGSLIFSGVIASGIYDYYAEKQAGLL 357 (424)
Q Consensus 285 ------~~~l~~~~~l~G~~~G~~~~~~~~~~se~fg-~~~~g~~~g~~~~~~~lgs~l~~~~l~g~l~d~~~~~~~~~~ 357 (424)
..++.+..++..+++.....+..+..+|+.+ .++|.+..+.-.....+|+.+ ...+.+.+.+..+..+.
T Consensus 97 ~~~~~~~~~~~~~~~l~~~~~t~~~i~~~al~~~lt~~~~~R~~l~~~~~~~~~~g~~l-~~~~~~~l~~~~g~~~~--- 172 (428)
T PF13347_consen 97 LSFTAKLVWLFVFYILFDIAYTFVQIPYNALIPELTPDPDERTRLSSWRMIFSMIGSLL-ASFLAPILVSWFGGGDT--- 172 (428)
T ss_pred hhhhhHHHHHHHHHHHHHHhhhhccCchhhcCccccccHhhhhhHHHHHHHHHHHHHHH-HHHHhhhhhhhhccCcc---
Confidence 1234566666788888888888999999997 468999999999999999976 56777777765552210
Q ss_pred hhccCCCCCcccCCCCCCcccCCcchHHHHHHHHHHHHHHHHHHHHHhhh
Q 014462 358 WKYNGNMLPVSFRDQETPTCLGSICYSITCGIMAGLCIIAMVMSLIVVHR 407 (424)
Q Consensus 358 ~~~~~~~~~~~~~~~~~~~c~g~~c~~~~f~i~a~~~~~~~~l~~~l~~~ 407 (424)
...|++...+.+++++++.++.....++
T Consensus 173 ----------------------~~~~~~~~~v~~iv~~v~~~i~~~~~ke 200 (428)
T PF13347_consen 173 ----------------------SNGYRWMALVLAIVGLVFFLITFFFVKE 200 (428)
T ss_pred ----------------------chHHHHHHHHHHHHHHHHhhhhhheeee
Confidence 0139999999999999888888777666
No 204
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=98.40 E-value=0.00013 Score=73.35 Aligned_cols=185 Identities=16% Similarity=0.122 Sum_probs=124.9
Q ss_pred hhhhHHHHHHHHHHHHhhhhHHHHHhcHHHHH-HHcCCCchhH--HHHHHHHHhhhhhhhhhhhhhhhhhcccCchhHHH
Q 014462 190 ALMKADFLLLFFSLVLASGSGLTVIDNLGQIC-QSLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAM 266 (424)
Q Consensus 190 ~l~~~~fwll~~~~~~~~~~~~~~~~~l~~i~-~~~g~s~~~~--~~sl~si~~~~gr~~~G~lsd~~g~k~~~~r~~~l 266 (424)
...+++...++...+.+..+...-..-+-+|. +-+|++..++ +..+.+.+..+|-.+.|++..+-..|+.. .
T Consensus 204 ~~~~~~a~~f~~fl~l~t~a~~~QD~iLEPygg~Vfgmsv~eTT~Lta~~~~G~L~G~~~~g~~l~~~~~~~~~----a- 278 (403)
T PF03209_consen 204 VWASPQARRFFVFLFLGTLAFFMQDVILEPYGGEVFGMSVGETTRLTAFWGGGTLLGMLLAGFLLSRRLGKKRT----A- 278 (403)
T ss_pred HHhCCChhHHHHHHHHHHHHHHhhHHHcCCchhHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCchHH----H-
Confidence 44455545554444444433333223344444 4589986543 99999999999999999887743332222 1
Q ss_pred HHHHHHHHHHHHH--HH--hchhHHHHHHHHHHHHHhhhhHhHHHHHHHHhhCcchhhHHHHHHHHHHHHHHHHHHHHHH
Q 014462 267 AVAQVVMAFALLY--YA--IGWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIA 342 (424)
Q Consensus 267 ~~~~~~~~~~~ll--~~--~~~~~~l~~~~~l~G~~~G~~~~~~~~~~se~fg~~~~g~~~g~~~~~~~lgs~l~~~~l~ 342 (424)
..++...++++.+ ++ ..+.+.+....+++|++.|....-.-+.+.++-..++-|+..|....+..++..+ +..++
T Consensus 279 ~~G~~~~~~~f~lii~a~~~~~~~~~~~~~~l~G~g~G~f~vgals~mM~lt~~~~aG~~mG~WGaaQA~A~Gl-g~~~G 357 (403)
T PF03209_consen 279 ALGCLLGALAFALIILAGPLGSPWLFRPGVFLLGLGNGLFTVGALSLMMDLTSAGRAGLFMGAWGAAQAIARGL-GTFLG 357 (403)
T ss_pred HHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHhhhHHHHHHHHHHHhCCCCcchhHHHHHHHHHHHHHHHH-HHHHH
Confidence 2334333333333 22 3456788889999999999999999999999999999999999999999999987 89999
Q ss_pred HHHHhhhhhhhhhhhhhccCCCCCcccCCCCCCcccCCcchHHHHHHHHHHHHHHHHHHH
Q 014462 343 SGIYDYYAEKQAGLLWKYNGNMLPVSFRDQETPTCLGSICYSITCGIMAGLCIIAMVMSL 402 (424)
Q Consensus 343 g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~g~~c~~~~f~i~a~~~~~~~~l~~ 402 (424)
|.+.|-...-.+ + + ..-.|..+|.+=+.+.+++..+..
T Consensus 358 G~~~D~~~~~~~--------~------~--------~~~aY~~VF~lEa~ll~~a~~ll~ 395 (403)
T PF03209_consen 358 GALRDLVRALFG--------N------S--------PALAYGVVFALEAVLLLAALVLLG 395 (403)
T ss_pred HHHHHHHHHhcc--------C------C--------cchHHHHHHHHHHHHHHHHHHHHH
Confidence 999887542110 0 0 011399999998887777665543
No 205
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=98.38 E-value=1.6e-05 Score=82.71 Aligned_cols=173 Identities=18% Similarity=0.122 Sum_probs=111.6
Q ss_pred HHHHHHHHHhhhhHHHHHhcHHHHHH-HcCCCchhH--HHHHHHHHhhhhhhhhhhhhhhhhhcccCchhHHHHHHHHHH
Q 014462 197 LLLFFSLVLASGSGLTVIDNLGQICQ-SLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVM 273 (424)
Q Consensus 197 wll~~~~~~~~~~~~~~~~~l~~i~~-~~g~s~~~~--~~sl~si~~~~gr~~~G~lsd~~g~k~~~~r~~~l~~~~~~~ 273 (424)
.++...+++.... ......++.+++ ++|.+.++. ++++..+...+ .+++|.++|+++. ....|+..+.++.++.
T Consensus 29 ~~~~~~y~~qGl~-~l~~~~~~~~l~~~lg~s~~~i~~~~sl~~lpw~~-K~l~g~l~D~~~i-~G~rRr~~l~~~~~l~ 105 (468)
T TIGR00788 29 AIGLQVLFVKGIA-GLMRLPLSPMLTDDLGLDGARYQRLVGLSSLGWAL-KPFAGVMSDTFPL-FGYTKRWYLVLSGLLG 105 (468)
T ss_pred HHHHHHHHHhhHH-HHhhhhhhHHHHHhcCCCHHHHHHHHHHHHHHHHH-HHHHHHHHHhcCC-CCccchHHHHHHHHHH
Confidence 4444445544444 333445555555 589998765 77888888887 5559999999951 1122223445555444
Q ss_pred -HHHHHHHHh-ch-hHHHHHHHHHHHHHhhhhHhHHHHHHHHhhCcchhhH---HHHHHHHHHHHHHHHHHHHHHHHHHh
Q 014462 274 -AFALLYYAI-GW-PGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGA---LYNFLTLASPAGSLIFSGVIASGIYD 347 (424)
Q Consensus 274 -~~~~ll~~~-~~-~~~l~~~~~l~G~~~G~~~~~~~~~~se~fg~~~~g~---~~g~~~~~~~lgs~l~~~~l~g~l~d 347 (424)
+++...++. .+ .....+..++.+++.+.+....-+++.|..+ ++.+. ..+.......+|..+ ++.++|.+.+
T Consensus 106 ~~~~~~~l~~~~~~~~~~~~~~~l~~~~~a~~dv~~da~~~e~~~-~~~~~~~~~~s~~~~~~~~G~~v-g~~l~G~l~~ 183 (468)
T TIGR00788 106 SAILYGLLPGKVSSAKVAAAFIFLAALAKALYDVLVDSLYSERIR-ESPSAGPSLVSWMWGASATGGLI-SSLLGGPLLD 183 (468)
T ss_pred HHHHHHhcccccchHHHHHHHHHHHHHHHHHHHHhHHHHHhhhhh-cCCCcCCCeeeHHHHHHHHHHHH-HHHHHHHHHH
Confidence 233222332 22 2233346778889999999999999999997 54433 444444455678887 8999999988
Q ss_pred hhhhhhhhhhhhccCCCCCcccCCCCCCcccCCcchHHHHHHHHHHHHHHHHHHHHHhh
Q 014462 348 YYAEKQAGLLWKYNGNMLPVSFRDQETPTCLGSICYSITCGIMAGLCIIAMVMSLIVVH 406 (424)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~g~~c~~~~f~i~a~~~~~~~~l~~~l~~ 406 (424)
..+ |+..|++.+++.++..+...+++.
T Consensus 184 ~~~--------------------------------~~~~f~~~a~l~ll~~~~~~~~~E 210 (468)
T TIGR00788 184 KTL--------------------------------TRILFLITAALLLLQLFVSNLSKE 210 (468)
T ss_pred hcC--------------------------------cchHHHHHHHHHHHHHHHHHhccc
Confidence 776 899999999888887554444443
No 206
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.38 E-value=5.2e-06 Score=85.95 Aligned_cols=135 Identities=18% Similarity=0.239 Sum_probs=101.2
Q ss_pred HHHHHHHHhhhhhhhhhhhhhhhhhcccCchhHHHHHHHHHHHHHHHHH--H--hchhHHHHHHHHHHHHHhhhhHhHHH
Q 014462 232 YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVMAFALLYY--A--IGWPGEIYVTTVLVGLSYGAHWAIVP 307 (424)
Q Consensus 232 ~~sl~si~~~~gr~~~G~lsd~~g~k~~~~r~~~l~~~~~~~~~~~ll~--~--~~~~~~l~~~~~l~G~~~G~~~~~~~ 307 (424)
.++.+.+++++|...+|+++|++|||..+ .+..++..++.+++ + ......+.++.++.|+..|...+..+
T Consensus 65 ~vs~f~iG~~~Gs~~~~~la~~~GRK~~l------~~~~~l~~~~~~~~~~s~~~~~~e~li~GR~i~Gl~~gl~~~~~p 138 (485)
T KOG0569|consen 65 IVSIFFIGGMIGSFSSGLLADRFGRKNAL------LLSNLLAVLAALLMGLSKSAPSFEMLILGRLIVGLACGLSTGLVP 138 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhcchHHH------HHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHhHHHHHHHH
Confidence 89999999999999999999999999644 33333333332222 2 45567889999999999999999999
Q ss_pred HHHHHhhCcchhhHHHHHHHHHHHHHHHHHHHHHHH-HHHhhhhhhhhhhhhhccCCCCCcccCCCCCCcccCCcchHHH
Q 014462 308 AAASELFGLKSFGALYNFLTLASPAGSLIFSGVIAS-GIYDYYAEKQAGLLWKYNGNMLPVSFRDQETPTCLGSICYSIT 386 (424)
Q Consensus 308 ~~~se~fg~~~~g~~~g~~~~~~~lgs~l~~~~l~g-~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~g~~c~~~~ 386 (424)
.++.|.-|.+.||..-.+..++..+|..+ +..++. .+...+. -|...
T Consensus 139 myl~E~sP~~~RG~~g~~~~~~~~~g~ll-~~~~~l~~ilGt~~-------------------------------~W~~l 186 (485)
T KOG0569|consen 139 MYLTEISPKNLRGALGTLLQIGVVIGILL-GQVLGLPSLLGTED-------------------------------LWPYL 186 (485)
T ss_pred HHHhhcChhhhccHHHHHHHHHHHHHHHH-HHHHccHHhcCCCc-------------------------------chHHH
Confidence 99999999999999999999998888876 544333 3332221 28888
Q ss_pred HHHHHHHHHHHHHHHHHH
Q 014462 387 CGIMAGLCIIAMVMSLIV 404 (424)
Q Consensus 387 f~i~a~~~~~~~~l~~~l 404 (424)
+..-.+.+++..++..++
T Consensus 187 ~~~~~i~~~~~l~~l~~~ 204 (485)
T KOG0569|consen 187 LAFPLIPALLQLALLPFL 204 (485)
T ss_pred HHHHHHHHHHHHHHHhcC
Confidence 887777777665555443
No 207
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=98.34 E-value=7.2e-06 Score=83.29 Aligned_cols=153 Identities=15% Similarity=0.178 Sum_probs=91.6
Q ss_pred hhhHHHHHHHHHHHHhhhhHHHHHhcHHHHHHH-cCCCchhH--HHHHHHHHhhhhhhhhhhhhhhhhhcccCchhHHHH
Q 014462 191 LMKADFLLLFFSLVLASGSGLTVIDNLGQICQS-LGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMA 267 (424)
Q Consensus 191 l~~~~fwll~~~~~~~~~~~~~~~~~l~~i~~~-~g~s~~~~--~~sl~si~~~~gr~~~G~lsd~~g~k~~~~r~~~l~ 267 (424)
.+++.||.+...+++..++.-.....++..+++ .|++.+++ +.+..++...+..++.|.++||++.||.. ...
T Consensus 4 ~~~~~~~~~s~~~f~~Ff~~gi~~pF~~iWL~~~~GLs~~~iG~i~s~~~~~~l~~qp~~G~i~Dklg~kK~L----l~~ 79 (412)
T PF01306_consen 4 FKNKNYWWLSLFYFFYFFIWGIFLPFFPIWLTQVAGLSGTEIGIIFSAGSLFALLAQPVYGFISDKLGLKKHL----LWF 79 (412)
T ss_dssp CHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHTHHHHHHHHHHCTTCSHH----HHH
T ss_pred ccCchHHHHHHHHHHHHHHHHHHHHHHHHHHccccCCCHHHHHHHHHHHHHHHHHHHHhHHHhcchhhhhHHH----HHH
Confidence 477889987777777666655555566777765 89998776 88999999999999999999999987654 112
Q ss_pred HHHHHH-HHHHHHHHhch--hHHHHHHHHH----HHHHhhhhHhHHHHHHHHhhCcchhhHHHHHHHHHHHHHHHHHHHH
Q 014462 268 VAQVVM-AFALLYYAIGW--PGEIYVTTVL----VGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGV 340 (424)
Q Consensus 268 ~~~~~~-~~~~ll~~~~~--~~~l~~~~~l----~G~~~G~~~~~~~~~~se~fg~~~~g~~~g~~~~~~~lgs~l~~~~ 340 (424)
+..++. ....+.+...+ ....+++.++ .|+++.+..++.=+++.+.- ++.+.-||=.-+.+++|-.+ +..
T Consensus 80 i~~l~~l~~pff~~v~~pll~~n~~lg~iig~i~l~~~f~~~~~~~Ea~~er~s--r~~~feYG~~R~wGSig~ai-~s~ 156 (412)
T PF01306_consen 80 IAILLLLFGPFFIYVFGPLLQSNFWLGAIIGGIYLGLVFNAGVPLSEAYAERVS--RRNGFEYGRARMWGSIGFAI-ASL 156 (412)
T ss_dssp HHHHHHTCHHHHHHTHHHHHHTT-HHHHHHTTTTTTTTTTTHHHHHHHHHHHHH--HHHSS-HHHHHHHHHHHHHH-HHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccchHHHHHHHHHH--HHhcCCcchHHHHhhHHHHH-HHH
Confidence 222222 12222211111 1123333333 34444444444433333332 44566677777788888887 788
Q ss_pred HHHHHHhhhh
Q 014462 341 IASGIYDYYA 350 (424)
Q Consensus 341 l~g~l~d~~~ 350 (424)
++|.+++...
T Consensus 157 ~~G~L~~i~p 166 (412)
T PF01306_consen 157 LAGILFNINP 166 (412)
T ss_dssp HHHHHHHHHH
T ss_pred HhheeeeeCc
Confidence 8999887543
No 208
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=98.33 E-value=5.5e-05 Score=77.33 Aligned_cols=159 Identities=11% Similarity=-0.108 Sum_probs=93.1
Q ss_pred HHHhhhhHHHHHHHHHHHHhhhhHHHHHhcHHHHHHH-cCCCchhH--HHHHHHHHhhhhhhhhhhhhhhhhhcccCchh
Q 014462 187 LPQALMKADFLLLFFSLVLASGSGLTVIDNLGQICQS-LGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRP 263 (424)
Q Consensus 187 ~~~~l~~~~fwll~~~~~~~~~~~~~~~~~l~~i~~~-~g~s~~~~--~~sl~si~~~~gr~~~G~lsd~~g~k~~~~r~ 263 (424)
+++.++++.+|...+..++.......+....|.+.++ .|++..+. .......+..++..+.+.+.++..+++..-+.
T Consensus 211 ~~~ll~~~~~~~~~l~~~~~~~~~~~~~~~~P~~l~~~~g~s~~~~gl~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~ 290 (413)
T PRK15403 211 FRNVFRNRLFLTGAATLSLSYIPMMSWVAVSPVILIDAGGMTTSQFAWTQVPVFGAVIVANAIVARFVKDPTEPRFIWRA 290 (413)
T ss_pred HHHHHcCHHHHHHHHHHHHHHHHHHHHHHhChHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchhHHHHH
Confidence 3458899999998887777766666677778888877 58887654 33445555566655555544332222211000
Q ss_pred -HHHHHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHhhhhHhHHHHHHHHhhCcchhhHHHHHHHHHHHHHHHHHHHHHH
Q 014462 264 -VAMAVAQVVMAFALLYYAIGWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIA 342 (424)
Q Consensus 264 -~~l~~~~~~~~~~~ll~~~~~~~~l~~~~~l~G~~~G~~~~~~~~~~se~fg~~~~g~~~g~~~~~~~lgs~l~~~~l~ 342 (424)
....++.+++.++... ........++..++.++|.|...+......-.-. ....|++.++.+.....+..+ ++.+.
T Consensus 291 ~~~~~ig~~l~~~~~~~-~~~~~~~~~~~~~l~~~G~~~~~p~~~~~al~~~-~~~~G~a~a~~~~~~~~~~~~-~~~~~ 367 (413)
T PRK15403 291 VPIQLVGLALLIVGNLL-WPHVWLWSVLGTSLYAFGIGLIFPTLFRFTLFSN-NLPKGTVSASLNMVILMVMAV-SVEIG 367 (413)
T ss_pred HHHHHHHHHHHHHHHHH-ccccHHHHHHHHHHHHHHHHHHhHHHHHHHhccC-CCCCcHHHHHHHHHHHHHHHH-HHHHH
Confidence 0111122222222111 1122223466777888888887766664332222 224688888888888777776 78888
Q ss_pred HHHHhh
Q 014462 343 SGIYDY 348 (424)
Q Consensus 343 g~l~d~ 348 (424)
|++++.
T Consensus 368 g~~~~~ 373 (413)
T PRK15403 368 RWLWFN 373 (413)
T ss_pred HHHHHc
Confidence 887765
No 209
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=98.30 E-value=0.00084 Score=70.57 Aligned_cols=152 Identities=15% Similarity=0.133 Sum_probs=104.9
Q ss_pred hHHHHHHHHHhhhhhhhhhhhhhhhhhcccCchhHHHHHHHHHHHHHHHHHHhc----------hhHHHHHHHHHHHHHh
Q 014462 230 SIYVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVMAFALLYYAIG----------WPGEIYVTTVLVGLSY 299 (424)
Q Consensus 230 ~~~~sl~si~~~~gr~~~G~lsd~~g~k~~~~r~~~l~~~~~~~~~~~ll~~~~----------~~~~l~~~~~l~G~~~ 299 (424)
+++.++.+++..+..++.+++..|.++|... +.-+.++.++++++++.+... +.+++....++.|++.
T Consensus 319 ~~~~s~n~i~iil~~p~~~~~~~~l~~r~~~--~~~~~~G~~l~~l~f~~l~~~~~~~~~~~~vs~~~~~~~~~l~~~ge 396 (500)
T PRK09584 319 EQYQALNPFWIMIGSPILAAIYNKMGDRLPM--PHKFAIGMVLCSGAFLVLPLGAKFANDAGIVSVNWLIASYGLQSIGE 396 (500)
T ss_pred HHHHHHhHHHHHHHHHHHHHHHHHhCcCCCc--HHHHHHHHHHHHHHHHHHHHHHHhcCCCCccCHHHHHHHHHHHHHHH
Confidence 4577788888888888888887787766433 334567777777777664321 1346788899999999
Q ss_pred hhhHhHHHHHHHHhhCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhccCCCCCcccCCCCCCcccC
Q 014462 300 GAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIASGIYDYYAEKQAGLLWKYNGNMLPVSFRDQETPTCLG 379 (424)
Q Consensus 300 G~~~~~~~~~~se~fg~~~~g~~~g~~~~~~~lgs~l~~~~l~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~g 379 (424)
+...+...+.+.+.-|++.+|..+|+..++..+|+.+ ++.+.+......... ....
T Consensus 397 ~~~~p~g~s~~~~~aP~~~rg~~~g~~~l~~a~g~~~-~g~~~~~~~~~~~~~-----------------------~~~~ 452 (500)
T PRK09584 397 LMISGLGLAMVAQLVPQRLMGFIMGSWFLTTAGAALI-AGYVANLMAVPDNVT-----------------------DPLM 452 (500)
T ss_pred HHHhHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHH-HHHHHHHhccccccc-----------------------cchh
Confidence 9999999999999999999999999988888887775 555555332111000 0000
Q ss_pred C-cchHHHHHHHHHHHHHHHHHHHHHhhh
Q 014462 380 S-ICYSITCGIMAGLCIIAMVMSLIVVHR 407 (424)
Q Consensus 380 ~-~c~~~~f~i~a~~~~~~~~l~~~l~~~ 407 (424)
. ..|...|...+.++++..++.+++.++
T Consensus 453 ~~~~~~~~f~~~~~~~~~~a~~~~~~~~~ 481 (500)
T PRK09584 453 SLEVYGRVFLQIGIATAVIAVLMLLTAPK 481 (500)
T ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0 127888988888777655555544433
No 210
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=98.29 E-value=0.00026 Score=74.53 Aligned_cols=153 Identities=11% Similarity=0.067 Sum_probs=91.2
Q ss_pred CCHHHhhhhHHHHHHHHHHHHhhhhHHHHHhcHHHHHHHcCCCchhHHHHHHHHHhhhhhhhhhhhhhhhhhcccCchhH
Q 014462 185 FTLPQALMKADFLLLFFSLVLASGSGLTVIDNLGQICQSLGYADTSIYVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPV 264 (424)
Q Consensus 185 ~t~~~~l~~~~fwll~~~~~~~~~~~~~~~~~l~~i~~~~g~s~~~~~~sl~si~~~~gr~~~G~lsd~~g~k~~~~r~~ 264 (424)
..+.++++.+++........+.........+-+......+|.+... ...+.+.....+....+...|++|||...
T Consensus 309 ~~~~~l~~~~~l~~~~~~~~~~~~~~~~~y~gl~~~~~~lg~~~~~-~~~~~~~~~~p~~~~~~~~~~~~gR~~~~---- 383 (521)
T KOG0255|consen 309 ISFLDLFRTPRLRYRTLYLLFIWFVFSLVYYGLSLNVSGLGGNIYL-NFTLSGLVELPAYFRNGLLLPEFGRRPPL---- 383 (521)
T ss_pred CchhhhhcCHHHHHHHHHHHHHHHHHhHHHHhhhhhhhhcCchHHH-HHHHHHHHHhhHHHHHHHHHHHhCcHHHH----
Confidence 4577888887543222222222111111111222233334433321 22222234445556668888999877543
Q ss_pred HHHHHHHHHHHHHHHHHhch--hH--HHHHHHHHHHHHhhhhHhHHHHHHHHhhCcchhhHHHHHHHHHHHHHHHHHHHH
Q 014462 265 AMAVAQVVMAFALLYYAIGW--PG--EIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGV 340 (424)
Q Consensus 265 ~l~~~~~~~~~~~ll~~~~~--~~--~l~~~~~l~G~~~G~~~~~~~~~~se~fg~~~~g~~~g~~~~~~~lgs~l~~~~ 340 (424)
..++.+..++++.+.... .. ...+...+..++.+..+.....+.+|++|+..|+.+.+..++...+|+++ +|.
T Consensus 384 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~pt~~r~~~~~~~~~~~~~~~i~-ap~ 460 (521)
T KOG0255|consen 384 --FLSLFLAGIGLLLFGWLPDDLGGWLHWILPLLGKFFIGSAFNLIFLYSAELIPTVVRNTAVGAISAAARLGSIL-APL 460 (521)
T ss_pred --HHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHH-HHH
Confidence 666666666666554322 22 24445555556777778888999999999999999999999999999997 787
Q ss_pred HHHHH
Q 014462 341 IASGI 345 (424)
Q Consensus 341 l~g~l 345 (424)
+.-..
T Consensus 461 ~~~~~ 465 (521)
T KOG0255|consen 461 FPLLL 465 (521)
T ss_pred HHHHH
Confidence 66543
No 211
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=98.28 E-value=4e-06 Score=87.33 Aligned_cols=157 Identities=10% Similarity=0.051 Sum_probs=104.7
Q ss_pred HHHhhhhHHHHHHHHHHHHhhhhHHHHHhcHHHH-HHHcCCCchhH--HHHHHHHHhhhhhhhhhhhhhhhhhcccCchh
Q 014462 187 LPQALMKADFLLLFFSLVLASGSGLTVIDNLGQI-CQSLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRP 263 (424)
Q Consensus 187 ~~~~l~~~~fwll~~~~~~~~~~~~~~~~~l~~i-~~~~g~s~~~~--~~sl~si~~~~gr~~~G~lsd~~g~k~~~~r~ 263 (424)
+++.++++..|......++......+..+.+-.+ .+.+|+++... +....++++.+|..+.+++.+|++.|+.
T Consensus 245 l~~~l~~~~i~~~l~fifl~~~~~~~~~~~~f~~~~~~lG~s~~~~G~~~~~~~v~~i~g~~~~~~~~~~~~~r~~---- 320 (468)
T TIGR00788 245 LRGAIQLLEIAKPLIFIFLSYANLPGASGSVFCATTQCLPGGPSFSGMSKVVGNLGSLCGVGGYDRFLKTFPYRLL---- 320 (468)
T ss_pred HHHHHhcHHHHHHHHHHHHHHhhcCCCCceeEEEEcccCCCCcchhhhHHHHHHHHHHHHHHHHHHHHhhCCHHHH----
Confidence 4556778888764443333111111111111001 13478887654 6666778888888888777666665543
Q ss_pred HHHHHHHHHHHHHHHHHH--h---------chhHHHHHHHHHHHHHhhhhHhHHHHHHHHhhCcchhhHHHHHHHHHHHH
Q 014462 264 VAMAVAQVVMAFALLYYA--I---------GWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPA 332 (424)
Q Consensus 264 ~~l~~~~~~~~~~~ll~~--~---------~~~~~l~~~~~l~G~~~G~~~~~~~~~~se~fg~~~~g~~~g~~~~~~~l 332 (424)
+.++.++.+++.+... . .+...+....++.++++|..+.+...++++..|.++.|+.|++.+....+
T Consensus 321 --l~~~~~l~~~~~~~~~~l~~~~~~~~gi~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~p~~~egt~~al~~s~~~l 398 (468)
T TIGR00788 321 --FGVTTLLYTLSSLFDLILVKRWNLAFGISDEVFVLGDSIIAEVLAQLKFMPFLVLLARLCPSGCESSVFALLASILHL 398 (468)
T ss_pred --HHHHHHHHHHHHhCceeeeeccccccCCCCeeeeeehhHHHHHHHHHHHccHHHHHHHhCCCCceehHHHHHHHHHHH
Confidence 3555555555443221 0 11224455678889999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhhh
Q 014462 333 GSLIFSGVIASGIYDYYA 350 (424)
Q Consensus 333 gs~l~~~~l~g~l~d~~~ 350 (424)
|+.+ ++.++|.+++..|
T Consensus 399 g~~v-~~~~gg~l~~~~g 415 (468)
T TIGR00788 399 GSSV-SGFLGVLLMETIG 415 (468)
T ss_pred HHHH-HHHHHHHHHHHcC
Confidence 9997 8988889998876
No 212
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=98.25 E-value=2.3e-05 Score=80.33 Aligned_cols=122 Identities=16% Similarity=0.134 Sum_probs=73.6
Q ss_pred HHHhcHHHHH-HHcCCCchhH--HHHHHHHHhhhhhhhhhhhhhhhhhcccCchhHHHHHHHHHHHHHHHHHH-hchhHH
Q 014462 212 TVIDNLGQIC-QSLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVMAFALLYYA-IGWPGE 287 (424)
Q Consensus 212 ~~~~~l~~i~-~~~g~s~~~~--~~sl~si~~~~gr~~~G~lsd~~g~k~~~~r~~~l~~~~~~~~~~~ll~~-~~~~~~ 287 (424)
.....++.++ +++|++..+. +.+...++..++.+.+|+++||+|+||.. +.++.++.+++..+.. ..+.+.
T Consensus 20 ~~~~~l~~~l~~~~g~s~~~iGl~~a~~~~~~~i~~~~~g~l~dr~g~~r~~-----~~~~~~~~~~~~~~~~~~~~~~~ 94 (418)
T TIGR00889 20 SWLVTLGSYMSKTLHFSGAEIGWVYSSTGIAAILMPILVGIIADKWLSAQKV-----YAVCHFAGALLLFFAAQVTTPAG 94 (418)
T ss_pred HHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHH-----HHHHHHHHHHHHHHHHHhcCHHH
Confidence 3334455555 4589998765 88999999999999999999999764422 1333334434333333 344566
Q ss_pred HHHHHHHHHHHhhhhHhHHHHHHHHhh--------CcchhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 014462 288 IYVTTVLVGLSYGAHWAIVPAAASELF--------GLKSFGALYNFLTLASPAGSLIFSGVIASGI 345 (424)
Q Consensus 288 l~~~~~l~G~~~G~~~~~~~~~~se~f--------g~~~~g~~~g~~~~~~~lgs~l~~~~l~g~l 345 (424)
+++..++.|++.+...+...+...... ....+.+.+| .+|..+ +|.+.|.+
T Consensus 95 ~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~g~~~~~~~~~~r~~G------~lG~~i-g~~l~g~l 153 (418)
T TIGR00889 95 MFPVLLANSLAYMPTIALTNSISYANLPQAGLDVVTDFPPIRVMG------TIGFIA-AMWAVSLL 153 (418)
T ss_pred HHHHHHHHHHHHccHHHHHHHHHHHHHhhcCCCchhcCCCeeeeh------hHHHHH-HHHHHHHh
Confidence 666777778877666655544432221 1111223333 356665 78777766
No 213
>PRK10429 melibiose:sodium symporter; Provisional
Probab=98.21 E-value=5.6e-05 Score=78.69 Aligned_cols=162 Identities=11% Similarity=0.119 Sum_probs=104.8
Q ss_pred HHhcHHHHHHH-cCCCchhH--HHHHHHHHhhhhhhhhhhhhhhh----hhcccCchhHHHHHHHHHHHHHHHHHHh-c-
Q 014462 213 VIDNLGQICQS-LGYADTSI--YVSMISIWNFLGRVGGGYFSEAI----VRKFAYPRPVAMAVAQVVMAFALLYYAI-G- 283 (424)
Q Consensus 213 ~~~~l~~i~~~-~g~s~~~~--~~sl~si~~~~gr~~~G~lsd~~----g~k~~~~r~~~l~~~~~~~~~~~ll~~~-~- 283 (424)
+...++.++++ .|.+...+ +..+..++.++.-|+.|+++||. ||||. + +..+.+.++++..++.. .
T Consensus 25 ~~~~l~~yyt~v~Gls~~~vg~i~~i~ri~dai~dp~~G~lsD~t~sr~Grrrp----~-il~g~i~~~i~~~llf~~p~ 99 (473)
T PRK10429 25 VYMYLMYYYTDVVGLSVGLVGTLFLVARIWDAINDPIMGWIVNNTRSRWGKFKP----W-ILIGTLANSVVLFLLFSAHL 99 (473)
T ss_pred HHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhhchheeehhcCCCCCCCcch----h-HhhhhHHHHHHHHHHHcCCC
Confidence 33455666655 79998654 78888999999999999999965 55432 2 34445555555433322 1
Q ss_pred -h----hHHHHHHHHHHHHHhhhhHhHHHHHHHHhh-CcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhh
Q 014462 284 -W----PGEIYVTTVLVGLSYGAHWAIVPAAASELF-GLKSFGALYNFLTLASPAGSLIFSGVIASGIYDYYAEKQAGLL 357 (424)
Q Consensus 284 -~----~~~l~~~~~l~G~~~G~~~~~~~~~~se~f-g~~~~g~~~g~~~~~~~lgs~l~~~~l~g~l~d~~~~~~~~~~ 357 (424)
+ ...+.+..++.++++.....+..+..+|+- ..++|.+..++......+|+.+ .+.+...+.+..+....
T Consensus 100 ~~~~~~~~~~~~~~~l~~~~~t~~~ip~~al~~~lt~~~~eR~~l~~~~~~~~~ig~~~-~~~~~~~~~~~~g~~~~--- 175 (473)
T PRK10429 100 FEGTAQYVFVCVTYILWGMTYTIMDIPFWSLVPTLTLDKREREQLVPYPRFFASLAGFV-TAGFTLPFVNYVGGGDR--- 175 (473)
T ss_pred CCccHHHHHHHHHHHHHHHHHHHHcchHHhhhHHhCCCHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHhCCCch---
Confidence 1 123444556677888888888999999998 5788999999877777777766 44444433333221000
Q ss_pred hhccCCCCCcccCCCCCCcccCCcchHHHHHHHHHHHHHHHHHHHHHh
Q 014462 358 WKYNGNMLPVSFRDQETPTCLGSICYSITCGIMAGLCIIAMVMSLIVV 405 (424)
Q Consensus 358 ~~~~~~~~~~~~~~~~~~~c~g~~c~~~~f~i~a~~~~~~~~l~~~l~ 405 (424)
...|+....+.+++.+++...++...
T Consensus 176 ----------------------~~g~~~~~~i~~~~~~~~~~~~~~~~ 201 (473)
T PRK10429 176 ----------------------GFGFQMFTLVLIAFFIVSTIITLRNV 201 (473)
T ss_pred ----------------------hhhHHHHHHHHHHHHHHHHHHHHcCc
Confidence 01277777777777776666555433
No 214
>PRK11462 putative transporter; Provisional
Probab=98.18 E-value=0.00011 Score=76.26 Aligned_cols=164 Identities=9% Similarity=0.061 Sum_probs=109.6
Q ss_pred hcHHHHHHH-cCCCchhH--HHHHHHHHhhhhhhhhhhhhhhhhhcccCchhHHHHHHHHHHHHHHHHHH-hch------
Q 014462 215 DNLGQICQS-LGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVMAFALLYYA-IGW------ 284 (424)
Q Consensus 215 ~~l~~i~~~-~g~s~~~~--~~sl~si~~~~gr~~~G~lsd~~g~k~~~~r~~~l~~~~~~~~~~~ll~~-~~~------ 284 (424)
.++..++.+ .|.++..+ +..+.-++.++.-|+.|+++||...|..-.||++ .++.+.++++..++. ...
T Consensus 30 ~~l~~fyt~~~Gl~~~~~g~i~~~~ri~Dai~Dp~~G~~~D~t~~r~Gr~rp~i-l~g~i~~~i~~~llf~~p~~s~~~~ 108 (460)
T PRK11462 30 LYMMFFYTDIFGIPAGFVGTMFLVARALDAISDPCMGLLADRTRSRWGKFRPWV-LFGALPFGIVCVLAYSTPDLSMNGK 108 (460)
T ss_pred HHHHHHHHHhhCCCHHHHHHHHHHHHHHHHHHhhhheehhccCCCCCCCcchhH-hHHHHHHHHHHHHHHhCCCCCcchH
Confidence 345555544 89987654 7788889999999999999998755444334444 444445555544432 211
Q ss_pred hHHHHHHHHHHHHHhhhhHhHHHHHHHHhhC-cchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhccCC
Q 014462 285 PGEIYVTTVLVGLSYGAHWAIVPAAASELFG-LKSFGALYNFLTLASPAGSLIFSGVIASGIYDYYAEKQAGLLWKYNGN 363 (424)
Q Consensus 285 ~~~l~~~~~l~G~~~G~~~~~~~~~~se~fg-~~~~g~~~g~~~~~~~lgs~l~~~~l~g~l~d~~~~~~~~~~~~~~~~ 363 (424)
...+++..++..+++.....+..+..+|+-. .++|++..++-..+..+|+.+ ++.+...+....+.+.
T Consensus 109 ~~y~~~~~~~~~~~~t~~~ipy~al~~~lt~d~~eRt~l~s~r~~~~~iG~~~-~~~~~~plv~~~g~~~---------- 177 (460)
T PRK11462 109 MIYAAITYTLLTLLYTVVNIPYCALGGVITNDPTQRISLQSWRFVLATAGGML-STVLMMPLVNLIGGDN---------- 177 (460)
T ss_pred HHHHHHHHHHHHHHHHHHhccHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHhCCCc----------
Confidence 2244556667788898888899999999986 678999999999999988876 5666555444433110
Q ss_pred CCCcccCCCCCCcccCCcchHHHHHHHHHHHHHHHHHHHHHh
Q 014462 364 MLPVSFRDQETPTCLGSICYSITCGIMAGLCIIAMVMSLIVV 405 (424)
Q Consensus 364 ~~~~~~~~~~~~~c~g~~c~~~~f~i~a~~~~~~~~l~~~l~ 405 (424)
...+|+....+.+.+.+++..+++...
T Consensus 178 ---------------~~~g~~~~~~i~~ii~~i~~~i~~~~~ 204 (460)
T PRK11462 178 ---------------KPLGFQGGIAVLSVVAFMMLAFCFFTT 204 (460)
T ss_pred ---------------hhhhHHHHHHHHHHHHHHHHHHHHhcc
Confidence 011388877777777666655554433
No 215
>PRK09848 glucuronide transporter; Provisional
Probab=98.15 E-value=0.00014 Score=74.94 Aligned_cols=119 Identities=15% Similarity=0.163 Sum_probs=76.5
Q ss_pred HHHHHHH-cCCCchhH--HHHHHHHHhhhhhhhhhhhhhhhhhcccCchhHHHHHHHHHHHHHHHHHHhc-----h--hH
Q 014462 217 LGQICQS-LGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVMAFALLYYAIG-----W--PG 286 (424)
Q Consensus 217 l~~i~~~-~g~s~~~~--~~sl~si~~~~gr~~~G~lsd~~g~k~~~~r~~~l~~~~~~~~~~~ll~~~~-----~--~~ 286 (424)
++.++++ .|++...+ +.++..++.++..+..|+++||.++|+.-.|++.+..+...+..+.+++... . ..
T Consensus 31 l~~y~~~~~gl~~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~~~~~Gr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 110 (448)
T PRK09848 31 LLSYYTDVAGVGAAAAGTMLLLVRVFDAFADVFAGRVVDSVNTRWGKFRPFLLFGTAPLMIFSVLVFWVPTDWSHSSKVV 110 (448)
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhhhheeeeecCCCCCcCchHHHHHHHHHHHHHHHHHHhCcCCCCcchHHH
Confidence 3445555 79987655 8889999999999999999999977655445554444333333333333221 1 12
Q ss_pred HHHHHHHHHHHHhhhhHhHHHHHHHHhhCc-chhhHHHHHHHHHHHHHHH
Q 014462 287 EIYVTTVLVGLSYGAHWAIVPAAASELFGL-KSFGALYNFLTLASPAGSL 335 (424)
Q Consensus 287 ~l~~~~~l~G~~~G~~~~~~~~~~se~fg~-~~~g~~~g~~~~~~~lgs~ 335 (424)
..++..++.+++++...++..+...++... ++|.+..++-..+..++..
T Consensus 111 ~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~r~~~~~~r~~~~~~~~~ 160 (448)
T PRK09848 111 YAYLTYMGLGLCYSLVNIPYGSLATAMTQQPQSRARLGAARGIAASLTFV 160 (448)
T ss_pred HHHHHHHHHHHHHHHhcccHhhhhhhhcCCHHHHHHHHHHHHHHHHHHHH
Confidence 234456677888888888777877777644 5677776665554444433
No 216
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=98.13 E-value=9.7e-05 Score=75.39 Aligned_cols=129 Identities=19% Similarity=0.252 Sum_probs=86.1
Q ss_pred HHHHHHHHhhhhHHHHHhcHHHHHHHcCCCchhH--HHHHHHHHhhhhhhhhhhhhhhhhhcccCchhHHHHHHHHHHHH
Q 014462 198 LLFFSLVLASGSGLTVIDNLGQICQSLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVMAF 275 (424)
Q Consensus 198 ll~~~~~~~~~~~~~~~~~l~~i~~~~g~s~~~~--~~sl~si~~~~gr~~~G~lsd~~g~k~~~~r~~~l~~~~~~~~~ 275 (424)
.+.+..+...|+ +...++.++++.|+|..++ +.++..+..+++.+++|+++||.+++++. +.+..++.++
T Consensus 9 ~~~f~~f~~~G~---~~p~~~~~L~~~G~s~~qIG~l~a~~~~~~i~~~~~~g~~aDr~~~~~~~-----l~~~~l~~~~ 80 (400)
T PF03825_consen 9 LMYFLYFFAYGA---FLPYLPLYLESRGFSGTQIGILLAVGPLARIVSPPFWGAIADRFGSAKRI-----LALLSLLSAL 80 (400)
T ss_pred HHHHHHHHHHHH---HHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhHHHH-----HHHHHHHHHH
Confidence 333444444444 3345788999999998876 88899999999999999999999765433 1233333333
Q ss_pred HHHHHH-hchhHHHHHHHHHHHHHhhhhHhHHHHHHHHhhCcchhhHHHHHHHHHHHHHHHH
Q 014462 276 ALLYYA-IGWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLI 336 (424)
Q Consensus 276 ~~ll~~-~~~~~~l~~~~~l~G~~~G~~~~~~~~~~se~fg~~~~g~~~g~~~~~~~lgs~l 336 (424)
..+... ..+.+.+....++..+++....++.-+++.+.-+ +.+..||-.-+.+++|=.+
T Consensus 81 ~~~~~~~~~~f~~~~~~~~l~~~~~~p~~pl~dsi~~~~~~--~~~~~YG~iRlwGSiGf~~ 140 (400)
T PF03825_consen 81 ALLLLAFSSSFWWLFVIMLLFSFFFSPTMPLSDSIALSYLG--DRGKDYGRIRLWGSIGFIV 140 (400)
T ss_pred HHHHHHHhccHHHHHHHHHHHHHHHccHHHHHHHHHHHHcc--cccCCCCcchhhhhHHHHH
Confidence 333322 4456666777777788888888888888888774 3455666555555555554
No 217
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=98.07 E-value=0.00011 Score=70.07 Aligned_cols=131 Identities=17% Similarity=0.133 Sum_probs=90.3
Q ss_pred hhhHHHHHhcHHHHHHHcCCCchhH--HHHHHHHHhhhhhhhhhhhhhhhhhcccCchhHHHHHHHHHHHHHHHHHH--h
Q 014462 207 SGSGLTVIDNLGQICQSLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVMAFALLYYA--I 282 (424)
Q Consensus 207 ~~~~~~~~~~l~~i~~~~g~s~~~~--~~sl~si~~~~gr~~~G~lsd~~g~k~~~~r~~~l~~~~~~~~~~~ll~~--~ 282 (424)
.|..+.+..+-|++-+++|+|.++. +...-.++..+| +.+|.+.|++|++. .+.++.+...++..++. .
T Consensus 15 ~Gt~Y~Fs~yS~~Lk~~l~~sq~~l~~l~~~~~~G~~~G-~~~G~l~d~~gp~~------~l~iG~~~~~~GY~~~~l~~ 87 (250)
T PF06813_consen 15 SGTTYTFSAYSPQLKSRLGYSQSQLNTLSTAGDIGSYFG-ILAGLLYDRFGPWV------VLLIGAVLGFVGYGLLWLAV 87 (250)
T ss_pred cCcccchhhhhHHHHHHhCCCHHHHHHHHHHHHHHhhcc-HHHHHHHHhcchHH------HHHHHHHHHHHHHHHHHHHH
Confidence 3445566667888888899998765 555666777775 88999999998653 33666666666665543 1
Q ss_pred c------hhHHHHHHHHHHHHHhhhhHhHHHHHHHHhhCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 014462 283 G------WPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIASGIY 346 (424)
Q Consensus 283 ~------~~~~l~~~~~l~G~~~G~~~~~~~~~~se~fg~~~~g~~~g~~~~~~~lgs~l~~~~l~g~l~ 346 (424)
. +.+.+.+...+.|.+.+...+.......+.|| ++||++.|+.-....+++.+|+. +...++
T Consensus 88 ~~~i~~~~~~~~~~~~~l~~~s~~~~~ta~lvt~~~NFP-~~RG~vvgilk~~~GLSaai~t~-i~~~~f 155 (250)
T PF06813_consen 88 SGRIPSLPVWLMCLFLFLGGNSSCWFNTASLVTCVRNFP-RSRGTVVGILKGFFGLSAAIFTQ-IYSAFF 155 (250)
T ss_pred hCccCccchHHHHHHHHHHcccHHHhhhHHHHHHHHhCc-cccCceehhhhHHHHhHHHHHHH-HHHHHc
Confidence 1 23444555555555555555666666778996 68999999999999998888643 444333
No 218
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=98.06 E-value=0.00016 Score=75.30 Aligned_cols=180 Identities=13% Similarity=0.081 Sum_probs=119.2
Q ss_pred HHHHHHHHHHHHhhhhHHHHHhcHHHH-HHH-cCCCc--------h----hHHHHHHHHHhhhhhhhhhhhhhhhhh-cc
Q 014462 194 ADFLLLFFSLVLASGSGLTVIDNLGQI-CQS-LGYAD--------T----SIYVSMISIWNFLGRVGGGYFSEAIVR-KF 258 (424)
Q Consensus 194 ~~fwll~~~~~~~~~~~~~~~~~l~~i-~~~-~g~s~--------~----~~~~sl~si~~~~gr~~~G~lsd~~g~-k~ 258 (424)
+.+|.+.+..++...+.+.+..+...+ .++ ++.++ . .....+.++.+.+..++--.+..++|+ |+
T Consensus 258 ~~m~~l~~vqffsW~a~f~~~~y~T~~vg~~v~~~~~~~~~~y~~gvr~G~~~l~~~s~~~~i~s~~l~~l~~~~g~~k~ 337 (477)
T TIGR01301 258 RPVWILLLVTCLNWIAWFPFILFDTDWMGREVYGGSVNQGAKYDDGVRAGAFGLMLNSVVLGITSIGMEKLCRGWGAGKR 337 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHcCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchh
Confidence 467888888888877777665554444 343 43321 1 113334444444444445555555553 22
Q ss_pred cCchhHHHHHHHHHHHHHHHHHHh-ch---------------------hHHHHHHHHHHHHHhhhhHhHHHHHHHHhhCc
Q 014462 259 AYPRPVAMAVAQVVMAFALLYYAI-GW---------------------PGEIYVTTVLVGLSYGAHWAIVPAAASELFGL 316 (424)
Q Consensus 259 ~~~r~~~l~~~~~~~~~~~ll~~~-~~---------------------~~~l~~~~~l~G~~~G~~~~~~~~~~se~fg~ 316 (424)
. ..+++++.++++....+ .+ .+..++...++|+..+...++-++++++.-+.
T Consensus 338 ~------~~~s~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Gi~~A~~~siPfal~s~~~~~ 411 (477)
T TIGR01301 338 L------WGIVNIILAICLAATVLVTYVAKNSRYYDGDGESLPPPTGIKASALIVFAILGIPLAITYSIPFALASIRSSN 411 (477)
T ss_pred H------HHHHHHHHHHHHHHHHHHHhhhhccccccccccccCcchhhHHHHHHHHHHhhHHHHHHHHHhHHHHHHHccc
Confidence 2 24555555555444321 11 25667788899999999999999999999984
Q ss_pred --chhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhccCCCCCcccCCCCCCcccCCcchHHHHHHHHHHH
Q 014462 317 --KSFGALYNFLTLASPAGSLIFSGVIASGIYDYYAEKQAGLLWKYNGNMLPVSFRDQETPTCLGSICYSITCGIMAGLC 394 (424)
Q Consensus 317 --~~~g~~~g~~~~~~~lgs~l~~~~l~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~g~~c~~~~f~i~a~~~ 394 (424)
++.|...|+.|.+..+..++ .....|.+.+..+++ -..++.+.++..
T Consensus 412 ~~~~~G~~mgilN~~I~lpQii-~sl~~g~~~~~~g~~------------------------------~~~~~~~~gv~~ 460 (477)
T TIGR01301 412 LGAGQGLSMGVLNLAIVIPQII-VSLGSGPWDQLFGGG------------------------------NLPAFVVGAVAA 460 (477)
T ss_pred cCCCCcchhhHHHHHHHHHHHH-HHHHHHHHHHHcCCC------------------------------CeeHHHHHHHHH
Confidence 56699999999999999998 566777766655521 457888888888
Q ss_pred HHHHHHHHHHhhhhhH
Q 014462 395 IIAMVMSLIVVHRTKS 410 (424)
Q Consensus 395 ~~~~~l~~~l~~~~~~ 410 (424)
++++++++++..|.++
T Consensus 461 ~~aa~~~~~~~~~~~~ 476 (477)
T TIGR01301 461 FVSGLLALILLPRPRV 476 (477)
T ss_pred HHHHHHHHHhCCCCCC
Confidence 8888888877766553
No 219
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=98.04 E-value=1.5e-05 Score=80.78 Aligned_cols=104 Identities=17% Similarity=0.223 Sum_probs=79.9
Q ss_pred HHHHHHHHhhhhhhhhhhhhhhhhhcccCchhHHHHHHHHHHHHHHHHHH----hch----hHHHHHHHHHHHHHhhhhH
Q 014462 232 YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVMAFALLYYA----IGW----PGEIYVTTVLVGLSYGAHW 303 (424)
Q Consensus 232 ~~sl~si~~~~gr~~~G~lsd~~g~k~~~~r~~~l~~~~~~~~~~~ll~~----~~~----~~~l~~~~~l~G~~~G~~~ 303 (424)
.-....+++.+|+++.||+.||+|||+.+ -..+++|.++-.+.. ..+ ..++....++.|+|.|+=+
T Consensus 89 Vn~~A~vGti~GQl~FG~lgD~~GRK~vY------G~~liImIi~t~~~~~s~~~~~~~~~m~~L~~~R~~LGiGIGGDY 162 (538)
T KOG0252|consen 89 VNAAALVGTIFGQLFFGWLGDKFGRKKVY------GKELIIMIICSALSGLSVGTTSPLGVMMTLCFFRFLLGIGIGGDY 162 (538)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhcchhhh------hHHHHHHHHHHHHhccCCCCCCCcchhhHHHHHHHHhhccccCCC
Confidence 66677899999999999999999999988 333444444443322 222 3567888999999999999
Q ss_pred hHHHHHHHHhhCcchhhHHHHHHHHHHHHHHHHHHHHHH
Q 014462 304 AIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIA 342 (424)
Q Consensus 304 ~~~~~~~se~fg~~~~g~~~g~~~~~~~lgs~l~~~~l~ 342 (424)
+...+++||.--.+.||+..+.+......|... |.+++
T Consensus 163 PlSAtI~SE~an~~~RGa~iaavFa~Qg~Gila-G~ivt 200 (538)
T KOG0252|consen 163 PLSATIMSESANKKTRGAFIAAVFAMQGFGILA-GGIVA 200 (538)
T ss_pred cchHHHhhhhhhhccccceeEEEEEecchhHhh-ccHHH
Confidence 999999999999999999888877777766653 54433
No 220
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=98.00 E-value=6.6e-08 Score=99.32 Aligned_cols=134 Identities=20% Similarity=0.272 Sum_probs=103.5
Q ss_pred HHHHHHHHhhhhhhhhhhhhhhhhhcccCchhHHHHHHHHHHHHHHHHHHh-c---hhHHHHHHHHHHHHHhhhhHhHHH
Q 014462 232 YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVMAFALLYYAI-G---WPGEIYVTTVLVGLSYGAHWAIVP 307 (424)
Q Consensus 232 ~~sl~si~~~~gr~~~G~lsd~~g~k~~~~r~~~l~~~~~~~~~~~ll~~~-~---~~~~l~~~~~l~G~~~G~~~~~~~ 307 (424)
..+...++..+|.++.|+++||+|||+.+ .++.+++.++.++... . +.+.+.++.++.|++.|...+..+
T Consensus 51 ~~~~~~~g~~~G~~~~g~~~d~~GRk~~~------~~~~~~~~i~~~~~~~~~~~~~~~~~~~~R~~~G~~~g~~~~~~~ 124 (451)
T PF00083_consen 51 LTSSFFIGAIVGALIFGFLADRYGRKPAL------IISALLMIIGSILIAFAPSYNNFWMLLIGRFLIGFGIGGAYVVSP 124 (451)
T ss_pred HHHHHHhhhcccccccccccccccccccc------ccccccccccccccccccccccccccccccccccccccccccccc
Confidence 78889999999999999999999999876 5566666666666553 3 467788899999999999999999
Q ss_pred HHHHHhhCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhccCCCCCcccCCCCCCcccCCcchHHHH
Q 014462 308 AAASELFGLKSFGALYNFLTLASPAGSLIFSGVIASGIYDYYAEKQAGLLWKYNGNMLPVSFRDQETPTCLGSICYSITC 387 (424)
Q Consensus 308 ~~~se~fg~~~~g~~~g~~~~~~~lgs~l~~~~l~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~g~~c~~~~f 387 (424)
.++.|..|+|+||...++...+..+|..+ +..+ +........ .+.||..+
T Consensus 125 ~~~~E~~~~~~R~~~~~~~~~~~~~G~~~-~~~~-~~~~~~~~~----------------------------~~~Wr~~~ 174 (451)
T PF00083_consen 125 IYISEIAPPKHRGFLSSLFQLFWALGILL-ASLI-GYIVSYYSD----------------------------NWGWRILL 174 (451)
T ss_pred ccccccccccccccccccccccccccccc-cccc-ccccccccc----------------------------cccccccc
Confidence 99999999999999999999998888775 4433 322211110 11289888
Q ss_pred HHHHHHHHHHHHHH
Q 014462 388 GIMAGLCIIAMVMS 401 (424)
Q Consensus 388 ~i~a~~~~~~~~l~ 401 (424)
.+.+..+++..+..
T Consensus 175 ~~~~~~~l~~~~~~ 188 (451)
T PF00083_consen 175 IFGAIPSLLVLLLR 188 (451)
T ss_pred cccccccccccccc
Confidence 88887776654444
No 221
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=97.95 E-value=0.00091 Score=66.33 Aligned_cols=124 Identities=15% Similarity=0.156 Sum_probs=82.3
Q ss_pred HHHHcCCCchhH--HHHHHHHHhhhhhhhhhhhhhhhhhcccCchhHHHHHHHHHHHHHHHHHHhchhHHHHHHHHHHHH
Q 014462 220 ICQSLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVMAFALLYYAIGWPGEIYVTTVLVGL 297 (424)
Q Consensus 220 i~~~~g~s~~~~--~~sl~si~~~~gr~~~G~lsd~~g~k~~~~r~~~l~~~~~~~~~~~ll~~~~~~~~l~~~~~l~G~ 297 (424)
.+++.|++..++ +...-...+.+..+..|.++||+|||+.- .+..++.++++++-...+...++++.++.|+
T Consensus 60 LY~~yg~~~~qIa~Lf~~Gf~Ss~i~g~~~G~laD~~Grk~~c------l~~cily~~scl~k~~~~~~~L~~GRvlgGi 133 (354)
T PF05631_consen 60 LYESYGFSEHQIAILFVAGFASSAIFGTFVGSLADRYGRKKAC------LLFCILYSLSCLTKHSSNYPVLLLGRVLGGI 133 (354)
T ss_pred HHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHH------HHHHHHHHHHHHHHhccccHHHHHHHHHHHH
Confidence 456789987765 45555566667778888999999998754 5555666777766566778889999999999
Q ss_pred HhhhhHhHHHHH-HHHh----hCcchhhHHHHHHH-HHHHHHHHHHHHHHHHHHHhhhh
Q 014462 298 SYGAHWAIVPAA-ASEL----FGLKSFGALYNFLT-LASPAGSLIFSGVIASGIYDYYA 350 (424)
Q Consensus 298 ~~G~~~~~~~~~-~se~----fg~~~~g~~~g~~~-~~~~lgs~l~~~~l~g~l~d~~~ 350 (424)
+....++..=+. +.|. ||.+..+..++.+. ..+.+-.++ ++.++-.+.|..+
T Consensus 134 aTSLLfS~FEsW~V~Eh~~~g~~~~~L~~tF~~~tf~~n~~vAI~-aGv~a~~l~~~~~ 191 (354)
T PF05631_consen 134 ATSLLFSAFESWMVHEHNKRGFPQEWLSDTFSLATFFGNGVVAIG-AGVVANVLADWFG 191 (354)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHhHHHHHH-HhHHHHHHHHHhC
Confidence 998887765443 3333 44444555555544 344444443 5555555555544
No 222
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=97.94 E-value=6.2e-05 Score=75.14 Aligned_cols=187 Identities=12% Similarity=0.058 Sum_probs=124.5
Q ss_pred CCCCCCHHHhhhhHHHHHHHHHHHHhhhhHHHHHhcHHHHH-HHcCCCch-hH--HHHHHHHHhhhhhhhhhhhhhhhhh
Q 014462 181 RGEDFTLPQALMKADFLLLFFSLVLASGSGLTVIDNLGQIC-QSLGYADT-SI--YVSMISIWNFLGRVGGGYFSEAIVR 256 (424)
Q Consensus 181 ~~~~~t~~~~l~~~~fwll~~~~~~~~~~~~~~~~~l~~i~-~~~g~s~~-~~--~~sl~si~~~~gr~~~G~lsd~~g~ 256 (424)
..++.+++++++++..|....+......+.-..-.-++... +++. ++. .. ..-..++...+|..+.|.+.||+++
T Consensus 257 ~~~~~~~~~Ll~dP~I~~~agai~~~n~~lafLePtlslwm~e~m~-~p~w~~G~~fLp~~~~y~ig~~lfg~la~k~~~ 335 (464)
T KOG3764|consen 257 TEQGTPMWSLLMDPYILLIAGAITFSNSSLAFLEPTLSLWMLETMF-TPGWEVGLAFLPASLSYAIGTNLFGKLADKYPH 335 (464)
T ss_pred cccCccHHHHHhCchHhhhhcchhhccchHHHhCcccHHHHHHhcc-CCCcceeeeecccccchhccCchHHHHHHhcCc
Confidence 33456799999999999876655433322222223344433 4454 222 22 4556778899999999999999986
Q ss_pred cccCchhHHHHHHHHHHHHHHHHHH-hchhHHHHHHHHHHHHHhhhhHhHHHHHHHHhhCcc------hhhHHHHHHHHH
Q 014462 257 KFAYPRPVAMAVAQVVMAFALLYYA-IGWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLK------SFGALYNFLTLA 329 (424)
Q Consensus 257 k~~~~r~~~l~~~~~~~~~~~ll~~-~~~~~~l~~~~~l~G~~~G~~~~~~~~~~se~fg~~------~~g~~~g~~~~~ 329 (424)
.++. ..+.++++..+...... .++...+++.....|++.+...+....+..++...+ .+|..|++...+
T Consensus 336 ~~wl----~~~~gl~~~G~~~~~iP~~~~~~~L~vp~~~l~~~i~~~dasl~P~l~~lvd~rh~s~~~vYGsVyaIad~a 411 (464)
T KOG3764|consen 336 LRWL----LSLGGLATVGVSSGPIPFATSIAQLWVPNFGLGFGIGLADASLIPTLGYLVDPRHVSGFNVYGSVYAIADAA 411 (464)
T ss_pred hhHH----HHHHHHHHHHHHhchhHhhhhHHHHhhhhHHHHHHHHHHHHHHhhhhHHhcchhhccccceeeeHHHHHHHH
Confidence 4432 12222222222222222 233445677777777777776666666666665443 478999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhhhhhhhhhccCCCCCcccCCCCCCcccCCcchHHHHHHHHHHHHHHHHHHHHHh
Q 014462 330 SPAGSLIFSGVIASGIYDYYAEKQAGLLWKYNGNMLPVSFRDQETPTCLGSICYSITCGIMAGLCIIAMVMSLIVV 405 (424)
Q Consensus 330 ~~lgs~l~~~~l~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~g~~c~~~~f~i~a~~~~~~~~l~~~l~ 405 (424)
..+|..+ ||.++|.++++.| |+|.-.+.+..+++-.-+..+++
T Consensus 412 ~sla~a~-GP~~gg~iv~~iG--------------------------------F~wl~~iig~~n~iyapvl~ll~ 454 (464)
T KOG3764|consen 412 FSLAYAI-GPTFGGSLVEAIG--------------------------------FEWLMTIIGILNLIYAPVLLLLR 454 (464)
T ss_pred HHHhhhc-cccccchheeehh--------------------------------HHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999998 9999999999888 99999999999988776665544
No 223
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=97.93 E-value=0.00058 Score=73.90 Aligned_cols=71 Identities=15% Similarity=0.244 Sum_probs=59.5
Q ss_pred HHHhhhhHHHHHHHHHHHHhhhhHHHHHhcHHHHHHH-cCCCchhH--HHHHHHH-Hhhhhhhhhhhhhhhhhhc
Q 014462 187 LPQALMKADFLLLFFSLVLASGSGLTVIDNLGQICQS-LGYADTSI--YVSMISI-WNFLGRVGGGYFSEAIVRK 257 (424)
Q Consensus 187 ~~~~l~~~~fwll~~~~~~~~~~~~~~~~~l~~i~~~-~g~s~~~~--~~sl~si-~~~~gr~~~G~lsd~~g~k 257 (424)
++++++++.+|...+..++..+...++..++|.++++ +|+++.++ ++.+..+ +..+|.+++|+++||++.+
T Consensus 323 ~~~Ll~n~~f~~~~l~~~~~~~~~~~~~~~lP~yl~~~~g~s~~~ag~l~~~~~i~~~~vG~~l~G~l~~r~~~~ 397 (633)
T TIGR00805 323 IKRLLCNPIYMLVILAQVIDSLAFNGYITFLPKYLENQYGISSAEANFLIGVVNLPAAGLGYLIGGFIMKKFKLN 397 (633)
T ss_pred HHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHhhhhhhhHHHHHHhhhhheeeeeccc
Confidence 5569999999999999999988888999999999976 89987655 5555555 5689999999999999854
No 224
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=97.90 E-value=0.00055 Score=70.59 Aligned_cols=169 Identities=15% Similarity=0.156 Sum_probs=122.1
Q ss_pred HHHhcHHHHHHH-cCCCchhH--HHHHHHHHhhhhhhhhhhhhhhhhhcccCchhHHHHHHHHHHHHHHHHHHhc-----
Q 014462 212 TVIDNLGQICQS-LGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVMAFALLYYAIG----- 283 (424)
Q Consensus 212 ~~~~~l~~i~~~-~g~s~~~~--~~sl~si~~~~gr~~~G~lsd~~g~k~~~~r~~~l~~~~~~~~~~~ll~~~~----- 283 (424)
.+..++..++.+ .|.++..+ +..+.-++.++.-|+.|.++||..+|+.--||+.+..+.-+..+..+++...
T Consensus 30 ~~~~yLl~fYTdv~Gis~~~aG~iflv~RiiDAi~DP~~G~i~D~t~~r~GrfRP~lL~g~ip~~i~~~l~F~~p~~~~~ 109 (467)
T COG2211 30 IVVLYLLFFYTDVFGLSAALAGTIFLVARIIDAITDPIMGFIVDRTRSRWGRFRPWLLWGAIPFAIVAVLLFITPDFSMT 109 (467)
T ss_pred HHHHHHHHHHhcccCCcHHHHHHHHHHHHHHHHHhcchheeeecccccccccccHHHHHHhHHHHHHHHHHHcCCCcccC
Confidence 344566677766 89998754 7777889999999999999999887776667766655554444444444332
Q ss_pred -hhHHHHHHHHHHHHHhhhhHhHHHHHHHHhhC-cchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhcc
Q 014462 284 -WPGEIYVTTVLVGLSYGAHWAIVPAAASELFG-LKSFGALYNFLTLASPAGSLIFSGVIASGIYDYYAEKQAGLLWKYN 361 (424)
Q Consensus 284 -~~~~l~~~~~l~G~~~G~~~~~~~~~~se~fg-~~~~g~~~g~~~~~~~lgs~l~~~~l~g~l~d~~~~~~~~~~~~~~ 361 (424)
.....++...+.+++|.....+..++.+|+-. .++|.+..+.-.....+|+.+ ...+.+.+....+....
T Consensus 110 ~k~~ya~vtY~l~~l~YT~vniPy~al~~~iT~d~~ER~~l~s~R~~~~~~g~~l-~~~~~~plv~~~g~~~~------- 181 (467)
T COG2211 110 GKLIYALVTYMLLGLGYTLVNIPYGALGPEITQDPQERASLTSWRMVFASLGGLL-VAVLFPPLVKLFGGGDK------- 181 (467)
T ss_pred cchHHHHHHHHHHHHHHHheeCchhhcchhhcCCHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHhCCCcc-------
Confidence 13455677888999999999999999999875 467999999999999999887 56677766666653210
Q ss_pred CCCCCcccCCCCCCcccCCcchHHHHHHHHHHHHHHHHHHHHHhh
Q 014462 362 GNMLPVSFRDQETPTCLGSICYSITCGIMAGLCIIAMVMSLIVVH 406 (424)
Q Consensus 362 ~~~~~~~~~~~~~~~c~g~~c~~~~f~i~a~~~~~~~~l~~~l~~ 406 (424)
.+.|+.+-.+++.+..++++.++.-.+
T Consensus 182 ------------------~~g~~~~~~~~~vi~~i~~l~~~~~v~ 208 (467)
T COG2211 182 ------------------ALGYQGTALVLGVIGVILLLFCFFNVK 208 (467)
T ss_pred ------------------hhhHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 123888888888877777766655443
No 225
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=97.86 E-value=0.00012 Score=75.52 Aligned_cols=177 Identities=18% Similarity=0.191 Sum_probs=114.9
Q ss_pred HhhhhHHHHHHH-HHHHHhhhhHHHHHhcHHHHHHHcCCCchhH-HHH-HHHHHhhhhhhhhhhhhhhhhhcccCchhHH
Q 014462 189 QALMKADFLLLF-FSLVLASGSGLTVIDNLGQICQSLGYADTSI-YVS-MISIWNFLGRVGGGYFSEAIVRKFAYPRPVA 265 (424)
Q Consensus 189 ~~l~~~~fwll~-~~~~~~~~~~~~~~~~l~~i~~~~g~s~~~~-~~s-l~si~~~~gr~~~G~lsd~~g~k~~~~r~~~ 265 (424)
+++.+++..+++ ++.+.+.+.++. .+.|=-.+|+.|..+.-- .++ +--.+-.+.=+..+++.+|+|+-+.+
T Consensus 366 ~~~~s~~~llff~~av~mG~g~~lv-~tFLfWHled~~~~~~LfGv~~a~~~~gEI~~~ffs~klI~kiGHv~v~----- 439 (618)
T KOG3762|consen 366 KVFASPHILLFFFVAVVMGAGVGLV-FTFLFWHLEDLGGIKTLFGVVSALCHAGEILFYFFSFKLIEKIGHVNVM----- 439 (618)
T ss_pred HHhcCCCEEehhHHHHHHHHHHHHH-HHHHHHHHhhcCCcceeeeehhhhhccchHHHHHHHHHHHHHhccccee-----
Confidence 345555544433 333333333332 223323457776433211 222 22233344456677999999987766
Q ss_pred HHHHHHHHHHHHHHHHh-chhHHHHHHHHHHHHHhhhhHhHHHHHHHHhhCcchhhHHHHHHHH-HHHHHHHHHHHHHHH
Q 014462 266 MAVAQVVMAFALLYYAI-GWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTL-ASPAGSLIFSGVIAS 343 (424)
Q Consensus 266 l~~~~~~~~~~~ll~~~-~~~~~l~~~~~l~G~~~G~~~~~~~~~~se~fg~~~~g~~~g~~~~-~~~lgs~l~~~~l~g 343 (424)
.+++....+=++.++. .++|.....=++.|+.++..|+...++++...|++-++++.+++.. .-.+|-.+ |.+|+|
T Consensus 440 -~lgLa~~~~Rf~~~S~L~n~W~vLPieilqgit~aliWaa~~sY~s~vaPp~l~at~Q~l~~g~f~GlG~g~-GslIGG 517 (618)
T KOG3762|consen 440 -YLGLACNVGRFLYYSYLQNPWMVLPIEILQGITHALIWAAIISYASHVAPPGLRATAQGLLQGIFHGLGKGL-GSLIGG 517 (618)
T ss_pred -eehhhHHHHHHHHHHHhcCchheeeHHHHHHHHHHHHHHHHHHHHHhhCCCcchHHHHHHHHHHhcccCcch-hhhhhh
Confidence 5555555555555553 5677777778899999999999999999999999999999998765 35666665 777888
Q ss_pred HHHhhhhhhhhhhhhhccCCCCCcccCCCCCCcccCCcchHHHHHHHHHHHHHHHHHHHHHh
Q 014462 344 GIYDYYAEKQAGLLWKYNGNMLPVSFRDQETPTCLGSICYSITCGIMAGLCIIAMVMSLIVV 405 (424)
Q Consensus 344 ~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~g~~c~~~~f~i~a~~~~~~~~l~~~l~ 405 (424)
.+..+.+ -+.+|.+.+..|++.++....+.
T Consensus 518 ~~v~~fg--------------------------------~~ttf~~~giAcl~~l~~~~~iq 547 (618)
T KOG3762|consen 518 FVVERFG--------------------------------ARTTFRIFGIACLVTLALFISIQ 547 (618)
T ss_pred hhheeeh--------------------------------hHHHHHHHHHHHHHHHHHHHHhh
Confidence 8888877 46778877777777665555444
No 226
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=97.80 E-value=0.00011 Score=74.45 Aligned_cols=161 Identities=14% Similarity=0.107 Sum_probs=109.2
Q ss_pred CCCHHHhhhhHHHHHHHHHHHHhhhhHHHHHhcHHHHHHHcCCCc--hhHHHHHHHHHhhhhhhhhhhhhhhhhhcccCc
Q 014462 184 DFTLPQALMKADFLLLFFSLVLASGSGLTVIDNLGQICQSLGYAD--TSIYVSMISIWNFLGRVGGGYFSEAIVRKFAYP 261 (424)
Q Consensus 184 ~~t~~~~l~~~~fwll~~~~~~~~~~~~~~~~~l~~i~~~~g~s~--~~~~~sl~si~~~~gr~~~G~lsd~~g~k~~~~ 261 (424)
..++++.+++++|.++.+++..+.+......+.+-+.+...||+. +.....+..+.+++|...+|.+.||...-+..
T Consensus 256 ~~si~~~~~n~~F~il~~~ygi~~g~F~~l~~~l~~~l~~sgY~~~~aG~ig~l~iv~Gmlga~~~gii~Dktk~fk~~- 334 (480)
T KOG2563|consen 256 PKSIKSCFKNRQFIILAICYGIGLGLFNSLSTLLNLALCPSGYEGVFAGYIGALMIVAGMLGALASGIIADKTKKFKLT- 334 (480)
T ss_pred HHHHHHHHcCccHHHHHHHHhhhHHHHHHHHHHhhhccccccCCccccchhHHHHHHHHHHHHHHHHhhhhhhhhHHHH-
Confidence 345777999999999998888777777666666655556678874 44477788899999999999999999643322
Q ss_pred hhHHHHHHHHHHHHH-HHHHH-h---chhHHHHHHHHHHHHHhhhhHhHHHHHHHHhhCcchhhHHHHHHHHHHHHHHHH
Q 014462 262 RPVAMAVAQVVMAFA-LLYYA-I---GWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLI 336 (424)
Q Consensus 262 r~~~l~~~~~~~~~~-~ll~~-~---~~~~~l~~~~~l~G~~~G~~~~~~~~~~se~fg~~~~g~~~g~~~~~~~lgs~l 336 (424)
. .+......++ +.++. . ...+.++....+.|++.-+..++-.-...|.-.+..=|+..|++++.+++-+.+
T Consensus 335 ---~-~v~~~~~~v~~~~l~~~t~~~~~~viv~~t~~~~g~~~~~~~Pig~ElgvE~TyPv~E~tSsGll~~~gq~f~~~ 410 (480)
T KOG2563|consen 335 ---T-LVLYLFALVGTLMLLTCTLFLGDSVIVFTTCGLLGFFGTGYLPIGFELGVETTYPVAEGTSSGLLNLSGQIFGVI 410 (480)
T ss_pred ---H-HHHHHHHHHHHHHHHHhhccCCceEehhhhHHHHHHhhcCCCCcceeeeeeeccccCCcccceeEEeehhHHHHH
Confidence 1 1111112222 11111 1 123456667778888877887777777777654555588999999988888877
Q ss_pred HHHHHHHHHHhhhh
Q 014462 337 FSGVIASGIYDYYA 350 (424)
Q Consensus 337 ~~~~l~g~l~d~~~ 350 (424)
+ ..+.+...+..+
T Consensus 411 ~-~~~~~~~~~~~~ 423 (480)
T KOG2563|consen 411 L-VFIMGILAEDLG 423 (480)
T ss_pred H-HHHHHHHhhccC
Confidence 5 677776555443
No 227
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=97.79 E-value=0.00074 Score=68.06 Aligned_cols=128 Identities=16% Similarity=0.086 Sum_probs=88.1
Q ss_pred HHHcCCCchhH--HHHHHHHHhhhhhhhhhhhhhhhhhcccCchhHHHHHHHHHHHHH-------HHHHHh-------ch
Q 014462 221 CQSLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVMAFA-------LLYYAI-------GW 284 (424)
Q Consensus 221 ~~~~g~s~~~~--~~sl~si~~~~gr~~~G~lsd~~g~k~~~~r~~~l~~~~~~~~~~-------~ll~~~-------~~ 284 (424)
..+++.+..-. ++++..+... .|+..|+.||+.+.-..+.|+-++..+.++.+.+ .+.+.. ..
T Consensus 7 IvEL~vpA~lv~~lval~~~~ap-~R~~~G~~SD~~~s~~G~rRtPyI~~G~~~~~~g~~~ap~a~~~l~~~~~~~~~~~ 85 (403)
T PF03209_consen 7 IVELGVPAWLVALLVALHYLVAP-LRVWFGHRSDTHPSILGWRRTPYIWGGTLLQAGGLAIAPFALLLLAESGQQSSGPF 85 (403)
T ss_pred HHHhccHHHHHHHHHHHHHHHHH-HHHHhccccccCcccCcCCchhhhHHHHHHHHHHHHHHHHHHHHHccccccccccc
Confidence 35566665422 4555544444 5999999999998222222332334444443333 222222 11
Q ss_pred -h--HHHHHHHHHHHHHhhhhHhHHHHHHHHhhCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh
Q 014462 285 -P--GEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIASGIYDYYA 350 (424)
Q Consensus 285 -~--~~l~~~~~l~G~~~G~~~~~~~~~~se~fg~~~~g~~~g~~~~~~~lgs~l~~~~l~g~l~d~~~ 350 (424)
. ....+...++|+|.+...+..-+.++|.-++++|++..+++....-+|.++ +..+.|.+.|.+.
T Consensus 86 ~~g~~~a~l~F~l~G~G~~~s~T~~lALl~D~~~e~~R~~~v~ivw~Mli~G~iv-~ai~~g~lL~~~s 153 (403)
T PF03209_consen 86 WLGLALAALAFLLYGLGVHASGTSFLALLADLAPEERRPRVVAIVWVMLIVGIIV-SAIVFGRLLDPFS 153 (403)
T ss_pred HHHHHHHHHHHHHHHhhHhHhHHHHHHHHHhcCCHhhhhhhHHHHHHHHHHHHHH-HHHHHHHHccccC
Confidence 1 234556788899999999999999999999999999999999999999998 8999998887765
No 228
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=97.77 E-value=0.0023 Score=59.75 Aligned_cols=127 Identities=17% Similarity=0.204 Sum_probs=89.0
Q ss_pred hcHHHHHHHcCCCc----hhHHHHHHHHHhhhhhhhhhhhhhhhhhcccCchhHHHHHHHHHHHHHHHHHH-hc--hhHH
Q 014462 215 DNLGQICQSLGYAD----TSIYVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVMAFALLYYA-IG--WPGE 287 (424)
Q Consensus 215 ~~l~~i~~~~g~s~----~~~~~sl~si~~~~gr~~~G~lsd~~g~k~~~~r~~~l~~~~~~~~~~~ll~~-~~--~~~~ 287 (424)
...+.+..+.+.+. .....+...+...++.+..|.++||+|||+.. ..+.....++.++.. .. ....
T Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~ 96 (338)
T COG0477 23 PALPLLLSTLSLSSGRLLYGLLLSAFFLGYAIGSLLAGPLGDRYGRRKVL------IIGLLLFLLGTLLLALAPNVGLAL 96 (338)
T ss_pred HHHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHhhhhhhccccccchHHH------HHHHHHHHHHHHHHHhCccchHHH
Confidence 34556666665554 23477888888888889999999999887322 222222223322222 22 2456
Q ss_pred HHHHHHHHHHHhhhhHhHHHHHHHHhhCc-chhhHHHHHHHH-HHHHHHHHHHHHHHHHHHhh
Q 014462 288 IYVTTVLVGLSYGAHWAIVPAAASELFGL-KSFGALYNFLTL-ASPAGSLIFSGVIASGIYDY 348 (424)
Q Consensus 288 l~~~~~l~G~~~G~~~~~~~~~~se~fg~-~~~g~~~g~~~~-~~~lgs~l~~~~l~g~l~d~ 348 (424)
+.+.....|++.|...+...+++++.++. ++++...+.... ...+|..+ ++.+.+.+.+.
T Consensus 97 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 158 (338)
T COG0477 97 LLILRLLQGLGGGGLLPVASALLSEWFPEATERGLAVGLVTLGAGALGLAL-GPLLAGLLLGA 158 (338)
T ss_pred HHHHHHHHHhhhHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHH
Confidence 66677778999999999999999999987 678999998888 46777776 78777777766
No 229
>PRK03612 spermidine synthase; Provisional
Probab=97.64 E-value=0.0058 Score=64.56 Aligned_cols=144 Identities=19% Similarity=0.221 Sum_probs=74.1
Q ss_pred HHHHhhhhHHHHHhcHHHHHH-HcCCCchhH--HHHHHHHHhhhhhhhhhhhhhhhhhcccCchhHHHHHHHHHHHHHHH
Q 014462 202 SLVLASGSGLTVIDNLGQICQ-SLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVMAFALL 278 (424)
Q Consensus 202 ~~~~~~~~~~~~~~~l~~i~~-~~g~s~~~~--~~sl~si~~~~gr~~~G~lsd~~g~k~~~~r~~~l~~~~~~~~~~~l 278 (424)
..|+..++++.+-..+..++. -+|.+..++ +++.+..+..+|..++|++.++..++... +-+.++++......+
T Consensus 22 ~~f~sg~~~L~yEv~~~r~l~~~~G~s~~~~~~ii~~fl~glalGs~l~~~~~~~~~~~~~~---~e~~i~l~~~~~~~l 98 (521)
T PRK03612 22 AVFVCAACGLVYELLLGTLASYLLGDSVTQFSTVIGLMLFAMGVGALLSKYLLRDAAAGFVA---VELLLALLGGLSALI 98 (521)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHH---HHHHHHHHHHHHHHH
Confidence 333444455554433333333 357665433 77777788888888877765322221110 000111111111111
Q ss_pred HHH-hc----hhHHHHHHHHHHHHHhhhhHhHHHHHHHHhhCcchhhHHHHHHHHHHHHHHHHHHHHHHH-HHHhhhh
Q 014462 279 YYA-IG----WPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIAS-GIYDYYA 350 (424)
Q Consensus 279 l~~-~~----~~~~l~~~~~l~G~~~G~~~~~~~~~~se~fg~~~~g~~~g~~~~~~~lgs~l~~~~l~g-~l~d~~~ 350 (424)
+.. .. ....++...++.++..|+..++..-+..+.. .++.|...|-++....+|+++ |..+.| .++...|
T Consensus 99 l~~~~~~~~~~~~~~~~~~~~~~~l~G~~~Pl~~~~~~~~~-~~~~g~~~g~ly~~ntlGa~~-G~l~~~~vLlp~lG 174 (521)
T PRK03612 99 LYAAFAFQGLSRLLLYVLVLLIGLLIGMEIPLLMRILQRIR-DQHLGHNVATVLAADYLGALV-GGLAFPFLLLPRLG 174 (521)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-ccchhhhhhhhHhHHhHHHHH-HHHHHHHHHHHhcc
Confidence 111 11 1122344556678888888776666555433 234566677777778888886 788888 4455565
No 230
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=97.60 E-value=6.1e-05 Score=72.04 Aligned_cols=152 Identities=16% Similarity=0.089 Sum_probs=109.5
Q ss_pred hHHHHHHHHHHHHhhhhHHHHHhcHH-HHHHHcCCCc--hh--HHHHHHHHHhhhhhhhhhhhhhhhhhcccCchhHHHH
Q 014462 193 KADFLLLFFSLVLASGSGLTVIDNLG-QICQSLGYAD--TS--IYVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMA 267 (424)
Q Consensus 193 ~~~fwll~~~~~~~~~~~~~~~~~l~-~i~~~~g~s~--~~--~~~sl~si~~~~gr~~~G~lsd~~g~k~~~~r~~~l~ 267 (424)
.++|..+.++.+.+.++.+.+.+--. |+.-.++.+. ++ .+-+.+|--|.+-...+|++.||.-.-|.. -.
T Consensus 40 ~hr~m~lv~mc~lgfgsyfcyd~p~alq~~fk~d~ni~~akftLlYsvYSwPNvVlcffgGflidr~fgir~g-----ti 114 (459)
T KOG4686|consen 40 GHRFMALVFMCLLGFGSYFCYDAPGALQIDFKLDSNIEYAKFTLLYSVYSWPNVVLCFFGGFLIDRRFGIRLG-----TI 114 (459)
T ss_pred hhHHHHHHHHHHhcccceeecCCchhhhhhhhcccccceeeeeeeeeeccCCCEEEeeecceeehhhhhhhHH-----HH
Confidence 44667777777777777766643211 2222233332 22 277888899999999999999987432221 12
Q ss_pred HHHHHHHHHHHHHHh----chhHHHHHHHHHHHHHhhhhHhHHHHHHHHhhCcchhhHHHHHHHHHHHHHHHHHHHHHHH
Q 014462 268 VAQVVMAFALLYYAI----GWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIAS 343 (424)
Q Consensus 268 ~~~~~~~~~~ll~~~----~~~~~l~~~~~l~G~~~G~~~~~~~~~~se~fg~~~~g~~~g~~~~~~~lgs~l~~~~l~g 343 (424)
+.+++..++++.++. +..|.+..+.++.|+|--........++..+|.-|+.+..+|+......+|+.+ +-.+.+
T Consensus 115 i~~~fv~~GqliFa~Ggi~~aFw~M~~GRF~FGIGgESlAVaQN~yav~wFKGKELn~vfGlqlSvAR~Gstv-Nf~lm~ 193 (459)
T KOG4686|consen 115 ILCIFVFLGQLIFAAGGISHAFWTMLAGRFLFGIGGESLAVAQNKYAVYWFKGKELNFVFGLQLSVARLGSTV-NFLLMP 193 (459)
T ss_pred HHHHHHHHHHHHHHhchHHHHHHHHHhhheeeccCchhhhhhhcceeEEEecCccccchhhHHHHHHHhhcee-eeeecH
Confidence 334455667776652 345778889999999876666777889999999999999999999999999998 888899
Q ss_pred HHHhhhh
Q 014462 344 GIYDYYA 350 (424)
Q Consensus 344 ~l~d~~~ 350 (424)
++||.-+
T Consensus 194 ~ly~~~~ 200 (459)
T KOG4686|consen 194 FLYDTMG 200 (459)
T ss_pred HHHHHHH
Confidence 9999876
No 231
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=97.58 E-value=0.0006 Score=70.74 Aligned_cols=131 Identities=14% Similarity=0.169 Sum_probs=96.5
Q ss_pred HHHHHhhhhhhhhhhhhhhhhhcccCchhHHHHHHHHHHHHHHHHHHhchhHHHHHHHHHHHH--HhhhhHhHHHHHHHH
Q 014462 235 MISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVMAFALLYYAIGWPGEIYVTTVLVGL--SYGAHWAIVPAAASE 312 (424)
Q Consensus 235 l~si~~~~gr~~~G~lsd~~g~k~~~~r~~~l~~~~~~~~~~~ll~~~~~~~~l~~~~~l~G~--~~G~~~~~~~~~~se 312 (424)
..++..++-.+..|.++|++|||... .+......+..++..+.. +++++ +.|+ ++++.++...+++++
T Consensus 70 ~~~~~~~i~s~~iG~lSD~~grk~~L------~~~~~~~~l~~~~~~~~~-~~~~~---~~~l~g~~~~~~s~~~a~vad 139 (463)
T KOG2816|consen 70 TAGLLTLISSPLIGALSDRYGRKVVL------LLPLFGTILPALCLLFQG-YWFFL---LLGLSGGFSAIFSVGFAYVAD 139 (463)
T ss_pred hhHHHHHHHHhhhHHhhhhhhhhhhH------HHHHHHHHHhHHHHHHHH-HHHhh---hcccccchhhhhhhhhhheee
Confidence 34677888899999999999998654 333333333333333333 22222 4444 356777888899999
Q ss_pred hhCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhccCCCCCcccCCCCCCcccCCcchHHHHHHHHH
Q 014462 313 LFGLKSFGALYNFLTLASPAGSLIFSGVIASGIYDYYAEKQAGLLWKYNGNMLPVSFRDQETPTCLGSICYSITCGIMAG 392 (424)
Q Consensus 313 ~fg~~~~g~~~g~~~~~~~lgs~l~~~~l~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~g~~c~~~~f~i~a~ 392 (424)
.-..++|...+|+++....++..+ +|.+.+.+....+ +..+|.+.++
T Consensus 140 is~~~~R~~~~gll~~~~~~~~~~-~p~~~~~~~~~~~--------------------------------~a~~f~ia~~ 186 (463)
T KOG2816|consen 140 ISSEEERSSSIGLLSGTFGAGLVI-GPALGGYLVKFLG--------------------------------IALVFLIAAA 186 (463)
T ss_pred ccchhHHHHHHHHHHHHHHHHHhH-HHHHHHHHHHhcC--------------------------------chHHHHHHHH
Confidence 999999999999999988888887 8999998877765 8889999999
Q ss_pred HHHHHHHHHHHHhhhh
Q 014462 393 LCIIAMVMSLIVVHRT 408 (424)
Q Consensus 393 ~~~~~~~l~~~l~~~~ 408 (424)
..+++.+-..+..+++
T Consensus 187 ~~~~~~~y~~~~l~Es 202 (463)
T KOG2816|consen 187 SGILSLLYMLLFLPES 202 (463)
T ss_pred HHHHHHHHHhhccccc
Confidence 8888877776666554
No 232
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=97.54 E-value=0.0021 Score=66.33 Aligned_cols=155 Identities=20% Similarity=0.216 Sum_probs=102.3
Q ss_pred HHHHHHcCCCchhH--HHHHHHHHhhhhhhhhhhhhhhhhhcccCchhHHHHHHHHHHHHHHHHHHh-----chhHHHHH
Q 014462 218 GQICQSLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVMAFALLYYAI-----GWPGEIYV 290 (424)
Q Consensus 218 ~~i~~~~g~s~~~~--~~sl~si~~~~gr~~~G~lsd~~g~k~~~~r~~~l~~~~~~~~~~~ll~~~-----~~~~~l~~ 290 (424)
+.+-+++|.++++. +.++.++... ..++.|.++|.+-- .++.|+..+.++.++.+++.+.++. .+.....+
T Consensus 14 ~~l~~~l~ls~~~~~~~~~~~~lPw~-~Kp~~g~lsD~~pi-~G~rr~~Y~~i~~~~~~~~~~~~~~~~~~~~s~~~~~~ 91 (433)
T PF03092_consen 14 PFLKDDLGLSPAQLQRLSSLASLPWS-IKPLYGLLSDSFPI-FGYRRKPYMIIGWLLGAVSALVLALLPASESSAAIAVV 91 (433)
T ss_pred HHHHHHcCCCHHHHHHHHHHHhCchH-HhhhHHhhcccccc-cCCcchHHHHHHHHHHHHHHHHHHhcccccchhhhHHH
Confidence 34446699998754 5555555444 48999999998831 1112222344555444333333331 12334455
Q ss_pred HHHHHHHHhhhhHhHHHHHHHHhhCc--chhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhccCCCCCcc
Q 014462 291 TTVLVGLSYGAHWAIVPAAASELFGL--KSFGALYNFLTLASPAGSLIFSGVIASGIYDYYAEKQAGLLWKYNGNMLPVS 368 (424)
Q Consensus 291 ~~~l~G~~~G~~~~~~~~~~se~fg~--~~~g~~~g~~~~~~~lgs~l~~~~l~g~l~d~~~~~~~~~~~~~~~~~~~~~ 368 (424)
..++..+|+...-.+.-+.+.|.-.. +.+|...+.......+|+++ +..+.|.+.+..+
T Consensus 92 ~l~la~~g~a~~DV~aDa~vvE~~~~~p~~~g~lqS~~~~~~~~G~lv-~~~l~G~l~~~~~------------------ 152 (433)
T PF03092_consen 92 LLFLASFGYAFADVAADALVVELARREPESRGDLQSFVWGVRSVGSLV-GSLLSGPLLDSFG------------------ 152 (433)
T ss_pred HHHHHHHHHHHHHHhhhHHHHHHhhcCCchhHHHHHHHHHHHHHHHHH-HHHhhhhhhhcCC------------------
Confidence 66677788888887888888888632 23788899999999999997 8889999888766
Q ss_pred cCCCCCCcccCCcchHHHHHHHHHHHHHHHHHHHHHhhh
Q 014462 369 FRDQETPTCLGSICYSITCGIMAGLCIIAMVMSLIVVHR 407 (424)
Q Consensus 369 ~~~~~~~~c~g~~c~~~~f~i~a~~~~~~~~l~~~l~~~ 407 (424)
++..|.+.+.+.++..+.++.+..+
T Consensus 153 --------------~~~~f~i~~~~~~l~~~~~~~~~~e 177 (433)
T PF03092_consen 153 --------------PQGVFLISAALPLLMLIVALFLLEE 177 (433)
T ss_pred --------------CeEEehHHHHHHHHHHHHHHHhhhh
Confidence 5666777777777776666666554
No 233
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=97.45 E-value=0.005 Score=54.37 Aligned_cols=107 Identities=7% Similarity=0.062 Sum_probs=77.0
Q ss_pred HHHHHHHhhhhhhhhhhhhhhhhhcccCchhHHHHHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHhhhhHhHHHHHHHH
Q 014462 233 VSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVMAFALLYYAIGWPGEIYVTTVLVGLSYGAHWAIVPAAASE 312 (424)
Q Consensus 233 ~sl~si~~~~gr~~~G~lsd~~g~k~~~~r~~~l~~~~~~~~~~~ll~~~~~~~~l~~~~~l~G~~~G~~~~~~~~~~se 312 (424)
.++......+..+.++.+.+++|.|+.+ .++.+..++-...+...+.+.++.+.++.|++.+..|+....++.+
T Consensus 43 lai~Y~~~~~s~l~~P~iv~~lg~K~sm------~lg~~~y~~y~~~~~~~~~~~l~~~s~l~G~~~a~lW~aqg~ylt~ 116 (156)
T PF05978_consen 43 LAILYGSFAISCLFAPSIVNKLGPKWSM------ILGSLGYAIYIASFFYPNSYTLYPASALLGFGAALLWTAQGTYLTS 116 (156)
T ss_pred HHHHHHHHHHHHHhHHHHHHHHhhHHHH------HHHHHHHHHHHHHHHhhhHHHHHHHHHHHhhhhHHhhHhhhHHHHH
Confidence 3344444555556677888999988644 5555554433333334556778999999999999999999999999
Q ss_pred hhCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 014462 313 LFGLKSFGALYNFLTLASPAGSLIFSGVIASGIY 346 (424)
Q Consensus 313 ~fg~~~~g~~~g~~~~~~~lgs~l~~~~l~g~l~ 346 (424)
.-.++++++..++.......+.++ |..+.-.++
T Consensus 117 ~s~~~~~~~~~~ifw~i~~~s~i~-G~~~~~~~~ 149 (156)
T PF05978_consen 117 YSTEETIGRNTGIFWAIFQSSLIF-GNLFLFFIF 149 (156)
T ss_pred cCCHHHHhhHHHHHHHHHHHHHHH-HHHHHHHHH
Confidence 998889999999988888876665 655444443
No 234
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=97.42 E-value=0.034 Score=58.34 Aligned_cols=117 Identities=15% Similarity=0.099 Sum_probs=85.4
Q ss_pred CCCc-hhHHHHHHHHHhhhhhhhhhhhhhhhhhcc---cCchhHHHHHHHHHHHHHHHHHHh----------chhHHHHH
Q 014462 225 GYAD-TSIYVSMISIWNFLGRVGGGYFSEAIVRKF---AYPRPVAMAVAQVVMAFALLYYAI----------GWPGEIYV 290 (424)
Q Consensus 225 g~s~-~~~~~sl~si~~~~gr~~~G~lsd~~g~k~---~~~r~~~l~~~~~~~~~~~ll~~~----------~~~~~l~~ 290 (424)
|++- ++++.++..++-.+..|+.+++-.+..+|+ ..|++ +.+++++++++++.+.. .+++++.+
T Consensus 305 g~~ip~~~~qslNp~~ii~l~P~~a~lw~~l~~~~~~~s~~~K--fa~g~~~~g~~f~~l~~~~~~~~~~~~~s~~wl~~ 382 (493)
T PRK15462 305 GYTVPTAMFQSINAFAVMLCGVFLAWVVKESVAGNRTVRIWGK--FALGLGLMSAGFCILTLSARWSAMYGHSSLPLMVL 382 (493)
T ss_pred ceeeCHHHHHhHhHHHHHHHHHHHHHHHHHHhcCCCCCCcHHH--HHHHHHHHHHHHHHHHHHHhhcCCCCCcCHHHHHH
Confidence 4443 455889999999999999888877775432 23333 35666777777655421 23567788
Q ss_pred HHHHHHHHhhhhHhHHHHHHHHhhCcchhhHHHHHHHHHH-HHHHHHHHHHHHHH
Q 014462 291 TTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLAS-PAGSLIFSGVIASG 344 (424)
Q Consensus 291 ~~~l~G~~~G~~~~~~~~~~se~fg~~~~g~~~g~~~~~~-~lgs~l~~~~l~g~ 344 (424)
..++.++|--...++..+.++++.|.+.+|...|...+.. .+|..+ +..+++.
T Consensus 383 ~~~~~t~gEl~~sPvgls~~~~laP~~~~g~~mg~w~l~~~~~~~~~-~g~~~~~ 436 (493)
T PRK15462 383 GLAVMGFAELFIDPVAMSQITRIEIPGVTGVLTGIYMLLSGAIANYL-AGVIADQ 436 (493)
T ss_pred HHHHHHHHHHHHChHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHH-HHHHHHH
Confidence 8888999998999999999999999999999999987643 566665 5555553
No 235
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=97.26 E-value=0.007 Score=60.31 Aligned_cols=141 Identities=13% Similarity=0.095 Sum_probs=94.1
Q ss_pred cCCCchhH--HHHHHHHHhhhhhhhhhhhhhhhhhcccCchhHHHHHHHHHHHHHHHHHH-hchhHHHHHHHHHHHHHhh
Q 014462 224 LGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVMAFALLYYA-IGWPGEIYVTTVLVGLSYG 300 (424)
Q Consensus 224 ~g~s~~~~--~~sl~si~~~~gr~~~G~lsd~~g~k~~~~r~~~l~~~~~~~~~~~ll~~-~~~~~~l~~~~~l~G~~~G 300 (424)
-|.+..+. ++.-...+..+|...+|.++|++|||+.. .+...+..+...+-. ..+...+++...+.|+|.|
T Consensus 108 w~~s~~q~~llt~~v~~gmllga~~w~l~~d~~grr~~f------~~T~l~t~v~~~is~~spnf~~L~~f~~l~~~g~g 181 (528)
T KOG0253|consen 108 WGPSEGQAPLLTLSVFLGMLVGAMVWGLSADTIGRRKGF------NLTFLVTGVFGVISGASPNFASLCVFRALWGFGVG 181 (528)
T ss_pred hchhhhhhhHHHHHHHhhhhhhhhhhheehhhhhcchhh------hhhHHHHHHHHHhhcCCCCeehhhHHHHHHhccCC
Confidence 35444332 66666778889999999999999999876 333333333333322 3445678889999999999
Q ss_pred hhHhHHHHHHHHhhCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhccCCCCCcccCCCCCCcccCC
Q 014462 301 AHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIASGIYDYYAEKQAGLLWKYNGNMLPVSFRDQETPTCLGS 380 (424)
Q Consensus 301 ~~~~~~~~~~se~fg~~~~g~~~g~~~~~~~lgs~l~~~~l~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~g~ 380 (424)
+ .+...++-.|.-|..+++.-.=.. ....+|... ...++=.+..+.|
T Consensus 182 g-~pv~~~~yle~lp~~~r~~~~V~~-~~waig~v~-ea~law~vm~~~g------------------------------ 228 (528)
T KOG0253|consen 182 G-LPVDSAIYLEFLPSSHRWLLTVMS-FFWAIGQVF-EALLAWGVMSNFG------------------------------ 228 (528)
T ss_pred C-ccHhHHHHHHhccCcCCCcchhHH-HHHHHHHHH-HHHHHHHHHHhhh------------------------------
Confidence 9 677777778888888877655444 777788775 5554444455555
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHHh
Q 014462 381 ICYSITCGIMAGLCIIAMVMSLIVV 405 (424)
Q Consensus 381 ~c~~~~f~i~a~~~~~~~~l~~~l~ 405 (424)
||+-+........+.+....++.
T Consensus 229 --wr~~l~~~~~pl~~~a~f~~w~~ 251 (528)
T KOG0253|consen 229 --WRYLLFTSSTPLMFAARFLVWVY 251 (528)
T ss_pred --HHHHHHHHHhHHHHHHHHHhhcc
Confidence 88877766655555555555443
No 236
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=97.03 E-value=0.008 Score=62.36 Aligned_cols=185 Identities=17% Similarity=0.140 Sum_probs=117.4
Q ss_pred HHHHHHHHHhhhhHHHHHhcHHHHHHHc--CCCch--hHHHHHHHHHhhhhhhhhhhhhhhhhh-cccCchhHHHHHHHH
Q 014462 197 LLLFFSLVLASGSGLTVIDNLGQICQSL--GYADT--SIYVSMISIWNFLGRVGGGYFSEAIVR-KFAYPRPVAMAVAQV 271 (424)
Q Consensus 197 wll~~~~~~~~~~~~~~~~~l~~i~~~~--g~s~~--~~~~sl~si~~~~gr~~~G~lsd~~g~-k~~~~r~~~l~~~~~ 271 (424)
|+..+..+........+..-+-++.+++ +-+.+ .+.++..+++.+++.+..|+-+.|.+. |+.+ .++.+
T Consensus 37 ~l~~~~sfl~~v~~sI~~~s~wpYl~~lD~~A~~~ffG~viaa~slg~~i~~liF~~Ws~k~~~~k~Pl------i~s~i 110 (488)
T KOG2325|consen 37 YLALLNSFLVAVQFSIYLTSMWPYLQKLDPTATATFFGLVIAASSLGHAIFSLIFGIWSNKTGSVKKPL------IVSFL 110 (488)
T ss_pred HHHHHHHHHHhhhheEEEeecchhhhhcCCCCCcchhhHHHHHHHHHHHhcchhhcccccccCCcccCH------HHHHH
Confidence 4444444433322222222334566664 33333 348888999999999999999998885 3333 56778
Q ss_pred HHHHHHHHHH-h----c-hhHHHHHHHHHHHHHhhhhHhHHHHHHHHhhCcchhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 014462 272 VMAFALLYYA-I----G-WPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIASGI 345 (424)
Q Consensus 272 ~~~~~~ll~~-~----~-~~~~l~~~~~l~G~~~G~~~~~~~~~~se~fg~~~~g~~~g~~~~~~~lgs~l~~~~l~g~l 345 (424)
++++++++++ . . ..+.+.++.++.|+|.|... ..=.++++.--.++|-+++...+.+..+|..+ ||.+...+
T Consensus 111 i~~~g~llY~~l~~~~~~~~y~mL~~R~l~Gvg~~n~a-~lR~Y~a~~s~~~dR~rA~a~~~~~~vlg~il-Gp~~q~~f 188 (488)
T KOG2325|consen 111 IAIIGNLLYLALAYVPNGVKYLMLVARILTGVGVGNFA-VLRAYIADASTVEDRPRAFAATSGGFVLGIIL-GPTIQLAF 188 (488)
T ss_pred HHHHHHHHHHHHHhcccchHHHHHHHHHHcCcCcccHH-HHHHHHHhccCccchHHHHHHhhhHHHHHHHH-hHHHHHHH
Confidence 8888888773 1 2 34578889999999987764 66777877666788888888888877787776 77554332
Q ss_pred HhhhhhhhhhhhhhccCCCCCcccCCCCCCcccCCcchHHHHHHHHHHHHHHHHHHHHHhhhh
Q 014462 346 YDYYAEKQAGLLWKYNGNMLPVSFRDQETPTCLGSICYSITCGIMAGLCIIAMVMSLIVVHRT 408 (424)
Q Consensus 346 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~g~~c~~~~f~i~a~~~~~~~~l~~~l~~~~ 408 (424)
.--+.+.- . +.+. .--+=|..+=++++.++++.+++..+..++.
T Consensus 189 -~~Lg~~G~----~----i~~~----------~~~n~YTap~w~m~i~~i~~~v~i~~~f~E~ 232 (488)
T KOG2325|consen 189 -TPLGEKGF----M----ILPG----------LIFNMYTAPAWLMAILWIIYIVIILFFFKEV 232 (488)
T ss_pred -hhhcCCce----E----EcCc----------ceEEecchHHHHHHHHHHHHHHHHHhheeec
Confidence 22221100 0 0000 0011278888899999998887777666544
No 237
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=96.96 E-value=0.001 Score=67.85 Aligned_cols=159 Identities=17% Similarity=0.113 Sum_probs=93.6
Q ss_pred hhhhHHHHHHHHHHHHhhhhHHHHHhcHHHHHH----HcCCCc--hhHHHHHHHHHhhhhhhhhhhhhhhhhhcccCchh
Q 014462 190 ALMKADFLLLFFSLVLASGSGLTVIDNLGQICQ----SLGYAD--TSIYVSMISIWNFLGRVGGGYFSEAIVRKFAYPRP 263 (424)
Q Consensus 190 ~l~~~~fwll~~~~~~~~~~~~~~~~~l~~i~~----~~g~s~--~~~~~sl~si~~~~gr~~~G~lsd~~g~k~~~~r~ 263 (424)
+.+++.+.+..+.+....+..-++..|.|.+.+ -.|.+. +.++..+...++.+|.+.+|.++|++.++. ||-
T Consensus 240 l~~~~v~v~~sl~~~a~~fv~Gs~sww~p~~~~~~~~~~~~~~~~~~ifg~vt~~~G~lGvl~Ggiisd~~~~~~--~~~ 317 (493)
T KOG1330|consen 240 LAKIKVFVLSSLGIIAAQFVIGSLSWWAPAFIYYSYELIGFDHNATLIFGGVTCAGGSLGVLFGGIISDKLSRIF--PNS 317 (493)
T ss_pred HHccCceeeehHHHHHHHHhccccchhhhhHHHHHHHHhCCccccchhhhhHHHhhchhhheehHHHHHHHHHhc--ccc
Confidence 444454444444444444433344555555542 235443 234888999999999999999999987633 221
Q ss_pred HHHHHHH------HHHHHHHHHHH-hchhHHHH--HHHHHHHHH-hhhhHhHHHHHHHHhhCcchhhHHHHHHHHHHHHH
Q 014462 264 VAMAVAQ------VVMAFALLYYA-IGWPGEIY--VTTVLVGLS-YGAHWAIVPAAASELFGLKSFGALYNFLTLASPAG 333 (424)
Q Consensus 264 ~~l~~~~------~~~~~~~ll~~-~~~~~~l~--~~~~l~G~~-~G~~~~~~~~~~se~fg~~~~g~~~g~~~~~~~lg 333 (424)
.-..+.+ +..++.++.+. ......++ +..+++|.. .-..|++..-+..|+.|+++|.+++.+-.+...+-
T Consensus 318 ~~~~~~q~~~~~g~~~s~~~L~~~~~~~~~s~~~~~il~~~g~~~~~~~~a~n~~i~l~vV~p~~Rt~a~a~~~~~~h~f 397 (493)
T KOG1330|consen 318 GTLRASQLSAALGAPLSIPFLFLFPAFTSSSMIFGLILFLVGETISWFNWATNNPIFLEVVPPSRRTTAYALDTVFEHIF 397 (493)
T ss_pred cchhHHHHHHhhhhhHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHhcccccccceeeEecCcccccHHHHHHHHHHHHh
Confidence 1111111 22222222222 11122233 344444543 34566778888899999999999999988766554
Q ss_pred HHHHHHHHHHHHHhhhh
Q 014462 334 SLIFSGVIASGIYDYYA 350 (424)
Q Consensus 334 s~l~~~~l~g~l~d~~~ 350 (424)
+-.-+|++.|.+.|+--
T Consensus 398 gd~~~p~ivGilsd~l~ 414 (493)
T KOG1330|consen 398 GDAASPYIVGILSDKLR 414 (493)
T ss_pred ccCCCcceehhHHHHhh
Confidence 44436779999998853
No 238
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=96.91 E-value=0.0051 Score=61.93 Aligned_cols=105 Identities=16% Similarity=0.237 Sum_probs=83.6
Q ss_pred HHHHHHHHHHHHHHH--h-ch-------hHHHHHHHHHHHHHhhhhHhHHHHHHHHhhCcc---hhhHHHHHHHHHHHHH
Q 014462 267 AVAQVVMAFALLYYA--I-GW-------PGEIYVTTVLVGLSYGAHWAIVPAAASELFGLK---SFGALYNFLTLASPAG 333 (424)
Q Consensus 267 ~~~~~~~~~~~ll~~--~-~~-------~~~l~~~~~l~G~~~G~~~~~~~~~~se~fg~~---~~g~~~g~~~~~~~lg 333 (424)
.++.+++.+|++++. . .. ...++++..++++|.|+.=+...+...+.|..+ ++...++....+..+|
T Consensus 5 ~~g~~~~~~G~~ll~l~~~~~~~~~~~~~~~~~~gL~lia~G~G~~K~ni~~~~~dq~~~~~~~~~~~~F~~fY~~in~G 84 (372)
T PF00854_consen 5 LLGSIVYLLGHVLLTLSAIPPSLPSGIQLGLFYIGLALIAVGTGGIKPNISPFGADQYDEDDDSRRDSFFNWFYWGINIG 84 (372)
T ss_dssp HHHHHHHHHHHHH--HHHTSSSC------CHHHHHHHHHHHHHHCCHHHHHHHHHHCSSTTTTTHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHhHHHHhcchhhhhHHHHHHHHHHHHHHhccccccccHHHHHHHHhcccchhhhhhhHHHHHHHHhhh
Confidence 566777778877732 2 11 246899999999999999999999999999765 4778899999999999
Q ss_pred HHHHHHHHHHHHHhhhhhhhhhhhhhccCCCCCcccCCCCCCcccCCcchHHHHHHHHHHHHHHHHHHHHH
Q 014462 334 SLIFSGVIASGIYDYYAEKQAGLLWKYNGNMLPVSFRDQETPTCLGSICYSITCGIMAGLCIIAMVMSLIV 404 (424)
Q Consensus 334 s~l~~~~l~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~g~~c~~~~f~i~a~~~~~~~~l~~~l 404 (424)
+.+ +..+.+++-++.+ |...|.+.++..+++.+..+.-
T Consensus 85 ~~~-~~~~~~~i~~~~~--------------------------------~~~~f~i~~~~~~~~~~~f~~~ 122 (372)
T PF00854_consen 85 SLF-SPTLVPYIQQNYG--------------------------------WFLGFGIPAIGMLLALIVFLSG 122 (372)
T ss_dssp HHH-HHHCCCHHHHCS---------------------------------HHHHHHHHHHHHHHHHHHHHCC
T ss_pred hHh-hcccchhhccccc--------------------------------hhhhhhHHHHHHHHHHHHHHhC
Confidence 997 8888888887766 9999999999888877655443
No 239
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=96.87 E-value=0.078 Score=55.47 Aligned_cols=144 Identities=11% Similarity=0.001 Sum_probs=91.2
Q ss_pred HHHHHHHHhhhhhhhhhhhhhhhhhcccCchhHHHHHHHHHHHHHHHHHHh--chhH-HHHHHHHHHHHHhhhhHhHHHH
Q 014462 232 YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVMAFALLYYAI--GWPG-EIYVTTVLVGLSYGAHWAIVPA 308 (424)
Q Consensus 232 ~~sl~si~~~~gr~~~G~lsd~~g~k~~~~r~~~l~~~~~~~~~~~ll~~~--~~~~-~l~~~~~l~G~~~G~~~~~~~~ 308 (424)
..++..+..++-.|..|.++|+-++||.+ +.+...+.+++...+.+ ...+ ...+..++.-++++.......+
T Consensus 75 ~~sis~l~~all~P~lGa~aD~~~~Rk~~-----l~~~~~~~~~~~~~l~~v~~~~~~~~~~l~iia~v~~~~~~vfyna 149 (477)
T PF11700_consen 75 ANSISGLLQALLAPFLGAIADYGGRRKRF-----LLIFTLLGVLATALLWFVSPGQWWLALVLFIIANVGYEASNVFYNA 149 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHcccccchHH-----HHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 56677788888999999999999888754 22222222233333322 2223 2333344445688888899999
Q ss_pred HHHHhhCcchh--------------------------hHHHHHHHHHHHHHHHHHHHHHHH-HHHhhhhhhhhhhhhhcc
Q 014462 309 AASELFGLKSF--------------------------GALYNFLTLASPAGSLIFSGVIAS-GIYDYYAEKQAGLLWKYN 361 (424)
Q Consensus 309 ~~se~fg~~~~--------------------------g~~~g~~~~~~~lgs~l~~~~l~g-~l~d~~~~~~~~~~~~~~ 361 (424)
+..++-..++. ++..|.-...+.+|+.+. .+.. .+....+..
T Consensus 150 ~LP~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vS~~G~a~Gy~G~~v~--l~i~l~~~~~~~~~--------- 218 (477)
T PF11700_consen 150 YLPDLARPEPRVRAAREPSANGNISDSEYEAVDSLTRGRVSGLGWALGYIGGLVA--LLISLLLVISPGST--------- 218 (477)
T ss_pred HhHhhcCCChhhhhhhhhhccCCCChhhhhhHHHhhhchhHHHHHHHHHHHHHHH--HHHHHHHHHcCCCc---------
Confidence 99999998888 899999888899998872 3333 222222100
Q ss_pred CCCCCcccCCCCCCcccCCcchHHHHHHHHHHHHHHHHHHHHHhh
Q 014462 362 GNMLPVSFRDQETPTCLGSICYSITCGIMAGLCIIAMVMSLIVVH 406 (424)
Q Consensus 362 ~~~~~~~~~~~~~~~c~g~~c~~~~f~i~a~~~~~~~~l~~~l~~ 406 (424)
=.+.+..|.++.+.++-.++-.+..++..+
T Consensus 219 ---------------~~~~~~~r~~~~~~a~ww~vfsiP~~~~~~ 248 (477)
T PF11700_consen 219 ---------------ASNTWAIRVAFLIVALWWLVFSIPLFLWLP 248 (477)
T ss_pred ---------------cccchhhhHHHHHHHHHHHHHHHHHHHhCC
Confidence 001123789998888877665555544443
No 240
>PF12832 MFS_1_like: MFS_1 like family
Probab=96.70 E-value=0.0066 Score=46.95 Aligned_cols=58 Identities=12% Similarity=0.130 Sum_probs=45.8
Q ss_pred HHHhhhhHHHHHhcHHHHHHHcCCCchhH--HHHHHHHHhhhhhhhhhhhhhhhhhcccC
Q 014462 203 LVLASGSGLTVIDNLGQICQSLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAY 260 (424)
Q Consensus 203 ~~~~~~~~~~~~~~l~~i~~~~g~s~~~~--~~sl~si~~~~gr~~~G~lsd~~g~k~~~ 260 (424)
+|+..++.-.+...++.+.++.|++..++ +.++..+..+++.+++|+++||+++++..
T Consensus 9 yf~~f~~~g~~~Pfl~~~~~~~Gl~~~~iGil~~i~~~~~~~~~pl~g~laDk~~~~~~~ 68 (77)
T PF12832_consen 9 YFFYFAALGCLYPFLPLYLKQLGLSPSQIGILSAIRPLIRFLAPPLWGFLADKFGKRKVI 68 (77)
T ss_pred HHHHHHHHHHHHhhhhHhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCccHHH
Confidence 33344444455667888889999998776 88888899999999999999999987654
No 241
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=96.62 E-value=0.017 Score=56.85 Aligned_cols=64 Identities=5% Similarity=-0.052 Sum_probs=58.4
Q ss_pred hhHHHHHHHHHHHHHhhhhHhHHHHHHHHhhCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 014462 284 WPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIASGIYDY 348 (424)
Q Consensus 284 ~~~~l~~~~~l~G~~~G~~~~~~~~~~se~fg~~~~g~~~g~~~~~~~lgs~l~~~~l~g~l~d~ 348 (424)
+...+.+..++.|.|.+...+..+++++++.+.|+.++..|+......+|+.+ +|.+++.+..+
T Consensus 9 ~~~~~l~~~f~~g~G~~~lq~~~n~~v~~~~~~~~~~~~l~~~~~~~~~G~~~-gP~i~~~~i~~ 72 (310)
T TIGR01272 9 YYVLFLGALFVLASGLTILQVAANPYVSILGPIETAASRLALTQAFNKLGTTV-APLFGGSLILS 72 (310)
T ss_pred HHHHHHHHHHHHHhhHHHHHhhHHHHHHHHCCcchHHHHHHHHHHHhhhHHHH-HHHHHHHHHhc
Confidence 45667889999999999999999999999999999999999999999999997 99999977744
No 242
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=96.62 E-value=0.074 Score=55.00 Aligned_cols=103 Identities=13% Similarity=0.117 Sum_probs=65.7
Q ss_pred HHHHHHHHhhhhhhhhhhhhhhhhhcccCchhHHH-HHHHHHHHHHHHHHHh----------chhHHHHHHHHHHHHHhh
Q 014462 232 YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAM-AVAQVVMAFALLYYAI----------GWPGEIYVTTVLVGLSYG 300 (424)
Q Consensus 232 ~~sl~si~~~~gr~~~G~lsd~~g~k~~~~r~~~l-~~~~~~~~~~~ll~~~----------~~~~~l~~~~~l~G~~~G 300 (424)
...++.++.++||.+..+. ..-.+| +|.++. .++=++..-.+++... .+.+..++..++.|+.+|
T Consensus 312 ~~~~fNvgD~vGR~~~~~~-~~p~~~---~~~l~i~s~~R~iFIPlf~lcn~~~~~~~p~~~~~d~~~~~~~~l~gltnG 387 (437)
T TIGR00939 312 CFLLFNLFDWLGRSLTSKF-MWPDED---SRWLPILSFLRVLFIPLFLLCNYPQRSRLPVFFPGDAYFIILMLLFGFSNG 387 (437)
T ss_pred HHHHHHHHHHHHhhhhhee-EeeCCC---ccchHHHHHHHHHHHHHHHHhcCCccccCCeeecccHHHHHHHHHHHHhhh
Confidence 7778899999999977654 111122 111111 1111222111112111 234556678999999999
Q ss_pred hhHhHHHHHHHHhhCcchhhHHHHHHHHHHHHHHHHHHH
Q 014462 301 AHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSG 339 (424)
Q Consensus 301 ~~~~~~~~~~se~fg~~~~g~~~g~~~~~~~lgs~l~~~ 339 (424)
-..+....+..+....+++-.+-+++..+..+|-.+ |.
T Consensus 388 y~~s~~m~~~p~~v~~~e~e~aG~~~~~~l~~Gl~~-Gs 425 (437)
T TIGR00939 388 YLGSLSMCLAPRQVDPHEREVAGALMVIFLLVGLAL-GA 425 (437)
T ss_pred HHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHH-HH
Confidence 999999999999998888888888888777777665 44
No 243
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=96.38 E-value=0.16 Score=51.76 Aligned_cols=137 Identities=12% Similarity=0.125 Sum_probs=82.7
Q ss_pred HHHhhhhHHH--HHHHHHHHHhhhhHHHHHhcHHHHH-HHcCCC-ch----hHHHHHHHHHhhhhhhhhhhhhhhhhhcc
Q 014462 187 LPQALMKADF--LLLFFSLVLASGSGLTVIDNLGQIC-QSLGYA-DT----SIYVSMISIWNFLGRVGGGYFSEAIVRKF 258 (424)
Q Consensus 187 ~~~~l~~~~f--wll~~~~~~~~~~~~~~~~~l~~i~-~~~g~s-~~----~~~~sl~si~~~~gr~~~G~lsd~~g~k~ 258 (424)
+++..+++.. |.+++++ . .+++..+.|.-|.+ ++..-+ .. ...-+...+.++++.+..|++..++.+-.
T Consensus 240 ~~~~y~~~~ll~WSlWWa~--a-tcgy~qv~nYvQ~LW~~v~~~~~~~vYNG~VeA~~tllgA~~al~~g~v~~~w~~~~ 316 (412)
T PF01770_consen 240 FKSCYSNPRLLLWSLWWAF--A-TCGYYQVINYVQSLWDTVPPSDNESVYNGAVEAASTLLGAIAALLAGYVKVNWDRWG 316 (412)
T ss_pred HHHHhcCchHHHHHHHHHH--H-HhHHHHHHHHHHHHHHhcCCCCCCcccchHHHHHHHHHHHHHHHHHhHhhcchHHHH
Confidence 4445555543 5555443 2 23333333444443 444111 11 23556666777888888898855554322
Q ss_pred cCchhHHHHHHHHHHHHHHHHHH-hchhHHHHHHHHHHHHHhhhhHhHHHHHHHHhhCcchhhHHHHHHHHHH
Q 014462 259 AYPRPVAMAVAQVVMAFALLYYA-IGWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLAS 330 (424)
Q Consensus 259 ~~~r~~~l~~~~~~~~~~~ll~~-~~~~~~l~~~~~l~G~~~G~~~~~~~~~~se~fg~~~~g~~~g~~~~~~ 330 (424)
.+.+.+..++.+..++++. ..+.+..|++.++.+..+-...++...-++.....+.+|..+|+.++..
T Consensus 317 ----~l~l~~~S~l~a~~L~lm~~t~~Iwv~Y~~yIif~~~y~fliTiA~~qIA~~l~~e~yaLVFGiNtf~A 385 (412)
T PF01770_consen 317 ----ELALGVFSLLQAGLLFLMSFTGNIWVCYAGYIIFRSLYMFLITIASFQIAKNLSEERYALVFGINTFVA 385 (412)
T ss_pred ----HHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccceeeeeeeHHHHH
Confidence 1233444445454444444 4567788999999999888888888888888887888899888755544
No 244
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=96.36 E-value=0.00059 Score=72.29 Aligned_cols=166 Identities=14% Similarity=0.076 Sum_probs=0.0
Q ss_pred CCCHHHhhhhHHHHHHHHHHHHhhhhHHHHHhcHHHHHHH-cCCCchhH--HHHHHHH-Hhhhhhhhhhhhhhhhhhcc-
Q 014462 184 DFTLPQALMKADFLLLFFSLVLASGSGLTVIDNLGQICQS-LGYADTSI--YVSMISI-WNFLGRVGGGYFSEAIVRKF- 258 (424)
Q Consensus 184 ~~t~~~~l~~~~fwll~~~~~~~~~~~~~~~~~l~~i~~~-~g~s~~~~--~~sl~si-~~~~gr~~~G~lsd~~g~k~- 258 (424)
..+++++++|+.|....++..+......++...+|.+.|. ++.+++.+ ++....+ +.++|.+++|++..|+.-+.
T Consensus 295 ~~~l~~Ll~Np~f~~~~la~~~~~~~~~G~~tF~pKylE~QF~~sas~A~~l~G~v~ip~~~~G~llGG~ivkk~kl~~~ 374 (539)
T PF03137_consen 295 PKALKRLLTNPVFMCLILAGVFESFIVSGFATFLPKYLESQFGLSASQASLLTGIVSIPGAALGILLGGYIVKKFKLSAR 374 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHhhhhcchhheehheEEEEEEEecCcHH
Confidence 3467889999999998888888877777888889999876 78876544 4444444 67789999999998885332
Q ss_pred cCchhHHHHHHHHHHHH--HHHHHHh-----------c---------------------------h-----------hHH
Q 014462 259 AYPRPVAMAVAQVVMAF--ALLYYAI-----------G---------------------------W-----------PGE 287 (424)
Q Consensus 259 ~~~r~~~l~~~~~~~~~--~~ll~~~-----------~---------------------------~-----------~~~ 287 (424)
...| +.+....+.+.. ..+++.- . . ...
T Consensus 375 ~~~~-~~~v~~~v~~~~~~~~~~~~C~~~~~aGv~~~y~~~~~~~~~~~~~~~Cn~~~~~~~~~a~~G~C~~~C~~~~~~ 453 (539)
T PF03137_consen 375 GAAK-FCIVVSIVSVILYSPLFFLGCPNPPIAGVTVPYHNSTSSSPSCNLTCSCNSCCSSGNGSATPGKCPSDCCNKLIP 453 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHH-HHHHHHHHHHHHHHHHHeecCCCCceeeecCccccccCCCCCCCCCCCCCCccCCCcccccCCCcCcccccccHH
Confidence 1111 111111111111 0111100 0 0 001
Q ss_pred HHHHHHHHHHHhhhhHhHHHHHHHHhhCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh
Q 014462 288 IYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIASGIYDYYA 350 (424)
Q Consensus 288 l~~~~~l~G~~~G~~~~~~~~~~se~fg~~~~g~~~g~~~~~~~lgs~l~~~~l~g~l~d~~~ 350 (424)
+.+..++.-+..+....+...++-...+.++++.+.|+..+...+-+.+=+|+++|.+.|+.-
T Consensus 454 Fl~~~~~~~~~~~~~~~p~~~i~LR~V~~~~rs~AlGv~~~~~rllg~IPgPIifG~iiD~tC 516 (539)
T PF03137_consen 454 FLILLFILSFFTFMSQVPSTLITLRCVPPEQRSFALGVQWLIIRLLGFIPGPIIFGAIIDSTC 516 (539)
T ss_dssp ---------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHhcccchheeeeccCChhhcchhhhHHHHHHHhhcCcchHHHHhHHHhhhh
Confidence 112222223344455556666677888899999999999988777666679999999999865
No 245
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=96.22 E-value=0.21 Score=50.23 Aligned_cols=123 Identities=11% Similarity=0.115 Sum_probs=84.7
Q ss_pred HHcCCCchhH--HHHHHHHHhhhhhhhhhhhhhhhhhcccCchhHHHHHHHHHHHHHHHHHH-hchhHHHHHHHHHHHHH
Q 014462 222 QSLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVMAFALLYYA-IGWPGEIYVTTVLVGLS 298 (424)
Q Consensus 222 ~~~g~s~~~~--~~sl~si~~~~gr~~~G~lsd~~g~k~~~~r~~~l~~~~~~~~~~~ll~~-~~~~~~l~~~~~l~G~~ 298 (424)
+.+|+++.+. +.+..++.+.+-...-....|+... +....+...+.++.-..+++. ...+..++.++.+..++
T Consensus 290 ~rfg~ss~~~G~vl~~tGl~m~~~ql~~~~~l~~~~~----~~~a~l~~~l~~~vP~~llls~~~~~~~l~~~s~l~sf~ 365 (451)
T KOG2615|consen 290 GRFGYSSMQQGKVLSTTGLLMLVIQLALVPILPRYKG----NIKAVLLFSLLLIVPAFLLLSLARTPVVLYLGSTLKSFS 365 (451)
T ss_pred CccCCChhhheeeeehhhHHHHHHHHhcccccccccc----chhhHHHHHHHHHHHHHHHHhccccchhhhHHHHHHHHH
Confidence 4478887654 5566666666555554444444431 111122333333333333333 34567889999999999
Q ss_pred hhhhHhHHHHHHHHhhCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 014462 299 YGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIASGIYDYY 349 (424)
Q Consensus 299 ~G~~~~~~~~~~se~fg~~~~g~~~g~~~~~~~lgs~l~~~~l~g~l~d~~ 349 (424)
.....+....++....|..++|+..|+....+.++-++ ||.+.|.+....
T Consensus 366 ~A~~vt~Lt~Lv~~~~~~~qrG~~~Gi~~Sl~alaRai-GPlv~g~i~~Ws 415 (451)
T KOG2615|consen 366 TASVVTCLTSLVHKYGPQSQRGTLNGIFRSLGALARAI-GPLVSGVIFSWS 415 (451)
T ss_pred HHHhhHHHHHHHHhcCCcccchHHHHHHHHHHHHHHHh-hhhhhheeEEEe
Confidence 88888889999999999999999999999999999998 999998766543
No 246
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=96.19 E-value=0.061 Score=55.01 Aligned_cols=110 Identities=5% Similarity=-0.077 Sum_probs=77.2
Q ss_pred HHHHHHHHHhhhhhhhhhhhhhhhhhcccCchhHHHHHHHHHHHHHHHHH--Hhch-----hH--HHHHHHHHHHHHhhh
Q 014462 231 IYVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVMAFALLYY--AIGW-----PG--EIYVTTVLVGLSYGA 301 (424)
Q Consensus 231 ~~~sl~si~~~~gr~~~G~lsd~~g~k~~~~r~~~l~~~~~~~~~~~ll~--~~~~-----~~--~l~~~~~l~G~~~G~ 301 (424)
+...++.+.+..-.+.+-|+.|++|-|... .++..+.+++.++= +..+ .+ ....+..+.++..-.
T Consensus 83 wlsmIym~v~vp~gf~~mw~ldk~GLR~a~------llgt~ln~iGa~Ir~iss~p~v~~~f~~~l~~~Gq~iaa~Aq~F 156 (480)
T KOG2563|consen 83 WLSMIYMVVSVPFGFAAMWILDKFGLRTAL------LLGTVLNGIGAWIRLISSLPFVPPLFRRPLTHTGQSIAAAAQPF 156 (480)
T ss_pred HHHHHHHHHHHHHhhHHHHhhcccchHHHH------HHHHHHHHHHHHHhhhccCccccccchhhhhHHhHHHHHHhhhH
Confidence 366667777888888889999999977433 67777888877652 2211 12 334566666666555
Q ss_pred hHhHHHHHHHHhhCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 014462 302 HWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIASGIYD 347 (424)
Q Consensus 302 ~~~~~~~~~se~fg~~~~g~~~g~~~~~~~lgs~l~~~~l~g~l~d 347 (424)
...+-.-+..-+||+++|+.+..+..+++++|..+ +-.+.-.+..
T Consensus 157 im~lPskiA~~WF~~~qra~A~~~~v~~n~LGvav-g~llppilV~ 201 (480)
T KOG2563|consen 157 ILGLPSKIAAVWFPPDQRAIATVLGVMGNPLGVAV-GFLLPPILVP 201 (480)
T ss_pred hhccccHHHHhhCCcchhhhhhhHHHhcchHHHHH-HhhccceecC
Confidence 55555567788999999999999999999999886 5544444443
No 247
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=96.03 E-value=0.055 Score=54.90 Aligned_cols=155 Identities=9% Similarity=-0.052 Sum_probs=94.8
Q ss_pred HHHHHHHHhhhhhhhhhhhhhhhhhcccCchhHHHHHHHHHHHHHHHHHH--hc-h-hHHHHHHHHHHHHHhhhhHhHHH
Q 014462 232 YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVMAFALLYYA--IG-W-PGEIYVTTVLVGLSYGAHWAIVP 307 (424)
Q Consensus 232 ~~sl~si~~~~gr~~~G~lsd~~g~k~~~~r~~~l~~~~~~~~~~~ll~~--~~-~-~~~l~~~~~l~G~~~G~~~~~~~ 307 (424)
..++..+..++-.|.-|.++|+.|+||.. +.+...+..+...++. .. + .+...+..++..+++........
T Consensus 63 ~~aia~llia~LapiLG~iaD~~g~Rk~~-----~~~f~~i~i~~~~~L~~i~~~s~~~~~l~~~il~~i~~~~s~Vfyd 137 (438)
T COG2270 63 ASAIAGLLIALLAPILGTIADYPGPRKKF-----FGFFTAIGIISTFLLWFIPPGSYLLLLLLFLILASIGFEFSNVFYD 137 (438)
T ss_pred HHHHHHHHHHHHHHHhhhhhccCCCcchH-----HHHHHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHhcchhheehh
Confidence 55566677777888899999999988754 2232333333333332 22 2 33456677778888888889999
Q ss_pred HHHHHhhCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhccCCCCCcccCCCCCCcccCCcchHHHH
Q 014462 308 AAASELFGLKSFGALYNFLTLASPAGSLIFSGVIASGIYDYYAEKQAGLLWKYNGNMLPVSFRDQETPTCLGSICYSITC 387 (424)
Q Consensus 308 ~~~se~fg~~~~g~~~g~~~~~~~lgs~l~~~~l~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~g~~c~~~~f 387 (424)
+...++..+++.+...|+......+||.+ +.+.....-..+.. .+++..-- .+.-.-.+--|.++
T Consensus 138 s~L~~~~~k~~~~riS~lg~~~gylgs~i--~li~~~~~~~~~~~------------~~~~~~l~-~l~~~~~~~~ri~~ 202 (438)
T COG2270 138 SMLPRLTTKDNMGRISGLGWALGYLGSVI--LLIFVVLGFALGQQ------------TGITIILL-GLPPADGEDVRITG 202 (438)
T ss_pred hHhhhhcCccccCcccccccccccccchH--HHHHHHHHHhcccc------------cceeEEee-ccCccccccchhHH
Confidence 99999999988888888888888888886 34443211111100 00000000 00000011268899
Q ss_pred HHHHHHHHHHHHHHHHHhh
Q 014462 388 GIMAGLCIIAMVMSLIVVH 406 (424)
Q Consensus 388 ~i~a~~~~~~~~l~~~l~~ 406 (424)
.+.++-+++-.+-.++..+
T Consensus 203 ~l~A~W~li~~iPm~~~v~ 221 (438)
T COG2270 203 LLAALWWLLFALPMILNVH 221 (438)
T ss_pred HHHHHHHHHHHhHHHhccc
Confidence 9999888887776665543
No 248
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=95.86 E-value=0.44 Score=49.64 Aligned_cols=119 Identities=16% Similarity=0.227 Sum_probs=90.7
Q ss_pred cCCCchhH--HHHHHHHHhhhhhhhhh-hhhhhhhhcccCchhHHHHHHHHHHHHHHHHHHhch-hHHHHHHHHHHHHHh
Q 014462 224 LGYADTSI--YVSMISIWNFLGRVGGG-YFSEAIVRKFAYPRPVAMAVAQVVMAFALLYYAIGW-PGEIYVTTVLVGLSY 299 (424)
Q Consensus 224 ~g~s~~~~--~~sl~si~~~~gr~~~G-~lsd~~g~k~~~~r~~~l~~~~~~~~~~~ll~~~~~-~~~l~~~~~l~G~~~ 299 (424)
+|++..+. +.++.++.+.++.++.. .+.-.++.|+.+ ..++....+..+++++.. .|.++...++. ...
T Consensus 272 f~w~~~~~s~~~~~~~~~~~i~~l~~~~~l~~~l~~~~~i------~lGl~~~~~~~~~~af~~~~w~~~~~~v~~-~~~ 344 (463)
T KOG2816|consen 272 FGWNKKEFSDLLSLVSILGIISQLLLLPLLSSILGEKRLI------SLGLLSEFLQLLLFAFATETWMMFAAGVVV-ALA 344 (463)
T ss_pred cCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHh------hHHHHHHHHHHHHHHHhccchhhhHHHHHH-Hhh
Confidence 67776643 77777777887777766 676677766533 677788888888888665 44455555444 445
Q ss_pred hhhHhHHHHHHHHhhCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh
Q 014462 300 GAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIASGIYDYYA 350 (424)
Q Consensus 300 G~~~~~~~~~~se~fg~~~~g~~~g~~~~~~~lgs~l~~~~l~g~l~d~~~ 350 (424)
+...+..-+.++.+.+.++.|+++++......+.+.+ +|.+.+.+|..+.
T Consensus 345 ~~~~pa~~s~~s~~v~~~e~g~v~~~is~i~~l~~~~-~~~~~~~i~~~t~ 394 (463)
T KOG2816|consen 345 GIVFPAIRAFASILVSPEEQGKVFGIISGIEGLSGVV-SPALYGNIFALTL 394 (463)
T ss_pred cchhHHHHhHHHhhcccccccchhhHHHHHHHHhhhh-hHHHHHHHHHHHH
Confidence 6667788889999999999999999999999999997 8999998887665
No 249
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=95.76 E-value=2.7 Score=42.86 Aligned_cols=101 Identities=21% Similarity=0.219 Sum_probs=71.4
Q ss_pred HHHHHHHHhhhhhhhhhhhhhhhhhcccCchhHHHHHHHHHHHHHHHHHH----hchhHHHHHHHHHHHHHhhhhHhHHH
Q 014462 232 YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVMAFALLYYA----IGWPGEIYVTTVLVGLSYGAHWAIVP 307 (424)
Q Consensus 232 ~~sl~si~~~~gr~~~G~lsd~~g~k~~~~r~~~l~~~~~~~~~~~ll~~----~~~~~~l~~~~~l~G~~~G~~~~~~~ 307 (424)
+..++.+|-+++|--.-++ |+ +|.+.+.+.+.+..+..++-+ ..+.+.+.+..+..|+..|+.+.-..
T Consensus 286 Y~~~YQ~GVFISRSS~~~~--ri------r~lwils~LQ~~nl~~~~l~s~~~fipsi~ivf~lif~eGLlGGa~YVNtF 357 (402)
T PF02487_consen 286 YQLLYQLGVFISRSSLPFF--RI------RRLWILSLLQVINLVFLLLQSWYRFIPSIWIVFVLIFYEGLLGGASYVNTF 357 (402)
T ss_pred HHHHHHHHHhhhhcceeee--eh------hhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhHHHHHHH
Confidence 7778888888888765443 22 233444555544433322211 23455666778888999999998888
Q ss_pred HHHHHhhCcchhhHHHHHHHHHHHHHHHHHHHHH
Q 014462 308 AAASELFGLKSFGALYNFLTLASPAGSLIFSGVI 341 (424)
Q Consensus 308 ~~~se~fg~~~~g~~~g~~~~~~~lgs~l~~~~l 341 (424)
..++|-.++++|-.+.|+...+-++|..+ +..+
T Consensus 358 ~~I~~~~~~~~REFslg~vsvsds~GI~l-Agll 390 (402)
T PF02487_consen 358 YRISEEVPPEDREFSLGAVSVSDSLGILL-AGLL 390 (402)
T ss_pred HHHHhcCCHHHHHHHHHHHHHHhhHHHHH-HHHH
Confidence 89999999999999999999999988876 5543
No 250
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=95.52 E-value=1.5 Score=45.54 Aligned_cols=49 Identities=8% Similarity=0.112 Sum_probs=39.7
Q ss_pred HHHHHHHHHHHHhhhhHhHHHHHHHHhhCcchhhHHHHHHHHHHHHHHHH
Q 014462 287 EIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLI 336 (424)
Q Consensus 287 ~l~~~~~l~G~~~G~~~~~~~~~~se~fg~~~~g~~~g~~~~~~~lgs~l 336 (424)
...+..++.|++.....+..+.++...+ ++++..+.++.-.-..+++.+
T Consensus 355 ~~~ii~~l~G~~D~~~~t~~~~ii~~~~-~~~~~~~fsi~kfyq~~~s~v 403 (461)
T KOG3098|consen 355 LALIIGFLLGFGDACFNTQRYVIIALLY-PDDRAQAFSLFKFYQSVASCV 403 (461)
T ss_pred HHHHHHHHHhhHHHHHHHHHHHHHHHHh-cCchHHHHHHHHHHHHHHHHH
Confidence 4456778889999999999999999999 788888888877777776654
No 251
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=95.24 E-value=1.7 Score=45.37 Aligned_cols=53 Identities=11% Similarity=0.117 Sum_probs=42.7
Q ss_pred HHHHHhhhhHh-HHHHHHHHhhCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 014462 294 LVGLSYGAHWA-IVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIASGIYD 347 (424)
Q Consensus 294 l~G~~~G~~~~-~~~~~~se~fg~~~~g~~~g~~~~~~~lgs~l~~~~l~g~l~d 347 (424)
...+-.....+ +.++.+.|++..++-.+.|++..++.++|.++ |+.+..++.+
T Consensus 137 ~~elw~~~vvS~lFW~fandi~t~~qakRfy~l~~~ganlg~i~-sg~~~~~~~~ 190 (472)
T TIGR00769 137 MAELWGSVVLSLLFWGFANQITTIDEAKRFYALFGLGANVALIF-SGRTIKYFSK 190 (472)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHH
Confidence 33333344455 78899999999999999999999999999997 8888887664
No 252
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=94.94 E-value=1.2 Score=45.64 Aligned_cols=149 Identities=9% Similarity=0.068 Sum_probs=94.5
Q ss_pred cCCCchhH---HHHHHHHHhhhhhhhhhhhhhhhhhcccCchhHHHHHHHHHHHHHHH-HHHhchhHHHHHHHHHHHHHh
Q 014462 224 LGYADTSI---YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVMAFALL-YYAIGWPGEIYVTTVLVGLSY 299 (424)
Q Consensus 224 ~g~s~~~~---~~sl~si~~~~gr~~~G~lsd~~g~k~~~~r~~~l~~~~~~~~~~~l-l~~~~~~~~l~~~~~l~G~~~ 299 (424)
.|++..+. +.-...=.....-+....+.|.++.|..+ .+..+...+... ++...+...+-+.-+..|+++
T Consensus 35 kn~T~~qv~~~i~Pv~tYSyl~~l~~vflltd~l~Ykpvi------il~~~~~i~t~~lll~~~sv~~mq~~q~~yg~~~ 108 (412)
T PF01770_consen 35 KNFTEEQVNNEIYPVWTYSYLAFLLPVFLLTDYLRYKPVI------ILQALSYIITWLLLLFGTSVLAMQLMQFFYGLAT 108 (412)
T ss_pred cCCCHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhhhhHHH------HHHHHHHHHHHHHHHHHCcHHHHHHHHHHHHHHH
Confidence 68876654 22222222334556688899999988533 222222222222 233456667777777777776
Q ss_pred hhhHhHHHHHHHHhhCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhccCCCCCcccCCCCCCcccC
Q 014462 300 GAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIASGIYDYYAEKQAGLLWKYNGNMLPVSFRDQETPTCLG 379 (424)
Q Consensus 300 G~~~~~~~~~~se~fg~~~~g~~~g~~~~~~~lgs~l~~~~l~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~g 379 (424)
.+- ...++++-...+++++-++.+....+.-+|..+ |..++-.+....+.
T Consensus 109 a~e-vay~sYiys~v~~~~yq~vts~~raa~l~g~~~-s~~lgQllvs~~~~---------------------------- 158 (412)
T PF01770_consen 109 AAE-VAYYSYIYSVVDKEHYQKVTSYTRAATLVGRFI-SSLLGQLLVSFGGV---------------------------- 158 (412)
T ss_pred HHH-HHHHHHheeecCHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHhcCC----------------------------
Confidence 654 356677777778889999998888888888775 55444444443320
Q ss_pred CcchHHHHHHHHHHHHHHHHHHHHHhhhhhH
Q 014462 380 SICYSITCGIMAGLCIIAMVMSLIVVHRTKS 410 (424)
Q Consensus 380 ~~c~~~~f~i~a~~~~~~~~l~~~l~~~~~~ 410 (424)
.|...+.+..+...+++++++++...+|.
T Consensus 159 --sy~~L~~isl~~~~~a~~~~~fLP~~~~S 187 (412)
T PF01770_consen 159 --SYFQLNYISLASVSLALLIALFLPMPKRS 187 (412)
T ss_pred --CHHHHHHHHHHHHHHHHHHHHHcCCCCcc
Confidence 28888888888888888888887765544
No 253
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=94.66 E-value=6.6 Score=41.00 Aligned_cols=118 Identities=13% Similarity=0.078 Sum_probs=85.6
Q ss_pred CCCc-hhHHHHHHHHHhhhhhhhhhhhhhhhhhcccCchh-HHHHHHHHHHHHHHHHHHh-----------chhHHHHHH
Q 014462 225 GYAD-TSIYVSMISIWNFLGRVGGGYFSEAIVRKFAYPRP-VAMAVAQVVMAFALLYYAI-----------GWPGEIYVT 291 (424)
Q Consensus 225 g~s~-~~~~~sl~si~~~~gr~~~G~lsd~~g~k~~~~r~-~~l~~~~~~~~~~~ll~~~-----------~~~~~l~~~ 291 (424)
|++- .+.+-++.+++-.+..++..++--+.+++++-|++ .-+.+++.+++.+++++.. .+.++++..
T Consensus 321 g~~vp~~~fQslNp~~Iii~~pI~a~l~~~l~~~~~~ps~~~KFalGl~l~g~~fl~l~~~~~~~~~~~~~~s~~~lil~ 400 (498)
T COG3104 321 GFEVPPAWFQSLNPFFIILFSPILAALWTKLGRGNKQPSTPIKFALGLILAGLGFLILLLAGIWFGGPSGLVSVWWLVLS 400 (498)
T ss_pred ceecCHHHHHhhCHHHHHHHHHHHHHHHhHhhcCCCCCCcchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCcCHHHHHHH
Confidence 4443 34588899999999888888888887766443322 3345566666666655421 225678888
Q ss_pred HHHHHHHhhhhHhHHHHHHHHhhCcchhhHHHHHHHHHHHHHHHHHHHHHHH
Q 014462 292 TVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIAS 343 (424)
Q Consensus 292 ~~l~G~~~G~~~~~~~~~~se~fg~~~~g~~~g~~~~~~~lgs~l~~~~l~g 343 (424)
.++.++|-=...++-.+.+..+-|++-.+...+...+....|..+ +..+++
T Consensus 401 y~l~s~gEL~iSpvGLs~~t~laP~~~~s~~ma~wfLt~a~~~~l-~g~va~ 451 (498)
T COG3104 401 YVLQSFGELFISPVGLSMVTKLAPPALKSFIMAMWFLTVAAGQTL-GGQVAG 451 (498)
T ss_pred HHHHHHHHHHhCHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHh-hceecc
Confidence 999999988888889999999999887788888877777777776 666655
No 254
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=93.90 E-value=0.97 Score=46.64 Aligned_cols=116 Identities=17% Similarity=0.171 Sum_probs=76.9
Q ss_pred HHHHHHHHhhhhhhhhhhhhhhhhhcccCchhHHHHHHHHHHHHHHHHHH-h----------chhHHHHHHHHHHHHHhh
Q 014462 232 YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVMAFALLYYA-I----------GWPGEIYVTTVLVGLSYG 300 (424)
Q Consensus 232 ~~sl~si~~~~gr~~~G~lsd~~g~k~~~~r~~~l~~~~~~~~~~~ll~~-~----------~~~~~l~~~~~l~G~~~G 300 (424)
+.....+.+.++.+++.++..++.+++.+ |+++ ....++.++..+.-. . .+.+....-.++..+..+
T Consensus 256 f~~~~~~vg~~~~l~g~~~y~~~~~~~~~-R~~~-~~t~~~~~~~~l~~~~lv~~~n~~~Gi~d~~f~lgd~~l~~~~~~ 333 (433)
T PF03092_consen 256 FYGTLSIVGSIASLLGILLYRKYFSNWSW-RRIF-VVTTLVSVLASLFDLLLVTRWNLDLGIPDQWFALGDTILEEVIGM 333 (433)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCH-HHHH-HHHHHHHHHHhcccEEEEEEEeeeeCcCCeEEEEEhHHHHHHHHH
Confidence 44444466666667777777777776655 3332 222333333322210 0 111223345677778888
Q ss_pred hhHhHHHHHHHHhhCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh
Q 014462 301 AHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIASGIYDYYA 350 (424)
Q Consensus 301 ~~~~~~~~~~se~fg~~~~g~~~g~~~~~~~lgs~l~~~~l~g~l~d~~~ 350 (424)
..+-+....++++-|+..=|+.|+++....++|+.+ +..+...+.+..+
T Consensus 334 i~~mP~lvl~a~lcP~G~Egt~yall~s~~Nlg~~~-s~~lg~~l~~~~~ 382 (433)
T PF03092_consen 334 IAFMPSLVLAARLCPKGSEGTVYALLASFSNLGSSV-SSTLGAFLMELFG 382 (433)
T ss_pred HHHHHHHHHHHHHCCCCchHHHHHHHHHHHHHHHHH-HHHHHHHHHHHcC
Confidence 888888899999999999999999999999999997 8887777777665
No 255
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=93.50 E-value=0.45 Score=49.61 Aligned_cols=86 Identities=10% Similarity=0.262 Sum_probs=66.6
Q ss_pred HHHHHHHhhhhHhHHHHHHHHhhCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhccCCCCCcccCC
Q 014462 292 TVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIASGIYDYYAEKQAGLLWKYNGNMLPVSFRD 371 (424)
Q Consensus 292 ~~l~G~~~G~~~~~~~~~~se~fg~~~~g~~~g~~~~~~~lgs~l~~~~l~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~ 371 (424)
.++.|.++-.......+.-+++.|+++.++..+++.....++..+ +|.+...++...|
T Consensus 395 i~~~g~~~P~~~~~~~tlySkiLgp~~q~~~qg~~~~~~s~~~~~-~~~~~t~~~~~~g--------------------- 452 (488)
T KOG2325|consen 395 IVVFGIAFPFISTALDTLYSKILGPRDQGTMQGVFSISGSIARVV-GPIFSTAIFTLSG--------------------- 452 (488)
T ss_pred hheeccccccccchHHHHHHHHhCCccccceeEEEEeccchhhhh-hHHHHhhhHHhcC---------------------
Confidence 344566666666778899999999999999999999999999997 8998889888877
Q ss_pred CCCCcccCCcchHHHHHHHHHHHHHHHHHHHHHhhhhhH
Q 014462 372 QETPTCLGSICYSITCGIMAGLCIIAMVMSLIVVHRTKS 410 (424)
Q Consensus 372 ~~~~~c~g~~c~~~~f~i~a~~~~~~~~l~~~l~~~~~~ 410 (424)
+++.+.+.++..+++..+..++.+|-++
T Consensus 453 -----------~~~v~~~~~~~~l~~~~l~~~~~~r~~~ 480 (488)
T KOG2325|consen 453 -----------PRPVWIILLCLLLVVAALWIVFLKRLVP 480 (488)
T ss_pred -----------ccHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 7777777777666665555555444433
No 256
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=92.56 E-value=0.34 Score=50.19 Aligned_cols=101 Identities=11% Similarity=0.095 Sum_probs=79.5
Q ss_pred HHHHHHHhhhhhhhhhhhhhhhhhcccCchhHHHHHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHhhhhHhHHHHHHHH
Q 014462 233 VSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVMAFALLYYAIGWPGEIYVTTVLVGLSYGAHWAIVPAAASE 312 (424)
Q Consensus 233 ~sl~si~~~~gr~~~G~lsd~~g~k~~~~r~~~l~~~~~~~~~~~ll~~~~~~~~l~~~~~l~G~~~G~~~~~~~~~~se 312 (424)
.++......+..+.++.+.|+++.|..+ .++......-.+.+...+.+.+|+..++.|+|.+..|+-.-.+.+|
T Consensus 56 ~aiiY~~ftv~~l~~psiv~~i~~K~~l------v~ga~~y~~f~~gfl~~N~y~~yfssallG~Gaallw~GqG~ylt~ 129 (461)
T KOG3098|consen 56 QAIIYAFFTVSCLFAPSIVNFLGPKWAL------VIGATCYAAFPLGFLFPNSYYLYFSSALLGFGAALLWTGQGGYLTS 129 (461)
T ss_pred HHHHHHHHHHHHHhhHHHHHHhhHHHHH------HHHhHHHHHHHHHHHhcchHHHHHHHHHhhhhHHheecccceehhh
Confidence 5566666677788888899999988544 5655555555555556778889999999999999999999999999
Q ss_pred hhCcchhhHHHHHHHHHHHHHHHHHHHH
Q 014462 313 LFGLKSFGALYNFLTLASPAGSLIFSGV 340 (424)
Q Consensus 313 ~fg~~~~g~~~g~~~~~~~lgs~l~~~~ 340 (424)
...++...++.++.......+.++ |..
T Consensus 130 ~st~~tie~Nisi~Wai~~~~li~-Ggi 156 (461)
T KOG3098|consen 130 NSTRETIERNISIFWAIGQSSLII-GGI 156 (461)
T ss_pred cCChhhHHHHHHHHHHHHHHHHHh-hhH
Confidence 999999999998887777776665 443
No 257
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=92.49 E-value=1 Score=47.03 Aligned_cols=95 Identities=14% Similarity=0.116 Sum_probs=65.3
Q ss_pred HHHHHHHHhhhhhhhhhhhhhhhhhcccCchhHHHHHHHHHHHHHHHHHH-hchhHHHHHHHHHHHHHhhhhHhHHHHHH
Q 014462 232 YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVMAFALLYYA-IGWPGEIYVTTVLVGLSYGAHWAIVPAAA 310 (424)
Q Consensus 232 ~~sl~si~~~~gr~~~G~lsd~~g~k~~~~r~~~l~~~~~~~~~~~ll~~-~~~~~~l~~~~~l~G~~~G~~~~~~~~~~ 310 (424)
.-++..+.+++..+..|++-.++.+ ... +.+.+..++.+..++++. ..+.+..|++.++++..|....++...-+
T Consensus 303 veA~~tllga~~a~~ag~~~~~w~~-~~~---l~l~v~s~~~~gll~~m~~t~~Iw~~Y~~yvlf~~~y~flitia~~~i 378 (511)
T TIGR00806 303 VDAASTLLGAITSFIAGFVNIRWAR-WSK---LLIAVVSAIQAGLVFWMSQSHDIWVLYVTYVLFRGIYQFLVPIATFQI 378 (511)
T ss_pred HHHHHHHHHHHHHHHHHhhcCCchh-hHH---HHHHHHHHHHHHHhhhhhcccchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4445555666777888888544421 111 233444444444444444 45678899999999999999999999999
Q ss_pred HHhhCcchhhHHHHHHHHHH
Q 014462 311 SELFGLKSFGALYNFLTLAS 330 (424)
Q Consensus 311 se~fg~~~~g~~~g~~~~~~ 330 (424)
+.....+.+|..+|+.++..
T Consensus 379 A~~L~~~~~aLvFGiNtfvA 398 (511)
T TIGR00806 379 ASSLSKELCALVFGINTFVA 398 (511)
T ss_pred HHHhcccceEEEEecHHHHH
Confidence 99888888899999866544
No 258
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=92.39 E-value=15 Score=37.95 Aligned_cols=53 Identities=11% Similarity=0.170 Sum_probs=39.9
Q ss_pred HHHHHHHHHHHHHHhhhhhhhhhhhhhccCCCCCcccCCCCCCcccCCcchHHHHHHHHHHHHHHHHHHHHHhhhhhHHH
Q 014462 333 GSLIFSGVIASGIYDYYAEKQAGLLWKYNGNMLPVSFRDQETPTCLGSICYSITCGIMAGLCIIAMVMSLIVVHRTKSVY 412 (424)
Q Consensus 333 gs~l~~~~l~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~g~~c~~~~f~i~a~~~~~~~~l~~~l~~~~~~~~ 412 (424)
.-+ ++|.+.|.+.+..+ +..+..+.++.++++..+-.++..+..+..
T Consensus 161 ckl-laPl~vG~l~t~~s--------------------------------~~~~~~~i~~~N~~S~~vEy~~l~~VY~~~ 207 (432)
T PF06963_consen 161 CKL-LAPLFVGLLMTFAS--------------------------------PVIAAIFIAGWNLASVFVEYFLLARVYNSV 207 (432)
T ss_pred HHH-HHHHHHHHHhhccC--------------------------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 444 59999999988766 778889999999999988888776654444
Q ss_pred HHHhhh
Q 014462 413 AQLYGN 418 (424)
Q Consensus 413 ~~~~~~ 418 (424)
+++..+
T Consensus 208 P~L~~~ 213 (432)
T PF06963_consen 208 PALAVK 213 (432)
T ss_pred hHhcCC
Confidence 445333
No 259
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=92.17 E-value=0.64 Score=47.83 Aligned_cols=127 Identities=13% Similarity=0.084 Sum_probs=83.6
Q ss_pred HhcHHHHHHHcCCCchhH--HHHHHHHHhhhhhhhhhhhhhhhhhcccCchhHHHHHHHHHHHHHHHHHHh---------
Q 014462 214 IDNLGQICQSLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVMAFALLYYAI--------- 282 (424)
Q Consensus 214 ~~~l~~i~~~~g~s~~~~--~~sl~si~~~~gr~~~G~lsd~~g~k~~~~r~~~l~~~~~~~~~~~ll~~~--------- 282 (424)
...++++.++.|.+.... +--.--+.+++.+++.|..|||...|..-.||.+ ..+...+++++.++..
T Consensus 52 lsy~tPyl~~lGvphk~~S~iw~~gPi~G~~vQP~vG~~SDrc~sr~GRRRPfI-~~~s~~i~~~l~Lig~aaDig~~lg 130 (498)
T KOG0637|consen 52 LSYLTPYLQSLGVPHKWSSIIWLCGPLSGLLVQPLVGSASDRCTSRYGRRRPFI-LAGSLLIAVSLFLIGYAADIGLLLG 130 (498)
T ss_pred hccccHHHHHcCCCcccccccccccccccceecccccccccccccccccccchH-HHhhHHHHHHHhhhhhHhhhhHHhc
Confidence 457889999999986533 3344457788899999999997644433333333 3334444455444321
Q ss_pred ch--h----H---HHHHHHHHHHHHhhhhHhHHHHHHHHhhCcchhhH-HHHHHHHHHHHHHHHHHHHHHH
Q 014462 283 GW--P----G---EIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGA-LYNFLTLASPAGSLIFSGVIAS 343 (424)
Q Consensus 283 ~~--~----~---~l~~~~~l~G~~~G~~~~~~~~~~se~fg~~~~g~-~~g~~~~~~~lgs~l~~~~l~g 343 (424)
.+ . . ...++..+.-++.-...++.=+...++....+.-+ +++.......+|+.+ | +..|
T Consensus 131 d~~~~~~~~rai~~~~lg~~LLD~A~n~~qgp~ra~L~Dl~~~d~~~~~Ans~f~~f~avGnvL-G-Y~~g 199 (498)
T KOG0637|consen 131 DNERKPVKPRAIVLFILGFWLLDVANNTLQGPCRALLADLARGDAKKTRANSVFSFFMAVGNVL-G-YALG 199 (498)
T ss_pred CCcccccchHHHHHHHHHhHHHHhhhhhhhhhHHHHHHHhccChhhhhccchhHHHHHHhccee-e-eecc
Confidence 11 1 1 22334444455666778888899999998887777 889999999999986 4 4444
No 260
>KOG3810 consensus Micronutrient transporters (folate transporter family) [Coenzyme transport and metabolism]
Probab=92.04 E-value=1.4 Score=43.92 Aligned_cols=174 Identities=16% Similarity=0.181 Sum_probs=101.8
Q ss_pred HHHHHHHHHhhhhHHHHHhcHHHHH-HHcCCCchh----HHHHHHHHHhhhhhhhhhhhhhhhhhcccCchhHHHHHHHH
Q 014462 197 LLLFFSLVLASGSGLTVIDNLGQIC-QSLGYADTS----IYVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQV 271 (424)
Q Consensus 197 wll~~~~~~~~~~~~~~~~~l~~i~-~~~g~s~~~----~~~sl~si~~~~gr~~~G~lsd~~g~k~~~~r~~~l~~~~~ 271 (424)
|-+++++. .+++.-+.|..|++ ++..-++.. ..=++..+.++++.+..|++.-.+.|. +...+.++.+
T Consensus 239 WSlWwAl~---scg~~QV~nY~Q~LW~~~~~~~~~vyNG~veAv~tlLGa~~~~~~g~l~i~w~r~----g~~ll~~~s~ 311 (433)
T KOG3810|consen 239 WSLWWALA---SCGYYQVTNYTQILWKEVAPNPANVYNGAVEAVSTLLGAIAALAAGYLNINWNRW----GDLLLAVGSA 311 (433)
T ss_pred hHHHHHHh---hchhHHHHHHHHHHHHhhCCCchhhhcCHHHHHHHHHHHHHHHHHHheeeccchh----hHHHHHHHHH
Confidence 55555432 33444444556665 333222221 133444555677778888885555443 2235566655
Q ss_pred HHHHHHHHHH-hchhHHHHHHHHHHHHHhhhhHhHHHHHHHHhhCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh
Q 014462 272 VMAFALLYYA-IGWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIASGIYDYYA 350 (424)
Q Consensus 272 ~~~~~~ll~~-~~~~~~l~~~~~l~G~~~G~~~~~~~~~~se~fg~~~~g~~~g~~~~~~~lgs~l~~~~l~g~l~d~~~ 350 (424)
..+...++++ ....+..|++.++....+....++....+++....+.+|..+|+.....- ++-.++.-.+.|..|
T Consensus 312 ~~agllf~m~~t~~Iw~~Ya~yvlfr~~y~l~itiA~~~iA~nL~~e~~gLvFGiNTFvAl----~lQsilT~iVvd~~g 387 (433)
T KOG3810|consen 312 VQAGLLFIMAQTQHIWVCYAGYVLFRVIYQLTITIATFQIARNLSSELFGLVFGINTFVAL----ILQSILTLIVVDDRG 387 (433)
T ss_pred HhhhhhhhhhcccceehhhhhHHHHHhhHhhhhhHHHHHHHHhhhhhhheeeeehHHHHHH----HHHHhheEEEEcccc
Confidence 5554444444 45678899999999999999999998888888888999999998554332 222322223445444
Q ss_pred hhhhhhhhhccCCCCCcccCCCCCCcccCCcchHHHHHHHHHHHHHHHHHHH
Q 014462 351 EKQAGLLWKYNGNMLPVSFRDQETPTCLGSICYSITCGIMAGLCIIAMVMSL 402 (424)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~~~~~~~~~c~g~~c~~~~f~i~a~~~~~~~~l~~ 402 (424)
-+. + .-..-.-|..=|++.+++.+++..+..
T Consensus 388 ~~L-------------~--------ir~Q~~~Y~~Yf~v~~~i~~~~~~~~~ 418 (433)
T KOG3810|consen 388 LGL-------------D--------IRTQFVVYSSYFIVLGVIFLIGFGIEY 418 (433)
T ss_pred cCC-------------C--------cceeEEEEeehHHHHHHHHHHHHHHHH
Confidence 111 0 000011245558888988888876643
No 261
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]
Probab=92.00 E-value=1.3 Score=47.35 Aligned_cols=164 Identities=16% Similarity=0.223 Sum_probs=103.6
Q ss_pred HHhhhhHHHHHhcHHHHH-HHcCCCchhH--HHHHHHHHhhhhhhhhhhhhhhhhhcccCchhHHHHHHHHHHHHHHHHH
Q 014462 204 VLASGSGLTVIDNLGQIC-QSLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVMAFALLYY 280 (424)
Q Consensus 204 ~~~~~~~~~~~~~l~~i~-~~~g~s~~~~--~~sl~si~~~~gr~~~G~lsd~~g~k~~~~r~~~l~~~~~~~~~~~ll~ 280 (424)
.+-..+.+++..|+-.++ ..++.+...+ .++.++-..+...+.+++++|.+--|... +.++.++..++..++
T Consensus 47 ~~e~~a~~g~~~nlv~ylt~~~~~~~~~aa~~v~~f~G~~~~~~l~g~~laD~f~gry~t-----I~~~s~i~~~G~~~l 121 (571)
T KOG1237|consen 47 VLERLAFFGLVSNLVTYLTLELHASGGGAANNVNAFGGTQFLLPLLGAFLADSFLGRYFT-----INIGSLISLLGLFGL 121 (571)
T ss_pred HHHHHhHhcchhHHHHHHHHHhccchHHHHHHHHHHhhHHHHHHHHHHHHHHHHhHHHHH-----HHHHHHHHHHHHHHH
Confidence 333444445555665555 4577765443 77777777888889999999988543321 133333333332221
Q ss_pred H-----h---c---------------h---hHHHHHHHHHHHHHhhhhHhHHHHHHHHhhCcc------hhhHHHHHHHH
Q 014462 281 A-----I---G---------------W---PGEIYVTTVLVGLSYGAHWAIVPAAASELFGLK------SFGALYNFLTL 328 (424)
Q Consensus 281 ~-----~---~---------------~---~~~l~~~~~l~G~~~G~~~~~~~~~~se~fg~~------~~g~~~g~~~~ 328 (424)
. . . + ...++.+.-++.+|.|+.-+...+.-++-|+.+ +...-+|....
T Consensus 122 t~~a~~~~l~p~~~~~~~~~~~c~~~s~~q~~~~~~~l~lia~G~gg~r~~~~~fGadQfd~~~~~~~~~~~~fFnW~yf 201 (571)
T KOG1237|consen 122 TLSAMIPALLPFMCKFKPGGNVCESPSKLQLAVLYGALYLIALGAGGIRPCLLAFGADQFDELDPVEVKGIPSFFNWFYF 201 (571)
T ss_pred HHHHHhhhcCCccccCCCCCCcccCcchHHHHHHHHHHHHheeccCCCCCcchhhcccccCccCcchhhCcccchhHHHH
Confidence 1 0 0 0 125677777888899999888999999999722 23467788888
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhccCCCCCcccCCCCCCcccCCcchHHHHHHHHHHHHHHHHHHHHHh
Q 014462 329 ASPAGSLIFSGVIASGIYDYYAEKQAGLLWKYNGNMLPVSFRDQETPTCLGSICYSITCGIMAGLCIIAMVMSLIVV 405 (424)
Q Consensus 329 ~~~lgs~l~~~~l~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~g~~c~~~~f~i~a~~~~~~~~l~~~l~ 405 (424)
...+|..+ +..+.-++-|..+ |...|.+..++.+++.++-+...
T Consensus 202 ~~~~g~l~-a~t~~vyiq~~~~--------------------------------w~lgf~i~~~~~~lai~iF~~g~ 245 (571)
T KOG1237|consen 202 SQNGGALL-AQTVLVYIQDNVG--------------------------------WKLGFGIPTVLNALAILIFLPGF 245 (571)
T ss_pred HHHHHHHH-HHHHHHhhhhccc--------------------------------ceeeccHHHHHHHHHHHHHHcCc
Confidence 88888876 4444444333333 88899998888887766655433
No 262
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=91.26 E-value=0.04 Score=58.48 Aligned_cols=173 Identities=14% Similarity=0.146 Sum_probs=2.6
Q ss_pred hcHHHHHHHcCCCchhH--HHHHHHHHhhhhhhhhhhhhhhhhhcccCchhHHHHHHHHHHHHHHHHHHhch--------
Q 014462 215 DNLGQICQSLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVMAFALLYYAIGW-------- 284 (424)
Q Consensus 215 ~~l~~i~~~~g~s~~~~--~~sl~si~~~~gr~~~G~lsd~~g~k~~~~r~~~l~~~~~~~~~~~ll~~~~~-------- 284 (424)
..+.++-+.++++.+++ +.+.+-+++.+..+...++.+|.. ||-|+..+.++++++.++++...
T Consensus 24 ~~lttiErRF~l~S~~~G~i~s~~di~~~~~~~~vsy~g~~~h------rprwig~g~~~~~~g~~l~~lPhf~~~~y~~ 97 (539)
T PF03137_consen 24 SSLTTIERRFGLSSSQSGLISSSYDIGSLVVVLFVSYFGGRGH------RPRWIGIGALLMGLGSLLFALPHFLSGPYSY 97 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhcC------CcceeeecHHHHHHHHHHHhccHhhcCCCcc
Confidence 35667777789887665 777888888888887777765532 22344666677776665543100
Q ss_pred -------------------------------------------hHHHHHHHHHHHHHhhhhHhHHHHHHHHhhCcchhhH
Q 014462 285 -------------------------------------------PGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGA 321 (424)
Q Consensus 285 -------------------------------------------~~~l~~~~~l~G~~~G~~~~~~~~~~se~fg~~~~g~ 321 (424)
...++++-++.|+|....+++-.+++=|..++|+-+.
T Consensus 98 ~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~gq~l~GiG~~pl~tLG~tYiDDnv~~~~spl 177 (539)
T PF03137_consen 98 EEASNSNGNSSISSNLCDSSSSSQASSDCQDCCSSSSSSLSGYFYVFILGQLLIGIGATPLYTLGITYIDDNVSKKNSPL 177 (539)
T ss_dssp ------------------------------------------------------SSS-----------------------
T ss_pred ccccccccccccccccccccccccccCccccccccccccchHHHHHHHHHHHHHhccccCCccceeeeeccccccccCcc
Confidence 1234556777888888899999999999999999888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhccCCCCCc-ccCCCCCCcccCCcchHHHHHHHHHHHHHHHHH
Q 014462 322 LYNFLTLASPAGSLIFSGVIASGIYDYYAEKQAGLLWKYNGNMLPV-SFRDQETPTCLGSICYSITCGIMAGLCIIAMVM 400 (424)
Q Consensus 322 ~~g~~~~~~~lgs~l~~~~l~g~l~d~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~c~g~~c~~~~f~i~a~~~~~~~~l 400 (424)
..|++.....+|-.+ |=.++|.....+.+-.. ..++ .....+++.=.| .|-..|++.+.+.++..+.
T Consensus 178 YiGi~~~~~~lGPa~-Gf~lg~~~L~~yvD~~~---------~~~~~~~i~p~dp~WvG--AWWLGfli~g~~~~l~aip 245 (539)
T PF03137_consen 178 YIGILYAMSILGPAL-GFLLGSFCLRIYVDFPK---------VPPDGVGITPSDPRWVG--AWWLGFLICGILLFLSAIP 245 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred chhhhhHHhhccHHH-HHHHHHHHHhceeCCcc---------ccccCCCCCCCCccHHH--HHHHHHHHHHHHHHHHHHH
Confidence 889888888877775 54455544332210000 0000 000000111122 3777788888877776665
Q ss_pred HHHHh
Q 014462 401 SLIVV 405 (424)
Q Consensus 401 ~~~l~ 405 (424)
.+.+-
T Consensus 246 l~~FP 250 (539)
T PF03137_consen 246 LFFFP 250 (539)
T ss_dssp -----
T ss_pred HHcCC
Confidence 55544
No 263
>PF01733 Nucleoside_tran: Nucleoside transporter; InterPro: IPR002259 Delayed-early response (DER) gene products include growth progression factors and several unknown products of novel cDNAs. Murine and human cDNAs from one novel DER gene (DER12) have been characterised to identify its product and to examine its role in the growth response []. Both sequences encode a hydrophobic 36kDa protein that is predicted to contain 8 transmembrane (TM) domains. The protein has been localised to the nucleolus, where its concentration increases following mitogen stimulation []. Although the function of the protein is unknown, its identification as a nucleolar gene transcriptionally activated by growth factors implicates it as participating in the proliferative response []. Sequence analysis reveals the protein to share a high degree of similarity with the C-terminal portion of equilibrative nucleoside transporters. These proteins are integral membrane proteins which enable the movement of hydrophilic nucleosides and nucleoside analogs down their concentration gradients across cell membranes. ENT family members have been identified in humans, mice, fish, tunicates, slime molds, and bacteria []. ; GO: 0005337 nucleoside transmembrane transporter activity, 0006810 transport, 0016020 membrane; PDB: 1HXI_A.
Probab=90.98 E-value=0.08 Score=52.04 Aligned_cols=99 Identities=10% Similarity=0.107 Sum_probs=3.8
Q ss_pred HHHHHHHHhhhhhhhhhhhhhhhh--hcccCchhHHHHHHHHHHHHHHHHHH------------hchhHHHHHHHHHHHH
Q 014462 232 YVSMISIWNFLGRVGGGYFSEAIV--RKFAYPRPVAMAVAQVVMAFALLYYA------------IGWPGEIYVTTVLVGL 297 (424)
Q Consensus 232 ~~sl~si~~~~gr~~~G~lsd~~g--~k~~~~r~~~l~~~~~~~~~~~ll~~------------~~~~~~l~~~~~l~G~ 297 (424)
...++.++.++||.+.++. ++. +++.+. ...+.=++. +.++++. +.+.+..++..++.|+
T Consensus 187 ~fl~Fn~gD~iGR~l~~~~--~~~~~~~~~l~---~~s~~R~~f-iPlf~~cn~~p~~~~~~~~~~~d~~~~i~~~l~g~ 260 (309)
T PF01733_consen 187 LFLLFNLGDFIGRFLASWP--RWPGPSPRWLW---ILSLLRFLF-IPLFLLCNVQPRPRYLPVLFNSDAWFIILMLLFGF 260 (309)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHhcchhccee--EecccccccHH---HHHHHHHHH-HHHHHHHHhhcccccCCCcccchHHHHHHHHHHHH
Confidence 5667899999999999976 232 222211 111111111 1111111 1233455667889999
Q ss_pred HhhhhHhHHHHHHHHhhCcchhhHHHHHHHHHHHHHHHH
Q 014462 298 SYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLI 336 (424)
Q Consensus 298 ~~G~~~~~~~~~~se~fg~~~~g~~~g~~~~~~~lgs~l 336 (424)
.+|-..+....+.++..+++++..+-+++..+..+|-.+
T Consensus 261 TNGyl~tl~m~~~p~~v~~~e~e~aG~~~~~~L~~Gl~~ 299 (309)
T PF01733_consen 261 TNGYLSTLAMMYAPKSVSPEERELAGSVMSFFLSFGLFI 299 (309)
T ss_dssp ------HHHH-----------------------------
T ss_pred ccchhhhceeeeCCCcCCHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999998888888877777766666554
No 264
>COG4262 Predicted spermidine synthase with an N-terminal membrane domain [General function prediction only]
Probab=90.82 E-value=19 Score=36.11 Aligned_cols=116 Identities=19% Similarity=0.184 Sum_probs=62.2
Q ss_pred HHHHHHHHHhhhhHHHHHhcHHHHHHHc-CCCc--hhHHHHHHHHHhhhhhhhhhhhhhhhhhcc-cCchhHHHHHHHHH
Q 014462 197 LLLFFSLVLASGSGLTVIDNLGQICQSL-GYAD--TSIYVSMISIWNFLGRVGGGYFSEAIVRKF-AYPRPVAMAVAQVV 272 (424)
Q Consensus 197 wll~~~~~~~~~~~~~~~~~l~~i~~~~-g~s~--~~~~~sl~si~~~~gr~~~G~lsd~~g~k~-~~~r~~~l~~~~~~ 272 (424)
|++..+.|....+|+.+-..+......+ |-.. .+.+++.+-...-+|..++-++.|.--.-+ ..-..+.-.++-+-
T Consensus 10 alL~laVf~~aa~GlvyElal~tLatyLlG~~Ilq~S~Iia~yl~amGlGs~~sry~~dd~~~~~Fv~vElllgligg~S 89 (508)
T COG4262 10 ALLLLAVFVCAACGLVYELALGTLATYLLGGGILQTSLIIAGYLAAMGLGSLLSRYVLDDAALARFVDVELLLGLIGGVS 89 (508)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCceeehHHHHHHHHHHhchhhhhhccccCchHHHHHHHHHHHHHHhccch
Confidence 5666666666777887777777777764 4433 233555555555555555555444332111 00000011111111
Q ss_pred HHHHHHHHHhc---hhHHHHHHHHHHHHHhhhhHhHHHHHHHH
Q 014462 273 MAFALLYYAIG---WPGEIYVTTVLVGLSYGAHWAIVPAAASE 312 (424)
Q Consensus 273 ~~~~~ll~~~~---~~~~l~~~~~l~G~~~G~~~~~~~~~~se 312 (424)
.++..+.++.. +.+.+++..+++|.-.|+-.++...+...
T Consensus 90 a~~ly~~FA~~~~~~~~Vly~lt~vIG~LVG~EiPL~mrml~~ 132 (508)
T COG4262 90 AAALYLLFALESAPSRLVLYALTAVIGVLVGAEIPLLMRMLQR 132 (508)
T ss_pred HHHHHHHHHhccchHHHHHHHHHHHHHHHHhcchHHHHHHHHH
Confidence 12222234432 34578889999999889888877776655
No 265
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=89.44 E-value=19 Score=39.67 Aligned_cols=70 Identities=17% Similarity=0.217 Sum_probs=56.1
Q ss_pred CHHHhhhhHHHHHHHHHHHHhhhhHHHHHhcHHHHHHH-cCCCchhH--HHHHHHH-Hhhhhhhhhhhhhhhhh
Q 014462 186 TLPQALMKADFLLLFFSLVLASGSGLTVIDNLGQICQS-LGYADTSI--YVSMISI-WNFLGRVGGGYFSEAIV 255 (424)
Q Consensus 186 t~~~~l~~~~fwll~~~~~~~~~~~~~~~~~l~~i~~~-~g~s~~~~--~~sl~si-~~~~gr~~~G~lsd~~g 255 (424)
+++++++|+.|....++..+......++...+|-+++. +|.+++.+ ++...++ +.++|-+++|++.-|+-
T Consensus 384 s~~~ll~N~if~~~~l~~~~~~~~~~G~~tFlPKyLE~Qfg~sas~An~l~G~i~vp~~~~Gi~lGG~iikkfk 457 (735)
T KOG3626|consen 384 SIKRLLSNPIFMLVVLASVIESLAITGYITFLPKYLETQFGISASLANILTGSIGVPAAAVGIFLGGLIIKKFK 457 (735)
T ss_pred HHHHHhcCchHHHHHHHHHHHHHHHhhHHHhhHHHHHHHcCCCHHHHHHHhhhhhhhhhhhhhhccceeeeeec
Confidence 56779999999999999888888888899999999965 89987655 5545554 45578889999988774
No 266
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=89.31 E-value=10 Score=39.11 Aligned_cols=154 Identities=18% Similarity=0.162 Sum_probs=91.4
Q ss_pred HHHhhhhHHHHHHHHHHHHhhhhHHHHHhcHHHHHHHcCCCchhH--HHHHHHHHhhhhhhhhhhhhhhhhhcccCchhH
Q 014462 187 LPQALMKADFLLLFFSLVLASGSGLTVIDNLGQICQSLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPV 264 (424)
Q Consensus 187 ~~~~l~~~~fwll~~~~~~~~~~~~~~~~~l~~i~~~~g~s~~~~--~~sl~si~~~~gr~~~G~lsd~~g~k~~~~r~~ 264 (424)
++.-++.+.|. -.+++.+.+...+.+.+.+..++.+.|+++... +-++-++.+..|.....++..|+|..|.- .
T Consensus 252 w~~Y~~q~vfl-as~alalLY~TVLsf~~lmt~yl~~~G~s~~~igi~R~~gav~Gl~gT~~~p~l~~riGlvr~G---~ 327 (432)
T PF06963_consen 252 WRTYFRQPVFL-ASFALALLYFTVLSFGGLMTAYLKSQGYSPSVIGIFRGLGAVFGLLGTWVYPWLMKRIGLVRAG---L 327 (432)
T ss_pred HHHHHhCHHHH-HHHHHHHHHHHHhcCcHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhhH---H
Confidence 33344444433 333443444445555556777888889998754 77788888999999999999999865533 1
Q ss_pred HHHHHHH-HHHHHHHHHH-hchh-HHHHHHHHHHHHH--hhhhHh---HHHHHHHHhhCcchhhHHHHHHHHHHHHHHHH
Q 014462 265 AMAVAQV-VMAFALLYYA-IGWP-GEIYVTTVLVGLS--YGAHWA---IVPAAASELFGLKSFGALYNFLTLASPAGSLI 336 (424)
Q Consensus 265 ~l~~~~~-~~~~~~ll~~-~~~~-~~l~~~~~l~G~~--~G~~~~---~~~~~~se~fg~~~~g~~~g~~~~~~~lgs~l 336 (424)
+....+. +..++...+. ..++ .......++.|+. -=+.|+ ...-++.|..|.++||...|+-+....+...+
T Consensus 328 ~~l~~q~~~L~~~v~~~~~~~~~~~~~s~~~l~~gi~~SR~GLW~fDL~~~qi~Qe~V~~~~Rg~v~gvq~sl~~lf~ll 407 (432)
T PF06963_consen 328 WSLWWQWVCLALCVVSFWAPGSPFSSISAYLLLGGIALSRIGLWSFDLAVTQIMQENVPESERGAVSGVQNSLQSLFELL 407 (432)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCCchhhHHHHHHHHHHHHHHHHHhhhHHHHHhhcccCCHHHhhHHHHHHHHHHHHHHHH
Confidence 2222222 2222222222 2222 2223333333432 223443 45667788999999999999999888887775
Q ss_pred HHHHHHHHHH
Q 014462 337 FSGVIASGIY 346 (424)
Q Consensus 337 ~~~~l~g~l~ 346 (424)
-++.+.+.
T Consensus 408 --~~~~~ii~ 415 (432)
T PF06963_consen 408 --SFVLTIIF 415 (432)
T ss_pred --HHHHHhcc
Confidence 34555444
No 267
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=88.96 E-value=1.7 Score=34.15 Aligned_cols=66 Identities=8% Similarity=-0.004 Sum_probs=45.2
Q ss_pred HHHHHhcHHHHHHHcCCCchhH--HHHHHHHHhhhhhhhhhhhhhhhhhcccCchhHHHHHHHHHHHHHHHHHH
Q 014462 210 GLTVIDNLGQICQSLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVMAFALLYYA 281 (424)
Q Consensus 210 ~~~~~~~l~~i~~~~g~s~~~~--~~sl~si~~~~gr~~~G~lsd~~g~k~~~~r~~~l~~~~~~~~~~~ll~~ 281 (424)
-+.+...+|.+.++.++|.++. +-+...++..+|.+...++.++..+++. +..+.+...+..+.++
T Consensus 8 RFayTplLP~M~~~~~ls~~~ag~lasaNy~GYL~GAl~~~~~~~~~~~~~~------~~~~l~~~~~~~~~ma 75 (85)
T PF06779_consen 8 RFAYTPLLPLMQADGGLSLSQAGWLASANYLGYLVGALLASRLPRHSRPRRL------LRAGLLLTVLSTAAMA 75 (85)
T ss_pred HHHHHhHhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHH------HHHHHHHHHHHHHHHH
Confidence 3556667899999999987654 8888889999999999888776443322 2444444444444444
No 268
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=88.84 E-value=6.3 Score=40.17 Aligned_cols=106 Identities=15% Similarity=0.174 Sum_probs=64.9
Q ss_pred HHHH-HHHHhhhhhhhhhhhhhhhhhcccCchhHHHHHHHHHHHHHHHHHH--------hchhHHHHHHHHHHHHHhhhh
Q 014462 232 YVSM-ISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVMAFALLYYA--------IGWPGEIYVTTVLVGLSYGAH 302 (424)
Q Consensus 232 ~~sl-~si~~~~gr~~~G~lsd~~g~k~~~~r~~~l~~~~~~~~~~~ll~~--------~~~~~~l~~~~~l~G~~~G~~ 302 (424)
.+.+ +.++..+|++.+.+.-+.- +|.. +..+.+=+..+..+.+. +.+.++..+...+.|+.+|=.
T Consensus 287 ~~~l~fN~~d~vG~~~a~~~~~~~--~r~l----~i~v~lR~lfiPlF~~cn~~~~~v~~~~~~~~~~l~~~lglsnGYl 360 (406)
T KOG1479|consen 287 LVFLSFNVFDLIGSILAALLTWPD--PRKL----TIPVLLRLLFIPLFLLCNYPPLPVVFESDGWFIFLMSLLGLSNGYL 360 (406)
T ss_pred HHHHHhHHHHHhhhhhhhcccCCC--Ccee----hHHHHHHHHHHHHHHHhccCCCCceecCchHHHHHHHHHHhccchH
Confidence 4555 8899999998888874332 2222 11221111222222211 344567788899999999999
Q ss_pred HhHHHHHHHHhhCcchhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 014462 303 WAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIASGI 345 (424)
Q Consensus 303 ~~~~~~~~se~fg~~~~g~~~g~~~~~~~lgs~l~~~~l~g~l 345 (424)
.++...++.+-.++++.-.+-+++...-..|-.. +.+.+++
T Consensus 361 tsl~m~~aPk~v~~~e~e~aG~~m~~fl~~Gl~~--G~~~s~l 401 (406)
T KOG1479|consen 361 TSLIMMYAPKQVKPSEKEAAGNLMVFFLVGGLAL--GSLLSWV 401 (406)
T ss_pred hhheehhcCCCCChHHHHHHHHHHHHHHHHHHHH--hhHHHHH
Confidence 9999999999998777666655555554444432 3444543
No 269
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=88.30 E-value=2.1 Score=46.81 Aligned_cols=172 Identities=15% Similarity=0.126 Sum_probs=106.3
Q ss_pred cHHHHHHHcCCCchhH--HHHHHHHHhhhhhhhhhhhhhhhhhcccCchhHHHHHHHHHHHHHHHHHHhc----------
Q 014462 216 NLGQICQSLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVMAFALLYYAIG---------- 283 (424)
Q Consensus 216 ~l~~i~~~~g~s~~~~--~~sl~si~~~~gr~~~G~lsd~~g~k~~~~r~~~l~~~~~~~~~~~ll~~~~---------- 283 (424)
-+.++-+.++++.++. +.+.+-+++.+.-....|..-|..|-|.+ .++.++|+++.++++..
T Consensus 119 ~IttiErRF~i~Ss~sG~I~s~~dig~~l~i~fVsYfG~r~HrPr~I------g~G~~~m~lgsll~alPHf~~~~y~~~ 192 (735)
T KOG3626|consen 119 VITTIERRFKISSSQSGLIASSYDIGNLLLIIFVSYFGSRGHRPRWI------GIGLVLMGLGSLLFALPHFFSGPYEYE 192 (735)
T ss_pred hhhhhhhhcCCCCCcceeEeeecccchhhhhHhHHHhccccCcccee------eechhHHHHHHHHHhChHHhcCcchhh
Confidence 4455556678876654 66777778877777777766555443332 45555555555443211
Q ss_pred ----------h--------------------------------hH-HHHHHHHHHHHHhhhhHhHHHHHHHHhhCcchhh
Q 014462 284 ----------W--------------------------------PG-EIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFG 320 (424)
Q Consensus 284 ----------~--------------------------------~~-~l~~~~~l~G~~~G~~~~~~~~~~se~fg~~~~g 320 (424)
+ ++ .+.++-++.|+|--..+++-.+++=|....++-.
T Consensus 193 ~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llff~~q~l~GIG~Tpi~tlGisYiDDnvk~~~Sp 272 (735)
T KOG3626|consen 193 LEVIKQSVENPSSSLSFCCCNKSTNLCRPSPENSKREKESTSYPFLLFFLGQLLLGIGATPIFTLGISYIDDNVKKKNSP 272 (735)
T ss_pred hhhhhccccCCccccchhhccCCccccCCCCCcccccccCCchhHHHHHHHHHHhhcCCCCCccCCCccccccccccCCc
Confidence 0 11 3445667778888889999999999999999888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhh-hhhhhhhccCCCCCcccCCCCCCcccCCcchHHHHHHHHHHHHHHHH
Q 014462 321 ALYNFLTLASPAGSLIFSGVIASGIYDYYAEK-QAGLLWKYNGNMLPVSFRDQETPTCLGSICYSITCGIMAGLCIIAMV 399 (424)
Q Consensus 321 ~~~g~~~~~~~lgs~l~~~~l~g~l~d~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~c~g~~c~~~~f~i~a~~~~~~~~ 399 (424)
...|+++....+|-++ |=.+++++...+.+- .. + ..-...++.=+| +|...|++.+.+.++..+
T Consensus 273 lYlgi~~~~~~lGPai-GfllgS~~l~lYvD~~~~---------~---~~it~~DPrWIG--AWWlGFLi~g~~~~~~a~ 337 (735)
T KOG3626|consen 273 LYLGILYSMAILGPAI-GFLLGSFCLKLYVDFGLS---------P---IGITPTDPRWIG--AWWLGFLICGALLLFSAV 337 (735)
T ss_pred HHHHHHHHHHHhhhHH-HHHHHHHHHHeeeccccC---------C---CCCCCCCcchhh--HHHHHHHHHHHHHHHHHH
Confidence 8888888877777765 544444443333211 00 0 000111122223 488889999999888887
Q ss_pred HHHHHhhhh
Q 014462 400 MSLIVVHRT 408 (424)
Q Consensus 400 l~~~l~~~~ 408 (424)
..+.+-++.
T Consensus 338 p~f~fPk~l 346 (735)
T KOG3626|consen 338 PLFFFPKEL 346 (735)
T ss_pred HHHhCcccC
Confidence 777665443
No 270
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=86.14 E-value=36 Score=35.84 Aligned_cols=100 Identities=16% Similarity=0.164 Sum_probs=59.5
Q ss_pred HHHhhhhHhHHHHHHHHhhCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhccCCC-CCcc-cCCCC
Q 014462 296 GLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIASGIYDYYAEKQAGLLWKYNGNM-LPVS-FRDQE 373 (424)
Q Consensus 296 G~~~G~~~~~~~~~~se~fg~~~~g~~~g~~~~~~~lgs~l~~~~l~g~l~d~~~~~~~~~~~~~~~~~-~~~~-~~~~~ 373 (424)
.+..-.++....+.-+.+-.+.--|+-..++|+.+++|+-- -..++=++.|....++=. +.. .... ....+
T Consensus 416 sf~stvmFVai~AFharISDP~IGGTYMTLLNTvSNLGGtW-P~~~vL~lVD~fT~~~C~------~~~t~~~~c~~~~~ 488 (544)
T PF13000_consen 416 SFMSTVMFVAIMAFHARISDPAIGGTYMTLLNTVSNLGGTW-PRTFVLWLVDYFTVATCT------VPGTNSFSCSSDAE 488 (544)
T ss_pred HHHHHHHHHHHHHHHhhccCcccchHHHHHHHHHHhcCCCc-hHHHHHHHhhhccccccC------CCCCCCceeccHHH
Confidence 34444455555555566667777899999999999999983 333444777875432210 000 0000 01122
Q ss_pred CCcc---cCCcch--HHHHHHHHHHHHHHHHHHH
Q 014462 374 TPTC---LGSICY--SITCGIMAGLCIIAMVMSL 402 (424)
Q Consensus 374 ~~~c---~g~~c~--~~~f~i~a~~~~~~~~l~~ 402 (424)
...| .|.+|- +-.+++...+|++-.++.+
T Consensus 489 k~~Ct~~~GG~C~i~rDGYYi~~~lCvviGi~~~ 522 (544)
T PF13000_consen 489 KEQCTKAGGGTCVIIRDGYYITNILCVVIGIVLW 522 (544)
T ss_pred HHHHhhCCCCeEEEEeccchhhhHHHHHHHHHHH
Confidence 2357 377786 7788888888887555444
No 271
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=84.43 E-value=2 Score=45.24 Aligned_cols=48 Identities=13% Similarity=0.252 Sum_probs=40.8
Q ss_pred HHhcHHHHHHHcCCCchhH--HHHHHHHHhhhhhhhhhhhhhhhhhcccC
Q 014462 213 VIDNLGQICQSLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAY 260 (424)
Q Consensus 213 ~~~~l~~i~~~~g~s~~~~--~~sl~si~~~~gr~~~G~lsd~~g~k~~~ 260 (424)
+...++.+.+++|++++.. ++..--+..+++.|++|+++||+.+||..
T Consensus 30 l~pll~vy~kQLGl~p~~~Gtl~g~~P~v~~L~~P~~g~~Adr~r~~r~l 79 (618)
T KOG3762|consen 30 LFPLLAVYFKQLGLNPAVVGTLTGTLPLVEFLAAPLWGFLADRYRKRRPL 79 (618)
T ss_pred cchHHHHHHHHcCCCHHHhhhhhhHHHHHHHHhHHHHHHHHHHHHhcCch
Confidence 3446778889999998865 88888899999999999999999887765
No 272
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=80.72 E-value=37 Score=35.15 Aligned_cols=45 Identities=7% Similarity=0.036 Sum_probs=25.9
Q ss_pred HHHHHHHHHHHHhhhhHhHHHHHHHHhhCcchhhHHHHHHHHHHHHHHHH
Q 014462 287 EIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLI 336 (424)
Q Consensus 287 ~l~~~~~l~G~~~G~~~~~~~~~~se~fg~~~~g~~~g~~~~~~~lgs~l 336 (424)
..++..++.|++.|...+....+++ .||++. .+....+.++++.+
T Consensus 108 ~~~~~v~~~g~~~~~~q~s~~gla~-~fp~~~----~~a~~~G~g~aGv~ 152 (437)
T TIGR00939 108 TTMASVVIINSGMALLQGSLFGLAG-VFPSTY----SSAVMSGQGLAGVL 152 (437)
T ss_pred HHHHHHHHHHhhhhhhcccchhhcc-cCCHHH----HHHHHhcchhHHHH
Confidence 3344556667777777766665554 776543 34444455555554
No 273
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=72.71 E-value=32 Score=35.18 Aligned_cols=97 Identities=14% Similarity=0.127 Sum_probs=53.3
Q ss_pred HhhhhhhhhhhhhhhhhhcccCchhHHHHHHHHHHHHHHHHHHh-chhHHHHHHHHHHHHHhhhhHhHHHHHHHHhhCcc
Q 014462 239 WNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVMAFALLYYAI-GWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLK 317 (424)
Q Consensus 239 ~~~~gr~~~G~lsd~~g~k~~~~r~~~l~~~~~~~~~~~ll~~~-~~~~~l~~~~~l~G~~~G~~~~~~~~~~se~fg~~ 317 (424)
.+++-.+.+.++.+|+..+.++ .+..+++++++++.+. .+.+.-+++.++.+++.|..=...-.+ +..|+..
T Consensus 71 P~l~~Kl~aP~fi~~v~y~~Ri------~~~~~l~~~g~l~va~~~~v~~~l~Gv~las~ssg~GE~tfL~l-t~~y~~~ 143 (402)
T PF02487_consen 71 PSLLVKLIAPFFIHRVPYWIRI------LICVALSAAGMLLVAFSPSVWVRLLGVVLASLSSGLGEVTFLSL-THFYGKS 143 (402)
T ss_pred HHHHHHHHhHhhhhhccchHHH------HHHHHHHHHHHhheeeccchhHHHHHHHHHhhhhhhhHHHHHHH-HHhcCcc
Confidence 3444555666666666433222 4445667777776664 445555677888888877765544444 5577643
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 014462 318 SFGALYNFLTLASPAGSLIFSGVIASGIYD 347 (424)
Q Consensus 318 ~~g~~~g~~~~~~~lgs~l~~~~l~g~l~d 347 (424)
. .+-...+...++++ |....-.+.+
T Consensus 144 ~----l~~wssGTG~aGl~-Ga~~y~~lT~ 168 (402)
T PF02487_consen 144 S----LSAWSSGTGGAGLV-GALYYLGLTT 168 (402)
T ss_pred c----cccccCCcChhhHH-HHHHHHHHHH
Confidence 2 23333444445544 5444444443
No 274
>PF03547 Mem_trans: Membrane transport protein; InterPro: IPR004776 This entry represents a mostly uncharacterised family of membrane transport proteins found in eukaryotes, bacteria and archaea. Most characterised members of this family are the PIN components of auxin efflux systems from plants. These carriers are saturable, auxin-specific, and localized to the basal ends of auxin transport-competent cells [, ]. Plants typically posses several of these proteins, each displaying a unique tissue-specific expression pattern. They are expressed in almost all plant tissues including vascular tissues and roots, and influence many processes including the establishment of embryonic polarity, plant growth, apical hook formation in seedlings and the photo- and gravitrophic responses. These plant proteins are typically 600-700 amino acyl residues long and exhibit 8-12 transmembrane segments.; GO: 0055085 transmembrane transport, 0016021 integral to membrane
Probab=72.46 E-value=51 Score=33.03 Aligned_cols=21 Identities=5% Similarity=0.317 Sum_probs=13.6
Q ss_pred HHHhhhhHHHHHHHHHHHHhh
Q 014462 187 LPQALMKADFLLLFFSLVLAS 207 (424)
Q Consensus 187 ~~~~l~~~~fwll~~~~~~~~ 207 (424)
+++.+++|..|..+++..++.
T Consensus 238 ~~~~~~nP~~~a~~lgli~~~ 258 (385)
T PF03547_consen 238 ILKLFKNPPLIAIILGLIIGL 258 (385)
T ss_pred HHHHHhCcHHHHHHHHHHHHH
Confidence 456677777777766665543
No 275
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=71.21 E-value=9.3 Score=37.08 Aligned_cols=90 Identities=13% Similarity=0.125 Sum_probs=48.8
Q ss_pred HHHcCCCchhH---HHHHHHHHhhhhhhhhhhhhhhhhhcccCchhHHHHHHHHHHHHHHHHHHhchhHHHHHHHHHHHH
Q 014462 221 CQSLGYADTSI---YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVMAFALLYYAIGWPGEIYVTTVLVGL 297 (424)
Q Consensus 221 ~~~~g~s~~~~---~~sl~si~~~~gr~~~G~lsd~~g~k~~~~r~~~l~~~~~~~~~~~ll~~~~~~~~l~~~~~l~G~ 297 (424)
++.+|+...++ ++.-++-...+| .+.|-+.|+.||||.- ..-++...++++.=.......+.++.++.|+
T Consensus 64 YstYgFgkG~IgqLfiaGfgSsmLFG-tivgSLaDkqGRKrac------vtycitYiLsCiTKhSpqYkVLmVGR~LGGi 136 (454)
T KOG4332|consen 64 YSTYGFGKGDIGQLFIAGFGSSMLFG-TIVGSLADKQGRKRAC------VTYCITYILSCITKHSPQYKVLMVGRVLGGI 136 (454)
T ss_pred ehhcCccCCccceeeecccchHHHHH-HHHHHHHhhhccccce------eeehHHHHHHHHhhcCCceEEEeehhhhhhH
Confidence 45566655443 333333333333 4556688999999853 1111222222222112233467889999999
Q ss_pred HhhhhHhHHHH-HHHHhhCcc
Q 014462 298 SYGAHWAIVPA-AASELFGLK 317 (424)
Q Consensus 298 ~~G~~~~~~~~-~~se~fg~~ 317 (424)
.....++..-+ ++.|.-.++
T Consensus 137 aTsLLFSaFEsWliaEHnekr 157 (454)
T KOG4332|consen 137 ATSLLFSAFESWLIAEHNEKR 157 (454)
T ss_pred HHHHHHHHHHHHHHHHhhhcc
Confidence 88877765543 455555333
No 276
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=69.71 E-value=1.3e+02 Score=30.29 Aligned_cols=63 Identities=13% Similarity=0.207 Sum_probs=34.9
Q ss_pred hhHHHHHHHHHHHHhhhhHHHHH----hcHHHHHHHcCCCchhH--HHHHHH-HHhhhhhhhhhhhhhhh
Q 014462 192 MKADFLLLFFSLVLASGSGLTVI----DNLGQICQSLGYADTSI--YVSMIS-IWNFLGRVGGGYFSEAI 254 (424)
Q Consensus 192 ~~~~fwll~~~~~~~~~~~~~~~----~~l~~i~~~~g~s~~~~--~~sl~s-i~~~~gr~~~G~lsd~~ 254 (424)
+.++++.++++-+++..+..... .|+..=..++|+++... ..+... ++|.+-.+++|.+++..
T Consensus 117 ~~~~~~~L~~GRvlgGiaTSLLfS~FEsW~V~Eh~~~g~~~~~L~~tF~~~tf~~n~~vAI~aGv~a~~l 186 (354)
T PF05631_consen 117 HSSNYPVLLLGRVLGGIATSLLFSAFESWMVHEHNKRGFPQEWLSDTFSLATFFGNGVVAIGAGVVANVL 186 (354)
T ss_pred hccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHhHHHHHHHhHHHHHH
Confidence 34567888887766654433222 25443334578876533 333344 55666666666666554
No 277
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=57.14 E-value=95 Score=31.88 Aligned_cols=126 Identities=15% Similarity=0.177 Sum_probs=70.1
Q ss_pred hhhhHHHHHhcHHHHHHHcCCCchhHHHHHHHHHhhhhhhhhhhhhh-----hhhhcccCchhHHHHHHHHHHHHHHHHH
Q 014462 206 ASGSGLTVIDNLGQICQSLGYADTSIYVSMISIWNFLGRVGGGYFSE-----AIVRKFAYPRPVAMAVAQVVMAFALLYY 280 (424)
Q Consensus 206 ~~~~~~~~~~~l~~i~~~~g~s~~~~~~sl~si~~~~gr~~~G~lsd-----~~g~k~~~~r~~~l~~~~~~~~~~~ll~ 280 (424)
..|.-++.+...|.++++.|.|-++.-..-+.-+=+--.+++..+.| |+||||.+- .-.+.+....++++
T Consensus 42 lQGiP~GL~~~iP~lL~ak~vSyt~~a~fS~ay~P~sLKllWaPiVDs~y~k~~GrrksWv-----vp~q~llG~~mllL 116 (510)
T KOG3574|consen 42 LQGIPLGLIGAIPLLLQAKGVSYTSQAIFSFAYWPFSLKLLWAPIVDSVYSKRFGRRKSWV-----VPCQYLLGLFMLLL 116 (510)
T ss_pred HcCCchhHhhhhHHHhcCCCcchhhhhhhhhhhhHHHHHHHHHhhhHHHHHHhhcccccee-----eehHHHHHHHHHHH
Confidence 34555566668899999887775543222223344455788888999 999887552 22233333333333
Q ss_pred Hhc-h---------hH--HHHHHHHHHHHHhhhhHhHHHHHHHHhhCcchhhHHHHHHHHHHHHHHHH
Q 014462 281 AIG-W---------PG--EIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLI 336 (424)
Q Consensus 281 ~~~-~---------~~--~l~~~~~l~G~~~G~~~~~~~~~~se~fg~~~~g~~~g~~~~~~~lgs~l 336 (424)
+.. + +. .+....++.-|.-..+-...-...-.+..+++.|-+......+..+|-++
T Consensus 117 s~~v~~~~g~ng~~p~v~~lt~~f~LLnflaAtQDIAVDgwALtmLs~e~lgyaST~q~Vg~~~GyfL 184 (510)
T KOG3574|consen 117 SYLVDRGLGGNGGLPNVVALTLLFLLLNFLAATQDIAVDGWALTMLSRENLGYASTCQSVGQTAGYFL 184 (510)
T ss_pred hhCCCcccccCCCCcchHHHHHHHHHHHHHHhhhhhhhhHHHHHhcCHhhcCchhHHHHHHHhhhHHh
Confidence 311 0 11 12222233333333444444455666777788887777777777777665
No 278
>COG4858 Uncharacterized membrane-bound protein conserved in bacteria [Function unknown]
Probab=56.18 E-value=25 Score=31.72 Aligned_cols=84 Identities=12% Similarity=0.069 Sum_probs=41.4
Q ss_pred CCCCCchHHHHHHHHHHHHHHHHHHhhcccCCCCccc----CCCCchhHHHHHHHHHHHHHHHHHHHhhcccccchH---
Q 014462 2 ISANETSLIFLVAVGPSIVVMAFMFIVRPIGGHRQVR----LSDNTSFLFTYTVCLILAAYMLAVLLLEDLEVANQN--- 74 (424)
Q Consensus 2 ~~~~~~~~~llla~~p~~v~~~~~~~~r~~~~~~~~~----~~~~~~f~~~~~~~~~l~~~l~~~~~~~~~~~~s~~--- 74 (424)
|..|+..|=+..-++-.+|+-..|+..+..-|....+ +.-++.++. .+.++.+++.+.+. +.+.+-|-.
T Consensus 118 f~~nA~~~GlItlll~a~vgGfamy~my~y~yr~~ad~sqr~~~~K~~lv---~~~sm~lWi~v~i~-t~~lPtslN~~L 193 (226)
T COG4858 118 FQKNAQVYGLITLLLTAVVGGFAMYIMYYYAYRMRADNSQRPGTWKYLLV---AVLSMLLWIAVMIA-TVFLPTSLNPQL 193 (226)
T ss_pred HhcCCcchhHHHHHHHHHhhhHHHHHHHHHHHHhhcccccCCchHHHHHH---HHHHHHHHHHHHHH-HhhCCCcCCcCC
Confidence 4445555545444555556555555544322222111 122333333 66667777776643 445443321
Q ss_pred HHHHHHHHHHHHHHh
Q 014462 75 VLTVLAVGLIIIILL 89 (424)
Q Consensus 75 ~~~~~~~v~~~ll~~ 89 (424)
.-+...+++.+++.+
T Consensus 194 ~pi~l~IiGav~lal 208 (226)
T COG4858 194 PPIALTIIGAVILAL 208 (226)
T ss_pred chHHHHHHHHHHHHH
Confidence 225666777666655
No 279
>COG4603 ABC-type uncharacterized transport system, permease component [General function prediction only]
Probab=53.40 E-value=1.8e+02 Score=29.25 Aligned_cols=34 Identities=24% Similarity=0.453 Sum_probs=28.4
Q ss_pred HHHHHHHHHHHHHhhhhHhHHHHHHHHhhCcchh
Q 014462 286 GEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSF 319 (424)
Q Consensus 286 ~~l~~~~~l~G~~~G~~~~~~~~~~se~fg~~~~ 319 (424)
+......++.|+..|+.|+..|.+....|+.++.
T Consensus 112 ~l~~p~a~l~g~~~G~~wa~ipg~Lka~f~~nEV 145 (356)
T COG4603 112 WLALPLALLAGAAGGGLWALIPGLLKARFGVNEV 145 (356)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCccHH
Confidence 3445667788899999999999999999998873
No 280
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=49.02 E-value=2.5e+02 Score=27.00 Aligned_cols=93 Identities=13% Similarity=0.204 Sum_probs=42.4
Q ss_pred HHHHHHHHhhhhhhhhhhhhhhhhhcccCchhHHHHHHHHHHHHHHHHHHh---ch---hHHHHHHHHHHHHHhhhhHhH
Q 014462 232 YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVMAFALLYYAI---GW---PGEIYVTTVLVGLSYGAHWAI 305 (424)
Q Consensus 232 ~~sl~si~~~~gr~~~G~lsd~~g~k~~~~r~~~l~~~~~~~~~~~ll~~~---~~---~~~l~~~~~l~G~~~G~~~~~ 305 (424)
+..++-.+.++|-..-|..+-..-+||..-.. .+..+.++..++.++... .+ ...+++..++.|+|.=+..++
T Consensus 146 ~~I~fv~g~~~G~~~ig~~nkt~~kRk~fi~~-~~~~gi~~~~l~~~~~~~~g~~~~~~~~~f~I~~Fl~G~f~WgiQ~V 224 (267)
T PF07672_consen 146 FQILFVAGYFLGPFTIGLWNKTNYKRKPFIHF-IISLGIVFFVLSIVVVYFVGPGNAAGFAFFYIFGFLAGFFLWGIQGV 224 (267)
T ss_pred HHHHHHHHHhhhceeeccchhhhhhhhhHHHH-HHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHhhhHH
Confidence 55555666667777788775444444433110 112223333333333211 11 334667777777764333333
Q ss_pred HHHHHHHhh--CcchhhHHHHH
Q 014462 306 VPAAASELF--GLKSFGALYNF 325 (424)
Q Consensus 306 ~~~~~se~f--g~~~~g~~~g~ 325 (424)
.--.--|.= .+|+.|..+|+
T Consensus 225 iL~lPhEyK~~~pk~ig~~Fg~ 246 (267)
T PF07672_consen 225 ILNLPHEYKGYNPKKIGIQFGL 246 (267)
T ss_pred HhcChhhhcCCCcceehhHHHH
Confidence 333333332 23444444443
No 281
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=48.66 E-value=3.2e+02 Score=28.06 Aligned_cols=30 Identities=20% Similarity=0.180 Sum_probs=17.1
Q ss_pred HHHHHHHHHHHhhhhHhHHHHHHHHhhCcch
Q 014462 288 IYVTTVLVGLSYGAHWAIVPAAASELFGLKS 318 (424)
Q Consensus 288 l~~~~~l~G~~~G~~~~~~~~~~se~fg~~~ 318 (424)
..+..++.+++.|.......... ..+|.|+
T Consensus 120 t~~~vv~~~~a~a~~qgs~~G~a-~~~P~~y 149 (406)
T KOG1479|consen 120 TLIIVVLLNLANAVVQGSLYGLA-GLFPSEY 149 (406)
T ss_pred HHHHHHHHhhhhhhhccchhhhh-hcCCHHH
Confidence 34455566666666666555544 4455565
No 282
>PRK10263 DNA translocase FtsK; Provisional
Probab=46.65 E-value=2.2e+02 Score=33.68 Aligned_cols=18 Identities=11% Similarity=0.379 Sum_probs=10.7
Q ss_pred HHHHHHHHHHHHHHHhhhh
Q 014462 332 AGSLIFSGVIASGIYDYYA 350 (424)
Q Consensus 332 lgs~l~~~~l~g~l~d~~~ 350 (424)
.|+++ |-.+...++...|
T Consensus 142 gGGII-G~lLs~lL~~LfG 159 (1355)
T PRK10263 142 SGGVI-GSLLSTTLQPLLH 159 (1355)
T ss_pred ccchH-HHHHHHHHHHHHh
Confidence 35555 6666666666555
No 283
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=43.55 E-value=50 Score=27.12 Aligned_cols=17 Identities=18% Similarity=0.321 Sum_probs=11.3
Q ss_pred hhhhhhhhhhhhhhhhh
Q 014462 240 NFLGRVGGGYFSEAIVR 256 (424)
Q Consensus 240 ~~~gr~~~G~lsd~~g~ 256 (424)
+.+...+.||+.||+-.
T Consensus 55 GilVGa~iG~llD~~ag 71 (116)
T COG5336 55 GILVGAGIGWLLDKFAG 71 (116)
T ss_pred HHHHHHHHHHHHHHhcC
Confidence 44445566888899854
No 284
>TIGR01666 YCCS hypothetical membrane protein, TIGR01666. This model represents a clade of sequences from gamma and beta proteobacteria. These proteins are 700 amino acids long and many have been annotated as putative membrane proteins. The gene from Salmonella has been annotated as a putative efflux transporter. The gene from E. coli has the name yccS.
Probab=42.79 E-value=2.7e+02 Score=30.78 Aligned_cols=29 Identities=7% Similarity=0.032 Sum_probs=15.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhhHHH
Q 014462 384 SITCGIMAGLCIIAMVMSLIVVHRTKSVY 412 (424)
Q Consensus 384 ~~~f~i~a~~~~~~~~l~~~l~~~~~~~~ 412 (424)
+..+++.|++.-...-+.+....+.|+..
T Consensus 132 ~pllll~GalwY~llsl~~~~l~p~rp~q 160 (704)
T TIGR01666 132 QPVMLLCGTLWYSVVTLIVHLFFPNRPVQ 160 (704)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCChHH
Confidence 34445555555555555555555665544
No 285
>COG1079 Uncharacterized ABC-type transport system, permease component [General function prediction only]
Probab=41.04 E-value=3.6e+02 Score=26.51 Aligned_cols=49 Identities=16% Similarity=0.091 Sum_probs=33.6
Q ss_pred HHHHHhhhhHhHHHHHHHHhhCcchhhHHHHHHHHHHHHHHHHHHHHHHH
Q 014462 294 LVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIAS 343 (424)
Q Consensus 294 l~G~~~G~~~~~~~~~~se~fg~~~~g~~~g~~~~~~~lgs~l~~~~l~g 343 (424)
+.|...|...+...+..+.....++.-+..++...+..+..++ +..+.|
T Consensus 67 ~~a~l~g~l~~ll~a~~ti~l~~nqiisG~alnl~a~Glt~fl-~~~~~~ 115 (304)
T COG1079 67 LAAALVGALFGLLHAFLTIKLRANQIISGLALNLLASGLTAFL-GQSIFG 115 (304)
T ss_pred HHHHHHHHHHHHHHHHHHHhhccccchhHHHHHHHHHHHHHHH-HHHHhc
Confidence 4445556666777788888888888877777777777766665 444444
No 286
>PF12805 FUSC-like: FUSC-like inner membrane protein yccS
Probab=39.36 E-value=3.5e+02 Score=25.92 Aligned_cols=29 Identities=10% Similarity=0.078 Sum_probs=15.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhhHHH
Q 014462 384 SITCGIMAGLCIIAMVMSLIVVHRTKSVY 412 (424)
Q Consensus 384 ~~~f~i~a~~~~~~~~l~~~l~~~~~~~~ 412 (424)
+..+++.|+++-....+.++...++|+..
T Consensus 74 ~~~l~~~Gglwy~~lsl~~~~l~p~r~~r 102 (284)
T PF12805_consen 74 HALLFLAGGLWYLLLSLLWWPLRPYRPVR 102 (284)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCHHH
Confidence 44455556555555555555555655543
No 287
>TIGR01667 YCCS_YHJK integral membrane protein, YccS/YhfK family. TMHMM on members of this model shows a consensus of 11 transmembrane helices separated into two clusters, an N-terminal cluster of 6 and a central cluster of 5. This would indicate two non-membrane domains one on each side of the membrane
Probab=39.07 E-value=3.1e+02 Score=30.32 Aligned_cols=35 Identities=9% Similarity=0.038 Sum_probs=17.3
Q ss_pred HHHHHHHHHHHHH--HHhchhHHHHHHHHHHHHHhhh
Q 014462 267 AVAQVVMAFALLY--YAIGWPGEIYVTTVLVGLSYGA 301 (424)
Q Consensus 267 ~~~~~~~~~~~ll--~~~~~~~~l~~~~~l~G~~~G~ 301 (424)
.++.++.+++.+. +.+..++.+....++.+|+.+.
T Consensus 61 ~it~~~f~i~sl~v~ll~~~p~~~~~~l~~~tf~~~m 97 (701)
T TIGR01667 61 IITLSCFSIASFLVQLLFPKPWLFPFLLTLLTFGFIL 97 (701)
T ss_pred HHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHH
Confidence 4444444444333 2345556666666555555443
No 288
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=36.34 E-value=1.1e+02 Score=25.28 Aligned_cols=32 Identities=16% Similarity=0.110 Sum_probs=22.7
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh
Q 014462 318 SFGALYNFLTLASPAGSLIFSGVIASGIYDYYA 350 (424)
Q Consensus 318 ~~g~~~g~~~~~~~lgs~l~~~~l~g~l~d~~~ 350 (424)
..+.+..+-...--+++.+ -+.+.|++.|++.
T Consensus 39 ~k~~~~a~klssefIsGil-VGa~iG~llD~~a 70 (116)
T COG5336 39 IKGYAQAFKLSSEFISGIL-VGAGIGWLLDKFA 70 (116)
T ss_pred hhhhhhhHHHHHHHHHHHH-HHHHHHHHHHHhc
Confidence 3455566655666677776 4678899999987
No 289
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=36.02 E-value=2.5e+02 Score=27.56 Aligned_cols=41 Identities=15% Similarity=0.275 Sum_probs=34.3
Q ss_pred HHHHHHHHHHHhhhhHhHHHHHHHHhhCcchhhHHHHHHHH
Q 014462 288 IYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTL 328 (424)
Q Consensus 288 l~~~~~l~G~~~G~~~~~~~~~~se~fg~~~~g~~~g~~~~ 328 (424)
-.++..++-.|.|..|+.+.-+=+++.|.+.+++..|+.-.
T Consensus 347 s~i~F~~~E~cvGlfwPSimkmRsqyIPEearstimNfFRv 387 (454)
T KOG4332|consen 347 SLIGFCLFEACVGLFWPSIMKMRSQYIPEEARSTIMNFFRV 387 (454)
T ss_pred HHHHHHHHHHHHhhcchHHHHHHHhhCCHHHHhhhhhheec
Confidence 35677777889999999999999999999999998887443
No 290
>PF02990 EMP70: Endomembrane protein 70; InterPro: IPR004240 The transmembrane 9 superfamily protein (TM9SF) may function as a channel or small molecule transporter. Proteins in this group are endosomal integral membrane proteins.; GO: 0016021 integral to membrane
Probab=34.66 E-value=3.9e+02 Score=28.29 Aligned_cols=67 Identities=10% Similarity=0.185 Sum_probs=32.8
Q ss_pred hhhhHHHHHHHHHHHHhhhhHHHHHhcHHHHHHHcCCC-c--hhH----HHHHHHHHhhhhhhhhhhhhhhhhhc
Q 014462 190 ALMKADFLLLFFSLVLASGSGLTVIDNLGQICQSLGYA-D--TSI----YVSMISIWNFLGRVGGGYFSEAIVRK 257 (424)
Q Consensus 190 ~l~~~~fwll~~~~~~~~~~~~~~~~~l~~i~~~~g~s-~--~~~----~~sl~si~~~~gr~~~G~lsd~~g~k 257 (424)
++|.|+ ....++.++|.|..+..+.....+....|.- . ... .+.++.+.+.++...++.+.-.++.|
T Consensus 254 VFR~P~-~~~lls~lvG~G~Qll~~~~~~~~~a~~g~~~~~~rg~l~t~~i~~y~~~~~iaGy~S~~~yk~~~g~ 327 (521)
T PF02990_consen 254 VFRPPK-HPMLLSALVGTGIQLLFMALVTLFFAALGFLSPNNRGSLLTAAIILYALTSFIAGYVSARLYKSFGGK 327 (521)
T ss_pred HhcCcC-CchHHHhHhcchhhhhHHHHHHHHHHHhhhccccCcchHHHHHHHHHHHHhhHHHHHHHHHHHHcCCC
Confidence 555555 3444555666666665554444444444532 1 122 44444555555555555554444444
No 291
>PF14143 YrhC: YrhC-like protein
Probab=32.20 E-value=1.2e+02 Score=22.97 Aligned_cols=27 Identities=19% Similarity=0.322 Sum_probs=19.7
Q ss_pred CCCCchhHHHHHHHHHHHHHHHHHHHhhcc
Q 014462 39 LSDNTSFLFTYTVCLILAAYMLAVLLLEDL 68 (424)
Q Consensus 39 ~~~~~~f~~~~~~~~~l~~~l~~~~~~~~~ 68 (424)
-.|.+||.+ +.+++..|+.+-.++.+.
T Consensus 7 i~DyKrf~~---vLLAvs~FlYiG~viP~~ 33 (72)
T PF14143_consen 7 IEDYKRFAF---VLLAVSTFLYIGTVIPIG 33 (72)
T ss_pred HHHHHHHHH---HHHHHHHHHHHHhhCCcc
Confidence 358899988 667888888877765533
No 292
>KOG3880 consensus Predicted small molecule transporter involved in cellular pH homeostasis (Batten disease protein in human) [General function prediction only]
Probab=31.18 E-value=5.6e+02 Score=25.75 Aligned_cols=102 Identities=16% Similarity=0.187 Sum_probs=61.1
Q ss_pred HHHHHHHHHhhhhhhhhhhhhhhhhhcccCchhHHHHHHHHHHHHHHHH---HHhc-hhHHHHHHHHHHHHHhhhhHhHH
Q 014462 231 IYVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVMAFALLY---YAIG-WPGEIYVTTVLVGLSYGAHWAIV 306 (424)
Q Consensus 231 ~~~sl~si~~~~gr~~~G~lsd~~g~k~~~~r~~~l~~~~~~~~~~~ll---~~~~-~~~~l~~~~~l~G~~~G~~~~~~ 306 (424)
++-.++.++-++.|--.-.. .+|..+.+.+.+.+..+-.++ +.+. +.+...+..+.-|+-.|+.+.-+
T Consensus 292 wyqvlYQlGVFiSRSS~~~~--------~~p~l~~LailQ~vNl~ff~~~a~~~ftpsi~ivf~lI~~EGLlGGasYVNT 363 (409)
T KOG3880|consen 292 WYQVLYQLGVFISRSSINLF--------TMPYLWLLAILQFVNLLFFLLQAWYWFTPSIWIVFALILFEGLLGGASYVNT 363 (409)
T ss_pred hhheeeeeeEEEEeccceEE--------echHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhcCchHHHHH
Confidence 36777777776655433222 234345556666555443332 2223 33334444445588778877777
Q ss_pred HHHHHHhhCcchhhHHHHHHHHHHHHHHHHHHHHH
Q 014462 307 PAAASELFGLKSFGALYNFLTLASPAGSLIFSGVI 341 (424)
Q Consensus 307 ~~~~se~fg~~~~g~~~g~~~~~~~lgs~l~~~~l 341 (424)
.--+.+-..+++|-.+.+....+-.+|-.+ +..+
T Consensus 364 f~~i~~e~~pd~rEfamsavs~sDS~Gi~l-A~~l 397 (409)
T KOG3880|consen 364 FHNIHKETEPDVREFAMSAVSISDSIGIFL-AGLL 397 (409)
T ss_pred HHHHhhcCCchHHHHhHhhheecchhhHHH-HHHH
Confidence 767777777888888888888887777664 4443
No 293
>PF06912 DUF1275: Protein of unknown function (DUF1275); InterPro: IPR010699 This family consists of several hypothetical bacterial proteins of around 200 residues in length. The function of this family is unknown although a few members are thought to be membrane proteins.
Probab=30.28 E-value=4.1e+02 Score=23.99 Aligned_cols=23 Identities=9% Similarity=0.119 Sum_probs=12.1
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhh
Q 014462 328 LASPAGSLIFSGVIASGIYDYYA 350 (424)
Q Consensus 328 ~~~~lgs~l~~~~l~g~l~d~~~ 350 (424)
-...+.+++.|..+++.+++..+
T Consensus 168 ~~~~i~~f~~Ga~~ga~l~~~~~ 190 (209)
T PF06912_consen 168 YLLIILSFFIGAILGALLYRRLG 190 (209)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHh
Confidence 34444445445555556666655
No 294
>PF01102 Glycophorin_A: Glycophorin A; InterPro: IPR001195 Proteins in this group are responsible for the molecular basis of the blood group antigens, surface markers on the outside of the red blood cell membrane. Most of these markers are proteins, but some are carbohydrates attached to lipids or proteins [Reid M.E., Lomas-Francis C. The Blood Group Antigen FactsBook Academic Press, London / San Diego, (1997)]. Glycophorin A (PAS-2) and glycophorin B (PAS-3) belong to the MNS blood group system and are associated with antigens that include M/N, S/s, U, He, Mi(a), M(c), Vw, Mur, M(g), Vr, M(e), Mt(a), St(a), Ri(a), Cl(a), Ny(a), Hut, Hil, M(v), Far, Mit, Dantu, Hop, Nob, En(a), ENKT, amongst others. Glycophorin A is the major sialoglycoprotein of the erythrocyte membrane []. Structurally, glycophorin A consists of an N-terminal extracellular domain, heavily glycosylated on serine and threonine residues, followed by a transmembrane region and a C-terminal cytoplasmic domain. Other glycophorins in this entry such as Glycophorin B and Glycophorin E represent minor sialoglycoproteins in the erythrocyte membrane.; GO: 0016021 integral to membrane; PDB: 2KPF_B 1AFO_B 2KPE_A.
Probab=29.89 E-value=69 Score=27.02 Aligned_cols=28 Identities=29% Similarity=0.424 Sum_probs=13.7
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhhhhH
Q 014462 383 YSITCGIMAGLCIIAMVMSLIVVHRTKS 410 (424)
Q Consensus 383 ~~~~f~i~a~~~~~~~~l~~~l~~~~~~ 410 (424)
....|.+++++.++.+++++++++++|+
T Consensus 67 ~~Ii~gv~aGvIg~Illi~y~irR~~Kk 94 (122)
T PF01102_consen 67 IGIIFGVMAGVIGIILLISYCIRRLRKK 94 (122)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHS--
T ss_pred eehhHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 3445666666555555555555444444
No 295
>PF12832 MFS_1_like: MFS_1 like family
Probab=27.18 E-value=2.8e+02 Score=20.98 Aligned_cols=30 Identities=10% Similarity=0.105 Sum_probs=23.6
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh
Q 014462 320 GALYNFLTLASPAGSLIFSGVIASGIYDYYA 350 (424)
Q Consensus 320 g~~~g~~~~~~~lgs~l~~~~l~g~l~d~~~ 350 (424)
..-.|++....++-..+ ++++.|.+.|+.+
T Consensus 34 ~~~iGil~~i~~~~~~~-~~pl~g~laDk~~ 63 (77)
T PF12832_consen 34 PSQIGILSAIRPLIRFL-APPLWGFLADKFG 63 (77)
T ss_pred HHHHHHHHHHHHHHHHH-HHHHHHHHHHHHC
Confidence 34556666677777886 8999999999988
No 296
>PF11947 DUF3464: Protein of unknown function (DUF3464); InterPro: IPR021855 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 137 to 196 amino acids in length.
Probab=26.77 E-value=1.5e+02 Score=26.00 Aligned_cols=32 Identities=16% Similarity=0.173 Sum_probs=21.4
Q ss_pred hHHHHHHHHhhCcchhhHHHHHHHHHHHHHHH
Q 014462 304 AIVPAAASELFGLKSFGALYNFLTLASPAGSL 335 (424)
Q Consensus 304 ~~~~~~~se~fg~~~~g~~~g~~~~~~~lgs~ 335 (424)
.+.+.+.|.-+..++-|...|+-.+-..++-+
T Consensus 113 GisYGilSaSWD~~r~GSllG~~e~~~N~~r~ 144 (153)
T PF11947_consen 113 GISYGILSASWDPEREGSLLGWEEFKRNWGRM 144 (153)
T ss_pred hhhhhhcccccCCCCCCCcccHHHHHHhHHHH
Confidence 45666777777777678777776666655443
No 297
>PTZ00370 STEVOR; Provisional
Probab=26.61 E-value=2.9e+02 Score=26.88 Aligned_cols=34 Identities=15% Similarity=0.360 Sum_probs=26.7
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHh
Q 014462 383 YSITCGIMAGLCIIAMVMSLIVVHRTKSVYAQLY 416 (424)
Q Consensus 383 ~~~~f~i~a~~~~~~~~l~~~l~~~~~~~~~~~~ 416 (424)
|..+-+++..+.++-.++-.|+.+|+++.|+.-.
T Consensus 257 ygiaalvllil~vvliilYiwlyrrRK~swkhe~ 290 (296)
T PTZ00370 257 YGIAALVLLILAVVLIILYIWLYRRRKNSWKHEC 290 (296)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHH
Confidence 7777777777788878888888888888886443
No 298
>PRK03612 spermidine synthase; Provisional
Probab=25.84 E-value=8.1e+02 Score=25.92 Aligned_cols=62 Identities=6% Similarity=-0.027 Sum_probs=34.5
Q ss_pred HHHHHHHHHHHHhhhhHHHHHhcHHHHHHH--cCCCch-hHHHHHHHHHhhhhhhhhhhhhhhhh
Q 014462 194 ADFLLLFFSLVLASGSGLTVIDNLGQICQS--LGYADT-SIYVSMISIWNFLGRVGGGYFSEAIV 255 (424)
Q Consensus 194 ~~fwll~~~~~~~~~~~~~~~~~l~~i~~~--~g~s~~-~~~~sl~si~~~~gr~~~G~lsd~~g 255 (424)
..++.++++.+|+.+......-.+.++..+ ..++.. ..++.-+++++.+++-+......++.
T Consensus 18 ~l~~~~f~sg~~~L~yEv~~~r~l~~~~G~s~~~~~~ii~~fl~glalGs~l~~~~~~~~~~~~~ 82 (521)
T PRK03612 18 LLLAAVFVCAACGLVYELLLGTLASYLLGDSVTQFSTVIGLMLFAMGVGALLSKYLLRDAAAGFV 82 (521)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHH
Confidence 345677777777777766666555555422 233433 33666666666666554444444443
No 299
>PF07214 DUF1418: Protein of unknown function (DUF1418); InterPro: IPR010815 This family consists of several hypothetical Enterobacterial proteins of around 100 residues in length. Members of this family are often described as YbjC. In Escherichia coli the ybjC gene is located downstream of nfsA (which encodes the major oxygen-insensitive nitroreductase). It is thought that nfsA and ybjC form an operon an its promoter is a class I SoxS-dependent promoter []. The function of this family is unknown.
Probab=23.78 E-value=1.5e+02 Score=23.79 Aligned_cols=28 Identities=14% Similarity=0.216 Sum_probs=18.1
Q ss_pred cchHHHHHHHHHHHHHHHhhhhHhhhhh
Q 014462 71 ANQNVLTVLAVGLIIIILLPVTIPVVLV 98 (424)
Q Consensus 71 ~s~~~~~~~~~v~~~ll~~Pl~i~~~~~ 98 (424)
++........+..-+.+++|.++.+-++
T Consensus 39 l~~~~aai~MIf~Gi~lMlPAav~ivWR 66 (96)
T PF07214_consen 39 LSTPTAAIAMIFVGIGLMLPAAVNIVWR 66 (96)
T ss_pred ccCchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3445555666666677888887776654
No 300
>COG3619 Predicted membrane protein [Function unknown]
Probab=23.34 E-value=6.2e+02 Score=23.71 Aligned_cols=59 Identities=19% Similarity=0.173 Sum_probs=23.9
Q ss_pred cHHHHHHHcCCCc-hhHHHHHHHHHhhhhhhhhhhhhhhhhhcccCchhHHHHHHHHHHHHH
Q 014462 216 NLGQICQSLGYAD-TSIYVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVMAFA 276 (424)
Q Consensus 216 ~l~~i~~~~g~s~-~~~~~sl~si~~~~gr~~~G~lsd~~g~k~~~~r~~~l~~~~~~~~~~ 276 (424)
|.-+..-++.-++ ......+..+..++.....+.+.-|..+|. ..+.+..+..++.+..
T Consensus 42 N~v~~gi~l~~~~~~~a~~~~~pii~Fv~Gv~~~~~~~r~~~~~--~~~~l~~~~~ll~~~v 101 (226)
T COG3619 42 NLVLLGIELAEGDAALAVLLLLPILAFVLGVAAAELISRRATRS--FIPVLLLVSLLLALIA 101 (226)
T ss_pred cHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc--chHHHHHHHHHHHHHH
Confidence 5555554433222 233333333333332344444444554442 2334444444443333
No 301
>PRK06041 flagellar assembly protein J; Reviewed
Probab=23.19 E-value=2.6e+02 Score=30.02 Aligned_cols=28 Identities=7% Similarity=0.134 Sum_probs=15.1
Q ss_pred CCCCCchHHHHHHHHHHHHHHHHHHhhc
Q 014462 2 ISANETSLIFLVAVGPSIVVMAFMFIVR 29 (424)
Q Consensus 2 ~~~~~~~~~llla~~p~~v~~~~~~~~r 29 (424)
+++|+....++..++-.++++.++..+.
T Consensus 214 ~g~~~~~l~~~~~l~ip~~~~~fi~li~ 241 (553)
T PRK06041 214 TGTDPTTTLSLSLFLFLFIEVGGVYVIK 241 (553)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3455544444444444456666666655
No 302
>PF06645 SPC12: Microsomal signal peptidase 12 kDa subunit (SPC12); InterPro: IPR009542 This family consists of several microsomal signal peptidase 12 kDa subunit proteins. Translocation of polypeptide chains across the endoplasmic reticulum (ER) membrane is triggered by signal sequences. Subsequently, signal recognition particle interacts with its membrane receptor and the ribosome-bound nascent chain is targeted to the ER where it is transferred into a protein-conducting channel. At some point, a second signal sequence recognition event takes place in the membrane and translocation of the nascent chain through the membrane occurs. The signal sequence of most secretory and membrane proteins is cleaved off at this stage. Cleavage occurs by the signal peptidase complex (SPC) as soon as the lumenal domain of the translocating polypeptide is large enough to expose its cleavage site to the enzyme. The signal peptidase complex is possibly also involved in proteolytic events in the ER membrane other than the processing of the signal sequence, for example the further digestion of the cleaved signal peptide or the degradation of membrane proteins. Mammalian signal peptidase is as a complex of five different polypeptide chains. This family represents the 12 kDa subunit (SPC12).; GO: 0008233 peptidase activity, 0006465 signal peptide processing, 0005787 signal peptidase complex, 0016021 integral to membrane
Probab=22.67 E-value=3.5e+02 Score=20.60 Aligned_cols=22 Identities=14% Similarity=0.137 Sum_probs=11.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhh
Q 014462 325 FLTLASPAGSLIFSGVIASGIYDY 348 (424)
Q Consensus 325 ~~~~~~~lgs~l~~~~l~g~l~d~ 348 (424)
+......+++++ ..+.|++.+.
T Consensus 12 l~~~il~~~~ii--sfi~Gy~~q~ 33 (76)
T PF06645_consen 12 LMQYILIISAII--SFIVGYITQS 33 (76)
T ss_pred HHHHHHHHHHHH--HHHHHHHHHH
Confidence 333444455553 4677877654
No 303
>PF15099 PIRT: Phosphoinositide-interacting protein family
Probab=22.64 E-value=1.3e+02 Score=25.44 Aligned_cols=30 Identities=7% Similarity=0.004 Sum_probs=17.9
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhhhhHHH
Q 014462 383 YSITCGIMAGLCIIAMVMSLIVVHRTKSVY 412 (424)
Q Consensus 383 ~~~~f~i~a~~~~~~~~l~~~l~~~~~~~~ 412 (424)
+..+|+-++.+.++...++|..+.|+|+..
T Consensus 83 ~G~vlLs~GLmlL~~~alcW~~~~rkK~~k 112 (129)
T PF15099_consen 83 FGPVLLSLGLMLLACSALCWKPIIRKKKKK 112 (129)
T ss_pred ehHHHHHHHHHHHHhhhheehhhhHhHHHH
Confidence 556677777666655556666555554433
No 304
>PF02990 EMP70: Endomembrane protein 70; InterPro: IPR004240 The transmembrane 9 superfamily protein (TM9SF) may function as a channel or small molecule transporter. Proteins in this group are endosomal integral membrane proteins.; GO: 0016021 integral to membrane
Probab=21.52 E-value=3.1e+02 Score=29.10 Aligned_cols=29 Identities=21% Similarity=0.356 Sum_probs=11.7
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 014462 319 FGALYNFLTLASPAGSLIFSGVIASGIYDY 348 (424)
Q Consensus 319 ~g~~~g~~~~~~~lgs~l~~~~l~g~l~d~ 348 (424)
+|...........+.+.+ +++..+.+|..
T Consensus 295 rg~l~t~~i~~y~~~~~i-aGy~S~~~yk~ 323 (521)
T PF02990_consen 295 RGSLLTAAIILYALTSFI-AGYVSARLYKS 323 (521)
T ss_pred cchHHHHHHHHHHHHhhH-HHHHHHHHHHH
Confidence 344444333334444433 34444444433
No 305
>KOG3097 consensus Predicted membrane protein [Function unknown]
Probab=21.07 E-value=1.6e+02 Score=29.52 Aligned_cols=58 Identities=16% Similarity=0.212 Sum_probs=32.8
Q ss_pred hhhhhhhhhhhhhcccCchhHHHHHHHHHHHHHHHHH-Hh---chhHHHHHHHHHHHHHhhhhHhHHHHHHH
Q 014462 244 RVGGGYFSEAIVRKFAYPRPVAMAVAQVVMAFALLYY-AI---GWPGEIYVTTVLVGLSYGAHWAIVPAAAS 311 (424)
Q Consensus 244 r~~~G~lsd~~g~k~~~~r~~~l~~~~~~~~~~~ll~-~~---~~~~~l~~~~~l~G~~~G~~~~~~~~~~s 311 (424)
.++.+.+..++|.|..+ .++ .....++ +. .....++-.....|++.|..|+..-++++
T Consensus 75 ~m~~~~~Ir~~g~K~tm------~la----v~~Y~lyiA~Nl~pr~~tlVPa~~~~G~aa~p~W~SkgtYlT 136 (390)
T KOG3097|consen 75 SMFMPLLIRFLGTKWTM------VLA----VFPYALYIAANLEPRYETLVPAGLVLGMAAGPIWASKGTYLT 136 (390)
T ss_pred HHHHHHHHHHHhhHHHH------HHH----HHHHHHHHHhhcchhHHhhccHHHhhccccccccccCcceec
Confidence 33444777788887533 222 2222222 22 22345677888889999888875544443
No 306
>KOG2927 consensus Membrane component of ER protein translocation complex [Intracellular trafficking, secretion, and vesicular transport]
Probab=20.11 E-value=1.7e+02 Score=29.19 Aligned_cols=24 Identities=13% Similarity=0.126 Sum_probs=10.0
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHh
Q 014462 382 CYSITCGIMAGLCIIAMVMSLIVV 405 (424)
Q Consensus 382 c~~~~f~i~a~~~~~~~~l~~~l~ 405 (424)
|+-..+++++++=++.+++++++.
T Consensus 227 gfl~~IlvLaIvRlILF~I~~il~ 250 (372)
T KOG2927|consen 227 GFLAFILVLAIVRLILFGITWILT 250 (372)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHh
Confidence 343444444444444444444433
No 307
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=20.05 E-value=4.3e+02 Score=20.61 Aligned_cols=25 Identities=20% Similarity=0.234 Sum_probs=18.7
Q ss_pred HHHHHHHHhhhhhhhhhhhhhhhhh
Q 014462 232 YVSMISIWNFLGRVGGGYFSEAIVR 256 (424)
Q Consensus 232 ~~sl~si~~~~gr~~~G~lsd~~g~ 256 (424)
......++..+|....|++.|..+.
T Consensus 92 ~~~~~~~g~~~~~~~~~~~~~~~~~ 116 (141)
T TIGR00880 92 MSAGIALGPLLGPPLGGVLAQFLGW 116 (141)
T ss_pred HHHhHHHHHHHhHHhHHHHhcccch
Confidence 5556677888888888888877654
Done!