Query 014472
Match_columns 424
No_of_seqs 676 out of 4000
Neff 10.9
Searched_HMMs 29240
Date Mon Mar 25 12:11:45 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/014472.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/014472hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2xyi_A Probable histone-bindin 100.0 4.2E-67 1.4E-71 496.9 38.3 410 5-415 9-419 (430)
2 4gqb_B Methylosome protein 50; 100.0 1.7E-43 5.8E-48 324.0 36.9 254 121-410 78-335 (344)
3 3ow8_A WD repeat-containing pr 100.0 7.4E-41 2.5E-45 304.1 41.0 286 43-405 34-320 (321)
4 2ynn_A Coatomer subunit beta'; 100.0 2.7E-41 9.3E-46 304.8 36.6 251 122-409 10-262 (304)
5 4g56_B MGC81050 protein; prote 100.0 1.7E-41 5.9E-46 312.9 34.8 255 120-407 89-344 (357)
6 1vyh_C Platelet-activating fac 100.0 4.8E-41 1.7E-45 315.9 35.5 246 121-405 146-410 (410)
7 3fm0_A Protein CIAO1; WDR39,SG 100.0 2.6E-40 8.9E-45 303.8 36.3 306 43-409 18-338 (345)
8 1vyh_C Platelet-activating fac 100.0 2.6E-40 8.9E-45 310.9 36.7 249 121-408 104-371 (410)
9 3ow8_A WD repeat-containing pr 100.0 2.9E-40 1E-44 300.1 33.4 253 119-408 26-281 (321)
10 1got_B GT-beta; complex (GTP-b 100.0 4.9E-39 1.7E-43 294.7 39.5 246 121-403 93-340 (340)
11 2pm7_B Protein transport prote 100.0 2.6E-39 8.8E-44 290.8 35.1 260 121-406 5-285 (297)
12 3iz6_a 40S ribosomal protein R 100.0 3.5E-39 1.2E-43 300.2 36.4 262 121-407 104-376 (380)
13 2ynn_A Coatomer subunit beta'; 100.0 1.6E-38 5.6E-43 286.6 39.1 250 120-406 50-302 (304)
14 2pbi_B Guanine nucleotide-bind 100.0 3.7E-38 1.2E-42 290.4 41.3 249 122-403 103-354 (354)
15 1got_B GT-beta; complex (GTP-b 100.0 1.1E-38 3.8E-43 292.4 36.6 251 121-408 51-303 (340)
16 4gqb_B Methylosome protein 50; 100.0 1.6E-39 5.4E-44 297.7 29.7 262 123-409 28-292 (344)
17 3frx_A Guanine nucleotide-bind 100.0 1.1E-38 3.7E-43 289.7 34.8 272 116-407 7-318 (319)
18 3fm0_A Protein CIAO1; WDR39,SG 100.0 5.6E-39 1.9E-43 294.9 32.3 274 116-407 5-284 (345)
19 3iz6_a 40S ribosomal protein R 100.0 7E-39 2.4E-43 298.2 33.4 258 120-408 61-331 (380)
20 4g56_B MGC81050 protein; prote 100.0 4.9E-39 1.7E-43 296.5 30.5 258 122-409 39-304 (357)
21 2pbi_B Guanine nucleotide-bind 100.0 8E-38 2.7E-42 288.1 37.9 255 121-408 60-317 (354)
22 2hes_X YDR267CP; beta-propelle 100.0 6.7E-38 2.3E-42 285.9 35.0 259 124-406 57-328 (330)
23 3bg1_A Protein SEC13 homolog; 100.0 2.2E-39 7.7E-44 293.8 24.3 260 122-405 10-292 (316)
24 1nr0_A Actin interacting prote 100.0 6.8E-38 2.3E-42 309.5 36.6 263 122-409 56-358 (611)
25 2j04_B YDR362CP, TAU91; beta p 100.0 6.8E-38 2.3E-42 301.1 34.7 330 40-407 132-518 (524)
26 2hes_X YDR267CP; beta-propelle 100.0 1.4E-37 4.8E-42 283.8 33.6 265 121-407 10-281 (330)
27 4ery_A WD repeat-containing pr 100.0 1.6E-36 5.6E-41 274.6 38.8 260 120-405 18-311 (312)
28 2xzm_R RACK1; ribosome, transl 100.0 2.8E-36 9.6E-41 276.8 40.2 263 119-407 70-341 (343)
29 2pm9_A Protein WEB1, protein t 100.0 6.1E-38 2.1E-42 295.3 29.1 265 121-410 63-341 (416)
30 4e54_B DNA damage-binding prot 100.0 4.7E-38 1.6E-42 298.1 28.3 269 121-409 115-433 (435)
31 4aow_A Guanine nucleotide-bind 100.0 8E-37 2.7E-41 279.6 34.4 275 114-408 26-339 (340)
32 3i2n_A WD repeat-containing pr 100.0 2.7E-36 9.4E-41 277.8 38.0 308 41-407 18-354 (357)
33 2pm9_A Protein WEB1, protein t 100.0 2.5E-38 8.4E-43 298.0 24.6 337 21-407 47-415 (416)
34 1erj_A Transcriptional repress 100.0 1.6E-36 5.5E-41 283.6 36.0 263 116-408 55-343 (393)
35 1erj_A Transcriptional repress 100.0 1.7E-36 5.8E-41 283.5 33.9 245 123-406 121-389 (393)
36 2ymu_A WD-40 repeat protein; u 100.0 1.1E-35 3.7E-40 292.1 38.3 239 120-403 339-577 (577)
37 3k26_A Polycomb protein EED; W 100.0 2.2E-36 7.5E-41 279.4 30.9 252 123-406 67-366 (366)
38 2xzm_R RACK1; ribosome, transl 100.0 9E-36 3.1E-40 273.4 33.2 257 121-409 17-288 (343)
39 4a11_B DNA excision repair pro 100.0 8.6E-35 2.9E-39 272.7 39.7 269 122-411 40-370 (408)
40 3dm0_A Maltose-binding peripla 100.0 7.9E-36 2.7E-40 299.3 34.5 270 121-406 378-693 (694)
41 3f3f_A Nucleoporin SEH1; struc 100.0 1.5E-35 5E-40 271.5 33.5 274 122-407 8-338 (351)
42 4aez_A CDC20, WD repeat-contai 100.0 1.2E-34 3.9E-39 271.9 39.5 257 114-409 123-383 (401)
43 1nr0_A Actin interacting prote 100.0 9E-36 3.1E-40 294.3 32.9 245 124-408 17-272 (611)
44 3jrp_A Fusion protein of prote 100.0 8.3E-36 2.8E-40 276.8 30.7 258 122-406 8-287 (379)
45 3ei3_B DNA damage-binding prot 100.0 5.9E-35 2E-39 272.1 35.7 245 122-406 115-382 (383)
46 2j04_B YDR362CP, TAU91; beta p 100.0 2.1E-36 7E-41 290.8 26.3 261 121-410 129-432 (524)
47 3zwl_B Eukaryotic translation 100.0 1.1E-34 3.8E-39 268.1 36.4 274 114-410 21-350 (369)
48 3dwl_C Actin-related protein 2 100.0 1.6E-36 5.6E-41 281.9 21.7 255 124-407 10-282 (377)
49 1sq9_A Antiviral protein SKI8; 100.0 8.5E-35 2.9E-39 272.1 33.4 257 120-407 57-396 (397)
50 1gxr_A ESG1, transducin-like e 100.0 1.1E-33 3.9E-38 258.1 39.8 247 117-404 89-335 (337)
51 1r5m_A SIR4-interacting protei 100.0 2.9E-34 1E-38 270.5 36.6 243 123-408 106-363 (425)
52 1gxr_A ESG1, transducin-like e 100.0 8.8E-34 3E-38 258.8 38.4 257 115-409 41-299 (337)
53 1k8k_C P40, ARP2/3 complex 41 100.0 1.8E-34 6.3E-39 267.3 33.5 307 42-407 9-362 (372)
54 2ymu_A WD-40 repeat protein; u 100.0 5.2E-34 1.8E-38 280.1 38.6 242 121-407 299-540 (577)
55 4h5i_A Guanine nucleotide-exch 100.0 3.2E-35 1.1E-39 271.7 27.6 308 37-408 10-345 (365)
56 4gga_A P55CDC, cell division c 100.0 1.2E-33 4.3E-38 266.5 37.6 258 113-407 134-396 (420)
57 3odt_A Protein DOA1; ubiquitin 100.0 4E-33 1.4E-37 251.9 39.2 253 120-417 54-307 (313)
58 3k26_A Polycomb protein EED; W 100.0 1.3E-34 4.4E-39 267.5 28.8 262 122-408 15-320 (366)
59 3dwl_C Actin-related protein 2 100.0 3.5E-35 1.2E-39 272.9 25.0 264 123-404 53-377 (377)
60 1k8k_C P40, ARP2/3 complex 41 100.0 1.5E-34 5E-39 268.0 28.8 251 123-406 6-274 (372)
61 1sq9_A Antiviral protein SKI8; 100.0 2.7E-34 9.1E-39 268.7 29.9 258 123-408 14-324 (397)
62 3i2n_A WD repeat-containing pr 100.0 8.6E-34 2.9E-38 261.1 31.9 266 115-410 8-295 (357)
63 1r5m_A SIR4-interacting protei 100.0 1.9E-33 6.7E-38 264.8 34.9 257 121-405 145-424 (425)
64 3dw8_B Serine/threonine-protei 100.0 9E-35 3.1E-39 276.3 25.2 266 122-409 25-376 (447)
65 3ei3_B DNA damage-binding prot 100.0 5.1E-34 1.7E-38 265.8 29.8 259 120-409 68-342 (383)
66 2aq5_A Coronin-1A; WD40 repeat 100.0 6.8E-34 2.3E-38 266.7 29.5 258 126-408 35-301 (402)
67 3jro_A Fusion protein of prote 100.0 2.5E-34 8.4E-39 290.3 28.0 260 121-407 5-286 (753)
68 3vl1_A 26S proteasome regulato 100.0 6.9E-33 2.3E-37 261.2 34.4 254 123-406 137-419 (420)
69 3mkq_A Coatomer beta'-subunit; 100.0 4.8E-33 1.6E-37 284.2 34.9 250 121-408 9-261 (814)
70 3vl1_A 26S proteasome regulato 100.0 1.4E-33 4.7E-38 266.0 28.1 244 126-407 98-366 (420)
71 2aq5_A Coronin-1A; WD40 repeat 100.0 1.4E-33 4.8E-38 264.6 27.5 260 122-409 78-345 (402)
72 3frx_A Guanine nucleotide-bind 100.0 5.2E-33 1.8E-37 252.3 29.7 217 169-408 8-229 (319)
73 2pm7_B Protein transport prote 100.0 1.1E-32 3.7E-37 247.6 30.6 219 172-407 3-239 (297)
74 3gre_A Serine/threonine-protei 100.0 9.3E-34 3.2E-38 268.7 24.8 271 122-408 60-361 (437)
75 3odt_A Protein DOA1; ubiquitin 100.0 3.2E-32 1.1E-36 245.9 33.2 244 120-409 13-258 (313)
76 1yfq_A Cell cycle arrest prote 100.0 1.1E-31 3.7E-36 245.7 36.3 285 43-403 13-321 (342)
77 3v7d_B Cell division control p 100.0 5.3E-32 1.8E-36 258.6 35.2 247 119-408 115-383 (464)
78 1yfq_A Cell cycle arrest prote 100.0 1.3E-32 4.6E-37 251.8 29.2 253 123-409 9-285 (342)
79 3dw8_B Serine/threonine-protei 100.0 7.8E-32 2.7E-36 256.0 35.0 319 43-405 30-445 (447)
80 4ggc_A P55CDC, cell division c 100.0 2.2E-31 7.6E-36 241.0 35.9 253 117-406 59-315 (318)
81 3mmy_A MRNA export factor; mRN 100.0 1.8E-32 6.2E-37 253.1 28.7 248 122-405 36-345 (368)
82 3mkq_A Coatomer beta'-subunit; 100.0 1.7E-31 5.9E-36 272.7 38.5 250 121-407 51-303 (814)
83 3bg1_A Protein SEC13 homolog; 100.0 2.4E-32 8.3E-37 247.5 27.9 255 43-349 15-293 (316)
84 4gq1_A NUP37; propeller, trans 100.0 1.9E-32 6.5E-37 255.9 27.7 238 138-405 101-388 (393)
85 3sfz_A APAF-1, apoptotic pepti 100.0 5.7E-32 1.9E-36 288.4 35.1 249 119-406 609-913 (1249)
86 3v7d_B Cell division control p 100.0 3.1E-31 1.1E-35 253.4 36.5 250 121-410 158-425 (464)
87 3gre_A Serine/threonine-protei 100.0 3.1E-33 1.1E-37 265.2 22.0 259 121-403 107-437 (437)
88 4aez_A CDC20, WD repeat-contai 100.0 1.1E-31 3.8E-36 251.6 32.2 248 117-407 83-337 (401)
89 4e54_B DNA damage-binding prot 100.0 7.7E-33 2.6E-37 262.2 23.9 220 169-408 110-329 (435)
90 2xyi_A Probable histone-bindin 100.0 6.4E-32 2.2E-36 255.5 29.6 274 120-406 40-353 (430)
91 4ery_A WD repeat-containing pr 100.0 2.3E-31 7.9E-36 240.7 31.9 213 168-408 13-225 (312)
92 1p22_A F-BOX/WD-repeat protein 100.0 3E-31 1E-35 251.4 33.8 249 121-409 169-417 (435)
93 1pgu_A Actin interacting prote 100.0 1.8E-31 6.2E-36 263.7 30.7 253 123-408 16-285 (615)
94 3sfz_A APAF-1, apoptotic pepti 100.0 5.9E-31 2E-35 280.6 36.6 267 121-409 653-1037(1249)
95 1p22_A F-BOX/WD-repeat protein 100.0 1E-30 3.6E-35 247.6 33.1 238 122-408 130-367 (435)
96 2oaj_A Protein SNI1; WD40 repe 100.0 4.5E-31 1.5E-35 270.4 32.8 264 115-404 7-310 (902)
97 4a11_B DNA excision repair pro 100.0 1.9E-30 6.3E-35 243.2 33.3 312 19-405 23-404 (408)
98 1pgu_A Actin interacting prote 100.0 1.3E-30 4.5E-35 257.6 33.6 253 120-407 58-329 (615)
99 2vdu_B TRNA (guanine-N(7)-)-me 100.0 1.6E-29 5.6E-34 240.5 38.4 249 123-406 100-391 (450)
100 2oaj_A Protein SNI1; WD40 repe 100.0 2.3E-30 7.8E-35 265.2 34.3 243 41-347 17-310 (902)
101 2vdu_B TRNA (guanine-N(7)-)-me 100.0 2.2E-30 7.7E-35 246.4 31.9 266 125-404 4-337 (450)
102 4gga_A P55CDC, cell division c 100.0 1.3E-29 4.4E-34 239.0 35.5 243 127-408 107-355 (420)
103 4aow_A Guanine nucleotide-bind 100.0 2.5E-30 8.6E-35 236.4 29.0 220 168-408 28-248 (340)
104 3lrv_A PRE-mRNA-splicing facto 100.0 9.3E-31 3.2E-35 240.0 26.0 237 134-407 45-293 (343)
105 3jrp_A Fusion protein of prote 100.0 6.7E-30 2.3E-34 237.0 32.1 251 43-349 13-287 (379)
106 2ovr_B FBW7, F-BOX/WD repeat p 100.0 2E-29 6.9E-34 239.5 35.4 236 122-409 156-394 (445)
107 3f3f_A Nucleoporin SEH1; struc 100.0 1.5E-29 5E-34 231.5 32.8 265 43-351 13-339 (351)
108 3dm0_A Maltose-binding peripla 100.0 3.7E-30 1.3E-34 258.1 30.5 216 171-408 375-594 (694)
109 2j04_A TAU60, YPL007P, hypothe 100.0 2.4E-30 8.1E-35 243.4 26.7 245 123-405 13-296 (588)
110 3vu4_A KMHSV2; beta-propeller 100.0 2.1E-29 7.1E-34 232.0 31.9 238 121-408 15-273 (355)
111 2ovr_B FBW7, F-BOX/WD repeat p 100.0 1.3E-28 4.4E-33 234.0 34.3 237 121-407 195-443 (445)
112 4h5i_A Guanine nucleotide-exch 100.0 8.4E-30 2.9E-34 235.4 25.0 206 124-350 132-344 (365)
113 1l0q_A Surface layer protein; 100.0 5.1E-28 1.8E-32 225.7 35.2 251 119-409 25-278 (391)
114 4ggc_A P55CDC, cell division c 100.0 5.5E-28 1.9E-32 218.7 33.8 243 128-409 28-276 (318)
115 3jro_A Fusion protein of prote 100.0 1.2E-28 4E-33 248.9 30.0 252 43-351 11-287 (753)
116 3zwl_B Eukaryotic translation 100.0 4.8E-28 1.7E-32 223.5 31.3 215 166-408 20-251 (369)
117 3vu4_A KMHSV2; beta-propeller 100.0 3.5E-27 1.2E-31 217.1 36.9 251 127-407 60-337 (355)
118 2w18_A PALB2, fancn, partner a 100.0 5.5E-28 1.9E-32 213.9 29.9 257 112-405 21-356 (356)
119 3lrv_A PRE-mRNA-splicing facto 100.0 1E-27 3.4E-32 219.8 30.2 244 125-406 76-333 (343)
120 3bws_A Protein LP49; two-domai 100.0 5.4E-27 1.9E-31 221.8 31.5 243 123-406 167-432 (433)
121 3bws_A Protein LP49; two-domai 100.0 3.9E-27 1.3E-31 222.8 30.4 255 114-409 111-393 (433)
122 2j04_A TAU60, YPL007P, hypothe 100.0 1.5E-27 5.2E-32 224.4 25.6 242 122-394 82-349 (588)
123 4gq1_A NUP37; propeller, trans 100.0 6.7E-28 2.3E-32 225.1 22.4 278 124-409 14-351 (393)
124 3mmy_A MRNA export factor; mRN 100.0 1.9E-26 6.4E-31 212.7 29.2 254 43-349 41-346 (368)
125 1l0q_A Surface layer protein; 100.0 3E-26 1E-30 213.7 29.9 231 139-408 3-235 (391)
126 2w18_A PALB2, fancn, partner a 100.0 5.5E-27 1.9E-31 207.5 21.6 199 124-347 110-355 (356)
127 3hfq_A Uncharacterized protein 99.9 1.2E-24 4.1E-29 199.5 33.3 297 63-409 2-322 (347)
128 1ri6_A Putative isomerase YBHE 99.9 6.3E-24 2.2E-28 194.0 27.8 268 115-405 27-307 (343)
129 2hqs_A Protein TOLB; TOLB, PAL 99.9 1.2E-23 4.1E-28 197.5 30.1 245 120-409 112-390 (415)
130 3scy_A Hypothetical bacterial 99.9 5.5E-22 1.9E-26 182.9 36.8 300 63-410 13-343 (361)
131 3u4y_A Uncharacterized protein 99.9 1E-22 3.5E-27 185.2 30.7 253 124-409 39-307 (331)
132 2ojh_A Uncharacterized protein 99.9 6.9E-23 2.4E-27 182.7 28.1 243 120-396 36-293 (297)
133 2oit_A Nucleoporin 214KDA; NH2 99.9 8.7E-24 3E-28 199.2 22.8 216 126-351 37-280 (434)
134 2hqs_A Protein TOLB; TOLB, PAL 99.9 4.4E-22 1.5E-26 186.9 31.8 225 121-387 174-410 (415)
135 1nir_A Nitrite reductase; hemo 99.9 3.9E-22 1.3E-26 193.0 31.4 259 120-409 173-461 (543)
136 1nir_A Nitrite reductase; hemo 99.9 1.3E-21 4.6E-26 189.3 34.0 264 116-410 212-518 (543)
137 3vgz_A Uncharacterized protein 99.9 2.2E-21 7.5E-26 177.9 31.1 251 121-409 36-306 (353)
138 3u4y_A Uncharacterized protein 99.9 2.1E-21 7E-26 176.6 28.9 246 131-409 3-255 (331)
139 2oit_A Nucleoporin 214KDA; NH2 99.9 1.4E-22 4.7E-27 191.0 18.6 210 179-407 37-279 (434)
140 1ri6_A Putative isomerase YBHE 99.9 1.2E-21 4E-26 178.9 24.2 246 137-405 4-261 (343)
141 2ojh_A Uncharacterized protein 99.9 2.6E-21 8.8E-26 172.5 25.9 228 143-409 17-261 (297)
142 3vgz_A Uncharacterized protein 99.9 8.5E-20 2.9E-24 167.3 33.9 238 119-395 82-334 (353)
143 2ecf_A Dipeptidyl peptidase IV 99.9 2E-20 6.9E-25 189.0 28.8 242 126-406 109-413 (741)
144 1jof_A Carboxy-CIS,CIS-muconat 99.9 1E-19 3.6E-24 167.8 31.1 294 63-409 2-344 (365)
145 1pby_B Quinohemoprotein amine 99.9 4.5E-20 1.5E-24 167.9 26.3 247 119-409 24-313 (337)
146 2ecf_A Dipeptidyl peptidase IV 99.9 2.1E-20 7.3E-25 188.8 25.0 241 125-405 36-366 (741)
147 1xfd_A DIP, dipeptidyl aminope 99.9 4.6E-20 1.6E-24 185.8 24.5 244 127-408 18-347 (723)
148 3o4h_A Acylamino-acid-releasin 99.9 3.5E-20 1.2E-24 181.9 22.9 233 125-404 21-274 (582)
149 1jmx_B Amine dehydrogenase; ox 99.9 4.1E-19 1.4E-23 162.4 27.1 238 130-409 4-328 (349)
150 2z3z_A Dipeptidyl aminopeptida 99.8 2.5E-19 8.4E-24 180.0 26.9 253 120-408 115-437 (706)
151 3hfq_A Uncharacterized protein 99.8 2.2E-18 7.6E-23 157.7 29.1 222 116-348 75-316 (347)
152 2z3z_A Dipeptidyl aminopeptida 99.8 1.8E-19 6.1E-24 181.0 23.5 244 125-408 81-393 (706)
153 1xfd_A DIP, dipeptidyl aminope 99.8 4.1E-19 1.4E-23 178.8 24.0 246 127-406 62-393 (723)
154 1k32_A Tricorn protease; prote 99.8 1.7E-18 5.8E-23 181.1 26.2 234 126-406 245-502 (1045)
155 1k32_A Tricorn protease; prote 99.8 3.3E-18 1.1E-22 178.9 28.3 246 122-408 200-463 (1045)
156 3scy_A Hypothetical bacterial 99.8 2.3E-17 7.9E-22 151.8 28.3 241 140-405 15-290 (361)
157 3o4h_A Acylamino-acid-releasin 99.8 1.1E-17 3.7E-22 164.2 26.9 274 41-406 21-315 (582)
158 1pby_B Quinohemoprotein amine 99.8 1.3E-17 4.3E-22 151.6 22.9 229 139-408 2-271 (337)
159 3fvz_A Peptidyl-glycine alpha- 99.8 3.2E-16 1.1E-20 142.2 28.8 243 126-407 24-323 (329)
160 1z68_A Fibroblast activation p 99.8 6.2E-17 2.1E-21 162.9 24.3 247 127-406 61-391 (719)
161 1z68_A Fibroblast activation p 99.8 5.8E-18 2E-22 170.4 16.7 240 130-408 20-348 (719)
162 1q7f_A NHL, brain tumor CG1071 99.8 2E-15 6.8E-20 134.1 30.1 237 125-407 29-281 (286)
163 3pe7_A Oligogalacturonate lyas 99.8 1.6E-16 5.4E-21 147.6 23.6 250 123-409 28-332 (388)
164 4a5s_A Dipeptidyl peptidase 4 99.7 4.3E-16 1.5E-20 157.1 25.8 246 127-409 18-356 (740)
165 1jmx_B Amine dehydrogenase; ox 99.7 1.1E-15 3.7E-20 139.6 23.9 196 127-350 44-326 (349)
166 3pe7_A Oligogalacturonate lyas 99.7 7.4E-16 2.5E-20 143.0 21.0 243 124-405 79-381 (388)
167 3azo_A Aminopeptidase; POP fam 99.7 2.5E-15 8.7E-20 149.6 25.7 247 121-408 19-327 (662)
168 3e5z_A Putative gluconolactona 99.7 3.3E-14 1.1E-18 126.9 29.3 244 123-410 25-290 (296)
169 2dg1_A DRP35, lactonase; beta 99.7 1.6E-13 5.6E-18 124.5 34.2 236 122-395 41-300 (333)
170 1jof_A Carboxy-CIS,CIS-muconat 99.7 5E-15 1.7E-19 136.4 23.9 209 126-349 83-341 (365)
171 1rwi_B Serine/threonine-protei 99.7 5E-14 1.7E-18 123.8 27.6 240 127-409 25-267 (270)
172 3c5m_A Oligogalacturonate lyas 99.7 3.1E-15 1.1E-19 139.1 20.3 241 126-409 36-332 (396)
173 2xdw_A Prolyl endopeptidase; a 99.7 5.8E-14 2E-18 140.9 30.7 252 124-408 123-416 (710)
174 2oiz_A Aromatic amine dehydrog 99.7 1.7E-14 5.8E-19 132.4 23.1 220 146-407 29-335 (361)
175 3azo_A Aminopeptidase; POP fam 99.7 8.4E-15 2.9E-19 145.9 22.7 251 130-408 81-371 (662)
176 4a5s_A Dipeptidyl peptidase 4 99.7 4.2E-14 1.4E-18 142.6 26.7 204 129-350 65-354 (740)
177 1pjx_A Dfpase, DIISOPROPYLFLUO 99.6 1.1E-12 3.7E-17 117.8 28.3 245 125-407 17-300 (314)
178 2dg1_A DRP35, lactonase; beta 99.6 1.6E-13 5.6E-18 124.5 23.0 246 126-407 6-264 (333)
179 2gop_A Trilobed protease; beta 99.6 2.8E-13 9.6E-18 123.6 24.5 224 126-405 59-330 (347)
180 2bkl_A Prolyl endopeptidase; m 99.6 1.3E-13 4.3E-18 138.0 23.1 251 124-408 119-399 (695)
181 3c5m_A Oligogalacturonate lyas 99.6 8.7E-14 3E-18 129.2 20.5 232 130-405 85-381 (396)
182 2z2n_A Virginiamycin B lyase; 99.6 1.3E-11 4.3E-16 109.9 32.2 242 123-405 12-254 (299)
183 2oiz_A Aromatic amine dehydrog 99.6 1.6E-12 5.3E-17 119.3 26.3 221 130-387 54-360 (361)
184 1qks_A Cytochrome CD1 nitrite 99.6 8.2E-12 2.8E-16 120.6 31.6 269 118-407 189-478 (567)
185 3fvz_A Peptidyl-glycine alpha- 99.6 1.7E-12 5.8E-17 117.6 25.4 201 124-349 89-322 (329)
186 3dsm_A Uncharacterized protein 99.5 2.2E-12 7.7E-17 116.7 24.3 236 127-405 45-301 (328)
187 1q7f_A NHL, brain tumor CG1071 99.5 2.2E-12 7.7E-17 114.2 23.8 205 177-407 28-239 (286)
188 2gop_A Trilobed protease; beta 99.5 1.4E-12 4.8E-17 118.9 22.6 224 126-407 15-292 (347)
189 2z2n_A Virginiamycin B lyase; 99.5 7.1E-11 2.4E-15 104.9 32.1 242 124-408 55-297 (299)
190 1xip_A Nucleoporin NUP159; bet 99.5 1.6E-12 5.6E-17 118.5 21.3 180 127-335 39-230 (388)
191 1qks_A Cytochrome CD1 nitrite 99.5 3.7E-11 1.3E-15 116.0 32.0 229 139-406 168-421 (567)
192 3g4e_A Regucalcin; six bladed 99.5 2.2E-11 7.5E-16 108.6 28.3 233 126-396 13-263 (297)
193 3hrp_A Uncharacterized protein 99.5 2.6E-11 9E-16 112.9 29.5 240 126-404 131-408 (409)
194 1yr2_A Prolyl oligopeptidase; 99.5 1.3E-11 4.3E-16 124.4 27.2 250 126-408 163-443 (741)
195 2xdw_A Prolyl endopeptidase; a 99.5 3.7E-11 1.3E-15 120.5 30.2 205 128-351 173-416 (710)
196 3no2_A Uncharacterized protein 99.5 2.3E-11 7.7E-16 107.0 25.2 210 139-393 6-230 (276)
197 3e5z_A Putative gluconolactona 99.5 1E-11 3.6E-16 110.5 22.9 211 171-408 20-248 (296)
198 2ghs_A AGR_C_1268P; regucalcin 99.5 1.5E-10 5E-15 104.6 29.5 228 127-397 50-294 (326)
199 3iuj_A Prolyl endopeptidase; h 99.5 2.1E-11 7.1E-16 121.8 26.1 250 124-408 127-407 (693)
200 2qc5_A Streptogramin B lactona 99.4 5.4E-10 1.9E-14 99.2 32.1 241 124-405 18-259 (300)
201 1xip_A Nucleoporin NUP159; bet 99.4 6.1E-12 2.1E-16 114.8 17.5 178 180-392 39-230 (388)
202 1rwi_B Serine/threonine-protei 99.4 1.1E-10 3.7E-15 102.3 24.0 199 125-350 66-265 (270)
203 2bkl_A Prolyl endopeptidase; m 99.4 3.6E-11 1.2E-15 120.3 23.3 205 176-405 118-348 (695)
204 2qc5_A Streptogramin B lactona 99.4 1.5E-09 5.1E-14 96.4 31.5 238 125-405 61-299 (300)
205 2mad_H Methylamine dehydrogena 99.4 1.6E-09 5.5E-14 99.4 32.2 250 120-412 61-356 (373)
206 3dsm_A Uncharacterized protein 99.3 3.3E-10 1.1E-14 102.3 22.8 202 119-348 77-301 (328)
207 3dr2_A Exported gluconolactona 99.3 1.6E-09 5.6E-14 96.7 25.6 228 123-397 42-298 (305)
208 2qe8_A Uncharacterized protein 99.3 1.4E-10 4.9E-15 105.5 18.4 260 114-400 7-315 (343)
209 3no2_A Uncharacterized protein 99.3 4.9E-10 1.7E-14 98.5 20.3 183 193-409 7-198 (276)
210 3g4e_A Regucalcin; six bladed 99.2 7.6E-09 2.6E-13 92.0 25.9 209 177-409 11-232 (297)
211 3sjl_D Methylamine dehydrogena 99.2 5.4E-09 1.8E-13 95.0 24.9 252 118-411 71-368 (386)
212 3hrp_A Uncharacterized protein 99.2 2.1E-09 7.1E-14 100.1 22.7 200 180-409 132-357 (409)
213 1pjx_A Dfpase, DIISOPROPYLFLUO 99.2 3.1E-09 1.1E-13 95.1 23.2 202 124-350 69-300 (314)
214 1yr2_A Prolyl oligopeptidase; 99.2 1.4E-09 4.7E-14 109.6 22.1 203 177-405 161-392 (741)
215 3c75_H MADH, methylamine dehyd 99.2 6.9E-09 2.3E-13 96.0 24.1 256 117-410 110-406 (426)
216 3iuj_A Prolyl endopeptidase; h 99.2 2.7E-09 9.1E-14 106.6 21.9 207 177-407 127-360 (693)
217 2mad_H Methylamine dehydrogena 99.2 8.1E-08 2.8E-12 88.1 29.4 205 127-352 126-353 (373)
218 2ece_A 462AA long hypothetical 99.1 4.9E-08 1.7E-12 89.4 26.8 229 135-393 93-399 (462)
219 1mda_H Methylamine dehydrogena 99.1 3.7E-09 1.3E-13 96.2 18.5 233 140-411 34-351 (368)
220 2ghs_A AGR_C_1268P; regucalcin 99.1 6.3E-08 2.1E-12 87.2 26.2 200 181-407 51-261 (326)
221 1npe_A Nidogen, entactin; glyc 99.1 6.8E-07 2.3E-11 77.9 31.2 223 127-387 37-263 (267)
222 1npe_A Nidogen, entactin; glyc 99.1 6.7E-07 2.3E-11 77.9 30.1 229 148-409 10-241 (267)
223 1fwx_A Nitrous oxide reductase 99.0 2.9E-08 1E-12 94.1 20.6 249 136-409 100-434 (595)
224 2iwa_A Glutamine cyclotransfer 99.0 1.3E-07 4.4E-12 81.4 22.2 208 115-350 8-238 (266)
225 1mda_H Methylamine dehydrogena 99.0 5.3E-08 1.8E-12 88.5 20.2 213 118-350 58-347 (368)
226 3dr2_A Exported gluconolactona 99.0 8.8E-08 3E-12 85.4 20.6 205 171-407 37-268 (305)
227 2ece_A 462AA long hypothetical 98.9 2E-07 6.9E-12 85.4 21.9 212 183-405 86-351 (462)
228 3sjl_D Methylamine dehydrogena 98.9 4E-07 1.4E-11 82.8 23.3 206 127-351 138-365 (386)
229 2qe8_A Uncharacterized protein 98.9 8.1E-08 2.8E-12 87.2 18.9 216 179-407 17-279 (343)
230 3c75_H MADH, methylamine dehyd 98.9 2E-07 6.9E-12 86.2 21.6 248 136-409 83-362 (426)
231 2hz6_A Endoplasmic reticulum t 98.9 1.4E-09 4.8E-14 99.9 6.9 179 140-351 11-194 (369)
232 2fp8_A Strictosidine synthase; 98.9 4.9E-06 1.7E-10 74.6 28.2 240 126-406 19-313 (322)
233 3v64_C Agrin; beta propeller, 98.9 2.5E-05 8.6E-10 70.7 33.0 241 126-407 34-276 (349)
234 3hxj_A Pyrrolo-quinoline quino 98.9 9.2E-07 3.2E-11 79.4 23.5 218 140-408 109-326 (330)
235 3nol_A Glutamine cyclotransfer 98.8 9E-07 3.1E-11 75.2 21.2 194 115-337 30-244 (262)
236 1ijq_A LDL receptor, low-densi 98.8 2.5E-05 8.6E-10 69.7 31.7 229 147-407 9-239 (316)
237 3v65_B Low-density lipoprotein 98.8 1.4E-05 4.9E-10 73.5 30.2 240 128-407 79-319 (386)
238 2iwa_A Glutamine cyclotransfer 98.8 4.8E-07 1.6E-11 77.8 17.6 205 181-407 23-238 (266)
239 3nok_A Glutaminyl cyclase; bet 98.8 8.9E-07 3.1E-11 75.2 18.9 191 115-337 42-254 (268)
240 2hz6_A Endoplasmic reticulum t 98.8 3.4E-09 1.1E-13 97.3 4.4 180 193-409 11-195 (369)
241 3v64_C Agrin; beta propeller, 98.7 7.6E-05 2.6E-09 67.6 31.7 206 124-351 71-277 (349)
242 3p5b_L Low density lipoprotein 98.7 9.9E-05 3.4E-09 68.1 32.9 230 147-407 91-321 (400)
243 3v65_B Low-density lipoprotein 98.7 3.9E-05 1.3E-09 70.6 29.5 207 124-352 114-321 (386)
244 3mbr_X Glutamine cyclotransfer 98.7 9.5E-06 3.2E-10 68.4 23.0 193 114-337 7-223 (243)
245 2p4o_A Hypothetical protein; p 98.7 7.1E-05 2.4E-09 66.4 28.7 243 113-394 19-277 (306)
246 1kb0_A Quinohemoprotein alcoho 98.6 1.4E-06 4.7E-11 86.4 18.5 235 140-409 130-510 (677)
247 3hxj_A Pyrrolo-quinoline quino 98.6 3.8E-06 1.3E-10 75.3 19.7 175 193-405 109-283 (330)
248 3qqz_A Putative uncharacterize 98.6 5E-05 1.7E-09 64.9 25.3 205 124-346 25-250 (255)
249 3qqz_A Putative uncharacterize 98.6 0.00011 3.8E-09 62.7 26.8 209 174-405 22-252 (255)
250 1fwx_A Nitrous oxide reductase 98.6 2.7E-06 9.2E-11 80.8 18.3 212 121-349 129-431 (595)
251 1yiq_A Quinohemoprotein alcoho 98.6 1.5E-05 5.2E-10 79.1 24.3 237 140-409 123-508 (689)
252 3nol_A Glutamine cyclotransfer 98.6 4.5E-06 1.5E-10 71.0 17.4 197 177-394 39-244 (262)
253 3kya_A Putative phosphatase; s 98.5 9.9E-05 3.4E-09 69.2 27.2 267 128-416 141-485 (496)
254 3sov_A LRP-6, low-density lipo 98.5 0.00032 1.1E-08 62.4 29.5 227 147-408 12-240 (318)
255 1kb0_A Quinohemoprotein alcoho 98.5 2.9E-05 1E-09 76.9 24.2 201 182-408 246-569 (677)
256 3nok_A Glutaminyl cyclase; bet 98.5 1.9E-05 6.4E-10 67.2 19.2 193 181-394 57-254 (268)
257 3p5b_L Low density lipoprotein 98.5 0.00071 2.4E-08 62.4 30.6 213 122-352 108-323 (400)
258 3m0c_C LDL receptor, low-densi 98.4 0.00042 1.4E-08 69.4 30.5 230 147-407 403-633 (791)
259 2xe4_A Oligopeptidase B; hydro 98.4 0.00017 5.7E-09 72.5 27.8 199 127-346 175-395 (751)
260 3mbr_X Glutamine cyclotransfer 98.4 2.3E-05 7.8E-10 66.0 18.0 199 176-394 16-223 (243)
261 1yiq_A Quinohemoprotein alcoho 98.4 8.2E-05 2.8E-09 73.9 25.1 97 295-408 454-571 (689)
262 3sov_A LRP-6, low-density lipo 98.4 0.0011 3.6E-08 59.1 29.5 205 127-352 36-241 (318)
263 1ijq_A LDL receptor, low-densi 98.4 0.0011 3.8E-08 59.0 31.1 209 123-351 27-240 (316)
264 4hw6_A Hypothetical protein, I 98.4 0.00042 1.4E-08 64.6 26.6 255 127-405 140-432 (433)
265 3tc9_A Hypothetical hydrolase; 98.4 0.00032 1.1E-08 65.4 25.8 242 127-405 138-429 (430)
266 3m0c_C LDL receptor, low-densi 98.3 0.00063 2.2E-08 68.1 28.7 211 124-352 422-635 (791)
267 4a2l_A BT_4663, two-component 98.3 0.002 7E-08 65.2 32.9 242 125-410 214-484 (795)
268 4a2l_A BT_4663, two-component 98.3 0.001 3.5E-08 67.4 30.7 244 126-409 263-529 (795)
269 1n7d_A LDL receptor, low-densi 98.3 9.9E-06 3.4E-10 80.4 15.3 207 179-407 406-615 (699)
270 2fp8_A Strictosidine synthase; 98.3 0.00017 5.9E-09 64.4 21.5 208 179-407 19-270 (322)
271 2p4o_A Hypothetical protein; p 98.3 0.00047 1.6E-08 61.1 24.1 200 179-406 32-242 (306)
272 2xe4_A Oligopeptidase B; hydro 98.3 0.00017 5.8E-09 72.5 23.5 199 180-404 175-396 (751)
273 3q7m_A Lipoprotein YFGL, BAMB; 98.3 0.00038 1.3E-08 63.6 24.0 218 140-403 145-375 (376)
274 1k3i_A Galactose oxidase precu 98.3 0.00022 7.6E-09 70.5 23.8 260 112-410 174-501 (656)
275 3v9f_A Two-component system se 98.2 0.0027 9.3E-08 64.1 31.0 238 126-410 313-572 (781)
276 3q7m_A Lipoprotein YFGL, BAMB; 98.2 0.004 1.4E-07 56.7 31.6 227 140-410 105-341 (376)
277 4a0p_A LRP6, LRP-6, low-densit 98.1 0.0066 2.3E-07 59.3 30.8 224 146-407 13-238 (628)
278 3v9f_A Two-component system se 98.1 0.0025 8.6E-08 64.3 28.1 249 125-409 257-527 (781)
279 1n7d_A LDL receptor, low-densi 98.1 3E-05 1E-09 77.0 13.5 210 125-352 405-617 (699)
280 4a0p_A LRP6, LRP-6, low-densit 98.1 0.0087 3E-07 58.5 30.1 203 126-352 37-240 (628)
281 1kv9_A Type II quinohemoprotei 98.0 0.00043 1.5E-08 68.5 20.6 238 140-409 119-491 (668)
282 3s94_A LRP-6, low-density lipo 98.0 0.0087 3E-07 58.4 27.7 229 146-408 16-245 (619)
283 3tc9_A Hypothetical hydrolase; 97.9 0.00078 2.7E-08 62.8 18.9 159 229-406 138-301 (430)
284 4hw6_A Hypothetical protein, I 97.9 0.0027 9.4E-08 59.1 22.2 206 180-405 140-373 (433)
285 2ad6_A Methanol dehydrogenase 97.9 0.0021 7.1E-08 62.3 21.4 58 251-313 273-342 (571)
286 2p9w_A MAL S 1 allergenic prot 97.9 0.0022 7.6E-08 56.4 19.2 207 127-349 14-265 (334)
287 2ism_A Putative oxidoreductase 97.8 0.015 5.3E-07 52.3 24.7 240 126-394 31-333 (352)
288 1k3i_A Galactose oxidase precu 97.8 0.00032 1.1E-08 69.3 14.4 234 128-395 245-530 (656)
289 1kv9_A Type II quinohemoprotei 97.7 0.0075 2.6E-07 59.6 23.3 54 295-351 437-490 (668)
290 2ad6_A Methanol dehydrogenase 97.7 0.0081 2.8E-07 58.1 22.7 54 295-351 443-496 (571)
291 3kya_A Putative phosphatase; s 97.7 0.00072 2.5E-08 63.4 14.2 171 229-405 140-340 (496)
292 1flg_A Protein (quinoprotein e 97.7 0.022 7.4E-07 55.2 25.0 59 250-313 291-362 (582)
293 3amr_A 3-phytase; beta-propell 97.6 0.016 5.6E-07 51.4 21.5 191 193-405 42-262 (355)
294 2p9w_A MAL S 1 allergenic prot 97.6 0.016 5.5E-07 51.0 20.4 165 173-349 7-215 (334)
295 1w6s_A Methanol dehydrogenase 97.6 0.064 2.2E-06 52.0 27.2 54 295-351 452-505 (599)
296 1flg_A Protein (quinoprotein e 97.6 0.043 1.5E-06 53.1 25.5 81 295-392 465-546 (582)
297 1w6s_A Methanol dehydrogenase 97.5 0.033 1.1E-06 54.0 23.4 59 250-313 278-349 (599)
298 3sre_A PON1, serum paraoxonase 97.5 0.018 6.3E-07 51.6 19.8 195 180-396 51-287 (355)
299 3s94_A LRP-6, low-density lipo 97.4 0.1 3.6E-06 50.8 32.2 161 179-349 349-510 (619)
300 3sre_A PON1, serum paraoxonase 97.4 0.064 2.2E-06 48.1 23.1 194 127-339 51-287 (355)
301 2xbg_A YCF48-like protein; pho 97.4 0.03 1E-06 49.9 20.0 195 125-347 121-320 (327)
302 2xbg_A YCF48-like protein; pho 97.3 0.092 3.2E-06 46.6 26.5 237 126-404 80-320 (327)
303 2vpj_A Kelch-like protein 12; 97.2 0.038 1.3E-06 48.4 18.8 193 192-410 64-282 (301)
304 3a9g_A Putative uncharacterize 97.1 0.13 4.6E-06 46.2 27.9 243 124-394 27-330 (354)
305 3amr_A 3-phytase; beta-propell 97.0 0.17 5.8E-06 44.9 20.2 156 147-313 98-271 (355)
306 2xzh_A Clathrin heavy chain 1; 97.0 0.17 5.8E-06 44.3 27.8 236 131-407 72-333 (365)
307 2xn4_A Kelch-like protein 2; s 96.9 0.067 2.3E-06 46.8 17.8 192 192-412 63-282 (302)
308 2ism_A Putative oxidoreductase 96.9 0.07 2.4E-06 48.0 18.1 109 178-292 30-152 (352)
309 2g8s_A Glucose/sorbosone dehyd 96.8 0.26 8.7E-06 44.3 25.0 256 126-405 18-351 (353)
310 3ii7_A Kelch-like protein 7; p 96.8 0.075 2.6E-06 46.6 17.0 233 138-410 12-276 (306)
311 3pbp_A Nucleoporin NUP82; beta 96.8 0.32 1.1E-05 44.3 20.7 153 237-401 30-207 (452)
312 3ei3_A DNA damage-binding prot 96.7 0.78 2.7E-05 48.1 27.2 148 186-349 839-999 (1158)
313 3a9g_A Putative uncharacterize 96.6 0.28 9.5E-06 44.1 19.6 215 179-406 29-296 (354)
314 4asc_A Kelch repeat and BTB do 96.6 0.2 6.7E-06 44.1 18.2 105 239-350 98-222 (315)
315 1bpo_A Protein (clathrin); cla 96.5 0.5 1.7E-05 43.1 29.7 236 131-407 71-332 (494)
316 1tl2_A L10, protein (tachylect 96.4 0.25 8.7E-06 40.6 15.9 136 192-343 5-157 (236)
317 1zgk_A Kelch-like ECH-associat 96.4 0.18 6E-06 44.2 16.5 150 240-411 122-292 (308)
318 3das_A Putative oxidoreductase 96.3 0.54 1.9E-05 41.9 25.7 244 124-394 30-326 (347)
319 2g8s_A Glucose/sorbosone dehyd 96.3 0.58 2E-05 41.9 19.8 223 179-407 18-309 (353)
320 1xi4_A Clathrin heavy chain; a 96.2 0.41 1.4E-05 50.5 19.4 207 184-409 71-292 (1630)
321 3pbp_A Nucleoporin NUP82; beta 96.1 0.78 2.7E-05 41.8 21.6 148 136-301 31-208 (452)
322 2woz_A Kelch repeat and BTB do 96.0 0.45 1.5E-05 41.8 17.4 105 240-351 110-233 (318)
323 1xi4_A Clathrin heavy chain; a 96.0 0.72 2.5E-05 48.7 20.3 195 132-352 72-292 (1630)
324 3ei3_A DNA damage-binding prot 96.0 1.9 6.6E-05 45.2 29.0 201 115-335 543-754 (1158)
325 1cru_A Protein (soluble quinop 95.7 0.75 2.6E-05 42.8 17.8 110 177-292 25-162 (454)
326 2vpj_A Kelch-like protein 12; 95.7 0.47 1.6E-05 41.2 15.8 190 139-350 64-279 (301)
327 1cru_A Protein (soluble quinop 95.6 1.4 4.8E-05 41.0 26.8 113 125-247 26-162 (454)
328 2xn4_A Kelch-like protein 2; s 95.4 0.42 1.4E-05 41.6 14.6 144 193-350 111-277 (302)
329 3ii7_A Kelch-like protein 7; p 95.1 0.5 1.7E-05 41.2 14.0 187 139-350 57-273 (306)
330 2xzh_A Clathrin heavy chain 1; 94.8 2 6.7E-05 37.7 24.5 205 123-349 104-332 (365)
331 2uvk_A YJHT; unknown function, 94.7 0.84 2.9E-05 40.8 14.7 32 384-416 315-352 (357)
332 1zgk_A Kelch-like ECH-associat 94.6 0.56 1.9E-05 40.9 13.0 143 193-349 124-287 (308)
333 1sqj_A OXG-RCBH, oligoxylogluc 94.6 4.1 0.00014 40.9 20.6 157 125-295 14-190 (789)
334 1bpo_A Protein (clathrin); cla 94.2 3.3 0.00011 37.9 25.5 205 123-349 103-331 (494)
335 4asc_A Kelch repeat and BTB do 94.1 2.7 9.3E-05 36.6 16.6 62 240-305 149-221 (315)
336 1tl2_A L10, protein (tachylect 94.0 2.2 7.5E-05 35.1 16.2 114 126-253 41-157 (236)
337 3das_A Putative oxidoreductase 93.4 4 0.00014 36.2 24.0 226 174-406 27-292 (347)
338 3s25_A Hypothetical 7-bladed b 92.9 4.4 0.00015 35.2 17.9 103 234-349 110-216 (302)
339 3b7f_A Glycosyl hydrolase, BNR 92.9 5.2 0.00018 36.1 18.3 158 179-343 177-366 (394)
340 3ott_A Two-component system se 92.7 8.7 0.0003 38.2 25.4 197 127-350 374-587 (758)
341 3q6k_A 43.2 kDa salivary prote 92.7 5.4 0.00019 35.8 18.9 157 227-394 151-342 (381)
342 2woz_A Kelch repeat and BTB do 92.7 4.7 0.00016 35.1 16.1 62 240-305 159-231 (318)
343 3b7f_A Glycosyl hydrolase, BNR 92.5 5.9 0.0002 35.8 26.5 148 180-336 116-296 (394)
344 2zwa_A Leucine carboxyl methyl 91.8 3 0.0001 41.2 14.2 150 193-351 454-637 (695)
345 3ott_A Two-component system se 91.4 12 0.00042 37.1 29.5 232 125-409 21-263 (758)
346 2zwa_A Leucine carboxyl methyl 90.4 13 0.00044 36.6 17.2 68 189-261 500-579 (695)
347 2wg3_C Hedgehog-interacting pr 89.9 5.3 0.00018 37.1 13.2 114 179-293 14-157 (463)
348 3sbq_A Nitrous-oxide reductase 88.5 2.3 8E-05 40.2 9.4 97 251-349 299-408 (638)
349 2uvk_A YJHT; unknown function, 88.0 4.1 0.00014 36.1 10.9 51 297-350 286-343 (357)
350 2be1_A Serine/threonine-protei 86.5 5.9 0.0002 35.0 10.6 115 193-315 12-139 (339)
351 1sqj_A OXG-RCBH, oligoxylogluc 83.7 38 0.0013 33.9 16.4 156 178-339 14-190 (789)
352 2cn3_A Xyloglucanase, beta-1,4 83.4 37 0.0013 33.6 23.5 110 126-248 23-152 (737)
353 3s25_A Hypothetical 7-bladed b 82.6 23 0.00079 30.6 20.8 141 184-349 109-255 (302)
354 3sbq_A Nitrous-oxide reductase 71.5 14 0.00047 35.1 8.1 77 228-305 323-408 (638)
355 2be1_A Serine/threonine-protei 67.3 65 0.0022 28.3 16.3 110 140-262 12-133 (339)
356 2cn3_A Xyloglucanase, beta-1,4 65.4 1.1E+02 0.0038 30.2 18.8 110 180-294 24-152 (737)
357 4gq2_M Nucleoporin NUP120; bet 58.6 24 0.00082 36.2 7.9 34 376-410 237-270 (950)
358 4gq2_M Nucleoporin NUP120; bet 53.2 35 0.0012 35.0 8.0 33 180-213 237-269 (950)
359 2wg3_C Hedgehog-interacting pr 49.0 1.6E+02 0.0056 27.1 31.2 259 126-405 14-370 (463)
360 4fhn_B Nucleoporin NUP120; pro 44.2 38 0.0013 35.5 6.8 33 376-409 239-271 (1139)
361 3a0f_A Xyloglucanase; beta-pro 43.7 2.5E+02 0.0086 27.8 22.2 163 123-296 18-203 (763)
362 3a0f_A Xyloglucanase; beta-pro 39.2 3E+02 0.01 27.3 17.7 158 177-340 19-203 (763)
363 3zwu_A Alkaline phosphatase PH 38.6 2.7E+02 0.0092 26.6 14.1 58 276-335 478-548 (592)
364 3f7f_A Nucleoporin NUP120; nuc 38.2 78 0.0027 31.0 7.3 71 320-407 224-306 (729)
365 4hvt_A Ritya.17583.B, post-pro 36.6 3.2E+02 0.011 26.8 18.4 210 183-407 133-382 (711)
366 4hvt_A Ritya.17583.B, post-pro 31.9 3.8E+02 0.013 26.3 24.3 247 129-405 132-429 (711)
367 4a9v_A PHOX; hydrolase, beta-p 29.8 2.8E+02 0.0097 26.4 9.4 65 274-340 476-553 (592)
368 3q6k_A 43.2 kDa salivary prote 26.6 3.4E+02 0.012 24.1 21.2 156 180-336 153-341 (381)
369 3zwu_A Alkaline phosphatase PH 26.3 2.9E+02 0.0099 26.4 9.0 20 374-393 530-549 (592)
370 4fhn_B Nucleoporin NUP120; pro 25.2 6E+02 0.021 26.5 16.8 38 275-314 239-276 (1139)
371 3qhy_B Beta-lactamase inhibito 21.2 3.6E+02 0.012 22.5 23.7 222 127-406 25-246 (282)
372 4a9v_A PHOX; hydrolase, beta-p 21.2 5.4E+02 0.019 24.5 9.7 21 375-395 531-551 (592)
373 3kci_A Probable E3 ubiquitin-p 20.6 4.4E+02 0.015 23.2 25.2 251 140-406 64-345 (389)
No 1
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=100.00 E-value=4.2e-67 Score=496.85 Aligned_cols=410 Identities=66% Similarity=1.143 Sum_probs=332.3
Q ss_pred hhhhhhhhhhhhhHHHHHhHHhcChhHHHHhhhcCCCCCccEEEEccCCCCCCCCCCceEEEEEeecCCCCCCCeEEEEE
Q 014472 5 EEEMRGEIEERLINEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEPPGKDYSVQKMILGTHTSENEPNYLMLAQ 84 (424)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~wk~~~~~~y~~~~~~~~~~p~~~~~~~p~~~~~~~~~~~~~~~~~gt~~~~~~~~~i~i~~ 84 (424)
+|+++++.+++.++|+|++||||+|+|||+++++.++||+|+++|+|+..+..+..++.+++++||++.+ ..|+|++++
T Consensus 9 ~~~~~~~~~~~~~~~~~~~wk~n~~~~y~~~~~~~l~wp~l~~~~~p~~~~~~~~~~~~~~~~~GT~t~~-~~n~i~i~~ 87 (430)
T 2xyi_A 9 AESFDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTKQDGKDYSVHRLILGTHTSD-EQNHLLIAS 87 (430)
T ss_dssp --CHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEECSSCCSCEEECSCCEECTTCSCEEEEEEEECCCSS-SCEEEEEEE
T ss_pred ccccccchhhhhhhHHHhhHhhCChHHHHHHhhcCCCCCceEEEECcccccccCCCcceEEEEEEEcCCC-CCCEEEEEE
Confidence 4445666788999999999999999999999999999999999999998877777888999999999988 899999999
Q ss_pred EEcCCCCCCcccCCCCCcCCCCCCCCCCCCcEEEEEEeccCCceeEEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCC
Q 014472 85 VQLPLDDSENDARHYDDDRSDFGGFGCANGKVQIIQQINHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPL 164 (424)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~~p~~~~~latg~~dg~v~iwd~~~~~~~~~~ 164 (424)
+.+|......+...++++..++..++...++++....+.|.+.|++++|+|+++.+||+|+.+|.|+||++.........
T Consensus 88 ~~lp~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~lat~~~dg~V~vwd~~~~~~~~~~ 167 (430)
T 2xyi_A 88 VQLPSEDAQFDGSHYDNEKGEFGGFGSVCGKIEIEIKINHEGEVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEP 167 (430)
T ss_dssp EEEC--------------------------CEEEEEEEEESSCCSEEEEETTEEEEEEEECSSSCEEEEEGGGSCSSCCT
T ss_pred EECCCCccccccccccccccccccccCCCCceEEEEEEcCCCcEEEEEECCCCCcEEEEECCCCcEEEEECCCcccccCc
Confidence 99886554444555666666777777778899999999999999999999986679999999999999999864333322
Q ss_pred CCCCCCcEEEecCCCCeeeEEecCCCCceEEEEeCCCcEEEEeCCCCCCC-CcccceeeeecCCcceeeEEeeCCCCcEE
Q 014472 165 DGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKN-KSLEAMQIFKVHEGVVEDVAWHLRHEYLF 243 (424)
Q Consensus 165 ~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~-~~~~~~~~~~~~~~~v~~i~~~~~~~~~~ 243 (424)
.+...+...+.+|...|++|+|+|++..+|++|+.||.|++|++..+... ..+.....+.+|...|.+++|+|.+..+|
T Consensus 168 ~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l 247 (430)
T 2xyi_A 168 SGECQPDLRLRGHQKEGYGLSWNPNLNGYLLSASDDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLF 247 (430)
T ss_dssp TCCCCCSEEEECCSSCCCCEEECTTSTTEEEEECTTSCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEE
T ss_pred cccCCCcEEecCCCCCeEEEEeCCCCCCeEEEEeCCCeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEE
Confidence 23467788899999999999999998878999999999999999875321 22233456678999999999999777899
Q ss_pred EEEeCCCeEEEEECCCCCCCCCeeEecccCCCeeEEEecCCCCeEEEEEeCCCcEEEEECCCCCCcceeecCCCCCEEEE
Q 014472 244 GSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATGSTDKTVKLFDLRKISTALHTFDSHKEEVFQV 323 (424)
Q Consensus 244 ~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~ 323 (424)
++++.||.|++||+++....+++..+..|...|++++|+|+++++|++|+.||.|++||++....++..+..|...|+++
T Consensus 248 ~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~h~~~v~~i 327 (430)
T 2xyi_A 248 GSVADDQKLMIWDTRNNNTSKPSHTVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQV 327 (430)
T ss_dssp EEEETTSEEEEEETTCSCSSSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEECCSSCEEEE
T ss_pred EEEeCCCeEEEEECCCCCCCcceeEeecCCCCeEEEEeCCCCCCEEEEEeCCCeEEEEeCCCCCCCeEEeecCCCCEEEE
Confidence 99999999999999987544567777889999999999999988899999999999999998778899999999999999
Q ss_pred EEcCCCCcEEEEEeCCCeEEEeeCCCCCcccCCCccCCCCCeeeEEEcCCCCCcceEEeCCCCCcEEEEEeCCCcEEEEe
Q 014472 324 GWNPKNETILASCCLGRRLMVWDLSRIDEEQTPEDAEDGPPELLFIHGGHTSKISDFSWNPCEDWVISSVAEDNILQIWQ 403 (424)
Q Consensus 324 ~~sp~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iw~ 403 (424)
+|+|+++.+|++++.||.|+|||+......+.......+++++++.+.+|...|++++|+|+++++|++++.||.|+||+
T Consensus 328 ~~sp~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~s~dg~i~iw~ 407 (430)
T 2xyi_A 328 QWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWIICSVSEDNIMQVWQ 407 (430)
T ss_dssp EECSSCTTEEEEEETTSCCEEEEGGGTTCCCCHHHHHHCCTTEEEECCCCSSCEEEEEECSSSTTEEEEEETTSEEEEEE
T ss_pred EECCCCCCEEEEEeCCCcEEEEeCCCCccccCccccccCCcceEEEcCCCCCCceEEEECCCCCCEEEEEECCCCEEEeE
Confidence 99999988899999999999999988655444333445667889999999999999999999998899999999999999
Q ss_pred cCCCCCCCCCCC
Q 014472 404 MAENIYHDEDDL 415 (424)
Q Consensus 404 ~~~~~~~~~~~~ 415 (424)
+..+.+.++++.
T Consensus 408 ~~~~~~~~~~~~ 419 (430)
T 2xyi_A 408 MAENVYNDEEPE 419 (430)
T ss_dssp ECHHHHCC----
T ss_pred cccccccCCCcc
Confidence 999988755543
No 2
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=1.7e-43 Score=324.03 Aligned_cols=254 Identities=21% Similarity=0.294 Sum_probs=215.4
Q ss_pred EeccCCceeEEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCC--CcEEEecCCCCeeeEEecCCCCceEEEEe
Q 014472 121 QINHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACS--PDLRLRGHSTEGYGLSWSKFKEGHLLSGS 198 (424)
Q Consensus 121 ~~~h~~~v~~i~~~p~~~~~latg~~dg~v~iwd~~~~~~~~~~~~~~~--~~~~~~~h~~~v~~l~~~~~~~~~l~s~~ 198 (424)
...|...|++++|+|++ .|++|+.||.|+|||+.+. ... ....+.+|...|++|+|+|++. +|++|+
T Consensus 78 ~~~~~~~v~~~~~s~d~--~l~~~s~dg~v~lWd~~~~--------~~~~~~~~~~~~H~~~V~~v~~spdg~-~l~sgs 146 (344)
T 4gqb_B 78 GVQTEAGVADLTWVGER--GILVASDSGAVELWELDEN--------ETLIVSKFCKYEHDDIVSTVSVLSSGT-QAVSGS 146 (344)
T ss_dssp EEEESSCEEEEEEETTT--EEEEEETTSEEEEEEECTT--------SSCEEEEEEEECCSSCEEEEEECTTSS-EEEEEE
T ss_pred eeccCCCEEEEEEeCCC--eEEEEECCCEEEEEeccCC--------CceeEeeccccCCCCCEEEEEECCCCC-EEEEEe
Confidence 45678899999999975 5789999999999999872 121 1234558999999999999987 799999
Q ss_pred CCCcEEEEeCCCCCCCCcccceeeeecCCcceeeEEeeCCCCcEEEEEeCCCeEEEEECCCCCCCCCeeEe--cccCCCe
Q 014472 199 DDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSV--VAHQSEV 276 (424)
Q Consensus 199 ~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~~s~~~dg~i~i~d~~~~~~~~~~~~~--~~~~~~v 276 (424)
.||+|++||+.++ ..+..+.+|...|++++|++++..+|++++.|++|++||+++++. ...+ ..+...+
T Consensus 147 ~d~~i~iwd~~~~------~~~~~~~~h~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~---~~~~~~~~~~~~~ 217 (344)
T 4gqb_B 147 KDICIKVWDLAQQ------VVLSSYRAHAAQVTCVAASPHKDSVFLSCSEDNRILLWDTRCPKP---ASQIGCSAPGYLP 217 (344)
T ss_dssp TTSCEEEEETTTT------EEEEEECCCSSCEEEEEECSSCTTEEEEEETTSCEEEEETTSSSC---EEECC----CCCE
T ss_pred CCCeEEEEECCCC------cEEEEEcCcCCceEEEEecCCCCCceeeeccccccccccccccce---eeeeecceeeccc
Confidence 9999999999876 456778899999999999999988899999999999999998764 4443 3456679
Q ss_pred eEEEecCCCCeEEEEEeCCCcEEEEECCCCCCcceeecCCCCCEEEEEEcCCCCcEEEEEeCCCeEEEeeCCCCCcccCC
Q 014472 277 NCLAFNPFNEWILATGSTDKTVKLFDLRKISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTP 356 (424)
Q Consensus 277 ~~i~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~s~~~dg~i~iwd~~~~~~~~~~ 356 (424)
++++|+|++..+|++|+.||.|++||+++ ++++..+.+|...|++++|+|++..+|++|+.|++|+|||+..+
T Consensus 218 ~~~~~~p~~~~~l~sg~~dg~v~~wd~~~-~~~~~~~~~h~~~v~~v~fsp~g~~~lasgs~D~~i~vwd~~~~------ 290 (344)
T 4gqb_B 218 TSLAWHPQQSEVFVFGDENGTVSLVDTKS-TSCVLSSAVHSQCVTGLVFSPHSVPFLASLSEDCSLAVLDSSLS------ 290 (344)
T ss_dssp EEEEECSSCTTEEEEEETTSEEEEEESCC---CCEEEECCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTCC------
T ss_pred eeeeecCCCCcceEEeccCCcEEEEECCC-CcEEEEEcCCCCCEEEEEEccCCCeEEEEEeCCCeEEEEECCCC------
Confidence 99999998777899999999999999998 78899999999999999999998778999999999999999863
Q ss_pred CccCCCCCeeeEEEcCCCCCcceEEeCCCCCcEEEEEeCCCcEEEEecCCCCCC
Q 014472 357 EDAEDGPPELLFIHGGHTSKISDFSWNPCEDWVISSVAEDNILQIWQMAENIYH 410 (424)
Q Consensus 357 ~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~~ 410 (424)
+ +..+.+|...|++++|+|+++.+|+|+|.|+.|++|++.+..+.
T Consensus 291 --------~-~~~~~~H~~~V~~v~~sp~~~~llas~s~D~~v~~w~v~~~~~~ 335 (344)
T 4gqb_B 291 --------E-LFRSQAHRDFVRDATWSPLNHSLLTTVGWDHQVVHHVVPTEPLP 335 (344)
T ss_dssp --------E-EEEECCCSSCEEEEEECSSSTTEEEEEETTSCEEEEECCC----
T ss_pred --------c-EEEEcCCCCCEEEEEEeCCCCeEEEEEcCCCeEEEEECCCCCCC
Confidence 2 44568999999999999999888999999999999999876544
No 3
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=7.4e-41 Score=304.08 Aligned_cols=286 Identities=16% Similarity=0.305 Sum_probs=240.1
Q ss_pred CccEEEEccCCCCCCCCCCceEEEEEeecCCCCCCCeEEEEEEEcCCCCCCcccCCCCCcCCCCCCCCCCCCcEEE-EEE
Q 014472 43 PSLTVEWLPDREEPPGKDYSVQKMILGTHTSENEPNYLMLAQVQLPLDDSENDARHYDDDRSDFGGFGCANGKVQI-IQQ 121 (424)
Q Consensus 43 p~~~~~~~p~~~~~~~~~~~~~~~~~gt~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 121 (424)
+..++.|.|+.... ...++.|+ .+..++++.+.-. .... ...
T Consensus 34 ~V~~v~~~~~~~~~------~~~l~tgs-----~D~~v~vW~~~~~--------------------------~~~~~~~l 76 (321)
T 3ow8_A 34 AIWSVAWGTNKKEN------SETVVTGS-----LDDLVKVWKWRDE--------------------------RLDLQWSL 76 (321)
T ss_dssp CEEEEEEC-------------CEEEEEE-----TTSCEEEEEEETT--------------------------EEEEEEEE
T ss_pred cEEEEEEecCCCCC------CCEEEEEc-----CCCCEEEEECCCC--------------------------Ceeeeeee
Confidence 47789998875322 13455554 4567888887411 2222 234
Q ss_pred eccCCceeEEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCCeeeEEecCCCCceEEEEeCCC
Q 014472 122 INHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDDA 201 (424)
Q Consensus 122 ~~h~~~v~~i~~~p~~~~~latg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg 201 (424)
.+|...|.+++|+|++. ++|+|+.|+.|++||+.. ......+..|...+.+++|+|++. +|++|+.||
T Consensus 77 ~gh~~~v~~~~~~~~~~-~l~s~s~D~~i~lWd~~~----------~~~~~~~~~~~~~~~~~~~spdg~-~l~~g~~dg 144 (321)
T 3ow8_A 77 EGHQLGVVSVDISHTLP-IAASSSLDAHIRLWDLEN----------GKQIKSIDAGPVDAWTLAFSPDSQ-YLATGTHVG 144 (321)
T ss_dssp CCCSSCEEEEEECSSSS-EEEEEETTSEEEEEETTT----------TEEEEEEECCTTCCCCEEECTTSS-EEEEECTTS
T ss_pred ccCCCCEEEEEECCCCC-EEEEEeCCCcEEEEECCC----------CCEEEEEeCCCccEEEEEECCCCC-EEEEEcCCC
Confidence 57999999999999886 899999999999999987 455677888999999999999988 799999999
Q ss_pred cEEEEeCCCCCCCCcccceeeeecCCcceeeEEeeCCCCcEEEEEeCCCeEEEEECCCCCCCCCeeEecccCCCeeEEEe
Q 014472 202 QICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAF 281 (424)
Q Consensus 202 ~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~ 281 (424)
.|++|++..+. ....+..|...|.+++|+|+++ +|++|+.||.|++||+++++. +..+.+|..+|++++|
T Consensus 145 ~v~i~~~~~~~------~~~~~~~~~~~v~~~~~spdg~-~lasg~~dg~i~iwd~~~~~~---~~~~~~h~~~v~~l~~ 214 (321)
T 3ow8_A 145 KVNIFGVESGK------KEYSLDTRGKFILSIAYSPDGK-YLASGAIDGIINIFDIATGKL---LHTLEGHAMPIRSLTF 214 (321)
T ss_dssp EEEEEETTTCS------EEEEEECSSSCEEEEEECTTSS-EEEEEETTSCEEEEETTTTEE---EEEECCCSSCCCEEEE
T ss_pred cEEEEEcCCCc------eeEEecCCCceEEEEEECCCCC-EEEEEcCCCeEEEEECCCCcE---EEEEcccCCceeEEEE
Confidence 99999998763 3455667888999999999987 567999999999999998653 7778899999999999
Q ss_pred cCCCCeEEEEEeCCCcEEEEECCCCCCcceeecCCCCCEEEEEEcCCCCcEEEEEeCCCeEEEeeCCCCCcccCCCccCC
Q 014472 282 NPFNEWILATGSTDKTVKLFDLRKISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPEDAED 361 (424)
Q Consensus 282 ~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~ 361 (424)
+|++. +|++|+.|+.|++||++. ...+..+.+|...|.+++|+|++. +|++++.|+.|+|||+.++
T Consensus 215 spd~~-~l~s~s~dg~i~iwd~~~-~~~~~~~~~h~~~v~~~~~sp~~~-~l~s~s~D~~v~iwd~~~~----------- 280 (321)
T 3ow8_A 215 SPDSQ-LLVTASDDGYIKIYDVQH-ANLAGTLSGHASWVLNVAFCPDDT-HFVSSSSDKSVKVWDVGTR----------- 280 (321)
T ss_dssp CTTSC-EEEEECTTSCEEEEETTT-CCEEEEECCCSSCEEEEEECTTSS-EEEEEETTSCEEEEETTTT-----------
T ss_pred cCCCC-EEEEEcCCCeEEEEECCC-cceeEEEcCCCCceEEEEECCCCC-EEEEEeCCCcEEEEeCCCC-----------
Confidence 99998 699999999999999998 677889999999999999999996 7999999999999999874
Q ss_pred CCCeeeEEEcCCCCCcceEEeCCCCCcEEEEEeCCCcEEEEecC
Q 014472 362 GPPELLFIHGGHTSKISDFSWNPCEDWVISSVAEDNILQIWQMA 405 (424)
Q Consensus 362 ~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iw~~~ 405 (424)
.++..+.+|...|++++|+|+++ .|++++.|+.|+|||+.
T Consensus 281 ---~~~~~~~~h~~~v~~v~~s~~g~-~l~s~~~d~~i~vwd~p 320 (321)
T 3ow8_A 281 ---TCVHTFFDHQDQVWGVKYNGNGS-KIVSVGDDQEIHIYDCP 320 (321)
T ss_dssp ---EEEEEECCCSSCEEEEEECTTSS-EEEEEETTCCEEEEECC
T ss_pred ---EEEEEEcCCCCcEEEEEECCCCC-EEEEEeCCCeEEEEeCC
Confidence 66788889999999999999999 69999999999999963
No 4
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=2.7e-41 Score=304.80 Aligned_cols=251 Identities=23% Similarity=0.344 Sum_probs=218.4
Q ss_pred eccCCceeEEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCCeeeEEecCCCCceEEEEeCCC
Q 014472 122 INHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDDA 201 (424)
Q Consensus 122 ~~h~~~v~~i~~~p~~~~~latg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg 201 (424)
.+|.+.|++++|+|+++ +||+|+.||.|+|||+.+ ......+..|...|.+++|+|++. +|++|+.|+
T Consensus 10 ~~h~~~V~~~~fsp~~~-~l~s~~~dg~v~lWd~~~----------~~~~~~~~~~~~~v~~~~~~~~~~-~l~s~s~d~ 77 (304)
T 2ynn_A 10 SNRSDRVKGIDFHPTEP-WVLTTLYSGRVELWNYET----------QVEVRSIQVTETPVRAGKFIARKN-WIIVGSDDF 77 (304)
T ss_dssp EEECSCEEEEEECSSSS-EEEEEETTSEEEEEETTT----------TEEEEEEECCSSCEEEEEEEGGGT-EEEEEETTS
T ss_pred cCCCCceEEEEECCCCC-EEEEEcCCCcEEEEECCC----------CceeEEeeccCCcEEEEEEeCCCC-EEEEECCCC
Confidence 47999999999999987 899999999999999987 455678889999999999999887 799999999
Q ss_pred cEEEEeCCCCCCCCcccceeeeecCCcceeeEEeeCCCCcEEEEEeCCCeEEEEECCCCCCCCCeeEecccCCCeeEEEe
Q 014472 202 QICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAF 281 (424)
Q Consensus 202 ~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~ 281 (424)
.|++||+.++ ..+..+.+|...|++++|+|+++ ++++|+.|++|++||++++.. ....+.+|...|.+++|
T Consensus 78 ~i~vwd~~~~------~~~~~~~~h~~~v~~~~~~~~~~-~l~sgs~D~~v~lWd~~~~~~--~~~~~~~h~~~v~~v~~ 148 (304)
T 2ynn_A 78 RIRVFNYNTG------EKVVDFEAHPDYIRSIAVHPTKP-YVLSGSDDLTVKLWNWENNWA--LEQTFEGHEHFVMCVAF 148 (304)
T ss_dssp EEEEEETTTC------CEEEEEECCSSCEEEEEECSSSS-EEEEEETTSCEEEEEGGGTTE--EEEEECCCCSCEEEEEE
T ss_pred EEEEEECCCC------cEEEEEeCCCCcEEEEEEcCCCC-EEEEECCCCeEEEEECCCCcc--hhhhhcccCCcEEEEEE
Confidence 9999999876 34567788999999999999987 567999999999999987542 34567889999999999
Q ss_pred cCCCCeEEEEEeCCCcEEEEECCCCCCcceeecCCCCCEEEEEEcC--CCCcEEEEEeCCCeEEEeeCCCCCcccCCCcc
Q 014472 282 NPFNEWILATGSTDKTVKLFDLRKISTALHTFDSHKEEVFQVGWNP--KNETILASCCLGRRLMVWDLSRIDEEQTPEDA 359 (424)
Q Consensus 282 ~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~sp--~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~ 359 (424)
+|.+..+|++|+.|++|++||++...........|...+..+.|+| ++ .+|++++.|+.|++||++++
T Consensus 149 ~p~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-~~l~s~s~D~~i~iWd~~~~--------- 218 (304)
T 2ynn_A 149 NPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDK-PYMITASDDLTIKIWDYQTK--------- 218 (304)
T ss_dssp CTTCTTEEEEEETTSEEEEEETTCSSCSEEEECCCTTCEEEEEECCSTTC-CEEEEEETTSEEEEEETTTT---------
T ss_pred CCCCCCEEEEEeCCCeEEEEECCCCCccceeccCCcCcEEEEEEEEcCCC-CEEEEEcCCCeEEEEeCCCC---------
Confidence 9965558999999999999999874444444456778999999987 44 48999999999999999874
Q ss_pred CCCCCeeeEEEcCCCCCcceEEeCCCCCcEEEEEeCCCcEEEEecCCCCC
Q 014472 360 EDGPPELLFIHGGHTSKISDFSWNPCEDWVISSVAEDNILQIWQMAENIY 409 (424)
Q Consensus 360 ~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~ 409 (424)
.++..+.+|...|..++|+|+++ +|++++.||.|++||+.++.+
T Consensus 219 -----~~~~~~~~h~~~v~~~~~~p~~~-~l~s~s~Dg~i~iWd~~~~~~ 262 (304)
T 2ynn_A 219 -----SCVATLEGHMSNVSFAVFHPTLP-IIISGSEDGTLKIWNSSTYKV 262 (304)
T ss_dssp -----EEEEEEECCSSCEEEEEECSSSS-EEEEEETTSCEEEEETTTCCE
T ss_pred -----ccceeeCCCCCCEEEEEECCCCC-EEEEEcCCCeEEEEECCCCce
Confidence 66788899999999999999999 799999999999999988654
No 5
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=1.7e-41 Score=312.94 Aligned_cols=255 Identities=18% Similarity=0.281 Sum_probs=210.8
Q ss_pred EEeccCCceeEEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCCeeeEEecCCCCceEEEEeC
Q 014472 120 QQINHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSD 199 (424)
Q Consensus 120 ~~~~h~~~v~~i~~~p~~~~~latg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~ 199 (424)
....|...|++++|+|++. +++++.||.|+|||+...... ........+|...|++|+|+|++. +|++|+.
T Consensus 89 ~~~~~~~~V~~~~~s~d~~--~l~~s~dg~v~lWd~~~~~~~------~~~~~~~~~h~~~V~~v~~spdg~-~l~sgs~ 159 (357)
T 4g56_B 89 AGVQTEAGVTDVAWVSEKG--ILVASDSGAVELWEILEKESL------LVNKFAKYEHDDIVKTLSVFSDGT-QAVSGGK 159 (357)
T ss_dssp EEEECSSCEEEEEEETTTE--EEEEETTSCEEEC--------------CCCCEEECCCSSCEEEEEECSSSS-EEEEEET
T ss_pred ccCCCCCCEEEEEEcCCCC--EEEEECCCEEEEeecccccee------EEEeeccCCCCCCEEEEEECCCCC-EEEEEeC
Confidence 3557999999999999874 556788999999999762111 122345568999999999999887 7999999
Q ss_pred CCcEEEEeCCCCCCCCcccceeeeecCCcceeeEEeeCCCCcEEEEEeCCCeEEEEECCCCCCCCCeeEecccCCCeeEE
Q 014472 200 DAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCL 279 (424)
Q Consensus 200 dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~i 279 (424)
||.|++||++++ ..+..+.+|...|++++|++++..++++++.||.|++||+++++... ......+...++++
T Consensus 160 dg~v~iwd~~~~------~~~~~~~~h~~~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~~~-~~~~~~~~~~v~~v 232 (357)
T 4g56_B 160 DFSVKVWDLSQK------AVLKSYNAHSSEVNCVAACPGKDTIFLSCGEDGRILLWDTRKPKPAT-RIDFCASDTIPTSV 232 (357)
T ss_dssp TSCEEEEETTTT------EEEEEECCCSSCEEEEEECTTCSSCEEEEETTSCEEECCTTSSSCBC-BCCCTTCCSCEEEE
T ss_pred CCeEEEEECCCC------cEEEEEcCCCCCEEEEEEccCCCceeeeeccCCceEEEECCCCceee-eeeeccccccccch
Confidence 999999999876 45667788999999999999988788899999999999999876422 22334577889999
Q ss_pred EecCCCCeEEEEEeCCCcEEEEECCCCCCcceeecCCCCCEEEEEEcCCCCcEEEEEeCCCeEEEeeCCCCCcccCCCcc
Q 014472 280 AFNPFNEWILATGSTDKTVKLFDLRKISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPEDA 359 (424)
Q Consensus 280 ~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~ 359 (424)
+|+|++..+|++|+.|+.|++||+++ ..++..+.+|...|++++|+|++..+|++++.|++|+|||++++
T Consensus 233 ~~sp~~~~~la~g~~d~~i~~wd~~~-~~~~~~~~~~~~~v~~l~~sp~~~~~lasgs~D~~i~iwd~~~~--------- 302 (357)
T 4g56_B 233 TWHPEKDDTFACGDETGNVSLVNIKN-PDSAQTSAVHSQNITGLAYSYHSSPFLASISEDCTVAVLDADFS--------- 302 (357)
T ss_dssp EECTTSTTEEEEEESSSCEEEEESSC-GGGCEEECCCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTSC---------
T ss_pred hhhhcccceEEEeecccceeEEECCC-CcEeEEEeccceeEEEEEEcCCCCCEEEEEeCCCEEEEEECCCC---------
Confidence 99999877899999999999999998 68889999999999999999998778999999999999999874
Q ss_pred CCCCCeeeEEEcCCCCCcceEEeCC-CCCcEEEEEeCCCcEEEEecCCC
Q 014472 360 EDGPPELLFIHGGHTSKISDFSWNP-CEDWVISSVAEDNILQIWQMAEN 407 (424)
Q Consensus 360 ~~~~~~~~~~~~~h~~~v~~~~~~~-~~~~~l~s~~~d~~i~iw~~~~~ 407 (424)
+++ ...+|...|++++|+| ++. +|+|++.||.|++|++...
T Consensus 303 -----~~~-~~~~H~~~V~~vafsP~d~~-~l~s~s~Dg~v~iW~~~~~ 344 (357)
T 4g56_B 303 -----EVF-RDLSHRDFVTGVAWSPLDHS-KFTTVGWDHKVLHHHLPSE 344 (357)
T ss_dssp -----EEE-EECCCSSCEEEEEECSSSTT-EEEEEETTSCEEEEECC--
T ss_pred -----cEe-EECCCCCCEEEEEEeCCCCC-EEEEEcCCCeEEEEECCCC
Confidence 333 3458999999999999 566 7999999999999999764
No 6
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=4.8e-41 Score=315.92 Aligned_cols=246 Identities=20% Similarity=0.363 Sum_probs=217.9
Q ss_pred EeccCCceeEEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCCeeeEEecCCCCceEEEEeCC
Q 014472 121 QINHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDD 200 (424)
Q Consensus 121 ~~~h~~~v~~i~~~p~~~~~latg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~d 200 (424)
..+|.+.|++++|+|++. +||+|+.||+|+|||+.. ......+.+|...|.+++|+|++. +|++|+.|
T Consensus 146 l~~h~~~V~~v~~~~~~~-~l~sgs~D~~i~iwd~~~----------~~~~~~~~~h~~~V~~v~~~p~~~-~l~s~s~D 213 (410)
T 1vyh_C 146 LKGHTDSVQDISFDHSGK-LLASCSADMTIKLWDFQG----------FECIRTMHGHDHNVSSVSIMPNGD-HIVSASRD 213 (410)
T ss_dssp ECCCSSCEEEEEECTTSS-EEEEEETTSCCCEEETTS----------SCEEECCCCCSSCEEEEEECSSSS-EEEEEETT
T ss_pred EeccCCcEEEEEEcCCCC-EEEEEeCCCeEEEEeCCC----------CceeEEEcCCCCCEEEEEEeCCCC-EEEEEeCC
Confidence 347999999999999886 899999999999999976 455667889999999999999887 79999999
Q ss_pred CcEEEEeCCCCCCCCcccceeeeecCCcceeeEEeeCCCCcEEEEEeCCCeEEEEECCCCCCCCCeeEecccCCCeeEEE
Q 014472 201 AQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLA 280 (424)
Q Consensus 201 g~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~ 280 (424)
++|++||+.++ ..+..+.+|...|.++.|+|++. ++++|+.|+.|++||+++... ...+..|...|.+++
T Consensus 214 ~~i~~wd~~~~------~~~~~~~~h~~~v~~~~~~~~g~-~l~s~s~D~~v~vwd~~~~~~---~~~~~~h~~~v~~~~ 283 (410)
T 1vyh_C 214 KTIKMWEVQTG------YCVKTFTGHREWVRMVRPNQDGT-LIASCSNDQTVRVWVVATKEC---KAELREHRHVVECIS 283 (410)
T ss_dssp SEEEEEETTTC------CEEEEEECCSSCEEEEEECTTSS-EEEEEETTSCEEEEETTTCCE---EEEECCCSSCEEEEE
T ss_pred CeEEEEECCCC------cEEEEEeCCCccEEEEEECCCCC-EEEEEcCCCeEEEEECCCCce---eeEecCCCceEEEEE
Confidence 99999999876 34667788999999999999986 667999999999999998654 677888999999999
Q ss_pred ecCCC-------------------CeEEEEEeCCCcEEEEECCCCCCcceeecCCCCCEEEEEEcCCCCcEEEEEeCCCe
Q 014472 281 FNPFN-------------------EWILATGSTDKTVKLFDLRKISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRR 341 (424)
Q Consensus 281 ~~~~~-------------------~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~s~~~dg~ 341 (424)
|+|++ ..+|++|+.|+.|++||+++ +.++..+.+|...|.+++|+|++. +|++|+.||.
T Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~i~iwd~~~-~~~~~~~~~h~~~v~~v~~~~~g~-~l~s~s~D~~ 361 (410)
T 1vyh_C 284 WAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVST-GMCLMTLVGHDNWVRGVLFHSGGK-FILSCADDKT 361 (410)
T ss_dssp ECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEEEETTT-TEEEEEEECCSSCEEEEEECSSSS-CEEEEETTTE
T ss_pred EcCcccccchhhhccccccccCCCCCEEEEEeCCCeEEEEECCC-CceEEEEECCCCcEEEEEEcCCCC-EEEEEeCCCe
Confidence 99962 23799999999999999998 788899999999999999999996 6889999999
Q ss_pred EEEeeCCCCCcccCCCccCCCCCeeeEEEcCCCCCcceEEeCCCCCcEEEEEeCCCcEEEEecC
Q 014472 342 LMVWDLSRIDEEQTPEDAEDGPPELLFIHGGHTSKISDFSWNPCEDWVISSVAEDNILQIWQMA 405 (424)
Q Consensus 342 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iw~~~ 405 (424)
|++||+... +++..+.+|...|++++|+|+++ +|++|+.|+.|+||++.
T Consensus 362 i~vwd~~~~--------------~~~~~~~~h~~~v~~l~~~~~~~-~l~sgs~D~~i~vW~~r 410 (410)
T 1vyh_C 362 LRVWDYKNK--------------RCMKTLNAHEHFVTSLDFHKTAP-YVVTGSVDQTVKVWECR 410 (410)
T ss_dssp EEEECCTTS--------------CCCEEEECCSSCEEEEEECSSSS-CEEEEETTSEEEEEC--
T ss_pred EEEEECCCC--------------ceEEEEcCCCCcEEEEEEcCCCC-EEEEEeCCCcEEEEeCC
Confidence 999999764 45667789999999999999999 69999999999999863
No 7
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=2.6e-40 Score=303.78 Aligned_cols=306 Identities=19% Similarity=0.345 Sum_probs=235.8
Q ss_pred CccEEEEccCCCCCCCCCCceEEEEEeecCCCCCCCeEEEEEEEcCCCCCCcccCCCCCcCCCCCCCCCCCCcEEEEEEe
Q 014472 43 PSLTVEWLPDREEPPGKDYSVQKMILGTHTSENEPNYLMLAQVQLPLDDSENDARHYDDDRSDFGGFGCANGKVQIIQQI 122 (424)
Q Consensus 43 p~~~~~~~p~~~~~~~~~~~~~~~~~gt~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 122 (424)
++..++|.|+. ..++.|+ .+..|+++.+.-. ..........
T Consensus 18 ~v~~l~~sp~g----------~~las~~-----~D~~i~iw~~~~~------------------------~~~~~~~~~~ 58 (345)
T 3fm0_A 18 RCWFLAWNPAG----------TLLASCG-----GDRRIRIWGTEGD------------------------SWICKSVLSE 58 (345)
T ss_dssp CEEEEEECTTS----------SCEEEEE-----TTSCEEEEEEETT------------------------EEEEEEEECS
T ss_pred cEEEEEECCCC----------CEEEEEc-----CCCeEEEEEcCCC------------------------cceeeeeecc
Confidence 46788999876 3455554 4567888876311 0001112224
Q ss_pred ccCCceeEEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCCeeeEEecCCCCceEEEEeCCCc
Q 014472 123 NHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDDAQ 202 (424)
Q Consensus 123 ~h~~~v~~i~~~p~~~~~latg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~ 202 (424)
+|.+.|.+++|+|++. +||+|+.|+.|+||++.. ........+.+|...|.+++|+|++. +|++|+.|+.
T Consensus 59 ~h~~~v~~~~~sp~g~-~l~s~s~D~~v~iw~~~~--------~~~~~~~~~~~h~~~v~~v~~sp~~~-~l~s~s~D~~ 128 (345)
T 3fm0_A 59 GHQRTVRKVAWSPCGN-YLASASFDATTCIWKKNQ--------DDFECVTTLEGHENEVKSVAWAPSGN-LLATCSRDKS 128 (345)
T ss_dssp SCSSCEEEEEECTTSS-EEEEEETTSCEEEEEECC--------C-EEEEEEECCCSSCEEEEEECTTSS-EEEEEETTSC
T ss_pred ccCCcEEEEEECCCCC-EEEEEECCCcEEEEEccC--------CCeEEEEEccCCCCCceEEEEeCCCC-EEEEEECCCe
Confidence 7999999999999886 899999999999999876 22345677889999999999999887 8999999999
Q ss_pred EEEEeCCCCCCCCcccceeeeecCCcceeeEEeeCCCCcEEEEEeCCCeEEEEECCCCCCCCCeeEecccCCCeeEEEec
Q 014472 203 ICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFN 282 (424)
Q Consensus 203 i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~ 282 (424)
|++||+.... ....+..+.+|...|.+++|+|++. +|++++.|+.|++||++.... .....+.+|...|++++|+
T Consensus 129 v~iwd~~~~~---~~~~~~~~~~h~~~v~~~~~~p~~~-~l~s~s~d~~i~~w~~~~~~~-~~~~~~~~h~~~v~~l~~s 203 (345)
T 3fm0_A 129 VWVWEVDEED---EYECVSVLNSHTQDVKHVVWHPSQE-LLASASYDDTVKLYREEEDDW-VCCATLEGHESTVWSLAFD 203 (345)
T ss_dssp EEEEEECTTS---CEEEEEEECCCCSCEEEEEECSSSS-CEEEEETTSCEEEEEEETTEE-EEEEEECCCSSCEEEEEEC
T ss_pred EEEEECCCCC---CeEEEEEecCcCCCeEEEEECCCCC-EEEEEeCCCcEEEEEecCCCE-EEEEEecCCCCceEEEEEC
Confidence 9999997653 2234566778999999999999987 567999999999999987542 2345778899999999999
Q ss_pred CCCCeEEEEEeCCCcEEEEECCCCCC--------------cceeecC-CCCCEEEEEEcCCCCcEEEEEeCCCeEEEeeC
Q 014472 283 PFNEWILATGSTDKTVKLFDLRKIST--------------ALHTFDS-HKEEVFQVGWNPKNETILASCCLGRRLMVWDL 347 (424)
Q Consensus 283 ~~~~~~l~~g~~dg~i~iwd~~~~~~--------------~~~~~~~-~~~~v~~~~~sp~~~~~l~s~~~dg~i~iwd~ 347 (424)
|++. +|++|+.|++|++||.+.... ++..+.+ |...|.+++|+|++. +|++++.|+.|++|+.
T Consensus 204 p~g~-~l~s~s~D~~v~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~-~l~s~~~d~~i~vw~~ 281 (345)
T 3fm0_A 204 PSGQ-RLASCSDDRTVRIWRQYLPGNEQGVACSGSDPSWKCICTLSGFHSRTIYDIAWCQLTG-ALATACGDDAIRVFQE 281 (345)
T ss_dssp TTSS-EEEEEETTSCEEEEEEECTTCTTCCCCC---CEEEEEEEECSSCSSCEEEEEECTTTC-CEEEEETTSCEEEEEE
T ss_pred CCCC-EEEEEeCCCeEEEeccccCCCCccceeeccCCccceeEEecCCCCCcEEEEEEecCCC-EEEEEeCCCeEEEEEe
Confidence 9998 699999999999999754221 1233333 888999999999996 6899999999999998
Q ss_pred CCCCcccCCCccCCCCCeeeEEEcCCCCCcceEEeCCCCCcEEEEEeCCCcEEEEecCCCCC
Q 014472 348 SRIDEEQTPEDAEDGPPELLFIHGGHTSKISDFSWNPCEDWVISSVAEDNILQIWQMAENIY 409 (424)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~ 409 (424)
.......... .......+.+|...|++++|+|+++.+|+|++.||.|++|++.++..
T Consensus 282 ~~~~~~~~~~-----~~~~~~~~~~h~~~V~~v~~~p~~~~~laS~s~Dg~v~~W~~~~~~~ 338 (345)
T 3fm0_A 282 DPNSDPQQPT-----FSLTAHLHQAHSQDVNCVAWNPKEPGLLASCSDDGEVAFWKYQRPEG 338 (345)
T ss_dssp CTTSCTTSCC-----EEEEEEETTSSSSCEEEEEECSSSTTEEEEEETTSCEEEEEECC---
T ss_pred CCCCCcceee-----EEEEeeecccccCcEeEeEEeCCCceEEEEcCCCCcEEEEEecCCCC
Confidence 7643221100 00112334689999999999999866899999999999999988754
No 8
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=2.6e-40 Score=310.94 Aligned_cols=249 Identities=22% Similarity=0.371 Sum_probs=223.4
Q ss_pred EeccCCceeEEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCCeeeEEecCCCCceEEEEeCC
Q 014472 121 QINHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDD 200 (424)
Q Consensus 121 ~~~h~~~v~~i~~~p~~~~~latg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~d 200 (424)
..+|.++|++++|+|++. +||+|+.||.|+|||+.+ ......+.+|...|.+++|+|++. +|++|+.|
T Consensus 104 l~gh~~~V~~~~~~p~~~-~l~s~s~Dg~i~vwd~~~----------~~~~~~l~~h~~~V~~v~~~~~~~-~l~sgs~D 171 (410)
T 1vyh_C 104 LSGHRSPVTRVIFHPVFS-VMVSASEDATIKVWDYET----------GDFERTLKGHTDSVQDISFDHSGK-LLASCSAD 171 (410)
T ss_dssp EECCSSCEEEEEECSSSS-EEEEEESSSCEEEEETTT----------CCCCEEECCCSSCEEEEEECTTSS-EEEEEETT
T ss_pred ecccCCcEEEEEEcCCCC-EEEEEeCCCeEEEEECCC----------CcEEEEEeccCCcEEEEEEcCCCC-EEEEEeCC
Confidence 458999999999999887 899999999999999987 455678999999999999999887 89999999
Q ss_pred CcEEEEeCCCCCCCCcccceeeeecCCcceeeEEeeCCCCcEEEEEeCCCeEEEEECCCCCCCCCeeEecccCCCeeEEE
Q 014472 201 AQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLA 280 (424)
Q Consensus 201 g~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~ 280 (424)
|+|++||+.+. ..+..+.+|...|.+++|+|++. .+++|+.|++|++||++++.. +..+.+|...|.+++
T Consensus 172 ~~i~iwd~~~~------~~~~~~~~h~~~V~~v~~~p~~~-~l~s~s~D~~i~~wd~~~~~~---~~~~~~h~~~v~~~~ 241 (410)
T 1vyh_C 172 MTIKLWDFQGF------ECIRTMHGHDHNVSSVSIMPNGD-HIVSASRDKTIKMWEVQTGYC---VKTFTGHREWVRMVR 241 (410)
T ss_dssp SCCCEEETTSS------CEEECCCCCSSCEEEEEECSSSS-EEEEEETTSEEEEEETTTCCE---EEEEECCSSCEEEEE
T ss_pred CeEEEEeCCCC------ceeEEEcCCCCCEEEEEEeCCCC-EEEEEeCCCeEEEEECCCCcE---EEEEeCCCccEEEEE
Confidence 99999999765 35666788999999999999987 567999999999999998664 778889999999999
Q ss_pred ecCCCCeEEEEEeCCCcEEEEECCCCCCcceeecCCCCCEEEEEEcCCC-------------------CcEEEEEeCCCe
Q 014472 281 FNPFNEWILATGSTDKTVKLFDLRKISTALHTFDSHKEEVFQVGWNPKN-------------------ETILASCCLGRR 341 (424)
Q Consensus 281 ~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~sp~~-------------------~~~l~s~~~dg~ 341 (424)
|+|++. +|++|+.|+.|++||+++ ......+..|...|.+++|+|++ ..+|++|+.|+.
T Consensus 242 ~~~~g~-~l~s~s~D~~v~vwd~~~-~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~ 319 (410)
T 1vyh_C 242 PNQDGT-LIASCSNDQTVRVWVVAT-KECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKT 319 (410)
T ss_dssp ECTTSS-EEEEEETTSCEEEEETTT-CCEEEEECCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSE
T ss_pred ECCCCC-EEEEEcCCCeEEEEECCC-CceeeEecCCCceEEEEEEcCcccccchhhhccccccccCCCCCEEEEEeCCCe
Confidence 999988 799999999999999998 67888899999999999999963 247999999999
Q ss_pred EEEeeCCCCCcccCCCccCCCCCeeeEEEcCCCCCcceEEeCCCCCcEEEEEeCCCcEEEEecCCCC
Q 014472 342 LMVWDLSRIDEEQTPEDAEDGPPELLFIHGGHTSKISDFSWNPCEDWVISSVAEDNILQIWQMAENI 408 (424)
Q Consensus 342 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~ 408 (424)
|++||++++ .++..+.+|...|++++|+|+++ +|++++.|+.|++||+.++.
T Consensus 320 i~iwd~~~~--------------~~~~~~~~h~~~v~~v~~~~~g~-~l~s~s~D~~i~vwd~~~~~ 371 (410)
T 1vyh_C 320 IKMWDVSTG--------------MCLMTLVGHDNWVRGVLFHSGGK-FILSCADDKTLRVWDYKNKR 371 (410)
T ss_dssp EEEEETTTT--------------EEEEEEECCSSCEEEEEECSSSS-CEEEEETTTEEEEECCTTSC
T ss_pred EEEEECCCC--------------ceEEEEECCCCcEEEEEEcCCCC-EEEEEeCCCeEEEEECCCCc
Confidence 999999875 56778889999999999999999 58899999999999997764
No 9
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=2.9e-40 Score=300.14 Aligned_cols=253 Identities=17% Similarity=0.284 Sum_probs=219.7
Q ss_pred EEEeccCCceeEEEecCCC---CcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCCeeeEEecCCCCceEE
Q 014472 119 IQQINHDGEVNRARYMPQN---PFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLL 195 (424)
Q Consensus 119 ~~~~~h~~~v~~i~~~p~~---~~~latg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~ 195 (424)
....+|.+.|++++|+|++ ..+||+|+.|++|+||++.. ........+.+|...|.+++|++++. +++
T Consensus 26 ~~~~~H~~~V~~v~~~~~~~~~~~~l~tgs~D~~v~vW~~~~--------~~~~~~~~l~gh~~~v~~~~~~~~~~-~l~ 96 (321)
T 3ow8_A 26 KQEQAHDDAIWSVAWGTNKKENSETVVTGSLDDLVKVWKWRD--------ERLDLQWSLEGHQLGVVSVDISHTLP-IAA 96 (321)
T ss_dssp EETTSSSSCEEEEEEC-------CEEEEEETTSCEEEEEEET--------TEEEEEEEECCCSSCEEEEEECSSSS-EEE
T ss_pred eecccCCCcEEEEEEecCCCCCCCEEEEEcCCCCEEEEECCC--------CCeeeeeeeccCCCCEEEEEECCCCC-EEE
Confidence 3344799999999999852 34899999999999999876 22334456889999999999999887 799
Q ss_pred EEeCCCcEEEEeCCCCCCCCcccceeeeecCCcceeeEEeeCCCCcEEEEEeCCCeEEEEECCCCCCCCCeeEecccCCC
Q 014472 196 SGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSE 275 (424)
Q Consensus 196 s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~ 275 (424)
+++.|++|++||+.++ +.+..+..|...+.+++|+|++. .|++++.||.|++||++++.. ...+..|...
T Consensus 97 s~s~D~~i~lWd~~~~------~~~~~~~~~~~~~~~~~~spdg~-~l~~g~~dg~v~i~~~~~~~~---~~~~~~~~~~ 166 (321)
T 3ow8_A 97 SSSLDAHIRLWDLENG------KQIKSIDAGPVDAWTLAFSPDSQ-YLATGTHVGKVNIFGVESGKK---EYSLDTRGKF 166 (321)
T ss_dssp EEETTSEEEEEETTTT------EEEEEEECCTTCCCCEEECTTSS-EEEEECTTSEEEEEETTTCSE---EEEEECSSSC
T ss_pred EEeCCCcEEEEECCCC------CEEEEEeCCCccEEEEEECCCCC-EEEEEcCCCcEEEEEcCCCce---eEEecCCCce
Confidence 9999999999999876 34566677888999999999987 567999999999999998653 6667788899
Q ss_pred eeEEEecCCCCeEEEEEeCCCcEEEEECCCCCCcceeecCCCCCEEEEEEcCCCCcEEEEEeCCCeEEEeeCCCCCcccC
Q 014472 276 VNCLAFNPFNEWILATGSTDKTVKLFDLRKISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQT 355 (424)
Q Consensus 276 v~~i~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~s~~~dg~i~iwd~~~~~~~~~ 355 (424)
|.+++|+|+++ +|++|+.||.|++||+++ ++++..+.+|..+|.+++|+|+++ +|++++.|+.|+|||++..
T Consensus 167 v~~~~~spdg~-~lasg~~dg~i~iwd~~~-~~~~~~~~~h~~~v~~l~~spd~~-~l~s~s~dg~i~iwd~~~~----- 238 (321)
T 3ow8_A 167 ILSIAYSPDGK-YLASGAIDGIINIFDIAT-GKLLHTLEGHAMPIRSLTFSPDSQ-LLVTASDDGYIKIYDVQHA----- 238 (321)
T ss_dssp EEEEEECTTSS-EEEEEETTSCEEEEETTT-TEEEEEECCCSSCCCEEEECTTSC-EEEEECTTSCEEEEETTTC-----
T ss_pred EEEEEECCCCC-EEEEEcCCCeEEEEECCC-CcEEEEEcccCCceeEEEEcCCCC-EEEEEcCCCeEEEEECCCc-----
Confidence 99999999998 699999999999999998 788899999999999999999996 7999999999999999864
Q ss_pred CCccCCCCCeeeEEEcCCCCCcceEEeCCCCCcEEEEEeCCCcEEEEecCCCC
Q 014472 356 PEDAEDGPPELLFIHGGHTSKISDFSWNPCEDWVISSVAEDNILQIWQMAENI 408 (424)
Q Consensus 356 ~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~ 408 (424)
.+...+.+|...|.+++|+|+++ +|++++.|+.|+|||+.++.
T Consensus 239 ---------~~~~~~~~h~~~v~~~~~sp~~~-~l~s~s~D~~v~iwd~~~~~ 281 (321)
T 3ow8_A 239 ---------NLAGTLSGHASWVLNVAFCPDDT-HFVSSSSDKSVKVWDVGTRT 281 (321)
T ss_dssp ---------CEEEEECCCSSCEEEEEECTTSS-EEEEEETTSCEEEEETTTTE
T ss_pred ---------ceeEEEcCCCCceEEEEECCCCC-EEEEEeCCCcEEEEeCCCCE
Confidence 55677889999999999999999 69999999999999998764
No 10
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=4.9e-39 Score=294.72 Aligned_cols=246 Identities=23% Similarity=0.348 Sum_probs=211.5
Q ss_pred EeccCCceeEEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCCeeeEEecCCCCceEEEEeCC
Q 014472 121 QINHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDD 200 (424)
Q Consensus 121 ~~~h~~~v~~i~~~p~~~~~latg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~d 200 (424)
...|...|.+++|+|++. +||+|+.|+.|++|++.... ........+.+|...|.++.|++++ .+++++.|
T Consensus 93 ~~~~~~~v~~~~~s~~~~-~l~s~~~d~~v~iw~~~~~~------~~~~~~~~~~~h~~~v~~~~~~~~~--~l~s~s~d 163 (340)
T 1got_B 93 IPLRSSWVMTCAYAPSGN-YVACGGLDNICSIYNLKTRE------GNVRVSRELAGHTGYLSCCRFLDDN--QIVTSSGD 163 (340)
T ss_dssp EECSSSCEEEEEECTTSS-EEEEEETTCEEEEEETTTCS------BSCEEEEEEECCSSCEEEEEEEETT--EEEEEETT
T ss_pred eecCCccEEEEEECCCCC-EEEEEeCCCeEEEEECccCC------CcceeEEEecCCCccEEEEEECCCC--cEEEEECC
Confidence 346889999999999886 89999999999999997621 1123455678999999999999865 49999999
Q ss_pred CcEEEEeCCCCCCCCcccceeeeecCCcceeeEEeeCCCCcEEEEEeCCCeEEEEECCCCCCCCCeeEecccCCCeeEEE
Q 014472 201 AQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLA 280 (424)
Q Consensus 201 g~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~ 280 (424)
+.|++||+.++ ..+..+.+|...|.+++|+|++. ++++|+.|+.|++||++++.. +..+.+|...|++++
T Consensus 164 ~~i~~wd~~~~------~~~~~~~~h~~~v~~~~~~~~~~-~l~sg~~d~~v~~wd~~~~~~---~~~~~~h~~~v~~v~ 233 (340)
T 1got_B 164 TTCALWDIETG------QQTTTFTGHTGDVMSLSLAPDTR-LFVSGACDASAKLWDVREGMC---RQTFTGHESDINAIC 233 (340)
T ss_dssp SCEEEEETTTT------EEEEEECCCSSCEEEEEECTTSS-EEEEEETTSCEEEEETTTCSE---EEEECCCSSCEEEEE
T ss_pred CcEEEEECCCC------cEEEEEcCCCCceEEEEECCCCC-EEEEEeCCCcEEEEECCCCee---EEEEcCCcCCEEEEE
Confidence 99999999876 34566788999999999999986 677999999999999998653 777889999999999
Q ss_pred ecCCCCeEEEEEeCCCcEEEEECCCCCCcceeecC--CCCCEEEEEEcCCCCcEEEEEeCCCeEEEeeCCCCCcccCCCc
Q 014472 281 FNPFNEWILATGSTDKTVKLFDLRKISTALHTFDS--HKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPED 358 (424)
Q Consensus 281 ~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~--~~~~v~~~~~sp~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~ 358 (424)
|+|++. +|++|+.||+|++||++. ...+..+.. +...|++++|+|++. +|++|+.||.|++||+...
T Consensus 234 ~~p~~~-~l~s~s~d~~v~iwd~~~-~~~~~~~~~~~~~~~v~~~~~s~~g~-~l~~g~~d~~i~vwd~~~~-------- 302 (340)
T 1got_B 234 FFPNGN-AFATGSDDATCRLFDLRA-DQELMTYSHDNIICGITSVSFSKSGR-LLLAGYDDFNCNVWDALKA-------- 302 (340)
T ss_dssp ECTTSS-EEEEEETTSCEEEEETTT-TEEEEEECCTTCCSCEEEEEECTTSS-EEEEEETTSEEEEEETTTC--------
T ss_pred EcCCCC-EEEEEcCCCcEEEEECCC-CcEEEEEccCCcccceEEEEECCCCC-EEEEECCCCeEEEEEcccC--------
Confidence 999987 699999999999999997 555555542 345799999999996 7999999999999999764
Q ss_pred cCCCCCeeeEEEcCCCCCcceEEeCCCCCcEEEEEeCCCcEEEEe
Q 014472 359 AEDGPPELLFIHGGHTSKISDFSWNPCEDWVISSVAEDNILQIWQ 403 (424)
Q Consensus 359 ~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iw~ 403 (424)
..+..+.+|...|++++|+|++. +|+||+.|+.|+||+
T Consensus 303 ------~~~~~~~~h~~~v~~~~~s~dg~-~l~s~s~D~~i~iWd 340 (340)
T 1got_B 303 ------DRAGVLAGHDNRVSCLGVTDDGM-AVATGSWDSFLKIWN 340 (340)
T ss_dssp ------CEEEEEECCSSCEEEEEECTTSS-CEEEEETTSCEEEEC
T ss_pred ------cEeeEeecCCCcEEEEEEcCCCC-EEEEEcCCccEEecC
Confidence 45667789999999999999999 699999999999996
No 11
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=100.00 E-value=2.6e-39 Score=290.85 Aligned_cols=260 Identities=18% Similarity=0.275 Sum_probs=211.5
Q ss_pred EeccCCceeEEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCCeeeEEecCC-CCceEEEEeC
Q 014472 121 QINHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKF-KEGHLLSGSD 199 (424)
Q Consensus 121 ~~~h~~~v~~i~~~p~~~~~latg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~-~~~~l~s~~~ 199 (424)
..+|.+.|++++|+|+++ +||+|+.|++|+||++.. ........+.+|.+.|.+++|++. ...+|++|+.
T Consensus 5 ~~~h~~~V~~~~~s~~g~-~las~s~D~~v~iw~~~~--------~~~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~ 75 (297)
T 2pm7_B 5 ANAHNEMIHDAVMDYYGK-RMATCSSDKTIKIFEVEG--------ETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSY 75 (297)
T ss_dssp CCSCSSCEEEEEECTTSS-EEEEEETTSCEEEEEBCS--------SCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEET
T ss_pred ccCCcCceEEEEECCCCC-EEEEEeCCCEEEEEecCC--------CCcEEEEEEccccCCeEEEEecCCCcCCEEEEEcC
Confidence 347999999999999987 899999999999999975 223557789999999999999864 2348999999
Q ss_pred CCcEEEEeCCCCCCCCcccceeeeecCCcceeeEEeeCCC-CcEEEEEeCCCeEEEEECCCCCCCCCeeEecccCCCeeE
Q 014472 200 DAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRH-EYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNC 278 (424)
Q Consensus 200 dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~-~~~~~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~ 278 (424)
||+|++||+.++.. ..+..+..|...|.+++|+|+. ..+|++++.|+.|++||++..... ....+.+|...|++
T Consensus 76 D~~v~iWd~~~~~~----~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~-~~~~~~~h~~~v~~ 150 (297)
T 2pm7_B 76 DGKVMIWKEENGRW----SQIAVHAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTT-SPIIIDAHAIGVNS 150 (297)
T ss_dssp TTEEEEEEBSSSCB----CCCEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCB-CCEEEECCSSCEEE
T ss_pred CCEEEEEEcCCCce----EEEEEeecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCce-eeeeeecccCccce
Confidence 99999999986532 2344567799999999999972 246789999999999999876422 23556789999999
Q ss_pred EEecCCC------------CeEEEEEeCCCcEEEEECCCCCC---cceeecCCCCCEEEEEEcCCC--CcEEEEEeCCCe
Q 014472 279 LAFNPFN------------EWILATGSTDKTVKLFDLRKIST---ALHTFDSHKEEVFQVGWNPKN--ETILASCCLGRR 341 (424)
Q Consensus 279 i~~~~~~------------~~~l~~g~~dg~i~iwd~~~~~~---~~~~~~~~~~~v~~~~~sp~~--~~~l~s~~~dg~ 341 (424)
++|+|++ ..+|++|+.|++|++||++.... ....+.+|...|.+++|+|++ ..+|++++.|++
T Consensus 151 ~~~~p~~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v~~sp~~~~~~~las~s~D~~ 230 (297)
T 2pm7_B 151 ASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYMASVSQDRT 230 (297)
T ss_dssp EEECCCC------------CCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSC
T ss_pred EeecCCcccccccCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEecCCCCceEEEEECCCCCCceEEEEEECCCc
Confidence 9999973 23799999999999999987332 456788999999999999985 458999999999
Q ss_pred EEEeeCCCCCcccCCCccCCCCCeeeEEE--cCCCCCcceEEeCCCCCcEEEEEeCCCcEEEEecCC
Q 014472 342 LMVWDLSRIDEEQTPEDAEDGPPELLFIH--GGHTSKISDFSWNPCEDWVISSVAEDNILQIWQMAE 406 (424)
Q Consensus 342 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~--~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iw~~~~ 406 (424)
|+|||++..... .....+ .+|...|++++|+|+++ +|++++.|+.|+||+...
T Consensus 231 v~iWd~~~~~~~-----------~~~~~~~~~~~~~~v~~~~~s~~g~-~las~~~D~~v~lw~~~~ 285 (297)
T 2pm7_B 231 CIIWTQDNEQGP-----------WKKTLLKEEKFPDVLWRASWSLSGN-VLALSGGDNKVTLWKENL 285 (297)
T ss_dssp EEEEEESSTTSC-----------CEEEESSSSCCSSCEEEEEECSSSC-CEEEEETTSCEEEEEECT
T ss_pred EEEEEeCCCCCc-----------cceeeeecccCCCcEEEEEECCCCC-EEEEEcCCCcEEEEEECC
Confidence 999998763210 111122 46788899999999999 699999999999999863
No 12
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=3.5e-39 Score=300.24 Aligned_cols=262 Identities=21% Similarity=0.348 Sum_probs=214.3
Q ss_pred EeccCCceeEEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCCeeeEEecCCCCceEEEEeCC
Q 014472 121 QINHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDD 200 (424)
Q Consensus 121 ~~~h~~~v~~i~~~p~~~~~latg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~d 200 (424)
...|...|.+++|+|++. +||+|+.|+.|+||++....... ........+.+|.+.|.++.|+|++...|++|+.|
T Consensus 104 ~~~h~~~v~~~~~s~~g~-~las~~~d~~v~iw~~~~~~~~~---~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D 179 (380)
T 3iz6_a 104 IKLHCPWVMECAFAPNGQ-SVACGGLDSACSIFNLSSQADRD---GNMPVSRVLTGHKGYASSCQYVPDQETRLITGSGD 179 (380)
T ss_dssp EECCCTTCCCCEECTTSS-EEEECCSSSCCEEEECCCCSSCC---CSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECTT
T ss_pred EecCCCCEEEEEECCCCC-EEEEeeCCCcEEEEECCCCcccc---CCccceeeccCCCcceEEEEEecCCCCEEEEECCC
Confidence 446999999999999987 89999999999999997632211 12334456789999999999999877679999999
Q ss_pred CcEEEEeCCCCCCCCcccceeeeecCCcceeeEEeeCCCCcEEEEEeCCCeEEEEECCCCCCCCCeeEecccCCCeeEEE
Q 014472 201 AQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLA 280 (424)
Q Consensus 201 g~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~ 280 (424)
++|++||+.++.....+. .....+|...|.+++|++.+..+|++|+.|++|++||++... ..+..+.+|...|++++
T Consensus 180 ~~i~~wd~~~~~~~~~~~-~~~~~~h~~~v~~~~~~~~~~~~l~sgs~D~~v~~wd~~~~~--~~~~~~~~h~~~v~~v~ 256 (380)
T 3iz6_a 180 QTCVLWDVTTGQRISIFG-SEFPSGHTADVLSLSINSLNANMFISGSCDTTVRLWDLRITS--RAVRTYHGHEGDINSVK 256 (380)
T ss_dssp SCEEEECTTTCCEEEEEC-CCSSSSCCSCEEEEEECSSSCCEEEEEETTSCEEEEETTTTC--CCCEEECCCSSCCCEEE
T ss_pred CcEEEEEcCCCcEEEEee-cccCCCCccCeEEEEeecCCCCEEEEEECCCeEEEEECCCCC--cceEEECCcCCCeEEEE
Confidence 999999998774321110 011256899999999998666788899999999999998543 24677889999999999
Q ss_pred ecCCCCeEEEEEeCCCcEEEEECCCCCCcceeecCCC-------CCEEEEEEcCCCCcEEEEEeCCCeEEEeeCCCCCcc
Q 014472 281 FNPFNEWILATGSTDKTVKLFDLRKISTALHTFDSHK-------EEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEE 353 (424)
Q Consensus 281 ~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~-------~~v~~~~~sp~~~~~l~s~~~dg~i~iwd~~~~~~~ 353 (424)
|+|++. +|++|+.||+|++||+++ +.++..+..+. ..|++++|+|++. +|++|+.||.|++||+....
T Consensus 257 ~~p~~~-~l~s~s~D~~i~lwd~~~-~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~-~l~~g~~dg~i~vwd~~~~~-- 331 (380)
T 3iz6_a 257 FFPDGQ-RFGTGSDDGTCRLFDMRT-GHQLQVYNREPDRNDNELPIVTSVAFSISGR-LLFAGYSNGDCYVWDTLLAE-- 331 (380)
T ss_dssp ECTTSS-EEEEECSSSCEEEEETTT-TEEEEEECCCCSSSCCSSCSCSEEEECSSSS-EEEEECTTSCEEEEETTTCC--
T ss_pred EecCCC-eEEEEcCCCeEEEEECCC-CcEEEEecccccccccccCceEEEEECCCCC-EEEEEECCCCEEEEECCCCc--
Confidence 999998 699999999999999998 66666665433 3489999999996 79999999999999997642
Q ss_pred cCCCccCCCCCeeeEEE----cCCCCCcceEEeCCCCCcEEEEEeCCCcEEEEecCCC
Q 014472 354 QTPEDAEDGPPELLFIH----GGHTSKISDFSWNPCEDWVISSVAEDNILQIWQMAEN 407 (424)
Q Consensus 354 ~~~~~~~~~~~~~~~~~----~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iw~~~~~ 407 (424)
.+..+ .+|...|++++|+|++. +|+||+.|+.|+||++...
T Consensus 332 ------------~~~~~~~~~~~h~~~v~~l~~s~dg~-~l~sgs~D~~i~iW~~~~~ 376 (380)
T 3iz6_a 332 ------------MVLNLGTLQNSHEGRISCLGLSSDGS-ALCTGSWDKNLKIWAFSGH 376 (380)
T ss_dssp ------------EEEEECCSCSSCCCCCCEEEECSSSS-EEEEECTTSCEEEEECCSS
T ss_pred ------------eEEEEecccCCCCCceEEEEECCCCC-EEEEeeCCCCEEEEecCCC
Confidence 33333 68999999999999999 7999999999999999865
No 13
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=1.6e-38 Score=286.60 Aligned_cols=250 Identities=19% Similarity=0.262 Sum_probs=212.3
Q ss_pred EEeccCCceeEEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCCeeeEEecCCCCceEEEEeC
Q 014472 120 QQINHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSD 199 (424)
Q Consensus 120 ~~~~h~~~v~~i~~~p~~~~~latg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~ 199 (424)
....|...|.+++|+|++. +|++|+.|+.|++||+.+ ......+.+|...|.+++|+|++. +|++|+.
T Consensus 50 ~~~~~~~~v~~~~~~~~~~-~l~s~s~d~~i~vwd~~~----------~~~~~~~~~h~~~v~~~~~~~~~~-~l~sgs~ 117 (304)
T 2ynn_A 50 SIQVTETPVRAGKFIARKN-WIIVGSDDFRIRVFNYNT----------GEKVVDFEAHPDYIRSIAVHPTKP-YVLSGSD 117 (304)
T ss_dssp EEECCSSCEEEEEEEGGGT-EEEEEETTSEEEEEETTT----------CCEEEEEECCSSCEEEEEECSSSS-EEEEEET
T ss_pred EeeccCCcEEEEEEeCCCC-EEEEECCCCEEEEEECCC----------CcEEEEEeCCCCcEEEEEEcCCCC-EEEEECC
Confidence 3446889999999999886 899999999999999987 456778899999999999999887 7999999
Q ss_pred CCcEEEEeCCCCCCCCcccceeeeecCCcceeeEEeeCCCCcEEEEEeCCCeEEEEECCCCCCCCCeeEecccCCCeeEE
Q 014472 200 DAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCL 279 (424)
Q Consensus 200 dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~i 279 (424)
||+|++||++++. .....+.+|...|.+++|+|.+..+|++|+.|++|++||++.... .......|...+..+
T Consensus 118 D~~v~lWd~~~~~-----~~~~~~~~h~~~v~~v~~~p~~~~~l~sgs~D~~v~iwd~~~~~~--~~~~~~~~~~~v~~~ 190 (304)
T 2ynn_A 118 DLTVKLWNWENNW-----ALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTP--NFTLTTGQERGVNYV 190 (304)
T ss_dssp TSCEEEEEGGGTT-----EEEEEECCCCSCEEEEEECTTCTTEEEEEETTSEEEEEETTCSSC--SEEEECCCTTCEEEE
T ss_pred CCeEEEEECCCCc-----chhhhhcccCCcEEEEEECCCCCCEEEEEeCCCeEEEEECCCCCc--cceeccCCcCcEEEE
Confidence 9999999997542 234567789999999999997666888999999999999987653 223334567889999
Q ss_pred EecC--CCCeEEEEEeCCCcEEEEECCCCCCcceeecCCCCCEEEEEEcCCCCcEEEEEeCCCeEEEeeCCCCCcccCCC
Q 014472 280 AFNP--FNEWILATGSTDKTVKLFDLRKISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPE 357 (424)
Q Consensus 280 ~~~~--~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~ 357 (424)
+|+| ++. +|++|+.|++|++||+++ +.++..+.+|...|.+++|+|+++ +|++|+.||.|++||+.+.
T Consensus 191 ~~~~~~~~~-~l~s~s~D~~i~iWd~~~-~~~~~~~~~h~~~v~~~~~~p~~~-~l~s~s~Dg~i~iWd~~~~------- 260 (304)
T 2ynn_A 191 DYYPLPDKP-YMITASDDLTIKIWDYQT-KSCVATLEGHMSNVSFAVFHPTLP-IIISGSEDGTLKIWNSSTY------- 260 (304)
T ss_dssp EECCSTTCC-EEEEEETTSEEEEEETTT-TEEEEEEECCSSCEEEEEECSSSS-EEEEEETTSCEEEEETTTC-------
T ss_pred EEEEcCCCC-EEEEEcCCCeEEEEeCCC-CccceeeCCCCCCEEEEEECCCCC-EEEEEcCCCeEEEEECCCC-------
Confidence 9987 444 799999999999999998 788999999999999999999996 7999999999999999875
Q ss_pred ccCCCCCeeeEEEcCCCCCcceEEeCCCCCc-EEEEEeCCCcEEEEecCC
Q 014472 358 DAEDGPPELLFIHGGHTSKISDFSWNPCEDW-VISSVAEDNILQIWQMAE 406 (424)
Q Consensus 358 ~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~-~l~s~~~d~~i~iw~~~~ 406 (424)
+++..+..|...+++++|+|++.. ++++|+.| .+.+|++..
T Consensus 261 -------~~~~~~~~~~~~~~~~~~~~~~~~~~~asg~~~-g~~~~~~~~ 302 (304)
T 2ynn_A 261 -------KVEKTLNVGLERSWCIATHPTGRKNYIASGFDN-GFTVLSLGN 302 (304)
T ss_dssp -------CEEEEECCSSSSEEEEEECTTCGGGCEEEEETT-EEEEEECC-
T ss_pred -------ceeeeccCCCccEEEEEECCCCCceEEEEecCC-ceEEEEecc
Confidence 567778889899999999998853 37776654 588888765
No 14
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=3.7e-38 Score=290.41 Aligned_cols=249 Identities=22% Similarity=0.334 Sum_probs=212.8
Q ss_pred eccCCceeEEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCCeeeEEecCCCCceEEEEeCCC
Q 014472 122 INHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDDA 201 (424)
Q Consensus 122 ~~h~~~v~~i~~~p~~~~~latg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg 201 (424)
..|...|.+++|+|++. +||+|+.|+.+++|++...... ........+.+|...|.+++|+|++. .|++++.||
T Consensus 103 ~~~~~~v~~~~~sp~g~-~lasg~~d~~i~v~~~~~~~~~----~~~~~~~~~~~h~~~v~~~~~~~~~~-~l~t~s~D~ 176 (354)
T 2pbi_B 103 TMPCTWVMACAYAPSGC-AIACGGLDNKCSVYPLTFDKNE----NMAAKKKSVAMHTNYLSACSFTNSDM-QILTASGDG 176 (354)
T ss_dssp ECSSSCCCEEEECTTSS-EEEEESTTSEEEEEECCCCTTC----CSGGGCEEEEECSSCEEEEEECSSSS-EEEEEETTS
T ss_pred ecCCCCEEEEEECCCCC-EEEEeeCCCCEEEEEEeccccc----cccccceeeeccCCcEEEEEEeCCCC-EEEEEeCCC
Confidence 35788999999999987 8999999999999998753221 11244567888999999999999887 799999999
Q ss_pred cEEEEeCCCCCCCCcccceeeeecCCcceeeEEeeCCC-CcEEEEEeCCCeEEEEECCCCCCCCCeeEecccCCCeeEEE
Q 014472 202 QICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRH-EYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLA 280 (424)
Q Consensus 202 ~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~-~~~~~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~ 280 (424)
+|++||++++ ..+..+.+|...|.+++|+|.. ..+|++|+.||.|++||++++.. +..+..|...|++++
T Consensus 177 ~v~lwd~~~~------~~~~~~~~h~~~v~~~~~~~~~~g~~l~sgs~Dg~v~~wd~~~~~~---~~~~~~h~~~v~~v~ 247 (354)
T 2pbi_B 177 TCALWDVESG------QLLQSFHGHGADVLCLDLAPSETGNTFVSGGCDKKAMVWDMRSGQC---VQAFETHESDVNSVR 247 (354)
T ss_dssp EEEEEETTTC------CEEEEEECCSSCEEEEEECCCSSCCEEEEEETTSCEEEEETTTCCE---EEEECCCSSCEEEEE
T ss_pred cEEEEeCCCC------eEEEEEcCCCCCeEEEEEEeCCCCCEEEEEeCCCeEEEEECCCCcE---EEEecCCCCCeEEEE
Confidence 9999999876 3566788899999999998853 35778999999999999998664 777889999999999
Q ss_pred ecCCCCeEEEEEeCCCcEEEEECCCCCCcceeecC--CCCCEEEEEEcCCCCcEEEEEeCCCeEEEeeCCCCCcccCCCc
Q 014472 281 FNPFNEWILATGSTDKTVKLFDLRKISTALHTFDS--HKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPED 358 (424)
Q Consensus 281 ~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~--~~~~v~~~~~sp~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~ 358 (424)
|+|++. +|++|+.|++|++||++. ...+..+.. +...+.+++|+|++. +|++++.|+.|++||+..+
T Consensus 248 ~~p~~~-~l~s~s~D~~v~lwd~~~-~~~~~~~~~~~~~~~~~~~~~s~~g~-~l~~g~~d~~i~vwd~~~~-------- 316 (354)
T 2pbi_B 248 YYPSGD-AFASGSDDATCRLYDLRA-DREVAIYSKESIIFGASSVDFSLSGR-LLFAGYNDYTINVWDVLKG-------- 316 (354)
T ss_dssp ECTTSS-EEEEEETTSCEEEEETTT-TEEEEEECCTTCCSCEEEEEECTTSS-EEEEEETTSCEEEEETTTC--------
T ss_pred EeCCCC-EEEEEeCCCeEEEEECCC-CcEEEEEcCCCcccceeEEEEeCCCC-EEEEEECCCcEEEEECCCC--------
Confidence 999987 699999999999999997 455555543 345789999999996 7999999999999999764
Q ss_pred cCCCCCeeeEEEcCCCCCcceEEeCCCCCcEEEEEeCCCcEEEEe
Q 014472 359 AEDGPPELLFIHGGHTSKISDFSWNPCEDWVISSVAEDNILQIWQ 403 (424)
Q Consensus 359 ~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iw~ 403 (424)
..+..+.+|...|++++|+|+++ +|++|+.|+.|+||+
T Consensus 317 ------~~~~~l~~h~~~v~~l~~spdg~-~l~sgs~D~~v~vW~ 354 (354)
T 2pbi_B 317 ------SRVSILFGHENRVSTLRVSPDGT-AFCSGSWDHTLRVWA 354 (354)
T ss_dssp ------SEEEEECCCSSCEEEEEECTTSS-CEEEEETTSEEEEEC
T ss_pred ------ceEEEEECCCCcEEEEEECCCCC-EEEEEcCCCCEEecC
Confidence 44667789999999999999999 699999999999996
No 15
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=1.1e-38 Score=292.39 Aligned_cols=251 Identities=14% Similarity=0.237 Sum_probs=217.2
Q ss_pred EeccCCceeEEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCCeeeEEecCCCCceEEEEeCC
Q 014472 121 QINHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDD 200 (424)
Q Consensus 121 ~~~h~~~v~~i~~~p~~~~~latg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~d 200 (424)
..+|.+.|++++|+|++. +||+|+.||.|+|||+.. ......+..|...|.+++|+|++. +|++|+.|
T Consensus 51 l~gH~~~v~~~~~s~d~~-~l~s~s~Dg~v~iWd~~~----------~~~~~~~~~~~~~v~~~~~s~~~~-~l~s~~~d 118 (340)
T 1got_B 51 LRGHLAKIYAMHWGTDSR-LLLSASQDGKLIIWDSYT----------TNKVHAIPLRSSWVMTCAYAPSGN-YVACGGLD 118 (340)
T ss_dssp ECCCSSCEEEEEECTTSS-EEEEEETTTEEEEEETTT----------CCEEEEEECSSSCEEEEEECTTSS-EEEEEETT
T ss_pred ecCCCCceEEEEECCCCC-EEEEEeCCCcEEEEECCC----------CCcceEeecCCccEEEEEECCCCC-EEEEEeCC
Confidence 457999999999999886 899999999999999877 455677888999999999999887 89999999
Q ss_pred CcEEEEeCCCCCCCCcccceeeeecCCcceeeEEeeCCCCcEEEEEeCCCeEEEEECCCCCCCCCeeEecccCCCeeEEE
Q 014472 201 AQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLA 280 (424)
Q Consensus 201 g~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~ 280 (424)
+.|++|++.+... .......+.+|.+.|.++.|++++. +++++.|+.|++||++++.. +..+.+|...|.+++
T Consensus 119 ~~v~iw~~~~~~~--~~~~~~~~~~h~~~v~~~~~~~~~~--l~s~s~d~~i~~wd~~~~~~---~~~~~~h~~~v~~~~ 191 (340)
T 1got_B 119 NICSIYNLKTREG--NVRVSRELAGHTGYLSCCRFLDDNQ--IVTSSGDTTCALWDIETGQQ---TTTFTGHTGDVMSLS 191 (340)
T ss_dssp CEEEEEETTTCSB--SCEEEEEEECCSSCEEEEEEEETTE--EEEEETTSCEEEEETTTTEE---EEEECCCSSCEEEEE
T ss_pred CeEEEEECccCCC--cceeEEEecCCCccEEEEEECCCCc--EEEEECCCcEEEEECCCCcE---EEEEcCCCCceEEEE
Confidence 9999999976532 2234556778999999999998864 66999999999999998653 677889999999999
Q ss_pred ecCCCCeEEEEEeCCCcEEEEECCCCCCcceeecCCCCCEEEEEEcCCCCcEEEEEeCCCeEEEeeCCCCCcccCCCccC
Q 014472 281 FNPFNEWILATGSTDKTVKLFDLRKISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPEDAE 360 (424)
Q Consensus 281 ~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~ 360 (424)
|+|++. +|++|+.|+.|++||+++ +.++..+.+|...|++++|+|++. +|++++.||.|++||++...
T Consensus 192 ~~~~~~-~l~sg~~d~~v~~wd~~~-~~~~~~~~~h~~~v~~v~~~p~~~-~l~s~s~d~~v~iwd~~~~~--------- 259 (340)
T 1got_B 192 LAPDTR-LFVSGACDASAKLWDVRE-GMCRQTFTGHESDINAICFFPNGN-AFATGSDDATCRLFDLRADQ--------- 259 (340)
T ss_dssp ECTTSS-EEEEEETTSCEEEEETTT-CSEEEEECCCSSCEEEEEECTTSS-EEEEEETTSCEEEEETTTTE---------
T ss_pred ECCCCC-EEEEEeCCCcEEEEECCC-CeeEEEEcCCcCCEEEEEEcCCCC-EEEEEcCCCcEEEEECCCCc---------
Confidence 999887 799999999999999998 778889999999999999999995 79999999999999998742
Q ss_pred CCCCeeeEEE--cCCCCCcceEEeCCCCCcEEEEEeCCCcEEEEecCCCC
Q 014472 361 DGPPELLFIH--GGHTSKISDFSWNPCEDWVISSVAEDNILQIWQMAENI 408 (424)
Q Consensus 361 ~~~~~~~~~~--~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~ 408 (424)
.+..+ ..+...|++++|+|+++ +|++|+.|+.|++||+.++.
T Consensus 260 -----~~~~~~~~~~~~~v~~~~~s~~g~-~l~~g~~d~~i~vwd~~~~~ 303 (340)
T 1got_B 260 -----ELMTYSHDNIICGITSVSFSKSGR-LLLAGYDDFNCNVWDALKAD 303 (340)
T ss_dssp -----EEEEECCTTCCSCEEEEEECTTSS-EEEEEETTSEEEEEETTTCC
T ss_pred -----EEEEEccCCcccceEEEEECCCCC-EEEEECCCCeEEEEEcccCc
Confidence 23332 33445799999999999 79999999999999987653
No 16
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=1.6e-39 Score=297.67 Aligned_cols=262 Identities=17% Similarity=0.215 Sum_probs=207.1
Q ss_pred ccCCceeEEEecCCCCcEEEEEecCCeEEEEeCCCCCCC-CCCCCCCCCcEEEecCCCCeeeEEecCCCCceEEEEeCCC
Q 014472 123 NHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSK-PPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDDA 201 (424)
Q Consensus 123 ~h~~~v~~i~~~p~~~~~latg~~dg~v~iwd~~~~~~~-~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg 201 (424)
.|...|.+++|+|+|. +|++++ |+++++||.....-. ...............|...|.+++|+|++ .|++|+.||
T Consensus 28 ~~~~~v~~~~fs~dG~-~l~~~s-d~~~r~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d~--~l~~~s~dg 103 (344)
T 4gqb_B 28 CMERQLEAARYRSDGA-LLLGAS-SLSGRCWAGSLWLFKDPCAAPNEGFCSAGVQTEAGVADLTWVGER--GILVASDSG 103 (344)
T ss_dssp SCCSEEEEEEECTTSC-EEEEEE-CCSSSCCCEEEEEESSGGGTTCGGGCSEEEEESSCEEEEEEETTT--EEEEEETTS
T ss_pred cccCCEEEEEECCCCC-EEEEEe-CCceEEeeceeeeeccccccCCcceeeeeeccCCCEEEEEEeCCC--eEEEEECCC
Confidence 4677899999999997 777766 677777763210000 00000011122334467789999999974 589999999
Q ss_pred cEEEEeCCCCCCCCcccceeeeecCCcceeeEEeeCCCCcEEEEEeCCCeEEEEECCCCCCCCCeeEecccCCCeeEEEe
Q 014472 202 QICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAF 281 (424)
Q Consensus 202 ~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~ 281 (424)
+|+|||+.+++.... ......+|...|++++|+|++. +|++|+.|++|++||+++++. +..+.+|...|++++|
T Consensus 104 ~v~lWd~~~~~~~~~--~~~~~~~H~~~V~~v~~spdg~-~l~sgs~d~~i~iwd~~~~~~---~~~~~~h~~~V~~~~~ 177 (344)
T 4gqb_B 104 AVELWELDENETLIV--SKFCKYEHDDIVSTVSVLSSGT-QAVSGSKDICIKVWDLAQQVV---LSSYRAHAAQVTCVAA 177 (344)
T ss_dssp EEEEEEECTTSSCEE--EEEEEECCSSCEEEEEECTTSS-EEEEEETTSCEEEEETTTTEE---EEEECCCSSCEEEEEE
T ss_pred EEEEEeccCCCceeE--eeccccCCCCCEEEEEECCCCC-EEEEEeCCCeEEEEECCCCcE---EEEEcCcCCceEEEEe
Confidence 999999988754321 1233557999999999999987 567999999999999998664 7888899999999999
Q ss_pred cCCCCeEEEEEeCCCcEEEEECCCCCCcceeec--CCCCCEEEEEEcCCCCcEEEEEeCCCeEEEeeCCCCCcccCCCcc
Q 014472 282 NPFNEWILATGSTDKTVKLFDLRKISTALHTFD--SHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPEDA 359 (424)
Q Consensus 282 ~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~--~~~~~v~~~~~sp~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~ 359 (424)
+|++..+|++|+.|++|++||+++ ++++..+. .|...+.+++|+|++..+|++|+.||.|+|||++++
T Consensus 178 ~~~~~~~l~s~s~D~~v~iwd~~~-~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~~~--------- 247 (344)
T 4gqb_B 178 SPHKDSVFLSCSEDNRILLWDTRC-PKPASQIGCSAPGYLPTSLAWHPQQSEVFVFGDENGTVSLVDTKST--------- 247 (344)
T ss_dssp CSSCTTEEEEEETTSCEEEEETTS-SSCEEECC----CCCEEEEEECSSCTTEEEEEETTSEEEEEESCC----------
T ss_pred cCCCCCceeeeccccccccccccc-cceeeeeecceeeccceeeeecCCCCcceEEeccCCcEEEEECCCC---------
Confidence 999987899999999999999998 56666654 456689999999987779999999999999999875
Q ss_pred CCCCCeeeEEEcCCCCCcceEEeCCCCCcEEEEEeCCCcEEEEecCCCCC
Q 014472 360 EDGPPELLFIHGGHTSKISDFSWNPCEDWVISSVAEDNILQIWQMAENIY 409 (424)
Q Consensus 360 ~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~ 409 (424)
+++..+.+|...|++++|+|++..+|++++.|+.|+|||+.++.+
T Consensus 248 -----~~~~~~~~h~~~v~~v~fsp~g~~~lasgs~D~~i~vwd~~~~~~ 292 (344)
T 4gqb_B 248 -----SCVLSSAVHSQCVTGLVFSPHSVPFLASLSEDCSLAVLDSSLSEL 292 (344)
T ss_dssp ------CCEEEECCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTCCEE
T ss_pred -----cEEEEEcCCCCCEEEEEEccCCCeEEEEEeCCCeEEEEECCCCcE
Confidence 456778899999999999999865799999999999999988743
No 17
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=1.1e-38 Score=289.73 Aligned_cols=272 Identities=18% Similarity=0.287 Sum_probs=217.3
Q ss_pred EEEEEEe-ccCCceeEEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCCeeeEEecCCCCceE
Q 014472 116 VQIIQQI-NHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHL 194 (424)
Q Consensus 116 ~~~~~~~-~h~~~v~~i~~~p~~~~~latg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l 194 (424)
+.+...+ +|.+.|++++|+|+++.+|++|+.|++|++|++..... ....+...+.+|...|.+++|+|++. +|
T Consensus 7 ~~l~~~l~gH~~~V~~l~~~~~~~~~l~s~s~D~~v~~W~~~~~~~-----~~~~~~~~~~~h~~~v~~~~~s~dg~-~l 80 (319)
T 3frx_A 7 LVLRGTLEGHNGWVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQ-----KFGVPVRSFKGHSHIVQDCTLTADGA-YA 80 (319)
T ss_dssp EEEEEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEEEEEETT-----EEEEEEEEEECCSSCEEEEEECTTSS-EE
T ss_pred EEEEEEEccccceEEEEEccCCCccEEEEecCCccEEEecCCCCCc-----cccccceEEeCCcccEEEEEECCCCC-EE
Confidence 4444444 69999999999998767999999999999999864111 01234567889999999999999887 79
Q ss_pred EEEeCCCcEEEEeCCCCCCCCcccceeeeecCCcceeeEEeeCCCCcEEEEEeCCCeEEEEECCCCCCCCCeeEecccCC
Q 014472 195 LSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQS 274 (424)
Q Consensus 195 ~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~ 274 (424)
++|+.|++|++||+.++ +.+..+.+|...|.+++|+|++. ++++|+.|++|++||++.. .+..+.+|..
T Consensus 81 ~s~s~D~~v~~wd~~~~------~~~~~~~~h~~~v~~~~~~~~~~-~l~s~s~D~~i~vwd~~~~----~~~~~~~h~~ 149 (319)
T 3frx_A 81 LSASWDKTLRLWDVATG------ETYQRFVGHKSDVMSVDIDKKAS-MIISGSRDKTIKVWTIKGQ----CLATLLGHND 149 (319)
T ss_dssp EEEETTSEEEEEETTTT------EEEEEEECCSSCEEEEEECTTSC-EEEEEETTSCEEEEETTSC----EEEEECCCSS
T ss_pred EEEeCCCEEEEEECCCC------CeeEEEccCCCcEEEEEEcCCCC-EEEEEeCCCeEEEEECCCC----eEEEEeccCC
Confidence 99999999999999876 35667889999999999999986 5679999999999999743 3677788999
Q ss_pred CeeEEEecCCCC-----eEEEEEeCCCcEEEEECCCCCCcceeecCCCCCEEEEEEcCCCCcEEEEEeCCCeEEEeeCCC
Q 014472 275 EVNCLAFNPFNE-----WILATGSTDKTVKLFDLRKISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSR 349 (424)
Q Consensus 275 ~v~~i~~~~~~~-----~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~s~~~dg~i~iwd~~~ 349 (424)
.|.+++|.|... .+|++|+.|+.|++||++. ......+.+|...|.+++|+|++. +|++++.||.|+|||+..
T Consensus 150 ~v~~~~~~~~~~~~~~~~~l~s~~~d~~i~~wd~~~-~~~~~~~~~h~~~v~~~~~sp~g~-~l~s~~~dg~i~iwd~~~ 227 (319)
T 3frx_A 150 WVSQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQ-FQIEADFIGHNSNINTLTASPDGT-LIASAGKDGEIMLWNLAA 227 (319)
T ss_dssp CEEEEEECCC------CCEEEEEETTSCEEEEETTT-TEEEEEECCCCSCEEEEEECTTSS-EEEEEETTCEEEEEETTT
T ss_pred cEEEEEEccCCCCCCCccEEEEEeCCCEEEEEECCc-chhheeecCCCCcEEEEEEcCCCC-EEEEEeCCCeEEEEECCC
Confidence 999999998532 3699999999999999998 677788899999999999999996 799999999999999987
Q ss_pred CCcccCCCccC---------CC-----------------CCeeeEEEc--------CCCCCcceEEeCCCCCcEEEEEeC
Q 014472 350 IDEEQTPEDAE---------DG-----------------PPELLFIHG--------GHTSKISDFSWNPCEDWVISSVAE 395 (424)
Q Consensus 350 ~~~~~~~~~~~---------~~-----------------~~~~~~~~~--------~h~~~v~~~~~~~~~~~~l~s~~~ 395 (424)
........... ++ +..++..+. .|...+.+++|+|+|+ +|++|+.
T Consensus 228 ~~~~~~~~~~~~v~~~~~sp~~~~la~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~-~l~sg~~ 306 (319)
T 3frx_A 228 KKAMYTLSAQDEVFSLAFSPNRYWLAAATATGIKVFSLDPQYLVDDLRPEFAGYSKAAEPHAVSLAWSADGQ-TLFAGYT 306 (319)
T ss_dssp TEEEEEEECCSCEEEEEECSSSSEEEEEETTEEEEEEETTEEEEEEECCCCTTCCGGGCCCEEEEEECTTSS-EEEEEET
T ss_pred CcEEEEecCCCcEEEEEEcCCCCEEEEEcCCCcEEEEeCcCeeeeccCccccccccCcCcceeEEEECCCCC-EEEEeec
Confidence 65332111000 00 001111111 2345688999999999 6899999
Q ss_pred CCcEEEEecCCC
Q 014472 396 DNILQIWQMAEN 407 (424)
Q Consensus 396 d~~i~iw~~~~~ 407 (424)
||.|+||++.++
T Consensus 307 Dg~i~vWd~~t~ 318 (319)
T 3frx_A 307 DNVIRVWQVMTA 318 (319)
T ss_dssp TSCEEEEEEEEC
T ss_pred CceEEEEEEeec
Confidence 999999998753
No 18
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=5.6e-39 Score=294.93 Aligned_cols=274 Identities=22% Similarity=0.401 Sum_probs=219.2
Q ss_pred EEEEEEe-ccCC-ceeEEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcE-EEecCCCCeeeEEecCCCCc
Q 014472 116 VQIIQQI-NHDG-EVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDL-RLRGHSTEGYGLSWSKFKEG 192 (424)
Q Consensus 116 ~~~~~~~-~h~~-~v~~i~~~p~~~~~latg~~dg~v~iwd~~~~~~~~~~~~~~~~~~-~~~~h~~~v~~l~~~~~~~~ 192 (424)
++++..+ +|.+ .|.+++|+|++. +||+|+.|+.|+||++.. ....... ...+|...|.+++|+|++.
T Consensus 5 ~~~~~~~~~h~~~~v~~l~~sp~g~-~las~~~D~~i~iw~~~~--------~~~~~~~~~~~~h~~~v~~~~~sp~g~- 74 (345)
T 3fm0_A 5 LVLLGRVPAHPDSRCWFLAWNPAGT-LLASCGGDRRIRIWGTEG--------DSWICKSVLSEGHQRTVRKVAWSPCGN- 74 (345)
T ss_dssp EEEEEEECCSTTSCEEEEEECTTSS-CEEEEETTSCEEEEEEET--------TEEEEEEEECSSCSSCEEEEEECTTSS-
T ss_pred EEEeeeecCCCCCcEEEEEECCCCC-EEEEEcCCCeEEEEEcCC--------CcceeeeeeccccCCcEEEEEECCCCC-
Confidence 4445444 6887 999999999987 899999999999999876 1111112 2357999999999999887
Q ss_pred eEEEEeCCCcEEEEeCCCCCCCCcccceeeeecCCcceeeEEeeCCCCcEEEEEeCCCeEEEEECCCCCCCCCeeEeccc
Q 014472 193 HLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAH 272 (424)
Q Consensus 193 ~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~~s~~~dg~i~i~d~~~~~~~~~~~~~~~~ 272 (424)
+|++|+.|+.|++|++.... ...+..+.+|...|.+++|+|++. +|++|+.|++|++||++.......+..+..|
T Consensus 75 ~l~s~s~D~~v~iw~~~~~~----~~~~~~~~~h~~~v~~v~~sp~~~-~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~h 149 (345)
T 3fm0_A 75 YLASASFDATTCIWKKNQDD----FECVTTLEGHENEVKSVAWAPSGN-LLATCSRDKSVWVWEVDEEDEYECVSVLNSH 149 (345)
T ss_dssp EEEEEETTSCEEEEEECCC-----EEEEEEECCCSSCEEEEEECTTSS-EEEEEETTSCEEEEEECTTSCEEEEEEECCC
T ss_pred EEEEEECCCcEEEEEccCCC----eEEEEEccCCCCCceEEEEeCCCC-EEEEEECCCeEEEEECCCCCCeEEEEEecCc
Confidence 89999999999999987542 234567788999999999999986 6679999999999999876543445677889
Q ss_pred CCCeeEEEecCCCCeEEEEEeCCCcEEEEECCCCC-CcceeecCCCCCEEEEEEcCCCCcEEEEEeCCCeEEEeeCCCCC
Q 014472 273 QSEVNCLAFNPFNEWILATGSTDKTVKLFDLRKIS-TALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRID 351 (424)
Q Consensus 273 ~~~v~~i~~~~~~~~~l~~g~~dg~i~iwd~~~~~-~~~~~~~~~~~~v~~~~~sp~~~~~l~s~~~dg~i~iwd~~~~~ 351 (424)
...|.+++|+|++. +|++|+.|+.|++||++... .+...+.+|...|++++|+|++. +|++++.|++|+||+.....
T Consensus 150 ~~~v~~~~~~p~~~-~l~s~s~d~~i~~w~~~~~~~~~~~~~~~h~~~v~~l~~sp~g~-~l~s~s~D~~v~iW~~~~~~ 227 (345)
T 3fm0_A 150 TQDVKHVVWHPSQE-LLASASYDDTVKLYREEEDDWVCCATLEGHESTVWSLAFDPSGQ-RLASCSDDRTVRIWRQYLPG 227 (345)
T ss_dssp CSCEEEEEECSSSS-CEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECTTSS-EEEEEETTSCEEEEEEECTT
T ss_pred CCCeEEEEECCCCC-EEEEEeCCCcEEEEEecCCCEEEEEEecCCCCceEEEEECCCCC-EEEEEeCCCeEEEeccccCC
Confidence 99999999999998 69999999999999998632 24578889999999999999996 79999999999999975443
Q ss_pred cccCCCcc-CCCCCeeeEEEcC-CCCCcceEEeCCCCCcEEEEEeCCCcEEEEecCCC
Q 014472 352 EEQTPEDA-EDGPPELLFIHGG-HTSKISDFSWNPCEDWVISSVAEDNILQIWQMAEN 407 (424)
Q Consensus 352 ~~~~~~~~-~~~~~~~~~~~~~-h~~~v~~~~~~~~~~~~l~s~~~d~~i~iw~~~~~ 407 (424)
........ ......++..+.+ |...|++++|+|++. .|++++.|+.|++|+...+
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~-~l~s~~~d~~i~vw~~~~~ 284 (345)
T 3fm0_A 228 NEQGVACSGSDPSWKCICTLSGFHSRTIYDIAWCQLTG-ALATACGDDAIRVFQEDPN 284 (345)
T ss_dssp CTTCCCCC---CEEEEEEEECSSCSSCEEEEEECTTTC-CEEEEETTSCEEEEEECTT
T ss_pred CCccceeeccCCccceeEEecCCCCCcEEEEEEecCCC-EEEEEeCCCeEEEEEeCCC
Confidence 22221110 0111234445555 888999999999999 6999999999999998765
No 19
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=7e-39 Score=298.24 Aligned_cols=258 Identities=16% Similarity=0.276 Sum_probs=218.1
Q ss_pred EEeccCCceeEEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCCeeeEEecCCCCceEEEEeC
Q 014472 120 QQINHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSD 199 (424)
Q Consensus 120 ~~~~h~~~v~~i~~~p~~~~~latg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~ 199 (424)
...+|.+.|++++|+|++. +||+|+.||+|+|||... ......+..|...|.+++|+|++. +|++|+.
T Consensus 61 ~l~gH~~~V~~~~~sp~~~-~l~s~s~D~~v~iWd~~~----------~~~~~~~~~h~~~v~~~~~s~~g~-~las~~~ 128 (380)
T 3iz6_a 61 TLQGHSGKVYSLDWTPEKN-WIVSASQDGRLIVWNALT----------SQKTHAIKLHCPWVMECAFAPNGQ-SVACGGL 128 (380)
T ss_dssp EECCCSSCEEEEEECTTSS-CEEEEETTSEEEEEETTT----------TEEEEEEECCCTTCCCCEECTTSS-EEEECCS
T ss_pred cccccccEEEEEEEcCCCC-EEEEEeCCCeEEEEECCC----------CccceEEecCCCCEEEEEECCCCC-EEEEeeC
Confidence 3457999999999999886 899999999999999877 455678889999999999999987 7999999
Q ss_pred CCcEEEEeCCCCCCC-CcccceeeeecCCcceeeEEeeCCCCcEEEEEeCCCeEEEEECCCCCCCCCeeEe-----cccC
Q 014472 200 DAQICLWDINAAPKN-KSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSV-----VAHQ 273 (424)
Q Consensus 200 dg~i~vwd~~~~~~~-~~~~~~~~~~~~~~~v~~i~~~~~~~~~~~s~~~dg~i~i~d~~~~~~~~~~~~~-----~~~~ 273 (424)
|+.|++|++...... ........+.+|.+.|.++.|+|++...|++|+.|++|++||++++.. +..+ .+|.
T Consensus 129 d~~v~iw~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~---~~~~~~~~~~~h~ 205 (380)
T 3iz6_a 129 DSACSIFNLSSQADRDGNMPVSRVLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQR---ISIFGSEFPSGHT 205 (380)
T ss_dssp SSCCEEEECCCCSSCCCSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCCE---EEEECCCSSSSCC
T ss_pred CCcEEEEECCCCccccCCccceeeccCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCCcE---EEEeecccCCCCc
Confidence 999999999764321 222344567789999999999998777778999999999999998764 4433 5688
Q ss_pred CCeeEEEecCCCCeEEEEEeCCCcEEEEECCCCCCcceeecCCCCCEEEEEEcCCCCcEEEEEeCCCeEEEeeCCCCCcc
Q 014472 274 SEVNCLAFNPFNEWILATGSTDKTVKLFDLRKISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEE 353 (424)
Q Consensus 274 ~~v~~i~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~s~~~dg~i~iwd~~~~~~~ 353 (424)
..|.+++|++.+..+|++|+.|+.|++||++....++..+.+|...|.+++|+|++. +|++++.||+|++||++++.
T Consensus 206 ~~v~~~~~~~~~~~~l~sgs~D~~v~~wd~~~~~~~~~~~~~h~~~v~~v~~~p~~~-~l~s~s~D~~i~lwd~~~~~-- 282 (380)
T 3iz6_a 206 ADVLSLSINSLNANMFISGSCDTTVRLWDLRITSRAVRTYHGHEGDINSVKFFPDGQ-RFGTGSDDGTCRLFDMRTGH-- 282 (380)
T ss_dssp SCEEEEEECSSSCCEEEEEETTSCEEEEETTTTCCCCEEECCCSSCCCEEEECTTSS-EEEEECSSSCEEEEETTTTE--
T ss_pred cCeEEEEeecCCCCEEEEEECCCeEEEEECCCCCcceEEECCcCCCeEEEEEecCCC-eEEEEcCCCeEEEEECCCCc--
Confidence 999999998855558999999999999999976788899999999999999999996 79999999999999998753
Q ss_pred cCCCccCCCCCeeeEEEcCC-------CCCcceEEeCCCCCcEEEEEeCCCcEEEEecCCCC
Q 014472 354 QTPEDAEDGPPELLFIHGGH-------TSKISDFSWNPCEDWVISSVAEDNILQIWQMAENI 408 (424)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~~h-------~~~v~~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~ 408 (424)
.+..+..+ ...|++++|+|+++ +|++|+.||.|++||+..+.
T Consensus 283 ------------~~~~~~~~~~~~~~~~~~v~~~~~s~~g~-~l~~g~~dg~i~vwd~~~~~ 331 (380)
T 3iz6_a 283 ------------QLQVYNREPDRNDNELPIVTSVAFSISGR-LLFAGYSNGDCYVWDTLLAE 331 (380)
T ss_dssp ------------EEEEECCCCSSSCCSSCSCSEEEECSSSS-EEEEECTTSCEEEEETTTCC
T ss_pred ------------EEEEecccccccccccCceEEEEECCCCC-EEEEEECCCCEEEEECCCCc
Confidence 23333322 23589999999999 79999999999999987653
No 20
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=4.9e-39 Score=296.51 Aligned_cols=258 Identities=19% Similarity=0.245 Sum_probs=207.8
Q ss_pred eccCCceeEEEecCCCCcEEEEEec------CCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCCeeeEEecCCCCceEE
Q 014472 122 INHDGEVNRARYMPQNPFLIATKTV------SAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLL 195 (424)
Q Consensus 122 ~~h~~~v~~i~~~p~~~~~latg~~------dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~ 195 (424)
..|.+.|++++|+|+|. +||+|+. |+.|++|+...... .........+|...|.+++|+|++. ++
T Consensus 39 ~~H~~~V~~v~fSpDG~-~las~s~d~~~~wd~~v~~~~~~~~~~------~~~~~~~~~~~~~~V~~~~~s~d~~--~l 109 (357)
T 4g56_B 39 ACMEVQIGAVRYRRDGA-LLLAASSLSSRTWGGSIWVFKDPEGAP------NESLCTAGVQTEAGVTDVAWVSEKG--IL 109 (357)
T ss_dssp -CCCSEEEEEEECSSSC-EEEEEECSSSSSCCEEEEEESSCC---------CGGGCSEEEECSSCEEEEEEETTTE--EE
T ss_pred ccccCCEEEEEECCCCC-EEEEEcCCCCccccCeEEEEECCCCCc------ceeEecccCCCCCCEEEEEEcCCCC--EE
Confidence 36999999999999997 8999987 78899999765211 1222345567999999999999764 77
Q ss_pred EEeCCCcEEEEeCCCCCCCCcccceeeeecCCcceeeEEeeCCCCcEEEEEeCCCeEEEEECCCCCCCCCeeEecccCCC
Q 014472 196 SGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSE 275 (424)
Q Consensus 196 s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~ 275 (424)
+++.||+|+|||+.++...... .....+|...|++++|+|++. +|++|+.|+.|++||+++++. +..+..|...
T Consensus 110 ~~s~dg~v~lWd~~~~~~~~~~--~~~~~~h~~~V~~v~~spdg~-~l~sgs~dg~v~iwd~~~~~~---~~~~~~h~~~ 183 (357)
T 4g56_B 110 VASDSGAVELWEILEKESLLVN--KFAKYEHDDIVKTLSVFSDGT-QAVSGGKDFSVKVWDLSQKAV---LKSYNAHSSE 183 (357)
T ss_dssp EEETTSCEEEC--------CCC--CEEECCCSSCEEEEEECSSSS-EEEEEETTSCEEEEETTTTEE---EEEECCCSSC
T ss_pred EEECCCEEEEeeccccceeEEE--eeccCCCCCCEEEEEECCCCC-EEEEEeCCCeEEEEECCCCcE---EEEEcCCCCC
Confidence 8889999999999876532221 123457999999999999987 567999999999999998654 7788899999
Q ss_pred eeEEEecCCCCeEEEEEeCCCcEEEEECCCCCCcceee--cCCCCCEEEEEEcCCCCcEEEEEeCCCeEEEeeCCCCCcc
Q 014472 276 VNCLAFNPFNEWILATGSTDKTVKLFDLRKISTALHTF--DSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEE 353 (424)
Q Consensus 276 v~~i~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~--~~~~~~v~~~~~sp~~~~~l~s~~~dg~i~iwd~~~~~~~ 353 (424)
|++++|+|++..++++++.||.|++||+++ ++++..+ ..|...+++++|+|++..+|++|+.|+.|++||++++
T Consensus 184 v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~-~~~~~~~~~~~~~~~v~~v~~sp~~~~~la~g~~d~~i~~wd~~~~--- 259 (357)
T 4g56_B 184 VNCVAACPGKDTIFLSCGEDGRILLWDTRK-PKPATRIDFCASDTIPTSVTWHPEKDDTFACGDETGNVSLVNIKNP--- 259 (357)
T ss_dssp EEEEEECTTCSSCEEEEETTSCEEECCTTS-SSCBCBCCCTTCCSCEEEEEECTTSTTEEEEEESSSCEEEEESSCG---
T ss_pred EEEEEEccCCCceeeeeccCCceEEEECCC-CceeeeeeeccccccccchhhhhcccceEEEeecccceeEEECCCC---
Confidence 999999999877899999999999999998 4554443 4567889999999998789999999999999999875
Q ss_pred cCCCccCCCCCeeeEEEcCCCCCcceEEeCCCCCcEEEEEeCCCcEEEEecCCCCC
Q 014472 354 QTPEDAEDGPPELLFIHGGHTSKISDFSWNPCEDWVISSVAEDNILQIWQMAENIY 409 (424)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~ 409 (424)
+++..+.+|...|++++|+|++..+|++++.|+.|+|||+.++.+
T Consensus 260 -----------~~~~~~~~~~~~v~~l~~sp~~~~~lasgs~D~~i~iwd~~~~~~ 304 (357)
T 4g56_B 260 -----------DSAQTSAVHSQNITGLAYSYHSSPFLASISEDCTVAVLDADFSEV 304 (357)
T ss_dssp -----------GGCEEECCCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTSCEE
T ss_pred -----------cEeEEEeccceeEEEEEEcCCCCCEEEEEeCCCEEEEEECCCCcE
Confidence 456777899999999999999865799999999999999987743
No 21
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=8e-38 Score=288.13 Aligned_cols=255 Identities=15% Similarity=0.244 Sum_probs=217.5
Q ss_pred EeccCCceeEEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCCeeeEEecCCCCceEEEEeCC
Q 014472 121 QINHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDD 200 (424)
Q Consensus 121 ~~~h~~~v~~i~~~p~~~~~latg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~d 200 (424)
..+|.+.|++++|+|++. +||+|+.||+|+|||... ......+..|...|.+++|+|++. +|++|+.|
T Consensus 60 l~gH~~~V~~~~~s~d~~-~l~s~s~Dg~v~vWd~~~----------~~~~~~~~~~~~~v~~~~~sp~g~-~lasg~~d 127 (354)
T 2pbi_B 60 LKGHGNKVLCMDWCKDKR-RIVSSSQDGKVIVWDSFT----------TNKEHAVTMPCTWVMACAYAPSGC-AIACGGLD 127 (354)
T ss_dssp EECCSSCEEEEEECTTSS-EEEEEETTSEEEEEETTT----------CCEEEEEECSSSCCCEEEECTTSS-EEEEESTT
T ss_pred ecCCCCeEEEEEECCCCC-EEEEEeCCCeEEEEECCC----------CCcceEEecCCCCEEEEEECCCCC-EEEEeeCC
Confidence 457999999999999886 899999999999999876 344567778999999999999988 79999999
Q ss_pred CcEEEEeCCCCCCCCcccceeeeecCCcceeeEEeeCCCCcEEEEEeCCCeEEEEECCCCCCCCCeeEecccCCCeeEEE
Q 014472 201 AQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLA 280 (424)
Q Consensus 201 g~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~ 280 (424)
+.+++|++..............+..|...|.+++|+|++. .+++++.|++|++||+++++. +..+.+|...|.+++
T Consensus 128 ~~i~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~-~l~t~s~D~~v~lwd~~~~~~---~~~~~~h~~~v~~~~ 203 (354)
T 2pbi_B 128 NKCSVYPLTFDKNENMAAKKKSVAMHTNYLSACSFTNSDM-QILTASGDGTCALWDVESGQL---LQSFHGHGADVLCLD 203 (354)
T ss_dssp SEEEEEECCCCTTCCSGGGCEEEEECSSCEEEEEECSSSS-EEEEEETTSEEEEEETTTCCE---EEEEECCSSCEEEEE
T ss_pred CCEEEEEEeccccccccccceeeeccCCcEEEEEEeCCCC-EEEEEeCCCcEEEEeCCCCeE---EEEEcCCCCCeEEEE
Confidence 9999999976543333344566778999999999999986 456999999999999998664 778889999999999
Q ss_pred ecCCC-CeEEEEEeCCCcEEEEECCCCCCcceeecCCCCCEEEEEEcCCCCcEEEEEeCCCeEEEeeCCCCCcccCCCcc
Q 014472 281 FNPFN-EWILATGSTDKTVKLFDLRKISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPEDA 359 (424)
Q Consensus 281 ~~~~~-~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~ 359 (424)
|+|.. ..+|++|+.||.|++||+++ +.++..+..|...|.+++|+|++. +|++++.|++|++||++...
T Consensus 204 ~~~~~~g~~l~sgs~Dg~v~~wd~~~-~~~~~~~~~h~~~v~~v~~~p~~~-~l~s~s~D~~v~lwd~~~~~-------- 273 (354)
T 2pbi_B 204 LAPSETGNTFVSGGCDKKAMVWDMRS-GQCVQAFETHESDVNSVRYYPSGD-AFASGSDDATCRLYDLRADR-------- 273 (354)
T ss_dssp ECCCSSCCEEEEEETTSCEEEEETTT-CCEEEEECCCSSCEEEEEECTTSS-EEEEEETTSCEEEEETTTTE--------
T ss_pred EEeCCCCCEEEEEeCCCeEEEEECCC-CcEEEEecCCCCCeEEEEEeCCCC-EEEEEeCCCeEEEEECCCCc--------
Confidence 98852 24799999999999999998 788899999999999999999995 79999999999999998742
Q ss_pred CCCCCeeeEEEc--CCCCCcceEEeCCCCCcEEEEEeCCCcEEEEecCCCC
Q 014472 360 EDGPPELLFIHG--GHTSKISDFSWNPCEDWVISSVAEDNILQIWQMAENI 408 (424)
Q Consensus 360 ~~~~~~~~~~~~--~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~ 408 (424)
.+..+. .+...+.+++|+|+++ +|++++.|+.|++||+.++.
T Consensus 274 ------~~~~~~~~~~~~~~~~~~~s~~g~-~l~~g~~d~~i~vwd~~~~~ 317 (354)
T 2pbi_B 274 ------EVAIYSKESIIFGASSVDFSLSGR-LLFAGYNDYTINVWDVLKGS 317 (354)
T ss_dssp ------EEEEECCTTCCSCEEEEEECTTSS-EEEEEETTSCEEEEETTTCS
T ss_pred ------EEEEEcCCCcccceeEEEEeCCCC-EEEEEECCCcEEEEECCCCc
Confidence 233333 3344688999999999 79999999999999997663
No 22
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=6.7e-38 Score=285.90 Aligned_cols=259 Identities=20% Similarity=0.361 Sum_probs=198.4
Q ss_pred cCCceeEEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCCeeeEEecCCCCceEEEEeCCCcE
Q 014472 124 HDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDDAQI 203 (424)
Q Consensus 124 h~~~v~~i~~~p~~~~~latg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i 203 (424)
|.+.|++++|+|++. +||+|+.|+.|+||++....... ........+.+|...|.+++|+|++. +|++|+.|++|
T Consensus 57 h~~~v~~v~~sp~~~-~las~s~D~~v~iw~~~~~~~~~---~~~~~~~~~~~h~~~V~~v~~sp~g~-~las~s~D~~v 131 (330)
T 2hes_X 57 HKKAIRSVAWRPHTS-LLAAGSFDSTVSIWAKEESADRT---FEMDLLAIIEGHENEVKGVAWSNDGY-YLATCSRDKSV 131 (330)
T ss_dssp CCSCEEEEEECTTSS-EEEEEETTSCEEEEEC----------CCCEEEEEEC----CEEEEEECTTSC-EEEEEETTSCE
T ss_pred ccCCEEEEEECCCCC-EEEEEeCCCcEEEEEcccCcCcc---ccceeEEEEcCCCCcEEEEEECCCCC-EEEEEeCCCEE
Confidence 999999999999886 89999999999999986421100 11234567889999999999999887 89999999999
Q ss_pred EEEeCCCCCCCCcccceeeeecCCcceeeEEeeCCCCcEEEEEeCCCeEEEEECCCCCCCCCeeEecccCCCeeEEEecC
Q 014472 204 CLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNP 283 (424)
Q Consensus 204 ~vwd~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~~ 283 (424)
++||+.... .....+..+.+|...|.+++|+|++. +|++++.|++|++||++.+. ..++..+.+|...|.+++|+|
T Consensus 132 ~iwd~~~~~--~~~~~~~~~~~h~~~v~~v~~~p~~~-~l~s~s~D~~i~iW~~~~~~-~~~~~~~~~h~~~v~~~~~~~ 207 (330)
T 2hes_X 132 WIWETDESG--EEYECISVLQEHSQDVKHVIWHPSEA-LLASSSYDDTVRIWKDYDDD-WECVAVLNGHEGTVWSSDFDK 207 (330)
T ss_dssp EEEECCTTC--CCCEEEEEECCCSSCEEEEEECSSSS-EEEEEETTSCEEEEEEETTE-EEEEEEECCCSSCEEEEEECC
T ss_pred EEEeccCCC--CCeEEEEEeccCCCceEEEEECCCCC-EEEEEcCCCeEEEEECCCCC-eeEEEEccCCCCcEEEEEecC
Confidence 999995432 12234566788999999999999986 66799999999999987653 134677889999999999999
Q ss_pred CC-CeEEEEEeCCCcEEEEECCCCC-------CcceeecC-CCCCEEEEEEcCCCCcEEEEEeCCCeEEEeeCCCCCccc
Q 014472 284 FN-EWILATGSTDKTVKLFDLRKIS-------TALHTFDS-HKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQ 354 (424)
Q Consensus 284 ~~-~~~l~~g~~dg~i~iwd~~~~~-------~~~~~~~~-~~~~v~~~~~sp~~~~~l~s~~~dg~i~iwd~~~~~~~~ 354 (424)
++ ..+|++|+.|++|++||++... .....+.. |...|.+++|++++ +|++++.||.|+||+...+..
T Consensus 208 ~~~~~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~~--~l~s~~~dg~v~iw~~~~~~~-- 283 (330)
T 2hes_X 208 TEGVFRLCSGSDDSTVRVWKYMGDDEDDQQEWVCEAILPDVHKRQVYNVAWGFNG--LIASVGADGVLAVYEEVDGEW-- 283 (330)
T ss_dssp SSSSCEEEEEETTSCEEEEEEEEECTTSCEEEEEEEECCSCCSSCEEEEEECTTS--CEEEEETTSCEEEEEEETTEE--
T ss_pred CCCeeEEEEEeCCCeEEEEEecCCCccccceeEEeeecccccccceEEEEEcCCC--EEEEEeCCCEEEEEEcCCCce--
Confidence 83 2369999999999999997521 23344444 89999999999765 589999999999999865310
Q ss_pred CCCccCCCCCeee-EEEcCCCC-CcceEEeCC--CCCcEEEEEeCCCcEEEEecCC
Q 014472 355 TPEDAEDGPPELL-FIHGGHTS-KISDFSWNP--CEDWVISSVAEDNILQIWQMAE 406 (424)
Q Consensus 355 ~~~~~~~~~~~~~-~~~~~h~~-~v~~~~~~~--~~~~~l~s~~~d~~i~iw~~~~ 406 (424)
+.+ ....+|.. .|++++|+| +++ +|++++.||.|+||++..
T Consensus 284 ----------~~~~~~~~~h~~~~v~~v~~~~~~~~~-~las~s~Dg~v~~W~~~~ 328 (330)
T 2hes_X 284 ----------KVFAKRALCHGVYEINVVKWLELNGKT-ILATGGDDGIVNFWSLEK 328 (330)
T ss_dssp ----------EEEEEESCTTTTSCEEEEEEC-----C-CEEEEETTSEEEEEEC--
T ss_pred ----------EEEeccccccccceEEEEEEecCCCce-EEEEecCCCcEEEEEecc
Confidence 222 23357876 899999999 577 799999999999999865
No 23
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=100.00 E-value=2.2e-39 Score=293.84 Aligned_cols=260 Identities=18% Similarity=0.305 Sum_probs=205.8
Q ss_pred eccCCceeEEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCCeeeEEecCC-CCceEEEEeCC
Q 014472 122 INHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKF-KEGHLLSGSDD 200 (424)
Q Consensus 122 ~~h~~~v~~i~~~p~~~~~latg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~-~~~~l~s~~~d 200 (424)
.+|.+.|++++|+|++. +||+|+.|++|+|||+.. +.......+.+|...|.+++|++. ...+|++|+.|
T Consensus 10 ~~H~~~V~~v~~s~~g~-~lasgs~D~~v~lwd~~~--------~~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D 80 (316)
T 3bg1_A 10 TSHEDMIHDAQMDYYGT-RLATCSSDRSVKIFDVRN--------GGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYD 80 (316)
T ss_dssp ----CCEEEEEECGGGC-EEEEEETTTEEEEEEEET--------TEEEEEEEEECCSSCEEEEEECCGGGSSCEEEEETT
T ss_pred ccccCeEEEeeEcCCCC-EEEEEeCCCeEEEEEecC--------CCcEEEEEEcCCCccEEEEEeCCCCCCCEEEEEECC
Confidence 47999999999999887 899999999999999976 222345678899999999999863 23379999999
Q ss_pred CcEEEEeCCCCCCCCcccceeeeecCCcceeeEEeeCCC-CcEEEEEeCCCeEEEEECCCCCCCCCeeEecccCCCeeEE
Q 014472 201 AQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRH-EYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCL 279 (424)
Q Consensus 201 g~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~-~~~~~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~i 279 (424)
++|++||++++.. .....+.+|...|++++|+|++ ..+|++|+.|+.|++||++..........+..|...|.++
T Consensus 81 ~~v~iWd~~~~~~----~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~~~~~~~~h~~~v~~~ 156 (316)
T 3bg1_A 81 RKVIIWREENGTW----EKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKKINNAHTIGCNAV 156 (316)
T ss_dssp SCEEEECCSSSCC----CEEEEECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEEECCBTTSSSSCBCCC
T ss_pred CEEEEEECCCCcc----eEEEEccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCcceeeeeccccCCcceE
Confidence 9999999976532 2345567899999999999983 3467899999999999998754211223456789999999
Q ss_pred EecCCC----------------CeEEEEEeCCCcEEEEECCCCC--CcceeecCCCCCEEEEEEcCCC---CcEEEEEeC
Q 014472 280 AFNPFN----------------EWILATGSTDKTVKLFDLRKIS--TALHTFDSHKEEVFQVGWNPKN---ETILASCCL 338 (424)
Q Consensus 280 ~~~~~~----------------~~~l~~g~~dg~i~iwd~~~~~--~~~~~~~~~~~~v~~~~~sp~~---~~~l~s~~~ 338 (424)
+|+|+. ..+|++|+.|+.|++||++... .++..+.+|...|.+++|+|++ ..+|++++.
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l~~h~~~V~~v~~sp~~~~~~~~las~s~ 236 (316)
T 3bg1_A 157 SWAPAVVPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKLEAHSDWVRDVAWAPSIGLPTSTIASCSQ 236 (316)
T ss_dssp EECCCCCC------CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEEEEECCBCCSSCEEEEECCCCSSCSCCEEEEEET
T ss_pred EEccccCCccccccccccCccccceEEEecCCCeEEEEEeCCCCccceeeecccCCCceEEEEecCCCCCCCceEEEEcC
Confidence 999973 1369999999999999997532 3567788999999999999986 247999999
Q ss_pred CCeEEEeeCCCCCcccCCCccCCCCCeeeEEEcCCCCCcceEEeCCCCCcEEEEEeCCCcEEEEecC
Q 014472 339 GRRLMVWDLSRIDEEQTPEDAEDGPPELLFIHGGHTSKISDFSWNPCEDWVISSVAEDNILQIWQMA 405 (424)
Q Consensus 339 dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iw~~~ 405 (424)
|++|+||++....... .....+.+|...|++++|+|+++ +|++++.|+.|+||+..
T Consensus 237 D~~v~iw~~~~~~~~~----------~~~~~~~~~~~~v~~v~~sp~g~-~las~~~D~~v~lw~~~ 292 (316)
T 3bg1_A 237 DGRVFIWTCDDASSNT----------WSPKLLHKFNDVVWHVSWSITAN-ILAVSGGDNKVTLWKES 292 (316)
T ss_dssp TCEEEEEECSSTTCCC----------CBCCEEEECSSCEEEEEECTTTC-CEEEEESSSCEEEEEEC
T ss_pred CCeEEEEEccCccccc----------hhhhhhhcCCCcEEEEEEcCCCC-EEEEEcCCCeEEEEEEC
Confidence 9999999997632100 01112345788999999999999 69999999999999986
No 24
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=6.8e-38 Score=309.46 Aligned_cols=263 Identities=17% Similarity=0.278 Sum_probs=217.0
Q ss_pred eccCCceeEEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCCeeeEEecCCCCceEEEEeCC-
Q 014472 122 INHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDD- 200 (424)
Q Consensus 122 ~~h~~~v~~i~~~p~~~~~latg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~d- 200 (424)
.+|.+.|++++|+|++. +||+|+.||+|+|||+.. ........+.+|.+.|.+++|+|++. +|++++.+
T Consensus 56 ~~h~~~v~~~~~spdg~-~lasg~~d~~v~lWd~~~--------~~~~~~~~~~~~~~~v~~v~fs~dg~-~l~~~~~~~ 125 (611)
T 1nr0_A 56 TEHSHQTTVAKTSPSGY-YCASGDVHGNVRIWDTTQ--------TTHILKTTIPVFSGPVKDISWDSESK-RIAAVGEGR 125 (611)
T ss_dssp CCCSSCEEEEEECTTSS-EEEEEETTSEEEEEESSS--------TTCCEEEEEECSSSCEEEEEECTTSC-EEEEEECCS
T ss_pred cCCCCceEEEEECCCCc-EEEEEeCCCCEEEeECCC--------CcceeeEeecccCCceEEEEECCCCC-EEEEEECCC
Confidence 47999999999999986 899999999999999865 22333457889999999999999988 68777764
Q ss_pred ---CcEEEEeCCCCCCCCcccceeeeecCCcceeeEEeeCCCCcEEEEEeCCCeEEEEECCCCCCCCCeeEecccCCCee
Q 014472 201 ---AQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVN 277 (424)
Q Consensus 201 ---g~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~ 277 (424)
+.|++||... ....+.+|...|++++|+|+++..|++|+.|++|++||.+..+ ....+.+|...|+
T Consensus 126 ~~~~~v~~wd~~~--------~~~~l~gh~~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~~~---~~~~l~~H~~~V~ 194 (611)
T 1nr0_A 126 ERFGHVFLFDTGT--------SNGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFK---FKSTFGEHTKFVH 194 (611)
T ss_dssp SCSEEEEETTTCC--------BCBCCCCCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTTBE---EEEEECCCSSCEE
T ss_pred CceeEEEEeeCCC--------CcceecCCCCCceEEEECCCCCeEEEEEeCCCeEEEEECCCCe---EeeeeccccCceE
Confidence 4788888532 2345678999999999999998778899999999999987754 3677889999999
Q ss_pred EEEecCCCCeEEEEEeCCCcEEEEECCCCCCcceeec-------CCCCCEEEEEEcCCCCcEEEEEeCCCeEEEeeCCCC
Q 014472 278 CLAFNPFNEWILATGSTDKTVKLFDLRKISTALHTFD-------SHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRI 350 (424)
Q Consensus 278 ~i~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~-------~~~~~v~~~~~sp~~~~~l~s~~~dg~i~iwd~~~~ 350 (424)
+++|+|++. +||+|+.|++|++||+++ +..+..+. +|...|.+++|+|++. +|++++.|++|++||+.++
T Consensus 195 ~v~fspdg~-~las~s~D~~i~lwd~~~-g~~~~~~~~~~~~~~~h~~~V~~v~~spdg~-~l~s~s~D~~v~lWd~~~~ 271 (611)
T 1nr0_A 195 SVRYNPDGS-LFASTGGDGTIVLYNGVD-GTKTGVFEDDSLKNVAHSGSVFGLTWSPDGT-KIASASADKTIKIWNVATL 271 (611)
T ss_dssp EEEECTTSS-EEEEEETTSCEEEEETTT-CCEEEECBCTTSSSCSSSSCEEEEEECTTSS-EEEEEETTSEEEEEETTTT
T ss_pred EEEECCCCC-EEEEEECCCcEEEEECCC-CcEeeeeccccccccccCCCEEEEEECCCCC-EEEEEeCCCeEEEEeCCCC
Confidence 999999998 699999999999999987 56666663 7999999999999996 7999999999999999876
Q ss_pred CcccCCCccC-----------------------------CCCCeeeEEEcCCCCCcceEEeCCCCCcEEEEEeCCCcEEE
Q 014472 351 DEEQTPEDAE-----------------------------DGPPELLFIHGGHTSKISDFSWNPCEDWVISSVAEDNILQI 401 (424)
Q Consensus 351 ~~~~~~~~~~-----------------------------~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~i 401 (424)
.......... .........+.+|...|++++|+|+++ +|++++.|+.|++
T Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~i~~~~~~~~~~~~~~~gh~~~v~~l~~spdg~-~l~s~s~D~~v~~ 350 (611)
T 1nr0_A 272 KVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINFVNPELGSIDQVRYGHNKAITALSSSADGK-TLFSADAEGHINS 350 (611)
T ss_dssp EEEEEEECCSSGGGCEEEEEECSSCEEEEETTCCEEEEETTTTEEEEEECCCSSCEEEEEECTTSS-EEEEEETTSCEEE
T ss_pred ceeeeecCCCCccceeEEEEEcCCEEEEEeCCCcEEEEeCCCCCcceEEcCCCCCEEEEEEeCCCC-EEEEEeCCCcEEE
Confidence 5432111000 001134556789999999999999999 6999999999999
Q ss_pred EecCCCCC
Q 014472 402 WQMAENIY 409 (424)
Q Consensus 402 w~~~~~~~ 409 (424)
||+.++..
T Consensus 351 Wd~~~~~~ 358 (611)
T 1nr0_A 351 WDISTGIS 358 (611)
T ss_dssp EETTTCCE
T ss_pred EECCCCce
Confidence 99987643
No 25
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=6.8e-38 Score=301.08 Aligned_cols=330 Identities=11% Similarity=0.117 Sum_probs=229.9
Q ss_pred CCCCccEEEEccCCCCCCCCCCceEEEEEeecC--------------CCCCCCeEEEEEEEcCCCCCCcccCCCCCcCCC
Q 014472 40 LEWPSLTVEWLPDREEPPGKDYSVQKMILGTHT--------------SENEPNYLMLAQVQLPLDDSENDARHYDDDRSD 105 (424)
Q Consensus 40 ~~~p~~~~~~~p~~~~~~~~~~~~~~~~~gt~~--------------~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~ 105 (424)
+..+..+++|+|+...... .-..+++++|+.. +++.++.|+++.+.-.
T Consensus 132 ~~~~V~sv~w~p~~~~~~~-~~~~~~LAv~~~~~~~~~~~~~~~~laS~s~D~tI~iWd~~~~----------------- 193 (524)
T 2j04_B 132 VGGLVTDIAWLNIEENTDI-GKDIQYLAVAVSQYMDEPLNEHLEMFDKEKHSSCIQIFKMNTS----------------- 193 (524)
T ss_dssp CCC--CCCSCEEECCCCSS-CSSEEEEEEEEEC------------------CEEEEEEEEETT-----------------
T ss_pred CCCceeEEEecccCCCCcc-CcCCeEEEEEEecccCCccchhhhhhccCCCCceEEEEEccCC-----------------
Confidence 4677889999997632100 0123677777743 2233445556554211
Q ss_pred CCCCCCCCCcEEEEE-EeccCCceeEEEecCCC-----CcEEEEEecCCeEEEEeCCCCCCCCC-CCCCCCCcEEEecCC
Q 014472 106 FGGFGCANGKVQIIQ-QINHDGEVNRARYMPQN-----PFLIATKTVSAEVYVFDYSKHPSKPP-LDGACSPDLRLRGHS 178 (424)
Q Consensus 106 ~~~~~~~~~~~~~~~-~~~h~~~v~~i~~~p~~-----~~~latg~~dg~v~iwd~~~~~~~~~-~~~~~~~~~~~~~h~ 178 (424)
........ ...|.+.|.+++|+|++ ..+||+|+.||+|+|||+........ ......+...+.+|.
T Consensus 194 -------~~~~~~~~~l~~~~~~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~~p~~~l~~h~ 266 (524)
T 2j04_B 194 -------TLHCVKVQTIVHSFGEVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKMCEKPSLTLSLAD 266 (524)
T ss_dssp -------TCCEEEEEEEEECCCSEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEECCCSCSEEECCTT
T ss_pred -------CCCceEEEEEEecCCcEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccceeecCceEEEEcCC
Confidence 00111222 23467999999999962 34899999999999999976321100 000123456788999
Q ss_pred CCeeeEEecCCCCceEEEEeCCCcEEEEeCCCCCCCCcccceeeeecCCcceeeE--EeeCCCCcEEEEEeCCCeEEEEE
Q 014472 179 TEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDV--AWHLRHEYLFGSVGDDQYLLIWD 256 (424)
Q Consensus 179 ~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~i--~~~~~~~~~~~s~~~dg~i~i~d 256 (424)
..|++++|++. . .|++|+.||+|++||++++.. +...+.+|...|++| .|+|++..+||+|+.|++|+|||
T Consensus 267 ~~v~sv~~s~~-~-~lasgs~DgtV~lWD~~~~~~-----~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD 339 (524)
T 2j04_B 267 SLITTFDFLSP-T-TVVCGFKNGFVAEFDLTDPEV-----PSFYDQVHDSYILSVSTAYSDFEDTVVSTVAVDGYFYIFN 339 (524)
T ss_dssp TCEEEEEESSS-S-EEEEEETTSEEEEEETTBCSS-----CSEEEECSSSCEEEEEEECCTTSCCEEEEEETTSEEEEEC
T ss_pred CCEEEEEecCC-C-eEEEEeCCCEEEEEECCCCCC-----ceEEeecccccEEEEEEEcCCCCCeEEEEeccCCeEEEEE
Confidence 99999999985 3 799999999999999986522 234567899999999 56777646889999999999999
Q ss_pred CCCCCCCCCeeEecccCC--CeeEEEecCCCCeEEEEEeCCCcEEEEECCCCCCcceeecCCCCCEEEEEEcCCCCcEEE
Q 014472 257 LRTPSVSKPVQSVVAHQS--EVNCLAFNPFNEWILATGSTDKTVKLFDLRKISTALHTFDSHKEEVFQVGWNPKNETILA 334 (424)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~--~v~~i~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~ 334 (424)
+++++. +..+.+|.. .|.+++|+|++. .|++++.|++|++||++. ...+..+.+|...|++++|+|+++ +|+
T Consensus 340 ~~~~~~---~~~~~~~~~~~~v~~v~fsp~~~-~l~s~~~d~tv~lwd~~~-~~~~~~l~gH~~~V~sva~Sp~g~-~l~ 413 (524)
T 2j04_B 340 PKDIAT---TKTTVSRFRGSNLVPVVYCPQIY-SYIYSDGASSLRAVPSRA-AFAVHPLVSRETTITAIGVSRLHP-MVL 413 (524)
T ss_dssp GGGHHH---HCEEEEECSCCSCCCEEEETTTT-EEEEECSSSEEEEEETTC-TTCCEEEEECSSCEEEEECCSSCC-BCE
T ss_pred CCCCCc---ccccccccccCcccceEeCCCcC-eEEEeCCCCcEEEEECcc-cccceeeecCCCceEEEEeCCCCC-eEE
Confidence 998654 334445543 588999999988 588999999999999998 667778889999999999999997 689
Q ss_pred EEeCCCeEEEeeCCCCCccc--------------CCCccCCC----------------CCeeeEEEcCCCCCcceEEeCC
Q 014472 335 SCCLGRRLMVWDLSRIDEEQ--------------TPEDAEDG----------------PPELLFIHGGHTSKISDFSWNP 384 (424)
Q Consensus 335 s~~~dg~i~iwd~~~~~~~~--------------~~~~~~~~----------------~~~~~~~~~~h~~~v~~~~~~~ 384 (424)
+|+.||+|++||+....... ......++ ...++..+.+|...|++++|+|
T Consensus 414 Sgs~Dgtv~lwd~~~~~~~~~~~~~~~~~~~~v~~v~~sp~g~~~~~~~~~~~~~~~~~g~~~~~l~gh~~~V~~Vafsp 493 (524)
T 2j04_B 414 AGSADGSLIITNAARRLLHGIKNSSATQKSLRLWKWDYSIKDDKYRIDSSYEVYPLTVNDVSKAKIDAHGINITCTKWNE 493 (524)
T ss_dssp EEETTTEEECCBSCSSTTTCC------CCCCEEEECBCCSSSCEEEECCCCCCCC-------------CCCSCCCEEECC
T ss_pred EEECCCEEEEEechHhhccccccCccceeeeEEEEeccCCCCCeEEccCCceecccccCCcceeeecCCCceEEEEECCC
Confidence 99999999999975431110 00000000 1234566788999999999999
Q ss_pred CCC--cEEEEEeCCCcEEEEecCCC
Q 014472 385 CED--WVISSVAEDNILQIWQMAEN 407 (424)
Q Consensus 385 ~~~--~~l~s~~~d~~i~iw~~~~~ 407 (424)
+++ .++|+|+.||.|+||++...
T Consensus 494 ~~~~~~~lAsg~~~g~vrlw~l~~~ 518 (524)
T 2j04_B 494 TSAGGKCYAFSNSAGLLTLEYLSLE 518 (524)
T ss_dssp STTTTTEEEEECTTSEEEEEECSCC
T ss_pred CCCccHHHHhhccCceEEEEEcccc
Confidence 963 27999999999999998754
No 26
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.4e-37 Score=283.81 Aligned_cols=265 Identities=17% Similarity=0.296 Sum_probs=205.4
Q ss_pred EeccCCceeEEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEE-ec-CCCCeeeEEecCCCCceEEEEe
Q 014472 121 QINHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRL-RG-HSTEGYGLSWSKFKEGHLLSGS 198 (424)
Q Consensus 121 ~~~h~~~v~~i~~~p~~~~~latg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~-~~-h~~~v~~l~~~~~~~~~l~s~~ 198 (424)
..+|.+.|.+++|+|+ +||+|+.|+.|+||++.. ........+ .+ |...|.+++|+|++. +|++|+
T Consensus 10 ~~~h~~~v~~~~~s~~---~las~~~D~~i~lw~~~~--------~~~~~~~~~~~~~h~~~v~~v~~sp~~~-~las~s 77 (330)
T 2hes_X 10 LKLYKEKIWSFDFSQG---ILATGSTDRKIKLVSVKY--------DDFTLIDVLDETAHKKAIRSVAWRPHTS-LLAAGS 77 (330)
T ss_dssp EECCSSCEEEEEEETT---EEEEEESSSCEEEEECSS--------SCCEEEEEECTTCCCSCEEEEEECTTSS-EEEEEE
T ss_pred eccCCCceeeeccCCC---EEEEEcCCCEEEEEEecC--------CCeEEEEEEecCCccCCEEEEEECCCCC-EEEEEe
Confidence 3479999999999985 899999999999999976 112223344 34 999999999999887 899999
Q ss_pred CCCcEEEEeCCCCCCC-CcccceeeeecCCcceeeEEeeCCCCcEEEEEeCCCeEEEEECCCC-CCCCCeeEecccCCCe
Q 014472 199 DDAQICLWDINAAPKN-KSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTP-SVSKPVQSVVAHQSEV 276 (424)
Q Consensus 199 ~dg~i~vwd~~~~~~~-~~~~~~~~~~~~~~~v~~i~~~~~~~~~~~s~~~dg~i~i~d~~~~-~~~~~~~~~~~~~~~v 276 (424)
.|++|++||+...... .....+..+.+|...|.+++|+|++. +|++|+.|++|++||++.. .....+..+..|...|
T Consensus 78 ~D~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g~-~las~s~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v 156 (330)
T 2hes_X 78 FDSTVSIWAKEESADRTFEMDLLAIIEGHENEVKGVAWSNDGY-YLATCSRDKSVWIWETDESGEEYECISVLQEHSQDV 156 (330)
T ss_dssp TTSCEEEEEC-------CCCEEEEEEC----CEEEEEECTTSC-EEEEEETTSCEEEEECCTTCCCCEEEEEECCCSSCE
T ss_pred CCCcEEEEEcccCcCccccceeEEEEcCCCCcEEEEEECCCCC-EEEEEeCCCEEEEEeccCCCCCeEEEEEeccCCCce
Confidence 9999999999643211 12244566788999999999999986 5679999999999999543 2233456778899999
Q ss_pred eEEEecCCCCeEEEEEeCCCcEEEEECCCCC-CcceeecCCCCCEEEEEEcCCC-CcEEEEEeCCCeEEEeeCCCCCccc
Q 014472 277 NCLAFNPFNEWILATGSTDKTVKLFDLRKIS-TALHTFDSHKEEVFQVGWNPKN-ETILASCCLGRRLMVWDLSRIDEEQ 354 (424)
Q Consensus 277 ~~i~~~~~~~~~l~~g~~dg~i~iwd~~~~~-~~~~~~~~~~~~v~~~~~sp~~-~~~l~s~~~dg~i~iwd~~~~~~~~ 354 (424)
++++|+|++. +|++|+.|++|++||++... .++..+.+|...|.+++|+|++ ..+|++++.|++|++||+.......
T Consensus 157 ~~v~~~p~~~-~l~s~s~D~~i~iW~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~D~~v~iw~~~~~~~~~ 235 (330)
T 2hes_X 157 KHVIWHPSEA-LLASSSYDDTVRIWKDYDDDWECVAVLNGHEGTVWSSDFDKTEGVFRLCSGSDDSTVRVWKYMGDDEDD 235 (330)
T ss_dssp EEEEECSSSS-EEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCSSSSCEEEEEETTSCEEEEEEEEECTTS
T ss_pred EEEEECCCCC-EEEEEcCCCeEEEEECCCCCeeEEEEccCCCCcEEEEEecCCCCeeEEEEEeCCCeEEEEEecCCCccc
Confidence 9999999987 69999999999999987622 5778899999999999999983 2479999999999999987542110
Q ss_pred CCCccCCCCCeeeEEEcC-CCCCcceEEeCCCCCcEEEEEeCCCcEEEEecCCC
Q 014472 355 TPEDAEDGPPELLFIHGG-HTSKISDFSWNPCEDWVISSVAEDNILQIWQMAEN 407 (424)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~-h~~~v~~~~~~~~~~~~l~s~~~d~~i~iw~~~~~ 407 (424)
. ....+...+.+ |...|++++|++++ +|++++.||.|+||++.++
T Consensus 236 ~------~~~~~~~~~~~~h~~~v~~v~~s~~~--~l~s~~~dg~v~iw~~~~~ 281 (330)
T 2hes_X 236 Q------QEWVCEAILPDVHKRQVYNVAWGFNG--LIASVGADGVLAVYEEVDG 281 (330)
T ss_dssp C------EEEEEEEECCSCCSSCEEEEEECTTS--CEEEEETTSCEEEEEEETT
T ss_pred c------ceeEEeeecccccccceEEEEEcCCC--EEEEEeCCCEEEEEEcCCC
Confidence 0 00123334444 88999999999765 5889999999999998765
No 27
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=1.6e-36 Score=274.57 Aligned_cols=260 Identities=22% Similarity=0.405 Sum_probs=217.4
Q ss_pred EEeccCCceeEEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCCeeeEEecCCCCceEEEEeC
Q 014472 120 QQINHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSD 199 (424)
Q Consensus 120 ~~~~h~~~v~~i~~~p~~~~~latg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~ 199 (424)
...+|.+.|++++|+|++. +||+|+.||.|++|++.. ......+.+|...|.+++|+|++. +|++|+.
T Consensus 18 ~~~gh~~~v~~~~~s~~~~-~l~s~~~dg~i~iw~~~~----------~~~~~~~~~h~~~v~~~~~~~~~~-~l~s~~~ 85 (312)
T 4ery_A 18 TLAGHTKAVSSVKFSPNGE-WLASSSADKLIKIWGAYD----------GKFEKTISGHKLGISDVAWSSDSN-LLVSASD 85 (312)
T ss_dssp EECCCSSCEEEEEECTTSS-EEEEEETTSCEEEEETTT----------CCEEEEECCCSSCEEEEEECTTSS-EEEEEET
T ss_pred EEcccCCcEEEEEECCCCC-EEEEeeCCCeEEEEeCCC----------cccchhhccCCCceEEEEEcCCCC-EEEEECC
Confidence 3457999999999999887 899999999999999876 345667889999999999999887 7999999
Q ss_pred CCcEEEEeCCCCCCCCcccceeeeecCCcceeeEEeeCCCCcEEEEEeCCCeEEEEECCCCCCCCCeeEecccCCCeeEE
Q 014472 200 DAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCL 279 (424)
Q Consensus 200 dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~i 279 (424)
||.|++||+.++ ..+..+.+|...|.+++|+|++. ++++|+.|+.|++||+++++. +..+..|..+|.++
T Consensus 86 d~~i~vwd~~~~------~~~~~~~~~~~~v~~~~~~~~~~-~l~s~~~d~~i~iwd~~~~~~---~~~~~~~~~~v~~~ 155 (312)
T 4ery_A 86 DKTLKIWDVSSG------KCLKTLKGHSNYVFCCNFNPQSN-LIVSGSFDESVRIWDVKTGKC---LKTLPAHSDPVSAV 155 (312)
T ss_dssp TSEEEEEETTTC------CEEEEEECCSSCEEEEEECSSSS-EEEEEETTSCEEEEETTTCCE---EEEECCCSSCEEEE
T ss_pred CCEEEEEECCCC------cEEEEEcCCCCCEEEEEEcCCCC-EEEEEeCCCcEEEEECCCCEE---EEEecCCCCcEEEE
Confidence 999999999876 34566788999999999999986 567999999999999998653 77788899999999
Q ss_pred EecCCCCeEEEEEeCCCcEEEEECCCCCCcceee-cCCCCCEEEEEEcCCCCcEEEEEeCCCeEEEeeCCCCCcccCCCc
Q 014472 280 AFNPFNEWILATGSTDKTVKLFDLRKISTALHTF-DSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPED 358 (424)
Q Consensus 280 ~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~-~~~~~~v~~~~~sp~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~ 358 (424)
+|+|++. +|++|+.||.|++||+++ +..+..+ ..+...+..++|+|+++ +|++++.|+.|++||++.+........
T Consensus 156 ~~~~~~~-~l~~~~~d~~i~~wd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~~~d~~i~iwd~~~~~~~~~~~~ 232 (312)
T 4ery_A 156 HFNRDGS-LIVSSSYDGLCRIWDTAS-GQCLKTLIDDDNPPVSFVKFSPNGK-YILAATLDNTLKLWDYSKGKCLKTYTG 232 (312)
T ss_dssp EECTTSS-EEEEEETTSCEEEEETTT-CCEEEEECCSSCCCEEEEEECTTSS-EEEEEETTTEEEEEETTTTEEEEEECS
T ss_pred EEcCCCC-EEEEEeCCCcEEEEECCC-CceeeEEeccCCCceEEEEECCCCC-EEEEEcCCCeEEEEECCCCcEEEEEEe
Confidence 9999988 699999999999999998 4555544 45677899999999996 789999999999999987542211000
Q ss_pred -----------------------cCC--------CCCeeeEEEcCCCCCcceEEeCCCCCcEEEEEe--CCCcEEEEecC
Q 014472 359 -----------------------AED--------GPPELLFIHGGHTSKISDFSWNPCEDWVISSVA--EDNILQIWQMA 405 (424)
Q Consensus 359 -----------------------~~~--------~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~--~d~~i~iw~~~ 405 (424)
..+ ...+++..+.+|...|.+++|+|+++ ++++++ .|+.|++|+..
T Consensus 233 ~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~p~~~-~l~s~~~~~d~~i~~W~~d 311 (312)
T 4ery_A 233 HKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTEN-IIASAALENDKTIKLWKSD 311 (312)
T ss_dssp SCCSSSCCCEEEECSSSCEEEECCTTSCEEEEETTTCCEEEEECCCSSCEEEEEECSSSS-EEEEEECTTTCCEEEEECC
T ss_pred cCCceEEEEEEEEeCCCcEEEEECCCCEEEEEECCCchhhhhhhccCCcEEEEeecCcCC-ceEEEEccCCccEEEecCC
Confidence 001 12345677889999999999999999 688876 69999999974
No 28
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=2.8e-36 Score=276.76 Aligned_cols=263 Identities=20% Similarity=0.305 Sum_probs=204.6
Q ss_pred EEEeccCCceeEEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCCeeeEEecCCCCceEEEEe
Q 014472 119 IQQINHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGS 198 (424)
Q Consensus 119 ~~~~~h~~~v~~i~~~p~~~~~latg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~ 198 (424)
....+|...|++++|+|++. ++++|+.|++|+|||+.+ ......+.+|...|.+++|+|++. +|++|+
T Consensus 70 ~~l~~h~~~V~~~~~~~~~~-~l~s~s~D~~v~lwd~~~----------~~~~~~~~~h~~~v~~v~~sp~~~-~l~s~~ 137 (343)
T 2xzm_R 70 KALTGHNHFVSDLALSQENC-FAISSSWDKTLRLWDLRT----------GTTYKRFVGHQSEVYSVAFSPDNR-QILSAG 137 (343)
T ss_dssp EEECCCSSCEEEEEECSSTT-EEEEEETTSEEEEEETTS----------SCEEEEEECCCSCEEEEEECSSTT-EEEEEE
T ss_pred chhccCCCceEEEEECCCCC-EEEEEcCCCcEEEEECCC----------CcEEEEEcCCCCcEEEEEECCCCC-EEEEEc
Confidence 33457999999999999886 899999999999999987 455678899999999999999887 799999
Q ss_pred CCCcEEEEeCCCCCCCCcccceeeeecCCcceeeEEeeCCCC---------cEEEEEeCCCeEEEEECCCCCCCCCeeEe
Q 014472 199 DDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHE---------YLFGSVGDDQYLLIWDLRTPSVSKPVQSV 269 (424)
Q Consensus 199 ~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~---------~~~~s~~~dg~i~i~d~~~~~~~~~~~~~ 269 (424)
.|+.|++||+.... .........|...|.+++|+|++. .+|++++.||.|++||.+. .....+
T Consensus 138 ~d~~i~~wd~~~~~----~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~----~~~~~~ 209 (343)
T 2xzm_R 138 AEREIKLWNILGEC----KFSSAEKENHSDWVSCVRYSPIMKSANKVQPFAPYFASVGWDGRLKVWNTNF----QIRYTF 209 (343)
T ss_dssp TTSCEEEEESSSCE----EEECCTTTSCSSCEEEEEECCCCCSCSCCCSSCCEEEEEETTSEEEEEETTT----EEEEEE
T ss_pred CCCEEEEEeccCCc----eeeeecccCCCceeeeeeeccccccccccCCCCCEEEEEcCCCEEEEEcCCC----ceeEEE
Confidence 99999999996321 111112236888999999999872 4678999999999999532 235667
Q ss_pred cccCCCeeEEEecCCCCeEEEEEeCCCcEEEEECCCCCCcceeecCCCCCEEEEEEcCCCCcEEEEEeCCCeEEEeeCCC
Q 014472 270 VAHQSEVNCLAFNPFNEWILATGSTDKTVKLFDLRKISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSR 349 (424)
Q Consensus 270 ~~~~~~v~~i~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~s~~~dg~i~iwd~~~ 349 (424)
..|...|++++|+|++. +|++|+.||.|++||++....+...+. +...|.+++|+|++. +++ ++.|+.|++|++.+
T Consensus 210 ~~h~~~v~~~~~s~~g~-~l~sgs~dg~v~iwd~~~~~~~~~~~~-~~~~v~~v~~sp~~~-~la-~~~d~~v~iw~~~~ 285 (343)
T 2xzm_R 210 KAHESNVNHLSISPNGK-YIATGGKDKKLLIWDILNLTYPQREFD-AGSTINQIAFNPKLQ-WVA-VGTDQGVKIFNLMT 285 (343)
T ss_dssp ECCSSCEEEEEECTTSS-EEEEEETTCEEEEEESSCCSSCSEEEE-CSSCEEEEEECSSSC-EEE-EEESSCEEEEESSS
T ss_pred cCccccceEEEECCCCC-EEEEEcCCCeEEEEECCCCcccceeec-CCCcEEEEEECCCCC-EEE-EECCCCEEEEEeCC
Confidence 88999999999999998 699999999999999966455555553 456799999999985 565 45577899999987
Q ss_pred CCcccCCCccCCCCCeeeEEEcCCCCCcceEEeCCCCCcEEEEEeCCCcEEEEecCCC
Q 014472 350 IDEEQTPEDAEDGPPELLFIHGGHTSKISDFSWNPCEDWVISSVAEDNILQIWQMAEN 407 (424)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iw~~~~~ 407 (424)
........ ....+........+|...|++++|+|+++ .|++|+.||.|++|++.++
T Consensus 286 ~~~~~~~~-~~~~~~~~~~~~~~~~~~v~~~~~sp~g~-~l~sg~~Dg~v~~w~~~~g 341 (343)
T 2xzm_R 286 QSKAPVCT-IEAEPITKAEGQKGKNPQCTSLAWNALGK-KLFAGFTDGVIRTFSFETS 341 (343)
T ss_dssp CCSCSEEE-CCCCSGGGBTTBCCSCCCEEEEEECSSSC-CEEEEETTSEEEEEEEEEE
T ss_pred CCCCceEE-eecCcchhhhhhcCCCCceEEEEECCCCC-eEEEecCCceEEEEEEEcc
Confidence 54321000 00000000111237888899999999999 5899999999999998764
No 29
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=100.00 E-value=6.1e-38 Score=295.25 Aligned_cols=265 Identities=18% Similarity=0.324 Sum_probs=221.8
Q ss_pred EeccCCceeEEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCCeeeEEecCCCCceEEEEeCC
Q 014472 121 QINHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDD 200 (424)
Q Consensus 121 ~~~h~~~v~~i~~~p~~~~~latg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~d 200 (424)
.+.|...|++++|+|++. +||+|+.||.|++|++..... .......+.+|...|.+++|+|++..+|++++.|
T Consensus 63 ~~~~~~~v~~~~~s~~~~-~l~~~~~dg~v~vw~~~~~~~------~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d 135 (416)
T 2pm9_A 63 SLQVDSKFNDLDWSHNNK-IIAGALDNGSLELYSTNEANN------AINSMARFSNHSSSVKTVKFNAKQDNVLASGGNN 135 (416)
T ss_dssp CCCCSSCEEEEEECSSSS-CEEEEESSSCEEEECCSSTTS------CCCEEEECCCSSSCCCEEEECSSSTTBEEEECSS
T ss_pred EEecCCceEEEEECCCCC-eEEEEccCCeEEEeecccccc------cccchhhccCCccceEEEEEcCCCCCEEEEEcCC
Confidence 346889999999999887 799999999999999976211 1235667888999999999999845589999999
Q ss_pred CcEEEEeCCCCCCCC---cccceeeeecCCcceeeEEeeCCCCcEEEEEeCCCeEEEEECCCCCCCCCeeEeccc-----
Q 014472 201 AQICLWDINAAPKNK---SLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAH----- 272 (424)
Q Consensus 201 g~i~vwd~~~~~~~~---~~~~~~~~~~~~~~v~~i~~~~~~~~~~~s~~~dg~i~i~d~~~~~~~~~~~~~~~~----- 272 (424)
|.|++||+.+..... ..........|...|.+++|+|++..+|++++.||.|++||+++++. +..+..+
T Consensus 136 g~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~---~~~~~~~~~~~~ 212 (416)
T 2pm9_A 136 GEIFIWDMNKCTESPSNYTPLTPGQSMSSVDEVISLAWNQSLAHVFASAGSSNFASIWDLKAKKE---VIHLSYTSPNSG 212 (416)
T ss_dssp SCEEBCBTTTTSSCTTTCCCBCCCCSCCSSCCCCEEEECSSCTTEEEEESSSSCEEEEETTTTEE---EEEECCCCCSSC
T ss_pred CeEEEEECCCCccccccccccccccccCCCCCeeEEEeCCCCCcEEEEEcCCCCEEEEECCCCCc---ceEEeccccccc
Confidence 999999998775110 11112334678999999999999667888999999999999998653 5555555
Q ss_pred -CCCeeEEEecCCCCeEEEEEeCCC---cEEEEECCCCCCcceeec-CCCCCEEEEEEcC-CCCcEEEEEeCCCeEEEee
Q 014472 273 -QSEVNCLAFNPFNEWILATGSTDK---TVKLFDLRKISTALHTFD-SHKEEVFQVGWNP-KNETILASCCLGRRLMVWD 346 (424)
Q Consensus 273 -~~~v~~i~~~~~~~~~l~~g~~dg---~i~iwd~~~~~~~~~~~~-~~~~~v~~~~~sp-~~~~~l~s~~~dg~i~iwd 346 (424)
...|.+++|+|++..+|++++.|+ .|++||++....++..+. +|...|.+++|+| ++ .+|++++.||.|++||
T Consensus 213 ~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~s~~~~-~~l~s~~~dg~v~~wd 291 (416)
T 2pm9_A 213 IKQQLSVVEWHPKNSTRVATATGSDNDPSILIWDLRNANTPLQTLNQGHQKGILSLDWCHQDE-HLLLSSGRDNTVLLWN 291 (416)
T ss_dssp CCCCEEEEEECSSCTTEEEEEECCSSSCCCCEEETTSTTSCSBCCCSCCSSCEEEEEECSSCS-SCEEEEESSSEEEEEC
T ss_pred cCCceEEEEECCCCCCEEEEEECCCCCceEEEEeCCCCCCCcEEeecCccCceeEEEeCCCCC-CeEEEEeCCCCEEEee
Confidence 789999999999876899999998 999999998657888888 8999999999999 66 5799999999999999
Q ss_pred CCCCCcccCCCccCCCCCeeeEEEcCCCCCcceEEeCCCCCcEEEEEeCCCcEEEEecCCCCCC
Q 014472 347 LSRIDEEQTPEDAEDGPPELLFIHGGHTSKISDFSWNPCEDWVISSVAEDNILQIWQMAENIYH 410 (424)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~~ 410 (424)
+.++ +.+..+.+|...|++++|+|+++.+|++++.|+.|+||++.+....
T Consensus 292 ~~~~--------------~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~d~~i~iw~~~~~~~~ 341 (416)
T 2pm9_A 292 PESA--------------EQLSQFPARGNWCFKTKFAPEAPDLFACASFDNKIEVQTLQNLTNT 341 (416)
T ss_dssp SSSC--------------CEEEEEECSSSCCCCEEECTTCTTEEEECCSSSEEEEEESCCCCCS
T ss_pred CCCC--------------ccceeecCCCCceEEEEECCCCCCEEEEEecCCcEEEEEccCCCCC
Confidence 9874 5577778999999999999999448999999999999999887543
No 30
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=100.00 E-value=4.7e-38 Score=298.05 Aligned_cols=269 Identities=17% Similarity=0.251 Sum_probs=205.2
Q ss_pred EeccCCceeEEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCCeeeEEecCCCCceEEEEeCC
Q 014472 121 QINHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDD 200 (424)
Q Consensus 121 ~~~h~~~v~~i~~~p~~~~~latg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~d 200 (424)
..+|...|++|+|+|.++.+||+|+.||.|+|||+.. ........+.+|.+.|++|+|+|.+..+|++|+.|
T Consensus 115 ~~~~~~~V~~l~~~P~~~~~lasGs~dg~i~lWd~~~--------~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D 186 (435)
T 4e54_B 115 AAPFDRRATSLAWHPTHPSTVAVGSKGGDIMLWNFGI--------KDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSME 186 (435)
T ss_dssp EEECSSCEEEEEECSSCTTCEEEEETTSCEEEECSSC--------CSCCEEECCCSSSCCCCEEEECSSCTTEEEEECSS
T ss_pred CCCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEEECCC--------CCceeEEEccCCCCCEEEEEEeCCCCCEEEEEeCC
Confidence 3478999999999998777999999999999999986 22333445678999999999999655589999999
Q ss_pred CcEEEEeCCCCCCCCcccceeeeecCCcceeeEEeeCCCCcEEEEEeCCCeEEEEECCCCCCCCCeeEecccCCCeeEEE
Q 014472 201 AQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLA 280 (424)
Q Consensus 201 g~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~ 280 (424)
|+|++||+++.. .........+...+.+++|+|++. +|++|+.||.|++||++... +..+..|...|++++
T Consensus 187 ~~v~iwd~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~-~l~~g~~dg~i~~wd~~~~~----~~~~~~h~~~v~~v~ 257 (435)
T 4e54_B 187 GTTRLQDFKGNI----LRVFASSDTINIWFCSLDVSASSR-MVVTGDNVGNVILLNMDGKE----LWNLRMHKKKVTHVA 257 (435)
T ss_dssp SCEEEEETTSCE----EEEEECCSSCSCCCCCEEEETTTT-EEEEECSSSBEEEEESSSCB----CCCSBCCSSCEEEEE
T ss_pred CEEEEeeccCCc----eeEEeccCCCCccEEEEEECCCCC-EEEEEeCCCcEeeeccCcce----eEEEecccceEEeee
Confidence 999999997541 111222223445688999999986 66799999999999997533 456678999999999
Q ss_pred ecCCCCeEEEEEeCCCcEEEEECCCCCC--cceeecCCCCCEEEEEEcCCCCcEEEEEeCCCeEEEeeCCCCCcccCCCc
Q 014472 281 FNPFNEWILATGSTDKTVKLFDLRKIST--ALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPED 358 (424)
Q Consensus 281 ~~~~~~~~l~~g~~dg~i~iwd~~~~~~--~~~~~~~~~~~v~~~~~sp~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~ 358 (424)
|+|+++.+|++|+.|+.|++||+++... .+....+|...|++++|+|++. +|++++.||.|+|||+..+........
T Consensus 258 ~~p~~~~~~~s~s~d~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~spdg~-~l~s~~~D~~i~iwd~~~~~~~~~~~~ 336 (435)
T 4e54_B 258 LNPCCDWFLATASVDQTVKIWDLRQVRGKASFLYSLPHRHPVNAACFSPDGA-RLLTTDQKSEIRVYSASQWDCPLGLIP 336 (435)
T ss_dssp ECTTCSSEEEEEETTSBCCEEETTTCCSSSCCSBCCBCSSCEEECCBCTTSS-EEEEEESSSCEEEEESSSSSSEEEECC
T ss_pred ecCCCceEEEEecCcceeeEEecccccccceEEEeeeccccccceeECCCCC-eeEEEcCCCEEEEEECCCCccceEEec
Confidence 9999988899999999999999987432 2334457999999999999996 799999999999999987543210000
Q ss_pred ---------------------------cC----------C---------CCCeeeEE-EcCCCCCcceE-EeCCCCCcEE
Q 014472 359 ---------------------------AE----------D---------GPPELLFI-HGGHTSKISDF-SWNPCEDWVI 390 (424)
Q Consensus 359 ---------------------------~~----------~---------~~~~~~~~-~~~h~~~v~~~-~~~~~~~~~l 390 (424)
.. + ....++.. ..+|...|.++ +|+|+|. +|
T Consensus 337 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~i~iwd~~~g~~~~~l~~~~~~~v~s~~~fspdg~-~l 415 (435)
T 4e54_B 337 HPHRHFQHLTPIKAAWHPRYNLIVVGRYPDPNFKSCTPYELRTIDVFDGNSGKMMCQLYDPESSGISSLNEFNPMGD-TL 415 (435)
T ss_dssp CCCCCCSSSCCCBCEECSSSSCEEEECCCCTTSCCSSTTCCCCEEEECSSSCCEEEEECCSSCCCCCCEEEECTTSS-CE
T ss_pred ccccccccceeEEEEEcCCCCEEEEEEcCCCCeEEEEecCCCEEEEEECCCCcEEEEEeCCCCCcEEEEEEECCCCC-EE
Confidence 00 0 00112222 34677788887 6999999 58
Q ss_pred EEEeCCCcEEEEecCCCCC
Q 014472 391 SSVAEDNILQIWQMAENIY 409 (424)
Q Consensus 391 ~s~~~d~~i~iw~~~~~~~ 409 (424)
++|+ |+.|+||++.++..
T Consensus 416 asg~-d~~i~iW~~~~gk~ 433 (435)
T 4e54_B 416 ASAM-GYHILIWSQQEART 433 (435)
T ss_dssp EEEC-SSEEEECCCC----
T ss_pred EEEc-CCcEEEEECCcCee
Confidence 8766 88999999998754
No 31
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=100.00 E-value=8e-37 Score=279.62 Aligned_cols=275 Identities=19% Similarity=0.315 Sum_probs=212.4
Q ss_pred CcEEEEEEe-ccCCceeEEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCCeeeEEecCCCCc
Q 014472 114 GKVQIIQQI-NHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEG 192 (424)
Q Consensus 114 ~~~~~~~~~-~h~~~v~~i~~~p~~~~~latg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~ 192 (424)
.++++..++ +|.+.|++|+|+|+++.+||||+.||+|+|||+...... ...+...+.+|...|.+++|+|++.
T Consensus 26 ~~~~l~~tL~GH~~~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~-----~~~~~~~l~~h~~~V~~~~~s~dg~- 99 (340)
T 4aow_A 26 EQMTLRGTLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETN-----YGIPQRALRGHSHFVSDVVISSDGQ- 99 (340)
T ss_dssp CEEEEEEEECCCSSCEEEEEECTTCTTEEEEEETTSCEEEEEECCSSSC-----SEEEEEEECCCSSCEEEEEECTTSS-
T ss_pred CceEEEEEECCccCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCcc-----cceeeEEEeCCCCCEEEEEECCCCC-
Confidence 345555444 799999999999987679999999999999999863211 1234567889999999999999887
Q ss_pred eEEEEeCCCcEEEEeCCCCCCCC-------------------------------------cccceeeeecCCcceeeEEe
Q 014472 193 HLLSGSDDAQICLWDINAAPKNK-------------------------------------SLEAMQIFKVHEGVVEDVAW 235 (424)
Q Consensus 193 ~l~s~~~dg~i~vwd~~~~~~~~-------------------------------------~~~~~~~~~~~~~~v~~i~~ 235 (424)
+|++|+.|+.|++|+........ .........+|...+..++|
T Consensus 100 ~l~s~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~~~~~d~~~~~~~~~~~~~~~~~v~~~~~ 179 (340)
T 4aow_A 100 FALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRF 179 (340)
T ss_dssp EEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSSCSSCEEEEEE
T ss_pred EEEEEcccccceEEeecccceeeeecCCCCceeEEEEeecCccceeecCCCeEEEEEeCCCceEEEEeccccCcccceEE
Confidence 79999999999999987642110 00112223467888999999
Q ss_pred eCCCC-cEEEEEeCCCeEEEEECCCCCCCCCeeEecccCCCeeEEEecCCCCeEEEEEeCCCcEEEEECCCCCCcceeec
Q 014472 236 HLRHE-YLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATGSTDKTVKLFDLRKISTALHTFD 314 (424)
Q Consensus 236 ~~~~~-~~~~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~ 314 (424)
++++. .++++++.|+.|++||+++... +..+.+|...|++++|+|++. +|++|+.||.|++||+++ ..++..+.
T Consensus 180 ~~~~~~~~~~s~~~d~~i~i~d~~~~~~---~~~~~~h~~~v~~~~~s~~~~-~l~s~s~Dg~i~iwd~~~-~~~~~~~~ 254 (340)
T 4aow_A 180 SPNSSNPIIVSCGWDKLVKVWNLANCKL---KTNHIGHTGYLNTVTVSPDGS-LCASGGKDGQAMLWDLNE-GKHLYTLD 254 (340)
T ss_dssp CSCSSSCEEEEEETTSCEEEEETTTTEE---EEEECCCSSCEEEEEECTTSS-EEEEEETTCEEEEEETTT-TEEEEEEE
T ss_pred ccCCCCcEEEEEcCCCEEEEEECCCCce---eeEecCCCCcEEEEEECCCCC-EEEEEeCCCeEEEEEecc-Cceeeeec
Confidence 88754 4677999999999999998654 677788999999999999998 699999999999999998 66777776
Q ss_pred CCCCCEEEEEEcCCCCcEEEEEeCCCeEEEeeCCCCCcccCCCccCCCCCeeeEEEcCCCCCcceEEeCCCCCcEEEEEe
Q 014472 315 SHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPEDAEDGPPELLFIHGGHTSKISDFSWNPCEDWVISSVA 394 (424)
Q Consensus 315 ~~~~~v~~~~~sp~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~ 394 (424)
. ...|.+++|+|++. +++++.|+.|++||++......... .........+|...|++++|+|+++ +|++|+
T Consensus 255 ~-~~~v~~~~~~~~~~--~~~~~~d~~i~iwd~~~~~~~~~~~-----~~~~~~~~~~h~~~v~~l~~s~dg~-~l~sgs 325 (340)
T 4aow_A 255 G-GDIINALCFSPNRY--WLCAATGPSIKIWDLEGKIIVDELK-----QEVISTSSKAEPPQCTSLAWSADGQ-TLFAGY 325 (340)
T ss_dssp C-SSCEEEEEECSSSS--EEEEEETTEEEEEETTTTEEEEEEC-----CC-------CCCCCEEEEEECTTSS-EEEEEE
T ss_pred C-CceEEeeecCCCCc--eeeccCCCEEEEEECCCCeEEEecc-----ccceeeeccCCCCCEEEEEECCCCC-EEEEEe
Confidence 5 56899999999874 5567779999999998753221110 1122334467889999999999999 699999
Q ss_pred CCCcEEEEecCCCC
Q 014472 395 EDNILQIWQMAENI 408 (424)
Q Consensus 395 ~d~~i~iw~~~~~~ 408 (424)
.||.|+||++.+|.
T Consensus 326 ~Dg~v~iW~~~tGt 339 (340)
T 4aow_A 326 TDNLVRVWQVTIGT 339 (340)
T ss_dssp TTSCEEEEEEEC--
T ss_pred CCCEEEEEeCCCcC
Confidence 99999999998873
No 32
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=100.00 E-value=2.7e-36 Score=277.85 Aligned_cols=308 Identities=16% Similarity=0.283 Sum_probs=234.4
Q ss_pred CCCccEEEEccCCCCCCCCCCceEEEEEeecCCCCCCCeEEEEEEEcCCCCCCcccCCCCCcCCCCCCCCCCCCcEEEEE
Q 014472 41 EWPSLTVEWLPDREEPPGKDYSVQKMILGTHTSENEPNYLMLAQVQLPLDDSENDARHYDDDRSDFGGFGCANGKVQIIQ 120 (424)
Q Consensus 41 ~~p~~~~~~~p~~~~~~~~~~~~~~~~~gt~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 120 (424)
.-+..+++|.|+.. ..++.|+ ....+..++++.+. .++.....
T Consensus 18 ~~~v~~~~~~p~~~---------~l~~~~s--~~~~d~~v~iw~~~--------------------------~~~~~~~~ 60 (357)
T 3i2n_A 18 NYTVFDCKWVPCSA---------KFVTMGN--FARGTGVIQLYEIQ--------------------------HGDLKLLR 60 (357)
T ss_dssp SSCEEEEEECTTSS---------EEEEEEC----CCCEEEEEEEEC--------------------------SSSEEEEE
T ss_pred CCceEEEEEcCCCc---------eEEEecC--ccCCCcEEEEEeCC--------------------------CCccccee
Confidence 34578999999762 2233333 11235678888773 22344555
Q ss_pred EeccCCceeEEEecCCC--CcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCCeeeEEe------cCCCCc
Q 014472 121 QINHDGEVNRARYMPQN--PFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSW------SKFKEG 192 (424)
Q Consensus 121 ~~~h~~~v~~i~~~p~~--~~~latg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~------~~~~~~ 192 (424)
...|...|.+++|+|++ ..+|++|+.||.|++||+... ..+...+.+|...|.+++| +|++.
T Consensus 61 ~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~---------~~~~~~~~~~~~~v~~~~~~~~~~~s~~~~- 130 (357)
T 3i2n_A 61 EIEKAKPIKCGTFGATSLQQRYLATGDFGGNLHIWNLEAP---------EMPVYSVKGHKEIINAIDGIGGLGIGEGAP- 130 (357)
T ss_dssp EEEESSCEEEEECTTCCTTTCCEEEEETTSCEEEECTTSC---------SSCSEEECCCSSCEEEEEEESGGGCC-CCC-
T ss_pred eecccCcEEEEEEcCCCCCCceEEEecCCCeEEEEeCCCC---------CccEEEEEecccceEEEeeccccccCCCcc-
Confidence 66899999999999984 348999999999999999871 1257788899999999955 66676
Q ss_pred eEEEEeCCCcEEEEeCCCCCCCCcccceeeeecCC----cceeeEE----eeCCCCcEEEEEeCCCeEEEEECCCCCCCC
Q 014472 193 HLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHE----GVVEDVA----WHLRHEYLFGSVGDDQYLLIWDLRTPSVSK 264 (424)
Q Consensus 193 ~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~----~~v~~i~----~~~~~~~~~~s~~~dg~i~i~d~~~~~~~~ 264 (424)
+|++++.||.|++||+..+.. ....+..|. ..+.+++ |+|++. ++++++.||.|++||++++..
T Consensus 131 ~l~~~~~d~~i~vwd~~~~~~-----~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~-- 202 (357)
T 3i2n_A 131 EIVTGSRDGTVKVWDPRQKDD-----PVANMEPVQGENKRDCWTVAFGNAYNQEER-VVCAGYDNGDIKLFDLRNMAL-- 202 (357)
T ss_dssp EEEEEETTSCEEEECTTSCSS-----CSEEECCCTTSCCCCEEEEEEECCCC-CCC-EEEEEETTSEEEEEETTTTEE--
T ss_pred EEEEEeCCCeEEEEeCCCCCC-----cceeccccCCCCCCceEEEEEEeccCCCCC-EEEEEccCCeEEEEECccCce--
Confidence 799999999999999987642 223333333 3788888 677776 667999999999999998663
Q ss_pred CeeEecccCCCeeEEEecC---CCCeEEEEEeCCCcEEEEECCCCCCcceeec-----CCCCCEEEEEEcCCCCcEEEEE
Q 014472 265 PVQSVVAHQSEVNCLAFNP---FNEWILATGSTDKTVKLFDLRKISTALHTFD-----SHKEEVFQVGWNPKNETILASC 336 (424)
Q Consensus 265 ~~~~~~~~~~~v~~i~~~~---~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~-----~~~~~v~~~~~sp~~~~~l~s~ 336 (424)
.....|...|.+++|+| ++. +|++|+.||.|++||++. ..++..+. .|...|++++|+|+++.+|+++
T Consensus 203 --~~~~~~~~~v~~~~~~~~~~~~~-~l~~~~~dg~i~i~d~~~-~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~ 278 (357)
T 3i2n_A 203 --RWETNIKNGVCSLEFDRKDISMN-KLVATSLEGKFHVFDMRT-QHPTKGFASVSEKAHKSTVWQVRHLPQNRELFLTA 278 (357)
T ss_dssp --EEEEECSSCEEEEEESCSSSSCC-EEEEEESTTEEEEEEEEE-EETTTEEEEEEEECCSSCEEEEEEETTEEEEEEEE
T ss_pred --eeecCCCCceEEEEcCCCCCCCC-EEEEECCCCeEEEEeCcC-CCcccceeeeccCCCcCCEEEEEECCCCCcEEEEE
Confidence 34457889999999999 777 689999999999999987 55555554 8999999999999996689999
Q ss_pred eCCCeEEEeeCCCCCcccCCCcc-----CCCCCeeeEEEcCCCCCcceEEeCCCCCcEEEEEeCCCcEEEEecCCC
Q 014472 337 CLGRRLMVWDLSRIDEEQTPEDA-----EDGPPELLFIHGGHTSKISDFSWNPCEDWVISSVAEDNILQIWQMAEN 407 (424)
Q Consensus 337 ~~dg~i~iwd~~~~~~~~~~~~~-----~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iw~~~~~ 407 (424)
+.||.|++||++........... ..+...++..+.+|...|++++|+|++++++++++.|+.|+||++.+.
T Consensus 279 ~~dg~i~iwd~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~s~~~d~~i~iw~~~~~ 354 (357)
T 3i2n_A 279 GGAGGLHLWKYEYPIQRSKKDSEGIEMGVAGSVSLLQNVTLSTQPISSLDWSPDKRGLCVCSSFDQTVRVLIVTKL 354 (357)
T ss_dssp ETTSEEEEEEEECCSCC--CCTTSCCCCCCCEEEEEEEEECCSSCEEEEEECSSSTTEEEEEETTSEEEEEEECC-
T ss_pred eCCCcEEEeecCCCcccccccCCCCccccccccceeeccccCCCCeeEEEEcCCCCeEEEEecCCCcEEEEECCCc
Confidence 99999999999875533211110 011225678889999999999999999965558999999999999764
No 33
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.5e-38 Score=297.97 Aligned_cols=337 Identities=14% Similarity=0.253 Sum_probs=243.0
Q ss_pred HHhHHhcChhHHHHhhhcCCCCCccEEEEccCCCCCCCCCCceEEEEEeecCCCCCCCeEEEEEEEcCCCCCCcccCCCC
Q 014472 21 YKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEPPGKDYSVQKMILGTHTSENEPNYLMLAQVQLPLDDSENDARHYD 100 (424)
Q Consensus 21 ~~~wk~~~~~~y~~~~~~~~~~p~~~~~~~p~~~~~~~~~~~~~~~~~gt~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~ 100 (424)
.++|..........+......-+..++.|.|+. ..++.|+ .+..++++.+.-.
T Consensus 47 v~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~----------~~l~~~~-----~dg~v~vw~~~~~------------ 99 (416)
T 2pm9_A 47 LELWSLLAADSEKPIASLQVDSKFNDLDWSHNN----------KIIAGAL-----DNGSLELYSTNEA------------ 99 (416)
T ss_dssp CEEEESSSGGGCSCSCCCCCSSCEEEEEECSSS----------SCEEEEE-----SSSCEEEECCSST------------
T ss_pred EEEEEccCCCCCcEEEEEecCCceEEEEECCCC----------CeEEEEc-----cCCeEEEeecccc------------
Confidence 455544433222222333344557788898865 3455555 2345777655211
Q ss_pred CcCCCCCCCCCCCCcEEEEEEeccCCceeEEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCC
Q 014472 101 DDRSDFGGFGCANGKVQIIQQINHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTE 180 (424)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~~p~~~~~latg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~h~~~ 180 (424)
..+.-.+.....|.+.|++++|+|++..+|++|+.||.|++||+.......... .......+..|...
T Consensus 100 -----------~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~-~~~~~~~~~~~~~~ 167 (416)
T 2pm9_A 100 -----------NNAINSMARFSNHSSSVKTVKFNAKQDNVLASGGNNGEIFIWDMNKCTESPSNY-TPLTPGQSMSSVDE 167 (416)
T ss_dssp -----------TSCCCEEEECCCSSSCCCEEEECSSSTTBEEEECSSSCEEBCBTTTTSSCTTTC-CCBCCCCSCCSSCC
T ss_pred -----------cccccchhhccCCccceEEEEEcCCCCCEEEEEcCCCeEEEEECCCCccccccc-cccccccccCCCCC
Confidence 001112334457999999999999855689999999999999998732110000 01112234679999
Q ss_pred eeeEEecCCCCceEEEEeCCCcEEEEeCCCCCCCCcccceeeeecC------CcceeeEEeeCCCCcEEEEEeCCC---e
Q 014472 181 GYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVH------EGVVEDVAWHLRHEYLFGSVGDDQ---Y 251 (424)
Q Consensus 181 v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~------~~~v~~i~~~~~~~~~~~s~~~dg---~ 251 (424)
|.+++|+|++..+|++++.||.|++||++++. .+..+..+ ...|.+++|+|++..++++++.|+ .
T Consensus 168 v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~------~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~ 241 (416)
T 2pm9_A 168 VISLAWNQSLAHVFASAGSSNFASIWDLKAKK------EVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDNDPS 241 (416)
T ss_dssp CCEEEECSSCTTEEEEESSSSCEEEEETTTTE------EEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSSCC
T ss_pred eeEEEeCCCCCcEEEEEcCCCCEEEEECCCCC------cceEEeccccccccCCceEEEEECCCCCCEEEEEECCCCCce
Confidence 99999999866689999999999999998763 33334434 789999999999877888999998 9
Q ss_pred EEEEECCCCCCCCCeeEec-ccCCCeeEEEecC-CCCeEEEEEeCCCcEEEEECCCCCCcceeecCCCCCEEEEEEcCCC
Q 014472 252 LLIWDLRTPSVSKPVQSVV-AHQSEVNCLAFNP-FNEWILATGSTDKTVKLFDLRKISTALHTFDSHKEEVFQVGWNPKN 329 (424)
Q Consensus 252 i~i~d~~~~~~~~~~~~~~-~~~~~v~~i~~~~-~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~sp~~ 329 (424)
|++||+++... ++..+. .|...|++++|+| ++. +|++++.||.|++||+++ ++++..+..|...|.+++|+|++
T Consensus 242 i~~~d~~~~~~--~~~~~~~~~~~~v~~~~~s~~~~~-~l~s~~~dg~v~~wd~~~-~~~~~~~~~~~~~v~~~~~s~~~ 317 (416)
T 2pm9_A 242 ILIWDLRNANT--PLQTLNQGHQKGILSLDWCHQDEH-LLLSSGRDNTVLLWNPES-AEQLSQFPARGNWCFKTKFAPEA 317 (416)
T ss_dssp CCEEETTSTTS--CSBCCCSCCSSCEEEEEECSSCSS-CEEEEESSSEEEEECSSS-CCEEEEEECSSSCCCCEEECTTC
T ss_pred EEEEeCCCCCC--CcEEeecCccCceeEEEeCCCCCC-eEEEEeCCCCEEEeeCCC-CccceeecCCCCceEEEEECCCC
Confidence 99999998642 355666 7999999999999 665 699999999999999998 78889999999999999999998
Q ss_pred CcEEEEEeCCCeEEEeeCCCCCcccCCCc---cCCCCCeeeEEEcC------------------CCCCcceEEeCCCCCc
Q 014472 330 ETILASCCLGRRLMVWDLSRIDEEQTPED---AEDGPPELLFIHGG------------------HTSKISDFSWNPCEDW 388 (424)
Q Consensus 330 ~~~l~s~~~dg~i~iwd~~~~~~~~~~~~---~~~~~~~~~~~~~~------------------h~~~v~~~~~~~~~~~ 388 (424)
+.+|++++.|+.|++|++........... ....++..++...+ |...+.+++|+|+|+
T Consensus 318 ~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~- 396 (416)
T 2pm9_A 318 PDLFACASFDNKIEVQTLQNLTNTLDEQETETKQQESETDFWNNVSREESKEKPSVFHLQAPTWYGEPSPAAHWAFGGK- 396 (416)
T ss_dssp TTEEEECCSSSEEEEEESCCCCCSSCC----------------------CCSCCCSSCCCCCSTTCCCSCCCEEETTTE-
T ss_pred CCEEEEEecCCcEEEEEccCCCCCcccccccccccCCcccccccccccccccccccccccCCccccCCccceEEeeCCe-
Confidence 66899999999999999988765443211 11122222232222 677888999999999
Q ss_pred EEEEEeCCCcEEEEecCCC
Q 014472 389 VISSVAEDNILQIWQMAEN 407 (424)
Q Consensus 389 ~l~s~~~d~~i~iw~~~~~ 407 (424)
+|++++.|+.|+||++.++
T Consensus 397 ~la~~~~d~~v~~w~~~~~ 415 (416)
T 2pm9_A 397 LVQITPDGKGVSITNPKIS 415 (416)
T ss_dssp EECBCTTSSCBCCBCCCCC
T ss_pred EEEEeCCCCeEEEEEeccC
Confidence 7999999999999999864
No 34
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=1.6e-36 Score=283.62 Aligned_cols=263 Identities=20% Similarity=0.327 Sum_probs=207.2
Q ss_pred EEEEEEeccCCceeEEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEecC------------------
Q 014472 116 VQIIQQINHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGH------------------ 177 (424)
Q Consensus 116 ~~~~~~~~h~~~v~~i~~~p~~~~~latg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~h------------------ 177 (424)
.++.+.+.|.+.|++++|+|++. +||+|+ ++.++||++... .....+..|
T Consensus 55 ~~~~~~~~h~~~V~~v~fspdg~-~la~g~-~~~v~i~~~~~g----------~~~~~l~~~~~~~~~~~~~~~~~~~~~ 122 (393)
T 1erj_A 55 VELHKSLDHTSVVCCVKFSNDGE-YLATGC-NKTTQVYRVSDG----------SLVARLSDDSAANKDPENLNTSSSPSS 122 (393)
T ss_dssp EEEEEEEECSSCCCEEEECTTSS-EEEEEC-BSCEEEEETTTC----------CEEEEECC-----------------CC
T ss_pred ceeEEecCCCCEEEEEEECCCCC-EEEEEc-CCcEEEEEecCC----------CEEEEecCccccccccccccccccCCC
Confidence 44566678999999999999997 788876 689999998762 222333322
Q ss_pred CCCeeeEEecCCCCceEEEEeCCCcEEEEeCCCCCCCCcccceeeeecCCcceeeEEeeCCCCcEEEEEeCCCeEEEEEC
Q 014472 178 STEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDL 257 (424)
Q Consensus 178 ~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~~s~~~dg~i~i~d~ 257 (424)
...|.+++|+|++. +|++|+.||.|++||+.++ +.+..+.+|...|.+++|+|++. .|++++.|++|++||+
T Consensus 123 ~~~v~~v~~s~dg~-~l~s~~~d~~i~iwd~~~~------~~~~~~~~h~~~v~~~~~~p~~~-~l~s~s~d~~v~iwd~ 194 (393)
T 1erj_A 123 DLYIRSVCFSPDGK-FLATGAEDRLIRIWDIENR------KIVMILQGHEQDIYSLDYFPSGD-KLVSGSGDRTVRIWDL 194 (393)
T ss_dssp CCBEEEEEECTTSS-EEEEEETTSCEEEEETTTT------EEEEEECCCSSCEEEEEECTTSS-EEEEEETTSEEEEEET
T ss_pred ceeEEEEEECCCCC-EEEEEcCCCeEEEEECCCC------cEEEEEccCCCCEEEEEEcCCCC-EEEEecCCCcEEEEEC
Confidence 23489999999887 7999999999999999765 34566788999999999999987 5569999999999999
Q ss_pred CCCCCCCCeeEecccCCCeeEEEecC-CCCeEEEEEeCCCcEEEEECCCCCCcceee-------cCCCCCEEEEEEcCCC
Q 014472 258 RTPSVSKPVQSVVAHQSEVNCLAFNP-FNEWILATGSTDKTVKLFDLRKISTALHTF-------DSHKEEVFQVGWNPKN 329 (424)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~v~~i~~~~-~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~-------~~~~~~v~~~~~sp~~ 329 (424)
++++. ...+ .+...+.+++|+| ++. +|++|+.||.|++||+++ +..+..+ .+|...|.+++|+|++
T Consensus 195 ~~~~~---~~~~-~~~~~v~~~~~~~~~~~-~l~~~s~d~~v~iwd~~~-~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g 268 (393)
T 1erj_A 195 RTGQC---SLTL-SIEDGVTTVAVSPGDGK-YIAAGSLDRAVRVWDSET-GFLVERLDSENESGTGHKDSVYSVVFTRDG 268 (393)
T ss_dssp TTTEE---EEEE-ECSSCEEEEEECSTTCC-EEEEEETTSCEEEEETTT-CCEEEEEC------CCCSSCEEEEEECTTS
T ss_pred CCCee---EEEE-EcCCCcEEEEEECCCCC-EEEEEcCCCcEEEEECCC-CcEEEeecccccCCCCCCCCEEEEEECCCC
Confidence 98653 3333 3567899999999 555 799999999999999997 5555555 5789999999999999
Q ss_pred CcEEEEEeCCCeEEEeeCCCCCcccCCCccCCCCCeeeEEEcCCCCCcceEEeCCCCCcEEEEEeCCCcEEEEecCCCC
Q 014472 330 ETILASCCLGRRLMVWDLSRIDEEQTPEDAEDGPPELLFIHGGHTSKISDFSWNPCEDWVISSVAEDNILQIWQMAENI 408 (424)
Q Consensus 330 ~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~ 408 (424)
. +|++++.|+.|++||++.......... .....+...+.+|...|.+++|+|++. +|++++.|+.|++||+.++.
T Consensus 269 ~-~l~s~s~d~~v~~wd~~~~~~~~~~~~--~~~~~~~~~~~~h~~~v~~~~~~~~~~-~l~sgs~D~~v~iwd~~~~~ 343 (393)
T 1erj_A 269 Q-SVVSGSLDRSVKLWNLQNANNKSDSKT--PNSGTCEVTYIGHKDFVLSVATTQNDE-YILSGSKDRGVLFWDKKSGN 343 (393)
T ss_dssp S-EEEEEETTSEEEEEEC-----------------CEEEEEECCSSCEEEEEECGGGC-EEEEEETTSEEEEEETTTCC
T ss_pred C-EEEEEeCCCEEEEEECCCCCCcccccC--CCCCcceEEEecccCcEEEEEECCCCC-EEEEEeCCCeEEEEECCCCe
Confidence 6 799999999999999987543221110 011245567789999999999999999 69999999999999998764
No 35
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=1.7e-36 Score=283.46 Aligned_cols=245 Identities=22% Similarity=0.356 Sum_probs=205.7
Q ss_pred ccCCceeEEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCCeeeEEecCCCCceEEEEeCCCc
Q 014472 123 NHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDDAQ 202 (424)
Q Consensus 123 ~h~~~v~~i~~~p~~~~~latg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~ 202 (424)
.+...|++++|+|++. +||+|+.||.|+|||+.. ......+.+|...|.+++|+|++. +|++|+.|++
T Consensus 121 ~~~~~v~~v~~s~dg~-~l~s~~~d~~i~iwd~~~----------~~~~~~~~~h~~~v~~~~~~p~~~-~l~s~s~d~~ 188 (393)
T 1erj_A 121 SSDLYIRSVCFSPDGK-FLATGAEDRLIRIWDIEN----------RKIVMILQGHEQDIYSLDYFPSGD-KLVSGSGDRT 188 (393)
T ss_dssp CCCCBEEEEEECTTSS-EEEEEETTSCEEEEETTT----------TEEEEEECCCSSCEEEEEECTTSS-EEEEEETTSE
T ss_pred CCceeEEEEEECCCCC-EEEEEcCCCeEEEEECCC----------CcEEEEEccCCCCEEEEEEcCCCC-EEEEecCCCc
Confidence 3455799999999987 899999999999999987 455677889999999999999887 7999999999
Q ss_pred EEEEeCCCCCCCCcccceeeeecCCcceeeEEeeCCCCcEEEEEeCCCeEEEEECCCCCCCCCeeEe-------cccCCC
Q 014472 203 ICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSV-------VAHQSE 275 (424)
Q Consensus 203 i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~~s~~~dg~i~i~d~~~~~~~~~~~~~-------~~~~~~ 275 (424)
|++||++++. ....+ .+...+.+++|+|....+|++|+.||.|++||++++.. +..+ .+|...
T Consensus 189 v~iwd~~~~~------~~~~~-~~~~~v~~~~~~~~~~~~l~~~s~d~~v~iwd~~~~~~---~~~~~~~~~~~~~h~~~ 258 (393)
T 1erj_A 189 VRIWDLRTGQ------CSLTL-SIEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFL---VERLDSENESGTGHKDS 258 (393)
T ss_dssp EEEEETTTTE------EEEEE-ECSSCEEEEEECSTTCCEEEEEETTSCEEEEETTTCCE---EEEEC------CCCSSC
T ss_pred EEEEECCCCe------eEEEE-EcCCCcEEEEEECCCCCEEEEEcCCCcEEEEECCCCcE---EEeecccccCCCCCCCC
Confidence 9999998763 22223 35678999999994445778999999999999988653 3333 578899
Q ss_pred eeEEEecCCCCeEEEEEeCCCcEEEEECCCCC-----------CcceeecCCCCCEEEEEEcCCCCcEEEEEeCCCeEEE
Q 014472 276 VNCLAFNPFNEWILATGSTDKTVKLFDLRKIS-----------TALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMV 344 (424)
Q Consensus 276 v~~i~~~~~~~~~l~~g~~dg~i~iwd~~~~~-----------~~~~~~~~~~~~v~~~~~sp~~~~~l~s~~~dg~i~i 344 (424)
|++++|+|++. +|++|+.|+.|++||++... .+...+.+|...|.+++|+|++. +|++++.|+.|++
T Consensus 259 v~~v~~~~~g~-~l~s~s~d~~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~-~l~sgs~D~~v~i 336 (393)
T 1erj_A 259 VYSVVFTRDGQ-SVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDE-YILSGSKDRGVLF 336 (393)
T ss_dssp EEEEEECTTSS-EEEEEETTSEEEEEEC---------------CEEEEEECCSSCEEEEEECGGGC-EEEEEETTSEEEE
T ss_pred EEEEEECCCCC-EEEEEeCCCEEEEEECCCCCCcccccCCCCCcceEEEecccCcEEEEEECCCCC-EEEEEeCCCeEEE
Confidence 99999999998 68999999999999998632 23456778999999999999996 7999999999999
Q ss_pred eeCCCCCcccCCCccCCCCCeeeEEEcCCCCCcceEEeCC------CCCcEEEEEeCCCcEEEEecCC
Q 014472 345 WDLSRIDEEQTPEDAEDGPPELLFIHGGHTSKISDFSWNP------CEDWVISSVAEDNILQIWQMAE 406 (424)
Q Consensus 345 wd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~------~~~~~l~s~~~d~~i~iw~~~~ 406 (424)
||+.++ ..+..+.+|...|.+++|++ +++ +|+||+.||.|+||++..
T Consensus 337 wd~~~~--------------~~~~~l~~h~~~v~~v~~~~~~~~~p~~~-~l~sgs~Dg~i~iW~~~~ 389 (393)
T 1erj_A 337 WDKKSG--------------NPLLMLQGHRNSVISVAVANGSSLGPEYN-VFATGSGDCKARIWKYKK 389 (393)
T ss_dssp EETTTC--------------CEEEEEECCSSCEEEEEECSSCTTCTTCE-EEEEEETTSEEEEEEEEE
T ss_pred EECCCC--------------eEEEEECCCCCCEEEEEecCCcCcCCCCC-EEEEECCCCcEEECcccc
Confidence 999875 45677889999999999986 566 799999999999999864
No 36
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=100.00 E-value=1.1e-35 Score=292.09 Aligned_cols=239 Identities=26% Similarity=0.445 Sum_probs=210.8
Q ss_pred EEeccCCceeEEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCCeeeEEecCCCCceEEEEeC
Q 014472 120 QQINHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSD 199 (424)
Q Consensus 120 ~~~~h~~~v~~i~~~p~~~~~latg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~ 199 (424)
....|...|.+++|+|++. +||+|+.+|.|++|+... .....+.+|...|.+++|+|++. +|++++.
T Consensus 339 ~~~~~~~~v~~~~~s~~g~-~l~~~~~dg~v~~~~~~~-----------~~~~~~~~~~~~v~~~~~s~dg~-~l~~~~~ 405 (577)
T 2ymu_A 339 TLTGHSSSVWGVAFSPDGQ-TIASASDDKTVKLWNRNG-----------QLLQTLTGHSSSVRGVAFSPDGQ-TIASASD 405 (577)
T ss_dssp EECCCSSCEEEEEECTTSS-EEEEEETTSEEEEEETTC-----------CEEEEEECCSSCEEEEEECTTSS-CEEEEET
T ss_pred EEeCCCCCEEEEEECCCCC-EEEEEeCCCEEEEEcCCC-----------CEEEEecCCCCCeEEEEECCCCC-EEEEEeC
Confidence 3457899999999999987 899999999999999654 45677889999999999999988 7999999
Q ss_pred CCcEEEEeCCCCCCCCcccceeeeecCCcceeeEEeeCCCCcEEEEEeCCCeEEEEECCCCCCCCCeeEecccCCCeeEE
Q 014472 200 DAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCL 279 (424)
Q Consensus 200 dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~i 279 (424)
|+.|++||... +.+..+.+|...|++++|+|++. ++++++.|+.|++||+.. +.+..+..|...|+++
T Consensus 406 d~~v~~~~~~~-------~~~~~~~~~~~~v~~~~~s~d~~-~l~~~~~d~~v~~w~~~~----~~~~~~~~~~~~v~~~ 473 (577)
T 2ymu_A 406 DKTVKLWNRNG-------QLLQTLTGHSSSVWGVAFSPDDQ-TIASASDDKTVKLWNRNG----QLLQTLTGHSSSVRGV 473 (577)
T ss_dssp TSEEEEECTTC-------CEEEEEECCSSCEEEEEECTTSS-EEEEEETTSEEEEEETTS----CEEEEEECCSSCEEEE
T ss_pred CCEEEEEeCCC-------CEEEEecCCCCCeEEEEECCCCC-EEEEEcCCCEEEEEECCC----CEEEEEcCCCCCEEEE
Confidence 99999999642 24566788999999999999987 567999999999999743 2367778899999999
Q ss_pred EecCCCCeEEEEEeCCCcEEEEECCCCCCcceeecCCCCCEEEEEEcCCCCcEEEEEeCCCeEEEeeCCCCCcccCCCcc
Q 014472 280 AFNPFNEWILATGSTDKTVKLFDLRKISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPEDA 359 (424)
Q Consensus 280 ~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~ 359 (424)
+|+|++. +|++++.|+.|++||.. ++++..+.+|...|++++|+|+++ +|++++.||.|+|||...
T Consensus 474 ~~spd~~-~las~~~d~~i~iw~~~--~~~~~~~~~h~~~v~~l~~s~dg~-~l~s~~~dg~v~lwd~~~---------- 539 (577)
T 2ymu_A 474 AFSPDGQ-TIASASDDKTVKLWNRN--GQLLQTLTGHSSSVRGVAFSPDGQ-TIASASDDKTVKLWNRNG---------- 539 (577)
T ss_dssp EECTTSC-EEEEEETTSEEEEEETT--SCEEEEEECCSSCEEEEEECTTSS-CEEEEETTSEEEEECTTS----------
T ss_pred EEcCCCC-EEEEEeCCCEEEEEcCC--CCEEEEEeCCCCCEEEEEEcCCCC-EEEEEECcCEEEEEeCCC----------
Confidence 9999998 69999999999999964 578889999999999999999996 699999999999999643
Q ss_pred CCCCCeeeEEEcCCCCCcceEEeCCCCCcEEEEEeCCCcEEEEe
Q 014472 360 EDGPPELLFIHGGHTSKISDFSWNPCEDWVISSVAEDNILQIWQ 403 (424)
Q Consensus 360 ~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iw~ 403 (424)
+++..+.+|...|++++|+|+++ +|+|++.|++|++||
T Consensus 540 -----~~~~~~~~h~~~v~~~~fs~dg~-~l~s~~~D~~i~~Wd 577 (577)
T 2ymu_A 540 -----QLLQTLTGHSSSVWGVAFSPDGQ-TIASASSDKTVKLWN 577 (577)
T ss_dssp -----CEEEEEECCSSCEEEEEECTTSS-CEEEEETTSCEEEEC
T ss_pred -----CEEEEEcCCCCCEEEEEEcCCCC-EEEEEeCCCEEEEeC
Confidence 56778889999999999999999 588999999999997
No 37
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=100.00 E-value=2.2e-36 Score=279.37 Aligned_cols=252 Identities=19% Similarity=0.288 Sum_probs=206.0
Q ss_pred ccCCceeEEEecCCCC---cEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCCeeeEEecCCCCceEEEEeC
Q 014472 123 NHDGEVNRARYMPQNP---FLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSD 199 (424)
Q Consensus 123 ~h~~~v~~i~~~p~~~---~~latg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~ 199 (424)
.|.+.|++++|+|++. .+|++|+.||.|++||+.+ ......+.+|...|.+++|+|.+..+|++|+.
T Consensus 67 ~~~~~v~~~~~~~~~~~~~~~l~~~~~dg~i~v~d~~~----------~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~ 136 (366)
T 3k26_A 67 DADENFYTCAWTYDSNTSHPLLAVAGSRGIIRIINPIT----------MQCIKHYVGHGNAINELKFHPRDPNLLLSVSK 136 (366)
T ss_dssp CTTCCEEEEEEEECTTTCCEEEEEEETTCEEEEECTTT----------CCEEEEEESCCSCEEEEEECSSCTTEEEEEET
T ss_pred CCCCcEEEEEeccCCCCCCCEEEEecCCCEEEEEEchh----------ceEeeeecCCCCcEEEEEECCCCCCEEEEEeC
Confidence 4789999999999832 4899999999999999987 45577788999999999999943348999999
Q ss_pred CCcEEEEeCCCCCCCCcccceeee---ecCCcceeeEEeeCCCCcEEEEEeCCCeEEEEECCCCCCC-------------
Q 014472 200 DAQICLWDINAAPKNKSLEAMQIF---KVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVS------------- 263 (424)
Q Consensus 200 dg~i~vwd~~~~~~~~~~~~~~~~---~~~~~~v~~i~~~~~~~~~~~s~~~dg~i~i~d~~~~~~~------------- 263 (424)
||.|++||++++. .+..+ ..|...|.+++|+|++. .|++++.||.|++||+++++..
T Consensus 137 dg~i~iwd~~~~~------~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~ 209 (366)
T 3k26_A 137 DHALRLWNIQTDT------LVAIFGGVEGHRDEVLSADYDLLGE-KIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNK 209 (366)
T ss_dssp TSCEEEEETTTTE------EEEEECSTTSCSSCEEEEEECTTSS-EEEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGG
T ss_pred CCeEEEEEeecCe------EEEEecccccccCceeEEEECCCCC-EEEEecCCCCEEEEECCCCccccccceeEEecCCC
Confidence 9999999998762 33334 67999999999999886 5679999999999999875321
Q ss_pred ------------CCeeEecccCCCeeEEEecCCCCeEEEEEeCCCcEEEEECCCCCC-------------cceeecCCCC
Q 014472 264 ------------KPVQSVVAHQSEVNCLAFNPFNEWILATGSTDKTVKLFDLRKIST-------------ALHTFDSHKE 318 (424)
Q Consensus 264 ------------~~~~~~~~~~~~v~~i~~~~~~~~~l~~g~~dg~i~iwd~~~~~~-------------~~~~~~~~~~ 318 (424)
........|...|.+++|+ +. +|++++.||.|++||+++... .+..+..|..
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~-~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (366)
T 3k26_A 210 TNRPFISQKIHFPDFSTRDIHRNYVDCVRWL--GD-LILSKSCENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQC 286 (366)
T ss_dssp CSSCCCCEEECCCSEEECSSCSSCCCEEEEE--TT-EEEEECSSSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSSC
T ss_pred CcccccceeeccCccccccCCcceEEEEEEc--CC-EEEEEecCCEEEEEeCCCccccccccccCCcchheeccccccCC
Confidence 0112223489999999999 55 799999999999999987432 2667778999
Q ss_pred CEEEEEEcCC--CCcEEEEEeCCCeEEEeeCCCCCcccCCCccCCCCCeeeEEEcCC--CCCcceEEeCCCCCcEEEEEe
Q 014472 319 EVFQVGWNPK--NETILASCCLGRRLMVWDLSRIDEEQTPEDAEDGPPELLFIHGGH--TSKISDFSWNPCEDWVISSVA 394 (424)
Q Consensus 319 ~v~~~~~sp~--~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h--~~~v~~~~~~~~~~~~l~s~~ 394 (424)
.|++++|+|+ +. +|++++.||.|++||+..+.... .....+.+| ...|++++|+|+++ +|++++
T Consensus 287 ~v~~~~~s~~~~~~-~l~~~~~dg~i~vwd~~~~~~~~----------~~~~~~~~~~~~~~v~~~~~s~~~~-~l~s~~ 354 (366)
T 3k26_A 287 DIWYMRFSMDFWQK-MLALGNQVGKLYVWDLEVEDPHK----------AKCTTLTHHKCGAAIRQTSFSRDSS-ILIAVC 354 (366)
T ss_dssp CSSCCCCEECTTSS-EEEEECTTSCEEEEECCSSSGGG----------CEEEEECCTTCCSCEEEEEECTTSS-EEEEEE
T ss_pred cEEEEEEcCCCCCc-EEEEEecCCcEEEEECCCCCCcc----------ccceEEcccccCCceEEEEeCCCCC-eEEEEe
Confidence 9999999999 75 89999999999999998764321 244566777 78999999999999 799999
Q ss_pred CCCcEEEEecCC
Q 014472 395 EDNILQIWQMAE 406 (424)
Q Consensus 395 ~d~~i~iw~~~~ 406 (424)
.||.|++||+.+
T Consensus 355 ~dg~i~iwd~~~ 366 (366)
T 3k26_A 355 DDASIWRWDRLR 366 (366)
T ss_dssp TTSEEEEEEC--
T ss_pred CCCEEEEEEecC
Confidence 999999999863
No 38
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=9e-36 Score=273.39 Aligned_cols=257 Identities=18% Similarity=0.272 Sum_probs=203.4
Q ss_pred EeccCCceeEEEe-----cC-CCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCCeeeEEecCCCCceE
Q 014472 121 QINHDGEVNRARY-----MP-QNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHL 194 (424)
Q Consensus 121 ~~~h~~~v~~i~~-----~p-~~~~~latg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l 194 (424)
..+|.+.|++++| ++ +++ +||+|+.|++|+|||+....... ....+...+.+|...|.+++|+|++. +|
T Consensus 17 l~gH~~~V~~~~~~~s~~~~~d~~-~l~sgs~D~~v~iWd~~~~~~~~---~~~~~~~~l~~h~~~V~~~~~~~~~~-~l 91 (343)
T 2xzm_R 17 LEGHSDWVTSIVAGFSQKENEDSP-VLISGSRDKTVMIWKLYEEEQNG---YFGIPHKALTGHNHFVSDLALSQENC-FA 91 (343)
T ss_dssp EECCSSCEEEEEECCCSSTTCCCC-EEEEEETTSCEEEEEECSSCCSS---BSEEEEEEECCCSSCEEEEEECSSTT-EE
T ss_pred eccchhhhhheeeEEEeecCCCCC-EEEEEcCCCEEEEEECCcCCccc---ccccccchhccCCCceEEEEECCCCC-EE
Confidence 3479999999999 76 554 89999999999999987521110 01234567889999999999999887 79
Q ss_pred EEEeCCCcEEEEeCCCCCCCCcccceeeeecCCcceeeEEeeCCCCcEEEEEeCCCeEEEEECCCCCCCCCeeEecccCC
Q 014472 195 LSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQS 274 (424)
Q Consensus 195 ~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~ 274 (424)
++|+.|++|++||++++ ..+..+.+|...|.+++|+|++. .+++++.|+.|++||++.... ........|..
T Consensus 92 ~s~s~D~~v~lwd~~~~------~~~~~~~~h~~~v~~v~~sp~~~-~l~s~~~d~~i~~wd~~~~~~-~~~~~~~~~~~ 163 (343)
T 2xzm_R 92 ISSSWDKTLRLWDLRTG------TTYKRFVGHQSEVYSVAFSPDNR-QILSAGAEREIKLWNILGECK-FSSAEKENHSD 163 (343)
T ss_dssp EEEETTSEEEEEETTSS------CEEEEEECCCSCEEEEEECSSTT-EEEEEETTSCEEEEESSSCEE-EECCTTTSCSS
T ss_pred EEEcCCCcEEEEECCCC------cEEEEEcCCCCcEEEEEECCCCC-EEEEEcCCCEEEEEeccCCce-eeeecccCCCc
Confidence 99999999999999876 34566788999999999999987 556999999999999974221 01111136888
Q ss_pred CeeEEEecCCCC---------eEEEEEeCCCcEEEEECCCCCCcceeecCCCCCEEEEEEcCCCCcEEEEEeCCCeEEEe
Q 014472 275 EVNCLAFNPFNE---------WILATGSTDKTVKLFDLRKISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVW 345 (424)
Q Consensus 275 ~v~~i~~~~~~~---------~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~s~~~dg~i~iw 345 (424)
.|.+++|+|.+. .+|++++.||.|++||.+ ......+.+|...|.+++|+|++. +|++++.||.|++|
T Consensus 164 ~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~--~~~~~~~~~h~~~v~~~~~s~~g~-~l~sgs~dg~v~iw 240 (343)
T 2xzm_R 164 WVSCVRYSPIMKSANKVQPFAPYFASVGWDGRLKVWNTN--FQIRYTFKAHESNVNHLSISPNGK-YIATGGKDKKLLIW 240 (343)
T ss_dssp CEEEEEECCCCCSCSCCCSSCCEEEEEETTSEEEEEETT--TEEEEEEECCSSCEEEEEECTTSS-EEEEEETTCEEEEE
T ss_pred eeeeeeeccccccccccCCCCCEEEEEcCCCEEEEEcCC--CceeEEEcCccccceEEEECCCCC-EEEEEcCCCeEEEE
Confidence 999999999862 379999999999999954 466778889999999999999996 79999999999999
Q ss_pred eCCCCCcccCCCccCCCCCeeeEEEcCCCCCcceEEeCCCCCcEEEEEeCCCcEEEEecCCCCC
Q 014472 346 DLSRIDEEQTPEDAEDGPPELLFIHGGHTSKISDFSWNPCEDWVISSVAEDNILQIWQMAENIY 409 (424)
Q Consensus 346 d~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~ 409 (424)
|+..... ....+ .+...|.+++|+|++. ++++ +.|+.|++|++.++..
T Consensus 241 d~~~~~~-------------~~~~~-~~~~~v~~v~~sp~~~-~la~-~~d~~v~iw~~~~~~~ 288 (343)
T 2xzm_R 241 DILNLTY-------------PQREF-DAGSTINQIAFNPKLQ-WVAV-GTDQGVKIFNLMTQSK 288 (343)
T ss_dssp ESSCCSS-------------CSEEE-ECSSCEEEEEECSSSC-EEEE-EESSCEEEEESSSCCS
T ss_pred ECCCCcc-------------cceee-cCCCcEEEEEECCCCC-EEEE-ECCCCEEEEEeCCCCC
Confidence 9954321 11222 2344699999999998 5655 4578899999987643
No 39
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=100.00 E-value=8.6e-35 Score=272.72 Aligned_cols=269 Identities=19% Similarity=0.245 Sum_probs=215.2
Q ss_pred eccCCceeEEEecC-CCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEE-----------ecCCCCeeeEEecCC
Q 014472 122 INHDGEVNRARYMP-QNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRL-----------RGHSTEGYGLSWSKF 189 (424)
Q Consensus 122 ~~h~~~v~~i~~~p-~~~~~latg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~-----------~~h~~~v~~l~~~~~ 189 (424)
..|.+.|++++|+| ++. +||+|+.||.|++|++.... ....... .+|...|.+++|+|+
T Consensus 40 ~~h~~~v~~~~~s~~~~~-~l~~~~~dg~i~iw~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 110 (408)
T 4a11_B 40 RIHGGGINTLDIEPVEGR-YMLSGGSDGVIVLYDLENSS--------RQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPH 110 (408)
T ss_dssp CCCSSCEEEEEECTTTCC-EEEEEETTSCEEEEECCCCS--------SSSCEEECEEEEECTTCTTCCSSCEEEEEECTT
T ss_pred eccCCcEEEEEEecCCCC-EEEEEcCCCeEEEEECCCCc--------ccceEeccccccccccccccCCCcEEEEEEccC
Confidence 35999999999999 775 89999999999999998721 2222211 259999999999996
Q ss_pred CCceEEEEeCCCcEEEEeCCCCCCCCcccceeeeecCCcceeeEEeeCCCC--cEEEEEeCCCeEEEEECCCCCCCCCee
Q 014472 190 KEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHE--YLFGSVGDDQYLLIWDLRTPSVSKPVQ 267 (424)
Q Consensus 190 ~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~--~~~~s~~~dg~i~i~d~~~~~~~~~~~ 267 (424)
+..+|++++.||.|++||+.++. ....+. +...+.++.|++.+. .++++++.+|.|++||++++.. +.
T Consensus 111 ~~~~l~s~~~d~~i~iwd~~~~~------~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~---~~ 180 (408)
T 4a11_B 111 DTGMFTSSSFDKTLKVWDTNTLQ------TADVFN-FEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGSC---SH 180 (408)
T ss_dssp CTTCEEEEETTSEEEEEETTTTE------EEEEEE-CSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSSSCC---CE
T ss_pred CCcEEEEEeCCCeEEEeeCCCCc------cceecc-CCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCcce---ee
Confidence 55589999999999999998752 233333 678899999998654 3778999999999999998664 67
Q ss_pred EecccCCCeeEEEecCCCCeEEEEEeCCCcEEEEECCCCCCcceee---------------cCCCCCEEEEEEcCCCCcE
Q 014472 268 SVVAHQSEVNCLAFNPFNEWILATGSTDKTVKLFDLRKISTALHTF---------------DSHKEEVFQVGWNPKNETI 332 (424)
Q Consensus 268 ~~~~~~~~v~~i~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~---------------~~~~~~v~~~~~sp~~~~~ 332 (424)
.+..|...|++++|+|++.++|++|+.||.|++||++....++..+ ..|...|.+++|+|++. +
T Consensus 181 ~~~~~~~~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~ 259 (408)
T 4a11_B 181 ILQGHRQEILAVSWSPRYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTSDGL-H 259 (408)
T ss_dssp EECCCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECTTSS-E
T ss_pred eecCCCCcEEEEEECCCCCcEEEEEcCCCcEEEEECCCCCcccccccccccccceeeccccccccCceeEEEEcCCCC-E
Confidence 7788999999999999998789999999999999998755455554 57889999999999986 7
Q ss_pred EEEEeCCCeEEEeeCCCCCcccCCCccC---------------------------------CCCCeeeEEEcCCCCCcce
Q 014472 333 LASCCLGRRLMVWDLSRIDEEQTPEDAE---------------------------------DGPPELLFIHGGHTSKISD 379 (424)
Q Consensus 333 l~s~~~dg~i~iwd~~~~~~~~~~~~~~---------------------------------~~~~~~~~~~~~h~~~v~~ 379 (424)
|++++.||.|++||+.++.......... ....+++..+.+|...|++
T Consensus 260 l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~v~~ 339 (408)
T 4a11_B 260 LLTVGTDNRMRLWNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYGSTIAVYTVYSGEQITMLKGHYKTVDC 339 (408)
T ss_dssp EEEEETTSCEEEEETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEETTEEEEEETTTCCEEEEECCCSSCEEE
T ss_pred EEEecCCCeEEEEECCCCccceeccccccccccccceeEEecCCCceEEEEecCCEEEEEECcCCcceeeeccCCCeEEE
Confidence 9999999999999998865432211100 0123556777899999999
Q ss_pred EEeCCCCCcEEEEEeCCCcEEEEecCCCCCCC
Q 014472 380 FSWNPCEDWVISSVAEDNILQIWQMAENIYHD 411 (424)
Q Consensus 380 ~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~~~ 411 (424)
++|+|+++ +|++++.||.|++|++.+.....
T Consensus 340 ~~~s~~~~-~l~s~~~dg~i~iw~~~~~~~~~ 370 (408)
T 4a11_B 340 CVFQSNFQ-ELYSGSRDCNILAWVPSLYEPVP 370 (408)
T ss_dssp EEEETTTT-EEEEEETTSCEEEEEECC-----
T ss_pred EEEcCCCC-EEEEECCCCeEEEEeCCCCCccC
Confidence 99999999 79999999999999999875543
No 40
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=100.00 E-value=7.9e-36 Score=299.28 Aligned_cols=270 Identities=21% Similarity=0.274 Sum_probs=211.8
Q ss_pred EeccCCceeEEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCCeeeEEecCCCCceEEEEeCC
Q 014472 121 QINHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDD 200 (424)
Q Consensus 121 ~~~h~~~v~~i~~~p~~~~~latg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~d 200 (424)
..+|.+.|++++|+|++..+|++|+.||+|+||++...... .......+.+|...|.+++|+|++. +|++|+.|
T Consensus 378 l~~H~~~V~~v~~~~~~~~~l~s~s~D~~i~~W~~~~~~~~-----~~~~~~~~~~h~~~v~~v~~s~~g~-~l~sgs~D 451 (694)
T 3dm0_A 378 MRAHTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKA-----YGVAQRRLTGHSHFVEDVVLSSDGQ-FALSGSWD 451 (694)
T ss_dssp EECCSSCEEEEECCTTCCSEEEEEETTSEEEEEECCCSTTC-----SCEEEEEEECCSSCEEEEEECTTSS-EEEEEETT
T ss_pred cccCCceeEEEEecCCCCCEEEEEeCCCcEEEEEccCCCcc-----cccccceecCCCCcEEEEEECCCCC-EEEEEeCC
Confidence 44799999999999988779999999999999999762111 1233467889999999999999887 89999999
Q ss_pred CcEEEEeCCCCCCCCcccceeeeecCCcceeeEEeeCCCCcEEEEEeCCCeEEEEECCCCCCCCCeeEecccCCCeeEEE
Q 014472 201 AQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLA 280 (424)
Q Consensus 201 g~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~ 280 (424)
|.|++||+.++ .....+.+|...|.+++|+|++.. |++++.|++|++||+.............+|...|.+++
T Consensus 452 g~v~vwd~~~~------~~~~~~~~h~~~v~~~~~s~~~~~-l~s~s~D~~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~ 524 (694)
T 3dm0_A 452 GELRLWDLAAG------VSTRRFVGHTKDVLSVAFSLDNRQ-IVSASRDRTIKLWNTLGECKYTISEGGEGHRDWVSCVR 524 (694)
T ss_dssp SEEEEEETTTT------EEEEEEECCSSCEEEEEECTTSSC-EEEEETTSCEEEECTTSCEEEEECSSTTSCSSCEEEEE
T ss_pred CcEEEEECCCC------cceeEEeCCCCCEEEEEEeCCCCE-EEEEeCCCEEEEEECCCCcceeeccCCCCCCCcEEEEE
Confidence 99999999876 345667889999999999999875 56999999999999865321000111246888999999
Q ss_pred ecCCCC-eEEEEEeCCCcEEEEECCCCCCcceeecCCCCCEEEEEEcCCCCcEEEEEeCCCeEEEeeCCCCCcccCCCcc
Q 014472 281 FNPFNE-WILATGSTDKTVKLFDLRKISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPEDA 359 (424)
Q Consensus 281 ~~~~~~-~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~ 359 (424)
|+|++. .+|++|+.|++|++||+++ ......+.+|...|++++|+|++. +|++++.||.|+|||++++.........
T Consensus 525 ~~~~~~~~~l~s~s~d~~v~vwd~~~-~~~~~~~~~h~~~v~~v~~spdg~-~l~sg~~Dg~i~iwd~~~~~~~~~~~~~ 602 (694)
T 3dm0_A 525 FSPNTLQPTIVSASWDKTVKVWNLSN-CKLRSTLAGHTGYVSTVAVSPDGS-LCASGGKDGVVLLWDLAEGKKLYSLEAN 602 (694)
T ss_dssp ECSCSSSCEEEEEETTSCEEEEETTT-CCEEEEECCCSSCEEEEEECTTSS-EEEEEETTSBCEEEETTTTEEEECCBCS
T ss_pred EeCCCCcceEEEEeCCCeEEEEECCC-CcEEEEEcCCCCCEEEEEEeCCCC-EEEEEeCCCeEEEEECCCCceEEEecCC
Confidence 999862 4799999999999999998 678889999999999999999996 7999999999999999876543322110
Q ss_pred C---------C-----------------CCCeeeEEEcC-------------------CCCCcceEEeCCCCCcEEEEEe
Q 014472 360 E---------D-----------------GPPELLFIHGG-------------------HTSKISDFSWNPCEDWVISSVA 394 (424)
Q Consensus 360 ~---------~-----------------~~~~~~~~~~~-------------------h~~~v~~~~~~~~~~~~l~s~~ 394 (424)
. + ....++..+.. +...+++++|+|+++ +|++|+
T Consensus 603 ~~v~~~~~sp~~~~l~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~spdg~-~l~sgs 681 (694)
T 3dm0_A 603 SVIHALCFSPNRYWLCAATEHGIKIWDLESKSIVEDLKVDLKAEAEKADNSGPAATKRKVIYCTSLNWSADGS-TLFSGY 681 (694)
T ss_dssp SCEEEEEECSSSSEEEEEETTEEEEEETTTTEEEEEECCCCC----------------CCCCEEEEEECTTSS-EEEEEE
T ss_pred CcEEEEEEcCCCcEEEEEcCCCEEEEECCCCCChhhhccccccccccccccccccCCceeEEeeeEEEcCCCC-EEEEEc
Confidence 0 0 00111111211 112367899999999 699999
Q ss_pred CCCcEEEEecCC
Q 014472 395 EDNILQIWQMAE 406 (424)
Q Consensus 395 ~d~~i~iw~~~~ 406 (424)
.||.|+||++..
T Consensus 682 ~Dg~i~iW~i~~ 693 (694)
T 3dm0_A 682 TDGVIRVWGIGR 693 (694)
T ss_dssp TTSEEEEEEC--
T ss_pred CCCeEEEEeccC
Confidence 999999999853
No 41
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=100.00 E-value=1.5e-35 Score=271.48 Aligned_cols=274 Identities=19% Similarity=0.325 Sum_probs=217.7
Q ss_pred eccCCceeEEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCCeeeEEecCC--CCceEEEEeC
Q 014472 122 INHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKF--KEGHLLSGSD 199 (424)
Q Consensus 122 ~~h~~~v~~i~~~p~~~~~latg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~--~~~~l~s~~~ 199 (424)
.+|.+.|++++|+|++. +||+|+.||.|+||++.... ........+.+|...|.+++|+|. +. +|++|+.
T Consensus 8 ~gH~~~v~~~~~~~~~~-~l~~~~~dg~i~iw~~~~~~------~~~~~~~~~~~~~~~v~~~~~~~~~d~~-~l~s~~~ 79 (351)
T 3f3f_A 8 SGHDDLVHDVVYDFYGR-HVATCSSDQHIKVFKLDKDT------SNWELSDSWRAHDSSIVAIDWASPEYGR-IIASASY 79 (351)
T ss_dssp CCCSSCEEEEEECSSSS-EEEEEETTSEEEEEEECSSS------CCEEEEEEEECCSSCEEEEEECCGGGCS-EEEEEET
T ss_pred cccccceeEEEEcCCCC-EEEEeeCCCeEEEEECCCCC------CcceecceeccCCCcEEEEEEcCCCCCC-EEEEEcC
Confidence 47999999999999886 89999999999999998621 112345667899999999999994 55 8999999
Q ss_pred CCcEEEEeCCCCCCC---CcccceeeeecCCcceeeEEeeCC--CCcEEEEEeCCCeEEEEECCCCCCCCCeeE------
Q 014472 200 DAQICLWDINAAPKN---KSLEAMQIFKVHEGVVEDVAWHLR--HEYLFGSVGDDQYLLIWDLRTPSVSKPVQS------ 268 (424)
Q Consensus 200 dg~i~vwd~~~~~~~---~~~~~~~~~~~~~~~v~~i~~~~~--~~~~~~s~~~dg~i~i~d~~~~~~~~~~~~------ 268 (424)
||.|++||+..+... .....+..+..|...|.+++|+|+ +. ++++++.||.|++||+++......+..
T Consensus 80 dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~-~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~ 158 (351)
T 3f3f_A 80 DKTVKLWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGL-KLACLGNDGILRLYDALEPSDLRSWTLTSEMKV 158 (351)
T ss_dssp TSCEEEEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCS-EEEEEETTCEEEEEECSSTTCTTCCEEEEEEES
T ss_pred CCeEEEEecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCc-EEEEecCCCcEEEecCCChHHhccccccccccc
Confidence 999999999876432 122446667789999999999998 65 667999999999999998765333221
Q ss_pred ----ecccCCCeeEEEecCC---CCeEEEEEeCCCcEEEEECCCCCCc--ceeecCCCCCEEEEEEcCCCC---cEEEEE
Q 014472 269 ----VVAHQSEVNCLAFNPF---NEWILATGSTDKTVKLFDLRKISTA--LHTFDSHKEEVFQVGWNPKNE---TILASC 336 (424)
Q Consensus 269 ----~~~~~~~v~~i~~~~~---~~~~l~~g~~dg~i~iwd~~~~~~~--~~~~~~~~~~v~~~~~sp~~~---~~l~s~ 336 (424)
...|...+.+++|+|+ +. +|++++.++.+.+|+... ... +..+.+|...|++++|+|++. .+|+++
T Consensus 159 ~~~~~~~~~~~~~~~~~~p~~~~~~-~l~~~~~~~~~~~~~~~~-~~~~~~~~~~~h~~~i~~~~~~p~~~~~~~~l~s~ 236 (351)
T 3f3f_A 159 LSIPPANHLQSDFCLSWCPSRFSPE-KLAVSALEQAIIYQRGKD-GKLHVAAKLPGHKSLIRSISWAPSIGRWYQLIATG 236 (351)
T ss_dssp CSCCCSSCSCCCEEEEECCCSSSCC-EEEEEETTEEEEEEECTT-SCEEEEEECCCCCSCEEEEEECCCSSCSSEEEEEE
T ss_pred cccccCCcccceeEEEeccCCCCCc-EEEEecCCCcEEEEccCC-CceeeeeecCCCCcceeEEEECCCCCCcceEEEEE
Confidence 1257789999999997 55 799999999998887766 443 677888999999999999983 489999
Q ss_pred eCCCeEEEeeCCCCCcccCCCcc--------------------------------CCCCCeeeEEEcCCCCCcceEEeCC
Q 014472 337 CLGRRLMVWDLSRIDEEQTPEDA--------------------------------EDGPPELLFIHGGHTSKISDFSWNP 384 (424)
Q Consensus 337 ~~dg~i~iwd~~~~~~~~~~~~~--------------------------------~~~~~~~~~~~~~h~~~v~~~~~~~ 384 (424)
+.||.|++||++........... ......++..+.+|...|++++|+|
T Consensus 237 ~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~ 316 (351)
T 3f3f_A 237 CKDGRIRIFKITEKLSPLASEESLTNSNMFDNSADVDMDAQGRSDSNTEEKAELQSNLQVELLSEHDDHNGEVWSVSWNL 316 (351)
T ss_dssp ETTSCEEEEEEEECC---------------------------------------CCSEEEEEEEEECTTSSCEEEEEECS
T ss_pred cCCCeEEEEeCCCCcCccccCCcccceeccCCCcccccccccccccccceeeeecccccccEEEEEecccccEEEEEEcC
Confidence 99999999999865322111000 0011256778889999999999999
Q ss_pred CCCcEEEEEeCCCcEEEEecCCC
Q 014472 385 CEDWVISSVAEDNILQIWQMAEN 407 (424)
Q Consensus 385 ~~~~~l~s~~~d~~i~iw~~~~~ 407 (424)
+++ +|++++.||.|+||++..+
T Consensus 317 ~~~-~l~s~~~dg~v~iw~~~~~ 338 (351)
T 3f3f_A 317 TGT-ILSSAGDDGKVRLWKATYS 338 (351)
T ss_dssp SSC-CEEEEETTSCEEEEEECTT
T ss_pred CCC-EEEEecCCCcEEEEecCcC
Confidence 999 6999999999999999875
No 42
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=100.00 E-value=1.2e-34 Score=271.86 Aligned_cols=257 Identities=21% Similarity=0.369 Sum_probs=215.3
Q ss_pred CcEEEEEEeccCCceeEEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCCeeeEEecCCCCce
Q 014472 114 GKVQIIQQINHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGH 193 (424)
Q Consensus 114 ~~~~~~~~~~h~~~v~~i~~~p~~~~~latg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~ 193 (424)
++........|.+.|.+++|+|++. +||+|+.||.|++||+.. ......+.+|...|.+++|++ . +
T Consensus 123 ~~~~~~~~~~~~~~v~~v~~s~~~~-~l~~~~~dg~i~iwd~~~----------~~~~~~~~~~~~~v~~~~~~~--~-~ 188 (401)
T 4aez_A 123 GSVSALAETDESTYVASVKWSHDGS-FLSVGLGNGLVDIYDVES----------QTKLRTMAGHQARVGCLSWNR--H-V 188 (401)
T ss_dssp CCEEEEEECCTTCCEEEEEECTTSS-EEEEEETTSCEEEEETTT----------CCEEEEECCCSSCEEEEEEET--T-E
T ss_pred CcEeEeeecCCCCCEEEEEECCCCC-EEEEECCCCeEEEEECcC----------CeEEEEecCCCCceEEEEECC--C-E
Confidence 3444455556899999999999886 899999999999999987 456777889999999999953 3 7
Q ss_pred EEEEeCCCcEEEEeCCCCCCCCcccceeeeecCCcceeeEEeeCCCCcEEEEEeCCCeEEEEECCCCCCCCCeeEecccC
Q 014472 194 LLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQ 273 (424)
Q Consensus 194 l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~ 273 (424)
|++|+.||.|++||++... .....+.+|...|.+++|+|++. +|++++.||.|++||+++.. ++..+..|.
T Consensus 189 l~~~~~dg~i~i~d~~~~~-----~~~~~~~~~~~~v~~~~~~~~~~-~l~s~~~d~~v~iwd~~~~~---~~~~~~~~~ 259 (401)
T 4aez_A 189 LSSGSRSGAIHHHDVRIAN-----HQIGTLQGHSSEVCGLAWRSDGL-QLASGGNDNVVQIWDARSSI---PKFTKTNHN 259 (401)
T ss_dssp EEEEETTSEEEEEETTSSS-----CEEEEEECCSSCEEEEEECTTSS-EEEEEETTSCEEEEETTCSS---EEEEECCCS
T ss_pred EEEEcCCCCEEEEecccCc-----ceeeEEcCCCCCeeEEEEcCCCC-EEEEEeCCCeEEEccCCCCC---ccEEecCCc
Confidence 9999999999999998542 24566778999999999999876 66799999999999999855 467778899
Q ss_pred CCeeEEEecCCCCeEEEEEe--CCCcEEEEECCCCCCcceeecCCCCCEEEEEEcCCCCcEEEE--EeCCCeEEEeeCCC
Q 014472 274 SEVNCLAFNPFNEWILATGS--TDKTVKLFDLRKISTALHTFDSHKEEVFQVGWNPKNETILAS--CCLGRRLMVWDLSR 349 (424)
Q Consensus 274 ~~v~~i~~~~~~~~~l~~g~--~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~s--~~~dg~i~iwd~~~ 349 (424)
..|.+++|+|++..++++|+ .|+.|++||+++ +.++..+. +...|.+++|+|++. +|++ |+.||.|++|++..
T Consensus 260 ~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~-~~~~~~~~-~~~~v~~~~~s~~~~-~l~~~~g~~dg~i~v~~~~~ 336 (401)
T 4aez_A 260 AAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAAT-GARVNTVD-AGSQVTSLIWSPHSK-EIMSTHGFPDNNLSIWSYSS 336 (401)
T ss_dssp SCCCEEEECTTSTTEEEEECCTTTCEEEEEETTT-CCEEEEEE-CSSCEEEEEECSSSS-EEEEEECTTTCEEEEEEEET
T ss_pred ceEEEEEECCCCCCEEEEecCCCCCEEEEEECCC-CCEEEEEe-CCCcEEEEEECCCCC-eEEEEeecCCCcEEEEecCC
Confidence 99999999999888888876 799999999998 67777775 577899999999997 5666 34899999999976
Q ss_pred CCcccCCCccCCCCCeeeEEEcCCCCCcceEEeCCCCCcEEEEEeCCCcEEEEecCCCCC
Q 014472 350 IDEEQTPEDAEDGPPELLFIHGGHTSKISDFSWNPCEDWVISSVAEDNILQIWQMAENIY 409 (424)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~ 409 (424)
... .....+.+|...|.+++|+|+++ +|++++.||.|++|++.++..
T Consensus 337 ~~~------------~~~~~~~~h~~~v~~~~~s~dg~-~l~s~~~dg~i~iw~~~~~~~ 383 (401)
T 4aez_A 337 SGL------------TKQVDIPAHDTRVLYSALSPDGR-ILSTAASDENLKFWRVYDGDH 383 (401)
T ss_dssp TEE------------EEEEEEECCSSCCCEEEECTTSS-EEEEECTTSEEEEEECCC---
T ss_pred ccc------------eeEEEecCCCCCEEEEEECCCCC-EEEEEeCCCcEEEEECCCCcc
Confidence 421 34455678999999999999999 699999999999999988754
No 43
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=9e-36 Score=294.29 Aligned_cols=245 Identities=20% Similarity=0.314 Sum_probs=207.3
Q ss_pred cCCceeEEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCCeeeEEecCCCCceEEEEeCCCcE
Q 014472 124 HDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDDAQI 203 (424)
Q Consensus 124 h~~~v~~i~~~p~~~~~latg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i 203 (424)
+.+.+.+++|+|++. +||+++ ++.|+||++.. ......+.+|...|++++|+|++. +|++|+.||+|
T Consensus 17 ~~g~~~~~~~spdg~-~l~~~~-~~~v~l~~~~~----------~~~~~~~~~h~~~v~~~~~spdg~-~lasg~~d~~v 83 (611)
T 1nr0_A 17 ARGTAVVLGNTPAGD-KIQYCN-GTSVYTVPVGS----------LTDTEIYTEHSHQTTVAKTSPSGY-YCASGDVHGNV 83 (611)
T ss_dssp CTTCCCCCEECTTSS-EEEEEE-TTEEEEEETTC----------SSCCEEECCCSSCEEEEEECTTSS-EEEEEETTSEE
T ss_pred ccCceeEEeeCCCCC-EEEeCC-CCEEEEecCCC----------cccCeEecCCCCceEEEEECCCCc-EEEEEeCCCCE
Confidence 467888999999997 788877 57999999976 455678899999999999999987 89999999999
Q ss_pred EEEeCCCCCCCCcccceeeeecCCcceeeEEeeCCCCcEEEEEeCC----CeEEEEECCCCCCCCCeeEecccCCCeeEE
Q 014472 204 CLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDD----QYLLIWDLRTPSVSKPVQSVVAHQSEVNCL 279 (424)
Q Consensus 204 ~vwd~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~~s~~~d----g~i~i~d~~~~~~~~~~~~~~~~~~~v~~i 279 (424)
+|||+.++.. .....+.+|.+.|.+++|+|+++.+ ++++.+ +.|++||... ....+.+|...|+++
T Consensus 84 ~lWd~~~~~~----~~~~~~~~~~~~v~~v~fs~dg~~l-~~~~~~~~~~~~v~~wd~~~-----~~~~l~gh~~~v~~v 153 (611)
T 1nr0_A 84 RIWDTTQTTH----ILKTTIPVFSGPVKDISWDSESKRI-AAVGEGRERFGHVFLFDTGT-----SNGNLTGQARAMNSV 153 (611)
T ss_dssp EEEESSSTTC----CEEEEEECSSSCEEEEEECTTSCEE-EEEECCSSCSEEEEETTTCC-----BCBCCCCCSSCEEEE
T ss_pred EEeECCCCcc----eeeEeecccCCceEEEEECCCCCEE-EEEECCCCceeEEEEeeCCC-----CcceecCCCCCceEE
Confidence 9999965432 2234567899999999999999855 455544 4788888533 245567899999999
Q ss_pred EecCCCCeEEEEEeCCCcEEEEECCCCCCcceeecCCCCCEEEEEEcCCCCcEEEEEeCCCeEEEeeCCCCCcccCCCcc
Q 014472 280 AFNPFNEWILATGSTDKTVKLFDLRKISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPEDA 359 (424)
Q Consensus 280 ~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~ 359 (424)
+|+|+++..|++|+.|++|++||.+. .+.+..+.+|...|.+++|+|++. +|++++.|++|++||+..+..
T Consensus 154 ~f~p~~~~~l~s~s~D~~v~lwd~~~-~~~~~~l~~H~~~V~~v~fspdg~-~las~s~D~~i~lwd~~~g~~------- 224 (611)
T 1nr0_A 154 DFKPSRPFRIISGSDDNTVAIFEGPP-FKFKSTFGEHTKFVHSVRYNPDGS-LFASTGGDGTIVLYNGVDGTK------- 224 (611)
T ss_dssp EECSSSSCEEEEEETTSCEEEEETTT-BEEEEEECCCSSCEEEEEECTTSS-EEEEEETTSCEEEEETTTCCE-------
T ss_pred EECCCCCeEEEEEeCCCeEEEEECCC-CeEeeeeccccCceEEEEECCCCC-EEEEEECCCcEEEEECCCCcE-------
Confidence 99999886799999999999999887 677888999999999999999996 799999999999999987532
Q ss_pred CCCCCeeeEEEc-------CCCCCcceEEeCCCCCcEEEEEeCCCcEEEEecCCCC
Q 014472 360 EDGPPELLFIHG-------GHTSKISDFSWNPCEDWVISSVAEDNILQIWQMAENI 408 (424)
Q Consensus 360 ~~~~~~~~~~~~-------~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~ 408 (424)
+..+. +|...|++++|+|+++ +|++++.|+.|++||+.++.
T Consensus 225 -------~~~~~~~~~~~~~h~~~V~~v~~spdg~-~l~s~s~D~~v~lWd~~~~~ 272 (611)
T 1nr0_A 225 -------TGVFEDDSLKNVAHSGSVFGLTWSPDGT-KIASASADKTIKIWNVATLK 272 (611)
T ss_dssp -------EEECBCTTSSSCSSSSCEEEEEECTTSS-EEEEEETTSEEEEEETTTTE
T ss_pred -------eeeeccccccccccCCCEEEEEECCCCC-EEEEEeCCCeEEEEeCCCCc
Confidence 33331 7999999999999999 79999999999999998764
No 44
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=8.3e-36 Score=276.81 Aligned_cols=258 Identities=19% Similarity=0.303 Sum_probs=213.1
Q ss_pred eccCCceeEEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCCeeeEEecCC--CCceEEEEeC
Q 014472 122 INHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKF--KEGHLLSGSD 199 (424)
Q Consensus 122 ~~h~~~v~~i~~~p~~~~~latg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~--~~~~l~s~~~ 199 (424)
-+|.+.|++++|+|++. +||+|+.||.|+||++.. ........+.+|...|++++|+++ +. +|++|+.
T Consensus 8 ~~h~~~v~~~~~s~~~~-~l~~~~~dg~i~iw~~~~--------~~~~~~~~~~~h~~~v~~~~~~~~~~~~-~l~s~~~ 77 (379)
T 3jrp_A 8 NAHNELIHDAVLDYYGK-RLATCSSDKTIKIFEVEG--------ETHKLIDTLTGHEGPVWRVDWAHPKFGT-ILASCSY 77 (379)
T ss_dssp EECCCCEEEEEECSSSS-EEEEEETTSCEEEEEEET--------TEEEEEEEECCCSSCEEEEEECCGGGCS-EEEEEET
T ss_pred cCCcccEEEEEEcCCCC-EEEEEECCCcEEEEecCC--------CcceeeeEecCCCCcEEEEEeCCCCCCC-EEEEecc
Confidence 47999999999999987 899999999999999974 224556778899999999999876 55 8999999
Q ss_pred CCcEEEEeCCCCCCCCcccceeeeecCCcceeeEEeeCC--CCcEEEEEeCCCeEEEEECCCCCCCCCeeEecccCCCee
Q 014472 200 DAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLR--HEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVN 277 (424)
Q Consensus 200 dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~--~~~~~~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~ 277 (424)
||.|++||+.++. ...+..+..|...|.+++|+|+ +. ++++++.||.|++||++.... .....+..|...|+
T Consensus 78 dg~v~iwd~~~~~----~~~~~~~~~~~~~v~~~~~~~~~~~~-~l~~~~~d~~i~v~d~~~~~~-~~~~~~~~~~~~v~ 151 (379)
T 3jrp_A 78 DGKVLIWKEENGR----WSQIAVHAVHSASVNSVQWAPHEYGP-LLLVASSDGKVSVVEFKENGT-TSPIIIDAHAIGVN 151 (379)
T ss_dssp TSCEEEEEEETTE----EEEEEEECCCSSCEEEEEECCGGGCS-EEEEEETTSEEEEEECCTTSC-CCEEEEECCTTCEE
T ss_pred CCEEEEEEcCCCc----eeEeeeecCCCcceEEEEeCCCCCCC-EEEEecCCCcEEEEecCCCCc-eeeEEecCCCCceE
Confidence 9999999998652 1245666779999999999998 65 677999999999999998753 33456678999999
Q ss_pred EEEecC-------------CCCeEEEEEeCCCcEEEEECCCCCC---cceeecCCCCCEEEEEEcCCC--CcEEEEEeCC
Q 014472 278 CLAFNP-------------FNEWILATGSTDKTVKLFDLRKIST---ALHTFDSHKEEVFQVGWNPKN--ETILASCCLG 339 (424)
Q Consensus 278 ~i~~~~-------------~~~~~l~~g~~dg~i~iwd~~~~~~---~~~~~~~~~~~v~~~~~sp~~--~~~l~s~~~d 339 (424)
+++|+| ++. +|++|+.||.|++||++.... .+..+..|...|.+++|+|++ ..+|++++.|
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d 230 (379)
T 3jrp_A 152 SASWAPATIEEDGEHNGTKESR-KFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQD 230 (379)
T ss_dssp EEEECCCC----------CTTC-EEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETT
T ss_pred EEEEcCccccccccccCCCCCC-EEEEEeCCCeEEEEEecCCCcceeeEEEEecccCcEeEEEECCCCCCCCeEEEEeCC
Confidence 999999 465 799999999999999987432 446778899999999999993 3589999999
Q ss_pred CeEEEeeCCCCCcccCCCccCCCCCeeeEEEcCCCCCcceEEeCCCCCcEEEEEeCCCcEEEEecCC
Q 014472 340 RRLMVWDLSRIDEEQTPEDAEDGPPELLFIHGGHTSKISDFSWNPCEDWVISSVAEDNILQIWQMAE 406 (424)
Q Consensus 340 g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iw~~~~ 406 (424)
|.|++||++...... ...+.....|...|++++|+|+++ +|++++.||.|++|++..
T Consensus 231 g~i~iwd~~~~~~~~---------~~~~~~~~~~~~~v~~~~~s~~g~-~l~~~~~dg~i~iw~~~~ 287 (379)
T 3jrp_A 231 RTCIIWTQDNEQGPW---------KKTLLKEEKFPDVLWRASWSLSGN-VLALSGGDNKVTLWKENL 287 (379)
T ss_dssp SCEEEEEESSTTSCC---------EEEESSSSCCSSCEEEEEECSSSC-CEEEEESSSSEEEEEEEE
T ss_pred CEEEEEeCCCCCccc---------eeeeeccccCCCcEEEEEEcCCCC-EEEEecCCCcEEEEeCCC
Confidence 999999998753210 012222345788899999999999 588889999999999973
No 45
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=100.00 E-value=5.9e-35 Score=272.08 Aligned_cols=245 Identities=16% Similarity=0.224 Sum_probs=195.7
Q ss_pred eccCCceeEEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEec---CCCCeeeEEecCCCCceEEEEe
Q 014472 122 INHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRG---HSTEGYGLSWSKFKEGHLLSGS 198 (424)
Q Consensus 122 ~~h~~~v~~i~~~p~~~~~latg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~---h~~~v~~l~~~~~~~~~l~s~~ 198 (424)
.+|.+.|.+++|+|++..+|++|+.||.|++||+.. .....+.. |...|.+++|+|++. +|++|+
T Consensus 115 ~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~-----------~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~ 182 (383)
T 3ei3_B 115 MGPGDAITGMKFNQFNTNQLFVSSIRGATTLRDFSG-----------SVIQVFAKTDSWDYWYCCVDVSVSRQ-MLATGD 182 (383)
T ss_dssp CSTTCBEEEEEEETTEEEEEEEEETTTEEEEEETTS-----------CEEEEEECCCCSSCCEEEEEEETTTT-EEEEEE
T ss_pred CCcCCceeEEEeCCCCCCEEEEEeCCCEEEEEECCC-----------CceEEEeccCCCCCCeEEEEECCCCC-EEEEEC
Confidence 479999999999996556899999999999999985 22334433 458899999999887 799999
Q ss_pred CCCcEEEEeCCCCCCCCcccceeeeecCCcceeeEEeeCCCCcEEEEEeCCCeEEEEECCCCCCCCCeeEecccCCCeeE
Q 014472 199 DDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNC 278 (424)
Q Consensus 199 ~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~ 278 (424)
.||.|++||++. ..+..+..|...|.+++|+|+++.++++++.|+.|++||+++............|...|++
T Consensus 183 ~d~~i~i~d~~~-------~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~v~~ 255 (383)
T 3ei3_B 183 STGRLLLLGLDG-------HEIFKEKLHKAKVTHAEFNPRCDWLMATSSVDATVKLWDLRNIKDKNSYIAEMPHEKPVNA 255 (383)
T ss_dssp TTSEEEEEETTS-------CEEEEEECSSSCEEEEEECSSCTTEEEEEETTSEEEEEEGGGCCSTTCEEEEEECSSCEEE
T ss_pred CCCCEEEEECCC-------CEEEEeccCCCcEEEEEECCCCCCEEEEEeCCCEEEEEeCCCCCcccceEEEecCCCceEE
Confidence 999999999942 2456678899999999999999878889999999999999985432333333479999999
Q ss_pred EEecC-CCCeEEEEEeCCCcEEEEECCCCCCcceeecCCC-----------------CCEEEEEEcCCCCcEEEEEeCCC
Q 014472 279 LAFNP-FNEWILATGSTDKTVKLFDLRKISTALHTFDSHK-----------------EEVFQVGWNPKNETILASCCLGR 340 (424)
Q Consensus 279 i~~~~-~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~-----------------~~v~~~~~sp~~~~~l~s~~~dg 340 (424)
++|+| ++. +|++++.|+.|++||+++ ...+..+..|. ..+..++|+|++.. +++.|+
T Consensus 256 ~~~s~~~~~-~l~~~~~d~~i~iwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~s~dg~~---s~s~d~ 330 (383)
T 3ei3_B 256 AYFNPTDST-KLLTTDQRNEIRVYSSYD-WSKPDQIIIHPHRQFQHLTPIKATWHPMYDLIVAGRYPDDQL---LLNDKR 330 (383)
T ss_dssp EEECTTTSC-EEEEEESSSEEEEEETTB-TTSCSEEEECCBCCCTTSCCCCCEECSSSSEEEEECBCCTTT---CTTCCC
T ss_pred EEEcCCCCC-EEEEEcCCCcEEEEECCC-CccccccccccccccccccceEEeccCCCCceEEEecCCccc---ccCCCC
Confidence 99999 887 689999999999999997 44545554332 33445666666642 677899
Q ss_pred eEEEeeCCCCCcccCCCccCCCCCeeeEEEcC--CCCCcceEEeCCCCCcEEEEEeCCCcEEEEecCC
Q 014472 341 RLMVWDLSRIDEEQTPEDAEDGPPELLFIHGG--HTSKISDFSWNPCEDWVISSVAEDNILQIWQMAE 406 (424)
Q Consensus 341 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~--h~~~v~~~~~~~~~~~~l~s~~~d~~i~iw~~~~ 406 (424)
.|+|||+.++ +++..+.+ |...+..++|+|+++ +|++++ |+.|+||++.+
T Consensus 331 ~i~iwd~~~~--------------~~~~~l~~~~~~~~~~~~~~s~~g~-~l~s~s-d~~i~iw~~~~ 382 (383)
T 3ei3_B 331 TIDIYDANSG--------------GLVHQLRDPNAAGIISLNKFSPTGD-VLASGM-GFNILIWNRED 382 (383)
T ss_dssp CEEEEETTTC--------------CEEEEECBTTBCSCCCEEEECTTSS-EEEEEE-TTEEEEEECC-
T ss_pred eEEEEecCCC--------------ceeeeecCCCCCceEEEEEEecCcc-EEEEec-CCcEEEEecCC
Confidence 9999999875 44556665 456677789999999 688887 99999999975
No 46
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.1e-36 Score=290.81 Aligned_cols=261 Identities=14% Similarity=0.133 Sum_probs=203.7
Q ss_pred EeccCCceeEEEecCCC-C-------cEEEE-------------------EecCCeEEEEeCCCCCCCCCCCCCCC--Cc
Q 014472 121 QINHDGEVNRARYMPQN-P-------FLIAT-------------------KTVSAEVYVFDYSKHPSKPPLDGACS--PD 171 (424)
Q Consensus 121 ~~~h~~~v~~i~~~p~~-~-------~~lat-------------------g~~dg~v~iwd~~~~~~~~~~~~~~~--~~ 171 (424)
.+.+.+.|.+|+|+|++ . .+||+ ++.|++|+||++... ... ..
T Consensus 129 ~~~~~~~V~sv~w~p~~~~~~~~~~~~~LAv~~~~~~~~~~~~~~~~laS~s~D~tI~iWd~~~~--------~~~~~~~ 200 (524)
T 2j04_B 129 IYNVGGLVTDIAWLNIEENTDIGKDIQYLAVAVSQYMDEPLNEHLEMFDKEKHSSCIQIFKMNTS--------TLHCVKV 200 (524)
T ss_dssp EEECCC--CCCSCEEECCCCSSCSSEEEEEEEEEC------------------CEEEEEEEEETT--------TCCEEEE
T ss_pred EEECCCceeEEEecccCCCCccCcCCeEEEEEEecccCCccchhhhhhccCCCCceEEEEEccCC--------CCCceEE
Confidence 34578999999999975 1 36666 457789999998761 111 12
Q ss_pred EEEecCCCCeeeEEecCCC-----CceEEEEeCCCcEEEEeCCCCCCCC-----cccceeeeecCCcceeeEEeeCCCCc
Q 014472 172 LRLRGHSTEGYGLSWSKFK-----EGHLLSGSDDAQICLWDINAAPKNK-----SLEAMQIFKVHEGVVEDVAWHLRHEY 241 (424)
Q Consensus 172 ~~~~~h~~~v~~l~~~~~~-----~~~l~s~~~dg~i~vwd~~~~~~~~-----~~~~~~~~~~~~~~v~~i~~~~~~~~ 241 (424)
..+.+|.+.|.+|+|+|++ ..+|++++.||+|++||+..+.... ...+...+.+|...|++++|++++
T Consensus 201 ~~l~~~~~~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~~p~~~l~~h~~~v~sv~~s~~~-- 278 (524)
T 2j04_B 201 QTIVHSFGEVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKMCEKPSLTLSLADSLITTFDFLSPT-- 278 (524)
T ss_dssp EEEEECCCSEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEECCCSCSEEECCTTTCEEEEEESSSS--
T ss_pred EEEEecCCcEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccceeecCceEEEEcCCCCEEEEEecCCC--
Confidence 3466788999999999962 2489999999999999998664321 112334577899999999999864
Q ss_pred EEEEEeCCCeEEEEECCCCCCCCCeeEecccCCCeeEE--EecCCCCeEEEEEeCCCcEEEEECCCCCCcceeecCCCC-
Q 014472 242 LFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCL--AFNPFNEWILATGSTDKTVKLFDLRKISTALHTFDSHKE- 318 (424)
Q Consensus 242 ~~~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~i--~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~~- 318 (424)
.|++|+.||+|++||++++.. +...+..|...|++| +|+|++..+||+|+.|++|+|||+++ ..++..+.+|..
T Consensus 279 ~lasgs~DgtV~lWD~~~~~~--~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~~-~~~~~~~~~~~~~ 355 (524)
T 2j04_B 279 TVVCGFKNGFVAEFDLTDPEV--PSFYDQVHDSYILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKD-IATTKTTVSRFRG 355 (524)
T ss_dssp EEEEEETTSEEEEEETTBCSS--CSEEEECSSSCEEEEEEECCTTSCCEEEEEETTSEEEEECGGG-HHHHCEEEEECSC
T ss_pred eEEEEeCCCEEEEEECCCCCC--ceEEeecccccEEEEEEEcCCCCCeEEEEeccCCeEEEEECCC-CCccccccccccc
Confidence 678999999999999987643 455678899999999 57887634899999999999999997 566666666653
Q ss_pred -CEEEEEEcCCCCcEEEEEeCCCeEEEeeCCCCCcccCCCccCCCCCeeeEEEcCCCCCcceEEeCCCCCcEEEEEeCCC
Q 014472 319 -EVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPEDAEDGPPELLFIHGGHTSKISDFSWNPCEDWVISSVAEDN 397 (424)
Q Consensus 319 -~v~~~~~sp~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~ 397 (424)
.|.+++|+|+++ .|++++.|++|++||++.+ .++..+.+|...|++++|+|+++ +|++|+.||
T Consensus 356 ~~v~~v~fsp~~~-~l~s~~~d~tv~lwd~~~~--------------~~~~~l~gH~~~V~sva~Sp~g~-~l~Sgs~Dg 419 (524)
T 2j04_B 356 SNLVPVVYCPQIY-SYIYSDGASSLRAVPSRAA--------------FAVHPLVSRETTITAIGVSRLHP-MVLAGSADG 419 (524)
T ss_dssp CSCCCEEEETTTT-EEEEECSSSEEEEEETTCT--------------TCCEEEEECSSCEEEEECCSSCC-BCEEEETTT
T ss_pred CcccceEeCCCcC-eEEEeCCCCcEEEEECccc--------------ccceeeecCCCceEEEEeCCCCC-eEEEEECCC
Confidence 588999999986 6889999999999999875 33455668999999999999999 689999999
Q ss_pred cEEEEecCCCCCC
Q 014472 398 ILQIWQMAENIYH 410 (424)
Q Consensus 398 ~i~iw~~~~~~~~ 410 (424)
+|++|++....+.
T Consensus 420 tv~lwd~~~~~~~ 432 (524)
T 2j04_B 420 SLIITNAARRLLH 432 (524)
T ss_dssp EEECCBSCSSTTT
T ss_pred EEEEEechHhhcc
Confidence 9999999876554
No 47
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.1e-34 Score=268.07 Aligned_cols=274 Identities=15% Similarity=0.282 Sum_probs=225.1
Q ss_pred CcEEEEEEeccCCceeEEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCCeeeEEecCCCCce
Q 014472 114 GKVQIIQQINHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGH 193 (424)
Q Consensus 114 ~~~~~~~~~~h~~~v~~i~~~p~~~~~latg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~ 193 (424)
..++.....+|.+.|++++|+|++. +||+|+.||.|++||+.. ......+.+|...|.+++|+|++. +
T Consensus 21 ~~~~~~~l~~h~~~v~~~~~s~~~~-~l~~~~~dg~i~vwd~~~----------~~~~~~~~~h~~~v~~~~~~~~~~-~ 88 (369)
T 3zwl_B 21 SHMKAIKLTGHERPLTQVKYNKEGD-LLFSCSKDSSASVWYSLN----------GERLGTLDGHTGTIWSIDVDCFTK-Y 88 (369)
T ss_dssp CSEEEEEEECCSSCEEEEEECTTSC-EEEEEESSSCEEEEETTT----------CCEEEEECCCSSCEEEEEECTTSS-E
T ss_pred cccccEEEEEeeceEEEEEEcCCCC-EEEEEeCCCEEEEEeCCC----------chhhhhhhhcCCcEEEEEEcCCCC-E
Confidence 3566677778999999999999886 899999999999999987 456778889999999999999887 7
Q ss_pred EEEEeCCCcEEEEeCCCCCCCCcccceeeeecCCcceeeEEeeCCCCcEEEEEeCC-----CeEEEEECCCCCCCC----
Q 014472 194 LLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDD-----QYLLIWDLRTPSVSK---- 264 (424)
Q Consensus 194 l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~~s~~~d-----g~i~i~d~~~~~~~~---- 264 (424)
|++++.||.|++||+.++. .+..+. +...|.+++|+|++.. +++++.+ |.|++||++......
T Consensus 89 l~s~~~dg~i~iwd~~~~~------~~~~~~-~~~~v~~~~~~~~~~~-l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~ 160 (369)
T 3zwl_B 89 CVTGSADYSIKLWDVSNGQ------CVATWK-SPVPVKRVEFSPCGNY-FLAILDNVMKNPGSINIYEIERDSATHELTK 160 (369)
T ss_dssp EEEEETTTEEEEEETTTCC------EEEEEE-CSSCEEEEEECTTSSE-EEEEECCBTTBCCEEEEEEEEECTTTCCEEE
T ss_pred EEEEeCCCeEEEEECCCCc------EEEEee-cCCCeEEEEEccCCCE-EEEecCCccCCCCEEEEEEecCCccceeecc
Confidence 9999999999999998763 334444 7889999999999875 5578888 999999998765322
Q ss_pred ----CeeEecccCC--CeeEEEecCCCCeEEEEEeCCCcEEEEECCCCCCcceeecCCCCCEEEEEEcCCCCcEEEEEeC
Q 014472 265 ----PVQSVVAHQS--EVNCLAFNPFNEWILATGSTDKTVKLFDLRKISTALHTFDSHKEEVFQVGWNPKNETILASCCL 338 (424)
Q Consensus 265 ----~~~~~~~~~~--~v~~i~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~s~~~ 338 (424)
++..+..|.. .+.+++|+|++. +|++|+.||.|++||+++...++..+..|...|.+++|+|++. +|++++.
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~ 238 (369)
T 3zwl_B 161 VSEEPIHKIITHEGLDAATVAGWSTKGK-YIIAGHKDGKISKYDVSNNYEYVDSIDLHEKSISDMQFSPDLT-YFITSSR 238 (369)
T ss_dssp ECSSCSEEEECCTTCCCEEEEEECGGGC-EEEEEETTSEEEEEETTTTTEEEEEEECCSSCEEEEEECTTSS-EEEEEET
T ss_pred cccceeeeccCCcCccceeEEEEcCCCC-EEEEEcCCCEEEEEECCCCcEeEEEEecCCCceeEEEECCCCC-EEEEecC
Confidence 3344455655 899999999988 6899999999999999986678888999999999999999986 7899999
Q ss_pred CCeEEEeeCCCCCcccCCCccC-----------------------------------------CCCCeeeEEEcCCCCCc
Q 014472 339 GRRLMVWDLSRIDEEQTPEDAE-----------------------------------------DGPPELLFIHGGHTSKI 377 (424)
Q Consensus 339 dg~i~iwd~~~~~~~~~~~~~~-----------------------------------------~~~~~~~~~~~~h~~~v 377 (424)
|+.|++||+++........... ....+.+..+.+|...|
T Consensus 239 d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v 318 (369)
T 3zwl_B 239 DTNSFLVDVSTLQVLKKYETDCPLNTAVITPLKEFIILGGGQEAKDVTTTSANEGKFEARFYHKIFEEEIGRVQGHFGPL 318 (369)
T ss_dssp TSEEEEEETTTCCEEEEEECSSCEEEEEECSSSSEEEEEECCC-------------CEEEEEETTTCCEEEEEECCSSCE
T ss_pred CceEEEEECCCCceeeeecCCCCceeEEecCCCceEEEeecCCCceEEEEecCCCcceeEEEecCCCcchhheecccCcE
Confidence 9999999998765432111000 00123345667899999
Q ss_pred ceEEeCCCCCcEEEEEeCCCcEEEEecCCCCCC
Q 014472 378 SDFSWNPCEDWVISSVAEDNILQIWQMAENIYH 410 (424)
Q Consensus 378 ~~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~~ 410 (424)
++++|+|+++ +|++++.||.|+||++..+.+.
T Consensus 319 ~~~~~s~~~~-~l~s~~~dg~v~iw~~~~~~~~ 350 (369)
T 3zwl_B 319 NTVAISPQGT-SYASGGEDGFIRLHHFEKSYFD 350 (369)
T ss_dssp EEEEECTTSS-EEEEEETTSEEEEEEECHHHHT
T ss_pred EEEEECCCCC-EEEEEcCCCeEEEEECccccch
Confidence 9999999999 7999999999999999987543
No 48
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=100.00 E-value=1.6e-36 Score=281.90 Aligned_cols=255 Identities=13% Similarity=0.173 Sum_probs=200.9
Q ss_pred cCCceeEEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCCeeeEEecCCCCceEEEEeCCCcE
Q 014472 124 HDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDDAQI 203 (424)
Q Consensus 124 h~~~v~~i~~~p~~~~~latg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i 203 (424)
|.+.|++++|+|++. +||+|+.||.|+||++.. ........+.+|...|.+++|+|++. +|++++.||.|
T Consensus 10 ~~~~v~~~~~s~~g~-~l~~~~~d~~i~iw~~~~--------~~~~~~~~~~~h~~~v~~~~~s~~~~-~l~s~s~d~~v 79 (377)
T 3dwl_C 10 LPKPSYEHAFNSQRT-EFVTTTATNQVELYEQDG--------NGWKHARTFSDHDKIVTCVDWAPKSN-RIVTCSQDRNA 79 (377)
T ss_dssp CSSCCSCCEECSSSS-EEECCCSSSCBCEEEEET--------TEEEECCCBCCCSSCEEEEEECTTTC-CEEEEETTSSE
T ss_pred CCCcEEEEEECCCCC-EEEEecCCCEEEEEEccC--------CceEEEEEEecCCceEEEEEEeCCCC-EEEEEeCCCeE
Confidence 678999999999887 899999999999999986 21144556788999999999999887 79999999999
Q ss_pred EEEeCCCCCCCCcccceeeeecCCcceeeEEeeCCCCcEEEEEeCCCeEEEEECCCCCCCCCeeEecc-cCCCeeEEEec
Q 014472 204 CLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVA-HQSEVNCLAFN 282 (424)
Q Consensus 204 ~vwd~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~~s~~~dg~i~i~d~~~~~~~~~~~~~~~-~~~~v~~i~~~ 282 (424)
++||+.++. .......+..|...|.+++|+|++. +|++++.|+.|++||++..........+.. |...|++++|+
T Consensus 80 ~vwd~~~~~---~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~ 155 (377)
T 3dwl_C 80 YVYEKRPDG---TWKQTLVLLRLNRAATFVRWSPNED-KFAVGSGARVISVCYFEQENDWWVSKHLKRPLRSTILSLDWH 155 (377)
T ss_dssp EEC---------CCCCEEECCCCSSCEEEEECCTTSS-CCEEEESSSCEEECCC-----CCCCEEECSSCCSCEEEEEEC
T ss_pred EEEEcCCCC---ceeeeeEecccCCceEEEEECCCCC-EEEEEecCCeEEEEEECCcccceeeeEeecccCCCeEEEEEc
Confidence 999998764 1234555677999999999999987 456999999999999998764444666766 99999999999
Q ss_pred CCCCeEEEEEeCCCcEEEEECCCC-----------------CCcceeecCCCCCEEEEEEcCCCCcEEEEEeCCCeEEEe
Q 014472 283 PFNEWILATGSTDKTVKLFDLRKI-----------------STALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVW 345 (424)
Q Consensus 283 ~~~~~~l~~g~~dg~i~iwd~~~~-----------------~~~~~~~~~~~~~v~~~~~sp~~~~~l~s~~~dg~i~iw 345 (424)
|++. +|++|+.|+.|++||++.. +.++..+ .|...|.+++|+|+++ +|++++.||.|++|
T Consensus 156 ~~~~-~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~sp~~~-~l~~~~~d~~i~iw 232 (377)
T 3dwl_C 156 PNNV-LLAAGCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY-PSGGWVHAVGFSPSGN-ALAYAGHDSSVTIA 232 (377)
T ss_dssp TTSS-EEEEEESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC-CCSSSEEEEEECTTSS-CEEEEETTTEEC-C
T ss_pred CCCC-EEEEEeCCCEEEEEEEEecccCCCccccccccccchhhhhhcc-cCCceEEEEEECCCCC-EEEEEeCCCcEEEE
Confidence 9887 6999999999999998621 2345556 8999999999999996 79999999999999
Q ss_pred eCCCCCcccCCCccCCCCCeeeEEEcCCCCCcceEEeCCCCCcEEEEEeCCCcEEEEecCCC
Q 014472 346 DLSRIDEEQTPEDAEDGPPELLFIHGGHTSKISDFSWNPCEDWVISSVAEDNILQIWQMAEN 407 (424)
Q Consensus 346 d~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iw~~~~~ 407 (424)
|+..... ++..+..+.+|...|.+++|+|+++ +|++++.++. .+|+...+
T Consensus 233 d~~~~~~----------~~~~~~~~~~~~~~v~~~~~s~~~~-~l~~~~~~~~-~~~~~~~~ 282 (377)
T 3dwl_C 233 YPSAPEQ----------PPRALITVKLSQLPLRSLLWANESA-IVAAGYNYSP-ILLQGNES 282 (377)
T ss_dssp EECSTTS----------CEEECCCEECSSSCEEEEEEEETTE-EEEEESSSSE-EEECCCC-
T ss_pred ECCCCCC----------cceeeEeecCCCCceEEEEEcCCCC-EEEEEcCCcE-EEEEeCCC
Confidence 9987642 1123556678999999999999998 6888876665 47777643
No 49
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=100.00 E-value=8.5e-35 Score=272.12 Aligned_cols=257 Identities=14% Similarity=0.239 Sum_probs=210.1
Q ss_pred EEeccCCceeEEEecCC----C---CcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEecC-----CCCeeeEEec
Q 014472 120 QQINHDGEVNRARYMPQ----N---PFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGH-----STEGYGLSWS 187 (424)
Q Consensus 120 ~~~~h~~~v~~i~~~p~----~---~~~latg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~h-----~~~v~~l~~~ 187 (424)
....|...|++++|+|+ + . +|++++.||.|++|++....... ......+..| ...|.+++|+
T Consensus 57 ~~~~h~~~v~~~~~~~~~~~~g~~~~-~l~s~~~dg~i~iw~~~~~~~~~-----~~~~~~~~~~~~~~~~~~v~~~~~~ 130 (397)
T 1sq9_A 57 SHFVHKSGLHHVDVLQAIERDAFELC-LVATTSFSGDLLFYRITREDETK-----KVIFEKLDLLDSDMKKHSFWALKWG 130 (397)
T ss_dssp EEECCTTCEEEEEEEEEEETTTEEEE-EEEEEETTSCEEEEEEEECTTTC-----CEEEEEECCSCTTGGGSCEEEEEEE
T ss_pred EEecCCCcEEEEEEecccccCCcccc-EEEEEcCCCCEEEEEccCCcccc-----cccceeecccccccCCCcEEEEEEe
Confidence 34489999999999998 6 5 89999999999999998721100 0115677788 5899999999
Q ss_pred ----CCCCce-EEEEeCCCcEEEEeCCC------CCCCCcccceeee-------ecCCcceeeEEeeCCCCcEEEEEeCC
Q 014472 188 ----KFKEGH-LLSGSDDAQICLWDINA------APKNKSLEAMQIF-------KVHEGVVEDVAWHLRHEYLFGSVGDD 249 (424)
Q Consensus 188 ----~~~~~~-l~s~~~dg~i~vwd~~~------~~~~~~~~~~~~~-------~~~~~~v~~i~~~~~~~~~~~s~~~d 249 (424)
|++. + |++++.||.|++||+.. ..... +.+...+ ..|...|.+++|+|++ ++++++.|
T Consensus 131 ~~~~~~~~-~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--~l~~~~~d 206 (397)
T 1sq9_A 131 ASNDRLLS-HRLVATDVKGTTYIWKFHPFADESNSLTLN-WSPTLELQGTVESPMTPSQFATSVDISERG--LIATGFNN 206 (397)
T ss_dssp CCC----C-EEEEEEETTSCEEEEEEESSSSHHHHTTTC-CCCEEEEEEEECCSSSSCCCCCEEEECTTS--EEEEECTT
T ss_pred eccCCCCc-eEEEEEeCCCcEEEEeCCccccccccceee-ccCcceeeeeeccccCCCCCceEEEECCCc--eEEEEeCC
Confidence 8887 7 99999999999999987 43322 1111244 3488999999999998 67799999
Q ss_pred CeEEEEECCCCCCCCCeeEecc---c---CCCeeEEEecCCCCeEEEEEeCC---CcEEEEECCCCCCcceeecC-----
Q 014472 250 QYLLIWDLRTPSVSKPVQSVVA---H---QSEVNCLAFNPFNEWILATGSTD---KTVKLFDLRKISTALHTFDS----- 315 (424)
Q Consensus 250 g~i~i~d~~~~~~~~~~~~~~~---~---~~~v~~i~~~~~~~~~l~~g~~d---g~i~iwd~~~~~~~~~~~~~----- 315 (424)
|.|++||+++.. .+..+.. | ...|.+++|+|++. +|++++.| |.|++||+++ ..++..+..
T Consensus 207 g~i~i~d~~~~~---~~~~~~~~~~h~~~~~~i~~i~~~~~~~-~l~~~~~d~~~g~i~i~d~~~-~~~~~~~~~~~~~~ 281 (397)
T 1sq9_A 207 GTVQISELSTLR---PLYNFESQHSMINNSNSIRSVKFSPQGS-LLAIAHDSNSFGCITLYETEF-GERIGSLSVPTHSS 281 (397)
T ss_dssp SEEEEEETTTTE---EEEEEECCC---CCCCCEEEEEECSSTT-EEEEEEEETTEEEEEEEETTT-CCEEEEECBC----
T ss_pred CcEEEEECCCCc---eeEEEeccccccccCCccceEEECCCCC-EEEEEecCCCCceEEEEECCC-CcccceeccCcccc
Confidence 999999999865 3667777 8 99999999999988 68899999 9999999998 678888888
Q ss_pred --------CCCCEEEEEEcCCCCcEEEEEeCCCeEEEeeCCCCCcccCCCccCCCCCeeeEEEc------CC--------
Q 014472 316 --------HKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPEDAEDGPPELLFIHG------GH-------- 373 (424)
Q Consensus 316 --------~~~~v~~~~~sp~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~------~h-------- 373 (424)
|...|.+++|+|++. +|++++.||.|++||+... +++..+. +|
T Consensus 282 ~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~dg~i~iwd~~~~--------------~~~~~~~~~~~~~~~~~~~~~g~ 346 (397)
T 1sq9_A 282 QASLGEFAHSSWVMSLSFNDSGE-TLCSAGWDGKLRFWDVKTK--------------ERITTLNMHCDDIEIEEDILAVD 346 (397)
T ss_dssp ----CCBSBSSCEEEEEECSSSS-EEEEEETTSEEEEEETTTT--------------EEEEEEECCGGGCSSGGGCCCBC
T ss_pred cccccccccCCcEEEEEECCCCC-EEEEEeCCCeEEEEEcCCC--------------ceeEEEecccCcccchhhhhccc
Confidence 999999999999996 7999999999999999875 4455566 66
Q ss_pred -------CCCcceEEeCCCC----------CcEEEEEeCCCcEEEEecCCC
Q 014472 374 -------TSKISDFSWNPCE----------DWVISSVAEDNILQIWQMAEN 407 (424)
Q Consensus 374 -------~~~v~~~~~~~~~----------~~~l~s~~~d~~i~iw~~~~~ 407 (424)
...|++++|+|++ + +|++++.||.|++|++.++
T Consensus 347 ~~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~-~l~s~~~dg~i~iw~~~~g 396 (397)
T 1sq9_A 347 EHGDSLAEPGVFDVKFLKKGWRSGMGADLNE-SLCCVCLDRSIRWFREAGG 396 (397)
T ss_dssp TTSCBCSSCCEEEEEEECTTTSBSTTCTTSC-EEEEEETTTEEEEEEEEC-
T ss_pred cccccccCCceeEEEeccccccccccccccc-eEEEecCCCcEEEEEcCCC
Confidence 8999999999998 5 7999999999999999875
No 50
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=100.00 E-value=1.1e-33 Score=258.11 Aligned_cols=247 Identities=16% Similarity=0.237 Sum_probs=208.2
Q ss_pred EEEEEeccCCceeEEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCCeeeEEecCCCCceEEE
Q 014472 117 QIIQQINHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLS 196 (424)
Q Consensus 117 ~~~~~~~h~~~v~~i~~~p~~~~~latg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s 196 (424)
.......|...|.+++|+|++. +|++++.||.|++|++.. ........+..|...|.+++|+|++. +|++
T Consensus 89 ~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~i~~~d~~~--------~~~~~~~~~~~~~~~i~~~~~~~~~~-~l~~ 158 (337)
T 1gxr_A 89 SQLDCLNRDNYIRSCKLLPDGC-TLIVGGEASTLSIWDLAA--------PTPRIKAELTSSAPACYALAISPDSK-VCFS 158 (337)
T ss_dssp EEEECSCTTSBEEEEEECTTSS-EEEEEESSSEEEEEECCC--------C--EEEEEEECSSSCEEEEEECTTSS-EEEE
T ss_pred ecccccCCCCcEEEEEEcCCCC-EEEEEcCCCcEEEEECCC--------CCcceeeecccCCCceEEEEECCCCC-EEEE
Confidence 3334447999999999999886 899999999999999987 22334567788999999999999887 7999
Q ss_pred EeCCCcEEEEeCCCCCCCCcccceeeeecCCcceeeEEeeCCCCcEEEEEeCCCeEEEEECCCCCCCCCeeEecccCCCe
Q 014472 197 GSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEV 276 (424)
Q Consensus 197 ~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v 276 (424)
++.||.|++||++++ ..+..+..|...|.+++|+|++. .+++++.||.|++||+++++. +..+ .+...+
T Consensus 159 ~~~dg~v~~~d~~~~------~~~~~~~~~~~~i~~~~~~~~~~-~l~~~~~dg~i~~~d~~~~~~---~~~~-~~~~~v 227 (337)
T 1gxr_A 159 CCSDGNIAVWDLHNQ------TLVRQFQGHTDGASCIDISNDGT-KLWTGGLDNTVRSWDLREGRQ---LQQH-DFTSQI 227 (337)
T ss_dssp EETTSCEEEEETTTT------EEEEEECCCSSCEEEEEECTTSS-EEEEEETTSEEEEEETTTTEE---EEEE-ECSSCE
T ss_pred EeCCCcEEEEeCCCC------ceeeeeecccCceEEEEECCCCC-EEEEEecCCcEEEEECCCCce---Eeee-cCCCce
Confidence 999999999999865 34566778999999999999986 566999999999999998653 3333 478899
Q ss_pred eEEEecCCCCeEEEEEeCCCcEEEEECCCCCCcceeecCCCCCEEEEEEcCCCCcEEEEEeCCCeEEEeeCCCCCcccCC
Q 014472 277 NCLAFNPFNEWILATGSTDKTVKLFDLRKISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTP 356 (424)
Q Consensus 277 ~~i~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~s~~~dg~i~iwd~~~~~~~~~~ 356 (424)
.+++|+|++. +|++++.++.|++||++.. ....+..|...|.+++|+|+++ +|++++.||.|++||+..+.
T Consensus 228 ~~~~~s~~~~-~l~~~~~~~~i~~~~~~~~--~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~dg~i~~~~~~~~~----- 298 (337)
T 1gxr_A 228 FSLGYCPTGE-WLAVGMESSNVEVLHVNKP--DKYQLHLHESCVLSLKFAYCGK-WFVSTGKDNLLNAWRTPYGA----- 298 (337)
T ss_dssp EEEEECTTSS-EEEEEETTSCEEEEETTSS--CEEEECCCSSCEEEEEECTTSS-EEEEEETTSEEEEEETTTCC-----
T ss_pred EEEEECCCCC-EEEEEcCCCcEEEEECCCC--CeEEEcCCccceeEEEECCCCC-EEEEecCCCcEEEEECCCCe-----
Confidence 9999999998 6899999999999999973 3457788999999999999996 79999999999999998753
Q ss_pred CccCCCCCeeeEEEcCCCCCcceEEeCCCCCcEEEEEeCCCcEEEEec
Q 014472 357 EDAEDGPPELLFIHGGHTSKISDFSWNPCEDWVISSVAEDNILQIWQM 404 (424)
Q Consensus 357 ~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iw~~ 404 (424)
.+.. ..|...|.+++|+|+++ +|++++.||.|++|++
T Consensus 299 ---------~~~~-~~~~~~v~~~~~s~~~~-~l~~~~~dg~i~iw~~ 335 (337)
T 1gxr_A 299 ---------SIFQ-SKESSSVLSCDISVDDK-YIVTGSGDKKATVYEV 335 (337)
T ss_dssp ---------EEEE-EECSSCEEEEEECTTSC-EEEEEETTSCEEEEEE
T ss_pred ---------EEEE-ecCCCcEEEEEECCCCC-EEEEecCCCeEEEEEE
Confidence 2222 34778899999999999 6899999999999997
No 51
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.9e-34 Score=270.46 Aligned_cols=243 Identities=17% Similarity=0.296 Sum_probs=209.3
Q ss_pred ccCCceeEEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCCeeeEEecCCCCceEEEEeCCCc
Q 014472 123 NHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDDAQ 202 (424)
Q Consensus 123 ~h~~~v~~i~~~p~~~~~latg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~ 202 (424)
.|.+.|++++|+|++. +||+|+.||.|++|+.. ......+.+|...|.+++|+|++. +|++++.||.
T Consensus 106 ~~~~~v~~~~~s~~~~-~l~~~~~dg~i~i~~~~-----------~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~ 172 (425)
T 1r5m_A 106 KTTNQVTCLAWSHDGN-SIVTGVENGELRLWNKT-----------GALLNVLNFHRAPIVSVKWNKDGT-HIISMDVENV 172 (425)
T ss_dssp --CBCEEEEEECTTSS-EEEEEETTSCEEEEETT-----------SCEEEEECCCCSCEEEEEECTTSS-EEEEEETTCC
T ss_pred CCCCceEEEEEcCCCC-EEEEEeCCCeEEEEeCC-----------CCeeeeccCCCccEEEEEECCCCC-EEEEEecCCe
Confidence 3678999999999886 89999999999999943 355677889999999999999887 7999999999
Q ss_pred EEEEeCCCCCCCCcccceeeeecCCcc---------------eeeEEeeCCCCcEEEEEeCCCeEEEEECCCCCCCCCee
Q 014472 203 ICLWDINAAPKNKSLEAMQIFKVHEGV---------------VEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQ 267 (424)
Q Consensus 203 i~vwd~~~~~~~~~~~~~~~~~~~~~~---------------v~~i~~~~~~~~~~~s~~~dg~i~i~d~~~~~~~~~~~ 267 (424)
|++||+.++. .+..+..+... +.+++|+|++ .+++++.+|.|++||+++.. .+.
T Consensus 173 i~iwd~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~g~i~~~d~~~~~---~~~ 241 (425)
T 1r5m_A 173 TILWNVISGT------VMQHFELKETGGSSINAENHSGDGSLGVDVEWVDDD--KFVIPGPKGAIFVYQITEKT---PTG 241 (425)
T ss_dssp EEEEETTTTE------EEEEECCC---------------CCCBSCCEEEETT--EEEEECGGGCEEEEETTCSS---CSE
T ss_pred EEEEECCCCc------EEEEeeccccCccceeeccccCCcceeeEEEEcCCC--EEEEEcCCCeEEEEEcCCCc---eee
Confidence 9999997763 34444555555 9999999975 46689999999999999865 366
Q ss_pred EecccCCCeeEEEecCCCCeEEEEEeCCCcEEEEECCCCCCcceeecCCCCCEEEEEEcCCCCcEEEEEeCCCeEEEeeC
Q 014472 268 SVVAHQSEVNCLAFNPFNEWILATGSTDKTVKLFDLRKISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDL 347 (424)
Q Consensus 268 ~~~~~~~~v~~i~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~s~~~dg~i~iwd~ 347 (424)
.+..|...|.+++|+|++. +|++++.||.|++||++. ..++..+..|...|.+++|+|++ +|++++.|+.|++||+
T Consensus 242 ~~~~~~~~i~~~~~~~~~~-~l~~~~~d~~i~i~d~~~-~~~~~~~~~~~~~i~~~~~~~~~--~l~~~~~d~~i~i~d~ 317 (425)
T 1r5m_A 242 KLIGHHGPISVLEFNDTNK-LLLSASDDGTLRIWHGGN-GNSQNCFYGHSQSIVSASWVGDD--KVISCSMDGSVRLWSL 317 (425)
T ss_dssp EECCCSSCEEEEEEETTTT-EEEEEETTSCEEEECSSS-BSCSEEECCCSSCEEEEEEETTT--EEEEEETTSEEEEEET
T ss_pred eeccCCCceEEEEECCCCC-EEEEEcCCCEEEEEECCC-CccceEecCCCccEEEEEECCCC--EEEEEeCCCcEEEEEC
Confidence 7778999999999999988 699999999999999998 67888899999999999999988 7899999999999999
Q ss_pred CCCCcccCCCccCCCCCeeeEEEcCCCCCcceEEeCCCCCcEEEEEeCCCcEEEEecCCCC
Q 014472 348 SRIDEEQTPEDAEDGPPELLFIHGGHTSKISDFSWNPCEDWVISSVAEDNILQIWQMAENI 408 (424)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~ 408 (424)
+.. ..+..+..|...|.+++|+|+++ +|++++.||.|++|++.++.
T Consensus 318 ~~~--------------~~~~~~~~~~~~i~~~~~s~~~~-~l~~~~~dg~i~i~~~~~~~ 363 (425)
T 1r5m_A 318 KQN--------------TLLALSIVDGVPIFAGRISQDGQ-KYAVAFMDGQVNVYDLKKLN 363 (425)
T ss_dssp TTT--------------EEEEEEECTTCCEEEEEECTTSS-EEEEEETTSCEEEEECHHHH
T ss_pred CCC--------------cEeEecccCCccEEEEEEcCCCC-EEEEEECCCeEEEEECCCCc
Confidence 874 56777788999999999999999 79999999999999998654
No 52
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=100.00 E-value=8.8e-34 Score=258.81 Aligned_cols=257 Identities=21% Similarity=0.293 Sum_probs=215.6
Q ss_pred cEEEEEEeccCCceeEEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEe--cCCCCeeeEEecCCCCc
Q 014472 115 KVQIIQQINHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLR--GHSTEGYGLSWSKFKEG 192 (424)
Q Consensus 115 ~~~~~~~~~h~~~v~~i~~~p~~~~~latg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~--~h~~~v~~l~~~~~~~~ 192 (424)
.........|.+.|++++|+|++. +|++++ ||.|++|++.... .......+. +|...|.+++|+|++.
T Consensus 41 ~~~~~~~~~h~~~v~~~~~~~~~~-~l~~~~-dg~i~iw~~~~~~-------~~~~~~~~~~~~~~~~v~~~~~~~~~~- 110 (337)
T 1gxr_A 41 HARQINTLNHGEVVCAVTISNPTR-HVYTGG-KGCVKVWDISHPG-------NKSPVSQLDCLNRDNYIRSCKLLPDGC- 110 (337)
T ss_dssp EEEEEEEECCSSCCCEEEECSSSS-EEEEEC-BSEEEEEETTSTT-------CCSCSEEEECSCTTSBEEEEEECTTSS-
T ss_pred ccccceeccCCCceEEEEEecCCc-EEEEcC-CCeEEEEECCCCC-------ceeeeecccccCCCCcEEEEEEcCCCC-
Confidence 445566779999999999999887 788888 9999999998621 122334444 7899999999999887
Q ss_pred eEEEEeCCCcEEEEeCCCCCCCCcccceeeeecCCcceeeEEeeCCCCcEEEEEeCCCeEEEEECCCCCCCCCeeEeccc
Q 014472 193 HLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAH 272 (424)
Q Consensus 193 ~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~~s~~~dg~i~i~d~~~~~~~~~~~~~~~~ 272 (424)
+|++++.||.|++||+.++.. .....+..|...|.+++|+|++. ++++++.||.|++||+++++ .+..+..|
T Consensus 111 ~l~~~~~d~~i~~~d~~~~~~----~~~~~~~~~~~~i~~~~~~~~~~-~l~~~~~dg~v~~~d~~~~~---~~~~~~~~ 182 (337)
T 1gxr_A 111 TLIVGGEASTLSIWDLAAPTP----RIKAELTSSAPACYALAISPDSK-VCFSCCSDGNIAVWDLHNQT---LVRQFQGH 182 (337)
T ss_dssp EEEEEESSSEEEEEECCCC------EEEEEEECSSSCEEEEEECTTSS-EEEEEETTSCEEEEETTTTE---EEEEECCC
T ss_pred EEEEEcCCCcEEEEECCCCCc----ceeeecccCCCceEEEEECCCCC-EEEEEeCCCcEEEEeCCCCc---eeeeeecc
Confidence 799999999999999987632 23455677899999999999886 56699999999999999865 36777889
Q ss_pred CCCeeEEEecCCCCeEEEEEeCCCcEEEEECCCCCCcceeecCCCCCEEEEEEcCCCCcEEEEEeCCCeEEEeeCCCCCc
Q 014472 273 QSEVNCLAFNPFNEWILATGSTDKTVKLFDLRKISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDE 352 (424)
Q Consensus 273 ~~~v~~i~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~s~~~dg~i~iwd~~~~~~ 352 (424)
...|.+++|+|++. +|++++.||.|++||+++ ...+..+. +...+.+++|+|++. +|++++.|+.|++||+....
T Consensus 183 ~~~i~~~~~~~~~~-~l~~~~~dg~i~~~d~~~-~~~~~~~~-~~~~v~~~~~s~~~~-~l~~~~~~~~i~~~~~~~~~- 257 (337)
T 1gxr_A 183 TDGASCIDISNDGT-KLWTGGLDNTVRSWDLRE-GRQLQQHD-FTSQIFSLGYCPTGE-WLAVGMESSNVEVLHVNKPD- 257 (337)
T ss_dssp SSCEEEEEECTTSS-EEEEEETTSEEEEEETTT-TEEEEEEE-CSSCEEEEEECTTSS-EEEEEETTSCEEEEETTSSC-
T ss_pred cCceEEEEECCCCC-EEEEEecCCcEEEEECCC-CceEeeec-CCCceEEEEECCCCC-EEEEEcCCCcEEEEECCCCC-
Confidence 99999999999987 689999999999999998 56655554 688999999999996 78999999999999998742
Q ss_pred ccCCCccCCCCCeeeEEEcCCCCCcceEEeCCCCCcEEEEEeCCCcEEEEecCCCCC
Q 014472 353 EQTPEDAEDGPPELLFIHGGHTSKISDFSWNPCEDWVISSVAEDNILQIWQMAENIY 409 (424)
Q Consensus 353 ~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~ 409 (424)
.....+|...|.+++|+|+++ +|++++.||.|++|++.++..
T Consensus 258 --------------~~~~~~~~~~v~~~~~~~~~~-~l~~~~~dg~i~~~~~~~~~~ 299 (337)
T 1gxr_A 258 --------------KYQLHLHESCVLSLKFAYCGK-WFVSTGKDNLLNAWRTPYGAS 299 (337)
T ss_dssp --------------EEEECCCSSCEEEEEECTTSS-EEEEEETTSEEEEEETTTCCE
T ss_pred --------------eEEEcCCccceeEEEECCCCC-EEEEecCCCcEEEEECCCCeE
Confidence 345678999999999999999 689999999999999987643
No 53
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=100.00 E-value=1.8e-34 Score=267.27 Aligned_cols=307 Identities=16% Similarity=0.171 Sum_probs=230.8
Q ss_pred CCccEEEEccCCCCCCCCCCceEEEEEeecCCCCCCCeEEEEEEEcCCCCCCcccCCCCCcCCCCCCCCCCCCcEEEEEE
Q 014472 42 WPSLTVEWLPDREEPPGKDYSVQKMILGTHTSENEPNYLMLAQVQLPLDDSENDARHYDDDRSDFGGFGCANGKVQIIQQ 121 (424)
Q Consensus 42 ~p~~~~~~~p~~~~~~~~~~~~~~~~~gt~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 121 (424)
-|..++.|.|+. ..++.|+ .++.++++.+.- ++++....
T Consensus 9 ~~i~~~~~s~~~----------~~l~~~~-----~d~~v~i~~~~~--------------------------~~~~~~~~ 47 (372)
T 1k8k_C 9 EPISCHAWNKDR----------TQIAICP-----NNHEVHIYEKSG--------------------------NKWVQVHE 47 (372)
T ss_dssp SCCCEEEECTTS----------SEEEEEC-----SSSEEEEEEEET--------------------------TEEEEEEE
T ss_pred CCeEEEEECCCC----------CEEEEEe-----CCCEEEEEeCCC--------------------------CcEEeeee
Confidence 357789999875 4566654 356788887631 12223333
Q ss_pred -eccCCceeEEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCCeeeEEecCCCCceEEEEeCC
Q 014472 122 -INHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDD 200 (424)
Q Consensus 122 -~~h~~~v~~i~~~p~~~~~latg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~d 200 (424)
..|.+.|++++|+|++. +|++|+.||.|++||+.. ........+..|...|.+++|+|++. +|++++.|
T Consensus 48 ~~~h~~~v~~~~~~~~~~-~l~~~~~dg~i~vwd~~~--------~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~d 117 (372)
T 1k8k_C 48 LKEHNGQVTGVDWAPDSN-RIVTCGTDRNAYVWTLKG--------RTWKPTLVILRINRAARCVRWAPNEK-KFAVGSGS 117 (372)
T ss_dssp EECCSSCEEEEEEETTTT-EEEEEETTSCEEEEEEET--------TEEEEEEECCCCSSCEEEEEECTTSS-EEEEEETT
T ss_pred ecCCCCcccEEEEeCCCC-EEEEEcCCCeEEEEECCC--------CeeeeeEEeecCCCceeEEEECCCCC-EEEEEeCC
Confidence 36999999999999886 899999999999999976 22233444567999999999999887 79999999
Q ss_pred CcEEEEeCCCCCCCCcccceeeeecCCcceeeEEeeCCCCcEEEEEeCCCeEEEEECCCCC---------------CCCC
Q 014472 201 AQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPS---------------VSKP 265 (424)
Q Consensus 201 g~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~~s~~~dg~i~i~d~~~~~---------------~~~~ 265 (424)
|.|++||+....... ........|...|.+++|+|++. +|++++.||.|++||++... ....
T Consensus 118 ~~v~i~d~~~~~~~~--~~~~~~~~~~~~i~~~~~~~~~~-~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~ 194 (372)
T 1k8k_C 118 RVISICYFEQENDWW--VCKHIKKPIRSTVLSLDWHPNSV-LLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGEL 194 (372)
T ss_dssp SSEEEEEEETTTTEE--EEEEECTTCCSCEEEEEECTTSS-EEEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCE
T ss_pred CEEEEEEecCCCcce--eeeeeecccCCCeeEEEEcCCCC-EEEEEcCCCCEEEEEcccccccccccccccccccchhhh
Confidence 999999998763211 01222356889999999999886 56799999999999975211 1234
Q ss_pred eeEecccCCCeeEEEecCCCCeEEEEEeCCCcEEEEECCCCCCcceeecCCCCCEEEEEEcCCCCcEEEEEeCCCeEEEe
Q 014472 266 VQSVVAHQSEVNCLAFNPFNEWILATGSTDKTVKLFDLRKISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVW 345 (424)
Q Consensus 266 ~~~~~~~~~~v~~i~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~s~~~dg~i~iw 345 (424)
+..+..|...|++++|+|++. +|++++.||.|++||+++ +.++..+..|...|.+++|+|++. +|+++ .|+.|++|
T Consensus 195 ~~~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~i~i~d~~~-~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~-~d~~i~i~ 270 (372)
T 1k8k_C 195 MFESSSSCGWVHGVCFSANGS-RVAWVSHDSTVCLADADK-KMAVATLASETLPLLAVTFITESS-LVAAG-HDCFPVLF 270 (372)
T ss_dssp EEECCCCSSCEEEEEECSSSS-EEEEEETTTEEEEEEGGG-TTEEEEEECSSCCEEEEEEEETTE-EEEEE-TTSSCEEE
T ss_pred eEecCCCCCeEEEEEECCCCC-EEEEEeCCCEEEEEECCC-CceeEEEccCCCCeEEEEEecCCC-EEEEE-eCCeEEEE
Confidence 666778999999999999987 699999999999999998 678889999999999999999985 67666 89999999
Q ss_pred eCCC--CC--cccCCCccC----------------CCCCee-------eEEEcCCCCCcceEEeC-CCC---CcEEEEEe
Q 014472 346 DLSR--ID--EEQTPEDAE----------------DGPPEL-------LFIHGGHTSKISDFSWN-PCE---DWVISSVA 394 (424)
Q Consensus 346 d~~~--~~--~~~~~~~~~----------------~~~~~~-------~~~~~~h~~~v~~~~~~-~~~---~~~l~s~~ 394 (424)
++.. +. ......... +..... .....+|...|++++|+ +++ . +|+|++
T Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~g~~~~-~l~s~~ 349 (372)
T 1k8k_C 271 TYDSAAGKLSFGGRLDVPKQSSQRGLTARERFQNLDKKASSEGSAAAGAGLDSLHKNSVSQISVLSGGKAKCS-QFCTTG 349 (372)
T ss_dssp EEETTTTEEEECCCCCCC--------CHHHHHHHCCCCC---------CCCSSSSSSCEEEEEEEESTTTSCS-EEEEEE
T ss_pred EccCcCceEEEeeccCccccchhhhcchhhhhhhcccccccccCccccccccccccCCcceeEEecCCCccee-eEEEec
Confidence 9987 31 000000000 000011 11225899999999977 555 6 799999
Q ss_pred CCCcEEEEecCCC
Q 014472 395 EDNILQIWQMAEN 407 (424)
Q Consensus 395 ~d~~i~iw~~~~~ 407 (424)
.||.|++|++.++
T Consensus 350 ~Dg~i~~W~~~~~ 362 (372)
T 1k8k_C 350 MDGGMSIWDVRSL 362 (372)
T ss_dssp TTSEEEEEEHHHH
T ss_pred CCCceEEEEecCh
Confidence 9999999999764
No 54
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=100.00 E-value=5.2e-34 Score=280.08 Aligned_cols=242 Identities=26% Similarity=0.454 Sum_probs=212.2
Q ss_pred EeccCCceeEEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCCeeeEEecCCCCceEEEEeCC
Q 014472 121 QINHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDD 200 (424)
Q Consensus 121 ~~~h~~~v~~i~~~p~~~~~latg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~d 200 (424)
..+|.+.|.+++|+|++. +|++++.||.|++|+... .....+.+|...+.+++|+|++. +|++++.|
T Consensus 299 ~~~h~~~v~~~~~~~~~~-~l~t~~~d~~i~~w~~~~-----------~~~~~~~~~~~~v~~~~~s~~g~-~l~~~~~d 365 (577)
T 2ymu_A 299 LTGHSSSVWGVAFSPDGQ-TIASASDDKTVKLWNRNG-----------QHLQTLTGHSSSVWGVAFSPDGQ-TIASASDD 365 (577)
T ss_dssp ECCCSSCEEEEEECTTSS-EEEEEETTSCEEEEETTS-----------CEEEEECCCSSCEEEEEECTTSS-EEEEEETT
T ss_pred EecCCCCeEEEEECCCCC-EEEEEeCCCeEEEEeCCC-----------CeeEEEeCCCCCEEEEEECCCCC-EEEEEeCC
Confidence 457999999999999887 899999999999999765 34567888999999999999988 79999999
Q ss_pred CcEEEEeCCCCCCCCcccceeeeecCCcceeeEEeeCCCCcEEEEEeCCCeEEEEECCCCCCCCCeeEecccCCCeeEEE
Q 014472 201 AQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLA 280 (424)
Q Consensus 201 g~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~ 280 (424)
|.|++||... ..+..+.+|...|.+++|+|+++. |++++.|+.|++||... +.+..+..|...|++++
T Consensus 366 g~v~~~~~~~-------~~~~~~~~~~~~v~~~~~s~dg~~-l~~~~~d~~v~~~~~~~----~~~~~~~~~~~~v~~~~ 433 (577)
T 2ymu_A 366 KTVKLWNRNG-------QLLQTLTGHSSSVRGVAFSPDGQT-IASASDDKTVKLWNRNG----QLLQTLTGHSSSVWGVA 433 (577)
T ss_dssp SEEEEEETTC-------CEEEEEECCSSCEEEEEECTTSSC-EEEEETTSEEEEECTTC----CEEEEEECCSSCEEEEE
T ss_pred CEEEEEcCCC-------CEEEEecCCCCCeEEEEECCCCCE-EEEEeCCCEEEEEeCCC----CEEEEecCCCCCeEEEE
Confidence 9999999643 245667789999999999999975 56999999999999643 24677889999999999
Q ss_pred ecCCCCeEEEEEeCCCcEEEEECCCCCCcceeecCCCCCEEEEEEcCCCCcEEEEEeCCCeEEEeeCCCCCcccCCCccC
Q 014472 281 FNPFNEWILATGSTDKTVKLFDLRKISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPEDAE 360 (424)
Q Consensus 281 ~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~ 360 (424)
|+|++. +|++++.|+.|++||+. ++.+..+.+|...|++++|+|+++ +|++++.|+.|++||...
T Consensus 434 ~s~d~~-~l~~~~~d~~v~~w~~~--~~~~~~~~~~~~~v~~~~~spd~~-~las~~~d~~i~iw~~~~----------- 498 (577)
T 2ymu_A 434 FSPDDQ-TIASASDDKTVKLWNRN--GQLLQTLTGHSSSVRGVAFSPDGQ-TIASASDDKTVKLWNRNG----------- 498 (577)
T ss_dssp ECTTSS-EEEEEETTSEEEEEETT--SCEEEEEECCSSCEEEEEECTTSC-EEEEEETTSEEEEEETTS-----------
T ss_pred ECCCCC-EEEEEcCCCEEEEEECC--CCEEEEEcCCCCCEEEEEEcCCCC-EEEEEeCCCEEEEEcCCC-----------
Confidence 999998 69999999999999975 577888999999999999999996 799999999999999643
Q ss_pred CCCCeeeEEEcCCCCCcceEEeCCCCCcEEEEEeCCCcEEEEecCCC
Q 014472 361 DGPPELLFIHGGHTSKISDFSWNPCEDWVISSVAEDNILQIWQMAEN 407 (424)
Q Consensus 361 ~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iw~~~~~ 407 (424)
+++..+.+|...|++++|+|+++ +|++++.|+.|+|||....
T Consensus 499 ----~~~~~~~~h~~~v~~l~~s~dg~-~l~s~~~dg~v~lwd~~~~ 540 (577)
T 2ymu_A 499 ----QLLQTLTGHSSSVRGVAFSPDGQ-TIASASDDKTVKLWNRNGQ 540 (577)
T ss_dssp ----CEEEEEECCSSCEEEEEECTTSS-CEEEEETTSEEEEECTTSC
T ss_pred ----CEEEEEeCCCCCEEEEEEcCCCC-EEEEEECcCEEEEEeCCCC
Confidence 56778889999999999999999 5899999999999997543
No 55
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=100.00 E-value=3.2e-35 Score=271.74 Aligned_cols=308 Identities=13% Similarity=0.126 Sum_probs=218.5
Q ss_pred hcCCCCCccEEEEccCCCCCCCCCCceEEEEEeec--CCCCCCCeEEEEEEEcCCCCCCcccCCCCCcCCCCCCCCCCCC
Q 014472 37 THALEWPSLTVEWLPDREEPPGKDYSVQKMILGTH--TSENEPNYLMLAQVQLPLDDSENDARHYDDDRSDFGGFGCANG 114 (424)
Q Consensus 37 ~~~~~~p~~~~~~~p~~~~~~~~~~~~~~~~~gt~--~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 114 (424)
.+.+.+|.++++|.|+. +.++.|.. +..+.+|.|.++.+......... ...
T Consensus 10 ~~~~g~PV~sv~fs~dg----------~~l~sGGg~~~~sGi~N~i~~w~~~~~~~~~~~-----------------~~~ 62 (365)
T 4h5i_A 10 SYNVGYPAYGAKFLNND----------TLLVAGGGGEGNNGIPNKLTVLRVDPTKDTEKE-----------------QFH 62 (365)
T ss_dssp EEECSSCEEEEEEEETT----------EEEEEEECCSSSSSCCEEEEEEEECTTSSSHHH-----------------HEE
T ss_pred ecCCCCCEEEEEEeCCC----------cEEEEECCCccccCCCCEEEEEEEcCCCcceee-----------------eee
Confidence 45678999999999986 56666653 22345788999988532110000 000
Q ss_pred cEEEEEEeccCCceeEEEecCCCCcEEEEE-----------ecCCeEEEEeCCCCCCCCCCCCCCCCcEE-----EecCC
Q 014472 115 KVQIIQQINHDGEVNRARYMPQNPFLIATK-----------TVSAEVYVFDYSKHPSKPPLDGACSPDLR-----LRGHS 178 (424)
Q Consensus 115 ~~~~~~~~~h~~~v~~i~~~p~~~~~latg-----------~~dg~v~iwd~~~~~~~~~~~~~~~~~~~-----~~~h~ 178 (424)
.......-.|...|.++++.+ . ++++| +.|+.+++|++...... ...... ...+.
T Consensus 63 ~~~~~~l~~~~~~v~s~~~~~--~-~~~~g~~~~~~~l~s~~~d~~~r~~~~~~~~~~------~~~~~~~~~~~~~~~~ 133 (365)
T 4h5i_A 63 ILSEFALEDNDDSPTAIDASK--G-IILVGCNENSTKITQGKGNKHLRKFKYDKVNDQ------LEFLTSVDFDASTNAD 133 (365)
T ss_dssp EEEEEECCTTSCCCCEEEEET--T-EEEEECCCCHHHHHHTSCCCCEEEEEEETTTTE------EEEEEEECSSCCCCTT
T ss_pred eeeEEEccCCCCceEEEEeCC--C-EEEEEECCCccEEEEecCCCcEEEEEecCCCce------EEEeeeeceeecCCcc
Confidence 111122335778888888764 2 45544 45788999998762111 111111 12244
Q ss_pred CCeeeEEecCCCCceEE--EEeCCCcEEEEeCCCCCCCCcccceeeeecCCcceeeEEeeCCCCcEEEEEeCCCeEEEEE
Q 014472 179 TEGYGLSWSKFKEGHLL--SGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWD 256 (424)
Q Consensus 179 ~~v~~l~~~~~~~~~l~--s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~~s~~~dg~i~i~d 256 (424)
..+.+++|+|+|. +|+ +++.|++|+|||+.++. .+..+. |...|.+++|+|++. ++++++.+ .+++|+
T Consensus 134 ~~~~~v~fSpDg~-~la~as~~~d~~i~iwd~~~~~------~~~~~~-~~~~V~~v~fspdg~-~l~s~s~~-~~~~~~ 203 (365)
T 4h5i_A 134 DYTKLVYISREGT-VAAIASSKVPAIMRIIDPSDLT------EKFEIE-TRGEVKDLHFSTDGK-VVAYITGS-SLEVIS 203 (365)
T ss_dssp CCEEEEEECTTSS-CEEEEESCSSCEEEEEETTTTE------EEEEEE-CSSCCCEEEECTTSS-EEEEECSS-CEEEEE
T ss_pred cCEEEEEEcCCCC-EEEEEECCCCCEEEEeECCCCc------EEEEeC-CCCceEEEEEccCCc-eEEeccce-eEEEEE
Confidence 5688999999998 554 45579999999998763 333343 778899999999997 55677754 566777
Q ss_pred CCCCCCCCCeeEecccCCCeeEEEecCCCCeEEEEEeCCC----cEEEEECCCCCC---cceeecCCCCCEEEEEEcCCC
Q 014472 257 LRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATGSTDK----TVKLFDLRKIST---ALHTFDSHKEEVFQVGWNPKN 329 (424)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~l~~g~~dg----~i~iwd~~~~~~---~~~~~~~~~~~v~~~~~sp~~ 329 (424)
..++.. ........|...|.+++|+|++. ++++++.|+ .+++||+..... ....+..|...|++++|+|++
T Consensus 204 ~~~~~~-~~~~~~~~~~~~v~~v~fspdg~-~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg 281 (365)
T 4h5i_A 204 TVTGSC-IARKTDFDKNWSLSKINFIADDT-VLIAASLKKGKGIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDMKG 281 (365)
T ss_dssp TTTCCE-EEEECCCCTTEEEEEEEEEETTE-EEEEEEESSSCCEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECTTS
T ss_pred eccCcc-eeeeecCCCCCCEEEEEEcCCCC-EEEEEecCCcceeEEeecccccceecceeeeeecCCCCCeEeEEECCCC
Confidence 666543 11123356788999999999998 577887776 688899876322 234567899999999999999
Q ss_pred CcEEEEEeCCCeEEEeeCCCCCcccCCCccCCCCCeeeEE-EcCCCCCcceEEeCCCCCcEEEEEeCCCcEEEEecCCCC
Q 014472 330 ETILASCCLGRRLMVWDLSRIDEEQTPEDAEDGPPELLFI-HGGHTSKISDFSWNPCEDWVISSVAEDNILQIWQMAENI 408 (424)
Q Consensus 330 ~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~-~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~ 408 (424)
+ +||+|+.|++|+|||+.++ +++.. ..+|...|++++|+|+++ +|+|+|.|++|+||++..+.
T Consensus 282 ~-~lasgs~D~~V~iwd~~~~--------------~~~~~~~~gH~~~V~~v~fSpdg~-~laS~S~D~tvrvw~ip~~~ 345 (365)
T 4h5i_A 282 E-LAVLASNDNSIALVKLKDL--------------SMSKIFKQAHSFAITEVTISPDST-YVASVSAANTIHIIKLPLNY 345 (365)
T ss_dssp C-EEEEEETTSCEEEEETTTT--------------EEEEEETTSSSSCEEEEEECTTSC-EEEEEETTSEEEEEECCTTT
T ss_pred C-ceEEEcCCCEEEEEECCCC--------------cEEEEecCcccCCEEEEEECCCCC-EEEEEeCCCeEEEEEcCCCC
Confidence 6 8999999999999999875 55555 479999999999999999 79999999999999997653
No 56
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=100.00 E-value=1.2e-33 Score=266.47 Aligned_cols=258 Identities=22% Similarity=0.421 Sum_probs=215.5
Q ss_pred CCcEE-EEEEeccCCceeEEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCCeeeEEecCCCC
Q 014472 113 NGKVQ-IIQQINHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKE 191 (424)
Q Consensus 113 ~~~~~-~~~~~~h~~~v~~i~~~p~~~~~latg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~ 191 (424)
.+++. ++..-.|...|++|+|+|++. +||+|+.||.|+|||+.+ .+....+.+|...+.+++|++ .
T Consensus 134 tg~~~~~~~~~~~~~~V~sv~fspdg~-~lasgs~Dg~v~iWd~~~----------~~~~~~~~~h~~~v~~~s~~~--~ 200 (420)
T 4gga_A 134 SGDILQLLQMEQPGEYISSVAWIKEGN-YLAVGTSSAEVQLWDVQQ----------QKRLRNMTSHSARVGSLSWNS--Y 200 (420)
T ss_dssp TCCEEEEEECCSTTCCEEEEEECTTSS-EEEEEETTSCEEEEETTT----------TEEEEEECCCSSCEEEEEEET--T
T ss_pred CCCEEEEEEecCCCCcEEEEEECCCCC-EEEEEECCCeEEEEEcCC----------CcEEEEEeCCCCceEEEeeCC--C
Confidence 34433 333346888999999999987 899999999999999987 566788899999999999864 3
Q ss_pred ceEEEEeCCCcEEEEeCCCCCCCCcccceeeeecCCcceeeEEeeCCCCcEEEEEeCCCeEEEEECCCCCC-CCCeeEec
Q 014472 192 GHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSV-SKPVQSVV 270 (424)
Q Consensus 192 ~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~~s~~~dg~i~i~d~~~~~~-~~~~~~~~ 270 (424)
+|++|+.|+.+++||..... ..+..+.+|...+..+.|+|++. .+++++.|+.+++||.+.++. ...+....
T Consensus 201 -~l~sgs~d~~i~~~d~~~~~-----~~~~~~~~h~~~~~~~~~~~~g~-~l~s~~~D~~v~i~~~~~~~~~~~~~~~~~ 273 (420)
T 4gga_A 201 -ILSSGSRSGHIHHHDVRVAE-----HHVATLSGHSQEVCGLRWAPDGR-HLASGGNDNLVNVWPSAPGEGGWVPLQTFT 273 (420)
T ss_dssp -EEEEEETTSEEEEEETTSSS-----CEEEEEECCSSCEEEEEECTTSS-EEEEEETTSCEEEEESSCCSSCSCCSEEEC
T ss_pred -EEEEEeCCCceeEeeecccc-----eeeEEecccccceeeeeecCCCC-eeeeeeccccceEEeeccccccceeeeeec
Confidence 79999999999999987643 24566788999999999999987 567999999999999987653 23456677
Q ss_pred ccCCCeeEEEecCCCCeEEEEE--eCCCcEEEEECCCCCCcceeecCCCCCEEEEEEcCCCCcEEEEE-eCCCeEEEeeC
Q 014472 271 AHQSEVNCLAFNPFNEWILATG--STDKTVKLFDLRKISTALHTFDSHKEEVFQVGWNPKNETILASC-CLGRRLMVWDL 347 (424)
Q Consensus 271 ~~~~~v~~i~~~~~~~~~l~~g--~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~s~-~~dg~i~iwd~ 347 (424)
.|...|.+++|+|.+..+++++ +.|++|++||+++ +.++..+.. ...+.++.|+|++..+++++ +.|+.|+|||+
T Consensus 274 ~~~~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t-~~~~~~~~~-~~~v~~~~~~~~~~~lv~~sg~~d~~I~iwd~ 351 (420)
T 4gga_A 274 QHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCS-GACLSAVDA-HSQVCSILWSPHYKELISGHGFAQNQLVIWKY 351 (420)
T ss_dssp CCSSCEEEEEECTTCTTEEEEEECTTTCEEEEEETTT-TEEEEEEEC-SSCEEEEEEETTTTEEEEEECTTTCCEEEEET
T ss_pred ccCCceeeeeeCCCcccEEEEEeecCCCEEEEEeCCc-cccceeecc-ccceeeeeecCCCCeEEEEEecCCCEEEEEEC
Confidence 8999999999999988888765 4799999999998 677777765 46799999999997544443 36999999999
Q ss_pred CCCCcccCCCccCCCCCeeeEEEcCCCCCcceEEeCCCCCcEEEEEeCCCcEEEEecCCC
Q 014472 348 SRIDEEQTPEDAEDGPPELLFIHGGHTSKISDFSWNPCEDWVISSVAEDNILQIWQMAEN 407 (424)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iw~~~~~ 407 (424)
.++ +++..+.+|...|++++|+|+++ +|+||+.|++|+|||+.+.
T Consensus 352 ~~~--------------~~v~~l~gH~~~V~~l~~spdg~-~l~S~s~D~tvriWdv~~~ 396 (420)
T 4gga_A 352 PTM--------------AKVAELKGHTSRVLSLTMSPDGA-TVASAAADETLRLWRCFEL 396 (420)
T ss_dssp TTC--------------CEEEEECCCSSCEEEEEECTTSS-CEEEEETTTEEEEECCSCS
T ss_pred CCC--------------cEEEEEcCCCCCEEEEEEcCCCC-EEEEEecCCeEEEEECCCC
Confidence 875 56788899999999999999999 6999999999999999765
No 57
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=100.00 E-value=4e-33 Score=251.86 Aligned_cols=253 Identities=20% Similarity=0.273 Sum_probs=209.2
Q ss_pred EEeccCCceeEEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCCeeeEEecCCCCceEEEEeC
Q 014472 120 QQINHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSD 199 (424)
Q Consensus 120 ~~~~h~~~v~~i~~~p~~~~~latg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~ 199 (424)
....|.+.|.+++|+|++. +|++|+.||.|++|++... ........+.+|...|.+++|. +. +|++++.
T Consensus 54 ~~~~~~~~v~~~~~~~~~~-~l~~~~~dg~i~~~~~~~~-------~~~~~~~~~~~~~~~i~~~~~~--~~-~l~~~~~ 122 (313)
T 3odt_A 54 VVYTGQGFLNSVCYDSEKE-LLLFGGKDTMINGVPLFAT-------SGEDPLYTLIGHQGNVCSLSFQ--DG-VVISGSW 122 (313)
T ss_dssp EEEECSSCEEEEEEETTTT-EEEEEETTSCEEEEETTCC-------TTSCC-CEECCCSSCEEEEEEE--TT-EEEEEET
T ss_pred EeecCCccEEEEEECCCCC-EEEEecCCCeEEEEEeeec-------CCCCcccchhhcccCEEEEEec--CC-EEEEEeC
Confidence 3457899999999999886 8999999999999999862 1234566788999999999993 44 7999999
Q ss_pred CCcEEEEeCCCCCCCCcccceeeeecCCcceeeEEeeCCCCcEEEEEeCCCeEEEEECCCCCCCCCeeEecc-cCCCeeE
Q 014472 200 DAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVA-HQSEVNC 278 (424)
Q Consensus 200 dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~~s~~~dg~i~i~d~~~~~~~~~~~~~~~-~~~~v~~ 278 (424)
||.|++||. . .....+..|...+.+++|+|.....+++++.||.|++||... ....+.. |...+.+
T Consensus 123 d~~i~~~d~--~------~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~i~d~~~-----~~~~~~~~~~~~i~~ 189 (313)
T 3odt_A 123 DKTAKVWKE--G------SLVYNLQAHNASVWDAKVVSFSENKFLTASADKTIKLWQNDK-----VIKTFSGIHNDVVRH 189 (313)
T ss_dssp TSEEEEEET--T------EEEEEEECCSSCEEEEEEEETTTTEEEEEETTSCEEEEETTE-----EEEEECSSCSSCEEE
T ss_pred CCCEEEEcC--C------cEEEecccCCCceeEEEEccCCCCEEEEEECCCCEEEEecCc-----eEEEEeccCcccEEE
Confidence 999999992 1 345667789999999999994445778999999999999432 3455555 8899999
Q ss_pred EEecCCCCeEEEEEeCCCcEEEEECCCCCCcceeecCCCCCEEEEEEcCCCCcEEEEEeCCCeEEEeeCCCCCcccCCCc
Q 014472 279 LAFNPFNEWILATGSTDKTVKLFDLRKISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPED 358 (424)
Q Consensus 279 i~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~ 358 (424)
++|+|++. +++++.||.|++||+++ +.++..+..|...|++++|+|++ . |++++.||.|++||+.++
T Consensus 190 ~~~~~~~~--~~~~~~dg~i~i~d~~~-~~~~~~~~~~~~~i~~~~~~~~~-~-l~~~~~dg~v~iwd~~~~-------- 256 (313)
T 3odt_A 190 LAVVDDGH--FISCSNDGLIKLVDMHT-GDVLRTYEGHESFVYCIKLLPNG-D-IVSCGEDRTVRIWSKENG-------- 256 (313)
T ss_dssp EEEEETTE--EEEEETTSEEEEEETTT-CCEEEEEECCSSCEEEEEECTTS-C-EEEEETTSEEEEECTTTC--------
T ss_pred EEEcCCCe--EEEccCCCeEEEEECCc-hhhhhhhhcCCceEEEEEEecCC-C-EEEEecCCEEEEEECCCC--------
Confidence 99999875 88999999999999998 78889999999999999999998 3 889999999999999875
Q ss_pred cCCCCCeeeEEEcCCCCCcceEEeCCCCCcEEEEEeCCCcEEEEecCCCCCCCCCCCCC
Q 014472 359 AEDGPPELLFIHGGHTSKISDFSWNPCEDWVISSVAEDNILQIWQMAENIYHDEDDLPG 417 (424)
Q Consensus 359 ~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~ 417 (424)
+++..+..|...|.+++|+|+++ +++++.||.|++|++.++.+..+.+.+.
T Consensus 257 ------~~~~~~~~~~~~i~~~~~~~~~~--~~~~~~dg~i~iw~~~~~~~~~~~~~~~ 307 (313)
T 3odt_A 257 ------SLKQVITLPAISIWSVDCMSNGD--IIVGSSDNLVRIFSQEKSRWASEDEIKG 307 (313)
T ss_dssp ------CEEEEEECSSSCEEEEEECTTSC--EEEEETTSCEEEEESCGGGCCC------
T ss_pred ------ceeEEEeccCceEEEEEEccCCC--EEEEeCCCcEEEEeCCCCceeehhhhhh
Confidence 55667788888999999999998 4568899999999999987766655443
No 58
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=100.00 E-value=1.3e-34 Score=267.49 Aligned_cols=262 Identities=15% Similarity=0.254 Sum_probs=210.6
Q ss_pred eccCCceeEEEecCC---CCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEec-----CCCCeeeEEecCCCC--
Q 014472 122 INHDGEVNRARYMPQ---NPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRG-----HSTEGYGLSWSKFKE-- 191 (424)
Q Consensus 122 ~~h~~~v~~i~~~p~---~~~~latg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~-----h~~~v~~l~~~~~~~-- 191 (424)
.+|.+.|++++|+|+ +..++++++.++.|++|++.. ......+.. |...|++++|+|++.
T Consensus 15 ~~h~~~v~~i~~~p~~~~~~~~~~~~~~~~~v~vw~~~~----------~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 84 (366)
T 3k26_A 15 EDHNQPLFGVQFNWHSKEGDPLVFATVGSNRVTLYECHS----------QGEIRLLQSYVDADADENFYTCAWTYDSNTS 84 (366)
T ss_dssp CTTCSCEEEEEECTTCCTTSCEEEEEEETTEEEEEEECG----------GGCEEEEEEEECSCTTCCEEEEEEEECTTTC
T ss_pred cCCCCceEEEEEecccCCCCceEEEECCCCEEEEEEcCC----------CcEEEeeeeccccCCCCcEEEEEeccCCCCC
Confidence 369999999999984 444566667778999999986 233333432 667899999999842
Q ss_pred -ceEEEEeCCCcEEEEeCCCCCCCCcccceeeeecCCcceeeEEeeCCCCcEEEEEeCCCeEEEEECCCCCCCCCeeEe-
Q 014472 192 -GHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSV- 269 (424)
Q Consensus 192 -~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~~s~~~dg~i~i~d~~~~~~~~~~~~~- 269 (424)
.+|++|+.||.|++||+.++ ..+..+.+|...|.+++|+|.+..+|++++.||.|++||+++++. +..+
T Consensus 85 ~~~l~~~~~dg~i~v~d~~~~------~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~---~~~~~ 155 (366)
T 3k26_A 85 HPLLAVAGSRGIIRIINPITM------QCIKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDTL---VAIFG 155 (366)
T ss_dssp CEEEEEEETTCEEEEECTTTC------CEEEEEESCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTTTEE---EEEEC
T ss_pred CCEEEEecCCCEEEEEEchhc------eEeeeecCCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeecCeE---EEEec
Confidence 37999999999999999876 345667789999999999994445778999999999999998654 5555
Q ss_pred --cccCCCeeEEEecCCCCeEEEEEeCCCcEEEEECCCCCCcceee----------------------------cCCCCC
Q 014472 270 --VAHQSEVNCLAFNPFNEWILATGSTDKTVKLFDLRKISTALHTF----------------------------DSHKEE 319 (424)
Q Consensus 270 --~~~~~~v~~i~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~----------------------------~~~~~~ 319 (424)
..|...|.+++|+|++. +|++++.||.|++||+++ ...+..+ ..|...
T Consensus 156 ~~~~~~~~v~~~~~~~~~~-~l~~~~~dg~i~i~d~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (366)
T 3k26_A 156 GVEGHRDEVLSADYDLLGE-KIMSCGMDHSLKLWRINS-KRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNY 233 (366)
T ss_dssp STTSCSSCEEEEEECTTSS-EEEEEETTSCEEEEESCS-HHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCSSC
T ss_pred ccccccCceeEEEECCCCC-EEEEecCCCCEEEEECCC-CccccccceeEEecCCCCcccccceeeccCccccccCCcce
Confidence 67999999999999887 699999999999999987 3333322 338999
Q ss_pred EEEEEEcCCCCcEEEEEeCCCeEEEeeCCCCCcccCCCccCCCCCeeeEEEcCCCCCcceEEeCCC--CCcEEEEEeCCC
Q 014472 320 VFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPEDAEDGPPELLFIHGGHTSKISDFSWNPC--EDWVISSVAEDN 397 (424)
Q Consensus 320 v~~~~~sp~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~--~~~~l~s~~~d~ 397 (424)
|.+++|+ + .+|++++.|+.|++||+...................+..+.+|...|++++|+|+ ++ +|++++.||
T Consensus 234 v~~~~~~--~-~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~-~l~~~~~dg 309 (366)
T 3k26_A 234 VDCVRWL--G-DLILSKSCENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMDFWQK-MLALGNQVG 309 (366)
T ss_dssp CCEEEEE--T-TEEEEECSSSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSSCCSSCCCCEECTTSS-EEEEECTTS
T ss_pred EEEEEEc--C-CEEEEEecCCEEEEEeCCCccccccccccCCcchheeccccccCCcEEEEEEcCCCCCc-EEEEEecCC
Confidence 9999999 4 3799999999999999987654333222223334667888899999999999999 88 799999999
Q ss_pred cEEEEecCCCC
Q 014472 398 ILQIWQMAENI 408 (424)
Q Consensus 398 ~i~iw~~~~~~ 408 (424)
.|++|++.++.
T Consensus 310 ~i~vwd~~~~~ 320 (366)
T 3k26_A 310 KLYVWDLEVED 320 (366)
T ss_dssp CEEEEECCSSS
T ss_pred cEEEEECCCCC
Confidence 99999998864
No 59
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=100.00 E-value=3.5e-35 Score=272.92 Aligned_cols=264 Identities=14% Similarity=0.177 Sum_probs=193.0
Q ss_pred ccCCceeEEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCCeeeEEecCCCCceEEEEeCCCc
Q 014472 123 NHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDDAQ 202 (424)
Q Consensus 123 ~h~~~v~~i~~~p~~~~~latg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~ 202 (424)
.|.+.|++++|+|++. +||+|+.||.|++||+.... ...+...+.+|...|.+++|+|++. +|++|+.|+.
T Consensus 53 ~h~~~v~~~~~s~~~~-~l~s~s~d~~v~vwd~~~~~-------~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~ 123 (377)
T 3dwl_C 53 DHDKIVTCVDWAPKSN-RIVTCSQDRNAYVYEKRPDG-------TWKQTLVLLRLNRAATFVRWSPNED-KFAVGSGARV 123 (377)
T ss_dssp CCSSCEEEEEECTTTC-CEEEEETTSSEEEC-------------CCCCEEECCCCSSCEEEEECCTTSS-CCEEEESSSC
T ss_pred cCCceEEEEEEeCCCC-EEEEEeCCCeEEEEEcCCCC-------ceeeeeEecccCCceEEEEECCCCC-EEEEEecCCe
Confidence 6899999999999986 89999999999999998721 1345677888999999999999887 7999999999
Q ss_pred EEEEeCCCCCCCCcccceeeeec-CCcceeeEEeeCCCCcEEEEEeCCCeEEEEECCCCCC---------------CCCe
Q 014472 203 ICLWDINAAPKNKSLEAMQIFKV-HEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSV---------------SKPV 266 (424)
Q Consensus 203 i~vwd~~~~~~~~~~~~~~~~~~-~~~~v~~i~~~~~~~~~~~s~~~dg~i~i~d~~~~~~---------------~~~~ 266 (424)
|++||++.+.. ......+.. |...|.+++|+|++. +|++++.|+.|++||++.... ...+
T Consensus 124 i~iwd~~~~~~---~~~~~~~~~~h~~~v~~~~~~~~~~-~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (377)
T 3dwl_C 124 ISVCYFEQEND---WWVSKHLKRPLRSTILSLDWHPNNV-LLAAGCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVC 199 (377)
T ss_dssp EEECCC--------CCCCEEECSSCCSCEEEEEECTTSS-EEEEEESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEE
T ss_pred EEEEEECCccc---ceeeeEeecccCCCeEEEEEcCCCC-EEEEEeCCCEEEEEEEEecccCCCccccccccccchhhhh
Confidence 99999987642 123445556 999999999999986 667999999999999964321 1123
Q ss_pred eEecccCCCeeEEEecCCCCeEEEEEeCCCcEEEEECCCCCCc----ceeecCCCCCEEEEEEcCCCCcEEEEEeCCCeE
Q 014472 267 QSVVAHQSEVNCLAFNPFNEWILATGSTDKTVKLFDLRKISTA----LHTFDSHKEEVFQVGWNPKNETILASCCLGRRL 342 (424)
Q Consensus 267 ~~~~~~~~~v~~i~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~----~~~~~~~~~~v~~~~~sp~~~~~l~s~~~dg~i 342 (424)
..+ .|...|++++|+|++. +|++|+.||.|++||+++ +.. +..+..|...|.+++|+|++. +|++++.++.+
T Consensus 200 ~~~-~~~~~v~~~~~sp~~~-~l~~~~~d~~i~iwd~~~-~~~~~~~~~~~~~~~~~v~~~~~s~~~~-~l~~~~~~~~~ 275 (377)
T 3dwl_C 200 AEY-PSGGWVHAVGFSPSGN-ALAYAGHDSSVTIAYPSA-PEQPPRALITVKLSQLPLRSLLWANESA-IVAAGYNYSPI 275 (377)
T ss_dssp ECC-CCSSSEEEEEECTTSS-CEEEEETTTEEC-CEECS-TTSCEEECCCEECSSSCEEEEEEEETTE-EEEEESSSSEE
T ss_pred hcc-cCCceEEEEEECCCCC-EEEEEeCCCcEEEEECCC-CCCcceeeEeecCCCCceEEEEEcCCCC-EEEEEcCCcEE
Confidence 334 7899999999999998 699999999999999998 444 778889999999999999995 78888766655
Q ss_pred EEeeCCCCCccc--CCCccCCCC--------------C---------eeeE-------------EEcCCCCCcceEEeCC
Q 014472 343 MVWDLSRIDEEQ--TPEDAEDGP--------------P---------ELLF-------------IHGGHTSKISDFSWNP 384 (424)
Q Consensus 343 ~iwd~~~~~~~~--~~~~~~~~~--------------~---------~~~~-------------~~~~h~~~v~~~~~~~ 384 (424)
+|+........ ......... . .... ....|...|+++++.+
T Consensus 276 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~H~~~i~~~~~~~ 354 (377)
T 3dwl_C 276 -LLQGNESGWAHTRDLDAGTSKTSFTHTGNTGEGREEEGPVSFTALRSTFRNMDLKGSSQSISSLPTVHQNMIATLRPYA 354 (377)
T ss_dssp -EECCCC---CCSBCCCSCCCCCCBSSSSSBCCCCCC-------------------------CCCSSSCSSCEEEEEEEE
T ss_pred -EEEeCCCceEEEeeecccccccccccccccccccccccccccccccccccchhhccccccccccCccccceeEEEeccC
Confidence 77665322110 000000000 0 0001 1124899999999876
Q ss_pred CCCc---EEEEEeCCCcEEEEec
Q 014472 385 CEDW---VISSVAEDNILQIWQM 404 (424)
Q Consensus 385 ~~~~---~l~s~~~d~~i~iw~~ 404 (424)
.... .|+|+|.||.|+||++
T Consensus 355 ~~~~~~~~~~s~g~Dg~i~iWdl 377 (377)
T 3dwl_C 355 GTPGNITAFTSSGTDGRVVLWTL 377 (377)
T ss_dssp EETTEEEEEEEEETTSEEEEECC
T ss_pred CCCCceEEEEeecCCCcEEEecC
Confidence 5543 5999999999999986
No 60
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=100.00 E-value=1.5e-34 Score=267.96 Aligned_cols=251 Identities=13% Similarity=0.153 Sum_probs=211.2
Q ss_pred ccCCceeEEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCCeeeEEecCCCCceEEEEeCCCc
Q 014472 123 NHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDDAQ 202 (424)
Q Consensus 123 ~h~~~v~~i~~~p~~~~~latg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~ 202 (424)
.|.++|++++|+|++. +||+|+.+|.|++|++.. ........+.+|...|.+++|+|++. +|++++.||.
T Consensus 6 ~~~~~i~~~~~s~~~~-~l~~~~~d~~v~i~~~~~--------~~~~~~~~~~~h~~~v~~~~~~~~~~-~l~~~~~dg~ 75 (372)
T 1k8k_C 6 FLVEPISCHAWNKDRT-QIAICPNNHEVHIYEKSG--------NKWVQVHELKEHNGQVTGVDWAPDSN-RIVTCGTDRN 75 (372)
T ss_dssp SCSSCCCEEEECTTSS-EEEEECSSSEEEEEEEET--------TEEEEEEEEECCSSCEEEEEEETTTT-EEEEEETTSC
T ss_pred ccCCCeEEEEECCCCC-EEEEEeCCCEEEEEeCCC--------CcEEeeeeecCCCCcccEEEEeCCCC-EEEEEcCCCe
Confidence 3899999999999886 899999999999999987 22226778889999999999999887 7999999999
Q ss_pred EEEEeCCCCCCCCcccceeeeecCCcceeeEEeeCCCCcEEEEEeCCCeEEEEECCCCCCCCCeeEe-cccCCCeeEEEe
Q 014472 203 ICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSV-VAHQSEVNCLAF 281 (424)
Q Consensus 203 i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~~s~~~dg~i~i~d~~~~~~~~~~~~~-~~~~~~v~~i~~ 281 (424)
|++||+.++.. .....+..|...|.+++|+|++. +|++++.||.|++||++..........+ ..|...|.+++|
T Consensus 76 i~vwd~~~~~~----~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~ 150 (372)
T 1k8k_C 76 AYVWTLKGRTW----KPTLVILRINRAARCVRWAPNEK-KFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDW 150 (372)
T ss_dssp EEEEEEETTEE----EEEEECCCCSSCEEEEEECTTSS-EEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEE
T ss_pred EEEEECCCCee----eeeEEeecCCCceeEEEECCCCC-EEEEEeCCCEEEEEEecCCCcceeeeeeecccCCCeeEEEE
Confidence 99999976521 22333456889999999999986 5679999999999999886531112222 568899999999
Q ss_pred cCCCCeEEEEEeCCCcEEEEECCC-----------------CCCcceeecCCCCCEEEEEEcCCCCcEEEEEeCCCeEEE
Q 014472 282 NPFNEWILATGSTDKTVKLFDLRK-----------------ISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMV 344 (424)
Q Consensus 282 ~~~~~~~l~~g~~dg~i~iwd~~~-----------------~~~~~~~~~~~~~~v~~~~~sp~~~~~l~s~~~dg~i~i 344 (424)
+|++. +|++|+.||.|++||++. .+.++..+..|...|.+++|+|++. +|++++.||.|++
T Consensus 151 ~~~~~-~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~i~i 228 (372)
T 1k8k_C 151 HPNSV-LLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGS-RVAWVSHDSTVCL 228 (372)
T ss_dssp CTTSS-EEEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSS-EEEEEETTTEEEE
T ss_pred cCCCC-EEEEEcCCCCEEEEEcccccccccccccccccccchhhheEecCCCCCeEEEEEECCCCC-EEEEEeCCCEEEE
Confidence 99887 699999999999999741 2567788889999999999999996 7999999999999
Q ss_pred eeCCCCCcccCCCccCCCCCeeeEEEcCCCCCcceEEeCCCCCcEEEEEeCCCcEEEEecCC
Q 014472 345 WDLSRIDEEQTPEDAEDGPPELLFIHGGHTSKISDFSWNPCEDWVISSVAEDNILQIWQMAE 406 (424)
Q Consensus 345 wd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iw~~~~ 406 (424)
||++.+ +.+..+.+|...|.+++|+|++. +|+++ .|+.|++|++..
T Consensus 229 ~d~~~~--------------~~~~~~~~~~~~v~~~~~~~~~~-~l~~~-~d~~i~i~~~~~ 274 (372)
T 1k8k_C 229 ADADKK--------------MAVATLASETLPLLAVTFITESS-LVAAG-HDCFPVLFTYDS 274 (372)
T ss_dssp EEGGGT--------------TEEEEEECSSCCEEEEEEEETTE-EEEEE-TTSSCEEEEEET
T ss_pred EECCCC--------------ceeEEEccCCCCeEEEEEecCCC-EEEEE-eCCeEEEEEccC
Confidence 999875 45667788998999999999998 67776 899999999988
No 61
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=100.00 E-value=2.7e-34 Score=268.74 Aligned_cols=258 Identities=13% Similarity=0.159 Sum_probs=210.5
Q ss_pred ccCCceeEEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCCeeeEEecCC----C---CceEE
Q 014472 123 NHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKF----K---EGHLL 195 (424)
Q Consensus 123 ~h~~~v~~i~~~p~~~~~latg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~----~---~~~l~ 195 (424)
+|.+.|++++|+| .+||+|+.||.|+||++....... .......+.+|...|.+++|+|+ + . +|+
T Consensus 14 ~h~~~i~~~~~~~---~~l~s~~~dg~i~iw~~~~~~~~~----~~~~~~~~~~h~~~v~~~~~~~~~~~~g~~~~-~l~ 85 (397)
T 1sq9_A 14 AHDADIFSVSACN---SFTVSCSGDGYLKVWDNKLLDNEN----PKDKSYSHFVHKSGLHHVDVLQAIERDAFELC-LVA 85 (397)
T ss_dssp CSSSCEEEEEECS---SEEEEEETTSEEEEEESBCCTTCC----GGGGEEEEECCTTCEEEEEEEEEEETTTEEEE-EEE
T ss_pred hhhcCeEEEEecC---CeEEEEcCCCEEEEEECCCccccc----CCCcceEEecCCCcEEEEEEecccccCCcccc-EEE
Confidence 6999999999998 389999999999999998722110 12357788899999999999998 6 6 799
Q ss_pred EEeCCCcEEEEeCCCCCCCCcccceeeeecC-----CcceeeEEee----CCCCcEEEEEeCCCeEEEEECCC------C
Q 014472 196 SGSDDAQICLWDINAAPKNKSLEAMQIFKVH-----EGVVEDVAWH----LRHEYLFGSVGDDQYLLIWDLRT------P 260 (424)
Q Consensus 196 s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~-----~~~v~~i~~~----~~~~~~~~s~~~dg~i~i~d~~~------~ 260 (424)
+++.||.|++||+.++..... .....+..| ...|.+++|+ |++..+|++++.||.|++||++. .
T Consensus 86 s~~~dg~i~iw~~~~~~~~~~-~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~ 164 (397)
T 1sq9_A 86 TTSFSGDLLFYRITREDETKK-VIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNS 164 (397)
T ss_dssp EEETTSCEEEEEEEECTTTCC-EEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEESSSSHHHH
T ss_pred EEcCCCCEEEEEccCCccccc-ccceeecccccccCCCcEEEEEEeeccCCCCceEEEEEeCCCcEEEEeCCcccccccc
Confidence 999999999999987643111 114556667 5899999999 98875367999999999999988 5
Q ss_pred CCCC--CeeEe-------cccCCCeeEEEecCCCCeEEEEEeCCCcEEEEECCCCCCcceeecC---C---CCCEEEEEE
Q 014472 261 SVSK--PVQSV-------VAHQSEVNCLAFNPFNEWILATGSTDKTVKLFDLRKISTALHTFDS---H---KEEVFQVGW 325 (424)
Q Consensus 261 ~~~~--~~~~~-------~~~~~~v~~i~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~---~---~~~v~~~~~ 325 (424)
.... +...+ ..|...|.+++|+|++ +|++|+.||.|++||+++ ..++..+.. | ...|.+++|
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--~l~~~~~dg~i~i~d~~~-~~~~~~~~~~~~h~~~~~~i~~i~~ 241 (397)
T 1sq9_A 165 LTLNWSPTLELQGTVESPMTPSQFATSVDISERG--LIATGFNNGTVQISELST-LRPLYNFESQHSMINNSNSIRSVKF 241 (397)
T ss_dssp TTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS--EEEEECTTSEEEEEETTT-TEEEEEEECCC---CCCCCEEEEEE
T ss_pred ceeeccCcceeeeeeccccCCCCCceEEEECCCc--eEEEEeCCCcEEEEECCC-CceeEEEeccccccccCCccceEEE
Confidence 5322 11144 4488999999999988 699999999999999998 678888888 8 999999999
Q ss_pred cCCCCcEEEEEeCC---CeEEEeeCCCCCcccCCCccCCCCCeeeEEEcC-------------CCCCcceEEeCCCCCcE
Q 014472 326 NPKNETILASCCLG---RRLMVWDLSRIDEEQTPEDAEDGPPELLFIHGG-------------HTSKISDFSWNPCEDWV 389 (424)
Q Consensus 326 sp~~~~~l~s~~~d---g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~-------------h~~~v~~~~~~~~~~~~ 389 (424)
+|++. +|++++.| |.|++||++.. +.+..+.+ |...|.+++|+|+++ +
T Consensus 242 ~~~~~-~l~~~~~d~~~g~i~i~d~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~ 305 (397)
T 1sq9_A 242 SPQGS-LLAIAHDSNSFGCITLYETEFG--------------ERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGE-T 305 (397)
T ss_dssp CSSTT-EEEEEEEETTEEEEEEEETTTC--------------CEEEEECBC--------CCBSBSSCEEEEEECSSSS-E
T ss_pred CCCCC-EEEEEecCCCCceEEEEECCCC--------------cccceeccCcccccccccccccCCcEEEEEECCCCC-E
Confidence 99986 78999999 99999999875 44556666 899999999999999 6
Q ss_pred EEEEeCCCcEEEEecCCCC
Q 014472 390 ISSVAEDNILQIWQMAENI 408 (424)
Q Consensus 390 l~s~~~d~~i~iw~~~~~~ 408 (424)
|++++.||.|+||++.++.
T Consensus 306 l~~~~~dg~i~iwd~~~~~ 324 (397)
T 1sq9_A 306 LCSAGWDGKLRFWDVKTKE 324 (397)
T ss_dssp EEEEETTSEEEEEETTTTE
T ss_pred EEEEeCCCeEEEEEcCCCc
Confidence 9999999999999998763
No 62
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=100.00 E-value=8.6e-34 Score=261.14 Aligned_cols=266 Identities=15% Similarity=0.221 Sum_probs=208.3
Q ss_pred cEEEEEEeccCCceeEEEecCCCCcEEEEEec---CCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCCeeeEEecCCC-
Q 014472 115 KVQIIQQINHDGEVNRARYMPQNPFLIATKTV---SAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFK- 190 (424)
Q Consensus 115 ~~~~~~~~~h~~~v~~i~~~p~~~~~latg~~---dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~- 190 (424)
.+......+|.+.|++++|+|++..++++|+. ||.|+||++.. .... .....+|...|.+++|+|++
T Consensus 8 ~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~s~~~~d~~v~iw~~~~--------~~~~-~~~~~~~~~~v~~~~~~~~~~ 78 (357)
T 3i2n_A 8 QIIAHIQKGFNYTVFDCKWVPCSAKFVTMGNFARGTGVIQLYEIQH--------GDLK-LLREIEKAKPIKCGTFGATSL 78 (357)
T ss_dssp CEEEEEEEECSSCEEEEEECTTSSEEEEEEC--CCCEEEEEEEECS--------SSEE-EEEEEEESSCEEEEECTTCCT
T ss_pred HHhhhhccCCCCceEEEEEcCCCceEEEecCccCCCcEEEEEeCCC--------Cccc-ceeeecccCcEEEEEEcCCCC
Confidence 34444445799999999999999878888887 99999999987 1111 12234799999999999984
Q ss_pred -CceEEEEeCCCcEEEEeCCCCCCCCcccceeeeecCCcceeeEEe------eCCCCcEEEEEeCCCeEEEEECCCCCCC
Q 014472 191 -EGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAW------HLRHEYLFGSVGDDQYLLIWDLRTPSVS 263 (424)
Q Consensus 191 -~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~i~~------~~~~~~~~~s~~~dg~i~i~d~~~~~~~ 263 (424)
..+|++|+.||.|++||+.++. ..+..+.+|...|.++.| +|++. +|++++.||.|++||++++..
T Consensus 79 ~~~~l~~~~~dg~i~iwd~~~~~-----~~~~~~~~~~~~v~~~~~~~~~~~s~~~~-~l~~~~~d~~i~vwd~~~~~~- 151 (357)
T 3i2n_A 79 QQRYLATGDFGGNLHIWNLEAPE-----MPVYSVKGHKEIINAIDGIGGLGIGEGAP-EIVTGSRDGTVKVWDPRQKDD- 151 (357)
T ss_dssp TTCCEEEEETTSCEEEECTTSCS-----SCSEEECCCSSCEEEEEEESGGGCC-CCC-EEEEEETTSCEEEECTTSCSS-
T ss_pred CCceEEEecCCCeEEEEeCCCCC-----ccEEEEEecccceEEEeeccccccCCCcc-EEEEEeCCCeEEEEeCCCCCC-
Confidence 3479999999999999998764 135567789999999965 56775 567999999999999998652
Q ss_pred CCeeEecccCC----CeeEEE----ecCCCCeEEEEEeCCCcEEEEECCCCCCcceeecCCCCCEEEEEEcC---CCCcE
Q 014472 264 KPVQSVVAHQS----EVNCLA----FNPFNEWILATGSTDKTVKLFDLRKISTALHTFDSHKEEVFQVGWNP---KNETI 332 (424)
Q Consensus 264 ~~~~~~~~~~~----~v~~i~----~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~sp---~~~~~ 332 (424)
++..+..|.. .+.+++ |+|++. +|++|+.||.|++||+++ ... .....|...|.+++|+| ++. +
T Consensus 152 -~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~-~l~~~~~d~~i~i~d~~~-~~~-~~~~~~~~~v~~~~~~~~~~~~~-~ 226 (357)
T 3i2n_A 152 -PVANMEPVQGENKRDCWTVAFGNAYNQEER-VVCAGYDNGDIKLFDLRN-MAL-RWETNIKNGVCSLEFDRKDISMN-K 226 (357)
T ss_dssp -CSEEECCCTTSCCCCEEEEEEECCCC-CCC-EEEEEETTSEEEEEETTT-TEE-EEEEECSSCEEEEEESCSSSSCC-E
T ss_pred -cceeccccCCCCCCceEEEEEEeccCCCCC-EEEEEccCCeEEEEECcc-Cce-eeecCCCCceEEEEcCCCCCCCC-E
Confidence 3555554444 899998 788887 699999999999999997 444 44466889999999999 775 7
Q ss_pred EEEEeCCCeEEEeeCCCCCcccCCCccCCCCCeeeEEEcCCCCCcceEEeCCCCCcEEEEEeCCCcEEEEecCCCCCC
Q 014472 333 LASCCLGRRLMVWDLSRIDEEQTPEDAEDGPPELLFIHGGHTSKISDFSWNPCEDWVISSVAEDNILQIWQMAENIYH 410 (424)
Q Consensus 333 l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~~ 410 (424)
|++++.||.|++||++....... .......+|...|++++|+|+++.+|++++.||.|++|++..+...
T Consensus 227 l~~~~~dg~i~i~d~~~~~~~~~---------~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~ 295 (357)
T 3i2n_A 227 LVATSLEGKFHVFDMRTQHPTKG---------FASVSEKAHKSTVWQVRHLPQNRELFLTAGGAGGLHLWKYEYPIQR 295 (357)
T ss_dssp EEEEESTTEEEEEEEEEEETTTE---------EEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEEEECCSCC
T ss_pred EEEECCCCeEEEEeCcCCCcccc---------eeeeccCCCcCCEEEEEECCCCCcEEEEEeCCCcEEEeecCCCccc
Confidence 99999999999999987532111 1122445899999999999999867999999999999999876543
No 63
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.9e-33 Score=264.82 Aligned_cols=257 Identities=15% Similarity=0.188 Sum_probs=210.9
Q ss_pred EeccCCceeEEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCC---------------eeeEE
Q 014472 121 QINHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTE---------------GYGLS 185 (424)
Q Consensus 121 ~~~h~~~v~~i~~~p~~~~~latg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~h~~~---------------v~~l~ 185 (424)
...|...|.+++|+|++. +|++++.||.|++||+.. ......+..+... +.+++
T Consensus 145 ~~~~~~~v~~~~~~~~~~-~l~~~~~d~~i~iwd~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 213 (425)
T 1r5m_A 145 LNFHRAPIVSVKWNKDGT-HIISMDVENVTILWNVIS----------GTVMQHFELKETGGSSINAENHSGDGSLGVDVE 213 (425)
T ss_dssp ECCCCSCEEEEEECTTSS-EEEEEETTCCEEEEETTT----------TEEEEEECCC---------------CCCBSCCE
T ss_pred ccCCCccEEEEEECCCCC-EEEEEecCCeEEEEECCC----------CcEEEEeeccccCccceeeccccCCcceeeEEE
Confidence 346999999999999887 788999999999999976 3445556656555 99999
Q ss_pred ecCCCCceEEEEeCCCcEEEEeCCCCCCCCcccceeeeecCCcceeeEEeeCCCCcEEEEEeCCCeEEEEECCCCCCCCC
Q 014472 186 WSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKP 265 (424)
Q Consensus 186 ~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~~s~~~dg~i~i~d~~~~~~~~~ 265 (424)
|++++ .+++++.+|.|++||+..+. .+..+..|...|.+++|+|++. +|++++.||.|++||+++...
T Consensus 214 ~~~~~--~~~~~~~~g~i~~~d~~~~~------~~~~~~~~~~~i~~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~--- 281 (425)
T 1r5m_A 214 WVDDD--KFVIPGPKGAIFVYQITEKT------PTGKLIGHHGPISVLEFNDTNK-LLLSASDDGTLRIWHGGNGNS--- 281 (425)
T ss_dssp EEETT--EEEEECGGGCEEEEETTCSS------CSEEECCCSSCEEEEEEETTTT-EEEEEETTSCEEEECSSSBSC---
T ss_pred EcCCC--EEEEEcCCCeEEEEEcCCCc------eeeeeccCCCceEEEEECCCCC-EEEEEcCCCEEEEEECCCCcc---
Confidence 99864 59999999999999998763 3455667999999999999987 567999999999999998654
Q ss_pred eeEecccCCCeeEEEecCCCCeEEEEEeCCCcEEEEECCCCCCcceeecCCCCCEEEEEEcCCCCcEEEEEeCCCeEEEe
Q 014472 266 VQSVVAHQSEVNCLAFNPFNEWILATGSTDKTVKLFDLRKISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVW 345 (424)
Q Consensus 266 ~~~~~~~~~~v~~i~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~s~~~dg~i~iw 345 (424)
+..+..|...|.+++|+|++ +|++++.||.|++||+++ ..++..+..|...|.+++|+|++. +|++++.||.|++|
T Consensus 282 ~~~~~~~~~~i~~~~~~~~~--~l~~~~~d~~i~i~d~~~-~~~~~~~~~~~~~i~~~~~s~~~~-~l~~~~~dg~i~i~ 357 (425)
T 1r5m_A 282 QNCFYGHSQSIVSASWVGDD--KVISCSMDGSVRLWSLKQ-NTLLALSIVDGVPIFAGRISQDGQ-KYAVAFMDGQVNVY 357 (425)
T ss_dssp SEEECCCSSCEEEEEEETTT--EEEEEETTSEEEEEETTT-TEEEEEEECTTCCEEEEEECTTSS-EEEEEETTSCEEEE
T ss_pred ceEecCCCccEEEEEECCCC--EEEEEeCCCcEEEEECCC-CcEeEecccCCccEEEEEEcCCCC-EEEEEECCCeEEEE
Confidence 66777899999999999988 689999999999999998 678888889999999999999996 79999999999999
Q ss_pred eCCCCCcccCCCc-c-----CCCCCeeeEEEcCCCC--CcceEEeCCCCCcEEEEEeCCCcEEEEecC
Q 014472 346 DLSRIDEEQTPED-A-----EDGPPELLFIHGGHTS--KISDFSWNPCEDWVISSVAEDNILQIWQMA 405 (424)
Q Consensus 346 d~~~~~~~~~~~~-~-----~~~~~~~~~~~~~h~~--~v~~~~~~~~~~~~l~s~~~d~~i~iw~~~ 405 (424)
|+........... . ...+..++..+.+|.. .|++++|+|+++ +|++++.||.|++|++.
T Consensus 358 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~-~l~~~~~dg~i~iw~~~ 424 (425)
T 1r5m_A 358 DLKKLNSKSRSLYGNRDGILNPLPIPLYASYQSSQDNDYIFDLSWNCAGN-KISVAYSLQEGSVVAIP 424 (425)
T ss_dssp ECHHHHC--------------CEECCEEEEECCTTCCCCEEEEEECTTSS-EEEEEESSSCCEEEECC
T ss_pred ECCCCccceeeeecccccccCcccchhhhhhcCcccCCceEEEEccCCCc-eEEEEecCceEEEEeec
Confidence 9986531110000 0 0011236788888976 999999999999 68899999999999986
No 64
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=100.00 E-value=9e-35 Score=276.33 Aligned_cols=266 Identities=17% Similarity=0.280 Sum_probs=201.6
Q ss_pred eccCCceeEEEecCCCCcEEEEEecCCeEEEEeCCCCCCCC-CCCCCCCCcEEEecCC------------CCeeeEEecC
Q 014472 122 INHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKP-PLDGACSPDLRLRGHS------------TEGYGLSWSK 188 (424)
Q Consensus 122 ~~h~~~v~~i~~~p~~~~~latg~~dg~v~iwd~~~~~~~~-~~~~~~~~~~~~~~h~------------~~v~~l~~~~ 188 (424)
+.|.+.|++++|+|++. +||+|+.||.|+||++....... ...........+.+|. ..|.+++|+|
T Consensus 25 ~~~~~~V~~v~~s~~g~-~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~ 103 (447)
T 3dw8_B 25 VAEADIISTVEFNHSGE-LLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLP 103 (447)
T ss_dssp CCGGGSEEEEEECSSSS-EEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEECC
T ss_pred ccccCcEEEEEECCCCC-EEEEEcCCCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEEEcC
Confidence 45788999999999886 89999999999999998632100 0011223466788998 8899999999
Q ss_pred CCC-ceEEEEeCCCcEEEEeCCCCCCC-------------------Ccc--------------cceee-eecCCcceeeE
Q 014472 189 FKE-GHLLSGSDDAQICLWDINAAPKN-------------------KSL--------------EAMQI-FKVHEGVVEDV 233 (424)
Q Consensus 189 ~~~-~~l~s~~~dg~i~vwd~~~~~~~-------------------~~~--------------~~~~~-~~~~~~~v~~i 233 (424)
++. .+|++++.||.|++||+...... ..+ .+... ..+|...|.++
T Consensus 104 ~~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~ 183 (447)
T 3dw8_B 104 QKNAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHINSI 183 (447)
T ss_dssp CCSSSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCCEE
T ss_pred CCCcceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcceEEE
Confidence 873 37999999999999998653210 000 00112 35799999999
Q ss_pred EeeCCCCcEEEEEeCCCeEEEEECCCCCCCCCee-------EecccCCCeeEEEecCCCCeEEEEEeCCCcEEEEECCCC
Q 014472 234 AWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQ-------SVVAHQSEVNCLAFNPFNEWILATGSTDKTVKLFDLRKI 306 (424)
Q Consensus 234 ~~~~~~~~~~~s~~~dg~i~i~d~~~~~~~~~~~-------~~~~~~~~v~~i~~~~~~~~~l~~g~~dg~i~iwd~~~~ 306 (424)
+|+|++. +|++| .|+.|++||++.... .+. .+..|...|++++|+|++..+|++|+.||.|++||+++
T Consensus 184 ~~~~~~~-~l~s~-~d~~i~iwd~~~~~~--~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~- 258 (447)
T 3dw8_B 184 SINSDYE-TYLSA-DDLRINLWHLEITDR--SFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDMRA- 258 (447)
T ss_dssp EECTTSS-EEEEE-CSSEEEEEETTEEEE--EEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEEEETTT-
T ss_pred EEcCCCC-EEEEe-CCCeEEEEECCCCCc--eeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeEEEEECcC-
Confidence 9999986 55677 799999999984321 122 35679999999999999844799999999999999998
Q ss_pred CCc----ceeecCCCC------------CEEEEEEcCCCCcEEEEEeCCCeEEEeeCCCCCcccCCCccCCCCCeeeEEE
Q 014472 307 STA----LHTFDSHKE------------EVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPEDAEDGPPELLFIH 370 (424)
Q Consensus 307 ~~~----~~~~~~~~~------------~v~~~~~sp~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 370 (424)
... +..+..|.. .|.+++|+|++. +|++++. +.|++||++... .++..+
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~-~l~~~~~-~~v~iwd~~~~~-------------~~~~~~ 323 (447)
T 3dw8_B 259 SALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGR-YMMTRDY-LSVKVWDLNMEN-------------RPVETY 323 (447)
T ss_dssp CSSSCTTCEEECCC-----CCHHHHHTTCEEEEEECTTSS-EEEEEES-SEEEEEETTCCS-------------SCSCCE
T ss_pred CccccceeeEeccCCCccccccccccCceEEEEEECCCCC-EEEEeeC-CeEEEEeCCCCc-------------ccccee
Confidence 444 678888876 999999999996 7888888 999999998622 233344
Q ss_pred cCCCCC---------------cceEEeCCCCCcEEEEEeCCCcEEEEecCCCCC
Q 014472 371 GGHTSK---------------ISDFSWNPCEDWVISSVAEDNILQIWQMAENIY 409 (424)
Q Consensus 371 ~~h~~~---------------v~~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~ 409 (424)
.+|... +..++|+|+++ +|++++.||.|+|||+.++..
T Consensus 324 ~~~~~~~~~l~~~~~~~~i~~~~~~~~s~~~~-~l~s~s~dg~v~iwd~~~~~~ 376 (447)
T 3dw8_B 324 QVHEYLRSKLCSLYENDCIFDKFECCWNGSDS-VVMTGSYNNFFRMFDRNTKRD 376 (447)
T ss_dssp ESCGGGTTTHHHHHHTSGGGCCCCEEECTTSS-EEEEECSTTEEEEEETTTCCE
T ss_pred eccccccccccccccccccccceEEEECCCCC-EEEEeccCCEEEEEEcCCCcc
Confidence 555431 23499999999 689999999999999988743
No 65
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=100.00 E-value=5.1e-34 Score=265.75 Aligned_cols=259 Identities=17% Similarity=0.258 Sum_probs=199.3
Q ss_pred EEeccCCceeEEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEE--ecCCCCeeeEEecCCCCceEEEE
Q 014472 120 QQINHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRL--RGHSTEGYGLSWSKFKEGHLLSG 197 (424)
Q Consensus 120 ~~~~h~~~v~~i~~~p~~~~~latg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~--~~h~~~v~~l~~~~~~~~~l~s~ 197 (424)
...+|.+.|++++|+|++..+||+|+.||.|+|||+.. ......+ .+|...|.+++|+|++..+|+++
T Consensus 68 ~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~----------~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~ 137 (383)
T 3ei3_B 68 TASPFDRRVTSLEWHPTHPTTVAVGSKGGDIILWDYDV----------QNKTSFIQGMGPGDAITGMKFNQFNTNQLFVS 137 (383)
T ss_dssp EECCCSSCEEEEEECSSCTTEEEEEEBTSCEEEEETTS----------TTCEEEECCCSTTCBEEEEEEETTEEEEEEEE
T ss_pred eccCCCCCEEEEEECCCCCCEEEEEcCCCeEEEEeCCC----------cccceeeecCCcCCceeEEEeCCCCCCEEEEE
Confidence 34579999999999999855999999999999999987 2233333 46999999999999544489999
Q ss_pred eCCCcEEEEeCCCCCCCCcccceeeeecCCcceeeEEeeCCCCcEEEEEeCCCeEEEEECCCCCCCCCeeEecccCCCee
Q 014472 198 SDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVN 277 (424)
Q Consensus 198 ~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~ 277 (424)
+.||.|++||+... ..........|...|.+++|+|++. +|++++.|+.|++||++. .++..+..|...|.
T Consensus 138 ~~d~~i~iwd~~~~----~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~i~i~d~~~----~~~~~~~~h~~~v~ 208 (383)
T 3ei3_B 138 SIRGATTLRDFSGS----VIQVFAKTDSWDYWYCCVDVSVSRQ-MLATGDSTGRLLLLGLDG----HEIFKEKLHKAKVT 208 (383)
T ss_dssp ETTTEEEEEETTSC----EEEEEECCCCSSCCEEEEEEETTTT-EEEEEETTSEEEEEETTS----CEEEEEECSSSCEE
T ss_pred eCCCEEEEEECCCC----ceEEEeccCCCCCCeEEEEECCCCC-EEEEECCCCCEEEEECCC----CEEEEeccCCCcEE
Confidence 99999999999842 2222222334558899999999987 567999999999999942 34777888999999
Q ss_pred EEEecCCCCeEEEEEeCCCcEEEEECCCCC---CcceeecCCCCCEEEEEEcC-CCCcEEEEEeCCCeEEEeeCCCCCcc
Q 014472 278 CLAFNPFNEWILATGSTDKTVKLFDLRKIS---TALHTFDSHKEEVFQVGWNP-KNETILASCCLGRRLMVWDLSRIDEE 353 (424)
Q Consensus 278 ~i~~~~~~~~~l~~g~~dg~i~iwd~~~~~---~~~~~~~~~~~~v~~~~~sp-~~~~~l~s~~~dg~i~iwd~~~~~~~ 353 (424)
+++|+|+++++|++|+.|+.|++||+++.. .++..+ .|...|.+++|+| ++. +|++++.|+.|++||+++....
T Consensus 209 ~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~-~l~~~~~d~~i~iwd~~~~~~~ 286 (383)
T 3ei3_B 209 HAEFNPRCDWLMATSSVDATVKLWDLRNIKDKNSYIAEM-PHEKPVNAAYFNPTDST-KLLTTDQRNEIRVYSSYDWSKP 286 (383)
T ss_dssp EEEECSSCTTEEEEEETTSEEEEEEGGGCCSTTCEEEEE-ECSSCEEEEEECTTTSC-EEEEEESSSEEEEEETTBTTSC
T ss_pred EEEECCCCCCEEEEEeCCCEEEEEeCCCCCcccceEEEe-cCCCceEEEEEcCCCCC-EEEEEcCCCcEEEEECCCCccc
Confidence 999999998679999999999999998632 334444 6899999999999 885 7999999999999999886543
Q ss_pred cCCCccCCCCCeeeEEEcCCCC----------CcceEEeCCCCCcEEEEEeCCCcEEEEecCCCCC
Q 014472 354 QTPEDAEDGPPELLFIHGGHTS----------KISDFSWNPCEDWVISSVAEDNILQIWQMAENIY 409 (424)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~~h~~----------~v~~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~ 409 (424)
....... .....|.. .+..++|+|++++ +++.|+.|+|||+.++..
T Consensus 287 ~~~~~~~-------~~~~~~~~~~~~~~~p~~~~~~~~~s~dg~~---s~s~d~~i~iwd~~~~~~ 342 (383)
T 3ei3_B 287 DQIIIHP-------HRQFQHLTPIKATWHPMYDLIVAGRYPDDQL---LLNDKRTIDIYDANSGGL 342 (383)
T ss_dssp SEEEECC-------BCCCTTSCCCCCEECSSSSEEEEECBCCTTT---CTTCCCCEEEEETTTCCE
T ss_pred ccccccc-------ccccccccceEEeccCCCCceEEEecCCccc---ccCCCCeEEEEecCCCce
Confidence 2211000 00012222 3344666666662 667899999999987743
No 66
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=100.00 E-value=6.8e-34 Score=266.73 Aligned_cols=258 Identities=19% Similarity=0.304 Sum_probs=209.1
Q ss_pred CceeEEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCCeeeEEecC-CCCceEEEEeCCCcEE
Q 014472 126 GEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSK-FKEGHLLSGSDDAQIC 204 (424)
Q Consensus 126 ~~v~~i~~~p~~~~~latg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~-~~~~~l~s~~~dg~i~ 204 (424)
.....++++|+...++++|+.+|.|+||++...... ......+.+|.+.|.+++|+| ++. +|++|+.||.|+
T Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~------~~~~~~~~~h~~~V~~~~~~p~~~~-~l~s~s~dg~v~ 107 (402)
T 2aq5_A 35 WDSGFCAVNPKFMALICEASGGGAFLVLPLGKTGRV------DKNVPLVCGHTAPVLDIAWCPHNDN-VIASGSEDCTVM 107 (402)
T ss_dssp CSSCSEEECSSEEEEEBCCSSSCCEEEEETTCCEEC------CTTCCCBCCCSSCEEEEEECTTCTT-EEEEEETTSEEE
T ss_pred cCCCcEEECCCeEEEEEEEcCCCEEEEEECccCCCC------CCCCceEecCCCCEEEEEeCCCCCC-EEEEEeCCCeEE
Confidence 345568999987666777899999999999652111 123445778999999999999 555 899999999999
Q ss_pred EEeCCCCCCCCcc-cceeeeecCCcceeeEEeeCCCCcEEEEEeCCCeEEEEECCCCCCCCCeeEe--cccCCCeeEEEe
Q 014472 205 LWDINAAPKNKSL-EAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSV--VAHQSEVNCLAF 281 (424)
Q Consensus 205 vwd~~~~~~~~~~-~~~~~~~~~~~~v~~i~~~~~~~~~~~s~~~dg~i~i~d~~~~~~~~~~~~~--~~~~~~v~~i~~ 281 (424)
+||+.++...... .++..+.+|...|.+++|+|++..+|++++.||.|++||+++++. +..+ ..|...|++++|
T Consensus 108 vw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~---~~~~~~~~~~~~v~~~~~ 184 (402)
T 2aq5_A 108 VWEIPDGGLVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAA---VLTLGPDVHPDTIYSVDW 184 (402)
T ss_dssp EEECCTTCCSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETTSCEEEEETTTTEE---EEEECTTTCCSCEEEEEE
T ss_pred EEEccCCCCccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCCCEEEEEECCCCCc---cEEEecCCCCCceEEEEE
Confidence 9999876432211 345667889999999999999877888999999999999998653 6667 789999999999
Q ss_pred cCCCCeEEEEEeCCCcEEEEECCCCCCcceee-cCCCCC-EEEEEEcCCCCcEEEEE---eCCCeEEEeeCCCCCcccCC
Q 014472 282 NPFNEWILATGSTDKTVKLFDLRKISTALHTF-DSHKEE-VFQVGWNPKNETILASC---CLGRRLMVWDLSRIDEEQTP 356 (424)
Q Consensus 282 ~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~-~~~~~~-v~~~~~sp~~~~~l~s~---~~dg~i~iwd~~~~~~~~~~ 356 (424)
+|++. +|++++.||.|++||+++ +..+..+ ..|.+. +.++.|+|++. +|++| +.|+.|++||++....
T Consensus 185 ~~~~~-~l~~~~~d~~i~iwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~g~~~~~d~~i~iwd~~~~~~---- 257 (402)
T 2aq5_A 185 SRDGA-LICTSCRDKRVRVIEPRK-GTVVAEKDRPHEGTRPVHAVFVSEGK-ILTTGFSRMSERQVALWDTKHLEE---- 257 (402)
T ss_dssp CTTSS-CEEEEETTSEEEEEETTT-TEEEEEEECSSCSSSCCEEEECSTTE-EEEEEECTTCCEEEEEEETTBCSS----
T ss_pred CCCCC-EEEEEecCCcEEEEeCCC-CceeeeeccCCCCCcceEEEEcCCCc-EEEEeccCCCCceEEEEcCccccC----
Confidence 99888 599999999999999998 6777777 678776 89999999985 78888 7899999999987542
Q ss_pred CccCCCCCeeeEEEcCCCCCcceEEeCCCCCcEEEEEeCCCcEEEEecCCCC
Q 014472 357 EDAEDGPPELLFIHGGHTSKISDFSWNPCEDWVISSVAEDNILQIWQMAENI 408 (424)
Q Consensus 357 ~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~ 408 (424)
........|...+..++|+|++.+++++++.||.|++|++.++.
T Consensus 258 --------~~~~~~~~~~~~v~~~~~s~~~~~l~~~g~~dg~i~i~d~~~~~ 301 (402)
T 2aq5_A 258 --------PLSLQELDTSSGVLLPFFDPDTNIVYLCGKGDSSIRYFEITSEA 301 (402)
T ss_dssp --------CSEEEECCCCSSCEEEEEETTTTEEEEEETTCSCEEEEEECSST
T ss_pred --------CceEEeccCCCceeEEEEcCCCCEEEEEEcCCCeEEEEEecCCC
Confidence 11222235667899999999999655677789999999998765
No 67
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.5e-34 Score=290.31 Aligned_cols=260 Identities=19% Similarity=0.304 Sum_probs=214.3
Q ss_pred EeccCCceeEEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCCeeeEEecCC--CCceEEEEe
Q 014472 121 QINHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKF--KEGHLLSGS 198 (424)
Q Consensus 121 ~~~h~~~v~~i~~~p~~~~~latg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~--~~~~l~s~~ 198 (424)
..+|.+.|++++|+|++. +||+|+.||.|+||++.. ........+.+|.+.|++++|+|+ +. +|++|+
T Consensus 5 l~gH~~~V~~l~~s~dg~-~latg~~dg~I~vwd~~~--------~~~~~~~~l~~h~~~V~~l~~s~~~~~~-~l~s~s 74 (753)
T 3jro_A 5 ANAHNELIHDAVLDYYGK-RLATCSSDKTIKIFEVEG--------ETHKLIDTLTGHEGPVWRVDWAHPKFGT-ILASCS 74 (753)
T ss_dssp ---CCCCEEEECCCSSSC-CEEEEETTTEEEEEEEET--------TEEEEEEEECCCSSCEEEEEECCTTSCS-EEEEEE
T ss_pred cccCcceeEEEEECCCCC-eEEEEECCCcEEEEecCC--------CCCccceeccCCcCceEEEEecCCCCCC-EEEEEe
Confidence 347999999999999987 799999999999999874 234556778899999999999987 55 899999
Q ss_pred CCCcEEEEeCCCCCCCCcccceeeeecCCcceeeEEeeCC--CCcEEEEEeCCCeEEEEECCCCCCCCCeeEecccCCCe
Q 014472 199 DDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLR--HEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEV 276 (424)
Q Consensus 199 ~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~--~~~~~~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v 276 (424)
.||.|++||+.++. ......+..|...|.+++|+|+ +. ++++|+.||.|++||++.... .....+..|...|
T Consensus 75 ~Dg~I~vwd~~~~~----~~~~~~~~~h~~~V~~v~~sp~~~~~-~l~sgs~dg~I~vwdl~~~~~-~~~~~~~~~~~~v 148 (753)
T 3jro_A 75 YDGKVLIWKEENGR----WSQIAVHAVHSASVNSVQWAPHEYGP-LLLVASSDGKVSVVEFKENGT-TSPIIIDAHAIGV 148 (753)
T ss_dssp TTSCEEEEEEETTE----EEEEEEECCCSSCEEEEEECCGGGCS-EEEEEETTSEEEEEECCSSSC-CCCEEEECCSSCE
T ss_pred CCCeEEEEECCCCc----ccccccccCCCCCeEEEEECCCCCCC-EEEEEeCCCcEEEEEeecCCC-cceeEeecCCCce
Confidence 99999999998652 2245667789999999999998 65 677999999999999998753 2344667899999
Q ss_pred eEEEecCC-------------CCeEEEEEeCCCcEEEEECCCCC---CcceeecCCCCCEEEEEEcCCC--CcEEEEEeC
Q 014472 277 NCLAFNPF-------------NEWILATGSTDKTVKLFDLRKIS---TALHTFDSHKEEVFQVGWNPKN--ETILASCCL 338 (424)
Q Consensus 277 ~~i~~~~~-------------~~~~l~~g~~dg~i~iwd~~~~~---~~~~~~~~~~~~v~~~~~sp~~--~~~l~s~~~ 338 (424)
.+++|+|. +. +|++|+.||.|++||++... .+...+.+|...|++++|+|++ ..+|++++.
T Consensus 149 ~~l~~~p~~~~~~~~~~~~~d~~-~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~~~~l~s~s~ 227 (753)
T 3jro_A 149 NSASWAPATIEEDGEHNGTKESR-KFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQ 227 (753)
T ss_dssp EEEEECCCC---------CGGGC-CEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEES
T ss_pred EEEEecCcccccccccccCCCCC-EEEEEECCCeEEEEeccCCcccceeeeeecCCCCcEEEEEeccCCCCCCEEEEEec
Confidence 99999994 55 69999999999999998743 4556778999999999999993 358999999
Q ss_pred CCeEEEeeCCCCCcccCCCccCCCCCeeeEEEcCCCCCcceEEeCCCCCcEEEEEeCCCcEEEEecCCC
Q 014472 339 GRRLMVWDLSRIDEEQTPEDAEDGPPELLFIHGGHTSKISDFSWNPCEDWVISSVAEDNILQIWQMAEN 407 (424)
Q Consensus 339 dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iw~~~~~ 407 (424)
||.|++||++....... ..+....+|...|++++|+|+++ +|++++.||.|++|++..+
T Consensus 228 Dg~I~iwd~~~~~~~~~---------~~~~~~~~~~~~v~~l~~spdg~-~l~s~s~Dg~I~vwd~~~~ 286 (753)
T 3jro_A 228 DRTCIIWTQDNEQGPWK---------KTLLKEEKFPDVLWRASWSLSGN-VLALSGGDNKVTLWKENLE 286 (753)
T ss_dssp SSCEEEEEESSSSSCCB---------CCBSSSSCCSSCCCCEEECTTTC-CEEEECSSSCEECCBCCSS
T ss_pred CCEEEEecCCCCCCcce---------eEEeccCCCCCceEEEEEcCCCC-EEEEEcCCCEEEEEecCCC
Confidence 99999999987532110 12223356888999999999999 5899999999999999853
No 68
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=100.00 E-value=6.9e-33 Score=261.22 Aligned_cols=254 Identities=13% Similarity=0.205 Sum_probs=202.2
Q ss_pred ccCCceeEEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCCeeeEEecCCCCceEEEEeCCCc
Q 014472 123 NHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDDAQ 202 (424)
Q Consensus 123 ~h~~~v~~i~~~p~~~~~latg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~ 202 (424)
.|.+.|++++|+|++. +|++|+.||.|++||+.. ......+.+|...|.+++|+|++. +|++++.||.
T Consensus 137 ~h~~~v~~~~~~~~~~-~l~s~s~d~~i~iwd~~~----------~~~~~~~~~h~~~v~~~~~~~~~~-~l~s~~~d~~ 204 (420)
T 3vl1_A 137 AHVSEITKLKFFPSGE-ALISSSQDMQLKIWSVKD----------GSNPRTLIGHRATVTDIAIIDRGR-NVLSASLDGT 204 (420)
T ss_dssp SSSSCEEEEEECTTSS-EEEEEETTSEEEEEETTT----------CCCCEEEECCSSCEEEEEEETTTT-EEEEEETTSC
T ss_pred cccCccEEEEECCCCC-EEEEEeCCCeEEEEeCCC----------CcCceEEcCCCCcEEEEEEcCCCC-EEEEEcCCCc
Confidence 7999999999999886 899999999999999987 455678899999999999999887 7999999999
Q ss_pred EEEEeCCCCCCCCcccceeeeec------------------------CCcceeeEEeeCCCCcEEEEEeCCCeEEEEECC
Q 014472 203 ICLWDINAAPKNKSLEAMQIFKV------------------------HEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLR 258 (424)
Q Consensus 203 i~vwd~~~~~~~~~~~~~~~~~~------------------------~~~~v~~i~~~~~~~~~~~s~~~dg~i~i~d~~ 258 (424)
|++||++++.. +..+.. +...+.+++|+|++. ++++++.||.|++||++
T Consensus 205 v~iwd~~~~~~------~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~-~l~~~~~dg~i~i~d~~ 277 (420)
T 3vl1_A 205 IRLWECGTGTT------IHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGK-YVIAGHVSGVITVHNVF 277 (420)
T ss_dssp EEEEETTTTEE------EEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTE-EEEEEETTSCEEEEETT
T ss_pred EEEeECCCCce------eEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCCC-EEEEEcCCCeEEEEECC
Confidence 99999987632 222222 235566666778875 56799999999999999
Q ss_pred CCCCCCCeeEe-cccCCCeeEEEecCCCCeEEEEEeCCCcEEEEECCCCCCcceeecC-CCCCEEEEEEcCCCCcEEEEE
Q 014472 259 TPSVSKPVQSV-VAHQSEVNCLAFNPFNEWILATGSTDKTVKLFDLRKISTALHTFDS-HKEEVFQVGWNPKNETILASC 336 (424)
Q Consensus 259 ~~~~~~~~~~~-~~~~~~v~~i~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~-~~~~v~~~~~sp~~~~~l~s~ 336 (424)
++.. +..+ ..|...|++++|+|++..+|++|+.||.|++||+++...++..+.. |...|.++.|. ++ .+|+++
T Consensus 278 ~~~~---~~~~~~~~~~~v~~~~~~~~~~~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~~-~~-~~l~s~ 352 (420)
T 3vl1_A 278 SKEQ---TIQLPSKFTCSCNSLTVDGNNANYIYAGYENGMLAQWDLRSPECPVGEFLINEGTPINNVYFA-AG-ALFVSS 352 (420)
T ss_dssp TCCE---EEEECCTTSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEEESTTSCEEEEEEE-TT-EEEEEE
T ss_pred CCce---eEEcccccCCCceeEEEeCCCCCEEEEEeCCCeEEEEEcCCCcCchhhhhccCCCCceEEEeC-CC-CEEEEe
Confidence 8663 3333 4578899999999999867999999999999999986666777776 67788888665 55 479999
Q ss_pred eCCCeEEEeeCCCCCcccCCCccCCCCCeeeEEEcCCCCCcceEEeCCCCC---cEEEEEeCCCcEEEEecCC
Q 014472 337 CLGRRLMVWDLSRIDEEQTPEDAEDGPPELLFIHGGHTSKISDFSWNPCED---WVISSVAEDNILQIWQMAE 406 (424)
Q Consensus 337 ~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~---~~l~s~~~d~~i~iw~~~~ 406 (424)
+.|+.|++|++........... ........+|...|.+++|+|++. .+++ ++.+|.+.+|++..
T Consensus 353 ~~d~~v~iw~~~~~~~~~~~~~-----~~~~~~~~~~~~~v~~~~~s~~~~~~g~l~a-~g~~g~~~~~~~~~ 419 (420)
T 3vl1_A 353 GFDTSIKLDIISDPESERPAIE-----FETPTFLVSNDDAVSQFCYVSDDESNGEVLE-VGKNNFCALYNLSN 419 (420)
T ss_dssp TTTEEEEEEEECCTTCCSCEEC-----TTSCEEECCSSCCCCEEEEECCSSSSCEEEE-EETTTEEEEEESCC
T ss_pred cCCccEEEEeccCCCCCcccee-----ccCccEEccCCcceEEEEEccCCCCcceEEE-EcCCceEEEEeccC
Confidence 9999999999987433221110 011233567888999999999998 5454 56789999999864
No 69
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=100.00 E-value=4.8e-33 Score=284.20 Aligned_cols=250 Identities=24% Similarity=0.368 Sum_probs=216.4
Q ss_pred EeccCCceeEEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCCeeeEEecCCCCceEEEEeCC
Q 014472 121 QINHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDD 200 (424)
Q Consensus 121 ~~~h~~~v~~i~~~p~~~~~latg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~d 200 (424)
..+|.+.|.+++|+|+++ +||+|+.+|.|+|||+.+ ......+.+|...|.+++|+|++. +|++|+.|
T Consensus 9 ~~~h~~~v~~i~~sp~~~-~la~~~~~g~v~iwd~~~----------~~~~~~~~~~~~~v~~~~~s~~~~-~l~~~~~d 76 (814)
T 3mkq_A 9 FSNRSDRVKGIDFHPTEP-WVLTTLYSGRVEIWNYET----------QVEVRSIQVTETPVRAGKFIARKN-WIIVGSDD 76 (814)
T ss_dssp EEEECSCEEEEEECSSSS-EEEEEETTSEEEEEETTT----------TEEEEEEECCSSCEEEEEEEGGGT-EEEEEETT
T ss_pred eecCCCceEEEEECCCCC-EEEEEeCCCEEEEEECCC----------CceEEEEecCCCcEEEEEEeCCCC-EEEEEeCC
Confidence 347999999999999987 899999999999999987 456678889999999999999887 79999999
Q ss_pred CcEEEEeCCCCCCCCcccceeeeecCCcceeeEEeeCCCCcEEEEEeCCCeEEEEECCCCCCCCCeeEecccCCCeeEEE
Q 014472 201 AQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLA 280 (424)
Q Consensus 201 g~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~ 280 (424)
|.|++||+.++ ..+..+.+|...|++++|+|+++. +++++.||.|++||++++.. ....+..|...|.+++
T Consensus 77 g~i~vw~~~~~------~~~~~~~~~~~~v~~~~~s~~~~~-l~~~~~dg~i~vw~~~~~~~--~~~~~~~~~~~v~~~~ 147 (814)
T 3mkq_A 77 FRIRVFNYNTG------EKVVDFEAHPDYIRSIAVHPTKPY-VLSGSDDLTVKLWNWENNWA--LEQTFEGHEHFVMCVA 147 (814)
T ss_dssp SEEEEEETTTC------CEEEEEECCSSCEEEEEECSSSSE-EEEEETTSEEEEEEGGGTSE--EEEEEECCSSCEEEEE
T ss_pred CeEEEEECCCC------cEEEEEecCCCCEEEEEEeCCCCE-EEEEcCCCEEEEEECCCCce--EEEEEcCCCCcEEEEE
Confidence 99999999876 345667789999999999999974 56999999999999987532 3566778999999999
Q ss_pred ecCCCCeEEEEEeCCCcEEEEECCCCCCcceeecC-CCCCEEEEEEcC--CCCcEEEEEeCCCeEEEeeCCCCCcccCCC
Q 014472 281 FNPFNEWILATGSTDKTVKLFDLRKISTALHTFDS-HKEEVFQVGWNP--KNETILASCCLGRRLMVWDLSRIDEEQTPE 357 (424)
Q Consensus 281 ~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~-~~~~v~~~~~sp--~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~ 357 (424)
|+|.+..+|++++.||.|++||++. ..+...+.. +...+.+++|+| ++. +|++++.||.|++||+..+
T Consensus 148 ~~p~~~~~l~~~~~dg~v~vwd~~~-~~~~~~~~~~~~~~v~~~~~~~~~~~~-~l~~~~~dg~i~~~d~~~~------- 218 (814)
T 3mkq_A 148 FNPKDPSTFASGCLDRTVKVWSLGQ-STPNFTLTTGQERGVNYVDYYPLPDKP-YMITASDDLTIKIWDYQTK------- 218 (814)
T ss_dssp EETTEEEEEEEEETTSEEEEEETTC-SSCSEEEECCCTTCCCEEEECCSTTCC-EEEEECTTSEEEEEETTTT-------
T ss_pred EEcCCCCEEEEEeCCCeEEEEECCC-CcceeEEecCCCCCEEEEEEEECCCCC-EEEEEeCCCEEEEEECCCC-------
Confidence 9994334799999999999999987 455555554 448999999999 775 7999999999999999864
Q ss_pred ccCCCCCeeeEEEcCCCCCcceEEeCCCCCcEEEEEeCCCcEEEEecCCCC
Q 014472 358 DAEDGPPELLFIHGGHTSKISDFSWNPCEDWVISSVAEDNILQIWQMAENI 408 (424)
Q Consensus 358 ~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~ 408 (424)
..+..+.+|...|.+++|+|+++ +|++++.||.|++|++.++.
T Consensus 219 -------~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~dg~v~vwd~~~~~ 261 (814)
T 3mkq_A 219 -------SCVATLEGHMSNVSFAVFHPTLP-IIISGSEDGTLKIWNSSTYK 261 (814)
T ss_dssp -------EEEEEEECCSSCEEEEEECSSSS-EEEEEETTSCEEEEETTTCS
T ss_pred -------cEEEEEcCCCCCEEEEEEcCCCC-EEEEEeCCCeEEEEECCCCc
Confidence 55777788999999999999999 79999999999999998764
No 70
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=100.00 E-value=1.4e-33 Score=266.02 Aligned_cols=244 Identities=15% Similarity=0.145 Sum_probs=195.2
Q ss_pred CceeEEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCCeeeEEecCCCCceEEEEeCCCcEEE
Q 014472 126 GEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDDAQICL 205 (424)
Q Consensus 126 ~~v~~i~~~p~~~~~latg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~v 205 (424)
..+....|+|++. +||+|+.||.|++||+.. ......+.+|...|.+++|+|++. +|++|+.||.|++
T Consensus 98 ~~~~~~~~~~~~~-~l~~~~~dg~i~iwd~~~----------~~~~~~~~~h~~~v~~~~~~~~~~-~l~s~s~d~~i~i 165 (420)
T 3vl1_A 98 DYTAVDTAKLQMR-RFILGTTEGDIKVLDSNF----------NLQREIDQAHVSEITKLKFFPSGE-ALISSSQDMQLKI 165 (420)
T ss_dssp CEEEEEEECSSSC-EEEEEETTSCEEEECTTS----------CEEEEETTSSSSCEEEEEECTTSS-EEEEEETTSEEEE
T ss_pred CceEEEEEecCCC-EEEEEECCCCEEEEeCCC----------cceeeecccccCccEEEEECCCCC-EEEEEeCCCeEEE
Confidence 3444557788876 899999999999999876 344555678999999999999887 8999999999999
Q ss_pred EeCCCCCCCCcccceeeeecCCcceeeEEeeCCCCcEEEEEeCCCeEEEEECCCCCCCCCeeEecc---cC---------
Q 014472 206 WDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVA---HQ--------- 273 (424)
Q Consensus 206 wd~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~~s~~~dg~i~i~d~~~~~~~~~~~~~~~---~~--------- 273 (424)
||+.++. .+..+.+|...|.+++|+|++. +|++++.||.|++||+++++. +..+.. +.
T Consensus 166 wd~~~~~------~~~~~~~h~~~v~~~~~~~~~~-~l~s~~~d~~v~iwd~~~~~~---~~~~~~~~~~~~~v~~~~~~ 235 (420)
T 3vl1_A 166 WSVKDGS------NPRTLIGHRATVTDIAIIDRGR-NVLSASLDGTIRLWECGTGTT---IHTFNRKENPHDGVNSIALF 235 (420)
T ss_dssp EETTTCC------CCEEEECCSSCEEEEEEETTTT-EEEEEETTSCEEEEETTTTEE---EEEECBTTBTTCCEEEEEEE
T ss_pred EeCCCCc------CceEEcCCCCcEEEEEEcCCCC-EEEEEcCCCcEEEeECCCCce---eEEeecCCCCCCCccEEEEe
Confidence 9998763 3456678999999999999986 566999999999999998653 444432 33
Q ss_pred ------------CCeeEEEecCCCCeEEEEEeCCCcEEEEECCCCCCcceeecCCCCCEEEEEEcCCCCcEEEEEeCCCe
Q 014472 274 ------------SEVNCLAFNPFNEWILATGSTDKTVKLFDLRKISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRR 341 (424)
Q Consensus 274 ------------~~v~~i~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~s~~~dg~ 341 (424)
..+.+++|+|++. +|++|+.||.|++||+++..........|...|.+++|+|+++.+|++++.||.
T Consensus 236 ~~~~~~~~~~~~~~v~~~~~s~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~g~~dg~ 314 (420)
T 3vl1_A 236 VGTDRQLHEISTSKKNNLEFGTYGK-YVIAGHVSGVITVHNVFSKEQTIQLPSKFTCSCNSLTVDGNNANYIYAGYENGM 314 (420)
T ss_dssp ECCCSSCGGGCCCCCCTTCSSCTTE-EEEEEETTSCEEEEETTTCCEEEEECCTTSSCEEEEEECSSCTTEEEEEETTSE
T ss_pred cCCcceeeecccCcccceEEcCCCC-EEEEEcCCCeEEEEECCCCceeEEcccccCCCceeEEEeCCCCCEEEEEeCCCe
Confidence 4455566678776 699999999999999998444444445688999999999999768999999999
Q ss_pred EEEeeCCCCCcccCCCccCCCCCeeeEEEcC-CCCCcceEEeCCCCCcEEEEEeCCCcEEEEecCCC
Q 014472 342 LMVWDLSRIDEEQTPEDAEDGPPELLFIHGG-HTSKISDFSWNPCEDWVISSVAEDNILQIWQMAEN 407 (424)
Q Consensus 342 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~-h~~~v~~~~~~~~~~~~l~s~~~d~~i~iw~~~~~ 407 (424)
|++||++... .++..+.+ |...|..+.| +++. +|++++.|+.|++|++...
T Consensus 315 i~vwd~~~~~-------------~~~~~~~~~~~~~v~~~~~-~~~~-~l~s~~~d~~v~iw~~~~~ 366 (420)
T 3vl1_A 315 LAQWDLRSPE-------------CPVGEFLINEGTPINNVYF-AAGA-LFVSSGFDTSIKLDIISDP 366 (420)
T ss_dssp EEEEETTCTT-------------SCSEEEEESTTSCEEEEEE-ETTE-EEEEETTTEEEEEEEECCT
T ss_pred EEEEEcCCCc-------------CchhhhhccCCCCceEEEe-CCCC-EEEEecCCccEEEEeccCC
Confidence 9999998753 22333333 6677888866 4666 7999999999999999873
No 71
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=100.00 E-value=1.4e-33 Score=264.58 Aligned_cols=260 Identities=18% Similarity=0.271 Sum_probs=207.0
Q ss_pred eccCCceeEEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCCeeeEEecCCCCceEEEEeCCC
Q 014472 122 INHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDDA 201 (424)
Q Consensus 122 ~~h~~~v~~i~~~p~~~~~latg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg 201 (424)
.+|.+.|++++|+|.+..+||+|+.||.|+||++....... ....+...+.+|...|.+++|+|++..+|++|+.||
T Consensus 78 ~~h~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~~~~---~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg 154 (402)
T 2aq5_A 78 CGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLVL---PLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCDN 154 (402)
T ss_dssp CCCSSCEEEEEECTTCTTEEEEEETTSEEEEEECCTTCCSS---CBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETTS
T ss_pred ecCCCCEEEEEeCCCCCCEEEEEeCCCeEEEEEccCCCCcc---ccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCCC
Confidence 36999999999999434599999999999999998731111 011567789999999999999999866899999999
Q ss_pred cEEEEeCCCCCCCCcccceeee--ecCCcceeeEEeeCCCCcEEEEEeCCCeEEEEECCCCCCCCCeeEe-cccCCC-ee
Q 014472 202 QICLWDINAAPKNKSLEAMQIF--KVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSV-VAHQSE-VN 277 (424)
Q Consensus 202 ~i~vwd~~~~~~~~~~~~~~~~--~~~~~~v~~i~~~~~~~~~~~s~~~dg~i~i~d~~~~~~~~~~~~~-~~~~~~-v~ 277 (424)
.|++||+.++ ..+..+ ..|...|.+++|+|++. +|++++.||.|++||++++.. +..+ ..|... +.
T Consensus 155 ~i~iwd~~~~------~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~i~iwd~~~~~~---~~~~~~~~~~~~~~ 224 (402)
T 2aq5_A 155 VILVWDVGTG------AAVLTLGPDVHPDTIYSVDWSRDGA-LICTSCRDKRVRVIEPRKGTV---VAEKDRPHEGTRPV 224 (402)
T ss_dssp CEEEEETTTT------EEEEEECTTTCCSCEEEEEECTTSS-CEEEEETTSEEEEEETTTTEE---EEEEECSSCSSSCC
T ss_pred EEEEEECCCC------CccEEEecCCCCCceEEEEECCCCC-EEEEEecCCcEEEEeCCCCce---eeeeccCCCCCcce
Confidence 9999999876 344555 67999999999999887 456999999999999998653 5565 577765 89
Q ss_pred EEEecCCCCeEEEEE---eCCCcEEEEECCCCCCcceeec-CCCCCEEEEEEcCCCCcEEEEEeCCCeEEEeeCCCCCcc
Q 014472 278 CLAFNPFNEWILATG---STDKTVKLFDLRKISTALHTFD-SHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEE 353 (424)
Q Consensus 278 ~i~~~~~~~~~l~~g---~~dg~i~iwd~~~~~~~~~~~~-~~~~~v~~~~~sp~~~~~l~s~~~dg~i~iwd~~~~~~~ 353 (424)
+++|+|++. +|++| +.|+.|++||+++...++.... .|...+.+++|+|++..++++++.||.|++||+......
T Consensus 225 ~~~~~~~~~-~l~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~g~~dg~i~i~d~~~~~~~ 303 (402)
T 2aq5_A 225 HAVFVSEGK-ILTTGFSRMSERQVALWDTKHLEEPLSLQELDTSSGVLLPFFDPDTNIVYLCGKGDSSIRYFEITSEAPF 303 (402)
T ss_dssp EEEECSTTE-EEEEEECTTCCEEEEEEETTBCSSCSEEEECCCCSSCEEEEEETTTTEEEEEETTCSCEEEEEECSSTTC
T ss_pred EEEEcCCCc-EEEEeccCCCCceEEEEcCccccCCceEEeccCCCceeEEEEcCCCCEEEEEEcCCCeEEEEEecCCCcc
Confidence 999999886 78888 7899999999998555454444 577889999999999755556778999999999875310
Q ss_pred cCCCccCCCCCeeeEEEcCCCCCcceEEeCCCCCcEEEEEeCCCcEEEEecCCCCC
Q 014472 354 QTPEDAEDGPPELLFIHGGHTSKISDFSWNPCEDWVISSVAEDNILQIWQMAENIY 409 (424)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~ 409 (424)
...+..+. |...|.+++|+|++.+ +++ .++.+++|++.++.+
T Consensus 304 ----------~~~l~~~~-~~~~v~~~~~sp~~~~-~~s--~~~~~~~~~l~~~~~ 345 (402)
T 2aq5_A 304 ----------LHYLSMFS-SKESQRGMGYMPKRGL-EVN--KCEIARFYKLHERKC 345 (402)
T ss_dssp ----------EEEEEEEC-CSSCCSEEEECCGGGS-CGG--GTEEEEEEEEETTEE
T ss_pred ----------eEeecccc-cCCcccceEEeccccc-cee--cceeEEEEEcCCCcE
Confidence 12333444 6688999999999984 544 567999999987643
No 72
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=5.2e-33 Score=252.28 Aligned_cols=217 Identities=25% Similarity=0.355 Sum_probs=187.5
Q ss_pred CCcEEEecCCCCeeeEEecCCCCceEEEEeCCCcEEEEeCCCCCCCCcccceeeeecCCcceeeEEeeCCCCcEEEEEeC
Q 014472 169 SPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGD 248 (424)
Q Consensus 169 ~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~~s~~~ 248 (424)
....++.+|.+.|.+++|+|++..+|++|+.|++|++|++..... ....++..+.+|...|.+++|+|++. ++++|+.
T Consensus 8 ~l~~~l~gH~~~V~~l~~~~~~~~~l~s~s~D~~v~~W~~~~~~~-~~~~~~~~~~~h~~~v~~~~~s~dg~-~l~s~s~ 85 (319)
T 3frx_A 8 VLRGTLEGHNGWVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQ-KFGVPVRSFKGHSHIVQDCTLTADGA-YALSASW 85 (319)
T ss_dssp EEEEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEEEEEETT-EEEEEEEEEECCSSCEEEEEECTTSS-EEEEEET
T ss_pred EEEEEEccccceEEEEEccCCCccEEEEecCCccEEEecCCCCCc-cccccceEEeCCcccEEEEEECCCCC-EEEEEeC
Confidence 345578899999999999998766899999999999999864322 11134567889999999999999987 5679999
Q ss_pred CCeEEEEECCCCCCCCCeeEecccCCCeeEEEecCCCCeEEEEEeCCCcEEEEECCCCCCcceeecCCCCCEEEEEEcCC
Q 014472 249 DQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATGSTDKTVKLFDLRKISTALHTFDSHKEEVFQVGWNPK 328 (424)
Q Consensus 249 dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~sp~ 328 (424)
|++|++||+++++. +..+.+|...|.+++|+|++. +|++|+.|++|++||++. ..+..+.+|...|.++.|+|.
T Consensus 86 D~~v~~wd~~~~~~---~~~~~~h~~~v~~~~~~~~~~-~l~s~s~D~~i~vwd~~~--~~~~~~~~h~~~v~~~~~~~~ 159 (319)
T 3frx_A 86 DKTLRLWDVATGET---YQRFVGHKSDVMSVDIDKKAS-MIISGSRDKTIKVWTIKG--QCLATLLGHNDWVSQVRVVPN 159 (319)
T ss_dssp TSEEEEEETTTTEE---EEEEECCSSCEEEEEECTTSC-EEEEEETTSCEEEEETTS--CEEEEECCCSSCEEEEEECCC
T ss_pred CCEEEEEECCCCCe---eEEEccCCCcEEEEEEcCCCC-EEEEEeCCCeEEEEECCC--CeEEEEeccCCcEEEEEEccC
Confidence 99999999998764 777889999999999999987 699999999999999974 678888999999999999995
Q ss_pred CC-----cEEEEEeCCCeEEEeeCCCCCcccCCCccCCCCCeeeEEEcCCCCCcceEEeCCCCCcEEEEEeCCCcEEEEe
Q 014472 329 NE-----TILASCCLGRRLMVWDLSRIDEEQTPEDAEDGPPELLFIHGGHTSKISDFSWNPCEDWVISSVAEDNILQIWQ 403 (424)
Q Consensus 329 ~~-----~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iw~ 403 (424)
.. .+|++++.|+.|++||++.. +....+.+|...|++++|+|+++ +|++++.||.|+|||
T Consensus 160 ~~~~~~~~~l~s~~~d~~i~~wd~~~~--------------~~~~~~~~h~~~v~~~~~sp~g~-~l~s~~~dg~i~iwd 224 (319)
T 3frx_A 160 EKADDDSVTIISAGNDKMVKAWNLNQF--------------QIEADFIGHNSNINTLTASPDGT-LIASAGKDGEIMLWN 224 (319)
T ss_dssp ------CCEEEEEETTSCEEEEETTTT--------------EEEEEECCCCSCEEEEEECTTSS-EEEEEETTCEEEEEE
T ss_pred CCCCCCccEEEEEeCCCEEEEEECCcc--------------hhheeecCCCCcEEEEEEcCCCC-EEEEEeCCCeEEEEE
Confidence 42 37999999999999999864 56677889999999999999999 799999999999999
Q ss_pred cCCCC
Q 014472 404 MAENI 408 (424)
Q Consensus 404 ~~~~~ 408 (424)
+.++.
T Consensus 225 ~~~~~ 229 (319)
T 3frx_A 225 LAAKK 229 (319)
T ss_dssp TTTTE
T ss_pred CCCCc
Confidence 98763
No 73
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=100.00 E-value=1.1e-32 Score=247.63 Aligned_cols=219 Identities=18% Similarity=0.335 Sum_probs=181.3
Q ss_pred EEEecCCCCeeeEEecCCCCceEEEEeCCCcEEEEeCCCCCCCCcccceeeeecCCcceeeEEeeCC-CCcEEEEEeCCC
Q 014472 172 LRLRGHSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLR-HEYLFGSVGDDQ 250 (424)
Q Consensus 172 ~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~-~~~~~~s~~~dg 250 (424)
..+.+|...|++++|+|++. +|++|+.|++|+|||+.... ...+..+.+|.+.|++++|++. ...+|++|+.|+
T Consensus 3 ~~~~~h~~~V~~~~~s~~g~-~las~s~D~~v~iw~~~~~~----~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~ 77 (297)
T 2pm7_B 3 VIANAHNEMIHDAVMDYYGK-RMATCSSDKTIKIFEVEGET----HKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDG 77 (297)
T ss_dssp EECCSCSSCEEEEEECTTSS-EEEEEETTSCEEEEEBCSSC----BCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTT
T ss_pred eeccCCcCceEEEEECCCCC-EEEEEeCCCEEEEEecCCCC----cEEEEEEccccCCeEEEEecCCCcCCEEEEEcCCC
Confidence 45678999999999999988 79999999999999997532 1345677899999999999864 235788999999
Q ss_pred eEEEEECCCCCCCCCeeEecccCCCeeEEEecCC--CCeEEEEEeCCCcEEEEECCCCCC-cceeecCCCCCEEEEEEcC
Q 014472 251 YLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPF--NEWILATGSTDKTVKLFDLRKIST-ALHTFDSHKEEVFQVGWNP 327 (424)
Q Consensus 251 ~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~~~--~~~~l~~g~~dg~i~iwd~~~~~~-~~~~~~~~~~~v~~~~~sp 327 (424)
+|++||++++.. ..+..+..|...|.+++|+|+ +. +|++|+.|+.|++||++.... ....+.+|...|.+++|+|
T Consensus 78 ~v~iWd~~~~~~-~~~~~~~~h~~~v~~v~~~p~~~g~-~l~s~s~d~~v~~wd~~~~~~~~~~~~~~h~~~v~~~~~~p 155 (297)
T 2pm7_B 78 KVMIWKEENGRW-SQIAVHAVHSASVNSVQWAPHEYGP-MLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAP 155 (297)
T ss_dssp EEEEEEBSSSCB-CCCEEECCCSSCEEEEEECCGGGCS-EEEEEETTSEEEEEEBCSSSCBCCEEEECCSSCEEEEEECC
T ss_pred EEEEEEcCCCce-EEEEEeecCCCceeEEEeCcCCCCc-EEEEEECCCcEEEEEecCCCceeeeeeecccCccceEeecC
Confidence 999999987642 345667789999999999997 55 799999999999999987422 2466788999999999999
Q ss_pred CC------------CcEEEEEeCCCeEEEeeCCCCCcccCCCccCCCCCeeeEEEcCCCCCcceEEeCCCC--CcEEEEE
Q 014472 328 KN------------ETILASCCLGRRLMVWDLSRIDEEQTPEDAEDGPPELLFIHGGHTSKISDFSWNPCE--DWVISSV 393 (424)
Q Consensus 328 ~~------------~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~--~~~l~s~ 393 (424)
++ ..+|++|+.|+.|+|||++.... ...+...+.+|...|.+++|+|++ ..+|+++
T Consensus 156 ~~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~----------~~~~~~~l~~H~~~V~~v~~sp~~~~~~~las~ 225 (297)
T 2pm7_B 156 ATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQ----------TYVLESTLEGHSDWVRDVAWSPTVLLRSYMASV 225 (297)
T ss_dssp CC------------CCEEEEEETTSCEEEEEEETTTT----------EEEEEEEECCCSSCEEEEEECCCCSSSEEEEEE
T ss_pred CcccccccCCCCCCcceEEEEcCCCcEEEEEEcCCCc----------eEEEEEEecCCCCceEEEEECCCCCCceEEEEE
Confidence 73 24899999999999999976431 113566788999999999999995 2379999
Q ss_pred eCCCcEEEEecCCC
Q 014472 394 AEDNILQIWQMAEN 407 (424)
Q Consensus 394 ~~d~~i~iw~~~~~ 407 (424)
+.|+.|+||++...
T Consensus 226 s~D~~v~iWd~~~~ 239 (297)
T 2pm7_B 226 SQDRTCIIWTQDNE 239 (297)
T ss_dssp ETTSCEEEEEESST
T ss_pred ECCCcEEEEEeCCC
Confidence 99999999999764
No 74
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=100.00 E-value=9.3e-34 Score=268.74 Aligned_cols=271 Identities=14% Similarity=0.214 Sum_probs=200.5
Q ss_pred eccCCceeEEEecC-CCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCCeeeEEecCCCCceEEEEeCC
Q 014472 122 INHDGEVNRARYMP-QNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDD 200 (424)
Q Consensus 122 ~~h~~~v~~i~~~p-~~~~~latg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~d 200 (424)
..|.+.|++++|+| ++. +||+|+.||.|+|||+...... ........+ +|...|.+++|+|++. +|++|+.|
T Consensus 60 ~~h~~~V~~~~~s~~~~~-~l~s~s~dg~v~vwd~~~~~~~----~~~~~~~~~-~h~~~v~~~~~~~~~~-~l~s~s~d 132 (437)
T 3gre_A 60 ENEPNSITSSAVSPGETP-YLITGSDQGVIKIWNLKEIIVG----EVYSSSLTY-DCSSTVTQITMIPNFD-AFAVSSKD 132 (437)
T ss_dssp TTTTSCEEEEEEECSSSC-EEEEEETTSEEEEEEHHHHHTT----CCCSCSEEE-ECSSCEEEEEECTTSS-EEEEEETT
T ss_pred cCCCCceEEEEECCCCCC-EEEEecCCceEEEeECcccccC----cccceeeec-cCCCCEEEEEEeCCCC-EEEEEeCC
Confidence 46899999999999 776 8999999999999998651110 012223333 5999999999999777 79999999
Q ss_pred CcEEEEeCC---CCCCCCcc--cceeeee--c--CCcceeeEE--eeCCCCcEEEEEeCCCeEEEEECCCCCCCCCeeEe
Q 014472 201 AQICLWDIN---AAPKNKSL--EAMQIFK--V--HEGVVEDVA--WHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSV 269 (424)
Q Consensus 201 g~i~vwd~~---~~~~~~~~--~~~~~~~--~--~~~~v~~i~--~~~~~~~~~~s~~~dg~i~i~d~~~~~~~~~~~~~ 269 (424)
|.|++||+. .+...... ..+..+. . +...+.++. +++++. ++++++.||.|++||+++++. +..+
T Consensus 133 g~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~~~d~~i~iwd~~~~~~---~~~~ 208 (437)
T 3gre_A 133 GQIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKS-LLVALTNLSRVIIFDIRTLER---LQII 208 (437)
T ss_dssp SEEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCE-EEEEEETTSEEEEEETTTCCE---EEEE
T ss_pred CEEEEEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCCC-EEEEEeCCCeEEEEeCCCCee---eEEE
Confidence 999999995 33211100 0111111 1 445566666 446664 677999999999999998664 6667
Q ss_pred cc--cCCCeeEEEecCCCCeEEEEEeCCCcEEEEECCCCCCcceeec-CCCCCEEEEEEcC----CCCcEEEEEeCCCeE
Q 014472 270 VA--HQSEVNCLAFNPFNEWILATGSTDKTVKLFDLRKISTALHTFD-SHKEEVFQVGWNP----KNETILASCCLGRRL 342 (424)
Q Consensus 270 ~~--~~~~v~~i~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~-~~~~~v~~~~~sp----~~~~~l~s~~~dg~i 342 (424)
.. |...|++++|+|++. +|++|+.||.|++||++. +.++..+. .|..+|.+++|+| ++ .+|++++.||.|
T Consensus 209 ~~~~h~~~v~~~~~s~~~~-~l~s~~~dg~i~iwd~~~-~~~~~~~~~~~~~~v~~~~~~~~~s~~~-~~l~s~~~dg~i 285 (437)
T 3gre_A 209 ENSPRHGAVSSICIDEECC-VLILGTTRGIIDIWDIRF-NVLIRSWSFGDHAPITHVEVCQFYGKNS-VIVVGGSSKTFL 285 (437)
T ss_dssp ECCGGGCCEEEEEECTTSC-EEEEEETTSCEEEEETTT-TEEEEEEBCTTCEEEEEEEECTTTCTTE-EEEEEESTTEEE
T ss_pred ccCCCCCceEEEEECCCCC-EEEEEcCCCeEEEEEcCC-ccEEEEEecCCCCceEEEEeccccCCCc-cEEEEEcCCCcE
Confidence 66 889999999999987 699999999999999998 77777775 7888999997775 44 489999999999
Q ss_pred EEeeCCCCCcccCCCccCCCCCeeeE----------EEcC--CCCCcceEEeCCCCCcEEEEEeCCCcEEEEecCCCC
Q 014472 343 MVWDLSRIDEEQTPEDAEDGPPELLF----------IHGG--HTSKISDFSWNPCEDWVISSVAEDNILQIWQMAENI 408 (424)
Q Consensus 343 ~iwd~~~~~~~~~~~~~~~~~~~~~~----------~~~~--h~~~v~~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~ 408 (424)
++||++++............+....+ .+.+ |...|++++|+ +++ +|++++.|+.|++|++.++.
T Consensus 286 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~-~~~-~l~s~~~d~~i~~wd~~~~~ 361 (437)
T 3gre_A 286 TIWNFVKGHCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTISVS-NDK-ILLTDEATSSIVMFSLNELS 361 (437)
T ss_dssp EEEETTTTEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEE-TTE-EEEEEGGGTEEEEEETTCGG
T ss_pred EEEEcCCCcEEEEEEcCCCCCccceecccccccccceecccccCCceEEEEEC-Cce-EEEecCCCCeEEEEECCCcc
Confidence 99999876533222111110000000 1233 77789999999 666 79999999999999998874
No 75
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.2e-32 Score=245.93 Aligned_cols=244 Identities=20% Similarity=0.227 Sum_probs=206.3
Q ss_pred EEeccCCceeEEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCCeeeEEecCCCCceEEEEeC
Q 014472 120 QQINHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSD 199 (424)
Q Consensus 120 ~~~~h~~~v~~i~~~p~~~~~latg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~ 199 (424)
...+|.+.|++++| |++. +||+|+.||.|++||+.. ......+..|...|.+++|+|++. +|++++.
T Consensus 13 ~l~~h~~~v~~~~~-~~~~-~l~s~~~dg~v~vw~~~~----------~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~ 79 (313)
T 3odt_A 13 TLKGHDQDVRDVVA-VDDS-KVASVSRDGTVRLWSKDD----------QWLGTVVYTGQGFLNSVCYDSEKE-LLLFGGK 79 (313)
T ss_dssp EECCCSSCEEEEEE-EETT-EEEEEETTSEEEEEEESS----------SEEEEEEEECSSCEEEEEEETTTT-EEEEEET
T ss_pred HhhCCCCCcEEEEe-cCCC-EEEEEEcCCcEEEEECCC----------CEEEEEeecCCccEEEEEECCCCC-EEEEecC
Confidence 34579999999999 8776 799999999999999976 455667788999999999999887 8999999
Q ss_pred CCcEEEEeCCCCCCCCcccceeeeecCCcceeeEEeeCCCCcEEEEEeCCCeEEEEECCCCCCCCCeeEecccCCCeeEE
Q 014472 200 DAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCL 279 (424)
Q Consensus 200 dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~i 279 (424)
||.|++|++...... .....+..|...|.+++|+ +. ++++++.||.|++|| . ...+..+..|...+.++
T Consensus 80 dg~i~~~~~~~~~~~---~~~~~~~~~~~~i~~~~~~--~~-~l~~~~~d~~i~~~d--~---~~~~~~~~~~~~~v~~~ 148 (313)
T 3odt_A 80 DTMINGVPLFATSGE---DPLYTLIGHQGNVCSLSFQ--DG-VVISGSWDKTAKVWK--E---GSLVYNLQAHNASVWDA 148 (313)
T ss_dssp TSCEEEEETTCCTTS---CC-CEECCCSSCEEEEEEE--TT-EEEEEETTSEEEEEE--T---TEEEEEEECCSSCEEEE
T ss_pred CCeEEEEEeeecCCC---CcccchhhcccCEEEEEec--CC-EEEEEeCCCCEEEEc--C---CcEEEecccCCCceeEE
Confidence 999999999875332 3345567899999999994 33 677999999999999 2 22466778899999999
Q ss_pred EecC-CCCeEEEEEeCCCcEEEEECCCCCCcceeecC-CCCCEEEEEEcCCCCcEEEEEeCCCeEEEeeCCCCCcccCCC
Q 014472 280 AFNP-FNEWILATGSTDKTVKLFDLRKISTALHTFDS-HKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPE 357 (424)
Q Consensus 280 ~~~~-~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~-~~~~v~~~~~sp~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~ 357 (424)
+|.| ++. +|++++.||.|++||. ......+.. |...|.+++|+|++. +++++.||.|++||++.+
T Consensus 149 ~~~~~~~~-~l~~~~~d~~i~i~d~---~~~~~~~~~~~~~~i~~~~~~~~~~--~~~~~~dg~i~i~d~~~~------- 215 (313)
T 3odt_A 149 KVVSFSEN-KFLTASADKTIKLWQN---DKVIKTFSGIHNDVVRHLAVVDDGH--FISCSNDGLIKLVDMHTG------- 215 (313)
T ss_dssp EEEETTTT-EEEEEETTSCEEEEET---TEEEEEECSSCSSCEEEEEEEETTE--EEEEETTSEEEEEETTTC-------
T ss_pred EEccCCCC-EEEEEECCCCEEEEec---CceEEEEeccCcccEEEEEEcCCCe--EEEccCCCeEEEEECCch-------
Confidence 9998 555 7999999999999993 355666666 899999999999985 889999999999999874
Q ss_pred ccCCCCCeeeEEEcCCCCCcceEEeCCCCCcEEEEEeCCCcEEEEecCCCCC
Q 014472 358 DAEDGPPELLFIHGGHTSKISDFSWNPCEDWVISSVAEDNILQIWQMAENIY 409 (424)
Q Consensus 358 ~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~ 409 (424)
+.+..+.+|...|++++|+|++. |++++.||.|++|++.++..
T Consensus 216 -------~~~~~~~~~~~~i~~~~~~~~~~--l~~~~~dg~v~iwd~~~~~~ 258 (313)
T 3odt_A 216 -------DVLRTYEGHESFVYCIKLLPNGD--IVSCGEDRTVRIWSKENGSL 258 (313)
T ss_dssp -------CEEEEEECCSSCEEEEEECTTSC--EEEEETTSEEEEECTTTCCE
T ss_pred -------hhhhhhhcCCceEEEEEEecCCC--EEEEecCCEEEEEECCCCce
Confidence 55777789999999999999994 77889999999999988743
No 76
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=100.00 E-value=1.1e-31 Score=245.73 Aligned_cols=285 Identities=12% Similarity=0.107 Sum_probs=223.4
Q ss_pred CccEEEEccCCCCCCCCCCceEEEEEeecCCCCCCCeEEEEEEEcCCCCCCcccCCCCCcCCCCCCCCCCCCcEEEEEEe
Q 014472 43 PSLTVEWLPDREEPPGKDYSVQKMILGTHTSENEPNYLMLAQVQLPLDDSENDARHYDDDRSDFGGFGCANGKVQIIQQI 122 (424)
Q Consensus 43 p~~~~~~~p~~~~~~~~~~~~~~~~~gt~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 122 (424)
+..++.|.|+. ..++.|+ .++.++++.+.-. ..........
T Consensus 13 ~v~~~~~s~~~----------~~l~~~~-----~d~~v~iw~~~~~------------------------~~~~~~~~~~ 53 (342)
T 1yfq_A 13 YISDIKIIPSK----------SLLLITS-----WDGSLTVYKFDIQ------------------------AKNVDLLQSL 53 (342)
T ss_dssp CEEEEEEEGGG----------TEEEEEE-----TTSEEEEEEEETT------------------------TTEEEEEEEE
T ss_pred cEEEEEEcCCC----------CEEEEEc-----CCCeEEEEEeCCC------------------------Cccccceeee
Confidence 36688899864 3566655 4467888887421 1123344556
Q ss_pred ccCCceeEEEecCCCCcEEEEEecCCeEEEEeC-CCCCCCCCCCCCCCCcEEEec--CCCCeeeEEecCCCCceEEEEeC
Q 014472 123 NHDGEVNRARYMPQNPFLIATKTVSAEVYVFDY-SKHPSKPPLDGACSPDLRLRG--HSTEGYGLSWSKFKEGHLLSGSD 199 (424)
Q Consensus 123 ~h~~~v~~i~~~p~~~~~latg~~dg~v~iwd~-~~~~~~~~~~~~~~~~~~~~~--h~~~v~~l~~~~~~~~~l~s~~~ 199 (424)
.|...|++++|+|++..+|++|+.||.|++|++ .. .....+.+ |...|.+++|+| +. +|++++.
T Consensus 54 ~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~wd~~~~-----------~~~~~~~~~~~~~~v~~l~~~~-~~-~l~s~~~ 120 (342)
T 1yfq_A 54 RYKHPLLCCNFIDNTDLQIYVGTVQGEILKVDLIGS-----------PSFQALTNNEANLGICRICKYG-DD-KLIAASW 120 (342)
T ss_dssp ECSSCEEEEEEEESSSEEEEEEETTSCEEEECSSSS-----------SSEEECBSCCCCSCEEEEEEET-TT-EEEEEET
T ss_pred ecCCceEEEEECCCCCcEEEEEcCCCeEEEEEeccC-----------CceEeccccCCCCceEEEEeCC-CC-EEEEEcC
Confidence 899999999999986427889999999999999 76 22467778 999999999999 65 8999999
Q ss_pred CCcEEEEeCCCCCCCC---cccceeeeecCCcceeeEEeeCCCCcEEEEEeCCCeEEEEECCC-CCCCCCeeEecccCCC
Q 014472 200 DAQICLWDINAAPKNK---SLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRT-PSVSKPVQSVVAHQSE 275 (424)
Q Consensus 200 dg~i~vwd~~~~~~~~---~~~~~~~~~~~~~~v~~i~~~~~~~~~~~s~~~dg~i~i~d~~~-~~~~~~~~~~~~~~~~ 275 (424)
||.|++||+++..... ...++..+. |...|.+++|+|++ +++++.|+.|++||++. ... ........|...
T Consensus 121 d~~i~iwd~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~---l~~~~~d~~i~i~d~~~~~~~-~~~~~~~~~~~~ 195 (342)
T 1yfq_A 121 DGLIEVIDPRNYGDGVIAVKNLNSNNTK-VKNKIFTMDTNSSR---LIVGMNNSQVQWFRLPLCEDD-NGTIEESGLKYQ 195 (342)
T ss_dssp TSEEEEECHHHHTTBCEEEEESCSSSSS-SCCCEEEEEECSSE---EEEEESTTEEEEEESSCCTTC-CCEEEECSCSSC
T ss_pred CCeEEEEcccccccccccccCCeeeEEe-eCCceEEEEecCCc---EEEEeCCCeEEEEECCccccc-cceeeecCCCCc
Confidence 9999999997510000 011223333 78899999999876 66899999999999998 542 223344568889
Q ss_pred eeEEEecC-CCCeEEEEEeCCCcEEEEECCCC-----CCcceeecCCCC---------CEEEEEEcCCCCcEEEEEeCCC
Q 014472 276 VNCLAFNP-FNEWILATGSTDKTVKLFDLRKI-----STALHTFDSHKE---------EVFQVGWNPKNETILASCCLGR 340 (424)
Q Consensus 276 v~~i~~~~-~~~~~l~~g~~dg~i~iwd~~~~-----~~~~~~~~~~~~---------~v~~~~~sp~~~~~l~s~~~dg 340 (424)
+.+++|+| ++. +|++|+.||.|++||++.. ..+...+..|.. .|.+++|+|++. +|++++.||
T Consensus 196 i~~i~~~~~~~~-~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~-~l~~~~~dg 273 (342)
T 1yfq_A 196 IRDVALLPKEQE-GYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHK-FLYTAGSDG 273 (342)
T ss_dssp EEEEEECSGGGC-EEEEEETTSEEEEEECCTTCCSTTCTTCEEEECCCCCTTCCSSCCCEEEEEECTTTC-CEEEEETTS
T ss_pred eeEEEECCCCCC-EEEEEecCCcEEEEEEcCCCcccccccceeeecccccccccccceeEEEEEEcCCCC-EEEEecCCc
Confidence 99999999 887 6999999999999999884 377788888765 999999999996 689999999
Q ss_pred eEEEeeCCCCCcccCCCccCCCCCeeeEEEcCC-CCCcceEEeCCCCCcEEEEEeCCCc-EEEEe
Q 014472 341 RLMVWDLSRIDEEQTPEDAEDGPPELLFIHGGH-TSKISDFSWNPCEDWVISSVAEDNI-LQIWQ 403 (424)
Q Consensus 341 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h-~~~v~~~~~~~~~~~~l~s~~~d~~-i~iw~ 403 (424)
.|++||+.++ +++..+.+| ...|++++ |++. +|++++.||. .+.|.
T Consensus 274 ~i~vwd~~~~--------------~~~~~~~~~h~~~v~~~~--~~~~-~l~s~s~Dg~~~~~~~ 321 (342)
T 1yfq_A 274 IISCWNLQTR--------------KKIKNFAKFNEDSVVKIA--CSDN-ILCLATSDDTFKTNAA 321 (342)
T ss_dssp CEEEEETTTT--------------EEEEECCCCSSSEEEEEE--ECSS-EEEEEEECTHHHHCSS
T ss_pred eEEEEcCccH--------------hHhhhhhcccCCCceEec--CCCC-eEEEEecCCccccccc
Confidence 9999999875 567778888 99999999 9999 7999999998 44443
No 77
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=100.00 E-value=5.3e-32 Score=258.65 Aligned_cols=247 Identities=20% Similarity=0.335 Sum_probs=208.2
Q ss_pred EEEeccCCce-eEEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCCeeeEEecCCCCceEEEE
Q 014472 119 IQQINHDGEV-NRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSG 197 (424)
Q Consensus 119 ~~~~~h~~~v-~~i~~~p~~~~~latg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~ 197 (424)
....+|.+.| .++.+. +. +|++|+.||.|++||+.+ ......+.+|.+.|.+++|+|++ +|++|
T Consensus 115 ~~l~~h~~~v~~~~~~~--~~-~l~sgs~dg~i~vwd~~~----------~~~~~~~~~h~~~V~~l~~~~~~--~l~s~ 179 (464)
T 3v7d_B 115 TTLRGHMTSVITCLQFE--DN-YVITGADDKMIRVYDSIN----------KKFLLQLSGHDGGVWALKYAHGG--ILVSG 179 (464)
T ss_dssp EEEECCSSSCEEEEEEE--TT-EEEEEETTSCEEEEETTT----------TEEEEEECCCSSCEEEEEECSTT--EEEEE
T ss_pred EEEcCCCCCcEEEEEEC--CC-EEEEEcCCCcEEEEECCC----------CcEEEEEeCCCcCEEEEEEcCCC--EEEEE
Confidence 3445788774 677774 33 899999999999999987 45677888999999999999866 79999
Q ss_pred eCCCcEEEEeCCCCCCCCcccceeeeecCCcceeeEEeeCC-CCcEEEEEeCCCeEEEEECCCCCCCCC-----------
Q 014472 198 SDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLR-HEYLFGSVGDDQYLLIWDLRTPSVSKP----------- 265 (424)
Q Consensus 198 ~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~-~~~~~~s~~~dg~i~i~d~~~~~~~~~----------- 265 (424)
+.||+|++||+.++ ..+..+.+|...|.+++|++. +..++++++.||.|++||+++......
T Consensus 180 s~dg~i~vwd~~~~------~~~~~~~~h~~~v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~ 253 (464)
T 3v7d_B 180 STDRTVRVWDIKKG------CCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVF 253 (464)
T ss_dssp ETTSCEEEEETTTT------EEEEEECCCSSCEEEEEEEESSSCEEEEEEETTSCEEEEECCCCCCC------CCSSEEE
T ss_pred eCCCCEEEEECCCC------cEEEEECCCCCccEEEEEecCCCCCEEEEEcCCCcEEEeeCCCCcccccccccCCcceEe
Confidence 99999999999876 356677889999999999952 235778999999999999987653211
Q ss_pred ---------eeEecccCCCeeEEEecCCCCeEEEEEeCCCcEEEEECCCCCCcceeecCCCCCEEEEEEcCCCCcEEEEE
Q 014472 266 ---------VQSVVAHQSEVNCLAFNPFNEWILATGSTDKTVKLFDLRKISTALHTFDSHKEEVFQVGWNPKNETILASC 336 (424)
Q Consensus 266 ---------~~~~~~~~~~v~~i~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~s~ 336 (424)
+..+.+|...+.++. +++. ++++|+.||.|++||+++ ..++..+.+|...|.+++|+|++. +|+++
T Consensus 254 ~~~~~~~~~~~~~~~~~~~v~~~~--~~~~-~l~~~~~d~~i~vwd~~~-~~~~~~~~~~~~~v~~~~~~~~~~-~l~sg 328 (464)
T 3v7d_B 254 HTPEENPYFVGVLRGHMASVRTVS--GHGN-IVVSGSYDNTLIVWDVAQ-MKCLYILSGHTDRIYSTIYDHERK-RCISA 328 (464)
T ss_dssp SCGGGCTTEEEEECCCSSCEEEEE--EETT-EEEEEETTSCEEEEETTT-TEEEEEECCCSSCEEEEEEETTTT-EEEEE
T ss_pred eccCCCeEEEEEccCccceEEEEc--CCCC-EEEEEeCCCeEEEEECCC-CcEEEEecCCCCCEEEEEEcCCCC-EEEEE
Confidence 445677888888885 4466 699999999999999998 788899999999999999999986 79999
Q ss_pred eCCCeEEEeeCCCCCcccCCCccCCCCCeeeEEEcCCCCCcceEEeCCCCCcEEEEEeCCCcEEEEecCCCC
Q 014472 337 CLGRRLMVWDLSRIDEEQTPEDAEDGPPELLFIHGGHTSKISDFSWNPCEDWVISSVAEDNILQIWQMAENI 408 (424)
Q Consensus 337 ~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~ 408 (424)
+.||.|++||++++ +++..+.+|...|.+++|++ . .|++++.||.|++||+.+..
T Consensus 329 ~~dg~i~vwd~~~~--------------~~~~~~~~h~~~v~~~~~~~--~-~l~s~s~dg~v~vwd~~~~~ 383 (464)
T 3v7d_B 329 SMDTTIRIWDLENG--------------ELMYTLQGHTALVGLLRLSD--K-FLVSAAADGSIRGWDANDYS 383 (464)
T ss_dssp ETTSCEEEEETTTT--------------EEEEEECCCSSCEEEEEECS--S-EEEEEETTSEEEEEETTTCC
T ss_pred eCCCcEEEEECCCC--------------cEEEEEeCCCCcEEEEEEcC--C-EEEEEeCCCcEEEEECCCCc
Confidence 99999999999874 66788899999999999984 4 79999999999999998753
No 78
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=100.00 E-value=1.3e-32 Score=251.80 Aligned_cols=253 Identities=12% Similarity=0.138 Sum_probs=202.4
Q ss_pred ccCCceeEEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCCeeeEEecCCCCceEEEEeCCCc
Q 014472 123 NHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDDAQ 202 (424)
Q Consensus 123 ~h~~~v~~i~~~p~~~~~latg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~ 202 (424)
.|.+.|++++|+|++. +|++|+.||.|+||++.... .......+.+|...|.+++|+|++..+|++|+.||.
T Consensus 9 ~h~~~v~~~~~s~~~~-~l~~~~~d~~v~iw~~~~~~-------~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~ 80 (342)
T 1yfq_A 9 APKDYISDIKIIPSKS-LLLITSWDGSLTVYKFDIQA-------KNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGE 80 (342)
T ss_dssp CCSSCEEEEEEEGGGT-EEEEEETTSEEEEEEEETTT-------TEEEEEEEEECSSCEEEEEEEESSSEEEEEEETTSC
T ss_pred CCCCcEEEEEEcCCCC-EEEEEcCCCeEEEEEeCCCC-------ccccceeeeecCCceEEEEECCCCCcEEEEEcCCCe
Confidence 6999999999999886 88999999999999998721 011245566899999999999976415999999999
Q ss_pred EEEEeC-CCCCCCCcccceeeeec--CCcceeeEEeeCCCCcEEEEEeCCCeEEEEECCC---------CCCCCCeeEec
Q 014472 203 ICLWDI-NAAPKNKSLEAMQIFKV--HEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRT---------PSVSKPVQSVV 270 (424)
Q Consensus 203 i~vwd~-~~~~~~~~~~~~~~~~~--~~~~v~~i~~~~~~~~~~~s~~~dg~i~i~d~~~---------~~~~~~~~~~~ 270 (424)
|++||+ ..+. ...+.+ |...|.+++|+| +. ++++++.|+.|++||+++ .+. +..+.
T Consensus 81 i~~wd~~~~~~-------~~~~~~~~~~~~v~~l~~~~-~~-~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~---~~~~~ 148 (342)
T 1yfq_A 81 ILKVDLIGSPS-------FQALTNNEANLGICRICKYG-DD-KLIAASWDGLIEVIDPRNYGDGVIAVKNLN---SNNTK 148 (342)
T ss_dssp EEEECSSSSSS-------EEECBSCCCCSCEEEEEEET-TT-EEEEEETTSEEEEECHHHHTTBCEEEEESC---SSSSS
T ss_pred EEEEEeccCCc-------eEeccccCCCCceEEEEeCC-CC-EEEEEcCCCeEEEEcccccccccccccCCe---eeEEe
Confidence 999999 7652 255667 999999999999 54 677999999999999987 543 33333
Q ss_pred ccCCCeeEEEecCCCCeEEEEEeCCCcEEEEECCC-CCCc-ceeecCCCCCEEEEEEcC-CCCcEEEEEeCCCeEEEeeC
Q 014472 271 AHQSEVNCLAFNPFNEWILATGSTDKTVKLFDLRK-ISTA-LHTFDSHKEEVFQVGWNP-KNETILASCCLGRRLMVWDL 347 (424)
Q Consensus 271 ~~~~~v~~i~~~~~~~~~l~~g~~dg~i~iwd~~~-~~~~-~~~~~~~~~~v~~~~~sp-~~~~~l~s~~~dg~i~iwd~ 347 (424)
|...|.+++|+|++ +++++.|+.|++||++. .... ......|...|.+++|+| ++. +|++++.||.|++|++
T Consensus 149 -~~~~v~~~~~~~~~---l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~-~l~~~~~dg~i~i~~~ 223 (342)
T 1yfq_A 149 -VKNKIFTMDTNSSR---LIVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQE-GYACSSIDGRVAVEFF 223 (342)
T ss_dssp -SCCCEEEEEECSSE---EEEEESTTEEEEEESSCCTTCCCEEEECSCSSCEEEEEECSGGGC-EEEEEETTSEEEEEEC
T ss_pred -eCCceEEEEecCCc---EEEEeCCCeEEEEECCccccccceeeecCCCCceeEEEECCCCCC-EEEEEecCCcEEEEEE
Confidence 88999999999865 88999999999999997 4432 334556888999999999 885 7999999999999999
Q ss_pred CCCCcccCCCccCCCCCeeeEEEcCCC---------CCcceEEeCCCCCcEEEEEeCCCcEEEEecCCCCC
Q 014472 348 SRIDEEQTPEDAEDGPPELLFIHGGHT---------SKISDFSWNPCEDWVISSVAEDNILQIWQMAENIY 409 (424)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~~~~~~~h~---------~~v~~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~ 409 (424)
+...... .......+.+|. ..|++++|+|+++ +|++++.||.|++||+.++..
T Consensus 224 ~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~-~l~~~~~dg~i~vwd~~~~~~ 285 (342)
T 1yfq_A 224 DDQGDDY--------NSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHK-FLYTAGSDGIISCWNLQTRKK 285 (342)
T ss_dssp CTTCCST--------TCTTCEEEECCCCCTTCCSSCCCEEEEEECTTTC-CEEEEETTSCEEEEETTTTEE
T ss_pred cCCCccc--------ccccceeeecccccccccccceeEEEEEEcCCCC-EEEEecCCceEEEEcCccHhH
Confidence 8751000 012344455554 4899999999999 589999999999999987643
No 79
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=100.00 E-value=7.8e-32 Score=256.04 Aligned_cols=319 Identities=18% Similarity=0.266 Sum_probs=220.0
Q ss_pred CccEEEEccCCCCCCCCCCceEEEEEeecCCCCCCCeEEEEEEEcCCCCCCcccCCCCCcCCCCCCCCCCCCcEEEE-EE
Q 014472 43 PSLTVEWLPDREEPPGKDYSVQKMILGTHTSENEPNYLMLAQVQLPLDDSENDARHYDDDRSDFGGFGCANGKVQII-QQ 121 (424)
Q Consensus 43 p~~~~~~~p~~~~~~~~~~~~~~~~~gt~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 121 (424)
+..+++|.|++ ..++.|+ .+..|+++.+.-...... ...+.+++. ..
T Consensus 30 ~V~~v~~s~~g----------~~la~g~-----~dg~v~iw~~~~~~~~~~-----------------~~~~~~~~~~~~ 77 (447)
T 3dw8_B 30 IISTVEFNHSG----------ELLATGD-----KGGRVVIFQQEQENKIQS-----------------HSRGEYNVYSTF 77 (447)
T ss_dssp SEEEEEECSSS----------SEEEEEE-----TTSEEEEEEECC-----C-----------------CCCCCEEEEEEE
T ss_pred cEEEEEECCCC----------CEEEEEc-----CCCeEEEEEecCCCCCCc-----------------ccccceeEeccc
Confidence 45688999875 4566665 456788888742210000 011223322 23
Q ss_pred eccC------------CceeEEEecCCCC-cEEEEEecCCeEEEEeCCCCCCCC------C---------CCCCC-----
Q 014472 122 INHD------------GEVNRARYMPQNP-FLIATKTVSAEVYVFDYSKHPSKP------P---------LDGAC----- 168 (424)
Q Consensus 122 ~~h~------------~~v~~i~~~p~~~-~~latg~~dg~v~iwd~~~~~~~~------~---------~~~~~----- 168 (424)
.+|. +.|++++|+|++. .+|++++.||.|++|++....... . .....
T Consensus 78 ~~h~~~~~~~~~~~~~~~V~~l~~~~~~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 157 (447)
T 3dw8_B 78 QSHEPEFDYLKSLEIEEKINKIRWLPQKNAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVF 157 (447)
T ss_dssp ECCCCEEEGGGTEEECCCCCEEEECCCCSSSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEE
T ss_pred ccccccccccccccccCceEEEEEcCCCCcceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccc
Confidence 3687 8899999999873 378899999999999986511100 0 00000
Q ss_pred ---------CCcEE-EecCCCCeeeEEecCCCCceEEEEeCCCcEEEEeCCCCCCCCccccee-------eeecCCccee
Q 014472 169 ---------SPDLR-LRGHSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQ-------IFKVHEGVVE 231 (424)
Q Consensus 169 ---------~~~~~-~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~-------~~~~~~~~v~ 231 (424)
.+... ..+|...|.+++|+|++. +|++| .||.|++||++.... ... .+.+|...|+
T Consensus 158 ~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~-~l~s~-~d~~i~iwd~~~~~~-----~~~~~~~~~~~~~~~~~~v~ 230 (447)
T 3dw8_B 158 RPMDLMVEASPRRIFANAHTYHINSISINSDYE-TYLSA-DDLRINLWHLEITDR-----SFNIVDIKPANMEELTEVIT 230 (447)
T ss_dssp EEEEEEEEEEEEEEECSCCSSCCCEEEECTTSS-EEEEE-CSSEEEEEETTEEEE-----EEEEEECCCSSGGGCCCCEE
T ss_pred cchheeeeccceEEeccCCCcceEEEEEcCCCC-EEEEe-CCCeEEEEECCCCCc-----eeeeeecccccccccCcceE
Confidence 00112 357999999999999887 78888 799999999974311 111 3567999999
Q ss_pred eEEeeCCCCcEEEEEeCCCeEEEEECCCCCC-CCCeeEecccCC------------CeeEEEecCCCCeEEEEEeCCCcE
Q 014472 232 DVAWHLRHEYLFGSVGDDQYLLIWDLRTPSV-SKPVQSVVAHQS------------EVNCLAFNPFNEWILATGSTDKTV 298 (424)
Q Consensus 232 ~i~~~~~~~~~~~s~~~dg~i~i~d~~~~~~-~~~~~~~~~~~~------------~v~~i~~~~~~~~~l~~g~~dg~i 298 (424)
+++|+|++..+|++|+.||.|++||++++.. ...+..+..|.. .|.+++|+|++. +|++++. +.|
T Consensus 231 ~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~-~l~~~~~-~~v 308 (447)
T 3dw8_B 231 AAEFHPNSCNTFVYSSSKGTIRLCDMRASALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGR-YMMTRDY-LSV 308 (447)
T ss_dssp EEEECSSCTTEEEEEETTSCEEEEETTTCSSSCTTCEEECCC-----CCHHHHHTTCEEEEEECTTSS-EEEEEES-SEE
T ss_pred EEEECCCCCcEEEEEeCCCeEEEEECcCCccccceeeEeccCCCccccccccccCceEEEEEECCCCC-EEEEeeC-CeE
Confidence 9999999856788999999999999998763 223566667765 899999999998 5888888 999
Q ss_pred EEEECCCCCCcceeecCCCCC---------------EEEEEEcCCCCcEEEEEeCCCeEEEeeCCCCCcccCCCccC---
Q 014472 299 KLFDLRKISTALHTFDSHKEE---------------VFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPEDAE--- 360 (424)
Q Consensus 299 ~iwd~~~~~~~~~~~~~~~~~---------------v~~~~~sp~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~--- 360 (424)
++||++..+.++..+..|... +..++|+|+++ +|++++.||.|++||+..+..........
T Consensus 309 ~iwd~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~s~~~~-~l~s~s~dg~v~iwd~~~~~~~~~~~~~~~~~ 387 (447)
T 3dw8_B 309 KVWDLNMENRPVETYQVHEYLRSKLCSLYENDCIFDKFECCWNGSDS-VVMTGSYNNFFRMFDRNTKRDITLEASRENNK 387 (447)
T ss_dssp EEEETTCCSSCSCCEESCGGGTTTHHHHHHTSGGGCCCCEEECTTSS-EEEEECSTTEEEEEETTTCCEEEEECCSTTCC
T ss_pred EEEeCCCCccccceeeccccccccccccccccccccceEEEECCCCC-EEEEeccCCEEEEEEcCCCcceeeeecccccc
Confidence 999999767788888887642 33499999996 68999999999999998765321000000
Q ss_pred ---CCCC------------eeeEEEcCCCCCcceEEeCCCCCcEEEEEeCCCcEEEEecC
Q 014472 361 ---DGPP------------ELLFIHGGHTSKISDFSWNPCEDWVISSVAEDNILQIWQMA 405 (424)
Q Consensus 361 ---~~~~------------~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iw~~~ 405 (424)
..++ ........+...|..++|+|+++ +||+++.++ +++|.-.
T Consensus 388 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~-~la~~~~~~-~~~~~~~ 445 (447)
T 3dw8_B 388 PRTVLKPRKVCASGKRKKDEISVDSLDFNKKILHTAWHPKEN-IIAVATTNN-LYIFQDK 445 (447)
T ss_dssp TTCBCCCCCEECSSCCCTTCEEGGGCCTTSCCCEEEECSSSS-EEEEECSSC-EEEEECC
T ss_pred cccccCCccccccCCcccccccccccccCCceeEEEECCCCC-EEEEEecce-eeeeccc
Confidence 0000 00000113456789999999999 688887665 8888654
No 80
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=100.00 E-value=2.2e-31 Score=241.03 Aligned_cols=253 Identities=22% Similarity=0.410 Sum_probs=207.7
Q ss_pred EEEEEeccCCceeEEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCCeeeEEecCCCCceEEE
Q 014472 117 QIIQQINHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLS 196 (424)
Q Consensus 117 ~~~~~~~h~~~v~~i~~~p~~~~~latg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s 196 (424)
+.+..-.|...|++++|+|+++ +||+|+.||.|++|++.+ .+....+.+|...+.++.+.+ . ++++
T Consensus 59 ~~~~~~~~~~~V~~v~~~~~~~-~l~sgs~Dg~v~iw~~~~----------~~~~~~~~~h~~~~~~~~~~~--~-~l~s 124 (318)
T 4ggc_A 59 QLLQMEQPGEYISSVAWIKEGN-YLAVGTSSAEVQLWDVQQ----------QKRLRNMTSHSARVGSLSWNS--Y-ILSS 124 (318)
T ss_dssp EEEECCSTTCCEEEEEECTTSS-EEEEEETTSEEEEEETTT----------TEEEEEEECCSSCEEEEEEET--T-EEEE
T ss_pred EEEEecCCCCeEEEEEECCCCC-EEEEEECCCcEEEeecCC----------ceeEEEecCccceEEEeecCC--C-EEEE
Confidence 3344456889999999999987 899999999999999987 466778889999888777653 4 7999
Q ss_pred EeCCCcEEEEeCCCCCCCCcccceeeeecCCcceeeEEeeCCCCcEEEEEeCCCeEEEEECCCCCCC-CCeeEecccCCC
Q 014472 197 GSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVS-KPVQSVVAHQSE 275 (424)
Q Consensus 197 ~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~~s~~~dg~i~i~d~~~~~~~-~~~~~~~~~~~~ 275 (424)
++.++.+++|+..... ..+..+.+|...+..+.+++++. ++++++.||.|++||+++++.. ........+...
T Consensus 125 ~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~-~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~ 198 (318)
T 4ggc_A 125 GSRSGHIHHHDVRVAE-----HHVATLSGHSQEVCGLRWAPDGR-HLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGA 198 (318)
T ss_dssp EETTSEEEEEETTSSS-----CEEEEEECCSSCEEEEEECTTSS-EEEEEETTSCEEEEESSCBTTBSCCSEEECCCCSC
T ss_pred EecCCceEeeecCCCc-----eeEEEEcCccCceEEEEEcCCCC-EEEEEecCcceeEEECCCCcccccceeeecccCCc
Confidence 9999999999987653 24566778999999999999987 5679999999999999986532 234455678889
Q ss_pred eeEEEecCCCCeEEE--EEeCCCcEEEEECCCCCCcceeecCCCCCEEEEEEcCCCCcEEEE-EeCCCeEEEeeCCCCCc
Q 014472 276 VNCLAFNPFNEWILA--TGSTDKTVKLFDLRKISTALHTFDSHKEEVFQVGWNPKNETILAS-CCLGRRLMVWDLSRIDE 352 (424)
Q Consensus 276 v~~i~~~~~~~~~l~--~g~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~s-~~~dg~i~iwd~~~~~~ 352 (424)
|.+++++|.+..++. +++.++.|++||.+. .... ....+...+..+.|+|.+..++++ ++.|+.|+|||++++
T Consensus 199 v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~~-~~~~-~~~~~~~~v~~~~~~~~~~~~~~~sg~~d~~i~iwd~~~~-- 274 (318)
T 4ggc_A 199 VKAVAWCPWQSNVLATGGGTSDRHIRIWNVCS-GACL-SAVDAHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTM-- 274 (318)
T ss_dssp EEEEEECTTSTTEEEEEECTTTCEEEEEETTT-CCEE-EEEECSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTC--
T ss_pred eEEEEecCCCCcEEEEEecCCCCEEEEEeccc-cccc-ccccceeeeeeeeecccccceEEEEEcCCCEEEEEECCCC--
Confidence 999999998876654 556789999999987 3333 344567889999999999754443 347999999999875
Q ss_pred ccCCCccCCCCCeeeEEEcCCCCCcceEEeCCCCCcEEEEEeCCCcEEEEecCC
Q 014472 353 EQTPEDAEDGPPELLFIHGGHTSKISDFSWNPCEDWVISSVAEDNILQIWQMAE 406 (424)
Q Consensus 353 ~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iw~~~~ 406 (424)
+++..+.+|...|++++|+|+++ +|+|+|.||+|+|||+.+
T Consensus 275 ------------~~~~~l~gH~~~V~~l~~spdg~-~l~S~s~D~~v~iWd~~~ 315 (318)
T 4ggc_A 275 ------------AKVAELKGHTSRVLSLTMSPDGA-TVASAAADETLRLWRCFE 315 (318)
T ss_dssp ------------CEEEEECCCSSCEEEEEECTTSS-CEEEEETTTEEEEECCSC
T ss_pred ------------cEEEEEcCCCCCEEEEEEcCCCC-EEEEEecCCeEEEEECCC
Confidence 56788899999999999999999 699999999999999865
No 81
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=100.00 E-value=1.8e-32 Score=253.11 Aligned_cols=248 Identities=15% Similarity=0.232 Sum_probs=196.9
Q ss_pred eccCCceeEEEecCCC--CcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCCeeeEEecCCCCceEEEEeC
Q 014472 122 INHDGEVNRARYMPQN--PFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSD 199 (424)
Q Consensus 122 ~~h~~~v~~i~~~p~~--~~~latg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~ 199 (424)
..|.+.|++++|+|++ ..+||+|+.||.|+||++.. ........+.+|...|.+++|+|++. +|++++.
T Consensus 36 ~~h~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~--------~~~~~~~~~~~h~~~v~~~~~~~~~~-~l~s~~~ 106 (368)
T 3mmy_A 36 SSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQD--------SGQTIPKAQQMHTGPVLDVCWSDDGS-KVFTASC 106 (368)
T ss_dssp SCCSSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECT--------TSCEEEEEEEECSSCEEEEEECTTSS-EEEEEET
T ss_pred cCCCCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCC--------CCceeEEEeccccCCEEEEEECcCCC-EEEEEcC
Confidence 4799999999999985 45899999999999999986 11233367888999999999999887 7999999
Q ss_pred CCcEEEEeCCCCCCCCcccceeeeecCCcceeeEEe--eCCCCcEEEEEeCCCeEEEEECCCCCCCCCeeEeccc-----
Q 014472 200 DAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAW--HLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAH----- 272 (424)
Q Consensus 200 dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~i~~--~~~~~~~~~s~~~dg~i~i~d~~~~~~~~~~~~~~~~----- 272 (424)
||.|++||+.++. ......|...|.+++| +|++. +|++++.||.|++||+++++. +..+..+
T Consensus 107 dg~v~iwd~~~~~-------~~~~~~~~~~v~~~~~~~~~~~~-~l~~~~~dg~i~vwd~~~~~~---~~~~~~~~~~~~ 175 (368)
T 3mmy_A 107 DKTAKMWDLSSNQ-------AIQIAQHDAPVKTIHWIKAPNYS-CVMTGSWDKTLKFWDTRSSNP---MMVLQLPERCYC 175 (368)
T ss_dssp TSEEEEEETTTTE-------EEEEEECSSCEEEEEEEECSSCE-EEEEEETTSEEEEECSSCSSC---SEEEECSSCEEE
T ss_pred CCcEEEEEcCCCC-------ceeeccccCceEEEEEEeCCCCC-EEEEccCCCcEEEEECCCCcE---EEEEecCCCceE
Confidence 9999999998762 2235569999999999 77765 667999999999999998654 3333222
Q ss_pred ------------------------------------CCCeeEEEecCCCC---eEEEEEeCCCcEEEEECCCCC--Ccce
Q 014472 273 ------------------------------------QSEVNCLAFNPFNE---WILATGSTDKTVKLFDLRKIS--TALH 311 (424)
Q Consensus 273 ------------------------------------~~~v~~i~~~~~~~---~~l~~g~~dg~i~iwd~~~~~--~~~~ 311 (424)
...+.++++.+... ..+++|+.||.|++||++... ..+.
T Consensus 176 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~i~~~~~~~~~~~~~ 255 (368)
T 3mmy_A 176 ADVIYPMAVVATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYINPPNPAKDNF 255 (368)
T ss_dssp EEEETTEEEEEEGGGCEEEEECSSSCEEEEECCCSCSSCEEEEEEEECTTSCEEEEEEEETTSEEEEEESSCSCHHHHSE
T ss_pred EEecCCeeEEEeCCCcEEEEEeccccchhhhccccccCCCceEEEcccCCCCCCeEEEecCCCcEEEEecCCCCccccce
Confidence 12334444433222 238999999999999998732 4566
Q ss_pred eecCCCC------------CEEEEEEcCCCCcEEEEEeCCCeEEEeeCCCCCcccCCCccCCCCCeeeEEEcCCCCCcce
Q 014472 312 TFDSHKE------------EVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPEDAEDGPPELLFIHGGHTSKISD 379 (424)
Q Consensus 312 ~~~~~~~------------~v~~~~~sp~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~ 379 (424)
.+..|.. .|++++|+|++. +|++++.||.|++||+.++ .++..+.+|...|++
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~-~l~s~~~dg~i~iwd~~~~--------------~~~~~~~~~~~~v~~ 320 (368)
T 3mmy_A 256 TFKCHRSNGTNTSAPQDIYAVNGIAFHPVHG-TLATVGSDGRFSFWDKDAR--------------TKLKTSEQLDQPISA 320 (368)
T ss_dssp EEECSEEC----CCCEEECCEEEEEECTTTC-CEEEEETTSCEEEEETTTT--------------EEEEECCCCSSCEEE
T ss_pred eeeeeecccccccccccccceEEEEEecCCC-EEEEEccCCeEEEEECCCC--------------cEEEEecCCCCCceE
Confidence 7777766 799999999996 6999999999999999874 667788899999999
Q ss_pred EEeCCCCCcEEEEEeCCCcEEEEecC
Q 014472 380 FSWNPCEDWVISSVAEDNILQIWQMA 405 (424)
Q Consensus 380 ~~~~~~~~~~l~s~~~d~~i~iw~~~ 405 (424)
++|+|+++ +|++++.|+..+.|++-
T Consensus 321 ~~~s~~g~-~l~~~s~d~~~~~~~~~ 345 (368)
T 3mmy_A 321 CCFNHNGN-IFAYASSYDWSKGHEFY 345 (368)
T ss_dssp EEECTTSS-CEEEEECCCSTTCGGGC
T ss_pred EEECCCCC-eEEEEeccccccccccc
Confidence 99999999 58888888766555543
No 82
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=100.00 E-value=1.7e-31 Score=272.68 Aligned_cols=250 Identities=19% Similarity=0.260 Sum_probs=213.1
Q ss_pred EeccCCceeEEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCCeeeEEecCCCCceEEEEeCC
Q 014472 121 QINHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDD 200 (424)
Q Consensus 121 ~~~h~~~v~~i~~~p~~~~~latg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~d 200 (424)
...|.+.|.+++|+|++. +||+|+.||.|+||++.+ ......+.+|...|.+++|+|++. +|++++.|
T Consensus 51 ~~~~~~~v~~~~~s~~~~-~l~~~~~dg~i~vw~~~~----------~~~~~~~~~~~~~v~~~~~s~~~~-~l~~~~~d 118 (814)
T 3mkq_A 51 IQVTETPVRAGKFIARKN-WIIVGSDDFRIRVFNYNT----------GEKVVDFEAHPDYIRSIAVHPTKP-YVLSGSDD 118 (814)
T ss_dssp EECCSSCEEEEEEEGGGT-EEEEEETTSEEEEEETTT----------CCEEEEEECCSSCEEEEEECSSSS-EEEEEETT
T ss_pred EecCCCcEEEEEEeCCCC-EEEEEeCCCeEEEEECCC----------CcEEEEEecCCCCEEEEEEeCCCC-EEEEEcCC
Confidence 346999999999999887 899999999999999987 456778889999999999999988 79999999
Q ss_pred CcEEEEeCCCCCCCCcccceeeeecCCcceeeEEeeCCCCcEEEEEeCCCeEEEEECCCCCCCCCeeEecc-cCCCeeEE
Q 014472 201 AQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVA-HQSEVNCL 279 (424)
Q Consensus 201 g~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~~s~~~dg~i~i~d~~~~~~~~~~~~~~~-~~~~v~~i 279 (424)
|.|++||+.++. .....+.+|...|.+++|+|.+...+++++.||.|++||++.+.. ...+.. +...+.++
T Consensus 119 g~i~vw~~~~~~-----~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~v~vwd~~~~~~---~~~~~~~~~~~v~~~ 190 (814)
T 3mkq_A 119 LTVKLWNWENNW-----ALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTP---NFTLTTGQERGVNYV 190 (814)
T ss_dssp SEEEEEEGGGTS-----EEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCSSC---SEEEECCCTTCCCEE
T ss_pred CEEEEEECCCCc-----eEEEEEcCCCCcEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcc---eeEEecCCCCCEEEE
Confidence 999999997542 245567789999999999994445778999999999999987654 444444 44899999
Q ss_pred EecC--CCCeEEEEEeCCCcEEEEECCCCCCcceeecCCCCCEEEEEEcCCCCcEEEEEeCCCeEEEeeCCCCCcccCCC
Q 014472 280 AFNP--FNEWILATGSTDKTVKLFDLRKISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPE 357 (424)
Q Consensus 280 ~~~~--~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~ 357 (424)
+|+| ++. +|++|+.||.|++||+++ +.++..+..|...|.+++|+|+++ +|++++.||.|++||+.++
T Consensus 191 ~~~~~~~~~-~l~~~~~dg~i~~~d~~~-~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~dg~v~vwd~~~~------- 260 (814)
T 3mkq_A 191 DYYPLPDKP-YMITASDDLTIKIWDYQT-KSCVATLEGHMSNVSFAVFHPTLP-IIISGSEDGTLKIWNSSTY------- 260 (814)
T ss_dssp EECCSTTCC-EEEEECTTSEEEEEETTT-TEEEEEEECCSSCEEEEEECSSSS-EEEEEETTSCEEEEETTTC-------
T ss_pred EEEECCCCC-EEEEEeCCCEEEEEECCC-CcEEEEEcCCCCCEEEEEEcCCCC-EEEEEeCCCeEEEEECCCC-------
Confidence 9999 777 699999999999999998 678888999999999999999996 7999999999999999875
Q ss_pred ccCCCCCeeeEEEcCCCCCcceEEeCCCCCcEEEEEeCCCcEEEEecCCC
Q 014472 358 DAEDGPPELLFIHGGHTSKISDFSWNPCEDWVISSVAEDNILQIWQMAEN 407 (424)
Q Consensus 358 ~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iw~~~~~ 407 (424)
..+..+..|...+.+++|+|++..++++++.++.+.+|++..+
T Consensus 261 -------~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (814)
T 3mkq_A 261 -------KVEKTLNVGLERSWCIATHPTGRKNYIASGFDNGFTVLSLGND 303 (814)
T ss_dssp -------SEEEEECCSSSSEEEEEECTTCGGGEEEEEETTEEEEEECSCC
T ss_pred -------cEEEEeecCCCcEEEEEEccCCCceEEEEEeCCCEEEEEcCCC
Confidence 5567778888899999999998765444555777999998654
No 83
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=100.00 E-value=2.4e-32 Score=247.53 Aligned_cols=255 Identities=19% Similarity=0.241 Sum_probs=196.6
Q ss_pred CccEEEEccCCCCCCCCCCceEEEEEeecCCCCCCCeEEEEEEEcCCCCCCcccCCCCCcCCCCCCCCCCCCcEEEEEEe
Q 014472 43 PSLTVEWLPDREEPPGKDYSVQKMILGTHTSENEPNYLMLAQVQLPLDDSENDARHYDDDRSDFGGFGCANGKVQIIQQI 122 (424)
Q Consensus 43 p~~~~~~~p~~~~~~~~~~~~~~~~~gt~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 122 (424)
+..+++|.|+. .+++.|+ .+..++++.+.-. ....+....
T Consensus 15 ~V~~v~~s~~g----------~~lasgs-----~D~~v~lwd~~~~-------------------------~~~~~~~l~ 54 (316)
T 3bg1_A 15 MIHDAQMDYYG----------TRLATCS-----SDRSVKIFDVRNG-------------------------GQILIADLR 54 (316)
T ss_dssp CEEEEEECGGG----------CEEEEEE-----TTTEEEEEEEETT-------------------------EEEEEEEEE
T ss_pred eEEEeeEcCCC----------CEEEEEe-----CCCeEEEEEecCC-------------------------CcEEEEEEc
Confidence 46788998875 4566555 5578899887411 011223345
Q ss_pred ccCCceeEEEecCC-CCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCCeeeEEecCCC-CceEEEEeCC
Q 014472 123 NHDGEVNRARYMPQ-NPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFK-EGHLLSGSDD 200 (424)
Q Consensus 123 ~h~~~v~~i~~~p~-~~~~latg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~-~~~l~s~~~d 200 (424)
+|.+.|++++|+|+ ...+||+|+.|++|+|||+.. +.......+.+|...|.+++|+|++ ..+|++|+.|
T Consensus 55 gH~~~V~~v~~~~~~~~~~l~s~s~D~~v~iWd~~~--------~~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D 126 (316)
T 3bg1_A 55 GHEGPVWQVAWAHPMYGNILASCSYDRKVIIWREEN--------GTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSD 126 (316)
T ss_dssp CCSSCEEEEEECCGGGSSCEEEEETTSCEEEECCSS--------SCCCEEEEECCCSSCCCEEEECCTTTCSCEEEECSS
T ss_pred CCCccEEEEEeCCCCCCCEEEEEECCCEEEEEECCC--------CcceEEEEccCCCCceEEEEECCCCCCcEEEEEcCC
Confidence 79999999999863 234899999999999999976 2234556778899999999999973 2379999999
Q ss_pred CcEEEEeCCCCCCCCcccceeeeecCCcceeeEEeeCCC----------------CcEEEEEeCCCeEEEEECCCCCCCC
Q 014472 201 AQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRH----------------EYLFGSVGDDQYLLIWDLRTPSVSK 264 (424)
Q Consensus 201 g~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~----------------~~~~~s~~~dg~i~i~d~~~~~~~~ 264 (424)
|.|++||++.... ......+.+|...|.+++|+|+. ..+|++|+.|+.|++||++......
T Consensus 127 ~~i~lwd~~~~~~---~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~ 203 (316)
T 3bg1_A 127 GAISLLTYTGEGQ---WEVKKINNAHTIGCNAVSWAPAVVPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWK 203 (316)
T ss_dssp SCEEEEEECSSSC---EEECCBTTSSSSCBCCCEECCCCCC------CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEE
T ss_pred CCEEEEecCCCCC---cceeeeeccccCCcceEEEccccCCccccccccccCccccceEEEecCCCeEEEEEeCCCCccc
Confidence 9999999976421 12234456799999999999973 1367899999999999997543223
Q ss_pred CeeEecccCCCeeEEEecCCC---CeEEEEEeCCCcEEEEECCCCC---CcceeecCCCCCEEEEEEcCCCCcEEEEEeC
Q 014472 265 PVQSVVAHQSEVNCLAFNPFN---EWILATGSTDKTVKLFDLRKIS---TALHTFDSHKEEVFQVGWNPKNETILASCCL 338 (424)
Q Consensus 265 ~~~~~~~~~~~v~~i~~~~~~---~~~l~~g~~dg~i~iwd~~~~~---~~~~~~~~~~~~v~~~~~sp~~~~~l~s~~~ 338 (424)
.+..+.+|...|++++|+|++ ..+||+|+.||+|++||++... .....+..|...|.+++|+|++. +|++++.
T Consensus 204 ~~~~l~~h~~~V~~v~~sp~~~~~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~~v~~v~~sp~g~-~las~~~ 282 (316)
T 3bg1_A 204 EEQKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRVFIWTCDDASSNTWSPKLLHKFNDVVWHVSWSITAN-ILAVSGG 282 (316)
T ss_dssp EEECCBCCSSCEEEEECCCCSSCSCCEEEEEETTCEEEEEECSSTTCCCCBCCEEEECSSCEEEEEECTTTC-CEEEEES
T ss_pred eeeecccCCCceEEEEecCCCCCCCceEEEEcCCCeEEEEEccCccccchhhhhhhcCCCcEEEEEEcCCCC-EEEEEcC
Confidence 456678899999999999986 2479999999999999997621 12345567889999999999996 6999999
Q ss_pred CCeEEEeeCCC
Q 014472 339 GRRLMVWDLSR 349 (424)
Q Consensus 339 dg~i~iwd~~~ 349 (424)
|+.|+||+...
T Consensus 283 D~~v~lw~~~~ 293 (316)
T 3bg1_A 283 DNKVTLWKESV 293 (316)
T ss_dssp SSCEEEEEECT
T ss_pred CCeEEEEEECC
Confidence 99999999764
No 84
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=100.00 E-value=1.9e-32 Score=255.89 Aligned_cols=238 Identities=9% Similarity=0.018 Sum_probs=167.3
Q ss_pred CcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCCeeeEEecC--------CCCceEEEEeCCCcEEEEeCC
Q 014472 138 PFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSK--------FKEGHLLSGSDDAQICLWDIN 209 (424)
Q Consensus 138 ~~~latg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~--------~~~~~l~s~~~dg~i~vwd~~ 209 (424)
..+||+|+.|++|+|||....... .......+.+|.+.|.+|+|+| ++. +|++|+.|++|+|||+.
T Consensus 101 ~~~las~~~d~~v~lw~~~~~~~~-----~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~-~las~s~D~tv~~Wd~~ 174 (393)
T 4gq1_A 101 SLFLACVCQDNTVRLIITKNETII-----TQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQ-VIASVGDDCTLIIWRLT 174 (393)
T ss_dssp EEEEEEEETTSCEEEEEEETTEEE-----EEEEECTTTSCSSCEEEEEEEEEECTTCSEEEE-EEEEEETTSEEEEEEEE
T ss_pred CCEEEEEeCCCcEEEEECCCCccc-----eeeeecccCCCCCceEEEEEccccccccCCCCC-EEEEEECCCeEEEEECC
Confidence 358999999999999998861100 0011223568999999999997 454 89999999999999997
Q ss_pred CCCCCCcccceeeeecCCcceeeEEeeCCCCcEEEEEeCCCeEEEEECCCCCCCCCe----------------------e
Q 014472 210 AAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPV----------------------Q 267 (424)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~~s~~~dg~i~i~d~~~~~~~~~~----------------------~ 267 (424)
++ .....+..|...+.+++|+|++..+|++++.||+|++||++++...... .
T Consensus 175 ~~------~~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~ 248 (393)
T 4gq1_A 175 DE------GPILAGYPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPLVNTC 248 (393)
T ss_dssp TT------EEEEEEEECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC----------CSCCCSEEEESGGGC---
T ss_pred CC------ceeeeecCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCCcccceEEecccccceeee
Confidence 65 2445566789999999999998878899999999999999876532111 1
Q ss_pred EecccCCCeeEEEec-CCCCeEEEEEeCCCcEEEEECCCCCCcceeecCCCCCEEEEE------------------EcC-
Q 014472 268 SVVAHQSEVNCLAFN-PFNEWILATGSTDKTVKLFDLRKISTALHTFDSHKEEVFQVG------------------WNP- 327 (424)
Q Consensus 268 ~~~~~~~~v~~i~~~-~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~------------------~sp- 327 (424)
...+|...+.++.|. |++. .|++++.|+++++||++. +.....+..|...+..+. |+|
T Consensus 249 ~~~~~~~~v~~v~~~~~dg~-~l~s~s~d~~i~vwd~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (393)
T 4gq1_A 249 HSSGIASSLANVRWIGSDGS-GILAMCKSGAWLRWNLFA-NNDYNEISDSTMKLGPKNLLPNVQGISLFPSLLGACPHPR 326 (393)
T ss_dssp ---CCSSSCSEEEEETTTTC-EEEEECTTSEEEEEEC--------------------CCSCSEEEECSSCCSSCCEECSS
T ss_pred ecccccccceeeeeecCCCC-EEEEEeCCCCEEEEECcc-CCCCceEeeecCccccEEEccccccccccCcceeEEEccC
Confidence 124577889999987 6776 699999999999999986 444444444443333332 333
Q ss_pred CCCcEEEEEeCCCeEEEeeCCCCCcccCCCccCCCCCeeeEEEcCCCCCcceEEeCCCCCcEEEEEeCCCcEEEEecC
Q 014472 328 KNETILASCCLGRRLMVWDLSRIDEEQTPEDAEDGPPELLFIHGGHTSKISDFSWNPCEDWVISSVAEDNILQIWQMA 405 (424)
Q Consensus 328 ~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iw~~~ 405 (424)
.+..++++|+.||.|+|||+..+. ......+|..+|++++|+|+|+ +||+++.+| +.+|++.
T Consensus 327 ~~~~~~~sgs~Dg~V~lwd~~~~~--------------~~~~~~~~~~~V~svafspdG~-~LA~as~~G-v~lvrL~ 388 (393)
T 4gq1_A 327 YMDYFATAHSQHGLIQLINTYEKD--------------SNSIPIQLGMPIVDFCWHQDGS-HLAIATEGS-VLLTRLM 388 (393)
T ss_dssp CTTEEEEEETTTTEEEEEETTCTT--------------CCEEEEECSSCEEEEEECTTSS-EEEEEESSE-EEEEEEG
T ss_pred CCCEEEEEECCCCEEEEEECCCCc--------------EEEEecCCCCcEEEEEEcCCCC-EEEEEeCCC-eEEEEEe
Confidence 344467788899999999998753 3444556778999999999999 689988666 6667653
No 85
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=100.00 E-value=5.7e-32 Score=288.40 Aligned_cols=249 Identities=18% Similarity=0.341 Sum_probs=215.8
Q ss_pred EEEeccCCceeEEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCCeeeEEecCCCCceEEEEe
Q 014472 119 IQQINHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGS 198 (424)
Q Consensus 119 ~~~~~h~~~v~~i~~~p~~~~~latg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~ 198 (424)
....+|.+.|++++|+|+++ ++|+|+.||.|+|||+.+ ......+.+|...|.+++|+|++. +|++|+
T Consensus 609 ~~~~~h~~~v~~~~~s~~~~-~l~s~~~d~~i~vw~~~~----------~~~~~~~~~h~~~v~~~~~s~~~~-~l~s~~ 676 (1249)
T 3sfz_A 609 LVVRPHTDAVYHACFSQDGQ-RIASCGADKTLQVFKAET----------GEKLLDIKAHEDEVLCCAFSSDDS-YIATCS 676 (1249)
T ss_dssp EEECCCSSCEEEEEECTTSS-EEEEEETTSCEEEEETTT----------CCEEEEECCCSSCEEEEEECTTSS-EEEEEE
T ss_pred EEEecccccEEEEEECCCCC-EEEEEeCCCeEEEEECCC----------CCEEEEeccCCCCEEEEEEecCCC-EEEEEe
Confidence 34558999999999999987 899999999999999987 456778889999999999999887 899999
Q ss_pred CCCcEEEEeCCCCCCCCcccceeeeecCCcceeeEEeeCCC-CcEEEEEeCCCeEEEEECCCCCCCCCeeEecccCCCee
Q 014472 199 DDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRH-EYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVN 277 (424)
Q Consensus 199 ~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~-~~~~~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~ 277 (424)
.||.|++||+.++ ..+..+.+|...|.+++|+|++ ..++++|+.||.|++||++++.. +..+.+|...|+
T Consensus 677 ~d~~v~vwd~~~~------~~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~---~~~~~~h~~~v~ 747 (1249)
T 3sfz_A 677 ADKKVKIWDSATG------KLVHTYDEHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKEC---RNTMFGHTNSVN 747 (1249)
T ss_dssp TTSEEEEEETTTC------CEEEEEECCSSCEEEEEECSSSSCCEEEEEETTSCEEEEETTSSSE---EEEECCCSSCEE
T ss_pred CCCeEEEEECCCC------ceEEEEcCCCCcEEEEEEecCCCceEEEEEeCCCeEEEEECCCcch---hheecCCCCCEE
Confidence 9999999999876 3566778899999999999953 35778999999999999998664 777889999999
Q ss_pred EEEecCCCCeEEEEEeCCCcEEEEECCCCCCccee---------------------------------------------
Q 014472 278 CLAFNPFNEWILATGSTDKTVKLFDLRKISTALHT--------------------------------------------- 312 (424)
Q Consensus 278 ~i~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~--------------------------------------------- 312 (424)
+++|+|++. +|++|+.||.|++||+++. .....
T Consensus 748 ~~~~sp~~~-~l~s~s~dg~v~vwd~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~~~v~~~d 825 (1249)
T 3sfz_A 748 HCRFSPDDE-LLASCSADGTLRLWDVRSA-NERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVAAKNKVLLFD 825 (1249)
T ss_dssp EEEECSSTT-EEEEEESSSEEEEEEGGGT-EEEEEEECCCCC--------CCCCCBCCCCBCTTSSEEEEEETTEEEEEE
T ss_pred EEEEecCCC-EEEEEECCCeEEEEeCCCC-cccceecccccccccCCccccccceEEEEEECCCCCEEEEEcCCcEEEEE
Confidence 999999998 6999999999999998752 11111
Q ss_pred ----------ecCCCCCEEEEEEcCCCCcEEEEEeCCCeEEEeeCCCCCcccCCCccCCCCCeeeEEEcCCCCCcceEEe
Q 014472 313 ----------FDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPEDAEDGPPELLFIHGGHTSKISDFSW 382 (424)
Q Consensus 313 ----------~~~~~~~v~~~~~sp~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~ 382 (424)
..+|...|.+++|+|++. ++++++.||.|++|++..+ ..+..+.+|...|++++|
T Consensus 826 ~~~~~~~~~~~~~~~~~v~~~~~sp~~~-~l~~~~~dg~v~vwd~~~~--------------~~~~~~~~h~~~v~~v~~ 890 (1249)
T 3sfz_A 826 IHTSGLLAEIHTGHHSTIQYCDFSPYDH-LAVIALSQYCVELWNIDSR--------------LKVADCRGHLSWVHGVMF 890 (1249)
T ss_dssp TTTCCEEEEEECSSSSCCCEEEECSSTT-EEEEECSSSCEEEEETTTT--------------EEEEEECCCSSCEEEEEE
T ss_pred ecCCCceeEEcCCCCCceEEEEEcCCCC-EEEEEeCCCeEEEEEcCCC--------------ceeeecCCCccceEEEEE
Confidence 126778899999999986 7889999999999999864 567788899999999999
Q ss_pred CCCCCcEEEEEeCCCcEEEEecCC
Q 014472 383 NPCEDWVISSVAEDNILQIWQMAE 406 (424)
Q Consensus 383 ~~~~~~~l~s~~~d~~i~iw~~~~ 406 (424)
+|+++ .|++++.||.|++|++.+
T Consensus 891 spdg~-~l~s~s~dg~v~vw~~~~ 913 (1249)
T 3sfz_A 891 SPDGS-SFLTASDDQTIRVWETKK 913 (1249)
T ss_dssp CTTSS-EEEEEETTSCEEEEEHHH
T ss_pred CCCCC-EEEEEeCCCeEEEEEccc
Confidence 99999 699999999999999864
No 86
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=100.00 E-value=3.1e-31 Score=253.38 Aligned_cols=250 Identities=17% Similarity=0.277 Sum_probs=206.7
Q ss_pred EeccCCceeEEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCCeeeEEecCC-CCceEEEEeC
Q 014472 121 QINHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKF-KEGHLLSGSD 199 (424)
Q Consensus 121 ~~~h~~~v~~i~~~p~~~~~latg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~-~~~~l~s~~~ 199 (424)
..+|.+.|.+++|+|++ ++++|+.||.|++||+.+ ......+.+|...|.+++|++. +..+|++|+.
T Consensus 158 ~~~h~~~V~~l~~~~~~--~l~s~s~dg~i~vwd~~~----------~~~~~~~~~h~~~v~~l~~~~~~~~~~l~s~s~ 225 (464)
T 3v7d_B 158 LSGHDGGVWALKYAHGG--ILVSGSTDRTVRVWDIKK----------GCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSR 225 (464)
T ss_dssp ECCCSSCEEEEEECSTT--EEEEEETTSCEEEEETTT----------TEEEEEECCCSSCEEEEEEEESSSCEEEEEEET
T ss_pred EeCCCcCEEEEEEcCCC--EEEEEeCCCCEEEEECCC----------CcEEEEECCCCCccEEEEEecCCCCCEEEEEcC
Confidence 34799999999999976 799999999999999987 4566788899999999999952 2247999999
Q ss_pred CCcEEEEeCCCCCCCCcc-----------------cceeeeecCCcceeeEEeeCCCCcEEEEEeCCCeEEEEECCCCCC
Q 014472 200 DAQICLWDINAAPKNKSL-----------------EAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSV 262 (424)
Q Consensus 200 dg~i~vwd~~~~~~~~~~-----------------~~~~~~~~~~~~v~~i~~~~~~~~~~~s~~~dg~i~i~d~~~~~~ 262 (424)
||.|++||+.+....... .....+.+|...|.++. +++. ++++++.||.|++||+++.+
T Consensus 226 d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~--~~~~-~l~~~~~d~~i~vwd~~~~~- 301 (464)
T 3v7d_B 226 DNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTVS--GHGN-IVVSGSYDNTLIVWDVAQMK- 301 (464)
T ss_dssp TSCEEEEECCCCCCC------CCSSEEESCGGGCTTEEEEECCCSSCEEEEE--EETT-EEEEEETTSCEEEEETTTTE-
T ss_pred CCcEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEEccCccceEEEEc--CCCC-EEEEEeCCCeEEEEECCCCc-
Confidence 999999999876533211 02445677888888875 4554 66799999999999999865
Q ss_pred CCCeeEecccCCCeeEEEecCCCCeEEEEEeCCCcEEEEECCCCCCcceeecCCCCCEEEEEEcCCCCcEEEEEeCCCeE
Q 014472 263 SKPVQSVVAHQSEVNCLAFNPFNEWILATGSTDKTVKLFDLRKISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRL 342 (424)
Q Consensus 263 ~~~~~~~~~~~~~v~~i~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~s~~~dg~i 342 (424)
.+..+.+|...|.+++|+|++. .|++|+.||.|++||+++ +.++..+.+|...|.+++|++ .+|++++.||.|
T Consensus 302 --~~~~~~~~~~~v~~~~~~~~~~-~l~sg~~dg~i~vwd~~~-~~~~~~~~~h~~~v~~~~~~~---~~l~s~s~dg~v 374 (464)
T 3v7d_B 302 --CLYILSGHTDRIYSTIYDHERK-RCISASMDTTIRIWDLEN-GELMYTLQGHTALVGLLRLSD---KFLVSAAADGSI 374 (464)
T ss_dssp --EEEEECCCSSCEEEEEEETTTT-EEEEEETTSCEEEEETTT-TEEEEEECCCSSCEEEEEECS---SEEEEEETTSEE
T ss_pred --EEEEecCCCCCEEEEEEcCCCC-EEEEEeCCCcEEEEECCC-CcEEEEEeCCCCcEEEEEEcC---CEEEEEeCCCcE
Confidence 3777888999999999999988 699999999999999998 788999999999999999984 479999999999
Q ss_pred EEeeCCCCCcccCCCccCCCCCeeeEEEcCCCCCcceEEeCCCCCcEEEEEeCCCcEEEEecCCCCCC
Q 014472 343 MVWDLSRIDEEQTPEDAEDGPPELLFIHGGHTSKISDFSWNPCEDWVISSVAEDNILQIWQMAENIYH 410 (424)
Q Consensus 343 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~~ 410 (424)
++||+.... . .... .|...+..++|++++. ++++++ ||.|++|++.++.+.
T Consensus 375 ~vwd~~~~~-------------~-~~~~-~~~~~~~~~~~~~~~~-~l~~~~-dg~i~iwd~~~g~~~ 425 (464)
T 3v7d_B 375 RGWDANDYS-------------R-KFSY-HHTNLSAITTFYVSDN-ILVSGS-ENQFNIYNLRSGKLV 425 (464)
T ss_dssp EEEETTTCC-------------E-EEEE-ECTTCCCEEEEEECSS-EEEEEE-TTEEEEEETTTCCEE
T ss_pred EEEECCCCc-------------e-eeee-cCCCCccEEEEEeCCC-EEEEec-CCeEEEEECCCCcEE
Confidence 999998742 1 2222 2556688899999999 688887 899999999988654
No 87
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.1e-33 Score=265.15 Aligned_cols=259 Identities=13% Similarity=0.169 Sum_probs=190.1
Q ss_pred EeccCCceeEEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEec------------CCCCeeeEE--e
Q 014472 121 QINHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRG------------HSTEGYGLS--W 186 (424)
Q Consensus 121 ~~~h~~~v~~i~~~p~~~~~latg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~------------h~~~v~~l~--~ 186 (424)
.+.|.+.|++++|+|++. +|++|+.||.|++||+.... .......+.+ +...+.++. +
T Consensus 107 ~~~h~~~v~~~~~~~~~~-~l~s~s~dg~i~vwd~~~~~-------~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 178 (437)
T 3gre_A 107 TYDCSSTVTQITMIPNFD-AFAVSSKDGQIIVLKVNHYQ-------QESEVKFLNCECIRKINLKNFGKNEYAVRMRAFV 178 (437)
T ss_dssp EEECSSCEEEEEECTTSS-EEEEEETTSEEEEEEEEEEE-------ETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEE
T ss_pred eccCCCCEEEEEEeCCCC-EEEEEeCCCEEEEEEecccc-------CCceeeccccceeEEEEccCcccccCceEEEEEE
Confidence 346999999999999876 89999999999999995200 0111222221 445566666 4
Q ss_pred cCCCCceEEEEeCCCcEEEEeCCCCCCCCcccceeeeec--CCcceeeEEeeCCCCcEEEEEeCCCeEEEEECCCCCCCC
Q 014472 187 SKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKV--HEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSK 264 (424)
Q Consensus 187 ~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~--~~~~v~~i~~~~~~~~~~~s~~~dg~i~i~d~~~~~~~~ 264 (424)
++++. +|++|+.||.|++||++++ ..+..+.. |...|++++|+|++. ++++|+.||.|++||++.+..
T Consensus 179 ~~~~~-~l~~~~~d~~i~iwd~~~~------~~~~~~~~~~h~~~v~~~~~s~~~~-~l~s~~~dg~i~iwd~~~~~~-- 248 (437)
T 3gre_A 179 NEEKS-LLVALTNLSRVIIFDIRTL------ERLQIIENSPRHGAVSSICIDEECC-VLILGTTRGIIDIWDIRFNVL-- 248 (437)
T ss_dssp CSSCE-EEEEEETTSEEEEEETTTC------CEEEEEECCGGGCCEEEEEECTTSC-EEEEEETTSCEEEEETTTTEE--
T ss_pred cCCCC-EEEEEeCCCeEEEEeCCCC------eeeEEEccCCCCCceEEEEECCCCC-EEEEEcCCCeEEEEEcCCccE--
Confidence 46565 7999999999999999876 34555666 889999999999976 567999999999999998553
Q ss_pred CeeEec-ccCCCeeEEEecC----CCCeEEEEEeCCCcEEEEECCCCCCcceeecC------------------------
Q 014472 265 PVQSVV-AHQSEVNCLAFNP----FNEWILATGSTDKTVKLFDLRKISTALHTFDS------------------------ 315 (424)
Q Consensus 265 ~~~~~~-~~~~~v~~i~~~~----~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~------------------------ 315 (424)
+..+. .|...|++++|+| ++. +|++|+.||.|++||+++ +..+..+.+
T Consensus 249 -~~~~~~~~~~~v~~~~~~~~~s~~~~-~l~s~~~dg~i~iwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 325 (437)
T 3gre_A 249 -IRSWSFGDHAPITHVEVCQFYGKNSV-IVVGGSSKTFLTIWNFVK-GHCQYAFINSDEQPSMEHFLPIEKGLEELNFCG 325 (437)
T ss_dssp -EEEEBCTTCEEEEEEEECTTTCTTEE-EEEEESTTEEEEEEETTT-TEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCC
T ss_pred -EEEEecCCCCceEEEEeccccCCCcc-EEEEEcCCCcEEEEEcCC-CcEEEEEEcCCCCCccceecccccccccceecc
Confidence 55554 6778999997665 444 799999999999999987 454444442
Q ss_pred --CCCCEEEEEEcCCCCcEEEEEeCCCeEEEeeCCCCCcccCCCccCCC-----------------------CCeeeEEE
Q 014472 316 --HKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPEDAEDG-----------------------PPELLFIH 370 (424)
Q Consensus 316 --~~~~v~~~~~sp~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~-----------------------~~~~~~~~ 370 (424)
|...|++++|+ ++ .+|++++.|+.|++||+..+............ ........
T Consensus 326 ~~~~~~v~~l~~~-~~-~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 403 (437)
T 3gre_A 326 IRSLNALSTISVS-ND-KILLTDEATSSIVMFSLNELSSSKAVISPSRFSDVFIPTQVTANLTMLLRKMKRTSTHSVDDS 403 (437)
T ss_dssp CCSGGGGCCEEEE-TT-EEEEEEGGGTEEEEEETTCGGGCEEEECC--CCCEEEEEEEETTEEEEEEECC----------
T ss_pred cccCCceEEEEEC-Cc-eEEEecCCCCeEEEEECCCcccceEEecccccCceEEEEEeecceEEEEEecccccccccCcc
Confidence 55678889999 55 48999999999999999887644322211000 00011122
Q ss_pred cCCCCCcceEEeCCC--CCcEEEEEeCCCcEEEEe
Q 014472 371 GGHTSKISDFSWNPC--EDWVISSVAEDNILQIWQ 403 (424)
Q Consensus 371 ~~h~~~v~~~~~~~~--~~~~l~s~~~d~~i~iw~ 403 (424)
..|...|++++|+++ +. +|++|+.||.|+||+
T Consensus 404 ~~h~~~I~~i~~~~~~~~~-~l~s~~~dG~I~iw~ 437 (437)
T 3gre_A 404 LYHHDIINSISTCEVDETP-LLVACDNSGLIGIFQ 437 (437)
T ss_dssp ---CCCEEEEEEEESSSSE-EEEEEETTSCEEEEC
T ss_pred cccccceeeEeeeccCCce-EEEEEcCCceEEEeC
Confidence 348999999999998 55 899999999999995
No 88
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=100.00 E-value=1.1e-31 Score=251.59 Aligned_cols=248 Identities=21% Similarity=0.327 Sum_probs=201.3
Q ss_pred EEEEEeccCCc--eeEEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEec-CCCCeeeEEecCCCCce
Q 014472 117 QIIQQINHDGE--VNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRG-HSTEGYGLSWSKFKEGH 193 (424)
Q Consensus 117 ~~~~~~~h~~~--v~~i~~~p~~~~~latg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~-h~~~v~~l~~~~~~~~~ 193 (424)
.++..-+|... +.++.|++ . .+++++.||.|++|++.. ......+.. |...|.+++|+|++. +
T Consensus 83 ~~~~~~~~~~~~~~~~~~~s~--~-~l~~~~~d~~v~lw~~~~----------~~~~~~~~~~~~~~v~~v~~s~~~~-~ 148 (401)
T 4aez_A 83 RVLDAPGIIDDYYLNLLDWSN--L-NVVAVALERNVYVWNADS----------GSVSALAETDESTYVASVKWSHDGS-F 148 (401)
T ss_dssp EEEECTTCCCCTTCBCEEECT--T-SEEEEEETTEEEEEETTT----------CCEEEEEECCTTCCEEEEEECTTSS-E
T ss_pred eeeeCCCCcCCceEEEEeecC--C-CEEEEECCCeEEEeeCCC----------CcEeEeeecCCCCCEEEEEECCCCC-E
Confidence 34444456655 44566665 3 366677899999999987 233334443 889999999999887 7
Q ss_pred EEEEeCCCcEEEEeCCCCCCCCcccceeeeecCCcceeeEEeeCCCCcEEEEEeCCCeEEEEECCCCCCCCCeeEecccC
Q 014472 194 LLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQ 273 (424)
Q Consensus 194 l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~ 273 (424)
|++|+.||.|++||+.++ ..+..+.+|...|.+++|++ .++++++.||.|++||++.... .+..+..|.
T Consensus 149 l~~~~~dg~i~iwd~~~~------~~~~~~~~~~~~v~~~~~~~---~~l~~~~~dg~i~i~d~~~~~~--~~~~~~~~~ 217 (401)
T 4aez_A 149 LSVGLGNGLVDIYDVESQ------TKLRTMAGHQARVGCLSWNR---HVLSSGSRSGAIHHHDVRIANH--QIGTLQGHS 217 (401)
T ss_dssp EEEEETTSCEEEEETTTC------CEEEEECCCSSCEEEEEEET---TEEEEEETTSEEEEEETTSSSC--EEEEEECCS
T ss_pred EEEECCCCeEEEEECcCC------eEEEEecCCCCceEEEEECC---CEEEEEcCCCCEEEEecccCcc--eeeEEcCCC
Confidence 999999999999999876 34566778999999999953 3678999999999999985442 466778899
Q ss_pred CCeeEEEecCCCCeEEEEEeCCCcEEEEECCCCCCcceeecCCCCCEEEEEEcCCCCcEEEEEe--CCCeEEEeeCCCCC
Q 014472 274 SEVNCLAFNPFNEWILATGSTDKTVKLFDLRKISTALHTFDSHKEEVFQVGWNPKNETILASCC--LGRRLMVWDLSRID 351 (424)
Q Consensus 274 ~~v~~i~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~s~~--~dg~i~iwd~~~~~ 351 (424)
..|.+++|+|++. +|++|+.||.|++||+++ ..++..+..|...|.+++|+|++..++++++ .|+.|++||+.++
T Consensus 218 ~~v~~~~~~~~~~-~l~s~~~d~~v~iwd~~~-~~~~~~~~~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~- 294 (401)
T 4aez_A 218 SEVCGLAWRSDGL-QLASGGNDNVVQIWDARS-SIPKFTKTNHNAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAATG- 294 (401)
T ss_dssp SCEEEEEECTTSS-EEEEEETTSCEEEEETTC-SSEEEEECCCSSCCCEEEECTTSTTEEEEECCTTTCEEEEEETTTC-
T ss_pred CCeeEEEEcCCCC-EEEEEeCCCeEEEccCCC-CCccEEecCCcceEEEEEECCCCCCEEEEecCCCCCEEEEEECCCC-
Confidence 9999999999887 699999999999999998 7788888999999999999999888888876 7999999999875
Q ss_pred cccCCCccCCCCCeeeEEEcCCCCCcceEEeCCCCCcEEEE--EeCCCcEEEEecCCC
Q 014472 352 EEQTPEDAEDGPPELLFIHGGHTSKISDFSWNPCEDWVISS--VAEDNILQIWQMAEN 407 (424)
Q Consensus 352 ~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s--~~~d~~i~iw~~~~~ 407 (424)
..+..+. |...|.+++|+|++++ +++ |+.||.|++|++.++
T Consensus 295 -------------~~~~~~~-~~~~v~~~~~s~~~~~-l~~~~g~~dg~i~v~~~~~~ 337 (401)
T 4aez_A 295 -------------ARVNTVD-AGSQVTSLIWSPHSKE-IMSTHGFPDNNLSIWSYSSS 337 (401)
T ss_dssp -------------CEEEEEE-CSSCEEEEEECSSSSE-EEEEECTTTCEEEEEEEETT
T ss_pred -------------CEEEEEe-CCCcEEEEEECCCCCe-EEEEeecCCCcEEEEecCCc
Confidence 3344443 4567999999999995 555 348999999999875
No 89
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=100.00 E-value=7.7e-33 Score=262.24 Aligned_cols=220 Identities=14% Similarity=0.221 Sum_probs=180.3
Q ss_pred CCcEEEecCCCCeeeEEecCCCCceEEEEeCCCcEEEEeCCCCCCCCcccceeeeecCCcceeeEEeeCCCCcEEEEEeC
Q 014472 169 SPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGD 248 (424)
Q Consensus 169 ~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~~s~~~ 248 (424)
.......+|...|++|+|+|.+..+||+|+.||.|+|||+.++.. .....+.+|.+.|++|+|+|.+..+|++|+.
T Consensus 110 ~~~~~~~~~~~~V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~~----~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~ 185 (435)
T 4e54_B 110 RILQKAAPFDRRATSLAWHPTHPSTVAVGSKGGDIMLWNFGIKDK----PTFIKGIGAGGSITGLKFNPLNTNQFYASSM 185 (435)
T ss_dssp TSCCEEEECSSCEEEEEECSSCTTCEEEEETTSCEEEECSSCCSC----CEEECCCSSSCCCCEEEECSSCTTEEEEECS
T ss_pred eecccCCCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEEECCCCCc----eeEEEccCCCCCEEEEEEeCCCCCEEEEEeC
Confidence 334566789999999999998777899999999999999987643 2334466899999999999965567889999
Q ss_pred CCeEEEEECCCCCCCCCeeEecccCCCeeEEEecCCCCeEEEEEeCCCcEEEEECCCCCCcceeecCCCCCEEEEEEcCC
Q 014472 249 DQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATGSTDKTVKLFDLRKISTALHTFDSHKEEVFQVGWNPK 328 (424)
Q Consensus 249 dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~sp~ 328 (424)
||+|++||+++... ..+.....+...+.+++|+|++. +|++|+.||.|++||++. ..+..+.+|...|++++|+|+
T Consensus 186 D~~v~iwd~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-~l~~g~~dg~i~~wd~~~--~~~~~~~~h~~~v~~v~~~p~ 261 (435)
T 4e54_B 186 EGTTRLQDFKGNIL-RVFASSDTINIWFCSLDVSASSR-MVVTGDNVGNVILLNMDG--KELWNLRMHKKKVTHVALNPC 261 (435)
T ss_dssp SSCEEEEETTSCEE-EEEECCSSCSCCCCCEEEETTTT-EEEEECSSSBEEEEESSS--CBCCCSBCCSSCEEEEEECTT
T ss_pred CCEEEEeeccCCce-eEEeccCCCCccEEEEEECCCCC-EEEEEeCCCcEeeeccCc--ceeEEEecccceEEeeeecCC
Confidence 99999999986431 11111123445688999999988 699999999999999974 567888999999999999999
Q ss_pred CCcEEEEEeCCCeEEEeeCCCCCcccCCCccCCCCCeeeEEEcCCCCCcceEEeCCCCCcEEEEEeCCCcEEEEecCCCC
Q 014472 329 NETILASCCLGRRLMVWDLSRIDEEQTPEDAEDGPPELLFIHGGHTSKISDFSWNPCEDWVISSVAEDNILQIWQMAENI 408 (424)
Q Consensus 329 ~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~ 408 (424)
++.+|++++.|+.|+|||++...... .+....+|...|++++|+|++. +|++++.||.|+||++.++.
T Consensus 262 ~~~~~~s~s~d~~v~iwd~~~~~~~~-----------~~~~~~~h~~~v~~~~~spdg~-~l~s~~~D~~i~iwd~~~~~ 329 (435)
T 4e54_B 262 CDWFLATASVDQTVKIWDLRQVRGKA-----------SFLYSLPHRHPVNAACFSPDGA-RLLTTDQKSEIRVYSASQWD 329 (435)
T ss_dssp CSSEEEEEETTSBCCEEETTTCCSSS-----------CCSBCCBCSSCEEECCBCTTSS-EEEEEESSSCEEEEESSSSS
T ss_pred CceEEEEecCcceeeEEecccccccc-----------eEEEeeeccccccceeECCCCC-eeEEEcCCCEEEEEECCCCc
Confidence 98899999999999999998754322 1223357889999999999999 69999999999999998763
No 90
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=100.00 E-value=6.4e-32 Score=255.46 Aligned_cols=274 Identities=16% Similarity=0.271 Sum_probs=212.4
Q ss_pred EEeccCCceeEEEecCCCC---------cEEEEEec----CCeEEEEeCCCCCC--C------------CCC--CCC-CC
Q 014472 120 QQINHDGEVNRARYMPQNP---------FLIATKTV----SAEVYVFDYSKHPS--K------------PPL--DGA-CS 169 (424)
Q Consensus 120 ~~~~h~~~v~~i~~~p~~~---------~~latg~~----dg~v~iwd~~~~~~--~------------~~~--~~~-~~ 169 (424)
....-.-+..++.|.|+.. ..+++|+. ...|.++++.-... . ... ... ..
T Consensus 40 ~~~~l~wp~l~~~~~p~~~~~~~~~~~~~~~~~GT~t~~~~n~i~i~~~~lp~~~~~~~~~~~d~~~~~~~~~~~~~~~~ 119 (430)
T 2xyi_A 40 MTHALEWPSLTAQWLPDVTKQDGKDYSVHRLILGTHTSDEQNHLLIASVQLPSEDAQFDGSHYDNEKGEFGGFGSVCGKI 119 (430)
T ss_dssp EEEECSSCCSCEEECSCCEECTTCSCEEEEEEEECCCSSSCEEEEEEEEEEC--------------------------CE
T ss_pred hhcCCCCCceEEEECcccccccCCCcceEEEEEEEcCCCCCCEEEEEEEECCCCccccccccccccccccccccCCCCce
Confidence 3334445678888888653 45777664 35677776541000 0 000 000 11
Q ss_pred CcEEEecCCCCeeeEEecCCCCceEEEEeCCCcEEEEeCCCCCCC----CcccceeeeecCCcceeeEEeeCCCCcEEEE
Q 014472 170 PDLRLRGHSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKN----KSLEAMQIFKVHEGVVEDVAWHLRHEYLFGS 245 (424)
Q Consensus 170 ~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~----~~~~~~~~~~~~~~~v~~i~~~~~~~~~~~s 245 (424)
.......|.+.|++++|+|++..+|++++.||.|++|++...... .....+..+.+|...|.+++|+|++..+|++
T Consensus 120 ~~~~~~~h~~~v~~l~~~p~~~~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s 199 (430)
T 2xyi_A 120 EIEIKINHEGEVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNPNLNGYLLS 199 (430)
T ss_dssp EEEEEEEESSCCSEEEEETTEEEEEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEECCSSCCCCEEECTTSTTEEEE
T ss_pred EEEEEEcCCCcEEEEEECCCCCcEEEEECCCCcEEEEECCCcccccCccccCCCcEEecCCCCCeEEEEeCCCCCCeEEE
Confidence 124456799999999999985558999999999999999753111 1134566778899999999999998867889
Q ss_pred EeCCCeEEEEECCCCCCC----CCeeEecccCCCeeEEEecCCCCeEEEEEeCCCcEEEEECCCCC--CcceeecCCCCC
Q 014472 246 VGDDQYLLIWDLRTPSVS----KPVQSVVAHQSEVNCLAFNPFNEWILATGSTDKTVKLFDLRKIS--TALHTFDSHKEE 319 (424)
Q Consensus 246 ~~~dg~i~i~d~~~~~~~----~~~~~~~~~~~~v~~i~~~~~~~~~l~~g~~dg~i~iwd~~~~~--~~~~~~~~~~~~ 319 (424)
|+.||.|++||++..... .+...+..|...|.+++|+|.+..+|++++.||.|++||++... .++..+..|...
T Consensus 200 ~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~ 279 (430)
T 2xyi_A 200 ASDDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVDAHTAE 279 (430)
T ss_dssp ECTTSCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCSEEEECCSSC
T ss_pred EeCCCeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcceeEeecCCCC
Confidence 999999999999874321 12455678999999999999766689999999999999999742 577888899999
Q ss_pred EEEEEEcCCCCcEEEEEeCCCeEEEeeCCCCCcccCCCccCCCCCeeeEEEcCCCCCcceEEeCCCCCcEEEEEeCCCcE
Q 014472 320 VFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPEDAEDGPPELLFIHGGHTSKISDFSWNPCEDWVISSVAEDNIL 399 (424)
Q Consensus 320 v~~~~~sp~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i 399 (424)
|++++|+|+++.+|++|+.||.|++||++... ..+..+.+|...|++++|+|+++.+|++++.|+.|
T Consensus 280 v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~-------------~~~~~~~~h~~~v~~i~~sp~~~~~l~s~~~d~~i 346 (430)
T 2xyi_A 280 VNCLSFNPYSEFILATGSADKTVALWDLRNLK-------------LKLHSFESHKDEIFQVQWSPHNETILASSGTDRRL 346 (430)
T ss_dssp EEEEEECSSCTTEEEEEETTSEEEEEETTCTT-------------SCSEEEECCSSCEEEEEECSSCTTEEEEEETTSCC
T ss_pred eEEEEeCCCCCCEEEEEeCCCeEEEEeCCCCC-------------CCeEEeecCCCCEEEEEECCCCCCEEEEEeCCCcE
Confidence 99999999998889999999999999998743 34666778999999999999998789999999999
Q ss_pred EEEecCC
Q 014472 400 QIWQMAE 406 (424)
Q Consensus 400 ~iw~~~~ 406 (424)
+||++..
T Consensus 347 ~iwd~~~ 353 (430)
T 2xyi_A 347 HVWDLSK 353 (430)
T ss_dssp EEEEGGG
T ss_pred EEEeCCC
Confidence 9999987
No 91
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=2.3e-31 Score=240.67 Aligned_cols=213 Identities=24% Similarity=0.432 Sum_probs=184.7
Q ss_pred CCCcEEEecCCCCeeeEEecCCCCceEEEEeCCCcEEEEeCCCCCCCCcccceeeeecCCcceeeEEeeCCCCcEEEEEe
Q 014472 168 CSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVG 247 (424)
Q Consensus 168 ~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~~s~~ 247 (424)
......+.+|...|++++|+|++. +|++|+.||.|++|++.++. ....+.+|...|.+++|+|+++ +|++++
T Consensus 13 ~~~~~~~~gh~~~v~~~~~s~~~~-~l~s~~~dg~i~iw~~~~~~------~~~~~~~h~~~v~~~~~~~~~~-~l~s~~ 84 (312)
T 4ery_A 13 YALKFTLAGHTKAVSSVKFSPNGE-WLASSSADKLIKIWGAYDGK------FEKTISGHKLGISDVAWSSDSN-LLVSAS 84 (312)
T ss_dssp CEEEEEECCCSSCEEEEEECTTSS-EEEEEETTSCEEEEETTTCC------EEEEECCCSSCEEEEEECTTSS-EEEEEE
T ss_pred ceeEEEEcccCCcEEEEEECCCCC-EEEEeeCCCeEEEEeCCCcc------cchhhccCCCceEEEEEcCCCC-EEEEEC
Confidence 344567889999999999999887 89999999999999997652 4556778999999999999986 567999
Q ss_pred CCCeEEEEECCCCCCCCCeeEecccCCCeeEEEecCCCCeEEEEEeCCCcEEEEECCCCCCcceeecCCCCCEEEEEEcC
Q 014472 248 DDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATGSTDKTVKLFDLRKISTALHTFDSHKEEVFQVGWNP 327 (424)
Q Consensus 248 ~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~sp 327 (424)
.|+.|++||+++++. +..+..|...|.+++|+|++. +|++|+.||.|++||+++ +..+..+..|..+|.+++|+|
T Consensus 85 ~d~~i~vwd~~~~~~---~~~~~~~~~~v~~~~~~~~~~-~l~s~~~d~~i~iwd~~~-~~~~~~~~~~~~~v~~~~~~~ 159 (312)
T 4ery_A 85 DDKTLKIWDVSSGKC---LKTLKGHSNYVFCCNFNPQSN-LIVSGSFDESVRIWDVKT-GKCLKTLPAHSDPVSAVHFNR 159 (312)
T ss_dssp TTSEEEEEETTTCCE---EEEEECCSSCEEEEEECSSSS-EEEEEETTSCEEEEETTT-CCEEEEECCCSSCEEEEEECT
T ss_pred CCCEEEEEECCCCcE---EEEEcCCCCCEEEEEEcCCCC-EEEEEeCCCcEEEEECCC-CEEEEEecCCCCcEEEEEEcC
Confidence 999999999998664 777889999999999999987 699999999999999998 678889999999999999999
Q ss_pred CCCcEEEEEeCCCeEEEeeCCCCCcccCCCccCCCCCeeeEEEcCCCCCcceEEeCCCCCcEEEEEeCCCcEEEEecCCC
Q 014472 328 KNETILASCCLGRRLMVWDLSRIDEEQTPEDAEDGPPELLFIHGGHTSKISDFSWNPCEDWVISSVAEDNILQIWQMAEN 407 (424)
Q Consensus 328 ~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iw~~~~~ 407 (424)
++. +|++++.||.|++||++... .+......+...+..++|+|+++ +|++++.|+.|++||+.++
T Consensus 160 ~~~-~l~~~~~d~~i~~wd~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~-~l~~~~~d~~i~iwd~~~~ 224 (312)
T 4ery_A 160 DGS-LIVSSSYDGLCRIWDTASGQ-------------CLKTLIDDDNPPVSFVKFSPNGK-YILAATLDNTLKLWDYSKG 224 (312)
T ss_dssp TSS-EEEEEETTSCEEEEETTTCC-------------EEEEECCSSCCCEEEEEECTTSS-EEEEEETTTEEEEEETTTT
T ss_pred CCC-EEEEEeCCCcEEEEECCCCc-------------eeeEEeccCCCceEEEEECCCCC-EEEEEcCCCeEEEEECCCC
Confidence 986 79999999999999998753 12222345667799999999999 6889999999999999876
Q ss_pred C
Q 014472 408 I 408 (424)
Q Consensus 408 ~ 408 (424)
.
T Consensus 225 ~ 225 (312)
T 4ery_A 225 K 225 (312)
T ss_dssp E
T ss_pred c
Confidence 4
No 92
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=100.00 E-value=3e-31 Score=251.37 Aligned_cols=249 Identities=22% Similarity=0.399 Sum_probs=202.8
Q ss_pred EeccCCceeEEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCCeeeEEecCCCCceEEEEeCC
Q 014472 121 QINHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDD 200 (424)
Q Consensus 121 ~~~h~~~v~~i~~~p~~~~~latg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~d 200 (424)
..+|.+.|.+++| ++. +|++|+.||.|++||+.+ ......+.+|...|.+++|++ ++|++|+.|
T Consensus 169 ~~~h~~~v~~l~~--~~~-~l~sg~~dg~i~vwd~~~----------~~~~~~~~~h~~~v~~l~~~~---~~l~s~s~d 232 (435)
T 1p22_A 169 LTGHTGSVLCLQY--DER-VIITGSSDSTVRVWDVNT----------GEMLNTLIHHCEAVLHLRFNN---GMMVTCSKD 232 (435)
T ss_dssp ECCCSSCEEEEEC--CSS-EEEEEETTSCEEEEESSS----------CCEEEEECCCCSCEEEEECCT---TEEEEEETT
T ss_pred EcCCCCcEEEEEE--CCC-EEEEEcCCCeEEEEECCC----------CcEEEEEcCCCCcEEEEEEcC---CEEEEeeCC
Confidence 3479999999999 444 899999999999999987 456778889999999999974 379999999
Q ss_pred CcEEEEeCCCCCCCCcccceeeeecCCcceeeEEeeCCCCcEEEEEeCCCeEEEEECCCCCCCCCeeEecccCCCeeEEE
Q 014472 201 AQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLA 280 (424)
Q Consensus 201 g~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~ 280 (424)
|.|++||+.++... .....+.+|...|.+++|. +. .+++|+.||.|++||+++++. +..+..|...|.+++
T Consensus 233 g~i~vwd~~~~~~~---~~~~~~~~~~~~v~~~~~~--~~-~l~s~~~dg~i~vwd~~~~~~---~~~~~~~~~~v~~~~ 303 (435)
T 1p22_A 233 RSIAVWDMASPTDI---TLRRVLVGHRAAVNVVDFD--DK-YIVSASGDRTIKVWNTSTCEF---VRTLNGHKRGIACLQ 303 (435)
T ss_dssp SCEEEEECSSSSCC---EEEEEECCCSSCEEEEEEE--TT-EEEEEETTSEEEEEETTTCCE---EEEEECCSSCEEEEE
T ss_pred CcEEEEeCCCCCCc---eeeeEecCCCCcEEEEEeC--CC-EEEEEeCCCeEEEEECCcCcE---EEEEcCCCCcEEEEE
Confidence 99999999876432 2235567899999999993 43 677999999999999998664 777888999999999
Q ss_pred ecCCCCeEEEEEeCCCcEEEEECCCCCCcceeecCCCCCEEEEEEcCCCCcEEEEEeCCCeEEEeeCCCCCcccCCCccC
Q 014472 281 FNPFNEWILATGSTDKTVKLFDLRKISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPEDAE 360 (424)
Q Consensus 281 ~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~ 360 (424)
|+ +. ++++|+.||.|++||+++ +.++..+.+|...|.+++| ++ .+|++|+.||.|++||+.........
T Consensus 304 ~~--~~-~l~~g~~dg~i~iwd~~~-~~~~~~~~~h~~~v~~~~~--~~-~~l~sg~~dg~i~vwd~~~~~~~~~~---- 372 (435)
T 1p22_A 304 YR--DR-LVVSGSSDNTIRLWDIEC-GACLRVLEGHEELVRCIRF--DN-KRIVSGAYDGKIKVWDLVAALDPRAP---- 372 (435)
T ss_dssp EE--TT-EEEEEETTSCEEEEETTT-CCEEEEECCCSSCEEEEEC--CS-SEEEEEETTSCEEEEEHHHHTSTTSC----
T ss_pred eC--CC-EEEEEeCCCeEEEEECCC-CCEEEEEeCCcCcEEEEEe--cC-CEEEEEeCCCcEEEEECCCCCCcccc----
Confidence 95 44 699999999999999998 7888999999999999999 44 47999999999999999765322111
Q ss_pred CCCCeeeEEEcCCCCCcceEEeCCCCCcEEEEEeCCCcEEEEecCCCCC
Q 014472 361 DGPPELLFIHGGHTSKISDFSWNPCEDWVISSVAEDNILQIWQMAENIY 409 (424)
Q Consensus 361 ~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~ 409 (424)
....++..+.+|...|++++| ++. .|++++.||.|++|++.+...
T Consensus 373 -~~~~~~~~~~~h~~~v~~l~~--~~~-~l~s~s~Dg~i~iwd~~~~~~ 417 (435)
T 1p22_A 373 -AGTLCLRTLVEHSGRVFRLQF--DEF-QIVSSSHDDTILIWDFLNDPA 417 (435)
T ss_dssp -TTTTEEEEECCCSSCCCCEEE--CSS-CEEECCSSSEEEEEC------
T ss_pred -ccchheeeccCCCCCeEEEEe--CCC-EEEEEeCCCEEEEEECCCCCC
Confidence 111267788899999999999 566 589999999999999987643
No 93
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=100.00 E-value=1.8e-31 Score=263.75 Aligned_cols=253 Identities=17% Similarity=0.298 Sum_probs=211.7
Q ss_pred ccCCceeEEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCC-eeeEEecC--CCCceEEEEeC
Q 014472 123 NHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTE-GYGLSWSK--FKEGHLLSGSD 199 (424)
Q Consensus 123 ~h~~~v~~i~~~p~~~~~latg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~h~~~-v~~l~~~~--~~~~~l~s~~~ 199 (424)
.|.+.|.+++|+|+++ +||+++ ++.|+||++.... ........+.+|... |++++|+| ++. +|++|+.
T Consensus 16 ~~~~~v~~~~~spdg~-~l~~~~-~~~v~v~~~~~~~------~~~~~~~~~~~h~~~~v~~~~~sp~~~~~-~l~s~~~ 86 (615)
T 1pgu_A 16 TQRNFTTHLSYDPTTN-AIAYPC-GKSAFVRCLDDGD------SKVPPVVQFTGHGSSVVTTVKFSPIKGSQ-YLCSGDE 86 (615)
T ss_dssp CCTTCCCCCEEETTTT-EEEEEE-TTEEEEEECCSSC------CSSCSEEEECTTTTSCEEEEEECSSTTCC-EEEEEET
T ss_pred CccCceeEEEECCCCC-EEEEec-CCeEEEEECCCCC------CccccceEEecCCCceEEEEEECcCCCCC-EEEEecC
Confidence 5889999999999997 777777 7899999998610 011567788999999 99999999 887 8999999
Q ss_pred CCcEEEEeCCCCCCCC--cccceeeeecCCcceeeEEeeCCCCcEEEEEeCC----CeEEEEECCCCCCCCCeeEecccC
Q 014472 200 DAQICLWDINAAPKNK--SLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDD----QYLLIWDLRTPSVSKPVQSVVAHQ 273 (424)
Q Consensus 200 dg~i~vwd~~~~~~~~--~~~~~~~~~~~~~~v~~i~~~~~~~~~~~s~~~d----g~i~i~d~~~~~~~~~~~~~~~~~ 273 (424)
||.|++||+.++.... .......+..|...|.+++|+|++..+ ++++.+ +.|++||.. . .+..+..|.
T Consensus 87 dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l-~~~~~~~~~~~~v~~~d~~--~---~~~~~~~~~ 160 (615)
T 1pgu_A 87 SGKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRL-CVVGEGRDNFGVFISWDSG--N---SLGEVSGHS 160 (615)
T ss_dssp TSEEEEEEEEEEGGGTEEEEEEEEEEECCSSCEEEEEECTTSSEE-EEEECCSSCSEEEEETTTC--C---EEEECCSCS
T ss_pred CCEEEEEeCCCCcccccccccccchhhcccccEEEEEEeCCCCEE-EEeccCCCCccEEEEEECC--C---cceeeecCC
Confidence 9999999996431000 113455677899999999999999754 577776 789999832 2 467778899
Q ss_pred CCeeEEEecCCCCeEEEEEeCCCcEEEEECCCCCCcceeecCCCC---CEEEEEEcCC-CCcEEEEEeCCCeEEEeeCCC
Q 014472 274 SEVNCLAFNPFNEWILATGSTDKTVKLFDLRKISTALHTFDSHKE---EVFQVGWNPK-NETILASCCLGRRLMVWDLSR 349 (424)
Q Consensus 274 ~~v~~i~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~~---~v~~~~~sp~-~~~~l~s~~~dg~i~iwd~~~ 349 (424)
..|++++|+|+++.+|++++.|+.|++||++. ...+..+..|.. .|.+++|+|+ +. +|++++.||.|++||+..
T Consensus 161 ~~v~~~~~~~~~~~~l~~~~~d~~v~vwd~~~-~~~~~~~~~~~~~~~~v~~~~~~~~~~~-~l~~~~~dg~i~vwd~~~ 238 (615)
T 1pgu_A 161 QRINACHLKQSRPMRSMTVGDDGSVVFYQGPP-FKFSASDRTHHKQGSFVRDVEFSPDSGE-FVITVGSDRKISCFDGKS 238 (615)
T ss_dssp SCEEEEEECSSSSCEEEEEETTTEEEEEETTT-BEEEEEECSSSCTTCCEEEEEECSTTCC-EEEEEETTCCEEEEETTT
T ss_pred ccEEEEEECCCCCcEEEEEeCCCcEEEEeCCC-cceeeeecccCCCCceEEEEEECCCCCC-EEEEEeCCCeEEEEECCC
Confidence 99999999999987899999999999999987 678888999999 9999999999 75 799999999999999987
Q ss_pred CCcccCCCccCCCCCeeeEEE-c---CCCCCcceEEeCCCCCcEEEEEeCCCcEEEEecCCCC
Q 014472 350 IDEEQTPEDAEDGPPELLFIH-G---GHTSKISDFSWNPCEDWVISSVAEDNILQIWQMAENI 408 (424)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~~~-~---~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~ 408 (424)
+ +.+..+ . +|...|.+++|+ ++. +|++++.|+.|++|++.++.
T Consensus 239 ~--------------~~~~~~~~~~~~~~~~v~~~~~~-~~~-~l~~~~~d~~i~~wd~~~~~ 285 (615)
T 1pgu_A 239 G--------------EFLKYIEDDQEPVQGGIFALSWL-DSQ-KFATVGADATIRVWDVTTSK 285 (615)
T ss_dssp C--------------CEEEECCBTTBCCCSCEEEEEES-SSS-EEEEEETTSEEEEEETTTTE
T ss_pred C--------------CEeEEecccccccCCceEEEEEc-CCC-EEEEEcCCCcEEEEECCCCc
Confidence 5 445555 5 899999999999 888 79999999999999998764
No 94
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=100.00 E-value=5.9e-31 Score=280.59 Aligned_cols=267 Identities=20% Similarity=0.347 Sum_probs=216.4
Q ss_pred EeccCCceeEEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCCeeeEEecCCCC-ceEEEEeC
Q 014472 121 QINHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKE-GHLLSGSD 199 (424)
Q Consensus 121 ~~~h~~~v~~i~~~p~~~~~latg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~-~~l~s~~~ 199 (424)
...|.+.|.+++|+|++. +||+|+.||.|+|||+.+ ......+.+|...|.+++|+|++. .++++|+.
T Consensus 653 ~~~h~~~v~~~~~s~~~~-~l~s~~~d~~v~vwd~~~----------~~~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~ 721 (1249)
T 3sfz_A 653 IKAHEDEVLCCAFSSDDS-YIATCSADKKVKIWDSAT----------GKLVHTYDEHSEQVNCCHFTNKSNHLLLATGSN 721 (1249)
T ss_dssp ECCCSSCEEEEEECTTSS-EEEEEETTSEEEEEETTT----------CCEEEEEECCSSCEEEEEECSSSSCCEEEEEET
T ss_pred eccCCCCEEEEEEecCCC-EEEEEeCCCeEEEEECCC----------CceEEEEcCCCCcEEEEEEecCCCceEEEEEeC
Confidence 347999999999999986 899999999999999987 466778899999999999999633 36889999
Q ss_pred CCcEEEEeCCCCCCCCcccceeeeecCCcceeeEEeeCCCCcEEEEEeCCCeEEEEECCCCCCCC---------------
Q 014472 200 DAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSK--------------- 264 (424)
Q Consensus 200 dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~~s~~~dg~i~i~d~~~~~~~~--------------- 264 (424)
||.|++||+.++ .....+.+|...|++++|+|++. .+++++.||.|++||++++....
T Consensus 722 d~~v~vwd~~~~------~~~~~~~~h~~~v~~~~~sp~~~-~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~ 794 (1249)
T 3sfz_A 722 DFFLKLWDLNQK------ECRNTMFGHTNSVNHCRFSPDDE-LLASCSADGTLRLWDVRSANERKSINVKRFFLSSEDPP 794 (1249)
T ss_dssp TSCEEEEETTSS------SEEEEECCCSSCEEEEEECSSTT-EEEEEESSSEEEEEEGGGTEEEEEEECCCCC-------
T ss_pred CCeEEEEECCCc------chhheecCCCCCEEEEEEecCCC-EEEEEECCCeEEEEeCCCCcccceecccccccccCCcc
Confidence 999999999876 34566778999999999999987 56799999999999987642100
Q ss_pred ------------------------------------CeeE-ecccCCCeeEEEecCCCCeEEEEEeCCCcEEEEECCCCC
Q 014472 265 ------------------------------------PVQS-VVAHQSEVNCLAFNPFNEWILATGSTDKTVKLFDLRKIS 307 (424)
Q Consensus 265 ------------------------------------~~~~-~~~~~~~v~~i~~~~~~~~~l~~g~~dg~i~iwd~~~~~ 307 (424)
.+.. ..+|...|.+++|+|++. ++++|+.||.|++||+.+ +
T Consensus 795 ~~~~~~v~~~~~s~dg~~l~~~~~~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~-~l~~~~~dg~v~vwd~~~-~ 872 (1249)
T 3sfz_A 795 EDVEVIVKCCSWSADGDKIIVAAKNKVLLFDIHTSGLLAEIHTGHHSTIQYCDFSPYDH-LAVIALSQYCVELWNIDS-R 872 (1249)
T ss_dssp -CCCCCBCCCCBCTTSSEEEEEETTEEEEEETTTCCEEEEEECSSSSCCCEEEECSSTT-EEEEECSSSCEEEEETTT-T
T ss_pred ccccceEEEEEECCCCCEEEEEcCCcEEEEEecCCCceeEEcCCCCCceEEEEEcCCCC-EEEEEeCCCeEEEEEcCC-C
Confidence 0011 126788999999999988 699999999999999998 7
Q ss_pred CcceeecCCCCCEEEEEEcCCCCcEEEEEeCCCeEEEeeCCCCCcccC--------------------------------
Q 014472 308 TALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQT-------------------------------- 355 (424)
Q Consensus 308 ~~~~~~~~~~~~v~~~~~sp~~~~~l~s~~~dg~i~iwd~~~~~~~~~-------------------------------- 355 (424)
..+..+.+|...|.+++|+|++. +|++++.||.|++|++........
T Consensus 873 ~~~~~~~~h~~~v~~v~~spdg~-~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 951 (1249)
T 3sfz_A 873 LKVADCRGHLSWVHGVMFSPDGS-SFLTASDDQTIRVWETKKVCKNSAIVLKQEIDVVFQENETMVLAVDNIRGLQLIAG 951 (1249)
T ss_dssp EEEEEECCCSSCEEEEEECTTSS-EEEEEETTSCEEEEEHHHHHSCCSSSEEEEEEEEEETTEEEEEEEESSSSEEEEEE
T ss_pred ceeeecCCCccceEEEEECCCCC-EEEEEeCCCeEEEEEccccceeeeecccceeeEEEcCCCcEEEEecCCcceEEEec
Confidence 88889999999999999999996 799999999999999653110000
Q ss_pred -------------------CC------ccCC--------CCCeeeEEEcCCCCCcceEEeCCCCCcEEEEEeCCCcEEEE
Q 014472 356 -------------------PE------DAED--------GPPELLFIHGGHTSKISDFSWNPCEDWVISSVAEDNILQIW 402 (424)
Q Consensus 356 -------------------~~------~~~~--------~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iw 402 (424)
.. ...+ ..........+|...|++++|+|+++ .|++++.||.|++|
T Consensus 952 ~~~~~~~~~~~~i~~~~~sp~g~~l~~g~~~g~i~i~d~~~~~~~~~~~~h~~~v~~l~~s~dg~-~l~s~~~dg~i~vw 1030 (1249)
T 3sfz_A 952 KTGQIDYLPEAQVSCCCLSPHLEYVAFGDEDGAIKIIELPNNRVFSSGVGHKKAVRHIQFTADGK-TLISSSEDSVIQVW 1030 (1249)
T ss_dssp SSCCEEEECCSCEEEEEECTTSSEEEEEETTSCCEEEETTTTSCEEECCCCSSCCCCEEECSSSS-CEEEECSSSBEEEE
T ss_pred CcceEEEcccCcEEEEEEcCCCCEEEEEcCCCCEEEEEcCCCceeeecccCCCceEEEEECCCCC-EEEEEcCCCEEEEE
Confidence 00 0000 11234456678999999999999999 58999999999999
Q ss_pred ecCCCCC
Q 014472 403 QMAENIY 409 (424)
Q Consensus 403 ~~~~~~~ 409 (424)
++.++..
T Consensus 1031 d~~~~~~ 1037 (1249)
T 3sfz_A 1031 NWQTGDY 1037 (1249)
T ss_dssp ETTTTEE
T ss_pred ECCCCce
Confidence 9988744
No 95
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=100.00 E-value=1e-30 Score=247.62 Aligned_cols=238 Identities=18% Similarity=0.367 Sum_probs=203.5
Q ss_pred eccCCceeEEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCCeeeEEecCCCCceEEEEeCCC
Q 014472 122 INHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDDA 201 (424)
Q Consensus 122 ~~h~~~v~~i~~~p~~~~~latg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg 201 (424)
..|...|.++++ ++. ++++|+.||.|++||+.+ ......+.+|...|.+++| ++. +|++|+.||
T Consensus 130 ~~~~~~v~~~~~--d~~-~l~~g~~dg~i~iwd~~~----------~~~~~~~~~h~~~v~~l~~--~~~-~l~sg~~dg 193 (435)
T 1p22_A 130 SETSKGVYCLQY--DDQ-KIVSGLRDNTIKIWDKNT----------LECKRILTGHTGSVLCLQY--DER-VIITGSSDS 193 (435)
T ss_dssp CSSCCCEEEEEC--CSS-EEEEEESSSCEEEEESSS----------CCEEEEECCCSSCEEEEEC--CSS-EEEEEETTS
T ss_pred cCCCCcEEEEEE--CCC-EEEEEeCCCeEEEEeCCC----------CeEEEEEcCCCCcEEEEEE--CCC-EEEEEcCCC
Confidence 356778999888 454 899999999999999987 4567788899999999999 344 899999999
Q ss_pred cEEEEeCCCCCCCCcccceeeeecCCcceeeEEeeCCCCcEEEEEeCCCeEEEEECCCCCCCCCeeEecccCCCeeEEEe
Q 014472 202 QICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAF 281 (424)
Q Consensus 202 ~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~ 281 (424)
.|++||+.++ ..+..+.+|...|.+++|++ ..+++|+.||.|++||++++........+.+|...|.+++|
T Consensus 194 ~i~vwd~~~~------~~~~~~~~h~~~v~~l~~~~---~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~ 264 (435)
T 1p22_A 194 TVRVWDVNTG------EMLNTLIHHCEAVLHLRFNN---GMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDF 264 (435)
T ss_dssp CEEEEESSSC------CEEEEECCCCSCEEEEECCT---TEEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEE
T ss_pred eEEEEECCCC------cEEEEEcCCCCcEEEEEEcC---CEEEEeeCCCcEEEEeCCCCCCceeeeEecCCCCcEEEEEe
Confidence 9999999876 34566778999999999974 36789999999999999987653333667889999999999
Q ss_pred cCCCCeEEEEEeCCCcEEEEECCCCCCcceeecCCCCCEEEEEEcCCCCcEEEEEeCCCeEEEeeCCCCCcccCCCccCC
Q 014472 282 NPFNEWILATGSTDKTVKLFDLRKISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPEDAED 361 (424)
Q Consensus 282 ~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~ 361 (424)
++. +|++|+.||.|++||+++ +.++..+.+|...|.++.|+ + .+|++|+.||.|++||++++
T Consensus 265 --~~~-~l~s~~~dg~i~vwd~~~-~~~~~~~~~~~~~v~~~~~~--~-~~l~~g~~dg~i~iwd~~~~----------- 326 (435)
T 1p22_A 265 --DDK-YIVSASGDRTIKVWNTST-CEFVRTLNGHKRGIACLQYR--D-RLVVSGSSDNTIRLWDIECG----------- 326 (435)
T ss_dssp --ETT-EEEEEETTSEEEEEETTT-CCEEEEEECCSSCEEEEEEE--T-TEEEEEETTSCEEEEETTTC-----------
T ss_pred --CCC-EEEEEeCCCeEEEEECCc-CcEEEEEcCCCCcEEEEEeC--C-CEEEEEeCCCeEEEEECCCC-----------
Confidence 355 699999999999999998 78889999999999999995 3 47999999999999999875
Q ss_pred CCCeeeEEEcCCCCCcceEEeCCCCCcEEEEEeCCCcEEEEecCCCC
Q 014472 362 GPPELLFIHGGHTSKISDFSWNPCEDWVISSVAEDNILQIWQMAENI 408 (424)
Q Consensus 362 ~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~ 408 (424)
.++..+.+|...|.+++| ++. +|++|+.||.|++||+..+.
T Consensus 327 ---~~~~~~~~h~~~v~~~~~--~~~-~l~sg~~dg~i~vwd~~~~~ 367 (435)
T 1p22_A 327 ---ACLRVLEGHEELVRCIRF--DNK-RIVSGAYDGKIKVWDLVAAL 367 (435)
T ss_dssp ---CEEEEECCCSSCEEEEEC--CSS-EEEEEETTSCEEEEEHHHHT
T ss_pred ---CEEEEEeCCcCcEEEEEe--cCC-EEEEEeCCCcEEEEECCCCC
Confidence 557778899999999999 566 79999999999999997653
No 96
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=4.5e-31 Score=270.38 Aligned_cols=264 Identities=13% Similarity=0.134 Sum_probs=199.5
Q ss_pred cEEEEEEeccCCceeEEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCCeeeEEecCCCCceE
Q 014472 115 KVQIIQQINHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHL 194 (424)
Q Consensus 115 ~~~~~~~~~h~~~v~~i~~~p~~~~~latg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l 194 (424)
.+......+|.+.|++++|+|++. +||+|+.||.|+||+... .... ....|...|.+|+|+| +. +|
T Consensus 7 ~~~~~~~~gh~~~V~~lafspdg~-~lAsgs~Dg~I~lw~~~~----------~~~~-~~~~~~~~V~~l~fsp-g~-~L 72 (902)
T 2oaj_A 7 SLAETNKYGMSSKPIAAAFDFTQN-LLAIATVTGEVHIYGQQQ----------VEVV-IKLEDRSAIKEMRFVK-GI-YL 72 (902)
T ss_dssp EEEEEEEEECSSCEEEEEEETTTT-EEEEEETTSEEEEECSTT----------CEEE-EECSSCCCEEEEEEET-TT-EE
T ss_pred eeccccccCCCCCcEEEEECCCCC-EEEEEeCCCEEEEEeCCC----------cEEE-EEcCCCCCEEEEEEcC-CC-EE
Confidence 355566789999999999999986 899999999999999765 2222 2335788999999999 76 89
Q ss_pred EEEeCCCcEEEEeCCCCCCCCcccceeeeecCCcceeeEEeeCCCCcEEEEEeCCCeEEEEECCCCCCCCCe--------
Q 014472 195 LSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPV-------- 266 (424)
Q Consensus 195 ~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~~s~~~dg~i~i~d~~~~~~~~~~-------- 266 (424)
++++.|++|++||+.++. .+..+. |...|++++|+|++. .+++|+.||.|++||+++.... ..
T Consensus 73 ~S~s~D~~v~lWd~~~~~------~~~~~~-~~~~V~~v~~sp~g~-~l~sgs~dg~V~lwd~~~~~~~-~~~i~~~~~~ 143 (902)
T 2oaj_A 73 VVINAKDTVYVLSLYSQK------VLTTVF-VPGKITSIDTDASLD-WMLIGLQNGSMIVYDIDRDQLS-SFKLDNLQKS 143 (902)
T ss_dssp EEEETTCEEEEEETTTCS------EEEEEE-CSSCEEEEECCTTCS-EEEEEETTSCEEEEETTTTEEE-EEEECCHHHH
T ss_pred EEEECcCeEEEEECCCCc------EEEEEc-CCCCEEEEEECCCCC-EEEEEcCCCcEEEEECCCCccc-cceecccccc
Confidence 999999999999998763 334443 678999999999987 5569999999999999876521 00
Q ss_pred -eEecccCCCeeEEEecCCCCeEEEEEeCCCcEEEEECCCCCCcceeecCC------------------CCCEEEEEEcC
Q 014472 267 -QSVVAHQSEVNCLAFNPFNEWILATGSTDKTVKLFDLRKISTALHTFDSH------------------KEEVFQVGWNP 327 (424)
Q Consensus 267 -~~~~~~~~~v~~i~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~------------------~~~v~~~~~sp 327 (424)
..+.+|...|++++|+|++..+|++|+.||.| +||++. ..++..+..| ...|++++|+|
T Consensus 144 ~~~~~~h~~~V~sl~~sp~~~~~l~~g~~dg~v-lWd~~~-~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fsp 221 (902)
T 2oaj_A 144 SFFPAARLSPIVSIQWNPRDIGTVLISYEYVTL-TYSLVE-NEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHP 221 (902)
T ss_dssp HTCSSSCCCCCCEEEEETTEEEEEEEECSSCEE-EEETTT-TEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECT
T ss_pred ccccccCCCCeEEEEEccCCCCEEEEEeCCCcE-EEECCC-CceEEEEecccCCcCCCcccccccccccCCCeEEEEEcC
Confidence 22356889999999999765689999999999 999998 6677777655 57899999999
Q ss_pred CCCcEEEEEeCCCeEEEeeCCCCCcccC--CCccC-CCCC-eeeEEEcCCCCCcceEEeC----CCCCcEEEEEeCC---
Q 014472 328 KNETILASCCLGRRLMVWDLSRIDEEQT--PEDAE-DGPP-ELLFIHGGHTSKISDFSWN----PCEDWVISSVAED--- 396 (424)
Q Consensus 328 ~~~~~l~s~~~dg~i~iwd~~~~~~~~~--~~~~~-~~~~-~~~~~~~~h~~~v~~~~~~----~~~~~~l~s~~~d--- 396 (424)
++. +|++++.||.|++||++++..... ..... ..+. ........|...|++++|+ |++..+|++|+.|
T Consensus 222 dg~-~lasgs~Dg~i~lWd~~~g~~~~~r~l~~~~~~~~~~~~~~~~~~~~~~V~~v~w~~~~~pd~~~ll~sg~~~~~~ 300 (902)
T 2oaj_A 222 NSL-HIITIHEDNSLVFWDANSGHMIMARTVFETEINVPQPDYIRDSSTNAAKISKVYWMCENNPEYTSLLISHKSISRG 300 (902)
T ss_dssp TSS-EEEEEETTCCEEEEETTTCCEEEEECSSCSCTTSCCTTCCCCCSSCCCEEEEEEEEECSSTTEEEEEEEEECSTTS
T ss_pred CCC-EEEEEECCCeEEEEECCCCcEEEEEeecccccCCCCCcCCCCCccccCCeeEEEEEecCCCCCCEEEEeCCCCCCC
Confidence 985 799999999999999987643210 00000 0000 0000000245579999995 5554578888766
Q ss_pred --CcEEEEec
Q 014472 397 --NILQIWQM 404 (424)
Q Consensus 397 --~~i~iw~~ 404 (424)
+.+++|++
T Consensus 301 ~~~~v~~~~~ 310 (902)
T 2oaj_A 301 DNQSLTMIDL 310 (902)
T ss_dssp SCCCEEEEEE
T ss_pred CCceEEEEec
Confidence 37889985
No 97
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=100.00 E-value=1.9e-30 Score=243.19 Aligned_cols=312 Identities=17% Similarity=0.214 Sum_probs=204.5
Q ss_pred HHHHhHHhcChhHHHHhhhcCCCCCccEEEEcc-CCCCCCCCCCceEEEEEeecCCCCCCCeEEEEEEEcCCCCCCcccC
Q 014472 19 EEYKIWKKNTPFLYDLVITHALEWPSLTVEWLP-DREEPPGKDYSVQKMILGTHTSENEPNYLMLAQVQLPLDDSENDAR 97 (424)
Q Consensus 19 ~~~~~wk~~~~~~y~~~~~~~~~~p~~~~~~~p-~~~~~~~~~~~~~~~~~gt~~~~~~~~~i~i~~~~~~~~~~~~~~~ 97 (424)
...++|..........+..|. -+..+++|.| +. ..++.|+ .+..++++.+.-......
T Consensus 23 ~~~~v~~~~~~~~~~~~~~h~--~~v~~~~~s~~~~----------~~l~~~~-----~dg~i~iw~~~~~~~~~~---- 81 (408)
T 4a11_B 23 STRRVLGLELNKDRDVERIHG--GGINTLDIEPVEG----------RYMLSGG-----SDGVIVLYDLENSSRQSY---- 81 (408)
T ss_dssp HHHHHHTEEECTTEEECCCCS--SCEEEEEECTTTC----------CEEEEEE-----TTSCEEEEECCCCSSSSC----
T ss_pred CcceeeccccCcceeeeeccC--CcEEEEEEecCCC----------CEEEEEc-----CCCeEEEEECCCCcccce----
Confidence 345666554443333443343 3578999999 54 4566665 345688887632110000
Q ss_pred CCCCcCCCCCCCCCCCCcEEEEEE------eccCCceeEEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCc
Q 014472 98 HYDDDRSDFGGFGCANGKVQIIQQ------INHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPD 171 (424)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~------~~h~~~v~~i~~~p~~~~~latg~~dg~v~iwd~~~~~~~~~~~~~~~~~ 171 (424)
........ ..|.+.|.+++|+|++..+|++++.||.|++||+.. ....
T Consensus 82 ----------------~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~----------~~~~ 135 (408)
T 4a11_B 82 ----------------YTCKAVCSIGRDHPDVHRYSVETVQWYPHDTGMFTSSSFDKTLKVWDTNT----------LQTA 135 (408)
T ss_dssp ----------------EEECEEEEECTTCTTCCSSCEEEEEECTTCTTCEEEEETTSEEEEEETTT----------TEEE
T ss_pred ----------------EeccccccccccccccCCCcEEEEEEccCCCcEEEEEeCCCeEEEeeCCC----------Cccc
Confidence 00000111 148999999999996666899999999999999987 3333
Q ss_pred EEEecCCCCeeeEEecCCCCc--eEEEEeCCCcEEEEeCCCCCCCCcccceeeeecCCcceeeEEeeCCCCcEEEEEeCC
Q 014472 172 LRLRGHSTEGYGLSWSKFKEG--HLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDD 249 (424)
Q Consensus 172 ~~~~~h~~~v~~l~~~~~~~~--~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~~s~~~d 249 (424)
..+ .+...+.++.|++.+.. ++++++.||.|++||+.++. .+..+..|...|.+++|+|++.+++++++.|
T Consensus 136 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~------~~~~~~~~~~~v~~~~~~~~~~~ll~~~~~d 208 (408)
T 4a11_B 136 DVF-NFEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGS------CSHILQGHRQEILAVSWSPRYDYILATASAD 208 (408)
T ss_dssp EEE-ECSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSSSC------CCEEECCCCSCEEEEEECSSCTTEEEEEETT
T ss_pred eec-cCCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCcc------eeeeecCCCCcEEEEEECCCCCcEEEEEcCC
Confidence 334 37888999999986432 79999999999999998763 3455677999999999999998888899999
Q ss_pred CeEEEEECCCCCCCCCeeEe---------------cccCCCeeEEEecCCCCeEEEEEeCCCcEEEEECCCCC-------
Q 014472 250 QYLLIWDLRTPSVSKPVQSV---------------VAHQSEVNCLAFNPFNEWILATGSTDKTVKLFDLRKIS------- 307 (424)
Q Consensus 250 g~i~i~d~~~~~~~~~~~~~---------------~~~~~~v~~i~~~~~~~~~l~~g~~dg~i~iwd~~~~~------- 307 (424)
|.|++||++.... ++..+ ..|...|.+++|+|++. +|++++.||.|++||+++..
T Consensus 209 g~i~i~d~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~dg~i~vwd~~~~~~~~~~~~ 285 (408)
T 4a11_B 209 SRVKLWDVRRASG--CLITLDQHNGKKSQAVESANTAHNGKVNGLCFTSDGL-HLLTVGTDNRMRLWNSSNGENTLVNYG 285 (408)
T ss_dssp SCEEEEETTCSSC--CSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECTTSS-EEEEEETTSCEEEEETTTCCBCCCCCC
T ss_pred CcEEEEECCCCCc--ccccccccccccceeeccccccccCceeEEEEcCCCC-EEEEecCCCeEEEEECCCCccceeccc
Confidence 9999999987642 12222 56889999999999988 68999999999999997632
Q ss_pred ---------------------------------------CcceeecCCCCCEEEEEEcCCCCcEEEEEeCCCeEEEeeCC
Q 014472 308 ---------------------------------------TALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLS 348 (424)
Q Consensus 308 ---------------------------------------~~~~~~~~~~~~v~~~~~sp~~~~~l~s~~~dg~i~iwd~~ 348 (424)
.++..+.+|...|++++|+|++. +|++++.||.|++||+.
T Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~v~~~~~s~~~~-~l~s~~~dg~i~iw~~~ 364 (408)
T 4a11_B 286 KVCNNSKKGLKFTVSCGCSSEFVFVPYGSTIAVYTVYSGEQITMLKGHYKTVDCCVFQSNFQ-ELYSGSRDCNILAWVPS 364 (408)
T ss_dssp CCCCCCSSCCCCEECCSSSSCEEEEEETTEEEEEETTTCCEEEEECCCSSCEEEEEEETTTT-EEEEEETTSCEEEEEEC
T ss_pred cccccccccceeEEecCCCceEEEEecCCEEEEEECcCCcceeeeccCCCeEEEEEEcCCCC-EEEEECCCCeEEEEeCC
Confidence 33455677999999999999996 79999999999999998
Q ss_pred CCCcccCCCccCCCCCeeeEEEcCCCCCcceEEeCCCCCcEEEEEeCCCcEEEEecC
Q 014472 349 RIDEEQTPEDAEDGPPELLFIHGGHTSKISDFSWNPCEDWVISSVAEDNILQIWQMA 405 (424)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iw~~~ 405 (424)
..... .....+ .....+.+.....+.+.+.++.+++|+..
T Consensus 365 ~~~~~--------------~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~W~~~ 404 (408)
T 4a11_B 365 LYEPV--------------PDDDET---TTKSQLNPAFEDAWSSSDEEGGTSAWSHP 404 (408)
T ss_dssp C--------------------------------------------------------
T ss_pred CCCcc--------------CCCCce---EeccccccccceeecccCccCceeecCCc
Confidence 75421 111111 12233444444356677889999999865
No 98
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=100.00 E-value=1.3e-30 Score=257.57 Aligned_cols=253 Identities=15% Similarity=0.229 Sum_probs=209.1
Q ss_pred EEeccCCc-eeEEEecC--CCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCCeeeEEecCCCCceEEE
Q 014472 120 QQINHDGE-VNRARYMP--QNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLS 196 (424)
Q Consensus 120 ~~~~h~~~-v~~i~~~p--~~~~~latg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s 196 (424)
....|.+. |++++|+| ++. +||+|+.||.|+||++....... .........+..|...|.+++|+|++. +|++
T Consensus 58 ~~~~h~~~~v~~~~~sp~~~~~-~l~s~~~dg~v~vw~~~~~~~~~--~~~~~~~~~~~~~~~~v~~~~~s~~~~-~l~~ 133 (615)
T 1pgu_A 58 QFTGHGSSVVTTVKFSPIKGSQ-YLCSGDESGKVIVWGWTFDKESN--SVEVNVKSEFQVLAGPISDISWDFEGR-RLCV 133 (615)
T ss_dssp EECTTTTSCEEEEEECSSTTCC-EEEEEETTSEEEEEEEEEEGGGT--EEEEEEEEEEECCSSCEEEEEECTTSS-EEEE
T ss_pred EEecCCCceEEEEEECcCCCCC-EEEEecCCCEEEEEeCCCCcccc--cccccccchhhcccccEEEEEEeCCCC-EEEE
Confidence 34579999 99999999 886 89999999999999996410000 001345667788999999999999988 7888
Q ss_pred EeCC----CcEEEEeCCCCCCCCcccceeeeecCCcceeeEEeeCCCCcEEEEEeCCCeEEEEECCCCCCCCCeeEeccc
Q 014472 197 GSDD----AQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAH 272 (424)
Q Consensus 197 ~~~d----g~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~~s~~~dg~i~i~d~~~~~~~~~~~~~~~~ 272 (424)
++.+ +.|.+||.. ..+..+.+|...|.+++|+|+++.++++++.|+.|++||+++.+. +..+..|
T Consensus 134 ~~~~~~~~~~v~~~d~~--------~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~~---~~~~~~~ 202 (615)
T 1pgu_A 134 VGEGRDNFGVFISWDSG--------NSLGEVSGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPFKF---SASDRTH 202 (615)
T ss_dssp EECCSSCSEEEEETTTC--------CEEEECCSCSSCEEEEEECSSSSCEEEEEETTTEEEEEETTTBEE---EEEECSS
T ss_pred eccCCCCccEEEEEECC--------CcceeeecCCccEEEEEECCCCCcEEEEEeCCCcEEEEeCCCcce---eeeeccc
Confidence 8887 789999832 245667789999999999999987888999999999999988653 6777889
Q ss_pred CC---CeeEEEecCC-CCeEEEEEeCCCcEEEEECCCCCCcceee-c---CCCCCEEEEEEcCCCCcEEEEEeCCCeEEE
Q 014472 273 QS---EVNCLAFNPF-NEWILATGSTDKTVKLFDLRKISTALHTF-D---SHKEEVFQVGWNPKNETILASCCLGRRLMV 344 (424)
Q Consensus 273 ~~---~v~~i~~~~~-~~~~l~~g~~dg~i~iwd~~~~~~~~~~~-~---~~~~~v~~~~~sp~~~~~l~s~~~dg~i~i 344 (424)
.. .|++++|+|+ +. +|++++.||.|++||+++ ++.+..+ . .|...|.+++|+ ++. +|++++.|+.|++
T Consensus 203 ~~~~~~v~~~~~~~~~~~-~l~~~~~dg~i~vwd~~~-~~~~~~~~~~~~~~~~~v~~~~~~-~~~-~l~~~~~d~~i~~ 278 (615)
T 1pgu_A 203 HKQGSFVRDVEFSPDSGE-FVITVGSDRKISCFDGKS-GEFLKYIEDDQEPVQGGIFALSWL-DSQ-KFATVGADATIRV 278 (615)
T ss_dssp SCTTCCEEEEEECSTTCC-EEEEEETTCCEEEEETTT-CCEEEECCBTTBCCCSCEEEEEES-SSS-EEEEEETTSEEEE
T ss_pred CCCCceEEEEEECCCCCC-EEEEEeCCCeEEEEECCC-CCEeEEecccccccCCceEEEEEc-CCC-EEEEEcCCCcEEE
Confidence 88 9999999999 76 699999999999999998 6777777 5 899999999999 775 7999999999999
Q ss_pred eeCCCCCcccCCCccCCCCCeeeEEEcCC----CCCcceEEeCCCCCcEEEEEeCCCcEEEEecCCC
Q 014472 345 WDLSRIDEEQTPEDAEDGPPELLFIHGGH----TSKISDFSWNPCEDWVISSVAEDNILQIWQMAEN 407 (424)
Q Consensus 345 wd~~~~~~~~~~~~~~~~~~~~~~~~~~h----~~~v~~~~~~~~~~~~l~s~~~d~~i~iw~~~~~ 407 (424)
||+.++ +.+..+..+ ...+..+.|. ++. .+++++.||.|++|++.++
T Consensus 279 wd~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~-~~~-~l~~~~~~g~i~~~d~~~~ 329 (615)
T 1pgu_A 279 WDVTTS--------------KCVQKWTLDKQQLGNQQVGVVAT-GNG-RIISLSLDGTLNFYELGHD 329 (615)
T ss_dssp EETTTT--------------EEEEEEECCTTCGGGCEEEEEEE-ETT-EEEEEETTSCEEEEETTEE
T ss_pred EECCCC--------------cEEEEEcCCCCcccCceeEEEeC-CCC-eEEEEECCCCEEEEECCCC
Confidence 999875 445555554 3567788885 777 6899999999999999864
No 99
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.6e-29 Score=240.45 Aligned_cols=249 Identities=15% Similarity=0.132 Sum_probs=196.8
Q ss_pred ccCCceeEEEecCCCCcEEEEEecCCeEEEEeCC--CCCCCCCCCCCCCCcEEEe--cCCCCeeeEEecCCCCceEEEEe
Q 014472 123 NHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYS--KHPSKPPLDGACSPDLRLR--GHSTEGYGLSWSKFKEGHLLSGS 198 (424)
Q Consensus 123 ~h~~~v~~i~~~p~~~~~latg~~dg~v~iwd~~--~~~~~~~~~~~~~~~~~~~--~h~~~v~~l~~~~~~~~~l~s~~ 198 (424)
.|.+.|++++|+|++..++|+|+.||.|+||++. . ......+. .|...|.+++|+|++. +|++|+
T Consensus 100 ~~~~~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~----------~~~~~~~~~~~~~~~v~~~~~sp~~~-~l~~~~ 168 (450)
T 2vdu_B 100 PIYSYIRNLRLTSDESRLIACADSDKSLLVFDVDKTS----------KNVLKLRKRFCFSKRPNAISIAEDDT-TVIIAD 168 (450)
T ss_dssp CCCCCEEEEEECTTSSEEEEEEGGGTEEEEEEECSSS----------SSCEEEEEEEECSSCEEEEEECTTSS-EEEEEE
T ss_pred ccCCceEEEEEcCCCCEEEEEECCCCeEEEEECcCCC----------CceeeeeecccCCCCceEEEEcCCCC-EEEEEe
Confidence 5778999999999998656999999999999998 4 34445554 6778999999999887 799999
Q ss_pred CCCcEEEEeCCCCCCCCcccceeeeecCCcceeeEEeeCC---CCcEEEEEeCCCeEEEEECCCCCCCCCeeE-ecccCC
Q 014472 199 DDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLR---HEYLFGSVGDDQYLLIWDLRTPSVSKPVQS-VVAHQS 274 (424)
Q Consensus 199 ~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~---~~~~~~s~~~dg~i~i~d~~~~~~~~~~~~-~~~~~~ 274 (424)
.+|.|++|++........ ....+.+|...|++++|+|+ +. +|++++.|+.|++||++++.. +.. +.+|..
T Consensus 169 ~~g~v~~~~~~~~~~~~~--~~~~~~~h~~~v~~~~~sp~~~~~~-~l~s~~~d~~i~vwd~~~~~~---~~~~~~~h~~ 242 (450)
T 2vdu_B 169 KFGDVYSIDINSIPEEKF--TQEPILGHVSMLTDVHLIKDSDGHQ-FIITSDRDEHIKISHYPQCFI---VDKWLFGHKH 242 (450)
T ss_dssp TTSEEEEEETTSCCCSSC--CCCCSEECSSCEEEEEEEECTTSCE-EEEEEETTSCEEEEEESCTTC---EEEECCCCSS
T ss_pred CCCcEEEEecCCcccccc--cceeeecccCceEEEEEcCCCCCCc-EEEEEcCCCcEEEEECCCCce---eeeeecCCCC
Confidence 999999999987643220 23356789999999999998 64 667999999999999998664 555 458999
Q ss_pred CeeEEEecCCCCeEEEEEeCCCcEEEEECCCCCCcceeecC-------------------------CCCCEEEEEEcCCC
Q 014472 275 EVNCLAFNPFNEWILATGSTDKTVKLFDLRKISTALHTFDS-------------------------HKEEVFQVGWNPKN 329 (424)
Q Consensus 275 ~v~~i~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~-------------------------~~~~v~~~~~sp~~ 329 (424)
.|++++|+ ++. +|++|+.|+.|++||+++ ++++..+.. ....|.+++|+|++
T Consensus 243 ~v~~~~~s-d~~-~l~s~~~d~~v~vwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~ 319 (450)
T 2vdu_B 243 FVSSICCG-KDY-LLLSAGGDDKIFAWDWKT-GKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSKNL 319 (450)
T ss_dssp CEEEEEEC-STT-EEEEEESSSEEEEEETTT-CCEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEECSSS
T ss_pred ceEEEEEC-CCC-EEEEEeCCCeEEEEECCC-CcEeeeecchhhhhhhhhhcccccccccccccccceEEEEEEEEeCCC
Confidence 99999999 787 699999999999999998 566665542 24579999999999
Q ss_pred CcEEEEEe-CCCeEEEeeC--CCCCcccCCCccCCCCCeeeEEEcCCCCCcceEEeCCCCCcEEEEEeC-------CCcE
Q 014472 330 ETILASCC-LGRRLMVWDL--SRIDEEQTPEDAEDGPPELLFIHGGHTSKISDFSWNPCEDWVISSVAE-------DNIL 399 (424)
Q Consensus 330 ~~~l~s~~-~dg~i~iwd~--~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~-------d~~i 399 (424)
+ +|++++ .|+.|+||++ .... ....+..+.+| ..|.+++|+|++ ++++.+. ++.|
T Consensus 320 ~-~l~~~~~~d~~i~iw~~~~~~~~-----------~l~~~~~~~~~-~~v~~~~~~~~~--~~v~~~~~~~~~~~~~~i 384 (450)
T 2vdu_B 320 P-FVAFFVEATKCIIILEMSEKQKG-----------DLALKQIITFP-YNVISLSAHNDE--FQVTLDNKESSGVQKNFA 384 (450)
T ss_dssp S-EEEEEETTCSEEEEEEECSSSTT-----------CEEEEEEEECS-SCEEEEEEETTE--EEEEECCTTCCSSCCCSE
T ss_pred C-EEEEEECCCCeEEEEEeccCCCC-----------ceeeccEeccC-CceEEEEecCCc--EEEEEecccCCCCCCcce
Confidence 7 566666 8999999999 3221 12455666777 789999999953 4444432 5568
Q ss_pred EEEecCC
Q 014472 400 QIWQMAE 406 (424)
Q Consensus 400 ~iw~~~~ 406 (424)
.+|.+..
T Consensus 385 ~v~~~~~ 391 (450)
T 2vdu_B 385 KFIEYNL 391 (450)
T ss_dssp EEEEEET
T ss_pred EEEEEEc
Confidence 9988753
No 100
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.3e-30 Score=265.16 Aligned_cols=243 Identities=12% Similarity=0.164 Sum_probs=181.1
Q ss_pred CCCccEEEEccCCCCCCCCCCceEEEEEeecCCCCCCCeEEEEEEEcCCCCCCcccCCCCCcCCCCCCCCCCCCcEEEEE
Q 014472 41 EWPSLTVEWLPDREEPPGKDYSVQKMILGTHTSENEPNYLMLAQVQLPLDDSENDARHYDDDRSDFGGFGCANGKVQIIQ 120 (424)
Q Consensus 41 ~~p~~~~~~~p~~~~~~~~~~~~~~~~~gt~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 120 (424)
.-+..+++|.|+. ..++.|+ .+..|+++.. . ..+...
T Consensus 17 ~~~V~~lafspdg----------~~lAsgs-----~Dg~I~lw~~--~--------------------------~~~~~~ 53 (902)
T 2oaj_A 17 SSKPIAAAFDFTQ----------NLLAIAT-----VTGEVHIYGQ--Q--------------------------QVEVVI 53 (902)
T ss_dssp SSCEEEEEEETTT----------TEEEEEE-----TTSEEEEECS--T--------------------------TCEEEE
T ss_pred CCCcEEEEECCCC----------CEEEEEe-----CCCEEEEEeC--C--------------------------CcEEEE
Confidence 3456789999986 4566666 3356777532 1 122344
Q ss_pred EeccCCceeEEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCCeeeEEecCCCCceEEEEeCC
Q 014472 121 QINHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDD 200 (424)
Q Consensus 121 ~~~h~~~v~~i~~~p~~~~~latg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~d 200 (424)
...|...|.+++|+| +. +||+++.|+.|+|||+.+ ......+. |...|++++|+|++. +|++|+.|
T Consensus 54 ~~~~~~~V~~l~fsp-g~-~L~S~s~D~~v~lWd~~~----------~~~~~~~~-~~~~V~~v~~sp~g~-~l~sgs~d 119 (902)
T 2oaj_A 54 KLEDRSAIKEMRFVK-GI-YLVVINAKDTVYVLSLYS----------QKVLTTVF-VPGKITSIDTDASLD-WMLIGLQN 119 (902)
T ss_dssp ECSSCCCEEEEEEET-TT-EEEEEETTCEEEEEETTT----------CSEEEEEE-CSSCEEEEECCTTCS-EEEEEETT
T ss_pred EcCCCCCEEEEEEcC-CC-EEEEEECcCeEEEEECCC----------CcEEEEEc-CCCCEEEEEECCCCC-EEEEEcCC
Confidence 567889999999999 76 899999999999999987 34445554 778999999999887 79999999
Q ss_pred CcEEEEeCCCCCCCCcccc-----e-eeeecCCcceeeEEeeCCCCcEEEEEeCCCeEEEEECCCCCCCCCeeEeccc--
Q 014472 201 AQICLWDINAAPKNKSLEA-----M-QIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAH-- 272 (424)
Q Consensus 201 g~i~vwd~~~~~~~~~~~~-----~-~~~~~~~~~v~~i~~~~~~~~~~~s~~~dg~i~i~d~~~~~~~~~~~~~~~~-- 272 (424)
|.|++||+.++... .+.. . ....+|.+.|++++|+|++..++++|+.||.| +||+++++. +..+..|
T Consensus 120 g~V~lwd~~~~~~~-~~~i~~~~~~~~~~~~h~~~V~sl~~sp~~~~~l~~g~~dg~v-lWd~~~~~~---~~~~~~~~~ 194 (902)
T 2oaj_A 120 GSMIVYDIDRDQLS-SFKLDNLQKSSFFPAARLSPIVSIQWNPRDIGTVLISYEYVTL-TYSLVENEI---KQSFIYELP 194 (902)
T ss_dssp SCEEEEETTTTEEE-EEEECCHHHHHTCSSSCCCCCCEEEEETTEEEEEEEECSSCEE-EEETTTTEE---EEEECCCBC
T ss_pred CcEEEEECCCCccc-cceeccccccccccccCCCCeEEEEEccCCCCEEEEEeCCCcE-EEECCCCce---EEEEecccC
Confidence 99999999875321 0000 0 23467899999999999866678899999999 999998653 4444433
Q ss_pred ----------------CCCeeEEEecCCCCeEEEEEeCCCcEEEEECCCCCCccee--e---cC-------------CCC
Q 014472 273 ----------------QSEVNCLAFNPFNEWILATGSTDKTVKLFDLRKISTALHT--F---DS-------------HKE 318 (424)
Q Consensus 273 ----------------~~~v~~i~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~--~---~~-------------~~~ 318 (424)
...|++++|+|++. +||+|+.||.|++||+++ ++++.. + .. |..
T Consensus 195 ~g~~~~~~~~~~~~~h~~~V~~v~fspdg~-~lasgs~Dg~i~lWd~~~-g~~~~~r~l~~~~~~~~~~~~~~~~~~~~~ 272 (902)
T 2oaj_A 195 PFAPGGDFSEKTNEKRTPKVIQSLYHPNSL-HIITIHEDNSLVFWDANS-GHMIMARTVFETEINVPQPDYIRDSSTNAA 272 (902)
T ss_dssp TTCCCSTTCCCTTSCBCCCEEEEEECTTSS-EEEEEETTCCEEEEETTT-CCEEEEECSSCSCTTSCCTTCCCCCSSCCC
T ss_pred CcCCCcccccccccccCCCeEEEEEcCCCC-EEEEEECCCeEEEEECCC-CcEEEEEeecccccCCCCCcCCCCCccccC
Confidence 57899999999988 699999999999999998 555442 2 11 345
Q ss_pred CEEEEEEc----CCCCcEEEEEeCC-----CeEEEeeC
Q 014472 319 EVFQVGWN----PKNETILASCCLG-----RRLMVWDL 347 (424)
Q Consensus 319 ~v~~~~~s----p~~~~~l~s~~~d-----g~i~iwd~ 347 (424)
+|++++|+ |++..+|++|+.| ..+.+|++
T Consensus 273 ~V~~v~w~~~~~pd~~~ll~sg~~~~~~~~~~v~~~~~ 310 (902)
T 2oaj_A 273 KISKVYWMCENNPEYTSLLISHKSISRGDNQSLTMIDL 310 (902)
T ss_dssp EEEEEEEEECSSTTEEEEEEEEECSTTSSCCCEEEEEE
T ss_pred CeeEEEEEecCCCCCCEEEEeCCCCCCCCCceEEEEec
Confidence 79999995 4444577777665 26777763
No 101
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.2e-30 Score=246.42 Aligned_cols=266 Identities=12% Similarity=0.090 Sum_probs=191.4
Q ss_pred CCceeEEEecCCCCcEEEEEecCCeEEEEeCCCCC---CCC----CCC--------------------------------
Q 014472 125 DGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHP---SKP----PLD-------------------------------- 165 (424)
Q Consensus 125 ~~~v~~i~~~p~~~~~latg~~dg~v~iwd~~~~~---~~~----~~~-------------------------------- 165 (424)
..++.+++|+|++. +|+++ .++.|++||+.+.. ... ...
T Consensus 4 ~~p~~~v~~s~dg~-~l~~~-~~~~i~v~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (450)
T 2vdu_B 4 IHPLQNLLTSRDGS-LVFAI-IKNCILSFKYQSPNHWEFAGKWSDDFDKIQESRNTTAKEQQGQSSENENENKKLKSNKG 81 (450)
T ss_dssp ECCCCEEEECSSSS-EEEEE-ETTEEEEEEEETTTEEEEEEEEECCC---------------------------------
T ss_pred cccEEEEEecCCCC-EEEEE-eCCeEEEEECCCCCcceeeeecCCccccccccccccchhhccccccccccccccccCcC
Confidence 35789999999997 56654 47899999986633 000 000
Q ss_pred --------CCCCCcEEEecCCCCeeeEEecCCCCceEEEEeCCCcEEEEeCC--CCCCCCcccceeeee--cCCcceeeE
Q 014472 166 --------GACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDDAQICLWDIN--AAPKNKSLEAMQIFK--VHEGVVEDV 233 (424)
Q Consensus 166 --------~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~--~~~~~~~~~~~~~~~--~~~~~v~~i 233 (424)
....+.....+|...|.+++|+|++..++++|+.||.|++||+. ++. .+..+. .|...|.++
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~------~~~~~~~~~~~~~v~~~ 155 (450)
T 2vdu_B 82 DSIKRTAAKVPSPGLGAPPIYSYIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKN------VLKLRKRFCFSKRPNAI 155 (450)
T ss_dssp ------------------CCCCCEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSS------CEEEEEEEECSSCEEEE
T ss_pred ccccccCccccCCCCCCCccCCceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCc------eeeeeecccCCCCceEE
Confidence 00001111235666899999999988435899999999999998 542 233333 577899999
Q ss_pred EeeCCCCcEEEEEeCCCeEEEEECCCCCCCC-CeeEecccCCCeeEEEecCC---CCeEEEEEeCCCcEEEEECCCCCCc
Q 014472 234 AWHLRHEYLFGSVGDDQYLLIWDLRTPSVSK-PVQSVVAHQSEVNCLAFNPF---NEWILATGSTDKTVKLFDLRKISTA 309 (424)
Q Consensus 234 ~~~~~~~~~~~s~~~dg~i~i~d~~~~~~~~-~~~~~~~~~~~v~~i~~~~~---~~~~l~~g~~dg~i~iwd~~~~~~~ 309 (424)
+|+|++. .|++++.+|.|++|++.+..... ....+.+|...|++++|+|+ +. +|++|+.|+.|++||+++ +..
T Consensus 156 ~~sp~~~-~l~~~~~~g~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~-~l~s~~~d~~i~vwd~~~-~~~ 232 (450)
T 2vdu_B 156 SIAEDDT-TVIIADKFGDVYSIDINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQ-FIITSDRDEHIKISHYPQ-CFI 232 (450)
T ss_dssp EECTTSS-EEEEEETTSEEEEEETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCE-EEEEEETTSCEEEEEESC-TTC
T ss_pred EEcCCCC-EEEEEeCCCcEEEEecCCcccccccceeeecccCceEEEEEcCCCCCCc-EEEEEcCCCcEEEEECCC-Cce
Confidence 9999987 55689999999999998876543 44466789999999999998 65 799999999999999998 566
Q ss_pred cee-ecCCCCCEEEEEEcCCCCcEEEEEeCCCeEEEeeCCCCCcccCCCccC---------CCCCee--eEEEcCCCCCc
Q 014472 310 LHT-FDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPEDAE---------DGPPEL--LFIHGGHTSKI 377 (424)
Q Consensus 310 ~~~-~~~~~~~v~~~~~sp~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~---------~~~~~~--~~~~~~h~~~v 377 (424)
+.. +.+|...|.+++|+ ++. +|++++.|+.|++||+.++.......... ..++.. ......+...|
T Consensus 233 ~~~~~~~h~~~v~~~~~s-d~~-~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 310 (450)
T 2vdu_B 233 VDKWLFGHKHFVSSICCG-KDY-LLLSAGGDDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAV 310 (450)
T ss_dssp EEEECCCCSSCEEEEEEC-STT-EEEEEESSSEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------CBCCCE
T ss_pred eeeeecCCCCceEEEEEC-CCC-EEEEEeCCCeEEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccccceEEE
Confidence 666 66899999999999 775 79999999999999998864322111000 000000 00000234568
Q ss_pred ceEEeCCCCCcEEEEEe-CCCcEEEEec
Q 014472 378 SDFSWNPCEDWVISSVA-EDNILQIWQM 404 (424)
Q Consensus 378 ~~~~~~~~~~~~l~s~~-~d~~i~iw~~ 404 (424)
.+++|+|++++ |++++ .|+.|+||++
T Consensus 311 ~~i~~~~~~~~-l~~~~~~d~~i~iw~~ 337 (450)
T 2vdu_B 311 SKIIKSKNLPF-VAFFVEATKCIIILEM 337 (450)
T ss_dssp EEEEECSSSSE-EEEEETTCSEEEEEEE
T ss_pred EEEEEeCCCCE-EEEEECCCCeEEEEEe
Confidence 99999999995 66666 8999999999
No 102
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=100.00 E-value=1.3e-29 Score=239.01 Aligned_cols=243 Identities=23% Similarity=0.406 Sum_probs=199.6
Q ss_pred ceeEEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCCeeeEEecCCCCceEEEEeCCCcEEEE
Q 014472 127 EVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDDAQICLW 206 (424)
Q Consensus 127 ~v~~i~~~p~~~~~latg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vw 206 (424)
.++.|+|++++ +||+|. |++|+|||..+ +.......+.+|...|++|+|+|++. +|++|+.||.|++|
T Consensus 107 y~~~l~wS~~n--~lAvgl-d~tV~lWd~~t--------g~~~~~~~~~~~~~~V~sv~fspdg~-~lasgs~Dg~v~iW 174 (420)
T 4gga_A 107 YLNLVDWSSGN--VLAVAL-DNSVYLWSASS--------GDILQLLQMEQPGEYISSVAWIKEGN-YLAVGTSSAEVQLW 174 (420)
T ss_dssp TCBCEEECTTS--EEEEEE-TTEEEEEETTT--------CCEEEEEECCSTTCCEEEEEECTTSS-EEEEEETTSCEEEE
T ss_pred cceeEEECCCC--EEEEEe-CCEEEEEECCC--------CCEEEEEEecCCCCcEEEEEECCCCC-EEEEEECCCeEEEE
Confidence 46789999854 788876 89999999987 33333444557888999999999987 89999999999999
Q ss_pred eCCCCCCCCcccceeeeecCCcceeeEEeeCCCCcEEEEEeCCCeEEEEECCCCCCCCCeeEecccCCCeeEEEecCCCC
Q 014472 207 DINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNE 286 (424)
Q Consensus 207 d~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~ 286 (424)
|+.++ +.+..+.+|...+.++++++ .++++|+.|+.+++||.+.... .+..+.+|...+..+.|+|++.
T Consensus 175 d~~~~------~~~~~~~~h~~~v~~~s~~~---~~l~sgs~d~~i~~~d~~~~~~--~~~~~~~h~~~~~~~~~~~~g~ 243 (420)
T 4gga_A 175 DVQQQ------KRLRNMTSHSARVGSLSWNS---YILSSGSRSGHIHHHDVRVAEH--HVATLSGHSQEVCGLRWAPDGR 243 (420)
T ss_dssp ETTTT------EEEEEECCCSSCEEEEEEET---TEEEEEETTSEEEEEETTSSSC--EEEEEECCSSCEEEEEECTTSS
T ss_pred EcCCC------cEEEEEeCCCCceEEEeeCC---CEEEEEeCCCceeEeeecccce--eeEEecccccceeeeeecCCCC
Confidence 99876 45677888999999998864 4778999999999999987553 4667789999999999999998
Q ss_pred eEEEEEeCCCcEEEEECCCCC---CcceeecCCCCCEEEEEEcCCCCcEEEEE--eCCCeEEEeeCCCCCcccCCCccCC
Q 014472 287 WILATGSTDKTVKLFDLRKIS---TALHTFDSHKEEVFQVGWNPKNETILASC--CLGRRLMVWDLSRIDEEQTPEDAED 361 (424)
Q Consensus 287 ~~l~~g~~dg~i~iwd~~~~~---~~~~~~~~~~~~v~~~~~sp~~~~~l~s~--~~dg~i~iwd~~~~~~~~~~~~~~~ 361 (424)
++++++.|+.+++||.+... ..+.....|...|.+++|+|.+..+++++ +.|++|++||+.++
T Consensus 244 -~l~s~~~D~~v~i~~~~~~~~~~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t~----------- 311 (420)
T 4gga_A 244 -HLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSG----------- 311 (420)
T ss_dssp -EEEEEETTSCEEEEESSCCSSCSCCSEEECCCSSCEEEEEECTTCTTEEEEEECTTTCEEEEEETTTT-----------
T ss_pred -eeeeeeccccceEEeeccccccceeeeeecccCCceeeeeeCCCcccEEEEEeecCCCEEEEEeCCcc-----------
Confidence 69999999999999998633 24667788999999999999988888765 47999999999875
Q ss_pred CCCeeeEEEcCCCCCcceEEeCCCCCcEEEEEe-CCCcEEEEecCCCC
Q 014472 362 GPPELLFIHGGHTSKISDFSWNPCEDWVISSVA-EDNILQIWQMAENI 408 (424)
Q Consensus 362 ~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~-~d~~i~iw~~~~~~ 408 (424)
.++..+..| ..+.++.|+|++..++++++ .|+.|+|||+.++.
T Consensus 312 ---~~~~~~~~~-~~v~~~~~~~~~~~lv~~sg~~d~~I~iwd~~~~~ 355 (420)
T 4gga_A 312 ---ACLSAVDAH-SQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMA 355 (420)
T ss_dssp ---EEEEEEECS-SCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCC
T ss_pred ---ccceeeccc-cceeeeeecCCCCeEEEEEecCCCEEEEEECCCCc
Confidence 445555544 46899999999996544433 79999999998764
No 103
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=99.98 E-value=2.5e-30 Score=236.37 Aligned_cols=220 Identities=25% Similarity=0.358 Sum_probs=187.6
Q ss_pred CCCcEEEecCCCCeeeEEecCCCCceEEEEeCCCcEEEEeCCCCCCCCcccceeeeecCCcceeeEEeeCCCCcEEEEEe
Q 014472 168 CSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVG 247 (424)
Q Consensus 168 ~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~~s~~ 247 (424)
.....+|.+|.+.|++|+|+|++..+|+||+.||+|+|||+........ .+...+.+|...|.+++|+|++. ++++++
T Consensus 28 ~~l~~tL~GH~~~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~~~-~~~~~l~~h~~~V~~~~~s~dg~-~l~s~~ 105 (340)
T 4aow_A 28 MTLRGTLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYG-IPQRALRGHSHFVSDVVISSDGQ-FALSGS 105 (340)
T ss_dssp EEEEEEECCCSSCEEEEEECTTCTTEEEEEETTSCEEEEEECCSSSCSE-EEEEEECCCSSCEEEEEECTTSS-EEEEEE
T ss_pred eEEEEEECCccCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCcccc-eeeEEEeCCCCCEEEEEECCCCC-EEEEEc
Confidence 3445578999999999999998666899999999999999987654322 34566788999999999999987 567999
Q ss_pred CCCeEEEEECCCCCCCCCeeEecccCCCeeEEEecCCCCeEEEEEeCCCcEEEEECCCCCCcceeecCCCCCEEEEEEcC
Q 014472 248 DDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATGSTDKTVKLFDLRKISTALHTFDSHKEEVFQVGWNP 327 (424)
Q Consensus 248 ~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~sp 327 (424)
.|+.|++|+...... ......+...+..+.+++.+. +|++|+.|+.+++||++...........|...+..++|++
T Consensus 106 ~d~~i~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~-~l~s~s~d~~~~~~d~~~~~~~~~~~~~~~~~v~~~~~~~ 181 (340)
T 4aow_A 106 WDGTLRLWDLTTGTT---TRRFVGHTKDVLSVAFSSDNR-QIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSP 181 (340)
T ss_dssp TTSEEEEEETTTTEE---EEEEECCSSCEEEEEECTTSS-CEEEEETTSCEEEECTTSCEEEEECSSSCSSCEEEEEECS
T ss_pred ccccceEEeecccce---eeeecCCCCceeEEEEeecCc-cceeecCCCeEEEEEeCCCceEEEEeccccCcccceEEcc
Confidence 999999999987553 555567788899999999887 5899999999999999875555666778999999999998
Q ss_pred CCC-cEEEEEeCCCeEEEeeCCCCCcccCCCccCCCCCeeeEEEcCCCCCcceEEeCCCCCcEEEEEeCCCcEEEEecCC
Q 014472 328 KNE-TILASCCLGRRLMVWDLSRIDEEQTPEDAEDGPPELLFIHGGHTSKISDFSWNPCEDWVISSVAEDNILQIWQMAE 406 (424)
Q Consensus 328 ~~~-~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iw~~~~ 406 (424)
++. .++++++.|+.|++||++.. +++..+.+|...|++++|+|+++ +|++++.|+.|++||+.+
T Consensus 182 ~~~~~~~~s~~~d~~i~i~d~~~~--------------~~~~~~~~h~~~v~~~~~s~~~~-~l~s~s~Dg~i~iwd~~~ 246 (340)
T 4aow_A 182 NSSNPIIVSCGWDKLVKVWNLANC--------------KLKTNHIGHTGYLNTVTVSPDGS-LCASGGKDGQAMLWDLNE 246 (340)
T ss_dssp CSSSCEEEEEETTSCEEEEETTTT--------------EEEEEECCCSSCEEEEEECTTSS-EEEEEETTCEEEEEETTT
T ss_pred CCCCcEEEEEcCCCEEEEEECCCC--------------ceeeEecCCCCcEEEEEECCCCC-EEEEEeCCCeEEEEEecc
Confidence 753 46789999999999999874 66778889999999999999999 799999999999999987
Q ss_pred CC
Q 014472 407 NI 408 (424)
Q Consensus 407 ~~ 408 (424)
..
T Consensus 247 ~~ 248 (340)
T 4aow_A 247 GK 248 (340)
T ss_dssp TE
T ss_pred Cc
Confidence 63
No 104
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.98 E-value=9.3e-31 Score=240.01 Aligned_cols=237 Identities=9% Similarity=0.044 Sum_probs=177.1
Q ss_pred cCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCCeeeEEecCCCCceEEEEeCCCcEEEEeCCCCCC
Q 014472 134 MPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPK 213 (424)
Q Consensus 134 ~p~~~~~latg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~ 213 (424)
.+++ .+||+|+.||.|++||+.. ......+. ...|.++.|+|. +++++.|++|++|+......
T Consensus 45 ~~d~-~~l~sg~~Dg~v~iwd~~~----------~~~~~~~~--~~~v~~~~~~~~----~~s~s~D~~i~~w~~~~~~~ 107 (343)
T 3lrv_A 45 YYDK-WVCMCRCEDGALHFTQLKD----------SKTITTIT--TPNPRTGGEHPA----IISRGPCNRLLLLYPGNQIT 107 (343)
T ss_dssp SEEE-EEEEEEEETTEEEEEEESS----------SSCEEEEE--EECCCTTCCCCS----EEEECSTTEEEEEETTTEEE
T ss_pred cCCC-CEEEEECCCCcEEEEECCC----------CcEEEEEe--cCCceeeeeCCc----eEEecCCCeEEEEEccCceE
Confidence 3444 4899999999999999987 34444444 456888999885 99999999999998764210
Q ss_pred C---Ccccceeee-ecCCcceeeEEeeC--CCCcEEEEEeCCCeEEEEECCCCCCCCCeeEe-cccCCCeeEEEecCCCC
Q 014472 214 N---KSLEAMQIF-KVHEGVVEDVAWHL--RHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSV-VAHQSEVNCLAFNPFNE 286 (424)
Q Consensus 214 ~---~~~~~~~~~-~~~~~~v~~i~~~~--~~~~~~~s~~~dg~i~i~d~~~~~~~~~~~~~-~~~~~~v~~i~~~~~~~ 286 (424)
. .....+... ..|...|.+++|+| ++. ++++++.||.|++||+++++. +... ..+...+++++|+|++.
T Consensus 108 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~-~l~s~s~dg~i~~wd~~~~~~---~~~~~~~~~~~i~~~~~~pdg~ 183 (343)
T 3lrv_A 108 ILDSKTNKVLREIEVDSANEIIYMYGHNEVNTE-YFIWADNRGTIGFQSYEDDSQ---YIVHSAKSDVEYSSGVLHKDSL 183 (343)
T ss_dssp EEETTTCCEEEEEECCCSSCEEEEECCC---CC-EEEEEETTCCEEEEESSSSCE---EEEECCCSSCCCCEEEECTTSC
T ss_pred EeecCCcceeEEeecCCCCCEEEEEcCCCCCCC-EEEEEeCCCcEEEEECCCCcE---EEEEecCCCCceEEEEECCCCC
Confidence 0 011112222 25668899999999 876 567999999999999998664 4333 34566899999999998
Q ss_pred eEEEEEeCCCcEEEEECCCCCCcc-eeecC-CCCCEEEEEEcCCCCcEEEEEeCCCeEEEeeCCCCCcccCCCccCCCCC
Q 014472 287 WILATGSTDKTVKLFDLRKISTAL-HTFDS-HKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPEDAEDGPP 364 (424)
Q Consensus 287 ~~l~~g~~dg~i~iwd~~~~~~~~-~~~~~-~~~~v~~~~~sp~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~ 364 (424)
+|++|+.||.|++||+++. ..+ ..+.. |..+|++++|+|++. +|++++ |+.|++||++........
T Consensus 184 -~lasg~~dg~i~iwd~~~~-~~~~~~~~~~h~~~v~~l~fs~~g~-~l~s~~-~~~v~iwd~~~~~~~~~~-------- 251 (343)
T 3lrv_A 184 -LLALYSPDGILDVYNLSSP-DQASSRFPVDEEAKIKEVKFADNGY-WMVVEC-DQTVVCFDLRKDVGTLAY-------- 251 (343)
T ss_dssp -EEEEECTTSCEEEEESSCT-TSCCEECCCCTTSCEEEEEECTTSS-EEEEEE-SSBEEEEETTSSTTCBSS--------
T ss_pred -EEEEEcCCCEEEEEECCCC-CCCccEEeccCCCCEEEEEEeCCCC-EEEEEe-CCeEEEEEcCCCCcceee--------
Confidence 7999999999999999984 444 77887 999999999999996 788888 559999999986543221
Q ss_pred eeeEEEcCCCCCcc--eEEeCCCCCcEEEEEeC-CCcEEEEecCCC
Q 014472 365 ELLFIHGGHTSKIS--DFSWNPCEDWVISSVAE-DNILQIWQMAEN 407 (424)
Q Consensus 365 ~~~~~~~~h~~~v~--~~~~~~~~~~~l~s~~~-d~~i~iw~~~~~ 407 (424)
..+..|...+. +++|+|+++ +|++++. |+.|+||++...
T Consensus 252 ---~~~~~~~~~~~~~~~~~~~~g~-~l~~~s~~d~~i~v~~~~~~ 293 (343)
T 3lrv_A 252 ---PTYTIPEFKTGTVTYDIDDSGK-NMIAYSNESNSLTIYKFDKK 293 (343)
T ss_dssp ---CCCBC-----CCEEEEECTTSS-EEEEEETTTTEEEEEEECTT
T ss_pred ---cccccccccccceEEEECCCCC-EEEEecCCCCcEEEEEEccc
Confidence 11122333444 599999999 5777777 999999999654
No 105
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=99.98 E-value=6.7e-30 Score=236.98 Aligned_cols=251 Identities=16% Similarity=0.240 Sum_probs=196.8
Q ss_pred CccEEEEccCCCCCCCCCCceEEEEEeecCCCCCCCeEEEEEEEcCCCCCCcccCCCCCcCCCCCCCCCCCCcEEEE-EE
Q 014472 43 PSLTVEWLPDREEPPGKDYSVQKMILGTHTSENEPNYLMLAQVQLPLDDSENDARHYDDDRSDFGGFGCANGKVQII-QQ 121 (424)
Q Consensus 43 p~~~~~~~p~~~~~~~~~~~~~~~~~gt~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 121 (424)
+..++.|.|+. ..++.|+ .+..|+++.+.-. ..+.. ..
T Consensus 13 ~v~~~~~s~~~----------~~l~~~~-----~dg~i~iw~~~~~--------------------------~~~~~~~~ 51 (379)
T 3jrp_A 13 LIHDAVLDYYG----------KRLATCS-----SDKTIKIFEVEGE--------------------------THKLIDTL 51 (379)
T ss_dssp CEEEEEECSSS----------SEEEEEE-----TTSCEEEEEEETT--------------------------EEEEEEEE
T ss_pred cEEEEEEcCCC----------CEEEEEE-----CCCcEEEEecCCC--------------------------cceeeeEe
Confidence 46788999875 4566665 3456888887411 12222 33
Q ss_pred eccCCceeEEEecCC--CCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCCeeeEEecCC--CCceEEEE
Q 014472 122 INHDGEVNRARYMPQ--NPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKF--KEGHLLSG 197 (424)
Q Consensus 122 ~~h~~~v~~i~~~p~--~~~~latg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~--~~~~l~s~ 197 (424)
..|.+.|++++|+|+ +. +|++|+.||.|++||+.. ........+..|...|.+++|+|+ +. +|+++
T Consensus 52 ~~h~~~v~~~~~~~~~~~~-~l~s~~~dg~v~iwd~~~--------~~~~~~~~~~~~~~~v~~~~~~~~~~~~-~l~~~ 121 (379)
T 3jrp_A 52 TGHEGPVWRVDWAHPKFGT-ILASCSYDGKVLIWKEEN--------GRWSQIAVHAVHSASVNSVQWAPHEYGP-LLLVA 121 (379)
T ss_dssp CCCSSCEEEEEECCGGGCS-EEEEEETTSCEEEEEEET--------TEEEEEEEECCCSSCEEEEEECCGGGCS-EEEEE
T ss_pred cCCCCcEEEEEeCCCCCCC-EEEEeccCCEEEEEEcCC--------CceeEeeeecCCCcceEEEEeCCCCCCC-EEEEe
Confidence 469999999999876 54 899999999999999987 223356777889999999999998 65 89999
Q ss_pred eCCCcEEEEeCCCCCCCCcccceeeeecCCcceeeEEeeCC------------CCcEEEEEeCCCeEEEEECCCCCCC-C
Q 014472 198 SDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLR------------HEYLFGSVGDDQYLLIWDLRTPSVS-K 264 (424)
Q Consensus 198 ~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~------------~~~~~~s~~~dg~i~i~d~~~~~~~-~ 264 (424)
+.||.|++||+...... ....+..|...|.+++|+|. ...++++++.||.|++||++..... .
T Consensus 122 ~~d~~i~v~d~~~~~~~----~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~ 197 (379)
T 3jrp_A 122 SSDGKVSVVEFKENGTT----SPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYV 197 (379)
T ss_dssp ETTSEEEEEECCTTSCC----CEEEEECCTTCEEEEEECCCC----------CTTCEEEEEETTSCEEEEEEETTTTEEE
T ss_pred cCCCcEEEEecCCCCce----eeEEecCCCCceEEEEEcCccccccccccCCCCCCEEEEEeCCCeEEEEEecCCCccee
Confidence 99999999999876432 23346679999999999994 2346789999999999999876531 2
Q ss_pred CeeEecccCCCeeEEEecCCC--CeEEEEEeCCCcEEEEECCCCCC----cceeecCCCCCEEEEEEcCCCCcEEEEEeC
Q 014472 265 PVQSVVAHQSEVNCLAFNPFN--EWILATGSTDKTVKLFDLRKIST----ALHTFDSHKEEVFQVGWNPKNETILASCCL 338 (424)
Q Consensus 265 ~~~~~~~~~~~v~~i~~~~~~--~~~l~~g~~dg~i~iwd~~~~~~----~~~~~~~~~~~v~~~~~sp~~~~~l~s~~~ 338 (424)
....+..|...|++++|+|++ ..+|++++.||.|++||++.... .+.....|...|++++|+|++. +|++++.
T Consensus 198 ~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~-~l~~~~~ 276 (379)
T 3jrp_A 198 LESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGN-VLALSGG 276 (379)
T ss_dssp EEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSC-CEEEEES
T ss_pred eEEEEecccCcEeEEEECCCCCCCCeEEEEeCCCEEEEEeCCCCCccceeeeeccccCCCcEEEEEEcCCCC-EEEEecC
Confidence 345667899999999999993 34799999999999999997432 2222334888999999999996 6889999
Q ss_pred CCeEEEeeCCC
Q 014472 339 GRRLMVWDLSR 349 (424)
Q Consensus 339 dg~i~iwd~~~ 349 (424)
||.|++|++..
T Consensus 277 dg~i~iw~~~~ 287 (379)
T 3jrp_A 277 DNKVTLWKENL 287 (379)
T ss_dssp SSSEEEEEEEE
T ss_pred CCcEEEEeCCC
Confidence 99999999974
No 106
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=99.98 E-value=2e-29 Score=239.53 Aligned_cols=236 Identities=20% Similarity=0.381 Sum_probs=201.3
Q ss_pred eccCCceeEEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCCeeeEEecCCCCceEEEEeCCC
Q 014472 122 INHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDDA 201 (424)
Q Consensus 122 ~~h~~~v~~i~~~p~~~~~latg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg 201 (424)
.+|.+.|.+++|++ .++++|+.||.|++||+.+ ......+.+|...|.+++|++ . .|++|+.||
T Consensus 156 ~~h~~~v~~~~~~~---~~l~s~~~dg~i~vwd~~~----------~~~~~~~~~h~~~v~~~~~~~--~-~l~s~s~dg 219 (445)
T 2ovr_B 156 VGHTGGVWSSQMRD---NIIISGSTDRTLKVWNAET----------GECIHTLYGHTSTVRCMHLHE--K-RVVSGSRDA 219 (445)
T ss_dssp CCCSSCEEEEEEET---TEEEEEETTSCEEEEETTT----------TEEEEEECCCSSCEEEEEEET--T-EEEEEETTS
T ss_pred cCCCCCEEEEEecC---CEEEEEeCCCeEEEEECCc----------CcEEEEECCCCCcEEEEEecC--C-EEEEEeCCC
Confidence 46999999999984 3899999999999999987 455678889999999999963 3 699999999
Q ss_pred cEEEEeCCCCCCCCcccceeeeecCCcceeeEEeeCCCCcEEEEEeCCCeEEEEECCCCCCCCCeeEecccCCCeeEEEe
Q 014472 202 QICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAF 281 (424)
Q Consensus 202 ~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~ 281 (424)
.|++||+.++ +.+..+.+|...|.+++| ++. .+++|+.||.|++||++++. .+..+..|...|.+++|
T Consensus 220 ~i~~wd~~~~------~~~~~~~~~~~~v~~~~~--~~~-~l~~~~~dg~i~iwd~~~~~---~~~~~~~~~~~v~~~~~ 287 (445)
T 2ovr_B 220 TLRVWDIETG------QCLHVLMGHVAAVRCVQY--DGR-RVVSGAYDFMVKVWDPETET---CLHTLQGHTNRVYSLQF 287 (445)
T ss_dssp EEEEEESSSC------CEEEEEECCSSCEEEEEE--CSS-CEEEEETTSCEEEEEGGGTE---EEEEECCCSSCEEEEEE
T ss_pred EEEEEECCCC------cEEEEEcCCcccEEEEEE--CCC-EEEEEcCCCEEEEEECCCCc---EeEEecCCCCceEEEEE
Confidence 9999999876 345667789999999999 444 56799999999999999865 37778889999999999
Q ss_pred cCCCCeEEEEEeCCCcEEEEECCCCCCcceeecCCCCCEEEEEEcCCCCcEEEEEeCCCeEEEeeCCCCCcccCCCccCC
Q 014472 282 NPFNEWILATGSTDKTVKLFDLRKISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPEDAED 361 (424)
Q Consensus 282 ~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~ 361 (424)
++. .+++|+.||.|++||+++ +.++..+..|...+.++.+++ .+|++++.||.|++||++++
T Consensus 288 --~~~-~l~~~~~d~~i~i~d~~~-~~~~~~~~~~~~~v~~~~~~~---~~l~~~~~dg~i~vwd~~~~----------- 349 (445)
T 2ovr_B 288 --DGI-HVVSGSLDTSIRVWDVET-GNCIHTLTGHQSLTSGMELKD---NILVSGNADSTVKIWDIKTG----------- 349 (445)
T ss_dssp --CSS-EEEEEETTSCEEEEETTT-CCEEEEECCCCSCEEEEEEET---TEEEEEETTSCEEEEETTTC-----------
T ss_pred --CCC-EEEEEeCCCeEEEEECCC-CCEEEEEcCCcccEEEEEEeC---CEEEEEeCCCeEEEEECCCC-----------
Confidence 455 699999999999999998 788899999999999998863 37999999999999999875
Q ss_pred CCCeeeEEEcC---CCCCcceEEeCCCCCcEEEEEeCCCcEEEEecCCCCC
Q 014472 362 GPPELLFIHGG---HTSKISDFSWNPCEDWVISSVAEDNILQIWQMAENIY 409 (424)
Q Consensus 362 ~~~~~~~~~~~---h~~~v~~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~ 409 (424)
+.+..+.+ |...|++++|+ +. +|++++.||.|++|++.++..
T Consensus 350 ---~~~~~~~~~~~~~~~v~~~~~~--~~-~l~s~~~dg~v~iwd~~~~~~ 394 (445)
T 2ovr_B 350 ---QCLQTLQGPNKHQSAVTCLQFN--KN-FVITSSDDGTVKLWDLKTGEF 394 (445)
T ss_dssp ---CEEEEECSTTSCSSCEEEEEEC--SS-EEEEEETTSEEEEEETTTCCE
T ss_pred ---cEEEEEccCCCCCCCEEEEEEC--CC-EEEEEeCCCeEEEEECCCCce
Confidence 34555554 88899999996 45 799999999999999988743
No 107
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=99.98 E-value=1.5e-29 Score=231.51 Aligned_cols=265 Identities=14% Similarity=0.175 Sum_probs=202.3
Q ss_pred CccEEEEccCCCCCCCCCCceEEEEEeecCCCCCCCeEEEEEEEcCCCCCCcccCCCCCcCCCCCCCCCCCCcEEEEE-E
Q 014472 43 PSLTVEWLPDREEPPGKDYSVQKMILGTHTSENEPNYLMLAQVQLPLDDSENDARHYDDDRSDFGGFGCANGKVQIIQ-Q 121 (424)
Q Consensus 43 p~~~~~~~p~~~~~~~~~~~~~~~~~gt~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 121 (424)
+..+++|.|+. ..++.|+ .+..++++.+.-. ....+... .
T Consensus 13 ~v~~~~~~~~~----------~~l~~~~-----~dg~i~iw~~~~~------------------------~~~~~~~~~~ 53 (351)
T 3f3f_A 13 LVHDVVYDFYG----------RHVATCS-----SDQHIKVFKLDKD------------------------TSNWELSDSW 53 (351)
T ss_dssp CEEEEEECSSS----------SEEEEEE-----TTSEEEEEEECSS------------------------SCCEEEEEEE
T ss_pred ceeEEEEcCCC----------CEEEEee-----CCCeEEEEECCCC------------------------CCcceeccee
Confidence 47789999965 4566655 4467888887311 11223333 3
Q ss_pred eccCCceeEEEecCC--CCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCCeeeEEecCC--CCceEEEE
Q 014472 122 INHDGEVNRARYMPQ--NPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKF--KEGHLLSG 197 (424)
Q Consensus 122 ~~h~~~v~~i~~~p~--~~~~latg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~--~~~~l~s~ 197 (424)
..|.+.|++++|+|. +. +|++|+.||.|++||+........ .........+.+|...|.+++|+|+ +. +|+++
T Consensus 54 ~~~~~~v~~~~~~~~~d~~-~l~s~~~dg~v~vwd~~~~~~~~~-~~~~~~~~~~~~~~~~v~~~~~~~~~~~~-~l~~~ 130 (351)
T 3f3f_A 54 RAHDSSIVAIDWASPEYGR-IIASASYDKTVKLWEEDPDQEECS-GRRWNKLCTLNDSKGSLYSVKFAPAHLGL-KLACL 130 (351)
T ss_dssp ECCSSCEEEEEECCGGGCS-EEEEEETTSCEEEEEECTTSCTTS-SCSEEEEEEECCCSSCEEEEEECCGGGCS-EEEEE
T ss_pred ccCCCcEEEEEEcCCCCCC-EEEEEcCCCeEEEEecCCCccccc-ccCcceeeeecccCCceeEEEEcCCCCCc-EEEEe
Confidence 469999999999994 54 899999999999999987321110 0111446677889999999999998 66 79999
Q ss_pred eCCCcEEEEeCCCCCCCCcccceee-------eecCCcceeeEEeeCC--CCcEEEEEeCCCeEEEEECCCCCCCCCeeE
Q 014472 198 SDDAQICLWDINAAPKNKSLEAMQI-------FKVHEGVVEDVAWHLR--HEYLFGSVGDDQYLLIWDLRTPSVSKPVQS 268 (424)
Q Consensus 198 ~~dg~i~vwd~~~~~~~~~~~~~~~-------~~~~~~~v~~i~~~~~--~~~~~~s~~~dg~i~i~d~~~~~~~~~~~~ 268 (424)
+.||.|++||++++.....+..... ...|...+.+++|+|+ ...++++++.++.+.+|+..... ...+..
T Consensus 131 ~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~ 209 (351)
T 3f3f_A 131 GNDGILRLYDALEPSDLRSWTLTSEMKVLSIPPANHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGK-LHVAAK 209 (351)
T ss_dssp ETTCEEEEEECSSTTCTTCCEEEEEEESCSCCCSSCSCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTSC-EEEEEE
T ss_pred cCCCcEEEecCCChHHhccccccccccccccccCCcccceeEEEeccCCCCCcEEEEecCCCcEEEEccCCCc-eeeeee
Confidence 9999999999988765443321111 1257789999999997 34577899999999888776654 234566
Q ss_pred ecccCCCeeEEEecCCCC---eEEEEEeCCCcEEEEECCCCC--------------------------------------
Q 014472 269 VVAHQSEVNCLAFNPFNE---WILATGSTDKTVKLFDLRKIS-------------------------------------- 307 (424)
Q Consensus 269 ~~~~~~~v~~i~~~~~~~---~~l~~g~~dg~i~iwd~~~~~-------------------------------------- 307 (424)
+.+|...|++++|+|++. .+|++|+.||.|++||++...
T Consensus 210 ~~~h~~~i~~~~~~p~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (351)
T 3f3f_A 210 LPGHKSLIRSISWAPSIGRWYQLIATGCKDGRIRIFKITEKLSPLASEESLTNSNMFDNSADVDMDAQGRSDSNTEEKAE 289 (351)
T ss_dssp CCCCCSCEEEEEECCCSSCSSEEEEEEETTSCEEEEEEEECC--------------------------------------
T ss_pred cCCCCcceeEEEECCCCCCcceEEEEEcCCCeEEEEeCCCCcCccccCCcccceeccCCCcccccccccccccccceeee
Confidence 778999999999999973 479999999999999998621
Q ss_pred -------CcceeecCCCCCEEEEEEcCCCCcEEEEEeCCCeEEEeeCCCCC
Q 014472 308 -------TALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRID 351 (424)
Q Consensus 308 -------~~~~~~~~~~~~v~~~~~sp~~~~~l~s~~~dg~i~iwd~~~~~ 351 (424)
.++..+.+|...|++++|+|+++ +|++++.||.|+||++....
T Consensus 290 ~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~-~l~s~~~dg~v~iw~~~~~~ 339 (351)
T 3f3f_A 290 LQSNLQVELLSEHDDHNGEVWSVSWNLTGT-ILSSAGDDGKVRLWKATYSN 339 (351)
T ss_dssp -CCSEEEEEEEEECTTSSCEEEEEECSSSC-CEEEEETTSCEEEEEECTTS
T ss_pred ecccccccEEEEEecccccEEEEEEcCCCC-EEEEecCCCcEEEEecCcCc
Confidence 45667788999999999999996 79999999999999998754
No 108
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=99.98 E-value=3.7e-30 Score=258.11 Aligned_cols=216 Identities=24% Similarity=0.339 Sum_probs=183.8
Q ss_pred cEEEecCCCCeeeEEecCCCCceEEEEeCCCcEEEEeCCCCCCCCcccceeeeecCCcceeeEEeeCCCCcEEEEEeCCC
Q 014472 171 DLRLRGHSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQ 250 (424)
Q Consensus 171 ~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~~s~~~dg 250 (424)
...+.+|.+.|++|+|+|++..+|++|+.||+|++|++........ .....+.+|...|.+++|+|++. ++++|+.||
T Consensus 375 ~~~l~~H~~~V~~v~~~~~~~~~l~s~s~D~~i~~W~~~~~~~~~~-~~~~~~~~h~~~v~~v~~s~~g~-~l~sgs~Dg 452 (694)
T 3dm0_A 375 KGTMRAHTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYG-VAQRRLTGHSHFVEDVVLSSDGQ-FALSGSWDG 452 (694)
T ss_dssp EEEEECCSSCEEEEECCTTCCSEEEEEETTSEEEEEECCCSTTCSC-EEEEEEECCSSCEEEEEECTTSS-EEEEEETTS
T ss_pred hhhcccCCceeEEEEecCCCCCEEEEEeCCCcEEEEEccCCCcccc-cccceecCCCCcEEEEEECCCCC-EEEEEeCCC
Confidence 3468899999999999998777899999999999999976543211 23456788999999999999986 567999999
Q ss_pred eEEEEECCCCCCCCCeeEecccCCCeeEEEecCCCCeEEEEEeCCCcEEEEECCCCCCccee---ecCCCCCEEEEEEcC
Q 014472 251 YLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATGSTDKTVKLFDLRKISTALHT---FDSHKEEVFQVGWNP 327 (424)
Q Consensus 251 ~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~---~~~~~~~v~~~~~sp 327 (424)
+|+|||++++.. +..+.+|...|.+++|+|++. +|++|+.|++|++||++. ...... ..+|...|.+++|+|
T Consensus 453 ~v~vwd~~~~~~---~~~~~~h~~~v~~~~~s~~~~-~l~s~s~D~~i~iwd~~~-~~~~~~~~~~~~h~~~v~~~~~~~ 527 (694)
T 3dm0_A 453 ELRLWDLAAGVS---TRRFVGHTKDVLSVAFSLDNR-QIVSASRDRTIKLWNTLG-ECKYTISEGGEGHRDWVSCVRFSP 527 (694)
T ss_dssp EEEEEETTTTEE---EEEEECCSSCEEEEEECTTSS-CEEEEETTSCEEEECTTS-CEEEEECSSTTSCSSCEEEEEECS
T ss_pred cEEEEECCCCcc---eeEEeCCCCCEEEEEEeCCCC-EEEEEeCCCEEEEEECCC-CcceeeccCCCCCCCcEEEEEEeC
Confidence 999999998654 677889999999999999998 589999999999999875 222221 246888999999999
Q ss_pred CCC-cEEEEEeCCCeEEEeeCCCCCcccCCCccCCCCCeeeEEEcCCCCCcceEEeCCCCCcEEEEEeCCCcEEEEecCC
Q 014472 328 KNE-TILASCCLGRRLMVWDLSRIDEEQTPEDAEDGPPELLFIHGGHTSKISDFSWNPCEDWVISSVAEDNILQIWQMAE 406 (424)
Q Consensus 328 ~~~-~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iw~~~~ 406 (424)
++. .+|++++.|+.|++||++.. .+...+.+|...|++++|+|+++ +|++++.||.|+|||+.+
T Consensus 528 ~~~~~~l~s~s~d~~v~vwd~~~~--------------~~~~~~~~h~~~v~~v~~spdg~-~l~sg~~Dg~i~iwd~~~ 592 (694)
T 3dm0_A 528 NTLQPTIVSASWDKTVKVWNLSNC--------------KLRSTLAGHTGYVSTVAVSPDGS-LCASGGKDGVVLLWDLAE 592 (694)
T ss_dssp CSSSCEEEEEETTSCEEEEETTTC--------------CEEEEECCCSSCEEEEEECTTSS-EEEEEETTSBCEEEETTT
T ss_pred CCCcceEEEEeCCCeEEEEECCCC--------------cEEEEEcCCCCCEEEEEEeCCCC-EEEEEeCCCeEEEEECCC
Confidence 863 47999999999999999864 55677889999999999999999 799999999999999987
Q ss_pred CC
Q 014472 407 NI 408 (424)
Q Consensus 407 ~~ 408 (424)
+.
T Consensus 593 ~~ 594 (694)
T 3dm0_A 593 GK 594 (694)
T ss_dssp TE
T ss_pred Cc
Confidence 64
No 109
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.98 E-value=2.4e-30 Score=243.37 Aligned_cols=245 Identities=9% Similarity=0.065 Sum_probs=185.8
Q ss_pred ccCCceeEEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCC---------------------CCCCCCCcEEEecCCCCe
Q 014472 123 NHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPP---------------------LDGACSPDLRLRGHSTEG 181 (424)
Q Consensus 123 ~h~~~v~~i~~~p~~~~~latg~~dg~v~iwd~~~~~~~~~---------------------~~~~~~~~~~~~~h~~~v 181 (424)
.....|.+++|+|||+ ++|+++.|++|+ |......... ..........+ .|...|
T Consensus 13 ~~~~~v~sv~~SpDG~-~iASas~D~TV~--d~~~~~~l~gh~~~v~~V~FsPdg~~~~~~~~~~~~~~~~~~-~~~~~V 88 (588)
T 2j04_A 13 EFEDWKNNLTWARDGT-LYLTTFPDISIG--QPKYAKDINCNSKNLFHVKEFPLEFENKLDFELAQQNGLLNS-QPVCYP 88 (588)
T ss_dssp CCSSSSCCEEECTTSC-EEEECSSSEEEE--EECCCSCCSSBGGGTEEEEEECCCCCCTTTTSCCCSSCSSTT-SCSCCE
T ss_pred HhhccEEEEEECCCCC-EEEEEcCCceee--cccccceecCCCccEEEEEECCCCCcceEEEEeCCCceEeec-CCCCcE
Confidence 3457889999999997 899999999997 4332110000 00011111111 457789
Q ss_pred eeEEecCCCCceEEEEeCCCcEEEEeCCCCCCCCcccceeeeecCCc-----ceeeEEeeCCCCcEEEEEeCCCeEEEEE
Q 014472 182 YGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEG-----VVEDVAWHLRHEYLFGSVGDDQYLLIWD 256 (424)
Q Consensus 182 ~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~-----~v~~i~~~~~~~~~~~s~~~dg~i~i~d 256 (424)
.+++|+|+|. +||+++.||.|++||... .+..+. |.. .+.+++|+|+|+ ++|+|+.||+|++||
T Consensus 89 ~~vawSPdG~-~LAs~s~dg~V~iwd~~~--------~l~~l~-~~~~~~~~sv~svafSPDG~-~LAsgs~DGtVkIWd 157 (588)
T 2j04_A 89 RVCKPSPIDD-WMAVLSNNGNVSVFKDNK--------MLTNLD-SKGNLSSRTYHCFEWNPIES-SIVVGNEDGELQFFS 157 (588)
T ss_dssp EEEEECSSSS-CEEEEETTSCEEEEETTE--------EEEECC-CSSCSTTTCEEEEEECSSSS-CEEEEETTSEEEEEE
T ss_pred EEEEECCCCC-EEEEEeCCCcEEEEeCCc--------eeeecc-CCCccccccEEEEEEcCCCC-EEEEEcCCCEEEEEE
Confidence 9999999998 799999999999999542 344445 554 599999999997 557999999999999
Q ss_pred CCCCCCCCC----eeEe----cccCCCeeEEEecCCCCeEEEEEeCCCcEEEEECCCCCC--cceee-cCCCCCEEEEEE
Q 014472 257 LRTPSVSKP----VQSV----VAHQSEVNCLAFNPFNEWILATGSTDKTVKLFDLRKIST--ALHTF-DSHKEEVFQVGW 325 (424)
Q Consensus 257 ~~~~~~~~~----~~~~----~~~~~~v~~i~~~~~~~~~l~~g~~dg~i~iwd~~~~~~--~~~~~-~~~~~~v~~~~~ 325 (424)
+..+....+ +..+ .+|...|.+++|+|+| +++++.|++|++||+..... ...++ .+|...|.+++|
T Consensus 158 ~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg---Laass~D~tVrlWd~~~~~~~~~~~tL~~~h~~~V~svaF 234 (588)
T 2j04_A 158 IRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV---LVAALSNNSVFSMTVSASSHQPVSRMIQNASRRKITDLKI 234 (588)
T ss_dssp CCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE---EEEEETTCCEEEECCCSSSSCCCEEEEECCCSSCCCCEEE
T ss_pred CCCCccccccceeeeeeecccccccccEEEEEEcCCc---EEEEeCCCeEEEEECCCCccccceeeecccccCcEEEEEE
Confidence 998653222 4554 5677899999999987 67888899999999987331 23456 478899999999
Q ss_pred cCCCCcEEEEEeCCCeEEEeeCCCCCcccCCCccCCCCCeeeEEEcCCCCCcceEEe--CCCCCcEEEEEeCCCcEEEEe
Q 014472 326 NPKNETILASCCLGRRLMVWDLSRIDEEQTPEDAEDGPPELLFIHGGHTSKISDFSW--NPCEDWVISSVAEDNILQIWQ 403 (424)
Q Consensus 326 sp~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~--~~~~~~~l~s~~~d~~i~iw~ 403 (424)
+ + ..||+++ ++.|++||+... +......+|...|++++| +|++. .++++++||+ ++|.
T Consensus 235 s--g-~~LASa~-~~tIkLWd~~~~--------------~~~~~~~gh~~~V~~va~~~s~d~~-~La~a~edG~-klw~ 294 (588)
T 2j04_A 235 V--D-YKVVLTC-PGYVHKIDLKNY--------------SISSLKTGSLENFHIIPLNHEKEST-ILLMSNKTSY-KVLL 294 (588)
T ss_dssp E--T-TEEEEEC-SSEEEEEETTTT--------------EEEEEECSCCSCCCEEEETTCSSCE-EEEECSSCEE-EEEE
T ss_pred E--C-CEEEEEe-CCeEEEEECCCC--------------eEEEEEcCCCceEEEEEeeeCCCCC-EEEEEcCCCC-EEEe
Confidence 9 4 4788887 699999999874 332333389999999999 99998 7999999999 9999
Q ss_pred cC
Q 014472 404 MA 405 (424)
Q Consensus 404 ~~ 405 (424)
+.
T Consensus 295 ~d 296 (588)
T 2j04_A 295 ED 296 (588)
T ss_dssp SS
T ss_pred ec
Confidence 86
No 110
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.97 E-value=2.1e-29 Score=232.01 Aligned_cols=238 Identities=10% Similarity=0.151 Sum_probs=179.6
Q ss_pred EeccCCceeEEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCCeeeEEecCCCCceEEEEeCC
Q 014472 121 QINHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDD 200 (424)
Q Consensus 121 ~~~h~~~v~~i~~~p~~~~~latg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~d 200 (424)
...|.+.|++++|+|++. +||+|+.+| ++||++.. ...... .+...+..+++.+.+..++++++.|
T Consensus 15 ~~~h~~~V~~v~fs~dg~-~la~g~~~~-~~iw~~~~----------~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~d 80 (355)
T 3vu4_A 15 ENHVSNPVTDYEFNQDQS-CLILSTLKS-FEIYNVHP----------VAHIMS--QEMRHLSKVRMLHRTNYVAFVTGVK 80 (355)
T ss_dssp ----CCCCCEEEECTTSS-EEEEECSSE-EEEEEETT----------EEEEEE--EECSCCCEEEECTTSSEEEEECSST
T ss_pred cccCCCceEEEEECCCCC-EEEEEcCCE-EEEEecCC----------cceeee--eecCCeEEEEEcCCCCEEEEEECCc
Confidence 356999999999999997 888888765 78999876 222222 2223577888888777445778889
Q ss_pred CcEEEEeCCCCCCCCcccceeeeecCCcceeeEEeeCCCCcEEEEEeCCCeEEEEECCCC-CCCCCeeEecccCCCeeEE
Q 014472 201 AQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTP-SVSKPVQSVVAHQSEVNCL 279 (424)
Q Consensus 201 g~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~~s~~~dg~i~i~d~~~~-~~~~~~~~~~~~~~~v~~i 279 (424)
+.|++||+.++. .+..+. +...|.+++|+++. ++ ++ .++.|++||+++. +....+ .. +...+
T Consensus 81 ~~v~iWd~~~~~------~~~~~~-~~~~v~~v~~~~~~--~~-~~-~~~~i~i~d~~~~~~~~~~~---~~---~~~~~ 143 (355)
T 3vu4_A 81 EVVHIWDDVKKQ------DVSRIK-VDAPVKDLFLSREF--IV-VS-YGDVISVFKFGNPWKRITDD---IR---FGGVC 143 (355)
T ss_dssp TEEEEEETTTTE------EEEEEE-CSSCEEEEEECSSE--EE-EE-ETTEEEEEESSTTCCBSSCC---EE---EEEEE
T ss_pred cEEEEEECCCCc------EEEEEE-CCCceEEEEEcCCE--EE-EE-EcCEEEEEECCCCceeeEEe---cc---CCceE
Confidence 999999998763 334444 67799999998753 33 33 4789999999987 432222 22 44455
Q ss_pred EecCCCCeEEEE--EeCCCcEEEEECCCCC--------------Cc-ceeecCCCCCEEEEEEcCCCCcEEEEEeCCCe-
Q 014472 280 AFNPFNEWILAT--GSTDKTVKLFDLRKIS--------------TA-LHTFDSHKEEVFQVGWNPKNETILASCCLGRR- 341 (424)
Q Consensus 280 ~~~~~~~~~l~~--g~~dg~i~iwd~~~~~--------------~~-~~~~~~~~~~v~~~~~sp~~~~~l~s~~~dg~- 341 (424)
++++ . ++++ |+.||.|++||+++.. .+ +..+.+|...|++++|+|++. +|++|+.|++
T Consensus 144 ~~s~--~-~la~~sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~-~l~s~s~d~~~ 219 (355)
T 3vu4_A 144 EFSN--G-LLVYSNEFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSD-MVATCSQDGTI 219 (355)
T ss_dssp EEET--T-EEEEEESSCTTCEEEEECCC------------------CCEEECCCSSCEEEEEECTTSS-EEEEEETTCSE
T ss_pred EEEc--c-EEEEeCCCcCcEEEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECCCCC-EEEEEeCCCCE
Confidence 6666 4 3444 6889999999999733 12 788999999999999999995 8999999998
Q ss_pred EEEeeCCCCCcccCCCccCCCCCeeeEEEc-C-CCCCcceEEeCCCCCcEEEEEeCCCcEEEEecCCCC
Q 014472 342 LMVWDLSRIDEEQTPEDAEDGPPELLFIHG-G-HTSKISDFSWNPCEDWVISSVAEDNILQIWQMAENI 408 (424)
Q Consensus 342 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~-~-h~~~v~~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~ 408 (424)
|+|||++++ +++..+. + |...|++++|+|+++ +|++++.|+.|+||++..+.
T Consensus 220 v~iwd~~~~--------------~~~~~~~~g~h~~~v~~~~~s~~~~-~l~s~s~d~~v~iw~~~~~~ 273 (355)
T 3vu4_A 220 IRVFKTEDG--------------VLVREFRRGLDRADVVDMKWSTDGS-KLAVVSDKWTLHVFEIFNDQ 273 (355)
T ss_dssp EEEEETTTC--------------CEEEEEECTTCCSCEEEEEECTTSC-EEEEEETTCEEEEEESSCCS
T ss_pred EEEEECCCC--------------cEEEEEEcCCCCCcEEEEEECCCCC-EEEEEECCCEEEEEEccCCC
Confidence 999999875 4456665 5 999999999999999 69999999999999998763
No 111
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=99.97 E-value=1.3e-28 Score=233.96 Aligned_cols=237 Identities=18% Similarity=0.290 Sum_probs=201.5
Q ss_pred EeccCCceeEEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCCeeeEEecCCCCceEEEEeCC
Q 014472 121 QINHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDD 200 (424)
Q Consensus 121 ~~~h~~~v~~i~~~p~~~~~latg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~d 200 (424)
...|...|.+++|++ ..+++|+.||.|++||+.. ......+.+|...|.+++| ++. +|++|+.|
T Consensus 195 ~~~h~~~v~~~~~~~---~~l~s~s~dg~i~~wd~~~----------~~~~~~~~~~~~~v~~~~~--~~~-~l~~~~~d 258 (445)
T 2ovr_B 195 LYGHTSTVRCMHLHE---KRVVSGSRDATLRVWDIET----------GQCLHVLMGHVAAVRCVQY--DGR-RVVSGAYD 258 (445)
T ss_dssp ECCCSSCEEEEEEET---TEEEEEETTSEEEEEESSS----------CCEEEEEECCSSCEEEEEE--CSS-CEEEEETT
T ss_pred ECCCCCcEEEEEecC---CEEEEEeCCCEEEEEECCC----------CcEEEEEcCCcccEEEEEE--CCC-EEEEEcCC
Confidence 346999999999964 3799999999999999987 4567788899999999999 344 79999999
Q ss_pred CcEEEEeCCCCCCCCcccceeeeecCCcceeeEEeeCCCCcEEEEEeCCCeEEEEECCCCCCCCCeeEecccCCCeeEEE
Q 014472 201 AQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLA 280 (424)
Q Consensus 201 g~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~ 280 (424)
|.|++||++++ ..+..+.+|...|.+++| ++. .+++++.||.|++||+++++. +..+..|...+.++.
T Consensus 259 g~i~iwd~~~~------~~~~~~~~~~~~v~~~~~--~~~-~l~~~~~d~~i~i~d~~~~~~---~~~~~~~~~~v~~~~ 326 (445)
T 2ovr_B 259 FMVKVWDPETE------TCLHTLQGHTNRVYSLQF--DGI-HVVSGSLDTSIRVWDVETGNC---IHTLTGHQSLTSGME 326 (445)
T ss_dssp SCEEEEEGGGT------EEEEEECCCSSCEEEEEE--CSS-EEEEEETTSCEEEEETTTCCE---EEEECCCCSCEEEEE
T ss_pred CEEEEEECCCC------cEeEEecCCCCceEEEEE--CCC-EEEEEeCCCeEEEEECCCCCE---EEEEcCCcccEEEEE
Confidence 99999999765 456667789999999999 444 567999999999999998664 777888999999999
Q ss_pred ecCCCCeEEEEEeCCCcEEEEECCCCCCcceeecC---CCCCEEEEEEcCCCCcEEEEEeCCCeEEEeeCCCCCcccCCC
Q 014472 281 FNPFNEWILATGSTDKTVKLFDLRKISTALHTFDS---HKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPE 357 (424)
Q Consensus 281 ~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~---~~~~v~~~~~sp~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~ 357 (424)
++ +. +|++|+.||.|++||+++ +.++..+.. |...|++++|++ .+|++++.||.|++||+.++.
T Consensus 327 ~~--~~-~l~~~~~dg~i~vwd~~~-~~~~~~~~~~~~~~~~v~~~~~~~---~~l~s~~~dg~v~iwd~~~~~------ 393 (445)
T 2ovr_B 327 LK--DN-ILVSGNADSTVKIWDIKT-GQCLQTLQGPNKHQSAVTCLQFNK---NFVITSSDDGTVKLWDLKTGE------ 393 (445)
T ss_dssp EE--TT-EEEEEETTSCEEEEETTT-CCEEEEECSTTSCSSCEEEEEECS---SEEEEEETTSEEEEEETTTCC------
T ss_pred Ee--CC-EEEEEeCCCeEEEEECCC-CcEEEEEccCCCCCCCEEEEEECC---CEEEEEeCCCeEEEEECCCCc------
Confidence 86 44 699999999999999998 677788876 888999999964 479999999999999998753
Q ss_pred ccCCCCCeeeEEE-----cCCCCCcceEEeCCCCCcEEEEEeCCCc----EEEEecCCC
Q 014472 358 DAEDGPPELLFIH-----GGHTSKISDFSWNPCEDWVISSVAEDNI----LQIWQMAEN 407 (424)
Q Consensus 358 ~~~~~~~~~~~~~-----~~h~~~v~~~~~~~~~~~~l~s~~~d~~----i~iw~~~~~ 407 (424)
.+..+ .+|...|++++|+|++. ++++++.||. |.|||+...
T Consensus 394 --------~~~~~~~~~~~~~~~~v~~~~~s~~~~-~la~~~~dg~~~~~l~v~df~~~ 443 (445)
T 2ovr_B 394 --------FIRNLVTLESGGSGGVVWRIRASNTKL-VCAVGSRNGTEETKLLVLDFDVD 443 (445)
T ss_dssp --------EEEEEEECTTGGGTCEEEEEEECSSEE-EEEEECSSSSSCCEEEEEECCCC
T ss_pred --------eeeeeeccccCCCCceEEEEEecCCEE-EEEEcccCCCCccEEEEEECCCC
Confidence 33333 46788899999999998 7999999998 999999764
No 112
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=99.97 E-value=8.4e-30 Score=235.42 Aligned_cols=206 Identities=12% Similarity=0.092 Sum_probs=161.7
Q ss_pred cCCceeEEEecCCCCcE-EEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCCeeeEEecCCCCceEEEEeCCCc
Q 014472 124 HDGEVNRARYMPQNPFL-IATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDDAQ 202 (424)
Q Consensus 124 h~~~v~~i~~~p~~~~~-latg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~ 202 (424)
+...+.+++|+|+|+.+ +|+++.|++|+|||+.+ ......+. |...|.+|+|+|++. +|++++.+ .
T Consensus 132 ~~~~~~~v~fSpDg~~la~as~~~d~~i~iwd~~~----------~~~~~~~~-~~~~V~~v~fspdg~-~l~s~s~~-~ 198 (365)
T 4h5i_A 132 ADDYTKLVYISREGTVAAIASSKVPAIMRIIDPSD----------LTEKFEIE-TRGEVKDLHFSTDGK-VVAYITGS-S 198 (365)
T ss_dssp TTCCEEEEEECTTSSCEEEEESCSSCEEEEEETTT----------TEEEEEEE-CSSCCCEEEECTTSS-EEEEECSS-C
T ss_pred cccCEEEEEEcCCCCEEEEEECCCCCEEEEeECCC----------CcEEEEeC-CCCceEEEEEccCCc-eEEeccce-e
Confidence 44568899999999843 34556789999999987 34455554 788899999999988 78888755 5
Q ss_pred EEEEeCCCCCCCCcccceeeeecCCcceeeEEeeCCCCcEEEEEeCCC----eEEEEECCCCCCC-CCeeEecccCCCee
Q 014472 203 ICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQ----YLLIWDLRTPSVS-KPVQSVVAHQSEVN 277 (424)
Q Consensus 203 i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~~s~~~dg----~i~i~d~~~~~~~-~~~~~~~~~~~~v~ 277 (424)
+++|+..++.. ........|...|.+++|+|++.. +++++.|+ .+++|++...... .....+..|...|+
T Consensus 199 ~~~~~~~~~~~----~~~~~~~~~~~~v~~v~fspdg~~-l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~ 273 (365)
T 4h5i_A 199 LEVISTVTGSC----IARKTDFDKNWSLSKINFIADDTV-LIAASLKKGKGIVLTKISIKSGNTSVLRSKQVTNRFKGIT 273 (365)
T ss_dssp EEEEETTTCCE----EEEECCCCTTEEEEEEEEEETTEE-EEEEEESSSCCEEEEEEEEETTEEEEEEEEEEESSCSCEE
T ss_pred EEEEEeccCcc----eeeeecCCCCCCEEEEEEcCCCCE-EEEEecCCcceeEEeecccccceecceeeeeecCCCCCeE
Confidence 66666655432 122334568899999999999875 45777666 6888998765421 11345567899999
Q ss_pred EEEecCCCCeEEEEEeCCCcEEEEECCCCCCccee-ecCCCCCEEEEEEcCCCCcEEEEEeCCCeEEEeeCCCC
Q 014472 278 CLAFNPFNEWILATGSTDKTVKLFDLRKISTALHT-FDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRI 350 (424)
Q Consensus 278 ~i~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~-~~~~~~~v~~~~~sp~~~~~l~s~~~dg~i~iwd~~~~ 350 (424)
+++|+|++. +||+|+.|++|+|||+++ ++++.. +.+|..+|++++|+|+++ +||+|+.|++|+||++...
T Consensus 274 ~~~~Spdg~-~lasgs~D~~V~iwd~~~-~~~~~~~~~gH~~~V~~v~fSpdg~-~laS~S~D~tvrvw~ip~~ 344 (365)
T 4h5i_A 274 SMDVDMKGE-LAVLASNDNSIALVKLKD-LSMSKIFKQAHSFAITEVTISPDST-YVASVSAANTIHIIKLPLN 344 (365)
T ss_dssp EEEECTTSC-EEEEEETTSCEEEEETTT-TEEEEEETTSSSSCEEEEEECTTSC-EEEEEETTSEEEEEECCTT
T ss_pred eEEECCCCC-ceEEEcCCCEEEEEECCC-CcEEEEecCcccCCEEEEEECCCCC-EEEEEeCCCeEEEEEcCCC
Confidence 999999998 699999999999999998 677776 478999999999999996 7999999999999999643
No 113
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.97 E-value=5.1e-28 Score=225.69 Aligned_cols=251 Identities=12% Similarity=0.077 Sum_probs=197.4
Q ss_pred EEEeccCCceeEEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCCeeeEEecCCCCceEEEEe
Q 014472 119 IQQINHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGS 198 (424)
Q Consensus 119 ~~~~~h~~~v~~i~~~p~~~~~latg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~ 198 (424)
...+.+...+.+++|+|++..++++++.++.|++||+.+ .+....+..+. .+.+++|+|++..++++++
T Consensus 25 ~~~~~~~~~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~----------~~~~~~~~~~~-~v~~~~~spdg~~l~~~~~ 93 (391)
T 1l0q_A 25 TATIPVGSNPMGAVISPDGTKVYVANAHSNDVSIIDTAT----------NNVIATVPAGS-SPQGVAVSPDGKQVYVTNM 93 (391)
T ss_dssp EEEEECSSSEEEEEECTTSSEEEEEEGGGTEEEEEETTT----------TEEEEEEECSS-SEEEEEECTTSSEEEEEET
T ss_pred EEEeecCCCcceEEECCCCCEEEEECCCCCeEEEEECCC----------CeEEEEEECCC-CccceEECCCCCEEEEEEC
Confidence 345556667999999999986778888999999999976 34445555444 8999999999985446666
Q ss_pred CCCcEEEEeCCCCCCCCcccceeeeecCCcceeeEEeeCCCCcEEEEEeCCCeEEEEECCCCCCCCCeeEecccCCCeeE
Q 014472 199 DDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNC 278 (424)
Q Consensus 199 ~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~ 278 (424)
.++.|++||+.++. .+..+. +...+.+++|+|+++.++++++.++.|++||+++++. +..+.. ...+.+
T Consensus 94 ~~~~v~v~d~~~~~------~~~~~~-~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~---~~~~~~-~~~~~~ 162 (391)
T 1l0q_A 94 ASSTLSVIDTTSNT------VAGTVK-TGKSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAV---INTVSV-GRSPKG 162 (391)
T ss_dssp TTTEEEEEETTTTE------EEEEEE-CSSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEE---EEEEEC-CSSEEE
T ss_pred CCCEEEEEECCCCe------EEEEEe-CCCCcceEEECCCCCEEEEEeCCCCEEEEEECCCCcE---EEEEec-CCCcce
Confidence 78999999998762 233333 4457899999999988878899999999999988653 444444 456799
Q ss_pred EEecCCCCeEEEEEeCCCcEEEEECCCCCCcceeecCCCCCEEEEEEcCCCCcEEEEEe---CCCeEEEeeCCCCCcccC
Q 014472 279 LAFNPFNEWILATGSTDKTVKLFDLRKISTALHTFDSHKEEVFQVGWNPKNETILASCC---LGRRLMVWDLSRIDEEQT 355 (424)
Q Consensus 279 i~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~s~~---~dg~i~iwd~~~~~~~~~ 355 (424)
++|+|+++.++++++.++.|++||+++ ...+..+. +...+.+++|+|+++. |++++ .++.|++||+..+
T Consensus 163 ~~~~~dg~~l~~~~~~~~~v~~~d~~~-~~~~~~~~-~~~~~~~~~~~~~g~~-l~~~~~~~~~~~v~~~d~~~~----- 234 (391)
T 1l0q_A 163 IAVTPDGTKVYVANFDSMSISVIDTVT-NSVIDTVK-VEAAPSGIAVNPEGTK-AYVTNVDKYFNTVSMIDTGTN----- 234 (391)
T ss_dssp EEECTTSSEEEEEETTTTEEEEEETTT-TEEEEEEE-CSSEEEEEEECTTSSE-EEEEEECSSCCEEEEEETTTT-----
T ss_pred EEECCCCCEEEEEeCCCCEEEEEECCC-CeEEEEEe-cCCCccceEECCCCCE-EEEEecCcCCCcEEEEECCCC-----
Confidence 999999997668888999999999997 55555555 4668999999999975 55555 7899999999874
Q ss_pred CCccCCCCCeeeEEEcCCCCCcceEEeCCCCCcEEEEEeCCCcEEEEecCCCCC
Q 014472 356 PEDAEDGPPELLFIHGGHTSKISDFSWNPCEDWVISSVAEDNILQIWQMAENIY 409 (424)
Q Consensus 356 ~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~ 409 (424)
+.+..+..|. .+.+++|+|++++++++++.|+.|++||+.++.+
T Consensus 235 ---------~~~~~~~~~~-~~~~~~~s~dg~~l~~s~~~d~~v~v~d~~~~~~ 278 (391)
T 1l0q_A 235 ---------KITARIPVGP-DPAGIAVTPDGKKVYVALSFXNTVSVIDTATNTI 278 (391)
T ss_dssp ---------EEEEEEECCS-SEEEEEECTTSSEEEEEETTTTEEEEEETTTTEE
T ss_pred ---------eEEEEEecCC-CccEEEEccCCCEEEEEcCCCCEEEEEECCCCcE
Confidence 4455555554 4789999999997668889999999999987643
No 114
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=99.97 E-value=5.5e-28 Score=218.68 Aligned_cols=243 Identities=23% Similarity=0.386 Sum_probs=193.9
Q ss_pred eeEEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCCeeeEEecCCCCceEEEEeCCCcEEEEe
Q 014472 128 VNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDDAQICLWD 207 (424)
Q Consensus 128 v~~i~~~p~~~~~latg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd 207 (424)
+++|+|++++ +||+|. |++|+|||+.+ +.......+.+|...|++++|+|++. +|++|+.||.|++||
T Consensus 28 ~~~l~WS~~~--~lAvg~-D~tV~iWd~~t--------g~~~~~~~~~~~~~~V~~v~~~~~~~-~l~sgs~Dg~v~iw~ 95 (318)
T 4ggc_A 28 LNLVDWSSGN--VLAVAL-DNSVYLWSASS--------GDILQLLQMEQPGEYISSVAWIKEGN-YLAVGTSSAEVQLWD 95 (318)
T ss_dssp CBCEEECTTS--EEEEEE-TTEEEEEETTT--------CCEEEEEECCSTTCCEEEEEECTTSS-EEEEEETTSEEEEEE
T ss_pred ceEEEECCCC--EEEEEe-CCEEEEEECCC--------CCEEEEEEecCCCCeEEEEEECCCCC-EEEEEECCCcEEEee
Confidence 5789999875 788875 89999999987 22333334557888999999999887 799999999999999
Q ss_pred CCCCCCCCcccceeeeecCCcceeeEEeeCCCCcEEEEEeCCCeEEEEECCCCCCCCCeeEecccCCCeeEEEecCCCCe
Q 014472 208 INAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEW 287 (424)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~ 287 (424)
+.++ +.+..+.+|...+.++.+.+ .++++++.++.+++|+...... .+..+.+|...+.++++++.+.
T Consensus 96 ~~~~------~~~~~~~~h~~~~~~~~~~~---~~l~s~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~- 163 (318)
T 4ggc_A 96 VQQQ------KRLRNMTSHSARVGSLSWNS---YILSSGSRSGHIHHHDVRVAEH--HVATLSGHSQEVCGLRWAPDGR- 163 (318)
T ss_dssp TTTT------EEEEEEECCSSCEEEEEEET---TEEEEEETTSEEEEEETTSSSC--EEEEEECCSSCEEEEEECTTSS-
T ss_pred cCCc------eeEEEecCccceEEEeecCC---CEEEEEecCCceEeeecCCCce--eEEEEcCccCceEEEEEcCCCC-
Confidence 9876 45667788999888877653 3678999999999999987653 4667788999999999999998
Q ss_pred EEEEEeCCCcEEEEECCCCC---CcceeecCCCCCEEEEEEcCCCCcEEE--EEeCCCeEEEeeCCCCCcccCCCccCCC
Q 014472 288 ILATGSTDKTVKLFDLRKIS---TALHTFDSHKEEVFQVGWNPKNETILA--SCCLGRRLMVWDLSRIDEEQTPEDAEDG 362 (424)
Q Consensus 288 ~l~~g~~dg~i~iwd~~~~~---~~~~~~~~~~~~v~~~~~sp~~~~~l~--s~~~dg~i~iwd~~~~~~~~~~~~~~~~ 362 (424)
+|++++.||.|++||+++.. ........+.+.|.++.++|.+..++. +++.++.|++||.....
T Consensus 164 ~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~~~~----------- 232 (318)
T 4ggc_A 164 HLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGA----------- 232 (318)
T ss_dssp EEEEEETTSCEEEEESSCBTTBSCCSEEECCCCSCEEEEEECTTSTTEEEEEECTTTCEEEEEETTTCC-----------
T ss_pred EEEEEecCcceeEEECCCCcccccceeeecccCCceEEEEecCCCCcEEEEEecCCCCEEEEEeccccc-----------
Confidence 69999999999999998732 234556678899999999998877654 55678999999998742
Q ss_pred CCeeeEEEcCCCCCcceEEeCCCCCcEEEE-EeCCCcEEEEecCCCCC
Q 014472 363 PPELLFIHGGHTSKISDFSWNPCEDWVISS-VAEDNILQIWQMAENIY 409 (424)
Q Consensus 363 ~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s-~~~d~~i~iw~~~~~~~ 409 (424)
......+...+..+.|+|++..++++ ++.|+.|+|||+.++..
T Consensus 233 ----~~~~~~~~~~v~~~~~~~~~~~~~~~sg~~d~~i~iwd~~~~~~ 276 (318)
T 4ggc_A 233 ----CLSAVDAHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAK 276 (318)
T ss_dssp ----EEEEEECSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCE
T ss_pred ----ccccccceeeeeeeeecccccceEEEEEcCCCEEEEEECCCCcE
Confidence 22223456679999999999965443 34799999999987643
No 115
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.97 E-value=1.2e-28 Score=248.91 Aligned_cols=252 Identities=16% Similarity=0.225 Sum_probs=198.9
Q ss_pred CccEEEEccCCCCCCCCCCceEEEEEeecCCCCCCCeEEEEEEEcCCCCCCcccCCCCCcCCCCCCCCCCCCcEE-EEEE
Q 014472 43 PSLTVEWLPDREEPPGKDYSVQKMILGTHTSENEPNYLMLAQVQLPLDDSENDARHYDDDRSDFGGFGCANGKVQ-IIQQ 121 (424)
Q Consensus 43 p~~~~~~~p~~~~~~~~~~~~~~~~~gt~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 121 (424)
+..++.|.|+. ..++.|+ .+..|.++.+.- +..+ +...
T Consensus 11 ~V~~l~~s~dg----------~~latg~-----~dg~I~vwd~~~--------------------------~~~~~~~~l 49 (753)
T 3jro_A 11 LIHDAVLDYYG----------KRLATCS-----SDKTIKIFEVEG--------------------------ETHKLIDTL 49 (753)
T ss_dssp CEEEECCCSSS----------CCEEEEE-----TTTEEEEEEEET--------------------------TEEEEEEEE
T ss_pred eeEEEEECCCC----------CeEEEEE-----CCCcEEEEecCC--------------------------CCCccceec
Confidence 46788888875 3465555 346788887741 1122 2334
Q ss_pred eccCCceeEEEecCC--CCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCCeeeEEecCC--CCceEEEE
Q 014472 122 INHDGEVNRARYMPQ--NPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKF--KEGHLLSG 197 (424)
Q Consensus 122 ~~h~~~v~~i~~~p~--~~~~latg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~--~~~~l~s~ 197 (424)
.+|.+.|++++|+|+ + .+|++|+.||.|++||+.. +.......+.+|...|.+++|+|+ +. +|++|
T Consensus 50 ~~h~~~V~~l~~s~~~~~-~~l~s~s~Dg~I~vwd~~~--------~~~~~~~~~~~h~~~V~~v~~sp~~~~~-~l~sg 119 (753)
T 3jro_A 50 TGHEGPVWRVDWAHPKFG-TILASCSYDGKVLIWKEEN--------GRWSQIAVHAVHSASVNSVQWAPHEYGP-LLLVA 119 (753)
T ss_dssp CCCSSCEEEEEECCTTSC-SEEEEEETTSCEEEEEEET--------TEEEEEEEECCCSSCEEEEEECCGGGCS-EEEEE
T ss_pred cCCcCceEEEEecCCCCC-CEEEEEeCCCeEEEEECCC--------CcccccccccCCCCCeEEEEECCCCCCC-EEEEE
Confidence 469999999999987 5 4899999999999999987 223356778889999999999998 65 89999
Q ss_pred eCCCcEEEEeCCCCCCCCcccceeeeecCCcceeeEEeeCC-------------CCcEEEEEeCCCeEEEEECCCCCCC-
Q 014472 198 SDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLR-------------HEYLFGSVGDDQYLLIWDLRTPSVS- 263 (424)
Q Consensus 198 ~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~-------------~~~~~~s~~~dg~i~i~d~~~~~~~- 263 (424)
+.||.|++||++..... ....+.+|...|.+++|+|. +. ++++|+.||.|++||++++...
T Consensus 120 s~dg~I~vwdl~~~~~~----~~~~~~~~~~~v~~l~~~p~~~~~~~~~~~~~d~~-~l~sgs~dg~I~iwd~~~~~~~~ 194 (753)
T 3jro_A 120 SSDGKVSVVEFKENGTT----SPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESR-KFVTGGADNLVKIWKYNSDAQTY 194 (753)
T ss_dssp ETTSEEEEEECCSSSCC----CCEEEECCSSCEEEEEECCCC---------CGGGC-CEEEEETTSCEEEEEEETTTTEE
T ss_pred eCCCcEEEEEeecCCCc----ceeEeecCCCceEEEEecCcccccccccccCCCCC-EEEEEECCCeEEEEeccCCcccc
Confidence 99999999999876432 23345679999999999995 54 5679999999999999876431
Q ss_pred CCeeEecccCCCeeEEEecCCC--CeEEEEEeCCCcEEEEECCCCCC----cceeecCCCCCEEEEEEcCCCCcEEEEEe
Q 014472 264 KPVQSVVAHQSEVNCLAFNPFN--EWILATGSTDKTVKLFDLRKIST----ALHTFDSHKEEVFQVGWNPKNETILASCC 337 (424)
Q Consensus 264 ~~~~~~~~~~~~v~~i~~~~~~--~~~l~~g~~dg~i~iwd~~~~~~----~~~~~~~~~~~v~~~~~sp~~~~~l~s~~ 337 (424)
.....+..|...|++++|+|++ ..+|++|+.||.|++||++.... .+.....|...|++++|+|++. +|++++
T Consensus 195 ~~~~~~~~h~~~V~~l~~sp~~~~~~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~-~l~s~s 273 (753)
T 3jro_A 195 VLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGN-VLALSG 273 (753)
T ss_dssp EEEEEECCCSSCEEEEEECCCCSSSEEEEEEESSSCEEEEEESSSSSCCBCCBSSSSCCSSCCCCEEECTTTC-CEEEEC
T ss_pred eeeeeecCCCCcEEEEEeccCCCCCCEEEEEecCCEEEEecCCCCCCcceeEEeccCCCCCceEEEEEcCCCC-EEEEEc
Confidence 2345667899999999999993 34799999999999999987421 3344456889999999999996 689999
Q ss_pred CCCeEEEeeCCCCC
Q 014472 338 LGRRLMVWDLSRID 351 (424)
Q Consensus 338 ~dg~i~iwd~~~~~ 351 (424)
.||.|++|++....
T Consensus 274 ~Dg~I~vwd~~~~~ 287 (753)
T 3jro_A 274 GDNKVTLWKENLEG 287 (753)
T ss_dssp SSSCEECCBCCSSS
T ss_pred CCCEEEEEecCCCC
Confidence 99999999998543
No 116
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=99.97 E-value=4.8e-28 Score=223.46 Aligned_cols=215 Identities=16% Similarity=0.263 Sum_probs=183.1
Q ss_pred CCCCCcEEEecCCCCeeeEEecCCCCceEEEEeCCCcEEEEeCCCCCCCCcccceeeeecCCcceeeEEeeCCCCcEEEE
Q 014472 166 GACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGS 245 (424)
Q Consensus 166 ~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~~s 245 (424)
+.......+.+|...|++++|+|++. +|++|+.||.|++||+.++ ..+..+.+|...|.+++|+|++. +|++
T Consensus 20 G~~~~~~~l~~h~~~v~~~~~s~~~~-~l~~~~~dg~i~vwd~~~~------~~~~~~~~h~~~v~~~~~~~~~~-~l~s 91 (369)
T 3zwl_B 20 GSHMKAIKLTGHERPLTQVKYNKEGD-LLFSCSKDSSASVWYSLNG------ERLGTLDGHTGTIWSIDVDCFTK-YCVT 91 (369)
T ss_dssp CCSEEEEEEECCSSCEEEEEECTTSC-EEEEEESSSCEEEEETTTC------CEEEEECCCSSCEEEEEECTTSS-EEEE
T ss_pred ccccccEEEEEeeceEEEEEEcCCCC-EEEEEeCCCEEEEEeCCCc------hhhhhhhhcCCcEEEEEEcCCCC-EEEE
Confidence 44455667899999999999999887 8999999999999999876 34566778999999999999886 5679
Q ss_pred EeCCCeEEEEECCCCCCCCCeeEecccCCCeeEEEecCCCCeEEEEEeCC-----CcEEEEECCCCC----------Ccc
Q 014472 246 VGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATGSTD-----KTVKLFDLRKIS----------TAL 310 (424)
Q Consensus 246 ~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~l~~g~~d-----g~i~iwd~~~~~----------~~~ 310 (424)
++.||.|++||+++++. +..+. +...+.+++|+|++. +|++++.+ |.|++||++... .++
T Consensus 92 ~~~dg~i~iwd~~~~~~---~~~~~-~~~~v~~~~~~~~~~-~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~ 166 (369)
T 3zwl_B 92 GSADYSIKLWDVSNGQC---VATWK-SPVPVKRVEFSPCGN-YFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPI 166 (369)
T ss_dssp EETTTEEEEEETTTCCE---EEEEE-CSSCEEEEEECTTSS-EEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCS
T ss_pred EeCCCeEEEEECCCCcE---EEEee-cCCCeEEEEEccCCC-EEEEecCCccCCCCEEEEEEecCCccceeeccccccee
Confidence 99999999999998664 55554 888999999999998 58888888 999999998633 244
Q ss_pred eeecCCCC--CEEEEEEcCCCCcEEEEEeCCCeEEEeeCCCCCcccCCCccCCCCCeeeEEEcCCCCCcceEEeCCCCCc
Q 014472 311 HTFDSHKE--EVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPEDAEDGPPELLFIHGGHTSKISDFSWNPCEDW 388 (424)
Q Consensus 311 ~~~~~~~~--~v~~~~~sp~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~ 388 (424)
..+..|.. .+.+++|+|++. +|++++.||.|++||++... ..+..+..|...|.+++|+|++.
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~-------------~~~~~~~~~~~~v~~~~~~~~~~- 231 (369)
T 3zwl_B 167 HKIITHEGLDAATVAGWSTKGK-YIIAGHKDGKISKYDVSNNY-------------EYVDSIDLHEKSISDMQFSPDLT- 231 (369)
T ss_dssp EEEECCTTCCCEEEEEECGGGC-EEEEEETTSEEEEEETTTTT-------------EEEEEEECCSSCEEEEEECTTSS-
T ss_pred eeccCCcCccceeEEEEcCCCC-EEEEEcCCCEEEEEECCCCc-------------EeEEEEecCCCceeEEEECCCCC-
Confidence 55566666 999999999996 78999999999999998632 56777888999999999999999
Q ss_pred EEEEEeCCCcEEEEecCCCC
Q 014472 389 VISSVAEDNILQIWQMAENI 408 (424)
Q Consensus 389 ~l~s~~~d~~i~iw~~~~~~ 408 (424)
+|++++.|+.|++||+.++.
T Consensus 232 ~l~~~~~d~~i~v~d~~~~~ 251 (369)
T 3zwl_B 232 YFITSSRDTNSFLVDVSTLQ 251 (369)
T ss_dssp EEEEEETTSEEEEEETTTCC
T ss_pred EEEEecCCceEEEEECCCCc
Confidence 68999999999999998764
No 117
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.97 E-value=3.5e-27 Score=217.13 Aligned_cols=251 Identities=12% Similarity=0.149 Sum_probs=181.7
Q ss_pred ceeEEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCCeeeEEecCCCCceEEEEeCCCcEEEE
Q 014472 127 EVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDDAQICLW 206 (424)
Q Consensus 127 ~v~~i~~~p~~~~~latg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vw 206 (424)
.+..+++.+++..++++|+.++.|+|||..+ ......+. |...|.+++|+++ .++++ .|+.|++|
T Consensus 60 ~~~~~~~~~~~~~~~~~~~~d~~v~iWd~~~----------~~~~~~~~-~~~~v~~v~~~~~---~~~~~-~~~~i~i~ 124 (355)
T 3vu4_A 60 HLSKVRMLHRTNYVAFVTGVKEVVHIWDDVK----------KQDVSRIK-VDAPVKDLFLSRE---FIVVS-YGDVISVF 124 (355)
T ss_dssp CCCEEEECTTSSEEEEECSSTTEEEEEETTT----------TEEEEEEE-CSSCEEEEEECSS---EEEEE-ETTEEEEE
T ss_pred CeEEEEEcCCCCEEEEEECCccEEEEEECCC----------CcEEEEEE-CCCceEEEEEcCC---EEEEE-EcCEEEEE
Confidence 5788889888876667788899999999987 34455555 6779999999874 34444 47899999
Q ss_pred eCCCC-CCCCcccceeeeecCCcceeeEEeeCCCCcEEEE-EeCCCeEEEEECCCCCC------------CCC-eeEecc
Q 014472 207 DINAA-PKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGS-VGDDQYLLIWDLRTPSV------------SKP-VQSVVA 271 (424)
Q Consensus 207 d~~~~-~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~~s-~~~dg~i~i~d~~~~~~------------~~~-~~~~~~ 271 (424)
|+.+. ..... +.. +...+++++ ..++++ |+.||.|++||++++.. ..+ +..+.+
T Consensus 125 d~~~~~~~~~~------~~~---~~~~~~~s~--~~la~~sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~ 193 (355)
T 3vu4_A 125 KFGNPWKRITD------DIR---FGGVCEFSN--GLLVYSNEFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKA 193 (355)
T ss_dssp ESSTTCCBSSC------CEE---EEEEEEEET--TEEEEEESSCTTCEEEEECCC------------------CCEEECC
T ss_pred ECCCCceeeEE------ecc---CCceEEEEc--cEEEEeCCCcCcEEEEEECCCCCccccccccccccccCcccEEEEc
Confidence 99876 32222 222 344556666 334333 68999999999987541 112 677889
Q ss_pred cCCCeeEEEecCCCCeEEEEEeCCCc-EEEEECCCCCCcceeec-C-CCCCEEEEEEcCCCCcEEEEEeCCCeEEEeeCC
Q 014472 272 HQSEVNCLAFNPFNEWILATGSTDKT-VKLFDLRKISTALHTFD-S-HKEEVFQVGWNPKNETILASCCLGRRLMVWDLS 348 (424)
Q Consensus 272 ~~~~v~~i~~~~~~~~~l~~g~~dg~-i~iwd~~~~~~~~~~~~-~-~~~~v~~~~~sp~~~~~l~s~~~dg~i~iwd~~ 348 (424)
|...|++++|+|++. +||+|+.||+ |++||+++ ++++..+. + |...|.+++|+|++. +|++++.|++|+|||+.
T Consensus 194 h~~~v~~~~~s~~g~-~l~s~s~d~~~v~iwd~~~-~~~~~~~~~g~h~~~v~~~~~s~~~~-~l~s~s~d~~v~iw~~~ 270 (355)
T 3vu4_A 194 HTNPIKMVRLNRKSD-MVATCSQDGTIIRVFKTED-GVLVREFRRGLDRADVVDMKWSTDGS-KLAVVSDKWTLHVFEIF 270 (355)
T ss_dssp CSSCEEEEEECTTSS-EEEEEETTCSEEEEEETTT-CCEEEEEECTTCCSCEEEEEECTTSC-EEEEEETTCEEEEEESS
T ss_pred cCCceEEEEECCCCC-EEEEEeCCCCEEEEEECCC-CcEEEEEEcCCCCCcEEEEEECCCCC-EEEEEECCCEEEEEEcc
Confidence 999999999999987 6999999998 99999998 67888887 5 999999999999996 79999999999999998
Q ss_pred CCCcccCCCc---------cCCCCCeeeEEEcCCCCCcceEEeCCCCCcEEEEEeCCCcEEEEecCCC
Q 014472 349 RIDEEQTPED---------AEDGPPELLFIHGGHTSKISDFSWNPCEDWVISSVAEDNILQIWQMAEN 407 (424)
Q Consensus 349 ~~~~~~~~~~---------~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iw~~~~~ 407 (424)
.......... ..............+......++|++++. .|++++.||.+++|++..+
T Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~d~~-~l~~~~~dg~~~~~~~~~~ 337 (355)
T 3vu4_A 271 NDQDNKRHALKGWINMKYFQSEWSLCNFKLSVDKHVRGCKIAWISESS-LVVVWPHTRMIETFKVVFD 337 (355)
T ss_dssp CCSCCCSEETTTTEECCCCCCSSCSEEEECCCCTTCCCCEEEESSSSE-EEEEETTTTEEEEEEEEEE
T ss_pred CCCCcccccccceeeccccccccceeEEEeccCCCCCceEEEEeCCCC-EEEEEeCCCeEEEEEEEcC
Confidence 6532211000 00000011111112223357799999999 6889999999999998754
No 118
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.97 E-value=5.5e-28 Score=213.85 Aligned_cols=257 Identities=11% Similarity=0.091 Sum_probs=174.9
Q ss_pred CCCcEEEEEEeccCC-----ceeEEEecCCCC--cEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCC-----
Q 014472 112 ANGKVQIIQQINHDG-----EVNRARYMPQNP--FLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHST----- 179 (424)
Q Consensus 112 ~~~~~~~~~~~~h~~-----~v~~i~~~p~~~--~~latg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~h~~----- 179 (424)
..+.++++.++..+. .+.++.|-..+. ..+++++ ...|++|+.... .++....++..|..
T Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~v~lw~~~~~-------~~~~~~~~~~~~~~~v~~~ 92 (356)
T 2w18_A 21 NPGNLQLVSELKNPSGSCSVDVSAMFWERAGCKEPCIITAC-EDVVSLWKALDA-------WQWEKLYTWHFAEVPVLQI 92 (356)
T ss_dssp ---CEEEEEEECCCCSSCEEEEEEEEEC----CEEEEEEEE-SSEEEEEEESSS-------SBEEEEEEEECCSSCEEEE
T ss_pred CcceeeeeehhcCCCCCeEEEEeeeeeccCCCCccEEEEec-cceEEEcccCCC-------ccceeeEEEeccCceeEEE
Confidence 356788888887654 345555544331 2566666 468999998872 12344555555554
Q ss_pred --------------------CeeeEEecCC----CCceEEEEeC--------------------CCcEEEEeCCCCCCCC
Q 014472 180 --------------------EGYGLSWSKF----KEGHLLSGSD--------------------DAQICLWDINAAPKNK 215 (424)
Q Consensus 180 --------------------~v~~l~~~~~----~~~~l~s~~~--------------------dg~i~vwd~~~~~~~~ 215 (424)
.|.+|+++|+ ++ .+++++. |+.|++|++....
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~v~sla~spd~~~~~~-~l~s~g~~~~v~~l~~g~lv~ss~~g~d~~V~~~~~s~dG--- 168 (356)
T 2w18_A 93 VPVPDVYNLVCVALGNLEIREIRALFCSSDDESEKQ-VLLKSGNIKAVLGLTKRRLVSSSGTLSDQQVEVMTFAEDG--- 168 (356)
T ss_dssp CCCTTCCSCEEEEECSSSEEEEEEECC------CCE-EEEEEEEEEEEEEETTTEEEEEESSSTTCEEEEEEECTTS---
T ss_pred EEcCcccceeeeeeccccccceEEEEECCCcccccc-EEEeCCCeEEEEecCCCcEEEecccCCCCcEEEEEECCCC---
Confidence 4566666776 44 4555442 7778888874321
Q ss_pred cccceeeeecCCcceeeEEeeC---CCCcEEEEEeCCCeEEEEECCCCCCCCCeeEecccC---CCeeEEEecCCCCeE-
Q 014472 216 SLEAMQIFKVHEGVVEDVAWHL---RHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQ---SEVNCLAFNPFNEWI- 288 (424)
Q Consensus 216 ~~~~~~~~~~~~~~v~~i~~~~---~~~~~~~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~---~~v~~i~~~~~~~~~- 288 (424)
+.+..+..|...+..++|++ ++ .+||+++.|++|+|||+++++. +.++.+|. ..+.+++|+|++..+
T Consensus 169 --~~~~s~~~~~~~v~~l~fs~~~g~~-~~LaSgS~D~TIkIWDl~TGk~---l~tL~g~~~~v~~v~~vafSpdG~~lv 242 (356)
T 2w18_A 169 --GGKENQFLMPPEETILTFAEVQGMQ-EALLGTTIMNNIVIWNLKTGQL---LKKMHIDDSYQASVCHKAYSEMGLLFI 242 (356)
T ss_dssp --CEEEEEEECCCSSCEEEEEEEETST-TEEEEEETTSEEEEEETTTCCE---EEEEECCC---CCCEEEEEEETTEEEE
T ss_pred --ceeeeeccCCCceeeEEeeccCCCC-ceEEEecCCCcEEEEECCCCcE---EEEEcCCCcceeeeEEEEECCCCCEEE
Confidence 23445567888888888888 44 4778999999999999999775 66666543 467788999988743
Q ss_pred ----------EEEEeCCCcEEEEECCCCCCcceee-----cCCCCCEEEEEEcCCCCcEEEEEeCCCeEEEeeCCCCCcc
Q 014472 289 ----------LATGSTDKTVKLFDLRKISTALHTF-----DSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEE 353 (424)
Q Consensus 289 ----------l~~g~~dg~i~iwd~~~~~~~~~~~-----~~~~~~v~~~~~sp~~~~~l~s~~~dg~i~iwd~~~~~~~ 353 (424)
+++|+.|++|++||..+ +..+..+ .+|...+.+..++ + .++++++.|++|+|||+.++
T Consensus 243 s~s~~~~~w~laSGs~D~tIklWd~~t-gk~l~v~~~~~p~Gh~~~~lsg~~s--g-~~lASgS~DgTIkIWDl~tG--- 315 (356)
T 2w18_A 243 VLSHPCAKESESLRSPVFQLIVINPKT-TLSVGVMLYCLPPGQAGRFLEGDVK--D-HCAAAILTSGTIAIWDLLLG--- 315 (356)
T ss_dssp EEC------------CCEEEEEEETTT-TEEEEEEEECCCTTCCCCEEEEEEE--T-TEEEEEETTSCEEEEETTTC---
T ss_pred EeccCCCcceeeccCCCcEEEEEECCC-CEEEEEEEeeccCCCcceeEccccC--C-CEEEEEcCCCcEEEEECCCC---
Confidence 36788999999999987 5655544 3666666555555 4 47999999999999999986
Q ss_pred cCCCccCCCCCeeeEEEcCCCCCcc-eEEeCCCCCcEEEEEeCCCcEEEEecC
Q 014472 354 QTPEDAEDGPPELLFIHGGHTSKIS-DFSWNPCEDWVISSVAEDNILQIWQMA 405 (424)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~~h~~~v~-~~~~~~~~~~~l~s~~~d~~i~iw~~~ 405 (424)
+++.++.+|...+. .++|+|+|+ +|++|+.|++|+|||+.
T Consensus 316 -----------k~l~tL~gH~~~vvs~vafSPDG~-~LaSGS~D~TIklWd~~ 356 (356)
T 2w18_A 316 -----------QCTALLPPVSDQHWSFVKWSGTDS-HLLAGQKDGNIFVYHYS 356 (356)
T ss_dssp -----------SEEEEECCC--CCCCEEEECSSSS-EEEEECTTSCEEEEEEC
T ss_pred -----------cEEEEecCCCCCeEEEEEECCCCC-EEEEEECCCcEEEecCC
Confidence 56778888987666 589999999 69999999999999963
No 119
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.97 E-value=1e-27 Score=219.79 Aligned_cols=244 Identities=10% Similarity=0.083 Sum_probs=174.8
Q ss_pred CCceeEEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEE-ecCCCCeeeEEecC--CCCceEEEEeCCC
Q 014472 125 DGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRL-RGHSTEGYGLSWSK--FKEGHLLSGSDDA 201 (424)
Q Consensus 125 ~~~v~~i~~~p~~~~~latg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~-~~h~~~v~~l~~~~--~~~~~l~s~~~dg 201 (424)
...|.++.|+|. +++|+.|+.|++|+.......... ........+ .+|...|.+++|+| ++. +|++|+.||
T Consensus 76 ~~~v~~~~~~~~----~~s~s~D~~i~~w~~~~~~~~~~~-~~~~~~~~~~~~~~~~v~~~~~~~~~~~~-~l~s~s~dg 149 (343)
T 3lrv_A 76 TPNPRTGGEHPA----IISRGPCNRLLLLYPGNQITILDS-KTNKVLREIEVDSANEIIYMYGHNEVNTE-YFIWADNRG 149 (343)
T ss_dssp EECCCTTCCCCS----EEEECSTTEEEEEETTTEEEEEET-TTCCEEEEEECCCSSCEEEEECCC---CC-EEEEEETTC
T ss_pred cCCceeeeeCCc----eEEecCCCeEEEEEccCceEEeec-CCcceeEEeecCCCCCEEEEEcCCCCCCC-EEEEEeCCC
Confidence 457888999986 889999999999987641000000 001212233 36778999999999 887 799999999
Q ss_pred cEEEEeCCCCCCCCcccceeee-ecCCcceeeEEeeCCCCcEEEEEeCCCeEEEEECCCCCCCCCeeEecc-cCCCeeEE
Q 014472 202 QICLWDINAAPKNKSLEAMQIF-KVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVA-HQSEVNCL 279 (424)
Q Consensus 202 ~i~vwd~~~~~~~~~~~~~~~~-~~~~~~v~~i~~~~~~~~~~~s~~~dg~i~i~d~~~~~~~~~~~~~~~-~~~~v~~i 279 (424)
.|++||++++.. .... ..|...|.+++|+|++. +|++|+.||.|++||++++.. ....+.. |..+|+++
T Consensus 150 ~i~~wd~~~~~~------~~~~~~~~~~~i~~~~~~pdg~-~lasg~~dg~i~iwd~~~~~~--~~~~~~~~h~~~v~~l 220 (343)
T 3lrv_A 150 TIGFQSYEDDSQ------YIVHSAKSDVEYSSGVLHKDSL-LLALYSPDGILDVYNLSSPDQ--ASSRFPVDEEAKIKEV 220 (343)
T ss_dssp CEEEEESSSSCE------EEEECCCSSCCCCEEEECTTSC-EEEEECTTSCEEEEESSCTTS--CCEECCCCTTSCEEEE
T ss_pred cEEEEECCCCcE------EEEEecCCCCceEEEEECCCCC-EEEEEcCCCEEEEEECCCCCC--CccEEeccCCCCEEEE
Confidence 999999987632 2222 23556899999999986 678999999999999998764 1155666 99999999
Q ss_pred EecCCCCeEEEEEeCCCcEEEEECCCCCCcceeecC---CCCCEE--EEEEcCCCCcEEEEEeC-CCeEEEeeCCCCCcc
Q 014472 280 AFNPFNEWILATGSTDKTVKLFDLRKISTALHTFDS---HKEEVF--QVGWNPKNETILASCCL-GRRLMVWDLSRIDEE 353 (424)
Q Consensus 280 ~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~---~~~~v~--~~~~sp~~~~~l~s~~~-dg~i~iwd~~~~~~~ 353 (424)
+|+|++. +|++++ ++.|++||+++ ...+..+.. |...+. +++|+|+++ +|++++. |+.|+||++......
T Consensus 221 ~fs~~g~-~l~s~~-~~~v~iwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-~l~~~s~~d~~i~v~~~~~~~~~ 296 (343)
T 3lrv_A 221 KFADNGY-WMVVEC-DQTVVCFDLRK-DVGTLAYPTYTIPEFKTGTVTYDIDDSGK-NMIAYSNESNSLTIYKFDKKTKN 296 (343)
T ss_dssp EECTTSS-EEEEEE-SSBEEEEETTS-STTCBSSCCCBC-----CCEEEEECTTSS-EEEEEETTTTEEEEEEECTTTCS
T ss_pred EEeCCCC-EEEEEe-CCeEEEEEcCC-CCcceeecccccccccccceEEEECCCCC-EEEEecCCCCcEEEEEEcccccc
Confidence 9999988 588888 55999999998 444444432 444444 699999996 6888887 999999999764311
Q ss_pred cCCCccCCCCCeeeEEEcCCCCCcceEEeCC---CCCcEEEEEeCCCcEEEEecCC
Q 014472 354 QTPEDAEDGPPELLFIHGGHTSKISDFSWNP---CEDWVISSVAEDNILQIWQMAE 406 (424)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~---~~~~~l~s~~~d~~i~iw~~~~ 406 (424)
... .++..++|.+ +.. .+++++.|+.+.++-...
T Consensus 297 --------------~~~----~~~~~~~~~~~~~~~~-~l~~~~~d~~~~~~~~~~ 333 (343)
T 3lrv_A 297 --------------WTK----DEESALCLQSDTADFT-DMDVVCGDGGIAAILKTN 333 (343)
T ss_dssp --------------EEE----EEEEECCC----CCCC-EEEEEEETTEEEEEEECS
T ss_pred --------------eEe----cCceeEecCccccccc-eeEEEecCCceEEEEecC
Confidence 111 3466777887 777 577778888888875543
No 120
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.96 E-value=5.4e-27 Score=221.80 Aligned_cols=243 Identities=11% Similarity=0.125 Sum_probs=191.3
Q ss_pred ccCCceeEEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCCeeeEEecCCCCceEEEEeCCCc
Q 014472 123 NHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDDAQ 202 (424)
Q Consensus 123 ~h~~~v~~i~~~p~~~~~latg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~ 202 (424)
.|.+.|.+++|+|++. ++++++.++.|++||+.. ......+..|...+.+++|+|++..++++++.|+.
T Consensus 167 ~~~~~v~~~~~~~~~~-~~~s~~~d~~v~~~d~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 235 (433)
T 3bws_A 167 KKLGFVETISIPEHNE-LWVSQMQANAVHVFDLKT----------LAYKATVDLTGKWSKILLYDPIRDLVYCSNWISED 235 (433)
T ss_dssp TTCCEEEEEEEGGGTE-EEEEEGGGTEEEEEETTT----------CCEEEEEECSSSSEEEEEEETTTTEEEEEETTTTE
T ss_pred ccCCceeEEEEcCCCE-EEEEECCCCEEEEEECCC----------ceEEEEEcCCCCCeeEEEEcCCCCEEEEEecCCCc
Confidence 5788999999998775 899999999999999976 45566777899999999999998854466668999
Q ss_pred EEEEeCCCCCCCCcccceeeeecCCcceeeEEeeCCCCcEEEEEe--------CCCeEEEEECCCCCCCCCeeEecccCC
Q 014472 203 ICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVG--------DDQYLLIWDLRTPSVSKPVQSVVAHQS 274 (424)
Q Consensus 203 i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~~s~~--------~dg~i~i~d~~~~~~~~~~~~~~~~~~ 274 (424)
|++||+.++. .+..+.. ...+.+++|+|+++.++ +++ .||.|++||+++++. +.. ..|..
T Consensus 236 i~~~d~~~~~------~~~~~~~-~~~~~~~~~~~~g~~l~-~~~~~~~~~~~~dg~i~~~d~~~~~~---~~~-~~~~~ 303 (433)
T 3bws_A 236 ISVIDRKTKL------EIRKTDK-IGLPRGLLLSKDGKELY-IAQFSASNQESGGGRLGIYSMDKEKL---IDT-IGPPG 303 (433)
T ss_dssp EEEEETTTTE------EEEECCC-CSEEEEEEECTTSSEEE-EEEEESCTTCSCCEEEEEEETTTTEE---EEE-EEEEE
T ss_pred EEEEECCCCc------EEEEecC-CCCceEEEEcCCCCEEE-EEECCCCccccCCCeEEEEECCCCcE---Eee-ccCCC
Confidence 9999998652 2333333 45689999999998665 444 588999999987653 332 34566
Q ss_pred CeeEEEecCCCCeEEEEEeCCCcEEEEECCCCCCcceeecCCCCCEEEEEEcCCCCcEEEEEeC---------------C
Q 014472 275 EVNCLAFNPFNEWILATGSTDKTVKLFDLRKISTALHTFDSHKEEVFQVGWNPKNETILASCCL---------------G 339 (424)
Q Consensus 275 ~v~~i~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~s~~~---------------d 339 (424)
.+.+++|+|+++.++++++.++.|++||+++ ++.+..+. +...+.+++|+|+++ +|++++. |
T Consensus 304 ~~~~~~~~~~g~~l~~~~~~~~~v~v~d~~~-~~~~~~~~-~~~~~~~~~~s~dg~-~l~~~~~~~~~~~~~~~~~g~~d 380 (433)
T 3bws_A 304 NKRHIVSGNTENKIYVSDMCCSKIEVYDLKE-KKVQKSIP-VFDKPNTIALSPDGK-YLYVSCRGPNHPTEGYLKKGLVL 380 (433)
T ss_dssp CEEEEEECSSTTEEEEEETTTTEEEEEETTT-TEEEEEEE-CSSSEEEEEECTTSS-EEEEEECCCCCTTTCTTSCCSSC
T ss_pred CcceEEECCCCCEEEEEecCCCEEEEEECCC-CcEEEEec-CCCCCCeEEEcCCCC-EEEEEecCCCccccccccccccc
Confidence 8999999999988888889999999999997 56666665 678899999999997 4555554 5
Q ss_pred CeEEEeeCCCCCcccCCCccCCCCCeeeEEEcCCCCCcceEEeCCCCCcEEEEEeCCCcEEEEecCC
Q 014472 340 RRLMVWDLSRIDEEQTPEDAEDGPPELLFIHGGHTSKISDFSWNPCEDWVISSVAEDNILQIWQMAE 406 (424)
Q Consensus 340 g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iw~~~~ 406 (424)
|.|++||+.++ +.+..+.. ...+.+++|+|++++++++++.|+.|++|++..
T Consensus 381 g~v~~~d~~~~--------------~~~~~~~~-~~~~~~~~~s~dg~~l~~~~~~d~~i~v~~~~~ 432 (433)
T 3bws_A 381 GKVYVIDTTTD--------------TVKEFWEA-GNQPTGLDVSPDNRYLVISDFLDHQIRVYRRDG 432 (433)
T ss_dssp CEEEEEETTTT--------------EEEEEEEC-SSSEEEEEECTTSCEEEEEETTTTEEEEEEETT
T ss_pred eEEEEEECCCC--------------cEEEEecC-CCCCceEEEcCCCCEEEEEECCCCeEEEEEecC
Confidence 79999999874 44444444 346899999999995444444699999999863
No 121
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.96 E-value=3.9e-27 Score=222.78 Aligned_cols=255 Identities=9% Similarity=0.053 Sum_probs=201.3
Q ss_pred CcEEEEEEeccCCceeEEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcE-----EEecCCCCeeeEEecC
Q 014472 114 GKVQIIQQINHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDL-----RLRGHSTEGYGLSWSK 188 (424)
Q Consensus 114 ~~~~~~~~~~h~~~v~~i~~~p~~~~~latg~~dg~v~iwd~~~~~~~~~~~~~~~~~~-----~~~~h~~~v~~l~~~~ 188 (424)
+.++....+.+...+.+++|+| +..++++++.++.|++||+.+ ..... .+.+|...|.+++|++
T Consensus 111 ~~~~~~~~~~~~~~~~~~~~s~-~~~~~~~~~~~~~i~~~d~~~----------g~~~~~~~~~~~~~~~~~v~~~~~~~ 179 (433)
T 3bws_A 111 ITHRFISRFKTGFQPKSVRFID-NTRLAIPLLEDEGMDVLDINS----------GQTVRLSPPEKYKKKLGFVETISIPE 179 (433)
T ss_dssp CSEEEEEEEECSSCBCCCEESS-SSEEEEEBTTSSSEEEEETTT----------CCEEEECCCHHHHTTCCEEEEEEEGG
T ss_pred CcceEEEEEcCCCCceEEEEeC-CCeEEEEeCCCCeEEEEECCC----------CeEeeecCcccccccCCceeEEEEcC
Confidence 4667777787778888999999 556888888899999999886 22222 3457888999999998
Q ss_pred CCCceEEEEeCCCcEEEEeCCCCCCCCcccceeeeecCCcceeeEEeeCCCCcEEEEEeCCCeEEEEECCCCCCCCCeeE
Q 014472 189 FKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQS 268 (424)
Q Consensus 189 ~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~~s~~~dg~i~i~d~~~~~~~~~~~~ 268 (424)
++. ++++++.|+.|++||+.++. .+..+..|...+.+++|+|+++.++++++.++.|++||+++++. +..
T Consensus 180 ~~~-~~~s~~~d~~v~~~d~~~~~------~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~---~~~ 249 (433)
T 3bws_A 180 HNE-LWVSQMQANAVHVFDLKTLA------YKATVDLTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTKLE---IRK 249 (433)
T ss_dssp GTE-EEEEEGGGTEEEEEETTTCC------EEEEEECSSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTTEE---EEE
T ss_pred CCE-EEEEECCCCEEEEEECCCce------EEEEEcCCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCcE---EEE
Confidence 776 79999999999999997652 34556678889999999999988877877899999999987653 444
Q ss_pred ecccCCCeeEEEecCCCCeEEEEEe--------CCCcEEEEECCCCCCcceeecCCCCCEEEEEEcCCCCcEEEEEeCCC
Q 014472 269 VVAHQSEVNCLAFNPFNEWILATGS--------TDKTVKLFDLRKISTALHTFDSHKEEVFQVGWNPKNETILASCCLGR 340 (424)
Q Consensus 269 ~~~~~~~v~~i~~~~~~~~~l~~g~--------~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~s~~~dg 340 (424)
+.. ...+.+++|+|++.. +++++ .||.|++||+++ ++.+..+ .|...+.+++|+|+++.++++++.|+
T Consensus 250 ~~~-~~~~~~~~~~~~g~~-l~~~~~~~~~~~~~dg~i~~~d~~~-~~~~~~~-~~~~~~~~~~~~~~g~~l~~~~~~~~ 325 (433)
T 3bws_A 250 TDK-IGLPRGLLLSKDGKE-LYIAQFSASNQESGGGRLGIYSMDK-EKLIDTI-GPPGNKRHIVSGNTENKIYVSDMCCS 325 (433)
T ss_dssp CCC-CSEEEEEEECTTSSE-EEEEEEESCTTCSCCEEEEEEETTT-TEEEEEE-EEEECEEEEEECSSTTEEEEEETTTT
T ss_pred ecC-CCCceEEEEcCCCCE-EEEEECCCCccccCCCeEEEEECCC-CcEEeec-cCCCCcceEEECCCCCEEEEEecCCC
Confidence 433 456999999999985 55665 588999999997 4555444 45668999999999987788889999
Q ss_pred eEEEeeCCCCCcccCCCccCCCCCeeeEEEcCCCCCcceEEeCCCCCcEEEEEeC---------------CCcEEEEecC
Q 014472 341 RLMVWDLSRIDEEQTPEDAEDGPPELLFIHGGHTSKISDFSWNPCEDWVISSVAE---------------DNILQIWQMA 405 (424)
Q Consensus 341 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~---------------d~~i~iw~~~ 405 (424)
.|++||+..+ +.+..+. +...+.+++|+|++++ +++++. ||.|++||+.
T Consensus 326 ~v~v~d~~~~--------------~~~~~~~-~~~~~~~~~~s~dg~~-l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~ 389 (433)
T 3bws_A 326 KIEVYDLKEK--------------KVQKSIP-VFDKPNTIALSPDGKY-LYVSCRGPNHPTEGYLKKGLVLGKVYVIDTT 389 (433)
T ss_dssp EEEEEETTTT--------------EEEEEEE-CSSSEEEEEECTTSSE-EEEEECCCCCTTTCTTSCCSSCCEEEEEETT
T ss_pred EEEEEECCCC--------------cEEEEec-CCCCCCeEEEcCCCCE-EEEEecCCCccccccccccccceEEEEEECC
Confidence 9999999864 3333433 5667999999999995 555554 5799999998
Q ss_pred CCCC
Q 014472 406 ENIY 409 (424)
Q Consensus 406 ~~~~ 409 (424)
++..
T Consensus 390 ~~~~ 393 (433)
T 3bws_A 390 TDTV 393 (433)
T ss_dssp TTEE
T ss_pred CCcE
Confidence 7643
No 122
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.96 E-value=1.5e-27 Score=224.40 Aligned_cols=242 Identities=13% Similarity=0.086 Sum_probs=180.0
Q ss_pred eccCCceeEEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCC-----CeeeEEecCCCCceEEE
Q 014472 122 INHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHST-----EGYGLSWSKFKEGHLLS 196 (424)
Q Consensus 122 ~~h~~~v~~i~~~p~~~~~latg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~h~~-----~v~~l~~~~~~~~~l~s 196 (424)
+.|...|.+++|+|+|. +||+++.||.|+||+... ....+. |.. .+.+++|+|+|+ +|++
T Consensus 82 ~~~~~~V~~vawSPdG~-~LAs~s~dg~V~iwd~~~------------~l~~l~-~~~~~~~~sv~svafSPDG~-~LAs 146 (588)
T 2j04_A 82 SQPVCYPRVCKPSPIDD-WMAVLSNNGNVSVFKDNK------------MLTNLD-SKGNLSSRTYHCFEWNPIES-SIVV 146 (588)
T ss_dssp TSCSCCEEEEEECSSSS-CEEEEETTSCEEEEETTE------------EEEECC-CSSCSTTTCEEEEEECSSSS-CEEE
T ss_pred cCCCCcEEEEEECCCCC-EEEEEeCCCcEEEEeCCc------------eeeecc-CCCccccccEEEEEEcCCCC-EEEE
Confidence 36788999999999997 899999999999999543 233344 554 599999999998 7999
Q ss_pred EeCCCcEEEEeCCCCCCCC-cccceeee----ecCCcceeeEEeeCCCCcEEEEEeCCCeEEEEECCCCCCCCCeeEe-c
Q 014472 197 GSDDAQICLWDINAAPKNK-SLEAMQIF----KVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSV-V 270 (424)
Q Consensus 197 ~~~dg~i~vwd~~~~~~~~-~~~~~~~~----~~~~~~v~~i~~~~~~~~~~~s~~~dg~i~i~d~~~~~~~~~~~~~-~ 270 (424)
|+.||+|++||+.++.... .+-.+..+ .+|...|.+++|+|++ +++++.|++|++||+..+........+ .
T Consensus 147 gs~DGtVkIWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg---Laass~D~tVrlWd~~~~~~~~~~~tL~~ 223 (588)
T 2j04_A 147 GNEDGELQFFSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV---LVAALSNNSVFSMTVSASSHQPVSRMIQN 223 (588)
T ss_dssp EETTSEEEEEECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE---EEEEETTCCEEEECCCSSSSCCCEEEEEC
T ss_pred EcCCCEEEEEECCCCccccccceeeeeeecccccccccEEEEEEcCCc---EEEEeCCCeEEEEECCCCccccceeeecc
Confidence 9999999999998763211 10123443 5678899999999998 568889999999999886632234455 4
Q ss_pred ccCCCeeEEEecCCCCeEEEEEeCCCcEEEEECCCCCCcceeecCCCCCEEEEEE--cCCCCcEEEEEeCCCeEEEeeCC
Q 014472 271 AHQSEVNCLAFNPFNEWILATGSTDKTVKLFDLRKISTALHTFDSHKEEVFQVGW--NPKNETILASCCLGRRLMVWDLS 348 (424)
Q Consensus 271 ~~~~~v~~i~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~--sp~~~~~l~s~~~dg~i~iwd~~ 348 (424)
+|...|.+++|+ +. .||+++ +++|++||+.. +.......+|...|..++| +|++. .|++++.||+ ++|...
T Consensus 224 ~h~~~V~svaFs--g~-~LASa~-~~tIkLWd~~~-~~~~~~~~gh~~~V~~va~~~s~d~~-~La~a~edG~-klw~~d 296 (588)
T 2j04_A 224 ASRRKITDLKIV--DY-KVVLTC-PGYVHKIDLKN-YSISSLKTGSLENFHIIPLNHEKEST-ILLMSNKTSY-KVLLED 296 (588)
T ss_dssp CCSSCCCCEEEE--TT-EEEEEC-SSEEEEEETTT-TEEEEEECSCCSCCCEEEETTCSSCE-EEEECSSCEE-EEEESS
T ss_pred cccCcEEEEEEE--CC-EEEEEe-CCeEEEEECCC-CeEEEEEcCCCceEEEEEeeeCCCCC-EEEEEcCCCC-EEEeec
Confidence 788999999999 55 688887 69999999997 4442333379999999999 99994 7999999999 999985
Q ss_pred CCCcccCCCc-------------cCCCCCeeeEEEcCCCCCcceEEeCCCCCcEEEEEe
Q 014472 349 RIDEEQTPED-------------AEDGPPELLFIHGGHTSKISDFSWNPCEDWVISSVA 394 (424)
Q Consensus 349 ~~~~~~~~~~-------------~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~ 394 (424)
... ..... ...+. .+..+.+ ...|++++|+|+|+ ++|+++
T Consensus 297 ~~~--~spd~~l~a~~d~~v~lW~~~g~--~l~~~~~-~~~I~~va~SPdG~-~lA~~~ 349 (588)
T 2j04_A 297 ELH--VTADNIIAPYLEKKFKKWSTIWN--EFNNYET-TLVIHGISLSPDGY-SIAIVY 349 (588)
T ss_dssp SEE--EECCCSSHHHHHHHHHHTTTTTT--SSSSSCC-EEEEEEEEECTTSS-EEEEEE
T ss_pred cEE--ECCCceEEEEcCCEEEEEECCCC--ceeeecc-ceEEEEEEECCCCC-EEEEEE
Confidence 311 00000 00011 1112222 44589999999999 788776
No 123
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.96 E-value=6.7e-28 Score=225.09 Aligned_cols=278 Identities=15% Similarity=0.139 Sum_probs=177.3
Q ss_pred cCCceeEEEe---cCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCCeeeEEecC------------
Q 014472 124 HDGEVNRARY---MPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSK------------ 188 (424)
Q Consensus 124 h~~~v~~i~~---~p~~~~~latg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~------------ 188 (424)
-+....++.| .|+...++++|. ++.|.+|+............... ......+...+..+.|++
T Consensus 14 l~~~p~~~~w~~~~~~~~~l~a~g~-~~~i~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (393)
T 4gq1_A 14 LNVRPYTTTWCSQSPSCSNLLAIGH-DTGITIYCASEEQTPGSTGLTLQ-ELFTIQTGLPTLHLSFSSSCSYSENLHDGD 91 (393)
T ss_dssp TTCCEEEEEECTTSGGGTTEEEEEE-SSEEEEEEEEECCSSSCCSEEEE-EEEEEECSSCEEEEEECTTCEEECC-----
T ss_pred CCCCCeEEEEeCCCCCCCCEEEEEC-CCCEEEEECCCCCccccccccee-eeEEEecCCCeeeEeecCCccccccccCCC
Confidence 3445556666 345566777665 77899998754211110000000 011122344444444442
Q ss_pred -------CCCceEEEEeCCCcEEEEeCCCCCCCCcccceeeeecCCcceeeEEeeC--------CCCcEEEEEeCCCeEE
Q 014472 189 -------FKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHL--------RHEYLFGSVGDDQYLL 253 (424)
Q Consensus 189 -------~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~--------~~~~~~~s~~~dg~i~ 253 (424)
....+|++|+.|++|+|||++.+... ....+..+.+|.+.|++++|+| ++ .+||+|+.|++|+
T Consensus 92 ~~~~~~~~~~~~las~~~d~~v~lw~~~~~~~~-~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~-~~las~s~D~tv~ 169 (393)
T 4gq1_A 92 GNVNSSPVYSLFLACVCQDNTVRLIITKNETII-TQHVLGGKSGHHNFVNDIDIADVYSADNRLAE-QVIASVGDDCTLI 169 (393)
T ss_dssp -----CCEEEEEEEEEETTSCEEEEEEETTEEE-EEEEECTTTSCSSCEEEEEEEEEECTTCSEEE-EEEEEEETTSEEE
T ss_pred cceeecCCCCCEEEEEeCCCcEEEEECCCCccc-eeeeecccCCCCCceEEEEEccccccccCCCC-CEEEEEECCCeEE
Confidence 22337999999999999999876321 1123455788999999999998 44 5889999999999
Q ss_pred EEECCCCCCCCCeeEecccCCCeeEEEecCCCCeEEEEEeCCCcEEEEECCCCCCcc-----------------------
Q 014472 254 IWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATGSTDKTVKLFDLRKISTAL----------------------- 310 (424)
Q Consensus 254 i~d~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~----------------------- 310 (424)
|||+++... +..+..|..+|.+++|+|++..+|++|+.||+|++||+++.....
T Consensus 170 ~Wd~~~~~~---~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~ 246 (393)
T 4gq1_A 170 IWRLTDEGP---ILAGYPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPLVN 246 (393)
T ss_dssp EEEEETTEE---EEEEEECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC----------CSCCCSEEEESGGGC-
T ss_pred EEECCCCce---eeeecCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCCcccceEEeccccccee
Confidence 999987553 666678899999999999987789999999999999998732111
Q ss_pred -eeecCCCCCEEEEEEc-CCCCcEEEEEeCCCeEEEeeCCCCCcccCCCccCCC-----CCeeeEEEcCCCCCcceEEeC
Q 014472 311 -HTFDSHKEEVFQVGWN-PKNETILASCCLGRRLMVWDLSRIDEEQTPEDAEDG-----PPELLFIHGGHTSKISDFSWN 383 (424)
Q Consensus 311 -~~~~~~~~~v~~~~~s-p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~-----~~~~~~~~~~h~~~v~~~~~~ 383 (424)
....+|...+.++.|+ |++. .|++++.|+.+++||+............... ..........+...+..+.+.
T Consensus 247 ~~~~~~~~~~v~~v~~~~~dg~-~l~s~s~d~~i~vwd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (393)
T 4gq1_A 247 TCHSSGIASSLANVRWIGSDGS-GILAMCKSGAWLRWNLFANNDYNEISDSTMKLGPKNLLPNVQGISLFPSLLGACPHP 325 (393)
T ss_dssp -----CCSSSCSEEEEETTTTC-EEEEECTTSEEEEEEC-------------------CCSCSEEEECSSCCSSCCEECS
T ss_pred eeecccccccceeeeeecCCCC-EEEEEeCCCCEEEEECccCCCCceEeeecCccccEEEccccccccccCcceeEEEcc
Confidence 1123577889999997 6775 7999999999999999876543222111000 001122223333333333444
Q ss_pred CCCCcEEEEEeCCCcEEEEecCCCCC
Q 014472 384 PCEDWVISSVAEDNILQIWQMAENIY 409 (424)
Q Consensus 384 ~~~~~~l~s~~~d~~i~iw~~~~~~~ 409 (424)
+.+..++++|+.||.|+|||+.++..
T Consensus 326 ~~~~~~~~sgs~Dg~V~lwd~~~~~~ 351 (393)
T 4gq1_A 326 RYMDYFATAHSQHGLIQLINTYEKDS 351 (393)
T ss_dssp SCTTEEEEEETTTTEEEEEETTCTTC
T ss_pred CCCCEEEEEECCCCEEEEEECCCCcE
Confidence 44555678888999999999987744
No 124
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=99.96 E-value=1.9e-26 Score=212.71 Aligned_cols=254 Identities=19% Similarity=0.186 Sum_probs=187.1
Q ss_pred CccEEEEccCCCCCCCCCCceEEEEEeecCCCCCCCeEEEEEEEcCCCCCCcccCCCCCcCCCCCCCCCCCCcEEEEEEe
Q 014472 43 PSLTVEWLPDREEPPGKDYSVQKMILGTHTSENEPNYLMLAQVQLPLDDSENDARHYDDDRSDFGGFGCANGKVQIIQQI 122 (424)
Q Consensus 43 p~~~~~~~p~~~~~~~~~~~~~~~~~gt~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 122 (424)
+..+++|.|+... ...++.|+ .+..|+++.+.-. +........
T Consensus 41 ~v~~~~~~~~~~~-------g~~l~~~~-----~dg~i~iw~~~~~-------------------------~~~~~~~~~ 83 (368)
T 3mmy_A 41 SIGCLSFSPPTLP-------GNFLIAGS-----WANDVRCWEVQDS-------------------------GQTIPKAQQ 83 (368)
T ss_dssp CEEEEEECCTTSS-------SEEEEEEE-----TTSEEEEEEECTT-------------------------SCEEEEEEE
T ss_pred ceEEEEEcCCCCC-------ceEEEEEC-----CCCcEEEEEcCCC-------------------------CceeEEEec
Confidence 4678888887411 15666665 3457888877310 122223445
Q ss_pred ccCCceeEEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCCeeeEEe--cCCCCceEEEEeCC
Q 014472 123 NHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSW--SKFKEGHLLSGSDD 200 (424)
Q Consensus 123 ~h~~~v~~i~~~p~~~~~latg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~--~~~~~~~l~s~~~d 200 (424)
.|.+.|++++|+|++. +|++|+.||.|++||+.. .. ...+.+|...|.+++| ++++. +|++++.|
T Consensus 84 ~h~~~v~~~~~~~~~~-~l~s~~~dg~v~iwd~~~----------~~-~~~~~~~~~~v~~~~~~~~~~~~-~l~~~~~d 150 (368)
T 3mmy_A 84 MHTGPVLDVCWSDDGS-KVFTASCDKTAKMWDLSS----------NQ-AIQIAQHDAPVKTIHWIKAPNYS-CVMTGSWD 150 (368)
T ss_dssp ECSSCEEEEEECTTSS-EEEEEETTSEEEEEETTT----------TE-EEEEEECSSCEEEEEEEECSSCE-EEEEEETT
T ss_pred cccCCEEEEEECcCCC-EEEEEcCCCcEEEEEcCC----------CC-ceeeccccCceEEEEEEeCCCCC-EEEEccCC
Confidence 7999999999999886 899999999999999987 22 3446779999999999 78776 79999999
Q ss_pred CcEEEEeCCCCCCCCcccce-----------------------------------eeeecCCcceeeEEeeCCCC---cE
Q 014472 201 AQICLWDINAAPKNKSLEAM-----------------------------------QIFKVHEGVVEDVAWHLRHE---YL 242 (424)
Q Consensus 201 g~i~vwd~~~~~~~~~~~~~-----------------------------------~~~~~~~~~v~~i~~~~~~~---~~ 242 (424)
|.|++||++++.....+... .....+...+.++.+.+... ..
T Consensus 151 g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (368)
T 3mmy_A 151 KTLKFWDTRSSNPMMVLQLPERCYCADVIYPMAVVATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTG 230 (368)
T ss_dssp SEEEEECSSCSSCSEEEECSSCEEEEEEETTEEEEEEGGGCEEEEECSSSCEEEEECCCSCSSCEEEEEEEECTTSCEEE
T ss_pred CcEEEEECCCCcEEEEEecCCCceEEEecCCeeEEEeCCCcEEEEEeccccchhhhccccccCCCceEEEcccCCCCCCe
Confidence 99999999877543222100 00001223344555544432 23
Q ss_pred EEEEeCCCeEEEEECCCCCCCCCeeEecccCC------------CeeEEEecCCCCeEEEEEeCCCcEEEEECCCCCCcc
Q 014472 243 FGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQS------------EVNCLAFNPFNEWILATGSTDKTVKLFDLRKISTAL 310 (424)
Q Consensus 243 ~~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~------------~v~~i~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~ 310 (424)
+++++.||.|++||++.......+..+..|.. .|++++|+|++. +|++|+.||.|++||+++ +.++
T Consensus 231 ~~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~-~l~s~~~dg~i~iwd~~~-~~~~ 308 (368)
T 3mmy_A 231 FALGSIEGRVAIHYINPPNPAKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVHG-TLATVGSDGRFSFWDKDA-RTKL 308 (368)
T ss_dssp EEEEETTSEEEEEESSCSCHHHHSEEEECSEEC----CCCEEECCEEEEEECTTTC-CEEEEETTSCEEEEETTT-TEEE
T ss_pred EEEecCCCcEEEEecCCCCccccceeeeeeecccccccccccccceEEEEEecCCC-EEEEEccCCeEEEEECCC-CcEE
Confidence 67999999999999988642234555666655 799999999998 589999999999999998 7888
Q ss_pred eeecCCCCCEEEEEEcCCCCcEEEEEeCCCeEEEeeCCC
Q 014472 311 HTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSR 349 (424)
Q Consensus 311 ~~~~~~~~~v~~~~~sp~~~~~l~s~~~dg~i~iwd~~~ 349 (424)
..+..|...|.+++|+|++. +|++++.|+..+.|++..
T Consensus 309 ~~~~~~~~~v~~~~~s~~g~-~l~~~s~d~~~~~~~~~~ 346 (368)
T 3mmy_A 309 KTSEQLDQPISACCFNHNGN-IFAYASSYDWSKGHEFYN 346 (368)
T ss_dssp EECCCCSSCEEEEEECTTSS-CEEEEECCCSTTCGGGCC
T ss_pred EEecCCCCCceEEEECCCCC-eEEEEecccccccccccC
Confidence 99999999999999999996 688998888666666543
No 125
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.96 E-value=3e-26 Score=213.67 Aligned_cols=231 Identities=13% Similarity=0.091 Sum_probs=182.5
Q ss_pred cEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCCeeeEEecCCCCceEEEEeCCCcEEEEeCCCCCCCCccc
Q 014472 139 FLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLE 218 (424)
Q Consensus 139 ~~latg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~ 218 (424)
.++++++.++.|++||+.. .+....+..|. .+.+++|+|++..++++++.|+.|++||+.+++
T Consensus 3 ~l~vs~~~d~~v~v~d~~~----------~~~~~~~~~~~-~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~------ 65 (391)
T 1l0q_A 3 FAYIANSESDNISVIDVTS----------NKVTATIPVGS-NPMGAVISPDGTKVYVANAHSNDVSIIDTATNN------ 65 (391)
T ss_dssp EEEEEETTTTEEEEEETTT----------TEEEEEEECSS-SEEEEEECTTSSEEEEEEGGGTEEEEEETTTTE------
T ss_pred EEEEEcCCCCEEEEEECCC----------CeEEEEeecCC-CcceEEECCCCCEEEEECCCCCeEEEEECCCCe------
Confidence 5789999999999999987 34455666554 589999999998545788899999999997763
Q ss_pred ceeeeecCCcceeeEEeeCCCCcEEEEEeCCCeEEEEECCCCCCCCCeeEecccCCCeeEEEecCCCCeEEEEEeCCCcE
Q 014472 219 AMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATGSTDKTV 298 (424)
Q Consensus 219 ~~~~~~~~~~~v~~i~~~~~~~~~~~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~l~~g~~dg~i 298 (424)
.+..+..+ ..+.+++|+|+++.++++++.++.|++||+.+++. +..+. +...+.+++|+|+++.++++++.++.|
T Consensus 66 ~~~~~~~~-~~v~~~~~spdg~~l~~~~~~~~~v~v~d~~~~~~---~~~~~-~~~~~~~~~~s~dg~~l~~~~~~~~~v 140 (391)
T 1l0q_A 66 VIATVPAG-SSPQGVAVSPDGKQVYVTNMASSTLSVIDTTSNTV---AGTVK-TGKSPLGLALSPDGKKLYVTNNGDKTV 140 (391)
T ss_dssp EEEEEECS-SSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEE---EEEEE-CSSSEEEEEECTTSSEEEEEETTTTEE
T ss_pred EEEEEECC-CCccceEECCCCCEEEEEECCCCEEEEEECCCCeE---EEEEe-CCCCcceEEECCCCCEEEEEeCCCCEE
Confidence 33444433 48999999999998877877889999999998653 44444 455789999999999766889899999
Q ss_pred EEEECCCCCCcceeecCCCCCEEEEEEcCCCCcEEEEEeCCCeEEEeeCCCCCcccCCCccCCCCCeeeEEEcCCCCCcc
Q 014472 299 KLFDLRKISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPEDAEDGPPELLFIHGGHTSKIS 378 (424)
Q Consensus 299 ~iwd~~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~ 378 (424)
++||+++ ++.+..+..+ ..+.+++|+|+++.++++++.++.|++||++.. +...... +...+.
T Consensus 141 ~~~d~~~-~~~~~~~~~~-~~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~~--------------~~~~~~~-~~~~~~ 203 (391)
T 1l0q_A 141 SVINTVT-KAVINTVSVG-RSPKGIAVTPDGTKVYVANFDSMSISVIDTVTN--------------SVIDTVK-VEAAPS 203 (391)
T ss_dssp EEEETTT-TEEEEEEECC-SSEEEEEECTTSSEEEEEETTTTEEEEEETTTT--------------EEEEEEE-CSSEEE
T ss_pred EEEECCC-CcEEEEEecC-CCcceEEECCCCCEEEEEeCCCCEEEEEECCCC--------------eEEEEEe-cCCCcc
Confidence 9999987 6667777654 567999999999866678889999999999874 3333333 345789
Q ss_pred eEEeCCCCCcEEEEEe--CCCcEEEEecCCCC
Q 014472 379 DFSWNPCEDWVISSVA--EDNILQIWQMAENI 408 (424)
Q Consensus 379 ~~~~~~~~~~~l~s~~--~d~~i~iw~~~~~~ 408 (424)
+++|+|+++++++++. .++.|++||+.++.
T Consensus 204 ~~~~~~~g~~l~~~~~~~~~~~v~~~d~~~~~ 235 (391)
T 1l0q_A 204 GIAVNPEGTKAYVTNVDKYFNTVSMIDTGTNK 235 (391)
T ss_dssp EEEECTTSSEEEEEEECSSCCEEEEEETTTTE
T ss_pred ceEECCCCCEEEEEecCcCCCcEEEEECCCCe
Confidence 9999999995444443 78999999998763
No 126
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.95 E-value=5.5e-27 Score=207.46 Aligned_cols=199 Identities=12% Similarity=0.135 Sum_probs=145.0
Q ss_pred cCCceeEEEecCC----CCcEEEEEe--------------------cCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCC
Q 014472 124 HDGEVNRARYMPQ----NPFLIATKT--------------------VSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHST 179 (424)
Q Consensus 124 h~~~v~~i~~~p~----~~~~latg~--------------------~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~h~~ 179 (424)
|.+.|++++|+|+ ++ .+++++ .|+.|++|++.. ..+....+.+|..
T Consensus 110 ~~~~v~sla~spd~~~~~~-~l~s~g~~~~v~~l~~g~lv~ss~~g~d~~V~~~~~s~---------dG~~~~s~~~~~~ 179 (356)
T 2w18_A 110 EIREIRALFCSSDDESEKQ-VLLKSGNIKAVLGLTKRRLVSSSGTLSDQQVEVMTFAE---------DGGGKENQFLMPP 179 (356)
T ss_dssp SEEEEEEECC------CCE-EEEEEEEEEEEEEETTTEEEEEESSSTTCEEEEEEECT---------TSCEEEEEEECCC
T ss_pred cccceEEEEECCCcccccc-EEEeCCCeEEEEecCCCcEEEecccCCCCcEEEEEECC---------CCceeeeeccCCC
Confidence 3457777777777 54 444433 388888888854 1344567778999
Q ss_pred CeeeEEecC---CCCceEEEEeCCCcEEEEeCCCCCCCCcccceeeeecCC---cceeeEEeeCCCCcE-----------
Q 014472 180 EGYGLSWSK---FKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHE---GVVEDVAWHLRHEYL----------- 242 (424)
Q Consensus 180 ~v~~l~~~~---~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~---~~v~~i~~~~~~~~~----------- 242 (424)
.+..++|++ ++. +|++|+.|++|+|||+.+++ .+..+.+|. ..+.+++|+|++..+
T Consensus 180 ~v~~l~fs~~~g~~~-~LaSgS~D~TIkIWDl~TGk------~l~tL~g~~~~v~~v~~vafSpdG~~lvs~s~~~~~w~ 252 (356)
T 2w18_A 180 EETILTFAEVQGMQE-ALLGTTIMNNIVIWNLKTGQ------LLKKMHIDDSYQASVCHKAYSEMGLLFIVLSHPCAKES 252 (356)
T ss_dssp SSCEEEEEEEETSTT-EEEEEETTSEEEEEETTTCC------EEEEEECCC---CCCEEEEEEETTEEEEEEC-------
T ss_pred ceeeEEeeccCCCCc-eEEEecCCCcEEEEECCCCc------EEEEEcCCCcceeeeEEEEECCCCCEEEEeccCCCcce
Confidence 999999998 445 79999999999999999874 445555543 357777999998754
Q ss_pred EEEEeCCCeEEEEECCCCCCCCCeeEe-----cccCCCeeEEEecCCCCeEEEEEeCCCcEEEEECCCCCCcceeecCCC
Q 014472 243 FGSVGDDQYLLIWDLRTPSVSKPVQSV-----VAHQSEVNCLAFNPFNEWILATGSTDKTVKLFDLRKISTALHTFDSHK 317 (424)
Q Consensus 243 ~~s~~~dg~i~i~d~~~~~~~~~~~~~-----~~~~~~v~~i~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~ 317 (424)
+++|+.|++|++||..++.. +..+ .+|...+.+.+++ +. ++|+|+.|++|+|||+++ ++.+.++.+|.
T Consensus 253 laSGs~D~tIklWd~~tgk~---l~v~~~~~p~Gh~~~~lsg~~s--g~-~lASgS~DgTIkIWDl~t-Gk~l~tL~gH~ 325 (356)
T 2w18_A 253 ESLRSPVFQLIVINPKTTLS---VGVMLYCLPPGQAGRFLEGDVK--DH-CAAAILTSGTIAIWDLLL-GQCTALLPPVS 325 (356)
T ss_dssp -----CCEEEEEEETTTTEE---EEEEEECCCTTCCCCEEEEEEE--TT-EEEEEETTSCEEEEETTT-CSEEEEECCC-
T ss_pred eeccCCCcEEEEEECCCCEE---EEEEEeeccCCCcceeEccccC--CC-EEEEEcCCCcEEEEECCC-CcEEEEecCCC
Confidence 36788999999999988653 3322 3555555555554 54 799999999999999998 78999999988
Q ss_pred CCEE-EEEEcCCCCcEEEEEeCCCeEEEeeC
Q 014472 318 EEVF-QVGWNPKNETILASCCLGRRLMVWDL 347 (424)
Q Consensus 318 ~~v~-~~~~sp~~~~~l~s~~~dg~i~iwd~ 347 (424)
..+. +++|+|+++ +|++|+.|++|+|||+
T Consensus 326 ~~vvs~vafSPDG~-~LaSGS~D~TIklWd~ 355 (356)
T 2w18_A 326 DQHWSFVKWSGTDS-HLLAGQKDGNIFVYHY 355 (356)
T ss_dssp -CCCCEEEECSSSS-EEEEECTTSCEEEEEE
T ss_pred CCeEEEEEECCCCC-EEEEEECCCcEEEecC
Confidence 7655 589999996 7999999999999985
No 127
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.95 E-value=1.2e-24 Score=199.53 Aligned_cols=297 Identities=8% Similarity=0.061 Sum_probs=206.8
Q ss_pred eEEEEEeecCCCCCCCeEEEEEEEcCCCCCCcccCCCCCcCCCCCCCCCCCCcEEEEEEeccCCceeEEEecCCCCcEEE
Q 014472 63 VQKMILGTHTSENEPNYLMLAQVQLPLDDSENDARHYDDDRSDFGGFGCANGKVQIIQQINHDGEVNRARYMPQNPFLIA 142 (424)
Q Consensus 63 ~~~~~~gt~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~~p~~~~~la 142 (424)
.+++++|+++.+ ....++++.++.. .+++..+....+...+..++|+|+++ +++
T Consensus 2 ~~~~~vg~y~~~-~~~~i~v~~~d~~------------------------tg~~~~~~~~~~~~~p~~~a~spdg~-l~~ 55 (347)
T 3hfq_A 2 QERILFGTYTKK-TSQGIYQGTLDTT------------------------AKTLTNDGLLAATQNPTYLALSAKDC-LYS 55 (347)
T ss_dssp EEEEEEEECCSS-SCCEEEEEEEETT------------------------TTEEEEEEEEEECSCCCCEEECTTCE-EEE
T ss_pred CcEEEEEeccCC-CCCCEEEEEEcCC------------------------CCeEEEeeeeeccCCcceEEEccCCe-EEE
Confidence 478899998865 3557888887522 34566666677788899999999987 666
Q ss_pred EEec--CCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCCeeeEEecCCCCceEEEEe-CCCcEEEEeCCCCCCCCcccc
Q 014472 143 TKTV--SAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGS-DDAQICLWDINAAPKNKSLEA 219 (424)
Q Consensus 143 tg~~--dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~-~dg~i~vwd~~~~~~~~~~~~ 219 (424)
++.. ++.|++|++.. +.......+..+...+..++|+|++. +|++++ .++.|.+|++..... ...
T Consensus 56 ~~~~~~~~~v~~~~~~~--------g~~~~~~~~~~~~~~p~~~a~spdg~-~l~~~~~~~~~v~v~~~~~~g~---~~~ 123 (347)
T 3hfq_A 56 VDKEDDEGGIAAWQIDG--------QTAHKLNTVVAPGTPPAYVAVDEARQ-LVYSANYHKGTAEVMKIAADGA---LTL 123 (347)
T ss_dssp EEEETTEEEEEEEEEET--------TEEEEEEEEEEESCCCSEEEEETTTT-EEEEEETTTTEEEEEEECTTSC---EEE
T ss_pred EEecCCCceEEEEEecC--------CcEEEeeeeecCCCCCEEEEECCCCC-EEEEEeCCCCEEEEEEeCCCCC---eee
Confidence 6543 68999999965 22333444556778899999999998 566666 789999999964322 122
Q ss_pred eeeeec---------CCcceeeEEeeCCCCcEEEEEeCCCeEEEEECCCCCCCCCeeEecc-cCCCeeEEEecCCCCeEE
Q 014472 220 MQIFKV---------HEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVA-HQSEVNCLAFNPFNEWIL 289 (424)
Q Consensus 220 ~~~~~~---------~~~~v~~i~~~~~~~~~~~s~~~dg~i~i~d~~~~~~~~~~~~~~~-~~~~v~~i~~~~~~~~~l 289 (424)
+..+.. +...+.+++|+|+++ ++++...++.|.+||+........+..+.. ....+..++|+|+|++++
T Consensus 124 ~~~~~~~~~~p~~~~~~~~~~~~~~spdg~-l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~p~~~~~spdg~~l~ 202 (347)
T 3hfq_A 124 TDTVQHSGHGPRPEQDGSHIHYTDLTPDNR-LAVIDLGSDKVYVYNVSDAGQLSEQSVLTMEAGFGPRHLVFSPDGQYAF 202 (347)
T ss_dssp EEEEECCCCCSSTTCSSCCEEEEEECTTSC-EEEEETTTTEEEEEEECTTSCEEEEEEEECCTTCCEEEEEECTTSSEEE
T ss_pred cceeecCCCCCCccccCCCceEEEECCCCc-EEEEeCCCCEEEEEEECCCCcEEEeeeEEcCCCCCCceEEECCCCCEEE
Confidence 222211 123488899999998 887888899999999983222112222222 234678899999999777
Q ss_pred EEEeCCCcEEEEECCCC-CC--cceeecCCC------CCEEEEEEcCCCCcEEEEEeCCCeEEEeeCCCCCcccCCCccC
Q 014472 290 ATGSTDKTVKLFDLRKI-ST--ALHTFDSHK------EEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPEDAE 360 (424)
Q Consensus 290 ~~g~~dg~i~iwd~~~~-~~--~~~~~~~~~------~~v~~~~~sp~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~ 360 (424)
+++..++.|.+|++... +. .+..+.... ..+..++|+|+++.+++++..++.|.+|++....
T Consensus 203 v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~l~v~~~~~~~v~v~~~~~~g--------- 273 (347)
T 3hfq_A 203 LAGELSSQIASLKYDTQTGAFTQLGIVKTIPADYTAHNGAAAIRLSHDGHFLYVSNRGYNTLAVFAVTADG--------- 273 (347)
T ss_dssp EEETTTTEEEEEEEETTTTEEEEEEEEESSCTTCCSCCEEEEEEECTTSCEEEEEEETTTEEEEEEECGGG---------
T ss_pred EEeCCCCEEEEEEecCCCCceEEeeeeeecCCCCCCCCcceeEEECCCCCEEEEEeCCCCEEEEEEECCCC---------
Confidence 77778899999998741 22 122222222 4588999999998666777789999999997421
Q ss_pred CCCCeeeEEEcCCCCCcceEEeCCCCCcEEEEEeCCCcEEEEec--CCCCC
Q 014472 361 DGPPELLFIHGGHTSKISDFSWNPCEDWVISSVAEDNILQIWQM--AENIY 409 (424)
Q Consensus 361 ~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iw~~--~~~~~ 409 (424)
....+.....+...+..++|+|++++++++...++.|.+|++ .++.+
T Consensus 274 --~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~d~~tg~l 322 (347)
T 3hfq_A 274 --HLTLIQQISTEGDFPRDFDLDPTEAFVVVVNQNTDNATLYARDLTSGKL 322 (347)
T ss_dssp --CEEEEEEEECSSSCCCEEEECTTSSEEEEEETTTTEEEEEEECTTTCCE
T ss_pred --cEEEeEEEecCCCCcCeEEECCCCCEEEEEEcCCCcEEEEEEeCCCCeE
Confidence 114455555666678999999999965555556699999955 45544
No 128
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.93 E-value=6.3e-24 Score=193.96 Aligned_cols=268 Identities=9% Similarity=0.134 Sum_probs=181.0
Q ss_pred cEEEEEEeccCCceeEEEecCCCCcEEEEEecC-CeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCCeeeEEecCCCCce
Q 014472 115 KVQIIQQINHDGEVNRARYMPQNPFLIATKTVS-AEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGH 193 (424)
Q Consensus 115 ~~~~~~~~~h~~~v~~i~~~p~~~~~latg~~d-g~v~iwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~ 193 (424)
.++....+.|...+.+++|+|+++. |++++.+ +.|.+|++.... +.......+..+. .+.+++|+|++..+
T Consensus 27 ~~~~~~~~~~~~~~~~~~~spdg~~-l~~~~~~~~~v~~~~~~~~~------~~~~~~~~~~~~~-~~~~~~~s~dg~~l 98 (343)
T 1ri6_A 27 ALTLTQVVDVPGQVQPMVVSPDKRY-LYVGVRPEFRVLAYRIAPDD------GALTFAAESALPG-SLTHISTDHQGQFV 98 (343)
T ss_dssp CEEEEEEEECSSCCCCEEECTTSSE-EEEEETTTTEEEEEEECTTT------CCEEEEEEEECSS-CCSEEEECTTSSEE
T ss_pred cEEEeeeEecCCCCceEEECCCCCE-EEEeecCCCeEEEEEecCCC------CceeeccccccCC-CCcEEEEcCCCCEE
Confidence 4555667788999999999999984 5555554 999999997310 1222333444443 78999999999843
Q ss_pred EEEEeCCCcEEEEeCCCCCCCCcccceeeeecCCcceeeEEeeCCCCcEEEEEeCCCeEEEEECCCCCCCCCee--Eecc
Q 014472 194 LLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQ--SVVA 271 (424)
Q Consensus 194 l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~~s~~~dg~i~i~d~~~~~~~~~~~--~~~~ 271 (424)
++++..++.|.+||+..+ ........+. ....+.+++|+|+++.+++++..++.|.+||+........+. ....
T Consensus 99 ~~~~~~~~~i~~~d~~~~---~~~~~~~~~~-~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~ 174 (343)
T 1ri6_A 99 FVGSYNAGNVSVTRLEDG---LPVGVVDVVE-GLDGCHSANISPDNRTLWVPALKQDRICLFTVSDDGHLVAQDPAEVTT 174 (343)
T ss_dssp EEEETTTTEEEEEEEETT---EEEEEEEEEC-CCTTBCCCEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEEEEC
T ss_pred EEEecCCCeEEEEECCCC---cccccccccc-CCCCceEEEECCCCCEEEEecCCCCEEEEEEecCCCceeeeccccccc
Confidence 344445889999999522 1112233333 334688999999998777655589999999998722211111 2222
Q ss_pred -cCCCeeEEEecCCCCeEEEEEeCCCcEEEEECCCC-CCc--ceeec---CC---CCCEEEEEEcCCCCcEEEEEeCCCe
Q 014472 272 -HQSEVNCLAFNPFNEWILATGSTDKTVKLFDLRKI-STA--LHTFD---SH---KEEVFQVGWNPKNETILASCCLGRR 341 (424)
Q Consensus 272 -~~~~v~~i~~~~~~~~~l~~g~~dg~i~iwd~~~~-~~~--~~~~~---~~---~~~v~~~~~sp~~~~~l~s~~~dg~ 341 (424)
....+..++|+|+++++++++..++.|.+||+... +.. ...+. .. ...+..++|+|+++.+++++..++.
T Consensus 175 ~~~~~~~~~~~~pdg~~l~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~l~v~~~~~~~ 254 (343)
T 1ri6_A 175 VEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLYACDRTASL 254 (343)
T ss_dssp STTCCEEEEEECTTSSEEEEEETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTTSSEEEEEETTTTE
T ss_pred CCCCCcceEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEeeccccCccccccCCccceEECCCCCEEEEEecCCCE
Confidence 34578899999999976677768999999999642 221 12221 11 2357789999999866667778999
Q ss_pred EEEeeCCCCCcccCCCccCCCCCeeeEEEcCCCCCcceEEeCCCCCcEEEEEeCCCcEEEEecC
Q 014472 342 LMVWDLSRIDEEQTPEDAEDGPPELLFIHGGHTSKISDFSWNPCEDWVISSVAEDNILQIWQMA 405 (424)
Q Consensus 342 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iw~~~ 405 (424)
|.+|++..... ....+.....+.. +..++|+|+++++++++..++.|.+|++.
T Consensus 255 i~v~d~~~~~~----------~~~~~~~~~~~~~-~~~~~~s~dg~~l~~~~~~~~~v~v~~~d 307 (343)
T 1ri6_A 255 ITVFSVSEDGS----------VLSKEGFQPTETQ-PRGFNVDHSGKYLIAAGQKSHHISVYEIV 307 (343)
T ss_dssp EEEEEECTTSC----------CEEEEEEEECSSS-CCCEEECTTSSEEEEECTTTCEEEEEEEE
T ss_pred EEEEEEcCCCC----------ceEEeeeecCCCc-cceEEECCCCCEEEEecCCCCeEEEEEEc
Confidence 99999973211 1133444444444 89999999999655554478999999554
No 129
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.93 E-value=1.2e-23 Score=197.51 Aligned_cols=245 Identities=11% Similarity=0.040 Sum_probs=182.5
Q ss_pred EEeccCCceeEEEecCC--------------CCcEEEEEecC------CeEEEEeCCCCCCCCCCCCCCCCcEEEecCCC
Q 014472 120 QQINHDGEVNRARYMPQ--------------NPFLIATKTVS------AEVYVFDYSKHPSKPPLDGACSPDLRLRGHST 179 (424)
Q Consensus 120 ~~~~h~~~v~~i~~~p~--------------~~~~latg~~d------g~v~iwd~~~~~~~~~~~~~~~~~~~~~~h~~ 179 (424)
....|...+..+++++. +. .++.++.+ +.|++||+.. .....+.+|..
T Consensus 112 ~~~~~~~~~~~~~~~~~d~~~~~~~g~~~~~~~-~l~~~s~~~~~~~~~~i~i~d~~g-----------~~~~~l~~~~~ 179 (415)
T 2hqs_A 112 SYKVNKQWLRYAGHTASDEVFEKLTGIKGAFRT-RIAYVVQTNGGQFPYELRVSDYDG-----------YNQFVVHRSPQ 179 (415)
T ss_dssp EEEECGGGHHHHHHHHHHHHHHHHHSSCCCTTC-EEEEEEECSSSSCCEEEEEEETTS-----------CSCEEEEEESS
T ss_pred EEEcChhHHHHHHHHHHHHHHHHHcCCCCcCCC-EEEEEEecCCCCccceEEEEcCCC-----------CCCEEEeCCCC
Confidence 34568888888887751 44 34444443 7999999875 33567788999
Q ss_pred CeeeEEecCCCCceEEEEeCCC---cEEEEeCCCCCCCCcccceeeeecCCcceeeEEeeCCCCcEEEEEeCCCe--EEE
Q 014472 180 EGYGLSWSKFKEGHLLSGSDDA---QICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQY--LLI 254 (424)
Q Consensus 180 ~v~~l~~~~~~~~~l~s~~~dg---~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~~s~~~dg~--i~i 254 (424)
.+.+++|+|++. .|++++.++ .|++||+.++.. ..+..|...+.+++|+|+++.++++++.++. |++
T Consensus 180 ~v~~~~~Spdg~-~la~~s~~~~~~~i~~~d~~tg~~-------~~l~~~~~~~~~~~~spdg~~la~~~~~~g~~~i~~ 251 (415)
T 2hqs_A 180 PLMSPAWSPDGS-KLAYVTFESGRSALVIQTLANGAV-------RQVASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYV 251 (415)
T ss_dssp CEEEEEECTTSS-EEEEEECTTSSCEEEEEETTTCCE-------EEEECCSSCEEEEEECTTSSEEEEEECTTSSCEEEE
T ss_pred cceeeEEcCCCC-EEEEEEecCCCcEEEEEECCCCcE-------EEeecCCCcccCEEEcCCCCEEEEEEecCCCceEEE
Confidence 999999999998 688888775 999999987632 2345677889999999999877667776655 999
Q ss_pred EECCCCCCCCCeeEecccCCCeeEEEecCCCCeEEEEEeC-CC--cEEEEECCCCCCcceeecCCCCCEEEEEEcCCCCc
Q 014472 255 WDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATGST-DK--TVKLFDLRKISTALHTFDSHKEEVFQVGWNPKNET 331 (424)
Q Consensus 255 ~d~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~l~~g~~-dg--~i~iwd~~~~~~~~~~~~~~~~~v~~~~~sp~~~~ 331 (424)
||+++++ ...+..|...+.+++|+|+++. |++++. ++ .|.+||+.. +. ...+..+...+.+++|+|+++.
T Consensus 252 ~d~~~~~----~~~l~~~~~~~~~~~~spdg~~-l~~~s~~~g~~~i~~~d~~~-~~-~~~l~~~~~~~~~~~~spdG~~ 324 (415)
T 2hqs_A 252 MDLASGQ----IRQVTDGRSNNTEPTWFPDSQN-LAFTSDQAGRPQVYKVNING-GA-PQRITWEGSQNQDADVSSDGKF 324 (415)
T ss_dssp EETTTCC----EEECCCCSSCEEEEEECTTSSE-EEEEECTTSSCEEEEEETTS-SC-CEECCCSSSEEEEEEECTTSSE
T ss_pred EECCCCC----EEeCcCCCCcccceEECCCCCE-EEEEECCCCCcEEEEEECCC-CC-EEEEecCCCcccCeEECCCCCE
Confidence 9998755 3556678889999999999986 555554 55 677778876 33 4555667788999999999974
Q ss_pred EEEEEeCC---CeEEEeeCCCCCcccCCCccCCCCCeeeEEEcCCCCCcceEEeCCCCCcEEEEEeCCC---cEEEEecC
Q 014472 332 ILASCCLG---RRLMVWDLSRIDEEQTPEDAEDGPPELLFIHGGHTSKISDFSWNPCEDWVISSVAEDN---ILQIWQMA 405 (424)
Q Consensus 332 ~l~s~~~d---g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~---~i~iw~~~ 405 (424)
|++++.+ ..|.+||+.++. ...+..|. .+.+++|+|+|+. |++++.++ .|++|++.
T Consensus 325 -l~~~~~~~g~~~i~~~d~~~~~---------------~~~l~~~~-~~~~~~~spdg~~-l~~~s~~~~~~~l~~~d~~ 386 (415)
T 2hqs_A 325 -MVMVSSNGGQQHIAKQDLATGG---------------VQVLSSTF-LDETPSLAPNGTM-VIYSSSQGMGSVLNLVSTD 386 (415)
T ss_dssp -EEEEEECSSCEEEEEEETTTCC---------------EEECCCSS-SCEEEEECTTSSE-EEEEEEETTEEEEEEEETT
T ss_pred -EEEEECcCCceEEEEEECCCCC---------------EEEecCCC-CcCCeEEcCCCCE-EEEEEcCCCccEEEEEECC
Confidence 5555543 589999998743 12334444 7899999999994 66666555 79999998
Q ss_pred CCCC
Q 014472 406 ENIY 409 (424)
Q Consensus 406 ~~~~ 409 (424)
.+..
T Consensus 387 g~~~ 390 (415)
T 2hqs_A 387 GRFK 390 (415)
T ss_dssp SCCE
T ss_pred CCcE
Confidence 6644
No 130
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.93 E-value=5.5e-22 Score=182.87 Aligned_cols=300 Identities=13% Similarity=0.130 Sum_probs=197.4
Q ss_pred eEEEEEeecCCCCCCCeEEEEEEEcCCCCCCcccCCCCCcCCCCCCCCCCCCcEEEEEEeccCCceeEEEecCCCCcEEE
Q 014472 63 VQKMILGTHTSENEPNYLMLAQVQLPLDDSENDARHYDDDRSDFGGFGCANGKVQIIQQINHDGEVNRARYMPQNPFLIA 142 (424)
Q Consensus 63 ~~~~~~gt~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~~p~~~~~la 142 (424)
..++++|+++.+ ..+.|+++.++.. .++++..... +...+..++|+|+++ +|+
T Consensus 13 ~~~~~vg~y~~~-~~~~i~~~~~d~~------------------------~g~~~~~~~~-~~~~p~~l~~spdg~-~l~ 65 (361)
T 3scy_A 13 ELTMLVGTYTSG-NSKGIYTFRFNEE------------------------TGESLPLSDA-EVANPSYLIPSADGK-FVY 65 (361)
T ss_dssp EEEEEEEECCSS-SCCEEEEEEEETT------------------------TCCEEEEEEE-ECSCCCSEEECTTSS-EEE
T ss_pred ceEEEEEeccCC-CCCCEEEEEEeCC------------------------CCCEEEeecc-cCCCCceEEECCCCC-EEE
Confidence 578899999875 4567888888522 3455555556 888899999999997 566
Q ss_pred EEecC----CeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCCeeeEEecCCCCceEEEEe-CCCcEEEEeCCCCCCCCcc
Q 014472 143 TKTVS----AEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGS-DDAQICLWDINAAPKNKSL 217 (424)
Q Consensus 143 tg~~d----g~v~iwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~-~dg~i~vwd~~~~~~~~~~ 217 (424)
+++.+ +.|.+|++.... +..........+......+++ ++. +|++++ .++.|.+|++.........
T Consensus 66 ~~~~~~~~~~~v~~~~~~~~~------g~~~~~~~~~~~~~~p~~~~~--dg~-~l~~~~~~~~~v~~~~~~~~g~~~~~ 136 (361)
T 3scy_A 66 SVNEFSKDQAAVSAFAFDKEK------GTLHLLNTQKTMGADPCYLTT--NGK-NIVTANYSGGSITVFPIGQDGALLPA 136 (361)
T ss_dssp EEECCSSTTCEEEEEEEETTT------TEEEEEEEEECSSSCEEEEEE--CSS-EEEEEETTTTEEEEEEBCTTSCBCSC
T ss_pred EEEccCCCCCcEEEEEEeCCC------CcEEEeeEeccCCCCcEEEEE--CCC-EEEEEECCCCEEEEEEeCCCCcCccc
Confidence 66654 899999987510 112233344445566778888 566 455554 6889999999764332222
Q ss_pred cceeeee--------cCCcceeeEEeeCCCCcEEEEEeCCCeEEEEECCCCCC------CCC----eeEecccCCCeeEE
Q 014472 218 EAMQIFK--------VHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSV------SKP----VQSVVAHQSEVNCL 279 (424)
Q Consensus 218 ~~~~~~~--------~~~~~v~~i~~~~~~~~~~~s~~~dg~i~i~d~~~~~~------~~~----~~~~~~~~~~v~~i 279 (424)
....... .+...+.+++|+|+++.++++...++.|.+|++..... ... ......+...+..+
T Consensus 137 ~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 216 (361)
T 3scy_A 137 SDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLADDLGTDQIHKFNINPNANADNKEKFLTKGTPEAFKVAPGSGPRHL 216 (361)
T ss_dssp SEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTCCTTTCCCCEEEEEEEEEECCTTCCEEEE
T ss_pred ceeEEccCCCCCccccCCCcceEEEECCCCCEEEEEeCCCCEEEEEEEcCCCCcccccceeecccccceecCCCCCCeEE
Confidence 1111111 12234688999999988887777789999999876441 110 11122345568899
Q ss_pred EecCCCCeEEEEEeCCCcEEEEECCCCCCc--ceee---cCCCCCEEEEEEcCCCCcEEEEEeC-CCeEEEeeCCCCCcc
Q 014472 280 AFNPFNEWILATGSTDKTVKLFDLRKISTA--LHTF---DSHKEEVFQVGWNPKNETILASCCL-GRRLMVWDLSRIDEE 353 (424)
Q Consensus 280 ~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~--~~~~---~~~~~~v~~~~~sp~~~~~l~s~~~-dg~i~iwd~~~~~~~ 353 (424)
+|+|++++++++...++.|.+||+.. +.. +..+ ..+......++|+|+++.++++... ++.|.+|++....
T Consensus 217 ~~spdg~~l~v~~~~~~~v~v~~~~~-g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~~~~-- 293 (361)
T 3scy_A 217 IFNSDGKFAYLINEIGGTVIAFRYAD-GMLDEIQTVAADTVNAQGSGDIHLSPDGKYLYASNRLKADGVAIFKVDETN-- 293 (361)
T ss_dssp EECTTSSEEEEEETTTCEEEEEEEET-TEEEEEEEEESCSSCCCCEEEEEECTTSSEEEEEECSSSCEEEEEEECTTT--
T ss_pred EEcCCCCEEEEEcCCCCeEEEEEecC-CceEEeEEEecCCCCCCCcccEEECCCCCEEEEECCCCCCEEEEEEEcCCC--
Confidence 99999986555555789999999985 322 2222 2334567899999999754455555 6899999996311
Q ss_pred cCCCccCCCCCeeeEEEcCCCCCcceEEeCCCCCcEEEEEeCCCcEEEEecC--CCCCC
Q 014472 354 QTPEDAEDGPPELLFIHGGHTSKISDFSWNPCEDWVISSVAEDNILQIWQMA--ENIYH 410 (424)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iw~~~--~~~~~ 410 (424)
+....+..... ...+.+++|+|++++++++...++.|.+|++. ++.+.
T Consensus 294 --------g~~~~~~~~~~-g~~~~~~~~spdg~~l~~~~~~~~~v~v~~~d~~~g~~~ 343 (361)
T 3scy_A 294 --------GTLTKVGYQLT-GIHPRNFIITPNGKYLLVACRDTNVIQIFERDQATGLLT 343 (361)
T ss_dssp --------CCEEEEEEEEC-SSCCCEEEECTTSCEEEEEETTTTEEEEEEECTTTCCEE
T ss_pred --------CcEEEeeEecC-CCCCceEEECCCCCEEEEEECCCCCEEEEEEECCCCcEe
Confidence 11133333433 45688999999999655555578999996554 55443
No 131
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.92 E-value=1e-22 Score=185.25 Aligned_cols=253 Identities=6% Similarity=0.027 Sum_probs=181.9
Q ss_pred cCCceeEEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCC-cEEEecCCCCeeeEEecCCCCceEEEEeCCC-
Q 014472 124 HDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSP-DLRLRGHSTEGYGLSWSKFKEGHLLSGSDDA- 201 (424)
Q Consensus 124 h~~~v~~i~~~p~~~~~latg~~dg~v~iwd~~~~~~~~~~~~~~~~-~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg- 201 (424)
+...+ .++|+|+++.+++++..++.|.+||... ... ...+..+.....+++|+|++. +|+++..++
T Consensus 39 ~~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~----------~~~~~~~~~~~~~~~~~~~~s~dg~-~l~~~~~~~~ 106 (331)
T 3u4y_A 39 GYDFV-DTAITSDCSNVVVTSDFCQTLVQIETQL----------EPPKVVAIQEGQSSMADVDITPDDQ-FAVTVTGLNH 106 (331)
T ss_dssp CCCEE-EEEECSSSCEEEEEESTTCEEEEEECSS----------SSCEEEEEEECSSCCCCEEECTTSS-EEEECCCSSS
T ss_pred cCCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCC----------CceeEEecccCCCCccceEECCCCC-EEEEecCCCC
Confidence 34556 9999999986677766689999999987 233 455666666665699999988 566555553
Q ss_pred --cEEEEeCCCCCCCCcccceeeeecCCcceeeEEeeCCCCcEEEEEeCCCe-EEEEECCCCCCCCCe-eEecccCCCee
Q 014472 202 --QICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQY-LLIWDLRTPSVSKPV-QSVVAHQSEVN 277 (424)
Q Consensus 202 --~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~~s~~~dg~-i~i~d~~~~~~~~~~-~~~~~~~~~v~ 277 (424)
.|.+||+.++. .+..+. ....+.+++|+|+++.++++...++. |.+|++......... .........+.
T Consensus 107 ~~~i~v~d~~~~~------~~~~~~-~~~~~~~~~~spdg~~l~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~ 179 (331)
T 3u4y_A 107 PFNMQSYSFLKNK------FISTIP-IPYDAVGIAISPNGNGLILIDRSSANTVRRFKIDADGVLFDTGQEFISGGTRPF 179 (331)
T ss_dssp SCEEEEEETTTTE------EEEEEE-CCTTEEEEEECTTSSCEEEEEETTTTEEEEEEECTTCCEEEEEEEEECSSSSEE
T ss_pred cccEEEEECCCCC------eEEEEE-CCCCccceEECCCCCEEEEEecCCCceEEEEEECCCCcEeecCCccccCCCCcc
Confidence 89999997663 233333 34456899999999888888788788 999999864421111 11123345689
Q ss_pred EEEecCCCCeEEEEEeCCCcEEEEECCCCCCc---ceeecCCCCCEEEEEEcCCCCcEEEEEeCCCeEEEeeCCCCCccc
Q 014472 278 CLAFNPFNEWILATGSTDKTVKLFDLRKISTA---LHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQ 354 (424)
Q Consensus 278 ~i~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~---~~~~~~~~~~v~~~~~sp~~~~~l~s~~~dg~i~iwd~~~~~~~~ 354 (424)
.++|+|+++++++++..++.|.+||+.+ +.. +..+.. ...+..++|+|+++.++++...++.|.+||+.++..
T Consensus 180 ~~~~spdg~~l~v~~~~~~~v~v~d~~~-~~~~~~~~~~~~-~~~~~~~~~spdg~~l~v~~~~~~~i~~~d~~~~~~-- 255 (331)
T 3u4y_A 180 NITFTPDGNFAFVANLIGNSIGILETQN-PENITLLNAVGT-NNLPGTIVVSRDGSTVYVLTESTVDVFNFNQLSGTL-- 255 (331)
T ss_dssp EEEECTTSSEEEEEETTTTEEEEEECSS-TTSCEEEEEEEC-SSCCCCEEECTTSSEEEEECSSEEEEEEEETTTTEE--
T ss_pred ceEECCCCCEEEEEeCCCCeEEEEECCC-CcccceeeeccC-CCCCceEEECCCCCEEEEEEcCCCEEEEEECCCCce--
Confidence 9999999997777777899999999987 555 566654 467789999999986666666688899999987532
Q ss_pred CCCccCCCCCeeeEEEcCC----CC---CcceEEeCCCCCcEEEEEeCCCcEEEEecCCCCC
Q 014472 355 TPEDAEDGPPELLFIHGGH----TS---KISDFSWNPCEDWVISSVAEDNILQIWQMAENIY 409 (424)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~h----~~---~v~~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~ 409 (424)
..+..+..+ .. ....++|+|+++++++++..++.|.+|++.....
T Consensus 256 ----------~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~ 307 (331)
T 3u4y_A 256 ----------SFVKSFGHGLLIDPRPLFGANQMALNKTETKLFISANISRELKVFTISGKVV 307 (331)
T ss_dssp ----------EEEEEEECCCCCCCGGGTTCCCEEECTTSSEEEEEETTTTEEEEEETTSCEE
T ss_pred ----------eeecccccccccCCCCcccccceEECCCCCEEEEecCCCCcEEEEEecCCcc
Confidence 112221111 11 2255899999997667777788999999987654
No 132
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.92 E-value=6.9e-23 Score=182.70 Aligned_cols=243 Identities=11% Similarity=0.097 Sum_probs=175.1
Q ss_pred EEeccCCceeEEEecCCCCcEEEEEecCCeEEEEeCCC-CCCCCCCCCCCCCcEEEecC-CCCeeeEEecCCCCceEEEE
Q 014472 120 QQINHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSK-HPSKPPLDGACSPDLRLRGH-STEGYGLSWSKFKEGHLLSG 197 (424)
Q Consensus 120 ~~~~h~~~v~~i~~~p~~~~~latg~~dg~v~iwd~~~-~~~~~~~~~~~~~~~~~~~h-~~~v~~l~~~~~~~~~l~s~ 197 (424)
....|.+.|.+++|+|++. +|++++ ++.|++||+.. . ........| ...+.+++|+|++. +|+++
T Consensus 36 ~~~~~~~~v~~~~~spdg~-~l~~~~-~~~i~~~d~~~~~----------~~~~~~~~~~~~~~~~~~~spdg~-~l~~~ 102 (297)
T 2ojh_A 36 VVWQTPELFEAPNWSPDGK-YLLLNS-EGLLYRLSLAGDP----------SPEKVDTGFATICNNDHGISPDGA-LYAIS 102 (297)
T ss_dssp EEEEESSCCEEEEECTTSS-EEEEEE-TTEEEEEESSSCC----------SCEECCCTTCCCBCSCCEECTTSS-EEEEE
T ss_pred eeccCCcceEeeEECCCCC-EEEEEc-CCeEEEEeCCCCC----------CceEeccccccccccceEECCCCC-EEEEE
Confidence 4456899999999999997 677765 78999999875 2 122223344 36789999999988 68877
Q ss_pred e--CCCcEEEEeCCCCCCCCcccceeeeecCCcceeeEEeeCCCCcEEEEEeCCCeEEEEECCCCCCCCCeeEecccCCC
Q 014472 198 S--DDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSE 275 (424)
Q Consensus 198 ~--~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~ 275 (424)
+ .++...||.++.... ....+. +...+..++|+|+++.++++++.++.+.||+++.... ....+..+...
T Consensus 103 ~~~~~~~~~l~~~~~~~~-----~~~~~~-~~~~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~--~~~~~~~~~~~ 174 (297)
T 2ojh_A 103 DKVEFGKSAIYLLPSTGG-----TPRLMT-KNLPSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSG--VETRLTHGEGR 174 (297)
T ss_dssp ECTTTSSCEEEEEETTCC-----CCEECC-SSSSEEEEEECTTSSEEEEEEEETTEEEEEEEETTTC--CEEECCCSSSC
T ss_pred EeCCCCcceEEEEECCCC-----ceEEee-cCCCccceEECCCCCEEEEEECCCCceEEEEEECCCC--cceEcccCCCc
Confidence 7 335556655532211 112222 2334889999999988777888999999999754321 24556667889
Q ss_pred eeEEEecCCCCeEEEEEeCCCcEEEEECCCCCCcceeecCCCCCEEEEEEcCCCCcEEEEEeCC-----------CeEEE
Q 014472 276 VNCLAFNPFNEWILATGSTDKTVKLFDLRKISTALHTFDSHKEEVFQVGWNPKNETILASCCLG-----------RRLMV 344 (424)
Q Consensus 276 v~~i~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~s~~~d-----------g~i~i 344 (424)
+.+++|+|+++.+++++..++.+++|+++.....+..+..|...+.+++|+|+++. |++++.+ +.|.+
T Consensus 175 ~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~-l~~~~~~~~~~~~~~~~~~~l~~ 253 (297)
T 2ojh_A 175 NDGPDYSPDGRWIYFNSSRTGQMQIWRVRVDGSSVERITDSAYGDWFPHPSPSGDK-VVFVSYDADVFDHPRDLDVRVQL 253 (297)
T ss_dssp EEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCEEECCCCSEEEEEEEECTTSSE-EEEEEEETTCCSCCSSEEEEEEE
T ss_pred cccceECCCCCEEEEEecCCCCccEEEECCCCCCcEEEecCCcccCCeEECCCCCE-EEEEEcCCCCCcccccCceEEEE
Confidence 99999999998655555569999999987445667788888889999999999974 5555544 56999
Q ss_pred eeCCCCCcccCCCccCCCCCeeeEEEcCCCCCcceEEeCCCCCcEEEEEeCC
Q 014472 345 WDLSRIDEEQTPEDAEDGPPELLFIHGGHTSKISDFSWNPCEDWVISSVAED 396 (424)
Q Consensus 345 wd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d 396 (424)
||+..+.. ..+....+|...+..++|+|+++++++++..+
T Consensus 254 ~d~~~~~~------------~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~ 293 (297)
T 2ojh_A 254 MDMDGGNV------------ETLFDLFGGQGTMNSPNWSPDGDEFAYVRYFP 293 (297)
T ss_dssp EETTSCSC------------EEEEEEEESTTTSCSCCBCTTSSEEEEEEECC
T ss_pred EecCCCCc------------eeeeccCCCCcccccceECCCCCEEEEEEecc
Confidence 99986432 34555557788899999999999544444433
No 133
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.92 E-value=8.7e-24 Score=199.18 Aligned_cols=216 Identities=13% Similarity=0.119 Sum_probs=156.3
Q ss_pred CceeEEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCC------CCCCcEEEecCCCCeeeEEecCCCCceEE----
Q 014472 126 GEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDG------ACSPDLRLRGHSTEGYGLSWSKFKEGHLL---- 195 (424)
Q Consensus 126 ~~v~~i~~~p~~~~~latg~~dg~v~iwd~~~~~~~~~~~~------~~~~~~~~~~h~~~v~~l~~~~~~~~~l~---- 195 (424)
..++.+++++++. ++++++.++ ++||+............ ...+.. ...+...|.+++|+|++. +|+
T Consensus 37 ~~~n~lavs~~~~-~l~~~~~dg-v~v~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~v~~l~~spdg~-~lav~~~ 112 (434)
T 2oit_A 37 ERSSLLAVSNKYG-LVFAGGASG-LQIFPTKNLLIQNKPGDDPNKIVDKVQGL-LVPMKFPIHHLALSCDNL-TLSACMM 112 (434)
T ss_dssp SCCBCEEEETTTT-EEEEEETTE-EEEEEHHHHCCCCCTTCCTTCEEECCCCE-EECCSSCEEEEEECTTSC-EEEEEEE
T ss_pred CCccEEEEecCCC-EEEEECCCE-EEEEEchHhhhhcccccCcccccccCccc-cccCCCcccEEEEcCCCC-EEEEEEe
Confidence 4588999999886 788888887 89988643211000000 011111 224677899999999988 677
Q ss_pred EEeCCCcEEEEeCCCC-----CCCCcccceeeeecCCcceeeEEeeCCCCcEEEEEeCCCeEEEEECCCCCCCCCeeEec
Q 014472 196 SGSDDAQICLWDINAA-----PKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVV 270 (424)
Q Consensus 196 s~~~dg~i~vwd~~~~-----~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~~s~~~dg~i~i~d~~~~~~~~~~~~~~ 270 (424)
+|+.|+.|++||+.+. .....+..+..+.+|...|.+++|+|++..+|++++.||+|++||++++.. +....
T Consensus 113 sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~Dg~v~iwD~~~~~~---~~~~~ 189 (434)
T 2oit_A 113 SSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADGSIAVLQVTETVK---VCATL 189 (434)
T ss_dssp ETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETTSCEEEEEESSSEE---EEEEE
T ss_pred ccCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEECCCeEEEEEcCCCcc---eeecc
Confidence 7889999999998654 111222234556779999999999998667889999999999999998642 44455
Q ss_pred ccCCCeeEEEecCCCCeEEEEEeCCCcEEEEECCCCCCcceeecCC-------CCCEEEEEEcCCCCcEEEEEeCCCe--
Q 014472 271 AHQSEVNCLAFNPFNEWILATGSTDKTVKLFDLRKISTALHTFDSH-------KEEVFQVGWNPKNETILASCCLGRR-- 341 (424)
Q Consensus 271 ~~~~~v~~i~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~-------~~~v~~~~~sp~~~~~l~s~~~dg~-- 341 (424)
.|...|++++|+|++. +|++|+.||.|++||++. .....+..| ...|.+++|++++..+++.++.+|.
T Consensus 190 ~~~~~v~~v~wspdg~-~lasgs~dg~v~iwd~~~--~~~~~~~~~~~~~~~~~~~v~~v~w~~~~~~l~~~~~~dg~~~ 266 (434)
T 2oit_A 190 PSTVAVTSVCWSPKGK-QLAVGKQNGTVVQYLPTL--QEKKVIPCPPFYESDHPVRVLDVLWIGTYVFAIVYAAADGTLE 266 (434)
T ss_dssp CGGGCEEEEEECTTSS-CEEEEETTSCEEEECTTC--CEEEEECCCTTCCTTSCEEEEEEEEEETTEEEEEEEETTCCSS
T ss_pred CCCCceeEEEEcCCCC-EEEEEcCCCcEEEEccCC--cccccccCCcccCCCCceeEEEEEEecCceEEEEEccCCCccC
Confidence 6888999999999988 599999999999999982 334444332 3489999999988543444555543
Q ss_pred ----EEEeeCCCCC
Q 014472 342 ----LMVWDLSRID 351 (424)
Q Consensus 342 ----i~iwd~~~~~ 351 (424)
+++|+++...
T Consensus 267 ~~~~v~i~~l~~~~ 280 (434)
T 2oit_A 267 TSPDVVMALLPKKE 280 (434)
T ss_dssp SCCEEEEEECCCTT
T ss_pred CCCceEEEEeccCC
Confidence 8999998653
No 134
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.92 E-value=4.4e-22 Score=186.86 Aligned_cols=225 Identities=8% Similarity=0.054 Sum_probs=169.3
Q ss_pred EeccCCceeEEEecCCCCcEEEEEecCC---eEEEEeCCCCCCCCCCCCCCCCcEEEecCCCCeeeEEecCCCCceEEEE
Q 014472 121 QINHDGEVNRARYMPQNPFLIATKTVSA---EVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSG 197 (424)
Q Consensus 121 ~~~h~~~v~~i~~~p~~~~~latg~~dg---~v~iwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~ 197 (424)
...|.+.|.+++|+|+++ .||+++.++ .|++||+.+ .. ...+..|...+.+++|+|++..+++++
T Consensus 174 l~~~~~~v~~~~~Spdg~-~la~~s~~~~~~~i~~~d~~t----------g~-~~~l~~~~~~~~~~~~spdg~~la~~~ 241 (415)
T 2hqs_A 174 VHRSPQPLMSPAWSPDGS-KLAYVTFESGRSALVIQTLAN----------GA-VRQVASFPRHNGAPAFSPDGSKLAFAL 241 (415)
T ss_dssp EEEESSCEEEEEECTTSS-EEEEEECTTSSCEEEEEETTT----------CC-EEEEECCSSCEEEEEECTTSSEEEEEE
T ss_pred EeCCCCcceeeEEcCCCC-EEEEEEecCCCcEEEEEECCC----------Cc-EEEeecCCCcccCEEEcCCCCEEEEEE
Confidence 346889999999999997 677777775 999999987 22 345777888999999999998544477
Q ss_pred eCCCc--EEEEeCCCCCCCCcccceeeeecCCcceeeEEeeCCCCcEEEEEeCCC--eEEEEECCCCCCCCCeeEecccC
Q 014472 198 SDDAQ--ICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQ--YLLIWDLRTPSVSKPVQSVVAHQ 273 (424)
Q Consensus 198 ~~dg~--i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~~s~~~dg--~i~i~d~~~~~~~~~~~~~~~~~ 273 (424)
+.++. |.+||+.++. ...+..|...+.+++|+|+++.+++++..++ .|.+||+.++. ...+..+.
T Consensus 242 ~~~g~~~i~~~d~~~~~-------~~~l~~~~~~~~~~~~spdg~~l~~~s~~~g~~~i~~~d~~~~~----~~~l~~~~ 310 (415)
T 2hqs_A 242 SKTGSLNLYVMDLASGQ-------IRQVTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGA----PQRITWEG 310 (415)
T ss_dssp CTTSSCEEEEEETTTCC-------EEECCCCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSC----CEECCCSS
T ss_pred ecCCCceEEEEECCCCC-------EEeCcCCCCcccceEECCCCCEEEEEECCCCCcEEEEEECCCCC----EEEEecCC
Confidence 76665 9999997652 2345567888999999999986654444455 67778988755 23444567
Q ss_pred CCeeEEEecCCCCeEEEEEeCC--CcEEEEECCCCCCcceeecCCCCCEEEEEEcCCCCcEEEEEeCCC---eEEEeeCC
Q 014472 274 SEVNCLAFNPFNEWILATGSTD--KTVKLFDLRKISTALHTFDSHKEEVFQVGWNPKNETILASCCLGR---RLMVWDLS 348 (424)
Q Consensus 274 ~~v~~i~~~~~~~~~l~~g~~d--g~i~iwd~~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~s~~~dg---~i~iwd~~ 348 (424)
..+.+++|+|+|+++++++..+ ..|++||+.+ +.. ..+..+. .+.+++|+|+++ +|++++.++ .|.+||+.
T Consensus 311 ~~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~-~~~-~~l~~~~-~~~~~~~spdg~-~l~~~s~~~~~~~l~~~d~~ 386 (415)
T 2hqs_A 311 SQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLAT-GGV-QVLSSTF-LDETPSLAPNGT-MVIYSSSQGMGSVLNLVSTD 386 (415)
T ss_dssp SEEEEEEECTTSSEEEEEEECSSCEEEEEEETTT-CCE-EECCCSS-SCEEEEECTTSS-EEEEEEEETTEEEEEEEETT
T ss_pred CcccCeEECCCCCEEEEEECcCCceEEEEEECCC-CCE-EEecCCC-CcCCeEEcCCCC-EEEEEEcCCCccEEEEEECC
Confidence 7899999999999644444432 5899999987 443 4555554 899999999997 566666555 79999987
Q ss_pred CCCcccCCCccCCCCCeeeEEEcCCCCCcceEEeCCCCC
Q 014472 349 RIDEEQTPEDAEDGPPELLFIHGGHTSKISDFSWNPCED 387 (424)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~ 387 (424)
. .....+.+|.+.|.+++|+|...
T Consensus 387 g---------------~~~~~l~~~~~~v~~~~~~~~~~ 410 (415)
T 2hqs_A 387 G---------------RFKARLPATDGQVKFPAWSPYLH 410 (415)
T ss_dssp S---------------CCEEECCCSSSEEEEEEECCCCC
T ss_pred C---------------CcEEEeeCCCCCCcCCccccccc
Confidence 4 34566778889999999999754
No 135
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.91 E-value=3.9e-22 Score=193.01 Aligned_cols=259 Identities=11% Similarity=0.080 Sum_probs=192.9
Q ss_pred EEeccCCceeEEEecCCCCcEEEEEecCCeEEEEeC--CCCCCCCCCCCCCCCcEEEecCCCCeeeEEecC----CCCce
Q 014472 120 QQINHDGEVNRARYMPQNPFLIATKTVSAEVYVFDY--SKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSK----FKEGH 193 (424)
Q Consensus 120 ~~~~h~~~v~~i~~~p~~~~~latg~~dg~v~iwd~--~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~----~~~~~ 193 (424)
..+.....+..++|+|+++ +|++++.++.|++||+ .+ ......+. +...+..++|+| ++. +
T Consensus 173 ~~i~~g~~~~~v~~spdg~-~l~v~~~d~~V~v~D~~~~t----------~~~~~~i~-~g~~p~~va~sp~~~~dg~-~ 239 (543)
T 1nir_A 173 KVIDTGYAVHISRMSASGR-YLLVIGRDARIDMIDLWAKE----------PTKVAEIK-IGIEARSVESSKFKGYEDR-Y 239 (543)
T ss_dssp EEEECSTTEEEEEECTTSC-EEEEEETTSEEEEEETTSSS----------CEEEEEEE-CCSEEEEEEECCSTTCTTT-E
T ss_pred EEEecCcccceEEECCCCC-EEEEECCCCeEEEEECcCCC----------CcEEEEEe-cCCCcceEEeCCCcCCCCC-E
Confidence 3444222388999999997 6778888999999999 44 34455555 456789999999 998 5
Q ss_pred EEEEe-CCCcEEEEeCCCCCCCCcccceeeeec----------CC-cceeeEEeeCCCCcEEEEEeCCCeEEEEECCCCC
Q 014472 194 LLSGS-DDAQICLWDINAAPKNKSLEAMQIFKV----------HE-GVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPS 261 (424)
Q Consensus 194 l~s~~-~dg~i~vwd~~~~~~~~~~~~~~~~~~----------~~-~~v~~i~~~~~~~~~~~s~~~dg~i~i~d~~~~~ 261 (424)
|++++ .+++|.+||..+.+. +..+.. |. ..+..+.++|+++.++++...++.|.+||+.+.+
T Consensus 240 l~v~~~~~~~v~v~D~~t~~~------~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~~g~i~vvd~~~~~ 313 (543)
T 1nir_A 240 TIAGAYWPPQFAIMDGETLEP------KQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKDID 313 (543)
T ss_dssp EEEEEEESSEEEEEETTTCCE------EEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEECTTSS
T ss_pred EEEEEccCCeEEEEecccccc------ceeecccCcccCccccccCCceEEEEECCCCCEEEEEECCCCeEEEEEecCCC
Confidence 77666 589999999876633 222222 22 3788999999999899999999999999998865
Q ss_pred CCCCeeEecccCCCeeEEEecCCCCeEEEEEeCCCcEEEEECCCCCCcceeecC----CCCCEEEEEEcCCCCcEEEEEe
Q 014472 262 VSKPVQSVVAHQSEVNCLAFNPFNEWILATGSTDKTVKLFDLRKISTALHTFDS----HKEEVFQVGWNPKNETILASCC 337 (424)
Q Consensus 262 ~~~~~~~~~~~~~~v~~i~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~----~~~~v~~~~~sp~~~~~l~s~~ 337 (424)
... +..+ .+...+..++|+|+++++++++..+++|.+||+.+ ++.+..+.. |.+....+ ++|++..+++++.
T Consensus 314 ~l~-~~~i-~~~~~~~~~~~spdg~~l~va~~~~~~v~v~D~~t-g~l~~~i~~g~~ph~g~g~~~-~~p~~g~~~~s~~ 389 (543)
T 1nir_A 314 NLT-VTSI-GAAPFLHDGGWDSSHRYFMTAANNSNKVAVIDSKD-RRLSALVDVGKTPHPGRGANF-VHPKYGPVWSTSH 389 (543)
T ss_dssp SCE-EEEE-ECCSSCCCEEECTTSCEEEEEEGGGTEEEEEETTT-TEEEEEEECSSSBCCTTCEEE-EETTTEEEEEEEB
T ss_pred cce-eEEe-ccCcCccCceECCCCCEEEEEecCCCeEEEEECCC-CeEEEeeccCCCCCCCCCccc-CCCCCccEEEecc
Confidence 421 2233 35677889999999998777777799999999998 677776663 55444443 5787556788876
Q ss_pred -CCCeEEEeeCCCCCcccCCCccCCCCCeeeEEEcCCCCCcceEEeCCCCCcEEEEEe-------CCCcEEEEecCCCCC
Q 014472 338 -LGRRLMVWDLSRIDEEQTPEDAEDGPPELLFIHGGHTSKISDFSWNPCEDWVISSVA-------EDNILQIWQMAENIY 409 (424)
Q Consensus 338 -~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~-------~d~~i~iw~~~~~~~ 409 (424)
.|++|.+||+...... ....+++..+.+|...+..++++|++++ |++++ .++.|.|||+.+...
T Consensus 390 ~~d~~V~v~d~~~~~~~-------~~~~~~v~~l~~~g~~~~~v~~~pdg~~-l~v~~~~~~~~~~~~~v~v~d~~~~~~ 461 (543)
T 1nir_A 390 LGDGSISLIGTDPKNHP-------QYAWKKVAELQGQGGGSLFIKTHPKSSH-LYVDTTFNPDARISQSVAVFDLKNLDA 461 (543)
T ss_dssp SSSSEEEEEECCTTTCT-------TTBTSEEEEEECSCSCCCCEECCTTCCE-EEECCTTCSSHHHHTCEEEEETTCTTS
T ss_pred CCCceEEEEEeCCCCCc-------hhcCeEEEEEEcCCCCceEEEcCCCCCc-EEEecCCCCCcccCceEEEEECCCCCC
Confidence 5899999999873211 0113677888888888999999999994 66655 277999999998754
No 136
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.91 E-value=1.3e-21 Score=189.27 Aligned_cols=264 Identities=13% Similarity=0.155 Sum_probs=195.8
Q ss_pred EEEEEEeccCCceeEEEecC----CCCcEEEEEe-cCCeEEEEeCCCCCCCCCCCCCCCCcEEEec----------CC-C
Q 014472 116 VQIIQQINHDGEVNRARYMP----QNPFLIATKT-VSAEVYVFDYSKHPSKPPLDGACSPDLRLRG----------HS-T 179 (424)
Q Consensus 116 ~~~~~~~~h~~~v~~i~~~p----~~~~~latg~-~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~----------h~-~ 179 (424)
.+++..+.+...+..++|+| +++. +++++ .+++|.|||..+ .++...+.. |. .
T Consensus 212 ~~~~~~i~~g~~p~~va~sp~~~~dg~~-l~v~~~~~~~v~v~D~~t----------~~~~~~i~~~g~~~~~~~~~~~~ 280 (543)
T 1nir_A 212 PTKVAEIKIGIEARSVESSKFKGYEDRY-TIAGAYWPPQFAIMDGET----------LEPKQIVSTRGMTVDTQTYHPEP 280 (543)
T ss_dssp CEEEEEEECCSEEEEEEECCSTTCTTTE-EEEEEEESSEEEEEETTT----------CCEEEEEECCEECSSSCCEESCC
T ss_pred CcEEEEEecCCCcceEEeCCCcCCCCCE-EEEEEccCCeEEEEeccc----------cccceeecccCcccCccccccCC
Confidence 44566777888899999999 9984 55555 589999999876 344444443 22 3
Q ss_pred CeeeEEecCCCCceEEEEeCCCcEEEEeCCCCCCCCcccceeeeecCCcceeeEEeeCCCCcEEEEEeCCCeEEEEECCC
Q 014472 180 EGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRT 259 (424)
Q Consensus 180 ~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~~s~~~dg~i~i~d~~~ 259 (424)
.+.++.++|++..++++...++.|.+||+.+..... +..+ .+...+.++.|+|+++++++++..+++|.+||+.+
T Consensus 281 ~v~~i~~s~~~~~~~vs~~~~g~i~vvd~~~~~~l~----~~~i-~~~~~~~~~~~spdg~~l~va~~~~~~v~v~D~~t 355 (543)
T 1nir_A 281 RVAAIIASHEHPEFIVNVKETGKVLLVNYKDIDNLT----VTSI-GAAPFLHDGGWDSSHRYFMTAANNSNKVAVIDSKD 355 (543)
T ss_dssp CEEEEEECSSSSEEEEEETTTTEEEEEECTTSSSCE----EEEE-ECCSSCCCEEECTTSCEEEEEEGGGTEEEEEETTT
T ss_pred ceEEEEECCCCCEEEEEECCCCeEEEEEecCCCcce----eEEe-ccCcCccCceECCCCCEEEEEecCCCeEEEEECCC
Confidence 688999999888778888899999999998753211 1122 35667889999999998887777899999999998
Q ss_pred CCCCCCeeEecc----cCCCeeEEEecCCCCeEEEEEe-CCCcEEEEECCCC------CCcceeecCCCCCEEEEEEcCC
Q 014472 260 PSVSKPVQSVVA----HQSEVNCLAFNPFNEWILATGS-TDKTVKLFDLRKI------STALHTFDSHKEEVFQVGWNPK 328 (424)
Q Consensus 260 ~~~~~~~~~~~~----~~~~v~~i~~~~~~~~~l~~g~-~dg~i~iwd~~~~------~~~~~~~~~~~~~v~~~~~sp~ 328 (424)
++. +..+.. |......+ ++|++..+++++. .|++|.+||+.+. .+.++++..|...+..++++|+
T Consensus 356 g~l---~~~i~~g~~ph~g~g~~~-~~p~~g~~~~s~~~~d~~V~v~d~~~~~~~~~~~~~v~~l~~~g~~~~~v~~~pd 431 (543)
T 1nir_A 356 RRL---SALVDVGKTPHPGRGANF-VHPKYGPVWSTSHLGDGSISLIGTDPKNHPQYAWKKVAELQGQGGGSLFIKTHPK 431 (543)
T ss_dssp TEE---EEEEECSSSBCCTTCEEE-EETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECSCSCCCCEECCTT
T ss_pred CeE---EEeeccCCCCCCCCCccc-CCCCCccEEEeccCCCceEEEEEeCCCCCchhcCeEEEEEEcCCCCceEEEcCCC
Confidence 764 444432 54444343 4777556788876 6899999999862 4678899999989999999999
Q ss_pred CCcEEEEEe-------CCCeEEEeeCCCCCcccCCCccCCCCCeeeEE-----EcCCCCCcceEEeCCCCCcEEEEEe--
Q 014472 329 NETILASCC-------LGRRLMVWDLSRIDEEQTPEDAEDGPPELLFI-----HGGHTSKISDFSWNPCEDWVISSVA-- 394 (424)
Q Consensus 329 ~~~~l~s~~-------~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~-----~~~h~~~v~~~~~~~~~~~~l~s~~-- 394 (424)
++ .|++++ .+++|.+||+.+..... +.+-. +..+...+..+.|+|+|+.++++..
T Consensus 432 g~-~l~v~~~~~~~~~~~~~v~v~d~~~~~~~~----------~~~~v~~~~~~~~~~~~~~~~~~~~~g~~~~~s~~~~ 500 (543)
T 1nir_A 432 SS-HLYVDTTFNPDARISQSVAVFDLKNLDAKY----------QVLPIAEWADLGEGAKRVVQPEYNKRGDEVWFSVWNG 500 (543)
T ss_dssp CC-EEEECCTTCSSHHHHTCEEEEETTCTTSCC----------EEECHHHHHCCCSSCCEEEEEEECSSSSEEEEEEECC
T ss_pred CC-cEEEecCCCCCcccCceEEEEECCCCCCCe----------EEeechhhcccCCCCCceEeccCCCCCCEEEEEeecC
Confidence 97 566665 26799999999865321 11100 1345667999999999997666643
Q ss_pred --CCCcEEEEecCCCCCC
Q 014472 395 --EDNILQIWQMAENIYH 410 (424)
Q Consensus 395 --~d~~i~iw~~~~~~~~ 410 (424)
.++.|.|||..++.+.
T Consensus 501 ~~~~~~i~v~D~~t~~~~ 518 (543)
T 1nir_A 501 KNDSSALVVVDDKTLKLK 518 (543)
T ss_dssp TTSCCEEEEEETTTTEEE
T ss_pred CCCCCeEEEEECCCceEE
Confidence 4799999999998653
No 137
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.91 E-value=2.2e-21 Score=177.95 Aligned_cols=251 Identities=9% Similarity=0.076 Sum_probs=183.7
Q ss_pred EeccCCceeEEEecCCCCcEEEEEec------CCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCCeeeEEecCCCCceE
Q 014472 121 QINHDGEVNRARYMPQNPFLIATKTV------SAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHL 194 (424)
Q Consensus 121 ~~~h~~~v~~i~~~p~~~~~latg~~------dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l 194 (424)
.......+..++|+|+++.++++... ++.|.+||..+ .+....+. ....+.+++|+|++..++
T Consensus 36 ~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~v~~~d~~~----------~~~~~~~~-~~~~~~~~~~s~dg~~l~ 104 (353)
T 3vgz_A 36 RKAVGKGAYEMAYSQQENALWLATSQSRKLDKGGVVYRLDPVT----------LEVTQAIH-NDLKPFGATINNTTQTLW 104 (353)
T ss_dssp EEEEESSEEEEEEETTTTEEEEEECCCTTTEESEEEEEECTTT----------CCEEEEEE-ESSCCCSEEEETTTTEEE
T ss_pred hhhhccCccceEECCCCCEEEEEcCCCcCCCCCccEEEEcCCC----------CeEEEEEe-cCCCcceEEECCCCCEEE
Confidence 34455678899999998855554433 67899999887 33344444 344578999999988556
Q ss_pred EEEeCCCcEEEEeCCCCCCCCcccceeeeecCCc---------ceeeEEeeCCCCcEEEEE-eCCCeEEEEECCCCCCCC
Q 014472 195 LSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEG---------VVEDVAWHLRHEYLFGSV-GDDQYLLIWDLRTPSVSK 264 (424)
Q Consensus 195 ~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~---------~v~~i~~~~~~~~~~~s~-~~dg~i~i~d~~~~~~~~ 264 (424)
+++..++.|.+||+.+++. +..+..+.. .+.+++|+|+++.+++++ +.++.|.+||+.+++.
T Consensus 105 v~~~~~~~v~~~d~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~-- 176 (353)
T 3vgz_A 105 FGNTVNSAVTAIDAKTGEV------KGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGGNIKL-- 176 (353)
T ss_dssp EEETTTTEEEEEETTTCCE------EEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEETTTTEE--
T ss_pred EEecCCCEEEEEeCCCCee------EEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceEEEEcCCCCce--
Confidence 6667789999999987642 222322221 278899999998777666 3588999999987653
Q ss_pred CeeEecccCCCeeEEEecCCCCeEEEEEeCCCcEEEEECCCCCCcceeecC----CCCCEEEEEEcCCCCcEEEEEeCCC
Q 014472 265 PVQSVVAHQSEVNCLAFNPFNEWILATGSTDKTVKLFDLRKISTALHTFDS----HKEEVFQVGWNPKNETILASCCLGR 340 (424)
Q Consensus 265 ~~~~~~~~~~~v~~i~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~----~~~~v~~~~~sp~~~~~l~s~~~dg 340 (424)
+..+..+...+.+++|+|+++. +++++.++.|.+||+.+ ++.+..+.. +...+..++|+|+++.++++...++
T Consensus 177 -~~~~~~~~~~~~~~~~s~dg~~-l~~~~~~~~i~~~d~~~-~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~ 253 (353)
T 3vgz_A 177 -KTAIQNTGKMSTGLALDSEGKR-LYTTNADGELITIDTAD-NKILSRKKLLDDGKEHFFINISLDTARQRAFITDSKAA 253 (353)
T ss_dssp -EEEECCCCTTCCCCEEETTTTE-EEEECTTSEEEEEETTT-TEEEEEEECCCSSSCCCEEEEEEETTTTEEEEEESSSS
T ss_pred -EEEecCCCCccceEEECCCCCE-EEEEcCCCeEEEEECCC-CeEEEEEEcCCCCCCcccceEEECCCCCEEEEEeCCCC
Confidence 4555445666899999999985 77778899999999987 565555543 4567889999999986666666679
Q ss_pred eEEEeeCCCCCcccCCCccCCCCCeeeEEEcCCCCCcceEEeCCCCCcEEEEEeCCCcEEEEecCCCCC
Q 014472 341 RLMVWDLSRIDEEQTPEDAEDGPPELLFIHGGHTSKISDFSWNPCEDWVISSVAEDNILQIWQMAENIY 409 (424)
Q Consensus 341 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~ 409 (424)
.|.+||+.++. .+....... ...++|+|++++++++...++.|.+||+.++..
T Consensus 254 ~v~~~d~~~~~--------------~~~~~~~~~--~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~ 306 (353)
T 3vgz_A 254 EVLVVDTRNGN--------------ILAKVAAPE--SLAVLFNPARNEAYVTHRQAGKVSVIDAKSYKV 306 (353)
T ss_dssp EEEEEETTTCC--------------EEEEEECSS--CCCEEEETTTTEEEEEETTTTEEEEEETTTTEE
T ss_pred EEEEEECCCCc--------------EEEEEEcCC--CceEEECCCCCEEEEEECCCCeEEEEECCCCeE
Confidence 99999998753 233333222 367999999997777776899999999987644
No 138
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.90 E-value=2.1e-21 Score=176.64 Aligned_cols=246 Identities=9% Similarity=0.073 Sum_probs=175.8
Q ss_pred EEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCCeeeEEecCCCCceEEEEeCCCcEEEEeCCC
Q 014472 131 ARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINA 210 (424)
Q Consensus 131 i~~~p~~~~~latg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~ 210 (424)
..|.+++..++++++.++.|.+||..+ .+....+..+...+ +++|+|++..+++++..++.|.+||+.+
T Consensus 3 ~~~~~~~~~~~v~~~~~~~v~~~d~~~----------~~~~~~~~~~~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~ 71 (331)
T 3u4y_A 3 AMFQTTSNFGIVVEQHLRRISFFSTDT----------LEILNQITLGYDFV-DTAITSDCSNVVVTSDFCQTLVQIETQL 71 (331)
T ss_dssp ----CCCCEEEEEEGGGTEEEEEETTT----------CCEEEEEECCCCEE-EEEECSSSCEEEEEESTTCEEEEEECSS
T ss_pred eeEcCCCCEEEEEecCCCeEEEEeCcc----------cceeeeEEccCCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCC
Confidence 345666777899999999999999987 33444555556666 9999999984444555589999999987
Q ss_pred CCCCCcccceeeeecCCcceeeEEeeCCCCcEEEEEeCC-C--eEEEEECCCCCCCCCeeEecccCCCeeEEEecCCCCe
Q 014472 211 APKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDD-Q--YLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEW 287 (424)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~~s~~~d-g--~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~ 287 (424)
+.. ....+..+..+..+++|+|+++.++ ++..+ + .|.+||+.+++. +..+. ......+++|+|++++
T Consensus 72 ~~~-----~~~~~~~~~~~~~~~~~s~dg~~l~-~~~~~~~~~~i~v~d~~~~~~---~~~~~-~~~~~~~~~~spdg~~ 141 (331)
T 3u4y_A 72 EPP-----KVVAIQEGQSSMADVDITPDDQFAV-TVTGLNHPFNMQSYSFLKNKF---ISTIP-IPYDAVGIAISPNGNG 141 (331)
T ss_dssp SSC-----EEEEEEECSSCCCCEEECTTSSEEE-ECCCSSSSCEEEEEETTTTEE---EEEEE-CCTTEEEEEECTTSSC
T ss_pred Cce-----eEEecccCCCCccceEECCCCCEEE-EecCCCCcccEEEEECCCCCe---EEEEE-CCCCccceEECCCCCE
Confidence 632 1334445555555599999998766 54444 3 899999988653 44443 3456799999999987
Q ss_pred EEEEEeCCCc-EEEEECCCCCCcc---eeecCCCCCEEEEEEcCCCCcEEEEEeCCCeEEEeeCCCCCcccCCCccCCCC
Q 014472 288 ILATGSTDKT-VKLFDLRKISTAL---HTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPEDAEDGP 363 (424)
Q Consensus 288 ~l~~g~~dg~-i~iwd~~~~~~~~---~~~~~~~~~v~~~~~sp~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~ 363 (424)
+++++..++. |.+|++...+... .........+..++|+|+++.+++++..++.|.+||+..+..
T Consensus 142 l~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~----------- 210 (331)
T 3u4y_A 142 LILIDRSSANTVRRFKIDADGVLFDTGQEFISGGTRPFNITFTPDGNFAFVANLIGNSIGILETQNPEN----------- 210 (331)
T ss_dssp EEEEEETTTTEEEEEEECTTCCEEEEEEEEECSSSSEEEEEECTTSSEEEEEETTTTEEEEEECSSTTS-----------
T ss_pred EEEEecCCCceEEEEEECCCCcEeecCCccccCCCCccceEECCCCCEEEEEeCCCCeEEEEECCCCcc-----------
Confidence 7777777788 9999998633321 112233566899999999986677777899999999986532
Q ss_pred CeeeEEEcCCCCCcceEEeCCCCCcEEEEEeCCCcEEEEecCCCCC
Q 014472 364 PELLFIHGGHTSKISDFSWNPCEDWVISSVAEDNILQIWQMAENIY 409 (424)
Q Consensus 364 ~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~ 409 (424)
...+..+..+ ..+..++|+|++++++++...++.|.+|++.++.+
T Consensus 211 ~~~~~~~~~~-~~~~~~~~spdg~~l~v~~~~~~~i~~~d~~~~~~ 255 (331)
T 3u4y_A 211 ITLLNAVGTN-NLPGTIVVSRDGSTVYVLTESTVDVFNFNQLSGTL 255 (331)
T ss_dssp CEEEEEEECS-SCCCCEEECTTSSEEEEECSSEEEEEEEETTTTEE
T ss_pred cceeeeccCC-CCCceEEECCCCCEEEEEEcCCCEEEEEECCCCce
Confidence 0113333333 56789999999997666666788999999988765
No 139
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.90 E-value=1.4e-22 Score=190.98 Aligned_cols=210 Identities=14% Similarity=0.157 Sum_probs=152.5
Q ss_pred CCeeeEEecCCCCceEEEEeCCCcEEEEeCCCCCCC-------Cccc--ceeeeecCCcceeeEEeeCCCCcEEE---EE
Q 014472 179 TEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKN-------KSLE--AMQIFKVHEGVVEDVAWHLRHEYLFG---SV 246 (424)
Q Consensus 179 ~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~-------~~~~--~~~~~~~~~~~v~~i~~~~~~~~~~~---s~ 246 (424)
..+..|++++.+. ++++++.++ +++|+....... .... .......+...|.+++|+|+++.+++ ++
T Consensus 37 ~~~n~lavs~~~~-~l~~~~~dg-v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~lav~~~sg 114 (434)
T 2oit_A 37 ERSSLLAVSNKYG-LVFAGGASG-LQIFPTKNLLIQNKPGDDPNKIVDKVQGLLVPMKFPIHHLALSCDNLTLSACMMSS 114 (434)
T ss_dssp SCCBCEEEETTTT-EEEEEETTE-EEEEEHHHHCCCCCTTCCTTCEEECCCCEEECCSSCEEEEEECTTSCEEEEEEEET
T ss_pred CCccEEEEecCCC-EEEEECCCE-EEEEEchHhhhhcccccCcccccccCccccccCCCcccEEEEcCCCCEEEEEEecc
Confidence 3578899999776 788888887 888875321100 0000 00011235678999999999986544 78
Q ss_pred eCCCeEEEEECCCC-----CCCCC---eeEecccCCCeeEEEecCCCCeEEEEEeCCCcEEEEECCCCCCcceeecCCCC
Q 014472 247 GDDQYLLIWDLRTP-----SVSKP---VQSVVAHQSEVNCLAFNPFNEWILATGSTDKTVKLFDLRKISTALHTFDSHKE 318 (424)
Q Consensus 247 ~~dg~i~i~d~~~~-----~~~~~---~~~~~~~~~~v~~i~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~~ 318 (424)
+.|+.|+|||+++. ...++ +..+.+|...|++++|+|++..+|++++.||+|++||+++ +..+.....|..
T Consensus 115 s~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~Dg~v~iwD~~~-~~~~~~~~~~~~ 193 (434)
T 2oit_A 115 EYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADGSIAVLQVTE-TVKVCATLPSTV 193 (434)
T ss_dssp TTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETTSCEEEEEESS-SEEEEEEECGGG
T ss_pred CCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEECCCeEEEEEcCC-CcceeeccCCCC
Confidence 88999999998764 11122 3445668999999999998555899999999999999998 455556667889
Q ss_pred CEEEEEEcCCCCcEEEEEeCCCeEEEeeCCCCCcccCCCccCCCCCeeeEEEc-------CCCCCcceEEeCCCCCcEEE
Q 014472 319 EVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPEDAEDGPPELLFIHG-------GHTSKISDFSWNPCEDWVIS 391 (424)
Q Consensus 319 ~v~~~~~sp~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~-------~h~~~v~~~~~~~~~~~~l~ 391 (424)
.|.+++|+|++. +|++|+.||.|++||++ +.. ...+. .|...|.+++|++++.++++
T Consensus 194 ~v~~v~wspdg~-~lasgs~dg~v~iwd~~-~~~--------------~~~~~~~~~~~~~~~~~v~~v~w~~~~~~l~~ 257 (434)
T 2oit_A 194 AVTSVCWSPKGK-QLAVGKQNGTVVQYLPT-LQE--------------KKVIPCPPFYESDHPVRVLDVLWIGTYVFAIV 257 (434)
T ss_dssp CEEEEEECTTSS-CEEEEETTSCEEEECTT-CCE--------------EEEECCCTTCCTTSCEEEEEEEEEETTEEEEE
T ss_pred ceeEEEEcCCCC-EEEEEcCCCcEEEEccC-Ccc--------------cccccCCcccCCCCceeEEEEEEecCceEEEE
Confidence 999999999986 68999999999999998 221 11121 23347899999998885555
Q ss_pred EEeCCCc------EEEEecCCC
Q 014472 392 SVAEDNI------LQIWQMAEN 407 (424)
Q Consensus 392 s~~~d~~------i~iw~~~~~ 407 (424)
..+.+|. +++|++...
T Consensus 258 ~~~~dg~~~~~~~v~i~~l~~~ 279 (434)
T 2oit_A 258 YAAADGTLETSPDVVMALLPKK 279 (434)
T ss_dssp EEETTCCSSSCCEEEEEECCCT
T ss_pred EccCCCccCCCCceEEEEeccC
Confidence 5555543 899999764
No 140
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.89 E-value=1.2e-21 Score=178.87 Aligned_cols=246 Identities=11% Similarity=0.111 Sum_probs=166.8
Q ss_pred CCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCCeeeEEecCCCCceEEEEeCC-CcEEEEeCCCCCCCC
Q 014472 137 NPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDD-AQICLWDINAAPKNK 215 (424)
Q Consensus 137 ~~~~latg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~d-g~i~vwd~~~~~~~~ 215 (424)
+..++++++.++.|++|++... +..... ....|...+.+++|+|++. +|++++.+ +.|.+|++.... .
T Consensus 4 ~~~l~~~~~~~~~v~~~~~~~~-------~~~~~~-~~~~~~~~~~~~~~spdg~-~l~~~~~~~~~v~~~~~~~~~--~ 72 (343)
T 1ri6_A 4 KQTVYIASPESQQIHVWNLNHE-------GALTLT-QVVDVPGQVQPMVVSPDKR-YLYVGVRPEFRVLAYRIAPDD--G 72 (343)
T ss_dssp EEEEEEEEGGGTEEEEEEECTT-------SCEEEE-EEEECSSCCCCEEECTTSS-EEEEEETTTTEEEEEEECTTT--C
T ss_pred eEEEEEeCCCCCeEEEEEECCC-------CcEEEe-eeEecCCCCceEEECCCCC-EEEEeecCCCeEEEEEecCCC--C
Confidence 3446666688999999998641 111222 2345777899999999988 57777765 999999997221 1
Q ss_pred cccceeeeecCCcceeeEEeeCCCCcEEEEEeCCCeEEEEECCCCCCCCCeeEecccCCCeeEEEecCCCCeEEEEEeCC
Q 014472 216 SLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATGSTD 295 (424)
Q Consensus 216 ~~~~~~~~~~~~~~v~~i~~~~~~~~~~~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~l~~g~~d 295 (424)
....+..+..+. .+..++|+|+++.+++++..++.|.+||+..+.....+..+. ....+.+++|+|+++++++++..+
T Consensus 73 ~~~~~~~~~~~~-~~~~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~-~~~~~~~~~~s~dg~~l~~~~~~~ 150 (343)
T 1ri6_A 73 ALTFAAESALPG-SLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVE-GLDGCHSANISPDNRTLWVPALKQ 150 (343)
T ss_dssp CEEEEEEEECSS-CCSEEEECTTSSEEEEEETTTTEEEEEEEETTEEEEEEEEEC-CCTTBCCCEECTTSSEEEEEEGGG
T ss_pred ceeeccccccCC-CCcEEEEcCCCCEEEEEecCCCeEEEEECCCCcccccccccc-CCCCceEEEECCCCCEEEEecCCC
Confidence 122333344333 789999999998777676679999999995322112233333 345689999999998655554489
Q ss_pred CcEEEEECCCCCCcce----eec-CCCCCEEEEEEcCCCCcEEEEEeCCCeEEEeeCCCCCcccCCCccCCCCCeeeEEE
Q 014472 296 KTVKLFDLRKISTALH----TFD-SHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPEDAEDGPPELLFIH 370 (424)
Q Consensus 296 g~i~iwd~~~~~~~~~----~~~-~~~~~v~~~~~sp~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 370 (424)
+.|.+||+...+.... .+. .....+..++|+|+++.+++++..++.|.+|++..... ........
T Consensus 151 ~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~~~~~i~~~~~~~~~g----------~~~~~~~~ 220 (343)
T 1ri6_A 151 DRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHG----------NIECVQTL 220 (343)
T ss_dssp TEEEEEEECTTSCEEEEEEEEEECSTTCCEEEEEECTTSSEEEEEETTTTEEEEEESSCTTS----------CCEEEEEE
T ss_pred CEEEEEEecCCCceeeecccccccCCCCCcceEEECCCCCEEEEEeCCCCEEEEEEecCCCC----------cEEEEeec
Confidence 9999999986333221 222 23457889999999986666666899999999964211 01112111
Q ss_pred c----CC--CCCcceEEeCCCCCcEEEEEeCCCcEEEEecC
Q 014472 371 G----GH--TSKISDFSWNPCEDWVISSVAEDNILQIWQMA 405 (424)
Q Consensus 371 ~----~h--~~~v~~~~~~~~~~~~l~s~~~d~~i~iw~~~ 405 (424)
. ++ ...+..++|+|+++++++++..++.|.+|++.
T Consensus 221 ~~~~~~~~~~~~~~~i~~s~dg~~l~v~~~~~~~i~v~d~~ 261 (343)
T 1ri6_A 221 DMMPENFSDTRWAADIHITPDGRHLYACDRTASLITVFSVS 261 (343)
T ss_dssp ECSCTTCCSCCCEEEEEECTTSSEEEEEETTTTEEEEEEEC
T ss_pred cccCccccccCCccceEECCCCCEEEEEecCCCEEEEEEEc
Confidence 1 11 23466899999999776677789999999998
No 141
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.89 E-value=2.6e-21 Score=172.45 Aligned_cols=228 Identities=9% Similarity=0.007 Sum_probs=164.9
Q ss_pred EEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCCeeeEEecCCCCceEEEEeCCCcEEEEeCCC-CCCCCccccee
Q 014472 143 TKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINA-APKNKSLEAMQ 221 (424)
Q Consensus 143 tg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~-~~~~~~~~~~~ 221 (424)
.++.++.|++||+.. .....+..|...+.+++|+|++. +|++++ ++.|.+||+.+ +.. ..
T Consensus 17 ~~~~~~~i~~~d~~~-----------~~~~~~~~~~~~v~~~~~spdg~-~l~~~~-~~~i~~~d~~~~~~~------~~ 77 (297)
T 2ojh_A 17 GGSMRSSIEIFNIRT-----------RKMRVVWQTPELFEAPNWSPDGK-YLLLNS-EGLLYRLSLAGDPSP------EK 77 (297)
T ss_dssp -CCCCEEEEEEETTT-----------TEEEEEEEESSCCEEEEECTTSS-EEEEEE-TTEEEEEESSSCCSC------EE
T ss_pred CCCcceeEEEEeCCC-----------CceeeeccCCcceEeeEECCCCC-EEEEEc-CCeEEEEeCCCCCCc------eE
Confidence 346789999999976 22345667889999999999988 677766 78999999987 532 22
Q ss_pred eeecC-CcceeeEEeeCCCCcEEEEEe--CCCeEEEE--ECCCCCCCCCeeEecccCCCeeEEEecCCCCeEEEEEeCCC
Q 014472 222 IFKVH-EGVVEDVAWHLRHEYLFGSVG--DDQYLLIW--DLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATGSTDK 296 (424)
Q Consensus 222 ~~~~~-~~~v~~i~~~~~~~~~~~s~~--~dg~i~i~--d~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~l~~g~~dg 296 (424)
....+ ...+.+++|+|+++.++ +++ .++...|| ++.... ...+.. ...+..++|+|+++.++++++.++
T Consensus 78 ~~~~~~~~~~~~~~~spdg~~l~-~~~~~~~~~~~l~~~~~~~~~----~~~~~~-~~~~~~~~~spdg~~l~~~~~~~~ 151 (297)
T 2ojh_A 78 VDTGFATICNNDHGISPDGALYA-ISDKVEFGKSAIYLLPSTGGT----PRLMTK-NLPSYWHGWSPDGKSFTYCGIRDQ 151 (297)
T ss_dssp CCCTTCCCBCSCCEECTTSSEEE-EEECTTTSSCEEEEEETTCCC----CEECCS-SSSEEEEEECTTSSEEEEEEEETT
T ss_pred eccccccccccceEECCCCCEEE-EEEeCCCCcceEEEEECCCCc----eEEeec-CCCccceEECCCCCEEEEEECCCC
Confidence 23334 46789999999998554 666 33445555 444433 233333 345899999999997666888899
Q ss_pred cEEEEECCCCCCcceeecCCCCCEEEEEEcCCCCcEEEEEeCCCeEEEeeCCCCCcccCCCccCCCCCeeeEEEcCCCCC
Q 014472 297 TVKLFDLRKISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPEDAEDGPPELLFIHGGHTSK 376 (424)
Q Consensus 297 ~i~iwd~~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~ 376 (424)
.+++|+++........+..+...+.+++|+|+++.+++++..++.++||++.... ..+..+..|...
T Consensus 152 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~-------------~~~~~~~~~~~~ 218 (297)
T 2ojh_A 152 VFDIYSMDIDSGVETRLTHGEGRNDGPDYSPDGRWIYFNSSRTGQMQIWRVRVDG-------------SSVERITDSAYG 218 (297)
T ss_dssp EEEEEEEETTTCCEEECCCSSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTS-------------SCEEECCCCSEE
T ss_pred ceEEEEEECCCCcceEcccCCCccccceECCCCCEEEEEecCCCCccEEEECCCC-------------CCcEEEecCCcc
Confidence 9999997543455667777888999999999997555555568999999886321 224455667777
Q ss_pred cceEEeCCCCCcEEEEEeCC-----------CcEEEEecCCCCC
Q 014472 377 ISDFSWNPCEDWVISSVAED-----------NILQIWQMAENIY 409 (424)
Q Consensus 377 v~~~~~~~~~~~~l~s~~~d-----------~~i~iw~~~~~~~ 409 (424)
+..++|+|++++ |++++.+ +.|++|++.++..
T Consensus 219 ~~~~~~s~dg~~-l~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~ 261 (297)
T 2ojh_A 219 DWFPHPSPSGDK-VVFVSYDADVFDHPRDLDVRVQLMDMDGGNV 261 (297)
T ss_dssp EEEEEECTTSSE-EEEEEEETTCCSCCSSEEEEEEEEETTSCSC
T ss_pred cCCeEECCCCCE-EEEEEcCCCCCcccccCceEEEEEecCCCCc
Confidence 899999999995 5555544 5699999987644
No 142
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.89 E-value=8.5e-20 Score=167.29 Aligned_cols=238 Identities=13% Similarity=0.093 Sum_probs=173.4
Q ss_pred EEEeccCCceeEEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCC---------CeeeEEecCC
Q 014472 119 IQQINHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHST---------EGYGLSWSKF 189 (424)
Q Consensus 119 ~~~~~h~~~v~~i~~~p~~~~~latg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~h~~---------~v~~l~~~~~ 189 (424)
...+.....+..++|+|+++.+++++..++.|.+||..+ .+....+..+.. .+.+++|+|+
T Consensus 82 ~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~d 151 (353)
T 3vgz_A 82 TQAIHNDLKPFGATINNTTQTLWFGNTVNSAVTAIDAKT----------GEVKGRLVLDDRKRTEEVRPLQPRELVADDA 151 (353)
T ss_dssp EEEEEESSCCCSEEEETTTTEEEEEETTTTEEEEEETTT----------CCEEEEEESCCCCCCSSCCCCEEEEEEEETT
T ss_pred EEEEecCCCcceEEECCCCCEEEEEecCCCEEEEEeCCC----------CeeEEEEecCCCccccccCCCCCceEEECCC
Confidence 344555667889999999987777777789999999987 333444444332 2688999999
Q ss_pred CCceEEEEe--CCCcEEEEeCCCCCCCCcccceeeeecCCcceeeEEeeCCCCcEEEEEeCCCeEEEEECCCCCCCCCee
Q 014472 190 KEGHLLSGS--DDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQ 267 (424)
Q Consensus 190 ~~~~l~s~~--~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~~s~~~dg~i~i~d~~~~~~~~~~~ 267 (424)
+.. +++++ .++.|.+||+.++. ....+..+...+..++|+|+++.++ +++.++.|.+||+.+++. +.
T Consensus 152 g~~-l~~~~~~~~~~i~~~d~~~~~------~~~~~~~~~~~~~~~~~s~dg~~l~-~~~~~~~i~~~d~~~~~~---~~ 220 (353)
T 3vgz_A 152 TNT-VYISGIGKESVIWVVDGGNIK------LKTAIQNTGKMSTGLALDSEGKRLY-TTNADGELITIDTADNKI---LS 220 (353)
T ss_dssp TTE-EEEEEESSSCEEEEEETTTTE------EEEEECCCCTTCCCCEEETTTTEEE-EECTTSEEEEEETTTTEE---EE
T ss_pred CCE-EEEEecCCCceEEEEcCCCCc------eEEEecCCCCccceEEECCCCCEEE-EEcCCCeEEEEECCCCeE---EE
Confidence 884 55444 58899999997662 2333443555688999999998665 667799999999988653 33
Q ss_pred Eecc----cCCCeeEEEecCCCCeEEEEEeCCCcEEEEECCCCCCcceeecCCCCCEEEEEEcCCCCcEEEEEeCCCeEE
Q 014472 268 SVVA----HQSEVNCLAFNPFNEWILATGSTDKTVKLFDLRKISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLM 343 (424)
Q Consensus 268 ~~~~----~~~~v~~i~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~s~~~dg~i~ 343 (424)
.+.. +...+..++|+|+++.++++...++.|.+||+.+ ++.+..+.... ...++|+|+++.++++...++.|.
T Consensus 221 ~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~-~~~~~~~~~~~--~~~~~~s~dg~~l~v~~~~~~~v~ 297 (353)
T 3vgz_A 221 RKKLLDDGKEHFFINISLDTARQRAFITDSKAAEVLVVDTRN-GNILAKVAAPE--SLAVLFNPARNEAYVTHRQAGKVS 297 (353)
T ss_dssp EEECCCSSSCCCEEEEEEETTTTEEEEEESSSSEEEEEETTT-CCEEEEEECSS--CCCEEEETTTTEEEEEETTTTEEE
T ss_pred EEEcCCCCCCcccceEEECCCCCEEEEEeCCCCEEEEEECCC-CcEEEEEEcCC--CceEEECCCCCEEEEEECCCCeEE
Confidence 3332 4556888999999997666666679999999987 56666665433 257999999986677776899999
Q ss_pred EeeCCCCCcccCCCccCCCCCeeeEEEcCCCCCcceEEeCCCCCcEEEEEeC
Q 014472 344 VWDLSRIDEEQTPEDAEDGPPELLFIHGGHTSKISDFSWNPCEDWVISSVAE 395 (424)
Q Consensus 344 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~ 395 (424)
+||+.++ +.+..+..+ ..+.+++|+|++++++++...
T Consensus 298 ~~d~~~~--------------~~~~~~~~~-~~~~~~~~s~dg~~l~v~~~~ 334 (353)
T 3vgz_A 298 VIDAKSY--------------KVVKTFDTP-THPNSLALSADGKTLYVSVKQ 334 (353)
T ss_dssp EEETTTT--------------EEEEEEECC-SEEEEEEECTTSCEEEEEEEC
T ss_pred EEECCCC--------------eEEEEEecC-CCCCeEEEcCCCCEEEEEEcc
Confidence 9999875 334444333 357899999999965555543
No 143
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.88 E-value=2e-20 Score=188.97 Aligned_cols=242 Identities=7% Similarity=-0.025 Sum_probs=171.9
Q ss_pred CceeEEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCCeeeEEecCCCCceEEEEeCCCcEEE
Q 014472 126 GEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDDAQICL 205 (424)
Q Consensus 126 ~~v~~i~~~p~~~~~latg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~v 205 (424)
..|.+++|+|+++ .|++++. +.|++||+.... ......+..|...+.+++|+|+|+ +|+.++ ++.|.+
T Consensus 109 ~~v~~~~~SpDg~-~l~~~~~-~~i~~~d~~~~~--------~~~~~~l~~~~~~~~~~~~SPDG~-~la~~~-~~~i~~ 176 (741)
T 2ecf_A 109 TGIVDYQWSPDAQ-RLLFPLG-GELYLYDLKQEG--------KAAVRQLTHGEGFATDAKLSPKGG-FVSFIR-GRNLWV 176 (741)
T ss_dssp EESCCCEECTTSS-EEEEEET-TEEEEEESSSCS--------TTSCCBCCCSSSCEEEEEECTTSS-EEEEEE-TTEEEE
T ss_pred cCcceeEECCCCC-EEEEEeC-CcEEEEECCCCC--------cceEEEcccCCcccccccCCCCCC-EEEEEe-CCcEEE
Confidence 4588999999998 5666664 999999998710 002334566778899999999998 677776 469999
Q ss_pred EeCCCCCCCCcccceeeeecCCc----------------ceeeEEeeCCCCcEEEEEeCCC-------------------
Q 014472 206 WDINAAPKNKSLEAMQIFKVHEG----------------VVEDVAWHLRHEYLFGSVGDDQ------------------- 250 (424)
Q Consensus 206 wd~~~~~~~~~~~~~~~~~~~~~----------------~v~~i~~~~~~~~~~~s~~~dg------------------- 250 (424)
||+.++.. ......+.. .+..++|+|+++.++ +++.|+
T Consensus 177 ~d~~~g~~------~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~-~~~~d~~~~~~~~~~~~~p~~~~~~ 249 (741)
T 2ecf_A 177 IDLASGRQ------MQLTADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIA-YARIDESPVPVQKRYEVYADRTDVI 249 (741)
T ss_dssp EETTTTEE------EECCCCCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEE-EEEEECTTSCEEEEEEECSSCEEEE
T ss_pred EecCCCCE------EEeccCCccceeccccceeeeeccccccceEECCCCCEEE-EEEEcCCCCceEecCCCCCCcccce
Confidence 99986522 111111222 247899999998765 555444
Q ss_pred --------------eEEEEECCC-CCCCCCeeEe--cccCCCeeEEEecCCCCeEEEEEe----CCCcEEEEECCCCCCc
Q 014472 251 --------------YLLIWDLRT-PSVSKPVQSV--VAHQSEVNCLAFNPFNEWILATGS----TDKTVKLFDLRKISTA 309 (424)
Q Consensus 251 --------------~i~i~d~~~-~~~~~~~~~~--~~~~~~v~~i~~~~~~~~~l~~g~----~dg~i~iwd~~~~~~~ 309 (424)
.|.+||+.+ ++. .... ..|...+..++| |+|+.+++++. .+..|++||+.+ +..
T Consensus 250 ~~~~~~~g~~~~~~~l~~~d~~~~~~~---~~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~-g~~ 324 (741)
T 2ecf_A 250 EQRYPAAGDANVQVKLGVISPAEQAQT---QWIDLGKEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLAS-NQQ 324 (741)
T ss_dssp EEECCBTTSCCCEEEEEEECSSTTCCC---EEECCCSCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTT-CCE
T ss_pred EeecCCCCCCCCeeEEEEEECCCCCce---EEecCCCCcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCC-Cce
Confidence 788999987 653 2221 146778999999 99996444433 356899999987 555
Q ss_pred ceeecCCCC----CEEEEEEcCCCCcEEEEEeCCCeEEEeeCCCCCcccCCCccCCCCCeeeEEEcCCCCCcceE-EeCC
Q 014472 310 LHTFDSHKE----EVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPEDAEDGPPELLFIHGGHTSKISDF-SWNP 384 (424)
Q Consensus 310 ~~~~~~~~~----~v~~~~~sp~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~-~~~~ 384 (424)
...+..+.. .+..++|+|+++ ++++++.||.++||.+.... . ...+..|...|..+ .|+|
T Consensus 325 ~~~~~~~~~~~~~~~~~~~~spdg~-~~~~~~~~g~~~l~~~~~~~-------------~-~~~l~~~~~~v~~~~~~s~ 389 (741)
T 2ecf_A 325 RVLAHETSPTWVPLHNSLRFLDDGS-ILWSSERTGFQHLYRIDSKG-------------K-AAALTHGNWSVDELLAVDE 389 (741)
T ss_dssp EEEEEEECSSCCCCCSCCEECTTSC-EEEEECTTSSCEEEEECSSS-------------C-EEESCCSSSCEEEEEEEET
T ss_pred EEEEEcCCCCcCCcCCceEECCCCe-EEEEecCCCccEEEEEcCCC-------------C-eeeeeecceEEEeEeEEeC
Confidence 555544433 456899999997 88899999988888776321 2 44556677778887 5999
Q ss_pred CCCcEEEEEeCCC--cEEEEecCC
Q 014472 385 CEDWVISSVAEDN--ILQIWQMAE 406 (424)
Q Consensus 385 ~~~~~l~s~~~d~--~i~iw~~~~ 406 (424)
+++.++++++.++ .++||++..
T Consensus 390 dg~~l~~~~~~~~~~~~~l~~~~~ 413 (741)
T 2ecf_A 390 KAGLAYFRAGIESARESQIYAVPL 413 (741)
T ss_dssp TTTEEEEEECSSCTTCBEEEEEET
T ss_pred CCCEEEEEEeCCCCceEEEEEEEc
Confidence 9996667777666 899999863
No 144
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.88 E-value=1e-19 Score=167.83 Aligned_cols=294 Identities=11% Similarity=0.128 Sum_probs=183.2
Q ss_pred eEEEEEeecCCCCCCCeEEEEEEEcCCCCCCcccCCCCCcCCCCCCCCCCCCcEEEEEEe--ccCCceeEEEecCCCCcE
Q 014472 63 VQKMILGTHTSENEPNYLMLAQVQLPLDDSENDARHYDDDRSDFGGFGCANGKVQIIQQI--NHDGEVNRARYMPQNPFL 140 (424)
Q Consensus 63 ~~~~~~gt~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~h~~~v~~i~~~p~~~~~ 140 (424)
.+++++|+++.+ ..|++..++.. .+++..+... .....+..++|+|+++ +
T Consensus 2 ~~~~~vg~~~~~---~~i~~~~~d~~------------------------~g~l~~~~~~~~~~~~~~~~~a~spdg~-~ 53 (365)
T 1jof_A 2 LHHLMIGTWTPP---GAIFTVQFDDE------------------------KLTCKLIKRTEIPQDEPISWMTFDHERK-N 53 (365)
T ss_dssp EEEEEEEESSSS---CEEEEEEEETT------------------------TTEEEEEEEEECCTTCCCSEEEECTTSS-E
T ss_pred cEEEEEEEccCC---CcEEEEEEECC------------------------CCCEEEeeEEccCCCCCCcEEEECCCCC-E
Confidence 367889998753 35666666411 2344444433 3445788999999997 5
Q ss_pred EEEEecCCeEEEEeCC-CCCCCCCCCCCCCCcEEEecCCCCeeeEEecCCCCc-eEEEEe-------------CCCcEEE
Q 014472 141 IATKTVSAEVYVFDYS-KHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEG-HLLSGS-------------DDAQICL 205 (424)
Q Consensus 141 latg~~dg~v~iwd~~-~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~-~l~s~~-------------~dg~i~v 205 (424)
|++++.+ .|.+|++. . +..........+ +.+.+++|+|++.. ++++++ .+|.+.+
T Consensus 54 l~~~~~~-~v~~~~~~~~--------g~~~~~~~~~~~-g~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~g~v~v 123 (365)
T 1jof_A 54 IYGAAMK-KWSSFAVKSP--------TEIVHEASHPIG-GHPRANDADTNTRAIFLLAAKQPPYAVYANPFYKFAGYGNV 123 (365)
T ss_dssp EEEEEBT-EEEEEEEEET--------TEEEEEEEEECC-SSGGGGCTTSCCEEEEEEECSSTTCCEEEEEESSSCCEEEE
T ss_pred EEEEccc-eEEEEEECCC--------CCEEEeeEeecC-CCCccEEECCCCCEEEEEEecCCcceeccceeecCCceEEE
Confidence 6676766 99999986 4 111111111111 34677999998874 244553 6899999
Q ss_pred EeCCCCCCCCcccceeeee-cCCcceeeEEeeCCCCcEEEEEeCCCeEEEEECC-CCCCCCCeeEec--ccCCCeeEEEe
Q 014472 206 WDINAAPKNKSLEAMQIFK-VHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLR-TPSVSKPVQSVV--AHQSEVNCLAF 281 (424)
Q Consensus 206 wd~~~~~~~~~~~~~~~~~-~~~~~v~~i~~~~~~~~~~~s~~~dg~i~i~d~~-~~~~~~~~~~~~--~~~~~v~~i~~ 281 (424)
|++..... ....+..+. .+...+.+++|+|+++.++++...++.|++||+. +++. ..+..+. .|...+..++|
T Consensus 124 ~~~~~~g~--~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~v~~~~~~~~g~~-~~~~~~~~~~~g~~p~~~~~ 200 (365)
T 1jof_A 124 FSVSETGK--LEKNVQNYEYQENTGIHGMVFDPTETYLYSADLTANKLWTHRKLASGEV-ELVGSVDAPDPGDHPRWVAM 200 (365)
T ss_dssp EEECTTCC--EEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCE-EEEEEEECSSTTCCEEEEEE
T ss_pred EccCCCCc--CcceEeeEEeCCCCcceEEEECCCCCEEEEEcCCCCEEEEEEECCCCCE-EEeeeEecCCCCCCCCEeEE
Confidence 99974211 111111111 2456789999999998776554457899999998 5442 1222232 23567999999
Q ss_pred cCCCCeEEEEEeCCCcEEEEECCCC-CCcc------eeecC----CCC------CEEEEE-EcCCCCcEEEEEeCCC---
Q 014472 282 NPFNEWILATGSTDKTVKLFDLRKI-STAL------HTFDS----HKE------EVFQVG-WNPKNETILASCCLGR--- 340 (424)
Q Consensus 282 ~~~~~~~l~~g~~dg~i~iwd~~~~-~~~~------~~~~~----~~~------~v~~~~-~sp~~~~~l~s~~~dg--- 340 (424)
+|+|++++++...++.|.+|++... +... ..+.. |.. .+..++ |+|+++.++++...++
T Consensus 201 spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~~~~~~~~ 280 (365)
T 1jof_A 201 HPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFASSRANKFEL 280 (365)
T ss_dssp CTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEESSTTS
T ss_pred CCCCCEEEEEECCCCeEEEEEEeCCCCcEEEccceEEcCCCCcCCcccccccccccccEEEECCCCCEEEEECCCCCCCC
Confidence 9999864444445789999987631 3221 11211 122 588999 9999975444433333
Q ss_pred --eEEEeeCCCCCcccCCCccCCCCCeeeE-EEcCCCCCcceEEeCC---CCCcEEEEEeC-CCcEEEEecCCCCC
Q 014472 341 --RLMVWDLSRIDEEQTPEDAEDGPPELLF-IHGGHTSKISDFSWNP---CEDWVISSVAE-DNILQIWQMAENIY 409 (424)
Q Consensus 341 --~i~iwd~~~~~~~~~~~~~~~~~~~~~~-~~~~h~~~v~~~~~~~---~~~~~l~s~~~-d~~i~iw~~~~~~~ 409 (424)
.|.+|++..... ...+. ....+...+..++|+| ++++ |++++. ++.|.+|++....+
T Consensus 281 ~~~i~v~~~~~~g~-----------~~~~~~~~~~~~~~~~~~a~sp~~~dg~~-l~v~~~~~~~v~v~~~~~~~l 344 (365)
T 1jof_A 281 QGYIAGFKLRDCGS-----------IEKQLFLSPTPTSGGHSNAVSPCPWSDEW-MAITDDQEGWLEIYRWKDEFL 344 (365)
T ss_dssp CCEEEEEEECTTSC-----------EEEEEEEEECSSCCTTCCCEEECTTCTTE-EEEECSSSCEEEEEEEETTEE
T ss_pred CCeEEEEEECCCCC-----------EEEeeeeeecCCCCcccceecCCCcCCCE-EEEEEcCCCeEEEEEEchhhC
Confidence 899999863111 01111 1333455678899999 8995 555554 59999999976533
No 145
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.87 E-value=4.5e-20 Score=167.86 Aligned_cols=247 Identities=13% Similarity=0.027 Sum_probs=171.3
Q ss_pred EEEeccCC---ceeEEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEec-C----CCCeeeEEecCCC
Q 014472 119 IQQINHDG---EVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRG-H----STEGYGLSWSKFK 190 (424)
Q Consensus 119 ~~~~~h~~---~v~~i~~~p~~~~~latg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~-h----~~~v~~l~~~~~~ 190 (424)
...+.+.. .+..++|+|+++.+++++..++.|.+||+.+ ......+.. + ...+.+++|+|++
T Consensus 24 ~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~----------~~~~~~~~~~~~~~~~~~~~~~~~s~dg 93 (337)
T 1pby_B 24 DKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVT----------GETLGRIDLSTPEERVKSLFGAALSPDG 93 (337)
T ss_dssp EEEEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTT----------CCEEEEEECCBTTEEEECTTCEEECTTS
T ss_pred EEEEEcCCCCCCccceEEcCCCCEEEEEeCCCCeEEEEECCC----------CCeEeeEEcCCcccccccccceEECCCC
Confidence 33444444 5889999999987778888889999999876 233333332 1 2267889999998
Q ss_pred CceEEEEe------------CCCcEEEEeCCCCCCCCcccceeeeecCCcceeeEEeeCCCCcEEEEEeCCCeEEEEECC
Q 014472 191 EGHLLSGS------------DDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLR 258 (424)
Q Consensus 191 ~~~l~s~~------------~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~~s~~~dg~i~i~d~~ 258 (424)
. +|++++ .++.|.+||+.++. ....+. ....+.+++|+|+++.++++ ++.|.+||+.
T Consensus 94 ~-~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~------~~~~~~-~~~~~~~~~~s~dg~~l~~~---~~~i~~~d~~ 162 (337)
T 1pby_B 94 K-TLAIYESPVRLELTHFEVQPTRVALYDAETLS------RRKAFE-APRQITMLAWARDGSKLYGL---GRDLHVMDPE 162 (337)
T ss_dssp S-EEEEEEEEEEECSSCEEECCCEEEEEETTTTE------EEEEEE-CCSSCCCEEECTTSSCEEEE---SSSEEEEETT
T ss_pred C-EEEEEecccccccccccccCceEEEEECCCCc------EEEEEe-CCCCcceeEECCCCCEEEEe---CCeEEEEECC
Confidence 7 576665 57999999997652 222333 24567889999999877644 6889999998
Q ss_pred CCCCCCCeeEecccCCCeeEEEecCCCCeEEEEEeCCC-----------------------cEEEEECCCCCCcceeecC
Q 014472 259 TPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATGSTDK-----------------------TVKLFDLRKISTALHTFDS 315 (424)
Q Consensus 259 ~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~l~~g~~dg-----------------------~i~iwd~~~~~~~~~~~~~ 315 (424)
+++. +..+..+. ....+.|+|++..+++++..++ .|.+||+.+.......+..
T Consensus 163 ~~~~---~~~~~~~~-~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~ 238 (337)
T 1pby_B 163 AGTL---VEDKPIQS-WEAETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMREVRI 238 (337)
T ss_dssp TTEE---EEEECSTT-TTTTTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEEEEEEEE
T ss_pred CCcE---eeeeeccc-cCCCceeCCCccEEeeeccCCCceeeeeeccccccccccccccccceEEEeCCCCCceEeecCC
Confidence 8653 33333322 1112378998886544443333 4689999873322333445
Q ss_pred CCCCEEEEEEcCCCCcEEEEEeCCCeEEEeeCCCCCcccCCCccCCCCCeeeEEEcCCCCCcceEEeCCCCCcEEEEEeC
Q 014472 316 HKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPEDAEDGPPELLFIHGGHTSKISDFSWNPCEDWVISSVAE 395 (424)
Q Consensus 316 ~~~~v~~~~~sp~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~ 395 (424)
+...+.+++|+|+++. |+++ ++.|.+||+.++ +.+..+..+ ..+.+++|+|++++ |++++.
T Consensus 239 ~~~~~~~~~~s~dg~~-l~~~--~~~v~~~d~~~~--------------~~~~~~~~~-~~~~~~~~s~dg~~-l~~~~~ 299 (337)
T 1pby_B 239 MDVFYFSTAVNPAKTR-AFGA--YNVLESFDLEKN--------------ASIKRVPLP-HSYYSVNVSTDGST-VWLGGA 299 (337)
T ss_dssp CSSCEEEEEECTTSSE-EEEE--ESEEEEEETTTT--------------EEEEEEECS-SCCCEEEECTTSCE-EEEESB
T ss_pred CCCceeeEEECCCCCE-EEEe--CCeEEEEECCCC--------------cCcceecCC-CceeeEEECCCCCE-EEEEcC
Confidence 6678899999999974 5555 689999999864 333333322 35789999999994 566688
Q ss_pred CCcEEEEecCCCCC
Q 014472 396 DNILQIWQMAENIY 409 (424)
Q Consensus 396 d~~i~iw~~~~~~~ 409 (424)
++.|++|++.++..
T Consensus 300 ~~~i~v~d~~~~~~ 313 (337)
T 1pby_B 300 LGDLAAYDAETLEK 313 (337)
T ss_dssp SSEEEEEETTTCCE
T ss_pred CCcEEEEECcCCcE
Confidence 99999999988753
No 146
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.87 E-value=2.1e-20 Score=188.75 Aligned_cols=241 Identities=11% Similarity=0.155 Sum_probs=167.1
Q ss_pred CCceeEEEecCCCCcEEEEEec-CC-----eEEEEeCCCCCCCCCCCCCCCCcEEEecCC--------------------
Q 014472 125 DGEVNRARYMPQNPFLIATKTV-SA-----EVYVFDYSKHPSKPPLDGACSPDLRLRGHS-------------------- 178 (424)
Q Consensus 125 ~~~v~~i~~~p~~~~~latg~~-dg-----~v~iwd~~~~~~~~~~~~~~~~~~~~~~h~-------------------- 178 (424)
...|..++|+|+|+ .||+++. ++ .|++||+.+ ......+..+.
T Consensus 36 ~~~~~~~~~SpdG~-~la~~~~~d~~~~~~~i~~~d~~~----------g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 104 (741)
T 2ecf_A 36 GPTLMKPKVAPDGS-RVTFLRGKDSDRNQLDLWSYDIGS----------GQTRLLVDSKVVLPGTETLSDEEKARRERQR 104 (741)
T ss_dssp CCCCEEEEECTTSS-EEEEEECCSSCTTEEEEEEEETTT----------CCEEEEECGGGTC------------------
T ss_pred CCCCCCceEecCCC-EEEEEeccCCCCcccEEEEEECCC----------CceeEccchhhcccccccccchhhhhhhhhh
Confidence 45688999999997 6777777 88 999999987 22222333222
Q ss_pred ----CCeeeEEecCCCCceEEEEeCCCcEEEEeCCCCCCCCcccceeeeecCCcceeeEEeeCCCCcEEEEEeCCCeEEE
Q 014472 179 ----TEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLI 254 (424)
Q Consensus 179 ----~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~~s~~~dg~i~i 254 (424)
..+.+++|+|+++ +|++++. +.|.+||+.++... ....+..|...+..++|+|+|+.+ +.++ ++.|++
T Consensus 105 ~~~~~~v~~~~~SpDg~-~l~~~~~-~~i~~~d~~~~~~~----~~~~l~~~~~~~~~~~~SPDG~~l-a~~~-~~~i~~ 176 (741)
T 2ecf_A 105 IAAMTGIVDYQWSPDAQ-RLLFPLG-GELYLYDLKQEGKA----AVRQLTHGEGFATDAKLSPKGGFV-SFIR-GRNLWV 176 (741)
T ss_dssp --CCEESCCCEECTTSS-EEEEEET-TEEEEEESSSCSTT----SCCBCCCSSSCEEEEEECTTSSEE-EEEE-TTEEEE
T ss_pred hccccCcceeEECCCCC-EEEEEeC-CcEEEEECCCCCcc----eEEEcccCCcccccccCCCCCCEE-EEEe-CCcEEE
Confidence 2378999999998 6777776 99999999876200 112344577889999999999855 4555 569999
Q ss_pred EECCCCCCCCCeeEecccCC----------------CeeEEEecCCCCeEEEEEeCCC----------------------
Q 014472 255 WDLRTPSVSKPVQSVVAHQS----------------EVNCLAFNPFNEWILATGSTDK---------------------- 296 (424)
Q Consensus 255 ~d~~~~~~~~~~~~~~~~~~----------------~v~~i~~~~~~~~~l~~g~~dg---------------------- 296 (424)
||+.++.. ......+.. .+.+++|+|+|+. |++++.|+
T Consensus 177 ~d~~~g~~---~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~-l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~ 252 (741)
T 2ecf_A 177 IDLASGRQ---MQLTADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSA-IAYARIDESPVPVQKRYEVYADRTDVIEQR 252 (741)
T ss_dssp EETTTTEE---EECCCCCCSSEEESCCCHHHHHHSCCCCSEEECTTSSC-EEEEEEECTTSCEEEEEEECSSCEEEEEEE
T ss_pred EecCCCCE---EEeccCCccceeccccceeeeeccccccceEECCCCCE-EEEEEEcCCCCceEecCCCCCCcccceEee
Confidence 99987542 221122222 1478999999996 66665554
Q ss_pred -----------cEEEEECCC-CCCcceeec--CCCCCEEEEEEcCCCCcEEEEEe----CCCeEEEeeCCCCCcccCCCc
Q 014472 297 -----------TVKLFDLRK-ISTALHTFD--SHKEEVFQVGWNPKNETILASCC----LGRRLMVWDLSRIDEEQTPED 358 (424)
Q Consensus 297 -----------~i~iwd~~~-~~~~~~~~~--~~~~~v~~~~~sp~~~~~l~s~~----~dg~i~iwd~~~~~~~~~~~~ 358 (424)
.|.+||+.+ .. ...... .|...+..++| |+++.+++++. .+..|.+||+.++..
T Consensus 253 ~~~~g~~~~~~~l~~~d~~~~~~-~~~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g~~------ 324 (741)
T 2ecf_A 253 YPAAGDANVQVKLGVISPAEQAQ-TQWIDLGKEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASNQQ------ 324 (741)
T ss_dssp CCBTTSCCCEEEEEEECSSTTCC-CEEECCCSCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTCCE------
T ss_pred cCCCCCCCCeeEEEEEECCCCCc-eEEecCCCCcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCCce------
Confidence 788899875 33 222222 46788999999 99975444433 356799999987532
Q ss_pred cCCCCCeeeEEEcCCCC----CcceEEeCCCCCcEEEEEeCCCcEEEEecC
Q 014472 359 AEDGPPELLFIHGGHTS----KISDFSWNPCEDWVISSVAEDNILQIWQMA 405 (424)
Q Consensus 359 ~~~~~~~~~~~~~~h~~----~v~~~~~~~~~~~~l~s~~~d~~i~iw~~~ 405 (424)
......+.. .+..++|+|+|+ ++++++.||.++||.+.
T Consensus 325 --------~~~~~~~~~~~~~~~~~~~~spdg~-~~~~~~~~g~~~l~~~~ 366 (741)
T 2ecf_A 325 --------RVLAHETSPTWVPLHNSLRFLDDGS-ILWSSERTGFQHLYRID 366 (741)
T ss_dssp --------EEEEEEECSSCCCCCSCCEECTTSC-EEEEECTTSSCEEEEEC
T ss_pred --------EEEEEcCCCCcCCcCCceEECCCCe-EEEEecCCCccEEEEEc
Confidence 222222221 457899999999 78888999988888775
No 147
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.86 E-value=4.6e-20 Score=185.82 Aligned_cols=244 Identities=9% Similarity=0.056 Sum_probs=167.2
Q ss_pred ceeEEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCC---CeeeEEecCCCCceEEEEeCC---
Q 014472 127 EVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHST---EGYGLSWSKFKEGHLLSGSDD--- 200 (424)
Q Consensus 127 ~v~~i~~~p~~~~~latg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~h~~---~v~~l~~~~~~~~~l~s~~~d--- 200 (424)
.+.+++|+|++. ++++ +.||.|++||..+ ......+..|.. .|.+++|+|+++ +|++++.+
T Consensus 18 ~~~~~~~spdg~-~~~~-~~dg~i~~~d~~~----------g~~~~~~~~~~~~~~~v~~~~~SpDg~-~l~~~~~~~~~ 84 (723)
T 1xfd_A 18 HDPEAKWISDTE-FIYR-EQKGTVRLWNVET----------NTSTVLIEGKKIESLRAIRYEISPDRE-YALFSYNVEPI 84 (723)
T ss_dssp CCCCCCBSSSSC-BCCC-CSSSCEEEBCGGG----------CCCEEEECTTTTTTTTCSEEEECTTSS-EEEEEESCCCC
T ss_pred cccccEEcCCCc-EEEE-eCCCCEEEEECCC----------CcEEEEeccccccccccceEEECCCCC-EEEEEecCccc
Confidence 467899999997 6666 6899999999987 333455555654 499999999998 68887764
Q ss_pred ------CcEEEEeCCCCCCCCcccceeeeecCCcceeeEEeeCCCCcEEEEEeCCCeEEEEECCCCCCCCCeeEecccCC
Q 014472 201 ------AQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQS 274 (424)
Q Consensus 201 ------g~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~ 274 (424)
+.|.+||+.++.. ..+.....|...+..++|+|+|+.+ |.++. +.|++||+.++.. ......+..
T Consensus 85 ~~~~~~~~i~~~d~~~~~~----~~l~~~~~~~~~~~~~~~SPdG~~l-a~~~~-~~i~~~~~~~g~~---~~~~~~~~~ 155 (723)
T 1xfd_A 85 YQHSYTGYYVLSKIPHGDP----QSLDPPEVSNAKLQYAGWGPKGQQL-IFIFE-NNIYYCAHVGKQA---IRVVSTGKE 155 (723)
T ss_dssp SSSCCCSEEEEEESSSCCC----EECCCTTCCSCCCSBCCBCSSTTCE-EEEET-TEEEEESSSSSCC---EEEECCCBT
T ss_pred eeecceeeEEEEECCCCce----EeccCCccccccccccEECCCCCEE-EEEEC-CeEEEEECCCCce---EEEecCCCC
Confidence 7888999987643 1222233455568999999999865 45554 7999999988653 333333333
Q ss_pred C------------------eeEEEecCCCCeEEEEEeCCC----------------------------------cEEEEE
Q 014472 275 E------------------VNCLAFNPFNEWILATGSTDK----------------------------------TVKLFD 302 (424)
Q Consensus 275 ~------------------v~~i~~~~~~~~~l~~g~~dg----------------------------------~i~iwd 302 (424)
. +.+++|+|+|+. |++++.++ .|++||
T Consensus 156 ~~~~~g~~~~v~~ee~~~~~~~~~~SpDg~~-la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d 234 (723)
T 1xfd_A 156 GVIYNGLSDWLYEEEILKTHIAHWWSPDGTR-LAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIG 234 (723)
T ss_dssp TTEEEEECCHHHHHTTSSSSEEEEECTTSSE-EEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEE
T ss_pred CceECcccceeEEEEeccCcceEEECCCCCE-EEEEEECCCccceEEeeccCCcCCCcceeccCCCCCCCCCeeEEEEEE
Confidence 2 378999999985 66655432 799999
Q ss_pred CCCCCCcceeecCC------CCCEEEEEEcCCCCcEEEEEeC----CCeEEEeeCCCCCcccCCCccCCCCCeeeEEEcC
Q 014472 303 LRKISTALHTFDSH------KEEVFQVGWNPKNETILASCCL----GRRLMVWDLSRIDEEQTPEDAEDGPPELLFIHGG 372 (424)
Q Consensus 303 ~~~~~~~~~~~~~~------~~~v~~~~~sp~~~~~l~s~~~----dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 372 (424)
+.+ +.....+..+ ...+.+++|+|+++ +|++.+. +..|.+||+.++.. ..+.. ..
T Consensus 235 ~~~-~~~~~~l~~~~~~~~~~~~~~~~~~SpDg~-~l~~~~~~~~~~~~i~~~d~~~g~~------------~~~~~-~~ 299 (723)
T 1xfd_A 235 LNG-PTHDLEMMPPDDPRMREYYITMVKWATSTK-VAVTWLNRAQNVSILTLCDATTGVC------------TKKHE-DE 299 (723)
T ss_dssp SSS-SCCCEECCCCCCGGGSSEEEEEEEESSSSE-EEEEEEETTSCEEEEEEEETTTCCE------------EEEEE-EE
T ss_pred CCC-CceeEEeeCCccCCCccceeEEEEEeCCCe-EEEEEEcCCCCeEEEEEEeCCCCcc------------eEEEE-ec
Confidence 987 4444555543 56899999999996 5655542 35799999987532 11111 12
Q ss_pred CCCCc----ceEEeCCCCCcEEEE-EeCCC------cEEEEe-cCCCC
Q 014472 373 HTSKI----SDFSWNPCEDWVISS-VAEDN------ILQIWQ-MAENI 408 (424)
Q Consensus 373 h~~~v----~~~~~~~~~~~~l~s-~~~d~------~i~iw~-~~~~~ 408 (424)
+...+ ..++|+|+|+.+++. +..++ .|.+|+ ...+.
T Consensus 300 ~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~l~~~d~~~~~~ 347 (723)
T 1xfd_A 300 SEAWLHRQNEEPVFSKDGRKFFFIRAIPQGGRGKFYHITVSSSQPNSS 347 (723)
T ss_dssp CSSCCCCCCCCCEECTTSCSEEEEEEECCSSSSCEEEEEEECSSCCSS
T ss_pred cCCEEeccCCCceEcCCCCeEEEEEecccCCCcceeEEEEEeccCCCC
Confidence 23333 378999999975554 55677 566777 34433
No 148
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.86 E-value=3.5e-20 Score=181.93 Aligned_cols=233 Identities=10% Similarity=0.051 Sum_probs=168.9
Q ss_pred CCceeEEEecCCCCcEEEEEec-CCeEEEEeCCCCCCCCCCCCCCCCcEEEecCC-CCeeeEEecCCCCceEEEEeC---
Q 014472 125 DGEVNRARYMPQNPFLIATKTV-SAEVYVFDYSKHPSKPPLDGACSPDLRLRGHS-TEGYGLSWSKFKEGHLLSGSD--- 199 (424)
Q Consensus 125 ~~~v~~i~~~p~~~~~latg~~-dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~h~-~~v~~l~~~~~~~~~l~s~~~--- 199 (424)
..+|++++|+|||+ .||+++. +|++.||++.. .....+..|. ..+.+++|+|+ . ++++++.
T Consensus 21 ~~~~~~~~~~~DG~-~la~~s~~~g~~~lw~~~~-----------g~~~~lt~~~~~~~~~~~~spd-~-~l~~~~~~~g 86 (582)
T 3o4h_A 21 AVEKYSLQGVVDGD-KLLVVGFSEGSVNAYLYDG-----------GETVKLNREPINSVLDPHYGVG-R-VILVRDVSKG 86 (582)
T ss_dssp HSCEEEEEEEETTT-EEEEEEEETTEEEEEEEET-----------TEEEECCSSCCSEECEECTTCS-E-EEEEEECSTT
T ss_pred ccchheeecCCCCC-eEEEEEccCCceeEEEEcC-----------CCcEeeecccccccccccCCCC-e-EEEEeccCCC
Confidence 45799999999998 5666665 99999999854 2234455565 58999999997 4 7777765
Q ss_pred CCcEEEEeCCC--CCCCCcccceeeeecCCcceeeEEeeCCCCcEEEEEeCCCeEEEEECCCCCCCCCeeEecccCCCee
Q 014472 200 DAQICLWDINA--APKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVN 277 (424)
Q Consensus 200 dg~i~vwd~~~--~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~ 277 (424)
+....+|.+.. ..... .+. ....+...+|+|+++.++++.+.++.+.+||+.+++. ..+..+.. .
T Consensus 87 ~~~~~l~~~~~~~~g~~~------~l~-~~~~~~~~~~s~dg~~~~~~s~~~~~~~l~d~~~g~~----~~l~~~~~--~ 153 (582)
T 3o4h_A 87 AEQHALFKVNTSRPGEEQ------RLE-AVKPMRILSGVDTGEAVVFTGATEDRVALYALDGGGL----RELARLPG--F 153 (582)
T ss_dssp SCCEEEEEEETTSTTCCE------ECT-TSCSBEEEEEEECSSCEEEEEECSSCEEEEEEETTEE----EEEEEESS--C
T ss_pred CcceEEEEEeccCCCccc------ccc-CCCCceeeeeCCCCCeEEEEecCCCCceEEEccCCcE----EEeecCCC--c
Confidence 55567766544 22111 111 1223446688898876555555555566999987652 23333333 8
Q ss_pred EEEecCCCCeEEEEEeCC----CcEEEEECCCCCCcceeecCCCCCEEEEEEcCCCCcEEEEEeCCC--eEEEeeCCCCC
Q 014472 278 CLAFNPFNEWILATGSTD----KTVKLFDLRKISTALHTFDSHKEEVFQVGWNPKNETILASCCLGR--RLMVWDLSRID 351 (424)
Q Consensus 278 ~i~~~~~~~~~l~~g~~d----g~i~iwd~~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~s~~~dg--~i~iwd~~~~~ 351 (424)
+++|+|+|+. |++++.+ +.|++||+.+ +. ...+..|...+..++|+|+|+ .|+++..++ .|.+||+..+.
T Consensus 154 ~~~~spDG~~-la~~~~~~~~~~~i~~~d~~~-g~-~~~l~~~~~~~~~~~~SpDG~-~l~~~~~~~~~~i~~~d~~~~~ 229 (582)
T 3o4h_A 154 GFVSDIRGDL-IAGLGFFGGGRVSLFTSNLSS-GG-LRVFDSGEGSFSSASISPGMK-VTAGLETAREARLVTVDPRDGS 229 (582)
T ss_dssp EEEEEEETTE-EEEEEEEETTEEEEEEEETTT-CC-CEEECCSSCEEEEEEECTTSC-EEEEEECSSCEEEEEECTTTCC
T ss_pred eEEECCCCCE-EEEEEEcCCCCeEEEEEcCCC-CC-ceEeecCCCccccceECCCCC-EEEEccCCCeeEEEEEcCCCCc
Confidence 9999999995 7766665 7899999986 33 446778888999999999997 577888888 89999998643
Q ss_pred cccCCCccCCCCCeeeEEEcCCCCCcceEE--------eCCCCCcEEEEEeCCCcEEEEec
Q 014472 352 EEQTPEDAEDGPPELLFIHGGHTSKISDFS--------WNPCEDWVISSVAEDNILQIWQM 404 (424)
Q Consensus 352 ~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~--------~~~~~~~~l~s~~~d~~i~iw~~ 404 (424)
.. ...+|...+..++ |+|+|. ++++++.++.+++|++
T Consensus 230 --------------~~-~~~~~~~~~~~~~~~~~~~~~~spdg~-~~~~~~~~g~~~l~~~ 274 (582)
T 3o4h_A 230 --------------VE-DLELPSKDFSSYRPTAITWLGYLPDGR-LAVVARREGRSAVFID 274 (582)
T ss_dssp --------------EE-ECCCSCSHHHHHCCSEEEEEEECTTSC-EEEEEEETTEEEEEET
T ss_pred --------------EE-EccCCCcChhhhhhccccceeEcCCCc-EEEEEEcCCcEEEEEE
Confidence 22 5567777777788 999995 8999999999999999
No 149
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.85 E-value=4.1e-19 Score=162.39 Aligned_cols=238 Identities=10% Similarity=0.008 Sum_probs=164.1
Q ss_pred EEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCC-CCeeeEEecCCCCceEEEEeCCCcEEEEeC
Q 014472 130 RARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHS-TEGYGLSWSKFKEGHLLSGSDDAQICLWDI 208 (424)
Q Consensus 130 ~i~~~p~~~~~latg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~h~-~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~ 208 (424)
.+++++++ .++++++.++.|++||..+ .+....+..+. ..+..++|+|++..+++++..++.|.+||+
T Consensus 4 g~~~~~~~-~~~v~~~~~~~v~~~d~~~----------~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~ 72 (349)
T 1jmx_B 4 GPALKAGH-EYMIVTNYPNNLHVVDVAS----------DTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDL 72 (349)
T ss_dssp CCCCCTTC-EEEEEEETTTEEEEEETTT----------TEEEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEET
T ss_pred cccccCCC-EEEEEeCCCCeEEEEECCC----------CcEEEEEecCCCCCCceeEECCCCCEEEEEeCCCCcEEEEeC
Confidence 45677765 4889999999999999987 33344444332 257899999998755566667899999999
Q ss_pred CCCCCCCcccceeeeec-C-----CcceeeEEeeCCCCcEEEEEeC-----------CCeEEEEECCCCCCCCCeeEecc
Q 014472 209 NAAPKNKSLEAMQIFKV-H-----EGVVEDVAWHLRHEYLFGSVGD-----------DQYLLIWDLRTPSVSKPVQSVVA 271 (424)
Q Consensus 209 ~~~~~~~~~~~~~~~~~-~-----~~~v~~i~~~~~~~~~~~s~~~-----------dg~i~i~d~~~~~~~~~~~~~~~ 271 (424)
.++.. ...+.. + ...+..++|+|+++.++++... ++.|.+||+.+++....+....
T Consensus 73 ~t~~~------~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~- 145 (349)
T 1jmx_B 73 DTCKN------TFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFP- 145 (349)
T ss_dssp TTTEE------EEEEESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEE-
T ss_pred CCCcE------EEEEEcccccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeecc-
Confidence 76632 222221 1 2337899999999876644422 4899999998755333344433
Q ss_pred cCCCeeEEEecCCCCeEEEEEeCCCcEEEEECCCCCCcceeecCCC----------------------------------
Q 014472 272 HQSEVNCLAFNPFNEWILATGSTDKTVKLFDLRKISTALHTFDSHK---------------------------------- 317 (424)
Q Consensus 272 ~~~~v~~i~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~---------------------------------- 317 (424)
+...+.+++|+|++. +++ ++ +.|.+||+.+ ++.+..+..+.
T Consensus 146 ~~~~~~~~~~s~dg~-l~~-~~--~~i~~~d~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (349)
T 1jmx_B 146 MPRQVYLMRAADDGS-LYV-AG--PDIYKMDVKT-GKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFK 220 (349)
T ss_dssp CCSSCCCEEECTTSC-EEE-ES--SSEEEECTTT-CCEEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-
T ss_pred CCCcccceeECCCCc-EEE-cc--CcEEEEeCCC-CceeccccccccCCccccCccceeeecCCCcceeEEeeeeeeecC
Confidence 344689999999998 555 43 3499999987 44444433221
Q ss_pred ----------------------------------CCEEEEEEcC-CCCcEEEEEeCCCeEEEeeCCCCCcccCCCccCCC
Q 014472 318 ----------------------------------EEVFQVGWNP-KNETILASCCLGRRLMVWDLSRIDEEQTPEDAEDG 362 (424)
Q Consensus 318 ----------------------------------~~v~~~~~sp-~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~ 362 (424)
..+..++|+| +++ +++++ ++.|.+||+.++
T Consensus 221 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~dg~-~l~~~--~~~v~~~d~~~~------------ 285 (349)
T 1jmx_B 221 DDKQDPATADLLYGYLSVDLKTGKTHTQEFADLTELYFTGLRSPKDPN-QIYGV--LNRLAKYDLKQR------------ 285 (349)
T ss_dssp ------CCCEEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECSSCTT-EEEEE--ESEEEEEETTTT------------
T ss_pred CCcCCccccccceeEEEEeccCCcEEecccccCCCcceeeEecCCCCC-EEEEE--cCeEEEEECccC------------
Confidence 1455778889 886 45555 889999999874
Q ss_pred CCeeeEEEcCCCCCcceEEeCCCCCcEEEEEeCCCcEEEEecCCCCC
Q 014472 363 PPELLFIHGGHTSKISDFSWNPCEDWVISSVAEDNILQIWQMAENIY 409 (424)
Q Consensus 363 ~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~ 409 (424)
+.+..+.. ...+.+++|+|+++++ ++++.++.|++||+.++..
T Consensus 286 --~~~~~~~~-~~~~~~~~~s~dg~~l-~~~~~~~~v~v~d~~~~~~ 328 (349)
T 1jmx_B 286 --KLIKAANL-DHTYYCVAFDKKGDKL-YLGGTFNDLAVFNPDTLEK 328 (349)
T ss_dssp --EEEEEEEC-SSCCCEEEECSSSSCE-EEESBSSEEEEEETTTTEE
T ss_pred --eEEEEEcC-CCCccceEECCCCCEE-EEecCCCeEEEEeccccce
Confidence 33333332 2347899999999864 4567889999999987643
No 150
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.85 E-value=2.5e-19 Score=180.01 Aligned_cols=253 Identities=12% Similarity=0.136 Sum_probs=174.1
Q ss_pred EEeccCCceeEEEecCCCCcEEEEEecCCeEEEEeCCC-----CCCCCCCCCCCCCcEEEecCC--------------CC
Q 014472 120 QQINHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSK-----HPSKPPLDGACSPDLRLRGHS--------------TE 180 (424)
Q Consensus 120 ~~~~h~~~v~~i~~~p~~~~~latg~~dg~v~iwd~~~-----~~~~~~~~~~~~~~~~~~~h~--------------~~ 180 (424)
....+.+.+..++|+|+++ .||++ .++.|++|++.. ... ......+. ..
T Consensus 115 ~l~~~~~~~~~~~~SpdG~-~la~~-~~~~i~v~~~~~~~~~~g~~----------~~~~~~~~~~~~~g~~~~~ee~~~ 182 (706)
T 2z3z_A 115 YLFDTNEETASLDFSPVGD-RVAYV-RNHNLYIARGGKLGEGMSRA----------IAVTIDGTETLVYGQAVHQREFGI 182 (706)
T ss_dssp EEECCTTCCTTCEECTTSS-EEEEE-ETTEEEEEECBCTTSCCCCC----------EESCSCCBTTEEESSCCGGGCTTC
T ss_pred EccCCcccccCCcCCCCCC-EEEEE-ECCeEEEEecCcccccCCCc----------EEeccCCCCCeEcccchhhhhcCC
Confidence 3456778899999999997 56664 679999999875 211 11111111 22
Q ss_pred eeeEEecCCCCceEEEEe---------------------------------CCCcEEEEeCCCCCCCCcccceeeeecCC
Q 014472 181 GYGLSWSKFKEGHLLSGS---------------------------------DDAQICLWDINAAPKNKSLEAMQIFKVHE 227 (424)
Q Consensus 181 v~~l~~~~~~~~~l~s~~---------------------------------~dg~i~vwd~~~~~~~~~~~~~~~~~~~~ 227 (424)
+.+++|+|++. +|++++ .+..|.+||+.++.. ..+.....|.
T Consensus 183 ~~~~~~SpDg~-~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~----~~~~~~~~~~ 257 (706)
T 2z3z_A 183 EKGTFWSPKGS-CLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGKT----VYLQTGEPKE 257 (706)
T ss_dssp CCSEEECTTSS-EEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTEE----EECCCCSCTT
T ss_pred CceEEECCCCC-EEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCce----EeeccCCCCc
Confidence 58999999998 677776 446799999976532 1111112466
Q ss_pred cceeeEEeeCCCCcEEEEEeCCC-----eEEEEECCCCCCCCCeeEecccC---CCeeEEEecC--CCCeEEEEEeCCCc
Q 014472 228 GVVEDVAWHLRHEYLFGSVGDDQ-----YLLIWDLRTPSVSKPVQSVVAHQ---SEVNCLAFNP--FNEWILATGSTDKT 297 (424)
Q Consensus 228 ~~v~~i~~~~~~~~~~~s~~~dg-----~i~i~d~~~~~~~~~~~~~~~~~---~~v~~i~~~~--~~~~~l~~g~~dg~ 297 (424)
..+.+++|+|+++.++ +++.++ .|++||+.++.....+.. ..+. ..+.+++|+| +++ ++++++.++.
T Consensus 258 ~~~~~~~~spdg~~l~-~~~~~~~~~~~~v~~~d~~~g~~~~~~~~-~~~~~~~~~~~~~~~sp~~dg~-~l~~~~~~g~ 334 (706)
T 2z3z_A 258 KFLTNLSWSPDENILY-VAEVNRAQNECKVNAYDAETGRFVRTLFV-ETDKHYVEPLHPLTFLPGSNNQ-FIWQSRRDGW 334 (706)
T ss_dssp CEEEEEEECTTSSEEE-EEEECTTSCEEEEEEEETTTCCEEEEEEE-EECSSCCCCCSCCEECTTCSSE-EEEEECTTSS
T ss_pred eeEeeEEEECCCCEEE-EEEeCCCCCeeEEEEEECCCCceeeEEEE-ccCCCeECccCCceeecCCCCE-EEEEEccCCc
Confidence 7899999999998654 555554 899999988632111111 1122 2347889999 887 6888999999
Q ss_pred EEEEECCCCCCcceeecCCCCCEEE-EEEcCCCCcEEEEEeCCC----eEEEeeCCCCCcccCCCccCCCCCeeeEEEcC
Q 014472 298 VKLFDLRKISTALHTFDSHKEEVFQ-VGWNPKNETILASCCLGR----RLMVWDLSRIDEEQTPEDAEDGPPELLFIHGG 372 (424)
Q Consensus 298 i~iwd~~~~~~~~~~~~~~~~~v~~-~~~sp~~~~~l~s~~~dg----~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 372 (424)
++||++...+..+..+..+...+.. ++|+|+++.++++++.++ .|..||+..+. ...+ .
T Consensus 335 ~~l~~~~~~~~~~~~l~~~~~~v~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~~~---------------~~~l-~ 398 (706)
T 2z3z_A 335 NHLYLYDTTGRLIRQVTKGEWEVTNFAGFDPKGTRLYFESTEASPLERHFYCIDIKGGK---------------TKDL-T 398 (706)
T ss_dssp CEEEEEETTSCEEEECCCSSSCEEEEEEECTTSSEEEEEESSSCTTCBEEEEEETTCCC---------------CEES-C
T ss_pred cEEEEEECCCCEEEecCCCCeEEEeeeEEcCCCCEEEEEecCCCCceEEEEEEEcCCCC---------------ceec-c
Confidence 9999887435667777777778877 899999986666666665 56666765532 1111 2
Q ss_pred CCCCcceEEeCCCCCcEEEEEeCC---CcEEEEecCCCC
Q 014472 373 HTSKISDFSWNPCEDWVISSVAED---NILQIWQMAENI 408 (424)
Q Consensus 373 h~~~v~~~~~~~~~~~~l~s~~~d---~~i~iw~~~~~~ 408 (424)
|...+.+++|+|++++++++++.+ +.|++|++.++.
T Consensus 399 ~~~~~~~~~~spdg~~l~~~~~~~~~p~~i~l~d~~~~~ 437 (706)
T 2z3z_A 399 PESGMHRTQLSPDGSAIIDIFQSPTVPRKVTVTNIGKGS 437 (706)
T ss_dssp CSSSEEEEEECTTSSEEEEEEECSSCSCEEEEEESSSCE
T ss_pred CCCceEEEEECCCCCEEEEEecCCCCCcEEEEEECCCCe
Confidence 456689999999999655554544 569999998764
No 151
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.84 E-value=2.2e-18 Score=157.72 Aligned_cols=222 Identities=6% Similarity=0.043 Sum_probs=151.5
Q ss_pred EEEEEE-eccCCceeEEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEec---------CCCCeeeEE
Q 014472 116 VQIIQQ-INHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRG---------HSTEGYGLS 185 (424)
Q Consensus 116 ~~~~~~-~~h~~~v~~i~~~p~~~~~latg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~---------h~~~v~~l~ 185 (424)
++.+.. ..+...+..++|+|+++.+++++..++.|.+|++... +.......+.. +...+.+++
T Consensus 75 ~~~~~~~~~~~~~p~~~a~spdg~~l~~~~~~~~~v~v~~~~~~-------g~~~~~~~~~~~~~~p~~~~~~~~~~~~~ 147 (347)
T 3hfq_A 75 AHKLNTVVAPGTPPAYVAVDEARQLVYSANYHKGTAEVMKIAAD-------GALTLTDTVQHSGHGPRPEQDGSHIHYTD 147 (347)
T ss_dssp EEEEEEEEEESCCCSEEEEETTTTEEEEEETTTTEEEEEEECTT-------SCEEEEEEEECCCCCSSTTCSSCCEEEEE
T ss_pred EEEeeeeecCCCCCEEEEECCCCCEEEEEeCCCCEEEEEEeCCC-------CCeeecceeecCCCCCCccccCCCceEEE
Confidence 333333 4577889999999999855554447899999999641 11222222221 123478899
Q ss_pred ecCCCCceEEEEeCCCcEEEEeCCCCCCCCcccceeeeec-CCcceeeEEeeCCCCcEEEEEeCCCeEEEEECCCCCC-C
Q 014472 186 WSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKV-HEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSV-S 263 (424)
Q Consensus 186 ~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~-~~~~v~~i~~~~~~~~~~~s~~~dg~i~i~d~~~~~~-~ 263 (424)
|+|++. ++++...++.|.+|++.... .+.....+.. ....+..++|+|+++.+++++..++.|.+|++..... .
T Consensus 148 ~spdg~-l~v~~~~~~~v~~~~~~~~g---~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~ 223 (347)
T 3hfq_A 148 LTPDNR-LAVIDLGSDKVYVYNVSDAG---QLSEQSVLTMEAGFGPRHLVFSPDGQYAFLAGELSSQIASLKYDTQTGAF 223 (347)
T ss_dssp ECTTSC-EEEEETTTTEEEEEEECTTS---CEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEE
T ss_pred ECCCCc-EEEEeCCCCEEEEEEECCCC---cEEEeeeEEcCCCCCCceEEECCCCCEEEEEeCCCCEEEEEEecCCCCce
Confidence 999998 78887788999999998321 1122222222 2336788999999988887788899999999875211 1
Q ss_pred CCeeEecccC------CCeeEEEecCCCCeEEEEEeCCCcEEEEECCCCC--CcceeecCCCCCEEEEEEcCCCCcEEEE
Q 014472 264 KPVQSVVAHQ------SEVNCLAFNPFNEWILATGSTDKTVKLFDLRKIS--TALHTFDSHKEEVFQVGWNPKNETILAS 335 (424)
Q Consensus 264 ~~~~~~~~~~------~~v~~i~~~~~~~~~l~~g~~dg~i~iwd~~~~~--~~~~~~~~~~~~v~~~~~sp~~~~~l~s 335 (424)
..+..+.... ..+..++|+|+|++++++...++.|.+||+...+ ..+..+..+...+..++|+|+++.++++
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~i~~spdG~~l~v~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~spdg~~l~v~ 303 (347)
T 3hfq_A 224 TQLGIVKTIPADYTAHNGAAAIRLSHDGHFLYVSNRGYNTLAVFAVTADGHLTLIQQISTEGDFPRDFDLDPTEAFVVVV 303 (347)
T ss_dssp EEEEEEESSCTTCCSCCEEEEEEECTTSCEEEEEEETTTEEEEEEECGGGCEEEEEEEECSSSCCCEEEECTTSSEEEEE
T ss_pred EEeeeeeecCCCCCCCCcceeEEECCCCCEEEEEeCCCCEEEEEEECCCCcEEEeEEEecCCCCcCeEEECCCCCEEEEE
Confidence 1122222222 3588999999999766778889999999997422 3455556666778999999999754444
Q ss_pred EeCCCeEEEeeCC
Q 014472 336 CCLGRRLMVWDLS 348 (424)
Q Consensus 336 ~~~dg~i~iwd~~ 348 (424)
+..++.|.+|++.
T Consensus 304 ~~~~~~v~v~~~d 316 (347)
T 3hfq_A 304 NQNTDNATLYARD 316 (347)
T ss_dssp ETTTTEEEEEEEC
T ss_pred EcCCCcEEEEEEe
Confidence 4456899999554
No 152
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.84 E-value=1.8e-19 Score=181.04 Aligned_cols=244 Identities=10% Similarity=0.075 Sum_probs=169.4
Q ss_pred CCceeEEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCCeeeEEecCCCCceEEEEeCCCcEE
Q 014472 125 DGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDDAQIC 204 (424)
Q Consensus 125 ~~~v~~i~~~p~~~~~latg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~ 204 (424)
...|.+++|+|+ ..++++ .++.|++||+.+ .....+..+...+.+++|+|++. .|+++ .++.|+
T Consensus 81 ~~~v~~~~~spd-~~~~~~--~~~~i~~~d~~~-----------~~~~~l~~~~~~~~~~~~SpdG~-~la~~-~~~~i~ 144 (706)
T 2z3z_A 81 AFPSFRTLDAGR-GLVVLF--TQGGLVGFDMLA-----------RKVTYLFDTNEETASLDFSPVGD-RVAYV-RNHNLY 144 (706)
T ss_dssp -CCCEEEEETTT-TEEEEE--ETTEEEEEETTT-----------TEEEEEECCTTCCTTCEECTTSS-EEEEE-ETTEEE
T ss_pred ccCceeEEECCC-CeEEEE--ECCEEEEEECCC-----------CceEEccCCcccccCCcCCCCCC-EEEEE-ECCeEE
Confidence 367999999999 544444 359999999976 22345566778899999999998 57764 679999
Q ss_pred EEeCCC-----CCCCCcccceeeeecCCc--------------ceeeEEeeCCCCcEEEEEe------------------
Q 014472 205 LWDINA-----APKNKSLEAMQIFKVHEG--------------VVEDVAWHLRHEYLFGSVG------------------ 247 (424)
Q Consensus 205 vwd~~~-----~~~~~~~~~~~~~~~~~~--------------~v~~i~~~~~~~~~~~s~~------------------ 247 (424)
+||+.+ +... .....+.. .+.+++|+|+++.++ +++
T Consensus 145 v~~~~~~~~~~g~~~------~~~~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg~~la-~~~~d~~~~~~~~~~~~~~~~ 217 (706)
T 2z3z_A 145 IARGGKLGEGMSRAI------AVTIDGTETLVYGQAVHQREFGIEKGTFWSPKGSCLA-FYRMDQSMVKPTPIVDYHPLE 217 (706)
T ss_dssp EEECBCTTSCCCCCE------ESCSCCBTTEEESSCCGGGCTTCCCSEEECTTSSEEE-EEEEECTTSCCEEEEECCSSS
T ss_pred EEecCcccccCCCcE------EeccCCCCCeEcccchhhhhcCCCceEEECCCCCEEE-EEEECCCCCceEEeeccCCCC
Confidence 999987 5321 11111222 258999999998665 554
Q ss_pred ---------------CCCeEEEEECCCCCCCCCeeEecccCCCeeEEEecCCCCeEEEEEeCCC-----cEEEEECCCCC
Q 014472 248 ---------------DDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATGSTDK-----TVKLFDLRKIS 307 (424)
Q Consensus 248 ---------------~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~l~~g~~dg-----~i~iwd~~~~~ 307 (424)
.+..|++||+.++... .+.....|...+.+++|+|+++. |++++.++ .|.+||+.+ +
T Consensus 218 ~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~~-~~~~~~~~~~~~~~~~~spdg~~-l~~~~~~~~~~~~~v~~~d~~~-g 294 (706)
T 2z3z_A 218 AESKPLYYPMAGTPSHHVTVGIYHLATGKTV-YLQTGEPKEKFLTNLSWSPDENI-LYVAEVNRAQNECKVNAYDAET-G 294 (706)
T ss_dssp CEEEEECCCBTTSCCCEEEEEEEETTTTEEE-ECCCCSCTTCEEEEEEECTTSSE-EEEEEECTTSCEEEEEEEETTT-C
T ss_pred CceEEeeCCCCCCCCCeeEEEEEECCCCceE-eeccCCCCceeEeeEEEECCCCE-EEEEEeCCCCCeeEEEEEECCC-C
Confidence 4467999999876521 11111246678999999999985 66666554 899999987 4
Q ss_pred Ccceeec--CCCC---CEEEEEEcC--CCCcEEEEEeCCCeEEEeeCCCCCcccCCCccCCCCCeeeEEEcCCCCCcce-
Q 014472 308 TALHTFD--SHKE---EVFQVGWNP--KNETILASCCLGRRLMVWDLSRIDEEQTPEDAEDGPPELLFIHGGHTSKISD- 379 (424)
Q Consensus 308 ~~~~~~~--~~~~---~v~~~~~sp--~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~- 379 (424)
.....+. .+.. .+..++|+| +++ +|++++.|+.++||.+.... ..+..+..|...+..
T Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~sp~~dg~-~l~~~~~~g~~~l~~~~~~~-------------~~~~~l~~~~~~v~~~ 360 (706)
T 2z3z_A 295 RFVRTLFVETDKHYVEPLHPLTFLPGSNNQ-FIWQSRRDGWNHLYLYDTTG-------------RLIRQVTKGEWEVTNF 360 (706)
T ss_dssp CEEEEEEEEECSSCCCCCSCCEECTTCSSE-EEEEECTTSSCEEEEEETTS-------------CEEEECCCSSSCEEEE
T ss_pred ceeeEEEEccCCCeECccCCceeecCCCCE-EEEEEccCCccEEEEEECCC-------------CEEEecCCCCeEEEee
Confidence 2222222 2222 346789999 986 78889999999999876211 334455667667776
Q ss_pred EEeCCCCCcEEEEEeCCC----cEEEEecCCCC
Q 014472 380 FSWNPCEDWVISSVAEDN----ILQIWQMAENI 408 (424)
Q Consensus 380 ~~~~~~~~~~l~s~~~d~----~i~iw~~~~~~ 408 (424)
++|+|+++.++++++.++ .|..|++.++.
T Consensus 361 ~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~~~ 393 (706)
T 2z3z_A 361 AGFDPKGTRLYFESTEASPLERHFYCIDIKGGK 393 (706)
T ss_dssp EEECTTSSEEEEEESSSCTTCBEEEEEETTCCC
T ss_pred eEEcCCCCEEEEEecCCCCceEEEEEEEcCCCC
Confidence 799999997666766665 67777776654
No 153
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.83 E-value=4.1e-19 Score=178.84 Aligned_cols=246 Identities=7% Similarity=0.016 Sum_probs=158.3
Q ss_pred ceeEEEecCCCCcEEEEEecC---------CeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCCeeeEEecCCCCceEEEE
Q 014472 127 EVNRARYMPQNPFLIATKTVS---------AEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSG 197 (424)
Q Consensus 127 ~v~~i~~~p~~~~~latg~~d---------g~v~iwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~ 197 (424)
.|.+++|+|+++ .||+++.+ +.|++||+.+ +....+....+|...+..++|+|+|+ .|+.+
T Consensus 62 ~v~~~~~SpDg~-~l~~~~~~~~~~~~~~~~~i~~~d~~~--------~~~~~l~~~~~~~~~~~~~~~SPdG~-~la~~ 131 (723)
T 1xfd_A 62 RAIRYEISPDRE-YALFSYNVEPIYQHSYTGYYVLSKIPH--------GDPQSLDPPEVSNAKLQYAGWGPKGQ-QLIFI 131 (723)
T ss_dssp TCSEEEECTTSS-EEEEEESCCCCSSSCCCSEEEEEESSS--------CCCEECCCTTCCSCCCSBCCBCSSTT-CEEEE
T ss_pred ccceEEECCCCC-EEEEEecCccceeecceeeEEEEECCC--------CceEeccCCccccccccccEECCCCC-EEEEE
Confidence 489999999997 67776653 7899999987 21111111224555688999999998 57777
Q ss_pred eCCCcEEEEeCCCCCCCCcccceeeeecCCc------------------ceeeEEeeCCCCcEEEEEeCCC---------
Q 014472 198 SDDAQICLWDINAAPKNKSLEAMQIFKVHEG------------------VVEDVAWHLRHEYLFGSVGDDQ--------- 250 (424)
Q Consensus 198 ~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~------------------~v~~i~~~~~~~~~~~s~~~dg--------- 250 (424)
+. +.|++||+.++.. ......+.. .+.+++|+|+++.++ +++.++
T Consensus 132 ~~-~~i~~~~~~~g~~------~~~~~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~SpDg~~la-~~~~~~~~~~~~~~~ 203 (723)
T 1xfd_A 132 FE-NNIYYCAHVGKQA------IRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLA-YAAINDSRVPIMELP 203 (723)
T ss_dssp ET-TEEEEESSSSSCC------EEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTSSEEE-EEEEECTTSCEEEEC
T ss_pred EC-CeEEEEECCCCce------EEEecCCCCCceECcccceeEEEEeccCcceEEECCCCCEEE-EEEECCCccceEEee
Confidence 75 7999999987643 111222222 237899999998665 554332
Q ss_pred -------------------------eEEEEECCCCCCCCCeeEecc------cCCCeeEEEecCCCCeEEEEEeC----C
Q 014472 251 -------------------------YLLIWDLRTPSVSKPVQSVVA------HQSEVNCLAFNPFNEWILATGST----D 295 (424)
Q Consensus 251 -------------------------~i~i~d~~~~~~~~~~~~~~~------~~~~v~~i~~~~~~~~~l~~g~~----d 295 (424)
.|++||+.++.. ...+.. +...+.+++|+|+|+ +|++... +
T Consensus 204 ~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~~~---~~~l~~~~~~~~~~~~~~~~~~SpDg~-~l~~~~~~~~~~ 279 (723)
T 1xfd_A 204 TYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGPTH---DLEMMPPDDPRMREYYITMVKWATSTK-VAVTWLNRAQNV 279 (723)
T ss_dssp CCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSSCC---CEECCCCCCGGGSSEEEEEEEESSSSE-EEEEEEETTSCE
T ss_pred ccCCcCCCcceeccCCCCCCCCCeeEEEEEECCCCce---eEEeeCCccCCCccceeEEEEEeCCCe-EEEEEEcCCCCe
Confidence 799999987653 233333 256789999999998 4555432 3
Q ss_pred CcEEEEECCCCCCcceeecC-CCCCE----EEEEEcCCCCcEEEE-EeCCC------eEEEeeCCCCCcccCCCccCCCC
Q 014472 296 KTVKLFDLRKISTALHTFDS-HKEEV----FQVGWNPKNETILAS-CCLGR------RLMVWDLSRIDEEQTPEDAEDGP 363 (424)
Q Consensus 296 g~i~iwd~~~~~~~~~~~~~-~~~~v----~~~~~sp~~~~~l~s-~~~dg------~i~iwd~~~~~~~~~~~~~~~~~ 363 (424)
..|++||+.+ ++....+.. +...+ ..++|+|+|+.++++ +..++ .|.+||+......
T Consensus 280 ~~i~~~d~~~-g~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~l~~~d~~~~~~~---------- 348 (723)
T 1xfd_A 280 SILTLCDATT-GVCTKKHEDESEAWLHRQNEEPVFSKDGRKFFFIRAIPQGGRGKFYHITVSSSQPNSSN---------- 348 (723)
T ss_dssp EEEEEEETTT-CCEEEEEEEECSSCCCCCCCCCEECTTSCSEEEEEEECCSSSSCEEEEEEECSSCCSSS----------
T ss_pred EEEEEEeCCC-CcceEEEEeccCCEEeccCCCceEcCCCCeEEEEEecccCCCcceeEEEEEeccCCCCc----------
Confidence 5799999987 454444432 33444 378999999876655 56677 4666663222110
Q ss_pred CeeeEEEcCCCCCcce-EEeCCCCCcEEEEEeCC--CcEEEEecCC
Q 014472 364 PELLFIHGGHTSKISD-FSWNPCEDWVISSVAED--NILQIWQMAE 406 (424)
Q Consensus 364 ~~~~~~~~~h~~~v~~-~~~~~~~~~~l~s~~~d--~~i~iw~~~~ 406 (424)
.....+..+...+.. ++|+|+++.+++++..+ +.++||++..
T Consensus 349 -~~~~~l~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~~~ 393 (723)
T 1xfd_A 349 -DNIQSITSGDWDVTKILAYDEKGNKIYFLSTEDLPRRRQLYSANT 393 (723)
T ss_dssp -CCCCBSCCSSSCEEEEEEEETTTTEEEEEESSSCTTCCEEEEECS
T ss_pred -cceeEeecCCeEEEeeeEEcCCCCEEEEEEcCCCCcceEEEEEeC
Confidence 001111222223444 69999999655555555 8899999864
No 154
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.82 E-value=1.7e-18 Score=181.12 Aligned_cols=234 Identities=9% Similarity=0.027 Sum_probs=178.0
Q ss_pred CceeEEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEec-----------CCCCeeeEEec-CCCCce
Q 014472 126 GEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRG-----------HSTEGYGLSWS-KFKEGH 193 (424)
Q Consensus 126 ~~v~~i~~~p~~~~~latg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~-----------h~~~v~~l~~~-~~~~~~ 193 (424)
..+..++|+|++. .||.+ .++.|++|++.. ..+..+.+ |...+.+++|+ |++. .
T Consensus 245 ~~~~~~~~SpDG~-~la~~-~~~~i~~~d~~~-----------~~l~~l~~~~~~~~~~~~~~~~~v~~~~~S~pdG~-~ 310 (1045)
T 1k32_A 245 TDYYPRHLNTDGR-RILFS-KGGSIYIFNPDT-----------EKIEKIEIGDLESPEDRIISIPSKFAEDFSPLDGD-L 310 (1045)
T ss_dssp CSSCEEEEEESSS-CEEEE-ETTEEEEECTTT-----------CCEEECCCCCCCBCCSEEEECGGGGEEEEEECGGG-C
T ss_pred CCcceeeEcCCCC-EEEEE-eCCEEEEecCCc-----------eEeeeeccCcccccccccccccccceeeecCCCCC-E
Confidence 3567889999997 56665 489999999843 11122222 45578999999 9988 5
Q ss_pred EEEEeCCCcEEEEeCCCCCCCCcccceeeeecCCc-ceeeEEeeCCCCcEEEEEeCCCeEE-EEECCCCCCCCCeeEecc
Q 014472 194 LLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEG-VVEDVAWHLRHEYLFGSVGDDQYLL-IWDLRTPSVSKPVQSVVA 271 (424)
Q Consensus 194 l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~-~v~~i~~~~~~~~~~~s~~~dg~i~-i~d~~~~~~~~~~~~~~~ 271 (424)
|++++ ++.|.+|++..+. ...+..|.. .+..++|+ +++.+ +.++.++.+. +||+..+. ...+..
T Consensus 311 la~~~-~~~i~~~~~~~~~-------~~~~~~~~~~~~~~~~~s-dg~~l-~~~s~~~~l~~~~d~~~~~----~~~l~~ 376 (1045)
T 1k32_A 311 IAFVS-RGQAFIQDVSGTY-------VLKVPEPLRIRYVRRGGD-TKVAF-IHGTREGDFLGIYDYRTGK----AEKFEE 376 (1045)
T ss_dssp EEEEE-TTEEEEECTTSSB-------EEECSCCSCEEEEEECSS-SEEEE-EEEETTEEEEEEEETTTCC----EEECCC
T ss_pred EEEEE-cCEEEEEcCCCCc-------eEEccCCCcceEEeeeEc-CCCeE-EEEECCCceEEEEECCCCC----ceEecC
Confidence 77766 7899999987652 223445666 89999999 87654 5677788888 99988754 334446
Q ss_pred cCCCeeEEEecCCCCeEEEEEeCCCcEEEEECCCCCCcceeecCCCCCEEEEEEcCCCCcEEEEEeCC----------Ce
Q 014472 272 HQSEVNCLAFNPFNEWILATGSTDKTVKLFDLRKISTALHTFDSHKEEVFQVGWNPKNETILASCCLG----------RR 341 (424)
Q Consensus 272 ~~~~v~~i~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~s~~~d----------g~ 341 (424)
|...+..++|+|+++ .|++++.++.|++||+.+ +........|...+.+++|+|+++ +|++++.+ +.
T Consensus 377 ~~~~~~~~~~SpDG~-~la~~~~~~~v~~~d~~t-g~~~~~~~~~~~~v~~~~~SpDG~-~la~~~~~~~~~~~~~~~~~ 453 (1045)
T 1k32_A 377 NLGNVFAMGVDRNGK-FAVVANDRFEIMTVDLET-GKPTVIERSREAMITDFTISDNSR-FIAYGFPLKHGETDGYVMQA 453 (1045)
T ss_dssp CCCSEEEEEECTTSS-EEEEEETTSEEEEEETTT-CCEEEEEECSSSCCCCEEECTTSC-EEEEEEEECSSTTCSCCEEE
T ss_pred CccceeeeEECCCCC-EEEEECCCCeEEEEECCC-CceEEeccCCCCCccceEECCCCC-eEEEEecCccccccCCCCCe
Confidence 778899999999998 588899999999999987 566666667889999999999997 45555543 48
Q ss_pred EEEeeCCCCCcccCCCccCCCCCeeeEEEcCCCCCcceEEeCCCCCcEEEEEeCCCcEEEEecCC
Q 014472 342 LMVWDLSRIDEEQTPEDAEDGPPELLFIHGGHTSKISDFSWNPCEDWVISSVAEDNILQIWQMAE 406 (424)
Q Consensus 342 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iw~~~~ 406 (424)
|++||+..+ + ...+..|...+..++|+|+|+ .|++++.++...+|+...
T Consensus 454 i~l~d~~~g--------------~-~~~l~~~~~~~~~~~~spdG~-~l~~~s~~~~~~~~~~~~ 502 (1045)
T 1k32_A 454 IHVYDMEGR--------------K-IFAATTENSHDYAPAFDADSK-NLYYLSYRSLDPSPDRVV 502 (1045)
T ss_dssp EEEEETTTT--------------E-EEECSCSSSBEEEEEECTTSC-EEEEEESCCCCCEECSSS
T ss_pred EEEEECCCC--------------c-EEEeeCCCcccCCceEcCCCC-EEEEEecccCCcCcchhc
Confidence 999999863 2 455667777888999999999 577778888888887653
No 155
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.82 E-value=3.3e-18 Score=178.87 Aligned_cols=246 Identities=11% Similarity=0.102 Sum_probs=180.7
Q ss_pred eccCCceeEEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCCeeeEEecCCCCceEEEEeCCC
Q 014472 122 INHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDDA 201 (424)
Q Consensus 122 ~~h~~~v~~i~~~p~~~~~latg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg 201 (424)
..|.+.+.++.|+++ .++++++.+|.+.||.+... ......+..|. .+..++|+|++. .|+.+ .++
T Consensus 200 ~~~~~~v~~~~~s~d--~l~~~~~~dg~~~l~~~~~~---------g~~~~~l~~~~-~~~~~~~SpDG~-~la~~-~~~ 265 (1045)
T 1k32_A 200 VDMSTHVSSPVIVGH--RIYFITDIDGFGQIYSTDLD---------GKDLRKHTSFT-DYYPRHLNTDGR-RILFS-KGG 265 (1045)
T ss_dssp ECCSSCCEEEEEETT--EEEEEECTTSSCEEEEEETT---------SCSCEECCCCC-SSCEEEEEESSS-CEEEE-ETT
T ss_pred cCCCCcccceEEeCC--EEEEEEeccCceEEEEEeCC---------CCcceEecCCC-CcceeeEcCCCC-EEEEE-eCC
Confidence 679999999999987 47788888899999987641 12234455554 467789999998 57666 489
Q ss_pred cEEEEeCCCCCCCCcccc-----eeeeecCCcceeeEEee-CCCCcEEEEEeCCCeEEEEECCCCCCCCCeeEecccCC-
Q 014472 202 QICLWDINAAPKNKSLEA-----MQIFKVHEGVVEDVAWH-LRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQS- 274 (424)
Q Consensus 202 ~i~vwd~~~~~~~~~~~~-----~~~~~~~~~~v~~i~~~-~~~~~~~~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~- 274 (424)
.|.+|++..... ..+.. ......|...+.+++|+ |+++.++ +++ ++.|.+|++..+. ...+..|..
T Consensus 266 ~i~~~d~~~~~l-~~l~~~~~~~~~~~~~~~~~v~~~~~S~pdG~~la-~~~-~~~i~~~~~~~~~----~~~~~~~~~~ 338 (1045)
T 1k32_A 266 SIYIFNPDTEKI-EKIEIGDLESPEDRIISIPSKFAEDFSPLDGDLIA-FVS-RGQAFIQDVSGTY----VLKVPEPLRI 338 (1045)
T ss_dssp EEEEECTTTCCE-EECCCCCCCBCCSEEEECGGGGEEEEEECGGGCEE-EEE-TTEEEEECTTSSB----EEECSCCSCE
T ss_pred EEEEecCCceEe-eeeccCcccccccccccccccceeeecCCCCCEEE-EEE-cCEEEEEcCCCCc----eEEccCCCcc
Confidence 999999833211 00000 00011245579999999 9998664 554 8899999998654 334556667
Q ss_pred CeeEEEecCCCCeEEEEEeCCCcEE-EEECCCCCCcceeecCCCCCEEEEEEcCCCCcEEEEEeCCCeEEEeeCCCCCcc
Q 014472 275 EVNCLAFNPFNEWILATGSTDKTVK-LFDLRKISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEE 353 (424)
Q Consensus 275 ~v~~i~~~~~~~~~l~~g~~dg~i~-iwd~~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~s~~~dg~i~iwd~~~~~~~ 353 (424)
.+..++|+ +++. |+.++.++.+. +||+.. +. ...+..|...+..++|+|+++ .|++++.++.|++||+.++
T Consensus 339 ~~~~~~~s-dg~~-l~~~s~~~~l~~~~d~~~-~~-~~~l~~~~~~~~~~~~SpDG~-~la~~~~~~~v~~~d~~tg--- 410 (1045)
T 1k32_A 339 RYVRRGGD-TKVA-FIHGTREGDFLGIYDYRT-GK-AEKFEENLGNVFAMGVDRNGK-FAVVANDRFEIMTVDLETG--- 410 (1045)
T ss_dssp EEEEECSS-SEEE-EEEEETTEEEEEEEETTT-CC-EEECCCCCCSEEEEEECTTSS-EEEEEETTSEEEEEETTTC---
T ss_pred eEEeeeEc-CCCe-EEEEECCCceEEEEECCC-CC-ceEecCCccceeeeEECCCCC-EEEEECCCCeEEEEECCCC---
Confidence 89999999 8874 77777788888 899876 33 344447788999999999996 6889999999999999875
Q ss_pred cCCCccCCCCCeeeEEEcCCCCCcceEEeCCCCCcEEEEEeCC----------CcEEEEecCCCC
Q 014472 354 QTPEDAEDGPPELLFIHGGHTSKISDFSWNPCEDWVISSVAED----------NILQIWQMAENI 408 (424)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d----------~~i~iw~~~~~~ 408 (424)
++.....+|...+.+++|+|+|++ |++++.+ +.|++|++.++.
T Consensus 411 -----------~~~~~~~~~~~~v~~~~~SpDG~~-la~~~~~~~~~~~~~~~~~i~l~d~~~g~ 463 (1045)
T 1k32_A 411 -----------KPTVIERSREAMITDFTISDNSRF-IAYGFPLKHGETDGYVMQAIHVYDMEGRK 463 (1045)
T ss_dssp -----------CEEEEEECSSSCCCCEEECTTSCE-EEEEEEECSSTTCSCCEEEEEEEETTTTE
T ss_pred -----------ceEEeccCCCCCccceEECCCCCe-EEEEecCccccccCCCCCeEEEEECCCCc
Confidence 334444578888999999999995 5555543 489999998764
No 156
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.81 E-value=2.3e-17 Score=151.81 Aligned_cols=241 Identities=10% Similarity=0.111 Sum_probs=158.6
Q ss_pred EEEEEe----cCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCCeeeEEecCCCCceEEEEeCC----CcEEEEeCCCC
Q 014472 140 LIATKT----VSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDD----AQICLWDINAA 211 (424)
Q Consensus 140 ~latg~----~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~d----g~i~vwd~~~~ 211 (424)
++.+|+ .++.|++|.+.... +........ +...+..++|+|++. +|++++.+ +.|.+|++...
T Consensus 15 ~~~vg~y~~~~~~~i~~~~~d~~~------g~~~~~~~~--~~~~p~~l~~spdg~-~l~~~~~~~~~~~~v~~~~~~~~ 85 (361)
T 3scy_A 15 TMLVGTYTSGNSKGIYTFRFNEET------GESLPLSDA--EVANPSYLIPSADGK-FVYSVNEFSKDQAAVSAFAFDKE 85 (361)
T ss_dssp EEEEEECCSSSCCEEEEEEEETTT------CCEEEEEEE--ECSCCCSEEECTTSS-EEEEEECCSSTTCEEEEEEEETT
T ss_pred EEEEEeccCCCCCCEEEEEEeCCC------CCEEEeecc--cCCCCceEEECCCCC-EEEEEEccCCCCCcEEEEEEeCC
Confidence 455554 35689999886411 112222223 677788999999987 67777775 79999998653
Q ss_pred CCCCcccceeeeecCCcceeeEEeeCCCCcEEEEEeCCCeEEEEECCCCCCCCCeeEecc-----------cCCCeeEEE
Q 014472 212 PKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVA-----------HQSEVNCLA 280 (424)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~~s~~~dg~i~i~d~~~~~~~~~~~~~~~-----------~~~~v~~i~ 280 (424)
. ..+..+.....+...+..+++ +++.++++...++.|.+|++........+..... +...+.+++
T Consensus 86 ~--g~~~~~~~~~~~~~~p~~~~~--dg~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 161 (361)
T 3scy_A 86 K--GTLHLLNTQKTMGADPCYLTT--NGKNIVTANYSGGSITVFPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVR 161 (361)
T ss_dssp T--TEEEEEEEEECSSSCEEEEEE--CSSEEEEEETTTTEEEEEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEE
T ss_pred C--CcEEEeeEeccCCCCcEEEEE--CCCEEEEEECCCCEEEEEEeCCCCcCcccceeEEccCCCCCccccCCCcceEEE
Confidence 1 122233334445556777777 6777776666789999999976443222221111 123458899
Q ss_pred ecCCCCeEEEEEeCCCcEEEEECCCCCC------c------ceeecCCCCCEEEEEEcCCCCcEEEEEeCCCeEEEeeCC
Q 014472 281 FNPFNEWILATGSTDKTVKLFDLRKIST------A------LHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLS 348 (424)
Q Consensus 281 ~~~~~~~~l~~g~~dg~i~iwd~~~~~~------~------~~~~~~~~~~v~~~~~sp~~~~~l~s~~~dg~i~iwd~~ 348 (424)
|+|+++++++++..++.|.+|++..... . ......+...+..++|+|+++.+++++..++.|.+|++.
T Consensus 162 ~spdg~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~ 241 (361)
T 3scy_A 162 ITPDGKYLLADDLGTDQIHKFNINPNANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKFAYLINEIGGTVIAFRYA 241 (361)
T ss_dssp ECTTSSEEEEEETTTTEEEEEEECTTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTCEEEEEEEE
T ss_pred ECCCCCEEEEEeCCCCEEEEEEEcCCCCcccccceeecccccceecCCCCCCeEEEEcCCCCEEEEEcCCCCeEEEEEec
Confidence 9999997677766789999999886332 1 111223456788999999997544555478999999997
Q ss_pred CCCcccCCCccCCCCCeeeEE---EcCCCCCcceEEeCCCCCcEEEEEeC-CCcEEEEecC
Q 014472 349 RIDEEQTPEDAEDGPPELLFI---HGGHTSKISDFSWNPCEDWVISSVAE-DNILQIWQMA 405 (424)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~~~---~~~h~~~v~~~~~~~~~~~~l~s~~~-d~~i~iw~~~ 405 (424)
.+.. ..+.. ...+...+..++|+|+|++++++... ++.|.+|++.
T Consensus 242 ~g~~------------~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~ 290 (361)
T 3scy_A 242 DGML------------DEIQTVAADTVNAQGSGDIHLSPDGKYLYASNRLKADGVAIFKVD 290 (361)
T ss_dssp TTEE------------EEEEEEESCSSCCCCEEEEEECTTSSEEEEEECSSSCEEEEEEEC
T ss_pred CCce------------EEeEEEecCCCCCCCcccEEECCCCCEEEEECCCCCCEEEEEEEc
Confidence 5321 11222 22333456799999999965565555 6899999996
No 157
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.81 E-value=1.1e-17 Score=164.20 Aligned_cols=274 Identities=11% Similarity=0.091 Sum_probs=183.9
Q ss_pred CCCccEEEEccCCCCCCCCCCceEEEEEeecCCCCCCCeEEEEEEEcCCCCCCcccCCCCCcCCCCCCCCCCCCcEEEEE
Q 014472 41 EWPSLTVEWLPDREEPPGKDYSVQKMILGTHTSENEPNYLMLAQVQLPLDDSENDARHYDDDRSDFGGFGCANGKVQIIQ 120 (424)
Q Consensus 41 ~~p~~~~~~~p~~~~~~~~~~~~~~~~~gt~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 120 (424)
..|..++.|.|++ .++++++.. +..+.++.+. .+. ..+
T Consensus 21 ~~~~~~~~~~~DG----------~~la~~s~~----~g~~~lw~~~--------------------------~g~--~~~ 58 (582)
T 3o4h_A 21 AVEKYSLQGVVDG----------DKLLVVGFS----EGSVNAYLYD--------------------------GGE--TVK 58 (582)
T ss_dssp HSCEEEEEEEETT----------TEEEEEEEE----TTEEEEEEEE--------------------------TTE--EEE
T ss_pred ccchheeecCCCC----------CeEEEEEcc----CCceeEEEEc--------------------------CCC--cEe
Confidence 4578999999997 456665532 2346666642 011 122
Q ss_pred EeccC-CceeEEEecCCCCcEEEEEec---CCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCCeeeEEecCCCCceEEE
Q 014472 121 QINHD-GEVNRARYMPQNPFLIATKTV---SAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLS 196 (424)
Q Consensus 121 ~~~h~-~~v~~i~~~p~~~~~latg~~---dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s 196 (424)
...|. ..+..++|+|+ .++++++. +....||.+..... .. ...+..+ ..+...+|+|++...+++
T Consensus 59 lt~~~~~~~~~~~~spd--~~l~~~~~~~g~~~~~l~~~~~~~~-------g~-~~~l~~~-~~~~~~~~s~dg~~~~~~ 127 (582)
T 3o4h_A 59 LNREPINSVLDPHYGVG--RVILVRDVSKGAEQHALFKVNTSRP-------GE-EQRLEAV-KPMRILSGVDTGEAVVFT 127 (582)
T ss_dssp CCSSCCSEECEECTTCS--EEEEEEECSTTSCCEEEEEEETTST-------TC-CEECTTS-CSBEEEEEEECSSCEEEE
T ss_pred eecccccccccccCCCC--eEEEEeccCCCCcceEEEEEeccCC-------Cc-cccccCC-CCceeeeeCCCCCeEEEE
Confidence 23455 58999999998 47777664 45556655433000 01 1123222 234467899988765555
Q ss_pred EeCCCcEEEEeCCCCCCCCcccceeeeecCCcceeeEEeeCCCCcEEEEEeCC----CeEEEEECCCCCCCCCeeEeccc
Q 014472 197 GSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDD----QYLLIWDLRTPSVSKPVQSVVAH 272 (424)
Q Consensus 197 ~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~~s~~~d----g~i~i~d~~~~~~~~~~~~~~~~ 272 (424)
++.++.+.+||+.++.. ..+..+.. .+++|+|+|+.+ ++++.+ +.|++||+.+++. ..+..|
T Consensus 128 s~~~~~~~l~d~~~g~~-------~~l~~~~~--~~~~~spDG~~l-a~~~~~~~~~~~i~~~d~~~g~~----~~l~~~ 193 (582)
T 3o4h_A 128 GATEDRVALYALDGGGL-------RELARLPG--FGFVSDIRGDLI-AGLGFFGGGRVSLFTSNLSSGGL----RVFDSG 193 (582)
T ss_dssp EECSSCEEEEEEETTEE-------EEEEEESS--CEEEEEEETTEE-EEEEEEETTEEEEEEEETTTCCC----EEECCS
T ss_pred ecCCCCceEEEccCCcE-------EEeecCCC--ceEEECCCCCEE-EEEEEcCCCCeEEEEEcCCCCCc----eEeecC
Confidence 55556666999976521 12222333 889999999855 455555 7899999988663 456678
Q ss_pred CCCeeEEEecCCCCeEEEEEeCCC--cEEEEECCCCCCcceeecCCCCCEEEEE--------EcCCCCcEEEEEeCCCeE
Q 014472 273 QSEVNCLAFNPFNEWILATGSTDK--TVKLFDLRKISTALHTFDSHKEEVFQVG--------WNPKNETILASCCLGRRL 342 (424)
Q Consensus 273 ~~~v~~i~~~~~~~~~l~~g~~dg--~i~iwd~~~~~~~~~~~~~~~~~v~~~~--------~sp~~~~~l~s~~~dg~i 342 (424)
...+..++|+|+|+. |+++..++ .|++||+.+ +... .+..|...+..++ |+|+| .++++++.|+.+
T Consensus 194 ~~~~~~~~~SpDG~~-l~~~~~~~~~~i~~~d~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~spdg-~~~~~~~~~g~~ 269 (582)
T 3o4h_A 194 EGSFSSASISPGMKV-TAGLETAREARLVTVDPRD-GSVE-DLELPSKDFSSYRPTAITWLGYLPDG-RLAVVARREGRS 269 (582)
T ss_dssp SCEEEEEEECTTSCE-EEEEECSSCEEEEEECTTT-CCEE-ECCCSCSHHHHHCCSEEEEEEECTTS-CEEEEEEETTEE
T ss_pred CCccccceECCCCCE-EEEccCCCeeEEEEEcCCC-CcEE-EccCCCcChhhhhhccccceeEcCCC-cEEEEEEcCCcE
Confidence 888999999999985 66888888 899999987 4554 6677777777777 99999 689999999999
Q ss_pred EEeeCCCCCcccCCCccCCCCCeeeEEEcCCCCCcceEEeCCCCCcEEEEEeCCC---cEEEEecCC
Q 014472 343 MVWDLSRIDEEQTPEDAEDGPPELLFIHGGHTSKISDFSWNPCEDWVISSVAEDN---ILQIWQMAE 406 (424)
Q Consensus 343 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~---~i~iw~~~~ 406 (424)
+||++ +. ... .+...|.+++|+ +++ ++++++.+. .+.+|+..+
T Consensus 270 ~l~~~--g~--------------~~~---~~~~~v~~~~~s-dg~-~l~~~s~~~~p~~l~~~d~~~ 315 (582)
T 3o4h_A 270 AVFID--GE--------------RVE---APQGNHGRVVLW-RGK-LVTSHTSLSTPPRIVSLPSGE 315 (582)
T ss_dssp EEEET--TE--------------EEC---CCSSEEEEEEEE-TTE-EEEEEEETTEEEEEEEETTCC
T ss_pred EEEEE--CC--------------eec---cCCCceEEEEec-CCE-EEEEEcCCCCCCeEEEEcCCC
Confidence 99999 32 111 223467899999 888 567766664 366666553
No 158
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.79 E-value=1.3e-17 Score=151.62 Aligned_cols=229 Identities=11% Similarity=0.000 Sum_probs=158.1
Q ss_pred cEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCC-C-CeeeEEecCCCCceEEEEeCCCcEEEEeCCCCCCCCc
Q 014472 139 FLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHS-T-EGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKS 216 (424)
Q Consensus 139 ~~latg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~h~-~-~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~ 216 (424)
.++++++.++.|.+||..+ .+....+.... . .+.+++|+|++..++++++.++.|.+||+.++..
T Consensus 2 ~~~v~~~~~~~v~~~d~~~----------~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~--- 68 (337)
T 1pby_B 2 DYILAPARPDKLVVIDTEK----------MAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGET--- 68 (337)
T ss_dssp EEEEEEETTTEEEEEETTT----------TEEEEEEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCCE---
T ss_pred cEEEEcCCCCeEEEEECCC----------CcEEEEEEcCCCCCCccceEEcCCCCEEEEEeCCCCeEEEEECCCCCe---
Confidence 3788899999999999876 33344444222 1 5889999999875566777789999999987632
Q ss_pred ccceeeeec-----CCcceeeEEeeCCCCcEEEEEe-----------CCCeEEEEECCCCCCCCCeeEecccCCCeeEEE
Q 014472 217 LEAMQIFKV-----HEGVVEDVAWHLRHEYLFGSVG-----------DDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLA 280 (424)
Q Consensus 217 ~~~~~~~~~-----~~~~v~~i~~~~~~~~~~~s~~-----------~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~ 280 (424)
+..+.. +...+..++|+|+++.++++.. .++.|.+||+.+++. +..+.. ...+.+++
T Consensus 69 ---~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~---~~~~~~-~~~~~~~~ 141 (337)
T 1pby_B 69 ---LGRIDLSTPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSR---RKAFEA-PRQITMLA 141 (337)
T ss_dssp ---EEEEECCBTTEEEECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEE---EEEEEC-CSSCCCEE
T ss_pred ---EeeEEcCCcccccccccceEECCCCCEEEEEecccccccccccccCceEEEEECCCCcE---EEEEeC-CCCcceeE
Confidence 222221 1236788999999986654431 579999999987553 333332 45688899
Q ss_pred ecCCCCeEEEEEeCCCcEEEEECCCCCCcceeecCCCCCEEEEEEcCCCCcEEEEEeCCC--------------------
Q 014472 281 FNPFNEWILATGSTDKTVKLFDLRKISTALHTFDSHKEEVFQVGWNPKNETILASCCLGR-------------------- 340 (424)
Q Consensus 281 ~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~s~~~dg-------------------- 340 (424)
|+|+++. |+++ ++.|.+||+.+ ++.+..+..+.. ...+.|+|++..+++++..++
T Consensus 142 ~s~dg~~-l~~~--~~~i~~~d~~~-~~~~~~~~~~~~-~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (337)
T 1pby_B 142 WARDGSK-LYGL--GRDLHVMDPEA-GTLVEDKPIQSW-EAETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTA 216 (337)
T ss_dssp ECTTSSC-EEEE--SSSEEEEETTT-TEEEEEECSTTT-TTTTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGG
T ss_pred ECCCCCE-EEEe--CCeEEEEECCC-CcEeeeeecccc-CCCceeCCCccEEeeeccCCCceeeeeeccccccccccccc
Confidence 9999986 4455 68999999987 566655554331 113378999875554444444
Q ss_pred ---eEEEeeCCCCCcccCCCccCCCCCeeeEEEcCCCCCcceEEeCCCCCcEEEEEeCCCcEEEEecCCCC
Q 014472 341 ---RLMVWDLSRIDEEQTPEDAEDGPPELLFIHGGHTSKISDFSWNPCEDWVISSVAEDNILQIWQMAENI 408 (424)
Q Consensus 341 ---~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~ 408 (424)
.|.+||+.++.. . ......+...+.+++|+|++++ ++++ ++.|.+||+.++.
T Consensus 217 ~~~~v~~~d~~~~~~------------~-~~~~~~~~~~~~~~~~s~dg~~-l~~~--~~~v~~~d~~~~~ 271 (337)
T 1pby_B 217 YRTGLLTMDLETGEM------------A-MREVRIMDVFYFSTAVNPAKTR-AFGA--YNVLESFDLEKNA 271 (337)
T ss_dssp EEEEEEEEETTTCCE------------E-EEEEEECSSCEEEEEECTTSSE-EEEE--ESEEEEEETTTTE
T ss_pred cccceEEEeCCCCCc------------e-EeecCCCCCceeeEEECCCCCE-EEEe--CCeEEEEECCCCc
Confidence 368899887532 1 2333445567889999999995 5555 6899999998764
No 159
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.78 E-value=3.2e-16 Score=142.22 Aligned_cols=243 Identities=16% Similarity=0.116 Sum_probs=173.7
Q ss_pred CceeEEEecCCCCcEEEEEecC------------------------CeEEEEeCCCCCCCCCCCCCCCCcEEEe-cCCCC
Q 014472 126 GEVNRARYMPQNPFLIATKTVS------------------------AEVYVFDYSKHPSKPPLDGACSPDLRLR-GHSTE 180 (424)
Q Consensus 126 ~~v~~i~~~p~~~~~latg~~d------------------------g~v~iwd~~~~~~~~~~~~~~~~~~~~~-~h~~~ 180 (424)
+.+.+|+++|++. ++++...+ +.|.+||..+ ......+. ++-..
T Consensus 24 ~~v~~va~d~~G~-l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~----------g~~~~~~~~~~~~~ 92 (329)
T 3fvz_A 24 GQVSGVALDSKNN-LVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNN----------AEILQSSGKNLFYL 92 (329)
T ss_dssp SCEEEEEECTTCC-EEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTT----------CCEEEEECTTTCSS
T ss_pred CCceEEEECCCCC-EEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCC----------CeEEeccCCCccCC
Confidence 5789999999986 77776666 4799999865 22222222 34457
Q ss_pred eeeEEecCCCCceEEEEeCCCcEEEEeCCCCCCCCcccceeee---------ecCCcceeeEEeeCCCCcEEEEEe-CCC
Q 014472 181 GYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIF---------KVHEGVVEDVAWHLRHEYLFGSVG-DDQ 250 (424)
Q Consensus 181 v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~---------~~~~~~v~~i~~~~~~~~~~~s~~-~dg 250 (424)
..+|++++++. ++++...++.|++|+...... .+..+ ..+-..+..++++|++..++++.+ .++
T Consensus 93 p~gia~d~~g~-l~v~d~~~~~v~~~~~~g~~~-----~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~ 166 (329)
T 3fvz_A 93 PHGLSIDTDGN-YWVTDVALHQVFKLDPHSKEG-----PLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNS 166 (329)
T ss_dssp EEEEEECTTSC-EEEEETTTTEEEEECTTCSSC-----CSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSCC
T ss_pred ceEEEECCCCC-EEEEECCCCEEEEEeCCCCeE-----EEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCCC
Confidence 88999999887 788888889999999864311 11111 233446889999994445777776 689
Q ss_pred eEEEEECCCCCCCCCeeEecc----------cCCCeeEEEecCCCCeEEEEEeCCCcEEEEECCCCCCcceeec--CCCC
Q 014472 251 YLLIWDLRTPSVSKPVQSVVA----------HQSEVNCLAFNPFNEWILATGSTDKTVKLFDLRKISTALHTFD--SHKE 318 (424)
Q Consensus 251 ~i~i~d~~~~~~~~~~~~~~~----------~~~~v~~i~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~--~~~~ 318 (424)
.|++||.. +.. +..+.. +-.....|+++|++..++++...++.|++||..+ ++.+..+. .+..
T Consensus 167 ~I~~~~~~-g~~---~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~-G~~~~~~~~~~~~~ 241 (329)
T 3fvz_A 167 RIVQFSPS-GKF---VTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDT-KEFVREIKHASFGR 241 (329)
T ss_dssp EEEEECTT-SCE---EEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTT-CCEEEEECCTTTTT
T ss_pred eEEEEcCC-CCE---EEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCC-CcEEEEEeccccCC
Confidence 99999943 332 333322 2234889999998566888888899999999985 56666663 4567
Q ss_pred CEEEEEEcCCCCcEEEEEe-------CCCeEEEeeCCCCCcccCCCccCCCCCeeeEEE---cCCCCCcceEEeCCCCCc
Q 014472 319 EVFQVGWNPKNETILASCC-------LGRRLMVWDLSRIDEEQTPEDAEDGPPELLFIH---GGHTSKISDFSWNPCEDW 388 (424)
Q Consensus 319 ~v~~~~~sp~~~~~l~s~~-------~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~---~~h~~~v~~~~~~~~~~~ 388 (424)
.+..++|+| + .++++.+ .+..|++|++.++ +++..+ .++...+.+++++|+|.
T Consensus 242 ~~~~~~~~p-g-~~~~~~g~~~v~~~~~~~v~~~~~~~g--------------~~~~~~~~~~~~~~~p~~ia~~~dG~- 304 (329)
T 3fvz_A 242 NVFAISYIP-G-FLFAVNGKPYFGDQEPVQGFVMNFSSG--------------EIIDVFKPVRKHFDMPHDIVASEDGT- 304 (329)
T ss_dssp CEEEEEEET-T-EEEEEECCCCTTCSCCCCEEEEETTTC--------------CEEEEECCSSSCCSSEEEEEECTTSE-
T ss_pred CcceeeecC-C-EEEEeCCCEEeccCCCcEEEEEEcCCC--------------eEEEEEcCCCCccCCeeEEEECCCCC-
Confidence 889999999 3 3343333 3448999998775 334444 35666789999999996
Q ss_pred EEEEEeCCCcEEEEecCCC
Q 014472 389 VISSVAEDNILQIWQMAEN 407 (424)
Q Consensus 389 ~l~s~~~d~~i~iw~~~~~ 407 (424)
++++...++.|++|++...
T Consensus 305 lyvad~~~~~I~~~~~~~~ 323 (329)
T 3fvz_A 305 VYIGDAHTNTVWKFTLTEK 323 (329)
T ss_dssp EEEEESSSCCEEEEEEEEC
T ss_pred EEEEECCCCEEEEEeCCcc
Confidence 8999999999999998753
No 160
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.77 E-value=6.2e-17 Score=162.87 Aligned_cols=247 Identities=12% Similarity=0.052 Sum_probs=157.4
Q ss_pred ceeEEEecCCCCcEEEEEec---------CCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCCeeeEEecCCCCceEEEE
Q 014472 127 EVNRARYMPQNPFLIATKTV---------SAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSG 197 (424)
Q Consensus 127 ~v~~i~~~p~~~~~latg~~---------dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~ 197 (424)
.+.+++|+|+|+ .||+++. ++.|++||+.+. .......+ ...+..++|+|+|+ .|+.+
T Consensus 61 ~~~~~~~SpDg~-~la~~~~~~~~~~~s~~~~i~~~d~~~g--------~~~~~~~l---~~~~~~~~~SPDG~-~la~~ 127 (719)
T 1z68_A 61 NASNYGLSPDRQ-FVYLESDYSKLWRYSYTATYYIYDLSNG--------EFVRGNEL---PRPIQYLCWSPVGS-KLAYV 127 (719)
T ss_dssp TCSEEEECTTSS-EEEEEEEEEECSSSCEEEEEEEEETTTT--------EECCSSCC---CSSBCCEEECSSTT-CEEEE
T ss_pred ceeeEEECCCCC-eEEEEecCceeEEeecceEEEEEECCCC--------ccccceec---CcccccceECCCCC-EEEEE
Confidence 389999999998 6666665 689999999872 11000111 24688999999998 57776
Q ss_pred eCCCcEEEEeCCCCCCCCccc---ceeeeecCCcc---------eeeEEeeCCCCcEEEEEeCCC---------------
Q 014472 198 SDDAQICLWDINAAPKNKSLE---AMQIFKVHEGV---------VEDVAWHLRHEYLFGSVGDDQ--------------- 250 (424)
Q Consensus 198 ~~dg~i~vwd~~~~~~~~~~~---~~~~~~~~~~~---------v~~i~~~~~~~~~~~s~~~dg--------------- 250 (424)
. ++.|++|++.++....... ....+.++... ..+++|+|+|+.++ +++.|.
T Consensus 128 ~-~~~i~~~~~~~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~~wSPDG~~la-~~~~d~~~~~~~~~~~~~~~~ 205 (719)
T 1z68_A 128 Y-QNNIYLKQRPGDPPFQITFNGRENKIFNGIPDWVYEEEMLATKYALWWSPNGKFLA-YAEFNDTDIPVIAYSYYGDEQ 205 (719)
T ss_dssp E-TTEEEEESSTTSCCEECCCCCBTTTEEESSCCHHHHHHTTCSSCCEEECTTSSEEE-EEEEECTTSCEEEEEECCSSS
T ss_pred E-CCeEEEEeCCCCCcEEEecCCCcCCeEcccccceeeeecccCcccEEECCCCCEEE-EEEECCCCCceEEeeccCCCC
Confidence 5 7899999998764311000 00011222222 25899999998654 555431
Q ss_pred -------------------eEEEEECCCCCCCC--Ce---eEecccCCCeeEEEecCCCCeEEEEEeCC----CcEEEEE
Q 014472 251 -------------------YLLIWDLRTPSVSK--PV---QSVVAHQSEVNCLAFNPFNEWILATGSTD----KTVKLFD 302 (424)
Q Consensus 251 -------------------~i~i~d~~~~~~~~--~~---~~~~~~~~~v~~i~~~~~~~~~l~~g~~d----g~i~iwd 302 (424)
.|++||+.++.... .+ ..+..|...+.+++|+|++. ++++.... ..|.+||
T Consensus 206 ~~~~~~~~yp~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~SpD~~-~~~~~~~~~~~~~~l~~~d 284 (719)
T 1z68_A 206 YPRTINIPYPKAGAKNPVVRIFIIDTTYPAYVGPQEVPVPAMIASSDYYFSWLTWVTDER-VCLQWLKRVQNVSVLSICD 284 (719)
T ss_dssp SCEEEEEECCBTTSCCCEEEEEEEESSCHHHHCCEECCCCHHHHTSCEEEEEEEESSSSE-EEEEEEESSTTEEEEEEEE
T ss_pred CccceeecCCCCCCCCCeeEEEEEECCCCCccceeEccCCccCCCCcceEEEeEEeCCCe-EEEEEeccccCeEEEEEEc
Confidence 78899998754210 00 12335777899999999965 66664432 2488899
Q ss_pred ----CCCCCCcceee----cCCCCCEE-----EEEEcCCCCcEEE-EEeCCCe--EEEeeCCCCCcccCCCccCCCCCee
Q 014472 303 ----LRKISTALHTF----DSHKEEVF-----QVGWNPKNETILA-SCCLGRR--LMVWDLSRIDEEQTPEDAEDGPPEL 366 (424)
Q Consensus 303 ----~~~~~~~~~~~----~~~~~~v~-----~~~~sp~~~~~l~-s~~~dg~--i~iwd~~~~~~~~~~~~~~~~~~~~ 366 (424)
+.+ ++....+ ..|...+. .+.|+|+|+.+++ ++..+|. |.+|++..+.
T Consensus 285 ~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~g~~~l~~~~~~~~~--------------- 348 (719)
T 1z68_A 285 FREDWQT-WDCPKTQEHIEESRTGWAGGFFVSTPVFSYDAISYYKIFSDKDGYKHIHYIKDTVEN--------------- 348 (719)
T ss_dssp ECSSSSS-EECCGGGEEEEECSSSCSSSSSCCCCEECTTSSCEEEEEECTTSCEEEEEESSCSTT---------------
T ss_pred ccCCCCC-CceEEEEecccccCCceEccccCCccEECCCCCeEEEEEEccCCceEEEEEECCCCc---------------
Confidence 765 4444444 35666676 8899999986554 3445664 5566665432
Q ss_pred eEEEcCCCCCcceEEeCCCCCcEEEEEeC----CCcEEEEecCC
Q 014472 367 LFIHGGHTSKISDFSWNPCEDWVISSVAE----DNILQIWQMAE 406 (424)
Q Consensus 367 ~~~~~~h~~~v~~~~~~~~~~~~l~s~~~----d~~i~iw~~~~ 406 (424)
...+..+...+..+.+. ++..+++++.. ++..++|.+..
T Consensus 349 ~~~lt~~~~~v~~~~~~-d~~~i~~~~~~~~~~~~~~~l~~~~~ 391 (719)
T 1z68_A 349 AIQITSGKWEAINIFRV-TQDSLFYSSNEFEEYPGRRNIYRISI 391 (719)
T ss_dssp CEECSCSSSCEEEEEEE-CSSEEEEEESCGGGCTTCBEEEEEEC
T ss_pred eEecccCceEEEEEEEE-eCCEEEEEEecCCCCCceEEEEEEeC
Confidence 22334445557777777 78766666554 58899998864
No 161
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.76 E-value=5.8e-18 Score=170.36 Aligned_cols=240 Identities=10% Similarity=0.078 Sum_probs=158.2
Q ss_pred EEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCC---CeeeEEecCCCCceEEEEeC-------
Q 014472 130 RARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHST---EGYGLSWSKFKEGHLLSGSD------- 199 (424)
Q Consensus 130 ~i~~~p~~~~~latg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~h~~---~v~~l~~~~~~~~~l~s~~~------- 199 (424)
.++|+|++. ++++ +.|+.|++||+.. ......+.+|.. .+.+++|+|+|+ +|++++.
T Consensus 20 ~~~~s~dg~-~~~~-~~d~~i~~~~~~~----------g~~~~~~~~~~~~~~~~~~~~~SpDg~-~la~~~~~~~~~~~ 86 (719)
T 1z68_A 20 FPNWISGQE-YLHQ-SADNNIVLYNIET----------GQSYTILSNRTMKSVNASNYGLSPDRQ-FVYLESDYSKLWRY 86 (719)
T ss_dssp CCEESSSSE-EEEE-CTTSCEEEEESSS----------CCEEEEECHHHHHTTTCSEEEECTTSS-EEEEEEEEEECSSS
T ss_pred ccEECCCCe-EEEE-cCCCCEEEEEcCC----------CcEEEEEccccccccceeeEEECCCCC-eEEEEecCceeEEe
Confidence 689999994 6665 4699999999987 233333444433 489999999998 6777765
Q ss_pred --CCcEEEEeCCCCCCCCcccceeeeecCCcceeeEEeeCCCCcEEEEEeCCCeEEEEECCCCCCCCCeeEe-cccCCC-
Q 014472 200 --DAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSV-VAHQSE- 275 (424)
Q Consensus 200 --dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~~s~~~dg~i~i~d~~~~~~~~~~~~~-~~~~~~- 275 (424)
++.|++||+.++..... .. ....+..++|+|+|+.++ .+ .++.|++||+.++.. .... .++...
T Consensus 87 s~~~~i~~~d~~~g~~~~~----~~---l~~~~~~~~~SPDG~~la-~~-~~~~i~~~~~~~g~~---~~l~~~~~~~~v 154 (719)
T 1z68_A 87 SYTATYYIYDLSNGEFVRG----NE---LPRPIQYLCWSPVGSKLA-YV-YQNNIYLKQRPGDPP---FQITFNGRENKI 154 (719)
T ss_dssp CEEEEEEEEETTTTEECCS----SC---CCSSBCCEEECSSTTCEE-EE-ETTEEEEESSTTSCC---EECCCCCBTTTE
T ss_pred ecceEEEEEECCCCccccc----ee---cCcccccceECCCCCEEE-EE-ECCeEEEEeCCCCCc---EEEecCCCcCCe
Confidence 78999999987632100 11 124688999999998654 55 478999999987653 2111 122222
Q ss_pred ----------------eeEEEecCCCCeEEEEEeCCC----------------------------------cEEEEECCC
Q 014472 276 ----------------VNCLAFNPFNEWILATGSTDK----------------------------------TVKLFDLRK 305 (424)
Q Consensus 276 ----------------v~~i~~~~~~~~~l~~g~~dg----------------------------------~i~iwd~~~ 305 (424)
..+++|+|+|+. ||+++.|. .|++||+.+
T Consensus 155 ~~g~~~~v~~ee~~~~~~~~~wSPDG~~-la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~ 233 (719)
T 1z68_A 155 FNGIPDWVYEEEMLATKYALWWSPNGKF-LAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTY 233 (719)
T ss_dssp EESSCCHHHHHHTTCSSCCEEECTTSSE-EEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEESSC
T ss_pred EcccccceeeeecccCcccEEECCCCCE-EEEEEECCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEECCC
Confidence 258999999995 66665442 788999986
Q ss_pred CCCcc--------eeecCCCCCEEEEEEcCCCCcEEEEEeCC----CeEEEee----CCCCCcccCCCccCCCCCeee-E
Q 014472 306 ISTAL--------HTFDSHKEEVFQVGWNPKNETILASCCLG----RRLMVWD----LSRIDEEQTPEDAEDGPPELL-F 368 (424)
Q Consensus 306 ~~~~~--------~~~~~~~~~v~~~~~sp~~~~~l~s~~~d----g~i~iwd----~~~~~~~~~~~~~~~~~~~~~-~ 368 (424)
+... ..+..|...+.+++|+|++. ++++.... ..|.+|| +.++... .++ .
T Consensus 234 -~~~~~~~~~~~~~~~~~~~~~~~~~~~SpD~~-~~~~~~~~~~~~~~l~~~d~~~~~~~g~~~-----------~~~~~ 300 (719)
T 1z68_A 234 -PAYVGPQEVPVPAMIASSDYYFSWLTWVTDER-VCLQWLKRVQNVSVLSICDFREDWQTWDCP-----------KTQEH 300 (719)
T ss_dssp -HHHHCCEECCCCHHHHTSCEEEEEEEESSSSE-EEEEEEESSTTEEEEEEEEECSSSSSEECC-----------GGGEE
T ss_pred -CCccceeEccCCccCCCCcceEEEeEEeCCCe-EEEEEeccccCeEEEEEEcccCCCCCCceE-----------EEEec
Confidence 3332 22345788899999999974 66664432 2488888 6554321 111 1
Q ss_pred EEcCCCCCcc-----eEEeCCCCCcEEE-EEeCCC--cEEEEecCCCC
Q 014472 369 IHGGHTSKIS-----DFSWNPCEDWVIS-SVAEDN--ILQIWQMAENI 408 (424)
Q Consensus 369 ~~~~h~~~v~-----~~~~~~~~~~~l~-s~~~d~--~i~iw~~~~~~ 408 (424)
...+|...+. .+.|+|+|+.+++ +...+| .|.+|++.++.
T Consensus 301 ~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~g~~~l~~~~~~~~~ 348 (719)
T 1z68_A 301 IEESRTGWAGGFFVSTPVFSYDAISYYKIFSDKDGYKHIHYIKDTVEN 348 (719)
T ss_dssp EEECSSSCSSSSSCCCCEECTTSSCEEEEEECTTSCEEEEEESSCSTT
T ss_pred ccccCCceEccccCCccEECCCCCeEEEEEEccCCceEEEEEECCCCc
Confidence 1135566666 8899999996544 344555 46666766554
No 162
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.76 E-value=2e-15 Score=134.06 Aligned_cols=237 Identities=15% Similarity=0.149 Sum_probs=165.4
Q ss_pred CCceeEEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEe------cCCCCeeeEEec-CCCCceEEEE
Q 014472 125 DGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLR------GHSTEGYGLSWS-KFKEGHLLSG 197 (424)
Q Consensus 125 ~~~v~~i~~~p~~~~~latg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~------~h~~~v~~l~~~-~~~~~~l~s~ 197 (424)
-..+.+++++|++. ++++...++.|.+|+... .....+. ++...+.++++. +++. ++++.
T Consensus 29 ~~~p~~v~~~~~g~-l~v~~~~~~~i~~~d~~g-----------~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~-l~v~~ 95 (286)
T 1q7f_A 29 FTEPSGVAVNAQND-IIVADTNNHRIQIFDKEG-----------RFKFQFGECGKRDSQLLYPNRVAVVRNSGD-IIVTE 95 (286)
T ss_dssp BSCEEEEEECTTCC-EEEEEGGGTEEEEECTTS-----------CEEEEECCBSSSTTCBSSEEEEEEETTTTE-EEEEE
T ss_pred cCCCceEEECCCCC-EEEEECCCCEEEEECCCC-----------cEEEEecccCCCcccccCceEEEEEcCCCe-EEEEc
Confidence 35678999999886 788878889999999764 1222232 234568899995 5443 45554
Q ss_pred eC-CCcEEEEeCCCCCCCCcccceeeee-cCCcceeeEEeeCCCCcEEEEEeCCCeEEEEECCCCCCCCCeeEec--ccC
Q 014472 198 SD-DAQICLWDINAAPKNKSLEAMQIFK-VHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVV--AHQ 273 (424)
Q Consensus 198 ~~-dg~i~vwd~~~~~~~~~~~~~~~~~-~~~~~v~~i~~~~~~~~~~~s~~~dg~i~i~d~~~~~~~~~~~~~~--~~~ 273 (424)
.. ++.|.+||.. +. .+..+. .+...+.++++++++. ++++...++.|.+||... . .+..+. .+.
T Consensus 96 ~~~~~~i~~~d~~-g~------~~~~~~~~~~~~~~~i~~~~~g~-l~v~~~~~~~i~~~~~~g-~---~~~~~~~~~~~ 163 (286)
T 1q7f_A 96 RSPTHQIQIYNQY-GQ------FVRKFGATILQHPRGVTVDNKGR-IIVVECKVMRVIIFDQNG-N---VLHKFGCSKHL 163 (286)
T ss_dssp CGGGCEEEEECTT-SC------EEEEECTTTCSCEEEEEECTTSC-EEEEETTTTEEEEECTTS-C---EEEEEECTTTC
T ss_pred CCCCCEEEEECCC-Cc------EEEEecCccCCCceEEEEeCCCC-EEEEECCCCEEEEEcCCC-C---EEEEeCCCCcc
Confidence 33 7899999943 32 122222 2345789999999985 776777789999999653 2 133332 344
Q ss_pred CCeeEEEecCCCCeEEEEEeCCCcEEEEECCCCCCcceeecCC--CCCEEEEEEcCCCCcEEEEEeCCC-eEEEeeCCCC
Q 014472 274 SEVNCLAFNPFNEWILATGSTDKTVKLFDLRKISTALHTFDSH--KEEVFQVGWNPKNETILASCCLGR-RLMVWDLSRI 350 (424)
Q Consensus 274 ~~v~~i~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~--~~~v~~~~~sp~~~~~l~s~~~dg-~i~iwd~~~~ 350 (424)
..+..|++++++. ++++...++.|++||.. +..+..+..+ ...+..+++++++. ++++...++ .|.+|+...
T Consensus 164 ~~p~~i~~~~~g~-l~v~~~~~~~i~~~~~~--g~~~~~~~~~g~~~~p~~i~~d~~G~-l~v~~~~~~~~i~~~~~~g- 238 (286)
T 1q7f_A 164 EFPNGVVVNDKQE-IFISDNRAHCVKVFNYE--GQYLRQIGGEGITNYPIGVGINSNGE-ILIADNHNNFNLTIFTQDG- 238 (286)
T ss_dssp SSEEEEEECSSSE-EEEEEGGGTEEEEEETT--CCEEEEESCTTTSCSEEEEEECTTCC-EEEEECSSSCEEEEECTTS-
T ss_pred CCcEEEEECCCCC-EEEEECCCCEEEEEcCC--CCEEEEEccCCccCCCcEEEECCCCC-EEEEeCCCCEEEEEECCCC-
Confidence 5789999999886 77777788999999975 3555555443 36789999999985 777777775 999999643
Q ss_pred CcccCCCccCCCCCeeeEEEcCC--CCCcceEEeCCCCCcEEEEEeCCCcEEEEecCCC
Q 014472 351 DEEQTPEDAEDGPPELLFIHGGH--TSKISDFSWNPCEDWVISSVAEDNILQIWQMAEN 407 (424)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~~~~~h--~~~v~~~~~~~~~~~~l~s~~~d~~i~iw~~~~~ 407 (424)
..+..+..+ ...+.+++++|+|. ++++ +.++.|++|++...
T Consensus 239 --------------~~~~~~~~~~~~~~~~~i~~~~~g~-l~vs-~~~~~v~v~~~~~~ 281 (286)
T 1q7f_A 239 --------------QLISALESKVKHAQCFDVALMDDGS-VVLA-SKDYRLYIYRYVQL 281 (286)
T ss_dssp --------------CEEEEEEESSCCSCEEEEEEETTTE-EEEE-ETTTEEEEEECSCC
T ss_pred --------------CEEEEEcccCCCCcceeEEECCCCc-EEEE-CCCCeEEEEEcccc
Confidence 223333222 23467899999998 6777 57999999998653
No 163
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.76 E-value=1.6e-16 Score=147.56 Aligned_cols=250 Identities=13% Similarity=0.108 Sum_probs=158.7
Q ss_pred ccCCceeE-----EEecCCCCcEEEEEec-CC--eEEEEeCCCCCCCCCCCCCCCCcEEEecCCCCeeeEEecCCCCceE
Q 014472 123 NHDGEVNR-----ARYMPQNPFLIATKTV-SA--EVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHL 194 (424)
Q Consensus 123 ~h~~~v~~-----i~~~p~~~~~latg~~-dg--~v~iwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l 194 (424)
.|...... .+|+|+++. ||.++. +| .|.+||+.. ........++...+.++.|+|++. .|
T Consensus 28 ~~~~~~~~~~~~~~~~SpDg~~-l~~~~~~~g~~~l~~~d~~~----------g~~~~lt~~~~~~~~~~~~spdg~-~l 95 (388)
T 3pe7_A 28 PPDVTCHRNYFYQKCFTRDGSK-LLFGGAFDGPWNYYLLDLNT----------QVATQLTEGRGDNTFGGFLSPDDD-AL 95 (388)
T ss_dssp CTTSCEECCCTTSCCBCTTSCE-EEEEECTTSSCEEEEEETTT----------CEEEECCCSSCBCSSSCEECTTSS-EE
T ss_pred CCcccccchhhcCccCCCCCCE-EEEEEcCCCCceEEEEeCCC----------CceEEeeeCCCCCccceEEcCCCC-EE
Confidence 44444444 889999985 555554 67 477888776 222233344555556789999998 68
Q ss_pred EEEeCCCcEEEEeCCCCCCCCcccceeeeecCCcceeeEE--eeCCCCcEEEE---------------------EeCCCe
Q 014472 195 LSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVA--WHLRHEYLFGS---------------------VGDDQY 251 (424)
Q Consensus 195 ~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~i~--~~~~~~~~~~s---------------------~~~dg~ 251 (424)
+.++.++.|++||+.++.. ......+...+.... +++++..+++. ...+..
T Consensus 96 ~~~~~~~~l~~~d~~~g~~------~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (388)
T 3pe7_A 96 FYVKDGRNLMRVDLATLEE------NVVYQVPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCR 169 (388)
T ss_dssp EEEETTTEEEEEETTTCCE------EEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEE
T ss_pred EEEeCCCeEEEEECCCCcc------eeeeechhhcccccceeECCCCCeeccccccCcccccccccchhhhhhccCCcce
Confidence 8888889999999987632 222333444443333 47888754322 123467
Q ss_pred EEEEECCCCCCCCCeeEecccCCCeeEEEecC-CCCeEEEEEeCC------CcEEEEECCCCCCcceeecCCC--CCEEE
Q 014472 252 LLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNP-FNEWILATGSTD------KTVKLFDLRKISTALHTFDSHK--EEVFQ 322 (424)
Q Consensus 252 i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~~-~~~~~l~~g~~d------g~i~iwd~~~~~~~~~~~~~~~--~~v~~ 322 (424)
|.+||+.+++ ...+..+...+..++|+| ++.. |+....+ ..|.++|+.. + ....+..+. ..+..
T Consensus 170 l~~~d~~~g~----~~~l~~~~~~~~~~~~sp~dg~~-l~~~~~~~~~~~~~~l~~~d~~~-~-~~~~l~~~~~~~~~~~ 242 (388)
T 3pe7_A 170 LMRVDLKTGE----STVILQENQWLGHPIYRPYDDST-VAFCHEGPHDLVDARMWLINEDG-T-NMRKVKTHAEGESCTH 242 (388)
T ss_dssp EEEEETTTCC----EEEEEEESSCEEEEEEETTEEEE-EEEEECSCTTTSSCSEEEEETTS-C-CCEESCCCCTTEEEEE
T ss_pred EEEEECCCCc----eEEeecCCccccccEECCCCCCE-EEEEEecCCCCCcceEEEEeCCC-C-ceEEeeeCCCCccccc
Confidence 9999998865 344445677899999999 8885 5544442 3788888764 2 334444444 35888
Q ss_pred EEEcCCCCcEEEEEeCCC----eEEEeeCCCCCcccCCCccCCCCCeeeEEEcCCCC---CcceEEeCCCCCcEEEEE--
Q 014472 323 VGWNPKNETILASCCLGR----RLMVWDLSRIDEEQTPEDAEDGPPELLFIHGGHTS---KISDFSWNPCEDWVISSV-- 393 (424)
Q Consensus 323 ~~~sp~~~~~l~s~~~dg----~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~---~v~~~~~~~~~~~~l~s~-- 393 (424)
++|+|+|+.+++++..++ .|.+||+.++.. ..+....++.. ....++|+|+|+.++++.
T Consensus 243 ~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~------------~~l~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~ 310 (388)
T 3pe7_A 243 EFWVPDGSALVYVSYLKGSPDRFIYSADPETLEN------------RQLTSMPACSHLMSNYDGSLMVGDGSDAPVDVQD 310 (388)
T ss_dssp EEECTTSSCEEEEEEETTCCCEEEEEECTTTCCE------------EEEEEECCEEEEEECTTSSEEEEEECCC------
T ss_pred ceECCCCCEEEEEecCCCCCcceEEEEecCCCce------------EEEEcCCCceeeeecCCCCeEccCCCcceeEeee
Confidence 999999986555444333 399999987542 23333333110 123357999999655443
Q ss_pred ------eCCCcEEEEecCCCCC
Q 014472 394 ------AEDNILQIWQMAENIY 409 (424)
Q Consensus 394 ------~~d~~i~iw~~~~~~~ 409 (424)
..+..|++|++.++..
T Consensus 311 ~~~~~~~~~~~i~~~d~~~~~~ 332 (388)
T 3pe7_A 311 DSGYKIENDPFLYVFNMKNGTQ 332 (388)
T ss_dssp ------CCCCEEEEEETTTTEE
T ss_pred ccccccCCCCEEEEEeccCCce
Confidence 4567899999988643
No 164
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.74 E-value=4.3e-16 Score=157.09 Aligned_cols=246 Identities=11% Similarity=0.096 Sum_probs=160.0
Q ss_pred ceeEEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCC-----eeeEEecCCCCceEEEEeCC-
Q 014472 127 EVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTE-----GYGLSWSKFKEGHLLSGSDD- 200 (424)
Q Consensus 127 ~v~~i~~~p~~~~~latg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~h~~~-----v~~l~~~~~~~~~l~s~~~d- 200 (424)
....++|+|++. +++++ +|.|++|++.+ ......+.+|... ..+++|+|+++ +|+.++.+
T Consensus 18 ~~~~~~w~~dg~-~~~~~--~~~i~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~Spdg~-~l~~~~~~~ 83 (740)
T 4a5s_A 18 KLYSLRWISDHE-YLYKQ--ENNILVFNAEY----------GNSSVFLENSTFDEFGHSINDYSISPDGQ-FILLEYNYV 83 (740)
T ss_dssp CCCCEEECSSSE-EEEEE--TTEEEEEETTT----------CCEEEEECTTTTTTCCSCCCEEEECTTSS-EEEEEEEEE
T ss_pred cccccEECCCCc-EEEEc--CCcEEEEECCC----------CceEEEEechhhhhhcccccceEECCCCC-EEEEEECCe
Confidence 456799999985 77775 89999999987 2334445666543 23478899998 67777765
Q ss_pred --------CcEEEEeCCCCCCCCcccceeeeecCCcceeeEEeeCCCCcEEEEEeCCCeEEEEECCCCCCCCCeeEeccc
Q 014472 201 --------AQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAH 272 (424)
Q Consensus 201 --------g~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~~s~~~dg~i~i~d~~~~~~~~~~~~~~~~ 272 (424)
+.+.+||+.++.. ..+..|...+...+|+|+|+.+ |.+ .++.|++||+.++...+ + +..++
T Consensus 84 ~~~r~~~~~~~~~~d~~~~~~-------~~l~~~~~~~~~~~~SPdG~~l-a~~-~~~~i~~~~~~~~~~~~-l-t~~g~ 152 (740)
T 4a5s_A 84 KQWRHSYTASYDIYDLNKRQL-------ITEERIPNNTQWVTWSPVGHKL-AYV-WNNDIYVKIEPNLPSYR-I-TWTGK 152 (740)
T ss_dssp ECSSSCEEEEEEEEETTTTEE-------CCSSCCCTTEEEEEECSSTTCE-EEE-ETTEEEEESSTTSCCEE-C-CSCCB
T ss_pred eeEEEccceEEEEEECCCCcE-------EEcccCCCcceeeEECCCCCEE-EEE-ECCeEEEEECCCCceEE-E-cCCCC
Confidence 5677999987632 2244567789999999999866 454 57899999998765311 1 11122
Q ss_pred CC-----------------CeeEEEecCCCCeEEEEEeCC-C-----------------------------------cEE
Q 014472 273 QS-----------------EVNCLAFNPFNEWILATGSTD-K-----------------------------------TVK 299 (424)
Q Consensus 273 ~~-----------------~v~~i~~~~~~~~~l~~g~~d-g-----------------------------------~i~ 299 (424)
.. ....+.|+|+|+. ||.++.| + .|+
T Consensus 153 ~~~~~~g~~~~v~~ee~~~~~~~~~wSpDg~~-la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~~~l~ 231 (740)
T 4a5s_A 153 EDIIYNGITDWVYEEEVFSAYSALWWSPNGTF-LAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFF 231 (740)
T ss_dssp TTTEEESBCCHHHHHHTSSSSBCEEECTTSSE-EEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEEEE
T ss_pred ccceecCcccccccchhcCCCcceEECCCCCE-EEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcCcCCeeEEE
Confidence 22 2245899999995 5555422 1 478
Q ss_pred EEECCC---CCC-cceeec------CCCCCEEEEEEcCCCCcEEEEE-eC---CCeEEEeeCCCCC----cccCCCccCC
Q 014472 300 LFDLRK---IST-ALHTFD------SHKEEVFQVGWNPKNETILASC-CL---GRRLMVWDLSRID----EEQTPEDAED 361 (424)
Q Consensus 300 iwd~~~---~~~-~~~~~~------~~~~~v~~~~~sp~~~~~l~s~-~~---dg~i~iwd~~~~~----~~~~~~~~~~ 361 (424)
+||+.+ ... ....+. .|...+..++|+|+++ +++.. .. +..|.+||+.++. +...
T Consensus 232 v~d~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~wspdg~-~~~~~~~r~~~~~~i~~~d~~tg~~~~~~~~~------ 304 (740)
T 4a5s_A 232 VVNTDSLSSVTNATSIQITAPASMLIGDHYLCDVTWATQER-ISLQWLRRIQNYSVMDICDYDESSGRWNCLVA------ 304 (740)
T ss_dssp EEETTSCCSSSCCCEEEECCCHHHHTSCEEEEEEEEEETTE-EEEEEEESSTTEEEEEEEEEETTTTEEEECGG------
T ss_pred EEECCCCCCCCcceEEEecCCccCCCCCeEEEEEEEeCCCe-EEEEEeCCCCCEEEEEEEECCCCccccceeEE------
Confidence 888876 321 223333 2777899999999997 44443 32 2369999998764 1110
Q ss_pred CCCeeeEEEcCCCCCcc-----eEEeCCCCCcEEEEEe-CCC--cEEEEecCCCCC
Q 014472 362 GPPELLFIHGGHTSKIS-----DFSWNPCEDWVISSVA-EDN--ILQIWQMAENIY 409 (424)
Q Consensus 362 ~~~~~~~~~~~h~~~v~-----~~~~~~~~~~~l~s~~-~d~--~i~iw~~~~~~~ 409 (424)
..+ ...+|...|. ...|+|||+.++...+ .+| .|++|++.++..
T Consensus 305 ---~~l-~~~~~~~~v~~~~~~~p~fspDG~~l~~~~s~~~G~~~l~~~~~~~~~~ 356 (740)
T 4a5s_A 305 ---RQH-IEMSTTGWVGRFRPSEPHFTLDGNSFYKIISNEEGYRHICYFQIDKKDC 356 (740)
T ss_dssp ---GCE-EEECSSSCSSSSSCCCCEECTTSSEEEEEEECTTSCEEEEEEETTCSSC
T ss_pred ---EEe-eeccCCceEccCcCCCceEcCCCCEEEEEEEcCCCceEEEEEECCCCce
Confidence 111 1134554444 7899999996552554 444 577788776543
No 165
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.73 E-value=1.1e-15 Score=139.56 Aligned_cols=196 Identities=11% Similarity=0.113 Sum_probs=138.5
Q ss_pred ceeEEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEecC------CCCeeeEEecCCCCceEEEEeCC
Q 014472 127 EVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGH------STEGYGLSWSKFKEGHLLSGSDD 200 (424)
Q Consensus 127 ~v~~i~~~p~~~~~latg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~h------~~~v~~l~~~~~~~~~l~s~~~d 200 (424)
.+..++|+|++..+++++..++.|.+||+.+ ......+..+ ...+.+++|+|++. +|++++.+
T Consensus 44 ~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t----------~~~~~~~~~~~~~~~~~~~~~~~~~spdg~-~l~~~~~~ 112 (349)
T 1jmx_B 44 GPGTAMMAPDNRTAYVLNNHYGDIYGIDLDT----------CKNTFHANLSSVPGEVGRSMYSFAISPDGK-EVYATVNP 112 (349)
T ss_dssp SSCEEEECTTSSEEEEEETTTTEEEEEETTT----------TEEEEEEESCCSTTEEEECSSCEEECTTSS-EEEEEEEE
T ss_pred CCceeEECCCCCEEEEEeCCCCcEEEEeCCC----------CcEEEEEEcccccccccccccceEECCCCC-EEEEEccc
Confidence 6889999999986677777889999999876 2333334322 22378999999988 57777654
Q ss_pred ------------CcEEEEeCCCCCCCCcccceeeeecCCcceeeEEeeCCCCcEEEEEeCCCeEEEEECCCCCCCCCeeE
Q 014472 201 ------------AQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQS 268 (424)
Q Consensus 201 ------------g~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~~s~~~dg~i~i~d~~~~~~~~~~~~ 268 (424)
+.|.+||+.++... ..+.... +...+.+++|+|+++ +++ ++ +.|.+||+.+++. +..
T Consensus 113 ~~~~~~~~~~~~~~i~~~d~~~~~~~---~~~~~~~-~~~~~~~~~~s~dg~-l~~-~~--~~i~~~d~~~~~~---~~~ 181 (349)
T 1jmx_B 113 TQRLNDHYVVKPPRLEVFSTADGLEA---KPVRTFP-MPRQVYLMRAADDGS-LYV-AG--PDIYKMDVKTGKY---TVA 181 (349)
T ss_dssp EEECSSCEEECCCEEEEEEGGGGGGB---CCSEEEE-CCSSCCCEEECTTSC-EEE-ES--SSEEEECTTTCCE---EEE
T ss_pred ccccccccccCCCeEEEEECCCcccc---ceeeecc-CCCcccceeECCCCc-EEE-cc--CcEEEEeCCCCce---ecc
Confidence 89999999764321 1222222 344688999999998 664 43 3499999987653 222
Q ss_pred eccc--------------------------------------------------------------------CCCeeEEE
Q 014472 269 VVAH--------------------------------------------------------------------QSEVNCLA 280 (424)
Q Consensus 269 ~~~~--------------------------------------------------------------------~~~v~~i~ 280 (424)
+..+ ...+..++
T Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (349)
T 1jmx_B 182 LPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVDLKTGKTHTQEFADLTELYFTGL 261 (349)
T ss_dssp ECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CCCEEEEEEEEEETTTCCEEEEEEEECSSCEEEEE
T ss_pred ccccccCCccccCccceeeecCCCcceeEEeeeeeeecCCCcCCccccccceeEEEEeccCCcEEecccccCCCcceeeE
Confidence 2111 12456778
Q ss_pred ecC-CCCeEEEEEeCCCcEEEEECCCCCCcceeecCCCCCEEEEEEcCCCCcEEEEEeCCCeEEEeeCCCC
Q 014472 281 FNP-FNEWILATGSTDKTVKLFDLRKISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRI 350 (424)
Q Consensus 281 ~~~-~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~s~~~dg~i~iwd~~~~ 350 (424)
|+| +++. ++++ ++.|.+||+.+ ++.+..+.. ...+.+++|+|+++. |++++.++.|.+||+.+.
T Consensus 262 ~sp~dg~~-l~~~--~~~v~~~d~~~-~~~~~~~~~-~~~~~~~~~s~dg~~-l~~~~~~~~v~v~d~~~~ 326 (349)
T 1jmx_B 262 RSPKDPNQ-IYGV--LNRLAKYDLKQ-RKLIKAANL-DHTYYCVAFDKKGDK-LYLGGTFNDLAVFNPDTL 326 (349)
T ss_dssp ECSSCTTE-EEEE--ESEEEEEETTT-TEEEEEEEC-SSCCCEEEECSSSSC-EEEESBSSEEEEEETTTT
T ss_pred ecCCCCCE-EEEE--cCeEEEEECcc-CeEEEEEcC-CCCccceEECCCCCE-EEEecCCCeEEEEecccc
Confidence 889 8885 5555 88999999987 566566553 345789999999975 555778899999999875
No 166
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.71 E-value=7.4e-16 Score=143.05 Aligned_cols=243 Identities=7% Similarity=0.007 Sum_probs=152.5
Q ss_pred cCCceeEEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCCeeeEEe--cCCCCceEEE-----
Q 014472 124 HDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSW--SKFKEGHLLS----- 196 (424)
Q Consensus 124 h~~~v~~i~~~p~~~~~latg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~--~~~~~~~l~s----- 196 (424)
|...+..++|+|+++ .|+.++.++.|++||+.+ ......+..+...+....| ++++. +++.
T Consensus 79 ~~~~~~~~~~spdg~-~l~~~~~~~~l~~~d~~~----------g~~~~~~~~~~~~~~~~~~~~~~dg~-~l~~~~~~~ 146 (388)
T 3pe7_A 79 RGDNTFGGFLSPDDD-ALFYVKDGRNLMRVDLAT----------LEENVVYQVPAEWVGYGTWVANSDCT-KLVGIEIRR 146 (388)
T ss_dssp SCBCSSSCEECTTSS-EEEEEETTTEEEEEETTT----------CCEEEEEECCTTEEEEEEEEECTTSS-EEEEEEEEG
T ss_pred CCCCccceEEcCCCC-EEEEEeCCCeEEEEECCC----------CcceeeeechhhcccccceeECCCCC-eeccccccC
Confidence 334445688999997 677778888999999987 2333334445544444444 78776 4543
Q ss_pred -----------------EeCCCcEEEEeCCCCCCCCcccceeeeecCCcceeeEEeeC-CCCcEEEEEeC------CCeE
Q 014472 197 -----------------GSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHL-RHEYLFGSVGD------DQYL 252 (424)
Q Consensus 197 -----------------~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~-~~~~~~~s~~~------dg~i 252 (424)
...+..|.+||+.++. ...+..+...+..++|+| ++..++ .+.. ...|
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~-------~~~l~~~~~~~~~~~~sp~dg~~l~-~~~~~~~~~~~~~l 218 (388)
T 3pe7_A 147 EDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTGE-------STVILQENQWLGHPIYRPYDDSTVA-FCHEGPHDLVDARM 218 (388)
T ss_dssp GGCCCCCSHHHHHHHGGGCCCEEEEEEETTTCC-------EEEEEEESSCEEEEEEETTEEEEEE-EEECSCTTTSSCSE
T ss_pred cccccccccchhhhhhccCCcceEEEEECCCCc-------eEEeecCCccccccEECCCCCCEEE-EEEecCCCCCcceE
Confidence 2245789999998763 223334667789999999 887554 4443 3378
Q ss_pred EEEECCCCCCCCCeeEecccC--CCeeEEEecCCCCeEEEEEeCCC----cEEEEECCCCCC-cceeecCCCCC---EEE
Q 014472 253 LIWDLRTPSVSKPVQSVVAHQ--SEVNCLAFNPFNEWILATGSTDK----TVKLFDLRKIST-ALHTFDSHKEE---VFQ 322 (424)
Q Consensus 253 ~i~d~~~~~~~~~~~~~~~~~--~~v~~i~~~~~~~~~l~~g~~dg----~i~iwd~~~~~~-~~~~~~~~~~~---v~~ 322 (424)
.++|+.... ...+..+. ..+..++|+|+|+.+++++..++ .|++||+.+... .+..+..+... ...
T Consensus 219 ~~~d~~~~~----~~~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~ 294 (388)
T 3pe7_A 219 WLINEDGTN----MRKVKTHAEGESCTHEFWVPDGSALVYVSYLKGSPDRFIYSADPETLENRQLTSMPACSHLMSNYDG 294 (388)
T ss_dssp EEEETTSCC----CEESCCCCTTEEEEEEEECTTSSCEEEEEEETTCCCEEEEEECTTTCCEEEEEEECCEEEEEECTTS
T ss_pred EEEeCCCCc----eEEeeeCCCCcccccceECCCCCEEEEEecCCCCCcceEEEEecCCCceEEEEcCCCceeeeecCCC
Confidence 888876644 23333333 25778999999997545444333 399999987321 22233221000 112
Q ss_pred EEEcCCCCcEEEEE--------eCCCeEEEeeCCCCCcccCCCccCCCCCeeeEEEcCCCC-----------CcceEEeC
Q 014472 323 VGWNPKNETILASC--------CLGRRLMVWDLSRIDEEQTPEDAEDGPPELLFIHGGHTS-----------KISDFSWN 383 (424)
Q Consensus 323 ~~~sp~~~~~l~s~--------~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~-----------~v~~~~~~ 383 (424)
+.|+|+|+.++++. ..+..|.+||+..+. +..+..|.. .+..++|+
T Consensus 295 ~~~spdg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~---------------~~~l~~~~~~~~~~~~~~~~~~~~~~~s 359 (388)
T 3pe7_A 295 SLMVGDGSDAPVDVQDDSGYKIENDPFLYVFNMKNGT---------------QHRVARHDTSWKVFEGDRQVTHPHPSFT 359 (388)
T ss_dssp SEEEEEECCC------------CCCCEEEEEETTTTE---------------EEEEEECCCCCCCBTTBSSTTCCCCEEC
T ss_pred CeEccCCCcceeEeeeccccccCCCCEEEEEeccCCc---------------eEEeccccCcccccccccccCCCCccCC
Confidence 37999998655443 456689999998742 122223333 47889999
Q ss_pred CCCCcEEEEEeCCCcEEEEecC
Q 014472 384 PCEDWVISSVAEDNILQIWQMA 405 (424)
Q Consensus 384 ~~~~~~l~s~~~d~~i~iw~~~ 405 (424)
|+|+.+++++..++...||.+.
T Consensus 360 pDg~~l~~~s~~~g~~~l~~~~ 381 (388)
T 3pe7_A 360 PDDKQILFTSDVHGKPALYLAT 381 (388)
T ss_dssp TTSSEEEEEECTTSSCEEEEEE
T ss_pred CCCCEEEEEecCCCceeEEEEE
Confidence 9999766676678888887654
No 167
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.71 E-value=2.5e-15 Score=149.64 Aligned_cols=247 Identities=8% Similarity=-0.005 Sum_probs=163.2
Q ss_pred EeccCCceeEEEecCCCCcEEEEE--ecCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCCee---------eEEec--
Q 014472 121 QINHDGEVNRARYMPQNPFLIATK--TVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGY---------GLSWS-- 187 (424)
Q Consensus 121 ~~~h~~~v~~i~~~p~~~~~latg--~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~---------~l~~~-- 187 (424)
...|...+..++|+++. .+++.. +.++...||.... ......+..|...+. ...|+
T Consensus 19 ~~~~~~~~~~~~~s~~~-~~~~~~~~~~~~~~~l~~~~~----------~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~S 87 (662)
T 3azo_A 19 VASRSGRPACVGAVGDE-VWWVAPRPAEAGRATLVRRRA----------DGAEESALPAPWNVRNRVFEYSGFPWAGVPR 87 (662)
T ss_dssp HHHTCSCCEEEEEETTE-EEEEEEETTTTTEEEEEEECT----------TSCEEESSCTTCCBCCCGGGTCCCCEEEECC
T ss_pred HhhcCCccceeEEcCCe-EEEEecCcccCCcEEEEEECC----------CCCcceeCCCCccccccccccCCccceeeee
Confidence 34688999999999864 355555 4578999999633 122345555655555 66666
Q ss_pred CCCCc-eEEEEeCCCcEEEEeCC--C-CCCCCcccceeeeec-----CCcceeeEEeeCCCCcEEEEEeCC---------
Q 014472 188 KFKEG-HLLSGSDDAQICLWDIN--A-APKNKSLEAMQIFKV-----HEGVVEDVAWHLRHEYLFGSVGDD--------- 249 (424)
Q Consensus 188 ~~~~~-~l~s~~~dg~i~vwd~~--~-~~~~~~~~~~~~~~~-----~~~~v~~i~~~~~~~~~~~s~~~d--------- 249 (424)
|++.. ++++...+..|.++++. . +. . ..+.. |...+.+++|+|+++.++ +++.+
T Consensus 88 PDg~~~la~~~~~~~~l~~~~~~~~g~~~-~------~~l~~~~~~~~~~~~~~~~~spDg~~l~-~~~~~~~~~~~~~~ 159 (662)
T 3azo_A 88 PAGGPLLVFTHFGDQRLYAFEPDAPGGAV-P------RPLTPVSAVGGGLRWADPVLLPERGEVW-CMAEEFTGEGPSDV 159 (662)
T ss_dssp SSSSCEEEEEBTTTCCEEEECTTSTTCCC-C------EECSCCCCSTTCEEEEEEEEETTTTEEE-EEEEEECSSSTTCE
T ss_pred cCCCeEEEEEECCCCeEEEEcCCCCCCCC-C------EeccCCccCCCCccccCcEECCCCCEEE-EEEecccCCCCCCc
Confidence 88884 33333346677777765 2 21 1 12222 567889999999998665 55555
Q ss_pred -CeEEEEECCC------CCCCCCeeEec-ccCCCeeEEEecCCCCeEEEEEeCC--------CcEEEEECCCCC---Ccc
Q 014472 250 -QYLLIWDLRT------PSVSKPVQSVV-AHQSEVNCLAFNPFNEWILATGSTD--------KTVKLFDLRKIS---TAL 310 (424)
Q Consensus 250 -g~i~i~d~~~------~~~~~~~~~~~-~~~~~v~~i~~~~~~~~~l~~g~~d--------g~i~iwd~~~~~---~~~ 310 (424)
..|++||+.+ +. ...+. .+...+..++|+|+|++ |+.++.+ ..|.+||+...+ ...
T Consensus 160 ~~~i~~~~~~~~~~~~~~~----~~~l~~~~~~~~~~~~~SpDG~~-la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~ 234 (662)
T 3azo_A 160 RRFLAAVPLDGSAAADRSA----VRELSDDAHRFVTGPRLSPDGRQ-AVWLAWDHPRMPWEGTELKTARVTEDGRFADTR 234 (662)
T ss_dssp EEEEEEEETTSTTTTCGGG----SEESSCSCSSEECCCEECTTSSE-EEEEEECTTCCTTTCEEEEEEEECTTSCEEEEE
T ss_pred eeEEEEEECCCCccccCCc----eeEEEecCCCcccCceECCCCCE-EEEEECCCCCCCCCCcEEEEEEECCCCcccccE
Confidence 5899999987 33 23444 45567888999999996 5555433 379999998324 333
Q ss_pred eeecCCCCCEEEEEEcCCCCcEEEEEeCCC--eEEEeeCCCCCcccCCCccCCCCCeeeEEEcCCCC--------CcceE
Q 014472 311 HTFDSHKEEVFQVGWNPKNETILASCCLGR--RLMVWDLSRIDEEQTPEDAEDGPPELLFIHGGHTS--------KISDF 380 (424)
Q Consensus 311 ~~~~~~~~~v~~~~~sp~~~~~l~s~~~dg--~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~--------~v~~~ 380 (424)
.....|...+..+.|+|+|+ +++++..++ .|.+||+..+.... ...++.. .+..+
T Consensus 235 ~l~~~~~~~~~~~~~spdg~-l~~~~~~~~~~~l~~~~~~~~~~~~--------------l~~~~~~~~~p~w~~~~~~~ 299 (662)
T 3azo_A 235 TLLGGPEEAIAQAEWAPDGS-LIVATDRTGWWNLHRVDPATGAATQ--------------LCRREEEFAGPLWTPGMRWF 299 (662)
T ss_dssp EEEEETTBCEEEEEECTTSC-EEEEECTTSSCEEEEECTTTCCEEE--------------SSCCSSBSSCCCCSTTCCSE
T ss_pred EeCCCCCceEcceEECCCCe-EEEEECCCCCeEEEEEECCCCceee--------------cccccccccCccccccCceE
Confidence 44445678999999999997 888888888 55556654432111 1111111 15678
Q ss_pred EeCCCCCcEEEEEeCCCcEEEE--ecCCCC
Q 014472 381 SWNPCEDWVISSVAEDNILQIW--QMAENI 408 (424)
Q Consensus 381 ~~~~~~~~~l~s~~~d~~i~iw--~~~~~~ 408 (424)
+|+|++. ++++++. +.++|| ++.++.
T Consensus 300 ~~~~~~~-~~~~~~~-~~~~l~~~d~~~~~ 327 (662)
T 3azo_A 300 APLANGL-IAVVHGK-GAAVLGILDPESGE 327 (662)
T ss_dssp EECTTSC-EEEEEBS-SSCEEEEEETTTTE
T ss_pred eEeCCCE-EEEEEEc-CccEEEEEECCCCc
Confidence 9999998 7888888 999999 544443
No 168
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.70 E-value=3.3e-14 Score=126.88 Aligned_cols=244 Identities=11% Similarity=0.038 Sum_probs=168.4
Q ss_pred ccCCceeEEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCCeeeEEecCCCCceEEEEeCCCc
Q 014472 123 NHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDDAQ 202 (424)
Q Consensus 123 ~h~~~v~~i~~~p~~~~~latg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~ 202 (424)
.+.....+++|+|++..+++++..++.|..|+... . ...+..+...+.++++++++. ++++...++.
T Consensus 25 ~~~~~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~-----------~-~~~~~~~~~~~~~l~~~~dg~-l~v~~~~~~~ 91 (296)
T 3e5z_A 25 DGFTWTEGPVYVPARSAVIFSDVRQNRTWAWSDDG-----------Q-LSPEMHPSHHQNGHCLNKQGH-LIACSHGLRR 91 (296)
T ss_dssp CCCSSEEEEEEEGGGTEEEEEEGGGTEEEEEETTS-----------C-EEEEESSCSSEEEEEECTTCC-EEEEETTTTE
T ss_pred cCCccccCCeEeCCCCEEEEEeCCCCEEEEEECCC-----------C-eEEEECCCCCcceeeECCCCc-EEEEecCCCe
Confidence 45667889999999876888889999999999876 2 455666777899999999887 6666666789
Q ss_pred EEEEeCCCCCCCCcccceeeee-cCCcceeeEEeeCCCCcEEEEE----e-------------CCCeEEEEECCCCCCCC
Q 014472 203 ICLWDINAAPKNKSLEAMQIFK-VHEGVVEDVAWHLRHEYLFGSV----G-------------DDQYLLIWDLRTPSVSK 264 (424)
Q Consensus 203 i~vwd~~~~~~~~~~~~~~~~~-~~~~~v~~i~~~~~~~~~~~s~----~-------------~dg~i~i~d~~~~~~~~ 264 (424)
|.+||..++.... + ..... .....+++++++|++. ++++. + ..+.|..++.. +.
T Consensus 92 i~~~d~~~g~~~~-~--~~~~~~~~~~~~~~i~~d~~G~-l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~--- 163 (296)
T 3e5z_A 92 LERQREPGGEWES-I--ADSFEGKKLNSPNDVCLAPDGS-LWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GT--- 163 (296)
T ss_dssp EEEECSTTCCEEE-E--ECEETTEECCCCCCEEECTTSC-EEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SC---
T ss_pred EEEEcCCCCcEEE-E--eeccCCCCCCCCCCEEECCCCC-EEEECCccccccccccccccccCCCcEEEEECCC-CC---
Confidence 9999987653210 0 00111 1123567899999986 55552 2 13456666654 22
Q ss_pred CeeEecccCCCeeEEEecCCCCeEEEEEeCCCcEEEEECCCCCCc---ceeecCCCCCEEEEEEcCCCCcEEEEEeCCCe
Q 014472 265 PVQSVVAHQSEVNCLAFNPFNEWILATGSTDKTVKLFDLRKISTA---LHTFDSHKEEVFQVGWNPKNETILASCCLGRR 341 (424)
Q Consensus 265 ~~~~~~~~~~~v~~i~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~---~~~~~~~~~~v~~~~~sp~~~~~l~s~~~dg~ 341 (424)
+..+..+....+.++|+|++.. +++.+.++.|.+||+...+.. ...+..+...+.+++++++|. ++++. ++.
T Consensus 164 -~~~~~~~~~~~~gi~~s~dg~~-lv~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~p~~i~~d~~G~-l~v~~--~~~ 238 (296)
T 3e5z_A 164 -LSAPIRDRVKPNGLAFLPSGNL-LVSDTGDNATHRYCLNARGETEYQGVHFTVEPGKTDGLRVDAGGL-IWASA--GDG 238 (296)
T ss_dssp -EEEEECCCSSEEEEEECTTSCE-EEEETTTTEEEEEEECSSSCEEEEEEEECCSSSCCCSEEEBTTSC-EEEEE--TTE
T ss_pred -EEEeecCCCCCccEEECCCCCE-EEEeCCCCeEEEEEECCCCcCcCCCeEeeCCCCCCCeEEECCCCC-EEEEc--CCe
Confidence 3444456667899999999985 478888899999999732333 223333456678899999996 55555 788
Q ss_pred EEEeeCCCCCcccCCCccCCCCCeeeEEEcCCCCCcceEEe-CCCCCcEEEEEeCCCcEEEEecCCCCCC
Q 014472 342 LMVWDLSRIDEEQTPEDAEDGPPELLFIHGGHTSKISDFSW-NPCEDWVISSVAEDNILQIWQMAENIYH 410 (424)
Q Consensus 342 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~-~~~~~~~l~s~~~d~~i~iw~~~~~~~~ 410 (424)
|.+|+... +.+..+..+.. +++++| .|+++. |..++.+ .+.-+++.+..++
T Consensus 239 v~~~~~~g---------------~~~~~~~~~~~-~~~~~f~~~d~~~-L~v~t~~-~l~~~~~~~~~~~ 290 (296)
T 3e5z_A 239 VHVLTPDG---------------DELGRVLTPQT-TSNLCFGGPEGRT-LYMTVST-EFWSIETNVRGLE 290 (296)
T ss_dssp EEEECTTS---------------CEEEEEECSSC-CCEEEEESTTSCE-EEEEETT-EEEEEECSCCBCC
T ss_pred EEEECCCC---------------CEEEEEECCCC-ceeEEEECCCCCE-EEEEcCC-eEEEEEccccccc
Confidence 99999863 44555566666 899999 688884 5555555 4555566665543
No 169
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.70 E-value=1.6e-13 Score=124.46 Aligned_cols=236 Identities=9% Similarity=0.043 Sum_probs=157.4
Q ss_pred eccCCceeEEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCCeeeEEecCCCCceEEEEeCC-
Q 014472 122 INHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDD- 200 (424)
Q Consensus 122 ~~h~~~v~~i~~~p~~~~~latg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~d- 200 (424)
..+...+.+++|+|++. +++++..++.|.+||... .........+...+.+++|++++. ++++...+
T Consensus 41 ~~~~~~~~~~~~~~~g~-l~~~~~~~~~i~~~d~~~----------~~~~~~~~~~~~~~~~i~~~~dg~-l~v~~~~~~ 108 (333)
T 2dg1_A 41 SKKGLQLEGLNFDRQGQ-LFLLDVFEGNIFKINPET----------KEIKRPFVSHKANPAAIKIHKDGR-LFVCYLGDF 108 (333)
T ss_dssp ESSCCCEEEEEECTTSC-EEEEETTTCEEEEECTTT----------CCEEEEEECSSSSEEEEEECTTSC-EEEEECTTS
T ss_pred eccCccccCcEECCCCC-EEEEECCCCEEEEEeCCC----------CcEEEEeeCCCCCcceEEECCCCc-EEEEeCCCC
Confidence 34666789999999886 777888889999999876 122222224667899999999886 66666555
Q ss_pred ---CcEEEEeCCCCCCCCcccceeeeecCCcceeeEEeeCCCCcEEEEEeC------CCeEEEEECCCCCCCCCeeEecc
Q 014472 201 ---AQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGD------DQYLLIWDLRTPSVSKPVQSVVA 271 (424)
Q Consensus 201 ---g~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~~s~~~------dg~i~i~d~~~~~~~~~~~~~~~ 271 (424)
+.|.+||..++.... ......+...+++++++|++. ++++... .+.|..+|..++. +..+..
T Consensus 109 ~~~~~i~~~d~~~~~~~~----~~~~~~~~~~~~~i~~d~~g~-l~v~~~~~~~~~~~~~l~~~~~~~~~----~~~~~~ 179 (333)
T 2dg1_A 109 KSTGGIFAATENGDNLQD----IIEDLSTAYCIDDMVFDSKGG-FYFTDFRGYSTNPLGGVYYVSPDFRT----VTPIIQ 179 (333)
T ss_dssp SSCCEEEEECTTSCSCEE----EECSSSSCCCEEEEEECTTSC-EEEEECCCBTTBCCEEEEEECTTSCC----EEEEEE
T ss_pred CCCceEEEEeCCCCEEEE----EEccCccCCcccceEECCCCC-EEEEeccccccCCCceEEEEeCCCCE----EEEeec
Confidence 689999987653210 100012345789999999986 5545443 3566666665433 223323
Q ss_pred cCCCeeEEEecCCCCeEEEEEeCCCcEEEEECCCCCCccee--------ecCCCCCEEEEEEcCCCCcEEEEEeCCCeEE
Q 014472 272 HQSEVNCLAFNPFNEWILATGSTDKTVKLFDLRKISTALHT--------FDSHKEEVFQVGWNPKNETILASCCLGRRLM 343 (424)
Q Consensus 272 ~~~~v~~i~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~--------~~~~~~~v~~~~~sp~~~~~l~s~~~dg~i~ 343 (424)
....+..++|+|++..++++.+.++.|.+||++..+..+.. +..+ ..+..+++++++. ++++...++.|.
T Consensus 180 ~~~~~~~i~~~~dg~~l~v~~~~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~-~~~~~i~~d~~G~-l~v~~~~~~~v~ 257 (333)
T 2dg1_A 180 NISVANGIALSTDEKVLWVTETTANRLHRIALEDDGVTIQPFGATIPYYFTGH-EGPDSCCIDSDDN-LYVAMYGQGRVL 257 (333)
T ss_dssp EESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSSSEEEEEEEEEEECCSS-SEEEEEEEBTTCC-EEEEEETTTEEE
T ss_pred CCCcccceEECCCCCEEEEEeCCCCeEEEEEecCCCcCcccccceEEEecCCC-CCCCceEECCCCC-EEEEEcCCCEEE
Confidence 34468899999999866666667889999999742332221 1222 4678899999985 677777788999
Q ss_pred EeeCCCCCcccCCCccCCCCCeeeEEEcCC------CCCcceEEeCCCCCcEEEEEeC
Q 014472 344 VWDLSRIDEEQTPEDAEDGPPELLFIHGGH------TSKISDFSWNPCEDWVISSVAE 395 (424)
Q Consensus 344 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h------~~~v~~~~~~~~~~~~l~s~~~ 395 (424)
+||... ..+..+..+ ...+.+++|+|++..+++++..
T Consensus 258 ~~d~~g---------------~~~~~~~~~~~~~g~~~~~~~~~~~~dg~~L~v~~~~ 300 (333)
T 2dg1_A 258 VFNKRG---------------YPIGQILIPGRDEGHMLRSTHPQFIPGTNQLIICSND 300 (333)
T ss_dssp EECTTS---------------CEEEEEECTTGGGTCSCBCCEEEECTTSCEEEEEEEC
T ss_pred EECCCC---------------CEEEEEEcCCCccccccCcceEEECCCCCEEEEEeCc
Confidence 999842 222233222 2368999999998755556554
No 170
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.69 E-value=5e-15 Score=136.40 Aligned_cols=209 Identities=11% Similarity=0.076 Sum_probs=135.6
Q ss_pred CceeEEEecCCCCc-EEEEEe-------------cCCeEEEEeCCCCCCCCCCCCCCCCcEEEe----cCCCCeeeEEec
Q 014472 126 GEVNRARYMPQNPF-LIATKT-------------VSAEVYVFDYSKHPSKPPLDGACSPDLRLR----GHSTEGYGLSWS 187 (424)
Q Consensus 126 ~~v~~i~~~p~~~~-~latg~-------------~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~----~h~~~v~~l~~~ 187 (424)
+.+.+++|+|+++. +++++. .+|.+.+|++... ......+. .+...+.+++|+
T Consensus 83 g~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~~~---------g~~~~~~~~~~~~~~~~~~~~~~s 153 (365)
T 1jof_A 83 GHPRANDADTNTRAIFLLAAKQPPYAVYANPFYKFAGYGNVFSVSET---------GKLEKNVQNYEYQENTGIHGMVFD 153 (365)
T ss_dssp SSGGGGCTTSCCEEEEEEECSSTTCCEEEEEESSSCCEEEEEEECTT---------CCEEEEEEEEECCTTCCEEEEEEC
T ss_pred CCCccEEECCCCCEEEEEEecCCcceeccceeecCCceEEEEccCCC---------CcCcceEeeEEeCCCCcceEEEEC
Confidence 34677999999974 344543 6899999999741 11111222 245678999999
Q ss_pred CCCCceEEEEe-CCCcEEEEeCC-CCCCCCcccceeeee--cCCcceeeEEeeCCCCcEEEEEeCCCeEEEEECCC--CC
Q 014472 188 KFKEGHLLSGS-DDAQICLWDIN-AAPKNKSLEAMQIFK--VHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRT--PS 261 (424)
Q Consensus 188 ~~~~~~l~s~~-~dg~i~vwd~~-~~~~~~~~~~~~~~~--~~~~~v~~i~~~~~~~~~~~s~~~dg~i~i~d~~~--~~ 261 (424)
|+++ +|++++ .++.|.+|++. ++. +..+..+. .|...+..++|+|+++.++++...++.|.+|++.. ++
T Consensus 154 pdG~-~l~~~~~~~~~v~~~~~~~~g~----~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~ 228 (365)
T 1jof_A 154 PTET-YLYSADLTANKLWTHRKLASGE----VELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAGNRICEYVIDPATHM 228 (365)
T ss_dssp TTSS-EEEEEETTTTEEEEEEECTTSC----EEEEEEEECSSTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTTCC
T ss_pred CCCC-EEEEEcCCCCEEEEEEECCCCC----EEEeeeEecCCCCCCCCEeEECCCCCEEEEEECCCCeEEEEEEeCCCCc
Confidence 9998 566655 46899999997 442 12222232 24567899999999987765555688999998753 32
Q ss_pred CCC---CeeEec----ccCC------CeeEEE-ecCCCCeEEEEEeCCC-----cEEEEECCCCCCcce---eecCCCCC
Q 014472 262 VSK---PVQSVV----AHQS------EVNCLA-FNPFNEWILATGSTDK-----TVKLFDLRKISTALH---TFDSHKEE 319 (424)
Q Consensus 262 ~~~---~~~~~~----~~~~------~v~~i~-~~~~~~~~l~~g~~dg-----~i~iwd~~~~~~~~~---~~~~~~~~ 319 (424)
... .+..+. +|.. .+..++ |+|+|++++++...+. .|.+|++...+.... ....+...
T Consensus 229 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~~~~~~~~~~~i~v~~~~~~g~~~~~~~~~~~~~~~ 308 (365)
T 1jof_A 229 PVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFASSRANKFELQGYIAGFKLRDCGSIEKQLFLSPTPTSG 308 (365)
T ss_dssp EEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEECTTSCEEEEEEEEECSSCC
T ss_pred EEEccceEEcCCCCcCCcccccccccccccEEEECCCCCEEEEECCCCCCCCCCeEEEEEECCCCCEEEeeeeeecCCCC
Confidence 100 011111 1122 488999 9999996544433333 899999963244332 23334556
Q ss_pred EEEEEEcC---CCCcEEEEEeC-CCeEEEeeCCC
Q 014472 320 VFQVGWNP---KNETILASCCL-GRRLMVWDLSR 349 (424)
Q Consensus 320 v~~~~~sp---~~~~~l~s~~~-dg~i~iwd~~~ 349 (424)
+..++|+| +++ +|++++. ++.|.+|++..
T Consensus 309 ~~~~a~sp~~~dg~-~l~v~~~~~~~v~v~~~~~ 341 (365)
T 1jof_A 309 GHSNAVSPCPWSDE-WMAITDDQEGWLEIYRWKD 341 (365)
T ss_dssp TTCCCEEECTTCTT-EEEEECSSSCEEEEEEEET
T ss_pred cccceecCCCcCCC-EEEEEEcCCCeEEEEEEch
Confidence 77899999 786 5666665 58999999865
No 171
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.68 E-value=5e-14 Score=123.77 Aligned_cols=240 Identities=5% Similarity=-0.021 Sum_probs=164.8
Q ss_pred ceeEEEecCCCCcEEE-EEecCCeEEEEeCCCCCCCCCCCCCCCCcEEE-ecCCCCeeeEEecCCCCceEEEEeCCCcEE
Q 014472 127 EVNRARYMPQNPFLIA-TKTVSAEVYVFDYSKHPSKPPLDGACSPDLRL-RGHSTEGYGLSWSKFKEGHLLSGSDDAQIC 204 (424)
Q Consensus 127 ~v~~i~~~p~~~~~la-tg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~-~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~ 204 (424)
...++++.|++. +++ +...++.|.+|+.... . ...+ ..+...+.++++.+++. ++++.. ++.|.
T Consensus 25 ~p~~i~~~~~g~-l~v~~~~~~~~i~~~~~~~~----------~-~~~~~~~~~~~p~~i~~~~~g~-l~v~~~-~~~i~ 90 (270)
T 1rwi_B 25 SPSGVAVDSAGN-VYVTSEGMYGRVVKLATGST----------G-TTVLPFNGLYQPQGLAVDGAGT-VYVTDF-NNRVV 90 (270)
T ss_dssp CEEEEEECTTCC-EEEEECSSSCEEEEECC----------------EECCCCSCCSCCCEEECTTCC-EEEEET-TTEEE
T ss_pred CccceEECCCCC-EEEEccCCCCcEEEecCCCc----------c-cceEeeCCcCCcceeEECCCCC-EEEEcC-CCEEE
Confidence 677899999886 666 5567889999987541 1 1111 22335678999999876 555555 88999
Q ss_pred EEeCCCCCCCCcccceeeee-cCCcceeeEEeeCCCCcEEEEEeCCCeEEEEECCCCCCCCCeeEecccCCCeeEEEecC
Q 014472 205 LWDINAAPKNKSLEAMQIFK-VHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNP 283 (424)
Q Consensus 205 vwd~~~~~~~~~~~~~~~~~-~~~~~v~~i~~~~~~~~~~~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~~ 283 (424)
+||...... ..+. .....+..+++++++. ++++...++.|.+|+..+... ..........+..+++++
T Consensus 91 ~~d~~~~~~-------~~~~~~~~~~p~~i~~~~~g~-l~v~~~~~~~i~~~~~~~~~~---~~~~~~~~~~p~~i~~~~ 159 (270)
T 1rwi_B 91 TLAAGSNNQ-------TVLPFDGLNYPEGLAVDTQGA-VYVADRGNNRVVKLAAGSKTQ---TVLPFTGLNDPDGVAVDN 159 (270)
T ss_dssp EECTTCSCC-------EECCCCSCSSEEEEEECTTCC-EEEEEGGGTEEEEECTTCCSC---EECCCCSCCSCCCEEECT
T ss_pred EEeCCCceE-------eeeecCCcCCCcceEECCCCC-EEEEECCCCEEEEEECCCcee---EeeccccCCCceeEEEeC
Confidence 999865421 1111 2235688999999886 776777788999997654332 211122334678999999
Q ss_pred CCCeEEEEEeCCCcEEEEECCCCCCcceeecCCCCCEEEEEEcCCCCcEEEEEeCCCeEEEeeCCCCCcccCCCccCCCC
Q 014472 284 FNEWILATGSTDKTVKLFDLRKISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPEDAEDGP 363 (424)
Q Consensus 284 ~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~ 363 (424)
++. ++++...++.|.+||... .........+...+.++++++++ .++++...++.|.+|+......
T Consensus 160 ~g~-l~v~~~~~~~i~~~~~~~-~~~~~~~~~~~~~p~~i~~d~~g-~l~v~~~~~~~v~~~~~~~~~~----------- 225 (270)
T 1rwi_B 160 SGN-VYVTDTDNNRVVKLEAES-NNQVVLPFTDITAPWGIAVDEAG-TVYVTEHNTNQVVKLLAGSTTS----------- 225 (270)
T ss_dssp TCC-EEEEEGGGTEEEEECTTT-CCEEECCCSSCCSEEEEEECTTC-CEEEEETTTSCEEEECTTCSCC-----------
T ss_pred CCC-EEEEECCCCEEEEEecCC-CceEeecccCCCCceEEEECCCC-CEEEEECCCCcEEEEcCCCCcc-----------
Confidence 887 677777788999999876 33222222333678999999998 5777777788999999865321
Q ss_pred CeeeEEEcCCCCCcceEEeCCCCCcEEEEEeCCCcEEEEecCCCCC
Q 014472 364 PELLFIHGGHTSKISDFSWNPCEDWVISSVAEDNILQIWQMAENIY 409 (424)
Q Consensus 364 ~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~ 409 (424)
......+...+.+++++++|. ++++...++.|+++++.....
T Consensus 226 ---~~~~~~~~~~p~~i~~~~~g~-l~v~~~~~~~v~~~~~~~~~~ 267 (270)
T 1rwi_B 226 ---TVLPFTGLNTPLAVAVDSDRT-VYVADRGNDRVVKLTSLEHHH 267 (270)
T ss_dssp ---EECCCCSCSCEEEEEECTTCC-EEEEEGGGTEEEEECCCGGGS
T ss_pred ---eeeccCCCCCceeEEECCCCC-EEEEECCCCEEEEEcCCCccc
Confidence 111112334688999999998 888888999999999987654
No 172
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.68 E-value=3.1e-15 Score=139.06 Aligned_cols=241 Identities=10% Similarity=0.118 Sum_probs=150.7
Q ss_pred CceeEEEecCCCCcEEEEEecC--CeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCCe-eeEEecCCCCceEEEEeCCCc
Q 014472 126 GEVNRARYMPQNPFLIATKTVS--AEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEG-YGLSWSKFKEGHLLSGSDDAQ 202 (424)
Q Consensus 126 ~~v~~i~~~p~~~~~latg~~d--g~v~iwd~~~~~~~~~~~~~~~~~~~~~~h~~~v-~~l~~~~~~~~~l~s~~~dg~ 202 (424)
..+..++|+|+++.++++...+ ..|.+|++.. .. ...+..+.... ..+.|+|++. .|+.++.++.
T Consensus 36 ~~~~~~~~SpdG~~l~~~~~~~g~~~l~~~d~~~----------~~-~~~l~~~~~~~~~~~~~spdg~-~l~~~~~~~~ 103 (396)
T 3c5m_A 36 NYFYQKCFTQDGKKLLFAGDFDGNRNYYLLNLET----------QQ-AVQLTEGKGDNTFGGFISTDER-AFFYVKNELN 103 (396)
T ss_dssp CCTTSCCBCTTSCEEEEEECTTSSCEEEEEETTT----------TE-EEECCCSSCBCTTTCEECTTSS-EEEEEETTTE
T ss_pred eeeecCcCCCCCCEEEEEEecCCCceEEEEECCC----------Cc-EEEeecCCCCccccceECCCCC-EEEEEEcCCc
Confidence 3477899999998545544433 3688888776 11 22333333333 3488999998 6888888889
Q ss_pred EEEEeCCCCCCCCcccceeeeecCCcceee-------------------EEeeCCCCcEEEEE----eCCCeEEEEECCC
Q 014472 203 ICLWDINAAPKNKSLEAMQIFKVHEGVVED-------------------VAWHLRHEYLFGSV----GDDQYLLIWDLRT 259 (424)
Q Consensus 203 i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~-------------------i~~~~~~~~~~~s~----~~dg~i~i~d~~~ 259 (424)
|.+||+.++.. ......+...... +.|+|+++.+++.. ..+..|.+||+.+
T Consensus 104 l~~~d~~~~~~------~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~~~~l~~~d~~~ 177 (396)
T 3c5m_A 104 LMKVDLETLEE------QVIYTVDEEWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHTNPTCRLIKVDIET 177 (396)
T ss_dssp EEEEETTTCCE------EEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHHTCCCEEEEEEETTT
T ss_pred EEEEECCCCCc------EEEEecccccCCCCCEEEeccCCccccccccccccCCCCcceeeeeeccCCCcceEEEEECCC
Confidence 99999977632 1112212222222 35677776543222 4567899999987
Q ss_pred CCCCCCeeEecccCCCeeEEEecC-CCCeEEEEEeCC------CcEEEEECCCCCCcceeecCC--CCCEEEEEEcCCCC
Q 014472 260 PSVSKPVQSVVAHQSEVNCLAFNP-FNEWILATGSTD------KTVKLFDLRKISTALHTFDSH--KEEVFQVGWNPKNE 330 (424)
Q Consensus 260 ~~~~~~~~~~~~~~~~v~~i~~~~-~~~~~l~~g~~d------g~i~iwd~~~~~~~~~~~~~~--~~~v~~~~~sp~~~ 330 (424)
++ ...+..+...+..+.|+| ++.. |+..+.+ ..|.+||+.. +. ...+..+ ...+..++|+|+++
T Consensus 178 g~----~~~~~~~~~~~~~~~~sp~dg~~-l~~~~~~~~~~~~~~l~~~d~~~-~~-~~~l~~~~~~~~~~~~~~spdg~ 250 (396)
T 3c5m_A 178 GE----LEVIHQDTAWLGHPIYRPFDDST-VGFCHEGPHDLVDARMWLVNEDG-SN-VRKIKEHAEGESCTHEFWIPDGS 250 (396)
T ss_dssp CC----EEEEEEESSCEEEEEEETTEEEE-EEEEECSCSSSCSCCCEEEETTS-CC-CEESSCCCTTEEEEEEEECTTSS
T ss_pred Cc----EEeeccCCcccccceECCCCCCE-EEEEecCCCCCCCceEEEEECCC-Cc-eeEeeccCCCccccceEECCCCC
Confidence 65 233335677899999999 6764 4444433 3688888865 33 2333333 23588899999997
Q ss_pred cEEEEEeCC----CeEEEeeCCCCCcccCCCccCCCCCeeeEEEcCCCCCcceEEeCC-CCCcEEEEEe-----------
Q 014472 331 TILASCCLG----RRLMVWDLSRIDEEQTPEDAEDGPPELLFIHGGHTSKISDFSWNP-CEDWVISSVA----------- 394 (424)
Q Consensus 331 ~~l~s~~~d----g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~-~~~~~l~s~~----------- 394 (424)
.+++++..+ +.|.+||+.++.. ..+....+ .. +.|+| +++ ++++++
T Consensus 251 ~l~~~~~~~~~~~~~l~~~d~~~g~~------------~~l~~~~~----~~-~~~s~~dg~-~l~~~~~~~p~~~~~~~ 312 (396)
T 3c5m_A 251 AMAYVSYFKGQTDRVIYKANPETLEN------------EEVMVMPP----CS-HLMSNFDGS-LMVGDGCDAPVDVADAD 312 (396)
T ss_dssp CEEEEEEETTTCCEEEEEECTTTCCE------------EEEEECCS----EE-EEEECSSSS-EEEEEECCC--------
T ss_pred EEEEEecCCCCccceEEEEECCCCCe------------EEeeeCCC----CC-CCccCCCCc-eEEEecCCcceeecccc
Confidence 654444332 4499999976432 22222222 22 89999 999 565543
Q ss_pred -----CCCcEEEEecCCCCC
Q 014472 395 -----EDNILQIWQMAENIY 409 (424)
Q Consensus 395 -----~d~~i~iw~~~~~~~ 409 (424)
.++.|++|++.++..
T Consensus 313 ~~~~~~~~~i~~~d~~~~~~ 332 (396)
T 3c5m_A 313 SYNIENDPFLYVLNTKAKSA 332 (396)
T ss_dssp --CCCCCCEEEEEETTTTBC
T ss_pred ccccCCCCcEEEEecccCce
Confidence 347899999987754
No 173
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.67 E-value=5.8e-14 Score=140.87 Aligned_cols=252 Identities=9% Similarity=0.022 Sum_probs=165.3
Q ss_pred cCCceeEEEecCCCCcEEEEEec-CC----eEEEEeCCCCCCCCCCCCCCCCcEEEecCCCCeeeEEecCCCCceEEEEe
Q 014472 124 HDGEVNRARYMPQNPFLIATKTV-SA----EVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGS 198 (424)
Q Consensus 124 h~~~v~~i~~~p~~~~~latg~~-dg----~v~iwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~ 198 (424)
|...+..++|+|+++ +||.+.. .| .|++||+.+ + ....... ....+.+++|+|++. .|+.++
T Consensus 123 ~~~~~~~~~~SPDg~-~la~~~~~~G~~~~~i~v~d~~t--------g--~~~~~~~-~~~~~~~~~wspDg~-~l~~~~ 189 (710)
T 2xdw_A 123 GTVALRGYAFSEDGE-YFAYGLSASGSDWVTIKFMKVDG--------A--KELPDVL-ERVKFSCMAWTHDGK-GMFYNA 189 (710)
T ss_dssp SCEEEEEEEECTTSS-EEEEEEEETTCSCEEEEEEETTT--------T--EEEEEEE-EEECSCCEEECTTSS-EEEEEE
T ss_pred CCEEEEEEEECCCCC-EEEEEEcCCCCceEEEEEEECCC--------C--CCCcccc-cCcccceEEEEeCCC-EEEEEE
Confidence 334678899999998 5554443 33 899999987 2 2222111 122367899999998 577777
Q ss_pred CCCc----------------EEEEeCCCCCCCCcccceeeeecCCcceeeEEeeCCCCcEEEEEeC----CCeEEEEECC
Q 014472 199 DDAQ----------------ICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGD----DQYLLIWDLR 258 (424)
Q Consensus 199 ~dg~----------------i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~~s~~~----dg~i~i~d~~ 258 (424)
.++. |++|++.++.... ..+.....|...+..+.|+|+++.++.+... +..|++||+.
T Consensus 190 ~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~--~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~ 267 (710)
T 2xdw_A 190 YPQQDGKSDGTETSTNLHQKLYYHVLGTDQSED--ILCAEFPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQ 267 (710)
T ss_dssp CCCCSSCCSSSCCCCCCCCEEEEEETTSCGGGC--EEEECCTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGG
T ss_pred ECCccccccccccccCCCCEEEEEECCCCcccc--eEEeccCCCCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECc
Confidence 6655 9999997653211 0111112245567899999999977655542 5689999997
Q ss_pred C------CCCCCCeeEecccCCCeeEEEecCCCCeEEEEEeCC---CcEEEEECCCCCC-cceeecCCCC--CEEEEEEc
Q 014472 259 T------PSVSKPVQSVVAHQSEVNCLAFNPFNEWILATGSTD---KTVKLFDLRKIST-ALHTFDSHKE--EVFQVGWN 326 (424)
Q Consensus 259 ~------~~~~~~~~~~~~~~~~v~~i~~~~~~~~~l~~g~~d---g~i~iwd~~~~~~-~~~~~~~~~~--~v~~~~~s 326 (424)
+ +.. .+..+..+...+.. .|+|+|..+++.+..+ +.|.+||+.+... ....+..|.. .+..++|+
T Consensus 268 ~~~~~~~~~~--~~~~l~~~~~~~~~-~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~ 344 (710)
T 2xdw_A 268 QESNGITGIL--KWVKLIDNFEGEYD-YVTNEGTVFTFKTNRHSPNYRLINIDFTDPEESKWKVLVPEHEKDVLEWVACV 344 (710)
T ss_dssp GSSSSSCSSC--CCEEEECSSSSCEE-EEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCEEEEEEEE
T ss_pred ccccccCCcc--ceEEeeCCCCcEEE-EEeccCCEEEEEECCCCCCCEEEEEeCCCCCcccceeccCCCCCCeEEEEEEE
Confidence 6 321 24445555555554 4788888766555543 3699999987431 2345555544 68889999
Q ss_pred CCCCcEEEEEeCCCe--EEEeeCCCCCcccCCCccCCCCCeeeEEEcCCCCCcceEEeCCCCCcEEEEEe---CCCcEEE
Q 014472 327 PKNETILASCCLGRR--LMVWDLSRIDEEQTPEDAEDGPPELLFIHGGHTSKISDFSWNPCEDWVISSVA---EDNILQI 401 (424)
Q Consensus 327 p~~~~~l~s~~~dg~--i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~---~d~~i~i 401 (424)
+++ .++++...++. |.+|++..+ ..+..+..+...+..++++|+++.++++.+ ..+.|.+
T Consensus 345 ~~~-~lv~~~~~~g~~~l~~~~~~~g--------------~~~~~l~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~ 409 (710)
T 2xdw_A 345 RSN-FLVLCYLHDVKNTLQLHDLATG--------------ALLKIFPLEVGSVVGYSGQKKDTEIFYQFTSFLSPGIIYH 409 (710)
T ss_dssp TTT-EEEEEEEETTEEEEEEEETTTC--------------CEEEEECCCSSEEEEEECCTTCSEEEEEEECSSCCCEEEE
T ss_pred cCC-EEEEEEEECCEEEEEEEECCCC--------------CEEEecCCCCceEEEEecCCCCCEEEEEEeCCCCCCEEEE
Confidence 665 58888888885 455666443 233445556677889999999875555544 3578999
Q ss_pred EecCCCC
Q 014472 402 WQMAENI 408 (424)
Q Consensus 402 w~~~~~~ 408 (424)
||+.++.
T Consensus 410 ~d~~tg~ 416 (710)
T 2xdw_A 410 CDLTKEE 416 (710)
T ss_dssp EETTSSS
T ss_pred EECCCCc
Confidence 9998765
No 174
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.66 E-value=1.7e-14 Score=132.43 Aligned_cols=220 Identities=9% Similarity=0.046 Sum_probs=139.1
Q ss_pred cCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCCeeeEEecCCCCceEEEEe----------CCCcEEEEeCCCCCCCC
Q 014472 146 VSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGS----------DDAQICLWDINAAPKNK 215 (424)
Q Consensus 146 ~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~----------~dg~i~vwd~~~~~~~~ 215 (424)
.|+.|++||..+ .+....+..+..+ .++|+|++. +|++++ .++.|.+||+.+.+.
T Consensus 29 ~d~~v~v~D~~t----------~~~~~~i~~g~~p--~i~~spdg~-~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~-- 93 (361)
T 2oiz_A 29 TESRVHVYDYTN----------GKFLGMVPTAFNG--HVQVSNDGK-KIYTMTTYHERITRGKRSDVVEVWDADKLTF-- 93 (361)
T ss_dssp GGCEEEEEETTT----------CCEEEEEECCEEE--EEEECTTSS-EEEEEEEEETTSSSSCEEEEEEEEETTTCCE--
T ss_pred ccCeEEEEECCC----------CeEEEEecCCCCC--ceEECCCCC-EEEEEEecccccccCCCCCEEEEEECcCCcE--
Confidence 367999999876 3344556555444 899999998 566665 367899999876532
Q ss_pred cccceeeeec------CCcceeeEEeeCCCCcEEEEEeC-CCeEEEEECCCCCCCCCeeE-ecccCCCeeEEEecCCCCe
Q 014472 216 SLEAMQIFKV------HEGVVEDVAWHLRHEYLFGSVGD-DQYLLIWDLRTPSVSKPVQS-VVAHQSEVNCLAFNPFNEW 287 (424)
Q Consensus 216 ~~~~~~~~~~------~~~~v~~i~~~~~~~~~~~s~~~-dg~i~i~d~~~~~~~~~~~~-~~~~~~~v~~i~~~~~~~~ 287 (424)
+..+.. +......++++|++++++++... ++.|.+||+.+.+. +.. +. ... ...+.+.|.+..
T Consensus 94 ----~~~i~~~~~~~~~g~~p~~i~~spdg~~l~v~n~~~~~~v~v~d~~~~~~---~~~~i~-~~~-~~~v~~~p~~~~ 164 (361)
T 2oiz_A 94 ----EKEISLPPKRVQGLNYDGLFRQTTDGKFIVLQNASPATSIGIVDVAKGDY---VEDVTA-AAG-CWSVIPQPNRPR 164 (361)
T ss_dssp ----EEEEEECTTBCCBCCCGGGEEECTTSSEEEEEEESSSEEEEEEETTTTEE---EEEEGG-GTT-EEEEEECTTSSS
T ss_pred ----EEEEEcCccccccCCCcceEEECCCCCEEEEECCCCCCeEEEEECCCCcE---EEEEec-CCC-cceeEEcCCCCe
Confidence 222221 23457789999999988766544 68999999998653 333 22 111 122344454433
Q ss_pred EEEEEeCCCcEEEEECCCCCCcc-------------------------------------------------eeecCC--
Q 014472 288 ILATGSTDKTVKLFDLRKISTAL-------------------------------------------------HTFDSH-- 316 (424)
Q Consensus 288 ~l~~g~~dg~i~iwd~~~~~~~~-------------------------------------------------~~~~~~-- 316 (424)
.+++.+.||.+.+|++...++.. ..+...
T Consensus 165 ~~~~~~~dg~~~~v~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~ 244 (361)
T 2oiz_A 165 SFMTICGDGGLLTINLGEDGKVASQSRSKQMFSVKDDPIFIAPALDKDKAHFVSYYGNVYSADFSGDEVKVDGPWSLLND 244 (361)
T ss_dssp EEEEEETTSSEEEEEECTTSSEEEEEECCCCSCTTTSCBCSCCEECSSEEEEEBTTSEEEEEECSSSSCEEEEEEESCCH
T ss_pred eEEEECCCCcEEEEEECCCCcEeeeccccceEcCCCCceEEEecccCCEEEEEeCCCeEEEEEecCCCceecccccccCc
Confidence 45555555555555543211111 000000
Q ss_pred --------CCCEEEEEEcCCCCcEEEEEeC----------CCeEEEeeCCCCCcccCCCccCCCCCeeeEEEcCCCCCcc
Q 014472 317 --------KEEVFQVGWNPKNETILASCCL----------GRRLMVWDLSRIDEEQTPEDAEDGPPELLFIHGGHTSKIS 378 (424)
Q Consensus 317 --------~~~v~~~~~sp~~~~~l~s~~~----------dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~ 378 (424)
......++|+|++..++++... .+.|.+||+.+. +.+..+..+. +.
T Consensus 245 ~~~~~~~~p~g~~~~a~~~dg~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~--------------~~v~~i~~~~--p~ 308 (361)
T 2oiz_A 245 EDKAKNWVPGGYNLVGLHRASGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTK--------------QRVARIPGRD--AL 308 (361)
T ss_dssp HHHHTTCEECCSSCEEEETTTTEEEEEEESSCCTTCTTCCCSEEEEEETTTT--------------EEEEEEECTT--CC
T ss_pred cccccccccCCeeEEEEecCCCeEEEEEccCCCcccccCCCceEEEEECCCC--------------cEEEEEecCC--ee
Confidence 0001126888988766655541 347999999875 5566666665 89
Q ss_pred eEEeCCCCCcEEEEEeCCCcEEEEecCCC
Q 014472 379 DFSWNPCEDWVISSVAEDNILQIWQMAEN 407 (424)
Q Consensus 379 ~~~~~~~~~~~l~s~~~d~~i~iw~~~~~ 407 (424)
+++|+|+|+ +|++++. +.|.+||+.++
T Consensus 309 ~ia~spdg~-~l~v~n~-~~v~v~D~~t~ 335 (361)
T 2oiz_A 309 SMTIDQQRN-LMLTLDG-GNVNVYDISQP 335 (361)
T ss_dssp EEEEETTTT-EEEEECS-SCEEEEECSSS
T ss_pred EEEECCCCC-EEEEeCC-CeEEEEECCCC
Confidence 999999999 5666666 99999999988
No 175
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.66 E-value=8.4e-15 Score=145.90 Aligned_cols=251 Identities=7% Similarity=-0.057 Sum_probs=150.1
Q ss_pred EEEec--CCCCc-EEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEec-----CCCCeeeEEecCCCCceEEEEeCC-
Q 014472 130 RARYM--PQNPF-LIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRG-----HSTEGYGLSWSKFKEGHLLSGSDD- 200 (424)
Q Consensus 130 ~i~~~--p~~~~-~latg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~-----h~~~v~~l~~~~~~~~~l~s~~~d- 200 (424)
..+|+ |+++. ++++...+..|+++++.... ......+.. |...+.+++|+|+++ .|++++.+
T Consensus 81 ~~~~~~SPDg~~~la~~~~~~~~l~~~~~~~~g--------~~~~~~l~~~~~~~~~~~~~~~~~spDg~-~l~~~~~~~ 151 (662)
T 3azo_A 81 PWAGVPRPAGGPLLVFTHFGDQRLYAFEPDAPG--------GAVPRPLTPVSAVGGGLRWADPVLLPERG-EVWCMAEEF 151 (662)
T ss_dssp CEEEECCSSSSCEEEEEBTTTCCEEEECTTSTT--------CCCCEECSCCCCSTTCEEEEEEEEETTTT-EEEEEEEEE
T ss_pred cceeeeecCCCeEEEEEECCCCeEEEEcCCCCC--------CCCCEeccCCccCCCCccccCcEECCCCC-EEEEEEecc
Confidence 45555 99986 44443345667777665000 011234444 566788999999998 57777766
Q ss_pred ---------CcEEEEeCCCCCCCCcccceeeee-cCCcceeeEEeeCCCCcEEEEEeCC-------CeEEEEECC-CCCC
Q 014472 201 ---------AQICLWDINAAPKNKSLEAMQIFK-VHEGVVEDVAWHLRHEYLFGSVGDD-------QYLLIWDLR-TPSV 262 (424)
Q Consensus 201 ---------g~i~vwd~~~~~~~~~~~~~~~~~-~~~~~v~~i~~~~~~~~~~~s~~~d-------g~i~i~d~~-~~~~ 262 (424)
..|.+||+.+..... ......+. .+...+..++|+|+|+.++.+.... ..|++||+. ++..
T Consensus 152 ~~~~~~~~~~~i~~~~~~~~~~~~-~~~~~~l~~~~~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~ 230 (662)
T 3azo_A 152 TGEGPSDVRRFLAAVPLDGSAAAD-RSAVRELSDDAHRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRF 230 (662)
T ss_dssp CSSSTTCEEEEEEEEETTSTTTTC-GGGSEESSCSCSSEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCE
T ss_pred cCCCCCCceeEEEEEECCCCcccc-CCceeEEEecCCCcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcc
Confidence 589999997621000 00112233 4556788999999998665343332 479999998 4421
Q ss_pred CCCeeEecccCCCeeEEEecCCCCeEEEEEeCCC--cEEEEECCCCCCcceeecCCCCC--------EEEEEEcCCCCcE
Q 014472 263 SKPVQSVVAHQSEVNCLAFNPFNEWILATGSTDK--TVKLFDLRKISTALHTFDSHKEE--------VFQVGWNPKNETI 332 (424)
Q Consensus 263 ~~~~~~~~~~~~~v~~i~~~~~~~~~l~~g~~dg--~i~iwd~~~~~~~~~~~~~~~~~--------v~~~~~sp~~~~~ 332 (424)
.........+...+..++|+|+|+ +++++..++ .|.+||+.. +........+... +..++|+|++. +
T Consensus 231 ~~~~~l~~~~~~~~~~~~~spdg~-l~~~~~~~~~~~l~~~~~~~-~~~~~l~~~~~~~~~p~w~~~~~~~~~~~~~~-~ 307 (662)
T 3azo_A 231 ADTRTLLGGPEEAIAQAEWAPDGS-LIVATDRTGWWNLHRVDPAT-GAATQLCRREEEFAGPLWTPGMRWFAPLANGL-I 307 (662)
T ss_dssp EEEEEEEEETTBCEEEEEECTTSC-EEEEECTTSSCEEEEECTTT-CCEEESSCCSSBSSCCCCSTTCCSEEECTTSC-E
T ss_pred cccEEeCCCCCceEcceEECCCCe-EEEEECCCCCeEEEEEECCC-CceeecccccccccCccccccCceEeEeCCCE-E
Confidence 011222234567899999999998 788888888 566666544 3332222222221 56788999885 7
Q ss_pred EEEEeCCCeEEEeeCCCCCcccCCCccCCCCCeeeEEEcCCCCCcceEEeCCCCCcE-EEEEeCCCc--EEEEecCCCC
Q 014472 333 LASCCLGRRLMVWDLSRIDEEQTPEDAEDGPPELLFIHGGHTSKISDFSWNPCEDWV-ISSVAEDNI--LQIWQMAENI 408 (424)
Q Consensus 333 l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~-l~s~~~d~~--i~iw~~~~~~ 408 (424)
+++++. +.++||.+.... ..+..+..|...+..+ |++++..+ +++++.+.. |.+|++.++.
T Consensus 308 ~~~~~~-~~~~l~~~d~~~-------------~~~~~l~~~~~~~~~~-~s~~~~~~~~~~~~~~~~~~i~~~d~~~g~ 371 (662)
T 3azo_A 308 AVVHGK-GAAVLGILDPES-------------GELVDAAGPWTEWAAT-LTVSGTRAVGVAASPRTAYEVVELDTVTGR 371 (662)
T ss_dssp EEEEBS-SSCEEEEEETTT-------------TEEEECCSSCCEEEEE-EEEETTEEEEEEEETTEEEEEEEEETTTCC
T ss_pred EEEEEc-CccEEEEEECCC-------------CcEEEecCCCCeEEEE-EecCCCEEEEEEcCCCCCCEEEEEECCCCc
Confidence 888888 999999543211 1134455666666666 13444433 444455544 5555655553
No 176
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.65 E-value=4.2e-14 Score=142.55 Aligned_cols=204 Identities=9% Similarity=0.053 Sum_probs=129.0
Q ss_pred eEEEecCCCCcEEEEEecC---------CeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCCeeeEEecCCCCceEEEEeC
Q 014472 129 NRARYMPQNPFLIATKTVS---------AEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSD 199 (424)
Q Consensus 129 ~~i~~~p~~~~~latg~~d---------g~v~iwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~ 199 (424)
..++|+|+++ .||.++.+ +.+.+||+.+ +. ...+..|...+...+|||+|+ .|+.+ .
T Consensus 65 ~~~~~Spdg~-~l~~~~~~~~~~r~~~~~~~~~~d~~~--------~~---~~~l~~~~~~~~~~~~SPdG~-~la~~-~ 130 (740)
T 4a5s_A 65 NDYSISPDGQ-FILLEYNYVKQWRHSYTASYDIYDLNK--------RQ---LITEERIPNNTQWVTWSPVGH-KLAYV-W 130 (740)
T ss_dssp CEEEECTTSS-EEEEEEEEEECSSSCEEEEEEEEETTT--------TE---ECCSSCCCTTEEEEEECSSTT-CEEEE-E
T ss_pred cceEECCCCC-EEEEEECCeeeEEEccceEEEEEECCC--------Cc---EEEcccCCCcceeeEECCCCC-EEEEE-E
Confidence 4588999998 56666655 6678999987 22 223556778899999999998 57766 4
Q ss_pred CCcEEEEeCCCCCCCCcccc----eeeeecCC---------cceeeEEeeCCCCcEEEEEeCCC----------------
Q 014472 200 DAQICLWDINAAPKNKSLEA----MQIFKVHE---------GVVEDVAWHLRHEYLFGSVGDDQ---------------- 250 (424)
Q Consensus 200 dg~i~vwd~~~~~~~~~~~~----~~~~~~~~---------~~v~~i~~~~~~~~~~~s~~~dg---------------- 250 (424)
++.|++|++.++... .+.. ...+.++. +....+.|+|+|+.++.+..+++
T Consensus 131 ~~~i~~~~~~~~~~~-~lt~~g~~~~~~~g~~~~v~~ee~~~~~~~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~~~ 209 (740)
T 4a5s_A 131 NNDIYVKIEPNLPSY-RITWTGKEDIIYNGITDWVYEEEVFSAYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQ 209 (740)
T ss_dssp TTEEEEESSTTSCCE-ECCSCCBTTTEEESBCCHHHHHHTSSSSBCEEECTTSSEEEEEEEECTTCCEEEEEECCSTTCS
T ss_pred CCeEEEEECCCCceE-EEcCCCCccceecCcccccccchhcCCCcceEECCCCCEEEEEEEcccCCceEEEEeecCCCCC
Confidence 689999999876431 1100 00112222 12235899999986643322222
Q ss_pred -------------------eEEEEECCC---CCCCCCeeEec------ccCCCeeEEEecCCCCeEEEEEe-C---CCcE
Q 014472 251 -------------------YLLIWDLRT---PSVSKPVQSVV------AHQSEVNCLAFNPFNEWILATGS-T---DKTV 298 (424)
Q Consensus 251 -------------------~i~i~d~~~---~~~~~~~~~~~------~~~~~v~~i~~~~~~~~~l~~g~-~---dg~i 298 (424)
.|++||+.+ +.... ...+. .|...+..++|+|+++. ++... . +..|
T Consensus 210 ~~~~~~~~yp~~G~~~~~~~l~v~d~~~~~~~~~~~-~~~l~~~~~~~~~~~~~~~~~wspdg~~-~~~~~~r~~~~~~i 287 (740)
T 4a5s_A 210 YPKTVRVPYPKAGAVNPTVKFFVVNTDSLSSVTNAT-SIQITAPASMLIGDHYLCDVTWATQERI-SLQWLRRIQNYSVM 287 (740)
T ss_dssp SCEEEEEECCBTTSCCCEEEEEEEETTSCCSSSCCC-EEEECCCHHHHTSCEEEEEEEEEETTEE-EEEEEESSTTEEEE
T ss_pred CCcceeecCCCCcCcCCeeEEEEEECCCCCCCCcce-EEEecCCccCCCCCeEEEEEEEeCCCeE-EEEEeCCCCCEEEE
Confidence 578889887 53211 22332 26778999999999984 44433 2 2379
Q ss_pred EEEECCCCCC------cceee--cCCCCCEE-----EEEEcCCCCcEEEEEe-CCC--eEEEeeCCCC
Q 014472 299 KLFDLRKIST------ALHTF--DSHKEEVF-----QVGWNPKNETILASCC-LGR--RLMVWDLSRI 350 (424)
Q Consensus 299 ~iwd~~~~~~------~~~~~--~~~~~~v~-----~~~~sp~~~~~l~s~~-~dg--~i~iwd~~~~ 350 (424)
.+||+.+ +. .+..+ ..|...|. ...|+|+|+.+++..+ .+| .|.+|++..+
T Consensus 288 ~~~d~~t-g~~~~~~~~~~~l~~~~~~~~v~~~~~~~p~fspDG~~l~~~~s~~~G~~~l~~~~~~~~ 354 (740)
T 4a5s_A 288 DICDYDE-SSGRWNCLVARQHIEMSTTGWVGRFRPSEPHFTLDGNSFYKIISNEEGYRHICYFQIDKK 354 (740)
T ss_dssp EEEEEET-TTTEEEECGGGCEEEECSSSCSSSSSCCCCEECTTSSEEEEEEECTTSCEEEEEEETTCS
T ss_pred EEEECCC-CccccceeEEEEeeeccCCceEccCcCCCceEcCCCCEEEEEEEcCCCceEEEEEECCCC
Confidence 9999987 33 12222 44555554 7899999986552444 455 4777777653
No 177
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.60 E-value=1.1e-12 Score=117.85 Aligned_cols=245 Identities=9% Similarity=0.067 Sum_probs=161.0
Q ss_pred CCceeEEEecCCCCcEEEE-------EecCCeEEEEeCCCCCCCCCCCCCCCCcEEEe-----cCCCCeeeEEecCC-CC
Q 014472 125 DGEVNRARYMPQNPFLIAT-------KTVSAEVYVFDYSKHPSKPPLDGACSPDLRLR-----GHSTEGYGLSWSKF-KE 191 (424)
Q Consensus 125 ~~~v~~i~~~p~~~~~lat-------g~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~-----~h~~~v~~l~~~~~-~~ 191 (424)
-....+++|.+++. ++++ +..++.|.+|+... + . ...+. ++...+.++++.++ +.
T Consensus 17 ~~~~~~~~~~~~g~-l~~~~~~~~~~~~~~~~i~~~d~~~--------g--~-~~~~~~~~~~~~~~~~~~i~~~~~~g~ 84 (314)
T 1pjx_A 17 IPGAEGPVFDKNGD-FYIVAPEVEVNGKPAGEILRIDLKT--------G--K-KTVICKPEVNGYGGIPAGCQCDRDANQ 84 (314)
T ss_dssp CTTCEEEEECTTSC-EEEEETTCEETTEECCEEEEECTTT--------C--C-EEEEECCEETTEECCEEEEEECSSSSE
T ss_pred CCCccCceECCCCC-EEEEEeccccCCCCCCEEEEEeCCC--------C--c-EEEEEecccCCCCCCCceEEEecCCCc
Confidence 34567899998885 6666 56788999999765 1 1 12222 24467899999998 54
Q ss_pred ceEEEEeCCCcEEEEeCCCCCCCCcccceeeee-cCCcceeeEEeeCCCCcEEEEEeCC---------------CeEEEE
Q 014472 192 GHLLSGSDDAQICLWDINAAPKNKSLEAMQIFK-VHEGVVEDVAWHLRHEYLFGSVGDD---------------QYLLIW 255 (424)
Q Consensus 192 ~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~-~~~~~v~~i~~~~~~~~~~~s~~~d---------------g~i~i~ 255 (424)
|..++..+.|.+||.. +... .+. ..... .....+.++++++++. ++++...+ +.|..|
T Consensus 85 --l~v~~~~~~l~~~d~~-g~~~-~~~-~~~~~~~~~~~~~~i~~d~~g~-l~v~~~~~~~~~~~~~~~~~~~~~~l~~~ 158 (314)
T 1pjx_A 85 --LFVADMRLGLLVVQTD-GTFE-EIA-KKDSEGRRMQGCNDCAFDYEGN-LWITAPAGEVAPADYTRSMQEKFGSIYCF 158 (314)
T ss_dssp --EEEEETTTEEEEEETT-SCEE-ECC-SBCTTSCBCBCCCEEEECTTSC-EEEEECBCBCTTSCCCBTTSSSCEEEEEE
T ss_pred --EEEEECCCCEEEEeCC-CCEE-EEE-eccCCCccccCCcCEEECCCCC-EEEEecCcccccccccccccCCCCeEEEE
Confidence 4444445578999987 4211 000 00001 1224588999999986 55555444 567777
Q ss_pred ECCCCCCCCCeeEecccCCCeeEEEec----CCCCeEEEEEeCCCcEEEEECCCCCC-----cceeecCCC-CCEEEEEE
Q 014472 256 DLRTPSVSKPVQSVVAHQSEVNCLAFN----PFNEWILATGSTDKTVKLFDLRKIST-----ALHTFDSHK-EEVFQVGW 325 (424)
Q Consensus 256 d~~~~~~~~~~~~~~~~~~~v~~i~~~----~~~~~~l~~g~~dg~i~iwd~~~~~~-----~~~~~~~~~-~~v~~~~~ 325 (424)
|.. ++ +..+..+......++|+ |+++.++++...++.|.+||+...+. ....+..+. ..+..+++
T Consensus 159 ~~~-g~----~~~~~~~~~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~ 233 (314)
T 1pjx_A 159 TTD-GQ----MIQVDTAFQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDF 233 (314)
T ss_dssp CTT-SC----EEEEEEEESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEE
T ss_pred CCC-CC----EEEeccCCCCcceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCccccceEEEECCCCCCCCCCceEE
Confidence 765 32 22232334557889999 98876666666788999999862122 223334443 56889999
Q ss_pred cCCCCcEEEEEeCCCeEEEeeCCCCCcccCCCccCCCCCeeeEEEcCCCCCcceEEeCCCCCcEEEEEeCCCcEEEEecC
Q 014472 326 NPKNETILASCCLGRRLMVWDLSRIDEEQTPEDAEDGPPELLFIHGGHTSKISDFSWNPCEDWVISSVAEDNILQIWQMA 405 (424)
Q Consensus 326 sp~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iw~~~ 405 (424)
++++. ++++...++.|.+||..++. .+..+..+...+.+++|++++..++++...++.|..|++.
T Consensus 234 d~~G~-l~v~~~~~~~i~~~d~~~g~--------------~~~~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~l~~~~~~ 298 (314)
T 1pjx_A 234 DEDNN-LLVANWGSSHIEVFGPDGGQ--------------PKMRIRCPFEKPSNLHFKPQTKTIFVTEHENNAVWKFEWQ 298 (314)
T ss_dssp BTTCC-EEEEEETTTEEEEECTTCBS--------------CSEEEECSSSCEEEEEECTTSSEEEEEETTTTEEEEEECS
T ss_pred CCCCC-EEEEEcCCCEEEEEcCCCCc--------------EeEEEeCCCCCceeEEECCCCCEEEEEeCCCCeEEEEeCC
Confidence 99995 77777778899999987432 2223334456789999999998666776677899999987
Q ss_pred CC
Q 014472 406 EN 407 (424)
Q Consensus 406 ~~ 407 (424)
..
T Consensus 299 ~~ 300 (314)
T 1pjx_A 299 RN 300 (314)
T ss_dssp SC
T ss_pred CC
Confidence 53
No 178
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.60 E-value=1.6e-13 Score=124.45 Aligned_cols=246 Identities=9% Similarity=0.050 Sum_probs=163.9
Q ss_pred CceeEEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCCeeeEEecCCCCceEEEEeCCCcEEE
Q 014472 126 GEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDDAQICL 205 (424)
Q Consensus 126 ~~v~~i~~~p~~~~~latg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~v 205 (424)
..|.+++|+|++. .++..+.++.++.|.- .....+..+...+.+++|++++. +++++..++.|.+
T Consensus 6 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~g~-l~~~~~~~~~i~~ 70 (333)
T 2dg1_A 6 QDLPTLFYSGKSN-SAVPIISESELQTITA-------------EPWLEISKKGLQLEGLNFDRQGQ-LFLLDVFEGNIFK 70 (333)
T ss_dssp CCCCBCCSCGGGG-CSSCCCCGGGSCEEEC-------------EEEEEEESSCCCEEEEEECTTSC-EEEEETTTCEEEE
T ss_pred cccceeeecCCcc-ceeEEeecccCccccc-------------ceeEEEeccCccccCcEECCCCC-EEEEECCCCEEEE
Confidence 4578899999765 4555567888888832 22455666777789999999887 6778888999999
Q ss_pred EeCCCCCCCCcccceeeeecCCcceeeEEeeCCCCcEEEEEeCC----CeEEEEECCCCCCCCCeeEec--ccCCCeeEE
Q 014472 206 WDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDD----QYLLIWDLRTPSVSKPVQSVV--AHQSEVNCL 279 (424)
Q Consensus 206 wd~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~~s~~~d----g~i~i~d~~~~~~~~~~~~~~--~~~~~v~~i 279 (424)
||..++.. ......+...+.++++++++. ++++...+ +.|.+||..+... ...+. .+...+..+
T Consensus 71 ~d~~~~~~------~~~~~~~~~~~~~i~~~~dg~-l~v~~~~~~~~~~~i~~~d~~~~~~---~~~~~~~~~~~~~~~i 140 (333)
T 2dg1_A 71 INPETKEI------KRPFVSHKANPAAIKIHKDGR-LFVCYLGDFKSTGGIFAATENGDNL---QDIIEDLSTAYCIDDM 140 (333)
T ss_dssp ECTTTCCE------EEEEECSSSSEEEEEECTTSC-EEEEECTTSSSCCEEEEECTTSCSC---EEEECSSSSCCCEEEE
T ss_pred EeCCCCcE------EEEeeCCCCCcceEEECCCCc-EEEEeCCCCCCCceEEEEeCCCCEE---EEEEccCccCCcccce
Confidence 99876531 111223567899999999986 66566555 6899999887653 11121 234578999
Q ss_pred EecCCCCeEEEEEeC------CCcEEEEECCCCCCcceeecCCCCCEEEEEEcCCCCcEEEEEeCCCeEEEeeCCCCCc-
Q 014472 280 AFNPFNEWILATGST------DKTVKLFDLRKISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDE- 352 (424)
Q Consensus 280 ~~~~~~~~~l~~g~~------dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~s~~~dg~i~iwd~~~~~~- 352 (424)
+++|++. ++++... .+.|..+|... + .+..+..+...+..++|+|++..++++.+.++.|.+|++.....
T Consensus 141 ~~d~~g~-l~v~~~~~~~~~~~~~l~~~~~~~-~-~~~~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~i~~~d~~~~g~~ 217 (333)
T 2dg1_A 141 VFDSKGG-FYFTDFRGYSTNPLGGVYYVSPDF-R-TVTPIIQNISVANGIALSTDEKVLWVTETTANRLHRIALEDDGVT 217 (333)
T ss_dssp EECTTSC-EEEEECCCBTTBCCEEEEEECTTS-C-CEEEEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSSS
T ss_pred EECCCCC-EEEEeccccccCCCceEEEEeCCC-C-EEEEeecCCCcccceEECCCCCEEEEEeCCCCeEEEEEecCCCcC
Confidence 9999987 5555443 24555565543 2 23333233346789999999975666666788999999864211
Q ss_pred ccCCCccCCCCCeeeEEEcCCCCCcceEEeCCCCCcEEEEEeCCCcEEEEecCCC
Q 014472 353 EQTPEDAEDGPPELLFIHGGHTSKISDFSWNPCEDWVISSVAEDNILQIWQMAEN 407 (424)
Q Consensus 353 ~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iw~~~~~ 407 (424)
.... .........++ ..+..++++++|. ++++...++.|.+|+....
T Consensus 218 ~~~~------~~~~~~~~~~~-~~~~~i~~d~~G~-l~v~~~~~~~v~~~d~~g~ 264 (333)
T 2dg1_A 218 IQPF------GATIPYYFTGH-EGPDSCCIDSDDN-LYVAMYGQGRVLVFNKRGY 264 (333)
T ss_dssp EEEE------EEEEEEECCSS-SEEEEEEEBTTCC-EEEEEETTTEEEEECTTSC
T ss_pred cccc------cceEEEecCCC-CCCCceEECCCCC-EEEEEcCCCEEEEECCCCC
Confidence 0000 00111122232 3578899999998 6777777889999998544
No 179
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.60 E-value=2.8e-13 Score=123.59 Aligned_cols=224 Identities=14% Similarity=0.166 Sum_probs=141.1
Q ss_pred CceeEEEecCCCCcEEEEEecC---C--eEEEEeCCCCCCCCCCCCCCCCcEEEecCCCCeeeEEecCCCCceEEEEeC-
Q 014472 126 GEVNRARYMPQNPFLIATKTVS---A--EVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSD- 199 (424)
Q Consensus 126 ~~v~~i~~~p~~~~~latg~~d---g--~v~iwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~- 199 (424)
..+..++|+|+|+. ||..+.+ + .|.+|++.. .. ...+..+.. +..++|+|++. .|+.++.
T Consensus 59 ~~~~~~~~SpDg~~-la~~~~~~~~~~~~l~~~~~~~----------g~-~~~l~~~~~-~~~~~wspdg~-~l~~~~~~ 124 (347)
T 2gop_A 59 ENATMPRISPDGKK-IAFMRANEEKKVSEIWVADLET----------LS-SKKILEAKN-IRSLEWNEDSR-KLLIVGFK 124 (347)
T ss_dssp ESCEEEEECTTSSE-EEEEEEETTTTEEEEEEEETTT----------TE-EEEEEEESE-EEEEEECTTSS-EEEEEEEC
T ss_pred ccCCCeEECCCCCE-EEEEEeccCCCcceEEEEECCC----------Cc-eEEEEcCCC-ccceeECCCCC-EEEEEEcc
Confidence 56888999999984 5544432 3 477777765 12 223333334 99999999998 4665543
Q ss_pred --------------------------CCcEEEEeCCCCCCCCcccceeeeecCCcceeeEEeeCCCCcEEEEEeCCC---
Q 014472 200 --------------------------DAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQ--- 250 (424)
Q Consensus 200 --------------------------dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~~s~~~dg--- 250 (424)
...|.+||+.++. .+..+.. . .+..+.|+|++ +++++..++
T Consensus 125 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~------~~~~l~~-~-~~~~~~~spdg--~~~~~~~~~~~~ 194 (347)
T 2gop_A 125 RREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEE------VIEEFEK-P-RFSSGIWHRDK--IVVNVPHREIIP 194 (347)
T ss_dssp CCC---------CCCC---------CEEEEEEEETTTTE------EEEEEEE-E-TTCEEEEETTE--EEEEEECCCSSC
T ss_pred CCCcCCcEEEcccceeecCcccccCccceEEEEECCCCe------EEeeecC-C-CcccccCCCCe--EEEEEecccccc
Confidence 2568899997652 1122222 3 78899999998 554555432
Q ss_pred ----eEEEEECCCCCCCCCeeEecccCCCeeEEEecCCCCeEEEEEeCC-------CcEEEEECCCCCCcceeecCCCCC
Q 014472 251 ----YLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATGSTD-------KTVKLFDLRKISTALHTFDSHKEE 319 (424)
Q Consensus 251 ----~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~l~~g~~d-------g~i~iwd~~~~~~~~~~~~~~~~~ 319 (424)
...||.+.++. ...+..+ ..+..+ +|+|+.+++.+..+ ..|.+|| . +........+...
T Consensus 195 ~~~~~~~l~~~d~~~----~~~l~~~-~~~~~~--spdg~~l~~~~~~~~~~~~~~~~l~~~d--~-~~~~~l~~~~~~~ 264 (347)
T 2gop_A 195 QYFKFWDIYIWEDGK----EEKMFEK-VSFYAV--DSDGERILLYGKPEKKYMSEHNKLYIYD--G-KEVMGILDEVDRG 264 (347)
T ss_dssp CSSCCEEEEEEETTE----EEEEEEE-ESEEEE--EECSSCEEEEECCSSSCCCSSCEEEEEC--S-SCEEESSTTCCSE
T ss_pred cccccccEEEeCCCc----eEEeccC-cceeeE--CCCCCEEEEEEccccCCccccceEEEEC--C-CceEeccccCCcc
Confidence 33444444322 3333334 445444 89998644444332 4688888 3 4444444556778
Q ss_pred EEE-EEEcCCCCcEEEEEeCCCeEEEeeCCCCCcccCCCccCCCCCeeeEEEcCCCCCcceEEeCCCCCcEEEEEeCCCc
Q 014472 320 VFQ-VGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPEDAEDGPPELLFIHGGHTSKISDFSWNPCEDWVISSVAEDNI 398 (424)
Q Consensus 320 v~~-~~~sp~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~ 398 (424)
+.. +.|+ ++ ++++++.++.++|| +..+ +... +..+...|.+++|+| . ++++++.++.
T Consensus 265 ~~~~~~~s-dg--~~~~~~~~~~~~l~-~~~g--------------~~~~-~~~~~~~v~~~~~s~--~-~~~~~~~~~~ 322 (347)
T 2gop_A 265 VGQAKIKD-GK--VYFTLFEEGSVNLY-IWDG--------------EIKP-IAKGRHWIMGFDVDE--I-VVYLKETATR 322 (347)
T ss_dssp EEEEEEET-TE--EEEEEEETTEEEEE-EESS--------------SEEE-EECSSSEEEEEEESS--S-EEEEEECSSS
T ss_pred cCCccEEc-Cc--EEEEEecCCcEEEE-EcCC--------------ceEE-EecCCCeEEeeeeeC--c-EEEEEcCCCC
Confidence 886 9999 66 78889999999999 8632 1122 223466789999999 5 6777776665
Q ss_pred E-EEEecC
Q 014472 399 L-QIWQMA 405 (424)
Q Consensus 399 i-~iw~~~ 405 (424)
. .||.+.
T Consensus 323 ~~~l~~~~ 330 (347)
T 2gop_A 323 LRELFTWD 330 (347)
T ss_dssp CCEEEEES
T ss_pred hHHheEeC
Confidence 5 788775
No 180
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.59 E-value=1.3e-13 Score=138.05 Aligned_cols=251 Identities=8% Similarity=-0.086 Sum_probs=159.8
Q ss_pred cCCceeEEEecCCCCcEEEE----EecCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCCeeeEEecCCCCceEEEEeC
Q 014472 124 HDGEVNRARYMPQNPFLIAT----KTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSD 199 (424)
Q Consensus 124 h~~~v~~i~~~p~~~~~lat----g~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~ 199 (424)
|...+..++|+|+|+.++.+ |+.+..|++||+.+. .......+.. ....+++|+|+++ .|+.++.
T Consensus 119 ~~~~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~tg--------~~~~~~~~~~--~~~~~~~wspDg~-~l~~~~~ 187 (695)
T 2bkl_A 119 GTVSLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVDSG--------EWSKVDVIEG--GKYATPKWTPDSK-GFYYEWL 187 (695)
T ss_dssp SCEEEEEEEECTTSSEEEEEEEETTCSCCEEEEEETTTC--------CBCSSCCBSC--CTTCCCEECTTSS-EEEEEEC
T ss_pred CCEEEEEEEECCCCCEEEEEECCCCCceEEEEEEECCCC--------CCcCCcccCc--ccccceEEecCCC-EEEEEEe
Confidence 44578899999999843333 333468999999872 1110001111 1126899999998 5777777
Q ss_pred CCc-------------EEEEeCCCCCCCCcccceeeeecCCcceeeEEeeCCCCcEEEEEeCC-C--eEEEEECCCCCCC
Q 014472 200 DAQ-------------ICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDD-Q--YLLIWDLRTPSVS 263 (424)
Q Consensus 200 dg~-------------i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~~s~~~d-g--~i~i~d~~~~~~~ 263 (424)
|.. |++|++.++.... ..+.....+...+..+.|+|+++.++++...+ + .|.++|..++.
T Consensus 188 d~~~~~~~~~~~~~~~v~~~~l~t~~~~~--~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~l~~~~~~~~~-- 263 (695)
T 2bkl_A 188 PTDPSIKVDERPGYTTIRYHTLGTEPSKD--TVVHERTGDPTTFLQSDLSRDGKYLFVYILRGWSENDVYWKRPGEKD-- 263 (695)
T ss_dssp CCCTTSCGGGGGGGCEEEEEETTSCGGGC--EEEECCCCCTTCEEEEEECTTSCCEEEEEEETTTEEEEEEECTTCSS--
T ss_pred cCCCCCccccCCCCCEEEEEECCCCchhc--eEEEecCCCCEEEEEEEECCCCCEEEEEEeCCCCceEEEEEcCCCCc--
Confidence 765 9999998763211 11222233556788999999998876555443 3 56666554332
Q ss_pred CCeeEecccCCCeeEEEecCCCCeEEEEEe---CCCcEEEEECCCCCC-cceeecCC--CCCEEEEEEcCCCCcEEEEEe
Q 014472 264 KPVQSVVAHQSEVNCLAFNPFNEWILATGS---TDKTVKLFDLRKIST-ALHTFDSH--KEEVFQVGWNPKNETILASCC 337 (424)
Q Consensus 264 ~~~~~~~~~~~~v~~i~~~~~~~~~l~~g~---~dg~i~iwd~~~~~~-~~~~~~~~--~~~v~~~~~sp~~~~~l~s~~ 337 (424)
...+..+...+....+ +++. +++.+. .++.|.+||+.+... ....+..+ ...+..++|+ ++ .++++..
T Consensus 264 --~~~l~~~~~~~~~~~~-~~g~-l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~l~~~~~~-~~-~lv~~~~ 337 (695)
T 2bkl_A 264 --FRLLVKGVGAKYEVHA-WKDR-FYVLTDEGAPRQRVFEVDPAKPARASWKEIVPEDSSASLLSVSIV-GG-HLSLEYL 337 (695)
T ss_dssp --CEEEEECSSCCEEEEE-ETTE-EEEEECTTCTTCEEEEEBTTBCSGGGCEEEECCCSSCEEEEEEEE-TT-EEEEEEE
T ss_pred --eEEeecCCCceEEEEe-cCCc-EEEEECCCCCCCEEEEEeCCCCCccCCeEEecCCCCCeEEEEEEE-CC-EEEEEEE
Confidence 3444455566666667 5666 666655 357899999976321 12333333 4467888888 44 5888999
Q ss_pred CCCeEEEeeCCCCCcccCCCccCCCCCeeeEEEcCC-CCCcceEEeCCCCCcEEEEEe---CCCcEEEEecCCCC
Q 014472 338 LGRRLMVWDLSRIDEEQTPEDAEDGPPELLFIHGGH-TSKISDFSWNPCEDWVISSVA---EDNILQIWQMAENI 408 (424)
Q Consensus 338 ~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h-~~~v~~~~~~~~~~~~l~s~~---~d~~i~iw~~~~~~ 408 (424)
.|+..+||.+.... .....+..+ ...+..++++|+++.++++.+ ..+.|++|++.++.
T Consensus 338 ~dg~~~l~~~~~~g-------------~~~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~v~~~d~~~g~ 399 (695)
T 2bkl_A 338 KDATSEVRVATLKG-------------KPVRTVQLPGVGAASNLMGLEDLDDAYYVFTSFTTPRQIYKTSVSTGK 399 (695)
T ss_dssp ETTEEEEEEEETTC-------------CEEEECCCSSSSEECCCBSCTTCSEEEEEEEETTEEEEEEEEETTTCC
T ss_pred ECCEEEEEEEeCCC-------------CeeEEecCCCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCCc
Confidence 99998888665211 122333333 556788899999985555544 34689999998764
No 181
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.59 E-value=8.7e-14 Score=129.23 Aligned_cols=232 Identities=7% Similarity=-0.004 Sum_probs=142.9
Q ss_pred EEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCCeee-------------------EEecCCC
Q 014472 130 RARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYG-------------------LSWSKFK 190 (424)
Q Consensus 130 ~i~~~p~~~~~latg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~-------------------l~~~~~~ 190 (424)
.+.|+|+++ .|+.++.++.|++|++.. .........+...... +.|+|++
T Consensus 85 ~~~~spdg~-~l~~~~~~~~l~~~d~~~----------~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg 153 (396)
T 3c5m_A 85 GGFISTDER-AFFYVKNELNLMKVDLET----------LEEQVIYTVDEEWKGYGTWVANSDCTKLVGIEILKRDWQPLT 153 (396)
T ss_dssp TCEECTTSS-EEEEEETTTEEEEEETTT----------CCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCC
T ss_pred cceECCCCC-EEEEEEcCCcEEEEECCC----------CCcEEEEecccccCCCCCEEEeccCCccccccccccccCCCC
Confidence 478999997 677777888999999876 1222222223322222 4677877
Q ss_pred CceEEEE-----eCCCcEEEEeCCCCCCCCcccceeeeecCCcceeeEEeeC-CCCcEEEEEeCC------CeEEEEECC
Q 014472 191 EGHLLSG-----SDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHL-RHEYLFGSVGDD------QYLLIWDLR 258 (424)
Q Consensus 191 ~~~l~s~-----~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~-~~~~~~~s~~~d------g~i~i~d~~ 258 (424)
.. ++.+ ..+..|.+||+.++.. ..+..+...+..+.|+| ++..++ .++.+ ..|.+||+.
T Consensus 154 ~~-~~~~~~~~~~~~~~l~~~d~~~g~~-------~~~~~~~~~~~~~~~sp~dg~~l~-~~~~~~~~~~~~~l~~~d~~ 224 (396)
T 3c5m_A 154 SW-EKFAEFYHTNPTCRLIKVDIETGEL-------EVIHQDTAWLGHPIYRPFDDSTVG-FCHEGPHDLVDARMWLVNED 224 (396)
T ss_dssp SH-HHHHHHHHTCCCEEEEEEETTTCCE-------EEEEEESSCEEEEEEETTEEEEEE-EEECSCSSSCSCCCEEEETT
T ss_pred cc-eeeeeeccCCCcceEEEEECCCCcE-------EeeccCCcccccceECCCCCCEEE-EEecCCCCCCCceEEEEECC
Confidence 63 4433 4567899999976531 22224567789999999 666454 33333 468889987
Q ss_pred CCCCCCCeeEeccc--CCCeeEEEecCCCCeEEEEEeCC----CcEEEEECCCCCCcceeecCCCCCEEEEEEcC-CCCc
Q 014472 259 TPSVSKPVQSVVAH--QSEVNCLAFNPFNEWILATGSTD----KTVKLFDLRKISTALHTFDSHKEEVFQVGWNP-KNET 331 (424)
Q Consensus 259 ~~~~~~~~~~~~~~--~~~v~~i~~~~~~~~~l~~g~~d----g~i~iwd~~~~~~~~~~~~~~~~~v~~~~~sp-~~~~ 331 (424)
.... ..+..+ ...+..++|+|+++.+++++..+ +.|++||+.+ +........ . ... +.|+| +++
T Consensus 225 ~~~~----~~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~-g~~~~l~~~-~-~~~-~~~s~~dg~- 295 (396)
T 3c5m_A 225 GSNV----RKIKEHAEGESCTHEFWIPDGSAMAYVSYFKGQTDRVIYKANPET-LENEEVMVM-P-PCS-HLMSNFDGS- 295 (396)
T ss_dssp SCCC----EESSCCCTTEEEEEEEECTTSSCEEEEEEETTTCCEEEEEECTTT-CCEEEEEEC-C-SEE-EEEECSSSS-
T ss_pred CCce----eEeeccCCCccccceEECCCCCEEEEEecCCCCccceEEEEECCC-CCeEEeeeC-C-CCC-CCccCCCCc-
Confidence 6442 222222 23578899999998644443332 3499999986 333222211 1 233 89999 997
Q ss_pred EEEEEe----------------CCCeEEEeeCCCCCcccCCCccCCCCCeeeEEEcCCCC-----------CcceEEeCC
Q 014472 332 ILASCC----------------LGRRLMVWDLSRIDEEQTPEDAEDGPPELLFIHGGHTS-----------KISDFSWNP 384 (424)
Q Consensus 332 ~l~s~~----------------~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~-----------~v~~~~~~~ 384 (424)
++++++ .++.|.+||+..+.. ..+. .+.. .+..++|+|
T Consensus 296 ~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d~~~~~~------------~~l~---~~~~~~~~~~~~~~~~~~~~~~s~ 360 (396)
T 3c5m_A 296 LMVGDGCDAPVDVADADSYNIENDPFLYVLNTKAKSA------------QKLC---KHSTSWDVLDGDRQITHPHPSFTP 360 (396)
T ss_dssp EEEEEECCC----------CCCCCCEEEEEETTTTBC------------CEEE---ECCCCCCCBTTBSSTTCCCCEECT
T ss_pred eEEEecCCcceeeccccccccCCCCcEEEEecccCce------------EEcc---CCCCccccccccccCCCCCceEcc
Confidence 565543 346799999876431 1121 2222 256789999
Q ss_pred CCCcEEEEEeCCCcEEEEecC
Q 014472 385 CEDWVISSVAEDNILQIWQMA 405 (424)
Q Consensus 385 ~~~~~l~s~~~d~~i~iw~~~ 405 (424)
+++.+++++..++...||.+.
T Consensus 361 dg~~l~~~s~~~~~~~l~~~~ 381 (396)
T 3c5m_A 361 NDDGVLFTSDFEGVPAIYIAD 381 (396)
T ss_dssp TSSEEEEEECTTSSCEEEEEE
T ss_pred CCCeEEEEecCCCCceEEEEE
Confidence 999655555556766666653
No 182
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.58 E-value=1.3e-11 Score=109.86 Aligned_cols=242 Identities=6% Similarity=-0.043 Sum_probs=163.8
Q ss_pred ccCCceeEEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCCeeeEEecCCCCceEEEEeCCCc
Q 014472 123 NHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDDAQ 202 (424)
Q Consensus 123 ~h~~~v~~i~~~p~~~~~latg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~ 202 (424)
.+...+.++++.+++. +.++...++.|.+|+... ......+..+...+.++++.+++. ++++...++.
T Consensus 12 ~~~~~~~~i~~d~~g~-l~v~~~~~~~v~~~d~~~----------~~~~~~~~~~~~~~~~i~~~~~g~-l~v~~~~~~~ 79 (299)
T 2z2n_A 12 NQDTGPYGITVSDKGK-VWITQHKANMISCINLDG----------KITEYPLPTPDAKVMCLTISSDGE-VWFTENAANK 79 (299)
T ss_dssp SSSCCEEEEEECTTSC-EEEEETTTTEEEEECTTC----------CEEEEECSSTTCCEEEEEECTTSC-EEEEETTTTE
T ss_pred CcCCCccceEECCCCC-EEEEecCCCcEEEEcCCC----------CeEEecCCcccCceeeEEECCCCC-EEEeCCCCCe
Confidence 3456889999999886 566555578999998763 111111223456789999999876 5666666888
Q ss_pred EEEEeCCCCCCCCcccceeeeecCCcceeeEEeeCCCCcEEEEEeCCCeEEEEECCCCCCCCCeeEecccCCCeeEEEec
Q 014472 203 ICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFN 282 (424)
Q Consensus 203 i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~ 282 (424)
|..|+.. +. +... ........+..+++.+++. ++++...++.|.+||. ++.. ...........+..++++
T Consensus 80 i~~~~~~-g~----~~~~-~~~~~~~~~~~i~~~~~g~-l~v~~~~~~~i~~~d~-~g~~--~~~~~~~~~~~~~~i~~~ 149 (299)
T 2z2n_A 80 IGRITKK-GI----IKEY-TLPNPDSAPYGITEGPNGD-IWFTEMNGNRIGRITD-DGKI--REYELPNKGSYPSFITLG 149 (299)
T ss_dssp EEEECTT-SC----EEEE-ECSSTTCCEEEEEECTTSC-EEEEETTTTEEEEECT-TCCE--EEEECSSTTCCEEEEEEC
T ss_pred EEEECCC-Cc----EEEE-eCCCcCCCceeeEECCCCC-EEEEecCCceEEEECC-CCCE--EEecCCCCCCCCceEEEc
Confidence 9999975 21 1111 1112345788999999875 6666667889999998 4331 111122344678999999
Q ss_pred CCCCeEEEEEeCCCcEEEEECCCCCCccee-ecCCCCCEEEEEEcCCCCcEEEEEeCCCeEEEeeCCCCCcccCCCccCC
Q 014472 283 PFNEWILATGSTDKTVKLFDLRKISTALHT-FDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPEDAED 361 (424)
Q Consensus 283 ~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~-~~~~~~~v~~~~~sp~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~ 361 (424)
+++. ++++...++.|..||. + +..... ...+...+..+++++++. ++++...++.|.+|+. .+.
T Consensus 150 ~~g~-l~v~~~~~~~i~~~~~-~-g~~~~~~~~~~~~~~~~i~~~~~g~-l~v~~~~~~~i~~~~~-~g~---------- 214 (299)
T 2z2n_A 150 SDNA-LWFTENQNNAIGRITE-S-GDITEFKIPTPASGPVGITKGNDDA-LWFVEIIGNKIGRITT-SGE---------- 214 (299)
T ss_dssp TTSC-EEEEETTTTEEEEECT-T-CCEEEEECSSTTCCEEEEEECTTSS-EEEEETTTTEEEEECT-TCC----------
T ss_pred CCCC-EEEEeCCCCEEEEEcC-C-CcEEEeeCCCCCCcceeEEECCCCC-EEEEccCCceEEEECC-CCc----------
Confidence 9886 6666666789999998 4 333222 333456788999999985 6666666788999998 432
Q ss_pred CCCeeeEEEcCCCCCcceEEeCCCCCcEEEEEeCCCcEEEEecC
Q 014472 362 GPPELLFIHGGHTSKISDFSWNPCEDWVISSVAEDNILQIWQMA 405 (424)
Q Consensus 362 ~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iw~~~ 405 (424)
........+...+.+++++++|. ++++...++.|.+|+..
T Consensus 215 ---~~~~~~~~~~~~~~~i~~~~~g~-l~v~~~~~~~i~~~d~~ 254 (299)
T 2z2n_A 215 ---ITEFKIPTPNARPHAITAGAGID-LWFTEWGANKIGRLTSN 254 (299)
T ss_dssp ---EEEEECSSTTCCEEEEEECSTTC-EEEEETTTTEEEEEETT
T ss_pred ---EEEEECCCCCCCceeEEECCCCC-EEEeccCCceEEEECCC
Confidence 11122233456688999999998 67776677889999984
No 183
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.57 E-value=1.6e-12 Score=119.35 Aligned_cols=221 Identities=11% Similarity=0.053 Sum_probs=137.2
Q ss_pred EEEecCCCCcEEEEEe---------cCCeEEEEeCCCCCCCCCCCCCCCCcEEEec------CCCCeeeEEecCCCCceE
Q 014472 130 RARYMPQNPFLIATKT---------VSAEVYVFDYSKHPSKPPLDGACSPDLRLRG------HSTEGYGLSWSKFKEGHL 194 (424)
Q Consensus 130 ~i~~~p~~~~~latg~---------~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~------h~~~v~~l~~~~~~~~~l 194 (424)
.++|+|+++.+.++.. .++.|.+||..+ .+....+.. +......++++|+++ +|
T Consensus 54 ~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t----------~~~~~~i~~~~~~~~~g~~p~~i~~spdg~-~l 122 (361)
T 2oiz_A 54 HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADK----------LTFEKEISLPPKRVQGLNYDGLFRQTTDGK-FI 122 (361)
T ss_dssp EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTT----------CCEEEEEEECTTBCCBCCCGGGEEECTTSS-EE
T ss_pred ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcC----------CcEEEEEEcCccccccCCCcceEEECCCCC-EE
Confidence 8999999985444432 367899999876 344444442 234578899999998 56
Q ss_pred EEEeC--CCcEEEEeCCCCCCCCcccceee-eecCCcceeeEEeeCCCCcEEEEEeCCCeEE------------------
Q 014472 195 LSGSD--DAQICLWDINAAPKNKSLEAMQI-FKVHEGVVEDVAWHLRHEYLFGSVGDDQYLL------------------ 253 (424)
Q Consensus 195 ~s~~~--dg~i~vwd~~~~~~~~~~~~~~~-~~~~~~~v~~i~~~~~~~~~~~s~~~dg~i~------------------ 253 (424)
+++.. ++.|.+||+.+.+.. .. +. .. ....+.+.|.+...+++.+.||.+.
T Consensus 123 ~v~n~~~~~~v~v~d~~~~~~~------~~~i~-~~-~~~~v~~~p~~~~~~~~~~~dg~~~~v~~~~~g~~~~~~~~~~ 194 (361)
T 2oiz_A 123 VLQNASPATSIGIVDVAKGDYV------EDVTA-AA-GCWSVIPQPNRPRSFMTICGDGGLLTINLGEDGKVASQSRSKQ 194 (361)
T ss_dssp EEEEESSSEEEEEEETTTTEEE------EEEGG-GT-TEEEEEECTTSSSEEEEEETTSSEEEEEECTTSSEEEEEECCC
T ss_pred EEECCCCCCeEEEEECCCCcEE------EEEec-CC-CcceeEEcCCCCeeEEEECCCCcEEEEEECCCCcEeeeccccc
Confidence 66653 689999999876322 21 11 11 1111233343333333444444444
Q ss_pred ------------------------------EEECCCCCCCCCeeEecc------c----CCCeeEEEecCCCCeEEEEEe
Q 014472 254 ------------------------------IWDLRTPSVSKPVQSVVA------H----QSEVNCLAFNPFNEWILATGS 293 (424)
Q Consensus 254 ------------------------------i~d~~~~~~~~~~~~~~~------~----~~~v~~i~~~~~~~~~l~~g~ 293 (424)
++|+..... ..+..+.. + ......++|+|++..++++..
T Consensus 195 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~v~d~~~~~~-~~~~~~~~~~~~~~~~~~~p~g~~~~a~~~dg~~lyv~~~ 273 (361)
T 2oiz_A 195 MFSVKDDPIFIAPALDKDKAHFVSYYGNVYSADFSGDEV-KVDGPWSLLNDEDKAKNWVPGGYNLVGLHRASGRMYVFMH 273 (361)
T ss_dssp CSCTTTSCBCSCCEECSSEEEEEBTTSEEEEEECSSSSC-EEEEEEESCCHHHHHTTCEECCSSCEEEETTTTEEEEEEE
T ss_pred eEcCCCCceEEEecccCCEEEEEeCCCeEEEEEecCCCc-eecccccccCccccccccccCCeeEEEEecCCCeEEEEEc
Confidence 444432211 00000000 0 011123788999887666554
Q ss_pred C----------CCcEEEEECCCCCCcceeecCCCCCEEEEEEcCCCCcEEEEEeCCCeEEEeeCCCCCcccCCCccCCCC
Q 014472 294 T----------DKTVKLFDLRKISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPEDAEDGP 363 (424)
Q Consensus 294 ~----------dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~ 363 (424)
. .+.|.+||+.+ .+.+.++..+. +.+++|+|+++ +|++++. +.|.+||..++..
T Consensus 274 ~~~~~~~~~~~~~~v~viD~~t-~~~v~~i~~~~--p~~ia~spdg~-~l~v~n~-~~v~v~D~~t~~l----------- 337 (361)
T 2oiz_A 274 PDGKEGTHKFPAAEIWVMDTKT-KQRVARIPGRD--ALSMTIDQQRN-LMLTLDG-GNVNVYDISQPEP----------- 337 (361)
T ss_dssp SSCCTTCTTCCCSEEEEEETTT-TEEEEEEECTT--CCEEEEETTTT-EEEEECS-SCEEEEECSSSSC-----------
T ss_pred cCCCcccccCCCceEEEEECCC-CcEEEEEecCC--eeEEEECCCCC-EEEEeCC-CeEEEEECCCCcc-----------
Confidence 1 34899999998 67888888776 99999999997 5666666 8999999987521
Q ss_pred CeeeEEEcCCCCCcceEEeCCCCC
Q 014472 364 PELLFIHGGHTSKISDFSWNPCED 387 (424)
Q Consensus 364 ~~~~~~~~~h~~~v~~~~~~~~~~ 387 (424)
+++..+..+......++++|+|.
T Consensus 338 -~~~~~i~~~G~~P~~~~~~p~G~ 360 (361)
T 2oiz_A 338 -KLLRTIEGAAEASLQVQFHPVGG 360 (361)
T ss_dssp -EEEEEETTSCSSEEEEEECCCSC
T ss_pred -eeeEEeccCCCCcEEEEecCCCC
Confidence 44555555566778899999986
No 184
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.56 E-value=8.2e-12 Score=120.63 Aligned_cols=269 Identities=8% Similarity=0.045 Sum_probs=175.6
Q ss_pred EEEEeccCCceeEEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCCeeeEEec----CCCCce
Q 014472 118 IIQQINHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWS----KFKEGH 193 (424)
Q Consensus 118 ~~~~~~h~~~v~~i~~~p~~~~~latg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~----~~~~~~ 193 (424)
++.++.....+..++|+|+++ ++.+++.++.|.+||+.. ...+....+.. ......++|+ |+++.+
T Consensus 189 v~~~i~~g~~p~~v~~SpDGr-~lyv~~~dg~V~viD~~~--------~t~~~v~~i~~-G~~P~~ia~s~~~~pDGk~l 258 (567)
T 1qks_A 189 IKTVLDTGYAVHISRLSASGR-YLFVIGRDGKVNMIDLWM--------KEPTTVAEIKI-GSEARSIETSKMEGWEDKYA 258 (567)
T ss_dssp EEEEEECSSCEEEEEECTTSC-EEEEEETTSEEEEEETTS--------SSCCEEEEEEC-CSEEEEEEECCSTTCTTTEE
T ss_pred EEEEEeCCCCccceEECCCCC-EEEEEcCCCeEEEEECCC--------CCCcEeEEEec-CCCCceeEEccccCCCCCEE
Confidence 345566666778999999998 566677899999999951 01333445553 3346799999 688854
Q ss_pred EEEEeCCCcEEEEeCCCCCCCCcccceee-e---ecCCc-ceeeEEeeCCCCcEEEEEeCCCeEEEEECCCCCCCCCeeE
Q 014472 194 LLSGSDDAQICLWDINAAPKNKSLEAMQI-F---KVHEG-VVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQS 268 (424)
Q Consensus 194 l~s~~~dg~i~vwd~~~~~~~~~~~~~~~-~---~~~~~-~v~~i~~~~~~~~~~~s~~~dg~i~i~d~~~~~~~~~~~~ 268 (424)
+++...++.|.++|..+.+....+..... . ..|.. .+..+..+++++.++++...+|.|.++|....... .+..
T Consensus 259 ~v~n~~~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~g~v~~vd~~~~~~~-~v~~ 337 (567)
T 1qks_A 259 IAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKILLVDYTDLNNL-KTTE 337 (567)
T ss_dssp EEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEETTCSSEE-EEEE
T ss_pred EEEEccCCeEEEEECCCCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEecCCCeEEEEecCCCccc-eeee
Confidence 55555679999999876533221111000 0 01222 67788889988877778888899999999765421 1222
Q ss_pred ecccCCCeeEEEecCCCCeEEEEEeCCCcEEEEECCCCCCcceeecC-----CCCCEEEEEEcCCCCcEEEEEe-CCCeE
Q 014472 269 VVAHQSEVNCLAFNPFNEWILATGSTDKTVKLFDLRKISTALHTFDS-----HKEEVFQVGWNPKNETILASCC-LGRRL 342 (424)
Q Consensus 269 ~~~~~~~v~~i~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~-----~~~~v~~~~~sp~~~~~l~s~~-~dg~i 342 (424)
+ ........+.|+|++++++++...++.|.++|+.+ ++.+..+.. |.+.-..+ ++|++..+++++. .++.|
T Consensus 338 i-~~~~~~~d~~~~pdgr~~~va~~~sn~V~ViD~~t-~kl~~~i~vgg~~Phpg~g~~~-~~p~~g~v~~t~~~g~~~V 414 (567)
T 1qks_A 338 I-SAERFLHDGGLDGSHRYFITAANARNKLVVIDTKE-GKLVAIEDTGGQTPHPGRGANF-VHPTFGPVWATSHMGDDSV 414 (567)
T ss_dssp E-ECCSSEEEEEECTTSCEEEEEEGGGTEEEEEETTT-TEEEEEEECSSSSBCCTTCEEE-EETTTEEEEEEEBSSSSEE
T ss_pred e-eccccccCceECCCCCEEEEEeCCCCeEEEEECCC-CcEEEEEeccCcCCCCccceee-ECCCCCcEEEeCCCCCCeE
Confidence 2 23456778999999998777777889999999997 555544433 33222222 5887555666664 46899
Q ss_pred EEeeCCCCCcccCCCccCCCCCeeeEEEcCCCCCcceEEeCCCCCcEEEEEeC------CCcEEEEecCCC
Q 014472 343 MVWDLSRIDEEQTPEDAEDGPPELLFIHGGHTSKISDFSWNPCEDWVISSVAE------DNILQIWQMAEN 407 (424)
Q Consensus 343 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~------d~~i~iw~~~~~ 407 (424)
.++|......... ..+.+..+......-..+..+|+++++.++... .+.|.|+|+.+.
T Consensus 415 svid~~~~~~~~~-------~~kvv~~i~~~g~g~~~i~~~p~~~~l~v~~~~~~~~~~~~~v~v~d~~~~ 478 (567)
T 1qks_A 415 ALIGTDPEGHPDN-------AWKILDSFPALGGGSLFIKTHPNSQYLYVDATLNPEAEISGSVAVFDIKAM 478 (567)
T ss_dssp EEEECCTTTCTTT-------BTSEEEEEECSCSCCCCEECCTTCSEEEEECTTCSSHHHHTCEEEEEGGGC
T ss_pred EEecCCCCCCccc-------cCEEEEEEecCCCCCEEEEeCCCCCeEEEecCCCCCcccCceEEEEECCcc
Confidence 9999986321100 124455555443334568899999976655421 458999999876
No 185
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.56 E-value=1.7e-12 Score=117.60 Aligned_cols=201 Identities=10% Similarity=0.091 Sum_probs=146.5
Q ss_pred cCCceeEEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEE---------ecCCCCeeeEEecC-CCCce
Q 014472 124 HDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRL---------RGHSTEGYGLSWSK-FKEGH 193 (424)
Q Consensus 124 h~~~v~~i~~~p~~~~~latg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~---------~~h~~~v~~l~~~~-~~~~~ 193 (424)
+-..+..++++|++. ++++...++.|++|+.... ......+ .++-....+|+++| ++. +
T Consensus 89 ~~~~p~gia~d~~g~-l~v~d~~~~~v~~~~~~g~---------~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~-l 157 (329)
T 3fvz_A 89 LFYLPHGLSIDTDGN-YWVTDVALHQVFKLDPHSK---------EGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGA-V 157 (329)
T ss_dssp TCSSEEEEEECTTSC-EEEEETTTTEEEEECTTCS---------SCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCC-E
T ss_pred ccCCceEEEECCCCC-EEEEECCCCEEEEEeCCCC---------eEEEEEecccCCCCCCccccCCCcEEEEeCCCCe-E
Confidence 445789999999887 8888888999999997651 1123333 23445688999999 554 6
Q ss_pred EEEEe-CCCcEEEEeCCCCCCCCcccceeeeec----------CCcceeeEEeeCCCCcEEEEEeCCCeEEEEECCCCCC
Q 014472 194 LLSGS-DDAQICLWDINAAPKNKSLEAMQIFKV----------HEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSV 262 (424)
Q Consensus 194 l~s~~-~dg~i~vwd~~~~~~~~~~~~~~~~~~----------~~~~v~~i~~~~~~~~~~~s~~~dg~i~i~d~~~~~~ 262 (424)
+++.+ .++.|++|+.. +. .+..+.. +-..+..++++|++..++++...++.|++||..+++.
T Consensus 158 yv~d~~~~~~I~~~~~~-g~------~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~ 230 (329)
T 3fvz_A 158 FVSDGYCNSRIVQFSPS-GK------FVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEF 230 (329)
T ss_dssp EEEECSSCCEEEEECTT-SC------EEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCCE
T ss_pred EEEeCCCCCeEEEEcCC-CC------EEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCcE
Confidence 66665 68999999953 31 1222211 2234789999999667888888999999999986553
Q ss_pred CCCeeEe--cccCCCeeEEEecCCCCeEEEEEe-------CCCcEEEEECCCCCCcceee---cCCCCCEEEEEEcCCCC
Q 014472 263 SKPVQSV--VAHQSEVNCLAFNPFNEWILATGS-------TDKTVKLFDLRKISTALHTF---DSHKEEVFQVGWNPKNE 330 (424)
Q Consensus 263 ~~~~~~~--~~~~~~v~~i~~~~~~~~~l~~g~-------~dg~i~iwd~~~~~~~~~~~---~~~~~~v~~~~~sp~~~ 330 (424)
+..+ ..+...+..++++| +- ++++.+ .+..|++||+.+ +..+..+ ..+...+..++++|++
T Consensus 231 ---~~~~~~~~~~~~~~~~~~~p-g~-~~~~~g~~~v~~~~~~~v~~~~~~~-g~~~~~~~~~~~~~~~p~~ia~~~dG- 303 (329)
T 3fvz_A 231 ---VREIKHASFGRNVFAISYIP-GF-LFAVNGKPYFGDQEPVQGFVMNFSS-GEIIDVFKPVRKHFDMPHDIVASEDG- 303 (329)
T ss_dssp ---EEEECCTTTTTCEEEEEEET-TE-EEEEECCCCTTCSCCCCEEEEETTT-CCEEEEECCSSSCCSSEEEEEECTTS-
T ss_pred ---EEEEeccccCCCcceeeecC-CE-EEEeCCCEEeccCCCcEEEEEEcCC-CeEEEEEcCCCCccCCeeEEEECCCC-
Confidence 4444 34566789999999 32 344433 345899999987 6777776 3567789999999999
Q ss_pred cEEEEEeCCCeEEEeeCCC
Q 014472 331 TILASCCLGRRLMVWDLSR 349 (424)
Q Consensus 331 ~~l~s~~~dg~i~iwd~~~ 349 (424)
.++++...++.|++|++..
T Consensus 304 ~lyvad~~~~~I~~~~~~~ 322 (329)
T 3fvz_A 304 TVYIGDAHTNTVWKFTLTE 322 (329)
T ss_dssp EEEEEESSSCCEEEEEEEE
T ss_pred CEEEEECCCCEEEEEeCCc
Confidence 6888999999999999864
No 186
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.54 E-value=2.2e-12 Score=116.70 Aligned_cols=236 Identities=12% Similarity=0.054 Sum_probs=158.1
Q ss_pred ceeEEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCCeeeEEecCCCCceEEEEeCCCcEEEE
Q 014472 127 EVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDDAQICLW 206 (424)
Q Consensus 127 ~v~~i~~~p~~~~~latg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vw 206 (424)
....+.+.. ..++++...++.|.+||..+ .+...++. .......+++++++. ++++...++.|.+|
T Consensus 45 ~~~~i~~~~--~~lyv~~~~~~~v~viD~~t----------~~~~~~i~-~~~~p~~i~~~~~g~-lyv~~~~~~~v~~i 110 (328)
T 3dsm_A 45 VAQSMVIRD--GIGWIVVNNSHVIFAIDINT----------FKEVGRIT-GFTSPRYIHFLSDEK-AYVTQIWDYRIFII 110 (328)
T ss_dssp CEEEEEEET--TEEEEEEGGGTEEEEEETTT----------CCEEEEEE-CCSSEEEEEEEETTE-EEEEEBSCSEEEEE
T ss_pred cceEEEEEC--CEEEEEEcCCCEEEEEECcc----------cEEEEEcC-CCCCCcEEEEeCCCe-EEEEECCCCeEEEE
Confidence 345676643 34677777789999999987 34445554 446788999988773 44554488999999
Q ss_pred eCCCCCCCCcccceeeeecCC-----cceeeEEeeCCCCcEEEEEe-CCCeEEEEECCCCCCCCCeeEecccCCCeeEEE
Q 014472 207 DINAAPKNKSLEAMQIFKVHE-----GVVEDVAWHLRHEYLFGSVG-DDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLA 280 (424)
Q Consensus 207 d~~~~~~~~~~~~~~~~~~~~-----~~v~~i~~~~~~~~~~~s~~-~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~ 280 (424)
|+.+... ...+.... .....+++ ++..++++.. .++.|.++|+.+++. +..+.. ......++
T Consensus 111 D~~t~~~------~~~i~~g~~~~~~~~p~~i~~--~~~~lyv~~~~~~~~v~viD~~t~~~---~~~i~~-g~~p~~i~ 178 (328)
T 3dsm_A 111 NPKTYEI------TGYIECPDMDMESGSTEQMVQ--YGKYVYVNCWSYQNRILKIDTETDKV---VDELTI-GIQPTSLV 178 (328)
T ss_dssp ETTTTEE------EEEEECTTCCTTTCBCCCEEE--ETTEEEEEECTTCCEEEEEETTTTEE---EEEEEC-SSCBCCCE
T ss_pred ECCCCeE------EEEEEcCCccccCCCcceEEE--ECCEEEEEcCCCCCEEEEEECCCCeE---EEEEEc-CCCccceE
Confidence 9987632 22222111 15567777 3556776654 489999999998664 333332 33467889
Q ss_pred ecCCCCeEEEEEeCC----------CcEEEEECCCCCCcceeecCC-CCCEEEEEEcCCCCcEEEEEeCCCeEEEeeCCC
Q 014472 281 FNPFNEWILATGSTD----------KTVKLFDLRKISTALHTFDSH-KEEVFQVGWNPKNETILASCCLGRRLMVWDLSR 349 (424)
Q Consensus 281 ~~~~~~~~l~~g~~d----------g~i~iwd~~~~~~~~~~~~~~-~~~v~~~~~sp~~~~~l~s~~~dg~i~iwd~~~ 349 (424)
++|+|+ +++++..+ +.|.++|..+ .+....+... ......++|+|+++. |+++.. .|.+||..+
T Consensus 179 ~~~dG~-l~v~~~~~~~~~~~~~~~~~v~~id~~t-~~v~~~~~~~~g~~p~~la~~~d~~~-lyv~~~--~v~~~d~~t 253 (328)
T 3dsm_A 179 MDKYNK-MWTITDGGYEGSPYGYEAPSLYRIDAET-FTVEKQFKFKLGDWPSEVQLNGTRDT-LYWINN--DIWRMPVEA 253 (328)
T ss_dssp ECTTSE-EEEEBCCBCTTCSSCBCCCEEEEEETTT-TEEEEEEECCTTCCCEEEEECTTSCE-EEEESS--SEEEEETTC
T ss_pred EcCCCC-EEEEECCCccCCccccCCceEEEEECCC-CeEEEEEecCCCCCceeEEEecCCCE-EEEEcc--EEEEEECCC
Confidence 999887 56555544 7899999987 5555555432 347899999999875 444443 799999977
Q ss_pred CCcccCCCccCCCCCeeeEEEcCCCCCcceEEeCCCCCcEEEEE----eCCCcEEEEecC
Q 014472 350 IDEEQTPEDAEDGPPELLFIHGGHTSKISDFSWNPCEDWVISSV----AEDNILQIWQMA 405 (424)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~----~~d~~i~iw~~~ 405 (424)
+..... .. ...+......++++|++..++++. ..++.|.+|+..
T Consensus 254 ~~~~~~---------~~---~~~~~~~p~gi~vdp~~g~lyva~~~~y~~~~~V~v~d~~ 301 (328)
T 3dsm_A 254 DRVPVR---------PF---LEFRDTKYYGLTVNPNNGEVYVADAIDYQQQGIVYRYSPQ 301 (328)
T ss_dssp SSCCSS---------CS---BCCCSSCEEEEEECTTTCCEEEEECTTSSSEEEEEEECTT
T ss_pred Cceeee---------ee---ecCCCCceEEEEEcCCCCeEEEEcccccccCCEEEEECCC
Confidence 542110 00 011134578899999655578887 678999999998
No 187
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.54 E-value=2.2e-12 Score=114.25 Aligned_cols=205 Identities=16% Similarity=0.136 Sum_probs=141.3
Q ss_pred CCCCeeeEEecCCCCceEEEEeCCCcEEEEeCCCCCCCCcccceeeeecCCcceeeEEeeCCCCcEEEEEeC-CCeEEEE
Q 014472 177 HSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGD-DQYLLIW 255 (424)
Q Consensus 177 h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~~s~~~-dg~i~i~ 255 (424)
+-..+.++++++++. ++++...++.|.+||.... ....+........+...+..+++.+.+..++++... ++.|.+|
T Consensus 28 ~~~~p~~v~~~~~g~-l~v~~~~~~~i~~~d~~g~-~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~~~~~i~~~ 105 (286)
T 1q7f_A 28 QFTEPSGVAVNAQND-IIVADTNNHRIQIFDKEGR-FKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQIQIY 105 (286)
T ss_dssp CBSCEEEEEECTTCC-EEEEEGGGTEEEEECTTSC-EEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGGGCEEEEE
T ss_pred ccCCCceEEECCCCC-EEEEECCCCEEEEECCCCc-EEEEecccCCCcccccCceEEEEEcCCCeEEEEcCCCCCEEEEE
Confidence 445688999999876 7777788999999998632 111110000001234578899995433456656543 8899999
Q ss_pred ECCCCCCCCCeeEec-ccCCCeeEEEecCCCCeEEEEEeCCCcEEEEECCCCCCcceeec--CCCCCEEEEEEcCCCCcE
Q 014472 256 DLRTPSVSKPVQSVV-AHQSEVNCLAFNPFNEWILATGSTDKTVKLFDLRKISTALHTFD--SHKEEVFQVGWNPKNETI 332 (424)
Q Consensus 256 d~~~~~~~~~~~~~~-~~~~~v~~i~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~--~~~~~v~~~~~sp~~~~~ 332 (424)
|. ++.. +..+. .+...+..++++|++. ++++...++.|.+||.. +..+..+. .+...+..++++|++. +
T Consensus 106 d~-~g~~---~~~~~~~~~~~~~~i~~~~~g~-l~v~~~~~~~i~~~~~~--g~~~~~~~~~~~~~~p~~i~~~~~g~-l 177 (286)
T 1q7f_A 106 NQ-YGQF---VRKFGATILQHPRGVTVDNKGR-IIVVECKVMRVIIFDQN--GNVLHKFGCSKHLEFPNGVVVNDKQE-I 177 (286)
T ss_dssp CT-TSCE---EEEECTTTCSCEEEEEECTTSC-EEEEETTTTEEEEECTT--SCEEEEEECTTTCSSEEEEEECSSSE-E
T ss_pred CC-CCcE---EEEecCccCCCceEEEEeCCCC-EEEEECCCCEEEEEcCC--CCEEEEeCCCCccCCcEEEEECCCCC-E
Confidence 94 4332 33332 2345789999999986 77777778999999965 34444443 3446789999999985 7
Q ss_pred EEEEeCCCeEEEeeCCCCCcccCCCccCCCCCeeeEEEcC--CCCCcceEEeCCCCCcEEEEEeCCC-cEEEEecCCC
Q 014472 333 LASCCLGRRLMVWDLSRIDEEQTPEDAEDGPPELLFIHGG--HTSKISDFSWNPCEDWVISSVAEDN-ILQIWQMAEN 407 (424)
Q Consensus 333 l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~--h~~~v~~~~~~~~~~~~l~s~~~d~-~i~iw~~~~~ 407 (424)
+++...++.|.+|+... ..+..+.. +...+..++++++|. ++++...++ .|.+|+....
T Consensus 178 ~v~~~~~~~i~~~~~~g---------------~~~~~~~~~g~~~~p~~i~~d~~G~-l~v~~~~~~~~i~~~~~~g~ 239 (286)
T 1q7f_A 178 FISDNRAHCVKVFNYEG---------------QYLRQIGGEGITNYPIGVGINSNGE-ILIADNHNNFNLTIFTQDGQ 239 (286)
T ss_dssp EEEEGGGTEEEEEETTC---------------CEEEEESCTTTSCSEEEEEECTTCC-EEEEECSSSCEEEEECTTSC
T ss_pred EEEECCCCEEEEEcCCC---------------CEEEEEccCCccCCCcEEEECCCCC-EEEEeCCCCEEEEEECCCCC
Confidence 77777889999999753 23333433 235688999999998 788877775 9999997654
No 188
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.53 E-value=1.4e-12 Score=118.90 Aligned_cols=224 Identities=9% Similarity=0.102 Sum_probs=138.6
Q ss_pred CceeEEEecCCCCcEEEEE--------ecCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCCeeeEEecCCCCceEEEE
Q 014472 126 GEVNRARYMPQNPFLIATK--------TVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSG 197 (424)
Q Consensus 126 ~~v~~i~~~p~~~~~latg--------~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~ 197 (424)
..+..+++ +|+.++.+. ..++.|.+|++.. + . ...+ ..+..++|+|+|. .|+.+
T Consensus 15 ~~~~~~~~--dG~~i~~~~~~~~~~~~~~~~~l~~~d~~~--------~--~-~~~l----~~~~~~~~SpDg~-~la~~ 76 (347)
T 2gop_A 15 AYLSDPRT--KGELVAYVLTKANLKDNKYENTIVIENLKN--------N--A-RRFI----ENATMPRISPDGK-KIAFM 76 (347)
T ss_dssp CEEEEEEE--ETTEEEEEEEEEETTTTEEEEEEEEEETTT--------C--C-EEEE----ESCEEEEECTTSS-EEEEE
T ss_pred EEcccceE--CCcEEEEEEeecCcccCCccceEEEEeCCC--------C--c-eEEc----ccCCCeEECCCCC-EEEEE
Confidence 44566677 676444332 2257899999876 1 1 2233 4678899999998 56665
Q ss_pred eCC---C--cEEEEeCCCCCCCCcccceeeeecCCcceeeEEeeCCCCcEEEEEeC------------------------
Q 014472 198 SDD---A--QICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGD------------------------ 248 (424)
Q Consensus 198 ~~d---g--~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~~s~~~------------------------ 248 (424)
+.+ + .|.+|++.++. ... +..+.. +..++|+|+++.++.++..
T Consensus 77 ~~~~~~~~~~l~~~~~~~g~------~~~-l~~~~~-~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 148 (347)
T 2gop_A 77 RANEEKKVSEIWVADLETLS------SKK-ILEAKN-IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFD 148 (347)
T ss_dssp EEETTTTEEEEEEEETTTTE------EEE-EEEESE-EEEEEECTTSSEEEEEEECCCC---------CCCC--------
T ss_pred EeccCCCcceEEEEECCCCc------eEE-EEcCCC-ccceeECCCCCEEEEEEccCCCcCCcEEEcccceeecCccccc
Confidence 543 3 37777886542 112 222334 8999999999876644432
Q ss_pred --CCeEEEEECCCCCCCCCeeEecccCCCeeEEEecCCCCeEEEEEeCCC-------cEEEEECCCCCCcceeecCCCCC
Q 014472 249 --DQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATGSTDK-------TVKLFDLRKISTALHTFDSHKEE 319 (424)
Q Consensus 249 --dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~l~~g~~dg-------~i~iwd~~~~~~~~~~~~~~~~~ 319 (424)
...|.+||+.+++. +..+.. . .+..++|+|++ +++++..++ ...||.+.. +. ...+..+ ..
T Consensus 149 ~~~~~l~~~d~~~~~~---~~~l~~-~-~~~~~~~spdg--~~~~~~~~~~~~~~~~~~~l~~~d~-~~-~~~l~~~-~~ 218 (347)
T 2gop_A 149 GEKTTFWIFDTESEEV---IEEFEK-P-RFSSGIWHRDK--IVVNVPHREIIPQYFKFWDIYIWED-GK-EEKMFEK-VS 218 (347)
T ss_dssp -CEEEEEEEETTTTEE---EEEEEE-E-TTCEEEEETTE--EEEEEECCCSSCCSSCCEEEEEEET-TE-EEEEEEE-ES
T ss_pred CccceEEEEECCCCeE---EeeecC-C-CcccccCCCCe--EEEEEecccccccccccccEEEeCC-Cc-eEEeccC-cc
Confidence 25799999987552 133333 3 78899999998 566665542 344554443 33 3333334 45
Q ss_pred EEEEEEcCCCCcEEEEEeCC-------CeEEEeeCCCCCcccCCCccCCCCCeeeEEEcCCCCCcce-EEeCCCCCcEEE
Q 014472 320 VFQVGWNPKNETILASCCLG-------RRLMVWDLSRIDEEQTPEDAEDGPPELLFIHGGHTSKISD-FSWNPCEDWVIS 391 (424)
Q Consensus 320 v~~~~~sp~~~~~l~s~~~d-------g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~-~~~~~~~~~~l~ 391 (424)
+..+ +|+|+.+++++..+ ..|.+|| .+ +......+|...+.. +.|+ ++ +++
T Consensus 219 ~~~~--spdg~~l~~~~~~~~~~~~~~~~l~~~d--~~--------------~~~~l~~~~~~~~~~~~~~s-dg--~~~ 277 (347)
T 2gop_A 219 FYAV--DSDGERILLYGKPEKKYMSEHNKLYIYD--GK--------------EVMGILDEVDRGVGQAKIKD-GK--VYF 277 (347)
T ss_dssp EEEE--EECSSCEEEEECCSSSCCCSSCEEEEEC--SS--------------CEEESSTTCCSEEEEEEEET-TE--EEE
T ss_pred eeeE--CCCCCEEEEEEccccCCccccceEEEEC--CC--------------ceEeccccCCcccCCccEEc-Cc--EEE
Confidence 5544 99997644444332 3677777 32 112222345566776 8999 76 788
Q ss_pred EEeCCCcEEEEecCCC
Q 014472 392 SVAEDNILQIWQMAEN 407 (424)
Q Consensus 392 s~~~d~~i~iw~~~~~ 407 (424)
+++.++.++|| +.++
T Consensus 278 ~~~~~~~~~l~-~~~g 292 (347)
T 2gop_A 278 TLFEEGSVNLY-IWDG 292 (347)
T ss_dssp EEEETTEEEEE-EESS
T ss_pred EEecCCcEEEE-EcCC
Confidence 88999999999 8743
No 189
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.52 E-value=7.1e-11 Score=104.93 Aligned_cols=242 Identities=4% Similarity=-0.055 Sum_probs=159.1
Q ss_pred cCCceeEEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCCeeeEEecCCCCceEEEEeCCCcE
Q 014472 124 HDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDDAQI 203 (424)
Q Consensus 124 h~~~v~~i~~~p~~~~~latg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i 203 (424)
+...+.++++.+++. ++++...++.|..|+... ......+......+.++++.+++. ++++...++.|
T Consensus 55 ~~~~~~~i~~~~~g~-l~v~~~~~~~i~~~~~~g----------~~~~~~~~~~~~~~~~i~~~~~g~-l~v~~~~~~~i 122 (299)
T 2z2n_A 55 PDAKVMCLTISSDGE-VWFTENAANKIGRITKKG----------IIKEYTLPNPDSAPYGITEGPNGD-IWFTEMNGNRI 122 (299)
T ss_dssp TTCCEEEEEECTTSC-EEEEETTTTEEEEECTTS----------CEEEEECSSTTCCEEEEEECTTSC-EEEEETTTTEE
T ss_pred ccCceeeEEECCCCC-EEEeCCCCCeEEEECCCC----------cEEEEeCCCcCCCceeeEECCCCC-EEEEecCCceE
Confidence 446788999999886 666666678899998653 111111222455788999998775 66666668899
Q ss_pred EEEeCCCCCCCCcccceeeeecCCcceeeEEeeCCCCcEEEEEeCCCeEEEEECCCCCCCCCeeEecccCCCeeEEEecC
Q 014472 204 CLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNP 283 (424)
Q Consensus 204 ~vwd~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~~ 283 (424)
.+||. ++.. .. .........+..+++.+++. ++++...++.|..||. ++.. . ..........+..+++++
T Consensus 123 ~~~d~-~g~~----~~-~~~~~~~~~~~~i~~~~~g~-l~v~~~~~~~i~~~~~-~g~~-~-~~~~~~~~~~~~~i~~~~ 192 (299)
T 2z2n_A 123 GRITD-DGKI----RE-YELPNKGSYPSFITLGSDNA-LWFTENQNNAIGRITE-SGDI-T-EFKIPTPASGPVGITKGN 192 (299)
T ss_dssp EEECT-TCCE----EE-EECSSTTCCEEEEEECTTSC-EEEEETTTTEEEEECT-TCCE-E-EEECSSTTCCEEEEEECT
T ss_pred EEECC-CCCE----EE-ecCCCCCCCCceEEEcCCCC-EEEEeCCCCEEEEEcC-CCcE-E-EeeCCCCCCcceeEEECC
Confidence 99998 3321 11 11122345688999999885 6666666789999998 5432 0 111223345688999999
Q ss_pred CCCeEEEEEeCCCcEEEEECCCCCCcce-eecCCCCCEEEEEEcCCCCcEEEEEeCCCeEEEeeCCCCCcccCCCccCCC
Q 014472 284 FNEWILATGSTDKTVKLFDLRKISTALH-TFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPEDAEDG 362 (424)
Q Consensus 284 ~~~~~l~~g~~dg~i~iwd~~~~~~~~~-~~~~~~~~v~~~~~sp~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~ 362 (424)
++. ++++...++.|.+||. + +.... ....+...+.++++++++. ++++...++.|..||.. +.
T Consensus 193 ~g~-l~v~~~~~~~i~~~~~-~-g~~~~~~~~~~~~~~~~i~~~~~g~-l~v~~~~~~~i~~~d~~-g~----------- 256 (299)
T 2z2n_A 193 DDA-LWFVEIIGNKIGRITT-S-GEITEFKIPTPNARPHAITAGAGID-LWFTEWGANKIGRLTSN-NI----------- 256 (299)
T ss_dssp TSS-EEEEETTTTEEEEECT-T-CCEEEEECSSTTCCEEEEEECSTTC-EEEEETTTTEEEEEETT-TE-----------
T ss_pred CCC-EEEEccCCceEEEECC-C-CcEEEEECCCCCCCceeEEECCCCC-EEEeccCCceEEEECCC-Cc-----------
Confidence 887 6666666789999998 4 33222 2333456899999999985 66666577889999983 21
Q ss_pred CCeeeEEEcCCCCCcceEEeCCCCCcEEEEEeCCCcEEEEecCCCC
Q 014472 363 PPELLFIHGGHTSKISDFSWNPCEDWVISSVAEDNILQIWQMAENI 408 (424)
Q Consensus 363 ~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~ 408 (424)
........+...+.++++ +++. ++++.+ .+.|..+++.++.
T Consensus 257 --~~~~~~~~~~~~~~~i~~-~~g~-l~v~~~-~~~l~~~~~~~~~ 297 (299)
T 2z2n_A 257 --IEEYPIQIKSAEPHGICF-DGET-IWFAME-CDKIGKLTLIKDN 297 (299)
T ss_dssp --EEEEECSSSSCCEEEEEE-CSSC-EEEEET-TTEEEEEEEC---
T ss_pred --eEEEeCCCCCCccceEEe-cCCC-EEEEec-CCcEEEEEcCccc
Confidence 111222344566899999 8888 666654 5678888877654
No 190
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.52 E-value=1.6e-12 Score=118.54 Aligned_cols=180 Identities=13% Similarity=0.077 Sum_probs=127.5
Q ss_pred ceeEEEecCCCCcEEEEEecCCeEEEEeCCCCCCCC-CCCCCCCCcEEEecCCCCeeeEEecCCCCceEEEEeCCCcEEE
Q 014472 127 EVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKP-PLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDDAQICL 205 (424)
Q Consensus 127 ~v~~i~~~p~~~~~latg~~dg~v~iwd~~~~~~~~-~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~v 205 (424)
.++.+++++... ++++|+.+ .+.+|++....... .......+.... .+.. |+.|+| ++. +|+++ .++.|++
T Consensus 39 ~~nlLais~~~g-ll~a~~~~-~l~v~~~~~l~~~~~~~~~~~~~~~~~-~lp~-V~~l~f--d~~-~L~v~-~~~~l~v 110 (388)
T 1xip_A 39 SLQNLDISNSKS-LFVAASGS-KAVVGELQLLRDHITSDSTPLTFKWEK-EIPD-VIFVCF--HGD-QVLVS-TRNALYS 110 (388)
T ss_dssp CCBCEEEETTTT-EEEEEETT-EEEEEEHHHHHHHHHSSSCCCCCSEEE-ECTT-EEEEEE--ETT-EEEEE-ESSEEEE
T ss_pred cccEEEEcCCCC-EEEEeCCC-EEEEEEhhHhhhhhccccccccceEEe-eCCC-eeEEEE--CCC-EEEEE-cCCcEEE
Confidence 589999999876 78888877 56669976421000 000012333333 4666 999999 666 67777 8899999
Q ss_pred EeCCCCCCCCcccceeeeecCCcceeeEEeeCCCCcEEEEEeCCCeEEEEECCCCCCCCCeeEecccCCCeeEEEecCCC
Q 014472 206 WDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFN 285 (424)
Q Consensus 206 wd~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~~~~ 285 (424)
||+.+... ......|...+.++.+.+. . ++++..||.|.+||+..+.. . . +...|+|++|+|.|
T Consensus 111 ~dv~sl~~------~~~~~~~~~~v~~i~~~~p--~-~av~~~dG~L~v~dl~~~~~---~-~---~~~~Vs~v~WSpkG 174 (388)
T 1xip_A 111 LDLEELSE------FRTVTSFEKPVFQLKNVNN--T-LVILNSVNDLSALDLRTKST---K-Q---LAQNVTSFDVTNSQ 174 (388)
T ss_dssp EESSSTTC------EEEEEECSSCEEEEEECSS--E-EEEEETTSEEEEEETTTCCE---E-E---EEESEEEEEECSSE
T ss_pred EEchhhhc------cCccceeecceeeEEecCC--C-EEEEECCCCEEEEEccCCcc---c-c---ccCCceEEEEcCCc
Confidence 99976532 2234456777888877654 3 66889999999999997653 2 1 45689999999988
Q ss_pred CeEEEEEeCCCcEEEEECCCCCCc--ceee------c---CCCCCEEEEEEcCCCCcEEEE
Q 014472 286 EWILATGSTDKTVKLFDLRKISTA--LHTF------D---SHKEEVFQVGWNPKNETILAS 335 (424)
Q Consensus 286 ~~~l~~g~~dg~i~iwd~~~~~~~--~~~~------~---~~~~~v~~~~~sp~~~~~l~s 335 (424)
++.|..||++++|+... ... ..++ . +|...|.++.|.+++. +|++
T Consensus 175 ---~~vg~~dg~i~~~~~~~-~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~~-flv~ 230 (388)
T 1xip_A 175 ---LAVLLKDRSFQSFAWRN-GEMEKQFEFSLPSELEELPVEEYSPLSVTILSPQD-FLAV 230 (388)
T ss_dssp ---EEEEETTSCEEEEEEET-TEEEEEEEECCCHHHHTSCTTTSEEEEEEESSSSE-EEEE
T ss_pred ---eEEEEcCCcEEEEcCCC-ccccccceecCCcccccccCCCeeEEEEEEecCCe-EEEE
Confidence 56788999999998876 332 4444 2 4788999999999885 4554
No 191
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.52 E-value=3.7e-11 Score=116.04 Aligned_cols=229 Identities=12% Similarity=0.089 Sum_probs=161.8
Q ss_pred cEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCCeeeEEecCCCCceEEEEeCCCcEEEEeCC--CCCCCCc
Q 014472 139 FLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDDAQICLWDIN--AAPKNKS 216 (424)
Q Consensus 139 ~~latg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~--~~~~~~~ 216 (424)
.++++...++.|.++|..+ .+....+. ....+..+.++|++. ++++++.|+.|.+||+. +.
T Consensus 168 ~~~V~~~~~~~V~viD~~t----------~~v~~~i~-~g~~p~~v~~SpDGr-~lyv~~~dg~V~viD~~~~t~----- 230 (567)
T 1qks_A 168 LFSVTLRDAGQIALIDGST----------YEIKTVLD-TGYAVHISRLSASGR-YLFVIGRDGKVNMIDLWMKEP----- 230 (567)
T ss_dssp EEEEEETTTTEEEEEETTT----------CCEEEEEE-CSSCEEEEEECTTSC-EEEEEETTSEEEEEETTSSSC-----
T ss_pred eEEEEeCCCCeEEEEECCC----------CeEEEEEe-CCCCccceEECCCCC-EEEEEcCCCeEEEEECCCCCC-----
Confidence 4677778899999999987 34444454 334577999999998 68888899999999995 33
Q ss_pred ccceeeeecCCcceeeEEee----CCCCcEEEEEeCCCeEEEEECCCCCCCCCeeEecc----------cCC-CeeEEEe
Q 014472 217 LEAMQIFKVHEGVVEDVAWH----LRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVA----------HQS-EVNCLAF 281 (424)
Q Consensus 217 ~~~~~~~~~~~~~v~~i~~~----~~~~~~~~s~~~dg~i~i~d~~~~~~~~~~~~~~~----------~~~-~v~~i~~ 281 (424)
+.+..+.. ......++|+ |++++++++...+++|.++|..+.+. +..+.. |.. .+..+..
T Consensus 231 -~~v~~i~~-G~~P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~---~~~i~~~~~~~~~~~~~p~~rva~i~~ 305 (567)
T 1qks_A 231 -TTVAEIKI-GSEARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEP---KKIQSTRGMTYDEQEYHPEPRVAAILA 305 (567)
T ss_dssp -CEEEEEEC-CSEEEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCE---EEEEECCEECTTTCCEESCCCEEEEEE
T ss_pred -cEeEEEec-CCCCceeEEccccCCCCCEEEEEEccCCeEEEEECCCCcE---EEEEeccccccccccccCCCceEEEEE
Confidence 22333333 3346789999 69999988888889999999888553 443321 222 6788889
Q ss_pred cCCCCeEEEEEeCCCcEEEEECCCCCCc-ceeecCCCCCEEEEEEcCCCCcEEEEEeCCCeEEEeeCCCCCcccCCCccC
Q 014472 282 NPFNEWILATGSTDKTVKLFDLRKISTA-LHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPEDAE 360 (424)
Q Consensus 282 ~~~~~~~l~~g~~dg~i~iwd~~~~~~~-~~~~~~~~~~v~~~~~sp~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~ 360 (424)
+++++.+++....+|.|.++|....... +..+ ........+.|+|+++++++++..++.|.++|+.++.
T Consensus 306 s~~~~~~vv~~~~~g~v~~vd~~~~~~~~v~~i-~~~~~~~d~~~~pdgr~~~va~~~sn~V~ViD~~t~k--------- 375 (567)
T 1qks_A 306 SHYRPEFIVNVKETGKILLVDYTDLNNLKTTEI-SAERFLHDGGLDGSHRYFITAANARNKLVVIDTKEGK--------- 375 (567)
T ss_dssp CSSSSEEEEEETTTTEEEEEETTCSSEEEEEEE-ECCSSEEEEEECTTSCEEEEEEGGGTEEEEEETTTTE---------
T ss_pred cCCCCEEEEEecCCCeEEEEecCCCccceeeee-eccccccCceECCCCCEEEEEeCCCCeEEEEECCCCc---------
Confidence 9988877777777899999998763322 2222 2345677899999998777777778899999998753
Q ss_pred CCCCeeeEEEc-----CCCCCcceEE-eCCCCCcEEEEEe-CCCcEEEEecCC
Q 014472 361 DGPPELLFIHG-----GHTSKISDFS-WNPCEDWVISSVA-EDNILQIWQMAE 406 (424)
Q Consensus 361 ~~~~~~~~~~~-----~h~~~v~~~~-~~~~~~~~l~s~~-~d~~i~iw~~~~ 406 (424)
++.... .|.+ ..+. ++|++..+++++. .++.|.+++..+
T Consensus 376 -----l~~~i~vgg~~Phpg--~g~~~~~p~~g~v~~t~~~g~~~Vsvid~~~ 421 (567)
T 1qks_A 376 -----LVAIEDTGGQTPHPG--RGANFVHPTFGPVWATSHMGDDSVALIGTDP 421 (567)
T ss_dssp -----EEEEEECSSSSBCCT--TCEEEEETTTEEEEEEEBSSSSEEEEEECCT
T ss_pred -----EEEEEeccCcCCCCc--cceeeECCCCCcEEEeCCCCCCeEEEecCCC
Confidence 222221 1322 2333 5787554666654 468999999876
No 192
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.52 E-value=2.2e-11 Score=108.56 Aligned_cols=233 Identities=10% Similarity=0.055 Sum_probs=155.0
Q ss_pred CceeEEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCCeeeEEecCCCCceEEEEeCCCcEEE
Q 014472 126 GEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDDAQICL 205 (424)
Q Consensus 126 ~~v~~i~~~p~~~~~latg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~v 205 (424)
.-.-+..|+|++..++++....+.|+.|+... . . ...+ .....+.++++++++. +++ +. ++.|.+
T Consensus 13 ~~~Egp~w~~~~~~l~~~d~~~~~i~~~d~~~--------~--~-~~~~-~~~~~~~~i~~~~dG~-l~v-~~-~~~l~~ 77 (297)
T 3g4e_A 13 RCGESPVWEEVSNSLLFVDIPAKKVCRWDSFT--------K--Q-VQRV-TMDAPVSSVALRQSGG-YVA-TI-GTKFCA 77 (297)
T ss_dssp SBEEEEEEETTTTEEEEEETTTTEEEEEETTT--------C--C-EEEE-ECSSCEEEEEEBTTSS-EEE-EE-TTEEEE
T ss_pred ccccCCeEECCCCEEEEEECCCCEEEEEECCC--------C--c-EEEE-eCCCceEEEEECCCCC-EEE-EE-CCeEEE
Confidence 34557899997777888888889999999876 1 1 2222 3456799999999887 444 44 568999
Q ss_pred EeCCCCCCCCcccceeeee--cCCcceeeEEeeCCCCcEEEEEeC---------CCeEEEEECCCCCCCCCeeEecccCC
Q 014472 206 WDINAAPKNKSLEAMQIFK--VHEGVVEDVAWHLRHEYLFGSVGD---------DQYLLIWDLRTPSVSKPVQSVVAHQS 274 (424)
Q Consensus 206 wd~~~~~~~~~~~~~~~~~--~~~~~v~~i~~~~~~~~~~~s~~~---------dg~i~i~d~~~~~~~~~~~~~~~~~~ 274 (424)
||..++.. ..+.... .....+++++++|++. ++++... ...-.||.+..... +..+.....
T Consensus 78 ~d~~~g~~----~~~~~~~~~~~~~~~~di~~d~dG~-l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~---~~~~~~~~~ 149 (297)
T 3g4e_A 78 LNWKEQSA----VVLATVDNDKKNNRFNDGKVDPAGR-YFAGTMAEETAPAVLERHQGALYSLFPDHH---VKKYFDQVD 149 (297)
T ss_dssp EETTTTEE----EEEEECCTTCSSEEEEEEEECTTSC-EEEEEEECCSBTTBCCTTCEEEEEECTTSC---EEEEEEEES
T ss_pred EECCCCcE----EEEEecCCCCCCCCCCCEEECCCCC-EEEecCCcccccccccCCCcEEEEEECCCC---EEEEeeccc
Confidence 99876521 1111111 1234688999999997 4444322 12234454433221 223333445
Q ss_pred CeeEEEecCCCCeEEEEEeCCCcEEEEECC-CCCCc-----ceeecCCCCCEEEEEEcCCCCcEEEEEeCCCeEEEeeCC
Q 014472 275 EVNCLAFNPFNEWILATGSTDKTVKLFDLR-KISTA-----LHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLS 348 (424)
Q Consensus 275 ~v~~i~~~~~~~~~l~~g~~dg~i~iwd~~-~~~~~-----~~~~~~~~~~v~~~~~sp~~~~~l~s~~~dg~i~iwd~~ 348 (424)
..+.++|+|+++.++++.+.++.|.+||+. ..+.. +..+..+......++++++|. +.++...++.|..||..
T Consensus 150 ~pngi~~spdg~~lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~-lwva~~~~~~v~~~d~~ 228 (297)
T 3g4e_A 150 ISNGLDWSLDHKIFYYIDSLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGK-LWVACYNGGRVIRLDPV 228 (297)
T ss_dssp BEEEEEECTTSCEEEEEEGGGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSC-EEEEEETTTEEEEECTT
T ss_pred cccceEEcCCCCEEEEecCCCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCC-EEEEEcCCCEEEEEcCC
Confidence 678999999998777777778999999974 21221 222333345788999999994 77777778889999987
Q ss_pred CCCcccCCCccCCCCCeeeEEEcCCCCCcceEEeC-CCCCcEEEEEeCC
Q 014472 349 RIDEEQTPEDAEDGPPELLFIHGGHTSKISDFSWN-PCEDWVISSVAED 396 (424)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~-~~~~~~l~s~~~d 396 (424)
++ +++..+..+...+++++|. |+++.|+++...+
T Consensus 229 tG--------------~~~~~i~~p~~~~t~~~f~g~d~~~L~vt~~~~ 263 (297)
T 3g4e_A 229 TG--------------KRLQTVKLPVDKTTSCCFGGKNYSEMYVTCARD 263 (297)
T ss_dssp TC--------------CEEEEEECSSSBEEEEEEESGGGCEEEEEEBCT
T ss_pred Cc--------------eEEEEEECCCCCceEEEEeCCCCCEEEEEcCCc
Confidence 64 4455555555679999998 8888677776644
No 193
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.51 E-value=2.6e-11 Score=112.91 Aligned_cols=240 Identities=10% Similarity=0.034 Sum_probs=160.3
Q ss_pred CceeEEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCCeeeEEecCCCCceEEEEeCCC--cE
Q 014472 126 GEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDDA--QI 203 (424)
Q Consensus 126 ~~v~~i~~~p~~~~~latg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg--~i 203 (424)
.....|+|+|++. ++++...++.|++||... .. ...+........ ++|++++. .|+++..++ .|
T Consensus 131 ~~P~~la~d~~g~-lyv~d~~~~~I~~id~~~----------g~-~~~~~~~~~~~~-ia~~~~g~-~l~~~d~~~~~~I 196 (409)
T 3hrp_A 131 KYMWGIAAVGNNT-VLAYQRDDPRVRLISVDD----------NK-VTTVHPGFKGGK-PAVTKDKQ-RVYSIGWEGTHTV 196 (409)
T ss_dssp CCEEEEEECSTTE-EEEEETTTTEEEEEETTT----------TE-EEEEEETCCBCB-CEECTTSS-EEEEEBSSTTCEE
T ss_pred CCceEEEEeCCCC-EEEEecCCCcEEEEECCC----------CE-EEEeeccCCCCc-eeEecCCC-cEEEEecCCCceE
Confidence 4678999999886 777777789999999876 12 222322333344 99999887 677777655 78
Q ss_pred EEEeCCCCCCCCcccceeeeec-CCcceeeEEeeCCCCcEEEEEeCCCeEEEEECCCCCCCCCeeE--ecccCCC--eeE
Q 014472 204 CLWDINAAPKNKSLEAMQIFKV-HEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQS--VVAHQSE--VNC 278 (424)
Q Consensus 204 ~vwd~~~~~~~~~~~~~~~~~~-~~~~v~~i~~~~~~~~~~~s~~~dg~i~i~d~~~~~~~~~~~~--~~~~~~~--v~~ 278 (424)
.+++....... ..+..... ....+.+++++|++..+++ +..++.|+.||..+... ..+.. ...+... ...
T Consensus 197 ~~~d~~~~~~~---~~~g~~~~~~~~~p~~iav~p~~g~lyv-~d~~~~I~~~d~~~~~~-~~~~~~~~~g~~~~~P~~~ 271 (409)
T 3hrp_A 197 YVYMKASGWAP---TRIGQLGSTFSGKIGAVALDETEEWLYF-VDSNKNFGRFNVKTQEV-TLIKQLELSGSLGTNPGPY 271 (409)
T ss_dssp EEEEGGGTTCE---EEEEECCTTSCSCCCBCEECTTSSEEEE-ECTTCEEEEEETTTCCE-EEEEECCCCSCCCCSSCCE
T ss_pred EEEEcCCCcee---EEeeeccchhcCCcEEEEEeCCCCeEEE-EECCCcEEEEECCCCCE-EEEecccccCCCCCCcccc
Confidence 88887654221 11111112 4466789999996666765 66788999999986542 11100 1111111 239
Q ss_pred EEecCCCCeEEEEEeCCCcEEEEECCCCCCcceeecCCC---------------CCEEEEEEcCCCCcEEEEEe-CCCeE
Q 014472 279 LAFNPFNEWILATGSTDKTVKLFDLRKISTALHTFDSHK---------------EEVFQVGWNPKNETILASCC-LGRRL 342 (424)
Q Consensus 279 i~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~---------------~~v~~~~~sp~~~~~l~s~~-~dg~i 342 (424)
++|+|++.+++++-..++.|+.||... . +..+.++. .....++++|++. ++++-. .++.|
T Consensus 272 ia~~p~~g~lyv~d~~~~~I~~~~~~g--~-~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~-lyvad~~~~~~I 347 (409)
T 3hrp_A 272 LIYYFVDSNFYMSDQNLSSVYKITPDG--E-CEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGN-FYIVDGFKGYCL 347 (409)
T ss_dssp EEEETTTTEEEEEETTTTEEEEECTTC--C-EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCC-EEEEETTTTCEE
T ss_pred EEEeCCCCEEEEEeCCCCEEEEEecCC--C-EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCC-EEEEeCCCCCEE
Confidence 999997666777777888999998764 2 33333322 3578999999996 777777 78899
Q ss_pred EEeeCCCCCcccCCCccCCCCCeeeEEEcCC---------------CCCcceEEeCCCCCcEEEEEeCCCcEEEEec
Q 014472 343 MVWDLSRIDEEQTPEDAEDGPPELLFIHGGH---------------TSKISDFSWNPCEDWVISSVAEDNILQIWQM 404 (424)
Q Consensus 343 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h---------------~~~v~~~~~~~~~~~~l~s~~~d~~i~iw~~ 404 (424)
+.|++..+. +..+.++ -.....+++++++. ++++-..++.|+.+++
T Consensus 348 ~~~~~~~G~---------------v~~~~g~~~~~g~~~g~~~~~~~~~P~giavd~~g~-lyVad~~n~~Ir~i~~ 408 (409)
T 3hrp_A 348 RKLDILDGY---------------VSTVAGQVDVASQIDGTPLEATFNYPYDICYDGEGG-YWIAEAWGKAIRKYAV 408 (409)
T ss_dssp EEEETTTTE---------------EEEEEECTTCBSCCCBSTTTCCBSSEEEEEECSSSE-EEEEESTTCEEEEEEE
T ss_pred EEEECCCCE---------------EEEEeCCCCCCCcCCCChhceEeCCceEEEEcCCCC-EEEEECCCCeEEEEEe
Confidence 999976542 1111111 23578899999977 7888888888988775
No 194
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.49 E-value=1.3e-11 Score=124.43 Aligned_cols=250 Identities=10% Similarity=0.041 Sum_probs=153.9
Q ss_pred CceeEEEecCCCCcEEEEEec-CC----eEEEEeCCCCCCCCCCCCCCCCcEEEecCCCCeeeEEecCCCCceEEEEeCC
Q 014472 126 GEVNRARYMPQNPFLIATKTV-SA----EVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDD 200 (424)
Q Consensus 126 ~~v~~i~~~p~~~~~latg~~-dg----~v~iwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~d 200 (424)
..+..++|+|+|+. ||.+.. .| .|++||+.+ + ... ....+...+..++|+|+ . .|+.++.+
T Consensus 163 ~~~~~~~~SPDG~~-la~~~~~~G~e~~~i~v~dl~t--------g--~~~-~~~~~~~~~~~~~wspD-~-~l~~~~~~ 228 (741)
T 1yr2_A 163 TALDAWAASDDGRL-LAYSVQDGGSDWRTVKFVGVAD--------G--KPL-ADELKWVKFSGLAWLGN-D-ALLYSRFA 228 (741)
T ss_dssp EEEEEEEECTTSSE-EEEEEEETTCSEEEEEEEETTT--------C--CEE-EEEEEEEESCCCEESTT-S-EEEEEECC
T ss_pred EEEEeEEECCCCCE-EEEEEcCCCCceEEEEEEECCC--------C--CCC-CccCCCceeccEEEECC-C-EEEEEEec
Confidence 46788999999984 554443 33 699999987 2 211 11112222468999998 6 56666655
Q ss_pred Cc--------------EEEEeCCCCCCCCcccceeeeecCCcceeeEEeeCCCCcEEEEEeC----CCeEEEEECCCCCC
Q 014472 201 AQ--------------ICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGD----DQYLLIWDLRTPSV 262 (424)
Q Consensus 201 g~--------------i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~~s~~~----dg~i~i~d~~~~~~ 262 (424)
+. |.+|++.++.... ..+.....+...+..+.|+|+|+.+++++.. ...|++||+.++..
T Consensus 229 ~~~~~~~~~~~~~~~~v~~~~lgt~~~~~--~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~ 306 (741)
T 1yr2_A 229 EPKEGQAFQALNYNQTVWLHRLGTPQSAD--QPVFATPELPKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKI 306 (741)
T ss_dssp CC--------CCCCCEEEEEETTSCGGGC--EEEECCTTCTTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEE
T ss_pred CcccccccccCCCCCEEEEEECCCCchhC--EEEeccCCCCeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCC
Confidence 43 8899987653211 1111112233458899999999877655542 34899999987521
Q ss_pred CCCeeEecccCCCeeEEEecCCCCeEEEEEeC---CCcEEEEECCCC-CCcceeecCCCCCEEEEEEcCCCCcEEEEEeC
Q 014472 263 SKPVQSVVAHQSEVNCLAFNPFNEWILATGST---DKTVKLFDLRKI-STALHTFDSHKEEVFQVGWNPKNETILASCCL 338 (424)
Q Consensus 263 ~~~~~~~~~~~~~v~~i~~~~~~~~~l~~g~~---dg~i~iwd~~~~-~~~~~~~~~~~~~v~~~~~sp~~~~~l~s~~~ 338 (424)
.....+..+...+.... .|+++.+++.... ++.|.+||+... ......+..+...+..+.|+ +..++++...
T Consensus 307 -~~~~~l~~~~~~~~~~~-~~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~l~~~~~~--~~~lv~~~~~ 382 (741)
T 1yr2_A 307 -GPVTALIPDLKAQWDFV-DGVGDQLWFVSGDGAPLKKIVRVDLSGSTPRFDTVVPESKDNLESVGIA--GNRLFASYIH 382 (741)
T ss_dssp -CCCEEEECSSSSCEEEE-EEETTEEEEEECTTCTTCEEEEEECSSSSCEEEEEECCCSSEEEEEEEE--BTEEEEEEEE
T ss_pred -cccEEecCCCCceEEEE-eccCCEEEEEECCCCCCCEEEEEeCCCCccccEEEecCCCCeEEEEEEE--CCEEEEEEEE
Confidence 11334444444555553 4788864444432 346999998763 12333344445556678887 3458889999
Q ss_pred CCeEEEeeCCCCCcccCCCccCCCCCeeeEEEcC-CCCCcceEEeCCCCCcEEEEEe---CCCcEEEEecCCCC
Q 014472 339 GRRLMVWDLSRIDEEQTPEDAEDGPPELLFIHGG-HTSKISDFSWNPCEDWVISSVA---EDNILQIWQMAENI 408 (424)
Q Consensus 339 dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~-h~~~v~~~~~~~~~~~~l~s~~---~d~~i~iw~~~~~~ 408 (424)
|+..+||.+.... .....+.. +...+..++++|+++.++++.+ ..+.|++||+.++.
T Consensus 383 dg~~~l~~~~~~g-------------~~~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~ 443 (741)
T 1yr2_A 383 DAKSQVLAFDLDG-------------KPAGAVSLPGIGSASGLSGRPGDRHAYLSFSSFTQPATVLALDPATAK 443 (741)
T ss_dssp TTEEEEEEEETTS-------------CEEEECBCSSSCEEEEEECCBTCSCEEEEEEETTEEEEEEEEETTTTE
T ss_pred CCEEEEEEEeCCC-------------CceeeccCCCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCCc
Confidence 9988887654211 12222332 3556888999999886555544 34789999998764
No 195
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.48 E-value=3.7e-11 Score=120.54 Aligned_cols=205 Identities=12% Similarity=0.021 Sum_probs=136.8
Q ss_pred eeEEEecCCCCcEEEEEecCCe----------------EEEEeCCCCCCCCCCCCCCCCcEEEec--CCCCeeeEEecCC
Q 014472 128 VNRARYMPQNPFLIATKTVSAE----------------VYVFDYSKHPSKPPLDGACSPDLRLRG--HSTEGYGLSWSKF 189 (424)
Q Consensus 128 v~~i~~~p~~~~~latg~~dg~----------------v~iwd~~~~~~~~~~~~~~~~~~~~~~--h~~~v~~l~~~~~ 189 (424)
+..++|+|+++ .|+.++.++. |++|++.+ +.......+.. |...+.++.|+|+
T Consensus 173 ~~~~~wspDg~-~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t--------~~~~~~~v~~~~~~~~~~~~~~~SpD 243 (710)
T 2xdw_A 173 FSCMAWTHDGK-GMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGT--------DQSEDILCAEFPDEPKWMGGAELSDD 243 (710)
T ss_dssp SCCEEECTTSS-EEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTS--------CGGGCEEEECCTTCTTCEEEEEECTT
T ss_pred cceEEEEeCCC-EEEEEEECCccccccccccccCCCCEEEEEECCC--------CcccceEEeccCCCCeEEEEEEEcCC
Confidence 67899999998 4555555554 99999976 21111222232 4555789999999
Q ss_pred CCceEEEEeC-----CCcEEEEeCCC------CCCCCcccceeeeecCCcceeeEEeeCCCCcEEEEEeCC---CeEEEE
Q 014472 190 KEGHLLSGSD-----DAQICLWDINA------APKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDD---QYLLIW 255 (424)
Q Consensus 190 ~~~~l~s~~~-----dg~i~vwd~~~------~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~~s~~~d---g~i~i~ 255 (424)
+. +|+.++. +..|.+||+.+ +.. ....+..+...+.. .|++++..+++.+..+ +.|.+|
T Consensus 244 g~-~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~-----~~~~l~~~~~~~~~-~~s~dg~~l~~~s~~~~~~~~l~~~ 316 (710)
T 2xdw_A 244 GR-YVLLSIREGCDPVNRLWYCDLQQESNGITGIL-----KWVKLIDNFEGEYD-YVTNEGTVFTFKTNRHSPNYRLINI 316 (710)
T ss_dssp SC-EEEEEEECSSSSCCEEEEEEGGGSSSSSCSSC-----CCEEEECSSSSCEE-EEEEETTEEEEEECTTCTTCEEEEE
T ss_pred CC-EEEEEEEccCCCccEEEEEECcccccccCCcc-----ceEEeeCCCCcEEE-EEeccCCEEEEEECCCCCCCEEEEE
Confidence 98 4555443 56899999975 311 12333445555544 4788888776565443 479999
Q ss_pred ECCCCCCCCCeeEecccCC--CeeEEEecCCCCeEEEEEeCCCc--EEEEECCCCCCcceeecCCCCCEEEEEEcCCCCc
Q 014472 256 DLRTPSVSKPVQSVVAHQS--EVNCLAFNPFNEWILATGSTDKT--VKLFDLRKISTALHTFDSHKEEVFQVGWNPKNET 331 (424)
Q Consensus 256 d~~~~~~~~~~~~~~~~~~--~v~~i~~~~~~~~~l~~g~~dg~--i~iwd~~~~~~~~~~~~~~~~~v~~~~~sp~~~~ 331 (424)
|+.++.. .....+..|.. .+..++|++.+ .++++...++. |.+||+.+ +..+..+..+.+.+..+.++|++..
T Consensus 317 d~~~~~~-~~~~~l~~~~~~~~~~~~~~~~~~-~lv~~~~~~g~~~l~~~~~~~-g~~~~~l~~~~~~v~~~~~s~d~~~ 393 (710)
T 2xdw_A 317 DFTDPEE-SKWKVLVPEHEKDVLEWVACVRSN-FLVLCYLHDVKNTLQLHDLAT-GALLKIFPLEVGSVVGYSGQKKDTE 393 (710)
T ss_dssp ETTSCCG-GGCEEEECCCSSCEEEEEEEETTT-EEEEEEEETTEEEEEEEETTT-CCEEEEECCCSSEEEEEECCTTCSE
T ss_pred eCCCCCc-ccceeccCCCCCCeEEEEEEEcCC-EEEEEEEECCEEEEEEEECCC-CCEEEecCCCCceEEEEecCCCCCE
Confidence 9987541 11234444443 68889998644 57888888885 56667755 5566777777788999999998876
Q ss_pred EEEEEeC---CCeEEEeeCCCCC
Q 014472 332 ILASCCL---GRRLMVWDLSRID 351 (424)
Q Consensus 332 ~l~s~~~---dg~i~iwd~~~~~ 351 (424)
++++.+. .+.|.+||+.++.
T Consensus 394 l~~~~ss~~~P~~i~~~d~~tg~ 416 (710)
T 2xdw_A 394 IFYQFTSFLSPGIIYHCDLTKEE 416 (710)
T ss_dssp EEEEEECSSCCCEEEEEETTSSS
T ss_pred EEEEEeCCCCCCEEEEEECCCCc
Confidence 6655443 4789999997754
No 196
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.48 E-value=2.3e-11 Score=107.01 Aligned_cols=210 Identities=8% Similarity=-0.010 Sum_probs=146.6
Q ss_pred cEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCC-CCeeeEEecCCCCceEEEEeCCCcEEEEeCCCCCCCCcc
Q 014472 139 FLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHS-TEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSL 217 (424)
Q Consensus 139 ~~latg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~h~-~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~ 217 (424)
.+|++++.++.|.+||..+ .+...++..+. ..+.++.+.|++. +|+ +.++.|..||. +++.
T Consensus 6 ~~lv~~~~~~~v~~~d~~t----------G~~~w~~~~~~~~~~~~~~~~pdG~-ilv--s~~~~V~~~d~-~G~~---- 67 (276)
T 3no2_A 6 HLLVGGSGWNKIAIINKDT----------KEIVWEYPLEKGWECNSVAATKAGE-ILF--SYSKGAKMITR-DGRE---- 67 (276)
T ss_dssp EEEEECTTCSEEEEEETTT----------TEEEEEEECCTTCCCCEEEECTTSC-EEE--ECBSEEEEECT-TSCE----
T ss_pred cEEEeeCCCCEEEEEECCC----------CeEEEEeCCCccCCCcCeEECCCCC-EEE--eCCCCEEEECC-CCCE----
Confidence 4899999999999999866 45566676665 4788999999887 566 45778999998 5532
Q ss_pred cceeeeecC-CcceeeEEeeCCCCcEEEEEeC-CCeEEEEECCCCCCCCCeeEec------ccCCCeeEEEecCCCCeEE
Q 014472 218 EAMQIFKVH-EGVVEDVAWHLRHEYLFGSVGD-DQYLLIWDLRTPSVSKPVQSVV------AHQSEVNCLAFNPFNEWIL 289 (424)
Q Consensus 218 ~~~~~~~~~-~~~v~~i~~~~~~~~~~~s~~~-dg~i~i~d~~~~~~~~~~~~~~------~~~~~v~~i~~~~~~~~~l 289 (424)
+..+..+ ...+.++.+.+++..++ +.+. ++.|..+|. .++. +..+. .+......+++.+++. ++
T Consensus 68 --~W~~~~~~~~~~~~~~~~~dG~~lv-~~~~~~~~v~~vd~-~Gk~---l~~~~~~~~~~~~~~~~~~v~~~~~G~-~l 139 (276)
T 3no2_A 68 --LWNIAAPAGCEMQTARILPDGNALV-AWCGHPSTILEVNM-KGEV---LSKTEFETGIERPHAQFRQINKNKKGN-YL 139 (276)
T ss_dssp --EEEEECCTTCEEEEEEECTTSCEEE-EEESTTEEEEEECT-TSCE---EEEEEECCSCSSGGGSCSCCEECTTSC-EE
T ss_pred --EEEEcCCCCccccccEECCCCCEEE-EecCCCCEEEEEeC-CCCE---EEEEeccCCCCcccccccCceECCCCC-EE
Confidence 3333333 34688899999997554 5555 778888876 3332 22221 1122455667888887 68
Q ss_pred EEEeCCCcEEEEECCCCCCcceeecCCCCCEEEEEEcCCCCcEEEEEeCCCeEEEeeCCCCCcccCCCccCCCCCeeeEE
Q 014472 290 ATGSTDKTVKLFDLRKISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPEDAEDGPPELLFI 369 (424)
Q Consensus 290 ~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~ 369 (424)
++...++.|..||.. ++.+.++..+ ..+.++...+++. ++++++.++.|..+|..++. .+..
T Consensus 140 v~~~~~~~v~~~d~~--G~~~w~~~~~-~~~~~~~~~~~g~-~~v~~~~~~~v~~~d~~tG~--------------~~w~ 201 (276)
T 3no2_A 140 VPLFATSEVREIAPN--GQLLNSVKLS-GTPFSSAFLDNGD-CLVACGDAHCFVQLNLESNR--------------IVRR 201 (276)
T ss_dssp EEETTTTEEEEECTT--SCEEEEEECS-SCCCEEEECTTSC-EEEECBTTSEEEEECTTTCC--------------EEEE
T ss_pred EEecCCCEEEEECCC--CCEEEEEECC-CCccceeEcCCCC-EEEEeCCCCeEEEEeCcCCc--------------EEEE
Confidence 888889999999986 5677777653 4566788889885 77788888899999988763 3333
Q ss_pred EcCC------CCCcceEEeCCCCCcEEEEE
Q 014472 370 HGGH------TSKISDFSWNPCEDWVISSV 393 (424)
Q Consensus 370 ~~~h------~~~v~~~~~~~~~~~~l~s~ 393 (424)
+..+ ...+..+...++|. ++++.
T Consensus 202 ~~~~~~~~~~l~~~~~~~~~~~G~-i~v~~ 230 (276)
T 3no2_A 202 VNANDIEGVQLFFVAQLFPLQNGG-LYICN 230 (276)
T ss_dssp EEGGGSBSCCCSEEEEEEECTTSC-EEEEE
T ss_pred ecCCCCCCccccccccceEcCCCC-EEEEe
Confidence 3221 12366777888888 55555
No 197
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.47 E-value=1e-11 Score=110.54 Aligned_cols=211 Identities=10% Similarity=-0.010 Sum_probs=142.9
Q ss_pred cEEEecCCCCeeeEEecCCCCceEEEEeCCCcEEEEeCCCCCCCCcccceeeeecCCcceeeEEeeCCCCcEEEEEeCCC
Q 014472 171 DLRLRGHSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQ 250 (424)
Q Consensus 171 ~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~~s~~~dg 250 (424)
...+..+.....+++|+|++..+++++..++.|..|+..++ ...+..+...+.++++++++. ++++...++
T Consensus 20 ~~~l~~~~~~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~--------~~~~~~~~~~~~~l~~~~dg~-l~v~~~~~~ 90 (296)
T 3e5z_A 20 ARRLADGFTWTEGPVYVPARSAVIFSDVRQNRTWAWSDDGQ--------LSPEMHPSHHQNGHCLNKQGH-LIACSHGLR 90 (296)
T ss_dssp CEEEECCCSSEEEEEEEGGGTEEEEEEGGGTEEEEEETTSC--------EEEEESSCSSEEEEEECTTCC-EEEEETTTT
T ss_pred EEEEecCCccccCCeEeCCCCEEEEEeCCCCEEEEEECCCC--------eEEEECCCCCcceeeECCCCc-EEEEecCCC
Confidence 44555666778899999988767888888999999998754 223344667789999999986 666666678
Q ss_pred eEEEEECCCCCCCCCeeEecc-cCCCeeEEEecCCCCeEEEE----Ee-------------CCCcEEEEECCCCCCccee
Q 014472 251 YLLIWDLRTPSVSKPVQSVVA-HQSEVNCLAFNPFNEWILAT----GS-------------TDKTVKLFDLRKISTALHT 312 (424)
Q Consensus 251 ~i~i~d~~~~~~~~~~~~~~~-~~~~v~~i~~~~~~~~~l~~----g~-------------~dg~i~iwd~~~~~~~~~~ 312 (424)
.|.+||..+++.......... ....++.++++|+|. ++++ |+ ..+.|..+|.. ..+..
T Consensus 91 ~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~-l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~---g~~~~ 166 (296)
T 3e5z_A 91 RLERQREPGGEWESIADSFEGKKLNSPNDVCLAPDGS-LWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD---GTLSA 166 (296)
T ss_dssp EEEEECSTTCCEEEEECEETTEECCCCCCEEECTTSC-EEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT---SCEEE
T ss_pred eEEEEcCCCCcEEEEeeccCCCCCCCCCCEEECCCCC-EEEECCccccccccccccccccCCCcEEEEECCC---CCEEE
Confidence 999999977653100001111 123567899999997 5666 32 12345555443 23444
Q ss_pred ecCCCCCEEEEEEcCCCCcEEEEEeCCCeEEEeeCCCCCcccCCCccCCCCCeeeEEEcCCCCCcceEEeCCCCCcEEEE
Q 014472 313 FDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPEDAEDGPPELLFIHGGHTSKISDFSWNPCEDWVISS 392 (424)
Q Consensus 313 ~~~~~~~v~~~~~sp~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s 392 (424)
+..+......++|+|+++. |++.+.++.|.+|++....... .....+..+...+.+++++++|. ++++
T Consensus 167 ~~~~~~~~~gi~~s~dg~~-lv~~~~~~~i~~~~~~~~g~~~----------~~~~~~~~~~~~p~~i~~d~~G~-l~v~ 234 (296)
T 3e5z_A 167 PIRDRVKPNGLAFLPSGNL-LVSDTGDNATHRYCLNARGETE----------YQGVHFTVEPGKTDGLRVDAGGL-IWAS 234 (296)
T ss_dssp EECCCSSEEEEEECTTSCE-EEEETTTTEEEEEEECSSSCEE----------EEEEEECCSSSCCCSEEEBTTSC-EEEE
T ss_pred eecCCCCCccEEECCCCCE-EEEeCCCCeEEEEEECCCCcCc----------CCCeEeeCCCCCCCeEEECCCCC-EEEE
Confidence 5556677899999999975 5778888999999987311100 00111133455678999999998 6666
Q ss_pred EeCCCcEEEEecCCCC
Q 014472 393 VAEDNILQIWQMAENI 408 (424)
Q Consensus 393 ~~~d~~i~iw~~~~~~ 408 (424)
. ++.|.+|+.....
T Consensus 235 ~--~~~v~~~~~~g~~ 248 (296)
T 3e5z_A 235 A--GDGVHVLTPDGDE 248 (296)
T ss_dssp E--TTEEEEECTTSCE
T ss_pred c--CCeEEEECCCCCE
Confidence 5 7889999987543
No 198
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.46 E-value=1.5e-10 Score=104.60 Aligned_cols=228 Identities=11% Similarity=0.024 Sum_probs=148.9
Q ss_pred ceeEEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCCeeeEEecCCCCceEEEEeCCCcEEEE
Q 014472 127 EVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDDAQICLW 206 (424)
Q Consensus 127 ~v~~i~~~p~~~~~latg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vw 206 (424)
-....+|+|++..+++++..++.|.+|+... + . ...+. ....+.+++|.+++. +++ ++.+ .|.+|
T Consensus 50 ~~egp~~~~~~~~l~~~d~~~~~i~~~d~~~--------~--~-~~~~~-~~~~v~~i~~~~dg~-l~v-~~~~-gl~~~ 114 (326)
T 2ghs_A 50 LGEGPTFDPASGTAWWFNILERELHELHLAS--------G--R-KTVHA-LPFMGSALAKISDSK-QLI-ASDD-GLFLR 114 (326)
T ss_dssp BEEEEEEETTTTEEEEEEGGGTEEEEEETTT--------T--E-EEEEE-CSSCEEEEEEEETTE-EEE-EETT-EEEEE
T ss_pred CCcCCeEeCCCCEEEEEECCCCEEEEEECCC--------C--c-EEEEE-CCCcceEEEEeCCCe-EEE-EECC-CEEEE
Confidence 3467899998777888888889999999876 1 1 12222 356799999999876 444 4444 49999
Q ss_pred eCCCCCCCCcccceeeee--cCCcceeeEEeeCCCCcEEEEEeC------CCeEEEEECCCCCCCCCeeEecccCCCeeE
Q 014472 207 DINAAPKNKSLEAMQIFK--VHEGVVEDVAWHLRHEYLFGSVGD------DQYLLIWDLRTPSVSKPVQSVVAHQSEVNC 278 (424)
Q Consensus 207 d~~~~~~~~~~~~~~~~~--~~~~~v~~i~~~~~~~~~~~s~~~------dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~ 278 (424)
|..++.. ..+.... .....+++++++|++. ++++... .+.|..++ .++ +..+.......+.
T Consensus 115 d~~~g~~----~~~~~~~~~~~~~~~~~i~~d~~G~-l~v~~~~~~~~~~~~~l~~~~--~g~----~~~~~~~~~~~~~ 183 (326)
T 2ghs_A 115 DTATGVL----TLHAELESDLPGNRSNDGRMHPSGA-LWIGTMGRKAETGAGSIYHVA--KGK----VTKLFADISIPNS 183 (326)
T ss_dssp ETTTCCE----EEEECSSTTCTTEEEEEEEECTTSC-EEEEEEETTCCTTCEEEEEEE--TTE----EEEEEEEESSEEE
T ss_pred ECCCCcE----EEEeeCCCCCCCCCCCCEEECCCCC-EEEEeCCCcCCCCceEEEEEe--CCc----EEEeeCCCcccCC
Confidence 9876532 1111111 1124689999999987 4444332 24566666 322 2223233346789
Q ss_pred EEecCCCCeEEEEEeCCCcEEEEECC--CCC-C-----cceeecCCCCCEEEEEEcCCCCcEEEEEeCCCeEEEeeCCCC
Q 014472 279 LAFNPFNEWILATGSTDKTVKLFDLR--KIS-T-----ALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRI 350 (424)
Q Consensus 279 i~~~~~~~~~l~~g~~dg~i~iwd~~--~~~-~-----~~~~~~~~~~~v~~~~~sp~~~~~l~s~~~dg~i~iwd~~~~ 350 (424)
++|+|+++.++++.+.++.|.+||+. + + . .+..+.........+++++++. ++++...++.|.+|+...
T Consensus 184 i~~s~dg~~lyv~~~~~~~I~~~d~~~~~-Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~-lwva~~~~~~v~~~d~~g- 260 (326)
T 2ghs_A 184 ICFSPDGTTGYFVDTKVNRLMRVPLDART-GLPTGKAEVFIDSTGIKGGMDGSVCDAEGH-IWNARWGEGAVDRYDTDG- 260 (326)
T ss_dssp EEECTTSCEEEEEETTTCEEEEEEBCTTT-CCBSSCCEEEEECTTSSSEEEEEEECTTSC-EEEEEETTTEEEEECTTC-
T ss_pred eEEcCCCCEEEEEECCCCEEEEEEccccc-CCcccCceEEEECCCCCCCCCeeEECCCCC-EEEEEeCCCEEEEECCCC-
Confidence 99999998666666677899999986 3 3 2 1222333345678899999995 666666678899998742
Q ss_pred CcccCCCccCCCCCeeeEEEcCCCCCcceEEeC-CCCCcEEEEEeCCC
Q 014472 351 DEEQTPEDAEDGPPELLFIHGGHTSKISDFSWN-PCEDWVISSVAEDN 397 (424)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~-~~~~~~l~s~~~d~ 397 (424)
+.+..+..+...+++++|+ +++..++++...++
T Consensus 261 --------------~~~~~i~~~~~~~~~~af~g~d~~~L~vt~~~~~ 294 (326)
T 2ghs_A 261 --------------NHIARYEVPGKQTTCPAFIGPDASRLLVTSAREH 294 (326)
T ss_dssp --------------CEEEEEECSCSBEEEEEEESTTSCEEEEEEBCTT
T ss_pred --------------CEEEEEECCCCCcEEEEEecCCCCEEEEEecCCC
Confidence 3334444455568999998 88876666666553
No 199
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=99.46 E-value=2.1e-11 Score=121.82 Aligned_cols=250 Identities=12% Similarity=0.114 Sum_probs=157.1
Q ss_pred cCCceeEEEecCCCCcEEEEEe----cCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCCeeeEEecCCCCceEEEEeC
Q 014472 124 HDGEVNRARYMPQNPFLIATKT----VSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSD 199 (424)
Q Consensus 124 h~~~v~~i~~~p~~~~~latg~----~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~ 199 (424)
|...+..++|+|+++.++.+.+ ....|++||+.+ + ... ....+.....+++|+ +++. |+.++.
T Consensus 127 ~~~~l~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~t--------g--~~~-~~~~~~~k~~~~~Ws-Dg~~-l~y~~~ 193 (693)
T 3iuj_A 127 GTTALDQLSFSRDGRILAYSLSLAGSDWREIHLMDVES--------K--QPL-ETPLKDVKFSGISWL-GNEG-FFYSSY 193 (693)
T ss_dssp SCCEEEEEEECTTSSEEEEEEECSSCCEEEEEEEETTT--------C--SEE-EEEEEEEESCCCEEE-TTTE-EEEEES
T ss_pred CcEEEEEEEECCCCCEEEEEEecCCCceEEEEEEECCC--------C--CCC-ccccCCceeccEEEe-CCCE-EEEEEe
Confidence 3446778899999984443332 235799999987 2 211 111111123578999 8884 666666
Q ss_pred CC-------------cEEEEeCCCCCCCCcccceeeeec-CCcceeeEEeeCCCCcEEEEEeCC---CeEEEEECCCCCC
Q 014472 200 DA-------------QICLWDINAAPKNKSLEAMQIFKV-HEGVVEDVAWHLRHEYLFGSVGDD---QYLLIWDLRTPSV 262 (424)
Q Consensus 200 dg-------------~i~vwd~~~~~~~~~~~~~~~~~~-~~~~v~~i~~~~~~~~~~~s~~~d---g~i~i~d~~~~~~ 262 (424)
+. .|++|++.+..... ..+..... |...+..+.|+|+++.++++.+.+ ..|+++|+.++..
T Consensus 194 ~~~~~~~~~~~~~~~~v~~~~lgt~~~~~--~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~ 271 (693)
T 3iuj_A 194 DKPDGSELSARTDQHKVYFHRLGTAQEDD--RLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENA 271 (693)
T ss_dssp SCCC-------CCCCEEEEEETTSCGGGC--EEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTC
T ss_pred cCcccccccccCCCcEEEEEECCCCcccc--eEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCC
Confidence 53 39999987653211 11222222 344577899999999887766533 5899999987642
Q ss_pred CCCeeEecccCCCeeEEEecCCCCeEEEEEeCC---CcEEEEECCCCCC-cceeecCCCCCEEEEEEcCCCCcEEEEEeC
Q 014472 263 SKPVQSVVAHQSEVNCLAFNPFNEWILATGSTD---KTVKLFDLRKIST-ALHTFDSHKEEVFQVGWNPKNETILASCCL 338 (424)
Q Consensus 263 ~~~~~~~~~~~~~v~~i~~~~~~~~~l~~g~~d---g~i~iwd~~~~~~-~~~~~~~~~~~v~~~~~sp~~~~~l~s~~~ 338 (424)
....+..+....... |++++..+++.+..+ +.|..+|+.+... ....+..|...+. .|++++..++++...
T Consensus 272 --~~~~l~~~~~~~~~~-~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~--~~s~~g~~lv~~~~~ 346 (693)
T 3iuj_A 272 --PLLTVQGDLDADVSL-VDNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLIPERQQVL--TVHSGSGYLFAEYMV 346 (693)
T ss_dssp --CCEEEECSSSSCEEE-EEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCE--EEEEETTEEEEEEEE
T ss_pred --ceEEEeCCCCceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCCccccEEEecCCCCEE--EEEEECCEEEEEEEE
Confidence 234455555555554 666677777776654 5799999987322 1345666666665 899998866666666
Q ss_pred CC--eEEEeeCCCCCcccCCCccCCCCCeeeEEEc-CCCCCcceEEeCCCCCcEEEEEeC---CCcEEEEecCCCC
Q 014472 339 GR--RLMVWDLSRIDEEQTPEDAEDGPPELLFIHG-GHTSKISDFSWNPCEDWVISSVAE---DNILQIWQMAENI 408 (424)
Q Consensus 339 dg--~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~-~h~~~v~~~~~~~~~~~~l~s~~~---d~~i~iw~~~~~~ 408 (424)
++ .|.+|++.... ...+. .....+..+.++++++.++++.+. -+.|..|++.++.
T Consensus 347 ~g~~~l~~~d~~g~~---------------~~~l~~p~~~~~~~~~~~~d~~~l~~~~ss~~tP~~l~~~d~~~g~ 407 (693)
T 3iuj_A 347 DATARVEQFDYEGKR---------------VREVALPGLGSVSGFNGKHDDPALYFGFENYAQPPTLYRFEPKSGA 407 (693)
T ss_dssp TTEEEEEEECTTSCE---------------EEEECCSSSSEEEECCCCTTCSCEEEEEECSSSCCEEEEECTTTCC
T ss_pred CCeeEEEEEECCCCe---------------eEEeecCCCceEEeeecCCCCCEEEEEecCCCCCCEEEEEECCCCe
Confidence 66 57888876421 11121 233456677888888866655443 2789999987764
No 200
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.45 E-value=5.4e-10 Score=99.20 Aligned_cols=241 Identities=5% Similarity=-0.045 Sum_probs=161.5
Q ss_pred cCCceeEEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCCeeeEEecCCCCceEEEEeCCCcE
Q 014472 124 HDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDDAQI 203 (424)
Q Consensus 124 h~~~v~~i~~~p~~~~~latg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i 203 (424)
....+.++++.+++. +.++...++.|.+|+... ......+..+...+.++++.+++. ++++...++.|
T Consensus 18 ~~~~p~~i~~d~~g~-l~v~~~~~~~v~~~~~~~----------~~~~~~~~~~~~~~~~i~~~~~g~-l~v~~~~~~~v 85 (300)
T 2qc5_A 18 PDSGPYGITSSEDGK-VWFTQHKANKISSLDQSG----------RIKEFEVPTPDAKVMCLIVSSLGD-IWFTENGANKI 85 (300)
T ss_dssp TTCCEEEEEECTTSC-EEEEETTTTEEEEECTTS----------CEEEEECSSTTCCEEEEEECTTSC-EEEEETTTTEE
T ss_pred CCCCcceeeECCCCC-EEEEcCCCCeEEEECCCC----------ceEEEECCCCCCcceeEEECCCCC-EEEEecCCCeE
Confidence 346788999999886 666656678999998662 011112223346788999998776 56665567889
Q ss_pred EEEeCCCCCCCCcccceeeeecCCcceeeEEeeCCCCcEEEEEeCCCeEEEEECCCCCCCCCeeEecccCCCeeEEEecC
Q 014472 204 CLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNP 283 (424)
Q Consensus 204 ~vwd~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~~ 283 (424)
..+|.. +.. .. .........+.++++.+++. ++++...++.|..+|.. +.. ....+......+..+++++
T Consensus 86 ~~~d~~-g~~----~~-~~~~~~~~~~~~i~~~~~g~-l~v~~~~~~~i~~~~~~-g~~--~~~~~~~~~~~~~~i~~d~ 155 (300)
T 2qc5_A 86 GKLSKK-GGF----TE-YPLPQPDSGPYGITEGLNGD-IWFTQLNGDRIGKLTAD-GTI--YEYDLPNKGSYPAFITLGS 155 (300)
T ss_dssp EEECTT-SCE----EE-EECSSTTCCEEEEEECSTTC-EEEEETTTTEEEEECTT-SCE--EEEECSSTTCCEEEEEECT
T ss_pred EEECCC-CCe----EE-ecCCCCCCCCccceECCCCC-EEEEccCCCeEEEECCC-CCE--EEccCCCCCCCceeEEECC
Confidence 999986 321 11 11122345788999998875 66566668899999986 432 1111222346789999999
Q ss_pred CCCeEEEEEeCCCcEEEEECCCCCCcce-eecCCCCCEEEEEEcCCCCcEEEEEeCCCeEEEeeCCCCCcccCCCccCCC
Q 014472 284 FNEWILATGSTDKTVKLFDLRKISTALH-TFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPEDAEDG 362 (424)
Q Consensus 284 ~~~~~l~~g~~dg~i~iwd~~~~~~~~~-~~~~~~~~v~~~~~sp~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~ 362 (424)
++. ++++...++.|..||.. +.... ....+...+..+++++++. ++++....+.|.+|+.. +.
T Consensus 156 ~g~-l~v~~~~~~~i~~~~~~--g~~~~~~~~~~~~~~~~i~~d~~g~-l~v~~~~~~~i~~~~~~-g~----------- 219 (300)
T 2qc5_A 156 DNA-LWFTENQNNSIGRITNT--GKLEEYPLPTNAAAPVGITSGNDGA-LWFVEIMGNKIGRITTT-GE----------- 219 (300)
T ss_dssp TSS-EEEEETTTTEEEEECTT--CCEEEEECSSTTCCEEEEEECTTSS-EEEEETTTTEEEEECTT-CC-----------
T ss_pred CCC-EEEEecCCCeEEEECCC--CcEEEeeCCCCCCCcceEEECCCCC-EEEEccCCCEEEEEcCC-Cc-----------
Confidence 887 66666667889999983 33222 2223445789999999884 66666667789999983 21
Q ss_pred CCeeeEEEcCCCCCcceEEeCCCCCcEEEEEeCCCcEEEEecC
Q 014472 363 PPELLFIHGGHTSKISDFSWNPCEDWVISSVAEDNILQIWQMA 405 (424)
Q Consensus 363 ~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iw~~~ 405 (424)
........+...+.++++++++. ++++...++.|..|+..
T Consensus 220 --~~~~~~~~~~~~~~~i~~d~~g~-l~v~~~~~~~i~~~~~~ 259 (300)
T 2qc5_A 220 --ISEYDIPTPNARPHAITAGKNSE-IWFTEWGANQIGRITND 259 (300)
T ss_dssp --EEEEECSSTTCCEEEEEECSTTC-EEEEETTTTEEEEECTT
T ss_pred --EEEEECCCCCCCceEEEECCCCC-EEEeccCCCeEEEECCC
Confidence 11122223445688999999998 77776667899999984
No 201
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.42 E-value=6.1e-12 Score=114.77 Aligned_cols=178 Identities=15% Similarity=0.054 Sum_probs=125.5
Q ss_pred CeeeEEecCCCCceEEEEeCCCcEEEEeCCCCC-----CCCcccceeeeecCCcceeeEEeeCCCCcEEEEEeCCCeEEE
Q 014472 180 EGYGLSWSKFKEGHLLSGSDDAQICLWDINAAP-----KNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLI 254 (424)
Q Consensus 180 ~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~-----~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~~s~~~dg~i~i 254 (424)
.+..|++++... ++++|+.+ .+.+|++.... ....+..... ..+.. |+.++| ++. .++++ .++.|++
T Consensus 39 ~~nlLais~~~g-ll~a~~~~-~l~v~~~~~l~~~~~~~~~~~~~~~~-~~lp~-V~~l~f--d~~-~L~v~-~~~~l~v 110 (388)
T 1xip_A 39 SLQNLDISNSKS-LFVAASGS-KAVVGELQLLRDHITSDSTPLTFKWE-KEIPD-VIFVCF--HGD-QVLVS-TRNALYS 110 (388)
T ss_dssp CCBCEEEETTTT-EEEEEETT-EEEEEEHHHHHHHHHSSSCCCCCSEE-EECTT-EEEEEE--ETT-EEEEE-ESSEEEE
T ss_pred cccEEEEcCCCC-EEEEeCCC-EEEEEEhhHhhhhhccccccccceEE-eeCCC-eeEEEE--CCC-EEEEE-cCCcEEE
Confidence 588999999776 78888887 45569875332 0001222122 23566 999999 665 44455 8899999
Q ss_pred EECCCCCCCCCeeEecccCCCeeEEEecCCCCeEEEEEeCCCcEEEEECCCCCCcceeecCCCCCEEEEEEcCCCCcEEE
Q 014472 255 WDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATGSTDKTVKLFDLRKISTALHTFDSHKEEVFQVGWNPKNETILA 334 (424)
Q Consensus 255 ~d~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~ 334 (424)
||+++... ......|..++.++.+.+. . +|+++.||.|.+||+.. +.... +...|++++|||.| ++
T Consensus 111 ~dv~sl~~---~~~~~~~~~~v~~i~~~~p--~-~av~~~dG~L~v~dl~~-~~~~~----~~~~Vs~v~WSpkG---~~ 176 (388)
T 1xip_A 111 LDLEELSE---FRTVTSFEKPVFQLKNVNN--T-LVILNSVNDLSALDLRT-KSTKQ----LAQNVTSFDVTNSQ---LA 176 (388)
T ss_dssp EESSSTTC---EEEEEECSSCEEEEEECSS--E-EEEEETTSEEEEEETTT-CCEEE----EEESEEEEEECSSE---EE
T ss_pred EEchhhhc---cCccceeecceeeEEecCC--C-EEEEECCCCEEEEEccC-Ccccc----ccCCceEEEEcCCc---eE
Confidence 99988553 4445567788888877653 3 78889999999999986 33322 45689999999998 56
Q ss_pred EEeCCCeEEEeeCCCCCcccCCCccCCCCCeeeEEE------c---CCCCCcceEEeCCCCCcEEEE
Q 014472 335 SCCLGRRLMVWDLSRIDEEQTPEDAEDGPPELLFIH------G---GHTSKISDFSWNPCEDWVISS 392 (424)
Q Consensus 335 s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~------~---~h~~~v~~~~~~~~~~~~l~s 392 (424)
.|..||.+++|+....... ....+ . +|...|.++.|.+++.+ +++
T Consensus 177 vg~~dg~i~~~~~~~~~~~------------~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~~f-lv~ 230 (388)
T 1xip_A 177 VLLKDRSFQSFAWRNGEME------------KQFEFSLPSELEELPVEEYSPLSVTILSPQDF-LAV 230 (388)
T ss_dssp EEETTSCEEEEEEETTEEE------------EEEEECCCHHHHTSCTTTSEEEEEEESSSSEE-EEE
T ss_pred EEEcCCcEEEEcCCCcccc------------ccceecCCcccccccCCCeeEEEEEEecCCeE-EEE
Confidence 7889999999988664310 01222 2 46788999999999884 444
No 202
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.40 E-value=1.1e-10 Score=102.27 Aligned_cols=199 Identities=8% Similarity=-0.034 Sum_probs=138.5
Q ss_pred CCceeEEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEe-cCCCCeeeEEecCCCCceEEEEeCCCcE
Q 014472 125 DGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLR-GHSTEGYGLSWSKFKEGHLLSGSDDAQI 203 (424)
Q Consensus 125 ~~~v~~i~~~p~~~~~latg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~-~h~~~v~~l~~~~~~~~~l~s~~~dg~i 203 (424)
...+.++++.+++. ++++.. ++.|.+|+.... ....+. .....+.++++.+++. ++++...++.|
T Consensus 66 ~~~p~~i~~~~~g~-l~v~~~-~~~i~~~d~~~~-----------~~~~~~~~~~~~p~~i~~~~~g~-l~v~~~~~~~i 131 (270)
T 1rwi_B 66 LYQPQGLAVDGAGT-VYVTDF-NNRVVTLAAGSN-----------NQTVLPFDGLNYPEGLAVDTQGA-VYVADRGNNRV 131 (270)
T ss_dssp CCSCCCEEECTTCC-EEEEET-TTEEEEECTTCS-----------CCEECCCCSCSSEEEEEECTTCC-EEEEEGGGTEE
T ss_pred cCCcceeEECCCCC-EEEEcC-CCEEEEEeCCCc-----------eEeeeecCCcCCCcceEECCCCC-EEEEECCCCEE
Confidence 35678899999886 666555 889999997651 112222 2235688999999876 66766678899
Q ss_pred EEEeCCCCCCCCcccceeeeecCCcceeeEEeeCCCCcEEEEEeCCCeEEEEECCCCCCCCCeeEecccCCCeeEEEecC
Q 014472 204 CLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNP 283 (424)
Q Consensus 204 ~vwd~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~~ 283 (424)
.+|+..+... ..........+.++++++++. ++++...++.|.+||...... ......+...+..|++++
T Consensus 132 ~~~~~~~~~~------~~~~~~~~~~p~~i~~~~~g~-l~v~~~~~~~i~~~~~~~~~~---~~~~~~~~~~p~~i~~d~ 201 (270)
T 1rwi_B 132 VKLAAGSKTQ------TVLPFTGLNDPDGVAVDNSGN-VYVTDTDNNRVVKLEAESNNQ---VVLPFTDITAPWGIAVDE 201 (270)
T ss_dssp EEECTTCCSC------EECCCCSCCSCCCEEECTTCC-EEEEEGGGTEEEEECTTTCCE---EECCCSSCCSEEEEEECT
T ss_pred EEEECCCcee------EeeccccCCCceeEEEeCCCC-EEEEECCCCEEEEEecCCCce---EeecccCCCCceEEEECC
Confidence 9997644321 111112234678999999886 776777788999999876442 111122336789999999
Q ss_pred CCCeEEEEEeCCCcEEEEECCCCCCcceeecCCCCCEEEEEEcCCCCcEEEEEeCCCeEEEeeCCCC
Q 014472 284 FNEWILATGSTDKTVKLFDLRKISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRI 350 (424)
Q Consensus 284 ~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~s~~~dg~i~iwd~~~~ 350 (424)
+|. ++++...++.|.+||... .........+...+.++++++++. ++++...++.|+++++...
T Consensus 202 ~g~-l~v~~~~~~~v~~~~~~~-~~~~~~~~~~~~~p~~i~~~~~g~-l~v~~~~~~~v~~~~~~~~ 265 (270)
T 1rwi_B 202 AGT-VYVTEHNTNQVVKLLAGS-TTSTVLPFTGLNTPLAVAVDSDRT-VYVADRGNDRVVKLTSLEH 265 (270)
T ss_dssp TCC-EEEEETTTSCEEEECTTC-SCCEECCCCSCSCEEEEEECTTCC-EEEEEGGGTEEEEECCCGG
T ss_pred CCC-EEEEECCCCcEEEEcCCC-CcceeeccCCCCCceeEEECCCCC-EEEEECCCCEEEEEcCCCc
Confidence 884 677777788999999875 222222222335789999999995 8888888999999998763
No 203
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.40 E-value=3.6e-11 Score=120.30 Aligned_cols=205 Identities=9% Similarity=0.008 Sum_probs=130.4
Q ss_pred cCCCCeeeEEecCCCCceEE-E----EeCCCcEEEEeCCCCCCCCcccceeeeecCCcceeeEEeeCCCCcEEEEEeCCC
Q 014472 176 GHSTEGYGLSWSKFKEGHLL-S----GSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQ 250 (424)
Q Consensus 176 ~h~~~v~~l~~~~~~~~~l~-s----~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~~s~~~dg 250 (424)
+|...+.+++|||+|+ +|+ + |+.+..|++||+.++..... ..+. ......++|+|+++.++ .++.+.
T Consensus 118 ~~~~~~~~~~~SPDG~-~la~~~~~~G~~~~~i~v~dl~tg~~~~~----~~~~--~~~~~~~~wspDg~~l~-~~~~d~ 189 (695)
T 2bkl_A 118 DGTVSLGTWAVSWDGK-KVAFAQKPNAADEAVLHVIDVDSGEWSKV----DVIE--GGKYATPKWTPDSKGFY-YEWLPT 189 (695)
T ss_dssp SSCEEEEEEEECTTSS-EEEEEEEETTCSCCEEEEEETTTCCBCSS----CCBS--CCTTCCCEECTTSSEEE-EEECCC
T ss_pred CCCEEEEEEEECCCCC-EEEEEECCCCCceEEEEEEECCCCCCcCC----cccC--cccccceEEecCCCEEE-EEEecC
Confidence 3555789999999998 455 3 33456899999988753200 0111 11126899999998655 566655
Q ss_pred e-------------EEEEECCCCCCC-CCeeEecccCCCeeEEEecCCCCeEEEEEeCC-C--cEEEEECCCCCCcceee
Q 014472 251 Y-------------LLIWDLRTPSVS-KPVQSVVAHQSEVNCLAFNPFNEWILATGSTD-K--TVKLFDLRKISTALHTF 313 (424)
Q Consensus 251 ~-------------i~i~d~~~~~~~-~~~~~~~~~~~~v~~i~~~~~~~~~l~~g~~d-g--~i~iwd~~~~~~~~~~~ 313 (424)
. |++|++.++... ..+.....+...+..+.|+|+|++++++.... + .|.++|... .....+
T Consensus 190 ~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~l~~~~~~~--~~~~~l 267 (695)
T 2bkl_A 190 DPSIKVDERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDGKYLFVYILRGWSENDVYWKRPGE--KDFRLL 267 (695)
T ss_dssp CTTSCGGGGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEECTTSCCEEEEEEETTTEEEEEEECTTC--SSCEEE
T ss_pred CCCCccccCCCCCEEEEEECCCCchhceEEEecCCCCEEEEEEEECCCCCEEEEEEeCCCCceEEEEEcCCC--CceEEe
Confidence 5 999999876521 11222233556789999999999755544433 3 566665443 345555
Q ss_pred cCCCCCEEEEEEcCCCCcEEEEEe---CCCeEEEeeCCCCCcccCCCccCCCCCeeeEEEcCC-CCCcceEEeCCCCCcE
Q 014472 314 DSHKEEVFQVGWNPKNETILASCC---LGRRLMVWDLSRIDEEQTPEDAEDGPPELLFIHGGH-TSKISDFSWNPCEDWV 389 (424)
Q Consensus 314 ~~~~~~v~~~~~sp~~~~~l~s~~---~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h-~~~v~~~~~~~~~~~~ 389 (424)
..+...+....| +++. +++.+. .++.|.+||+..+... ........+ ...+.+++|+ ++. +
T Consensus 268 ~~~~~~~~~~~~-~~g~-l~~~s~~~~~~~~l~~~d~~~~~~~-----------~~~~l~~~~~~~~l~~~~~~-~~~-l 332 (695)
T 2bkl_A 268 VKGVGAKYEVHA-WKDR-FYVLTDEGAPRQRVFEVDPAKPARA-----------SWKEIVPEDSSASLLSVSIV-GGH-L 332 (695)
T ss_dssp EECSSCCEEEEE-ETTE-EEEEECTTCTTCEEEEEBTTBCSGG-----------GCEEEECCCSSCEEEEEEEE-TTE-E
T ss_pred ecCCCceEEEEe-cCCc-EEEEECCCCCCCEEEEEeCCCCCcc-----------CCeEEecCCCCCeEEEEEEE-CCE-E
Confidence 556666677777 6665 666655 2578999998764311 011222222 4457788888 444 8
Q ss_pred EEEEeCCCcEEEEecC
Q 014472 390 ISSVAEDNILQIWQMA 405 (424)
Q Consensus 390 l~s~~~d~~i~iw~~~ 405 (424)
+++...|+..+||.+.
T Consensus 333 v~~~~~dg~~~l~~~~ 348 (695)
T 2bkl_A 333 SLEYLKDATSEVRVAT 348 (695)
T ss_dssp EEEEEETTEEEEEEEE
T ss_pred EEEEEECCEEEEEEEe
Confidence 8999999998888665
No 204
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.40 E-value=1.5e-09 Score=96.36 Aligned_cols=238 Identities=5% Similarity=-0.060 Sum_probs=155.9
Q ss_pred CCceeEEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCCeeeEEecCCCCceEEEEeCCCcEE
Q 014472 125 DGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDDAQIC 204 (424)
Q Consensus 125 ~~~v~~i~~~p~~~~~latg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~ 204 (424)
...+.++++.+++. +.++...++.|..||... ......+......+.++++.+++. ++++...++.|.
T Consensus 61 ~~~~~~i~~~~~g~-l~v~~~~~~~v~~~d~~g----------~~~~~~~~~~~~~~~~i~~~~~g~-l~v~~~~~~~i~ 128 (300)
T 2qc5_A 61 DAKVMCLIVSSLGD-IWFTENGANKIGKLSKKG----------GFTEYPLPQPDSGPYGITEGLNGD-IWFTQLNGDRIG 128 (300)
T ss_dssp TCCEEEEEECTTSC-EEEEETTTTEEEEECTTS----------CEEEEECSSTTCCEEEEEECSTTC-EEEEETTTTEEE
T ss_pred CCcceeEEECCCCC-EEEEecCCCeEEEECCCC----------CeEEecCCCCCCCCccceECCCCC-EEEEccCCCeEE
Confidence 36788999999886 666655678899998663 111112222346688999998776 566666678999
Q ss_pred EEeCCCCCCCCcccceeeeecCCcceeeEEeeCCCCcEEEEEeCCCeEEEEECCCCCCCCCeeEecccCCCeeEEEecCC
Q 014472 205 LWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPF 284 (424)
Q Consensus 205 vwd~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~~~ 284 (424)
.+|.. +.. .. .........+..+++.+++. ++++...++.|..+|. .+... ......+...+..++++++
T Consensus 129 ~~~~~-g~~----~~-~~~~~~~~~~~~i~~d~~g~-l~v~~~~~~~i~~~~~-~g~~~--~~~~~~~~~~~~~i~~d~~ 198 (300)
T 2qc5_A 129 KLTAD-GTI----YE-YDLPNKGSYPAFITLGSDNA-LWFTENQNNSIGRITN-TGKLE--EYPLPTNAAAPVGITSGND 198 (300)
T ss_dssp EECTT-SCE----EE-EECSSTTCCEEEEEECTTSS-EEEEETTTTEEEEECT-TCCEE--EEECSSTTCCEEEEEECTT
T ss_pred EECCC-CCE----EE-ccCCCCCCCceeEEECCCCC-EEEEecCCCeEEEECC-CCcEE--EeeCCCCCCCcceEEECCC
Confidence 99886 321 11 11222345788999999886 6666666789999998 43321 1112233457899999998
Q ss_pred CCeEEEEEeCCCcEEEEECCCCCCcce-eecCCCCCEEEEEEcCCCCcEEEEEeCCCeEEEeeCCCCCcccCCCccCCCC
Q 014472 285 NEWILATGSTDKTVKLFDLRKISTALH-TFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPEDAEDGP 363 (424)
Q Consensus 285 ~~~~l~~g~~dg~i~iwd~~~~~~~~~-~~~~~~~~v~~~~~sp~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~ 363 (424)
+. ++++....+.|.+||.. +.... ....+...+.++++++++. ++++...++.|..|+.. +.
T Consensus 199 g~-l~v~~~~~~~i~~~~~~--g~~~~~~~~~~~~~~~~i~~d~~g~-l~v~~~~~~~i~~~~~~-g~------------ 261 (300)
T 2qc5_A 199 GA-LWFVEIMGNKIGRITTT--GEISEYDIPTPNARPHAITAGKNSE-IWFTEWGANQIGRITND-NT------------ 261 (300)
T ss_dssp SS-EEEEETTTTEEEEECTT--CCEEEEECSSTTCCEEEEEECSTTC-EEEEETTTTEEEEECTT-SC------------
T ss_pred CC-EEEEccCCCEEEEEcCC--CcEEEEECCCCCCCceEEEECCCCC-EEEeccCCCeEEEECCC-Cc------------
Confidence 86 56666567789999983 33222 2333456789999999985 66666667889999983 21
Q ss_pred CeeeEEEcCCCCCcceEEeCCCCCcEEEEEeCCCcEEEEecC
Q 014472 364 PELLFIHGGHTSKISDFSWNPCEDWVISSVAEDNILQIWQMA 405 (424)
Q Consensus 364 ~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iw~~~ 405 (424)
...+........+.++++.++|. ++++.. . .|..+++.
T Consensus 262 -~~~~~~~~~~~~~~~i~~~~~g~-l~v~~~-~-~i~~~~p~ 299 (300)
T 2qc5_A 262 -IQEYQLQTENAEPHGITFGKDGS-VWFALK-C-KIGKLNLN 299 (300)
T ss_dssp -EEEEECCSTTCCCCCEEECTTSC-EEEECS-S-EEEEEEEC
T ss_pred -EEEEECCccCCccceeEeCCCCC-EEEEcc-C-ceEEeCCC
Confidence 11122233345688999999998 566544 4 67666653
No 205
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.40 E-value=1.6e-09 Score=99.44 Aligned_cols=250 Identities=10% Similarity=-0.052 Sum_probs=154.2
Q ss_pred EEeccCCceeEEEecCCCCcEEEEEe---------cCCeEEEEeCCCCCCCCCCCCCCCCcEEEecC-------CCCeee
Q 014472 120 QQINHDGEVNRARYMPQNPFLIATKT---------VSAEVYVFDYSKHPSKPPLDGACSPDLRLRGH-------STEGYG 183 (424)
Q Consensus 120 ~~~~h~~~v~~i~~~p~~~~~latg~---------~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~h-------~~~v~~ 183 (424)
..+.-...- .++++|+++.+.++.. .++.|.+||..+ .+....+.-. ......
T Consensus 61 ~~i~~g~~p-~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t----------~~~~~~i~~~~~~~~~~g~~p~~ 129 (373)
T 2mad_H 61 GHVNGGFLP-NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVT----------FLPIADIELPDAPRFDVGPYSWM 129 (373)
T ss_pred EEecCCCCC-CeEECCCCCEEEEEeccccccccCCCCCeEEEEECCC----------CcEEEEEECCCccccccCCCccc
Confidence 444433333 8999999985555432 367899999876 2223322211 123568
Q ss_pred EEecCCCCceEEEEeC--CCcEEEEeCCCCCCCCcccceee-eecCCcceeeEEeeCCCCcEEEEEeCCCeEEEEECCCC
Q 014472 184 LSWSKFKEGHLLSGSD--DAQICLWDINAAPKNKSLEAMQI-FKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTP 260 (424)
Q Consensus 184 l~~~~~~~~~l~s~~~--dg~i~vwd~~~~~~~~~~~~~~~-~~~~~~~v~~i~~~~~~~~~~~s~~~dg~i~i~d~~~~ 260 (424)
+.|+|+++ +|+++.. ++.|.++| .+++.. .. +. ... ++.+.|.++..+++.+.||.+.++|. ++
T Consensus 130 ~~~spDG~-~l~v~n~~~~~~v~viD-~t~~~~------~~~i~-~~~---~~~~~~~~~~~~~~~~~dg~~~~vd~-~g 196 (373)
T 2mad_H 130 NANTPNNA-DLLFFQFAAGPAVGLVV-QGGSSD------DQLLS-SPT---CYHIHPGAPSTFYLLCAQGGLAKTDH-AG 196 (373)
T ss_pred eEECCCCC-EEEEEecCCCCeEEEEE-CCCCEE------eEEcC-CCc---eEEEEeCCCceEEEEcCCCCEEEEEC-CC
Confidence 99999998 5666553 57899999 776332 22 11 111 25566777777888889999999999 65
Q ss_pred CCCCCeeEec-----ccCCCe-eEEEecCCCCeEEEEEeCCCcEEEEECCCCC-CcceeecC----------CCCCEEEE
Q 014472 261 SVSKPVQSVV-----AHQSEV-NCLAFNPFNEWILATGSTDKTVKLFDLRKIS-TALHTFDS----------HKEEVFQV 323 (424)
Q Consensus 261 ~~~~~~~~~~-----~~~~~v-~~i~~~~~~~~~l~~g~~dg~i~iwd~~~~~-~~~~~~~~----------~~~~v~~~ 323 (424)
+. ..... ....++ ....+.+++..++++. ..+.+.+.|+.... ..+..+.. .......+
T Consensus 197 ~~---~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~-~~~~v~vid~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~~ 272 (373)
T 2mad_H 197 GA---AGAGLVGAMLTAAQNLLTQPAQANKSGRIVWPV-YSGKILQADISAAGATNKAPIDALSGGRKADTWRPGGWQQV 272 (373)
T ss_pred cE---EEEEeccccccCCcceeecceeEecCCEEEEEc-CCceEEEEeccCCcceEeeeeeecCCcccccceecCceEeE
Confidence 53 21110 111221 2345666666544444 67899999997522 11222211 11234457
Q ss_pred EEcCCCCcEEEEEe---------CCCeEEEeeCCCCCcccCCCccCCCCCeeeEEEcCCCCCcceEEeCCCCCcEEEEEe
Q 014472 324 GWNPKNETILASCC---------LGRRLMVWDLSRIDEEQTPEDAEDGPPELLFIHGGHTSKISDFSWNPCEDWVISSVA 394 (424)
Q Consensus 324 ~~sp~~~~~l~s~~---------~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~ 394 (424)
.++|+++.++++.. .++.|.++|+.+. +.+..+.. .....+++|+|+|+++++++.
T Consensus 273 ~~s~d~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~--------------~vv~~i~~-g~~p~~i~~s~Dg~~~l~v~~ 337 (373)
T 2mad_H 273 AYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVG--------------QTSSQISL-GHDVDAISVAQDGGPDLYALS 337 (373)
T ss_pred EECCCCCEEEEEeccCCcccccCCCCeEEEEECCCC--------------EEEEEEEC-CCCcCeEEECCCCCeEEEEEc
Confidence 88999876555543 1357999999875 33344432 225799999999995566655
Q ss_pred -CCCcEEEEecCCCCCCCC
Q 014472 395 -EDNILQIWQMAENIYHDE 412 (424)
Q Consensus 395 -~d~~i~iw~~~~~~~~~~ 412 (424)
.++.|.++|+.++.....
T Consensus 338 ~~~~~V~ViD~~t~~vv~~ 356 (373)
T 2mad_H 338 AGTEVLHIYDAGAGDQDQS 356 (373)
T ss_pred CCCCeEEEEECCCCCEEee
Confidence 589999999998866544
No 206
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.33 E-value=3.3e-10 Score=102.35 Aligned_cols=202 Identities=6% Similarity=0.002 Sum_probs=134.2
Q ss_pred EEEeccCCceeEEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCC-----CCeeeEEecCCCCce
Q 014472 119 IQQINHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHS-----TEGYGLSWSKFKEGH 193 (424)
Q Consensus 119 ~~~~~h~~~v~~i~~~p~~~~~latg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~h~-----~~v~~l~~~~~~~~~ 193 (424)
+.++........+++++++ .++++...++.|.+||..+ .+....+.... .....+++ ++..+
T Consensus 77 ~~~i~~~~~p~~i~~~~~g-~lyv~~~~~~~v~~iD~~t----------~~~~~~i~~g~~~~~~~~p~~i~~--~~~~l 143 (328)
T 3dsm_A 77 VGRITGFTSPRYIHFLSDE-KAYVTQIWDYRIFIINPKT----------YEITGYIECPDMDMESGSTEQMVQ--YGKYV 143 (328)
T ss_dssp EEEEECCSSEEEEEEEETT-EEEEEEBSCSEEEEEETTT----------TEEEEEEECTTCCTTTCBCCCEEE--ETTEE
T ss_pred EEEcCCCCCCcEEEEeCCC-eEEEEECCCCeEEEEECCC----------CeEEEEEEcCCccccCCCcceEEE--ECCEE
Confidence 3445556788999999887 4666655789999999887 23233333222 14567777 34434
Q ss_pred EEEEe-CCCcEEEEeCCCCCCCCcccceeeeecCCcceeeEEeeCCCCcEEEEEeCC----------CeEEEEECCCCCC
Q 014472 194 LLSGS-DDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDD----------QYLLIWDLRTPSV 262 (424)
Q Consensus 194 l~s~~-~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~~s~~~d----------g~i~i~d~~~~~~ 262 (424)
+++.. .++.|.++|+.++.. ...+.. ......++++|+++ +++++..+ +.|.++|..+.+.
T Consensus 144 yv~~~~~~~~v~viD~~t~~~------~~~i~~-g~~p~~i~~~~dG~-l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v 215 (328)
T 3dsm_A 144 YVNCWSYQNRILKIDTETDKV------VDELTI-GIQPTSLVMDKYNK-MWTITDGGYEGSPYGYEAPSLYRIDAETFTV 215 (328)
T ss_dssp EEEECTTCCEEEEEETTTTEE------EEEEEC-SSCBCCCEECTTSE-EEEEBCCBCTTCSSCBCCCEEEEEETTTTEE
T ss_pred EEEcCCCCCEEEEEECCCCeE------EEEEEc-CCCccceEEcCCCC-EEEEECCCccCCccccCCceEEEEECCCCeE
Confidence 44443 488999999987632 222222 33467899999986 55555444 7899999987653
Q ss_pred CCCeeEeccc-CCCeeEEEecCCCCeEEEEEeCCCcEEEEECCCCCCcce-e-ecCCCCCEEEEEEcCCCCcEEEEE---
Q 014472 263 SKPVQSVVAH-QSEVNCLAFNPFNEWILATGSTDKTVKLFDLRKISTALH-T-FDSHKEEVFQVGWNPKNETILASC--- 336 (424)
Q Consensus 263 ~~~~~~~~~~-~~~v~~i~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~-~-~~~~~~~v~~~~~sp~~~~~l~s~--- 336 (424)
...+... ......++++|+++. |.++.. .|.+||..+ ++... . +.........++++|++..++++.
T Consensus 216 ---~~~~~~~~g~~p~~la~~~d~~~-lyv~~~--~v~~~d~~t-~~~~~~~~~~~~~~~p~gi~vdp~~g~lyva~~~~ 288 (328)
T 3dsm_A 216 ---EKQFKFKLGDWPSEVQLNGTRDT-LYWINN--DIWRMPVEA-DRVPVRPFLEFRDTKYYGLTVNPNNGEVYVADAID 288 (328)
T ss_dssp ---EEEEECCTTCCCEEEEECTTSCE-EEEESS--SEEEEETTC-SSCCSSCSBCCCSSCEEEEEECTTTCCEEEEECTT
T ss_pred ---EEEEecCCCCCceeEEEecCCCE-EEEEcc--EEEEEECCC-CceeeeeeecCCCCceEEEEEcCCCCeEEEEcccc
Confidence 3333221 246899999999985 444433 899999986 33321 1 222246789999999666677777
Q ss_pred -eCCCeEEEeeCC
Q 014472 337 -CLGRRLMVWDLS 348 (424)
Q Consensus 337 -~~dg~i~iwd~~ 348 (424)
..++.|.+||..
T Consensus 289 y~~~~~V~v~d~~ 301 (328)
T 3dsm_A 289 YQQQGIVYRYSPQ 301 (328)
T ss_dssp SSSEEEEEEECTT
T ss_pred cccCCEEEEECCC
Confidence 678899999987
No 207
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.30 E-value=1.6e-09 Score=96.71 Aligned_cols=228 Identities=11% Similarity=0.038 Sum_probs=146.3
Q ss_pred ccCCceeEEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCCeeeEEecCCCCceEEEEeCCCc
Q 014472 123 NHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDDAQ 202 (424)
Q Consensus 123 ~h~~~v~~i~~~p~~~~~latg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~ 202 (424)
..........|+|++..+++++..++.|..|+... . ...+..+...+.++++.+++. ++++...++.
T Consensus 42 ~~~~~~egp~~~~~g~~l~~~d~~~~~i~~~~~~g-----------~-~~~~~~~~~~~~gl~~d~dG~-l~v~~~~~~~ 108 (305)
T 3dr2_A 42 DQATWSEGPAWWEAQRTLVWSDLVGRRVLGWREDG-----------T-VDVLLDATAFTNGNAVDAQQR-LVHCEHGRRA 108 (305)
T ss_dssp CCCSSEEEEEEEGGGTEEEEEETTTTEEEEEETTS-----------C-EEEEEESCSCEEEEEECTTSC-EEEEETTTTE
T ss_pred cCCcCccCCeEeCCCCEEEEEECCCCEEEEEeCCC-----------C-EEEEeCCCCccceeeECCCCC-EEEEECCCCE
Confidence 44556778999999887888888899999998743 1 234555667789999999886 5555555678
Q ss_pred EEEEeCCCCCCCCccccee-eeec-CCcceeeEEeeCCCCcEEEE----EeC-------------CCeEEEEECCCCCCC
Q 014472 203 ICLWDINAAPKNKSLEAMQ-IFKV-HEGVVEDVAWHLRHEYLFGS----VGD-------------DQYLLIWDLRTPSVS 263 (424)
Q Consensus 203 i~vwd~~~~~~~~~~~~~~-~~~~-~~~~v~~i~~~~~~~~~~~s----~~~-------------dg~i~i~d~~~~~~~ 263 (424)
|.+|+.. +.. ..+. ...+ ....++++++++++. ++++ |.. .+.|..+|..+++.
T Consensus 109 v~~~~~~-g~~----~~~~~~~~~~~~~~~~~i~~d~dG~-l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~- 181 (305)
T 3dr2_A 109 ITRSDAD-GQA----HLLVGRYAGKRLNSPNDLIVARDGA-IWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPL- 181 (305)
T ss_dssp EEEECTT-SCE----EEEECEETTEECSCCCCEEECTTSC-EEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCC-
T ss_pred EEEECCC-CCE----EEEEeccCCCccCCCCCEEECCCCC-EEEeCcCCCccccccccccccccCCCeEEEEcCCCCcE-
Confidence 9999975 321 1111 1111 123577899999986 5544 221 25678888766553
Q ss_pred CCeeEecccCCCeeEEEecCCCCeEEEEEeCC------CcEEEEECCCCCCcce---ee-cCCCCCEEEEEEcCCCCcEE
Q 014472 264 KPVQSVVAHQSEVNCLAFNPFNEWILATGSTD------KTVKLFDLRKISTALH---TF-DSHKEEVFQVGWNPKNETIL 333 (424)
Q Consensus 264 ~~~~~~~~~~~~v~~i~~~~~~~~~l~~g~~d------g~i~iwd~~~~~~~~~---~~-~~~~~~v~~~~~sp~~~~~l 333 (424)
..+. .....+.++|+|++..+ +.+... +.|.+||+...+ +. .+ .........++++++|. +.
T Consensus 182 ---~~~~-~~~~p~gl~~spdg~~l-yv~~~~~~~~~~~~i~~~~~~~~~--l~~~~~~~~~~~~~pdgi~~d~~G~-lw 253 (305)
T 3dr2_A 182 ---QRMA-DLDHPNGLAFSPDEQTL-YVSQTPEQGHGSVEITAFAWRDGA--LHDRRHFASVPDGLPDGFCVDRGGW-LW 253 (305)
T ss_dssp ---EEEE-EESSEEEEEECTTSSEE-EEEECCC---CCCEEEEEEEETTE--EEEEEEEECCSSSCCCSEEECTTSC-EE
T ss_pred ---EEEe-cCCCCcceEEcCCCCEE-EEEecCCcCCCCCEEEEEEecCCC--ccCCeEEEECCCCCCCeEEECCCCC-EE
Confidence 2222 34567889999999854 444443 789999987522 11 11 11234456789999996 44
Q ss_pred EEEeCCCeEEEeeCCCCCcccCCCccCCCCCeeeEEEcCCCCCcceEEeCCCCCcEEEEEeCCC
Q 014472 334 ASCCLGRRLMVWDLSRIDEEQTPEDAEDGPPELLFIHGGHTSKISDFSWNPCEDWVISSVAEDN 397 (424)
Q Consensus 334 ~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~ 397 (424)
++ +.+| |.+|+... ..+..+..+. .+..++|+++++.++++ +.++
T Consensus 254 v~-~~~g-v~~~~~~g---------------~~~~~~~~~~-~~~~~~f~~d~~~L~it-~~~~ 298 (305)
T 3dr2_A 254 SS-SGTG-VCVFDSDG---------------QLLGHIPTPG-TASNCTFDQAQQRLFIT-GGPC 298 (305)
T ss_dssp EC-CSSE-EEEECTTS---------------CEEEEEECSS-CCCEEEECTTSCEEEEE-ETTE
T ss_pred Ee-cCCc-EEEECCCC---------------CEEEEEECCC-ceeEEEEeCCCCEEEEE-cCCe
Confidence 43 4454 99998743 3333443333 48899999998855554 4454
No 208
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=99.29 E-value=1.4e-10 Score=105.50 Aligned_cols=260 Identities=13% Similarity=0.105 Sum_probs=151.6
Q ss_pred CcEEEEEEeccCCceeEEEecCCCCcEEEEEe--cCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCCeeeEEecCCCC
Q 014472 114 GKVQIIQQINHDGEVNRARYMPQNPFLIATKT--VSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKE 191 (424)
Q Consensus 114 ~~~~~~~~~~h~~~v~~i~~~p~~~~~latg~--~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~ 191 (424)
+.++.+..+. ..+..++++|++. ++++.. .++.++||.+... ..... .... .....|-..+.++++.+++.
T Consensus 7 g~~~~v~~~~--~~p~~va~~~~g~-~~v~~~~~~~~~~~l~~~~~g-~~~~~-p~~~--~~~~~~~~~p~gv~~d~~g~ 79 (343)
T 2qe8_A 7 DRLEVVAELS--LAPGNITLTPDGR-LFLSLHQFYQPEMQVAELTQD-GLIPF-PPQS--GNAIITFDTVLGIKSDGNGI 79 (343)
T ss_dssp -CCEEEEEES--SCEEEEEECTTSC-EEEEECGGGCCSCSEEEEETT-EEEES-CCCC--SSCCCCCSCEEEEEECSSSE
T ss_pred ceeEEEEEcC--CCcceEEECCCCC-EEEEeCCCCCCceEEEEECCC-CeecC-CCcc--cCcccceeEeeEEEEcCCCc
Confidence 4566666655 7889999999986 676653 2343556655421 00000 0000 01123556799999999865
Q ss_pred ceEEEEeC-----CCcEEEEeCCCCCCCCcccceeeeecCCcceeeEEeeCCCCcEEEEEe---CCCeEEEEECCCCCCC
Q 014472 192 GHLLSGSD-----DAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVG---DDQYLLIWDLRTPSVS 263 (424)
Q Consensus 192 ~~l~s~~~-----dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~~s~~---~dg~i~i~d~~~~~~~ 263 (424)
++++-.. ++.|.+||+.+++....+........+...++++++++++..++++.. .++.|.+||+.+++.
T Consensus 80 -L~v~D~g~~~~~~~~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~- 157 (343)
T 2qe8_A 80 -VWMLDNGNQSKSVPKLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGLA- 157 (343)
T ss_dssp -EEEEECHHHHTSCCEEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCCE-
T ss_pred -EEEEcCCCCcCCCCeEEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCCE-
Confidence 4444332 578999999876321111100000122345789999987667776766 688999999976542
Q ss_pred CCeeEeccc-----------------------------CCCeeEEEecCCCCeEEEEEeCCC-cEEEEECCCC--CC---
Q 014472 264 KPVQSVVAH-----------------------------QSEVNCLAFNPFNEWILATGSTDK-TVKLFDLRKI--ST--- 308 (424)
Q Consensus 264 ~~~~~~~~~-----------------------------~~~v~~i~~~~~~~~~l~~g~~dg-~i~iwd~~~~--~~--- 308 (424)
...+..| ...++.|+|+|+++. |+.+...+ .+..++.... ..
T Consensus 158 --~r~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~-ly~~~~~~~~l~~~~~~~~~~~~~~~ 234 (343)
T 2qe8_A 158 --ARVLQGYPGIAPEDIDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEW-LYLSPMHSTSMYRIKSADLSNLQLTD 234 (343)
T ss_dssp --EEECTTCTTTSCCSCCCEETTEECBEECTTSCEECCCCCEEEEEECTTSCE-EEEEESSCSEEEEEEHHHHTCTTCCH
T ss_pred --EEEecCCCcccccccceeECCEEEEeccCCCceeceecccceeEeccCCCE-EEEEeCCCCeEEEEEHHHhcCCCCCh
Confidence 1111110 124688999999985 55555444 5655553210 00
Q ss_pred --cce--eecCCCCCEEEEEEcCCCCcEEEEEeCCCeEEEeeCCCCCcccCCCccCCCCCeeeEEEcCCCCCcceEEeCC
Q 014472 309 --ALH--TFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPEDAEDGPPELLFIHGGHTSKISDFSWNP 384 (424)
Q Consensus 309 --~~~--~~~~~~~~v~~~~~sp~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~ 384 (424)
... ...++......+++++++. ++++...++.|.+||...+.. ..+.. ..+...+.+++|.+
T Consensus 235 ~~~~~~~~~~g~~g~pdgia~d~~G~-l~va~~~~~~V~~~d~~~G~~------------~~~~~-~~~~~~p~~va~~~ 300 (343)
T 2qe8_A 235 AELGSKIERYSEKPICDGISIDKDHN-IYVGDLAHSAIGVITSADRAY------------KLLVT-DEKLSWTDSFNFGS 300 (343)
T ss_dssp HHHHTTCEEEEECCSCSCEEECTTCC-EEEEEGGGTEEEEEETTTTEE------------EEEEE-CGGGSCEEEEEECT
T ss_pred hhhhcceEecccCCCCceEEECCCCC-EEEEccCCCeEEEEECCCCCE------------EEEEE-CCceecCCeeEECC
Confidence 000 1112344567899999984 788888899999999843210 11211 11244588999999
Q ss_pred CCCcEEEEEeCCCcEE
Q 014472 385 CEDWVISSVAEDNILQ 400 (424)
Q Consensus 385 ~~~~~l~s~~~d~~i~ 400 (424)
++. ++++.+..+.+.
T Consensus 301 ~g~-l~v~~~~~~~~~ 315 (343)
T 2qe8_A 301 DGY-LYFDCNQLHHSA 315 (343)
T ss_dssp TSC-EEEEECCGGGSG
T ss_pred CCc-EEEEeCcccccc
Confidence 988 677766544443
No 209
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.28 E-value=4.9e-10 Score=98.45 Aligned_cols=183 Identities=11% Similarity=0.039 Sum_probs=132.4
Q ss_pred eEEEEeCCCcEEEEeCCCCCCCCcccceeeeecCC-cceeeEEeeCCCCcEEEEEeCCCeEEEEECCCCCCCCCeeEecc
Q 014472 193 HLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHE-GVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVA 271 (424)
Q Consensus 193 ~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~-~~v~~i~~~~~~~~~~~s~~~dg~i~i~d~~~~~~~~~~~~~~~ 271 (424)
+|++++.++.|.+||..+++. +..+..+. ..+.++.++|+++ +++ +.++.|..||. +++. +..+..
T Consensus 7 ~lv~~~~~~~v~~~d~~tG~~------~w~~~~~~~~~~~~~~~~pdG~-ilv--s~~~~V~~~d~-~G~~---~W~~~~ 73 (276)
T 3no2_A 7 LLVGGSGWNKIAIINKDTKEI------VWEYPLEKGWECNSVAATKAGE-ILF--SYSKGAKMITR-DGRE---LWNIAA 73 (276)
T ss_dssp EEEECTTCSEEEEEETTTTEE------EEEEECCTTCCCCEEEECTTSC-EEE--ECBSEEEEECT-TSCE---EEEEEC
T ss_pred EEEeeCCCCEEEEEECCCCeE------EEEeCCCccCCCcCeEECCCCC-EEE--eCCCCEEEECC-CCCE---EEEEcC
Confidence 799999999999999977743 34444444 4688999999986 554 45788999998 6553 455544
Q ss_pred c-CCCeeEEEecCCCCeEEEEEeC-CCcEEEEECCCCCCcceeecC------CCCCEEEEEEcCCCCcEEEEEeCCCeEE
Q 014472 272 H-QSEVNCLAFNPFNEWILATGST-DKTVKLFDLRKISTALHTFDS------HKEEVFQVGWNPKNETILASCCLGRRLM 343 (424)
Q Consensus 272 ~-~~~v~~i~~~~~~~~~l~~g~~-dg~i~iwd~~~~~~~~~~~~~------~~~~v~~~~~sp~~~~~l~s~~~dg~i~ 343 (424)
+ ...+.++.+.++|. ++++.+. ++.|..+|.. ++.+..+.. +......+++.+++. ++++...++.|.
T Consensus 74 ~~~~~~~~~~~~~dG~-~lv~~~~~~~~v~~vd~~--Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~-~lv~~~~~~~v~ 149 (276)
T 3no2_A 74 PAGCEMQTARILPDGN-ALVAWCGHPSTILEVNMK--GEVLSKTEFETGIERPHAQFRQINKNKKGN-YLVPLFATSEVR 149 (276)
T ss_dssp CTTCEEEEEEECTTSC-EEEEEESTTEEEEEECTT--SCEEEEEEECCSCSSGGGSCSCCEECTTSC-EEEEETTTTEEE
T ss_pred CCCccccccEECCCCC-EEEEecCCCCEEEEEeCC--CCEEEEEeccCCCCcccccccCceECCCCC-EEEEecCCCEEE
Confidence 3 34788999999998 4666665 6777777753 555555432 112455667889986 788888999999
Q ss_pred EeeCCCCCcccCCCccCCCCCeeeEEEcCCCCCcceEEeCCCCCcEEEEEeCCCcEEEEecCCCCC
Q 014472 344 VWDLSRIDEEQTPEDAEDGPPELLFIHGGHTSKISDFSWNPCEDWVISSVAEDNILQIWQMAENIY 409 (424)
Q Consensus 344 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~ 409 (424)
.||.. + +.+..+..+ ..+.++...+++. ++++++.++.|..+|..++.+
T Consensus 150 ~~d~~-G--------------~~~w~~~~~-~~~~~~~~~~~g~-~~v~~~~~~~v~~~d~~tG~~ 198 (276)
T 3no2_A 150 EIAPN-G--------------QLLNSVKLS-GTPFSSAFLDNGD-CLVACGDAHCFVQLNLESNRI 198 (276)
T ss_dssp EECTT-S--------------CEEEEEECS-SCCCEEEECTTSC-EEEECBTTSEEEEECTTTCCE
T ss_pred EECCC-C--------------CEEEEEECC-CCccceeEcCCCC-EEEEeCCCCeEEEEeCcCCcE
Confidence 99987 5 445555543 3467788899998 677778788999999986644
No 210
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.23 E-value=7.6e-09 Score=91.97 Aligned_cols=209 Identities=10% Similarity=0.087 Sum_probs=135.8
Q ss_pred CCCCeeeEEecCCCCceEEEEeCCCcEEEEeCCCCCCCCcccceeeeecCCcceeeEEeeCCCCcEEEEEeCCCeEEEEE
Q 014472 177 HSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWD 256 (424)
Q Consensus 177 h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~~s~~~dg~i~i~d 256 (424)
+..-.-+..|++++..++++...++.|..||..++.. ..+ .....+.++++++++. ++++ . ++.|.+||
T Consensus 11 ~~~~~Egp~w~~~~~~l~~~d~~~~~i~~~d~~~~~~-------~~~-~~~~~~~~i~~~~dG~-l~v~-~-~~~l~~~d 79 (297)
T 3g4e_A 11 NCRCGESPVWEEVSNSLLFVDIPAKKVCRWDSFTKQV-------QRV-TMDAPVSSVALRQSGG-YVAT-I-GTKFCALN 79 (297)
T ss_dssp CCSBEEEEEEETTTTEEEEEETTTTEEEEEETTTCCE-------EEE-ECSSCEEEEEEBTTSS-EEEE-E-TTEEEEEE
T ss_pred CCccccCCeEECCCCEEEEEECCCCEEEEEECCCCcE-------EEE-eCCCceEEEEECCCCC-EEEE-E-CCeEEEEE
Confidence 3344568999997766777777889999999976521 112 2456799999999997 5533 3 56899999
Q ss_pred CCCCCCCCCeeEecc--cCCCeeEEEecCCCCeEEEEEeC---------CCcEEEEECCCCCCcceeecCCCCCEEEEEE
Q 014472 257 LRTPSVSKPVQSVVA--HQSEVNCLAFNPFNEWILATGST---------DKTVKLFDLRKISTALHTFDSHKEEVFQVGW 325 (424)
Q Consensus 257 ~~~~~~~~~~~~~~~--~~~~v~~i~~~~~~~~~l~~g~~---------dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~ 325 (424)
..++.. ..+..... ....++.++++|+|. ++++... ...-.||.+...+. +..+..+......++|
T Consensus 80 ~~~g~~-~~~~~~~~~~~~~~~~di~~d~dG~-l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~-~~~~~~~~~~pngi~~ 156 (297)
T 3g4e_A 80 WKEQSA-VVLATVDNDKKNNRFNDGKVDPAGR-YFAGTMAEETAPAVLERHQGALYSLFPDHH-VKKYFDQVDISNGLDW 156 (297)
T ss_dssp TTTTEE-EEEEECCTTCSSEEEEEEEECTTSC-EEEEEEECCSBTTBCCTTCEEEEEECTTSC-EEEEEEEESBEEEEEE
T ss_pred CCCCcE-EEEEecCCCCCCCCCCCEEECCCCC-EEEecCCcccccccccCCCcEEEEEECCCC-EEEEeeccccccceEE
Confidence 987542 11111111 123578899999998 4444322 12345555543232 2223333445689999
Q ss_pred cCCCCcEEEEEeCCCeEEEeeCC--CCCcccCCCccCCCCCeeeEEEcCCCCCcceEEeCCCCCcEEEEEeCCCcEEEEe
Q 014472 326 NPKNETILASCCLGRRLMVWDLS--RIDEEQTPEDAEDGPPELLFIHGGHTSKISDFSWNPCEDWVISSVAEDNILQIWQ 403 (424)
Q Consensus 326 sp~~~~~l~s~~~dg~i~iwd~~--~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iw~ 403 (424)
+|+++.++++.+.++.|.+|++. .+... ..+.+..+..+...+..+++.++|. +.++...++.|.+|+
T Consensus 157 spdg~~lyv~~~~~~~i~~~~~d~~~G~~~---------~~~~~~~~~~~~~~p~g~~~d~~G~-lwva~~~~~~v~~~d 226 (297)
T 3g4e_A 157 SLDHKIFYYIDSLSYSVDAFDYDLQTGQIS---------NRRSVYKLEKEEQIPDGMCIDAEGK-LWVACYNGGRVIRLD 226 (297)
T ss_dssp CTTSCEEEEEEGGGTEEEEEEECTTTCCEE---------EEEEEEECCGGGCEEEEEEEBTTSC-EEEEEETTTEEEEEC
T ss_pred cCCCCEEEEecCCCCcEEEEeccCCCCccc---------CcEEEEECCCCCCCCCeeEECCCCC-EEEEEcCCCEEEEEc
Confidence 99998667777778999999874 22110 0122333333345678899999998 777777788899999
Q ss_pred cCCCCC
Q 014472 404 MAENIY 409 (424)
Q Consensus 404 ~~~~~~ 409 (424)
..++.+
T Consensus 227 ~~tG~~ 232 (297)
T 3g4e_A 227 PVTGKR 232 (297)
T ss_dssp TTTCCE
T ss_pred CCCceE
Confidence 986654
No 211
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.23 E-value=5.4e-09 Score=95.01 Aligned_cols=252 Identities=14% Similarity=0.035 Sum_probs=153.0
Q ss_pred EEEEeccCCceeEEEecCCCCcEEEEEe---------cCCeEEEEeCCCCCCCCCCCCCCCCcEEEecC-------CCCe
Q 014472 118 IIQQINHDGEVNRARYMPQNPFLIATKT---------VSAEVYVFDYSKHPSKPPLDGACSPDLRLRGH-------STEG 181 (424)
Q Consensus 118 ~~~~~~h~~~v~~i~~~p~~~~~latg~---------~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~h-------~~~v 181 (424)
++.++.-..... ++++|+++.++++.. .++.|.+||..+ .+....+.-. ....
T Consensus 71 v~~~I~vG~~P~-va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~t----------~~v~~~I~v~~g~r~~~g~~P 139 (386)
T 3sjl_D 71 VIGMIDGGFLPN-PVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVT----------LLPTADIELPDAPRFLVGTYP 139 (386)
T ss_dssp EEEEEEECSSCE-EEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTT----------CCEEEEEEETTCCCCCBSCCG
T ss_pred EEEEEECCCCCc-EEECCCCCEEEEEcccccccccCCCCCEEEEEECCC----------CeEEEEEECCCccccccCCCC
Confidence 344554333334 999999986656542 367899999987 3444444321 1246
Q ss_pred eeEEecCCCCceEEEEeC--CCcEEEEeCCCCCCCCcccceeeeecCCcceeeEEeeCCCCcEEEEEeCCCeEEEEECCC
Q 014472 182 YGLSWSKFKEGHLLSGSD--DAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRT 259 (424)
Q Consensus 182 ~~l~~~~~~~~~l~s~~~--dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~~s~~~dg~i~i~d~~~ 259 (424)
..++++|++. +|+++.. ++.|.++|+.+.+. +..+.. .+ . ....|.+...|++.+.||.+.+.++..
T Consensus 140 ~~~a~spDGk-~lyVan~~~~~~VsVID~~t~~v------v~tI~v-~g-~--~~~~P~g~~~~~~~~~DG~~~~v~~~~ 208 (386)
T 3sjl_D 140 WMTSLTPDGK-TLLFYQFSPAPAVGVVDLEGKAF------KRMLDV-PD-C--YHIFPTAPDTFFMHCRDGSLAKVAFGT 208 (386)
T ss_dssp GGEEECTTSS-EEEEEECSSSCEEEEEETTTTEE------EEEEEC-CS-E--EEEEEEETTEEEEEETTSCEEEEECCS
T ss_pred ceEEEcCCCC-EEEEEEcCCCCeEEEEECCCCcE------EEEEEC-CC-c--ceeecCCCceeEEECCCCCEEEEECCC
Confidence 7899999998 4555543 68999999987633 222221 11 1 122355555666888899999999876
Q ss_pred -CCCCCCeeEeccc----CCCee-EEEec-CCCCeEEEEEeCCCcEEEEECCCCC-Ccceeec----------CCCCCEE
Q 014472 260 -PSVSKPVQSVVAH----QSEVN-CLAFN-PFNEWILATGSTDKTVKLFDLRKIS-TALHTFD----------SHKEEVF 321 (424)
Q Consensus 260 -~~~~~~~~~~~~~----~~~v~-~i~~~-~~~~~~l~~g~~dg~i~iwd~~~~~-~~~~~~~----------~~~~~v~ 321 (424)
++. ......+ ..++. ...|. ++|. +++ .+.+|.|++.|+.... ..+..+. .......
T Consensus 209 ~g~v---~~~~~~~~~~~~~~~~~~~~~~~~dG~-~~~-vs~~g~V~v~d~~~~~~~v~~~~~~~~~~~~~~g~~p~g~q 283 (386)
T 3sjl_D 209 EGTP---EITHTEVFHPEDEFLINHPAYSQKAGR-LVW-PTYTGKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQ 283 (386)
T ss_dssp SSCC---EEEECCCCSCTTSCBCSCCEEETTTTE-EEE-EBTTSEEEEEECTTSSCEECCCEESSCHHHHHTTEEECSSS
T ss_pred CCeE---EEeecceeccccccccccceeEcCCCc-EEE-EeCCCEEEEEECCCCcceeecceeccccccccccccCCCcc
Confidence 332 1111111 12221 24554 5564 333 5568999999997522 1222221 0112334
Q ss_pred EEEEcCCCCcEEEEEeC---------CCeEEEeeCCCCCcccCCCccCCCCCeeeEEEcCCCCCcceEEeCCCCC-cEEE
Q 014472 322 QVGWNPKNETILASCCL---------GRRLMVWDLSRIDEEQTPEDAEDGPPELLFIHGGHTSKISDFSWNPCED-WVIS 391 (424)
Q Consensus 322 ~~~~sp~~~~~l~s~~~---------dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~-~~l~ 391 (424)
.+++++++..++++... .+.|.++|+.+.+. +..+.- ...+++++++++++ .+++
T Consensus 284 ~~a~~~~~~~lyV~~~~~~~~~hk~~~~~V~viD~~t~kv--------------~~~i~v-g~~~~~lavs~D~~~~ly~ 348 (386)
T 3sjl_D 284 QVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGER--------------LAKFEM-GHEIDSINVSQDEKPLLYA 348 (386)
T ss_dssp CEEEETTTTEEEEEEEECCTTCTTSCEEEEEEEETTTCCE--------------EEEEEE-EEEECEEEECSSSSCEEEE
T ss_pred eeeECCCCCeEEEEeccccccccCCCCCEEEEEECCCCeE--------------EEEEEC-CCCcceEEECCCCCeEEEE
Confidence 57779988766655432 25699999988642 222211 12588999999996 4455
Q ss_pred EEeCCCcEEEEecCCCCCCC
Q 014472 392 SVAEDNILQIWQMAENIYHD 411 (424)
Q Consensus 392 s~~~d~~i~iw~~~~~~~~~ 411 (424)
+...++.|.++|..++....
T Consensus 349 tn~~~~~VsViD~~t~k~~~ 368 (386)
T 3sjl_D 349 LSTGDKTLYIHDAESGEELR 368 (386)
T ss_dssp EETTTTEEEEEETTTCCEEE
T ss_pred EcCCCCeEEEEECCCCcEEE
Confidence 55668999999999886643
No 212
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.22 E-value=2.1e-09 Score=100.09 Aligned_cols=200 Identities=8% Similarity=0.032 Sum_probs=132.2
Q ss_pred CeeeEEecCCCCceEEEEeCCCcEEEEeCCCCCCCCcccceeeeecCCcceeeEEeeCCCCcEEEEEeCCC--eEEEEEC
Q 014472 180 EGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQ--YLLIWDL 257 (424)
Q Consensus 180 ~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~~s~~~dg--~i~i~d~ 257 (424)
....|+|++++. ++++...++.|++||+.++.. ..+........ ++|++++..++ ++..++ .|.+++.
T Consensus 132 ~P~~la~d~~g~-lyv~d~~~~~I~~id~~~g~~-------~~~~~~~~~~~-ia~~~~g~~l~-~~d~~~~~~I~~~d~ 201 (409)
T 3hrp_A 132 YMWGIAAVGNNT-VLAYQRDDPRVRLISVDDNKV-------TTVHPGFKGGK-PAVTKDKQRVY-SIGWEGTHTVYVYMK 201 (409)
T ss_dssp CEEEEEECSTTE-EEEEETTTTEEEEEETTTTEE-------EEEEETCCBCB-CEECTTSSEEE-EEBSSTTCEEEEEEG
T ss_pred CceEEEEeCCCC-EEEEecCCCcEEEEECCCCEE-------EEeeccCCCCc-eeEecCCCcEE-EEecCCCceEEEEEc
Confidence 578999999876 677767779999999976521 11211223334 99999998665 555544 8999988
Q ss_pred CCCCCCCCeeEe---cc-cCCCeeEEEecCCCCeEEEEEeCCCcEEEEECCCCCCcceee-----cCCCCCE--EEEEEc
Q 014472 258 RTPSVSKPVQSV---VA-HQSEVNCLAFNPFNEWILATGSTDKTVKLFDLRKISTALHTF-----DSHKEEV--FQVGWN 326 (424)
Q Consensus 258 ~~~~~~~~~~~~---~~-~~~~v~~i~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~-----~~~~~~v--~~~~~s 326 (424)
..... ...+ .. ....+.+++++|++..+++ +..++.|+.||.... . ...+ .++...- ..++|+
T Consensus 202 ~~~~~---~~~~g~~~~~~~~~p~~iav~p~~g~lyv-~d~~~~I~~~d~~~~-~-~~~~~~~~~~g~~~~~P~~~ia~~ 275 (409)
T 3hrp_A 202 ASGWA---PTRIGQLGSTFSGKIGAVALDETEEWLYF-VDSNKNFGRFNVKTQ-E-VTLIKQLELSGSLGTNPGPYLIYY 275 (409)
T ss_dssp GGTTC---EEEEEECCTTSCSCCCBCEECTTSSEEEE-ECTTCEEEEEETTTC-C-EEEEEECCCCSCCCCSSCCEEEEE
T ss_pred CCCce---eEEeeeccchhcCCcEEEEEeCCCCeEEE-EECCCcEEEEECCCC-C-EEEEecccccCCCCCCccccEEEe
Confidence 76442 2222 12 4567889999996555454 667889999999863 2 2222 1222222 399999
Q ss_pred CCCCcEEEEEeCCCeEEEeeCCCCCcccCCCccCCCCCeeeEEEc------------CCCCCcceEEeCCCCCcEEEEEe
Q 014472 327 PKNETILASCCLGRRLMVWDLSRIDEEQTPEDAEDGPPELLFIHG------------GHTSKISDFSWNPCEDWVISSVA 394 (424)
Q Consensus 327 p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~------------~h~~~v~~~~~~~~~~~~l~s~~ 394 (424)
|++..++++...++.|+.|+..... ..+.-.. ..-.....++++++|. ++++-.
T Consensus 276 p~~g~lyv~d~~~~~I~~~~~~g~~-------------~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~-lyvad~ 341 (409)
T 3hrp_A 276 FVDSNFYMSDQNLSSVYKITPDGEC-------------EWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGN-FYIVDG 341 (409)
T ss_dssp TTTTEEEEEETTTTEEEEECTTCCE-------------EEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCC-EEEEET
T ss_pred CCCCEEEEEeCCCCEEEEEecCCCE-------------EEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCC-EEEEeC
Confidence 9655677777788899999876420 1110000 0113478899999999 788877
Q ss_pred -CCCcEEEEecCCCCC
Q 014472 395 -EDNILQIWQMAENIY 409 (424)
Q Consensus 395 -~d~~i~iw~~~~~~~ 409 (424)
.+++|+.|++.++.+
T Consensus 342 ~~~~~I~~~~~~~G~v 357 (409)
T 3hrp_A 342 FKGYCLRKLDILDGYV 357 (409)
T ss_dssp TTTCEEEEEETTTTEE
T ss_pred CCCCEEEEEECCCCEE
Confidence 889999999766643
No 213
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.22 E-value=3.1e-09 Score=95.06 Aligned_cols=202 Identities=10% Similarity=0.109 Sum_probs=134.1
Q ss_pred cCCceeEEEecCC-CCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEE-e-----cCCCCeeeEEecCCCCceEEE
Q 014472 124 HDGEVNRARYMPQ-NPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRL-R-----GHSTEGYGLSWSKFKEGHLLS 196 (424)
Q Consensus 124 h~~~v~~i~~~p~-~~~~latg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~-~-----~h~~~v~~l~~~~~~~~~l~s 196 (424)
+...+.++++.++ +. ++++.. .+.|.+|+... . ...+ . .....+.++++.+++. ++++
T Consensus 69 ~~~~~~~i~~~~~~g~-l~v~~~-~~~l~~~d~~g-~-----------~~~~~~~~~~~~~~~~~~~i~~d~~g~-l~v~ 133 (314)
T 1pjx_A 69 YGGIPAGCQCDRDANQ-LFVADM-RLGLLVVQTDG-T-----------FEEIAKKDSEGRRMQGCNDCAFDYEGN-LWIT 133 (314)
T ss_dssp EECCEEEEEECSSSSE-EEEEET-TTEEEEEETTS-C-----------EEECCSBCTTSCBCBCCCEEEECTTSC-EEEE
T ss_pred CCCCCceEEEecCCCc-EEEEEC-CCCEEEEeCCC-C-----------EEEEEeccCCCccccCCcCEEECCCCC-EEEE
Confidence 4467889999998 54 555443 44788898762 1 1111 1 1123578999999886 5555
Q ss_pred EeCC---------------CcEEEEeCCCCCCCCcccceeeeecCCcceeeEEee----CCCCcEEEEEeCCCeEEEEEC
Q 014472 197 GSDD---------------AQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWH----LRHEYLFGSVGDDQYLLIWDL 257 (424)
Q Consensus 197 ~~~d---------------g~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~i~~~----~~~~~~~~s~~~dg~i~i~d~ 257 (424)
...+ +.|..|+.. +. ...+..+......++|+ |+++.++++...++.|.+||+
T Consensus 134 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~-------~~~~~~~~~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~ 205 (314)
T 1pjx_A 134 APAGEVAPADYTRSMQEKFGSIYCFTTD-GQ-------MIQVDTAFQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDI 205 (314)
T ss_dssp ECBCBCTTSCCCBTTSSSCEEEEEECTT-SC-------EEEEEEEESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEE
T ss_pred ecCcccccccccccccCCCCeEEEECCC-CC-------EEEeccCCCCcceEEEecccCCCCCEEEEEECCCCeEEEEEC
Confidence 5444 466667654 21 11122233456889999 998777767677899999998
Q ss_pred C-CCCCC--CCeeEecccC-CCeeEEEecCCCCeEEEEEeCCCcEEEEECCCCCCcceeecCCCCCEEEEEEcCCCCcEE
Q 014472 258 R-TPSVS--KPVQSVVAHQ-SEVNCLAFNPFNEWILATGSTDKTVKLFDLRKISTALHTFDSHKEEVFQVGWNPKNETIL 333 (424)
Q Consensus 258 ~-~~~~~--~~~~~~~~~~-~~v~~i~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l 333 (424)
. .+... .....+..+. ..+..++++++|. ++++...++.|.+||..+ +..+..+..+...+.+++|+|++..++
T Consensus 206 ~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~~G~-l~v~~~~~~~i~~~d~~~-g~~~~~~~~~~~~~~~i~~~~dg~~l~ 283 (314)
T 1pjx_A 206 KGPAKIENKKVWGHIPGTHEGGADGMDFDEDNN-LLVANWGSSHIEVFGPDG-GQPKMRIRCPFEKPSNLHFKPQTKTIF 283 (314)
T ss_dssp EETTEEEEEEEEEECCCCSSCEEEEEEEBTTCC-EEEEEETTTEEEEECTTC-BSCSEEEECSSSCEEEEEECTTSSEEE
T ss_pred CCCCccccceEEEECCCCCCCCCCceEECCCCC-EEEEEcCCCEEEEEcCCC-CcEeEEEeCCCCCceeEEECCCCCEEE
Confidence 6 22210 0112222333 5678899999886 677766788999999885 455666666668899999999996566
Q ss_pred EEEeCCCeEEEeeCCCC
Q 014472 334 ASCCLGRRLMVWDLSRI 350 (424)
Q Consensus 334 ~s~~~dg~i~iwd~~~~ 350 (424)
++...++.|..|++...
T Consensus 284 v~~~~~~~l~~~~~~~~ 300 (314)
T 1pjx_A 284 VTEHENNAVWKFEWQRN 300 (314)
T ss_dssp EEETTTTEEEEEECSSC
T ss_pred EEeCCCCeEEEEeCCCC
Confidence 66667788999998753
No 214
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.21 E-value=1.4e-09 Score=109.62 Aligned_cols=203 Identities=11% Similarity=0.075 Sum_probs=124.6
Q ss_pred CCCCeeeEEecCCCCceEEEEeC-CC----cEEEEeCCCCCCCCcccceeeeecCCcceeeEEeeCCCCcEEEEEeCCC-
Q 014472 177 HSTEGYGLSWSKFKEGHLLSGSD-DA----QICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQ- 250 (424)
Q Consensus 177 h~~~v~~l~~~~~~~~~l~s~~~-dg----~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~~s~~~dg- 250 (424)
|...+.+++|+|+|+ +|+.++. +| .|++||+.++.. +.. ..+...+..++|+|+ +.++.+ +.++
T Consensus 161 ~~~~~~~~~~SPDG~-~la~~~~~~G~e~~~i~v~dl~tg~~------~~~-~~~~~~~~~~~wspD-~~l~~~-~~~~~ 230 (741)
T 1yr2_A 161 GATALDAWAASDDGR-LLAYSVQDGGSDWRTVKFVGVADGKP------LAD-ELKWVKFSGLAWLGN-DALLYS-RFAEP 230 (741)
T ss_dssp --EEEEEEEECTTSS-EEEEEEEETTCSEEEEEEEETTTCCE------EEE-EEEEEESCCCEESTT-SEEEEE-ECCCC
T ss_pred CCEEEEeEEECCCCC-EEEEEEcCCCCceEEEEEEECCCCCC------CCc-cCCCceeccEEEECC-CEEEEE-EecCc
Confidence 334678999999998 4555443 34 599999988742 111 112223468899999 766644 4443
Q ss_pred -------------eEEEEECCCCCCCCCeeEec--ccCCCeeEEEecCCCCeEEEEEeC----CCcEEEEECCCCCCc-c
Q 014472 251 -------------YLLIWDLRTPSVSKPVQSVV--AHQSEVNCLAFNPFNEWILATGST----DKTVKLFDLRKISTA-L 310 (424)
Q Consensus 251 -------------~i~i~d~~~~~~~~~~~~~~--~~~~~v~~i~~~~~~~~~l~~g~~----dg~i~iwd~~~~~~~-~ 310 (424)
.|++|++.++.. .....+. .+...+..+.|+|+|+++++++.. ...|.+||+.+.... .
T Consensus 231 ~~~~~~~~~~~~~~v~~~~lgt~~~-~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~ 309 (741)
T 1yr2_A 231 KEGQAFQALNYNQTVWLHRLGTPQS-ADQPVFATPELPKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPV 309 (741)
T ss_dssp --------CCCCCEEEEEETTSCGG-GCEEEECCTTCTTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCC
T ss_pred ccccccccCCCCCEEEEEECCCCch-hCEEEeccCCCCeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCCccc
Confidence 388999876542 1122222 233458899999999965555432 348999999863112 4
Q ss_pred eeecCCCCCEEEEEEcCCCCcEEEEEeC---CCeEEEeeCCCCCcccCCCccCCCCCeeeEEEcCCCCCcceEEeCCCCC
Q 014472 311 HTFDSHKEEVFQVGWNPKNETILASCCL---GRRLMVWDLSRIDEEQTPEDAEDGPPELLFIHGGHTSKISDFSWNPCED 387 (424)
Q Consensus 311 ~~~~~~~~~v~~~~~sp~~~~~l~s~~~---dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~ 387 (424)
..+..+...+.... +|+++.+++.... ++.|.+||+.... .........+...+.+++|. +.
T Consensus 310 ~~l~~~~~~~~~~~-~~dg~~l~~~s~~~~~~~~l~~~d~~~~~------------~~~~~l~~~~~~~l~~~~~~--~~ 374 (741)
T 1yr2_A 310 TALIPDLKAQWDFV-DGVGDQLWFVSGDGAPLKKIVRVDLSGST------------PRFDTVVPESKDNLESVGIA--GN 374 (741)
T ss_dssp EEEECSSSSCEEEE-EEETTEEEEEECTTCTTCEEEEEECSSSS------------CEEEEEECCCSSEEEEEEEE--BT
T ss_pred EEecCCCCceEEEE-eccCCEEEEEECCCCCCCEEEEEeCCCCc------------cccEEEecCCCCeEEEEEEE--CC
Confidence 55555555555554 4888754444432 3459999987531 02222234444556677777 34
Q ss_pred cEEEEEeCCCcEEEEecC
Q 014472 388 WVISSVAEDNILQIWQMA 405 (424)
Q Consensus 388 ~~l~s~~~d~~i~iw~~~ 405 (424)
.++++...|+..+||.+.
T Consensus 375 ~lv~~~~~dg~~~l~~~~ 392 (741)
T 1yr2_A 375 RLFASYIHDAKSQVLAFD 392 (741)
T ss_dssp EEEEEEEETTEEEEEEEE
T ss_pred EEEEEEEECCEEEEEEEe
Confidence 488898999988887664
No 215
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.19 E-value=6.9e-09 Score=95.99 Aligned_cols=256 Identities=12% Similarity=0.024 Sum_probs=155.7
Q ss_pred EEEEEeccCCceeEEEecCCCCcEEEEEe---------cCCeEEEEeCCCCCCCCCCCCCCCCcEEEecC-------CCC
Q 014472 117 QIIQQINHDGEVNRARYMPQNPFLIATKT---------VSAEVYVFDYSKHPSKPPLDGACSPDLRLRGH-------STE 180 (424)
Q Consensus 117 ~~~~~~~h~~~v~~i~~~p~~~~~latg~---------~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~h-------~~~ 180 (424)
+++.++.-...- .++++|+++.++++.. .++.|.++|..+ .+....+.-- ...
T Consensus 110 ~vv~~I~vG~~P-gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t----------~~vv~~I~v~g~~r~~~g~~ 178 (426)
T 3c75_H 110 RILGMTDGGFLP-HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVT----------FLPIADIELPDAPRFLVGTY 178 (426)
T ss_dssp EEEEEEEECSSC-EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTT----------CCEEEEEEETTCCCCCBSCC
T ss_pred EEEEEEECCCCC-ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCC----------CcEEEEEECCCccccccCCC
Confidence 344455443334 8999999986666542 467899999987 3444444311 234
Q ss_pred eeeEEecCCCCceEEEEeC--CCcEEEEeCCCCCCCCcccceeeeecCCcceeeEEeeCCCCcEEEEEeCCCeEEEEECC
Q 014472 181 GYGLSWSKFKEGHLLSGSD--DAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLR 258 (424)
Q Consensus 181 v~~l~~~~~~~~~l~s~~~--dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~~s~~~dg~i~i~d~~ 258 (424)
...+.++|++. +|+++.. ++.|.+.|+.+.+. +..+..- + +....|.+...+++.+.||.+.+.++.
T Consensus 179 P~~~~~spDGk-~lyV~n~~~~~~VsVID~~t~kv------v~~I~v~-g---~~~~~p~g~~~~v~~~~dG~~~~V~~~ 247 (426)
T 3c75_H 179 QWMNALTPDNK-NLLFYQFSPAPAVGVVDLEGKTF------DRMLDVP-D---CYHIFPASPTVFYMNCRDGSLARVDFA 247 (426)
T ss_dssp GGGSEECTTSS-EEEEEECSSSCEEEEEETTTTEE------EEEEECC-S---EEEEEEEETTEEEEEETTSSEEEEECC
T ss_pred cceEEEcCCCC-EEEEEecCCCCeEEEEECCCCeE------EEEEEcC-C---ceeeccCCCcEEEEEcCCCCEEEEECC
Confidence 67899999998 5666553 68899999987632 2222211 1 133455565677788889998888885
Q ss_pred CCCCCCCe-eEecccCCCe-eEEEecCCCCeEEEEEeCCCcEEEEECCCCCC-cceeecC----------CCCCEEEEEE
Q 014472 259 TPSVSKPV-QSVVAHQSEV-NCLAFNPFNEWILATGSTDKTVKLFDLRKIST-ALHTFDS----------HKEEVFQVGW 325 (424)
Q Consensus 259 ~~~~~~~~-~~~~~~~~~v-~~i~~~~~~~~~l~~g~~dg~i~iwd~~~~~~-~~~~~~~----------~~~~v~~~~~ 325 (424)
.++..... ..+.....++ ..+.+.+++..+++ ....+.+.+.|+..... .+..+.. .......+++
T Consensus 248 ~~~v~~~~~~~~~v~~~p~~~~~~~~~dg~~~~~-~s~~g~V~ViD~~~~~~~v~~~~~~~~~~~i~~g~~p~g~~~va~ 326 (426)
T 3c75_H 248 DGETKVTNTEVFHTEDELLINHPAFSLRSGRLVW-PTYTGKIFQADLTAEGATFRAPIEALTEAERADDWRPGGWQQTAY 326 (426)
T ss_dssp TTCCEEEECCCCSCTTSCBCSCCEECTTTCEEEE-EBTTSEEEEEEECSSCEEECCCEESSCTTTGGGTEEECSSSCEEE
T ss_pred CCcEEEEeeeeeccCCCceeeEeeecCCCCEEEE-EeCCCcEEEEeccCCceEEeeeeeeccccccccccccCCceeeEE
Confidence 44321000 0111111221 23567888886444 45688999999865221 1111100 0112223689
Q ss_pred cCCCCcEEEEEeC---------CCeEEEeeCCCCCcccCCCccCCCCCeeeEEEcCCCCCcceEEeCCCCCcEEEEEe-C
Q 014472 326 NPKNETILASCCL---------GRRLMVWDLSRIDEEQTPEDAEDGPPELLFIHGGHTSKISDFSWNPCEDWVISSVA-E 395 (424)
Q Consensus 326 sp~~~~~l~s~~~---------dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~-~ 395 (424)
+|++..++++... ++.|.++|+.+.+ .+..+... ....++.|+|+++.+++++. .
T Consensus 327 s~dg~rlyVa~~~~~~gthk~~s~~VsVID~~T~k--------------vv~~I~vg-~~P~gia~spDg~~~lyv~n~~ 391 (426)
T 3c75_H 327 HRQSDRIYLLVDQRDEWKHKAASRFVVVLNAETGE--------------RINKIELG-HEIDSINVSQDAEPLLYALSAG 391 (426)
T ss_dssp EGGGTEEEEEEEECCTTCTTSCEEEEEEEETTTCC--------------EEEEEEEE-EEECEEEECCSSSCEEEEEETT
T ss_pred cCCCCEEEEEecccccccccCCCCEEEEEECCCCe--------------EEEEEECC-CCcCeEEEccCCCEEEEEEcCC
Confidence 9998766665432 3579999998864 23332211 14789999999983455555 6
Q ss_pred CCcEEEEecCCCCCC
Q 014472 396 DNILQIWQMAENIYH 410 (424)
Q Consensus 396 d~~i~iw~~~~~~~~ 410 (424)
++.|.|+|+.+....
T Consensus 392 s~~VsVID~~t~kvv 406 (426)
T 3c75_H 392 TQTLHIYDAATGEEL 406 (426)
T ss_dssp TTEEEEEETTTCCEE
T ss_pred CCeEEEEECCCCCEE
Confidence 999999999988654
No 216
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=99.17 E-value=2.7e-09 Score=106.57 Aligned_cols=207 Identities=14% Similarity=0.120 Sum_probs=132.5
Q ss_pred CCCCeeeEEecCCCCceEEEEeC----CCcEEEEeCCCCCCCCcccceeeeecCCcceeeEEeeCCCCcEEEEEeCC---
Q 014472 177 HSTEGYGLSWSKFKEGHLLSGSD----DAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDD--- 249 (424)
Q Consensus 177 h~~~v~~l~~~~~~~~~l~s~~~----dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~~s~~~d--- 249 (424)
|...+.+++|+|+++.++++.+. ...|++||+.++.. +.. .........++|+ +++.++. ++.+
T Consensus 127 ~~~~l~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~------~~~-~~~~~k~~~~~Ws-Dg~~l~y-~~~~~~~ 197 (693)
T 3iuj_A 127 GTTALDQLSFSRDGRILAYSLSLAGSDWREIHLMDVESKQP------LET-PLKDVKFSGISWL-GNEGFFY-SSYDKPD 197 (693)
T ss_dssp SCCEEEEEEECTTSSEEEEEEECSSCCEEEEEEEETTTCSE------EEE-EEEEEESCCCEEE-TTTEEEE-EESSCCC
T ss_pred CcEEEEEEEECCCCCEEEEEEecCCCceEEEEEEECCCCCC------Ccc-ccCCceeccEEEe-CCCEEEE-EEecCcc
Confidence 44568889999999843333333 35699999988742 111 1111123578999 9987764 4444
Q ss_pred ----------CeEEEEECCCCCCC-CCeeEecc-cCCCeeEEEecCCCCeEEEEEeCC---CcEEEEECCCCCCcceeec
Q 014472 250 ----------QYLLIWDLRTPSVS-KPVQSVVA-HQSEVNCLAFNPFNEWILATGSTD---KTVKLFDLRKISTALHTFD 314 (424)
Q Consensus 250 ----------g~i~i~d~~~~~~~-~~~~~~~~-~~~~v~~i~~~~~~~~~l~~g~~d---g~i~iwd~~~~~~~~~~~~ 314 (424)
..|++|++.++... ..+..... |......+.|+|++++++++.+.+ ..|+++|+.........+.
T Consensus 198 ~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~~l~ 277 (693)
T 3iuj_A 198 GSELSARTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENAPLLTVQ 277 (693)
T ss_dssp -------CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTCCCEEEE
T ss_pred cccccccCCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCCceEEEe
Confidence 34999998875421 11222223 455678899999999876666533 5899999987444556666
Q ss_pred CCCCCEEEEEEcCCCCcEEEEEeCC---CeEEEeeCCCCCcccCCCccCCCCCeeeEEEcCCCCCcceEEeCCCCCcEEE
Q 014472 315 SHKEEVFQVGWNPKNETILASCCLG---RRLMVWDLSRIDEEQTPEDAEDGPPELLFIHGGHTSKISDFSWNPCEDWVIS 391 (424)
Q Consensus 315 ~~~~~v~~~~~sp~~~~~l~s~~~d---g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~ 391 (424)
.+....... |++++..+++.+..+ +.|..+++...... ....+..|...+. .|++++.++++
T Consensus 278 ~~~~~~~~~-~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~------------~~~~l~~~~~~~~--~~s~~g~~lv~ 342 (693)
T 3iuj_A 278 GDLDADVSL-VDNKGSTLYLLTNRDAPNRRLVTVDAANPGPA------------HWRDLIPERQQVL--TVHSGSGYLFA 342 (693)
T ss_dssp CSSSSCEEE-EEEETTEEEEEECTTCTTCEEEEEETTSCCGG------------GCEEEECCCSSCE--EEEEETTEEEE
T ss_pred CCCCceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCCcc------------ccEEEecCCCCEE--EEEEECCEEEE
Confidence 666666555 667776677666654 57889998764321 1122334444444 88999987666
Q ss_pred EEeCCC--cEEEEecCCC
Q 014472 392 SVAEDN--ILQIWQMAEN 407 (424)
Q Consensus 392 s~~~d~--~i~iw~~~~~ 407 (424)
+...++ .|++|++..+
T Consensus 343 ~~~~~g~~~l~~~d~~g~ 360 (693)
T 3iuj_A 343 EYMVDATARVEQFDYEGK 360 (693)
T ss_dssp EEEETTEEEEEEECTTSC
T ss_pred EEEECCeeEEEEEECCCC
Confidence 666665 6888888755
No 217
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.16 E-value=8.1e-08 Score=88.05 Aligned_cols=205 Identities=12% Similarity=-0.029 Sum_probs=127.5
Q ss_pred ceeEEEecCCCCcEEEEEec-CCeEEEEeCCCCCCCCCCCCCCCCcEE-EecCCCCeeeEEecCCCCceEEEEeCCCcEE
Q 014472 127 EVNRARYMPQNPFLIATKTV-SAEVYVFDYSKHPSKPPLDGACSPDLR-LRGHSTEGYGLSWSKFKEGHLLSGSDDAQIC 204 (424)
Q Consensus 127 ~v~~i~~~p~~~~~latg~~-dg~v~iwd~~~~~~~~~~~~~~~~~~~-~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~ 204 (424)
....++|+|+++.++++... ++.|.++| .+ .+.... +. ... ++.+.|.+...+++.+.||.+.
T Consensus 126 ~p~~~~~spDG~~l~v~n~~~~~~v~viD-~t----------~~~~~~~i~-~~~---~~~~~~~~~~~~~~~~~dg~~~ 190 (373)
T 2mad_H 126 YSWMNANTPNNADLLFFQFAAGPAVGLVV-QG----------GSSDDQLLS-SPT---CYHIHPGAPSTFYLLCAQGGLA 190 (373)
T ss_pred CccceEECCCCCEEEEEecCCCCeEEEEE-CC----------CCEEeEEcC-CCc---eEEEEeCCCceEEEEcCCCCEE
Confidence 35579999999855555433 57899999 76 232333 22 111 2455666666778888999999
Q ss_pred EEeCCCCCCCCcccceeeeecCCcc-eeeEEeeCCCCcEEEEEeCCCeEEEEECCCCCCCCCeeEecc----------cC
Q 014472 205 LWDINAAPKNKSLEAMQIFKVHEGV-VEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVA----------HQ 273 (424)
Q Consensus 205 vwd~~~~~~~~~~~~~~~~~~~~~~-v~~i~~~~~~~~~~~s~~~dg~i~i~d~~~~~~~~~~~~~~~----------~~ 273 (424)
++|. ++...........+ ....+ .....+.+++..++.+ +..+.+.+.|+..... ..+..+.. ..
T Consensus 191 ~vd~-~g~~~~~~~~~~~~-~~~~p~~~~~~~~~~~~~~~~~-~~~~~v~vid~~~~~~-~v~~~~~~~~~~~~~~~~~p 266 (373)
T 2mad_H 191 KTDH-AGGAAGAGLVGAML-TAAQNLLTQPAQANKSGRIVWP-VYSGKILQADISAAGA-TNKAPIDALSGGRKADTWRP 266 (373)
T ss_pred EEEC-CCcEEEEEeccccc-cCCcceeecceeEecCCEEEEE-cCCceEEEEeccCCcc-eEeeeeeecCCcccccceec
Confidence 9999 65322110000001 11122 1234566666555434 3678999999975431 11111110 12
Q ss_pred CCeeEEEecCCCCeEEEEEe---------CCCcEEEEECCCCCCcceeecCCCCCEEEEEEcCCCCcEEEEEe-CCCeEE
Q 014472 274 SEVNCLAFNPFNEWILATGS---------TDKTVKLFDLRKISTALHTFDSHKEEVFQVGWNPKNETILASCC-LGRRLM 343 (424)
Q Consensus 274 ~~v~~i~~~~~~~~~l~~g~---------~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~s~~-~dg~i~ 343 (424)
.....++++|+++.++++.. ..+.|.++|+.+ .+.+..+.. .....+++|+|+++.+++++. .++.|.
T Consensus 267 ~g~~~~~~s~d~~~lyV~~~~~~~~~~~~~~~~V~VID~~t-~~vv~~i~~-g~~p~~i~~s~Dg~~~l~v~~~~~~~V~ 344 (373)
T 2mad_H 267 GGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGLV-GQTSSQISL-GHDVDAISVAQDGGPDLYALSAGTEVLH 344 (373)
T ss_pred CceEeEEECCCCCEEEEEeccCCcccccCCCCeEEEEECCC-CEEEEEEEC-CCCcCeEEECCCCCeEEEEEcCCCCeEE
Confidence 33445789999886555443 235799999988 677777754 446899999999974566666 589999
Q ss_pred EeeCCCCCc
Q 014472 344 VWDLSRIDE 352 (424)
Q Consensus 344 iwd~~~~~~ 352 (424)
++|+.+++.
T Consensus 345 ViD~~t~~v 353 (373)
T 2mad_H 345 IYDAGAGDQ 353 (373)
T ss_pred EEECCCCCE
Confidence 999988653
No 218
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=99.14 E-value=4.9e-08 Score=89.43 Aligned_cols=229 Identities=15% Similarity=0.116 Sum_probs=142.4
Q ss_pred CCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEe------c-CCCCeeeEEecCCCCceEEEEeCC------C
Q 014472 135 PQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLR------G-HSTEGYGLSWSKFKEGHLLSGSDD------A 201 (424)
Q Consensus 135 p~~~~~latg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~------~-h~~~v~~l~~~~~~~~~l~s~~~d------g 201 (424)
++++.+++.|..++.|+|+|+.+.+..+ +....+. . .......+...|++ +++++..+ |
T Consensus 93 ~~r~~l~v~~l~s~~I~viD~~t~p~~p------~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG--i~Vs~~g~~~g~~~g 164 (462)
T 2ece_A 93 IERRFLIVPGLRSSRIYIIDTKPNPREP------KIIKVIEPEEVKKVSGYSRLHTVHCGPDA--IYISALGNEEGEGPG 164 (462)
T ss_dssp CCSCEEEEEBTTTCCEEEEECCSCTTSC------EEEEEECHHHHHHHHCEEEEEEEEECSSC--EEEEEEEETTSCSCC
T ss_pred ccCCEEEEccCCCCeEEEEECCCCCCCc------eeeeeechhhcccccCCCcccceeECCCe--EEEEcCCCcCCCCCC
Confidence 7888899999999999999997633222 2222331 0 11134566778877 56666555 7
Q ss_pred cEEEEeCCCCCCCCcccceeeeec--CC-cceeeEEeeCCCCcEEEEEe-------------------CCCeEEEEECCC
Q 014472 202 QICLWDINAAPKNKSLEAMQIFKV--HE-GVVEDVAWHLRHEYLFGSVG-------------------DDQYLLIWDLRT 259 (424)
Q Consensus 202 ~i~vwd~~~~~~~~~~~~~~~~~~--~~-~~v~~i~~~~~~~~~~~s~~-------------------~dg~i~i~d~~~ 259 (424)
.|.++|..+.+. +..+.. .. .--.++.|+|+++.++ +.. .+.+|.+||+.+
T Consensus 165 ~v~vlD~~T~~v------~~~~~~~~~~~~~~Yd~~~~p~~~~mv-sS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~ 237 (462)
T 2ece_A 165 GILMLDHYSFEP------LGKWEIDRGDQYLAYDFWWNLPNEVLV-SSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRK 237 (462)
T ss_dssp EEEEECTTTCCE------EEECCSBCTTCCCCCCEEEETTTTEEE-ECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTT
T ss_pred eEEEEECCCCeE------EEEEccCCCCccccceEEECCCCCEEE-EccCcCccccccccchhhhhhccCCEEEEEECCC
Confidence 899999987643 233321 11 2245688999998554 442 378999999987
Q ss_pred CCCCCCeeEeccc--CCCeeEEEe--cCCCCeEEEEEe-----CCCcEEEEECCCCCC--cceee--cC-----------
Q 014472 260 PSVSKPVQSVVAH--QSEVNCLAF--NPFNEWILATGS-----TDKTVKLFDLRKIST--ALHTF--DS----------- 315 (424)
Q Consensus 260 ~~~~~~~~~~~~~--~~~v~~i~~--~~~~~~~l~~g~-----~dg~i~iwd~~~~~~--~~~~~--~~----------- 315 (424)
++. +.++... ......|.| +|++++.++++- .+++|.+|.... +. ..+.+ ..
T Consensus 238 ~k~---~~tI~vg~~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~-g~~~~~~vIdi~~~~v~~~lp~~~ 313 (462)
T 2ece_A 238 RKR---IHSLTLGEENRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYED-GKWNAEKVIEIPAEPLEGNLPEIL 313 (462)
T ss_dssp TEE---EEEEESCTTEEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEET-TEEEEEEEEEECCEECCSSCCGGG
T ss_pred CcE---eeEEecCCCCCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecC-CceeEEEEEeCCCccccccccccc
Confidence 542 4444331 123444544 999997776666 778887765543 21 00110 00
Q ss_pred -----CCCCEEEEEEcCCCCcEEEEEeCCCeEEEeeCCCCCcccCCCccCCCCCeeeEEEc-C-C------------CCC
Q 014472 316 -----HKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPEDAEDGPPELLFIHG-G-H------------TSK 376 (424)
Q Consensus 316 -----~~~~v~~~~~sp~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~-~-h------------~~~ 376 (424)
-......+.+||+++.++++.-..+.|.+||+..... .+++.... + . ...
T Consensus 314 ~~f~~~~~~pa~I~lS~DGrfLYVSnrg~d~VavfdV~d~~~-----------~~lv~~I~tGG~~~~~~~~~G~~~~gg 382 (462)
T 2ece_A 314 KPFKAVPPLVTDIDISLDDKFLYLSLWGIGEVRQYDISNPFK-----------PVLTGKVKLGGIFHRADHPAGHKLTGA 382 (462)
T ss_dssp GGGTEECCCCCCEEECTTSCEEEEEETTTTEEEEEECSSTTS-----------CEEEEEEECBTTTTCBCCTTSCCCCSC
T ss_pred cccccCCCceeEEEECCCCCEEEEEeCCCCEEEEEEecCCCC-----------cEEEEEEEeCCeeccccccccccCCCC
Confidence 0245788999999987777777789999999964321 13332221 1 0 013
Q ss_pred cceEEeCCCCCcEEEEE
Q 014472 377 ISDFSWNPCEDWVISSV 393 (424)
Q Consensus 377 v~~~~~~~~~~~~l~s~ 393 (424)
...++++|+|++++++.
T Consensus 383 Pr~~~lSpDGk~LyVaN 399 (462)
T 2ece_A 383 PQMLEISRDGRRVYVTN 399 (462)
T ss_dssp CCCEEECTTSSEEEEEC
T ss_pred CCEEEEcCCCCEEEEEc
Confidence 58899999999766554
No 219
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=99.12 E-value=3.7e-09 Score=96.18 Aligned_cols=233 Identities=8% Similarity=-0.105 Sum_probs=136.2
Q ss_pred EEEEEecCC----eEEEEeCCCCCCCCCCCCCCCCcEEEecCCCCeeeEEecCCCCceEEEEe----------CCCcEEE
Q 014472 140 LIATKTVSA----EVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGS----------DDAQICL 205 (424)
Q Consensus 140 ~latg~~dg----~v~iwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~----------~dg~i~v 205 (424)
++++-..++ .|.++|..+ .+.+.++.....+ .+.++|++.. ++++. .++.|.+
T Consensus 34 ~yV~~~~~~~~~d~vsvID~~t----------~~v~~~i~vG~~P--~i~~spDg~~-lyVan~~~~r~~~G~~~~~Vsv 100 (368)
T 1mda_H 34 SHITLPAYFAGTTENWVSCAGC----------GVTLGHSLGAFLS--LAVAGHSGSD-FALASTSFARSAKGKRTDYVEV 100 (368)
T ss_dssp EEEEECTTTCSSEEEEEEETTT----------TEEEEEEEECTTC--EEEECTTSSC-EEEEEEEETTTTSSSEEEEEEE
T ss_pred EEEECCccCCccceEEEEECCC----------CeEEEEEeCCCCC--ceEECCCCCE-EEEEcccccccccCCCCCEEEE
Confidence 455544444 888999887 4555666544444 7999999985 55554 3788999
Q ss_pred EeCCCCCCCCcccceeeeecC-------CcceeeEEeeCCCCcEEEEEeC-CCeEEE--EECCCCCCCCCeeE------e
Q 014472 206 WDINAAPKNKSLEAMQIFKVH-------EGVVEDVAWHLRHEYLFGSVGD-DQYLLI--WDLRTPSVSKPVQS------V 269 (424)
Q Consensus 206 wd~~~~~~~~~~~~~~~~~~~-------~~~v~~i~~~~~~~~~~~s~~~-dg~i~i--~d~~~~~~~~~~~~------~ 269 (424)
||+.+.+. +..+... ......++++|++++++++... +..+.+ +|+.+- ..+.. .
T Consensus 101 iD~~T~~v------v~~I~v~~~~~~~~g~~P~~ia~SpDGk~lyVan~~~~~~v~V~~iD~~tv---~~i~v~~~~~~~ 171 (368)
T 1mda_H 101 FDPVTFLP------IADIELPDAPRFSVGPRVHIIGNCASSACLLFFLFGSSAAAGLSVPGASDD---QLTKSASCFHIH 171 (368)
T ss_dssp ECTTTCCE------EEEEEETTSCSCCBSCCTTSEEECTTSSCEEEEECSSSCEEEEEETTTEEE---EEEECSSCCCCE
T ss_pred EECCCCCE------EEEEECCCccccccCCCcceEEEcCCCCEEEEEccCCCCeEEEEEEchhhc---eEEECCCceEEc
Confidence 99988743 2333221 1346789999999988866533 467888 888650 00100 0
Q ss_pred cc---------cCCCeeEEEe--------------------------cCCCCeEEEEEeCCCcEEEEECCCCC-Ccceee
Q 014472 270 VA---------HQSEVNCLAF--------------------------NPFNEWILATGSTDKTVKLFDLRKIS-TALHTF 313 (424)
Q Consensus 270 ~~---------~~~~v~~i~~--------------------------~~~~~~~l~~g~~dg~i~iwd~~~~~-~~~~~~ 313 (424)
.. ..+.+..+.. .+++..++ ..+. +.+.+.|+.... ..+..+
T Consensus 172 p~g~~~~~~~~~dg~~~~vd~~~~~~~~~~v~~~~t~~i~vg~~P~~~~~~~~~~-~vs~-~~V~viD~~~~~~~v~~~~ 249 (368)
T 1mda_H 172 PGAAATHYLGSCPASLAASDLAAAPAAAGIVGAQCTGAQNCSSQAAQANYPGMLV-WAVA-SSILQGDIPAAGATMKAAI 249 (368)
T ss_dssp EEETTEEECCCCTTSCEEEECCSSCCCCEECCCCSCTTSCBCSCCEEETTTTEEE-ECBS-SCCEEEECCSSCCEEECCC
T ss_pred cCCCeEEEEEcCCCCEEEEECccccccCCeEEEEeeeeeeCCCCccccccCCEEE-EEcC-CEEEEEECCCCcceEEEEE
Confidence 00 0001111111 22233222 2223 667777765311 111111
Q ss_pred cC-------C---CCCEEEEEEcCCCCcEEEEEe---C-----CCeEEEeeCCCCCcccCCCccCCCCCeeeEEEcCCCC
Q 014472 314 DS-------H---KEEVFQVGWNPKNETILASCC---L-----GRRLMVWDLSRIDEEQTPEDAEDGPPELLFIHGGHTS 375 (424)
Q Consensus 314 ~~-------~---~~~v~~~~~sp~~~~~l~s~~---~-----dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~ 375 (424)
.. + ......++++|+++.++++.. . ++.+.++|+.+.+.. ..+....
T Consensus 250 ~~~~~~~~~~~~~p~g~~~v~~s~dg~~lyV~~~~~~~~~~~~~~~~~ViD~~t~~vv--------------~~i~vg~- 314 (368)
T 1mda_H 250 DGNESGRKADNFRSAGFQMVAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASVGQTS--------------GPISNGH- 314 (368)
T ss_dssp CSSCTHHHHTTEEECSSSCEEEETTTTEEEEEEEECSSCTTSCEEEEEEEESSSCCEE--------------ECCEEEE-
T ss_pred EeccccccccccccCcceeeEEcCCCCEEEEEeccccCcccccCCCEEEEECCCCeEE--------------EEEECCC-
Confidence 11 0 011122789999987665544 2 235669999886432 2221111
Q ss_pred CcceEEeCCCCCcEEEEEe-CCCcEEEEecCCCCCCC
Q 014472 376 KISDFSWNPCEDWVISSVA-EDNILQIWQMAENIYHD 411 (424)
Q Consensus 376 ~v~~~~~~~~~~~~l~s~~-~d~~i~iw~~~~~~~~~ 411 (424)
....++|+|++++++++.. .++.|.++|+.+.....
T Consensus 315 ~p~gi~~s~Dg~~l~va~~~~~~~VsVID~~t~kvv~ 351 (368)
T 1mda_H 315 DSDAIIAAQDGASDNYANSAGTEVLDIYDAASDQDQS 351 (368)
T ss_dssp EECEEEECCSSSCEEEEEETTTTEEEEEESSSCEEEE
T ss_pred CcceEEECCCCCEEEEEccCCCCeEEEEECCCCcEEE
Confidence 4789999999987788887 69999999999886543
No 220
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.11 E-value=6.3e-08 Score=87.25 Aligned_cols=200 Identities=11% Similarity=0.029 Sum_probs=127.2
Q ss_pred eeeEEecCCCCceEEEEeCCCcEEEEeCCCCCCCCcccceeeeecCCcceeeEEeeCCCCcEEEEEeCCCeEEEEECCCC
Q 014472 181 GYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTP 260 (424)
Q Consensus 181 v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~~s~~~dg~i~i~d~~~~ 260 (424)
..+..|+|++..++++...++.|..||..++.. ..+. ....+.+++|++++. ++++ +.+ .|.+||..++
T Consensus 51 ~egp~~~~~~~~l~~~d~~~~~i~~~d~~~~~~-------~~~~-~~~~v~~i~~~~dg~-l~v~-~~~-gl~~~d~~~g 119 (326)
T 2ghs_A 51 GEGPTFDPASGTAWWFNILERELHELHLASGRK-------TVHA-LPFMGSALAKISDSK-QLIA-SDD-GLFLRDTATG 119 (326)
T ss_dssp EEEEEEETTTTEEEEEEGGGTEEEEEETTTTEE-------EEEE-CSSCEEEEEEEETTE-EEEE-ETT-EEEEEETTTC
T ss_pred CcCCeEeCCCCEEEEEECCCCEEEEEECCCCcE-------EEEE-CCCcceEEEEeCCCe-EEEE-ECC-CEEEEECCCC
Confidence 457889998766777777789999999876521 1122 346789999999986 4433 344 4999998776
Q ss_pred CCCCCeeEecc--cCCCeeEEEecCCCCeEEEEEeC------CCcEEEEECCCCCCcceeecCCCCCEEEEEEcCCCCcE
Q 014472 261 SVSKPVQSVVA--HQSEVNCLAFNPFNEWILATGST------DKTVKLFDLRKISTALHTFDSHKEEVFQVGWNPKNETI 332 (424)
Q Consensus 261 ~~~~~~~~~~~--~~~~v~~i~~~~~~~~~l~~g~~------dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~sp~~~~~ 332 (424)
+. ..+..... ....++.++++|+|. ++++... .+.|..+| . +.. ..+..+......++|+|+++.+
T Consensus 120 ~~-~~~~~~~~~~~~~~~~~i~~d~~G~-l~v~~~~~~~~~~~~~l~~~~--~-g~~-~~~~~~~~~~~~i~~s~dg~~l 193 (326)
T 2ghs_A 120 VL-TLHAELESDLPGNRSNDGRMHPSGA-LWIGTMGRKAETGAGSIYHVA--K-GKV-TKLFADISIPNSICFSPDGTTG 193 (326)
T ss_dssp CE-EEEECSSTTCTTEEEEEEEECTTSC-EEEEEEETTCCTTCEEEEEEE--T-TEE-EEEEEEESSEEEEEECTTSCEE
T ss_pred cE-EEEeeCCCCCCCCCCCCEEECCCCC-EEEEeCCCcCCCCceEEEEEe--C-CcE-EEeeCCCcccCCeEEcCCCCEE
Confidence 52 11111110 123588999999997 4444332 24555555 3 332 2222233457899999999766
Q ss_pred EEEEeCCCeEEEeeCC--CC-CcccCCCccCCCCCeeeEEEcCCCCCcceEEeCCCCCcEEEEEeCCCcEEEEecCCC
Q 014472 333 LASCCLGRRLMVWDLS--RI-DEEQTPEDAEDGPPELLFIHGGHTSKISDFSWNPCEDWVISSVAEDNILQIWQMAEN 407 (424)
Q Consensus 333 l~s~~~dg~i~iwd~~--~~-~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iw~~~~~ 407 (424)
+++.+.++.|.+|++. .+ .. . ....+..+......+..+++.++|. ++++...++.|.+|+....
T Consensus 194 yv~~~~~~~I~~~d~~~~~Gl~~-~--------~~~~~~~~~~~~~~p~gi~~d~~G~-lwva~~~~~~v~~~d~~g~ 261 (326)
T 2ghs_A 194 YFVDTKVNRLMRVPLDARTGLPT-G--------KAEVFIDSTGIKGGMDGSVCDAEGH-IWNARWGEGAVDRYDTDGN 261 (326)
T ss_dssp EEEETTTCEEEEEEBCTTTCCBS-S--------CCEEEEECTTSSSEEEEEEECTTSC-EEEEEETTTEEEEECTTCC
T ss_pred EEEECCCCEEEEEEcccccCCcc-c--------CceEEEECCCCCCCCCeeEECCCCC-EEEEEeCCCEEEEECCCCC
Confidence 6666677899999986 32 11 0 0122333333344567899999998 6766666788999998543
No 221
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=99.09 E-value=6.8e-07 Score=77.89 Aligned_cols=223 Identities=8% Similarity=0.046 Sum_probs=143.7
Q ss_pred ceeEEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCCeeeEEecCCCCceEEEEeCCCcEEEE
Q 014472 127 EVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDDAQICLW 206 (424)
Q Consensus 127 ~v~~i~~~p~~~~~latg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vw 206 (424)
.+..++|.|++..++++-...+.|..++.... .....+........++++.+.+..++++-...+.|.++
T Consensus 37 ~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~----------~~~~~~~~~~~~p~~ia~d~~~~~lyv~d~~~~~I~~~ 106 (267)
T 1npe_A 37 VIIGLAFDCVDKVVYWTDISEPSIGRASLHGG----------EPTTIIRQDLGSPEGIALDHLGRTIFWTDSQLDRIEVA 106 (267)
T ss_dssp EEEEEEEETTTTEEEEEETTTTEEEEEESSSC----------CCEEEECTTCCCEEEEEEETTTTEEEEEETTTTEEEEE
T ss_pred cEEEEEEecCCCEEEEEECCCCEEEEEecCCC----------CcEEEEECCCCCccEEEEEecCCeEEEEECCCCEEEEE
Confidence 56789999977767777777889999998751 11222222234678999998766455555667899999
Q ss_pred eCCCCCCCCcccceeeeecCCcceeeEEeeCCCCcEEEEEeC--CCeEEEEECCCCCCCCCeeEe-cccCCCeeEEEecC
Q 014472 207 DINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGD--DQYLLIWDLRTPSVSKPVQSV-VAHQSEVNCLAFNP 283 (424)
Q Consensus 207 d~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~~s~~~--dg~i~i~d~~~~~~~~~~~~~-~~~~~~v~~i~~~~ 283 (424)
++..... .. ...........++++|++..++++... .+.|..+++.... ...+ ...-.....+++++
T Consensus 107 ~~~g~~~----~~--~~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~~----~~~~~~~~~~~P~gia~d~ 176 (267)
T 1npe_A 107 KMDGTQR----RV--LFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTN----RRILAQDNLGLPNGLTFDA 176 (267)
T ss_dssp ETTSCSC----EE--EECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCC----CEEEECTTCSCEEEEEEET
T ss_pred EcCCCCE----EE--EEECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCCC----cEEEEECCCCCCcEEEEcC
Confidence 9864321 11 111122467899999977777766544 4788888886432 1222 12234678999999
Q ss_pred CCCeEEEEEeCCCcEEEEECCCCCCcceeecCCCCCEEEEEEcCCCCcEEEEEeCCCeEEEeeCCCCCcccCCCccCCCC
Q 014472 284 FNEWILATGSTDKTVKLFDLRKISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPEDAEDGP 363 (424)
Q Consensus 284 ~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~ 363 (424)
++.+++++-...+.|.++|+.. ......+.. ......++.. +..++++....+.|..+|..++
T Consensus 177 ~~~~lyv~d~~~~~I~~~~~~g-~~~~~~~~~-~~~P~gi~~d--~~~lyva~~~~~~v~~~d~~~g------------- 239 (267)
T 1npe_A 177 FSSQLCWVDAGTHRAECLNPAQ-PGRRKVLEG-LQYPFAVTSY--GKNLYYTDWKTNSVIAMDLAIS------------- 239 (267)
T ss_dssp TTTEEEEEETTTTEEEEEETTE-EEEEEEEEC-CCSEEEEEEE--TTEEEEEETTTTEEEEEETTTT-------------
T ss_pred CCCEEEEEECCCCEEEEEecCC-CceEEEecC-CCCceEEEEe--CCEEEEEECCCCeEEEEeCCCC-------------
Confidence 8887777777788999999875 222222222 2344567664 4456666666789999998765
Q ss_pred CeeeEEEcCC-CCCcceEEeCCCCC
Q 014472 364 PELLFIHGGH-TSKISDFSWNPCED 387 (424)
Q Consensus 364 ~~~~~~~~~h-~~~v~~~~~~~~~~ 387 (424)
+.+..+... ......+++.|++.
T Consensus 240 -~~~~~i~~g~~~~p~gi~~~~~~~ 263 (267)
T 1npe_A 240 -KEMDTFHPHKQTRLYGITIALSQC 263 (267)
T ss_dssp -EEEEEECCSSCCCCCCEEEECSCC
T ss_pred -CceEEEccccccccceeeecCccC
Confidence 333343322 22467788887764
No 222
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=99.07 E-value=6.7e-07 Score=77.92 Aligned_cols=229 Identities=7% Similarity=-0.028 Sum_probs=143.0
Q ss_pred CeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCCeeeEEecCCCCceEEEEeCCCcEEEEeCCCCCCCCcccceeeeecCC
Q 014472 148 AEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHE 227 (424)
Q Consensus 148 g~v~iwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~ 227 (424)
+.|+.+++....... ......+......+.+++|.+.+..++++-...+.|..+++..... ........
T Consensus 10 ~~I~~~~~~g~~~~~-----~~~~~~~~~~~~~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~------~~~~~~~~ 78 (267)
T 1npe_A 10 GKIERLPLERNTMKK-----TEAKAFLHIPAKVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEP------TTIIRQDL 78 (267)
T ss_dssp EEEEEEEESSSCBCG-----GGCEEEEEEEEEEEEEEEEETTTTEEEEEETTTTEEEEEESSSCCC------EEEECTTC
T ss_pred CeEEEEEecCccccc-----ccceeeecCCCCcEEEEEEecCCCEEEEEECCCCEEEEEecCCCCc------EEEEECCC
Confidence 578888887621100 0001112212235679999997765555666678999999875421 11111222
Q ss_pred cceeeEEeeCCCCcEEEEEeCCCeEEEEECCCCCCCCCeeEecccCCCeeEEEecCCCCeEEEEEeC--CCcEEEEECCC
Q 014472 228 GVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATGST--DKTVKLFDLRK 305 (424)
Q Consensus 228 ~~v~~i~~~~~~~~~~~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~l~~g~~--dg~i~iwd~~~ 305 (424)
.....+++++++..++++-...+.|.++++..... .............++++|++.+++++... .+.|..+++..
T Consensus 79 ~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~---~~~~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg 155 (267)
T 1npe_A 79 GSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQR---RVLFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDG 155 (267)
T ss_dssp CCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC---EEEECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTS
T ss_pred CCccEEEEEecCCeEEEEECCCCEEEEEEcCCCCE---EEEEECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCC
Confidence 46789999998777887777788999999875331 11122222467899999977765655543 46888888864
Q ss_pred CCCcceee-cCCCCCEEEEEEcCCCCcEEEEEeCCCeEEEeeCCCCCcccCCCccCCCCCeeeEEEcCCCCCcceEEeCC
Q 014472 306 ISTALHTF-DSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPEDAEDGPPELLFIHGGHTSKISDFSWNP 384 (424)
Q Consensus 306 ~~~~~~~~-~~~~~~v~~~~~sp~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~ 384 (424)
.....+ ...-.....++++|++..++++....+.|.++++.... ......+ ......++..
T Consensus 156 --~~~~~~~~~~~~~P~gia~d~~~~~lyv~d~~~~~I~~~~~~g~~--------------~~~~~~~-~~~P~gi~~d- 217 (267)
T 1npe_A 156 --TNRRILAQDNLGLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQPG--------------RRKVLEG-LQYPFAVTSY- 217 (267)
T ss_dssp --CCCEEEECTTCSCEEEEEEETTTTEEEEEETTTTEEEEEETTEEE--------------EEEEEEC-CCSEEEEEEE-
T ss_pred --CCcEEEEECCCCCCcEEEEcCCCCEEEEEECCCCEEEEEecCCCc--------------eEEEecC-CCCceEEEEe-
Confidence 222222 22234678999999877677777778899999987521 1111122 1234566654
Q ss_pred CCCcEEEEEeCCCcEEEEecCCCCC
Q 014472 385 CEDWVISSVAEDNILQIWQMAENIY 409 (424)
Q Consensus 385 ~~~~~l~s~~~d~~i~iw~~~~~~~ 409 (424)
+.+++++....+.|.+++..++..
T Consensus 218 -~~~lyva~~~~~~v~~~d~~~g~~ 241 (267)
T 1npe_A 218 -GKNLYYTDWKTNSVIAMDLAISKE 241 (267)
T ss_dssp -TTEEEEEETTTTEEEEEETTTTEE
T ss_pred -CCEEEEEECCCCeEEEEeCCCCCc
Confidence 454677766778999999987643
No 223
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=99.02 E-value=2.9e-08 Score=94.10 Aligned_cols=249 Identities=10% Similarity=0.116 Sum_probs=156.4
Q ss_pred CCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEec-CCCCeeeEEe-c-CCCCceEEEEe--------------
Q 014472 136 QNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRG-HSTEGYGLSW-S-KFKEGHLLSGS-------------- 198 (424)
Q Consensus 136 ~~~~~latg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~-h~~~v~~l~~-~-~~~~~~l~s~~-------------- 198 (424)
+|+.++++...++.|.+.|+.. .+....+.- ....+..+++ . |++. ++++++
T Consensus 100 DG~~lfVnd~~~~rVavIdl~t----------~~~~~ii~ip~g~~phg~~~~~~p~~~-~v~~~~~~~~p~~~dg~~l~ 168 (595)
T 1fwx_A 100 DGRFLFMNDKANTRVARVRCDV----------MKCDAILEIPNAKGIHGLRPQKWPRSN-YVFCNGEDETPLVNDGTNME 168 (595)
T ss_dssp EEEEEEEEETTTTEEEEEETTT----------TEEEEEEECSSCCSEEEEEECCSSBCS-EEEEEECSCEESSCSSSSTT
T ss_pred CCCEEEEEcCCCCEEEEEECCC----------ceEeeEEeCCCCCCCcceeeeecCCCc-EEEEecccccccCCCCcccc
Confidence 7887788777788999999988 333332221 2345778887 4 7777 566663
Q ss_pred ----CCCcEEEEeCCCCCCCCcccceeeeecCCcceeeEEeeCCCCcEEEEEeCC-------------------------
Q 014472 199 ----DDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDD------------------------- 249 (424)
Q Consensus 199 ----~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~~s~~~d------------------------- 249 (424)
.++.+.+.|..+.+ ....+..- +....++++|+++.+++++...
T Consensus 169 ~~~~~~~~vtvID~~t~~------v~~qI~Vg-g~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~ 241 (595)
T 1fwx_A 169 DVANYVNVFTAVDADKWE------VAWQVLVS-GNLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEI 241 (595)
T ss_dssp CGGGEEEEEEEEETTTTE------EEEEEEES-SCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHH
T ss_pred cccccCceEEEEECCCCe------EEEEEEeC-CCccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccce
Confidence 34678999987642 22222211 2456778899998887665333
Q ss_pred ------------CeEEEEECCCCCCCCCeeEecccCCCeeEEEecCCCCeEEEEEeCCCcEEEEECCCCC----------
Q 014472 250 ------------QYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATGSTDKTVKLFDLRKIS---------- 307 (424)
Q Consensus 250 ------------g~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~l~~g~~dg~i~iwd~~~~~---------- 307 (424)
+.|.|.|.++.+....+..+.. .....++.++|+|+++++++..+.+|.++|+.+..
T Consensus 242 ~~~v~~Gk~~~i~~V~VID~~~~~~~~~~~~Ipv-g~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~ 320 (595)
T 1fwx_A 242 EKAIAAGDYQELNGVKVVDGRKEASSLFTRYIPI-ANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPR 320 (595)
T ss_dssp HHHHHHTCSEEETTEEEEECSGGGCCSSEEEEEE-ESSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGG
T ss_pred eEeccCCCeeEECcEEEEeCcccCCceeEEEEec-CCCceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcc
Confidence 2367777776211011223322 34677899999999988888889999999998631
Q ss_pred -CcceeecCCCCCEEEEEEcCCCCcEEEEEeCCCeEEEeeCCCCCcccCCCccCCCCCeeeEEEcCCCC-----CcceEE
Q 014472 308 -TALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPEDAEDGPPELLFIHGGHTS-----KISDFS 381 (424)
Q Consensus 308 -~~~~~~~~~~~~v~~~~~sp~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~-----~v~~~~ 381 (424)
..+.... -......++|+|+| ...++.-.|+.|.+||+....... .. +...+.+.....|-. .-.++.
T Consensus 321 ~~v~~~v~-vG~gP~h~aF~~dG-~aY~t~~ldsqV~kwdi~~a~~~~--~g--~~~~~vi~kidV~yqpGh~~~~~g~t 394 (595)
T 1fwx_A 321 SAVVAEPE-LGLGPLHTAFDGRG-NAYTSLFLDSQVVKWNIEDAIRAY--AG--EKVDPIKDKLDVHYQPGHLKTVMGET 394 (595)
T ss_dssp GGEEECCB-CCSCEEEEEECTTS-EEEEEETTTTEEEEEEHHHHHHHH--HT--CSCCCEEEEEECSSCEEEEEETTTTS
T ss_pred cceEEEcC-CCCCcceEEECCCC-eEEEEEecCCcEEEEEhhHhhhhh--cc--cccceeEEEeecccccccceeccceE
Confidence 1222333 24678899999999 777788889999999987621000 00 000133444443332 224456
Q ss_pred eCCCCCcEEEEEeCC-CcE-----------EEEecCCCCC
Q 014472 382 WNPCEDWVISSVAED-NIL-----------QIWQMAENIY 409 (424)
Q Consensus 382 ~~~~~~~~l~s~~~d-~~i-----------~iw~~~~~~~ 409 (424)
++|||++++++.... .++ +++|++.+.+
T Consensus 395 ~~~DGk~l~~~Nk~skdr~~~~gp~~~~~~ql~dis~~~m 434 (595)
T 1fwx_A 395 LDATNDWLVCLSKFSKDRFLNVGPLKPENDQLIDISGDKM 434 (595)
T ss_dssp TTCCSSEEEEEESCCTTSSCCCCSSCCEEEEEEECSSSSC
T ss_pred eCCCCCEEEEcCCCCccccccCCCCCCCcceEEEcCCCcE
Confidence 789999766555432 234 8899976654
No 224
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=99.00 E-value=1.3e-07 Score=81.41 Aligned_cols=208 Identities=14% Similarity=0.121 Sum_probs=139.7
Q ss_pred cEEEEEEeccCCc--eeEEEecCCCCcEEEEEec--CCeEEEEeCCCCCCCCCCCCCCCCcEEEec-CCCCeeeEEecCC
Q 014472 115 KVQIIQQINHDGE--VNRARYMPQNPFLIATKTV--SAEVYVFDYSKHPSKPPLDGACSPDLRLRG-HSTEGYGLSWSKF 189 (424)
Q Consensus 115 ~~~~~~~~~h~~~--v~~i~~~p~~~~~latg~~--dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~-h~~~v~~l~~~~~ 189 (424)
..+++.+++|... ...++|+|++. ++++.+. ++.|+++|..+ .+....+.- .......+++.
T Consensus 8 ~~~vv~~~p~~~~~f~~Gl~~~~dg~-Lyvstg~~~~s~v~~iD~~t----------g~v~~~i~l~~~~fgeGi~~~-- 74 (266)
T 2iwa_A 8 IVEVLNEFPHDPYAFTQGLVYAENDT-LFESTGLYGRSSVRQVALQT----------GKVENIHKMDDSYFGEGLTLL-- 74 (266)
T ss_dssp EEEEEEEEECCTTCCEEEEEECSTTE-EEEEECSTTTCEEEEEETTT----------CCEEEEEECCTTCCEEEEEEE--
T ss_pred CceEEEEEECCCCCCcccEEEeCCCe-EEEECCCCCCCEEEEEECCC----------CCEEEEEecCCCcceEEEEEe--
Confidence 5678899999865 57999999864 5554432 57999999987 333333331 11122345554
Q ss_pred CCceEEEEeCCCcEEEEeCCCCCCCCcccceeeeecCCcceeeEEeeCCCCcEEEEEeCCCeEEEEECCCCCCCCCeeEe
Q 014472 190 KEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSV 269 (424)
Q Consensus 190 ~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~~s~~~dg~i~i~d~~~~~~~~~~~~~ 269 (424)
+..+.++.-.++.+.++|..+.+. +..+..... ....+++++..++++- .++.|.++|..+.+. +..+
T Consensus 75 g~~lyv~t~~~~~v~viD~~t~~v------~~~i~~g~~--~g~glt~Dg~~l~vs~-gs~~l~viD~~t~~v---~~~I 142 (266)
T 2iwa_A 75 NEKLYQVVWLKNIGFIYDRRTLSN------IKNFTHQMK--DGWGLATDGKILYGSD-GTSILYEIDPHTFKL---IKKH 142 (266)
T ss_dssp TTEEEEEETTCSEEEEEETTTTEE------EEEEECCSS--SCCEEEECSSSEEEEC-SSSEEEEECTTTCCE---EEEE
T ss_pred CCEEEEEEecCCEEEEEECCCCcE------EEEEECCCC--CeEEEEECCCEEEEEC-CCCeEEEEECCCCcE---EEEE
Confidence 444556666789999999976532 333321111 1234556788888654 688999999988664 3333
Q ss_pred cc--c---CCCeeEEEecCCCCeEEEEEeCCCcEEEEECCCCCCcceeecCC-------------CCCEEEEEEcCCCCc
Q 014472 270 VA--H---QSEVNCLAFNPFNEWILATGSTDKTVKLFDLRKISTALHTFDSH-------------KEEVFQVGWNPKNET 331 (424)
Q Consensus 270 ~~--~---~~~v~~i~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~-------------~~~v~~~~~sp~~~~ 331 (424)
.. . -..++.+.|. ++ .+++....++.|.+.|..+ ++.+..+... ......++|+|+++.
T Consensus 143 ~Vg~~~~p~~~~nele~~-dg-~lyvn~~~~~~V~vID~~t-g~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~ 219 (266)
T 2iwa_A 143 NVKYNGHRVIRLNELEYI-NG-EVWANIWQTDCIARISAKD-GTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKR 219 (266)
T ss_dssp ECEETTEECCCEEEEEEE-TT-EEEEEETTSSEEEEEETTT-CCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTE
T ss_pred EECCCCcccccceeEEEE-CC-EEEEecCCCCeEEEEECCC-CcEEEEEECCCcccccccccccccCceEEEEEcCCCCE
Confidence 21 1 1246788888 55 4666666788999999998 6666666532 135689999999988
Q ss_pred EEEEEeCCCeEEEeeCCCC
Q 014472 332 ILASCCLGRRLMVWDLSRI 350 (424)
Q Consensus 332 ~l~s~~~dg~i~iwd~~~~ 350 (424)
+++++...+.+...++...
T Consensus 220 lfVTgk~~~~v~~i~l~~~ 238 (266)
T 2iwa_A 220 IFVTGKLWPKLFEIKLHLV 238 (266)
T ss_dssp EEEEETTCSEEEEEEEEEC
T ss_pred EEEECCCCCeEEEEEEecc
Confidence 9999989999999888653
No 225
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=98.99 E-value=5.3e-08 Score=88.52 Aligned_cols=213 Identities=9% Similarity=-0.092 Sum_probs=121.9
Q ss_pred EEEEeccCCceeEEEecCCCCcEEEEEe---------cCCeEEEEeCCCCCCCCCCCCCCCCcEEEecC-------CCCe
Q 014472 118 IIQQINHDGEVNRARYMPQNPFLIATKT---------VSAEVYVFDYSKHPSKPPLDGACSPDLRLRGH-------STEG 181 (424)
Q Consensus 118 ~~~~~~h~~~v~~i~~~p~~~~~latg~---------~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~h-------~~~v 181 (424)
++.++.-...- .+.++|+++.+.++.. .++.|.+||..+ .+...++... ....
T Consensus 58 v~~~i~vG~~P-~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T----------~~vv~~I~v~~~~~~~~g~~P 126 (368)
T 1mda_H 58 TLGHSLGAFLS-LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVT----------FLPIADIELPDAPRFSVGPRV 126 (368)
T ss_dssp EEEEEEECTTC-EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTT----------CCEEEEEEETTSCSCCBSCCT
T ss_pred EEEEEeCCCCC-ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCC----------CCEEEEEECCCccccccCCCc
Confidence 34444433233 7999999986555542 468999999988 4555565432 1346
Q ss_pred eeEEecCCCCceEEEEeC--CCcEEE--EeCCCCCCCCcccc---eeeeecC---------CcceeeEEe----------
Q 014472 182 YGLSWSKFKEGHLLSGSD--DAQICL--WDINAAPKNKSLEA---MQIFKVH---------EGVVEDVAW---------- 235 (424)
Q Consensus 182 ~~l~~~~~~~~~l~s~~~--dg~i~v--wd~~~~~~~~~~~~---~~~~~~~---------~~~v~~i~~---------- 235 (424)
..++++|++. +|+++.. +..|.+ +|+.+ ...+.. ......+ .+.+..+..
T Consensus 127 ~~ia~SpDGk-~lyVan~~~~~~v~V~~iD~~t---v~~i~v~~~~~~~p~g~~~~~~~~~dg~~~~vd~~~~~~~~~~v 202 (368)
T 1mda_H 127 HIIGNCASSA-CLLFFLFGSSAAAGLSVPGASD---DQLTKSASCFHIHPGAAATHYLGSCPASLAASDLAAAPAAAGIV 202 (368)
T ss_dssp TSEEECTTSS-CEEEEECSSSCEEEEEETTTEE---EEEEECSSCCCCEEEETTEEECCCCTTSCEEEECCSSCCCCEEC
T ss_pred ceEEEcCCCC-EEEEEccCCCCeEEEEEEchhh---ceEEECCCceEEccCCCeEEEEEcCCCCEEEEECccccccCCeE
Confidence 7899999998 4666653 467888 88854 111100 0000000 000000000
Q ss_pred ----------------eCCCCcEEEEEeCCCeEEEEECCCCCCCCCeeEec-------c---cCCCeeEEEecCCCCeEE
Q 014472 236 ----------------HLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVV-------A---HQSEVNCLAFNPFNEWIL 289 (424)
Q Consensus 236 ----------------~~~~~~~~~s~~~dg~i~i~d~~~~~~~~~~~~~~-------~---~~~~v~~i~~~~~~~~~l 289 (424)
.+++..++ ..+. +.|.+.|+..... +.+..+. . .......++++|++++++
T Consensus 203 ~~~~t~~i~vg~~P~~~~~~~~~~-~vs~-~~V~viD~~~~~~-~v~~~~~~~~~~~~~~~~~p~g~~~v~~s~dg~~ly 279 (368)
T 1mda_H 203 GAQCTGAQNCSSQAAQANYPGMLV-WAVA-SSILQGDIPAAGA-TMKAAIDGNESGRKADNFRSAGFQMVAKLKNTDGIM 279 (368)
T ss_dssp CCCSCTTSCBCSCCEEETTTTEEE-ECBS-SCCEEEECCSSCC-EEECCCCSSCTHHHHTTEEECSSSCEEEETTTTEEE
T ss_pred EEEeeeeeeCCCCccccccCCEEE-EEcC-CEEEEEECCCCcc-eEEEEEEeccccccccccccCcceeeEEcCCCCEEE
Confidence 22222222 2222 5566666543210 0000000 0 011122378999998766
Q ss_pred EEEe---C-----CCcEEEEECCCCCCcceeecCCCCCEEEEEEcCCCCcEEEEEe-CCCeEEEeeCCCC
Q 014472 290 ATGS---T-----DKTVKLFDLRKISTALHTFDSHKEEVFQVGWNPKNETILASCC-LGRRLMVWDLSRI 350 (424)
Q Consensus 290 ~~g~---~-----dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~s~~-~dg~i~iwd~~~~ 350 (424)
++.. . ++.+.++|+.+ .+.+..+... .....++|+|+++.++++.. .++.|.++|+.+.
T Consensus 280 V~~~~~~~~~~~~~~~~~ViD~~t-~~vv~~i~vg-~~p~gi~~s~Dg~~l~va~~~~~~~VsVID~~t~ 347 (368)
T 1mda_H 280 ILTVEHSRSCLAAAENTSSVTASV-GQTSGPISNG-HDSDAIIAAQDGASDNYANSAGTEVLDIYDAASD 347 (368)
T ss_dssp EEEEECSSCTTSCEEEEEEEESSS-CCEEECCEEE-EEECEEEECCSSSCEEEEEETTTTEEEEEESSSC
T ss_pred EEeccccCcccccCCCEEEEECCC-CeEEEEEECC-CCcceEEECCCCCEEEEEccCCCCeEEEEECCCC
Confidence 5544 2 23566999998 5667776653 36889999999987888888 6999999999986
No 226
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=98.96 E-value=8.8e-08 Score=85.40 Aligned_cols=205 Identities=12% Similarity=0.072 Sum_probs=130.6
Q ss_pred cEEEecCCCCeeeEEecCCCCceEEEEeCCCcEEEEeCCCCCCCCcccceeeeecCCcceeeEEeeCCCCcEEEEEeCCC
Q 014472 171 DLRLRGHSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQ 250 (424)
Q Consensus 171 ~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~~s~~~dg 250 (424)
...+........+..|+|++..++++...++.|..|+.. +. ...+..+...+..+++++++. ++++...++
T Consensus 37 ~~~l~~~~~~~egp~~~~~g~~l~~~d~~~~~i~~~~~~-g~-------~~~~~~~~~~~~gl~~d~dG~-l~v~~~~~~ 107 (305)
T 3dr2_A 37 LLTLYDQATWSEGPAWWEAQRTLVWSDLVGRRVLGWRED-GT-------VDVLLDATAFTNGNAVDAQQR-LVHCEHGRR 107 (305)
T ss_dssp CEEEECCCSSEEEEEEEGGGTEEEEEETTTTEEEEEETT-SC-------EEEEEESCSCEEEEEECTTSC-EEEEETTTT
T ss_pred eEEEecCCcCccCCeEeCCCCEEEEEECCCCEEEEEeCC-CC-------EEEEeCCCCccceeeECCCCC-EEEEECCCC
Confidence 344555556678899999988677888888999999873 31 223444566789999999986 665555567
Q ss_pred eEEEEECCCCCCCCCeeEecc-----cCCCeeEEEecCCCCeEEEE----EeC-------------CCcEEEEECCCCCC
Q 014472 251 YLLIWDLRTPSVSKPVQSVVA-----HQSEVNCLAFNPFNEWILAT----GST-------------DKTVKLFDLRKIST 308 (424)
Q Consensus 251 ~i~i~d~~~~~~~~~~~~~~~-----~~~~v~~i~~~~~~~~~l~~----g~~-------------dg~i~iwd~~~~~~ 308 (424)
.|.+|+.. +. +..+.. ....++.++++|+|. ++++ |.. .+.|..||..+ +.
T Consensus 108 ~v~~~~~~-g~----~~~~~~~~~~~~~~~~~~i~~d~dG~-l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~-g~ 180 (305)
T 3dr2_A 108 AITRSDAD-GQ----AHLLVGRYAGKRLNSPNDLIVARDGA-IWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDG-SP 180 (305)
T ss_dssp EEEEECTT-SC----EEEEECEETTEECSCCCCEEECTTSC-EEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSS-CC
T ss_pred EEEEECCC-CC----EEEEEeccCCCccCCCCCEEECCCCC-EEEeCcCCCccccccccccccccCCCeEEEEcCCC-Cc
Confidence 89999975 33 222211 123577899999997 5665 332 24577777654 33
Q ss_pred cceeecCCCCCEEEEEEcCCCCcEEEEEeC-----CCeEEEeeCCCCCcccCCCccCCCCCeeeEEEcCCCCCcceEEeC
Q 014472 309 ALHTFDSHKEEVFQVGWNPKNETILASCCL-----GRRLMVWDLSRIDEEQTPEDAEDGPPELLFIHGGHTSKISDFSWN 383 (424)
Q Consensus 309 ~~~~~~~~~~~v~~~~~sp~~~~~l~s~~~-----dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~ 383 (424)
... +. .......++|+|+++.++++.+. .+.|.+|++..... .. ...+ ..........+++.
T Consensus 181 ~~~-~~-~~~~p~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~l-~~---------~~~~-~~~~~~~pdgi~~d 247 (305)
T 3dr2_A 181 LQR-MA-DLDHPNGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGAL-HD---------RRHF-ASVPDGLPDGFCVD 247 (305)
T ss_dssp CEE-EE-EESSEEEEEECTTSSEEEEEECCC---CCCEEEEEEEETTEE-EE---------EEEE-ECCSSSCCCSEEEC
T ss_pred EEE-Ee-cCCCCcceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCCCc-cC---------CeEE-EECCCCCCCeEEEC
Confidence 322 22 34567889999999754444333 26899999864320 00 1111 11123446789999
Q ss_pred CCCCcEEEEEeCCCcEEEEecCCC
Q 014472 384 PCEDWVISSVAEDNILQIWQMAEN 407 (424)
Q Consensus 384 ~~~~~~l~s~~~d~~i~iw~~~~~ 407 (424)
++|. +.++. .+ .|.+|+....
T Consensus 248 ~~G~-lwv~~-~~-gv~~~~~~g~ 268 (305)
T 3dr2_A 248 RGGW-LWSSS-GT-GVCVFDSDGQ 268 (305)
T ss_dssp TTSC-EEECC-SS-EEEEECTTSC
T ss_pred CCCC-EEEec-CC-cEEEECCCCC
Confidence 9999 55554 44 4999998654
No 227
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=98.94 E-value=2e-07 Score=85.41 Aligned_cols=212 Identities=12% Similarity=0.123 Sum_probs=132.1
Q ss_pred eEEec--CCCCceEEEEeCCCcEEEEeCCCCCCCCcccceeeee------c-CCcceeeEEeeCCCCcEEEEEeCC----
Q 014472 183 GLSWS--KFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFK------V-HEGVVEDVAWHLRHEYLFGSVGDD---- 249 (424)
Q Consensus 183 ~l~~~--~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~------~-~~~~v~~i~~~~~~~~~~~s~~~d---- 249 (424)
+..++ ++++.+++++..++.|.++|+.+..... +....+. . .......+...|++ +++++..+
T Consensus 86 ~~~~~~~~~r~~l~v~~l~s~~I~viD~~t~p~~p--~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG--i~Vs~~g~~~g~ 161 (462)
T 2ece_A 86 CPNGKPNIERRFLIVPGLRSSRIYIIDTKPNPREP--KIIKVIEPEEVKKVSGYSRLHTVHCGPDA--IYISALGNEEGE 161 (462)
T ss_dssp STTCCTTCCSCEEEEEBTTTCCEEEEECCSCTTSC--EEEEEECHHHHHHHHCEEEEEEEEECSSC--EEEEEEEETTSC
T ss_pred ccccCCCccCCEEEEccCCCCeEEEEECCCCCCCc--eeeeeechhhcccccCCCcccceeECCCe--EEEEcCCCcCCC
Confidence 33446 7777667778889999999997553221 2222221 1 11245677888998 55566555
Q ss_pred --CeEEEEECCCCCCCCCeeEecccC---CCeeEEEecCCCCeEEEEEe-------------------CCCcEEEEECCC
Q 014472 250 --QYLLIWDLRTPSVSKPVQSVVAHQ---SEVNCLAFNPFNEWILATGS-------------------TDKTVKLFDLRK 305 (424)
Q Consensus 250 --g~i~i~d~~~~~~~~~~~~~~~~~---~~v~~i~~~~~~~~~l~~g~-------------------~dg~i~iwd~~~ 305 (424)
|.|.++|..+.+. +..+.... ..-..+-|+|+++ .+++.. ...+|.+||+.+
T Consensus 162 ~~g~v~vlD~~T~~v---~~~~~~~~~~~~~~Yd~~~~p~~~-~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~ 237 (462)
T 2ece_A 162 GPGGILMLDHYSFEP---LGKWEIDRGDQYLAYDFWWNLPNE-VLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRK 237 (462)
T ss_dssp SCCEEEEECTTTCCE---EEECCSBCTTCCCCCCEEEETTTT-EEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTT
T ss_pred CCCeEEEEECCCCeE---EEEEccCCCCccccceEEECCCCC-EEEEccCcCccccccccchhhhhhccCCEEEEEECCC
Confidence 7899999998664 44443221 2245688899988 466653 368999999997
Q ss_pred CCCcceeecCC-C-CCEEEEEE--cCCCCcEEEEEe-----CCCeEEEeeCCCCCcccCCCccCCCCCee-eEEE-----
Q 014472 306 ISTALHTFDSH-K-EEVFQVGW--NPKNETILASCC-----LGRRLMVWDLSRIDEEQTPEDAEDGPPEL-LFIH----- 370 (424)
Q Consensus 306 ~~~~~~~~~~~-~-~~v~~~~~--sp~~~~~l~s~~-----~dg~i~iwd~~~~~~~~~~~~~~~~~~~~-~~~~----- 370 (424)
++.+.++... . .....+.| +|+++..++++- .+++|.+|....+.-.. .... +.+... ...+
T Consensus 238 -~k~~~tI~vg~~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~-~~vI-di~~~~v~~~lp~~~~ 314 (462)
T 2ece_A 238 -RKRIHSLTLGEENRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNA-EKVI-EIPAEPLEGNLPEILK 314 (462)
T ss_dssp -TEEEEEEESCTTEEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEE-EEEE-EECCEECCSSCCGGGG
T ss_pred -CcEeeEEecCCCCCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCceeE-EEEE-eCCCcccccccccccc
Confidence 6667777652 1 23445555 999987666666 77888887765321100 0000 000000 0000
Q ss_pred --cCCCCCcceEEeCCCCCcEEEEEeCCCcEEEEecC
Q 014472 371 --GGHTSKISDFSWNPCEDWVISSVAEDNILQIWQMA 405 (424)
Q Consensus 371 --~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iw~~~ 405 (424)
.+-.....++.+++|++++.++.-..+.|.++++.
T Consensus 315 ~f~~~~~~pa~I~lS~DGrfLYVSnrg~d~VavfdV~ 351 (462)
T 2ece_A 315 PFKAVPPLVTDIDISLDDKFLYLSLWGIGEVRQYDIS 351 (462)
T ss_dssp GGTEECCCCCCEEECTTSCEEEEEETTTTEEEEEECS
T ss_pred ccccCCCceeEEEECCCCCEEEEEeCCCCEEEEEEec
Confidence 00013478899999999888887788999999986
No 228
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=98.92 E-value=4e-07 Score=82.75 Aligned_cols=206 Identities=11% Similarity=0.076 Sum_probs=128.3
Q ss_pred ceeEEEecCCCCcEEEEEe-cCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCCeeeEEecCCCCceEEEEeCCCcEEE
Q 014472 127 EVNRARYMPQNPFLIATKT-VSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDDAQICL 205 (424)
Q Consensus 127 ~v~~i~~~p~~~~~latg~-~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~v 205 (424)
....++|+|+++.++++.. .++.|.++|+.+ .+...++.-- + +....|.+...+++.+.||.+.+
T Consensus 138 ~P~~~a~spDGk~lyVan~~~~~~VsVID~~t----------~~vv~tI~v~-g---~~~~~P~g~~~~~~~~~DG~~~~ 203 (386)
T 3sjl_D 138 YPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEG----------KAFKRMLDVP-D---CYHIFPTAPDTFFMHCRDGSLAK 203 (386)
T ss_dssp CGGGEEECTTSSEEEEEECSSSCEEEEEETTT----------TEEEEEEECC-S---EEEEEEEETTEEEEEETTSCEEE
T ss_pred CCceEEEcCCCCEEEEEEcCCCCeEEEEECCC----------CcEEEEEECC-C---cceeecCCCceeEEECCCCCEEE
Confidence 5667999999986565543 368999999988 3444444321 1 12223555556888889999999
Q ss_pred EeCCCCCCCCcccceeeeecCCccee-eEEee-CCCCcEEEEEeCCCeEEEEECCCCCC--CCCeeEec-------ccCC
Q 014472 206 WDINAAPKNKSLEAMQIFKVHEGVVE-DVAWH-LRHEYLFGSVGDDQYLLIWDLRTPSV--SKPVQSVV-------AHQS 274 (424)
Q Consensus 206 wd~~~~~~~~~~~~~~~~~~~~~~v~-~i~~~-~~~~~~~~s~~~dg~i~i~d~~~~~~--~~~~~~~~-------~~~~ 274 (424)
.++........ .....+..-..++. ...|. ++++.++ .+.+|.|++.|+..... ..++..+. -...
T Consensus 204 v~~~~~g~v~~-~~~~~~~~~~~~~~~~~~~~~~dG~~~~--vs~~g~V~v~d~~~~~~~v~~~~~~~~~~~~~~g~~p~ 280 (386)
T 3sjl_D 204 VAFGTEGTPEI-THTEVFHPEDEFLINHPAYSQKAGRLVW--PTYTGKIHQIDLSSGDAKFLPAVEALTEAERADGWRPG 280 (386)
T ss_dssp EECCSSSCCEE-EECCCCSCTTSCBCSCCEEETTTTEEEE--EBTTSEEEEEECTTSSCEECCCEESSCHHHHHTTEEEC
T ss_pred EECCCCCeEEE-eecceeccccccccccceeEcCCCcEEE--EeCCCEEEEEECCCCcceeecceeccccccccccccCC
Confidence 99976322210 00011111112222 24564 5664333 55689999999976542 22221010 0123
Q ss_pred CeeEEEecCCCCeEEEEEeC---------CCcEEEEECCCCCCcceeecCCCCCEEEEEEcCCCCcEEEE-EeCCCeEEE
Q 014472 275 EVNCLAFNPFNEWILATGST---------DKTVKLFDLRKISTALHTFDSHKEEVFQVGWNPKNETILAS-CCLGRRLMV 344 (424)
Q Consensus 275 ~v~~i~~~~~~~~~l~~g~~---------dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~s-~~~dg~i~i 344 (424)
....++++++++.++++... ...|.++|+.+ .+.+..+.. ...+.+++++++++.+|++ ...++.|.+
T Consensus 281 g~q~~a~~~~~~~lyV~~~~~~~~~hk~~~~~V~viD~~t-~kv~~~i~v-g~~~~~lavs~D~~~~ly~tn~~~~~VsV 358 (386)
T 3sjl_D 281 GWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKT-GERLAKFEM-GHEIDSINVSQDEKPLLYALSTGDKTLYI 358 (386)
T ss_dssp SSSCEEEETTTTEEEEEEEECCTTCTTSCEEEEEEEETTT-CCEEEEEEE-EEEECEEEECSSSSCEEEEEETTTTEEEE
T ss_pred CcceeeECCCCCeEEEEeccccccccCCCCCEEEEEECCC-CeEEEEEEC-CCCcceEEECCCCCeEEEEEcCCCCeEEE
Confidence 44567789988876665431 25799999998 677777764 3478899999999644555 556899999
Q ss_pred eeCCCCC
Q 014472 345 WDLSRID 351 (424)
Q Consensus 345 wd~~~~~ 351 (424)
+|..+++
T Consensus 359 iD~~t~k 365 (386)
T 3sjl_D 359 HDAESGE 365 (386)
T ss_dssp EETTTCC
T ss_pred EECCCCc
Confidence 9998864
No 229
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=98.92 E-value=8.1e-08 Score=87.20 Aligned_cols=216 Identities=11% Similarity=0.050 Sum_probs=127.4
Q ss_pred CCeeeEEecCCCCceEEEEe--CCCcEEEEeCCCCCCCCcccce-eeeecCCcceeeEEeeCCCCcEEEEEeC-----CC
Q 014472 179 TEGYGLSWSKFKEGHLLSGS--DDAQICLWDINAAPKNKSLEAM-QIFKVHEGVVEDVAWHLRHEYLFGSVGD-----DQ 250 (424)
Q Consensus 179 ~~v~~l~~~~~~~~~l~s~~--~dg~i~vwd~~~~~~~~~~~~~-~~~~~~~~~v~~i~~~~~~~~~~~s~~~-----dg 250 (424)
..+..+++++++. ++++.. .++.++||.+.++.. ..+... .....+-..+..+++++++. ++++-.. ++
T Consensus 17 ~~p~~va~~~~g~-~~v~~~~~~~~~~~l~~~~~g~~-~~~p~~~~~~~~~~~~p~gv~~d~~g~-L~v~D~g~~~~~~~ 93 (343)
T 2qe8_A 17 LAPGNITLTPDGR-LFLSLHQFYQPEMQVAELTQDGL-IPFPPQSGNAIITFDTVLGIKSDGNGI-VWMLDNGNQSKSVP 93 (343)
T ss_dssp SCEEEEEECTTSC-EEEEECGGGCCSCSEEEEETTEE-EESCCCCSSCCCCCSCEEEEEECSSSE-EEEEECHHHHTSCC
T ss_pred CCcceEEECCCCC-EEEEeCCCCCCceEEEEECCCCe-ecCCCcccCcccceeEeeEEEEcCCCc-EEEEcCCCCcCCCC
Confidence 6789999999887 666653 234355665542211 100000 01123456899999999975 6655433 57
Q ss_pred eEEEEECCCCCCCCCeeEecc------cCCCeeEEEecCCCCeEEEEEe---CCCcEEEEECCCCCCcceeecCC-----
Q 014472 251 YLLIWDLRTPSVSKPVQSVVA------HQSEVNCLAFNPFNEWILATGS---TDKTVKLFDLRKISTALHTFDSH----- 316 (424)
Q Consensus 251 ~i~i~d~~~~~~~~~~~~~~~------~~~~v~~i~~~~~~~~~l~~g~---~dg~i~iwd~~~~~~~~~~~~~~----- 316 (424)
.|.+||+.+++. +..+.. +...+..+++++++..++++.. .++.|.+||+.+ +.....+..|
T Consensus 94 ~i~~~d~~tg~~---~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~-g~~~r~~~~~~~~~~ 169 (343)
T 2qe8_A 94 KLVAWDTLNNQL---SRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQT-GLAARVLQGYPGIAP 169 (343)
T ss_dssp EEEEEETTTTEE---EEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTT-CCEEEECTTCTTTSC
T ss_pred eEEEEECCCCeE---EEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCC-CCEEEEecCCCcccc
Confidence 899999987653 222221 2345789999987665666655 678999999875 3333333221
Q ss_pred ------------------------CCCEEEEEEcCCCCcEEEEEeCCC-eEEEeeCCCCCcccCCCccCCCCCeeeEEEc
Q 014472 317 ------------------------KEEVFQVGWNPKNETILASCCLGR-RLMVWDLSRIDEEQTPEDAEDGPPELLFIHG 371 (424)
Q Consensus 317 ------------------------~~~v~~~~~sp~~~~~l~s~~~dg-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~ 371 (424)
...+..++|+|+++. |+.+..++ .+..++........ ..... ....+ ...
T Consensus 170 ~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~-ly~~~~~~~~l~~~~~~~~~~~~-~~~~~--~~~~~-~~~ 244 (343)
T 2qe8_A 170 EDIDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEW-LYLSPMHSTSMYRIKSADLSNLQ-LTDAE--LGSKI-ERY 244 (343)
T ss_dssp CSCCCEETTEECBEECTTSCEECCCCCEEEEEECTTSCE-EEEEESSCSEEEEEEHHHHTCTT-CCHHH--HHTTC-EEE
T ss_pred cccceeECCEEEEeccCCCceeceecccceeEeccCCCE-EEEEeCCCCeEEEEEHHHhcCCC-CChhh--hhcce-Eec
Confidence 123688999999974 55555544 44444432110000 00000 00000 111
Q ss_pred CCCCCcceEEeCCCCCcEEEEEeCCCcEEEEecCCC
Q 014472 372 GHTSKISDFSWNPCEDWVISSVAEDNILQIWQMAEN 407 (424)
Q Consensus 372 ~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iw~~~~~ 407 (424)
++......++++++|. ++++...++.|.+|+..++
T Consensus 245 g~~g~pdgia~d~~G~-l~va~~~~~~V~~~d~~~G 279 (343)
T 2qe8_A 245 SEKPICDGISIDKDHN-IYVGDLAHSAIGVITSADR 279 (343)
T ss_dssp EECCSCSCEEECTTCC-EEEEEGGGTEEEEEETTTT
T ss_pred ccCCCCceEEECCCCC-EEEEccCCCeEEEEECCCC
Confidence 2334567899999998 7888888999999999444
No 230
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=98.92 E-value=2e-07 Score=86.21 Aligned_cols=248 Identities=9% Similarity=-0.011 Sum_probs=143.3
Q ss_pred CCCcEEEEEecC----CeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCCeeeEEecCCCCceEEEEe----------CCC
Q 014472 136 QNPFLIATKTVS----AEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGS----------DDA 201 (424)
Q Consensus 136 ~~~~~latg~~d----g~v~iwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~----------~dg 201 (424)
++..++++...+ +.|.++|..+ .+...++..-..+ .++++|+++. |+++. .++
T Consensus 83 ~~~~vyV~n~~~~~~~~~VsVID~~t----------~~vv~~I~vG~~P--gia~SpDgk~-lyVan~~~~~~~~G~~~~ 149 (426)
T 3c75_H 83 DARRVYIQDPAHFAAITQQFVIDGST----------GRILGMTDGGFLP--HPVAAEDGSF-FAQASTVFERIARGKRTD 149 (426)
T ss_dssp CTTEEEEEECTTTCSSEEEEEEETTT----------TEEEEEEEECSSC--EEEECTTSSC-EEEEEEEEEETTEEEEEE
T ss_pred CCCEEEEECCCcCCCCCeEEEEECCC----------CEEEEEEECCCCC--ceEECCCCCE-EEEEeccccccccCCCCC
Confidence 444455554433 7999999987 4555555544444 8999999985 55443 467
Q ss_pred cEEEEeCCCCCCCCcccce--eeeecCCcceeeEEeeCCCCcEEEEEeC-CCeEEEEECCCCCCCCCeeEecccCCCeeE
Q 014472 202 QICLWDINAAPKNKSLEAM--QIFKVHEGVVEDVAWHLRHEYLFGSVGD-DQYLLIWDLRTPSVSKPVQSVVAHQSEVNC 278 (424)
Q Consensus 202 ~i~vwd~~~~~~~~~~~~~--~~~~~~~~~v~~i~~~~~~~~~~~s~~~-dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~ 278 (424)
.|.++|..+.+....+..- ..+ ........+.++|++++++++... ++.|.++|+.+.+. +..+... . +
T Consensus 150 ~VsviD~~t~~vv~~I~v~g~~r~-~~g~~P~~~~~spDGk~lyV~n~~~~~~VsVID~~t~kv---v~~I~v~-g---~ 221 (426)
T 3c75_H 150 YVEVFDPVTFLPIADIELPDAPRF-LVGTYQWMNALTPDNKNLLFYQFSPAPAVGVVDLEGKTF---DRMLDVP-D---C 221 (426)
T ss_dssp EEEEECTTTCCEEEEEEETTCCCC-CBSCCGGGSEECTTSSEEEEEECSSSCEEEEEETTTTEE---EEEEECC-S---E
T ss_pred EEEEEECCCCcEEEEEECCCcccc-ccCCCcceEEEcCCCCEEEEEecCCCCeEEEEECCCCeE---EEEEEcC-C---c
Confidence 8999999876432221100 000 012345688999999988866543 68999999998664 4443321 1 1
Q ss_pred EEecCCCCeEEEEEeCCCcEEEEECCCCCCcce----eecCCCCCE-EEEEEcCCCCcEEEEEeCCCeEEEeeCCCCCcc
Q 014472 279 LAFNPFNEWILATGSTDKTVKLFDLRKISTALH----TFDSHKEEV-FQVGWNPKNETILASCCLGRRLMVWDLSRIDEE 353 (424)
Q Consensus 279 i~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~----~~~~~~~~v-~~~~~sp~~~~~l~s~~~dg~i~iwd~~~~~~~ 353 (424)
....|.+...+++.+.||.+.+.++.. ++... .+.....++ ..+.+.+++..+++ .+..+.+.+.|+......
T Consensus 222 ~~~~p~g~~~~v~~~~dG~~~~V~~~~-~~v~~~~~~~~~v~~~p~~~~~~~~~dg~~~~~-~s~~g~V~ViD~~~~~~~ 299 (426)
T 3c75_H 222 YHIFPASPTVFYMNCRDGSLARVDFAD-GETKVTNTEVFHTEDELLINHPAFSLRSGRLVW-PTYTGKIFQADLTAEGAT 299 (426)
T ss_dssp EEEEEEETTEEEEEETTSSEEEEECCT-TCCEEEECCCCSCTTSCBCSCCEECTTTCEEEE-EBTTSEEEEEEECSSCEE
T ss_pred eeeccCCCcEEEEEcCCCCEEEEECCC-CcEEEEeeeeeccCCCceeeEeeecCCCCEEEE-EeCCCcEEEEeccCCceE
Confidence 334455545677777888888888843 33331 122212222 23567888875554 456789999998653211
Q ss_pred cCCCccC-CCCCeeeEEEcCCCCCcceEEeCCCCCcEEEEEeC---------CCcEEEEecCCCCC
Q 014472 354 QTPEDAE-DGPPELLFIHGGHTSKISDFSWNPCEDWVISSVAE---------DNILQIWQMAENIY 409 (424)
Q Consensus 354 ~~~~~~~-~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~---------d~~i~iw~~~~~~~ 409 (424)
....... ......... .......++++|+++.++++... ++.|.+.|+.+...
T Consensus 300 v~~~~~~~~~~~i~~g~---~p~g~~~va~s~dg~rlyVa~~~~~~gthk~~s~~VsVID~~T~kv 362 (426)
T 3c75_H 300 FRAPIEALTEAERADDW---RPGGWQQTAYHRQSDRIYLLVDQRDEWKHKAASRFVVVLNAETGER 362 (426)
T ss_dssp ECCCEESSCTTTGGGTE---EECSSSCEEEEGGGTEEEEEEEECCTTCTTSCEEEEEEEETTTCCE
T ss_pred Eeeeeeecccccccccc---ccCCceeeEEcCCCCEEEEEecccccccccCCCCEEEEEECCCCeE
Confidence 0000000 000000000 01122347899998866666431 35799999988754
No 231
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=98.91 E-value=1.4e-09 Score=99.85 Aligned_cols=179 Identities=11% Similarity=0.037 Sum_probs=94.7
Q ss_pred EEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCCeeeEEecCCCCceEEEEeCCCcEEEEeCCCCCCCCcccc
Q 014472 140 LIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEA 219 (424)
Q Consensus 140 ~latg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~ 219 (424)
.+++++.||.|+.||..+ .+....+.. +.+.+..+..++. ++++++.||.|+.||..+++....+.
T Consensus 11 ~v~~gs~dg~v~a~d~~t----------G~~~W~~~~--~~~~s~p~~~~g~-~~v~~s~dg~l~a~d~~tG~~~w~~~- 76 (369)
T 2hz6_A 11 LLFVSTLDGSLHAVSKRT----------GSIKWTLKE--DPVLQVPTHVEEP-AFLPDPNDGSLYTLGSKNNEGLTKLP- 76 (369)
T ss_dssp EEEEEETTSEEEEEETTT----------CCEEEEEEC--CCSCCCC-----C-CEEECTTTCCEEEC-----CCSEECS-
T ss_pred EEEEEcCCCEEEEEECCC----------CCEEEEecC--CCceecceEcCCC-EEEEeCCCCEEEEEECCCCceeeeee-
Confidence 788889999999999887 344555554 4555555556554 67777899999999998775432221
Q ss_pred eeeeecCC-ccee-eEEeeCCCCcEEEEEeCCCeEEEEECCCCCCCCCeeEecccCCCeeEEEecCCCCeEEEEEeCCCc
Q 014472 220 MQIFKVHE-GVVE-DVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATGSTDKT 297 (424)
Q Consensus 220 ~~~~~~~~-~~v~-~i~~~~~~~~~~~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~l~~g~~dg~ 297 (424)
.+. ..+. ...+. .+. .+++++.++.|+.||.++++.. ..+..+. ...++|.+. .+++++.++.
T Consensus 77 -----~~~~~~~~~sp~~~-~~~-~v~~g~~dg~v~a~D~~tG~~~---w~~~~~~----~~~~~p~~~-~v~~~~~dg~ 141 (369)
T 2hz6_A 77 -----FTIPELVQASPCRS-SDG-ILYMGKKQDIWYVIDLLTGEKQ---QTLSSAF----ADSLSPSTS-LLYLGRTEYT 141 (369)
T ss_dssp -----CCHHHHHTTCSCC-------CCCCEEEEEEEEECCC------------------------------EEEEEEEEE
T ss_pred -----ccCccccccCceEe-cCC-EEEEEeCCCEEEEEECCCCcEE---EEecCCC----cccccccCC-EEEEEecCCE
Confidence 111 0111 00111 233 3457788999999999988752 2222222 234556666 5788888999
Q ss_pred EEEEECCCCCCcceeecCCCCCEEEEEEcCCC---CcEEEEEeCCCeEEEeeCCCCC
Q 014472 298 VKLFDLRKISTALHTFDSHKEEVFQVGWNPKN---ETILASCCLGRRLMVWDLSRID 351 (424)
Q Consensus 298 i~iwd~~~~~~~~~~~~~~~~~v~~~~~sp~~---~~~l~s~~~dg~i~iwd~~~~~ 351 (424)
|+.||.++ ++.+..+..+. .....+.++. . .+++++.||.|..||..++.
T Consensus 142 v~a~d~~t-G~~~W~~~~~~--~~~~~~~~~~~~~~-~v~~~~~dg~v~a~d~~tG~ 194 (369)
T 2hz6_A 142 ITMYDTKT-RELRWNATYFD--YAASLPEDDVDYKM-SHFVSNGDGLVVTVDSESGD 194 (369)
T ss_dssp EECCCSSS-SSCCCEEEEEE--ECCBCCCCCTTCCC-CEEEEETSCEEEEECTTTCC
T ss_pred EEEEECCC-CCEEEeEeccc--ccCccccCCccccc-eEEEECCCCEEEEEECCCCc
Confidence 99999998 55554443211 1223333321 2 36678889999999998764
No 232
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=98.86 E-value=4.9e-06 Score=74.59 Aligned_cols=240 Identities=8% Similarity=-0.034 Sum_probs=141.5
Q ss_pred CceeEEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEec--------------------CCCCeeeEE
Q 014472 126 GEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRG--------------------HSTEGYGLS 185 (424)
Q Consensus 126 ~~v~~i~~~p~~~~~latg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~--------------------h~~~v~~l~ 185 (424)
....+++|.+++. ++.++..++.|..|+.... ....+.. ....+.+++
T Consensus 19 ~~p~~i~~d~~g~-~l~v~~~~~~i~~~~~~~~-----------~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~ 86 (322)
T 2fp8_A 19 YAPNSFTFDSTNK-GFYTSVQDGRVIKYEGPNS-----------GFVDFAYASPYWNKAFCENSTDAEKRPLCGRTYDIS 86 (322)
T ss_dssp SCCCCEECCTTCS-SEEEECTTSEEEEECCTTT-----------CEEEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEE
T ss_pred CCceEEEEcCCCC-EEEEEcCCCeEEEECCCCC-----------ceEEEecccccccccccccccchhccccCCCCceEE
Confidence 3456788999875 5667788899999987641 1111110 113478899
Q ss_pred ecCCCCceEEEEeCCCcEEEEeCCCCCCCCcccceee-eec-CCcceeeEEeeC-CCCcEEEEEeC--------------
Q 014472 186 WSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQI-FKV-HEGVVEDVAWHL-RHEYLFGSVGD-------------- 248 (424)
Q Consensus 186 ~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~-~~~-~~~~v~~i~~~~-~~~~~~~s~~~-------------- 248 (424)
+.+.+. .|+.+...+.|..+|..++.. ..+.. ..+ .....+.+++.+ ++. ++++-..
T Consensus 87 ~~~~~g-~l~v~d~~~~i~~~d~~~g~~----~~~~~~~~~~~~~~p~~i~~d~~~G~-l~v~d~~~~~~~~~~~~~~~~ 160 (322)
T 2fp8_A 87 YNLQNN-QLYIVDCYYHLSVVGSEGGHA----TQLATSVDGVPFKWLYAVTVDQRTGI-VYFTDVSTLYDDRGVQQIMDT 160 (322)
T ss_dssp EETTTT-EEEEEETTTEEEEECTTCEEC----EEEESEETTEECSCEEEEEECTTTCC-EEEEESCSSCCTTCHHHHHHH
T ss_pred EcCCCC-cEEEEECCCCEEEEeCCCCEE----EEecccCCCCcccccceEEEecCCCE-EEEECCcccccccccceehcc
Confidence 987333 366665555688888764321 11111 111 123478899999 875 5545322
Q ss_pred ---CCeEEEEECCCCCCCCCeeEecccCCCeeEEEecCCCCeEEEEEeCCCcEEEEECCCCC-CcceeecCCCCCEEEEE
Q 014472 249 ---DQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATGSTDKTVKLFDLRKIS-TALHTFDSHKEEVFQVG 324 (424)
Q Consensus 249 ---dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~l~~g~~dg~i~iwd~~~~~-~~~~~~~~~~~~v~~~~ 324 (424)
++.|..+|..++.. ..+.......+.|+++|++..++++-...+.|.+|++.... .....+....+ ...++
T Consensus 161 ~~~~g~v~~~d~~~~~~----~~~~~~~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~~~~g-P~gi~ 235 (322)
T 2fp8_A 161 SDKTGRLIKYDPSTKET----TLLLKELHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTAEVLVKIPN-PGNIK 235 (322)
T ss_dssp TCCCEEEEEEETTTTEE----EEEEEEESCCCEEEECTTSSEEEEEEGGGTEEEEEESSSTTTTCEEEEEECSS-EEEEE
T ss_pred cCCCceEEEEeCCCCEE----EEeccCCccCcceEECCCCCEEEEEeCCCCeEEEEECCCCcCCccceEEeCCC-CCCeE
Confidence 36788888765442 22211223457899999988656665667899999987421 11112211223 78899
Q ss_pred EcCCCCcEEEEEeC----------CCeEEEeeCCCCCcccCCCccCCCCCeeeEEEcCC----CCCcceEEeCCCCCcEE
Q 014472 325 WNPKNETILASCCL----------GRRLMVWDLSRIDEEQTPEDAEDGPPELLFIHGGH----TSKISDFSWNPCEDWVI 390 (424)
Q Consensus 325 ~sp~~~~~l~s~~~----------dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h----~~~v~~~~~~~~~~~~l 390 (424)
+.++|. ++++... .+.|..+|... +.+..+... ...++.+++ .++. ++
T Consensus 236 ~d~~G~-l~va~~~~~~~~~~~~~~~~v~~~d~~G---------------~~~~~~~~~~g~~~~~~~~~~~-~~g~-L~ 297 (322)
T 2fp8_A 236 RNADGH-FWVSSSEELDGNMHGRVDPKGIKFDEFG---------------NILEVIPLPPPFAGEHFEQIQE-HDGL-LY 297 (322)
T ss_dssp ECTTSC-EEEEEEEETTSSTTSCEEEEEEEECTTS---------------CEEEEEECCTTTTTSCCCEEEE-ETTE-EE
T ss_pred ECCCCC-EEEEecCcccccccCCCccEEEEECCCC---------------CEEEEEECCCCCccccceEEEE-eCCE-EE
Confidence 999996 5555443 35677777542 222222221 234666766 3555 77
Q ss_pred EEEeCCCcEEEEecCC
Q 014472 391 SSVAEDNILQIWQMAE 406 (424)
Q Consensus 391 ~s~~~d~~i~iw~~~~ 406 (424)
++....+.|.++++..
T Consensus 298 v~~~~~~~i~~~~~~~ 313 (322)
T 2fp8_A 298 IGTLFHGSVGILVYDK 313 (322)
T ss_dssp EECSSCSEEEEEEC--
T ss_pred EeecCCCceEEEeccc
Confidence 7777788999998864
No 233
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=98.86 E-value=2.5e-05 Score=70.74 Aligned_cols=241 Identities=9% Similarity=-0.011 Sum_probs=148.9
Q ss_pred CceeEEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCCeeeEEecCCCCceEEEEeCCCcEEE
Q 014472 126 GEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDDAQICL 205 (424)
Q Consensus 126 ~~v~~i~~~p~~~~~latg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~v 205 (424)
....|.+..+ .+.++++ . ...|+..++.. .....+......+.+++|.+.+..++.+-...+.|..
T Consensus 34 d~~~C~~~~~-~~~ll~~-~-~~~I~~i~~~g-----------~~~~~~~~~~~~~~~l~~d~~~~~ly~~D~~~~~I~r 99 (349)
T 3v64_C 34 DRRSCKALGP-EPVLLFA-N-RIDIRQVLPHR-----------SEYTLLLNNLENAIALDFHHRRELVFWSDVTLDRILR 99 (349)
T ss_dssp TSSCEEESSS-CCEEEEE-C-BSCEEEECTTS-----------CCEEEEECSCSCEEEEEEETTTTEEEEEETTTTEEEE
T ss_pred CCCccccccc-CceeEee-c-ccceEEEeCCC-----------CeeEEeecCCCceEEEEEeccccEEEEEeccCCceEE
Confidence 3445556555 3334433 3 34577777665 1122333334457899999877655555556788999
Q ss_pred EeCCCCCCCCcccceeeeecCCcceeeEEeeCCCCcEEEEEeCCCeEEEEECCCCCCCCCeeEecccCCCeeEEEecCCC
Q 014472 206 WDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFN 285 (424)
Q Consensus 206 wd~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~~~~ 285 (424)
+++..... .............+++.+.+..++.+-...+.|.+.++..... .......-.....|+++|.+
T Consensus 100 ~~~~g~~~------~~~~~~~~~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~---~~l~~~~l~~P~~iavdp~~ 170 (349)
T 3v64_C 100 ANLNGSNV------EEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHR---KVLLWQSLEKPRAIALHPME 170 (349)
T ss_dssp EETTSCSC------EEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSC---EEEECTTCSCEEEEEEETTT
T ss_pred EecCCCCc------eEEEeCCCCCccEEEEecCCCeEEEEcCCCCeEEEEcCCCCce---EEEEeCCCCCcceEEEecCc
Confidence 99875421 1111112245678899987777887877788999999875431 22222333567899999987
Q ss_pred CeEEEEEeCC-CcEEEEECCCCCCcceee-cCCCCCEEEEEEcCCCCcEEEEEeCCCeEEEeeCCCCCcccCCCccCCCC
Q 014472 286 EWILATGSTD-KTVKLFDLRKISTALHTF-DSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPEDAEDGP 363 (424)
Q Consensus 286 ~~~l~~g~~d-g~i~iwd~~~~~~~~~~~-~~~~~~v~~~~~sp~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~ 363 (424)
.+++++-... +.|..+++.. .....+ ...-.....++++|++..++++-...+.|..+++.....
T Consensus 171 g~ly~td~~~~~~I~r~~~dG--~~~~~~~~~~~~~PnGla~d~~~~~lY~aD~~~~~I~~~~~dG~~~----------- 237 (349)
T 3v64_C 171 GTIYWTDWGNTPRIEASSMDG--SGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHR----------- 237 (349)
T ss_dssp TEEEEEECSSSCEEEEEETTS--CSCEESCCSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC-----------
T ss_pred CeEEEeccCCCCEEEEEeCCC--CCcEEEEECCCCCcceEEEeCCCCEEEEEECCCCEEEEEeCCCCce-----------
Confidence 7777776655 7899998874 222232 222346789999997777777777778899999864211
Q ss_pred CeeeEEEcCCCCCcceEEeCCCCCcEEEEEeCCCcEEEEecCCC
Q 014472 364 PELLFIHGGHTSKISDFSWNPCEDWVISSVAEDNILQIWQMAEN 407 (424)
Q Consensus 364 ~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iw~~~~~ 407 (424)
..+ .........++++. .+ .++++-...+.|...+..++
T Consensus 238 -~~~--~~~~~~~P~giav~-~~-~ly~td~~~~~V~~~~~~~G 276 (349)
T 3v64_C 238 -KAV--ISQGLPHPFAITVF-ED-SLYWTDWHTKSINSANKFTG 276 (349)
T ss_dssp -EEE--ECSSCSSEEEEEEE-TT-EEEEEETTTTEEEEEETTTC
T ss_pred -EEE--EeCCCCCceEEEEE-CC-EEEEecCCCCeEEEEEccCC
Confidence 111 11223345677773 33 36777667777777774443
No 234
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=98.86 E-value=9.2e-07 Score=79.41 Aligned_cols=218 Identities=9% Similarity=-0.003 Sum_probs=137.8
Q ss_pred EEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCCeeeEEecCCCCceEEEEeCCCcEEEEeCCCCCCCCcccc
Q 014472 140 LIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEA 219 (424)
Q Consensus 140 ~latg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~ 219 (424)
.+.+++.++.|..+|... ........+...+.++...+++. +..++.++.|..+|.. +..
T Consensus 109 ~l~v~t~~~~l~~~d~~g-----------~~~~~~~~~~~~~~~~~~~~~g~--l~vgt~~~~l~~~d~~-g~~------ 168 (330)
T 3hxj_A 109 ILYVTSMDGHLYAINTDG-----------TEKWRFKTKKAIYATPIVSEDGT--IYVGSNDNYLYAINPD-GTE------ 168 (330)
T ss_dssp EEEEECTTSEEEEECTTS-----------CEEEEEECSSCCCSCCEECTTSC--EEEECTTSEEEEECTT-SCE------
T ss_pred EEEEEecCCEEEEEcCCC-----------CEEEEEcCCCceeeeeEEcCCCE--EEEEcCCCEEEEECCC-CCE------
Confidence 466677788999998652 22333344444566667666554 7778888999999987 422
Q ss_pred eeeeecCCcceeeEEeeCCCCcEEEEEeCCCeEEEEECCCCCCCCCeeEecccCCCeeEEEecCCCCeEEEEEeCCCcEE
Q 014472 220 MQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATGSTDKTVK 299 (424)
Q Consensus 220 ~~~~~~~~~~v~~i~~~~~~~~~~~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~l~~g~~dg~i~ 299 (424)
...+......+.++...+++. ++ .++ +.|..+| .++.. +.........+.++...+++. |..++.++.|.
T Consensus 169 ~~~~~~~~~~~~~~~~d~~g~-l~-v~t--~~l~~~d-~~g~~---~~~~~~~~~~~~~~~~~~~g~--l~v~t~~~gl~ 238 (330)
T 3hxj_A 169 KWRFKTNDAITSAASIGKDGT-IY-FGS--DKVYAIN-PDGTE---KWNFYAGYWTVTRPAISEDGT--IYVTSLDGHLY 238 (330)
T ss_dssp EEEEECSSCCCSCCEECTTCC-EE-EES--SSEEEEC-TTSCE---EEEECCSSCCCSCCEECTTSC--EEEEETTTEEE
T ss_pred eEEEecCCCceeeeEEcCCCE-EE-EEe--CEEEEEC-CCCcE---EEEEccCCcceeceEECCCCe--EEEEcCCCeEE
Confidence 222233345567777766765 54 444 7899999 55442 334444456688888888775 56677788888
Q ss_pred EEECCCCCCcceeecCCCCCEEEEEEcCCCCcEEEEEeCCCeEEEeeCCCCCcccCCCccCCCCCeeeEEEcCCCCCcce
Q 014472 300 LFDLRKISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPEDAEDGPPELLFIHGGHTSKISD 379 (424)
Q Consensus 300 iwd~~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~ 379 (424)
.+|.. +..+..+......+..+...+++. |..++.+|.|..+|. ++ +.+..+......+.+
T Consensus 239 ~~~~~--g~~~~~~~~~~~~~~~~~~~~~g~--l~v~t~~ggl~~~d~-~g--------------~~~~~~~~~~~~~~~ 299 (330)
T 3hxj_A 239 AINPD--GTEKWRFKTGKRIESSPVIGNTDT--IYFGSYDGHLYAINP-DG--------------TEKWNFETGSWIIAT 299 (330)
T ss_dssp EECTT--SCEEEEEECSSCCCSCCEECTTSC--EEEECTTCEEEEECT-TS--------------CEEEEEECSSCCCSC
T ss_pred EECCC--CCEeEEeeCCCCccccceEcCCCe--EEEecCCCCEEEECC-CC--------------cEEEEEEcCCccccc
Confidence 88743 445555554444455566666663 667788888999985 33 223333333456778
Q ss_pred EEeCCCCCcEEEEEeCCCcEEEEecCCCC
Q 014472 380 FSWNPCEDWVISSVAEDNILQIWQMAENI 408 (424)
Q Consensus 380 ~~~~~~~~~~l~s~~~d~~i~iw~~~~~~ 408 (424)
+...+++. |..++.+|.+++.......
T Consensus 300 ~~~d~~g~--l~~gt~~G~~~~~~~~~~~ 326 (330)
T 3hxj_A 300 PVIDENGT--IYFGTRNGKFYALFNLEHH 326 (330)
T ss_dssp CEECTTCC--EEEECTTSCEEEEEC----
T ss_pred eEEcCCCE--EEEEcCCCeEEEEeccccc
Confidence 88888887 4456789999988766543
No 235
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.84 E-value=9e-07 Score=75.24 Aligned_cols=194 Identities=14% Similarity=0.202 Sum_probs=124.3
Q ss_pred cEEEEEEeccCCce--eEEEecCCCCcEEEEEecCC--eEEEEeCCCCCCCCCCCCCCCCcEEEecCCCCeeeEEecCCC
Q 014472 115 KVQIIQQINHDGEV--NRARYMPQNPFLIATKTVSA--EVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFK 190 (424)
Q Consensus 115 ~~~~~~~~~h~~~v--~~i~~~p~~~~~latg~~dg--~v~iwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~ 190 (424)
..++++.++|.... ..+.|+ ++ .++.+.+.+| .|+++|+.+ .+....+.- ..........+.+
T Consensus 30 ~~~vv~~~phd~~~ftqGL~~~-~~-~LyestG~~g~S~v~~vD~~T----------gkv~~~~~l-~~~~FgeGit~~g 96 (262)
T 3nol_A 30 DYQIVHSYPHDTKAFTEGFFYR-NG-YFYESTGLNGRSSIRKVDIES----------GKTLQQIEL-GKRYFGEGISDWK 96 (262)
T ss_dssp EEEEEEEEECCTTCEEEEEEEE-TT-EEEEEEEETTEEEEEEECTTT----------CCEEEEEEC-CTTCCEEEEEEET
T ss_pred ceEEEEEecCCCCcccceEEEE-CC-EEEEECCCCCCceEEEEECCC----------CcEEEEEec-CCccceeEEEEeC
Confidence 57888999998655 889998 55 4666666665 899999987 333444432 2233332222335
Q ss_pred CceEEEEeCCCcEEEEeCCCCCCCCcccceeeeecCCcceeeEEeeCCCCcEEEEEeCCCeEEEEECCCCCCCCCeeEec
Q 014472 191 EGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVV 270 (424)
Q Consensus 191 ~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~~s~~~dg~i~i~d~~~~~~~~~~~~~~ 270 (424)
..+.++.-.++.+.++|..+.+. +..+... ..-..+ ++++..++++- .++.|.++|..+.+. +..+.
T Consensus 97 ~~ly~ltw~~~~v~v~D~~t~~~------~~ti~~~-~eG~gl--t~dg~~L~~Sd-Gs~~i~~iDp~T~~v---~~~I~ 163 (262)
T 3nol_A 97 DKIVGLTWKNGLGFVWNIRNLRQ------VRSFNYD-GEGWGL--THNDQYLIMSD-GTPVLRFLDPESLTP---VRTIT 163 (262)
T ss_dssp TEEEEEESSSSEEEEEETTTCCE------EEEEECS-SCCCCE--EECSSCEEECC-SSSEEEEECTTTCSE---EEEEE
T ss_pred CEEEEEEeeCCEEEEEECccCcE------EEEEECC-CCceEE--ecCCCEEEEEC-CCCeEEEEcCCCCeE---EEEEE
Confidence 54555556789999999987643 3333321 122334 35677777554 478899999998664 33332
Q ss_pred c--cC---CCeeEEEecCCCCeEEEEEeCCCcEEEEECCCCCCcceeecCC------------CCCEEEEEEcCCCCcEE
Q 014472 271 A--HQ---SEVNCLAFNPFNEWILATGSTDKTVKLFDLRKISTALHTFDSH------------KEEVFQVGWNPKNETIL 333 (424)
Q Consensus 271 ~--~~---~~v~~i~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~------------~~~v~~~~~sp~~~~~l 333 (424)
. .. ..++-+.|. +| .+++..-.+..|.+.|.++ ++.+..+... ..-.+.|+|+|+++.++
T Consensus 164 V~~~g~~~~~lNELe~~-~G-~lyan~w~~~~I~vIDp~t-G~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lf 240 (262)
T 3nol_A 164 VTAHGEELPELNELEWV-DG-EIFANVWQTNKIVRIDPET-GKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLF 240 (262)
T ss_dssp CEETTEECCCEEEEEEE-TT-EEEEEETTSSEEEEECTTT-CBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEE
T ss_pred eccCCccccccceeEEE-CC-EEEEEEccCCeEEEEECCC-CcEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEE
Confidence 2 11 345567776 45 4666665788999999998 6666665432 23568999999988777
Q ss_pred EEEe
Q 014472 334 ASCC 337 (424)
Q Consensus 334 ~s~~ 337 (424)
++|-
T Consensus 241 VTGK 244 (262)
T 3nol_A 241 VTGK 244 (262)
T ss_dssp EEET
T ss_pred EECC
Confidence 7663
No 236
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=98.83 E-value=2.5e-05 Score=69.72 Aligned_cols=229 Identities=8% Similarity=-0.025 Sum_probs=141.0
Q ss_pred CCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCCeeeEEecCCCCceEEEEeCCCcEEEEeCCCCCCCCcccceeeeecC
Q 014472 147 SAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVH 226 (424)
Q Consensus 147 dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~ 226 (424)
...|+..++.. .. ...+......+.+++|.+.+..++++-...+.|..+++........ ....+...
T Consensus 9 ~~~I~~i~~~~----------~~-~~~~~~~~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~--~~~~~~~~ 75 (316)
T 1ijq_A 9 RHEVRKMTLDR----------SE-YTSLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSS--YDTVISRD 75 (316)
T ss_dssp BSSEEEEETTS----------CC-CEEEECSCSSEEEEEEETTTTEEEEEETTTTEEEEEEC----------CEEEECSS
T ss_pred CCeEEEEECCC----------cc-eEehhcCCCceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcc--cEEEEeCC
Confidence 35688888876 11 2223334456789999987765555656678999999875210000 01112212
Q ss_pred CcceeeEEeeCCCCcEEEEEeCCCeEEEEECCCCCCCCCeeEecccCCCeeEEEecCCCCeEEEEEeCC-CcEEEEECCC
Q 014472 227 EGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATGSTD-KTVKLFDLRK 305 (424)
Q Consensus 227 ~~~v~~i~~~~~~~~~~~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~l~~g~~d-g~i~iwd~~~ 305 (424)
-.....+++.+.+..++++-...+.|.++++..... .............++++|.+.+++++.... +.|..+++..
T Consensus 76 ~~~p~glavd~~~~~ly~~d~~~~~I~~~~~~g~~~---~~~~~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG 152 (316)
T 1ijq_A 76 IQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKR---KTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNG 152 (316)
T ss_dssp CSCCCEEEEETTTTEEEEEETTTTEEEEEETTSSSE---EEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTS
T ss_pred CCCcCEEEEeecCCeEEEEECCCCEEEEEeCCCCce---EEEEECCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCCC
Confidence 245678999887777887777889999999875331 111222335678999999877666665443 7888888864
Q ss_pred CCCcceee-cCCCCCEEEEEEcCCCCcEEEEEeCCCeEEEeeCCCCCcccCCCccCCCCCeeeEEEcCCCCCcceEEeCC
Q 014472 306 ISTALHTF-DSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPEDAEDGPPELLFIHGGHTSKISDFSWNP 384 (424)
Q Consensus 306 ~~~~~~~~-~~~~~~v~~~~~sp~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~ 384 (424)
.....+ ...-.....++++|++..++++-+..+.|..+|+..... +.+...........++++.
T Consensus 153 --~~~~~~~~~~~~~P~gla~d~~~~~lY~~D~~~~~I~~~d~dg~~~------------~~~~~~~~~~~~P~giav~- 217 (316)
T 1ijq_A 153 --VDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNR------------KTILEDEKRLAHPFSLAVF- 217 (316)
T ss_dssp --CCEEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC------------EEEEECTTTTSSEEEEEEE-
T ss_pred --CCeEEEEECCCCCceEEEEeccCCEEEEEECCCCeEEEEecCCCce------------EEEeecCCccCCcEEEEEE-
Confidence 222322 222356789999998776777767778999999864211 2222221222345677774
Q ss_pred CCCcEEEEEeCCCcEEEEecCCC
Q 014472 385 CEDWVISSVAEDNILQIWQMAEN 407 (424)
Q Consensus 385 ~~~~~l~s~~~d~~i~iw~~~~~ 407 (424)
.+ .++++-...+.|..++..++
T Consensus 218 ~~-~ly~~d~~~~~V~~~~~~~g 239 (316)
T 1ijq_A 218 ED-KVFWTDIINEAIFSANRLTG 239 (316)
T ss_dssp TT-EEEEEETTTTEEEEEETTTC
T ss_pred CC-EEEEEECCCCeEEEEeCCCC
Confidence 23 46777777788888887554
No 237
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.81 E-value=1.4e-05 Score=73.49 Aligned_cols=240 Identities=9% Similarity=-0.027 Sum_probs=148.5
Q ss_pred eeEEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCCeeeEEecCCCCceEEEEeCCCcEEEEe
Q 014472 128 VNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDDAQICLWD 207 (424)
Q Consensus 128 v~~i~~~p~~~~~latg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd 207 (424)
-.|.+..+ ...++++ ....|+..++.. .....+......+.+++|.+.+..++++-...+.|..++
T Consensus 79 ~~C~~~~~-~~~l~~~--~~~~I~~i~~~~-----------~~~~~~~~~~~~~~gl~~d~~~~~ly~~D~~~~~I~r~~ 144 (386)
T 3v65_B 79 RSCKALGP-EPVLLFA--NRIDIRQVLPHR-----------SEYTLLLNNLENAIALDFHHRRELVFWSDVTLDRILRAN 144 (386)
T ss_dssp SCEEECSS-CCEEEEE--CBSCEEEECTTS-----------CCCEEEECSCSCEEEEEEETTTTEEEEEETTTTEEEEEE
T ss_pred CeECCccc-cceeEee--cCccceeeccCC-----------CcEEEEecCCCccEEEEEecCCCeEEEEeCCCCcEEEEe
Confidence 34445445 3333333 345688888765 112233334456889999987665555555678899999
Q ss_pred CCCCCCCCcccceeeeecCCcceeeEEeeCCCCcEEEEEeCCCeEEEEECCCCCCCCCeeEecccCCCeeEEEecCCCCe
Q 014472 208 INAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEW 287 (424)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~ 287 (424)
+..... .............+++.+.+..++.+-...+.|.+.++..... ...+.........|+++|.+.+
T Consensus 145 ~~g~~~------~~~~~~~~~~p~glavd~~~g~lY~~d~~~~~I~~~~~dg~~~---~~l~~~~l~~P~giavdp~~g~ 215 (386)
T 3v65_B 145 LNGSNV------EEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHR---KVLLWQSLEKPRAIALHPMEGT 215 (386)
T ss_dssp TTSCCE------EEEECSSCSCCCCEEEETTTTEEEEEETTTTEEEECBTTSCSC---EEEECSSCSCEEEEEEETTTTE
T ss_pred cCCCCc------EEEEeCCCCCccEEEEEeCCCeEEEEcCCCCeEEEEeCCCCce---EEeecCCCCCCcEEEEEcCCCe
Confidence 875421 1111222235678899987777887777788899988875331 2222233356789999998887
Q ss_pred EEEEEeCC-CcEEEEECCCCCCcceeecCCCCCEEEEEEcCCCCcEEEEEeCCCeEEEeeCCCCCcccCCCccCCCCCee
Q 014472 288 ILATGSTD-KTVKLFDLRKISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPEDAEDGPPEL 366 (424)
Q Consensus 288 ~l~~g~~d-g~i~iwd~~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~ 366 (424)
++++-... +.|..+++.. ..........-.....|+|+|++..++++-+..+.|..+++..... ..
T Consensus 216 ly~td~~~~~~I~r~~~dG-~~~~~~~~~~~~~PnGlavd~~~~~lY~aD~~~~~I~~~d~dG~~~------------~~ 282 (386)
T 3v65_B 216 IYWTDWGNTPRIEASSMDG-SGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHR------------KA 282 (386)
T ss_dssp EEEEECSSSCEEEEEETTS-CSCEEEECSSCSCEEEEEEEGGGTEEEEEETTTTEEEEECTTSCSC------------EE
T ss_pred EEEeccCCCCEEEEEeCCC-CCcEEEEECCCCCeeeEEEeCCCCEEEEEECCCCEEEEEeCCCCee------------EE
Confidence 66665555 7888888874 2222222233446789999987777777777778899999864211 11
Q ss_pred eEEEcCCCCCcceEEeCCCCCcEEEEEeCCCcEEEEecCCC
Q 014472 367 LFIHGGHTSKISDFSWNPCEDWVISSVAEDNILQIWQMAEN 407 (424)
Q Consensus 367 ~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iw~~~~~ 407 (424)
+ .........++++ ..+ .++++-...+.|..++..++
T Consensus 283 ~--~~~~~~~P~giav-~~~-~ly~td~~~~~V~~~~~~~G 319 (386)
T 3v65_B 283 V--ISQGLPHPFAITV-FED-SLYWTDWHTKSINSANKFTG 319 (386)
T ss_dssp E--ECSSCSSEEEEEE-ETT-EEEEEETTTTEEEEEETTTC
T ss_pred E--EECCCCCceEEEE-ECC-EEEEeeCCCCeEEEEECCCC
Confidence 1 1222334567777 333 36777777788888874444
No 238
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=98.78 E-value=4.8e-07 Score=77.81 Aligned_cols=205 Identities=9% Similarity=0.001 Sum_probs=128.8
Q ss_pred eeeEEecCCCCceEEEEeC--CCcEEEEeCCCCCCCCcccceeeeecCCcceeeEEeeCCCCcEEEEEeCCCeEEEEECC
Q 014472 181 GYGLSWSKFKEGHLLSGSD--DAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLR 258 (424)
Q Consensus 181 v~~l~~~~~~~~~l~s~~~--dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~~s~~~dg~i~i~d~~ 258 (424)
..+|+|++++. ++++.+. ++.|.++|+.+++....+. +..+ .....+++. +..++++.-.++.+.++|..
T Consensus 23 ~~Gl~~~~dg~-Lyvstg~~~~s~v~~iD~~tg~v~~~i~----l~~~-~fgeGi~~~--g~~lyv~t~~~~~v~viD~~ 94 (266)
T 2iwa_A 23 TQGLVYAENDT-LFESTGLYGRSSVRQVALQTGKVENIHK----MDDS-YFGEGLTLL--NEKLYQVVWLKNIGFIYDRR 94 (266)
T ss_dssp EEEEEECSTTE-EEEEECSTTTCEEEEEETTTCCEEEEEE----CCTT-CCEEEEEEE--TTEEEEEETTCSEEEEEETT
T ss_pred cccEEEeCCCe-EEEECCCCCCCEEEEEECCCCCEEEEEe----cCCC-cceEEEEEe--CCEEEEEEecCCEEEEEECC
Confidence 57999998753 4444433 5799999998874322211 1111 122345554 55788787789999999999
Q ss_pred CCCCCCCeeEecccCCCeeEEEecCCCCeEEEEEeCCCcEEEEECCCCCCcceeecCC--C---CCEEEEEEcCCCCcEE
Q 014472 259 TPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATGSTDKTVKLFDLRKISTALHTFDSH--K---EEVFQVGWNPKNETIL 333 (424)
Q Consensus 259 ~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~--~---~~v~~~~~sp~~~~~l 333 (424)
+.+. +..+......-.. +++++..++++ ..++.|.++|..+ .+.+..+... . ..++.+.|. ++ .++
T Consensus 95 t~~v---~~~i~~g~~~g~g--lt~Dg~~l~vs-~gs~~l~viD~~t-~~v~~~I~Vg~~~~p~~~~nele~~-dg-~ly 165 (266)
T 2iwa_A 95 TLSN---IKNFTHQMKDGWG--LATDGKILYGS-DGTSILYEIDPHT-FKLIKKHNVKYNGHRVIRLNELEYI-NG-EVW 165 (266)
T ss_dssp TTEE---EEEEECCSSSCCE--EEECSSSEEEE-CSSSEEEEECTTT-CCEEEEEECEETTEECCCEEEEEEE-TT-EEE
T ss_pred CCcE---EEEEECCCCCeEE--EEECCCEEEEE-CCCCeEEEEECCC-CcEEEEEEECCCCcccccceeEEEE-CC-EEE
Confidence 8654 4444322112233 44567765654 4688999999988 4555555421 1 246788888 56 466
Q ss_pred EEEeCCCeEEEeeCCCCCcccCCCccCCCCCeeeEE--EcC--CCCCcceEEeCCCCCcEEEEEeCCCcEEEEecCCC
Q 014472 334 ASCCLGRRLMVWDLSRIDEEQTPEDAEDGPPELLFI--HGG--HTSKISDFSWNPCEDWVISSVAEDNILQIWQMAEN 407 (424)
Q Consensus 334 ~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~--~~~--h~~~v~~~~~~~~~~~~l~s~~~d~~i~iw~~~~~ 407 (424)
+....++.|.+.|..++.......... +... ... -....+.++|+|+++.+++++...+.+.+-++...
T Consensus 166 vn~~~~~~V~vID~~tg~V~~~I~~~g-----~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~~~v~~i~l~~~ 238 (266)
T 2iwa_A 166 ANIWQTDCIARISAKDGTLLGWILLPN-----LRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKLWPKLFEIKLHLV 238 (266)
T ss_dssp EEETTSSEEEEEETTTCCEEEEEECHH-----HHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETTCSEEEEEEEEEC
T ss_pred EecCCCCeEEEEECCCCcEEEEEECCC-----cccccccccccccCceEEEEEcCCCCEEEEECCCCCeEEEEEEecc
Confidence 666668899999999875322111000 0000 000 01346899999999889999989999999998765
No 239
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.77 E-value=8.9e-07 Score=75.24 Aligned_cols=191 Identities=13% Similarity=0.089 Sum_probs=126.1
Q ss_pred cEEEEEEeccCCce--eEEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCCee--eEEecCCC
Q 014472 115 KVQIIQQINHDGEV--NRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGY--GLSWSKFK 190 (424)
Q Consensus 115 ~~~~~~~~~h~~~v--~~i~~~p~~~~~latg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~--~l~~~~~~ 190 (424)
..++++.++|...- ..+.|+. ..+..+.+.+|.|+++|+.+ .+....+ -..... +++.. +
T Consensus 42 ~~~Vv~~~phd~~~ftqGL~~~~--~~Ly~stG~~g~v~~iD~~T----------gkv~~~~--l~~~~FgeGit~~--g 105 (268)
T 3nok_A 42 VAHIIREYPHATNAFTQGLVFHQ--GHFFESTGHQGTLRQLSLES----------AQPVWME--RLGNIFAEGLASD--G 105 (268)
T ss_dssp EEEEEEEEECCTTCCEEEEEEET--TEEEEEETTTTEEEECCSSC----------SSCSEEE--ECTTCCEEEEEEC--S
T ss_pred ceEEEEEEcCCCccccceEEEEC--CEEEEEcCCCCEEEEEECCC----------CcEEeEE--CCCCcceeEEEEe--C
Confidence 45788889987655 6888874 45788888889999999988 3334444 122333 35543 4
Q ss_pred CceEEEEeCCCcEEEEeCCCCCCCCcccceeeeecCCcceeeEEeeCCCCcEEEEEeCCCeEEEEECCCCCCCCCeeEec
Q 014472 191 EGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVV 270 (424)
Q Consensus 191 ~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~~s~~~dg~i~i~d~~~~~~~~~~~~~~ 270 (424)
..+.++.-.++.+.+||..+.+. +..+.. ...-+.++ +++..++++- .++.|.++|..+.+. +..+.
T Consensus 106 ~~Ly~ltw~~~~v~V~D~~Tl~~------~~ti~~-~~eGwGLt--~Dg~~L~vSd-Gs~~l~~iDp~T~~v---~~~I~ 172 (268)
T 3nok_A 106 ERLYQLTWTEGLLFTWSGMPPQR------ERTTRY-SGEGWGLC--YWNGKLVRSD-GGTMLTFHEPDGFAL---VGAVQ 172 (268)
T ss_dssp SCEEEEESSSCEEEEEETTTTEE------EEEEEC-SSCCCCEE--EETTEEEEEC-SSSEEEEECTTTCCE---EEEEE
T ss_pred CEEEEEEccCCEEEEEECCcCcE------EEEEeC-CCceeEEe--cCCCEEEEEC-CCCEEEEEcCCCCeE---EEEEE
Confidence 54566666789999999987633 333332 22224455 4566677554 588999999988664 33332
Q ss_pred c--cC---CCeeEEEecCCCCeEEEEEeCCCcEEEEECCCCCCcceeecCC-------------CCCEEEEEEcCCCCcE
Q 014472 271 A--HQ---SEVNCLAFNPFNEWILATGSTDKTVKLFDLRKISTALHTFDSH-------------KEEVFQVGWNPKNETI 332 (424)
Q Consensus 271 ~--~~---~~v~~i~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~-------------~~~v~~~~~sp~~~~~ 332 (424)
. +. ..++-+.|. +| .+++..-.+..|.+.|.++ ++.+..+... ..-.+.|+|+|+++.+
T Consensus 173 V~~~g~~v~~lNeLe~~-dG-~lyanvw~s~~I~vIDp~T-G~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rl 249 (268)
T 3nok_A 173 VKLRGQPVELINELECA-NG-VIYANIWHSSDVLEIDPAT-GTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRI 249 (268)
T ss_dssp CEETTEECCCEEEEEEE-TT-EEEEEETTCSEEEEECTTT-CBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCE
T ss_pred eCCCCcccccccccEEe-CC-EEEEEECCCCeEEEEeCCC-CcEEEEEECCCCcccccccccCcCCceEEEEEcCCCCEE
Confidence 2 22 245667777 45 4666665688999999998 6666555421 2367899999998888
Q ss_pred EEEEe
Q 014472 333 LASCC 337 (424)
Q Consensus 333 l~s~~ 337 (424)
++||-
T Consensus 250 fVTGK 254 (268)
T 3nok_A 250 FMTGK 254 (268)
T ss_dssp EEEET
T ss_pred EEeCC
Confidence 87764
No 240
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=98.77 E-value=3.4e-09 Score=97.33 Aligned_cols=180 Identities=12% Similarity=-0.006 Sum_probs=90.7
Q ss_pred eEEEEeCCCcEEEEeCCCCCCCCcccceeeeecCCcceeeEEeeCCCCcEEEEEeCCCeEEEEECCCCCCCCCeeEeccc
Q 014472 193 HLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAH 272 (424)
Q Consensus 193 ~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~~s~~~dg~i~i~d~~~~~~~~~~~~~~~~ 272 (424)
.+++++.||.|+.||..+++... .+.. +.+.+..+..++. ++++++.||.|+.||..+++. +..+..+
T Consensus 11 ~v~~gs~dg~v~a~d~~tG~~~W------~~~~--~~~~s~p~~~~g~-~~v~~s~dg~l~a~d~~tG~~---~w~~~~~ 78 (369)
T 2hz6_A 11 LLFVSTLDGSLHAVSKRTGSIKW------TLKE--DPVLQVPTHVEEP-AFLPDPNDGSLYTLGSKNNEG---LTKLPFT 78 (369)
T ss_dssp EEEEEETTSEEEEEETTTCCEEE------EEEC--CCSCCCC-----C-CEEECTTTCCEEEC-----CC---SEECSCC
T ss_pred EEEEEcCCCEEEEEECCCCCEEE------EecC--CCceecceEcCCC-EEEEeCCCCEEEEEECCCCce---eeeeecc
Confidence 79999999999999998885422 2222 3444444445554 555778999999999988764 2222111
Q ss_pred C-CCee-EEEecCCCCeEEEEEeCCCcEEEEECCCCCCcceeecCCCCCEEEEEEcCCCCcEEEEEeCCCeEEEeeCCCC
Q 014472 273 Q-SEVN-CLAFNPFNEWILATGSTDKTVKLFDLRKISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRI 350 (424)
Q Consensus 273 ~-~~v~-~i~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~s~~~dg~i~iwd~~~~ 350 (424)
. ..+. +..+. .+. .+++|+.++.|+.||.++ ++.+..+..+. ...++|.+. .+++++.|+.|..||..++
T Consensus 79 ~~~~~~~sp~~~-~~~-~v~~g~~dg~v~a~D~~t-G~~~w~~~~~~----~~~~~p~~~-~v~~~~~dg~v~a~d~~tG 150 (369)
T 2hz6_A 79 IPELVQASPCRS-SDG-ILYMGKKQDIWYVIDLLT-GEKQQTLSSAF----ADSLSPSTS-LLYLGRTEYTITMYDTKTR 150 (369)
T ss_dssp HHHHHTTCSCC-------CCCCEEEEEEEEECCC----------------------------EEEEEEEEEEECCCSSSS
T ss_pred CccccccCceEe-cCC-EEEEEeCCCEEEEEECCC-CcEEEEecCCC----cccccccCC-EEEEEecCCEEEEEECCCC
Confidence 1 0010 01111 233 477888899999999998 66666665443 234566664 6778888999999999886
Q ss_pred CcccCCCccCCCCCeeeEEEcCCCCCcceEEeCCCC---CcEEEEEeCCCcEEEEecCCCCC
Q 014472 351 DEEQTPEDAEDGPPELLFIHGGHTSKISDFSWNPCE---DWVISSVAEDNILQIWQMAENIY 409 (424)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~---~~~l~s~~~d~~i~iw~~~~~~~ 409 (424)
...-. +.... .....+..+. . .++.++.||.|+.||..++..
T Consensus 151 ~~~W~------------~~~~~----~~~~~~~~~~~~~~-~v~~~~~dg~v~a~d~~tG~~ 195 (369)
T 2hz6_A 151 ELRWN------------ATYFD----YAASLPEDDVDYKM-SHFVSNGDGLVVTVDSESGDV 195 (369)
T ss_dssp SCCCE------------EEEEE----ECCBCCCCCTTCCC-CEEEEETSCEEEEECTTTCCE
T ss_pred CEEEe------------Eeccc----ccCccccCCccccc-eEEEECCCCEEEEEECCCCcE
Confidence 53211 11111 1222233321 3 355678899999999987753
No 241
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=98.73 E-value=7.6e-05 Score=67.57 Aligned_cols=206 Identities=6% Similarity=-0.023 Sum_probs=134.7
Q ss_pred cCCceeEEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCCeeeEEecCCCCceEEEEeCCCcE
Q 014472 124 HDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDDAQI 203 (424)
Q Consensus 124 h~~~v~~i~~~p~~~~~latg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i 203 (424)
....+..++|.+.+..++.+-...+.|+.++.... .....+........++++.+.+..++++-...+.|
T Consensus 71 ~~~~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~----------~~~~~~~~~~~~p~glavd~~~g~ly~~d~~~~~I 140 (349)
T 3v64_C 71 NLENAIALDFHHRRELVFWSDVTLDRILRANLNGS----------NVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRI 140 (349)
T ss_dssp SCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSC----------SCEEEECSSCSCCCEEEEETTTTEEEEEETTTTEE
T ss_pred CCCceEEEEEeccccEEEEEeccCCceEEEecCCC----------CceEEEeCCCCCccEEEEecCCCeEEEEcCCCCeE
Confidence 34557899999877767777777889999998761 11222222234457888887666555666667899
Q ss_pred EEEeCCCCCCCCcccceeeeecCCcceeeEEeeCCCCcEEEEEeCC-CeEEEEECCCCCCCCCeeEecccCCCeeEEEec
Q 014472 204 CLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDD-QYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFN 282 (424)
Q Consensus 204 ~vwd~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~~s~~~d-g~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~ 282 (424)
.+.++..... .......-.....++++|.+..++.+-... +.|..+++..... .......-...+.|+++
T Consensus 141 ~~~~~dG~~~------~~l~~~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~dG~~~---~~~~~~~~~~PnGla~d 211 (349)
T 3v64_C 141 EVANLDGAHR------KVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGR---RIIADTHLFWPNGLTID 211 (349)
T ss_dssp EEEETTSCSC------EEEECTTCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSC---EESCCSSCSCEEEEEEE
T ss_pred EEEcCCCCce------EEEEeCCCCCcceEEEecCcCeEEEeccCCCCEEEEEeCCCCCc---EEEEECCCCCcceEEEe
Confidence 9999875421 111222335678999999887888776666 8899998875332 11111223457899999
Q ss_pred CCCCeEEEEEeCCCcEEEEECCCCCCcceeecCCCCCEEEEEEcCCCCcEEEEEeCCCeEEEeeCCCCC
Q 014472 283 PFNEWILATGSTDKTVKLFDLRKISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRID 351 (424)
Q Consensus 283 ~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~s~~~dg~i~iwd~~~~~ 351 (424)
|.+..+.++-...+.|..+|+.. ......+.........+++. .+ .++.+-...+.|..++..++.
T Consensus 212 ~~~~~lY~aD~~~~~I~~~~~dG-~~~~~~~~~~~~~P~giav~-~~-~ly~td~~~~~V~~~~~~~G~ 277 (349)
T 3v64_C 212 YAGRRMYWVDAKHHVIERANLDG-SHRKAVISQGLPHPFAITVF-ED-SLYWTDWHTKSINSANKFTGK 277 (349)
T ss_dssp TTTTEEEEEETTTTEEEEEETTS-CSCEEEECSSCSSEEEEEEE-TT-EEEEEETTTTEEEEEETTTCC
T ss_pred CCCCEEEEEECCCCEEEEEeCCC-CceEEEEeCCCCCceEEEEE-CC-EEEEecCCCCeEEEEEccCCC
Confidence 98887777766778899999875 32222333334566778883 33 567777777888888865554
No 242
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=98.72 E-value=9.9e-05 Score=68.14 Aligned_cols=230 Identities=9% Similarity=-0.024 Sum_probs=142.3
Q ss_pred CCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCCeeeEEecCCCCceEEEEeCCCcEEEEeCCCCCCCCcccceeeeecC
Q 014472 147 SAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVH 226 (424)
Q Consensus 147 dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~ 226 (424)
...|+..++.. .....+......+.+|+|.+.+..++.+-...+.|..+++....... .........
T Consensus 91 ~~~I~~i~l~~-----------~~~~~~~~~~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~--~~~~~~~~~ 157 (400)
T 3p5b_L 91 RHEVRKMTLDR-----------SEYTSLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVS--SYDTVISRD 157 (400)
T ss_dssp TTEEEEECTTS-----------CSCEEEECSCSCEEEEEEETTTTEEEEEETTTTEEEEEEC------C--CCEEEECSS
T ss_pred cceeEEEccCC-----------cceeEeccccCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCC--cceEEEeCC
Confidence 46888888876 11233344556788999998766455555567889999986532100 011122223
Q ss_pred CcceeeEEeeCCCCcEEEEEeCCCeEEEEECCCCCCCCCeeEecccCCCeeEEEecCCCCeEEEEEeC-CCcEEEEECCC
Q 014472 227 EGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATGST-DKTVKLFDLRK 305 (424)
Q Consensus 227 ~~~v~~i~~~~~~~~~~~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~l~~g~~-dg~i~iwd~~~ 305 (424)
......+++.+.+..++.+-...+.|.+.++..... ...+.........|+++|.+.+++++-.. .+.|...++..
T Consensus 158 ~~~p~glavD~~~~~lY~~d~~~~~I~~~~~~g~~~---~~l~~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG 234 (400)
T 3p5b_L 158 IQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKR---KTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNG 234 (400)
T ss_dssp CSCEEEEEEETTTTEEEEEETTTTEEEEECTTTCSE---EEEEECSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTS
T ss_pred CCCcccEEEEecCCceEEEECCCCeEEEEeCCCCce---EEEEeCCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCC
Confidence 356788999987777887877889999999875431 22222234457899999987766665433 47888888874
Q ss_pred CCCcceeecCCCCCEEEEEEcCCCCcEEEEEeCCCeEEEeeCCCCCcccCCCccCCCCCeeeEEEcCCCCCcceEEeCCC
Q 014472 306 ISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPEDAEDGPPELLFIHGGHTSKISDFSWNPC 385 (424)
Q Consensus 306 ~~~~~~~~~~~~~~v~~~~~sp~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~ 385 (424)
..........-.....|++++.+..++++-...+.|..+|+..... ..+....+......++++.
T Consensus 235 -~~~~~~~~~~l~~P~glavd~~~~~lY~aD~~~~~I~~~d~dG~~~------------~~~~~~~~~l~~P~gl~v~-- 299 (400)
T 3p5b_L 235 -VDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNR------------KTILEDEKRLAHPFSLAVF-- 299 (400)
T ss_dssp -CSCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCC------------EEEEECSSTTSSEEEEEEE--
T ss_pred -CccEEEEECCCCceEEEEEEeCCCEEEEEECCCCEEEEEeCCCCcc------------EEEEeCCCCCCCCEEEEEe--
Confidence 2222222333357899999998876666666678899999864221 2222211222334566663
Q ss_pred CCcEEEEEeCCCcEEEEecCCC
Q 014472 386 EDWVISSVAEDNILQIWQMAEN 407 (424)
Q Consensus 386 ~~~~l~s~~~d~~i~iw~~~~~ 407 (424)
+..++.+-...+.|..++..++
T Consensus 300 ~~~lywtd~~~~~V~~~~~~~G 321 (400)
T 3p5b_L 300 EDKVFWTDIINEAIFSANRLTG 321 (400)
T ss_dssp TTEEEEEESSSCSEEEEESSSC
T ss_pred CCEEEEecCCCCeEEEEEcCCC
Confidence 3346777777788888885554
No 243
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.71 E-value=3.9e-05 Score=70.58 Aligned_cols=207 Identities=6% Similarity=-0.021 Sum_probs=134.9
Q ss_pred cCCceeEEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCCeeeEEecCCCCceEEEEeCCCcE
Q 014472 124 HDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDDAQI 203 (424)
Q Consensus 124 h~~~v~~i~~~p~~~~~latg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i 203 (424)
....+..++|.+.+..++.+-...+.|+.++... ......+........+|++.+.+..++++-...+.|
T Consensus 114 ~~~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g----------~~~~~~~~~~~~~p~glavd~~~g~lY~~d~~~~~I 183 (386)
T 3v65_B 114 NLENAIALDFHHRRELVFWSDVTLDRILRANLNG----------SNVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRI 183 (386)
T ss_dssp SCSCEEEEEEETTTTEEEEEETTTTEEEEEETTS----------CCEEEEECSSCSCCCCEEEETTTTEEEEEETTTTEE
T ss_pred CCCccEEEEEecCCCeEEEEeCCCCcEEEEecCC----------CCcEEEEeCCCCCccEEEEEeCCCeEEEEcCCCCeE
Confidence 3456788999987776777777788999999876 111122222233456788887666555666667788
Q ss_pred EEEeCCCCCCCCcccceeeeecCCcceeeEEeeCCCCcEEEEEeCC-CeEEEEECCCCCCCCCeeEecccCCCeeEEEec
Q 014472 204 CLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDD-QYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFN 282 (424)
Q Consensus 204 ~vwd~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~~s~~~d-g~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~ 282 (424)
.+.++..... .......-.....++++|.+..++.+-... +.|..+++..... .......-...+.|+++
T Consensus 184 ~~~~~dg~~~------~~l~~~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~---~~~~~~~~~~PnGlavd 254 (386)
T 3v65_B 184 EVANLDGAHR------KVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGR---RIIADTHLFWPNGLTID 254 (386)
T ss_dssp EECBTTSCSC------EEEECSSCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSC---EEEECSSCSCEEEEEEE
T ss_pred EEEeCCCCce------EEeecCCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCCCc---EEEEECCCCCeeeEEEe
Confidence 8888864321 111222335678999999888888776666 7899998875432 22222223457899999
Q ss_pred CCCCeEEEEEeCCCcEEEEECCCCCCcceeecCCCCCEEEEEEcCCCCcEEEEEeCCCeEEEeeCCCCCc
Q 014472 283 PFNEWILATGSTDKTVKLFDLRKISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDE 352 (424)
Q Consensus 283 ~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~s~~~dg~i~iwd~~~~~~ 352 (424)
|.+..++++-...+.|..+|+.. ......+.........+++. .+ .++.+....+.|..++..++..
T Consensus 255 ~~~~~lY~aD~~~~~I~~~d~dG-~~~~~~~~~~~~~P~giav~-~~-~ly~td~~~~~V~~~~~~~G~~ 321 (386)
T 3v65_B 255 YAGRRMYWVDAKHHVIERANLDG-SHRKAVISQGLPHPFAITVF-ED-SLYWTDWHTKSINSANKFTGKN 321 (386)
T ss_dssp GGGTEEEEEETTTTEEEEECTTS-CSCEEEECSSCSSEEEEEEE-TT-EEEEEETTTTEEEEEETTTCCS
T ss_pred CCCCEEEEEECCCCEEEEEeCCC-CeeEEEEECCCCCceEEEEE-CC-EEEEeeCCCCeEEEEECCCCcc
Confidence 88887777766778899999875 33223333334566788883 33 5677777788898888655543
No 244
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.71 E-value=9.5e-06 Score=68.35 Aligned_cols=193 Identities=12% Similarity=0.104 Sum_probs=123.7
Q ss_pred CcEEEEEEeccCCc--eeEEEecCCCCcEEEEEecC--CeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCCe--eeEEec
Q 014472 114 GKVQIIQQINHDGE--VNRARYMPQNPFLIATKTVS--AEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEG--YGLSWS 187 (424)
Q Consensus 114 ~~~~~~~~~~h~~~--v~~i~~~p~~~~~latg~~d--g~v~iwd~~~~~~~~~~~~~~~~~~~~~~h~~~v--~~l~~~ 187 (424)
-..++++.++|... ...+.|++ + .++.+.+.. +.|+.+|+.+ .+....+.-. ... -+++..
T Consensus 7 ~~~~v~~~~phd~~~ftqGL~~~~-~-~LyestG~~g~S~v~~vD~~t----------gkv~~~~~l~-~~~fgeGi~~~ 73 (243)
T 3mbr_X 7 QGYRVVKRYPHDTTAFTEGLFYLR-G-HLYESTGETGRSSVRKVDLET----------GRILQRAEVP-PPYFGAGIVAW 73 (243)
T ss_dssp CCEEEEEEEECCTTCCEEEEEEET-T-EEEEEECCTTSCEEEEEETTT----------CCEEEEEECC-TTCCEEEEEEE
T ss_pred cceEEEEEcCCCCccccccEEEEC-C-EEEEECCCCCCceEEEEECCC----------CCEEEEEeCC-CCcceeEEEEe
Confidence 45788999999854 55899987 4 466666655 4899999987 3333333322 222 234443
Q ss_pred CCCCceEEEEeCCCcEEEEeCCCCCCCCcccceeeeecCCcceeeEEeeCCCCcEEEEEeCCCeEEEEECCCCCCCCCee
Q 014472 188 KFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQ 267 (424)
Q Consensus 188 ~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~~s~~~dg~i~i~d~~~~~~~~~~~ 267 (424)
+..+....-.++.+.++|..+.+ .+..+... ..-+.++ +++..++++- .++.|.++|..+.+. +.
T Consensus 74 --~~~ly~ltw~~~~v~v~D~~tl~------~~~ti~~~-~~Gwglt--~dg~~L~vSd-gs~~l~~iDp~t~~~---~~ 138 (243)
T 3mbr_X 74 --RDRLIQLTWRNHEGFVYDLATLT------PRARFRYP-GEGWALT--SDDSHLYMSD-GTAVIRKLDPDTLQQ---VG 138 (243)
T ss_dssp --TTEEEEEESSSSEEEEEETTTTE------EEEEEECS-SCCCEEE--ECSSCEEEEC-SSSEEEEECTTTCCE---EE
T ss_pred --CCEEEEEEeeCCEEEEEECCcCc------EEEEEeCC-CCceEEe--eCCCEEEEEC-CCCeEEEEeCCCCeE---EE
Confidence 45455666678999999997763 33333322 2223444 5677777664 588899999998664 33
Q ss_pred Eecc--cC---CCeeEEEecCCCCeEEEEEeCCCcEEEEECCCCCCcceeecC-------------CCCCEEEEEEcCCC
Q 014472 268 SVVA--HQ---SEVNCLAFNPFNEWILATGSTDKTVKLFDLRKISTALHTFDS-------------HKEEVFQVGWNPKN 329 (424)
Q Consensus 268 ~~~~--~~---~~v~~i~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~-------------~~~~v~~~~~sp~~ 329 (424)
.+.. +. ..++-+.|. +|. +++..-.+..|.+.|.++ ++.+..+.. ...-.+.|+++|.+
T Consensus 139 ~I~V~~~g~~~~~lNeLe~~-~G~-lyanvw~s~~I~vIDp~t-G~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~ 215 (243)
T 3mbr_X 139 SIKVTAGGRPLDNLNELEWV-NGE-LLANVWLTSRIARIDPAS-GKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEH 215 (243)
T ss_dssp EEECEETTEECCCEEEEEEE-TTE-EEEEETTTTEEEEECTTT-CBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTT
T ss_pred EEEEccCCcccccceeeEEe-CCE-EEEEECCCCeEEEEECCC-CCEEEEEECCcCccccccccCCcCCceEEEEEcCCC
Confidence 3322 11 345667766 354 666665678999999998 666555542 12356899999998
Q ss_pred CcEEEEEe
Q 014472 330 ETILASCC 337 (424)
Q Consensus 330 ~~~l~s~~ 337 (424)
+.++++|-
T Consensus 216 ~~lfVTGK 223 (243)
T 3mbr_X 216 DRLFVTGK 223 (243)
T ss_dssp TEEEEEET
T ss_pred CEEEEECC
Confidence 87777764
No 245
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=98.65 E-value=7.1e-05 Score=66.42 Aligned_cols=243 Identities=7% Similarity=0.058 Sum_probs=142.2
Q ss_pred CCcEEEEEEeccCCceeEEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCCeeeEEecCCCCc
Q 014472 113 NGKVQIIQQINHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEG 192 (424)
Q Consensus 113 ~~~~~~~~~~~h~~~v~~i~~~p~~~~~latg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~ 192 (424)
....+++..+.-......++|.+++. ++++...++.|..|+... ... ........+.++++.+++.
T Consensus 19 ~~~~~~~~~~p~~~~pegia~~~~g~-lyv~d~~~~~I~~~d~~g-----------~~~-~~~~~~~~p~gia~~~dG~- 84 (306)
T 2p4o_A 19 LAPAKIITSFPVNTFLENLASAPDGT-IFVTNHEVGEIVSITPDG-----------NQQ-IHATVEGKVSGLAFTSNGD- 84 (306)
T ss_dssp CCCEEEEEEECTTCCEEEEEECTTSC-EEEEETTTTEEEEECTTC-----------CEE-EEEECSSEEEEEEECTTSC-
T ss_pred CCCceEeEeCCCCCCcceEEECCCCC-EEEEeCCCCeEEEECCCC-----------ceE-EEEeCCCCceeEEEcCCCc-
Confidence 34566777776667788999999876 777766788999998764 111 1222335688999999887
Q ss_pred eEEEEeC-CC-cEEEEeCCCCCCCCcccceeeeecCCcceeeEEeeCCCCcEEEEEeCCCeEEEEECCCCCCCCCeeE--
Q 014472 193 HLLSGSD-DA-QICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQS-- 268 (424)
Q Consensus 193 ~l~s~~~-dg-~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~~s~~~dg~i~i~d~~~~~~~~~~~~-- 268 (424)
++++... ++ .|..++..++.. ..+.... .......++..+. ..++++-..++.|.++|...+.. .+..
T Consensus 85 l~vad~~~~~~~v~~~d~~~g~~----~~~~~~~-~~~~~~g~~~~~~-~~~~v~d~~~g~i~~~d~~~~~~--~v~~~~ 156 (306)
T 2p4o_A 85 LVATGWNADSIPVVSLVKSDGTV----ETLLTLP-DAIFLNGITPLSD-TQYLTADSYRGAIWLIDVVQPSG--SIWLEH 156 (306)
T ss_dssp EEEEEECTTSCEEEEEECTTSCE----EEEEECT-TCSCEEEEEESSS-SEEEEEETTTTEEEEEETTTTEE--EEEEEC
T ss_pred EEEEeccCCcceEEEEcCCCCeE----EEEEeCC-CccccCcccccCC-CcEEEEECCCCeEEEEeCCCCcE--eEEEEC
Confidence 5554433 22 466667655421 1111111 1122344444443 34565555688999999765310 0100
Q ss_pred -------ecccCCCeeEEEecCCCCeEEEEEeCCCcEEEEECCCCCCc--ceeecCCCCCEEEEEEcCCCCcEEEEEeCC
Q 014472 269 -------VVAHQSEVNCLAFNPFNEWILATGSTDKTVKLFDLRKISTA--LHTFDSHKEEVFQVGWNPKNETILASCCLG 339 (424)
Q Consensus 269 -------~~~~~~~v~~i~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~--~~~~~~~~~~v~~~~~sp~~~~~l~s~~~d 339 (424)
....-...+.| +|++.+++++-...+.|..||+...+.. ...+.. ......++++++|. ++++....
T Consensus 157 ~~~~~~~~~~~~~~pngi--s~dg~~lyv~d~~~~~I~~~~~~~~g~~~~~~~~~~-~~~P~gi~vd~dG~-l~va~~~~ 232 (306)
T 2p4o_A 157 PMLARSNSESVFPAANGL--KRFGNFLYVSNTEKMLLLRIPVDSTDKPGEPEIFVE-QTNIDDFAFDVEGN-LYGATHIY 232 (306)
T ss_dssp GGGSCSSTTCCSCSEEEE--EEETTEEEEEETTTTEEEEEEBCTTSCBCCCEEEEE-SCCCSSEEEBTTCC-EEEECBTT
T ss_pred CccccccccCCCCcCCCc--CcCCCEEEEEeCCCCEEEEEEeCCCCCCCccEEEec-cCCCCCeEECCCCC-EEEEeCCC
Confidence 00111234555 7778777777777889999998742211 111111 13456789999985 66666667
Q ss_pred CeEEEeeCCCCCcccCCCccCCCCCeeeEEEcCCCCCcceEEeC---CCCCcEEEEEe
Q 014472 340 RRLMVWDLSRIDEEQTPEDAEDGPPELLFIHGGHTSKISDFSWN---PCEDWVISSVA 394 (424)
Q Consensus 340 g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~---~~~~~~l~s~~ 394 (424)
+.|.+++.. +.. ..+..........++++|. |++..++++.+
T Consensus 233 ~~V~~~~~~-G~~------------~~~~~~~~~~~~p~~~a~~g~~~d~~~LyVt~~ 277 (306)
T 2p4o_A 233 NSVVRIAPD-RST------------TIIAQAEQGVIGSTAVAFGQTEGDCTAIYVVTN 277 (306)
T ss_dssp CCEEEECTT-CCE------------EEEECGGGTCTTEEEEEECCSTTTTTEEEEEEC
T ss_pred CeEEEECCC-CCE------------EEEeecccccCCceEEEEecccCCCCEEEEECC
Confidence 889999864 211 1111122222457899998 88776666654
No 246
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=98.63 E-value=1.4e-06 Score=86.39 Aligned_cols=235 Identities=9% Similarity=0.078 Sum_probs=137.5
Q ss_pred EEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEecC-C----CCeee-EEecCCCCceEEEEeC------CCcEEEEe
Q 014472 140 LIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGH-S----TEGYG-LSWSKFKEGHLLSGSD------DAQICLWD 207 (424)
Q Consensus 140 ~latg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~h-~----~~v~~-l~~~~~~~~~l~s~~~------dg~i~vwd 207 (424)
.|.+++.++.|..+|..+ .+....+..+ . ..+.+ ... .+. .+++++. +|.|+.+|
T Consensus 130 ~v~v~~~dg~l~alD~~t----------G~~~W~~~~~~~~~~~~~~~~~p~v--~~~-~v~v~~~~~~~~~~g~v~a~D 196 (677)
T 1kb0_A 130 KVYVGAWDGRLIALDAAT----------GKEVWHQNTFEGQKGSLTITGAPRV--FKG-KVIIGNGGAEYGVRGYITAYD 196 (677)
T ss_dssp EEEEECTTSEEEEEETTT----------CCEEEEEETTTTCCSSCBCCSCCEE--ETT-EEEECCBCTTTCCBCEEEEEE
T ss_pred EEEEEcCCCEEEEEECCC----------CCEEeeecCCcCcCcCcccccCcEE--ECC-EEEEEecccccCCCCEEEEEE
Confidence 566778899999999877 3444444433 1 11111 111 133 4555543 68999999
Q ss_pred CCCCCCCCcccceeee-----------------e---------cCCcceeeEEeeCCCCcEEEEEeCCC-----------
Q 014472 208 INAAPKNKSLEAMQIF-----------------K---------VHEGVVEDVAWHLRHEYLFGSVGDDQ----------- 250 (424)
Q Consensus 208 ~~~~~~~~~~~~~~~~-----------------~---------~~~~~v~~i~~~~~~~~~~~s~~~dg----------- 250 (424)
..+++....+...... . +.......++++|++..++ .+..++
T Consensus 197 ~~tG~~~W~~~~~~~~~~~~~~~~~~~~g~~~w~~~g~~~~~~~g~~~w~~~~~d~~~~~vy-~~~~~~~~w~~~~~~~~ 275 (677)
T 1kb0_A 197 AETGERKWRWFSVPGDPSKPFEDESMKRAARTWDPSGKWWEAGGGGTMWDSMTFDAELNTMY-VGTGNGSPWSHKVRSPK 275 (677)
T ss_dssp TTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTSCGGGCHHHHCEECCCCSCEEEETTTTEEE-EECCCEESSCHHHHSTT
T ss_pred CCCCcEEEEeccCCCCccccccccccccccccccccCceeEeCCCcccccceeEcCCCCEEE-EECCCCccccCCCCCcc
Confidence 9988643222110000 0 1111224578888877554 555543
Q ss_pred --------eEEEEECCCCCCCCCeeEecc--cC-------CCeeEEEecCCCC--eEEEEEeCCCcEEEEECCCCCCcce
Q 014472 251 --------YLLIWDLRTPSVSKPVQSVVA--HQ-------SEVNCLAFNPFNE--WILATGSTDKTVKLFDLRKISTALH 311 (424)
Q Consensus 251 --------~i~i~d~~~~~~~~~~~~~~~--~~-------~~v~~i~~~~~~~--~~l~~g~~dg~i~iwd~~~~~~~~~ 311 (424)
.|..+|.++++. +-.+.. |. .....+....+|+ .+++.++.+|.++++|.++ ++++.
T Consensus 276 ~gd~~~~~sv~AlD~~TG~~---~W~~~~~~~d~wd~~~~~~p~l~~~~~dG~~~~~l~~~~~~G~l~~lD~~t-G~~l~ 351 (677)
T 1kb0_A 276 GGDNLYLASIVALDPDTGKY---KWHYQETPGDNWDYTSTQPMILADIKIAGKPRKVILHAPKNGFFFVLDRTN-GKFIS 351 (677)
T ss_dssp CCCCTTTTEEEEECTTTCCE---EEEEESSTTCCSCCCCCSCCEEEEEEETTEEEEEEEECCTTSEEEEEETTT-CCEEE
T ss_pred CCCCeeeEEEEEEECCCCCE---EEEEecCCCcccccccCCCcEEEecccCCcEeeEEEEECCCCEEEEEECCC-CCEec
Confidence 599999998774 222221 21 1222233333552 4688999999999999988 56554
Q ss_pred eecCCC-----------CCE------------------------EEEEEcCCCCcEEEEEeCC-----------------
Q 014472 312 TFDSHK-----------EEV------------------------FQVGWNPKNETILASCCLG----------------- 339 (424)
Q Consensus 312 ~~~~~~-----------~~v------------------------~~~~~sp~~~~~l~s~~~d----------------- 339 (424)
.+.... .++ ..++++|+.. ++++...+
T Consensus 352 ~~~~~~~~~~~~~d~~g~~~~~~~~~~~~~~~~~~P~~~G~~~w~~~a~dp~~~-~~yv~~~~~~~~~~~~~~~~~g~~~ 430 (677)
T 1kb0_A 352 AKNFVPVNWASGYDKHGKPIGIAAARDGSKPQDAVPGPYGAHNWHPMSFNPQTG-LVYLPAQNVPVNLMDDKKWEFNQAG 430 (677)
T ss_dssp EEESSCCSSEEEECTTSCEEECGGGGCTTSCEECSSCTTCSSCSSCCEEETTTT-EEEEEEEECCCEEEECTTCCTTCCC
T ss_pred cccccccCcccccCCCCceeeccccCcCCCccEECcCcccccCCCCceEcCCCC-EEEEeChhcceeeeccccccccccc
Confidence 443211 011 1568888876 45554322
Q ss_pred --------------------------CeEEEeeCCCCCcccCCCccCCCCCeeeEEEcCCCCCcceEEeCCCCCcEEEEE
Q 014472 340 --------------------------RRLMVWDLSRIDEEQTPEDAEDGPPELLFIHGGHTSKISDFSWNPCEDWVISSV 393 (424)
Q Consensus 340 --------------------------g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~ 393 (424)
|.|..||+.++ +.+..+. +...+.+..+...+. +++.+
T Consensus 431 ~~~~~~~~~~~~g~~~~~~~~~~~~~g~l~A~D~~tG--------------~~~W~~~-~~~~~~~g~~~~~g~-~v~~g 494 (677)
T 1kb0_A 431 PGKPQSGTGWNTAKFFNAEPPKSKPFGRLLAWDPVAQ--------------KAAWSVE-HVSPWNGGTLTTAGN-VVFQG 494 (677)
T ss_dssp TTSTTGGGTCCCCEEECSSCCCSCCEEEEEEEETTTT--------------EEEEEEE-ESSSCCCCEEEETTT-EEEEE
T ss_pred ccccccccccccccccccccCCCCCccEEEEEeCCCC--------------cEEeecC-CCCCCcCcceEeCCC-EEEEE
Confidence 66888888775 3333332 223455556666777 67778
Q ss_pred eCCCcEEEEecCCCCC
Q 014472 394 AEDNILQIWQMAENIY 409 (424)
Q Consensus 394 ~~d~~i~iw~~~~~~~ 409 (424)
+.||.+++||..++..
T Consensus 495 ~~dg~l~a~D~~tG~~ 510 (677)
T 1kb0_A 495 TADGRLVAYHAATGEK 510 (677)
T ss_dssp CTTSEEEEEETTTCCE
T ss_pred CCCCcEEEEECCCCce
Confidence 9999999999998854
No 247
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=98.62 E-value=3.8e-06 Score=75.31 Aligned_cols=175 Identities=11% Similarity=0.028 Sum_probs=113.3
Q ss_pred eEEEEeCCCcEEEEeCCCCCCCCcccceeeeecCCcceeeEEeeCCCCcEEEEEeCCCeEEEEECCCCCCCCCeeEeccc
Q 014472 193 HLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAH 272 (424)
Q Consensus 193 ~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~~s~~~dg~i~i~d~~~~~~~~~~~~~~~~ 272 (424)
.|..++.++.|..+|.. +.. ..........+.++...+++. ++ .++.++.|..+|.. +.. +......
T Consensus 109 ~l~v~t~~~~l~~~d~~-g~~------~~~~~~~~~~~~~~~~~~~g~-l~-vgt~~~~l~~~d~~-g~~---~~~~~~~ 175 (330)
T 3hxj_A 109 ILYVTSMDGHLYAINTD-GTE------KWRFKTKKAIYATPIVSEDGT-IY-VGSNDNYLYAINPD-GTE---KWRFKTN 175 (330)
T ss_dssp EEEEECTTSEEEEECTT-SCE------EEEEECSSCCCSCCEECTTSC-EE-EECTTSEEEEECTT-SCE---EEEEECS
T ss_pred EEEEEecCCEEEEEcCC-CCE------EEEEcCCCceeeeeEEcCCCE-EE-EEcCCCEEEEECCC-CCE---eEEEecC
Confidence 58888889999999987 421 222223344566667766664 44 67778999999988 442 3334444
Q ss_pred CCCeeEEEecCCCCeEEEEEeCCCcEEEEECCCCCCcceeecCCCCCEEEEEEcCCCCcEEEEEeCCCeEEEeeCCCCCc
Q 014472 273 QSEVNCLAFNPFNEWILATGSTDKTVKLFDLRKISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDE 352 (424)
Q Consensus 273 ~~~v~~i~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~s~~~dg~i~iwd~~~~~~ 352 (424)
...+.++...+++. +..++ +.|..+| .+ +..+..+......+.++...+++. |..++.++.|..++...
T Consensus 176 ~~~~~~~~~d~~g~--l~v~t--~~l~~~d-~~-g~~~~~~~~~~~~~~~~~~~~~g~--l~v~t~~~gl~~~~~~g--- 244 (330)
T 3hxj_A 176 DAITSAASIGKDGT--IYFGS--DKVYAIN-PD-GTEKWNFYAGYWTVTRPAISEDGT--IYVTSLDGHLYAINPDG--- 244 (330)
T ss_dssp SCCCSCCEECTTCC--EEEES--SSEEEEC-TT-SCEEEEECCSSCCCSCCEECTTSC--EEEEETTTEEEEECTTS---
T ss_pred CCceeeeEEcCCCE--EEEEe--CEEEEEC-CC-CcEEEEEccCCcceeceEECCCCe--EEEEcCCCeEEEECCCC---
Confidence 55677788877775 44555 7899999 54 455555555556788888988874 55667777788887432
Q ss_pred ccCCCccCCCCCeeeEEEcCCCCCcceEEeCCCCCcEEEEEeCCCcEEEEecC
Q 014472 353 EQTPEDAEDGPPELLFIHGGHTSKISDFSWNPCEDWVISSVAEDNILQIWQMA 405 (424)
Q Consensus 353 ~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iw~~~ 405 (424)
..+.........+..+...+++. |..++.+|.|..++..
T Consensus 245 ------------~~~~~~~~~~~~~~~~~~~~~g~--l~v~t~~ggl~~~d~~ 283 (330)
T 3hxj_A 245 ------------TEKWRFKTGKRIESSPVIGNTDT--IYFGSYDGHLYAINPD 283 (330)
T ss_dssp ------------CEEEEEECSSCCCSCCEECTTSC--EEEECTTCEEEEECTT
T ss_pred ------------CEeEEeeCCCCccccceEcCCCe--EEEecCCCCEEEECCC
Confidence 22233333333445566666776 4456677788888863
No 248
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=98.62 E-value=5e-05 Score=64.88 Aligned_cols=205 Identities=10% Similarity=0.090 Sum_probs=130.4
Q ss_pred cCCceeEEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEe-cCCCCeeeEEecCCCCceEEEEeCCCc
Q 014472 124 HDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLR-GHSTEGYGLSWSKFKEGHLLSGSDDAQ 202 (424)
Q Consensus 124 h~~~v~~i~~~p~~~~~latg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~-~h~~~v~~l~~~~~~~~~l~s~~~dg~ 202 (424)
-.+.+..++|+|++..++|+...++.|...|... .....+. +-....-+|++.+++. ++++.-.++.
T Consensus 25 ~~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~g-----------~v~~~i~l~g~~D~EGIa~~~~g~-~~vs~E~~~~ 92 (255)
T 3qqz_A 25 ITNNISSLTWSAQSNTLFSTINKPAAIVEMTTNG-----------DLIRTIPLDFVKDLETIEYIGDNQ-FVISDERDYA 92 (255)
T ss_dssp CCSCEEEEEEETTTTEEEEEEETTEEEEEEETTC-----------CEEEEEECSSCSSEEEEEECSTTE-EEEEETTTTE
T ss_pred cccCcceeEEeCCCCEEEEEECCCCeEEEEeCCC-----------CEEEEEecCCCCChHHeEEeCCCE-EEEEECCCCc
Confidence 3468999999998777888888888988888764 2233332 1224577888887664 5565556788
Q ss_pred EEEEeCCCCCCCCccccee-ee--ecCCcceeeEEeeCCCCcEEEEEeCCC-eEEEEECCCCCCCCCeeEe-------cc
Q 014472 203 ICLWDINAAPKNKSLEAMQ-IF--KVHEGVVEDVAWHLRHEYLFGSVGDDQ-YLLIWDLRTPSVSKPVQSV-------VA 271 (424)
Q Consensus 203 i~vwd~~~~~~~~~~~~~~-~~--~~~~~~v~~i~~~~~~~~~~~s~~~dg-~i~i~d~~~~~~~~~~~~~-------~~ 271 (424)
+.++++............. .+ .........++|+|.+..++++.-.+. .|..|+ .......+... ..
T Consensus 93 l~~~~v~~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~--g~~~~~~l~i~~~~~~~~~~ 170 (255)
T 3qqz_A 93 IYVISLTPNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVN--GLLSSNELHISKDKALQRQF 170 (255)
T ss_dssp EEEEEECTTCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEE--STTCSSCCEEEECHHHHHTC
T ss_pred EEEEEcCCCCeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEEc--ccccCCceeeecchhhcccc
Confidence 9999887654211111111 01 123455789999999887876555444 455555 10000112222 11
Q ss_pred cCCCeeEEEecCCCCeEEEEEeCCCcEEEEECCCCCCcceeecCCC---------CCEEEEEEcCCCCcEEEEEeCCCeE
Q 014472 272 HQSEVNCLAFNPFNEWILATGSTDKTVKLFDLRKISTALHTFDSHK---------EEVFQVGWNPKNETILASCCLGRRL 342 (424)
Q Consensus 272 ~~~~v~~i~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~---------~~v~~~~~sp~~~~~l~s~~~dg~i 342 (424)
+...+.+++++|...++++....++.+.++|... +++..+.... ...-.|+|.++|. +++ .+..+.+
T Consensus 171 ~~~d~S~l~~dp~tg~lliLS~~s~~L~~~d~~g--~~~~~~~L~~g~~~l~~~~~qpEGia~d~~G~-lyI-vsE~n~~ 246 (255)
T 3qqz_A 171 TLDDVSGAEFNQQKNTLLVLSHESRALQEVTLVG--EVIGEMSLTKGSRGLSHNIKQAEGVAMDASGN-IYI-VSEPNRF 246 (255)
T ss_dssp CSSCCCEEEEETTTTEEEEEETTTTEEEEECTTC--CEEEEEECSTTGGGCSSCCCSEEEEEECTTCC-EEE-EETTTEE
T ss_pred ccCCceeEEEcCCCCeEEEEECCCCeEEEEcCCC--CEEEEEEcCCccCCcccccCCCCeeEECCCCC-EEE-EcCCceE
Confidence 2346789999999888888888889999999774 4555444322 2668999999995 444 4666655
Q ss_pred EEee
Q 014472 343 MVWD 346 (424)
Q Consensus 343 ~iwd 346 (424)
..|.
T Consensus 247 y~f~ 250 (255)
T 3qqz_A 247 YRFT 250 (255)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 5554
No 249
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=98.59 E-value=0.00011 Score=62.68 Aligned_cols=209 Identities=14% Similarity=0.087 Sum_probs=128.8
Q ss_pred EecCCCCeeeEEecCCCCceEEEEeCCCcEEEEeCCCCCCCCcccceeeee-cCCcceeeEEeeCCCCcEEEEEeCCCeE
Q 014472 174 LRGHSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFK-VHEGVVEDVAWHLRHEYLFGSVGDDQYL 252 (424)
Q Consensus 174 ~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~-~~~~~v~~i~~~~~~~~~~~s~~~dg~i 252 (424)
+.+-...+.+|+|+|++..++++...++.|...|+. +.. +..+. .-......|++.+++. ++++.-.++.+
T Consensus 22 l~g~~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g~v------~~~i~l~g~~D~EGIa~~~~g~-~~vs~E~~~~l 93 (255)
T 3qqz_A 22 IAGITNNISSLTWSAQSNTLFSTINKPAAIVEMTTN-GDL------IRTIPLDFVKDLETIEYIGDNQ-FVISDERDYAI 93 (255)
T ss_dssp CTTCCSCEEEEEEETTTTEEEEEEETTEEEEEEETT-CCE------EEEEECSSCSSEEEEEECSTTE-EEEEETTTTEE
T ss_pred CCCcccCcceeEEeCCCCEEEEEECCCCeEEEEeCC-CCE------EEEEecCCCCChHHeEEeCCCE-EEEEECCCCcE
Confidence 345556799999999877566667888899999986 422 22221 1125678888888775 44455567889
Q ss_pred EEEECCCCCCCCCeeEec------ccCCCeeEEEecCCCCeEEEEEeCCC-cEEEEECCCCCCcceeec-------CCCC
Q 014472 253 LIWDLRTPSVSKPVQSVV------AHQSEVNCLAFNPFNEWILATGSTDK-TVKLFDLRKISTALHTFD-------SHKE 318 (424)
Q Consensus 253 ~i~d~~~~~~~~~~~~~~------~~~~~v~~i~~~~~~~~~l~~g~~dg-~i~iwd~~~~~~~~~~~~-------~~~~ 318 (424)
.++++........+.... ........|+|+|.+..++++.-.+. .|..|+-......+..+. .+-.
T Consensus 94 ~~~~v~~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g~~~~~~l~i~~~~~~~~~~~~~ 173 (255)
T 3qqz_A 94 YVISLTPNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNELHISKDKALQRQFTLD 173 (255)
T ss_dssp EEEEECTTCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEESTTCSSCCEEEECHHHHHTCCSS
T ss_pred EEEEcCCCCeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEEcccccCCceeeecchhhccccccC
Confidence 999886644211111111 23445789999999886565544443 444444111111222221 1234
Q ss_pred CEEEEEEcCCCCcEEEEEeCCCeEEEeeCCCCCcccCCCccCCCCCeeeEEEc-CC------CCCcceEEeCCCCCcEEE
Q 014472 319 EVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPEDAEDGPPELLFIHG-GH------TSKISDFSWNPCEDWVIS 391 (424)
Q Consensus 319 ~v~~~~~sp~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~-~h------~~~v~~~~~~~~~~~~l~ 391 (424)
.+.+++++|....+++.+.....+.++|.... . .-...+. +. ....-.|+|.++|+ +++
T Consensus 174 d~S~l~~dp~tg~lliLS~~s~~L~~~d~~g~-~------------~~~~~L~~g~~~l~~~~~qpEGia~d~~G~-lyI 239 (255)
T 3qqz_A 174 DVSGAEFNQQKNTLLVLSHESRALQEVTLVGE-V------------IGEMSLTKGSRGLSHNIKQAEGVAMDASGN-IYI 239 (255)
T ss_dssp CCCEEEEETTTTEEEEEETTTTEEEEECTTCC-E------------EEEEECSTTGGGCSSCCCSEEEEEECTTCC-EEE
T ss_pred CceeEEEcCCCCeEEEEECCCCeEEEEcCCCC-E------------EEEEEcCCccCCcccccCCCCeeEECCCCC-EEE
Confidence 67899999988888888888888999997642 1 1122222 11 12457899999998 565
Q ss_pred EEeCCCcEEEEecC
Q 014472 392 SVAEDNILQIWQMA 405 (424)
Q Consensus 392 s~~~d~~i~iw~~~ 405 (424)
+ ++-+.++++.-.
T Consensus 240 v-sE~n~~y~f~~~ 252 (255)
T 3qqz_A 240 V-SEPNRFYRFTPQ 252 (255)
T ss_dssp E-ETTTEEEEEEC-
T ss_pred E-cCCceEEEEEec
Confidence 5 777866666543
No 250
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=98.59 E-value=2.7e-06 Score=80.81 Aligned_cols=212 Identities=10% Similarity=0.018 Sum_probs=132.7
Q ss_pred EeccCCceeEEEe-c-CCCCcEEEEE-----------------ecCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCCe
Q 014472 121 QINHDGEVNRARY-M-PQNPFLIATK-----------------TVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEG 181 (424)
Q Consensus 121 ~~~h~~~v~~i~~-~-p~~~~~latg-----------------~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~h~~~v 181 (424)
.++....+..+++ . |++.++++++ -.++.+.+.|..+ .+...++.--. ..
T Consensus 129 ~ip~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~vtvID~~t----------~~v~~qI~Vgg-~p 197 (595)
T 1fwx_A 129 EIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVFTAVDADK----------WEVAWQVLVSG-NL 197 (595)
T ss_dssp ECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEEEEEEETTT----------TEEEEEEEESS-CC
T ss_pred eCCCCCCCcceeeeecCCCcEEEEecccccccCCCCcccccccccCceEEEEECCC----------CeEEEEEEeCC-Cc
Confidence 5665567888887 4 8888665553 3456889999886 34444444222 45
Q ss_pred eeEEecCCCCceEEEEeCCC--------------------------------------cEEEEeCCCCCCCCcccceeee
Q 014472 182 YGLSWSKFKEGHLLSGSDDA--------------------------------------QICLWDINAAPKNKSLEAMQIF 223 (424)
Q Consensus 182 ~~l~~~~~~~~~l~s~~~dg--------------------------------------~i~vwd~~~~~~~~~~~~~~~~ 223 (424)
..++.+|++. ++++++.+. .|.|.|..+... .. .+..+
T Consensus 198 d~~~~spdGk-~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~~V~VID~~~~~~-~~--~~~~I 273 (595)
T 1fwx_A 198 DNCDADYEGK-WAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELNGVKVVDGRKEAS-SL--FTRYI 273 (595)
T ss_dssp CCEEECSSSS-EEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEETTEEEEECSGGGC-CS--SEEEE
T ss_pred cceEECCCCC-EEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeEECcEEEEeCcccCC-ce--eEEEE
Confidence 6788899887 555555432 356666654110 00 01111
Q ss_pred ecCCcceeeEEeeCCCCcEEEEEeCCCeEEEEECCCCCC-----C---CCeeEecccCCCeeEEEecCCCCeEEEEEeCC
Q 014472 224 KVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSV-----S---KPVQSVVAHQSEVNCLAFNPFNEWILATGSTD 295 (424)
Q Consensus 224 ~~~~~~v~~i~~~~~~~~~~~s~~~dg~i~i~d~~~~~~-----~---~~~~~~~~~~~~v~~i~~~~~~~~~l~~g~~d 295 (424)
. -.....++.++|+|+++++++..+.+|.++|+.+.+. . ..+.....-......++|+|+| ++.++...|
T Consensus 274 p-vg~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~vG~gP~h~aF~~dG-~aY~t~~ld 351 (595)
T 1fwx_A 274 P-IANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPELGLGPLHTAFDGRG-NAYTSLFLD 351 (595)
T ss_dssp E-EESSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCBCCSCEEEEEECTTS-EEEEEETTT
T ss_pred e-cCCCceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEcCCCCCcceEEECCCC-eEEEEEecC
Confidence 1 1235678999999999999988999999999985310 0 0111111234568899999999 777888889
Q ss_pred CcEEEEECCCC---------CCcceeecCCCCCE-----EEEEEcCCCCcEEEEEeCC-CeE-----------EEeeCCC
Q 014472 296 KTVKLFDLRKI---------STALHTFDSHKEEV-----FQVGWNPKNETILASCCLG-RRL-----------MVWDLSR 349 (424)
Q Consensus 296 g~i~iwd~~~~---------~~~~~~~~~~~~~v-----~~~~~sp~~~~~l~s~~~d-g~i-----------~iwd~~~ 349 (424)
+.|.+||+... .+.+.++..|-.+- ..+..+|+|++++++.... .++ .++|+..
T Consensus 352 sqV~kwdi~~a~~~~~g~~~~~vi~kidV~yqpGh~~~~~g~t~~~DGk~l~~~Nk~skdr~~~~gp~~~~~~ql~dis~ 431 (595)
T 1fwx_A 352 SQVVKWNIEDAIRAYAGEKVDPIKDKLDVHYQPGHLKTVMGETLDATNDWLVCLSKFSKDRFLNVGPLKPENDQLIDISG 431 (595)
T ss_dssp TEEEEEEHHHHHHHHHTCSCCCEEEEEECSSCEEEEEETTTTSTTCCSSEEEEEESCCTTSSCCCCSSCCEEEEEEECSS
T ss_pred CcEEEEEhhHhhhhhcccccceeEEEeecccccccceeccceEeCCCCCEEEEcCCCCccccccCCCCCCCcceEEEcCC
Confidence 99999998651 34556666554322 2234579998655444332 234 7888854
No 251
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=98.58 E-value=1.5e-05 Score=79.13 Aligned_cols=237 Identities=8% Similarity=0.051 Sum_probs=133.7
Q ss_pred EEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEec--CCCCeeeEEecC--CCCceEEEEe------CCCcEEEEeCC
Q 014472 140 LIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRG--HSTEGYGLSWSK--FKEGHLLSGS------DDAQICLWDIN 209 (424)
Q Consensus 140 ~latg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~--h~~~v~~l~~~~--~~~~~l~s~~------~dg~i~vwd~~ 209 (424)
.|++++.|+.|..+|..+ .+.+..... +......+..+| .+. .++.++ .+|.|..||..
T Consensus 123 ~v~v~~~dg~l~AlDa~T----------G~~~W~~~~~~~~~~~~~~~~sP~v~~g-~v~vg~~~~~~~~~g~v~a~D~~ 191 (689)
T 1yiq_A 123 KVYVGVLDGRLEAIDAKT----------GQRAWSVDTRADHKRSYTITGAPRVVNG-KVVIGNGGAEFGVRGYVTAYDAE 191 (689)
T ss_dssp EEEEECTTSEEEEEETTT----------CCEEEEEECCSCTTSCCBCCSCCEEETT-EEEECCBCTTTCCBCEEEEEETT
T ss_pred EEEEEccCCEEEEEECCC----------CCEeeeecCcCCCCCCccccCCcEEECC-EEEEEeCCCccCCCCEEEEEECC
Confidence 577778899999999877 333333332 111111111122 122 355543 36899999999
Q ss_pred CCCCCCccccee-----e------------ee--------cCCcceeeEEeeCCCCcEEEEEeCCC--------------
Q 014472 210 AAPKNKSLEAMQ-----I------------FK--------VHEGVVEDVAWHLRHEYLFGSVGDDQ-------------- 250 (424)
Q Consensus 210 ~~~~~~~~~~~~-----~------------~~--------~~~~~v~~i~~~~~~~~~~~s~~~dg-------------- 250 (424)
+++....+.... . +. ++......++++|... +++.+..++
T Consensus 192 tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~w~~~~~g~~~w~~~~~d~~~~-~vy~~~~~g~~w~~~~~~~~~gd 270 (689)
T 1yiq_A 192 TGKEAWRFYTVPGDPKLPPEGKGMEIAAKTWFGDAYVEQGGGGTAWDSFAYDPELN-LLYIGVGNGSLWDPKWRSQAKGD 270 (689)
T ss_dssp TCCEEEEEESSCCCTTSCCCSHHHHHHHTTCCSSTHHHHCEECCCCSCEEEETTTT-EEEEECCCEESSCHHHHHTTCSC
T ss_pred CCcEEEEecccCCCcccccccccccccccccCCceeeecCCCCccccceeEcCCCC-EEEEeCCCCCccccCCCCCCCCC
Confidence 886432221100 0 00 1111123578888776 445676665
Q ss_pred -----eEEEEECCCCCCCCCeeEecc--cC-------CCeeEEEecCCCC--eEEEEEeCCCcEEEEECCCCCCcceeec
Q 014472 251 -----YLLIWDLRTPSVSKPVQSVVA--HQ-------SEVNCLAFNPFNE--WILATGSTDKTVKLFDLRKISTALHTFD 314 (424)
Q Consensus 251 -----~i~i~d~~~~~~~~~~~~~~~--~~-------~~v~~i~~~~~~~--~~l~~g~~dg~i~iwd~~~~~~~~~~~~ 314 (424)
.|..+|.++++. +-.+.. |. .++.......+|. .+++.++.+|.++++|.++ ++++....
T Consensus 271 ~~y~~~v~AlD~~TG~~---~W~~~~~~~d~wd~~~~~~~~l~d~~~~G~~~~~v~~~~~~G~l~~lD~~t-G~~l~~~~ 346 (689)
T 1yiq_A 271 NLFLSSIVAVNADTGEY---VWHYQTTPGDAWDYTATQHMILAELPIDGKPRKVLMQAPKNGFFYVIDRAT-GELLSAKG 346 (689)
T ss_dssp CTTTTEEEEEETTTCCE---EEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTT-CCEEEEEE
T ss_pred ceeeeeEEEEEccCCce---eEeeecCCcccccccCCCCcEEEeeccCCcEEEEEEEECCCCeEEEEECCC-CCEecccc
Confidence 399999999875 333222 21 1222222222332 3688899999999999988 55542221
Q ss_pred CCC----------------------------C-----------CEEEEEEcCCCCcEEEEEeC-----------------
Q 014472 315 SHK----------------------------E-----------EVFQVGWNPKNETILASCCL----------------- 338 (424)
Q Consensus 315 ~~~----------------------------~-----------~v~~~~~sp~~~~~l~s~~~----------------- 338 (424)
... . .-..++++|+.. ++++...
T Consensus 347 ~~~~~w~~~~~~~~~~pi~~~~~~~~~~~~~~~~~~p~~~Gg~~w~~~a~dp~~~-~~yv~~~~~~~~~~~~~~~~~~~~ 425 (689)
T 1yiq_A 347 IVPQSWTKGMDMKTGRPILDEENAAYWKNGKRNLVTPAFWGAHDWQPMSYNPDTG-LVYIPAHIMSAYYEHIPEAPKRNP 425 (689)
T ss_dssp SSCCSSEEEEETTTTEEEECHHHHCTTTSSSCEEESSCTTCSSCSSCCEEETTTT-EEEEEEEECCEEEECCSSCCCCCS
T ss_pred ccccccccccCccCCCcccchhhccccCCCCeeEeCCCcccccCCCcceECCCCC-EEEEeccccceeeeeccccccccc
Confidence 100 0 012368888875 5555432
Q ss_pred ----------------------------CCeEEEeeCCCCCcccCCCccCCCCCeeeEEEcCCCCCcceEEeCCCCCcEE
Q 014472 339 ----------------------------GRRLMVWDLSRIDEEQTPEDAEDGPPELLFIHGGHTSKISDFSWNPCEDWVI 390 (424)
Q Consensus 339 ----------------------------dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l 390 (424)
+|.|..||+.++ +.+..+..+. .+..-.+...+. ++
T Consensus 426 ~~~~~~~g~~~~~~p~~~~~~~~~~~~~~g~l~A~D~~tG--------------~~~W~~~~~~-~~~~g~~~tagg-lv 489 (689)
T 1yiq_A 426 FKSMYQLGLRTGMMPEGAEGLLEMAKSWSGKLIAWDPVKQ--------------QAAWEVPYVT-IFNGGTLSTAGN-LV 489 (689)
T ss_dssp CTTSCCCSSEECCCCSSHHHHHHHHTTCEEEEEEEETTTT--------------EEEEEEEESS-SCCCCEEEETTT-EE
T ss_pred cccccccCccccccCcccccCCCCCCCcceeEEEEECCCC--------------CeEeEccCCC-CccCccceECCC-EE
Confidence 366777777765 3344433332 234445555666 78
Q ss_pred EEEeCCCcEEEEecCCCCC
Q 014472 391 SSVAEDNILQIWQMAENIY 409 (424)
Q Consensus 391 ~s~~~d~~i~iw~~~~~~~ 409 (424)
+.++.||.|+.||..++..
T Consensus 490 f~gt~dg~l~a~D~~tG~~ 508 (689)
T 1yiq_A 490 FEGSADGRVIAYAADTGEK 508 (689)
T ss_dssp EEECTTSEEEEEETTTCCE
T ss_pred EEECCCCcEEEEECCCCcc
Confidence 8889999999999998854
No 252
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.58 E-value=4.5e-06 Score=70.97 Aligned_cols=197 Identities=12% Similarity=0.107 Sum_probs=117.5
Q ss_pred CCCC--eeeEEecCCCCceEEEEeCCC--cEEEEeCCCCCCCCcccceeeeecCCcceeeEEeeCCCCcEEEEEeCCCeE
Q 014472 177 HSTE--GYGLSWSKFKEGHLLSGSDDA--QICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYL 252 (424)
Q Consensus 177 h~~~--v~~l~~~~~~~~~l~s~~~dg--~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~~s~~~dg~i 252 (424)
|... ..+|.|+ ++ .++.+.+.+| .|+++|+.+++... .... ..........+.+..+++..-.++.+
T Consensus 39 hd~~~ftqGL~~~-~~-~LyestG~~g~S~v~~vD~~Tgkv~~------~~~l-~~~~FgeGit~~g~~ly~ltw~~~~v 109 (262)
T 3nol_A 39 HDTKAFTEGFFYR-NG-YFYESTGLNGRSSIRKVDIESGKTLQ------QIEL-GKRYFGEGISDWKDKIVGLTWKNGLG 109 (262)
T ss_dssp CCTTCEEEEEEEE-TT-EEEEEEEETTEEEEEEECTTTCCEEE------EEEC-CTTCCEEEEEEETTEEEEEESSSSEE
T ss_pred CCCCcccceEEEE-CC-EEEEECCCCCCceEEEEECCCCcEEE------EEec-CCccceeEEEEeCCEEEEEEeeCCEE
Confidence 5443 4788998 44 4677777766 89999999874322 2221 22232222233456788777789999
Q ss_pred EEEECCCCCCCCCeeEecccCCCeeEEEecCCCCeEEEEEeCCCcEEEEECCCCCCcceeecCC--C---CCEEEEEEcC
Q 014472 253 LIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATGSTDKTVKLFDLRKISTALHTFDSH--K---EEVFQVGWNP 327 (424)
Q Consensus 253 ~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~--~---~~v~~~~~sp 327 (424)
.+||..+.+. +.++.... .-..++ +++..++++ ..++.|.++|..+ .+.+..+... . ..++.+.|.
T Consensus 110 ~v~D~~t~~~---~~ti~~~~-eG~glt--~dg~~L~~S-dGs~~i~~iDp~T-~~v~~~I~V~~~g~~~~~lNELe~~- 180 (262)
T 3nol_A 110 FVWNIRNLRQ---VRSFNYDG-EGWGLT--HNDQYLIMS-DGTPVLRFLDPES-LTPVRTITVTAHGEELPELNELEWV- 180 (262)
T ss_dssp EEEETTTCCE---EEEEECSS-CCCCEE--ECSSCEEEC-CSSSEEEEECTTT-CSEEEEEECEETTEECCCEEEEEEE-
T ss_pred EEEECccCcE---EEEEECCC-CceEEe--cCCCEEEEE-CCCCeEEEEcCCC-CeEEEEEEeccCCccccccceeEEE-
Confidence 9999998664 55554322 223444 456655544 4578899999987 4555555431 2 335567887
Q ss_pred CCCcEEEEEeCCCeEEEeeCCCCCcccCCCccCCCCCeeeEEEcCCCCCcceEEeCCCCCcEEEEEe
Q 014472 328 KNETILASCCLGRRLMVWDLSRIDEEQTPEDAEDGPPELLFIHGGHTSKISDFSWNPCEDWVISSVA 394 (424)
Q Consensus 328 ~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~ 394 (424)
+| .+++..-.++.|.+.|..++..........-.+.... ...-....+.++|+|+++.++++|-
T Consensus 181 ~G-~lyan~w~~~~I~vIDp~tG~V~~~Id~~~L~~~~~~--~~~~~~vlNGIA~dp~~~~lfVTGK 244 (262)
T 3nol_A 181 DG-EIFANVWQTNKIVRIDPETGKVTGIIDLNGILAEAGP--LPSPIDVLNGIAWDKEHHRLFVTGK 244 (262)
T ss_dssp TT-EEEEEETTSSEEEEECTTTCBEEEEEECTTGGGGSCS--CCSSCCCEEEEEEETTTTEEEEEET
T ss_pred CC-EEEEEEccCCeEEEEECCCCcEEEEEECCcCcccccc--ccCcCCceEEEEEcCCCCEEEEECC
Confidence 56 4666665788999999988754332211100000000 0011235689999999886777754
No 253
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=98.54 E-value=9.9e-05 Score=69.22 Aligned_cols=267 Identities=11% Similarity=0.031 Sum_probs=146.7
Q ss_pred eeEEEecCC-CCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEecC----CCCeeeEEe-------cCCCCceEE
Q 014472 128 VNRARYMPQ-NPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGH----STEGYGLSW-------SKFKEGHLL 195 (424)
Q Consensus 128 v~~i~~~p~-~~~~latg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~h----~~~v~~l~~-------~~~~~~~l~ 195 (424)
...|+|.|. +.+++++....+.|++.|... ..+..+..- ......|+| ++++.. |+
T Consensus 141 p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~-----------~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~-ly 208 (496)
T 3kya_A 141 NGRLAFDPLNKDHLYICYDGHKAIQLIDLKN-----------RMLSSPLNINTIPTNRIRSIAFNKKIEGYADEAEY-MI 208 (496)
T ss_dssp EEEEEEETTEEEEEEEEEETEEEEEEEETTT-----------TEEEEEECCTTSSCSBEEEEEECCCBTTTBCTTCE-EE
T ss_pred CCEEEEccCCCCEEEEEECCCCeEEEEECCC-----------CEEEEEEccCccccCCCcEEEEeecccccCCCCCE-EE
Confidence 568999983 555666655556788888776 222333221 225789999 998874 55
Q ss_pred EEeCCC-------cEEEEeCCCCCCCCcccceeeeecCCcceeeEEeeCCCCcEEEEEeCCCeEEEEECC-------CCC
Q 014472 196 SGSDDA-------QICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLR-------TPS 261 (424)
Q Consensus 196 s~~~dg-------~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~~s~~~dg~i~i~d~~-------~~~ 261 (424)
++...+ .|.+++...............+.. -.....++.+|++..|+++-..++.|..+|+. ++.
T Consensus 209 vad~~~~~~~~~~~V~~i~r~~~G~~~~~~~~~~v~~-~~~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~ 287 (496)
T 3kya_A 209 VAIDYDGKGDESPSVYIIKRNADGTFDDRSDIQLIAA-YKQCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGG 287 (496)
T ss_dssp EEECCCTTGGGEEEEEEEECCTTSCCSTTSCEEEEEE-ESCCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTC
T ss_pred EEeCCCCCcccCceEEEEecCCCCceeecccceeecc-CCCceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCce
Confidence 554433 266666433111110000011111 12456888999878888888889999999997 444
Q ss_pred CCCC--------eeEe--cccCCCeeEEEecCCCCeEEEEEeCCCcEEEEECCCCCCcc---eeecCC---C--------
Q 014472 262 VSKP--------VQSV--VAHQSEVNCLAFNPFNEWILATGSTDKTVKLFDLRKISTAL---HTFDSH---K-------- 317 (424)
Q Consensus 262 ~~~~--------~~~~--~~~~~~v~~i~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~---~~~~~~---~-------- 317 (424)
...+ ...+ .......+.|+|+|++..++++-.....|+.+|.......+ ..+-+. .
T Consensus 288 ~~tp~~~~~~g~~~~l~~~~~~~~p~~ia~~p~G~~lYvaD~~~h~I~kid~dg~~~~~~~~~~~aG~~g~~G~~DG~~~ 367 (496)
T 3kya_A 288 SWDPIVKNNPNTFKQLFTIADPSWEFQIFIHPTGKYAYFGVINNHYFMRSDYDEIKKEFITPYNFVGGYKQSGYRDDVGT 367 (496)
T ss_dssp CCCCBGGGCTTTEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEECCCEEEEEBTTBCCCBCCBGG
T ss_pred eecccccccccccceeEecCCCCCceEEEEcCCCCEEEEEeCCCCEEEEEecCCCcceecccEEecCCCCCCcccCCccc
Confidence 3111 1111 11234568999999998655555667789987654311111 122111 0
Q ss_pred ----CCEE-EEEEc-------CCCCcEEEEEeCCCeEEEeeCCCCCcccCCCcc--------------CCC-CCeeeEEE
Q 014472 318 ----EEVF-QVGWN-------PKNETILASCCLGRRLMVWDLSRIDEEQTPEDA--------------EDG-PPELLFIH 370 (424)
Q Consensus 318 ----~~v~-~~~~s-------p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~--------------~~~-~~~~~~~~ 370 (424)
.... .++.. +.+ .++++-....+|+.++. .+ ........ .++ +..
T Consensus 368 ~a~f~~P~~gv~vd~~~~~~~~~g-~lyVaD~~N~rIr~i~~-~G-~v~TiaG~g~~~~~~~~~~~G~~dG~~~~----- 439 (496)
T 3kya_A 368 EARMNNPCQGVFVKNPDYTGEEEY-DFYFVDRLNFCVRKVTP-EG-IVSTYAGRGASTSLADGNQWGTDDGDLRE----- 439 (496)
T ss_dssp GCBCSSEEEEEEEECTTCCSSCCE-EEEEEEGGGTEEEEECT-TC-BEEEEEESCTTHHHHHSCSCCCCCEETTT-----
T ss_pred ccccCCCeEEEEEccccccccCCC-eEEEEECCCCEEEEEeC-CC-CEEEEecccccccccCccccccCCCCchh-----
Confidence 1233 44443 344 46666667788888884 22 11111000 000 000
Q ss_pred cCCCCCcceEEeCCC-CCcEEEEEeCCCcEEEEecCCCCCCCCCCCC
Q 014472 371 GGHTSKISDFSWNPC-EDWVISSVAEDNILQIWQMAENIYHDEDDLP 416 (424)
Q Consensus 371 ~~h~~~v~~~~~~~~-~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~ 416 (424)
...-.....|+++++ +. ++++=..+.+|+.+++.......+.+.+
T Consensus 440 ~a~f~~P~gIavd~~~g~-lyVaD~~N~rIrki~~~~~~~~~~~~~~ 485 (496)
T 3kya_A 440 VARFRDVSGLVYDDVKEM-FYVHDQVGHTIRTISMEQEENVAGDENI 485 (496)
T ss_dssp TCCCSSEEEEEEETTTTE-EEEEETTTTEEEEEEECCCC--------
T ss_pred hhhcCCCcEEEEECCCCE-EEEEeCCCCEEEEEECCCCcccccCCCC
Confidence 001124678999997 66 7777778889999999988766554433
No 254
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=98.53 E-value=0.00032 Score=62.44 Aligned_cols=227 Identities=7% Similarity=-0.020 Sum_probs=141.8
Q ss_pred CCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCCeeeEEecCCCCceEEEEeCCCcEEEEeCCCCCCCCcccceeeeecC
Q 014472 147 SAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVH 226 (424)
Q Consensus 147 dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~ 226 (424)
...|+..++.... .. ...+......+.+|+|.+.+..++.+-...+.|..+++....... ......
T Consensus 12 ~~~I~~i~l~~~~--------~~-~~~~~~~~~~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~~-----~~~~~~ 77 (318)
T 3sov_A 12 RRDLRLVDATNGK--------EN-ATIVVGGLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQ-----NVVVSG 77 (318)
T ss_dssp EEEEEEEETTCTT--------SC-CEEEEEEEEEEEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCCC-----EEEEEC
T ss_pred cCeEEEEECCCCc--------eE-EEEEecCCCccEEEEEEeCCCEEEEEECCCCcEEEEEccCCCceE-----EEEcCC
Confidence 4679999987621 11 111222223567999998766555565667889999987652211 111122
Q ss_pred CcceeeEEeeCCCCcEEEEEeCCCeEEEEECCCCCCCCCeeEecccCCCeeEEEecCCCCeEEEEEe-CCCcEEEEECCC
Q 014472 227 EGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATGS-TDKTVKLFDLRK 305 (424)
Q Consensus 227 ~~~v~~i~~~~~~~~~~~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~l~~g~-~dg~i~iwd~~~ 305 (424)
-.....+++.+.+..++.+-...+.|.++++..... .............|+++|.+.+++.+-. ..+.|..+++..
T Consensus 78 l~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~---~~l~~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG 154 (318)
T 3sov_A 78 LLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLR---KVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDG 154 (318)
T ss_dssp CSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSC---EEEECSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTS
T ss_pred CCCccEEEEEcCCCeEEEEECCCCEEEEEECCCCcE---EEEEeCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCC
Confidence 245678899887777887777788999999875331 2222233456789999997776555542 357888888764
Q ss_pred CCCcceee-cCCCCCEEEEEEcCCCCcEEEEEeCCCeEEEeeCCCCCcccCCCccCCCCCeeeEEEcCCCCCcceEEeCC
Q 014472 306 ISTALHTF-DSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPEDAEDGPPELLFIHGGHTSKISDFSWNP 384 (424)
Q Consensus 306 ~~~~~~~~-~~~~~~v~~~~~sp~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~ 384 (424)
.....+ ...-.....++++|++..++.+-+..+.|..+++..... +.+. .+......++++..
T Consensus 155 --~~~~~~~~~~l~~Pnglavd~~~~~lY~aD~~~~~I~~~d~dG~~~------------~~~~--~~~~~~P~glav~~ 218 (318)
T 3sov_A 155 --SSRFIIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNR------------QAVV--KGSLPHPFALTLFE 218 (318)
T ss_dssp --CSCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC------------EEEE--CSCCSCEEEEEEET
T ss_pred --CCeEEEEECCCCCccEEEEeccCCEEEEEECCCCEEEEEcCCCCce------------EEEe--cCCCCCceEEEEeC
Confidence 222222 222346789999997776777777788899999864211 1111 22233456677643
Q ss_pred CCCcEEEEEeCCCcEEEEecCCCC
Q 014472 385 CEDWVISSVAEDNILQIWQMAENI 408 (424)
Q Consensus 385 ~~~~~l~s~~~d~~i~iw~~~~~~ 408 (424)
..++.+-...+.|..++..++.
T Consensus 219 --~~lywtd~~~~~V~~~~~~~G~ 240 (318)
T 3sov_A 219 --DILYWTDWSTHSILACNKYTGE 240 (318)
T ss_dssp --TEEEEEETTTTEEEEEETTTCC
T ss_pred --CEEEEEecCCCeEEEEECCCCC
Confidence 3367776677888888886553
No 255
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=98.51 E-value=2.9e-05 Score=76.91 Aligned_cols=201 Identities=7% Similarity=0.057 Sum_probs=120.9
Q ss_pred eeEEecCCCCceEEEEeCCC-------------------cEEEEeCCCCCCCCcccceeeeecCC-------cceeeEEe
Q 014472 182 YGLSWSKFKEGHLLSGSDDA-------------------QICLWDINAAPKNKSLEAMQIFKVHE-------GVVEDVAW 235 (424)
Q Consensus 182 ~~l~~~~~~~~~l~s~~~dg-------------------~i~vwd~~~~~~~~~~~~~~~~~~~~-------~~v~~i~~ 235 (424)
..+++.|.+. +++.+..++ .|..+|..+++....++. ..|. ....-+..
T Consensus 246 ~~~~~d~~~~-~vy~~~~~~~~w~~~~~~~~~gd~~~~~sv~AlD~~TG~~~W~~~~----~~~d~wd~~~~~~p~l~~~ 320 (677)
T 1kb0_A 246 DSMTFDAELN-TMYVGTGNGSPWSHKVRSPKGGDNLYLASIVALDPDTGKYKWHYQE----TPGDNWDYTSTQPMILADI 320 (677)
T ss_dssp SCEEEETTTT-EEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEES----STTCCSCCCCCSCCEEEEE
T ss_pred cceeEcCCCC-EEEEECCCCccccCCCCCccCCCCeeeEEEEEEECCCCCEEEEEec----CCCcccccccCCCcEEEec
Confidence 3567777766 677766553 489999988754322211 1111 11222223
Q ss_pred eCCCC--cEEEEEeCCCeEEEEECCCCCCCCCeeEeccc-----------CCCe------------------------eE
Q 014472 236 HLRHE--YLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAH-----------QSEV------------------------NC 278 (424)
Q Consensus 236 ~~~~~--~~~~s~~~dg~i~i~d~~~~~~~~~~~~~~~~-----------~~~v------------------------~~ 278 (424)
..+++ .+++.++.+|.|+++|.++++. +...... ..++ ..
T Consensus 321 ~~dG~~~~~l~~~~~~G~l~~lD~~tG~~---l~~~~~~~~~~~~~~d~~g~~~~~~~~~~~~~~~~~~P~~~G~~~w~~ 397 (677)
T 1kb0_A 321 KIAGKPRKVILHAPKNGFFFVLDRTNGKF---ISAKNFVPVNWASGYDKHGKPIGIAAARDGSKPQDAVPGPYGAHNWHP 397 (677)
T ss_dssp EETTEEEEEEEECCTTSEEEEEETTTCCE---EEEEESSCCSSEEEECTTSCEEECGGGGCTTSCEECSSCTTCSSCSSC
T ss_pred ccCCcEeeEEEEECCCCEEEEEECCCCCE---eccccccccCcccccCCCCceeeccccCcCCCccEECcCcccccCCCC
Confidence 33552 4667889999999999998774 2222110 0011 25
Q ss_pred EEecCCCCeEEEEEeC-------------------------------------------CCcEEEEECCCCCCcceeecC
Q 014472 279 LAFNPFNEWILATGST-------------------------------------------DKTVKLFDLRKISTALHTFDS 315 (424)
Q Consensus 279 i~~~~~~~~~l~~g~~-------------------------------------------dg~i~iwd~~~~~~~~~~~~~ 315 (424)
++++|++. ++++... .|.|..||+.+ ++.+-.+..
T Consensus 398 ~a~dp~~~-~~yv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~l~A~D~~t-G~~~W~~~~ 475 (677)
T 1kb0_A 398 MSFNPQTG-LVYLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTGWNTAKFFNAEPPKSKPFGRLLAWDPVA-QKAAWSVEH 475 (677)
T ss_dssp CEEETTTT-EEEEEEEECCCEEEECTTCCTTCCCTTSTTGGGTCCCCEEECSSCCCSCCEEEEEEEETTT-TEEEEEEEE
T ss_pred ceEcCCCC-EEEEeChhcceeeecccccccccccccccccccccccccccccccCCCCCccEEEEEeCCC-CcEEeecCC
Confidence 68888877 4555432 27899999988 565555543
Q ss_pred CCCCEEEEEEcCCCCcEEEEEeCCCeEEEeeCCCCCcccCCCccCCCCCeeeEEEc-CCCCCcceEEeCCCCCcEEEEEe
Q 014472 316 HKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPEDAEDGPPELLFIHG-GHTSKISDFSWNPCEDWVISSVA 394 (424)
Q Consensus 316 ~~~~v~~~~~sp~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~-~h~~~v~~~~~~~~~~~~l~s~~ 394 (424)
..++....+...+. +++.++.||.+++||..+++ .+..+. ++.....-+.|..+|+.+++..+
T Consensus 476 -~~~~~~g~~~~~g~-~v~~g~~dg~l~a~D~~tG~--------------~lw~~~~~~~~~~~p~~y~~~G~~~v~~~~ 539 (677)
T 1kb0_A 476 -VSPWNGGTLTTAGN-VVFQGTADGRLVAYHAATGE--------------KLWEAPTGTGVVAAPSTYMVDGRQYVSVAV 539 (677)
T ss_dssp -SSSCCCCEEEETTT-EEEEECTTSEEEEEETTTCC--------------EEEEEECSSCCCSCCEEEEETTEEEEEEEE
T ss_pred -CCCCcCcceEeCCC-EEEEECCCCcEEEEECCCCc--------------eeeeeeCCCCcccCCEEEEeCCEEEEEEec
Confidence 33444555666665 67778999999999999874 344433 33233344667788874454433
Q ss_pred C----------------CCcEEEEecCCCC
Q 014472 395 E----------------DNILQIWQMAENI 408 (424)
Q Consensus 395 ~----------------d~~i~iw~~~~~~ 408 (424)
. .+.+.+|.+....
T Consensus 540 G~~~~~~~~~~~~~~~~~~~l~~f~l~~~a 569 (677)
T 1kb0_A 540 GWGGVYGLAARATERQGPGTVYTFVVGGKA 569 (677)
T ss_dssp CCCHHHHHHCCSCSCCCCCEEEEEEETCBC
T ss_pred cCCccccccccccccCCCCeEEEEeccccc
Confidence 2 4688899987543
No 256
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.50 E-value=1.9e-05 Score=67.16 Aligned_cols=193 Identities=9% Similarity=0.034 Sum_probs=117.9
Q ss_pred eeeEEecCCCCceEEEEeCCCcEEEEeCCCCCCCCcccceeeeecCCcceeeEEeeCCCCcEEEEEeCCCeEEEEECCCC
Q 014472 181 GYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTP 260 (424)
Q Consensus 181 v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~~s~~~dg~i~i~d~~~~ 260 (424)
..+|.|+. ..++.+.+.+|.|+++|+.+++....+ +. ......-..+.+..+++..-.++.+.+||..+.
T Consensus 57 tqGL~~~~--~~Ly~stG~~g~v~~iD~~Tgkv~~~~-----l~---~~~FgeGit~~g~~Ly~ltw~~~~v~V~D~~Tl 126 (268)
T 3nok_A 57 TQGLVFHQ--GHFFESTGHQGTLRQLSLESAQPVWME-----RL---GNIFAEGLASDGERLYQLTWTEGLLFTWSGMPP 126 (268)
T ss_dssp EEEEEEET--TEEEEEETTTTEEEECCSSCSSCSEEE-----EC---TTCCEEEEEECSSCEEEEESSSCEEEEEETTTT
T ss_pred cceEEEEC--CEEEEEcCCCCEEEEEECCCCcEEeEE-----CC---CCcceeEEEEeCCEEEEEEccCCEEEEEECCcC
Confidence 36888873 447788888899999999988553322 11 122222223345678878778999999999986
Q ss_pred CCCCCeeEecccCCCeeEEEecCCCCeEEEEEeCCCcEEEEECCCCCCcceeecC--CC---CCEEEEEEcCCCCcEEEE
Q 014472 261 SVSKPVQSVVAHQSEVNCLAFNPFNEWILATGSTDKTVKLFDLRKISTALHTFDS--HK---EEVFQVGWNPKNETILAS 335 (424)
Q Consensus 261 ~~~~~~~~~~~~~~~v~~i~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~--~~---~~v~~~~~sp~~~~~l~s 335 (424)
+. +.++... ..-..++ +++..++ .+..++.|.++|..+ .+.+..+.. +. ..++.+.|. +| .+++.
T Consensus 127 ~~---~~ti~~~-~eGwGLt--~Dg~~L~-vSdGs~~l~~iDp~T-~~v~~~I~V~~~g~~v~~lNeLe~~-dG-~lyan 196 (268)
T 3nok_A 127 QR---ERTTRYS-GEGWGLC--YWNGKLV-RSDGGTMLTFHEPDG-FALVGAVQVKLRGQPVELINELECA-NG-VIYAN 196 (268)
T ss_dssp EE---EEEEECS-SCCCCEE--EETTEEE-EECSSSEEEEECTTT-CCEEEEEECEETTEECCCEEEEEEE-TT-EEEEE
T ss_pred cE---EEEEeCC-CceeEEe--cCCCEEE-EECCCCEEEEEcCCC-CeEEEEEEeCCCCcccccccccEEe-CC-EEEEE
Confidence 64 5554432 2224444 4466544 445688999999988 455555543 22 245677887 56 46666
Q ss_pred EeCCCeEEEeeCCCCCcccCCCccCCCCCeeeEEEcCCCCCcceEEeCCCCCcEEEEEe
Q 014472 336 CCLGRRLMVWDLSRIDEEQTPEDAEDGPPELLFIHGGHTSKISDFSWNPCEDWVISSVA 394 (424)
Q Consensus 336 ~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~ 394 (424)
.-.++.|.+.|..++..........-.+ ........-....+.|+|+|++..+++||-
T Consensus 197 vw~s~~I~vIDp~TG~V~~~Idl~~L~~-~~~~~~~~~~~vlNGIA~dp~~~rlfVTGK 254 (268)
T 3nok_A 197 IWHSSDVLEIDPATGTVVGVIDASALTR-AVAGQVTNPEAVLNGIAVEPGSGRIFMTGK 254 (268)
T ss_dssp ETTCSEEEEECTTTCBEEEEEECHHHHH-HHTTTCCCTTCCEEEEEECTTTCCEEEEET
T ss_pred ECCCCeEEEEeCCCCcEEEEEECCCCcc-cccccccCcCCceEEEEEcCCCCEEEEeCC
Confidence 6568899999998875432221100000 000000011235789999998887888764
No 257
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=98.46 E-value=0.00071 Score=62.40 Aligned_cols=213 Identities=8% Similarity=0.032 Sum_probs=133.3
Q ss_pred eccCCceeEEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCCeeeEEecCCCCceEEEEeCCC
Q 014472 122 INHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDDA 201 (424)
Q Consensus 122 ~~h~~~v~~i~~~p~~~~~latg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg 201 (424)
+.....+..|+|.+.+..++.+-...+.|+.+++..... .......+........+|++.+.+..++++-...+
T Consensus 108 ~~~~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~------~~~~~~~~~~~~~~p~glavD~~~~~lY~~d~~~~ 181 (400)
T 3p5b_L 108 IPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHG------VSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLG 181 (400)
T ss_dssp ECSCSCEEEEEEETTTTEEEEEETTTTEEEEEEC------------CCCEEEECSSCSCEEEEEEETTTTEEEEEETTTT
T ss_pred ccccCcceEEeeeeccCceEEEecCCCeEEEEEcccCCC------CCcceEEEeCCCCCcccEEEEecCCceEEEECCCC
Confidence 344567889999987766777766778999898865110 01112222323456778888876665566666678
Q ss_pred cEEEEeCCCCCCCCcccceeeeecCCcceeeEEeeCCCCcEEEEEeC-CCeEEEEECCCCCCCCCeeEecccCCCeeEEE
Q 014472 202 QICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGD-DQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLA 280 (424)
Q Consensus 202 ~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~~s~~~-dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~ 280 (424)
.|.+.+++.... ...+...-.....|+++|.+..++.+-.. .+.|...++..... .......-...+.|+
T Consensus 182 ~I~~~~~~g~~~------~~l~~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~~~---~~~~~~~l~~P~gla 252 (400)
T 3p5b_L 182 TVSVADTKGVKR------KTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDI---YSLVTENIQWPNGIT 252 (400)
T ss_dssp EEEEECTTTCSE------EEEEECSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSCSC---EEEECSSCSCEEEEE
T ss_pred eEEEEeCCCCce------EEEEeCCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCCcc---EEEEECCCCceEEEE
Confidence 899999875421 11122233457899999987777766533 47898888875432 222222335678999
Q ss_pred ecCCCCeEEEEEeCCCcEEEEECCCCCCcceeec--CCCCCEEEEEEcCCCCcEEEEEeCCCeEEEeeCCCCCc
Q 014472 281 FNPFNEWILATGSTDKTVKLFDLRKISTALHTFD--SHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDE 352 (424)
Q Consensus 281 ~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~--~~~~~v~~~~~sp~~~~~l~s~~~dg~i~iwd~~~~~~ 352 (424)
+++.+..+.++=...+.|..+|+.. ........ ..-.....++.. +..++.+-...+.|..++..++..
T Consensus 253 vd~~~~~lY~aD~~~~~I~~~d~dG-~~~~~~~~~~~~l~~P~gl~v~--~~~lywtd~~~~~V~~~~~~~G~~ 323 (400)
T 3p5b_L 253 LDLLSGRLYWVDSKLHSISSIDVNG-GNRKTILEDEKRLAHPFSLAVF--EDKVFWTDIINEAIFSANRLTGSD 323 (400)
T ss_dssp EETTTTEEEEEETTTTEEEEEETTS-CCCEEEEECSSTTSSEEEEEEE--TTEEEEEESSSCSEEEEESSSCCC
T ss_pred EEeCCCEEEEEECCCCEEEEEeCCC-CccEEEEeCCCCCCCCEEEEEe--CCEEEEecCCCCeEEEEEcCCCCc
Confidence 9998887666666678899999875 22222222 122345677763 335677777778899888766543
No 258
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=98.44 E-value=0.00042 Score=69.40 Aligned_cols=230 Identities=10% Similarity=-0.020 Sum_probs=138.2
Q ss_pred CCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCCeeeEEecCCCCceEEEEeCCCcEEEEeCCCCCCCCcccceeeeecC
Q 014472 147 SAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVH 226 (424)
Q Consensus 147 dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~ 226 (424)
...|+..++.. .....+......+.+|+|.+....++++-...+.|+.+++........ ....+...
T Consensus 403 ~~~Ir~i~l~~-----------~~~~~l~~~~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~--~~~vi~~~ 469 (791)
T 3m0c_C 403 RHEVRKMTLDR-----------SEYTSLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSS--YDTVISRD 469 (791)
T ss_dssp BSSEEEECTTS-----------CCCEEEECSCSSEEEEEEETTTTEEEEEETTTTEEEEEEC----------CEEEECSS
T ss_pred ccceeEeeccC-----------CcceeeecCCCceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcc--eeEEEecC
Confidence 34577777664 112334444567789999986664555656678899999875321001 11222223
Q ss_pred CcceeeEEeeCCCCcEEEEEeCCCeEEEEECCCCCCCCCeeEecccCCCeeEEEecCCCCeEEEEEeCC-CcEEEEECCC
Q 014472 227 EGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATGSTD-KTVKLFDLRK 305 (424)
Q Consensus 227 ~~~v~~i~~~~~~~~~~~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~l~~g~~d-g~i~iwd~~~ 305 (424)
......|++.+.+.+|+.+-...+.|.+.++..... ...+.........|+++|.+.+++++-... +.|...++..
T Consensus 470 l~~P~GLAvD~~~~~LY~tD~~~~~I~v~~ldG~~~---~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG 546 (791)
T 3m0c_C 470 IQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKR---KTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNG 546 (791)
T ss_dssp CSCCCEEEEETTTTEEEEEETTTTEEEEEETTSSSE---EEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTS
T ss_pred CCCcceeeeeecCCcEEEEecCCCeEEEEeCCCCeE---EEEEeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCC
Confidence 456778999988888888888889999999975431 112223345688999999877666654333 6888888874
Q ss_pred CCCcceeecCCCCCEEEEEEcCCCCcEEEEEeCCCeEEEeeCCCCCcccCCCccCCCCCeeeEEEcCCCCCcceEEeCCC
Q 014472 306 ISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPEDAEDGPPELLFIHGGHTSKISDFSWNPC 385 (424)
Q Consensus 306 ~~~~~~~~~~~~~~v~~~~~sp~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~ 385 (424)
......+...-.....|++++.+..|+++-...+.|..+++..... ..+....+.-....+|++.
T Consensus 547 -~~~~~lv~~~l~~P~GLavD~~~~~LYwaD~~~~~I~~~d~dG~~~------------~~v~~~~~~l~~P~glav~-- 611 (791)
T 3m0c_C 547 -VDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNR------------KTILEDEKRLAHPFSLAVF-- 611 (791)
T ss_dssp -CCEEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC------------EEEEECTTTTSSEEEEEEE--
T ss_pred -CceEEEEeCCCCCceEEEEecCCCeEEEEeCCCCcEEEEecCCCce------------EEEecCCCccCCCCEEEEe--
Confidence 2222223333357899999987766666666677899998864321 1121111112233455553
Q ss_pred CCcEEEEEeCCCcEEEEecCCC
Q 014472 386 EDWVISSVAEDNILQIWQMAEN 407 (424)
Q Consensus 386 ~~~~l~s~~~d~~i~iw~~~~~ 407 (424)
+.+++++-...+.|...+..++
T Consensus 612 ~~~lYwtD~~~~~I~~~dk~tG 633 (791)
T 3m0c_C 612 EDKVFWTDIINEAIFSANRLTG 633 (791)
T ss_dssp TTEEEEEETTTTEEEEEETTTC
T ss_pred CCEEEEEECCCCEEEEEeCCCC
Confidence 3346666666677777765444
No 259
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=98.43 E-value=0.00017 Score=72.55 Aligned_cols=199 Identities=8% Similarity=0.092 Sum_probs=112.1
Q ss_pred ceeEEEec-CCCCcEEEEEecCC----eEEEEeCCCCCCCCCCCCCCCCcEEEecCCCCeeeEEecCCCCceEEEEeCC-
Q 014472 127 EVNRARYM-PQNPFLIATKTVSA----EVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDD- 200 (424)
Q Consensus 127 ~v~~i~~~-p~~~~~latg~~dg----~v~iwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~d- 200 (424)
.+...+|+ |+|+.++.+...+| .|+++|+.+.. ..... .+.. ...+++|+|+++.++++ ..+
T Consensus 175 ~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~-------~~l~~-~~~~---~~~~~~WspDg~~l~y~-~~d~ 242 (751)
T 2xe4_A 175 DVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPS-------QTIAD-KVSG---TNGEIVWGPDHTSLFYV-TKDE 242 (751)
T ss_dssp EEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTT-------CCCCC-CEEE---ECSCCEECSSTTEEEEE-EECT
T ss_pred EEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCC-------EeCCc-cccC---ceeeEEEecCCCEEEEE-EECC
Confidence 57789999 99984444433333 59999998720 11111 1111 13578999999854444 443
Q ss_pred ----CcEEEEeCCCCCCCCcccceeeee-cCCcceeeEEeeCCCCcEEEEEeC--CCeEEEEECCCCCCCCC-eeEe-cc
Q 014472 201 ----AQICLWDINAAPKNKSLEAMQIFK-VHEGVVEDVAWHLRHEYLFGSVGD--DQYLLIWDLRTPSVSKP-VQSV-VA 271 (424)
Q Consensus 201 ----g~i~vwd~~~~~~~~~~~~~~~~~-~~~~~v~~i~~~~~~~~~~~s~~~--dg~i~i~d~~~~~~~~~-~~~~-~~ 271 (424)
..|.++++.++... ....+. ........+.|+|+++.++++... ...|.++|+.++.. .. +..+ ..
T Consensus 243 ~~~~~~v~~~~lgt~~~~----~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~~~-~~~~~~l~~~ 317 (751)
T 2xe4_A 243 TLRENKVWRHVMGKLQSE----DVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKGNA-HNTLEIVRPR 317 (751)
T ss_dssp TCCEEEEEEEETTSCGGG----CEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSCTT-CCCEEESSCC
T ss_pred CCCCCEEEEEECCCCchh----cEEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCCCCC-CceeEEeecC
Confidence 25777888654211 111222 122345678999999987766543 34588889887531 11 1222 22
Q ss_pred cCCCeeEEEecCCCCeEEEEEeCC----CcEEEEECCCCCCccee-ecCCCC--CEEEEEEcCCCCcEEEEEeCCCeEEE
Q 014472 272 HQSEVNCLAFNPFNEWILATGSTD----KTVKLFDLRKISTALHT-FDSHKE--EVFQVGWNPKNETILASCCLGRRLMV 344 (424)
Q Consensus 272 ~~~~v~~i~~~~~~~~~l~~g~~d----g~i~iwd~~~~~~~~~~-~~~~~~--~v~~~~~sp~~~~~l~s~~~dg~i~i 344 (424)
......++.|+. +..+++....+ ..|..+|+.+. ..... +..+.. .+..+.+. +..++++...++..+|
T Consensus 318 ~~~~~~s~~~~~-g~~l~~~t~~~~a~~~~L~~~d~~~~-~~~~~~li~~~~~~~l~~~~~~--~~~lv~~~~~~g~~~l 393 (751)
T 2xe4_A 318 EKGVRYDVQMHG-TSHLVILTNEGGAVNHKLLIAPRGQP-SDWSHVLVDHSEDVFMESIAVR--SNYLVVAGRRAGLTRI 393 (751)
T ss_dssp CTTCCEEEEEET-TTEEEEEECTTTCTTCEEEEEETTST-TCCCCEEECCCSSEEEEEEEEC--SSEEEEEEEETTEEEE
T ss_pred CCCceEEEeeee-CCEEEEEeCCCCCCCcEEEEEcCCCc-ccceeeEECCCCCcEEEEEEEE--CCEEEEEEEeCCEEEE
Confidence 345566676654 55556665554 25666776542 22222 333333 34455554 5567888888886555
Q ss_pred ee
Q 014472 345 WD 346 (424)
Q Consensus 345 wd 346 (424)
|-
T Consensus 394 ~~ 395 (751)
T 2xe4_A 394 WT 395 (751)
T ss_dssp EE
T ss_pred EE
Confidence 43
No 260
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.43 E-value=2.3e-05 Score=66.03 Aligned_cols=199 Identities=11% Similarity=0.073 Sum_probs=117.6
Q ss_pred cCCCC--eeeEEecCCCCceEEEEeCC--CcEEEEeCCCCCCCCcccceeeeecCCcceeeEEeeCCCCcEEEEEeCCCe
Q 014472 176 GHSTE--GYGLSWSKFKEGHLLSGSDD--AQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQY 251 (424)
Q Consensus 176 ~h~~~--v~~l~~~~~~~~~l~s~~~d--g~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~~s~~~dg~ 251 (424)
.|... ..+|.|++ + .++.+.+.. ..|+.+|+.+++... .... ............+..+++..-.++.
T Consensus 16 phd~~~ftqGL~~~~-~-~LyestG~~g~S~v~~vD~~tgkv~~------~~~l-~~~~fgeGi~~~~~~ly~ltw~~~~ 86 (243)
T 3mbr_X 16 PHDTTAFTEGLFYLR-G-HLYESTGETGRSSVRKVDLETGRILQ------RAEV-PPPYFGAGIVAWRDRLIQLTWRNHE 86 (243)
T ss_dssp ECCTTCCEEEEEEET-T-EEEEEECCTTSCEEEEEETTTCCEEE------EEEC-CTTCCEEEEEEETTEEEEEESSSSE
T ss_pred CCCCccccccEEEEC-C-EEEEECCCCCCceEEEEECCCCCEEE------EEeC-CCCcceeEEEEeCCEEEEEEeeCCE
Confidence 45543 56899986 3 356666665 489999999874322 2211 1122222222335678877788999
Q ss_pred EEEEECCCCCCCCCeeEecccCCCeeEEEecCCCCeEEEEEeCCCcEEEEECCCCCCcceeecCC--C---CCEEEEEEc
Q 014472 252 LLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATGSTDKTVKLFDLRKISTALHTFDSH--K---EEVFQVGWN 326 (424)
Q Consensus 252 i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~--~---~~v~~~~~s 326 (424)
+.+||..+.+. +.++.... .-..++ +++..++++ ..++.|.++|..+ .+.+.++... . ..++.+.|.
T Consensus 87 v~v~D~~tl~~---~~ti~~~~-~Gwglt--~dg~~L~vS-dgs~~l~~iDp~t-~~~~~~I~V~~~g~~~~~lNeLe~~ 158 (243)
T 3mbr_X 87 GFVYDLATLTP---RARFRYPG-EGWALT--SDDSHLYMS-DGTAVIRKLDPDT-LQQVGSIKVTAGGRPLDNLNELEWV 158 (243)
T ss_dssp EEEEETTTTEE---EEEEECSS-CCCEEE--ECSSCEEEE-CSSSEEEEECTTT-CCEEEEEECEETTEECCCEEEEEEE
T ss_pred EEEEECCcCcE---EEEEeCCC-CceEEe--eCCCEEEEE-CCCCeEEEEeCCC-CeEEEEEEEccCCcccccceeeEEe
Confidence 99999998654 55554322 234555 446655544 5588999999988 4555555431 1 345677776
Q ss_pred CCCCcEEEEEeCCCeEEEeeCCCCCcccCCCccCCCCCeeeEEEcCCCCCcceEEeCCCCCcEEEEEe
Q 014472 327 PKNETILASCCLGRRLMVWDLSRIDEEQTPEDAEDGPPELLFIHGGHTSKISDFSWNPCEDWVISSVA 394 (424)
Q Consensus 327 p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~ 394 (424)
++ .+++..-.+..|.+.|..++..........-.+.... .-..-....+.++|+|++..+++||-
T Consensus 159 -~G-~lyanvw~s~~I~vIDp~tG~V~~~idl~~l~~~~~~-~~~~~~~vlNGIA~d~~~~~lfVTGK 223 (243)
T 3mbr_X 159 -NG-ELLANVWLTSRIARIDPASGKVVAWIDLQALVPDADA-LTDSTNDVLNGIAFDAEHDRLFVTGK 223 (243)
T ss_dssp -TT-EEEEEETTTTEEEEECTTTCBEEEEEECGGGSTTTTS-CCCTTSSCEEEEEEETTTTEEEEEET
T ss_pred -CC-EEEEEECCCCeEEEEECCCCCEEEEEECCcCcccccc-ccCCcCCceEEEEEcCCCCEEEEECC
Confidence 45 3666665677899999998764332211100000000 00011235688999999887777764
No 261
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=98.43 E-value=8.2e-05 Score=73.86 Aligned_cols=97 Identities=6% Similarity=0.021 Sum_probs=62.1
Q ss_pred CCcEEEEECCCCCCcceeecCCCCCEEEEEEcCCCCcEEEEEeCCCeEEEeeCCCCCcccCCCccCCCCCeeeEEEcCC-
Q 014472 295 DKTVKLFDLRKISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPEDAEDGPPELLFIHGGH- 373 (424)
Q Consensus 295 dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h- 373 (424)
+|.|..||+++ ++.+-.+..+. ++....+...+. +++.++.||.++.||.++++ .+..+...
T Consensus 454 ~g~l~A~D~~t-G~~~W~~~~~~-~~~~g~~~tagg-lvf~gt~dg~l~a~D~~tG~--------------~lw~~~~~~ 516 (689)
T 1yiq_A 454 SGKLIAWDPVK-QQAAWEVPYVT-IFNGGTLSTAGN-LVFEGSADGRVIAYAADTGE--------------KLWEQPAAS 516 (689)
T ss_dssp EEEEEEEETTT-TEEEEEEEESS-SCCCCEEEETTT-EEEEECTTSEEEEEETTTCC--------------EEEEEECSS
T ss_pred ceeEEEEECCC-CCeEeEccCCC-CccCccceECCC-EEEEECCCCcEEEEECCCCc--------------cceeeeCCC
Confidence 37799999998 66666655433 333334555554 78889999999999999873 34444432
Q ss_pred CCCcceEEeCCCCCcEEEEEeC--------------------CCcEEEEecCCCC
Q 014472 374 TSKISDFSWNPCEDWVISSVAE--------------------DNILQIWQMAENI 408 (424)
Q Consensus 374 ~~~v~~~~~~~~~~~~l~s~~~--------------------d~~i~iw~~~~~~ 408 (424)
.....-+.|..+|+..+++.+. .+.+.+|.+..+.
T Consensus 517 ~~~~~p~ty~~~G~qyv~~~~G~gg~~~~~~~~~~~~~~~~~g~~~~~f~l~~~~ 571 (689)
T 1yiq_A 517 GVMAAPVTYSVDGEQYVTFMAGWGGAFSTFAGALSLRAGVQPYAQVLTYKLGGTA 571 (689)
T ss_dssp CCCSCCEEEEETTEEEEEEEECCCTTHHHHTHHHHGGGCCCCCCEEEEEEETCCC
T ss_pred CcccCceEEEECCEEEEEEEecCCccccccccccccccccCCCceEEEeecCCcc
Confidence 2223447777888754544332 2367888887654
No 262
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=98.39 E-value=0.0011 Score=59.09 Aligned_cols=205 Identities=7% Similarity=0.011 Sum_probs=132.4
Q ss_pred ceeEEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCCeeeEEecCCCCceEEEEeCCCcEEEE
Q 014472 127 EVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDDAQICLW 206 (424)
Q Consensus 127 ~v~~i~~~p~~~~~latg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vw 206 (424)
.+.+++|.+.+..++.+-...+.|..++.... ......+...-....++++.+.+..++++-...+.|.++
T Consensus 36 ~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~---------~~~~~~~~~~l~~p~glavd~~~g~ly~~d~~~~~I~~~ 106 (318)
T 3sov_A 36 DAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKT---------ESVQNVVVSGLLSPDGLACDWLGEKLYWTDSETNRIEVS 106 (318)
T ss_dssp EEEEEEEEGGGTEEEEEETTTTEEEEEETTSS---------SCCCEEEEECCSCCCEEEEETTTTEEEEEETTTTEEEEE
T ss_pred ccEEEEEEeCCCEEEEEECCCCcEEEEEccCC---------CceEEEEcCCCCCccEEEEEcCCCeEEEEECCCCEEEEE
Confidence 56789999876667777777889999998761 111122222334566788887666555665667899999
Q ss_pred eCCCCCCCCcccceeeeecCCcceeeEEeeCCCCcEEEEEe-CCCeEEEEECCCCCCCCCeeEecccCCCeeEEEecCCC
Q 014472 207 DINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVG-DDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFN 285 (424)
Q Consensus 207 d~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~~s~~-~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~~~~ 285 (424)
++..... .............+++.|.+..++.+-. ..+.|...++..... .......-...+.|+++|++
T Consensus 107 ~~dG~~~------~~l~~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~---~~~~~~~l~~Pnglavd~~~ 177 (318)
T 3sov_A 107 NLDGSLR------KVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSR---FIIINSEIYWPNGLTLDYEE 177 (318)
T ss_dssp ETTSCSC------EEEECSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSCSC---EEEECSSCSCEEEEEEETTT
T ss_pred ECCCCcE------EEEEeCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCCe---EEEEECCCCCccEEEEeccC
Confidence 9865321 1111223456789999998777776652 367888888865331 11112223457899999988
Q ss_pred CeEEEEEeCCCcEEEEECCCCCCcceeecCCCCCEEEEEEcCCCCcEEEEEeCCCeEEEeeCCCCCc
Q 014472 286 EWILATGSTDKTVKLFDLRKISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDE 352 (424)
Q Consensus 286 ~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~s~~~dg~i~iwd~~~~~~ 352 (424)
..+.++=...+.|..+|+.. ................+++.. ..++.+-...+.|..++..++..
T Consensus 178 ~~lY~aD~~~~~I~~~d~dG-~~~~~~~~~~~~~P~glav~~--~~lywtd~~~~~V~~~~~~~G~~ 241 (318)
T 3sov_A 178 QKLYWADAKLNFIHKSNLDG-TNRQAVVKGSLPHPFALTLFE--DILYWTDWSTHSILACNKYTGEG 241 (318)
T ss_dssp TEEEEEETTTTEEEEEETTS-CSCEEEECSCCSCEEEEEEET--TEEEEEETTTTEEEEEETTTCCS
T ss_pred CEEEEEECCCCEEEEEcCCC-CceEEEecCCCCCceEEEEeC--CEEEEEecCCCeEEEEECCCCCc
Confidence 87777766778999999874 222222232345567777753 34677777778899999876654
No 263
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=98.38 E-value=0.0011 Score=58.96 Aligned_cols=209 Identities=8% Similarity=0.022 Sum_probs=131.5
Q ss_pred ccCCceeEEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCCeeeEEecCCCCceEEEEeCCCc
Q 014472 123 NHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDDAQ 202 (424)
Q Consensus 123 ~h~~~v~~i~~~p~~~~~latg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~ 202 (424)
.....+..++|.+.+..++.+-...+.|..++...... + ......+...-....++++.+.+..++++-...+.
T Consensus 27 ~~~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~-----~-~~~~~~~~~~~~~p~glavd~~~~~ly~~d~~~~~ 100 (316)
T 1ijq_A 27 PNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHG-----V-SSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGT 100 (316)
T ss_dssp CSCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------------CEEEECSSCSCCCEEEEETTTTEEEEEETTTTE
T ss_pred cCCCceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCC-----C-cccEEEEeCCCCCcCEEEEeecCCeEEEEECCCCE
Confidence 34456789999987766777777788999999864100 0 01111222222345788887656645556566789
Q ss_pred EEEEeCCCCCCCCcccceeeeecCCcceeeEEeeCCCCcEEEEEeCC-CeEEEEECCCCCCCCCeeEe-cccCCCeeEEE
Q 014472 203 ICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDD-QYLLIWDLRTPSVSKPVQSV-VAHQSEVNCLA 280 (424)
Q Consensus 203 i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~~s~~~d-g~i~i~d~~~~~~~~~~~~~-~~~~~~v~~i~ 280 (424)
|.+.++..... .............++++|.+..++.+.... +.|..+++.... ...+ ...-...+.|+
T Consensus 101 I~~~~~~g~~~------~~~~~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG~~----~~~~~~~~~~~P~gla 170 (316)
T 1ijq_A 101 VSVADTKGVKR------KTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVD----IYSLVTENIQWPNGIT 170 (316)
T ss_dssp EEEEETTSSSE------EEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCC----EEEEECSSCSCEEEEE
T ss_pred EEEEeCCCCce------EEEEECCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCCCCC----eEEEEECCCCCceEEE
Confidence 99999864311 111222335678999999877787665444 789888886432 2222 12234678999
Q ss_pred ecCCCCeEEEEEeCCCcEEEEECCCCCCcceee-c--CCCCCEEEEEEcCCCCcEEEEEeCCCeEEEeeCCCCC
Q 014472 281 FNPFNEWILATGSTDKTVKLFDLRKISTALHTF-D--SHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRID 351 (424)
Q Consensus 281 ~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~-~--~~~~~v~~~~~sp~~~~~l~s~~~dg~i~iwd~~~~~ 351 (424)
+++++..++++-...+.|..+|+.. . ....+ . ..-.....+++.. ..++.+-...+.|..++..++.
T Consensus 171 ~d~~~~~lY~~D~~~~~I~~~d~dg-~-~~~~~~~~~~~~~~P~giav~~--~~ly~~d~~~~~V~~~~~~~g~ 240 (316)
T 1ijq_A 171 LDLLSGRLYWVDSKLHSISSIDVNG-G-NRKTILEDEKRLAHPFSLAVFE--DKVFWTDIINEAIFSANRLTGS 240 (316)
T ss_dssp EETTTTEEEEEETTTTEEEEEETTS-C-SCEEEEECTTTTSSEEEEEEET--TEEEEEETTTTEEEEEETTTCC
T ss_pred EeccCCEEEEEECCCCeEEEEecCC-C-ceEEEeecCCccCCcEEEEEEC--CEEEEEECCCCeEEEEeCCCCc
Confidence 9998887777766778999999874 2 22222 1 1224567788753 3567777778889999876654
No 264
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=98.35 E-value=0.00042 Score=64.59 Aligned_cols=255 Identities=6% Similarity=-0.030 Sum_probs=139.6
Q ss_pred ceeEEEecCC--CCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCCeeeEEecCCCCceEEEEeCC---C
Q 014472 127 EVNRARYMPQ--NPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDD---A 201 (424)
Q Consensus 127 ~v~~i~~~p~--~~~~latg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~d---g 201 (424)
....|+|.|+ +..++++ ...+.|+.++... .....+........+|++++++. ++++.... .
T Consensus 140 ~P~gvavd~~s~~g~Lyv~-D~~~~I~~id~~~-----------g~v~~~~~~~~~P~giavd~dG~-lyVad~~~~~~~ 206 (433)
T 4hw6_A 140 NIWRMMFDPNSNYDDLYWV-GQRDAFRHVDFVN-----------QYVDIKTTNIGQCADVNFTLNGD-MVVVDDQSSDTN 206 (433)
T ss_dssp CCCEEEECTTTTTCEEEEE-CBTSCEEEEETTT-----------TEEEEECCCCSCEEEEEECTTCC-EEEEECCSCTTS
T ss_pred CCceEEEccccCCCEEEEE-eCCCCEEEEECCC-----------CEEEEeecCCCCccEEEECCCCC-EEEEcCCCCccc
Confidence 4668999984 3435544 3338899999855 11233333445688999999887 55554321 1
Q ss_pred -cEEEEeCCCCCCCCcccceeeeecCCcceeeEEeeCCCCcEEEEEeCCCeEEEEECCCCCCCCCeeEecccCCCeeEEE
Q 014472 202 -QICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLA 280 (424)
Q Consensus 202 -~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~ 280 (424)
.+...+...... . ...+. .......++++|.+..++++-..++.|+.+|..++.....+... ........|+
T Consensus 207 ~gv~~~~~~~~~~-~----~~~~~-~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~-~~~~~~~~ia 279 (433)
T 4hw6_A 207 TGIYLFTRASGFT-E----RLSLC-NARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMM-DTKGSNFHIV 279 (433)
T ss_dssp EEEEEECGGGTTC-C----EEEEE-ECSSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEEC-SCCSSCEEEE
T ss_pred ceEEEEECCCCee-c----ccccc-ccCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEecc-CCCCCcccEE
Confidence 133333321110 0 01111 23456788999955567766667788999998755420111111 1122234699
Q ss_pred ecCCCCeEEEEEeCCCcEEEEECCCCCCc---ceeecCC---------------CCCEEEEEE---------cCCCCcEE
Q 014472 281 FNPFNEWILATGSTDKTVKLFDLRKISTA---LHTFDSH---------------KEEVFQVGW---------NPKNETIL 333 (424)
Q Consensus 281 ~~~~~~~~l~~g~~dg~i~iwd~~~~~~~---~~~~~~~---------------~~~v~~~~~---------sp~~~~~l 333 (424)
|+|++.+++++-...+.|+.+++...... ...+.+. -.....+++ .+++ .++
T Consensus 280 ~dpdG~~LYvad~~~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~~g-~ly 358 (433)
T 4hw6_A 280 WHPTGDWAYIIYNGKHCIYRVDYNRETGKLAVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEEDEY-DFY 358 (433)
T ss_dssp ECTTSSEEEEEETTTTEEEEEEBCTTTCCBCCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSSCCE-EEE
T ss_pred EeCCCCEEEEEeCCCCEEEEEeCCCCCcccCcEEEEEecCCCCccCCCcccceEEcCCccEEEEccccccccCCCC-cEE
Confidence 99999866666667789999887531111 1122111 123567888 6666 466
Q ss_pred EEEeCCCeEEEeeCCCCCcccCCCccCCC-CCeeeEE-E--cCCCCCcceEEeC-CCCCcEEEEEeCCCcEEEEecC
Q 014472 334 ASCCLGRRLMVWDLSRIDEEQTPEDAEDG-PPELLFI-H--GGHTSKISDFSWN-PCEDWVISSVAEDNILQIWQMA 405 (424)
Q Consensus 334 ~s~~~dg~i~iwd~~~~~~~~~~~~~~~~-~~~~~~~-~--~~h~~~v~~~~~~-~~~~~~l~s~~~d~~i~iw~~~ 405 (424)
++-...+.|+.++.. +. .......... ..-..-- . ...-.....++++ +++. ++++-..++.|+..++.
T Consensus 359 vaD~~n~~I~~~~~~-G~-v~t~~G~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~-lyVaD~~n~rIr~i~~e 432 (433)
T 4hw6_A 359 FCDRDSHTVRVLTPE-GR-VTTYAGRGNSREWGYVDGELRSQALFNHPTSIAYDMKRKC-FYIGDCDNHRVRKIAPE 432 (433)
T ss_dssp EEETTTTEEEEECTT-SE-EEEEECCCTTCSSCCBCEETTTTCBCSSEEEEEEETTTTE-EEEEEGGGTEEEEEEEC
T ss_pred EEECCCCEEEEECCC-CC-EEEEEeCCCCCccccCCCccccccEeCCCcEEEEECCCCE-EEEEeCCCCEEEEEecC
Confidence 666667889888752 21 1000000000 0000000 0 0011236789999 5665 77776777888888764
No 265
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=98.35 E-value=0.00032 Score=65.36 Aligned_cols=242 Identities=7% Similarity=0.040 Sum_probs=137.4
Q ss_pred ceeEEEecC-CCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCCeeeEEecCCCCceEEEEeC-CC---
Q 014472 127 EVNRARYMP-QNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSD-DA--- 201 (424)
Q Consensus 127 ~v~~i~~~p-~~~~~latg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~-dg--- 201 (424)
....|+++| ++..++++-. .+.|+.+|... ..+..+.........|+|++++.. |+.+.. ++
T Consensus 138 ~P~~lavdp~~~g~Lyv~d~-~~~I~~id~~~-----------~~v~~~~~~~~~P~~ia~d~~G~~-lyvad~~~~~~~ 204 (430)
T 3tc9_A 138 GAVWLSFDPKNHNHLYLVGE-QHPTRLIDFEK-----------EYVSTVYSGLSKVRTICWTHEADS-MIITNDQNNNDR 204 (430)
T ss_dssp CCCEEEEETTEEEEEEEEEB-TEEEEEEETTT-----------TEEEEEECCCSCEEEEEECTTSSE-EEEEECCSCTTS
T ss_pred CCCEEEECCCCCCeEEEEeC-CCcEEEEECCC-----------CEEEEEecCCCCcceEEEeCCCCE-EEEEeCCCCccc
Confidence 457889998 3444555433 37888888875 123334344556889999998874 544443 22
Q ss_pred -cEEEEeCCCCCCCCcccceeeeecCCcceeeEEeeCCCCcEEEEEeCCCeEEEEECCCCCCCCCeeEecccCCCeeEEE
Q 014472 202 -QICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLA 280 (424)
Q Consensus 202 -~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~ 280 (424)
.+.+.+.. +... ....+. .......++++|++..++++-..++.|..++...... ..+... ......+.|+
T Consensus 205 ~~v~~~~~~-g~~~----~~~~l~-~~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~-~~~~~~-~~~~~P~gia 276 (430)
T 3tc9_A 205 PNNYILTRE-SGFK----VITELT-KGQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQET-TPLFTI-QDSGWEFHIQ 276 (430)
T ss_dssp EEEEEEEGG-GTSC----SEEEEE-ECSSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEE-EEEEEC-SSSSCCEEEE
T ss_pred ceEEEEeCC-Ccee----eeeeec-cCCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcE-EEEEEc-CCCCcceeEE
Confidence 23334432 2111 011121 1234678899995556777777788999999876431 011111 1123578899
Q ss_pred ecCCCCeEEEEEeCCCcEEEEECCCCCCc---ceeecCC---------------CCCEE-EEEEc--------CCCCcEE
Q 014472 281 FNPFNEWILATGSTDKTVKLFDLRKISTA---LHTFDSH---------------KEEVF-QVGWN--------PKNETIL 333 (424)
Q Consensus 281 ~~~~~~~~l~~g~~dg~i~iwd~~~~~~~---~~~~~~~---------------~~~v~-~~~~s--------p~~~~~l 333 (424)
|+|++++++++-...+.|..++....... +..+.+. -.... .++.. +++ .++
T Consensus 277 ~~pdG~~lyv~d~~~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~~gv~v~~~~y~~~D~~g-~ly 355 (430)
T 3tc9_A 277 FHPSGNYAYIVVVNQHYILRSDYDWKTKRLTTPYIVCGQQGAKDWVDGVGKKARMHAPRQGTFVKNPAYKGSSDEY-DFY 355 (430)
T ss_dssp ECTTSSEEEEEETTTTEEEEEEEETTTTEECCCEEEEECTTCBCCBCEEGGGCBBSSEEEEEEEECGGGTTSSCCE-EEE
T ss_pred EcCCCCEEEEEECCCCEEEEEeCCcccccccceEEEeccCCCCCCCCCCCcceEeCCCcceEEEccccccccCCCC-eEE
Confidence 99999876777677889999887631111 1111111 01122 44443 334 355
Q ss_pred EEEeCCCeEEEeeCCCCCcccCCCccCCCCCeeeEEEc-------C----------CCCCcceEEeCCCCCcEEEEEeCC
Q 014472 334 ASCCLGRRLMVWDLSRIDEEQTPEDAEDGPPELLFIHG-------G----------HTSKISDFSWNPCEDWVISSVAED 396 (424)
Q Consensus 334 ~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~-------~----------h~~~v~~~~~~~~~~~~l~s~~~d 396 (424)
++-...+.|+.++.. + .+..... + .-.....++++|++..++++-..+
T Consensus 356 vaD~~n~~I~~i~~~-G--------------~v~~~~g~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n 420 (430)
T 3tc9_A 356 FCDRENHCIRILTPQ-G--------------RVTTFAGRGSNGTSGYNDGDLRQEARFNHPEGIVYDEERECFFIGDREN 420 (430)
T ss_dssp EEEGGGTEEEEECTT-S--------------EEEEEEECCTTSSSSCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGG
T ss_pred EEECCCcEEEEECCC-C--------------cEEEEEeCCCCCCCcccCCCchhhcEeCCCcEEEEECCCCEEEEEECCC
Confidence 555556778887732 2 1111110 0 012467899999544377777777
Q ss_pred CcEEEEecC
Q 014472 397 NILQIWQMA 405 (424)
Q Consensus 397 ~~i~iw~~~ 405 (424)
+.|+..++.
T Consensus 421 ~rIr~i~~e 429 (430)
T 3tc9_A 421 RRIRKIGYE 429 (430)
T ss_dssp TEEEEEEEC
T ss_pred CeEEEEccC
Confidence 888888764
No 266
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=98.33 E-value=0.00063 Score=68.13 Aligned_cols=211 Identities=7% Similarity=0.029 Sum_probs=130.3
Q ss_pred cCCceeEEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCCeeeEEecCCCCceEEEEeCCCcE
Q 014472 124 HDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDDAQI 203 (424)
Q Consensus 124 h~~~v~~i~~~p~~~~~latg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i 203 (424)
....+..|+|.+.+..++.+-...+.|+.+++..... .......+........+|++.+.+..++++-...+.|
T Consensus 422 ~~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~------~~~~~~vi~~~l~~P~GLAvD~~~~~LY~tD~~~~~I 495 (791)
T 3m0c_C 422 NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHG------VSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTV 495 (791)
T ss_dssp SCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------------CEEEECSSCSCCCEEEEETTTTEEEEEETTTTEE
T ss_pred CCCceEEEeecccCCeeEEeeccceeEEEEeccCCCC------CcceeEEEecCCCCcceeeeeecCCcEEEEecCCCeE
Confidence 3456778889886666777777778888888765110 0011222332345567888887776566666678899
Q ss_pred EEEeCCCCCCCCcccceeeeecCCcceeeEEeeCCCCcEEEEEeCC-CeEEEEECCCCCCCCCeeEecccCCCeeEEEec
Q 014472 204 CLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDD-QYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFN 282 (424)
Q Consensus 204 ~vwd~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~~s~~~d-g~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~ 282 (424)
.+.++..... ...+.........|+++|.+..|+.+-... +.|.+.++..... ...+...-...+.|+++
T Consensus 496 ~v~~ldG~~~------~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~~---~~lv~~~l~~P~GLavD 566 (791)
T 3m0c_C 496 SVADTKGVKR------KTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDI---YSLVTENIQWPNGITLD 566 (791)
T ss_dssp EEEETTSSSE------EEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCE---EEEECSSCSCEEEEEEE
T ss_pred EEEeCCCCeE------EEEEeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCCce---EEEEeCCCCCceEEEEe
Confidence 9999875321 111222334688999999877787665333 7899998875331 22222233578899999
Q ss_pred CCCCeEEEEEeCCCcEEEEECCCCCCcceeecC--CCCCEEEEEEcCCCCcEEEEEeCCCeEEEeeCCCCCc
Q 014472 283 PFNEWILATGSTDKTVKLFDLRKISTALHTFDS--HKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDE 352 (424)
Q Consensus 283 ~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~--~~~~v~~~~~sp~~~~~l~s~~~dg~i~iwd~~~~~~ 352 (424)
+.+..|+++=...+.|..+|+.. ......+.. .-.....|++. +..++++-...+.|...+..++..
T Consensus 567 ~~~~~LYwaD~~~~~I~~~d~dG-~~~~~v~~~~~~l~~P~glav~--~~~lYwtD~~~~~I~~~dk~tG~~ 635 (791)
T 3m0c_C 567 LLSGRLYWVDSKLHSISSIDVNG-GNRKTILEDEKRLAHPFSLAVF--EDKVFWTDIINEAIFSANRLTGSD 635 (791)
T ss_dssp TTTTEEEEEETTTTEEEEEETTS-CSCEEEEECTTTTSSEEEEEEE--TTEEEEEETTTTEEEEEETTTCCC
T ss_pred cCCCeEEEEeCCCCcEEEEecCC-CceEEEecCCCccCCCCEEEEe--CCEEEEEECCCCEEEEEeCCCCcc
Confidence 88876666655667899999875 222222222 12244566664 335666766778888888766543
No 267
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=98.32 E-value=0.002 Score=65.17 Aligned_cols=242 Identities=8% Similarity=0.035 Sum_probs=147.3
Q ss_pred CCceeEEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEec--------CCCCeeeEEecCCCCceEEE
Q 014472 125 DGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRG--------HSTEGYGLSWSKFKEGHLLS 196 (424)
Q Consensus 125 ~~~v~~i~~~p~~~~~latg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~--------h~~~v~~l~~~~~~~~~l~s 196 (424)
...|.++...+++. |-.|+.++-+.+|+.... ....+.. ....|.++...+++. |..
T Consensus 214 ~~~i~~i~~d~~g~--lwigt~~~Gl~~~~~~~~-----------~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~--lWi 278 (795)
T 4a2l_A 214 TKQIQAILQQSPTR--IWVATEGAGLFLINPKTK-----------EIKNYLHSPSNPKSISSNYIRSLAMDSQNR--LWI 278 (795)
T ss_dssp CCCEEEEEEEETTE--EEEEEBSSCEEEEETTTT-----------EEEEECCCTTCTTSCSCSBEEEEEECTTSC--EEE
T ss_pred CCeeEEEEEcCCCC--EEEEECCCCeEEEeCCCC-----------eEEEeecCCCCccccCCCeEEEEEEcCCCC--EEE
Confidence 45688888877664 333454445888887651 1111111 134688998887665 555
Q ss_pred EeCCCcEEEEeCCCCCCCCcccceee-----eecCCcceeeEEeeCCCCcEEEEEeCCCeEEEEECCCCCCCCCeeEec-
Q 014472 197 GSDDAQICLWDINAAPKNKSLEAMQI-----FKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVV- 270 (424)
Q Consensus 197 ~~~dg~i~vwd~~~~~~~~~~~~~~~-----~~~~~~~v~~i~~~~~~~~~~~s~~~dg~i~i~d~~~~~~~~~~~~~~- 270 (424)
|+.+ -|.+|+..+... ..... ..-....|.++...+++. +. .|+.++-|..|+...... ..+.
T Consensus 279 gt~~-Gl~~~~~~~~~~----~~~~~~~~~~~~l~~~~i~~i~~D~~g~-lW-igt~~~Gl~~~~~~~~~~----~~~~~ 347 (795)
T 4a2l_A 279 GTFN-DLNIYHEGTDSF----ASYSSNPVENGSLSQRSVRSIFMDSQGG-MW-LGTYFGGLNYYHPIRNRF----KNIRN 347 (795)
T ss_dssp EESS-CEEEEETTTTEE----EEECCCTTSTTSCSSSCEEEEEECTTSC-EE-EEESSSCEEEECGGGGSS----EEECC
T ss_pred EeCC-hhheEcCCCCeE----EEEecCCCCCCCCCCCcEEEEEEeCCcC-EE-EEECCCCeEEeCCCcccc----eEEcC
Confidence 6655 588898765421 11100 011235799999988875 44 566777789998765431 1111
Q ss_pred ------ccCCCeeEEEecCCCCeEEEEEeCCCcEEEEECCCCCCcceeec---------CCCCCEEEEEEcCCCCcEEEE
Q 014472 271 ------AHQSEVNCLAFNPFNEWILATGSTDKTVKLFDLRKISTALHTFD---------SHKEEVFQVGWNPKNETILAS 335 (424)
Q Consensus 271 ------~~~~~v~~i~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~---------~~~~~v~~~~~sp~~~~~l~s 335 (424)
.....|.++..++++. |..|+.++-|..||..+ +. ...+. .....|.++...+++. +|..
T Consensus 348 ~~~~~~l~~~~V~~i~~d~~g~--lWiGt~~~Gl~~~~~~~-~~-~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~-~lWi 422 (795)
T 4a2l_A 348 IPYKNSLSDNVVSCIVEDKDKN--LWIGTNDGGLNLYNPIT-QR-FTSYTLQEDESARGIGSNNIKAVYVDEKKS-LVYI 422 (795)
T ss_dssp CTTSSSCSCSSEEEEEECTTSC--EEEEESSSCEEEECTTT-CC-EEEECCC------CCSCSCEEEEEEETTTT-EEEE
T ss_pred CCCCCCCCCCeeEEEEECCCCC--EEEEECCCCeEEEcCCC-Cc-EEEEecCCCCcccCCCCccEEEEEEcCCCC-EEEE
Confidence 1245699999998876 66788887899999875 22 22221 1245789999988884 3556
Q ss_pred EeCCCeEEEeeCCCCCcccCCCccCCCCCeeeEEEcCCCCCcceEEeCCCCCcEEEEEeCCCcEEEEecCCCCCC
Q 014472 336 CCLGRRLMVWDLSRIDEEQTPEDAEDGPPELLFIHGGHTSKISDFSWNPCEDWVISSVAEDNILQIWQMAENIYH 410 (424)
Q Consensus 336 ~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~~ 410 (424)
|+.++-|.+||..++........ .+ ......|.++...+++. +.+.+ .+ -|.+|+..++.+.
T Consensus 423 gt~~~Gl~~~d~~~~~~~~~~~~----~~------~l~~~~v~~i~~d~~g~-lwigt-~~-Gl~~~~~~~~~~~ 484 (795)
T 4a2l_A 423 GTHAGGLSILHRNSGQVENFNQR----NS------QLVNENVYAILPDGEGN-LWLGT-LS-ALVRFNPEQRSFT 484 (795)
T ss_dssp EETTTEEEEEETTTCCEEEECTT----TS------CCSCSCEEEEEECSSSC-EEEEE-SS-CEEEEETTTTEEE
T ss_pred EeCcCceeEEeCCCCcEEEeecC----CC------CcCCCeeEEEEECCCCC-EEEEe-cC-ceeEEeCCCCeEE
Confidence 67766799999876432110000 00 01234688899888888 45544 34 4888998876543
No 268
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=98.32 E-value=0.001 Score=67.35 Aligned_cols=244 Identities=8% Similarity=0.066 Sum_probs=147.8
Q ss_pred CceeEEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEe--------cCCCCeeeEEecCCCCceEEEE
Q 014472 126 GEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLR--------GHSTEGYGLSWSKFKEGHLLSG 197 (424)
Q Consensus 126 ~~v~~i~~~p~~~~~latg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~--------~h~~~v~~l~~~~~~~~~l~s~ 197 (424)
..|.++...+++. |..|+.. -|.+|+.... ....+. -....|.++...+++. |-.|
T Consensus 263 ~~i~~i~~d~~g~--lWigt~~-Gl~~~~~~~~-----------~~~~~~~~~~~~~~l~~~~i~~i~~D~~g~--lWig 326 (795)
T 4a2l_A 263 NYIRSLAMDSQNR--LWIGTFN-DLNIYHEGTD-----------SFASYSSNPVENGSLSQRSVRSIFMDSQGG--MWLG 326 (795)
T ss_dssp SBEEEEEECTTSC--EEEEESS-CEEEEETTTT-----------EEEEECCCTTSTTSCSSSCEEEEEECTTSC--EEEE
T ss_pred CeEEEEEEcCCCC--EEEEeCC-hhheEcCCCC-----------eEEEEecCCCCCCCCCCCcEEEEEEeCCcC--EEEE
Confidence 5688999888776 3344455 4888887651 111111 1234688998887665 7778
Q ss_pred eCCCcEEEEeCCCCCCCCccccee-eeecCCcceeeEEeeCCCCcEEEEEeCCCeEEEEECCCCCCCCCeeEec------
Q 014472 198 SDDAQICLWDINAAPKNKSLEAMQ-IFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVV------ 270 (424)
Q Consensus 198 ~~dg~i~vwd~~~~~~~~~~~~~~-~~~~~~~~v~~i~~~~~~~~~~~s~~~dg~i~i~d~~~~~~~~~~~~~~------ 270 (424)
+.++-|..|+....... .+.... .-.-....|.++...+++. +. .|+.++-|..||..++. +..+.
T Consensus 327 t~~~Gl~~~~~~~~~~~-~~~~~~~~~~l~~~~V~~i~~d~~g~-lW-iGt~~~Gl~~~~~~~~~----~~~~~~~~~~~ 399 (795)
T 4a2l_A 327 TYFGGLNYYHPIRNRFK-NIRNIPYKNSLSDNVVSCIVEDKDKN-LW-IGTNDGGLNLYNPITQR----FTSYTLQEDES 399 (795)
T ss_dssp ESSSCEEEECGGGGSSE-EECCCTTSSSCSCSSEEEEEECTTSC-EE-EEESSSCEEEECTTTCC----EEEECCC----
T ss_pred ECCCCeEEeCCCcccce-EEcCCCCCCCCCCCeeEEEEECCCCC-EE-EEECCCCeEEEcCCCCc----EEEEecCCCCc
Confidence 88788999987543210 000000 0001235688998888775 54 56777779999987654 22221
Q ss_pred ---ccCCCeeEEEecCCCCeEEEEEeCCCcEEEEECCCCCCcceeec-----CCCCCEEEEEEcCCCCcEEEEEeCCCeE
Q 014472 271 ---AHQSEVNCLAFNPFNEWILATGSTDKTVKLFDLRKISTALHTFD-----SHKEEVFQVGWNPKNETILASCCLGRRL 342 (424)
Q Consensus 271 ---~~~~~v~~i~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~-----~~~~~v~~~~~sp~~~~~l~s~~~dg~i 342 (424)
.....|.++...+++. +|..|+.++-|.+||..+ +. +..+. .+...|.++...+++. +.+ |+.+| |
T Consensus 400 ~~~l~~~~v~~i~~d~~g~-~lWigt~~~Gl~~~d~~~-~~-~~~~~~~~~~l~~~~v~~i~~d~~g~-lwi-gt~~G-l 473 (795)
T 4a2l_A 400 ARGIGSNNIKAVYVDEKKS-LVYIGTHAGGLSILHRNS-GQ-VENFNQRNSQLVNENVYAILPDGEGN-LWL-GTLSA-L 473 (795)
T ss_dssp --CCSCSCEEEEEEETTTT-EEEEEETTTEEEEEETTT-CC-EEEECTTTSCCSCSCEEEEEECSSSC-EEE-EESSC-E
T ss_pred ccCCCCccEEEEEEcCCCC-EEEEEeCcCceeEEeCCC-Cc-EEEeecCCCCcCCCeeEEEEECCCCC-EEE-EecCc-e
Confidence 1235789999988776 467788877899999876 32 23332 2346799999998885 443 44455 8
Q ss_pred EEeeCCCCCcccCCCccCCCCCeeeEEEcCCCCCcceEEeCCCCCcEEEEEeCCCcEEEEecCCCCC
Q 014472 343 MVWDLSRIDEEQTPEDAEDGPPELLFIHGGHTSKISDFSWNPCEDWVISSVAEDNILQIWQMAENIY 409 (424)
Q Consensus 343 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~ 409 (424)
.+|+..+......... ..+ . .-....|.++...+++. +.+++. +-|..|+..++.+
T Consensus 474 ~~~~~~~~~~~~~~~~--~~~-~-----~~~~~~i~~i~~d~~g~-lWigt~--~Gl~~~~~~~~~~ 529 (795)
T 4a2l_A 474 VRFNPEQRSFTTIEKE--KDG-T-----PVVSKQITTLFRDSHKR-LWIGGE--EGLSVFKQEGLDI 529 (795)
T ss_dssp EEEETTTTEEEECCBC--TTC-C-----BCCCCCEEEEEECTTCC-EEEEES--SCEEEEEEETTEE
T ss_pred eEEeCCCCeEEEcccc--ccc-c-----ccCCceEEEEEECCCCC-EEEEeC--CceEEEeCCCCeE
Confidence 8899875421110000 000 0 01235688899999998 555443 4588888876543
No 269
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=98.31 E-value=9.9e-06 Score=80.44 Aligned_cols=207 Identities=8% Similarity=-0.023 Sum_probs=122.3
Q ss_pred CCeeeEEecCCCCceEEEEeCCCcEEEEeCCCCCCCCcccceeeeecCCcceeeEEeeCCCCcEEEEEeCCCeEEEEECC
Q 014472 179 TEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLR 258 (424)
Q Consensus 179 ~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~~s~~~dg~i~i~d~~ 258 (424)
..+.+|+|.+.+..++++-...+.|+.+++........ ....+.........|++.+.+..|+++-...+.|.++++.
T Consensus 406 ~~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~--~~~~i~~~~~~P~glavD~~~g~LY~tD~~~~~I~v~d~d 483 (699)
T 1n7d_A 406 RNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSS--YDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTK 483 (699)
T ss_dssp TTCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-CC--CCCBCCSCC--CCCEECCCSSSBCEECCTTTSCEEEEBSS
T ss_pred cceEEEccccccCeEEEEecCCCeEEEEecCCCCCCcc--eEEEEeCCCCCcceEEEEeeCCcEEEEeccCCeEEEEecC
Confidence 45678999987664444444568899999875210000 0011111123456788887666777666677889999987
Q ss_pred CCCCCCCeeEe-cccCCCeeEEEecCCCCeEEEEEeCC-CcEEEEECCCCCCcceee-cCCCCCEEEEEEcCCCCcEEEE
Q 014472 259 TPSVSKPVQSV-VAHQSEVNCLAFNPFNEWILATGSTD-KTVKLFDLRKISTALHTF-DSHKEEVFQVGWNPKNETILAS 335 (424)
Q Consensus 259 ~~~~~~~~~~~-~~~~~~v~~i~~~~~~~~~l~~g~~d-g~i~iwd~~~~~~~~~~~-~~~~~~v~~~~~sp~~~~~l~s 335 (424)
... ...+ .........|+++|.+.+++++-... +.|..+++.. .....+ ...-.....|+|+|++..++++
T Consensus 484 g~~----~~~l~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG--~~~~~l~~~~l~~PnGlavd~~~~~LY~a 557 (699)
T 1n7d_A 484 GVK----RKTLFREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNG--VDIYSLVTENIQWPNGITLDLLSGRLYWV 557 (699)
T ss_dssp SCC----EEEECCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSS--CCCCEESCSSCSSCCCEEECTTTCCEEEE
T ss_pred CCc----eEEEEeCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCC--CCeeEEEeCCCCCccEEEEeccCCEEEEE
Confidence 543 2222 22234567899999777655554333 6788887764 222222 2223456789999987777777
Q ss_pred EeCCCeEEEeeCCCCCcccCCCccCCCCCeeeEEEcCCCCCcceEEeCCCCCcEEEEEeCCCcEEEEecCCC
Q 014472 336 CCLGRRLMVWDLSRIDEEQTPEDAEDGPPELLFIHGGHTSKISDFSWNPCEDWVISSVAEDNILQIWQMAEN 407 (424)
Q Consensus 336 ~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iw~~~~~ 407 (424)
-+..+.|..+++..... ..+....+......++++..+ .++++....+.|..++..++
T Consensus 558 D~~~~~I~~~d~dG~~~------------~~~~~~~~~~~~P~glavd~~--~lywtd~~~~~V~~~d~~~G 615 (699)
T 1n7d_A 558 DSKLHSISSIDVNGGNR------------KTILEDEKRLAHPFSLAVFED--KVFWTDIINEAIFSANRLTG 615 (699)
T ss_dssp ETTTTEEEEECSSSSCC------------EEECCCSSSCSSCCCCEEETT--EEEEECSTTTCEEEEETTTE
T ss_pred ecCCCeEEEEccCCCce------------EEEEecCCcCCCceEeEEECC--EEEEEeCCCCeEEEEEccCC
Confidence 77788899999864211 111111111223455666443 46777777788888887654
No 270
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=98.28 E-value=0.00017 Score=64.39 Aligned_cols=208 Identities=10% Similarity=0.045 Sum_probs=120.7
Q ss_pred CCeeeEEecCCCCceEEEEeCCCcEEEEeCCCCCCCCccccee--------------eeecCCcceeeEEeeCCCCcEEE
Q 014472 179 TEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQ--------------IFKVHEGVVEDVAWHLRHEYLFG 244 (424)
Q Consensus 179 ~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~--------------~~~~~~~~v~~i~~~~~~~~~~~ 244 (424)
....+++|.+++. +++++..++.|..|+..++.. ..+.... ........+..+++.+++..+++
T Consensus 19 ~~p~~i~~d~~g~-~l~v~~~~~~i~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~l~v 96 (322)
T 2fp8_A 19 YAPNSFTFDSTNK-GFYTSVQDGRVIKYEGPNSGF-VDFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQLYI 96 (322)
T ss_dssp SCCCCEECCTTCS-SEEEECTTSEEEEECCTTTCE-EEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTEEEE
T ss_pred CCceEEEEcCCCC-EEEEEcCCCeEEEECCCCCce-EEEecccccccccccccccchhccccCCCCceEEEcCCCCcEEE
Confidence 3467899998765 688888899999998865421 0000000 00001135788999973345654
Q ss_pred EEeCCCeEEEEECCCCCCCCCeeE-ec-ccCCCeeEEEecC-CCCeEEEEEeC-----------------CCcEEEEECC
Q 014472 245 SVGDDQYLLIWDLRTPSVSKPVQS-VV-AHQSEVNCLAFNP-FNEWILATGST-----------------DKTVKLFDLR 304 (424)
Q Consensus 245 s~~~dg~i~i~d~~~~~~~~~~~~-~~-~~~~~v~~i~~~~-~~~~~l~~g~~-----------------dg~i~iwd~~ 304 (424)
+ ...+.|..+|..++.. ..+.. .. ......+.+++.+ +|. +.++-.. ++.|..||..
T Consensus 97 ~-d~~~~i~~~d~~~g~~-~~~~~~~~~~~~~~p~~i~~d~~~G~-l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~ 173 (322)
T 2fp8_A 97 V-DCYYHLSVVGSEGGHA-TQLATSVDGVPFKWLYAVTVDQRTGI-VYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPS 173 (322)
T ss_dssp E-ETTTEEEEECTTCEEC-EEEESEETTEECSCEEEEEECTTTCC-EEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETT
T ss_pred E-ECCCCEEEEeCCCCEE-EEecccCCCCcccccceEEEecCCCE-EEEECCcccccccccceehcccCCCceEEEEeCC
Confidence 4 4445588888765431 11111 11 1123578899999 886 4544322 3678888876
Q ss_pred CCCCcceeecCCCCCEEEEEEcCCCCcEEEEEeCCCeEEEeeCCCCCcccCCCccCCCCCeeeEEEcCCCCCcceEEeCC
Q 014472 305 KISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPEDAEDGPPELLFIHGGHTSKISDFSWNP 384 (424)
Q Consensus 305 ~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~ 384 (424)
. +.. ..+...-.....++|+|++..++++-...+.|..|++..... +..+.+... .+ ...+++.+
T Consensus 174 ~-~~~-~~~~~~~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~---------~~~~~~~~~---~g-P~gi~~d~ 238 (322)
T 2fp8_A 174 T-KET-TLLLKELHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKK---------GTAEVLVKI---PN-PGNIKRNA 238 (322)
T ss_dssp T-TEE-EEEEEEESCCCEEEECTTSSEEEEEEGGGTEEEEEESSSTTT---------TCEEEEEEC---SS-EEEEEECT
T ss_pred C-CEE-EEeccCCccCcceEECCCCCEEEEEeCCCCeEEEEECCCCcC---------CccceEEeC---CC-CCCeEECC
Confidence 5 222 222111234567999999875566666678899999874210 011222221 22 67899999
Q ss_pred CCCcEEEEEeC----------CCcEEEEecCCC
Q 014472 385 CEDWVISSVAE----------DNILQIWQMAEN 407 (424)
Q Consensus 385 ~~~~~l~s~~~----------d~~i~iw~~~~~ 407 (424)
+|. ++++... .+.|..++....
T Consensus 239 ~G~-l~va~~~~~~~~~~~~~~~~v~~~d~~G~ 270 (322)
T 2fp8_A 239 DGH-FWVSSSEELDGNMHGRVDPKGIKFDEFGN 270 (322)
T ss_dssp TSC-EEEEEEEETTSSTTSCEEEEEEEECTTSC
T ss_pred CCC-EEEEecCcccccccCCCccEEEEECCCCC
Confidence 998 5655543 456777776543
No 271
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=98.28 E-value=0.00047 Score=61.05 Aligned_cols=200 Identities=14% Similarity=0.076 Sum_probs=119.2
Q ss_pred CCeeeEEecCCCCceEEEEeCCCcEEEEeCCCCCCCCcccceeeeecCCcceeeEEeeCCCCcEEEEEeC-CC-eEEEEE
Q 014472 179 TEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGD-DQ-YLLIWD 256 (424)
Q Consensus 179 ~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~~s~~~-dg-~i~i~d 256 (424)
....+++|.+++. ++++-..++.|..||..... ...+ .....+..+++.+++. ++++... ++ .|..+|
T Consensus 32 ~~pegia~~~~g~-lyv~d~~~~~I~~~d~~g~~-------~~~~-~~~~~p~gia~~~dG~-l~vad~~~~~~~v~~~d 101 (306)
T 2p4o_A 32 TFLENLASAPDGT-IFVTNHEVGEIVSITPDGNQ-------QIHA-TVEGKVSGLAFTSNGD-LVATGWNADSIPVVSLV 101 (306)
T ss_dssp CCEEEEEECTTSC-EEEEETTTTEEEEECTTCCE-------EEEE-ECSSEEEEEEECTTSC-EEEEEECTTSCEEEEEE
T ss_pred CCcceEEECCCCC-EEEEeCCCCeEEEECCCCce-------EEEE-eCCCCceeEEEcCCCc-EEEEeccCCcceEEEEc
Confidence 4577899999776 56666678999999876421 1111 1235688999999987 5545433 22 477777
Q ss_pred CCCCCCCCCeeEecccCCCeeEEEecCCCCeEEEEEeCCCcEEEEECCCCCCcce---------eecCCCCCEEEEEEcC
Q 014472 257 LRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATGSTDKTVKLFDLRKISTALH---------TFDSHKEEVFQVGWNP 327 (424)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~---------~~~~~~~~v~~~~~sp 327 (424)
..+++. ..+... ........++..+.+ .++++-..++.|.++|.......+. .....-.....+ +|
T Consensus 102 ~~~g~~-~~~~~~-~~~~~~~g~~~~~~~-~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngi--s~ 176 (306)
T 2p4o_A 102 KSDGTV-ETLLTL-PDAIFLNGITPLSDT-QYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGL--KR 176 (306)
T ss_dssp CTTSCE-EEEEEC-TTCSCEEEEEESSSS-EEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEE--EE
T ss_pred CCCCeE-EEEEeC-CCccccCcccccCCC-cEEEEECCCCeEEEEeCCCCcEeEEEECCccccccccCCCCcCCCc--Cc
Confidence 766542 111111 112233455554533 4555555688999999764211111 000111234555 78
Q ss_pred CCCcEEEEEeCCCeEEEeeCCCCCcccCCCccCCCCCeeeEEEcCCCCCcceEEeCCCCCcEEEEEeCCCcEEEEecCC
Q 014472 328 KNETILASCCLGRRLMVWDLSRIDEEQTPEDAEDGPPELLFIHGGHTSKISDFSWNPCEDWVISSVAEDNILQIWQMAE 406 (424)
Q Consensus 328 ~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iw~~~~ 406 (424)
+++.++++-...+.|..|++...... ...+.+... .....++++++|. ++++....+.|.+++...
T Consensus 177 dg~~lyv~d~~~~~I~~~~~~~~g~~--------~~~~~~~~~----~~P~gi~vd~dG~-l~va~~~~~~V~~~~~~G 242 (306)
T 2p4o_A 177 FGNFLYVSNTEKMLLLRIPVDSTDKP--------GEPEIFVEQ----TNIDDFAFDVEGN-LYGATHIYNSVVRIAPDR 242 (306)
T ss_dssp ETTEEEEEETTTTEEEEEEBCTTSCB--------CCCEEEEES----CCCSSEEEBTTCC-EEEECBTTCCEEEECTTC
T ss_pred CCCEEEEEeCCCCEEEEEEeCCCCCC--------CccEEEecc----CCCCCeEECCCCC-EEEEeCCCCeEEEECCCC
Confidence 88767777777889999998742110 011222221 3467899999998 677766778899998763
No 272
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=98.28 E-value=0.00017 Score=72.49 Aligned_cols=199 Identities=13% Similarity=0.117 Sum_probs=113.3
Q ss_pred CeeeEEec-CCCCceEEEEeCCC----cEEEEeCCCC-CCCCcccceeeeecCCcceeeEEeeCCCCcEEEEEeCC----
Q 014472 180 EGYGLSWS-KFKEGHLLSGSDDA----QICLWDINAA-PKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDD---- 249 (424)
Q Consensus 180 ~v~~l~~~-~~~~~~l~s~~~dg----~i~vwd~~~~-~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~~s~~~d---- 249 (424)
.+...+|+ |+|..+.++.+.+| .|+++|+.++ .... ..+. .....++|+|+++.++.+....
T Consensus 175 ~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~-----~~~~---~~~~~~~WspDg~~l~y~~~d~~~~~ 246 (751)
T 2xe4_A 175 DVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIA-----DKVS---GTNGEIVWGPDHTSLFYVTKDETLRE 246 (751)
T ss_dssp EEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCC-----CCEE---EECSCCEECSSTTEEEEEEECTTCCE
T ss_pred EEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCC-----cccc---CceeeEEEecCCCEEEEEEECCCCCC
Confidence 57789999 99984444444443 4999999876 4211 0111 1245789999998777654432
Q ss_pred CeEEEEECCCCCCCCCeeEec-ccCCCeeEEEecCCCCeEEEEEeC--CCcEEEEECCCCCCcc--eee-cCCCCCEEEE
Q 014472 250 QYLLIWDLRTPSVSKPVQSVV-AHQSEVNCLAFNPFNEWILATGST--DKTVKLFDLRKISTAL--HTF-DSHKEEVFQV 323 (424)
Q Consensus 250 g~i~i~d~~~~~~~~~~~~~~-~~~~~v~~i~~~~~~~~~l~~g~~--dg~i~iwd~~~~~~~~--~~~-~~~~~~v~~~ 323 (424)
..|+++++.++.. .....+. ........+.|+|++++++++... ...|.++|+....... ..+ ........++
T Consensus 247 ~~v~~~~lgt~~~-~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~s~ 325 (751)
T 2xe4_A 247 NKVWRHVMGKLQS-EDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKGNAHNTLEIVRPREKGVRYDV 325 (751)
T ss_dssp EEEEEEETTSCGG-GCEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSCTTCCCEEESSCCCTTCCEEE
T ss_pred CEEEEEECCCCch-hcEEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCCCCCCceeEEeecCCCCceEEE
Confidence 3688888876542 1122222 223446788999999976666543 3468888987632222 333 3334555666
Q ss_pred EEcCCCCcEEEEEeCC--C--eEEEeeCCCCCcccCCCccCCCCCee-eEEEcCCCC--CcceEEeCCCCCcEEEEEeCC
Q 014472 324 GWNPKNETILASCCLG--R--RLMVWDLSRIDEEQTPEDAEDGPPEL-LFIHGGHTS--KISDFSWNPCEDWVISSVAED 396 (424)
Q Consensus 324 ~~sp~~~~~l~s~~~d--g--~i~iwd~~~~~~~~~~~~~~~~~~~~-~~~~~~h~~--~v~~~~~~~~~~~~l~s~~~d 396 (424)
.|+. +..+++....+ + .|..+++..... .+. +. .|.. .+.++.+. +..++++...+
T Consensus 326 ~~~~-g~~l~~~t~~~~a~~~~L~~~d~~~~~~-----------~~~~li---~~~~~~~l~~~~~~--~~~lv~~~~~~ 388 (751)
T 2xe4_A 326 QMHG-TSHLVILTNEGGAVNHKLLIAPRGQPSD-----------WSHVLV---DHSEDVFMESIAVR--SNYLVVAGRRA 388 (751)
T ss_dssp EEET-TTEEEEEECTTTCTTCEEEEEETTSTTC-----------CCCEEE---CCCSSEEEEEEEEC--SSEEEEEEEET
T ss_pred eeee-CCEEEEEeCCCCCCCcEEEEEcCCCccc-----------ceeeEE---CCCCCcEEEEEEEE--CCEEEEEEEeC
Confidence 6654 44556665554 3 466666643210 011 11 1222 34455554 55678888888
Q ss_pred CcEEEEec
Q 014472 397 NILQIWQM 404 (424)
Q Consensus 397 ~~i~iw~~ 404 (424)
+..+||-+
T Consensus 389 g~~~l~~~ 396 (751)
T 2xe4_A 389 GLTRIWTM 396 (751)
T ss_dssp TEEEEEEE
T ss_pred CEEEEEEE
Confidence 86655543
No 273
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=98.27 E-value=0.00038 Score=63.56 Aligned_cols=218 Identities=10% Similarity=-0.032 Sum_probs=119.6
Q ss_pred EEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCCe-----eeEEecCCCCceEEEEeCCCcEEEEeCCCCCCC
Q 014472 140 LIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEG-----YGLSWSKFKEGHLLSGSDDAQICLWDINAAPKN 214 (424)
Q Consensus 140 ~latg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~h~~~v-----~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~ 214 (424)
.+++++.++.|..+|..+ .+............ ...... +. .++.++.++.|..+|..++...
T Consensus 145 ~v~v~~~~g~l~~~d~~t----------G~~~W~~~~~~~~~~~~~~~~~~~~--~~-~v~~g~~~g~l~~~d~~tG~~~ 211 (376)
T 3q7m_A 145 LVLIHTSNGQLQALNEAD----------GAVKWTVNLDMPSLSLRGESAPTTA--FG-AAVVGGDNGRVSAVLMEQGQMI 211 (376)
T ss_dssp EEEEECTTSEEEEEETTT----------CCEEEEEECCC-----CCCCCCEEE--TT-EEEECCTTTEEEEEETTTCCEE
T ss_pred EEEEEcCCCeEEEEECCC----------CcEEEEEeCCCCceeecCCCCcEEE--CC-EEEEEcCCCEEEEEECCCCcEE
Confidence 566677889999999866 22233332211110 111222 23 5888888999999999877432
Q ss_pred CcccceeeeecCC--cc---e-eeEEeeCCCCcEEEEEeCCCeEEEEECCCCCCCCCeeEecccCCCeeEEEecCCCCeE
Q 014472 215 KSLEAMQIFKVHE--GV---V-EDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWI 288 (424)
Q Consensus 215 ~~~~~~~~~~~~~--~~---v-~~i~~~~~~~~~~~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~ 288 (424)
....... ..+.. .. + ...... +..+ ..++.++.+..+|.++++. +.... ......+... +. .
T Consensus 212 w~~~~~~-~~~~~~~~~~~~~~~~p~~~--~~~v-~~~~~~g~l~~~d~~tG~~---~w~~~--~~~~~~~~~~--~~-~ 279 (376)
T 3q7m_A 212 WQQRISQ-ATGSTEIDRLSDVDTTPVVV--NGVV-FALAYNGNLTALDLRSGQI---MWKRE--LGSVNDFIVD--GN-R 279 (376)
T ss_dssp EEEECCC------------CCCCCCEEE--TTEE-EEECTTSCEEEEETTTCCE---EEEEC--CCCEEEEEEE--TT-E
T ss_pred EEEeccc-CCCCcccccccccCCCcEEE--CCEE-EEEecCcEEEEEECCCCcE---Eeecc--CCCCCCceEE--CC-E
Confidence 2111000 00000 00 0 011111 3334 4677899999999988764 22222 2334445443 44 4
Q ss_pred EEEEeCCCcEEEEECCCCCCcceeec-CCCCCEEEEEEcCCCCcEEEEEeCCCeEEEeeCCCCCcccCCCccCCCCCeee
Q 014472 289 LATGSTDKTVKLFDLRKISTALHTFD-SHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPEDAEDGPPELL 367 (424)
Q Consensus 289 l~~g~~dg~i~iwd~~~~~~~~~~~~-~~~~~v~~~~~sp~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~ 367 (424)
++.++.++.|..+|..+ ++.+.... .....+...... +. .|+.++.+|.|.++|..++. .+
T Consensus 280 l~~~~~~g~l~~~d~~t-G~~~w~~~~~~~~~~~~~~~~--~~-~l~v~~~~g~l~~~d~~tG~--------------~~ 341 (376)
T 3q7m_A 280 IYLVDQNDRVMALTIDG-GVTLWTQSDLLHRLLTSPVLY--NG-NLVVGDSEGYLHWINVEDGR--------------FV 341 (376)
T ss_dssp EEEEETTCCEEEEETTT-CCEEEEECTTTTSCCCCCEEE--TT-EEEEECTTSEEEEEETTTCC--------------EE
T ss_pred EEEEcCCCeEEEEECCC-CcEEEeecccCCCcccCCEEE--CC-EEEEEeCCCeEEEEECCCCc--------------EE
Confidence 67778899999999988 55554444 222222223332 32 57788889999999998863 23
Q ss_pred EEEcCCCCCcce-EEeCCCCCcEEEEEeCCCcEEEEe
Q 014472 368 FIHGGHTSKISD-FSWNPCEDWVISSVAEDNILQIWQ 403 (424)
Q Consensus 368 ~~~~~h~~~v~~-~~~~~~~~~~l~s~~~d~~i~iw~ 403 (424)
.........+.. ... .++ .|+.++.+|.|..|+
T Consensus 342 ~~~~~~~~~~~~~~~~-~~~--~l~v~~~~G~l~~~~ 375 (376)
T 3q7m_A 342 AQQKVDSSGFQTEPVA-ADG--KLLIQAKDGTVYSIT 375 (376)
T ss_dssp EEEECCTTCBCSCCEE-ETT--EEEEEBTTSCEEEEE
T ss_pred EEEecCCCcceeCCEE-ECC--EEEEEeCCCEEEEEe
Confidence 333322222222 222 233 366678899999886
No 274
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=98.27 E-value=0.00022 Score=70.48 Aligned_cols=260 Identities=10% Similarity=0.008 Sum_probs=135.9
Q ss_pred CCCcEEEEEEeccCCceeEEEecC-CCCcEEEEEecCC-----------eEEEEeCCCCCCCCCCCCCCCCcEEEec-CC
Q 014472 112 ANGKVQIIQQINHDGEVNRARYMP-QNPFLIATKTVSA-----------EVYVFDYSKHPSKPPLDGACSPDLRLRG-HS 178 (424)
Q Consensus 112 ~~~~~~~~~~~~h~~~v~~i~~~p-~~~~~latg~~dg-----------~v~iwd~~~~~~~~~~~~~~~~~~~~~~-h~ 178 (424)
..++...+..++. .-..+++.| ++ .+++.|+.+. .+.+||..+ ..+.....+.. +.
T Consensus 174 ~~~~W~~~~~~P~--~~~~~av~~~~g-~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t--------~~w~~~~~~~~~~~ 242 (656)
T 1k3i_A 174 GLGRWGPTIDLPI--VPAAAAIEPTSG-RVLMWSSYRNDAFGGSPGGITLTSSWDPST--------GIVSDRTVTVTKHD 242 (656)
T ss_dssp TSCEEEEEEECSS--CCSEEEEETTTT-EEEEEEECCCTTTCSCCCSEEEEEEECTTT--------CCBCCCEEEECSCC
T ss_pred CCCeeeeeccCCC--CceeEEEEecCC-EEEEEecccccccccCCCCeEEEEEEeCCC--------CcEEeCcccCCCCC
Confidence 3444444433332 334667777 55 4777776542 688899887 44555544433 23
Q ss_pred CCeeeEEecCCCCceEEEEe-CCCcEEEEeCCCCCCCCcccceeeeecCCcceeeEEeeCCCCcEEEEEe-CC-----Ce
Q 014472 179 TEGYGLSWSKFKEGHLLSGS-DDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVG-DD-----QY 251 (424)
Q Consensus 179 ~~v~~l~~~~~~~~~l~s~~-~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~~s~~-~d-----g~ 251 (424)
....++++..++. +++.|+ .+..+.+||..+.. +..+..+.... .-.+++..++++ +++.|+ .+ ..
T Consensus 243 ~~~~~~~~~~~g~-lyv~GG~~~~~v~~yd~~t~~----W~~~~~~~~~R-~~~s~~~~~dg~-iyv~GG~~~~~~~~~~ 315 (656)
T 1k3i_A 243 MFCPGISMDGNGQ-IVVTGGNDAKKTSLYDSSSDS----WIPGPDMQVAR-GYQSSATMSDGR-VFTIGGSWSGGVFEKN 315 (656)
T ss_dssp CSSCEEEECTTSC-EEEECSSSTTCEEEEEGGGTE----EEECCCCSSCC-SSCEEEECTTSC-EEEECCCCCSSSCCCC
T ss_pred CccccccCCCCCC-EEEeCCCCCCceEEecCcCCc----eeECCCCCccc-cccceEEecCCe-EEEEeCcccCCccccc
Confidence 3344567777676 777777 45689999987642 11111111111 112344555665 677777 34 56
Q ss_pred EEEEECCCCCCCCCeeEecc-----cCCCeeEEEecCCCCeEEEEEeCCC---------cEEEEECCCCCCcceeecCC-
Q 014472 252 LLIWDLRTPSVSKPVQSVVA-----HQSEVNCLAFNPFNEWILATGSTDK---------TVKLFDLRKISTALHTFDSH- 316 (424)
Q Consensus 252 i~i~d~~~~~~~~~~~~~~~-----~~~~v~~i~~~~~~~~~l~~g~~dg---------~i~iwd~~~~~~~~~~~~~~- 316 (424)
+.+||..+..- ..+.. ....-....+..++. +++.|+.+| .+..||.... .-......+
T Consensus 316 ~e~yd~~t~~W----~~~~~~~~~p~~~~~~~~~~~~~~~-iyv~Gg~~g~~~~~~~~~~v~~yd~~~~-~w~~~~~~~~ 389 (656)
T 1k3i_A 316 GEVYSPSSKTW----TSLPNAKVNPMLTADKQGLYRSDNH-AWLFGWKKGSVFQAGPSTAMNWYYTSGS-GDVKSAGKRQ 389 (656)
T ss_dssp EEEEETTTTEE----EEETTSCSGGGCCCCTTGGGTTTCS-CCEEECGGGCEEECCSSSEEEEEECSTT-CEEEEEEECE
T ss_pred ceEeCCCCCcc----eeCCCccccccccccccceeecCCc-eEEEECCCCcEEEecCccceeeeecCCc-ceeecCCccc
Confidence 89999987541 11100 000000011223333 455555443 5678888763 211111111
Q ss_pred --------CCCEEEEEEcCCCCcEEEEEeCCC-----------eEEEeeCCCCCcccCCCccCCCCCeeeEEE--cCCCC
Q 014472 317 --------KEEVFQVGWNPKNETILASCCLGR-----------RLMVWDLSRIDEEQTPEDAEDGPPELLFIH--GGHTS 375 (424)
Q Consensus 317 --------~~~v~~~~~sp~~~~~l~s~~~dg-----------~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~--~~h~~ 375 (424)
...-.++.|...+..+++.|+.++ .|.+||..+..-. ... ..+..
T Consensus 390 ~~~~~~~~~~~~~av~~~~~~~~i~v~GG~~~~~~~~~~~~~~~v~~yd~~~~~W~--------------~~~~~~mp~~ 455 (656)
T 1k3i_A 390 SNRGVAPDAMCGNAVMYDAVKGKILTFGGSPDYQDSDATTNAHIITLGEPGTSPNT--------------VFASNGLYFA 455 (656)
T ss_dssp ETTEECCCCBTCEEEEEETTTTEEEEECCBSSSSSSBCCCCEEEEECCSTTSCCEE--------------EECTTCCSSC
T ss_pred cccccCCCCCCCceEeccCCCCeEEEEeCCCCCCCCCcCCcceEEEcCCCCCCCee--------------EEccCCCCCC
Confidence 112344555443445788877542 5677777653211 110 11122
Q ss_pred Cc-ceEEeCCCCCcEEEEEeCC-----------CcEEEEecCCCCCC
Q 014472 376 KI-SDFSWNPCEDWVISSVAED-----------NILQIWQMAENIYH 410 (424)
Q Consensus 376 ~v-~~~~~~~~~~~~l~s~~~d-----------~~i~iw~~~~~~~~ 410 (424)
.. .++...|+++ +++.||.+ ..+.+||+.++.+.
T Consensus 456 R~~~~~~~l~~g~-i~v~GG~~~~~~~~~~~~~~~v~~ydp~t~~W~ 501 (656)
T 1k3i_A 456 RTFHTSVVLPDGS-TFITGGQRRGIPFEDSTPVFTPEIYVPEQDTFY 501 (656)
T ss_dssp CBSCEEEECTTSC-EEEECCBSBCCTTCCCSBCCCCEEEEGGGTEEE
T ss_pred cccCCeEECCCCC-EEEECCcccCcCcCCCCcccceEEEcCCCCcee
Confidence 22 3445668888 78888754 46899999887654
No 275
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=98.21 E-value=0.0027 Score=64.10 Aligned_cols=238 Identities=9% Similarity=0.004 Sum_probs=144.1
Q ss_pred CceeEEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEe----------cCCCCeeeEEecCCCCceEE
Q 014472 126 GEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLR----------GHSTEGYGLSWSKFKEGHLL 195 (424)
Q Consensus 126 ~~v~~i~~~p~~~~~latg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~----------~h~~~v~~l~~~~~~~~~l~ 195 (424)
..|.++...+++. |-.|+.++-|..++.... ....+. -....|.++...+++. |.
T Consensus 313 ~~v~~i~~D~~g~--lWigt~~~Gl~~~~~~~~-----------~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~--lW 377 (781)
T 3v9f_A 313 ASARYIFQDSFNN--IWIGTWGGGINFISNAPP-----------TFHTWSYSPTQMNESSLSNKVVSSVCDDGQGK--LW 377 (781)
T ss_dssp SCEEEEEECSSCC--EEEEEBSSCEEEECSSCC-----------SCEEEC----CCCSSCCSSSCEEEEEECTTSC--EE
T ss_pred CeEEEEEEeCCCC--EEEEecCCeEEEeCCCCC-----------cceeeccCccccccCCCCCcceEEEEEcCCCC--EE
Confidence 5688888888775 555666677888887651 111111 0234688888877654 77
Q ss_pred EEeCCCcEEEEeCCCCCCCCcccceeeeecCCcceeeEEeeCCCCcEEEEEeCCCeEEEEECCCCCCCCCeeEec---cc
Q 014472 196 SGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVV---AH 272 (424)
Q Consensus 196 s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~~s~~~dg~i~i~d~~~~~~~~~~~~~~---~~ 272 (424)
.|+.++-|..|+..+.... .+. .........|.++...+++. +. .|+.++-|..+|.+++. +..+. ..
T Consensus 378 igt~~~Gl~~~~~~~~~~~-~~~--~~~~~~~~~v~~i~~d~~g~-lW-igt~~~Gl~~~~~~~~~----~~~~~~~~~~ 448 (781)
T 3v9f_A 378 IGTDGGGINVFENGKRVAI-YNK--ENRELLSNSVLCSLKDSEGN-LW-FGTYLGNISYYNTRLKK----FQIIELEKNE 448 (781)
T ss_dssp EEEBSSCEEEEETTEEEEE-CC-------CCCSBEEEEEECTTSC-EE-EEETTEEEEEECSSSCE----EEECCSTTTC
T ss_pred EEeCCCcEEEEECCCCeEE-Ecc--CCCCCCCcceEEEEECCCCC-EE-EEeccCCEEEEcCCCCc----EEEeccCCCC
Confidence 7776777888987643110 000 00012346788888877765 55 46666778899887644 22221 23
Q ss_pred CCCeeEEEecCCCCeEEEEEeCCCcEEEEECCCCCCcceeecCC-----CCCEEEEEEcCCCCcEEEEEeCCCeEEEeeC
Q 014472 273 QSEVNCLAFNPFNEWILATGSTDKTVKLFDLRKISTALHTFDSH-----KEEVFQVGWNPKNETILASCCLGRRLMVWDL 347 (424)
Q Consensus 273 ~~~v~~i~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~-----~~~v~~~~~sp~~~~~l~s~~~dg~i~iwd~ 347 (424)
...|.++...+++. |..|+. +-|..||..+ +......... ...|.++...+++. +. .|+.++-|..||.
T Consensus 449 ~~~v~~i~~d~~g~--lwigt~-~Gl~~~~~~~-~~~~~~~~~~~~~~~~~~i~~i~~d~~g~-lW-igt~~~Gl~~~~~ 522 (781)
T 3v9f_A 449 LLDVRVFYEDKNKK--IWIGTH-AGVFVIDLAS-KKVIHHYDTSNSQLLENFVRSIAQDSEGR-FW-IGTFGGGVGIYTP 522 (781)
T ss_dssp CCCEEEEEECTTSE--EEEEET-TEEEEEESSS-SSCCEEECTTTSSCSCSCEEEEEECTTCC-EE-EEESSSCEEEECT
T ss_pred CCeEEEEEECCCCC--EEEEEC-CceEEEeCCC-CeEEecccCcccccccceeEEEEEcCCCC-EE-EEEcCCCEEEEeC
Confidence 46799999988775 555665 5688999876 3322221111 46799999999885 44 4454333777887
Q ss_pred CCCCcccCCCccCCCCCeeeEEEc----CCCCCcceEEeCCCCCcEEEEEeCCCcEEEEecCCCCCC
Q 014472 348 SRIDEEQTPEDAEDGPPELLFIHG----GHTSKISDFSWNPCEDWVISSVAEDNILQIWQMAENIYH 410 (424)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~~~~~~----~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~~ 410 (424)
.... +..+. -....|.++...++|. +.+++ .+|.|..|+..++.+.
T Consensus 523 ~~~~---------------~~~~~~~~~l~~~~i~~i~~d~~g~-lWi~T-~~Glv~~~d~~~~~~~ 572 (781)
T 3v9f_A 523 DMQL---------------VRKFNQYEGFCSNTINQIYRSSKGQ-MWLAT-GEGLVCFPSARNFDYQ 572 (781)
T ss_dssp TCCE---------------EEEECTTTTCSCSCEEEEEECTTSC-EEEEE-TTEEEEESCTTTCCCE
T ss_pred CCCe---------------EEEccCCCCCCCCeeEEEEECCCCC-EEEEE-CCCceEEECCCCCcEE
Confidence 6531 11111 1134588888888888 55544 4665588888776543
No 276
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=98.17 E-value=0.004 Score=56.69 Aligned_cols=227 Identities=9% Similarity=0.001 Sum_probs=124.8
Q ss_pred EEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCCeeeEEecCCCCceEEEEeCCCcEEEEeCCCCCCCCcccc
Q 014472 140 LIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEA 219 (424)
Q Consensus 140 ~latg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~ 219 (424)
.+.+++.++.|..+|..+ .+.................. +. .++.++.++.|..+|..+++.......
T Consensus 105 ~v~v~~~~g~l~a~d~~t----------G~~~W~~~~~~~~~~~p~~~--~~-~v~v~~~~g~l~~~d~~tG~~~W~~~~ 171 (376)
T 3q7m_A 105 HVYIGSEKAQVYALNTSD----------GTVAWQTKVAGEALSRPVVS--DG-LVLIHTSNGQLQALNEADGAVKWTVNL 171 (376)
T ss_dssp EEEEEETTSEEEEEETTT----------CCEEEEEECSSCCCSCCEEE--TT-EEEEECTTSEEEEEETTTCCEEEEEEC
T ss_pred EEEEEcCCCEEEEEECCC----------CCEEEEEeCCCceEcCCEEE--CC-EEEEEcCCCeEEEEECCCCcEEEEEeC
Confidence 566678889999999876 23333333222211122222 33 588888999999999988743222111
Q ss_pred eeeeecCCcceeeEEeeCCCCcEEEEEeCCCeEEEEECCCCCCCCCeeEecccCC-C---eeE---EEecC--CCCeEEE
Q 014472 220 MQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQS-E---VNC---LAFNP--FNEWILA 290 (424)
Q Consensus 220 ~~~~~~~~~~v~~i~~~~~~~~~~~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~-~---v~~---i~~~~--~~~~~l~ 290 (424)
....... ......... +.. +..+..++.|..+|.++++. +-....... . +.. +...| .+. .++
T Consensus 172 ~~~~~~~-~~~~~~~~~--~~~-v~~g~~~g~l~~~d~~tG~~---~w~~~~~~~~~~~~~~~~~~~~~~p~~~~~-~v~ 243 (376)
T 3q7m_A 172 DMPSLSL-RGESAPTTA--FGA-AVVGGDNGRVSAVLMEQGQM---IWQQRISQATGSTEIDRLSDVDTTPVVVNG-VVF 243 (376)
T ss_dssp CC------CCCCCCEEE--TTE-EEECCTTTEEEEEETTTCCE---EEEEECCC-----------CCCCCCEEETT-EEE
T ss_pred CCCceee-cCCCCcEEE--CCE-EEEEcCCCEEEEEECCCCcE---EEEEecccCCCCcccccccccCCCcEEECC-EEE
Confidence 0000000 000112222 233 44678899999999988764 222211100 0 000 00111 134 467
Q ss_pred EEeCCCcEEEEECCCCCCcceeecCCCCCEEEEEEcCCCCcEEEEEeCCCeEEEeeCCCCCcccCCCccCCCCCeeeEEE
Q 014472 291 TGSTDKTVKLFDLRKISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPEDAEDGPPELLFIH 370 (424)
Q Consensus 291 ~g~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 370 (424)
.++.++.+..+|.++ ++.+..... .....+... +. .++.++.++.|..+|..++.. +...
T Consensus 244 ~~~~~g~l~~~d~~t-G~~~w~~~~--~~~~~~~~~--~~-~l~~~~~~g~l~~~d~~tG~~--------------~w~~ 303 (376)
T 3q7m_A 244 ALAYNGNLTALDLRS-GQIMWKREL--GSVNDFIVD--GN-RIYLVDQNDRVMALTIDGGVT--------------LWTQ 303 (376)
T ss_dssp EECTTSCEEEEETTT-CCEEEEECC--CCEEEEEEE--TT-EEEEEETTCCEEEEETTTCCE--------------EEEE
T ss_pred EEecCcEEEEEECCC-CcEEeeccC--CCCCCceEE--CC-EEEEEcCCCeEEEEECCCCcE--------------EEee
Confidence 778899999999987 555544442 334444443 33 466777888999999987642 2222
Q ss_pred c-CCCCCcceEEeCCCCCcEEEEEeCCCcEEEEecCCCCCC
Q 014472 371 G-GHTSKISDFSWNPCEDWVISSVAEDNILQIWQMAENIYH 410 (424)
Q Consensus 371 ~-~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~~ 410 (424)
. .....+...... +. .|+.++.+|.|.++|..++.+.
T Consensus 304 ~~~~~~~~~~~~~~--~~-~l~v~~~~g~l~~~d~~tG~~~ 341 (376)
T 3q7m_A 304 SDLLHRLLTSPVLY--NG-NLVVGDSEGYLHWINVEDGRFV 341 (376)
T ss_dssp CTTTTSCCCCCEEE--TT-EEEEECTTSEEEEEETTTCCEE
T ss_pred cccCCCcccCCEEE--CC-EEEEEeCCCeEEEEECCCCcEE
Confidence 2 111122233332 34 4667788999999999888653
No 277
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=98.14 E-value=0.0066 Score=59.31 Aligned_cols=224 Identities=7% Similarity=0.006 Sum_probs=141.9
Q ss_pred cCCeEEEEeCCCCCCCCCCCCCCCCcEEEe-cCCCCeeeEEecCCCCceEEEEeCCCcEEEEeCCCCCCCCcccceeeee
Q 014472 146 VSAEVYVFDYSKHPSKPPLDGACSPDLRLR-GHSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFK 224 (424)
Q Consensus 146 ~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~-~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~ 224 (424)
....|+..++... .....+. ..-..+.+|+|.+.+..++.+-..++.|..+++..... .....
T Consensus 13 ~~~~I~~i~l~~~----------~~~~~~~~~~~~~~~~l~~d~~~~~lywtD~~~~~I~r~~~~g~~~------~~v~~ 76 (628)
T 4a0p_A 13 RRADIRRISLETN----------NNNVAIPLTGVKEASALDFDVTDNRIYWTDISLKTISRAFMNGSAL------EHVVE 76 (628)
T ss_dssp ETTEEEEEESSCT----------TCEEECCCCSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC------EEEEC
T ss_pred eCCcEEEEECCCC----------CcceEEEcCCCCceEEEEEECCCCEEEEEECCCCeEEEEECCCCCc------EEEEe
Confidence 4578999998761 1111111 12346789999997775555656688999999865421 11112
Q ss_pred cCCcceeeEEeeCCCCcEEEEEeCCCeEEEEECCCCCCCCCeeEecccCCCeeEEEecCCCCeEEEEE-eCCCcEEEEEC
Q 014472 225 VHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATG-STDKTVKLFDL 303 (424)
Q Consensus 225 ~~~~~v~~i~~~~~~~~~~~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~l~~g-~~dg~i~iwd~ 303 (424)
........+++.+.+.+++.+-...+.|.+.++..... .......-.....|+++|....++++- +..+.|...++
T Consensus 77 ~g~~~P~GlAvD~~~~~LY~tD~~~~~I~v~~~dG~~~---~~l~~~~l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~ 153 (628)
T 4a0p_A 77 FGLDYPEGMAVDWLGKNLYWADTGTNRIEVSKLDGQHR---QVLVWKDLDSPRALALDPAEGFMYWTEWGGKPKIDRAAM 153 (628)
T ss_dssp SSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSTTC---EEEECSSCCCEEEEEEETTTTEEEEEECSSSCEEEEEET
T ss_pred CCCCCcceEEEEeCCCEEEEEECCCCEEEEEecCCCcE---EEEEeCCCCCcccEEEccCCCeEEEeCCCCCCEEEEEeC
Confidence 12245778999888888888877889999999975431 112223345678999999776655554 22567888887
Q ss_pred CCCCCcceeecCCCCCEEEEEEcCCCCcEEEEEeCCCeEEEeeCCCCCcccCCCccCCCCCeeeEEEcCCCCCcceEEeC
Q 014472 304 RKISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPEDAEDGPPELLFIHGGHTSKISDFSWN 383 (424)
Q Consensus 304 ~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~ 383 (424)
.. .....+...-.....|++++.++.++.+-...+.|..+++..... +.+.. ......++++.
T Consensus 154 dG--~~~~~l~~~~~~P~GlalD~~~~~LY~aD~~~~~I~~~d~dG~~~------------~v~~~---~l~~P~glav~ 216 (628)
T 4a0p_A 154 DG--SERTTLVPNVGRANGLTIDYAKRRLYWTDLDTNLIESSNMLGLNR------------EVIAD---DLPHPFGLTQY 216 (628)
T ss_dssp TS--CSCEEEECSCSSEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC------------EEEEE---CCSCEEEEEEE
T ss_pred CC--CceEEEECCCCCcceEEEccccCEEEEEECCCCEEEEEcCCCCce------------EEeec---cCCCceEEEEE
Confidence 64 223333334567889999998776676767778899999865321 22221 12234567775
Q ss_pred CCCCcEEEEEeCCCcEEEEecCCC
Q 014472 384 PCEDWVISSVAEDNILQIWQMAEN 407 (424)
Q Consensus 384 ~~~~~~l~s~~~d~~i~iw~~~~~ 407 (424)
. + .++++-...+.|...+..++
T Consensus 217 ~-~-~ly~tD~~~~~I~~~dk~tg 238 (628)
T 4a0p_A 217 Q-D-YIYWTDWSRRSIERANKTSG 238 (628)
T ss_dssp T-T-EEEEEETTTTEEEEEETTTC
T ss_pred C-C-EEEEecCCCCEEEEEECCCC
Confidence 4 3 36666666778888876554
No 278
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=98.11 E-value=0.0025 Score=64.35 Aligned_cols=249 Identities=9% Similarity=0.018 Sum_probs=144.3
Q ss_pred CCceeEEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEE------------EecCCCCeeeEEecCCCCc
Q 014472 125 DGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLR------------LRGHSTEGYGLSWSKFKEG 192 (424)
Q Consensus 125 ~~~v~~i~~~p~~~~~latg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~------------~~~h~~~v~~l~~~~~~~~ 192 (424)
...|.++...+++. |..|+..+-|.+++..... ...... ..-....|.++...+++.
T Consensus 257 ~~~i~~i~~d~~g~--lWigt~~~Gl~~~~~~~~~--------~~~~~~~~f~~~~~~~~~~~l~~~~v~~i~~D~~g~- 325 (781)
T 3v9f_A 257 SSYIFSIKQLKDNK--LWIATELNGIMILDLQQNQ--------FLLPEQIRFEFIREGDNNYSLSNASARYIFQDSFNN- 325 (781)
T ss_dssp CCCEEEEEECTTSE--EEEEESSSCEEEEETTCC-----------------CEEECBCSSTTSBSSSCEEEEEECSSCC-
T ss_pred CceEEEEEECCCCC--EEEEeCCCCeEEECCCCCe--------eeeeeccccccccCCCCCCCCCCCeEEEEEEeCCCC-
Confidence 35688888887774 5556664568888876521 111100 001235688888877665
Q ss_pred eEEEEeCCCcEEEEeCCCCCCCCccccee----eeecCCcceeeEEeeCCCCcEEEEEeCCCeEEEEECCCCCCCCCeeE
Q 014472 193 HLLSGSDDAQICLWDINAAPKNKSLEAMQ----IFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQS 268 (424)
Q Consensus 193 ~l~s~~~dg~i~vwd~~~~~~~~~~~~~~----~~~~~~~~v~~i~~~~~~~~~~~s~~~dg~i~i~d~~~~~~~~~~~~ 268 (424)
|-.|+.++-|..++....... .+.... ........|.++...+++. +. .|+.++-|..||..+.........
T Consensus 326 -lWigt~~~Gl~~~~~~~~~~~-~~~~~~~~~~~~~l~~~~v~~i~~d~~g~-lW-igt~~~Gl~~~~~~~~~~~~~~~~ 401 (781)
T 3v9f_A 326 -IWIGTWGGGINFISNAPPTFH-TWSYSPTQMNESSLSNKVVSSVCDDGQGK-LW-IGTDGGGINVFENGKRVAIYNKEN 401 (781)
T ss_dssp -EEEEEBSSCEEEECSSCCSCE-EEC----CCCSSCCSSSCEEEEEECTTSC-EE-EEEBSSCEEEEETTEEEEECC---
T ss_pred -EEEEecCCeEEEeCCCCCcce-eeccCccccccCCCCCcceEEEEEcCCCC-EE-EEeCCCcEEEEECCCCeEEEccCC
Confidence 777787788889987654211 110000 0011235688998887775 54 566566688899865431100000
Q ss_pred ecccCCCeeEEEecCCCCeEEEEEeCCCcEEEEECCCCCCcceeec---CCCCCEEEEEEcCCCCcEEEEEeCCCeEEEe
Q 014472 269 VVAHQSEVNCLAFNPFNEWILATGSTDKTVKLFDLRKISTALHTFD---SHKEEVFQVGWNPKNETILASCCLGRRLMVW 345 (424)
Q Consensus 269 ~~~~~~~v~~i~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~---~~~~~v~~~~~sp~~~~~l~s~~~dg~i~iw 345 (424)
.......|.++...+++. |..|+.++-|..+|.++ +. ...+. .....|.++...+++. +. .|+.. -|..|
T Consensus 402 ~~~~~~~v~~i~~d~~g~--lWigt~~~Gl~~~~~~~-~~-~~~~~~~~~~~~~v~~i~~d~~g~-lw-igt~~-Gl~~~ 474 (781)
T 3v9f_A 402 RELLSNSVLCSLKDSEGN--LWFGTYLGNISYYNTRL-KK-FQIIELEKNELLDVRVFYEDKNKK-IW-IGTHA-GVFVI 474 (781)
T ss_dssp --CCCSBEEEEEECTTSC--EEEEETTEEEEEECSSS-CE-EEECCSTTTCCCCEEEEEECTTSE-EE-EEETT-EEEEE
T ss_pred CCCCCcceEEEEECCCCC--EEEEeccCCEEEEcCCC-Cc-EEEeccCCCCCCeEEEEEECCCCC-EE-EEECC-ceEEE
Confidence 012346789999888776 55677777788998865 22 22332 2356799999988884 34 44554 48889
Q ss_pred eCCCCCcccCCCccCCCCCeeeEEEc---CCCCCcceEEeCCCCCcEEEEEeCCCcEEEEecCCCCC
Q 014472 346 DLSRIDEEQTPEDAEDGPPELLFIHG---GHTSKISDFSWNPCEDWVISSVAEDNILQIWQMAENIY 409 (424)
Q Consensus 346 d~~~~~~~~~~~~~~~~~~~~~~~~~---~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~ 409 (424)
+..+..... ..... .....|.++...++|. +.++ +.++-|..|+..++.+
T Consensus 475 ~~~~~~~~~------------~~~~~~~~~~~~~i~~i~~d~~g~-lWig-t~~~Gl~~~~~~~~~~ 527 (781)
T 3v9f_A 475 DLASKKVIH------------HYDTSNSQLLENFVRSIAQDSEGR-FWIG-TFGGGVGIYTPDMQLV 527 (781)
T ss_dssp ESSSSSCCE------------EECTTTSSCSCSCEEEEEECTTCC-EEEE-ESSSCEEEECTTCCEE
T ss_pred eCCCCeEEe------------cccCcccccccceeEEEEEcCCCC-EEEE-EcCCCEEEEeCCCCeE
Confidence 877543211 00000 1134688899999888 4544 3433477788776543
No 279
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=98.10 E-value=3e-05 Score=76.95 Aligned_cols=210 Identities=7% Similarity=0.018 Sum_probs=123.0
Q ss_pred CCceeEEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCCeeeEEecCCCCceEEEEeCCCcEE
Q 014472 125 DGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDDAQIC 204 (424)
Q Consensus 125 ~~~v~~i~~~p~~~~~latg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~ 204 (424)
...+..|+|.+.+..++.+-...+.|+.+++...... ......+........+|++.+.+..++++-...+.|.
T Consensus 405 ~~~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~------~~~~~~i~~~~~~P~glavD~~~g~LY~tD~~~~~I~ 478 (699)
T 1n7d_A 405 LRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGV------SSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVS 478 (699)
T ss_dssp CTTCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-------CCCCCBCCSCC--CCCEECCCSSSBCEECCTTTSCEE
T ss_pred CcceEEEccccccCeEEEEecCCCeEEEEecCCCCCC------cceEEEEeCCCCCcceEEEEeeCCcEEEEeccCCeEE
Confidence 3456788999877666666566788999988641100 0001111111123456777765554555555678899
Q ss_pred EEeCCCCCCCCcccceeeeecCCcceeeEEeeCCCCcEEEEEeCC-CeEEEEECCCCCCCCCeeEecccCCCeeEEEecC
Q 014472 205 LWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDD-QYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNP 283 (424)
Q Consensus 205 vwd~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~~s~~~d-g~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~~ 283 (424)
++++..... ...+.........|+++|.+..++.+-... +.|.++++..... .......-...+.|+|+|
T Consensus 479 v~d~dg~~~------~~l~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~~---~~l~~~~l~~PnGlavd~ 549 (699)
T 1n7d_A 479 VADTKGVKR------KTLFREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDI---YSLVTENIQWPNGITLDL 549 (699)
T ss_dssp EEBSSSCCE------EEECCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCCC---CEESCSSCSSCCCEEECT
T ss_pred EEecCCCce------EEEEeCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCCe---eEEEeCCCCCccEEEEec
Confidence 999865321 111122234567899999777777554333 7788887764321 111112234567899999
Q ss_pred CCCeEEEEEeCCCcEEEEECCCCCCcceeec--CCCCCEEEEEEcCCCCcEEEEEeCCCeEEEeeCCCCCc
Q 014472 284 FNEWILATGSTDKTVKLFDLRKISTALHTFD--SHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDE 352 (424)
Q Consensus 284 ~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~--~~~~~v~~~~~sp~~~~~l~s~~~dg~i~iwd~~~~~~ 352 (424)
++.+++++-...+.|..+|+.. ......+. ..-.....|++..+ .++++....+.|..++..++..
T Consensus 550 ~~~~LY~aD~~~~~I~~~d~dG-~~~~~~~~~~~~~~~P~glavd~~--~lywtd~~~~~V~~~d~~~G~~ 617 (699)
T 1n7d_A 550 LSGRLYWVDSKLHSISSIDVNG-GNRKTILEDEKRLAHPFSLAVFED--KVFWTDIINEAIFSANRLTGSD 617 (699)
T ss_dssp TTCCEEEEETTTTEEEEECSSS-SCCEEECCCSSSCSSCCCCEEETT--EEEEECSTTTCEEEEETTTEEE
T ss_pred cCCEEEEEecCCCeEEEEccCC-CceEEEEecCCcCCCceEeEEECC--EEEEEeCCCCeEEEEEccCCCc
Confidence 8877777777778999999874 22222221 11123345555443 4677777778899998766543
No 280
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=98.08 E-value=0.0087 Score=58.48 Aligned_cols=203 Identities=6% Similarity=-0.002 Sum_probs=133.4
Q ss_pred CceeEEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCCeeeEEecCCCCceEEEEeCCCcEEE
Q 014472 126 GEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDDAQICL 205 (424)
Q Consensus 126 ~~v~~i~~~p~~~~~latg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~v 205 (424)
..+..|+|.+.+..++.+-..++.|+.+++.. ......+........+|++.+.+.++.++-...+.|.+
T Consensus 37 ~~~~~l~~d~~~~~lywtD~~~~~I~r~~~~g----------~~~~~v~~~g~~~P~GlAvD~~~~~LY~tD~~~~~I~v 106 (628)
T 4a0p_A 37 KEASALDFDVTDNRIYWTDISLKTISRAFMNG----------SALEHVVEFGLDYPEGMAVDWLGKNLYWADTGTNRIEV 106 (628)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETTS----------CSCEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEE
T ss_pred CceEEEEEECCCCEEEEEECCCCeEEEEECCC----------CCcEEEEeCCCCCcceEEEEeCCCEEEEEECCCCEEEE
Confidence 45778999998777888877889999998875 11122222222346678877666655566666788999
Q ss_pred EeCCCCCCCCcccceeeeecCCcceeeEEeeCCCCcEEEEE-eCCCeEEEEECCCCCCCCCeeEecccCCCeeEEEecCC
Q 014472 206 WDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSV-GDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPF 284 (424)
Q Consensus 206 wd~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~~s~-~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~~~ 284 (424)
.++..... . ......-.....|++.|....++.+- +..+.|...++..... ..+...-...+.|++++.
T Consensus 107 ~~~dG~~~----~--~l~~~~l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~dG~~~----~~l~~~~~~P~GlalD~~ 176 (628)
T 4a0p_A 107 SKLDGQHR----Q--VLVWKDLDSPRALALDPAEGFMYWTEWGGKPKIDRAAMDGSER----TTLVPNVGRANGLTIDYA 176 (628)
T ss_dssp EETTSTTC----E--EEECSSCCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSC----EEEECSCSSEEEEEEETT
T ss_pred EecCCCcE----E--EEEeCCCCCcccEEEccCCCeEEEeCCCCCCEEEEEeCCCCce----EEEECCCCCcceEEEccc
Confidence 99865421 1 11112334678999999777777664 2367888888865442 222233456889999998
Q ss_pred CCeEEEEEeCCCcEEEEECCCCCCcceeecCCCCCEEEEEEcCCCCcEEEEEeCCCeEEEeeCCCCCc
Q 014472 285 NEWILATGSTDKTVKLFDLRKISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDE 352 (424)
Q Consensus 285 ~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~s~~~dg~i~iwd~~~~~~ 352 (424)
+..+.++=...+.|..+|+..... ..+.........+++.. + .++.+-...+.|...|..++..
T Consensus 177 ~~~LY~aD~~~~~I~~~d~dG~~~--~v~~~~l~~P~glav~~-~-~ly~tD~~~~~I~~~dk~tg~~ 240 (628)
T 4a0p_A 177 KRRLYWTDLDTNLIESSNMLGLNR--EVIADDLPHPFGLTQYQ-D-YIYWTDWSRRSIERANKTSGQN 240 (628)
T ss_dssp TTEEEEEETTTTEEEEEETTSCSC--EEEEECCSCEEEEEEET-T-EEEEEETTTTEEEEEETTTCCS
T ss_pred cCEEEEEECCCCEEEEEcCCCCce--EEeeccCCCceEEEEEC-C-EEEEecCCCCEEEEEECCCCCc
Confidence 887777766778999999975322 33333344566788765 3 4666666678888888766543
No 281
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=98.05 E-value=0.00043 Score=68.46 Aligned_cols=238 Identities=9% Similarity=0.103 Sum_probs=128.8
Q ss_pred EEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCC-CCeeeEEecC--CCCceEEEEeC------CCcEEEEeCCC
Q 014472 140 LIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHS-TEGYGLSWSK--FKEGHLLSGSD------DAQICLWDINA 210 (424)
Q Consensus 140 ~latg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~h~-~~v~~l~~~~--~~~~~l~s~~~------dg~i~vwd~~~ 210 (424)
.+++++.++.|..+|..+ .+......... .....+.-.| .+. .++++.. +|.|..+|..+
T Consensus 119 ~v~v~~~dg~l~alD~~t----------G~~~W~~~~~~~~~~~~~~~~P~v~~~-~v~vg~~~~~~~~~g~v~a~D~~t 187 (668)
T 1kv9_A 119 KVYVGTLDGRLIALDAKT----------GKAIWSQQTTDPAKPYSITGAPRVVKG-KVIIGNGGAEYGVRGFVSAYDADT 187 (668)
T ss_dssp EEEEECTTSEEEEEETTT----------CCEEEEEECSCTTSSCBCCSCCEEETT-EEEECCBCTTTCCBCEEEEEETTT
T ss_pred EEEEEcCCCEEEEEECCC----------CCEeeeeccCCCCCcceecCCCEEECC-EEEEeCCCCCcCCCCEEEEEECCC
Confidence 566778899999999877 33333333211 0001111111 123 4555543 58899999988
Q ss_pred CCCCCcccceee-----------------ee--------cCCcceeeEEeeCCCCcEEEEEeCCC---------------
Q 014472 211 APKNKSLEAMQI-----------------FK--------VHEGVVEDVAWHLRHEYLFGSVGDDQ--------------- 250 (424)
Q Consensus 211 ~~~~~~~~~~~~-----------------~~--------~~~~~v~~i~~~~~~~~~~~s~~~dg--------------- 250 (424)
++....+..... +. ++......+++.|....+ ..+..++
T Consensus 188 G~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~~w~~~~gg~~w~~~a~d~~~~~v-y~~~~~g~~w~~~~~~~~~gd~ 266 (668)
T 1kv9_A 188 GKLAWRFYTVPGDPALPYEHPELREAAKTWQGDQYWKLGGGGTVWDSMAYDPELDLL-YVGTGNGSPWNREVRSPGGGDN 266 (668)
T ss_dssp CCEEEEEESSCCCTTSCCSSHHHHHHHTTCCSSCHHHHCEECCCCSCEEEETTTTEE-EEECCCEESSCHHHHSTTCCCC
T ss_pred CcEEEEecccCCCCCccccccccccccccCCccceeeeCCCCccccceEEcCCCCEE-EEeCCCCCccccCCCCCCCCCc
Confidence 864332211000 00 011122346788876644 4666555
Q ss_pred ----eEEEEECCCCCCCCCeeEecc--cC-------CCeeEEEecCCCC--eEEEEEeCCCcEEEEECCCCCCcceeecC
Q 014472 251 ----YLLIWDLRTPSVSKPVQSVVA--HQ-------SEVNCLAFNPFNE--WILATGSTDKTVKLFDLRKISTALHTFDS 315 (424)
Q Consensus 251 ----~i~i~d~~~~~~~~~~~~~~~--~~-------~~v~~i~~~~~~~--~~l~~g~~dg~i~iwd~~~~~~~~~~~~~ 315 (424)
.|..+|.++++. +-.+.. |. .+.....+..++. .+++.++.+|.++++|.++ ++.+.....
T Consensus 267 l~~~~v~AlD~~tG~~---~W~~~~~~~~~wd~~~~~~~~~~d~~~~G~~~~~v~~~~~~G~l~~lD~~t-G~~l~~~~~ 342 (668)
T 1kv9_A 267 LYLSSILAIRPDTGKL---AWHYQVTPGDSWDFTATQQITLAELNIDGKPRKVLMQAPKNGFFYVLDRTN-GKLISAEKF 342 (668)
T ss_dssp TTTTEEEEECTTTCCE---EEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTT-CCEEEEEES
T ss_pred eeeeeEEEEcCCCCce---eeEeecCCCccccccCCCCcEEEEeccCCcEEEEEEEECCCCEEEEEECCC-CCEeccccc
Confidence 499999998874 222221 22 2222222222343 3588899999999999988 555422211
Q ss_pred CC------------CCE------------------------EEEEEcCCCCcEEEEE-----------------------
Q 014472 316 HK------------EEV------------------------FQVGWNPKNETILASC----------------------- 336 (424)
Q Consensus 316 ~~------------~~v------------------------~~~~~sp~~~~~l~s~----------------------- 336 (424)
.. .++ ..++++|+...+++..
T Consensus 343 ~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~~p~~~G~~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~~~~~~~g 422 (668)
T 1kv9_A 343 GKVTWAEKVDLATGRPVEAPGVRYEKEPIVMWPSPFGAHNWHSMSFNPGTGLVYIPYQEVPGVYRNEGKDFVTRKAFNTA 422 (668)
T ss_dssp SCCCSEEEECTTTCCEEECTTTTCSSSCEEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEECCCGGGCCCCSSCCCS
T ss_pred cccccccccccccCCccccccccccCCeeEECCCCccccCCCcceECCCCCEEEEeccccceEeeeeccccccccccccC
Confidence 10 000 1256777765333211
Q ss_pred ------------eCCCeEEEeeCCCCCcccCCCccCCCCCeeeEEEcCCCCCcceEEeCCCCCcEEEEEeCCCcEEEEec
Q 014472 337 ------------CLGRRLMVWDLSRIDEEQTPEDAEDGPPELLFIHGGHTSKISDFSWNPCEDWVISSVAEDNILQIWQM 404 (424)
Q Consensus 337 ------------~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iw~~ 404 (424)
..+|.|..||+.+++ .+..+..+ ..+....+...+. +++.++.|+.|+.||.
T Consensus 423 ~~~~~~~~~p~~~~~g~l~A~D~~tG~--------------~~W~~~~~-~~~~~~~~~t~gg-~vf~g~~dg~l~a~d~ 486 (668)
T 1kv9_A 423 AGFADATDVPAAVVSGALLAWDPVKQK--------------AAWKVPYP-THWNGGTLSTAGN-LVFQGTAAGQMHAYSA 486 (668)
T ss_dssp SCGGGCCCCCGGGCEEEEEEEETTTTE--------------EEEEEEES-SSCCCCEEEETTT-EEEEECTTSEEEEEET
T ss_pred ccccccCCCCCCCccceEEEEeCCCCc--------------EEEEccCC-CCCcCceeEeCCC-EEEEECCcccchhhhh
Confidence 123678888887753 33333222 2233334445566 6777899999999999
Q ss_pred CCCCC
Q 014472 405 AENIY 409 (424)
Q Consensus 405 ~~~~~ 409 (424)
.++..
T Consensus 487 ~tG~~ 491 (668)
T 1kv9_A 487 DKGEA 491 (668)
T ss_dssp TTCCE
T ss_pred hcChh
Confidence 98754
No 282
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=97.96 E-value=0.0087 Score=58.39 Aligned_cols=229 Identities=7% Similarity=-0.032 Sum_probs=135.3
Q ss_pred cCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCCeeeEEecCCCCceEEEEeCCCcEEEEeCCCCCCCCcccceeeeec
Q 014472 146 VSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKV 225 (424)
Q Consensus 146 ~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~ 225 (424)
....|+..++.... .. ...+...-..+.+|+|++.+..++.+=...+.|..++++.... ....+..
T Consensus 16 ~~~~I~~i~~~~~~--------~~-~~~~~~~~~~~~~ld~~~~~~~ly~sD~~~~~I~r~~~~g~~~-----~~~v~~~ 81 (619)
T 3s94_A 16 NRRDLRLVDATNGK--------EN-ATIVVGGLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTES-----VQNVVVS 81 (619)
T ss_dssp CSSBEEEECCC------------------CBCCSCEEEEEEETTTTEEEEEETTTTEEEEEEC----------CEEEECS
T ss_pred ccccEEEEeCCCCc--------ce-EEEEEcCCCceEEEEEEeCCCEEEEEECCCCeEEEEEccCCCc-----eEEEEeC
Confidence 35678888887510 01 1112223445789999987764444544567898898865421 0111222
Q ss_pred CCcceeeEEeeCCCCcEEEEEeCCCeEEEEECCCCCCCCCeeEecccCCCeeEEEecCCCCeEEEEEe-CCCcEEEEECC
Q 014472 226 HEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATGS-TDKTVKLFDLR 304 (424)
Q Consensus 226 ~~~~v~~i~~~~~~~~~~~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~l~~g~-~dg~i~iwd~~ 304 (424)
.-.....+++.+.+..++.+-...+.|.+.++..... .......-.....|+++|.+.+++++-- ..+.|...++.
T Consensus 82 ~~~~P~GlAvD~~~~~ly~~d~~~~~I~v~~~dG~~~---~~l~~~~l~~P~~Iavdp~~g~ly~tD~g~~~~I~r~~~d 158 (619)
T 3s94_A 82 GLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLR---KVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMD 158 (619)
T ss_dssp SCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC---EEEECSSCSCCCCEEEETTTTEEEEEECSSSCEEEEEETT
T ss_pred CCCCcCeEEEEecCCEEEEEeCCCCEEEEEECCCCCE---EEEEeCCCCCCceEEEecCCCeEEEeccCCCCEEEEEECC
Confidence 2256889999998888887878889999999976432 1122233456789999998776666542 24577777766
Q ss_pred CCCCcceeecCCCCCEEEEEEcCCCCcEEEEEeCCCeEEEeeCCCCCcccCCCccCCCCCeeeEEEcCCCCCcceEEeCC
Q 014472 305 KISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPEDAEDGPPELLFIHGGHTSKISDFSWNP 384 (424)
Q Consensus 305 ~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~ 384 (424)
. ..........-.....+++++.++.++++-...+.|..+++...... . + ..+......++++..
T Consensus 159 G-~~~~~l~~~~~~~P~Glald~~~~~LY~aD~~~~~I~~~~~dG~~~~-----------~-~--~~~~~~~P~gi~~~~ 223 (619)
T 3s94_A 159 G-SSRFIIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQ-----------A-V--VKGSLPHPFALTLFE 223 (619)
T ss_dssp S-CSCEEEECSSCSSEEEEEEETTTTEEEEEETTTCCEEEESSSCCEEC-----------------------CCCEEESS
T ss_pred C-CceEEEEeCCCCCCcEEEEEccCCEEEEEeCCCCeEEEecCCCCccE-----------E-E--EeCCCCCceEEEEeC
Confidence 4 22222222234567899999987666666666778888888643211 1 1 111112245677765
Q ss_pred CCCcEEEEEeCCCcEEEEecCCCC
Q 014472 385 CEDWVISSVAEDNILQIWQMAENI 408 (424)
Q Consensus 385 ~~~~~l~s~~~d~~i~iw~~~~~~ 408 (424)
+ .++.+-...+.|...+..++.
T Consensus 224 ~--~ly~td~~~~~V~~~d~~tg~ 245 (619)
T 3s94_A 224 D--ILYWTDWSTHSILACNKYTGE 245 (619)
T ss_dssp S--EEEEECTTTCSEEEEESSSCC
T ss_pred C--EEEEecCCCCEEEEEECCCCc
Confidence 5 366666667788888876653
No 283
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=97.93 E-value=0.00078 Score=62.76 Aligned_cols=159 Identities=9% Similarity=0.103 Sum_probs=100.4
Q ss_pred ceeeEEeeC-CCCcEEEEEeCCCeEEEEECCCCCCCCCeeEecccCCCeeEEEecCCCCeEEEEEeCCC----cEEEEEC
Q 014472 229 VVEDVAWHL-RHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATGSTDK----TVKLFDL 303 (424)
Q Consensus 229 ~v~~i~~~~-~~~~~~~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~l~~g~~dg----~i~iwd~ 303 (424)
....++++| ++..++++-.. +.|+.+|+.... +..+.........|+|++++..++++...++ .+.+++.
T Consensus 138 ~P~~lavdp~~~g~Lyv~d~~-~~I~~id~~~~~----v~~~~~~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~ 212 (430)
T 3tc9_A 138 GAVWLSFDPKNHNHLYLVGEQ-HPTRLIDFEKEY----VSTVYSGLSKVRTICWTHEADSMIITNDQNNNDRPNNYILTR 212 (430)
T ss_dssp CCCEEEEETTEEEEEEEEEBT-EEEEEEETTTTE----EEEEECCCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEG
T ss_pred CCCEEEECCCCCCeEEEEeCC-CcEEEEECCCCE----EEEEecCCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeC
Confidence 457889998 45567655443 889999997644 3333334566889999999986565554333 3444443
Q ss_pred CCCCCcceeecCCCCCEEEEEEcCCCCcEEEEEeCCCeEEEeeCCCCCcccCCCccCCCCCeeeEEEcCCCCCcceEEeC
Q 014472 304 RKISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPEDAEDGPPELLFIHGGHTSKISDFSWN 383 (424)
Q Consensus 304 ~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~ 383 (424)
.........+.. ......++++|++..++++-..++.|..++...... ..+..... ......++|+
T Consensus 213 ~g~~~~~~~l~~-~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~------------~~~~~~~~-~~~P~gia~~ 278 (430)
T 3tc9_A 213 ESGFKVITELTK-GQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQET------------TPLFTIQD-SGWEFHIQFH 278 (430)
T ss_dssp GGTSCSEEEEEE-CSSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEE------------EEEEECSS-SSCCEEEEEC
T ss_pred CCceeeeeeecc-CCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcE------------EEEEEcCC-CCcceeEEEc
Confidence 321111122221 334577889994445777776788999999875311 11222222 2346789999
Q ss_pred CCCCcEEEEEeCCCcEEEEecCC
Q 014472 384 PCEDWVISSVAEDNILQIWQMAE 406 (424)
Q Consensus 384 ~~~~~~l~s~~~d~~i~iw~~~~ 406 (424)
|++++++++-...+.|..++...
T Consensus 279 pdG~~lyv~d~~~~~I~~~~~d~ 301 (430)
T 3tc9_A 279 PSGNYAYIVVVNQHYILRSDYDW 301 (430)
T ss_dssp TTSSEEEEEETTTTEEEEEEEET
T ss_pred CCCCEEEEEECCCCEEEEEeCCc
Confidence 99997777777888999988763
No 284
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=97.91 E-value=0.0027 Score=59.08 Aligned_cols=206 Identities=12% Similarity=0.082 Sum_probs=118.0
Q ss_pred CeeeEEecCC-CCceEEEEeCCCcEEEEeCCCCCCCCcccceeeeecCCcceeeEEeeCCCCcEEEEEeCC---Ce-EEE
Q 014472 180 EGYGLSWSKF-KEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDD---QY-LLI 254 (424)
Q Consensus 180 ~v~~l~~~~~-~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~~s~~~d---g~-i~i 254 (424)
...+|+|.|+ ..+.|+.+...+.|+.+|+.++. +..+.........+++++++. ++++.... .. +..
T Consensus 140 ~P~gvavd~~s~~g~Lyv~D~~~~I~~id~~~g~-------v~~~~~~~~~P~giavd~dG~-lyVad~~~~~~~~gv~~ 211 (433)
T 4hw6_A 140 NIWRMMFDPNSNYDDLYWVGQRDAFRHVDFVNQY-------VDIKTTNIGQCADVNFTLNGD-MVVVDDQSSDTNTGIYL 211 (433)
T ss_dssp CCCEEEECTTTTTCEEEEECBTSCEEEEETTTTE-------EEEECCCCSCEEEEEECTTCC-EEEEECCSCTTSEEEEE
T ss_pred CCceEEEccccCCCEEEEEeCCCCEEEEECCCCE-------EEEeecCCCCccEEEECCCCC-EEEEcCCCCcccceEEE
Confidence 4578999985 22246666555899999986542 222222345688999999998 76554321 12 333
Q ss_pred EECCCCCCCCCeeEecccCCCeeEEEecCCCCeEEEEEeCCCcEEEEECCCCCCcceee-c-CCCCCEEEEEEcCCCCcE
Q 014472 255 WDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATGSTDKTVKLFDLRKISTALHTF-D-SHKEEVFQVGWNPKNETI 332 (424)
Q Consensus 255 ~d~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~-~-~~~~~v~~~~~sp~~~~~ 332 (424)
++..... .....+ ........++++|.+.+++++-..++.|+.+|..+ +.....+ . .....-..++|+|++..+
T Consensus 212 ~~~~~~~--~~~~~~-~~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~-g~~~~~~~~~~~~~~~~~ia~dpdG~~L 287 (433)
T 4hw6_A 212 FTRASGF--TERLSL-CNARGAKTCAVHPQNGKIYYTRYHHAMISSYDPAT-GTLTEEEVMMDTKGSNFHIVWHPTGDWA 287 (433)
T ss_dssp ECGGGTT--CCEEEE-EECSSBCCCEECTTTCCEEECBTTCSEEEEECTTT-CCEEEEEEECSCCSSCEEEEECTTSSEE
T ss_pred EECCCCe--eccccc-cccCCCCEEEEeCCCCeEEEEECCCCEEEEEECCC-CeEEEEEeccCCCCCcccEEEeCCCCEE
Confidence 3332211 111111 12345677899994444565655678899999875 3321121 1 112233579999999756
Q ss_pred EEEEeCCCeEEEeeCCCCCcccCCCccCCCCCeeeEEE------------cCCCCCcceEEe---------CCCCCcEEE
Q 014472 333 LASCCLGRRLMVWDLSRIDEEQTPEDAEDGPPELLFIH------------GGHTSKISDFSW---------NPCEDWVIS 391 (424)
Q Consensus 333 l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~------------~~h~~~v~~~~~---------~~~~~~~l~ 391 (424)
+++-...+.|..+++........ .+..+.-. ...-.....+++ .+++. +++
T Consensus 288 Yvad~~~~~I~~~~~d~~~~~~~-------~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~~g~-lyv 359 (433)
T 4hw6_A 288 YIIYNGKHCIYRVDYNRETGKLA-------VPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEEDEYD-FYF 359 (433)
T ss_dssp EEEETTTTEEEEEEBCTTTCCBC-------CCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSSCCEE-EEE
T ss_pred EEEeCCCCEEEEEeCCCCCcccC-------cEEEEEecCCCCccCCCcccceEEcCCccEEEEccccccccCCCCc-EEE
Confidence 66767778899988653211000 00000000 001123567888 67776 677
Q ss_pred EEeCCCcEEEEecC
Q 014472 392 SVAEDNILQIWQMA 405 (424)
Q Consensus 392 s~~~d~~i~iw~~~ 405 (424)
+-...++|+.++..
T Consensus 360 aD~~n~~I~~~~~~ 373 (433)
T 4hw6_A 360 CDRDSHTVRVLTPE 373 (433)
T ss_dssp EETTTTEEEEECTT
T ss_pred EECCCCEEEEECCC
Confidence 76777889888863
No 285
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=97.87 E-value=0.0021 Score=62.25 Aligned_cols=58 Identities=10% Similarity=-0.051 Sum_probs=35.3
Q ss_pred eEEEEECCCCCCCCCeeEec--ccC--------CCeeEEEecCCCC--eEEEEEeCCCcEEEEECCCCCCcceee
Q 014472 251 YLLIWDLRTPSVSKPVQSVV--AHQ--------SEVNCLAFNPFNE--WILATGSTDKTVKLFDLRKISTALHTF 313 (424)
Q Consensus 251 ~i~i~d~~~~~~~~~~~~~~--~~~--------~~v~~i~~~~~~~--~~l~~g~~dg~i~iwd~~~~~~~~~~~ 313 (424)
.|..+|.++++. +-.++ .|. .++. +...++|+ .+++.++.+|.+.++|..+ ++.+..+
T Consensus 273 ~v~Ald~~tG~~---~W~~~~~~~d~~d~~~~~~p~l-~~~~~~G~~~~~v~~~~~~G~l~~lD~~t-G~~~w~~ 342 (571)
T 2ad6_A 273 TIWGRDLDTGMA---KWGYQKTPHDEWDFAGVNQMVL-TDQPVNGKMTPLLSHIDRNGILYTLNREN-GNLIVAE 342 (571)
T ss_dssp EEEEEETTTCCE---EEEEESSTTCSSCCCCCCCCEE-EEEEETTEEEEEEEEECTTSEEEEEETTT-CCEEEEE
T ss_pred EEEEEecCCCcE---EEEecCCCCcccccccCCCCEE-EecccCCcEEEEEEEeCCCcEEEEEECCC-CCEEeee
Confidence 699999998774 22222 111 2221 22223453 4677888999999999987 5555443
No 286
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=97.86 E-value=0.0022 Score=56.36 Aligned_cols=207 Identities=10% Similarity=0.075 Sum_probs=117.4
Q ss_pred ceeEEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEec----CC--CCeeeEEe---cCCCCceEEEE
Q 014472 127 EVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRG----HS--TEGYGLSW---SKFKEGHLLSG 197 (424)
Q Consensus 127 ~v~~i~~~p~~~~~latg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~----h~--~~v~~l~~---~~~~~~~l~s~ 197 (424)
-..+++|.+....++++.-..|.|..|+.... ..... .+.+ .. ..+.+|.| .|.+. ++++.
T Consensus 14 yPE~~~wd~~~g~~~vs~l~~g~V~~~~~~~~--------~~~~~-~~~~~s~~g~~~~~~sGl~~~~~D~~gr-L~vv~ 83 (334)
T 2p9w_A 14 TPEDTIYDRTRQVFYQSNLYKGRIEVYNPKTQ--------SHFNV-VIDGASSNGDGEQQMSGLSLLTHDNSKR-LFAVM 83 (334)
T ss_dssp CCSCEEEETTTTEEEEEETTTTEEEEECTTTC--------CEEEE-CCTTTCCSSCCSEEEEEEEESSSSSCCE-EEEEE
T ss_pred CCcCccCcCCCCEEEEEeccCCEEEEEcCCCC--------eEEEE-ecCCccccCCCcceeeEEEEeccCCCCc-EEEEE
Confidence 34578998876656666558999999998641 11111 1111 11 13578999 57643 55543
Q ss_pred e-------------CCCcEEEEeCC---CCCCCCcccceeeeec-------CCcceeeEEeeCCCCcEEEEEeCC-CeEE
Q 014472 198 S-------------DDAQICLWDIN---AAPKNKSLEAMQIFKV-------HEGVVEDVAWHLRHEYLFGSVGDD-QYLL 253 (424)
Q Consensus 198 ~-------------~dg~i~vwd~~---~~~~~~~~~~~~~~~~-------~~~~v~~i~~~~~~~~~~~s~~~d-g~i~ 253 (424)
. .+..|..+|+. +++............+ -....++++..++|+ .+++++.. +.|.
T Consensus 84 ~~~~af~~~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~Gn-aYVt~s~~~~~I~ 162 (334)
T 2p9w_A 84 KNAKSFNFADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGN-SYVAFALGMPAIA 162 (334)
T ss_dssp EETTTTCTTSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSC-EEEEEEESSCEEE
T ss_pred cccccccccccccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCC-EEEeCCCCCCeEE
Confidence 3 26779999998 5543221110000001 113588999999986 56678877 7777
Q ss_pred EEECCCCCCCCCeeEe------cccCCCeeEEEecCCCCeEEEEEeCCCcEEEEECCCCCCcceeec--CC---CCCEEE
Q 014472 254 IWDLRTPSVSKPVQSV------VAHQSEVNCLAFNPFNEWILATGSTDKTVKLFDLRKISTALHTFD--SH---KEEVFQ 322 (424)
Q Consensus 254 i~d~~~~~~~~~~~~~------~~~~~~v~~i~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~--~~---~~~v~~ 322 (424)
.++..... +..+ .......+.|+++|++..+++..+ .|.|..+|++.+........ +. -.....
T Consensus 163 rV~pdG~~----~~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~-~g~L~~fD~~~pv~~~v~~~~~G~~~~~~~~dg 237 (334)
T 2p9w_A 163 RVSADGKT----VSTFAWESGNGGQRPGYSGITFDPHSNKLIAFGG-PRALTAFDVSKPYAWPEPVKINGDFGTLSGTEK 237 (334)
T ss_dssp EECTTSCC----EEEEEECCCCSSSCCSCSEEEEETTTTEEEEESS-SSSEEEEECSSSSCCCEECEESSCCCCCTTEEE
T ss_pred EEeCCCCE----EeeeeecCCCcccccCcceEEEeCCCCEEEEEcC-CCeEEEEcCCCCcceeecccccCCcccccCccc
Confidence 77765432 2211 111234779999999986555545 99999999985322001111 21 122333
Q ss_pred E-EEcCCCCcEEEEEeCCCeEEEeeCCC
Q 014472 323 V-GWNPKNETILASCCLGRRLMVWDLSR 349 (424)
Q Consensus 323 ~-~~sp~~~~~l~s~~~dg~i~iwd~~~ 349 (424)
+ .--.+|..+|++....+.+.+.+...
T Consensus 238 ilp~~~~G~vllV~~~~~~~~~l~S~Dg 265 (334)
T 2p9w_A 238 IVTVPVGNESVLVGARAPYAISFRSWDN 265 (334)
T ss_dssp EEEEEETTEEEEEEEETTEEEEEECSST
T ss_pred ccccccCCEEEEEEcCCCCEEEEECCCC
Confidence 3 22335654466666677666665544
No 287
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=97.80 E-value=0.015 Score=52.34 Aligned_cols=240 Identities=11% Similarity=0.061 Sum_probs=121.4
Q ss_pred CceeEEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEE---ecCCCCeeeEEecCC---CCceEEEEeC
Q 014472 126 GEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRL---RGHSTEGYGLSWSKF---KEGHLLSGSD 199 (424)
Q Consensus 126 ~~v~~i~~~p~~~~~latg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~---~~h~~~v~~l~~~~~---~~~~l~s~~~ 199 (424)
.....++|.|++. ++++ ...|.|++++ .. .......+ .........|+|+|+ +..+.++-..
T Consensus 31 ~~P~~ia~~pdG~-l~V~-e~~g~I~~i~-~g---------~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~ 98 (352)
T 2ism_A 31 EVPWALAFLPDGG-MLIA-ERPGRIRLFR-EG---------RLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTV 98 (352)
T ss_dssp SCEEEEEECTTSC-EEEE-ETTTEEEEEE-TT---------EEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEE
T ss_pred CCceEEEEcCCCe-EEEE-eCCCeEEEEE-CC---------CccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEec
Confidence 4567899999987 5554 5569999998 32 11111111 112346789999997 4433343332
Q ss_pred C-----CcEEEEeCCCCCCCCcccc-eeeee---cCCcceeeEEeeCCCCcEEEEEeC-------------CCeEEEEEC
Q 014472 200 D-----AQICLWDINAAPKNKSLEA-MQIFK---VHEGVVEDVAWHLRHEYLFGSVGD-------------DQYLLIWDL 257 (424)
Q Consensus 200 d-----g~i~vwd~~~~~~~~~~~~-~~~~~---~~~~~v~~i~~~~~~~~~~~s~~~-------------dg~i~i~d~ 257 (424)
. +.|..++...... ...+. +..+. ........++|.|++. ++++.+. .|.|.-++.
T Consensus 99 ~~~~~~~~v~r~~~~~~~~-~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~-Lyv~~G~~~~~~~~~d~~~~~g~I~ri~~ 176 (352)
T 2ism_A 99 AEGGLRNQVVRLRHLGERG-VLDRVVLDGIPARPHGLHSGGRIAFGPDGM-LYVTTGEVYERELAQDLASLGGKILRLTP 176 (352)
T ss_dssp CTTSSEEEEEEEEECSSCE-EEEEEEEEEECCCTTCCCCCCCEEECTTSC-EEEECCCTTCGGGGGCTTCSSSEEEEECT
T ss_pred CCCCCccEEEEEEeCCCCc-CceEEEEEeCCCCCCCCcCCceEEECCCCC-EEEEECCCCCCccccCCCCCceEEEEEcC
Confidence 2 5677787764311 11111 11121 1112346899999984 6655432 256666665
Q ss_pred CCCC-----------CCCCeeEecccCCCeeEEEecC-CCCeEEEEEeCCCc--------EEEEECCC------------
Q 014472 258 RTPS-----------VSKPVQSVVAHQSEVNCLAFNP-FNEWILATGSTDKT--------VKLFDLRK------------ 305 (424)
Q Consensus 258 ~~~~-----------~~~~~~~~~~~~~~v~~i~~~~-~~~~~l~~g~~dg~--------i~iwd~~~------------ 305 (424)
...- ....+.. .++ .....++|+| .+. ++++-..... |.+...-.
T Consensus 177 dG~~p~~npf~~~~~~~~~i~a-~G~-rnp~g~a~d~~~g~-l~v~d~g~~~~~~~~~dei~~i~~G~nyGwp~~~g~~~ 253 (352)
T 2ism_A 177 EGEPAPGNPFLGRRGARPEVYS-LGH-RNPQGLAWHPKTGE-LFSSEHGPSGEQGYGHDEVNLIVPGGNYGWPRVVGRGN 253 (352)
T ss_dssp TSSBCTTCTTTTCTTSCTTEEE-ECC-SEECCCEECTTTCC-EEEEEECC------CCCEEEEECTTCBCCTTTCCSCCC
T ss_pred CCCCCCCCcccCCCCCCccEEE-EcC-CCcccEEEECCCCC-EEEEEcCCCCCCCCCCeEEEEeccCCcCCCCcccCCCC
Confidence 4310 0001111 122 2367789999 555 5544333222 33332111
Q ss_pred ---CCCcceeecCCCCCEEEEEEcCCCCcEEEEEeCCCeEEEeeCCCCCcccCCCccCCCCCeeeEEEcCCCCCcceEEe
Q 014472 306 ---ISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPEDAEDGPPELLFIHGGHTSKISDFSW 382 (424)
Q Consensus 306 ---~~~~~~~~~~~~~~v~~~~~sp~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~ 382 (424)
...++..+.. ......++| .++ .++++.-..+.|...++......... ......+.. ...+.++++
T Consensus 254 ~~~~~~p~~~~~~-~~ap~G~~~-~~G-~l~v~~~~~~~v~~v~~~~~~~~~~~-------~~~~~~~~~-~~rp~~v~~ 322 (352)
T 2ism_A 254 DPRYRDPLYFWPQ-GFPPGNLAF-FRG-DLYVAGLRGQALLRLVLEGERGRWRV-------LRVETALSG-FGRLREVQV 322 (352)
T ss_dssp CTTSCCCSEECTT-CCCEEEEEE-ETT-EEEEEETTTTEEEEEEEEEETTEEEE-------EEEEEEEES-SCCEEEEEE
T ss_pred CCCCcCCeEecCC-CCCCcceEE-ECC-EEEEEECCCCEEEEEEECCCCcceee-------cchheeccc-CCCeeEEEE
Confidence 0123334432 345667777 345 46666666677777776543210000 000111122 346899999
Q ss_pred CCCCCcEEEEEe
Q 014472 383 NPCEDWVISSVA 394 (424)
Q Consensus 383 ~~~~~~~l~s~~ 394 (424)
.|+|. ++++..
T Consensus 323 ~pdG~-lyv~~~ 333 (352)
T 2ism_A 323 GPDGA-LYVTTS 333 (352)
T ss_dssp CTTSC-EEEEEC
T ss_pred CCCCc-EEEEEe
Confidence 99998 555543
No 288
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=97.78 E-value=0.00032 Score=69.35 Aligned_cols=234 Identities=6% Similarity=-0.095 Sum_probs=116.1
Q ss_pred eeEEEecCCCCcEEEEEe-cCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCCeeeEEecCCCCceEEEEe-CC-----
Q 014472 128 VNRARYMPQNPFLIATKT-VSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGS-DD----- 200 (424)
Q Consensus 128 v~~i~~~p~~~~~latg~-~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~-~d----- 200 (424)
..++++.+++. +++.|+ .++.+.+||..+ ..+.....+.. ...-.+++..+++. +++.|+ .+
T Consensus 245 ~~~~~~~~~g~-lyv~GG~~~~~v~~yd~~t--------~~W~~~~~~~~-~R~~~s~~~~~dg~-iyv~GG~~~~~~~~ 313 (656)
T 1k3i_A 245 CPGISMDGNGQ-IVVTGGNDAKKTSLYDSSS--------DSWIPGPDMQV-ARGYQSSATMSDGR-VFTIGGSWSGGVFE 313 (656)
T ss_dssp SCEEEECTTSC-EEEECSSSTTCEEEEEGGG--------TEEEECCCCSS-CCSSCEEEECTTSC-EEEECCCCCSSSCC
T ss_pred cccccCCCCCC-EEEeCCCCCCceEEecCcC--------CceeECCCCCc-cccccceEEecCCe-EEEEeCcccCCccc
Confidence 33466677776 777777 456899999876 22222211111 11123455556666 677777 34
Q ss_pred CcEEEEeCCCCCCCCcccce-----eeeecCCcceeeEEeeCCCCcEEEEEeCC---------CeEEEEECCCCCCCCCe
Q 014472 201 AQICLWDINAAPKNKSLEAM-----QIFKVHEGVVEDVAWHLRHEYLFGSVGDD---------QYLLIWDLRTPSVSKPV 266 (424)
Q Consensus 201 g~i~vwd~~~~~~~~~~~~~-----~~~~~~~~~v~~i~~~~~~~~~~~s~~~d---------g~i~i~d~~~~~~~~~~ 266 (424)
..+.+||..+..- ..+ ..+..... ...+..++ .+++.++.+ ..+..||..+.....+.
T Consensus 314 ~~~e~yd~~t~~W----~~~~~~~~~p~~~~~~---~~~~~~~~-~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~~ 385 (656)
T 1k3i_A 314 KNGEVYSPSSKTW----TSLPNAKVNPMLTADK---QGLYRSDN-HAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSA 385 (656)
T ss_dssp CCEEEEETTTTEE----EEETTSCSGGGCCCCT---TGGGTTTC-SCCEEECGGGCEEECCSSSEEEEEECSTTCEEEEE
T ss_pred ccceEeCCCCCcc----eeCCCccccccccccc---cceeecCC-ceEEEECCCCcEEEecCccceeeeecCCcceeecC
Confidence 5689999876421 111 00000000 01111222 344455444 35678888775421111
Q ss_pred eEecc------cCCCeeEEEecCCCCeEEEEEeCCC-----------cEEEEECCCCCCcceee--cCCCCC-EEEEEEc
Q 014472 267 QSVVA------HQSEVNCLAFNPFNEWILATGSTDK-----------TVKLFDLRKISTALHTF--DSHKEE-VFQVGWN 326 (424)
Q Consensus 267 ~~~~~------~~~~v~~i~~~~~~~~~l~~g~~dg-----------~i~iwd~~~~~~~~~~~--~~~~~~-v~~~~~s 326 (424)
..... ....-.++.+...+..+++.|+.++ .|.+||..+. .-.... ..+... -.++...
T Consensus 386 ~~~~~~~~~~~~~~~~~av~~~~~~~~i~v~GG~~~~~~~~~~~~~~~v~~yd~~~~-~W~~~~~~~mp~~R~~~~~~~l 464 (656)
T 1k3i_A 386 GKRQSNRGVAPDAMCGNAVMYDAVKGKILTFGGSPDYQDSDATTNAHIITLGEPGTS-PNTVFASNGLYFARTFHTSVVL 464 (656)
T ss_dssp EECEETTEECCCCBTCEEEEEETTTTEEEEECCBSSSSSSBCCCCEEEEECCSTTSC-CEEEECTTCCSSCCBSCEEEEC
T ss_pred CccccccccCCCCCCCceEeccCCCCeEEEEeCCCCCCCCCcCCcceEEEcCCCCCC-CeeEEccCCCCCCcccCCeEEC
Confidence 11110 0112345555444455888888542 5778887652 211111 112222 2345667
Q ss_pred CCCCcEEEEEeCC-----------CeEEEeeCCCCCcccCCCccCCCCCeeeEEEcCCCCCcceEEeCCCCCcEEEEEeC
Q 014472 327 PKNETILASCCLG-----------RRLMVWDLSRIDEEQTPEDAEDGPPELLFIHGGHTSKISDFSWNPCEDWVISSVAE 395 (424)
Q Consensus 327 p~~~~~l~s~~~d-----------g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~ 395 (424)
|++. +++.|+.+ ..+.+||..+..-.. +..............+.|+++ +++.||.
T Consensus 465 ~~g~-i~v~GG~~~~~~~~~~~~~~~v~~ydp~t~~W~~------------~~~~~~~R~~hs~a~ll~dg~-v~v~GG~ 530 (656)
T 1k3i_A 465 PDGS-TFITGGQRRGIPFEDSTPVFTPEIYVPEQDTFYK------------QNPNSIVRVYHSISLLLPDGR-VFNGGGG 530 (656)
T ss_dssp TTSC-EEEECCBSBCCTTCCCSBCCCCEEEEGGGTEEEE------------CCCCSSCCCTTEEEEECTTSC-EEEEECC
T ss_pred CCCC-EEEECCcccCcCcCCCCcccceEEEcCCCCceee------------cCCCCCccccccHhhcCCCcE-EEecCCC
Confidence 7885 77777754 457888886532111 000111111223345678998 7888874
No 289
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=97.73 E-value=0.0075 Score=59.57 Aligned_cols=54 Identities=6% Similarity=-0.000 Sum_probs=36.7
Q ss_pred CCcEEEEECCCCCCcceeecCCCCCEEEEEEcCCCCcEEEEEeCCCeEEEeeCCCCC
Q 014472 295 DKTVKLFDLRKISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRID 351 (424)
Q Consensus 295 dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~s~~~dg~i~iwd~~~~~ 351 (424)
+|.|..||+++ ++.+-....+ .+.....+...+. +++.++.|+.++.||..++.
T Consensus 437 ~g~l~A~D~~t-G~~~W~~~~~-~~~~~~~~~t~gg-~vf~g~~dg~l~a~d~~tG~ 490 (668)
T 1kv9_A 437 SGALLAWDPVK-QKAAWKVPYP-THWNGGTLSTAGN-LVFQGTAAGQMHAYSADKGE 490 (668)
T ss_dssp EEEEEEEETTT-TEEEEEEEES-SSCCCCEEEETTT-EEEEECTTSEEEEEETTTCC
T ss_pred cceEEEEeCCC-CcEEEEccCC-CCCcCceeEeCCC-EEEEECCcccchhhhhhcCh
Confidence 47899999988 5555554432 2333333334454 67788999999999999864
No 290
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=97.72 E-value=0.0081 Score=58.10 Aligned_cols=54 Identities=17% Similarity=0.040 Sum_probs=34.7
Q ss_pred CCcEEEEECCCCCCcceeecCCCCCEEEEEEcCCCCcEEEEEeCCCeEEEeeCCCCC
Q 014472 295 DKTVKLFDLRKISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRID 351 (424)
Q Consensus 295 dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~s~~~dg~i~iwd~~~~~ 351 (424)
+|.|..||+.+ ++.+-.+... ..+.+......+. +++.++.||.|..||.++++
T Consensus 443 ~g~l~a~D~~t-G~~~W~~~~~-~~~~~~~~~t~gg-~v~~g~~dg~l~a~D~~tG~ 496 (571)
T 2ad6_A 443 MGQIRAFDLTT-GKAKWTKWEK-FAAWGGTLYTKGG-LVWYATLDGYLKALDNKDGK 496 (571)
T ss_dssp CEEEEEECTTT-CCEEEEEEES-SCCCSBCEEETTT-EEEEECTTSEEEEEETTTCC
T ss_pred CCeEEEEECCC-CCEEEEecCC-CCccceeEEECCC-EEEEEcCCCeEEEEECCCCC
Confidence 57899999987 5555554432 2222222222343 56678999999999999874
No 291
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=97.68 E-value=0.00072 Score=63.42 Aligned_cols=171 Identities=12% Similarity=0.094 Sum_probs=102.4
Q ss_pred ceeeEEeeC-CCCcEEEEEeCCCeEEEEECCCCCCCCCeeEecc----cCCCeeEEEe-------cCCCCeEEEEEeCCC
Q 014472 229 VVEDVAWHL-RHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVA----HQSEVNCLAF-------NPFNEWILATGSTDK 296 (424)
Q Consensus 229 ~v~~i~~~~-~~~~~~~s~~~dg~i~i~d~~~~~~~~~~~~~~~----~~~~v~~i~~-------~~~~~~~l~~g~~dg 296 (424)
....|+|+| ++.+|+++....+.|++.|+..+.. ..+.. .......|+| ++++.+++++-..++
T Consensus 140 ~p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v----~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~ 215 (496)
T 3kya_A 140 DNGRLAFDPLNKDHLYICYDGHKAIQLIDLKNRML----SSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDG 215 (496)
T ss_dssp SEEEEEEETTEEEEEEEEEETEEEEEEEETTTTEE----EEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCT
T ss_pred CCCEEEEccCCCCEEEEEECCCCeEEEEECCCCEE----EEEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCCC
Confidence 467899998 4667877766667899999987553 22211 1235899999 999986555544442
Q ss_pred ------cEEEEECCCCCCcc-----eeecCCCCCEEEEEEcCCCCcEEEEEeCCCeEEEeeCC-------CCCcccCCCc
Q 014472 297 ------TVKLFDLRKISTAL-----HTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLS-------RIDEEQTPED 358 (424)
Q Consensus 297 ------~i~iwd~~~~~~~~-----~~~~~~~~~v~~~~~sp~~~~~l~s~~~dg~i~iwd~~-------~~~~~~~~~~ 358 (424)
.|.+++....+... ..+.. -.....++.+|++..++++-..++.|..+|+. ++........
T Consensus 216 ~~~~~~~V~~i~r~~~G~~~~~~~~~~v~~-~~~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~ 294 (496)
T 3kya_A 216 KGDESPSVYIIKRNADGTFDDRSDIQLIAA-YKQCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVK 294 (496)
T ss_dssp TGGGEEEEEEEECCTTSCCSTTSCEEEEEE-ESCCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGG
T ss_pred CcccCceEEEEecCCCCceeecccceeecc-CCCceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeeccccc
Confidence 26677633311211 12221 12446788899766778788888899999987 3321000000
Q ss_pred cCCCCCeeeEEEcCCCCCcceEEeCCCCCcEEEEEeCCCcEEEEecC
Q 014472 359 AEDGPPELLFIHGGHTSKISDFSWNPCEDWVISSVAEDNILQIWQMA 405 (424)
Q Consensus 359 ~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iw~~~ 405 (424)
...+....++.. +.....+.++|+|++..++++-.....|+.+++.
T Consensus 295 ~~~g~~~~l~~~-~~~~~p~~ia~~p~G~~lYvaD~~~h~I~kid~d 340 (496)
T 3kya_A 295 NNPNTFKQLFTI-ADPSWEFQIFIHPTGKYAYFGVINNHYFMRSDYD 340 (496)
T ss_dssp GCTTTEEEEEEC-SSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEE
T ss_pred ccccccceeEec-CCCCCceEEEEcCCCCEEEEEeCCCCEEEEEecC
Confidence 000000122222 2234467899999999666666677888886654
No 292
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=97.67 E-value=0.022 Score=55.20 Aligned_cols=59 Identities=10% Similarity=-0.024 Sum_probs=36.7
Q ss_pred CeEEEEECCCCCCCCCeeEec--ccC--------CCeeEEEec-CCCC--eEEEEEeCCCcEEEEECCCCCCcceee
Q 014472 250 QYLLIWDLRTPSVSKPVQSVV--AHQ--------SEVNCLAFN-PFNE--WILATGSTDKTVKLFDLRKISTALHTF 313 (424)
Q Consensus 250 g~i~i~d~~~~~~~~~~~~~~--~~~--------~~v~~i~~~-~~~~--~~l~~g~~dg~i~iwd~~~~~~~~~~~ 313 (424)
+.|..+|.++++. +-.++ .|. .++. +... .+|+ .+++.++.+|.++++|.++ ++++..+
T Consensus 291 ~~v~AlD~~TG~~---~W~~q~~~~d~wd~~~~~~p~l-~~~~~~~G~~~~~v~~~~~~G~l~~lD~~t-G~~lw~~ 362 (582)
T 1flg_A 291 SGQVGVDPSSGEV---KWFYQHTPNDAWDFSGNNELVL-FDYKAKDGKIVKATAHADRNGFFYVVDRSN-GKLQNAF 362 (582)
T ss_dssp SEEEEECTTTCCE---EEEEESSTTCCSCCCCCCCCEE-EEEECSSSCEEEEEEEECTTSEEEEEETTT-CCEEEEE
T ss_pred ceEEEEeCCCCCE---EEEEeCCCCCcccccCCCCcEE-EeeecCCCCEEEEEEEECCCceEEEEECCC-CCEeccc
Confidence 6899999998875 22222 221 1221 2221 3453 3688899999999999987 5555443
No 293
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=97.65 E-value=0.016 Score=51.40 Aligned_cols=191 Identities=9% Similarity=0.160 Sum_probs=115.3
Q ss_pred eEEEEeCCCcEEEEeCCCCCCCCcccceeeeecCCcceeeEEeeCC----CC---cEEEEEeC--CCeEEEEECCCCCCC
Q 014472 193 HLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLR----HE---YLFGSVGD--DQYLLIWDLRTPSVS 263 (424)
Q Consensus 193 ~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~----~~---~~~~s~~~--dg~i~i~d~~~~~~~ 263 (424)
+++.....+-+.+||+ +++ .+..+. .+.++.+..-|. ++ ..+++.-. +.+|.+|++....
T Consensus 42 ~ii~t~k~~gL~Vydl-~G~------~l~~~~--~g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~-- 110 (355)
T 3amr_A 42 KLITTNKKSGLVVYSL-DGK------MLHSYN--TGKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKN-- 110 (355)
T ss_dssp EEEEEETTTEEEEEET-TSC------EEEEEC--CSCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTT--
T ss_pred EEEEEcCCCCEEEEcC-CCc------EEEEcc--CCCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCC--
Confidence 5777778889999999 442 223332 245666665552 11 22444444 6889999774221
Q ss_pred CCeeEecc------cC-CCeeEEEe--cCC-CCeEEEEEeCCCcEEEEECCCC------CCcceeecCCCCCEEEEEEcC
Q 014472 264 KPVQSVVA------HQ-SEVNCLAF--NPF-NEWILATGSTDKTVKLFDLRKI------STALHTFDSHKEEVFQVGWNP 327 (424)
Q Consensus 264 ~~~~~~~~------~~-~~v~~i~~--~~~-~~~~l~~g~~dg~i~iwd~~~~------~~~~~~~~~~~~~v~~~~~sp 327 (424)
.++..+.. .. ..+..+++ +|. +..++++...+|.+..|++... .+.++++.. .+.+-.+...+
T Consensus 111 ~~l~~i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~l-gsq~EgcvvDd 189 (355)
T 3amr_A 111 GTLQSMTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFKM-NSQTEGMAADD 189 (355)
T ss_dssp CCEEECSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEEC-SSCEEEEEEET
T ss_pred CceeeccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEecC-CCCcceEEEcC
Confidence 12333311 11 55666777 774 4445777788899999998421 245666665 46788888988
Q ss_pred CCCcEEEEEeCCCeEEEeeCCCCCcccCCCccCCCCCeeeEEEc-CC-CCCcceEEe--CCCCC-cEEEEEeCCCcEEEE
Q 014472 328 KNETILASCCLGRRLMVWDLSRIDEEQTPEDAEDGPPELLFIHG-GH-TSKISDFSW--NPCED-WVISSVAEDNILQIW 402 (424)
Q Consensus 328 ~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~-~h-~~~v~~~~~--~~~~~-~~l~s~~~d~~i~iw 402 (424)
... .|+.+-.+.-|..++...... ....++.... ++ ...+..+++ .++++ |+|+|+-.++.+.||
T Consensus 190 ~~g-~Lyv~eEd~GIw~~da~p~~~---------~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQG~~s~~Vy 259 (355)
T 3amr_A 190 EYG-RLYIAEEDEAIWKFSAEPDGG---------SNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQGNSSYAIY 259 (355)
T ss_dssp TTT-EEEEEETTTEEEEEECSTTSC---------SCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEGGGTEEEEE
T ss_pred CCC-eEEEecccceEEEEeCCcCCC---------CCceEEEEecCCccccCcceEEEEecCCCCEEEEEEcCCCCEEEEE
Confidence 775 577888885555555432110 0113343332 22 235777777 55666 677777678899999
Q ss_pred ecC
Q 014472 403 QMA 405 (424)
Q Consensus 403 ~~~ 405 (424)
+..
T Consensus 260 dr~ 262 (355)
T 3amr_A 260 DRQ 262 (355)
T ss_dssp ESS
T ss_pred ECC
Confidence 996
No 294
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=97.59 E-value=0.016 Score=50.96 Aligned_cols=165 Identities=9% Similarity=0.109 Sum_probs=101.7
Q ss_pred EEecCCCCeeeEEecCCCCceEEEEe-CCCcEEEEeCCCCCCCCcccceeeeec------CCcceeeEEe---eCCCCcE
Q 014472 173 RLRGHSTEGYGLSWSKFKEGHLLSGS-DDAQICLWDINAAPKNKSLEAMQIFKV------HEGVVEDVAW---HLRHEYL 242 (424)
Q Consensus 173 ~~~~h~~~v~~l~~~~~~~~~l~s~~-~dg~i~vwd~~~~~~~~~~~~~~~~~~------~~~~v~~i~~---~~~~~~~ 242 (424)
.+.....-.-+++|.+... .|..++ ..|+|..|+...+... .+ .+.. ....+..|.| .|.+ .+
T Consensus 7 ~~~~~~~yPE~~~wd~~~g-~~~vs~l~~g~V~~~~~~~~~~~----~~-~~~~~s~~g~~~~~~sGl~~~~~D~~g-rL 79 (334)
T 2p9w_A 7 DVKVKNLTPEDTIYDRTRQ-VFYQSNLYKGRIEVYNPKTQSHF----NV-VIDGASSNGDGEQQMSGLSLLTHDNSK-RL 79 (334)
T ss_dssp EECCTTCCCSCEEEETTTT-EEEEEETTTTEEEEECTTTCCEE----EE-CCTTTCCSSCCSEEEEEEEESSSSSCC-EE
T ss_pred EecCcccCCcCccCcCCCC-EEEEEeccCCEEEEEcCCCCeEE----EE-ecCCccccCCCcceeeEEEEeccCCCC-cE
Confidence 3444444456899988666 455555 7999999998644211 11 1111 1124578999 5875 46
Q ss_pred EEEEe-------------CCCeEEEEECC---CCCCCCCeeEecc-----------cCCCeeEEEecCCCCeEEEEEeCC
Q 014472 243 FGSVG-------------DDQYLLIWDLR---TPSVSKPVQSVVA-----------HQSEVNCLAFNPFNEWILATGSTD 295 (424)
Q Consensus 243 ~~s~~-------------~dg~i~i~d~~---~~~~~~~~~~~~~-----------~~~~v~~i~~~~~~~~~l~~g~~d 295 (424)
+++.. .+..|..||+. +++... ...+.. -......|+..++|+ ..++++.-
T Consensus 80 ~vv~~~~~af~~~g~~~~g~~~v~~~Dl~~~~tg~~~~-~~dL~~~~~~~~~~~g~~~~~~nDvavD~~Gn-aYVt~s~~ 157 (334)
T 2p9w_A 80 FAVMKNAKSFNFADQSSHGASSFHSFNLPLSENSKPVW-SVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGN-SYVAFALG 157 (334)
T ss_dssp EEEEEETTTTCTTSCCSSSCCEEEEEESSCCTTCCCSE-EEESHHHHHHHHHHHSSCCEEEEEEEECTTSC-EEEEEEES
T ss_pred EEEEcccccccccccccCCCCEEEEEcCCcCCCCCEEE-EecCccccccccccccccccCCceeEECCCCC-EEEeCCCC
Confidence 65433 26789999998 555311 111111 112478999999997 57777777
Q ss_pred -CcEEEEECCCCCCcceeec------CCCCCEEEEEEcCCCCcEEEEEeCCCeEEEeeCCC
Q 014472 296 -KTVKLFDLRKISTALHTFD------SHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSR 349 (424)
Q Consensus 296 -g~i~iwd~~~~~~~~~~~~------~~~~~v~~~~~sp~~~~~l~s~~~dg~i~iwd~~~ 349 (424)
+.|..++... +.+..+. ......+.++++|++..+++..+ .|.|..+|+..
T Consensus 158 ~~~I~rV~pdG--~~~~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~-~g~L~~fD~~~ 215 (334)
T 2p9w_A 158 MPAIARVSADG--KTVSTFAWESGNGGQRPGYSGITFDPHSNKLIAFGG-PRALTAFDVSK 215 (334)
T ss_dssp SCEEEEECTTS--CCEEEEEECCCCSSSCCSCSEEEEETTTTEEEEESS-SSSEEEEECSS
T ss_pred CCeEEEEeCCC--CEEeeeeecCCCcccccCcceEEEeCCCCEEEEEcC-CCeEEEEcCCC
Confidence 7777776653 2222221 11234679999999975444444 99999999884
No 295
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=97.58 E-value=0.064 Score=51.98 Aligned_cols=54 Identities=11% Similarity=-0.008 Sum_probs=32.9
Q ss_pred CCcEEEEECCCCCCcceeecCCCCCEEEEEEcCCCCcEEEEEeCCCeEEEeeCCCCC
Q 014472 295 DKTVKLFDLRKISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRID 351 (424)
Q Consensus 295 dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~s~~~dg~i~iwd~~~~~ 351 (424)
.|.|..||+++ ++.+-.... ..++..-.....+. +++.++.|+.++.||.++++
T Consensus 452 ~G~l~A~D~~t-G~~~W~~~~-~~~~~~g~~~tagg-~vf~gt~dg~l~A~D~~tG~ 505 (599)
T 1w6s_A 452 LGQIKAYNAIT-GDYKWEKME-RFAVWGGTMATAGD-LVFYGTLDGYLKARDSDTGD 505 (599)
T ss_dssp CEEEEEECTTT-CCEEEEEEE-SSCCCSBCEEETTT-EEEEECTTSEEEEEETTTCC
T ss_pred cCeEEEEECCC-CCEEeEecC-CCCccCcceEecCC-EEEEECCCCeEEEEECCCCC
Confidence 46788888887 454444431 11111111112343 56778999999999999874
No 296
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=97.57 E-value=0.043 Score=53.10 Aligned_cols=81 Identities=6% Similarity=0.069 Sum_probs=46.3
Q ss_pred CCcEEEEECCCCCCcceeecCCCCCEEEEEEcCCCCcEEEEEeCCCeEEEeeCCCCCcccCCCccCCCCCeeeEEEcCCC
Q 014472 295 DKTVKLFDLRKISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPEDAEDGPPELLFIHGGHT 374 (424)
Q Consensus 295 dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~ 374 (424)
+|.|..||+++ ++.+-...... ++..-.....+. +++.++.||.++.||.++++ .+..+....
T Consensus 465 ~G~l~A~D~~t-G~~~W~~~~~~-~~~~g~~~tagg-lvf~g~~dg~l~A~D~~tG~--------------~lW~~~~~~ 527 (582)
T 1flg_A 465 VGSLRAMDPVS-GKVVWEHKEHL-PLWAGVLATAGN-LVFTGTGDGYFKAFDAKSGK--------------ELWKFQTGS 527 (582)
T ss_dssp SEEEEEECTTT-CCEEEEEEESS-CCCSCCEEETTT-EEEEECTTSEEEEEETTTCC--------------EEEEEECSS
T ss_pred cceEEEEECCC-CCEEEEecCCC-CCcccceEeCCC-EEEEECCCCcEEEEECCCCC--------------EEEEecCCC
Confidence 57899999988 55544443221 221111111243 67779999999999999874 344443322
Q ss_pred CC-cceEEeCCCCCcEEEE
Q 014472 375 SK-ISDFSWNPCEDWVISS 392 (424)
Q Consensus 375 ~~-v~~~~~~~~~~~~l~s 392 (424)
.. -.-+.|..+|+..+++
T Consensus 528 g~~a~P~~y~~~G~qYv~~ 546 (582)
T 1flg_A 528 GIVSPPITWEQDGEQYLGV 546 (582)
T ss_dssp CCCSCCEEEEETTEEEEEE
T ss_pred CcccCceEEEECCEEEEEE
Confidence 21 1226666777744443
No 297
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=97.50 E-value=0.033 Score=54.01 Aligned_cols=59 Identities=10% Similarity=-0.026 Sum_probs=36.1
Q ss_pred CeEEEEECCCCCCCCCeeEecc--cC--------CCeeEEEec-CCCC--eEEEEEeCCCcEEEEECCCCCCcceee
Q 014472 250 QYLLIWDLRTPSVSKPVQSVVA--HQ--------SEVNCLAFN-PFNE--WILATGSTDKTVKLFDLRKISTALHTF 313 (424)
Q Consensus 250 g~i~i~d~~~~~~~~~~~~~~~--~~--------~~v~~i~~~-~~~~--~~l~~g~~dg~i~iwd~~~~~~~~~~~ 313 (424)
+.|..+|.++++. +-.++. |. .++. +... .+|+ .+++.++.+|.+.++|.++ ++++...
T Consensus 278 ~sv~Ald~~TG~~---~W~~q~~~~d~wd~d~~~~p~l-~d~~~~~G~~~~~v~~~~~~G~l~~lD~~t-G~~lw~~ 349 (599)
T 1w6s_A 278 MTIFGRDADTGEA---KFGYQKTPHDEWDYAGVNVMML-SEQKDKDGKARKLLTHPDRNGIVYTLDRTD-GALVSAN 349 (599)
T ss_dssp SEEEEEETTTCCE---EEEEESSTTCSSCCCCCCCCEE-EEEECTTSCEEEEEEEECTTSEEEEEETTT-CCEEEEE
T ss_pred ceEEEEeCCCCce---eeEeecCCCccccccCCCccEE-EeccccCCcEEEEEEEECCCcEEEEEECCC-CCEeecc
Confidence 4799999998774 222221 21 1121 2222 3453 4677889999999999988 5555443
No 298
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=97.47 E-value=0.018 Score=51.59 Aligned_cols=195 Identities=11% Similarity=0.112 Sum_probs=108.7
Q ss_pred CeeeEEecCCCCceEEEEe-------------CCCcEEEEeCCCCCCCCcccceee----eecCCcceeeEEeeC--CCC
Q 014472 180 EGYGLSWSKFKEGHLLSGS-------------DDAQICLWDINAAPKNKSLEAMQI----FKVHEGVVEDVAWHL--RHE 240 (424)
Q Consensus 180 ~v~~l~~~~~~~~~l~s~~-------------~dg~i~vwd~~~~~~~~~~~~~~~----~~~~~~~v~~i~~~~--~~~ 240 (424)
..-.+...|+| ++++++ .+|.|.++|+++.... ...+.. +.........|.+.+ ++.
T Consensus 51 G~EDi~~~~~G--~~~~s~~~~~pg~~~~~~~~~G~I~~~d~~~~~~~--~~~l~~~g~~~~~~~f~PhGi~~~~d~dg~ 126 (355)
T 3sre_A 51 GSEDLEILPNG--LAFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPA--VSELEIIGNTLDISSFNPHGISTFIDDDNT 126 (355)
T ss_dssp CCCEEEECTTS--EEEEEECCC-----------CCEEEEEETTSSSCC--EEECEEECSSCCGGGCCEEEEEEEECTTCC
T ss_pred CcceeEEcCCC--eEEEEeccccCCCcccCCCCCCeEEEEecCCCCCc--eEEEEccCCCCCcCceeeeeeEEEECCCCc
Confidence 34566666754 344444 6899999999743211 111111 111234566777765 343
Q ss_pred -cEEEEEeC--CCeEEEEECCCCCC-CCCeeEeccc-CCCeeEEEecCCCCeEEEEEeC-----------------CCcE
Q 014472 241 -YLFGSVGD--DQYLLIWDLRTPSV-SKPVQSVVAH-QSEVNCLAFNPFNEWILATGST-----------------DKTV 298 (424)
Q Consensus 241 -~~~~s~~~--dg~i~i~d~~~~~~-~~~~~~~~~~-~~~v~~i~~~~~~~~~l~~g~~-----------------dg~i 298 (424)
+++++-.. +.+|.+|++..... ...+..+.+. -...+.+.+.++|. +.++... .|.|
T Consensus 127 ~~L~Vvnh~~~~s~ielf~~d~~~~~~~~~~~~~g~~~~~pND~~v~~~G~-fyvt~~~~ftd~~~~~~e~~~~~~~g~v 205 (355)
T 3sre_A 127 VYLLVVNHPGSSSTVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVGPEH-FYATNDHYFIDPYLKSWEMHLGLAWSFV 205 (355)
T ss_dssp EEEEEEECSTTCCEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEETTE-EEEEESCSCSSHHHHHHHHHTTCCCEEE
T ss_pred EEEEEEECCCCCCeEEEEEEECCCCEEEEEeccccCCCCCCceEEEeCCCC-EEecCCcEeCCcccccchhhccCCccEE
Confidence 46655444 56788888765432 1112222221 24578999999886 4555431 2345
Q ss_pred EEEECCCCCCcceeecCCCCCEEEEEEcCCCCcEEEEEeCCCeEEEeeCCCCCcccCCCccCCCCCeeeEEEcCCCCCcc
Q 014472 299 KLFDLRKISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPEDAEDGPPELLFIHGGHTSKIS 378 (424)
Q Consensus 299 ~iwd~~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~ 378 (424)
.-+|.. . +..+...-...+.++|+|+++.++++-+..+.|..|++...... .....+. .....-
T Consensus 206 yr~d~~---~-~~~~~~~l~~pNGia~spDg~~lYvadt~~~~I~~~~~~~~g~l-----------~~~~~~~-~~g~PD 269 (355)
T 3sre_A 206 TYYSPN---D-VRVVAEGFDFANGINISPDGKYVYIAELLAHKIHVYEKHANWTL-----------TPLRVLS-FDTLVD 269 (355)
T ss_dssp EEECTT---C-CEEEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSCE-----------EEEEEEE-CSSEEE
T ss_pred EEEECC---e-EEEeecCCcccCcceECCCCCEEEEEeCCCCeEEEEEECCCCcE-----------ecCEEEe-CCCCCc
Confidence 555442 2 22222223457899999999877777777889999998642211 1111121 134567
Q ss_pred eEEeCC-CCCcEEEEEeCC
Q 014472 379 DFSWNP-CEDWVISSVAED 396 (424)
Q Consensus 379 ~~~~~~-~~~~~l~s~~~d 396 (424)
.+++.+ +|. +.+++..+
T Consensus 270 Gi~vD~e~G~-lwva~~~~ 287 (355)
T 3sre_A 270 NISVDPVTGD-LWVGCHPN 287 (355)
T ss_dssp EEEECTTTCC-EEEEEESC
T ss_pred eEEEeCCCCc-EEEEecCC
Confidence 788998 588 56655433
No 299
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=97.43 E-value=0.1 Score=50.80 Aligned_cols=161 Identities=7% Similarity=0.005 Sum_probs=104.8
Q ss_pred CCeeeEEecCCCCceEEEEeCCCcEEEEeCCCCCCCCcccceeeeecCCcceeeEEeeCCCCcEEEEEeCCCeEEEEECC
Q 014472 179 TEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLR 258 (424)
Q Consensus 179 ~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~~s~~~dg~i~i~d~~ 258 (424)
..+.+|+|.+.+..++++-...+.|..+++..... .......-.....+++...+.+++.+-+..+.|.+.++.
T Consensus 349 ~~~~~ld~d~~~~~ly~sD~~~~~I~r~~~~g~~~------~~v~~~~~~~p~GlAvD~~~~~lY~tD~~~~~I~v~~~~ 422 (619)
T 3s94_A 349 RHAIAIDYDPVEGYIYWTDDEVRAIRRSFIDGSGS------QFVVTAQIAHPDGIAVDWVARNLYWTDTGTDRIEVTRLN 422 (619)
T ss_dssp SSEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC------EEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred CccEEEEEEcCCCeEEEEeCCCCeEEEEEcCCCcc------EEEEECCCCCcCceEEecccCcEEEEeCCCCcEEEEeCC
Confidence 45788999986664455545578899998875421 111222234677899988777888887788999999987
Q ss_pred CCCCCCCeeEecccCCCeeEEEecCCCCeEEEEEeC-CCcEEEEECCCCCCcceeecCCCCCEEEEEEcCCCCcEEEEEe
Q 014472 259 TPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATGST-DKTVKLFDLRKISTALHTFDSHKEEVFQVGWNPKNETILASCC 337 (424)
Q Consensus 259 ~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~l~~g~~-dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~s~~ 337 (424)
.... .......-.....|+++|....++++-.. .+.|...++.. ..........-...+.|++++.+..++.+-+
T Consensus 423 G~~~---~~l~~~~l~~P~~iavdp~~G~ly~tD~g~~~~I~r~~~dG-~~~~~l~~~~l~~P~GlalD~~~~~LY~aD~ 498 (619)
T 3s94_A 423 GTMR---KILISEDLEEPRAIVLDPMVGYMYWTDWGEIPKIERAALDG-SDRVVLVNTSLGWPNGLALDYDEGKIYWGDA 498 (619)
T ss_dssp SCSC---EEEECTTCCSEEEEEEETTTTEEEEEECSSSCEEEEEETTS-CSCEEEECSSCSCEEEEEEETTTTEEEEEET
T ss_pred CCeE---EEEEECCCCCeeeEEEEcCCCcEEEecCCCCCEEEEEccCC-CccEEEEeCCCCCCeeeEEcccCCEEEEEEC
Confidence 6431 11222234578999999976655555422 35677777654 2222222333457889999987766666666
Q ss_pred CCCeEEEeeCCC
Q 014472 338 LGRRLMVWDLSR 349 (424)
Q Consensus 338 ~dg~i~iwd~~~ 349 (424)
..+.|..+++..
T Consensus 499 ~~~~I~~~~~dG 510 (619)
T 3s94_A 499 KTDKIEVMNTDG 510 (619)
T ss_dssp TTTEEEEEESSS
T ss_pred CCCEEEEEecCC
Confidence 677898888864
No 300
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=97.42 E-value=0.064 Score=48.07 Aligned_cols=194 Identities=12% Similarity=0.173 Sum_probs=111.3
Q ss_pred ceeEEEecCCCCcEEEEE------------ecCCeEEEEeCCCCCCCCCCCCCCCCcEEEec-----CCCCeeeEEecC-
Q 014472 127 EVNRARYMPQNPFLIATK------------TVSAEVYVFDYSKHPSKPPLDGACSPDLRLRG-----HSTEGYGLSWSK- 188 (424)
Q Consensus 127 ~v~~i~~~p~~~~~latg------------~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~-----h~~~v~~l~~~~- 188 (424)
..-.+...|+|. +++++ ..+|.|.++|..+.... ...+ .+.+ ......++.+.+
T Consensus 51 G~EDi~~~~~G~-~~~s~~~~~pg~~~~~~~~~G~I~~~d~~~~~~~------~~~l-~~~g~~~~~~~f~PhGi~~~~d 122 (355)
T 3sre_A 51 GSEDLEILPNGL-AFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPA------VSEL-EIIGNTLDISSFNPHGISTFID 122 (355)
T ss_dssp CCCEEEECTTSE-EEEEECCC-----------CCEEEEEETTSSSCC------EEEC-EEECSSCCGGGCCEEEEEEEEC
T ss_pred CcceeEEcCCCe-EEEEeccccCCCcccCCCCCCeEEEEecCCCCCc------eEEE-EccCCCCCcCceeeeeeEEEEC
Confidence 344566777663 33333 16899999998742111 1111 2222 223567777765
Q ss_pred -CCCceEEEEe-C--CCcEEEEeCCCCCCCCcccceeeeecC-CcceeeEEeeCCCCcEEEEEe----------------
Q 014472 189 -FKEGHLLSGS-D--DAQICLWDINAAPKNKSLEAMQIFKVH-EGVVEDVAWHLRHEYLFGSVG---------------- 247 (424)
Q Consensus 189 -~~~~~l~s~~-~--dg~i~vwd~~~~~~~~~~~~~~~~~~~-~~~v~~i~~~~~~~~~~~s~~---------------- 247 (424)
++..+|+++. . +.+|.+|++..... ....+..+.+. -...+++.+.++|. ++++..
T Consensus 123 ~dg~~~L~Vvnh~~~~s~ielf~~d~~~~--~~~~~~~~~g~~~~~pND~~v~~~G~-fyvt~~~~ftd~~~~~~e~~~~ 199 (355)
T 3sre_A 123 DDNTVYLLVVNHPGSSSTVEVFKFQEEEK--SLLHLKTIRHKLLPSVNDIVAVGPEH-FYATNDHYFIDPYLKSWEMHLG 199 (355)
T ss_dssp TTCCEEEEEEECSTTCCEEEEEEEETTTT--EEEEEEEECCTTCSSEEEEEEEETTE-EEEEESCSCSSHHHHHHHHHTT
T ss_pred CCCcEEEEEEECCCCCCeEEEEEEECCCC--EEEEEeccccCCCCCCceEEEeCCCC-EEecCCcEeCCcccccchhhcc
Confidence 3443454442 2 56788888765422 22333334332 24688999999986 444543
Q ss_pred -CCCeEEEEECCCCCCCCCeeEecccCCCeeEEEecCCCCeEEEEEeCCCcEEEEECCCCCCc--ceeecCCCCCEEEEE
Q 014472 248 -DDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATGSTDKTVKLFDLRKISTA--LHTFDSHKEEVFQVG 324 (424)
Q Consensus 248 -~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~--~~~~~~~~~~v~~~~ 324 (424)
..|.|..+|.. + +..+...-...+.|+|+|+++.+.++-+..+.|..||+...+.. ...+. ..+..-.++
T Consensus 200 ~~~g~vyr~d~~--~----~~~~~~~l~~pNGia~spDg~~lYvadt~~~~I~~~~~~~~g~l~~~~~~~-~~g~PDGi~ 272 (355)
T 3sre_A 200 LAWSFVTYYSPN--D----VRVVAEGFDFANGINISPDGKYVYIAELLAHKIHVYEKHANWTLTPLRVLS-FDTLVDNIS 272 (355)
T ss_dssp CCCEEEEEECTT--C----CEEEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEE-CSSEEEEEE
T ss_pred CCccEEEEEECC--e----EEEeecCCcccCcceECCCCCEEEEEeCCCCeEEEEEECCCCcEecCEEEe-CCCCCceEE
Confidence 12455555542 2 22222234567899999999977777777889999999743321 12332 245678889
Q ss_pred EcC-CCCcEEEEEeCC
Q 014472 325 WNP-KNETILASCCLG 339 (424)
Q Consensus 325 ~sp-~~~~~l~s~~~d 339 (424)
..+ +|. +.+++..+
T Consensus 273 vD~e~G~-lwva~~~~ 287 (355)
T 3sre_A 273 VDPVTGD-LWVGCHPN 287 (355)
T ss_dssp ECTTTCC-EEEEEESC
T ss_pred EeCCCCc-EEEEecCC
Confidence 998 585 56655544
No 301
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=97.36 E-value=0.03 Score=49.86 Aligned_cols=195 Identities=9% Similarity=0.028 Sum_probs=103.3
Q ss_pred CCceeEEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCCeeeEEecCCCCceEEEEeCCCcEE
Q 014472 125 DGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDDAQIC 204 (424)
Q Consensus 125 ~~~v~~i~~~p~~~~~latg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~ 204 (424)
++.+..+.+.+++. +++++ .+|.|..- .+.. ..+. .....+...+.++.+.+++. +++++ .+|.+.
T Consensus 121 ~~~~~~i~~~~~~~-~~~~~-~~g~v~~S-~DgG-------~tW~--~~~~~~~~~~~~~~~~~~~~-~~~~g-~~G~~~ 186 (327)
T 2xbg_A 121 PGSPRLIKALGNGS-AEMIT-NVGAIYRT-KDSG-------KNWQ--ALVQEAIGVMRNLNRSPSGE-YVAVS-SRGSFY 186 (327)
T ss_dssp SSCEEEEEEEETTE-EEEEE-TTCCEEEE-SSTT-------SSEE--EEECSCCCCEEEEEECTTSC-EEEEE-TTSSEE
T ss_pred CCCeEEEEEECCCC-EEEEe-CCccEEEE-cCCC-------CCCE--EeecCCCcceEEEEEcCCCc-EEEEE-CCCcEE
Confidence 34567777766554 56655 35544321 1110 1121 11234556788999998765 45544 455544
Q ss_pred E-EeCCCCCCCCcccceeeeecCCcceeeEEeeCCCCcEEEEEeCCCeEEEEECCCCCCCCCeeEe-cccCCCeeEEEec
Q 014472 205 L-WDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSV-VAHQSEVNCLAFN 282 (424)
Q Consensus 205 v-wd~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~~s~~~dg~i~i~d~~~~~~~~~~~~~-~~~~~~v~~i~~~ 282 (424)
. +|-. + ..++.+. ......+..+.+.+++. ++ .++.+|.+++.+...+.....+..- ..+...+.++++.
T Consensus 187 ~S~d~g-G---~tW~~~~--~~~~~~~~~~~~~~~g~-~~-~~~~~G~~~~s~~D~G~tW~~~~~~~~~~~~~~~~v~~~ 258 (327)
T 2xbg_A 187 STWEPG-Q---TAWEPHN--RTTSRRLHNMGFTPDGR-LW-MIVNGGKIAFSDPDNSENWGELLSPLRRNSVGFLDLAYR 258 (327)
T ss_dssp EEECTT-C---SSCEEEE--CCSSSCEEEEEECTTSC-EE-EEETTTEEEEEETTEEEEECCCBCTTSSCCSCEEEEEES
T ss_pred EEeCCC-C---CceeECC--CCCCCccceeEECCCCC-EE-EEeCCceEEEecCCCCCeeEeccCCcccCCcceEEEEec
Confidence 3 3321 1 1222221 22456788899988875 54 4567888877643222211111110 0122458899999
Q ss_pred CCCCeEEEEEeCCCcEEEEECCCCCCcceeec---CCCCCEEEEEEcCCCCcEEEEEeCCCeEEEeeC
Q 014472 283 PFNEWILATGSTDKTVKLFDLRKISTALHTFD---SHKEEVFQVGWNPKNETILASCCLGRRLMVWDL 347 (424)
Q Consensus 283 ~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~---~~~~~v~~~~~sp~~~~~l~s~~~dg~i~iwd~ 347 (424)
+.+. +++++ .+|.| ++.... +..-..+. .....+.++.|.+++ .+++++.+|.|.-++-
T Consensus 259 ~~~~-~~~~g-~~g~i-~~S~Dg-G~tW~~~~~~~~~~~~~~~v~~~~~~--~~~~~G~~G~i~~~~~ 320 (327)
T 2xbg_A 259 TPNE-VWLAG-GAGAL-LCSQDG-GQTWQQDVDVKKVPSNFYKILFFSPD--QGFILGQKGILLRYVT 320 (327)
T ss_dssp SSSC-EEEEE-STTCE-EEESST-TSSCEECGGGTTSSSCCCEEEEEETT--EEEEECSTTEEEEECC
T ss_pred CCCE-EEEEe-CCCeE-EEeCCC-CcccEEcCccCCCCCCeEEEEEECCC--ceEEEcCCceEEEEcC
Confidence 8665 55555 46766 333332 33333333 224567889887554 3667778887776653
No 302
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=97.26 E-value=0.092 Score=46.62 Aligned_cols=237 Identities=8% Similarity=-0.044 Sum_probs=116.8
Q ss_pred CceeEEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCCeeeEEecCCCCceEEEEeCCCcEEE
Q 014472 126 GEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDDAQICL 205 (424)
Q Consensus 126 ~~v~~i~~~p~~~~~latg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~v 205 (424)
..+.+|.|.| + .++++| ..|.|+. ..+.. ..+........+...+..+.+.+++. +++ ++.+|.|..
T Consensus 80 ~~~~~i~~~~-~-~~~~~g-~~g~i~~-S~DgG-------~tW~~~~~~~~~~~~~~~i~~~~~~~-~~~-~~~~g~v~~ 146 (327)
T 2xbg_A 80 YRFNSVSFQG-N-EGWIVG-EPPIMLH-TTDGG-------QSWSQIPLDPKLPGSPRLIKALGNGS-AEM-ITNVGAIYR 146 (327)
T ss_dssp CEEEEEEEET-T-EEEEEE-ETTEEEE-ESSTT-------SSCEECCCCTTCSSCEEEEEEEETTE-EEE-EETTCCEEE
T ss_pred ccEEEEEecC-C-eEEEEE-CCCeEEE-ECCCC-------CCceECccccCCCCCeEEEEEECCCC-EEE-EeCCccEEE
Confidence 4678888886 3 355554 5665544 22210 11111111111334567777765444 444 445565422
Q ss_pred EeCCCCCCCCcccceeeeecCCcceeeEEeeCCCCcEEEEEeCCCeEEEEECCCCCCCCCeeEecccCCCeeEEEecCCC
Q 014472 206 WDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFN 285 (424)
Q Consensus 206 wd~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~~~~ 285 (424)
...+. ..+..+. ......+..+.+.+++. +++++ ..|.+..-+-..+.....+. ......+..+.+.+++
T Consensus 147 --S~DgG--~tW~~~~--~~~~~~~~~~~~~~~~~-~~~~g-~~G~~~~S~d~gG~tW~~~~--~~~~~~~~~~~~~~~g 216 (327)
T 2xbg_A 147 --TKDSG--KNWQALV--QEAIGVMRNLNRSPSGE-YVAVS-SRGSFYSTWEPGQTAWEPHN--RTTSRRLHNMGFTPDG 216 (327)
T ss_dssp --ESSTT--SSEEEEE--CSCCCCEEEEEECTTSC-EEEEE-TTSSEEEEECTTCSSCEEEE--CCSSSCEEEEEECTTS
T ss_pred --EcCCC--CCCEEee--cCCCcceEEEEEcCCCc-EEEEE-CCCcEEEEeCCCCCceeECC--CCCCCccceeEECCCC
Confidence 22211 2222221 23445788999998765 55444 45554433211122222221 2345678899999987
Q ss_pred CeEEEEEeCCCcEEEEECCCCCCcceeec----CCCCCEEEEEEcCCCCcEEEEEeCCCeEEEeeCCCCCcccCCCccCC
Q 014472 286 EWILATGSTDKTVKLFDLRKISTALHTFD----SHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPEDAED 361 (424)
Q Consensus 286 ~~~l~~g~~dg~i~iwd~~~~~~~~~~~~----~~~~~v~~~~~sp~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~ 361 (424)
. ++ .++.+|.+++.+... +.....+. .+...+..+.+.+++. +++++ .+|.|. +....+..
T Consensus 217 ~-~~-~~~~~G~~~~s~~D~-G~tW~~~~~~~~~~~~~~~~v~~~~~~~-~~~~g-~~g~i~-~S~DgG~t--------- 281 (327)
T 2xbg_A 217 R-LW-MIVNGGKIAFSDPDN-SENWGELLSPLRRNSVGFLDLAYRTPNE-VWLAG-GAGALL-CSQDGGQT--------- 281 (327)
T ss_dssp C-EE-EEETTTEEEEEETTE-EEEECCCBCTTSSCCSCEEEEEESSSSC-EEEEE-STTCEE-EESSTTSS---------
T ss_pred C-EE-EEeCCceEEEecCCC-CCeeEeccCCcccCCcceEEEEecCCCE-EEEEe-CCCeEE-EeCCCCcc---------
Confidence 6 44 455678877764221 11111111 1234688999998764 55554 466553 33332211
Q ss_pred CCCeeeEEEcCCCCCcceEEeCCCCCcEEEEEeCCCcEEEEec
Q 014472 362 GPPELLFIHGGHTSKISDFSWNPCEDWVISSVAEDNILQIWQM 404 (424)
Q Consensus 362 ~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iw~~ 404 (424)
...+.........+.++.|.+++. ++.++.+|.|.-++-
T Consensus 282 --W~~~~~~~~~~~~~~~v~~~~~~~--~~~~G~~G~i~~~~~ 320 (327)
T 2xbg_A 282 --WQQDVDVKKVPSNFYKILFFSPDQ--GFILGQKGILLRYVT 320 (327)
T ss_dssp --CEECGGGTTSSSCCCEEEEEETTE--EEEECSTTEEEEECC
T ss_pred --cEEcCccCCCCCCeEEEEEECCCc--eEEEcCCceEEEEcC
Confidence 011100011234578888875554 555677887665543
No 303
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=97.21 E-value=0.038 Score=48.37 Aligned_cols=193 Identities=9% Similarity=0.077 Sum_probs=91.4
Q ss_pred ceEEEEeCC-----CcEEEEeCCCCCCCCcccceeeeecCCcceeeEEeeCCCCcEEEEEeCC-----CeEEEEECCCCC
Q 014472 192 GHLLSGSDD-----AQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDD-----QYLLIWDLRTPS 261 (424)
Q Consensus 192 ~~l~s~~~d-----g~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~~s~~~d-----g~i~i~d~~~~~ 261 (424)
.+++.|+.+ ..+.+||+.+.... .+..+..+.........+.+ +..+++.|+.+ ..+.+||+.+..
T Consensus 64 ~l~v~GG~~~~~~~~~~~~~d~~~~~~~-~W~~~~~~p~~r~~~~~~~~---~~~lyv~GG~~~~~~~~~~~~~d~~~~~ 139 (301)
T 2vpj_A 64 RIYVIGGYDGRSRLSSVECLDYTADEDG-VWYSVAPMNVRRGLAGATTL---GDMIYVSGGFDGSRRHTSMERYDPNIDQ 139 (301)
T ss_dssp EEEEECCBCSSCBCCCEEEEETTCCTTC-CCEEECCCSSCCBSCEEEEE---TTEEEEECCBCSSCBCCEEEEEETTTTE
T ss_pred EEEEEcCCCCCccCceEEEEECCCCCCC-eeEECCCCCCCccceeEEEE---CCEEEEEcccCCCcccceEEEEcCCCCe
Confidence 366677654 46889998776410 01122211111111112222 34577777644 358899987754
Q ss_pred CCCCeeEecccCCCeeEEEecCCCCeEEEEEeCC-----CcEEEEECCCCC-CcceeecCCCCCEEEEEEcCCCCcEEEE
Q 014472 262 VSKPVQSVVAHQSEVNCLAFNPFNEWILATGSTD-----KTVKLFDLRKIS-TALHTFDSHKEEVFQVGWNPKNETILAS 335 (424)
Q Consensus 262 ~~~~~~~~~~~~~~v~~i~~~~~~~~~l~~g~~d-----g~i~iwd~~~~~-~~~~~~~~~~~~v~~~~~sp~~~~~l~s 335 (424)
- ..+..+......-.++.+ ++ .+++.|+.+ ..+.+||+.+.. ..+..+......-..+.+ ++ .+++.
T Consensus 140 W-~~~~~~p~~r~~~~~~~~--~~-~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~-~i~v~ 212 (301)
T 2vpj_A 140 W-SMLGDMQTAREGAGLVVA--SG-VIYCLGGYDGLNILNSVEKYDPHTGHWTNVTPMATKRSGAGVALL--ND-HIYVV 212 (301)
T ss_dssp E-EEEEECSSCCBSCEEEEE--TT-EEEEECCBCSSCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TT-EEEEE
T ss_pred E-EECCCCCCCcccceEEEE--CC-EEEEECCCCCCcccceEEEEeCCCCcEEeCCCCCcccccceEEEE--CC-EEEEE
Confidence 2 222222211112222223 34 477777754 468899987621 111111111111222333 33 47777
Q ss_pred EeCC-----CeEEEeeCCCCCcccCCCccCCCCCeeeEEEcCCCCCcceEEeCCCCCcEEEEEeCC-----CcEEEEecC
Q 014472 336 CCLG-----RRLMVWDLSRIDEEQTPEDAEDGPPELLFIHGGHTSKISDFSWNPCEDWVISSVAED-----NILQIWQMA 405 (424)
Q Consensus 336 ~~~d-----g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d-----~~i~iw~~~ 405 (424)
|+.+ ..+.+||+.+..-... ............+.+ ++. +++.|+.+ ..+.+||+.
T Consensus 213 GG~~~~~~~~~v~~yd~~~~~W~~~------------~~~p~~r~~~~~~~~--~~~-i~v~GG~~~~~~~~~v~~yd~~ 277 (301)
T 2vpj_A 213 GGFDGTAHLSSVEAYNIRTDSWTTV------------TSMTTPRCYVGATVL--RGR-LYAIAGYDGNSLLSSIECYDPI 277 (301)
T ss_dssp CCBCSSSBCCCEEEEETTTTEEEEE------------CCCSSCCBSCEEEEE--TTE-EEEECCBCSSSBEEEEEEEETT
T ss_pred eCCCCCcccceEEEEeCCCCcEEEC------------CCCCCcccceeEEEE--CCE-EEEEcCcCCCcccccEEEEcCC
Confidence 7654 4588899876432110 000000001111222 455 67777755 457888888
Q ss_pred CCCCC
Q 014472 406 ENIYH 410 (424)
Q Consensus 406 ~~~~~ 410 (424)
++.+.
T Consensus 278 ~~~W~ 282 (301)
T 2vpj_A 278 IDSWE 282 (301)
T ss_dssp TTEEE
T ss_pred CCeEE
Confidence 77554
No 304
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=97.14 E-value=0.13 Score=46.16 Aligned_cols=243 Identities=11% Similarity=0.040 Sum_probs=125.7
Q ss_pred cCCceeEEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEE---ecCCCCeeeEEecCC---CCceEEEE
Q 014472 124 HDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRL---RGHSTEGYGLSWSKF---KEGHLLSG 197 (424)
Q Consensus 124 h~~~v~~i~~~p~~~~~latg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~---~~h~~~v~~l~~~~~---~~~~l~s~ 197 (424)
.-.....++|.|++. ++++ ..+|.|++++... . .....+ .........|+++|+ +..+.++-
T Consensus 27 ~l~~P~~ia~~pdG~-l~V~-e~~g~I~~~d~~G---------~-~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~ 94 (354)
T 3a9g_A 27 DLEVPWSIAPLGGGR-YLVT-ERPGRLVLISPSG---------K-KLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYA 94 (354)
T ss_dssp SCSCEEEEEEEETTE-EEEE-ETTTEEEEECSSC---------E-EEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEE
T ss_pred CCCCCeEEEEcCCCe-EEEE-eCCCEEEEEeCCC---------c-eEeeccceeecCCCceeeEEeCCCCCcCCEEEEEE
Confidence 345678999999886 5554 5669999987332 1 111111 112345789999997 44333333
Q ss_pred eC---C----CcEEEEeCCCCCC-CCcccce-eeee-cCCcceeeEEeeCCCCcEEEEEeC-------------CCeEEE
Q 014472 198 SD---D----AQICLWDINAAPK-NKSLEAM-QIFK-VHEGVVEDVAWHLRHEYLFGSVGD-------------DQYLLI 254 (424)
Q Consensus 198 ~~---d----g~i~vwd~~~~~~-~~~~~~~-~~~~-~~~~~v~~i~~~~~~~~~~~s~~~-------------dg~i~i 254 (424)
+. + ..|..|+...... ....+.+ ..+. ........|+|.|++. |+++.+. .|.|.-
T Consensus 95 ~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~-Lyvt~G~~~~~~~~~d~~~~~G~I~r 173 (354)
T 3a9g_A 95 SYFAEGGHIRNRVIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGM-LYITTGDAADPRLAQDLSSLAGKILR 173 (354)
T ss_dssp EEECGGGCEEEEEEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSC-EEEECCCTTCGGGGTCTTCCSSEEEE
T ss_pred eccCCCCCcceEEEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCc-EEEEECCCCCCccccCCCCCCeEEEE
Confidence 32 3 5677777654311 0011111 1111 1112346899999985 6555432 245666
Q ss_pred EECCCCCC------CCCeeEecccCCCeeEEEecC-CCCeEEEEEeCCC---cEEEEECCC---------------CCCc
Q 014472 255 WDLRTPSV------SKPVQSVVAHQSEVNCLAFNP-FNEWILATGSTDK---TVKLFDLRK---------------ISTA 309 (424)
Q Consensus 255 ~d~~~~~~------~~~~~~~~~~~~~v~~i~~~~-~~~~~l~~g~~dg---~i~iwd~~~---------------~~~~ 309 (424)
++....-. ...+.. .++ .....++|+| .+. ++++-.... .|.+...-. ...+
T Consensus 174 i~~dG~~p~~npf~~~~i~a-~G~-rnp~Gla~d~~~g~-l~v~d~g~~~~dei~~i~~G~nyGwp~~~g~~~~~~~~~p 250 (354)
T 3a9g_A 174 VDEEGRPPADNPFPNSPIWS-YGH-RNPQGIDWHRASGV-MVATEHGPVGHDEVNIILKGGNYGWPLATGKAGRGEFVDP 250 (354)
T ss_dssp ECTTSCCCTTSSSTTCCEEE-ECC-SCCCEEEECTTTCC-EEEEECCSSSCCEEEEECTTCBCCTTTCCSCCCCTTSCCC
T ss_pred EcCCCCCCCCCCCCCCcEEE-Ecc-CCcceEEEeCCCCC-EEEEecCCCCCcEEEEecCCCcCCCCcccCCCCCCCCcCC
Confidence 66543200 001111 223 3356899999 554 454432221 243332110 0123
Q ss_pred ceeecCCCCCEEEEEEc-------CCCCcEEEEEeCCCeEEEeeCCCCCcccCCCccCCCCCeeeEEEcCCCCCcceEEe
Q 014472 310 LHTFDSHKEEVFQVGWN-------PKNETILASCCLGRRLMVWDLSRIDEEQTPEDAEDGPPELLFIHGGHTSKISDFSW 382 (424)
Q Consensus 310 ~~~~~~~~~~v~~~~~s-------p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~ 382 (424)
+..+.........++|. .++ .++++.-..+.|...++....... .....+.+-...+.++++
T Consensus 251 ~~~~~~~~~ap~G~~~y~g~~fp~~~G-~l~v~~~~~~~v~~~~~~~~g~~~----------~~~~~~~~~~~rp~~v~~ 319 (354)
T 3a9g_A 251 VIDTGSETWAPSGASFVHGDMFPGLRG-WLLIACLRGSMLAAVNFGDNMEVR----------KISTFFKNVFGRLRDVVI 319 (354)
T ss_dssp SEECTTCCCCEEEEEECCSSSCGGGTT-EEEEEETTTTEEEEEEECGGGCEE----------EEEEECTTTSCCEEEEEE
T ss_pred EeecCCCCcCCcceEEECCCCCcccCC-cEEEEEcCCCEEEEEEECCCCccc----------ceeeeccCCCCCeeEEEE
Confidence 44442224567888884 345 466666667788888876422100 011112222456899999
Q ss_pred CCCCCcEEEEEe
Q 014472 383 NPCEDWVISSVA 394 (424)
Q Consensus 383 ~~~~~~~l~s~~ 394 (424)
.|+|. ++++..
T Consensus 320 ~pDG~-lyv~~~ 330 (354)
T 3a9g_A 320 DDDGG-ILISTS 330 (354)
T ss_dssp CTTSC-EEEEEC
T ss_pred CCCCc-EEEEEe
Confidence 99998 666654
No 305
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=96.98 E-value=0.17 Score=44.93 Aligned_cols=156 Identities=10% Similarity=0.189 Sum_probs=93.3
Q ss_pred CCeEEEEeCCCCCCCCCCCCCCCCcEEEec------CC-CCeeeEEe--cCC-CCceEEEEeCCCcEEEEeCCCCCCC-C
Q 014472 147 SAEVYVFDYSKHPSKPPLDGACSPDLRLRG------HS-TEGYGLSW--SKF-KEGHLLSGSDDAQICLWDINAAPKN-K 215 (424)
Q Consensus 147 dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~------h~-~~v~~l~~--~~~-~~~~l~s~~~dg~i~vwd~~~~~~~-~ 215 (424)
+++|.+|++.... .++..+.. .. ..++.+++ +|. +..++++...+|.+..|++...... .
T Consensus 98 ~n~l~vf~iDp~~---------~~l~~i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~ 168 (355)
T 3amr_A 98 KNTIEIYAIDGKN---------GTLQSMTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYI 168 (355)
T ss_dssp CCEEEEEEECTTT---------CCEEECSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCE
T ss_pred CCeEEEEEECCCC---------CceeeccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcc
Confidence 5799999885311 11222211 11 56788888 664 3336888888999999998542211 2
Q ss_pred cccceeeeecCCcceeeEEeeCCCCcEEEEEeCCCeEEEEECCCCC--CCCCeeEec--ccCCCeeEEEe--cCCCC-eE
Q 014472 216 SLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPS--VSKPVQSVV--AHQSEVNCLAF--NPFNE-WI 288 (424)
Q Consensus 216 ~~~~~~~~~~~~~~v~~i~~~~~~~~~~~s~~~dg~i~i~d~~~~~--~~~~~~~~~--~~~~~v~~i~~--~~~~~-~~ 288 (424)
..+.++.+.. .+.+..|...+....++ .+-.+.-|..++.+... ..+.+..+. .....+..|+. .+++. ++
T Consensus 169 ~~~lVR~f~l-gsq~EgcvvDd~~g~Ly-v~eEd~GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyL 246 (355)
T 3amr_A 169 SGKKVRAFKM-NSQTEGMAADDEYGRLY-IAEEDEAIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYL 246 (355)
T ss_dssp EEEEEEEEEC-SSCEEEEEEETTTTEEE-EEETTTEEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEE
T ss_pred cceEEEEecC-CCCcceEEEcCCCCeEE-EecccceEEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCCEEE
Confidence 2233444443 45788889998777666 67777667667754322 111232221 12246788887 45555 56
Q ss_pred EEEEeCCCcEEEEECCCCCCcceee
Q 014472 289 LATGSTDKTVKLFDLRKISTALHTF 313 (424)
Q Consensus 289 l~~g~~dg~i~iwd~~~~~~~~~~~ 313 (424)
|++.-.+.++.+||.....+.+..+
T Consensus 247 ivSsQG~~s~~Vydr~~~~~~vg~f 271 (355)
T 3amr_A 247 MASSQGNSSYAIYDRQGKNKYVADF 271 (355)
T ss_dssp EEEEGGGTEEEEEESSTTCCEEEEE
T ss_pred EEEcCCCCEEEEEECCCCCcEEEEE
Confidence 6666578899999997434455544
No 306
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=96.96 E-value=0.17 Score=44.28 Aligned_cols=236 Identities=10% Similarity=0.117 Sum_probs=139.2
Q ss_pred EEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCCeeeEEecCCCCceEEEEeCCCcEEEEeCCC
Q 014472 131 ARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINA 210 (424)
Q Consensus 131 i~~~p~~~~~latg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~ 210 (424)
.-.+|..+ ++|.-. ...+.|+|++. ...+.... ....|.-=.|-.... |+-.+ +..|+-|++..
T Consensus 72 AIMnP~~~-ViALra-g~~LQiFnlet----------K~klks~~-~~e~VvfWkWis~~~--L~lVT-~taVyHWs~~~ 135 (365)
T 2xzh_A 72 AIMNPASK-VIALKA-GKTLQIFNIEM----------KSKMKAHT-MTDDVTFWKWISLNT--VALVT-DNAVYHWSMEG 135 (365)
T ss_dssp EEECSSSS-EEEEEE-TTEEEEEETTT----------TEEEEEEE-CSSCEEEEEECSSSE--EEEEE-SSEEEEEESST
T ss_pred eeeCCCcc-EEEEec-CCeEEEechHH----------hhhhccee-cCCccEEEEecCCCe--EEEEc-CCcEEEEcccC
Confidence 33477654 777755 67999999988 22222222 345676677765443 44444 35899999976
Q ss_pred CCCCCcccceeeeecC----CcceeeEEeeCCCCcEEEEEe------CCCeEEEEECCCCCCCCCeeEecccCCCeeEEE
Q 014472 211 APKNKSLEAMQIFKVH----EGVVEDVAWHLRHEYLFGSVG------DDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLA 280 (424)
Q Consensus 211 ~~~~~~~~~~~~~~~~----~~~v~~i~~~~~~~~~~~s~~------~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~ 280 (424)
.. .+.+.+..| ...|..-+.+++.+.++++|- -.|.+.+|..+... -+.+.+|...-..+.
T Consensus 136 ~s-----~P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~~----sQ~ieGhaa~F~~~~ 206 (365)
T 2xzh_A 136 ES-----QPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKV----SQPIEGHAASFAQFK 206 (365)
T ss_dssp TC-----CCEEEEECCGGGTTCEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEETTTTE----EEEECCSEEEEEEEC
T ss_pred CC-----CCceeeecchhcccceEEEEEECCCCCEEEEEeEeccCCccceeEEEEeecccc----cceeeeeeeeeEEEe
Confidence 32 234444444 345666777888887776664 24778899887643 345556644333333
Q ss_pred ec--CCCCeEEEEEeC---CCcEEEEECCCC--CCcce------eec---CCCCCEEEEEEcCCCCcEEEEEeCCCeEEE
Q 014472 281 FN--PFNEWILATGST---DKTVKLFDLRKI--STALH------TFD---SHKEEVFQVGWNPKNETILASCCLGRRLMV 344 (424)
Q Consensus 281 ~~--~~~~~~l~~g~~---dg~i~iwd~~~~--~~~~~------~~~---~~~~~v~~~~~sp~~~~~l~s~~~dg~i~i 344 (424)
.. +....+|+.+.. .+.++|-++... +.+.. .+. ....-..++..++... ++..-+.-|.|++
T Consensus 207 ~~g~~~~~~lf~fa~r~~~g~kLhIiEi~~~~~~~~~f~kk~vdi~fppea~~DFPVamqvs~kyg-viyviTK~G~ihl 285 (365)
T 2xzh_A 207 MEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHD-VVFLITKYGYIHL 285 (365)
T ss_dssp CTTCSSCEEEEEEEEEETTEEEEEEEECSSCCTTCCCCCCEEEEECCCTTCTTCCEEEEEEETTTT-EEEEEETTSEEEE
T ss_pred cCCCCCCceEEEEEEecCCCcEEEEEEcCCCCCCCCCcccccceeeCCccccCCceEEEEecccCC-EEEEEeCCcEEEE
Confidence 22 111224444333 258999998543 21111 111 1234456777777664 7888889999999
Q ss_pred eeCCCCCcccCCCccCCCCCeeeEEEcCCCCCcceEEeCCCCCcEEEEEeCCCcEEEEecCCC
Q 014472 345 WDLSRIDEEQTPEDAEDGPPELLFIHGGHTSKISDFSWNPCEDWVISSVAEDNILQIWQMAEN 407 (424)
Q Consensus 345 wd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iw~~~~~ 407 (424)
||+.++ .+++..+-....|...+-+..... +++....|.|.--.+++.
T Consensus 286 yDleTg--------------t~i~~nrIS~d~iF~ta~~~~~~G-i~~Vnr~GqVl~v~v~~~ 333 (365)
T 2xzh_A 286 YDLETG--------------TCIYMNRISGETIFVTAPHEATAG-IIGVNRKGQVLSVCVEEE 333 (365)
T ss_dssp EETTTC--------------CEEEEEECCSSCEEEEEEEGGGTE-EEEEETTCEEEEEEECTT
T ss_pred EEcccC--------------cEEEEeccCCCceEEecccCCCCc-EEEEcCCCEEEEEEECcc
Confidence 999987 445555544555655555444443 444457777766655554
No 307
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=96.94 E-value=0.067 Score=46.76 Aligned_cols=192 Identities=10% Similarity=0.062 Sum_probs=89.8
Q ss_pred ceEEEEeCC-----CcEEEEeCCCCCCCCcccceeeeecCCcceeeEEeeCCCCcEEEEEeCCC-----eEEEEECCCCC
Q 014472 192 GHLLSGSDD-----AQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQ-----YLLIWDLRTPS 261 (424)
Q Consensus 192 ~~l~s~~~d-----g~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~~s~~~dg-----~i~i~d~~~~~ 261 (424)
.+++.|+.+ ..+.+||+.+.. +..+..+.........+.+ +..+++.|+.++ .+.+||+.+..
T Consensus 63 ~lyv~GG~~~~~~~~~~~~~d~~~~~----W~~~~~~p~~r~~~~~~~~---~~~iyv~GG~~~~~~~~~~~~~d~~~~~ 135 (302)
T 2xn4_A 63 LVFAVGGFNGSLRVRTVDSYDPVKDQ----WTSVANMRDRRSTLGAAVL---NGLLYAVGGFDGSTGLSSVEAYNIKSNE 135 (302)
T ss_dssp EEEEESCBCSSSBCCCEEEEETTTTE----EEEECCCSSCCBSCEEEEE---TTEEEEEEEECSSCEEEEEEEEETTTTE
T ss_pred EEEEEeCcCCCccccceEEECCCCCc----eeeCCCCCccccceEEEEE---CCEEEEEcCCCCCccCceEEEEeCCCCe
Confidence 366667654 357888886542 1222111111111112222 345777777553 47788987654
Q ss_pred CCCCeeEecccCCCeeEEEecCCCCeEEEEEeCC-------CcEEEEECCCCC-CcceeecCCCCCEEEEEEcCCCCcEE
Q 014472 262 VSKPVQSVVAHQSEVNCLAFNPFNEWILATGSTD-------KTVKLFDLRKIS-TALHTFDSHKEEVFQVGWNPKNETIL 333 (424)
Q Consensus 262 ~~~~~~~~~~~~~~v~~i~~~~~~~~~l~~g~~d-------g~i~iwd~~~~~-~~~~~~~~~~~~v~~~~~sp~~~~~l 333 (424)
- ..+..+........++.+ +..+++.|+.+ ..+.+||+.+.. ..+..+.........+.+ ++ .++
T Consensus 136 W-~~~~~~p~~r~~~~~~~~---~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~-~iy 208 (302)
T 2xn4_A 136 W-FHVAPMNTRRSSVGVGVV---GGLLYAVGGYDVASRQCLSTVECYNATTNEWTYIAEMSTRRSGAGVGVL--NN-LLY 208 (302)
T ss_dssp E-EEECCCSSCCBSCEEEEE---TTEEEEECCEETTTTEECCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TT-EEE
T ss_pred E-eecCCCCCcccCceEEEE---CCEEEEEeCCCCCCCccccEEEEEeCCCCcEEECCCCccccccccEEEE--CC-EEE
Confidence 1 111111111111222222 33467777643 358899987521 111111111112222233 34 467
Q ss_pred EEEeCC-----CeEEEeeCCCCCcccCCCccCCCCCeeeEEEcCCCCCcceEEeCCCCCcEEEEEeCCC-----cEEEEe
Q 014472 334 ASCCLG-----RRLMVWDLSRIDEEQTPEDAEDGPPELLFIHGGHTSKISDFSWNPCEDWVISSVAEDN-----ILQIWQ 403 (424)
Q Consensus 334 ~s~~~d-----g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~-----~i~iw~ 403 (424)
+.|+.+ ..+.+||+.+..-... ............+. .++. +++.|+.++ .+.+||
T Consensus 209 v~GG~~~~~~~~~~~~yd~~~~~W~~~------------~~~~~~r~~~~~~~--~~~~-i~v~GG~~~~~~~~~v~~yd 273 (302)
T 2xn4_A 209 AVGGHDGPLVRKSVEVYDPTTNAWRQV------------ADMNMCRRNAGVCA--VNGL-LYVVGGDDGSCNLASVEYYN 273 (302)
T ss_dssp EECCBSSSSBCCCEEEEETTTTEEEEE------------CCCSSCCBSCEEEE--ETTE-EEEECCBCSSSBCCCEEEEE
T ss_pred EECCCCCCcccceEEEEeCCCCCEeeC------------CCCCCccccCeEEE--ECCE-EEEECCcCCCcccccEEEEc
Confidence 777654 3588888876432110 00000000011122 2455 777777553 489999
Q ss_pred cCCCCCCCC
Q 014472 404 MAENIYHDE 412 (424)
Q Consensus 404 ~~~~~~~~~ 412 (424)
+.++.+...
T Consensus 274 ~~~~~W~~~ 282 (302)
T 2xn4_A 274 PTTDKWTVV 282 (302)
T ss_dssp TTTTEEEEC
T ss_pred CCCCeEEEC
Confidence 998876543
No 308
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=96.93 E-value=0.07 Score=47.98 Aligned_cols=109 Identities=13% Similarity=0.147 Sum_probs=62.6
Q ss_pred CCCeeeEEecCCCCceEEEEeCCCcEEEEeCCCCCCCCcccceeeeecCCcceeeEEeeCC---CCcEEEEEeCC-----
Q 014472 178 STEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLR---HEYLFGSVGDD----- 249 (424)
Q Consensus 178 ~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~---~~~~~~s~~~d----- 249 (424)
-....+++|.|++. |+++...|.|.+++ .+.. ..+..+............|+++|+ +..++++-...
T Consensus 30 l~~P~~ia~~pdG~--l~V~e~~g~I~~i~--~g~~-~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~ 104 (352)
T 2ism_A 30 LEVPWALAFLPDGG--MLIAERPGRIRLFR--EGRL-STYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGLR 104 (352)
T ss_dssp CSCEEEEEECTTSC--EEEEETTTEEEEEE--TTEE-EEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSSE
T ss_pred CCCceEEEEcCCCe--EEEEeCCCeEEEEE--CCCc-cEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCCCc
Confidence 34567999999886 55556779999998 2211 111001111122456889999998 56677665543
Q ss_pred CeEEEEECCCCCC--CCCe-eEec---ccCCCeeEEEecCCCCeEEEEE
Q 014472 250 QYLLIWDLRTPSV--SKPV-QSVV---AHQSEVNCLAFNPFNEWILATG 292 (424)
Q Consensus 250 g~i~i~d~~~~~~--~~~~-~~~~---~~~~~v~~i~~~~~~~~~l~~g 292 (424)
..|..++...... .+.+ ..+. ........|+|.|+|. +.++.
T Consensus 105 ~~v~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~-Lyv~~ 152 (352)
T 2ism_A 105 NQVVRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGM-LYVTT 152 (352)
T ss_dssp EEEEEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSC-EEEEC
T ss_pred cEEEEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCC-EEEEE
Confidence 6788888764321 0011 1122 1112346899999996 45543
No 309
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=96.83 E-value=0.26 Score=44.29 Aligned_cols=256 Identities=11% Similarity=0.079 Sum_probs=124.8
Q ss_pred CceeEEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCCeeeEEecCC---CCceEEEEeC---
Q 014472 126 GEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKF---KEGHLLSGSD--- 199 (424)
Q Consensus 126 ~~v~~i~~~p~~~~~latg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~---~~~~l~s~~~--- 199 (424)
.....|+|.|++..+++ +...|.|++++........- ...+ ............|+++|+ +..+.++-+.
T Consensus 18 ~~P~~i~~~pdG~~l~V-~e~~G~i~~~~~~g~~~~~~---~~~~-~v~~~g~~g~~gia~~pdf~~~g~lYv~~~~~~~ 92 (353)
T 2g8s_A 18 DHPWALAFLPDNHGMLI-TLRGGELRHWQAGKGLSAPL---SGVP-DVWAHGQGGLLDVVLAPDFAQSRRIWLSYSEVGD 92 (353)
T ss_dssp SSEEEEEECSTTCCEEE-EETTTEEEEEETTTEECCCC---BSCC-CCCCSTTCSEEEEEECTTHHHHCEEEEEEEEECS
T ss_pred CCcEEEEEcCCCCEEEE-EeCCceEEEEeCCCceeeEe---cCCc-ccccCCCCCceeEEECCCCCCCCEEEEEEeCCCC
Confidence 45678999999863444 45679999998543110000 0000 001112345689999995 4423333222
Q ss_pred ----CCcEEEEeCCCCCC-CCcccce-eeee---cCCcceeeEEeeCCCCcEEEEEeC-------------CCeEEEEEC
Q 014472 200 ----DAQICLWDINAAPK-NKSLEAM-QIFK---VHEGVVEDVAWHLRHEYLFGSVGD-------------DQYLLIWDL 257 (424)
Q Consensus 200 ----dg~i~vwd~~~~~~-~~~~~~~-~~~~---~~~~~v~~i~~~~~~~~~~~s~~~-------------dg~i~i~d~ 257 (424)
...|..|++..... ....+.+ ..+. ........|+|.|++ .|+++.+. .|.|.-++.
T Consensus 93 ~g~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~pdG-~Lyv~~Gd~~~~~~~q~~~~~~g~I~ri~~ 171 (353)
T 2g8s_A 93 DGKAGTAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDGKG-YLFIALGENNQRPTAQDLDKLQGKLVRLTD 171 (353)
T ss_dssp SSCEEEEEEEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECSSS-EEEEEECCTTCGGGGGCTTSCTTEEEEEET
T ss_pred CCCceeEEEEEEECCCCCCCCceEEEEEECCCCCCCcccCccEEECCCC-cEEEEECCCCCCCccCCCCCCCeEEEEECC
Confidence 23566666643211 0011111 1111 111124679999998 46655543 246777776
Q ss_pred CCCCC-----------CCCeeEecccCCCeeEEEecCCCCeEEEEEe-CCCcEEEEECCCC-------------------
Q 014472 258 RTPSV-----------SKPVQSVVAHQSEVNCLAFNPFNEWILATGS-TDKTVKLFDLRKI------------------- 306 (424)
Q Consensus 258 ~~~~~-----------~~~~~~~~~~~~~v~~i~~~~~~~~~l~~g~-~dg~i~iwd~~~~------------------- 306 (424)
...-. ...+.. .++ .....++|+|....++++-. .++.=.|.-+...
T Consensus 172 dG~~p~~npf~~~~~~~~~i~a-~G~-rnp~gl~~d~~~g~l~~~d~g~~~~dei~~i~~G~nyGwp~~~~~~~~~~~~~ 249 (353)
T 2g8s_A 172 QGEIPDDNPFIKESGVRAEIWS-YGI-RNPQGMAMNPWSNALWLNEHGPRGGDEINIPQKGKNYGWPLATWGINYSGFKI 249 (353)
T ss_dssp TSCCCTTCTTTTSTTSCTTEEE-ECC-SEEEEEEEETTTTEEEEEEECSBSCEEEECCCTTCBCCTTTBCSSBCTTSSCC
T ss_pred CCCCCCCCCCcCCCCCCccEEE-EcC-cCccceEEECCCCCEEEEecCCCCCcEEeEeccCCcCCCCCccCCCCCCCCcc
Confidence 53200 011111 122 34678999994333444322 1211122211110
Q ss_pred -----------CCcceeecCCCCCEEEEEEcC-------CCCcEEEEEeCCCeEEEeeCCCCCcccCCCccCCCCCeeeE
Q 014472 307 -----------STALHTFDSHKEEVFQVGWNP-------KNETILASCCLGRRLMVWDLSRIDEEQTPEDAEDGPPELLF 368 (424)
Q Consensus 307 -----------~~~~~~~~~~~~~v~~~~~sp-------~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~ 368 (424)
..++..+.. ......+.|.. ++ .++++.-..+.|...++...... ....
T Consensus 250 ~~~~~~~~~~~~~P~~~~~~-~~ap~G~~~y~g~~fp~~~g-~l~v~~~~~~~v~~~~~~~~~~~-----------~~~~ 316 (353)
T 2g8s_A 250 PEAKGEIVAGTEQPVFYWKD-SPAVSGMAFYNSDKFPQWQQ-KLFIGALKDKDVIVMSVNGDKVT-----------EDGR 316 (353)
T ss_dssp TTCCBSSCTTSCCCSEEESS-CCCEEEEEEECCSSSGGGTT-EEEEEETTTTEEEEEEEETTEEE-----------EEEE
T ss_pred CcccCCCCCCccCCeEEeCC-CcCcceeEEECCccCcccCC-cEEEEEccCCEEEEEEeCCCeEe-----------eeEE
Confidence 112222332 34677788864 34 46666666777777777532100 0011
Q ss_pred EEcCCCCCcceEEeCCCCCcEEEEEe-CCCcEEEEecC
Q 014472 369 IHGGHTSKISDFSWNPCEDWVISSVA-EDNILQIWQMA 405 (424)
Q Consensus 369 ~~~~h~~~v~~~~~~~~~~~~l~s~~-~d~~i~iw~~~ 405 (424)
.+.+....+.++++.|+|. ++++.. .+| +||++.
T Consensus 317 ~~~~~~~rp~~v~~~pdG~-lyv~td~~~g--~I~ri~ 351 (353)
T 2g8s_A 317 ILTDRGQRIRDVRTGPDGY-LYVLTDESSG--ELLKVS 351 (353)
T ss_dssp ESGGGCCCEEEEEECTTSC-EEEEECSTTE--EEEEEE
T ss_pred cccCCCCceeEEEECCCCc-EEEEEeCCCC--EEEEEe
Confidence 1122234689999999999 555433 334 556553
No 310
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=96.81 E-value=0.075 Score=46.58 Aligned_cols=233 Identities=11% Similarity=0.040 Sum_probs=107.2
Q ss_pred CcEEEEEecC--CeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCCeeeEEecCCCCceEEEEeCC----CcEEEEeCCCC
Q 014472 138 PFLIATKTVS--AEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDD----AQICLWDINAA 211 (424)
Q Consensus 138 ~~~latg~~d--g~v~iwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~d----g~i~vwd~~~~ 211 (424)
..+++.|+.+ ..+.+||... ..+.....+......-..+.+ +..+++.|+.+ ..+.+||+.+.
T Consensus 12 ~~l~~~GG~~~~~~~~~~d~~~--------~~W~~~~~~p~~r~~~~~~~~---~~~lyv~GG~~~~~~~~~~~~d~~~~ 80 (306)
T 3ii7_A 12 DYRIALFGGSQPQSCRYFNPKD--------YSWTDIRCPFEKRRDAACVFW---DNVVYILGGSQLFPIKRMDCYNVVKD 80 (306)
T ss_dssp CEEEEEECCSSTTSEEEEETTT--------TEEEECCCCSCCCBSCEEEEE---TTEEEEECCBSSSBCCEEEEEETTTT
T ss_pred ceEEEEeCCCCCceEEEecCCC--------CCEecCCCCCcccceeEEEEE---CCEEEEEeCCCCCCcceEEEEeCCCC
Confidence 3466677653 5788888776 222211111111111112222 33366677654 56888888764
Q ss_pred CCCCcccceeeeecCCcceeeEEeeCCCCcEEEEEeCC------CeEEEEECCCCCCCCCeeEecccCCCeeEEEecCCC
Q 014472 212 PKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDD------QYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFN 285 (424)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~~s~~~d------g~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~~~~ 285 (424)
. +..+..+.........+.+ +..+++.|+.+ ..+.+||+.+..- ..+..+......-.++.+ ++
T Consensus 81 ~----W~~~~~~p~~r~~~~~~~~---~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W-~~~~~~p~~r~~~~~~~~--~~ 150 (306)
T 3ii7_A 81 S----WYSKLGPPTPRDSLAACAA---EGKIYTSGGSEVGNSALYLFECYDTRTESW-HTKPSMLTQRCSHGMVEA--NG 150 (306)
T ss_dssp E----EEEEECCSSCCBSCEEEEE---TTEEEEECCBBTTBSCCCCEEEEETTTTEE-EEECCCSSCCBSCEEEEE--TT
T ss_pred e----EEECCCCCccccceeEEEE---CCEEEEECCCCCCCcEeeeEEEEeCCCCce-EeCCCCcCCcceeEEEEE--CC
Confidence 2 1222211111111112222 34577777755 4588999887541 111111111111222222 23
Q ss_pred CeEEEEEeC---------CCcEEEEECCCCC-CcceeecCCCCCEEEEEEcCCCCcEEEEEeCC-----CeEEEeeCCCC
Q 014472 286 EWILATGST---------DKTVKLFDLRKIS-TALHTFDSHKEEVFQVGWNPKNETILASCCLG-----RRLMVWDLSRI 350 (424)
Q Consensus 286 ~~~l~~g~~---------dg~i~iwd~~~~~-~~~~~~~~~~~~v~~~~~sp~~~~~l~s~~~d-----g~i~iwd~~~~ 350 (424)
.+++.|+. -..+.+||+.+.. ..+..+......-..+.+ ++ .+++.|+.+ ..+.+||+.+.
T Consensus 151 -~iyv~GG~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~-~i~v~GG~~~~~~~~~~~~yd~~~~ 226 (306)
T 3ii7_A 151 -LIYVCGGSLGNNVSGRVLNSCEVYDPATETWTELCPMIEARKNHGLVFV--KD-KIFAVGGQNGLGGLDNVEYYDIKLN 226 (306)
T ss_dssp -EEEEECCEESCTTTCEECCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TT-EEEEECCEETTEEBCCEEEEETTTT
T ss_pred -EEEEECCCCCCCCcccccceEEEeCCCCCeEEECCCccchhhcceEEEE--CC-EEEEEeCCCCCCCCceEEEeeCCCC
Confidence 46777764 3458899987621 111111111111122222 34 466666643 35788888764
Q ss_pred CcccCCCccCCCCCeeeEEEcCCCCCcceEEeCCCCCcEEEEEeCC-----CcEEEEecCCCCCC
Q 014472 351 DEEQTPEDAEDGPPELLFIHGGHTSKISDFSWNPCEDWVISSVAED-----NILQIWQMAENIYH 410 (424)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d-----~~i~iw~~~~~~~~ 410 (424)
.-.... ...........+.+ ++. +++.|+.+ +.+.+||+.++.+.
T Consensus 227 ~W~~~~------------~~p~~r~~~~~~~~--~~~-i~v~GG~~~~~~~~~~~~yd~~~~~W~ 276 (306)
T 3ii7_A 227 EWKMVS------------PMPWKGVTVKCAAV--GSI-VYVLAGFQGVGRLGHILEYNTETDKWV 276 (306)
T ss_dssp EEEECC------------CCSCCBSCCEEEEE--TTE-EEEEECBCSSSBCCEEEEEETTTTEEE
T ss_pred cEEECC------------CCCCCccceeEEEE--CCE-EEEEeCcCCCeeeeeEEEEcCCCCeEE
Confidence 321110 00000111122222 455 77888744 56888998887554
No 311
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=96.75 E-value=0.32 Score=44.30 Aligned_cols=153 Identities=11% Similarity=0.121 Sum_probs=92.1
Q ss_pred CCCCcEEEEEeCCCeEEEEECCCCCCCCCeeEeccc----CCCeeEEEecCCCCeEEEEEeCCCcEEEEECCCCCCc---
Q 014472 237 LRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAH----QSEVNCLAFNPFNEWILATGSTDKTVKLFDLRKISTA--- 309 (424)
Q Consensus 237 ~~~~~~~~s~~~dg~i~i~d~~~~~~~~~~~~~~~~----~~~v~~i~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~--- 309 (424)
.++..++++ .++.||..++..... .+.+... -..|..+..+|+|. +||..+ +..|.|..+......
T Consensus 30 ~n~t~i~~a--~~n~iR~~~i~~~~~---Yk~L~~~~~i~f~~i~qlvlSpsG~-lLAl~g-~~~V~Vv~LP~~~~~~~~ 102 (452)
T 3pbp_A 30 QNGTRIVFI--QDNIIRWYNVLTDSL---YHSLNFSRHLVLDDTFHVISSTSGD-LLCLFN-DNEIFVMEVPWGYSNVED 102 (452)
T ss_dssp TTTTEEEEE--ETTEEEEEETTTCSS---CEEEECTTTCCCCTTCEEEECTTSS-EEEEEC-SSEEEEEECCTTCSCCCC
T ss_pred cCCCEEEEE--ECCEEEEEECCCCCc---ceEEecCcccccCceeEEEECCCCC-EEEEec-CCeEEEEEecCccccCcc
Confidence 445545433 468888888875432 3333322 23688899999998 566654 568999988732211
Q ss_pred --------ceeecC------CCCCEEEEEEcCCCCc--EEEEEeCCCeEEEeeCCCCCcccCCCccCCCCCeeeEEEcCC
Q 014472 310 --------LHTFDS------HKEEVFQVGWNPKNET--ILASCCLGRRLMVWDLSRIDEEQTPEDAEDGPPELLFIHGGH 373 (424)
Q Consensus 310 --------~~~~~~------~~~~v~~~~~sp~~~~--~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h 373 (424)
.+.+.. ...+|..+.|+|-+.. .|++-..|+.|++||+......-. ... .. ...+....+
T Consensus 103 ~~~~~~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~s~~~P~--~L~-k~-~~~fg~d~~ 178 (452)
T 3pbp_A 103 VSIQDAFQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILNSQEKPI--VLN-KP-NNSFGLDAR 178 (452)
T ss_dssp HHHHHTTEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTCTTSCCE--EES-CC-CSEEESCSS
T ss_pred cccccccceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEEecCCEEEEEEcccCCCCCc--chh-cc-ccccCCCcc
Confidence 112221 3578999999996533 788999999999999987221100 000 00 012233334
Q ss_pred CCCcceEEeCCCCCcEEEEE--eCCCcEEE
Q 014472 374 TSKISDFSWNPCEDWVISSV--AEDNILQI 401 (424)
Q Consensus 374 ~~~v~~~~~~~~~~~~l~s~--~~d~~i~i 401 (424)
...|.+++|..++- .|... ..+|-|+-
T Consensus 179 ~~ev~S~~Fg~~~l-TLYvl~~t~~GDIYA 207 (452)
T 3pbp_A 179 VNDITDLEFSKDGL-TLYCLNTTEGGDIFA 207 (452)
T ss_dssp CCCEEEEEECTTSS-CEEEEECTTSCEEEE
T ss_pred cceEEEEEEcCCCc-EEEEEecCCCCCEEE
Confidence 46788999998664 34443 36676653
No 312
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=96.70 E-value=0.78 Score=48.14 Aligned_cols=148 Identities=11% Similarity=0.145 Sum_probs=88.8
Q ss_pred ecCCCCceEEEEe----------CCCcEEEEeCCCCCCCCcccceeeeecCCcceeeEEeeCCCCcEEEEEeCCCeEEEE
Q 014472 186 WSKFKEGHLLSGS----------DDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIW 255 (424)
Q Consensus 186 ~~~~~~~~l~s~~----------~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~~s~~~dg~i~i~ 255 (424)
|..+...+|++|. ..|.|.++++.. ..++.+.... ..++|++++-- +.+++|+ ...+|++|
T Consensus 839 ~~~~~~~~lvVGTa~~~~~e~~~~~Gri~vf~v~~----~kL~lv~~~~-v~g~v~al~~~--~g~Lla~--ig~~l~vy 909 (1158)
T 3ei3_A 839 LGKDPNTYFIVGTAMVYPEEAEPKQGRIVVFQYSD----GKLQTVAEKE-VKGAVYSMVEF--NGKLLAS--INSTVRLY 909 (1158)
T ss_dssp CTTCCCCEEEEEEEECCTTCSSCCCEEEEEEEEET----TEEEEEEEEE-ESSCEEEEEEE--TTEEEEE--ETTEEEEE
T ss_pred EccCCCEEEEEEeeecCCCCCCCCceEEEEEEEEC----CEEEEEEEEE-cCCcCEEEeee--CCEEEEE--cCCEEEEE
Confidence 4333345788775 357899999862 2333333322 46788887744 2356543 45789999
Q ss_pred ECCCCCCCCCee-EecccCCCeeEEEecCCCCeEEEEEeCCCcEEEEECCCCCCcceee--cCCCCCEEEEEEcCCCCcE
Q 014472 256 DLRTPSVSKPVQ-SVVAHQSEVNCLAFNPFNEWILATGSTDKTVKLFDLRKISTALHTF--DSHKEEVFQVGWNPKNETI 332 (424)
Q Consensus 256 d~~~~~~~~~~~-~~~~~~~~v~~i~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~--~~~~~~v~~~~~sp~~~~~ 332 (424)
++...+. +. ....+. .|..+.....++ +++.|..-..|.++..+.....+..+ ..+...++++.+-.++ .
T Consensus 910 ~l~~~~~---L~~~~~~~~-~i~~~~l~~~~~-~I~vgD~~~Sv~~~~y~~~~~~L~~~a~D~~~~~vta~~~ld~~--t 982 (1158)
T 3ei3_A 910 EWTTEKE---LRTECNHYN-NIMALYLKTKGD-FILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEILDDD--N 982 (1158)
T ss_dssp EECTTSC---EEEEEEECC-CSCEEEEEEETT-EEEEEESSBCEEEEEEETTTTEEEEEEECCSCBCEEEEEEEETT--E
T ss_pred ECCCCce---EEEEeeccc-cEEEEEEeccCC-EEEEEEhhheEEEEEEEcCCCeEEEEEeecccccEEEEEEEccC--c
Confidence 9976543 22 111121 233222222355 58888887778777655422222222 3456788999987655 4
Q ss_pred EEEEeCCCeEEEeeCCC
Q 014472 333 LASCCLGRRLMVWDLSR 349 (424)
Q Consensus 333 l~s~~~dg~i~iwd~~~ 349 (424)
++.+..+|.+.+.....
T Consensus 983 ~l~aD~~gNl~vl~~~~ 999 (1158)
T 3ei3_A 983 FLGAENAFNLFVCQKDS 999 (1158)
T ss_dssp EEEEETTSEEEEEEECT
T ss_pred EEEEcCCCcEEEEecCC
Confidence 67789999999988765
No 313
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=96.63 E-value=0.28 Score=44.07 Aligned_cols=215 Identities=9% Similarity=0.050 Sum_probs=107.1
Q ss_pred CCeeeEEecCCCCceEEEEeCCCcEEEEeCCCCCCCCcccceeeeecCCcceeeEEeeCC---CCcEEEEEeC---C---
Q 014472 179 TEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLR---HEYLFGSVGD---D--- 249 (424)
Q Consensus 179 ~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~---~~~~~~s~~~---d--- 249 (424)
....+++|.|++. |+++..+|.|.+++. .+. ..+..+............|+++|+ +..++++-.. +
T Consensus 29 ~~P~~ia~~pdG~--l~V~e~~g~I~~~d~-~G~--~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~ 103 (354)
T 3a9g_A 29 EVPWSIAPLGGGR--YLVTERPGRLVLISP-SGK--KLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGGHI 103 (354)
T ss_dssp SCEEEEEEEETTE--EEEEETTTEEEEECS-SCE--EEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGGCE
T ss_pred CCCeEEEEcCCCe--EEEEeCCCEEEEEeC-CCc--eEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCCCc
Confidence 4568999999875 666677799999973 221 111111111122356889999997 5567665542 3
Q ss_pred -CeEEEEECCCCCC-C---CCe-eEecc-cCCCeeEEEecCCCCeEEEEEeC-------------CCcEEEEECCCCCC-
Q 014472 250 -QYLLIWDLRTPSV-S---KPV-QSVVA-HQSEVNCLAFNPFNEWILATGST-------------DKTVKLFDLRKIST- 308 (424)
Q Consensus 250 -g~i~i~d~~~~~~-~---~~~-~~~~~-~~~~v~~i~~~~~~~~~l~~g~~-------------dg~i~iwd~~~~~~- 308 (424)
..|..|+...... . +.+ ..+.. .......|+|.|+|. ++++.+. .|.|.-++... ..
T Consensus 104 ~~~v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~-Lyvt~G~~~~~~~~~d~~~~~G~I~ri~~dG-~~p 181 (354)
T 3a9g_A 104 RNRVIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGM-LYITTGDAADPRLAQDLSSLAGKILRVDEEG-RPP 181 (354)
T ss_dssp EEEEEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSC-EEEECCCTTCGGGGTCTTCCSSEEEEECTTS-CCC
T ss_pred ceEEEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCc-EEEEECCCCCCccccCCCCCCeEEEEEcCCC-CCC
Confidence 5677777654310 0 011 11211 112356799999997 4554332 24555555432 10
Q ss_pred ------cceee-cCCCCCEEEEEEcC-CCCcEEEEEeCCC---eEEEeeCCCCCccc---CC-CccCCCCCeeeEEE-cC
Q 014472 309 ------ALHTF-DSHKEEVFQVGWNP-KNETILASCCLGR---RLMVWDLSRIDEEQ---TP-EDAEDGPPELLFIH-GG 372 (424)
Q Consensus 309 ------~~~~~-~~~~~~v~~~~~sp-~~~~~l~s~~~dg---~i~iwd~~~~~~~~---~~-~~~~~~~~~~~~~~-~~ 372 (424)
....+ .++ .....++|+| .+. ++++-...+ .|.+. ..+..-- .. .....+....+..+ ..
T Consensus 182 ~~npf~~~~i~a~G~-rnp~Gla~d~~~g~-l~v~d~g~~~~dei~~i--~~G~nyGwp~~~g~~~~~~~~~p~~~~~~~ 257 (354)
T 3a9g_A 182 ADNPFPNSPIWSYGH-RNPQGIDWHRASGV-MVATEHGPVGHDEVNII--LKGGNYGWPLATGKAGRGEFVDPVIDTGSE 257 (354)
T ss_dssp TTSSSTTCCEEEECC-SCCCEEEECTTTCC-EEEEECCSSSCCEEEEE--CTTCBCCTTTCCSCCCCTTSCCCSEECTTC
T ss_pred CCCCCCCCcEEEEcc-CCcceEEEeCCCCC-EEEEecCCCCCcEEEEe--cCCCcCCCCcccCCCCCCCCcCCEeecCCC
Confidence 01111 122 2356899999 554 554433221 23332 2221100 00 00000001222333 22
Q ss_pred CCCCcceEEeC-------CCCCcEEEEEeCCCcEEEEecCC
Q 014472 373 HTSKISDFSWN-------PCEDWVISSVAEDNILQIWQMAE 406 (424)
Q Consensus 373 h~~~v~~~~~~-------~~~~~~l~s~~~d~~i~iw~~~~ 406 (424)
| .....++|. .++. ++++.-..+.|...++..
T Consensus 258 ~-~ap~G~~~y~g~~fp~~~G~-l~v~~~~~~~v~~~~~~~ 296 (354)
T 3a9g_A 258 T-WAPSGASFVHGDMFPGLRGW-LLIACLRGSMLAAVNFGD 296 (354)
T ss_dssp C-CCEEEEEECCSSSCGGGTTE-EEEEETTTTEEEEEEECG
T ss_pred C-cCCcceEEECCCCCcccCCc-EEEEEcCCCEEEEEEECC
Confidence 3 346777873 4565 566666667787777764
No 314
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=96.59 E-value=0.2 Score=44.07 Aligned_cols=105 Identities=9% Similarity=0.126 Sum_probs=51.7
Q ss_pred CCcEEEEEeCC--------CeEEEEECCCCCCCCCeeEecccCCCeeEEEecCCCCeEEEEEeC-C-----CcEEEEECC
Q 014472 239 HEYLFGSVGDD--------QYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATGST-D-----KTVKLFDLR 304 (424)
Q Consensus 239 ~~~~~~s~~~d--------g~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~l~~g~~-d-----g~i~iwd~~ 304 (424)
+..+++.|+.+ ..+.+||+.+.+- ..+..+......-.++.+ +..+++.|+. + ..+.+||+.
T Consensus 98 ~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W-~~~~~~p~~r~~~~~~~~---~~~iyv~GG~~~~~~~~~~~~~yd~~ 173 (315)
T 4asc_A 98 LNSIYVVGGREIKDGERCLDSVMCYDRLSFKW-GESDPLPYVVYGHTVLSH---MDLVYVIGGKGSDRKCLNKMCVYDPK 173 (315)
T ss_dssp TTEEEEECCEESSTTCCBCCCEEEEETTTTEE-EECCCCSSCCBSCEEEEE---TTEEEEECCBCTTSCBCCCEEEEETT
T ss_pred CCEEEEEeCCcCCCCCcccceEEEECCCCCcE-eECCCCCCcccceeEEEE---CCEEEEEeCCCCCCcccceEEEEeCC
Confidence 34577777732 4588999887541 111111111111222222 3347777776 2 468899987
Q ss_pred CCC-CcceeecCCCCCEEEEEEcCCCCcEEEEEeCCC-----eEEEeeCCCC
Q 014472 305 KIS-TALHTFDSHKEEVFQVGWNPKNETILASCCLGR-----RLMVWDLSRI 350 (424)
Q Consensus 305 ~~~-~~~~~~~~~~~~v~~~~~sp~~~~~l~s~~~dg-----~i~iwd~~~~ 350 (424)
+.. ..+..+......-..+.+ ++ .+++.|+.++ .+.+||+.+.
T Consensus 174 ~~~W~~~~~~p~~r~~~~~~~~--~~-~iyv~GG~~~~~~~~~~~~yd~~~~ 222 (315)
T 4asc_A 174 KFEWKELAPMQTARSLFGATVH--DG-RIIVAAGVTDTGLTSSAEVYSITDN 222 (315)
T ss_dssp TTEEEECCCCSSCCBSCEEEEE--TT-EEEEEEEECSSSEEEEEEEEETTTT
T ss_pred CCeEEECCCCCCchhceEEEEE--CC-EEEEEeccCCCCccceEEEEECCCC
Confidence 621 111111111111222223 34 4677776544 4778888764
No 315
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=96.47 E-value=0.5 Score=43.13 Aligned_cols=236 Identities=10% Similarity=0.116 Sum_probs=143.3
Q ss_pred EEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCCeeeEEecCCCCceEEEEeCCCcEEEEeCCC
Q 014472 131 ARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINA 210 (424)
Q Consensus 131 i~~~p~~~~~latg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~ 210 (424)
.-.+|..+ ++|.-. ..++.|||+.. ........ ....|.-=.|-... .|+-.+ +..|+-|++..
T Consensus 71 AIMnP~~~-iiALra-g~~lQiFnle~----------K~klks~~-~~e~VvfWkWis~~--~l~lVT-~taVyHWsi~~ 134 (494)
T 1bpo_A 71 AIMNPASK-VIALKA-GKTLQIFNIEM----------KSKMKAHT-MTDDVTFWKWISLN--TVALVT-DNAVYHWSMEG 134 (494)
T ss_dssp EEECSSSS-CEEEEE-TTEEEEEETTT----------TEEEEEEE-CSSCCCEEEEEETT--EEEEEC-SSEEEEEESSS
T ss_pred eeeCCCCc-EEEEec-CCeEEEEchHH----------hhhhccee-cCCCceEEEecCCC--eEEEEc-CCeeEEecccC
Confidence 44566554 677654 67999999987 22222222 23566666776543 354444 36899999975
Q ss_pred CCCCCcccceeeeecC----CcceeeEEeeCCCCcEEEEEe------CCCeEEEEECCCCCCCCCeeEecccCCCeeEEE
Q 014472 211 APKNKSLEAMQIFKVH----EGVVEDVAWHLRHEYLFGSVG------DDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLA 280 (424)
Q Consensus 211 ~~~~~~~~~~~~~~~~----~~~v~~i~~~~~~~~~~~s~~------~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~ 280 (424)
.. .+.+.+..| ...|..-..+++.+.++++|- -.|.+.+|...... -+.+.+|-..-..+.
T Consensus 135 ~s-----~P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~~----sQ~ieGhaa~F~~~~ 205 (494)
T 1bpo_A 135 ES-----QPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKV----SQPIEGHAASFAQFK 205 (494)
T ss_dssp SC-----CCEEEEECCGGGTTCEEEEEEECTTSSEEEEEEEEEETTEEEEEEEEEESTTCC----EEEECCSEEEEEEEE
T ss_pred CC-----CchhheecchhcccceEEEEEECCCCCeEEEEeecccCCcccceEEEeeccccc----cchheeeeeeeEEEe
Confidence 32 244444444 346667777888888776664 34778899987644 455667755444444
Q ss_pred ecCC--CCeEEEEEeCC---CcEEEEECCCC--CCcc------eeec---CCCCCEEEEEEcCCCCcEEEEEeCCCeEEE
Q 014472 281 FNPF--NEWILATGSTD---KTVKLFDLRKI--STAL------HTFD---SHKEEVFQVGWNPKNETILASCCLGRRLMV 344 (424)
Q Consensus 281 ~~~~--~~~~l~~g~~d---g~i~iwd~~~~--~~~~------~~~~---~~~~~v~~~~~sp~~~~~l~s~~~dg~i~i 344 (424)
.... ...+|+.+... +.++|-++... +.+. ..+. .-..-..++..++... ++..-+.-|.|.+
T Consensus 206 ~~g~~~~~~lf~fa~r~~~g~kLhi~Ei~~~~~~~~~f~kk~vdv~fppe~~~DFPvamqvs~kyg-viyviTK~G~i~l 284 (494)
T 1bpo_A 206 MEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHD-VVFLITKYGYIHL 284 (494)
T ss_dssp CTTCSSEEEEEEEEECSTTCCEEEEEECSCCCTTCCCCCCEEEECCCCTTSTTCCEEEEEEETTTT-EEEEEETTSEEEE
T ss_pred cCCCCCCceEEEEEEecCCCcEEEEEEcCCCccCCCCccceeeeeeCCcccccCceeEEEecccCC-EEEEEecCceEEE
Confidence 4321 12355555543 78999998653 1111 1111 1234456788888775 7888889999999
Q ss_pred eeCCCCCcccCCCccCCCCCeeeEEEcCCCCCcceEEeCCCCCcEEEEEeCCCcEEEEecCCC
Q 014472 345 WDLSRIDEEQTPEDAEDGPPELLFIHGGHTSKISDFSWNPCEDWVISSVAEDNILQIWQMAEN 407 (424)
Q Consensus 345 wd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iw~~~~~ 407 (424)
||+.++ .+++..+-....|.-.+-+..... +++....|.|.--.+++.
T Consensus 285 yDleTg--------------t~i~~nrIs~~~iF~t~~~~~~~G-i~~Vnr~GqVl~v~v~e~ 332 (494)
T 1bpo_A 285 YDLETG--------------TCIYMNRISGETIFVTAPHEATAG-IIGVNRKGQVLSVCVEEE 332 (494)
T ss_dssp EETTTC--------------CEEEEEECCSSCEEEEEEETTTTE-EEEEETTCEEEEEEECTT
T ss_pred Eecccc--------------eeeeeecccCCceEEecccCCCCc-EEEEccCceEEEEEEccc
Confidence 999987 445555544555655555555444 444557777766666554
No 316
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=96.43 E-value=0.25 Score=40.55 Aligned_cols=136 Identities=10% Similarity=0.040 Sum_probs=75.0
Q ss_pred ceEEEEeCCCcEEEEeCCCCCCCCcc-cceeeeecC--CcceeeEEeeCCCCcEEEEEeCCCeEEEEECCCCCCCCCeeE
Q 014472 192 GHLLSGSDDAQICLWDINAAPKNKSL-EAMQIFKVH--EGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQS 268 (424)
Q Consensus 192 ~~l~s~~~dg~i~vwd~~~~~~~~~~-~~~~~~~~~--~~~v~~i~~~~~~~~~~~s~~~dg~i~i~d~~~~~~~~~~~~ 268 (424)
.+|++...| +++.=....... ..+ ...... +. =..+.+++|+|++. |+++ .+|.+.-.+..+... ..
T Consensus 5 ~~l~~v~~d-~~y~G~~P~~~~-~~~~~~a~~i-G~~gw~~~~~laf~P~G~-LYaV--~~G~Ly~~~~~t~~~----~~ 74 (236)
T 1tl2_A 5 SMLRGVYQD-KFYQGTYPQNKN-DNWLARATLI-GKGGWSNFKFLFLSPGGE-LYGV--LNDKIYKGTPPTHDN----DN 74 (236)
T ss_dssp CCEEEEETT-EEEEESCCCSTT-CCHHHHSEEE-ESSSCTTCSEEEECTTSC-EEEE--ETTEEEEESCCCSTT----CC
T ss_pred eEEEEEeCC-cEEecCCCCCcc-cchhhhcccc-CccccccceeEEECCCcc-EEEE--eCCeEEEECCCCCCc----cc
Confidence 367777777 665544443322 111 111111 12 24678999999775 7655 778777766544321 11
Q ss_pred ecccCCC--------eeEEEecCCCCeEEEEEeCCCcEEEEECCCCCCcc-----eee-cCCCCCEEEEEEcCCCCcEEE
Q 014472 269 VVAHQSE--------VNCLAFNPFNEWILATGSTDKTVKLFDLRKISTAL-----HTF-DSHKEEVFQVGWNPKNETILA 334 (424)
Q Consensus 269 ~~~~~~~--------v~~i~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~-----~~~-~~~~~~v~~~~~sp~~~~~l~ 334 (424)
....... -.++.|+|+|. +.++ .||.|+-++-.+.+..- ..+ ..-=..+..|.+.|+|- |.
T Consensus 75 W~~s~t~IG~~Gw~~F~a~~fD~~G~-LYav--~dG~iyr~~pP~~~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~--Ly 149 (236)
T 1tl2_A 75 WMGRAKKIGNGGWNQFQFLFFDPNGY-LYAV--SKDKLYKASPPQSDTDNWIARATEVGSGGWSGFKFLFFHPNGY--LY 149 (236)
T ss_dssp HHHHCEEEECSCGGGCSEEEECTTSC-EEEE--ETTEEEEESCCCSTTCCHHHHSEEEECSSGGGEEEEEECTTSC--EE
T ss_pred ccccccEecccccccceEEEECCCCC-EEEe--CCCEEEEeCCCcCCCCceeccccEeccCCCCceEEEEECCCce--EE
Confidence 1111222 37899999886 4444 56988877753312110 011 11114679999999994 44
Q ss_pred EEeCCCeEE
Q 014472 335 SCCLGRRLM 343 (424)
Q Consensus 335 s~~~dg~i~ 343 (424)
+.. |+.+.
T Consensus 150 av~-dg~ly 157 (236)
T 1tl2_A 150 AVH-GQQFY 157 (236)
T ss_dssp EEE-TTEEE
T ss_pred EEe-CCcEE
Confidence 444 87743
No 317
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=96.38 E-value=0.18 Score=44.24 Aligned_cols=150 Identities=9% Similarity=0.090 Sum_probs=72.1
Q ss_pred CcEEEEEeCC-----CeEEEEECCCCCCCCCeeEecccCCCeeEEEecCCCCeEEEEEeCC-----CcEEEEECCCCC-C
Q 014472 240 EYLFGSVGDD-----QYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATGSTD-----KTVKLFDLRKIS-T 308 (424)
Q Consensus 240 ~~~~~s~~~d-----g~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~l~~g~~d-----g~i~iwd~~~~~-~ 308 (424)
..+++.|+.+ ..+.+||+.+..- ..+..+......-.++.+ +..+++.|+.+ ..+.+||+.+.. .
T Consensus 122 ~~iyv~GG~~~~~~~~~~~~yd~~~~~W-~~~~~~p~~r~~~~~~~~---~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~ 197 (308)
T 1zgk_A 122 GHIYAVGGSHGCIHHNSVERYEPERDEW-HLVAPMLTRRIGVGVAVL---NRLLYAVGGFDGTNRLNSAECYYPERNEWR 197 (308)
T ss_dssp TEEEEECCEETTEECCCEEEEETTTTEE-EECCCCSSCCBSCEEEEE---TTEEEEECCBCSSCBCCCEEEEETTTTEEE
T ss_pred CEEEEEcCCCCCcccccEEEECCCCCeE-eECCCCCccccceEEEEE---CCEEEEEeCCCCCCcCceEEEEeCCCCeEe
Confidence 3577676643 3588899876541 111111111112222333 33477777754 458899987521 1
Q ss_pred cceeecCCCCCEEEEEEcCCCCcEEEEEeCC-----CeEEEeeCCCCCcccCCCccCCCCCeeeEEEcCCCCCcceEEeC
Q 014472 309 ALHTFDSHKEEVFQVGWNPKNETILASCCLG-----RRLMVWDLSRIDEEQTPEDAEDGPPELLFIHGGHTSKISDFSWN 383 (424)
Q Consensus 309 ~~~~~~~~~~~v~~~~~sp~~~~~l~s~~~d-----g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~ 383 (424)
.+..+......-..+.+ ++ .+++.|+.+ ..+.+||+.+..-.... ...........+.+
T Consensus 198 ~~~~~p~~r~~~~~~~~--~~-~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~------------~~p~~r~~~~~~~~- 261 (308)
T 1zgk_A 198 MITAMNTIRSGAGVCVL--HN-CIYAAGGYDGQDQLNSVERYDVETETWTFVA------------PMKHRRSALGITVH- 261 (308)
T ss_dssp ECCCCSSCCBSCEEEEE--TT-EEEEECCBCSSSBCCCEEEEETTTTEEEECC------------CCSSCCBSCEEEEE-
T ss_pred eCCCCCCccccceEEEE--CC-EEEEEeCCCCCCccceEEEEeCCCCcEEECC------------CCCCCccceEEEEE-
Confidence 11111111112222333 34 467777654 45888998764321110 00000001111222
Q ss_pred CCCCcEEEEEeCC-----CcEEEEecCCCCCCC
Q 014472 384 PCEDWVISSVAED-----NILQIWQMAENIYHD 411 (424)
Q Consensus 384 ~~~~~~l~s~~~d-----~~i~iw~~~~~~~~~ 411 (424)
++. +++.|+.+ ..+.+||+.++.+..
T Consensus 262 -~~~-i~v~GG~~~~~~~~~v~~yd~~~~~W~~ 292 (308)
T 1zgk_A 262 -QGR-IYVLGGYDGHTFLDSVECYDPDTDTWSE 292 (308)
T ss_dssp -TTE-EEEECCBCSSCBCCEEEEEETTTTEEEE
T ss_pred -CCE-EEEEcCcCCCcccceEEEEcCCCCEEee
Confidence 445 67777643 457889988876543
No 318
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=96.32 E-value=0.54 Score=41.86 Aligned_cols=244 Identities=11% Similarity=0.088 Sum_probs=124.1
Q ss_pred cCCceeEEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEE----ecCCCCeeeEEecCC---CCceEEE
Q 014472 124 HDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRL----RGHSTEGYGLSWSKF---KEGHLLS 196 (424)
Q Consensus 124 h~~~v~~i~~~p~~~~~latg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~----~~h~~~v~~l~~~~~---~~~~l~s 196 (424)
.-.....|+|.|++. ++++--..|.|++++... +.......+ .........|+++|+ +. .|..
T Consensus 30 gL~~P~~ia~~pdG~-llVter~~G~I~~v~~~~--------g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g-~lYv 99 (347)
T 3das_A 30 GLNSPWGLAPLPGGD-LLVSSRDEATITRVDAKT--------GRKTELGEVPGVSPSGEGGLLGIALSPDYASDH-MVYA 99 (347)
T ss_dssp CCSSEEEEEECTTSC-EEEEETTTCEEEEECTTT--------CCEEEEEECTTCCCBTTBSEEEEEECTTHHHHC-EEEE
T ss_pred CCCCceEEEEcCCCc-EEEEEecCCEEEEEECCC--------CcEeeecccCceeecCCCCceeeEeccccccCC-EEEE
Confidence 356778999999986 666644489999987543 111111111 123456789999995 33 3443
Q ss_pred E---eCCCcEEEEeCCCCC----CCCcccce-eeee-cCCcceeeEEeeCCCCcEEEEEeC-------------CCeEEE
Q 014472 197 G---SDDAQICLWDINAAP----KNKSLEAM-QIFK-VHEGVVEDVAWHLRHEYLFGSVGD-------------DQYLLI 254 (424)
Q Consensus 197 ~---~~dg~i~vwd~~~~~----~~~~~~~~-~~~~-~~~~~v~~i~~~~~~~~~~~s~~~-------------dg~i~i 254 (424)
. ..++.|.-|.+.... .....+.+ ..+. ........|.|.|++. |+++.+. .|.|.-
T Consensus 100 ~yt~~~~~~v~R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG~-Lyvt~Gd~~~~~~~qd~~~~~G~IlR 178 (347)
T 3das_A 100 YFTSASDNRIVRMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDKM-LYAGTGESGDTGLSQDRKSLGGKILR 178 (347)
T ss_dssp EEECSSSEEEEEEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTSC-EEEECBCTTCGGGTTCTTCSTTCEEE
T ss_pred EEecCCCCEEEEEEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCCCC-EEEEECCCCCCccccCCCCCCCEEEE
Confidence 2 244566666665421 11111111 1111 1112346799999985 6556442 355555
Q ss_pred EECCCCC----C--CCCeeEecccCCCeeEEEecCCCCeEEEEE-eCCCcEEEEECCCC-----------------CCcc
Q 014472 255 WDLRTPS----V--SKPVQSVVAHQSEVNCLAFNPFNEWILATG-STDKTVKLFDLRKI-----------------STAL 310 (424)
Q Consensus 255 ~d~~~~~----~--~~~~~~~~~~~~~v~~i~~~~~~~~~l~~g-~~dg~i~iwd~~~~-----------------~~~~ 310 (424)
++....- . ...+.. .+| .....++|+|++. ++++= +.++.=.|--+... ..++
T Consensus 179 i~~dG~ip~~nPf~~~~i~a-~G~-RNp~Gla~dp~G~-L~~~d~g~~~~deln~i~~G~nyGwP~~~g~~~~~~~~~P~ 255 (347)
T 3das_A 179 MTPDGEPAPGNPFPGSPVYS-YGH-RNVQGLAWDDKQR-LFASEFGQDTWDELNAIKPGDNYGWPEAEGKGGGSGFHDPV 255 (347)
T ss_dssp ECTTSSBCTTCSSTTCCEEE-BCC-SBCCEEEECTTCC-EEEEECCSSSCEEEEEECTTCBCCTTTCCSSCCCTTCCCCS
T ss_pred EeCCCCccCCCCCCCCeEEe-eCC-CCcceEEECCCCC-EEEEecCCCCCceeeEEcCCCEecCCcccCCCCCccccCCc
Confidence 5554220 0 001111 233 3456899999876 44432 22332222222221 1233
Q ss_pred eeecCCCCCEEEEEEcCCCCcEEEEEeCCCeEEEeeCCCCCcccCCCccCCCCCeeeEEEcCCCCCcceEEeCCCCCcEE
Q 014472 311 HTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPEDAEDGPPELLFIHGGHTSKISDFSWNPCEDWVI 390 (424)
Q Consensus 311 ~~~~~~~~~v~~~~~sp~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l 390 (424)
..+..+......++|.. + .++...-..+.|....+...... . +....+.+....+.+|+..|+|. ++
T Consensus 256 ~~~~~~~~ap~G~~~~~-g-~~~~~~l~~~~l~~v~~~~~~~~--------~--~~e~~l~~~~gR~~dv~~~pDG~-ly 322 (347)
T 3das_A 256 AQWSTDEASPSGIAYAE-G-SVWMAGLRGERLWRIPLKGTAAA--------A--DPQAFLEGEYGRLRTVAPAGGDK-LW 322 (347)
T ss_dssp EEECTTTCCEEEEEEET-T-EEEEEESTTCSEEEEEEETTEES--------S--CCEEESTTTSSCEEEEEEEETTE-EE
T ss_pred EecCCCCCCCcceEEEc-C-ceeeccccCCEEEEEEecCCcee--------c--ceEEeecCCCCCccEEEECCCCc-EE
Confidence 34433334667778774 3 35555555555655555432110 0 11122334446789999999998 45
Q ss_pred EEEe
Q 014472 391 SSVA 394 (424)
Q Consensus 391 ~s~~ 394 (424)
++.+
T Consensus 323 v~td 326 (347)
T 3das_A 323 LVTS 326 (347)
T ss_dssp EEEC
T ss_pred EEEc
Confidence 5443
No 319
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=96.29 E-value=0.58 Score=41.92 Aligned_cols=223 Identities=9% Similarity=0.070 Sum_probs=109.8
Q ss_pred CCeeeEEecCCCCceEEEEeCCCcEEEEeCCCCCCCCcccce-eeeecCCcceeeEEeeCC---CCcEEEEEeC------
Q 014472 179 TEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAM-QIFKVHEGVVEDVAWHLR---HEYLFGSVGD------ 248 (424)
Q Consensus 179 ~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~-~~~~~~~~~v~~i~~~~~---~~~~~~s~~~------ 248 (424)
.....|+|.|++.. |+++...|.|++++.... ....+..+ ............|+++|+ +..++++-..
T Consensus 18 ~~P~~i~~~pdG~~-l~V~e~~G~i~~~~~~g~-~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~~~~~~~~g~ 95 (353)
T 2g8s_A 18 DHPWALAFLPDNHG-MLITLRGGELRHWQAGKG-LSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLSYSEVGDDGK 95 (353)
T ss_dssp SSEEEEEECSTTCC-EEEEETTTEEEEEETTTE-ECCCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEEEEEEEECSSSC
T ss_pred CCcEEEEEcCCCCE-EEEEeCCceEEEEeCCCc-eeeEecCCcccccCCCCCceeEEECCCCCCCCEEEEEEeCCCCCCC
Confidence 35689999998863 666677899999985322 11111111 111122346789999996 5567666443
Q ss_pred -CCeEEEEECCCCCC-CCCeeE----ec---ccCCCeeEEEecCCCCeEEEEEeC-------------CCcEEEEECCCC
Q 014472 249 -DQYLLIWDLRTPSV-SKPVQS----VV---AHQSEVNCLAFNPFNEWILATGST-------------DKTVKLFDLRKI 306 (424)
Q Consensus 249 -dg~i~i~d~~~~~~-~~~~~~----~~---~~~~~v~~i~~~~~~~~~l~~g~~-------------dg~i~iwd~~~~ 306 (424)
...|..|++..... ...... +. ........|+|.|+|. ++++-+. .|.|.-+|....
T Consensus 96 ~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~pdG~-Lyv~~Gd~~~~~~~q~~~~~~g~I~ri~~dG~ 174 (353)
T 2g8s_A 96 AGTAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDGKGY-LFIALGENNQRPTAQDLDKLQGKLVRLTDQGE 174 (353)
T ss_dssp EEEEEEEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECSSSE-EEEEECCTTCGGGGGCTTSCTTEEEEEETTSC
T ss_pred ceeEEEEEEECCCCCCCCceEEEEEECCCCCCCcccCccEEECCCCc-EEEEECCCCCCCccCCCCCCCeEEEEECCCCC
Confidence 23566666643210 000111 11 1112246799999995 4544433 245666666531
Q ss_pred C---C--------cceeecCCCCCEEEEEEcC-CCCcEEEEEe-CCCeEEEeeCCCCCccc----------C---CC---
Q 014472 307 S---T--------ALHTFDSHKEEVFQVGWNP-KNETILASCC-LGRRLMVWDLSRIDEEQ----------T---PE--- 357 (424)
Q Consensus 307 ~---~--------~~~~~~~~~~~v~~~~~sp-~~~~~l~s~~-~dg~i~iwd~~~~~~~~----------~---~~--- 357 (424)
- . ....+..--.....++|+| .+ .++++-. .++.=.|.-+..+..-- . ..
T Consensus 175 ~p~~npf~~~~~~~~~i~a~G~rnp~gl~~d~~~g-~l~~~d~g~~~~dei~~i~~G~nyGwp~~~~~~~~~~~~~~~~~ 253 (353)
T 2g8s_A 175 IPDDNPFIKESGVRAEIWSYGIRNPQGMAMNPWSN-ALWLNEHGPRGGDEINIPQKGKNYGWPLATWGINYSGFKIPEAK 253 (353)
T ss_dssp CCTTCTTTTSTTSCTTEEEECCSEEEEEEEETTTT-EEEEEEECSBSCEEEECCCTTCBCCTTTBCSSBCTTSSCCTTCC
T ss_pred CCCCCCCcCCCCCCccEEEEcCcCccceEEECCCC-CEEEEecCCCCCcEEeEeccCCcCCCCCccCCCCCCCCccCccc
Confidence 0 0 1111211123468899999 55 4444422 22222333332222100 0 00
Q ss_pred -ccCCCCCeeeEEEcCCCCCcceEEeCC-------CCCcEEEEEeCCCcEEEEecCCC
Q 014472 358 -DAEDGPPELLFIHGGHTSKISDFSWNP-------CEDWVISSVAEDNILQIWQMAEN 407 (424)
Q Consensus 358 -~~~~~~~~~~~~~~~h~~~v~~~~~~~-------~~~~~l~s~~~d~~i~iw~~~~~ 407 (424)
.........+..+..| ..+..+.|.. ++. ++++.-..+.|...++..+
T Consensus 254 ~~~~~~~~~P~~~~~~~-~ap~G~~~y~g~~fp~~~g~-l~v~~~~~~~v~~~~~~~~ 309 (353)
T 2g8s_A 254 GEIVAGTEQPVFYWKDS-PAVSGMAFYNSDKFPQWQQK-LFIGALKDKDVIVMSVNGD 309 (353)
T ss_dssp BSSCTTSCCCSEEESSC-CCEEEEEEECCSSSGGGTTE-EEEEETTTTEEEEEEEETT
T ss_pred CCCCCCccCCeEEeCCC-cCcceeEEECCccCcccCCc-EEEEEccCCEEEEEEeCCC
Confidence 0000111223344434 3467788753 455 5666666777777776643
No 320
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=96.17 E-value=0.41 Score=50.48 Aligned_cols=207 Identities=13% Similarity=0.227 Sum_probs=119.2
Q ss_pred EEecCCCCceEEEEeCCCcEEEEeCCCCCCCCcccceeeeecCCcceeeEEeeCCCCcEEEEEeCCCeEEEEECCCCCCC
Q 014472 184 LSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVS 263 (424)
Q Consensus 184 l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~~s~~~dg~i~i~d~~~~~~~ 263 (424)
.-.+|..+ .++.= ...++.|+|+.+..+.+... ...+|.--.|-.... ++-. .+..|+-|++....
T Consensus 71 AIMnP~~~-iiALr-ag~~lQiFnl~~k~klks~~-------~~e~VvfWkWis~~~--l~lV-T~~aVyHW~~~~~s-- 136 (1630)
T 1xi4_A 71 AIMNPASK-VIALK-AGKTLQIFNIEMKSKMKAHT-------MTDDVTFWKWISLNT--VALV-TDNAVYHWSMEGES-- 136 (1630)
T ss_pred hccCCCcc-eEEEe-cCCeEEEeehHHhhhhcccc-------cCCCceEEEecCCCe--eEEE-cCCeEEEeccCCCC--
Confidence 33466554 44443 36789999998764433221 245677777765543 3333 35679999997533
Q ss_pred CCeeEeccc----CCCeeEEEecCCCCeEEEEEe------CCCcEEEEECCCCCCcceeecCCCCCEEEEEEc--CCCCc
Q 014472 264 KPVQSVVAH----QSEVNCLAFNPFNEWILATGS------TDKTVKLFDLRKISTALHTFDSHKEEVFQVGWN--PKNET 331 (424)
Q Consensus 264 ~~~~~~~~~----~~~v~~i~~~~~~~~~l~~g~------~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~s--p~~~~ 331 (424)
.|...+..| ...|..-..+++.++++++|- -.|.+.+|.... ..-+.+.+|.+.-..+... +....
T Consensus 137 ~P~k~fdR~~~L~~~QIinY~~d~~~kW~~l~gi~~~~~~v~G~mQLyS~er--~~sQ~iegha~~F~~~~~~~~~~~~~ 214 (1630)
T 1xi4_A 137 QPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDR--KVSQPIEGHAASFAQFKMEGNAEEST 214 (1630)
T ss_pred ccHHHHhcchhcccCeeEEeeeCCCCCeEEEEeeccCCCcccceeeeeeccc--ccchhhhHhHhhhheeccCCCCCCce
Confidence 344444444 456777788899998887765 358899998875 4445566665544444332 22223
Q ss_pred EEEEEeC---CCeEEEeeCCCCCcccCCCccCCCCCeeeEEEcCCCCCcceEEeCCCCCcEEEEEeCCCcEEEEecCCCC
Q 014472 332 ILASCCL---GRRLMVWDLSRIDEEQTPEDAEDGPPELLFIHGGHTSKISDFSWNPCEDWVISSVAEDNILQIWQMAENI 408 (424)
Q Consensus 332 ~l~s~~~---dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~ 408 (424)
+++-+.. .+.++|-++......... .......+.+....-..-..++..++.-. ++.....-|.|+++|+.++.
T Consensus 215 l~~f~~~~~~g~kLhi~Ei~~~~~~~~~--f~kk~~~~~~~~~~~~Dfpv~~~vs~k~g-~iy~itk~G~~~~~d~~t~~ 291 (1630)
T 1xi4_A 215 LFCFAVRGQAGGKLHIIEVGTPPTGNQP--FPKKAVDVFFPPEAQNDFPVAMQISEKHD-VVFLITKYGYIHLYDLETGT 291 (1630)
T ss_pred EEEEEEecCCCceEEEEecCCCccCCCC--CccccccccCCcccccCcceEEEeccccC-EEEEEecCceEEEEecccch
Confidence 4433322 368999998653110000 00000011111111233345566777666 66677789999999999984
Q ss_pred C
Q 014472 409 Y 409 (424)
Q Consensus 409 ~ 409 (424)
.
T Consensus 292 ~ 292 (1630)
T 1xi4_A 292 C 292 (1630)
T ss_pred h
Confidence 4
No 321
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=96.12 E-value=0.78 Score=41.79 Aligned_cols=148 Identities=12% Similarity=0.146 Sum_probs=91.4
Q ss_pred CCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEecC---C-CCeeeEEecCCCCceEEEEeCCCcEEEEeCCCC
Q 014472 136 QNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGH---S-TEGYGLSWSKFKEGHLLSGSDDAQICLWDINAA 211 (424)
Q Consensus 136 ~~~~~latg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~h---~-~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~ 211 (424)
++..+++. .++.||.-++... ...+.+..- . ..|..+..+|+|. +||..+ +..|.|-.+..+
T Consensus 31 n~t~i~~a--~~n~iR~~~i~~~----------~~Yk~L~~~~~i~f~~i~qlvlSpsG~-lLAl~g-~~~V~Vv~LP~~ 96 (452)
T 3pbp_A 31 NGTRIVFI--QDNIIRWYNVLTD----------SLYHSLNFSRHLVLDDTFHVISSTSGD-LLCLFN-DNEIFVMEVPWG 96 (452)
T ss_dssp TTTEEEEE--ETTEEEEEETTTC----------SSCEEEECTTTCCCCTTCEEEECTTSS-EEEEEC-SSEEEEEECCTT
T ss_pred CCCEEEEE--ECCEEEEEECCCC----------CcceEEecCcccccCceeEEEECCCCC-EEEEec-CCeEEEEEecCc
Confidence 45444443 3578888888751 123333322 2 2678899999988 566554 568999988743
Q ss_pred CCCCc-------ccceeeeec------CCcceeeEEeeCCCCc--EEEEEeCCCeEEEEECCCCCCCCCeeEec------
Q 014472 212 PKNKS-------LEAMQIFKV------HEGVVEDVAWHLRHEY--LFGSVGDDQYLLIWDLRTPSVSKPVQSVV------ 270 (424)
Q Consensus 212 ~~~~~-------~~~~~~~~~------~~~~v~~i~~~~~~~~--~~~s~~~dg~i~i~d~~~~~~~~~~~~~~------ 270 (424)
..... ++ ...+.- ...+|..+.|||-+.. .+++-..|+.|++||+.... ..|. .+.
T Consensus 97 ~~~~~~~~~~~~~q-~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~s~-~~P~-~L~k~~~~f 173 (452)
T 3pbp_A 97 YSNVEDVSIQDAFQ-IFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILNSQ-EKPI-VLNKPNNSF 173 (452)
T ss_dssp CSCCCCHHHHHTTE-EEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTCTT-SCCE-EESCCCSEE
T ss_pred cccCcccccccccc-eeEEEcCCcccCCCCceeEEEeccccCCCCeEEEEecCCEEEEEEcccCC-CCCc-chhcccccc
Confidence 22111 11 112221 2567999999997643 56688899999999998733 2233 221
Q ss_pred ---ccCCCeeEEEecCCCCeEEEEEe--CCCcEEEE
Q 014472 271 ---AHQSEVNCLAFNPFNEWILATGS--TDKTVKLF 301 (424)
Q Consensus 271 ---~~~~~v~~i~~~~~~~~~l~~g~--~dg~i~iw 301 (424)
.....|.+++|.+++= .|...+ ..|.|+-.
T Consensus 174 g~d~~~~ev~S~~Fg~~~l-TLYvl~~t~~GDIYAl 208 (452)
T 3pbp_A 174 GLDARVNDITDLEFSKDGL-TLYCLNTTEGGDIFAF 208 (452)
T ss_dssp ESCSSCCCEEEEEECTTSS-CEEEEECTTSCEEEEE
T ss_pred CCCcccceEEEEEEcCCCc-EEEEEecCCCCCEEEE
Confidence 2236788999999654 455544 67777654
No 322
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=96.04 E-value=0.45 Score=41.78 Aligned_cols=105 Identities=13% Similarity=0.142 Sum_probs=49.5
Q ss_pred CcEEEEEeCC-------CeEEEEECCCCCCCCCeeEecccCCCeeEEEecCCCCeEEEEEeC------CCcEEEEECCCC
Q 014472 240 EYLFGSVGDD-------QYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATGST------DKTVKLFDLRKI 306 (424)
Q Consensus 240 ~~~~~s~~~d-------g~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~l~~g~~------dg~i~iwd~~~~ 306 (424)
..+++.|+.+ ..+.+||+.+..- ..+..+......- +++. .++ .+++.|+. -..+.+||+.+.
T Consensus 110 ~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W-~~~~~~p~~r~~~-~~~~-~~~-~iyv~GG~~~~~~~~~~~~~yd~~~~ 185 (318)
T 2woz_A 110 DKIYVVAGKDLQTEASLDSVLCYDPVAAKW-SEVKNLPIKVYGH-NVIS-HNG-MIYCLGGKTDDKKCTNRVFIYNPKKG 185 (318)
T ss_dssp TEEEEEEEEBTTTCCEEEEEEEEETTTTEE-EEECCCSSCEESC-EEEE-ETT-EEEEECCEESSSCBCCCEEEEETTTT
T ss_pred CEEEEEcCccCCCCcccceEEEEeCCCCCE-eECCCCCCccccc-EEEE-ECC-EEEEEcCCCCCCCccceEEEEcCCCC
Confidence 4577777754 3478889876541 1111111111111 2222 224 46777764 235899998762
Q ss_pred C-CcceeecCCCCCEEEEEEcCCCCcEEEEEeCC-----CeEEEeeCCCCC
Q 014472 307 S-TALHTFDSHKEEVFQVGWNPKNETILASCCLG-----RRLMVWDLSRID 351 (424)
Q Consensus 307 ~-~~~~~~~~~~~~v~~~~~sp~~~~~l~s~~~d-----g~i~iwd~~~~~ 351 (424)
. ..+..+......-..+.+ ++ .+++.|+.+ ..+.+||+.+..
T Consensus 186 ~W~~~~~~p~~r~~~~~~~~--~~-~iyv~GG~~~~~~~~~~~~yd~~~~~ 233 (318)
T 2woz_A 186 DWKDLAPMKTPRSMFGVAIH--KG-KIVIAGGVTEDGLSASVEAFDLKTNK 233 (318)
T ss_dssp EEEEECCCSSCCBSCEEEEE--TT-EEEEEEEEETTEEEEEEEEEETTTCC
T ss_pred EEEECCCCCCCcccceEEEE--CC-EEEEEcCcCCCCccceEEEEECCCCe
Confidence 1 111111111111122222 34 466666643 246788887643
No 323
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=96.02 E-value=0.72 Score=48.69 Aligned_cols=195 Identities=9% Similarity=0.135 Sum_probs=111.5
Q ss_pred EecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCCeeeEEecCCCCceEEEEeCCCcEEEEeCCCC
Q 014472 132 RYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAA 211 (424)
Q Consensus 132 ~~~p~~~~~latg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~ 211 (424)
-.+|..+ ++|.-. ..++.|||+.. ........ ....|.-=.|-.... |+-.+ +..|.-|++...
T Consensus 72 IMnP~~~-iiALra-g~~lQiFnl~~----------k~klks~~-~~e~VvfWkWis~~~--l~lVT-~~aVyHW~~~~~ 135 (1630)
T 1xi4_A 72 IMNPASK-VIALKA-GKTLQIFNIEM----------KSKMKAHT-MTDDVTFWKWISLNT--VALVT-DNAVYHWSMEGE 135 (1630)
T ss_pred ccCCCcc-eEEEec-CCeEEEeehHH----------hhhhcccc-cCCCceEEEecCCCe--eEEEc-CCeEEEeccCCC
Confidence 3456554 666654 67999999987 12222222 234566667765443 44433 358999999653
Q ss_pred CCCCcccceeeeecC----CcceeeEEeeCCCCcEEEEEe------CCCeEEEEECCCCCCCCCeeEecccCCCeeEEEe
Q 014472 212 PKNKSLEAMQIFKVH----EGVVEDVAWHLRHEYLFGSVG------DDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAF 281 (424)
Q Consensus 212 ~~~~~~~~~~~~~~~----~~~v~~i~~~~~~~~~~~s~~------~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~ 281 (424)
. .+.+.+..| ...|..-+.+++.+.++++|- -.|.+.+|....... +.+.+|-.....+..
T Consensus 136 s-----~P~k~fdR~~~L~~~QIinY~~d~~~kW~~l~gi~~~~~~v~G~mQLyS~er~~s----Q~iegha~~F~~~~~ 206 (1630)
T 1xi4_A 136 S-----QPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKVS----QPIEGHAASFAQFKM 206 (1630)
T ss_pred C-----ccHHHHhcchhcccCeeEEeeeCCCCCeEEEEeeccCCCcccceeeeeecccccc----hhhhHhHhhhheecc
Confidence 2 233333333 356667777888887776663 458899998876542 333455443333332
Q ss_pred c--CCCCeEEEEEeC---CCcEEEEECCCC--CCcce------eecC---CCCCEEEEEEcCCCCcEEEEEeCCCeEEEe
Q 014472 282 N--PFNEWILATGST---DKTVKLFDLRKI--STALH------TFDS---HKEEVFQVGWNPKNETILASCCLGRRLMVW 345 (424)
Q Consensus 282 ~--~~~~~~l~~g~~---dg~i~iwd~~~~--~~~~~------~~~~---~~~~v~~~~~sp~~~~~l~s~~~dg~i~iw 345 (424)
. +....+|+.+.. .+.++|-++... +.+.. .+.. ...-..++..++... ++..-+.-|.|.+|
T Consensus 207 ~~~~~~~~l~~f~~~~~~g~kLhi~Ei~~~~~~~~~f~kk~~~~~~~~~~~~Dfpv~~~vs~k~g-~iy~itk~G~~~~~ 285 (1630)
T 1xi4_A 207 EGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHD-VVFLITKYGYIHLY 285 (1630)
T ss_pred CCCCCCceEEEEEEecCCCceEEEEecCCCccCCCCCccccccccCCcccccCcceEEEeccccC-EEEEEecCceEEEE
Confidence 2 111223333322 268899888543 11111 1111 123345666777664 67788889999999
Q ss_pred eCCCCCc
Q 014472 346 DLSRIDE 352 (424)
Q Consensus 346 d~~~~~~ 352 (424)
|+.++..
T Consensus 286 d~~t~~~ 292 (1630)
T 1xi4_A 286 DLETGTC 292 (1630)
T ss_pred ecccchh
Confidence 9999754
No 324
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=95.99 E-value=1.9 Score=45.21 Aligned_cols=201 Identities=12% Similarity=0.065 Sum_probs=101.7
Q ss_pred cEEEEEEeccCCceeEEEecCCC-----CcEEEEEec-CCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCCeeeEEecC
Q 014472 115 KVQIIQQINHDGEVNRARYMPQN-----PFLIATKTV-SAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSK 188 (424)
Q Consensus 115 ~~~~~~~~~h~~~v~~i~~~p~~-----~~~latg~~-dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~ 188 (424)
.+.......-.+.|.|+++.|.. ..++|+|.. |++|+|+++... .......+.. .....++.+..
T Consensus 543 ~L~~~~~~~l~~evscl~i~~~~~~~~~s~~~aVg~~~d~tv~I~sL~~l--------~~~~~~~L~~-~~~p~si~l~~ 613 (1158)
T 3ei3_A 543 ELRQISHTEMEHEVACLDITPLGDSNGLSPLCAIGLWTDISARILKLPSF--------ELLHKEMLGG-EIIPRSILMTT 613 (1158)
T ss_dssp EEEEEEEEECSSCEEEEECCCCSSSTTCCSEEEEEETTTTEEEEEETTTC--------CEEEEEECCS-SCCEEEEEEEE
T ss_pred ceeeecccCCCCceEEEEeecCCCCcccccEEEEEECCCCEEEEEECCCC--------CeEEEEECCC-CCCCcEEEEEE
Confidence 44555555667899999998642 358999996 999999999751 1111111211 12333443322
Q ss_pred -CCCceEEEEeCCCcEEEEeCCCCCCCCccccee-eeecCCcceeeEEeeCCCCcEEEEEeCCCeEEEEECCCCCCCCCe
Q 014472 189 -FKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQ-IFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPV 266 (424)
Q Consensus 189 -~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~-~~~~~~~~v~~i~~~~~~~~~~~s~~~dg~i~i~d~~~~~~~~~~ 266 (424)
.+..+|..|-.||.+.-+.++... ..+...+ .+-+ ..++.=..+...+..-+.+++ +.-..+|--+. . +
T Consensus 614 ~~~~~~L~igl~dG~l~~~~~d~~t--g~l~d~r~~~LG-~~pv~L~~~~~~~~~~V~a~s-~rp~liy~~~~-~----l 684 (1158)
T 3ei3_A 614 FESSHYLLCALGDGALFYFGLNIET--GLLSDRKKVTLG-TQPTVLRTFRSLSTTNVFACS-DRPTVIYSSNH-K----L 684 (1158)
T ss_dssp ETTEEEEEEEETTSEEEEEEECTTT--CCEEEEEEEECC-SSCCEEEEEESSSCEEEEEES-SSCEEEEESSS-S----E
T ss_pred eCCCcEEEEEeCCCeEEEEEEcCCC--CccccceeEEcC-CCceEEEEEeeCCceeEEEEC-CCCEEEEEcCC-c----e
Confidence 133478899999998776654321 1111111 1222 334443344433332222333 33444443322 1 2
Q ss_pred eEecccCCCeeEE-EecCCC-CeEEEEEeCCCcEEEEECCCCCC-cceeecCCCCCEEEEEEcCCCCcEEEE
Q 014472 267 QSVVAHQSEVNCL-AFNPFN-EWILATGSTDKTVKLFDLRKIST-ALHTFDSHKEEVFQVGWNPKNETILAS 335 (424)
Q Consensus 267 ~~~~~~~~~v~~i-~~~~~~-~~~l~~g~~dg~i~iwd~~~~~~-~~~~~~~~~~~v~~~~~sp~~~~~l~s 335 (424)
....-.-..+.++ .|+... +.-++.. .++.++|.-+..... .+.++.. ...+..++++|..+.+.+.
T Consensus 685 ~~s~l~~~~v~~~~~F~se~~~~g~v~~-~~~~LrI~~i~~~~~~~~~~ipL-~~Tprri~y~~~~~~~~v~ 754 (1158)
T 3ei3_A 685 VFSNVNLKEVNYMCPLNSDGYPDSLALA-NNSTLTIGTIDEIQKLHIRTVPL-YESPRKICYQEVSQCFGVL 754 (1158)
T ss_dssp EEEEBSSSCCCEEEEECCSSSTTEEEEE-CSSCEEEEEECCSSSEEEEEEEC-SSEEEEEEEEGGGTEEEEE
T ss_pred EEeccChHHhceEeccCcccCCCcEEEE-cCCceEEEEecccCCeeEEEEeC-CCCceEEEEcCCCCEEEEE
Confidence 2111122234333 353321 1124433 355699988865322 2333333 5688999999987643333
No 325
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=95.70 E-value=0.75 Score=42.83 Aligned_cols=110 Identities=10% Similarity=0.107 Sum_probs=60.8
Q ss_pred CCCCeeeEEecCCCCceEEEEeCCC-cEEEEeCCCCCCCCcccceeeee------cCCcceeeEEeeCC---CCcEEEEE
Q 014472 177 HSTEGYGLSWSKFKEGHLLSGSDDA-QICLWDINAAPKNKSLEAMQIFK------VHEGVVEDVAWHLR---HEYLFGSV 246 (424)
Q Consensus 177 h~~~v~~l~~~~~~~~~l~s~~~dg-~i~vwd~~~~~~~~~~~~~~~~~------~~~~~v~~i~~~~~---~~~~~~s~ 246 (424)
.-...++|+|.|++. +++ +...+ .|.+++..++.. ..+..+. .....+..|+|+|+ +..++++-
T Consensus 25 ~l~~P~~~a~~pdG~-l~V-~e~~gg~I~~~~~~~g~~----~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~ 98 (454)
T 1cru_A 25 NLNKPHALLWGPDNQ-IWL-TERATGKILRVNPESGSV----KTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISG 98 (454)
T ss_dssp CCSSEEEEEECTTSC-EEE-EETTTCEEEEECTTTCCE----EEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEE
T ss_pred CCCCceEEEEcCCCc-EEE-EEcCCCEEEEEECCCCcE----eEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEE
Confidence 344678999999886 444 45554 688887654321 1111111 12456789999996 56676665
Q ss_pred eC------------CCeEEEEECCCCCC----CCCee-Eec-ccCCCeeEEEecCCCCeEEEEE
Q 014472 247 GD------------DQYLLIWDLRTPSV----SKPVQ-SVV-AHQSEVNCLAFNPFNEWILATG 292 (424)
Q Consensus 247 ~~------------dg~i~i~d~~~~~~----~~~~~-~~~-~~~~~v~~i~~~~~~~~~l~~g 292 (424)
+. ...|.-++...... .+.+. .+. ........|+|.|+|..++++|
T Consensus 99 s~~~~~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~Lyv~~G 162 (454)
T 1cru_A 99 TFKNPKSTDKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQKIYYTIG 162 (454)
T ss_dssp EEECTTC--CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSCEEEEEC
T ss_pred eccccCCCccccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCeEEEEEC
Confidence 43 23455565543210 01111 111 1123578999999997444444
No 326
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=95.67 E-value=0.47 Score=41.18 Aligned_cols=190 Identities=14% Similarity=0.096 Sum_probs=86.7
Q ss_pred cEEEEEecC-----CeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCCeeeEEecCCCCceEEEEeCC-----CcEEEEeC
Q 014472 139 FLIATKTVS-----AEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDD-----AQICLWDI 208 (424)
Q Consensus 139 ~~latg~~d-----g~v~iwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~d-----g~i~vwd~ 208 (424)
.+++.|+.+ ..+.+||..+.... .+.....+.........+.. ++ .+++.|+.+ ..+.+||+
T Consensus 64 ~l~v~GG~~~~~~~~~~~~~d~~~~~~~-----~W~~~~~~p~~r~~~~~~~~--~~-~lyv~GG~~~~~~~~~~~~~d~ 135 (301)
T 2vpj_A 64 RIYVIGGYDGRSRLSSVECLDYTADEDG-----VWYSVAPMNVRRGLAGATTL--GD-MIYVSGGFDGSRRHTSMERYDP 135 (301)
T ss_dssp EEEEECCBCSSCBCCCEEEEETTCCTTC-----CCEEECCCSSCCBSCEEEEE--TT-EEEEECCBCSSCBCCEEEEEET
T ss_pred EEEEEcCCCCCccCceEEEEECCCCCCC-----eeEECCCCCCCccceeEEEE--CC-EEEEEcccCCCcccceEEEEcC
Confidence 477777754 46888998762100 02111111111111112222 23 356666543 35788888
Q ss_pred CCCCCCCcccceeeeecCCcceeeEEeeCCCCcEEEEEeCC-----CeEEEEECCCCCCCCCeeEecccCCCeeEEEecC
Q 014472 209 NAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDD-----QYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNP 283 (424)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~~s~~~d-----g~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~~ 283 (424)
.+.. +..+............+.+ + ..+++.|+.+ ..+.+||+.+..- ..+..+........++.+
T Consensus 136 ~~~~----W~~~~~~p~~r~~~~~~~~--~-~~iyv~GG~~~~~~~~~~~~~d~~~~~W-~~~~~~p~~r~~~~~~~~-- 205 (301)
T 2vpj_A 136 NIDQ----WSMLGDMQTAREGAGLVVA--S-GVIYCLGGYDGLNILNSVEKYDPHTGHW-TNVTPMATKRSGAGVALL-- 205 (301)
T ss_dssp TTTE----EEEEEECSSCCBSCEEEEE--T-TEEEEECCBCSSCBCCCEEEEETTTTEE-EEECCCSSCCBSCEEEEE--
T ss_pred CCCe----EEECCCCCCCcccceEEEE--C-CEEEEECCCCCCcccceEEEEeCCCCcE-EeCCCCCcccccceEEEE--
Confidence 6542 2222222111111112222 3 4577777654 4588999877542 111111111112222333
Q ss_pred CCCeEEEEEeCC-----CcEEEEECCCCC-CcceeecCCCCCEEEEEEcCCCCcEEEEEeCC-----CeEEEeeCCCC
Q 014472 284 FNEWILATGSTD-----KTVKLFDLRKIS-TALHTFDSHKEEVFQVGWNPKNETILASCCLG-----RRLMVWDLSRI 350 (424)
Q Consensus 284 ~~~~~l~~g~~d-----g~i~iwd~~~~~-~~~~~~~~~~~~v~~~~~sp~~~~~l~s~~~d-----g~i~iwd~~~~ 350 (424)
+..+++.|+.+ ..+.+||+.+.. ..+..+.........+.+ ++ .+++.|+.+ ..+.+||+.+.
T Consensus 206 -~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~-~i~v~GG~~~~~~~~~v~~yd~~~~ 279 (301)
T 2vpj_A 206 -NDHIYVVGGFDGTAHLSSVEAYNIRTDSWTTVTSMTTPRCYVGATVL--RG-RLYAIAGYDGNSLLSSIECYDPIID 279 (301)
T ss_dssp -TTEEEEECCBCSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TT-EEEEECCBCSSSBEEEEEEEETTTT
T ss_pred -CCEEEEEeCCCCCcccceEEEEeCCCCcEEECCCCCCcccceeEEEE--CC-EEEEEcCcCCCcccccEEEEcCCCC
Confidence 33577888764 468999987621 111111111112222222 34 466677654 34677777653
No 327
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=95.64 E-value=1.4 Score=40.96 Aligned_cols=113 Identities=9% Similarity=0.115 Sum_probs=57.6
Q ss_pred CCceeEEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEec------CCCCeeeEEecCC---CCceEE
Q 014472 125 DGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRG------HSTEGYGLSWSKF---KEGHLL 195 (424)
Q Consensus 125 ~~~v~~i~~~p~~~~~latg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~------h~~~v~~l~~~~~---~~~~l~ 195 (424)
-.....|+|.|++. ++++-...+.|++++... +.......+.. .......|+|+|+ +..+.+
T Consensus 26 l~~P~~~a~~pdG~-l~V~e~~gg~I~~~~~~~--------g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv 96 (454)
T 1cru_A 26 LNKPHALLWGPDNQ-IWLTERATGKILRVNPES--------GSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYI 96 (454)
T ss_dssp CSSEEEEEECTTSC-EEEEETTTCEEEEECTTT--------CCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEE
T ss_pred CCCceEEEEcCCCc-EEEEEcCCCEEEEEECCC--------CcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEE
Confidence 45667999999996 666543334788887543 11111111111 2345779999995 442333
Q ss_pred EEeC------------CCcEEEEeCCCCCC-CCcccce-eeee-cCCcceeeEEeeCCCCcEEEEEe
Q 014472 196 SGSD------------DAQICLWDINAAPK-NKSLEAM-QIFK-VHEGVVEDVAWHLRHEYLFGSVG 247 (424)
Q Consensus 196 s~~~------------dg~i~vwd~~~~~~-~~~~~~~-~~~~-~~~~~v~~i~~~~~~~~~~~s~~ 247 (424)
+-+. ...|.-+++..... ....+.+ ..+. ........|+|.|++. |+++.+
T Consensus 97 ~~s~~~~~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~-Lyv~~G 162 (454)
T 1cru_A 97 SGTFKNPKSTDKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQK-IYYTIG 162 (454)
T ss_dssp EEEEECTTC--CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSC-EEEEEC
T ss_pred EEeccccCCCccccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCe-EEEEEC
Confidence 3322 13455555533211 0011111 1111 1123468899999996 555544
No 328
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=95.45 E-value=0.42 Score=41.58 Aligned_cols=144 Identities=12% Similarity=0.130 Sum_probs=67.3
Q ss_pred eEEEEeCCC-----cEEEEeCCCCCCCCcccceeeeecCCcceeeEEeeCCCCcEEEEEeCC-------CeEEEEECCCC
Q 014472 193 HLLSGSDDA-----QICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDD-------QYLLIWDLRTP 260 (424)
Q Consensus 193 ~l~s~~~dg-----~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~~s~~~d-------g~i~i~d~~~~ 260 (424)
+++.|+.++ .+.+||+.+.. +..+..+....... +++.. +..+++.|+.+ ..+.+||+.+.
T Consensus 111 iyv~GG~~~~~~~~~~~~~d~~~~~----W~~~~~~p~~r~~~-~~~~~--~~~iyv~GG~~~~~~~~~~~~~~yd~~~~ 183 (302)
T 2xn4_A 111 LYAVGGFDGSTGLSSVEAYNIKSNE----WFHVAPMNTRRSSV-GVGVV--GGLLYAVGGYDVASRQCLSTVECYNATTN 183 (302)
T ss_dssp EEEEEEECSSCEEEEEEEEETTTTE----EEEECCCSSCCBSC-EEEEE--TTEEEEECCEETTTTEECCCEEEEETTTT
T ss_pred EEEEcCCCCCccCceEEEEeCCCCe----EeecCCCCCcccCc-eEEEE--CCEEEEEeCCCCCCCccccEEEEEeCCCC
Confidence 666666543 47788876542 11121111111111 22222 33577676642 35889998875
Q ss_pred CCCCCeeEecccCCCeeEEEecCCCCeEEEEEeCC-----CcEEEEECCCCC-CcceeecCCCCCEEEEEEcCCCCcEEE
Q 014472 261 SVSKPVQSVVAHQSEVNCLAFNPFNEWILATGSTD-----KTVKLFDLRKIS-TALHTFDSHKEEVFQVGWNPKNETILA 334 (424)
Q Consensus 261 ~~~~~~~~~~~~~~~v~~i~~~~~~~~~l~~g~~d-----g~i~iwd~~~~~-~~~~~~~~~~~~v~~~~~sp~~~~~l~ 334 (424)
.- ..+..+........++.+ +..+++.|+.+ ..+.+||+.+.. ..+..+......-..+.+ ++ .+++
T Consensus 184 ~W-~~~~~~p~~r~~~~~~~~---~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~--~~-~i~v 256 (302)
T 2xn4_A 184 EW-TYIAEMSTRRSGAGVGVL---NNLLYAVGGHDGPLVRKSVEVYDPTTNAWRQVADMNMCRRNAGVCAV--NG-LLYV 256 (302)
T ss_dssp EE-EEECCCSSCCBSCEEEEE---TTEEEEECCBSSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TT-EEEE
T ss_pred cE-EECCCCccccccccEEEE---CCEEEEECCCCCCcccceEEEEeCCCCCEeeCCCCCCccccCeEEEE--CC-EEEE
Confidence 41 111111111112222333 33477888764 368899987621 111111111111122222 34 4677
Q ss_pred EEeCCC-----eEEEeeCCCC
Q 014472 335 SCCLGR-----RLMVWDLSRI 350 (424)
Q Consensus 335 s~~~dg-----~i~iwd~~~~ 350 (424)
.|+.++ .+.+||+.+.
T Consensus 257 ~GG~~~~~~~~~v~~yd~~~~ 277 (302)
T 2xn4_A 257 VGGDDGSCNLASVEYYNPTTD 277 (302)
T ss_dssp ECCBCSSSBCCCEEEEETTTT
T ss_pred ECCcCCCcccccEEEEcCCCC
Confidence 776553 3788888764
No 329
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=95.13 E-value=0.5 Score=41.17 Aligned_cols=187 Identities=8% Similarity=0.061 Sum_probs=87.3
Q ss_pred cEEEEEecC----CeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCCeeeEEecCCCCceEEEEeCC------CcEEEEeC
Q 014472 139 FLIATKTVS----AEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDD------AQICLWDI 208 (424)
Q Consensus 139 ~~latg~~d----g~v~iwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~d------g~i~vwd~ 208 (424)
.+++.|+.+ ..+.+||..+ ..+.....+.........+.+ +..+++.|+.+ ..+.+||+
T Consensus 57 ~lyv~GG~~~~~~~~~~~~d~~~--------~~W~~~~~~p~~r~~~~~~~~---~~~iyv~GG~~~~~~~~~~~~~~d~ 125 (306)
T 3ii7_A 57 VVYILGGSQLFPIKRMDCYNVVK--------DSWYSKLGPPTPRDSLAACAA---EGKIYTSGGSEVGNSALYLFECYDT 125 (306)
T ss_dssp EEEEECCBSSSBCCEEEEEETTT--------TEEEEEECCSSCCBSCEEEEE---TTEEEEECCBBTTBSCCCCEEEEET
T ss_pred EEEEEeCCCCCCcceEEEEeCCC--------CeEEECCCCCccccceeEEEE---CCEEEEECCCCCCCcEeeeEEEEeC
Confidence 477777754 6788888876 222222111111111112222 23366667654 45888888
Q ss_pred CCCCCCCcccceeeeecCCcceeeEEeeCCCCcEEEEEeC---------CCeEEEEECCCCCCCCCeeEecccCCCeeEE
Q 014472 209 NAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGD---------DQYLLIWDLRTPSVSKPVQSVVAHQSEVNCL 279 (424)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~~s~~~---------dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~i 279 (424)
.+.. +..+..+.........+. . + ..+++.|+. -..+.+||+.+..- ..+..+......-.++
T Consensus 126 ~~~~----W~~~~~~p~~r~~~~~~~-~-~-~~iyv~GG~~~~~~~~~~~~~~~~yd~~~~~W-~~~~~~p~~r~~~~~~ 197 (306)
T 3ii7_A 126 RTES----WHTKPSMLTQRCSHGMVE-A-N-GLIYVCGGSLGNNVSGRVLNSCEVYDPATETW-TELCPMIEARKNHGLV 197 (306)
T ss_dssp TTTE----EEEECCCSSCCBSCEEEE-E-T-TEEEEECCEESCTTTCEECCCEEEEETTTTEE-EEECCCSSCCBSCEEE
T ss_pred CCCc----eEeCCCCcCCcceeEEEE-E-C-CEEEEECCCCCCCCcccccceEEEeCCCCCeE-EECCCccchhhcceEE
Confidence 7642 111111111111111122 2 3 356666653 34588999987541 1111111111112222
Q ss_pred EecCCCCeEEEEEeCC-----CcEEEEECCCCC-CcceeecCCCCCEEEEEEcCCCCcEEEEEeCC-----CeEEEeeCC
Q 014472 280 AFNPFNEWILATGSTD-----KTVKLFDLRKIS-TALHTFDSHKEEVFQVGWNPKNETILASCCLG-----RRLMVWDLS 348 (424)
Q Consensus 280 ~~~~~~~~~l~~g~~d-----g~i~iwd~~~~~-~~~~~~~~~~~~v~~~~~sp~~~~~l~s~~~d-----g~i~iwd~~ 348 (424)
.+ +..+++.|+.+ ..+.+||+.+.. ..+..+.........+.+ ++ .+++.|+.+ ..+.+||+.
T Consensus 198 ~~---~~~i~v~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~-~i~v~GG~~~~~~~~~~~~yd~~ 271 (306)
T 3ii7_A 198 FV---KDKIFAVGGQNGLGGLDNVEYYDIKLNEWKMVSPMPWKGVTVKCAAV--GS-IVYVLAGFQGVGRLGHILEYNTE 271 (306)
T ss_dssp EE---TTEEEEECCEETTEEBCCEEEEETTTTEEEECCCCSCCBSCCEEEEE--TT-EEEEEECBCSSSBCCEEEEEETT
T ss_pred EE---CCEEEEEeCCCCCCCCceEEEeeCCCCcEEECCCCCCCccceeEEEE--CC-EEEEEeCcCCCeeeeeEEEEcCC
Confidence 22 33477777754 368899987621 111111111122223333 34 477777754 457888887
Q ss_pred CC
Q 014472 349 RI 350 (424)
Q Consensus 349 ~~ 350 (424)
+.
T Consensus 272 ~~ 273 (306)
T 3ii7_A 272 TD 273 (306)
T ss_dssp TT
T ss_pred CC
Confidence 64
No 330
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=94.77 E-value=2 Score=37.72 Aligned_cols=205 Identities=14% Similarity=0.148 Sum_probs=122.3
Q ss_pred ccCCceeEEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCC----CCeeeEEecCCCCceEEEEe
Q 014472 123 NHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHS----TEGYGLSWSKFKEGHLLSGS 198 (424)
Q Consensus 123 ~h~~~v~~i~~~p~~~~~latg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~h~----~~v~~l~~~~~~~~~l~s~~ 198 (424)
..+.+|.-=+|-.... |+.-+ +..|+-|++.. ...|...+..|. ..|..-.-+++.+-++++|-
T Consensus 104 ~~~e~VvfWkWis~~~--L~lVT-~taVyHWs~~~---------~s~P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI 171 (365)
T 2xzh_A 104 TMTDDVTFWKWISLNT--VALVT-DNAVYHWSMEG---------ESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGI 171 (365)
T ss_dssp ECSSCEEEEEECSSSE--EEEEE-SSEEEEEESST---------TCCCEEEEECCGGGTTCEEEEEEECTTSCEEEEEEE
T ss_pred ecCCccEEEEecCCCe--EEEEc-CCcEEEEcccC---------CCCCceeeecchhcccceEEEEEECCCCCEEEEEeE
Confidence 3456777777766554 44433 45899999875 134555555443 45666667777774444443
Q ss_pred ------CCCcEEEEeCCCCCCCCcccceeeeecCCcceeeEEee--CCCCcEEEEEeC---CCeEEEEECCCCC-CCCCe
Q 014472 199 ------DDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWH--LRHEYLFGSVGD---DQYLLIWDLRTPS-VSKPV 266 (424)
Q Consensus 199 ------~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~i~~~--~~~~~~~~s~~~---dg~i~i~d~~~~~-~~~~~ 266 (424)
-.|.+.+|.++.. ..+.+.+|......+... +....+|+.+.. .+.++|.++.... ...+.
T Consensus 172 ~~~~~~v~G~mQLYS~er~-------~sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhIiEi~~~~~~~~~f 244 (365)
T 2xzh_A 172 SAQQNRVVGAMQLYSVDRK-------VSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPF 244 (365)
T ss_dssp EEETTEEEEEEEEEETTTT-------EEEEECCSEEEEEEECCTTCSSCEEEEEEEEEETTEEEEEEEECSSCCTTCCCC
T ss_pred eccCCccceeEEEEeeccc-------ccceeeeeeeeeEEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCCCCCCCc
Confidence 2478899998754 345566776554444332 112235544433 2689999986541 11111
Q ss_pred e----E-e---cccCCCeeEEEecCCCCeEEEEEeCCCcEEEEECCCCCCcceeecCCCCCEEEEEEcCCCCcEEEEEeC
Q 014472 267 Q----S-V---VAHQSEVNCLAFNPFNEWILATGSTDKTVKLFDLRKISTALHTFDSHKEEVFQVGWNPKNETILASCCL 338 (424)
Q Consensus 267 ~----~-~---~~~~~~v~~i~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~s~~~ 338 (424)
. . + ....+-.-++..++.-. ++..-+.-|.|++||+.+ +.++..-+-....|...+-+..... +++...
T Consensus 245 ~kk~vdi~fppea~~DFPVamqvs~kyg-viyviTK~G~ihlyDleT-gt~i~~nrIS~d~iF~ta~~~~~~G-i~~Vnr 321 (365)
T 2xzh_A 245 PKKAVDVFFPPEAQNDFPVAMQISEKHD-VVFLITKYGYIHLYDLET-GTCIYMNRISGETIFVTAPHEATAG-IIGVNR 321 (365)
T ss_dssp CCEEEEECCCTTCTTCCEEEEEEETTTT-EEEEEETTSEEEEEETTT-CCEEEEEECCSSCEEEEEEEGGGTE-EEEEET
T ss_pred ccccceeeCCccccCCceEEEEecccCC-EEEEEeCCcEEEEEEccc-CcEEEEeccCCCceEEecccCCCCc-EEEEcC
Confidence 1 1 1 11234456777777666 677888999999999998 7777776666677766665544333 334456
Q ss_pred CCeEEEeeCCC
Q 014472 339 GRRLMVWDLSR 349 (424)
Q Consensus 339 dg~i~iwd~~~ 349 (424)
.|.|.--.++.
T Consensus 322 ~GqVl~v~v~~ 332 (365)
T 2xzh_A 322 KGQVLSVCVEE 332 (365)
T ss_dssp TCEEEEEEECT
T ss_pred CCEEEEEEECc
Confidence 77666555543
No 331
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=94.72 E-value=0.84 Score=40.75 Aligned_cols=32 Identities=6% Similarity=-0.132 Sum_probs=17.6
Q ss_pred CCCCcEEEEEeCCC------cEEEEecCCCCCCCCCCCC
Q 014472 384 PCEDWVISSVAEDN------ILQIWQMAENIYHDEDDLP 416 (424)
Q Consensus 384 ~~~~~~l~s~~~d~------~i~iw~~~~~~~~~~~~~~ 416 (424)
.+++ +++.||.++ .|.++++.++.+.....++
T Consensus 315 ~~~~-i~v~GG~~~~~~~~~~v~~l~~~~~~~~~~~~~~ 352 (357)
T 2uvk_A 315 WNNS-LLIIGGETAGGKAVTDSVLITVKDNKVTVQNLEH 352 (357)
T ss_dssp ETTE-EEEEEEECGGGCEEEEEEEEEC-CCSCEEEC---
T ss_pred eCCE-EEEEeeeCCCCCEeeeEEEEEEcCcEeEeeeccc
Confidence 3455 777777543 3555688888766555443
No 332
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=94.65 E-value=0.56 Score=40.94 Aligned_cols=143 Identities=10% Similarity=0.090 Sum_probs=66.6
Q ss_pred eEEEEeCC-----CcEEEEeCCCCCCCCcccceeeeecCCcceeeEEeeCCCCcEEEEEeCC-----CeEEEEECCCCCC
Q 014472 193 HLLSGSDD-----AQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDD-----QYLLIWDLRTPSV 262 (424)
Q Consensus 193 ~l~s~~~d-----g~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~~s~~~d-----g~i~i~d~~~~~~ 262 (424)
+++.|+.+ ..+.+||+.+..- ..+..+.........+.+ +..+++.|+.+ ..+.+||+.+..-
T Consensus 124 iyv~GG~~~~~~~~~~~~yd~~~~~W----~~~~~~p~~r~~~~~~~~---~~~iyv~GG~~~~~~~~~~~~yd~~~~~W 196 (308)
T 1zgk_A 124 IYAVGGSHGCIHHNSVERYEPERDEW----HLVAPMLTRRIGVGVAVL---NRLLYAVGGFDGTNRLNSAECYYPERNEW 196 (308)
T ss_dssp EEEECCEETTEECCCEEEEETTTTEE----EECCCCSSCCBSCEEEEE---TTEEEEECCBCSSCBCCCEEEEETTTTEE
T ss_pred EEEEcCCCCCcccccEEEECCCCCeE----eECCCCCccccceEEEEE---CCEEEEEeCCCCCCcCceEEEEeCCCCeE
Confidence 56666543 3578888875421 111111111111112222 34577777654 4588999876541
Q ss_pred CCCeeEecccCCCeeEEEecCCCCeEEEEEeCC-----CcEEEEECCCCC-CcceeecCCCCCEEEEEEcCCCCcEEEEE
Q 014472 263 SKPVQSVVAHQSEVNCLAFNPFNEWILATGSTD-----KTVKLFDLRKIS-TALHTFDSHKEEVFQVGWNPKNETILASC 336 (424)
Q Consensus 263 ~~~~~~~~~~~~~v~~i~~~~~~~~~l~~g~~d-----g~i~iwd~~~~~-~~~~~~~~~~~~v~~~~~sp~~~~~l~s~ 336 (424)
..+..+........++.+ +..+++.|+.+ ..+.+||+.+.. ..+..+.........+.. ++ .+++.|
T Consensus 197 -~~~~~~p~~r~~~~~~~~---~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~-~i~v~G 269 (308)
T 1zgk_A 197 -RMITAMNTIRSGAGVCVL---HNCIYAAGGYDGQDQLNSVERYDVETETWTFVAPMKHRRSALGITVH--QG-RIYVLG 269 (308)
T ss_dssp -EECCCCSSCCBSCEEEEE---TTEEEEECCBCSSSBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TT-EEEEEC
T ss_pred -eeCCCCCCccccceEEEE---CCEEEEEeCCCCCCccceEEEEeCCCCcEEECCCCCCCccceEEEEE--CC-EEEEEc
Confidence 111111111112223333 33477788764 468999987621 111111111111122222 33 466666
Q ss_pred eCC-----CeEEEeeCCC
Q 014472 337 CLG-----RRLMVWDLSR 349 (424)
Q Consensus 337 ~~d-----g~i~iwd~~~ 349 (424)
+.+ ..+.+||+.+
T Consensus 270 G~~~~~~~~~v~~yd~~~ 287 (308)
T 1zgk_A 270 GYDGHTFLDSVECYDPDT 287 (308)
T ss_dssp CBCSSCBCCEEEEEETTT
T ss_pred CcCCCcccceEEEEcCCC
Confidence 643 3466777765
No 333
>1sqj_A OXG-RCBH, oligoxyloglucan reducing-END-specific cellobiohydrolase; beta-propeller; 2.20A {Geotrichum SP} SCOP: b.69.13.1 b.69.13.1 PDB: 2ebs_A*
Probab=94.59 E-value=4.1 Score=40.88 Aligned_cols=157 Identities=11% Similarity=0.061 Sum_probs=78.4
Q ss_pred CCceeEEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEecC-------CCCeeeEEecCCCCceEEEE
Q 014472 125 DGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGH-------STEGYGLSWSKFKEGHLLSG 197 (424)
Q Consensus 125 ~~~v~~i~~~p~~~~~latg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~h-------~~~v~~l~~~~~~~~~l~s~ 197 (424)
.+.|.+|+++|.++..+.++...+.|...+=.. ..+.+ +..+ ...+.+|++.|...+.++.+
T Consensus 14 ~g~i~~i~~~p~~~~~~~a~~~~ggv~rS~DgG--------~tW~~---~~~~~~~~~~~~~~i~~ia~dp~~~~~i~~~ 82 (789)
T 1sqj_A 14 GGYITGIVAHPKTKDLLYARTDIGGAYRWDAGT--------SKWIP---LNDFIEAQDMNIMGTESIALDPNNPDRLYLA 82 (789)
T ss_dssp CSCEEEEEECSSSTTCEEEEESSSCEEEEETTT--------TEEEE---SCTTCCGGGGGGCSEEEEEEETTEEEEEEEE
T ss_pred CCcEEEEEECCCCCCEEEEEecCCCEEEecCCC--------CCeeE---CccCCCcccccCCceeEEEECCCCCCEEEEE
Confidence 468999999998766777777777766554222 11221 1111 24689999998655455555
Q ss_pred eCCCc----EEEEeCCCCCCCCcccceee-ee--c---CCcceeeEEeeCCCCcEEEEEeCCCeEEEEECCCCCCCCCee
Q 014472 198 SDDAQ----ICLWDINAAPKNKSLEAMQI-FK--V---HEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQ 267 (424)
Q Consensus 198 ~~dg~----i~vwd~~~~~~~~~~~~~~~-~~--~---~~~~v~~i~~~~~~~~~~~s~~~dg~i~i~d~~~~~~~~~~~ 267 (424)
..... -.||.-..+. ..++.+.. +. . ....+..++++|..+..+..+...+.|. .....++..+.+.
T Consensus 83 ~g~~~~~~~~~v~~S~DgG--~TW~~~~~~~~~~~~~~~~~~~~~iav~p~~~~~v~~g~~~~gl~-~S~DgG~TW~~~~ 159 (789)
T 1sqj_A 83 QGRYVGDEWAAFYVSEDRG--QSFTIYESPFPMGANDMGRNNGERLAVNPFNSNEVWMGTRTEGIW-KSSDRAKTWTNVT 159 (789)
T ss_dssp ECSCTTSSCCEEEEESSTT--SEEEEEECSSCCCTTSTTTTSCCCEEEETTEEEEEEEECSSSCEE-EESSTTSSCEEET
T ss_pred eCccCCCcccEEEEECCCC--CcceeccCCcccCccCCCccceeEEEEcCCCCCEEEEEeccCCEE-EECCCCcccCCCc
Confidence 43211 3344333221 22222211 00 0 0113567888886555555555344332 2222333222111
Q ss_pred Eec---ccCCCeeEEEecCCCCeEEEEEeCC
Q 014472 268 SVV---AHQSEVNCLAFNPFNEWILATGSTD 295 (424)
Q Consensus 268 ~~~---~~~~~v~~i~~~~~~~~~l~~g~~d 295 (424)
... .....+..|.++|.....++++..+
T Consensus 160 ~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~ 190 (789)
T 1sqj_A 160 SIPDAFTNGIGYTSVIFDPERNGTIYASATA 190 (789)
T ss_dssp TSCCCCSTTTCEEEEEECTTSTTCEEEEESS
T ss_pred cCccccCCCCCeEEEEECCCCCCEEEEEEcC
Confidence 100 1124578899998654345555544
No 334
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=94.17 E-value=3.3 Score=37.87 Aligned_cols=205 Identities=15% Similarity=0.144 Sum_probs=126.6
Q ss_pred ccCCceeEEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCC----CCeeeEEecCCCCceEEEEe
Q 014472 123 NHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHS----TEGYGLSWSKFKEGHLLSGS 198 (424)
Q Consensus 123 ~h~~~v~~i~~~p~~~~~latg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~h~----~~v~~l~~~~~~~~~l~s~~ 198 (424)
..+.+|.-=+|-... .|+.-+ +..|+-|++.. ...|...+..|. ..|..-.-+++.+-++++|-
T Consensus 103 ~~~e~VvfWkWis~~--~l~lVT-~taVyHWsi~~---------~s~P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI 170 (494)
T 1bpo_A 103 TMTDDVTFWKWISLN--TVALVT-DNAVYHWSMEG---------ESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGI 170 (494)
T ss_dssp ECSSCCCEEEEEETT--EEEEEC-SSEEEEEESSS---------SCCCEEEEECCGGGTTCEEEEEEECTTSSEEEEEEE
T ss_pred ecCCCceEEEecCCC--eEEEEc-CCeeEEecccC---------CCCchhheecchhcccceEEEEEECCCCCeEEEEee
Confidence 345566666776544 344433 56899999975 134555555443 45666677777774444443
Q ss_pred ------CCCcEEEEeCCCCCCCCcccceeeeecCCcceeeEEeeCC--CCcEEEEEeCC---CeEEEEECCCCC-CCCCe
Q 014472 199 ------DDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLR--HEYLFGSVGDD---QYLLIWDLRTPS-VSKPV 266 (424)
Q Consensus 199 ------~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~--~~~~~~s~~~d---g~i~i~d~~~~~-~~~~~ 266 (424)
-.|.+.+|.++.. ..+.+.+|......+..... ...+|+.+... +.++|.++.... ...+.
T Consensus 171 ~~~~~~v~G~mQLYS~er~-------~sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhi~Ei~~~~~~~~~f 243 (494)
T 1bpo_A 171 SAQQNRVVGAMQLYSVDRK-------VSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPF 243 (494)
T ss_dssp EEETTEEEEEEEEEESTTC-------CEEEECCSEEEEEEEECTTCSSEEEEEEEEECSTTCCEEEEEECSCCCTTCCCC
T ss_pred cccCCcccceEEEeecccc-------ccchheeeeeeeEEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCccCCCCc
Confidence 2478999998764 34556777666555544321 12456555443 789999996541 11111
Q ss_pred ----eEe----cccCCCeeEEEecCCCCeEEEEEeCCCcEEEEECCCCCCcceeecCCCCCEEEEEEcCCCCcEEEEEeC
Q 014472 267 ----QSV----VAHQSEVNCLAFNPFNEWILATGSTDKTVKLFDLRKISTALHTFDSHKEEVFQVGWNPKNETILASCCL 338 (424)
Q Consensus 267 ----~~~----~~~~~~v~~i~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~s~~~ 338 (424)
..+ ....+-..++..++.-. ++..-+.-|.|++||+.+ +.++..-+-....|...+-+..... +++...
T Consensus 244 ~kk~vdv~fppe~~~DFPvamqvs~kyg-viyviTK~G~i~lyDleT-gt~i~~nrIs~~~iF~t~~~~~~~G-i~~Vnr 320 (494)
T 1bpo_A 244 PKKAVDVFFPPEAQNDFPVAMQISEKHD-VVFLITKYGYIHLYDLET-GTCIYMNRISGETIFVTAPHEATAG-IIGVNR 320 (494)
T ss_dssp CCEEEECCCCTTSTTCCEEEEEEETTTT-EEEEEETTSEEEEEETTT-CCEEEEEECCSSCEEEEEEETTTTE-EEEEET
T ss_pred cceeeeeeCCcccccCceeEEEecccCC-EEEEEecCceEEEEeccc-ceeeeeecccCCceEEecccCCCCc-EEEEcc
Confidence 111 11234556788888776 677888999999999998 7777777766777777666655444 344457
Q ss_pred CCeEEEeeCCC
Q 014472 339 GRRLMVWDLSR 349 (424)
Q Consensus 339 dg~i~iwd~~~ 349 (424)
.|.|.--.++.
T Consensus 321 ~GqVl~v~v~e 331 (494)
T 1bpo_A 321 KGQVLSVCVEE 331 (494)
T ss_dssp TCEEEEEEECT
T ss_pred CceEEEEEEcc
Confidence 77766655544
No 335
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=94.11 E-value=2.7 Score=36.59 Aligned_cols=62 Identities=8% Similarity=0.199 Sum_probs=33.8
Q ss_pred CcEEEEEeC-C-----CeEEEEECCCCCCCCCeeEecccCCCeeEEEecCCCCeEEEEEeCCC-----cEEEEECCC
Q 014472 240 EYLFGSVGD-D-----QYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATGSTDK-----TVKLFDLRK 305 (424)
Q Consensus 240 ~~~~~s~~~-d-----g~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~l~~g~~dg-----~i~iwd~~~ 305 (424)
..+++.|+. + ..+.+||+.+..- ..+..+......-.++.+ ++ .+++.|+.++ .+.+||+.+
T Consensus 149 ~~iyv~GG~~~~~~~~~~~~~yd~~~~~W-~~~~~~p~~r~~~~~~~~--~~-~iyv~GG~~~~~~~~~~~~yd~~~ 221 (315)
T 4asc_A 149 DLVYVIGGKGSDRKCLNKMCVYDPKKFEW-KELAPMQTARSLFGATVH--DG-RIIVAAGVTDTGLTSSAEVYSITD 221 (315)
T ss_dssp TEEEEECCBCTTSCBCCCEEEEETTTTEE-EECCCCSSCCBSCEEEEE--TT-EEEEEEEECSSSEEEEEEEEETTT
T ss_pred CEEEEEeCCCCCCcccceEEEEeCCCCeE-EECCCCCCchhceEEEEE--CC-EEEEEeccCCCCccceEEEEECCC
Confidence 357777775 2 4688999887541 111111111111222333 23 4778887654 588899876
No 336
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=93.98 E-value=2.2 Score=35.07 Aligned_cols=114 Identities=9% Similarity=-0.005 Sum_probs=60.5
Q ss_pred CceeEEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCC--CCeeeEEecCCCCceEEEEeCCCcE
Q 014472 126 GEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHS--TEGYGLSWSKFKEGHLLSGSDDAQI 203 (424)
Q Consensus 126 ~~v~~i~~~p~~~~~latg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~h~--~~v~~l~~~~~~~~~l~s~~~dg~i 203 (424)
..+..++|+|++. +.|+ .+|.++-.+..+... ..+....+..+.. ..-.++.|.|++. |..+ .||.|
T Consensus 41 ~~~~~laf~P~G~-LYaV--~~G~Ly~~~~~t~~~-----~~W~~s~t~IG~~Gw~~F~a~~fD~~G~--LYav-~dG~i 109 (236)
T 1tl2_A 41 SNFKFLFLSPGGE-LYGV--LNDKIYKGTPPTHDN-----DNWMGRAKKIGNGGWNQFQFLFFDPNGY--LYAV-SKDKL 109 (236)
T ss_dssp TTCSEEEECTTSC-EEEE--ETTEEEEESCCCSTT-----CCHHHHCEEEECSCGGGCSEEEECTTSC--EEEE-ETTEE
T ss_pred ccceeEEECCCcc-EEEE--eCCeEEEECCCCCCc-----ccccccccEecccccccceEEEECCCCC--EEEe-CCCEE
Confidence 3677999999776 6666 677755544322100 0010111111110 1136788888776 4444 56998
Q ss_pred EEEeCCCCCCCCcccceeee-ecCCcceeeEEeeCCCCcEEEEEeCCCeEE
Q 014472 204 CLWDINAAPKNKSLEAMQIF-KVHEGVVEDVAWHLRHEYLFGSVGDDQYLL 253 (424)
Q Consensus 204 ~vwd~~~~~~~~~~~~~~~~-~~~~~~v~~i~~~~~~~~~~~s~~~dg~i~ 253 (424)
.-++.-+.....-+.....+ ..-=..+..|.+.|++. |.|+. |+.++
T Consensus 110 yr~~pP~~~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~-Lyav~--dg~ly 157 (236)
T 1tl2_A 110 YKASPPQSDTDNWIARATEVGSGGWSGFKFLFFHPNGY-LYAVH--GQQFY 157 (236)
T ss_dssp EEESCCCSTTCCHHHHSEEEECSSGGGEEEEEECTTSC-EEEEE--TTEEE
T ss_pred EEeCCCcCCCCceeccccEeccCCCCceEEEEECCCce-EEEEe--CCcEE
Confidence 87776443322211111111 11124678999999985 66544 78754
No 337
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=93.38 E-value=4 Score=36.22 Aligned_cols=226 Identities=15% Similarity=0.132 Sum_probs=107.7
Q ss_pred EecCCCCeeeEEecCCCCceEEEEeCCCcEEEEeCCCCCCCCcccce-eeeecCCcceeeEEeeCC---CCcEEEEEe--
Q 014472 174 LRGHSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAM-QIFKVHEGVVEDVAWHLR---HEYLFGSVG-- 247 (424)
Q Consensus 174 ~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~-~~~~~~~~~v~~i~~~~~---~~~~~~s~~-- 247 (424)
+...-...+.|+|.|++. ++++--..|.|++++...+.. ..+..+ ..+.........|+++|+ +..++++-+
T Consensus 27 va~gL~~P~~ia~~pdG~-llVter~~G~I~~v~~~~g~~-~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~ 104 (347)
T 3das_A 27 VATGLNSPWGLAPLPGGD-LLVSSRDEATITRVDAKTGRK-TELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTSA 104 (347)
T ss_dssp EECCCSSEEEEEECTTSC-EEEEETTTCEEEEECTTTCCE-EEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEECS
T ss_pred eecCCCCceEEEEcCCCc-EEEEEecCCEEEEEECCCCcE-eeecccCceeecCCCCceeeEeccccccCCEEEEEEecC
Confidence 333445678999999886 455544489999998654321 111000 112223567889999995 445655422
Q ss_pred CCCeEEEEECCCCC-----CCCC--ee-Eec-ccCCCeeEEEecCCCCeEEEEEeC-------------CCcEEEEECCC
Q 014472 248 DDQYLLIWDLRTPS-----VSKP--VQ-SVV-AHQSEVNCLAFNPFNEWILATGST-------------DKTVKLFDLRK 305 (424)
Q Consensus 248 ~dg~i~i~d~~~~~-----~~~~--~~-~~~-~~~~~v~~i~~~~~~~~~l~~g~~-------------dg~i~iwd~~~ 305 (424)
.+..|.-|.+.... .... +. .+. ........|+|.|+|. |.++.+. .|.|.-++...
T Consensus 105 ~~~~v~R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG~-Lyvt~Gd~~~~~~~qd~~~~~G~IlRi~~dG 183 (347)
T 3das_A 105 SDNRIVRMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDKM-LYAGTGESGDTGLSQDRKSLGGKILRMTPDG 183 (347)
T ss_dssp SSEEEEEEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTSC-EEEECBCTTCGGGTTCTTCSTTCEEEECTTS
T ss_pred CCCEEEEEEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCCCC-EEEEECCCCCCccccCCCCCCCEEEEEeCCC
Confidence 44556666665421 1111 11 121 1122456799999997 4555332 24444444432
Q ss_pred C---CCc---ceeec-CCCCCEEEEEEcCCCCcEEEEE-eCCCeEEEeeCCCCCcccCCC--c--cCCCCCeeeEEEcCC
Q 014472 306 I---STA---LHTFD-SHKEEVFQVGWNPKNETILASC-CLGRRLMVWDLSRIDEEQTPE--D--AEDGPPELLFIHGGH 373 (424)
Q Consensus 306 ~---~~~---~~~~~-~~~~~v~~~~~sp~~~~~l~s~-~~dg~i~iwd~~~~~~~~~~~--~--~~~~~~~~~~~~~~h 373 (424)
. ..+ ...+. +|. ....++|+|++. ++++- +.|+.=.|--+..+..---.. . ....-...+..+..+
T Consensus 184 ~ip~~nPf~~~~i~a~G~R-Np~Gla~dp~G~-L~~~d~g~~~~deln~i~~G~nyGwP~~~g~~~~~~~~~P~~~~~~~ 261 (347)
T 3das_A 184 EPAPGNPFPGSPVYSYGHR-NVQGLAWDDKQR-LFASEFGQDTWDELNAIKPGDNYGWPEAEGKGGGSGFHDPVAQWSTD 261 (347)
T ss_dssp SBCTTCSSTTCCEEEBCCS-BCCEEEECTTCC-EEEEECCSSSCEEEEEECTTCBCCTTTCCSSCCCTTCCCCSEEECTT
T ss_pred CccCCCCCCCCeEEeeCCC-CcceEEECCCCC-EEEEecCCCCCceeeEEcCCCEecCCcccCCCCCccccCCcEecCCC
Confidence 1 000 11121 333 456899999875 44332 333323333333322110000 0 000111223333333
Q ss_pred CCCcceEEeCCCCCcEEEEEeCCCcEEEEecCC
Q 014472 374 TSKISDFSWNPCEDWVISSVAEDNILQIWQMAE 406 (424)
Q Consensus 374 ~~~v~~~~~~~~~~~~l~s~~~d~~i~iw~~~~ 406 (424)
......++|.. +. +++..-..+.|....+..
T Consensus 262 ~~ap~G~~~~~-g~-~~~~~l~~~~l~~v~~~~ 292 (347)
T 3das_A 262 EASPSGIAYAE-GS-VWMAGLRGERLWRIPLKG 292 (347)
T ss_dssp TCCEEEEEEET-TE-EEEEESTTCSEEEEEEET
T ss_pred CCCCcceEEEc-Cc-eeeccccCCEEEEEEecC
Confidence 23456677753 44 455544555555555543
No 338
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=92.89 E-value=4.4 Score=35.24 Aligned_cols=103 Identities=7% Similarity=0.064 Sum_probs=56.3
Q ss_pred EeeCCCCcEEEEE---eCCCeEEEEECCCCCCCCCeeEecccCCCeeEEEecCCCCeEEEEEeCCCcEEEEECCCCCCcc
Q 014472 234 AWHLRHEYLFGSV---GDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATGSTDKTVKLFDLRKISTAL 310 (424)
Q Consensus 234 ~~~~~~~~~~~s~---~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~ 310 (424)
.|++++..++.+- .....|...++.... ...+..+.. .++++.++.+..+......|.+.++.. +...
T Consensus 110 ~~s~~g~~Iy~~~~~~~~~~~Iy~~~~dGs~----~~~lt~~~~----~~~~~~g~~iy~t~~g~~~Iy~~~l~g-~~~~ 180 (302)
T 3s25_A 110 YASLIGNYIYYLHYDTQTATSLYRIRIDGEE----KKKIKNHYL----FTCNTSDRYFYYNNPKNGQLYRYDTAS-QSEA 180 (302)
T ss_dssp EEEEETTEEEEEEESSSSCEEEEEEETTSCC----CEEEESSCC----CCSEEETTEEEEECTTTCCEEEEETTT-TEEE
T ss_pred EEEEeCCEEEEEeecCCCCceEEEEECCCCC----eEEEeCCCc----eEeeEECCEEEEEeCCCceEEEEECCC-CCEE
Confidence 5677887776554 234556666665433 233333322 456778887666655567888888875 3322
Q ss_pred eeecCCCCCEEEEEEcCCCCcEEEEEeCCC-eEEEeeCCC
Q 014472 311 HTFDSHKEEVFQVGWNPKNETILASCCLGR-RLMVWDLSR 349 (424)
Q Consensus 311 ~~~~~~~~~v~~~~~sp~~~~~l~s~~~dg-~i~iwd~~~ 349 (424)
..+. +... ..++|++..++.+...++ .|..-++..
T Consensus 181 ~l~~---~~~~-~~~~P~g~~iy~t~~~~~~~I~~~~ldG 216 (302)
T 3s25_A 181 LFYD---CNCY-KPVVLDDTNVYYMDVNRDNAIVHVNINN 216 (302)
T ss_dssp EEEC---SCEE-EEEEEETTEEEEEEGGGTTEEEEECSSS
T ss_pred EEeC---CCcc-ceeeecCCEEEEEEcCCCcEEEEEECCC
Confidence 2222 2222 345688876555543333 444444443
No 339
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=92.88 E-value=5.2 Score=36.12 Aligned_cols=158 Identities=8% Similarity=-0.038 Sum_probs=71.5
Q ss_pred CCeeeEEecCCCCceEEEEeCCCcEEEEeCCCCCCCCcccceee-eec---------CCcceeeEEeeCCCCcEEEEEeC
Q 014472 179 TEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQI-FKV---------HEGVVEDVAWHLRHEYLFGSVGD 248 (424)
Q Consensus 179 ~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~-~~~---------~~~~v~~i~~~~~~~~~~~s~~~ 248 (424)
..+.+|.+.|...+.|..+..++.|...+ .+. ..+..+.. ... ....+.+|.++|.....+..+..
T Consensus 177 ~~i~~i~~d~~~~~~l~vg~~~ggl~~s~--DgG--~tW~~~~~~~~~~~~p~~~~~~g~~~~~i~~~~~~~~~l~vg~~ 252 (394)
T 3b7f_A 177 PKMHSILVDPRDPKHLYIGMSSGGVFEST--DAG--TDWKPLNRGCAANFLPDPNVEFGHDPHCVVQHPAAPDILYQQNH 252 (394)
T ss_dssp CEEEEEEECTTCTTCEEEEEETBEEEEES--STT--SSCEECCTTCCCTTSSSSSSSSCBCEEEEEECSSSTTEEEEEET
T ss_pred CceeEEEECCCCCCEEEEEECCCCEEEEC--CCC--CCceECCCCccccccCCCccccCcceeEEEECCCCCCEEEEEcC
Confidence 35788999885444466555444443332 221 11111110 000 01358889999875444445554
Q ss_pred CCeEEEEECCCCCCCCCeeEecccC---CCeeEEEecCCCCeEEEEEeC-----------CCcEEEEECCCCCCcceeec
Q 014472 249 DQYLLIWDLRTPSVSKPVQSVVAHQ---SEVNCLAFNPFNEWILATGST-----------DKTVKLFDLRKISTALHTFD 314 (424)
Q Consensus 249 dg~i~i~d~~~~~~~~~~~~~~~~~---~~v~~i~~~~~~~~~l~~g~~-----------dg~i~iwd~~~~~~~~~~~~ 314 (424)
.+ |...+-. +.....+.. .... ..+.+++++|..+..|.++.. ++...+|.....+.....+.
T Consensus 253 ~g-l~~s~D~-G~tW~~~~~-~l~~~~~~~~~~i~~~p~~~~~l~~~t~~~~~~w~~~~~~~~~~~~~S~DgG~tW~~~~ 329 (394)
T 3b7f_A 253 CG-IYRMDRR-EGVWKRIGD-AMPREVGDIGFPIVVHQRDPRTVWVFPMDGSDVWPRVSPGGKPAVYVTRDAGESWQRQD 329 (394)
T ss_dssp TE-EEEEETT-TTEEECGGG-GSCTTTCSCEEEEEECSSCTTCEEEEECBCCSSTTCCBCCSSCCEEEESSTTSCCEEEC
T ss_pred Ce-EEEeCCC-CCcceECCC-CCCCCCccceEEEEECCCCCCEEEEEeccCCccceeecCCCceeEEEECCCCCCceECC
Confidence 44 4444322 221111110 0011 345778888744333444432 33355665554333333322
Q ss_pred C--CC-C-----CEEEEEEcCCCCcEEEEEeCCCeEE
Q 014472 315 S--HK-E-----EVFQVGWNPKNETILASCCLGRRLM 343 (424)
Q Consensus 315 ~--~~-~-----~v~~~~~sp~~~~~l~s~~~dg~i~ 343 (424)
. .. . ....++++|..+..|+.++.++.|.
T Consensus 330 ~glp~~~~~~~~~~~~~~~~p~~~~~l~~g~~~g~l~ 366 (394)
T 3b7f_A 330 RGLPTDQAWLTVKRQAMTADAHAPVGVYFGTTGGEIW 366 (394)
T ss_dssp BTSCCSSCCCCCCTBSEEECCSSSCCEEEECTTSCEE
T ss_pred CCCCCccccceEEEEEEEECCCCCCEEEEEeCCCeEE
Confidence 1 11 0 1135788876433355565555443
No 340
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=92.71 E-value=8.7 Score=38.23 Aligned_cols=197 Identities=12% Similarity=0.057 Sum_probs=102.7
Q ss_pred ceeEEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEec----CCCCeeeEEecCCCCceEEEEeCCCc
Q 014472 127 EVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRG----HSTEGYGLSWSKFKEGHLLSGSDDAQ 202 (424)
Q Consensus 127 ~v~~i~~~p~~~~~latg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~----h~~~v~~l~~~~~~~~~l~s~~~dg~ 202 (424)
.|.++.-.+++... .|+ ++-+..|+..+ ........... ....|.++.-.+++ .|-.|+..+-
T Consensus 374 ~v~~i~~d~~g~lW--igt-~~GL~~~~~~~--------~~~~~~~~~~~~~~~~~~~v~~i~~d~~g--~lWigT~~~G 440 (758)
T 3ott_A 374 RIRHIYEDKEQQLW--IAT-DGSINRYDYAT--------RQFIHYNIVDNTGTYNTNWTYYIFEDTAG--QLWISTCLGG 440 (758)
T ss_dssp CEEEEEECTTSCEE--EEE-TTEEEEEETTT--------TEEEEEEEECCC--CBSSSEEEEEECTTS--EEEEEESSSC
T ss_pred ceEEEEECCCCCEE--EEe-CCcHhhcCcCC--------CcEEEeecCCCcCCCCCceEEEEEEcCCC--CEEEEECCCc
Confidence 47777777767533 344 35688888765 11111100000 12347777765544 4666777667
Q ss_pred EEEEeCCCCC--CCCcccceeee---ec-CCcceeeEEeeCCCCcEEEEEeCCCeEEEEECCCCCCCCCeeEecc----c
Q 014472 203 ICLWDINAAP--KNKSLEAMQIF---KV-HEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVA----H 272 (424)
Q Consensus 203 i~vwd~~~~~--~~~~~~~~~~~---~~-~~~~v~~i~~~~~~~~~~~s~~~dg~i~i~d~~~~~~~~~~~~~~~----~ 272 (424)
|.++|..+.. ....+.....+ .+ ....|.++...+++. +.+.++..+-|..+|.++.. +..+.. .
T Consensus 441 l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~-lWi~~~t~~Gl~~~d~~~~~----~~~~~~~~~~~ 515 (758)
T 3ott_A 441 IFVVDKHKLMQSTSGQYIAEQNYSVHNGLSGMFINQIIPDNEGN-VWVLLYNNKGIDKINPRTRE----VTKLFADELTG 515 (758)
T ss_dssp EEEEEHHHHHHCCSSEEECSEEECGGGTCSCSCEEEEEECTTSC-EEEEETTCSSEEEEETTTTE----EEEECTTTSCG
T ss_pred eEEEccccccccCCcceecccccccccccccceeeeEEEcCCCC-EEEEccCCCCcEEEeCCCCc----eEEecCCCcCC
Confidence 8888854210 00001000011 11 123588888888775 55433334558888987643 222211 1
Q ss_pred CCCeeEEEecCCCCeEEEEEeCCCcEEEEECCCCCCcceeec---CCCCCEEEEEEcCCCCcEEEEEeCCCeEEEeeCCC
Q 014472 273 QSEVNCLAFNPFNEWILATGSTDKTVKLFDLRKISTALHTFD---SHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSR 349 (424)
Q Consensus 273 ~~~v~~i~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~---~~~~~v~~~~~sp~~~~~l~s~~~dg~i~iwd~~~ 349 (424)
...+.++....+|. |..|+..| +..||..+. . ...+. .....|.++... ++ . |-.++..| |..+|..+
T Consensus 516 ~~~~~~i~~d~~g~--lWigt~~G-l~~~~~~~~-~-~~~~~~~gl~~~~i~~i~~~-~g-~-lWi~t~~G-l~~~~~~~ 586 (758)
T 3ott_A 516 EKSPNYLLCDEDGL--LWVGFHGG-VMRINPKDE-S-QQSISFGSFSNNEILSMTCV-KN-S-IWVSTTNG-LWIIDRKT 586 (758)
T ss_dssp GGCEEEEEECTTSC--EEEEETTE-EEEECC--C-C-CCBCCCCC---CCEEEEEEE-TT-E-EEEEESSC-EEEEETTT
T ss_pred CcccceEEECCCCC--EEEEecCc-eEEEecCCC-c-eEEecccCCCccceEEEEEC-CC-C-EEEECCCC-eEEEcCCC
Confidence 24578888888776 44555554 888887652 2 22221 123467787764 55 3 44445666 77788775
Q ss_pred C
Q 014472 350 I 350 (424)
Q Consensus 350 ~ 350 (424)
.
T Consensus 587 ~ 587 (758)
T 3ott_A 587 M 587 (758)
T ss_dssp C
T ss_pred c
Confidence 3
No 341
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=92.70 E-value=5.4 Score=35.85 Aligned_cols=157 Identities=7% Similarity=0.076 Sum_probs=83.4
Q ss_pred CcceeeEEee---CC----CCcEEEEEeCCCeEEEEECCCCCCCCCee---------Ee--cc----cCCCeeEEEecCC
Q 014472 227 EGVVEDVAWH---LR----HEYLFGSVGDDQYLLIWDLRTPSVSKPVQ---------SV--VA----HQSEVNCLAFNPF 284 (424)
Q Consensus 227 ~~~v~~i~~~---~~----~~~~~~s~~~dg~i~i~d~~~~~~~~~~~---------~~--~~----~~~~v~~i~~~~~ 284 (424)
.+.+.++++. |. +.+.+++=...+.|.|+|+.+++..+... .+ .+ -...+..|+.+|+
T Consensus 151 ~S~l~di~VD~~~~~~~c~~~~aYItD~~~~gLIVydl~~~~swRv~~~~~~pd~~~~~~i~G~~~~~~~Gi~gIaLsp~ 230 (381)
T 3q6k_A 151 PTYFGGFAVDVANPKGDCSETFVYITNFLRGALFIYDHKKQDSWNVTHPTFKAERPTKFDYGGKEYEFKAGIFGITLGDR 230 (381)
T ss_dssp GGGEEEEEEEESCTTTTSCSEEEEEEETTTTEEEEEETTTTEEEEEECGGGSCCSCEEEEETTEEEEECCCEEEEEECCC
T ss_pred CCccceEEEecccCCCCCCccEEEEEcCCCCcEEEEECCCCcEEEEccCCCccccCcceEECCEEeEeccCceEEEecCC
Confidence 4567888887 22 33455555567889999999865422111 00 01 1247888999997
Q ss_pred ----CCeEEEEEeCCCcEEEEE---CCCC--CCcceeecCC--CCCEEEEEEc-CCCCcEEEEEeCCCeEEEeeCCC-CC
Q 014472 285 ----NEWILATGSTDKTVKLFD---LRKI--STALHTFDSH--KEEVFQVGWN-PKNETILASCCLGRRLMVWDLSR-ID 351 (424)
Q Consensus 285 ----~~~~l~~g~~dg~i~iwd---~~~~--~~~~~~~~~~--~~~v~~~~~s-p~~~~~l~s~~~dg~i~iwd~~~-~~ 351 (424)
++.+.........+.-.. ++.. ...+..+-.. ...-..++.. .+| .++++--....|..|+... .-
T Consensus 231 ~~~~~~~LYf~plss~~ly~V~T~~L~~~~~~~~v~~~G~kg~~s~~~~~~~D~~~G-~ly~~~~~~~aI~~w~~~~~~~ 309 (381)
T 3q6k_A 231 DSEGNRPAYYLAGSAIKVYSVNTKELKQKGGKLNPELLGNRGKYNDAIALAYDPKTK-VIFFAEANTKQVSCWNTQKMPL 309 (381)
T ss_dssp CTTSCCEEEEEESSCSEEEEEEHHHHSSTTCCCCCEEEEECCTTCCEEEEEECTTTC-EEEEEESSSSEEEEEETTSCSB
T ss_pred cCCCCeEEEEEECCCCcEEEEEHHHhhCcchhhceEEeeecCCCCCcceEEEeCCCC-eEEEEeccCCeEEEEeCCCCcc
Confidence 665555544433333333 2221 1122222111 1334456776 455 5777777788899999875 11
Q ss_pred cccCCCccCCCCCeeeEEEcCCCCCcceEEeCCCCCcEEEEEe
Q 014472 352 EEQTPEDAEDGPPELLFIHGGHTSKISDFSWNPCEDWVISSVA 394 (424)
Q Consensus 352 ~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~ 394 (424)
... ....+. ....-..+.++.+.+++. +.+..+
T Consensus 310 ~~~--------n~~~l~-~d~~l~~pd~~~i~~~g~-Lwv~sn 342 (381)
T 3q6k_A 310 RMK--------NTDVVY-TSSRFVFGTDISVDSKGG-LWFMSN 342 (381)
T ss_dssp CGG--------GEEEEE-ECTTCCSEEEEEECTTSC-EEEEEC
T ss_pred ccC--------ceEEEE-ECCCccccCeEEECCCCe-EEEEEC
Confidence 000 002222 222334567777777776 555544
No 342
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=92.68 E-value=4.7 Score=35.08 Aligned_cols=62 Identities=16% Similarity=0.268 Sum_probs=32.3
Q ss_pred CcEEEEEeC------CCeEEEEECCCCCCCCCeeEecccCCCeeEEEecCCCCeEEEEEeCC-----CcEEEEECCC
Q 014472 240 EYLFGSVGD------DQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATGSTD-----KTVKLFDLRK 305 (424)
Q Consensus 240 ~~~~~s~~~------dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~l~~g~~d-----g~i~iwd~~~ 305 (424)
..+++.|+. -..+.+||+.+..- ..+..+........++.+ ++ .+++.|+.+ ..+.+||+.+
T Consensus 159 ~~iyv~GG~~~~~~~~~~~~~yd~~~~~W-~~~~~~p~~r~~~~~~~~--~~-~iyv~GG~~~~~~~~~~~~yd~~~ 231 (318)
T 2woz_A 159 GMIYCLGGKTDDKKCTNRVFIYNPKKGDW-KDLAPMKTPRSMFGVAIH--KG-KIVIAGGVTEDGLSASVEAFDLKT 231 (318)
T ss_dssp TEEEEECCEESSSCBCCCEEEEETTTTEE-EEECCCSSCCBSCEEEEE--TT-EEEEEEEEETTEEEEEEEEEETTT
T ss_pred CEEEEEcCCCCCCCccceEEEEcCCCCEE-EECCCCCCCcccceEEEE--CC-EEEEEcCcCCCCccceEEEEECCC
Confidence 356667764 23588999987541 111111111111222233 23 477777754 3577899876
No 343
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=92.48 E-value=5.9 Score=35.76 Aligned_cols=148 Identities=12% Similarity=0.082 Sum_probs=68.3
Q ss_pred CeeeEEecCCC-CceEEEEeCCCcEEEEeCCCCCCCCcccceeeee----------------cCCcceeeEEeeCCC-Cc
Q 014472 180 EGYGLSWSKFK-EGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFK----------------VHEGVVEDVAWHLRH-EY 241 (424)
Q Consensus 180 ~v~~l~~~~~~-~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~----------------~~~~~v~~i~~~~~~-~~ 241 (424)
.|.+|++.|.+ .+.|.++...+.|...+ .+. ..++.+.... .....+.+|.++|.. ..
T Consensus 116 ~i~~l~~~~~~~~~~l~~g~~~ggl~~S~--DgG--~tW~~~~~~~~~p~~~~~~~~~~~g~~~~~~i~~i~~d~~~~~~ 191 (394)
T 3b7f_A 116 HVFWLTPGHASEPGTWYAGTSPQGLFRST--DHG--ASWEPVAGFNDHPMRRAWTGGEQDGTPDGPKMHSILVDPRDPKH 191 (394)
T ss_dssp EEEEEEECCTTSTTCEEEEEETTEEEEES--STT--SBCEECHHHHTCTTHHHHHCCC----CCCCEEEEEEECTTCTTC
T ss_pred ceeEEEeCCCCCCCEEEEEecCCcEEEEc--CCC--CCeEECcCccCCccccccccccccCCCCCCceeEEEECCCCCCE
Confidence 57788888743 34566666666554442 221 1222111110 122457889998853 34
Q ss_pred EEEEEeCCCeEEEEECCCCCCCCCeeE-ecc-c--------CCCeeEEEecCCCCeEEEEEeCCCcEEEEECCCCCCcce
Q 014472 242 LFGSVGDDQYLLIWDLRTPSVSKPVQS-VVA-H--------QSEVNCLAFNPFNEWILATGSTDKTVKLFDLRKISTALH 311 (424)
Q Consensus 242 ~~~s~~~dg~i~i~d~~~~~~~~~~~~-~~~-~--------~~~v~~i~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~ 311 (424)
++ .+..++.|...+- .++....+.. ... + ...+.+|+++|.+...|.++...+ |...+-. +....
T Consensus 192 l~-vg~~~ggl~~s~D-gG~tW~~~~~~~~~~~~p~~~~~~g~~~~~i~~~~~~~~~l~vg~~~g-l~~s~D~--G~tW~ 266 (394)
T 3b7f_A 192 LY-IGMSSGGVFESTD-AGTDWKPLNRGCAANFLPDPNVEFGHDPHCVVQHPAAPDILYQQNHCG-IYRMDRR--EGVWK 266 (394)
T ss_dssp EE-EEEETBEEEEESS-TTSSCEECCTTCCCTTSSSSSSSSCBCEEEEEECSSSTTEEEEEETTE-EEEEETT--TTEEE
T ss_pred EE-EEECCCCEEEECC-CCCCceECCCCccccccCCCccccCcceeEEEECCCCCCEEEEEcCCe-EEEeCCC--CCcce
Confidence 55 4443444443322 2221111100 000 0 124889999997443566666544 4443321 22222
Q ss_pred eec--CCC---CCEEEEEEcCCCCcEEEEE
Q 014472 312 TFD--SHK---EEVFQVGWNPKNETILASC 336 (424)
Q Consensus 312 ~~~--~~~---~~v~~~~~sp~~~~~l~s~ 336 (424)
.+. ... ..+..+.++|..+..|.++
T Consensus 267 ~~~~~l~~~~~~~~~~i~~~p~~~~~l~~~ 296 (394)
T 3b7f_A 267 RIGDAMPREVGDIGFPIVVHQRDPRTVWVF 296 (394)
T ss_dssp CGGGGSCTTTCSCEEEEEECSSCTTCEEEE
T ss_pred ECCCCCCCCCccceEEEEECCCCCCEEEEE
Confidence 221 111 3467788887443334444
No 344
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=91.80 E-value=3 Score=41.18 Aligned_cols=150 Identities=11% Similarity=0.069 Sum_probs=73.3
Q ss_pred eEEEEeCC------CcEEEEeCCCCCCCCcccceeeeecCCcceeeEEeeCCCCcEEEEEeCCC--eEEEEECCCCCCCC
Q 014472 193 HLLSGSDD------AQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQ--YLLIWDLRTPSVSK 264 (424)
Q Consensus 193 ~l~s~~~d------g~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~~s~~~dg--~i~i~d~~~~~~~~ 264 (424)
+++.|+.+ ..+.+||+.+.. +..+..+......- +++...++ .+++.|+.++ .+.+||+.+..- .
T Consensus 454 lyv~GG~~~~~~~~~dv~~yd~~t~~----W~~~~~~p~~R~~h-~~~~~~~~-~iyv~GG~~~~~~v~~yd~~t~~W-~ 526 (695)
T 2zwa_A 454 LLLIGGRKAPHQGLSDNWIFDMKTRE----WSMIKSLSHTRFRH-SACSLPDG-NVLILGGVTEGPAMLLYNVTEEIF-K 526 (695)
T ss_dssp EEEECCBSSTTCBCCCCEEEETTTTE----EEECCCCSBCCBSC-EEEECTTS-CEEEECCBCSSCSEEEEETTTTEE-E
T ss_pred EEEEcCCCCCCCccccEEEEeCCCCc----EEECCCCCCCcccc-eEEEEcCC-EEEEECCCCCCCCEEEEECCCCce-E
Confidence 66666643 247788887642 11111111111111 22221234 5777877654 689999987542 1
Q ss_pred CeeE---ecccCCCeeEEEecCCCCeEEEEEeC--C-----CcEEEEECCCCCC--c--ceeec----CCCCCEEEEEEc
Q 014472 265 PVQS---VVAHQSEVNCLAFNPFNEWILATGST--D-----KTVKLFDLRKIST--A--LHTFD----SHKEEVFQVGWN 326 (424)
Q Consensus 265 ~~~~---~~~~~~~v~~i~~~~~~~~~l~~g~~--d-----g~i~iwd~~~~~~--~--~~~~~----~~~~~v~~~~~s 326 (424)
.+.. .........++.+......+++.|+. + ..+.+||+.+..- . ...+. .....-..+.+
T Consensus 527 ~~~~~g~~p~~r~~~~a~v~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~~p~~~R~~~~~~~~- 605 (695)
T 2zwa_A 527 DVTPKDEFFQNSLVSAGLEFDPVSKQGIILGGGFMDQTTVSDKAIIFKYDAENATEPITVIKKLQHPLFQRYGSQIKYI- 605 (695)
T ss_dssp ECCCSSGGGGSCCBSCEEEEETTTTEEEEECCBCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEECGGGCCBSCEEEEE-
T ss_pred EccCCCCCCCcccceeEEEEeCCCCEEEEECCcCCCCCeeeCcEEEEEccCCccccceEEEEcCCCCCCCcccceEEEe-
Confidence 1111 11122233445666553457778875 2 3588999887330 0 11111 11112222222
Q ss_pred CCCCcEEEEEeC--------CCeEEEeeCCCCC
Q 014472 327 PKNETILASCCL--------GRRLMVWDLSRID 351 (424)
Q Consensus 327 p~~~~~l~s~~~--------dg~i~iwd~~~~~ 351 (424)
.++ .+++.|+. ...+.+||+.+..
T Consensus 606 ~~~-~iyv~GG~~~~~~~~~~~~v~~yd~~t~~ 637 (695)
T 2zwa_A 606 TPR-KLLIVGGTSPSGLFDRTNSIISLDPLSET 637 (695)
T ss_dssp ETT-EEEEECCBCSSCCCCTTTSEEEEETTTTE
T ss_pred CCC-EEEEECCccCCCCCCCCCeEEEEECCCCe
Confidence 224 46667764 2458888887643
No 345
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=91.40 E-value=12 Score=37.14 Aligned_cols=232 Identities=11% Similarity=0.036 Sum_probs=125.5
Q ss_pred CCceeEEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCCeeeEEecCCCCceEEEEeCCCcEE
Q 014472 125 DGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDDAQIC 204 (424)
Q Consensus 125 ~~~v~~i~~~p~~~~~latg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~ 204 (424)
...|++|.-..+|. |-.|+.+| +..||-..... ..... ......|.++.-..++ .|-.|+.+| +.
T Consensus 21 ~n~V~~I~qD~~G~--lWigT~~G-L~ryDG~~~~~-------~~~~~--~~~~~~i~~i~~d~~g--~lWigT~~G-l~ 85 (758)
T 3ott_A 21 ASVVSCFLQDSEGL--IWIGSNKG-LFSYDGYSTQQ-------HFTYG--ENNNTRIYCGVIIDNT--YLYMGTDNG-IL 85 (758)
T ss_dssp CCCEEEEEECTTSC--EEEEESSC-EEEECSSCEEE-------CSCTT--STTSSCEEEEEEETTT--EEEEEETTE-EE
T ss_pred cceEEEEEECCCCC--EEEEECCC-ccccCCCceEE-------EEccC--CCCCceEEEEEEcCCC--cEEEEeCCC-eE
Confidence 45788888887775 44455666 55677432000 00000 0123457777665544 466677665 78
Q ss_pred EEeCCCCCCCCcccceeeeecCCcceeeEEeeCCCCcEEEEEeCCCeEEEEECCCCCCCCCeeEec-----ccCCCeeEE
Q 014472 205 LWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVV-----AHQSEVNCL 279 (424)
Q Consensus 205 vwd~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~~s~~~dg~i~i~d~~~~~~~~~~~~~~-----~~~~~v~~i 279 (424)
.||..+..... ........|.++.. .++ .+. .++.+ -|..+|..+.. +..+. .....|.++
T Consensus 86 ~yd~~~~~f~~------~~~~~~~~i~~i~~-~~g-~lW-igt~~-Gl~~~~~~~~~----~~~~~~~~~~l~~~~i~~i 151 (758)
T 3ott_A 86 VYNYRADRYEQ------PETDFPTDVRTMAL-QGD-TLW-LGALN-GLYTYQLQSRK----LTSFDTRRNGLPNNTIYSI 151 (758)
T ss_dssp EEETTTTEECC------CSCCCCSCEEEEEE-ETT-EEE-EEETT-EEEEEETTTCC----EEEECHHHHCCSCSCEEEE
T ss_pred EEeCCCCEEEC------cccCCCceEEEEEe-cCC-cEE-EEcCC-cceeEeCCCCe----EEEeccCCCCcCCCeEEEE
Confidence 89986542111 00111234666654 344 455 44555 58889987644 22221 123468888
Q ss_pred EecCCCCeEEEEEeCCCcEEEEECCCCCCcceeecC------CCCCEEEEEEcCCCCcEEEEEeCCCeEEEeeCCCCCcc
Q 014472 280 AFNPFNEWILATGSTDKTVKLFDLRKISTALHTFDS------HKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEE 353 (424)
Q Consensus 280 ~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~------~~~~v~~~~~sp~~~~~l~s~~~dg~i~iwd~~~~~~~ 353 (424)
....++. |..|+.. -+..||..+ .. ...+.. ....|.++...+++..+. .|+.. -+..++......
T Consensus 152 ~~d~~g~--lWigt~~-Gl~~~~~~~-~~-~~~~~~~~~~~~~~~~i~~i~~d~~~~~lW-igt~~-Gl~~~~~~~~~~- 223 (758)
T 3ott_A 152 IRTKDNQ--IYVGTYN-GLCRYIPSN-GK-FEGIPLPVHSSQSNLFVNSLLEDTTRQCVW-IGTEG-YLFQYFPSTGQI- 223 (758)
T ss_dssp EECTTCC--EEEEETT-EEEEEETTT-TE-EEEECCCCCTTCSSCCEEEEEEETTTTEEE-EEEEE-EEEEEETTTTEE-
T ss_pred EEcCCCC--EEEEeCC-CHhhCccCC-Cc-eEEecCCCccccccceeEEEEEECCCCEEE-EEECC-CCeEEcCCCCeE-
Confidence 8888776 4445554 477788765 22 222211 123488888887665333 34433 477788765321
Q ss_pred cCCCccCCCCCeeeEEEcCCCCCcceEEeCCCCCcEEEEEeCCCcEEEEecCCCCC
Q 014472 354 QTPEDAEDGPPELLFIHGGHTSKISDFSWNPCEDWVISSVAEDNILQIWQMAENIY 409 (424)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~ 409 (424)
....... ...|.++....++. +.+. ..+ -+.+++..++.+
T Consensus 224 -----------~~~~~l~--~~~i~~i~~d~~g~-lWig-T~~-Gl~~~~~~~~~~ 263 (758)
T 3ott_A 224 -----------KQTEAFH--NNSIKSLALDGNGD-LLAG-TDN-GLYVYHNDTTPL 263 (758)
T ss_dssp -----------EEEEEEE--EEEEEEEEECTTCC-EEEE-ETT-EEEEECCTTSCC
T ss_pred -----------EeccCCC--CCeEEEEEEcCCCC-EEEE-eCC-ceeEEecCCCcE
Confidence 1111111 23478888888888 4443 344 588888876644
No 346
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=90.40 E-value=13 Score=36.64 Aligned_cols=68 Identities=12% Similarity=0.129 Sum_probs=37.8
Q ss_pred CCCceEEEEeCCC--cEEEEeCCCCCCCCcccceee---eecCCcceeeEEeeCCCCcEEEEEeC--C-----CeEEEEE
Q 014472 189 FKEGHLLSGSDDA--QICLWDINAAPKNKSLEAMQI---FKVHEGVVEDVAWHLRHEYLFGSVGD--D-----QYLLIWD 256 (424)
Q Consensus 189 ~~~~~l~s~~~dg--~i~vwd~~~~~~~~~~~~~~~---~~~~~~~v~~i~~~~~~~~~~~s~~~--d-----g~i~i~d 256 (424)
++. +++.|+.++ .+.+||+.+.. +..+.. ..........+.+......+++.|+. + ..+.+||
T Consensus 500 ~~~-iyv~GG~~~~~~v~~yd~~t~~----W~~~~~~g~~p~~r~~~~a~v~~~~~~~iyv~GG~~~~~~~~~~~v~~yd 574 (695)
T 2zwa_A 500 DGN-VLILGGVTEGPAMLLYNVTEEI----FKDVTPKDEFFQNSLVSAGLEFDPVSKQGIILGGGFMDQTTVSDKAIIFK 574 (695)
T ss_dssp TSC-EEEECCBCSSCSEEEEETTTTE----EEECCCSSGGGGSCCBSCEEEEETTTTEEEEECCBCTTSSCBCCEEEEEE
T ss_pred CCE-EEEECCCCCCCCEEEEECCCCc----eEEccCCCCCCCcccceeEEEEeCCCCEEEEECCcCCCCCeeeCcEEEEE
Confidence 344 677776654 68899987652 111111 11111122234555553457777775 2 4588999
Q ss_pred CCCCC
Q 014472 257 LRTPS 261 (424)
Q Consensus 257 ~~~~~ 261 (424)
+.+..
T Consensus 575 ~~~~~ 579 (695)
T 2zwa_A 575 YDAEN 579 (695)
T ss_dssp ECTTC
T ss_pred ccCCc
Confidence 98766
No 347
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=89.89 E-value=5.3 Score=37.11 Aligned_cols=114 Identities=11% Similarity=0.063 Sum_probs=61.7
Q ss_pred CCeeeEEecCCCCceEEEEeCCCcEEEEeCCCCCCCCccccee-eee-----cCCcceeeEEeeCC---CCcEEEEEeC-
Q 014472 179 TEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQ-IFK-----VHEGVVEDVAWHLR---HEYLFGSVGD- 248 (424)
Q Consensus 179 ~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~-~~~-----~~~~~v~~i~~~~~---~~~~~~s~~~- 248 (424)
...+.|+|.|++...|+++...|.|++++.........+..+. .+. ........|+|+|+ +..++++-+.
T Consensus 14 ~~P~~~a~~pdG~~rl~V~er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~f~~n~~lYv~yt~~ 93 (463)
T 2wg3_C 14 RQPVGALHSGDGSQRLFILEKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPNYKKNGKLYVSYTTN 93 (463)
T ss_dssp SSEEEEECCSSSSCCEEEEETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTTHHHHCEEEEEEEEC
T ss_pred CCceEEEECCCCCeEEEEEeCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCCCcCCCEEEEEEeCC
Confidence 3467999999986447777889999999754321111111111 011 11456789999996 3345554332
Q ss_pred -C----------CeEEEEECCCC--CC-----CCCeeEec--ccCCCeeEEEecCCCCeEEEEEe
Q 014472 249 -D----------QYLLIWDLRTP--SV-----SKPVQSVV--AHQSEVNCLAFNPFNEWILATGS 293 (424)
Q Consensus 249 -d----------g~i~i~d~~~~--~~-----~~~~~~~~--~~~~~v~~i~~~~~~~~~l~~g~ 293 (424)
+ ..|.-|.+... .. .+.+..+. ........|+|.|+|. |.++.+
T Consensus 94 ~~~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~g~~l~fgpDG~-LYv~~G 157 (463)
T 2wg3_C 94 QERWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKHLGGQLLFGPDGF-LYIILG 157 (463)
T ss_dssp CCSSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSSCEEEEEECTTSC-EEEEEC
T ss_pred CCCcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCcccCCcEeECCCCc-EEEEeC
Confidence 1 13444665432 10 11122221 1223468999999997 444443
No 348
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=88.51 E-value=2.3 Score=40.15 Aligned_cols=97 Identities=8% Similarity=0.168 Sum_probs=64.8
Q ss_pred eEEEEECCCCCC-CCCeeEecccCCCeeEEEecCCCCeEEEEEeCCCcEEEEECCCCCC-----------c-ceeecCCC
Q 014472 251 YLLIWDLRTPSV-SKPVQSVVAHQSEVNCLAFNPFNEWILATGSTDKTVKLFDLRKIST-----------A-LHTFDSHK 317 (424)
Q Consensus 251 ~i~i~d~~~~~~-~~~~~~~~~~~~~v~~i~~~~~~~~~l~~g~~dg~i~iwd~~~~~~-----------~-~~~~~~~~ 317 (424)
.+.+.|.+.... ...+..+-.-......+..+|+|++++++|-.+.++.++|+++... . +.... -.
T Consensus 299 gv~ViD~~~~~~~~~~~~~~iP~pksPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e-~G 377 (638)
T 3sbq_A 299 KTPVLDGRKKDGKDSKFTRYVPVPKNPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPE-LG 377 (638)
T ss_dssp CCCEEECSCBTTBCCSSEEEEEESSSCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCB-CC
T ss_pred CeeEEccccccccCCceEEEEeCCCCCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeecc-CC
Confidence 356666665211 0112222233455678899999999888888899999999984211 1 11222 34
Q ss_pred CCEEEEEEcCCCCcEEEEEeCCCeEEEeeCCC
Q 014472 318 EEVFQVGWNPKNETILASCCLGRRLMVWDLSR 349 (424)
Q Consensus 318 ~~v~~~~~sp~~~~~l~s~~~dg~i~iwd~~~ 349 (424)
......+|.++| +...+..-|..|.-|++..
T Consensus 378 lGPlHt~Fd~~G-~aYTtlfidSqvvkWni~~ 408 (638)
T 3sbq_A 378 LGPLHTTFDGRG-NAYTTLFIDSQVVKWNMEE 408 (638)
T ss_dssp SCEEEEEECSSS-EEEEEETTTTEEEEEEHHH
T ss_pred CcccEEEECCCC-ceEeeeeecceEEEEeccH
Confidence 567889999998 5666677899999999865
No 349
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=88.03 E-value=4.1 Score=36.11 Aligned_cols=51 Identities=6% Similarity=0.038 Sum_probs=22.4
Q ss_pred cEEEEECCCCC-CcceeecCCCCCEEEEEEcCCCCcEEEEEeCCC------eEEEeeCCCC
Q 014472 297 TVKLFDLRKIS-TALHTFDSHKEEVFQVGWNPKNETILASCCLGR------RLMVWDLSRI 350 (424)
Q Consensus 297 ~i~iwd~~~~~-~~~~~~~~~~~~v~~~~~sp~~~~~l~s~~~dg------~i~iwd~~~~ 350 (424)
.+.+||+.+.. ..+..+......-.++.+ ++ .+++.|+.++ .|.+++++..
T Consensus 286 ~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~-~i~v~GG~~~~~~~~~~v~~l~~~~~ 343 (357)
T 2uvk_A 286 STDIHLWHNGKWDKSGELSQGRAYGVSLPW--NN-SLLIIGGETAGGKAVTDSVLITVKDN 343 (357)
T ss_dssp CCEEEECC---CEEEEECSSCCBSSEEEEE--TT-EEEEEEEECGGGCEEEEEEEEEC-CC
T ss_pred eEEEEecCCCceeeCCCCCCCcccceeEEe--CC-EEEEEeeeCCCCCEeeeEEEEEEcCc
Confidence 57789987521 122222222222222222 34 4677777542 2445566654
No 350
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=86.54 E-value=5.9 Score=35.00 Aligned_cols=115 Identities=12% Similarity=0.094 Sum_probs=62.8
Q ss_pred eEEEEeCCCcEEEEeCCCCCCCCcccceeeeecCCcceeeEEe--eCCCCcEEEEE-eCCCeEEEEECCCCCCCCCeeEe
Q 014472 193 HLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAW--HLRHEYLFGSV-GDDQYLLIWDLRTPSVSKPVQSV 269 (424)
Q Consensus 193 ~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~i~~--~~~~~~~~~s~-~~dg~i~i~d~~~~~~~~~~~~~ 269 (424)
+++.++.||.|.-+|..+++....+... ...++....- .+.+..+++.. +.||.|..++..++....+. ..
T Consensus 12 ~V~v~t~dG~l~Ald~~tG~~~W~~~~~-----~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~~~~-~~ 85 (339)
T 2be1_A 12 ILIAADVEGGLHAVDRRNGHIIWSIEPE-----NFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQKLPL-SI 85 (339)
T ss_dssp EEEEEETTSCEEEEETTTTEEEEEECGG-----GSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEEEEE-EH
T ss_pred EEEEEeCCCeEEEEECCCCcEEEEecCC-----ccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCCcEEeee-cc
Confidence 6889999999999999887543332211 0011111100 01122344333 58999999998775321100 00
Q ss_pred c--ccCCCeeE---EEe-cC----CCCeEEEEEeCCCcEEEEECCCCCCcceeecC
Q 014472 270 V--AHQSEVNC---LAF-NP----FNEWILATGSTDKTVKLFDLRKISTALHTFDS 315 (424)
Q Consensus 270 ~--~~~~~v~~---i~~-~~----~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~ 315 (424)
. ...+++.. ... .+ .+. .+++|+.+|.+...|+++ ++.+..+..
T Consensus 86 ~~lv~~SP~~~~~~pvv~~~~~~~~~g-~Vy~Gs~~g~l~ald~~t-G~~~W~~~~ 139 (339)
T 2be1_A 86 RQLVSTSPLHLKTNIVVNDSGKIVEDE-KVYTGSMRTIMYTINMLN-GEIISAFGP 139 (339)
T ss_dssp HHHHTTCSEEEECC----------CCE-EEEECEEEEEEEEEETTT-CCEEEEEST
T ss_pred ccceeccccccCCCceeecccccccCC-EEEEEecCCEEEEEECCC-CcEEEEEec
Confidence 0 01122221 000 00 233 588999999999999998 777777654
No 351
>1sqj_A OXG-RCBH, oligoxyloglucan reducing-END-specific cellobiohydrolase; beta-propeller; 2.20A {Geotrichum SP} SCOP: b.69.13.1 b.69.13.1 PDB: 2ebs_A*
Probab=83.67 E-value=38 Score=33.88 Aligned_cols=156 Identities=12% Similarity=0.056 Sum_probs=78.2
Q ss_pred CCCeeeEEecCCCCceEEEEeCCCcEEEEeCCCCCCCCcccceeeeec----CCcceeeEEeeCCCCcEEEEEeCCCe--
Q 014472 178 STEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKV----HEGVVEDVAWHLRHEYLFGSVGDDQY-- 251 (424)
Q Consensus 178 ~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~----~~~~v~~i~~~~~~~~~~~s~~~dg~-- 251 (424)
.+.|.+|+++|..+..++++...+.|...+= .+ ..++.+..... ....+.+|+++|..+..+.++.....
T Consensus 14 ~g~i~~i~~~p~~~~~~~a~~~~ggv~rS~D-gG---~tW~~~~~~~~~~~~~~~~i~~ia~dp~~~~~i~~~~g~~~~~ 89 (789)
T 1sqj_A 14 GGYITGIVAHPKTKDLLYARTDIGGAYRWDA-GT---SKWIPLNDFIEAQDMNIMGTESIALDPNNPDRLYLAQGRYVGD 89 (789)
T ss_dssp CSCEEEEEECSSSTTCEEEEESSSCEEEEET-TT---TEEEESCTTCCGGGGGGCSEEEEEEETTEEEEEEEEECSCTTS
T ss_pred CCcEEEEEECCCCCCEEEEEecCCCEEEecC-CC---CCeeECccCCCcccccCCceeEEEECCCCCCEEEEEeCccCCC
Confidence 4579999999987777888877776654432 12 22222211110 12468999999865444434432211
Q ss_pred --EEEEE-CCCCCCCCCeeEe-c-----ccCCCeeEEEecCCCCeEEEEEeCCCcEEEEECCCCCCcceeec------CC
Q 014472 252 --LLIWD-LRTPSVSKPVQSV-V-----AHQSEVNCLAFNPFNEWILATGSTDKTVKLFDLRKISTALHTFD------SH 316 (424)
Q Consensus 252 --i~i~d-~~~~~~~~~~~~~-~-----~~~~~v~~i~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~------~~ 316 (424)
-.||- ...++....+..- . .....+..++++|.....+..+...+. ||-....++--..+. ..
T Consensus 90 ~~~~v~~S~DgG~TW~~~~~~~~~~~~~~~~~~~~~iav~p~~~~~v~~g~~~~g--l~~S~DgG~TW~~~~~~~~~~~~ 167 (789)
T 1sqj_A 90 EWAAFYVSEDRGQSFTIYESPFPMGANDMGRNNGERLAVNPFNSNEVWMGTRTEG--IWKSSDRAKTWTNVTSIPDAFTN 167 (789)
T ss_dssp SCCEEEEESSTTSEEEEEECSSCCCTTSTTTTSCCCEEEETTEEEEEEEECSSSC--EEEESSTTSSCEEETTSCCCCST
T ss_pred cccEEEEECCCCCcceeccCCcccCccCCCccceeEEEEcCCCCCEEEEEeccCC--EEEECCCCcccCCCccCccccCC
Confidence 23332 3333321111110 0 001135678888866555666664433 333333233222222 11
Q ss_pred CCCEEEEEEcCCCCcEEEEEeCC
Q 014472 317 KEEVFQVGWNPKNETILASCCLG 339 (424)
Q Consensus 317 ~~~v~~~~~sp~~~~~l~s~~~d 339 (424)
...+..+.++|.....++++..+
T Consensus 168 ~~~~~~i~~~p~~~~~~~~~~~~ 190 (789)
T 1sqj_A 168 GIGYTSVIFDPERNGTIYASATA 190 (789)
T ss_dssp TTCEEEEEECTTSTTCEEEEESS
T ss_pred CCCeEEEEECCCCCCEEEEEEcC
Confidence 24688899998654345455443
No 352
>2cn3_A Xyloglucanase, beta-1,4-xyloglucan hydrolase; glycosylhydrolase, family GH74; HET: GLC BGC GAL; 1.95A {Clostridium thermocellum} PDB: 2cn2_A*
Probab=83.41 E-value=37 Score=33.59 Aligned_cols=110 Identities=13% Similarity=0.057 Sum_probs=58.6
Q ss_pred CceeEEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEecC-------CCCeeeEEecCCCCceEEEEe
Q 014472 126 GEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGH-------STEGYGLSWSKFKEGHLLSGS 198 (424)
Q Consensus 126 ~~v~~i~~~p~~~~~latg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~h-------~~~v~~l~~~~~~~~~l~s~~ 198 (424)
+.|..|+++|.++..+.++...|.|...+-.. ..+.+ +..+ ...|.+|++.|...+.++++.
T Consensus 23 g~i~~i~~~p~~~~~~~~~~~~ggv~rS~D~G--------~tW~~---i~~~~~~~~~~~~~i~~i~~dp~~~~~v~v~~ 91 (737)
T 2cn3_A 23 GFMPGIVFNETEKDLIYARAAIGGAYRWDPST--------ETWIP---LLDHFQMDEYSYYGVESIATDPVDPNRVYIVA 91 (737)
T ss_dssp SCCCEEEECSSSTTCEEEECSSSCEEEEETTT--------TEEEE---CCTTCCGGGGGGGCEEEEEECSSSTTCEEEEE
T ss_pred ceeeEEEECCCCCCEEEEEecCCcEEEeCCCC--------CCEEE---CcCccCcccccCCCcceEEeCCCCCCEEEEEe
Confidence 38999999998766677777667666555322 11211 2111 235889999986655555554
Q ss_pred CC-------CcEEEEeCCCCCCCCcccceee-ee--c-C--CcceeeEEeeCCCCcEEEEEeC
Q 014472 199 DD-------AQICLWDINAAPKNKSLEAMQI-FK--V-H--EGVVEDVAWHLRHEYLFGSVGD 248 (424)
Q Consensus 199 ~d-------g~i~vwd~~~~~~~~~~~~~~~-~~--~-~--~~~v~~i~~~~~~~~~~~s~~~ 248 (424)
.. +...||.-..+.. .++.+.. +. . . ...+..|+++|..+..+.++..
T Consensus 92 ~~~~~~~~~~~~~l~~S~DgG~--TW~~~~~~~~~~~~~~g~~~~~~l~~~p~~~~~v~~g~~ 152 (737)
T 2cn3_A 92 GMYTNDWLPNMGAILRSTDRGE--TWEKTILPFKMGGNMPGRSMGERLAIDPNDNRILYLGTR 152 (737)
T ss_dssp CSCSSSSSCCCCEEEEESSSSS--SCEEEECSSCCCTTSTTTTSCCCEEECSSCTTCEEEECS
T ss_pred cccccccccCCccEEEeCCCCC--CcccCCCCcccCCCcCcccccceEEECCCCCCEEEEeec
Confidence 21 1244554443322 2222211 11 0 0 1134678999876555555553
No 353
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=82.61 E-value=23 Score=30.58 Aligned_cols=141 Identities=9% Similarity=0.014 Sum_probs=72.4
Q ss_pred EEecCCCCceEEEEe--CC--CcEEEEeCCCCCCCCcccceeeeecCCcceeeEEeeCCCCcEEEEEeCCCeEEEEECCC
Q 014472 184 LSWSKFKEGHLLSGS--DD--AQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRT 259 (424)
Q Consensus 184 l~~~~~~~~~l~s~~--~d--g~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~~s~~~dg~i~i~d~~~ 259 (424)
..|++.+. .|+-.. .+ ..|...++.... ...+..+.. ..++++++.++-+......|.+.++..
T Consensus 109 ~~~s~~g~-~Iy~~~~~~~~~~~Iy~~~~dGs~-------~~~lt~~~~----~~~~~~g~~iy~t~~g~~~Iy~~~l~g 176 (302)
T 3s25_A 109 IYASLIGN-YIYYLHYDTQTATSLYRIRIDGEE-------KKKIKNHYL----FTCNTSDRYFYYNNPKNGQLYRYDTAS 176 (302)
T ss_dssp EEEEEETT-EEEEEEESSSSCEEEEEEETTSCC-------CEEEESSCC----CCSEEETTEEEEECTTTCCEEEEETTT
T ss_pred cEEEEeCC-EEEEEeecCCCCceEEEEECCCCC-------eEEEeCCCc----eEeeEECCEEEEEeCCCceEEEEECCC
Confidence 36677777 455444 33 445555554321 112222222 356777887775644467888888876
Q ss_pred CCCCCCeeEecccCCCeeEEEecCCCCeEEEEEeCCC-cEEEEECCCCCCcceeecCCCCCEEEEEEcCCCCcEEEEEe-
Q 014472 260 PSVSKPVQSVVAHQSEVNCLAFNPFNEWILATGSTDK-TVKLFDLRKISTALHTFDSHKEEVFQVGWNPKNETILASCC- 337 (424)
Q Consensus 260 ~~~~~~~~~~~~~~~~v~~i~~~~~~~~~l~~g~~dg-~i~iwd~~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~s~~- 337 (424)
... ..+. ..... ..+.|.+.+++.+-..++ .|..-++.. .....+. ...+ ..|+|.+..++.+..
T Consensus 177 ~~~----~~l~--~~~~~-~~~~P~g~~iy~t~~~~~~~I~~~~ldG--~~~~~Lt--~~~~--~~~~~~g~~Iy~~~~~ 243 (302)
T 3s25_A 177 QSE----ALFY--DCNCY-KPVVLDDTNVYYMDVNRDNAIVHVNINN--PNPVVLT--EANI--EHYNVYGSLIFYQRGG 243 (302)
T ss_dssp TEE----EEEE--CSCEE-EEEEEETTEEEEEEGGGTTEEEEECSSS--CCCEECS--CSCE--EEEEEETTEEEEEECS
T ss_pred CCE----EEEe--CCCcc-ceeeecCCEEEEEEcCCCcEEEEEECCC--CCeEEEe--CCCc--ceEEECCCEEEEEECC
Confidence 442 2221 22222 345688887666544333 455555554 3333343 2233 347788875544322
Q ss_pred CCCeEEEeeCCC
Q 014472 338 LGRRLMVWDLSR 349 (424)
Q Consensus 338 ~dg~i~iwd~~~ 349 (424)
..+.|..-++.-
T Consensus 244 ~~~~i~~~~~DG 255 (302)
T 3s25_A 244 DNPALCVVKNDG 255 (302)
T ss_dssp SSCEEEEEETTS
T ss_pred CCcEEEEEECCC
Confidence 234555555543
No 354
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=71.53 E-value=14 Score=35.09 Aligned_cols=77 Identities=6% Similarity=-0.058 Sum_probs=55.2
Q ss_pred cceeeEEeeCCCCcEEEEEeCCCeEEEEECCCC------CCCC---CeeEecccCCCeeEEEecCCCCeEEEEEeCCCcE
Q 014472 228 GVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTP------SVSK---PVQSVVAHQSEVNCLAFNPFNEWILATGSTDKTV 298 (424)
Q Consensus 228 ~~v~~i~~~~~~~~~~~s~~~dg~i~i~d~~~~------~~~~---~~~~~~~~~~~v~~i~~~~~~~~~l~~g~~dg~i 298 (424)
.....+..+|+|++++++|-.+.++.++|++.- +... .+..-..-.......+|+++| +...+-.-|..|
T Consensus 323 ksPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e~GlGPlHt~Fd~~G-~aYTtlfidSqv 401 (638)
T 3sbq_A 323 KNPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPELGLGPLHTTFDGRG-NAYTTLFIDSQV 401 (638)
T ss_dssp SSCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCBCCSCEEEEEECSSS-EEEEEETTTTEE
T ss_pred CCCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeeccCCCcccEEEECCCC-ceEeeeeecceE
Confidence 455678899999999999989999999999841 1101 111111234467788999988 456666689999
Q ss_pred EEEECCC
Q 014472 299 KLFDLRK 305 (424)
Q Consensus 299 ~iwd~~~ 305 (424)
.-|++..
T Consensus 402 vkWni~~ 408 (638)
T 3sbq_A 402 VKWNMEE 408 (638)
T ss_dssp EEEEHHH
T ss_pred EEEeccH
Confidence 9999864
No 355
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=67.26 E-value=65 Score=28.28 Aligned_cols=110 Identities=6% Similarity=0.006 Sum_probs=55.2
Q ss_pred EEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEecC-CCCeeeEEec--CCCCceEEEE-eCCCcEEEEeCCCCCCCC
Q 014472 140 LIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGH-STEGYGLSWS--KFKEGHLLSG-SDDAQICLWDINAAPKNK 215 (424)
Q Consensus 140 ~latg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~h-~~~v~~l~~~--~~~~~~l~s~-~~dg~i~vwd~~~~~~~~ 215 (424)
++++++.||.|+-+|..+ .+...++... ..++....-. +.+...++.. +.||.|..++..++....
T Consensus 12 ~V~v~t~dG~l~Ald~~t----------G~~~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~~ 81 (339)
T 2be1_A 12 ILIAADVEGGLHAVDRRN----------GHIIWSIEPENFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQKL 81 (339)
T ss_dssp EEEEEETTSCEEEEETTT----------TEEEEEECGGGSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEEE
T ss_pred EEEEEeCCCeEEEEECCC----------CcEEEEecCCccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCCcEEe
Confidence 677778888888888765 2333333322 1122111100 1122233333 589999999987652211
Q ss_pred cccceeeeecCCcceee---EEe-e----CCCCcEEEEEeCCCeEEEEECCCCCC
Q 014472 216 SLEAMQIFKVHEGVVED---VAW-H----LRHEYLFGSVGDDQYLLIWDLRTPSV 262 (424)
Q Consensus 216 ~~~~~~~~~~~~~~v~~---i~~-~----~~~~~~~~s~~~dg~i~i~d~~~~~~ 262 (424)
.+.. ..+. ...++.. ... . ..+. .+.+|+.+|.+...|+++++.
T Consensus 82 ~~~~-~~lv-~~SP~~~~~~pvv~~~~~~~~~g-~Vy~Gs~~g~l~ald~~tG~~ 133 (339)
T 2be1_A 82 PLSI-RQLV-STSPLHLKTNIVVNDSGKIVEDE-KVYTGSMRTIMYTINMLNGEI 133 (339)
T ss_dssp EEEH-HHHH-TTCSEEEECC----------CCE-EEEECEEEEEEEEEETTTCCE
T ss_pred eecc-ccce-eccccccCCCceeecccccccCC-EEEEEecCCEEEEEECCCCcE
Confidence 1000 0000 1112211 000 0 0222 456899999999999999875
No 356
>2cn3_A Xyloglucanase, beta-1,4-xyloglucan hydrolase; glycosylhydrolase, family GH74; HET: GLC BGC GAL; 1.95A {Clostridium thermocellum} PDB: 2cn2_A*
Probab=65.35 E-value=1.1e+02 Score=30.20 Aligned_cols=110 Identities=14% Similarity=0.040 Sum_probs=57.4
Q ss_pred CeeeEEecCCCCceEEEEeCCCcEEEEeCCCCCCCCcccceeeeec----CCcceeeEEeeCCCC-cEEEEEeCC-----
Q 014472 180 EGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKV----HEGVVEDVAWHLRHE-YLFGSVGDD----- 249 (424)
Q Consensus 180 ~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~----~~~~v~~i~~~~~~~-~~~~s~~~d----- 249 (424)
.|.+|+++|..++.++++...|.|...+-. + ..++.+..... ....|.+|+++|..+ .++++.+..
T Consensus 24 ~i~~i~~~p~~~~~~~~~~~~ggv~rS~D~-G---~tW~~i~~~~~~~~~~~~~i~~i~~dp~~~~~v~v~~~~~~~~~~ 99 (737)
T 2cn3_A 24 FMPGIVFNETEKDLIYARAAIGGAYRWDPS-T---ETWIPLLDHFQMDEYSYYGVESIATDPVDPNRVYIVAGMYTNDWL 99 (737)
T ss_dssp CCCEEEECSSSTTCEEEECSSSCEEEEETT-T---TEEEECCTTCCGGGGGGGCEEEEEECSSSTTCEEEEECSCSSSSS
T ss_pred eeeEEEECCCCCCEEEEEecCCcEEEeCCC-C---CCEEECcCccCcccccCCCcceEEeCCCCCCEEEEEecccccccc
Confidence 789999999876677777766665554422 1 22222211111 124689999998543 455443320
Q ss_pred -CeEEEEECC-CCCCCCCeeEeccc-------CCCeeEEEecCCCCeEEEEEeC
Q 014472 250 -QYLLIWDLR-TPSVSKPVQSVVAH-------QSEVNCLAFNPFNEWILATGST 294 (424)
Q Consensus 250 -g~i~i~d~~-~~~~~~~~~~~~~~-------~~~v~~i~~~~~~~~~l~~g~~ 294 (424)
+...||... .++..+.+.. ... ...+.+|+++|..+..+..+..
T Consensus 100 ~~~~~l~~S~DgG~TW~~~~~-~~~~~~~~~g~~~~~~l~~~p~~~~~v~~g~~ 152 (737)
T 2cn3_A 100 PNMGAILRSTDRGETWEKTIL-PFKMGGNMPGRSMGERLAIDPNDNRILYLGTR 152 (737)
T ss_dssp CCCCEEEEESSSSSSCEEEEC-SSCCCTTSTTTTSCCCEEECSSCTTCEEEECS
T ss_pred cCCccEEEeCCCCCCcccCCC-CcccCCCcCcccccceEEECCCCCCEEEEeec
Confidence 123444433 3333222211 100 1134689999876555666653
No 357
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=58.56 E-value=24 Score=36.20 Aligned_cols=34 Identities=15% Similarity=0.195 Sum_probs=27.5
Q ss_pred CcceEEeCCCCCcEEEEEeCCCcEEEEecCCCCCC
Q 014472 376 KISDFSWNPCEDWVISSVAEDNILQIWQMAENIYH 410 (424)
Q Consensus 376 ~v~~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~~ 410 (424)
.+.+++..++.. ++++-+.|+++|||++.++.+.
T Consensus 237 ~~~~~~~~~~~~-~lftl~~D~~LRiWsl~t~~~v 270 (950)
T 4gq2_M 237 TIISMIFLSTYN-VLVMLSLDYKLKVLDLSTNQCV 270 (950)
T ss_dssp CEEEEEEETTTT-EEEEEETTCEEEEEETTTTEEE
T ss_pred eEEEEeecCCCc-EEEEEECCCEEEEEECCCCCeE
Confidence 456677777777 6888899999999999998543
No 358
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=53.16 E-value=35 Score=35.02 Aligned_cols=33 Identities=12% Similarity=0.016 Sum_probs=26.4
Q ss_pred CeeeEEecCCCCceEEEEeCCCcEEEEeCCCCCC
Q 014472 180 EGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPK 213 (424)
Q Consensus 180 ~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~ 213 (424)
.+.+++..++.. ++++-+.|+++++|++.+++.
T Consensus 237 ~~~~~~~~~~~~-~lftl~~D~~LRiWsl~t~~~ 269 (950)
T 4gq2_M 237 TIISMIFLSTYN-VLVMLSLDYKLKVLDLSTNQC 269 (950)
T ss_dssp CEEEEEEETTTT-EEEEEETTCEEEEEETTTTEE
T ss_pred eEEEEeecCCCc-EEEEEECCCEEEEEECCCCCe
Confidence 456777776555 799999999999999988754
No 359
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=48.97 E-value=1.6e+02 Score=27.06 Aligned_cols=259 Identities=10% Similarity=0.067 Sum_probs=120.4
Q ss_pred CceeEEEecCCCC-cEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEe---------cCCCCeeeEEecCC---CCc
Q 014472 126 GEVNRARYMPQNP-FLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLR---------GHSTEGYGLSWSKF---KEG 192 (424)
Q Consensus 126 ~~v~~i~~~p~~~-~~latg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~---------~h~~~v~~l~~~~~---~~~ 192 (424)
.....|+|.|++. .++++ ...|.|++++...... ..++..+. ........|+|+|+ +..
T Consensus 14 ~~P~~~a~~pdG~~rl~V~-er~G~i~~~~~~g~~~-------~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~f~~n~~ 85 (463)
T 2wg3_C 14 RQPVGALHSGDGSQRLFIL-EKEGYVKILTPEGEIF-------KEPYLDIHKLVQSGIKGGDERGLLSLAFHPNYKKNGK 85 (463)
T ss_dssp SSEEEEECCSSSSCCEEEE-ETTTEEEEECTTSCBC-------SSCSEECTTTBCCCCSSSCCCSEEEEEECTTHHHHCE
T ss_pred CCceEEEECCCCCeEEEEE-eCCceEEEEeCCCCee-------eeeecCCcceeccCccccCCCcceeeEeCCCCcCCCE
Confidence 4557899999985 35554 6789999997543110 11111111 12456789999996 222
Q ss_pred eEEEEeC--C----------CcEEEEeCCCCCC--C--Ccccceeeee--cCCcceeeEEeeCCCCcEEEEEeCC-----
Q 014472 193 HLLSGSD--D----------AQICLWDINAAPK--N--KSLEAMQIFK--VHEGVVEDVAWHLRHEYLFGSVGDD----- 249 (424)
Q Consensus 193 ~l~s~~~--d----------g~i~vwd~~~~~~--~--~~~~~~~~~~--~~~~~v~~i~~~~~~~~~~~s~~~d----- 249 (424)
+.++-+. + ..|.-|.+..... . ...+.+..+. ........|+|.|++. |+++.++.
T Consensus 86 lYv~yt~~~~~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~g~~l~fgpDG~-LYv~~Gd~~~~~~ 164 (463)
T 2wg3_C 86 LYVSYTTNQERWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKHLGGQLLFGPDGF-LYIILGDGMITLD 164 (463)
T ss_dssp EEEEEEECCCSSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSSCEEEEEECTTSC-EEEEECCTTCCHH
T ss_pred EEEEEeCCCCCcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCcccCCcEeECCCCc-EEEEeCCCCCCCC
Confidence 3333221 1 1344466653211 0 1111111111 1122457899999985 65565543
Q ss_pred ------------CeEEEEECCCCC------C------------CCCeeEecccCCCeeEEEecCC-----CCeEEEEEeC
Q 014472 250 ------------QYLLIWDLRTPS------V------------SKPVQSVVAHQSEVNCLAFNPF-----NEWILATGST 294 (424)
Q Consensus 250 ------------g~i~i~d~~~~~------~------------~~~~~~~~~~~~~v~~i~~~~~-----~~~~l~~g~~ 294 (424)
|.|.-.|..... . ...+. -.+|. ....++|+|. |...+..+..
T Consensus 165 ~~~~~q~~~~~~GkIlRi~~dg~~~~~~y~iP~dNPf~~~~~~~~eI~-a~G~R-Np~gla~dp~tg~~~G~l~~~~~D~ 242 (463)
T 2wg3_C 165 DMEEMDGLSDFTGSVLRLDVDTDMCNVPYSIPRSNPHFNSTNQPPEVF-AHGLH-DPGRCAVDRHPTDININLTILCSDS 242 (463)
T ss_dssp HHHHCTTCCSCTTEEEEEBCCCCCSSCSCBCCTTSTTTTCSSSCTTEE-EECCS-SCCBEEEESSCSSTTCSEEEEEECC
T ss_pred ccccccCcCCCCeeEEEEECCCCcccccCcCCCCCCCcCCCCCcccEE-EECCC-CcceEEECCCCCCcccceEEEeccc
Confidence 334444444310 0 00111 12333 3457899996 3312333332
Q ss_pred CC----cEEEEECCCC-----CCcceeecCCC-CCEEEEEEcCCC------CcEEEEEeCCCeEEEeeCCCCCcccCCCc
Q 014472 295 DK----TVKLFDLRKI-----STALHTFDSHK-EEVFQVGWNPKN------ETILASCCLGRRLMVWDLSRIDEEQTPED 358 (424)
Q Consensus 295 dg----~i~iwd~~~~-----~~~~~~~~~~~-~~v~~~~~sp~~------~~~l~s~~~dg~i~iwd~~~~~~~~~~~~ 358 (424)
.| .-.|..+... ..|+..+..|. .+++.+.|-... ..+| .+...+.|....+.......
T Consensus 243 ~G~~~~~~ei~~i~~G~~yG~~~P~~~~~~~~g~Ap~G~~~Y~G~~fP~~~g~~f-~~~~~g~i~~~~~~~~~~~~---- 317 (463)
T 2wg3_C 243 NGKNRSSARILQIIKGKDYESEPSLLEFKPFSNGPLVGGFVYRGCQSERLYGSYV-FGDRNGNFLTLQQSPVTKQW---- 317 (463)
T ss_dssp ------CEEEEEEC----CCSCCCCEECCC----CEEEEEECCCSSCTTTTTCEE-EEETTSCEEEEEC-----CC----
T ss_pred CCCCCCCCeEeeeccCCCCCCCCCeEEeeCCCCccccceEEEeCCCChhhcceEE-EecCCCcEEEEEeCCCCcee----
Confidence 12 2234444321 14566665442 578888885321 1234 44445666555554321100
Q ss_pred cCCCCCeeeEEE------cCCCCCcceEEeCCCCCcEEEEEeCC-----CcEEEEecC
Q 014472 359 AEDGPPELLFIH------GGHTSKISDFSWNPCEDWVISSVAED-----NILQIWQMA 405 (424)
Q Consensus 359 ~~~~~~~~~~~~------~~h~~~v~~~~~~~~~~~~l~s~~~d-----~~i~iw~~~ 405 (424)
..+.+..- ..-...+.++...|+|. |+++.... ..=+||++.
T Consensus 318 ----~~~~~~~g~~~~~~~~~~~r~~~v~~~pdG~-Lyv~~~~~~~~~~~~G~I~Ri~ 370 (463)
T 2wg3_C 318 ----QEKPLCLGTSGSCRGYFSGHILGFGEDELGE-VYILSSSKSMTQTHNGKLYKIV 370 (463)
T ss_dssp ----EEEEECEEETTSSCSCCCSEEEEEEECTTCC-EEEEEESSCGGGCSSEEEEEEE
T ss_pred ----eEEEeecCCcccccccccCcceEEEECCCCC-EEEEeccCCcccCCCCcEEEec
Confidence 00111000 11234689999999999 55554410 223567765
No 360
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=44.18 E-value=38 Score=35.54 Aligned_cols=33 Identities=15% Similarity=0.221 Sum_probs=26.8
Q ss_pred CcceEEeCCCCCcEEEEEeCCCcEEEEecCCCCC
Q 014472 376 KISDFSWNPCEDWVISSVAEDNILQIWQMAENIY 409 (424)
Q Consensus 376 ~v~~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~ 409 (424)
.+.+++..++.. ++++-+.|+.+|||++.++.+
T Consensus 239 ~~vs~~~~~~~~-~lftL~~D~~LRiWsl~t~~~ 271 (1139)
T 4fhn_B 239 TIISMIFLSTYN-VLVMLSLDYKLKVLDLSTNQC 271 (1139)
T ss_dssp CBSCCEEETTTT-EEEEEBTTCEEEEEETTTTEE
T ss_pred eeEEeeccCCcc-EEEEEeCCCEEEEEECCCCCe
Confidence 455666777777 688889999999999999854
No 361
>3a0f_A Xyloglucanase; beta-propeller, hydrolase; 2.50A {Geotrichum SP}
Probab=43.73 E-value=2.5e+02 Score=27.76 Aligned_cols=163 Identities=12% Similarity=0.041 Sum_probs=77.5
Q ss_pred ccCCceeEEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEE-Ee----c----CCCCeeeEEecCCCCce
Q 014472 123 NHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLR-LR----G----HSTEGYGLSWSKFKEGH 193 (424)
Q Consensus 123 ~h~~~v~~i~~~p~~~~~latg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~-~~----~----h~~~v~~l~~~~~~~~~ 193 (424)
+-.+.|.+|+++|.++.++.++...|.|....=.. ..+.++.. +. + ....+.+|++.|...+.
T Consensus 18 g~~g~i~~i~~~p~~~~~~y~~~~~ggv~~S~DgG--------~tW~~~~~~~~~~~~~~~~~~~~~~~~ia~dp~~~~~ 89 (763)
T 3a0f_A 18 SGGGFISGLVAHPTEKDLIYARTDIGGTYRWNAAK--------WEWEPITDFIINNALAGNGANLLGTESIALDPHNPDR 89 (763)
T ss_dssp CBCSCEEEEEECSSSTTCEEEEESSSCEEEEETTT--------TEEEESCTTCBTTCSSSCCCCCCSEEEEECCTTCTTC
T ss_pred cCCCceeEEEeCCCCCCEEEEEeccCcEEEECCCC--------CCeeECccCccccccCCCcccccceeEEEECCCCCCE
Confidence 45678999999998877777777667655443221 01111110 00 0 12358899998865545
Q ss_pred EEEEeCC-----CcEEEEeCCCCCCCCcccceee-eec--C-Ccc--eeeEEeeCCCCcEEEEEeCCCeEEEEECCCCCC
Q 014472 194 LLSGSDD-----AQICLWDINAAPKNKSLEAMQI-FKV--H-EGV--VEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSV 262 (424)
Q Consensus 194 l~s~~~d-----g~i~vwd~~~~~~~~~~~~~~~-~~~--~-~~~--v~~i~~~~~~~~~~~s~~~dg~i~i~d~~~~~~ 262 (424)
++++... ....||.-..+. ..++.+.. ... . .+. ...++++|..+..+.++...+.|. .....++.
T Consensus 90 ~~~~~g~~~~~~~~~~i~~S~DgG--~TW~~~~~~~~~~~~~~g~~~~~~l~v~p~~~~~v~a~~~~~~l~-~S~DgG~T 166 (763)
T 3a0f_A 90 LYLAQGDYVQWDPWAAFLVSDDRG--KTFKQYRSPVPMGANDMGRNGGERLAVNPHWTDELWFGSRTQGLW-RSTDRAQT 166 (763)
T ss_dssp EEEEECSCTTTCSCCEEEEESSTT--SSCEEEECSSCCCTTSTTTTSBCCEEECTTSTTCEEEECSSSCEE-EESSTTSS
T ss_pred EEEEecccccCCCCceEEEECCCC--CCceeccCCcccCccccCccccceEEECCCCCCEEEEEeCCCcEE-EECCCCcC
Confidence 5554321 123344333322 22222221 000 0 111 146888886544444555544332 22233332
Q ss_pred CCCeeEecc---cCCCeeEEEecCCCCeEEEEEeCCC
Q 014472 263 SKPVQSVVA---HQSEVNCLAFNPFNEWILATGSTDK 296 (424)
Q Consensus 263 ~~~~~~~~~---~~~~v~~i~~~~~~~~~l~~g~~dg 296 (424)
...+..+.. ....+..|+++|.++..++.+..++
T Consensus 167 W~~~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~ 203 (763)
T 3a0f_A 167 WSRMNQLPDSSTYGIGIISVIFDPKNVGTAYVASHAV 203 (763)
T ss_dssp CEECTTSCCCSCTTTCEEEEEECSSSTTCEEEEESST
T ss_pred ccccccCcccCCCccceEEEEECCCCCCEEEEEEeCC
Confidence 221111111 1134778899886543355555554
No 362
>3a0f_A Xyloglucanase; beta-propeller, hydrolase; 2.50A {Geotrichum SP}
Probab=39.17 E-value=3e+02 Score=27.25 Aligned_cols=158 Identities=18% Similarity=0.125 Sum_probs=76.6
Q ss_pred CCCCeeeEEecCCCCceEEEEeCCCcEEEEeCCCCCCCCcccceeeee-----c----CCcceeeEEeeCCC-CcEEEEE
Q 014472 177 HSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFK-----V----HEGVVEDVAWHLRH-EYLFGSV 246 (424)
Q Consensus 177 h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~-----~----~~~~v~~i~~~~~~-~~~~~s~ 246 (424)
-.+.|.+|.++|.++..++++...|.|...+ .+. ..+..+.... . ....+.+|+++|.. ..+++..
T Consensus 19 ~~g~i~~i~~~p~~~~~~y~~~~~ggv~~S~--DgG--~tW~~~~~~~~~~~~~~~~~~~~~~~~ia~dp~~~~~~~~~~ 94 (763)
T 3a0f_A 19 GGGFISGLVAHPTEKDLIYARTDIGGTYRWN--AAK--WEWEPITDFIINNALAGNGANLLGTESIALDPHNPDRLYLAQ 94 (763)
T ss_dssp BCSCEEEEEECSSSTTCEEEEESSSCEEEEE--TTT--TEEEESCTTCBTTCSSSCCCCCCSEEEEECCTTCTTCEEEEE
T ss_pred CCCceeEEEeCCCCCCEEEEEeccCcEEEEC--CCC--CCeeECccCccccccCCCcccccceeEEEECCCCCCEEEEEe
Confidence 4567999999999877787777666654332 221 2222221100 0 12458899999854 3455443
Q ss_pred eC----CCeEEEE-ECCCCCCCCCeeEeccc----CC--CeeEEEecCCCCeEEEEEeCCCcEEEEECCCCCCcceeecC
Q 014472 247 GD----DQYLLIW-DLRTPSVSKPVQSVVAH----QS--EVNCLAFNPFNEWILATGSTDKTVKLFDLRKISTALHTFDS 315 (424)
Q Consensus 247 ~~----dg~i~i~-d~~~~~~~~~~~~~~~~----~~--~v~~i~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~ 315 (424)
+. .....|| ....++..+.+...... .. ....|+++|..+..+.++...+. ||--...++--..+..
T Consensus 95 g~~~~~~~~~~i~~S~DgG~TW~~~~~~~~~~~~~~g~~~~~~l~v~p~~~~~v~a~~~~~~--l~~S~DgG~TW~~~~~ 172 (763)
T 3a0f_A 95 GDYVQWDPWAAFLVSDDRGKTFKQYRSPVPMGANDMGRNGGERLAVNPHWTDELWFGSRTQG--LWRSTDRAQTWSRMNQ 172 (763)
T ss_dssp CSCTTTCSCCEEEEESSTTSSCEEEECSSCCCTTSTTTTSBCCEEECTTSTTCEEEECSSSC--EEEESSTTSSCEECTT
T ss_pred cccccCCCCceEEEECCCCCCceeccCCcccCccccCccccceEEECCCCCCEEEEEeCCCc--EEEECCCCcCcccccc
Confidence 32 1112333 33334432222210000 11 12468888865444555554433 3333322332222221
Q ss_pred ------CCCCEEEEEEcCCCCcEEEEEeCCC
Q 014472 316 ------HKEEVFQVGWNPKNETILASCCLGR 340 (424)
Q Consensus 316 ------~~~~v~~~~~sp~~~~~l~s~~~dg 340 (424)
....+..+.++|..+..++.+..++
T Consensus 173 ~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~ 203 (763)
T 3a0f_A 173 LPDSSTYGIGIISVIFDPKNVGTAYVASHAV 203 (763)
T ss_dssp SCCCSCTTTCEEEEEECSSSTTCEEEEESST
T ss_pred CcccCCCccceEEEEECCCCCCEEEEEEeCC
Confidence 1235788999986544344555443
No 363
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=38.57 E-value=2.7e+02 Score=26.61 Aligned_cols=58 Identities=14% Similarity=0.172 Sum_probs=34.9
Q ss_pred eeEEEecCCCCeEEEEEeCC------------CcEEEEECCCCCCcceeecC-CCCCEEEEEEcCCCCcEEEE
Q 014472 276 VNCLAFNPFNEWILATGSTD------------KTVKLFDLRKISTALHTFDS-HKEEVFQVGWNPKNETILAS 335 (424)
Q Consensus 276 v~~i~~~~~~~~~l~~g~~d------------g~i~iwd~~~~~~~~~~~~~-~~~~v~~~~~sp~~~~~l~s 335 (424)
.-.|+|+|.|. |++.-..+ ..+.+.+..+ ++....+.. ....++.++|+|+++.+++.
T Consensus 478 PDNL~fd~~G~-LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~-g~~~rf~~~P~gaE~TG~~fspDg~tlfvn 548 (592)
T 3zwu_A 478 PDGLGFDKAGR-LWILTDGDSSNAGDFAGMGNNQMLCADPAT-GEIRRFMVGPIGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp EEEEEECTTCC-EEEEECCCCCCSGGGTTTCSCEEEEECTTT-CCEEEEEECCTTCEEEEEEECTTSSEEEEE
T ss_pred CcceEECCCCC-EEEEecCCCcccccccccccceEEEEeCCC-CeEEEEEeCCCCccCcCeeECCCCCEEEEE
Confidence 46789999987 45443322 1234444443 333333333 35689999999999866654
No 364
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=38.15 E-value=78 Score=31.05 Aligned_cols=71 Identities=17% Similarity=0.161 Sum_probs=0.0
Q ss_pred EEEEEEcCCCCcEEEEEeCCCeEEEeeCCCCCcccCCCccCC------------CCCeeeEEEcCCCCCcceEEeCCCCC
Q 014472 320 VFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPEDAED------------GPPELLFIHGGHTSKISDFSWNPCED 387 (424)
Q Consensus 320 v~~~~~sp~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~------------~~~~~~~~~~~h~~~v~~~~~~~~~~ 387 (424)
|.++.+. ..++++-+.|.++|+|++.++........... .+...+..+. -..+.|+|-+.
T Consensus 224 Is~~~~~---~~fLftL~~Dh~LRiWsL~t~~lv~t~DL~~~~~~~~s~L~~~~~~~~~Lrl~~-----~~lv~y~P~~~ 295 (729)
T 3f7f_A 224 ISCKLFH---ERYLIVLTQNCHLKIWDLTSFTLIQDYDMVSQSDSDPSHFRKVEAVGEYLSLYN-----NTLVTLLPLEN 295 (729)
T ss_dssp EEEEEET---TTEEEEEETTCEEEEEETTTTEEEEEEETTTTSCCCSSCCCCCCSCCCCEEESS-----SEEEEEETTTT
T ss_pred EEEeccC---CcEEEEEEcCCeEEEEEcCCCceEEeeccccCccccccccCcccCcchhHhhee-----eEEEEEecCCC
Q ss_pred cEEEEEeCCCcEEEEecCCC
Q 014472 388 WVISSVAEDNILQIWQMAEN 407 (424)
Q Consensus 388 ~~l~s~~~d~~i~iw~~~~~ 407 (424)
. ..++|++...
T Consensus 296 G---------~Fk~~~l~~~ 306 (729)
T 3f7f_A 296 G---------LFQMGTLLVD 306 (729)
T ss_dssp C---------EEEEEEEEC-
T ss_pred C---------eEEEEEEEEc
No 365
>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}
Probab=36.55 E-value=3.2e+02 Score=26.84 Aligned_cols=210 Identities=11% Similarity=0.100 Sum_probs=100.0
Q ss_pred eEE-ecCCCCceEEEEeCCC----cEEEEeCCCCCCCCcccceeeeecCC-----cceeeEEeeCCCCcEEEEE------
Q 014472 183 GLS-WSKFKEGHLLSGSDDA----QICLWDINAAPKNKSLEAMQIFKVHE-----GVVEDVAWHLRHEYLFGSV------ 246 (424)
Q Consensus 183 ~l~-~~~~~~~~l~s~~~dg----~i~vwd~~~~~~~~~~~~~~~~~~~~-----~~v~~i~~~~~~~~~~~s~------ 246 (424)
.+. ++|++...+++-|..| .++++|+.+++....- +. -.... .....++|... ..++++.
T Consensus 133 g~~~~~~~~~~~~~~ls~~G~d~~~~~~~d~~t~~~~~~~--~~-~~~k~~~~~~~~~~~~~W~d~-~~~~~~~~~~~~~ 208 (711)
T 4hvt_A 133 GVSNCFQNPNRYLISMSFGGKDEMFFREWDLEKKDFVKNG--FE-PITNSGKLLEGKFTYPTWINK-DTIIFNLVLHKNE 208 (711)
T ss_dssp EEEECSSSTTEEEEEEEETTCSEEEEEEEETTTTEECTTC--SC-CBCTTCCBCCEETCCEEEEET-TEEEECCCCSTTC
T ss_pred ceeecCCCCCEEEEEeCCCCCceeEEEEEECCcCCcCCCC--cc-cccccccccccccceeeEECC-CEEEEEeCCCCCC
Confidence 344 7787775555544444 5999999887432110 00 00000 01234477633 3455432
Q ss_pred ----eCCCeEEEEECCCCCCCCCeeEecccCCCe-eEEEecCCCCe----EEEEEeCC---CcEEEEECCCCCCcceeec
Q 014472 247 ----GDDQYLLIWDLRTPSVSKPVQSVVAHQSEV-NCLAFNPFNEW----ILATGSTD---KTVKLFDLRKISTALHTFD 314 (424)
Q Consensus 247 ----~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v-~~i~~~~~~~~----~l~~g~~d---g~i~iwd~~~~~~~~~~~~ 314 (424)
+....|+.|.+-+... .-...+......+ .....++++.+ ++++.+.+ ..+.+.|.......+..+.
T Consensus 209 ~~~~~~~~~v~~~~~Gt~~~-~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~ 287 (711)
T 4hvt_A 209 ITSSLYPNSLYIWKRGESIE-KAKKLFEVPKEYIYVSAGKLLSDTISSSLIFISANKDFYNYDNYILDTKYKNLKLQKIN 287 (711)
T ss_dssp BCTTSSBCEEEEEETTSCGG-GCEEEEECCTTSCEEEEEESSCTTTCSSEEEEEEESSSSCEEEEEEECSSSSCEEEECC
T ss_pred cCcCCCCCEEEEEECCCChH-HCeEEeccCCCceEEEEEEecCCCceEEEEEEEEecccCceeEEEEcCCCCCCcceEee
Confidence 1235688888776532 1222333333333 23445566653 45554422 3566667654223333333
Q ss_pred CCCCCEEEEEEcCCCCcEEEEE----------eCCCeEEEeeCCCCCcccCCCccCCCCCeeeEEEcCCCCCcceEEeCC
Q 014472 315 SHKEEVFQVGWNPKNETILASC----------CLGRRLMVWDLSRIDEEQTPEDAEDGPPELLFIHGGHTSKISDFSWNP 384 (424)
Q Consensus 315 ~~~~~v~~~~~sp~~~~~l~s~----------~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~ 384 (424)
..... .+..+..+. +++.. ...+.|...++....... ......+.+.... ....+.++.|..
T Consensus 288 ~~~~~--~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~----~~~~~~~~~~~~~-~~~~l~~~~~~~ 359 (711)
T 4hvt_A 288 MPSDA--TLQGSFKEY-VFWLLRSDWKFKSHNIKAGSLVALHFTDLLKTE----SDKTSLKILFTPT-ANEVFNFISTTK 359 (711)
T ss_dssp SCTTC--EEEEEETTE-EEEECSSCEEETTEEECTTCEEEEEGGGGGSCG----GGCTTCEEEECCC-TTEEEEEEEECS
T ss_pred cCCcc--eEeeeECCE-EEEEECcccccccccCCCCeEEEEECCcccccc----cccccceEEECCC-CCCeEEEEEEEC
Confidence 32222 123444453 44422 235678888886531100 0000112222222 233577888886
Q ss_pred CCCcEEEEEeCCCc--EEEEecCCC
Q 014472 385 CEDWVISSVAEDNI--LQIWQMAEN 407 (424)
Q Consensus 385 ~~~~~l~s~~~d~~--i~iw~~~~~ 407 (424)
+ .++++...++. |.++++.++
T Consensus 360 ~--~l~~~~~~~~~~~l~~~~~~~g 382 (711)
T 4hvt_A 360 D--RVFLATYDNVVAKVVTFTLENE 382 (711)
T ss_dssp S--CEEEEEEETTEEEEEEECEETT
T ss_pred C--EEEEEEEECCEEEEEEEECCCC
Confidence 5 37778777775 566666555
No 366
>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}
Probab=31.87 E-value=3.8e+02 Score=26.30 Aligned_cols=247 Identities=11% Similarity=0.105 Sum_probs=116.1
Q ss_pred eEEE-ecCCCCcEEEEEecC----CeEEEEeCCCCCCCCCCCCCCCCcEEEecCC-----CCeeeEEecCCCCceEEEE-
Q 014472 129 NRAR-YMPQNPFLIATKTVS----AEVYVFDYSKHPSKPPLDGACSPDLRLRGHS-----TEGYGLSWSKFKEGHLLSG- 197 (424)
Q Consensus 129 ~~i~-~~p~~~~~latg~~d----g~v~iwd~~~~~~~~~~~~~~~~~~~~~~h~-----~~v~~l~~~~~~~~~l~s~- 197 (424)
..+. ++|++..++++-+.. ..|+++|+.+..-... ...+ .... .....++|.. +..++++.
T Consensus 132 ~g~~~~~~~~~~~~~~ls~~G~d~~~~~~~d~~t~~~~~~---~~~~----~~k~~~~~~~~~~~~~W~d-~~~~~~~~~ 203 (711)
T 4hvt_A 132 RGVSNCFQNPNRYLISMSFGGKDEMFFREWDLEKKDFVKN---GFEP----ITNSGKLLEGKFTYPTWIN-KDTIIFNLV 203 (711)
T ss_dssp EEEEECSSSTTEEEEEEEETTCSEEEEEEEETTTTEECTT---CSCC----BCTTCCBCCEETCCEEEEE-TTEEEECCC
T ss_pred eceeecCCCCCEEEEEeCCCCCceeEEEEEECCcCCcCCC---Cccc----ccccccccccccceeeEEC-CCEEEEEeC
Confidence 3445 788888665554433 3899999987211110 0000 0000 0113447863 34344432
Q ss_pred ---------eCCCcEEEEeCCCCCCCCcccceeeeecCCcce-eeEEeeCCCCc----EEEEEeCC---CeEEEEECCCC
Q 014472 198 ---------SDDAQICLWDINAAPKNKSLEAMQIFKVHEGVV-EDVAWHLRHEY----LFGSVGDD---QYLLIWDLRTP 260 (424)
Q Consensus 198 ---------~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v-~~i~~~~~~~~----~~~s~~~d---g~i~i~d~~~~ 260 (424)
+.-..|+.|.+.+.... ....+.+....+ .....++++.. ++++.+.+ ..+.+.|....
T Consensus 204 ~~~~~~~~~~~~~~v~~~~~Gt~~~~----~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 279 (711)
T 4hvt_A 204 LHKNEITSSLYPNSLYIWKRGESIEK----AKKLFEVPKEYIYVSAGKLLSDTISSSLIFISANKDFYNYDNYILDTKYK 279 (711)
T ss_dssp CSTTCBCTTSSBCEEEEEETTSCGGG----CEEEEECCTTSCEEEEEESSCTTTCSSEEEEEEESSSSCEEEEEEECSSS
T ss_pred CCCCCcCcCCCCCEEEEEECCCChHH----CeEEeccCCCceEEEEEEecCCCceEEEEEEEEecccCceeEEEEcCCCC
Confidence 12346888888665321 222333322222 23444556653 45554422 34666666532
Q ss_pred CCCCCeeEecccCCCeeEEEecCCCCeEEEEE----------eCCCcEEEEECCCCC------Cccee-ec-CCCCCEEE
Q 014472 261 SVSKPVQSVVAHQSEVNCLAFNPFNEWILATG----------STDKTVKLFDLRKIS------TALHT-FD-SHKEEVFQ 322 (424)
Q Consensus 261 ~~~~~~~~~~~~~~~v~~i~~~~~~~~~l~~g----------~~dg~i~iwd~~~~~------~~~~~-~~-~~~~~v~~ 322 (424)
.. .+..+..... . .+..+..+. +++.. ...+.|...|+.... ..... +. .....+..
T Consensus 280 ~~--~~~~l~~~~~-~-~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 354 (711)
T 4hvt_A 280 NL--KLQKINMPSD-A-TLQGSFKEY-VFWLLRSDWKFKSHNIKAGSLVALHFTDLLKTESDKTSLKILFTPTANEVFNF 354 (711)
T ss_dssp SC--EEEECCSCTT-C-EEEEEETTE-EEEECSSCEEETTEEECTTCEEEEEGGGGGSCGGGCTTCEEEECCCTTEEEEE
T ss_pred CC--cceEeecCCc-c-eEeeeECCE-EEEEECcccccccccCCCCeEEEEECCcccccccccccceEEECCCCCCeEEE
Confidence 21 1222222121 1 122333343 44422 246789999987631 12233 22 22346778
Q ss_pred EEEcCCCCcEEEEEeCCCe--EEEeeCCCCCcccCCCccCCCCCeeeEEEcCCCCCcceEEeCCCCCcEEEEEeC---CC
Q 014472 323 VGWNPKNETILASCCLGRR--LMVWDLSRIDEEQTPEDAEDGPPELLFIHGGHTSKISDFSWNPCEDWVISSVAE---DN 397 (424)
Q Consensus 323 ~~~sp~~~~~l~s~~~dg~--i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~---d~ 397 (424)
+.|..+ .++++...++. |.++++..+.... ..+..+.. .+.+..+...+++..++++.+. -+
T Consensus 355 ~~~~~~--~l~~~~~~~~~~~l~~~~~~~g~~~~----------~~~i~lp~-~~~~~~~~~~~~~~~~~~~~ss~~~P~ 421 (711)
T 4hvt_A 355 ISTTKD--RVFLATYDNVVAKVVTFTLENEQWTK----------PVVLKLPY-QNAIFGMSSYEEEEEALITIENSIVPP 421 (711)
T ss_dssp EEECSS--CEEEEEEETTEEEEEEECEETTEECC----------CEEECCCS-TTCEEEEECCTTCSCEEEEEECSSSCC
T ss_pred EEEECC--EEEEEEEECCEEEEEEEECCCCceEE----------EeccCCCC-CeEEEEEeecCcCCEEEEEEecCCCCC
Confidence 888875 47778888875 5556654331000 00011111 1235555666666655555442 34
Q ss_pred cEEEEecC
Q 014472 398 ILQIWQMA 405 (424)
Q Consensus 398 ~i~iw~~~ 405 (424)
.+..+++.
T Consensus 422 ~~~~~d~~ 429 (711)
T 4hvt_A 422 TIYLWVKT 429 (711)
T ss_dssp EEEEECTT
T ss_pred EEEEEeCC
Confidence 56666654
No 367
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=29.76 E-value=2.8e+02 Score=26.38 Aligned_cols=65 Identities=11% Similarity=0.111 Sum_probs=38.9
Q ss_pred CCeeEEEecCCCCeEEEEEeC------------CCcEEEEECCCCCCcceeecCC-CCCEEEEEEcCCCCcEEEEEeCCC
Q 014472 274 SEVNCLAFNPFNEWILATGST------------DKTVKLFDLRKISTALHTFDSH-KEEVFQVGWNPKNETILASCCLGR 340 (424)
Q Consensus 274 ~~v~~i~~~~~~~~~l~~g~~------------dg~i~iwd~~~~~~~~~~~~~~-~~~v~~~~~sp~~~~~l~s~~~dg 340 (424)
.....|.|+++|. |.++... ...+..++..+ ++....+... ...++.++|+|+++.++++...-|
T Consensus 476 nsPDnL~fd~~G~-LWf~TD~~~~~~g~~~~~gnn~v~~~dp~t-Gel~~fl~~P~~aEpnGiafSPD~ktLfV~vQHPG 553 (592)
T 4a9v_A 476 NSPDGLGFDKAGR-LWILTDGDSSNAGDFAGMGNNQMLCADPAT-GEIRRFMVGPIGCEVTGISFSPDQKTLFVGIQHPG 553 (592)
T ss_dssp CCEEEEEECTTCC-EEEEECCCCCCSGGGTTCCSCEEEEECTTT-CCEEEEEECCTTCEEEEEEECTTSSEEEEEEESTT
T ss_pred CCCCceEECCCCC-EEEEeCCCcCccccccccCCceEEEEeCCC-CeEEEEEeCCCCccccCCEECCCCCEEEEEEeCCC
Confidence 3467899999987 4442221 11455555544 4433333332 457899999999987666654433
No 368
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=26.57 E-value=3.4e+02 Score=24.14 Aligned_cols=156 Identities=11% Similarity=0.037 Sum_probs=78.4
Q ss_pred CeeeEEec---CC---CCceEEEEe-CCCcEEEEeCCCCCCCCcc----cce--eee--ecC----CcceeeEEeeCC--
Q 014472 180 EGYGLSWS---KF---KEGHLLSGS-DDAQICLWDINAAPKNKSL----EAM--QIF--KVH----EGVVEDVAWHLR-- 238 (424)
Q Consensus 180 ~v~~l~~~---~~---~~~~l~s~~-~dg~i~vwd~~~~~~~~~~----~~~--~~~--~~~----~~~v~~i~~~~~-- 238 (424)
-+..+.+. |. +..++..+. ..+.|.|+|+.+++.-+.. .+- ..+ .+. ...+..|+.+|+
T Consensus 153 ~l~di~VD~~~~~~~c~~~~aYItD~~~~gLIVydl~~~~swRv~~~~~~pd~~~~~~i~G~~~~~~~Gi~gIaLsp~~~ 232 (381)
T 3q6k_A 153 YFGGFAVDVANPKGDCSETFVYITNFLRGALFIYDHKKQDSWNVTHPTFKAERPTKFDYGGKEYEFKAGIFGITLGDRDS 232 (381)
T ss_dssp GEEEEEEEESCTTTTSCSEEEEEEETTTTEEEEEETTTTEEEEEECGGGSCCSCEEEEETTEEEEECCCEEEEEECCCCT
T ss_pred ccceEEEecccCCCCCCccEEEEEcCCCCcEEEEECCCCcEEEEccCCCccccCcceEECCEEeEeccCceEEEecCCcC
Confidence 45666665 21 133444443 4678999999876431111 000 001 111 246888899987
Q ss_pred --CCcEEEEEeCCCeEEEEE---CCCCCCCCCeeEeccc--CCCeeEEEecCCCCeEEEEEeCCCcEEEEECCC-CC--C
Q 014472 239 --HEYLFGSVGDDQYLLIWD---LRTPSVSKPVQSVVAH--QSEVNCLAFNPFNEWILATGSTDKTVKLFDLRK-IS--T 308 (424)
Q Consensus 239 --~~~~~~s~~~dg~i~i~d---~~~~~~~~~~~~~~~~--~~~v~~i~~~~~~~~~l~~g~~dg~i~iwd~~~-~~--~ 308 (424)
++.++...-....+.-.. ++.......+..+... .+.-..++.++....++++--....|..|+... .- .
T Consensus 233 ~~~~~LYf~plss~~ly~V~T~~L~~~~~~~~v~~~G~kg~~s~~~~~~~D~~~G~ly~~~~~~~aI~~w~~~~~~~~~~ 312 (381)
T 3q6k_A 233 EGNRPAYYLAGSAIKVYSVNTKELKQKGGKLNPELLGNRGKYNDAIALAYDPKTKVIFFAEANTKQVSCWNTQKMPLRMK 312 (381)
T ss_dssp TSCCEEEEEESSCSEEEEEEHHHHSSTTCCCCCEEEEECCTTCCEEEEEECTTTCEEEEEESSSSEEEEEETTSCSBCGG
T ss_pred CCCeEEEEEECCCCcEEEEEHHHhhCcchhhceEEeeecCCCCCcceEEEeCCCCeEEEEeccCCeEEEEeCCCCccccC
Confidence 666665544444444443 2333222233333221 133445677643444677777788999999875 21 1
Q ss_pred cceeec--CCCCCEEEEEEcCCCCcEEEEE
Q 014472 309 ALHTFD--SHKEEVFQVGWNPKNETILASC 336 (424)
Q Consensus 309 ~~~~~~--~~~~~v~~~~~sp~~~~~l~s~ 336 (424)
....+. ..-..+..+.+.+++. +.+..
T Consensus 313 n~~~l~~d~~l~~pd~~~i~~~g~-Lwv~s 341 (381)
T 3q6k_A 313 NTDVVYTSSRFVFGTDISVDSKGG-LWFMS 341 (381)
T ss_dssp GEEEEEECTTCCSEEEEEECTTSC-EEEEE
T ss_pred ceEEEEECCCccccCeEEECCCCe-EEEEE
Confidence 112211 1123466777766664 44433
No 369
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=26.34 E-value=2.9e+02 Score=26.41 Aligned_cols=20 Identities=10% Similarity=0.351 Sum_probs=16.4
Q ss_pred CCCcceEEeCCCCCcEEEEE
Q 014472 374 TSKISDFSWNPCEDWVISSV 393 (424)
Q Consensus 374 ~~~v~~~~~~~~~~~~l~s~ 393 (424)
...++.++|+|+++.|++..
T Consensus 530 gaE~TG~~fspDg~tlfvni 549 (592)
T 3zwu_A 530 GCEVTGISFSPDQKTLFVGI 549 (592)
T ss_dssp TCEEEEEEECTTSSEEEEEE
T ss_pred CccCcCeeECCCCCEEEEEE
Confidence 45799999999999777664
No 370
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=25.22 E-value=6e+02 Score=26.52 Aligned_cols=38 Identities=21% Similarity=0.326 Sum_probs=27.6
Q ss_pred CeeEEEecCCCCeEEEEEeCCCcEEEEECCCCCCcceeec
Q 014472 275 EVNCLAFNPFNEWILATGSTDKTVKLFDLRKISTALHTFD 314 (424)
Q Consensus 275 ~v~~i~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~ 314 (424)
.+.+++..++.. ++++-+.|+++|+|++.+ +.++.+..
T Consensus 239 ~~vs~~~~~~~~-~lftL~~D~~LRiWsl~t-~~~v~t~D 276 (1139)
T 4fhn_B 239 TIISMIFLSTYN-VLVMLSLDYKLKVLDLST-NQCVETIE 276 (1139)
T ss_dssp CBSCCEEETTTT-EEEEEBTTCEEEEEETTT-TEEEEEEE
T ss_pred eeEEeeccCCcc-EEEEEeCCCEEEEEECCC-CCeEEeec
Confidence 345555666666 688899999999999998 66655543
No 371
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=21.22 E-value=3.6e+02 Score=22.51 Aligned_cols=222 Identities=14% Similarity=0.131 Sum_probs=118.4
Q ss_pred ceeEEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCCeeeEEecCCCCceEEEEeCCCcEEEE
Q 014472 127 EVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDDAQICLW 206 (424)
Q Consensus 127 ~v~~i~~~p~~~~~latg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vw 206 (424)
.|..|+.-.. +.++. . ||.|+.|-....... ..+. .....|..++-.... .++. . ||.|..|
T Consensus 25 ~i~~ia~G~~--h~~~l-~-~G~v~~wG~n~~Gql------g~p~----~~~~~i~~ia~G~~h--s~~l-~-~G~v~~w 86 (282)
T 3qhy_B 25 GVDAIAGGYF--HGLAL-K-GGKVLGWGANLNGQL------TMPA----ATQSGVDAIAAGNYH--SLAL-K-DGEVIAW 86 (282)
T ss_dssp SCCEEEECSS--EEEEE-E-TTEEEEEECCSSSTT------SCCG----GGGSCCCEEEECSSE--EEEE-E-TTEEEEE
T ss_pred CCcEEEeCCC--eEEEE-E-CCEEEEEeCCCCCCC------CCCc----cCCCCEEEEEeCCCE--EEEE-E-CCEEEEe
Confidence 4666666543 34444 4 899999987652111 0111 112356666654322 2443 4 8999999
Q ss_pred eCCCCCCCCcccceeeeecCCcceeeEEeeCCCCcEEEEEeCCCeEEEEECCCCCCCCCeeEecccCCCeeEEEecCCCC
Q 014472 207 DINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNE 286 (424)
Q Consensus 207 d~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~ 286 (424)
-.+....... +. .-...|..|+.... +.+ +-. +|.|+.|-........ ........|..|+....
T Consensus 87 G~n~~Gqlg~--P~----~~~~~v~~ia~G~~--hs~-al~-~G~v~~wG~n~~gqlg---~~~~~~~~i~~i~~G~~-- 151 (282)
T 3qhy_B 87 GGNEDGQTTV--PA----EARSGVDAIAAGAW--ASY-ALK-DGKVIAWGDDSDGQTT---VPAEAQSGVTALDGGVY-- 151 (282)
T ss_dssp ECCTTSTTCC--CG----GGSSSEEEEEEETT--EEE-EEE-TTEEEEEECCTTSTTS---CCGGGGSSEEEEEECSS--
T ss_pred eCCCCCCCCC--Cc----ccCCCeEEEECcCC--EEE-EEe-CCeEEEecCCCCCcCC---CCccCCCCeEEEEcccC--
Confidence 8765422211 10 11346777776543 233 445 9999999776533211 11122356777776542
Q ss_pred eEEEEEeCCCcEEEEECCCCCCcceeecCCCCCEEEEEEcCCCCcEEEEEeCCCeEEEeeCCCCCcccCCCccCCCCCee
Q 014472 287 WILATGSTDKTVKLFDLRKISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPEDAEDGPPEL 366 (424)
Q Consensus 287 ~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~ 366 (424)
+.++. . ||.|..|-....++.-.... -...|..++.-... .++. .||.|..|=.....+.-.. ..
T Consensus 152 ~~~~l-~-~G~v~~wG~n~~gqlg~p~~-~~~~v~~i~~G~~h--s~al--~~G~v~~wG~n~~gqlg~p-------~~- 216 (282)
T 3qhy_B 152 TALAV-K-NGGVIAWGDNYFGQTTVPAE-AQSGVDDVAGGIFH--SLAL--KDGKVIAWGDNRYKQTTVP-------TE- 216 (282)
T ss_dssp EEEEE-E-TTEEEEEECCTTSTTSCCGG-GGSSEEEEEECSSE--EEEE--ETTEEEEEECCTTSTTCCC-------GG-
T ss_pred EEEEE-E-CCEEEEecCCCCCCCCCcee-cCCCeEEEEecCCE--EEEE--ECCeEEEEECCCCCCCCCC-------cc-
Confidence 23433 3 79999998765333211111 13567788776543 3444 5999999977654332111 00
Q ss_pred eEEEcCCCCCcceEEeCCCCCcEEEEEeCCCcEEEEecCC
Q 014472 367 LFIHGGHTSKISDFSWNPCEDWVISSVAEDNILQIWQMAE 406 (424)
Q Consensus 367 ~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iw~~~~ 406 (424)
....|..++-..... ++.. ||.|..|=-..
T Consensus 217 ------~~~~v~~i~~G~~h~--~al~--~g~v~~wG~n~ 246 (282)
T 3qhy_B 217 ------ALSGVSAIASGEWYS--LALK--NGKVIAWGSSR 246 (282)
T ss_dssp ------GGSSCCEEEECSSCE--EEEE--TTEEEEESTTC
T ss_pred ------cCCCceEEEcCCCEE--EEEE--CCEEEEecCCC
Confidence 012466666554433 3332 88888886654
No 372
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=21.20 E-value=5.4e+02 Score=24.51 Aligned_cols=21 Identities=10% Similarity=0.355 Sum_probs=17.1
Q ss_pred CCcceEEeCCCCCcEEEEEeC
Q 014472 375 SKISDFSWNPCEDWVISSVAE 395 (424)
Q Consensus 375 ~~v~~~~~~~~~~~~l~s~~~ 395 (424)
..++.++|+||++.|+++.-.
T Consensus 531 aEpnGiafSPD~ktLfV~vQH 551 (592)
T 4a9v_A 531 CEVTGISFSPDQKTLFVGIQH 551 (592)
T ss_dssp CEEEEEEECTTSSEEEEEEES
T ss_pred ccccCCEECCCCCEEEEEEeC
Confidence 468999999999987777643
No 373
>3kci_A Probable E3 ubiquitin-protein ligase HERC2; WD40, RCC1, structural genomics consortium, SGC, coiled coil, metal-binding, phosphoprotein; 1.80A {Homo sapiens}
Probab=20.65 E-value=4.4e+02 Score=23.21 Aligned_cols=251 Identities=14% Similarity=0.063 Sum_probs=116.4
Q ss_pred EEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcE---EEec-CCCCeeeEEecCCCCceEEEEeCCCcEEEEeCCCCCCC-
Q 014472 140 LIATKTVSAEVYVFDYSKHPSKPPLDGACSPDL---RLRG-HSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKN- 214 (424)
Q Consensus 140 ~latg~~dg~v~iwd~~~~~~~~~~~~~~~~~~---~~~~-h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~- 214 (424)
..+.-..+|.|+.|-......... +...... .+.. ....+..++.+. +....+.-..||.|..|-.......
T Consensus 64 ~~~~l~~~G~v~~wG~n~~GqLG~--g~~~~~~~p~~v~~~~~~~~~~v~i~~-G~~h~~al~~~G~v~~wG~n~~GqLG 140 (389)
T 3kci_A 64 TLFAVTADGKLYATGYGAGGRLGI--GGTESVSTPTLLESIQHVFIKKVAVNS-GGKHCLALSSEGEVYSWGEAEDGKLG 140 (389)
T ss_dssp EEEEEETTSCEEEEECCGGGTTSS--SSSCCEEEEEECGGGTTSCEEEEEECT-TCSEEEEEETTSCEEEEECCGGGTTC
T ss_pred eEEEEcCCCcEEEEECCCCCCCCC--CCcCCccCCEEcccccCCceeEEEECc-CCCeEEEEcCCCCEEEEeCCCCCcCC
Confidence 344446789999997654211000 0001111 1111 112334455544 3335666678999999965432111
Q ss_pred -----Ccccceeeeec-CCcceeeEEeeCCCCcEEEEEeCCCeEEEEECCCCCCC-----CCe---eEec-ccCCCeeEE
Q 014472 215 -----KSLEAMQIFKV-HEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVS-----KPV---QSVV-AHQSEVNCL 279 (424)
Q Consensus 215 -----~~~~~~~~~~~-~~~~v~~i~~~~~~~~~~~s~~~dg~i~i~d~~~~~~~-----~~~---~~~~-~~~~~v~~i 279 (424)
....+ ..+.. ....|..|+.-. ...++...+|.|+.|-....... ... ..+. .....|..+
T Consensus 141 ~g~~~~~~~p-~~v~~l~~~~i~~va~G~---~hs~alt~~G~v~~wG~n~~GqLG~~~~~~~~~p~~v~~~~~~~v~~i 216 (389)
T 3kci_A 141 HGNRSPCDRP-RVIESLRGIEVVDVAAGG---AHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDI 216 (389)
T ss_dssp SSSCCCEEEE-EECGGGTTSCEEEEEECS---SEEEEEETTSCEEEEECCGGGTTCSSSCCCEEEEEECGGGTTSCEEEE
T ss_pred CCCCccCcCC-eEecccCCCeEEEEEeCc---CeEEEEeCCCeEEEeCCCCCCCcCCCCCcccccceEecccCCCeEEEE
Confidence 11111 11111 122566665432 23345678999999965431100 000 1111 123356677
Q ss_pred EecCCCCeEEEEEeCCCcEEEEECCCCCCc----------ceeec-CCCCCEEEEEEcCCCCcEEEEEeCCCeEEEeeCC
Q 014472 280 AFNPFNEWILATGSTDKTVKLFDLRKISTA----------LHTFD-SHKEEVFQVGWNPKNETILASCCLGRRLMVWDLS 348 (424)
Q Consensus 280 ~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~----------~~~~~-~~~~~v~~~~~sp~~~~~l~s~~~dg~i~iwd~~ 348 (424)
+...... ..+.-..+|.|..|-....++. ...+. .....|..++.-.. ..++-..+|.|..|=..
T Consensus 217 a~G~g~~-~t~~l~~~G~v~~wG~n~~GqLG~g~~~~~~~p~~v~~~~~~~v~~v~~G~~---hs~alt~~G~v~~wG~n 292 (389)
T 3kci_A 217 ACGSGDA-QTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQ---FSVALTKSGAVYTWGKG 292 (389)
T ss_dssp EECCSSC-EEEEEETTTEEEEEECCGGGTTSSSSCCCEEEEEECGGGTTSCEEEEEEETT---EEEEEETTSCEEEEECC
T ss_pred EEcCCCc-EEEEEccCCEEEEEeCCCCCCCCCCCCCCccccEEecccCCCcEEEEeCCCC---EEEEEeCCCeEEEEeCC
Confidence 6643223 3445567899999975432211 11111 12235666766443 34455789999999765
Q ss_pred CCCcccCCCccCCCCCeeeEEEcCCCCCcceEEeCCCCCcEEEEEeCCCcEEEEecCC
Q 014472 349 RIDEEQTPEDAEDGPPELLFIHGGHTSKISDFSWNPCEDWVISSVAEDNILQIWQMAE 406 (424)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iw~~~~ 406 (424)
...+.-.-.. .....+.....-....|..++.... ..+....||.|..|=...
T Consensus 293 ~~GqLG~g~~--~~~~~P~~v~~l~~~~v~~ia~G~~---h~~al~~~G~v~~wG~n~ 345 (389)
T 3kci_A 293 DYHRLGHGSD--DHVRRPRQVQGLQGKKVIAIATGSL---HCVCCTEDGEVYTWGDND 345 (389)
T ss_dssp GGGTTCSSSC--CCEEEEEECGGGTTCCEEEEEECSS---EEEEEETTCCEEEEECCT
T ss_pred CCCCCCCCCC--ccccCCeEeccCCCCCEEEEEeccC---eEEEECCCCCEEEeeCCC
Confidence 4322110000 0000111110111123556655433 334446789999997754
Done!