Query 014473
Match_columns 424
No_of_seqs 321 out of 2884
Neff 8.2
Searched_HMMs 46136
Date Fri Mar 29 05:29:21 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/014473.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/014473hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0543 FKBP-type peptidyl-pro 100.0 7.3E-40 1.6E-44 316.0 20.0 224 161-417 1-227 (397)
2 KOG0549 FKBP-type peptidyl-pro 100.0 1.2E-32 2.6E-37 237.8 16.9 176 200-384 1-179 (188)
3 KOG0549 FKBP-type peptidyl-pro 100.0 1.3E-29 2.9E-34 219.0 15.7 171 81-259 1-177 (188)
4 KOG0543 FKBP-type peptidyl-pro 100.0 8.8E-29 1.9E-33 239.3 20.0 186 37-258 1-190 (397)
5 KOG0544 FKBP-type peptidyl-pro 100.0 3.5E-28 7.5E-33 186.0 11.9 107 268-381 2-108 (108)
6 KOG0544 FKBP-type peptidyl-pro 99.9 6.1E-27 1.3E-31 179.2 11.0 107 30-144 2-108 (108)
7 COG0545 FkpA FKBP-type peptidy 99.9 6.1E-27 1.3E-31 207.1 12.0 114 20-144 92-205 (205)
8 COG0545 FkpA FKBP-type peptidy 99.9 1.9E-26 4.2E-31 203.9 12.5 107 264-380 98-204 (205)
9 PRK11570 peptidyl-prolyl cis-t 99.9 4.2E-23 9.1E-28 188.6 13.8 113 20-143 93-205 (206)
10 KOG0552 FKBP-type peptidyl-pro 99.9 1.2E-22 2.6E-27 184.3 12.7 117 17-144 108-226 (226)
11 TIGR03516 ppisom_GldI peptidyl 99.9 8.5E-22 1.8E-26 175.8 13.6 111 24-144 64-176 (177)
12 PRK11570 peptidyl-prolyl cis-t 99.9 3.2E-21 6.9E-26 176.3 14.0 107 264-380 99-205 (206)
13 PRK10902 FKBP-type peptidyl-pr 99.9 6.1E-21 1.3E-25 180.7 14.1 116 20-147 137-252 (269)
14 KOG0552 FKBP-type peptidyl-pro 99.8 9.1E-21 2E-25 172.1 12.6 108 264-380 117-225 (226)
15 TIGR03516 ppisom_GldI peptidyl 99.8 2.2E-20 4.8E-25 166.7 14.0 111 264-381 66-176 (177)
16 PF00254 FKBP_C: FKBP-type pep 99.8 4.3E-19 9.4E-24 142.8 11.9 94 41-141 1-94 (94)
17 PRK10902 FKBP-type peptidyl-pr 99.8 8.5E-19 1.9E-23 166.1 14.8 109 264-383 143-251 (269)
18 PF00254 FKBP_C: FKBP-type pep 99.8 6.6E-19 1.4E-23 141.8 11.1 91 284-378 3-94 (94)
19 PRK15095 FKBP-type peptidyl-pr 99.6 2.6E-14 5.7E-19 125.3 15.1 84 44-143 4-87 (156)
20 PRK15095 FKBP-type peptidyl-pr 99.6 1.6E-14 3.5E-19 126.6 10.0 71 286-360 5-75 (156)
21 COG1047 SlpA FKBP-type peptidy 99.6 5.3E-14 1.1E-18 122.9 13.1 85 44-144 2-86 (174)
22 KOG0545 Aryl-hydrocarbon recep 99.5 9.1E-16 2E-20 139.3 0.6 153 265-421 8-201 (329)
23 PRK10737 FKBP-type peptidyl-pr 99.5 4.8E-13 1E-17 120.5 13.5 83 44-143 2-84 (196)
24 COG1047 SlpA FKBP-type peptidy 99.4 7E-13 1.5E-17 116.0 10.2 71 286-360 3-73 (174)
25 PRK10737 FKBP-type peptidyl-pr 99.4 1.6E-12 3.5E-17 117.2 9.8 70 286-360 3-72 (196)
26 TIGR00115 tig trigger factor. 98.8 6E-08 1.3E-12 98.8 12.5 86 286-383 147-232 (408)
27 PRK01490 tig trigger factor; P 98.7 1.2E-07 2.5E-12 97.5 12.6 86 286-383 158-243 (435)
28 TIGR00115 tig trigger factor. 98.7 6.4E-08 1.4E-12 98.6 8.8 98 45-158 147-244 (408)
29 COG0544 Tig FKBP-type peptidyl 98.6 1.9E-07 4.2E-12 94.9 10.4 92 287-391 159-250 (441)
30 PRK01490 tig trigger factor; P 98.6 1.8E-07 4E-12 96.0 8.8 94 45-154 158-251 (435)
31 COG0544 Tig FKBP-type peptidyl 98.5 2.7E-07 5.8E-12 93.9 7.5 97 45-157 158-254 (441)
32 KOG0545 Aryl-hydrocarbon recep 97.5 3.3E-05 7.1E-10 71.2 1.2 82 25-110 6-90 (329)
33 PF09122 DUF1930: Domain of un 62.2 8.4 0.00018 27.9 2.6 23 209-231 35-57 (68)
34 TIGR00990 3a0801s09 mitochondr 57.2 3 6.6E-05 44.8 -0.5 56 364-420 94-149 (615)
35 KOG4648 Uncharacterized conser 52.6 4.6 0.0001 39.8 -0.0 34 389-422 88-121 (536)
36 KOG0551 Hsp90 co-chaperone CNS 26.9 13 0.00027 36.7 -1.5 27 396-422 79-105 (390)
37 cd04331 RNAP_E_N RNAP_E_N: Rpo 21.0 2.1E+02 0.0045 21.9 4.5 48 373-420 2-50 (80)
38 PHA02122 hypothetical protein 21.0 1.6E+02 0.0035 20.9 3.4 20 46-66 39-58 (65)
39 KOG0547 Translocase of outer m 20.9 30 0.00064 35.9 -0.3 36 387-422 104-139 (606)
No 1
>KOG0543 consensus FKBP-type peptidyl-prolyl cis-trans isomerase [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=7.3e-40 Score=315.97 Aligned_cols=224 Identities=36% Similarity=0.543 Sum_probs=204.1
Q ss_pred ecCCCcCCCCCCcEEEEEEEEEeCCCcEEeeccCCcCEEEEeCCCCcchhHHHHHhccccccEEEEEEecccccCCCCCC
Q 014473 161 NEGQGWETPRAPYEVKAWISAKTGDGKLILSHREGEPYFFTFGKSEVPKGLEMGIGTMTREEKAVIYVTSQYLTPSPLMP 240 (424)
Q Consensus 161 ~~g~g~~~p~~gd~v~v~y~~~~~dg~~~~s~~~~~p~~~~~g~~~~~~gl~~~l~~M~~Ge~a~~~vp~~~~~g~~~~~ 240 (424)
++|+|+.+|..|+.|.+||+++++||+.|+|+.++.|+.|.+|.|+++.||+.++.+|+.|+. +.++
T Consensus 1 ~eg~g~~~p~~g~~v~~hytg~l~dgt~fdss~d~~~~~~~lg~g~vi~~~~~gv~tm~~g~~-------------~~pp 67 (397)
T KOG0543|consen 1 KEGTGTETPMTGDKVEVHYTGTLLDGTKFDSSRDGDPFKFDLGKGSVIKGWDLGVATMKKGEA-------------GSPP 67 (397)
T ss_pred CCCCCccCCCCCceeEEEEeEEecCCeecccccCCCceeeecCCCcccccccccccccccccc-------------CCCC
Confidence 368999999999999999999999999999988899999999999999999999999998443 4778
Q ss_pred CcCCCceEEEEEEEEEEEEeeeecCCCceEEEEEeCCCCCCCCCCCCCCCeEEEEEEEEEeCCCCcEEEeecCCCCCCCe
Q 014473 241 VVEGCEEVHFEVELVHLIQVRDMLGDGRLIKRRIRDGKGEFPMDCPLHDSLLCVHYKGMLLNEEKKVFYDTRVDNDGQPL 320 (424)
Q Consensus 241 ~ip~~~~l~~~vel~~~~~~~d~~~d~~v~k~il~~G~G~~~~~~p~~g~~V~v~y~g~~~~~~g~~f~ds~~~~~~~p~ 320 (424)
.+|++++|.|+|+|+ |++|+|+|+++|.|. .++|..|..|.+||.|++.+ + +| +.+ ...|
T Consensus 68 ~ip~~a~l~fe~el~----------Dg~iiKriir~G~gd--~~~P~~g~~V~v~~~G~~~~--~-~f-~~~----~~~f 127 (397)
T KOG0543|consen 68 KIPSNATLLFEVELL----------DGGIIKRIIREGEGD--YSRPNKGAVVKVHLEGELED--G-VF-DQR----ELRF 127 (397)
T ss_pred CCCCCcceeeeeccc----------CCceEEeeeecCCCC--CCCCCCCcEEEEEEEEEECC--c-ce-ecc----ccce
Confidence 999999999999998 899999999999996 26799999999999999976 4 78 443 3458
Q ss_pred EEEeCC-CCcchhHHHHHhccCCCcEEEEEecCCCccc-CCCCCCCCCCCCeEEEEEEEEeee-cCCCCCCCCHhhHHHH
Q 014473 321 EFSSGE-GLVPEGFEMCVRLMLPGEIALVTCPPDYAYD-KFLRPANVPEGAHIQWEIELLGFE-KPKDWTGLSFDGIMDE 397 (424)
Q Consensus 321 ~~~lG~-~~~~~gle~~L~~m~~Ge~~~i~ip~~~~yg-~~~~~~~ip~~~~l~f~Vel~~~~-~~~~~~~~~~~e~l~~ 397 (424)
.|.+|+ ..++.||+.+|..|++||++.|+|+|+|+|| ..+.++.|||+++|.|+|+|++|. +..+.|.|..+||+++
T Consensus 128 e~~~Ge~~~vi~Gle~al~~M~~GE~a~v~i~~~YayG~~~~~~p~IPPnA~l~yEVeL~~f~~~~~~s~~~~~~e~l~~ 207 (397)
T KOG0543|consen 128 EFGEGEDIDVIEGLEIALRMMKVGEVALVTIDPKYAYGEEGGEPPLIPPNATLLYEVELLDFELKEDESWKMFAEERLEA 207 (397)
T ss_pred EEecCCccchhHHHHHHHHhcCccceEEEEeCcccccCCCCCCCCCCCCCceEEEEEEEEeeecCcccccccchHHHHHH
Confidence 888888 5799999999999999999999999999999 445667899999999999999999 8889999999999999
Q ss_pred HHHhhhcccccccccceeEe
Q 014473 398 AEKIRVTVCTLGPFIYFMMI 417 (424)
Q Consensus 398 a~~~k~~gn~~~~~~~~~~~ 417 (424)
|.++|++||.++...-|.-|
T Consensus 208 A~~~ke~Gn~~fK~gk~~~A 227 (397)
T KOG0543|consen 208 ADRKKERGNVLFKEGKFKLA 227 (397)
T ss_pred HHHHHHhhhHHHhhchHHHH
Confidence 99999999999998887644
No 2
>KOG0549 consensus FKBP-type peptidyl-prolyl cis-trans isomerase [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=1.2e-32 Score=237.85 Aligned_cols=176 Identities=23% Similarity=0.336 Sum_probs=151.9
Q ss_pred EEeCCCCcchhHHHHHhccccccEEEEEEecccccCCCCCCCcCCCceEEEEEEEEEEEEe---eeecCCCceEEEEEeC
Q 014473 200 FTFGKSEVPKGLEMGIGTMTREEKAVIYVTSQYLTPSPLMPVVEGCEEVHFEVELVHLIQV---RDMLGDGRLIKRRIRD 276 (424)
Q Consensus 200 ~~~g~~~~~~gl~~~l~~M~~Ge~a~~~vp~~~~~g~~~~~~ip~~~~l~~~vel~~~~~~---~d~~~d~~v~k~il~~ 276 (424)
|++|.+.+++|+++++.+|+.||++.+.+||+++||.+.. ..-..++|.+.++.+... +....+..+...++++
T Consensus 1 ~~~g~~~vi~gm~~~~~g~c~ge~rkvv~pp~l~fg~~~~---~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~I~v~~~ 77 (188)
T KOG0549|consen 1 FTLGQGFVIPGMDQALEGMCNGEKRKVVIPPHLGFGEGGR---GDLNILVITILLVLLFRASAAEKWNPDEELQIGVLKK 77 (188)
T ss_pred CcccceEEecCHHHHhhhhhccccceeccCCccccccccc---ccccceEEEeeeeehhhhhhhhhcCCCCceeEEEEEC
Confidence 3578899999999999999999999999999999995322 222346777877776553 3445678888888888
Q ss_pred CCCCCCCCCCCCCCeEEEEEEEEEeCCCCcEEEeecCCCCCCCeEEEeCCCCcchhHHHHHhccCCCcEEEEEecCCCcc
Q 014473 277 GKGEFPMDCPLHDSLLCVHYKGMLLNEEKKVFYDTRVDNDGQPLEFSSGEGLVPEGFEMCVRLMLPGEIALVTCPPDYAY 356 (424)
Q Consensus 277 G~G~~~~~~p~~g~~V~v~y~g~~~~~~g~~f~ds~~~~~~~p~~~~lG~~~~~~gle~~L~~m~~Ge~~~i~ip~~~~y 356 (424)
-+.. ...++.||.+.+||++.+.| |++| ||||. +++|++|.||.+++|+||+++|.+|++||++++.|||++||
T Consensus 78 p~~C--~~kak~GD~l~~HY~g~leD--Gt~f-dSS~~-rg~P~~f~LG~gqVIkG~Dqgl~gMCvGEkRkl~IPp~LgY 151 (188)
T KOG0549|consen 78 PEEC--PEKAKKGDTLHVHYTGSLED--GTKF-DSSYS-RGAPFTFTLGTGQVIKGWDQGLLGMCVGEKRKLIIPPHLGY 151 (188)
T ss_pred Cccc--cccccCCCEEEEEEEEEecC--CCEE-eeecc-CCCCEEEEeCCCceeccHhHHhhhhCcccceEEecCccccC
Confidence 4442 24578999999999999988 9999 99998 79999999999999999999999999999999999999999
Q ss_pred cCCCCCCCCCCCCeEEEEEEEEeeecCC
Q 014473 357 DKFLRPANVPEGAHIQWEIELLGFEKPK 384 (424)
Q Consensus 357 g~~~~~~~ip~~~~l~f~Vel~~~~~~~ 384 (424)
|++|.++.||++++|+|+|||+++.+..
T Consensus 152 G~~G~~~~IP~~A~LiFdiELv~i~~~~ 179 (188)
T KOG0549|consen 152 GERGAPPKIPGDAVLIFDIELVKIERGP 179 (188)
T ss_pred ccCCCCCCCCCCeeEEEEEEEEEeecCC
Confidence 9999988899999999999999998853
No 3
>KOG0549 consensus FKBP-type peptidyl-prolyl cis-trans isomerase [Posttranslational modification, protein turnover, chaperones]
Probab=99.97 E-value=1.3e-29 Score=219.01 Aligned_cols=171 Identities=21% Similarity=0.307 Sum_probs=141.1
Q ss_pred EEcCCCcchhhHHHHhcCCCCCcEEEEEEccCcccCCCCCCCCCCCCCCccccceeeeeeeeeeccceec---cccceeE
Q 014473 81 HVLGKSKILLGLLEGIPTMLKGEVSMFKMKPQMHYGEDDCPVAAPSTFPKDEELHFEIEMIDFAKAKIIA---DDFGVVK 157 (424)
Q Consensus 81 ~~lG~~~~i~gle~al~~m~~Ge~~~i~ip~~~~yg~~g~~~~~~~~ip~~~~l~~~iel~~i~~~~~~~---~D~~v~k 157 (424)
|.+|.+.++++++.+|.+|+.|+++++.+||+++||..+.. .-..++|.+.++.+....... .+..+-.
T Consensus 1 ~~~g~~~vi~gm~~~~~g~c~ge~rkvv~pp~l~fg~~~~~--------~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~I 72 (188)
T KOG0549|consen 1 FTLGQGFVIPGMDQALEGMCNGEKRKVVIPPHLGFGEGGRG--------DLNILVITILLVLLFRASAAEKWNPDEELQI 72 (188)
T ss_pred CcccceEEecCHHHHhhhhhccccceeccCCcccccccccc--------cccceEEEeeeeehhhhhhhhhcCCCCceeE
Confidence 35678899999999999999999999999999999965542 234567777776655432211 2233333
Q ss_pred EEeec-CCCcCCCCCCcEEEEEEEEEeCCCcEEeec-cCCcCEEEEeCCCCcchhHHHHHhccccccEEEEEEecccccC
Q 014473 158 KVINE-GQGWETPRAPYEVKAWISAKTGDGKLILSH-REGEPYFFTFGKSEVPKGLEMGIGTMTREEKAVIYVTSQYLTP 235 (424)
Q Consensus 158 ~i~~~-g~g~~~p~~gd~v~v~y~~~~~dg~~~~s~-~~~~p~~~~~g~~~~~~gl~~~l~~M~~Ge~a~~~vp~~~~~g 235 (424)
.++.+ -.+..+.+.||.+.+||++.+.||++|||+ .++.|+.|++|.+++|+|||+||.+||+||++++.|||+++||
T Consensus 73 ~v~~~p~~C~~kak~GD~l~~HY~g~leDGt~fdSS~~rg~P~~f~LG~gqVIkG~Dqgl~gMCvGEkRkl~IPp~LgYG 152 (188)
T KOG0549|consen 73 GVLKKPEECPEKAKKGDTLHVHYTGSLEDGTKFDSSYSRGAPFTFTLGTGQVIKGWDQGLLGMCVGEKRKLIIPPHLGYG 152 (188)
T ss_pred EEEECCccccccccCCCEEEEEEEEEecCCCEEeeeccCCCCEEEEeCCCceeccHhHHhhhhCcccceEEecCccccCc
Confidence 33333 337788999999999999999999999994 4688999999999999999999999999999999999999999
Q ss_pred CC-CCCCcCCCceEEEEEEEEEEEE
Q 014473 236 SP-LMPVVEGCEEVHFEVELVHLIQ 259 (424)
Q Consensus 236 ~~-~~~~ip~~~~l~~~vel~~~~~ 259 (424)
+. .++.||+++.|.|+|||+.+.+
T Consensus 153 ~~G~~~~IP~~A~LiFdiELv~i~~ 177 (188)
T KOG0549|consen 153 ERGAPPKIPGDAVLIFDIELVKIER 177 (188)
T ss_pred cCCCCCCCCCCeeEEEEEEEEEeec
Confidence 94 5677999999999999999875
No 4
>KOG0543 consensus FKBP-type peptidyl-prolyl cis-trans isomerase [Posttranslational modification, protein turnover, chaperones]
Probab=99.96 E-value=8.8e-29 Score=239.26 Aligned_cols=186 Identities=32% Similarity=0.547 Sum_probs=169.8
Q ss_pred ecCCCCCCCCCCCEEEEEEEEEecCCcEEEecccCCCCCCccEEEEcCCCcchhhHHHHhcCCCCCcEEEEEEccCcccC
Q 014473 37 RPGGGDSTPSDGDQVAYHCTVRTLDGVIVESTRSEYGGKGIPIRHVLGKSKILLGLLEGIPTMLKGEVSMFKMKPQMHYG 116 (424)
Q Consensus 37 ~~G~G~~~p~~gd~V~i~Y~~~~~dG~~~dst~~~~~~~~~p~~~~lG~~~~i~gle~al~~m~~Ge~~~i~ip~~~~yg 116 (424)
++|.|...|..||.|.+||++++.||+.||||.+ +.|+.|.+|.++++.||..++..|+. |
T Consensus 1 ~eg~g~~~p~~g~~v~~hytg~l~dgt~fdss~d-----~~~~~~~lg~g~vi~~~~~gv~tm~~--------------g 61 (397)
T KOG0543|consen 1 KEGTGTETPMTGDKVEVHYTGTLLDGTKFDSSRD-----GDPFKFDLGKGSVIKGWDLGVATMKK--------------G 61 (397)
T ss_pred CCCCCccCCCCCceeEEEEeEEecCCeecccccC-----CCceeeecCCCccccccccccccccc--------------c
Confidence 4789998899999999999999999999999986 67999999999999999999999998 5
Q ss_pred CCCCCCCCCCCCCccccceeeeeeeeeeccceeccccceeEEEeecCCC-cCCCCCCcEEEEEEEEEeCCCcEEeeccCC
Q 014473 117 EDDCPVAAPSTFPKDEELHFEIEMIDFAKAKIIADDFGVVKKVINEGQG-WETPRAPYEVKAWISAKTGDGKLILSHREG 195 (424)
Q Consensus 117 ~~g~~~~~~~~ip~~~~l~~~iel~~i~~~~~~~~D~~v~k~i~~~g~g-~~~p~~gd~v~v~y~~~~~dg~~~~s~~~~ 195 (424)
+.+.| +.||++++|.|+|+|+ |+++++.|+++|.+ ..+|..|..|++||.+.+.|+ +|+++.
T Consensus 62 ~~~~p----p~ip~~a~l~fe~el~----------Dg~iiKriir~G~gd~~~P~~g~~V~v~~~G~~~~~-~f~~~~-- 124 (397)
T KOG0543|consen 62 EAGSP----PKIPSNATLLFEVELL----------DGGIIKRIIREGEGDYSRPNKGAVVKVHLEGELEDG-VFDQRE-- 124 (397)
T ss_pred ccCCC----CCCCCCcceeeeeccc----------CCceEEeeeecCCCCCCCCCCCcEEEEEEEEEECCc-ceeccc--
Confidence 55554 8899999999999999 89999999999999 899999999999999999988 666533
Q ss_pred cCEEEEeCC-CCcchhHHHHHhccccccEEEEEEecccccCC--CCCCCcCCCceEEEEEEEEEEE
Q 014473 196 EPYFFTFGK-SEVPKGLEMGIGTMTREEKAVIYVTSQYLTPS--PLMPVVEGCEEVHFEVELVHLI 258 (424)
Q Consensus 196 ~p~~~~~g~-~~~~~gl~~~l~~M~~Ge~a~~~vp~~~~~g~--~~~~~ip~~~~l~~~vel~~~~ 258 (424)
-.|.|..|+ ..++.||+.||..|++||.+.|+++|+|+||+ +.++.|||++.|.|+|+|+++.
T Consensus 125 ~~fe~~~Ge~~~vi~Gle~al~~M~~GE~a~v~i~~~YayG~~~~~~p~IPPnA~l~yEVeL~~f~ 190 (397)
T KOG0543|consen 125 LRFEFGEGEDIDVIEGLEIALRMMKVGEVALVTIDPKYAYGEEGGEPPLIPPNATLLYEVELLDFE 190 (397)
T ss_pred cceEEecCCccchhHHHHHHHHhcCccceEEEEeCcccccCCCCCCCCCCCCCceEEEEEEEEeee
Confidence 237788887 47999999999999999999999999999995 4679999999999999999998
No 5
>KOG0544 consensus FKBP-type peptidyl-prolyl cis-trans isomerase [Posttranslational modification, protein turnover, chaperones]
Probab=99.95 E-value=3.5e-28 Score=186.04 Aligned_cols=107 Identities=36% Similarity=0.597 Sum_probs=100.9
Q ss_pred ceEEEEEeCCCCCCCCCCCCCCCeEEEEEEEEEeCCCCcEEEeecCCCCCCCeEEEeCCCCcchhHHHHHhccCCCcEEE
Q 014473 268 RLIKRRIRDGKGEFPMDCPLHDSLLCVHYKGMLLNEEKKVFYDTRVDNDGQPLEFSSGEGLVPEGFEMCVRLMLPGEIAL 347 (424)
Q Consensus 268 ~v~k~il~~G~G~~~~~~p~~g~~V~v~y~g~~~~~~g~~f~ds~~~~~~~p~~~~lG~~~~~~gle~~L~~m~~Ge~~~ 347 (424)
|+.+++|.+|+|.. .|+.|++|++||+|.+.| |+.| ||+.+ ++.||.|.+|.|++|.||++++..|.+||+++
T Consensus 2 Gv~~~~i~~Gdg~t---fpK~Gqtvt~hYtg~L~d--G~kf-DSs~d-r~kPfkf~IGkgeVIkGwdegv~qmsvGekak 74 (108)
T KOG0544|consen 2 GVEKQVISPGDGRT---FPKKGQTVTVHYTGTLQD--GKKF-DSSRD-RGKPFKFKIGKGEVIKGWDEGVAQMSVGEKAK 74 (108)
T ss_pred CceeEEeeCCCCcc---cCCCCCEEEEEEEeEecC--CcEe-ecccc-cCCCeeEEecCcceeechhhcchhccccccce
Confidence 57889999999963 489999999999999998 9999 88887 69999999999999999999999999999999
Q ss_pred EEecCCCcccCCCCCCCCCCCCeEEEEEEEEeee
Q 014473 348 VTCPPDYAYDKFLRPANVPEGAHIQWEIELLGFE 381 (424)
Q Consensus 348 i~ip~~~~yg~~~~~~~ip~~~~l~f~Vel~~~~ 381 (424)
++|.|++|||..|.+..||||++|+|+|||++++
T Consensus 75 Lti~pd~aYG~~G~p~~IppNatL~FdVEll~v~ 108 (108)
T KOG0544|consen 75 LTISPDYAYGPRGHPGGIPPNATLVFDVELLKVN 108 (108)
T ss_pred eeeccccccCCCCCCCccCCCcEEEEEEEEEecC
Confidence 9999999999999888999999999999999873
No 6
>KOG0544 consensus FKBP-type peptidyl-prolyl cis-trans isomerase [Posttranslational modification, protein turnover, chaperones]
Probab=99.94 E-value=6.1e-27 Score=179.20 Aligned_cols=107 Identities=30% Similarity=0.602 Sum_probs=102.8
Q ss_pred ceEEEEEecCCCCCCCCCCCEEEEEEEEEecCCcEEEecccCCCCCCccEEEEcCCCcchhhHHHHhcCCCCCcEEEEEE
Q 014473 30 SLMKAVMRPGGGDSTPSDGDQVAYHCTVRTLDGVIVESTRSEYGGKGIPIRHVLGKSKILLGLLEGIPTMLKGEVSMFKM 109 (424)
Q Consensus 30 gl~~~il~~G~G~~~p~~gd~V~i~Y~~~~~dG~~~dst~~~~~~~~~p~~~~lG~~~~i~gle~al~~m~~Ge~~~i~i 109 (424)
|+.++++++|+|...|+.||.|++||++.+.||+.||||.+ +++|+.|.+|.+++|+||++++..|.+|+++++.|
T Consensus 2 Gv~~~~i~~Gdg~tfpK~Gqtvt~hYtg~L~dG~kfDSs~d----r~kPfkf~IGkgeVIkGwdegv~qmsvGekakLti 77 (108)
T KOG0544|consen 2 GVEKQVISPGDGRTFPKKGQTVTVHYTGTLQDGKKFDSSRD----RGKPFKFKIGKGEVIKGWDEGVAQMSVGEKAKLTI 77 (108)
T ss_pred CceeEEeeCCCCcccCCCCCEEEEEEEeEecCCcEeecccc----cCCCeeEEecCcceeechhhcchhccccccceeee
Confidence 68999999999998999999999999999999999999999 89999999999999999999999999999999999
Q ss_pred ccCcccCCCCCCCCCCCCCCccccceeeeeeeeee
Q 014473 110 KPQMHYGEDDCPVAAPSTFPKDEELHFEIEMIDFA 144 (424)
Q Consensus 110 p~~~~yg~~g~~~~~~~~ip~~~~l~~~iel~~i~ 144 (424)
+|++|||..|.| ..||||++|+|+|||++++
T Consensus 78 ~pd~aYG~~G~p----~~IppNatL~FdVEll~v~ 108 (108)
T KOG0544|consen 78 SPDYAYGPRGHP----GGIPPNATLVFDVELLKVN 108 (108)
T ss_pred ccccccCCCCCC----CccCCCcEEEEEEEEEecC
Confidence 999999999965 7899999999999999863
No 7
>COG0545 FkpA FKBP-type peptidyl-prolyl cis-trans isomerases 1 [Posttranslational modification, protein turnover, chaperones]
Probab=99.94 E-value=6.1e-27 Score=207.14 Aligned_cols=114 Identities=31% Similarity=0.622 Sum_probs=107.5
Q ss_pred cccCceecCCceEEEEEecCCCCCCCCCCCEEEEEEEEEecCCcEEEecccCCCCCCccEEEEcCCCcchhhHHHHhcCC
Q 014473 20 DKRRMKIVPGSLMKAVMRPGGGDSTPSDGDQVAYHCTVRTLDGVIVESTRSEYGGKGIPIRHVLGKSKILLGLLEGIPTM 99 (424)
Q Consensus 20 ~~~~~~~~~~gl~~~il~~G~G~~~p~~gd~V~i~Y~~~~~dG~~~dst~~~~~~~~~p~~~~lG~~~~i~gle~al~~m 99 (424)
....+++++|||+|++++.|+|.. |..+|.|++||++++.||++|||+++ +++|+.|.|| ++|+||.++|.+|
T Consensus 92 k~~~v~~~~sgl~y~~~~~G~G~~-~~~~~~V~vhY~G~l~~G~vFDsS~~----rg~p~~f~l~--~vI~Gw~egl~~M 164 (205)
T COG0545 92 KEKGVKTLPSGLQYKVLKAGDGAA-PKKGDTVTVHYTGTLIDGTVFDSSYD----RGQPAEFPLG--GVIPGWDEGLQGM 164 (205)
T ss_pred ccCCceECCCCcEEEEEeccCCCC-CCCCCEEEEEEEEecCCCCccccccc----cCCCceeecC--CeeehHHHHHhhC
Confidence 456788899999999999999998 99999999999999999999999998 8999999996 9999999999999
Q ss_pred CCCcEEEEEEccCcccCCCCCCCCCCCCCCccccceeeeeeeeee
Q 014473 100 LKGEVSMFKMKPQMHYGEDDCPVAAPSTFPKDEELHFEIEMIDFA 144 (424)
Q Consensus 100 ~~Ge~~~i~ip~~~~yg~~g~~~~~~~~ip~~~~l~~~iel~~i~ 144 (424)
++|++++++|||++|||.+|.+ +.||||++|+|+|+|+++.
T Consensus 165 ~vG~k~~l~IP~~laYG~~g~~----g~Ippns~LvFeVeLl~v~ 205 (205)
T COG0545 165 KVGGKRKLTIPPELAYGERGVP----GVIPPNSTLVFEVELLDVK 205 (205)
T ss_pred CCCceEEEEeCchhccCcCCCC----CCCCCCCeEEEEEEEEecC
Confidence 9999999999999999999975 5699999999999999863
No 8
>COG0545 FkpA FKBP-type peptidyl-prolyl cis-trans isomerases 1 [Posttranslational modification, protein turnover, chaperones]
Probab=99.94 E-value=1.9e-26 Score=203.94 Aligned_cols=107 Identities=32% Similarity=0.524 Sum_probs=101.7
Q ss_pred cCCCceEEEEEeCCCCCCCCCCCCCCCeEEEEEEEEEeCCCCcEEEeecCCCCCCCeEEEeCCCCcchhHHHHHhccCCC
Q 014473 264 LGDGRLIKRRIRDGKGEFPMDCPLHDSLLCVHYKGMLLNEEKKVFYDTRVDNDGQPLEFSSGEGLVPEGFEMCVRLMLPG 343 (424)
Q Consensus 264 ~~d~~v~k~il~~G~G~~~~~~p~~g~~V~v~y~g~~~~~~g~~f~ds~~~~~~~p~~~~lG~~~~~~gle~~L~~m~~G 343 (424)
+..++|.+++++.|+|.. |..+++|++||+|++.| |++| |||++ +++|+.|.|| ++|+||.++|++|++|
T Consensus 98 ~~~sgl~y~~~~~G~G~~----~~~~~~V~vhY~G~l~~--G~vF-DsS~~-rg~p~~f~l~--~vI~Gw~egl~~M~vG 167 (205)
T COG0545 98 TLPSGLQYKVLKAGDGAA----PKKGDTVTVHYTGTLID--GTVF-DSSYD-RGQPAEFPLG--GVIPGWDEGLQGMKVG 167 (205)
T ss_pred ECCCCcEEEEEeccCCCC----CCCCCEEEEEEEEecCC--CCcc-ccccc-cCCCceeecC--CeeehHHHHHhhCCCC
Confidence 457899999999999987 68999999999999998 9999 99988 7999999999 7999999999999999
Q ss_pred cEEEEEecCCCcccCCCCCCCCCCCCeEEEEEEEEee
Q 014473 344 EIALVTCPPDYAYDKFLRPANVPEGAHIQWEIELLGF 380 (424)
Q Consensus 344 e~~~i~ip~~~~yg~~~~~~~ip~~~~l~f~Vel~~~ 380 (424)
++++++|||++|||..+.++.||||++|+|+|+|+++
T Consensus 168 ~k~~l~IP~~laYG~~g~~g~Ippns~LvFeVeLl~v 204 (205)
T COG0545 168 GKRKLTIPPELAYGERGVPGVIPPNSTLVFEVELLDV 204 (205)
T ss_pred ceEEEEeCchhccCcCCCCCCCCCCCeEEEEEEEEec
Confidence 9999999999999999988889999999999999987
No 9
>PRK11570 peptidyl-prolyl cis-trans isomerase; Provisional
Probab=99.90 E-value=4.2e-23 Score=188.63 Aligned_cols=113 Identities=24% Similarity=0.451 Sum_probs=106.1
Q ss_pred cccCceecCCceEEEEEecCCCCCCCCCCCEEEEEEEEEecCCcEEEecccCCCCCCccEEEEcCCCcchhhHHHHhcCC
Q 014473 20 DKRRMKIVPGSLMKAVMRPGGGDSTPSDGDQVAYHCTVRTLDGVIVESTRSEYGGKGIPIRHVLGKSKILLGLLEGIPTM 99 (424)
Q Consensus 20 ~~~~~~~~~~gl~~~il~~G~G~~~p~~gd~V~i~Y~~~~~dG~~~dst~~~~~~~~~p~~~~lG~~~~i~gle~al~~m 99 (424)
.+...+++++||+|+++++|+|.. |+.||.|.+||++++.||++|++|+. ++.|+.|.++ ++++||+++|.+|
T Consensus 93 k~~gv~~t~sGl~y~vi~~G~G~~-p~~~d~V~v~Y~g~l~dG~vfdss~~----~g~P~~f~l~--~vipG~~eaL~~M 165 (206)
T PRK11570 93 KKEGVNSTESGLQFRVLTQGEGAI-PARTDRVRVHYTGKLIDGTVFDSSVA----RGEPAEFPVN--GVIPGWIEALTLM 165 (206)
T ss_pred hcCCcEECCCCcEEEEEeCCCCCC-CCCCCEEEEEEEEEECCCCEEEeccC----CCCCeEEEee--chhhHHHHHHcCC
Confidence 356889999999999999999997 99999999999999999999999997 7889999995 6999999999999
Q ss_pred CCCcEEEEEEccCcccCCCCCCCCCCCCCCccccceeeeeeeee
Q 014473 100 LKGEVSMFKMKPQMHYGEDDCPVAAPSTFPKDEELHFEIEMIDF 143 (424)
Q Consensus 100 ~~Ge~~~i~ip~~~~yg~~g~~~~~~~~ip~~~~l~~~iel~~i 143 (424)
++|++++|+||++++||+.|.+ +.|||+++|+|+|+|++|
T Consensus 166 ~~G~k~~~~IP~~lAYG~~g~~----~~Ipp~s~Lif~veLl~i 205 (206)
T PRK11570 166 PVGSKWELTIPHELAYGERGAG----ASIPPFSTLVFEVELLEI 205 (206)
T ss_pred CCCCEEEEEECHHHcCCCCCCC----CCcCCCCeEEEEEEEEEE
Confidence 9999999999999999999874 679999999999999987
No 10
>KOG0552 consensus FKBP-type peptidyl-prolyl cis-trans isomerase [Posttranslational modification, protein turnover, chaperones]
Probab=99.89 E-value=1.2e-22 Score=184.33 Aligned_cols=117 Identities=24% Similarity=0.479 Sum_probs=106.8
Q ss_pred CcccccCceecCCceEEEEEecCCCCCCCCCCCEEEEEEEEEec-CCcEEEecccCCCCCCccEE-EEcCCCcchhhHHH
Q 014473 17 SEDDKRRMKIVPGSLMKAVMRPGGGDSTPSDGDQVAYHCTVRTL-DGVIVESTRSEYGGKGIPIR-HVLGKSKILLGLLE 94 (424)
Q Consensus 17 ~~~~~~~~~~~~~gl~~~il~~G~G~~~p~~gd~V~i~Y~~~~~-dG~~~dst~~~~~~~~~p~~-~~lG~~~~i~gle~ 94 (424)
.|+...-.+++++||.|+.++-|+|+. |..|+.|.+||.+++. +|++||+++. +.|+. |.+|.+++|+||+.
T Consensus 108 ~ek~~~~~~tl~~Gl~y~D~~vG~G~~-a~~G~rV~v~Y~Gkl~~~GkvFd~~~~-----~kp~~~f~lg~g~VIkG~d~ 181 (226)
T KOG0552|consen 108 VEKQKPKSRTLPGGLRYEDLRVGSGPS-AKKGKRVSVRYIGKLKGNGKVFDSNFG-----GKPFKLFRLGSGEVIKGWDV 181 (226)
T ss_pred ccccCccceecCCCcEEEEEEecCCCC-CCCCCEEEEEEEEEecCCCeEeecccC-----CCCccccccCCCCCCchHHH
Confidence 343344447899999999999999998 9999999999999998 9999999985 67888 99999999999999
Q ss_pred HhcCCCCCcEEEEEEccCcccCCCCCCCCCCCCCCccccceeeeeeeeee
Q 014473 95 GIPTMLKGEVSMFKMKPQMHYGEDDCPVAAPSTFPKDEELHFEIEMIDFA 144 (424)
Q Consensus 95 al~~m~~Ge~~~i~ip~~~~yg~~g~~~~~~~~ip~~~~l~~~iel~~i~ 144 (424)
++.+|++|.+++|+|||++|||.++. +.||||++|+|+|+|+.+.
T Consensus 182 gv~GMkvGGkRrviIPp~lgYg~~g~-----~~IppnstL~fdVEL~~v~ 226 (226)
T KOG0552|consen 182 GVEGMKVGGKRRVIIPPELGYGKKGV-----PEIPPNSTLVFDVELLSVK 226 (226)
T ss_pred hhhhhccCCeeEEEeCccccccccCc-----CcCCCCCcEEEEEEEEecC
Confidence 99999999999999999999999998 5799999999999999863
No 11
>TIGR03516 ppisom_GldI peptidyl-prolyl isomerase, gliding motility-associated. Members of this protein family are exclusive to the Bacteroidetes phylum (previously Cytophaga-Flavobacteria-Bacteroides). GldI is a FKBP-type peptidyl-prolyl cis-trans isomerase (pfam00254) linked to a type of rapid surface gliding motility found in certain Bacteroidetes, such as Flavobacterium johnsoniae and Cytophaga hutchinsonii. Knockout of this gene abolishes the gliding phenotype. Gliding motility appears closely linked to chitin utilization in the model species Flavobacterium johnsoniae. This family is only found in Bacteroidetes containing the suite of genes proposed to confer the gliding motility phenotype.
Probab=99.87 E-value=8.5e-22 Score=175.85 Aligned_cols=111 Identities=19% Similarity=0.326 Sum_probs=101.9
Q ss_pred ceecCCceEEEEEec--CCCCCCCCCCCEEEEEEEEEecCCcEEEecccCCCCCCccEEEEcCCCcchhhHHHHhcCCCC
Q 014473 24 MKIVPGSLMKAVMRP--GGGDSTPSDGDQVAYHCTVRTLDGVIVESTRSEYGGKGIPIRHVLGKSKILLGLLEGIPTMLK 101 (424)
Q Consensus 24 ~~~~~~gl~~~il~~--G~G~~~p~~gd~V~i~Y~~~~~dG~~~dst~~~~~~~~~p~~~~lG~~~~i~gle~al~~m~~ 101 (424)
...+++|++|.+++. |+|.. |+.||.|++||++++.||++|++++. ..|+.|.+|.+++++||+++|.+|++
T Consensus 64 ~~~t~sGl~Y~v~~~~~g~g~~-p~~gd~V~v~Y~~~~~dG~v~~ss~~-----~~P~~f~vg~~~vi~Gl~e~L~~Mk~ 137 (177)
T TIGR03516 64 YETSQNGFWYYYNQKDTGEGTT-PEFGDLVTFEYDIRALDGDVIYSEEE-----LGPQTYKVDQQDLFSGLRDGLKLMKE 137 (177)
T ss_pred ceECCCccEEEEEEecCCCCCc-CCCCCEEEEEEEEEeCCCCEEEeCCC-----CCCEEEEeCCcchhHHHHHHHcCCCC
Confidence 467899999999976 66665 99999999999999999999999985 35999999999999999999999999
Q ss_pred CcEEEEEEccCcccCCCCCCCCCCCCCCccccceeeeeeeeee
Q 014473 102 GEVSMFKMKPQMHYGEDDCPVAAPSTFPKDEELHFEIEMIDFA 144 (424)
Q Consensus 102 Ge~~~i~ip~~~~yg~~g~~~~~~~~ip~~~~l~~~iel~~i~ 144 (424)
|++++|+|||++|||.+|.+ ..||||++|+|+|+|++|.
T Consensus 138 Ge~~~~~iP~~~AYG~~g~~----~~Ippns~L~f~IeL~~i~ 176 (177)
T TIGR03516 138 GETATFLFPSHKAYGYYGDQ----NKIGPNLPIISTVTLLNIK 176 (177)
T ss_pred CCEEEEEECHHHcCCCCCCC----CCcCcCCcEEEEEEEEEec
Confidence 99999999999999999864 6799999999999999985
No 12
>PRK11570 peptidyl-prolyl cis-trans isomerase; Provisional
Probab=99.86 E-value=3.2e-21 Score=176.28 Aligned_cols=107 Identities=31% Similarity=0.473 Sum_probs=99.4
Q ss_pred cCCCceEEEEEeCCCCCCCCCCCCCCCeEEEEEEEEEeCCCCcEEEeecCCCCCCCeEEEeCCCCcchhHHHHHhccCCC
Q 014473 264 LGDGRLIKRRIRDGKGEFPMDCPLHDSLLCVHYKGMLLNEEKKVFYDTRVDNDGQPLEFSSGEGLVPEGFEMCVRLMLPG 343 (424)
Q Consensus 264 ~~d~~v~k~il~~G~G~~~~~~p~~g~~V~v~y~g~~~~~~g~~f~ds~~~~~~~p~~~~lG~~~~~~gle~~L~~m~~G 343 (424)
..++|+.++++++|+|.. |..++.|+|||++++.| |++| |+++. +++|+.|.++ .+++||+++|.+|++|
T Consensus 99 ~t~sGl~y~vi~~G~G~~----p~~~d~V~v~Y~g~l~d--G~vf-dss~~-~g~P~~f~l~--~vipG~~eaL~~M~~G 168 (206)
T PRK11570 99 STESGLQFRVLTQGEGAI----PARTDRVRVHYTGKLID--GTVF-DSSVA-RGEPAEFPVN--GVIPGWIEALTLMPVG 168 (206)
T ss_pred ECCCCcEEEEEeCCCCCC----CCCCCEEEEEEEEEECC--CCEE-EeccC-CCCCeEEEee--chhhHHHHHHcCCCCC
Confidence 356899999999999976 79999999999999987 9999 88876 5899999997 5999999999999999
Q ss_pred cEEEEEecCCCcccCCCCCCCCCCCCeEEEEEEEEee
Q 014473 344 EIALVTCPPDYAYDKFLRPANVPEGAHIQWEIELLGF 380 (424)
Q Consensus 344 e~~~i~ip~~~~yg~~~~~~~ip~~~~l~f~Vel~~~ 380 (424)
+++.|+|||++|||..+.++.|||+++|+|+|||++|
T Consensus 169 ~k~~~~IP~~lAYG~~g~~~~Ipp~s~Lif~veLl~i 205 (206)
T PRK11570 169 SKWELTIPHELAYGERGAGASIPPFSTLVFEVELLEI 205 (206)
T ss_pred CEEEEEECHHHcCCCCCCCCCcCCCCeEEEEEEEEEE
Confidence 9999999999999999988789999999999999997
No 13
>PRK10902 FKBP-type peptidyl-prolyl cis-trans isomerase; Provisional
Probab=99.85 E-value=6.1e-21 Score=180.67 Aligned_cols=116 Identities=24% Similarity=0.500 Sum_probs=107.0
Q ss_pred cccCceecCCceEEEEEecCCCCCCCCCCCEEEEEEEEEecCCcEEEecccCCCCCCccEEEEcCCCcchhhHHHHhcCC
Q 014473 20 DKRRMKIVPGSLMKAVMRPGGGDSTPSDGDQVAYHCTVRTLDGVIVESTRSEYGGKGIPIRHVLGKSKILLGLLEGIPTM 99 (424)
Q Consensus 20 ~~~~~~~~~~gl~~~il~~G~G~~~p~~gd~V~i~Y~~~~~dG~~~dst~~~~~~~~~p~~~~lG~~~~i~gle~al~~m 99 (424)
.+.+++.+++||+|+|+++|+|.. |+.||.|.|||++++.||++|++++. ++.|+.|.+ +++++||+++|.+|
T Consensus 137 k~~gv~~t~sGl~y~Vi~~G~G~~-p~~gD~V~V~Y~g~l~dG~vfdss~~----~g~p~~f~l--~~vipG~~EaL~~M 209 (269)
T PRK10902 137 KEKGVKTTSTGLLYKVEKEGTGEA-PKDSDTVVVNYKGTLIDGKEFDNSYT----RGEPLSFRL--DGVIPGWTEGLKNI 209 (269)
T ss_pred cCCCcEECCCccEEEEEeCCCCCC-CCCCCEEEEEEEEEeCCCCEeecccc----CCCceEEec--CCcchHHHHHHhcC
Confidence 356788999999999999999997 99999999999999999999999987 678999988 46999999999999
Q ss_pred CCCcEEEEEEccCcccCCCCCCCCCCCCCCccccceeeeeeeeeeccc
Q 014473 100 LKGEVSMFKMKPQMHYGEDDCPVAAPSTFPKDEELHFEIEMIDFAKAK 147 (424)
Q Consensus 100 ~~Ge~~~i~ip~~~~yg~~g~~~~~~~~ip~~~~l~~~iel~~i~~~~ 147 (424)
++|++++|+||++++||..+. +.||||++|+|+|+|+++.+..
T Consensus 210 k~Gek~~l~IP~~laYG~~g~-----~gIppns~LvfeVeLl~V~~~~ 252 (269)
T PRK10902 210 KKGGKIKLVIPPELAYGKAGV-----PGIPANSTLVFDVELLDVKPAP 252 (269)
T ss_pred CCCcEEEEEECchhhCCCCCC-----CCCCCCCcEEEEEEEEEeccCc
Confidence 999999999999999999885 4699999999999999998654
No 14
>KOG0552 consensus FKBP-type peptidyl-prolyl cis-trans isomerase [Posttranslational modification, protein turnover, chaperones]
Probab=99.85 E-value=9.1e-21 Score=172.13 Aligned_cols=108 Identities=31% Similarity=0.504 Sum_probs=100.4
Q ss_pred cCCCceEEEEEeCCCCCCCCCCCCCCCeEEEEEEEEEeCCCCcEEEeecCCCCCCCeE-EEeCCCCcchhHHHHHhccCC
Q 014473 264 LGDGRLIKRRIRDGKGEFPMDCPLHDSLLCVHYKGMLLNEEKKVFYDTRVDNDGQPLE-FSSGEGLVPEGFEMCVRLMLP 342 (424)
Q Consensus 264 ~~d~~v~k~il~~G~G~~~~~~p~~g~~V~v~y~g~~~~~~g~~f~ds~~~~~~~p~~-~~lG~~~~~~gle~~L~~m~~ 342 (424)
+-.+||+++-|+.|+|.. |..|+.|.+||.|++.. +|++| |+++. +.|+. |.+|.+.+|+||+.+|.+|++
T Consensus 117 tl~~Gl~y~D~~vG~G~~----a~~G~rV~v~Y~Gkl~~-~GkvF-d~~~~--~kp~~~f~lg~g~VIkG~d~gv~GMkv 188 (226)
T KOG0552|consen 117 TLPGGLRYEDLRVGSGPS----AKKGKRVSVRYIGKLKG-NGKVF-DSNFG--GKPFKLFRLGSGEVIKGWDVGVEGMKV 188 (226)
T ss_pred ecCCCcEEEEEEecCCCC----CCCCCEEEEEEEEEecC-CCeEe-ecccC--CCCccccccCCCCCCchHHHhhhhhcc
Confidence 456899999999999987 79999999999999985 59999 77765 78999 999999999999999999999
Q ss_pred CcEEEEEecCCCcccCCCCCCCCCCCCeEEEEEEEEee
Q 014473 343 GEIALVTCPPDYAYDKFLRPANVPEGAHIQWEIELLGF 380 (424)
Q Consensus 343 Ge~~~i~ip~~~~yg~~~~~~~ip~~~~l~f~Vel~~~ 380 (424)
|.+++|+|||++|||..+.+ .||||++|+|+|||+.+
T Consensus 189 GGkRrviIPp~lgYg~~g~~-~IppnstL~fdVEL~~v 225 (226)
T KOG0552|consen 189 GGKRRVIIPPELGYGKKGVP-EIPPNSTLVFDVELLSV 225 (226)
T ss_pred CCeeEEEeCccccccccCcC-cCCCCCcEEEEEEEEec
Confidence 99999999999999999988 59999999999999986
No 15
>TIGR03516 ppisom_GldI peptidyl-prolyl isomerase, gliding motility-associated. Members of this protein family are exclusive to the Bacteroidetes phylum (previously Cytophaga-Flavobacteria-Bacteroides). GldI is a FKBP-type peptidyl-prolyl cis-trans isomerase (pfam00254) linked to a type of rapid surface gliding motility found in certain Bacteroidetes, such as Flavobacterium johnsoniae and Cytophaga hutchinsonii. Knockout of this gene abolishes the gliding phenotype. Gliding motility appears closely linked to chitin utilization in the model species Flavobacterium johnsoniae. This family is only found in Bacteroidetes containing the suite of genes proposed to confer the gliding motility phenotype.
Probab=99.84 E-value=2.2e-20 Score=166.73 Aligned_cols=111 Identities=18% Similarity=0.209 Sum_probs=97.8
Q ss_pred cCCCceEEEEEeCCCCCCCCCCCCCCCeEEEEEEEEEeCCCCcEEEeecCCCCCCCeEEEeCCCCcchhHHHHHhccCCC
Q 014473 264 LGDGRLIKRRIRDGKGEFPMDCPLHDSLLCVHYKGMLLNEEKKVFYDTRVDNDGQPLEFSSGEGLVPEGFEMCVRLMLPG 343 (424)
Q Consensus 264 ~~d~~v~k~il~~G~G~~~~~~p~~g~~V~v~y~g~~~~~~g~~f~ds~~~~~~~p~~~~lG~~~~~~gle~~L~~m~~G 343 (424)
..++|+.+.++..+.|.. ..|..||.|++||++++.| |++| ++++. ..|+.|.+|.+++++||+++|.+|++|
T Consensus 66 ~t~sGl~Y~v~~~~~g~g--~~p~~gd~V~v~Y~~~~~d--G~v~-~ss~~--~~P~~f~vg~~~vi~Gl~e~L~~Mk~G 138 (177)
T TIGR03516 66 TSQNGFWYYYNQKDTGEG--TTPEFGDLVTFEYDIRALD--GDVI-YSEEE--LGPQTYKVDQQDLFSGLRDGLKLMKEG 138 (177)
T ss_pred ECCCccEEEEEEecCCCC--CcCCCCCEEEEEEEEEeCC--CCEE-EeCCC--CCCEEEEeCCcchhHHHHHHHcCCCCC
Confidence 456789999887644432 2379999999999999988 9999 66654 469999999999999999999999999
Q ss_pred cEEEEEecCCCcccCCCCCCCCCCCCeEEEEEEEEeee
Q 014473 344 EIALVTCPPDYAYDKFLRPANVPEGAHIQWEIELLGFE 381 (424)
Q Consensus 344 e~~~i~ip~~~~yg~~~~~~~ip~~~~l~f~Vel~~~~ 381 (424)
|+++|++||++|||..+..+.||||++|+|+|+|++|.
T Consensus 139 e~~~~~iP~~~AYG~~g~~~~Ippns~L~f~IeL~~i~ 176 (177)
T TIGR03516 139 ETATFLFPSHKAYGYYGDQNKIGPNLPIISTVTLLNIK 176 (177)
T ss_pred CEEEEEECHHHcCCCCCCCCCcCcCCcEEEEEEEEEec
Confidence 99999999999999999887899999999999999985
No 16
>PF00254 FKBP_C: FKBP-type peptidyl-prolyl cis-trans isomerase; InterPro: IPR001179 Synonym(s): Peptidylprolyl cis-trans isomerase FKBP-type peptidylprolyl isomerases (5.2.1.8 from EC) in vertebrates, are receptors for the two immunosuppressants, FK506 and rapamycin. The drugs inhibit T cell proliferation by arresting two distinct cytoplasmic signal transmission pathways. Peptidylprolyl isomerases accelerate protein folding by catalysing the cis-trans isomerisation of proline imidic peptide bonds in oligopeptides. These proteins are found in a variety of organisms.; GO: 0006457 protein folding; PDB: 1IX5_A 3JXV_A 3JYM_A 1T11_A 1PBK_A 1FD9_A 2VCD_A 3B7X_A 1Q6H_B 1Q6I_B ....
Probab=99.80 E-value=4.3e-19 Score=142.81 Aligned_cols=94 Identities=35% Similarity=0.606 Sum_probs=86.7
Q ss_pred CCCCCCCCCEEEEEEEEEecCCcEEEecccCCCCCCccEEEEcCCCcchhhHHHHhcCCCCCcEEEEEEccCcccCCCCC
Q 014473 41 GDSTPSDGDQVAYHCTVRTLDGVIVESTRSEYGGKGIPIRHVLGKSKILLGLLEGIPTMLKGEVSMFKMKPQMHYGEDDC 120 (424)
Q Consensus 41 G~~~p~~gd~V~i~Y~~~~~dG~~~dst~~~~~~~~~p~~~~lG~~~~i~gle~al~~m~~Ge~~~i~ip~~~~yg~~g~ 120 (424)
|.++|+.||.|++||++++.||+.|++++. .+.|+.|.+|.+++++||++||.+|++|++++|.||++++||+.+.
T Consensus 1 ~~~~~~~gd~V~i~y~~~~~~g~~~~~~~~----~~~~~~~~~g~~~~i~g~e~al~~m~~Ge~~~~~vp~~~ayg~~~~ 76 (94)
T PF00254_consen 1 GPRTPKEGDTVTIHYTGRLEDGKVFDSSYQ----EGEPFEFRLGSGQVIPGLEEALIGMKVGEKREFYVPPELAYGEKGL 76 (94)
T ss_dssp SSSSBSTTSEEEEEEEEEETTSEEEEETTT----TTSEEEEETTSSSSSHHHHHHHTTSBTTEEEEEEEEGGGTTTTTTB
T ss_pred CCccCCCCCEEEEEEEEEECCCcEEEEeee----cCcceeeeeccCccccchhhhcccccCCCEeeeEeCChhhcCcccc
Confidence 455699999999999999999999999976 6789999999999999999999999999999999999999999887
Q ss_pred CCCCCCCCCccccceeeeeee
Q 014473 121 PVAAPSTFPKDEELHFEIEMI 141 (424)
Q Consensus 121 ~~~~~~~ip~~~~l~~~iel~ 141 (424)
.. ..||++++|+|+|+|+
T Consensus 77 ~~---~~ip~~~~l~f~Iell 94 (94)
T PF00254_consen 77 EP---PKIPPNSTLVFEIELL 94 (94)
T ss_dssp CT---TTBTTTSEEEEEEEEE
T ss_pred CC---CCcCCCCeEEEEEEEC
Confidence 42 4699999999999986
No 17
>PRK10902 FKBP-type peptidyl-prolyl cis-trans isomerase; Provisional
Probab=99.80 E-value=8.5e-19 Score=166.07 Aligned_cols=109 Identities=28% Similarity=0.500 Sum_probs=99.4
Q ss_pred cCCCceEEEEEeCCCCCCCCCCCCCCCeEEEEEEEEEeCCCCcEEEeecCCCCCCCeEEEeCCCCcchhHHHHHhccCCC
Q 014473 264 LGDGRLIKRRIRDGKGEFPMDCPLHDSLLCVHYKGMLLNEEKKVFYDTRVDNDGQPLEFSSGEGLVPEGFEMCVRLMLPG 343 (424)
Q Consensus 264 ~~d~~v~k~il~~G~G~~~~~~p~~g~~V~v~y~g~~~~~~g~~f~ds~~~~~~~p~~~~lG~~~~~~gle~~L~~m~~G 343 (424)
+.++|++++++++|+|.. |..||.|.|||++++.| |++| ++++. +++|+.|.++ .++|||+++|.+|++|
T Consensus 143 ~t~sGl~y~Vi~~G~G~~----p~~gD~V~V~Y~g~l~d--G~vf-dss~~-~g~p~~f~l~--~vipG~~EaL~~Mk~G 212 (269)
T PRK10902 143 TTSTGLLYKVEKEGTGEA----PKDSDTVVVNYKGTLID--GKEF-DNSYT-RGEPLSFRLD--GVIPGWTEGLKNIKKG 212 (269)
T ss_pred ECCCccEEEEEeCCCCCC----CCCCCEEEEEEEEEeCC--CCEe-ecccc-CCCceEEecC--CcchHHHHHHhcCCCC
Confidence 357899999999999975 79999999999999987 9999 77776 5789999886 5999999999999999
Q ss_pred cEEEEEecCCCcccCCCCCCCCCCCCeEEEEEEEEeeecC
Q 014473 344 EIALVTCPPDYAYDKFLRPANVPEGAHIQWEIELLGFEKP 383 (424)
Q Consensus 344 e~~~i~ip~~~~yg~~~~~~~ip~~~~l~f~Vel~~~~~~ 383 (424)
+++.|+||++++||..+.+ .|||+++|+|+|+|+++...
T Consensus 213 ek~~l~IP~~laYG~~g~~-gIppns~LvfeVeLl~V~~~ 251 (269)
T PRK10902 213 GKIKLVIPPELAYGKAGVP-GIPANSTLVFDVELLDVKPA 251 (269)
T ss_pred cEEEEEECchhhCCCCCCC-CCCCCCcEEEEEEEEEeccC
Confidence 9999999999999999876 59999999999999999764
No 18
>PF00254 FKBP_C: FKBP-type peptidyl-prolyl cis-trans isomerase; InterPro: IPR001179 Synonym(s): Peptidylprolyl cis-trans isomerase FKBP-type peptidylprolyl isomerases (5.2.1.8 from EC) in vertebrates, are receptors for the two immunosuppressants, FK506 and rapamycin. The drugs inhibit T cell proliferation by arresting two distinct cytoplasmic signal transmission pathways. Peptidylprolyl isomerases accelerate protein folding by catalysing the cis-trans isomerisation of proline imidic peptide bonds in oligopeptides. These proteins are found in a variety of organisms.; GO: 0006457 protein folding; PDB: 1IX5_A 3JXV_A 3JYM_A 1T11_A 1PBK_A 1FD9_A 2VCD_A 3B7X_A 1Q6H_B 1Q6I_B ....
Probab=99.79 E-value=6.6e-19 Score=141.77 Aligned_cols=91 Identities=34% Similarity=0.568 Sum_probs=83.2
Q ss_pred CCCCCCCeEEEEEEEEEeCCCCcEEEeecCCCCCCCeEEEeCCCCcchhHHHHHhccCCCcEEEEEecCCCcccCCCCC-
Q 014473 284 DCPLHDSLLCVHYKGMLLNEEKKVFYDTRVDNDGQPLEFSSGEGLVPEGFEMCVRLMLPGEIALVTCPPDYAYDKFLRP- 362 (424)
Q Consensus 284 ~~p~~g~~V~v~y~g~~~~~~g~~f~ds~~~~~~~p~~~~lG~~~~~~gle~~L~~m~~Ge~~~i~ip~~~~yg~~~~~- 362 (424)
+.|+.||.|+|||++++.+ |++| ++++. .++|++|.+|.+++++||+++|.+|++||+++|.+||+++||..+..
T Consensus 3 ~~~~~gd~V~i~y~~~~~~--g~~~-~~~~~-~~~~~~~~~g~~~~i~g~e~al~~m~~Ge~~~~~vp~~~ayg~~~~~~ 78 (94)
T PF00254_consen 3 RTPKEGDTVTIHYTGRLED--GKVF-DSSYQ-EGEPFEFRLGSGQVIPGLEEALIGMKVGEKREFYVPPELAYGEKGLEP 78 (94)
T ss_dssp SSBSTTSEEEEEEEEEETT--SEEE-EETTT-TTSEEEEETTSSSSSHHHHHHHTTSBTTEEEEEEEEGGGTTTTTTBCT
T ss_pred ccCCCCCEEEEEEEEEECC--CcEE-EEeee-cCcceeeeeccCccccchhhhcccccCCCEeeeEeCChhhcCccccCC
Confidence 3489999999999999986 9999 66655 47899999999999999999999999999999999999999998873
Q ss_pred CCCCCCCeEEEEEEEE
Q 014473 363 ANVPEGAHIQWEIELL 378 (424)
Q Consensus 363 ~~ip~~~~l~f~Vel~ 378 (424)
..||++++|+|+|+|+
T Consensus 79 ~~ip~~~~l~f~Iell 94 (94)
T PF00254_consen 79 PKIPPNSTLVFEIELL 94 (94)
T ss_dssp TTBTTTSEEEEEEEEE
T ss_pred CCcCCCCeEEEEEEEC
Confidence 4699999999999996
No 19
>PRK15095 FKBP-type peptidyl-prolyl cis-trans isomerase; Provisional
Probab=99.60 E-value=2.6e-14 Score=125.28 Aligned_cols=84 Identities=26% Similarity=0.398 Sum_probs=75.2
Q ss_pred CCCCCCEEEEEEEEEecCCcEEEecccCCCCCCccEEEEcCCCcchhhHHHHhcCCCCCcEEEEEEccCcccCCCCCCCC
Q 014473 44 TPSDGDQVAYHCTVRTLDGVIVESTRSEYGGKGIPIRHVLGKSKILLGLLEGIPTMLKGEVSMFKMKPQMHYGEDDCPVA 123 (424)
Q Consensus 44 ~p~~gd~V~i~Y~~~~~dG~~~dst~~~~~~~~~p~~~~lG~~~~i~gle~al~~m~~Ge~~~i~ip~~~~yg~~g~~~~ 123 (424)
.++.||.|++||++++.||++|++|+. ++.|+.|.+|.+++++||++||.+|++|+++++.|||++|||++
T Consensus 4 ~i~~~~~V~v~Y~~~~~dG~v~dst~~----~~~P~~f~~G~g~vi~gle~aL~gm~~Ge~~~v~ipp~~ayG~~----- 74 (156)
T PRK15095 4 SVQSNSAVLVHFTLKLDDGSTAESTRN----NGKPALFRLGDGSLSEGLEQQLLGLKVGDKKTFSLEPEAAFGVP----- 74 (156)
T ss_pred ccCCCCEEEEEEEEEeCCCCEEEECCC----CCCCEEEEeCCCCccHHHHHHHcCCCCCCEEEEEEChHHhcCCC-----
Confidence 478999999999999999999999986 57899999999999999999999999999999999999999975
Q ss_pred CCCCCCccccceeeeeeeee
Q 014473 124 APSTFPKDEELHFEIEMIDF 143 (424)
Q Consensus 124 ~~~~ip~~~~l~~~iel~~i 143 (424)
+..++..+....+
T Consensus 75 -------d~~~v~~vp~~~f 87 (156)
T PRK15095 75 -------SPDLIQYFSRRDF 87 (156)
T ss_pred -------ChHHEEEecHHHC
Confidence 4566676666554
No 20
>PRK15095 FKBP-type peptidyl-prolyl cis-trans isomerase; Provisional
Probab=99.56 E-value=1.6e-14 Score=126.60 Aligned_cols=71 Identities=21% Similarity=0.312 Sum_probs=65.6
Q ss_pred CCCCCeEEEEEEEEEeCCCCcEEEeecCCCCCCCeEEEeCCCCcchhHHHHHhccCCCcEEEEEecCCCcccCCC
Q 014473 286 PLHDSLLCVHYKGMLLNEEKKVFYDTRVDNDGQPLEFSSGEGLVPEGFEMCVRLMLPGEIALVTCPPDYAYDKFL 360 (424)
Q Consensus 286 p~~g~~V~v~y~g~~~~~~g~~f~ds~~~~~~~p~~~~lG~~~~~~gle~~L~~m~~Ge~~~i~ip~~~~yg~~~ 360 (424)
.+.++.|++||++++.| |++| ||++. +++|+.|.+|.+++++||+++|.+|++|++++|.|||++|||...
T Consensus 5 i~~~~~V~v~Y~~~~~d--G~v~-dst~~-~~~P~~f~~G~g~vi~gle~aL~gm~~Ge~~~v~ipp~~ayG~~d 75 (156)
T PRK15095 5 VQSNSAVLVHFTLKLDD--GSTA-ESTRN-NGKPALFRLGDGSLSEGLEQQLLGLKVGDKKTFSLEPEAAFGVPS 75 (156)
T ss_pred cCCCCEEEEEEEEEeCC--CCEE-EECCC-CCCCEEEEeCCCCccHHHHHHHcCCCCCCEEEEEEChHHhcCCCC
Confidence 58899999999999976 9999 77765 479999999999999999999999999999999999999999865
No 21
>COG1047 SlpA FKBP-type peptidyl-prolyl cis-trans isomerases 2 [Posttranslational modification, protein turnover, chaperones]
Probab=99.56 E-value=5.3e-14 Score=122.95 Aligned_cols=85 Identities=26% Similarity=0.425 Sum_probs=74.1
Q ss_pred CCCCCCEEEEEEEEEecCCcEEEecccCCCCCCccEEEEcCCCcchhhHHHHhcCCCCCcEEEEEEccCcccCCCCCCCC
Q 014473 44 TPSDGDQVAYHCTVRTLDGVIVESTRSEYGGKGIPIRHVLGKSKILLGLLEGIPTMLKGEVSMFKMKPQMHYGEDDCPVA 123 (424)
Q Consensus 44 ~p~~gd~V~i~Y~~~~~dG~~~dst~~~~~~~~~p~~~~lG~~~~i~gle~al~~m~~Ge~~~i~ip~~~~yg~~g~~~~ 123 (424)
++++||.|+++|++++.||++||+|.. ...|+.|.+|.+++++||++||.+|.+|++.++.|||+.|||++
T Consensus 2 ~i~k~~~V~i~Y~~~~~dg~v~Dtt~e----~~~P~~~i~G~g~li~glE~al~g~~~Ge~~~V~IpPE~AfGe~----- 72 (174)
T COG1047 2 KIEKGDVVSLHYTLKVEDGEVVDTTDE----NYGPLTFIVGAGQLIPGLEEALLGKEVGEEFTVEIPPEDAFGEY----- 72 (174)
T ss_pred cccCCCEEEEEEEEEecCCcEEEcccc----cCCCeEEEecCCCcchhHHHHHhCCCCCceeEEEeCchHhcCCC-----
Confidence 378999999999999999999999976 46799999999999999999999999999999999999999975
Q ss_pred CCCCCCccccceeeeeeeeee
Q 014473 124 APSTFPKDEELHFEIEMIDFA 144 (424)
Q Consensus 124 ~~~~ip~~~~l~~~iel~~i~ 144 (424)
+..++-.+.+-.+.
T Consensus 73 -------~~~lvq~vp~~~F~ 86 (174)
T COG1047 73 -------DPDLVQRVPRDEFQ 86 (174)
T ss_pred -------ChHHeEEecHHHhC
Confidence 34565555554443
No 22
>KOG0545 consensus Aryl-hydrocarbon receptor-interacting protein [Posttranslational modification, protein turnover, chaperones]
Probab=99.54 E-value=9.1e-16 Score=139.31 Aligned_cols=153 Identities=24% Similarity=0.249 Sum_probs=124.8
Q ss_pred CCCceEEEEEeCCCCCCCCCCCCCCCeEEEEEEEEEeCCCCcEEEeecCCCCCCCeEEEeCCCCcchhHHHHHhccCCCc
Q 014473 265 GDGRLIKRRIRDGKGEFPMDCPLHDSLLCVHYKGMLLNEEKKVFYDTRVDNDGQPLEFSSGEGLVPEGFEMCVRLMLPGE 344 (424)
Q Consensus 265 ~d~~v~k~il~~G~G~~~~~~p~~g~~V~v~y~g~~~~~~g~~f~ds~~~~~~~p~~~~lG~~~~~~gle~~L~~m~~Ge 344 (424)
.-.++.|+||..|+|.-+ + -..|..|.+||.....++.++++|||.. .|+|+.+.+|...-++-||..|.+|.++|
T Consensus 8 ~~~gv~Kril~~G~g~l~-e-~~dGTrv~FHfrtl~~~e~~tviDDsRk--~gkPmeiiiGkkFkL~VwE~il~tM~v~E 83 (329)
T KOG0545|consen 8 NVEGVKKRILHGGTGELP-E-FIDGTRVIFHFRTLKCDEERTVIDDSRK--VGKPMEIIIGKKFKLEVWEIILTTMRVHE 83 (329)
T ss_pred cchhhhHhhccCCCccCc-c-ccCCceEEEEEEecccCcccccccchhh--cCCCeEEeeccccccHHHHHHHHHHhhhh
Confidence 346899999999999754 2 3589999999999988867889977765 48999999999999999999999999999
Q ss_pred EEEEEecCCC--------------cccCC--------------------CC---CCCCCCCCeEEEEEEEEeeecC----
Q 014473 345 IALVTCPPDY--------------AYDKF--------------------LR---PANVPEGAHIQWEIELLGFEKP---- 383 (424)
Q Consensus 345 ~~~i~ip~~~--------------~yg~~--------------------~~---~~~ip~~~~l~f~Vel~~~~~~---- 383 (424)
.+.|+|.... +-|.. |. ......-++|+|.++|++++.|
T Consensus 84 vaqF~~d~~~~vqYPfvsksLRdia~GK~p~e~~~H~Cg~a~m~~~~glGyedLDeL~knPqpL~FviellqVe~P~qYq 163 (329)
T KOG0545|consen 84 VAQFWCDTIHTVQYPFVSKSLRDIAQGKDPTEWHRHCCGLANMFAYHGLGYEDLDELQKNPQPLVFVIELLQVEAPSQYQ 163 (329)
T ss_pred HHHhhhhhhheeechhHHHHHHHHhcCCCcchhhhhhhhhHHHHHhcCCChhhHHHHhhCCCceEeehhhhhccCchhhc
Confidence 9999776421 11111 10 0012223789999999999975
Q ss_pred CCCCCCCHhhHHHHHHHhhhcccccccccceeEeeecc
Q 014473 384 KDWTGLSFDGIMDEAEKIRVTVCTLGPFIYFMMISDCS 421 (424)
Q Consensus 384 ~~~~~~~~~e~l~~a~~~k~~gn~~~~~~~~~~~~~~~ 421 (424)
.+.|+|+.+||+...+.++.+||.|+..+.|.-+++|-
T Consensus 164 ~e~WqlsddeKmkav~~l~q~GN~lfk~~~ykEA~~~Y 201 (329)
T KOG0545|consen 164 RETWQLSDDEKMKAVPVLHQEGNRLFKLGRYKEASSKY 201 (329)
T ss_pred cccccCCchHhhhhhHHHHHhhhhhhhhccHHHHHHHH
Confidence 57899999999999999999999999999999888873
No 23
>PRK10737 FKBP-type peptidyl-prolyl cis-trans isomerase; Provisional
Probab=99.49 E-value=4.8e-13 Score=120.52 Aligned_cols=83 Identities=23% Similarity=0.299 Sum_probs=73.4
Q ss_pred CCCCCCEEEEEEEEEecCCcEEEecccCCCCCCccEEEEcCCCcchhhHHHHhcCCCCCcEEEEEEccCcccCCCCCCCC
Q 014473 44 TPSDGDQVAYHCTVRTLDGVIVESTRSEYGGKGIPIRHVLGKSKILLGLLEGIPTMLKGEVSMFKMKPQMHYGEDDCPVA 123 (424)
Q Consensus 44 ~p~~gd~V~i~Y~~~~~dG~~~dst~~~~~~~~~p~~~~lG~~~~i~gle~al~~m~~Ge~~~i~ip~~~~yg~~g~~~~ 123 (424)
+++++++|+|+|++++.||++|++|+. ..|+.|.+|.++++++|+++|.+|++|++++|.|||+.|||++
T Consensus 2 kI~~~~vV~l~Y~l~~~dG~v~dst~~-----~~Pl~~~~G~g~lipglE~aL~G~~~Gd~~~v~l~peeAyGe~----- 71 (196)
T PRK10737 2 KVAKDLVVSLAYQVRTEDGVLVDESPV-----SAPLDYLHGHGSLISGLETALEGHEVGDKFDVAVGANDAYGQY----- 71 (196)
T ss_pred ccCCCCEEEEEEEEEeCCCCEEEecCC-----CCCeEEEeCCCcchHHHHHHHcCCCCCCEEEEEEChHHhcCCC-----
Confidence 468899999999999999999999974 5799999999999999999999999999999999999999975
Q ss_pred CCCCCCccccceeeeeeeee
Q 014473 124 APSTFPKDEELHFEIEMIDF 143 (424)
Q Consensus 124 ~~~~ip~~~~l~~~iel~~i 143 (424)
+..++..+....+
T Consensus 72 -------d~~lV~~vpr~~F 84 (196)
T PRK10737 72 -------DENLVQRVPKDVF 84 (196)
T ss_pred -------ChHHEEEecHHHC
Confidence 4566666655544
No 24
>COG1047 SlpA FKBP-type peptidyl-prolyl cis-trans isomerases 2 [Posttranslational modification, protein turnover, chaperones]
Probab=99.43 E-value=7e-13 Score=115.96 Aligned_cols=71 Identities=25% Similarity=0.354 Sum_probs=65.5
Q ss_pred CCCCCeEEEEEEEEEeCCCCcEEEeecCCCCCCCeEEEeCCCCcchhHHHHHhccCCCcEEEEEecCCCcccCCC
Q 014473 286 PLHDSLLCVHYKGMLLNEEKKVFYDTRVDNDGQPLEFSSGEGLVPEGFEMCVRLMLPGEIALVTCPPDYAYDKFL 360 (424)
Q Consensus 286 p~~g~~V~v~y~g~~~~~~g~~f~ds~~~~~~~p~~~~lG~~~~~~gle~~L~~m~~Ge~~~i~ip~~~~yg~~~ 360 (424)
...|+.|++||++++.| |++| |||.. ..+|+.|.+|.+++++|||++|.+|.+|++..+.|||+.|||...
T Consensus 3 i~k~~~V~i~Y~~~~~d--g~v~-Dtt~e-~~~P~~~i~G~g~li~glE~al~g~~~Ge~~~V~IpPE~AfGe~~ 73 (174)
T COG1047 3 IEKGDVVSLHYTLKVED--GEVV-DTTDE-NYGPLTFIVGAGQLIPGLEEALLGKEVGEEFTVEIPPEDAFGEYD 73 (174)
T ss_pred ccCCCEEEEEEEEEecC--CcEE-Ecccc-cCCCeEEEecCCCcchhHHHHHhCCCCCceeEEEeCchHhcCCCC
Confidence 47899999999999987 9999 77764 368999999999999999999999999999999999999999875
No 25
>PRK10737 FKBP-type peptidyl-prolyl cis-trans isomerase; Provisional
Probab=99.39 E-value=1.6e-12 Score=117.17 Aligned_cols=70 Identities=19% Similarity=0.260 Sum_probs=64.3
Q ss_pred CCCCCeEEEEEEEEEeCCCCcEEEeecCCCCCCCeEEEeCCCCcchhHHHHHhccCCCcEEEEEecCCCcccCCC
Q 014473 286 PLHDSLLCVHYKGMLLNEEKKVFYDTRVDNDGQPLEFSSGEGLVPEGFEMCVRLMLPGEIALVTCPPDYAYDKFL 360 (424)
Q Consensus 286 p~~g~~V~v~y~g~~~~~~g~~f~ds~~~~~~~p~~~~lG~~~~~~gle~~L~~m~~Ge~~~i~ip~~~~yg~~~ 360 (424)
...++.|+|+|++++.+ |++| |++.. .+|+.|.+|.++++|+||++|.+|++|++.+|.|||+.|||...
T Consensus 3 I~~~~vV~l~Y~l~~~d--G~v~-dst~~--~~Pl~~~~G~g~lipglE~aL~G~~~Gd~~~v~l~peeAyGe~d 72 (196)
T PRK10737 3 VAKDLVVSLAYQVRTED--GVLV-DESPV--SAPLDYLHGHGSLISGLETALEGHEVGDKFDVAVGANDAYGQYD 72 (196)
T ss_pred cCCCCEEEEEEEEEeCC--CCEE-EecCC--CCCeEEEeCCCcchHHHHHHHcCCCCCCEEEEEEChHHhcCCCC
Confidence 36889999999999976 9999 77754 68999999999999999999999999999999999999999875
No 26
>TIGR00115 tig trigger factor. Trigger factor is a ribosome-associated molecular chaperone and is the first chaperone to interact with nascent polypeptide. Trigger factor can bind at the same time as the signal recognition particle (SRP), but is excluded by the SRP receptor (FtsY). The central domain of trigger factor has peptidyl-prolyl cis/trans isomerase activity. This protein is found in a single copy in virtually every bacterial genome.
Probab=98.77 E-value=6e-08 Score=98.80 Aligned_cols=86 Identities=14% Similarity=0.247 Sum_probs=75.1
Q ss_pred CCCCCeEEEEEEEEEeCCCCcEEEeecCCCCCCCeEEEeCCCCcchhHHHHHhccCCCcEEEEEecCCCcccCCCCCCCC
Q 014473 286 PLHDSLLCVHYKGMLLNEEKKVFYDTRVDNDGQPLEFSSGEGLVPEGFEMCVRLMLPGEIALVTCPPDYAYDKFLRPANV 365 (424)
Q Consensus 286 p~~g~~V~v~y~g~~~~~~g~~f~ds~~~~~~~p~~~~lG~~~~~~gle~~L~~m~~Ge~~~i~ip~~~~yg~~~~~~~i 365 (424)
+..||.|+++|+++. + |+.| +++. .+++.|.+|.+.+++||+.+|.||++|+++.|.+++...|+....
T Consensus 147 ~~~gD~V~v~~~~~~-d--g~~~-~~~~---~~~~~~~lg~~~~~~~~ee~L~G~k~Gd~~~~~v~~p~~~~~~~~---- 215 (408)
T TIGR00115 147 AEKGDRVTIDFEGFI-D--GEAF-EGGK---AENFSLELGSGQFIPGFEEQLVGMKAGEEKEIKVTFPEDYHAEEL---- 215 (408)
T ss_pred cCCCCEEEEEEEEEE-C--CEEC-cCCC---CCCeEEEECCCCcchhHHHHhCCCCCCCeeEEEecCccccCcccC----
Confidence 588999999999976 4 8888 5542 478999999999999999999999999999999998888987654
Q ss_pred CCCCeEEEEEEEEeeecC
Q 014473 366 PEGAHIQWEIELLGFEKP 383 (424)
Q Consensus 366 p~~~~l~f~Vel~~~~~~ 383 (424)
+|.++.|+|+|++|.+.
T Consensus 216 -~gk~~~f~v~i~~I~~~ 232 (408)
T TIGR00115 216 -AGKEATFKVTVKEVKEK 232 (408)
T ss_pred -CCCeEEEEEEEEEeccC
Confidence 35899999999999764
No 27
>PRK01490 tig trigger factor; Provisional
Probab=98.71 E-value=1.2e-07 Score=97.45 Aligned_cols=86 Identities=14% Similarity=0.220 Sum_probs=74.7
Q ss_pred CCCCCeEEEEEEEEEeCCCCcEEEeecCCCCCCCeEEEeCCCCcchhHHHHHhccCCCcEEEEEecCCCcccCCCCCCCC
Q 014473 286 PLHDSLLCVHYKGMLLNEEKKVFYDTRVDNDGQPLEFSSGEGLVPEGFEMCVRLMLPGEIALVTCPPDYAYDKFLRPANV 365 (424)
Q Consensus 286 p~~g~~V~v~y~g~~~~~~g~~f~ds~~~~~~~p~~~~lG~~~~~~gle~~L~~m~~Ge~~~i~ip~~~~yg~~~~~~~i 365 (424)
+..||.|+++|++.. + |+.| +++. .+++.|.+|.+.+++||+++|.||++|+++.|.+++...|+.....
T Consensus 158 ~~~gD~V~vd~~~~~-~--g~~~-~~~~---~~~~~~~lg~~~~~~~fee~L~G~k~Ge~~~~~~~~p~~~~~~~la--- 227 (435)
T PRK01490 158 AENGDRVTIDFVGSI-D--GEEF-EGGK---AEDFSLELGSGRFIPGFEEQLVGMKAGEEKTIDVTFPEDYHAEDLA--- 227 (435)
T ss_pred CCCCCEEEEEEEEEE-C--CEEC-cCCC---CCceEEEEcCCCcchhHHHHhCCCCCCCeeEEEecCccccccccCC---
Confidence 589999999999997 4 8888 5442 4689999999999999999999999999999999888888776544
Q ss_pred CCCCeEEEEEEEEeeecC
Q 014473 366 PEGAHIQWEIELLGFEKP 383 (424)
Q Consensus 366 p~~~~l~f~Vel~~~~~~ 383 (424)
|.++.|.|+|.++.+.
T Consensus 228 --gk~~~f~v~v~~V~~~ 243 (435)
T PRK01490 228 --GKEATFKVTVKEVKEK 243 (435)
T ss_pred --CCeEEEEEEEEEeccC
Confidence 4899999999999864
No 28
>TIGR00115 tig trigger factor. Trigger factor is a ribosome-associated molecular chaperone and is the first chaperone to interact with nascent polypeptide. Trigger factor can bind at the same time as the signal recognition particle (SRP), but is excluded by the SRP receptor (FtsY). The central domain of trigger factor has peptidyl-prolyl cis/trans isomerase activity. This protein is found in a single copy in virtually every bacterial genome.
Probab=98.66 E-value=6.4e-08 Score=98.56 Aligned_cols=98 Identities=19% Similarity=0.264 Sum_probs=81.6
Q ss_pred CCCCCEEEEEEEEEecCCcEEEecccCCCCCCccEEEEcCCCcchhhHHHHhcCCCCCcEEEEEEccCcccCCCCCCCCC
Q 014473 45 PSDGDQVAYHCTVRTLDGVIVESTRSEYGGKGIPIRHVLGKSKILLGLLEGIPTMLKGEVSMFKMKPQMHYGEDDCPVAA 124 (424)
Q Consensus 45 p~~gd~V~i~Y~~~~~dG~~~dst~~~~~~~~~p~~~~lG~~~~i~gle~al~~m~~Ge~~~i~ip~~~~yg~~g~~~~~ 124 (424)
++.||.|+++|+++. ||..|+++. ..++.|.+|.+.+++||+++|.||++|++++|.++....|+....
T Consensus 147 ~~~gD~V~v~~~~~~-dg~~~~~~~------~~~~~~~lg~~~~~~~~ee~L~G~k~Gd~~~~~v~~p~~~~~~~~---- 215 (408)
T TIGR00115 147 AEKGDRVTIDFEGFI-DGEAFEGGK------AENFSLELGSGQFIPGFEEQLVGMKAGEEKEIKVTFPEDYHAEEL---- 215 (408)
T ss_pred cCCCCEEEEEEEEEE-CCEECcCCC------CCCeEEEECCCCcchhHHHHhCCCCCCCeeEEEecCccccCcccC----
Confidence 789999999999975 898888654 357999999999999999999999999999999998888987654
Q ss_pred CCCCCccccceeeeeeeeeeccceeccccceeEE
Q 014473 125 PSTFPKDEELHFEIEMIDFAKAKIIADDFGVVKK 158 (424)
Q Consensus 125 ~~~ip~~~~l~~~iel~~i~~~~~~~~D~~v~k~ 158 (424)
+|.++.|.|+|.+|.....+.-|..+.+.
T Consensus 216 -----~gk~~~f~v~i~~I~~~~~peldDefak~ 244 (408)
T TIGR00115 216 -----AGKEATFKVTVKEVKEKELPELDDEFAKE 244 (408)
T ss_pred -----CCCeEEEEEEEEEeccCCCCCCCHHHHHh
Confidence 58999999999999876544334343333
No 29
>COG0544 Tig FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor) [Posttranslational modification, protein turnover, chaperones]
Probab=98.61 E-value=1.9e-07 Score=94.90 Aligned_cols=92 Identities=14% Similarity=0.192 Sum_probs=75.5
Q ss_pred CCCCeEEEEEEEEEeCCCCcEEEeecCCCCCCCeEEEeCCCCcchhHHHHHhccCCCcEEEEEecCCCcccCCCCCCCCC
Q 014473 287 LHDSLLCVHYKGMLLNEEKKVFYDTRVDNDGQPLEFSSGEGLVPEGFEMCVRLMLPGEIALVTCPPDYAYDKFLRPANVP 366 (424)
Q Consensus 287 ~~g~~V~v~y~g~~~~~~g~~f~ds~~~~~~~p~~~~lG~~~~~~gle~~L~~m~~Ge~~~i~ip~~~~yg~~~~~~~ip 366 (424)
..||.|+|+|.|+. ||..| .+.. .+.+.|.||++++||||+.+|.||++|+...|.+.....|....+.+
T Consensus 159 ~~gD~v~IDf~g~i---Dg~~f-egg~---ae~~~l~lGs~~fipgFe~~LvG~k~Ge~k~i~vtFP~dy~a~~LaG--- 228 (441)
T COG0544 159 ENGDRVTIDFEGSV---DGEEF-EGGK---AENFSLELGSGRFIPGFEDQLVGMKAGEEKDIKVTFPEDYHAEELAG--- 228 (441)
T ss_pred ccCCEEEEEEEEEE---cCeec-cCcc---ccCeEEEEcCCCchhhHHhhhccCcCCCeeEEEEEcccccchhHhCC---
Confidence 79999999999976 48888 5442 46899999999999999999999999999998777666777766554
Q ss_pred CCCeEEEEEEEEeeecCCCCCCCCH
Q 014473 367 EGAHIQWEIELLGFEKPKDWTGLSF 391 (424)
Q Consensus 367 ~~~~l~f~Vel~~~~~~~~~~~~~~ 391 (424)
.+..|.|+|.+|.+.. +.+|++
T Consensus 229 --K~a~F~V~vkeVk~~e-lpEldD 250 (441)
T COG0544 229 --KEATFKVKVKEVKKRE-LPELDD 250 (441)
T ss_pred --CceEEEEEEEEEeecC-CCCCCH
Confidence 8999999999997643 344544
No 30
>PRK01490 tig trigger factor; Provisional
Probab=98.56 E-value=1.8e-07 Score=96.04 Aligned_cols=94 Identities=19% Similarity=0.277 Sum_probs=79.3
Q ss_pred CCCCCEEEEEEEEEecCCcEEEecccCCCCCCccEEEEcCCCcchhhHHHHhcCCCCCcEEEEEEccCcccCCCCCCCCC
Q 014473 45 PSDGDQVAYHCTVRTLDGVIVESTRSEYGGKGIPIRHVLGKSKILLGLLEGIPTMLKGEVSMFKMKPQMHYGEDDCPVAA 124 (424)
Q Consensus 45 p~~gd~V~i~Y~~~~~dG~~~dst~~~~~~~~~p~~~~lG~~~~i~gle~al~~m~~Ge~~~i~ip~~~~yg~~g~~~~~ 124 (424)
++.||.|+++|+++. ||+.|+++. ..++.|.+|.+++++||+++|.||++|+++.|.++....|+...+
T Consensus 158 ~~~gD~V~vd~~~~~-~g~~~~~~~------~~~~~~~lg~~~~~~~fee~L~G~k~Ge~~~~~~~~p~~~~~~~l---- 226 (435)
T PRK01490 158 AENGDRVTIDFVGSI-DGEEFEGGK------AEDFSLELGSGRFIPGFEEQLVGMKAGEEKTIDVTFPEDYHAEDL---- 226 (435)
T ss_pred CCCCCEEEEEEEEEE-CCEECcCCC------CCceEEEEcCCCcchhHHHHhCCCCCCCeeEEEecCccccccccC----
Confidence 799999999999996 888887654 357999999999999999999999999999999998888876554
Q ss_pred CCCCCccccceeeeeeeeeeccceeccccc
Q 014473 125 PSTFPKDEELHFEIEMIDFAKAKIIADDFG 154 (424)
Q Consensus 125 ~~~ip~~~~l~~~iel~~i~~~~~~~~D~~ 154 (424)
+|.++.|.|+|.+|.....+.-|..
T Consensus 227 -----agk~~~f~v~v~~V~~~~~pel~De 251 (435)
T PRK01490 227 -----AGKEATFKVTVKEVKEKELPELDDE 251 (435)
T ss_pred -----CCCeEEEEEEEEEeccCCCCCCCHH
Confidence 4899999999999987654333333
No 31
>COG0544 Tig FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor) [Posttranslational modification, protein turnover, chaperones]
Probab=98.48 E-value=2.7e-07 Score=93.90 Aligned_cols=97 Identities=21% Similarity=0.291 Sum_probs=78.8
Q ss_pred CCCCCEEEEEEEEEecCCcEEEecccCCCCCCccEEEEcCCCcchhhHHHHhcCCCCCcEEEEEEccCcccCCCCCCCCC
Q 014473 45 PSDGDQVAYHCTVRTLDGVIVESTRSEYGGKGIPIRHVLGKSKILLGLLEGIPTMLKGEVSMFKMKPQMHYGEDDCPVAA 124 (424)
Q Consensus 45 p~~gd~V~i~Y~~~~~dG~~~dst~~~~~~~~~p~~~~lG~~~~i~gle~al~~m~~Ge~~~i~ip~~~~yg~~g~~~~~ 124 (424)
++.||.|+|+|.++ .||..|... ....+.+.||++++|+||+.+|.||++|+.+.|.+.....|...-+
T Consensus 158 a~~gD~v~IDf~g~-iDg~~fegg------~ae~~~l~lGs~~fipgFe~~LvG~k~Ge~k~i~vtFP~dy~a~~L---- 226 (441)
T COG0544 158 AENGDRVTIDFEGS-VDGEEFEGG------KAENFSLELGSGRFIPGFEDQLVGMKAGEEKDIKVTFPEDYHAEEL---- 226 (441)
T ss_pred cccCCEEEEEEEEE-EcCeeccCc------cccCeEEEEcCCCchhhHHhhhccCcCCCeeEEEEEcccccchhHh----
Confidence 68999999999996 588888744 3457999999999999999999999999999987776666765544
Q ss_pred CCCCCccccceeeeeeeeeeccceeccccceeE
Q 014473 125 PSTFPKDEELHFEIEMIDFAKAKIIADDFGVVK 157 (424)
Q Consensus 125 ~~~ip~~~~l~~~iel~~i~~~~~~~~D~~v~k 157 (424)
+|.+..|.|+|..|.....+.-|..+.+
T Consensus 227 -----aGK~a~F~V~vkeVk~~elpEldDEfAk 254 (441)
T COG0544 227 -----AGKEATFKVKVKEVKKRELPELDDEFAK 254 (441)
T ss_pred -----CCCceEEEEEEEEEeecCCCCCCHHHHH
Confidence 4889999999999988765544444333
No 32
>KOG0545 consensus Aryl-hydrocarbon receptor-interacting protein [Posttranslational modification, protein turnover, chaperones]
Probab=97.51 E-value=3.3e-05 Score=71.19 Aligned_cols=82 Identities=23% Similarity=0.310 Sum_probs=71.3
Q ss_pred eecCCceEEEEEecCCCCC-CCCCCCEEEEEEEEEecC--CcEEEecccCCCCCCccEEEEcCCCcchhhHHHHhcCCCC
Q 014473 25 KIVPGSLMKAVMRPGGGDS-TPSDGDQVAYHCTVRTLD--GVIVESTRSEYGGKGIPIRHVLGKSKILLGLLEGIPTMLK 101 (424)
Q Consensus 25 ~~~~~gl~~~il~~G~G~~-~p~~gd~V~i~Y~~~~~d--G~~~dst~~~~~~~~~p~~~~lG~~~~i~gle~al~~m~~ 101 (424)
.+.-.|+.++|+..|.|.- ....|..|.+||.....+ ++++|+|+. .|+|+.+++|...-++-||..|..|++
T Consensus 6 ~l~~~gv~Kril~~G~g~l~e~~dGTrv~FHfrtl~~~e~~tviDDsRk----~gkPmeiiiGkkFkL~VwE~il~tM~v 81 (329)
T KOG0545|consen 6 LLNVEGVKKRILHGGTGELPEFIDGTRVIFHFRTLKCDEERTVIDDSRK----VGKPMEIIIGKKFKLEVWEIILTTMRV 81 (329)
T ss_pred hccchhhhHhhccCCCccCccccCCceEEEEEEecccCcccccccchhh----cCCCeEEeeccccccHHHHHHHHHHhh
Confidence 3456789999999999984 246999999999987754 578999998 799999999999999999999999999
Q ss_pred CcEEEEEEc
Q 014473 102 GEVSMFKMK 110 (424)
Q Consensus 102 Ge~~~i~ip 110 (424)
+|.+.|.+.
T Consensus 82 ~EvaqF~~d 90 (329)
T KOG0545|consen 82 HEVAQFWCD 90 (329)
T ss_pred hhHHHhhhh
Confidence 999888765
No 33
>PF09122 DUF1930: Domain of unknown function (DUF1930); InterPro: IPR015206 This entry represents a domain found in 3-mercaptopyruvate sulphurtransferase which has no known function. This domain adopts a structure consisting of a four-stranded antiparallel beta-sheet and an alpha-helix, arranged in a beta(2)-alpha-beta(2) fashion, and bearing a remarkable structural similarity to the FK506-binding protein class of peptidylprolyl cis/trans-isomerase []. ; PDB: 1OKG_A.
Probab=62.19 E-value=8.4 Score=27.93 Aligned_cols=23 Identities=26% Similarity=0.329 Sum_probs=18.6
Q ss_pred hhHHHHHhccccccEEEEEEecc
Q 014473 209 KGLEMGIGTMTREEKAVIYVTSQ 231 (424)
Q Consensus 209 ~gl~~~l~~M~~Ge~a~~~vp~~ 231 (424)
.-|..|+..|+.||+++++++|.
T Consensus 35 ~El~sA~~HlH~GEkA~V~FkS~ 57 (68)
T PF09122_consen 35 AELKSALVHLHIGEKAQVFFKSQ 57 (68)
T ss_dssp HHHHHHHTT-BTT-EEEEEETTS
T ss_pred HHHHHHHHHhhcCceeEEEEecC
Confidence 46889999999999999999876
No 34
>TIGR00990 3a0801s09 mitochondrial precursor proteins import receptor (72 kDa mitochondrial outermembrane protein) (mitochondrial import receptor for the ADP/ATP carrier) (translocase of outermembrane tom70).
Probab=57.20 E-value=3 Score=44.80 Aligned_cols=56 Identities=16% Similarity=0.025 Sum_probs=45.7
Q ss_pred CCCCCCeEEEEEEEEeeecCCCCCCCCHhhHHHHHHHhhhcccccccccceeEeeec
Q 014473 364 NVPEGAHIQWEIELLGFEKPKDWTGLSFDGIMDEAEKIRVTVCTLGPFIYFMMISDC 420 (424)
Q Consensus 364 ~ip~~~~l~f~Vel~~~~~~~~~~~~~~~e~l~~a~~~k~~gn~~~~~~~~~~~~~~ 420 (424)
.+|+..++....++.++.. +..|.|+.+++.+.+...|+.||.++..+.|..+..|
T Consensus 94 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~a~~~k~~G~~~~~~~~~~~Ai~~ 149 (615)
T TIGR00990 94 TAPKNAPVEPADELPEIDE-SSVANLSEEERKKYAAKLKEKGNKAYRNKDFNKAIKL 149 (615)
T ss_pred CCCCCCCCCccccccccch-hhcccCCHHHHHHHHHHHHHHHHHHHHcCCHHHHHHH
Confidence 3566677777777766644 5568899999999999999999999999999877665
No 35
>KOG4648 consensus Uncharacterized conserved protein, contains LRR repeats [Function unknown]
Probab=52.65 E-value=4.6 Score=39.76 Aligned_cols=34 Identities=15% Similarity=0.060 Sum_probs=30.6
Q ss_pred CCHhhHHHHHHHhhhcccccccccceeEeeeccc
Q 014473 389 LSFDGIMDEAEKIRVTVCTLGPFIYFMMISDCST 422 (424)
Q Consensus 389 ~~~~e~l~~a~~~k~~gn~~~~~~~~~~~~~~~~ 422 (424)
.=.++.|..++..||+||.+++-+-|.-+.||-+
T Consensus 88 ~I~~~LL~~~SEiKE~GN~yFKQgKy~EAIDCYs 121 (536)
T KOG4648|consen 88 PIAQQLLKKASEIKERGNTYFKQGKYEEAIDCYS 121 (536)
T ss_pred HHHHHHHHhhHHHHHhhhhhhhccchhHHHHHhh
Confidence 3368899999999999999999999999999964
No 36
>KOG0551 consensus Hsp90 co-chaperone CNS1 (contains TPR repeats) [Posttranslational modification, protein turnover, chaperones]
Probab=26.93 E-value=13 Score=36.66 Aligned_cols=27 Identities=11% Similarity=-0.063 Sum_probs=24.6
Q ss_pred HHHHHhhhcccccccccceeEeeeccc
Q 014473 396 DEAEKIRVTVCTLGPFIYFMMISDCST 422 (424)
Q Consensus 396 ~~a~~~k~~gn~~~~~~~~~~~~~~~~ 422 (424)
+.|...|+.||.+++++.|-||..|-|
T Consensus 79 E~Aen~KeeGN~~fK~Kryk~A~~~Yt 105 (390)
T KOG0551|consen 79 EQAENYKEEGNEYFKEKRYKDAVESYT 105 (390)
T ss_pred HHHHHHHHHhHHHHHhhhHHHHHHHHH
Confidence 379999999999999999999998865
No 37
>cd04331 RNAP_E_N RNAP_E_N: RpoE, N-terminal ribonucleoprotein (RNP) domain. RpoE (subunit E) is a subunit of the archaeal RNA polymerase (RNAP) that is homologous to Rpb7 of eukaryotic RNAP II, Rpc25 of eukaryotic RNAP III, and Rpa43 of eukaryotic RNAP I. RpoE heterodimerizes with RpoF, another RNA polymerase subunit. RpoE has an elongated two-domain structure that includes an N-terminal RNP domain and a C-terminal oligonucleotide-binding (OB) domain. Both domains of RpoE bind single-stranded RNA.
Probab=21.01 E-value=2.1e+02 Score=21.87 Aligned_cols=48 Identities=15% Similarity=0.045 Sum_probs=38.0
Q ss_pred EEEEEEeeec-CCCCCCCCHhhHHHHHHHhhhcccccccccceeEeeec
Q 014473 373 WEIELLGFEK-PKDWTGLSFDGIMDEAEKIRVTVCTLGPFIYFMMISDC 420 (424)
Q Consensus 373 f~Vel~~~~~-~~~~~~~~~~e~l~~a~~~k~~gn~~~~~~~~~~~~~~ 420 (424)
|.++|.+.-+ ++.....+.++.+....+.|-.|...++.+|.+++.|.
T Consensus 2 ~~~~l~d~vri~P~~fg~~~~~~i~~~L~~~~egk~~~~~G~iv~v~di 50 (80)
T cd04331 2 KLVELEDVVRVPPELFGEDLEEAVLEILKEKYEGRLDKDLGKIVSVLDV 50 (80)
T ss_pred EEEEEEEeEEECHHHcCcCHHHHHHHHHHHHhcCcCcCCCCEEEEEEEE
Confidence 3455555444 45567789999999999999999999999999998764
No 38
>PHA02122 hypothetical protein
Probab=20.96 E-value=1.6e+02 Score=20.87 Aligned_cols=20 Identities=25% Similarity=0.503 Sum_probs=16.3
Q ss_pred CCCCEEEEEEEEEecCCcEEE
Q 014473 46 SDGDQVAYHCTVRTLDGVIVE 66 (424)
Q Consensus 46 ~~gd~V~i~Y~~~~~dG~~~d 66 (424)
..||.|.++|+... ||+.|-
T Consensus 39 ~~gd~v~vn~e~~~-ng~l~i 58 (65)
T PHA02122 39 DDGDEVIVNFELVV-NGKLII 58 (65)
T ss_pred cCCCEEEEEEEEEE-CCEEEE
Confidence 57899999999885 777664
No 39
>KOG0547 consensus Translocase of outer mitochondrial membrane complex, subunit TOM70/TOM72 [Intracellular trafficking, secretion, and vesicular transport]
Probab=20.94 E-value=30 Score=35.90 Aligned_cols=36 Identities=6% Similarity=-0.114 Sum_probs=30.2
Q ss_pred CCCCHhhHHHHHHHhhhcccccccccceeEeeeccc
Q 014473 387 TGLSFDGIMDEAEKIRVTVCTLGPFIYFMMISDCST 422 (424)
Q Consensus 387 ~~~~~~e~l~~a~~~k~~gn~~~~~~~~~~~~~~~~ 422 (424)
-.|+.++|++.|...|.+||.++..+-|.-+..|-|
T Consensus 104 ~a~~~e~~~k~A~~lK~~GN~~f~~kkY~eAIkyY~ 139 (606)
T KOG0547|consen 104 KAMLKEERLKYAAALKTKGNKFFRNKKYDEAIKYYT 139 (606)
T ss_pred hccChHHHHHHHHHHHhhhhhhhhcccHHHHHHHHH
Confidence 458899999999999999999998887766666544
Done!