BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 014476
(424 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q6P988|NOTUM_HUMAN Protein notum homolog OS=Homo sapiens GN=NOTUM PE=2 SV=2
Length = 496
Score = 107 bits (268), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 113/433 (26%), Positives = 168/433 (38%), Gaps = 59/433 (13%)
Query: 19 AIAAVGFTIIIFVLTFFFDSSSTDGAASSVNLPASDLVDLTL--------LHNAKDRGAL 70
A A G + F L F + D + V A L + LH +
Sbjct: 41 AAPAAGQPVESFPLDFTAVEGNMDSFMAQVKSLAQSLYPCSAQQLNEDLRLHLLLNTSVT 100
Query: 71 CLDGSLPGYHFQKGFGSGSNNWLLHIEGGGWCNTIESCSTRKTTA--LGSSNFMERQVSF 128
C DGS GY+ ++ GS WLL +EGG +C E+C +R T L SS R +
Sbjct: 101 CNDGSPAGYYLKES--RGSRRWLLFLEGGWYCFNRENCDSRYDTMRRLMSSRDWPRTRTG 158
Query: 129 SGILSSDPSQNPDFFSWNKVKIRYCDGASFAGRPESEFKNGTNLFFRGQLIWEALMDELL 188
+GILSS P +NP +++ N V I YC ++G KN F G LI + ++ ELL
Sbjct: 159 TGILSSQPEENPYWWNANMVFIPYCSSDVWSGASSKSEKN--EYAFMGALIIQEVVRELL 216
Query: 189 SVGMSNAKQAFLTGCSAGGLAAVIHCDDFRERLPQHA----TVKCLADASFFLDESDVQG 244
G+S AK L G SAGG +++ D E+L + V+ LAD+ +FLD +
Sbjct: 217 GRGLSGAKVLLLAGSSAGGTGVLLNVDRVAEQLEKLGYPAIQVRGLADSGWFLDNKQYRH 276
Query: 245 NRTM--------RSFYDDVFHLQGVAKSLDRNCLSRMGNSRCLFPREFIKNIRTPVFIVN 296
+ + + + GV R C F + +R PVF+V
Sbjct: 277 TDCVDTITCAPTEAIRRGIRYWNGVVPERCRRQFQEGEEWNCFFGYKVYPTLRCPVFVVQ 336
Query: 297 PAYDFWQIRNILVPDVSDPQGYWQTCRLNIHSCNPNQLEILKGFRNSLLNALSEFQQ--K 354
+D +L + + + + +G R + N E + K
Sbjct: 337 WLFD--------------------EAQLTVDNVHLTGQPVQEGLRLYIQNLGRELRHTLK 376
Query: 355 NEAGMFVNSCYIH----CQTWMAETWHSPSSPRI-----NSKTIAESVGDWYFNRGAVKL 405
+ F +C H W S PR S + V L
Sbjct: 377 DVPASFAPACLSHEIIIRSHWTDVQVKGTSLPRALHCWDRSLHDSHKASKTPLKGCPVHL 436
Query: 406 ID-CPYP-CNPTC 416
+D CP+P CNP+C
Sbjct: 437 VDSCPWPHCNPSC 449
>sp|Q8R116|NOTUM_MOUSE Protein notum homolog OS=Mus musculus GN=Notum PE=2 SV=2
Length = 503
Score = 102 bits (253), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 82/284 (28%), Positives = 127/284 (44%), Gaps = 20/284 (7%)
Query: 52 ASDLVDLTLLHNAKDRGALCLDGSLPGYHFQKGFGSGSNNWLLHIEGGGWCNTIESCSTR 111
A L + LH + C DGS GY+ ++ GS WLL +EGG +C E+C +R
Sbjct: 89 AQQLNEDLRLHLLLNTSVTCNDGSPAGYYLKES--KGSRRWLLFLEGGWYCFNRENCDSR 146
Query: 112 KTTA--LGSSNFMERQVSFSGILSSDPSQNPDFFSWNKVKIRYCDGASFAGRPESEFKNG 169
+T L SS + +GILSS P +NP +++ N V I YC ++G KN
Sbjct: 147 YSTMRRLMSSKDWPHTRTGTGILSSQPEENPHWWNANMVFIPYCSSDVWSGASPKSDKN- 205
Query: 170 TNLFFRGQLIWEALMDELLSVGMSNAKQAFLTGCSAGGLAAVIHCDDFRERLPQ----HA 225
F G LI + ++ ELL G+S AK L G SAGG +++ D E L +
Sbjct: 206 -EYAFMGSLIIQEVVRELLGKGLSGAKVLLLAGSSAGGTGVLLNVDRVAELLEELGYPSI 264
Query: 226 TVKCLADASFFLDESDVQGNRTMRS--------FYDDVFHLQGVAKSLDRNCLSRMGNSR 277
V+ LAD+ +FLD + + + + + + G+ +
Sbjct: 265 QVRGLADSGWFLDNKQYRRSDCIDTINCAPTDAIRRGIRYWSGMVPERCQRQFKEGEEWN 324
Query: 278 CLFPREFIKNIRTPVFIVNPAYDFWQ--IRNILVPDVSDPQGYW 319
C F + +R PVF+V +D Q + N+ + +G W
Sbjct: 325 CFFGYKVYPTLRCPVFVVQWLFDEAQLTVDNVHLTGQPVQEGQW 368
>sp|P37230|PPARA_RAT Peroxisome proliferator-activated receptor alpha OS=Rattus
norvegicus GN=Ppara PE=1 SV=1
Length = 468
Score = 33.9 bits (76), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 69/175 (39%), Gaps = 21/175 (12%)
Query: 143 FSWNKVKIRYCDGASFAGRPESEFKNGTNLFFRGQLIWEALMDELLSVGMSN--AKQAFL 200
F+ NKVK R + P + L + + L+ ++++ G+ N A+ F
Sbjct: 218 FNMNKVKARVILAGKTSNNPPFVIHDMETLC----MAEKTLVAKMVANGVENKEAEVRFF 273
Query: 201 TGCSAGGLAAVIHCDDFRERLPQHATVKCLADASFFLDESDVQGNRTMRSFYDDVFHLQG 260
C + V +F + +P A LD +D Q Y+ +F +
Sbjct: 274 HCCQCMSVETVTELTEFAKAIPGFAN----------LDLND-QVTLLKYGVYEAIFTMLS 322
Query: 261 VAKSLDRNCLSRMGNSRCLFPREFIKNIRTPVF-IVNPAYDFWQIRNILVPDVSD 314
+ D L GN REF+KN+R P I+ P +DF N L D SD
Sbjct: 323 SLMNKD-GMLIAYGNG--FITREFLKNLRKPFCDIMEPKFDFAMKFNALELDDSD 374
>sp|Q04Y45|HRCA_LEPBL Heat-inducible transcription repressor HrcA OS=Leptospira
borgpetersenii serovar Hardjo-bovis (strain L550)
GN=hrcA PE=3 SV=1
Length = 342
Score = 33.9 bits (76), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 33/63 (52%), Gaps = 7/63 (11%)
Query: 298 AYDFWQIRNILVPDV----SDPQGYWQTCRLNIHSCNPNQLEI---LKGFRNSLLNALSE 350
YD ++I+N++VP++ P+ + + L + NP+ E+ + GF+N N E
Sbjct: 188 GYDIYEIQNVVVPNLMVRRDGPEDFTRIAELLSSAMNPDNSEVTLYIDGFKNLYANFRDE 247
Query: 351 FQQ 353
QQ
Sbjct: 248 EQQ 250
>sp|Q04VD0|HRCA_LEPBJ Heat-inducible transcription repressor HrcA OS=Leptospira
borgpetersenii serovar Hardjo-bovis (strain JB197)
GN=hrcA PE=3 SV=1
Length = 342
Score = 33.9 bits (76), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 33/63 (52%), Gaps = 7/63 (11%)
Query: 298 AYDFWQIRNILVPDV----SDPQGYWQTCRLNIHSCNPNQLEI---LKGFRNSLLNALSE 350
YD ++I+N++VP++ P+ + + L + NP+ E+ + GF+N N E
Sbjct: 188 GYDIYEIQNVVVPNLMVRRDGPEDFTRIAELLSSAMNPDNSEVTLYIDGFKNLYANFRDE 247
Query: 351 FQQ 353
QQ
Sbjct: 248 EQQ 250
>sp|P23204|PPARA_MOUSE Peroxisome proliferator-activated receptor alpha OS=Mus musculus
GN=Ppara PE=1 SV=2
Length = 468
Score = 32.0 bits (71), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 69/175 (39%), Gaps = 21/175 (12%)
Query: 143 FSWNKVKIRYCDGASFAGRPESEFKNGTNLFFRGQLIWEALMDELLSVGMSN--AKQAFL 200
F+ NKVK R + P + L + + L+ ++++ G+ + A+ F
Sbjct: 218 FNMNKVKARVILAGKTSNNPPFVIHDMETLC----MAEKTLVAKMVANGVEDKEAEVRFF 273
Query: 201 TGCSAGGLAAVIHCDDFRERLPQHATVKCLADASFFLDESDVQGNRTMRSFYDDVFHLQG 260
C + V +F + +P A LD +D Q Y+ +F +
Sbjct: 274 HCCQCMSVETVTELTEFAKAIPGFAN----------LDLND-QVTLLKYGVYEAIFTMLS 322
Query: 261 VAKSLDRNCLSRMGNSRCLFPREFIKNIRTPVF-IVNPAYDFWQIRNILVPDVSD 314
+ D L GN REF+KN+R P I+ P +DF N L D SD
Sbjct: 323 SLMNKD-GMLIAYGNG--FITREFLKNLRKPFCDIMEPKFDFAMKFNALELDDSD 374
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.323 0.136 0.443
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 165,681,057
Number of Sequences: 539616
Number of extensions: 6952207
Number of successful extensions: 13328
Number of sequences better than 100.0: 15
Number of HSP's better than 100.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 13310
Number of HSP's gapped (non-prelim): 15
length of query: 424
length of database: 191,569,459
effective HSP length: 120
effective length of query: 304
effective length of database: 126,815,539
effective search space: 38551923856
effective search space used: 38551923856
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 63 (28.9 bits)