Citrus Sinensis ID: 014478
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
|
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 424 | 2.2.26 [Sep-21-2011] | |||||||
| Q9FHD7 | 487 | Probable serine/threonine | no | no | 0.908 | 0.790 | 0.733 | 1e-170 | |
| Q944A7 | 512 | Probable serine/threonine | no | no | 0.915 | 0.757 | 0.680 | 1e-156 | |
| Q7XJT7 | 465 | Probable inactive recepto | no | no | 0.886 | 0.808 | 0.488 | 1e-104 | |
| Q9LFP7 | 493 | Probable receptor-like pr | no | no | 0.5 | 0.430 | 0.373 | 3e-31 | |
| Q9SRH7 | 490 | Receptor-like serine/thre | no | no | 0.5 | 0.432 | 0.360 | 7e-31 | |
| Q06548 | 410 | Protein kinase APK1A, chl | no | no | 0.504 | 0.521 | 0.378 | 1e-30 | |
| O49839 | 426 | Protein kinase 2A, chloro | no | no | 0.502 | 0.5 | 0.342 | 2e-30 | |
| O49840 | 426 | Protein kinase 2B, chloro | no | no | 0.504 | 0.502 | 0.343 | 3e-30 | |
| P46573 | 412 | Protein kinase APK1B, chl | no | no | 0.504 | 0.519 | 0.370 | 4e-29 | |
| Q8H186 | 389 | Probable receptor-like pr | no | no | 0.504 | 0.550 | 0.338 | 1e-28 |
| >sp|Q9FHD7|Y5126_ARATH Probable serine/threonine-protein kinase At5g41260 OS=Arabidopsis thaliana GN=At5g41260 PE=1 SV=1 | Back alignment and function desciption |
|---|
Score = 599 bits (1545), Expect = e-170, Method: Compositional matrix adjust.
Identities = 286/390 (73%), Positives = 331/390 (84%), Gaps = 5/390 (1%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQPMKWAMRLRV 92
LEEAKAVG LR+ R+ANL+GCCYE +ERLL+AEFMPNETLAKHLFHWE+QPMKWAMRLRV
Sbjct: 101 LEEAKAVGQLRNHRMANLLGCCYEDEERLLIAEFMPNETLAKHLFHWESQPMKWAMRLRV 160
Query: 93 ALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLAFTP 152
AL++AQALEYC+SKGRALYHDLNAYR+LFD D NPRLS FGLMKNSRDGKSYSTNLAFTP
Sbjct: 161 ALHIAQALEYCTSKGRALYHDLNAYRVLFDDDANPRLSCFGLMKNSRDGKSYSTNLAFTP 220
Query: 153 PEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSND 212
PEY+RTGRVTPESV+YSFGT+LLDLLSGKHIPPSHALDLIR +N +LMDS LEG FS+D
Sbjct: 221 PEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQMLMDSGLEGQFSSD 280
Query: 213 EGTELVRLASRCLQSEARERPNAKSLVISLMSLQKEAEQVPSYVLLGIQHETAPSTKPLS 272
+GTEL+RLASRCLQ E RERPN KSLV +++ LQK+ E + S+ LLG+ + S +
Sbjct: 281 DGTELIRLASRCLQYEPRERPNPKSLVSAMIPLQKDLE-IASHQLLGVPN----SATTTA 335
Query: 273 LTPLGEACSRLDLTAIHEILEGMGYKDDEGIANELSFQMWTSQMQETLNSKKHGDTAFRA 332
L+PLGEAC R DLTAIHEI+E +GYKDDEG ELSFQMWT QMQ+TL KK GD+AFR
Sbjct: 336 LSPLGEACLRSDLTAIHEIIEKLGYKDDEGATTELSFQMWTDQMQDTLVFKKKGDSAFRH 395
Query: 333 KDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALY 392
KDF+ AI+CY+QFI+ GTM SPTV+AR+ L YLMNDMP+EAL +AMQAQV+SP W A Y
Sbjct: 396 KDFAKAIECYSQFIEVGTMGSPTVHARQSLCYLMNDMPREALNNAMQAQVISPAWHIASY 455
Query: 393 LQAACLFSLGMENDARETLKDGTNLEAKKN 422
LQA L +LG EN+A LKDG LE+K+N
Sbjct: 456 LQAVALSALGQENEAHTALKDGAMLESKRN 485
|
Arabidopsis thaliana (taxid: 3702) EC: 2EC: .EC: 7EC: .EC: 1EC: 1EC: .EC: 1 |
| >sp|Q944A7|Y4523_ARATH Probable serine/threonine-protein kinase At4g35230 OS=Arabidopsis thaliana GN=At4g35230 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 551 bits (1421), Expect = e-156, Method: Compositional matrix adjust.
Identities = 266/391 (68%), Positives = 311/391 (79%), Gaps = 3/391 (0%)
Query: 34 EEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQPMKWAMRLRVA 93
EEA VG LR RLANLIG C + DERLLVAEFMPN+TLAKHLFHWE Q ++WAMRLRV
Sbjct: 119 EEAWGVGKLRHNRLANLIGYCCDGDERLLVAEFMPNDTLAKHLFHWENQTIEWAMRLRVG 178
Query: 94 LYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLAFTPP 153
Y+A+AL+YCS++GR LYHDLNAYR+LFD+DG+PRLS FGLMKNSRDGKSYSTNLA+TPP
Sbjct: 179 YYIAEALDYCSTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSRDGKSYSTNLAYTPP 238
Query: 154 EYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDE 213
EY+R GRVTPESV YSFGT+LLDLLSGKHIPPSHALD+IR KN +LLMDS LEG FS +E
Sbjct: 239 EYLRNGRVTPESVTYSFGTVLLDLLSGKHIPPSHALDMIRGKNIILLMDSHLEGKFSTEE 298
Query: 214 GTELVRLASRCLQSEARERPNAKSLVISLMSLQKEAEQVPSYVLLGI-QHETAPSTKPLS 272
T +V LAS+CLQ E RERPN K LV +L LQ +++ VPSYV+LGI + E APST
Sbjct: 299 ATVVVELASQCLQYEPRERPNTKDLVATLAPLQTKSD-VPSYVMLGIKKQEEAPSTPQRP 357
Query: 273 LTPLGEACSRLDLTAIHEILEGMGYKDDEGIANELSFQMWTSQMQETLNSKKHGDTAFRA 332
L+PLGEACSR+DLTAIH+IL Y+DDEG NELSFQ WT QM++ L+++K GD +FR
Sbjct: 358 LSPLGEACSRMDLTAIHQILVMTHYRDDEG-TNELSFQEWTQQMKDMLDARKRGDQSFRE 416
Query: 333 KDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALY 392
KDF TAIDCY+QFID GTMVSPTV+ RR L YL+ D P AL DAMQAQ V PDWPTA Y
Sbjct: 417 KDFKTAIDCYSQFIDVGTMVSPTVFGRRSLCYLLCDQPDAALRDAMQAQCVYPDWPTAFY 476
Query: 393 LQAACLFSLGMENDARETLKDGTNLEAKKNK 423
+Q+ L L M DA + L + LE K+ +
Sbjct: 477 MQSVALAKLNMNTDAADMLNEAAQLEEKRQR 507
|
Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|Q7XJT7|SSP_ARATH Probable inactive receptor-like kinase SSP OS=Arabidopsis thaliana GN=SSP PE=1 SV=1 | Back alignment and function description |
|---|
Score = 378 bits (971), Expect = e-104, Method: Compositional matrix adjust.
Identities = 191/391 (48%), Positives = 265/391 (67%), Gaps = 15/391 (3%)
Query: 31 LNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQPMKWAMRL 90
L LEEA+ VG LR +RL NLIG C + D+R LVA+FM N+TLAK LF + Q M W++RL
Sbjct: 90 LFLEEAQRVGKLRHKRLVNLIGYCCDGDKRFLVADFMANDTLAKRLFQRKYQTMDWSIRL 149
Query: 91 RVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLAF 150
RVA ++A+AL+YC++ G A Y++L+AY++LFD+DG+ LS FGLMK + +
Sbjct: 150 RVAYFVAEALDYCNTAGFASYNNLSAYKVLFDEDGDACLSCFGLMKEINNDQ-------- 201
Query: 151 TPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFS 210
+ TG V PE+V+Y FGT+L++LLSGK IPPSHA ++I KN LMD L+G FS
Sbjct: 202 -----ITTGSVNPENVIYRFGTVLVNLLSGKQIPPSHAPEMIHRKNVFKLMDPYLKGKFS 256
Query: 211 NDEGTELVRLASRCLQSEARERPNAKSLVISLMSLQKEAEQVPSYVLLGIQHETAPSTKP 270
DE + +LAS+CL+ E +E PN K +V +L +LQ E PSY ++ + ++ ++
Sbjct: 257 IDEANVVYKLASQCLKYEGQESPNTKEIVATLETLQTRTE-APSYEVVEMTNQEKDASSS 315
Query: 271 LSLTPLGEACSRLDLTAIHEILEGMGYKDDEGIANELSFQMWTSQMQETLNSKKHGDTAF 330
+L+PLGEAC R+DL +IH IL GY DD+ I ELSF+ W +++E + +++GD AF
Sbjct: 316 SNLSPLGEACLRMDLASIHSILVLAGYDDDKDII-ELSFEEWIQEVKELQDVRRNGDRAF 374
Query: 331 RAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTA 390
+DF TAI CY+QF++ ++V P+VYARR LSYL D P++AL D M AQ V PDWPTA
Sbjct: 375 VEQDFKTAIACYSQFVEERSLVYPSVYARRSLSYLFCDEPEKALLDGMHAQGVFPDWPTA 434
Query: 391 LYLQAACLFSLGMENDARETLKDGTNLEAKK 421
YLQ+ L L M D+ +TLK+ LE KK
Sbjct: 435 FYLQSVALAKLDMNTDSADTLKEAALLEVKK 465
|
Probable inactive protein kinase that activates the YODA MAP kinase cascade, regulating the asymmetric first division, and thus embryo polarity. Acts as an adapter at the plasma membrane, possibly recruiting an activator. Arabidopsis thaliana (taxid: 3702) |
| >sp|Q9LFP7|Y5158_ARATH Probable receptor-like protein kinase At5g15080 OS=Arabidopsis thaliana GN=At5g15080 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 136 bits (342), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 87/233 (37%), Positives = 129/233 (55%), Gaps = 21/233 (9%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQPMKWAMRLRV 92
L E +GNL L L+G C E D+RLLV EFMP +L HLF + P+ W++R+++
Sbjct: 194 LAEINFLGNLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFR-RSLPLPWSIRMKI 252
Query: 93 ALYLAQALEYCSSKG--RALYHDLNAYRILFDKDGNPRLSSFGLMKNSRD-GKSY-STNL 148
AL A+ L + + +Y D IL D D N +LS FGL K++ D GK++ ST +
Sbjct: 253 ALGAAKGLSFLHEEALKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPDEGKTHVSTRV 312
Query: 149 ----AFTPPEYMRTGRVTPESVVYSFGTMLLDLLSG-----KHIPPS-HAL------DLI 192
+ PEY+ TG +T +S VYSFG +LL++L+G K+ P H L L+
Sbjct: 313 MGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLL 372
Query: 193 RSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERPNAKSLVISLMSL 245
+ F L+D LEGHFS ++ +LA++CL + + RP +V +L L
Sbjct: 373 DKRRFYRLLDPRLEGHFSIKGAQKVTQLAAQCLSRDPKIRPKMSDVVEALKPL 425
|
Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|Q9SRH7|Y3130_ARATH Receptor-like serine/threonine-protein kinase At3g01300 OS=Arabidopsis thaliana GN=At3g01300 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 135 bits (340), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 84/233 (36%), Positives = 127/233 (54%), Gaps = 21/233 (9%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQPMKWAMRLRV 92
L E +GNL L L+G C E D+RLLV EFMP +L HLF + P+ W++R+++
Sbjct: 188 LAEINYLGNLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFR-RSLPLPWSIRMKI 246
Query: 93 ALYLAQALEYCSSKG--RALYHDLNAYRILFDKDGNPRLSSFGLMKNSRD-GKSYST--- 146
AL A+ L + + +Y D IL D + N +LS FGL K++ D GK++ +
Sbjct: 247 ALGAAKGLSFLHEEALKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDAPDEGKTHVSTRV 306
Query: 147 --NLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSG-----KHIPPS-HAL------DLI 192
+ PEY+ TG +T +S VYSFG +LL++L+G K+ P H L L+
Sbjct: 307 MGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLL 366
Query: 193 RSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERPNAKSLVISLMSL 245
+ F L+D LEGHFS ++ +LA++CL +++ RP +V L L
Sbjct: 367 DKRRFYRLLDPRLEGHFSVKGAQKVTQLAAQCLSRDSKIRPKMSEVVEVLKPL 419
|
Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|Q06548|APK1A_ARATH Protein kinase APK1A, chloroplastic OS=Arabidopsis thaliana GN=APK1A PE=2 SV=1 | Back alignment and function description |
|---|
Score = 134 bits (338), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 89/235 (37%), Positives = 129/235 (54%), Gaps = 21/235 (8%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFH--WETQPMKWAMRL 90
L E +G L LIG C E + RLLV EFMP +L HLF QP+ W +RL
Sbjct: 120 LAEVNYLGQFSHRHLVKLIGYCLEDEHRLLVYEFMPRGSLENHLFRRGLYFQPLSWKLRL 179
Query: 91 RVALYLAQALEYC-SSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG-KSY-STN 147
+VAL A+ L + SS+ R +Y D IL D + N +LS FGL K+ G KS+ ST
Sbjct: 180 KVALGAAKGLAFLHSSETRVIYRDFKTSNILLDSEYNAKLSDFGLAKDGPIGDKSHVSTR 239
Query: 148 L----AFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIP----PSHALDLIR-SKNFL 198
+ + PEY+ TG +T +S VYSFG +LL+LLSG+ PS +L+ +K +L
Sbjct: 240 VMGTHGYAAPEYLATGHLTTKSDVYSFGVVLLELLSGRRAVDKNRPSGERNLVEWAKPYL 299
Query: 199 L-------LMDSALEGHFSNDEGTELVRLASRCLQSEARERPNAKSLVISLMSLQ 246
+ ++D+ L+ +S +E ++ L+ RCL +E + RPN +V L +Q
Sbjct: 300 VNKRKIFRVIDNRLQDQYSMEEACKVATLSLRCLTTEIKLRPNMSEVVSHLEHIQ 354
|
Possible bi-functional kinase. In vitro, it exhibits serine/threonine activity. In vivo, can phosphorylate tyrosine residues of limited substrates. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|O49839|APK2A_ARATH Protein kinase 2A, chloroplastic OS=Arabidopsis thaliana GN=APK2A PE=2 SV=1 | Back alignment and function description |
|---|
Score = 134 bits (336), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 83/242 (34%), Positives = 122/242 (50%), Gaps = 29/242 (11%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQPMKWAMRLRV 92
L E +G L L L+G C E + RLLV EFMP +L HLF QP+ WA+R++V
Sbjct: 138 LTEVNYLGQLSHPNLVLLVGYCAEGENRLLVYEFMPKGSLENHLFRRGAQPLTWAIRMKV 197
Query: 93 ALYLAQALEYC-SSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKN--SRDGKSYSTNL- 148
A+ A+ L + +K + +Y D A IL D D N +LS FGL K + D ST +
Sbjct: 198 AVGAAKGLTFLHEAKSQVIYRDFKAANILLDADFNAKLSDFGLAKAGPTGDNTHVSTKVI 257
Query: 149 ---AFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALD--------------- 190
+ PEY+ TGR+T +S VYSFG +LL+L+SG+ A+D
Sbjct: 258 GTHGYAAPEYVATGRLTAKSDVYSFGVVLLELISGR-----RAMDNSNGGNEYSLVDWAT 312
Query: 191 --LIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERPNAKSLVISLMSLQKE 248
L + +MD+ L G + LA +CL +A+ RP ++++L L+
Sbjct: 313 PYLGDKRKLFRIMDTKLGGQYPQKGAFTAANLALQCLNPDAKLRPKMSEVLVTLEQLESV 372
Query: 249 AE 250
A+
Sbjct: 373 AK 374
|
Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|O49840|APK2B_ARATH Protein kinase 2B, chloroplastic OS=Arabidopsis thaliana GN=APK2B PE=1 SV=1 | Back alignment and function description |
|---|
Score = 133 bits (334), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 80/233 (34%), Positives = 117/233 (50%), Gaps = 19/233 (8%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQPMKWAMRLRV 92
L E +G L L L+G C E + RLLV EFMP +L HLF QP+ WA+R++V
Sbjct: 135 LTEVNYLGQLSHPNLVKLVGYCVEGENRLLVYEFMPKGSLENHLFRRGAQPLTWAIRMKV 194
Query: 93 ALYLAQALEYC-SSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKS--YSTNL- 148
A+ A+ L + +K + +Y D A IL D + N +LS FGL K G ST +
Sbjct: 195 AIGAAKGLTFLHDAKSQVIYRDFKAANILLDAEFNSKLSDFGLAKAGPTGDKTHVSTQVM 254
Query: 149 ---AFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRS----------- 194
+ PEY+ TGR+T +S VYSFG +LL+LLSG+ + + +S
Sbjct: 255 GTHGYAAPEYVATGRLTAKSDVYSFGVVLLELLSGRRAVDKSKVGMEQSLVDWATPYLGD 314
Query: 195 -KNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERPNAKSLVISLMSLQ 246
+ +MD+ L G + LA +CL +A+ RP ++ L L+
Sbjct: 315 KRKLFRIMDTRLGGQYPQKGAYTAASLALQCLNPDAKLRPKMSEVLAKLDQLE 367
|
Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|P46573|APK1B_ARATH Protein kinase APK1B, chloroplastic OS=Arabidopsis thaliana GN=APK1B PE=2 SV=2 | Back alignment and function description |
|---|
Score = 129 bits (324), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 87/235 (37%), Positives = 127/235 (54%), Gaps = 21/235 (8%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWET--QPMKWAMRL 90
L E +G L LIG C E + RLLV EFMP +L HLF + QP+ W +RL
Sbjct: 121 LAEVNYLGQFSHPNLVKLIGYCLEDEHRLLVYEFMPRGSLENHLFRRGSYFQPLSWTLRL 180
Query: 91 RVALYLAQALEYC-SSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG-KSY-STN 147
+VAL A+ L + +++ +Y D IL D + N +LS FGL K+ G KS+ ST
Sbjct: 181 KVALGAAKGLAFLHNAETSVIYRDFKTSNILLDSEYNAKLSDFGLAKDGPTGDKSHVSTR 240
Query: 148 L----AFTPPEYMRTGRVTPESVVYSFGTMLLDLLSG-----KHIPPSH------ALDLI 192
+ + PEY+ TG +T +S VYS+G +LL++LSG K+ PP A L+
Sbjct: 241 IMGTYGYAAPEYLATGHLTTKSDVYSYGVVLLEVLSGRRAVDKNRPPGEQKLVEWARPLL 300
Query: 193 RSKNFLL-LMDSALEGHFSNDEGTELVRLASRCLQSEARERPNAKSLVISLMSLQ 246
+K L ++D+ L+ +S +E ++ LA RCL E + RPN +V L +Q
Sbjct: 301 ANKRKLFRVIDNRLQDQYSMEEACKVATLALRCLTFEIKLRPNMNEVVSHLEHIQ 355
|
Possible bi-functional kinase. In vitro, it exhibits serine/threonine activity. In vivo, can phosphorylate tyrosine residues of limited substrates. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|Q8H186|Y3545_ARATH Probable receptor-like protein kinase At3g55450 OS=Arabidopsis thaliana GN=At3g55450 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 127 bits (320), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 80/236 (33%), Positives = 122/236 (51%), Gaps = 22/236 (9%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLF---HWETQPMKWAMR 89
L E +G L L LIG C E ++RLLV EFM +L HLF + + +P+ W +R
Sbjct: 113 LTEINYLGQLSHPNLVKLIGYCLEDEQRLLVYEFMHKGSLENHLFANGNKDFKPLSWILR 172
Query: 90 LRVALYLAQALEYCSSKG-RALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG-KSYST- 146
++VAL A+ L + S + +Y D+ A IL D D N +LS FGL ++ G +SY +
Sbjct: 173 IKVALDAAKGLAFLHSDPVKVIYRDIKASNILLDSDFNAKLSDFGLARDGPMGEQSYVST 232
Query: 147 ----NLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGK----HIPPSHALDLI------ 192
+ PEY+ TG + S VYSFG +LL+LL G+ H P+ +L+
Sbjct: 233 RVMGTFGYAAPEYVSTGHLNARSDVYSFGVVLLELLCGRQALDHNRPAKEQNLVDWARPY 292
Query: 193 --RSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERPNAKSLVISLMSLQ 246
+ LL++D+ L + + L +A +CL E + RP +V +L+ LQ
Sbjct: 293 LTSRRKVLLIVDTRLNSQYKPEGAVRLASIAVQCLSFEPKSRPTMDQVVRALVQLQ 348
|
Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 424 | ||||||
| 224087605 | 491 | predicted protein [Populus trichocarpa] | 0.922 | 0.796 | 0.895 | 0.0 | |
| 224138934 | 491 | predicted protein [Populus trichocarpa] | 0.922 | 0.796 | 0.897 | 0.0 | |
| 225440554 | 491 | PREDICTED: probable serine/threonine-pro | 0.922 | 0.796 | 0.885 | 0.0 | |
| 356504321 | 491 | PREDICTED: probable serine/threonine-pro | 0.922 | 0.796 | 0.887 | 0.0 | |
| 255573947 | 491 | receptor protein kinase, putative [Ricin | 0.922 | 0.796 | 0.885 | 0.0 | |
| 449506466 | 491 | PREDICTED: probable serine/threonine-pro | 0.922 | 0.796 | 0.867 | 0.0 | |
| 449460335 | 491 | PREDICTED: probable serine/threonine-pro | 0.922 | 0.796 | 0.864 | 0.0 | |
| 297745973 | 490 | unnamed protein product [Vitis vinifera] | 0.919 | 0.795 | 0.861 | 0.0 | |
| 359478579 | 512 | PREDICTED: probable serine/threonine-pro | 0.919 | 0.761 | 0.861 | 0.0 | |
| 356496122 | 490 | PREDICTED: LOW QUALITY PROTEIN: probable | 0.917 | 0.793 | 0.851 | 0.0 |
| >gi|224087605|ref|XP_002308195.1| predicted protein [Populus trichocarpa] gi|222854171|gb|EEE91718.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 733 bits (1892), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 351/392 (89%), Positives = 372/392 (94%), Gaps = 1/392 (0%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQPMKWAMRLRV 92
LEEA+ VG+LRSERLANLIGCC E +ERLLVAEFMP+ETLAKHLFHWE+QPMKWAMRLRV
Sbjct: 101 LEEARTVGSLRSERLANLIGCCCEGEERLLVAEFMPHETLAKHLFHWESQPMKWAMRLRV 160
Query: 93 ALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLAFTP 152
ALYLAQALEYC SKGRALYHDLNAYRILFDKDGNPRLS FGLMKNSRDGKSYSTNLAFTP
Sbjct: 161 ALYLAQALEYCCSKGRALYHDLNAYRILFDKDGNPRLSCFGLMKNSRDGKSYSTNLAFTP 220
Query: 153 PEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSND 212
PEY+RTGRVTPESVVYSFGT+LLDLLSGKHIPPSHALDLIR KNFL+LMDSALEGHFS D
Sbjct: 221 PEYLRTGRVTPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSALEGHFSKD 280
Query: 213 EGTELVRLASRCLQSEARERPNAKSLVISLMSLQKEAEQVPSYVLLGIQHETAPSTKPLS 272
+GTELVRLASRCLQ EARERPNAKSLV +L+SLQKE E VPSYVL+GI+ ETA ST+PLS
Sbjct: 281 DGTELVRLASRCLQYEARERPNAKSLVTALLSLQKETE-VPSYVLMGIRQETASSTQPLS 339
Query: 273 LTPLGEACSRLDLTAIHEILEGMGYKDDEGIANELSFQMWTSQMQETLNSKKHGDTAFRA 332
LTP GEAC R DLTAIHEILE +GYKDDEGIANELSFQMWT+QMQETLNSKKHGDTAFRA
Sbjct: 340 LTPFGEACLRTDLTAIHEILEKIGYKDDEGIANELSFQMWTNQMQETLNSKKHGDTAFRA 399
Query: 333 KDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALY 392
KDF+TAIDCYTQFIDGGTMVSPTVYARRCLSYLM+DMPQEALGDAMQAQVVSP+W TA Y
Sbjct: 400 KDFATAIDCYTQFIDGGTMVSPTVYARRCLSYLMSDMPQEALGDAMQAQVVSPEWSTASY 459
Query: 393 LQAACLFSLGMENDARETLKDGTNLEAKKNKN 424
LQAACLFSLGME DA+ETLKDGTNLEAK+NKN
Sbjct: 460 LQAACLFSLGMETDAQETLKDGTNLEAKRNKN 491
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224138934|ref|XP_002322938.1| predicted protein [Populus trichocarpa] gi|222867568|gb|EEF04699.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 733 bits (1891), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 352/392 (89%), Positives = 372/392 (94%), Gaps = 1/392 (0%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQPMKWAMRLRV 92
LEEA+ VG+LRSERLANLIGCC EA+ERLLVAEFMP+ETLAKHLFHWE+QPMKWAMRLRV
Sbjct: 101 LEEARTVGSLRSERLANLIGCCCEAEERLLVAEFMPHETLAKHLFHWESQPMKWAMRLRV 160
Query: 93 ALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLAFTP 152
ALYLAQALEYC SKGRALYHDLNAYRILFDKDGNPRLS FGLMKNSRDGKSYSTNLAFTP
Sbjct: 161 ALYLAQALEYCGSKGRALYHDLNAYRILFDKDGNPRLSCFGLMKNSRDGKSYSTNLAFTP 220
Query: 153 PEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSND 212
PEY+RTGRVTPESVVYSFGT+LLDLLSGKHIPPSHALDLIR KNFL+LMDSALEGHFS D
Sbjct: 221 PEYLRTGRVTPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSALEGHFSKD 280
Query: 213 EGTELVRLASRCLQSEARERPNAKSLVISLMSLQKEAEQVPSYVLLGIQHETAPSTKPLS 272
+GTELVRLASRCLQ EARERPNAKSLV +LMSLQKE E VPSYVL+GI+ ETA ST PLS
Sbjct: 281 DGTELVRLASRCLQYEARERPNAKSLVTALMSLQKETE-VPSYVLMGIREETASSTLPLS 339
Query: 273 LTPLGEACSRLDLTAIHEILEGMGYKDDEGIANELSFQMWTSQMQETLNSKKHGDTAFRA 332
LTP GEAC R+DLTAIHEILE +GYKDDEGIANELSFQMWT+QMQETLNSKKHGD AFRA
Sbjct: 340 LTPFGEACLRMDLTAIHEILEKIGYKDDEGIANELSFQMWTNQMQETLNSKKHGDAAFRA 399
Query: 333 KDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALY 392
KDF+TAIDCYTQFIDGGTMVSPTVYARRCLSYLM+DMPQEALGDAMQAQVVSPDW TA Y
Sbjct: 400 KDFATAIDCYTQFIDGGTMVSPTVYARRCLSYLMSDMPQEALGDAMQAQVVSPDWSTASY 459
Query: 393 LQAACLFSLGMENDARETLKDGTNLEAKKNKN 424
LQAACLFSLGME DA+ETLKDGT+LEAK+NKN
Sbjct: 460 LQAACLFSLGMETDAQETLKDGTHLEAKRNKN 491
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225440554|ref|XP_002276280.1| PREDICTED: probable serine/threonine-protein kinase At5g41260 [Vitis vinifera] gi|297740276|emb|CBI30458.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 731 bits (1886), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 347/392 (88%), Positives = 371/392 (94%), Gaps = 1/392 (0%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQPMKWAMRLRV 92
+EEA++VGNLR+ERLANLIGCC E DERLLVAEFMPNETLAKHLFHWETQPMKWAMRLRV
Sbjct: 101 VEEARSVGNLRNERLANLIGCCCEGDERLLVAEFMPNETLAKHLFHWETQPMKWAMRLRV 160
Query: 93 ALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLAFTP 152
ALYLAQALEYCSSKGRALYHDLNAYR+LFD+DGNPRLS FGLMKNSRDGKSYSTNLAFTP
Sbjct: 161 ALYLAQALEYCSSKGRALYHDLNAYRVLFDQDGNPRLSCFGLMKNSRDGKSYSTNLAFTP 220
Query: 153 PEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSND 212
PEY+RTGRVTPESVVYSFGT+LLDLLSGKHIPPSHALDLIR KNFL+LMDS LEGHFSND
Sbjct: 221 PEYLRTGRVTPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSND 280
Query: 213 EGTELVRLASRCLQSEARERPNAKSLVISLMSLQKEAEQVPSYVLLGIQHETAPSTKPLS 272
+GTELVRLASRCLQ EARERPNAKSLV +LMSLQKE E VPSY+L+GI H+TA +PLS
Sbjct: 281 DGTELVRLASRCLQYEARERPNAKSLVTALMSLQKETE-VPSYILMGIAHDTASPAEPLS 339
Query: 273 LTPLGEACSRLDLTAIHEILEGMGYKDDEGIANELSFQMWTSQMQETLNSKKHGDTAFRA 332
LTP GEAC R+DLTAIHEIL+ +GYKDDEGIANELSFQMWT+QMQETLNSKKHGDTAFRA
Sbjct: 340 LTPFGEACLRMDLTAIHEILDKIGYKDDEGIANELSFQMWTNQMQETLNSKKHGDTAFRA 399
Query: 333 KDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALY 392
KDF+TAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSP+W TA Y
Sbjct: 400 KDFTTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPEWATAFY 459
Query: 393 LQAACLFSLGMENDARETLKDGTNLEAKKNKN 424
LQAA LFSLGM+ DA+ETLKDGTNLE KK+KN
Sbjct: 460 LQAAALFSLGMDTDAQETLKDGTNLEVKKSKN 491
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356504321|ref|XP_003520945.1| PREDICTED: probable serine/threonine-protein kinase At5g41260-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 728 bits (1878), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 348/392 (88%), Positives = 367/392 (93%), Gaps = 1/392 (0%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQPMKWAMRLRV 92
LEEAK VG+LRSERLANL+G CYE +ERLLVAEFMP+ETLAKHLFHWE QPMKWAMRLRV
Sbjct: 101 LEEAKQVGSLRSERLANLVGYCYEGEERLLVAEFMPHETLAKHLFHWEAQPMKWAMRLRV 160
Query: 93 ALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLAFTP 152
A YLAQALEYC+SKGR LYHDLNAYRILFD+D NPRLS FGLMKNSRDGKSYSTNLAFTP
Sbjct: 161 AFYLAQALEYCTSKGRGLYHDLNAYRILFDQDANPRLSCFGLMKNSRDGKSYSTNLAFTP 220
Query: 153 PEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSND 212
PEY+RTGRVTPESVVYSFGT+LLDLLSGKHIPPSHALDLIR KNFL+LMDSALEGHFS D
Sbjct: 221 PEYLRTGRVTPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSALEGHFSKD 280
Query: 213 EGTELVRLASRCLQSEARERPNAKSLVISLMSLQKEAEQVPSYVLLGIQHETAPSTKPLS 272
+GTELVRLASRCLQ EARERPNAKSLV SL+SLQKE E VPSYVL+G+Q ETA S K LS
Sbjct: 281 DGTELVRLASRCLQYEARERPNAKSLVASLLSLQKETE-VPSYVLMGLQQETASSAKQLS 339
Query: 273 LTPLGEACSRLDLTAIHEILEGMGYKDDEGIANELSFQMWTSQMQETLNSKKHGDTAFRA 332
LTP GEAC RLDLTAIHEILE GYKDDEGIANELSFQ+WTSQMQETLN KKHGDTAFRA
Sbjct: 340 LTPFGEACLRLDLTAIHEILEKTGYKDDEGIANELSFQLWTSQMQETLNLKKHGDTAFRA 399
Query: 333 KDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALY 392
KDF TAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDM QEALGDAMQAQVVSP+WPT+LY
Sbjct: 400 KDFVTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMAQEALGDAMQAQVVSPEWPTSLY 459
Query: 393 LQAACLFSLGMENDARETLKDGTNLEAKKNKN 424
LQAACLFSLGMENDA+ETLKDGTN+EA+KNKN
Sbjct: 460 LQAACLFSLGMENDAQETLKDGTNMEARKNKN 491
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255573947|ref|XP_002527892.1| receptor protein kinase, putative [Ricinus communis] gi|223532743|gb|EEF34523.1| receptor protein kinase, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 722 bits (1864), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 347/392 (88%), Positives = 368/392 (93%), Gaps = 1/392 (0%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQPMKWAMRLRV 92
LEEA++VG+LRSERLANLIGCC E DERLLVAEFMP+ETLAKHLFHWE QPMKWAMRLRV
Sbjct: 101 LEEARSVGSLRSERLANLIGCCCEGDERLLVAEFMPHETLAKHLFHWENQPMKWAMRLRV 160
Query: 93 ALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLAFTP 152
ALYLAQALEYCSSKGRALYHDLNAYR+LFDKD +PRLS FGLMKNSRDGKSYSTNLAFTP
Sbjct: 161 ALYLAQALEYCSSKGRALYHDLNAYRVLFDKDADPRLSCFGLMKNSRDGKSYSTNLAFTP 220
Query: 153 PEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSND 212
PEY+RTGRVTPESVVYSFGT+LLDLLSGKHIPPSHALDLI+ KNF +LMDSALEG FS D
Sbjct: 221 PEYLRTGRVTPESVVYSFGTLLLDLLSGKHIPPSHALDLIKGKNFPMLMDSALEGRFSKD 280
Query: 213 EGTELVRLASRCLQSEARERPNAKSLVISLMSLQKEAEQVPSYVLLGIQHETAPSTKPLS 272
+GTELVRLASRCLQ EARERPNAKSLV SL+SLQKE E VPSYVL+ I HET ST+ LS
Sbjct: 281 DGTELVRLASRCLQYEARERPNAKSLVTSLLSLQKETE-VPSYVLMDIPHETGSSTQQLS 339
Query: 273 LTPLGEACSRLDLTAIHEILEGMGYKDDEGIANELSFQMWTSQMQETLNSKKHGDTAFRA 332
LTP GEAC R+DLTAIHEILE +GYKDDEGIANELSFQMWTSQMQETLNSKKHGDTAFRA
Sbjct: 340 LTPFGEACLRVDLTAIHEILEKLGYKDDEGIANELSFQMWTSQMQETLNSKKHGDTAFRA 399
Query: 333 KDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALY 392
KDF+TAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSP+WPTA Y
Sbjct: 400 KDFATAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPEWPTASY 459
Query: 393 LQAACLFSLGMENDARETLKDGTNLEAKKNKN 424
LQAACLFSLGME DA+ETLKDGT LEAK+NK+
Sbjct: 460 LQAACLFSLGMETDAQETLKDGTKLEAKRNKS 491
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449506466|ref|XP_004162757.1| PREDICTED: probable serine/threonine-protein kinase At5g41260-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 712 bits (1838), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 340/392 (86%), Positives = 364/392 (92%), Gaps = 1/392 (0%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQPMKWAMRLRV 92
L+EA++VGNLRSERLANLIGCC E +ERLLVAEFMPNETLAKHLFHWE+ PMKWAMRLRV
Sbjct: 101 LDEARSVGNLRSERLANLIGCCCEGEERLLVAEFMPNETLAKHLFHWESHPMKWAMRLRV 160
Query: 93 ALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLAFTP 152
ALYL+QALEYCS KGRALYHDLNAYRILFD+DGNPRLS FGLMKNSRDGKSYSTNLAFTP
Sbjct: 161 ALYLSQALEYCSGKGRALYHDLNAYRILFDQDGNPRLSCFGLMKNSRDGKSYSTNLAFTP 220
Query: 153 PEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSND 212
PEY+RTGRVTPESVVYS+GT+LLDLLSGKHIPPSHALDLIR KNFL+LMDSALEGHFSND
Sbjct: 221 PEYLRTGRVTPESVVYSYGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSALEGHFSND 280
Query: 213 EGTELVRLASRCLQSEARERPNAKSLVISLMSLQKEAEQVPSYVLLGIQHETAPSTKPLS 272
+GTELVRLASRCLQ EARERPNAKSLV +LM LQK+ E VPSYVL+GI E A ST+PLS
Sbjct: 281 DGTELVRLASRCLQYEARERPNAKSLVTALMPLQKDTE-VPSYVLMGITPENATSTQPLS 339
Query: 273 LTPLGEACSRLDLTAIHEILEGMGYKDDEGIANELSFQMWTSQMQETLNSKKHGDTAFRA 332
LTP GEAC R DLTAIHE+L+ GYKDDEGIANELSFQMWTSQMQETLNSKKHGDTAFRA
Sbjct: 340 LTPFGEACLRKDLTAIHEMLDKNGYKDDEGIANELSFQMWTSQMQETLNSKKHGDTAFRA 399
Query: 333 KDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALY 392
+DF+TAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDM QEALGDAMQAQ +SP+W TA Y
Sbjct: 400 RDFATAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMGQEALGDAMQAQAISPEWATAFY 459
Query: 393 LQAACLFSLGMENDARETLKDGTNLEAKKNKN 424
LQA CLFSLGMENDA+E LK+GT EAKKNKN
Sbjct: 460 LQATCLFSLGMENDAQEALKEGTKFEAKKNKN 491
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449460335|ref|XP_004147901.1| PREDICTED: probable serine/threonine-protein kinase At5g41260-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 709 bits (1829), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 339/392 (86%), Positives = 363/392 (92%), Gaps = 1/392 (0%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQPMKWAMRLRV 92
L+EA++VGNLRSERLANLIGCC E +ERLLVAEFMPNETLAKHLFHWE+ PMKWAMRLRV
Sbjct: 101 LDEARSVGNLRSERLANLIGCCCEGEERLLVAEFMPNETLAKHLFHWESHPMKWAMRLRV 160
Query: 93 ALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLAFTP 152
ALYL+QALEYCS KGRALYHDLNAYRILFD+DGNPRLS FGLMKNSRDGKSYSTNLAFTP
Sbjct: 161 ALYLSQALEYCSGKGRALYHDLNAYRILFDQDGNPRLSCFGLMKNSRDGKSYSTNLAFTP 220
Query: 153 PEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSND 212
PEY+RTGRVTPESVVYS+GT+LLDLLSGKHIPPSHALDLIR KNFL+LMDSALEGHFSND
Sbjct: 221 PEYLRTGRVTPESVVYSYGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSALEGHFSND 280
Query: 213 EGTELVRLASRCLQSEARERPNAKSLVISLMSLQKEAEQVPSYVLLGIQHETAPSTKPLS 272
+GTELVRLASRCLQ EARERPNAKSLV +LM LQK+ E V SYVL+GI E A ST+PLS
Sbjct: 281 DGTELVRLASRCLQYEARERPNAKSLVTALMPLQKDTE-VLSYVLMGITPENATSTQPLS 339
Query: 273 LTPLGEACSRLDLTAIHEILEGMGYKDDEGIANELSFQMWTSQMQETLNSKKHGDTAFRA 332
LTP GEAC R DLTAIHE+L+ GYKDDEGIANELSFQMWTSQMQETLNSKKHGDTAFRA
Sbjct: 340 LTPFGEACLRKDLTAIHEMLDKNGYKDDEGIANELSFQMWTSQMQETLNSKKHGDTAFRA 399
Query: 333 KDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALY 392
+DF+TAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDM QEALGDAMQAQ +SP+W TA Y
Sbjct: 400 RDFATAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMGQEALGDAMQAQAISPEWATAFY 459
Query: 393 LQAACLFSLGMENDARETLKDGTNLEAKKNKN 424
LQA CLFSLGMENDA+E LK+GT EAKKNKN
Sbjct: 460 LQATCLFSLGMENDAQEALKEGTKFEAKKNKN 491
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297745973|emb|CBI16029.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 707 bits (1824), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 337/391 (86%), Positives = 362/391 (92%), Gaps = 1/391 (0%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQPMKWAMRLRV 92
LEEA+AVG LR+ERLANLIGCC E +ERLLVAEFMPNETL+KHLFHWE QPMKWAMRLRV
Sbjct: 100 LEEARAVGQLRNERLANLIGCCCEGEERLLVAEFMPNETLSKHLFHWEAQPMKWAMRLRV 159
Query: 93 ALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLAFTP 152
ALYLAQALEYCSSKGRALYHDLNAYR+LFD+DGNPRLS FGLMKNSRDGKSYSTNLAFTP
Sbjct: 160 ALYLAQALEYCSSKGRALYHDLNAYRVLFDQDGNPRLSCFGLMKNSRDGKSYSTNLAFTP 219
Query: 153 PEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSND 212
PEY+RTGRVT ESVVYSFGT+LLDLLSGKHIPPSHALDLIR KNFL+LMDS LEGHFSND
Sbjct: 220 PEYLRTGRVTAESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSND 279
Query: 213 EGTELVRLASRCLQSEARERPNAKSLVISLMSLQKEAEQVPSYVLLGIQHETAPSTKPLS 272
+GTELVRLASRCLQ E RERPNA+SLV SL LQKE E VPSYVL+GIQ ET + L
Sbjct: 280 DGTELVRLASRCLQYEPRERPNARSLVTSLTPLQKETE-VPSYVLMGIQQETVSPAETLP 338
Query: 273 LTPLGEACSRLDLTAIHEILEGMGYKDDEGIANELSFQMWTSQMQETLNSKKHGDTAFRA 332
LTPLGEACSR+DLTAIHEILE +GYKDDEG+ANELSFQMWT+Q+QETLNSKK GDTAFRA
Sbjct: 339 LTPLGEACSRMDLTAIHEILEKVGYKDDEGVANELSFQMWTNQIQETLNSKKRGDTAFRA 398
Query: 333 KDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALY 392
KDF+TAI+CYTQFIDGGTMVSPTV+ARRCL YLMN+MPQEALGDAMQAQVVSPDW TA Y
Sbjct: 399 KDFTTAIECYTQFIDGGTMVSPTVFARRCLCYLMNEMPQEALGDAMQAQVVSPDWSTAFY 458
Query: 393 LQAACLFSLGMENDARETLKDGTNLEAKKNK 423
LQAA LFSLGM+NDARETLKDGT LEAK+N+
Sbjct: 459 LQAAALFSLGMDNDARETLKDGTTLEAKRNR 489
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|359478579|ref|XP_002280021.2| PREDICTED: probable serine/threonine-protein kinase At5g41260-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 705 bits (1819), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 337/391 (86%), Positives = 360/391 (92%), Gaps = 1/391 (0%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQPMKWAMRLRV 92
LEEA+AVG LR+ERLANLIGCC E +ERLLVAEFMPNETL+KHLFHWE QPMKWAMRLRV
Sbjct: 100 LEEARAVGQLRNERLANLIGCCCEGEERLLVAEFMPNETLSKHLFHWEAQPMKWAMRLRV 159
Query: 93 ALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLAFTP 152
ALYLAQALEYCSSKGRALYHDLNAYR+LFD+DGNPRLS FGLMKNSRDGKSYSTNLAFTP
Sbjct: 160 ALYLAQALEYCSSKGRALYHDLNAYRVLFDQDGNPRLSCFGLMKNSRDGKSYSTNLAFTP 219
Query: 153 PEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSND 212
PEY+RTGRVT ESVVYSFGT+LLDLLSGKHIPPSHALDLIR KNFL+LMDS LEGHFSND
Sbjct: 220 PEYLRTGRVTAESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSND 279
Query: 213 EGTELVRLASRCLQSEARERPNAKSLVISLMSLQKEAEQVPSYVLLGIQHETAPSTKPLS 272
+GTELVRLASRCLQ E RERPNA+SLV SL LQKE E VPSYVL+GIQ ET + L
Sbjct: 280 DGTELVRLASRCLQYEPRERPNARSLVTSLTPLQKETE-VPSYVLMGIQQETVSPAETLP 338
Query: 273 LTPLGEACSRLDLTAIHEILEGMGYKDDEGIANELSFQMWTSQMQETLNSKKHGDTAFRA 332
LTPLGEACSR+DLTAIHEILE +GYKDDEG+ANELSFQMWT+Q+QETLNSKK GDTAFRA
Sbjct: 339 LTPLGEACSRMDLTAIHEILEKVGYKDDEGVANELSFQMWTNQIQETLNSKKRGDTAFRA 398
Query: 333 KDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALY 392
KDF+TAI+CYTQFIDGGTMVSPTV+ARRCL YLMN+MPQEALGDAMQAQVVSPDW TA Y
Sbjct: 399 KDFTTAIECYTQFIDGGTMVSPTVFARRCLCYLMNEMPQEALGDAMQAQVVSPDWSTAFY 458
Query: 393 LQAACLFSLGMENDARETLKDGTNLEAKKNK 423
LQAA LFSLGM+NDARETLKDGT LE KK K
Sbjct: 459 LQAAALFSLGMDNDARETLKDGTTLEGKKQK 489
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356496122|ref|XP_003516919.1| PREDICTED: LOW QUALITY PROTEIN: probable serine/threonine-protein kinase At5g41260-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 692 bits (1785), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 332/390 (85%), Positives = 354/390 (90%), Gaps = 1/390 (0%)
Query: 35 EAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQPMKWAMRLRVAL 94
EA+ VG+LRSERLANL+G CYE +ERLLVA FMP+ETL K LFHWE QPMKWAMRLRVA
Sbjct: 102 EARQVGSLRSERLANLVGYCYEGEERLLVAXFMPHETLGKLLFHWEAQPMKWAMRLRVAF 161
Query: 95 YLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLAFTPPE 154
YLAQALEYC+SKGR LYHDLNAYRILFD+D NPRLS FGLMK SRDGKSYSTNLAFTPPE
Sbjct: 162 YLAQALEYCTSKGRGLYHDLNAYRILFDQDANPRLSCFGLMKKSRDGKSYSTNLAFTPPE 221
Query: 155 YMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEG 214
Y+RTGRVTP+SVVYSFGT+LLDLLSGKHIPPS ALDLIR KNFL+LMDSALEGHFS D+G
Sbjct: 222 YLRTGRVTPQSVVYSFGTLLLDLLSGKHIPPSLALDLIRGKNFLMLMDSALEGHFSKDDG 281
Query: 215 TELVRLASRCLQSEARERPNAKSLVISLMSLQKEAEQVPSYVLLGIQHETAPSTKPLSLT 274
TELVRLASRCLQ EARERPNAKSLV SLMSLQ E E VPSYVL+G++ ETA K ++LT
Sbjct: 282 TELVRLASRCLQYEARERPNAKSLVASLMSLQNETE-VPSYVLMGLRQETASXNKAITLT 340
Query: 275 PLGEACSRLDLTAIHEILEGMGYKDDEGIANELSFQMWTSQMQETLNSKKHGDTAFRAKD 334
P GEAC RLDLTAIHEILE GYKDDEGIANELSFQ+WTSQMQETLN KKHGDTAFRAKD
Sbjct: 341 PFGEACLRLDLTAIHEILEKTGYKDDEGIANELSFQLWTSQMQETLNLKKHGDTAFRAKD 400
Query: 335 FSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQ 394
F TAIDCYTQFIDGGTMVSPTVYA RCLS LMNDM QEALGDAMQAQVVSP+WPTALYL
Sbjct: 401 FITAIDCYTQFIDGGTMVSPTVYAIRCLSLLMNDMAQEALGDAMQAQVVSPEWPTALYLH 460
Query: 395 AACLFSLGMENDARETLKDGTNLEAKKNKN 424
AACLFSLGMENDA+ETLKDGTN+E +KNKN
Sbjct: 461 AACLFSLGMENDAQETLKDGTNMEGRKNKN 490
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 424 | ||||||
| TAIR|locus:2084475 | 490 | BSK6 "brassinosteroid-signalin | 0.919 | 0.795 | 0.829 | 3.4e-182 | |
| TAIR|locus:2154538 | 489 | BSK5 "brassinosteroid-signalin | 0.922 | 0.799 | 0.818 | 1.3e-180 | |
| TAIR|locus:2127118 | 489 | BSK3 "brassinosteroid-signalin | 0.905 | 0.785 | 0.753 | 1.1e-159 | |
| TAIR|locus:2031279 | 487 | BSK7 "brassinosteroid-signalin | 0.910 | 0.792 | 0.751 | 4.8e-158 | |
| TAIR|locus:2155115 | 487 | BSK8 "brassinosteroid-signalin | 0.908 | 0.790 | 0.735 | 8.2e-154 | |
| TAIR|locus:2122058 | 512 | BSK1 "brassinosteroid-signalin | 0.915 | 0.757 | 0.680 | 2.1e-141 | |
| TAIR|locus:2198160 | 483 | BSK4 "brassinosteroid-signalin | 0.893 | 0.784 | 0.673 | 1.7e-137 | |
| TAIR|locus:2083499 | 477 | BSK9 "brassinosteroid-signalin | 0.912 | 0.811 | 0.659 | 3.7e-135 | |
| TAIR|locus:2150074 | 499 | BSK10 "brassinosteroid-signali | 0.912 | 0.775 | 0.626 | 6.2e-133 | |
| TAIR|locus:2142315 | 489 | BSK2 "brassinosteroid-signalin | 0.912 | 0.791 | 0.612 | 1.7e-130 |
| TAIR|locus:2084475 BSK6 "brassinosteroid-signaling kinase 6" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1700 (603.5 bits), Expect = 3.4e-182, Sum P(2) = 3.4e-182
Identities = 326/393 (82%), Positives = 359/393 (91%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQPMKWAMRLRV 92
L+EAKAVG+LRS+RLANLIGCC+E +ERLLVAEFMP+ETLAKHLFHWE PMKWAMRLRV
Sbjct: 98 LDEAKAVGSLRSDRLANLIGCCFEGEERLLVAEFMPHETLAKHLFHWENNPMKWAMRLRV 157
Query: 93 ALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLAFTP 152
AL LAQALEYCS+KGRALYHDLNAYR+LFDKDGNPRLS FGLMKNSRDGKSYSTNLAFTP
Sbjct: 158 ALCLAQALEYCSNKGRALYHDLNAYRVLFDKDGNPRLSCFGLMKNSRDGKSYSTNLAFTP 217
Query: 153 PEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSND 212
PEY+RTGRVTPESVV+SFGT+LLDL+SGKHIPPSHALDLIR KN +LMDSALEGHFSN+
Sbjct: 218 PEYLRTGRVTPESVVFSFGTVLLDLMSGKHIPPSHALDLIRGKNCAMLMDSALEGHFSNE 277
Query: 213 EGTELVRLASRCLQSEARERPNAKSLVISLMSLQKEAEQVPSYVLLGIQHET-APSTKPL 271
+GTELVRLA+RCLQ EARERPN KSLV SL++LQKE++ V SYVL+GI HET A PL
Sbjct: 278 DGTELVRLATRCLQYEARERPNVKSLVTSLVTLQKESD-VASYVLMGIPHETEAEEESPL 336
Query: 272 SLTPLGEACSRLDLTAIHEILEGMGYKDDEGIANELSFQMWTSQMQETLNSKKHGDTAFR 331
SLTP G+AC R+DLTAI EIL +GYKDDEGIANELSFQMWT+QMQE+LNSKK GD AFR
Sbjct: 337 SLTPFGDACLRVDLTAIQEILSKIGYKDDEGIANELSFQMWTNQMQESLNSKKQGDLAFR 396
Query: 332 AKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTAL 391
+KDF+TA+DCYTQFIDGGTMVSPTV+ARRCLSYLMND QEAL DA+QAQVVSPDWPTAL
Sbjct: 397 SKDFTTAVDCYTQFIDGGTMVSPTVHARRCLSYLMNDNAQEALTDALQAQVVSPDWPTAL 456
Query: 392 YLQAACLFSLGMENDARETLKDGTNLEAKK-NK 423
YLQAACLF LGME DA++ LKDGT LEAKK NK
Sbjct: 457 YLQAACLFKLGMEADAQQALKDGTTLEAKKSNK 489
|
|
| TAIR|locus:2154538 BSK5 "brassinosteroid-signaling kinase 5" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1683 (597.5 bits), Expect = 1.3e-180, Sum P(2) = 1.3e-180
Identities = 321/392 (81%), Positives = 354/392 (90%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQPMKWAMRLRV 92
LEEAKAVG LR+ERLANLIG C E DERLLVAEFMP ETL+KHLFHW++QPMKW+MRLRV
Sbjct: 97 LEEAKAVGQLRNERLANLIGFCCEGDERLLVAEFMPFETLSKHLFHWDSQPMKWSMRLRV 156
Query: 93 ALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLAFTP 152
ALYLAQALEYCSSKGRALYHDLNAYRILFD+DGNPRLS FGLMKNSRDGKSYSTNLAFTP
Sbjct: 157 ALYLAQALEYCSSKGRALYHDLNAYRILFDQDGNPRLSCFGLMKNSRDGKSYSTNLAFTP 216
Query: 153 PEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSND 212
PEY+RTGRV PESVVYSFGT+LLDLLSGKHIPPSHALDLIR KNFL+LMDS L+GHFSND
Sbjct: 217 PEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLDGHFSND 276
Query: 213 EGTELVRLASRCLQSEARERPNAKSLVISLMSLQKEAEQVPSYVLLGIQHETAPSTKPLS 272
+GT+LVRLASRCLQ EARERPN KSLV SL LQKE + +PS+VL+GI H A + S
Sbjct: 277 DGTDLVRLASRCLQYEARERPNVKSLVSSLAPLQKETD-IPSHVLMGIPHGAASPKETTS 335
Query: 273 LTPLGEACSRLDLTAIHEILEGMGYKDDEGIANELSFQMWTSQMQETLNSKKHGDTAFRA 332
LTPLG+ACSR DLTAIHEILE +GYKDDEG+ANELSFQ+WT Q+QETLNSKK GD AF+
Sbjct: 336 LTPLGDACSRHDLTAIHEILEKVGYKDDEGVANELSFQVWTDQIQETLNSKKQGDAAFKG 395
Query: 333 KDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALY 392
KDF TA++CYTQFI+ GTMVSPTV+ARRCL YLM++MPQEALGDAMQAQVVSP+WPTA Y
Sbjct: 396 KDFVTAVECYTQFIEDGTMVSPTVFARRCLCYLMSNMPQEALGDAMQAQVVSPEWPTAFY 455
Query: 393 LQAACLFSLGMENDARETLKDGTNLEAKKNKN 424
LQAA LFSLGM+ DA ETLKDGT+LEAKK+ N
Sbjct: 456 LQAAALFSLGMDKDACETLKDGTSLEAKKHNN 487
|
|
| TAIR|locus:2127118 BSK3 "brassinosteroid-signaling kinase 3" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1511 (537.0 bits), Expect = 1.1e-159, Sum P(2) = 1.1e-159
Identities = 294/390 (75%), Positives = 332/390 (85%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQPMKWAMRLRV 92
LEEA++VG LRSER+ANL+GCC E DERLLVAEFMPNETLAKHLFHWETQPMKW MRLRV
Sbjct: 100 LEEARSVGQLRSERMANLLGCCCEGDERLLVAEFMPNETLAKHLFHWETQPMKWTMRLRV 159
Query: 93 ALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLAFTP 152
LYLAQALEYC+SKGR LYHDLNAYR+LFD++ NPRLS+FGLMKNSRDGKSYSTNLAFTP
Sbjct: 160 VLYLAQALEYCTSKGRTLYHDLNAYRVLFDEECNPRLSTFGLMKNSRDGKSYSTNLAFTP 219
Query: 153 PEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSND 212
PEY+RTGR+TPESV+YSFGT+LLDLLSGKHIPPSHALDLIR +N L DS L+G FS+
Sbjct: 220 PEYLRTGRITPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQTLTDSCLDGQFSDS 279
Query: 213 EGTELVRLASRCLQSEARERPNAKSLVISLMSLQKEAEQVPSYVLLGIQHETAPSTKPLS 272
+GTELVRLASRCLQ EARERPN KSLV +L LQKE E V S+VL+G+ H + S PLS
Sbjct: 280 DGTELVRLASRCLQYEARERPNTKSLVTALTPLQKETE-VLSHVLMGLPH--SGSVSPLS 336
Query: 273 LTPLGEACSRLDLTAIHEILEGMGYKDDEGIANELSFQMWTSQMQETLNSKKHGDTAFRA 332
PLGEACSR DLTA+ EILE +GYKDDEG+ NELSF MWT QMQE+LNSKK GD AFR
Sbjct: 337 --PLGEACSRRDLTAMLEILEKLGYKDDEGVTNELSFHMWTDQMQESLNSKKKGDVAFRQ 394
Query: 333 KDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALY 392
KDF AI+CYTQFIDGG M+SPTV ARR L YLM+DMP+EAL DA+QAQV+SP W A Y
Sbjct: 395 KDFREAIECYTQFIDGG-MISPTVCARRSLCYLMSDMPKEALDDAIQAQVISPVWHVASY 453
Query: 393 LQAACLFSLGMENDARETLKDGTNLEAKKN 422
LQ+A L LGME +++ LK+G+NLEAK N
Sbjct: 454 LQSASLGILGMEKESQIALKEGSNLEAKMN 483
|
|
| TAIR|locus:2031279 BSK7 "brassinosteroid-signaling kinase 7" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1540 (547.2 bits), Expect = 4.8e-158, P = 4.8e-158
Identities = 294/391 (75%), Positives = 337/391 (86%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQPMKWAMRLRV 92
LEEAKAVG LR+ R+ANL+GCCYE +ERLLVAEFMPNETLAKHLFHWE+QPMKWAMRLRV
Sbjct: 101 LEEAKAVGQLRNYRMANLLGCCYEGEERLLVAEFMPNETLAKHLFHWESQPMKWAMRLRV 160
Query: 93 ALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLAFTP 152
AL++AQALEYC+ KGRALYHDLNAYR+LFD D NPRLS FGLMKNSRDGKSYSTNLAFTP
Sbjct: 161 ALHIAQALEYCTGKGRALYHDLNAYRVLFDDDSNPRLSCFGLMKNSRDGKSYSTNLAFTP 220
Query: 153 PEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSND 212
PEY+RTGRVTPESV+YS+GT+LLDLLSGKHIPPSHALDLIR +N +L+DS LEG FS+D
Sbjct: 221 PEYLRTGRVTPESVMYSYGTLLLDLLSGKHIPPSHALDLIRDRNIQMLIDSCLEGQFSSD 280
Query: 213 EGTELVRLASRCLQSEARERPNAKSLVISLMSLQKEAEQVPSYVLLGIQHETAPSTKPLS 272
+GTEL+RLASRCLQ E RERPN KSLV +++ LQK+ E PS+ L+GI ++ ST PLS
Sbjct: 281 DGTELIRLASRCLQYEPRERPNPKSLVTAMIPLQKDLE-TPSHQLMGIP--SSASTTPLS 337
Query: 273 LTPLGEACSRLDLTAIHEILEGMGYKDDEGIANELSFQMWTSQMQETLNSKKHGDTAFRA 332
PLGEAC R DLTAIHEILE + YKDDEG A ELSFQMWT+QMQ++LN KK GD AFR
Sbjct: 338 --PLGEACLRTDLTAIHEILEKLSYKDDEGAATELSFQMWTNQMQDSLNFKKKGDVAFRH 395
Query: 333 KDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALY 392
K+F+ AIDCY+QFI+GGTMVSPTVYARR L YLMN+MPQEAL DAMQAQV+SP W A Y
Sbjct: 396 KEFANAIDCYSQFIEGGTMVSPTVYARRSLCYLMNEMPQEALNDAMQAQVISPAWHIASY 455
Query: 393 LQAACLFSLGMENDARETLKDGTNLEAKKNK 423
LQA L +LG EN+A LKDG+ LE+K+N+
Sbjct: 456 LQAVALSALGQENEAHAALKDGSMLESKRNR 486
|
|
| TAIR|locus:2155115 BSK8 "brassinosteroid-signaling kinase 8" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1500 (533.1 bits), Expect = 8.2e-154, P = 8.2e-154
Identities = 287/390 (73%), Positives = 334/390 (85%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQPMKWAMRLRV 92
LEEAKAVG LR+ R+ANL+GCCYE +ERLL+AEFMPNETLAKHLFHWE+QPMKWAMRLRV
Sbjct: 101 LEEAKAVGQLRNHRMANLLGCCYEDEERLLIAEFMPNETLAKHLFHWESQPMKWAMRLRV 160
Query: 93 ALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLAFTP 152
AL++AQALEYC+SKGRALYHDLNAYR+LFD D NPRLS FGLMKNSRDGKSYSTNLAFTP
Sbjct: 161 ALHIAQALEYCTSKGRALYHDLNAYRVLFDDDANPRLSCFGLMKNSRDGKSYSTNLAFTP 220
Query: 153 PEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSND 212
PEY+RTGRVTPESV+YSFGT+LLDLLSGKHIPPSHALDLIR +N +LMDS LEG FS+D
Sbjct: 221 PEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQMLMDSGLEGQFSSD 280
Query: 213 EGTELVRLASRCLQSEARERPNAKSLVISLMSLQKEAEQVPSYVLLGIQHETAPSTKPLS 272
+GTEL+RLASRCLQ E RERPN KSLV +++ LQK+ E + S+ LLG+ + +A +T +
Sbjct: 281 DGTELIRLASRCLQYEPRERPNPKSLVSAMIPLQKDLE-IASHQLLGVPN-SATTT---A 335
Query: 273 LTPLGEACSRLDLTAIHEILEGMGYKDDEGIANELSFQMWTSQMQETLNSKKHGDTAFRA 332
L+PLGEAC R DLTAIHEI+E +GYKDDEG ELSFQMWT QMQ+TL KK GD+AFR
Sbjct: 336 LSPLGEACLRSDLTAIHEIIEKLGYKDDEGATTELSFQMWTDQMQDTLVFKKKGDSAFRH 395
Query: 333 KDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALY 392
KDF+ AI+CY+QFI+ GTM SPTV+AR+ L YLMNDMP+EAL +AMQAQV+SP W A Y
Sbjct: 396 KDFAKAIECYSQFIEVGTMGSPTVHARQSLCYLMNDMPREALNNAMQAQVISPAWHIASY 455
Query: 393 LQAACLFSLGMENDARETLKDGTNLEAKKN 422
LQA L +LG EN+A LKDG LE+K+N
Sbjct: 456 LQAVALSALGQENEAHTALKDGAMLESKRN 485
|
|
| TAIR|locus:2122058 BSK1 "brassinosteroid-signaling kinase 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1383 (491.9 bits), Expect = 2.1e-141, P = 2.1e-141
Identities = 266/391 (68%), Positives = 311/391 (79%)
Query: 34 EEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQPMKWAMRLRVA 93
EEA VG LR RLANLIG C + DERLLVAEFMPN+TLAKHLFHWE Q ++WAMRLRV
Sbjct: 119 EEAWGVGKLRHNRLANLIGYCCDGDERLLVAEFMPNDTLAKHLFHWENQTIEWAMRLRVG 178
Query: 94 LYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLAFTPP 153
Y+A+AL+YCS++GR LYHDLNAYR+LFD+DG+PRLS FGLMKNSRDGKSYSTNLA+TPP
Sbjct: 179 YYIAEALDYCSTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSRDGKSYSTNLAYTPP 238
Query: 154 EYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDE 213
EY+R GRVTPESV YSFGT+LLDLLSGKHIPPSHALD+IR KN +LLMDS LEG FS +E
Sbjct: 239 EYLRNGRVTPESVTYSFGTVLLDLLSGKHIPPSHALDMIRGKNIILLMDSHLEGKFSTEE 298
Query: 214 GTELVRLASRCLQSEARERPNAKSLVISLMSLQKEAEQVPSYVLLGIQ-HETAPSTKPLS 272
T +V LAS+CLQ E RERPN K LV +L LQ +++ VPSYV+LGI+ E APST
Sbjct: 299 ATVVVELASQCLQYEPRERPNTKDLVATLAPLQTKSD-VPSYVMLGIKKQEEAPSTPQRP 357
Query: 273 LTPLGEACSRLDLTAIHEILEGMGYKDDEGIANELSFQMWTSQMQETLNSKKHGDTAFRA 332
L+PLGEACSR+DLTAIH+IL Y+DDEG NELSFQ WT QM++ L+++K GD +FR
Sbjct: 358 LSPLGEACSRMDLTAIHQILVMTHYRDDEG-TNELSFQEWTQQMKDMLDARKRGDQSFRE 416
Query: 333 KDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALY 392
KDF TAIDCY+QFID GTMVSPTV+ RR L YL+ D P AL DAMQAQ V PDWPTA Y
Sbjct: 417 KDFKTAIDCYSQFIDVGTMVSPTVFGRRSLCYLLCDQPDAALRDAMQAQCVYPDWPTAFY 476
Query: 393 LQAACLFSLGMENDARETLKDGTNLEAKKNK 423
+Q+ L L M DA + L + LE K+ +
Sbjct: 477 MQSVALAKLNMNTDAADMLNEAAQLEEKRQR 507
|
|
| TAIR|locus:2198160 BSK4 "brassinosteroid-signaling kinase 4" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1312 (466.9 bits), Expect = 1.7e-137, Sum P(2) = 1.7e-137
Identities = 262/389 (67%), Positives = 313/389 (80%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQPMKWAMRLRV 92
LEEA+ VG LRS+R+ANL+G C E ERLLVAEFMPNETLAKHLFHW+T+PMKWAMRLRV
Sbjct: 98 LEEARLVGQLRSKRMANLLGYCCEGGERLLVAEFMPNETLAKHLFHWDTEPMKWAMRLRV 157
Query: 93 ALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLAFTP 152
ALY+++ALEYCS+ G LYHDLNAYR+LFD++ NPRLS+FGLMKNSRDGKSYSTNLAFTP
Sbjct: 158 ALYISEALEYCSNNGHTLYHDLNAYRVLFDEECNPRLSTFGLMKNSRDGKSYSTNLAFTP 217
Query: 153 PEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSND 212
PEY+RTGR+T ESV+YSFGT+LLDLL+GKHIPPSHALDLIR +N L DS LEG FS+
Sbjct: 218 PEYLRTGRITAESVIYSFGTLLLDLLTGKHIPPSHALDLIRDRNLQTLTDSCLEGQFSDS 277
Query: 213 EGTELVRLASRCLQSEARERPNAKSLVISLMSLQKEAEQVPSYVLLGIQHETAPSTKPLS 272
+GTELVRL S CLQ EARERPN KSLV +L+SLQK+ E V S+VL+G+ ++ P
Sbjct: 278 DGTELVRLTSCCLQYEARERPNIKSLVTALISLQKDTE-VLSHVLMGLPQSGTFASPP-- 334
Query: 273 LTPLGEACSRLDLTAIHEILEGMGYKDDEGIANELSFQMWTSQMQETLNSKKHGDTAFRA 332
+P EACS DLT++ EILE +GYKDDE +LSF MWT QMQE +NSKK GD AFR
Sbjct: 335 -SPFAEACSGKDLTSMVEILEKIGYKDDE----DLSF-MWTEQMQEAINSKKKGDIAFRR 388
Query: 333 KDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALY 392
KDFS AI+ YTQF+D G M+S TV RR SYLM++M +EAL DAM+AQ +SP W ALY
Sbjct: 389 KDFSEAIEFYTQFLDLG-MISATVLVRRSQSYLMSNMAKEALDDAMKAQGISPVWYVALY 447
Query: 393 LQAACLFSLGMENDARETLKDGTNLEAKK 421
LQ+A L LGME +++ L +G+ LEA+K
Sbjct: 448 LQSAALSVLGMEKESQIALTEGSILEARK 476
|
|
| TAIR|locus:2083499 BSK9 "brassinosteroid-signaling kinase 9" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1324 (471.1 bits), Expect = 3.7e-135, P = 3.7e-135
Identities = 258/391 (65%), Positives = 308/391 (78%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQPMKWAMRLRV 92
+EEA+AVG RSE +ANLIGCC E ERLLVAE+MPNETLAKHLFHWE +PMKW MRLRV
Sbjct: 86 IEEAQAVGRCRSEHMANLIGCCSEGHERLLVAEYMPNETLAKHLFHWEKRPMKWEMRLRV 145
Query: 93 ALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLAFTP 152
AL+ A ALEYC+ G LYHDLN YRILFDK GNPRLS FGLMK SR+GKSYSTNLAF P
Sbjct: 146 ALHTATALEYCNDWGIDLYHDLNTYRILFDKVGNPRLSCFGLMKCSREGKSYSTNLAFAP 205
Query: 153 PEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSND 212
PEY+R G V PESV +SFGT+LLDL+SG+HIPP+HALDL R KN+L+LMDSAL+G FS++
Sbjct: 206 PEYLRLGTVIPESVTFSFGTLLLDLMSGRHIPPNHALDLFRGKNYLVLMDSALDGQFSDE 265
Query: 213 EGTELVRLASRCLQSEARERPNAKSLVISLMSLQKEAEQVPSYVLLGIQHE--TAPSTK- 269
+ TEL+ LASRCL+ E ERP+ K L+ +L L+K AE P+ I T P+TK
Sbjct: 266 DRTELIHLASRCLRPEPDERPSIKFLMSALSRLEKRAELWPNVKEENIPTPSYTEPATKE 325
Query: 270 PLSLTPLGEACSRLDLTAIHEILEGMGY-KDDEGIANELSFQMWTSQMQETLNSKKHGDT 328
PL LTP GEAC R+DL+ +HE+LE +GY +DD + NE SFQMWT QMQE ++ KKHGD
Sbjct: 326 PLPLTPFGEACWRVDLSGMHELLEKLGYGEDDVVVTNEFSFQMWTGQMQENMDYKKHGDA 385
Query: 329 AFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWP 388
AFRAKDF TAI+ YT+F+ G +VSPTV ARRCL YLM+DM +EAL DAMQ QV SP++
Sbjct: 386 AFRAKDFETAIEFYTEFMSGAPVVSPTVLARRCLCYLMSDMFREALSDAMQTQVASPEFS 445
Query: 389 TALYLQAACLFSLGMENDARETLKDGTNLEA 419
ALYLQAACL LGME +A+E L+ G++LEA
Sbjct: 446 IALYLQAACLLKLGMEAEAKEALRHGSSLEA 476
|
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| TAIR|locus:2150074 BSK10 "brassinosteroid-signaling kinase 10" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1303 (463.7 bits), Expect = 6.2e-133, P = 6.2e-133
Identities = 247/394 (62%), Positives = 304/394 (77%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQPMKWAMRLRV 92
+ EA+AVG LRSE +ANLIGCC + +ERLLVAE+MPN TLAKHLFHWE +PMKW MRL+V
Sbjct: 105 INEAQAVGRLRSEHMANLIGCCCDDNERLLVAEYMPNGTLAKHLFHWEKRPMKWEMRLKV 164
Query: 93 ALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLAFTP 152
AL+ A+ALEYC+ KG LYHDLN YRI+FDK G P+LS FGLMKNS +GK YSTNLAF P
Sbjct: 165 ALHTARALEYCNDKGIDLYHDLNPYRIMFDKTGIPKLSCFGLMKNSHEGKIYSTNLAFAP 224
Query: 153 PEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSND 212
PEY+R G V ESV +SFGT+LLDL+SG+HIPP+HALDL R KN+L+LMDSAL+G FS++
Sbjct: 225 PEYLRLGTVIAESVTFSFGTLLLDLMSGRHIPPNHALDLFRGKNYLVLMDSALDGQFSDE 284
Query: 213 EGTELVRLASRCLQSEARERPNAKSLVISLMSLQKEAEQVPSYVLL-------GIQHETA 265
+ TEL+ +ASRC ++E ERP+ K L +L LQK A+ P V + +T
Sbjct: 285 DRTELIHVASRCFKTEPEERPSIKFLKATLSRLQKRAKLCPINVKRPMSPPSKNLPEKTK 344
Query: 266 PSTKPLSLTPLGEACSRLDLTAIHEILEGMGYKDDEGIANELSFQMWTSQMQETLNSKKH 325
P+T+ L LTP G+ACSR DL++IHE+LE +GY++D G+ NE SFQMWT +MQE ++ KKH
Sbjct: 345 PATESLKLTPFGDACSRADLSSIHELLEKLGYEEDNGVGNEFSFQMWTGEMQENMDYKKH 404
Query: 326 GDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSP 385
GD AF AKDF TAI+ YT+F+ G VSPTV ARRCL YLM +M EAL DAMQAQV SP
Sbjct: 405 GDAAFLAKDFDTAIEFYTEFMTGAPTVSPTVLARRCLCYLMTEMFSEALSDAMQAQVASP 464
Query: 386 DWPTALYLQAACLFSLGMENDARETLKDGTNLEA 419
+WP LYLQAACLF L ME +A+E L+ G+ LEA
Sbjct: 465 EWPIPLYLQAACLFKLEMEAEAKEALRHGSALEA 498
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| TAIR|locus:2142315 BSK2 "brassinosteroid-signaling kinase 2" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1280 (455.6 bits), Expect = 1.7e-130, P = 1.7e-130
Identities = 239/390 (61%), Positives = 308/390 (78%)
Query: 35 EAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQPMKWAMRLRVAL 94
EA VG LR++R+ +LIGCC E DERLLVAE+MPN+TL+KHLFHWE QP+ W MR+R+A
Sbjct: 100 EATGVGKLRNKRIVSLIGCCAEGDERLLVAEYMPNDTLSKHLFHWEKQPLPWDMRVRIAD 159
Query: 95 YLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLAFTPPE 154
Y+A+AL+YC+ + R +YHDLNAYRILFD++G+PRLS+FGLMKNSRDGKSYSTNLA+TPPE
Sbjct: 160 YIAEALDYCNIENRKIYHDLNAYRILFDEEGDPRLSTFGLMKNSRDGKSYSTNLAYTPPE 219
Query: 155 YMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEG 214
++RTGRV PESV++S+GT+LLDLLSGKHIPPSHALD+IR KN LLLMDS+LEG ++ND+
Sbjct: 220 FLRTGRVIPESVIFSYGTILLDLLSGKHIPPSHALDIIRGKNALLLMDSSLEGQYANDDA 279
Query: 215 TELVRLASRCLQSEARERPNAKSLVISLMSLQKEAEQVPSYVLLGIQHETAPSTKPLSLT 274
T+LV LAS+CLQSEA++RP+ K L+ ++ LQK+ E+V S+VL+G+ T P L+
Sbjct: 280 TKLVDLASKCLQSEAKDRPDTKFLLSAVAPLQKQ-EEVASHVLMGLPKNTV--ILPTMLS 336
Query: 275 PLGEACSRLDLTAIHEILEGMGYKDDEGIANELSFQMWTSQMQETLNSKKHGDTAFRAKD 334
PLG+AC+++DL H+IL GY+D+EG NELSFQ WT Q+QE LN+KK GD AFR KD
Sbjct: 337 PLGKACAKMDLATFHDILLKTGYRDEEGAENELSFQEWTQQVQEMLNTKKFGDIAFRDKD 396
Query: 335 FSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQ 394
F +I+ Y++ + + S TV+ARR SYLM D + AL DAMQAQV P+WPTA YLQ
Sbjct: 397 FKNSIEYYSKLVGMMPVPSATVFARRAFSYLMTDQQELALRDAMQAQVCIPEWPTAFYLQ 456
Query: 395 AACLFSLGMENDARETLKDGTNLEAKKNKN 424
A L LGME DA++ L DG +AK+ +
Sbjct: 457 ALALSKLGMETDAQDMLNDGAAYDAKRQNS 486
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
No confident hit for EC number transfering in SWISSPROT detected by BLAST
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
No EC number assignment, probably not an enzyme!
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
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 | estExt_fgenesh4_pg.C_LG_VI0748 | hypothetical protein (491 aa) | |||||||||
(Populus trichocarpa) | |||||||||||
Predicted Functional Partners: | |||||||||||
| Sorry, there are no predicted associations at the current settings. | |||||||||||
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 424 | |||
| cd00180 | 215 | cd00180, PKc, Catalytic domain of Protein Kinases | 2e-22 | |
| smart00221 | 258 | smart00221, STYKc, Protein kinase; unclassified sp | 7e-19 | |
| smart00219 | 257 | smart00219, TyrKc, Tyrosine kinase, catalytic doma | 4e-18 | |
| pfam00069 | 260 | pfam00069, Pkinase, Protein kinase domain | 4e-17 | |
| cd00192 | 262 | cd00192, PTKc, Catalytic domain of Protein Tyrosin | 5e-17 | |
| pfam07714 | 258 | pfam07714, Pkinase_Tyr, Protein tyrosine kinase | 1e-15 | |
| cd05039 | 256 | cd05039, PTKc_Csk_like, Catalytic domain of C-term | 8e-13 | |
| smart00220 | 254 | smart00220, S_TKc, Serine/Threonine protein kinase | 2e-12 | |
| cd05083 | 254 | cd05083, PTKc_Chk, Catalytic domain of the Protein | 5e-12 | |
| cd05038 | 284 | cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domai | 3e-11 | |
| cd05080 | 283 | cd05080, PTKc_Tyk2_rpt2, Catalytic (repeat 2) doma | 3e-10 | |
| cd05041 | 251 | cd05041, PTKc_Fes_like, Catalytic domain of Fes-li | 3e-10 | |
| cd05113 | 256 | cd05113, PTKc_Btk_Bmx, Catalytic domain of the Pro | 5e-10 | |
| COG0515 | 384 | COG0515, SPS1, Serine/threonine protein kinase [Ge | 5e-09 | |
| cd05059 | 256 | cd05059, PTKc_Tec_like, Catalytic domain of Tec-li | 5e-09 | |
| cd05082 | 256 | cd05082, PTKc_Csk, Catalytic domain of the Protein | 1e-08 | |
| cd05123 | 250 | cd05123, STKc_AGC, Catalytic domain of AGC family | 1e-08 | |
| cd05122 | 253 | cd05122, PKc_STE, Catalytic domain of STE family P | 2e-08 | |
| cd05084 | 252 | cd05084, PTKc_Fes, Catalytic domain of the Protein | 2e-08 | |
| cd05085 | 250 | cd05085, PTKc_Fer, Catalytic domain of the Protein | 3e-08 | |
| cd08529 | 256 | cd08529, STKc_FA2-like, Catalytic domain of the Pr | 7e-08 | |
| cd05068 | 261 | cd05068, PTKc_Frk_like, Catalytic domain of Fyn-re | 1e-07 | |
| cd05114 | 256 | cd05114, PTKc_Tec_Rlk, Catalytic domain of the Pro | 2e-07 | |
| cd05049 | 280 | cd05049, PTKc_Trk, Catalytic domain of the Protein | 2e-07 | |
| PLN00113 | 968 | PLN00113, PLN00113, leucine-rich repeat receptor-l | 2e-07 | |
| cd05069 | 260 | cd05069, PTKc_Yes, Catalytic domain of the Protein | 4e-07 | |
| cd08217 | 265 | cd08217, STKc_Nek2, Catalytic domain of the Protei | 4e-07 | |
| cd05071 | 262 | cd05071, PTKc_Src, Catalytic domain of the Protein | 5e-07 | |
| cd05112 | 256 | cd05112, PTKc_Itk, Catalytic domain of the Protein | 6e-07 | |
| cd05078 | 258 | cd05078, PTK_Jak2_Jak3_rpt1, Pseudokinase (repeat | 7e-07 | |
| cd05590 | 320 | cd05590, STKc_nPKC_eta, Catalytic domain of the Pr | 9e-07 | |
| cd06632 | 258 | cd06632, STKc_MEKK1_plant, Catalytic domain of the | 1e-06 | |
| cd05070 | 260 | cd05070, PTKc_Fyn_Yrk, Catalytic domain of the Pro | 1e-06 | |
| cd05579 | 265 | cd05579, STKc_MAST_like, Catalytic domain of Micro | 2e-06 | |
| cd05033 | 266 | cd05033, PTKc_EphR, Catalytic domain of Ephrin Rec | 2e-06 | |
| cd05148 | 261 | cd05148, PTKc_Srm_Brk, Catalytic domain of the Pro | 2e-06 | |
| cd05072 | 261 | cd05072, PTKc_Lyn, Catalytic domain of the Protein | 3e-06 | |
| cd05034 | 261 | cd05034, PTKc_Src_like, Catalytic domain of Src ki | 3e-06 | |
| cd05093 | 288 | cd05093, PTKc_TrkB, Catalytic domain of the Protei | 4e-06 | |
| cd05036 | 277 | cd05036, PTKc_ALK_LTK, Catalytic domain of the Pro | 5e-06 | |
| cd06610 | 267 | cd06610, STKc_OSR1_SPAK, Catalytic domain of the P | 7e-06 | |
| cd06654 | 296 | cd06654, STKc_PAK1, Catalytic domain of the Protei | 7e-06 | |
| cd05052 | 263 | cd05052, PTKc_Abl, Catalytic domain of the Protein | 7e-06 | |
| cd05619 | 316 | cd05619, STKc_nPKC_theta, Catalytic domain of the | 7e-06 | |
| cd05096 | 304 | cd05096, PTKc_DDR1, Catalytic domain of the Protei | 7e-06 | |
| cd06627 | 254 | cd06627, STKc_Cdc7_like, Catalytic domain of Cell | 7e-06 | |
| cd06657 | 292 | cd06657, STKc_PAK4, Catalytic domain of the Protei | 9e-06 | |
| cd05067 | 260 | cd05067, PTKc_Lck_Blk, Catalytic domain of the Pro | 9e-06 | |
| cd05075 | 272 | cd05075, PTKc_Axl, Catalytic domain of the Protein | 1e-05 | |
| cd05577 | 277 | cd05577, STKc_GRK, Catalytic domain of the Protein | 1e-05 | |
| cd05048 | 283 | cd05048, PTKc_Ror, Catalytic Domain of the Protein | 1e-05 | |
| cd05583 | 288 | cd05583, STKc_MSK_N, N-terminal catalytic domain o | 2e-05 | |
| cd05079 | 284 | cd05079, PTKc_Jak1_rpt2, Catalytic (repeat 2) doma | 2e-05 | |
| cd06642 | 277 | cd06642, STKc_STK25-YSK1, Catalytic domain of the | 2e-05 | |
| cd05098 | 307 | cd05098, PTKc_FGFR1, Catalytic domain of the Prote | 2e-05 | |
| cd05620 | 316 | cd05620, STKc_nPKC_delta, Catalytic domain of the | 2e-05 | |
| cd06606 | 260 | cd06606, STKc_MAPKKK, Catalytic domain of the Prot | 2e-05 | |
| cd05040 | 257 | cd05040, PTKc_Ack_like, Catalytic domain of the Pr | 2e-05 | |
| cd06614 | 286 | cd06614, STKc_PAK, Catalytic domain of the Protein | 2e-05 | |
| cd06623 | 264 | cd06623, PKc_MAPKK_plant_like, Catalytic domain of | 3e-05 | |
| cd05582 | 318 | cd05582, STKc_RSK_N, N-terminal catalytic domain o | 4e-05 | |
| cd05097 | 295 | cd05097, PTKc_DDR_like, Catalytic domain of Discoi | 5e-05 | |
| cd06656 | 297 | cd06656, STKc_PAK3, Catalytic domain of the Protei | 5e-05 | |
| cd05608 | 280 | cd05608, STKc_GRK1, Catalytic domain of the Protei | 6e-05 | |
| cd05094 | 291 | cd05094, PTKc_TrkC, Catalytic domain of the Protei | 7e-05 | |
| cd00189 | 100 | cd00189, TPR, Tetratricopeptide repeat domain; typ | 7e-05 | |
| cd05630 | 285 | cd05630, STKc_GRK6, Catalytic domain of the Protei | 7e-05 | |
| cd05073 | 260 | cd05073, PTKc_Hck, Catalytic domain of the Protein | 8e-05 | |
| cd05058 | 262 | cd05058, PTKc_Met_Ron, Catalytic domain of the Pro | 8e-05 | |
| cd08215 | 258 | cd08215, STKc_Nek, Catalytic domain of the Protein | 9e-05 | |
| cd06641 | 277 | cd06641, STKc_MST3, Catalytic domain of the Protei | 9e-05 | |
| cd06648 | 285 | cd06648, STKc_PAK_II, Catalytic domain of the Prot | 9e-05 | |
| cd05592 | 316 | cd05592, STKc_nPKC_theta_delta, Catalytic domain o | 1e-04 | |
| cd06647 | 293 | cd06647, STKc_PAK_I, Catalytic domain of the Prote | 1e-04 | |
| cd06917 | 277 | cd06917, STKc_NAK1_like, Catalytic domain of Funga | 1e-04 | |
| cd06651 | 266 | cd06651, STKc_MEKK3, Catalytic domain of the Prote | 1e-04 | |
| cd05044 | 269 | cd05044, PTKc_c-ros, Catalytic domain of the Prote | 2e-04 | |
| cd05064 | 266 | cd05064, PTKc_EphR_A10, Catalytic domain of the Pr | 2e-04 | |
| cd06658 | 292 | cd06658, STKc_PAK5, Catalytic domain of the Protei | 2e-04 | |
| cd05100 | 334 | cd05100, PTKc_FGFR3, Catalytic domain of the Prote | 3e-04 | |
| cd06611 | 280 | cd06611, STKc_SLK_like, Catalytic domain of Ste20- | 4e-04 | |
| cd05095 | 296 | cd05095, PTKc_DDR2, Catalytic domain of the Protei | 4e-04 | |
| cd05632 | 285 | cd05632, STKc_GRK5, Catalytic domain of the Protei | 5e-04 | |
| cd06649 | 331 | cd06649, PKc_MEK2, Catalytic domain of the dual-sp | 5e-04 | |
| cd06630 | 268 | cd06630, STKc_MEKK1, Catalytic domain of the Prote | 5e-04 | |
| cd05081 | 284 | cd05081, PTKc_Jak2_Jak3_rpt2, Catalytic (repeat 2) | 6e-04 | |
| cd05612 | 291 | cd05612, STKc_PRKX_like, Catalytic domain of PRKX- | 6e-04 | |
| cd05045 | 290 | cd05045, PTKc_RET, Catalytic domain of the Protein | 7e-04 | |
| cd05621 | 370 | cd05621, STKc_ROCK2, Catalytic domain of the Prote | 8e-04 | |
| cd05617 | 327 | cd05617, STKc_aPKC_zeta, Catalytic domain of the P | 9e-04 | |
| cd06615 | 308 | cd06615, PKc_MEK, Catalytic domain of the dual-spe | 0.001 | |
| cd05053 | 293 | cd05053, PTKc_FGFR, Catalytic domain of the Protei | 0.001 | |
| pfam13414 | 69 | pfam13414, TPR_11, TPR repeat | 0.001 | |
| cd05575 | 323 | cd05575, STKc_SGK, Catalytic domain of the Protein | 0.001 | |
| cd05611 | 260 | cd05611, STKc_Rim15_like, Catalytic domain of fung | 0.001 | |
| cd05090 | 283 | cd05090, PTKc_Ror1, Catalytic domain of the Protei | 0.001 | |
| cd05056 | 270 | cd05056, PTKc_FAK, Catalytic domain of the Protein | 0.001 | |
| cd06650 | 333 | cd06650, PKc_MEK1, Catalytic domain of the dual-sp | 0.001 | |
| cd06629 | 272 | cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain o | 0.001 | |
| cd05588 | 329 | cd05588, STKc_aPKC, Catalytic domain of the Protei | 0.001 | |
| cd07864 | 302 | cd07864, STKc_CDK12, Catalytic domain of the Serin | 0.001 | |
| cd05593 | 328 | cd05593, STKc_PKB_gamma, Catalytic domain of the P | 0.001 | |
| cd05605 | 285 | cd05605, STKc_GRK4_like, Catalytic domain of G pro | 0.001 | |
| cd06628 | 267 | cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain o | 0.001 | |
| cd05622 | 371 | cd05622, STKc_ROCK1, Catalytic domain of the Prote | 0.002 | |
| cd05110 | 303 | cd05110, PTKc_HER4, Catalytic domain of the Protei | 0.002 | |
| cd06605 | 265 | cd06605, PKc_MAPKK, Catalytic domain of the dual-s | 0.002 | |
| cd05570 | 318 | cd05570, STKc_PKC, Catalytic domain of the Protein | 0.002 | |
| cd05591 | 321 | cd05591, STKc_nPKC_epsilon, Catalytic domain of th | 0.002 | |
| cd05584 | 323 | cd05584, STKc_p70S6K, Catalytic domain of the Prot | 0.002 | |
| cd05060 | 257 | cd05060, PTKc_Syk_like, Catalytic domain of Spleen | 0.002 | |
| cd05581 | 280 | cd05581, STKc_PDK1, Catalytic domain of the Protei | 0.002 | |
| cd05618 | 329 | cd05618, STKc_aPKC_iota, Catalytic domain of the P | 0.002 | |
| cd05604 | 325 | cd05604, STKc_SGK3, Catalytic domain of the Protei | 0.003 | |
| cd05594 | 325 | cd05594, STKc_PKB_alpha, Catalytic domain of the P | 0.003 | |
| cd05061 | 288 | cd05061, PTKc_InsR, Catalytic domain of the Protei | 0.003 | |
| cd05616 | 323 | cd05616, STKc_cPKC_beta, Catalytic domain of the P | 0.003 | |
| cd05099 | 314 | cd05099, PTKc_FGFR4, Catalytic domain of the Prote | 0.003 | |
| cd05063 | 268 | cd05063, PTKc_EphR_A2, Catalytic domain of the Pro | 0.003 | |
| cd06612 | 256 | cd06612, STKc_MST1_2, Catalytic domain of the Prot | 0.003 | |
| PHA02988 | 283 | PHA02988, PHA02988, hypothetical protein; Provisio | 0.003 | |
| cd06618 | 296 | cd06618, PKc_MKK7, Catalytic domain of the dual-sp | 0.004 | |
| cd05057 | 279 | cd05057, PTKc_EGFR_like, Catalytic domain of Epide | 0.004 | |
| cd05062 | 277 | cd05062, PTKc_IGF-1R, Catalytic domain of the Prot | 0.004 | |
| cd05092 | 280 | cd05092, PTKc_TrkA, Catalytic domain of the Protei | 0.004 |
| >gnl|CDD|173623 cd00180, PKc, Catalytic domain of Protein Kinases | Back alignment and domain information |
|---|
Score = 94.2 bits (235), Expect = 2e-22
Identities = 56/230 (24%), Positives = 85/230 (36%), Gaps = 47/230 (20%)
Query: 17 LKSSVLESSDLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHL 76
+K E S L E + + L + L G + + LV E+ +L L
Sbjct: 23 IKIIKKEDSSSLLEELLREIEILKKLNHPNIVKLYGVFEDENHLYLVMEYCEGGSLKDLL 82
Query: 77 FHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYH-DLNAYRILFDKD-GNPRLSSFGL 134
E + LR+ L + + LEY S G + H DL IL D D G +L+ FGL
Sbjct: 83 KENE-GKLSEDEILRILLQILEGLEYLHSNG--IIHRDLKPENILLDSDNGKVKLADFGL 139
Query: 135 MKNSRDGKSYST----NLAFTPPE-YMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHAL 189
K KS A+ PE + G + +S ++S G +L +L
Sbjct: 140 SKLLTSDKSLLKTIVGTPAYMAPEVLLGKGYYSEKSDIWSLGVILYEL--------PELK 191
Query: 190 DLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERPNAKSLV 239
DLIR + LQ + +RP+AK ++
Sbjct: 192 DLIR-----------------------------KMLQKDPEKRPSAKEIL 212
|
Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which one kinase activates a second kinase, which in turn, may act on other kinases; this sequential action transmits a signal from the cell surface to target proteins, which results in cellular responses. The PK family is one of the largest known protein families with more than 100 homologous yeast enzymes and 550 human proteins. A fraction of PK family members are pseudokinases that lack crucial residues for catalytic activity. The mutiplicity of kinases allows for specific regulation according to substrate, tissue distribution, and cellular localization. PKs regulate many cellular processes including proliferation, division, differentiation, motility, survival, metabolism, cell-cycle progression, cytoskeletal rearrangement, immunity, and neuronal functions. Many kinases are implicated in the development of various human diseases including different types of cancer. Length = 215 |
| >gnl|CDD|214568 smart00221, STYKc, Protein kinase; unclassified specificity | Back alignment and domain information |
|---|
Score = 85.3 bits (212), Expect = 7e-19
Identities = 55/221 (24%), Positives = 97/221 (43%), Gaps = 22/221 (9%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQPMKWAMRLRV 92
L EA+ + L + L+G C E + ++V E+MP L +L + + + L
Sbjct: 49 LREARIMRKLDHPNIVKLLGVCTEEEPLMIVMEYMPGGDLLDYLRKNRPKELSLSDLLSF 108
Query: 93 ALYLAQALEYCSSKGRALYH-DLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLA-- 149
AL +A+ +EY SK H DL A L ++ ++S FGL ++ D Y
Sbjct: 109 ALQIARGMEYLESKN--FIHRDLAARNCLVGENLVVKISDFGLSRDLYDDDYYKVKGGKL 166
Query: 150 ---FTPPEYMRTGRVTPESVVYSFGTMLLDLLS-GK----HIPPSHALDLIRSKNFLLLM 201
+ PE ++ G+ T +S V+SFG +L ++ + G+ + + L+ ++ L
Sbjct: 167 PIRWMAPESLKEGKFTSKSDVWSFGVLLWEIFTLGEEPYPGMSNAEVLEYLKKGYRLPKP 226
Query: 202 DSALEGHFSNDEGTELVRLASRCLQSEARERPNAKSLVISL 242
+ EL +L +C + +RP LV L
Sbjct: 227 PNCPP---------ELYKLMLQCWAEDPEDRPTFSELVEIL 258
|
Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase. Length = 258 |
| >gnl|CDD|197581 smart00219, TyrKc, Tyrosine kinase, catalytic domain | Back alignment and domain information |
|---|
Score = 83.3 bits (207), Expect = 4e-18
Identities = 54/221 (24%), Positives = 93/221 (42%), Gaps = 23/221 (10%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQPMKWAMRLRV 92
L EA+ + L + L+G C E + +V E+M L +L + + L
Sbjct: 49 LREARIMRKLDHPNVVKLLGVCTEEEPLYIVMEYMEGGDLLSYL-RKNRPKLSLSDLLSF 107
Query: 93 ALYLAQALEYCSSKGRALYH-DLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLA-- 149
AL +A+ +EY SK H DL A L ++ ++S FGL ++ D Y
Sbjct: 108 ALQIARGMEYLESKN--FIHRDLAARNCLVGENLVVKISDFGLSRDLYDDDYYRKRGGKL 165
Query: 150 ---FTPPEYMRTGRVTPESVVYSFGTMLLDLLS-GK----HIPPSHALDLIRSKNFLLLM 201
+ PE ++ G+ T +S V+SFG +L ++ + G+ + L+ +++ L
Sbjct: 166 PIRWMAPESLKEGKFTSKSDVWSFGVLLWEIFTLGEQPYPGMSNEEVLEYLKNGYRLPQP 225
Query: 202 DSALEGHFSNDEGTELVRLASRCLQSEARERPNAKSLVISL 242
+ EL L +C + +RP LV L
Sbjct: 226 PNCPP---------ELYDLMLQCWAEDPEDRPTFSELVEIL 257
|
Phosphotransferases. Tyrosine-specific kinase subfamily. Length = 257 |
| >gnl|CDD|215690 pfam00069, Pkinase, Protein kinase domain | Back alignment and domain information |
|---|
Score = 80.4 bits (199), Expect = 4e-17
Identities = 57/216 (26%), Positives = 91/216 (42%), Gaps = 13/216 (6%)
Query: 32 NLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQPMKWAMRLR 91
E + + L + LI + D LV E+ L +L P+ +
Sbjct: 45 ARREIRILRRLSHPNIVRLIDAFEDKDHLYLVMEYCEGGDLFDYLS--RGGPLSEDEAKK 102
Query: 92 VALYLAQALEYCSSKGRALYH-DLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLAF 150
+AL + + LEY S G + H DL IL D++G +++ FGL K S T
Sbjct: 103 IALQILRGLEYLHSNG--IIHRDLKPENILLDENGVVKIADFGLAKKLLKSSSSLTTFVG 160
Query: 151 TP----PEYMRTGR-VTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSAL 205
TP PE + G P+ V+S G +L +LL+GK P S L + + ++ L
Sbjct: 161 TPWYMAPEVLLGGNGYGPKVDVWSLGVILYELLTGKP-PFSGENILDQLQLIRRILGPPL 219
Query: 206 EGHF--SNDEGTELVRLASRCLQSEARERPNAKSLV 239
E + E L +CL + +RP A+ ++
Sbjct: 220 EFDEPKWSSGSEEAKDLIKKCLNKDPSKRPTAEEIL 255
|
Length = 260 |
| >gnl|CDD|173624 cd00192, PTKc, Catalytic domain of Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 80.3 bits (199), Expect = 5e-17
Identities = 57/228 (25%), Positives = 96/228 (42%), Gaps = 28/228 (12%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHL-------FHWETQPMK 85
L+EA+ + L + L+G C E + LV E+M L +L E +
Sbjct: 44 LKEARVMKKLGHPNVVRLLGVCTEEEPLYLVLEYMEGGDLLDYLRKSRPVFPSPEKSTLS 103
Query: 86 WAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYS 145
L A+ +A+ +EY +SK + ++ DL A L +D ++S FGL ++ D Y
Sbjct: 104 LKDLLSFAIQIAKGMEYLASK-KFVHRDLAARNCLVGEDLVVKISDFGLSRDVYDDDYYR 162
Query: 146 TN------LAFTPPEYMRTGRVTPESVVYSFGTMLLDLLS-GKH----IPPSHALDLIRS 194
+ + PE ++ G T +S V+SFG +L ++ + G + L+ +R
Sbjct: 163 KKTGGKLPIRWMAPESLKDGIFTSKSDVWSFGVLLWEIFTLGATPYPGLSNEEVLEYLRK 222
Query: 195 KNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERPNAKSLVISL 242
L + + EL L C Q + +RP LV L
Sbjct: 223 GYRLPKPEYCPD---------ELYELMLSCWQLDPEDRPTFSELVERL 261
|
Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain, leading to intracellular signaling. Some RTKs are orphan receptors with no known ligands. Non-receptor (or cytoplasmic) tyr kinases are distributed in different intracellular compartments and are usually multi-domain proteins containing a catalytic tyr kinase domain as well as various regulatory domains such as SH3 and SH2. PTKs are usually autoinhibited and require a mechanism for activation. In many PTKs, the phosphorylation of tyr residues in the activation loop is essential for optimal activity. Aberrant expression of PTKs is associated with many development abnormalities and cancers. Length = 262 |
| >gnl|CDD|219530 pfam07714, Pkinase_Tyr, Protein tyrosine kinase | Back alignment and domain information |
|---|
Score = 76.0 bits (188), Expect = 1e-15
Identities = 55/222 (24%), Positives = 93/222 (41%), Gaps = 24/222 (10%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQPMKWAMRLRV 92
LEEA + L + L+G C + + +V E+MP L L + + L++
Sbjct: 49 LEEASIMKKLSHPNIVRLLGVCTQGEPLYIVTEYMPGGDLLDFL-RKHGEKLTLKDLLQM 107
Query: 93 ALYLAQALEYCSSKGRALYH-DLNAYRILFDKDGNPRLSSFGLMKN-SRDGKSYSTNLAF 150
AL +A+ +EY SK H DL A L ++ ++S FGL ++ D
Sbjct: 108 ALQIAKGMEYLESKN--FVHRDLAARNCLVTENLVVKISDFGLSRDIYEDDYYRKRGGGK 165
Query: 151 TP-----PEYMRTGRVTPESVVYSFGTMLLDLLSG-----KHIPPSHALDLIRSKNFLLL 200
P PE ++ G+ T +S V+SFG +L ++ + + L+L+ L
Sbjct: 166 LPIKWMAPESLKDGKFTSKSDVWSFGVLLWEIFTLGEQPYPGMSNEEVLELLEDGYRLPR 225
Query: 201 MDSALEGHFSNDEGTELVRLASRCLQSEARERPNAKSLVISL 242
++ + EL L +C + +RP LV L
Sbjct: 226 PENCPD---------ELYELMLQCWAYDPEDRPTFSELVEDL 258
|
Length = 258 |
| >gnl|CDD|133171 cd05039, PTKc_Csk_like, Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 67.8 bits (166), Expect = 8e-13
Identities = 44/153 (28%), Positives = 75/153 (49%), Gaps = 2/153 (1%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQPMKWAMRLRV 92
L EA + LR L L+G + + +V E+M +L +L + A +L
Sbjct: 48 LAEASVMTTLRHPNLVQLLGVVLQGNPLYIVTEYMAKGSLVDYLRSRGRAVITLAQQLGF 107
Query: 93 ALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG-KSYSTNLAFT 151
AL + + +EY K ++ DL A +L +D ++S FGL K + G S + +T
Sbjct: 108 ALDVCEGMEYLEEK-NFVHRDLAARNVLVSEDLVAKVSDFGLAKEASQGQDSGKLPVKWT 166
Query: 152 PPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIP 184
PE +R + + +S V+SFG +L ++ S +P
Sbjct: 167 APEALREKKFSTKSDVWSFGILLWEIYSFGRVP 199
|
Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As negative regulators of Src kinases, Csk and Chk play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Length = 256 |
| >gnl|CDD|214567 smart00220, S_TKc, Serine/Threonine protein kinases, catalytic domain | Back alignment and domain information |
|---|
Score = 66.4 bits (163), Expect = 2e-12
Identities = 51/217 (23%), Positives = 80/217 (36%), Gaps = 24/217 (11%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQPMKWAMRLRV 92
L E K + L+ + L + D+ LV E+ L L A
Sbjct: 45 LREIKILKKLKHPNIVRLYDVFEDEDKLYLVMEYCEGGDLFDLLKKRGRLSEDEA--RFY 102
Query: 93 ALYLAQALEYCSSKGRALYHDL---NAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTN-- 147
+ ALEY SKG ++ DL N IL D+DG+ +L+ FGL + G+ +T
Sbjct: 103 LRQILSALEYLHSKGI-VHRDLKPEN---ILLDEDGHVKLADFGLARQLDPGEKLTTFVG 158
Query: 148 -LAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGK-----HIPPSHALDLIRSKNFLLLM 201
+ PE + ++S G +L +LL+GK I
Sbjct: 159 TPEYMAPEVLLGKGYGKAVDIWSLGVILYELLTGKPPFPGDDQLLELFKKIGKPKPPFPP 218
Query: 202 DSALEGHFSNDEGTELVRLASRCLQSEARERPNAKSL 238
E S E +L+R + L + +R A+
Sbjct: 219 P---EWDIS-PEAKDLIR---KLLVKDPEKRLTAEEA 248
|
Phosphotransferases. Serine or threonine-specific kinase subfamily. Length = 254 |
| >gnl|CDD|133214 cd05083, PTKc_Chk, Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase | Back alignment and domain information |
|---|
Score = 65.4 bits (159), Expect = 5e-12
Identities = 53/222 (23%), Positives = 99/222 (44%), Gaps = 20/222 (9%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQPMKWAMRLRV 92
LEE + L + L L+G + +V E M L L + L+
Sbjct: 47 LEETAVMTKLHHKNLVRLLGVILH-NGLYIVMELMSKGNLVNFLRTRGRALVSVIQLLQF 105
Query: 93 ALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMK-NSRDGKSYSTNLAFT 151
+L +A+ +EY SK + ++ DL A IL +DG ++S FGL + S + + +T
Sbjct: 106 SLDVAEGMEYLESK-KLVHRDLAARNILVSEDGVAKVSDFGLARVGSMGVDNSKLPVKWT 164
Query: 152 PPEYMRTGRVTPESVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKNFLLLMDSALEGHFS 210
PE ++ + + +S V+S+G +L ++ S G+ P +L ++ +E +
Sbjct: 165 APEALKHKKFSSKSDVWSYGVLLWEVFSYGRAPYPKMSLKEVK---------ECVEKGYR 215
Query: 211 NDEGTE----LVRLASRCLQSEARERPNAKSLVISLMSLQKE 248
+ + L + C ++E ++RP+ L L+KE
Sbjct: 216 MEPPEGCPADVYVLMTSCWETEPKKRPSFHKLR---EKLEKE 254
|
Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As a negative regulator of Src kinases, Chk may play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Chk is expressed in brain and hematopoietic cells. Studies in mice reveal that Chk is not functionally redundant with Csk and that it plays an important role as a regulator of immune responses. Chk also plays a role in neural differentiation in a manner independent of Src by enhancing Mapk activation via Ras-mediated signaling. Length = 254 |
| >gnl|CDD|173628 cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases | Back alignment and domain information |
|---|
Score = 63.2 bits (154), Expect = 3e-11
Identities = 55/225 (24%), Positives = 97/225 (43%), Gaps = 35/225 (15%)
Query: 41 NLRSERLANLIGCCYEADER--LLVAEFMPNETLAKHL-FHWETQPMKWAMRLRVALYLA 97
L E + G C + R L+ E++P+ +L +L H + +K L + +
Sbjct: 62 TLDHENIVKYKGVCEKPGGRSLRLIMEYLPSGSLRDYLQRHRDQINLK--RLLLFSSQIC 119
Query: 98 QALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMK--NSRDGKSYSTNLAFTP--- 152
+ ++Y S+ R ++ DL A IL + + ++S FGL K Y +P
Sbjct: 120 KGMDYLGSQ-RYIHRDLAARNILVESEDLVKISDFGLAKVLPEDKDYYYVKEPGESPIFW 178
Query: 153 --PEYMRTGRVTPESVVYSFGTMLLDLLS-GKH--IPPSHALDLI---RSKNFLLLMDSA 204
PE +RT + + S V+SFG L +L + G PP+ L +I + + + +
Sbjct: 179 YAPECLRTSKFSSASDVWSFGVTLYELFTYGDPSQSPPAEFLRMIGIAQGQMIVTRLLEL 238
Query: 205 LEGHFSNDEGTELVR----------LASRCLQSEARERPNAKSLV 239
L+ EG L R L C ++E ++RP+ L+
Sbjct: 239 LK------EGERLPRPPSCPDEVYDLMKLCWEAEPQDRPSFADLI 277
|
Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jaks are also involved in regulating the surface expression of some cytokine receptors. The Jak-STAT pathway is involved in many biological processes including hematopoiesis, immunoregulation, host defense, fertility, lactation, growth, and embryogenesis. Length = 284 |
| >gnl|CDD|133211 cd05080, PTKc_Tyk2_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2 | Back alignment and domain information |
|---|
Score = 60.3 bits (146), Expect = 3e-10
Identities = 54/231 (23%), Positives = 98/231 (42%), Gaps = 23/231 (9%)
Query: 34 EEAKAVGNLRSERLANLIGCCYEADER--LLVAEFMPNETLAKHLFHWETQPMKWAMRLR 91
+E + L E + GCC E + L+ E++P +L +L + A L
Sbjct: 55 KEINILKTLYHENIVKYKGCCSEQGGKGLQLIMEYVPLGSLRDYL---PKHKLNLAQLLL 111
Query: 92 VALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSY------- 144
A + + + Y S+ ++ DL A +L D D ++ FGL K +G Y
Sbjct: 112 FAQQICEGMAYLHSQ-HYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDG 170
Query: 145 STNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLS---GKHIPPSHALDLIRSKNFLL-- 199
+ + + E ++ + + S V+SFG L +LL+ K PP ++I K +
Sbjct: 171 DSPVFWYAVECLKENKFSYASDVWSFGVTLYELLTHCDSKQSPPKKFEEMIGPKQGQMTV 230
Query: 200 -----LMDSALEGHFSNDEGTELVRLASRCLQSEARERPNAKSLVISLMSL 245
L++ + + E+ L C ++EA+ RP +SL+ L +
Sbjct: 231 VRLIELLERGMRLPCPKNCPQEVYILMKNCWETEAKFRPTFRSLIPILKEM 281
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Tyk2 is widely expressed in many tissues. It is involved in signaling via the cytokine receptors IFN-alphabeta, IL-6, IL-10, IL-12, IL-13, and IL-23. It mediates cell surface urokinase receptor (uPAR) signaling and plays a role in modulating vascular smooth muscle cell (VSMC) functional behavior in response to injury. Tyk2 is also important in dendritic cell function and T helper (Th)1 cell differentiation. A homozygous mutation of Tyk2 was found in a patient with hyper-IgE syndrome (HIES), a primary immunodeficiency characterized by recurrent skin abscesses, pneumonia, and elevated serum IgE. This suggests that Tyk2 may play important roles in multiple cytokine signaling involved in innate and adaptive immunity. Length = 283 |
| >gnl|CDD|173629 cd05041, PTKc_Fes_like, Catalytic domain of Fes-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 59.8 bits (145), Expect = 3e-10
Identities = 43/159 (27%), Positives = 74/159 (46%), Gaps = 10/159 (6%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQPMKWAMRLRV 92
L+EA+ + + LIG C + +V E +P +L L + + + L++
Sbjct: 40 LQEAEILKQYDHPNIVKLIGVCVQKQPIYIVMELVPGGSLLTFLRKKKNR-LTVKKLLQM 98
Query: 93 ALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTN----- 147
+L A +EY SK ++ DL A L ++ ++S FG M +G Y+ +
Sbjct: 99 SLDAAAGMEYLESKN-CIHRDLAARNCLVGENNVLKISDFG-MSREEEGGIYTVSDGLKQ 156
Query: 148 --LAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIP 184
+ +T PE + GR T ES V+S+G +L + S P
Sbjct: 157 IPIKWTAPEALNYGRYTSESDVWSYGILLWETFSLGDTP 195
|
Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes and Fer kinases play roles in haematopoiesis, inflammation and immunity, growth factor signaling, cytoskeletal regulation, cell migration and adhesion, and the regulation of cell-cell interactions. Fes and Fer show redundancy in their biological functions. Length = 251 |
| >gnl|CDD|173657 cd05113, PTKc_Btk_Bmx, Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome | Back alignment and domain information |
|---|
Score = 59.5 bits (144), Expect = 5e-10
Identities = 56/229 (24%), Positives = 99/229 (43%), Gaps = 39/229 (17%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPN----ETLAKHLFHWETQPMKWAM 88
+EEAK + L E+L L G C + +V E+M N L +H ++ +
Sbjct: 47 IEEAKVMMKLSHEKLVQLYGVCTKQRPIYIVTEYMSNGCLLNYLREHGKRFQPSQL---- 102
Query: 89 RLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYST-- 146
L + + + + Y SK + ++ DL A L D G ++S FGL + D + S+
Sbjct: 103 -LEMCKDVCEGMAYLESK-QFIHRDLAARNCLVDDQGCVKVSDFGLSRYVLDDEYTSSVG 160
Query: 147 ---NLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDS 203
+ ++PPE + + + +S V++FG ++ ++ S +P + +S
Sbjct: 161 SKFPVRWSPPEVLLYSKFSSKSDVWAFGVLMWEVYSLGKMP------------YERFNNS 208
Query: 204 ALEGHFSNDEGTELVR--LASR--------CLQSEARERPNAKSLVISL 242
S +G L R LAS C +A ERP + L+ S+
Sbjct: 209 ETVEKVS--QGLRLYRPHLASEKVYAIMYSCWHEKAEERPTFQQLLSSI 255
|
Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, Btk contains the Tec homology (TH) domain with proline-rich and zinc-binding regions. Tec kinases are expressed mainly by haematopoietic cells. Btk is expressed in B-cells, and a variety of myeloid cells including mast cells, platelets, neutrophils, and dendrictic cells. It interacts with a variety of partners, from cytosolic proteins to nuclear transcription factors, suggesting a diversity of functions. Stimulation of a diverse array of cell surface receptors, including antigen engagement of the B-cell receptor (BCR), leads to PH-mediated membrane translocation of Btk and subsequent phosphorylation by Src kinase and activation. Btk plays an important role in the life cycle of B-cells including their development, differentiation, proliferation, survival, and apoptosis. Mutations in Btk cause the primary immunodeficiency disease, X-linked agammaglobulinaemia (XLA) in humans. Bmx is primarily expressed in bone marrow and the arterial endothelium, and plays an important role in ischemia-induced angiogenesis. It facilitates arterial growth, capillary formation, vessel maturation, and bone marrow-derived endothelial progenitor cell mobilization. Length = 256 |
| >gnl|CDD|223589 COG0515, SPS1, Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
Score = 57.4 bits (137), Expect = 5e-09
Identities = 64/323 (19%), Positives = 111/323 (34%), Gaps = 31/323 (9%)
Query: 33 LEEAKAVGNLRSE-RLANLIGCCYEADERLLVAEFMPNETLAKHL-FHWETQPMKWAMRL 90
L E + + +L + L + LV E++ +L L P+ + L
Sbjct: 45 LREIQILASLNHPPNIVKLYDFFQDEGSLYLVMEYVDGGSLEDLLKKIGRKGPLSESEAL 104
Query: 91 RVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGN-PRLSSFGLMKNSRDGKSYSTN-- 147
+ + ALEY SKG ++ D+ IL D+DG +L FGL K D S S+
Sbjct: 105 FILAQILSALEYLHSKG-IIHRDIKPENILLDRDGRVVKLIDFGLAKLLPDPGSTSSIPA 163
Query: 148 --------LAFTPPEY---MRTGRVTPESVVYSFGTMLLDLLSGKH--------IPPSHA 188
+ PE + + S ++S G L +LL+G S
Sbjct: 164 LPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNSSATSQT 223
Query: 189 LDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERPNAKSLVISLMSLQKE 248
L +I L S L L + L + + R ++ S + L
Sbjct: 224 LKIILELPTPSL-ASPLSPSNPELISKAASDLLKKLLAKDPKNRLSSSSDLSH--DLLAH 280
Query: 249 AEQVPSYVLLGIQHETAPSTKPLSLTPLGEACSRLDLTAIHEILEGMGYKDDEGIANELS 308
+ S + ++ + + + L S L+ AI DD + EL+
Sbjct: 281 LKLKESDLSDLLKPDDSAPLRLSLPPSLEALISSLNSLAISGSDL---KLDDSNFSKELA 337
Query: 309 FQMWTSQMQETLNSKKHGDTAFR 331
+S + + ++ R
Sbjct: 338 PNGVSSSPHNSSSLLLSTASSKR 360
|
Length = 384 |
| >gnl|CDD|173637 cd05059, PTKc_Tec_like, Catalytic domain of Tec-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 56.3 bits (136), Expect = 5e-09
Identities = 44/159 (27%), Positives = 73/159 (45%), Gaps = 11/159 (6%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQPMKWAMR--L 90
+EEAK + L L L G C + +V E+M N L +L + K L
Sbjct: 47 IEEAKVMMKLSHPNLVQLYGVCTKQRPIFIVTEYMANGCLLNYL---RERKGKLGTEWLL 103
Query: 91 RVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTN--- 147
+ + +A+EY S G ++ DL A L +D ++S FGL + D + S+
Sbjct: 104 DMCSDVCEAMEYLESNG-FIHRDLAARNCLVGEDNVVKVSDFGLARYVLDDQYTSSQGTK 162
Query: 148 --LAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIP 184
+ + PPE R + +S V+SFG ++ ++ S +P
Sbjct: 163 FPVKWAPPEVFDYSRFSSKSDVWSFGVLMWEVFSEGKMP 201
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, some members contain the Tec homology (TH) domain, which contains proline-rich and zinc-binding regions. Tec kinases form the second largest subfamily of nRTKs and are expressed mainly by haematopoietic cells, although Tec and Bmx are also found in endothelial cells. B-cells express Btk and Tec, while T-cells express Itk, Txk, and Tec. Collectively, Tec kinases are expressed in a variety of myeloid cells such as mast cells, platelets, macrophages, and dendritic cells. Each Tec kinase shows a distinct cell-type pattern of expression. The function of Tec kinases in lymphoid cells have been studied extensively. They play important roles in the development, differentiation, maturation, regulation, survival, and function of B-cells and T-cells. Mutations in Btk cause the severe B-cell immunodeficiency, X-linked agammaglobulinaemia (XLA). Length = 256 |
| >gnl|CDD|133213 cd05082, PTKc_Csk, Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase | Back alignment and domain information |
|---|
Score = 55.4 bits (133), Expect = 1e-08
Identities = 42/154 (27%), Positives = 74/154 (48%), Gaps = 3/154 (1%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERL-LVAEFMPNETLAKHLFHWETQPMKWAMRLR 91
L EA + LR L L+G E L +V E+M +L +L + L+
Sbjct: 47 LAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLK 106
Query: 92 VALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYST-NLAF 150
+L + +A+EY + ++ DL A +L +D ++S FGL K + + + +
Sbjct: 107 FSLDVCEAMEYLEANN-FVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKW 165
Query: 151 TPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIP 184
T PE +R + + +S V+SFG +L ++ S +P
Sbjct: 166 TAPEALREKKFSTKSDVWSFGILLWEIYSFGRVP 199
|
Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Csk is expressed in a wide variety of tissues. As a negative regulator of Src, Csk plays a role in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. In addition, Csk also shows Src-independent functions. It is a critical component in G-protein signaling, and plays a role in cytoskeletal reorganization and cell migration. Length = 256 |
| >gnl|CDD|173660 cd05123, STKc_AGC, Catalytic domain of AGC family Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 54.8 bits (133), Expect = 1e-08
Identities = 60/219 (27%), Positives = 90/219 (41%), Gaps = 31/219 (14%)
Query: 32 NLEEAKAVGNLRSER----------LANLIGCCYEADERL-LVAEFMPNETLAKHLFHWE 80
+ + K V + +ER + L ++ +E+L LV E+ P L HL
Sbjct: 30 KIIKRKEVEHTLTERNILSRINHPFIVKLH-YAFQTEEKLYLVLEYAPGGELFSHLSKEG 88
Query: 81 TQPMKWAMRLRVALYLAQ---ALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKN 137
+ A Y A+ ALEY S G +Y DL IL D DG+ +L+ FGL K
Sbjct: 89 RFSEERA-----RFYAAEIVLALEYLHSLG-IIYRDLKPENILLDADGHIKLTDFGLAKE 142
Query: 138 SRDGKSYSTNLAFTP----PEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIR 193
S + TP PE + +S G +L ++L+GK PP +A D R
Sbjct: 143 LSSEGSRTNTFCGTPEYLAPEVLLGKGYGKAVDWWSLGVLLYEMLTGK--PPFYAED--R 198
Query: 194 SKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARER 232
+ + ++ L F E L S LQ + +R
Sbjct: 199 KEIYEKILKDPLR--FPEFLSPEARDLISGLLQKDPTKR 235
|
Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the turn motif. Phosphorylation at the A-loop is required of most AGC kinases, which results in a disorder-to-order transition of the A-loop. The ordered conformation results in the access of substrates and ATP to the active site. A subset of AGC kinases with C-terminal extensions containing the HM also requires phosphorylation at this site. Phosphorylation at the HM allows the C-terminal extension to form an ordered structure that packs into the hydrophobic pocket of the catalytic domain, which then reconfigures the kinase into an active bi-lobed state. In addition, growth factor-activated AGC kinases such as PKB, p70S6K, RSK, MSK, PKC, and SGK, require phosphorylation at the turn motif (also called tail or zipper site), located N-terminal to the HM at the C-terminal extension. AGC kinases regulate many cellular processes including division, growth, survival, metabolism, motility, and differentiation. Many are implicated in the development of various human diseases. Length = 250 |
| >gnl|CDD|173659 cd05122, PKc_STE, Catalytic domain of STE family Protein Kinases | Back alignment and domain information |
|---|
Score = 54.9 bits (133), Expect = 2e-08
Identities = 50/216 (23%), Positives = 85/216 (39%), Gaps = 20/216 (9%)
Query: 32 NLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQPMKWAMRLR 91
+ E + + + + G + DE +V EF +L K L Q + +
Sbjct: 44 IINEIQILKKCKHPNIVKYYGSYLKKDELWIVMEFCSGGSL-KDLLKSTNQTLTESQIAY 102
Query: 92 VALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGL---MKNSRDGKSYSTNL 148
V L + LEY S G ++ D+ A IL DG +L FGL + +++ +
Sbjct: 103 VCKELLKGLEYLHSNGI-IHRDIKAANILLTSDGEVKLIDFGLSAQLSDTKARNTMVGTP 161
Query: 149 AFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSH------ALDLIRSKNFLLLMD 202
+ PE + ++ ++S G ++L GK PP AL I + L
Sbjct: 162 YWMAPEVINGKPYDYKADIWSLGITAIELAEGK--PPYSELPPMKALFKIATNGPPGL-- 217
Query: 203 SALEGHFSNDEGTELVRLASRCLQSEARERPNAKSL 238
+DE + + +CLQ +RP A+ L
Sbjct: 218 --RNPEKWSDEFKDFL---KKCLQKNPEKRPTAEQL 248
|
Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPKK, which itself is phosphorylated and activated by a MAPKKK. Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAPKKK to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. Other STE family members include p21-activated kinases (PAKs) and class III myosins, among others. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain, which can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, as well as autophosphorylate the C-terminal motor domain. They play an important role in maintaining the structural integrity of photoreceptor cell microvilli. Length = 253 |
| >gnl|CDD|173645 cd05084, PTKc_Fes, Catalytic domain of the Protein Tyrosine Kinase, Fes | Back alignment and domain information |
|---|
Score = 54.6 bits (131), Expect = 2e-08
Identities = 50/213 (23%), Positives = 85/213 (39%), Gaps = 22/213 (10%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQPMKWAMRLRV 92
L+EA+ + + LIG C + +V E + L E +K +++
Sbjct: 41 LQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFL-RTEGPRLKVKELIQM 99
Query: 93 ALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTN----- 147
A +EY SK ++ DL A L + ++S FG+ + DG ST
Sbjct: 100 VENAAAGMEYLESK-HCIHRDLAARNCLVTEKNVLKISDFGMSREEEDGVYASTGGMKQI 158
Query: 148 -LAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIP-----PSHALDLIRSKNFLLLM 201
+ +T PE + GR + ES V+SFG +L + S +P + I L
Sbjct: 159 PVKWTAPEALNYGRYSSESDVWSFGILLWEAFSLGAVPYANLSNQQTREAIEQGVRLPCP 218
Query: 202 DSALEGHFSNDEGTELVRLASRCLQSEARERPN 234
+ + + RL RC + + +RP+
Sbjct: 219 ELCPD---------AVYRLMERCWEYDPGQRPS 242
|
Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular endothelial, epithelial, and neuronal cells. It plays important roles in cell growth and differentiation, angiogenesis, inflammation and immunity, and cytoskeletal regulation. A recent study implicates Fes kinase as a tumor suppressor in colorectal cancer. Length = 252 |
| >gnl|CDD|133216 cd05085, PTKc_Fer, Catalytic domain of the Protein Tyrosine Kinase, Fer | Back alignment and domain information |
|---|
Score = 54.2 bits (130), Expect = 3e-08
Identities = 41/152 (26%), Positives = 68/152 (44%), Gaps = 7/152 (4%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQPMKWAMRLRV 92
L EA+ + + LIG C + +V E +P L + +K ++
Sbjct: 40 LSEARILKQYDHPNIVKLIGVCTQRQPIYIVMELVPGGDFLSFL-RKKKDELKTKQLVKF 98
Query: 93 ALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLA--- 149
AL A + Y SK ++ DL A L ++ ++S FG+ + DG S+ L
Sbjct: 99 ALDAAAGMAYLESKN-CIHRDLAARNCLVGENNVLKISDFGMSRQEDDGIYSSSGLKQIP 157
Query: 150 --FTPPEYMRTGRVTPESVVYSFGTMLLDLLS 179
+T PE + GR + ES V+S+G +L + S
Sbjct: 158 IKWTAPEALNYGRYSSESDVWSYGILLWETFS 189
|
Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-cell interactions mediated by adherens junctions and focal adhesions. Fer kinase also regulates cell cycle progression in malignant cells. Length = 250 |
| >gnl|CDD|173771 cd08529, STKc_FA2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains | Back alignment and domain information |
|---|
Score = 52.9 bits (127), Expect = 7e-08
Identities = 48/214 (22%), Positives = 89/214 (41%), Gaps = 16/214 (7%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQPMKWAMRLRV 92
++EA+ + L S + + + +V E+ N L K L +P+ R
Sbjct: 47 IDEARVLAKLDSSYIIRYYESFLDKGKLNIVMEYAENGDLHKLLKMQRGRPLPEDQVWRF 106
Query: 93 ALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLAFTP 152
+ + L + SK + L+ D+ + + D N ++ G+ K D +++ + TP
Sbjct: 107 FIQILLGLAHLHSK-KILHRDIKSLNLFLDAYDNVKIGDLGVAKLLSDNTNFANTIVGTP 165
Query: 153 ----PEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGH 208
PE +S V++ G +L + +GKH P A N L+ + G
Sbjct: 166 YYLSPELCEDKPYNEKSDVWALGVVLYECCTGKH--PFDA------NNQGALILKIIRGV 217
Query: 209 F---SNDEGTELVRLASRCLQSEARERPNAKSLV 239
F S +L +L +CL + R+RP+ L+
Sbjct: 218 FPPVSQMYSQQLAQLIDQCLTKDYRQRPDTFQLL 251
|
Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cycle progression. No cellular function has yet been ascribed to CNK4. Length = 256 |
| >gnl|CDD|133199 cd05068, PTKc_Frk_like, Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 52.0 bits (125), Expect = 1e-07
Identities = 40/175 (22%), Positives = 81/175 (46%), Gaps = 15/175 (8%)
Query: 17 LKSSVLESSDLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHL 76
LK ++ D L EA+ + LR +L L C + +V E M +L ++L
Sbjct: 38 LKPGTMDPKDF-----LAEAQIMKKLRHPKLIQLYAVCTLEEPIYIVTELMKYGSLLEYL 92
Query: 77 FHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMK 136
+ +K + +A +A + Y ++ ++ DL A +L ++ +++ FGL +
Sbjct: 93 QGGAGRALKLPQLIDMAAQVASGMAYLEAQ-NYIHRDLAARNVLVGENNICKVADFGLAR 151
Query: 137 -------NSRDGKSYSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIP 184
+R+G + + +T PE R + +S V+SFG +L ++++ +P
Sbjct: 152 VIKEDIYEAREGAKFP--IKWTAPEAALYNRFSIKSDVWSFGILLTEIVTYGRMP 204
|
Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Frk, also known as Rak, is specifically expressed in liver, lung, kidney, intestine, mammary glands, and the islets of Langerhans. Rodent homologs were previously referred to as GTK (gastrointestinal tyr kinase), BSK (beta-cell Src-like kinase), or IYK (intestinal tyr kinase). Studies in mice reveal that Frk is not essential for viability. It plays a role in the signaling that leads to cytokine-induced beta-cell death in Type I diabetes. It also regulates beta-cell number during embryogenesis and early in life. Length = 261 |
| >gnl|CDD|173658 cd05114, PTKc_Tec_Rlk, Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase | Back alignment and domain information |
|---|
Score = 51.4 bits (123), Expect = 2e-07
Identities = 41/157 (26%), Positives = 74/157 (47%), Gaps = 7/157 (4%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQPMKWAMRLRV 92
+EEAK + L +L L G C + +V EFM N L +L + + K M L +
Sbjct: 47 IEEAKVMMKLSHPKLVQLYGVCTQQKPLYIVTEFMENGCLLNYLRQRQGKLSK-DMLLSM 105
Query: 93 ALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLA--- 149
+ + +EY ++ DL A L G ++S FG+ + D + S++ A
Sbjct: 106 CQDVCEGMEYLERNS-FIHRDLAARNCLVSSTGVVKVSDFGMTRYVLDDEYTSSSGAKFP 164
Query: 150 --FTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIP 184
++PPE + + +S V+SFG ++ ++ + +P
Sbjct: 165 VKWSPPEVFNFSKYSSKSDVWSFGVLMWEVFTEGKMP 201
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. Instead of PH, Rlk contains an N-terminal cysteine-rich region. In addition to PH, Tec also contains the Tec homology (TH) domain with proline-rich and zinc-binding regions. Tec kinases are expressed mainly by haematopoietic cells. Tec is more widely-expressed than other Tec subfamily kinases. It is found in endothelial cells, both B- and T-cells, and a variety of myeloid cells including mast cells, erythroid cells, platelets, macrophages and neutrophils. Rlk is expressed in T-cells and mast cell lines. Tec and Rlk are both key components of T-cell receptor (TCR) signaling. They are important in TCR-stimulated proliferation, IL-2 production and phopholipase C-gamma1 activation. Length = 256 |
| >gnl|CDD|133180 cd05049, PTKc_Trk, Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases | Back alignment and domain information |
|---|
Score = 51.7 bits (124), Expect = 2e-07
Identities = 43/171 (25%), Positives = 76/171 (44%), Gaps = 30/171 (17%)
Query: 35 EAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHL------------FHWETQ 82
EA+ + N + E + G C E D ++V E+M + L K L
Sbjct: 58 EAELLTNFQHENIVKFYGVCTEGDPPIMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMG 117
Query: 83 PMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGK 142
+ + L++A+ +A + Y +S+ ++ DL L D ++ FG+ SRD
Sbjct: 118 ELTLSQLLQIAVQIASGMVYLASQ-HFVHRDLATRNCLVGYDLVVKIGDFGM---SRD-- 171
Query: 143 SYSTN-----------LAFTPPEYMRTGRVTPESVVYSFGTMLLDLLS-GK 181
Y+T+ + + PPE + + T ES V+SFG +L ++ + GK
Sbjct: 172 VYTTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVVLWEIFTYGK 222
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalytic domain. Trk receptors are mainly expressed in the peripheral and central nervous systems. They play important roles in cell fate determination, neuronal survival and differentiation, as well as in the regulation of synaptic plasticity. Altered expression of Trk receptors is associated with many human diseases. Length = 280 |
| >gnl|CDD|215061 PLN00113, PLN00113, leucine-rich repeat receptor-like protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 52.9 bits (127), Expect = 2e-07
Identities = 56/235 (23%), Positives = 109/235 (46%), Gaps = 28/235 (11%)
Query: 40 GNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQPMKWAMRLRVALYLAQA 99
G L+ + LIG C L+ E++ + L++ L + + W R ++A+ +A+A
Sbjct: 738 GKLQHPNIVKLIGLCRSEKGAYLIHEYIEGKNLSEVL-----RNLSWERRRKIAIGIAKA 792
Query: 100 LEY--CSSKGRALYHDLNAYRILFDKDGNPRL--SSFGLMKNSRDGKSYSTNLAFTPPEY 155
L + C + +L+ +I+ D P L S GL+ D K + ++ A+ PE
Sbjct: 793 LRFLHCRCSPAVVVGNLSPEKIIIDGKDEPHLRLSLPGLL--CTDTKCFISS-AYVAPET 849
Query: 156 MRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHAL-----DLIRSKNFL-------LLMDS 203
T +T +S +Y FG +L++LL+GK P+ A ++ + + +D
Sbjct: 850 RETKDITEKSDIYGFGLILIELLTGKS--PADAEFGVHGSIVEWARYCYSDCHLDMWIDP 907
Query: 204 ALEGHFS--NDEGTELVRLASRCLQSEARERPNAKSLVISLMSLQKEAEQVPSYV 256
++ G S +E E++ LA C ++ RP A ++ +L S + + + +
Sbjct: 908 SIRGDVSVNQNEIVEVMNLALHCTATDPTARPCANDVLKTLESASRSSSSCVTGL 962
|
Length = 968 |
| >gnl|CDD|133200 cd05069, PTKc_Yes, Catalytic domain of the Protein Tyrosine Kinase, Yes | Back alignment and domain information |
|---|
Score = 50.8 bits (121), Expect = 4e-07
Identities = 42/159 (26%), Positives = 76/159 (47%), Gaps = 11/159 (6%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQPMKWAMRLRV 92
L+EA+ + LR ++L L E + +V EFM +L L + + +K + +
Sbjct: 49 LQEAQIMKKLRHDKLVPLYAVVSE-EPIYIVTEFMGKGSLLDFLKEGDGKYLKLPQLVDM 107
Query: 93 ALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMK-------NSRDGKSYS 145
A +A + Y + ++ DL A IL + +++ FGL + +R G +
Sbjct: 108 AAQIADGMAYIE-RMNYIHRDLRAANILVGDNLVCKIADFGLARLIEDNEYTARQGAKFP 166
Query: 146 TNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIP 184
+ +T PE GR T +S V+SFG +L +L++ +P
Sbjct: 167 --IKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVP 203
|
Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. c-Yes kinase is the cellular homolog of the oncogenic protein (v-Yes) encoded by the Yamaguchi 73 and Esh sarcoma viruses. It displays functional overlap with other Src subfamily members, particularly Src. It also shows some unique functions such as binding to occludins, transmembrane proteins that regulate extracellular interactions in tight junctions. Yes also associates with a number of proteins in different cell types that Src does not interact with, like JAK2 and gp130 in pre-adipocytes, and Pyk2 in treated pulmonary vein endothelial cells. Although the biological function of Yes remains unclear, it appears to have a role in regulating cell-cell interactions and vesicle trafficking in polarized cells. Length = 260 |
| >gnl|CDD|173757 cd08217, STKc_Nek2, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2 | Back alignment and domain information |
|---|
Score = 50.7 bits (122), Expect = 4e-07
Identities = 40/160 (25%), Positives = 61/160 (38%), Gaps = 19/160 (11%)
Query: 90 LRVALYLAQALEYC----SSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYS 145
R+ L AL C L+ DL I D + N +L FGL K S++
Sbjct: 108 WRILTQLLLALYECHNRSDPGNTVLHRDLKPANIFLDANNNVKLGDFGLAKILGHDSSFA 167
Query: 146 TNLAFTP----PEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLM 201
TP PE + +S ++S G ++ +L + PP A +N L L
Sbjct: 168 KTYVGTPYYMSPEQLNHMSYDEKSDIWSLGCLIYELCALS--PPFTA------RNQLQLA 219
Query: 202 DSALEGHFSNDEG---TELVRLASRCLQSEARERPNAKSL 238
EG F +EL + L + +RP+ + L
Sbjct: 220 SKIKEGKFRRIPYRYSSELNEVIKSMLNVDPDKRPSTEEL 259
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exit. NIMA is involved in nuclear membrane fission. Vertebrate Nek2 is a cell cycle-regulated STK, localized in centrosomes and kinetochores, that regulates centrosome splitting at the G2/M phase. It also interacts with other mitotic kinases such as Polo-like kinase 1 and may play a role in spindle checkpoint. An increase in the expression of the human NEK2 gene is strongly associated with the progression of non-Hodgkin lymphoma. Length = 265 |
| >gnl|CDD|133202 cd05071, PTKc_Src, Catalytic domain of the Protein Tyrosine Kinase, Src | Back alignment and domain information |
|---|
Score = 50.4 bits (120), Expect = 5e-07
Identities = 50/213 (23%), Positives = 93/213 (43%), Gaps = 15/213 (7%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQPMKWAMRLRV 92
L+EA+ + LR E+L L E + +V E+M +L L + ++ + +
Sbjct: 49 LQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDM 107
Query: 93 ALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMK-------NSRDGKSYS 145
A +A + Y + ++ DL A IL ++ +++ FGL + +R G +
Sbjct: 108 AAQIASGMAYVE-RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFP 166
Query: 146 TNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSAL 205
+ +T PE GR T +S V+SFG +L +L + +P ++ + L ++
Sbjct: 167 --IKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVN----REVLDQVERGY 220
Query: 206 EGHFSNDEGTELVRLASRCLQSEARERPNAKSL 238
+ L L +C + E ERP + L
Sbjct: 221 RMPCPPECPESLHDLMCQCWRKEPEERPTFEYL 253
|
Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Src also play a role in regulating cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Elevated levels of Src kinase activity have been reported in a variety of human cancers. Several inhibitors of Src have been developed as anti-cancer drugs. Src is also implicated in acute inflammatory responses and osteoclast function. Length = 262 |
| >gnl|CDD|133243 cd05112, PTKc_Itk, Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase | Back alignment and domain information |
|---|
Score = 50.3 bits (120), Expect = 6e-07
Identities = 40/159 (25%), Positives = 74/159 (46%), Gaps = 11/159 (6%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQPMKWAMR--L 90
+EEA+ + L +L L G C E LV EFM + L+ +L Q K++ L
Sbjct: 47 IEEAQVMMKLSHPKLVQLYGVCTERSPICLVFEFMEHGCLSDYL---RAQRGKFSQETLL 103
Query: 91 RVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTN--- 147
+ L + + + Y S ++ DL A L ++ ++S FG+ + D + S+
Sbjct: 104 GMCLDVCEGMAYLESSN-VIHRDLAARNCLVGENQVVKVSDFGMTRFVLDDQYTSSTGTK 162
Query: 148 --LAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIP 184
+ ++ PE + + +S V+SFG ++ ++ S P
Sbjct: 163 FPVKWSSPEVFSFSKYSSKSDVWSFGVLMWEVFSEGKTP 201
|
Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, Itk contains the Tec homology (TH) domain containing one proline-rich region and a zinc-binding region. Tec kinases are expressed mainly by haematopoietic cells. Itk is expressed in T-cells and mast cells, and is important in their development and differentiation. Of the three Tec kinases expressed in T-cells, Itk plays the predominant role in T-cell receptor (TCR) signaling. It is activated by phosphorylation upon TCR crosslinking and is involved in the pathway resulting in phospholipase C-gamma1 activation and actin polymerization. It also plays a role in the downstream signaling of the T-cell costimulatory receptor CD28, the T-cell surface receptor CD2, and the chemokine receptor CXCR4. In addition, Itk is crucial for the development of T-helper(Th)2 effector responses. Length = 256 |
| >gnl|CDD|133209 cd05078, PTK_Jak2_Jak3_rpt1, Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3 | Back alignment and domain information |
|---|
Score = 49.8 bits (119), Expect = 7e-07
Identities = 55/218 (25%), Positives = 99/218 (45%), Gaps = 21/218 (9%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHL-FHWETQPMKWAMRLR 91
E A + L + L G C DE ++V E++ +L +L + + W +L
Sbjct: 47 FEAASMMSQLSHKHLVLNYGVCVCGDESIMVQEYVKFGSLDTYLKKNKNLINISW--KLE 104
Query: 92 VALYLAQALEYCSSKGRALYH-DLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYST---- 146
VA LA AL + KG L H ++ A +L ++ + + + +K S G S +
Sbjct: 105 VAKQLAWALHFLEDKG--LTHGNVCAKNVLLIREEDRKTGNPPFIKLSDPGISITVLPKE 162
Query: 147 ----NLAFTPPEYMRTGR-VTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLM 201
+ + PPE + + ++ + +SFGT L ++ SG P S ALD S+ L
Sbjct: 163 ILLERIPWVPPECIENPQNLSLAADKWSFGTTLWEIFSGGDKPLS-ALD---SQKKLQFY 218
Query: 202 DSALEGHFSNDEGTELVRLASRCLQSEARERPNAKSLV 239
+ + + TEL L ++C+ E RP+ ++++
Sbjct: 219 EDRHQ--LPAPKWTELANLINQCMDYEPDFRPSFRAII 254
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak2 is widely expressed in many tissues while Jak3 is expressed only in hematopoietic cells. Jak2 is essential for the signaling of hormone-like cytokines such as growth hormone, erythropoietin, thrombopoietin, and prolactin, as well as some IFNs and cytokines that signal through the IL-3 and gp130 receptors. Jak3 binds the shared receptor subunit common gamma chain and thus, is essential in the signaling of cytokines that use it such as IL-2, IL-4, IL-7, IL-9, IL-15, and IL-21. Disruption of Jak2 in mice results in an embryonic lethal phenotype with multiple defects including erythropoietic and cardiac abnormalities. It is the only Jak gene that results in a lethal phenotype when disrupted in mice. A mutation in the pseudokinase domain of Jak2, V617F, is present in many myeloproliferative diseases, including almost all patients with polycythemia vera, and 50% of patients with essential thrombocytosis and myelofibrosis. Jak3 is important in lymphoid development and myeloid cell differentiation. Inactivating mutations in Jak3 have been reported in humans with severe combined immunodeficiency (SCID). Length = 258 |
| >gnl|CDD|173681 cd05590, STKc_nPKC_eta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta | Back alignment and domain information |
|---|
Score = 49.9 bits (119), Expect = 9e-07
Identities = 49/176 (27%), Positives = 81/176 (46%), Gaps = 19/176 (10%)
Query: 18 KSSVLESSDLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLL-VAEFMPNETLAKHL 76
K +L+ D+ T+ E + + R+ + CC++ +RL V EF+ L +
Sbjct: 30 KDVILQDDDVECTMT--EKRILSLARNHPFLTQLYCCFQTPDRLFFVMEFVNGGDL---M 84
Query: 77 FHWETQPMKWAMRLRVALYLAQ---ALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFG 133
FH Q + R Y A+ AL + KG +Y DL +L D +G+ +L+ FG
Sbjct: 85 FH--IQKSRRFDEARARFYAAEITSALMFLHDKG-IIYRDLKLDNVLLDHEGHCKLADFG 141
Query: 134 LMKNS-RDGKSYSTNLAFTP----PEYMRTGRVTPESVVYSFGTMLLDLLSGKHIP 184
+ K +GK+ ST TP PE ++ P ++ G +L ++L G H P
Sbjct: 142 MCKEGIFNGKTTST-FCGTPDYIAPEILQEMLYGPSVDWWAMGVLLYEMLCG-HAP 195
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signaling of cell-type specific differentiation. It is also expressed in pro-B cells and early-stage thymocytes, and acts as a key regulator in early B-cell development. PKC-eta increases glioblastoma multiforme (GBM) proliferation and resistance to radiation, and is being developed as a therapeutic target for the management of GBM. Length = 320 |
| >gnl|CDD|132963 cd06632, STKc_MEKK1_plant, Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1 | Back alignment and domain information |
|---|
Score = 49.0 bits (117), Expect = 1e-06
Identities = 55/221 (24%), Positives = 92/221 (41%), Gaps = 35/221 (15%)
Query: 34 EEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHL--FHWETQPMKWAMRLR 91
+E + L+ + +G E D + E +P +LAK L + +P+
Sbjct: 51 QEIALLSKLQHPNIVQYLGTEREEDNLYIFLELVPGGSLAKLLKKYGSFPEPV------- 103
Query: 92 VALYLAQ---ALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNS---RDGKSYS 145
+ LY Q LEY + ++ D+ IL D +G +L+ FG+ K KS+
Sbjct: 104 IRLYTRQILLGLEYLHDRN-TVHRDIKGANILVDTNGVVKLADFGMAKQVVEFSFAKSFK 162
Query: 146 TNLAFTPPEY-MRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLI-------RSKNF 197
+ + PE + G + ++S G +L++ +GK PP L+ + RSK
Sbjct: 163 GSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMATGK--PPWSQLEGVAAVFKIGRSKEL 220
Query: 198 LLLMDSALEGHFSNDEGTELVRLASRCLQSEARERPNAKSL 238
+ D H S DE + + CLQ + RP A L
Sbjct: 221 PPIPD-----HLS-DEAKDFILK---CLQRDPSLRPTAAEL 252
|
Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidopsis thaliana MEKK1 activates MPK4, a MAPK that regulates systemic acquired resistance. MEKK1 also participates in the regulation of temperature-sensitive and tissue-specific cell death. Length = 258 |
| >gnl|CDD|133201 cd05070, PTKc_Fyn_Yrk, Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk | Back alignment and domain information |
|---|
Score = 48.8 bits (116), Expect = 1e-06
Identities = 42/159 (26%), Positives = 75/159 (47%), Gaps = 11/159 (6%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQPMKWAMRLRV 92
LEEA+ + LR ++L L E + +V E+M +L L E + +K + +
Sbjct: 49 LEEAQIMKKLRHDKLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLKDGEGRALKLPNLVDM 107
Query: 93 ALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMK-------NSRDGKSYS 145
A +A + Y + ++ DL + IL +++ FGL + +R G +
Sbjct: 108 AAQVAAGMAYIE-RMNYIHRDLRSANILVGDGLVCKIADFGLARLIEDNEYTARQGAKFP 166
Query: 146 TNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIP 184
+ +T PE GR T +S V+SFG +L +L++ +P
Sbjct: 167 --IKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVP 203
|
Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Fyn, together with Lck, plays a critical role in T-cell signal transduction by phosphorylating ITAM (immunoreceptor tyr activation motif) sequences on T-cell receptors, ultimately leading to the proliferation and differentiation of T-cells. In addition, Fyn is involved in the myelination of neurons, and is implicated in Alzheimer's and Parkinson's diseases. Yrk has been detected only in chickens. It is primarily found in neuronal and epithelial cells and in macrophages. It may play a role in inflammation and in response to injury. Length = 260 |
| >gnl|CDD|173670 cd05579, STKc_MAST_like, Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins | Back alignment and domain information |
|---|
Score = 48.8 bits (117), Expect = 2e-06
Identities = 40/147 (27%), Positives = 62/147 (42%), Gaps = 33/147 (22%)
Query: 62 LVAEFMPNETLAKHLFHWETQPMKWAMRLRVALYLAQ---ALEYCSSKGRALYHDLNAYR 118
LV E++P LA L + + A +Y+A+ ALEY S G ++ DL
Sbjct: 70 LVMEYLPGGDLASLLENVGSLDEDVA-----RIYIAEIVLALEYLHSNG-IIHRDLKPDN 123
Query: 119 ILFDKDGNPRLSSFGLMK-------NSRDGKSYSTNLAFTPPEYMRTGRVTPESVV---- 167
IL D +G+ +L+ FGL K + + P+Y+ PE ++
Sbjct: 124 ILIDSNGHLKLTDFGLSKVGLVRRQINLNDDEKEDKRIVGTPDYI-----APEVILGQGH 178
Query: 168 ------YSFGTMLLDLLSGKHIPPSHA 188
+S G +L + L G IPP H
Sbjct: 179 SKTVDWWSLGCILYEFLVG--IPPFHG 203
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert relative to other kinases. The fungal kinases in this subfamily harbor other domains in addition to a central catalytic domain, which also contains an insert relative to MAST kinases like MASTL. Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. MAST kinases are cytoskeletal associated kinases of unknown function that are also expressed at neuromuscular junctions and postsynaptic densities. The fungal proteins Rim15 and cek1 are involved in the regulation of meiosis and mitosis, respectively. Length = 265 |
| >gnl|CDD|133165 cd05033, PTKc_EphR, Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 48.5 bits (116), Expect = 2e-06
Identities = 37/153 (24%), Positives = 73/153 (47%), Gaps = 8/153 (5%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQPMKWAMRLRV 92
L EA +G + L G ++ +++ E+M N +L K L + + + +
Sbjct: 53 LTEASIMGQFDHPNIIRLEGVVTKSRPVMIITEYMENGSLDKFLRENDGK-FTVGQLVGM 111
Query: 93 ALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKS-YSTN---- 147
+A ++Y S ++ DL A IL + + ++S FGL + D ++ Y+T
Sbjct: 112 LRGIASGMKYLSEMN-YVHRDLAARNILVNSNLVCKVSDFGLSRRLEDSEATYTTKGGKI 170
Query: 148 -LAFTPPEYMRTGRVTPESVVYSFGTMLLDLLS 179
+ +T PE + + T S V+SFG ++ +++S
Sbjct: 171 PIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMS 203
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. This allows ephrin/EphR dimers to form, leading to the activation of the intracellular tyr kinase domain. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). The main effect of ephrin/EphR interaction is cell-cell repulsion or adhesion. Ephrin/EphR signaling is important in neural development and plasticity, cell morphogenesis and proliferation, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. Length = 266 |
| >gnl|CDD|133248 cd05148, PTKc_Srm_Brk, Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk | Back alignment and domain information |
|---|
Score = 48.6 bits (116), Expect = 2e-06
Identities = 47/213 (22%), Positives = 93/213 (43%), Gaps = 19/213 (8%)
Query: 35 EAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQPMKWAMRLRVAL 94
E +A+ LR + L +L C + ++ E M +L L E Q + A + +A
Sbjct: 52 EVQALKRLRHKHLISLFAVCSVGEPVYIITELMEKGSLLAFLRSPEGQVLPVASLIDMAC 111
Query: 95 YLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG--KSYSTNLAF-- 150
+A+ + Y + +++ DL A IL +D +++ FGL + ++ S + +
Sbjct: 112 QVAEGMAYLEEQ-NSIHRDLAARNILVGEDLVCKVADFGLARLIKEDVYLSSDKKIPYKW 170
Query: 151 TPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIP-----PSHALDLIRSKNFLLLMDSAL 205
T PE G + +S V+SFG +L ++ + +P D I + + + +
Sbjct: 171 TAPEAASHGTFSTKSDVWSFGILLYEMFTYGQVPYPGMNNHEVYDQI-TAGYRMPCPAKC 229
Query: 206 EGHFSNDEGTELVRLASRCLQSEARERPNAKSL 238
E+ ++ C +E +RP+ K+L
Sbjct: 230 P--------QEIYKIMLECWAAEPEDRPSFKAL 254
|
Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Srm and Brk however, lack the N-terminal myristylation sites. Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Brk has been found to be overexpressed in a majority of breast tumors. Length = 261 |
| >gnl|CDD|173641 cd05072, PTKc_Lyn, Catalytic domain of the Protein Tyrosine Kinase, Lyn | Back alignment and domain information |
|---|
Score = 48.1 bits (114), Expect = 3e-06
Identities = 37/159 (23%), Positives = 74/159 (46%), Gaps = 10/159 (6%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQPMKWAMRLRV 92
LEEA + L+ ++L L + + ++ E+M +L L E + +
Sbjct: 49 LEEANLMKTLQHDKLVRLYAVVTKEEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDF 108
Query: 93 ALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMK-------NSRDGKSYS 145
+ +A+ + Y K ++ DL A +L + +++ FGL + +R+G +
Sbjct: 109 SAQIAEGMAYIERKNY-IHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFP 167
Query: 146 TNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIP 184
+ +T PE + G T +S V+SFG +L ++++ IP
Sbjct: 168 --IKWTAPEAINFGSFTIKSDVWSFGILLYEIVTYGKIP 204
|
Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Lyn is expressed in B lymphocytes and myeloid cells. It exhibits both positive and negative regulatory roles in B cell receptor (BCR) signaling. Lyn, as well as Fyn and Blk, promotes B cell activation by phosphorylating ITAMs (immunoreceptor tyr activation motifs) in CD19 and in Ig components of BCR. It negatively regulates signaling by its unique ability to phosphorylate ITIMs (immunoreceptor tyr inhibition motifs) in cell surface receptors like CD22 and CD5. Lyn also plays an important role in G-CSF receptor signaling by phosphorylating a variety of adaptor molecules. Length = 261 |
| >gnl|CDD|173626 cd05034, PTKc_Src_like, Catalytic domain of Src kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 48.1 bits (115), Expect = 3e-06
Identities = 42/159 (26%), Positives = 81/159 (50%), Gaps = 10/159 (6%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQPMKWAMRLRV 92
L+EA+ + LR ++L L C E + +V E+M +L L E + ++ + +
Sbjct: 49 LQEAQIMKKLRHDKLVQLYAVCSEEEPIYIVTEYMSKGSLLDFLKSGEGKKLRLPQLVDM 108
Query: 93 ALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMK-------NSRDGKSYS 145
A +A+ + Y S+ ++ DL A IL ++ +++ FGL + +R+G +
Sbjct: 109 AAQIAEGMAYLESR-NYIHRDLAARNILVGENLVCKIADFGLARLIEDDEYTAREGAKFP 167
Query: 146 TNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIP 184
+ +T PE GR T +S V+SFG +L ++++ +P
Sbjct: 168 --IKWTAPEAANYGRFTIKSDVWSFGILLTEIVTYGRVP 204
|
Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. They were identified as the first proto-oncogene products, and they regulate cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Src kinases are overexpressed in a variety of human cancers, making them attractive targets for therapy. They are also implicated in acute inflammatory responses and osteoclast function. Src, Fyn, Yes, and Yrk are widely expressed, while Blk, Lck, Hck, Fgr, and Lyn show a limited expression pattern. Length = 261 |
| >gnl|CDD|173649 cd05093, PTKc_TrkB, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B | Back alignment and domain information |
|---|
Score = 47.8 bits (113), Expect = 4e-06
Identities = 63/248 (25%), Positives = 105/248 (42%), Gaps = 43/248 (17%)
Query: 35 EAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHL--------FHWETQP--- 83
EA+ + NL+ E + G C E D ++V E+M + L K L E
Sbjct: 57 EAELLTNLQHEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAE 116
Query: 84 MKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKS 143
+ + L +A +A + Y +S+ ++ DL L ++ ++ FG+ SRD
Sbjct: 117 LTQSQMLHIAQQIAAGMVYLASQ-HFVHRDLATRNCLVGENLLVKIGDFGM---SRD--V 170
Query: 144 YSTN-----------LAFTPPEYMRTGRVTPESVVYSFGTMLLDLLS-GKHIPPSHALDL 191
YST+ + + PPE + + T ES V+S G +L ++ + GK P + L
Sbjct: 171 YSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQ--PWYQL-- 226
Query: 192 IRSKNFLLLMDSALEGHFSNDEGT---ELVRLASRCLQSEARERPNAKSLVISLMSLQKE 248
S N ++ + +G T E+ L C Q E R N K + L +L K
Sbjct: 227 --SNNEVI--ECITQGRVLQRPRTCPKEVYDLMLGCWQREPHMRLNIKEIHSLLQNLAKA 282
Query: 249 AEQVPSYV 256
+ P Y+
Sbjct: 283 S---PVYL 287
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly expressed in the nervous system and in some non-neural tissues. It plays important roles in cell proliferation, differentiation, and survival. BDNF/Trk signaling plays a key role in regulating activity-dependent synaptic plasticity. TrkB also contributes to protection against gp120-induced neuronal cell death. TrkB overexpression is associated with poor prognosis in neuroblastoma (NB) and other human cancers. It acts as a suppressor of anoikis (detachment-induced apoptosis) and contributes to tumor metastasis. Length = 288 |
| >gnl|CDD|133168 cd05036, PTKc_ALK_LTK, Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase | Back alignment and domain information |
|---|
Score = 47.4 bits (113), Expect = 5e-06
Identities = 47/224 (20%), Positives = 88/224 (39%), Gaps = 25/224 (11%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWE---TQPMKWAMR 89
L EA + + + LIG +E R ++ E M L L +P M+
Sbjct: 57 LMEALIMSKFNHQNIVRLIGVSFERLPRFILLELMAGGDLKSFLRENRPRPERPSSLTMK 116
Query: 90 --LRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPR---LSSFGLMKNSRDGKSY 144
L A +A+ +Y ++ D+ A L G R ++ FG+ ++ Y
Sbjct: 117 DLLFCARDVAKGCKYLEEN-HFIHRDIAARNCLLTCKGPGRVAKIADFGMARDIYRASYY 175
Query: 145 STN------LAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIP-PSHALDLIRSKNF 197
+ + PPE G T ++ V+SFG +L ++ S ++P P ++
Sbjct: 176 RKGGRAMLPIKWMPPEAFLDGIFTSKTDVWSFGVLLWEIFSLGYMPYPGR-----TNQEV 230
Query: 198 LLLMDSALEGHFSNDEG--TELVRLASRCLQSEARERPNAKSLV 239
+ + G +G + R+ + C Q +RPN +++
Sbjct: 231 MEFVTGG--GRLDPPKGCPGPVYRIMTDCWQHTPEDRPNFATIL 272
|
Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well as visceral muscle differentiation in Drosophila. ALK is aberrantly expressed as fusion proteins, due to chromosomal translocations, in about 60% of anaplastic large cell lymphomas (ALCLs). ALK fusion proteins are also found in rare cases of diffuse large B cell lymphomas (DLBCLs). LTK is mainly expressed in B lymphocytes and neuronal tissues. It is important in cell proliferation and survival. Transgenic mice expressing TLK display retarded growth and high mortality rate. In addition, a polymorphism in mouse and human LTK is implicated in the pathogenesis of systemic lupus erythematosus. Length = 277 |
| >gnl|CDD|173726 cd06610, STKc_OSR1_SPAK, Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase | Back alignment and domain information |
|---|
Score = 47.0 bits (112), Expect = 7e-06
Identities = 39/154 (25%), Positives = 62/154 (40%), Gaps = 18/154 (11%)
Query: 98 QALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFG----LMKNSRDGKSYSTNLAFTP- 152
+ LEY S G+ ++ D+ A IL +DG+ +++ FG L + TP
Sbjct: 113 KGLEYLHSNGQ-IHRDIKAGNILLGEDGSVKIADFGVSASLADGGDRTRKVRKTFVGTPC 171
Query: 153 ---PEYMRTGRVTPESV-VYSFGTMLLDLLSGK----HIPPSHALDLIRSKNFLLLMDSA 204
PE M ++SFG ++L +G PP L L + L A
Sbjct: 172 WMAPEVMEQVHGYDFKADIWSFGITAIELATGAAPYSKYPPMKVLMLTLQNDPPSLETGA 231
Query: 205 LEGHFSNDEGTELVRLASRCLQSEARERPNAKSL 238
+S ++ S CLQ + +RP A+ L
Sbjct: 232 DYKKYSK----SFRKMISLCLQKDPSKRPTAEEL 261
|
Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1 and SPAK contain a conserved C-terminal (CCT) domain, which recognizes a unique motif ([RK]FX[VI]) present in their activating kinases (WNK1/WNK4) and their substrates. Length = 267 |
| >gnl|CDD|132985 cd06654, STKc_PAK1, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1 | Back alignment and domain information |
|---|
Score = 47.0 bits (111), Expect = 7e-06
Identities = 47/186 (25%), Positives = 80/186 (43%), Gaps = 34/186 (18%)
Query: 98 QALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLAFTP----P 153
QALE+ S + ++ D+ + IL DG+ +L+ FG +S + + TP P
Sbjct: 127 QALEFLHSN-QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAP 185
Query: 154 EYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDE 213
E + P+ ++S G M ++++ G+ PP + +R+ L L+ + N E
Sbjct: 186 EVVTRKAYGPKVDIWSLGIMAIEMIEGE--PPYLNENPLRA---LYLIATNGTPELQNPE 240
Query: 214 GTELV--RLASRCLQSEARERPNAKSLVISLMSLQKEAEQVPSYVLLGIQHETAPSTKPL 271
+ +RCL + +R +AK L +QH+ KPL
Sbjct: 241 KLSAIFRDFLNRCLDMDVEKRGSAKEL---------------------LQHQFLKIAKPL 279
Query: 272 -SLTPL 276
SLTPL
Sbjct: 280 SSLTPL 285
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK1 is important in the regulation of many cellular processes including cytoskeletal dynamics, cell motility, growth, and proliferation. Although PAK1 has been regarded mainly as a cytosolic protein, recent reports indicate that PAK1 also exists in significant amounts in the nucleus, where it is involved in transcription modulation and in cell cycle regulatory events. PAK1 is also involved in transformation and tumorigenesis. Its overexpression, hyperactivation and increased nuclear accumulation is correlated to breast cancer invasiveness and progression. Nuclear accumulation is also linked to tamoxifen resistance in breast cancer cells. Length = 296 |
| >gnl|CDD|173633 cd05052, PTKc_Abl, Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase | Back alignment and domain information |
|---|
Score = 46.8 bits (111), Expect = 7e-06
Identities = 49/214 (22%), Positives = 95/214 (44%), Gaps = 16/214 (7%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQPMKWAMRLRV 92
L+EA + ++ L L+G C ++ EFM L +L Q + + L +
Sbjct: 50 LKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYM 109
Query: 93 ALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTN----- 147
A ++ A+EY K ++ DL A L ++ +++ FGL + G +Y+ +
Sbjct: 110 ATQISSAMEYLEKK-NFIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAHAGAKF 167
Query: 148 -LAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALE 206
+ +T PE + + + +S V++FG +L ++ + + P +DL + LL +E
Sbjct: 168 PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT-YGMSPYPGIDLSQVYE-LLEKGYRME 225
Query: 207 GHFSNDEG--TELVRLASRCLQSEARERPNAKSL 238
EG ++ L C Q +RP+ +
Sbjct: 226 R----PEGCPPKVYELMRACWQWNPSDRPSFAEI 255
|
Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays a role in cell proliferation and survival. In response to DNA damage or oxidative stress, Abl is transported to the nucleus where it induces apoptosis. In chronic myelogenous leukemia (CML) patients, an aberrant translocation results in the replacement of the first exon of Abl with the BCR (breakpoint cluster region) gene. The resulting BCR-Abl fusion protein is constitutively active and associates into tetramers, resulting in a hyperactive kinase sending a continuous signal. This leads to uncontrolled proliferation, morphological transformation and anti-apoptotic effects. BCR-Abl is the target of selective inhibitors, such as imatinib (Gleevec), used in the treatment of CML. Abl2, also known as ARG (Abelson-related gene), is thought to play a cooperative role with Abl in the proper development of the nervous system. The Tel-ARG fusion protein, resulting from reciprocal translocation between chromosomes 1 and 12, is associated with acute myeloid leukemia (AML). The TEL gene is a frequent fusion partner of other tyr kinase oncogenes, including Tel/Abl, Tel/PDGFRbeta, and Tel/Jak2, found in patients with leukemia and myeloproliferative disorders. Length = 263 |
| >gnl|CDD|173709 cd05619, STKc_nPKC_theta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta | Back alignment and domain information |
|---|
Score = 47.3 bits (112), Expect = 7e-06
Identities = 41/146 (28%), Positives = 69/146 (47%), Gaps = 16/146 (10%)
Query: 53 CCYEADERLL-VAEFMPNETLAKHLFHWETQPMKWAMRLRVALYLAQ---ALEYCSSKGR 108
C ++ E L V E++ L +FH ++ K+ + R Y A+ L++ SKG
Sbjct: 63 CTFQTKENLFFVMEYLNGGDL---MFHIQS-CHKFDLP-RATFYAAEIICGLQFLHSKG- 116
Query: 109 ALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLAFTP----PEYMRTGRVTPE 164
+Y DL IL D DG+ +++ FG+ K + G + + TP PE + +
Sbjct: 117 IVYRDLKLDNILLDTDGHIKIADFGMCKENMLGDAKTCTFCGTPDYIAPEILLGQKYNTS 176
Query: 165 SVVYSFGTMLLDLLSGKHIPPSHALD 190
+SFG +L ++L G+ P H D
Sbjct: 177 VDWWSFGVLLYEMLIGQ--SPFHGHD 200
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in several aspects of T-cell biology. Although T-cells also express other PKC isoforms, PKC-theta is unique in that upon antigen stimulation, it is translocated to the plasma membrane at the immunological synapse, where it mediates signals essential for T-cell activation. It is essential for TCR-induced proliferation, cytokine production, T-cell survival, and the differentiation and effector function of T-helper (Th) cells, particularly Th2 and Th17. PKC-theta is being developed as a therapeutic target for Th2-mediated allergic inflammation and Th17-mediated autoimmune diseases. Length = 316 |
| >gnl|CDD|133227 cd05096, PTKc_DDR1, Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1 | Back alignment and domain information |
|---|
Score = 47.2 bits (112), Expect = 7e-06
Identities = 54/239 (22%), Positives = 96/239 (40%), Gaps = 50/239 (20%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMP----NETLAKHLFHWETQP----- 83
L+E K + L+ + L+G C + D ++ E+M N+ L+ H + +
Sbjct: 67 LKEVKILSRLKDPNIIRLLGVCVDEDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAV 126
Query: 84 --------MKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLM 135
+ ++ L VAL +A ++Y SS ++ DL L ++ +++ FG+
Sbjct: 127 PPAHCLPAISYSSLLHVALQIASGMKYLSSLN-FVHRDLATRNCLVGENLTIKIADFGMS 185
Query: 136 KNSRDGKSYSTN-LAFTPPEYMR-----TGRVTPESVVYSFGTMLLDLLSGKHIPPSHAL 189
+N G Y A P +M G+ T S V++FG L ++L
Sbjct: 186 RNLYAGDYYRIQGRAVLPIRWMAWECILMGKFTTASDVWAFGVTLWEILM---------- 235
Query: 190 DLIRSKNFLLLMDSAL---EGHFSNDEGTE------------LVRLASRCLQSEARERP 233
L + + + L D + G F D+G + L L +C + RERP
Sbjct: 236 -LCKEQPYGELTDEQVIENAGEFFRDQGRQVYLFRPPPCPQGLYELMLQCWSRDCRERP 293
|
Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in keratinocytes, colonic mucosa epithelium, lung epithelium, thyroid follicles, and the islets of Langerhans. During embryonic development, it is found in the developing neuroectoderm. DDR1 is a key regulator of cell morphogenesis, differentiation and proliferation. It is important in the development of the mammary gland, the vasculator and the kidney. DDR1 is also found in human leukocytes, where it facilitates cell adhesion, migration, maturation, and cytokine production. Length = 304 |
| >gnl|CDD|173731 cd06627, STKc_Cdc7_like, Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 46.9 bits (112), Expect = 7e-06
Identities = 50/205 (24%), Positives = 84/205 (40%), Gaps = 18/205 (8%)
Query: 41 NLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQPMKWAMRLRVALYLAQ-- 98
NL+ + IG +D ++ E+ N +L + + + P VA+Y+ Q
Sbjct: 55 NLKHPNIVKYIGSIETSDSLYIILEYAENGSLRQIIKKFGPFP-----ESLVAVYVYQVL 109
Query: 99 -ALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLAFTP----P 153
L Y +G ++ D+ A IL KDG +L+ FG+ D ++ TP P
Sbjct: 110 QGLAYLHEQG-VIHRDIKAANILTTKDGVVKLADFGVATKLNDVSKDDASVVGTPYWMAP 168
Query: 154 EYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDE 213
E + + S ++S G +++LL+G PP + L+ L +
Sbjct: 169 EVIEMSGASTASDIWSLGCTVIELLTGN--PPYYDLN---PMAALFRIVQDDHPPLPEGI 223
Query: 214 GTELVRLASRCLQSEARERPNAKSL 238
EL +C Q + RP AK L
Sbjct: 224 SPELKDFLMQCFQKDPNLRPTAKQL 248
|
Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Cdc7 is essential for cell division by playing a key role in the initiation of septum formation and cytokinesis. Budding yeast Cdc15 functions to coordinate mitotic exit with cytokinesis. Arabidopsis MAPKKK epsilon is required for pollen development in the plasma membrane. Length = 254 |
| >gnl|CDD|132988 cd06657, STKc_PAK4, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4 | Back alignment and domain information |
|---|
Score = 46.9 bits (111), Expect = 9e-06
Identities = 38/145 (26%), Positives = 64/145 (44%), Gaps = 12/145 (8%)
Query: 57 ADERLLVAEFMPNETLAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNA 116
DE +V EF+ L + H + A V L + +AL ++G ++ D+ +
Sbjct: 89 GDELWVVMEFLEGGALTDIVTHTRMNEEQIAA---VCLAVLKALSVLHAQG-VIHRDIKS 144
Query: 117 YRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLAFTP----PEYMRTGRVTPESVVYSFGT 172
IL DG +LS FG +L TP PE + PE ++S G
Sbjct: 145 DSILLTHDGRVKLSDFGFCAQVSKEVPRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGI 204
Query: 173 MLLDLLSGK----HIPPSHALDLIR 193
M+++++ G+ + PP A+ +IR
Sbjct: 205 MVIEMVDGEPPYFNEPPLKAMKMIR 229
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell morphology and cytoskeletal organization. It is essential for embryonic viability and proper neural development. Mice lacking PAK4 die due to defects in the fetal heart. In addition, their spinal cord motor neurons showed failure to differentiate and migrate. PAK4 also plays a role in cell survival and tumorigenesis. It is overexpressed in many primary tumors including colon, esophageal, and mammary tumors. PAK4 has also been implicated in viral and bacterial infection pathways. Length = 292 |
| >gnl|CDD|173640 cd05067, PTKc_Lck_Blk, Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk | Back alignment and domain information |
|---|
Score = 46.8 bits (111), Expect = 9e-06
Identities = 39/159 (24%), Positives = 74/159 (46%), Gaps = 11/159 (6%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQPMKWAMRLRV 92
L EA + L+ RL L + + ++ E+M N +L L E + + +
Sbjct: 49 LAEANLMKQLQHPRLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTPEGIKLTINKLIDM 107
Query: 93 ALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMK-------NSRDGKSYS 145
A +A+ + + K ++ DL A IL + +++ FGL + +R+G +
Sbjct: 108 AAQIAEGMAFIERKN-YIHRDLRAANILVSETLCCKIADFGLARLIEDNEYTAREGAKFP 166
Query: 146 TNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIP 184
+ +T PE + G T +S V+SFG +L ++++ IP
Sbjct: 167 --IKWTAPEAINYGTFTIKSDVWSFGILLTEIVTYGRIP 203
|
Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Lck is expressed in T-cells and natural killer (NK) cells. It plays a critical role in T-cell maturation, activation, and T-cell receptor (TCR) signaling. Lck phosphorylates ITAM (immunoreceptor tyr activation motif) sequences on several subunits of TCRs, leading to the activation of different second messenger cascades. Phosphorylated ITAMs serve as binding sites for other signaling factor such as Syk and ZAP-70, leading to their activation and propagation of downstream events. In addition, Lck regulates drug-induced apoptosis by interfering with the mitochondrial death pathway. The apototic role of Lck is independent of its primary function in T-cell signaling. Blk is expressed specifically in B-cells. It is involved in pre-BCR (B-cell receptor) signaling. Length = 260 |
| >gnl|CDD|173642 cd05075, PTKc_Axl, Catalytic domain of the Protein Tyrosine Kinase, Axl | Back alignment and domain information |
|---|
Score = 46.2 bits (109), Expect = 1e-05
Identities = 55/227 (24%), Positives = 94/227 (41%), Gaps = 31/227 (13%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADER------LLVAEFMPNETLAKHLFHWE--TQPM 84
L EA + + LIG C + E +++ FM + L L + P
Sbjct: 48 LSEAVCMKEFDHPNVMRLIGVCLQTVESEGYPSPVVILPFMKHGDLHSFLLYSRLGDCPQ 107
Query: 85 KWAMRLRVALY--LAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGK 142
++ V +A +EY SSK ++ DL A + +++ N ++ FGL K +G
Sbjct: 108 YLPTQMLVKFMTDIASGMEYLSSK-SFIHRDLAARNCMLNENMNVCVADFGLSKKIYNGD 166
Query: 143 SYSTN-LAFTPPEYMR----TGRV-TPESVVYSFGTMLLDLLSGKHIP-----PSHALDL 191
Y +A P +++ RV T +S V+SFG + ++ + P S D
Sbjct: 167 YYRQGRIAKMPVKWIAIESLADRVYTTKSDVWSFGVTMWEIATRGQTPYPGVENSEIYDY 226
Query: 192 IRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERPNAKSL 238
+R N L L+G +S L S C ++RP+ ++L
Sbjct: 227 LRQGNRLKQPPDCLDGLYS---------LMSSCWLLNPKDRPSFETL 264
|
Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transformed cells. Axl signaling is important in many cellular functions such as survival, anti-apoptosis, proliferation, migration, and adhesion. Axl was originally isolated from patients with chronic myelogenous leukemia and a chronic myeloproliferative disorder. Axl is overexpressed in many human cancers including colon, squamous cell, thyroid, breast, and lung carcinomas. Length = 272 |
| >gnl|CDD|173668 cd05577, STKc_GRK, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase | Back alignment and domain information |
|---|
Score = 46.0 bits (109), Expect = 1e-05
Identities = 39/160 (24%), Positives = 66/160 (41%), Gaps = 10/160 (6%)
Query: 28 GETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQPMKWA 87
GE + L E K + + S + +L D+ LV M L H+++ A
Sbjct: 36 GEQMALNEKKILEKVSSRFIVSLAYAFETKDDLCLVMTLMNGGDLKYHIYNVGEPGFPEA 95
Query: 88 MRLRVALYLAQ---ALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGL---MKNSRDG 141
R Y AQ LE+ + R +Y DL +L D GN R+S GL +K +
Sbjct: 96 ---RAIFYAAQIICGLEHLHQR-RIVYRDLKPENVLLDDHGNVRISDLGLAVELKGGKKI 151
Query: 142 KSYSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGK 181
K + + PE ++ ++ G L ++++G+
Sbjct: 152 KGRAGTPGYMAPEVLQGEVYDFSVDWFALGCTLYEMIAGR 191
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of G protein signaling) homology (RH) domain and several motifs. The C-terminus diverges among different groups of GRKs. There are seven types of GRKs, named GRK1 to GRK7. They are subdivided into three main groups: visual (GRK1/7); beta-adrenergic receptor kinases (GRK2/3); and GRK4-like (GRK4/5/6). Expression of GRK2/3/5/6 is widespread while GRK1/4/7 show a limited tissue distribution. The substrate spectrum of the widely expressed GRKs partially overlaps. GRKs play important roles in the cardiovascular, immune, respiratory, skeletal, and nervous systems. Length = 277 |
| >gnl|CDD|133179 cd05048, PTKc_Ror, Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors | Back alignment and domain information |
|---|
Score = 46.3 bits (110), Expect = 1e-05
Identities = 41/171 (23%), Positives = 75/171 (43%), Gaps = 31/171 (18%)
Query: 34 EEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLF-------------HWE 80
+EA+ + +L+ + L+G C + ++ E++ + L + L
Sbjct: 57 QEAELMSDLQHPNIVCLLGVCTKEQPTCMLFEYLAHGDLHEFLVRNSPHSDVGAESGDET 116
Query: 81 TQPMKWAMR-LRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSR 139
+ L +A+ +A +EY SS ++ DL A L + ++S FGL SR
Sbjct: 117 VKSSLDCSDFLHIAIQIAAGMEYLSSH-HFVHRDLAARNCLVGEGLTVKISDFGL---SR 172
Query: 140 DGKSYSTN-----------LAFTPPEYMRTGRVTPESVVYSFGTMLLDLLS 179
D YS + + + PPE + G+ T ES ++SFG +L ++ S
Sbjct: 173 DI--YSADYYRVQSKSLLPVRWMPPEAILYGKFTTESDIWSFGVVLWEIFS 221
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror kinases are expressed in many tissues during development. They play important roles in bone and heart formation. Mutations in human Ror2 result in two different bone development genetic disorders, recessive Robinow syndrome and brachydactyly type B. Drosophila Ror is expressed only in the developing nervous system during neurite outgrowth and neuronal differentiation, suggesting a role for Drosophila Ror in neural development. More recently, mouse Ror1 and Ror2 have also been found to play an important role in regulating neurite growth in central neurons. Ror1 and Ror2 are believed to have some overlapping and redundant functions. Length = 283 |
| >gnl|CDD|173674 cd05583, STKc_MSK_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase | Back alignment and domain information |
|---|
Score = 45.9 bits (109), Expect = 2e-05
Identities = 42/169 (24%), Positives = 75/169 (44%), Gaps = 27/169 (15%)
Query: 33 LEEAKAVGNLRSER--LANLIGC--------CYEADERL-LVAEFMPNETLAKHLFHWET 81
+++AK + R+ER L + C ++ D +L L+ +++ L HL+ E
Sbjct: 42 VQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQTDTKLHLILDYVNGGELFTHLYQREH 101
Query: 82 QPMKWAMRLRVALYLAQ---ALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMK-- 136
V +Y+A+ AL++ G +Y D+ IL D +G+ L+ FGL K
Sbjct: 102 FTES-----EVRVYIAEIVLALDHLHQLG-IIYRDIKLENILLDSEGHVVLTDFGLSKEF 155
Query: 137 ---NSRDGKSYSTNLAFTPPEYMRTGRVTPESVV--YSFGTMLLDLLSG 180
S+ + + PE +R G + V +S G + +LL+G
Sbjct: 156 LAEEEERAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTG 204
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines. This triggers phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) in the C-terminal extension of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSKs are predominantly nuclear proteins. They are widely expressed in many tissues including heart, brain, lung, liver, kidney, and pancreas. There are two isoforms of MSK, called MSK1 and MSK2. Length = 288 |
| >gnl|CDD|173644 cd05079, PTKc_Jak1_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1 | Back alignment and domain information |
|---|
Score = 46.1 bits (109), Expect = 2e-05
Identities = 38/155 (24%), Positives = 72/155 (46%), Gaps = 11/155 (7%)
Query: 34 EEAKAVGNLRSERLANLIGCCYEADER--LLVAEFMPNETLAKHLFHWETQPMKWAMRLR 91
+E + + NL E + G C E L+ EF+P+ +L ++L + +L+
Sbjct: 55 KEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPR-NKNKINLKQQLK 113
Query: 92 VALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYST----- 146
A+ + + ++Y S+ + ++ DL A +L + + ++ FGL K K Y T
Sbjct: 114 YAVQICKGMDYLGSR-QYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEYYTVKDDL 172
Query: 147 --NLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLS 179
+ + PE + + S V+SFG L +LL+
Sbjct: 173 DSPVFWYAPECLIQSKFYIASDVWSFGVTLYELLT 207
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak1 is widely expressed in many tissues. Many cytokines are dependent on Jak1 for signaling, including those that use the shared receptor subunits common gamma chain (IL-2, IL-4, IL-7, IL-9, IL-15, IL-21) and gp130 (IL-6, IL-11, oncostatin M, G-CSF, and IFNs, among others). The many varied interactions of Jak1 and its ubiquitous expression suggest many biological roles. Jak1 is important in neurological development, as well as in lymphoid development and function. It also plays a role in the pathophysiology of cardiac hypertrophy and heart failure. A mutation in the ATP-binding site of Jak1 was identified in a human uterine leiomyosarcoma cell line, resulting in defective cytokine induction and antigen presentation, thus allowing the tumor to evade the immune system. Length = 284 |
| >gnl|CDD|132973 cd06642, STKc_STK25-YSK1, Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1 | Back alignment and domain information |
|---|
Score = 45.8 bits (108), Expect = 2e-05
Identities = 39/148 (26%), Positives = 68/148 (45%), Gaps = 14/148 (9%)
Query: 98 QALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLAFTP----P 153
+ L+Y S+ R ++ D+ A +L + G+ +L+ FG+ D + TP P
Sbjct: 112 KGLDYLHSE-RKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTFVGTPFWMAP 170
Query: 154 EYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDS--ALEGHFSN 211
E ++ ++ ++S G ++L G+ PP+ L +R FL+ +S LEG +S
Sbjct: 171 EVIKQSAYDFKADIWSLGITAIELAKGE--PPNSDLHPMRVL-FLIPKNSPPTLEGQYSK 227
Query: 212 DEGTELVRLASRCLQSEARERPNAKSLV 239
CL + R RP AK L+
Sbjct: 228 ----PFKEFVEACLNKDPRFRPTAKELL 251
|
Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25 is a candidate gene responsible for pseudopseudohypoparathyroidism (PPHP), a disease that shares features with the Albright hereditary osteodystrophy (AHO) phenotype. Length = 277 |
| >gnl|CDD|133229 cd05098, PTKc_FGFR1, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1 | Back alignment and domain information |
|---|
Score = 46.2 bits (109), Expect = 2e-05
Identities = 61/252 (24%), Positives = 108/252 (42%), Gaps = 39/252 (15%)
Query: 17 LKSSVLESSDLGETLN-LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKH 75
LKS E DL + ++ +E K +G + + + NL+G C + ++ E+ L ++
Sbjct: 58 LKSDATEK-DLSDLISEMEMMKMIG--KHKNIINLLGACTQDGPLYVIVEYASKGNLREY 114
Query: 76 L--------------FHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILF 121
L + + + + A +A+ +EY +SK + ++ DL A +L
Sbjct: 115 LRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLASK-KCIHRDLAARNVLV 173
Query: 122 DKDGNPRLSSFGLMKNSRDGKSY--STN----LAFTPPEYMRTGRVTPESVVYSFGTMLL 175
+D +++ FGL ++ Y +TN + + PE + T +S V+SFG +L
Sbjct: 174 TEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLW 233
Query: 176 DL--LSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGT---ELVRLASRCLQSEAR 230
++ L G P +L F LL EGH + EL + C +
Sbjct: 234 EIFTLGGSPYPGVPVEEL-----FKLLK----EGHRMDKPSNCTNELYMMMRDCWHAVPS 284
Query: 231 ERPNAKSLVISL 242
+RP K LV L
Sbjct: 285 QRPTFKQLVEDL 296
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. Alternative splicing of FGFR1 transcripts produces a variety of isoforms, which are differentially expressed in cells. FGFR1 binds the ligands, FGF1 and FGF2, with high affinity and has also been reported to bind FGF4, FGF6, and FGF9. FGFR1 signaling is critical in the control of cell migration during embryo development. It promotes cell proliferation in fibroblasts. Nuclear FGFR1 plays a role in the regulation of transcription. Mutations, insertions or deletions of FGFR1 have been identified in patients with Kallman's syndrome (KS), an inherited disorder characterized by hypogonadotropic hypogonadism and loss of olfaction. Aberrant FGFR1 expression has been found in some human cancers including 8P11 myeloproliferative syndrome (EMS), breast cancer, and pancreatic adenocarcinoma. Length = 307 |
| >gnl|CDD|173710 cd05620, STKc_nPKC_delta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta | Back alignment and domain information |
|---|
Score = 46.1 bits (109), Expect = 2e-05
Identities = 42/147 (28%), Positives = 71/147 (48%), Gaps = 18/147 (12%)
Query: 53 CCYEADERLL-VAEFMPNETLAKHLFHWETQPMKWAMRL-RVALYLAQ---ALEYCSSKG 107
C ++ E L V EF+ L +FH + K L R Y A+ L++ SKG
Sbjct: 63 CTFQTKEHLFFVMEFLNGGDL---MFHIQD---KGRFDLYRATFYAAEIVCGLQFLHSKG 116
Query: 108 RALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLAFTP----PEYMRTGRVTP 163
+Y DL ++ D+DG+ +++ FG+ K + G + ++ TP PE ++ + T
Sbjct: 117 -IIYRDLKLDNVMLDRDGHIKIADFGMCKENVFGDNRASTFCGTPDYIAPEILQGLKYTF 175
Query: 164 ESVVYSFGTMLLDLLSGKHIPPSHALD 190
+SFG +L ++L G+ P H D
Sbjct: 176 SVDWWSFGVLLYEMLIGQ--SPFHGDD 200
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. It slows down cell proliferation, inducing cell cycle arrest and enhancing cell differentiation. PKC-delta is also involved in the regulation of transcription as well as immune and inflammatory responses. It plays a central role in the genotoxic stress response that leads to DNA damaged-induced apoptosis. Length = 316 |
| >gnl|CDD|173724 cd06606, STKc_MAPKKK, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase | Back alignment and domain information |
|---|
Score = 45.6 bits (109), Expect = 2e-05
Identities = 54/245 (22%), Positives = 92/245 (37%), Gaps = 48/245 (19%)
Query: 20 SVLESSDLGETLN--LEEAKAVGNLRSERLANLIGCCYEADER--LLVAEFMPNETLAKH 75
SV S D E L E + + +L+ + G + ++ + E++ +L+
Sbjct: 32 SVELSGDSEEELEALEREIRILSSLQHPNIVRYYGSERDEEKNTLNIFLEYVSGGSLSSL 91
Query: 76 L-----FHWETQPMKWAMRLRVALYLAQ---ALEYCSSKGRALYH-DLNAYRILFDKDGN 126
L E + Y Q L Y S G H D+ IL D DG
Sbjct: 92 LKKFGKLP-EPV---------IRKYTRQILEGLAYLHSNGIV--HRDIKGANILVDSDGV 139
Query: 127 PRLSSFGLMK--NSRDGKSYSTNLAFTP----PEYMRTGRVTPESVVYSFGTMLLDLLSG 180
+L+ FG K + + ++ TP PE +R + ++S G ++++ +G
Sbjct: 140 VKLADFGCAKRLGDIETGEGTGSVRGTPYWMAPEVIRGEEYGRAADIWSLGCTVIEMATG 199
Query: 181 KHIPPSHALDLIRSKNFLLLMDSALEG-------HFSNDEGTELVRLASRCLQSEARERP 233
K PP L L G H S +E + +R +CL+ + ++RP
Sbjct: 200 K--PPWSELG----NPMAALYKIGSSGEPPEIPEHLS-EEAKDFLR---KCLRRDPKKRP 249
Query: 234 NAKSL 238
A L
Sbjct: 250 TADEL 254
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKKK5) and ASK2 (or MAPKKK6), MEKK1, MEKK2, MEKK3, MEKK4, as well as plant and fungal MAPKKKs. Also included in this subfamily are the cell division control proteins Schizosaccharomyces pombe Cdc7 and Saccharomyces cerevisiae Cdc15. Length = 260 |
| >gnl|CDD|133172 cd05040, PTKc_Ack_like, Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase | Back alignment and domain information |
|---|
Score = 45.5 bits (108), Expect = 2e-05
Identities = 39/154 (25%), Positives = 63/154 (40%), Gaps = 9/154 (5%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQPMKWAMRLRV 92
L+EA + +L E L L G ++V E P +L L +
Sbjct: 44 LKEAAIMHSLDHENLIRLYGVVL-THPLMMVTELAPLGSLLDRLRKDALGHFLISTLCDY 102
Query: 93 ALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTN----- 147
A+ +A + Y SK R ++ DL A IL D ++ FGLM+ + +
Sbjct: 103 AVQIANGMRYLESK-RFIHRDLAARNILLASDDKVKIGDFGLMRALPQNEDHYVMEEHLK 161
Query: 148 --LAFTPPEYMRTGRVTPESVVYSFGTMLLDLLS 179
A+ PE +RT + S V+ FG L ++ +
Sbjct: 162 VPFAWCAPESLRTRTFSHASDVWMFGVTLWEMFT 195
|
Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with androgen-independent prostate cancer progression. Tnk1 regulates TNFalpha signaling and may play an important role in cell death. Length = 257 |
| >gnl|CDD|173728 cd06614, STKc_PAK, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase | Back alignment and domain information |
|---|
Score = 45.7 bits (109), Expect = 2e-05
Identities = 49/206 (23%), Positives = 88/206 (42%), Gaps = 17/206 (8%)
Query: 41 NLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQPMKWAMRLRVALYLAQAL 100
+ + + + DE +V E+M +L + M V + Q L
Sbjct: 71 DCKHPNIVDYYDSYLVGDELWVVMEYMDGGSLTDIITQNFV-RMNEPQIAYVCREVLQGL 129
Query: 101 EYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLAFTP----PEYM 156
EY S+ ++ D+ + IL KDG+ +L+ FG KS ++ TP PE +
Sbjct: 130 EYLHSQNV-IHRDIKSDNILLSKDGSVKLADFGFAAQLTKEKSKRNSVVGTPYWMAPEVI 188
Query: 157 RTGRVTPESVVYSFGTMLLDLLSGK--HI--PPSHALDLIRSKNFLLLMDSALEGHFSND 212
+ P+ ++S G M +++ G+ ++ PP AL LI +K L + +S
Sbjct: 189 KRKDYGPKVDIWSLGIMCIEMAEGEPPYLREPPLRALFLITTKGIPPLKNPEK---WSP- 244
Query: 213 EGTELVRLASRCLQSEARERPNAKSL 238
E ++CL + +RP+A+ L
Sbjct: 245 ---EFKDFLNKCLVKDPEKRPSAEEL 267
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). Group II PAKs contain a PBD and a catalytic domain, but lack other motifs found in group I PAKs. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. Group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX; no such binding has been demonstrated for group II PAKs. Length = 286 |
| >gnl|CDD|132954 cd06623, PKc_MAPKK_plant_like, Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins | Back alignment and domain information |
|---|
Score = 44.9 bits (107), Expect = 3e-05
Identities = 48/209 (22%), Positives = 85/209 (40%), Gaps = 43/209 (20%)
Query: 54 CYEA---DERL-LVAEFMPNETLA---KHLFHWETQPMKWAMRLRVALYLAQALEYCSSK 106
CY A + + +V E+M +LA K + + +A + + L+Y +K
Sbjct: 64 CYGAFYKEGEISIVLEYMDGGSLADLLKKVGKIPEPVLA-----YIARQILKGLDYLHTK 118
Query: 107 GRALYHDLNAYRILFDKDGNPRLSSFG---LMKNSRDGK-SYSTNLAFTPPEYMRTGRVT 162
++ D+ +L + G +++ FG +++N+ D ++ + + PE R+
Sbjct: 119 RHIIHRDIKPSNLLINSKGEVKIADFGISKVLENTLDQCNTFVGTVTYMSPE-----RIQ 173
Query: 163 PESVVY-----SFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMD--------SALEGHF 209
ES Y S G LL+ GK P +F LM S F
Sbjct: 174 GESYSYAADIWSLGLTLLECALGKF-PFLPP----GQPSFFELMQAICDGPPPSLPAEEF 228
Query: 210 SNDEGTELVRLASRCLQSEARERPNAKSL 238
S E + + S CLQ + ++RP+A L
Sbjct: 229 S-PEFRDFI---SACLQKDPKKRPSAAEL 253
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include MAPKKs from plants, kinetoplastids, alveolates, and mycetozoa. The MAPKK, LmxPK4, from Leishmania mexicana, is important in differentiation and virulence. Dictyostelium discoideum MEK1 is required for proper chemotaxis. MEK1 null mutants display severe defects in cell polarization and directional movement. Plants contain multiple MAPKKs like other eukaryotes. The Arabidopsis genome encodes for 10 MAPKKs while poplar and rice contain 13 MAPKKs each. The functions of these proteins have not been fully elucidated. There is evidence to suggest that MAPK cascades are involved in plant stress responses. In Arabidopsis, MKK3 plays a role in pathogen signaling, MKK2 is involved in cold and salt stress signaling, MKK4/MKK5 participates in innate immunity, and MKK7 regulates basal and systemic acquired resistance. Length = 264 |
| >gnl|CDD|173673 cd05582, STKc_RSK_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase | Back alignment and domain information |
|---|
Score = 44.8 bits (106), Expect = 4e-05
Identities = 34/100 (34%), Positives = 55/100 (55%), Gaps = 9/100 (9%)
Query: 92 VALYLAQ---ALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG--KSYS- 145
V YLA+ AL++ S G +Y DL IL D++G+ +L+ FGL K S D K+YS
Sbjct: 100 VKFYLAELALALDHLHSLG-IIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSF 158
Query: 146 -TNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIP 184
+ + PE + T + +SFG ++ ++L+G +P
Sbjct: 159 CGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTG-SLP 197
|
Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylates all known RSK substrates. RSKs act as downstream effectors of mitogen-activated protein kinase (MAPK) and play key roles in mitogen-activated cell growth, differentiation, and survival. Mammals possess four RSK isoforms (RSK1-4) from distinct genes. RSK proteins are also referred to as MAP kinase-activated protein kinases (MAPKAPKs), p90-RSKs, or p90S6Ks. Length = 318 |
| >gnl|CDD|133228 cd05097, PTKc_DDR_like, Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 44.6 bits (105), Expect = 5e-05
Identities = 50/232 (21%), Positives = 94/232 (40%), Gaps = 43/232 (18%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQP--------- 83
L+E K + L++ + L+G C D ++ E+M N L + L E +
Sbjct: 65 LKEIKIMSRLKNPNIIRLLGVCVSDDPLCMITEYMENGDLNQFLSQREIESTFTHANNIP 124
Query: 84 -MKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGK 142
+ A L +A+ +A ++Y +S ++ DL L +++ FG+ +N G
Sbjct: 125 SVSIANLLYMAVQIASGMKYLASLN-FVHRDLATRNCLVGNHYTIKIADFGMSRNLYSGD 183
Query: 143 SYSTN-LAFTPPEYMR-----TGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKN 196
Y A P +M G+ T S V++FG L ++ + L + +
Sbjct: 184 YYRIQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEMFT-----------LCKEQP 232
Query: 197 FLLLMDSAL---EGHFSNDEGTE------------LVRLASRCLQSEARERP 233
+ LL D + G F ++G + + +L RC + ++RP
Sbjct: 233 YSLLSDEQVIENTGEFFRNQGRQIYLSQTPLCPSPVFKLMMRCWSRDIKDRP 284
|
Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including breast, colon, ovarian, brain, and lung. There is no evidence showing that DDRs act as transforming oncogenes. They are more likely to play a role in the regulation of tumor growth and metastasis. Length = 295 |
| >gnl|CDD|132987 cd06656, STKc_PAK3, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3 | Back alignment and domain information |
|---|
Score = 44.7 bits (105), Expect = 5e-05
Identities = 47/186 (25%), Positives = 79/186 (42%), Gaps = 34/186 (18%)
Query: 98 QALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLAFTP----P 153
QAL++ S + ++ D+ + IL DG+ +L+ FG +S + + TP P
Sbjct: 126 QALDFLHSN-QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAP 184
Query: 154 EYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDE 213
E + P+ ++S G M ++++ G+ PP + +R+ L L+ + N E
Sbjct: 185 EVVTRKAYGPKVDIWSLGIMAIEMVEGE--PPYLNENPLRA---LYLIATNGTPELQNPE 239
Query: 214 GTELV--RLASRCLQSEARERPNAKSLVISLMSLQKEAEQVPSYVLLGIQHETAPSTKPL 271
V +RCL+ + R +AK L +QH KPL
Sbjct: 240 RLSAVFRDFLNRCLEMDVDRRGSAKEL---------------------LQHPFLKLAKPL 278
Query: 272 -SLTPL 276
SLTPL
Sbjct: 279 SSLTPL 284
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK3 is highly expressed in the brain. It is implicated in neuronal plasticity, synapse formation, dendritic spine morphogenesis, cell cycle progression, neuronal migration, and apoptosis. Inactivating mutations in the PAK3 gene cause X-linked non-syndromic mental retardation, the severity of which depends on the site of the mutation. Length = 297 |
| >gnl|CDD|173699 cd05608, STKc_GRK1, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1 | Back alignment and domain information |
|---|
Score = 44.1 bits (104), Expect = 6e-05
Identities = 33/99 (33%), Positives = 49/99 (49%), Gaps = 10/99 (10%)
Query: 91 RVALYLAQ---ALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTN 147
R Y AQ LE+ + R +Y DL +L D DGN R+S GL +DG+S +
Sbjct: 98 RACFYTAQIISGLEHLHQR-RIIYRDLKPENVLLDNDGNVRISDLGLAVELKDGQSKTKG 156
Query: 148 LAFTP----PEYMRTGRVTPESVVY-SFGTMLLDLLSGK 181
A TP PE ++ G SV Y + G L ++++ +
Sbjct: 157 YAGTPGFMAPELLQ-GEEYDFSVDYFALGVTLYEMIAAR 194
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual group of GRKs and is expressed in retinal cells. It phosphorylates rhodopsin in rod cells, which leads to termination of the phototransduction cascade. Mutations in GRK1 are associated to a recessively inherited form of stationary nightblindness called Oguchi disease. Length = 280 |
| >gnl|CDD|173650 cd05094, PTKc_TrkC, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C | Back alignment and domain information |
|---|
Score = 44.2 bits (104), Expect = 7e-05
Identities = 43/170 (25%), Positives = 76/170 (44%), Gaps = 31/170 (18%)
Query: 35 EAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHL--------FHWETQPMK- 85
EA+ + NL+ E + G C + D ++V E+M + L K L + QP +
Sbjct: 57 EAELLTNLQHEHIVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQA 116
Query: 86 -----WAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRD 140
+ L +A +A + Y +S+ ++ DL L + ++ FG+ SRD
Sbjct: 117 KGELGLSQMLHIASQIASGMVYLASQ-HFVHRDLATRNCLVGANLLVKIGDFGM---SRD 172
Query: 141 GKSYSTN-----------LAFTPPEYMRTGRVTPESVVYSFGTMLLDLLS 179
YST+ + + PPE + + T ES V+SFG +L ++ +
Sbjct: 173 --VYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFT 220
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some non-neural tissues including the developing heart. NT3/TrkC signaling plays an important role in the innervation of the cardiac conducting system and the development of smooth muscle cells. Mice deficient with NT3 and TrkC have multiple heart defects. NT3/TrkC signaling is also critical for the development and maintenance of enteric neurons that are important for the control of gut peristalsis. Length = 291 |
| >gnl|CDD|238112 cd00189, TPR, Tetratricopeptide repeat domain; typically contains 34 amino acids [WLF]-X(2)-[LIM]-[GAS]-X(2)-[YLF]-X(8)-[ASE]-X(3)-[FYL]- X(2)-[ASL]-X(4)-[PKE] is the consensus sequence; found in a variety of organisms including bacteria, cyanobacteria, yeast, fungi, plants, and humans in various subcellular locations; involved in a variety of functions including protein-protein interactions, but common features in the interaction partners have not been defined; involved in chaperone, cell-cycle, transciption, and protein transport complexes; the number of TPR motifs varies among proteins (1,3-11,13 15,16,19); 5-6 tandem repeats generate a right-handed helical structure with an amphipathic channel that is thought to accomodate an alpha-helix of a target protein; it has been proposed that TPR proteins preferably interact with WD-40 repeat proteins, but in many instances several TPR-proteins seem to aggregate to multi-protein complexes; examples of TPR-proteins include, Cdc16p, Cdc23p and Cdc27p components of the cyclosome/APC, the Pex5p/Pas10p receptor for peroxisomal targeting signals, the Tom70p co-receptor for mitochondrial targeting signals, Ser/Thr phosphatase 5C and the p110 subunit of O-GlcNAc transferase; three copies of the repeat are present here | Back alignment and domain information |
|---|
Score = 41.2 bits (97), Expect = 7e-05
Identities = 21/101 (20%), Positives = 39/101 (38%), Gaps = 7/101 (6%)
Query: 323 KKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPT---VYARRCLSYLMNDMPQEALGDAMQ 379
G+ ++ D+ A++ Y + ++ + P Y +Y +EAL D +
Sbjct: 4 LNLGNLYYKLGDYDEALEYYEKALE----LDPDNADAYYNLAAAYYKLGKYEEALEDYEK 59
Query: 380 AQVVSPDWPTALYLQAACLFSLGMENDARETLKDGTNLEAK 420
A + PD A Y + LG +A E + L+
Sbjct: 60 ALELDPDNAKAYYNLGLAYYKLGKYEEALEAYEKALELDPN 100
|
Length = 100 |
| >gnl|CDD|173719 cd05630, STKc_GRK6, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6 | Back alignment and domain information |
|---|
Score = 43.9 bits (103), Expect = 7e-05
Identities = 39/160 (24%), Positives = 68/160 (42%), Gaps = 10/160 (6%)
Query: 28 GETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQPMKWA 87
GE++ L E + + + S + +L D LV M L H++H +
Sbjct: 43 GESMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGEAGFEEG 102
Query: 88 MRLRVALYLAQ---ALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG--- 141
R Y A+ LE + R +Y DL IL D G+ R+S GL + +G
Sbjct: 103 ---RAVFYAAEICCGLEDLHQE-RIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTI 158
Query: 142 KSYSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGK 181
K + + PE ++ R T ++ G +L ++++G+
Sbjct: 159 KGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQ 198
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as multiple splice variants with different domain architectures. It is post-translationally palmitoylated and localized in the membrane. GRK6 plays important roles in the regulation of dopamine, M3 muscarinic, opioid, and chemokine receptor signaling. It also plays maladaptive roles in addiction and Parkinson's disease. GRK6-deficient mice exhibit altered dopamine receptor regulation, decreased lymphocyte chemotaxis, and increased acute inflammation and neutrophil chemotaxis. Length = 285 |
| >gnl|CDD|133204 cd05073, PTKc_Hck, Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase | Back alignment and domain information |
|---|
Score = 43.9 bits (103), Expect = 8e-05
Identities = 46/210 (21%), Positives = 91/210 (43%), Gaps = 19/210 (9%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQPMKWAMRLRV 92
L EA + L+ ++L L + ++ EFM +L L E +
Sbjct: 49 LAEANVMKTLQHDKLVKL-HAVVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDF 107
Query: 93 ALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMK-------NSRDGKSYS 145
+ +A+ + + + ++ DL A IL +++ FGL + +R+G +
Sbjct: 108 SAQIAEGMAFIEQRNY-IHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFP 166
Query: 146 TNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIP-PSHA-LDLIRSKNFLLLMDS 203
+ +T PE + G T +S V+SFG +L+++++ IP P + ++IR+ ++
Sbjct: 167 --IKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRA------LER 218
Query: 204 ALEGHFSNDEGTELVRLASRCLQSEARERP 233
+ EL + RC ++ ERP
Sbjct: 219 GYRMPRPENCPEELYNIMMRCWKNRPEERP 248
|
Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Hck is present in myeloid and lymphoid cells that play a role in the development of cancer. It may be important in the oncogenic signaling of the protein Tel-Abl, which induces a chronic myelogenous leukemia (CML)-like disease. Hck also acts as a negative regulator of granulocyte colony-stimulating factor (G-CSF)-induced proliferation of granulocytic precursors, suggesting a possible role in the development of acute myeloid leukemia (AML). In addition, Hck is essential in regulating the degranulation of polymorphonuclear leukocytes (PMNs). Genetic polymorphisms affect the expression level of Hck, which affects PMN mediator release and influences the development of chronic obstructive pulmonary disease (COPD). Length = 260 |
| >gnl|CDD|133189 cd05058, PTKc_Met_Ron, Catalytic domain of the Protein Tyrosine Kinases, Met and Ron | Back alignment and domain information |
|---|
Score = 43.6 bits (103), Expect = 8e-05
Identities = 59/236 (25%), Positives = 109/236 (46%), Gaps = 17/236 (7%)
Query: 14 HCHLKSSVLESSDLGETLN-LEEAKAVGNLRSERLANLIGCCYEAD-ERLLVAEFMPNET 71
HC +KS + +DL E L+E + + + +L+G C ++ L+V +M +
Sbjct: 25 HCAVKS-LNRITDLEEVEQFLKEGIIMKDFSHPNVLSLLGICLPSEGSPLVVLPYMKHGD 83
Query: 72 LAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSS 131
L ++ ET + L +A+ +EY +SK + ++ DL A + D+ +++
Sbjct: 84 L-RNFIRSETHNPTVKDLIGFGLQVAKGMEYLASK-KFVHRDLAARNCMLDESFTVKVAD 141
Query: 132 FGLMKNSRDGKSYSTN---LAFTPPEYM-----RTGRVTPESVVYSFGTMLLDLLSGKHI 183
FGL ++ D + YS + A P ++M +T + T +S V+SFG +L +L++ +
Sbjct: 142 FGLARDIYDKEYYSVHNHTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT-RGA 200
Query: 184 PPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERPNAKSLV 239
PP +D +LL L+ + D L + C + RP LV
Sbjct: 201 PPYPDVDSFDITVYLLQGRRLLQPEYCPD---PLYEVMLSCWHPKPEMRPTFSELV 253
|
Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also called the HGF receptor. HGF/Met signaling plays a role in growth, transformation, cell motility, invasion, metastasis, angiogenesis, wound healing, and tissue regeneration. Aberrant expression of Met through mutations or gene amplification is associated with many human cancers including hereditary papillary renal and gastric carcinomas. The ligand for Ron is macrophage stimulating protein (MSP). Ron signaling is important in regulating cell motility, adhesion, proliferation, and apoptosis. Aberrant Ron expression is implicated in tumorigenesis and metastasis. Length = 262 |
| >gnl|CDD|173755 cd08215, STKc_Nek, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase | Back alignment and domain information |
|---|
Score = 43.6 bits (104), Expect = 9e-05
Identities = 40/161 (24%), Positives = 65/161 (40%), Gaps = 38/161 (23%)
Query: 96 LAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLAFTP--- 152
L AL+Y S+ + L+ D+ I +G +L FG+ K S+ +
Sbjct: 112 LCLALKYLHSR-KILHRDIKPQNIFLTSNGLVKLGDFGI------SKVLSSTVDLAKTVV 164
Query: 153 --PEYMRTGRVTPE----------SVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLL 200
P Y+ +PE S ++S G +L +L + KH P +N L L
Sbjct: 165 GTPYYL-----SPELCQNKPYNYKSDIWSLGCVLYELCTLKH--PFEG------ENLLEL 211
Query: 201 MDSALEGHF---SNDEGTELVRLASRCLQSEARERPNAKSL 238
L+G + + +EL L S LQ + ERP+ +
Sbjct: 212 ALKILKGQYPPIPSQYSSELRNLVSSLLQKDPEERPSIAQI 252
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Length = 258 |
| >gnl|CDD|132972 cd06641, STKc_MST3, Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3 | Back alignment and domain information |
|---|
Score = 43.5 bits (102), Expect = 9e-05
Identities = 37/150 (24%), Positives = 68/150 (45%), Gaps = 14/150 (9%)
Query: 96 LAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLAFTP--- 152
+ + L+Y S+ + ++ D+ A +L + G +L+ FG+ D + TP
Sbjct: 110 ILKGLDYLHSE-KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWM 168
Query: 153 -PEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDS--ALEGHF 209
PE ++ ++ ++S G ++L G+ PP L ++ FL+ ++ LEG++
Sbjct: 169 APEVIKQSAYDSKADIWSLGITAIELAKGE--PPHSELHPMKVL-FLIPKNNPPTLEGNY 225
Query: 210 SNDEGTELVRLASRCLQSEARERPNAKSLV 239
S L CL E RP AK L+
Sbjct: 226 SK----PLKEFVEACLNKEPSFRPTAKELL 251
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and intrauterine growth retardation. Length = 277 |
| >gnl|CDD|132979 cd06648, STKc_PAK_II, Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase | Back alignment and domain information |
|---|
Score = 43.6 bits (103), Expect = 9e-05
Identities = 43/193 (22%), Positives = 73/193 (37%), Gaps = 25/193 (12%)
Query: 58 DERLLVAEFMPNETLAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAY 117
DE +V EF+ L + H + A V L + +AL + ++G ++ D+ +
Sbjct: 89 DELWVVMEFLEGGALTDIVTHTRMNEEQIAT---VCLAVLKALSFLHAQG-VIHRDIKSD 144
Query: 118 RILFDKDGNPRLSSFGLMKNSRDGKSYSTNLAFTP----PEYMRTGRVTPESVVYSFGTM 173
IL DG +LS FG +L TP PE + E ++S G M
Sbjct: 145 SILLTSDGRVKLSDFGFCAQVSKEVPRRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIM 204
Query: 174 LLDLLSGK----HIPPSHALDLIRSKNFLLLMDSALEGHFSNDE---GTELVRLASRCLQ 226
+++++ G+ + PP A+ IR + L R L
Sbjct: 205 VIEMVDGEPPYFNEPPLQAMKRIRD----------NLPPKLKNLHKVSPRLRSFLDRMLV 254
Query: 227 SEARERPNAKSLV 239
+ +R A L+
Sbjct: 255 RDPAQRATAAELL 267
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs found in group I PAKs, such as an AID (autoinhibitory domain) and SH3 binding sites. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. While group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX, no such binding has been demonstrated for group II PAKs. Some known substrates of group II PAKs are also substrates of group I PAKs such as Raf, BAD, LIMK and GEFH1. Unique group II substrates include MARK/Par-1 and PDZ-RhoGEF. Group II PAKs play important roles in filopodia formation, neuron extension, cytoskeletal organization, and cell survival. Length = 285 |
| >gnl|CDD|173683 cd05592, STKc_nPKC_theta_delta, Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta | Back alignment and domain information |
|---|
Score = 43.2 bits (102), Expect = 1e-04
Identities = 43/147 (29%), Positives = 71/147 (48%), Gaps = 18/147 (12%)
Query: 53 CCYEADERLL-VAEFMPNETLAKHLFHWETQPMKWAMRLRVALYLAQ---ALEYCSSKGR 108
C ++ E L V E++ L H+ Q R Y A+ L++ KG
Sbjct: 63 CTFQTKEHLFFVMEYLNGGDLMFHI-----QSSGRFDEARARFYAAEIICGLQFLHKKG- 116
Query: 109 ALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLAFTP----PEYMRTGRVTPE 164
+Y DL +L DKDG+ +++ FG+ K + +G+ ++ TP PE ++ G+ E
Sbjct: 117 IIYRDLKLDNVLLDKDGHIKIADFGMCKENMNGEGKASTFCGTPDYIAPEILK-GQKYNE 175
Query: 165 SV-VYSFGTMLLDLLSGKHIPPSHALD 190
SV +SFG +L ++L G+ P H D
Sbjct: 176 SVDWWSFGVLLYEMLIGQ--SPFHGED 200
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in several aspects of T-cell biology. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. Length = 316 |
| >gnl|CDD|132978 cd06647, STKc_PAK_I, Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase | Back alignment and domain information |
|---|
Score = 43.4 bits (102), Expect = 1e-04
Identities = 55/226 (24%), Positives = 93/226 (41%), Gaps = 37/226 (16%)
Query: 58 DERLLVAEFMPNETLAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAY 117
DE +V E++ +L + + A R L QALE+ S ++ D+ +
Sbjct: 89 DELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECL---QALEFLHSNQ-VIHRDIKSD 144
Query: 118 RILFDKDGNPRLSSFGLMKNSRDGKSYSTNLAFTP----PEYMRTGRVTPESVVYSFGTM 173
IL DG+ +L+ FG +S + + TP PE + P+ ++S G M
Sbjct: 145 NILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIM 204
Query: 174 LLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELV--RLASRCLQSEARE 231
++++ G+ PP + +R+ L L+ + N E + +RCL+ + +
Sbjct: 205 AIEMVEGE--PPYLNENPLRA---LYLIATNGTPELQNPEKLSAIFRDFLNRCLEMDVEK 259
Query: 232 RPNAKSLVISLMSLQKEAEQVPSYVLLGIQHETAPSTKPL-SLTPL 276
R +AK L +QH KPL SLTPL
Sbjct: 260 RGSAKEL---------------------LQHPFLKIAKPLSSLTPL 284
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs, also called conventional PAKs, include PAK1, PAK2, and PAK3. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). They interact with the SH3 domain containing proteins Nck, Grb2 and PIX. Binding of group I PAKs to activated GTPases leads to conformational changes that destabilize the AID, allowing autophosphorylation and full activation of the kinase domain. Known group I PAK substrates include MLCK, Bad, Raf, MEK1, LIMK, Merlin, Vimentin, Myc, Stat5a, and Aurora A, among others. Length = 293 |
| >gnl|CDD|132991 cd06917, STKc_NAK1_like, Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 43.2 bits (102), Expect = 1e-04
Identities = 42/169 (24%), Positives = 68/169 (40%), Gaps = 20/169 (11%)
Query: 98 QALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLAFTP----P 153
AL+Y G ++ D+ A IL GN +L FG+ S + TP P
Sbjct: 112 VALKYIHKVG-VIHRDIKAANILVTNTGNVKLCDFGVAALLNQNSSKRSTFVGTPYWMAP 170
Query: 154 EYMRTGRVTPESV-VYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSA---LEG-H 208
E + G+ ++S G + ++ +G PP +D R+ +L+ S LE
Sbjct: 171 EVITEGKYYDTKADIWSLGITIYEMATGN--PPYSDVDAFRA--MMLIPKSKPPRLEDNG 226
Query: 209 FSNDEGTELVRLASRCLQSEARERPNAKSLVISLMSLQKEAEQVPSYVL 257
+S L + CL E +ER +A+ L K + P +L
Sbjct: 227 YS----KLLREFVAACLDEEPKERLSAEEL--LKSKWIKAHSKTPVSIL 269
|
Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of centrin, and phosphorylates substrates in a Cdc31p-dependent manner. Length = 277 |
| >gnl|CDD|132982 cd06651, STKc_MEKK3, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3 | Back alignment and domain information |
|---|
Score = 43.1 bits (101), Expect = 1e-04
Identities = 49/216 (22%), Positives = 93/216 (43%), Gaps = 21/216 (9%)
Query: 35 EAKAVGNLRSERLANLIGCCYEADERLLV--AEFMPNETLAKHLFHWETQPMKWAMRLRV 92
E + + NL+ ER+ GC + E+ L E+MP ++ L + + ++ +
Sbjct: 54 EIQLLKNLQHERIVQYYGCLRDRAEKTLTIFMEYMPGGSVKDQLKAYGA--LTESVTRKY 111
Query: 93 ALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKN------SRDG-KSYS 145
+ + + Y S ++ D+ IL D GN +L FG K S G +S +
Sbjct: 112 TRQILEGMSYLHSN-MIVHRDIKGANILRDSAGNVKLGDFGASKRLQTICMSGTGIRSVT 170
Query: 146 TNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRS--KNFLLLMDS 203
+ PE + ++ V+S G ++++L+ K PP + + + K +
Sbjct: 171 GTPYWMSPEVISGEGYGRKADVWSLGCTVVEMLTEK--PPWAEYEAMAAIFKIATQPTNP 228
Query: 204 ALEGHFSNDEGTELVRLASRCLQSEARERPNAKSLV 239
L H S + + + C+ EAR RP+A+ L+
Sbjct: 229 QLPSHIS-EHARDFL----GCIFVEARHRPSAEELL 259
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. In addition, MEKK3 is involved in interleukin-1 receptor and Toll-like receptor 4 signaling. It is also a specific regulator of the proinflammatory cytokines IL-6 and GM-CSF in some immune cells. MEKK3 also regulates calcineurin, which plays a critical role in T cell activation, apoptosis, skeletal myocyte differentiation, and cardiac hypertrophy. Length = 266 |
| >gnl|CDD|173630 cd05044, PTKc_c-ros, Catalytic domain of the Protein Tyrosine Kinase, C-ros | Back alignment and domain information |
|---|
Score = 42.5 bits (100), Expect = 2e-04
Identities = 46/220 (20%), Positives = 86/220 (39%), Gaps = 27/220 (12%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQPMKWAM---- 88
L+EA + N + L+G C + + ++ E M L +L + +
Sbjct: 47 LKEAHLMSNFNHPNIVKLLGVCLLNEPQYIIMELMEGGDLLSYLRDARVERFGPPLLTLK 106
Query: 89 -RLRVALYLAQALEYCSSKGRALYHDLNAYRIL-----FDKDGNPRLSSFGLMKNSRDGK 142
L + L +A+ Y + ++ DL A L +D D ++ FGL ++
Sbjct: 107 ELLDICLDVAKGCVYL-EQMHFIHRDLAARNCLVSEKGYDADRVVKIGDFGLARDIYKSD 165
Query: 143 SYST------NLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIP-PSHALDLIRSK 195
Y + + PE + G+ T +S V+SFG ++ ++L+ P P+
Sbjct: 166 YYRKEGEGLLPVRWMAPESLLDGKFTTQSDVWSFGVLMWEILTLGQQPYPALN------- 218
Query: 196 NFLLLMDSALEGHFSNDEGT--ELVRLASRCLQSEARERP 233
N +L G E ++ +L + C + ERP
Sbjct: 219 NQEVLQHVTAGGRLQKPENCPDKIYQLMTNCWAQDPSERP 258
|
Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male mice bearing inactive mutations of c-ros lack the initial segment of the epididymis and are infertile. The Drosophila protein, Sevenless, is required for the specification of the R7 photoreceptor cell during eye development. Length = 269 |
| >gnl|CDD|133195 cd05064, PTKc_EphR_A10, Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10 | Back alignment and domain information |
|---|
Score = 42.6 bits (100), Expect = 2e-04
Identities = 38/153 (24%), Positives = 71/153 (46%), Gaps = 9/153 (5%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQPMKWAMRLRV 92
L EA +G + L G + ++V E+M N L L E Q + A +L
Sbjct: 54 LAEALTLGQFDHSNIVRLEGVITRGNTMMIVTEYMSNGALDSFLRKHEGQLV--AGQLMG 111
Query: 93 ALY-LAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTN---- 147
L LA ++Y S G ++ L A+++L + D ++S F ++ + Y+T
Sbjct: 112 MLPGLASGMKYLSEMG-YVHKGLAAHKVLVNSDLVCKISGFRRLQEDKSEAIYTTMSGKS 170
Query: 148 -LAFTPPEYMRTGRVTPESVVYSFGTMLLDLLS 179
+ + PE ++ + S V+SFG ++ +++S
Sbjct: 171 PVLWAAPEAIQYHHFSSASDVWSFGIVMWEVMS 203
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). EphA10, which contains an inactive tyr kinase domain, may function to attenuate signals of co-clustered active receptors. EphA10 is mainly expressed in the testis. Ephrin/EphR interaction results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. Length = 266 |
| >gnl|CDD|132989 cd06658, STKc_PAK5, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5 | Back alignment and domain information |
|---|
Score = 42.7 bits (100), Expect = 2e-04
Identities = 38/145 (26%), Positives = 63/145 (43%), Gaps = 12/145 (8%)
Query: 57 ADERLLVAEFMPNETLAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNA 116
DE +V EF+ L + H + A V L + +AL Y ++G ++ D+ +
Sbjct: 91 GDELWVVMEFLEGGALTDIVTHTRMNEEQIAT---VCLSVLRALSYLHNQG-VIHRDIKS 146
Query: 117 YRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLAFTP----PEYMRTGRVTPESVVYSFGT 172
IL DG +LS FG +L TP PE + E ++S G
Sbjct: 147 DSILLTSDGRIKLSDFGFCAQVSKEVPKRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGI 206
Query: 173 MLLDLLSGK----HIPPSHALDLIR 193
M+++++ G+ + PP A+ IR
Sbjct: 207 MVIEMIDGEPPYFNEPPLQAMRRIR 231
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly expressed in the brain. It is not required for viability, but together with PAK6, it is required for normal levels of locomotion and activity, and for learning and memory. PAK5 cooperates with Inca (induced in neural crest by AP2) in the regulation of cell adhesion and cytoskeletal organization in the embryo and in neural crest cells during craniofacial development. PAK5 may also play a role in controlling the signaling of Raf-1, an effector of Ras, at the mitochondria. Length = 292 |
| >gnl|CDD|173652 cd05100, PTKc_FGFR3, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3 | Back alignment and domain information |
|---|
Score = 41.9 bits (98), Expect = 3e-04
Identities = 51/230 (22%), Positives = 99/230 (43%), Gaps = 33/230 (14%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQPMKWAMR--- 89
+E K +G + + + NL+G C + ++ E+ L ++L M ++
Sbjct: 68 MEMMKMIG--KHKNIINLLGACTQDGPLYVLVEYASKGNLREYLRARRPPGMDYSFDTCK 125
Query: 90 -----------LRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNS 138
+ A +A+ +EY +S+ + ++ DL A +L +D +++ FGL ++
Sbjct: 126 LPEEQLTFKDLVSCAYQVARGMEYLASQ-KCIHRDLAARNVLVTEDNVMKIADFGLARDV 184
Query: 139 RDGKSY--STN----LAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLI 192
+ Y +TN + + PE + T +S V+SFG +L ++ + + S +
Sbjct: 185 HNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFT---LGGSPYPGIP 241
Query: 193 RSKNFLLLMDSALEGHFSNDEGT---ELVRLASRCLQSEARERPNAKSLV 239
+ F LL EGH + EL + C + +RP K LV
Sbjct: 242 VEELFKLLK----EGHRMDKPANCTHELYMIMRECWHAVPSQRPTFKQLV 287
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. Many FGFR3 splice variants have been reported with the IIIb and IIIc isoforms being the predominant forms. FGFR3 IIIc is the isoform expressed in chondrocytes, the cells affected in dwarfism, while IIIb is expressed in epithelial cells. FGFR3 ligands include FGF1, FGF2, FGF4, FGF8, FGF9, and FGF23. It is a negative regulator of long bone growth. In the cochlear duct and in the lens, FGFR3 is involved in differentiation while it appears to have a role in cell proliferation in epithelial cells. Germline mutations in FGFR3 are associated with skeletal disorders including several forms of dwarfism. Some missense mutations are associated with multiple myeloma and carcinomas of the bladder and cervix. Overexpression of FGFR3 is found in thyroid carcinoma. Length = 334 |
| >gnl|CDD|132942 cd06611, STKc_SLK_like, Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 41.7 bits (98), Expect = 4e-04
Identities = 43/164 (26%), Positives = 71/164 (43%), Gaps = 29/164 (17%)
Query: 92 VALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGL-MKNSRDGKSYSTNLAF 150
V + +AL + S + ++ DL A IL DG+ +L+ FG+ KN + T +
Sbjct: 108 VCRQMLEALNFLHSH-KVIHRDLKAGNILLTLDGDVKLADFGVSAKNKSTLQKRDTFIG- 165
Query: 151 TP----PEYM--RTGRVTP---ESVVYSFGTMLLDLLSGKHIPPSHALDLIR-------S 194
TP PE + T + P ++ ++S G L++L + PP H L+ +R S
Sbjct: 166 TPYWMAPEVVACETFKDNPYDYKADIWSLGITLIELAQME--PPHHELNPMRVLLKILKS 223
Query: 195 KNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERPNAKSL 238
+ L S +S+ L CL + +RP A L
Sbjct: 224 EPPTLDQPS----KWSSSFNDFL----KSCLVKDPDDRPTAAEL 259
|
Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. SmSLK is capable of activating the MAPK Jun N-terminal kinase (JNK) pathway in human embryonic kidney (HEK) cells as well as in Xenopus oocytes. It may participate in regulating MAPK cascades during host-parasite interactions. Length = 280 |
| >gnl|CDD|173651 cd05095, PTKc_DDR2, Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2 | Back alignment and domain information |
|---|
Score = 41.8 bits (98), Expect = 4e-04
Identities = 56/239 (23%), Positives = 100/239 (41%), Gaps = 38/239 (15%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQP--------- 83
L+E K + L+ + L+ C +D ++ E+M N L + L E Q
Sbjct: 67 LKEIKIMSRLKDPNIIRLLAVCITSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVT 126
Query: 84 MKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKS 143
+ ++ + +A +A ++Y SS ++ DL L K+ +++ FG+ +N G
Sbjct: 127 ISYSTLIFMATQIASGMKYLSSLN-FVHRDLATRNCLVGKNYTIKIADFGMSRNLYSGDY 185
Query: 144 YSTN-LAFTPPEYMR-----TGRVTPESVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKN 196
Y A P +M G+ T S V++FG L ++L+ K P S D +N
Sbjct: 186 YRIQGRAVLPIRWMSWESILLGKFTTASDVWAFGVTLWEILTLCKEQPYSQLSDEQVIEN 245
Query: 197 FLLLMDSALEGHFSNDEGTE------------LVRLASRCLQSEARERPNAKSLVISLM 243
G F D+G + L +L C + A+ERP+ + + +L+
Sbjct: 246 ---------TGEFFRDQGRQVYLPKPALCPDSLYKLMLSCWRRNAKERPSFQEIHATLL 295
|
Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues with the highest levels found in skeletal muscle, skin, kidney and lung. It is important in cell proliferation and development. Mice, with a deletion of DDR2, suffer from dwarfism and delayed healing of epidermal wounds. DDR2 also contributes to collagen (type I) regulation by inhibiting fibrillogenesis and altering the morphology of collagen fibers. It is also expressed in immature dendritic cells (DCs), where it plays a role in DC activation and function. Length = 296 |
| >gnl|CDD|173721 cd05632, STKc_GRK5, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5 | Back alignment and domain information |
|---|
Score = 41.5 bits (97), Expect = 5e-04
Identities = 37/160 (23%), Positives = 65/160 (40%), Gaps = 10/160 (6%)
Query: 28 GETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQPMKWA 87
GE++ L E + + + S+ + NL D LV M L H+++ +
Sbjct: 43 GESMALNEKQILEKVNSQFVVNLAYAYETKDALCLVLTIMNGGDLKFHIYNMGNPGFE-- 100
Query: 88 MRLRVALYLAQ---ALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSY 144
R Y A+ LE + +Y DL IL D G+ R+S GL +G+S
Sbjct: 101 -EERALFYAAEILCGLEDLHREN-TVYRDLKPENILLDDYGHIRISDLGLAVKIPEGESI 158
Query: 145 S---TNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGK 181
+ + PE + R T + G ++ +++ G+
Sbjct: 159 RGRVGTVGYMAPEVLNNQRYTLSPDYWGLGCLIYEMIEGQ 198
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with the membrane though an N-terminal PIP2 binding domain and also binds phospholipids via its C-terminus. GRK5 deficiency is associated with early Alzheimer's disease in humans and mouse models. GRK5 also plays a crucial role in the pathogenesis of sporadic Parkinson's disease. It participates in the regulation and desensitization of PDGFRbeta, a receptor tyrosine kinase involved in a variety of downstream cellular effects including cell growth, chemotaxis, apoptosis, and angiogenesis. GRK5 also regulates Toll-like receptor 4, which is involved in innate and adaptive immunity. Length = 285 |
| >gnl|CDD|132980 cd06649, PKc_MEK2, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2 | Back alignment and domain information |
|---|
Score = 41.6 bits (97), Expect = 5e-04
Identities = 30/119 (25%), Positives = 58/119 (48%), Gaps = 9/119 (7%)
Query: 82 QPMKWAMRL------RVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLM 135
Q +K A R+ +V++ + + L Y K + ++ D+ IL + G +L FG+
Sbjct: 92 QVLKEAKRIPEEILGKVSIAVLRGLAYLREKHQIMHRDVKPSNILVNSRGEIKLCDFGVS 151
Query: 136 KNSRD--GKSYSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKH-IPPSHALDL 191
D S+ ++ PE ++ + +S ++S G L++L G++ IPP A +L
Sbjct: 152 GQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVELAIGRYPIPPPDAKEL 210
|
Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downstream targets, extracellular signal-regulated kinase (ERK) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK2, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK2, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. Length = 331 |
| >gnl|CDD|132961 cd06630, STKc_MEKK1, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1 | Back alignment and domain information |
|---|
Score = 41.4 bits (97), Expect = 5e-04
Identities = 50/239 (20%), Positives = 99/239 (41%), Gaps = 28/239 (11%)
Query: 18 KSSVLESSDLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLF 77
+++ E ++ E L +E + + L + ++G E L E+M +++ HL
Sbjct: 37 RNTSSEQEEVVEAL-RKEIRLMARLNHPHIIRMLGATCEDSHFNLFVEWMAGGSVS-HLL 94
Query: 78 HWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNP-RLSSFGLM- 135
+ K A+ + L + L Y + ++ D+ +L D G R++ FG
Sbjct: 95 S-KYGAFKEAVIINYTEQLLRGLSYLHEN-QIIHRDVKGANLLIDSTGQRLRIADFGAAA 152
Query: 136 ----KNSRDGK---SYSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHA 188
K + G+ +AF PE +R + V+S G +++++ + K PP +A
Sbjct: 153 RLAAKGTGAGEFQGQLLGTIAFMAPEVLRGEQYGRSCDVWSVGCVIIEMATAK--PPWNA 210
Query: 189 LDLIRSKNFLLLMDSA-------LEGHFSNDEGTELVRLASRCLQSEARERPNAKSLVI 240
S + L+ A + H S L + RCL+ + +RP ++ L+
Sbjct: 211 EKH--SNHLALIFKIASATTAPSIPEHLSPG----LRDVTLRCLELQPEDRPPSRELLK 263
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their respective MAPKKs, MEK1/2 and MKK4/MKK7, respectively. MEKK1 is important in regulating cell survival and apoptosis. MEKK1 also plays a role in cell migration, tissue maintenance and homeostasis, and wound healing. Length = 268 |
| >gnl|CDD|133212 cd05081, PTKc_Jak2_Jak3_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3 | Back alignment and domain information |
|---|
Score = 41.3 bits (97), Expect = 6e-04
Identities = 43/160 (26%), Positives = 72/160 (45%), Gaps = 23/160 (14%)
Query: 35 EAKAVGNLRSERLANLIGCCYEADER--LLVAEFMPNETLAKHLFHWETQPMKWAMRL-- 90
E + + +L+ + + G CY A R LV E++P +L +L K RL
Sbjct: 55 EIEILKSLQHDNIVKYKGVCYSAGRRNLRLVMEYLPYGSLRDYL-------QKHRERLDH 107
Query: 91 -RVALYLAQ---ALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYST 146
++ LY +Q +EY SK R ++ DL IL + + ++ FGL K K Y
Sbjct: 108 RKLLLYASQICKGMEYLGSK-RYVHRDLATRNILVESENRVKIGDFGLTKVLPQDKEYYK 166
Query: 147 -------NLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLS 179
+ + PE + + + S V+SFG +L +L +
Sbjct: 167 VREPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 206
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak2 is widely expressed in many tissues while Jak3 is expressed only in hematopoietic cells. Jak2 is essential for the signaling of hormone-like cytokines such as growth hormone, erythropoietin, thrombopoietin, and prolactin, as well as some IFNs and cytokines that signal through the IL-3 and gp130 receptors. Jak3 binds the shared receptor subunit common gamma chain and thus, is essential in the signaling of cytokines that use it such as IL-2, IL-4, IL-7, IL-9, IL-15, and IL-21. Disruption of Jak2 in mice results in an embryonic lethal phenotype with multiple defects including erythropoietic and cardiac abnormalities. It is the only Jak gene that results in a lethal phenotype when disrupted in mice. A mutation in the pseudokinase domain of Jak2, V617F, is present in many myeloproliferative diseases, including almost all patients with polycythemia vera, and 50% of patients with essential thrombocytosis and myelofibrosis. Jak3 is important in lymphoid development and myeloid cell differentiation. Inactivating mutations in Jak3 have been reported in humans with severe combined immunodeficiency (SCID). Length = 284 |
| >gnl|CDD|173703 cd05612, STKc_PRKX_like, Catalytic domain of PRKX-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 41.3 bits (97), Expect = 6e-04
Identities = 32/97 (32%), Positives = 49/97 (50%), Gaps = 22/97 (22%)
Query: 99 ALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLAFTPPEYMRT 158
ALEY SK +Y DL IL DK+G+ +L+ FG K RD ++++ L T PEY+
Sbjct: 113 ALEYLHSKE-IVYRDLKPENILLDKEGHIKLTDFGFAKKLRD-RTWT--LCGT-PEYL-- 165
Query: 159 GRVTPESVV----------YSFGTMLLDLLSGKHIPP 185
PE + ++ G ++ ++L G PP
Sbjct: 166 ---APEVIQSKGHNKAVDWWALGILIYEMLVG--YPP 197
|
Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyte/macrophage lineage differentiation, renal cell epithelial migration, and tubular morphogenesis in the developing kidney. Length = 291 |
| >gnl|CDD|173631 cd05045, PTKc_RET, Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein | Back alignment and domain information |
|---|
Score = 41.1 bits (96), Expect = 7e-04
Identities = 45/227 (19%), Positives = 95/227 (41%), Gaps = 32/227 (14%)
Query: 24 SSDLGETLNLEEAKAVGNLRSE-RLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQ 82
S D L +E AK G+LRS R + +G Y + + +L + + +
Sbjct: 73 SQDGPLLLIVEYAK-YGSLRSFLRESRKVGPSYLGSD---------GNRNSSYLDNPDER 122
Query: 83 PMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGK 142
+ + A +++ ++Y + + ++ DL A +L + ++S FGL ++ +
Sbjct: 123 ALTMGDLISFAWQISRGMQYLAEM-KLVHRDLAARNVLVAEGRKMKISDFGLSRDVYEED 181
Query: 143 SYSTN------LAFTPPEYMRTGRVTPESVVYSFGTMLLDLLS-GKH----IPPSHALDL 191
SY + + E + T +S V+SFG +L ++++ G + I P +L
Sbjct: 182 SYVKRSKGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIAPERLFNL 241
Query: 192 IRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERPNAKSL 238
+++ + ++ E E+ L C + E +RP +
Sbjct: 242 LKTGYRMERPENCSE---------EMYNLMLTCWKQEPDKRPTFADI 279
|
Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leading to autophosphorylation, activation, and intracellular signaling. RET is essential for the development of the sympathetic, parasympathetic and enteric nervous systems, and the kidney. RET disruption by germline mutations causes diseases in humans including congenital aganglionosis of the gastrointestinal tract (Hirschsprung's disease) and three related inherited cancers: multiple endocrine neoplasia type 2A (MEN2A), MEN2B, and familial medullary thyroid carcinoma (FMTC). Length = 290 |
| >gnl|CDD|173711 cd05621, STKc_ROCK2, Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2 | Back alignment and domain information |
|---|
Score = 41.2 bits (96), Expect = 8e-04
Identities = 39/138 (28%), Positives = 63/138 (45%), Gaps = 14/138 (10%)
Query: 53 CCYEADERL-LVAEFMPNETLAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALY 111
C ++ D+ L +V E+MP L + +++ P KWA + LA L+ S G ++
Sbjct: 110 CAFQDDKYLYMVMEYMPGGDLVNLMSNYDV-PEKWAKFYTAEVVLA--LDAIHSMG-LIH 165
Query: 112 HDLNAYRILFDKDGNPRLSSFGL-MKNSRDGKSYSTNLAFTP----PEYMRT----GRVT 162
D+ +L DK G+ +L+ FG MK G TP PE +++ G
Sbjct: 166 RDVKPDNMLLDKHGHLKLADFGTCMKMDETGMVRCDTAVGTPDYISPEVLKSQGGDGYYG 225
Query: 163 PESVVYSFGTMLLDLLSG 180
E +S G L ++L G
Sbjct: 226 RECDWWSVGVFLFEMLVG 243
|
Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found to play a role in stress fiber and focal adhesion formation. It is prominently expressed in the brain, heart, and skeletal muscles. It is implicated in vascular and neurological disorders, such as hypertension and vasospasm of the coronary and cerebral arteries. ROCK2 is also activated by caspase-2 cleavage, resulting in thrombin-induced microparticle generation in response to cell activation. Mice deficient in ROCK2 show intrauterine growth retardation and embryonic lethality because of placental dysfunction. Length = 370 |
| >gnl|CDD|173708 cd05617, STKc_aPKC_zeta, Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta | Back alignment and domain information |
|---|
Score = 40.8 bits (95), Expect = 9e-04
Identities = 33/136 (24%), Positives = 61/136 (44%), Gaps = 14/136 (10%)
Query: 54 CYEADERL-LVAEFMPNETLAKHLFHWETQPMKWAMRLRVALYLAQ---ALEYCSSKGRA 109
C++ RL LV E++ L H+ P + A Y A+ AL + +G
Sbjct: 64 CFQTTSRLFLVIEYVNGGDLMFHMQRQRKLPEEHAR-----FYAAEICIALNFLHERG-I 117
Query: 110 LYHDLNAYRILFDKDGNPRLSSFGLMKNS-RDGKSYSTNLA---FTPPEYMRTGRVTPES 165
+Y DL +L D DG+ +L+ +G+ K G + ST + PE +R
Sbjct: 118 IYRDLKLDNVLLDADGHIKLTDYGMCKEGLGPGDTTSTFCGTPNYIAPEILRGEEYGFSV 177
Query: 166 VVYSFGTMLLDLLSGK 181
++ G ++ ++++G+
Sbjct: 178 DWWALGVLMFEMMAGR 193
|
Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways. PKC-zeta also plays a central role in maintaining cell polarity in yeast and mammalian cells. In addition, it affects actin remodeling in muscle cells. Length = 327 |
| >gnl|CDD|132946 cd06615, PKc_MEK, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase | Back alignment and domain information |
|---|
Score = 40.5 bits (95), Expect = 0.001
Identities = 49/221 (22%), Positives = 84/221 (38%), Gaps = 60/221 (27%)
Query: 82 QPMKWAMRL------RVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGL- 134
Q +K A R+ ++++ + + L Y K + ++ D+ IL + G +L FG+
Sbjct: 88 QVLKKAGRIPENILGKISIAVLRGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVS 147
Query: 135 ------MKNSRDG-KSYSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKH-IPP- 185
M NS G +SY + PE ++ T +S ++S G L+++ G++ IPP
Sbjct: 148 GQLIDSMANSFVGTRSYMS------PERLQGTHYTVQSDIWSLGLSLVEMAIGRYPIPPP 201
Query: 186 --------------------------SHALDLIRSKNFLLLMDSALE--------GHFSN 211
H D R L+D + G FS
Sbjct: 202 DAKELEAMFGRPVSEGEAKESHRPVSGHPPDSPRPMAIFELLDYIVNEPPPKLPSGAFS- 260
Query: 212 DEGTELVRLASRCLQSEARERPNAKSLVISLMSLQKEAEQV 252
E +CL+ +ER + K L + E E+V
Sbjct: 261 ---DEFQDFVDKCLKKNPKERADLKELTKHPFIKRAELEEV 298
|
Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the downstream targets, ERK(extracellular signal-regulated kinase) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK1/2, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. This cascade has also been implicated in synaptic plasticity, migration, morphological determination, and stress response immunological reactions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK1/2, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. Length = 308 |
| >gnl|CDD|173634 cd05053, PTKc_FGFR, Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors | Back alignment and domain information |
|---|
Score = 40.5 bits (95), Expect = 0.001
Identities = 53/235 (22%), Positives = 94/235 (40%), Gaps = 43/235 (18%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFM--------------PNETLAKHLFH 78
+E K +G + + + NL+G C + +V E+ P E +
Sbjct: 66 MEMMKMIG--KHKNIINLLGVCTQEGPLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPR 123
Query: 79 WETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNS 138
+ + + A +A+ +E+ +SK + ++ DL A +L +D +++ FGL ++
Sbjct: 124 PPEETLTQKDLVSFAYQVARGMEFLASK-KCIHRDLAARNVLVTEDHVMKIADFGLARDI 182
Query: 139 RDGKSY--STN----LAFTPPEYMRTGRVTPESVVYSFGTMLLDL--LSGKHIP--PSHA 188
Y +TN + + PE + T +S V+SFG +L ++ L G P P
Sbjct: 183 HHIDYYRKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVEE 242
Query: 189 L-DLIRSKNFLLLMDSALEGHFSNDEGT---ELVRLASRCLQSEARERPNAKSLV 239
L L++ EG+ EL L C +RP K LV
Sbjct: 243 LFKLLK------------EGYRMEKPQNCTQELYHLMRDCWHEVPSQRPTFKQLV 285
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation, and intracellular signaling. There are at least 23 FGFs and four types of FGFRs. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. FGF/FGFR signaling is important in the regulation of embryonic development, homeostasis, and regenerative processes. Depending on the cell type and stage, FGFR signaling produces diverse cellular responses including proliferation, growth arrest, differentiation, and apoptosis. Aberrant signaling leads to many human diseases such as skeletal, olfactory, and metabolic disorders, as well as cancer. Length = 293 |
| >gnl|CDD|222112 pfam13414, TPR_11, TPR repeat | Back alignment and domain information |
|---|
Score = 37.3 bits (87), Expect = 0.001
Identities = 17/64 (26%), Positives = 30/64 (46%), Gaps = 2/64 (3%)
Query: 323 KKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYL-MNDMPQEALGDAMQAQ 381
K G+ F+ D+ AI+ Y + ++ + Y L+YL + +EAL D +A
Sbjct: 7 KNLGNALFKLGDYDEAIEAYEKALELDPD-NAEAYYNLALAYLKLGKDYEEALEDLEKAL 65
Query: 382 VVSP 385
+ P
Sbjct: 66 ELDP 69
|
Length = 69 |
| >gnl|CDD|173666 cd05575, STKc_SGK, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase | Back alignment and domain information |
|---|
Score = 40.5 bits (95), Expect = 0.001
Identities = 30/102 (29%), Positives = 45/102 (44%), Gaps = 7/102 (6%)
Query: 93 ALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLAFTP 152
A +A AL Y S +Y DL IL D G+ L+ FGL K + ++ TP
Sbjct: 102 AAEIASALGYLHSL-NIIYRDLKPENILLDSQGHVVLTDFGLCKEGIEHSKTTSTFCGTP 160
Query: 153 ----PEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALD 190
PE +R + G +L ++L G +PP ++ D
Sbjct: 161 EYLAPEVLRKQPYDRTVDWWCLGAVLYEMLYG--LPPFYSRD 200
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell proliferation, and apoptosis. Length = 323 |
| >gnl|CDD|173702 cd05611, STKc_Rim15_like, Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 40.2 bits (94), Expect = 0.001
Identities = 41/174 (23%), Positives = 72/174 (41%), Gaps = 28/174 (16%)
Query: 32 NLEEAKAVGNLRSER-----------LANLIGCCYEADERLLVAEFMPN---ETLAKHLF 77
++ V N+++ER +A L D LV E++ +L K L
Sbjct: 33 DMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQSKDYLYLVMEYLNGGDCASLIKTL- 91
Query: 78 HWETQPMKWAMRLRVALYLAQ---ALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGL 134
P WA + Y+A+ +E +G ++ D+ +L D+ G+ +L+ FGL
Sbjct: 92 --GGLPEDWAKQ-----YIAEVVLGVEDLHQRG-IIHRDIKPENLLIDQTGHLKLTDFGL 143
Query: 135 MKNSRDGKSYSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHA 188
+N + K + + PE + S +S G ++ + L G PP HA
Sbjct: 144 SRNGLENKKFVGTPDYLAPETILGVGDDKMSDWWSLGCVIFEFLFG--YPPFHA 195
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a downstream effector of PKA and regulates entry into stationary phase (G0). Thus, it plays a crucial role in regulating yeast proliferation, differentiation, and aging. Cek1 may facilitate progression of mitotic anaphase. Length = 260 |
| >gnl|CDD|133221 cd05090, PTKc_Ror1, Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1 | Back alignment and domain information |
|---|
Score = 40.4 bits (94), Expect = 0.001
Identities = 39/166 (23%), Positives = 69/166 (41%), Gaps = 21/166 (12%)
Query: 90 LRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTN-- 147
L +A+ +A +EY SS ++ DL A IL + + ++S GL + Y
Sbjct: 127 LHIAIQIAAGMEYLSSH-FFVHKDLAARNILIGEQLHVKISDLGLSREIYSADYYRVQPK 185
Query: 148 ----LAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIP-----PSHALDLIRSKNFL 198
+ + PPE + G+ + +S ++SFG +L ++ S P ++++R + L
Sbjct: 186 SLLPIRWMPPEAIMYGKFSSDSDIWSFGVVLWEIFSFGLQPYYGFSNQEVIEMVRKRQLL 245
Query: 199 LLMDSALEGHFSNDEGTELVRLASRCLQSEARERPNAKSLVISLMS 244
S D + L + C Q RP K + L S
Sbjct: 246 PC---------SEDCPPRMYSLMTECWQEGPSRRPRFKDIHTRLRS 282
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror kinases are expressed in many tissues during development. Avian Ror1 was found to be involved in late limb development. Studies in mice reveal that Ror1 is important in the regulation of neurite growth in central neurons, as well as in respiratory development. Loss of Ror1 also enhances the heart and skeletal abnormalities found in Ror2-deficient mice. Length = 283 |
| >gnl|CDD|133187 cd05056, PTKc_FAK, Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase | Back alignment and domain information |
|---|
Score = 40.1 bits (94), Expect = 0.001
Identities = 53/227 (23%), Positives = 80/227 (35%), Gaps = 36/227 (15%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQPMKWAMRLRV 92
L+EA + + LIG E + +V E P L +L +
Sbjct: 55 LQEAYIMRQFDHPHIVKLIGVITE-NPVWIVMELAPLGELRSYL----QVNKYSLDLASL 109
Query: 93 ALYLAQ---ALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLA 149
LY Q AL Y SK R ++ D+ A +L +L FGL + D Y +
Sbjct: 110 ILYSYQLSTALAYLESK-RFVHRDIAARNVLVSSPDCVKLGDFGLSRYLEDESYYKASKG 168
Query: 150 FTP-----PEYMRTGRVTPESVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKNFLLLMDS 203
P PE + R T S V+ FG + ++L G K F + ++
Sbjct: 169 KLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMLGV-------------KPFQGVKNN 215
Query: 204 ALEGHFSNDE--------GTELVRLASRCLQSEARERPNAKSLVISL 242
+ G N E L L ++C + +RP L L
Sbjct: 216 DVIGRIENGERLPMPPNCPPTLYSLMTKCWAYDPSKRPRFTELKAQL 262
|
Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions and at growth factor receptors. Through diverse molecular interactions, FAK functions as a biosensor or integrator to control cell motility. It is a key regulator of cell survival, proliferation, migration and invasion, and thus plays an important role in the development and progression of cancer. Src binds to autophosphorylated FAK forming the FAK-Src dual kinase complex, which is activated in a wide variety of tumor cells and generates signals promoting growth and metastasis. FAK is being developed as a target for cancer therapy. Length = 270 |
| >gnl|CDD|132981 cd06650, PKc_MEK1, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1 | Back alignment and domain information |
|---|
Score = 40.4 bits (94), Expect = 0.001
Identities = 33/140 (23%), Positives = 63/140 (45%), Gaps = 9/140 (6%)
Query: 91 RVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRD--GKSYSTNL 148
+V++ + + L Y K + ++ D+ IL + G +L FG+ D S+
Sbjct: 107 KVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTR 166
Query: 149 AFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKH-IPPSHALDLIRSKNFLLLMDSALEG 207
++ PE ++ + +S ++S G L+++ G++ IPP A K L+ +EG
Sbjct: 167 SYMSPERLQGTHYSVQSDIWSMGLSLVEMAIGRYPIPPPDA------KELELMFGCPVEG 220
Query: 208 HFSNDEGTELVRLASRCLQS 227
+ E + R R L S
Sbjct: 221 DPAESETSPRPRPPGRPLSS 240
|
Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downstream targets, extracellular signal-regulated kinase (ERK) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK1, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK1, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. MEK1 also plays a role in cell cycle control. Length = 333 |
| >gnl|CDD|132960 cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases | Back alignment and domain information |
|---|
Score = 40.2 bits (94), Expect = 0.001
Identities = 27/92 (29%), Positives = 46/92 (50%), Gaps = 9/92 (9%)
Query: 98 QALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLA------FT 151
+ L Y SKG L+ DL A +L D DG ++S FG+ K S D N++ +
Sbjct: 119 EGLAYLHSKG-ILHRDLKADNLLVDADGICKISDFGISKKSDDIYDNDQNMSMQGSVFWM 177
Query: 152 PPEYMRTGRVTPESVV--YSFGTMLLDLLSGK 181
PE + + + V +S G ++L++ +G+
Sbjct: 178 APEVIHSYSQGYSAKVDIWSLGCVVLEMFAGR 209
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell integrity MAPK pathway, which is activated by stresses and aggressions to the cell wall. The MAPKKK Bck1, MAPKKs Mkk1 and Mkk2, and the MAPK Slt2 make up the cascade that is important in the maintenance of cell wall homeostasis. Fission yeast Mkh1 is involved in MAPK cascades regulating cell morphology, cell wall integrity, salt resistance, and filamentous growth in response to stress. Length = 272 |
| >gnl|CDD|173679 cd05588, STKc_aPKC, Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C | Back alignment and domain information |
|---|
Score = 40.2 bits (94), Expect = 0.001
Identities = 40/141 (28%), Positives = 69/141 (48%), Gaps = 24/141 (17%)
Query: 54 CYEADERL-LVAEFMPNETLAKHLFHWETQ---PMKWAMRLRVALYLAQ---ALEYCSSK 106
C++ + RL V EF+ L +FH + Q P + A Y A+ AL + +
Sbjct: 64 CFQTESRLFFVIEFVSGGDL---MFHMQRQRKLPEEHAR-----FYSAEISLALNFLHER 115
Query: 107 GRALYHDLNAYRILFDKDGNPRLSSFGLMK-NSRDGKSYSTNLAFTP----PEYMRTGRV 161
G +Y DL +L D +G+ +L+ +G+ K R G + ST TP PE +R G
Sbjct: 116 G-IIYRDLKLDNVLLDAEGHIKLTDYGMCKEGIRPGDTTST-FCGTPNYIAPEILR-GED 172
Query: 162 TPESV-VYSFGTMLLDLLSGK 181
SV ++ G ++ ++++G+
Sbjct: 173 YGFSVDWWALGVLMFEMMAGR 193
|
Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions including proliferation, migration, apoptosis, polarity maintenance and cytoskeletal regulation. They also play a critical role in the regulation of glucose metabolism and in the pathogenesis of type 2 diabetes. Length = 329 |
| >gnl|CDD|173753 cd07864, STKc_CDK12, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12 | Back alignment and domain information |
|---|
Score = 40.1 bits (94), Expect = 0.001
Identities = 41/132 (31%), Positives = 62/132 (46%), Gaps = 17/132 (12%)
Query: 62 LVAEFMPNE---TLAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYR 118
LV E+M ++ L L H+ +K M+ L + L YC K L+ D+
Sbjct: 93 LVFEYMDHDLMGLLESGLVHFSEDHIKSFMK-----QLLEGLNYCHKKN-FLHRDIKCSN 146
Query: 119 ILFDKDGNPRLSSFGLMK--NSRDGKSYSTN----LAFTPPEYMR-TGRVTPESVVYSFG 171
IL + G +L+ FGL + NS + + Y TN L + PPE + R P V+S G
Sbjct: 147 ILLNNKGQIKLADFGLARLYNSEESRPY-TNKVITLWYRPPELLLGEERYGPAIDVWSCG 205
Query: 172 TMLLDLLSGKHI 183
+L +L + K I
Sbjct: 206 CILGELFTKKPI 217
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely expressed in tissues. It interacts with cyclins L1 and L2, and plays roles in regulating transcription and alternative splicing. Length = 302 |
| >gnl|CDD|173684 cd05593, STKc_PKB_gamma, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma | Back alignment and domain information |
|---|
Score = 40.1 bits (93), Expect = 0.001
Identities = 37/169 (21%), Positives = 72/169 (42%), Gaps = 11/169 (6%)
Query: 18 KSSVLESSDLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLF 77
K ++ ++ TL E++ + N R L +L D V E++ L F
Sbjct: 30 KEVIIAKDEVAHTLT--ESRVLKNTRHPFLTSLKYSFQTKDRLCFVMEYVNGGEL---FF 84
Query: 78 HWETQPMKWAMRLRV-ALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMK 136
H + + R R + AL+Y S G+ +Y DL ++ DKDG+ +++ FGL K
Sbjct: 85 HLSRERVFSEDRTRFYGAEIVSALDYLHS-GKIVYRDLKLENLMLDKDGHIKITDFGLCK 143
Query: 137 ----NSRDGKSYSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGK 181
++ K++ + PE + + G ++ +++ G+
Sbjct: 144 EGITDAATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 192
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulated in estrogen-deficient breast cancer cells, androgen-independent prostate cancer cells, and primary ovarian tumors. It acts as a key mediator in the genesis of ovarian cancer. Length = 328 |
| >gnl|CDD|173696 cd05605, STKc_GRK4_like, Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 39.8 bits (93), Expect = 0.001
Identities = 39/161 (24%), Positives = 66/161 (40%), Gaps = 12/161 (7%)
Query: 28 GETLNLEEAKAVGNLRSERLANLIGCCYEADERL-LVAEFMPNETLAKHLFHWETQPMKW 86
GE + L E + + + S + +L YE + L LV M L H+++
Sbjct: 43 GEAMALNEKQILEKVNSRFVVSL-AYAYETKDALCLVLTLMNGGDLKFHIYNMGNPGFDE 101
Query: 87 AMRLRVALYLAQ---ALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG-- 141
R Y A+ LE + R +Y DL IL D G+ R+S GL +G
Sbjct: 102 E---RAVFYAAEITCGLEDLHRE-RIVYRDLKPENILLDDYGHIRISDLGLAVEIPEGET 157
Query: 142 -KSYSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGK 181
+ + + PE ++ R T + G ++ +++ GK
Sbjct: 158 IRGRVGTVGYMAPEVVKNERYTFSPDWWGLGCLIYEMIEGK 198
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5, GRK6, and similar GRKs. GRKs in this group contain an N-terminal RGS homology (RH) domain and a catalytic domain, but lack a G protein betagamma-subunit binding domain. They are localized to the plasma membrane through post-translational lipid modification or direct binding to PIP2. Length = 285 |
| >gnl|CDD|173732 cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases | Back alignment and domain information |
|---|
Score = 39.8 bits (93), Expect = 0.001
Identities = 25/95 (26%), Positives = 49/95 (51%), Gaps = 11/95 (11%)
Query: 98 QALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMK----NSRDGK------SYSTN 147
+ L Y ++G ++ D+ IL D G ++S FG+ K NS K S +
Sbjct: 117 KGLNYLHNRG-IIHRDIKGANILVDNKGGIKISDFGISKKLEANSLSTKTNGARPSLQGS 175
Query: 148 LAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKH 182
+ + PE ++ T ++ ++S G +++++L+GKH
Sbjct: 176 VFWMAPEVVKQTSYTRKADIWSLGCLVVEMLTGKH 210
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Byr2 is regulated by Ras1. It responds to pheromone signaling and controls mating through the MAPK pathway. Budding yeast Ste11 functions in MAPK cascades that regulate mating, high osmolarity glycerol, and filamentous growth responses. Length = 267 |
| >gnl|CDD|173712 cd05622, STKc_ROCK1, Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1 | Back alignment and domain information |
|---|
Score = 40.0 bits (93), Expect = 0.002
Identities = 39/134 (29%), Positives = 63/134 (47%), Gaps = 15/134 (11%)
Query: 58 DERLL--VAEFMPNETLAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLN 115
D+R L V E+MP L + +++ P KWA + LA L+ S G ++ D+
Sbjct: 114 DDRYLYMVMEYMPGGDLVNLMSNYDV-PEKWARFYTAEVVLA--LDAIHSMG-FIHRDVK 169
Query: 116 AYRILFDKDGNPRLSSFGL-MKNSRDGKSYSTNLAFTP----PEYMRT----GRVTPESV 166
+L DK G+ +L+ FG MK +++G TP PE +++ G E
Sbjct: 170 PDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECD 229
Query: 167 VYSFGTMLLDLLSG 180
+S G L ++L G
Sbjct: 230 WWSVGVFLYEMLVG 243
|
Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, and kidney. It mediates signaling from Rho to the actin cytoskeleton. It is implicated in the development of cardiac fibrosis, cardiomyocyte apoptosis, and hyperglycemia. Mice deficient with ROCK1 display eyelids open at birth (EOB) and omphalocele phenotypes due to the disorganization of actin filaments in the eyelids and the umbilical ring. Length = 371 |
| >gnl|CDD|173655 cd05110, PTKc_HER4, Catalytic domain of the Protein Tyrosine Kinase, HER4 | Back alignment and domain information |
|---|
Score = 40.0 bits (93), Expect = 0.002
Identities = 34/153 (22%), Positives = 72/153 (47%), Gaps = 9/153 (5%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQPMKWAMRLRV 92
++EA + ++ L L+G C +L V + MP+ L ++ H + + L
Sbjct: 57 MDEALIMASMDHPHLVRLLGVCLSPTIQL-VTQLMPHGCLLDYV-HEHKDNIGSQLLLNW 114
Query: 93 ALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMK-NSRDGKSYSTNLAFT 151
+ +A+ + Y + R ++ DL A +L + +++ FGL + D K Y+ +
Sbjct: 115 CVQIAKGMMYLEER-RLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKM 173
Query: 152 PPEYM-----RTGRVTPESVVYSFGTMLLDLLS 179
P ++M + T +S V+S+G + +L++
Sbjct: 174 PIKWMALECIHYRKFTHQSDVWSYGVTIWELMT 206
|
Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Ligands that bind HER4 fall into two groups, the neuregulins (or heregulins) and some EGFR (HER1) ligands including betacellulin, HBEGF, and epiregulin. All four neuregulins (NRG1-4) interact with HER4. Upon ligand binding, HER4 forms homo- or heterodimers with other HER proteins. HER4 is essential in embryonic development. It is implicated in mammary gland, cardiac, and neural development. As a postsynaptic receptor of NRG1, HER4 plays an important role in synaptic plasticity and maturation. The impairment of NRG1/HER4 signaling may contribute to schizophrenia. Length = 303 |
| >gnl|CDD|173723 cd06605, PKc_MAPKK, Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase | Back alignment and domain information |
|---|
Score = 39.6 bits (93), Expect = 0.002
Identities = 34/158 (21%), Positives = 66/158 (41%), Gaps = 17/158 (10%)
Query: 91 RVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRD--GKSYSTNL 148
++A+ + + L Y K + ++ D+ IL + G +L FG+ + K++
Sbjct: 104 KIAVAVLKGLTYLHEKHKIIHRDVKPSNILVNSRGQIKLCDFGVSGQLVNSLAKTFVGTS 163
Query: 149 AFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALE-- 206
++ PE ++ + +S ++S G L++L +G+ P L+ +
Sbjct: 164 SYMAPERIQGNDYSVKSDIWSLGLSLIELATGRFPYPPENDP---PDGIFELLQYIVNEP 220
Query: 207 ------GHFSNDEGTELVRLASRCLQSEARERPNAKSL 238
G FS D + CL + RERP+ K L
Sbjct: 221 PPRLPSGKFSPD----FQDFVNLCLIKDPRERPSYKEL 254
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity PKs that phosphorylate their downstream targets, MAPKs, at specific threonine and tyrosine residues. There are three MAPK subfamilies: extracellular signal-regulated kinase (ERK), c-Jun N-terminal kinase (JNK), and p38. In mammalian cells, there are seven MAPKKs (named MKK1-7) and 20 MAPKKKs. Each MAPK subfamily can be activated by at least two cognate MAPKKs and by multiple MAPKKKs. Length = 265 |
| >gnl|CDD|173661 cd05570, STKc_PKC, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C | Back alignment and domain information |
|---|
Score = 39.7 bits (93), Expect = 0.002
Identities = 36/145 (24%), Positives = 64/145 (44%), Gaps = 14/145 (9%)
Query: 53 CCYEADERL-LVAEFMPNETLAKHLFHWETQPMKWAMRLRV-ALYLAQALEYCSSKGRAL 110
C++ +RL V E++ L +FH + R R A + L++ +G +
Sbjct: 63 SCFQTKDRLFFVMEYVNGGDL---MFHIQRSGRFDEPRARFYAAEIVLGLQFLHERG-II 118
Query: 111 YHDLNAYRILFDKDGNPRLSSFGLMK-NSRDGKSYSTNLAFTP----PEYMRTGRVTPES 165
Y DL +L D +G+ +++ FG+ K G + ST TP PE + P
Sbjct: 119 YRDLKLDNVLLDSEGHIKIADFGMCKEGILGGVTTST-FCGTPDYIAPEILSYQPYGPAV 177
Query: 166 VVYSFGTMLLDLLSGKHIPPSHALD 190
++ G +L ++L+G+ P D
Sbjct: 178 DWWALGVLLYEMLAGQ--SPFEGDD 200
|
Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only require PS. PKCs phosphorylate and modify the activities of a wide variety of cellular proteins including receptors, enzymes, cytoskeletal proteins, transcription factors, and other kinases. They play a central role in signal transduction pathways that regulate cell migration and polarity, proliferation, differentiation, and apoptosis. Also included in this subfamily are the PKC-like proteins, called PKNs. Length = 318 |
| >gnl|CDD|173682 cd05591, STKc_nPKC_epsilon, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon | Back alignment and domain information |
|---|
Score = 39.8 bits (93), Expect = 0.002
Identities = 36/144 (25%), Positives = 64/144 (44%), Gaps = 16/144 (11%)
Query: 53 CCYEADERLL-VAEFMPNETLAKHLFHWETQPMKWAMRLRVALYLAQ---ALEYCSSKGR 108
CC++ +RL V E++ L ++ Q + R Y A+ AL + G
Sbjct: 63 CCFQTKDRLFFVMEYVNGGDLM-----FQIQRSRKFDEPRSRFYAAEVTLALMFLHRHG- 116
Query: 109 ALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLAFTP----PEYMRTGRVTPE 164
+Y DL IL D +G+ +L+ FG+ K +T TP PE ++ P
Sbjct: 117 VIYRDLKLDNILLDAEGHCKLADFGMCKEGILNGVTTTTFCGTPDYIAPEILQELEYGPS 176
Query: 165 SVVYSFGTMLLDLLSGKHIPPSHA 188
++ G ++ ++++G+ PP A
Sbjct: 177 VDWWALGVLMYEMMAGQ--PPFEA 198
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to neoplastic transformation depending on the cell type. It contributes to oncogenesis by inducing disordered cell growth and inhibiting cell death. It also plays a role in tumor invasion and metastasis. PKC-epsilon has also been found to confer cardioprotection against ischemia and reperfusion-mediated damage. Other cellular functions include the regulation of gene expression, cell adhesion, and cell motility. Length = 321 |
| >gnl|CDD|173675 cd05584, STKc_p70S6K, Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase | Back alignment and domain information |
|---|
Score = 39.8 bits (93), Expect = 0.002
Identities = 32/104 (30%), Positives = 49/104 (47%), Gaps = 22/104 (21%)
Query: 95 YLAQ---ALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLAFT 151
YL++ ALE+ +G +Y DL IL D G+ +L+ FGL K S + + T
Sbjct: 105 YLSEISLALEHLHQQG-IIYRDLKPENILLDAQGHVKLTDFGLCKESIHEGTVTHTFCGT 163
Query: 152 PPEYMRTGRVTPESVV----------YSFGTMLLDLLSGKHIPP 185
EYM PE ++ +S G ++ D+L+G PP
Sbjct: 164 -IEYM-----APEILMRSGHGKAVDWWSLGALMYDMLTGA--PP 199
|
Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the insulin receptor substrate IRS-1, among others. Mammals contain two isoforms of p70S6K, named S6K1 and S6K2 (or S6K-beta). Length = 323 |
| >gnl|CDD|133191 cd05060, PTKc_Syk_like, Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 39.3 bits (92), Expect = 0.002
Identities = 42/175 (24%), Positives = 73/175 (41%), Gaps = 11/175 (6%)
Query: 12 WFHCHLKSSVLESSDLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNET 71
+K+ E G+ L EA + L + LIG C + + +LV E P
Sbjct: 23 EVEVAVKTLKQEHIAAGKKEFLREASVMAQLDHPCIVRLIGVC-KGEPLMLVMELAPLGP 81
Query: 72 LAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSS 131
L K+L + + + + +A +A + Y SK ++ DL A +L ++S
Sbjct: 82 LLKYLK--KRREIPVSDLKELAHQVAMGMAYLESK-HFVHRDLAARNVLLVNRHQAKISD 138
Query: 132 FGLMKNSRDGKSYSTN-------LAFTPPEYMRTGRVTPESVVYSFGTMLLDLLS 179
FG+ + G Y L + PE + G+ + +S V+S+G L + S
Sbjct: 139 FGMSRALGAGSDYYRATTAGRWPLKWYAPECINYGKFSSKSDVWSYGVTLWEAFS 193
|
Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, migration, and phagocytosis. Syk is important in B-cell receptor (BCR) signaling, while Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Syk also plays a central role in Fc receptor-mediated phagocytosis in the adaptive immune system. Shark is exclusively expressed in ectodermally derived epithelia, and is localized preferentially to the apical surface of the epithelial cells, it may play a role in a signaling pathway for epithelial cell polarity. Length = 257 |
| >gnl|CDD|173672 cd05581, STKc_PDK1, Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1 | Back alignment and domain information |
|---|
Score = 39.5 bits (93), Expect = 0.002
Identities = 36/159 (22%), Positives = 63/159 (39%), Gaps = 36/159 (22%)
Query: 53 CCYEADERL-LVAEFMPNETLAKHLFHWETQPMKWAMRLRVALYLAQ---ALEYCSSKGR 108
++ +E L V E+ PN L +++ + + K Y A+ ALEY SKG
Sbjct: 69 YTFQDEENLYFVLEYAPNGELLQYIRKYGSLDEKCTR-----FYAAEILLALEYLHSKG- 122
Query: 109 ALYH-DLNAYRILFDKDGNPRLSSFG--------LMKNSRDGKSYSTNLA---------- 149
+ H DL IL DKD + +++ FG S G + + +
Sbjct: 123 -IIHRDLKPENILLDKDMHIKITDFGTAKVLDPNSSPESNKGDATNIDSQIEKNRRRFAS 181
Query: 150 ------FTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKH 182
+ PE + S +++ G ++ +L+GK
Sbjct: 182 FVGTAEYVSPELLNEKPAGKSSDLWALGCIIYQMLTGKP 220
|
Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to autophosphorylate and is constitutively active in mammalian cells. PDK1 is essential for normal embryo development and is important in regulating cell volume. Length = 280 |
| >gnl|CDD|88519 cd05618, STKc_aPKC_iota, Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota | Back alignment and domain information |
|---|
Score = 39.3 bits (91), Expect = 0.002
Identities = 30/133 (22%), Positives = 59/133 (44%), Gaps = 8/133 (6%)
Query: 54 CYEADERLL-VAEFMPNETLAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYH 112
C++ + RL V E++ L H+ P + A + LA L Y +G +Y
Sbjct: 64 CFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLA--LNYLHERG-IIYR 120
Query: 113 DLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLAFTP----PEYMRTGRVTPESVVY 168
DL +L D +G+ +L+ +G+ K ++ TP PE +R +
Sbjct: 121 DLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSTFCGTPNYIAPEILRGEDYGFSVDWW 180
Query: 169 SFGTMLLDLLSGK 181
+ G ++ ++++G+
Sbjct: 181 ALGVLMFEMMAGR 193
|
Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target of tumor-specific gene amplification in many human cancers, and has been identified as a human oncogene. In addition to its role in transformed growth, PKC-iota also promotes invasion, chemoresistance, and tumor cell survival. Expression profiling of PKC-iota is a prognostic marker of poor clinical outcome in several human cancers. PKC-iota also plays a role in establishing cell polarity, and has critical embryonic functions. Length = 329 |
| >gnl|CDD|173695 cd05604, STKc_SGK3, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3 | Back alignment and domain information |
|---|
Score = 39.2 bits (91), Expect = 0.003
Identities = 49/172 (28%), Positives = 70/172 (40%), Gaps = 17/172 (9%)
Query: 31 LNLEEAKAVGNLRSERLAN-----LIGCCYE---ADERLLVAEFMPNETLAKHLFHWETQ 82
LN +E K + R+ L N L+G Y ++ V +F+ L HL +
Sbjct: 34 LNRKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTTEKLYFVLDFVNGGELFFHLQRERSF 93
Query: 83 PMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGK 142
P A R A +A AL Y S +Y DL IL D G+ L+ FGL K
Sbjct: 94 PEPRA-RFYAA-EIASALGYLHSI-NIVYRDLKPENILLDSQGHVVLTDFGLCKEGIAQS 150
Query: 143 SYSTNLAFTP----PEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALD 190
+T TP PE +R + G +L ++L G +PP + D
Sbjct: 151 DTTTTFCGTPEYLAPEVIRKQPYDNTVDWWCLGAVLYEMLYG--LPPFYCRD 200
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels, and receptors. It plays a critical role in hair follicle morphogenesis and hair cycling. Length = 325 |
| >gnl|CDD|173685 cd05594, STKc_PKB_alpha, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha | Back alignment and domain information |
|---|
Score = 39.2 bits (91), Expect = 0.003
Identities = 36/142 (25%), Positives = 65/142 (45%), Gaps = 12/142 (8%)
Query: 96 LAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNS-RDG---KSYSTNLAFT 151
+ AL+Y S+ +Y DL ++ DKDG+ +++ FGL K +DG K++ +
Sbjct: 104 IVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFCGTPEYL 163
Query: 152 PPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNF-LLLMDSALEGHFS 210
PE + + G ++ +++ G+ P + D K F L+LM+ E F
Sbjct: 164 APEVLEDNDYGRAVDWWGLGVVMYEMMCGRL--PFYNQD--HEKLFELILME---EIRFP 216
Query: 211 NDEGTELVRLASRCLQSEARER 232
E L S L+ + ++R
Sbjct: 217 RTLSPEAKSLLSGLLKKDPKQR 238
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficient in PKB-alpha exhibit perinatal morbidity, growth retardation, reduction in body weight accompanied by reduced sizes of multiple organs, and enhanced apoptosis in some cell types. PKB-alpha activity has been reported to be frequently elevated in breast and prostate cancers. In some cancer cells, PKB-alpha may act as a suppressor of metastasis. Length = 325 |
| >gnl|CDD|133192 cd05061, PTKc_InsR, Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor | Back alignment and domain information |
|---|
Score = 39.2 bits (91), Expect = 0.003
Identities = 41/175 (23%), Positives = 76/175 (43%), Gaps = 16/175 (9%)
Query: 20 SVLESSDLGETLN-LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFH 78
+V ES+ L E + L EA + + L+G + L+V E M + L +L
Sbjct: 43 TVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRS 102
Query: 79 W----ETQPMKWAMRLR----VALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLS 130
E P + L+ +A +A + Y ++K + ++ DL A + D ++
Sbjct: 103 LRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAK-KFVHRDLAARNCMVAHDFTVKIG 161
Query: 131 SFGLMKN------SRDGKSYSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLS 179
FG+ ++ R G + + PE ++ G T S ++SFG +L ++ S
Sbjct: 162 DFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS 216
|
Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein metabolism, ion and amino acid transport, cell cycle and proliferation, cell differentiation, gene transcription, and nitric oxide synthesis. Insulin resistance, caused by abnormalities in InsR signaling, has been described in diabetes, hypertension, cardiovascular disease, metabolic syndrome, heart failure, and female infertility. Length = 288 |
| >gnl|CDD|173707 cd05616, STKc_cPKC_beta, Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta | Back alignment and domain information |
|---|
Score = 39.2 bits (91), Expect = 0.003
Identities = 32/140 (22%), Positives = 62/140 (44%), Gaps = 17/140 (12%)
Query: 54 CYEADERL-LVAEFMPNETLAKHLFHW----ETQPMKWAMRLRVALYLAQALEYCSSKGR 108
C++ +RL V E++ L + E + +A + + L+ SKG
Sbjct: 69 CFQTMDRLYFVMEYVNGGDLMYQIQQVGRFKEPHAVFYAAEIAIGLFFLH------SKG- 121
Query: 109 ALYHDLNAYRILFDKDGNPRLSSFGLMK-NSRDG---KSYSTNLAFTPPEYMRTGRVTPE 164
+Y DL ++ D +G+ +++ FG+ K N DG K++ + PE +
Sbjct: 122 IIYRDLKLDNVMLDSEGHIKIADFGMCKENMWDGVTTKTFCGTPDYIAPEIIAYQPYGKS 181
Query: 165 SVVYSFGTMLLDLLSGKHIP 184
++FG +L ++L+G P
Sbjct: 182 VDWWAFGVLLYEMLAG-QAP 200
|
Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and gamma. The PKC beta isoforms (I and II), generated by alternative splicing of a single gene, are preferentially activated by hyperglycemia-induced DAG in retinal tissues. This is implicated in diabetic microangiopathy such as ischemia, neovascularization, and abnormal vasodilator function. PKC-beta also plays an important role in VEGF signaling. In addition, glucose regulates proliferation in retinal endothelial cells via PKC-betaI. PKC-beta is also being explored as a therapeutic target in cancer. It contributes to tumor formation and is involved in the tumor host mechanisms of inflammation and angiogenesis. Length = 323 |
| >gnl|CDD|133230 cd05099, PTKc_FGFR4, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4 | Back alignment and domain information |
|---|
Score = 39.2 bits (91), Expect = 0.003
Identities = 57/242 (23%), Positives = 101/242 (41%), Gaps = 42/242 (17%)
Query: 26 DLGETLN-LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHL-------- 76
DL + ++ +E K +G + + + NL+G C + ++ E+ L + L
Sbjct: 60 DLADLISEMELMKLIG--KHKNIINLLGVCTQEGPLYVIVEYAAKGNLREFLRARRPPGP 117
Query: 77 ------FHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLS 130
+ + + + A +A+ +EY S+ R ++ DL A +L +D +++
Sbjct: 118 DYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLESR-RCIHRDLAARNVLVTEDNVMKIA 176
Query: 131 SFGLMKNSRDGKSY--STN----LAFTPPEYMRTGRVTPESVVYSFGTMLLDL--LSGKH 182
FGL + D Y ++N + + PE + T +S V+SFG ++ ++ L G
Sbjct: 177 DFGLARGVHDIDYYKKTSNGRLPVKWMAPEALFDRVYTHQSDVWSFGILMWEIFTLGGSP 236
Query: 183 IP--PSHALDLIRSKNFLLLMDSALEGHFSNDEGT---ELVRLASRCLQSEARERPNAKS 237
P P L F LL EGH + EL L C + +RP K
Sbjct: 237 YPGIPVEEL-------FKLLR----EGHRMDKPSNCTHELYMLMRECWHAVPTQRPTFKQ 285
Query: 238 LV 239
LV
Sbjct: 286 LV 287
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. Unlike other FGFRs, there is only one splice form of FGFR4. It binds FGF1, FGF2, FGF6, FGF19, and FGF23. FGF19 is a selective ligand for FGFR4. Although disruption of FGFR4 in mice causes no obvious phenotype, in vivo inhibition of FGFR4 in cultured skeletal muscle cells resulted in an arrest of muscle progenitor differentiation. FGF6 and FGFR4 are uniquely expressed in myofibers and satellite cells. FGF6/FGFR4 signaling appears to play a key role in the regulation of muscle regeneration. A polymorphism in FGFR4 is found in head and neck squamous cell carcinoma. Length = 314 |
| >gnl|CDD|133194 cd05063, PTKc_EphR_A2, Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2 | Back alignment and domain information |
|---|
Score = 38.8 bits (90), Expect = 0.003
Identities = 40/156 (25%), Positives = 72/156 (46%), Gaps = 13/156 (8%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHL--FHWETQPMKWAMRL 90
L EA +G + L G + +++ E+M N L K+L E + L
Sbjct: 54 LSEASIMGQFSHHNIIRLEGVVTKFKPAMIITEYMENGALDKYLRDHDGEFSSYQLVGML 113
Query: 91 RVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGK--SYSTN- 147
R +A ++Y S ++ DL A IL + + ++S FGL + D +Y+T+
Sbjct: 114 R---GIAAGMKYLSDMNY-VHRDLAARNILVNSNLECKVSDFGLSRVLEDDPEGTYTTSG 169
Query: 148 ----LAFTPPEYMRTGRVTPESVVYSFGTMLLDLLS 179
+ +T PE + + T S V+SFG ++ +++S
Sbjct: 170 GKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMS 205
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. The EphA2 receptor is overexpressed in tumor cells and tumor blood vessels in a variety of cancers including breast, prostate, lung, and colon. As a result, it is an attractive target for drug design since its inhibition could affect several aspects of tumor progression. Length = 268 |
| >gnl|CDD|132943 cd06612, STKc_MST1_2, Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2 | Back alignment and domain information |
|---|
Score = 38.8 bits (91), Expect = 0.003
Identities = 37/149 (24%), Positives = 66/149 (44%), Gaps = 16/149 (10%)
Query: 98 QALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLAFTP----P 153
+ LEY S + ++ D+ A IL +++G +L+ FG+ D + + TP P
Sbjct: 110 KGLEYLHSN-KKIHRDIKAGNILLNEEGQAKLADFGVSGQLTDTMAKRNTVIGTPFWMAP 168
Query: 154 EYMRTGRVTPESVVYSFGTMLLDLLSGK----HIPPSHALDLIRSKNFLLLMDSALEGHF 209
E ++ ++ ++S G +++ GK I P A+ +I +K L D +
Sbjct: 169 EVIQEIGYNNKADIWSLGITAIEMAEGKPPYSDIHPMRAIFMIPNKPPPTLSDP---EKW 225
Query: 210 SNDEGTELVRLASRCLQSEARERPNAKSL 238
S E +CL + ERP+A L
Sbjct: 226 S----PEFNDFVKKCLVKDPEERPSAIQL 250
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a MAPK kinase) and MEKK1 (a MAPK kinase kinase) by acting as a MAPK kinase kinase kinase (MAPKKKK). Activation of JNK by MST1 leads to caspase activation and apoptosis. MST1 has also been implicated in cell proliferation and differentiation. Krs1 may regulate cell growth arrest and apoptosis in response to cellular stress. Length = 256 |
| >gnl|CDD|165291 PHA02988, PHA02988, hypothetical protein; Provisional | Back alignment and domain information |
|---|
Score = 38.6 bits (90), Expect = 0.003
Identities = 33/169 (19%), Positives = 69/169 (40%), Gaps = 17/169 (10%)
Query: 82 QPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG 141
+ + + +L +A+ + L Y +L + L ++ ++ GL K
Sbjct: 117 KDLSFKTKLDMAIDCCKGLYNLYKYTNKPYKNLTSVSFLVTENYKLKIICHGLEKILSSP 176
Query: 142 KSYSTN-LAFTPPEYMRT--GRVTPESVVYSFGTMLLDLLSGKHIPPSHA-----LDLIR 193
+ N + + + + T + +YS G +L ++ +GK IP + DLI
Sbjct: 177 PFKNVNFMVYFSYKMLNDIFSEYTIKDDIYSLGVVLWEIFTGK-IPFENLTTKEIYDLII 235
Query: 194 SKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERPNAKSLVISL 242
+KN L + L+ E+ + C ++ +RPN K ++ +L
Sbjct: 236 NKNNSLKLP--LDCP------LEIKCIVEACTSHDSIKRPNIKEILYNL 276
|
Length = 283 |
| >gnl|CDD|132949 cd06618, PKc_MKK7, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7 | Back alignment and domain information |
|---|
Score = 38.9 bits (91), Expect = 0.004
Identities = 38/156 (24%), Positives = 57/156 (36%), Gaps = 27/156 (17%)
Query: 99 ALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLAFTPPEYMRT 158
AL Y K ++ D+ IL D GN +L FG+ D K+ + + YM
Sbjct: 126 ALHYLKEKHGVIHRDVKPSNILLDASGNVKLCDFGISGRLVDSKAKTRSAGCAA--YMAP 183
Query: 159 GRVTPE---------SVVYSFGTMLLDLLSGKHIPPSH-------ALDLIRSKNFLLLMD 202
R+ P + V+S G L++L +G+ P L I + L
Sbjct: 184 ERIDPPDPNPKYDIRADVWSLGISLVELATGQF--PYKNCKTEFEVLTKILQEEPPSL-- 239
Query: 203 SALEGHFSNDEGTELVRLASRCLQSEARERPNAKSL 238
FS D CL + R+RP + L
Sbjct: 240 -PPNEGFSPD----FCSFVDLCLTKDHRKRPKYREL 270
|
Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates its downstream target, c-Jun N-terminal kinase (JNK), on specific threonine and tyrosine residues. Although MKK7 is capable of dual phosphorylation, it prefers to phosphorylate the threonine residue of JNK. Thus, optimal activation of JNK requires both MKK4 (not included in this subfamily) and MKK7. MKK7 is primarily activated by cytokines. MKK7 is essential for liver formation during embryogenesis. It plays roles in G2/M cell cycle arrest and cell growth. In addition, it is involved in the control of programmed cell death, which is crucial in oncogenesis, cancer chemoresistance, and antagonism to TNFalpha-induced killing, through its inhibition by Gadd45beta and the subsequent suppression of the JNK cascade. Length = 296 |
| >gnl|CDD|173636 cd05057, PTKc_EGFR_like, Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 38.6 bits (90), Expect = 0.004
Identities = 36/165 (21%), Positives = 68/165 (41%), Gaps = 33/165 (20%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETL------------AKHLFHWE 80
L+EA + ++ + L+G C + + L+ + MP L +++L +W
Sbjct: 57 LDEAYVMASVDHPHVVRLLGICL-SSQVQLITQLMPLGCLLDYVRNHKDNIGSQYLLNWC 115
Query: 81 TQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKN-SR 139
Q +A+ + Y K R ++ DL A +L + +++ FGL K
Sbjct: 116 VQ-------------IAKGMSYLEEK-RLVHRDLAARNVLVKTPQHVKITDFGLAKLLDV 161
Query: 140 DGKSYSTNLAFTP-----PEYMRTGRVTPESVVYSFGTMLLDLLS 179
D K Y P E + T +S V+S+G + +L++
Sbjct: 162 DEKEYHAEGGKVPIKWMALESILHRIYTHKSDVWSYGVTVWELMT 206
|
Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, resulting in the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Collectively, they can recognize a variety of ligands including EGF, TGFalpha, and neuregulins, among others. All four subfamily members can form homo- or heterodimers. HER3 contains an impaired kinase domain and depends on its heterodimerization partner for activation. EGFR subfamily members are involved in signaling pathways leading to a broad range of cellular responses including cell proliferation, differentiation, migration, growth inhibition, and apoptosis. Gain of function alterations, through their overexpression, deletions, or point mutations in their kinase domains, have been implicated in various cancers. These receptors are targets of many small molecule inhibitors and monoclonal antibodies used in cancer therapy. Length = 279 |
| >gnl|CDD|133193 cd05062, PTKc_IGF-1R, Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor | Back alignment and domain information |
|---|
Score = 38.5 bits (89), Expect = 0.004
Identities = 49/240 (20%), Positives = 99/240 (41%), Gaps = 24/240 (10%)
Query: 20 SVLESSDLGETLN-LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHL-- 76
+V E++ + E + L EA + + L+G + L++ E M L +L
Sbjct: 43 TVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRS 102
Query: 77 FHWETQ------PMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLS 130
E + P +++A +A + Y ++ + ++ DL A + +D ++
Sbjct: 103 LRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNAN-KFVHRDLAARNCMVAEDFTVKIG 161
Query: 131 SFGLMKN------SRDGKSYSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIP 184
FG+ ++ R G + + PE ++ G T S V+SFG +L ++ + P
Sbjct: 162 DFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQP 221
Query: 185 PSHALDLIRSKNFLLLMDSALEGHFSN--DEGTELVRLASRCLQSEARERPNAKSLVISL 242
+ + +M+ L N D EL+R+ C Q + RP+ ++ S+
Sbjct: 222 YQ---GMSNEQVLRFVMEGGLLDKPDNCPDMLFELMRM---CWQYNPKMRPSFLEIISSI 275
|
Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, where it is frequently overexpressed, IGF-1R is implicated in proliferation, the suppression of apoptosis, invasion, and metastasis. IGF-1R is being developed as a therapeutic target in cancer treatment. Length = 277 |
| >gnl|CDD|173648 cd05092, PTKc_TrkA, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A | Back alignment and domain information |
|---|
Score = 38.4 bits (89), Expect = 0.004
Identities = 41/169 (24%), Positives = 71/169 (42%), Gaps = 30/169 (17%)
Query: 35 EAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETL----------AKHLFHWETQP- 83
EA+ + L+ + + G C E L+V E+M + L AK L E
Sbjct: 57 EAELLTVLQHQHIVRFYGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAP 116
Query: 84 --MKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG 141
+ L +A +A + Y +S ++ DL L + ++ FG+ SRD
Sbjct: 117 GQLTLGQMLAIASQIASGMVYLASL-HFVHRDLATRNCLVGQGLVVKIGDFGM---SRD- 171
Query: 142 KSYSTN-----------LAFTPPEYMRTGRVTPESVVYSFGTMLLDLLS 179
YST+ + + PPE + + T ES ++SFG +L ++ +
Sbjct: 172 -IYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDIWSFGVVLWEIFT 219
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory and sympathetic neurons of the peripheral nervous system, and in basal forebrain cholinergic neurons of the central nervous system. It is critical for neuronal growth, differentiation and survival. Alternative TrkA splicing has been implicated as a pivotal regulator of neuroblastoma (NB) behavior. Normal TrkA expression is associated with better NB prognosis, while the hypoxia-regulated TrkAIII splice variant promotes NB pathogenesis and progression. Aberrant TrkA expression has also been demonstrated in non-neural tumors including prostate, breast, lung, and pancreatic cancers. Length = 280 |
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 424 | |||
| KOG0192 | 362 | consensus Tyrosine kinase specific for activated ( | 100.0 | |
| KOG0581 | 364 | consensus Mitogen-activated protein kinase kinase | 100.0 | |
| KOG0197 | 468 | consensus Tyrosine kinases [Signal transduction me | 100.0 | |
| KOG0591 | 375 | consensus NIMA (never in mitosis)-related G2-speci | 100.0 | |
| KOG0595 | 429 | consensus Serine/threonine-protein kinase involved | 100.0 | |
| KOG0575 | 592 | consensus Polo-like serine/threonine protein kinas | 100.0 | |
| KOG1187 | 361 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| KOG0615 | 475 | consensus Serine/threonine protein kinase Chk2 and | 100.0 | |
| KOG0578 | 550 | consensus p21-activated serine/threonine protein k | 100.0 | |
| KOG0198 | 313 | consensus MEKK and related serine/threonine protei | 100.0 | |
| KOG0598 | 357 | consensus Ribosomal protein S6 kinase and related | 100.0 | |
| KOG0593 | 396 | consensus Predicted protein kinase KKIAMRE [Genera | 100.0 | |
| PHA02988 | 283 | hypothetical protein; Provisional | 100.0 | |
| KOG1026 | 774 | consensus Nerve growth factor receptor TRKA and re | 100.0 | |
| KOG4721 | 904 | consensus Serine/threonine protein kinase, contain | 100.0 | |
| KOG0592 | 604 | consensus 3-phosphoinositide-dependent protein kin | 100.0 | |
| cd05102 | 338 | PTKc_VEGFR3 Catalytic domain of the Protein Tyrosi | 100.0 | |
| KOG0661 | 538 | consensus MAPK related serine/threonine protein ki | 100.0 | |
| KOG0582 | 516 | consensus Ste20-like serine/threonine protein kina | 100.0 | |
| KOG0583 | 370 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| KOG0194 | 474 | consensus Protein tyrosine kinase [Signal transduc | 100.0 | |
| KOG0201 | 467 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| KOG0193 | 678 | consensus Serine/threonine protein kinase RAF [Sig | 100.0 | |
| KOG0196 | 996 | consensus Tyrosine kinase, EPH (ephrin) receptor f | 100.0 | |
| KOG0597 | 808 | consensus Serine-threonine protein kinase FUSED [G | 100.0 | |
| KOG4278 | 1157 | consensus Protein tyrosine kinase [Signal transduc | 100.0 | |
| PRK13184 | 932 | pknD serine/threonine-protein kinase; Reviewed | 100.0 | |
| KOG0616 | 355 | consensus cAMP-dependent protein kinase catalytic | 100.0 | |
| cd05052 | 263 | PTKc_Abl Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd06649 | 331 | PKc_MEK2 Catalytic domain of the dual-specificity | 100.0 | |
| cd05631 | 285 | STKc_GRK4 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05571 | 323 | STKc_PKB Catalytic domain of the Protein Serine/Th | 100.0 | |
| PF07714 | 259 | Pkinase_Tyr: Protein tyrosine kinase Protein kinas | 100.0 | |
| KOG1095 | 1025 | consensus Protein tyrosine kinase [Signal transduc | 100.0 | |
| cd05106 | 374 | PTKc_CSF-1R Catalytic domain of the Protein Tyrosi | 100.0 | |
| cd05064 | 266 | PTKc_EphR_A10 Catalytic domain of the Protein Tyro | 100.0 | |
| cd05104 | 375 | PTKc_Kit Catalytic domain of the Protein Tyrosine | 100.0 | |
| KOG0659 | 318 | consensus Cdk activating kinase (CAK)/RNA polymera | 100.0 | |
| KOG0605 | 550 | consensus NDR and related serine/threonine kinases | 100.0 | |
| cd05048 | 283 | PTKc_Ror Catalytic Domain of the Protein Tyrosine | 100.0 | |
| cd05585 | 312 | STKc_YPK1_like Catalytic domain of Yeast Protein K | 100.0 | |
| KOG0589 | 426 | consensus Serine/threonine protein kinase [General | 100.0 | |
| cd05096 | 304 | PTKc_DDR1 Catalytic domain of the Protein Tyrosine | 100.0 | |
| PTZ00263 | 329 | protein kinase A catalytic subunit; Provisional | 100.0 | |
| KOG0600 | 560 | consensus Cdc2-related protein kinase [Cell cycle | 100.0 | |
| cd05593 | 328 | STKc_PKB_gamma Catalytic domain of the Protein Ser | 100.0 | |
| cd05072 | 261 | PTKc_Lyn Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05612 | 291 | STKc_PRKX_like Catalytic domain of PRKX-like Prote | 100.0 | |
| cd05595 | 323 | STKc_PKB_beta Catalytic domain of the Protein Seri | 100.0 | |
| KOG0577 | 948 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| cd05114 | 256 | PTKc_Tec_Rlk Catalytic domain of the Protein Tyros | 100.0 | |
| KOG0588 | 786 | consensus Serine/threonine protein kinase [Cell cy | 100.0 | |
| PTZ00267 | 478 | NIMA-related protein kinase; Provisional | 100.0 | |
| PTZ00426 | 340 | cAMP-dependent protein kinase catalytic subunit; P | 100.0 | |
| cd05108 | 316 | PTKc_EGFR Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05116 | 257 | PTKc_Syk Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05608 | 280 | STKc_GRK1 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05068 | 261 | PTKc_Frk_like Catalytic domain of Fyn-related kina | 100.0 | |
| KOG0585 | 576 | consensus Ca2+/calmodulin-dependent protein kinase | 100.0 | |
| cd05600 | 333 | STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- | 100.0 | |
| cd05084 | 252 | PTKc_Fes Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd06650 | 333 | PKc_MEK1 Catalytic domain of the dual-specificity | 100.0 | |
| KOG0580 | 281 | consensus Serine/threonine protein kinase [Cell cy | 100.0 | |
| cd05113 | 256 | PTKc_Btk_Bmx Catalytic domain of the Protein Tyros | 100.0 | |
| cd05594 | 325 | STKc_PKB_alpha Catalytic domain of the Protein Ser | 100.0 | |
| cd05115 | 257 | PTKc_Zap-70 Catalytic domain of the Protein Tyrosi | 100.0 | |
| cd05105 | 400 | PTKc_PDGFR_alpha Catalytic domain of the Protein T | 100.0 | |
| cd05148 | 261 | PTKc_Srm_Brk Catalytic domain of the Protein Tyros | 100.0 | |
| cd05607 | 277 | STKc_GRK7 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05033 | 266 | PTKc_EphR Catalytic domain of Ephrin Receptor Prot | 100.0 | |
| cd05039 | 256 | PTKc_Csk_like Catalytic domain of C-terminal Src k | 100.0 | |
| KOG1989 | 738 | consensus ARK protein kinase family [Signal transd | 100.0 | |
| KOG4257 | 974 | consensus Focal adhesion tyrosine kinase FAK, cont | 100.0 | |
| cd05584 | 323 | STKc_p70S6K Catalytic domain of the Protein Serine | 100.0 | |
| cd05082 | 256 | PTKc_Csk Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05094 | 291 | PTKc_TrkC Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05588 | 329 | STKc_aPKC Catalytic domain of the Protein Serine/T | 100.0 | |
| PLN00034 | 353 | mitogen-activated protein kinase kinase; Provision | 100.0 | |
| cd05049 | 280 | PTKc_Trk Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05070 | 260 | PTKc_Fyn_Yrk Catalytic domain of the Protein Tyros | 100.0 | |
| cd05071 | 262 | PTKc_Src Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05059 | 256 | PTKc_Tec_like Catalytic domain of Tec-like Protein | 100.0 | |
| cd05090 | 283 | PTKc_Ror1 Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05054 | 337 | PTKc_VEGFR Catalytic domain of the Protein Tyrosin | 100.0 | |
| KOG0599 | 411 | consensus Phosphorylase kinase gamma subunit [Carb | 100.0 | |
| cd05620 | 316 | STKc_nPKC_delta Catalytic domain of the Protein Se | 100.0 | |
| cd05573 | 350 | STKc_ROCK_NDR_like Catalytic domain of ROCK- and N | 100.0 | |
| cd05062 | 277 | PTKc_IGF-1R Catalytic domain of the Protein Tyrosi | 100.0 | |
| cd05076 | 274 | PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of th | 100.0 | |
| cd05618 | 329 | STKc_aPKC_iota Catalytic domain of the Protein Ser | 100.0 | |
| cd05605 | 285 | STKc_GRK4_like Catalytic domain of G protein-coupl | 100.0 | |
| cd05591 | 321 | STKc_nPKC_epsilon Catalytic domain of the Protein | 100.0 | |
| cd05053 | 293 | PTKc_FGFR Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05592 | 316 | STKc_nPKC_theta_delta Catalytic domain of the Prot | 100.0 | |
| cd05582 | 318 | STKc_RSK_N N-terminal catalytic domain of the Prot | 100.0 | |
| cd05599 | 364 | STKc_NDR_like Catalytic domain of Nuclear Dbf2-Rel | 100.0 | |
| cd05590 | 320 | STKc_nPKC_eta Catalytic domain of the Protein Seri | 100.0 | |
| cd05626 | 381 | STKc_LATS2 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd05067 | 260 | PTKc_Lck_Blk Catalytic domain of the Protein Tyros | 100.0 | |
| cd07848 | 287 | STKc_CDKL5 Catalytic domain of the Serine/Threonin | 100.0 | |
| cd05589 | 324 | STKc_PKN Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd05077 | 262 | PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of th | 100.0 | |
| cd05080 | 283 | PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the | 100.0 | |
| cd05055 | 302 | PTKc_PDGFR Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd05078 | 258 | PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain | 100.0 | |
| cd05093 | 288 | PTKc_TrkB Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05091 | 283 | PTKc_Ror2 Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05088 | 303 | PTKc_Tie2 Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05111 | 279 | PTK_HER3 Pseudokinase domain of the Protein Tyrosi | 100.0 | |
| cd07871 | 288 | STKc_PCTAIRE3 Catalytic domain of the Serine/Threo | 100.0 | |
| cd05069 | 260 | PTKc_Yes Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd00192 | 262 | PTKc Catalytic domain of Protein Tyrosine Kinases. | 100.0 | |
| cd05045 | 290 | PTKc_RET Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05075 | 272 | PTKc_Axl Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05619 | 316 | STKc_nPKC_theta Catalytic domain of the Protein Se | 100.0 | |
| cd05036 | 277 | PTKc_ALK_LTK Catalytic domain of the Protein Tyros | 100.0 | |
| KOG0660 | 359 | consensus Mitogen-activated protein kinase [Signal | 100.0 | |
| cd05570 | 318 | STKc_PKC Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd05060 | 257 | PTKc_Syk_like Catalytic domain of Spleen Tyrosine | 100.0 | |
| cd05089 | 297 | PTKc_Tie1 Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05047 | 270 | PTKc_Tie Catalytic domain of Tie Protein Tyrosine | 100.0 | |
| KOG0611 | 668 | consensus Predicted serine/threonine protein kinas | 100.0 | |
| cd05098 | 307 | PTKc_FGFR1 Catalytic domain of the Protein Tyrosin | 100.0 | |
| KOG0033 | 355 | consensus Ca2+/calmodulin-dependent protein kinase | 100.0 | |
| cd05596 | 370 | STKc_ROCK Catalytic domain of the Protein Serine/T | 100.0 | |
| cd07869 | 303 | STKc_PFTAIRE1 Catalytic domain of the Serine/Threo | 100.0 | |
| cd05628 | 363 | STKc_NDR1 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05629 | 377 | STKc_NDR_like_fungal Catalytic domain of Fungal Nu | 100.0 | |
| KOG4279 | 1226 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| cd08529 | 256 | STKc_FA2-like Catalytic domain of the Protein Seri | 100.0 | |
| cd05107 | 401 | PTKc_PDGFR_beta Catalytic domain of the Protein Ty | 100.0 | |
| cd05575 | 323 | STKc_SGK Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd05092 | 280 | PTKc_TrkA Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05101 | 304 | PTKc_FGFR2 Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd05625 | 382 | STKc_LATS1 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd05614 | 332 | STKc_MSK2_N N-terminal catalytic domain of the Pro | 100.0 | |
| cd05040 | 257 | PTKc_Ack_like Catalytic domain of the Protein Tyro | 100.0 | |
| cd05058 | 262 | PTKc_Met_Ron Catalytic domain of the Protein Tyros | 100.0 | |
| cd05109 | 279 | PTKc_HER2 Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05035 | 273 | PTKc_Axl_like Catalytic Domain of Axl-like Protein | 100.0 | |
| cd05065 | 269 | PTKc_EphR_B Catalytic domain of the Protein Tyrosi | 100.0 | |
| KOG0694 | 694 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| cd08228 | 267 | STKc_Nek6 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05598 | 376 | STKc_LATS Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05083 | 254 | PTKc_Chk Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05037 | 259 | PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the | 100.0 | |
| PHA03212 | 391 | serine/threonine kinase US3; Provisional | 100.0 | |
| cd05032 | 277 | PTKc_InsR_like Catalytic domain of Insulin Recepto | 100.0 | |
| KOG0663 | 419 | consensus Protein kinase PITSLRE and related kinas | 100.0 | |
| cd07862 | 290 | STKc_CDK6 Catalytic domain of the Serine/Threonine | 100.0 | |
| KOG0658 | 364 | consensus Glycogen synthase kinase-3 [Carbohydrate | 100.0 | |
| cd05099 | 314 | PTKc_FGFR4 Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd05034 | 261 | PTKc_Src_like Catalytic domain of Src kinase-like | 100.0 | |
| cd05601 | 330 | STKc_CRIK Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05602 | 325 | STKc_SGK1 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05617 | 327 | STKc_aPKC_zeta Catalytic domain of the Protein Ser | 100.0 | |
| cd05085 | 250 | PTKc_Fer Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05621 | 370 | STKc_ROCK2 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd07859 | 338 | STKc_TDY_MAPK_plant Catalytic domain of the Serine | 100.0 | |
| cd05044 | 269 | PTKc_c-ros Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd05587 | 324 | STKc_cPKC Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05630 | 285 | STKc_GRK6 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06637 | 272 | STKc_TNIK Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05073 | 260 | PTKc_Hck Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05063 | 268 | PTKc_EphR_A2 Catalytic domain of the Protein Tyros | 100.0 | |
| cd05087 | 269 | PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein | 100.0 | |
| cd08229 | 267 | STKc_Nek7 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05100 | 334 | PTKc_FGFR3 Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd05632 | 285 | STKc_GRK5 Catalytic domain of the Protein Serine/T | 100.0 | |
| PTZ00283 | 496 | serine/threonine protein kinase; Provisional | 100.0 | |
| cd05112 | 256 | PTKc_Itk Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05616 | 323 | STKc_cPKC_beta Catalytic domain of the Protein Ser | 100.0 | |
| cd05603 | 321 | STKc_SGK2 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05066 | 267 | PTKc_EphR_A Catalytic domain of the Protein Tyrosi | 100.0 | |
| cd05041 | 251 | PTKc_Fes_like Catalytic domain of Fes-like Protein | 100.0 | |
| cd06625 | 263 | STKc_MEKK3_like Catalytic domain of MAP/ERK kinase | 100.0 | |
| cd08219 | 255 | STKc_Nek3 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05604 | 325 | STKc_SGK3 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05056 | 270 | PTKc_FAK Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05043 | 280 | PTK_Ryk Pseudokinase domain of Ryk (Receptor relat | 100.0 | |
| cd05081 | 284 | PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of | 100.0 | |
| cd05051 | 296 | PTKc_DDR Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05079 | 284 | PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the | 100.0 | |
| cd05038 | 284 | PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the P | 100.0 | |
| cd05622 | 371 | STKc_ROCK1 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd05627 | 360 | STKc_NDR2 Catalytic domain of the Protein Serine/T | 100.0 | |
| KOG0610 | 459 | consensus Putative serine/threonine protein kinase | 100.0 | |
| cd06654 | 296 | STKc_PAK1 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05050 | 288 | PTKc_Musk Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05061 | 288 | PTKc_InsR Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05042 | 269 | PTKc_Aatyk Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd05086 | 268 | PTKc_Aatyk2 Catalytic domain of the Protein Tyrosi | 100.0 | |
| cd05586 | 330 | STKc_Sck1_like Catalytic domain of Suppressor of l | 100.0 | |
| cd06643 | 282 | STKc_SLK Catalytic domain of the Protein Serine/Th | 100.0 | |
| KOG0594 | 323 | consensus Protein kinase PCTAIRE and related kinas | 100.0 | |
| cd06646 | 267 | STKc_MAP4K5 Catalytic domain of the Protein Serine | 100.0 | |
| KOG0574 | 502 | consensus STE20-like serine/threonine kinase MST [ | 100.0 | |
| cd05097 | 295 | PTKc_DDR_like Catalytic domain of Discoidin Domain | 100.0 | |
| cd05615 | 323 | STKc_cPKC_alpha Catalytic domain of the Protein Se | 100.0 | |
| KOG0584 | 632 | consensus Serine/threonine protein kinase [General | 100.0 | |
| cd08224 | 267 | STKc_Nek6_Nek7 Catalytic domain of the Protein Ser | 100.0 | |
| KOG0579 | 1187 | consensus Ste20-like serine/threonine protein kina | 100.0 | |
| cd06628 | 267 | STKc_MAPKKK_Byr2_like Catalytic domain of fungal B | 100.0 | |
| cd05110 | 303 | PTKc_HER4 Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05103 | 343 | PTKc_VEGFR2 Catalytic domain of the Protein Tyrosi | 100.0 | |
| cd05095 | 296 | PTKc_DDR2 Catalytic domain of the Protein Tyrosine | 100.0 | |
| KOG0032 | 382 | consensus Ca2+/calmodulin-dependent protein kinase | 100.0 | |
| cd05057 | 279 | PTKc_EGFR_like Catalytic domain of Epidermal Growt | 100.0 | |
| cd06615 | 308 | PKc_MEK Catalytic domain of the dual-specificity P | 100.0 | |
| cd06642 | 277 | STKc_STK25-YSK1 Catalytic domain of the Protein Se | 100.0 | |
| PTZ00036 | 440 | glycogen synthase kinase; Provisional | 100.0 | |
| cd06619 | 279 | PKc_MKK5 Catalytic domain of the dual-specificity | 100.0 | |
| KOG0199 | 1039 | consensus ACK and related non-receptor tyrosine ki | 100.0 | |
| cd06640 | 277 | STKc_MST4 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06636 | 282 | STKc_MAP4K4_6 Catalytic domain of the Protein Seri | 100.0 | |
| cd07876 | 359 | STKc_JNK2 Catalytic domain of the Serine/Threonine | 100.0 | |
| smart00219 | 258 | TyrKc Tyrosine kinase, catalytic domain. Phosphotr | 100.0 | |
| cd08227 | 327 | PK_STRAD_alpha Pseudokinase domain of STE20-relate | 100.0 | |
| PHA03211 | 461 | serine/threonine kinase US3; Provisional | 100.0 | |
| cd06655 | 296 | STKc_PAK2 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06612 | 256 | STKc_MST1_2 Catalytic domain of the Protein Serine | 100.0 | |
| cd07874 | 355 | STKc_JNK3 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd07863 | 288 | STKc_CDK4 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd08223 | 257 | STKc_Nek4 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd08221 | 256 | STKc_Nek9 Catalytic domain of the Protein Serine/T | 100.0 | |
| KOG0667 | 586 | consensus Dual-specificity tyrosine-phosphorylatio | 100.0 | |
| cd05597 | 331 | STKc_DMPK_like Catalytic domain of Myotonic Dystro | 100.0 | |
| cd06645 | 267 | STKc_MAP4K3 Catalytic domain of the Protein Serine | 100.0 | |
| KOG2345 | 302 | consensus Serine/threonine protein kinase/TGF-beta | 100.0 | |
| cd07872 | 309 | STKc_PCTAIRE2 Catalytic domain of the Serine/Threo | 100.0 | |
| cd05046 | 275 | PTK_CCK4 Pseudokinase domain of the Protein Tyrosi | 100.0 | |
| cd06609 | 274 | STKc_MST3_like Catalytic domain of Mammalian Ste20 | 100.0 | |
| cd07853 | 372 | STKc_NLK Catalytic domain of the Serine/Threonine | 100.0 | |
| KOG4717 | 864 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| cd06624 | 268 | STKc_ASK Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd07875 | 364 | STKc_JNK1 Catalytic domain of the Serine/Threonine | 100.0 | |
| KOG1094 | 807 | consensus Discoidin domain receptor DDR1 [Signal t | 100.0 | |
| cd05574 | 316 | STKc_phototropin_like Catalytic domain of Phototro | 100.0 | |
| PHA03207 | 392 | serine/threonine kinase US3; Provisional | 100.0 | |
| cd06644 | 292 | STKc_STK10_LOK Catalytic domain of the Protein Ser | 100.0 | |
| cd06613 | 262 | STKc_MAP4K3_like Catalytic domain of Mitogen-activ | 100.0 | |
| cd06631 | 265 | STKc_YSK4 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06622 | 286 | PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS | 100.0 | |
| cd06611 | 280 | STKc_SLK_like Catalytic domain of Ste20-like kinas | 100.0 | |
| PTZ00266 | 1021 | NIMA-related protein kinase; Provisional | 100.0 | |
| cd05624 | 331 | STKc_MRCK_beta Catalytic domain of the Protein Ser | 100.0 | |
| cd08220 | 256 | STKc_Nek8 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05623 | 332 | STKc_MRCK_alpha Catalytic domain of the Protein Se | 100.0 | |
| cd06620 | 284 | PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr | 100.0 | |
| cd05577 | 277 | STKc_GRK Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd05572 | 262 | STKc_cGK_PKG Catalytic domain of the Protein Serin | 100.0 | |
| cd06607 | 307 | STKc_TAO Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd06656 | 297 | STKc_PAK3 Catalytic domain of the Protein Serine/T | 100.0 | |
| PF00069 | 260 | Pkinase: Protein kinase domain Protein kinase; unc | 100.0 | |
| cd08218 | 256 | STKc_Nek1 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06635 | 317 | STKc_TAO1 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06658 | 292 | STKc_PAK5 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05580 | 290 | STKc_PKA Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd06629 | 272 | STKc_MAPKKK_Bck1_like Catalytic domain of fungal B | 100.0 | |
| cd06651 | 266 | STKc_MEKK3 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd06652 | 265 | STKc_MEKK2 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd06610 | 267 | STKc_OSR1_SPAK Catalytic domain of the Protein Ser | 100.0 | |
| cd07861 | 285 | STKc_CDK1_euk Catalytic domain of the Serine/Threo | 100.0 | |
| cd06605 | 265 | PKc_MAPKK Catalytic domain of the dual-specificity | 100.0 | |
| cd06641 | 277 | STKc_MST3 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd07868 | 317 | STKc_CDK8 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd06638 | 286 | STKc_myosinIIIA Catalytic domain of the Protein Se | 100.0 | |
| PHA03209 | 357 | serine/threonine kinase US3; Provisional | 100.0 | |
| cd06608 | 275 | STKc_myosinIII_like Catalytic domain of Class III | 100.0 | |
| cd06632 | 258 | STKc_MEKK1_plant Catalytic domain of the Protein S | 100.0 | |
| cd06659 | 297 | STKc_PAK6 Catalytic domain of the Protein Serine/T | 100.0 | |
| KOG0596 | 677 | consensus Dual specificity; serine/threonine and t | 100.0 | |
| PTZ00284 | 467 | protein kinase; Provisional | 100.0 | |
| cd07878 | 343 | STKc_p38beta_MAPK11 Catalytic domain of the Serine | 100.0 | |
| cd06614 | 286 | STKc_PAK Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd05074 | 273 | PTKc_Tyro3 Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd08528 | 269 | STKc_Nek10 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd08217 | 265 | STKc_Nek2 Catalytic domain of the Protein Serine/T | 100.0 | |
| KOG4645 | 1509 | consensus MAPKKK (MAP kinase kinase kinase) SSK2 a | 100.0 | |
| cd05609 | 305 | STKc_MAST Catalytic domain of the Protein Serine/T | 100.0 | |
| cd07847 | 286 | STKc_CDKL1_4 Catalytic domain of the Serine/Threon | 100.0 | |
| cd07873 | 301 | STKc_PCTAIRE1 Catalytic domain of the Serine/Threo | 100.0 | |
| cd05633 | 279 | STKc_GRK3 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd07867 | 317 | STKc_CDC2L6 Catalytic domain of Serine/Threonine K | 100.0 | |
| cd08225 | 257 | STKc_Nek5 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05578 | 258 | STKc_Yank1 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd05611 | 260 | STKc_Rim15_like Catalytic domain of fungal Rim15-l | 100.0 | |
| cd07839 | 284 | STKc_CDK5 Catalytic domain of the Serine/Threonine | 100.0 | |
| PHA03390 | 267 | pk1 serine/threonine-protein kinase 1; Provisional | 100.0 | |
| KOG0983 | 391 | consensus Mitogen-activated protein kinase (MAPK) | 100.0 | |
| KOG0604 | 400 | consensus MAP kinase-activated protein kinase 2 [S | 100.0 | |
| KOG0986 | 591 | consensus G protein-coupled receptor kinase [Signa | 100.0 | |
| cd06630 | 268 | STKc_MEKK1 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd06648 | 285 | STKc_PAK_II Catalytic domain of the Protein Serine | 100.0 | |
| cd06616 | 288 | PKc_MKK4 Catalytic domain of the dual-specificity | 100.0 | |
| cd06639 | 291 | STKc_myosinIIIB Catalytic domain of the Protein Se | 100.0 | |
| cd06626 | 264 | STKc_MEKK4 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd06634 | 308 | STKc_TAO2 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd08226 | 328 | PK_STRAD_beta Pseudokinase domain of STE20-related | 100.0 | |
| cd07860 | 284 | STKc_CDK2_3 Catalytic domain of the Serine/Threoni | 100.0 | |
| cd06917 | 277 | STKc_NAK1_like Catalytic domain of Fungal Nak1-lik | 100.0 | |
| cd06623 | 264 | PKc_MAPKK_plant_like Catalytic domain of Plant dua | 100.0 | |
| cd06621 | 287 | PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek | 100.0 | |
| cd07832 | 286 | STKc_CCRK Catalytic domain of the Serine/Threonine | 100.0 | |
| cd08216 | 314 | PK_STRAD Pseudokinase domain of STE20-related kina | 100.0 | |
| cd05122 | 253 | PKc_STE Catalytic domain of STE family Protein Kin | 100.0 | |
| cd06647 | 293 | STKc_PAK_I Catalytic domain of the Protein Serine/ | 100.0 | |
| cd06633 | 313 | STKc_TAO3 Catalytic domain of the Protein Serine/T | 100.0 | |
| PHA03210 | 501 | serine/threonine kinase US3; Provisional | 100.0 | |
| cd07844 | 291 | STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like | 100.0 | |
| cd07841 | 298 | STKc_CDK7 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd06617 | 283 | PKc_MKK3_6 Catalytic domain of the dual-specificit | 100.0 | |
| cd06606 | 260 | STKc_MAPKKK Catalytic domain of the Protein Serine | 100.0 | |
| cd05579 | 265 | STKc_MAST_like Catalytic domain of Microtubule-ass | 100.0 | |
| cd06657 | 292 | STKc_PAK4 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd07833 | 288 | STKc_CDKL Catalytic domain of Cyclin-Dependent pro | 100.0 | |
| cd07846 | 286 | STKc_CDKL2_3 Catalytic domain of the Serine/Threon | 100.0 | |
| cd05606 | 278 | STKc_beta_ARK Catalytic domain of the Protein Seri | 100.0 | |
| cd06627 | 254 | STKc_Cdc7_like Catalytic domain of Cell division c | 100.0 | |
| cd08215 | 258 | STKc_Nek Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd07843 | 293 | STKc_CDC2L1 Catalytic domain of the Serine/Threoni | 100.0 | |
| cd06653 | 264 | STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kina | 100.0 | |
| cd05576 | 237 | STKc_RPK118_like Catalytic domain of the Protein S | 100.0 | |
| KOG0586 | 596 | consensus Serine/threonine protein kinase [General | 100.0 | |
| cd07870 | 291 | STKc_PFTAIRE2 Catalytic domain of the Serine/Threo | 100.0 | |
| cd07835 | 283 | STKc_CDK1_like Catalytic domain of Cyclin-Dependen | 100.0 | |
| cd08530 | 256 | STKc_CNK2-like Catalytic domain of the Protein Ser | 100.0 | |
| cd07837 | 295 | STKc_CdkB_plant Catalytic domain of the Serine/Thr | 100.0 | |
| PLN00009 | 294 | cyclin-dependent kinase A; Provisional | 100.0 | |
| cd07831 | 282 | STKc_MOK Catalytic domain of the Serine/Threonine | 100.0 | |
| PHA02882 | 294 | putative serine/threonine kinase; Provisional | 100.0 | |
| cd07850 | 353 | STKc_JNK Catalytic domain of the Serine/Threonine | 100.0 | |
| cd07836 | 284 | STKc_Pho85 Catalytic domain of the Serine/Threonin | 100.0 | |
| cd07840 | 287 | STKc_CDK9_like Catalytic domain of Cyclin-Dependen | 100.0 | |
| PLN00113 | 968 | leucine-rich repeat receptor-like protein kinase; | 100.0 | |
| cd07842 | 316 | STKc_CDK8_like Catalytic domain of Cyclin-Dependen | 100.0 | |
| cd05583 | 288 | STKc_MSK_N N-terminal catalytic domain of the Prot | 100.0 | |
| cd05123 | 250 | STKc_AGC Catalytic domain of AGC family Protein Se | 100.0 | |
| cd05613 | 290 | STKc_MSK1_N N-terminal catalytic domain of the Pro | 100.0 | |
| cd08222 | 260 | STKc_Nek11 Catalytic domain of the Protein Serine/ | 100.0 | |
| KOG4250 | 732 | consensus TANK binding protein kinase TBK1 [Signal | 100.0 | |
| cd05118 | 283 | STKc_CMGC Catalytic domain of CMGC family Serine/T | 100.0 | |
| cd05581 | 280 | STKc_PDK1 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd07849 | 336 | STKc_ERK1_2_like Catalytic domain of Extracellular | 100.0 | |
| cd06618 | 296 | PKc_MKK7 Catalytic domain of the dual-specificity | 100.0 | |
| cd07852 | 337 | STKc_MAPK15 Catalytic domain of the Serine/Threoni | 100.0 | |
| cd07865 | 310 | STKc_CDK9 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd07858 | 337 | STKc_TEY_MAPK_plant Catalytic domain of the Serine | 100.0 | |
| cd07830 | 283 | STKc_MAK_like Catalytic domain of Male germ cell-A | 100.0 | |
| cd07838 | 287 | STKc_CDK4_6_like Catalytic domain of Cyclin-Depend | 100.0 | |
| PTZ00024 | 335 | cyclin-dependent protein kinase; Provisional | 100.0 | |
| cd07855 | 334 | STKc_ERK5 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd07834 | 330 | STKc_MAPK Catalytic domain of the Serine/Threonine | 100.0 | |
| cd07845 | 309 | STKc_CDK10 Catalytic domain of the Serine/Threonin | 100.0 | |
| KOG0603 | 612 | consensus Ribosomal protein S6 kinase [Signal tran | 100.0 | |
| KOG0200 | 609 | consensus Fibroblast/platelet-derived growth facto | 100.0 | |
| KOG3653 | 534 | consensus Transforming growth factor beta/activin | 100.0 | |
| cd07879 | 342 | STKc_p38delta_MAPK13 Catalytic domain of the Serin | 100.0 | |
| KOG0587 | 953 | consensus Traf2- and Nck-interacting kinase and re | 100.0 | |
| cd07864 | 302 | STKc_CDK12 Catalytic domain of the Serine/Threonin | 100.0 | |
| cd07856 | 328 | STKc_Sty1_Hog1 Catalytic domain of the Serine/Thre | 100.0 | |
| KOG1006 | 361 | consensus Mitogen-activated protein kinase (MAPK) | 100.0 | |
| cd07880 | 343 | STKc_p38gamma_MAPK12 Catalytic domain of the Serin | 100.0 | |
| cd07829 | 282 | STKc_CDK_like Catalytic domain of Cyclin-Dependent | 100.0 | |
| cd07877 | 345 | STKc_p38alpha_MAPK14 Catalytic domain of the Serin | 100.0 | |
| cd07857 | 332 | STKc_MPK1 Catalytic domain of the Serine/Threonine | 100.0 | |
| KOG0607 | 463 | consensus MAP kinase-interacting kinase and relate | 100.0 | |
| KOG1025 | 1177 | consensus Epidermal growth factor receptor EGFR an | 100.0 | |
| cd07851 | 343 | STKc_p38 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd07854 | 342 | STKc_MAPK4_6 Catalytic domain of the Serine/Threon | 100.0 | |
| cd07866 | 311 | STKc_BUR1 Catalytic domain of the Serine/Threonine | 100.0 | |
| KOG0612 | 1317 | consensus Rho-associated, coiled-coil containing p | 100.0 | |
| KOG1035 | 1351 | consensus eIF-2alpha kinase GCN2 [Translation, rib | 100.0 | |
| smart00220 | 244 | S_TKc Serine/Threonine protein kinases, catalytic | 100.0 | |
| KOG0690 | 516 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| cd05610 | 669 | STKc_MASTL Catalytic domain of the Protein Serine/ | 100.0 | |
| KOG0671 | 415 | consensus LAMMER dual specificity kinases [Signal | 100.0 | |
| KOG0614 | 732 | consensus cGMP-dependent protein kinase [Signal tr | 100.0 | |
| KOG0666 | 438 | consensus Cyclin C-dependent kinase CDK8 [Transcri | 100.0 | |
| KOG1151 | 775 | consensus Tousled-like protein kinase [Signal tran | 100.0 | |
| KOG4236 | 888 | consensus Serine/threonine protein kinase PKC mu/P | 100.0 | |
| KOG2052 | 513 | consensus Activin A type IB receptor, serine/threo | 100.0 | |
| KOG0669 | 376 | consensus Cyclin T-dependent kinase CDK9 [Cell cyc | 100.0 | |
| KOG0608 | 1034 | consensus Warts/lats-like serine threonine kinases | 100.0 | |
| KOG0696 | 683 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| KOG1024 | 563 | consensus Receptor-like protein tyrosine kinase RY | 100.0 | |
| KOG0662 | 292 | consensus Cyclin-dependent kinase CDK5 [Intracellu | 99.98 | |
| KOG1027 | 903 | consensus Serine/threonine protein kinase and endo | 99.98 | |
| PLN03225 | 566 | Serine/threonine-protein kinase SNT7; Provisional | 99.97 | |
| KOG0665 | 369 | consensus Jun-N-terminal kinase (JNK) [Signal tran | 99.97 | |
| KOG0984 | 282 | consensus Mitogen-activated protein kinase (MAPK) | 99.97 | |
| PLN03224 | 507 | probable serine/threonine protein kinase; Provisio | 99.97 | |
| KOG0664 | 449 | consensus Nemo-like MAPK-related serine/threonine | 99.97 | |
| cd00180 | 215 | PKc Catalytic domain of Protein Kinases. Protein K | 99.97 | |
| KOG0670 | 752 | consensus U4/U6-associated splicing factor PRP4 [R | 99.96 | |
| KOG0576 | 829 | consensus Mitogen-activated protein kinase kinase | 99.96 | |
| PLN00181 | 793 | protein SPA1-RELATED; Provisional | 99.96 | |
| KOG0668 | 338 | consensus Casein kinase II, alpha subunit [Signal | 99.96 | |
| smart00750 | 176 | KIND kinase non-catalytic C-lobe domain. It is an | 99.96 | |
| KOG0695 | 593 | consensus Serine/threonine protein kinase [Signal | 99.96 | |
| KOG0195 | 448 | consensus Integrin-linked kinase [Signal transduct | 99.95 | |
| KOG1290 | 590 | consensus Serine/threonine protein kinase [Signal | 99.95 | |
| KOG1152 | 772 | consensus Signal transduction serine/threonine kin | 99.95 | |
| smart00221 | 225 | STYKc Protein kinase; unclassified specificity. Ph | 99.95 | |
| KOG1345 | 378 | consensus Serine/threonine kinase [Signal transduc | 99.95 | |
| KOG1167 | 418 | consensus Serine/threonine protein kinase of the C | 99.92 | |
| KOG1164 | 322 | consensus Casein kinase (serine/threonine/tyrosine | 99.91 | |
| PRK09188 | 365 | serine/threonine protein kinase; Provisional | 99.88 | |
| KOG1023 | 484 | consensus Natriuretic peptide receptor, guanylate | 99.88 | |
| COG0515 | 384 | SPS1 Serine/threonine protein kinase [General func | 99.88 | |
| KOG0590 | 601 | consensus Checkpoint kinase and related serine/thr | 99.88 | |
| KOG1165 | 449 | consensus Casein kinase (serine/threonine/tyrosine | 99.87 | |
| KOG1163 | 341 | consensus Casein kinase (serine/threonine/tyrosine | 99.86 | |
| KOG4158 | 598 | consensus BRPK/PTEN-induced protein kinase [Signal | 99.86 | |
| PRK12274 | 218 | serine/threonine protein kinase; Provisional | 99.85 | |
| KOG0553 | 304 | consensus TPR repeat-containing protein [General f | 99.85 | |
| PRK10359 | 232 | lipopolysaccharide core biosynthesis protein; Prov | 99.84 | |
| KOG0603 | 612 | consensus Ribosomal protein S6 kinase [Signal tran | 99.84 | |
| cd05147 | 190 | RIO1_euk RIO kinase family; eukaryotic RIO1, catal | 99.83 | |
| cd05145 | 190 | RIO1_like RIO kinase family; RIO1, RIO3 and simila | 99.81 | |
| KOG1033 | 516 | consensus eIF-2alpha kinase PEK/EIF2AK3 [Translati | 99.81 | |
| PF14531 | 288 | Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_ | 99.8 | |
| PRK10345 | 210 | hypothetical protein; Provisional | 99.78 | |
| KOG1240 | 1431 | consensus Protein kinase containing WD40 repeats [ | 99.77 | |
| PRK14879 | 211 | serine/threonine protein kinase; Provisional | 99.73 | |
| TIGR03724 | 199 | arch_bud32 Kae1-associated kinase Bud32. Members o | 99.72 | |
| PRK09605 | 535 | bifunctional UGMP family protein/serine/threonine | 99.71 | |
| KOG0606 | 1205 | consensus Microtubule-associated serine/threonine | 99.71 | |
| smart00090 | 237 | RIO RIO-like kinase. | 99.69 | |
| PRK01723 | 239 | 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed | 99.68 | |
| KOG1166 | 974 | consensus Mitotic checkpoint serine/threonine prot | 99.68 | |
| KOG0548 | 539 | consensus Molecular co-chaperone STI1 [Posttransla | 99.66 | |
| cd05144 | 198 | RIO2_C RIO kinase family; RIO2, C-terminal catalyt | 99.66 | |
| KOG4234 | 271 | consensus TPR repeat-containing protein [General f | 99.65 | |
| KOG0548 | 539 | consensus Molecular co-chaperone STI1 [Posttransla | 99.64 | |
| PRK15359 | 144 | type III secretion system chaperone protein SscB; | 99.64 | |
| cd05120 | 155 | APH_ChoK_like Aminoglycoside 3'-phosphotransferase | 99.63 | |
| KOG0543 | 397 | consensus FKBP-type peptidyl-prolyl cis-trans isom | 99.61 | |
| KOG0590 | 601 | consensus Checkpoint kinase and related serine/thr | 99.61 | |
| KOG4648 | 536 | consensus Uncharacterized conserved protein, conta | 99.6 | |
| PRK15363 | 157 | pathogenicity island 2 chaperone protein SscA; Pro | 99.6 | |
| PLN03088 | 356 | SGT1, suppressor of G2 allele of SKP1; Provisional | 99.6 | |
| KOG1266 | 458 | consensus Protein kinase [Signal transduction mech | 99.57 | |
| KOG0547 | 606 | consensus Translocase of outer mitochondrial membr | 99.54 | |
| KOG1125 | 579 | consensus TPR repeat-containing protein [General f | 99.52 | |
| cd05119 | 187 | RIO RIO kinase family, catalytic domain. The RIO k | 99.51 | |
| PRK11189 | 296 | lipoprotein NlpI; Provisional | 99.5 | |
| TIGR02552 | 135 | LcrH_SycD type III secretion low calcium response | 99.49 | |
| KOG0601 | 524 | consensus Cyclin-dependent kinase WEE1 [Cell cycle | 99.47 | |
| PRK10370 | 198 | formate-dependent nitrite reductase complex subuni | 99.46 | |
| KOG4626 | 966 | consensus O-linked N-acetylglucosamine transferase | 99.42 | |
| PF13414 | 69 | TPR_11: TPR repeat; PDB: 2HO1_B 2FI7_B 2DBA_A 3Q4A | 99.42 | |
| KOG4642 | 284 | consensus Chaperone-dependent E3 ubiquitin protein | 99.41 | |
| KOG0550 | 486 | consensus Molecular chaperone (DnaJ superfamily) [ | 99.38 | |
| KOG4626 | 966 | consensus O-linked N-acetylglucosamine transferase | 99.37 | |
| KOG0624 | 504 | consensus dsRNA-activated protein kinase inhibitor | 99.36 | |
| TIGR00990 | 615 | 3a0801s09 mitochondrial precursor proteins import | 99.36 | |
| KOG1243 | 690 | consensus Protein kinase [General function predict | 99.36 | |
| cd05151 | 170 | ChoK Choline Kinase (ChoK). The ChoK subfamily is | 99.34 | |
| KOG0551 | 390 | consensus Hsp90 co-chaperone CNS1 (contains TPR re | 99.34 | |
| KOG0545 | 329 | consensus Aryl-hydrocarbon receptor-interacting pr | 99.34 | |
| COG3063 | 250 | PilF Tfp pilus assembly protein PilF [Cell motilit | 99.33 | |
| KOG1126 | 638 | consensus DNA-binding cell division cycle control | 99.33 | |
| TIGR01982 | 437 | UbiB 2-polyprenylphenol 6-hydroxylase. This model | 99.31 | |
| KOG4555 | 175 | consensus TPR repeat-containing protein [Function | 99.31 | |
| TIGR02795 | 119 | tol_pal_ybgF tol-pal system protein YbgF. Members | 99.3 | |
| PF12895 | 84 | Apc3: Anaphase-promoting complex, cyclosome, subun | 99.29 | |
| KOG0376 | 476 | consensus Serine-threonine phosphatase 2A, catalyt | 99.27 | |
| cd00189 | 100 | TPR Tetratricopeptide repeat domain; typically con | 99.27 | |
| PF13414 | 69 | TPR_11: TPR repeat; PDB: 2HO1_B 2FI7_B 2DBA_A 3Q4A | 99.26 | |
| PRK02603 | 172 | photosystem I assembly protein Ycf3; Provisional | 99.25 | |
| TIGR00990 | 615 | 3a0801s09 mitochondrial precursor proteins import | 99.25 | |
| COG3642 | 204 | Mn2+-dependent serine/threonine protein kinase [Si | 99.24 | |
| PRK09782 | 987 | bacteriophage N4 receptor, outer membrane subunit; | 99.22 | |
| CHL00033 | 168 | ycf3 photosystem I assembly protein Ycf3 | 99.22 | |
| PRK15179 | 694 | Vi polysaccharide biosynthesis protein TviE; Provi | 99.2 | |
| PLN02789 | 320 | farnesyltranstransferase | 99.19 | |
| PRK15331 | 165 | chaperone protein SicA; Provisional | 99.19 | |
| KOG3087 | 229 | consensus Serine/threonine protein kinase [General | 99.19 | |
| KOG0601 | 524 | consensus Cyclin-dependent kinase WEE1 [Cell cycle | 99.19 | |
| cd05146 | 197 | RIO3_euk RIO kinase family; eukaryotic RIO3, catal | 99.17 | |
| PF13432 | 65 | TPR_16: Tetratricopeptide repeat; PDB: 3CVP_A 3CVL | 99.16 | |
| PRK12370 | 553 | invasion protein regulator; Provisional | 99.15 | |
| PRK15359 | 144 | type III secretion system chaperone protein SscB; | 99.15 | |
| PRK10370 | 198 | formate-dependent nitrite reductase complex subuni | 99.14 | |
| PRK15123 | 268 | lipopolysaccharide core heptose(I) kinase RfaP; Pr | 99.14 | |
| KOG0547 | 606 | consensus Translocase of outer mitochondrial membr | 99.13 | |
| PRK04750 | 537 | ubiB putative ubiquinone biosynthesis protein UbiB | 99.13 | |
| KOG1155 | 559 | consensus Anaphase-promoting complex (APC), Cdc23 | 99.12 | |
| PF13432 | 65 | TPR_16: Tetratricopeptide repeat; PDB: 3CVP_A 3CVL | 99.12 | |
| COG5010 | 257 | TadD Flp pilus assembly protein TadD, contains TPR | 99.1 | |
| PRK12370 | 553 | invasion protein regulator; Provisional | 99.1 | |
| TIGR03302 | 235 | OM_YfiO outer membrane assembly lipoprotein YfiO. | 99.1 | |
| TIGR02521 | 234 | type_IV_pilW type IV pilus biogenesis/stability pr | 99.09 | |
| KOG0606 | 1205 | consensus Microtubule-associated serine/threonine | 99.07 | |
| KOG1126 | 638 | consensus DNA-binding cell division cycle control | 99.07 | |
| COG3063 | 250 | PilF Tfp pilus assembly protein PilF [Cell motilit | 99.06 | |
| KOG2137 | 700 | consensus Protein kinase [Signal transduction mech | 99.05 | |
| PRK15179 | 694 | Vi polysaccharide biosynthesis protein TviE; Provi | 99.05 | |
| PRK10803 | 263 | tol-pal system protein YbgF; Provisional | 99.05 |
| >KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-51 Score=384.29 Aligned_cols=245 Identities=24% Similarity=0.383 Sum_probs=214.9
Q ss_pred CCCcccceeeeecce-ecccccCCCchh---hhHHHHHHHHHhcCCCcCcceeEEEEEeCC-eeeEEEecCCCCCHHhHh
Q 014478 2 GGRCSKFSICWFHCH-LKSSVLESSDLG---ETLNLEEAKAVGNLRSERLANLIGCCYEAD-ERLLVAEFMPNETLAKHL 76 (424)
Q Consensus 2 G~~g~v~~~~~~~~~-v~~~~~~~~~~~---~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-~~~lv~e~~~~gsL~~~l 76 (424)
|++|.||++.|.+.. |++|++.....+ .+.|.+|+.+|.+++|||||+|+|+|.... ..+|||||+++|+|.+++
T Consensus 52 G~~g~V~~~~~~g~~~vavK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~f~G~~~~~~~~~~iVtEy~~~GsL~~~l 131 (362)
T KOG0192|consen 52 GSFGTVYKGKWRGTDVVAVKIISDPDFDDESRKAFRREASLLSRLRHPNIVQFYGACTSPPGSLCIVTEYMPGGSLSVLL 131 (362)
T ss_pred CCceeEEEEEeCCceeEEEEEecchhcChHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCceEEEEEeCCCCcHHHHH
Confidence 899999999999999 999988765533 558999999999999999999999999987 789999999999999999
Q ss_pred ccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCC-CeEEccccccccCCC----CCccccCccCC
Q 014478 77 FHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDG-NPRLSSFGLMKNSRD----GKSYSTNLAFT 151 (424)
Q Consensus 77 ~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~-~~kl~Dfg~~~~~~~----~~~~~gt~~y~ 151 (424)
.......+++..+++|+.||++||.|||++++||||||||+|||++.++ ++||+|||+++.... .....||+.||
T Consensus 132 ~~~~~~~l~~~~~l~~aldiArGm~YLH~~~~iIHrDLK~~NiLv~~~~~~~KI~DFGlsr~~~~~~~~~~~~~GT~~wM 211 (362)
T KOG0192|consen 132 HKKRKRKLPLKVRLRIALDIARGMEYLHSEGPIIHRDLKSDNILVDLKGKTLKIADFGLSREKVISKTSMTSVAGTYRWM 211 (362)
T ss_pred hhcccCCCCHHHHHHHHHHHHHHHHHHhcCCCeeecccChhhEEEcCCCCEEEECCCccceeeccccccccCCCCCcccc
Confidence 7644678999999999999999999999998789999999999999997 999999999986553 23357999999
Q ss_pred Cccccc--cCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHHHHHHHHHhcccCc
Q 014478 152 PPEYMR--TGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEA 229 (424)
Q Consensus 152 aPE~~~--~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp 229 (424)
|||++. ...++.|+||||||+++|||+||+.||.... ........+....+..+|..+++.+..++.+||..||
T Consensus 212 APEv~~~~~~~~~~K~DvySFgIvlWEl~t~~~Pf~~~~----~~~~~~~v~~~~~Rp~~p~~~~~~l~~l~~~CW~~dp 287 (362)
T KOG0192|consen 212 APEVLRGEKSPYTEKSDVYSFGIVLWELLTGEIPFEDLA----PVQVASAVVVGGLRPPIPKECPPHLSSLMERCWLVDP 287 (362)
T ss_pred ChhhhcCCCCcCCccchhhhHHHHHHHHHHCCCCCCCCC----HHHHHHHHHhcCCCCCCCccCCHHHHHHHHHhCCCCC
Confidence 999999 5689999999999999999999998988752 2233334444566667777799999999999999999
Q ss_pred CCCCCHHHHHHHHHHHhhhhh
Q 014478 230 RERPNAKSLVISLMSLQKEAE 250 (424)
Q Consensus 230 ~~Rps~~~~~~~l~~~~~~~~ 250 (424)
..||++.+++..|+.+.....
T Consensus 288 ~~RP~f~ei~~~l~~~~~~~~ 308 (362)
T KOG0192|consen 288 SRRPSFLEIVSRLESIMSHIS 308 (362)
T ss_pred CcCCCHHHHHHHHHHHHHhhc
Confidence 999999999999999887544
|
|
| >KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.6e-52 Score=369.37 Aligned_cols=241 Identities=17% Similarity=0.259 Sum_probs=201.8
Q ss_pred CCCcccceeee--ecceeccccc--CCCchhhhHHHHHHHHHhcCCCcCcceeEEEEEeCC-eeeEEEecCCCCCHHhHh
Q 014478 2 GGRCSKFSICW--FHCHLKSSVL--ESSDLGETLNLEEAKAVGNLRSERLANLIGCCYEAD-ERLLVAEFMPNETLAKHL 76 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~--~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-~~~lv~e~~~~gsL~~~l 76 (424)
|+.|+||++.+ .+..+|.|++ ..+....+++.+|++++++.+||+||.+||.|..+. ..+|+||||+||||.+++
T Consensus 90 G~gG~V~kv~Hk~t~~i~AlK~I~~~~~~~~~~Qi~rEl~il~~~~spyIV~~ygaF~~~~~~isI~mEYMDgGSLd~~~ 169 (364)
T KOG0581|consen 90 GNGGTVYKVRHKPTGKIYALKVILLNIDPALQKQILRELEILRSCQSPYIVGFYGAFYSNGEEISICMEYMDGGSLDDIL 169 (364)
T ss_pred CCCcEEEEEEEcCCCeEEEEEeecccCCHHHHHHHHHHHHHHhhCCCCCeeeEeEEEEeCCceEEeehhhcCCCCHHHHH
Confidence 67788888877 4666777777 455556789999999999999999999999999998 499999999999999999
Q ss_pred ccCCCCCCCHHHHHHHHHHHHHHHHHHHh-CCCcccccCCCCCeeecCCCCeEEccccccccCCCC--CccccCccCCCc
Q 014478 77 FHWETQPMKWAMRLRVALYLAQALEYCSS-KGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG--KSYSTNLAFTPP 153 (424)
Q Consensus 77 ~~~~~~~l~~~~~~~i~~qi~~~L~~lH~-~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~--~~~~gt~~y~aP 153 (424)
.. .+.+++...-+++.+|++||.|||+ .+ ||||||||+|||++..|.+||||||.++....+ .++.||..||||
T Consensus 170 k~--~g~i~E~~L~~ia~~VL~GL~YLh~~~~-IIHRDIKPsNlLvNskGeVKicDFGVS~~lvnS~a~tfvGT~~YMsP 246 (364)
T KOG0581|consen 170 KR--VGRIPEPVLGKIARAVLRGLSYLHEERK-IIHRDIKPSNLLVNSKGEVKICDFGVSGILVNSIANTFVGTSAYMSP 246 (364)
T ss_pred hh--cCCCCHHHHHHHHHHHHHHHHHHhhccC-eeeccCCHHHeeeccCCCEEeccccccHHhhhhhcccccccccccCh
Confidence 64 4779999999999999999999996 66 999999999999999999999999999876654 567899999999
Q ss_pred cccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhcccCCCCCch-hHHHHHHHHHHhcccCcCCC
Q 014478 154 EYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSND-EGTELVRLASRCLQSEARER 232 (424)
Q Consensus 154 E~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~li~~cl~~dp~~R 232 (424)
|.+.+..|+.++||||||++++|+.+|+.|++........-......+-...++..|.. ++++++.||..||++||.+|
T Consensus 247 ERi~g~~Ys~~sDIWSLGLsllE~a~GrfP~~~~~~~~~~~~~Ll~~Iv~~ppP~lP~~~fS~ef~~FV~~CL~Kdp~~R 326 (364)
T KOG0581|consen 247 ERISGESYSVKSDIWSLGLSLLELAIGRFPYPPPNPPYLDIFELLCAIVDEPPPRLPEGEFSPEFRSFVSCCLRKDPSER 326 (364)
T ss_pred hhhcCCcCCcccceecccHHHHHHhhCCCCCCCcCCCCCCHHHHHHHHhcCCCCCCCcccCCHHHHHHHHHHhcCCcccC
Confidence 99999999999999999999999999998877641111111111122222334455565 89999999999999999999
Q ss_pred CCHHHHHHHHHHH
Q 014478 233 PNAKSLVISLMSL 245 (424)
Q Consensus 233 ps~~~~~~~l~~~ 245 (424)
||++++++|-.-.
T Consensus 327 ~s~~qLl~Hpfi~ 339 (364)
T KOG0581|consen 327 PSAKQLLQHPFIK 339 (364)
T ss_pred CCHHHHhcCHHHh
Confidence 9999999875443
|
|
| >KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-49 Score=368.28 Aligned_cols=241 Identities=24% Similarity=0.373 Sum_probs=217.8
Q ss_pred CCCcccceeeeecc-eecccccCCCchhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHhHhccCC
Q 014478 2 GGRCSKFSICWFHC-HLKSSVLESSDLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWE 80 (424)
Q Consensus 2 G~~g~v~~~~~~~~-~v~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~ 80 (424)
|-||.|+.+.|.+. .|++|.+.......+.|.+|+++|++|+|+|||+++|+|...+.++||||||+.|+|.++|++.+
T Consensus 217 G~FG~V~~g~~~~~~~vavk~ik~~~m~~~~f~~Ea~iMk~L~H~~lV~l~gV~~~~~piyIVtE~m~~GsLl~yLr~~~ 296 (468)
T KOG0197|consen 217 GQFGEVWLGKWNGSTKVAVKTIKEGSMSPEAFLREAQIMKKLRHEKLVKLYGVCTKQEPIYIVTEYMPKGSLLDYLRTRE 296 (468)
T ss_pred CccceEEEEEEcCCCcccceEEeccccChhHHHHHHHHHHhCcccCeEEEEEEEecCCceEEEEEecccCcHHHHhhhcC
Confidence 78999999999877 89999988877788899999999999999999999999999889999999999999999998767
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCCCc-----cccCccCCCccc
Q 014478 81 TQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKS-----YSTNLAFTPPEY 155 (424)
Q Consensus 81 ~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~~~-----~~gt~~y~aPE~ 155 (424)
+..+...+.+.++.|||+||+||++++ +|||||...|||++++..+||+|||+++...+... ..-.+.|+|||.
T Consensus 297 ~~~l~~~~Ll~~a~qIaeGM~YLes~~-~IHRDLAARNiLV~~~~~vKIsDFGLAr~~~d~~Y~~~~~~kfPIkWtAPEa 375 (468)
T KOG0197|consen 297 GGLLNLPQLLDFAAQIAEGMAYLESKN-YIHRDLAARNILVDEDLVVKISDFGLARLIGDDEYTASEGGKFPIKWTAPEA 375 (468)
T ss_pred CCccchHHHHHHHHHHHHHHHHHHhCC-ccchhhhhhheeeccCceEEEcccccccccCCCceeecCCCCCCceecCHHH
Confidence 788999999999999999999999999 99999999999999999999999999996554322 223578999999
Q ss_pred cccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHHHHHHHHHhcccCcCCCCCH
Q 014478 156 MRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERPNA 235 (424)
Q Consensus 156 ~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~ 235 (424)
+..+.++.+||||||||+||||+|-...++.. +....+.+.++...+.+.|..||+++.+++..||..+|++|||+
T Consensus 376 ~~~~~FS~kSDVWSFGVlL~E~fT~G~~py~~----msn~ev~~~le~GyRlp~P~~CP~~vY~lM~~CW~~~P~~RPtF 451 (468)
T KOG0197|consen 376 LNYGKFSSKSDVWSFGVLLWELFTYGRVPYPG----MSNEEVLELLERGYRLPRPEGCPDEVYELMKSCWHEDPEDRPTF 451 (468)
T ss_pred HhhCCcccccceeehhhhHHHHhccCCCCCCC----CCHHHHHHHHhccCcCCCCCCCCHHHHHHHHHHhhCCcccCCCH
Confidence 99999999999999999999999955444332 56777888889999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhh
Q 014478 236 KSLVISLMSLQK 247 (424)
Q Consensus 236 ~~~~~~l~~~~~ 247 (424)
+.+...|..+..
T Consensus 452 ~~L~~~l~~~~~ 463 (468)
T KOG0197|consen 452 ETLREVLEDFFT 463 (468)
T ss_pred HHHHHHHHHhhh
Confidence 998888877654
|
|
| >KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-49 Score=339.72 Aligned_cols=238 Identities=16% Similarity=0.217 Sum_probs=197.3
Q ss_pred CCCcccceeee--ecceecccccCCCc---hhhhHHHHHHHHHhcCCCcCcceeEE-EEEeCCe-eeEEEecCCCCCHHh
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESSD---LGETLNLEEAKAVGNLRSERLANLIG-CCYEADE-RLLVAEFMPNETLAK 74 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~~---~~~~~~~~E~~~l~~l~h~~iv~~~~-~~~~~~~-~~lv~e~~~~gsL~~ 74 (424)
|+||.||++.. .+..++-|.+.-.. ..++....|+.+|++|+|||||++++ .+.++.+ ++||||||++|+|..
T Consensus 30 GsFg~vykv~~~~~g~l~a~K~i~f~~md~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f~~~~evlnivmE~c~~GDLsq 109 (375)
T KOG0591|consen 30 GSFGEVYKVQCLLDGKLVALKKIQFGMMDAKARQDCVKEISLLKQLNHPNIVQYYAHSFIEDNEVLNIVMELCDAGDLSQ 109 (375)
T ss_pred CcchheEEeeeccCcchhhhhhcchhhccHHHHHHHHHHHHHHHhcCCchHHHHHHHhhhccchhhHHHHHhhcccCHHH
Confidence 89999999975 67777777775433 34678889999999999999999999 5555555 889999999999999
Q ss_pred HhccC--CCCCCCHHHHHHHHHHHHHHHHHHHhC---CCcccccCCCCCeeecCCCCeEEccccccccCCCCC----ccc
Q 014478 75 HLFHW--ETQPMKWAMRLRVALYLAQALEYCSSK---GRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGK----SYS 145 (424)
Q Consensus 75 ~l~~~--~~~~l~~~~~~~i~~qi~~~L~~lH~~---~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~~----~~~ 145 (424)
.+++. +++.+++.++|+++.|+|.||.++|.+ +-|+||||||.||+|+.+|.|||+|||+++...... +..
T Consensus 110 mIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~~~r~~VmHRDIKPaNIFl~~~gvvKLGDfGL~r~l~s~~tfA~S~V 189 (375)
T KOG0591|consen 110 MIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHSKIPRGTVMHRDIKPANIFLTANGVVKLGDFGLGRFLSSKTTFAHSLV 189 (375)
T ss_pred HHHHHHhccccCchHHHHHHHHHHHHHHHHHhccccccceeeccCcchheEEcCCCceeeccchhHhHhcchhHHHHhhc
Confidence 98643 567899999999999999999999993 239999999999999999999999999999887653 568
Q ss_pred cCccCCCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhcccCCCCC-chhHHHHHHHHHHh
Q 014478 146 TNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFS-NDEGTELVRLASRC 224 (424)
Q Consensus 146 gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~li~~c 224 (424)
|||.||+||.+.+.+|+++|||||+||++|||+.-++||.+...... ...+...-..+.| .-.|.++.++|..|
T Consensus 190 GTPyYMSPE~i~~~~Y~~kSDiWslGCllyEMcaL~~PF~g~n~~~L-----~~KI~qgd~~~~p~~~YS~~l~~li~~c 264 (375)
T KOG0591|consen 190 GTPYYMSPERIHESGYNFKSDIWSLGCLLYEMCALQSPFYGDNLLSL-----CKKIEQGDYPPLPDEHYSTDLRELINMC 264 (375)
T ss_pred CCCcccCHHHHhcCCCCcchhHHHHHHHHHHHHhcCCCcccccHHHH-----HHHHHcCCCCCCcHHHhhhHHHHHHHHH
Confidence 99999999999999999999999999999999999999988622211 1122222233344 56789999999999
Q ss_pred cccCcCCCCCHHHHHHHHHH
Q 014478 225 LQSEARERPNAKSLVISLMS 244 (424)
Q Consensus 225 l~~dp~~Rps~~~~~~~l~~ 244 (424)
+..||..||+.-.++..+..
T Consensus 265 i~vd~~~RP~t~~~v~di~~ 284 (375)
T KOG0591|consen 265 IAVDPEQRPDTVPYVQDIQS 284 (375)
T ss_pred ccCCcccCCCcchHHHHHHH
Confidence 99999999997666555443
|
|
| >KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-47 Score=344.51 Aligned_cols=235 Identities=17% Similarity=0.223 Sum_probs=197.7
Q ss_pred CCCCcccceeee--ecceecccccCCCc---hhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHhH
Q 014478 1 MGGRCSKFSICW--FHCHLKSSVLESSD---LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKH 75 (424)
Q Consensus 1 ~G~~g~v~~~~~--~~~~v~~~~~~~~~---~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~ 75 (424)
+|+|++||++.. .+..|++|.+..+. ...+.+..|+.+|+.++|||||+++++++.++.+|||||||.||+|.+|
T Consensus 20 ~GsfavVykg~h~~~~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel~H~nIV~l~d~~~~~~~i~lVMEyC~gGDLs~y 99 (429)
T KOG0595|consen 20 SGSFAVVYKGRHKKSGTEVAIKCIAKKKLNKKLVELLLSEIKILKELKHPNIVRLLDCIEDDDFIYLVMEYCNGGDLSDY 99 (429)
T ss_pred CcceEEEEEeEeccCCceEEeeeehhhccCHHHHHHHHHHHHHHHhcCCcceeeEEEEEecCCeEEEEEEeCCCCCHHHH
Confidence 599999999987 66888888886553 3466788999999999999999999999999999999999999999999
Q ss_pred hccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCC------CCeEEccccccccCCCC---Ccccc
Q 014478 76 LFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKD------GNPRLSSFGLMKNSRDG---KSYST 146 (424)
Q Consensus 76 l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~------~~~kl~Dfg~~~~~~~~---~~~~g 146 (424)
|+. .+.+++.++..++.||+.||++||+++ ||||||||.||||+.. -.+||+|||+++....+ .+.+|
T Consensus 100 i~~--~~~l~e~t~r~Fm~QLA~alq~L~~~~-IiHRDLKPQNiLLs~~~~~~~~~~LKIADFGfAR~L~~~~~a~tlcG 176 (429)
T KOG0595|consen 100 IRR--RGRLPEATARHFMQQLASALQFLHENN-IIHRDLKPQNILLSTTARNDTSPVLKIADFGFARFLQPGSMAETLCG 176 (429)
T ss_pred HHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-eeeccCCcceEEeccCCCCCCCceEEecccchhhhCCchhHHHHhhC
Confidence 975 558999999999999999999999999 9999999999999764 35899999999988866 45689
Q ss_pred CccCCCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHHHHHHHHHhcc
Q 014478 147 NLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQ 226 (424)
Q Consensus 147 t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~ 226 (424)
++.|||||++....|+.|+|+||+|+++|+|++|+.||.......... . -..........+...+..+.+++...+.
T Consensus 177 SplYMAPEV~~~~~YdAKADLWSiG~Ilyq~l~g~~Pf~a~t~~eL~~--~-~~k~~~~~~~~~~~~s~~~~~Ll~~ll~ 253 (429)
T KOG0595|consen 177 SPLYMAPEVIMSQQYDAKADLWSIGTILYQCLTGKPPFDAETPKELLL--Y-IKKGNEIVPVLPAELSNPLRELLISLLQ 253 (429)
T ss_pred CccccCHHHHHhccccchhhHHHHHHHHHHHHhCCCCccccCHHHHHH--H-HhccccccCchhhhccCchhhhhhHHHh
Confidence 999999999999999999999999999999999999888653332222 1 1112223333445566678899999999
Q ss_pred cCcCCCCCHHHHHHH
Q 014478 227 SEARERPNAKSLVIS 241 (424)
Q Consensus 227 ~dp~~Rps~~~~~~~ 241 (424)
.+|.+|.++.+...+
T Consensus 254 ~~~~~~~~~~~~~~~ 268 (429)
T KOG0595|consen 254 RNPKDRISFEDFFDH 268 (429)
T ss_pred cCccccCchHHhhhh
Confidence 999999887776644
|
|
| >KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-47 Score=360.70 Aligned_cols=231 Identities=16% Similarity=0.215 Sum_probs=203.0
Q ss_pred CCCcccceeee--ecceecccccCC----CchhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHhH
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLES----SDLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKH 75 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~----~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~ 75 (424)
|||..+|.+.. .+..+|+|++.+ +...++...+||++.++|+|||||+++++|++.++.|||.|+|+.++|..+
T Consensus 29 GgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~HpnIV~f~~~FEDs~nVYivLELC~~~sL~el 108 (592)
T KOG0575|consen 29 GGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHPNIVQFYHFFEDSNNVYIVLELCHRGSLMEL 108 (592)
T ss_pred CcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCCCcEEeeeeEeecCCceEEEEEecCCccHHHH
Confidence 89999999987 778899988866 555678889999999999999999999999999999999999999999999
Q ss_pred hccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCC----CccccCccCC
Q 014478 76 LFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG----KSYSTNLAFT 151 (424)
Q Consensus 76 l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~----~~~~gt~~y~ 151 (424)
+++ ..++++.++..+++||+.||.|||+.+ |||||||..|+|++++.+|||+|||+|...... .+.+||+.|.
T Consensus 109 ~Kr--rk~ltEpEary~l~QIv~GlkYLH~~~-IiHRDLKLGNlfL~~~~~VKIgDFGLAt~le~~~Erk~TlCGTPNYI 185 (592)
T KOG0575|consen 109 LKR--RKPLTEPEARYFLRQIVEGLKYLHSLG-IIHRDLKLGNLFLNENMNVKIGDFGLATQLEYDGERKKTLCGTPNYI 185 (592)
T ss_pred HHh--cCCCCcHHHHHHHHHHHHHHHHHHhcC-ceecccchhheeecCcCcEEecccceeeeecCcccccceecCCCccc
Confidence 974 679999999999999999999999999 999999999999999999999999999877632 4568999999
Q ss_pred CccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHHHHHHHHHhcccCcCC
Q 014478 152 PPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARE 231 (424)
Q Consensus 152 aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~ 231 (424)
|||++.....+..+||||+|||+|-|++|++||........ ...+.... -.+|..++.+..+||.++|+.||.+
T Consensus 186 APEVl~k~gHsfEvDiWSlGcvmYtLL~G~PPFetk~vket----y~~Ik~~~--Y~~P~~ls~~A~dLI~~lL~~~P~~ 259 (592)
T KOG0575|consen 186 APEVLNKSGHSFEVDIWSLGCVMYTLLVGRPPFETKTVKET----YNKIKLNE--YSMPSHLSAEAKDLIRKLLRPNPSE 259 (592)
T ss_pred ChhHhccCCCCCchhhhhhhhHHHhhhhCCCCcccchHHHH----HHHHHhcC--cccccccCHHHHHHHHHHhcCCccc
Confidence 99999988899999999999999999999988876522211 11111111 2356678899999999999999999
Q ss_pred CCCHHHHHHH
Q 014478 232 RPNAKSLVIS 241 (424)
Q Consensus 232 Rps~~~~~~~ 241 (424)
|||+++|+.+
T Consensus 260 Rpsl~~vL~h 269 (592)
T KOG0575|consen 260 RPSLDEVLDH 269 (592)
T ss_pred CCCHHHHhcC
Confidence 9999999976
|
|
| >KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.8e-47 Score=355.35 Aligned_cols=245 Identities=33% Similarity=0.546 Sum_probs=205.7
Q ss_pred CCCcccceeeeec-ceecccccCCCchh-hhHHHHHHHHHhcCCCcCcceeEEEEEeCC-eeeEEEecCCCCCHHhHhcc
Q 014478 2 GGRCSKFSICWFH-CHLKSSVLESSDLG-ETLNLEEAKAVGNLRSERLANLIGCCYEAD-ERLLVAEFMPNETLAKHLFH 78 (424)
Q Consensus 2 G~~g~v~~~~~~~-~~v~~~~~~~~~~~-~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-~~~lv~e~~~~gsL~~~l~~ 78 (424)
||||.||++...+ ..|++|++...... ..+|.+|+.+|.+++|||+|+++|+|.+.+ +++||+||+++|||.++|..
T Consensus 86 Ggfg~VYkG~l~~~~~vAVK~~~~~~~~~~~eF~~Ei~~ls~l~H~Nlv~LlGyC~e~~~~~~LVYEym~nGsL~d~L~~ 165 (361)
T KOG1187|consen 86 GGFGTVYKGVLSDGTVVAVKRLSSNSGQGEREFLNEVEILSRLRHPNLVKLLGYCLEGGEHRLLVYEYMPNGSLEDHLHG 165 (361)
T ss_pred CCCeEEEEEEECCCCEEEEEEecCCCCcchhHHHHHHHHHhcCCCcCcccEEEEEecCCceEEEEEEccCCCCHHHHhCC
Confidence 8999999998855 78999987665543 566999999999999999999999999988 59999999999999999976
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHhCC--CcccccCCCCCeeecCCCCeEEccccccccCCC-CCcc----ccCccCC
Q 014478 79 WETQPMKWAMRLRVALYLAQALEYCSSKG--RALYHDLNAYRILFDKDGNPRLSSFGLMKNSRD-GKSY----STNLAFT 151 (424)
Q Consensus 79 ~~~~~l~~~~~~~i~~qi~~~L~~lH~~~--~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~-~~~~----~gt~~y~ 151 (424)
....+++|.++++|+.++|+||+|||... +||||||||+|||+|.++++||+|||+++.... .... .||.+|+
T Consensus 166 ~~~~~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILLD~~~~aKlsDFGLa~~~~~~~~~~~~~~~gt~gY~ 245 (361)
T KOG1187|consen 166 KKGEPLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILLDEDFNAKLSDFGLAKLGPEGDTSVSTTVMGTFGYL 245 (361)
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeECCCCCEEccCccCcccCCccccceeeecCCCCccC
Confidence 33328999999999999999999999965 499999999999999999999999999987664 3322 7999999
Q ss_pred CccccccCCCCCCcceehhHHHHHHHhhCCCCCCch-----------hhHHHhhhhhhHhhhcccC-CCCCc-hhHHHHH
Q 014478 152 PPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSH-----------ALDLIRSKNFLLLMDSALE-GHFSN-DEGTELV 218 (424)
Q Consensus 152 aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~-----------~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~l~ 218 (424)
+||++..+..+.|+||||||++++||+||+.+.... ....+....+.+++++.+. ...+. ..-..+.
T Consensus 246 ~PEy~~~g~lt~KsDVySFGVvllElitgr~~~d~~~~~~~~~l~~w~~~~~~~~~~~eiiD~~l~~~~~~~~~~~~~~~ 325 (361)
T KOG1187|consen 246 APEYASTGKLTEKSDVYSFGVVLLELITGRKAVDQSRPRGELSLVEWAKPLLEEGKLREIVDPRLKEGEYPDEKEVKKLA 325 (361)
T ss_pred ChhhhccCCcCcccccccchHHHHHHHhCCcccCCCCCcccccHHHHHHHHHHCcchhheeCCCccCCCCChHHHHHHHH
Confidence 999999999999999999999999999999654421 1123333456667777665 44443 4556688
Q ss_pred HHHHHhcccCcCCCCCHHHHHHHHHHHh
Q 014478 219 RLASRCLQSEARERPNAKSLVISLMSLQ 246 (424)
Q Consensus 219 ~li~~cl~~dp~~Rps~~~~~~~l~~~~ 246 (424)
.+..+|++.+|.+||+|.+|++.|+.+.
T Consensus 326 ~~a~~C~~~~~~~RP~m~~Vv~~L~~~~ 353 (361)
T KOG1187|consen 326 ELALRCLRPDPKERPTMSQVVKELEGIL 353 (361)
T ss_pred HHHHHHcCcCCCcCcCHHHHHHHHHhhc
Confidence 9999999999999999999998885544
|
|
| >KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-47 Score=344.20 Aligned_cols=235 Identities=16% Similarity=0.199 Sum_probs=192.1
Q ss_pred CCCcccceeee--ecceecccccCCCchh--------hhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCC
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESSDLG--------ETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNET 71 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~~~~--------~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gs 71 (424)
|+||.|-.+.. .+..+|+|++.+.... .....+|+++|++|+|||||+++++|...+..||||||++||+
T Consensus 183 Gafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~d~f~~~ds~YmVlE~v~GGe 262 (475)
T KOG0615|consen 183 GAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIKDFFEVPDSSYMVLEYVEGGE 262 (475)
T ss_pred CceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEeeeeecCCceEEEEEEecCcc
Confidence 77888877776 6788888888543321 1234689999999999999999999999999999999999999
Q ss_pred HHhHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCC---CCeEEccccccccCCCC---Cccc
Q 014478 72 LAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKD---GNPRLSSFGLMKNSRDG---KSYS 145 (424)
Q Consensus 72 L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~---~~~kl~Dfg~~~~~~~~---~~~~ 145 (424)
|.+.+.. .+.+.+.....+++|++.|+.|||++| |+||||||+|||+..+ -.+||+|||+|+..... .+.+
T Consensus 263 Lfd~vv~--nk~l~ed~~K~~f~Qll~avkYLH~~G-I~HRDiKPeNILl~~~~e~~llKItDFGlAK~~g~~sfm~TlC 339 (475)
T KOG0615|consen 263 LFDKVVA--NKYLREDLGKLLFKQLLTAVKYLHSQG-IIHRDIKPENILLSNDAEDCLLKITDFGLAKVSGEGSFMKTLC 339 (475)
T ss_pred HHHHHHh--ccccccchhHHHHHHHHHHHHHHHHcC-cccccCCcceEEeccCCcceEEEecccchhhccccceehhhhc
Confidence 9999975 567888888999999999999999999 9999999999999766 56999999999988654 4679
Q ss_pred cCccCCCccccccCC--CC-CCcceehhHHHHHHHhhCCCCCCchhhHH-HhhhhhhHhhhccc--CCCCCchhHHHHHH
Q 014478 146 TNLAFTPPEYMRTGR--VT-PESVVYSFGTMLLDLLSGKHIPPSHALDL-IRSKNFLLLMDSAL--EGHFSNDEGTELVR 219 (424)
Q Consensus 146 gt~~y~aPE~~~~~~--~~-~~~Dv~slG~~l~el~~g~~~~~~~~~~~-~~~~~~~~~~~~~~--~~~~~~~~~~~l~~ 219 (424)
||+.|.|||++.+.. ++ .+.|+||+||+||-+++|.+||....... ...+ +....+ -+..-..++++..+
T Consensus 340 GTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~pPFS~~~~~~sl~eQ----I~~G~y~f~p~~w~~Iseea~d 415 (475)
T KOG0615|consen 340 GTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSGYPPFSEEYTDPSLKEQ----ILKGRYAFGPLQWDRISEEALD 415 (475)
T ss_pred CCccccChhheecCCeecccchheeeeccceEEEEeccCCCcccccCCccHHHH----HhcCcccccChhhhhhhHHHHH
Confidence 999999999998664 33 37899999999999999999988753332 1111 111111 11222357899999
Q ss_pred HHHHhcccCcCCCCCHHHHHHHHH
Q 014478 220 LASRCLQSEARERPNAKSLVISLM 243 (424)
Q Consensus 220 li~~cl~~dp~~Rps~~~~~~~l~ 243 (424)
||.+||..||++|||+.|++++-+
T Consensus 416 lI~~mL~VdP~~R~s~~eaL~hpW 439 (475)
T KOG0615|consen 416 LINWMLVVDPENRPSADEALNHPW 439 (475)
T ss_pred HHHHhhEeCcccCcCHHHHhcChh
Confidence 999999999999999999998744
|
|
| >KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-47 Score=356.64 Aligned_cols=232 Identities=18% Similarity=0.287 Sum_probs=200.9
Q ss_pred CCCcccceeee--ecceecccccCCCchh-hhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHhHhcc
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESSDLG-ETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFH 78 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~~~~-~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~ 78 (424)
|..|+||.+.. .+..||+|.+....+. ++.+++|+.+|+..+|+|||.+++.+..++++|+||||++||+|.+.+.
T Consensus 284 gaSG~vy~A~~~~~~~~VaiK~m~l~~Q~~keLilnEi~Vm~~~~H~NiVnfl~Sylv~deLWVVMEym~ggsLTDvVt- 362 (550)
T KOG0578|consen 284 GATGGVYVARKISTKQEVAIKRMDLRKQPKKELLLNEILVMRDLHHPNIVNFLDSYLVGDELWVVMEYMEGGSLTDVVT- 362 (550)
T ss_pred ccccceeeeeeccCCceEEEEEEEeccCCchhhhHHHHHHHHhccchHHHHHHHHhcccceeEEEEeecCCCchhhhhh-
Confidence 78899998876 5667888888655544 6678899999999999999999999999999999999999999999994
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCC----CccccCccCCCcc
Q 014478 79 WETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG----KSYSTNLAFTPPE 154 (424)
Q Consensus 79 ~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~----~~~~gt~~y~aPE 154 (424)
...+++.++..|+++++.||+|||.++ |+|||||.+|||++.+|.+||+|||+|...... .+..||+.|||||
T Consensus 363 --~~~~~E~qIA~Icre~l~aL~fLH~~g-IiHrDIKSDnILL~~~g~vKltDFGFcaqi~~~~~KR~TmVGTPYWMAPE 439 (550)
T KOG0578|consen 363 --KTRMTEGQIAAICREILQGLKFLHARG-IIHRDIKSDNILLTMDGSVKLTDFGFCAQISEEQSKRSTMVGTPYWMAPE 439 (550)
T ss_pred --cccccHHHHHHHHHHHHHHHHHHHhcc-eeeeccccceeEeccCCcEEEeeeeeeeccccccCccccccCCCCccchh
Confidence 467999999999999999999999999 999999999999999999999999999877654 3567999999999
Q ss_pred ccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhh-hcccCCCCCchhHHHHHHHHHHhcccCcCCCC
Q 014478 155 YMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLM-DSALEGHFSNDEGTELVRLASRCLQSEARERP 233 (424)
Q Consensus 155 ~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rp 233 (424)
++....|+++.||||||++++||+-|++|+..+ ...+....+. ........+..+++.+++|+.+||+.|+.+|+
T Consensus 440 Vvtrk~YG~KVDIWSLGIMaIEMveGEPPYlnE----~PlrAlyLIa~ng~P~lk~~~klS~~~kdFL~~cL~~dv~~Ra 515 (550)
T KOG0578|consen 440 VVTRKPYGPKVDIWSLGIMAIEMVEGEPPYLNE----NPLRALYLIATNGTPKLKNPEKLSPELKDFLDRCLVVDVEQRA 515 (550)
T ss_pred hhhhcccCccccchhhhhHHHHHhcCCCCccCC----ChHHHHHHHhhcCCCCcCCccccCHHHHHHHHHHhhcchhcCC
Confidence 999999999999999999999999999887653 1112222222 22334455677899999999999999999999
Q ss_pred CHHHHHHH
Q 014478 234 NAKSLVIS 241 (424)
Q Consensus 234 s~~~~~~~ 241 (424)
|+.|+|+|
T Consensus 516 sA~eLL~H 523 (550)
T KOG0578|consen 516 SAKELLEH 523 (550)
T ss_pred CHHHHhcC
Confidence 99999976
|
|
| >KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.2e-46 Score=335.59 Aligned_cols=240 Identities=20% Similarity=0.304 Sum_probs=194.1
Q ss_pred CCCcccceeeee--cceecccccCCCch-hhhHHHHHHHHHhcCCCcCcceeEEEEEeCC--eeeEEEecCCCCCHHhHh
Q 014478 2 GGRCSKFSICWF--HCHLKSSVLESSDL-GETLNLEEAKAVGNLRSERLANLIGCCYEAD--ERLLVAEFMPNETLAKHL 76 (424)
Q Consensus 2 G~~g~v~~~~~~--~~~v~~~~~~~~~~-~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~--~~~lv~e~~~~gsL~~~l 76 (424)
|+||.||.+... +...++|....... ..+.+.+|+++|.+|+|||||+++|...... ..+|.|||+++|+|.+++
T Consensus 28 Gs~G~V~l~~~~~~g~~~AvK~v~~~~~~~~~~l~~Ei~iL~~l~~p~IV~~~G~~~~~~~~~~~i~mEy~~~GsL~~~~ 107 (313)
T KOG0198|consen 28 GSFGSVYLATNKKTGELMAVKSVELEDSPTSESLEREIRILSRLNHPNIVQYYGSSSSRENDEYNIFMEYAPGGSLSDLI 107 (313)
T ss_pred ccceEEEEEEecCCCcceeeeeeecccchhHHHHHHHHHHHHhCCCCCEEeeCCccccccCeeeEeeeeccCCCcHHHHH
Confidence 889999999885 46666665544321 1566889999999999999999999855544 578999999999999999
Q ss_pred ccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecC-CCCeEEccccccccCCC-------CCccccCc
Q 014478 77 FHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDK-DGNPRLSSFGLMKNSRD-------GKSYSTNL 148 (424)
Q Consensus 77 ~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~-~~~~kl~Dfg~~~~~~~-------~~~~~gt~ 148 (424)
.+..+ .+++..+.++.+||++||+|||++| +|||||||+|||++. ++.+||+|||+++.... .....||+
T Consensus 108 ~~~g~-~l~E~~v~~ytr~iL~GL~ylHs~g-~vH~DiK~~NiLl~~~~~~~KlaDFG~a~~~~~~~~~~~~~~~~~Gtp 185 (313)
T KOG0198|consen 108 KRYGG-KLPEPLVRRYTRQILEGLAYLHSKG-IVHCDIKPANILLDPSNGDVKLADFGLAKKLESKGTKSDSELSVQGTP 185 (313)
T ss_pred HHcCC-CCCHHHHHHHHHHHHHHHHHHHhCC-EeccCcccceEEEeCCCCeEEeccCccccccccccccccccccccCCc
Confidence 86444 8999999999999999999999999 999999999999999 79999999999886552 23568999
Q ss_pred cCCCccccccCC-CCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHHHHHHHHHhccc
Q 014478 149 AFTPPEYMRTGR-VTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQS 227 (424)
Q Consensus 149 ~y~aPE~~~~~~-~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~ 227 (424)
.|||||++..+. ...++|||||||++.||+||+.||... . ........+......+.+|..++.+.++|+.+|+..
T Consensus 186 ~~maPEvi~~g~~~~~~sDiWSlGCtVvEM~Tg~~PW~~~-~--~~~~~~~~ig~~~~~P~ip~~ls~~a~~Fl~~C~~~ 262 (313)
T KOG0198|consen 186 NYMAPEVIRNGEVARRESDIWSLGCTVVEMLTGKPPWSEF-F--EEAEALLLIGREDSLPEIPDSLSDEAKDFLRKCFKR 262 (313)
T ss_pred cccCchhhcCCCcCCccchhhhcCCEEEeccCCCCcchhh-c--chHHHHHHHhccCCCCCCCcccCHHHHHHHHHHhhc
Confidence 999999999643 345999999999999999998776642 0 111112222222233477888999999999999999
Q ss_pred CcCCCCCHHHHHHHHHHHh
Q 014478 228 EARERPNAKSLVISLMSLQ 246 (424)
Q Consensus 228 dp~~Rps~~~~~~~l~~~~ 246 (424)
||++|||+++++.+.....
T Consensus 263 ~p~~Rpta~eLL~hpf~~~ 281 (313)
T KOG0198|consen 263 DPEKRPTAEELLEHPFLKQ 281 (313)
T ss_pred CcccCcCHHHHhhChhhhc
Confidence 9999999999998865444
|
|
| >KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-44 Score=322.95 Aligned_cols=232 Identities=19% Similarity=0.241 Sum_probs=196.0
Q ss_pred CCCcccceeee--ecceecccccCCCch----hhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHhH
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESSDL----GETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKH 75 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~~~----~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~ 75 (424)
|+||.||.+.. .+...|.|++.+... ..+....|..+|.+++||.||.++-.|.+...+|||+||+.||.|.-.
T Consensus 36 G~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~hPFiv~l~ysFQt~~kLylVld~~~GGeLf~h 115 (357)
T KOG0598|consen 36 GSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIKHPFIVKLIYSFQTEEKLYLVLDYLNGGELFYH 115 (357)
T ss_pred cCCceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCCCCcEeeeEEecccCCeEEEEEeccCCccHHHH
Confidence 89999998865 566677777765442 356778899999999999999999999999999999999999999999
Q ss_pred hccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCC----CCCccccCccCC
Q 014478 76 LFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSR----DGKSYSTNLAFT 151 (424)
Q Consensus 76 l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~----~~~~~~gt~~y~ 151 (424)
|++ .+.+++..+.-++.+|+.||.|||+++ ||||||||+|||+|.+|+++|+|||+|+... ...+.+||+.||
T Consensus 116 L~~--eg~F~E~~arfYlaEi~lAL~~LH~~g-IiyRDlKPENILLd~~GHi~LtDFgL~k~~~~~~~~t~tfcGT~eYm 192 (357)
T KOG0598|consen 116 LQR--EGRFSEDRARFYLAEIVLALGYLHSKG-IIYRDLKPENILLDEQGHIKLTDFGLCKEDLKDGDATRTFCGTPEYM 192 (357)
T ss_pred HHh--cCCcchhHHHHHHHHHHHHHHHHHhCC-eeeccCCHHHeeecCCCcEEEeccccchhcccCCCccccccCCcccc
Confidence 975 568999999999999999999999999 9999999999999999999999999998543 234579999999
Q ss_pred CccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHHHHHHHHHhcccCcCC
Q 014478 152 PPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARE 231 (424)
Q Consensus 152 aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~ 231 (424)
|||++.+..++..+|.||||+++|||++|.+||.......+... +........|.-++.+.++++.++|..||++
T Consensus 193 APEil~~~gy~~~vDWWsLGillYeML~G~pPF~~~~~~~~~~~-----I~~~k~~~~p~~ls~~ardll~~LL~rdp~~ 267 (357)
T KOG0598|consen 193 APEILLGKGYDKAVDWWSLGILLYEMLTGKPPFYAEDVKKMYDK-----ILKGKLPLPPGYLSEEARDLLKKLLKRDPRQ 267 (357)
T ss_pred ChHHHhcCCCCcccchHhHHHHHHHHhhCCCCCcCccHHHHHHH-----HhcCcCCCCCccCCHHHHHHHHHHhccCHHH
Confidence 99999999999999999999999999999999988643333222 2222223344457889999999999999999
Q ss_pred CC----CHHHHHHH
Q 014478 232 RP----NAKSLVIS 241 (424)
Q Consensus 232 Rp----s~~~~~~~ 241 (424)
|. ++.+|.+|
T Consensus 268 RLg~~~d~~~ik~H 281 (357)
T KOG0598|consen 268 RLGGPGDAEEIKRH 281 (357)
T ss_pred hcCCCCChHHhhcC
Confidence 94 56665443
|
|
| >KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-45 Score=319.35 Aligned_cols=237 Identities=18% Similarity=0.253 Sum_probs=192.8
Q ss_pred CCCcccceeee--ecceecccccCCCchh---hhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHhHh
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESSDLG---ETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHL 76 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~~~~---~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~l 76 (424)
|++|.||++.. ++.-||+|++..++++ .+-.++|+++|++|+|+|+|.++.+|.....+++|+|||+. ++-+.+
T Consensus 13 GSYGvV~KCrnk~TgqIVAIKkF~Esedd~~VkKIAlREIrmLKqLkH~NLVnLiEVFrrkrklhLVFE~~dh-TvL~eL 91 (396)
T KOG0593|consen 13 GSYGVVMKCRNKDTGQIVAIKKFVESEDDPVVKKIALREIRMLKQLKHENLVNLIEVFRRKRKLHLVFEYCDH-TVLHEL 91 (396)
T ss_pred CcceEEEEeccCCcccEEEEEeeccCCccHHHHHHHHHHHHHHHhcccchHHHHHHHHHhcceeEEEeeecch-HHHHHH
Confidence 88999998876 7888999999766653 56788999999999999999999999999999999999988 555556
Q ss_pred ccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCC----CccccCccCCC
Q 014478 77 FHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG----KSYSTNLAFTP 152 (424)
Q Consensus 77 ~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~----~~~~gt~~y~a 152 (424)
.+ ...+++...+.+++.|++.|+.|+|+++ +|||||||+|||++.+|.+||||||+|+..... +....|..|.|
T Consensus 92 e~-~p~G~~~~~vk~~l~Q~l~ai~~cHk~n-~IHRDIKPENILit~~gvvKLCDFGFAR~L~~pgd~YTDYVATRWYRa 169 (396)
T KOG0593|consen 92 ER-YPNGVPSELVKKYLYQLLKAIHFCHKNN-CIHRDIKPENILITQNGVVKLCDFGFARTLSAPGDNYTDYVATRWYRA 169 (396)
T ss_pred Hh-ccCCCCHHHHHHHHHHHHHHhhhhhhcC-eecccCChhheEEecCCcEEeccchhhHhhcCCcchhhhhhhhhhccC
Confidence 54 4567999999999999999999999999 999999999999999999999999999987733 34567999999
Q ss_pred cccccc-CCCCCCcceehhHHHHHHHhhCCCCCCchhhH--HHhhh------------------hhhHhhhcccCC----
Q 014478 153 PEYMRT-GRVTPESVVYSFGTMLLDLLSGKHIPPSHALD--LIRSK------------------NFLLLMDSALEG---- 207 (424)
Q Consensus 153 PE~~~~-~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~--~~~~~------------------~~~~~~~~~~~~---- 207 (424)
||.+.+ .+|....||||+||++.||++|.+.||+.+.- ..... .+..+.-+.+..
T Consensus 170 PELLvGDtqYG~pVDiWAiGCv~aEl~~G~pL~PG~SDiDQLy~I~ktLG~L~prhq~iF~~N~~F~Gv~lP~~~~~epL 249 (396)
T KOG0593|consen 170 PELLVGDTQYGKPVDIWAIGCVFAELLTGEPLWPGRSDIDQLYLIRKTLGNLIPRHQSIFSSNPFFHGVRLPEPEHPEPL 249 (396)
T ss_pred hhhhcccCcCCCcccchhhhHHHHHHhcCCcCCCCcchHHHHHHHHHHHcccCHHHHHHhccCCceeeeecCCCCCccch
Confidence 999987 57999999999999999999999989875211 10000 000000000000
Q ss_pred -CCCchhHHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 014478 208 -HFSNDEGTELVRLASRCLQSEARERPNAKSLVIS 241 (424)
Q Consensus 208 -~~~~~~~~~l~~li~~cl~~dp~~Rps~~~~~~~ 241 (424)
..-+..+.-+.+|+..||..||++|++.++++.+
T Consensus 250 e~k~p~~s~~~ld~~k~cL~~dP~~R~sc~qll~H 284 (396)
T KOG0593|consen 250 ERKYPKISNVLLDLLKKCLKMDPDDRLSCEQLLHH 284 (396)
T ss_pred hhhcccchHHHHHHHHHHhcCCccccccHHHHhcC
Confidence 0012345678999999999999999999999875
|
|
| >PHA02988 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.9e-44 Score=329.93 Aligned_cols=239 Identities=15% Similarity=0.199 Sum_probs=200.5
Q ss_pred CCCcccceeeeecceecccccCCCchh----hhHHHHHHHHHhcCCCcCcceeEEEEEe----CCeeeEEEecCCCCCHH
Q 014478 2 GGRCSKFSICWFHCHLKSSVLESSDLG----ETLNLEEAKAVGNLRSERLANLIGCCYE----ADERLLVAEFMPNETLA 73 (424)
Q Consensus 2 G~~g~v~~~~~~~~~v~~~~~~~~~~~----~~~~~~E~~~l~~l~h~~iv~~~~~~~~----~~~~~lv~e~~~~gsL~ 73 (424)
||+|.||++.+.+..|++|++...... .+.|.+|+.+|++++||||++++|++.+ ....++||||+++|+|.
T Consensus 31 g~~~~v~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~g~~~~~~~~~~~~~lv~Ey~~~g~L~ 110 (283)
T PHA02988 31 NDQNSIYKGIFNNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSNNILKIYGFIIDIVDDLPRLSLILEYCTRGYLR 110 (283)
T ss_pred CCceEEEEEEECCEEEEEEeccccccccHHHHHHHHHHHHHHHhcCCCCEEEEeeeEEecccCCCceEEEEEeCCCCcHH
Confidence 889999999999999999988654433 4677899999999999999999999977 34678999999999999
Q ss_pred hHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhC-CCcccccCCCCCeeecCCCCeEEccccccccCCCC-CccccCccCC
Q 014478 74 KHLFHWETQPMKWAMRLRVALYLAQALEYCSSK-GRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG-KSYSTNLAFT 151 (424)
Q Consensus 74 ~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~-~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~-~~~~gt~~y~ 151 (424)
+++.. ...+++...++++.|++.||.|||+. + ++||||||+|||++.++.+||+|||+++..... ....++..|+
T Consensus 111 ~~l~~--~~~~~~~~~~~i~~~i~~~l~~lH~~~~-~~Hrdlkp~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~y~ 187 (283)
T PHA02988 111 EVLDK--EKDLSFKTKLDMAIDCCKGLYNLYKYTN-KPYKNLTSVSFLVTENYKLKIICHGLEKILSSPPFKNVNFMVYF 187 (283)
T ss_pred HHHhh--CCCCChhHHHHHHHHHHHHHHHHHhcCC-CCCCcCChhhEEECCCCcEEEcccchHhhhccccccccCccccc
Confidence 99965 45789999999999999999999985 7 899999999999999999999999998865433 3456889999
Q ss_pred Ccccccc--CCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHHHHHHHHHhcccCc
Q 014478 152 PPEYMRT--GRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEA 229 (424)
Q Consensus 152 aPE~~~~--~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp 229 (424)
|||.+.+ ..++.++|||||||++|||++|+.||....... ..............+..+++++.+++.+||+.||
T Consensus 188 aPE~~~~~~~~~~~k~Di~SlGvil~el~~g~~Pf~~~~~~~----~~~~i~~~~~~~~~~~~~~~~l~~li~~cl~~dp 263 (283)
T PHA02988 188 SYKMLNDIFSEYTIKDDIYSLGVVLWEIFTGKIPFENLTTKE----IYDLIINKNNSLKLPLDCPLEIKCIVEACTSHDS 263 (283)
T ss_pred CHHHhhhccccccchhhhhHHHHHHHHHHHCCCCCCCCCHHH----HHHHHHhcCCCCCCCCcCcHHHHHHHHHHhcCCc
Confidence 9999976 678999999999999999999998887542211 1112222233334555678899999999999999
Q ss_pred CCCCCHHHHHHHHHHHhh
Q 014478 230 RERPNAKSLVISLMSLQK 247 (424)
Q Consensus 230 ~~Rps~~~~~~~l~~~~~ 247 (424)
++|||+.+++..|+.+..
T Consensus 264 ~~Rps~~ell~~l~~~~~ 281 (283)
T PHA02988 264 IKRPNIKEILYNLSLYKF 281 (283)
T ss_pred ccCcCHHHHHHHHHHHHh
Confidence 999999999999988753
|
|
| >KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
Probab=100.00 E-value=9e-45 Score=354.05 Aligned_cols=242 Identities=23% Similarity=0.316 Sum_probs=210.1
Q ss_pred CCCCcccceeeeec-------ceecccccCCCc--hhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCC
Q 014478 1 MGGRCSKFSICWFH-------CHLKSSVLESSD--LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNET 71 (424)
Q Consensus 1 ~G~~g~v~~~~~~~-------~~v~~~~~~~~~--~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gs 71 (424)
+|.||.||.+...+ .-|+||.++... ..+.+|.+|+++|..|+|||||+++|+|..++..+||+|||..|+
T Consensus 496 egaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a~~~~~~dF~REaeLla~l~H~nIVrLlGVC~~~~P~~MvFEYm~~GD 575 (774)
T KOG1026|consen 496 EGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKAENQARQDFRREAELLAELQHPNIVRLLGVCREGDPLCMVFEYMDHGD 575 (774)
T ss_pred CchhhhhhhhhccCCCCCccceehhHhhhcccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEccCCeeEEEEEeccccc
Confidence 58999999997633 337888776444 357899999999999999999999999999999999999999999
Q ss_pred HHhHhccC--------CCC----CCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCC
Q 014478 72 LAKHLFHW--------ETQ----PMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSR 139 (424)
Q Consensus 72 L~~~l~~~--------~~~----~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~ 139 (424)
|.++|... .+. +++..+.+.|+.|||.||.||-++. +|||||-.+|+|++++..|||+|||+++.+-
T Consensus 576 L~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~~~-FVHRDLATRNCLVge~l~VKIsDfGLsRdiY 654 (774)
T KOG1026|consen 576 LHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSSHH-FVHRDLATRNCLVGENLVVKISDFGLSRDIY 654 (774)
T ss_pred HHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCc-ccccchhhhhceeccceEEEecccccchhhh
Confidence 99999633 122 3889999999999999999999999 9999999999999999999999999999876
Q ss_pred CCCc------cccCccCCCccccccCCCCCCcceehhHHHHHHHhh-CCCCCCchhhHHHhhhhhhHhhhcccCCCCCch
Q 014478 140 DGKS------YSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKNFLLLMDSALEGHFSND 212 (424)
Q Consensus 140 ~~~~------~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 212 (424)
.... ..-.+.|||||.|..+++|.+||||||||+|||+++ |+.|+.+ ..++.+.+.+........|.+
T Consensus 655 ssDYYk~~~~t~lPIRWMppEsIly~kFTteSDVWs~GVvLWEIFsyG~QPy~g-----lSn~EVIe~i~~g~lL~~Pe~ 729 (774)
T KOG1026|consen 655 SSDYYKVRGNTLLPIRWMPPESILYGKFTTESDVWSFGVVLWEIFSYGKQPYYG-----LSNQEVIECIRAGQLLSCPEN 729 (774)
T ss_pred hhhhhcccCCceeeeecCCHHHhhcCcccchhhhhhhhhhhhhhhccccCcccc-----cchHHHHHHHHcCCcccCCCC
Confidence 4432 223589999999999999999999999999999998 5556555 456666777766666788999
Q ss_pred hHHHHHHHHHHhcccCcCCCCCHHHHHHHHHHHhhh
Q 014478 213 EGTELVRLASRCLQSEARERPNAKSLVISLMSLQKE 248 (424)
Q Consensus 213 ~~~~l~~li~~cl~~dp~~Rps~~~~~~~l~~~~~~ 248 (424)
||.++.+|+..||+.+|++|||++||...|+.....
T Consensus 730 CP~~vY~LM~~CW~~~P~~RPsF~eI~~~L~~~~~~ 765 (774)
T KOG1026|consen 730 CPTEVYSLMLECWNENPKRRPSFKEIHSRLQAWAQA 765 (774)
T ss_pred CCHHHHHHHHHHhhcCcccCCCHHHHHHHHHHHHhc
Confidence 999999999999999999999999999999987664
|
|
| >KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-44 Score=335.86 Aligned_cols=232 Identities=19% Similarity=0.287 Sum_probs=202.0
Q ss_pred CCCcccceeeeecceecccccCCCchhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHhHhccCCC
Q 014478 2 GGRCSKFSICWFHCHLKSSVLESSDLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWET 81 (424)
Q Consensus 2 G~~g~v~~~~~~~~~v~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~ 81 (424)
|+.|.||.+...+..|++|++..- -.-+|+-|++|+||||+.|.|+|....-.|||||||..|-|..+|+. +
T Consensus 135 GaQGAVF~Grl~netVAVKKV~el------kETdIKHLRkLkH~NII~FkGVCtqsPcyCIiMEfCa~GqL~~VLka--~ 206 (904)
T KOG4721|consen 135 GAQGAVFLGRLHNETVAVKKVREL------KETDIKHLRKLKHPNIITFKGVCTQSPCYCIIMEFCAQGQLYEVLKA--G 206 (904)
T ss_pred CcccceeeeeccCceehhHHHhhh------hhhhHHHHHhccCcceeeEeeeecCCceeEEeeeccccccHHHHHhc--c
Confidence 788999999999999999875322 23478999999999999999999999889999999999999999974 7
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCC---CccccCccCCCcccccc
Q 014478 82 QPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG---KSYSTNLAFTPPEYMRT 158 (424)
Q Consensus 82 ~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~---~~~~gt~~y~aPE~~~~ 158 (424)
++++....+.|..+|+.|+.|||.+. |||||||.-||||+.+..|||+|||-++..... -++.||..|||||++..
T Consensus 207 ~~itp~llv~Wsk~IA~GM~YLH~hK-IIHRDLKSPNiLIs~~d~VKIsDFGTS~e~~~~STkMSFaGTVaWMAPEvIrn 285 (904)
T KOG4721|consen 207 RPITPSLLVDWSKGIAGGMNYLHLHK-IIHRDLKSPNILISYDDVVKISDFGTSKELSDKSTKMSFAGTVAWMAPEVIRN 285 (904)
T ss_pred CccCHHHHHHHHHHhhhhhHHHHHhh-HhhhccCCCceEeeccceEEeccccchHhhhhhhhhhhhhhhHhhhCHHHhhc
Confidence 88999999999999999999999998 999999999999999999999999998876543 35689999999999999
Q ss_pred CCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhh-HhhhcccCCCCCchhHHHHHHHHHHhcccCcCCCCCHHH
Q 014478 159 GRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFL-LLMDSALEGHFSNDEGTELVRLASRCLQSEARERPNAKS 237 (424)
Q Consensus 159 ~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~ 237 (424)
.+++.|.||||||||||||+||..|+..- ....++ .+-...+....|..||..+.-|++.||...|.+|||+++
T Consensus 286 ePcsEKVDIwSfGVVLWEmLT~EiPYkdV-----dssAIIwGVGsNsL~LpvPstcP~GfklL~Kqcw~sKpRNRPSFrq 360 (904)
T KOG4721|consen 286 EPCSEKVDIWSFGVVLWEMLTGEIPYKDV-----DSSAIIWGVGSNSLHLPVPSTCPDGFKLLLKQCWNSKPRNRPSFRQ 360 (904)
T ss_pred CCcccccceehhHHHHHHHHhcCCCcccc-----chheeEEeccCCcccccCcccCchHHHHHHHHHHhcCCCCCccHHH
Confidence 99999999999999999999999876542 222222 222344555678889999999999999999999999999
Q ss_pred HHHHHHHHhh
Q 014478 238 LVISLMSLQK 247 (424)
Q Consensus 238 ~~~~l~~~~~ 247 (424)
++.||.....
T Consensus 361 il~HldIa~p 370 (904)
T KOG4721|consen 361 ILLHLDIASP 370 (904)
T ss_pred HHHHHhhcCH
Confidence 9999876543
|
|
| >KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-43 Score=327.99 Aligned_cols=232 Identities=19% Similarity=0.246 Sum_probs=199.7
Q ss_pred CCCcccceeee--ecceecccccCCCch----hhhHHHHHHHHHhcC-CCcCcceeEEEEEeCCeeeEEEecCCCCCHHh
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESSDL----GETLNLEEAKAVGNL-RSERLANLIGCCYEADERLLVAEFMPNETLAK 74 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~~~----~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~ 74 (424)
|++.+||.+.. .+..+|+|++.+... ..+....|-.+|.+| .||.|++++--|.+...+|+|+||+++|+|.+
T Consensus 84 GSYStV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~TFQD~~sLYFvLe~A~nGdll~ 163 (604)
T KOG0592|consen 84 GSYSTVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFTFQDEESLYFVLEYAPNGDLLD 163 (604)
T ss_pred ccceeEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEEeecccceEEEEEecCCCcHHH
Confidence 88999999887 667788888866543 345667799999999 89999999999999999999999999999999
Q ss_pred HhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCC-------------
Q 014478 75 HLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG------------- 141 (424)
Q Consensus 75 ~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~------------- 141 (424)
+|.+ -+.|++.....++.+|+.||+|||++| ||||||||+|||+|+||+++|+|||.++.....
T Consensus 164 ~i~K--~Gsfde~caR~YAAeIldAleylH~~G-IIHRDlKPENILLd~dmhikITDFGsAK~l~~~~~~~~~~~~~~~a 240 (604)
T KOG0592|consen 164 LIKK--YGSFDETCARFYAAEILDALEYLHSNG-IIHRDLKPENILLDKDGHIKITDFGSAKILSPSQKSQENPVDPNQA 240 (604)
T ss_pred HHHH--hCcchHHHHHHHHHHHHHHHHHHHhcC-ceeccCChhheeEcCCCcEEEeeccccccCChhhccccCccCcccc
Confidence 9976 578999999999999999999999999 999999999999999999999999998865421
Q ss_pred ----CccccCccCCCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHHH
Q 014478 142 ----KSYSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTEL 217 (424)
Q Consensus 142 ----~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 217 (424)
.+++||..|.+||++..+..+..+|+|+|||++|+|+.|.+||..... ...+..++. +.-.+|+..++..
T Consensus 241 ~s~~~SFVGTAeYVSPElL~~~~~~~~sDiWAlGCilyQmlaG~PPFra~Ne----yliFqkI~~--l~y~fp~~fp~~a 314 (604)
T KOG0592|consen 241 SSRRSSFVGTAEYVSPELLNDSPAGPSSDLWALGCILYQMLAGQPPFRAANE----YLIFQKIQA--LDYEFPEGFPEDA 314 (604)
T ss_pred cCcccceeeeecccCHHHhcCCCCCcccchHHHHHHHHHHhcCCCCCccccH----HHHHHHHHH--hcccCCCCCCHHH
Confidence 347899999999999999999999999999999999999988876522 122222222 2234677778899
Q ss_pred HHHHHHhcccCcCCCCCHHHHHHHH
Q 014478 218 VRLASRCLQSEARERPNAKSLVISL 242 (424)
Q Consensus 218 ~~li~~cl~~dp~~Rps~~~~~~~l 242 (424)
.+||++.|..||.+|+++.+|.+|.
T Consensus 315 ~dLv~KLLv~dp~~Rlt~~qIk~Hp 339 (604)
T KOG0592|consen 315 RDLIKKLLVRDPSDRLTSQQIKAHP 339 (604)
T ss_pred HHHHHHHHccCccccccHHHHhhCc
Confidence 9999999999999999999998873
|
|
| >cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6e-43 Score=331.88 Aligned_cols=243 Identities=21% Similarity=0.343 Sum_probs=194.1
Q ss_pred CCCCcccceeeee-------cceecccccCCCc--hhhhHHHHHHHHHhcC-CCcCcceeEEEEEeCC-eeeEEEecCCC
Q 014478 1 MGGRCSKFSICWF-------HCHLKSSVLESSD--LGETLNLEEAKAVGNL-RSERLANLIGCCYEAD-ERLLVAEFMPN 69 (424)
Q Consensus 1 ~G~~g~v~~~~~~-------~~~v~~~~~~~~~--~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~-~~~lv~e~~~~ 69 (424)
-||||.||.+.+. +..|++|++.... .....+.+|+.++..+ +||||++++++|...+ ..++||||+++
T Consensus 17 ~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~~lv~ey~~~ 96 (338)
T cd05102 17 HGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGATASEHKALMSELKILIHIGNHLNVVNLLGACTKPNGPLMVIVEFCKY 96 (338)
T ss_pred cCCcceEEEEEEeccCCcccchhhheeccccccchHHHHHHHHHHHHHHHhccCcceeeEEeEecCCCCceEEEEecCCC
Confidence 3899999999753 2457777775432 3346788999999999 8999999999987644 57899999999
Q ss_pred CCHHhHhccCC------------------------------------------------------------CCCCCHHHH
Q 014478 70 ETLAKHLFHWE------------------------------------------------------------TQPMKWAMR 89 (424)
Q Consensus 70 gsL~~~l~~~~------------------------------------------------------------~~~l~~~~~ 89 (424)
|+|.+++.... ..++++.++
T Consensus 97 g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 176 (338)
T cd05102 97 GNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSGSTNPPQETDDLWKSPLTMEDL 176 (338)
T ss_pred CcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccCcccccchhccccccCCCCHHHH
Confidence 99999986421 135788899
Q ss_pred HHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCC------CccccCccCCCccccccCCCCC
Q 014478 90 LRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG------KSYSTNLAFTPPEYMRTGRVTP 163 (424)
Q Consensus 90 ~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~------~~~~gt~~y~aPE~~~~~~~~~ 163 (424)
..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++..... ....++..|+|||++.+..++.
T Consensus 177 ~~~~~qi~~aL~~LH~~~-ivHrDiKp~Nil~~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~ 255 (338)
T cd05102 177 ICYSFQVARGMEFLASRK-CIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGSARLPLKWMAPESIFDKVYTT 255 (338)
T ss_pred HHHHHHHHHHHHHHHHCC-EECCCCccceEEEcCCCcEEEeecccccccccCcchhcccCCCCCccccCcHHhhcCCCCc
Confidence 999999999999999999 999999999999999999999999999865322 1234567899999999888999
Q ss_pred CcceehhHHHHHHHhh-CCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHHHHHHHHHhcccCcCCCCCHHHHHHHH
Q 014478 164 ESVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERPNAKSLVISL 242 (424)
Q Consensus 164 ~~Dv~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~~~~~l 242 (424)
++|||||||++|||++ |..||+..... ...............+..+++++.+++.+||..||++|||+.++++.|
T Consensus 256 ~sDiwslG~il~el~~~g~~pf~~~~~~----~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~el~~~l 331 (338)
T cd05102 256 QSDVWSFGVLLWEIFSLGASPYPGVQIN----EEFCQRLKDGTRMRAPENATPEIYRIMLACWQGDPKERPTFSALVEIL 331 (338)
T ss_pred ccCHHHHHHHHHHHHhCCCCCCCCCCcc----HHHHHHHhcCCCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHH
Confidence 9999999999999997 88787653211 111122222222334556788999999999999999999999999999
Q ss_pred HHHhhh
Q 014478 243 MSLQKE 248 (424)
Q Consensus 243 ~~~~~~ 248 (424)
+.+..+
T Consensus 332 ~~~~~~ 337 (338)
T cd05102 332 GDLLQE 337 (338)
T ss_pred HHHHhc
Confidence 987653
|
Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V |
| >KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-44 Score=327.61 Aligned_cols=237 Identities=17% Similarity=0.201 Sum_probs=195.0
Q ss_pred CCCcccceeee--ecceecccccCCCchhhhHH--HHHHHHHhcCC-CcCcceeEEEEEeCC-eeeEEEecCCCCCHHhH
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESSDLGETLN--LEEAKAVGNLR-SERLANLIGCCYEAD-ERLLVAEFMPNETLAKH 75 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~~~~~~~~--~~E~~~l~~l~-h~~iv~~~~~~~~~~-~~~lv~e~~~~gsL~~~ 75 (424)
|.||.||.+.- .+..||+|.++..-...++. +||++.|++|+ ||||+++..++.+.+ .+++|||||+. +|.++
T Consensus 21 GTfGsV~la~~~~~~~~VAIK~MK~Kf~s~ee~~nLREvksL~kln~hpniikL~Evi~d~~~~L~fVfE~Md~-NLYqL 99 (538)
T KOG0661|consen 21 GTFGSVYLAKSKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNPHPNIIKLKEVIRDNDRILYFVFEFMDC-NLYQL 99 (538)
T ss_pred CcceeEEEeeecCCCceeeHHHHHhhhccHHHHHHHHHHHHHHhcCCCCcchhhHHHhhccCceEeeeHHhhhh-hHHHH
Confidence 88999999976 67889999887665544433 57999999998 999999999999887 89999999977 99999
Q ss_pred hccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCC---CccccCccCCC
Q 014478 76 LFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG---KSYSTNLAFTP 152 (424)
Q Consensus 76 l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~---~~~~gt~~y~a 152 (424)
++++ +..|++..+..|+.||+.||+|+|.+| +.|||+||+|||+..+..+||+|||+||.+... +....|..|.|
T Consensus 100 mK~R-~r~fse~~irnim~QilqGL~hiHk~G-fFHRDlKPENiLi~~~~~iKiaDFGLARev~SkpPYTeYVSTRWYRA 177 (538)
T KOG0661|consen 100 MKDR-NRLFSESDIRNIMYQILQGLAHIHKHG-FFHRDLKPENILISGNDVIKIADFGLAREVRSKPPYTEYVSTRWYRA 177 (538)
T ss_pred Hhhc-CCcCCHHHHHHHHHHHHHHHHHHHhcC-cccccCChhheEecccceeEecccccccccccCCCcchhhhcccccc
Confidence 9875 889999999999999999999999999 999999999999999999999999999987644 56678999999
Q ss_pred cccccc-CCCCCCcceehhHHHHHHHhhCCCCCCchhhH--HHhh---------------hhhhHhhhcccCC-------
Q 014478 153 PEYMRT-GRVTPESVVYSFGTMLLDLLSGKHIPPSHALD--LIRS---------------KNFLLLMDSALEG------- 207 (424)
Q Consensus 153 PE~~~~-~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~--~~~~---------------~~~~~~~~~~~~~------- 207 (424)
||++.. +-|+.+.|+|++||+++|+.+-++.||+...- .+.. ......+.-..+.
T Consensus 178 PEvLLrs~~Ys~pvD~wA~GcI~aEl~sLrPLFPG~sE~Dqi~KIc~VLGtP~~~~~~eg~~La~~mnf~~P~~~~~~l~ 257 (538)
T KOG0661|consen 178 PEVLLRSGYYSSPVDMWAVGCIMAELYSLRPLFPGASEIDQIYKICEVLGTPDKDSWPEGYNLASAMNFRFPQVKPSPLK 257 (538)
T ss_pred hHHhhhccccCCchHHHHHHHHHHHHHHhcccCCCCcHHHHHHHHHHHhCCCccccchhHHHHHHHhccCCCcCCCCChH
Confidence 998874 56899999999999999999999999975211 1100 0000001000000
Q ss_pred CCCchhHHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 014478 208 HFSNDEGTELVRLASRCLQSEARERPNAKSLVIS 241 (424)
Q Consensus 208 ~~~~~~~~~l~~li~~cl~~dp~~Rps~~~~~~~ 241 (424)
..-+.++.++.++|.+||.+||++|||+++.+++
T Consensus 258 ~L~p~~s~~~~~li~~ll~WDP~kRpTA~~al~~ 291 (538)
T KOG0661|consen 258 DLLPNASSEAASLIERLLAWDPDKRPTASQALQH 291 (538)
T ss_pred HhCcccCHHHHHHHHHHhcCCCccCccHHHHhcC
Confidence 1112368899999999999999999999999986
|
|
| >KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-43 Score=319.35 Aligned_cols=236 Identities=17% Similarity=0.233 Sum_probs=193.9
Q ss_pred CCCCcccceeee--ecceecccccC--CCchhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHhHh
Q 014478 1 MGGRCSKFSICW--FHCHLKSSVLE--SSDLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHL 76 (424)
Q Consensus 1 ~G~~g~v~~~~~--~~~~v~~~~~~--~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~l 76 (424)
+|..+.||.+.+ .+..|++|++. ......+.+.+|+..|+.++||||+.++-.|..++.+|+||.||.+||+.+++
T Consensus 36 ~G~sa~V~~A~c~p~~e~VAIK~inLEkc~~~ld~l~kE~~~msl~~HPNIv~~~~sFvv~~~LWvVmpfMa~GS~ldIi 115 (516)
T KOG0582|consen 36 VGASAVVYLARCIPTNEVVAIKIINLEKCNNDLDALRKEVQTMSLIDHPNIVTYHCSFVVDSELWVVMPFMAGGSLLDII 115 (516)
T ss_pred ccceeEeeeeeecccCCEEEEEEeehhhhhhhHHHHHHHHHHhhhcCCCCcceEEEEEEecceeEEeehhhcCCcHHHHH
Confidence 577788999987 67888988884 34445678899999999999999999999999999999999999999999999
Q ss_pred ccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCC--------CccccCc
Q 014478 77 FHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG--------KSYSTNL 148 (424)
Q Consensus 77 ~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~--------~~~~gt~ 148 (424)
+..-..++++..+..|++++++||.|||.+| .||||||+.||||+.+|.|||+|||.+.....+ ..+.||+
T Consensus 116 k~~~~~Gl~E~~Ia~iLre~LkaL~YLH~~G-~IHRdvKAgnILi~~dG~VkLadFgvsa~l~~~G~R~~~rf~tfvgtp 194 (516)
T KOG0582|consen 116 KTYYPDGLEEASIATILREVLKALDYLHQNG-HIHRDVKAGNILIDSDGTVKLADFGVSASLFDSGDRQVTRFNTFVGTP 194 (516)
T ss_pred HHHccccccHHHHHHHHHHHHHHHHHHHhcC-ceecccccccEEEcCCCcEEEcCceeeeeecccCceeeEeeccccCcc
Confidence 8766667999999999999999999999999 999999999999999999999999976543321 3457899
Q ss_pred cCCCcccccc--CCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhcccC--------CCCCchhHHHHH
Q 014478 149 AFTPPEYMRT--GRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALE--------GHFSNDEGTELV 218 (424)
Q Consensus 149 ~y~aPE~~~~--~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~l~ 218 (424)
.|||||++.. ..|+.|+|||||||+..||.+|..||..... .+....-+...++ .......+..++
T Consensus 195 ~wmAPEvl~q~~~GYdfKaDIwSfGITA~ELA~G~aPf~k~pP----mkvLl~tLqn~pp~~~t~~~~~d~~k~~~ksf~ 270 (516)
T KOG0582|consen 195 CWMAPEVLMQQLHGYDFKADIWSFGITACELAHGHAPFSKYPP----MKVLLLTLQNDPPTLLTSGLDKDEDKKFSKSFR 270 (516)
T ss_pred cccChHHhhhcccCccchhhhhhhhHHHHHHhcCCCCcccCCh----HHHHHHHhcCCCCCcccccCChHHhhhhcHHHH
Confidence 9999999653 4699999999999999999999988765311 1111111111111 111123566899
Q ss_pred HHHHHhcccCcCCCCCHHHHHHH
Q 014478 219 RLASRCLQSEARERPNAKSLVIS 241 (424)
Q Consensus 219 ~li~~cl~~dp~~Rps~~~~~~~ 241 (424)
++|..||++||.+|||+++++.+
T Consensus 271 e~i~~CL~kDP~kRptAskLlkh 293 (516)
T KOG0582|consen 271 EMIALCLVKDPSKRPTASKLLKH 293 (516)
T ss_pred HHHHHHhhcCcccCCCHHHHhcc
Confidence 99999999999999999999975
|
|
| >KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.9e-43 Score=328.55 Aligned_cols=231 Identities=19% Similarity=0.222 Sum_probs=195.0
Q ss_pred CCCcccceeee--ecceecccccCCC----c--hhhhHHHHHHHHHhcCC-CcCcceeEEEEEeCCeeeEEEecCCCCCH
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESS----D--LGETLNLEEAKAVGNLR-SERLANLIGCCYEADERLLVAEFMPNETL 72 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~----~--~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~~lv~e~~~~gsL 72 (424)
|+||.|+.+.. .+..|++|++... . ...+.+.+|+.+++.++ ||||++++.++......++||||+.||+|
T Consensus 28 GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~t~~~~~ivmEy~~gGdL 107 (370)
T KOG0583|consen 28 GSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFATPTKIYIVMEYCSGGDL 107 (370)
T ss_pred CCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEecCCeEEEEEEecCCccH
Confidence 88999999987 5678888866543 1 22445668999999998 99999999999999999999999999999
Q ss_pred HhHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCC-CCeEEccccccccCC----CCCccccC
Q 014478 73 AKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKD-GNPRLSSFGLMKNSR----DGKSYSTN 147 (424)
Q Consensus 73 ~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~-~~~kl~Dfg~~~~~~----~~~~~~gt 147 (424)
.+++.+ .+++.+.++.++++|+++|++|||++| |+||||||+|||++.+ +++||+|||++.... .....+||
T Consensus 108 ~~~i~~--~g~l~E~~ar~~F~Qlisav~y~H~~g-i~HRDLK~ENilld~~~~~~Kl~DFG~s~~~~~~~~~l~t~cGs 184 (370)
T KOG0583|consen 108 FDYIVN--KGRLKEDEARKYFRQLISAVAYCHSRG-IVHRDLKPENILLDGNEGNLKLSDFGLSAISPGEDGLLKTFCGS 184 (370)
T ss_pred HHHHHH--cCCCChHHHHHHHHHHHHHHHHHHhCC-EeeCCCCHHHEEecCCCCCEEEeccccccccCCCCCcccCCCCC
Confidence 999975 678999999999999999999999999 9999999999999999 999999999998772 23567899
Q ss_pred ccCCCccccccCC-CC-CCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhcccCCCCCchh-HHHHHHHHHHh
Q 014478 148 LAFTPPEYMRTGR-VT-PESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDE-GTELVRLASRC 224 (424)
Q Consensus 148 ~~y~aPE~~~~~~-~~-~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~li~~c 224 (424)
+.|+|||++.+.. |+ .++||||+||+||-|++|..||.......+-. .+.. ..-.+|..+ ++++..++.+|
T Consensus 185 p~Y~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml~G~~PF~d~~~~~l~~----ki~~--~~~~~p~~~~S~~~~~Li~~m 258 (370)
T KOG0583|consen 185 PAYAAPEVLSGKGTYSGKAADVWSLGVILYVLLCGRLPFDDSNVPNLYR----KIRK--GEFKIPSYLLSPEARSLIEKM 258 (370)
T ss_pred cccCCHHHhCCCCCcCCchhhhhhhHHHHHHHHhCCCCCCCccHHHHHH----HHhc--CCccCCCCcCCHHHHHHHHHH
Confidence 9999999999877 85 68999999999999999999988632111111 1111 122345555 89999999999
Q ss_pred cccCcCCCCCHHHHHHH
Q 014478 225 LQSEARERPNAKSLVIS 241 (424)
Q Consensus 225 l~~dp~~Rps~~~~~~~ 241 (424)
|..||.+|+|+.+++.+
T Consensus 259 L~~~P~~R~t~~~i~~h 275 (370)
T KOG0583|consen 259 LVPDPSTRITLLEILEH 275 (370)
T ss_pred cCCCcccCCCHHHHhhC
Confidence 99999999999999954
|
|
| >KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.3e-43 Score=330.66 Aligned_cols=243 Identities=20% Similarity=0.287 Sum_probs=206.4
Q ss_pred CCCcccceeeeec-----ce-ecccccCC----CchhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCC
Q 014478 2 GGRCSKFSICWFH-----CH-LKSSVLES----SDLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNET 71 (424)
Q Consensus 2 G~~g~v~~~~~~~-----~~-v~~~~~~~----~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gs 71 (424)
|.||.||.+.+.. .. ||++.... .......|++|+++|++++|||||++||++.....++||||+|.||+
T Consensus 168 GaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~H~NVVr~yGVa~~~~Pl~ivmEl~~gGs 247 (474)
T KOG0194|consen 168 GAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLNHPNVVRFYGVAVLEEPLMLVMELCNGGS 247 (474)
T ss_pred ccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCccEEEEEecCCCc
Confidence 8999999998732 12 56666653 23557899999999999999999999999999999999999999999
Q ss_pred HHhHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCCC----ccccC
Q 014478 72 LAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGK----SYSTN 147 (424)
Q Consensus 72 L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~~----~~~gt 147 (424)
|.++|++. +..++..+.++++.+.++||+|||+++ +|||||-.+|||++.++.+||+|||+++...... ...-.
T Consensus 248 L~~~L~k~-~~~v~~~ek~~~~~~AA~Gl~YLh~k~-~IHRDIAARNcL~~~~~~vKISDFGLs~~~~~~~~~~~~~klP 325 (474)
T KOG0194|consen 248 LDDYLKKN-KKSLPTLEKLRFCYDAARGLEYLHSKN-CIHRDIAARNCLYSKKGVVKISDFGLSRAGSQYVMKKFLKKLP 325 (474)
T ss_pred HHHHHHhC-CCCCCHHHHHHHHHHHHhHHHHHHHCC-CcchhHhHHHheecCCCeEEeCccccccCCcceeeccccccCc
Confidence 99999873 346999999999999999999999999 9999999999999999999999999988765221 12346
Q ss_pred ccCCCccccccCCCCCCcceehhHHHHHHHhh-CCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHHHHHHHHHhcc
Q 014478 148 LAFTPPEYMRTGRVTPESVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQ 226 (424)
Q Consensus 148 ~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~ 226 (424)
..|+|||.+..+.++.++|||||||++||+++ |..|+++.... .....+.....+...|...|.++..++.+||.
T Consensus 326 irWLAPEtl~~~~~s~kTDV~sfGV~~~Eif~~g~~Py~g~~~~----~v~~kI~~~~~r~~~~~~~p~~~~~~~~~c~~ 401 (474)
T KOG0194|consen 326 IRWLAPETLNTGIFSFKTDVWSFGVLLWEIFENGAEPYPGMKNY----EVKAKIVKNGYRMPIPSKTPKELAKVMKQCWK 401 (474)
T ss_pred ceecChhhhccCccccccchhheeeeEEeeeccCCCCCCCCCHH----HHHHHHHhcCccCCCCCCCHHHHHHHHHHhcc
Confidence 88999999999999999999999999999998 67777764222 22223335566777788889999999999999
Q ss_pred cCcCCCCCHHHHHHHHHHHhhhhh
Q 014478 227 SEARERPNAKSLVISLMSLQKEAE 250 (424)
Q Consensus 227 ~dp~~Rps~~~~~~~l~~~~~~~~ 250 (424)
.||++||||.++.+.++.+.....
T Consensus 402 ~~p~~R~tm~~i~~~l~~~~~~~~ 425 (474)
T KOG0194|consen 402 KDPEDRPTMSTIKKKLEALEKKKE 425 (474)
T ss_pred CChhhccCHHHHHHHHHHHHhccc
Confidence 999999999999999998887644
|
|
| >KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-44 Score=326.26 Aligned_cols=232 Identities=15% Similarity=0.243 Sum_probs=200.7
Q ss_pred CCCcccceeee--ecceecccccC--CCchhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHhHhc
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLE--SSDLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLF 77 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~--~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~ 77 (424)
|+||.||++.+ ....|++|++. ......+.+.+|+.+|.+++++||.++||.+..+..++++||||.||++.+.+.
T Consensus 24 GsfG~Vyk~~d~~t~k~vAiKii~Le~~~deIediqqei~~Ls~~~~~~it~yygsyl~g~~LwiiMey~~gGsv~~lL~ 103 (467)
T KOG0201|consen 24 GSFGEVYKAIDNKTKKVVAIKIIDLEEAEDEIEDIQQEISVLSQCDSPNITEYYGSYLKGTKLWIIMEYCGGGSVLDLLK 103 (467)
T ss_pred cccceeeeeeeccccceEEEEEechhhcchhhHHHHHHHHHHHhcCcchHHhhhhheeecccHHHHHHHhcCcchhhhhc
Confidence 89999999988 66778888774 444557788999999999999999999999999999999999999999999996
Q ss_pred cCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCC----CccccCccCCCc
Q 014478 78 HWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG----KSYSTNLAFTPP 153 (424)
Q Consensus 78 ~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~----~~~~gt~~y~aP 153 (424)
. +..+++..+.-++++++.||.|||.++ .+|||||+.|||+..+|.+||+|||.+...... ..+.||+.||||
T Consensus 104 ~--~~~~~E~~i~~ilre~l~~l~ylH~~~-kiHrDIKaanil~s~~g~vkl~DfgVa~ql~~~~~rr~tfvGTPfwMAP 180 (467)
T KOG0201|consen 104 S--GNILDEFEIAVILREVLKGLDYLHSEK-KIHRDIKAANILLSESGDVKLADFGVAGQLTNTVKRRKTFVGTPFWMAP 180 (467)
T ss_pred c--CCCCccceeeeehHHHHHHhhhhhhcc-eecccccccceeEeccCcEEEEecceeeeeechhhccccccccccccch
Confidence 4 445588899999999999999999999 999999999999999999999999998766533 567899999999
Q ss_pred cccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHHHHHHHHHhcccCcCCCC
Q 014478 154 EYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERP 233 (424)
Q Consensus 154 E~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rp 233 (424)
|++....|+.++||||||++.+||.+|.+|+... ....+..++....++.....+++.+++|+..||.+||+.||
T Consensus 181 EVI~~~~Y~~KADIWSLGITaiEla~GePP~s~~-----hPmrvlflIpk~~PP~L~~~~S~~~kEFV~~CL~k~P~~Rp 255 (467)
T KOG0201|consen 181 EVIKQSGYDTKADIWSLGITAIELAKGEPPHSKL-----HPMRVLFLIPKSAPPRLDGDFSPPFKEFVEACLDKNPEFRP 255 (467)
T ss_pred hhhccccccchhhhhhhhHHHHHHhcCCCCCccc-----CcceEEEeccCCCCCccccccCHHHHHHHHHHhhcCcccCc
Confidence 9999889999999999999999999999776542 22333344444444455557889999999999999999999
Q ss_pred CHHHHHHH
Q 014478 234 NAKSLVIS 241 (424)
Q Consensus 234 s~~~~~~~ 241 (424)
|+.+++++
T Consensus 256 sA~~LLKh 263 (467)
T KOG0201|consen 256 SAKELLKH 263 (467)
T ss_pred CHHHHhhh
Confidence 99999976
|
|
| >KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-43 Score=330.67 Aligned_cols=238 Identities=19% Similarity=0.331 Sum_probs=197.8
Q ss_pred CCCcccceeeeecceecccccCC---CchhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHhHhcc
Q 014478 2 GGRCSKFSICWFHCHLKSSVLES---SDLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFH 78 (424)
Q Consensus 2 G~~g~v~~~~~~~~~v~~~~~~~---~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~ 78 (424)
|+||+||++.|+|. ||||++.- .....+.|.+|+.++++-+|.||+-|.|+|..+.. .||+-||+|.+|..+|+-
T Consensus 403 GsFGtV~Rg~whGd-VAVK~Lnv~~pt~~qlqaFKnEVa~lkkTRH~NIlLFMG~~~~p~~-AIiTqwCeGsSLY~hlHv 480 (678)
T KOG0193|consen 403 GSFGTVYRGRWHGD-VAVKLLNVDDPTPEQLQAFKNEVAVLKKTRHENILLFMGACMNPPL-AIITQWCEGSSLYTHLHV 480 (678)
T ss_pred ccccceeecccccc-eEEEEEecCCCCHHHHHHHHHHHHHHhhcchhhheeeehhhcCCce-eeeehhccCchhhhhccc
Confidence 89999999999986 67777743 34567899999999999999999999999998776 899999999999999964
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCC------CCCccccCccCCC
Q 014478 79 WETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSR------DGKSYSTNLAFTP 152 (424)
Q Consensus 79 ~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~------~~~~~~gt~~y~a 152 (424)
....|+..+.+.|++||+.|+.|||.++ |||||||..|||+.+++.|||+|||++.... +.....|...|||
T Consensus 481 -~etkfdm~~~idIAqQiaqGM~YLHAK~-IIHrDLKSnNIFl~~~~kVkIgDFGLatvk~~w~g~~q~~qp~gsilwmA 558 (678)
T KOG0193|consen 481 -QETKFDMNTTIDIAQQIAQGMDYLHAKN-IIHRDLKSNNIFLHEDLKVKIGDFGLATVKTRWSGEQQLEQPHGSLLWMA 558 (678)
T ss_pred -hhhhhhHHHHHHHHHHHHHhhhhhhhhh-hhhhhccccceEEccCCcEEEecccceeeeeeeccccccCCCccchhhhc
Confidence 3467899999999999999999999999 9999999999999999999999999986433 1123457889999
Q ss_pred cccccc---CCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhccc----CCCCCchhHHHHHHHHHHhc
Q 014478 153 PEYMRT---GRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSAL----EGHFSNDEGTELVRLASRCL 225 (424)
Q Consensus 153 PE~~~~---~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~l~~li~~cl 225 (424)
||++.. .+|++.+||||||||+|||+||..|+.... .. .+...+.... ......+++.++.+|+..||
T Consensus 559 PEvIRmqd~nPfS~qSDVYaFGiV~YELltg~lPysi~~----~d-qIifmVGrG~l~pd~s~~~s~~pk~mk~Ll~~C~ 633 (678)
T KOG0193|consen 559 PEVIRMQDDNPFSFQSDVYAFGIVWYELLTGELPYSIQN----RD-QIIFMVGRGYLMPDLSKIRSNCPKAMKRLLSDCW 633 (678)
T ss_pred HHHHhhcccCCCCcccchhhhhHHHHHHHhCcCCcCCCC----hh-heEEEecccccCccchhhhccCHHHHHHHHHHHH
Confidence 999974 369999999999999999999998876431 11 1222222221 11233467889999999999
Q ss_pred ccCcCCCCCHHHHHHHHHHHhhh
Q 014478 226 QSEARERPNAKSLVISLMSLQKE 248 (424)
Q Consensus 226 ~~dp~~Rps~~~~~~~l~~~~~~ 248 (424)
..++++||.+.+|+..|+.+...
T Consensus 634 ~~~~~eRP~F~~il~~l~~l~~~ 656 (678)
T KOG0193|consen 634 KFDREERPLFPQLLSKLEELLPS 656 (678)
T ss_pred hcCcccCccHHHHHHHHHHhhhc
Confidence 99999999999999988887653
|
|
| >KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-43 Score=338.97 Aligned_cols=295 Identities=18% Similarity=0.246 Sum_probs=246.0
Q ss_pred CCCcccceeee-----ecceecccccCC--CchhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHh
Q 014478 2 GGRCSKFSICW-----FHCHLKSSVLES--SDLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAK 74 (424)
Q Consensus 2 G~~g~v~~~~~-----~~~~v~~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~ 74 (424)
|-||.|+++.. ....|++|-++. .+..+.+|+.|+.+|-+++||||+++-|+........||+|||++|+|..
T Consensus 640 GEFGEVc~GrLk~pgkre~~VAIKTLK~GytekqrrdFL~EAsIMGQFdHPNIIrLEGVVTks~PvMIiTEyMENGsLDs 719 (996)
T KOG0196|consen 640 GEFGEVCSGRLKLPGKREITVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIRLEGVVTKSKPVMIITEYMENGSLDS 719 (996)
T ss_pred ccccceecccccCCCCcceeEEEeeeccCccHHHHhhhhhhhhhcccCCCCcEEEEEEEEecCceeEEEhhhhhCCcHHH
Confidence 77999999976 224477777653 44557899999999999999999999999999999999999999999999
Q ss_pred HhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCCCcc----c-c--C
Q 014478 75 HLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSY----S-T--N 147 (424)
Q Consensus 75 ~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~~~~----~-g--t 147 (424)
+|+.++ +.|++.+...++++|+.|++||-+++ +|||||...|||++.+..+|++|||+++...+.... . | .
T Consensus 720 FLR~~D-GqftviQLVgMLrGIAsGMkYLsdm~-YVHRDLAARNILVNsnLvCKVsDFGLSRvledd~~~~ytt~GGKIP 797 (996)
T KOG0196|consen 720 FLRQND-GQFTVIQLVGMLRGIASGMKYLSDMN-YVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEAAYTTLGGKIP 797 (996)
T ss_pred HHhhcC-CceEeehHHHHHHHHHHHhHHHhhcC-chhhhhhhhheeeccceEEEeccccceeecccCCCccccccCCccc
Confidence 998755 45999999999999999999999999 999999999999999999999999999977544311 1 1 4
Q ss_pred ccCCCccccccCCCCCCcceehhHHHHHHHhh-CCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHHHHHHHHHhcc
Q 014478 148 LAFTPPEYMRTGRVTPESVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQ 226 (424)
Q Consensus 148 ~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~ 226 (424)
+.|.|||.+..++++.+|||||||||+||.++ |..|+.. +.++.+...+...++.+.|.+||..|.+|+..||+
T Consensus 798 iRWTAPEAIa~RKFTsASDVWSyGIVmWEVmSyGERPYWd-----mSNQdVIkaIe~gyRLPpPmDCP~aL~qLMldCWq 872 (996)
T KOG0196|consen 798 IRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWD-----MSNQDVIKAIEQGYRLPPPMDCPAALYQLMLDCWQ 872 (996)
T ss_pred eeecChhHhhhcccCchhhccccceEEEEecccCCCcccc-----cchHHHHHHHHhccCCCCCCCCcHHHHHHHHHHHH
Confidence 78999999999999999999999999999776 5555444 67888888899999999999999999999999999
Q ss_pred cCcCCCCCHHHHHHHHHHHhhhhhcCCchhhhccc-CCC---CCCCCCCCCCcccccccccchhHHHHHHHhccccCCcc
Q 014478 227 SEARERPNAKSLVISLMSLQKEAEQVPSYVLLGIQ-HET---APSTKPLSLTPLGEACSRLDLTAIHEILEGMGYKDDEG 302 (424)
Q Consensus 227 ~dp~~Rps~~~~~~~l~~~~~~~~~~~~~~~~~~~-~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~ 302 (424)
+|-.+||.+.+|+..|.++++.+............ ... .+.+.-.....+.+|...+.+....+.|...|+.+.+.
T Consensus 873 kdR~~RP~F~qiV~~lDklIrnP~SLk~~~~~~~r~s~~lld~~~~~~~~f~sv~~WL~aIkm~rY~~~F~~ag~~s~~~ 952 (996)
T KOG0196|consen 873 KDRNRRPKFAQIVSTLDKLIRNPNSLKTIAPESPRPSQPLLDRSGSDFTPFRSVGDWLEAIKMGRYKEHFAAAGYTSFED 952 (996)
T ss_pred HHhhcCCCHHHHHHHHHHHhcCchhhcccCCCCCCCcccccCCCCCCCcccCCHHHHHHHhhhhHHHHHHHhcCcccHHH
Confidence 99999999999999999998865433221111111 111 12223334667788999999999999999999988775
Q ss_pred h
Q 014478 303 I 303 (424)
Q Consensus 303 ~ 303 (424)
.
T Consensus 953 V 953 (996)
T KOG0196|consen 953 V 953 (996)
T ss_pred H
Confidence 4
|
|
| >KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-43 Score=327.62 Aligned_cols=230 Identities=16% Similarity=0.193 Sum_probs=199.3
Q ss_pred CCCcccceeee--ecceecccccCCCc---hhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHhHh
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESSD---LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHL 76 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~~---~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~l 76 (424)
|+||.||++.. ....|++|.+.+.. ...+.+.+|++++++++||||+.++++|+...++|+|+||+.| +|..++
T Consensus 13 Gsfg~VYKgrrK~t~~~vAik~i~K~gr~~k~l~~l~~ev~i~r~lkHpniv~m~esfEt~~~~~vVte~a~g-~L~~il 91 (808)
T KOG0597|consen 13 GSFGRVYKGRRKYTIQVVAIKFIDKSGRNEKELKNLRQEVRILRSLKHPNIVEMLESFETSAHLWVVTEYAVG-DLFTIL 91 (808)
T ss_pred CccceeeecccccceeEEEEEEehhcCCchHHHHHHHHHHHHHHhcCCcchhhHHHhhcccceEEEEehhhhh-hHHHHH
Confidence 89999999975 66778888775544 3456788999999999999999999999999999999999987 999999
Q ss_pred ccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCCC----ccccCccCCC
Q 014478 77 FHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGK----SYSTNLAFTP 152 (424)
Q Consensus 77 ~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~~----~~~gt~~y~a 152 (424)
.. .+.++++.+..++.+++.||.|||+.+ |+|||+||.|||++.+|.+|+||||+++.....+ +..||+.|||
T Consensus 92 ~~--d~~lpEe~v~~~a~~LVsaL~yLhs~r-ilhrd~kPqniLl~~~~~~KlcdFg~Ar~m~~~t~vltsikGtPlYmA 168 (808)
T KOG0597|consen 92 EQ--DGKLPEEQVRAIAYDLVSALYYLHSNR-ILHRDMKPQNILLEKGGTLKLCDFGLARAMSTNTSVLTSIKGTPLYMA 168 (808)
T ss_pred Hh--ccCCCHHHHHHHHHHHHHHHHHHHhcC-cccccCCcceeeecCCCceeechhhhhhhcccCceeeeeccCcccccC
Confidence 74 678999999999999999999999999 9999999999999999999999999999877653 4579999999
Q ss_pred ccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHHHHHHHHHhcccCcCCC
Q 014478 153 PEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARER 232 (424)
Q Consensus 153 PE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~R 232 (424)
||.+.+++|+..+|+||+||++||+++|++||...+...... .+... ...+|...+..+..|+...|.+||.+|
T Consensus 169 PElv~e~pyd~~sDlWslGcilYE~~~G~PPF~a~si~~Lv~----~I~~d--~v~~p~~~S~~f~nfl~gLL~kdP~~R 242 (808)
T KOG0597|consen 169 PELVEEQPYDHTSDLWSLGCILYELYVGQPPFYARSITQLVK----SILKD--PVKPPSTASSSFVNFLQGLLIKDPAQR 242 (808)
T ss_pred HHHHcCCCccchhhHHHHHHHHHHHhcCCCCchHHHHHHHHH----HHhcC--CCCCcccccHHHHHHHHHHhhcChhhc
Confidence 999999999999999999999999999998887653322211 11111 123455788999999999999999999
Q ss_pred CCHHHHHHH
Q 014478 233 PNAKSLVIS 241 (424)
Q Consensus 233 ps~~~~~~~ 241 (424)
.|..+++.|
T Consensus 243 ltW~~Ll~H 251 (808)
T KOG0597|consen 243 LTWTDLLGH 251 (808)
T ss_pred ccHHHHhcC
Confidence 999999876
|
|
| >KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-43 Score=328.82 Aligned_cols=240 Identities=18% Similarity=0.297 Sum_probs=219.4
Q ss_pred CCCcccceeee--ecceecccccCCCchhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHhHhccC
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESSDLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHW 79 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~ 79 (424)
|-+|.||.++| +...|++|.++.+....++|+.|+.+|+.++|||+|+++|+|.....+|||+|||..|+|.+||...
T Consensus 278 GQYGeVYeGvWKkyslTvAVKtLKEDtMeveEFLkEAAvMKeikHpNLVqLLGVCT~EpPFYIiTEfM~yGNLLdYLRec 357 (1157)
T KOG4278|consen 278 GQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTHEPPFYIITEFMCYGNLLDYLREC 357 (1157)
T ss_pred CcccceeeeeeeccceeeehhhhhhcchhHHHHHHHHHHHHhhcCccHHHHhhhhccCCCeEEEEecccCccHHHHHHHh
Confidence 44699999999 6678999999999999999999999999999999999999999999999999999999999999988
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCCC--ccc---cCccCCCcc
Q 014478 80 ETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGK--SYS---TNLAFTPPE 154 (424)
Q Consensus 80 ~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~~--~~~---gt~~y~aPE 154 (424)
++..++....+.++.||.+|++||..++ +|||||...|||+.++..||++|||+++.....+ .+. ..+.|.|||
T Consensus 358 nr~ev~avvLlyMAtQIsSaMeYLEkkn-FIHRDLAARNCLVgEnhiVKvADFGLsRlMtgDTYTAHAGAKFPIKWTAPE 436 (1157)
T KOG4278|consen 358 NRSEVPAVVLLYMATQISSAMEYLEKKN-FIHRDLAARNCLVGENHIVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPE 436 (1157)
T ss_pred chhhcchhHHHHHHHHHHHHHHHHHHhh-hhhhhhhhhhccccccceEEeeccchhhhhcCCceecccCccCcccccCcc
Confidence 7888888899999999999999999999 9999999999999999999999999999876443 223 368899999
Q ss_pred ccccCCCCCCcceehhHHHHHHHhh-CCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHHHHHHHHHhcccCcCCCC
Q 014478 155 YMRTGRVTPESVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERP 233 (424)
Q Consensus 155 ~~~~~~~~~~~Dv~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rp 233 (424)
.+....++.|+|||+|||+|||+.| |-.|+|+ ++.-++..++...++..-|..|++.+.+|+..||++.|.+||
T Consensus 437 sLAyNtFSiKSDVWAFGVLLWEIATYGMsPYPG-----idlSqVY~LLEkgyRM~~PeGCPpkVYeLMraCW~WsPsDRP 511 (1157)
T KOG4278|consen 437 SLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPG-----IDLSQVYGLLEKGYRMDGPEGCPPKVYELMRACWNWSPSDRP 511 (1157)
T ss_pred cccccccccchhhHHHHHHHHHHHhcCCCCCCC-----ccHHHHHHHHhccccccCCCCCCHHHHHHHHHHhcCCcccCc
Confidence 9999999999999999999999987 5567776 566677888889999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHhh
Q 014478 234 NAKSLVISLMSLQK 247 (424)
Q Consensus 234 s~~~~~~~l~~~~~ 247 (424)
+++|+.+.++.+..
T Consensus 512 sFaeiHqafEtmf~ 525 (1157)
T KOG4278|consen 512 SFAEIHQAFETMFS 525 (1157)
T ss_pred cHHHHHHHHHHHhc
Confidence 99999999987754
|
|
| >PRK13184 pknD serine/threonine-protein kinase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-41 Score=346.16 Aligned_cols=414 Identities=16% Similarity=0.127 Sum_probs=274.4
Q ss_pred CCCcccceeee--ecceecccccCCC----chhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHhH
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESS----DLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKH 75 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~----~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~ 75 (424)
||+|.||.+.+ .+..|++|++... ....++|.+|++++++++||||+++++++.+++..++||||++||+|.++
T Consensus 13 GgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~HPNIVkl~~v~~d~~~lyLVMEY~eGGSL~~l 92 (932)
T PRK13184 13 GGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIVPVYSICSDGDPVYYTMPYIEGYTLKSL 92 (932)
T ss_pred CCCEEEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCCCcCcCeEEEEEeeCCEEEEEEEcCCCCCHHHH
Confidence 89999999987 4677888877543 22356789999999999999999999999999999999999999999998
Q ss_pred hccC---------CCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCC------
Q 014478 76 LFHW---------ETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRD------ 140 (424)
Q Consensus 76 l~~~---------~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~------ 140 (424)
+... ....+++..+++++.||+.||.|||+++ |+||||||+||+++.++.++|+|||+++....
T Consensus 93 L~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs~G-IIHRDLKPeNILLd~dg~vKLiDFGLAk~i~~~~~~~~ 171 (932)
T PRK13184 93 LKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHSKG-VLHRDLKPDNILLGLFGEVVILDWGAAIFKKLEEEDLL 171 (932)
T ss_pred HHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHHCC-ccccCCchheEEEcCCCCEEEEecCcceeccccccccc
Confidence 8531 1234567788999999999999999999 99999999999999999999999999876511
Q ss_pred ----------------CCccccCccCCCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhcc
Q 014478 141 ----------------GKSYSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSA 204 (424)
Q Consensus 141 ----------------~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~ 204 (424)
.....||+.|||||++.+..++.++|||||||++|||++|..||........... ......
T Consensus 172 ~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~g~~~S~kSDIWSLGVILyELLTG~~PF~~~~~~ki~~~---~~i~~P 248 (932)
T PRK13184 172 DIDVDERNICYSSMTIPGKIVGTPDYMAPERLLGVPASESTDIYALGVILYQMLTLSFPYRRKKGRKISYR---DVILSP 248 (932)
T ss_pred ccccccccccccccccCCCCCCCCCCCCHHHhcCCCCCcHhHHHHHHHHHHHHHHCCCCCCCcchhhhhhh---hhccCh
Confidence 0123589999999999988999999999999999999999988765321111110 111111
Q ss_pred cCCCCCchhHHHHHHHHHHhcccCcCCCC-CHHHHHHHHHHHhhhhhcCCchhhhcccC-------------CCCC--CC
Q 014478 205 LEGHFSNDEGTELVRLASRCLQSEARERP-NAKSLVISLMSLQKEAEQVPSYVLLGIQH-------------ETAP--ST 268 (424)
Q Consensus 205 ~~~~~~~~~~~~l~~li~~cl~~dp~~Rp-s~~~~~~~l~~~~~~~~~~~~~~~~~~~~-------------~~~~--~~ 268 (424)
........+++.+.+++.+||..||++|| +++++++.|.................... ...+ ..
T Consensus 249 ~~~~p~~~iP~~L~~LI~rcL~~DP~kR~ss~eeLl~~Le~~lq~~p~w~~~~~l~~~~~~~wk~~e~iLlsk~~~~l~~ 328 (932)
T PRK13184 249 IEVAPYREIPPFLSQIAMKALAVDPAERYSSVQELKQDLEPHLQGSPEWTVKATLMTKKKSCWKFYEPILLSKYFPMLES 328 (932)
T ss_pred hhccccccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhcCcccccccccccccchhccccchhhhhhhcccccC
Confidence 11111234677899999999999999995 67778788877654321100000000000 0000 00
Q ss_pred CCC--------------------------------CCCcccccccccchhH-HHHHH--------HhccccCCcch----
Q 014478 269 KPL--------------------------------SLTPLGEACSRLDLTA-IHEIL--------EGMGYKDDEGI---- 303 (424)
Q Consensus 269 ~~~--------------------------------~~~~~~~~~~~~~~~~-~~~~l--------~~~g~~~~~~~---- 303 (424)
.|. .+.|......+.+... ...++ ...-.++.+..
T Consensus 329 s~~~w~s~~is~ie~~~~~rie~~~~~~~~~~~~g~~l~p~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~ 408 (932)
T PRK13184 329 SPAQWYSLMISKIESSSETRLEYTVTKKGLHEGFGILLPPSEEAERGDFYCGYGLWLHIKNNELSVSLVKNGLEIQKKSQ 408 (932)
T ss_pred CchhheeccccccccccceeeeeeeccCccccccceecCcccccccCccccccceeeecccccceeeeecccceeecCCc
Confidence 000 0001110111111000 00000 00000000000
Q ss_pred -----hhh-----------hh---------------------hhhhhHhHHH--------------HHHHHHHHhHHHhh
Q 014478 304 -----ANE-----------LS---------------------FQMWTSQMQE--------------TLNSKKHGDTAFRA 332 (424)
Q Consensus 304 -----~~~-----------~s---------------------~~~~~~~~~~--------------~~~~~~~g~~~~~~ 332 (424)
... ++ .....++... ....+.-.+++...
T Consensus 409 ~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 488 (932)
T PRK13184 409 EIISQQETFAIAIEKSNHRISLFVDQTLWIIHIDYLPSRGGRIGIIIQDLQDIMSNIAIFESSGALRVSCLAVPDAFLAE 488 (932)
T ss_pred ccccccceeeEEEEEecchhhhhcccceEEEeeeccccCCceEEEEEecchhhccceEEEEecCceeeecccCcHHHHhh
Confidence 000 00 0000000110 11233446777888
Q ss_pred CCHHHHHHHHHHHhcCCCC--CCHHHHHHHHHHHHhc----C---ChHHHHHHHHHHHhcCCCchHHHHHHHHHHHhCCC
Q 014478 333 KDFSTAIDCYTQFIDGGTM--VSPTVYARRCLSYLMN----D---MPQEALGDAMQAQVVSPDWPTALYLQAACLFSLGM 403 (424)
Q Consensus 333 g~~~~A~~~~~~ai~~~p~--~~~~~~~~~~~~~~~~----~---~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~~~~ 403 (424)
+.|+.|+..|++.-.-.|+ ...++.+..|.+++.. + .+++|+..|++. .-.|.-+--|..+|.+|..+|+
T Consensus 489 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 567 (932)
T PRK13184 489 KLYDQALIFYRRIRESFPGRKEGYEAQFRLGITLLEKASEQGDPRDFTQALSEFSYL-HGGVGAPLEYLGKALVYQRLGE 567 (932)
T ss_pred HHHHHHHHHHHHHhhcCCCcccchHHHHHhhHHHHHHHHhcCChHHHHHHHHHHHHh-cCCCCCchHHHhHHHHHHHhhh
Confidence 9999999999999999986 2457888888888753 2 366677776653 3356677778999999999999
Q ss_pred hHHHHHHHHHHHhchhh
Q 014478 404 ENDARETLKDGTNLEAK 420 (424)
Q Consensus 404 ~~~A~~~~~~al~l~~~ 420 (424)
|+|-+++|.-|++--|.
T Consensus 568 ~~~~~~~~~~~~~~~~~ 584 (932)
T PRK13184 568 YNEEIKSLLLALKRYSQ 584 (932)
T ss_pred HHHHHHHHHHHHHhcCC
Confidence 99999999999987764
|
|
| >KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-42 Score=300.08 Aligned_cols=223 Identities=17% Similarity=0.236 Sum_probs=194.8
Q ss_pred CCCCcccceeee--ecceecccccCCCch----hhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHh
Q 014478 1 MGGRCSKFSICW--FHCHLKSSVLESSDL----GETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAK 74 (424)
Q Consensus 1 ~G~~g~v~~~~~--~~~~v~~~~~~~~~~----~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~ 74 (424)
+|+||.|-.+.. .+...|.|++.+... ..+...+|..+|+.+.||.++++++.|.+.+.++|||||++||.|..
T Consensus 54 tGSFGrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~~PFlv~l~~t~~d~~~lymvmeyv~GGElFS 133 (355)
T KOG0616|consen 54 TGSFGRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVSHPFLVKLYGTFKDNSNLYMVMEYVPGGELFS 133 (355)
T ss_pred cCccceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhccCceeEEEEEeeccCCeEEEEEeccCCccHHH
Confidence 589999988876 667788888866552 24566789999999999999999999999999999999999999999
Q ss_pred HhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCC-CccccCccCCCc
Q 014478 75 HLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG-KSYSTNLAFTPP 153 (424)
Q Consensus 75 ~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~-~~~~gt~~y~aP 153 (424)
++++ .+++++..+.-++.||+.||+|||+++ |++|||||+|||+|.+|.+||+|||+++..... -+.+||+.|+||
T Consensus 134 ~Lrk--~~rF~e~~arFYAAeivlAleylH~~~-iiYRDLKPENiLlD~~G~iKitDFGFAK~v~~rT~TlCGTPeYLAP 210 (355)
T KOG0616|consen 134 YLRK--SGRFSEPHARFYAAEIVLALEYLHSLD-IIYRDLKPENLLLDQNGHIKITDFGFAKRVSGRTWTLCGTPEYLAP 210 (355)
T ss_pred HHHh--cCCCCchhHHHHHHHHHHHHHHHHhcC-eeeccCChHHeeeccCCcEEEEeccceEEecCcEEEecCCccccCh
Confidence 9975 678999999999999999999999999 999999999999999999999999999987655 357899999999
Q ss_pred cccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHHHHHHHHHhcccCcCCC
Q 014478 154 EYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARER 232 (424)
Q Consensus 154 E~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~R 232 (424)
|.+...+++.++|.|||||++|||+.|.+||..+.. .....+++.... .+|.-.++++++|+.++|+.|-.+|
T Consensus 211 Eii~sk~ynkavDWWalGVLIYEMlaG~pPF~~~~~----~~iY~KI~~~~v--~fP~~fs~~~kdLl~~LL~vD~t~R 283 (355)
T KOG0616|consen 211 EIIQSKGYNKAVDWWALGVLIYEMLAGYPPFYDDNP----IQIYEKILEGKV--KFPSYFSSDAKDLLKKLLQVDLTKR 283 (355)
T ss_pred HHhhcCCCCcchhHHHHHHHHHHHHcCCCCCcCCCh----HHHHHHHHhCcc--cCCcccCHHHHHHHHHHHhhhhHhh
Confidence 999999999999999999999999999999887632 223333333333 3677778899999999999999999
|
|
| >cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.9e-42 Score=312.02 Aligned_cols=238 Identities=19% Similarity=0.324 Sum_probs=200.5
Q ss_pred CCCcccceeee--ecceecccccCCCchhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHhHhccC
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESSDLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHW 79 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~ 79 (424)
|++|.||.+.+ .+..+++|++..+......+.+|+++++.++||||+++++++......++||||+++++|.+++...
T Consensus 17 g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~ 96 (263)
T cd05052 17 GQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLREC 96 (263)
T ss_pred cccceEEEEEEecCCceEEEEEecCCchHHHHHHHHHHHHHhCCCCChhheEEEEcCCCCcEEEEEeCCCCcHHHHHHhC
Confidence 78899999988 4677888887766666778999999999999999999999999999999999999999999999654
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCCC-----ccccCccCCCcc
Q 014478 80 ETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGK-----SYSTNLAFTPPE 154 (424)
Q Consensus 80 ~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~~-----~~~gt~~y~aPE 154 (424)
....+++..++.++.|++.||.|||+++ ++||||||+||+++.++.+||+|||++....... ...++..|+|||
T Consensus 97 ~~~~l~~~~~~~~~~ql~~~l~~lH~~~-i~H~dlkp~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~y~aPE 175 (263)
T cd05052 97 NRQEVNAVVLLYMATQISSAMEYLEKKN-FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPE 175 (263)
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHhCC-EeecccCcceEEEcCCCcEEeCCCccccccccceeeccCCCCCccccCCHH
Confidence 4567899999999999999999999999 9999999999999999999999999988655432 122356799999
Q ss_pred ccccCCCCCCcceehhHHHHHHHhh-CCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHHHHHHHHHhcccCcCCCC
Q 014478 155 YMRTGRVTPESVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERP 233 (424)
Q Consensus 155 ~~~~~~~~~~~Dv~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rp 233 (424)
.+.+..++.++|||||||++|||++ |..|++..... ..............+..++.++.+++.+||..||++||
T Consensus 176 ~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp 250 (263)
T cd05052 176 SLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS-----QVYELLEKGYRMERPEGCPPKVYELMRACWQWNPSDRP 250 (263)
T ss_pred HhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHH-----HHHHHHHCCCCCCCCCCCCHHHHHHHHHHccCCcccCC
Confidence 9998889999999999999999998 88777653221 11122223333455667788999999999999999999
Q ss_pred CHHHHHHHHHHH
Q 014478 234 NAKSLVISLMSL 245 (424)
Q Consensus 234 s~~~~~~~l~~~ 245 (424)
|+.++++.|+.+
T Consensus 251 ~~~~l~~~l~~~ 262 (263)
T cd05052 251 SFAEIHQAFETM 262 (263)
T ss_pred CHHHHHHHHHhh
Confidence 999999998764
|
Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays |
| >cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-41 Score=319.87 Aligned_cols=241 Identities=16% Similarity=0.227 Sum_probs=192.6
Q ss_pred CCCcccceeeee--cceecccccCCC--chhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHhHhc
Q 014478 2 GGRCSKFSICWF--HCHLKSSVLESS--DLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLF 77 (424)
Q Consensus 2 G~~g~v~~~~~~--~~~v~~~~~~~~--~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~ 77 (424)
|++|.||.+.+. +..+++|++... ......+.+|+++|++++||||+++++++..++..++||||+++|+|.+++.
T Consensus 16 G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~ 95 (331)
T cd06649 16 GNGGVVTKVQHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLK 95 (331)
T ss_pred CCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEeecCCCCcHHHHHH
Confidence 899999999884 555666666433 2345678999999999999999999999999999999999999999999996
Q ss_pred cCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCC--CccccCccCCCccc
Q 014478 78 HWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG--KSYSTNLAFTPPEY 155 (424)
Q Consensus 78 ~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~--~~~~gt~~y~aPE~ 155 (424)
. ...+++..+..++.|++.||.|||+++.|+||||||+|||++.++.+||+|||++...... ....||..|+|||+
T Consensus 96 ~--~~~~~~~~~~~~~~~i~~~l~~lH~~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~g~~~y~aPE~ 173 (331)
T cd06649 96 E--AKRIPEEILGKVSIAVLRGLAYLREKHQIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPER 173 (331)
T ss_pred H--cCCCCHHHHHHHHHHHHHHHHHHhhcCCEEcCCCChhhEEEcCCCcEEEccCcccccccccccccCCCCcCcCCHhH
Confidence 4 4568999999999999999999998633999999999999999999999999998765432 34568999999999
Q ss_pred cccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhh---------------------------------------
Q 014478 156 MRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKN--------------------------------------- 196 (424)
Q Consensus 156 ~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~--------------------------------------- 196 (424)
+.+..++.++|||||||++|||++|+.||............
T Consensus 174 ~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (331)
T cd06649 174 LQGTHYSVQSDIWSMGLSLVELAIGRYPIPPPDAKELEAIFGRPVVDGEEGEPHSISPRPRPPGRPVSGHGMDSRPAMAI 253 (331)
T ss_pred hcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccccCCccccCcccccccccccccccccccchhH
Confidence 99888999999999999999999999888643211111000
Q ss_pred ---hhHhhhcccCCCCCchhHHHHHHHHHHhcccCcCCCCCHHHHHHHHHH
Q 014478 197 ---FLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERPNAKSLVISLMS 244 (424)
Q Consensus 197 ---~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~~~~~l~~ 244 (424)
...+.............++++.+||.+||..||++|||+++++++..-
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~~P~~Rpt~~ell~h~~~ 304 (331)
T cd06649 254 FELLDYIVNEPPPKLPNGVFTPDFQEFVNKCLIKNPAERADLKMLMNHTFI 304 (331)
T ss_pred HHHHHHHHhCCCcCCCCccccHHHHHHHHHHccCCcccCCCHHHHhcChHH
Confidence 000000111111122457889999999999999999999999988643
|
Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst |
| >cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.5e-42 Score=316.91 Aligned_cols=237 Identities=18% Similarity=0.231 Sum_probs=193.7
Q ss_pred CCCcccceeee--ecceecccccCCCc----hhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHhH
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESSD----LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKH 75 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~~----~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~ 75 (424)
|+||.||.+.+ .+..+++|++.... .....+.+|++++..++|+||+++++++.+++..++||||+++|+|..+
T Consensus 11 G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~ 90 (285)
T cd05631 11 GGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRFVVSLAYAYETKDALCLVLTIMNGGDLKFH 90 (285)
T ss_pred CCCEEEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCCCcEEEEEEEEccCCeEEEEEEecCCCcHHHH
Confidence 89999999987 46778887765332 2234678899999999999999999999999999999999999999988
Q ss_pred hccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCC---CccccCccCCC
Q 014478 76 LFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG---KSYSTNLAFTP 152 (424)
Q Consensus 76 l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~---~~~~gt~~y~a 152 (424)
+.......+++..+..++.|++.||.|||+++ ++||||||+|||++.++.+||+|||++...... ....||..|+|
T Consensus 91 ~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~-iiH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~g~~~y~a 169 (285)
T cd05631 91 IYNMGNPGFDEQRAIFYAAELCCGLEDLQRER-IVYRDLKPENILLDDRGHIRISDLGLAVQIPEGETVRGRVGTVGYMA 169 (285)
T ss_pred HHhhCCCCCCHHHHHHHHHHHHHHHHHHHhCC-EEeCCCCHHHEEECCCCCEEEeeCCCcEEcCCCCeecCCCCCCCccC
Confidence 86544457899999999999999999999999 999999999999999999999999998865432 23468999999
Q ss_pred ccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHHHHHHHHHhcccCcCCC
Q 014478 153 PEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARER 232 (424)
Q Consensus 153 PE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~R 232 (424)
||++.+..++.++|||||||++|+|++|+.||.......... ...... .......+...+.++.+|+.+||+.||.+|
T Consensus 170 PE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~-~~~~~~-~~~~~~~~~~~s~~~~~li~~~l~~~P~~R 247 (285)
T cd05631 170 PEVINNEKYTFSPDWWGLGCLIYEMIQGQSPFRKRKERVKRE-EVDRRV-KEDQEEYSEKFSEDAKSICRMLLTKNPKER 247 (285)
T ss_pred HhhhcCCCCCcccCchhHHHHHHHHHhCCCCCCCCCcchhHH-HHHHHh-hcccccCCccCCHHHHHHHHHHhhcCHHHh
Confidence 999998899999999999999999999998887532111111 111111 112223455678899999999999999999
Q ss_pred CC-----HHHHHHH
Q 014478 233 PN-----AKSLVIS 241 (424)
Q Consensus 233 ps-----~~~~~~~ 241 (424)
|+ +++++++
T Consensus 248 ~~~~~~~~~~~~~h 261 (285)
T cd05631 248 LGCRGNGAAGVKQH 261 (285)
T ss_pred cCCCCCCHHHHhcC
Confidence 97 7888875
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i |
| >cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.1e-42 Score=323.20 Aligned_cols=231 Identities=19% Similarity=0.228 Sum_probs=193.3
Q ss_pred CCCcccceeee--ecceecccccCCCc----hhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHhH
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESSD----LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKH 75 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~~----~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~ 75 (424)
|+||.||.+.. .+..+++|++.... .....+.+|++++++++||||+++++++..++..++||||+++|+|.++
T Consensus 6 G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~ 85 (323)
T cd05571 6 GTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRHPFLTALKYSFQTHDRLCFVMEYANGGELFFH 85 (323)
T ss_pred CCCeEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCCEEEEEEcCCEEEEEEeCCCCCcHHHH
Confidence 89999998876 56678888775432 2345678899999999999999999999999999999999999999999
Q ss_pred hccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCC----CCccccCccCC
Q 014478 76 LFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRD----GKSYSTNLAFT 151 (424)
Q Consensus 76 l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~----~~~~~gt~~y~ 151 (424)
+.. ...+++.++..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++.... .....||+.|+
T Consensus 86 l~~--~~~~~~~~~~~~~~qi~~~L~~lH~~~-ivHrDlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~~~gt~~y~ 162 (323)
T cd05571 86 LSR--ERVFSEDRARFYGAEIVSALGYLHSCD-VVYRDLKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYL 162 (323)
T ss_pred HHH--cCCCCHHHHHHHHHHHHHHHHHHHhCC-eEeCCCCHHHEEECCCCCEEEeeCCCCcccccCCCcccceecCcccc
Confidence 864 467899999999999999999999999 99999999999999999999999999875322 23356899999
Q ss_pred CccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHHHHHHHHHhcccCcCC
Q 014478 152 PPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARE 231 (424)
Q Consensus 152 aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~ 231 (424)
|||++.+..++.++|||||||++|||++|..||.......... ..... ....+..+++++.++|.+||..||++
T Consensus 163 aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~----~~~~~--~~~~p~~~~~~~~~li~~~L~~dP~~ 236 (323)
T cd05571 163 APEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFE----LILME--EIRFPRTLSPEAKSLLAGLLKKDPKQ 236 (323)
T ss_pred ChhhhcCCCCCccccCcccchhhhhhhcCCCCCCCCCHHHHHH----HHHcC--CCCCCCCCCHHHHHHHHHHccCCHHH
Confidence 9999998889999999999999999999998886542221111 11111 22345667889999999999999999
Q ss_pred CC-----CHHHHHHH
Q 014478 232 RP-----NAKSLVIS 241 (424)
Q Consensus 232 Rp-----s~~~~~~~ 241 (424)
|| ++.+++++
T Consensus 237 R~~~~~~~~~~ll~h 251 (323)
T cd05571 237 RLGGGPEDAKEIMEH 251 (323)
T ss_pred cCCCCCCCHHHHHcC
Confidence 99 79999875
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be |
| >PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-42 Score=316.59 Aligned_cols=236 Identities=25% Similarity=0.432 Sum_probs=190.8
Q ss_pred CCCCcccceeeee------cceecccccCCC--chhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCH
Q 014478 1 MGGRCSKFSICWF------HCHLKSSVLESS--DLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETL 72 (424)
Q Consensus 1 ~G~~g~v~~~~~~------~~~v~~~~~~~~--~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL 72 (424)
.|.||.||++.|. +..|++|++... ....+.|.+|++.+++++||||++++|++...+..++||||+++|+|
T Consensus 9 ~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~g~~~~~~~~~lv~e~~~~g~L 88 (259)
T PF07714_consen 9 EGSFGKVYRAEWKQKDNDKNQPVAVKILKPSSSEEEEEEFLNEIQILRKLRHPNIVKLYGFCIENEPLFLVMEYCPGGSL 88 (259)
T ss_dssp EESSEEEEEEEEESTTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTHSBTTBE-EEEEEESSSSEEEEEE--TTEBH
T ss_pred cCCCcEEEEEEEEcccCCCCEEEEEEEeccccccccceeeeecccccccccccccccccccccccccccccccccccccc
Confidence 4899999999998 677788887543 23468999999999999999999999999988889999999999999
Q ss_pred HhHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCC------Ccccc
Q 014478 73 AKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG------KSYST 146 (424)
Q Consensus 73 ~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~------~~~~g 146 (424)
.+++.......+++.+++.|+.||+.||.|||+++ ++|+||+++||+++.++.+||+|||+++..... .....
T Consensus 89 ~~~L~~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~-iiH~~l~~~nill~~~~~~Kl~~f~~~~~~~~~~~~~~~~~~~~ 167 (259)
T PF07714_consen 89 DDYLKSKNKEPLSEQQRLSIAIQIAEALSYLHSNN-IIHGNLSPSNILLDSNGQVKLSDFGLSRPISEKSKYKNDSSQQL 167 (259)
T ss_dssp HHHHHHTCTTTSBHHHHHHHHHHHHHHHHHHHHTT-EEEST-SGGGEEEETTTEEEEESTTTGEETTTSSSEEESTTSES
T ss_pred ccccccccccccccccccccccccccccccccccc-cccccccccccccccccccccccccccccccccccccccccccc
Confidence 99998754678999999999999999999999999 999999999999999999999999998876322 22345
Q ss_pred CccCCCccccccCCCCCCcceehhHHHHHHHhh-CCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHHHHHHHHHhc
Q 014478 147 NLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCL 225 (424)
Q Consensus 147 t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl 225 (424)
...|+|||.+.+..++.++||||||+++|||++ |+.|+... ....+...+........+..++..+.+++.+||
T Consensus 168 ~~~~~aPE~~~~~~~~~ksDVysfG~~l~ei~~~~~~p~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~C~ 242 (259)
T PF07714_consen 168 PLRYLAPEVLKDGEYTKKSDVYSFGMLLYEILTLGKFPFSDY-----DNEEIIEKLKQGQRLPIPDNCPKDIYSLIQQCW 242 (259)
T ss_dssp GGGGS-HHHHHHSEESHHHHHHHHHHHHHHHHTTSSGTTTTS-----CHHHHHHHHHTTEETTSBTTSBHHHHHHHHHHT
T ss_pred cccccccccccccccccccccccccccccccccccccccccc-----ccccccccccccccceeccchhHHHHHHHHHHc
Confidence 678999999998889999999999999999999 56665543 222222222333334456667889999999999
Q ss_pred ccCcCCCCCHHHHHHHH
Q 014478 226 QSEARERPNAKSLVISL 242 (424)
Q Consensus 226 ~~dp~~Rps~~~~~~~l 242 (424)
..||.+|||+.++++.|
T Consensus 243 ~~~p~~RPs~~~i~~~L 259 (259)
T PF07714_consen 243 SHDPEKRPSFQEILQEL 259 (259)
T ss_dssp -SSGGGS--HHHHHHHH
T ss_pred CCChhhCcCHHHHHhcC
Confidence 99999999999998765
|
Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A .... |
| >KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.5e-42 Score=344.82 Aligned_cols=245 Identities=21% Similarity=0.292 Sum_probs=205.7
Q ss_pred CCCCcccceeeee---c----ceecccccCCC--chhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCC
Q 014478 1 MGGRCSKFSICWF---H----CHLKSSVLESS--DLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNET 71 (424)
Q Consensus 1 ~G~~g~v~~~~~~---~----~~v~~~~~~~~--~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gs 71 (424)
+|.||.||.+.+. + .+|++|.+... ......|++|..+|+.++|||||+++|+|.+....+|++|||+||+
T Consensus 702 ~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~~~~~~~~Fl~Ea~~m~~f~HpNiv~liGv~l~~~~~~i~leyM~gGD 781 (1025)
T KOG1095|consen 702 KGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLSSEQEVSDFLKEALLMSKFDHPNIVSLIGVCLDSGPPLILLEYMEGGD 781 (1025)
T ss_pred cccccceEEEEEecCCCCccceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCcceeeEEEeecCCCCcEEEehhcccCc
Confidence 5999999999872 2 23677777654 4567899999999999999999999999999889999999999999
Q ss_pred HHhHhccC-----CCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCCCc---
Q 014478 72 LAKHLFHW-----ETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKS--- 143 (424)
Q Consensus 72 L~~~l~~~-----~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~~~--- 143 (424)
|..+|++. ....++..+.+.++.|||+|+.||++++ +|||||..+|||++....|||+|||+|+.+.....
T Consensus 782 L~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~~~-fvHRDLAaRNCLL~~~r~VKIaDFGlArDiy~~~yyr~ 860 (1025)
T KOG1095|consen 782 LLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLESKH-FVHRDLAARNCLLDERRVVKIADFGLARDIYDKDYYRK 860 (1025)
T ss_pred HHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHhCC-CcCcchhhhheeecccCcEEEcccchhHhhhhchheec
Confidence 99999763 1456889999999999999999999999 99999999999999999999999999995543321
Q ss_pred ---cccCccCCCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHHHHHH
Q 014478 144 ---YSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRL 220 (424)
Q Consensus 144 ---~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 220 (424)
..-...|||||.+..+.++.|+|||||||++||++|...+++.. ..+..+...+...-+...|..||..+.++
T Consensus 861 ~~~a~lPvkWm~PEsl~d~iFtskSDvWsFGVllWEifslG~~PY~~----~~n~~v~~~~~~ggRL~~P~~CP~~ly~l 936 (1025)
T KOG1095|consen 861 HGEAMLPVKWMPPESLKDGIFTSKSDVWSFGVLLWEIFSLGATPYPS----RSNFEVLLDVLEGGRLDPPSYCPEKLYQL 936 (1025)
T ss_pred cCccccceecCCHHHHhhcccccccchhhhHHHHHHHHhCCCCCCCC----cchHHHHHHHHhCCccCCCCCCChHHHHH
Confidence 12347899999999999999999999999999999966544443 33334444333333777888999999999
Q ss_pred HHHhcccCcCCCCCHHHHHHHHHHHhhhhh
Q 014478 221 ASRCLQSEARERPNAKSLVISLMSLQKEAE 250 (424)
Q Consensus 221 i~~cl~~dp~~Rps~~~~~~~l~~~~~~~~ 250 (424)
+..||+.+|++||++..|++.+..+.....
T Consensus 937 M~~CW~~~pe~RP~F~~i~~q~~~i~~~~~ 966 (1025)
T KOG1095|consen 937 MLQCWKHDPEDRPSFRTIVEQDPAISNAAL 966 (1025)
T ss_pred HHHHccCChhhCccHHHHHhhhhhhhhhhc
Confidence 999999999999999999998887776543
|
|
| >cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-41 Score=326.47 Aligned_cols=241 Identities=20% Similarity=0.309 Sum_probs=195.1
Q ss_pred CCCCcccceeeeec-------ceecccccCCCc--hhhhHHHHHHHHHhcC-CCcCcceeEEEEEeCCeeeEEEecCCCC
Q 014478 1 MGGRCSKFSICWFH-------CHLKSSVLESSD--LGETLNLEEAKAVGNL-RSERLANLIGCCYEADERLLVAEFMPNE 70 (424)
Q Consensus 1 ~G~~g~v~~~~~~~-------~~v~~~~~~~~~--~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~~~~g 70 (424)
.||||.||.+.+.. ..|++|++.... .....+.+|+++++.+ +||||++++++|......++||||+++|
T Consensus 48 ~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~~h~nIv~~~~~~~~~~~~~lv~ey~~~g 127 (374)
T cd05106 48 AGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAHTDEREALMSELKILSHLGQHKNIVNLLGACTHGGPVLVITEYCCYG 127 (374)
T ss_pred CCCcccEEEEEEecCCcccccceeEEEeccCCCCHHHHHHHHHHHHHHHhhccCCceeeEeeEecCCCCeEEeHhhccCC
Confidence 38999999988632 357777775432 3356788999999999 8999999999999999999999999999
Q ss_pred CHHhHhccCC--------------------------------------------------------------------CC
Q 014478 71 TLAKHLFHWE--------------------------------------------------------------------TQ 82 (424)
Q Consensus 71 sL~~~l~~~~--------------------------------------------------------------------~~ 82 (424)
+|.+++.... ..
T Consensus 128 ~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (374)
T cd05106 128 DLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRPVSSSSSQSSDSKDEEDTEDSW 207 (374)
T ss_pred cHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccccccccCCccccccccccccchhccCCCC
Confidence 9999885311 12
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCCC------ccccCccCCCcccc
Q 014478 83 PMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGK------SYSTNLAFTPPEYM 156 (424)
Q Consensus 83 ~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~~------~~~gt~~y~aPE~~ 156 (424)
++++.++++++.||+.||.|||+++ ++||||||+|||++.++.+||+|||+++...... ...++..|||||++
T Consensus 208 ~l~~~~~~~i~~qi~~aL~yLH~~g-iiHrDLkp~Nil~~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~ 286 (374)
T cd05106 208 PLDLDDLLRFSSQVAQGMDFLASKN-CIHRDVAARNVLLTDGRVAKICDFGLARDIMNDSNYVVKGNARLPVKWMAPESI 286 (374)
T ss_pred CcCHHHHHHHHHHHHHHHHHHHHCC-EEeccCchheEEEeCCCeEEEeeceeeeeccCCcceeeccCCCCccceeCHHHh
Confidence 5788999999999999999999999 9999999999999999999999999987654322 12345679999999
Q ss_pred ccCCCCCCcceehhHHHHHHHhh-CCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHHHHHHHHHhcccCcCCCCCH
Q 014478 157 RTGRVTPESVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERPNA 235 (424)
Q Consensus 157 ~~~~~~~~~Dv~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~ 235 (424)
.+..++.++|||||||++|||++ |+.||+.... ................+...++++.+++.+||+.||++|||+
T Consensus 287 ~~~~~~~~~DvwSlGvil~ellt~G~~Pf~~~~~----~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~ 362 (374)
T cd05106 287 FDCVYTVQSDVWSYGILLWEIFSLGKSPYPGILV----NSKFYKMVKRGYQMSRPDFAPPEIYSIMKMCWNLEPTERPTF 362 (374)
T ss_pred cCCCCCccccHHHHHHHHHHHHhCCCCCCccccc----cHHHHHHHHcccCccCCCCCCHHHHHHHHHHcCCChhhCcCH
Confidence 88889999999999999999997 8888765321 112222333333333445567899999999999999999999
Q ss_pred HHHHHHHHHHh
Q 014478 236 KSLVISLMSLQ 246 (424)
Q Consensus 236 ~~~~~~l~~~~ 246 (424)
.++++.|+.+.
T Consensus 363 ~~l~~~l~~~~ 373 (374)
T cd05106 363 SQISQLIQRQL 373 (374)
T ss_pred HHHHHHHHHHh
Confidence 99999998763
|
Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti |
| >cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-41 Score=309.78 Aligned_cols=237 Identities=19% Similarity=0.248 Sum_probs=193.3
Q ss_pred CCCcccceeeee-----cceecccccCCCc--hhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHh
Q 014478 2 GGRCSKFSICWF-----HCHLKSSVLESSD--LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAK 74 (424)
Q Consensus 2 G~~g~v~~~~~~-----~~~v~~~~~~~~~--~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~ 74 (424)
|+||.||++.+. +..+++|.+.... .....|.+|+.++..++||||+++++++..++..++||||+++|+|.+
T Consensus 16 G~fg~V~~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~ 95 (266)
T cd05064 16 GRFGELCRGCLKLPSKRELPVAIHTLRAGCSDKQRRGFLAEALTLGQFDHSNIVRLEGVITRGNTMMIVTEYMSNGALDS 95 (266)
T ss_pred cCCCeEEEEEEecCCCceeeEEEEecCCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEecCCCcEEEEEeCCCCcHHH
Confidence 899999999763 3456666665432 334678999999999999999999999999999999999999999999
Q ss_pred HhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCCC-----ccccCcc
Q 014478 75 HLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGK-----SYSTNLA 149 (424)
Q Consensus 75 ~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~~-----~~~gt~~ 149 (424)
++.. ....+++.+++.++.|++.||+|||+++ ++||||||+||+++.++.++++|||.+....... ...++..
T Consensus 96 ~l~~-~~~~l~~~~~~~~~~~i~~al~~lH~~~-iiH~dikp~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~ 173 (266)
T cd05064 96 FLRK-HEGQLVAGQLMGMLPGLASGMKYLSEMG-YVHKGLAAHKVLVNSDLVCKISGFRRLQEDKSEAIYTTMSGKSPVL 173 (266)
T ss_pred HHHh-CCCCCCHHHHHHHHHHHHHHHHHHHHCC-EeeccccHhhEEEcCCCcEEECCCcccccccccchhcccCCCCcee
Confidence 9865 2457899999999999999999999999 9999999999999999999999999876543221 2234578
Q ss_pred CCCccccccCCCCCCcceehhHHHHHHHhh-CCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHHHHHHHHHhcccC
Q 014478 150 FTPPEYMRTGRVTPESVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSE 228 (424)
Q Consensus 150 y~aPE~~~~~~~~~~~Dv~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~d 228 (424)
|+|||.+.+..++.++|||||||++||+++ |..||...... .....+........+..++..+.+++.+||+.+
T Consensus 174 y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~p~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~li~~c~~~~ 248 (266)
T cd05064 174 WAAPEAIQYHHFSSASDVWSFGIVMWEVMSYGERPYWDMSGQ-----DVIKAVEDGFRLPAPRNCPNLLHQLMLDCWQKE 248 (266)
T ss_pred ecCHHHHhhCCccchhHHHHHHHHHHHHhcCCCCCcCcCCHH-----HHHHHHHCCCCCCCCCCCCHHHHHHHHHHcCCC
Confidence 999999998899999999999999999775 88777653221 111222222333456677889999999999999
Q ss_pred cCCCCCHHHHHHHHHHH
Q 014478 229 ARERPNAKSLVISLMSL 245 (424)
Q Consensus 229 p~~Rps~~~~~~~l~~~ 245 (424)
|.+|||++++.+.|..+
T Consensus 249 p~~RP~~~~i~~~l~~~ 265 (266)
T cd05064 249 RGERPRFSQIHSILSKM 265 (266)
T ss_pred chhCCCHHHHHHHHHhh
Confidence 99999999999988654
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor |
| >cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-41 Score=326.05 Aligned_cols=240 Identities=20% Similarity=0.306 Sum_probs=192.7
Q ss_pred CCCCcccceeeee-------cceecccccCCCc--hhhhHHHHHHHHHhcC-CCcCcceeEEEEEeCCeeeEEEecCCCC
Q 014478 1 MGGRCSKFSICWF-------HCHLKSSVLESSD--LGETLNLEEAKAVGNL-RSERLANLIGCCYEADERLLVAEFMPNE 70 (424)
Q Consensus 1 ~G~~g~v~~~~~~-------~~~v~~~~~~~~~--~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~~~~g 70 (424)
.||||.||++.+. +..+++|++.... ...+.+.+|+++|..+ +||||++++++|..++..++||||++||
T Consensus 45 ~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~il~~l~~HpnIv~l~~~~~~~~~~~lv~E~~~~g 124 (375)
T cd05104 45 AGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHINIVNLLGACTVGGPTLVITEYCCYG 124 (375)
T ss_pred CCccceEEEEEEeccccCccceeEEEEeccCCcCcHHHHHHHHHHHHHHHhcCCcceeeeeeeeccCCcceeeehhccCC
Confidence 3899999998763 2357777775433 3456788999999999 8999999999999999999999999999
Q ss_pred CHHhHhccCC----------------------------------------------------------------------
Q 014478 71 TLAKHLFHWE---------------------------------------------------------------------- 80 (424)
Q Consensus 71 sL~~~l~~~~---------------------------------------------------------------------- 80 (424)
+|.+++....
T Consensus 125 ~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (375)
T cd05104 125 DLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKADKRRSVRSGSYIDQDVTSEIL 204 (375)
T ss_pred cHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCcccccccccccccccccceecccccHHHHH
Confidence 9999985321
Q ss_pred ---CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCCC------ccccCccCC
Q 014478 81 ---TQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGK------SYSTNLAFT 151 (424)
Q Consensus 81 ---~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~~------~~~gt~~y~ 151 (424)
...+++..+++++.||+.||.|||+++ ++||||||+|||++.++.+||+|||+++...... ...++..|+
T Consensus 205 ~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~-ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~y~ 283 (375)
T cd05104 205 EEDELALDTEDLLSFSYQVAKGMSFLASKN-CIHRDLAARNILLTHGRITKICDFGLARDIRNDSNYVVKGNARLPVKWM 283 (375)
T ss_pred hccCCCCCHHHHHHHHHHHHHHHHHHHHCC-eeccCCchhhEEEECCCcEEEecCccceeccCcccccccCCCCCCccee
Confidence 125788899999999999999999999 9999999999999999999999999987654322 123456799
Q ss_pred CccccccCCCCCCcceehhHHHHHHHhh-CCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHHHHHHHHHhcccCcC
Q 014478 152 PPEYMRTGRVTPESVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEAR 230 (424)
Q Consensus 152 aPE~~~~~~~~~~~Dv~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~ 230 (424)
|||++.+..++.++|||||||++|||++ |..||...... ......+........+...+.++.+++.+||+.||+
T Consensus 284 aPE~~~~~~~~~~sDi~slG~~l~ellt~g~~p~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~ 359 (375)
T cd05104 284 APESIFNCVYTFESDVWSYGILLWEIFSLGSSPYPGMPVD----SKFYKMIKEGYRMLSPECAPSEMYDIMKSCWDADPL 359 (375)
T ss_pred ChhHhcCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCch----HHHHHHHHhCccCCCCCCCCHHHHHHHHHHccCChh
Confidence 9999998899999999999999999998 77666543111 112222222223333445678999999999999999
Q ss_pred CCCCHHHHHHHHHHH
Q 014478 231 ERPNAKSLVISLMSL 245 (424)
Q Consensus 231 ~Rps~~~~~~~l~~~ 245 (424)
+|||+.++++.|++.
T Consensus 360 ~RPs~~eil~~l~~~ 374 (375)
T cd05104 360 KRPTFKQIVQLIEQQ 374 (375)
T ss_pred HCcCHHHHHHHHHhh
Confidence 999999999998753
|
Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce |
| >KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.1e-42 Score=290.70 Aligned_cols=237 Identities=19% Similarity=0.197 Sum_probs=193.0
Q ss_pred CCCcccceeee--ecceecccccCCCchh---hhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHhHh
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESSDLG---ETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHL 76 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~~~~---~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~l 76 (424)
|.+|.||++++ .+..||+|++...+.. .....+|++.|+.++|+||+.++++|.+.+.+.||+||++. +|+.++
T Consensus 13 G~~gvVyka~d~~t~~~VAIKKIkl~~~kdGi~~talREIK~Lqel~h~nIi~LiD~F~~~~~l~lVfEfm~t-dLe~vI 91 (318)
T KOG0659|consen 13 GTYGVVYKARDTETGKRVAIKKIKLGNAKDGINRTALREIKLLQELKHPNIIELIDVFPHKSNLSLVFEFMPT-DLEVVI 91 (318)
T ss_pred cceEEEEEEEecCCCcEEEEEEeeccccccCccHHHHHHHHHHHHccCcchhhhhhhccCCCceEEEEEeccc-cHHHHh
Confidence 78999999998 7788999888644322 34678999999999999999999999999999999999987 999999
Q ss_pred ccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCC----CccccCccCCC
Q 014478 77 FHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG----KSYSTNLAFTP 152 (424)
Q Consensus 77 ~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~----~~~~gt~~y~a 152 (424)
++ ....++..++..++.++++||+|||++. |+||||||.|+|++.+|.+||+|||+++..... .....|..|.|
T Consensus 92 kd-~~i~l~pa~iK~y~~m~LkGl~y~H~~~-IlHRDlKPnNLLis~~g~lKiADFGLAr~f~~p~~~~~~~V~TRWYRA 169 (318)
T KOG0659|consen 92 KD-KNIILSPADIKSYMLMTLKGLAYCHSKW-ILHRDLKPNNLLISSDGQLKIADFGLARFFGSPNRIQTHQVVTRWYRA 169 (318)
T ss_pred cc-cccccCHHHHHHHHHHHHHHHHHHHhhh-hhcccCCccceEEcCCCcEEeecccchhccCCCCcccccceeeeeccC
Confidence 76 5678999999999999999999999999 999999999999999999999999999987643 23367899999
Q ss_pred ccccccC-CCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhH----------------------hhhcccCCCC
Q 014478 153 PEYMRTG-RVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLL----------------------LMDSALEGHF 209 (424)
Q Consensus 153 PE~~~~~-~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~----------------------~~~~~~~~~~ 209 (424)
||.+.|. .|+...|+||.||++.||+-|.+.|++.+.-.--...+.. ..........
T Consensus 170 PELLfGsr~Yg~~VDmWavGCI~AELllr~P~fpG~sDidQL~~If~~LGTP~~~~WP~~~~lpdY~~~~~~P~~~~~~l 249 (318)
T KOG0659|consen 170 PELLFGSRQYGTGVDMWAVGCIFAELLLRVPFFPGDSDIDQLSKIFRALGTPTPDQWPEMTSLPDYVKIQQFPKPPLNNL 249 (318)
T ss_pred hHHhccchhcCCcchhhhHHHHHHHHHccCCCCCCCchHHHHHHHHHHcCCCCcccCccccccccHHHHhcCCCCccccc
Confidence 9999875 5999999999999999999999777765211110000100 0011111111
Q ss_pred CchhHHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 014478 210 SNDEGTELVRLASRCLQSEARERPNAKSLVIS 241 (424)
Q Consensus 210 ~~~~~~~l~~li~~cl~~dp~~Rps~~~~~~~ 241 (424)
-..++.+..+|+.++|..||.+|+|+.+++++
T Consensus 250 f~aas~d~ldLl~~m~~ynP~~Rita~qaL~~ 281 (318)
T KOG0659|consen 250 FPAASSDALDLLSKMLTYNPKKRITASQALKH 281 (318)
T ss_pred cccccHHHHHHHHhhhccCchhcccHHHHhcc
Confidence 22356778999999999999999999999865
|
|
| >KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-41 Score=315.52 Aligned_cols=232 Identities=17% Similarity=0.155 Sum_probs=194.3
Q ss_pred CCCcccceeee--ecceecccccCCCchh----hhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHhH
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESSDLG----ETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKH 75 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~~~~----~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~ 75 (424)
|+||.||.+.- .+..+|.|++.++... .+-.+.|-.+|....+|+||+++-.|.+...+||||||++||++..+
T Consensus 152 GAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~ds~~vVKLyYsFQD~~~LYLiMEylPGGD~mTL 231 (550)
T KOG0605|consen 152 GAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEVDSPWVVKLYYSFQDKEYLYLIMEYLPGGDMMTL 231 (550)
T ss_pred ccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhcCCCcEEEEEEEecCCCeeEEEEEecCCccHHHH
Confidence 89999998865 7888999999887743 34566799999999999999999999999999999999999999999
Q ss_pred hccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCC----------------
Q 014478 76 LFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSR---------------- 139 (424)
Q Consensus 76 l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~---------------- 139 (424)
|.+ .+.|++.++..++.+++.|+..||+.| +|||||||+|+|||..|++||+||||+.-..
T Consensus 232 L~~--~~~L~e~~arfYiaE~vlAI~~iH~~g-yIHRDIKPdNlLiD~~GHiKLSDFGLs~gl~~~~~~~~~~~~~~~~~ 308 (550)
T KOG0605|consen 232 LMR--KDTLTEDWARFYIAETVLAIESIHQLG-YIHRDIKPDNLLIDAKGHIKLSDFGLSTGLDKKHRIESYRLDEQMQI 308 (550)
T ss_pred HHh--cCcCchHHHHHHHHHHHHHHHHHHHcC-cccccCChhheeecCCCCEeeccccccchhhhhhhhhhhcchhhhhh
Confidence 975 678999999999999999999999999 9999999999999999999999999975210
Q ss_pred ----------C-----C--------------------CccccCccCCCccccccCCCCCCcceehhHHHHHHHhhCCCCC
Q 014478 140 ----------D-----G--------------------KSYSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIP 184 (424)
Q Consensus 140 ----------~-----~--------------------~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~ 184 (424)
. . .+..|||.|||||++.+..|+..+|.||||||+|||+.|.+||
T Consensus 309 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~nrr~~a~StVGTPDYiAPEVll~kgY~~~cDwWSLG~ImyEmLvGyPPF 388 (550)
T KOG0605|consen 309 NLSEAKPSDFPKFNTPRSTMSRREQLQTWKRNRRQLAYSTVGTPDYIAPEVLLGKGYGKECDWWSLGCIMYEMLVGYPPF 388 (550)
T ss_pred hhccCCCccccccccccchhhHHHHHHHHHhhhhhhhhcccCCccccchHHHhcCCCCccccHHHHHHHHHHHHhCCCCC
Confidence 0 0 0235899999999999999999999999999999999999888
Q ss_pred CchhhHHHhhhhhhHhh--hcccCCCCCchhHHHHHHHHHHhcccCcCCCC---CHHHHHHH
Q 014478 185 PSHALDLIRSKNFLLLM--DSALEGHFSNDEGTELVRLASRCLQSEARERP---NAKSLVIS 241 (424)
Q Consensus 185 ~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rp---s~~~~~~~ 241 (424)
..... ...+..++ ...+..+....++.+..+||.+||. ||++|- .++||.+|
T Consensus 389 ~s~tp----~~T~rkI~nwr~~l~fP~~~~~s~eA~DLI~rll~-d~~~RLG~~G~~EIK~H 445 (550)
T KOG0605|consen 389 CSETP----QETYRKIVNWRETLKFPEEVDLSDEAKDLITRLLC-DPENRLGSKGAEEIKKH 445 (550)
T ss_pred CCCCH----HHHHHHHHHHhhhccCCCcCcccHHHHHHHHHHhc-CHHHhcCcccHHHHhcC
Confidence 87522 22222222 2234434445567999999999999 999994 67777654
|
|
| >cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-41 Score=311.20 Aligned_cols=237 Identities=20% Similarity=0.282 Sum_probs=194.7
Q ss_pred CCCcccceeeeecc-------eecccccCCCc--hhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCH
Q 014478 2 GGRCSKFSICWFHC-------HLKSSVLESSD--LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETL 72 (424)
Q Consensus 2 G~~g~v~~~~~~~~-------~v~~~~~~~~~--~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL 72 (424)
|++|.||.+.+.+. .+++|.+.... .....|.+|++++..++||||+++++++......+++|||+++|+|
T Consensus 16 G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~e~~~~~~L 95 (283)
T cd05048 16 GAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELMSDLQHPNIVCLLGVCTKEQPTCMLFEYLAHGDL 95 (283)
T ss_pred ccCCcEEEEEEecCCCCcceeeEEEEecccCCCHHHHHHHHHHHHHHHhcCCcccceEEEEEcCCCceEEEEecCCCCcH
Confidence 89999999987443 36666664332 3356788999999999999999999999998889999999999999
Q ss_pred HhHhccCCC--------------CCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccC
Q 014478 73 AKHLFHWET--------------QPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNS 138 (424)
Q Consensus 73 ~~~l~~~~~--------------~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~ 138 (424)
.+++..... ..+++.+++.++.|++.||.|||+++ ++||||||+||+++.++.++|+|||+++..
T Consensus 96 ~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~~~-i~H~dlkp~Nil~~~~~~~~L~dfg~~~~~ 174 (283)
T cd05048 96 HEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSSHH-FVHRDLAARNCLVGEGLTVKISDFGLSRDI 174 (283)
T ss_pred HHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhCC-eeccccccceEEEcCCCcEEECCCcceeec
Confidence 999864311 45888999999999999999999999 999999999999999999999999998764
Q ss_pred CCC------CccccCccCCCccccccCCCCCCcceehhHHHHHHHhh-CCCCCCchhhHHHhhhhhhHhhhcccCCCCCc
Q 014478 139 RDG------KSYSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKNFLLLMDSALEGHFSN 211 (424)
Q Consensus 139 ~~~------~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 211 (424)
... ....+++.|+|||.+.++.++.++|||||||++|||++ |..||...... .....+........+.
T Consensus 175 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~il~el~~~g~~p~~~~~~~-----~~~~~i~~~~~~~~~~ 249 (283)
T cd05048 175 YSADYYRVQSKSLLPVRWMPPEAILYGKFTTESDIWSFGVVLWEIFSYGLQPYYGFSNQ-----EVIEMIRSRQLLPCPE 249 (283)
T ss_pred cccccccccCCCcccccccCHHHhccCcCchhhhHHHHHHHHHHHHcCCCCCCCCCCHH-----HHHHHHHcCCcCCCcc
Confidence 322 22345788999999988889999999999999999998 88777653221 1222222333334566
Q ss_pred hhHHHHHHHHHHhcccCcCCCCCHHHHHHHHHH
Q 014478 212 DEGTELVRLASRCLQSEARERPNAKSLVISLMS 244 (424)
Q Consensus 212 ~~~~~l~~li~~cl~~dp~~Rps~~~~~~~l~~ 244 (424)
.++.++.+|+.+||+.||.+||++.+|+++|+.
T Consensus 250 ~~~~~~~~l~~~c~~~~p~~Rp~~~~i~~~l~~ 282 (283)
T cd05048 250 DCPARVYALMIECWNEIPARRPRFKDIHTRLRS 282 (283)
T ss_pred cCCHHHHHHHHHHccCChhhCcCHHHHHHHHhc
Confidence 788999999999999999999999999999864
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer |
| >cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-41 Score=318.07 Aligned_cols=231 Identities=17% Similarity=0.183 Sum_probs=191.4
Q ss_pred CCCcccceeee--ecceecccccCCC----chhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHhH
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESS----DLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKH 75 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~----~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~ 75 (424)
|+||.||.+.+ .+..+++|++... ......+.+|+.++.+++||||+++++++...+..++||||+++|+|.++
T Consensus 4 G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~ 83 (312)
T cd05585 4 GSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFIVPLKFSFQSPEKLYLVLAFINGGELFHH 83 (312)
T ss_pred CCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCcEeceeeEEecCCeEEEEEcCCCCCcHHHH
Confidence 89999999987 4556777776532 23456778899999999999999999999999999999999999999999
Q ss_pred hccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCC----CccccCccCC
Q 014478 76 LFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG----KSYSTNLAFT 151 (424)
Q Consensus 76 l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~----~~~~gt~~y~ 151 (424)
+.. ...+++..+..++.|++.||.|||+++ |+||||||+|||++.++.+||+|||+++..... ....||+.|+
T Consensus 84 l~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~-i~HrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~ 160 (312)
T cd05585 84 LQR--EGRFDLSRARFYTAELLCALENLHKFN-VIYRDLKPENILLDYQGHIALCDFGLCKLNMKDDDKTNTFCGTPEYL 160 (312)
T ss_pred HHh--cCCCCHHHHHHHHHHHHHHHHHHHhCC-eEeCCCCHHHeEECCCCcEEEEECcccccCccCCCccccccCCcccC
Confidence 964 457899999999999999999999999 999999999999999999999999998754322 2346899999
Q ss_pred CccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHHHHHHHHHhcccCcCC
Q 014478 152 PPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARE 231 (424)
Q Consensus 152 aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~ 231 (424)
|||++.+..++.++|||||||++|+|++|..||......... ..... .....+..+++++.+++.+||..||.+
T Consensus 161 aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~~~~~~----~~~~~--~~~~~~~~~~~~~~~li~~~L~~dp~~ 234 (312)
T cd05585 161 APELLLGHGYTKAVDWWTLGVLLYEMLTGLPPFYDENVNEMY----RKILQ--EPLRFPDGFDRDAKDLLIGLLSRDPTR 234 (312)
T ss_pred CHHHHcCCCCCCccceechhHHHHHHHhCCCCcCCCCHHHHH----HHHHc--CCCCCCCcCCHHHHHHHHHHcCCCHHH
Confidence 999999888999999999999999999999888754222111 11111 122345667889999999999999999
Q ss_pred CCC---HHHHHHH
Q 014478 232 RPN---AKSLVIS 241 (424)
Q Consensus 232 Rps---~~~~~~~ 241 (424)
||+ +.+++.+
T Consensus 235 R~~~~~~~e~l~h 247 (312)
T cd05585 235 RLGYNGAQEIKNH 247 (312)
T ss_pred cCCCCCHHHHHcC
Confidence 975 5666654
|
Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl |
| >KOG0589 consensus Serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.8e-42 Score=317.69 Aligned_cols=234 Identities=17% Similarity=0.177 Sum_probs=198.7
Q ss_pred CCCcccceeeee--cceecccccC---CCchhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCe-eeEEEecCCCCCHHhH
Q 014478 2 GGRCSKFSICWF--HCHLKSSVLE---SSDLGETLNLEEAKAVGNLRSERLANLIGCCYEADE-RLLVAEFMPNETLAKH 75 (424)
Q Consensus 2 G~~g~v~~~~~~--~~~v~~~~~~---~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~-~~lv~e~~~~gsL~~~ 75 (424)
|+||.++..... +..++.|.+. .....+....+|+.++++++|||||.+.+.|..++. .+|||+||+||+|.+.
T Consensus 15 GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~~r~~A~~E~~lis~~~hP~iv~y~ds~~~~~~~l~Ivm~Y~eGg~l~~~ 94 (426)
T KOG0589|consen 15 GAFGSALLVRHKSDDKLYVLKKINLEKLTEPERRSAIQEMDLLSKLLHPNIVEYKDSFEEDGQLLCIVMEYCEGGDLAQL 94 (426)
T ss_pred cccchhhhhhhccCCceEEEEEEeccccCchhhHHHHHHHHHHHhccCCCeeeeccchhcCCceEEEEEeecCCCCHHHH
Confidence 888988877663 3334444442 223345577899999999999999999999999888 8999999999999999
Q ss_pred hccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCC----CccccCccCC
Q 014478 76 LFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG----KSYSTNLAFT 151 (424)
Q Consensus 76 l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~----~~~~gt~~y~ 151 (424)
+.+..+..+++..+++|+.|++.|+.|||+++ |+|||||+.|||++.++.|||+|||+++..... .+..||+.||
T Consensus 95 i~~~k~~~f~E~~i~~~~~Q~~~av~ylH~~~-iLHRDlK~~Nifltk~~~VkLgDfGlaK~l~~~~~~a~tvvGTp~Ym 173 (426)
T KOG0589|consen 95 IKEQKGVLFPEERILKWFVQILLAVNYLHENR-VLHRDLKCANIFLTKDKKVKLGDFGLAKILNPEDSLASTVVGTPYYM 173 (426)
T ss_pred HHHHhhccccHHHHHHHHHHHHHHHHHHHhhh-hhcccchhhhhhccccCceeecchhhhhhcCCchhhhheecCCCccc
Confidence 98756678999999999999999999999988 999999999999999999999999999987755 3568999999
Q ss_pred CccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHHHHHHHHHhcccCcCC
Q 014478 152 PPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARE 231 (424)
Q Consensus 152 aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~ 231 (424)
+||.+.+.+|+.|+|||||||++|||++-+.+|.......... .+......+.|...+.+++.+|..||..+|..
T Consensus 174 cPEil~d~pYn~KSDiWsLGC~~yEm~~lk~aF~a~~m~~Li~-----ki~~~~~~Plp~~ys~el~~lv~~~l~~~P~~ 248 (426)
T KOG0589|consen 174 CPEILSDIPYNEKSDIWSLGCCLYEMCTLKPAFKASNMSELIL-----KINRGLYSPLPSMYSSELRSLVKSMLRKNPEH 248 (426)
T ss_pred CHHHhCCCCCCccCcchhhcchHHHHHhcccccCccchHHHHH-----HHhhccCCCCCccccHHHHHHHHHHhhcCCcc
Confidence 9999999999999999999999999999998887643322222 22233345677888999999999999999999
Q ss_pred CCCHHHHHHH
Q 014478 232 RPNAKSLVIS 241 (424)
Q Consensus 232 Rps~~~~~~~ 241 (424)
||++.+++.+
T Consensus 249 RPsa~~LL~~ 258 (426)
T KOG0589|consen 249 RPSALELLRR 258 (426)
T ss_pred CCCHHHHhhC
Confidence 9999999986
|
|
| >cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.3e-41 Score=313.31 Aligned_cols=240 Identities=20% Similarity=0.256 Sum_probs=187.3
Q ss_pred CCCcccceeeeec------------------ceecccccCCC--chhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeee
Q 014478 2 GGRCSKFSICWFH------------------CHLKSSVLESS--DLGETLNLEEAKAVGNLRSERLANLIGCCYEADERL 61 (424)
Q Consensus 2 G~~g~v~~~~~~~------------------~~v~~~~~~~~--~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 61 (424)
||||.||.+.+.. ..+++|++... ......|.+|++++.+++||||+++++++...+..+
T Consensus 16 G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 95 (304)
T cd05096 16 GQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANKNARNDFLKEVKILSRLKDPNIIRLLGVCVDEDPLC 95 (304)
T ss_pred cCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEecCCceE
Confidence 8999999987632 23677766543 234567999999999999999999999999999999
Q ss_pred EEEecCCCCCHHhHhccCC-----------------CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCC
Q 014478 62 LVAEFMPNETLAKHLFHWE-----------------TQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKD 124 (424)
Q Consensus 62 lv~e~~~~gsL~~~l~~~~-----------------~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~ 124 (424)
+||||+++|+|.+++.... ...+++.++++++.||+.||.|||+.+ ++||||||+|||++.+
T Consensus 96 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~-ivH~dlkp~Nill~~~ 174 (304)
T cd05096 96 MITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSSLN-FVHRDLATRNCLVGEN 174 (304)
T ss_pred EEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHCC-ccccCcchhheEEcCC
Confidence 9999999999999885321 124678899999999999999999999 9999999999999999
Q ss_pred CCeEEccccccccCCCCC------ccccCccCCCccccccCCCCCCcceehhHHHHHHHhhCC--CCCCchhhHHHhhhh
Q 014478 125 GNPRLSSFGLMKNSRDGK------SYSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGK--HIPPSHALDLIRSKN 196 (424)
Q Consensus 125 ~~~kl~Dfg~~~~~~~~~------~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~--~~~~~~~~~~~~~~~ 196 (424)
+.+||+|||+++...... ...++..|||||++.++.++.++|||||||++|||+++. .|+...........
T Consensus 175 ~~~kl~DfG~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p~~~~~~~~~~~~- 253 (304)
T cd05096 175 LTIKIADFGMSRNLYAGDYYRIQGRAVLPIRWMAWECILMGKFTTASDVWAFGVTLWEILMLCKEQPYGELTDEQVIEN- 253 (304)
T ss_pred ccEEECCCccceecccCceeEecCcCCCCccccCHHHHhcCCCCchhhhHHHHHHHHHHHHccCCCCCCcCCHHHHHHH-
Confidence 999999999988654321 233477899999999888999999999999999998754 34433211111110
Q ss_pred hhHhhh---cccCCCCCchhHHHHHHHHHHhcccCcCCCCCHHHHHHHHH
Q 014478 197 FLLLMD---SALEGHFSNDEGTELVRLASRCLQSEARERPNAKSLVISLM 243 (424)
Q Consensus 197 ~~~~~~---~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~~~~~l~ 243 (424)
...... .......+..++..+.+++.+||..||++|||+.+|.+.|+
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~RPs~~~i~~~l~ 303 (304)
T cd05096 254 AGEFFRDQGRQVYLFRPPPCPQGLYELMLQCWSRDCRERPSFSDIHAFLT 303 (304)
T ss_pred HHHHhhhccccccccCCCCCCHHHHHHHHHHccCCchhCcCHHHHHHHHh
Confidence 101111 11112234567789999999999999999999999988775
|
Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k |
| >PTZ00263 protein kinase A catalytic subunit; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-41 Score=320.68 Aligned_cols=231 Identities=16% Similarity=0.168 Sum_probs=193.1
Q ss_pred CCCcccceeee--ecceecccccCCCc----hhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHhH
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESSD----LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKH 75 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~~----~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~ 75 (424)
|++|.||.+.+ .+..+++|++.... ...+.+.+|+.++++++||||+++++++..++..++||||++||+|.++
T Consensus 29 G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~ 108 (329)
T PTZ00263 29 GSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFIVNMMCSFQDENRVYFLLEFVVGGELFTH 108 (329)
T ss_pred cCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCcEEEEEEcCCEEEEEEcCCCCChHHHH
Confidence 89999999988 45667888775432 2345788999999999999999999999999999999999999999999
Q ss_pred hccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCC-CccccCccCCCcc
Q 014478 76 LFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG-KSYSTNLAFTPPE 154 (424)
Q Consensus 76 l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~-~~~~gt~~y~aPE 154 (424)
+.. ...+++..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++..... ....||+.|+|||
T Consensus 109 l~~--~~~~~~~~~~~~~~qi~~aL~~LH~~~-ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~gt~~y~aPE 185 (329)
T PTZ00263 109 LRK--AGRFPNDVAKFYHAELVLAFEYLHSKD-IIYRDLKPENLLLDNKGHVKVTDFGFAKKVPDRTFTLCGTPEYLAPE 185 (329)
T ss_pred HHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-eeecCCCHHHEEECCCCCEEEeeccCceEcCCCcceecCChhhcCHH
Confidence 965 457899999999999999999999999 999999999999999999999999999876543 3457899999999
Q ss_pred ccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHHHHHHHHHhcccCcCCCCC
Q 014478 155 YMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERPN 234 (424)
Q Consensus 155 ~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps 234 (424)
++.+..++.++|||||||++|+|++|..||....... ....+... ....+..++.++.++|.+||+.||.+||+
T Consensus 186 ~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~----~~~~i~~~--~~~~p~~~~~~~~~li~~~L~~dP~~R~~ 259 (329)
T PTZ00263 186 VIQSKGHGKAVDWWTMGVLLYEFIAGYPPFFDDTPFR----IYEKILAG--RLKFPNWFDGRARDLVKGLLQTDHTKRLG 259 (329)
T ss_pred HHcCCCCCCcceeechHHHHHHHHcCCCCCCCCCHHH----HHHHHhcC--CcCCCCCCCHHHHHHHHHHhhcCHHHcCC
Confidence 9998889999999999999999999998886542111 11111111 12345556788999999999999999986
Q ss_pred -----HHHHHHH
Q 014478 235 -----AKSLVIS 241 (424)
Q Consensus 235 -----~~~~~~~ 241 (424)
+++++.+
T Consensus 260 ~~~~~~~~ll~h 271 (329)
T PTZ00263 260 TLKGGVADVKNH 271 (329)
T ss_pred CCCCCHHHHhcC
Confidence 6888766
|
|
| >KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-41 Score=311.32 Aligned_cols=234 Identities=20% Similarity=0.232 Sum_probs=187.8
Q ss_pred CCCcccceeee--ecceecccccCCCc---hhhhHHHHHHHHHhcCCCcCcceeEEEEEeC--CeeeEEEecCCCCCHHh
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESSD---LGETLNLEEAKAVGNLRSERLANLIGCCYEA--DERLLVAEFMPNETLAK 74 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~~---~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~--~~~~lv~e~~~~gsL~~ 74 (424)
|.||.||++.. .+..||.|++.-+. .......+||.+|++|.||||+++.+..... ..+|||+|||+. +|.-
T Consensus 128 GTyg~VYkAr~~~tgkivALKKvr~d~~~~~~~~t~~REI~ILr~l~HpNIikL~eivt~~~~~siYlVFeYMdh-DL~G 206 (560)
T KOG0600|consen 128 GTYGQVYKARDLETGKIVALKKVRFDNEKEGFPITAIREIKILRRLDHPNIIKLEEIVTSKLSGSIYLVFEYMDH-DLSG 206 (560)
T ss_pred cchhheeEeeecccCcEEEEEEeecccCCCcchHHHHHHHHHHHhcCCCcccceeeEEEecCCceEEEEEecccc-hhhh
Confidence 78999999988 55668888775444 2244566899999999999999999999876 679999999988 9999
Q ss_pred HhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCC-----CccccCcc
Q 014478 75 HLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG-----KSYSTNLA 149 (424)
Q Consensus 75 ~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~-----~~~~gt~~ 149 (424)
++.. .+-.|++.++..+++|++.||+|||++| |+|||||.+|||||.+|.+||+|||+|++.... +..+-|..
T Consensus 207 Ll~~-p~vkft~~qIKc~mkQLl~Gl~~cH~~g-vlHRDIK~SNiLidn~G~LKiaDFGLAr~y~~~~~~~~T~rVvTLW 284 (560)
T KOG0600|consen 207 LLSS-PGVKFTEPQIKCYMKQLLEGLEYCHSRG-VLHRDIKGSNILIDNNGVLKIADFGLARFYTPSGSAPYTSRVVTLW 284 (560)
T ss_pred hhcC-CCcccChHHHHHHHHHHHHHHHHHhhcC-eeeccccccceEEcCCCCEEeccccceeeccCCCCcccccceEEee
Confidence 8864 4568999999999999999999999999 999999999999999999999999999976543 33456899
Q ss_pred CCCccccccC-CCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhh-hhHhhhc-----c----------cCC--CC-
Q 014478 150 FTPPEYMRTG-RVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKN-FLLLMDS-----A----------LEG--HF- 209 (424)
Q Consensus 150 y~aPE~~~~~-~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~-~~~~~~~-----~----------~~~--~~- 209 (424)
|.|||.+.|. .|+...|+||.|||+.||++|++++++.. +++... +..+... + ... ..
T Consensus 285 YRpPELLLG~t~Yg~aVDlWS~GCIl~El~~gkPI~~G~t--EveQl~kIfklcGSP~e~~W~~~kLP~~~~~kp~~~y~ 362 (560)
T KOG0600|consen 285 YRPPELLLGATSYGTAVDLWSVGCILAELFLGKPILQGRT--EVEQLHKIFKLCGSPTEDYWPVSKLPHATIFKPQQPYK 362 (560)
T ss_pred ccChHHhcCCcccccceeehhhhHHHHHHHcCCCCcCCcc--HHHHHHHHHHHhCCCChhccccccCCcccccCCCCccc
Confidence 9999999976 49999999999999999999998887641 111111 1110000 0 000 00
Q ss_pred ------CchhHHHHHHHHHHhcccCcCCCCCHHHHHH
Q 014478 210 ------SNDEGTELVRLASRCLQSEARERPNAKSLVI 240 (424)
Q Consensus 210 ------~~~~~~~l~~li~~cl~~dp~~Rps~~~~~~ 240 (424)
-...++...+|+..+|..||.+|.|+.+++.
T Consensus 363 r~l~E~~~~~~~~~l~Ll~~lL~ldP~kR~tA~~aL~ 399 (560)
T KOG0600|consen 363 RRLRETFKDFPASALDLLEKLLSLDPDKRGTASSALQ 399 (560)
T ss_pred chHHHHhccCCHHHHHHHHHHhccCccccccHHHHhc
Confidence 0134667889999999999999999999874
|
|
| >cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-41 Score=318.48 Aligned_cols=231 Identities=18% Similarity=0.234 Sum_probs=193.0
Q ss_pred CCCcccceeee--ecceecccccCCC----chhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHhH
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESS----DLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKH 75 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~----~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~ 75 (424)
|+||.||.+.. .+..+++|++... ......+.+|+++++.++||||+++++++..++..++||||+++|+|.++
T Consensus 6 G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~Ey~~~g~L~~~ 85 (328)
T cd05593 6 GTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFLTSLKYSFQTKDRLCFVMEYVNGGELFFH 85 (328)
T ss_pred CCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCEEEEEEeCCCCCCHHHH
Confidence 89999998876 5677888877543 23356788899999999999999999999999999999999999999998
Q ss_pred hccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCC----CccccCccCC
Q 014478 76 LFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG----KSYSTNLAFT 151 (424)
Q Consensus 76 l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~----~~~~gt~~y~ 151 (424)
+.. ...+++.++..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++..... ....||+.|+
T Consensus 86 l~~--~~~l~~~~~~~~~~qi~~aL~~LH~~~-ivHrDikp~NIll~~~~~~kL~DfG~~~~~~~~~~~~~~~~gt~~y~ 162 (328)
T cd05593 86 LSR--ERVFSEDRTRFYGAEIVSALDYLHSGK-IVYRDLKLENLMLDKDGHIKITDFGLCKEGITDAATMKTFCGTPEYL 162 (328)
T ss_pred HHh--cCCCCHHHHHHHHHHHHHHHHHHHhCC-eEecccCHHHeEECCCCcEEEecCcCCccCCCcccccccccCCcCcc
Confidence 864 457899999999999999999999999 999999999999999999999999998753321 2346899999
Q ss_pred CccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHHHHHHHHHhcccCcCC
Q 014478 152 PPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARE 231 (424)
Q Consensus 152 aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~ 231 (424)
|||++.+..++.++|||||||++|+|++|+.||.......... .... .....+..+++++.++|.+||..||++
T Consensus 163 aPE~~~~~~~~~~~DiwslGvil~elltG~~Pf~~~~~~~~~~----~~~~--~~~~~p~~~~~~~~~li~~~L~~dP~~ 236 (328)
T cd05593 163 APEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFE----LILM--EDIKFPRTLSADAKSLLSGLLIKDPNK 236 (328)
T ss_pred ChhhhcCCCCCccCCccccchHHHHHhhCCCCCCCCCHHHHHH----Hhcc--CCccCCCCCCHHHHHHHHHHcCCCHHH
Confidence 9999998889999999999999999999998886542211111 1111 112345667889999999999999999
Q ss_pred CC-----CHHHHHHH
Q 014478 232 RP-----NAKSLVIS 241 (424)
Q Consensus 232 Rp-----s~~~~~~~ 241 (424)
|| ++.+++++
T Consensus 237 R~~~~~~~~~~il~h 251 (328)
T cd05593 237 RLGGGPDDAKEIMRH 251 (328)
T ss_pred cCCCCCCCHHHHhcC
Confidence 97 89999876
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate |
| >cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.4e-41 Score=305.16 Aligned_cols=237 Identities=20% Similarity=0.285 Sum_probs=196.5
Q ss_pred CCCcccceeee-ecceecccccCCCchhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHhHhccCC
Q 014478 2 GGRCSKFSICW-FHCHLKSSVLESSDLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWE 80 (424)
Q Consensus 2 G~~g~v~~~~~-~~~~v~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~ 80 (424)
|++|.||.+.+ .+..+++|.+.......+.+.+|+.+++.++|+||+++++.+...+..+++|||+++|+|.+++....
T Consensus 17 g~~g~v~~~~~~~~~~v~iK~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~ 96 (261)
T cd05072 17 GQFGEVWMGYYNNSTKVAVKTLKPGTMSVQAFLEEANLMKTLQHDKLVRLYAVVTKEEPIYIITEYMAKGSLLDFLKSDE 96 (261)
T ss_pred cCCceEEEEEecCCceEEEEEccCCchhHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCcEEEEecCCCCcHHHHHHHhc
Confidence 89999999887 34557777776666667789999999999999999999999999999999999999999999997545
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCCC-----ccccCccCCCccc
Q 014478 81 TQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGK-----SYSTNLAFTPPEY 155 (424)
Q Consensus 81 ~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~~-----~~~gt~~y~aPE~ 155 (424)
...+++.+++.++.|++.||.|||+.+ ++||||||+||+++.++.++|+|||+++...... ...++..|+|||+
T Consensus 97 ~~~~~~~~~~~~~~~l~~~l~~LH~~~-i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~ 175 (261)
T cd05072 97 GGKVLLPKLIDFSAQIAEGMAYIERKN-YIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEA 175 (261)
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHCC-eeccccchhhEEecCCCcEEECCCccceecCCCceeccCCCccceecCCHHH
Confidence 567899999999999999999999999 9999999999999999999999999998654322 2234668999999
Q ss_pred cccCCCCCCcceehhHHHHHHHhh-CCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHHHHHHHHHhcccCcCCCCC
Q 014478 156 MRTGRVTPESVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERPN 234 (424)
Q Consensus 156 ~~~~~~~~~~Dv~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps 234 (424)
+.++.++.++|||||||++|+|++ |..||+...... ....+...........++.++.+++.+||..+|++|||
T Consensus 176 ~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~ 250 (261)
T cd05072 176 INFGSFTIKSDVWSFGILLYEIVTYGKIPYPGMSNSD-----VMSALQRGYRMPRMENCPDELYDIMKTCWKEKAEERPT 250 (261)
T ss_pred hccCCCChhhhhhhhHHHHHHHHccCCCCCCCCCHHH-----HHHHHHcCCCCCCCCCCCHHHHHHHHHHccCCcccCcC
Confidence 998889999999999999999998 887776532111 11111222222334456789999999999999999999
Q ss_pred HHHHHHHHHH
Q 014478 235 AKSLVISLMS 244 (424)
Q Consensus 235 ~~~~~~~l~~ 244 (424)
++++.+.|+.
T Consensus 251 ~~~i~~~l~~ 260 (261)
T cd05072 251 FDYLQSVLDD 260 (261)
T ss_pred HHHHHHHHhc
Confidence 9999998865
|
Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa |
| >cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-41 Score=316.12 Aligned_cols=232 Identities=18% Similarity=0.187 Sum_probs=194.0
Q ss_pred CCCcccceeeee--cceecccccCCCc----hhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHhH
Q 014478 2 GGRCSKFSICWF--HCHLKSSVLESSD----LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKH 75 (424)
Q Consensus 2 G~~g~v~~~~~~--~~~v~~~~~~~~~----~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~ 75 (424)
|++|.||.+.+. +..+++|++.... .....+.+|+.+++.++||||+++++++.++...++||||+++|+|.++
T Consensus 12 G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~ 91 (291)
T cd05612 12 GTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFIIRLFWTEHDQRFLYMLMEYVPGGELFSY 91 (291)
T ss_pred CCCeEEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCCCcHhhhHhhhccCCeEEEEEeCCCCCCHHHH
Confidence 899999999884 6778888775432 2345688999999999999999999999999999999999999999999
Q ss_pred hccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCC-CccccCccCCCcc
Q 014478 76 LFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG-KSYSTNLAFTPPE 154 (424)
Q Consensus 76 l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~-~~~~gt~~y~aPE 154 (424)
+.. .+.+++..+..++.|++.||.|||+++ ++||||||+|||++.++.+||+|||+++..... ....||+.|+|||
T Consensus 92 ~~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~-i~H~dlkp~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~gt~~y~aPE 168 (291)
T cd05612 92 LRN--SGRFSNSTGLFYASEIVCALEYLHSKE-IVYRDLKPENILLDKEGHIKLTDFGFAKKLRDRTWTLCGTPEYLAPE 168 (291)
T ss_pred HHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-eeecCCCHHHeEECCCCCEEEEecCcchhccCCcccccCChhhcCHH
Confidence 964 457899999999999999999999999 999999999999999999999999998865543 3456899999999
Q ss_pred ccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHHHHHHHHHhcccCcCCCCC
Q 014478 155 YMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERPN 234 (424)
Q Consensus 155 ~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps 234 (424)
++.+..++.++|||||||++|+|++|..||........ ....... ...++...++.+.++|.+||+.||.+||+
T Consensus 169 ~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~----~~~i~~~--~~~~~~~~~~~~~~li~~~l~~dp~~R~~ 242 (291)
T cd05612 169 VIQSKGHNKAVDWWALGILIYEMLVGYPPFFDDNPFGI----YEKILAG--KLEFPRHLDLYAKDLIKKLLVVDRTRRLG 242 (291)
T ss_pred HHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH----HHHHHhC--CcCCCccCCHHHHHHHHHHcCCCHHHccC
Confidence 99988899999999999999999999988765422111 1111111 12345556789999999999999999995
Q ss_pred -----HHHHHHHH
Q 014478 235 -----AKSLVISL 242 (424)
Q Consensus 235 -----~~~~~~~l 242 (424)
+++++.+-
T Consensus 243 ~~~~~~~~~l~h~ 255 (291)
T cd05612 243 NMKNGADDVKNHR 255 (291)
T ss_pred CccCCHHHHhcCc
Confidence 88888764
|
Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt |
| >cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-41 Score=318.11 Aligned_cols=231 Identities=19% Similarity=0.257 Sum_probs=192.0
Q ss_pred CCCcccceeee--ecceecccccCCC----chhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHhH
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESS----DLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKH 75 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~----~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~ 75 (424)
|+||.||.+.. .+..+++|++... ......+.+|+++++.++||||+++++++..++..++||||+++|+|..+
T Consensus 6 G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i~~~~~~~~~~~~~~lv~E~~~~~~L~~~ 85 (323)
T cd05595 6 GTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFH 85 (323)
T ss_pred CCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCcceeeEEecCCEEEEEEeCCCCCcHHHH
Confidence 89999998876 5667787877543 22345677899999999999999999999999999999999999999998
Q ss_pred hccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCC----CccccCccCC
Q 014478 76 LFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG----KSYSTNLAFT 151 (424)
Q Consensus 76 l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~----~~~~gt~~y~ 151 (424)
+.. ...+++..+..++.||+.||.|||+++ ++||||||+|||++.++.+||+|||+++..... ....||+.|+
T Consensus 86 l~~--~~~~~~~~~~~~~~qi~~aL~~LH~~~-ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~gt~~y~ 162 (323)
T cd05595 86 LSR--ERVFTEERARFYGAEIVSALEYLHSRD-VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYL 162 (323)
T ss_pred HHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-eEecCCCHHHEEEcCCCCEEecccHHhccccCCCCccccccCCcCcC
Confidence 864 457899999999999999999999999 999999999999999999999999998753221 2346899999
Q ss_pred CccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHHHHHHHHHhcccCcCC
Q 014478 152 PPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARE 231 (424)
Q Consensus 152 aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~ 231 (424)
|||++.+..++.++|||||||++|||++|+.||........ ....... ....+..+++++.++|.+||..||.+
T Consensus 163 aPE~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~----~~~~~~~--~~~~p~~~~~~~~~li~~~L~~dP~~ 236 (323)
T cd05595 163 APEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERL----FELILME--EIRFPRTLSPEAKSLLAGLLKKDPKQ 236 (323)
T ss_pred CcccccCCCCCchhchhhhHHHHHHHHhCCCCCCCCCHHHH----HHHHhcC--CCCCCCCCCHHHHHHHHHHccCCHHH
Confidence 99999988899999999999999999999988765322111 1111111 12345667889999999999999999
Q ss_pred CC-----CHHHHHHH
Q 014478 232 RP-----NAKSLVIS 241 (424)
Q Consensus 232 Rp-----s~~~~~~~ 241 (424)
|| ++.+++++
T Consensus 237 R~~~~~~~~~~~l~h 251 (323)
T cd05595 237 RLGGGPSDAKEVMEH 251 (323)
T ss_pred hCCCCCCCHHHHHcC
Confidence 98 88888875
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in |
| >KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.9e-42 Score=318.98 Aligned_cols=234 Identities=18% Similarity=0.202 Sum_probs=199.2
Q ss_pred CCCcccceeee--ecceecccccCCCc----hhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHhH
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESSD----LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKH 75 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~~----~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~ 75 (424)
|+||.||.+.+ ++..|++|++..+. ....+++.|++.|++|+|||++.+-|+|......|||||||-| |-.|+
T Consensus 37 GSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~HPntieYkgCyLre~TaWLVMEYClG-SAsDl 115 (948)
T KOG0577|consen 37 GSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLRHPNTIEYKGCYLREHTAWLVMEYCLG-SASDL 115 (948)
T ss_pred CccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhccCCCcccccceeeccchHHHHHHHHhc-cHHHH
Confidence 89999999987 66778998885433 4456899999999999999999999999999999999999965 77777
Q ss_pred hccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCCCccccCccCCCccc
Q 014478 76 LFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLAFTPPEY 155 (424)
Q Consensus 76 l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~gt~~y~aPE~ 155 (424)
+.- -..++.+.++..|+.+.+.||.|||+.+ .||||||..|||+++.|.|||+|||.+....+..++.||+.|||||+
T Consensus 116 leV-hkKplqEvEIAAi~~gaL~gLaYLHS~~-~IHRDiKAGNILLse~g~VKLaDFGSAsi~~PAnsFvGTPywMAPEV 193 (948)
T KOG0577|consen 116 LEV-HKKPLQEVEIAAITHGALQGLAYLHSHN-RIHRDIKAGNILLSEPGLVKLADFGSASIMAPANSFVGTPYWMAPEV 193 (948)
T ss_pred HHH-HhccchHHHHHHHHHHHHHHHHHHHHhh-HHhhhccccceEecCCCeeeeccccchhhcCchhcccCCccccchhH
Confidence 642 3578999999999999999999999999 99999999999999999999999999999999999999999999999
Q ss_pred cc---cCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHHHHHHHHHhcccCcCCC
Q 014478 156 MR---TGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARER 232 (424)
Q Consensus 156 ~~---~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~R 232 (424)
+. .|.|+-++|||||||++.||.-.++|..+.. .+ -.+..+.....+--..+.++..+++|+..||++-|.+|
T Consensus 194 ILAMDEGqYdgkvDvWSLGITCIELAERkPPlFnMN--AM--SALYHIAQNesPtLqs~eWS~~F~~Fvd~CLqKipqeR 269 (948)
T KOG0577|consen 194 ILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMN--AM--SALYHIAQNESPTLQSNEWSDYFRNFVDSCLQKIPQER 269 (948)
T ss_pred heeccccccCCccceeeccchhhhhhhcCCCccCch--HH--HHHHHHHhcCCCCCCCchhHHHHHHHHHHHHhhCcccC
Confidence 86 4679999999999999999999997665531 11 11222222333333366789999999999999999999
Q ss_pred CCHHHHHHHH
Q 014478 233 PNAKSLVISL 242 (424)
Q Consensus 233 ps~~~~~~~l 242 (424)
||.++++.+-
T Consensus 270 ptse~ll~H~ 279 (948)
T KOG0577|consen 270 PTSEELLKHR 279 (948)
T ss_pred CcHHHHhhcc
Confidence 9999988763
|
|
| >cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-40 Score=302.84 Aligned_cols=234 Identities=20% Similarity=0.309 Sum_probs=191.4
Q ss_pred CCCcccceeeeec-ceecccccCCCchhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHhHhccCC
Q 014478 2 GGRCSKFSICWFH-CHLKSSVLESSDLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWE 80 (424)
Q Consensus 2 G~~g~v~~~~~~~-~~v~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~ 80 (424)
|++|.||.+.+.. ..+++|.+.........|.+|+.++++++||||+++++++..+...++||||+++|+|.+++...
T Consensus 15 G~~~~vy~~~~~~~~~~a~K~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv~e~~~~~~L~~~~~~~- 93 (256)
T cd05114 15 GQFGVVHLGKWRAQIKVAIKAINEGAMSEEDFIEEAKVMMKLSHPKLVQLYGVCTQQKPLYIVTEFMENGCLLNYLRQR- 93 (256)
T ss_pred CcCceEEEEEeccCceEEEEecccCCccHHHHHHHHHHHHHCCCCCceeEEEEEccCCCEEEEEEcCCCCcHHHHHHhC-
Confidence 8999999998844 36677766655555678999999999999999999999999999999999999999999998642
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCCC-----ccccCccCCCccc
Q 014478 81 TQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGK-----SYSTNLAFTPPEY 155 (424)
Q Consensus 81 ~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~~-----~~~gt~~y~aPE~ 155 (424)
...+++..+..++.|++.||.|||+++ ++||||||+||+++.++.+||+|||+++...... ...++..|+|||+
T Consensus 94 ~~~~~~~~~~~~~~~i~~~l~~lH~~~-i~H~dl~p~ni~i~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~y~aPE~ 172 (256)
T cd05114 94 QGKLSKDMLLSMCQDVCEGMEYLERNS-FIHRDLAARNCLVSSTGVVKVSDFGMTRYVLDDEYTSSSGAKFPVKWSPPEV 172 (256)
T ss_pred ccCCCHHHHHHHHHHHHHHHHHHHHCC-ccccccCcceEEEcCCCeEEECCCCCccccCCCceeccCCCCCchhhCChhh
Confidence 346899999999999999999999999 9999999999999999999999999987654322 1234568999999
Q ss_pred cccCCCCCCcceehhHHHHHHHhh-CCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHHHHHHHHHhcccCcCCCCC
Q 014478 156 MRTGRVTPESVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERPN 234 (424)
Q Consensus 156 ~~~~~~~~~~Dv~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps 234 (424)
+.+..++.++||||||+++|+|++ |+.||...... .....+........+...+.++.+++.+||..||++|||
T Consensus 173 ~~~~~~~~~~Di~s~G~~l~el~~~g~~p~~~~~~~-----~~~~~i~~~~~~~~~~~~~~~~~~li~~c~~~~p~~Rps 247 (256)
T cd05114 173 FNFSKYSSKSDVWSFGVLMWEVFTEGKMPFEKKSNY-----EVVEMISRGFRLYRPKLASMTVYEVMYSCWHEKPEGRPT 247 (256)
T ss_pred cccCccchhhhhHHHHHHHHHHHcCCCCCCCCCCHH-----HHHHHHHCCCCCCCCCCCCHHHHHHHHHHccCCcccCcC
Confidence 988889999999999999999999 77776543111 111111111222234455778999999999999999999
Q ss_pred HHHHHHHH
Q 014478 235 AKSLVISL 242 (424)
Q Consensus 235 ~~~~~~~l 242 (424)
+.++++.|
T Consensus 248 ~~~l~~~l 255 (256)
T cd05114 248 FAELLRAI 255 (256)
T ss_pred HHHHHHhh
Confidence 99998765
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h |
| >KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-41 Score=319.76 Aligned_cols=233 Identities=16% Similarity=0.191 Sum_probs=198.1
Q ss_pred CCCcccceeee--ecceecccccCCC-c---hhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHhH
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESS-D---LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKH 75 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~-~---~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~ 75 (424)
|+.|.|-.+.. +|...++|++.+. . .....+.+|+-+|+-+.||||+++|+++++..++|+|.||++||.|.++
T Consensus 23 Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~HpnVl~LydVwe~~~~lylvlEyv~gGELFdy 102 (786)
T KOG0588|consen 23 GSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIEHPNVLRLYDVWENKQHLYLVLEYVPGGELFDY 102 (786)
T ss_pred CCCceehhhhcccccceeEEEeeccccccccccccchhhhhHHHHHhcCCCeeeeeeeeccCceEEEEEEecCCchhHHH
Confidence 66677766654 7777788877544 1 2245677899999999999999999999999999999999999999999
Q ss_pred hccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCC---CccccCccCCC
Q 014478 76 LFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG---KSYSTNLAFTP 152 (424)
Q Consensus 76 l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~---~~~~gt~~y~a 152 (424)
+.. ++++++.++.+++.||+.|+.|+|..+ |+|||+||+|+|+|..+++||+|||.|....++ ++.+|++.|.+
T Consensus 103 lv~--kG~l~e~eaa~ff~QIi~gv~yCH~~~-icHRDLKpENlLLd~~~nIKIADFGMAsLe~~gklLeTSCGSPHYA~ 179 (786)
T KOG0588|consen 103 LVR--KGPLPEREAAHFFRQILDGVSYCHAFN-ICHRDLKPENLLLDVKNNIKIADFGMASLEVPGKLLETSCGSPHYAA 179 (786)
T ss_pred HHh--hCCCCCHHHHHHHHHHHHHHHHHhhhc-ceeccCCchhhhhhcccCEeeeccceeecccCCccccccCCCcccCC
Confidence 975 788999999999999999999999999 999999999999999999999999999876555 46789999999
Q ss_pred ccccccCCC-CCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHHHHHHHHHhcccCcCC
Q 014478 153 PEYMRTGRV-TPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARE 231 (424)
Q Consensus 153 PE~~~~~~~-~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~ 231 (424)
||++.|.+| +.++||||.||+||-|+||+.||..+..... ..++.. -...+|..++++..+||.+||..||++
T Consensus 180 PEIV~G~pYdG~~sDVWSCGVILfALLtG~LPFdDdNir~L----LlKV~~--G~f~MPs~Is~eaQdLLr~ml~VDp~~ 253 (786)
T KOG0588|consen 180 PEIVSGRPYDGRPSDVWSCGVILFALLTGKLPFDDDNIRVL----LLKVQR--GVFEMPSNISSEAQDLLRRMLDVDPST 253 (786)
T ss_pred chhhcCCCCCCCccccchhHHHHHHHHhCCCCCCCccHHHH----HHHHHc--CcccCCCcCCHHHHHHHHHHhccCccc
Confidence 999999998 5699999999999999999999986532211 111111 123467888999999999999999999
Q ss_pred CCCHHHHHHHHH
Q 014478 232 RPNAKSLVISLM 243 (424)
Q Consensus 232 Rps~~~~~~~l~ 243 (424)
|.|+++|++|..
T Consensus 254 RiT~~eI~kHP~ 265 (786)
T KOG0588|consen 254 RITTEEILKHPF 265 (786)
T ss_pred cccHHHHhhCch
Confidence 999999998854
|
|
| >PTZ00267 NIMA-related protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.4e-41 Score=330.66 Aligned_cols=234 Identities=17% Similarity=0.189 Sum_probs=191.0
Q ss_pred CCCcccceeeee---cceecccccCCCc-hhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHhHhc
Q 014478 2 GGRCSKFSICWF---HCHLKSSVLESSD-LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLF 77 (424)
Q Consensus 2 G~~g~v~~~~~~---~~~v~~~~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~ 77 (424)
|++|.||.+... +..+++|++.... .....+.+|+.+|..++||||++++++|..++..+|||||++||+|.+++.
T Consensus 78 G~~g~vy~a~~~~~~~~~vv~K~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~E~~~gg~L~~~l~ 157 (478)
T PTZ00267 78 NPTTAAFVATRGSDPKEKVVAKFVMLNDERQAAYARSELHCLAACDHFGIVKHFDDFKSDDKLLLIMEYGSGGDLNKQIK 157 (478)
T ss_pred CCCcEEEEEEEcCCCCeEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEECCEEEEEEECCCCCCHHHHHH
Confidence 899999998863 3445555543333 334567889999999999999999999999999999999999999998875
Q ss_pred cC--CCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCC------CccccCcc
Q 014478 78 HW--ETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG------KSYSTNLA 149 (424)
Q Consensus 78 ~~--~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~------~~~~gt~~ 149 (424)
.. ...++++.++..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++..... ....||+.
T Consensus 158 ~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~-ivHrDlkp~NIll~~~~~~kL~DFgla~~~~~~~~~~~~~~~~gt~~ 236 (478)
T PTZ00267 158 QRLKEHLPFQEYEVGLLFYQIVLALDEVHSRK-MMHRDLKSANIFLMPTGIIKLGDFGFSKQYSDSVSLDVASSFCGTPY 236 (478)
T ss_pred HHHhccCCCCHHHHHHHHHHHHHHHHHHHhCC-EEECCcCHHhEEECCCCcEEEEeCcCceecCCccccccccccCCCcc
Confidence 32 2457899999999999999999999999 999999999999999999999999999865432 23468999
Q ss_pred CCCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHHHHHHHHHhcccCc
Q 014478 150 FTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEA 229 (424)
Q Consensus 150 y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp 229 (424)
|+|||++.+..++.++|||||||++|+|++|+.||........ ...... ......+..++.++.++|.+||..||
T Consensus 237 y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~Pf~~~~~~~~----~~~~~~-~~~~~~~~~~s~~~~~li~~~L~~dP 311 (478)
T PTZ00267 237 YLAPELWERKRYSKKADMWSLGVILYELLTLHRPFKGPSQREI----MQQVLY-GKYDPFPCPVSSGMKALLDPLLSKNP 311 (478)
T ss_pred ccCHhHhCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHHH----HHHHHh-CCCCCCCccCCHHHHHHHHHHhccCh
Confidence 9999999988899999999999999999999988765322111 111111 11223455678899999999999999
Q ss_pred CCCCCHHHHHHH
Q 014478 230 RERPNAKSLVIS 241 (424)
Q Consensus 230 ~~Rps~~~~~~~ 241 (424)
++||++++++.+
T Consensus 312 ~~Rps~~~~l~~ 323 (478)
T PTZ00267 312 ALRPTTQQLLHT 323 (478)
T ss_pred hhCcCHHHHHhC
Confidence 999999999764
|
|
| >PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-41 Score=318.31 Aligned_cols=231 Identities=17% Similarity=0.190 Sum_probs=192.1
Q ss_pred CCCcccceeeeec---ceecccccCCC----chhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHh
Q 014478 2 GGRCSKFSICWFH---CHLKSSVLESS----DLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAK 74 (424)
Q Consensus 2 G~~g~v~~~~~~~---~~v~~~~~~~~----~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~ 74 (424)
|++|.||.+.+.+ ..+++|++... ....+.+.+|+.+++.++||||+++++++.+++..++||||+++|+|.+
T Consensus 41 G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv~Ey~~~g~L~~ 120 (340)
T PTZ00426 41 GSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINHPFCVNLYGSFKDESYLYLVLEFVIGGEFFT 120 (340)
T ss_pred cCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCCcceEEEEEeCCEEEEEEeCCCCCcHHH
Confidence 8999999998743 35777766432 2234578899999999999999999999999999999999999999999
Q ss_pred HhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCC-CccccCccCCCc
Q 014478 75 HLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG-KSYSTNLAFTPP 153 (424)
Q Consensus 75 ~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~-~~~~gt~~y~aP 153 (424)
++.. ...+++..+..++.|++.||.|||+++ ++||||||+|||++.++.+||+|||+++..... ....||+.||||
T Consensus 121 ~i~~--~~~~~~~~~~~~~~qi~~aL~~LH~~~-ivHrDLkp~NILl~~~~~ikL~DFG~a~~~~~~~~~~~gt~~y~aP 197 (340)
T PTZ00426 121 FLRR--NKRFPNDVGCFYAAQIVLIFEYLQSLN-IVYRDLKPENLLLDKDGFIKMTDFGFAKVVDTRTYTLCGTPEYIAP 197 (340)
T ss_pred HHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-eEccCCCHHHEEECCCCCEEEecCCCCeecCCCcceecCChhhcCH
Confidence 9965 457899999999999999999999999 999999999999999999999999999865433 345789999999
Q ss_pred cccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHHHHHHHHHhcccCcCCCC
Q 014478 154 EYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERP 233 (424)
Q Consensus 154 E~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rp 233 (424)
|++.+..++.++|||||||++|||++|..||........ ...+... ....|...++.+.++|.+||+.||.+|+
T Consensus 198 E~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~----~~~i~~~--~~~~p~~~~~~~~~li~~~l~~dp~~R~ 271 (340)
T PTZ00426 198 EILLNVGHGKAADWWTLGIFIYEILVGCPPFYANEPLLI----YQKILEG--IIYFPKFLDNNCKHLMKKLLSHDLTKRY 271 (340)
T ss_pred HHHhCCCCCccccccchhhHHHHHhcCCCCCCCCCHHHH----HHHHhcC--CCCCCCCCCHHHHHHHHHHcccCHHHcC
Confidence 999988899999999999999999999988875422111 1111111 1234556778899999999999999995
Q ss_pred -----CHHHHHHH
Q 014478 234 -----NAKSLVIS 241 (424)
Q Consensus 234 -----s~~~~~~~ 241 (424)
++++++++
T Consensus 272 ~~~~~~~~~~~~h 284 (340)
T PTZ00426 272 GNLKKGAQNVKEH 284 (340)
T ss_pred CCCCCCHHHHHcC
Confidence 88888866
|
|
| >cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-40 Score=312.11 Aligned_cols=239 Identities=16% Similarity=0.260 Sum_probs=193.8
Q ss_pred CCCcccceeeee--cc----eecccccCCC--chhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHH
Q 014478 2 GGRCSKFSICWF--HC----HLKSSVLESS--DLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLA 73 (424)
Q Consensus 2 G~~g~v~~~~~~--~~----~v~~~~~~~~--~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~ 73 (424)
|+||.||++.|. +. .+++|++... ....+.+.+|+.+++.++||||++++|+|... ..++|+||+++|+|.
T Consensus 18 G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~g~~~~~-~~~~v~e~~~~g~l~ 96 (316)
T cd05108 18 GAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS-TVQLITQLMPFGCLL 96 (316)
T ss_pred CCCceEEEEEEecCCCccceeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEcCC-CceeeeecCCCCCHH
Confidence 899999999873 22 2566666433 23467889999999999999999999999864 578999999999999
Q ss_pred hHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCCCc------cccC
Q 014478 74 KHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKS------YSTN 147 (424)
Q Consensus 74 ~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~~~------~~gt 147 (424)
+++.. ....+++..+++++.||+.||.|||+++ ++||||||+|||++.++.+||+|||+++....... ..++
T Consensus 97 ~~l~~-~~~~~~~~~~~~~~~qi~~~L~~LH~~~-iiH~dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~ 174 (316)
T cd05108 97 DYVRE-HKDNIGSQYLLNWCVQIAKGMNYLEERR-LVHRDLAARNVLVKTPQHVKITDFGLAKLLGADEKEYHAEGGKVP 174 (316)
T ss_pred HHHHh-ccccCCHHHHHHHHHHHHHHHHHHHhcC-eeccccchhheEecCCCcEEEccccccccccCCCcceeccCCccc
Confidence 99965 2446889999999999999999999999 99999999999999999999999999986543221 2235
Q ss_pred ccCCCccccccCCCCCCcceehhHHHHHHHhh-CCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHHHHHHHHHhcc
Q 014478 148 LAFTPPEYMRTGRVTPESVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQ 226 (424)
Q Consensus 148 ~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~ 226 (424)
..|+|||++.+..++.++|||||||++|||++ |..|+....... .............+..++.++.+++.+||.
T Consensus 175 ~~y~apE~~~~~~~~~~~Di~slGv~l~el~t~g~~p~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~li~~cl~ 249 (316)
T cd05108 175 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE-----ISSILEKGERLPQPPICTIDVYMIMVKCWM 249 (316)
T ss_pred eeecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHHH-----HHHHHhCCCCCCCCCCCCHHHHHHHHHHcc
Confidence 68999999998899999999999999999997 887765532211 122222222333455667889999999999
Q ss_pred cCcCCCCCHHHHHHHHHHHhhh
Q 014478 227 SEARERPNAKSLVISLMSLQKE 248 (424)
Q Consensus 227 ~dp~~Rps~~~~~~~l~~~~~~ 248 (424)
.||++|||+.+++..+..+...
T Consensus 250 ~~p~~Rps~~~l~~~l~~~~~~ 271 (316)
T cd05108 250 IDADSRPKFRELIIEFSKMARD 271 (316)
T ss_pred CChhhCcCHHHHHHHHHHHHcC
Confidence 9999999999999999887654
|
Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor |
| >cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-40 Score=302.21 Aligned_cols=234 Identities=18% Similarity=0.239 Sum_probs=192.0
Q ss_pred CCCcccceeee----ecceecccccCCCc---hhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHh
Q 014478 2 GGRCSKFSICW----FHCHLKSSVLESSD---LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAK 74 (424)
Q Consensus 2 G~~g~v~~~~~----~~~~v~~~~~~~~~---~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~ 74 (424)
|++|.||++.| .+..+++|++.... ...+.+.+|+.+++.+.||||+++++++.. +..++||||+++|+|.+
T Consensus 6 G~~g~v~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~lv~e~~~~~~L~~ 84 (257)
T cd05116 6 GNFGTVKKGMYKMKKSEKTVAVKILKNDNNDPALKDELLREANVMQQLDNPYIVRMIGICEA-ESWMLVMELAELGPLNK 84 (257)
T ss_pred cCCcceEEeEEecCCCceEEEEEEccCCCCcHHHHHHHHHHHHHHHhCCCCCcceEEEEEcC-CCcEEEEecCCCCcHHH
Confidence 89999999877 34567777765433 235678899999999999999999999864 56789999999999999
Q ss_pred HhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCCC-------ccccC
Q 014478 75 HLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGK-------SYSTN 147 (424)
Q Consensus 75 ~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~~-------~~~gt 147 (424)
++.. ...+++..+..++.|++.||.|||+++ ++||||||+||+++.++.+||+|||+++...... ...++
T Consensus 85 ~l~~--~~~~~~~~~~~i~~qi~~al~~lH~~~-i~H~dlkp~nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~ 161 (257)
T cd05116 85 FLQK--NKHVTEKNITELVHQVSMGMKYLEETN-FVHRDLAARNVLLVTQHYAKISDFGLSKALGADENYYKAKTHGKWP 161 (257)
T ss_pred HHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC-EeecccchhhEEEcCCCeEEECCCccccccCCCCCeeeecCCCCCC
Confidence 9964 457899999999999999999999999 9999999999999999999999999987654322 12235
Q ss_pred ccCCCccccccCCCCCCcceehhHHHHHHHhh-CCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHHHHHHHHHhcc
Q 014478 148 LAFTPPEYMRTGRVTPESVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQ 226 (424)
Q Consensus 148 ~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~ 226 (424)
..|+|||.+....++.++|+|||||++|||++ |..||..... ......+........+..+++++.++|.+||+
T Consensus 162 ~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~-----~~~~~~i~~~~~~~~~~~~~~~l~~li~~~~~ 236 (257)
T cd05116 162 VKWYAPECMNYYKFSSKSDVWSFGVLMWEAFSYGQKPYKGMKG-----NEVTQMIESGERMECPQRCPPEMYDLMKLCWT 236 (257)
T ss_pred ccccCHhHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCH-----HHHHHHHHCCCCCCCCCCCCHHHHHHHHHHhc
Confidence 78999999988889999999999999999998 8877764311 12222333333345566788999999999999
Q ss_pred cCcCCCCCHHHHHHHHHH
Q 014478 227 SEARERPNAKSLVISLMS 244 (424)
Q Consensus 227 ~dp~~Rps~~~~~~~l~~ 244 (424)
.||++||++.+|...|+.
T Consensus 237 ~~p~~Rp~~~~i~~~l~~ 254 (257)
T cd05116 237 YGVDERPGFAVVELRLRN 254 (257)
T ss_pred cCchhCcCHHHHHHHHhc
Confidence 999999999999988865
|
Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio |
| >cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.6e-41 Score=308.61 Aligned_cols=237 Identities=17% Similarity=0.235 Sum_probs=191.1
Q ss_pred CCCcccceeee--ecceecccccCCCch----hhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHhH
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESSDL----GETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKH 75 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~~~----~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~ 75 (424)
|+||.||.+.+ .+..+++|++..... ..+.+..|+++++.++||||+++.+++..+...++||||+++|+|..+
T Consensus 4 G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~g~L~~~ 83 (280)
T cd05608 4 GGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFIVSLAYAFQTKTDLCLVMTIMNGGDLRYH 83 (280)
T ss_pred CCceeEEEEEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCCCCcEeeeeEEEcCCCeEEEEEeCCCCCCHHHH
Confidence 89999999887 456777777654322 235677899999999999999999999999999999999999999987
Q ss_pred hccC--CCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCC----CccccCcc
Q 014478 76 LFHW--ETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG----KSYSTNLA 149 (424)
Q Consensus 76 l~~~--~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~----~~~~gt~~ 149 (424)
+... ....+++..++.++.||+.||.|||+++ |+||||||+||+++.++.++|+|||++...... ....||+.
T Consensus 84 ~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~-i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~ 162 (280)
T cd05608 84 IYNVDEENPGFPEPRACFYTAQIISGLEHLHQRR-IIYRDLKPENVLLDNDGNVRISDLGLAVELKDGQSKTKGYAGTPG 162 (280)
T ss_pred HHhccccCCCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCCHHHEEECCCCCEEEeeCccceecCCCCccccccCCCcC
Confidence 7431 2456899999999999999999999999 999999999999999999999999998765433 23468899
Q ss_pred CCCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHHHHHHHHHhcccCc
Q 014478 150 FTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEA 229 (424)
Q Consensus 150 y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp 229 (424)
|+|||++.+..++.++|||||||++|+|++|+.||................... ....+..+++++.+++.+||+.||
T Consensus 163 y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~li~~~l~~~P 240 (280)
T cd05608 163 FMAPELLQGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRILND--SVTYPDKFSPASKSFCEALLAKDP 240 (280)
T ss_pred ccCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCcchhHHHHHHhhccc--CCCCcccCCHHHHHHHHHHhcCCH
Confidence 999999998899999999999999999999998886532111111111111111 123445678899999999999999
Q ss_pred CCCC-----CHHHHHHH
Q 014478 230 RERP-----NAKSLVIS 241 (424)
Q Consensus 230 ~~Rp-----s~~~~~~~ 241 (424)
++|| ++++++++
T Consensus 241 ~~R~~~~~~~~~~~l~h 257 (280)
T cd05608 241 EKRLGFRDGNCDGLRTH 257 (280)
T ss_pred HHhcCCCCCCHHHHhcC
Confidence 9999 67778765
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g |
| >cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-40 Score=302.32 Aligned_cols=237 Identities=20% Similarity=0.307 Sum_probs=195.6
Q ss_pred CCCcccceeeee-cceecccccCCCchhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHhHhccCC
Q 014478 2 GGRCSKFSICWF-HCHLKSSVLESSDLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWE 80 (424)
Q Consensus 2 G~~g~v~~~~~~-~~~v~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~ 80 (424)
|++|.||.+.+. +..+++|.+.......+.+.+|++++++++||||+++++++...+..++||||+++++|.+++....
T Consensus 17 g~~~~v~~~~~~~~~~v~iK~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~ 96 (261)
T cd05068 17 GQFGEVWEGLWNNTTPVAVKTLKPGTMDPKDFLAEAQIMKKLRHPKLIQLYAVCTLEEPIYIVTELMKYGSLLEYLQGGA 96 (261)
T ss_pred cCCccEEEEEecCCeEEEEEeeCCCcccHHHHHHHHHHHHHCCCCCccceeEEEecCCCeeeeeecccCCcHHHHHhccC
Confidence 889999998873 3457777776655556789999999999999999999999999999999999999999999997644
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCCC--ccc---cCccCCCccc
Q 014478 81 TQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGK--SYS---TNLAFTPPEY 155 (424)
Q Consensus 81 ~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~~--~~~---gt~~y~aPE~ 155 (424)
+..+++.++..++.|++.||.|||+++ ++||||||+||+++.++.++|+|||+++...... ... .+..|+|||.
T Consensus 97 ~~~~~~~~~~~~~~~i~~~l~~lH~~~-i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~ 175 (261)
T cd05068 97 GRALKLPQLIDMAAQVASGMAYLEAQN-YIHRDLAARNVLVGENNICKVADFGLARVIKEDIYEAREGAKFPIKWTAPEA 175 (261)
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHhCC-eeeccCCcceEEEcCCCCEEECCcceEEEccCCcccccCCCcCceeccCccc
Confidence 457899999999999999999999999 9999999999999999999999999988655321 112 2357999999
Q ss_pred cccCCCCCCcceehhHHHHHHHhh-CCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHHHHHHHHHhcccCcCCCCC
Q 014478 156 MRTGRVTPESVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERPN 234 (424)
Q Consensus 156 ~~~~~~~~~~Dv~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps 234 (424)
+.+..++.++||||||+++|+|++ |+.||...... .....+........+..++..+.+++.+||+.+|.+||+
T Consensus 176 ~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~ 250 (261)
T cd05068 176 ALYNRFSIKSDVWSFGILLTEIVTYGRMPYPGMTNA-----EVLQQVDQGYRMPCPPGCPKELYDIMLDCWKEDPDDRPT 250 (261)
T ss_pred cccCCCCchhhHHHHHHHHHHHHhcCCCCCCCCCHH-----HHHHHHHcCCCCCCCCcCCHHHHHHHHHHhhcCcccCCC
Confidence 998889999999999999999999 88777553211 111122222222345567789999999999999999999
Q ss_pred HHHHHHHHHH
Q 014478 235 AKSLVISLMS 244 (424)
Q Consensus 235 ~~~~~~~l~~ 244 (424)
+.+++..|+.
T Consensus 251 ~~~l~~~l~~ 260 (261)
T cd05068 251 FETLQWKLED 260 (261)
T ss_pred HHHHHHHHhc
Confidence 9999988864
|
Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a |
| >KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-41 Score=307.11 Aligned_cols=238 Identities=18% Similarity=0.187 Sum_probs=195.0
Q ss_pred CCCcccceeee--ecceecccccCCCchh---------------hhHHHHHHHHHhcCCCcCcceeEEEEEeC--CeeeE
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESSDLG---------------ETLNLEEAKAVGNLRSERLANLIGCCYEA--DERLL 62 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~~~~---------------~~~~~~E~~~l~~l~h~~iv~~~~~~~~~--~~~~l 62 (424)
|.+|.|-.+.. .+..+|+|++.+.+.. .+...+||.+|+++.|||||+++.+..+. +.+||
T Consensus 108 G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H~nVV~LiEvLDDP~s~~~Yl 187 (576)
T KOG0585|consen 108 GQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHHPNVVKLIEVLDDPESDKLYL 187 (576)
T ss_pred CccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCCcCeeEEEEeecCcccCceEE
Confidence 67788877776 6788888888544321 24678899999999999999999998764 56899
Q ss_pred EEecCCCCCHHhHhccCCCCC-CCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCC
Q 014478 63 VAEFMPNETLAKHLFHWETQP-MKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG 141 (424)
Q Consensus 63 v~e~~~~gsL~~~l~~~~~~~-l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~ 141 (424)
|+|||..|.+...- ...+ +++.++++++++++.||+|||.++ ||||||||+|+|++.+|++||+|||.+.....+
T Consensus 188 Vley~s~G~v~w~p---~d~~els~~~Ar~ylrDvv~GLEYLH~Qg-iiHRDIKPsNLLl~~~g~VKIsDFGVs~~~~~~ 263 (576)
T KOG0585|consen 188 VLEYCSKGEVKWCP---PDKPELSEQQARKYLRDVVLGLEYLHYQG-IIHRDIKPSNLLLSSDGTVKISDFGVSNEFPQG 263 (576)
T ss_pred EEEeccCCccccCC---CCcccccHHHHHHHHHHHHHHHHHHHhcC-eeccccchhheEEcCCCcEEeeccceeeecccC
Confidence 99999998876543 3445 999999999999999999999999 999999999999999999999999998865332
Q ss_pred ---------CccccCccCCCccccccCC----CCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhcccCCC
Q 014478 142 ---------KSYSTNLAFTPPEYMRTGR----VTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGH 208 (424)
Q Consensus 142 ---------~~~~gt~~y~aPE~~~~~~----~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (424)
....||+.|||||...++. .+.+.||||+||+||.|+.|+.||... .....+.+++...+..+
T Consensus 264 ~~~~~d~~L~~tvGTPAF~APE~c~~~~~~~~~g~a~DiWalGVTLYCllfG~~PF~~~----~~~~l~~KIvn~pL~fP 339 (576)
T KOG0585|consen 264 SDEGSDDQLSRTVGTPAFFAPELCSGGNSFSYSGFALDIWALGVTLYCLLFGQLPFFDD----FELELFDKIVNDPLEFP 339 (576)
T ss_pred CccccHHHHhhcCCCccccchHhhcCCCCccccchhhhhhhhhhhHHHhhhccCCcccc----hHHHHHHHHhcCcccCC
Confidence 2357999999999998743 356889999999999999999998876 33444445555555444
Q ss_pred CCchhHHHHHHHHHHhcccCcCCCCCHHHHHHHHHHHhh
Q 014478 209 FSNDEGTELVRLASRCLQSEARERPNAKSLVISLMSLQK 247 (424)
Q Consensus 209 ~~~~~~~~l~~li~~cl~~dp~~Rps~~~~~~~l~~~~~ 247 (424)
..+.+.+++.+||.++|.+||++|.+..+|..|.+....
T Consensus 340 ~~pe~~e~~kDli~~lL~KdP~~Ri~l~~ik~Hpwvt~~ 378 (576)
T KOG0585|consen 340 ENPEINEDLKDLIKRLLEKDPEQRITLPDIKLHPWVTRD 378 (576)
T ss_pred CcccccHHHHHHHHHHhhcChhheeehhhheecceeccC
Confidence 445678899999999999999999999999988765543
|
|
| >cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.2e-41 Score=316.16 Aligned_cols=237 Identities=16% Similarity=0.132 Sum_probs=193.1
Q ss_pred CCCcccceeee--ecceecccccCCCc----hhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHhH
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESSD----LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKH 75 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~~----~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~ 75 (424)
|++|.||.+.+ .+..+++|++.... .....+.+|++++..++||||+++++++..++..++||||++||+|.++
T Consensus 12 G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~~g~~L~~~ 91 (333)
T cd05600 12 GGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEWLVKLLYAFQDDEYLYLAMEYVPGGDFRTL 91 (333)
T ss_pred cCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCCCCCccEEEEEEcCCEEEEEEeCCCCCCHHHH
Confidence 89999999988 45678888775432 2345688899999999999999999999999999999999999999999
Q ss_pred hccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCC-CCccccCccCCCcc
Q 014478 76 LFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRD-GKSYSTNLAFTPPE 154 (424)
Q Consensus 76 l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~-~~~~~gt~~y~aPE 154 (424)
+.. ...+++.++..++.|++.||.|||+++ ++||||||+|||++.++.+||+|||+++.... .....||+.|+|||
T Consensus 92 l~~--~~~l~~~~~~~~~~qi~~~l~~lH~~~-ivH~dlkp~Nil~~~~~~~kL~Dfg~a~~~~~~~~~~~gt~~y~aPE 168 (333)
T cd05600 92 LNN--LGVLSEDHARFYMAEMFEAVDALHELG-YIHRDLKPENFLIDASGHIKLTDFGLSKGIVTYANSVVGSPDYMAPE 168 (333)
T ss_pred HHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-ccccCCCHHHEEECCCCCEEEEeCcCCcccccccCCcccCccccChh
Confidence 964 457899999999999999999999999 99999999999999999999999999886544 23457899999999
Q ss_pred ccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhh--hHhhhcccCCCCCchhHHHHHHHHHHhcccCcCCC
Q 014478 155 YMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNF--LLLMDSALEGHFSNDEGTELVRLASRCLQSEARER 232 (424)
Q Consensus 155 ~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~R 232 (424)
++.+..++.++|||||||++|||++|..||............. ...............++.++.+++.+||..+|.+|
T Consensus 169 ~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~~li~~~l~~~~~rr 248 (333)
T cd05600 169 VLRGKGYDFTVDYWSLGCMLYEFLCGFPPFSGSTPNETWENLKYWKETLQRPVYDDPRFNLSDEAWDLITKLINDPSRRF 248 (333)
T ss_pred HhcCCCCCCccceecchHHHhhhhhCCCCCCCCCHHHHHHHHHhccccccCCCCCccccccCHHHHHHHHHHhhChhhhc
Confidence 9998899999999999999999999998887542221111000 00000000000012457899999999999999999
Q ss_pred CCHHHHHHH
Q 014478 233 PNAKSLVIS 241 (424)
Q Consensus 233 ps~~~~~~~ 241 (424)
||+.+++.+
T Consensus 249 ~s~~~ll~h 257 (333)
T cd05600 249 GSLEDIKNH 257 (333)
T ss_pred CCHHHHHhC
Confidence 999999976
|
Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis. |
| >cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-40 Score=300.85 Aligned_cols=235 Identities=21% Similarity=0.281 Sum_probs=191.4
Q ss_pred CCCcccceeee--ecceecccccCCC--chhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHhHhc
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESS--DLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLF 77 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~--~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~ 77 (424)
|++|.||.+.+ .+..+++|..... ......|.+|+++++.++||||++++++|......++||||+++++|.+++.
T Consensus 6 g~~g~vy~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~ 85 (252)
T cd05084 6 GNFGEVFSGRLRADNTPVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLR 85 (252)
T ss_pred ccCccEEEEEEecCCceEEEEecCccCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEcCCCCeEEEEeeccCCcHHHHHH
Confidence 89999999987 4566777765432 3345678999999999999999999999999999999999999999999986
Q ss_pred cCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCCC------ccccCccCC
Q 014478 78 HWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGK------SYSTNLAFT 151 (424)
Q Consensus 78 ~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~~------~~~gt~~y~ 151 (424)
. .+..+++.+++.++.|++.||.|||+++ ++||||||+||+++.++.+||+|||++....... ...++..|+
T Consensus 86 ~-~~~~~~~~~~~~~~~qi~~~L~~lH~~~-i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~ 163 (252)
T cd05084 86 T-EGPRLKVKELIQMVENAAAGMEYLESKH-CIHRDLAARNCLVTEKNVLKISDFGMSREEEDGVYASTGGMKQIPVKWT 163 (252)
T ss_pred h-CCCCCCHHHHHHHHHHHHHHHHHHHhCC-ccccccchheEEEcCCCcEEECccccCcccccccccccCCCCCCceeec
Confidence 4 3456899999999999999999999999 9999999999999999999999999987544321 112245699
Q ss_pred CccccccCCCCCCcceehhHHHHHHHhh-CCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHHHHHHHHHhcccCcC
Q 014478 152 PPEYMRTGRVTPESVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEAR 230 (424)
Q Consensus 152 aPE~~~~~~~~~~~Dv~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~ 230 (424)
|||.+.++.++.++||||||+++|+|++ |..|+..... ...............+..++..+.+++.+||..||+
T Consensus 164 aPE~~~~~~~~~~~Dv~slG~il~e~~~~~~~p~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~ 238 (252)
T cd05084 164 APEALNYGRYSSESDVWSFGILLWEAFSLGAVPYANLSN-----QQTREAIEQGVRLPCPELCPDAVYRLMERCWEYDPG 238 (252)
T ss_pred CchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccCH-----HHHHHHHHcCCCCCCcccCCHHHHHHHHHHcCCChh
Confidence 9999998889999999999999999998 6655543211 112222222233345566788999999999999999
Q ss_pred CCCCHHHHHHHHH
Q 014478 231 ERPNAKSLVISLM 243 (424)
Q Consensus 231 ~Rps~~~~~~~l~ 243 (424)
+|||+.++++.|+
T Consensus 239 ~Rps~~~~~~~l~ 251 (252)
T cd05084 239 QRPSFSTVHQELQ 251 (252)
T ss_pred hCcCHHHHHHHHh
Confidence 9999999998875
|
Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular |
| >cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-40 Score=313.12 Aligned_cols=239 Identities=18% Similarity=0.275 Sum_probs=189.4
Q ss_pred CCCcccceeeee--cceecccccCCC--chhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHhHhc
Q 014478 2 GGRCSKFSICWF--HCHLKSSVLESS--DLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLF 77 (424)
Q Consensus 2 G~~g~v~~~~~~--~~~v~~~~~~~~--~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~ 77 (424)
|++|.||.+.+. +..+++|++... ......+.+|+++++.++||||++++++|..++..++||||+++|+|.+++.
T Consensus 16 g~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~ 95 (333)
T cd06650 16 GNGGVVFKVSHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLK 95 (333)
T ss_pred CCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCcccceeEEEEECCEEEEEEecCCCCcHHHHHH
Confidence 899999999884 455666655432 2345678899999999999999999999999999999999999999999996
Q ss_pred cCCCCCCCHHHHHHHHHHHHHHHHHHHhC-CCcccccCCCCCeeecCCCCeEEccccccccCCCC--CccccCccCCCcc
Q 014478 78 HWETQPMKWAMRLRVALYLAQALEYCSSK-GRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG--KSYSTNLAFTPPE 154 (424)
Q Consensus 78 ~~~~~~l~~~~~~~i~~qi~~~L~~lH~~-~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~--~~~~gt~~y~aPE 154 (424)
. ...+++..+..++.|++.||.|||++ + ++||||||+|||++.++.+||+|||++...... ....||..|+|||
T Consensus 96 ~--~~~~~~~~~~~~~~~l~~~l~~lH~~~~-ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~y~aPE 172 (333)
T cd06650 96 K--AGRIPEQILGKVSIAVIKGLTYLREKHK-IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPE 172 (333)
T ss_pred H--cCCCCHHHHHHHHHHHHHHHHHHHhcCC-EEecCCChhhEEEcCCCCEEEeeCCcchhhhhhccccCCCCccccCHH
Confidence 4 45689999999999999999999985 6 999999999999999999999999998755332 3456899999999
Q ss_pred ccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhh---------------------------------------
Q 014478 155 YMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSK--------------------------------------- 195 (424)
Q Consensus 155 ~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~--------------------------------------- 195 (424)
++.+..++.++|||||||++|+|++|+.||...........
T Consensus 173 ~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (333)
T cd06650 173 RLQGTHYSVQSDIWSMGLSLVEMAIGRYPIPPPDAKELELMFGCPVEGDPAESETSPRPRPPGRPLSSYGPDSRPPMAIF 252 (333)
T ss_pred HhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcchhHHHHHhcCcccCCccccccCcccCCccchhhhhcccccccccHH
Confidence 99988899999999999999999999988765322111100
Q ss_pred hhhHhhhcccCCCC-CchhHHHHHHHHHHhcccCcCCCCCHHHHHHHHH
Q 014478 196 NFLLLMDSALEGHF-SNDEGTELVRLASRCLQSEARERPNAKSLVISLM 243 (424)
Q Consensus 196 ~~~~~~~~~~~~~~-~~~~~~~l~~li~~cl~~dp~~Rps~~~~~~~l~ 243 (424)
.....+........ ....+.++.+|+.+||+.||++|||+.+++.+-.
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~P~~Rpt~~ell~h~~ 301 (333)
T cd06650 253 ELLDYIVNEPPPKLPSGVFGAEFQDFVNKCLIKNPAERADLKQLMVHAF 301 (333)
T ss_pred HHHHHHhcCCCccCCCCCcCHHHHHHHHHhccCCcccCcCHHHHhhCHH
Confidence 00000000001111 1124678999999999999999999999987643
|
Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst |
| >KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-41 Score=284.73 Aligned_cols=236 Identities=19% Similarity=0.221 Sum_probs=202.8
Q ss_pred CCCcccceeee--ecceecccccCCCchh----hhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHhH
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESSDLG----ETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKH 75 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~~~~----~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~ 75 (424)
|=||.||.+.. ....|+.|++.+++.. ...+.+|+++-..|+||||+++|++|.+....|+++||.++|+|...
T Consensus 33 gkFG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~hpnilrlY~~fhd~~riyLilEya~~gel~k~ 112 (281)
T KOG0580|consen 33 GKFGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHLRHPNILRLYGYFHDSKRIYLILEYAPRGELYKD 112 (281)
T ss_pred CccccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEeecccCCccHHhhhhheeccceeEEEEEecCCchHHHH
Confidence 67999999987 4556788888776643 45788999999999999999999999999999999999999999999
Q ss_pred hccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCC--CCccccCccCCCc
Q 014478 76 LFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRD--GKSYSTNLAFTPP 153 (424)
Q Consensus 76 l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~--~~~~~gt~~y~aP 153 (424)
|.......+++.....++.|+|.||.|+|.++ ||||||||+|+|++..+.+|++|||-+..... ..+.+||..|.+|
T Consensus 113 L~~~~~~~f~e~~~a~Yi~q~A~Al~y~h~k~-VIhRdiKpenlLlg~~~~lkiAdfGwsV~~p~~kR~tlcgt~dyl~p 191 (281)
T KOG0580|consen 113 LQEGRMKRFDEQRAATYIKQLANALLYCHLKR-VIHRDIKPENLLLGSAGELKIADFGWSVHAPSNKRKTLCGTLDYLPP 191 (281)
T ss_pred HHhcccccccccchhHHHHHHHHHHHHhccCC-cccCCCCHHHhccCCCCCeeccCCCceeecCCCCceeeecccccCCH
Confidence 98656778999999999999999999999999 99999999999999999999999998876543 3567899999999
Q ss_pred cccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHHHHHHHHHhcccCcCCCC
Q 014478 154 EYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERP 233 (424)
Q Consensus 154 E~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rp 233 (424)
|+..+...+...|+|++|++.||++.|.+||..... ......+.. ..-.+|..++.+..++|.+|+.++|.+|.
T Consensus 192 Emv~~~~hd~~Vd~w~lgvl~yeflvg~ppFes~~~----~etYkrI~k--~~~~~p~~is~~a~dlI~~ll~~~p~~r~ 265 (281)
T KOG0580|consen 192 EMVEGRGHDKFVDLWSLGVLCYEFLVGLPPFESQSH----SETYKRIRK--VDLKFPSTISGGAADLISRLLVKNPIERL 265 (281)
T ss_pred hhcCCCCccchhhHHHHHHHHHHHHhcCCchhhhhh----HHHHHHHHH--ccccCCcccChhHHHHHHHHhccCccccc
Confidence 999999999999999999999999999988877532 222222222 12235577888999999999999999999
Q ss_pred CHHHHHHHHHH
Q 014478 234 NAKSLVISLMS 244 (424)
Q Consensus 234 s~~~~~~~l~~ 244 (424)
+..+++++-+-
T Consensus 266 ~l~~v~~hpwI 276 (281)
T KOG0580|consen 266 ALTEVMDHPWI 276 (281)
T ss_pred cHHHHhhhHHH
Confidence 99999987553
|
|
| >cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-40 Score=301.62 Aligned_cols=234 Identities=22% Similarity=0.321 Sum_probs=191.8
Q ss_pred CCCcccceeeeecc-eecccccCCCchhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHhHhccCC
Q 014478 2 GGRCSKFSICWFHC-HLKSSVLESSDLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWE 80 (424)
Q Consensus 2 G~~g~v~~~~~~~~-~v~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~ 80 (424)
|++|.||.+.+.+. .+++|.+.......+.|.+|+.++++++||||+++++++......++||||+.+|+|.+++...
T Consensus 15 G~~~~vy~~~~~~~~~~aik~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~i~~~- 93 (256)
T cd05113 15 GQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMKLSHEKLVQLYGVCTKQRPIYIVTEYMSNGCLLNYLREH- 93 (256)
T ss_pred cccceEEEEEecCCCcEEEEEcCCCcccHHHHHHHHHHHhcCCCCCeeeEEEEEccCCCcEEEEEcCCCCcHHHHHHhc-
Confidence 78999999988554 4777777655555678999999999999999999999999888899999999999999998653
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCCC-----ccccCccCCCccc
Q 014478 81 TQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGK-----SYSTNLAFTPPEY 155 (424)
Q Consensus 81 ~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~~-----~~~gt~~y~aPE~ 155 (424)
...+++.+++.++.||+.||.|||+.+ ++|+||||+||+++.++.+||+|||.++...... ...++..|+|||+
T Consensus 94 ~~~~~~~~~~~~~~~i~~~l~~lH~~~-i~H~dl~p~nili~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~y~~pe~ 172 (256)
T cd05113 94 GKRFQPSQLLEMCKDVCEGMAYLESKQ-FIHRDLAARNCLVDDQGCVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEV 172 (256)
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHhCC-eeccccCcceEEEcCCCCEEECCCccceecCCCceeecCCCccChhhCCHHH
Confidence 347899999999999999999999999 9999999999999999999999999987654322 1234567999999
Q ss_pred cccCCCCCCcceehhHHHHHHHhh-CCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHHHHHHHHHhcccCcCCCCC
Q 014478 156 MRTGRVTPESVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERPN 234 (424)
Q Consensus 156 ~~~~~~~~~~Dv~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps 234 (424)
+.+..++.++|||||||++|+|++ |..|+...... ..............+...+..+.+++.+||..||.+||+
T Consensus 173 ~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~ 247 (256)
T cd05113 173 LLYSKFSSKSDVWAFGVLMWEVYSLGKMPYERFNNS-----ETVEKVSQGLRLYRPHLASEKVYAIMYSCWHEKAEERPT 247 (256)
T ss_pred HhcCcccchhHHHHHHHHHHHHhcCCCCCcCcCCHH-----HHHHHHhcCCCCCCCCCCCHHHHHHHHHHcCCCcccCCC
Confidence 998889999999999999999998 87776543211 111111122222334456789999999999999999999
Q ss_pred HHHHHHHH
Q 014478 235 AKSLVISL 242 (424)
Q Consensus 235 ~~~~~~~l 242 (424)
+.+++..|
T Consensus 248 ~~~ll~~~ 255 (256)
T cd05113 248 FQQLLSSI 255 (256)
T ss_pred HHHHHHhh
Confidence 99998765
|
Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds |
| >cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-41 Score=317.06 Aligned_cols=231 Identities=19% Similarity=0.247 Sum_probs=191.4
Q ss_pred CCCcccceeee--ecceecccccCCC----chhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHhH
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESS----DLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKH 75 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~----~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~ 75 (424)
|+||.||.+.. .+..+++|++... ......+.+|++++..++||||+++++++..++..++||||+++|+|..+
T Consensus 6 G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~~~L~~~ 85 (325)
T cd05594 6 GTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFH 85 (325)
T ss_pred CCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCCceEEEEEcCCEEEEEEeCCCCCcHHHH
Confidence 89999998876 5667777777542 22345678899999999999999999999999999999999999999998
Q ss_pred hccCCCCCCCHHHHHHHHHHHHHHHHHHHh-CCCcccccCCCCCeeecCCCCeEEccccccccCCCC----CccccCccC
Q 014478 76 LFHWETQPMKWAMRLRVALYLAQALEYCSS-KGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG----KSYSTNLAF 150 (424)
Q Consensus 76 l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~-~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~----~~~~gt~~y 150 (424)
+.. ...+++.++..++.||+.||.|||+ ++ |+||||||+|||++.++.+||+|||+++..... ....||+.|
T Consensus 86 l~~--~~~l~~~~~~~~~~qi~~aL~~lH~~~~-ivHrDikp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~gt~~y 162 (325)
T cd05594 86 LSR--ERVFSEDRARFYGAEIVSALDYLHSEKN-VVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFCGTPEY 162 (325)
T ss_pred HHh--cCCCCHHHHHHHHHHHHHHHHHHHhcCC-EEecCCCCCeEEECCCCCEEEecCCCCeecCCCCcccccccCCccc
Confidence 864 4578999999999999999999997 78 999999999999999999999999998753321 234689999
Q ss_pred CCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHHHHHHHHHhcccCcC
Q 014478 151 TPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEAR 230 (424)
Q Consensus 151 ~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~ 230 (424)
+|||++.+..++.++|||||||++|+|++|..||.......... .... .....+..+++++.+++.+||+.||+
T Consensus 163 ~aPE~~~~~~~~~~~DiwslG~il~el~tG~~Pf~~~~~~~~~~----~i~~--~~~~~p~~~~~~~~~li~~~L~~dP~ 236 (325)
T cd05594 163 LAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFE----LILM--EEIRFPRTLSPEAKSLLSGLLKKDPK 236 (325)
T ss_pred CCHHHHccCCCCCccccccccceeeeeccCCCCCCCCCHHHHHH----HHhc--CCCCCCCCCCHHHHHHHHHHhhcCHH
Confidence 99999998889999999999999999999998886542221111 1111 12234556788999999999999999
Q ss_pred CCC-----CHHHHHHH
Q 014478 231 ERP-----NAKSLVIS 241 (424)
Q Consensus 231 ~Rp-----s~~~~~~~ 241 (424)
+|+ ++.+++++
T Consensus 237 ~R~~~~~~~~~~il~h 252 (325)
T cd05594 237 QRLGGGPDDAKEIMQH 252 (325)
T ss_pred HhCCCCCCCHHHHhcC
Confidence 996 89999876
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien |
| >cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-40 Score=300.47 Aligned_cols=236 Identities=18% Similarity=0.256 Sum_probs=191.8
Q ss_pred CCCcccceeeee----cceecccccCCCc--hhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHhH
Q 014478 2 GGRCSKFSICWF----HCHLKSSVLESSD--LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKH 75 (424)
Q Consensus 2 G~~g~v~~~~~~----~~~v~~~~~~~~~--~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~ 75 (424)
|+||.||.+.+. +..+++|++.... ...+.|.+|+.++++++||||+++++++.. ...++||||+++|+|.++
T Consensus 6 G~~g~v~~~~~~~~~~~~~vavk~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~-~~~~lv~e~~~~~~L~~~ 84 (257)
T cd05115 6 GNFGCVKKGVYKMRKKQIDVAIKVLKNENEKSVRDEMMREAEIMHQLDNPYIVRMIGVCEA-EALMLVMEMASGGPLNKF 84 (257)
T ss_pred CCcccEEEEEEecCCCceeEEEEEcccccChHHHHHHHHHHHHHHhcCCCCeEEEEEEEcC-CCeEEEEEeCCCCCHHHH
Confidence 899999998874 3346777665433 235678899999999999999999999864 468899999999999999
Q ss_pred hccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCCCc-------cccCc
Q 014478 76 LFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKS-------YSTNL 148 (424)
Q Consensus 76 l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~~~-------~~gt~ 148 (424)
+.. ....+++.++++++.|++.||.|||+++ ++||||||+||+++.++.+||+|||+++....... ..++.
T Consensus 85 l~~-~~~~~~~~~~~~~~~~i~~~l~~lH~~~-i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~ 162 (257)
T cd05115 85 LSG-KKDEITVSNVVELMHQVSMGMKYLEGKN-FVHRDLAARNVLLVNQHYAKISDFGLSKALGADDSYYKARSAGKWPL 162 (257)
T ss_pred HHh-CCCCCCHHHHHHHHHHHHHHHHHHHhcC-eeecccchheEEEcCCCcEEeccCCccccccCCccceeccCCCCCCc
Confidence 864 2457899999999999999999999999 99999999999999999999999999875433211 12356
Q ss_pred cCCCccccccCCCCCCcceehhHHHHHHHhh-CCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHHHHHHHHHhccc
Q 014478 149 AFTPPEYMRTGRVTPESVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQS 227 (424)
Q Consensus 149 ~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~ 227 (424)
.|+|||++.+..++.++|||||||++|++++ |..||.... .......+........+..+++++.+++.+||..
T Consensus 163 ~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c~~~ 237 (257)
T cd05115 163 KWYAPECINFRKFSSRSDVWSYGITMWEAFSYGQKPYKKMK-----GPEVMSFIEQGKRLDCPAECPPEMYALMKDCWIY 237 (257)
T ss_pred ccCCHHHHccCCCCchhhHHHHHHHHHHHhcCCCCCcCcCC-----HHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHcCC
Confidence 8999999988889999999999999999996 887765431 1122222333334455667789999999999999
Q ss_pred CcCCCCCHHHHHHHHHHH
Q 014478 228 EARERPNAKSLVISLMSL 245 (424)
Q Consensus 228 dp~~Rps~~~~~~~l~~~ 245 (424)
||++||++.+|.+.|+..
T Consensus 238 ~~~~Rp~~~~i~~~l~~~ 255 (257)
T cd05115 238 KWEDRPNFAKVEERMRTY 255 (257)
T ss_pred ChhhCcCHHHHHHHHhhh
Confidence 999999999999888754
|
Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho |
| >cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-40 Score=319.94 Aligned_cols=240 Identities=20% Similarity=0.285 Sum_probs=194.0
Q ss_pred CCCcccceeeeec-------ceecccccCCCc--hhhhHHHHHHHHHhcCC-CcCcceeEEEEEeCCeeeEEEecCCCCC
Q 014478 2 GGRCSKFSICWFH-------CHLKSSVLESSD--LGETLNLEEAKAVGNLR-SERLANLIGCCYEADERLLVAEFMPNET 71 (424)
Q Consensus 2 G~~g~v~~~~~~~-------~~v~~~~~~~~~--~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~~lv~e~~~~gs 71 (424)
||||.||++.+.+ ..|++|++.... ...+.+.+|++++.++. ||||++++++|......+|||||+++|+
T Consensus 48 G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~~l~~l~~HpnIv~l~~~~~~~~~~~lv~Ey~~~g~ 127 (400)
T cd05105 48 GAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSEKQALMSELKIMTHLGPHLNIVNLLGACTKSGPIYIITEYCFYGD 127 (400)
T ss_pred CCCceEEEEEEcccCCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhcCCCCCeeeEEEEEccCCceEEEEEecCCCc
Confidence 8999999998743 236777775432 33567899999999995 9999999999999999999999999999
Q ss_pred HHhHhccCC-----------------------------------------------------------------------
Q 014478 72 LAKHLFHWE----------------------------------------------------------------------- 80 (424)
Q Consensus 72 L~~~l~~~~----------------------------------------------------------------------- 80 (424)
|.+++....
T Consensus 128 L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (400)
T cd05105 128 LVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENKGDYMDMKQADTTQYVPMLEIKEASKYSDIQRSN 207 (400)
T ss_pred HHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhcccccccccccccccccchhhhhhhhhhhhhcccCc
Confidence 999875321
Q ss_pred -----------------------CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEcccccccc
Q 014478 81 -----------------------TQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKN 137 (424)
Q Consensus 81 -----------------------~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~ 137 (424)
...+++.+++.++.|++.||.|||+++ ++||||||+|||++.++.+||+|||+++.
T Consensus 208 ~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~-ivH~dikp~Nill~~~~~~kL~DfGla~~ 286 (400)
T cd05105 208 YDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLASKN-CVHRDLAARNVLLAQGKIVKICDFGLARD 286 (400)
T ss_pred ccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCC-eeCCCCChHhEEEeCCCEEEEEeCCccee
Confidence 124788899999999999999999999 99999999999999999999999999876
Q ss_pred CCCCC------ccccCccCCCccccccCCCCCCcceehhHHHHHHHhh-CCCCCCchhhHHHhhhhhhHhhhcccCCCCC
Q 014478 138 SRDGK------SYSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKNFLLLMDSALEGHFS 210 (424)
Q Consensus 138 ~~~~~------~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 210 (424)
..... ...++..|+|||++.+..++.++|||||||++|||++ |..||+..... ......+........+
T Consensus 287 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt~g~~P~~~~~~~----~~~~~~~~~~~~~~~~ 362 (400)
T cd05105 287 IMHDSNYVSKGSTFLPVKWMAPESIFDNLYTTLSDVWSYGILLWEIFSLGGTPYPGMIVD----STFYNKIKSGYRMAKP 362 (400)
T ss_pred ccccccccccCCcCCCcceEChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCcccchh----HHHHHHHhcCCCCCCC
Confidence 53221 2235678999999998889999999999999999997 87777653211 1111222222233445
Q ss_pred chhHHHHHHHHHHhcccCcCCCCCHHHHHHHHHHHh
Q 014478 211 NDEGTELVRLASRCLQSEARERPNAKSLVISLMSLQ 246 (424)
Q Consensus 211 ~~~~~~l~~li~~cl~~dp~~Rps~~~~~~~l~~~~ 246 (424)
..++.++.+++.+||..||++|||+.++.+.|+++.
T Consensus 363 ~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~l~~l~ 398 (400)
T cd05105 363 DHATQEVYDIMVKCWNSEPEKRPSFLHLSDIVESLL 398 (400)
T ss_pred ccCCHHHHHHHHHHCccCHhHCcCHHHHHHHHHHHc
Confidence 567889999999999999999999999999998764
|
Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF- |
| >cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-40 Score=302.08 Aligned_cols=237 Identities=22% Similarity=0.326 Sum_probs=197.9
Q ss_pred CCCcccceeeee-cceecccccCCCch-hhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHhHhccC
Q 014478 2 GGRCSKFSICWF-HCHLKSSVLESSDL-GETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHW 79 (424)
Q Consensus 2 G~~g~v~~~~~~-~~~v~~~~~~~~~~-~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~ 79 (424)
|++|.||.+.+. +..+++|++..... ....+.+|+.+++.++||||+++++++......++||||+++++|.+++.+.
T Consensus 17 g~~~~vy~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~ 96 (261)
T cd05148 17 GYFGEVWEGLWKNRVRVAIKILKSDDLLKQQDFQKEVQALKRLRHKHLISLFAVCSVGEPVYIITELMEKGSLLAFLRSP 96 (261)
T ss_pred CCCccEEEeEecCCCcEEEEeccccchhhHHHHHHHHHHHhcCCCcchhheeeeEecCCCeEEEEeecccCCHHHHHhcC
Confidence 899999999884 45566677665544 4667889999999999999999999999999999999999999999999765
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCCC----ccccCccCCCccc
Q 014478 80 ETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGK----SYSTNLAFTPPEY 155 (424)
Q Consensus 80 ~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~~----~~~gt~~y~aPE~ 155 (424)
.+..+++..+..++.|++.||.|||+++ ++||||||+||+++.++.+||+|||++....... ...++..|+|||.
T Consensus 97 ~~~~~~~~~~~~~~~~i~~al~~lH~~~-i~h~dl~~~nilv~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~~PE~ 175 (261)
T cd05148 97 EGQVLPVASLIDMACQVAEGMAYLEEQN-SIHRDLAARNILVGEDLVCKVADFGLARLIKEDVYLSSDKKIPYKWTAPEA 175 (261)
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHCC-eeccccCcceEEEcCCceEEEccccchhhcCCccccccCCCCceEecCHHH
Confidence 5667899999999999999999999999 9999999999999999999999999987654321 2235678999999
Q ss_pred cccCCCCCCcceehhHHHHHHHhh-CCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHHHHHHHHHhcccCcCCCCC
Q 014478 156 MRTGRVTPESVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERPN 234 (424)
Q Consensus 156 ~~~~~~~~~~Dv~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps 234 (424)
+.+..++.++||||||+++|+|++ |+.|+..... ...............+..+++.+.+++.+||..||.+|||
T Consensus 176 ~~~~~~~~~~DiwslG~~l~~l~~~g~~p~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt 250 (261)
T cd05148 176 ASHGTFSTKSDVWSFGILLYEMFTYGQVPYPGMNN-----HEVYDQITAGYRMPCPAKCPQEIYKIMLECWAAEPEDRPS 250 (261)
T ss_pred HccCCCCchhhHHHHHHHHHHHHcCCCCCCCcCCH-----HHHHHHHHhCCcCCCCCCCCHHHHHHHHHHcCCCchhCcC
Confidence 988889999999999999999998 7777755321 1111222233333455677889999999999999999999
Q ss_pred HHHHHHHHHH
Q 014478 235 AKSLVISLMS 244 (424)
Q Consensus 235 ~~~~~~~l~~ 244 (424)
+.++++.|+.
T Consensus 251 ~~~l~~~L~~ 260 (261)
T cd05148 251 FKALREELDN 260 (261)
T ss_pred HHHHHHHHhc
Confidence 9999998874
|
Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom |
| >cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-40 Score=306.31 Aligned_cols=239 Identities=16% Similarity=0.218 Sum_probs=190.7
Q ss_pred CCCCcccceeee--ecceecccccCCCc----hhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHh
Q 014478 1 MGGRCSKFSICW--FHCHLKSSVLESSD----LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAK 74 (424)
Q Consensus 1 ~G~~g~v~~~~~--~~~~v~~~~~~~~~----~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~ 74 (424)
-||||.||.+.+ .+..+++|++..+. .....+..|++++++++||||+++++++..+...++||||++|++|.+
T Consensus 3 ~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i~~~~~~~~~~~~~~lv~e~~~g~~L~~ 82 (277)
T cd05607 3 KGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSPFIVNLAYAFESKTHLCLVMSLMNGGDLKY 82 (277)
T ss_pred CCCceEEEEEEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcCCCcEEEEEEEEecCCeEEEEEecCCCCCHHH
Confidence 389999999887 46677777765332 123455679999999999999999999999999999999999999999
Q ss_pred HhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCCC---ccccCccCC
Q 014478 75 HLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGK---SYSTNLAFT 151 (424)
Q Consensus 75 ~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~~---~~~gt~~y~ 151 (424)
++.......+++..+..++.|++.||.|||+++ ++||||||+||+++.++.++|+|||++....... ...|+..|+
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~-ivH~dikp~Nili~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~y~ 161 (277)
T cd05607 83 HIYNVGERGLEMERVIHYSAQITCGILHLHSMD-IVYRDMKPENVLLDDQGNCRLSDLGLAVELKDGKTITQRAGTNGYM 161 (277)
T ss_pred HHHhccccCCCHHHHHHHHHHHHHHHHHHHHCC-EEEccCChHhEEEcCCCCEEEeeceeeeecCCCceeeccCCCCCcc
Confidence 886544557899999999999999999999999 9999999999999999999999999987655432 346889999
Q ss_pred CccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHHHHHHHHHhcccCcCC
Q 014478 152 PPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARE 231 (424)
Q Consensus 152 aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~ 231 (424)
|||++.+..++.++|||||||++|+|++|+.||...................... .....++.++.+++.+||+.||++
T Consensus 162 aPE~~~~~~~~~~~DvwslGv~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~~L~~~P~~ 240 (277)
T cd05607 162 APEILKEEPYSYPVDWFAMGCSIYEMVAGRTPFKDHKEKVAKEELKRRTLEDEVK-FEHQNFTEESKDICRLFLAKKPED 240 (277)
T ss_pred CHHHHccCCCCCchhHHHHHHHHHHHHhCCCCCCCCcchhhHHHHHHHhhccccc-cccccCCHHHHHHHHHHhccCHhh
Confidence 9999998889999999999999999999998876532111111111111111111 112346788999999999999999
Q ss_pred CCCHHHHHHH
Q 014478 232 RPNAKSLVIS 241 (424)
Q Consensus 232 Rps~~~~~~~ 241 (424)
||++.++++.
T Consensus 241 R~~~~~~~~~ 250 (277)
T cd05607 241 RLGSREKNDD 250 (277)
T ss_pred CCCCccchhh
Confidence 9999776543
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr |
| >cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.7e-40 Score=300.90 Aligned_cols=237 Identities=21% Similarity=0.266 Sum_probs=194.1
Q ss_pred CCCcccceeeeec-----ceecccccCCC--chhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHh
Q 014478 2 GGRCSKFSICWFH-----CHLKSSVLESS--DLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAK 74 (424)
Q Consensus 2 G~~g~v~~~~~~~-----~~v~~~~~~~~--~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~ 74 (424)
||||.||++.+.. ..+++|++... ......|.+|+.+++.++||||+++++++..++..++||||+++++|.+
T Consensus 15 g~~g~vy~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv~e~~~~~~L~~ 94 (266)
T cd05033 15 GEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLDFLTEASIMGQFDHPNIIRLEGVVTKSRPVMIITEYMENGSLDK 94 (266)
T ss_pred CccceEEEEEEccCCCCcceEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCcceEeEEEecCCceEEEEEcCCCCCHHH
Confidence 8999999999843 34666665433 2345678999999999999999999999999999999999999999999
Q ss_pred HhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCCC------ccccCc
Q 014478 75 HLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGK------SYSTNL 148 (424)
Q Consensus 75 ~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~~------~~~gt~ 148 (424)
++.. ....+++.++++++.|++.||.|||+++ ++||||||+||+++.++.++|+|||+++...... ...++.
T Consensus 95 ~~~~-~~~~~~~~~~~~~~~~l~~~l~~Lh~~~-i~H~di~p~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~ 172 (266)
T cd05033 95 FLRE-NDGKFTVGQLVGMLRGIASGMKYLSEMN-YVHRDLAARNILVNSNLVCKVSDFGLSRRLEDSEATYTTKGGKIPI 172 (266)
T ss_pred HHHh-ccCCCCHHHHHHHHHHHHHHHHHHHhCC-cccCCCCcceEEEcCCCCEEECccchhhcccccccceeccCCCCCc
Confidence 9865 2347899999999999999999999999 9999999999999999999999999998764211 123457
Q ss_pred cCCCccccccCCCCCCcceehhHHHHHHHhh-CCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHHHHHHHHHhccc
Q 014478 149 AFTPPEYMRTGRVTPESVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQS 227 (424)
Q Consensus 149 ~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~ 227 (424)
.|+|||.+.+..++.++||||||+++|+|++ |..|+...... ..............+..++..+.+++.+||+.
T Consensus 173 ~y~~Pe~~~~~~~~~~~Dv~slG~~l~~l~~~g~~p~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~ 247 (266)
T cd05033 173 RWTAPEAIAYRKFTSASDVWSFGIVMWEVMSYGERPYWDMSNQ-----DVIKAVEDGYRLPPPMDCPSALYQLMLDCWQK 247 (266)
T ss_pred cccChhhhccCCCccccchHHHHHHHHHHHccCCCCCCCCCHH-----HHHHHHHcCCCCCCCCCCCHHHHHHHHHHcCC
Confidence 8999999998889999999999999999998 87776543211 11222222223334556788999999999999
Q ss_pred CcCCCCCHHHHHHHHHHH
Q 014478 228 EARERPNAKSLVISLMSL 245 (424)
Q Consensus 228 dp~~Rps~~~~~~~l~~~ 245 (424)
+|++||++.+++++|..+
T Consensus 248 ~p~~Rp~~~ei~~~l~~~ 265 (266)
T cd05033 248 DRNERPTFSQIVSTLDKM 265 (266)
T ss_pred CcccCcCHHHHHHHHHhh
Confidence 999999999999999865
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment |
| >cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-40 Score=300.48 Aligned_cols=237 Identities=23% Similarity=0.329 Sum_probs=200.1
Q ss_pred CCCcccceeeeecceecccccCCCchhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHhHhccCCC
Q 014478 2 GGRCSKFSICWFHCHLKSSVLESSDLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWET 81 (424)
Q Consensus 2 G~~g~v~~~~~~~~~v~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~ 81 (424)
|++|.||.+.+.+..+++|.+.......+.+.+|+.+++.++|+||+++++++......++||||+++++|.+++.....
T Consensus 17 g~~g~v~~~~~~~~~v~iK~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~ 96 (256)
T cd05039 17 GEFGDVMLGDYRGQKVAVKCLKDDSTAAQAFLAEASVMTTLRHPNLVQLLGVVLQGNPLYIVTEYMAKGSLVDYLRSRGR 96 (256)
T ss_pred CCCceEEEEEecCcEEEEEEeccchhHHHHHHHHHHHHHhcCCcceeeeEEEEcCCCCeEEEEEecCCCcHHHHHHhcCC
Confidence 88999999999999999998876665677899999999999999999999999988889999999999999999976444
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCCCc-cccCccCCCccccccCC
Q 014478 82 QPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKS-YSTNLAFTPPEYMRTGR 160 (424)
Q Consensus 82 ~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~~~-~~gt~~y~aPE~~~~~~ 160 (424)
..+++..+..++.|++.||.|||+++ ++||||||+||+++.++.++|+|||.++....... ...+..|+|||++..+.
T Consensus 97 ~~~~~~~~~~~~~qi~~~l~~lh~~~-i~H~di~p~Nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~ape~~~~~~ 175 (256)
T cd05039 97 AVITLAQQLGFALDVCEGMEYLEEKN-FVHRDLAARNVLVSEDLVAKVSDFGLAKEASQGQDSGKLPVKWTAPEALREKK 175 (256)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHhCC-ccchhcccceEEEeCCCCEEEcccccccccccccccCCCcccccCchhhcCCc
Confidence 57999999999999999999999999 99999999999999999999999999887643322 23456799999998888
Q ss_pred CCCCcceehhHHHHHHHhh-CCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHHHHHHHHHhcccCcCCCCCHHHHH
Q 014478 161 VTPESVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERPNAKSLV 239 (424)
Q Consensus 161 ~~~~~Dv~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~~~ 239 (424)
++.++||||||+++|+|++ |..|+....... .............+..+++++.+++.+||..+|++|||+++++
T Consensus 176 ~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~ 250 (256)
T cd05039 176 FSTKSDVWSFGILLWEIYSFGRVPYPRIPLKD-----VVPHVEKGYRMEAPEGCPPEVYKVMKDCWELDPAKRPTFKQLR 250 (256)
T ss_pred CCcHHHHHHHHHHHHHHHhcCCCCCCCCCHHH-----HHHHHhcCCCCCCccCCCHHHHHHHHHHhccChhhCcCHHHHH
Confidence 9999999999999999997 887765432211 1111122223334556688999999999999999999999999
Q ss_pred HHHHH
Q 014478 240 ISLMS 244 (424)
Q Consensus 240 ~~l~~ 244 (424)
+.|+.
T Consensus 251 ~~l~~ 255 (256)
T cd05039 251 EQLAL 255 (256)
T ss_pred HHHhc
Confidence 98864
|
Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk |
| >KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-40 Score=326.03 Aligned_cols=240 Identities=16% Similarity=0.161 Sum_probs=197.2
Q ss_pred CCCcccceeeeec--ceeccccc-CCCchhhhHHHHHHHHHhcCC-CcCcceeEEEE-EeC------CeeeEEEecCCCC
Q 014478 2 GGRCSKFSICWFH--CHLKSSVL-ESSDLGETLNLEEAKAVGNLR-SERLANLIGCC-YEA------DERLLVAEFMPNE 70 (424)
Q Consensus 2 G~~g~v~~~~~~~--~~v~~~~~-~~~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~-~~~------~~~~lv~e~~~~g 70 (424)
|||+.||.+...+ ..++.|++ ..++.+.....+|+++|+.|+ |+|||.+++.. ... -+.+|.||||.||
T Consensus 48 GGFa~VYla~~~~~~~~~AlKrm~~~de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~~~~~~~~EvllLmEyC~gg 127 (738)
T KOG1989|consen 48 GGFAQVYLAQDVKGGKKYALKRMYVNDEEALNAVKREIDIMKLLSGHKNIVSYIDSSAINRSSNNGVWEVLLLMEYCKGG 127 (738)
T ss_pred CCcEEEEEEEecCCCceeeeeeeecCCHHHHHHHHHHHHHHHHhcCCCceeeEeccccccccCCCceeEEEeehhhccCC
Confidence 9999999998733 56666655 345566788899999999996 99999999943 221 2578999999999
Q ss_pred CHHhHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCC-CcccccCCCCCeeecCCCCeEEccccccccCCCCC-------
Q 014478 71 TLAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKG-RALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGK------- 142 (424)
Q Consensus 71 sL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~-~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~~------- 142 (424)
+|-+++..+....|++.++++|+.|+|+|+.+||... ||||||||-+||||+.+|..||||||.+.......
T Consensus 128 ~Lvd~mn~Rlq~~lte~eVLkIf~dv~~AVa~mH~~~pPiIHRDLKiENvLls~~g~~KLCDFGSatt~~~~~~~~~e~~ 207 (738)
T KOG1989|consen 128 SLVDFMNTRLQTRLTEDEVLKIFYDVCEAVAAMHYLKPPIIHRDLKIENVLLSADGNYKLCDFGSATTKILSPTSAQEVN 207 (738)
T ss_pred cHHHHHHHHHhccCChHHHHHHHHHHHHHHHHHhcCCCccchhhhhhhheEEcCCCCEEeCcccccccccCCCccHHHHH
Confidence 9999997655667999999999999999999999975 49999999999999999999999999876433221
Q ss_pred ------ccccCccCCCccccc---cCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhcccCCCCCchh
Q 014478 143 ------SYSTNLAFTPPEYMR---TGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDE 213 (424)
Q Consensus 143 ------~~~gt~~y~aPE~~~---~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 213 (424)
...+|+.|.|||++. +.+++.|+|||+|||+||.||....||... ....++...+.-+..+..
T Consensus 208 ~ve~eI~k~TTp~YRsPEMIDlysg~pI~eKsDIWALGclLYkLCy~t~PFe~s--------g~laIlng~Y~~P~~p~y 279 (738)
T KOG1989|consen 208 YVEEEIEKYTTPQYRSPEMIDLYSGLPIGEKSDIWALGCLLYKLCYFTTPFEES--------GKLAILNGNYSFPPFPNY 279 (738)
T ss_pred HHHHHHHhhCCccccChHHHhhhcCCCCcchhHHHHHHHHHHHHHHhCCCcCcC--------cceeEEeccccCCCCccH
Confidence 124689999999875 567999999999999999999999998753 122334444444444678
Q ss_pred HHHHHHHHHHhcccCcCCCCCHHHHHHHHHHHhhhh
Q 014478 214 GTELVRLASRCLQSEARERPNAKSLVISLMSLQKEA 249 (424)
Q Consensus 214 ~~~l~~li~~cl~~dp~~Rps~~~~~~~l~~~~~~~ 249 (424)
+..+.+||..||+.||.+||++-+++..+..+....
T Consensus 280 s~~l~~LI~~mL~~nP~~RPnI~Qv~~~~~~l~~~~ 315 (738)
T KOG1989|consen 280 SDRLKDLIRTMLQPNPDERPNIYQVLEEIFELANKP 315 (738)
T ss_pred HHHHHHHHHHHhccCcccCCCHHHHHHHHHHHhcCC
Confidence 999999999999999999999999999998887643
|
|
| >KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-40 Score=312.54 Aligned_cols=238 Identities=21% Similarity=0.289 Sum_probs=207.8
Q ss_pred CCCcccceeeeecc------eecccccCC--CchhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHH
Q 014478 2 GGRCSKFSICWFHC------HLKSSVLES--SDLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLA 73 (424)
Q Consensus 2 G~~g~v~~~~~~~~------~v~~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~ 73 (424)
|-||.||.++++.. .|++|..+. ...+.+.|+.|+-+|+.++||||++++|+|.+. ..|||||+++-|.|.
T Consensus 400 GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~t~d~tekflqEa~iMrnfdHphIikLIGv~~e~-P~WivmEL~~~GELr 478 (974)
T KOG4257|consen 400 GQFGDVYKGVYTDPEKGERIAVAVKTCKTDCTPDDTEKFLQEASIMRNFDHPHIIKLIGVCVEQ-PMWIVMELAPLGELR 478 (974)
T ss_pred CcccceeeeEecccccCcceeeeeehhccCCChhhHHHHHHHHHHHHhCCCcchhheeeeeecc-ceeEEEecccchhHH
Confidence 77899999999543 355555544 224578999999999999999999999999874 589999999999999
Q ss_pred hHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCCCcc-----ccCc
Q 014478 74 KHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSY-----STNL 148 (424)
Q Consensus 74 ~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~~~~-----~gt~ 148 (424)
.|++. +...++......++.||+.+|.|||++. +|||||...|||+....-|||+|||+++-....... .-.+
T Consensus 479 ~yLq~-nk~sL~l~tL~ly~~Qi~talaYLeSkr-fVHRDIAaRNiLVsSp~CVKLaDFGLSR~~ed~~yYkaS~~kLPI 556 (974)
T KOG4257|consen 479 EYLQQ-NKDSLPLRTLTLYCYQICTALAYLESKR-FVHRDIAARNILVSSPQCVKLADFGLSRYLEDDAYYKASRGKLPI 556 (974)
T ss_pred HHHHh-ccccchHHHHHHHHHHHHHHHHHHHhhc-hhhhhhhhhheeecCcceeeecccchhhhccccchhhccccccce
Confidence 99976 4678999999999999999999999999 999999999999999999999999999987765432 2257
Q ss_pred cCCCccccccCCCCCCcceehhHHHHHHHhh-CCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHHHHHHHHHhccc
Q 014478 149 AFTPPEYMRTGRVTPESVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQS 227 (424)
Q Consensus 149 ~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~ 227 (424)
.|||||.++...++.+||||-|||.+||+++ |..||.+ ..+..+...+...-+.+.|+.||+.|..++.+||+.
T Consensus 557 KWmaPESINfRrFTtASDVWMFgVCmWEIl~lGvkPfqg-----vkNsDVI~~iEnGeRlP~P~nCPp~LYslmskcWay 631 (974)
T KOG4257|consen 557 KWMAPESINFRRFTTASDVWMFGVCMWEILSLGVKPFQG-----VKNSDVIGHIENGERLPCPPNCPPALYSLMSKCWAY 631 (974)
T ss_pred eecCccccchhcccchhhHHHHHHHHHHHHHhcCCcccc-----ccccceEEEecCCCCCCCCCCCChHHHHHHHHHhcc
Confidence 8999999999999999999999999999876 6678877 566666667777788889999999999999999999
Q ss_pred CcCCCCCHHHHHHHHHHHhh
Q 014478 228 EARERPNAKSLVISLMSLQK 247 (424)
Q Consensus 228 dp~~Rps~~~~~~~l~~~~~ 247 (424)
||.+||.+.++...|..+..
T Consensus 632 eP~kRPrftei~~~lsdv~q 651 (974)
T KOG4257|consen 632 EPSKRPRFTEIKAILSDVLQ 651 (974)
T ss_pred CcccCCcHHHHHHHHHHHHH
Confidence 99999999999999887665
|
|
| >cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-40 Score=312.82 Aligned_cols=231 Identities=18% Similarity=0.238 Sum_probs=190.6
Q ss_pred CCCcccceeee-----ecceecccccCCCc-----hhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCC
Q 014478 2 GGRCSKFSICW-----FHCHLKSSVLESSD-----LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNET 71 (424)
Q Consensus 2 G~~g~v~~~~~-----~~~~v~~~~~~~~~-----~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gs 71 (424)
|+||.||.+.. .+..+++|++.... .....+.+|+.+|+.++||||+++++++..++..++||||+++|+
T Consensus 7 G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~ 86 (323)
T cd05584 7 GGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIVDLIYAFQTGGKLYLILEYLSGGE 86 (323)
T ss_pred cCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCCchhceeeEEecCCeEEEEEeCCCCch
Confidence 89999999875 35567777765322 234567789999999999999999999999999999999999999
Q ss_pred HHhHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCC----CccccC
Q 014478 72 LAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG----KSYSTN 147 (424)
Q Consensus 72 L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~----~~~~gt 147 (424)
|.+++.. ...+++..+..++.|++.||.|||+++ |+||||||+|||++.++.+||+|||+++..... ....||
T Consensus 87 L~~~~~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~-ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt 163 (323)
T cd05584 87 LFMHLER--EGIFMEDTACFYLSEISLALEHLHQQG-IIYRDLKPENILLDAQGHVKLTDFGLCKESIHEGTVTHTFCGT 163 (323)
T ss_pred HHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCCHHHeEECCCCCEEEeeCcCCeecccCCCcccccCCC
Confidence 9999864 456889999999999999999999999 999999999999999999999999998753322 234689
Q ss_pred ccCCCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHHHHHHHHHhccc
Q 014478 148 LAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQS 227 (424)
Q Consensus 148 ~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~ 227 (424)
+.|+|||++.+..++.++|||||||++|||++|+.||....... ........ ....+..+++++.++|.+||+.
T Consensus 164 ~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~pf~~~~~~~----~~~~~~~~--~~~~~~~~~~~~~~li~~~l~~ 237 (323)
T cd05584 164 IEYMAPEILMRSGHGKAVDWWSLGALMYDMLTGAPPFTAENRKK----TIDKILKG--KLNLPPYLTPEARDLLKKLLKR 237 (323)
T ss_pred ccccChhhccCCCCCCcceecccHHHHHHHhcCCCCCCCCCHHH----HHHHHHcC--CCCCCCCCCHHHHHHHHHHccc
Confidence 99999999998889999999999999999999998887542211 11111111 2234566788999999999999
Q ss_pred CcCCCC-----CHHHHHHH
Q 014478 228 EARERP-----NAKSLVIS 241 (424)
Q Consensus 228 dp~~Rp-----s~~~~~~~ 241 (424)
||++|| ++.+++.+
T Consensus 238 ~p~~R~~~~~~~~~~l~~h 256 (323)
T cd05584 238 NPSSRLGAGPGDAAEVQSH 256 (323)
T ss_pred CHhHcCCCCCCCHHHHhcC
Confidence 999999 78888775
|
Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in |
| >cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.3e-40 Score=299.34 Aligned_cols=236 Identities=21% Similarity=0.299 Sum_probs=194.7
Q ss_pred CCCcccceeeeecceecccccCCCchhhhHHHHHHHHHhcCCCcCcceeEEEEEe-CCeeeEEEecCCCCCHHhHhccCC
Q 014478 2 GGRCSKFSICWFHCHLKSSVLESSDLGETLNLEEAKAVGNLRSERLANLIGCCYE-ADERLLVAEFMPNETLAKHLFHWE 80 (424)
Q Consensus 2 G~~g~v~~~~~~~~~v~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-~~~~~lv~e~~~~gsL~~~l~~~~ 80 (424)
||+|.||.+.+.+..+++|...... ..+.|.+|+.++++++|+||+++++++.. ++..+++|||+++++|.+++....
T Consensus 17 g~~~~v~~~~~~~~~~~~k~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~ 95 (256)
T cd05082 17 GEFGDVMLGDYRGNKVAVKCIKNDA-TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRG 95 (256)
T ss_pred cCCCeEEEEEEcCCcEEEEEeCCCc-hHHHHHHHHHHHHhCCCCCeeeEEEEEEcCCCceEEEEECCCCCcHHHHHHhcC
Confidence 8899999998888888887775443 35678999999999999999999998654 456899999999999999997644
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCCC-ccccCccCCCccccccC
Q 014478 81 TQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGK-SYSTNLAFTPPEYMRTG 159 (424)
Q Consensus 81 ~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~~-~~~gt~~y~aPE~~~~~ 159 (424)
...+++..++.++.|++.||.|||+++ ++||||||+||+++.++.+||+|||+++...... ...++..|+|||++.+.
T Consensus 96 ~~~~~~~~~~~~~~~i~~~l~~lH~~~-i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~y~aPE~~~~~ 174 (256)
T cd05082 96 RSVLGGDCLLKFSLDVCEAMEYLEANN-FVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWTAPEALREK 174 (256)
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHhCC-EeccccchheEEEcCCCcEEecCCccceeccccCCCCccceeecCHHHHccC
Confidence 456899999999999999999999999 9999999999999999999999999988654332 33456789999999888
Q ss_pred CCCCCcceehhHHHHHHHhh-CCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHHHHHHHHHhcccCcCCCCCHHHH
Q 014478 160 RVTPESVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERPNAKSL 238 (424)
Q Consensus 160 ~~~~~~Dv~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~~ 238 (424)
.++.++|||||||++|+|++ |+.|++...... ....+........+..+++.+.+++.+||..+|++|||+.++
T Consensus 175 ~~~~~~Dv~slG~i~~~l~~~g~~p~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l 249 (256)
T cd05082 175 KFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKD-----VVPRVEKGYKMDAPDGCPPVVYDVMKQCWHLDAATRPSFLQL 249 (256)
T ss_pred CCCchhhhHHHHHHHHHHHhCCCCCCCCCCHHH-----HHHHHhcCCCCCCCCCCCHHHHHHHHHHhcCChhhCcCHHHH
Confidence 89999999999999999997 887766432211 111122222334455678899999999999999999999999
Q ss_pred HHHHHH
Q 014478 239 VISLMS 244 (424)
Q Consensus 239 ~~~l~~ 244 (424)
++.|..
T Consensus 250 ~~~l~~ 255 (256)
T cd05082 250 REQLEH 255 (256)
T ss_pred HHHHhc
Confidence 998864
|
Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re |
| >cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.4e-40 Score=303.46 Aligned_cols=241 Identities=21% Similarity=0.268 Sum_probs=194.2
Q ss_pred CCCcccceeeeec-------ceecccccCCCc-hhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHH
Q 014478 2 GGRCSKFSICWFH-------CHLKSSVLESSD-LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLA 73 (424)
Q Consensus 2 G~~g~v~~~~~~~-------~~v~~~~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~ 73 (424)
||+|.||.+.+.+ ..++++.+.... ...+.+.+|+.++++++||||+++++++......++||||+++++|.
T Consensus 16 g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~ 95 (291)
T cd05094 16 GAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKFYGVCGDGDPLIMVFEYMKHGDLN 95 (291)
T ss_pred cCCCeEEEeEeeccCCCCcceeeEEEecCCccHHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCceEEEEecCCCCcHH
Confidence 8899999987633 235555554433 23467889999999999999999999999999999999999999999
Q ss_pred hHhccCC--------------CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCC
Q 014478 74 KHLFHWE--------------TQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSR 139 (424)
Q Consensus 74 ~~l~~~~--------------~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~ 139 (424)
+++.... ...+++..++.++.||+.||.|||+++ ++||||||+||+++.++.++|+|||+++...
T Consensus 96 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~-i~H~dlkp~Nil~~~~~~~~l~dfg~a~~~~ 174 (291)
T cd05094 96 KFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQH-FVHRDLATRNCLVGANLLVKIGDFGMSRDVY 174 (291)
T ss_pred HHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHhCC-eeecccCcceEEEccCCcEEECCCCcccccC
Confidence 9986421 234889999999999999999999999 9999999999999999999999999987543
Q ss_pred CC------CccccCccCCCccccccCCCCCCcceehhHHHHHHHhh-CCCCCCchhhHHHhhhhhhHhhhcccCCCCCch
Q 014478 140 DG------KSYSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKNFLLLMDSALEGHFSND 212 (424)
Q Consensus 140 ~~------~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 212 (424)
.. ....++..|+|||++.+..++.++|||||||++|||++ |..|+....... .............+..
T Consensus 175 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~-----~~~~~~~~~~~~~~~~ 249 (291)
T cd05094 175 STDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNTE-----VIECITQGRVLERPRV 249 (291)
T ss_pred CCceeecCCCCCcceeecChHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHH-----HHHHHhCCCCCCCCcc
Confidence 32 22345778999999998889999999999999999998 887765432111 1111222222233445
Q ss_pred hHHHHHHHHHHhcccCcCCCCCHHHHHHHHHHHhhh
Q 014478 213 EGTELVRLASRCLQSEARERPNAKSLVISLMSLQKE 248 (424)
Q Consensus 213 ~~~~l~~li~~cl~~dp~~Rps~~~~~~~l~~~~~~ 248 (424)
++..+.+++.+||..||++|||+.++++.|..+.+.
T Consensus 250 ~~~~~~~li~~~l~~~P~~Rpt~~~v~~~l~~~~~~ 285 (291)
T cd05094 250 CPKEVYDIMLGCWQREPQQRLNIKEIYKILHALGKA 285 (291)
T ss_pred CCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHHhh
Confidence 678899999999999999999999999999988653
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n |
| >cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-40 Score=312.45 Aligned_cols=236 Identities=13% Similarity=0.212 Sum_probs=189.9
Q ss_pred CCCcccceeee--ecceecccccCCCc----hhhhHHHHHHHHHhcC-CCcCcceeEEEEEeCCeeeEEEecCCCCCHHh
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESSD----LGETLNLEEAKAVGNL-RSERLANLIGCCYEADERLLVAEFMPNETLAK 74 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~~----~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~ 74 (424)
|++|.||.+.+ .+..+++|++.... .....+..|..++..+ +||||+++++++...+..++||||++||+|.+
T Consensus 6 G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~~~~~~lv~e~~~~g~L~~ 85 (329)
T cd05588 6 GSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQTESRLFFVIEFVSGGDLMF 85 (329)
T ss_pred CCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEEEcCCEEEEEEeCCCCCCHHH
Confidence 89999999987 45667877775432 2345678899999998 79999999999999999999999999999999
Q ss_pred HhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCC----CCccccCccC
Q 014478 75 HLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRD----GKSYSTNLAF 150 (424)
Q Consensus 75 ~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~----~~~~~gt~~y 150 (424)
++.. ...+++..+..++.|++.||.|||+++ ++||||||+|||++.++.+||+|||+++.... .....||+.|
T Consensus 86 ~~~~--~~~l~~~~~~~~~~qi~~~l~~lH~~~-ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~~~~~~~~~gt~~y 162 (329)
T cd05588 86 HMQR--QRKLPEEHARFYSAEISLALNFLHERG-IIYRDLKLDNVLLDAEGHIKLTDYGMCKEGIRPGDTTSTFCGTPNY 162 (329)
T ss_pred HHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-eEecCCCHHHeEECCCCCEEECcCccccccccCCCccccccCCccc
Confidence 8864 467999999999999999999999999 99999999999999999999999999875321 2345689999
Q ss_pred CCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHH----hhhhhhHhhhcccCCCCCchhHHHHHHHHHHhcc
Q 014478 151 TPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLI----RSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQ 226 (424)
Q Consensus 151 ~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~ 226 (424)
+|||++.+..++.++|+|||||++|+|++|+.||........ ........+.. .....|..++.++.+++.+||+
T Consensus 163 ~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~-~~~~~p~~~~~~~~~li~~~L~ 241 (329)
T cd05588 163 IAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGMSDNPDQNTEDYLFQVILE-KQIRIPRSLSVKASSVLKGFLN 241 (329)
T ss_pred cCHHHHcCCCCCCccceechHHHHHHHHHCCCCcccccccccccccchHHHHHHHHc-CCCCCCCCCCHHHHHHHHHHhc
Confidence 999999988899999999999999999999988753110000 00001111111 1223455678899999999999
Q ss_pred cCcCCCCC------HHHHHHH
Q 014478 227 SEARERPN------AKSLVIS 241 (424)
Q Consensus 227 ~dp~~Rps------~~~~~~~ 241 (424)
.||.+||| +++++.+
T Consensus 242 ~dP~~R~~~~~~~~~~~i~~h 262 (329)
T cd05588 242 KDPKERLGCHPQTGFRDIKSH 262 (329)
T ss_pred cCHHHcCCCCCCCCHHHHhcC
Confidence 99999997 5677654
|
Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl |
| >PLN00034 mitogen-activated protein kinase kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-40 Score=316.03 Aligned_cols=232 Identities=15% Similarity=0.161 Sum_probs=186.0
Q ss_pred CCCcccceeee--ecceecccccCCCc--hhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHhHhc
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESSD--LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLF 77 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~~--~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~ 77 (424)
|++|.||.+.+ .+..+++|++.... .....+.+|+++++.++|+||+++++++..++..++||||+++|+|....
T Consensus 85 G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~- 163 (353)
T PLN00034 85 GAGGTVYKVIHRPTGRLYALKVIYGNHEDTVRRQICREIEILRDVNHPNVVKCHDMFDHNGEIQVLLEFMDGGSLEGTH- 163 (353)
T ss_pred CCCeEEEEEEECCCCCEEEEEEEecCCcHHHHHHHHHHHHHHHhCCCCCcceeeeEeccCCeEEEEEecCCCCcccccc-
Confidence 89999999987 46778888775433 33567889999999999999999999999999999999999999986532
Q ss_pred cCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCC----CccccCccCCCc
Q 014478 78 HWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG----KSYSTNLAFTPP 153 (424)
Q Consensus 78 ~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~----~~~~gt~~y~aP 153 (424)
..++..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++..... ....||..|+||
T Consensus 164 -----~~~~~~~~~i~~qi~~aL~~LH~~~-ivHrDlkp~NIll~~~~~~kL~DfG~~~~~~~~~~~~~~~~gt~~y~aP 237 (353)
T PLN00034 164 -----IADEQFLADVARQILSGIAYLHRRH-IVHRDIKPSNLLINSAKNVKIADFGVSRILAQTMDPCNSSVGTIAYMSP 237 (353)
T ss_pred -----cCCHHHHHHHHHHHHHHHHHHHHCC-EeecCCCHHHEEEcCCCCEEEcccccceecccccccccccccCccccCc
Confidence 3567788899999999999999999 999999999999999999999999998865432 345689999999
Q ss_pred cccccC-----CCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHHHHHHHHHhcccC
Q 014478 154 EYMRTG-----RVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSE 228 (424)
Q Consensus 154 E~~~~~-----~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~d 228 (424)
|++... ..+.++|||||||++|||++|+.||.......+... ............+..++.++.+||.+||..|
T Consensus 238 E~~~~~~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~ 315 (353)
T PLN00034 238 ERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFPFGVGRQGDWASL--MCAICMSQPPEAPATASREFRHFISCCLQRE 315 (353)
T ss_pred cccccccccCcCCCcchhHHHHHHHHHHHHhCCCCCCCCCCccHHHH--HHHHhccCCCCCCCccCHHHHHHHHHHccCC
Confidence 988532 245689999999999999999988863211111111 1111111222344567889999999999999
Q ss_pred cCCCCCHHHHHHHH
Q 014478 229 ARERPNAKSLVISL 242 (424)
Q Consensus 229 p~~Rps~~~~~~~l 242 (424)
|++|||+.+++++-
T Consensus 316 P~~Rpt~~ell~hp 329 (353)
T PLN00034 316 PAKRWSAMQLLQHP 329 (353)
T ss_pred hhhCcCHHHHhcCc
Confidence 99999999999763
|
|
| >cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.8e-40 Score=303.07 Aligned_cols=236 Identities=20% Similarity=0.279 Sum_probs=192.5
Q ss_pred CCCcccceeeeec-------ceecccccCCCch--hhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCH
Q 014478 2 GGRCSKFSICWFH-------CHLKSSVLESSDL--GETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETL 72 (424)
Q Consensus 2 G~~g~v~~~~~~~-------~~v~~~~~~~~~~--~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL 72 (424)
||+|.||.+.+.. ..+++|++..... ..+.|.+|+++++.++||||+++++++..+...++||||+++++|
T Consensus 16 g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L 95 (280)
T cd05049 16 GAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNFQHENIVKFYGVCTEGDPPIMVFEYMEHGDL 95 (280)
T ss_pred cCCceEeeeeeccccCcCCcceEEEEeecccCCHHHHHHHHHHHHHHHhcCCCCchheeeEEecCCCeEEEEecCCCCCH
Confidence 8899999987632 4566776654432 357899999999999999999999999999999999999999999
Q ss_pred HhHhccCC------------CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCC
Q 014478 73 AKHLFHWE------------TQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRD 140 (424)
Q Consensus 73 ~~~l~~~~------------~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~ 140 (424)
.+++.... ...+++.++..++.|++.||.|||+++ ++||||||+||+++.++.+||+|||+++....
T Consensus 96 ~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~-i~h~dlkp~nili~~~~~~kl~d~g~~~~~~~ 174 (280)
T cd05049 96 NKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLASQH-FVHRDLATRNCLVGYDLVVKIGDFGMSRDVYT 174 (280)
T ss_pred HHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhhCC-eeccccccceEEEcCCCeEEECCcccceeccc
Confidence 99996421 235788999999999999999999999 99999999999999999999999999875432
Q ss_pred C------CccccCccCCCccccccCCCCCCcceehhHHHHHHHhh-CCCCCCchhhHHHhhhhhhHhhhcccCCCCCchh
Q 014478 141 G------KSYSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDE 213 (424)
Q Consensus 141 ~------~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 213 (424)
. ....+++.|+|||.+.++.++.++|||||||++|||++ |..||....... .............+..+
T Consensus 175 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~e~~~~g~~p~~~~~~~~-----~~~~~~~~~~~~~~~~~ 249 (280)
T cd05049 175 TDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVVLWEIFTYGKQPWYGLSNEE-----VIECITQGRLLQRPRTC 249 (280)
T ss_pred CcceecCCCCcccceecChhhhccCCcchhhhHHHHHHHHHHHHhcCCCCCCCCCHHH-----HHHHHHcCCcCCCCCCC
Confidence 2 22334678999999998899999999999999999998 887776532211 11122222223334567
Q ss_pred HHHHHHHHHHhcccCcCCCCCHHHHHHHHH
Q 014478 214 GTELVRLASRCLQSEARERPNAKSLVISLM 243 (424)
Q Consensus 214 ~~~l~~li~~cl~~dp~~Rps~~~~~~~l~ 243 (424)
+..+.+++.+||..||++||++.++++.|.
T Consensus 250 ~~~~~~li~~~l~~~p~~Rp~~~eil~~l~ 279 (280)
T cd05049 250 PSEVYDIMLGCWKRDPQQRINIKDIHERLQ 279 (280)
T ss_pred CHHHHHHHHHHcCCCcccCCCHHHHHHHhh
Confidence 889999999999999999999999998875
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt |
| >cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.6e-40 Score=298.65 Aligned_cols=236 Identities=23% Similarity=0.321 Sum_probs=193.8
Q ss_pred CCCcccceeee-ecceecccccCCCchhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHhHhccCC
Q 014478 2 GGRCSKFSICW-FHCHLKSSVLESSDLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWE 80 (424)
Q Consensus 2 G~~g~v~~~~~-~~~~v~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~ 80 (424)
||+|.||.+.+ .+..+++|.+.......+.|.+|+.++++++|+||+++++++.. ...+++|||+++++|.+++....
T Consensus 17 g~~~~v~~~~~~~~~~~~~k~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~-~~~~lv~e~~~~~~L~~~~~~~~ 95 (260)
T cd05070 17 GQFGEVWMGTWNGNTKVAVKTLKPGTMSPESFLEEAQIMKKLRHDKLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLKDGE 95 (260)
T ss_pred ccCceEEEEEecCCceeEEEEecCCCCCHHHHHHHHHHHHhcCCCceEEEEeEECC-CCcEEEEEecCCCcHHHHHHhcC
Confidence 89999999987 34567777776665566789999999999999999999998854 56889999999999999997544
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCCC-----ccccCccCCCccc
Q 014478 81 TQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGK-----SYSTNLAFTPPEY 155 (424)
Q Consensus 81 ~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~~-----~~~gt~~y~aPE~ 155 (424)
...+++.++..++.|++.||.|||+++ ++||||||+||++++++.++|+|||++....... ...++..|+|||.
T Consensus 96 ~~~~~~~~~~~~~~~l~~al~~lH~~~-i~H~di~p~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~ 174 (260)
T cd05070 96 GRALKLPNLVDMAAQVAAGMAYIERMN-YIHRDLRSANILVGDGLVCKIADFGLARLIEDNEYTARQGAKFPIKWTAPEA 174 (260)
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCccceEEEeCCceEEeCCceeeeeccCcccccccCCCCCccccChHH
Confidence 556899999999999999999999999 9999999999999999999999999987654321 2234567999999
Q ss_pred cccCCCCCCcceehhHHHHHHHhh-CCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHHHHHHHHHhcccCcCCCCC
Q 014478 156 MRTGRVTPESVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERPN 234 (424)
Q Consensus 156 ~~~~~~~~~~Dv~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps 234 (424)
+.+..++.++||||||+++|+|++ |..||...... ..............+...+..+.+++.+||..||++|||
T Consensus 175 ~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt 249 (260)
T cd05070 175 ALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNNR-----EVLEQVERGYRMPCPQDCPISLHELMLQCWKKDPEERPT 249 (260)
T ss_pred HhcCCCcchhhhHHHHHHHHHHHhcCCCCCCCCCHH-----HHHHHHHcCCCCCCCCcCCHHHHHHHHHHcccCcccCcC
Confidence 988889999999999999999999 77776553211 111222222333445567889999999999999999999
Q ss_pred HHHHHHHHHH
Q 014478 235 AKSLVISLMS 244 (424)
Q Consensus 235 ~~~~~~~l~~ 244 (424)
+.++.+.|+.
T Consensus 250 ~~~l~~~l~~ 259 (260)
T cd05070 250 FEYLQSFLED 259 (260)
T ss_pred HHHHHHHHhc
Confidence 9999988764
|
Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r |
| >cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-39 Score=298.27 Aligned_cols=237 Identities=23% Similarity=0.300 Sum_probs=193.1
Q ss_pred CCCcccceeeeec-ceecccccCCCchhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHhHhccCC
Q 014478 2 GGRCSKFSICWFH-CHLKSSVLESSDLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWE 80 (424)
Q Consensus 2 G~~g~v~~~~~~~-~~v~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~ 80 (424)
|++|.||.+.+.+ ..+++|++.......+.|.+|+++++.++||||+++++++.. ...++||||+++|+|.+++....
T Consensus 17 g~~~~v~~~~~~~~~~valK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~-~~~~lv~e~~~~~~L~~~~~~~~ 95 (262)
T cd05071 17 GCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLKGEM 95 (262)
T ss_pred CCCCcEEEEEecCCceEEEEecccCccCHHHHHHHHHHHHhCCCCCcceEEEEECC-CCcEEEEEcCCCCcHHHHHhhcc
Confidence 8899999998744 357777776655556789999999999999999999998754 45789999999999999997544
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCCC-----ccccCccCCCccc
Q 014478 81 TQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGK-----SYSTNLAFTPPEY 155 (424)
Q Consensus 81 ~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~~-----~~~gt~~y~aPE~ 155 (424)
+..+++..+..++.|++.||.|||+++ ++||||||+||+++.++.++|+|||.++...... ...++..|+|||+
T Consensus 96 ~~~~~~~~~~~~~~~l~~aL~~lH~~~-i~H~dl~p~Nill~~~~~~~L~dfg~~~~~~~~~~~~~~~~~~~~~y~~PE~ 174 (262)
T cd05071 96 GKYLRLPQLVDMAAQIASGMAYVERMN-YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEA 174 (262)
T ss_pred ccCCCHHHHHHHHHHHHHHHHHHHHCC-ccccccCcccEEEcCCCcEEeccCCceeeccccccccccCCcccceecCHhH
Confidence 456899999999999999999999999 9999999999999999999999999987654322 2235678999999
Q ss_pred cccCCCCCCcceehhHHHHHHHhh-CCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHHHHHHHHHhcccCcCCCCC
Q 014478 156 MRTGRVTPESVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERPN 234 (424)
Q Consensus 156 ~~~~~~~~~~Dv~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps 234 (424)
+.+..++.++|||||||++|+|++ |..||....... .............+..++..+.+++.+||+.||++|||
T Consensus 175 ~~~~~~~~~~DvwslG~~l~ellt~g~~p~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rp~ 249 (262)
T cd05071 175 ALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNRE-----VLDQVERGYRMPCPPECPESLHDLMCQCWRKEPEERPT 249 (262)
T ss_pred hccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCChHH-----HHHHHhcCCCCCCccccCHHHHHHHHHHccCCcccCCC
Confidence 988889999999999999999999 666665432111 11111122222334567889999999999999999999
Q ss_pred HHHHHHHHHHH
Q 014478 235 AKSLVISLMSL 245 (424)
Q Consensus 235 ~~~~~~~l~~~ 245 (424)
+.++++.|+..
T Consensus 250 ~~~~~~~l~~~ 260 (262)
T cd05071 250 FEYLQAFLEDY 260 (262)
T ss_pred HHHHHHHHHHh
Confidence 99999998764
|
Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo |
| >cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.5e-40 Score=298.79 Aligned_cols=234 Identities=23% Similarity=0.324 Sum_probs=191.6
Q ss_pred CCCcccceeeeec-ceecccccCCCchhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHhHhccCC
Q 014478 2 GGRCSKFSICWFH-CHLKSSVLESSDLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWE 80 (424)
Q Consensus 2 G~~g~v~~~~~~~-~~v~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~ 80 (424)
|++|.||.+.+.. ..+++|++.........|.+|+.+++.++||||+++++++...+..++||||++|++|.+++...
T Consensus 15 G~~~~v~~~~~~~~~~~~iK~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~- 93 (256)
T cd05059 15 GQFGVVHLGKWRGKIDVAIKMIREGAMSEDDFIEEAKVMMKLSHPNLVQLYGVCTKQRPIFIVTEYMANGCLLNYLRER- 93 (256)
T ss_pred CCCceEEEeEecCCccEEEEEeccCCCCHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCceEEEEecCCCCCHHHHHHhc-
Confidence 8899999998744 35677776655555667899999999999999999999999999999999999999999998652
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCCCc-----cccCccCCCccc
Q 014478 81 TQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKS-----YSTNLAFTPPEY 155 (424)
Q Consensus 81 ~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~~~-----~~gt~~y~aPE~ 155 (424)
...+++..++.++.|++.||.|||+++ ++||||||+||+++.++.+||+|||+++....... ..++..|+|||.
T Consensus 94 ~~~~~~~~~~~i~~qi~~~l~~lH~~~-i~H~dl~p~ni~i~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~y~~Pe~ 172 (256)
T cd05059 94 KGKLGTEWLLDMCSDVCEAMEYLESNG-FIHRDLAARNCLVGEDNVVKVSDFGLARYVLDDQYTSSQGTKFPVKWAPPEV 172 (256)
T ss_pred ccCCCHHHHHHHHHHHHHHHHHHHHCC-cccccccHhhEEECCCCcEEECCcccceecccccccccCCCCCCccccCHHH
Confidence 347899999999999999999999999 99999999999999999999999999876543221 123457999999
Q ss_pred cccCCCCCCcceehhHHHHHHHhh-CCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHHHHHHHHHhcccCcCCCCC
Q 014478 156 MRTGRVTPESVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERPN 234 (424)
Q Consensus 156 ~~~~~~~~~~Dv~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps 234 (424)
+.+..++.++||||||+++|+|++ |..||...... ..............+..++.++.+++.+||..+|++|||
T Consensus 173 ~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt 247 (256)
T cd05059 173 FDYSRFSSKSDVWSFGVLMWEVFSEGKMPYERFSNS-----EVVESVSAGYRLYRPKLAPTEVYTIMYSCWHEKPEDRPA 247 (256)
T ss_pred hccCCCCchhhHHHHHHHHHHHhccCCCCCCCCCHH-----HHHHHHHcCCcCCCCCCCCHHHHHHHHHHhcCChhhCcC
Confidence 998889999999999999999999 67666442111 111122222233445567889999999999999999999
Q ss_pred HHHHHHHH
Q 014478 235 AKSLVISL 242 (424)
Q Consensus 235 ~~~~~~~l 242 (424)
+.++++.|
T Consensus 248 ~~~~l~~l 255 (256)
T cd05059 248 FKKLLSQL 255 (256)
T ss_pred HHHHHHHh
Confidence 99999875
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows |
| >cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.8e-40 Score=303.18 Aligned_cols=237 Identities=19% Similarity=0.252 Sum_probs=190.9
Q ss_pred CCCcccceeee------ecceecccccCCCc--hhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHH
Q 014478 2 GGRCSKFSICW------FHCHLKSSVLESSD--LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLA 73 (424)
Q Consensus 2 G~~g~v~~~~~------~~~~v~~~~~~~~~--~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~ 73 (424)
||||.||.+.+ .+..+++|.+.... .....|.+|+.+++.++||||+++++++..+...++||||+++++|.
T Consensus 16 g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~ 95 (283)
T cd05090 16 CAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQWGEFQQEASLMAELHHPNIVCLLGVVTQEQPVCMLFEYLNQGDLH 95 (283)
T ss_pred cCCcceEEEEEecCCCCCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCCeeeEEEEEecCCceEEEEEcCCCCcHH
Confidence 89999999886 22446666654322 23467889999999999999999999999999999999999999999
Q ss_pred hHhccCC---------------CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccC
Q 014478 74 KHLFHWE---------------TQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNS 138 (424)
Q Consensus 74 ~~l~~~~---------------~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~ 138 (424)
+++.... ...+++.+++.++.|++.||.|||+++ ++||||||+||+++.++.+||+|||+++..
T Consensus 96 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~-i~H~dlkp~nili~~~~~~kl~dfg~~~~~ 174 (283)
T cd05090 96 EFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSSHF-FVHKDLAARNILIGEQLHVKISDLGLSREI 174 (283)
T ss_pred HHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHhcC-eehhccccceEEEcCCCcEEeccccccccc
Confidence 9984211 234788999999999999999999999 999999999999999999999999998765
Q ss_pred CCC------CccccCccCCCccccccCCCCCCcceehhHHHHHHHhh-CCCCCCchhhHHHhhhhhhHhhhcccCCCCCc
Q 014478 139 RDG------KSYSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKNFLLLMDSALEGHFSN 211 (424)
Q Consensus 139 ~~~------~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 211 (424)
... ....++..|+|||++.+..++.++|||||||++|||++ |..||..... ......+........+.
T Consensus 175 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~g~~p~~~~~~-----~~~~~~~~~~~~~~~~~ 249 (283)
T cd05090 175 YSADYYRVQPKSLLPIRWMPPEAIMYGKFSSDSDIWSFGVVLWEIFSFGLQPYYGFSN-----QEVIEMVRKRQLLPCSE 249 (283)
T ss_pred cCCcceecccCCCccceecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCH-----HHHHHHHHcCCcCCCCC
Confidence 322 22345678999999988889999999999999999998 7767654321 11222222222334556
Q ss_pred hhHHHHHHHHHHhcccCcCCCCCHHHHHHHHHH
Q 014478 212 DEGTELVRLASRCLQSEARERPNAKSLVISLMS 244 (424)
Q Consensus 212 ~~~~~l~~li~~cl~~dp~~Rps~~~~~~~l~~ 244 (424)
.+++++.+++.+||+.||++||++.++++.|..
T Consensus 250 ~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~~ 282 (283)
T cd05090 250 DCPPRMYSLMTECWQEGPSRRPRFKDIHTRLRS 282 (283)
T ss_pred CCCHHHHHHHHHHcccCcccCcCHHHHHHHhhc
Confidence 678899999999999999999999999988753
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly |
| >cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.5e-40 Score=310.25 Aligned_cols=242 Identities=19% Similarity=0.308 Sum_probs=192.8
Q ss_pred CCCCcccceeeeec-------ceecccccCCCc--hhhhHHHHHHHHHhcC-CCcCcceeEEEEEeC-CeeeEEEecCCC
Q 014478 1 MGGRCSKFSICWFH-------CHLKSSVLESSD--LGETLNLEEAKAVGNL-RSERLANLIGCCYEA-DERLLVAEFMPN 69 (424)
Q Consensus 1 ~G~~g~v~~~~~~~-------~~v~~~~~~~~~--~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~-~~~~lv~e~~~~ 69 (424)
.||||.||.+.+.+ ..+++|++.... ...+.+..|+.++.++ +|+||++++++|... ...+++|||+++
T Consensus 17 ~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~~~~l~~h~niv~~~~~~~~~~~~~~~v~ey~~~ 96 (337)
T cd05054 17 RGAFGKVIQASAFGIEKSASCRTVAVKMLKEGATASEYKALMTELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEYCKF 96 (337)
T ss_pred cCcCceEEeccccccccccccceeeeeeccCCCCHHHHHHHHHHHHHHHhhccCcchhheeeeEecCCCCEEEEEecCCC
Confidence 48999999987643 457777765322 2345678899999999 899999999988654 567899999999
Q ss_pred CCHHhHhccCC-----------------------------------------------------------CCCCCHHHHH
Q 014478 70 ETLAKHLFHWE-----------------------------------------------------------TQPMKWAMRL 90 (424)
Q Consensus 70 gsL~~~l~~~~-----------------------------------------------------------~~~l~~~~~~ 90 (424)
|+|.+++.... ..++++..+.
T Consensus 97 ~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 176 (337)
T cd05054 97 GNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSDVEEDEEGDELYKEPLTLEDLI 176 (337)
T ss_pred CCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchhhcccchhhhHHhhcCCCHHHHH
Confidence 99999885321 1268899999
Q ss_pred HHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCC------CccccCccCCCccccccCCCCCC
Q 014478 91 RVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG------KSYSTNLAFTPPEYMRTGRVTPE 164 (424)
Q Consensus 91 ~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~------~~~~gt~~y~aPE~~~~~~~~~~ 164 (424)
.++.||+.||.|||+++ |+||||||+||+++.++.++|+|||+++..... ....++..|+|||++.+..++.+
T Consensus 177 ~~~~qi~~aL~~lH~~~-ivHrDikp~Nill~~~~~vkL~DfG~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~ 255 (337)
T cd05054 177 SYSFQVARGMEFLASRK-CIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPESIFDKVYTTQ 255 (337)
T ss_pred HHHHHHHHHHHHHHhCC-eecCCCCcceEEEeCCCcEEEeccccchhcccCcchhhccCCCCCccccCcHHhcCCCCCcc
Confidence 99999999999999999 999999999999999999999999999865322 22345678999999998999999
Q ss_pred cceehhHHHHHHHhh-CCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHHHHHHHHHhcccCcCCCCCHHHHHHHHH
Q 014478 165 SVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERPNAKSLVISLM 243 (424)
Q Consensus 165 ~Dv~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~~~~~l~ 243 (424)
+|||||||++|||++ |..||...... ...............+...++++.+++.+||+.+|++||++.+++++|.
T Consensus 256 ~Di~SlGv~l~el~t~g~~p~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~ell~~l~ 331 (337)
T cd05054 256 SDVWSFGVLLWEIFSLGASPYPGVQID----EEFCRRLKEGTRMRAPEYATPEIYSIMLDCWHNNPEDRPTFSELVEILG 331 (337)
T ss_pred ccHHHHHHHHHHHHHcCCCCCCCCCcc----HHHHHHHhccCCCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHH
Confidence 999999999999998 88777542111 1111122222233344556789999999999999999999999999999
Q ss_pred HHhh
Q 014478 244 SLQK 247 (424)
Q Consensus 244 ~~~~ 247 (424)
.+..
T Consensus 332 ~~~~ 335 (337)
T cd05054 332 DLLQ 335 (337)
T ss_pred HHHh
Confidence 8765
|
Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto |
| >KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.9e-41 Score=286.47 Aligned_cols=207 Identities=19% Similarity=0.242 Sum_probs=175.3
Q ss_pred hhHHHHHHHHHhcC-CCcCcceeEEEEEeCCeeeEEEecCCCCCHHhHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 014478 29 ETLNLEEAKAVGNL-RSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKG 107 (424)
Q Consensus 29 ~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~ 107 (424)
.+.-.+|+.+|+++ .||||+.+.++++.+...++|+|.|+.|.|.|++.+ .-.+++....+|++|+.+|++|||.++
T Consensus 66 ~EaT~~Ev~ILRqv~GHP~II~l~D~yes~sF~FlVFdl~prGELFDyLts--~VtlSEK~tR~iMrqlfegVeylHa~~ 143 (411)
T KOG0599|consen 66 REATRQEISILRQVMGHPYIIDLQDVYESDAFVFLVFDLMPRGELFDYLTS--KVTLSEKETRRIMRQLFEGVEYLHARN 143 (411)
T ss_pred HHHHHHHHHHHHHhcCCCcEEEeeeeccCcchhhhhhhhcccchHHHHhhh--heeecHHHHHHHHHHHHHHHHHHHHhh
Confidence 44566899999999 799999999999999999999999999999999964 567999999999999999999999999
Q ss_pred CcccccCCCCCeeecCCCCeEEccccccccCCCCC---ccccCccCCCcccccc------CCCCCCcceehhHHHHHHHh
Q 014478 108 RALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGK---SYSTNLAFTPPEYMRT------GRVTPESVVYSFGTMLLDLL 178 (424)
Q Consensus 108 ~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~~---~~~gt~~y~aPE~~~~------~~~~~~~Dv~slG~~l~el~ 178 (424)
||||||||+|||++++.++||+|||++.....+. ..+||++|+|||.+.- ..|+...|+|++|+++|.|+
T Consensus 144 -IVHRDLKpENILlddn~~i~isDFGFa~~l~~GekLrelCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLL 222 (411)
T KOG0599|consen 144 -IVHRDLKPENILLDDNMNIKISDFGFACQLEPGEKLRELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLL 222 (411)
T ss_pred -hhhcccChhheeeccccceEEeccceeeccCCchhHHHhcCCCcccChhheeeecccCCCCccchhhHHHHHHHHHHHH
Confidence 9999999999999999999999999999988775 5689999999998863 25888999999999999999
Q ss_pred hCCCCCCchhhHHHhhhhhhHhhhc--ccCCCCCchhHHHHHHHHHHhcccCcCCCCCHHHHHHHH
Q 014478 179 SGKHIPPSHALDLIRSKNFLLLMDS--ALEGHFSNDEGTELVRLASRCLQSEARERPNAKSLVISL 242 (424)
Q Consensus 179 ~g~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~~~~~l 242 (424)
.|.+||.....-.+ ...+... ....+.-.+.+.+..+||.+||+.||.+|.|++|+++|-
T Consensus 223 aGcpPFwHRkQmlM----LR~ImeGkyqF~speWadis~~~KdLIsrlLqVdp~~Ritake~LaHp 284 (411)
T KOG0599|consen 223 AGCPPFWHRKQMLM----LRMIMEGKYQFRSPEWADISATVKDLISRLLQVDPTKRITAKEALAHP 284 (411)
T ss_pred cCCCchhHHHHHHH----HHHHHhcccccCCcchhhccccHHHHHHHHHeeCchhcccHHHHhcCh
Confidence 99977654311111 1111122 222223346788999999999999999999999999874
|
|
| >cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-40 Score=310.42 Aligned_cols=231 Identities=16% Similarity=0.196 Sum_probs=188.4
Q ss_pred CCCcccceeee--ecceecccccCCCc----hhhhHHHHHHHHHhcC-CCcCcceeEEEEEeCCeeeEEEecCCCCCHHh
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESSD----LGETLNLEEAKAVGNL-RSERLANLIGCCYEADERLLVAEFMPNETLAK 74 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~~----~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~ 74 (424)
|++|.||.+.+ .+..+++|++.... .....+..|..++..+ +||||+++++++..++..++||||++||+|..
T Consensus 6 G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~~g~L~~ 85 (316)
T cd05620 6 GSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTFQTKEHLFFVMEFLNGGDLMF 85 (316)
T ss_pred CCCeEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEEEeCCEEEEEECCCCCCcHHH
Confidence 89999999988 45677877775432 2345667788888765 89999999999999999999999999999999
Q ss_pred HhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCC----CCccccCccC
Q 014478 75 HLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRD----GKSYSTNLAF 150 (424)
Q Consensus 75 ~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~----~~~~~gt~~y 150 (424)
++.. ...+++.++..++.|++.||.|||+++ |+||||||+|||++.++.+||+|||+++.... .....||+.|
T Consensus 86 ~i~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~-ivHrDlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y 162 (316)
T cd05620 86 HIQD--KGRFDLYRATFYAAEIVCGLQFLHSKG-IIYRDLKLDNVMLDRDGHIKIADFGMCKENVFGDNRASTFCGTPDY 162 (316)
T ss_pred HHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-eEecCCCHHHeEECCCCCEEeCccCCCeecccCCCceeccCCCcCc
Confidence 9864 457899999999999999999999999 99999999999999999999999999875321 2345689999
Q ss_pred CCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHHHHHHHHHhcccCcC
Q 014478 151 TPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEAR 230 (424)
Q Consensus 151 ~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~ 230 (424)
+|||++.+..++.++|||||||++|||++|..||......... ..+.. .....+..++.++.+++.+||..||+
T Consensus 163 ~aPE~~~~~~~~~~~DiwslGvil~el~~g~~Pf~~~~~~~~~-----~~~~~-~~~~~~~~~~~~~~~li~~~l~~dP~ 236 (316)
T cd05620 163 IAPEILQGLKYTFSVDWWSFGVLLYEMLIGQSPFHGDDEDELF-----ESIRV-DTPHYPRWITKESKDILEKLFERDPT 236 (316)
T ss_pred cCHHHHcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHH-----HHHHh-CCCCCCCCCCHHHHHHHHHHccCCHH
Confidence 9999999889999999999999999999999888754222111 11111 11233445678999999999999999
Q ss_pred CCCCHH-HHHHH
Q 014478 231 ERPNAK-SLVIS 241 (424)
Q Consensus 231 ~Rps~~-~~~~~ 241 (424)
+||++. +++.+
T Consensus 237 ~R~~~~~~~~~h 248 (316)
T cd05620 237 RRLGVVGNIRGH 248 (316)
T ss_pred HcCCChHHHHcC
Confidence 999984 66543
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I |
| >cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-40 Score=317.60 Aligned_cols=232 Identities=21% Similarity=0.216 Sum_probs=193.0
Q ss_pred CCCcccceeeee--cceecccccCCCc----hhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHhH
Q 014478 2 GGRCSKFSICWF--HCHLKSSVLESSD----LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKH 75 (424)
Q Consensus 2 G~~g~v~~~~~~--~~~v~~~~~~~~~----~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~ 75 (424)
|++|.||.+.+. +..+++|++.... .....+.+|++++..++||||+++++++.+++..++||||+++|+|.++
T Consensus 12 G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~ 91 (350)
T cd05573 12 GAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADSPWIVKLYYSFQDEEHLYLVMEYMPGGDLMNL 91 (350)
T ss_pred CCcEEEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcCCCCccchhhheecCCeEEEEEcCCCCCCHHHH
Confidence 899999999885 7778888875432 3356788999999999999999999999999999999999999999999
Q ss_pred hccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCCC-------------
Q 014478 76 LFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGK------------- 142 (424)
Q Consensus 76 l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~~------------- 142 (424)
+.+ ...+++..+..++.||+.||.|||+++ ++||||||+|||++.++.+||+|||+++......
T Consensus 92 l~~--~~~l~~~~~~~i~~qi~~aL~~LH~~g-iiH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~ 168 (350)
T cd05573 92 LIR--KDVFPEETARFYIAELVLALDSVHKLG-FIHRDIKPDNILIDADGHIKLADFGLCKKMNKAKDREYYLNDSHNLL 168 (350)
T ss_pred HHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-eeccCCCHHHeEECCCCCEEeecCCCCccCcccCccccccccccccc
Confidence 975 367999999999999999999999999 9999999999999999999999999987654322
Q ss_pred --------------------ccccCccCCCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhh
Q 014478 143 --------------------SYSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMD 202 (424)
Q Consensus 143 --------------------~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~ 202 (424)
...||+.|+|||++.+..++.++|||||||++|||++|+.||....... ....+..
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~~~~----~~~~i~~ 244 (350)
T cd05573 169 FRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRGTPYGLECDWWSLGVILYEMLYGFPPFYSDTLQE----TYNKIIN 244 (350)
T ss_pred ccccccccccccccccccccccccCccccCHHHHcCCCCCCceeeEecchhhhhhccCCCCCCCCCHHH----HHHHHhc
Confidence 3458999999999998899999999999999999999998887643211 1111111
Q ss_pred --cccCCCCCchhHHHHHHHHHHhcccCcCCCCC-HHHHHHH
Q 014478 203 --SALEGHFSNDEGTELVRLASRCLQSEARERPN-AKSLVIS 241 (424)
Q Consensus 203 --~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps-~~~~~~~ 241 (424)
.....+....+++++.++|.+||. ||.+||+ +++++.+
T Consensus 245 ~~~~~~~p~~~~~~~~~~~li~~ll~-dp~~R~~s~~~ll~h 285 (350)
T cd05573 245 WKESLRFPPDPPVSPEAIDLICRLLC-DPEDRLGSFEEIKSH 285 (350)
T ss_pred cCCcccCCCCCCCCHHHHHHHHHHcc-ChhhcCCCHHHHhcC
Confidence 111112222358899999999997 9999999 9999976
|
Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the |
| >cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.3e-40 Score=302.00 Aligned_cols=236 Identities=17% Similarity=0.224 Sum_probs=189.2
Q ss_pred CCCcccceeeeec-------ceecccccCCCc--hhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCH
Q 014478 2 GGRCSKFSICWFH-------CHLKSSVLESSD--LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETL 72 (424)
Q Consensus 2 G~~g~v~~~~~~~-------~~v~~~~~~~~~--~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL 72 (424)
||+|.||.+.+.+ ..+++|++.... .....|.+|+.+++.++||||+++++++..+...++||||+++|+|
T Consensus 17 G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~~~lv~e~~~~~~L 96 (277)
T cd05062 17 GSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDL 96 (277)
T ss_pred ccCCeEEEEEeccCCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCeEEEEecCCCCCH
Confidence 8999999887643 346777664322 2355788999999999999999999999998999999999999999
Q ss_pred HhHhccCC--------CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCCC--
Q 014478 73 AKHLFHWE--------TQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGK-- 142 (424)
Q Consensus 73 ~~~l~~~~--------~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~~-- 142 (424)
.+++.... ...+++..+..++.|++.||.|||+.+ ++||||||+||+++.++.++|+|||+++......
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~-~vH~dlkp~Nil~~~~~~~~l~dfg~~~~~~~~~~~ 175 (277)
T cd05062 97 KSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNANK-FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYY 175 (277)
T ss_pred HHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCcchheEEEcCCCCEEECCCCCccccCCccee
Confidence 99986421 124578889999999999999999999 9999999999999999999999999987543221
Q ss_pred ----ccccCccCCCccccccCCCCCCcceehhHHHHHHHhh-CCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHHH
Q 014478 143 ----SYSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTEL 217 (424)
Q Consensus 143 ----~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 217 (424)
...+++.|+|||.+.++.++.++|||||||++|||++ |..|+..... ...............+..++..+
T Consensus 176 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~p~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~ 250 (277)
T cd05062 176 RKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGMSN-----EQVLRFVMEGGLLDKPDNCPDML 250 (277)
T ss_pred ecCCCCccCHhhcChhHhhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCH-----HHHHHHHHcCCcCCCCCCCCHHH
Confidence 2234678999999998889999999999999999999 5666654321 11122222222223455677899
Q ss_pred HHHHHHhcccCcCCCCCHHHHHHHHH
Q 014478 218 VRLASRCLQSEARERPNAKSLVISLM 243 (424)
Q Consensus 218 ~~li~~cl~~dp~~Rps~~~~~~~l~ 243 (424)
.+++.+||+.||++|||+.+++..|+
T Consensus 251 ~~li~~~l~~~p~~Rps~~e~l~~l~ 276 (277)
T cd05062 251 FELMRMCWQYNPKMRPSFLEIISSIK 276 (277)
T ss_pred HHHHHHHcCCChhhCcCHHHHHHHhh
Confidence 99999999999999999999998875
|
Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh |
| >cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.4e-40 Score=300.99 Aligned_cols=232 Identities=23% Similarity=0.301 Sum_probs=184.3
Q ss_pred CCCcccceeeeec--------------------------ceecccccCCCch-hhhHHHHHHHHHhcCCCcCcceeEEEE
Q 014478 2 GGRCSKFSICWFH--------------------------CHLKSSVLESSDL-GETLNLEEAKAVGNLRSERLANLIGCC 54 (424)
Q Consensus 2 G~~g~v~~~~~~~--------------------------~~v~~~~~~~~~~-~~~~~~~E~~~l~~l~h~~iv~~~~~~ 54 (424)
|+||.||++.+.. ..|++|++..... ....|.+|+.+++.++||||++++++|
T Consensus 6 G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~~~~~ 85 (274)
T cd05076 6 GTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSHRDIALAFFETASLMSQVSHIHLAFVHGVC 85 (274)
T ss_pred ccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHHHHHHHHHHHHHHHHhcCCCCCeeeEEEEE
Confidence 8999999987632 2355565544332 245788899999999999999999999
Q ss_pred EeCCeeeEEEecCCCCCHHhHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCC-------Ce
Q 014478 55 YEADERLLVAEFMPNETLAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDG-------NP 127 (424)
Q Consensus 55 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~-------~~ 127 (424)
..+...++||||+++|+|..++.. ....+++.++..++.|++.||.|||+++ ++||||||+|||++.++ .+
T Consensus 86 ~~~~~~~lv~ey~~~g~L~~~l~~-~~~~~~~~~~~~i~~qi~~~l~~lH~~~-iiH~dlkp~Nill~~~~~~~~~~~~~ 163 (274)
T cd05076 86 VRGSENIMVEEFVEHGPLDVCLRK-EKGRVPVAWKITVAQQLASALSYLEDKN-LVHGNVCAKNILLARLGLAEGTSPFI 163 (274)
T ss_pred EeCCceEEEEecCCCCcHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHcCC-ccCCCCCcccEEEeccCcccCcccee
Confidence 999999999999999999999864 3457899999999999999999999999 99999999999997654 37
Q ss_pred EEccccccccCCCCCccccCccCCCcccccc-CCCCCCcceehhHHHHHHHh-hCCCCCCchhhHHHhhhhhhHhhhccc
Q 014478 128 RLSSFGLMKNSRDGKSYSTNLAFTPPEYMRT-GRVTPESVVYSFGTMLLDLL-SGKHIPPSHALDLIRSKNFLLLMDSAL 205 (424)
Q Consensus 128 kl~Dfg~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slG~~l~el~-~g~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (424)
|++|||++..........++..|+|||.+.+ ..++.++|||||||++|||+ +|..|+........ ......
T Consensus 164 kl~d~g~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~-----~~~~~~-- 236 (274)
T cd05076 164 KLSDPGVSFTALSREERVERIPWIAPECVPGGNSLSTAADKWSFGTTLLEICFDGEVPLKERTPSEK-----ERFYEK-- 236 (274)
T ss_pred eecCCccccccccccccccCCcccCchhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCccccChHHH-----HHHHHh--
Confidence 9999999876555455567889999999875 45899999999999999995 67766654321111 111111
Q ss_pred CCCCCchhHHHHHHHHHHhcccCcCCCCCHHHHHHHH
Q 014478 206 EGHFSNDEGTELVRLASRCLQSEARERPNAKSLVISL 242 (424)
Q Consensus 206 ~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~~~~~l 242 (424)
....+...++++.++|.+||+.+|++|||+.+++..|
T Consensus 237 ~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~il~~L 273 (274)
T cd05076 237 KHRLPEPSCKELATLISQCLTYEPTQRPSFRTILRDL 273 (274)
T ss_pred ccCCCCCCChHHHHHHHHHcccChhhCcCHHHHHHhh
Confidence 1123334456899999999999999999999999876
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt |
| >cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-40 Score=311.62 Aligned_cols=236 Identities=14% Similarity=0.211 Sum_probs=188.8
Q ss_pred CCCcccceeee--ecceecccccCCC----chhhhHHHHHHHHHhcC-CCcCcceeEEEEEeCCeeeEEEecCCCCCHHh
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESS----DLGETLNLEEAKAVGNL-RSERLANLIGCCYEADERLLVAEFMPNETLAK 74 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~----~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~ 74 (424)
|+||.||.+.. .+..+++|++... ......+.+|+.++.++ +||||+++++++..++..++||||+++|+|..
T Consensus 6 G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~~~~L~~ 85 (329)
T cd05618 6 GSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMF 85 (329)
T ss_pred CCCeEEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEEEeCCEEEEEEeCCCCCCHHH
Confidence 89999999987 4556777776543 23345677899988877 89999999999999999999999999999999
Q ss_pred HhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCC----CCccccCccC
Q 014478 75 HLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRD----GKSYSTNLAF 150 (424)
Q Consensus 75 ~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~----~~~~~gt~~y 150 (424)
++.. ...+++..+..++.|++.||.|||+++ ++||||||+||+++.++.+||+|||+++.... .....||..|
T Consensus 86 ~~~~--~~~l~~~~~~~i~~qi~~~l~~lH~~~-ivH~Dikp~Nili~~~~~~kL~DfG~~~~~~~~~~~~~~~~gt~~y 162 (329)
T cd05618 86 HMQR--QRKLPEEHARFYSAEISLALNYLHERG-IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSTFCGTPNY 162 (329)
T ss_pred HHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-eeeCCCCHHHEEECCCCCEEEeeCCccccccCCCCccccccCCccc
Confidence 8864 457999999999999999999999999 99999999999999999999999999875322 2345689999
Q ss_pred CCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHh----hhhhhHhhhcccCCCCCchhHHHHHHHHHHhcc
Q 014478 151 TPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIR----SKNFLLLMDSALEGHFSNDEGTELVRLASRCLQ 226 (424)
Q Consensus 151 ~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~ 226 (424)
+|||++.+..++.++|||||||++|+|++|..||......... .......+. ......|...+.++.+++.+||+
T Consensus 163 ~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~i~-~~~~~~p~~~~~~~~~ll~~~L~ 241 (329)
T cd05618 163 IAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVIL-EKQIRIPRSLSVKAASVLKSFLN 241 (329)
T ss_pred cCHHHHcCCCCCCccceecccHHHHHHhhCCCCCccCCCcCCcccccHHHHHHHHh-cCCCCCCCCCCHHHHHHHHHHhc
Confidence 9999999888999999999999999999999887521100000 000111111 11223566678899999999999
Q ss_pred cCcCCCCC------HHHHHHH
Q 014478 227 SEARERPN------AKSLVIS 241 (424)
Q Consensus 227 ~dp~~Rps------~~~~~~~ 241 (424)
.||++||+ +.+++++
T Consensus 242 ~dP~~R~~~~~~~~~~~i~~h 262 (329)
T cd05618 242 KDPKERLGCHPQTGFADIQGH 262 (329)
T ss_pred CCHHHcCCCCCCCCHHHHhcC
Confidence 99999998 4676654
|
Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o |
| >cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-40 Score=305.11 Aligned_cols=237 Identities=18% Similarity=0.227 Sum_probs=193.8
Q ss_pred CCCcccceeee--ecceecccccCCCc----hhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHhH
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESSD----LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKH 75 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~~----~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~ 75 (424)
|++|.||.+.+ .+..+++|++.... .....+.+|+.+++.++||||+++++.+..++..++||||+++|+|.++
T Consensus 11 G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~ 90 (285)
T cd05605 11 GGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFH 90 (285)
T ss_pred CCCeEEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcCCCCEeeeeeeecCCCeEEEEEeccCCCcHHHH
Confidence 89999999887 46678888775432 2235677899999999999999999999999999999999999999998
Q ss_pred hccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCC---CccccCccCCC
Q 014478 76 LFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG---KSYSTNLAFTP 152 (424)
Q Consensus 76 l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~---~~~~gt~~y~a 152 (424)
+.......+++..+..++.|++.||.|||+++ ++||||||+||++++++.++|+|||+++..... ....|+..|+|
T Consensus 91 ~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~-ivH~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~y~a 169 (285)
T cd05605 91 IYNMGNPGFDEERAVFYAAEITCGLEDLHRER-IVYRDLKPENILLDDYGHIRISDLGLAVEIPEGETIRGRVGTVGYMA 169 (285)
T ss_pred HHhcCcCCCCHHHHHHHHHHHHHHHHHHHHCC-cEecCCCHHHEEECCCCCEEEeeCCCceecCCCCccccccCCCCccC
Confidence 86544457999999999999999999999999 999999999999999999999999998865433 23468899999
Q ss_pred ccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHHHHHHHHHhcccCcCCC
Q 014478 153 PEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARER 232 (424)
Q Consensus 153 PE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~R 232 (424)
||++.+..++.++|||||||++|+|++|..||......... ......+. ......+...+..+.+++.+||..||++|
T Consensus 170 PE~~~~~~~~~~~Diws~G~~l~el~~g~~pf~~~~~~~~~-~~~~~~~~-~~~~~~~~~~~~~~~~li~~~l~~~P~~R 247 (285)
T cd05605 170 PEVVKNERYTFSPDWWGLGCLIYEMIEGKSPFRQRKEKVKR-EEVERRVK-EDQEEYSEKFSEAARSICRQLLTKDPGFR 247 (285)
T ss_pred cHHhcCCCCCccccchhHHHHHHHHHHCCCCCCCCchhhHH-HHHHHHhh-hcccccCcccCHHHHHHHHHHccCCHHHh
Confidence 99999888999999999999999999999888754221111 11111111 11223445578899999999999999999
Q ss_pred C-----CHHHHHHH
Q 014478 233 P-----NAKSLVIS 241 (424)
Q Consensus 233 p-----s~~~~~~~ 241 (424)
| ++++++.+
T Consensus 248 ~~~~~~~~~~l~~~ 261 (285)
T cd05605 248 LGCRGEGAEEVKAH 261 (285)
T ss_pred cCCCCCCHHHHhcC
Confidence 9 88888765
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5, |
| >cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-40 Score=310.27 Aligned_cols=231 Identities=16% Similarity=0.235 Sum_probs=190.3
Q ss_pred CCCcccceeeee--cceecccccCCC----chhhhHHHHHHHHHhcC-CCcCcceeEEEEEeCCeeeEEEecCCCCCHHh
Q 014478 2 GGRCSKFSICWF--HCHLKSSVLESS----DLGETLNLEEAKAVGNL-RSERLANLIGCCYEADERLLVAEFMPNETLAK 74 (424)
Q Consensus 2 G~~g~v~~~~~~--~~~v~~~~~~~~----~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~ 74 (424)
|+||.||.+.+. +..+++|++... ......+..|.+++..+ +||||+++++++..++..++||||+++|+|..
T Consensus 6 G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~~~L~~ 85 (321)
T cd05591 6 GSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCFQTKDRLFFVMEYVNGGDLMF 85 (321)
T ss_pred CCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCeEEEEEeCCCCCcHHH
Confidence 899999999884 456788877543 23345677899998876 89999999999999999999999999999999
Q ss_pred HhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCC----CCccccCccC
Q 014478 75 HLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRD----GKSYSTNLAF 150 (424)
Q Consensus 75 ~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~----~~~~~gt~~y 150 (424)
++.. ...+++..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++.... .....||+.|
T Consensus 86 ~l~~--~~~~~~~~~~~~~~qi~~aL~~LH~~~-ivHrDikp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~gt~~y 162 (321)
T cd05591 86 QIQR--SRKFDEPRSRFYAAEVTLALMFLHRHG-VIYRDLKLDNILLDAEGHCKLADFGMCKEGILNGVTTTTFCGTPDY 162 (321)
T ss_pred HHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-eeccCCCHHHeEECCCCCEEEeecccceecccCCccccccccCccc
Confidence 8864 457899999999999999999999999 99999999999999999999999999875432 2234689999
Q ss_pred CCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHHHHHHHHHhcccCcC
Q 014478 151 TPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEAR 230 (424)
Q Consensus 151 ~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~ 230 (424)
+|||++.+..++.++|||||||++|+|++|+.||........ ...+... ....|..++.++.+++.+||+.||+
T Consensus 163 ~aPE~~~~~~~~~~~DvwslG~il~el~tg~~Pf~~~~~~~~----~~~i~~~--~~~~p~~~~~~~~~ll~~~L~~dp~ 236 (321)
T cd05591 163 IAPEILQELEYGPSVDWWALGVLMYEMMAGQPPFEADNEDDL----FESILHD--DVLYPVWLSKEAVSILKAFMTKNPN 236 (321)
T ss_pred cCHHHHcCCCCCCccceechhHHHHHHhcCCCCCCCCCHHHH----HHHHHcC--CCCCCCCCCHHHHHHHHHHhccCHH
Confidence 999999988899999999999999999999988876422211 1111111 1123445678999999999999999
Q ss_pred CCC-------CHHHHHHH
Q 014478 231 ERP-------NAKSLVIS 241 (424)
Q Consensus 231 ~Rp-------s~~~~~~~ 241 (424)
+|| ++.+++.+
T Consensus 237 ~R~~~~~~~~~~~~~~~h 254 (321)
T cd05591 237 KRLGCVASQGGEDAIKQH 254 (321)
T ss_pred HcCCCCCCCCCHHHHhcC
Confidence 999 77888765
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to |
| >cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-39 Score=303.01 Aligned_cols=239 Identities=19% Similarity=0.291 Sum_probs=193.9
Q ss_pred CCCcccceeeeec-------ceecccccCCC--chhhhHHHHHHHHHhcC-CCcCcceeEEEEEeCCeeeEEEecCCCCC
Q 014478 2 GGRCSKFSICWFH-------CHLKSSVLESS--DLGETLNLEEAKAVGNL-RSERLANLIGCCYEADERLLVAEFMPNET 71 (424)
Q Consensus 2 G~~g~v~~~~~~~-------~~v~~~~~~~~--~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~~~~gs 71 (424)
|++|.||.+.+.+ ..+++|.+... ......+.+|+.++.++ +|+||+++++++..++..++||||+++|+
T Consensus 23 g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~li~e~~~~~~ 102 (293)
T cd05053 23 GAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGVCTQEGPLYVVVEYAAHGN 102 (293)
T ss_pred cccccEEEEEEecCCCCCCceeEEEEEccCCCCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEcCCCCeEEEEEeCCCCc
Confidence 8899999998743 34566665432 23345788999999999 89999999999999999999999999999
Q ss_pred HHhHhccC--------------CCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEcccccccc
Q 014478 72 LAKHLFHW--------------ETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKN 137 (424)
Q Consensus 72 L~~~l~~~--------------~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~ 137 (424)
|.+++... ....+++..+++++.|++.||.|||+++ ++||||||+||+++.++.+||+|||+++.
T Consensus 103 L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~-ivH~dlkp~Nil~~~~~~~kL~Dfg~~~~ 181 (293)
T cd05053 103 LRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLASKK-CIHRDLAARNVLVTEDHVMKIADFGLARD 181 (293)
T ss_pred HHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHCC-ccccccceeeEEEcCCCeEEeCccccccc
Confidence 99998531 2456899999999999999999999999 99999999999999999999999999886
Q ss_pred CCCCC------ccccCccCCCccccccCCCCCCcceehhHHHHHHHhh-CCCCCCchhhHHHhhhhhhHhhhcccCCCCC
Q 014478 138 SRDGK------SYSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKNFLLLMDSALEGHFS 210 (424)
Q Consensus 138 ~~~~~------~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 210 (424)
..... ...++..|+|||.+.+..++.++|||||||++|||++ |..|++...... .............+
T Consensus 182 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~-----~~~~~~~~~~~~~~ 256 (293)
T cd05053 182 IHHIDYYRKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVEE-----LFKLLKEGYRMEKP 256 (293)
T ss_pred cccccceeccCCCCCCccccCHHHhccCCcCcccceeehhhHHHHHhcCCCCCCCCCCHHH-----HHHHHHcCCcCCCC
Confidence 54321 1234568999999988889999999999999999997 777776532211 12222222333445
Q ss_pred chhHHHHHHHHHHhcccCcCCCCCHHHHHHHHHHHh
Q 014478 211 NDEGTELVRLASRCLQSEARERPNAKSLVISLMSLQ 246 (424)
Q Consensus 211 ~~~~~~l~~li~~cl~~dp~~Rps~~~~~~~l~~~~ 246 (424)
..++.++.+++.+||..||++|||+.++++.|..+.
T Consensus 257 ~~~~~~~~~li~~~l~~~p~~Rps~~eil~~l~~~~ 292 (293)
T cd05053 257 QNCTQELYHLMRDCWHEVPSQRPTFKQLVEDLDRML 292 (293)
T ss_pred CCCCHHHHHHHHHHcccCcccCcCHHHHHHHHHHhh
Confidence 566789999999999999999999999999998764
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation, |
| >cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-40 Score=309.43 Aligned_cols=230 Identities=17% Similarity=0.227 Sum_probs=187.0
Q ss_pred CCCcccceeee--ecceecccccCCCc----hhhhHHHHHHHHHhcC-CCcCcceeEEEEEeCCeeeEEEecCCCCCHHh
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESSD----LGETLNLEEAKAVGNL-RSERLANLIGCCYEADERLLVAEFMPNETLAK 74 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~~----~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~ 74 (424)
|+||.||.+.+ .+..+++|++.... ...+.+..|..++..+ +||||+++++++..+...++||||++||+|..
T Consensus 6 G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~~~~~~lv~e~~~gg~L~~ 85 (316)
T cd05592 6 GSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTFQTKEHLFFVMEYLNGGDLMF 85 (316)
T ss_pred CCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCCCcHHH
Confidence 89999999987 44567888775432 2344566677777655 89999999999999999999999999999999
Q ss_pred HhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCC----CCccccCccC
Q 014478 75 HLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRD----GKSYSTNLAF 150 (424)
Q Consensus 75 ~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~----~~~~~gt~~y 150 (424)
++.. ...+++.++..++.|++.||.|||+++ |+||||||+|||++.++.+||+|||+++.... .....||+.|
T Consensus 86 ~~~~--~~~~~~~~~~~~~~qi~~al~~LH~~~-ivH~dlkp~Nill~~~~~~kL~Dfg~a~~~~~~~~~~~~~~gt~~y 162 (316)
T cd05592 86 HIQS--SGRFDEARARFYAAEIICGLQFLHKKG-IIYRDLKLDNVLLDKDGHIKIADFGMCKENMNGEGKASTFCGTPDY 162 (316)
T ss_pred HHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-EEeCCCCHHHeEECCCCCEEEccCcCCeECCCCCCccccccCCccc
Confidence 9864 457899999999999999999999999 99999999999999999999999999875432 2335689999
Q ss_pred CCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHHHHHHHHHhcccCcC
Q 014478 151 TPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEAR 230 (424)
Q Consensus 151 ~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~ 230 (424)
+|||++.+..++.++|||||||++|||++|..||......... ..+.. .....+..++.++.+++.+||+.||.
T Consensus 163 ~aPE~~~~~~~~~~~DvwslG~il~ell~G~~Pf~~~~~~~~~-----~~i~~-~~~~~~~~~~~~~~~ll~~~l~~~P~ 236 (316)
T cd05592 163 IAPEILKGQKYNESVDWWSFGVLLYEMLIGQSPFHGEDEDELF-----DSILN-DRPHFPRWISKEAKDCLSKLFERDPT 236 (316)
T ss_pred cCHHHHcCCCCCCcccchhHHHHHHHHHhCCCCCCCCCHHHHH-----HHHHc-CCCCCCCCCCHHHHHHHHHHccCCHH
Confidence 9999999888999999999999999999999888754221111 11111 12234556788999999999999999
Q ss_pred CCCCHH-HHHH
Q 014478 231 ERPNAK-SLVI 240 (424)
Q Consensus 231 ~Rps~~-~~~~ 240 (424)
+||++. +++.
T Consensus 237 ~R~~~~~~l~~ 247 (316)
T cd05592 237 KRLGVDGDIRQ 247 (316)
T ss_pred HcCCChHHHHc
Confidence 999875 5544
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp |
| >cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-40 Score=313.07 Aligned_cols=227 Identities=19% Similarity=0.216 Sum_probs=187.2
Q ss_pred CCCcccceeee-----ecceecccccCCCc---hhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHH
Q 014478 2 GGRCSKFSICW-----FHCHLKSSVLESSD---LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLA 73 (424)
Q Consensus 2 G~~g~v~~~~~-----~~~~v~~~~~~~~~---~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~ 73 (424)
|++|.||.+.. .+..+++|++.... .....+..|++++++++||||+++++++..++..++||||+++|+|.
T Consensus 7 G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~ 86 (318)
T cd05582 7 GSFGKVFLVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMERDILAEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLF 86 (318)
T ss_pred CCCEEEEEEEEeccCCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhCCCCCcccEEEEEEcCCEEEEEEcCCCCCcHH
Confidence 89999998764 45667777775433 23456778999999999999999999999999999999999999999
Q ss_pred hHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCC----CccccCcc
Q 014478 74 KHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG----KSYSTNLA 149 (424)
Q Consensus 74 ~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~----~~~~gt~~ 149 (424)
+++.. ...+++..+..++.||+.||.|||+++ ++||||||+|||++.++.+||+|||+++..... ....||+.
T Consensus 87 ~~l~~--~~~l~~~~~~~~~~qi~~~l~~lH~~~-i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~~~~~~~~g~~~ 163 (318)
T cd05582 87 TRLSK--EVMFTEEDVKFYLAELALALDHLHSLG-IIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVE 163 (318)
T ss_pred HHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-EecCCCCHHHeEECCCCcEEEeeccCCcccCCCCCceecccCChh
Confidence 99864 457899999999999999999999999 999999999999999999999999998765433 23468999
Q ss_pred CCCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHHHHHHHHHhcccCc
Q 014478 150 FTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEA 229 (424)
Q Consensus 150 y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp 229 (424)
|+|||.+.+..++.++|||||||++|||++|+.||........ ...+.. .....+..+++++.+++.+||+.||
T Consensus 164 y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~----~~~i~~--~~~~~p~~~~~~~~~li~~~l~~~P 237 (318)
T cd05582 164 YMAPEVVNRRGHTQSADWWSFGVLMFEMLTGSLPFQGKDRKET----MTMILK--AKLGMPQFLSPEAQSLLRALFKRNP 237 (318)
T ss_pred hcCHHHHcCCCCCCccceeccceEeeeeccCCCCCCCCCHHHH----HHHHHc--CCCCCCCCCCHHHHHHHHHHhhcCH
Confidence 9999999988889999999999999999999988865421111 111111 1123455678899999999999999
Q ss_pred CCCCCHHH
Q 014478 230 RERPNAKS 237 (424)
Q Consensus 230 ~~Rps~~~ 237 (424)
++||++.+
T Consensus 238 ~~R~~a~~ 245 (318)
T cd05582 238 ANRLGAGP 245 (318)
T ss_pred hHcCCCCC
Confidence 99999443
|
Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate |
| >cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-40 Score=317.14 Aligned_cols=232 Identities=16% Similarity=0.129 Sum_probs=189.4
Q ss_pred CCCcccceeee--ecceecccccCCCc----hhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHhH
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESSD----LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKH 75 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~~----~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~ 75 (424)
|+||.||.+.+ .+..+++|++.... .....+.+|++++..++||||+++++++.++...++||||++||+|.++
T Consensus 12 G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~E~~~~g~L~~~ 91 (364)
T cd05599 12 GAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEADNPWVVKLYYSFQDENYLYLIMEYLPGGDMMTL 91 (364)
T ss_pred cCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCeEEEEECCCCCcHHHHH
Confidence 89999999887 46778888875432 2345678899999999999999999999999999999999999999999
Q ss_pred hccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCC--------------
Q 014478 76 LFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG-------------- 141 (424)
Q Consensus 76 l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~-------------- 141 (424)
+.. ...+++..+..++.|++.||.|||+++ |+||||||+|||++.++.+||+|||+++.....
T Consensus 92 l~~--~~~l~~~~~~~~~~qi~~aL~~lH~~~-ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~ 168 (364)
T cd05599 92 LMK--KDTFTEEETRFYIAETILAIDSIHKLG-YIHRDIKPDNLLLDAKGHIKLSDFGLCTGLKKSHRTEFYRILSHALP 168 (364)
T ss_pred HHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-eEeccCCHHHeEECCCCCEEEeecccceecccccccccccccccccc
Confidence 865 457999999999999999999999999 999999999999999999999999998653211
Q ss_pred ----------------------------CccccCccCCCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHh
Q 014478 142 ----------------------------KSYSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIR 193 (424)
Q Consensus 142 ----------------------------~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~ 193 (424)
....||+.|+|||++.+..++.++|||||||++|||++|..||........
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~~G~~Pf~~~~~~~~- 247 (364)
T cd05599 169 SNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQTGYNKECDWWSLGVIMYEMLVGYPPFCSDNPQET- 247 (364)
T ss_pred ccccccccccccccccccchhhcccccccccccCccccCHHHHcCCCCCCeeeeecchhHHHHhhcCCCCCCCCCHHHH-
Confidence 023589999999999988899999999999999999999988875422111
Q ss_pred hhhhhHhhhc--ccCCCCCchhHHHHHHHHHHhcccCcCCCCC---HHHHHHH
Q 014478 194 SKNFLLLMDS--ALEGHFSNDEGTELVRLASRCLQSEARERPN---AKSLVIS 241 (424)
Q Consensus 194 ~~~~~~~~~~--~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps---~~~~~~~ 241 (424)
...+... .........+++++.++|.+|+. +|.+|++ +.+++.+
T Consensus 248 ---~~~i~~~~~~~~~~~~~~~s~~~~~li~~ll~-~p~~R~~~~~~~~ll~h 296 (364)
T cd05599 248 ---YRKIINWKETLQFPDEVPLSPEAKDLIKRLCC-EAERRLGNNGVNEIKSH 296 (364)
T ss_pred ---HHHHHcCCCccCCCCCCCCCHHHHHHHHHHcc-CHhhcCCCCCHHHHhcC
Confidence 1111111 11111122457899999999997 9999987 9998875
|
Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica |
| >cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-40 Score=310.53 Aligned_cols=225 Identities=19% Similarity=0.264 Sum_probs=186.0
Q ss_pred CCCcccceeee--ecceecccccCCC----chhhhHHHHHHHHHhcC-CCcCcceeEEEEEeCCeeeEEEecCCCCCHHh
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESS----DLGETLNLEEAKAVGNL-RSERLANLIGCCYEADERLLVAEFMPNETLAK 74 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~----~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~ 74 (424)
|++|.||.+.+ .+..+++|++... ......+..|..++..+ +||||+++++++...+..++||||++||+|.+
T Consensus 6 G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~~~iv~Ey~~~g~L~~ 85 (320)
T cd05590 6 GSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCFQTPDRLFFVMEFVNGGDLMF 85 (320)
T ss_pred CCCeEEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEEEcCCEEEEEEcCCCCchHHH
Confidence 89999999987 4566788877543 23345677898888877 79999999999999999999999999999999
Q ss_pred HhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCC----CCccccCccC
Q 014478 75 HLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRD----GKSYSTNLAF 150 (424)
Q Consensus 75 ~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~----~~~~~gt~~y 150 (424)
++.. ...+++..+..++.|++.||.|||+++ ++||||||+|||++.++.+||+|||+++.... .....||+.|
T Consensus 86 ~i~~--~~~l~~~~~~~~~~ql~~~L~~lH~~~-ivH~dlkp~NIli~~~~~~kL~DfG~~~~~~~~~~~~~~~~gt~~y 162 (320)
T cd05590 86 HIQK--SRRFDEARARFYAAEITSALMFLHDKG-IIYRDLKLDNVLLDHEGHCKLADFGMCKEGIFNGKTTSTFCGTPDY 162 (320)
T ss_pred HHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-eEeCCCCHHHeEECCCCcEEEeeCCCCeecCcCCCcccccccCccc
Confidence 8864 457999999999999999999999999 99999999999999999999999999875322 2234689999
Q ss_pred CCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHHHHHHHHHhcccCcC
Q 014478 151 TPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEAR 230 (424)
Q Consensus 151 ~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~ 230 (424)
+|||++.+..++.++|||||||++|+|++|+.||........ ...+... ....+..++.++.+++.+||+.||+
T Consensus 163 ~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~----~~~i~~~--~~~~~~~~~~~~~~li~~~L~~dP~ 236 (320)
T cd05590 163 IAPEILQEMLYGPSVDWWAMGVLLYEMLCGHAPFEAENEDDL----FEAILND--EVVYPTWLSQDAVDILKAFMTKNPT 236 (320)
T ss_pred cCHHHHcCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHHHH----HHHHhcC--CCCCCCCCCHHHHHHHHHHcccCHH
Confidence 999999988899999999999999999999988875422211 1111111 1123445688999999999999999
Q ss_pred CCCCH
Q 014478 231 ERPNA 235 (424)
Q Consensus 231 ~Rps~ 235 (424)
+||++
T Consensus 237 ~R~~~ 241 (320)
T cd05590 237 MRLGS 241 (320)
T ss_pred HCCCC
Confidence 99998
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal |
| >cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-40 Score=316.83 Aligned_cols=233 Identities=19% Similarity=0.219 Sum_probs=187.6
Q ss_pred CCCcccceeee--ecceecccccCCCc----hhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHhH
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESSD----LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKH 75 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~~----~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~ 75 (424)
|+||.||++.+ .+..+++|++.... .....+.+|+++++.++||||+++++++.+.+..++||||++||+|.++
T Consensus 12 G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~l~~~~~~~~~~~lv~E~~~gg~L~~~ 91 (381)
T cd05626 12 GAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMDYIPGGDMMSL 91 (381)
T ss_pred cCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCCCCeeeeEEEEecCCEEEEEEecCCCCcHHHH
Confidence 89999999987 45667877775432 2345788999999999999999999999999999999999999999999
Q ss_pred hccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCC---------------
Q 014478 76 LFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRD--------------- 140 (424)
Q Consensus 76 l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~--------------- 140 (424)
+.. ...+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++....
T Consensus 92 l~~--~~~~~e~~~~~~~~qi~~aL~~LH~~g-ivHrDlKp~Nili~~~~~~kL~DFGl~~~~~~~~~~~~~~~~~~~~~ 168 (381)
T cd05626 92 LIR--MEVFPEVLARFYIAELTLAIESVHKMG-FIHRDIKPDNILIDLDGHIKLTDFGLCTGFRWTHNSKYYQKGSHIRQ 168 (381)
T ss_pred HHh--cCCCCHHHHHHHHHHHHHHHHHHHhCC-eeecCCcHHHEEECCCCCEEEeeCcCCcccccccccccccccccccc
Confidence 864 456899999999999999999999999 99999999999999999999999998753210
Q ss_pred ------------------------------------CCccccCccCCCccccccCCCCCCcceehhHHHHHHHhhCCCCC
Q 014478 141 ------------------------------------GKSYSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIP 184 (424)
Q Consensus 141 ------------------------------------~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~ 184 (424)
.....||+.|+|||++.+..++.++|||||||++|||++|..||
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~Pf 248 (381)
T cd05626 169 DSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLRKGYTQLCDWWSVGVILFEMLVGQPPF 248 (381)
T ss_pred cccCcccccccccccccccccchhhccccccccccccccccCCccccCHHHHcCCCCCCccceeehhhHHHHHHhCCCCC
Confidence 01246899999999999888999999999999999999999888
Q ss_pred CchhhHHHhhhhhhHhhh--cccCCCCCchhHHHHHHHHHH--hcccCcCCCCCHHHHHHH
Q 014478 185 PSHALDLIRSKNFLLLMD--SALEGHFSNDEGTELVRLASR--CLQSEARERPNAKSLVIS 241 (424)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~li~~--cl~~dp~~Rps~~~~~~~ 241 (424)
........ ...... ..........+++++.++|.+ |+..+|..||++++++.+
T Consensus 249 ~~~~~~~~----~~~i~~~~~~~~~~~~~~~s~~~~dli~~ll~~~~~~~~R~~~~~~l~h 305 (381)
T cd05626 249 LAPTPTET----QLKVINWENTLHIPPQVKLSPEAVDLITKLCCSAEERLGRNGADDIKAH 305 (381)
T ss_pred cCCCHHHH----HHHHHccccccCCCCCCCCCHHHHHHHHHHccCcccccCCCCHHHHhcC
Confidence 65421111 111111 111112223467899999998 445666679999999976
|
Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po |
| >cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-39 Score=297.98 Aligned_cols=236 Identities=21% Similarity=0.295 Sum_probs=195.8
Q ss_pred CCCcccceeee-ecceecccccCCCchhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHhHhccCC
Q 014478 2 GGRCSKFSICW-FHCHLKSSVLESSDLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWE 80 (424)
Q Consensus 2 G~~g~v~~~~~-~~~~v~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~ 80 (424)
|++|.||.+.+ .+..+++|.+.........+.+|+.++++++|+||+++++++. .+..+++|||+++++|.+++....
T Consensus 17 G~~g~v~~~~~~~~~~~a~K~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e~~~~~~L~~~~~~~~ 95 (260)
T cd05067 17 GQFGEVWMGYYNGHTKVAIKSLKQGSMSPEAFLAEANLMKQLQHPRLVRLYAVVT-QEPIYIITEYMENGSLVDFLKTPE 95 (260)
T ss_pred CccceEEeeecCCCceEEEEEecCCCCcHHHHHHHHHHHHhcCCcCeeeEEEEEc-cCCcEEEEEcCCCCCHHHHHHhcC
Confidence 89999999987 5567888888776666778999999999999999999999875 456899999999999999986545
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCC-----CccccCccCCCccc
Q 014478 81 TQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG-----KSYSTNLAFTPPEY 155 (424)
Q Consensus 81 ~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~-----~~~~gt~~y~aPE~ 155 (424)
+..+++.++..++.|++.||.|||+.+ ++||||||+||+++.++.++|+|||++...... ....++..|+|||+
T Consensus 96 ~~~~~~~~~~~i~~~i~~al~~LH~~~-i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~~pe~ 174 (260)
T cd05067 96 GIKLTINKLIDMAAQIAEGMAFIERKN-YIHRDLRAANILVSETLCCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEA 174 (260)
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHhcCC-eecccccHHhEEEcCCCCEEEccCcceeecCCCCcccccCCcccccccCHHH
Confidence 567899999999999999999999999 999999999999999999999999998765422 12345678999999
Q ss_pred cccCCCCCCcceehhHHHHHHHhh-CCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHHHHHHHHHhcccCcCCCCC
Q 014478 156 MRTGRVTPESVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERPN 234 (424)
Q Consensus 156 ~~~~~~~~~~Dv~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps 234 (424)
+.+..++.++||||||+++|+|++ |+.||...... ..............+...+.++.+++.+||..+|++|||
T Consensus 175 ~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~ 249 (260)
T cd05067 175 INYGTFTIKSDVWSFGILLTEIVTYGRIPYPGMTNP-----EVIQNLERGYRMPRPDNCPEELYELMRLCWKEKPEERPT 249 (260)
T ss_pred hccCCcCcccchHHHHHHHHHHHhCCCCCCCCCChH-----HHHHHHHcCCCCCCCCCCCHHHHHHHHHHccCChhhCCC
Confidence 998889999999999999999999 88777653211 111122222233445556789999999999999999999
Q ss_pred HHHHHHHHHH
Q 014478 235 AKSLVISLMS 244 (424)
Q Consensus 235 ~~~~~~~l~~ 244 (424)
+++++..|+.
T Consensus 250 ~~~l~~~l~~ 259 (260)
T cd05067 250 FEYLRSVLED 259 (260)
T ss_pred HHHHHHHhhc
Confidence 9999988864
|
Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr |
| >cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-40 Score=305.97 Aligned_cols=236 Identities=15% Similarity=0.182 Sum_probs=187.2
Q ss_pred CCCcccceeee--ecceecccccCCCc---hhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHhHh
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESSD---LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHL 76 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~~---~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~l 76 (424)
|++|.||.+.+ .+..+++|++.... ...+.+.+|+.+++.++||||+++++++..++..++||||+++++|..+.
T Consensus 12 g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~l~~~~ 91 (287)
T cd07848 12 GAYGVVLKCRHKETKEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQENIVELKEAFRRRGKLYLVFEYVEKNMLELLE 91 (287)
T ss_pred cCCEEEEEEEECCCCcEEEEEEEecccccccchhhHHHHHHHHHhCCCccccchhhhEecCCEEEEEEecCCCCHHHHHH
Confidence 89999999988 35567777765432 23567889999999999999999999999999999999999998776654
Q ss_pred ccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCC-----CccccCccCC
Q 014478 77 FHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG-----KSYSTNLAFT 151 (424)
Q Consensus 77 ~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~-----~~~~gt~~y~ 151 (424)
.. ...+++..+..++.|++.||.|||+.+ ++||||||+||+++.++.+||+|||+++..... ....||..|+
T Consensus 92 ~~--~~~~~~~~~~~~~~qi~~~L~~lH~~~-i~H~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~ 168 (287)
T cd07848 92 EM--PNGVPPEKVRSYIYQLIKAIHWCHKND-IVHRDIKPENLLISHNDVLKLCDFGFARNLSEGSNANYTEYVATRWYR 168 (287)
T ss_pred hc--CCCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCCHHHEEEcCCCcEEEeeccCcccccccccccccccccccccC
Confidence 32 457899999999999999999999999 999999999999999999999999998865432 2346889999
Q ss_pred CccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhh-------------hcc-----cC-------
Q 014478 152 PPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLM-------------DSA-----LE------- 206 (424)
Q Consensus 152 aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~-------------~~~-----~~------- 206 (424)
|||++.+..++.++|||||||++|||++|+.||+......... ...... ++. ..
T Consensus 169 aPE~~~~~~~~~~~DiwslGvil~el~~g~~pf~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (287)
T cd07848 169 SPELLLGAPYGKAVDMWSVGCILGELSDGQPLFPGESEIDQLF-TIQKVLGPLPAEQMKLFYSNPRFHGLRFPAVNHPQS 247 (287)
T ss_pred CcHHHcCCCCCCchhHHhHHHHHHHHHhCCCCCCCCCHHHHHH-HHHHhhCCCCHHHHHhhhccchhcccccCcccCccc
Confidence 9999998889999999999999999999998887542111000 000000 000 00
Q ss_pred --CCCCchhHHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 014478 207 --GHFSNDEGTELVRLASRCLQSEARERPNAKSLVIS 241 (424)
Q Consensus 207 --~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~~~~~ 241 (424)
......++.++.+|+.+||+.||++|||++++++|
T Consensus 248 ~~~~~~~~~s~~~~dll~~~L~~~P~~R~s~~~~l~h 284 (287)
T cd07848 248 LERRYLGILSGVLLDLMKNLLKLNPTDRYLTEQCLNH 284 (287)
T ss_pred HHHhhhcccCHHHHHHHHHHccCCcccCCCHHHHhcC
Confidence 00111256789999999999999999999999864
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes |
| >cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.5e-40 Score=308.68 Aligned_cols=230 Identities=18% Similarity=0.260 Sum_probs=187.0
Q ss_pred CCCcccceeee--ecceecccccCCCc----hhhhHHHHHHHHH---hcCCCcCcceeEEEEEeCCeeeEEEecCCCCCH
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESSD----LGETLNLEEAKAV---GNLRSERLANLIGCCYEADERLLVAEFMPNETL 72 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~~----~~~~~~~~E~~~l---~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL 72 (424)
|++|.||.+.+ .+..+++|++.... ...+.+.+|++++ +.++||||+++++++..++..++||||++||+|
T Consensus 10 G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~~~~~~lv~E~~~~~~L 89 (324)
T cd05589 10 GHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACFQTEDHVCFVMEYAAGGDL 89 (324)
T ss_pred cCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEEEcCCEEEEEEcCCCCCcH
Confidence 89999999987 45678888775432 2234566676655 566899999999999999999999999999999
Q ss_pred HhHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCC----CCccccCc
Q 014478 73 AKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRD----GKSYSTNL 148 (424)
Q Consensus 73 ~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~----~~~~~gt~ 148 (424)
..++. ...+++.++..++.||+.||.|||+++ ++||||||+||+++.++.+||+|||+++.... .....||+
T Consensus 90 ~~~~~---~~~l~~~~~~~~~~qi~~al~~lH~~~-ivHrdlkp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~g~~ 165 (324)
T cd05589 90 MMHIH---TDVFSEPRAVFYAACVVLGLQYLHENK-IVYRDLKLDNLLLDTEGFVKIADFGLCKEGMGFGDRTSTFCGTP 165 (324)
T ss_pred HHHhh---cCCCCHHHHHHHHHHHHHHHHHHHhCC-eEecCCCHHHeEECCCCcEEeCcccCCccCCCCCCcccccccCc
Confidence 99884 357999999999999999999999999 99999999999999999999999999875332 22356899
Q ss_pred cCCCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHHHHHHHHHhcccC
Q 014478 149 AFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSE 228 (424)
Q Consensus 149 ~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~d 228 (424)
.|||||.+.+..++.++|||||||++|+|++|+.||......... ..+... ....+..++.++.++|.+||+.|
T Consensus 166 ~y~aPE~~~~~~~~~~~DiwslG~il~el~~G~~pf~~~~~~~~~----~~i~~~--~~~~p~~~~~~~~~li~~~L~~d 239 (324)
T cd05589 166 EFLAPEVLTETSYTRAVDWWGLGVLIYEMLVGESPFPGDDEEEVF----DSIVND--EVRYPRFLSREAISIMRRLLRRN 239 (324)
T ss_pred cccCHhHhcCCCCCcccchhhHHHHHHHHHhCCCCCCCCCHHHHH----HHHHhC--CCCCCCCCCHHHHHHHHHHhhcC
Confidence 999999999888999999999999999999999888754222111 111111 12345567889999999999999
Q ss_pred cCCCC-----CHHHHHHH
Q 014478 229 ARERP-----NAKSLVIS 241 (424)
Q Consensus 229 p~~Rp-----s~~~~~~~ 241 (424)
|.+|| ++.+++++
T Consensus 240 P~~R~~~~~~~~~~l~~~ 257 (324)
T cd05589 240 PERRLGSGEKDAEDVKKQ 257 (324)
T ss_pred HhHcCCCCCCCHHHHhhC
Confidence 99999 57777665
|
Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved |
| >cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-39 Score=297.69 Aligned_cols=232 Identities=19% Similarity=0.294 Sum_probs=184.6
Q ss_pred CCCcccceeeeec--------------ceecccccCCCch-hhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEec
Q 014478 2 GGRCSKFSICWFH--------------CHLKSSVLESSDL-GETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEF 66 (424)
Q Consensus 2 G~~g~v~~~~~~~--------------~~v~~~~~~~~~~-~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 66 (424)
|++|.||.+.+.. ..+++|++..+.. ....|.+|+.++..++||||+++++++..+...++||||
T Consensus 6 G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~ 85 (262)
T cd05077 6 GTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSHRDISLAFFETASMMRQVSHKHIVLLYGVCVRDVENIMVEEF 85 (262)
T ss_pred CCcceEeeeecccCCCccccccchhhceeEEEeecChhhhhHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCEEEEec
Confidence 8999999997632 1355565554433 345788899999999999999999999998889999999
Q ss_pred CCCCCHHhHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCC-------eEEccccccccCC
Q 014478 67 MPNETLAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGN-------PRLSSFGLMKNSR 139 (424)
Q Consensus 67 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~-------~kl~Dfg~~~~~~ 139 (424)
+++|+|..++.. ....+++.++++++.||+.||.|||+++ ++||||||+|||++.++. ++++|||++....
T Consensus 86 ~~~~~l~~~~~~-~~~~~~~~~~~~i~~qi~~~l~~lH~~~-ivH~dlkp~Nill~~~~~~~~~~~~~~l~d~g~~~~~~ 163 (262)
T cd05077 86 VEFGPLDLFMHR-KSDVLTTPWKFKVAKQLASALSYLEDKD-LVHGNVCTKNILLAREGIDGECGPFIKLSDPGIPITVL 163 (262)
T ss_pred ccCCCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHhhhCC-eECCCCCcccEEEecCCccCCCCceeEeCCCCCCcccc
Confidence 999999988854 3456899999999999999999999999 999999999999987664 8999999988766
Q ss_pred CCCccccCccCCCccccc-cCCCCCCcceehhHHHHHHHh-hCCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHHH
Q 014478 140 DGKSYSTNLAFTPPEYMR-TGRVTPESVVYSFGTMLLDLL-SGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTEL 217 (424)
Q Consensus 140 ~~~~~~gt~~y~aPE~~~-~~~~~~~~Dv~slG~~l~el~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 217 (424)
......++..|+|||++. +..++.++|||||||++|||+ +|..|+....... . ........ ......+.++
T Consensus 164 ~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~--~---~~~~~~~~--~~~~~~~~~~ 236 (262)
T cd05077 164 SRQECVERIPWIAPECVEDSKNLSIAADKWSFGTTLWEICYNGEIPLKDKTLAE--K---ERFYEGQC--MLVTPSCKEL 236 (262)
T ss_pred CcccccccccccChhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcchhH--H---HHHHhcCc--cCCCCChHHH
Confidence 555667889999999987 456889999999999999998 4665554431111 1 11111111 1222346789
Q ss_pred HHHHHHhcccCcCCCCCHHHHHHHH
Q 014478 218 VRLASRCLQSEARERPNAKSLVISL 242 (424)
Q Consensus 218 ~~li~~cl~~dp~~Rps~~~~~~~l 242 (424)
.+++.+||+.||.+||++.+++..+
T Consensus 237 ~~li~~cl~~dp~~Rp~~~~il~~~ 261 (262)
T cd05077 237 ADLMTHCMNYDPNQRPFFRAIMRDI 261 (262)
T ss_pred HHHHHHHcCCChhhCcCHHHHHHhc
Confidence 9999999999999999999998765
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom |
| >cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-39 Score=301.35 Aligned_cols=241 Identities=22% Similarity=0.325 Sum_probs=190.6
Q ss_pred CCCcccceeee------ecceecccccCCCc--hhhhHHHHHHHHHhcCCCcCcceeEEEEEeC--CeeeEEEecCCCCC
Q 014478 2 GGRCSKFSICW------FHCHLKSSVLESSD--LGETLNLEEAKAVGNLRSERLANLIGCCYEA--DERLLVAEFMPNET 71 (424)
Q Consensus 2 G~~g~v~~~~~------~~~~v~~~~~~~~~--~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~--~~~~lv~e~~~~gs 71 (424)
|++|.||.+.+ .+..+++|++.... .....|.+|+++++.++||||+++++++... ...++||||+++++
T Consensus 15 g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~~~~~~ 94 (283)
T cd05080 15 GHFGKVSLYCYDPANDGTGEMVAVKTLKRECGQQNTSGWKKEINILKTLYHENIVKYKGCCSEQGGKGLQLIMEYVPLGS 94 (283)
T ss_pred CCCcEEEEeeEccccCCCCceEEEEEeccccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCceEEEEecCCCCCC
Confidence 88999987654 34456777665432 2456788999999999999999999998764 35789999999999
Q ss_pred HHhHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCCC-------cc
Q 014478 72 LAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGK-------SY 144 (424)
Q Consensus 72 L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~~-------~~ 144 (424)
|.+++.. ..+++.+++.++.|++.||.|||+++ ++||||||+||+++.++.++|+|||+++...... ..
T Consensus 95 l~~~~~~---~~l~~~~~~~i~~~l~~~l~~lH~~~-i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~ 170 (283)
T cd05080 95 LRDYLPK---HKLNLAQLLLFAQQICEGMAYLHSQH-YIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDG 170 (283)
T ss_pred HHHHHHH---cCCCHHHHHHHHHHHHHHHHHHHHCC-eeccccChheEEEcCCCcEEEeecccccccCCcchhhccCCCC
Confidence 9999953 46999999999999999999999999 9999999999999999999999999988654322 12
Q ss_pred ccCccCCCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhH---HH-------hhhhhhHhhhcccCCCCCchhH
Q 014478 145 STNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALD---LI-------RSKNFLLLMDSALEGHFSNDEG 214 (424)
Q Consensus 145 ~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~---~~-------~~~~~~~~~~~~~~~~~~~~~~ 214 (424)
.++..|+|||++.+..++.++||||||+++|+|++|..|+...... .. .................+..++
T Consensus 171 ~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (283)
T cd05080 171 DSPVFWYAVECLKENKFSYASDVWSFGVTLYELLTHCDSKQSPPKKFEEMIGPKQGQMTVVRLIELLERGMRLPCPKNCP 250 (283)
T ss_pred CCCceeeCHhHhcccCCCcccccHHHHHHHHHHHhCCCCCCCCcchhhhhhcccccccchhhhhhhhhcCCCCCCCCCCC
Confidence 3456799999998888999999999999999999999776432111 00 0011111122222223455678
Q ss_pred HHHHHHHHHhcccCcCCCCCHHHHHHHHHHHh
Q 014478 215 TELVRLASRCLQSEARERPNAKSLVISLMSLQ 246 (424)
Q Consensus 215 ~~l~~li~~cl~~dp~~Rps~~~~~~~l~~~~ 246 (424)
.++.+++.+||..||++|||+++++..|+.+.
T Consensus 251 ~~~~~li~~cl~~~p~~Rps~~~i~~~l~~~~ 282 (283)
T cd05080 251 QEVYILMKNCWETEAKFRPTFRSLIPILKEMH 282 (283)
T ss_pred HHHHHHHHHHhccChhhCCCHHHHHHHHHHhh
Confidence 89999999999999999999999999988763
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign |
| >cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-39 Score=303.90 Aligned_cols=239 Identities=19% Similarity=0.307 Sum_probs=193.1
Q ss_pred CCCcccceeeee-------cceecccccCCCc--hhhhHHHHHHHHHhcC-CCcCcceeEEEEEeCCeeeEEEecCCCCC
Q 014478 2 GGRCSKFSICWF-------HCHLKSSVLESSD--LGETLNLEEAKAVGNL-RSERLANLIGCCYEADERLLVAEFMPNET 71 (424)
Q Consensus 2 G~~g~v~~~~~~-------~~~v~~~~~~~~~--~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~~~~gs 71 (424)
|++|.||.+.+. +..+++|++.... ...+.+.+|+.+++++ +||||+++++++...+..++||||+++|+
T Consensus 46 G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~~~ 125 (302)
T cd05055 46 GAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSEREALMSELKIMSHLGNHENIVNLLGACTIGGPILVITEYCCYGD 125 (302)
T ss_pred cCCeeEEEEEEecCCCCCceeEEEEEecCccCChHHHHHHHHHHHHHHhccCCCCcceEEEEEecCCceEEEEEcCCCCc
Confidence 889999988753 2346666665432 3356788999999999 79999999999999999999999999999
Q ss_pred HHhHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCCC------ccc
Q 014478 72 LAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGK------SYS 145 (424)
Q Consensus 72 L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~~------~~~ 145 (424)
|.+++.......+++.++..++.|++.||.|||+++ ++|+||||+||+++.++.++|+|||+++...... ...
T Consensus 126 L~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~-ivH~dlkp~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~ 204 (302)
T cd05055 126 LLNFLRRKRESFLTLEDLLSFSYQVAKGMAFLASKN-CIHRDLAARNVLLTHGKIVKICDFGLARDIMNDSNYVVKGNAR 204 (302)
T ss_pred HHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC-eehhhhccceEEEcCCCeEEECCCcccccccCCCceeecCCCC
Confidence 999996533445899999999999999999999999 9999999999999999999999999987654322 223
Q ss_pred cCccCCCccccccCCCCCCcceehhHHHHHHHhh-CCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHHHHHHHHHh
Q 014478 146 TNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRC 224 (424)
Q Consensus 146 gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c 224 (424)
++..|+|||.+.+..++.++|||||||++|+|++ |..|+...... ..+............+...++++.+++.+|
T Consensus 205 ~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~t~g~~p~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~li~~c 280 (302)
T cd05055 205 LPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSNPYPGMPVD----SKFYKLIKEGYRMAQPEHAPAEIYDIMKTC 280 (302)
T ss_pred cccccCCHhhhccCCCCcHhHHHHHHHHHHHHHhCCCCCcCCCCch----HHHHHHHHcCCcCCCCCCCCHHHHHHHHHH
Confidence 5678999999998889999999999999999998 88776543211 112222222222233445678999999999
Q ss_pred cccCcCCCCCHHHHHHHHHHH
Q 014478 225 LQSEARERPNAKSLVISLMSL 245 (424)
Q Consensus 225 l~~dp~~Rps~~~~~~~l~~~ 245 (424)
|..+|++|||+.+++..|.++
T Consensus 281 l~~~p~~Rpt~~ell~~l~~~ 301 (302)
T cd05055 281 WDADPLKRPTFKQIVQLIGKQ 301 (302)
T ss_pred cCCCchhCcCHHHHHHHHHhh
Confidence 999999999999999998764
|
Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept |
| >cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.3e-40 Score=298.10 Aligned_cols=233 Identities=23% Similarity=0.306 Sum_probs=187.2
Q ss_pred CCCcccceeeeec---------ceecccccCCCc-hhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCC
Q 014478 2 GGRCSKFSICWFH---------CHLKSSVLESSD-LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNET 71 (424)
Q Consensus 2 G~~g~v~~~~~~~---------~~v~~~~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gs 71 (424)
||||.||++.+.. ..+++|.+.... ...+.+.+|+.+++.+.||||+++++++..+...++||||+++|+
T Consensus 6 G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~~~g~ 85 (258)
T cd05078 6 GTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSHRNYSESFFEAASMMSQLSHKHLVLNYGVCVCGDESIMVQEYVKFGS 85 (258)
T ss_pred ccchhheeeeecccccccccccchhhHHhhcchhHHHHHHHHHHHHHHHhCCCCChhheeeEEEeCCCcEEEEecCCCCc
Confidence 8999999998732 225555554433 234678899999999999999999999999889999999999999
Q ss_pred HHhHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCC--------eEEccccccccCCCCCc
Q 014478 72 LAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGN--------PRLSSFGLMKNSRDGKS 143 (424)
Q Consensus 72 L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~--------~kl~Dfg~~~~~~~~~~ 143 (424)
|.+++... +..+++..+..++.||+.||.|||+++ ++||||||+||+++.++. ++++|||++........
T Consensus 86 L~~~l~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~-iiH~dlkp~nili~~~~~~~~~~~~~~~l~d~g~~~~~~~~~~ 163 (258)
T cd05078 86 LDTYLKKN-KNLINISWKLEVAKQLAWALHFLEDKG-LTHGNVCAKNVLLIREEDRKTGNPPFIKLSDPGISITVLPKEI 163 (258)
T ss_pred HHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCccceEEEecccccccCCCceEEecccccccccCCchh
Confidence 99999652 346899999999999999999999999 999999999999987765 69999999887666666
Q ss_pred cccCccCCCccccccC-CCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHHHHHHHH
Q 014478 144 YSTNLAFTPPEYMRTG-RVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLAS 222 (424)
Q Consensus 144 ~~gt~~y~aPE~~~~~-~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 222 (424)
..++..|+|||++.+. .++.++||||||+++|+|++|..++.... .... ...... .....+...+.++.+++.
T Consensus 164 ~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~~~~~~~-~~~~---~~~~~~--~~~~~~~~~~~~~~~li~ 237 (258)
T cd05078 164 LLERIPWVPPECIENPQNLSLAADKWSFGTTLWEIFSGGDKPLSAL-DSQK---KLQFYE--DRHQLPAPKWTELANLIN 237 (258)
T ss_pred ccccCCccCchhccCCCCCCchhhHHHHHHHHHHHHcCCCCChhhc-cHHH---HHHHHH--ccccCCCCCcHHHHHHHH
Confidence 7788999999999864 47899999999999999999964433221 1111 111111 122344455678999999
Q ss_pred HhcccCcCCCCCHHHHHHHH
Q 014478 223 RCLQSEARERPNAKSLVISL 242 (424)
Q Consensus 223 ~cl~~dp~~Rps~~~~~~~l 242 (424)
+||+.||++|||++++++.|
T Consensus 238 ~~l~~~p~~Rps~~~il~~l 257 (258)
T cd05078 238 QCMDYEPDFRPSFRAIIRDL 257 (258)
T ss_pred HHhccChhhCCCHHHHHHhc
Confidence 99999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity |
| >cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-39 Score=301.14 Aligned_cols=241 Identities=22% Similarity=0.275 Sum_probs=193.2
Q ss_pred CCCcccceeeee-------cceecccccCCC-chhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHH
Q 014478 2 GGRCSKFSICWF-------HCHLKSSVLESS-DLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLA 73 (424)
Q Consensus 2 G~~g~v~~~~~~-------~~~v~~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~ 73 (424)
||+|.||.+... ...+++|.+... ......+.+|+.++++++||||+++++++...+..++||||+++++|.
T Consensus 16 G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~ 95 (288)
T cd05093 16 GAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIMVFEYMKHGDLN 95 (288)
T ss_pred cCCeeEEeeEeccCCCCCcceEEEEEecCCcCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccEEEEEcCCCCCHH
Confidence 889999988742 233555655433 344667999999999999999999999999999999999999999999
Q ss_pred hHhccCC-----------CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCC-
Q 014478 74 KHLFHWE-----------TQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG- 141 (424)
Q Consensus 74 ~~l~~~~-----------~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~- 141 (424)
+++.... ...+++.+++.++.|++.||.|||+++ ++||||||+||+++.++.++|+|||+++.....
T Consensus 96 ~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~~~-i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~ 174 (288)
T cd05093 96 KFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLASQH-FVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTD 174 (288)
T ss_pred HHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCC-eeecccCcceEEEccCCcEEeccCCccccccCCc
Confidence 9985321 135899999999999999999999999 999999999999999999999999998755322
Q ss_pred -----CccccCccCCCccccccCCCCCCcceehhHHHHHHHhh-CCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHH
Q 014478 142 -----KSYSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGT 215 (424)
Q Consensus 142 -----~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (424)
....++..|+|||++.+..++.++|||||||++|+|++ |..||....... ....+........+..++.
T Consensus 175 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~~l~t~g~~p~~~~~~~~-----~~~~i~~~~~~~~~~~~~~ 249 (288)
T cd05093 175 YYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNE-----VIECITQGRVLQRPRTCPK 249 (288)
T ss_pred eeecCCCCCccccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHH-----HHHHHHcCCcCCCCCCCCH
Confidence 12234678999999998889999999999999999998 776665432111 1111111222223445678
Q ss_pred HHHHHHHHhcccCcCCCCCHHHHHHHHHHHhhh
Q 014478 216 ELVRLASRCLQSEARERPNAKSLVISLMSLQKE 248 (424)
Q Consensus 216 ~l~~li~~cl~~dp~~Rps~~~~~~~l~~~~~~ 248 (424)
++.+++.+||+.||.+|||+.+++..|+.+...
T Consensus 250 ~l~~li~~~l~~~p~~Rpt~~~v~~~l~~~~~~ 282 (288)
T cd05093 250 EVYDLMLGCWQREPHMRLNIKEIHSLLQNLAKA 282 (288)
T ss_pred HHHHHHHHHccCChhhCCCHHHHHHHHHHHHHh
Confidence 899999999999999999999999999888754
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly |
| >cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-39 Score=300.90 Aligned_cols=237 Identities=16% Similarity=0.195 Sum_probs=192.1
Q ss_pred CCCcccceeeeec-------ceecccccCCCc--hhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCH
Q 014478 2 GGRCSKFSICWFH-------CHLKSSVLESSD--LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETL 72 (424)
Q Consensus 2 G~~g~v~~~~~~~-------~~v~~~~~~~~~--~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL 72 (424)
||+|.||.+.+.+ ..+++|++.... ...+.|.+|+.++..++||||+++++++......++++||+++++|
T Consensus 16 G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~~~~e~~~~~~l 95 (283)
T cd05091 16 DRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEGPLREEFKHEAMMRSRLQHPNIVCLLGVVTKEQPLSMIFSYCSHSDL 95 (283)
T ss_pred CCCCeEEEEEEecCCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcCCCceEEEEEcCCCCcH
Confidence 8899999998743 457777775433 2246788999999999999999999999999999999999999999
Q ss_pred HhHhccC--------------CCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccC
Q 014478 73 AKHLFHW--------------ETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNS 138 (424)
Q Consensus 73 ~~~l~~~--------------~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~ 138 (424)
.+++... ....+++..+.+++.|++.||.|||+++ ++||||||+||++++++.+||+|||+++..
T Consensus 96 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~~g-i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~ 174 (283)
T cd05091 96 HEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSSHH-VVHKDLATRNVLVFDKLNVKISDLGLFREV 174 (283)
T ss_pred HHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHcC-ccccccchhheEecCCCceEeccccccccc
Confidence 9998421 1235788999999999999999999999 999999999999999999999999998865
Q ss_pred CCCC------ccccCccCCCccccccCCCCCCcceehhHHHHHHHhh-CCCCCCchhhHHHhhhhhhHhhhcccCCCCCc
Q 014478 139 RDGK------SYSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKNFLLLMDSALEGHFSN 211 (424)
Q Consensus 139 ~~~~------~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 211 (424)
.... ...+++.|+|||++.++.++.++|||||||++|||++ |..|+..... ......+........+.
T Consensus 175 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~-----~~~~~~i~~~~~~~~~~ 249 (283)
T cd05091 175 YAADYYKLMGNSLLPIRWMSPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSN-----QDVIEMIRNRQVLPCPD 249 (283)
T ss_pred ccchheeeccCccCCccccCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCH-----HHHHHHHHcCCcCCCCC
Confidence 4322 2234678999999988889999999999999999998 6656554211 12222222333334566
Q ss_pred hhHHHHHHHHHHhcccCcCCCCCHHHHHHHHHH
Q 014478 212 DEGTELVRLASRCLQSEARERPNAKSLVISLMS 244 (424)
Q Consensus 212 ~~~~~l~~li~~cl~~dp~~Rps~~~~~~~l~~ 244 (424)
.++..+.+++.+||+.+|.+||++.+|+..|+.
T Consensus 250 ~~~~~~~~li~~cl~~~p~~RP~~~~i~~~l~~ 282 (283)
T cd05091 250 DCPAWVYTLMLECWNEFPSRRPRFKDIHSRLRT 282 (283)
T ss_pred CCCHHHHHHHHHHhCCCcccCCCHHHHHHHhhC
Confidence 788899999999999999999999999988753
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly |
| >cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-39 Score=303.46 Aligned_cols=242 Identities=19% Similarity=0.223 Sum_probs=192.0
Q ss_pred CCCcccceeeeec--c--eecccccCC--CchhhhHHHHHHHHHhcC-CCcCcceeEEEEEeCCeeeEEEecCCCCCHHh
Q 014478 2 GGRCSKFSICWFH--C--HLKSSVLES--SDLGETLNLEEAKAVGNL-RSERLANLIGCCYEADERLLVAEFMPNETLAK 74 (424)
Q Consensus 2 G~~g~v~~~~~~~--~--~v~~~~~~~--~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~ 74 (424)
|+||.||.+.+.. . .++++.+.. +......+.+|++++.++ +||||+++++++..++..++||||+++|+|.+
T Consensus 18 G~~g~V~~a~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~ 97 (303)
T cd05088 18 GNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLD 97 (303)
T ss_pred CCCceEEEEEEccCCceeeEEEEEecccCCHHHHHHHHHHHHHHHHhcCCCCcceEEEEECCCCCceEEEEeCCCCcHHH
Confidence 8899999998733 2 234444432 223456788999999999 89999999999999999999999999999999
Q ss_pred HhccCC--------------CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCC
Q 014478 75 HLFHWE--------------TQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRD 140 (424)
Q Consensus 75 ~l~~~~--------------~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~ 140 (424)
++.... ...+++.+++.++.|++.||.|||+++ ++||||||+|||++.++.+||+|||+++....
T Consensus 98 ~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~g-i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~ 176 (303)
T cd05088 98 FLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQ-FIHRDLAARNILVGENYVAKIADFGLSRGQEV 176 (303)
T ss_pred HHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHhCC-ccccccchheEEecCCCcEEeCccccCcccch
Confidence 986421 235789999999999999999999999 99999999999999999999999999864322
Q ss_pred C---CccccCccCCCccccccCCCCCCcceehhHHHHHHHhh-CCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHH
Q 014478 141 G---KSYSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTE 216 (424)
Q Consensus 141 ~---~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (424)
. ....++..|+|||.+.+..++.++|||||||++|||+| |..||....... .............+...+++
T Consensus 177 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~ 251 (303)
T cd05088 177 YVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAE-----LYEKLPQGYRLEKPLNCDDE 251 (303)
T ss_pred hhhcccCCCcccccCHHHHhccCCcccccchhhhhHHHHHHhcCCCCcccCChHH-----HHHHHhcCCcCCCCCCCCHH
Confidence 1 11233567999999988888999999999999999998 887765432111 11112222222334456788
Q ss_pred HHHHHHHhcccCcCCCCCHHHHHHHHHHHhhhh
Q 014478 217 LVRLASRCLQSEARERPNAKSLVISLMSLQKEA 249 (424)
Q Consensus 217 l~~li~~cl~~dp~~Rps~~~~~~~l~~~~~~~ 249 (424)
+.+++.+||+.+|++||++.+++..|..+....
T Consensus 252 ~~~li~~~l~~~p~~Rp~~~~il~~l~~~~~~~ 284 (303)
T cd05088 252 VYDLMRQCWREKPYERPSFAQILVSLNRMLEER 284 (303)
T ss_pred HHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhh
Confidence 999999999999999999999999998876653
|
Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A |
| >cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-39 Score=298.61 Aligned_cols=239 Identities=17% Similarity=0.231 Sum_probs=190.3
Q ss_pred CCCcccceeeee--cc----eecccccCCCc--hhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHH
Q 014478 2 GGRCSKFSICWF--HC----HLKSSVLESSD--LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLA 73 (424)
Q Consensus 2 G~~g~v~~~~~~--~~----~v~~~~~~~~~--~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~ 73 (424)
||+|.||.+.|. +. .+++|.+.... .....+..|+..+.++.||||+++++++.. ...++++||+++|+|.
T Consensus 18 G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~iv~~~~~~~~-~~~~~i~e~~~~gsL~ 96 (279)
T cd05111 18 GVFGTVHKGIWIPEGDSIKIPVAIKTIQDRSGRQTFQEITDHMLAMGSLDHAYIVRLLGICPG-ASLQLVTQLSPLGSLL 96 (279)
T ss_pred cCCcceEEEEEcCCCCceeeEEEEeecccccchHHHHHHHHHHHHHhcCCCCCcceEEEEECC-CccEEEEEeCCCCcHH
Confidence 899999999983 33 24445443221 223567788889999999999999999864 4578999999999999
Q ss_pred hHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCC------CccccC
Q 014478 74 KHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG------KSYSTN 147 (424)
Q Consensus 74 ~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~------~~~~gt 147 (424)
+++.. ....+++..+..++.||+.||.|||+++ ++||||||+||+++.++.+||+|||+++..... ....++
T Consensus 97 ~~l~~-~~~~~~~~~~~~i~~qi~~~l~~lH~~~-iiH~dlkp~nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~ 174 (279)
T cd05111 97 DHVRQ-HRDSLDPQRLLNWCVQIAKGMYYLEEHR-MVHRNLAARNILLKSDSIVQIADFGVADLLYPDDKKYFYSEHKTP 174 (279)
T ss_pred HHHHh-cccCCCHHHHHHHHHHHHHHHHHHHHCC-EeccccCcceEEEcCCCcEEEcCCccceeccCCCcccccCCCCCc
Confidence 99964 3457899999999999999999999999 999999999999999999999999999765322 123456
Q ss_pred ccCCCccccccCCCCCCcceehhHHHHHHHhh-CCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHHHHHHHHHhcc
Q 014478 148 LAFTPPEYMRTGRVTPESVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQ 226 (424)
Q Consensus 148 ~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~ 226 (424)
..|+|||++.++.++.++|||||||++|||++ |..|+...... .....+........+..++.++.+++.+||.
T Consensus 175 ~~y~~pE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~li~~c~~ 249 (279)
T cd05111 175 IKWMALESILFGRYTHQSDVWSYGVTVWEMMSYGAEPYAGMRPH-----EVPDLLEKGERLAQPQICTIDVYMVMVKCWM 249 (279)
T ss_pred ccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCCCCCHH-----HHHHHHHCCCcCCCCCCCCHHHHHHHHHHcC
Confidence 78999999998889999999999999999998 88777653211 1122222222223344567789999999999
Q ss_pred cCcCCCCCHHHHHHHHHHHhhh
Q 014478 227 SEARERPNAKSLVISLMSLQKE 248 (424)
Q Consensus 227 ~dp~~Rps~~~~~~~l~~~~~~ 248 (424)
.||++|||+.++++.|..+.+.
T Consensus 250 ~~p~~Rps~~el~~~l~~~~~~ 271 (279)
T cd05111 250 IDENVRPTFKELANEFTRMARD 271 (279)
T ss_pred CCcccCcCHHHHHHHHHHHHhC
Confidence 9999999999999999887754
|
Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r |
| >cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.7e-40 Score=304.38 Aligned_cols=237 Identities=17% Similarity=0.208 Sum_probs=185.9
Q ss_pred CCCcccceeee--ecceecccccCCCc--hhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHhHhc
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESSD--LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLF 77 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~~--~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~ 77 (424)
|++|.||++.. .+..+++|++.... .....+.+|++++++++||||+++++++...+..++||||+++ +|.+++.
T Consensus 16 G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~-~l~~~l~ 94 (288)
T cd07871 16 GTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKNLKHANIVTLHDIIHTERCLTLVFEYLDS-DLKQYLD 94 (288)
T ss_pred CCCEEEEEEEECCCCCEEEEEEecccccCCcchhHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEEEeCCCc-CHHHHHH
Confidence 89999999976 45677777765332 2345678999999999999999999999998889999999975 9999885
Q ss_pred cCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCC----CccccCccCCCc
Q 014478 78 HWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG----KSYSTNLAFTPP 153 (424)
Q Consensus 78 ~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~----~~~~gt~~y~aP 153 (424)
. .+..+++..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++..... ....+++.|+||
T Consensus 95 ~-~~~~~~~~~~~~~~~qi~~aL~~LH~~~-ivH~dlkp~Nil~~~~~~~kl~DfG~~~~~~~~~~~~~~~~~~~~y~aP 172 (288)
T cd07871 95 N-CGNLMSMHNVKIFMFQLLRGLSYCHKRK-ILHRDLKPQNLLINEKGELKLADFGLARAKSVPTKTYSNEVVTLWYRPP 172 (288)
T ss_pred h-cCCCCCHHHHHHHHHHHHHHHHHHHhCC-cccCCCCHHHEEECCCCCEEECcCcceeeccCCCccccCceecccccCh
Confidence 4 3456889999999999999999999999 999999999999999999999999998764322 234578999999
Q ss_pred ccccc-CCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhh--------------------HhhhcccC----CC
Q 014478 154 EYMRT-GRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFL--------------------LLMDSALE----GH 208 (424)
Q Consensus 154 E~~~~-~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~--------------------~~~~~~~~----~~ 208 (424)
|++.+ ..++.++|||||||++|+|++|+.||.............. ....+... ..
T Consensus 173 E~~~~~~~~~~~~DiwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (288)
T cd07871 173 DVLLGSTEYSTPIDMWGVGCILYEMATGRPMFPGSTVKEELHLIFRLLGTPTEETWPGITSNEEFRSYLFPQYRAQPLIN 252 (288)
T ss_pred HHhcCCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhccccchhhhccccCccCCCchHH
Confidence 99875 4588999999999999999999988875422111100000 00000000 00
Q ss_pred CCchhHHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 014478 209 FSNDEGTELVRLASRCLQSEARERPNAKSLVIS 241 (424)
Q Consensus 209 ~~~~~~~~l~~li~~cl~~dp~~Rps~~~~~~~ 241 (424)
....++.++.++|.+||+.||.+|||++++++|
T Consensus 253 ~~~~~~~~~~dll~~mL~~dp~~R~t~~~~l~h 285 (288)
T cd07871 253 HAPRLDTDGIDLLSSLLLYETKSRISAEAALRH 285 (288)
T ss_pred hCCCCCHHHHHHHHHhcCcCcccCCCHHHHhcC
Confidence 112346789999999999999999999999864
|
Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament |
| >cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-39 Score=296.06 Aligned_cols=236 Identities=22% Similarity=0.297 Sum_probs=192.4
Q ss_pred CCCcccceeeeec-ceecccccCCCchhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHhHhccCC
Q 014478 2 GGRCSKFSICWFH-CHLKSSVLESSDLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWE 80 (424)
Q Consensus 2 G~~g~v~~~~~~~-~~v~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~ 80 (424)
|++|.||.+.+.+ ..+++|.+.......+.+.+|+++++.++||||+++++++.. ...+++|||+++|+|.+++....
T Consensus 17 g~~~~v~~~~~~~~~~~~lK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~v~e~~~~~~L~~~~~~~~ 95 (260)
T cd05069 17 GCFGEVWMGTWNGTTKVAIKTLKPGTMMPEAFLQEAQIMKKLRHDKLVPLYAVVSE-EPIYIVTEFMGKGSLLDFLKEGD 95 (260)
T ss_pred cCCCeEEEEEEcCCceEEEEEcccCCccHHHHHHHHHHHHhCCCCCeeeEEEEEcC-CCcEEEEEcCCCCCHHHHHhhCC
Confidence 8899999998744 356667666555556788999999999999999999998754 56889999999999999997544
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCCC-----ccccCccCCCccc
Q 014478 81 TQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGK-----SYSTNLAFTPPEY 155 (424)
Q Consensus 81 ~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~~-----~~~gt~~y~aPE~ 155 (424)
...+++..+..++.|++.||.|||+.+ ++|+||||+||++++++.++|+|||+++...... ...++..|+|||.
T Consensus 96 ~~~~~~~~~~~~~~~l~~al~~lH~~~-i~H~dl~~~Nill~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~~Pe~ 174 (260)
T cd05069 96 GKYLKLPQLVDMAAQIADGMAYIERMN-YIHRDLRAANILVGDNLVCKIADFGLARLIEDNEYTARQGAKFPIKWTAPEA 174 (260)
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHhCC-EeecccCcceEEEcCCCeEEECCCccceEccCCcccccCCCccchhhCCHHH
Confidence 556899999999999999999999999 9999999999999999999999999987654321 2235678999999
Q ss_pred cccCCCCCCcceehhHHHHHHHhh-CCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHHHHHHHHHhcccCcCCCCC
Q 014478 156 MRTGRVTPESVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERPN 234 (424)
Q Consensus 156 ~~~~~~~~~~Dv~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps 234 (424)
+.+..++.++||||||+++|+|++ |..|+....... .............+...+..+.+++.+||..||++||+
T Consensus 175 ~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~ 249 (260)
T cd05069 175 ALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMVNRE-----VLEQVERGYRMPCPQGCPESLHELMKLCWKKDPDERPT 249 (260)
T ss_pred hccCCcChHHHHHHHHHHHHHHHhCCCCCCCCCCHHH-----HHHHHHcCCCCCCCcccCHHHHHHHHHHccCCcccCcC
Confidence 988889999999999999999999 777766532111 11111122223345567889999999999999999999
Q ss_pred HHHHHHHHHH
Q 014478 235 AKSLVISLMS 244 (424)
Q Consensus 235 ~~~~~~~l~~ 244 (424)
++++++.|+.
T Consensus 250 ~~~i~~~l~~ 259 (260)
T cd05069 250 FEYIQSFLED 259 (260)
T ss_pred HHHHHHHHhc
Confidence 9999988864
|
Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an |
| >cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-39 Score=296.24 Aligned_cols=235 Identities=24% Similarity=0.322 Sum_probs=197.2
Q ss_pred CCCcccceeeee-----cceecccccCCCchh--hhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHh
Q 014478 2 GGRCSKFSICWF-----HCHLKSSVLESSDLG--ETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAK 74 (424)
Q Consensus 2 G~~g~v~~~~~~-----~~~v~~~~~~~~~~~--~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~ 74 (424)
|++|.||.+.+. +..+++|.+...... .+.+.+|++.+..++|+||+++++++..+...++||||+++++|.+
T Consensus 6 g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~ 85 (262)
T cd00192 6 GAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKLGHPNVVRLLGVCTEEEPLYLVLEYMEGGDLLD 85 (262)
T ss_pred CCceEEEEEEEecCCCCCceEEeEeeccccchhHHHHHHHHHHHHhhcCCCChheeeeeecCCCceEEEEEeccCCcHHH
Confidence 899999999986 556777777655433 5788999999999999999999999999889999999999999999
Q ss_pred HhccCC-------CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCC------
Q 014478 75 HLFHWE-------TQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG------ 141 (424)
Q Consensus 75 ~l~~~~-------~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~------ 141 (424)
++.... ...+++.+++.++.|++.||.|||+++ ++||||||+||+++.++.+||+|||.+......
T Consensus 86 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~-i~H~di~p~nili~~~~~~~l~dfg~~~~~~~~~~~~~~ 164 (262)
T cd00192 86 YLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLASKK-FVHRDLAARNCLVGEDLVVKISDFGLSRDVYDDDYYRKK 164 (262)
T ss_pred HHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHcCC-cccCccCcceEEECCCCcEEEcccccccccccccccccc
Confidence 997531 367899999999999999999999999 999999999999999999999999999876543
Q ss_pred CccccCccCCCccccccCCCCCCcceehhHHHHHHHhh-CCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHHHHHH
Q 014478 142 KSYSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRL 220 (424)
Q Consensus 142 ~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 220 (424)
....++..|+|||.+....++.++||||||+++|+|++ |..|+..... ...............+..++.++.++
T Consensus 165 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~l 239 (262)
T cd00192 165 TGGKLPIRWMAPESLKDGIFTSKSDVWSFGVLLWEIFTLGATPYPGLSN-----EEVLEYLRKGYRLPKPEYCPDELYEL 239 (262)
T ss_pred cCCCcCccccCHHHhccCCcchhhccHHHHHHHHHHHhcCCCCCCCCCH-----HHHHHHHHcCCCCCCCccCChHHHHH
Confidence 23456789999999998889999999999999999999 5777665421 11122222233334566678899999
Q ss_pred HHHhcccCcCCCCCHHHHHHHH
Q 014478 221 ASRCLQSEARERPNAKSLVISL 242 (424)
Q Consensus 221 i~~cl~~dp~~Rps~~~~~~~l 242 (424)
+.+||..||.+|||+.+++.+|
T Consensus 240 i~~~l~~~p~~Rps~~~l~~~l 261 (262)
T cd00192 240 MLSCWQLDPEDRPTFSELVERL 261 (262)
T ss_pred HHHHccCCcccCcCHHHHHHhh
Confidence 9999999999999999999876
|
Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan |
| >cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-39 Score=301.27 Aligned_cols=240 Identities=18% Similarity=0.268 Sum_probs=194.5
Q ss_pred CCCcccceeeeec-------ceecccccCCCc--hhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCH
Q 014478 2 GGRCSKFSICWFH-------CHLKSSVLESSD--LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETL 72 (424)
Q Consensus 2 G~~g~v~~~~~~~-------~~v~~~~~~~~~--~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL 72 (424)
||||.||++.+.. ..++++.+.... .....+.+|+.+++.++||||+++++.|..++..+++|||+++|+|
T Consensus 11 g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L 90 (290)
T cd05045 11 GEFGKVVKATAFRLKGRAGYTTVAVKMLKENASSSELRDLLSEFNLLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSL 90 (290)
T ss_pred cCCcceEEEEEecCCCCCcceeEEEEecCCCCCHHHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCCcEEEEEecCCCCH
Confidence 8999999998743 235555554322 3356788999999999999999999999999999999999999999
Q ss_pred HhHhccC----------------------CCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEc
Q 014478 73 AKHLFHW----------------------ETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLS 130 (424)
Q Consensus 73 ~~~l~~~----------------------~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~ 130 (424)
.+++... ...++++.+++.++.|++.||.|||+.+ ++||||||+|||+++++.+||+
T Consensus 91 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~-ivH~dikp~nill~~~~~~kl~ 169 (290)
T cd05045 91 RSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAEMK-LVHRDLAARNVLVAEGRKMKIS 169 (290)
T ss_pred HHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHHHCC-eehhhhhhheEEEcCCCcEEec
Confidence 9987532 1235789999999999999999999999 9999999999999999999999
Q ss_pred cccccccCCCC------CccccCccCCCccccccCCCCCCcceehhHHHHHHHhh-CCCCCCchhhHHHhhhhhhHhhhc
Q 014478 131 SFGLMKNSRDG------KSYSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKNFLLLMDS 203 (424)
Q Consensus 131 Dfg~~~~~~~~------~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~ 203 (424)
|||+++..... ....++..|+|||++.+..++.++||||||+++|||++ |..|++.... .........
T Consensus 170 dfg~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~-----~~~~~~~~~ 244 (290)
T cd05045 170 DFGLSRDVYEEDSYVKRSKGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIAP-----ERLFNLLKT 244 (290)
T ss_pred cccccccccCccchhcccCCCCCccccCHHHHccCCcchHhHHHHHHHHHHHHHhcCCCCCCCCCH-----HHHHHHHhC
Confidence 99998764322 12245678999999988889999999999999999998 8877765321 122222333
Q ss_pred ccCCCCCchhHHHHHHHHHHhcccCcCCCCCHHHHHHHHHHHhh
Q 014478 204 ALEGHFSNDEGTELVRLASRCLQSEARERPNAKSLVISLMSLQK 247 (424)
Q Consensus 204 ~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~~~~~l~~~~~ 247 (424)
......+..++.++.+++.+||+.+|++||++.+++..|+++..
T Consensus 245 ~~~~~~~~~~~~~~~~~i~~cl~~~P~~Rp~~~~i~~~l~~~~~ 288 (290)
T cd05045 245 GYRMERPENCSEEMYNLMLTCWKQEPDKRPTFADISKELEKMMV 288 (290)
T ss_pred CCCCCCCCCCCHHHHHHHHHHccCCcccCCCHHHHHHHHHHHHh
Confidence 33334456678899999999999999999999999999998764
|
Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi |
| >cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-39 Score=298.04 Aligned_cols=238 Identities=20% Similarity=0.240 Sum_probs=188.5
Q ss_pred CCCcccceeeeecc----eecccccCCC---chhhhHHHHHHHHHhcCCCcCcceeEEEEEeC------CeeeEEEecCC
Q 014478 2 GGRCSKFSICWFHC----HLKSSVLESS---DLGETLNLEEAKAVGNLRSERLANLIGCCYEA------DERLLVAEFMP 68 (424)
Q Consensus 2 G~~g~v~~~~~~~~----~v~~~~~~~~---~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~------~~~~lv~e~~~ 68 (424)
|++|.||.+.+... .+++|.+... ....+.+.+|+++++.++||||+++++++... ...++||||++
T Consensus 10 G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~v~e~~~ 89 (272)
T cd05075 10 GEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEFDHPNVMRLIGVCLQTVESEGYPSPVVILPFMK 89 (272)
T ss_pred ccCceEEEeEEccCCCeeeEEEEecccCcCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEccCCcccCCCCcEEEEEeCC
Confidence 89999999987432 3566655432 34466788999999999999999999988542 24689999999
Q ss_pred CCCHHhHhccC----CCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCCC--
Q 014478 69 NETLAKHLFHW----ETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGK-- 142 (424)
Q Consensus 69 ~gsL~~~l~~~----~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~~-- 142 (424)
+|+|.+++... ....+++..+..++.|++.||.|||+++ |+||||||+|||++.++.+||+|||+++......
T Consensus 90 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~-i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~ 168 (272)
T cd05075 90 HGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSSKS-FIHRDLAARNCMLNENMNVCVADFGLSKKIYNGDYY 168 (272)
T ss_pred CCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHHCC-eeccccchhheEEcCCCCEEECCCCcccccCcccce
Confidence 99999887421 2345889999999999999999999999 9999999999999999999999999988654321
Q ss_pred ----ccccCccCCCccccccCCCCCCcceehhHHHHHHHhh-CCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHHH
Q 014478 143 ----SYSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTEL 217 (424)
Q Consensus 143 ----~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 217 (424)
...+++.|++||++.+..++.++|||||||++|||++ |..||+..... .....+........+..++..+
T Consensus 169 ~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~ 243 (272)
T cd05075 169 RQGRIAKMPVKWIAIESLADRVYTTKSDVWSFGVTMWEIATRGQTPYPGVENS-----EIYDYLRQGNRLKQPPDCLDGL 243 (272)
T ss_pred ecCCcccCCcccCCHHHccCCCcChHHHHHHHHHHHHHHHcCCCCCCCCCCHH-----HHHHHHHcCCCCCCCCCCCHHH
Confidence 2235678999999998889999999999999999999 67776543211 1111122222223445677889
Q ss_pred HHHHHHhcccCcCCCCCHHHHHHHHHHH
Q 014478 218 VRLASRCLQSEARERPNAKSLVISLMSL 245 (424)
Q Consensus 218 ~~li~~cl~~dp~~Rps~~~~~~~l~~~ 245 (424)
.+++.+||+.||++|||+.++++.|..+
T Consensus 244 ~~li~~~l~~~p~~Rps~~~l~~~l~~~ 271 (272)
T cd05075 244 YSLMSSCWLLNPKDRPSFETLRCELEKA 271 (272)
T ss_pred HHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 9999999999999999999999998764
|
Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor |
| >cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.6e-40 Score=308.15 Aligned_cols=230 Identities=17% Similarity=0.234 Sum_probs=187.3
Q ss_pred CCCcccceeeee--cceecccccCCC----chhhhHHHHHHHHHhcC-CCcCcceeEEEEEeCCeeeEEEecCCCCCHHh
Q 014478 2 GGRCSKFSICWF--HCHLKSSVLESS----DLGETLNLEEAKAVGNL-RSERLANLIGCCYEADERLLVAEFMPNETLAK 74 (424)
Q Consensus 2 G~~g~v~~~~~~--~~~v~~~~~~~~----~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~ 74 (424)
|+||.||.+.+. +..+++|++... ......+..|..++..+ +||||+++++++.+++..++||||++||+|.+
T Consensus 6 G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~ey~~~g~L~~ 85 (316)
T cd05619 6 GSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQTKENLFFVMEYLNGGDLMF 85 (316)
T ss_pred CCCEEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEEEeCCEEEEEEeCCCCCcHHH
Confidence 899999999873 456788877543 22345567788888765 89999999999999999999999999999999
Q ss_pred HhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCC----CCccccCccC
Q 014478 75 HLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRD----GKSYSTNLAF 150 (424)
Q Consensus 75 ~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~----~~~~~gt~~y 150 (424)
++.. ...+++.++..++.|++.||.|||+++ ++||||||+|||++.++.+||+|||+++.... .....||..|
T Consensus 86 ~l~~--~~~~~~~~~~~~~~qi~~al~~LH~~~-ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y 162 (316)
T cd05619 86 HIQS--CHKFDLPRATFYAAEIICGLQFLHSKG-IVYRDLKLDNILLDTDGHIKIADFGMCKENMLGDAKTCTFCGTPDY 162 (316)
T ss_pred HHHH--cCCCCHHHHHHHHHHHHHHHHHHHhCC-eEeCCCCHHHEEECCCCCEEEccCCcceECCCCCCceeeecCCccc
Confidence 9864 457899999999999999999999999 99999999999999999999999999875322 2345689999
Q ss_pred CCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHHHHHHHHHhcccCcC
Q 014478 151 TPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEAR 230 (424)
Q Consensus 151 ~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~ 230 (424)
+|||++.+..++.++|||||||++|||++|..||........ ...+... ....+..++.++.+++.+||+.||+
T Consensus 163 ~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~~-----~~~i~~~-~~~~~~~~~~~~~~li~~~l~~~P~ 236 (316)
T cd05619 163 IAPEILLGQKYNTSVDWWSFGVLLYEMLIGQSPFHGHDEEEL-----FQSIRMD-NPCYPRWLTREAKDILVKLFVREPE 236 (316)
T ss_pred cCHHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCCCHHHH-----HHHHHhC-CCCCCccCCHHHHHHHHHHhccCHh
Confidence 999999988899999999999999999999988765422111 1111111 1223445678899999999999999
Q ss_pred CCCCHH-HHHH
Q 014478 231 ERPNAK-SLVI 240 (424)
Q Consensus 231 ~Rps~~-~~~~ 240 (424)
+||++. +++.
T Consensus 237 ~R~~~~~~l~~ 247 (316)
T cd05619 237 RRLGVKGDIRQ 247 (316)
T ss_pred hcCCChHHHHc
Confidence 999997 6654
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in |
| >cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-39 Score=299.84 Aligned_cols=236 Identities=19% Similarity=0.290 Sum_probs=190.1
Q ss_pred CCCcccceeeeec-------ceecccccCCC--chhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCH
Q 014478 2 GGRCSKFSICWFH-------CHLKSSVLESS--DLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETL 72 (424)
Q Consensus 2 G~~g~v~~~~~~~-------~~v~~~~~~~~--~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL 72 (424)
|++|.||.+.+.. ..+++|..... ......|.+|+.+++.++|+||+++++++.+....++||||++|++|
T Consensus 17 g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~g~~L 96 (277)
T cd05036 17 GAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEALIMSKFNHQNIVRLIGVSFERLPRFILLELMAGGDL 96 (277)
T ss_pred CCCCcEEEEEEecCCCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCcEEEEecCCCCCH
Confidence 8999999998854 44555555422 23356789999999999999999999999998889999999999999
Q ss_pred HhHhccCC-----CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCC---CeEEccccccccCCCCC--
Q 014478 73 AKHLFHWE-----TQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDG---NPRLSSFGLMKNSRDGK-- 142 (424)
Q Consensus 73 ~~~l~~~~-----~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~---~~kl~Dfg~~~~~~~~~-- 142 (424)
.+++.... ...+++.++++++.||+.||.|||+++ ++||||||+||+++.++ .+||+|||+++......
T Consensus 97 ~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~-ivH~dlkp~nil~~~~~~~~~~kl~dfg~~~~~~~~~~~ 175 (277)
T cd05036 97 KSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEENH-FIHRDIAARNCLLTCKGPGRVAKIADFGMARDIYRASYY 175 (277)
T ss_pred HHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC-EeecccchheEEEeccCCCcceEeccCccccccCCccce
Confidence 99986432 125899999999999999999999999 99999999999998655 58999999988653221
Q ss_pred ----ccccCccCCCccccccCCCCCCcceehhHHHHHHHhh-CCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHHH
Q 014478 143 ----SYSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTEL 217 (424)
Q Consensus 143 ----~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 217 (424)
....+..|+|||++.+..++.++|||||||++|||++ |..||...... .....+........+..++..+
T Consensus 176 ~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~~g~~pf~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~ 250 (277)
T cd05036 176 RKGGRAMLPIKWMPPEAFLDGIFTSKTDVWSFGVLLWEIFSLGYMPYPGRTNQ-----EVMEFVTGGGRLDPPKGCPGPV 250 (277)
T ss_pred ecCCCCCccHhhCCHHHHhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHH-----HHHHHHHcCCcCCCCCCCCHHH
Confidence 1223467999999998889999999999999999997 88777653221 1222222223334556678899
Q ss_pred HHHHHHhcccCcCCCCCHHHHHHHHH
Q 014478 218 VRLASRCLQSEARERPNAKSLVISLM 243 (424)
Q Consensus 218 ~~li~~cl~~dp~~Rps~~~~~~~l~ 243 (424)
.+++.+||+.+|++|||+.+++++|+
T Consensus 251 ~~~i~~cl~~~p~~Rps~~~vl~~l~ 276 (277)
T cd05036 251 YRIMTDCWQHTPEDRPNFATILERIQ 276 (277)
T ss_pred HHHHHHHcCCCcccCcCHHHHHHHhh
Confidence 99999999999999999999999885
|
Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well |
| >KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-40 Score=292.77 Aligned_cols=237 Identities=19% Similarity=0.246 Sum_probs=190.4
Q ss_pred CCCCcccceeee--ecceecccccC---CCchhhhHHHHHHHHHhcCCCcCcceeEEEEEe-----CCeeeEEEecCCCC
Q 014478 1 MGGRCSKFSICW--FHCHLKSSVLE---SSDLGETLNLEEAKAVGNLRSERLANLIGCCYE-----ADERLLVAEFMPNE 70 (424)
Q Consensus 1 ~G~~g~v~~~~~--~~~~v~~~~~~---~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-----~~~~~lv~e~~~~g 70 (424)
.|++|.|+++.. .+..|++|++. .+....++..+|+++|+.++|+||+.+.+++.. -+..|+|+|+|+ .
T Consensus 32 ~GAyGvVcsA~~~~t~~~VAIKKi~~~F~~~~~akRtlRElklLr~~~HeNIi~l~di~~p~~~~~f~DvYiV~elMe-t 110 (359)
T KOG0660|consen 32 RGAYGVVCSAKDKRTGEKVAIKKILNPFENQIDAKRTLRELKLLRHLRHENIIGLLDIFRPPSRDKFNDVYLVFELME-T 110 (359)
T ss_pred CcceeeEEEEEEcCCCCEeehhhhhhhhhchHHHHHHHHHHHHHHHhcCCCcceEEeecccccccccceeEEehhHHh-h
Confidence 388999999887 67888988886 344567889999999999999999999999876 245899999995 4
Q ss_pred CHHhHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCC------Ccc
Q 014478 71 TLAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG------KSY 144 (424)
Q Consensus 71 sL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~------~~~ 144 (424)
+|...++. ++.++...+.-++.|+++||+|+|+.+ |+||||||+|+|++.+..+||+|||+|+..... +..
T Consensus 111 DL~~iik~--~~~L~d~H~q~f~YQiLrgLKyiHSAn-ViHRDLKPsNll~n~~c~lKI~DFGLAR~~~~~~~~~~mTeY 187 (359)
T KOG0660|consen 111 DLHQIIKS--QQDLTDDHAQYFLYQILRGLKYIHSAN-VIHRDLKPSNLLLNADCDLKICDFGLARYLDKFFEDGFMTEY 187 (359)
T ss_pred HHHHHHHc--CccccHHHHHHHHHHHHHhcchhhccc-ccccccchhheeeccCCCEEeccccceeeccccCcccchhcc
Confidence 99999964 456999999999999999999999999 999999999999999999999999999987531 345
Q ss_pred ccCccCCCcccccc-CCCCCCcceehhHHHHHHHhhCCCCCCchhh-------------------HHHhhhhhhHhhhc-
Q 014478 145 STNLAFTPPEYMRT-GRVTPESVVYSFGTMLLDLLSGKHIPPSHAL-------------------DLIRSKNFLLLMDS- 203 (424)
Q Consensus 145 ~gt~~y~aPE~~~~-~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~-------------------~~~~~~~~~~~~~~- 203 (424)
..|..|.|||.+.. ..|+...||||.||++.||++|++.|++... ...........+..
T Consensus 188 VaTRWYRAPElll~~~~Yt~aiDiWSvGCI~AEmL~gkplFpG~d~v~Ql~lI~~~lGtP~~e~l~~i~s~~ar~yi~sl 267 (359)
T KOG0660|consen 188 VATRWYRAPELLLNSSEYTKAIDIWSVGCILAEMLTGKPLFPGKDYVHQLQLILELLGTPSEEDLQKIRSEKARPYIKSL 267 (359)
T ss_pred eeeeeecCHHHHhccccccchhhhhhhhHHHHHHHcCCCCCCCCchHHHHHHHHHhcCCCCHHHHHHhccHHHHHHHHhC
Confidence 66999999998764 5699999999999999999999999987510 00111111111111
Q ss_pred --ccCCCC---CchhHHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 014478 204 --ALEGHF---SNDEGTELVRLASRCLQSEARERPNAKSLVIS 241 (424)
Q Consensus 204 --~~~~~~---~~~~~~~l~~li~~cl~~dp~~Rps~~~~~~~ 241 (424)
....++ -+..++...+|+++||..||.+|+|++|.++|
T Consensus 268 p~~p~~~f~~~fp~a~p~AidLlekmL~fdP~kRita~eAL~h 310 (359)
T KOG0660|consen 268 PQIPKQPFSSIFPNANPLAIDLLEKMLVFDPKKRITAEEALAH 310 (359)
T ss_pred CCCCCCCHHHHcCCCCHHHHHHHHHHhccCccccCCHHHHhcC
Confidence 111111 12467889999999999999999999999976
|
|
| >cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.8e-40 Score=309.11 Aligned_cols=231 Identities=16% Similarity=0.244 Sum_probs=190.5
Q ss_pred CCCcccceeeee--cceecccccCCC----chhhhHHHHHHHHHhcC-CCcCcceeEEEEEeCCeeeEEEecCCCCCHHh
Q 014478 2 GGRCSKFSICWF--HCHLKSSVLESS----DLGETLNLEEAKAVGNL-RSERLANLIGCCYEADERLLVAEFMPNETLAK 74 (424)
Q Consensus 2 G~~g~v~~~~~~--~~~v~~~~~~~~----~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~ 74 (424)
|+||.||.+.+. +..+++|++... ......+..|.+++..+ +||||+++++++...+..++||||++||+|..
T Consensus 6 G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~ 85 (318)
T cd05570 6 GSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQTKDRLFFVMEYVNGGDLMF 85 (318)
T ss_pred CCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCCCCHHH
Confidence 899999999883 456777777543 23355677899999888 79999999999999999999999999999999
Q ss_pred HhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCC----CCccccCccC
Q 014478 75 HLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRD----GKSYSTNLAF 150 (424)
Q Consensus 75 ~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~----~~~~~gt~~y 150 (424)
++.. ...+++.++..++.|++.||.|||+++ ++||||||+||+++.++.+||+|||+++.... .....||..|
T Consensus 86 ~~~~--~~~l~~~~~~~~~~qi~~~l~~LH~~~-ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~g~~~y 162 (318)
T cd05570 86 HIQR--SGRFDEPRARFYAAEIVLGLQFLHERG-IIYRDLKLDNVLLDSEGHIKIADFGMCKEGILGGVTTSTFCGTPDY 162 (318)
T ss_pred HHHH--cCCCCHHHHHHHHHHHHHHHHHHHhCC-eEccCCCHHHeEECCCCcEEecccCCCeecCcCCCcccceecCccc
Confidence 8864 457999999999999999999999999 99999999999999999999999999875322 1234689999
Q ss_pred CCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHHHHHHHHHhcccCcC
Q 014478 151 TPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEAR 230 (424)
Q Consensus 151 ~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~ 230 (424)
+|||++.+..++.++|||||||++|+|++|..||......... ...... ....+..++.++.++|.+||..||.
T Consensus 163 ~aPE~~~~~~~~~~~DiwslGvil~~l~~G~~pf~~~~~~~~~----~~i~~~--~~~~~~~~~~~~~~li~~~l~~dP~ 236 (318)
T cd05570 163 IAPEILSYQPYGPAVDWWALGVLLYEMLAGQSPFEGDDEDELF----QSILED--EVRYPRWLSKEAKSILKSFLTKNPE 236 (318)
T ss_pred cCHHHhcCCCCCcchhhhhHHHHHHHHhhCCCCCCCCCHHHHH----HHHHcC--CCCCCCcCCHHHHHHHHHHccCCHH
Confidence 9999999889999999999999999999999888654222111 111111 1234556788999999999999999
Q ss_pred CCCCH-----HHHHHH
Q 014478 231 ERPNA-----KSLVIS 241 (424)
Q Consensus 231 ~Rps~-----~~~~~~ 241 (424)
+|||+ .+++.+
T Consensus 237 ~R~s~~~~~~~~ll~~ 252 (318)
T cd05570 237 KRLGCLPTGEQDIKGH 252 (318)
T ss_pred HcCCCCCCCHHHHhcC
Confidence 99999 887765
|
Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re |
| >cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-39 Score=296.01 Aligned_cols=235 Identities=21% Similarity=0.301 Sum_probs=192.0
Q ss_pred CCCcccceeeeec-----ceecccccCCCch--hhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHh
Q 014478 2 GGRCSKFSICWFH-----CHLKSSVLESSDL--GETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAK 74 (424)
Q Consensus 2 G~~g~v~~~~~~~-----~~v~~~~~~~~~~--~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~ 74 (424)
|++|.||++.+.. ..+++|.+..... ..+.+.+|+++++.+.||||+++++++.. ...++||||+++|+|.+
T Consensus 6 G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~~v~e~~~~~~L~~ 84 (257)
T cd05060 6 GNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQLDHPCIVRLIGVCKG-EPLMLVMELAPLGPLLK 84 (257)
T ss_pred cCceeEEEeEeeccCCCcceEEEEecccccchHHHHHHHHHHHHHHhcCCCCeeeEEEEEcC-CceEEEEEeCCCCcHHH
Confidence 8999999998843 3467677655443 45688999999999999999999998764 56799999999999999
Q ss_pred HhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCCCc-------cccC
Q 014478 75 HLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKS-------YSTN 147 (424)
Q Consensus 75 ~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~~~-------~~gt 147 (424)
++.. ...+++..+..++.|++.||.|||+.+ ++||||||+||+++.++.+||+|||+++....... ..++
T Consensus 85 ~l~~--~~~~~~~~~~~~~~qi~~~l~~lh~~~-i~H~di~p~nili~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~ 161 (257)
T cd05060 85 YLKK--RREIPVSDLKELAHQVAMGMAYLESKH-FVHRDLAARNVLLVNRHQAKISDFGMSRALGAGSDYYRATTAGRWP 161 (257)
T ss_pred HHHh--CCCCCHHHHHHHHHHHHHHHHHHhhcC-eeccCcccceEEEcCCCcEEeccccccceeecCCcccccccCcccc
Confidence 9975 347899999999999999999999999 99999999999999999999999999876543321 1224
Q ss_pred ccCCCccccccCCCCCCcceehhHHHHHHHhh-CCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHHHHHHHHHhcc
Q 014478 148 LAFTPPEYMRTGRVTPESVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQ 226 (424)
Q Consensus 148 ~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~ 226 (424)
..|+|||++.+..++.++|||||||++|+|++ |..||.... .......+........+..++..+.+++.+||.
T Consensus 162 ~~y~aPE~~~~~~~~~~~Di~slG~~l~~~~~~g~~p~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~ 236 (257)
T cd05060 162 LKWYAPECINYGKFSSKSDVWSYGVTLWEAFSYGAKPYGEMK-----GAEVIAMLESGERLPRPEECPQEIYSIMLSCWK 236 (257)
T ss_pred ccccCHHHhcCCCCCccchHHHHHHHHHHHHcCCCCCcccCC-----HHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHhc
Confidence 67999999998889999999999999999998 887665421 112222222223334556678899999999999
Q ss_pred cCcCCCCCHHHHHHHHHHH
Q 014478 227 SEARERPNAKSLVISLMSL 245 (424)
Q Consensus 227 ~dp~~Rps~~~~~~~l~~~ 245 (424)
.+|++|||+.++++.|+..
T Consensus 237 ~~p~~Rp~~~~l~~~l~~~ 255 (257)
T cd05060 237 YRPEDRPTFSELESTFRRD 255 (257)
T ss_pred CChhhCcCHHHHHHHHHhc
Confidence 9999999999999998764
|
Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi |
| >cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-39 Score=301.24 Aligned_cols=241 Identities=18% Similarity=0.223 Sum_probs=192.5
Q ss_pred CCCcccceeeeecc----eecccccCC--CchhhhHHHHHHHHHhcC-CCcCcceeEEEEEeCCeeeEEEecCCCCCHHh
Q 014478 2 GGRCSKFSICWFHC----HLKSSVLES--SDLGETLNLEEAKAVGNL-RSERLANLIGCCYEADERLLVAEFMPNETLAK 74 (424)
Q Consensus 2 G~~g~v~~~~~~~~----~v~~~~~~~--~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~ 74 (424)
||+|.||.+.+... .++++.+.. .....+.|.+|+.++.++ +||||+++++++......+++|||+++|+|.+
T Consensus 13 g~~g~v~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~ 92 (297)
T cd05089 13 GNFGQVIRAMIKKDGLKMNAAIKMLKEFASENDHRDFAGELEVLCKLGHHPNIINLLGACENRGYLYIAIEYAPYGNLLD 92 (297)
T ss_pred CCcceEEEEEecCCCCcceeEEEEccccCCHHHHHHHHHHHHHHHhhcCCCchhheEEEEccCCcceEEEEecCCCcHHH
Confidence 89999999987332 234444442 233456789999999999 79999999999999888999999999999999
Q ss_pred HhccCC--------------CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCC
Q 014478 75 HLFHWE--------------TQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRD 140 (424)
Q Consensus 75 ~l~~~~--------------~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~ 140 (424)
++.... ...+++.+++.++.|++.||+|||+++ ++||||||+|||++.++.+||+|||++.....
T Consensus 93 ~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~~-ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~ 171 (297)
T cd05089 93 FLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSEKQ-FIHRDLAARNVLVGENLASKIADFGLSRGEEV 171 (297)
T ss_pred HHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHHCC-cccCcCCcceEEECCCCeEEECCcCCCccccc
Confidence 985421 135889999999999999999999999 99999999999999999999999999865332
Q ss_pred C---CccccCccCCCccccccCCCCCCcceehhHHHHHHHhh-CCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHH
Q 014478 141 G---KSYSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTE 216 (424)
Q Consensus 141 ~---~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (424)
. .....+..|+|||++.+..++.++|||||||++|||++ |..||....... .............+..++.+
T Consensus 172 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t~g~~pf~~~~~~~-----~~~~~~~~~~~~~~~~~~~~ 246 (297)
T cd05089 172 YVKKTMGRLPVRWMAIESLNYSVYTTKSDVWSFGVLLWEIVSLGGTPYCGMTCAE-----LYEKLPQGYRMEKPRNCDDE 246 (297)
T ss_pred eeccCCCCcCccccCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHHH-----HHHHHhcCCCCCCCCCCCHH
Confidence 1 11223457999999988889999999999999999997 887776532211 11112222233345567889
Q ss_pred HHHHHHHhcccCcCCCCCHHHHHHHHHHHhhh
Q 014478 217 LVRLASRCLQSEARERPNAKSLVISLMSLQKE 248 (424)
Q Consensus 217 l~~li~~cl~~dp~~Rps~~~~~~~l~~~~~~ 248 (424)
+.+++.+||..+|.+|||++++++.|..+...
T Consensus 247 ~~~li~~~l~~~p~~Rp~~~~i~~~l~~~~~~ 278 (297)
T cd05089 247 VYELMRQCWRDRPYERPPFAQISVQLSRMLEA 278 (297)
T ss_pred HHHHHHHHcCCChhhCcCHHHHHHHHHHHHHh
Confidence 99999999999999999999999999887764
|
Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations. |
| >cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-39 Score=297.37 Aligned_cols=239 Identities=18% Similarity=0.222 Sum_probs=190.4
Q ss_pred CCCcccceeeeecc----eecccccCC--CchhhhHHHHHHHHHhcC-CCcCcceeEEEEEeCCeeeEEEecCCCCCHHh
Q 014478 2 GGRCSKFSICWFHC----HLKSSVLES--SDLGETLNLEEAKAVGNL-RSERLANLIGCCYEADERLLVAEFMPNETLAK 74 (424)
Q Consensus 2 G~~g~v~~~~~~~~----~v~~~~~~~--~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~ 74 (424)
||+|.||.+.+... .++++.+.. .......+.+|++++.++ +||||++++++|...+..+++|||+++|+|.+
T Consensus 6 g~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~ 85 (270)
T cd05047 6 GNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLD 85 (270)
T ss_pred CCCceEEEEEEcCCCCeeEEEEEEccccCCHHHHHHHHHHHHHHHhhccCCCeeeEEEEEecCCCceEEEEeCCCCcHHH
Confidence 89999999987432 245555543 233456788999999999 89999999999999999999999999999999
Q ss_pred HhccCC--------------CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCC
Q 014478 75 HLFHWE--------------TQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRD 140 (424)
Q Consensus 75 ~l~~~~--------------~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~ 140 (424)
++.... ...+++.+++.++.|++.||+|||+++ ++||||||+||+++.++.+||+|||++.....
T Consensus 86 ~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~~~-i~H~dikp~nili~~~~~~kl~dfgl~~~~~~ 164 (270)
T cd05047 86 FLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQ-FIHRDLAARNILVGENYVAKIADFGLSRGQEV 164 (270)
T ss_pred HHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHHCC-EeecccccceEEEcCCCeEEECCCCCccccch
Confidence 986421 135789999999999999999999999 99999999999999999999999999864332
Q ss_pred C---CccccCccCCCccccccCCCCCCcceehhHHHHHHHhh-CCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHH
Q 014478 141 G---KSYSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTE 216 (424)
Q Consensus 141 ~---~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (424)
. .....+..|+|||++.+..++.++|||||||++|||++ |..||...... ..............+..++.+
T Consensus 165 ~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~-----~~~~~~~~~~~~~~~~~~~~~ 239 (270)
T cd05047 165 YVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCA-----ELYEKLPQGYRLEKPLNCDDE 239 (270)
T ss_pred hhhccCCCCccccCChHHHccCCCCchhhHHHHHHHHHHHHcCCCCCccccCHH-----HHHHHHhCCCCCCCCCcCCHH
Confidence 1 12233567999999988889999999999999999997 88777543211 111112222222344456788
Q ss_pred HHHHHHHhcccCcCCCCCHHHHHHHHHHHh
Q 014478 217 LVRLASRCLQSEARERPNAKSLVISLMSLQ 246 (424)
Q Consensus 217 l~~li~~cl~~dp~~Rps~~~~~~~l~~~~ 246 (424)
+.+++.+||..||.+|||+.+++..|..+.
T Consensus 240 ~~~li~~~l~~~p~~Rps~~~il~~l~~~~ 269 (270)
T cd05047 240 VYDLMRQCWREKPYERPSFAQILVSLNRML 269 (270)
T ss_pred HHHHHHHHcccChhhCCCHHHHHHHHHHhh
Confidence 999999999999999999999999998764
|
Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l |
| >KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-40 Score=294.83 Aligned_cols=233 Identities=14% Similarity=0.173 Sum_probs=195.8
Q ss_pred CCCcccceeee--ecceecccccCCCc----hhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHhH
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESSD----LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKH 75 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~~----~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~ 75 (424)
|.+|.|-.+.. .+..|++|.+.++. .+.-.+.+|+++|..|+||||+.+|.+|+..+.+.|||||..+|.|.+|
T Consensus 64 GTYGKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNHPhII~IyEVFENkdKIvivMEYaS~GeLYDY 143 (668)
T KOG0611|consen 64 GTYGKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNHPHIIQIYEVFENKDKIVIVMEYASGGELYDY 143 (668)
T ss_pred CcccceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcCCCceeehhhhhcCCceEEEEEEecCCccHHHH
Confidence 55666666654 57778888776544 3455778999999999999999999999999999999999999999999
Q ss_pred hccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCC---CccccCccCCC
Q 014478 76 LFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG---KSYSTNLAFTP 152 (424)
Q Consensus 76 l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~---~~~~gt~~y~a 152 (424)
+.. .+.+++.++..+++||.+|+.|+|.++ ++|||||.+|||+|.|+++||+|||++...... .+++|++.|.+
T Consensus 144 iSe--r~~LsErEaRhfFRQIvSAVhYCHknr-VvHRDLKLENILLD~N~NiKIADFGLSNly~~~kfLqTFCGSPLYAS 220 (668)
T KOG0611|consen 144 ISE--RGSLSEREARHFFRQIVSAVHYCHKNR-VVHRDLKLENILLDQNNNIKIADFGLSNLYADKKFLQTFCGSPLYAS 220 (668)
T ss_pred HHH--hccccHHHHHHHHHHHHHHHHHHhhcc-ceecccchhheeecCCCCeeeeccchhhhhccccHHHHhcCCcccCC
Confidence 975 678999999999999999999999999 999999999999999999999999998876654 57899999999
Q ss_pred ccccccCCC-CCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHHHHHHHHHhcccCcCC
Q 014478 153 PEYMRTGRV-TPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARE 231 (424)
Q Consensus 153 PE~~~~~~~-~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~ 231 (424)
||.+++.+| .+..|.||||++||.|+.|.-||.+..... .+.++....++.+ .-|....-||++||-.||++
T Consensus 221 PEIvNG~PY~GPEVDsWsLGvLLYtLVyGtMPFDG~Dhk~----lvrQIs~GaYrEP---~~PSdA~gLIRwmLmVNP~R 293 (668)
T KOG0611|consen 221 PEIVNGTPYKGPEVDSWSLGVLLYTLVYGTMPFDGRDHKR----LVRQISRGAYREP---ETPSDASGLIRWMLMVNPER 293 (668)
T ss_pred ccccCCCCCCCCccchhhHHHHHHHHhhcccccCCchHHH----HHHHhhcccccCC---CCCchHHHHHHHHHhcCccc
Confidence 999999887 678999999999999999998888752221 1222222233222 22557889999999999999
Q ss_pred CCCHHHHHHHHHH
Q 014478 232 RPNAKSLVISLMS 244 (424)
Q Consensus 232 Rps~~~~~~~l~~ 244 (424)
|.|+.+|..+-+-
T Consensus 294 RATieDiAsHWWv 306 (668)
T KOG0611|consen 294 RATIEDIASHWWV 306 (668)
T ss_pred chhHHHHhhhhee
Confidence 9999999988653
|
|
| >cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-39 Score=303.15 Aligned_cols=241 Identities=19% Similarity=0.297 Sum_probs=195.1
Q ss_pred CCCcccceeeeec---------ceecccccCCC--chhhhHHHHHHHHHhcC-CCcCcceeEEEEEeCCeeeEEEecCCC
Q 014478 2 GGRCSKFSICWFH---------CHLKSSVLESS--DLGETLNLEEAKAVGNL-RSERLANLIGCCYEADERLLVAEFMPN 69 (424)
Q Consensus 2 G~~g~v~~~~~~~---------~~v~~~~~~~~--~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~~~~ 69 (424)
|+||.||.+.+.+ ..+++|.+... ......+.+|+.+++.+ +||||++++++|...+..++||||+++
T Consensus 29 G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e~~~~ 108 (307)
T cd05098 29 GCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASK 108 (307)
T ss_pred CCCeeEEEeEEeccCCcccCccceEEEEeccCCCChHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCceEEEEecCCC
Confidence 8899999887643 24666666543 23456788899999999 799999999999999999999999999
Q ss_pred CCHHhHhccCC--------------CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEcccccc
Q 014478 70 ETLAKHLFHWE--------------TQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLM 135 (424)
Q Consensus 70 gsL~~~l~~~~--------------~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~ 135 (424)
|+|.+++.... ...+++.++++++.|++.||.|||+++ ++||||||+||+++.++.+||+|||++
T Consensus 109 ~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~g-i~H~dlkp~Nill~~~~~~kL~dfg~a 187 (307)
T cd05098 109 GNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLASKK-CIHRDLAARNVLVTEDNVMKIADFGLA 187 (307)
T ss_pred CcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCC-cccccccHHheEEcCCCcEEECCCccc
Confidence 99999996421 135889999999999999999999999 999999999999999999999999998
Q ss_pred ccCCCCC------ccccCccCCCccccccCCCCCCcceehhHHHHHHHhh-CCCCCCchhhHHHhhhhhhHhhhcccCCC
Q 014478 136 KNSRDGK------SYSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKNFLLLMDSALEGH 208 (424)
Q Consensus 136 ~~~~~~~------~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (424)
+...... ...+++.|+|||++.+..++.++|||||||++|+|++ |..|+...... .............
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~~g~~p~~~~~~~-----~~~~~~~~~~~~~ 262 (307)
T cd05098 188 RDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVE-----ELFKLLKEGHRMD 262 (307)
T ss_pred ccccccchhhccccCCCccceeChHHhccCCCCcHHHHHHHHHHHHHHHcCCCCCCCcCCHH-----HHHHHHHcCCCCC
Confidence 7654321 1223468999999998889999999999999999998 77666543211 1222222233334
Q ss_pred CCchhHHHHHHHHHHhcccCcCCCCCHHHHHHHHHHHhhh
Q 014478 209 FSNDEGTELVRLASRCLQSEARERPNAKSLVISLMSLQKE 248 (424)
Q Consensus 209 ~~~~~~~~l~~li~~cl~~dp~~Rps~~~~~~~l~~~~~~ 248 (424)
.+..++.++.+++.+||..+|++|||+.++++.|..+...
T Consensus 263 ~~~~~~~~~~~li~~~l~~~p~~Rps~~evl~~l~~~~~~ 302 (307)
T cd05098 263 KPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILAL 302 (307)
T ss_pred CCCcCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHHHH
Confidence 5566788999999999999999999999999999988764
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.7e-41 Score=280.78 Aligned_cols=236 Identities=17% Similarity=0.199 Sum_probs=190.3
Q ss_pred CCCcccceeee--ecceecccccCC---CchhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHhHh
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLES---SDLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHL 76 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~---~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~l 76 (424)
|.|+.|++... .+...+++++.- +..+.+.+.+|+++.+.|+||||+++.+........|||+|+++|++|..-|
T Consensus 22 G~FSvVrRc~~~~tg~~fa~kiin~~k~~~~~~e~l~rEarIC~~LqHP~IvrL~~ti~~~~~~ylvFe~m~G~dl~~eI 101 (355)
T KOG0033|consen 22 GAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDI 101 (355)
T ss_pred CchHHHHHHHhccchHHHHHHHhhhhhhccccHHHHHHHHHHHHhcCCCcEeehhhhhcccceeEEEEecccchHHHHHH
Confidence 67777777665 555555554421 2235677889999999999999999999999999999999999999998766
Q ss_pred ccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecC---CCCeEEccccccccCCCCC---ccccCccC
Q 014478 77 FHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDK---DGNPRLSSFGLMKNSRDGK---SYSTNLAF 150 (424)
Q Consensus 77 ~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~---~~~~kl~Dfg~~~~~~~~~---~~~gt~~y 150 (424)
.. +..+++..+-..++||+++|.|+|.++ |||||+||+|+++.. .--+||+|||++.....+. ...||+.|
T Consensus 102 V~--R~~ySEa~aSH~~rQiLeal~yCH~n~-IvHRDvkP~nllLASK~~~A~vKL~~FGvAi~l~~g~~~~G~~GtP~f 178 (355)
T KOG0033|consen 102 VA--REFYSEADASHCIQQILEALAYCHSNG-IVHRDLKPENLLLASKAKGAAVKLADFGLAIEVNDGEAWHGFAGTPGY 178 (355)
T ss_pred HH--HHHHHHHHHHHHHHHHHHHHHHHHhcC-ceeccCChhheeeeeccCCCceeecccceEEEeCCccccccccCCCcc
Confidence 53 346788888999999999999999999 999999999999943 2358999999999887554 34689999
Q ss_pred CCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhc--ccCCCCCchhHHHHHHHHHHhcccC
Q 014478 151 TPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDS--ALEGHFSNDEGTELVRLASRCLQSE 228 (424)
Q Consensus 151 ~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~li~~cl~~d 228 (424)
||||++...+|+..+|||+.|++||-|+.|..||.+...... +..+... ...++.-..++++.++|+++||..|
T Consensus 179 maPEvvrkdpy~kpvDiW~cGViLfiLL~G~~PF~~~~~~rl----ye~I~~g~yd~~~~~w~~is~~Ak~LvrrML~~d 254 (355)
T KOG0033|consen 179 LSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRL----YEQIKAGAYDYPSPEWDTVTPEAKSLIRRMLTVN 254 (355)
T ss_pred cCHHHhhcCCCCCcchhhhhhHHHHHHHhCCCCCCCccHHHH----HHHHhccccCCCCcccCcCCHHHHHHHHHHhccC
Confidence 999999999999999999999999999999999887422211 2222222 2233233457889999999999999
Q ss_pred cCCCCCHHHHHHHHHH
Q 014478 229 ARERPNAKSLVISLMS 244 (424)
Q Consensus 229 p~~Rps~~~~~~~l~~ 244 (424)
|++|.|+.|.+++-+-
T Consensus 255 P~kRIta~EAL~HpWi 270 (355)
T KOG0033|consen 255 PKKRITADEALKHPWI 270 (355)
T ss_pred hhhhccHHHHhCCchh
Confidence 9999999999987553
|
|
| >cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.4e-40 Score=313.73 Aligned_cols=233 Identities=17% Similarity=0.186 Sum_probs=189.7
Q ss_pred CCCcccceeee--ecceecccccCCCc----hhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHhH
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESSD----LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKH 75 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~~----~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~ 75 (424)
|++|.||.+.. .+..+++|++.... .....+.+|+.+++.++||||+++++++.+++..++||||++||+|.++
T Consensus 54 G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h~~iv~~~~~~~~~~~~~lv~Ey~~gg~L~~~ 133 (370)
T cd05596 54 GAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEWIVQLHYAFQDDKYLYMVMEYMPGGDLVNL 133 (370)
T ss_pred CCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEEEEEEcCCCCCcHHHH
Confidence 89999998877 46677877775322 2345677899999999999999999999999999999999999999999
Q ss_pred hccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCC-----CccccCccC
Q 014478 76 LFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG-----KSYSTNLAF 150 (424)
Q Consensus 76 l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~-----~~~~gt~~y 150 (424)
+.. ..+++.++..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++..... ....||+.|
T Consensus 134 l~~---~~l~~~~~~~~~~qi~~aL~~LH~~~-ivHrDLkp~NILl~~~~~~kL~DfG~~~~~~~~~~~~~~~~~gt~~y 209 (370)
T cd05596 134 MSN---YDIPEKWARFYTAEVVLALDAIHSMG-FIHRDVKPDNMLLDKSGHLKLADFGTCMKMDANGMVRCDTAVGTPDY 209 (370)
T ss_pred HHh---cCCCHHHHHHHHHHHHHHHHHHHHCC-eeccCCCHHHEEEcCCCCEEEEeccceeeccCCCcccCCCCCCCcCe
Confidence 853 46889999999999999999999999 999999999999999999999999998765432 234689999
Q ss_pred CCccccccC----CCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhcccCCCCCc--hhHHHHHHHHHHh
Q 014478 151 TPPEYMRTG----RVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSN--DEGTELVRLASRC 224 (424)
Q Consensus 151 ~aPE~~~~~----~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~l~~li~~c 224 (424)
+|||++.+. .++.++|||||||++|||++|..||...... .....+........++. .++.++.++|.+|
T Consensus 210 ~aPE~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~----~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~ 285 (370)
T cd05596 210 ISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLV----GTYSKIMDHKNSLTFPDDIEISKQAKDLICAF 285 (370)
T ss_pred ECHHHhccCCCCCCCCCceeeeehhHHHHHHHhCCCCcCCCCHH----HHHHHHHcCCCcCCCCCcCCCCHHHHHHHHHH
Confidence 999998643 3788999999999999999999888764221 11122222111112222 4688999999999
Q ss_pred cccCcCC--CCCHHHHHHHH
Q 014478 225 LQSEARE--RPNAKSLVISL 242 (424)
Q Consensus 225 l~~dp~~--Rps~~~~~~~l 242 (424)
|..+|.+ |+|+.+++.+-
T Consensus 286 L~~~p~r~~R~s~~ell~h~ 305 (370)
T cd05596 286 LTDREVRLGRNGVDEIKSHP 305 (370)
T ss_pred ccChhhccCCCCHHHHhcCc
Confidence 9999988 99999998763
|
Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in |
| >cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-39 Score=304.24 Aligned_cols=237 Identities=15% Similarity=0.171 Sum_probs=183.8
Q ss_pred CCCcccceeee--ecceecccccCCCc--hhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHhHhc
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESSD--LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLF 77 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~~--~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~ 77 (424)
|++|.||.+.+ .+..+++|++.... .....+.+|+.+++.++||||+++++++..+...++||||+. ++|.+++.
T Consensus 16 G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~-~~l~~~~~ 94 (303)
T cd07869 16 GSYATVYKGKSKVNGKLVALKVIRLQEEEGTPFTAIREASLLKGLKHANIVLLHDIIHTKETLTLVFEYVH-TDLCQYMD 94 (303)
T ss_pred cCCEEEEEEEECCCCCEEEEEEeccccccccchhHHHHHHHHhhCCCCCcCeEEEEEecCCeEEEEEECCC-cCHHHHHH
Confidence 89999999987 46677888775433 223467889999999999999999999999999999999996 58888875
Q ss_pred cCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCC----CccccCccCCCc
Q 014478 78 HWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG----KSYSTNLAFTPP 153 (424)
Q Consensus 78 ~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~----~~~~gt~~y~aP 153 (424)
. ....+++..+..++.|++.||.|||+++ |+||||||+|||++.++.+||+|||+++..... ....+|+.|+||
T Consensus 95 ~-~~~~~~~~~~~~~~~qi~~al~~lH~~~-ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aP 172 (303)
T cd07869 95 K-HPGGLHPENVKLFLFQLLRGLSYIHQRY-ILHRDLKPQNLLISDTGELKLADFGLARAKSVPSHTYSNEVVTLWYRPP 172 (303)
T ss_pred h-CCCCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCCHHHEEECCCCCEEECCCCcceeccCCCccCCCCcccCCCCCh
Confidence 4 3456899999999999999999999999 999999999999999999999999998754321 234578999999
Q ss_pred cccccC-CCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhc------------------ccCCCCCc---
Q 014478 154 EYMRTG-RVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDS------------------ALEGHFSN--- 211 (424)
Q Consensus 154 E~~~~~-~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~------------------~~~~~~~~--- 211 (424)
|++.+. .++.++|||||||++|+|++|..||................... ......+.
T Consensus 173 E~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (303)
T cd07869 173 DVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFPGMKDIQDQLERIFLVLGTPNEDTWPGVHSLPHFKPERFTLYSPKNLR 252 (303)
T ss_pred HHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHHhCCCChhhccchhhccccccccccccCCccHH
Confidence 998754 57889999999999999999998887531110000000000000 00000010
Q ss_pred ------hhHHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 014478 212 ------DEGTELVRLASRCLQSEARERPNAKSLVIS 241 (424)
Q Consensus 212 ------~~~~~l~~li~~cl~~dp~~Rps~~~~~~~ 241 (424)
..+.++.+++.+||+.||++|||+.+++++
T Consensus 253 ~~~~~~~~~~~~~dli~~mL~~dp~~R~s~~~~l~h 288 (303)
T cd07869 253 QAWNKLSYVNHAEDLASKLLQCFPKNRLSAQAALSH 288 (303)
T ss_pred HHhhccCCChHHHHHHHHHhccCchhccCHHHHhcC
Confidence 124578899999999999999999999864
|
Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an |
| >cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-39 Score=310.90 Aligned_cols=233 Identities=15% Similarity=0.115 Sum_probs=186.1
Q ss_pred CCCcccceeee--ecceecccccCCCc----hhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHhH
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESSD----LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKH 75 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~~----~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~ 75 (424)
|++|.||.+.. .+..+++|++.... .....+.+|+.++..++||||+++++.+.+....++||||++||+|.++
T Consensus 12 G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~~~iv~~~~~~~~~~~~~lv~E~~~gg~L~~~ 91 (363)
T cd05628 12 GAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMFYSFQDKLNLYLIMEFLPGGDMMTL 91 (363)
T ss_pred CCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCCCCcceEEEEEecCCeEEEEEcCCCCCcHHHH
Confidence 89999999877 46678888775432 2345678899999999999999999999999999999999999999999
Q ss_pred hccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCC--------------
Q 014478 76 LFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG-------------- 141 (424)
Q Consensus 76 l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~-------------- 141 (424)
+.. ...+++.++..++.|++.||.|||+++ |+||||||+|||++.++.+||+|||+++.....
T Consensus 92 l~~--~~~l~~~~~~~~~~qi~~aL~~lH~~g-ivHrDlKp~NILi~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~ 168 (363)
T cd05628 92 LMK--KDTLTEEETQFYIAETVLAIDSIHQLG-FIHRDIKPDNLLLDSKGHVKLSDFGLCTGLKKAHRTEFYRNLNHSLP 168 (363)
T ss_pred HHh--cCCCCHHHHHHHHHHHHHHHHHHHhCC-eEecCCCHHHeEECCCCCEEEeeccCccccccccccccccccccccc
Confidence 964 467999999999999999999999999 999999999999999999999999998753211
Q ss_pred -------------------------CccccCccCCCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhh
Q 014478 142 -------------------------KSYSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKN 196 (424)
Q Consensus 142 -------------------------~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~ 196 (424)
....||+.|+|||++.+..++.++|||||||++|||++|..||....... .
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DvwSlGvil~ell~G~~Pf~~~~~~~----~ 244 (363)
T cd05628 169 SDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPFCSETPQE----T 244 (363)
T ss_pred ccccccccccccccchhhhccccccccccCCccccCHHHHcCCCCCCchhhhhhHHHHHHHHhCCCCCCCCCHHH----H
Confidence 12468999999999998889999999999999999999998887542211 1
Q ss_pred hhHhhh--cccCCCCCchhHHHHHHHHHHhcc--cCcCCCCCHHHHHHH
Q 014478 197 FLLLMD--SALEGHFSNDEGTELVRLASRCLQ--SEARERPNAKSLVIS 241 (424)
Q Consensus 197 ~~~~~~--~~~~~~~~~~~~~~l~~li~~cl~--~dp~~Rps~~~~~~~ 241 (424)
...+.. .....+....+++++.++|.+++. .++..||++++++++
T Consensus 245 ~~~i~~~~~~~~~p~~~~~s~~~~~li~~l~~~~~~r~~r~~~~ei~~h 293 (363)
T cd05628 245 YKKVMNWKETLIFPPEVPISEKAKDLILRFCCEWEHRIGAPGVEEIKTN 293 (363)
T ss_pred HHHHHcCcCcccCCCcCCCCHHHHHHHHHHcCChhhcCCCCCHHHHhCC
Confidence 111111 111111112357789999998664 233346899999876
|
Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus |
| >cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.2e-40 Score=315.21 Aligned_cols=233 Identities=18% Similarity=0.136 Sum_probs=187.2
Q ss_pred CCCcccceeee--ecceecccccCCCc----hhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHhH
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESSD----LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKH 75 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~~----~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~ 75 (424)
|+||.||.+.+ .+..+++|++.... ...+.+.+|++++++++||||+++++++.++...|+||||++||+|.++
T Consensus 12 G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~E~~~gg~L~~~ 91 (377)
T cd05629 12 GAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDSPWVVSLYYSFQDAQYLYLIMEFLPGGDLMTM 91 (377)
T ss_pred cCCEEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCeeEEEEeCCCCCcHHHH
Confidence 89999999877 56677888765432 2345778899999999999999999999999999999999999999999
Q ss_pred hccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCC--------------
Q 014478 76 LFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG-------------- 141 (424)
Q Consensus 76 l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~-------------- 141 (424)
+.. ...+++..+..++.|++.||.|||+++ |+||||||+|||++.++.+||+|||+++.....
T Consensus 92 l~~--~~~~~~~~~~~~~~ql~~aL~~LH~~g-ivHrDlkp~NIll~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~ 168 (377)
T cd05629 92 LIK--YDTFSEDVTRFYMAECVLAIEAVHKLG-FIHRDIKPDNILIDRGGHIKLSDFGLSTGFHKQHDSAYYQKLLQGKS 168 (377)
T ss_pred HHh--cCCCCHHHHHHHHHHHHHHHHHHHhCC-eeccCCCHHHEEECCCCCEEEeecccccccccccccccccccccccc
Confidence 864 457899999999999999999999999 999999999999999999999999998632100
Q ss_pred -------------------------------------CccccCccCCCccccccCCCCCCcceehhHHHHHHHhhCCCCC
Q 014478 142 -------------------------------------KSYSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIP 184 (424)
Q Consensus 142 -------------------------------------~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~ 184 (424)
....||+.|+|||++.+..++.++|||||||++|||++|..||
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf 248 (377)
T cd05629 169 NKNRIDNRNSVAVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFLQQGYGQECDWWSLGAIMFECLIGWPPF 248 (377)
T ss_pred cccccccccccccccccccccchhhhhhhhhcccccccccCCCccccCHHHHccCCCCCceeeEecchhhhhhhcCCCCC
Confidence 0235899999999999888999999999999999999999888
Q ss_pred CchhhHHHhhhhhhHhhhcccCCCCC--chhHHHHHHHHHHhcccCcCCC---CCHHHHHHHH
Q 014478 185 PSHALDLIRSKNFLLLMDSALEGHFS--NDEGTELVRLASRCLQSEARER---PNAKSLVISL 242 (424)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~~li~~cl~~dp~~R---ps~~~~~~~l 242 (424)
....... ....+.........+ ..++.++.++|.+||. +|.+| +|+.+++.+-
T Consensus 249 ~~~~~~~----~~~~i~~~~~~~~~p~~~~~s~~~~dli~~lL~-~~~~r~~r~~~~~~l~hp 306 (377)
T cd05629 249 CSENSHE----TYRKIINWRETLYFPDDIHLSVEAEDLIRRLIT-NAENRLGRGGAHEIKSHP 306 (377)
T ss_pred CCCCHHH----HHHHHHccCCccCCCCCCCCCHHHHHHHHHHhc-CHhhcCCCCCHHHHhcCC
Confidence 6542211 111111111111122 2467889999999997 77765 5999998763
|
Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of |
| >KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.1e-41 Score=317.25 Aligned_cols=235 Identities=16% Similarity=0.245 Sum_probs=195.5
Q ss_pred CCCcccceeeeecceec--cccc-CCCchhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHhHhcc
Q 014478 2 GGRCSKFSICWFHCHLK--SSVL-ESSDLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFH 78 (424)
Q Consensus 2 G~~g~v~~~~~~~~~v~--~~~~-~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~ 78 (424)
|.+|+||.+.+....|. +|-+ ++.....+.+.+|+.+.+.|+|.|||+++|.|.+++.+-|.||-+|||||.+++..
T Consensus 586 GTYG~VYA~RD~~tqvrIaIKEIpekdsr~~QPLhEEIaLH~~LrHkNIVrYLGs~senGf~kIFMEqVPGGSLSsLLrs 665 (1226)
T KOG4279|consen 586 GTYGTVYAARDMDTQVRIAIKEIPEKDSREVQPLHEEIALHSTLRHKNIVRYLGSVSENGFFKIFMEQVPGGSLSSLLRS 665 (1226)
T ss_pred CceeEEEeeccccceeEEEeeecccccchhhccHHHHHHHHHHHhhHhHHHHhhccCCCCeEEEEeecCCCCcHHHHHHh
Confidence 78899999998665554 4433 23334567888999999999999999999999999988899999999999999975
Q ss_pred CCCCCC--CHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeec-CCCCeEEccccccccCC----CCCccccCccCC
Q 014478 79 WETQPM--KWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFD-KDGNPRLSSFGLMKNSR----DGKSYSTNLAFT 151 (424)
Q Consensus 79 ~~~~~l--~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~-~~~~~kl~Dfg~~~~~~----~~~~~~gt~~y~ 151 (424)
. =+++ .+.++--+.+||++||.|||++. |||||||.+|+|++ -.|.+||+|||-++... -..++.||..||
T Consensus 666 k-WGPlKDNEstm~fYtkQILeGLkYLHen~-IVHRDIKGDNVLvNTySGvlKISDFGTsKRLAginP~TETFTGTLQYM 743 (1226)
T KOG4279|consen 666 K-WGPLKDNESTMNFYTKQILEGLKYLHENK-IVHRDIKGDNVLVNTYSGVLKISDFGTSKRLAGINPCTETFTGTLQYM 743 (1226)
T ss_pred c-cCCCccchhHHHHHHHHHHHHhhhhhhcc-eeeccccCCcEEEeeccceEEecccccchhhccCCccccccccchhhh
Confidence 3 3466 67888889999999999999999 99999999999994 67899999999887643 346789999999
Q ss_pred CccccccCC--CCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHHHHHHHHHhcccCc
Q 014478 152 PPEYMRTGR--VTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEA 229 (424)
Q Consensus 152 aPE~~~~~~--~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp 229 (424)
|||++..|+ |+..+|||||||++.||.||++||...... .....+.--....+++|..++.+...||.+|+.+||
T Consensus 744 APEvIDqG~RGYG~aADIWS~GCT~vEMATGrPPF~Elgsp---qAAMFkVGmyKvHP~iPeelsaeak~FilrcFepd~ 820 (1226)
T KOG4279|consen 744 APEVIDQGPRGYGKAADIWSFGCTMVEMATGRPPFVELGSP---QAAMFKVGMYKVHPPIPEELSAEAKNFILRCFEPDP 820 (1226)
T ss_pred ChHhhccCCcCCCchhhhhhccceeEeeccCCCCeeecCCh---hHhhhhhcceecCCCCcHHHHHHHHHHHHHHcCCCc
Confidence 999998764 899999999999999999999888653211 111222222344567888999999999999999999
Q ss_pred CCCCCHHHHHHH
Q 014478 230 RERPNAKSLVIS 241 (424)
Q Consensus 230 ~~Rps~~~~~~~ 241 (424)
.+|||+.+++..
T Consensus 821 ~~R~sA~~LL~D 832 (1226)
T KOG4279|consen 821 CDRPSAKDLLQD 832 (1226)
T ss_pred ccCccHHHhccC
Confidence 999999999874
|
|
| >cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-39 Score=295.42 Aligned_cols=234 Identities=18% Similarity=0.248 Sum_probs=194.2
Q ss_pred CCCcccceeee--ecceecccccCC---CchhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHhHh
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLES---SDLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHL 76 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~---~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~l 76 (424)
|++|.||.+.+ .+..+++|.+.. .......+.+|+++++.++||||+++++++..++..++||||++|++|.+++
T Consensus 11 g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l 90 (256)
T cd08529 11 GSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSYIIRYYESFLDKGKLNIVMEYAENGDLHKLL 90 (256)
T ss_pred CCCeEEEEEEEcCCCcEEEEEEeehhhCCHHHHHHHHHHHHHHHhcCCCCeehheeeeccCCEEEEEEEeCCCCcHHHHH
Confidence 78999999988 456666666543 2345678889999999999999999999999999999999999999999999
Q ss_pred ccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCCC----ccccCccCCC
Q 014478 77 FHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGK----SYSTNLAFTP 152 (424)
Q Consensus 77 ~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~~----~~~gt~~y~a 152 (424)
.......+++.+++.++.|++.||.|||+++ ++|+||||+||+++.++.++|+|||+++...... ...+++.|+|
T Consensus 91 ~~~~~~~~~~~~~~~i~~~l~~al~~lH~~~-i~h~dl~~~nili~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~a 169 (256)
T cd08529 91 KMQRGRPLPEDQVWRFFIQILLGLAHLHSKK-ILHRDIKSLNLFLDAYDNVKIGDLGVAKLLSDNTNFANTIVGTPYYLS 169 (256)
T ss_pred HHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCCcceEEEeCCCCEEEcccccceeccCccchhhccccCccccC
Confidence 7644568999999999999999999999999 9999999999999999999999999987654332 2357889999
Q ss_pred ccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHHHHHHHHHhcccCcCCC
Q 014478 153 PEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARER 232 (424)
Q Consensus 153 PE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~R 232 (424)
||++.+..++.++|+|||||++|+|++|+.||....... .............+..++.++.+++.+||+.+|++|
T Consensus 170 PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R 244 (256)
T cd08529 170 PELCEDKPYNEKSDVWALGVVLYECCTGKHPFDANNQGA-----LILKIIRGVFPPVSQMYSQQLAQLIDQCLTKDYRQR 244 (256)
T ss_pred HHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHH-----HHHHHHcCCCCCCccccCHHHHHHHHHHccCCcccC
Confidence 999998889999999999999999999998876542111 111111122223344667899999999999999999
Q ss_pred CCHHHHHHH
Q 014478 233 PNAKSLVIS 241 (424)
Q Consensus 233 ps~~~~~~~ 241 (424)
|++.+++.+
T Consensus 245 p~~~~ll~~ 253 (256)
T cd08529 245 PDTFQLLRN 253 (256)
T ss_pred cCHHHHhhC
Confidence 999999854
|
Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc |
| >cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-39 Score=312.46 Aligned_cols=240 Identities=19% Similarity=0.290 Sum_probs=194.0
Q ss_pred CCCcccceeeeec-------ceecccccCCCc--hhhhHHHHHHHHHhcCC-CcCcceeEEEEEeCCeeeEEEecCCCCC
Q 014478 2 GGRCSKFSICWFH-------CHLKSSVLESSD--LGETLNLEEAKAVGNLR-SERLANLIGCCYEADERLLVAEFMPNET 71 (424)
Q Consensus 2 G~~g~v~~~~~~~-------~~v~~~~~~~~~--~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~~lv~e~~~~gs 71 (424)
|+||.||.+.+.+ ..|++|++.... ...+.+.+|+++|.++. ||||++++++|......++||||+++|+
T Consensus 48 G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~~H~niv~~~~~~~~~~~~~iv~E~~~~g~ 127 (401)
T cd05107 48 GAFGRVVEATAHGLSHSQSTMKVAVKMLKSTARSSEKQALMSELKIMSHLGPHLNIVNLLGACTKGGPIYIITEYCRYGD 127 (401)
T ss_pred CCceeEEEEEEcCCCCCCCceEEEEEecCCCCChhHHHHHHHHHHHHHhcCCCCCeEEEEEEEccCCCcEEEEeccCCCc
Confidence 8999999998753 357778776432 23457889999999997 9999999999999989999999999999
Q ss_pred HHhHhccCC-----------------------------------------------------------------------
Q 014478 72 LAKHLFHWE----------------------------------------------------------------------- 80 (424)
Q Consensus 72 L~~~l~~~~----------------------------------------------------------------------- 80 (424)
|.+++....
T Consensus 128 L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (401)
T cd05107 128 LVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSESDGGYMDMSKDESADYVPMQDMKGTVKYADIESS 207 (401)
T ss_pred HHHHHHhccccchhhhcccccccccccccccccccccccchhhhhccCccccccCCccccCccchhcchhhhhhhhhhcc
Confidence 999985421
Q ss_pred -------------------------CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEcccccc
Q 014478 81 -------------------------TQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLM 135 (424)
Q Consensus 81 -------------------------~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~ 135 (424)
...+++..+++++.|++.||.|||+++ ++||||||+|||++.++.+||+|||++
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~-ivHrdlkp~NiLl~~~~~~kL~DfGla 286 (401)
T cd05107 208 NYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFLASKN-CVHRDLAARNVLICEGKLVKICDFGLA 286 (401)
T ss_pred CcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCC-cCcccCCcceEEEeCCCEEEEEecCcc
Confidence 124677888999999999999999999 999999999999999999999999998
Q ss_pred ccCCCC------CccccCccCCCccccccCCCCCCcceehhHHHHHHHhh-CCCCCCchhhHHHhhhhhhHhhhcccCCC
Q 014478 136 KNSRDG------KSYSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKNFLLLMDSALEGH 208 (424)
Q Consensus 136 ~~~~~~------~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (424)
+..... ....++..|+|||++.+..++.++|||||||++|||++ |..|+...... ......+.......
T Consensus 287 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~e~l~~g~~P~~~~~~~----~~~~~~~~~~~~~~ 362 (401)
T cd05107 287 RDIMRDSNYISKGSTFLPLKWMAPESIFNNLYTTLSDVWSFGILLWEIFTLGGTPYPELPMN----EQFYNAIKRGYRMA 362 (401)
T ss_pred eecccccccccCCCcCCCCceeChHHhcCCCCCcHhHHHHHHHHHHHHHHcCCCCCCCCCch----HHHHHHHHcCCCCC
Confidence 764321 12345778999999998889999999999999999998 77776543111 11122222233334
Q ss_pred CCchhHHHHHHHHHHhcccCcCCCCCHHHHHHHHHHHh
Q 014478 209 FSNDEGTELVRLASRCLQSEARERPNAKSLVISLMSLQ 246 (424)
Q Consensus 209 ~~~~~~~~l~~li~~cl~~dp~~Rps~~~~~~~l~~~~ 246 (424)
.+..++.++.+++.+||..+|.+||++++|+..|+.+.
T Consensus 363 ~p~~~~~~l~~li~~cl~~~P~~RPs~~ell~~L~~~~ 400 (401)
T cd05107 363 KPAHASDEIYEIMQKCWEEKFEIRPDFSQLVHLVGDLL 400 (401)
T ss_pred CCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHh
Confidence 55567889999999999999999999999999998764
|
Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D |
| >cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=9e-40 Score=307.98 Aligned_cols=226 Identities=20% Similarity=0.218 Sum_probs=184.0
Q ss_pred CCCcccceeee--ecceecccccCCCc----hhhhHHHHHHH-HHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHh
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESSD----LGETLNLEEAK-AVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAK 74 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~~----~~~~~~~~E~~-~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~ 74 (424)
|++|.||.+.+ .+..+++|++.... .....+..|.. +++.++||||+++++.+..++..++||||+++|+|..
T Consensus 6 G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~g~L~~ 85 (323)
T cd05575 6 GSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTADKLYFVLDYVNGGELFF 85 (323)
T ss_pred CCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCCCCCCCCeeEEEEeCCEEEEEEcCCCCCCHHH
Confidence 89999999988 56778888775432 12334555554 5678899999999999999999999999999999999
Q ss_pred HhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCC----CCccccCccC
Q 014478 75 HLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRD----GKSYSTNLAF 150 (424)
Q Consensus 75 ~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~----~~~~~gt~~y 150 (424)
++.. ...+++..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++.... .....||+.|
T Consensus 86 ~l~~--~~~~~~~~~~~~~~qi~~~l~~lH~~g-ivH~dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y 162 (323)
T cd05575 86 HLQR--ERSFPEPRARFYAAEIASALGYLHSLN-IIYRDLKPENILLDSQGHVVLTDFGLCKEGIEHSKTTSTFCGTPEY 162 (323)
T ss_pred HHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC-eEeCCCCHHHeEECCCCcEEEeccCCCcccccCCCccccccCChhh
Confidence 9864 457899999999999999999999999 99999999999999999999999999875332 2234689999
Q ss_pred CCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHHHHHHHHHhcccCcC
Q 014478 151 TPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEAR 230 (424)
Q Consensus 151 ~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~ 230 (424)
+|||++.+..++.++|||||||++|+|++|..||.......... ..... ....+...+.++.++|.+||+.||.
T Consensus 163 ~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~----~i~~~--~~~~~~~~~~~~~~li~~~l~~~p~ 236 (323)
T cd05575 163 LAPEVLRKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRDTAEMYD----NILNK--PLRLKPNISVSARHLLEGLLQKDRT 236 (323)
T ss_pred cChhhhcCCCCCccccccccchhhhhhhcCCCCCCCCCHHHHHH----HHHcC--CCCCCCCCCHHHHHHHHHHhhcCHH
Confidence 99999998889999999999999999999998887642221111 11111 1223445688999999999999999
Q ss_pred CCCCHH
Q 014478 231 ERPNAK 236 (424)
Q Consensus 231 ~Rps~~ 236 (424)
+||++.
T Consensus 237 ~R~~~~ 242 (323)
T cd05575 237 KRLGAK 242 (323)
T ss_pred hCCCCC
Confidence 999884
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr |
| >cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-39 Score=298.77 Aligned_cols=236 Identities=19% Similarity=0.249 Sum_probs=188.9
Q ss_pred CCCcccceeeee-------cceecccccCC-CchhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHH
Q 014478 2 GGRCSKFSICWF-------HCHLKSSVLES-SDLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLA 73 (424)
Q Consensus 2 G~~g~v~~~~~~-------~~~v~~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~ 73 (424)
||+|.||.+... +..++++.+.. .......|.+|+++++.++|+||+++++++..++..+++|||+++|+|.
T Consensus 16 g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~ 95 (280)
T cd05092 16 GAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTVLQHQHIVRFYGVCTEGRPLLMVFEYMRHGDLN 95 (280)
T ss_pred ccCCeEEEeEEecCCCCCCceEEEEEecCcCCHHHHHHHHHHHHHHhcCCCCCCceEEEEEecCCceEEEEecCCCCCHH
Confidence 899999988642 23455555543 3344678999999999999999999999999998999999999999999
Q ss_pred hHhccCCC-------------CCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCC
Q 014478 74 KHLFHWET-------------QPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRD 140 (424)
Q Consensus 74 ~~l~~~~~-------------~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~ 140 (424)
+++..... ..+++..+..++.|++.||.|||+.+ ++||||||+|||+++++.+||+|||+++....
T Consensus 96 ~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~~-i~H~dlkp~nil~~~~~~~kL~dfg~~~~~~~ 174 (280)
T cd05092 96 RFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLASLH-FVHRDLATRNCLVGQGLVVKIGDFGMSRDIYS 174 (280)
T ss_pred HHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHHCC-eecccccHhhEEEcCCCCEEECCCCceeEcCC
Confidence 99864321 34889999999999999999999999 99999999999999999999999999875432
Q ss_pred C------CccccCccCCCccccccCCCCCCcceehhHHHHHHHhh-CCCCCCchhhHHHhhhhhhHhhhcccCCCCCchh
Q 014478 141 G------KSYSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDE 213 (424)
Q Consensus 141 ~------~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 213 (424)
. ....+++.|+|||++.+..++.++|||||||++|||++ |..||...... ..............+..+
T Consensus 175 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~-----~~~~~~~~~~~~~~~~~~ 249 (280)
T cd05092 175 TDYYRVGGRTMLPIRWMPPESILYRKFTTESDIWSFGVVLWEIFTYGKQPWYQLSNT-----EAIECITQGRELERPRTC 249 (280)
T ss_pred CceeecCCCccccccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCccCCHH-----HHHHHHHcCccCCCCCCC
Confidence 2 12234678999999998889999999999999999998 77666442111 111112222222344567
Q ss_pred HHHHHHHHHHhcccCcCCCCCHHHHHHHHH
Q 014478 214 GTELVRLASRCLQSEARERPNAKSLVISLM 243 (424)
Q Consensus 214 ~~~l~~li~~cl~~dp~~Rps~~~~~~~l~ 243 (424)
++.+.+++.+||+.||++||++.+++..|+
T Consensus 250 ~~~~~~li~~cl~~~P~~Rp~~~~l~~~l~ 279 (280)
T cd05092 250 PPEVYAIMQGCWQREPQQRMVIKDIHSRLQ 279 (280)
T ss_pred CHHHHHHHHHHccCChhhCCCHHHHHHHHh
Confidence 789999999999999999999999998775
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory |
| >cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-39 Score=301.57 Aligned_cols=241 Identities=17% Similarity=0.286 Sum_probs=194.2
Q ss_pred CCCcccceeeeec---------ceecccccCCC--chhhhHHHHHHHHHhcC-CCcCcceeEEEEEeCCeeeEEEecCCC
Q 014478 2 GGRCSKFSICWFH---------CHLKSSVLESS--DLGETLNLEEAKAVGNL-RSERLANLIGCCYEADERLLVAEFMPN 69 (424)
Q Consensus 2 G~~g~v~~~~~~~---------~~v~~~~~~~~--~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~~~~ 69 (424)
||+|.||.+.+.+ ..+++|+.... ......+.+|+.+++.+ +||||+++++++......++||||+++
T Consensus 26 G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e~~~~ 105 (304)
T cd05101 26 GCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASK 105 (304)
T ss_pred cCCceEEEEEEeccCCCCCCcceeEEeeecccccchHHHHHHHHHHHHHHhhccCCCchheeEEEecCCceEEEEecCCC
Confidence 8999999887532 24666666433 23456788999999999 899999999999999999999999999
Q ss_pred CCHHhHhccCC--------------CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEcccccc
Q 014478 70 ETLAKHLFHWE--------------TQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLM 135 (424)
Q Consensus 70 gsL~~~l~~~~--------------~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~ 135 (424)
|+|.+++.... ...+++.++..++.||+.||.|||+++ ++||||||+||+++.++.+||+|||++
T Consensus 106 ~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~g-ivH~dlkp~Nili~~~~~~kl~D~g~~ 184 (304)
T cd05101 106 GNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLASQK-CIHRDLAARNVLVTENNVMKIADFGLA 184 (304)
T ss_pred CcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHHCC-eeecccccceEEEcCCCcEEECCCccc
Confidence 99999986421 235788899999999999999999999 999999999999999999999999998
Q ss_pred ccCCCCC------ccccCccCCCccccccCCCCCCcceehhHHHHHHHhh-CCCCCCchhhHHHhhhhhhHhhhcccCCC
Q 014478 136 KNSRDGK------SYSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKNFLLLMDSALEGH 208 (424)
Q Consensus 136 ~~~~~~~------~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (424)
+...... ...+++.|+|||++.+..++.++||||||+++|+|++ |..|+...... .....+.......
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~-----~~~~~~~~~~~~~ 259 (304)
T cd05101 185 RDVNNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVE-----ELFKLLKEGHRMD 259 (304)
T ss_pred eecccccccccccCCCCCceeeCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHH-----HHHHHHHcCCcCC
Confidence 8654321 2234578999999988889999999999999999998 66666543211 1122222223334
Q ss_pred CCchhHHHHHHHHHHhcccCcCCCCCHHHHHHHHHHHhhh
Q 014478 209 FSNDEGTELVRLASRCLQSEARERPNAKSLVISLMSLQKE 248 (424)
Q Consensus 209 ~~~~~~~~l~~li~~cl~~dp~~Rps~~~~~~~l~~~~~~ 248 (424)
.+..++.++.+++.+||..+|++|||+.++++.|.++...
T Consensus 260 ~~~~~~~~~~~li~~cl~~~p~~Rps~~e~l~~l~~~~~~ 299 (304)
T cd05101 260 KPANCTNELYMMMRDCWHAIPSHRPTFKQLVEDLDRILTL 299 (304)
T ss_pred CCCCCCHHHHHHHHHHcccChhhCCCHHHHHHHHHHHHHh
Confidence 4556788999999999999999999999999999887653
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-39 Score=314.66 Aligned_cols=232 Identities=17% Similarity=0.160 Sum_probs=186.8
Q ss_pred CCCcccceeee--ecceecccccCCCc----hhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHhH
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESSD----LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKH 75 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~~----~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~ 75 (424)
|+||.||.+.. .+..+++|++.... .....+.+|++++++++||||+++++.+.+++..++||||+++|+|.++
T Consensus 12 G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h~~iv~~~~~~~~~~~~~lv~E~~~gg~L~~~ 91 (382)
T cd05625 12 GAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVMDYIPGGDMMSL 91 (382)
T ss_pred CCCEEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCCCcCCeEEEEEEeCCEEEEEEeCCCCCcHHHH
Confidence 89999999987 45667777775432 2345778899999999999999999999999999999999999999999
Q ss_pred hccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCC---------------
Q 014478 76 LFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRD--------------- 140 (424)
Q Consensus 76 l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~--------------- 140 (424)
+.+ ...+++..+..++.||+.||.|||+++ |+||||||+|||++.+|.+||+|||++.....
T Consensus 92 l~~--~~~~~e~~~~~~~~qi~~al~~lH~~~-ivHrDlKp~NILl~~~g~~kL~DFGla~~~~~~~~~~~~~~~~~~~~ 168 (382)
T cd05625 92 LIR--MGIFPEDLARFYIAELTCAVESVHKMG-FIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSKYYQSGDHVRQ 168 (382)
T ss_pred HHh--cCCCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCCHHHEEECCCCCEEEeECCCCcccccccccccccccccccc
Confidence 864 356899999999999999999999999 99999999999999999999999999742210
Q ss_pred ------------------------------------CCccccCccCCCccccccCCCCCCcceehhHHHHHHHhhCCCCC
Q 014478 141 ------------------------------------GKSYSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIP 184 (424)
Q Consensus 141 ------------------------------------~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~ 184 (424)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf 248 (382)
T cd05625 169 DSMDFSNEWGDPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVGQPPF 248 (382)
T ss_pred ccccccccccccccccccccccchhhhhccccccccccccccCcccCCHHHhcCCCCCCeeeEEechHHHHHHHhCCCCC
Confidence 01235899999999999888999999999999999999999888
Q ss_pred CchhhHHHhhhhhhHhhh--cccCCCCCchhHHHHHHHHHHhcccCcCCCCC---HHHHHHH
Q 014478 185 PSHALDLIRSKNFLLLMD--SALEGHFSNDEGTELVRLASRCLQSEARERPN---AKSLVIS 241 (424)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps---~~~~~~~ 241 (424)
........ ...... .....+.....++++.++|.+|+ .+|.+|++ +.+++.|
T Consensus 249 ~~~~~~~~----~~~i~~~~~~~~~p~~~~~s~~~~~li~~l~-~~p~~R~~~~~~~ei~~h 305 (382)
T cd05625 249 LAQTPLET----QMKVINWQTSLHIPPQAKLSPEASDLIIKLC-RGPEDRLGKNGADEIKAH 305 (382)
T ss_pred CCCCHHHH----HHHHHccCCCcCCCCcccCCHHHHHHHHHHc-cCHhHcCCCCCHHHHhcC
Confidence 76421111 111111 11122222356788999999876 59999987 8888765
|
Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an |
| >cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.5e-40 Score=309.84 Aligned_cols=235 Identities=18% Similarity=0.215 Sum_probs=187.8
Q ss_pred CCCcccceeee-----ecceecccccCCC-----chhhhHHHHHHHHHhcC-CCcCcceeEEEEEeCCeeeEEEecCCCC
Q 014478 2 GGRCSKFSICW-----FHCHLKSSVLESS-----DLGETLNLEEAKAVGNL-RSERLANLIGCCYEADERLLVAEFMPNE 70 (424)
Q Consensus 2 G~~g~v~~~~~-----~~~~v~~~~~~~~-----~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~~~~g 70 (424)
|++|.||.+.. .+..+++|++... ....+.+..|+.++..+ +||||+++++++..++..++||||+++|
T Consensus 11 G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~~~~g 90 (332)
T cd05614 11 GAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQTEAKLHLILDYVSGG 90 (332)
T ss_pred cCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEecCCEEEEEEeCCCCC
Confidence 89999998765 3566777776432 22345678899999999 5999999999999999999999999999
Q ss_pred CHHhHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCC-----Cccc
Q 014478 71 TLAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG-----KSYS 145 (424)
Q Consensus 71 sL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~-----~~~~ 145 (424)
+|.+++.. ...+++.++..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++..... ....
T Consensus 91 ~L~~~l~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~-ivHrDlkp~Nili~~~~~~kl~DfG~~~~~~~~~~~~~~~~~ 167 (332)
T cd05614 91 EMFTHLYQ--RDNFSEDEVRFYSGEIILALEHLHKLG-IVYRDIKLENILLDSEGHVVLTDFGLSKEFLSEEKERTYSFC 167 (332)
T ss_pred cHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-cEecCCCHHHeEECCCCCEEEeeCcCCccccccCCCcccccc
Confidence 99999864 457899999999999999999999999 999999999999999999999999998754322 2346
Q ss_pred cCccCCCccccccC-CCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHHHHHHHHHh
Q 014478 146 TNLAFTPPEYMRTG-RVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRC 224 (424)
Q Consensus 146 gt~~y~aPE~~~~~-~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c 224 (424)
||..|+|||++.+. .++.++|||||||++|||++|..||................. ......+..+++.+.+++.+|
T Consensus 168 gt~~y~aPE~~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~li~~~ 245 (332)
T cd05614 168 GTIEYMAPEIIRGKGGHGKAVDWWSLGILIFELLTGASPFTLEGERNTQSEVSRRIL--KCDPPFPSFIGPEAQDLLHKL 245 (332)
T ss_pred CCccccCHHHhcCCCCCCCccccccchhhhhhhhcCCCCCCCCCCCCCHHHHHHHHh--cCCCCCCCCCCHHHHHHHHHH
Confidence 89999999999865 478899999999999999999988754211100000011111 112234556788999999999
Q ss_pred cccCcCCCC-----CHHHHHHH
Q 014478 225 LQSEARERP-----NAKSLVIS 241 (424)
Q Consensus 225 l~~dp~~Rp-----s~~~~~~~ 241 (424)
|..||++|| ++++++++
T Consensus 246 l~~dp~~R~~~~~~~~~~~l~h 267 (332)
T cd05614 246 LRKDPKKRLGAGPQGASEIKEH 267 (332)
T ss_pred cCCCHHHcCCCCCCCHHHHHcC
Confidence 999999999 77888875
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph |
| >cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-39 Score=293.88 Aligned_cols=236 Identities=21% Similarity=0.255 Sum_probs=191.8
Q ss_pred CCCcccceeeeec-----ceecccccCCCch--hhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHh
Q 014478 2 GGRCSKFSICWFH-----CHLKSSVLESSDL--GETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAK 74 (424)
Q Consensus 2 G~~g~v~~~~~~~-----~~v~~~~~~~~~~--~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~ 74 (424)
|++|.||++.|.. ..+++|.+..... ..+.+.+|+.++++++||||+++++++.. ...++||||+++|+|.+
T Consensus 6 g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~~v~e~~~~~~L~~ 84 (257)
T cd05040 6 GSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLSDIMDDFLKEAAIMHSLDHENLIRLYGVVLT-HPLMMVTELAPLGSLLD 84 (257)
T ss_pred cCcccEEeeeEecCCCCceEEEEeecCCcccHHHHHHHHHHHHHHhhcCCCCccceeEEEcC-CeEEEEEEecCCCcHHH
Confidence 8999999999843 2366676655443 46688999999999999999999999988 78899999999999999
Q ss_pred HhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCC-------CccccC
Q 014478 75 HLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG-------KSYSTN 147 (424)
Q Consensus 75 ~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~-------~~~~gt 147 (424)
++.......+++..++.++.|++.||.|||+++ ++||||||+||+++.++.+||+|||+++..... ....++
T Consensus 85 ~l~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~-i~H~di~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~ 163 (257)
T cd05040 85 RLRKDALGHFLISTLCDYAVQIANGMRYLESKR-FIHRDLAARNILLASDDKVKIGDFGLMRALPQNEDHYVMEEHLKVP 163 (257)
T ss_pred HHHhcccccCcHHHHHHHHHHHHHHHHHHHhCC-ccccccCcccEEEecCCEEEeccccccccccccccceecccCCCCC
Confidence 997533357899999999999999999999999 999999999999999999999999998865432 123467
Q ss_pred ccCCCccccccCCCCCCcceehhHHHHHHHhh-CCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHHHHHHHHHhcc
Q 014478 148 LAFTPPEYMRTGRVTPESVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQ 226 (424)
Q Consensus 148 ~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~ 226 (424)
..|+|||++.+..++.++|||||||++|+|++ |..|+........ .............+...+..+.+++.+||.
T Consensus 164 ~~y~~pE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~li~~~l~ 239 (257)
T cd05040 164 FAWCAPESLRTRTFSHASDVWMFGVTLWEMFTYGEEPWAGLSGSQI----LKKIDKEGERLERPEACPQDIYNVMLQCWA 239 (257)
T ss_pred ceecCHHHhcccCcCchhhhHHHHHHHHHHHhCCCCCCCCCCHHHH----HHHHHhcCCcCCCCccCCHHHHHHHHHHCC
Confidence 78999999998889999999999999999998 8877654311111 111111112223344567899999999999
Q ss_pred cCcCCCCCHHHHHHHHH
Q 014478 227 SEARERPNAKSLVISLM 243 (424)
Q Consensus 227 ~dp~~Rps~~~~~~~l~ 243 (424)
.+|++|||+.++++.|.
T Consensus 240 ~~p~~Rps~~~~~~~l~ 256 (257)
T cd05040 240 HNPADRPTFAALREFLP 256 (257)
T ss_pred CCcccCCCHHHHHHHhc
Confidence 99999999999998764
|
Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and |
| >cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-39 Score=294.23 Aligned_cols=239 Identities=18% Similarity=0.227 Sum_probs=187.6
Q ss_pred CCCcccceeeeec-----ceecccccCCC--chhhhHHHHHHHHHhcCCCcCcceeEEEEEe-CCeeeEEEecCCCCCHH
Q 014478 2 GGRCSKFSICWFH-----CHLKSSVLESS--DLGETLNLEEAKAVGNLRSERLANLIGCCYE-ADERLLVAEFMPNETLA 73 (424)
Q Consensus 2 G~~g~v~~~~~~~-----~~v~~~~~~~~--~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-~~~~~lv~e~~~~gsL~ 73 (424)
|++|.||++.+.. ..+++|.+... ....+.+.+|+.+++.++||||+++++++.. ++..++||||+.+|+|.
T Consensus 6 g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~~~~~~L~ 85 (262)
T cd05058 6 GHFGCVYHGTLIDSDGQKIHCAVKSLNRITDLEEVEQFLKEGIIMKDFSHPNVLSLLGICLPSEGSPLVVLPYMKHGDLR 85 (262)
T ss_pred cCCceEEEEEEecCCCceEEEEEEecCccCCHHHHHHHHHHHHHHccCCCCCcceEEEEeecCCCCcEEEEecCCCCCHH
Confidence 8999999998732 34666665432 2345688899999999999999999998764 55678999999999999
Q ss_pred hHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCC--------Cccc
Q 014478 74 KHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG--------KSYS 145 (424)
Q Consensus 74 ~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~--------~~~~ 145 (424)
+++... ....++..+..++.|++.||.|||+.+ ++||||||+|||++.++.+||+|||+++..... ....
T Consensus 86 ~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~-i~H~dlk~~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~ 163 (262)
T cd05058 86 NFIRSE-THNPTVKDLIGFGLQVAKGMEYLASKK-FVHRDLAARNCMLDESFTVKVADFGLARDIYDKEYYSVHNHTGAK 163 (262)
T ss_pred HHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHhCC-ccccccCcceEEEcCCCcEEECCccccccccCCcceeecccccCc
Confidence 998642 345678888999999999999999999 999999999999999999999999998754321 1234
Q ss_pred cCccCCCccccccCCCCCCcceehhHHHHHHHhhCCCC-CCchhhHHHhhhhhhHhhhcccCCCCCchhHHHHHHHHHHh
Q 014478 146 TNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHI-PPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRC 224 (424)
Q Consensus 146 gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c 224 (424)
++..|+|||.+.+..++.++|||||||++|||++|..| +..... ......+........+..++..+.+++.+|
T Consensus 164 ~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~li~~c 238 (262)
T cd05058 164 LPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVDS-----FDITVYLLQGRRLLQPEYCPDPLYEVMLSC 238 (262)
T ss_pred CCccccChhHhccCccchHHHHHHHHHHHHHHHcCCCCCCCCCCH-----HHHHHHHhcCCCCCCCCcCCHHHHHHHHHH
Confidence 56789999999888899999999999999999996544 433211 111111112222233445677899999999
Q ss_pred cccCcCCCCCHHHHHHHHHHHhh
Q 014478 225 LQSEARERPNAKSLVISLMSLQK 247 (424)
Q Consensus 225 l~~dp~~Rps~~~~~~~l~~~~~ 247 (424)
|..+|++||++.+++..|+.+..
T Consensus 239 l~~~p~~Rp~~~~il~~l~~~~~ 261 (262)
T cd05058 239 WHPKPEMRPTFSELVSRIEQIFS 261 (262)
T ss_pred cCCChhhCCCHHHHHHHHHHHhc
Confidence 99999999999999999987653
|
Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca |
| >cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-39 Score=297.37 Aligned_cols=239 Identities=18% Similarity=0.257 Sum_probs=191.7
Q ss_pred CCCcccceeeee--cc----eecccccCC--CchhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHH
Q 014478 2 GGRCSKFSICWF--HC----HLKSSVLES--SDLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLA 73 (424)
Q Consensus 2 G~~g~v~~~~~~--~~----~v~~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~ 73 (424)
|++|.||++.|. +. .+++|++.. .......+.+|+.++..++||||+++++++.. ...+++|||+++|+|.
T Consensus 18 G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~-~~~~l~~~~~~~g~l~ 96 (279)
T cd05109 18 GAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVCRLLGICLT-STVQLVTQLMPYGCLL 96 (279)
T ss_pred CCCceEEEEEEecCCCccceEEEEEEecCCCCHHHHHHHHHHHHHHHhcCCCCCceEEEEEcC-CCcEEEEEcCCCCCHH
Confidence 899999999883 32 245666543 33346678899999999999999999999975 4578999999999999
Q ss_pred hHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCCC------ccccC
Q 014478 74 KHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGK------SYSTN 147 (424)
Q Consensus 74 ~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~~------~~~gt 147 (424)
+++.. ....+++.+++.++.|++.||.|||+++ ++||||||+|||+++++.+||+|||+++...... ...++
T Consensus 97 ~~l~~-~~~~~~~~~~~~~~~qi~~~L~~lH~~~-iiH~dlkp~Nil~~~~~~~kL~dfG~~~~~~~~~~~~~~~~~~~~ 174 (279)
T cd05109 97 DYVRE-NKDRIGSQDLLNWCVQIAKGMSYLEEVR-LVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHADGGKVP 174 (279)
T ss_pred HHHhh-ccCCCCHHHHHHHHHHHHHHHHHHHHCC-eeccccccceEEEcCCCcEEECCCCceeecccccceeecCCCccc
Confidence 99865 2456899999999999999999999999 9999999999999999999999999988654322 12345
Q ss_pred ccCCCccccccCCCCCCcceehhHHHHHHHhh-CCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHHHHHHHHHhcc
Q 014478 148 LAFTPPEYMRTGRVTPESVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQ 226 (424)
Q Consensus 148 ~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~ 226 (424)
..|+|||.+.+..++.++|||||||++|||++ |..|+..... ......+........+..++.++.+++.+||.
T Consensus 175 ~~y~~PE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~ 249 (279)
T cd05109 175 IKWMALESILHRRFTHQSDVWSYGVTVWELMTFGAKPYDGIPA-----REIPDLLEKGERLPQPPICTIDVYMIMVKCWM 249 (279)
T ss_pred hhhCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCH-----HHHHHHHHCCCcCCCCccCCHHHHHHHHHHcC
Confidence 78999999998889999999999999999998 7766644211 11122222222233445678899999999999
Q ss_pred cCcCCCCCHHHHHHHHHHHhhh
Q 014478 227 SEARERPNAKSLVISLMSLQKE 248 (424)
Q Consensus 227 ~dp~~Rps~~~~~~~l~~~~~~ 248 (424)
.||++||++.+++..|..+...
T Consensus 250 ~dp~~Rp~~~~l~~~l~~~~~~ 271 (279)
T cd05109 250 IDSECRPRFRELVDEFSRMARD 271 (279)
T ss_pred CChhhCcCHHHHHHHHHHhhcC
Confidence 9999999999999988877654
|
Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve |
| >cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.9e-39 Score=295.65 Aligned_cols=238 Identities=19% Similarity=0.263 Sum_probs=191.5
Q ss_pred CCCcccceeeeec-----ceecccccCCCc---hhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCe------eeEEEecC
Q 014478 2 GGRCSKFSICWFH-----CHLKSSVLESSD---LGETLNLEEAKAVGNLRSERLANLIGCCYEADE------RLLVAEFM 67 (424)
Q Consensus 2 G~~g~v~~~~~~~-----~~v~~~~~~~~~---~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~------~~lv~e~~ 67 (424)
||+|.||.+.+.. ..+++|++.... .....+.+|++.++.++||||+++++++..... .+++|||+
T Consensus 10 G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~v~e~~ 89 (273)
T cd05035 10 GEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDHPNVMKLIGVCFEASSLQKIPKPMVILPFM 89 (273)
T ss_pred CCCceEEEEEEecCCCCcceEEEEEeccCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEeeeccCCccccCcccEEEEecc
Confidence 8999999998732 457777665432 334678899999999999999999999876554 78999999
Q ss_pred CCCCHHhHhccC----CCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCCC-
Q 014478 68 PNETLAKHLFHW----ETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGK- 142 (424)
Q Consensus 68 ~~gsL~~~l~~~----~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~~- 142 (424)
++|+|..++... ....+++..+..++.|++.||.|||+++ ++||||||+||++++++.+||+|||+++......
T Consensus 90 ~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~~~-i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~ 168 (273)
T cd05035 90 KHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSNRN-FIHRDLAARNCMLREDMTVCVADFGLSKKIYSGDY 168 (273)
T ss_pred CCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCC-eeccccchheEEECCCCeEEECCccceeecccccc
Confidence 999999988432 2246899999999999999999999999 9999999999999999999999999988654322
Q ss_pred -----ccccCccCCCccccccCCCCCCcceehhHHHHHHHhh-CCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHH
Q 014478 143 -----SYSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTE 216 (424)
Q Consensus 143 -----~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (424)
...++..|+|||.+.+..++.++|||||||++|||++ |..|+..... ......+........+..++.+
T Consensus 169 ~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~SlG~il~el~~~g~~p~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~ 243 (273)
T cd05035 169 YRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGQTPYPGVEN-----HEIYDYLRHGNRLKQPEDCLDE 243 (273)
T ss_pred ccccccccCCccccCHhhcccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCH-----HHHHHHHHcCCCCCCCcCCCHH
Confidence 1234678999999988889999999999999999999 7766654321 1122222222233445667889
Q ss_pred HHHHHHHhcccCcCCCCCHHHHHHHHHHH
Q 014478 217 LVRLASRCLQSEARERPNAKSLVISLMSL 245 (424)
Q Consensus 217 l~~li~~cl~~dp~~Rps~~~~~~~l~~~ 245 (424)
+.+++.+||+.||++|||+.++++.|+.+
T Consensus 244 ~~~li~~~l~~~p~~Rp~~~e~~~~l~~~ 272 (273)
T cd05035 244 LYDLMYSCWRADPKDRPTFTKLREVLENI 272 (273)
T ss_pred HHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 99999999999999999999999998865
|
Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu |
| >cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-39 Score=295.71 Aligned_cols=237 Identities=21% Similarity=0.250 Sum_probs=191.9
Q ss_pred CCCcccceeeeec-----ceecccccCC--CchhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHh
Q 014478 2 GGRCSKFSICWFH-----CHLKSSVLES--SDLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAK 74 (424)
Q Consensus 2 G~~g~v~~~~~~~-----~~v~~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~ 74 (424)
|++|.||.+.+.. ..+++|++.. .......|..|+.+++.++||||+++++++..+...++||||+++|+|.+
T Consensus 15 g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e~~~~~~L~~ 94 (269)
T cd05065 15 GEFGEVCRGRLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSRPVMIITEFMENGALDS 94 (269)
T ss_pred CCCCeEEEEEEecCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCcCcceEEEEECCCCceEEEEecCCCCcHHH
Confidence 8999999998742 2367776654 33346789999999999999999999999999889999999999999999
Q ss_pred HhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCCCc-------cc--
Q 014478 75 HLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKS-------YS-- 145 (424)
Q Consensus 75 ~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~~~-------~~-- 145 (424)
++... ...+++.+++.++.|++.||.|||+++ ++||||||+||+++.++.+||+|||+++....... ..
T Consensus 95 ~l~~~-~~~~~~~~~~~i~~~l~~al~~lH~~g-~~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~ 172 (269)
T cd05065 95 FLRQN-DGQFTVIQLVGMLRGIAAGMKYLSEMN-YVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSSLGGK 172 (269)
T ss_pred HHhhC-CCCCCHHHHHHHHHHHHHHHHHHHHCC-EeecccChheEEEcCCCcEEECCCccccccccCccccccccccCCC
Confidence 98652 456899999999999999999999999 99999999999999999999999999875443211 11
Q ss_pred cCccCCCccccccCCCCCCcceehhHHHHHHHhh-CCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHHHHHHHHHh
Q 014478 146 TNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRC 224 (424)
Q Consensus 146 gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c 224 (424)
.+..|+|||.+.+..++.++|||||||++|||++ |..||...... .....+........+..++..+.+++.+|
T Consensus 173 ~~~~y~~PE~~~~~~~~~~~DvwslG~~l~e~l~~g~~p~~~~~~~-----~~~~~i~~~~~~~~~~~~~~~~~~li~~~ 247 (269)
T cd05065 173 IPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQ-----DVINAIEQDYRLPPPMDCPTALHQLMLDC 247 (269)
T ss_pred cceeecCHhHhccCcccchhhhhhhHHHHHHHhcCCCCCCCCCCHH-----HHHHHHHcCCcCCCcccCCHHHHHHHHHH
Confidence 1357999999998889999999999999999886 88776543211 11111222223334456788899999999
Q ss_pred cccCcCCCCCHHHHHHHHHHH
Q 014478 225 LQSEARERPNAKSLVISLMSL 245 (424)
Q Consensus 225 l~~dp~~Rps~~~~~~~l~~~ 245 (424)
|..+|++||++.+++..|+.+
T Consensus 248 l~~~p~~Rp~~~~i~~~l~~~ 268 (269)
T cd05065 248 WQKDRNARPKFGQIVSTLDKM 268 (269)
T ss_pred cCCChhhCcCHHHHHHHHHhh
Confidence 999999999999999888764
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr |
| >KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-40 Score=313.63 Aligned_cols=230 Identities=19% Similarity=0.282 Sum_probs=195.7
Q ss_pred CCCcccceeee--ecceecccccCCCc----hhhhHHHHHHHHHhcC-CCcCcceeEEEEEeCCeeeEEEecCCCCCHHh
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESSD----LGETLNLEEAKAVGNL-RSERLANLIGCCYEADERLLVAEFMPNETLAK 74 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~~----~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~ 74 (424)
|+||.|+.+.. .+...|+|++++.. ++.+..+.|.+++... +||.+++++..|.+..++|+||||+.||++..
T Consensus 379 GsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~fQT~~~l~fvmey~~Ggdm~~ 458 (694)
T KOG0694|consen 379 GSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSCFQTKEHLFFVMEYVAGGDLMH 458 (694)
T ss_pred CcCceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeecccccccCCeEEEEEEecCCCcEEE
Confidence 89999999987 55678888887655 4466778899988888 59999999999999999999999999999666
Q ss_pred HhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCC----CCCccccCccC
Q 014478 75 HLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSR----DGKSYSTNLAF 150 (424)
Q Consensus 75 ~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~----~~~~~~gt~~y 150 (424)
+.+ .+.+++..+.-++..|+.||.|||+++ |||||||.+|||+|.+|++||+|||+++... ...+++||+.|
T Consensus 459 ~~~---~~~F~e~rarfyaAev~l~L~fLH~~~-IIYRDlKLdNiLLD~eGh~kiADFGlcKe~m~~g~~TsTfCGTpey 534 (694)
T KOG0694|consen 459 HIH---TDVFSEPRARFYAAEVVLGLQFLHENG-IIYRDLKLDNLLLDTEGHVKIADFGLCKEGMGQGDRTSTFCGTPEF 534 (694)
T ss_pred EEe---cccccHHHHHHHHHHHHHHHHHHHhcC-ceeeecchhheEEcccCcEEecccccccccCCCCCccccccCChhh
Confidence 553 468999999999999999999999999 9999999999999999999999999999754 33578999999
Q ss_pred CCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHHHHHHHHHhcccCcC
Q 014478 151 TPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEAR 230 (424)
Q Consensus 151 ~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~ 230 (424)
||||++.+..|+...|.|||||++|||+.|+.||+++..+ ..+..++... ..+|..++.+..++++++|.++|+
T Consensus 535 ~aPEil~e~~Yt~aVDWW~lGVLlyeML~Gq~PF~gddEe----e~FdsI~~d~--~~yP~~ls~ea~~il~~ll~k~p~ 608 (694)
T KOG0694|consen 535 LAPEVLTEQSYTRAVDWWGLGVLLYEMLVGESPFPGDDEE----EVFDSIVNDE--VRYPRFLSKEAIAIMRRLLRKNPE 608 (694)
T ss_pred cChhhhccCcccchhhHHHHHHHHHHHHcCCCCCCCCCHH----HHHHHHhcCC--CCCCCcccHHHHHHHHHHhccCcc
Confidence 9999999999999999999999999999999999976322 2222233222 246777899999999999999999
Q ss_pred CCC-C----HHHHHHH
Q 014478 231 ERP-N----AKSLVIS 241 (424)
Q Consensus 231 ~Rp-s----~~~~~~~ 241 (424)
+|- + +.+|.++
T Consensus 609 kRLG~~e~d~~~i~~h 624 (694)
T KOG0694|consen 609 KRLGSGERDAEDIKKH 624 (694)
T ss_pred cccCCCCCCchhhhhC
Confidence 995 3 5666554
|
|
| >cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-39 Score=295.84 Aligned_cols=241 Identities=13% Similarity=0.172 Sum_probs=194.9
Q ss_pred CCCcccceeee--ecceecccccCC----CchhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHhH
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLES----SDLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKH 75 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~----~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~ 75 (424)
|++|.||.+.+ .+..+++|.+.. .......+.+|+++++.++||||+++++++...+..+++|||+++|+|.++
T Consensus 13 g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~ 92 (267)
T cd08228 13 GQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPNVIKYLDSFIEDNELNIVLELADAGDLSQM 92 (267)
T ss_pred CCCeeEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCCCcceeeeeeeEEECCeEEEEEEecCCCcHHHH
Confidence 88999999987 556677775532 223355788999999999999999999999999999999999999999988
Q ss_pred hccC--CCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCC----CccccCcc
Q 014478 76 LFHW--ETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG----KSYSTNLA 149 (424)
Q Consensus 76 l~~~--~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~----~~~~gt~~ 149 (424)
+... ....+++..+..++.|++.||.|||+++ ++|+||||+||+++.++.++|+|||++...... ....++..
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~-i~H~dl~~~nil~~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~ 171 (267)
T cd08228 93 IKYFKKQKRLIPERTVWKYFVQLCSAVEHMHSRR-VMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSLVGTPY 171 (267)
T ss_pred HHHhhhccCCCCHHHHHHHHHHHHHHHHHHhhCC-eeCCCCCHHHEEEcCCCCEEECccccceeccchhHHHhcCCCCcc
Confidence 8532 2345889999999999999999999999 999999999999999999999999998765432 23467889
Q ss_pred CCCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhc-ccCCCCCchhHHHHHHHHHHhcccC
Q 014478 150 FTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDS-ALEGHFSNDEGTELVRLASRCLQSE 228 (424)
Q Consensus 150 y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~li~~cl~~d 228 (424)
|+|||.+.+..++.++|+||||+++|+|++|+.|+........ .....+.. ..+...+...+..+.+++.+||..+
T Consensus 172 ~~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~p~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~ 248 (267)
T cd08228 172 YMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLF---SLCQKIEQCDYPPLPTEHYSEKLRELVSMCIYPD 248 (267)
T ss_pred ccChhhhccCCCCchhhHHHHHHHHHHHhcCCCCCccccccHH---HHHHHHhcCCCCCCChhhcCHHHHHHHHHHCCCC
Confidence 9999999888899999999999999999999988765321111 11111111 1222223356678999999999999
Q ss_pred cCCCCCHHHHHHHHHHHh
Q 014478 229 ARERPNAKSLVISLMSLQ 246 (424)
Q Consensus 229 p~~Rps~~~~~~~l~~~~ 246 (424)
|++|||+.++++.++++.
T Consensus 249 p~~Rp~~~~vl~~~~~~~ 266 (267)
T cd08228 249 PDQRPDIGYVHQIAKQMH 266 (267)
T ss_pred cccCcCHHHHHHHHHHhc
Confidence 999999999999998763
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase |
| >cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.4e-40 Score=315.56 Aligned_cols=234 Identities=18% Similarity=0.185 Sum_probs=188.3
Q ss_pred CCCcccceeee--ecceecccccCCCc----hhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHhH
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESSD----LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKH 75 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~~----~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~ 75 (424)
|++|.||.+.. .+..+++|++.... .....+.+|+++|++++||||+++++.+.+++..++||||++||+|.++
T Consensus 12 G~~g~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~E~~~~g~L~~~ 91 (376)
T cd05598 12 GAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMDYIPGGDMMSL 91 (376)
T ss_pred CCCeEEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCCCCcceEEEEEEcCCEEEEEEeCCCCCcHHHH
Confidence 89999999887 45677888775432 2345678899999999999999999999999999999999999999999
Q ss_pred hccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCC---------------
Q 014478 76 LFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRD--------------- 140 (424)
Q Consensus 76 l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~--------------- 140 (424)
+.. .+.+++..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||++.....
T Consensus 92 i~~--~~~~~~~~~~~~~~qi~~al~~lH~~~-ivHrDlkp~Nill~~~~~ikL~DFG~a~~~~~~~~~~~~~~~~~~~~ 168 (376)
T cd05598 92 LIR--LGIFEEDLARFYIAELTCAIESVHKMG-FIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSKYYQKGDHHRQ 168 (376)
T ss_pred HHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC-eEeCCCCHHHEEECCCCCEEEEeCCCCcccccccccccccccccccc
Confidence 964 456889999999999999999999999 99999999999999999999999999742210
Q ss_pred --------------------------------CCccccCccCCCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchh
Q 014478 141 --------------------------------GKSYSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHA 188 (424)
Q Consensus 141 --------------------------------~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~ 188 (424)
.....||+.|||||++.+..++.++|||||||++|||++|+.||....
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~ 248 (376)
T cd05598 169 DSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVGQPPFLADT 248 (376)
T ss_pred ccccccccccccccccccchhhhhhhhcccccccccCCCccccCHHHHcCCCCCcceeeeeccceeeehhhCCCCCCCCC
Confidence 012368999999999998889999999999999999999999887642
Q ss_pred hHHHhhhhhhHhhhcccCCCCCchhHHHHHHHHHHhcccCcCCCC---CHHHHHHH
Q 014478 189 LDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERP---NAKSLVIS 241 (424)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rp---s~~~~~~~ 241 (424)
....... ...............+++++.++|.+|+ .+|.+|+ ++.+++.+
T Consensus 249 ~~~~~~~--i~~~~~~~~~~~~~~~s~~~~~li~~l~-~~p~~R~~~~t~~ell~h 301 (376)
T cd05598 249 PAETQLK--VINWETTLHIPSQAKLSREASDLILRLC-CGAEDRLGKNGADEIKAH 301 (376)
T ss_pred HHHHHHH--HhccCccccCCCCCCCCHHHHHHHHHHh-cCHhhcCCCCCHHHHhCC
Confidence 2111111 1111111111223356788999999977 5999999 89999876
|
Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. |
| >cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-39 Score=293.47 Aligned_cols=234 Identities=22% Similarity=0.317 Sum_probs=193.5
Q ss_pred CCCcccceeeeecceecccccCCCchhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHhHhccCCC
Q 014478 2 GGRCSKFSICWFHCHLKSSVLESSDLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWET 81 (424)
Q Consensus 2 G~~g~v~~~~~~~~~v~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~ 81 (424)
||+|.||.+.+.+..+++|...... ....+.+|+.+++.++||||+++++++..+ ..++||||+++++|.+++.....
T Consensus 17 g~~g~v~~~~~~~~~~~iK~~~~~~-~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~-~~~~v~e~~~~~~L~~~l~~~~~ 94 (254)
T cd05083 17 GEFGAVLQGEYTGQKVAVKNIKCDV-TAQAFLEETAVMTKLHHKNLVRLLGVILHN-GLYIVMELMSKGNLVNFLRTRGR 94 (254)
T ss_pred CCCCceEecccCCCceEEEeecCcc-hHHHHHHHHHHHHhCCCCCcCeEEEEEcCC-CcEEEEECCCCCCHHHHHHhcCc
Confidence 8999999998888888887775443 346788999999999999999999998765 47999999999999999976445
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCC-CccccCccCCCccccccCC
Q 014478 82 QPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG-KSYSTNLAFTPPEYMRTGR 160 (424)
Q Consensus 82 ~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~-~~~~gt~~y~aPE~~~~~~ 160 (424)
..+++.+++.++.|++.||.|||+.+ ++||||||+||+++.++.+||+|||+++..... .....+..|+|||.+.++.
T Consensus 95 ~~~~~~~~~~~~~qi~~al~~lH~~~-~~H~dl~p~nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~y~~pe~~~~~~ 173 (254)
T cd05083 95 ALVSVIQLLQFSLDVAEGMEYLESKK-LVHRDLAARNILVSEDGVAKVSDFGLARVGSMGVDNSKLPVKWTAPEALKHKK 173 (254)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHhCC-eeccccCcceEEEcCCCcEEECCCccceeccccCCCCCCCceecCHHHhccCC
Confidence 56899999999999999999999999 999999999999999999999999998765433 2233457899999998888
Q ss_pred CCCCcceehhHHHHHHHhh-CCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHHHHHHHHHhcccCcCCCCCHHHHH
Q 014478 161 VTPESVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERPNAKSLV 239 (424)
Q Consensus 161 ~~~~~Dv~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~~~ 239 (424)
++.++|+|||||++|+|++ |..||....... .............+..++.++.+++.+||..+|++||++++++
T Consensus 174 ~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~ 248 (254)
T cd05083 174 FSSKSDVWSYGVLLWEVFSYGRAPYPKMSLKE-----VKECVEKGYRMEPPEGCPADVYVLMTSCWETEPKKRPSFHKLR 248 (254)
T ss_pred cCchhhHHHHHHHHHHHHhCCCCCCccCCHHH-----HHHHHhCCCCCCCCCcCCHHHHHHHHHHcCCChhhCcCHHHHH
Confidence 9999999999999999998 887776542221 1122222233334556778999999999999999999999999
Q ss_pred HHHH
Q 014478 240 ISLM 243 (424)
Q Consensus 240 ~~l~ 243 (424)
..|+
T Consensus 249 ~~l~ 252 (254)
T cd05083 249 EKLE 252 (254)
T ss_pred HHHc
Confidence 8775
|
Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki |
| >cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-39 Score=294.07 Aligned_cols=231 Identities=22% Similarity=0.310 Sum_probs=185.7
Q ss_pred CCCcccceeeeecce------------ecccccCCCchhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCC
Q 014478 2 GGRCSKFSICWFHCH------------LKSSVLESSDLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPN 69 (424)
Q Consensus 2 G~~g~v~~~~~~~~~------------v~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~ 69 (424)
|++|.||++.+.... ++.|++.........|.+|+.+++.++||||+++++++.. ...++||||+++
T Consensus 6 G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~lv~e~~~~ 84 (259)
T cd05037 6 GTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHRDSLAFFETASLMSQLSHKHLVKLYGVCVR-DENIMVEEYVKF 84 (259)
T ss_pred cccceEEEEEEeccCCccccCCccceeeeeeccccchhhHHHHHHHHHHHHcCCCcchhheeeEEec-CCcEEEEEcCCC
Confidence 899999999985443 4555555444436789999999999999999999999988 778999999999
Q ss_pred CCHHhHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCC-------CeEEccccccccCCCCC
Q 014478 70 ETLAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDG-------NPRLSSFGLMKNSRDGK 142 (424)
Q Consensus 70 gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~-------~~kl~Dfg~~~~~~~~~ 142 (424)
|+|.+++... ...+++..+..++.||+.||.|||+++ ++||||||+||+++.++ .+||+|||++.......
T Consensus 85 ~~L~~~l~~~-~~~~~~~~~~~~~~~i~~~l~~LH~~~-i~H~dlkp~Nill~~~~~~~~~~~~~kl~Dfg~a~~~~~~~ 162 (259)
T cd05037 85 GPLDVFLHRE-KNNVSLHWKLDVAKQLASALHYLEDKK-LVHGNVCGKNILVARYGLNEGYVPFIKLSDPGIPITVLSRE 162 (259)
T ss_pred CcHHHHHHhh-ccCCCHHHHHHHHHHHHHHHHHHhhCC-eecccCccceEEEecCccccCCceeEEeCCCCccccccccc
Confidence 9999999652 337899999999999999999999999 99999999999998887 79999999998776655
Q ss_pred ccccCccCCCccccccC--CCCCCcceehhHHHHHHHhhC-CCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHHHHH
Q 014478 143 SYSTNLAFTPPEYMRTG--RVTPESVVYSFGTMLLDLLSG-KHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVR 219 (424)
Q Consensus 143 ~~~gt~~y~aPE~~~~~--~~~~~~Dv~slG~~l~el~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 219 (424)
...++..|+|||++.+. .++.++||||||+++|+|++| ..|+.... ..... ..... ....+......+.+
T Consensus 163 ~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~~~~~l~~~~~~p~~~~~--~~~~~---~~~~~--~~~~~~~~~~~~~~ 235 (259)
T cd05037 163 ERVERIPWIAPECIRNGQASLTIAADKWSFGTTLLEICSNGEEPLSTLS--SSEKE---RFYQD--QHRLPMPDCAELAN 235 (259)
T ss_pred ccccCCCccChhhhcCCCCCcchhhHHHHHHHHHHHHHhCCCCCcccCC--chhHH---HHHhc--CCCCCCCCchHHHH
Confidence 56678899999999876 689999999999999999996 43333221 11111 11111 11122222478999
Q ss_pred HHHHhcccCcCCCCCHHHHHHHH
Q 014478 220 LASRCLQSEARERPNAKSLVISL 242 (424)
Q Consensus 220 li~~cl~~dp~~Rps~~~~~~~l 242 (424)
++.+||..+|.+|||+.++++.|
T Consensus 236 li~~~l~~~p~~Rpt~~~il~~l 258 (259)
T cd05037 236 LINQCWTYDPTKRPSFRAILRDL 258 (259)
T ss_pred HHHHHhccChhhCCCHHHHHHhc
Confidence 99999999999999999999775
|
Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki |
| >PHA03212 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-39 Score=310.75 Aligned_cols=231 Identities=17% Similarity=0.167 Sum_probs=181.6
Q ss_pred CCCcccceeee--ecceecccccCCCchhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHhHhccC
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESSDLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHW 79 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~ 79 (424)
|+||.||.+.. .+..+++|+.. ...+.+|++++++++||||+++++++..+...++|||++. ++|..++..
T Consensus 103 G~~g~V~~~~d~~~~~~vaiK~~~-----~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~- 175 (391)
T PHA03212 103 GAEGFAFACIDNKTCEHVVIKAGQ-----RGGTATEAHILRAINHPSIIQLKGTFTYNKFTCLILPRYK-TDLYCYLAA- 175 (391)
T ss_pred CCCeEEEEEEECCCCCEEEEechh-----hhhhHHHHHHHHhCCCCCCCCEeEEEEECCeeEEEEecCC-CCHHHHHHh-
Confidence 89999999987 45666666432 3457889999999999999999999999999999999995 689888864
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCC-----CCccccCccCCCcc
Q 014478 80 ETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRD-----GKSYSTNLAFTPPE 154 (424)
Q Consensus 80 ~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~-----~~~~~gt~~y~aPE 154 (424)
...+++.+++.++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++.... .....||+.|+|||
T Consensus 176 -~~~l~~~~~~~i~~qi~~aL~ylH~~~-IvHrDiKP~NIll~~~~~vkL~DFG~a~~~~~~~~~~~~~~~gt~~y~aPE 253 (391)
T PHA03212 176 -KRNIAICDILAIERSVLRAIQYLHENR-IIHRDIKAENIFINHPGDVCLGDFGAACFPVDINANKYYGWAGTIATNAPE 253 (391)
T ss_pred -cCCCCHHHHHHHHHHHHHHHHHHHhCC-cccCCCChHhEEEcCCCCEEEEeCCcccccccccccccccccCccCCCChh
Confidence 457899999999999999999999999 99999999999999999999999999875322 12346899999999
Q ss_pred ccccCCCCCCcceehhHHHHHHHhhCCCCCCchhh--------HHHhh-----------------hhhh----Hhhhccc
Q 014478 155 YMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHAL--------DLIRS-----------------KNFL----LLMDSAL 205 (424)
Q Consensus 155 ~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~--------~~~~~-----------------~~~~----~~~~~~~ 205 (424)
++.+..++.++|||||||++|||++|..|+..... ..... .... .......
T Consensus 254 ~~~~~~~~~~~DiwSlGvil~elltg~~p~~~~~~~~~~~~~~~~l~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~ 333 (391)
T PHA03212 254 LLARDPYGPAVDIWSAGIVLFEMATCHDSLFEKDGLDGDCDSDRQIKLIIRRSGTHPNEFPIDAQANLDEIYIGLAKKSS 333 (391)
T ss_pred hhcCCCCCcHHHHHHHHHHHHHHHHCCCCcCCcccccccCchhHHHHHHHHHhcCChhhcCcchhHHHHHHHHHHHhccC
Confidence 99988899999999999999999999976543100 00000 0000 0000000
Q ss_pred --CCCCC-----chhHHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 014478 206 --EGHFS-----NDEGTELVRLASRCLQSEARERPNAKSLVIS 241 (424)
Q Consensus 206 --~~~~~-----~~~~~~l~~li~~cl~~dp~~Rps~~~~~~~ 241 (424)
....+ ...+.++.++|.+||+.||.+|||+++++++
T Consensus 334 ~~~~~~~~~~~~~~~~~~l~~Li~~mL~~dP~~Rpta~elL~h 376 (391)
T PHA03212 334 RKPGSRPLWTNLYELPIDLEYLICKMLAFDAHHRPSAEALLDF 376 (391)
T ss_pred CCCCCCCCHHHHhhhhhhHHHHHHHHhcCChhhCCCHHHHhcC
Confidence 00000 1346789999999999999999999999865
|
|
| >cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-39 Score=297.43 Aligned_cols=236 Identities=18% Similarity=0.243 Sum_probs=191.8
Q ss_pred CCCcccceeeeec-------ceecccccCCCc--hhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCH
Q 014478 2 GGRCSKFSICWFH-------CHLKSSVLESSD--LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETL 72 (424)
Q Consensus 2 G~~g~v~~~~~~~-------~~v~~~~~~~~~--~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL 72 (424)
|++|.||.+.+.. ..+++|.+.... .....+.+|+.++..++||||+++++++..+...++||||+++|+|
T Consensus 17 g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~~~~~~L 96 (277)
T cd05032 17 GSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRERIEFLNEASVMKEFNCHHVVRLLGVVSTGQPTLVVMELMAKGDL 96 (277)
T ss_pred CCCceEEEEEEeccCCCCcceeEEEEecCCccCHHHHHHHHHHHHHHHhCCCCceeEEEEEEcCCCCcEEEEecCCCCCH
Confidence 8999999988753 446777665333 3355788999999999999999999999999999999999999999
Q ss_pred HhHhccCC--------CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCC---
Q 014478 73 AKHLFHWE--------TQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG--- 141 (424)
Q Consensus 73 ~~~l~~~~--------~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~--- 141 (424)
.+++.... ...+++..++.++.|++.||.|||+++ ++||||||+||+++.++.+||+|||+++.....
T Consensus 97 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~-i~H~di~p~nill~~~~~~kl~dfg~~~~~~~~~~~ 175 (277)
T cd05032 97 KSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAAKK-FVHRDLAARNCMVAEDLTVKIGDFGMTRDIYETDYY 175 (277)
T ss_pred HHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCC-ccccccChheEEEcCCCCEEECCcccchhhccCccc
Confidence 99985421 234788899999999999999999999 999999999999999999999999998754332
Q ss_pred ---CccccCccCCCccccccCCCCCCcceehhHHHHHHHhh-CCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHHH
Q 014478 142 ---KSYSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTEL 217 (424)
Q Consensus 142 ---~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 217 (424)
....++..|+|||.+.++.++.++|||||||++||+++ |..|+....... .............+..++.++
T Consensus 176 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~ 250 (277)
T cd05032 176 RKGGKGLLPVRWMAPESLKDGVFTTKSDVWSFGVVLWEMATLAEQPYQGLSNEE-----VLKFVIDGGHLDLPENCPDKL 250 (277)
T ss_pred ccCCCCCccccccCHHHHhcCCCCcccchHHHHHHHHHhhccCCCCCccCCHHH-----HHHHHhcCCCCCCCCCCCHHH
Confidence 22345788999999988889999999999999999998 887765532211 111222222334455678899
Q ss_pred HHHHHHhcccCcCCCCCHHHHHHHHH
Q 014478 218 VRLASRCLQSEARERPNAKSLVISLM 243 (424)
Q Consensus 218 ~~li~~cl~~dp~~Rps~~~~~~~l~ 243 (424)
.+++.+||..+|++|||+.++++.|+
T Consensus 251 ~~li~~~l~~~p~~Rpt~~~l~~~l~ 276 (277)
T cd05032 251 LELMRMCWQYNPKMRPTFLEIVSSLK 276 (277)
T ss_pred HHHHHHHcCCChhhCCCHHHHHHHhc
Confidence 99999999999999999999998875
|
Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological |
| >KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-39 Score=285.92 Aligned_cols=237 Identities=17% Similarity=0.192 Sum_probs=189.2
Q ss_pred CCCcccceeee--ecceecccccCCCchh---hhHHHHHHHHHhcCCCcCcceeEEEEEe--CCeeeEEEecCCCCCHHh
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESSDLG---ETLNLEEAKAVGNLRSERLANLIGCCYE--ADERLLVAEFMPNETLAK 74 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~~~~---~~~~~~E~~~l~~l~h~~iv~~~~~~~~--~~~~~lv~e~~~~gsL~~ 74 (424)
|++|.||++.+ .+..||.|++.-+... .-..++||.+|.+++|||||.+-.+... .+.+|||||||+. +|..
T Consensus 87 GtyGiVYRakdk~t~eIVALKr~kmekek~GFPItsLREIniLl~~~H~NIV~vkEVVvG~~~d~iy~VMe~~Eh-DLks 165 (419)
T KOG0663|consen 87 GTYGVVYRAKDKKTDEIVALKRLKMEKEKEGFPITSLREINILLKARHPNIVEVKEVVVGSNMDKIYIVMEYVEH-DLKS 165 (419)
T ss_pred CcceeEEEeccCCcceeEEeeecccccccCCCcchhHHHHHHHHhcCCCCeeeeEEEEeccccceeeeeHHHHHh-hHHH
Confidence 89999999998 5667887777544422 2245789999999999999999888765 3569999999987 9999
Q ss_pred HhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCC----CccccCccC
Q 014478 75 HLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG----KSYSTNLAF 150 (424)
Q Consensus 75 ~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~----~~~~gt~~y 150 (424)
++... +++|...++.-+..|+++||+|||++. |+||||||+|+|+++.|.+||+|||+|+..+.. +....|..|
T Consensus 166 l~d~m-~q~F~~~evK~L~~QlL~glk~lH~~w-ilHRDLK~SNLLm~~~G~lKiaDFGLAR~ygsp~k~~T~lVVTLWY 243 (419)
T KOG0663|consen 166 LMETM-KQPFLPGEVKTLMLQLLRGLKHLHDNW-ILHRDLKTSNLLLSHKGILKIADFGLAREYGSPLKPYTPLVVTLWY 243 (419)
T ss_pred HHHhc-cCCCchHHHHHHHHHHHHHHHHHhhce-eEecccchhheeeccCCcEEecccchhhhhcCCcccCcceEEEeee
Confidence 98763 578999999999999999999999999 999999999999999999999999999987755 445679999
Q ss_pred CCccccccCC-CCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHh----------------hh---------cc
Q 014478 151 TPPEYMRTGR-VTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLL----------------MD---------SA 204 (424)
Q Consensus 151 ~aPE~~~~~~-~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~----------------~~---------~~ 204 (424)
.|||.+.+.+ |+...|+||+||++.||+++++.|++.+.-.--...+..+ +. ..
T Consensus 244 RaPELLLG~~tyst~iDMWSvGCI~aE~l~~kPlf~G~sE~dQl~~If~llGtPte~iwpg~~~lp~~k~~~f~~~pyn~ 323 (419)
T KOG0663|consen 244 RAPELLLGAKTYSTAVDMWSVGCIFAELLTQKPLFPGKSEIDQLDKIFKLLGTPSEAIWPGYSELPAVKKMTFSEHPYNN 323 (419)
T ss_pred cCHHHhcCCcccCcchhhhhHHHHHHHHHhcCCCCCCCchHHHHHHHHHHhCCCccccCCCccccchhhccccCCCCchh
Confidence 9999998754 8999999999999999999998888752211111111100 00 00
Q ss_pred cCCCCCch-hHHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 014478 205 LEGHFSND-EGTELVRLASRCLQSEARERPNAKSLVIS 241 (424)
Q Consensus 205 ~~~~~~~~-~~~~l~~li~~cl~~dp~~Rps~~~~~~~ 241 (424)
.+..++.. +++.-.+|+..+|..||.+|.|+++.+++
T Consensus 324 lr~kF~~~~lse~g~~Lln~llt~dP~kR~tA~~~L~h 361 (419)
T KOG0663|consen 324 LRKKFGALSLSEQGFDLLNKLLTYDPGKRITAEDGLKH 361 (419)
T ss_pred hhhhccccccchhHHHHHHHHhccCccccccHHHhhcc
Confidence 01111111 45778899999999999999999999876
|
|
| >cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-39 Score=301.29 Aligned_cols=238 Identities=17% Similarity=0.164 Sum_probs=182.0
Q ss_pred CCCcccceeeee---cceecccccCCCc---hhhhHHHHHHHHHhcC---CCcCcceeEEEEEe-----CCeeeEEEecC
Q 014478 2 GGRCSKFSICWF---HCHLKSSVLESSD---LGETLNLEEAKAVGNL---RSERLANLIGCCYE-----ADERLLVAEFM 67 (424)
Q Consensus 2 G~~g~v~~~~~~---~~~v~~~~~~~~~---~~~~~~~~E~~~l~~l---~h~~iv~~~~~~~~-----~~~~~lv~e~~ 67 (424)
|++|.||.+.+. +..+++|++.... .....+.+|+.+++.+ +||||++++++|.. ....++||||+
T Consensus 12 G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~~~~~~~lv~e~~ 91 (290)
T cd07862 12 GAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHV 91 (290)
T ss_pred CCCeEEEEEEEcCCCCeEEEEEEEecccCCCCchHHHHHHHHHHHhhcccCCCCcceEEEEEecccCCCCCcEEEEEccC
Confidence 899999999873 4557777664332 2234566787777666 69999999999863 34578999999
Q ss_pred CCCCHHhHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCC---Ccc
Q 014478 68 PNETLAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG---KSY 144 (424)
Q Consensus 68 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~---~~~ 144 (424)
+ ++|.+++.......+++.++..++.|++.||.|||+++ ++||||||+|||++.++.+||+|||+++..... ...
T Consensus 92 ~-~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~-iiH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~ 169 (290)
T cd07862 92 D-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHR-VVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSV 169 (290)
T ss_pred C-CCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC-eeeCCCCHHHEEEcCCCCEEEccccceEeccCCcccccc
Confidence 7 59999987545567899999999999999999999999 999999999999999999999999998765432 234
Q ss_pred ccCccCCCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhh--------------hccc-----
Q 014478 145 STNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLM--------------DSAL----- 205 (424)
Q Consensus 145 ~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~--------------~~~~----- 205 (424)
.||+.|+|||++.+..++.++|||||||++|||++|..||........-........ ....
T Consensus 170 ~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (290)
T cd07862 170 VVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPRQAFHSKSA 249 (290)
T ss_pred cccccccChHHHhCCCCCCccchHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChhhchhhhcccchhccCCCC
Confidence 678999999999888899999999999999999999988765421111000000000 0000
Q ss_pred --CCCCCchhHHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 014478 206 --EGHFSNDEGTELVRLASRCLQSEARERPNAKSLVIS 241 (424)
Q Consensus 206 --~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~~~~~ 241 (424)
.....+.+++.+.+++.+||+.||++|||+.+++++
T Consensus 250 ~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~h 287 (290)
T cd07862 250 QPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSH 287 (290)
T ss_pred CCHHHHccCCCHHHHHHHHHHhccCchhcCCHHHHhcC
Confidence 000112356788999999999999999999999854
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla |
| >KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-40 Score=295.51 Aligned_cols=235 Identities=20% Similarity=0.223 Sum_probs=186.3
Q ss_pred CCCcccceeee--ecceecccccCCCchhhhHHHHHHHHHhcCCCcCcceeEEEEEeCC---e--eeEEEecCCCCCHHh
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESSDLGETLNLEEAKAVGNLRSERLANLIGCCYEAD---E--RLLVAEFMPNETLAK 74 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~---~--~~lv~e~~~~gsL~~ 74 (424)
|+||.||.+.. ....+|+|+.-.+... --+|+++|+.+.|||||++.-+|.... . ..+||||+|. ||.+
T Consensus 35 GsFg~Vyq~~~~e~~~~vAIKKv~~d~r~---knrEl~im~~l~HpNIV~L~~~f~~~~~~d~~~lnlVleymP~-tL~~ 110 (364)
T KOG0658|consen 35 GSFGVVYQAKLRETEEEVAIKKVLQDKRY---KNRELQIMRKLDHPNIVRLLYFFSSSTESDEVYLNLVLEYMPE-TLYR 110 (364)
T ss_pred cccceEEEEEEcCCCceeEEEEecCCCCc---CcHHHHHHHhcCCcCeeeEEEEEEecCCCchhHHHHHHHhchH-HHHH
Confidence 89999999987 4567888777655532 236999999999999999988886532 2 3499999987 9999
Q ss_pred HhccC--CCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCC-CCeEEccccccccCCCCC---ccccCc
Q 014478 75 HLFHW--ETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKD-GNPRLSSFGLMKNSRDGK---SYSTNL 148 (424)
Q Consensus 75 ~l~~~--~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~-~~~kl~Dfg~~~~~~~~~---~~~gt~ 148 (424)
++++. .+..++...+.-+..||++||.|||+.+ |+||||||.|+|+|.+ |.+||||||.|+....++ +...|.
T Consensus 111 ~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh~~~-IcHRDIKPqNlLvD~~tg~LKicDFGSAK~L~~~epniSYicSR 189 (364)
T KOG0658|consen 111 VIRHYTRANQRMPLLEIKLYTYQLFRGLAYLHSHG-ICHRDIKPQNLLVDPDTGVLKICDFGSAKVLVKGEPNISYICSR 189 (364)
T ss_pred HHHHHhhcCCCCceeeeHHHHHHHHHHHHHHHhcC-cccCCCChheEEEcCCCCeEEeccCCcceeeccCCCceeEEEec
Confidence 98631 3567888899999999999999999999 9999999999999876 899999999999876554 345689
Q ss_pred cCCCccccccC-CCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhh-----------------------hHhhhcc
Q 014478 149 AFTPPEYMRTG-RVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNF-----------------------LLLMDSA 204 (424)
Q Consensus 149 ~y~aPE~~~~~-~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~-----------------------~~~~~~~ 204 (424)
.|.|||.+.+. .|+.+.||||.|||+.||+-|++.|++......-...+ ..+....
T Consensus 190 yYRaPELifga~~Yt~~IDiWSaGCV~aELl~g~plFpG~s~~dQL~eIik~lG~Pt~e~I~~mn~~y~~~~~p~ik~~~ 269 (364)
T KOG0658|consen 190 YYRAPELIFGATEYTTSIDIWSAGCVMAELLKGQPLFPGDSSVDQLVEIIKVLGTPTREDIKSMNPNYTEFKFPQIKAHP 269 (364)
T ss_pred cccCHHHHcCccccCceeEEhhhhHHHHHHhcCCcccCCCCHHHHHHHHHHHhCCCCHHHHhhcCcccccccCccccccc
Confidence 99999999875 59999999999999999999999999863221111000 0011111
Q ss_pred cCCCCCchhHHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 014478 205 LEGHFSNDEGTELVRLASRCLQSEARERPNAKSLVIS 241 (424)
Q Consensus 205 ~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~~~~~ 241 (424)
...-+....+++..+|+.++|..+|.+|.++.+++.+
T Consensus 270 ~~~~~~~~~~~d~~dll~~~L~Y~P~~R~~~~~~l~h 306 (364)
T KOG0658|consen 270 WHKVFFKRLPPDALDLLSKLLQYSPSKRLSALEALAH 306 (364)
T ss_pred ceeecccCCCHHHHHHHHHHhccChhhcCCHHHHhcc
Confidence 1111334568899999999999999999999999865
|
|
| >cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.9e-39 Score=300.85 Aligned_cols=242 Identities=19% Similarity=0.309 Sum_probs=193.6
Q ss_pred CCCcccceeeee---------cceecccccCCC--chhhhHHHHHHHHHhcC-CCcCcceeEEEEEeCCeeeEEEecCCC
Q 014478 2 GGRCSKFSICWF---------HCHLKSSVLESS--DLGETLNLEEAKAVGNL-RSERLANLIGCCYEADERLLVAEFMPN 69 (424)
Q Consensus 2 G~~g~v~~~~~~---------~~~v~~~~~~~~--~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~~~~ 69 (424)
|++|.||.+.+. ...+++|.+... ......+.+|+++++++ +||||++++++|..++..+++|||+++
T Consensus 23 G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~ 102 (314)
T cd05099 23 GCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNATDKDLADLISEMELMKLIGKHKNIINLLGVCTQEGPLYVIVEYAAK 102 (314)
T ss_pred CCcccEEEeeecccCCccCCcceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCCeeeEEEEEccCCceEEEEecCCC
Confidence 899999988652 223555655432 23356788999999999 699999999999998889999999999
Q ss_pred CCHHhHhccCC--------------CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEcccccc
Q 014478 70 ETLAKHLFHWE--------------TQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLM 135 (424)
Q Consensus 70 gsL~~~l~~~~--------------~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~ 135 (424)
|+|.+++.... ...+++.++.+++.|++.||.|||+++ ++||||||+||+++.++.+||+|||++
T Consensus 103 g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~g-i~H~dlkp~Nill~~~~~~kL~Dfg~~ 181 (314)
T cd05099 103 GNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLESRR-CIHRDLAARNVLVTEDNVMKIADFGLA 181 (314)
T ss_pred CcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHHCC-eeeccccceeEEEcCCCcEEEcccccc
Confidence 99999996421 235889999999999999999999999 999999999999999999999999999
Q ss_pred ccCCCCC------ccccCccCCCccccccCCCCCCcceehhHHHHHHHhh-CCCCCCchhhHHHhhhhhhHhhhcccCCC
Q 014478 136 KNSRDGK------SYSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKNFLLLMDSALEGH 208 (424)
Q Consensus 136 ~~~~~~~------~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (424)
+...... ...++..|||||++.++.++.++||||||+++|+|++ |..||...... .............
T Consensus 182 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~-----~~~~~~~~~~~~~ 256 (314)
T cd05099 182 RGVHDIDYYKKTSNGRLPVKWMAPEALFDRVYTHQSDVWSFGILMWEIFTLGGSPYPGIPVE-----ELFKLLREGHRMD 256 (314)
T ss_pred ccccccccccccccCCCCccccCHHHHccCCcCccchhhHHHHHHHHHHhCCCCCCCCCCHH-----HHHHHHHcCCCCC
Confidence 8654321 1123467999999998889999999999999999999 77676543211 1112222222233
Q ss_pred CCchhHHHHHHHHHHhcccCcCCCCCHHHHHHHHHHHhhhh
Q 014478 209 FSNDEGTELVRLASRCLQSEARERPNAKSLVISLMSLQKEA 249 (424)
Q Consensus 209 ~~~~~~~~l~~li~~cl~~dp~~Rps~~~~~~~l~~~~~~~ 249 (424)
.+..++.++.+++.+||..||++|||+.++++.|..+....
T Consensus 257 ~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~l~~~~~~~ 297 (314)
T cd05099 257 KPSNCTHELYMLMRECWHAVPTQRPTFKQLVEALDKVLAAV 297 (314)
T ss_pred CCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHHHh
Confidence 45567789999999999999999999999999999887643
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-39 Score=294.09 Aligned_cols=237 Identities=23% Similarity=0.349 Sum_probs=196.3
Q ss_pred CCCcccceeeeec-ceecccccCCCchhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHhHhccCC
Q 014478 2 GGRCSKFSICWFH-CHLKSSVLESSDLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWE 80 (424)
Q Consensus 2 G~~g~v~~~~~~~-~~v~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~ 80 (424)
|++|.||.+.+.+ ..+++|.+.......+.+.+|+.++++++||||+++++++......++||||+++++|.+++....
T Consensus 17 g~~~~v~~~~~~~~~~~~vK~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~i~~~~ 96 (261)
T cd05034 17 GQFGEVWMGTWNGTTKVAVKTLKPGTMSPEAFLQEAQIMKKLRHDKLVQLYAVCSEEEPIYIVTEYMSKGSLLDFLKSGE 96 (261)
T ss_pred CcceEEEEEEEcCCceEEEEEecCCccCHHHHHHHHHHHhhCCCCCEeeeeeeeecCCceEEEEeccCCCCHHHHHhccc
Confidence 8899999988733 456777777666667789999999999999999999999998888999999999999999997655
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCCC-----ccccCccCCCccc
Q 014478 81 TQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGK-----SYSTNLAFTPPEY 155 (424)
Q Consensus 81 ~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~~-----~~~gt~~y~aPE~ 155 (424)
+..+++.++..++.|++.||.|||+++ ++|+||||+||+++.++.++|+|||+++...... ...++..|+|||.
T Consensus 97 ~~~~~~~~~~~~~~~i~~al~~lh~~~-i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~y~~PE~ 175 (261)
T cd05034 97 GKKLRLPQLVDMAAQIAEGMAYLESRN-YIHRDLAARNILVGENLVCKIADFGLARLIEDDEYTAREGAKFPIKWTAPEA 175 (261)
T ss_pred cCCCCHHHHHHHHHHHHHHHHHHHhCC-cccCCcchheEEEcCCCCEEECccccceeccchhhhhhhccCCCccccCHHH
Confidence 567999999999999999999999999 9999999999999999999999999987654321 1234568999999
Q ss_pred cccCCCCCCcceehhHHHHHHHhh-CCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHHHHHHHHHhcccCcCCCCC
Q 014478 156 MRTGRVTPESVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERPN 234 (424)
Q Consensus 156 ~~~~~~~~~~Dv~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps 234 (424)
+.+..++.++|+||||+++|+|++ |+.|+...... ..............+...+.++.+++.+||..+|++||+
T Consensus 176 ~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~ 250 (261)
T cd05034 176 ANYGRFTIKSDVWSFGILLTEIVTYGRVPYPGMTNR-----EVLEQVERGYRMPRPPNCPEELYDLMLQCWDKDPEERPT 250 (261)
T ss_pred hccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHH-----HHHHHHHcCCCCCCCCCCCHHHHHHHHHHcccCcccCCC
Confidence 998889999999999999999998 88777653211 111122222233344556789999999999999999999
Q ss_pred HHHHHHHHHH
Q 014478 235 AKSLVISLMS 244 (424)
Q Consensus 235 ~~~~~~~l~~ 244 (424)
++++.+.|+.
T Consensus 251 ~~~l~~~l~~ 260 (261)
T cd05034 251 FEYLQSFLED 260 (261)
T ss_pred HHHHHHHHhc
Confidence 9999988764
|
Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t |
| >cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6e-40 Score=310.25 Aligned_cols=233 Identities=17% Similarity=0.152 Sum_probs=189.7
Q ss_pred CCCcccceeee--ecceecccccCCCc----hhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHhH
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESSD----LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKH 75 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~~----~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~ 75 (424)
|++|.||.+.+ .+..+++|++.... ...+.+.+|+.+++.++||||+++++++..++..++||||+++|+|.++
T Consensus 12 G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~ 91 (330)
T cd05601 12 GHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISNSPWIPQLQYAFQDKDNLYLVMEYQPGGDLLSL 91 (330)
T ss_pred ccCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceeeEEecCCeEEEEECCCCCCCHHHH
Confidence 89999999887 56667777775433 2456788899999999999999999999999999999999999999999
Q ss_pred hccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCCC-----ccccCccC
Q 014478 76 LFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGK-----SYSTNLAF 150 (424)
Q Consensus 76 l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~~-----~~~gt~~y 150 (424)
+.. ....+++..+..++.|++.||.|||+++ |+||||||+|||++.++.+||+|||++....... ...||+.|
T Consensus 92 l~~-~~~~l~~~~~~~~~~qi~~aL~~lH~~~-i~H~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~gt~~y 169 (330)
T cd05601 92 LNR-YEDQFDEDMAQFYLAELVLAIHSVHQMG-YVHRDIKPENVLIDRTGHIKLADFGSAARLTANKMVNSKLPVGTPDY 169 (330)
T ss_pred HHH-hcCCCCHHHHHHHHHHHHHHHHHHHHCC-eEcccCchHheEECCCCCEEeccCCCCeECCCCCceeeecccCCccc
Confidence 965 2357999999999999999999999999 9999999999999999999999999997654332 23689999
Q ss_pred CCccccc------cCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhcc--cCCCCCchhHHHHHHHHH
Q 014478 151 TPPEYMR------TGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSA--LEGHFSNDEGTELVRLAS 222 (424)
Q Consensus 151 ~aPE~~~------~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~li~ 222 (424)
+|||++. ...++.++|||||||++|+|++|..||........ ...+.... ...+....++.++.+++.
T Consensus 170 ~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~----~~~i~~~~~~~~~~~~~~~~~~~~~li~ 245 (330)
T cd05601 170 IAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHEGTSAKT----YNNIMNFQRFLKFPEDPKVSSDFLDLIQ 245 (330)
T ss_pred cCHHHhccccccccCCCCCcceeecccceeeeeccCCCCCCCCCHHHH----HHHHHcCCCccCCCCCCCCCHHHHHHHH
Confidence 9999987 34578899999999999999999988865422111 11111111 111122346788999999
Q ss_pred HhcccCcCCCCCHHHHHHH
Q 014478 223 RCLQSEARERPNAKSLVIS 241 (424)
Q Consensus 223 ~cl~~dp~~Rps~~~~~~~ 241 (424)
+||. +|.+|||+.+++.+
T Consensus 246 ~ll~-~p~~R~t~~~l~~h 263 (330)
T cd05601 246 SLLC-GQKERLGYEGLCCH 263 (330)
T ss_pred HHcc-ChhhCCCHHHHhCC
Confidence 9998 99999999999865
|
Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor |
| >cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-39 Score=307.10 Aligned_cols=229 Identities=20% Similarity=0.204 Sum_probs=183.8
Q ss_pred CCCcccceeee--ecceecccccCCCc----hhhhHHHHHH-HHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHh
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESSD----LGETLNLEEA-KAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAK 74 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~~----~~~~~~~~E~-~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~ 74 (424)
|+||.||.+.+ .+..+++|++.... .....+..|. .+++.++||||+++++++...+..++||||++||+|.+
T Consensus 6 G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~ 85 (325)
T cd05602 6 GSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYINGGELFY 85 (325)
T ss_pred CCCeEEEEEEECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCceeEEEEcCCeEEEEEeCCCCCcHHH
Confidence 89999999988 34557777765432 1223444444 45678899999999999999999999999999999999
Q ss_pred HhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCC----CCccccCccC
Q 014478 75 HLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRD----GKSYSTNLAF 150 (424)
Q Consensus 75 ~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~----~~~~~gt~~y 150 (424)
++.. ...+++..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++.... .....||+.|
T Consensus 86 ~~~~--~~~~~~~~~~~~~~qi~~~L~~lH~~g-iiHrDlkp~Nili~~~~~~kl~DfG~a~~~~~~~~~~~~~~gt~~y 162 (325)
T cd05602 86 HLQR--ERCFLEPRARFYAAEIASALGYLHSLN-IVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNGTTSTFCGTPEY 162 (325)
T ss_pred HHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC-eEecCCCHHHeEECCCCCEEEccCCCCcccccCCCCcccccCCccc
Confidence 9864 456889999999999999999999999 99999999999999999999999999875332 2345689999
Q ss_pred CCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHHHHHHHHHhcccCcC
Q 014478 151 TPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEAR 230 (424)
Q Consensus 151 ~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~ 230 (424)
+|||++.+..++.++|||||||++|+|++|..||........ ....... ....+..++..+.+++.+||+.||.
T Consensus 163 ~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~----~~~i~~~--~~~~~~~~~~~~~~li~~~l~~~p~ 236 (325)
T cd05602 163 LAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEM----YDNILNK--PLQLKPNITNSARHLLEGLLQKDRT 236 (325)
T ss_pred cCHHHHcCCCCCCccccccccHHHHHHhcCCCCCCCCCHHHH----HHHHHhC--CcCCCCCCCHHHHHHHHHHcccCHH
Confidence 999999988899999999999999999999988875422211 1111111 1233456788999999999999999
Q ss_pred CCCCHHHHH
Q 014478 231 ERPNAKSLV 239 (424)
Q Consensus 231 ~Rps~~~~~ 239 (424)
+||++.+.+
T Consensus 237 ~R~~~~~~~ 245 (325)
T cd05602 237 KRLGAKDDF 245 (325)
T ss_pred HCCCCCCCH
Confidence 999887433
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt |
| >cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-39 Score=306.74 Aligned_cols=236 Identities=14% Similarity=0.211 Sum_probs=188.9
Q ss_pred CCCcccceeee--ecceecccccCCCc----hhhhHHHHHHHHHhcC-CCcCcceeEEEEEeCCeeeEEEecCCCCCHHh
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESSD----LGETLNLEEAKAVGNL-RSERLANLIGCCYEADERLLVAEFMPNETLAK 74 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~~----~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~ 74 (424)
|+||.||.+.. .+..+++|++.... ...+.+.+|+.++.++ +||||+++++++...+..++||||++||+|..
T Consensus 6 G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~ 85 (327)
T cd05617 6 GSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQTTSRLFLVIEYVNGGDLMF 85 (327)
T ss_pred CCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEeCCEEEEEEeCCCCCcHHH
Confidence 89999999887 45567777775432 3345678899999888 69999999999999999999999999999999
Q ss_pred HhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCC----CCccccCccC
Q 014478 75 HLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRD----GKSYSTNLAF 150 (424)
Q Consensus 75 ~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~----~~~~~gt~~y 150 (424)
++.. ...+++..+..++.||+.||.|||+++ ++||||||+|||++.++.+||+|||+++.... .....||+.|
T Consensus 86 ~~~~--~~~l~~~~~~~~~~qi~~al~~lH~~~-ivHrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y 162 (327)
T cd05617 86 HMQR--QRKLPEEHARFYAAEICIALNFLHERG-IIYRDLKLDNVLLDADGHIKLTDYGMCKEGLGPGDTTSTFCGTPNY 162 (327)
T ss_pred HHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-eeccCCCHHHEEEeCCCCEEEeccccceeccCCCCceecccCCccc
Confidence 8864 457999999999999999999999999 99999999999999999999999999875321 2335689999
Q ss_pred CCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHH-Hhh-hhhhHhhhcccCCCCCchhHHHHHHHHHHhcccC
Q 014478 151 TPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDL-IRS-KNFLLLMDSALEGHFSNDEGTELVRLASRCLQSE 228 (424)
Q Consensus 151 ~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~d 228 (424)
+|||++.+..++.++|||||||++|+|++|..||....... ... ........ ......|..++..+.+++.+||..|
T Consensus 163 ~aPE~~~~~~~~~~~DiwslGvil~ell~g~~pf~~~~~~~~~~~~~~~~~~~~-~~~~~~p~~~~~~~~~li~~~L~~d 241 (327)
T cd05617 163 IAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIITDNPDMNTEDYLFQVIL-EKPIRIPRFLSVKASHVLKGFLNKD 241 (327)
T ss_pred CCHHHHCCCCCCchheeehhHHHHHHHHhCCCCCCccCCCcccccHHHHHHHHH-hCCCCCCCCCCHHHHHHHHHHhccC
Confidence 99999998899999999999999999999998885321100 000 01111111 1122356667889999999999999
Q ss_pred cCCCCCH------HHHHHH
Q 014478 229 ARERPNA------KSLVIS 241 (424)
Q Consensus 229 p~~Rps~------~~~~~~ 241 (424)
|.+|+++ .+++.+
T Consensus 242 P~~R~~~~~~~~~~~i~~h 260 (327)
T cd05617 242 PKERLGCQPQTGFSDIKSH 260 (327)
T ss_pred HHHcCCCCCCCCHHHHHcC
Confidence 9999985 466544
|
Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways |
| >cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.9e-39 Score=290.86 Aligned_cols=235 Identities=21% Similarity=0.298 Sum_probs=191.0
Q ss_pred CCCcccceeee-ecceecccccCCCc--hhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHhHhcc
Q 014478 2 GGRCSKFSICW-FHCHLKSSVLESSD--LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFH 78 (424)
Q Consensus 2 G~~g~v~~~~~-~~~~v~~~~~~~~~--~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~ 78 (424)
||+|.||.+.. .+..+++|++.... .....|.+|+++++.++||||+++++++...+..++||||+++++|.+++..
T Consensus 6 g~~g~vy~~~~~~~~~~a~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~ 85 (250)
T cd05085 6 GNFGEVFKGTLKDKTPVAVKTCKEDLPQELKIKFLSEARILKQYDHPNIVKLIGVCTQRQPIYIVMELVPGGDFLSFLRK 85 (250)
T ss_pred CCCceEEEEEecCCcEEEEEecCCcCCHHHHHHHHHHHHHHHhCCCCCcCeEEEEEecCCccEEEEECCCCCcHHHHHHh
Confidence 89999999875 34556666654332 3345788999999999999999999999999899999999999999999864
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCCC-----ccccCccCCCc
Q 014478 79 WETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGK-----SYSTNLAFTPP 153 (424)
Q Consensus 79 ~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~~-----~~~gt~~y~aP 153 (424)
....+++.+++.++.|++.+|.|||+++ ++||||||+||+++.++.+||+|||++....... ...++..|+||
T Consensus 86 -~~~~~~~~~~~~~~~~i~~~l~~lH~~~-~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~y~aP 163 (250)
T cd05085 86 -KKDELKTKQLVKFALDAAAGMAYLESKN-CIHRDLAARNCLVGENNVLKISDFGMSRQEDDGIYSSSGLKQIPIKWTAP 163 (250)
T ss_pred -cCCCCCHHHHHHHHHHHHHHHHHHHhCC-eeecccChheEEEcCCCeEEECCCccceeccccccccCCCCCCcccccCH
Confidence 2456899999999999999999999999 9999999999999999999999999987544321 12335679999
Q ss_pred cccccCCCCCCcceehhHHHHHHHhh-CCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHHHHHHHHHhcccCcCCC
Q 014478 154 EYMRTGRVTPESVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARER 232 (424)
Q Consensus 154 E~~~~~~~~~~~Dv~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~R 232 (424)
|++.++.++.++||||||+++|++++ |..||....... .............+..++..+.+++.+||..+|++|
T Consensus 164 E~~~~~~~~~~~Di~slG~ll~~~~~~g~~p~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R 238 (250)
T cd05085 164 EALNYGRYSSESDVWSYGILLWETFSLGVCPYPGMTNQQ-----AREQVEKGYRMSCPQKCPDDVYKVMQRCWDYKPENR 238 (250)
T ss_pred HHhccCCCCchhHHHHHHHHHHHHhcCCCCCCCCCCHHH-----HHHHHHcCCCCCCCCCCCHHHHHHHHHHcccCcccC
Confidence 99998889999999999999999998 887776542211 111122222334455678899999999999999999
Q ss_pred CCHHHHHHHHH
Q 014478 233 PNAKSLVISLM 243 (424)
Q Consensus 233 ps~~~~~~~l~ 243 (424)
||+.++++.|.
T Consensus 239 p~~~~l~~~l~ 249 (250)
T cd05085 239 PKFSELQKELA 249 (250)
T ss_pred CCHHHHHHHhc
Confidence 99999988763
|
Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c |
| >cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-39 Score=310.53 Aligned_cols=232 Identities=16% Similarity=0.181 Sum_probs=187.1
Q ss_pred CCCcccceeee--ecceecccccCCC----chhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHhH
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESS----DLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKH 75 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~----~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~ 75 (424)
|+||.||.+.+ .+..+++|++... ......+.+|+.+++.++||||+++++++.++...++||||++||+|.++
T Consensus 54 G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~~~lv~Ey~~gg~L~~~ 133 (370)
T cd05621 54 GAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQDDKYLYMVMEYMPGGDLVNL 133 (370)
T ss_pred cCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEEcCCCCCcHHHH
Confidence 89999999987 3556777766432 22345678899999999999999999999999999999999999999999
Q ss_pred hccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCC-----CccccCccC
Q 014478 76 LFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG-----KSYSTNLAF 150 (424)
Q Consensus 76 l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~-----~~~~gt~~y 150 (424)
+.. ..+++.++..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++..... ....||+.|
T Consensus 134 l~~---~~~~~~~~~~~~~qil~aL~~LH~~~-IvHrDLKp~NILl~~~~~~kL~DFG~a~~~~~~~~~~~~~~~gt~~Y 209 (370)
T cd05621 134 MSN---YDVPEKWAKFYTAEVVLALDAIHSMG-LIHRDVKPDNMLLDKHGHLKLADFGTCMKMDETGMVRCDTAVGTPDY 209 (370)
T ss_pred HHh---cCCCHHHHHHHHHHHHHHHHHHHHCC-eEecCCCHHHEEECCCCCEEEEecccceecccCCceecccCCCCccc
Confidence 953 46899999999999999999999999 999999999999999999999999999865432 245689999
Q ss_pred CCccccccC----CCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhcccCCCCC--chhHHHHHHHHHHh
Q 014478 151 TPPEYMRTG----RVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFS--NDEGTELVRLASRC 224 (424)
Q Consensus 151 ~aPE~~~~~----~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~~li~~c 224 (424)
||||++.+. .++.++|||||||++|+|++|..||...... .....+.........+ ..++..+.+++.+|
T Consensus 210 ~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell~G~~Pf~~~~~~----~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~~ 285 (370)
T cd05621 210 ISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSLV----GTYSKIMDHKNSLNFPEDVEISKHAKNLICAF 285 (370)
T ss_pred CCHHHHhccCCCCCCCcccCEEeehHHHHHHHhCCCCCCCCCHH----HHHHHHHhCCcccCCCCcccCCHHHHHHHHHH
Confidence 999998753 3788999999999999999999888764221 1122222222112222 24578899999999
Q ss_pred cccCcCC--CCCHHHHHHH
Q 014478 225 LQSEARE--RPNAKSLVIS 241 (424)
Q Consensus 225 l~~dp~~--Rps~~~~~~~ 241 (424)
|..++.+ |+++.+++++
T Consensus 286 L~~~~~r~~R~~~~e~l~h 304 (370)
T cd05621 286 LTDREVRLGRNGVEEIKQH 304 (370)
T ss_pred ccCchhccCCCCHHHHhcC
Confidence 9855543 8899999886
|
Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found |
| >cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-39 Score=307.87 Aligned_cols=236 Identities=18% Similarity=0.225 Sum_probs=183.2
Q ss_pred CCCcccceeee--ecceecccccCCC---chhhhHHHHHHHHHhcCCCcCcceeEEEEEeCC-----eeeEEEecCCCCC
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESS---DLGETLNLEEAKAVGNLRSERLANLIGCCYEAD-----ERLLVAEFMPNET 71 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~---~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-----~~~lv~e~~~~gs 71 (424)
|++|.||.+.. .+..+++|++... ......+.+|+++++.++||||+++++++.... ..++||||+. ++
T Consensus 11 G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~lv~e~~~-~~ 89 (338)
T cd07859 11 GSYGVVCSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDIYVVFELME-SD 89 (338)
T ss_pred cCCeEEEEEEECCCCCEEEEEEechhhccchhHHHHHHHHHHHHhCCCCCEeeecceEeccCCCCCceEEEEEecCC-CC
Confidence 89999999987 4667888776532 223457889999999999999999999986432 4799999995 69
Q ss_pred HHhHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCC-------Ccc
Q 014478 72 LAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG-------KSY 144 (424)
Q Consensus 72 L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~-------~~~ 144 (424)
|.+++.. ...+++..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++..... ...
T Consensus 90 L~~~l~~--~~~~~~~~~~~i~~qi~~aL~~LH~~~-ivH~dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~ 166 (338)
T cd07859 90 LHQVIKA--NDDLTPEHHQFFLYQLLRALKYIHTAN-VFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDY 166 (338)
T ss_pred HHHHHHh--cccCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCCHHHeEECCCCcEEEccCccccccccccCccccccCC
Confidence 9998864 456899999999999999999999999 999999999999999999999999998754321 234
Q ss_pred ccCccCCCcccccc--CCCCCCcceehhHHHHHHHhhCCCCCCchhhHHH-------------------hhhhhhHhh--
Q 014478 145 STNLAFTPPEYMRT--GRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLI-------------------RSKNFLLLM-- 201 (424)
Q Consensus 145 ~gt~~y~aPE~~~~--~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~-------------------~~~~~~~~~-- 201 (424)
.||..|+|||++.+ ..++.++|||||||++|+|++|+.||+....... .........
T Consensus 167 ~~t~~y~aPE~~~~~~~~~~~~~DvwSlGvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 246 (338)
T cd07859 167 VATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLITDLLGTPSPETISRVRNEKARRYLSS 246 (338)
T ss_pred CCCCCcCCHHHHhccccccCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhhhhhHHHHHHh
Confidence 68999999999875 5789999999999999999999988865321100 000000000
Q ss_pred -hcccCCC---CCchhHHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 014478 202 -DSALEGH---FSNDEGTELVRLASRCLQSEARERPNAKSLVIS 241 (424)
Q Consensus 202 -~~~~~~~---~~~~~~~~l~~li~~cl~~dp~~Rps~~~~~~~ 241 (424)
....... .....++++.+++.+||+.||++|||+++++.+
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~e~l~h 290 (338)
T cd07859 247 MRKKQPVPFSQKFPNADPLALRLLERLLAFDPKDRPTAEEALAD 290 (338)
T ss_pred hcccCCCchHHhcCCCChHHHHHHHHHcCcCcccCCCHHHHhcC
Confidence 0000000 011346778999999999999999999999975
|
Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos |
| >cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-39 Score=295.48 Aligned_cols=236 Identities=19% Similarity=0.284 Sum_probs=190.7
Q ss_pred CCCcccceeeeec--------ceecccccCCCc--hhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCC
Q 014478 2 GGRCSKFSICWFH--------CHLKSSVLESSD--LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNET 71 (424)
Q Consensus 2 G~~g~v~~~~~~~--------~~v~~~~~~~~~--~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gs 71 (424)
|++|.||.+.+.. ..+++|.+.... .....+.+|+.+++.++||||+++++++......++||||+++++
T Consensus 6 g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~ 85 (269)
T cd05044 6 GAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATDQEKKEFLKEAHLMSNFNHPNIVKLLGVCLLNEPQYIIMELMEGGD 85 (269)
T ss_pred ccceeEEeeeecccccCcccceeehhhhhhcccchhhHHHHHHHHHHHHhcCCCCeeeEeeeecCCCCeEEEEeccCCCc
Confidence 8899999988743 346666654332 346688999999999999999999999999889999999999999
Q ss_pred HHhHhccC-----CCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCC-----CeEEccccccccCCCC
Q 014478 72 LAKHLFHW-----ETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDG-----NPRLSSFGLMKNSRDG 141 (424)
Q Consensus 72 L~~~l~~~-----~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~-----~~kl~Dfg~~~~~~~~ 141 (424)
|.+++... ....+++.++..++.|++.||.|||+++ ++|+||||+||+++.++ .++|+|||+++.....
T Consensus 86 L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~-i~H~dl~p~nil~~~~~~~~~~~~~l~dfg~~~~~~~~ 164 (269)
T cd05044 86 LLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQMH-FIHRDLAARNCLVSEKGYDADRVVKIGDFGLARDIYKS 164 (269)
T ss_pred HHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHhCC-cccCCCChheEEEecCCCCCCcceEECCcccccccccc
Confidence 99998642 1234788999999999999999999999 99999999999998877 8999999998755322
Q ss_pred ------CccccCccCCCccccccCCCCCCcceehhHHHHHHHhh-CCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhH
Q 014478 142 ------KSYSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEG 214 (424)
Q Consensus 142 ------~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (424)
....++..|+|||.+.++.++.++|||||||++|+|++ |..||+..... .....+........+..++
T Consensus 165 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~ellt~g~~p~~~~~~~-----~~~~~~~~~~~~~~~~~~~ 239 (269)
T cd05044 165 DYYRKEGEGLLPVRWMAPESLLDGKFTTQSDVWSFGVLMWEILTLGQQPYPALNNQ-----EVLQHVTAGGRLQKPENCP 239 (269)
T ss_pred cccccCcccCCCccccCHHHHccCCcccchhHHHHHHHHHHHHHcCCCCCcccCHH-----HHHHHHhcCCccCCcccch
Confidence 12234678999999998889999999999999999998 88777643211 1111222222233455678
Q ss_pred HHHHHHHHHhcccCcCCCCCHHHHHHHHH
Q 014478 215 TELVRLASRCLQSEARERPNAKSLVISLM 243 (424)
Q Consensus 215 ~~l~~li~~cl~~dp~~Rps~~~~~~~l~ 243 (424)
..+.+++.+||..+|++||++.++++.|+
T Consensus 240 ~~~~~li~~~l~~~p~~Rp~~~~i~~~l~ 268 (269)
T cd05044 240 DKIYQLMTNCWAQDPSERPTFDRIQEILQ 268 (269)
T ss_pred HHHHHHHHHHcCCCcccCCCHHHHHHHHh
Confidence 89999999999999999999999998875
|
Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male |
| >cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-39 Score=305.99 Aligned_cols=231 Identities=18% Similarity=0.259 Sum_probs=188.0
Q ss_pred CCCcccceeeee--cceecccccCCC----chhhhHHHHHHHHHhcCCCc-CcceeEEEEEeCCeeeEEEecCCCCCHHh
Q 014478 2 GGRCSKFSICWF--HCHLKSSVLESS----DLGETLNLEEAKAVGNLRSE-RLANLIGCCYEADERLLVAEFMPNETLAK 74 (424)
Q Consensus 2 G~~g~v~~~~~~--~~~v~~~~~~~~----~~~~~~~~~E~~~l~~l~h~-~iv~~~~~~~~~~~~~lv~e~~~~gsL~~ 74 (424)
|++|.||.+.+. +..+++|++... ....+.+..|.+++..+.|+ +|+++++++...+..++||||++||+|.+
T Consensus 11 G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~~g~L~~ 90 (324)
T cd05587 11 GSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMY 90 (324)
T ss_pred ccCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEEcCCEEEEEEcCCCCCcHHH
Confidence 899999999884 446787877543 23456788899999999764 58889999999999999999999999999
Q ss_pred HhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCC----CCccccCccC
Q 014478 75 HLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRD----GKSYSTNLAF 150 (424)
Q Consensus 75 ~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~----~~~~~gt~~y 150 (424)
++.. ...+++.++..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++.... .....||+.|
T Consensus 91 ~~~~--~~~~~~~~~~~~~~qi~~al~~lH~~~-ivH~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~gt~~y 167 (324)
T cd05587 91 HIQQ--VGKFKEPHAVFYAAEIAIGLFFLHSKG-IIYRDLKLDNVMLDAEGHIKIADFGMCKENIFGGKTTRTFCGTPDY 167 (324)
T ss_pred HHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-eEecCCCHHHeEEcCCCCEEEeecCcceecCCCCCceeeecCCccc
Confidence 9864 456899999999999999999999999 99999999999999999999999999875321 1234689999
Q ss_pred CCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHHHHHHHHHhcccCcC
Q 014478 151 TPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEAR 230 (424)
Q Consensus 151 ~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~ 230 (424)
+|||++.+..++.++|||||||++|+|++|+.||........ ...+.. .....+..+++++.+++.+||..||.
T Consensus 168 ~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~~~----~~~i~~--~~~~~~~~~~~~~~~li~~~l~~~P~ 241 (324)
T cd05587 168 IAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDEL----FQSIME--HNVSYPKSLSKEAVSICKGLLTKHPA 241 (324)
T ss_pred cChhhhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHH----HHHHHc--CCCCCCCCCCHHHHHHHHHHhhcCHH
Confidence 999999988899999999999999999999988865422111 111111 12234556788999999999999999
Q ss_pred CCCCH-----HHHHHH
Q 014478 231 ERPNA-----KSLVIS 241 (424)
Q Consensus 231 ~Rps~-----~~~~~~ 241 (424)
+|++. .+++++
T Consensus 242 ~R~~~~~~~~~~~~~h 257 (324)
T cd05587 242 KRLGCGPTGERDIREH 257 (324)
T ss_pred HcCCCCCCCHHHHhcC
Confidence 99976 555544
|
Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory |
| >cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-39 Score=300.54 Aligned_cols=238 Identities=19% Similarity=0.265 Sum_probs=192.6
Q ss_pred CCCcccceeee--ecceecccccCCCc----hhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHhH
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESSD----LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKH 75 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~~----~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~ 75 (424)
|++|.||.+.+ .+..+++|.+.... .....+.+|+.++++++|+||+.+++.+..++..++||||++|++|.++
T Consensus 11 G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~g~~L~~~ 90 (285)
T cd05630 11 GGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFH 90 (285)
T ss_pred CCCeEEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHhCCCCCeeeeeEEEecCCEEEEEEEecCCCcHHHH
Confidence 89999999888 45567777664432 2234677899999999999999999999999999999999999999998
Q ss_pred hccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCCC---ccccCccCCC
Q 014478 76 LFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGK---SYSTNLAFTP 152 (424)
Q Consensus 76 l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~~---~~~gt~~y~a 152 (424)
+.......+++.++..++.|++.||.|||+.+ ++||||||+||+++.++.++|+|||++....... ...|+..|+|
T Consensus 91 l~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~-iiH~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~~g~~~y~a 169 (285)
T cd05630 91 IYHMGEAGFEEGRAVFYAAEICCGLEDLHQER-IVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKGRVGTVGYMA 169 (285)
T ss_pred HHHhcccCCCHHHHHHHHHHHHHHHHHHHhCC-EEeCCCCHHHEEECCCCCEEEeeccceeecCCCccccCCCCCccccC
Confidence 86544457999999999999999999999999 9999999999999999999999999987654332 3468899999
Q ss_pred ccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHHHHHHHHHhcccCcCCC
Q 014478 153 PEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARER 232 (424)
Q Consensus 153 PE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~R 232 (424)
||++.+..++.++|||||||++|+|++|..||........ ......... ......+..+++++.+++.+||+.||++|
T Consensus 170 PE~~~~~~~~~~~DiwslG~~l~~l~~g~~Pf~~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~li~~~l~~~p~~R 247 (285)
T cd05630 170 PEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIK-REEVERLVK-EVQEEYSEKFSPDARSLCKMLLCKDPKER 247 (285)
T ss_pred hHHHcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCccch-HHHHHhhhh-hhhhhcCccCCHHHHHHHHHHhhcCHHHc
Confidence 9999988899999999999999999999988865311100 011111111 11223445667889999999999999999
Q ss_pred CC-----HHHHHHHH
Q 014478 233 PN-----AKSLVISL 242 (424)
Q Consensus 233 ps-----~~~~~~~l 242 (424)
|| +++++++-
T Consensus 248 ~s~~~~~~~~~~~h~ 262 (285)
T cd05630 248 LGCQGGGAREVKEHP 262 (285)
T ss_pred cCCCCCchHHHHcCh
Confidence 99 88998753
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as |
| >cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-39 Score=296.02 Aligned_cols=235 Identities=13% Similarity=0.177 Sum_probs=189.2
Q ss_pred CCCcccceeee--ecceecccccCCCchhhhHHHHHHHHHhcC-CCcCcceeEEEEEeC------CeeeEEEecCCCCCH
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESSDLGETLNLEEAKAVGNL-RSERLANLIGCCYEA------DERLLVAEFMPNETL 72 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~------~~~~lv~e~~~~gsL 72 (424)
|++|.||.+.+ .+..+++|++.........+.+|+.++.++ +||||+++++++... ...+++|||+++++|
T Consensus 17 g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~L 96 (272)
T cd06637 17 GTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSV 96 (272)
T ss_pred cCCeEEEEEEEcCCCcEEEEEEEEcCCccHHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCCCCCcEEEEEEEcCCCCcH
Confidence 78999999987 456677777766655667888999999999 799999999998753 357899999999999
Q ss_pred HhHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCC----CccccCc
Q 014478 73 AKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG----KSYSTNL 148 (424)
Q Consensus 73 ~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~----~~~~gt~ 148 (424)
.+++.......+++..+..++.|++.||.|||+++ ++||||||+||+++.++.++|+|||++...... ....|+.
T Consensus 97 ~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~-ivh~dl~~~nili~~~~~~~l~Dfg~~~~~~~~~~~~~~~~g~~ 175 (272)
T cd06637 97 TDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHK-VIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRRNTFIGTP 175 (272)
T ss_pred HHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCC-CccCCCCHHHEEECCCCCEEEccCCCceecccccccCCcccccc
Confidence 99987644567899999999999999999999999 999999999999999999999999998765322 3356789
Q ss_pred cCCCcccccc-----CCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHHHHHHHHH
Q 014478 149 AFTPPEYMRT-----GRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASR 223 (424)
Q Consensus 149 ~y~aPE~~~~-----~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 223 (424)
.|+|||++.+ ..++.++|||||||++|||++|..||..... ................+..++.++.+++.+
T Consensus 176 ~y~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el~~g~~p~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ 251 (272)
T cd06637 176 YWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHP----MRALFLIPRNPAPRLKSKKWSKKFQSFIES 251 (272)
T ss_pred cccCHhHhccccCcCCCCCchhhHHHHHHHHHHHHhCCCCccccCH----HHHHHHHhcCCCCCCCCCCcCHHHHHHHHH
Confidence 9999999862 3578899999999999999999987753211 111111111112222334567789999999
Q ss_pred hcccCcCCCCCHHHHHHH
Q 014478 224 CLQSEARERPNAKSLVIS 241 (424)
Q Consensus 224 cl~~dp~~Rps~~~~~~~ 241 (424)
||..||.+|||+.+++.+
T Consensus 252 ~l~~~p~~Rpt~~~il~~ 269 (272)
T cd06637 252 CLVKNHSQRPTTEQLMKH 269 (272)
T ss_pred HcCCChhhCCCHHHHhhC
Confidence 999999999999999864
|
Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ |
| >cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.3e-39 Score=291.85 Aligned_cols=236 Identities=19% Similarity=0.302 Sum_probs=192.6
Q ss_pred CCCcccceeee-ecceecccccCCCchhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHhHhccCC
Q 014478 2 GGRCSKFSICW-FHCHLKSSVLESSDLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWE 80 (424)
Q Consensus 2 G~~g~v~~~~~-~~~~v~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~ 80 (424)
|++|.||.+.+ .+..+++|.+.......+.|.+|+++++.++|+||+++++++.. ...+++|||+++++|.+++....
T Consensus 17 g~~~~vy~~~~~~~~~~~iK~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~~~~~v~e~~~~~~L~~~~~~~~ 95 (260)
T cd05073 17 GQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVKLHAVVTK-EPIYIITEFMAKGSLLDFLKSDE 95 (260)
T ss_pred ccceEEEEEEecCCccEEEEecCCChhHHHHHHHHHHHHHhcCCCCcceEEEEEcC-CCeEEEEEeCCCCcHHHHHHhCC
Confidence 88999999876 34556777666655566789999999999999999999999887 67899999999999999997644
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCCC-----ccccCccCCCccc
Q 014478 81 TQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGK-----SYSTNLAFTPPEY 155 (424)
Q Consensus 81 ~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~~-----~~~gt~~y~aPE~ 155 (424)
...+++.++..++.|++.||.|||+.+ ++||||||+||+++.++.+||+|||.+....... ...++..|+|||+
T Consensus 96 ~~~~~~~~~~~~~~~l~~aL~~lH~~~-i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~y~~PE~ 174 (260)
T cd05073 96 GSKQPLPKLIDFSAQIAEGMAFIEQRN-YIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEA 174 (260)
T ss_pred ccccCHHHHHHHHHHHHHHHHHHHhCC-ccccccCcceEEEcCCCcEEECCCcceeeccCCCcccccCCcccccccCHhH
Confidence 556889999999999999999999999 9999999999999999999999999987654322 1234567999999
Q ss_pred cccCCCCCCcceehhHHHHHHHhh-CCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHHHHHHHHHhcccCcCCCCC
Q 014478 156 MRTGRVTPESVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERPN 234 (424)
Q Consensus 156 ~~~~~~~~~~Dv~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps 234 (424)
+..+.++.++|+|||||++|++++ |..||+...... .............+...+.++.+++.+||+.+|++||+
T Consensus 175 ~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~ 249 (260)
T cd05073 175 INFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPE-----VIRALERGYRMPRPENCPEELYNIMMRCWKNRPEERPT 249 (260)
T ss_pred hccCCcCccccchHHHHHHHHHHhcCCCCCCCCCHHH-----HHHHHhCCCCCCCcccCCHHHHHHHHHHcccCcccCcC
Confidence 998889999999999999999998 787776532111 11111122222334456788999999999999999999
Q ss_pred HHHHHHHHHH
Q 014478 235 AKSLVISLMS 244 (424)
Q Consensus 235 ~~~~~~~l~~ 244 (424)
+.+++..|+.
T Consensus 250 ~~~l~~~L~~ 259 (260)
T cd05073 250 FEYIQSVLDD 259 (260)
T ss_pred HHHHHHHHhc
Confidence 9999988864
|
Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa |
| >cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.3e-39 Score=293.45 Aligned_cols=237 Identities=20% Similarity=0.254 Sum_probs=192.6
Q ss_pred CCCcccceeeee--c---ceecccccCCC--chhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHh
Q 014478 2 GGRCSKFSICWF--H---CHLKSSVLESS--DLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAK 74 (424)
Q Consensus 2 G~~g~v~~~~~~--~---~~v~~~~~~~~--~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~ 74 (424)
|++|.||++... + ..+++|++... ......+..|+++++.++||||+++++++...+..++||||+++++|.+
T Consensus 16 g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~ 95 (268)
T cd05063 16 GEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQRQDFLSEASIMGQFSHHNIIRLEGVVTKFKPAMIITEYMENGALDK 95 (268)
T ss_pred CCCccEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCCCeeEEEEEEccCCCcEEEEEcCCCCCHHH
Confidence 889999999873 2 24666666443 2345678899999999999999999999999999999999999999999
Q ss_pred HhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCCCc-------cccC
Q 014478 75 HLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKS-------YSTN 147 (424)
Q Consensus 75 ~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~~~-------~~gt 147 (424)
++.. ....+++.++..++.|++.||.|||+.+ ++||||||+||+++.++.+||+|||++........ ...+
T Consensus 96 ~~~~-~~~~~~~~~~~~~~~~l~~al~~lH~~~-i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~ 173 (268)
T cd05063 96 YLRD-HDGEFSSYQLVGMLRGIAAGMKYLSDMN-YVHRDLAARNILVNSNLECKVSDFGLSRVLEDDPEGTYTTSGGKIP 173 (268)
T ss_pred HHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCC-eeccccchhhEEEcCCCcEEECCCccceecccccccceeccCCCcC
Confidence 9865 2457899999999999999999999999 99999999999999999999999999876543211 1124
Q ss_pred ccCCCccccccCCCCCCcceehhHHHHHHHhh-CCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHHHHHHHHHhcc
Q 014478 148 LAFTPPEYMRTGRVTPESVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQ 226 (424)
Q Consensus 148 ~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~ 226 (424)
..|+|||++.+..++.++|||||||++|||++ |..|+...... .....+......+.+..++.++.+++.+||.
T Consensus 174 ~~y~~PE~~~~~~~~~~~Dv~slG~il~ell~~g~~p~~~~~~~-----~~~~~i~~~~~~~~~~~~~~~~~~li~~c~~ 248 (268)
T cd05063 174 IRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSFGERPYWDMSNH-----EVMKAINDGFRLPAPMDCPSAVYQLMLQCWQ 248 (268)
T ss_pred ceecCHHHhhcCCcChHhHHHHHHHHHHHHHhCCCCCCCcCCHH-----HHHHHHhcCCCCCCCCCCCHHHHHHHHHHcC
Confidence 57999999998889999999999999999997 88777543211 1222222222333445678899999999999
Q ss_pred cCcCCCCCHHHHHHHHHHH
Q 014478 227 SEARERPNAKSLVISLMSL 245 (424)
Q Consensus 227 ~dp~~Rps~~~~~~~l~~~ 245 (424)
.+|++||++.++++.|.++
T Consensus 249 ~~p~~Rp~~~~i~~~l~~~ 267 (268)
T cd05063 249 QDRARRPRFVDIVNLLDKL 267 (268)
T ss_pred CCcccCcCHHHHHHHHHhh
Confidence 9999999999999998765
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored |
| >cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.5e-39 Score=293.61 Aligned_cols=240 Identities=20% Similarity=0.172 Sum_probs=182.2
Q ss_pred CCCcccceeeeec----ceecccccCCCc--hhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHhH
Q 014478 2 GGRCSKFSICWFH----CHLKSSVLESSD--LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKH 75 (424)
Q Consensus 2 G~~g~v~~~~~~~----~~v~~~~~~~~~--~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~ 75 (424)
|+||.||.+.+.+ ..+++|.+.... .....+.+|+.++++++||||+++++++.+....++||||+++|+|.++
T Consensus 6 G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~ 85 (269)
T cd05087 6 GWFGKVILGEVNSGYTPAQVVVKELRVSASVQEQMKFLEEAQPYRSLQHSNLLQCLGQCTEVTPYLLVMEFCPLGDLKGY 85 (269)
T ss_pred cCCceEEEEEEcCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCCcEEEEECCCCCcHHHH
Confidence 8999999998743 345566554332 3345788999999999999999999999988889999999999999999
Q ss_pred hccCC---CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCC------Ccccc
Q 014478 76 LFHWE---TQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG------KSYST 146 (424)
Q Consensus 76 l~~~~---~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~------~~~~g 146 (424)
+.... ....++..+..++.|++.||.|||+++ ++||||||+||+++.++.+||+|||+++..... ....+
T Consensus 86 l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~-i~H~dlkp~nil~~~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~ 164 (269)
T cd05087 86 LRSCRKAELMTPDPTTLQRMACEIALGLLHLHKNN-FIHSDLALRNCLLTADLTVKIGDYGLSHNKYKEDYYVTPDQLWV 164 (269)
T ss_pred HHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCC-EeccccCcceEEEcCCCcEEECCccccccccCcceeecCCCcCC
Confidence 86421 224567788899999999999999999 999999999999999999999999998754322 12345
Q ss_pred CccCCCccccccC-------CCCCCcceehhHHHHHHHhh-CCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHHHH
Q 014478 147 NLAFTPPEYMRTG-------RVTPESVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELV 218 (424)
Q Consensus 147 t~~y~aPE~~~~~-------~~~~~~Dv~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 218 (424)
+..|+|||++.+. .++.++|+||||+++|||++ |..||+............................+..+.
T Consensus 165 ~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (269)
T cd05087 165 PLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELFELGSQPYRHLSDEQVLTYTVREQQLKLPKPRLKLPLSDRWY 244 (269)
T ss_pred cccccCHhHhccccccccccCCCccchhHHHHHHHHHHHhCCCCCCCCCChHHHHHHHhhcccCCCCCCccCCCCChHHH
Confidence 7789999998642 35789999999999999996 887776532111111111100011111122234567899
Q ss_pred HHHHHhcccCcCCCCCHHHHHHHHH
Q 014478 219 RLASRCLQSEARERPNAKSLVISLM 243 (424)
Q Consensus 219 ~li~~cl~~dp~~Rps~~~~~~~l~ 243 (424)
+++.+|| .+|++|||+++|+..|+
T Consensus 245 ~l~~~c~-~~P~~Rpt~~~l~~~l~ 268 (269)
T cd05087 245 EVMQFCW-LQPEQRPSAEEVHLLLS 268 (269)
T ss_pred HHHHHHh-cCcccCCCHHHHHHHhc
Confidence 9999999 68999999999997763
|
Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells |
| >cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.3e-39 Score=294.07 Aligned_cols=241 Identities=14% Similarity=0.174 Sum_probs=194.4
Q ss_pred CCCcccceeee--ecceecccccCCC----chhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHhH
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESS----DLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKH 75 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~----~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~ 75 (424)
|++|.||.+.+ .+..+++|.+... ......+.+|+.+++.++||||+++++++..++..+++|||+++++|.++
T Consensus 13 g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~ 92 (267)
T cd08229 13 GQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVLELADAGDLSRM 92 (267)
T ss_pred cCCeEEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHccCCchhhhhheeEeCCeEEEEEEecCCCCHHHH
Confidence 78999999986 5666777765432 22346788999999999999999999999999999999999999999998
Q ss_pred hccC--CCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCCC----ccccCcc
Q 014478 76 LFHW--ETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGK----SYSTNLA 149 (424)
Q Consensus 76 l~~~--~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~~----~~~gt~~ 149 (424)
+... ....+++.+++.++.|++.||.|||+++ ++|+||||+||+++.++.++|+|||++....... ...++..
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~-i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~ 171 (267)
T cd08229 93 IKHFKKQKRLIPEKTVWKYFVQLCSALEHMHSRR-VMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSLVGTPY 171 (267)
T ss_pred HHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCCHHHEEEcCCCCEEECcchhhhccccCCcccccccCCcC
Confidence 8532 2456899999999999999999999999 9999999999999999999999999987654322 3467889
Q ss_pred CCCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHHHHHHHHHhcccCc
Q 014478 150 FTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEA 229 (424)
Q Consensus 150 y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp 229 (424)
|+|||++.+..++.++|+||||+++|+|++|..||........... ............+...++++.+++.+||..||
T Consensus 172 ~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p 249 (267)
T cd08229 172 YMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLC--KKIEQCDYPPLPSDHYSEELRQLVNMCINPDP 249 (267)
T ss_pred ccCHHHhcCCCccchhhHHHHHHHHHHHHhCCCCcccccchHHHHh--hhhhcCCCCCCCcccccHHHHHHHHHhcCCCc
Confidence 9999999888899999999999999999999988764321111110 11111111112233567899999999999999
Q ss_pred CCCCCHHHHHHHHHHH
Q 014478 230 RERPNAKSLVISLMSL 245 (424)
Q Consensus 230 ~~Rps~~~~~~~l~~~ 245 (424)
++|||+.+|++.+.++
T Consensus 250 ~~Rpt~~~i~~~~~~~ 265 (267)
T cd08229 250 EKRPDITYVYDVAKRM 265 (267)
T ss_pred ccCCCHHHHHHHHhhh
Confidence 9999999999988765
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase. |
| >cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-38 Score=301.23 Aligned_cols=241 Identities=19% Similarity=0.294 Sum_probs=194.2
Q ss_pred CCCcccceeeeec---------ceecccccCCC--chhhhHHHHHHHHHhcC-CCcCcceeEEEEEeCCeeeEEEecCCC
Q 014478 2 GGRCSKFSICWFH---------CHLKSSVLESS--DLGETLNLEEAKAVGNL-RSERLANLIGCCYEADERLLVAEFMPN 69 (424)
Q Consensus 2 G~~g~v~~~~~~~---------~~v~~~~~~~~--~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~~~~ 69 (424)
||||.||.+.+.+ ..+++|++... ....+.+.+|+++++++ +||||++++++|..+...+++|||+++
T Consensus 23 G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~ 102 (334)
T cd05100 23 GCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDATDKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVLVEYASK 102 (334)
T ss_pred ccCCcEEEEEEeccCCccCCcceeEEEEEcccccCHHHHHHHHHHHHHHHhhcCCCCeeeeeEEEccCCceEEEEecCCC
Confidence 8999999997643 13566655432 23456889999999999 899999999999999899999999999
Q ss_pred CCHHhHhccCC--------------CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEcccccc
Q 014478 70 ETLAKHLFHWE--------------TQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLM 135 (424)
Q Consensus 70 gsL~~~l~~~~--------------~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~ 135 (424)
|+|.+++.... ...+++.+++.++.|++.||.|||+++ ++||||||+||+++.++.+||+|||++
T Consensus 103 g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~g-ivH~dlkp~Nill~~~~~~kL~Dfg~~ 181 (334)
T cd05100 103 GNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLASQK-CIHRDLAARNVLVTEDNVMKIADFGLA 181 (334)
T ss_pred CcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCC-eeccccccceEEEcCCCcEEECCcccc
Confidence 99999986421 234788999999999999999999999 999999999999999999999999998
Q ss_pred ccCCCCC------ccccCccCCCccccccCCCCCCcceehhHHHHHHHhh-CCCCCCchhhHHHhhhhhhHhhhcccCCC
Q 014478 136 KNSRDGK------SYSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKNFLLLMDSALEGH 208 (424)
Q Consensus 136 ~~~~~~~------~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (424)
+...... ...++..|+|||++.+..++.++|||||||++|||++ |..|+...... .....+.......
T Consensus 182 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~-----~~~~~~~~~~~~~ 256 (334)
T cd05100 182 RDVHNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVE-----ELFKLLKEGHRMD 256 (334)
T ss_pred eecccccccccccCCCcCceEcCHHHhccCCcCchhhhHHHHHHHHHHHhcCCCCCCCCCHH-----HHHHHHHcCCCCC
Confidence 7654321 1223467999999998889999999999999999998 77666543211 1222222223334
Q ss_pred CCchhHHHHHHHHHHhcccCcCCCCCHHHHHHHHHHHhhh
Q 014478 209 FSNDEGTELVRLASRCLQSEARERPNAKSLVISLMSLQKE 248 (424)
Q Consensus 209 ~~~~~~~~l~~li~~cl~~dp~~Rps~~~~~~~l~~~~~~ 248 (424)
.+..++.++.+++.+||..+|++|||+.+++..|..+...
T Consensus 257 ~~~~~~~~l~~li~~cl~~~p~~Rps~~ell~~l~~~~~~ 296 (334)
T cd05100 257 KPANCTHELYMIMRECWHAVPSQRPTFKQLVEDLDRVLTV 296 (334)
T ss_pred CCCCCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHhhh
Confidence 4556778999999999999999999999999999988754
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-39 Score=297.78 Aligned_cols=237 Identities=19% Similarity=0.240 Sum_probs=192.1
Q ss_pred CCCcccceeee--ecceecccccCCCc----hhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHhH
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESSD----LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKH 75 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~~----~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~ 75 (424)
||||.||.+.+ .+..+++|.+.... .....+.+|+++++.++|+||+.+++.+..++..++||||+++++|.++
T Consensus 11 G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~ 90 (285)
T cd05632 11 GGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFVVNLAYAYETKDALCLVLTIMNGGDLKFH 90 (285)
T ss_pred CCCeEEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcCCcCceeEEEEEecCCEEEEEEEeccCccHHHH
Confidence 89999999888 45667777765432 2234577899999999999999999999999999999999999999998
Q ss_pred hccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCC---CccccCccCCC
Q 014478 76 LFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG---KSYSTNLAFTP 152 (424)
Q Consensus 76 l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~---~~~~gt~~y~a 152 (424)
+......++++..+..++.|++.||.|||+++ |+||||||+||+++.++.++|+|||++...... ....|+..|+|
T Consensus 91 ~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~-iiH~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~g~~~~~a 169 (285)
T cd05632 91 IYNMGNPGFEEERALFYAAEILCGLEDLHREN-TVYRDLKPENILLDDYGHIRISDLGLAVKIPEGESIRGRVGTVGYMA 169 (285)
T ss_pred HHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC-eeecCCCHHHEEECCCCCEEEecCCcceecCCCCcccCCCCCcCccC
Confidence 86544457999999999999999999999999 999999999999999999999999998764432 23468899999
Q ss_pred ccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHHHHHHHHHhcccCcCCC
Q 014478 153 PEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARER 232 (424)
Q Consensus 153 PE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~R 232 (424)
||++.+..++.++|+|||||++|+|++|..||........... ....+. ......+...+.++.+|+.+||+.||++|
T Consensus 170 PE~~~~~~~~~~~Di~slG~~l~~l~~g~~P~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~~li~~~l~~~P~~R 247 (285)
T cd05632 170 PEVLNNQRYTLSPDYWGLGCLIYEMIEGQSPFRGRKEKVKREE-VDRRVL-ETEEVYSAKFSEEAKSICKMLLTKDPKQR 247 (285)
T ss_pred hHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHHHHHHH-HHHhhh-ccccccCccCCHHHHHHHHHHccCCHhHc
Confidence 9999988899999999999999999999988865422111111 111111 11223445567889999999999999999
Q ss_pred CC-----HHHHHHH
Q 014478 233 PN-----AKSLVIS 241 (424)
Q Consensus 233 ps-----~~~~~~~ 241 (424)
|+ +++++.+
T Consensus 248 ~~~~~~~~~~l~~~ 261 (285)
T cd05632 248 LGCQEEGAGEVKRH 261 (285)
T ss_pred CCCcccChHHHHcC
Confidence 99 6677764
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with |
| >PTZ00283 serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-39 Score=320.67 Aligned_cols=234 Identities=15% Similarity=0.179 Sum_probs=192.3
Q ss_pred CCCcccceeee--ecceecccccCCC---chhhhHHHHHHHHHhcCCCcCcceeEEEEEeCC--------eeeEEEecCC
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESS---DLGETLNLEEAKAVGNLRSERLANLIGCCYEAD--------ERLLVAEFMP 68 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~---~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~--------~~~lv~e~~~ 68 (424)
|+||.||.+.+ .+..+++|++... ......+.+|+..+..++|+||++++..+.... ..++||||++
T Consensus 43 G~fG~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~~~~~~~~~~~~i~lV~Ey~~ 122 (496)
T PTZ00283 43 GATGTVLCAKRVSDGEPFAVKVVDMEGMSEADKNRAQAEVCCLLNCDFFSIVKCHEDFAKKDPRNPENVLMIALVLDYAN 122 (496)
T ss_pred CCCEEEEEEEEcCCCCEEEEEEEecccCCHHHHHHHHHHHHHHhcCCCCcEEEeecceecccccCcccceEEEEEEeCCC
Confidence 89999999877 5677888887543 334567889999999999999999988775432 2579999999
Q ss_pred CCCHHhHhccC--CCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCC------
Q 014478 69 NETLAKHLFHW--ETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRD------ 140 (424)
Q Consensus 69 ~gsL~~~l~~~--~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~------ 140 (424)
+|+|.+++... ....+++..+..++.|++.||.|||+++ |+||||||+|||++.++.+||+|||+++....
T Consensus 123 ~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH~~~-IiHrDLKP~NILl~~~~~vkL~DFGls~~~~~~~~~~~ 201 (496)
T PTZ00283 123 AGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVHSKH-MIHRDIKSANILLCSNGLVKLGDFGFSKMYAATVSDDV 201 (496)
T ss_pred CCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhCC-EecCCCCHHHEEEeCCCCEEEEecccCeeccccccccc
Confidence 99999998542 2357899999999999999999999999 99999999999999999999999999876432
Q ss_pred CCccccCccCCCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHHHHHH
Q 014478 141 GKSYSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRL 220 (424)
Q Consensus 141 ~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 220 (424)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||........ ............+..+++++.++
T Consensus 202 ~~~~~Gt~~Y~aPE~~~~~~~s~k~DVwSlGvilyeLltG~~Pf~~~~~~~~-----~~~~~~~~~~~~~~~~~~~l~~l 276 (496)
T PTZ00283 202 GRTFCGTPYYVAPEIWRRKPYSKKADMFSLGVLLYELLTLKRPFDGENMEEV-----MHKTLAGRYDPLPPSISPEMQEI 276 (496)
T ss_pred cccccCCcceeCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHH-----HHHHhcCCCCCCCCCCCHHHHHH
Confidence 2345689999999999988899999999999999999999988875422111 11111122234566778899999
Q ss_pred HHHhcccCcCCCCCHHHHHHH
Q 014478 221 ASRCLQSEARERPNAKSLVIS 241 (424)
Q Consensus 221 i~~cl~~dp~~Rps~~~~~~~ 241 (424)
+.+||..||.+|||+.+++.+
T Consensus 277 i~~~L~~dP~~RPs~~ell~~ 297 (496)
T PTZ00283 277 VTALLSSDPKRRPSSSKLLNM 297 (496)
T ss_pred HHHHcccChhhCcCHHHHHhC
Confidence 999999999999999999876
|
|
| >cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.8e-39 Score=291.24 Aligned_cols=234 Identities=20% Similarity=0.313 Sum_probs=191.9
Q ss_pred CCCcccceeeee-cceecccccCCCchhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHhHhccCC
Q 014478 2 GGRCSKFSICWF-HCHLKSSVLESSDLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWE 80 (424)
Q Consensus 2 G~~g~v~~~~~~-~~~v~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~ 80 (424)
|++|.||++.+. +..+++|.+.........|.+|++++++++||||+++++++......++||||+++++|.+++.. .
T Consensus 15 g~~g~v~~~~~~~~~~~~~k~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~-~ 93 (256)
T cd05112 15 GQFGLVWLGYWLEKRKVAIKTIREGAMSEEDFIEEAQVMMKLSHPKLVQLYGVCTERSPICLVFEFMEHGCLSDYLRA-Q 93 (256)
T ss_pred cccceEEEEEEeCCCeEEEEECCCCCCCHHHHHHHHHHHHhCCCCCeeeEEEEEccCCceEEEEEcCCCCcHHHHHHh-C
Confidence 889999999885 56677777766655567899999999999999999999999998899999999999999999864 2
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCCC-----ccccCccCCCccc
Q 014478 81 TQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGK-----SYSTNLAFTPPEY 155 (424)
Q Consensus 81 ~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~~-----~~~gt~~y~aPE~ 155 (424)
...+++..+..++.|++.+|.|||+.+ ++||||||+||+++.++.++|+|||+++...... ...++..|+|||.
T Consensus 94 ~~~~~~~~~~~~~~~l~~~l~~lH~~~-i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~~aPe~ 172 (256)
T cd05112 94 RGKFSQETLLGMCLDVCEGMAYLESSN-VIHRDLAARNCLVGENQVVKVSDFGMTRFVLDDQYTSSTGTKFPVKWSSPEV 172 (256)
T ss_pred ccCCCHHHHHHHHHHHHHHHHHHHHCC-ccccccccceEEEcCCCeEEECCCcceeecccCcccccCCCccchhhcCHhH
Confidence 356899999999999999999999999 9999999999999999999999999987554321 2234578999999
Q ss_pred cccCCCCCCcceehhHHHHHHHhh-CCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHHHHHHHHHhcccCcCCCCC
Q 014478 156 MRTGRVTPESVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERPN 234 (424)
Q Consensus 156 ~~~~~~~~~~Dv~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps 234 (424)
+.++.++.++||||||+++|||++ |..|+....... .............+...+..+.+++.+||..+|++|||
T Consensus 173 ~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~ 247 (256)
T cd05112 173 FSFSKYSSKSDVWSFGVLMWEVFSEGKTPYENRSNSE-----VVETINAGFRLYKPRLASQSVYELMQHCWKERPEDRPS 247 (256)
T ss_pred hccCCcChHHHHHHHHHHHHHHHcCCCCCCCcCCHHH-----HHHHHhCCCCCCCCCCCCHHHHHHHHHHcccChhhCCC
Confidence 998889999999999999999998 777665432111 11111111122223445788999999999999999999
Q ss_pred HHHHHHHH
Q 014478 235 AKSLVISL 242 (424)
Q Consensus 235 ~~~~~~~l 242 (424)
+.++++.|
T Consensus 248 ~~~~l~~l 255 (256)
T cd05112 248 FSLLLHQL 255 (256)
T ss_pred HHHHHHhh
Confidence 99999876
|
Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ |
| >cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-39 Score=304.13 Aligned_cols=231 Identities=17% Similarity=0.249 Sum_probs=187.8
Q ss_pred CCCcccceeeee--cceecccccCCCc----hhhhHHHHHHHHHhcC-CCcCcceeEEEEEeCCeeeEEEecCCCCCHHh
Q 014478 2 GGRCSKFSICWF--HCHLKSSVLESSD----LGETLNLEEAKAVGNL-RSERLANLIGCCYEADERLLVAEFMPNETLAK 74 (424)
Q Consensus 2 G~~g~v~~~~~~--~~~v~~~~~~~~~----~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~ 74 (424)
|++|.||.+.+. +..+++|++.... .....+..|..++..+ .|++|+++++++...+..++||||+++|+|.+
T Consensus 11 G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~~g~L~~ 90 (323)
T cd05616 11 GSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMY 90 (323)
T ss_pred CCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEecCCEEEEEEcCCCCCCHHH
Confidence 899999999874 4567777765432 2334567788888877 58999999999999999999999999999999
Q ss_pred HhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCC----CCccccCccC
Q 014478 75 HLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRD----GKSYSTNLAF 150 (424)
Q Consensus 75 ~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~----~~~~~gt~~y 150 (424)
++.. ...+++.++..++.|++.||.|||+++ |+||||||+|||++.++.+||+|||+++.... .....||+.|
T Consensus 91 ~~~~--~~~~~~~~~~~~~~qi~~aL~~LH~~~-ivHrDlkp~Nill~~~~~~kL~DfG~~~~~~~~~~~~~~~~gt~~y 167 (323)
T cd05616 91 QIQQ--VGRFKEPHAVFYAAEIAIGLFFLHSKG-IIYRDLKLDNVMLDSEGHIKIADFGMCKENMWDGVTTKTFCGTPDY 167 (323)
T ss_pred HHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-EEecCCCHHHeEECCCCcEEEccCCCceecCCCCCccccCCCChhh
Confidence 9864 457899999999999999999999999 99999999999999999999999999875432 2345689999
Q ss_pred CCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHHHHHHHHHhcccCcC
Q 014478 151 TPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEAR 230 (424)
Q Consensus 151 ~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~ 230 (424)
+|||++.+..++.++|||||||++|||++|+.||........ ...+... ....|...+.++.+++.+||+.||.
T Consensus 168 ~aPE~~~~~~~~~~~DiwSlGvil~elltg~~Pf~~~~~~~~----~~~i~~~--~~~~p~~~s~~~~~li~~~l~~~p~ 241 (323)
T cd05616 168 IAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDEL----FQSIMEH--NVAYPKSMSKEAVAICKGLMTKHPG 241 (323)
T ss_pred cCHHHhcCCCCCCccchhchhHHHHHHHhCCCCCCCCCHHHH----HHHHHhC--CCCCCCcCCHHHHHHHHHHcccCHH
Confidence 999999988999999999999999999999988876422211 1111111 2234566788999999999999999
Q ss_pred CCCCH-----HHHHHH
Q 014478 231 ERPNA-----KSLVIS 241 (424)
Q Consensus 231 ~Rps~-----~~~~~~ 241 (424)
+|++. .++..+
T Consensus 242 ~R~~~~~~~~~~i~~h 257 (323)
T cd05616 242 KRLGCGPEGERDIKEH 257 (323)
T ss_pred hcCCCCCCCHHHHhcC
Confidence 99975 555543
|
Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and |
| >cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-39 Score=305.10 Aligned_cols=226 Identities=19% Similarity=0.216 Sum_probs=183.0
Q ss_pred CCCcccceeee--ecceecccccCCCc----hhhhHHHHHHH-HHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHh
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESSD----LGETLNLEEAK-AVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAK 74 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~~----~~~~~~~~E~~-~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~ 74 (424)
|++|.||.+.+ .+..+++|++.... .....+..|.. +++.++||||+++++++.+.+..++||||++||+|..
T Consensus 6 G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~ 85 (321)
T cd05603 6 GSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGLHYSFQTAEKLYFVLDYVNGGELFF 85 (321)
T ss_pred CCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCCCCCccceeeEEEcCCEEEEEEcCCCCCCHHH
Confidence 89999999987 45667777765332 22344555554 6788899999999999999999999999999999998
Q ss_pred HhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCC----CCccccCccC
Q 014478 75 HLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRD----GKSYSTNLAF 150 (424)
Q Consensus 75 ~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~----~~~~~gt~~y 150 (424)
++.. ...+++.++..++.||+.||.|||+++ |+||||||+||+++.++.+||+|||+++.... .....||+.|
T Consensus 86 ~l~~--~~~~~~~~~~~~~~qi~~~L~~lH~~~-ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y 162 (321)
T cd05603 86 HLQR--ERCFLEPRARFYAAEVASAIGYLHSLN-IIYRDLKPENILLDSQGHVVLTDFGLCKEGVEPEETTSTFCGTPEY 162 (321)
T ss_pred HHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-eEeccCCHHHeEECCCCCEEEccCCCCccCCCCCCccccccCCccc
Confidence 8864 457889999999999999999999999 99999999999999999999999999875322 1234689999
Q ss_pred CCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHHHHHHHHHhcccCcC
Q 014478 151 TPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEAR 230 (424)
Q Consensus 151 ~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~ 230 (424)
+|||++.+..++.++|||||||++|||++|..||......... ..... .....+...+.++.+++.+||+.||.
T Consensus 163 ~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~----~~i~~--~~~~~~~~~~~~~~~li~~~l~~~p~ 236 (321)
T cd05603 163 LAPEVLRKEPYDRTVDWWCLGAVLYEMLYGLPPFYSRDVSQMY----DNILH--KPLQLPGGKTVAACDLLVGLLHKDQR 236 (321)
T ss_pred CCHHHhcCCCCCCcCcccccchhhhhhhcCCCCCCCCCHHHHH----HHHhc--CCCCCCCCCCHHHHHHHHHHccCCHh
Confidence 9999999888999999999999999999999888654221111 11111 12234556678899999999999999
Q ss_pred CCCCHH
Q 014478 231 ERPNAK 236 (424)
Q Consensus 231 ~Rps~~ 236 (424)
+||++.
T Consensus 237 ~R~~~~ 242 (321)
T cd05603 237 RRLGAK 242 (321)
T ss_pred hcCCCC
Confidence 998764
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1. |
| >cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-38 Score=292.21 Aligned_cols=237 Identities=21% Similarity=0.255 Sum_probs=191.4
Q ss_pred CCCcccceeeee-----cceecccccCCC--chhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHh
Q 014478 2 GGRCSKFSICWF-----HCHLKSSVLESS--DLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAK 74 (424)
Q Consensus 2 G~~g~v~~~~~~-----~~~v~~~~~~~~--~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~ 74 (424)
|++|.||.+.+. ...+++|.+... ....+.|.+|+.++++++||||+++++++..++..++||||+++++|.+
T Consensus 15 g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~ 94 (267)
T cd05066 15 GEFGEVCSGRLKLPGKREIPVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSKPVMIVTEYMENGSLDA 94 (267)
T ss_pred cCCCceEEEEEecCCCCceEEEEEECCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccEEEEEcCCCCCHHH
Confidence 889999998773 124666665433 2335688999999999999999999999999999999999999999999
Q ss_pred HhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCCCc-------cccC
Q 014478 75 HLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKS-------YSTN 147 (424)
Q Consensus 75 ~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~~~-------~~gt 147 (424)
++.. ....+++.+++.++.|++.||.|||+++ ++||||||+||+++.++.++|+|||+++....... ..++
T Consensus 95 ~~~~-~~~~~~~~~~~~i~~~i~~~l~~lH~~~-i~h~dlkp~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~ 172 (267)
T cd05066 95 FLRK-HDGQFTVIQLVGMLRGIASGMKYLSDMG-YVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIP 172 (267)
T ss_pred HHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCC-EeehhhchhcEEECCCCeEEeCCCCcccccccccceeeecCCCccc
Confidence 9965 2356899999999999999999999999 99999999999999999999999999886543321 1224
Q ss_pred ccCCCccccccCCCCCCcceehhHHHHHHHhh-CCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHHHHHHHHHhcc
Q 014478 148 LAFTPPEYMRTGRVTPESVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQ 226 (424)
Q Consensus 148 ~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~ 226 (424)
..|++||++.+..++.++|+||||+++|++++ |..||....... ...........+.+..+++.+.+++.+||+
T Consensus 173 ~~y~~pe~~~~~~~~~~~Dv~slG~~l~ell~~g~~p~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~li~~~l~ 247 (267)
T cd05066 173 IRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWEMSNQD-----VIKAIEEGYRLPAPMDCPAALHQLMLDCWQ 247 (267)
T ss_pred eeecCHhHhccCccCchhhhHHHHHHHHHHhcCCCCCcccCCHHH-----HHHHHhCCCcCCCCCCCCHHHHHHHHHHcc
Confidence 67999999998889999999999999999886 887765432111 111111222233445678899999999999
Q ss_pred cCcCCCCCHHHHHHHHHHH
Q 014478 227 SEARERPNAKSLVISLMSL 245 (424)
Q Consensus 227 ~dp~~Rps~~~~~~~l~~~ 245 (424)
.+|.+|||+.++++.|..+
T Consensus 248 ~~p~~Rp~~~~i~~~l~~~ 266 (267)
T cd05066 248 KDRNERPKFEQIVSILDKL 266 (267)
T ss_pred cCchhCCCHHHHHHHHHhh
Confidence 9999999999999988764
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul |
| >cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-38 Score=289.25 Aligned_cols=235 Identities=22% Similarity=0.309 Sum_probs=192.3
Q ss_pred CCCcccceeeee-cceecccccCCCc--hhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHhHhcc
Q 014478 2 GGRCSKFSICWF-HCHLKSSVLESSD--LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFH 78 (424)
Q Consensus 2 G~~g~v~~~~~~-~~~v~~~~~~~~~--~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~ 78 (424)
|++|.||.+.+. +..+++|...... .....+.+|++++++++||||+++++++......++||||+++++|.+++..
T Consensus 6 g~~g~v~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~l~~~l~~ 85 (251)
T cd05041 6 GNFGDVYKGVLKGNTEVAVKTCRSTLPPDLKRKFLQEAEILKQYDHPNIVKLIGVCVQKQPIYIVMELVPGGSLLTFLRK 85 (251)
T ss_pred CCCceEEEEEEeCCCcEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCCeEEEEEcCCCCcHHHHHHh
Confidence 889999999875 6777777665433 2456889999999999999999999999999999999999999999999865
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCCC------ccccCccCCC
Q 014478 79 WETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGK------SYSTNLAFTP 152 (424)
Q Consensus 79 ~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~~------~~~gt~~y~a 152 (424)
....+++..+..++.+++.+|.|||+++ ++||||||+||+++.++.++|+|||+++...... ....+..|+|
T Consensus 86 -~~~~~~~~~~~~~~~~~~~~l~~lH~~~-i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~y~~ 163 (251)
T cd05041 86 -KKNRLTVKKLLQMSLDAAAGMEYLESKN-CIHRDLAARNCLVGENNVLKISDFGMSREEEGGIYTVSDGLKQIPIKWTA 163 (251)
T ss_pred -cCCCCCHHHHHHHHHHHHHHHHHHHhCC-EehhhcCcceEEEcCCCcEEEeeccccccccCCcceeccccCcceeccCC
Confidence 2456889999999999999999999999 9999999999999999999999999987654221 1223567999
Q ss_pred ccccccCCCCCCcceehhHHHHHHHhh-CCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHHHHHHHHHhcccCcCC
Q 014478 153 PEYMRTGRVTPESVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARE 231 (424)
Q Consensus 153 PE~~~~~~~~~~~Dv~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~ 231 (424)
||.+.++.++.++|+||||+++|+|++ |..|+...... ..............+...+.++.+++.+||..+|++
T Consensus 164 PE~~~~~~~~~~~Di~slG~i~~~l~t~~~~p~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~ 238 (251)
T cd05041 164 PEALNYGRYTSESDVWSYGILLWETFSLGDTPYPGMSNQ-----QTRERIESGYRMPAPQLCPEEIYRLMLQCWAYDPEN 238 (251)
T ss_pred hHhhccCCCCcchhHHHHHHHHHHHHhccCCCCccCCHH-----HHHHHHhcCCCCCCCccCCHHHHHHHHHHhccChhh
Confidence 999988889999999999999999999 66666543211 111112222223345567889999999999999999
Q ss_pred CCCHHHHHHHHH
Q 014478 232 RPNAKSLVISLM 243 (424)
Q Consensus 232 Rps~~~~~~~l~ 243 (424)
|||+.++++.|.
T Consensus 239 Rp~~~ell~~l~ 250 (251)
T cd05041 239 RPSFSEIYNELQ 250 (251)
T ss_pred CcCHHHHHHHhh
Confidence 999999998875
|
Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k |
| >cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.9e-39 Score=292.70 Aligned_cols=233 Identities=18% Similarity=0.238 Sum_probs=191.0
Q ss_pred CCCcccceeee--ecceecccccCCCc------hhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHH
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESSD------LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLA 73 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~~------~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~ 73 (424)
|++|.||.+.. .+..+++|++.... .....+.+|++++++++||||+++++++..+...++||||+++++|.
T Consensus 13 g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~l~ 92 (263)
T cd06625 13 GAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQYYGCLRDDETLSIFMEYMPGGSVK 92 (263)
T ss_pred CCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEccCCeEEEEEEECCCCcHH
Confidence 78899999876 45667777654322 12356888999999999999999999999999999999999999999
Q ss_pred hHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCC-------Ccccc
Q 014478 74 KHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG-------KSYST 146 (424)
Q Consensus 74 ~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~-------~~~~g 146 (424)
+++.. ...+++..+..++.|++.||.|||+.+ ++||||+|+||+++.++.++|+|||+++..... ....+
T Consensus 93 ~~~~~--~~~~~~~~~~~~~~~l~~~l~~lH~~~-i~H~dl~p~nilv~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~ 169 (263)
T cd06625 93 DQLKA--YGALTETVTRKYTRQILEGVEYLHSNM-IVHRDIKGANILRDSAGNVKLGDFGASKRLQTICSSGTGMKSVTG 169 (263)
T ss_pred HHHHH--hCCCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCCHHHEEEcCCCCEEEeecccceeccccccccccccCCCc
Confidence 99864 456899999999999999999999999 999999999999999999999999998754322 23456
Q ss_pred CccCCCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHHHHHHHHHhcc
Q 014478 147 NLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQ 226 (424)
Q Consensus 147 t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~ 226 (424)
+..|+|||.+.+..++.++||||||+++|+|++|+.||..... . ...............+..++..+.+++.+||.
T Consensus 170 ~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~--~--~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~ 245 (263)
T cd06625 170 TPYWMSPEVISGEGYGRKADVWSVGCTVVEMLTEKPPWAEFEA--M--AAIFKIATQPTNPQLPSHVSPDARNFLRRTFV 245 (263)
T ss_pred CccccCcceeccCCCCchhhhHHHHHHHHHHHhCCCCccccch--H--HHHHHHhccCCCCCCCccCCHHHHHHHHHHhh
Confidence 7899999999988899999999999999999999987654211 1 11111222223334566678899999999999
Q ss_pred cCcCCCCCHHHHHHH
Q 014478 227 SEARERPNAKSLVIS 241 (424)
Q Consensus 227 ~dp~~Rps~~~~~~~ 241 (424)
.+|.+|||+.+++.+
T Consensus 246 ~~p~~Rpt~~~ll~~ 260 (263)
T cd06625 246 ENAKKRPSAEELLRH 260 (263)
T ss_pred cCcccCCCHHHHhhC
Confidence 999999999999865
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t |
| >cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.9e-39 Score=291.05 Aligned_cols=234 Identities=15% Similarity=0.195 Sum_probs=192.7
Q ss_pred CCCcccceeee--ecceecccccC--CCchhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHhHhc
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLE--SSDLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLF 77 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~--~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~ 77 (424)
|++|.||.+.+ .+..+++|.+. ......+.+.+|+.+++.++||||+++++.+..++..+++|||+++|+|.+++.
T Consensus 11 g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~ 90 (255)
T cd08219 11 GSFGRALLVQHVNSDQKYAMKEIRLPKSSSAVEDSRKEAVLLAKMKHPNIVAFKESFEADGHLYIVMEYCDGGDLMQKIK 90 (255)
T ss_pred cCCeEEEEEEEcCCCceEEEEEEEcCcchHHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEeeCCCCcHHHHHH
Confidence 88999998887 45556666553 233345678899999999999999999999999999999999999999999886
Q ss_pred cCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCC----CccccCccCCCc
Q 014478 78 HWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG----KSYSTNLAFTPP 153 (424)
Q Consensus 78 ~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~----~~~~gt~~y~aP 153 (424)
......+++..++.++.|++.||.|||+++ ++|+||||+||+++.++.++++|||.+...... ....++..|+||
T Consensus 91 ~~~~~~~~~~~~~~~~~~i~~al~~lH~~~-i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~aP 169 (255)
T cd08219 91 LQRGKLFPEDTILQWFVQMCLGVQHIHEKR-VLHRDIKSKNIFLTQNGKVKLGDFGSARLLTSPGAYACTYVGTPYYVPP 169 (255)
T ss_pred hccCCCCCHHHHHHHHHHHHHHHHHHhhCC-cccCCCCcceEEECCCCcEEEcccCcceeecccccccccccCCccccCH
Confidence 544567899999999999999999999999 999999999999999999999999998765432 234678899999
Q ss_pred cccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHHHHHHHHHhcccCcCCCC
Q 014478 154 EYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERP 233 (424)
Q Consensus 154 E~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rp 233 (424)
|++.+..++.++|+||||+++|+|++|..||........ ............+..++..+.+++.+||+.||++||
T Consensus 170 E~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp 244 (255)
T cd08219 170 EIWENMPYNNKSDIWSLGCILYELCTLKHPFQANSWKNL-----ILKVCQGSYKPLPSHYSYELRSLIKQMFKRNPRSRP 244 (255)
T ss_pred HHHccCCcCchhhhhhhchhheehhhccCCCCCCCHHHH-----HHHHhcCCCCCCCcccCHHHHHHHHHHHhCCcccCC
Confidence 999888899999999999999999999988765321111 111112222334556778899999999999999999
Q ss_pred CHHHHHHH
Q 014478 234 NAKSLVIS 241 (424)
Q Consensus 234 s~~~~~~~ 241 (424)
|+.+++..
T Consensus 245 ~~~~il~~ 252 (255)
T cd08219 245 SATTILSR 252 (255)
T ss_pred CHHHHhhc
Confidence 99999753
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati |
| >cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-39 Score=305.74 Aligned_cols=227 Identities=18% Similarity=0.185 Sum_probs=184.1
Q ss_pred CCCcccceeee--ecceecccccCCCc----hhhhHHHHHHH-HHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHh
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESSD----LGETLNLEEAK-AVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAK 74 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~~----~~~~~~~~E~~-~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~ 74 (424)
|+||.||.+.+ .+..+++|++.... .....+..|.. +++.++||||+++++++..++..++||||++||+|..
T Consensus 6 G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~ 85 (325)
T cd05604 6 GSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTTEKLYFVLDFVNGGELFF 85 (325)
T ss_pred CCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCCCCCCccEEEEEecCCEEEEEEcCCCCCCHHH
Confidence 89999999987 46677878775432 23345556655 5677899999999999999999999999999999999
Q ss_pred HhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCC----CCccccCccC
Q 014478 75 HLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRD----GKSYSTNLAF 150 (424)
Q Consensus 75 ~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~----~~~~~gt~~y 150 (424)
++.. ...+++.++..++.||+.||.|||+++ ++||||||+|||++.++.+||+|||+++.... .....||+.|
T Consensus 86 ~l~~--~~~~~~~~~~~~~~qi~~al~~lH~~g-ivH~Dlkp~NIll~~~~~~kL~DfG~~~~~~~~~~~~~~~~gt~~y 162 (325)
T cd05604 86 HLQR--ERSFPEPRARFYAAEIASALGYLHSIN-IVYRDLKPENILLDSQGHVVLTDFGLCKEGIAQSDTTTTFCGTPEY 162 (325)
T ss_pred HHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-eeecCCCHHHeEECCCCCEEEeecCCcccCCCCCCCcccccCChhh
Confidence 8864 567999999999999999999999999 99999999999999999999999999875322 2344689999
Q ss_pred CCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHHHHHHHHHhcccCcC
Q 014478 151 TPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEAR 230 (424)
Q Consensus 151 ~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~ 230 (424)
+|||++.+..++.++|||||||++|+|++|..||......... ...... ....+...+..+.+++.+||..||.
T Consensus 163 ~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~~~----~~~~~~--~~~~~~~~~~~~~~ll~~ll~~~p~ 236 (325)
T cd05604 163 LAPEVIRKQPYDNTVDWWCLGAVLYEMLYGLPPFYCRDVAEMY----DNILHK--PLVLRPGASLTAWSILEELLEKDRQ 236 (325)
T ss_pred CCHHHHcCCCCCCcCccccccceehhhhcCCCCCCCCCHHHHH----HHHHcC--CccCCCCCCHHHHHHHHHHhccCHH
Confidence 9999999888999999999999999999999888754222111 111111 1123345678899999999999999
Q ss_pred CCCCHHH
Q 014478 231 ERPNAKS 237 (424)
Q Consensus 231 ~Rps~~~ 237 (424)
+||++.+
T Consensus 237 ~R~~~~~ 243 (325)
T cd05604 237 RRLGAKE 243 (325)
T ss_pred hcCCCCC
Confidence 9998753
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels, |
| >cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-38 Score=291.89 Aligned_cols=239 Identities=19% Similarity=0.240 Sum_probs=192.5
Q ss_pred CCCcccceeeeecc-----eecccccCCC--chhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHh
Q 014478 2 GGRCSKFSICWFHC-----HLKSSVLESS--DLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAK 74 (424)
Q Consensus 2 G~~g~v~~~~~~~~-----~v~~~~~~~~--~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~ 74 (424)
|++|.||.+.+... .+++|..... ....+.+.+|+.+++.++||||+++++++.. ...++||||+++|+|.+
T Consensus 17 g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~-~~~~lv~e~~~~~~L~~ 95 (270)
T cd05056 17 GQFGDVYQGVYMSPENEKIAVAVKTCKNCTSPSVREKFLQEAYIMRQFDHPHIVKLIGVITE-NPVWIVMELAPLGELRS 95 (270)
T ss_pred ccceeEEEEEEecCCCCCcceEEEecCCcCCHHHHHHHHHHHHHHHhCCCCchhceeEEEcC-CCcEEEEEcCCCCcHHH
Confidence 89999999987543 3555555433 3345689999999999999999999999875 45789999999999999
Q ss_pred HhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCCC-----ccccCcc
Q 014478 75 HLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGK-----SYSTNLA 149 (424)
Q Consensus 75 ~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~~-----~~~gt~~ 149 (424)
++.. ....+++.+++.++.|++.||.|||+.+ ++||||||+||+++.++.++|+|||+++...... ...++..
T Consensus 96 ~l~~-~~~~~~~~~~~~~~~~l~~~l~~lH~~~-~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~ 173 (270)
T cd05056 96 YLQV-NKYSLDLASLILYSYQLSTALAYLESKR-FVHRDIAARNVLVSSPDCVKLGDFGLSRYLEDESYYKASKGKLPIK 173 (270)
T ss_pred HHHh-CCCCCCHHHHHHHHHHHHHHHHHHHhCC-eeccccChheEEEecCCCeEEccCceeeecccccceecCCCCcccc
Confidence 9965 2346899999999999999999999999 9999999999999999999999999987654332 1223467
Q ss_pred CCCccccccCCCCCCcceehhHHHHHHHhh-CCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHHHHHHHHHhcccC
Q 014478 150 FTPPEYMRTGRVTPESVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSE 228 (424)
Q Consensus 150 y~aPE~~~~~~~~~~~Dv~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~d 228 (424)
|+|||.+....++.++||||||+++||+++ |..||....... .............+..++.++.+++.+||..+
T Consensus 174 y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~ 248 (270)
T cd05056 174 WMAPESINFRRFTSASDVWMFGVCMWEILMLGVKPFQGVKNND-----VIGRIENGERLPMPPNCPPTLYSLMTKCWAYD 248 (270)
T ss_pred ccChhhhccCCCCchhhhHHHHHHHHHHHHcCCCCCCCCCHHH-----HHHHHHcCCcCCCCCCCCHHHHHHHHHHcCCC
Confidence 999999988889999999999999999986 888876542111 11111112222345667889999999999999
Q ss_pred cCCCCCHHHHHHHHHHHhhh
Q 014478 229 ARERPNAKSLVISLMSLQKE 248 (424)
Q Consensus 229 p~~Rps~~~~~~~l~~~~~~ 248 (424)
|++|||+.+++..|..+..+
T Consensus 249 P~~Rpt~~~~~~~l~~~~~~ 268 (270)
T cd05056 249 PSKRPRFTELKAQLSDILQE 268 (270)
T ss_pred hhhCcCHHHHHHHHHHHHhc
Confidence 99999999999999887654
|
Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions |
| >cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase) | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-38 Score=293.11 Aligned_cols=240 Identities=16% Similarity=0.227 Sum_probs=193.7
Q ss_pred CCCcccceeeeec------ceecccccCCC--chhhhHHHHHHHHHhcCCCcCcceeEEEEEe-CCeeeEEEecCCCCCH
Q 014478 2 GGRCSKFSICWFH------CHLKSSVLESS--DLGETLNLEEAKAVGNLRSERLANLIGCCYE-ADERLLVAEFMPNETL 72 (424)
Q Consensus 2 G~~g~v~~~~~~~------~~v~~~~~~~~--~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-~~~~~lv~e~~~~gsL 72 (424)
|++|.||.+.+.. ..+++|.+... ......+.+|+.++++++||||+++++++.. +...++++||+++|+|
T Consensus 17 g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~~~~~~~~~~L 96 (280)
T cd05043 17 GTFGRIFYGILIDEKPGKEEEVFVKTVKDHASEIQVTLLLQESCLLYGLSHQNILPILHVCIEDGEPPFVLYPYMNWGNL 96 (280)
T ss_pred cCCceEEEEEEecCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCCCEEEEEcCCCCcH
Confidence 8999999999854 55666665433 2345678899999999999999999999876 4678899999999999
Q ss_pred HhHhccCCC------CCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCCC----
Q 014478 73 AKHLFHWET------QPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGK---- 142 (424)
Q Consensus 73 ~~~l~~~~~------~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~~---- 142 (424)
.+++..... ..+++.+++.++.|++.||.|||+++ ++||||||+||+++.++.+||+|||+++......
T Consensus 97 ~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~-i~H~di~p~nil~~~~~~~kl~d~g~~~~~~~~~~~~~ 175 (280)
T cd05043 97 KLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHKRG-VIHKDIAARNCVIDEELQVKITDNALSRDLFPMDYHCL 175 (280)
T ss_pred HHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHHCC-EeecccCHhhEEEcCCCcEEECCCCCcccccCCceEEe
Confidence 999854321 46899999999999999999999999 9999999999999999999999999998653321
Q ss_pred --ccccCccCCCccccccCCCCCCcceehhHHHHHHHhh-CCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHHHHH
Q 014478 143 --SYSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVR 219 (424)
Q Consensus 143 --~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 219 (424)
...++..|+|||++.+..++.++|||||||++||+++ |+.|+...... ..............+..+++++.+
T Consensus 176 ~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~ 250 (280)
T cd05043 176 GDNENRPVKWMALESLVNKEYSSASDVWSFGVLLWELMTLGQTPYVEIDPF-----EMAAYLKDGYRLAQPINCPDELFA 250 (280)
T ss_pred CCCCCcchhccCHHHHhcCCCCchhhHHHhHHHHHHHhcCCCCCcCcCCHH-----HHHHHHHcCCCCCCCCcCCHHHHH
Confidence 2345678999999988889999999999999999999 88776543111 111122222222334456789999
Q ss_pred HHHHhcccCcCCCCCHHHHHHHHHHHhh
Q 014478 220 LASRCLQSEARERPNAKSLVISLMSLQK 247 (424)
Q Consensus 220 li~~cl~~dp~~Rps~~~~~~~l~~~~~ 247 (424)
++.+||..||++|||+.+++..|..+.+
T Consensus 251 li~~~l~~~p~~Rps~~~~~~~l~~~~~ 278 (280)
T cd05043 251 VMACCWALDPEERPSFSQLVQCLTDFHA 278 (280)
T ss_pred HHHHHcCCChhhCCCHHHHHHHHHHHHh
Confidence 9999999999999999999999988765
|
Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It |
| >cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-38 Score=294.74 Aligned_cols=242 Identities=20% Similarity=0.288 Sum_probs=189.8
Q ss_pred CCCcccceeee------ecceecccccCCCc-hhhhHHHHHHHHHhcCCCcCcceeEEEEEeC--CeeeEEEecCCCCCH
Q 014478 2 GGRCSKFSICW------FHCHLKSSVLESSD-LGETLNLEEAKAVGNLRSERLANLIGCCYEA--DERLLVAEFMPNETL 72 (424)
Q Consensus 2 G~~g~v~~~~~------~~~~v~~~~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~--~~~~lv~e~~~~gsL 72 (424)
|++|.||.+.+ .+..+++|++.... ...+.|.+|+++++.++||||+++++++... ...++||||+++|+|
T Consensus 15 g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~L 94 (284)
T cd05081 15 GNFGSVELCRYDPLQDNTGEVVAVKKLQHSTAEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLRLVMEYLPYGSL 94 (284)
T ss_pred CCCceEEEEEecCCcCCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEccCCCCceEEEEEecCCCCH
Confidence 89999998875 35567777765443 3356889999999999999999999987543 457899999999999
Q ss_pred HhHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCCCc-------cc
Q 014478 73 AKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKS-------YS 145 (424)
Q Consensus 73 ~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~~~-------~~ 145 (424)
.+++.. ....+++..+..++.|++.||.|||+++ ++||||||+||+++.++.+||+|||+++....... ..
T Consensus 95 ~~~l~~-~~~~l~~~~~~~~~~~l~~aL~~LH~~~-i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~ 172 (284)
T cd05081 95 RDYLQK-HRERLDHRKLLLYASQICKGMEYLGSKR-YVHRDLATRNILVESENRVKIGDFGLTKVLPQDKEYYKVREPGE 172 (284)
T ss_pred HHHHHh-cCcCCCHHHHHHHHHHHHHHHHHHHHCC-ceeccCCHhhEEECCCCeEEECCCcccccccCCCcceeecCCCC
Confidence 999864 2346899999999999999999999999 99999999999999999999999999886543321 12
Q ss_pred cCccCCCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHh---h--------hhhhHhhhcccCCCCCchhH
Q 014478 146 TNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIR---S--------KNFLLLMDSALEGHFSNDEG 214 (424)
Q Consensus 146 gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~---~--------~~~~~~~~~~~~~~~~~~~~ 214 (424)
++..|+|||++.+..++.++|||||||++|||++|..++......... . ...............+..++
T Consensus 173 ~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (284)
T cd05081 173 SPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYSDKSCSPPAEFMRMMGNDKQGQMIVYHLIELLKNNGRLPAPPGCP 252 (284)
T ss_pred CceEeeCHHHhccCCcChHHHHHHHHHHHHHHhhcCCcCCCcchhhhhhcccccccccchHHHHHHHhcCCcCCCCCCCC
Confidence 344699999999888999999999999999999987554322111100 0 00111122222223445677
Q ss_pred HHHHHHHHHhcccCcCCCCCHHHHHHHHHHH
Q 014478 215 TELVRLASRCLQSEARERPNAKSLVISLMSL 245 (424)
Q Consensus 215 ~~l~~li~~cl~~dp~~Rps~~~~~~~l~~~ 245 (424)
.++.+++.+||..+|++|||+.+++..|+.+
T Consensus 253 ~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~~ 283 (284)
T cd05081 253 AEIYAIMKECWNNDPSQRPSFSELALQVEAI 283 (284)
T ss_pred HHHHHHHHHHccCChhhCCCHHHHHHHHHhc
Confidence 8999999999999999999999999988754
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th |
| >cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-38 Score=295.86 Aligned_cols=240 Identities=18% Similarity=0.235 Sum_probs=187.3
Q ss_pred CCCcccceeeeec------------------ceecccccCCCc--hhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeee
Q 014478 2 GGRCSKFSICWFH------------------CHLKSSVLESSD--LGETLNLEEAKAVGNLRSERLANLIGCCYEADERL 61 (424)
Q Consensus 2 G~~g~v~~~~~~~------------------~~v~~~~~~~~~--~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 61 (424)
|+||.||.+.+.. ..+++|++.... ...+.+.+|++++++++||||+++++++..+...+
T Consensus 16 G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~ 95 (296)
T cd05051 16 GQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASDNAREDFLKEVKILSRLSDPNIARLLGVCTVDPPLC 95 (296)
T ss_pred CCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccCHHHHHHHHHHHHHHHhcCCCCEeEEEEEEecCCCcE
Confidence 8999999887633 235566655432 34678889999999999999999999999999999
Q ss_pred EEEecCCCCCHHhHhccCC---------CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccc
Q 014478 62 LVAEFMPNETLAKHLFHWE---------TQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSF 132 (424)
Q Consensus 62 lv~e~~~~gsL~~~l~~~~---------~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Df 132 (424)
++|||+++++|.+++.... ...+++..++.++.|++.||.|||+++ ++||||||+||+++.++.++|+||
T Consensus 96 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~~~-i~H~dlkp~Nili~~~~~~~l~df 174 (296)
T cd05051 96 MIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLESLN-FVHRDLATRNCLVGKNYTIKIADF 174 (296)
T ss_pred EEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHHcC-ccccccchhceeecCCCceEEccc
Confidence 9999999999999986532 126899999999999999999999999 999999999999999999999999
Q ss_pred cccccCCCC------CccccCccCCCccccccCCCCCCcceehhHHHHHHHhh--CCCCCCchhhHHHhhhhhhHhh---
Q 014478 133 GLMKNSRDG------KSYSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLS--GKHIPPSHALDLIRSKNFLLLM--- 201 (424)
Q Consensus 133 g~~~~~~~~------~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~--g~~~~~~~~~~~~~~~~~~~~~--- 201 (424)
|+++..... ....++..|+|||++.++.++.++|||||||++|||++ +..|+........-. ......
T Consensus 175 g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p~~~~~~~~~~~-~~~~~~~~~ 253 (296)
T cd05051 175 GMSRNLYSSDYYRVQGRAPLPIRWMAWESVLLGKFTTKSDVWAFGVTLWEILTLCREQPYEHLTDQQVIE-NAGHFFRDD 253 (296)
T ss_pred cceeecccCcceeecCcCCCCceecCHHHhhcCCCCccchhhhhHHHHHHHHhcCCCCCCCCcChHHHHH-HHHhccccc
Confidence 998764322 22345678999999998889999999999999999998 444443221111100 000000
Q ss_pred hcccCCCCCchhHHHHHHHHHHhcccCcCCCCCHHHHHHHHH
Q 014478 202 DSALEGHFSNDEGTELVRLASRCLQSEARERPNAKSLVISLM 243 (424)
Q Consensus 202 ~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~~~~~l~ 243 (424)
........+..++.++.+++.+||+.||++|||+.++++.|+
T Consensus 254 ~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rpt~~el~~~L~ 295 (296)
T cd05051 254 GRQIYLPRPPNCPKDIYELMLECWRRDEEDRPTFREIHLFLQ 295 (296)
T ss_pred cccccCCCccCCCHHHHHHHHHHhccChhcCCCHHHHHHHhc
Confidence 111112233456789999999999999999999999998875
|
Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke |
| >cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-38 Score=292.77 Aligned_cols=242 Identities=18% Similarity=0.273 Sum_probs=189.7
Q ss_pred CCCcccceeee------ecceecccccCCC--chhhhHHHHHHHHHhcCCCcCcceeEEEEEeC--CeeeEEEecCCCCC
Q 014478 2 GGRCSKFSICW------FHCHLKSSVLESS--DLGETLNLEEAKAVGNLRSERLANLIGCCYEA--DERLLVAEFMPNET 71 (424)
Q Consensus 2 G~~g~v~~~~~------~~~~v~~~~~~~~--~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~--~~~~lv~e~~~~gs 71 (424)
|++|.||.+.+ .+..+++|.+... ......+.+|+++++.++||||+++++++... ...++||||++|++
T Consensus 15 g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~~~g~~ 94 (284)
T cd05079 15 GHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGS 94 (284)
T ss_pred CCceeEEEEEEccCCCCccceEEEEEcCccccHHHHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCCceEEEEEccCCCC
Confidence 89999998864 3455677766533 23356788999999999999999999999875 56789999999999
Q ss_pred HHhHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCCC-------cc
Q 014478 72 LAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGK-------SY 144 (424)
Q Consensus 72 L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~~-------~~ 144 (424)
|.+++.. ....+++.+++.++.|++.||.|||+++ ++||||||+||+++.++.++|+|||+++...... ..
T Consensus 95 L~~~l~~-~~~~~~~~~~~~i~~~i~~aL~~lH~~g-i~H~dlkp~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~ 172 (284)
T cd05079 95 LKEYLPR-NKNKINLKQQLKYAVQICKGMDYLGSRQ-YVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEYYTVKDDL 172 (284)
T ss_pred HHHHHHh-ccCCCCHHHHHHHHHHHHHHHHHHHHCC-eeecccchheEEEcCCCCEEECCCccccccccCccceeecCCC
Confidence 9999864 2346899999999999999999999999 9999999999999999999999999988654321 23
Q ss_pred ccCccCCCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHH----------hhhhhhHhhhcccCCCCCchhH
Q 014478 145 STNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLI----------RSKNFLLLMDSALEGHFSNDEG 214 (424)
Q Consensus 145 ~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~ 214 (424)
.++..|+|||++.+..++.++|||||||++|+|+++..|......... .................+..++
T Consensus 173 ~~~~~y~apE~~~~~~~~~~~Di~slG~il~ellt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (284)
T cd05079 173 DSPVFWYAPECLIQSKFYIASDVWSFGVTLYELLTYCDSESSPMTLFLKMIGPTHGQMTVTRLVRVLEEGKRLPRPPNCP 252 (284)
T ss_pred CCCccccCHHHhccCCCCccccchhhhhhhhhhhcCCCCCccccchhhhhcccccccccHHHHHHHHHcCccCCCCCCCC
Confidence 456789999999888899999999999999999998754322100000 0001111111122223345578
Q ss_pred HHHHHHHHHhcccCcCCCCCHHHHHHHHHHH
Q 014478 215 TELVRLASRCLQSEARERPNAKSLVISLMSL 245 (424)
Q Consensus 215 ~~l~~li~~cl~~dp~~Rps~~~~~~~l~~~ 245 (424)
.++.+|+.+||+.||++|||+.+++..|+.+
T Consensus 253 ~~~~~li~~~l~~~p~~Rpt~~~il~~l~~~ 283 (284)
T cd05079 253 EEVYQLMRKCWEFQPSKRTTFQNLIEGFEAI 283 (284)
T ss_pred HHHHHHHHHHccCCcccCcCHHHHHHHHHhh
Confidence 8999999999999999999999999998764
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a |
| >cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-38 Score=294.97 Aligned_cols=242 Identities=21% Similarity=0.294 Sum_probs=195.8
Q ss_pred CCCcccceeeee------cceecccccCCCch--hhhHHHHHHHHHhcCCCcCcceeEEEEEe--CCeeeEEEecCCCCC
Q 014478 2 GGRCSKFSICWF------HCHLKSSVLESSDL--GETLNLEEAKAVGNLRSERLANLIGCCYE--ADERLLVAEFMPNET 71 (424)
Q Consensus 2 G~~g~v~~~~~~------~~~v~~~~~~~~~~--~~~~~~~E~~~l~~l~h~~iv~~~~~~~~--~~~~~lv~e~~~~gs 71 (424)
|++|.||.+.+. +..+++|++..... ....|.+|+++++.++||||+++++++.. +...+++|||+++++
T Consensus 15 g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~ei~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e~~~~~~ 94 (284)
T cd05038 15 GHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEILRTLDHENIVKYKGVCEKPGGRSLRLIMEYLPSGS 94 (284)
T ss_pred CCCeeEEEeeecCCCCCCceEEEEEEeccccchHHHHHHHHHHHHHHhCCCCChheEEeeeecCCCCceEEEEecCCCCC
Confidence 889999999874 45677887765554 36789999999999999999999999987 557899999999999
Q ss_pred HHhHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCCC-------cc
Q 014478 72 LAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGK-------SY 144 (424)
Q Consensus 72 L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~~-------~~ 144 (424)
|.+++.. ....+++..+..++.|++.||.|||+++ ++||||||+||+++.++.++|+|||++....... ..
T Consensus 95 l~~~l~~-~~~~~~~~~~~~~~~~l~~aL~~lH~~~-i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~ 172 (284)
T cd05038 95 LRDYLQR-HRDQINLKRLLLFSSQICKGMDYLGSQR-YIHRDLAARNILVESEDLVKISDFGLAKVLPEDKDYYYVKEPG 172 (284)
T ss_pred HHHHHHh-CccccCHHHHHHHHHHHHHHHHHHHhCC-eecCCCCHHhEEEcCCCCEEEcccccccccccCCcceeccCCC
Confidence 9999965 2335899999999999999999999999 9999999999999999999999999988765321 12
Q ss_pred ccCccCCCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHh----------hhhhhHhhhcccCCCCCchhH
Q 014478 145 STNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIR----------SKNFLLLMDSALEGHFSNDEG 214 (424)
Q Consensus 145 ~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~ 214 (424)
.++..|++||.+.+..++.++||||||+++|||++|..|+......... ................+..++
T Consensus 173 ~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (284)
T cd05038 173 ESPIFWYAPECLRTSKFSSASDVWSFGVTLYELFTYGDPSQSPPAEFLRMIGIAQGQMIVTRLLELLKEGERLPRPPSCP 252 (284)
T ss_pred CCcccccCcHHHccCCCCcccchHHHhhhhheeeccCCCcccccchhccccccccccccHHHHHHHHHcCCcCCCCccCC
Confidence 3356799999998888999999999999999999999776543211111 111222222233333445667
Q ss_pred HHHHHHHHHhcccCcCCCCCHHHHHHHHHHH
Q 014478 215 TELVRLASRCLQSEARERPNAKSLVISLMSL 245 (424)
Q Consensus 215 ~~l~~li~~cl~~dp~~Rps~~~~~~~l~~~ 245 (424)
.++.+++.+||..+|++|||+.++++.|..+
T Consensus 253 ~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~i 283 (284)
T cd05038 253 DEVYDLMKLCWEAEPQDRPSFADLILIVDRL 283 (284)
T ss_pred HHHHHHHHHHhccChhhCCCHHHHHHHHhhc
Confidence 8999999999999999999999999998764
|
Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut |
| >cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.7e-39 Score=306.65 Aligned_cols=233 Identities=18% Similarity=0.183 Sum_probs=186.3
Q ss_pred CCCcccceeee--ecceecccccCCCc----hhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHhH
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESSD----LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKH 75 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~~----~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~ 75 (424)
|++|.||.+.+ .+..+++|++.... .....+.+|+.+++.++||||+++++.+..+...++||||++||+|.++
T Consensus 54 G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~~~lv~Ey~~gg~L~~~ 133 (371)
T cd05622 54 GAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNL 133 (371)
T ss_pred cCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEEEEcCCCCCcHHHH
Confidence 89999999987 45567777664322 2345678899999999999999999999999999999999999999999
Q ss_pred hccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCC-----CccccCccC
Q 014478 76 LFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG-----KSYSTNLAF 150 (424)
Q Consensus 76 l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~-----~~~~gt~~y 150 (424)
+.. ..++...+..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++..... ....||+.|
T Consensus 134 ~~~---~~~~~~~~~~~~~qi~~aL~~LH~~~-ivHrDLkp~NIll~~~~~ikL~DfG~a~~~~~~~~~~~~~~~gt~~y 209 (371)
T cd05622 134 MSN---YDVPEKWARFYTAEVVLALDAIHSMG-FIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDY 209 (371)
T ss_pred HHh---cCCCHHHHHHHHHHHHHHHHHHHHCC-EEeCCCCHHHEEECCCCCEEEEeCCceeEcCcCCcccccCcccCccc
Confidence 853 46899999999999999999999999 999999999999999999999999998765432 245689999
Q ss_pred CCccccccC----CCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhc--ccCCCCCchhHHHHHHHHHHh
Q 014478 151 TPPEYMRTG----RVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDS--ALEGHFSNDEGTELVRLASRC 224 (424)
Q Consensus 151 ~aPE~~~~~----~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~li~~c 224 (424)
||||++.+. .++.++|||||||++|||++|..||...... .....+... .........++.++.++|.+|
T Consensus 210 ~aPE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~----~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~ 285 (371)
T cd05622 210 ISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLV----GTYSKIMNHKNSLTFPDDNDISKEAKNLICAF 285 (371)
T ss_pred cCHHHHhccCCCccCCCccceeehhHHHHHHHhCCCCCCCCCHH----HHHHHHHcCCCcccCCCcCCCCHHHHHHHHHH
Confidence 999998753 3788999999999999999999888764221 111112211 111122335788999999999
Q ss_pred cccCcCC--CCCHHHHHHHH
Q 014478 225 LQSEARE--RPNAKSLVISL 242 (424)
Q Consensus 225 l~~dp~~--Rps~~~~~~~l 242 (424)
|..++.+ |+++++++++.
T Consensus 286 L~~~~~r~~r~~~~ei~~h~ 305 (371)
T cd05622 286 LTDREVRLGRNGVEEIKRHL 305 (371)
T ss_pred cCChhhhcCCCCHHHHhcCc
Confidence 9844433 78999998875
|
Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an |
| >cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-39 Score=308.87 Aligned_cols=232 Identities=14% Similarity=0.133 Sum_probs=186.2
Q ss_pred CCCcccceeee--ecceecccccCCCc----hhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHhH
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESSD----LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKH 75 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~~----~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~ 75 (424)
|++|.||.+.. .+..+++|++.... .....+.+|+.++..++||||+++++.+.+++..++||||++||+|.++
T Consensus 12 G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~~~lv~E~~~gg~L~~~ 91 (360)
T cd05627 12 GAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADGAWVVKMFYSFQDKRNLYLIMEFLPGGDMMTL 91 (360)
T ss_pred CCCEEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEEeCCCCccHHHH
Confidence 89999999887 46677878775322 2345778899999999999999999999999999999999999999999
Q ss_pred hccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCC--------------
Q 014478 76 LFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG-------------- 141 (424)
Q Consensus 76 l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~-------------- 141 (424)
+.. ...+++..+..++.|++.||.|||+++ |+||||||+|||++.++.+||+|||+++.....
T Consensus 92 l~~--~~~l~~~~~~~~~~qi~~~L~~lH~~g-ivHrDLkp~NIli~~~~~vkL~DfG~~~~~~~~~~~~~~~~~~~~~~ 168 (360)
T cd05627 92 LMK--KDTLSEEATQFYIAETVLAIDAIHQLG-FIHRDIKPDNLLLDAKGHVKLSDFGLCTGLKKAHRTEFYRNLTHNPP 168 (360)
T ss_pred HHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC-eEccCCCHHHEEECCCCCEEEeeccCCcccccccccccccccccCCc
Confidence 864 457899999999999999999999999 999999999999999999999999998643211
Q ss_pred -------------------------CccccCccCCCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhh
Q 014478 142 -------------------------KSYSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKN 196 (424)
Q Consensus 142 -------------------------~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~ 196 (424)
....||+.|+|||++.+..++.++|||||||++|||++|..||........
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvilyel~tG~~Pf~~~~~~~~---- 244 (360)
T cd05627 169 SDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPFCSETPQET---- 244 (360)
T ss_pred ccccccccccccccccccccccccccccCCCccccCHHHHcCCCCCCcceeccccceeeecccCCCCCCCCCHHHH----
Confidence 123689999999999988999999999999999999999988865422111
Q ss_pred hhHhhhcccCCCCC--chhHHHHHHHHHHhcccCcCCCCC---HHHHHHH
Q 014478 197 FLLLMDSALEGHFS--NDEGTELVRLASRCLQSEARERPN---AKSLVIS 241 (424)
Q Consensus 197 ~~~~~~~~~~~~~~--~~~~~~l~~li~~cl~~dp~~Rps---~~~~~~~ 241 (424)
...+........++ ..+++++.++|.+|+. ||.+|++ +.+++.|
T Consensus 245 ~~~i~~~~~~~~~p~~~~~s~~~~~li~~l~~-~p~~R~~~~~~~ei~~h 293 (360)
T cd05627 245 YRKVMNWKETLVFPPEVPISEKAKDLILRFCT-DSENRIGSNGVEEIKSH 293 (360)
T ss_pred HHHHHcCCCceecCCCCCCCHHHHHHHHHhcc-ChhhcCCCCCHHHHhcC
Confidence 11111111111122 2357889999999774 9999985 6777655
|
Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul |
| >KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.5e-39 Score=287.76 Aligned_cols=235 Identities=19% Similarity=0.213 Sum_probs=197.5
Q ss_pred CCCcccceeeeec--ceecccccCCCchh----hhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHhH
Q 014478 2 GGRCSKFSICWFH--CHLKSSVLESSDLG----ETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKH 75 (424)
Q Consensus 2 G~~g~v~~~~~~~--~~v~~~~~~~~~~~----~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~ 75 (424)
|.-|.||.+...+ +..|.|++.+.... ..+..-|-++|..++||.++.+|..|+.++..|++||||+||+|..+
T Consensus 88 GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lDHPFlPTLYa~fet~~~~cl~meyCpGGdL~~L 167 (459)
T KOG0610|consen 88 GDIGTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSLLDHPFLPTLYASFETDKYSCLVMEYCPGGDLHSL 167 (459)
T ss_pred CCceeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhcCCCccchhhheeeccceeEEEEecCCCccHHHH
Confidence 6679999998744 67888888665433 34566799999999999999999999999999999999999999999
Q ss_pred hccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCC----------------
Q 014478 76 LFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSR---------------- 139 (424)
Q Consensus 76 l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~---------------- 139 (424)
+++..+..+++..+.-++.+|+.||+|||-.| ||+|||||+|||+.++|++-|+||.++....
T Consensus 168 rqkQp~~~fse~~aRFYaAEvl~ALEYLHmlG-ivYRDLKPENILvredGHIMLsDFDLS~~~~~~Pt~~~s~~~~~~~~ 246 (459)
T KOG0610|consen 168 RQKQPGKRFSESAARFYAAEVLLALEYLHMLG-IVYRDLKPENILVREDGHIMLSDFDLSLRCPVSPTLVKSSSPRSSGS 246 (459)
T ss_pred HhhCCCCccchhhHHHHHHHHHHHHHHHHhhc-eeeccCCcceeEEecCCcEEeeeccccccCCCCCeeeccCCCCCCCC
Confidence 98877888999999999999999999999999 9999999999999999999999999854210
Q ss_pred --------------------C------------------------CCccccCccCCCccccccCCCCCCcceehhHHHHH
Q 014478 140 --------------------D------------------------GKSYSTNLAFTPPEYMRTGRVTPESVVYSFGTMLL 175 (424)
Q Consensus 140 --------------------~------------------------~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~ 175 (424)
. +.+++||-.|.|||++.+...+.+.|.|+|||++|
T Consensus 247 ~~~~~~~~~s~f~~r~~~~~~~~~k~~~~~~~~~p~~~aep~~~RSnSFVGThEYlAPEvI~G~GHgsAVDWWtfGIflY 326 (459)
T KOG0610|consen 247 QPSCRSRQPSCFSPRCLSSSKKRKKKDESASRSLPELVAEPTGARSNSFVGTHEYLAPEVIRGEGHGSAVDWWTFGIFLY 326 (459)
T ss_pred CcccccccccccccchhccccccccccccccccchhhhcCCCCccccccccccccccceeeecCCCCchhhHHHHHHHHH
Confidence 0 01234788899999999999999999999999999
Q ss_pred HHhhCCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHHHHHHHHHhcccCcCCCCC----HHHHHHH
Q 014478 176 DLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERPN----AKSLVIS 241 (424)
Q Consensus 176 el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps----~~~~~~~ 241 (424)
||+.|..||.+.. .+..+..++......+..+.++..+++||+++|.+||.+|.. +.||.+|
T Consensus 327 EmLyG~TPFKG~~----~~~Tl~NIv~~~l~Fp~~~~vs~~akDLIr~LLvKdP~kRlg~~rGA~eIK~H 392 (459)
T KOG0610|consen 327 EMLYGTTPFKGSN----NKETLRNIVGQPLKFPEEPEVSSAAKDLIRKLLVKDPSKRLGSKRGAAEIKRH 392 (459)
T ss_pred HHHhCCCCcCCCC----chhhHHHHhcCCCcCCCCCcchhHHHHHHHHHhccChhhhhccccchHHhhcC
Confidence 9999999999863 334444455444444444467889999999999999999987 7777654
|
|
| >cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-38 Score=296.92 Aligned_cols=233 Identities=17% Similarity=0.241 Sum_probs=190.5
Q ss_pred CCCcccceeee--ecceecccccCCCc-hhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHhHhcc
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESSD-LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFH 78 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~ 78 (424)
|++|.||.+.+ .+..+++|.+.... ...+.+.+|+.+++.+.||||+++++.+..+...++||||+++++|.+++.
T Consensus 31 g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~v~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~- 109 (296)
T cd06654 31 GASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVT- 109 (296)
T ss_pred CCCeEEEEEEECCCCcEEEEEEEecCCcchHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEeecccCCCCHHHHHH-
Confidence 78999999986 45667777665433 335678899999999999999999999999999999999999999999984
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCC----CccccCccCCCcc
Q 014478 79 WETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG----KSYSTNLAFTPPE 154 (424)
Q Consensus 79 ~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~----~~~~gt~~y~aPE 154 (424)
...+++.++..++.|++.||.|||+++ ++||||||+||+++.++.++|+|||++...... ....+++.|+|||
T Consensus 110 --~~~~~~~~~~~i~~ql~~aL~~LH~~g-i~H~dLkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE 186 (296)
T cd06654 110 --ETCMDEGQIAAVCRECLQALEFLHSNQ-VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPE 186 (296)
T ss_pred --hcCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCCHHHEEEcCCCCEEECccccchhccccccccCcccCCccccCHH
Confidence 346899999999999999999999999 999999999999999999999999998754432 2346788999999
Q ss_pred ccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHHHHHHHHHhcccCcCCCCC
Q 014478 155 YMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERPN 234 (424)
Q Consensus 155 ~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps 234 (424)
.+.+..++.++|||||||++|+|++|+.||....... ...............+...+..+.+++.+||..||++||+
T Consensus 187 ~~~~~~~~~~~Dv~s~Gvil~~l~~g~~pf~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt 263 (296)
T cd06654 187 VVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLR---ALYLIATNGTPELQNPEKLSAIFRDFLNRCLDMDVEKRGS 263 (296)
T ss_pred HHcCCCCCccchHHHHHHHHHHHHhCCCCCCCCCHHH---hHHHHhcCCCCCCCCccccCHHHHHHHHHHCcCCcccCcC
Confidence 9998888999999999999999999998876532110 0011111111122234456788999999999999999999
Q ss_pred HHHHHHH
Q 014478 235 AKSLVIS 241 (424)
Q Consensus 235 ~~~~~~~ 241 (424)
+.+++.+
T Consensus 264 ~~eil~~ 270 (296)
T cd06654 264 AKELLQH 270 (296)
T ss_pred HHHHhhC
Confidence 9999864
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding |
| >cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-38 Score=294.68 Aligned_cols=236 Identities=20% Similarity=0.269 Sum_probs=189.4
Q ss_pred CCCcccceeeee-------cceecccccCCCc--hhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCH
Q 014478 2 GGRCSKFSICWF-------HCHLKSSVLESSD--LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETL 72 (424)
Q Consensus 2 G~~g~v~~~~~~-------~~~v~~~~~~~~~--~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL 72 (424)
||+|.||.+.+. ...+++|++.... .....|.+|+.++.+++||||+++++++..+...++||||+++|+|
T Consensus 16 g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~ei~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L 95 (288)
T cd05050 16 GAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDHPNIVKLLGVCAVGKPMCLLFEYMAYGDL 95 (288)
T ss_pred cccccEEEEEEcccCCCCcceeEEEEecCCCcCHHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCccEEEEecCCCCCH
Confidence 899999998763 3556666665432 3456789999999999999999999999999999999999999999
Q ss_pred HhHhccCC--------------------CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccc
Q 014478 73 AKHLFHWE--------------------TQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSF 132 (424)
Q Consensus 73 ~~~l~~~~--------------------~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Df 132 (424)
.+++.... ...+++.+++.++.|++.||.|||+++ ++||||||+||+++.++.++|+||
T Consensus 96 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~~~-i~H~dl~p~nil~~~~~~~~l~df 174 (288)
T cd05050 96 NEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSERK-FVHRDLATRNCLVGENMVVKIADF 174 (288)
T ss_pred HHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCC-eecccccHhheEecCCCceEECcc
Confidence 99986321 134788899999999999999999999 999999999999999999999999
Q ss_pred cccccCCCC------CccccCccCCCccccccCCCCCCcceehhHHHHHHHhh-CCCCCCchhhHHHhhhhhhHhhhccc
Q 014478 133 GLMKNSRDG------KSYSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKNFLLLMDSAL 205 (424)
Q Consensus 133 g~~~~~~~~------~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (424)
|+++..... .....+..|+|||.+.+..++.++|||||||++|||++ |..||....... .........
T Consensus 175 g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~~~~p~~~~~~~~-----~~~~~~~~~ 249 (288)
T cd05050 175 GLSRNIYSADYYKASENDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGMQPYYGMAHEE-----VIYYVRDGN 249 (288)
T ss_pred ccceecccCccccccCCCccChhhcCHHHHhcCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCHHH-----HHHHHhcCC
Confidence 998754322 12234567999999988889999999999999999997 766665432111 111111222
Q ss_pred CCCCCchhHHHHHHHHHHhcccCcCCCCCHHHHHHHHH
Q 014478 206 EGHFSNDEGTELVRLASRCLQSEARERPNAKSLVISLM 243 (424)
Q Consensus 206 ~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~~~~~l~ 243 (424)
....+..++.++.+++.+||+.||++|||+.|+++.|+
T Consensus 250 ~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~el~~~l~ 287 (288)
T cd05050 250 VLSCPDNCPLELYNLMRLCWSKLPSDRPSFASINRILQ 287 (288)
T ss_pred CCCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHhh
Confidence 22335567789999999999999999999999998876
|
Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M |
| >cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-38 Score=293.73 Aligned_cols=239 Identities=18% Similarity=0.219 Sum_probs=188.9
Q ss_pred CCCcccceeeee-------cceecccccCCCc--hhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCH
Q 014478 2 GGRCSKFSICWF-------HCHLKSSVLESSD--LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETL 72 (424)
Q Consensus 2 G~~g~v~~~~~~-------~~~v~~~~~~~~~--~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL 72 (424)
|++|.||.+.+. +..+++|.+.... .....+.+|+.+++.++||||+++++++..+...++||||+++|+|
T Consensus 17 G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~g~L 96 (288)
T cd05061 17 GSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDL 96 (288)
T ss_pred CCCcEEEEEEEeccCCCCcceEEEEEECCCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCcEEEEeCCCCCCH
Confidence 899999998653 2356666654333 2345688899999999999999999999998899999999999999
Q ss_pred HhHhccCC--------CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCC---
Q 014478 73 AKHLFHWE--------TQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG--- 141 (424)
Q Consensus 73 ~~~l~~~~--------~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~--- 141 (424)
.+++.... ....+...+.+++.|++.||.|||+++ ++||||||+||+++.++.++|+|||+++.....
T Consensus 97 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~-i~H~dikp~nili~~~~~~~L~Dfg~~~~~~~~~~~ 175 (288)
T cd05061 97 KSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKK-FVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYY 175 (288)
T ss_pred HHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCC-CcCCCCChheEEEcCCCcEEECcCCccccccccccc
Confidence 99996421 134567788999999999999999999 999999999999999999999999998754322
Q ss_pred ---CccccCccCCCccccccCCCCCCcceehhHHHHHHHhh-CCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHHH
Q 014478 142 ---KSYSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTEL 217 (424)
Q Consensus 142 ---~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 217 (424)
....++..|+|||.+.++.++.++|||||||++|||++ |..|+...... .....+........+..+++.+
T Consensus 176 ~~~~~~~~~~~y~~pE~~~~~~~~~~~DvwslG~~l~el~~~~~~p~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~ 250 (288)
T cd05061 176 RKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNE-----QVLKFVMDGGYLDQPDNCPERV 250 (288)
T ss_pred cccCCCcccccccCHHHhccCCCChHhHHHHHHHHHHHHHhCCCCCCCCCCHH-----HHHHHHHcCCCCCCCCCCCHHH
Confidence 12234678999999998889999999999999999998 56565442111 1111111111223345567899
Q ss_pred HHHHHHhcccCcCCCCCHHHHHHHHHHHh
Q 014478 218 VRLASRCLQSEARERPNAKSLVISLMSLQ 246 (424)
Q Consensus 218 ~~li~~cl~~dp~~Rps~~~~~~~l~~~~ 246 (424)
.+++.+||+.||++|||+.++++.|....
T Consensus 251 ~~li~~~l~~~p~~Rps~~~ll~~l~~~~ 279 (288)
T cd05061 251 TDLMRMCWQFNPKMRPTFLEIVNLLKDDL 279 (288)
T ss_pred HHHHHHHcCCChhHCcCHHHHHHHHHhhc
Confidence 99999999999999999999998887654
|
Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta |
| >cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-38 Score=291.66 Aligned_cols=239 Identities=18% Similarity=0.173 Sum_probs=179.5
Q ss_pred CCCcccceeeeec----ceecccccCCC--chhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHhH
Q 014478 2 GGRCSKFSICWFH----CHLKSSVLESS--DLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKH 75 (424)
Q Consensus 2 G~~g~v~~~~~~~----~~v~~~~~~~~--~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~ 75 (424)
|+||.||.+.+.. ..++++.+... ......|.+|+.+++.++||||+++++.|......++||||+++|+|.++
T Consensus 6 G~fg~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~nii~~~~~~~~~~~~~lv~e~~~~g~L~~~ 85 (269)
T cd05042 6 GWFGKVLLGEAHRGMSKARVVVKELRASATPDEQLLFLQEVQPYRELNHPNVLQCLGQCIESIPYLLVLEFCPLGDLKNY 85 (269)
T ss_pred cCCceEEEEEEecCCCCeEEEEeecCccCChHHHHHHHHHHHHHHhCCCCCcceEEEEECCCCceEEEEEeCCCCcHHHH
Confidence 8999999987532 23444444322 23345788999999999999999999999999999999999999999999
Q ss_pred hccCC---CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCC------Ccccc
Q 014478 76 LFHWE---TQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG------KSYST 146 (424)
Q Consensus 76 l~~~~---~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~------~~~~g 146 (424)
+.... ....++..+..++.|++.||.|||+++ ++||||||+|||++.++.+||+|||+++..... ....+
T Consensus 86 l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~-ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~ 164 (269)
T cd05042 86 LRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQAD-FIHSDLALRNCQLTADLSVKIGDYGLALEQYPEDYYITKDCHAV 164 (269)
T ss_pred HHhccccccccccHHHHHHHHHHHHHHHHHHHhcC-EecccccHhheEecCCCcEEEeccccccccccchheeccCCCCC
Confidence 86532 123467888999999999999999999 999999999999999999999999998753322 12235
Q ss_pred CccCCCcccccc-------CCCCCCcceehhHHHHHHHhh-CCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHHHH
Q 014478 147 NLAFTPPEYMRT-------GRVTPESVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELV 218 (424)
Q Consensus 147 t~~y~aPE~~~~-------~~~~~~~Dv~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 218 (424)
+..|+|||++.. ..++.++|||||||++|||++ |..|+.........................+..++..+.
T Consensus 165 ~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (269)
T cd05042 165 PLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTAADQPYPDLSDEQVLKQVVREQDIKLPKPQLDLKYSDRWY 244 (269)
T ss_pred cccccCHHHHhhccccccccccchhhHHHHHHHHHHHHHhCCCCCCCcCCHHHHHHHHhhccCccCCCCcccccCCHHHH
Confidence 677999998753 346789999999999999999 565655431111111111111111112223445678889
Q ss_pred HHHHHhcccCcCCCCCHHHHHHHH
Q 014478 219 RLASRCLQSEARERPNAKSLVISL 242 (424)
Q Consensus 219 ~li~~cl~~dp~~Rps~~~~~~~l 242 (424)
+++..|| .||++|||+++|++.|
T Consensus 245 ~~~~~~~-~dp~~Rpt~~~v~~~l 267 (269)
T cd05042 245 EVMQFCW-LDPETRPTAEEVHELL 267 (269)
T ss_pred HHHHHHh-cCcccccCHHHHHHHh
Confidence 9999999 5999999999999876
|
Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina |
| >cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-38 Score=288.91 Aligned_cols=240 Identities=15% Similarity=0.132 Sum_probs=178.8
Q ss_pred CCCcccceeeeecc-e---ecccccCC--CchhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHhH
Q 014478 2 GGRCSKFSICWFHC-H---LKSSVLES--SDLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKH 75 (424)
Q Consensus 2 G~~g~v~~~~~~~~-~---v~~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~ 75 (424)
|+||.||.+.+... . ++++.+.. .....+.|.+|+.+++.++||||+++++.|......++||||+++|+|.++
T Consensus 6 G~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~ 85 (268)
T cd05086 6 GWFGKVLLSEIYTDTGVARVVVKELKANASSKEQNEFLQQGDPYRILQHPNILQCLGQCVEAIPYLLVFEYCELGDLKSY 85 (268)
T ss_pred CcCceEEEEEEEcCCCcceEEEEEecCCCChHHHHHHHHHHHHHhccCCcchhheEEEecCCCccEEEEecCCCCcHHHH
Confidence 89999999876332 2 22333322 223457899999999999999999999999999899999999999999999
Q ss_pred hccCC--CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCC------CCCccccC
Q 014478 76 LFHWE--TQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSR------DGKSYSTN 147 (424)
Q Consensus 76 l~~~~--~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~------~~~~~~gt 147 (424)
+.... ...++...+..++.||+.||.|||+++ ++||||||+|||++.++.++|+|||++.... ......++
T Consensus 86 l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~-i~H~dikp~nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~ 164 (268)
T cd05086 86 LSQEQWHRRNSQLLLLQRMACEIAAGVTHMHKHN-FLHSDLALRNCFLTSDLTVKVGDYGIGPSRYKEDYIETEDDKCVP 164 (268)
T ss_pred HHhhhcccccccHHHHHHHHHHHHHHHHHHHHCC-eeccCCccceEEEcCCccEEecccccccccCcchhhhcccCCcCc
Confidence 86421 234667788899999999999999999 9999999999999999999999999876422 12234578
Q ss_pred ccCCCcccccc-------CCCCCCcceehhHHHHHHHhhCC-CCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHHHHH
Q 014478 148 LAFTPPEYMRT-------GRVTPESVVYSFGTMLLDLLSGK-HIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVR 219 (424)
Q Consensus 148 ~~y~aPE~~~~-------~~~~~~~Dv~slG~~l~el~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 219 (424)
..|+|||++.. ..++.++|||||||++|||+++. .|+.........................+...++.+.+
T Consensus 165 ~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (268)
T cd05086 165 LRWLAPELVGEFHGGLITAEQTKPSNVWALGVTLWELFENAAQPYSHLSDREVLNHVIKDQQVKLFKPQLELPYSERWYE 244 (268)
T ss_pred ccccCchhcccccCccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhhcccccCCCccCCCCcHHHHH
Confidence 89999998753 23577999999999999999754 44433211110000000000111222334456788999
Q ss_pred HHHHhcccCcCCCCCHHHHHHHHH
Q 014478 220 LASRCLQSEARERPNAKSLVISLM 243 (424)
Q Consensus 220 li~~cl~~dp~~Rps~~~~~~~l~ 243 (424)
++..|| .+|++||+++++++.|.
T Consensus 245 l~~~c~-~~P~~Rp~~~~i~~~l~ 267 (268)
T cd05086 245 VLQFCW-LSPEKRATAEEVHRLLT 267 (268)
T ss_pred HHHHHh-hCcccCCCHHHHHHHhc
Confidence 999999 68999999999987763
|
Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage |
| >cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-39 Score=305.71 Aligned_cols=232 Identities=17% Similarity=0.154 Sum_probs=183.6
Q ss_pred CCCcccceeee--ecceecccccCCCc----hhhhHHHHHHHHHhcC---CCcCcceeEEEEEeCCeeeEEEecCCCCCH
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESSD----LGETLNLEEAKAVGNL---RSERLANLIGCCYEADERLLVAEFMPNETL 72 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~~----~~~~~~~~E~~~l~~l---~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL 72 (424)
|+||.||.+.+ .+..+++|++.... .....+..|..++..+ .||||+++++++..+...++||||+++|+|
T Consensus 4 G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~~~~~~lv~e~~~~g~L 83 (330)
T cd05586 4 GTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQTDSDLYLVTDYMSGGEL 83 (330)
T ss_pred CCceEEEEEEECCCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEecCCeEEEEEcCCCCChH
Confidence 89999999987 46778888775432 1233455677777665 699999999999999999999999999999
Q ss_pred HhHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCC----CCccccCc
Q 014478 73 AKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRD----GKSYSTNL 148 (424)
Q Consensus 73 ~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~----~~~~~gt~ 148 (424)
.+++.. ...+++..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++.... .....||.
T Consensus 84 ~~~l~~--~~~~~~~~~~~~~~qil~al~~LH~~~-ivHrDlkp~Nili~~~~~~kl~Dfg~a~~~~~~~~~~~~~~gt~ 160 (330)
T cd05586 84 FWHLQK--EGRFSEDRAKFYIAELVLALEHLHKYD-IVYRDLKPENILLDATGHIALCDFGLSKANLTDNKTTNTFCGTT 160 (330)
T ss_pred HHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC-eEeccCCHHHeEECCCCCEEEecCCcCcCCCCCCCCccCccCCc
Confidence 999864 467899999999999999999999999 99999999999999999999999999875322 23456899
Q ss_pred cCCCccccccC-CCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHHHHHHHHHhccc
Q 014478 149 AFTPPEYMRTG-RVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQS 227 (424)
Q Consensus 149 ~y~aPE~~~~~-~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~ 227 (424)
.|+|||++.+. .++.++|||||||++|+|++|..||.......... .+..... ......++.++.+++.+||..
T Consensus 161 ~y~aPE~~~~~~~~~~~~DvwslGvil~elltG~~Pf~~~~~~~~~~----~i~~~~~-~~~~~~~~~~~~~li~~~L~~ 235 (330)
T cd05586 161 EYLAPEVLLDEKGYTKHVDFWSLGVLVFEMCCGWSPFYAEDTQQMYR----NIAFGKV-RFPKNVLSDEGRQFVKGLLNR 235 (330)
T ss_pred cccCHHHHcCCCCCCCccceeccccEEEEeccCCCCCCCCCHHHHHH----HHHcCCC-CCCCccCCHHHHHHHHHHcCC
Confidence 99999998765 47899999999999999999998887642221111 1111111 111223578899999999999
Q ss_pred CcCCCC----CHHHHHHH
Q 014478 228 EARERP----NAKSLVIS 241 (424)
Q Consensus 228 dp~~Rp----s~~~~~~~ 241 (424)
||++|| ++.+++++
T Consensus 236 ~P~~R~~~~~~~~~ll~h 253 (330)
T cd05586 236 NPQHRLGAHRDAVELKEH 253 (330)
T ss_pred CHHHCCCCCCCHHHHhcC
Confidence 999998 56676654
|
Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of |
| >cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-38 Score=292.67 Aligned_cols=234 Identities=16% Similarity=0.208 Sum_probs=187.9
Q ss_pred CCCcccceeeee--cceecccccCCC-chhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHhHhcc
Q 014478 2 GGRCSKFSICWF--HCHLKSSVLESS-DLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFH 78 (424)
Q Consensus 2 G~~g~v~~~~~~--~~~v~~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~ 78 (424)
|++|.||++.+. +..++++.+... ......+.+|+++++.++||||+++++++..++..++||||+++++|..++.+
T Consensus 16 g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~~v~e~~~~~~l~~~~~~ 95 (282)
T cd06643 16 GAFGKVYKAQNKETGVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLE 95 (282)
T ss_pred CCCeEEEEEEECCCCeEEEEEEeCCCCHHHHHHHHHHHHHHHHCCCCCeeeEEEEEeeCCEEEEEEEecCCCcHHHHHHh
Confidence 789999999884 444555655433 34466788999999999999999999999999999999999999999998754
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCC----CccccCccCCCcc
Q 014478 79 WETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG----KSYSTNLAFTPPE 154 (424)
Q Consensus 79 ~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~----~~~~gt~~y~aPE 154 (424)
...++++..+..++.|++.||.|||+.+ ++||||||+||+++.++.++|+|||++...... ....++..|+|||
T Consensus 96 -~~~~l~~~~~~~~~~qi~~~L~~LH~~~-i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE 173 (282)
T cd06643 96 -LERPLTEPQIRVVCKQTLEALNYLHENK-IIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRDSFIGTPYWMAPE 173 (282)
T ss_pred -cCCCCCHHHHHHHHHHHHHHHHHHHHCC-eeecCCCcccEEEccCCCEEEccccccccccccccccccccccccccCHh
Confidence 3457999999999999999999999999 999999999999999999999999998754322 3346789999999
Q ss_pred ccc-----cCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhc-ccCCCCCchhHHHHHHHHHHhcccC
Q 014478 155 YMR-----TGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDS-ALEGHFSNDEGTELVRLASRCLQSE 228 (424)
Q Consensus 155 ~~~-----~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~li~~cl~~d 228 (424)
++. +..++.++|||||||++|+|++|+.||..... .......... ......+..++.++.++|.+||..|
T Consensus 174 ~~~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~ 249 (282)
T cd06643 174 VVMCETSKDRPYDYKADVWSLGITLIEMAQIEPPHHELNP----MRVLLKIAKSEPPTLAQPSRWSSEFKDFLKKCLEKN 249 (282)
T ss_pred hccccCCCCCCCCccchhhhHHHHHHHHccCCCCccccCH----HHHHHHHhhcCCCCCCCccccCHHHHHHHHHHccCC
Confidence 984 34578899999999999999999977654311 1111111111 1112234456789999999999999
Q ss_pred cCCCCCHHHHHHH
Q 014478 229 ARERPNAKSLVIS 241 (424)
Q Consensus 229 p~~Rps~~~~~~~ 241 (424)
|.+||++.+++.+
T Consensus 250 p~~Rp~~~~il~~ 262 (282)
T cd06643 250 VDARWTTTQLLQH 262 (282)
T ss_pred hhhCcCHHHHhcC
Confidence 9999999999855
|
Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration. |
| >KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.2e-39 Score=285.00 Aligned_cols=238 Identities=17% Similarity=0.185 Sum_probs=189.3
Q ss_pred CCCcccceeee--ecceecccccCCCch---hhhHHHHHHHHHhcCCCcC-cceeEEEEEeCC------eeeEEEecCCC
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESSDL---GETLNLEEAKAVGNLRSER-LANLIGCCYEAD------ERLLVAEFMPN 69 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~~~---~~~~~~~E~~~l~~l~h~~-iv~~~~~~~~~~------~~~lv~e~~~~ 69 (424)
|.+|.||++.. .+..|+.|++.-+.. ......+|+.+|+.|+|+| |+++++++...+ ..++|+||++.
T Consensus 22 Gtyg~Vykar~~~~g~~VALKkirl~~~~EG~P~taiREisllk~L~~~~~iv~L~dv~~~~~~~~~~~~l~lvfe~~d~ 101 (323)
T KOG0594|consen 22 GTYGVVYKARSKRTGKFVALKKIRLEFEEEGVPSTAIREISLLKRLSHANHIVRLHDVIHTSNNHRGIGKLYLVFEFLDR 101 (323)
T ss_pred CCceEEEEEEEecCCCEEEEEEEeccccccCCCchhhHHHHHHHHhCCCcceEEEEeeeeecccccccceEEEEEEeecc
Confidence 78999999987 566788887754433 2456689999999999999 999999998877 78899999976
Q ss_pred CCHHhHhccCCC--CCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCC----Cc
Q 014478 70 ETLAKHLFHWET--QPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG----KS 143 (424)
Q Consensus 70 gsL~~~l~~~~~--~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~----~~ 143 (424)
+|..++..... ..++...+..++.||+.||+|||+++ |+||||||.|||++.+|.+||+|||+++...-. ..
T Consensus 102 -DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~~H~~~-IlHRDLKPQNlLi~~~G~lKlaDFGlAra~~ip~~~yt~ 179 (323)
T KOG0594|consen 102 -DLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAFLHSHG-ILHRDLKPQNLLISSSGVLKLADFGLARAFSIPMRTYTP 179 (323)
T ss_pred -cHHHHHHhccccccCCCHHHHHHHHHHHHHHHHHHHhCC-eecccCCcceEEECCCCcEeeeccchHHHhcCCcccccc
Confidence 99999976432 46888999999999999999999999 999999999999999999999999999866522 34
Q ss_pred cccCccCCCccccccC-CCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhc----------------ccC
Q 014478 144 YSTNLAFTPPEYMRTG-RVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDS----------------ALE 206 (424)
Q Consensus 144 ~~gt~~y~aPE~~~~~-~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~----------------~~~ 206 (424)
..+|..|.|||++.+. .|+...||||+||++.||++++..|++.+....-...+..+-.+ ...
T Consensus 180 evvTlWYRaPEvLlGs~~Ys~~vDiWs~GcIfaEm~~~~~LFpG~se~~ql~~If~~lGtP~e~~Wp~v~~~~~~k~~f~ 259 (323)
T KOG0594|consen 180 EVVTLWYRAPEVLLGSTSYSTSVDIWSLGCIFAEMFTRRPLFPGDSEIDQLFRIFRLLGTPNEKDWPGVSSLPDYKAPFP 259 (323)
T ss_pred cEEEeeccCHHHhcCCCcCCCCcchHhHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHcCCCCccCCCCccccccccccCc
Confidence 5678999999999976 59999999999999999999999998863321111111110000 000
Q ss_pred CCC-Cchh-------HHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 014478 207 GHF-SNDE-------GTELVRLASRCLQSEARERPNAKSLVIS 241 (424)
Q Consensus 207 ~~~-~~~~-------~~~l~~li~~cl~~dp~~Rps~~~~~~~ 241 (424)
... +..+ .++..+++.+||+.+|.+|.|++.++.|
T Consensus 260 ~~~~~~~l~~~~~~~~~~~~dll~~~L~y~p~~R~Sa~~al~h 302 (323)
T KOG0594|consen 260 KWPGPKDLSSILPKLDPDGIELLSKLLQYDPAKRISAKGALTH 302 (323)
T ss_pred CCCCccchHHhccccCccHHHHHHHHhccCcccCcCHHHHhcC
Confidence 000 1111 2478999999999999999999999976
|
|
| >cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-38 Score=292.45 Aligned_cols=234 Identities=16% Similarity=0.203 Sum_probs=187.1
Q ss_pred CCCcccceeee--ecceecccccCCCc-hhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHhHhcc
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESSD-LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFH 78 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~ 78 (424)
|++|.||++.+ .+..+++|++.... .....+.+|+.++++++||||+++++++..+...++||||+++++|.+++..
T Consensus 20 g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~~e~~~l~~~~h~~ii~~~~~~~~~~~~~iv~e~~~~~~L~~~~~~ 99 (267)
T cd06646 20 GTYGDVYKARNLHTGELAAVKIIKLEPGDDFSLIQQEIFMVKECKHCNIVAYFGSYLSREKLWICMEYCGGGSLQDIYHV 99 (267)
T ss_pred CCCeEEEEEEECCCCeEEEEEEEecCccchHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEEEEEEeCCCCCcHHHHHHh
Confidence 88999999987 45567777765433 3345678899999999999999999999999999999999999999999864
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCC----CccccCccCCCcc
Q 014478 79 WETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG----KSYSTNLAFTPPE 154 (424)
Q Consensus 79 ~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~----~~~~gt~~y~aPE 154 (424)
..++++.++..++.|++.||.|||+.+ ++||||||+||+++.++.++|+|||+++..... ....++..|+|||
T Consensus 100 --~~~~~~~~~~~~~~qi~~~l~~lH~~~-i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~~PE 176 (267)
T cd06646 100 --TGPLSELQIAYVCRETLQGLAYLHSKG-KMHRDIKGANILLTDNGDVKLADFGVAAKITATIAKRKSFIGTPYWMAPE 176 (267)
T ss_pred --cCCCCHHHHHHHHHHHHHHHHHHHHCC-ccccCCCHHHEEECCCCCEEECcCccceeecccccccCccccCccccCHh
Confidence 457899999999999999999999999 999999999999999999999999998765422 2346788999999
Q ss_pred ccc---cCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhcccC---CCCCchhHHHHHHHHHHhcccC
Q 014478 155 YMR---TGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALE---GHFSNDEGTELVRLASRCLQSE 228 (424)
Q Consensus 155 ~~~---~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~l~~li~~cl~~d 228 (424)
.+. ...++.++|+|||||++|||++|+.|+..... . ............ ...+..++..+.+++.+||..|
T Consensus 177 ~~~~~~~~~~~~~~Dvws~G~il~el~~g~~p~~~~~~--~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~ 252 (267)
T cd06646 177 VAAVEKNGGYNQLCDIWAVGITAIELAELQPPMFDLHP--M--RALFLMSKSNFQPPKLKDKTKWSSTFHNFVKISLTKN 252 (267)
T ss_pred HcccccCCCCcchhhHHHHHHHHHHHHhCCCCccccch--h--hhheeeecCCCCCCCCccccccCHHHHHHHHHHhhCC
Confidence 885 34578899999999999999999977643211 0 000000011111 1112345788999999999999
Q ss_pred cCCCCCHHHHHHHH
Q 014478 229 ARERPNAKSLVISL 242 (424)
Q Consensus 229 p~~Rps~~~~~~~l 242 (424)
|++|||++++++++
T Consensus 253 P~~Rp~~~~il~~l 266 (267)
T cd06646 253 PKKRPTAERLLTHL 266 (267)
T ss_pred hhhCcCHHHHhcCC
Confidence 99999999998764
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated |
| >KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-40 Score=286.66 Aligned_cols=233 Identities=15% Similarity=0.197 Sum_probs=198.1
Q ss_pred CCCcccceeee--ecceecccccCCCchhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHhHhccC
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESSDLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHW 79 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~ 79 (424)
|++|+||++.. .+..+++|.+... .+.+.+..|+.+|++++.|++|++||.+.....+|||||||-.|+..+.++-
T Consensus 44 GSYGSV~KAIH~EsG~v~AIK~VPV~-sDLQEIIKEISIMQQC~S~yVVKYYGSYFK~sDLWIVMEYCGAGSiSDI~R~- 121 (502)
T KOG0574|consen 44 GSYGSVHKAIHRESGHVLAIKKVPVD-TDLQEIIKEISIMQQCKSKYVVKYYGSYFKHSDLWIVMEYCGAGSISDIMRA- 121 (502)
T ss_pred CcchHHHHHHHhccCcEEEEEecCcc-chHHHHHHHHHHHHHcCCchhhhhhhhhccCCceEeehhhcCCCcHHHHHHH-
Confidence 89999999987 5667777665443 4567899999999999999999999999999999999999999999999865
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCC----CccccCccCCCccc
Q 014478 80 ETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG----KSYSTNLAFTPPEY 155 (424)
Q Consensus 80 ~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~----~~~~gt~~y~aPE~ 155 (424)
.+.++++.++..+++..++||+|||... -||||||..|||++.+|.+||+|||.+....+. ....||+.|||||+
T Consensus 122 R~K~L~E~EIs~iL~~TLKGL~YLH~~~-KIHRDIKAGNILLNT~G~AKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEV 200 (502)
T KOG0574|consen 122 RRKPLSEQEISAVLRDTLKGLQYLHDLK-KIHRDIKAGNILLNTDGIAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEV 200 (502)
T ss_pred hcCCccHHHHHHHHHHHHhHHHHHHHHH-HHHhhcccccEEEcccchhhhhhccccchhhhhHHhhCccccCcccccHHH
Confidence 5678999999999999999999999998 899999999999999999999999998876643 45679999999999
Q ss_pred cccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhh--hcccCCCCCchhHHHHHHHHHHhcccCcCCCC
Q 014478 156 MRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLM--DSALEGHFSNDEGTELVRLASRCLQSEARERP 233 (424)
Q Consensus 156 ~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rp 233 (424)
+..-.|++++||||||++..||..|++|+..- ........+ .+......|..++.++-+|++.||.+.|++|-
T Consensus 201 I~EIGY~~~ADIWSLGITaIEMAEG~PPYsDI-----HPMRAIFMIPT~PPPTF~KPE~WS~~F~DFi~~CLiK~PE~R~ 275 (502)
T KOG0574|consen 201 IEEIGYDTKADIWSLGITAIEMAEGRPPYSDI-----HPMRAIFMIPTKPPPTFKKPEEWSSEFNDFIRSCLIKKPEERK 275 (502)
T ss_pred HHHhccchhhhHhhhcchhhhhhcCCCCcccc-----cccceeEeccCCCCCCCCChHhhhhHHHHHHHHHhcCCHHHHH
Confidence 99889999999999999999999999665431 111111122 22233345677899999999999999999999
Q ss_pred CHHHHHHHH
Q 014478 234 NAKSLVISL 242 (424)
Q Consensus 234 s~~~~~~~l 242 (424)
|+-.+++|-
T Consensus 276 TA~~L~~H~ 284 (502)
T KOG0574|consen 276 TALRLCEHT 284 (502)
T ss_pred HHHHHhhhh
Confidence 999988863
|
|
| >cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-38 Score=294.12 Aligned_cols=240 Identities=18% Similarity=0.228 Sum_probs=185.3
Q ss_pred CCCcccceeeeec----------------ceecccccCCC--chhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEE
Q 014478 2 GGRCSKFSICWFH----------------CHLKSSVLESS--DLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLV 63 (424)
Q Consensus 2 G~~g~v~~~~~~~----------------~~v~~~~~~~~--~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 63 (424)
||+|.||.+.+.+ ..+++|++... ......|.+|++++++++||||+++++++..++..++|
T Consensus 16 G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~lv 95 (295)
T cd05097 16 GQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTKTARNDFLKEIKIMSRLKNPNIIRLLGVCVSDDPLCMI 95 (295)
T ss_pred CCCceEEecccccchhhccccCcccCCCceEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCcCeEEEEEcCCCccEEE
Confidence 8999999876532 12556655432 23456789999999999999999999999999999999
Q ss_pred EecCCCCCHHhHhccCC----------CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEcccc
Q 014478 64 AEFMPNETLAKHLFHWE----------TQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFG 133 (424)
Q Consensus 64 ~e~~~~gsL~~~l~~~~----------~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg 133 (424)
|||+++++|.+++.... ...+++.++++++.|++.||.|||+++ ++||||||+||+++.++.+||+|||
T Consensus 96 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~-i~H~dlkp~Nill~~~~~~kl~dfg 174 (295)
T cd05097 96 TEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLASLN-FVHRDLATRNCLVGNHYTIKIADFG 174 (295)
T ss_pred EecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHHhcC-eeccccChhhEEEcCCCcEEecccc
Confidence 99999999999985421 124688999999999999999999999 9999999999999999999999999
Q ss_pred ccccCCCCC------ccccCccCCCccccccCCCCCCcceehhHHHHHHHhhCC--CCCCchhhHHHhhhhhhHhhh---
Q 014478 134 LMKNSRDGK------SYSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGK--HIPPSHALDLIRSKNFLLLMD--- 202 (424)
Q Consensus 134 ~~~~~~~~~------~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~--~~~~~~~~~~~~~~~~~~~~~--- 202 (424)
++....... ...++..|+|||++.++.++.++|||||||++|+|+++. .||........... ......
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~~l~el~~~~~~~p~~~~~~~~~~~~-~~~~~~~~~ 253 (295)
T cd05097 175 MSRNLYSGDYYRIQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEMFTLCKEQPYSLLSDEQVIEN-TGEFFRNQG 253 (295)
T ss_pred cccccccCcceeccCcCcCceeecChhhhccCCcCchhhHHHHHHHHHHHHHcCCCCCCcccChHHHHHH-HHHhhhhcc
Confidence 987643221 123467899999999888999999999999999999844 34433211111110 111111
Q ss_pred cccCCCCCchhHHHHHHHHHHhcccCcCCCCCHHHHHHHHH
Q 014478 203 SALEGHFSNDEGTELVRLASRCLQSEARERPNAKSLVISLM 243 (424)
Q Consensus 203 ~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~~~~~l~ 243 (424)
.......+...++.+.+++.+||+.||++|||+++|++.|+
T Consensus 254 ~~~~~~~~~~~~~~l~~li~~~l~~~p~~RPs~~~i~~~l~ 294 (295)
T cd05097 254 RQIYLSQTPLCPSPVFKLMMRCWSRDIKDRPTFNKIHHFLR 294 (295)
T ss_pred ccccCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHh
Confidence 11112234456789999999999999999999999998875
|
Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including |
| >cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-38 Score=300.50 Aligned_cols=225 Identities=16% Similarity=0.254 Sum_probs=185.1
Q ss_pred CCCcccceeee--ecceecccccCCCc----hhhhHHHHHHHHHhcCC-CcCcceeEEEEEeCCeeeEEEecCCCCCHHh
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESSD----LGETLNLEEAKAVGNLR-SERLANLIGCCYEADERLLVAEFMPNETLAK 74 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~~----~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~ 74 (424)
|++|.||.+.+ .+..+++|++.... .....+..|..++..+. |++|+++++++...+..++||||++||+|.+
T Consensus 11 G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~Ey~~~g~L~~ 90 (323)
T cd05615 11 GSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQTVDRLYFVMEYVNGGDLMY 90 (323)
T ss_pred cCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEEecCCEEEEEEcCCCCCcHHH
Confidence 89999999987 46678888775432 23456778999998885 5778889999999999999999999999999
Q ss_pred HhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCC----CCccccCccC
Q 014478 75 HLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRD----GKSYSTNLAF 150 (424)
Q Consensus 75 ~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~----~~~~~gt~~y 150 (424)
++.. ...+++.++..++.|++.||.|||+++ ++||||||+|||++.++.+||+|||+++.... .....||+.|
T Consensus 91 ~i~~--~~~l~~~~~~~i~~qi~~al~~lH~~~-ivHrDikp~Nill~~~~~ikL~Dfg~~~~~~~~~~~~~~~~gt~~y 167 (323)
T cd05615 91 HIQQ--VGKFKEPQAVFYAAEISVGLFFLHRRG-IIYRDLKLDNVMLDSEGHIKIADFGMCKEHMVDGVTTRTFCGTPDY 167 (323)
T ss_pred HHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-eeccCCCHHHeEECCCCCEEEeccccccccCCCCccccCccCCccc
Confidence 9864 457999999999999999999999999 99999999999999999999999999875432 2234689999
Q ss_pred CCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHHHHHHHHHhcccCcC
Q 014478 151 TPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEAR 230 (424)
Q Consensus 151 ~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~ 230 (424)
+|||++.+..++.++|||||||++|+|++|..||........ ...+... ....+..++.++.+++.+||..||.
T Consensus 168 ~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~~~----~~~i~~~--~~~~p~~~~~~~~~li~~~l~~~p~ 241 (323)
T cd05615 168 IAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDEL----FQSIMEH--NVSYPKSLSKEAVSICKGLMTKHPS 241 (323)
T ss_pred cCHHHHcCCCCCCccchhhhHHHHHHHHhCCCCCCCCCHHHH----HHHHHhC--CCCCCccCCHHHHHHHHHHcccCHh
Confidence 999999988899999999999999999999988765422111 1111111 1234556788999999999999999
Q ss_pred CCCCH
Q 014478 231 ERPNA 235 (424)
Q Consensus 231 ~Rps~ 235 (424)
+|++.
T Consensus 242 ~R~~~ 246 (323)
T cd05615 242 KRLGC 246 (323)
T ss_pred hCCCC
Confidence 99975
|
Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a |
| >KOG0584 consensus Serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-39 Score=304.64 Aligned_cols=232 Identities=16% Similarity=0.208 Sum_probs=187.5
Q ss_pred CCCcccceeeeeccee-------cccccCCCchhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCe--eeEEEecCCCCCH
Q 014478 2 GGRCSKFSICWFHCHL-------KSSVLESSDLGETLNLEEAKAVGNLRSERLANLIGCCYEADE--RLLVAEFMPNETL 72 (424)
Q Consensus 2 G~~g~v~~~~~~~~~v-------~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~--~~lv~e~~~~gsL 72 (424)
|+|-+||++.+.-..+ +...+.++....++|..|+.+|+.|+||||++||.++.+... +.+|+|++..|+|
T Consensus 51 GafKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~H~NIirfy~SW~d~~n~~in~iTEL~TSGtL 130 (632)
T KOG0584|consen 51 GAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLKHPNIIRFYDSWVDTDNKTINFITELFTSGTL 130 (632)
T ss_pred ccceeeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCCCCceeeeeeheecCCCceeeeeeecccCCcH
Confidence 7788899887733322 333445666667899999999999999999999999987654 7799999999999
Q ss_pred HhHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCC-cccccCCCCCeeecCC-CCeEEccccccccCCCC--CccccCc
Q 014478 73 AKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGR-ALYHDLNAYRILFDKD-GNPRLSSFGLMKNSRDG--KSYSTNL 148 (424)
Q Consensus 73 ~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~-ivH~dikp~Nill~~~-~~~kl~Dfg~~~~~~~~--~~~~gt~ 148 (424)
..|+++ .+.++...+..|++||++||.|||++.| |||||||.+||+|+.+ |.|||+|+|+|...... .+..|||
T Consensus 131 r~Y~kk--~~~vn~kaik~W~RQILkGL~yLHs~~PPIIHRDLKCDNIFinG~~G~VKIGDLGLAtl~r~s~aksvIGTP 208 (632)
T KOG0584|consen 131 REYRKK--HRRVNIKAIKSWCRQILKGLVYLHSQDPPIIHRDLKCDNIFVNGNLGEVKIGDLGLATLLRKSHAKSVIGTP 208 (632)
T ss_pred HHHHHH--hccCCHHHHHHHHHHHHHHhhhhhcCCCCccccccccceEEEcCCcCceeecchhHHHHhhccccceeccCc
Confidence 999975 5678899999999999999999999864 9999999999999654 89999999999876644 4568999
Q ss_pred cCCCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhH-hhhcccCCCCCchhHHHHHHHHHHhccc
Q 014478 149 AFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLL-LMDSALEGHFSNDEGTELVRLASRCLQS 227 (424)
Q Consensus 149 ~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~li~~cl~~ 227 (424)
.|||||++. ..|+...||||||+.++||+|+..|+... .....+.+ +.....+..+..--.+++++||.+||..
T Consensus 209 EFMAPEmYE-E~YnE~VDVYaFGMCmLEMvT~eYPYsEC----~n~AQIYKKV~SGiKP~sl~kV~dPevr~fIekCl~~ 283 (632)
T KOG0584|consen 209 EFMAPEMYE-ENYNELVDVYAFGMCMLEMVTSEYPYSEC----TNPAQIYKKVTSGIKPAALSKVKDPEVREFIEKCLAT 283 (632)
T ss_pred cccChHHHh-hhcchhhhhhhhhHHHHHHHhccCChhhh----CCHHHHHHHHHcCCCHHHhhccCCHHHHHHHHHHhcC
Confidence 999999998 78999999999999999999999887654 11122222 2222222222222357899999999999
Q ss_pred CcCCCCCHHHHHHH
Q 014478 228 EARERPNAKSLVIS 241 (424)
Q Consensus 228 dp~~Rps~~~~~~~ 241 (424)
...|||+.|++.+
T Consensus 284 -~~~R~sa~eLL~d 296 (632)
T KOG0584|consen 284 -KSERLSAKELLKD 296 (632)
T ss_pred -chhccCHHHHhhC
Confidence 9999999999975
|
|
| >cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-38 Score=289.34 Aligned_cols=241 Identities=15% Similarity=0.198 Sum_probs=195.4
Q ss_pred CCCcccceeee--ecceecccccCCC----chhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHhH
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESS----DLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKH 75 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~----~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~ 75 (424)
|++|.||++.+ .+..+++|.+... ....+.+.+|++++++++|+||+++++++..++..++||||+++|+|.++
T Consensus 13 g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~ 92 (267)
T cd08224 13 GQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDHPNVIKYLASFIENNELNIVLELADAGDLSRM 92 (267)
T ss_pred CCceEEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEEEecCCCCCHHHH
Confidence 88999999988 4666777765421 22356888999999999999999999999999999999999999999998
Q ss_pred hccC--CCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCC----CccccCcc
Q 014478 76 LFHW--ETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG----KSYSTNLA 149 (424)
Q Consensus 76 l~~~--~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~----~~~~gt~~ 149 (424)
+.+. ....+++.+++.++.|++.||.|||+.+ ++||||+|+||+++.++.++|+|||+++..... ....++..
T Consensus 93 l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~-i~h~dl~p~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~ 171 (267)
T cd08224 93 IKHFKKQKRLIPERTIWKYFVQLCSALEHMHSKR-IMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSLVGTPY 171 (267)
T ss_pred HHHhcccCCCcCHHHHHHHHHHHHHHHHHHHhCC-EecCCcChhhEEECCCCcEEEeccceeeeccCCCcccceecCCcc
Confidence 8542 2456899999999999999999999999 999999999999999999999999998765432 23467889
Q ss_pred CCCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhcccCCCCCc-hhHHHHHHHHHHhcccC
Q 014478 150 FTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSN-DEGTELVRLASRCLQSE 228 (424)
Q Consensus 150 y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~li~~cl~~d 228 (424)
|+|||.+.+..++.++|+||||+++|+|++|..|+........ ..............+. ..+..+.++|.+||..+
T Consensus 172 y~apE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~i~~cl~~~ 248 (267)
T cd08224 172 YMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLY---SLCKKIEKCDYPPLPADHYSEELRDLVSRCINPD 248 (267)
T ss_pred ccCHHHhccCCCCchhcHHHHHHHHHHHHHCCCCcccCCccHH---HHHhhhhcCCCCCCChhhcCHHHHHHHHHHcCCC
Confidence 9999999888899999999999999999999988754321111 1111111111222233 56778999999999999
Q ss_pred cCCCCCHHHHHHHHHHHh
Q 014478 229 ARERPNAKSLVISLMSLQ 246 (424)
Q Consensus 229 p~~Rps~~~~~~~l~~~~ 246 (424)
|++|||+.++++.|+.+.
T Consensus 249 p~~Rp~~~~il~~~~~~~ 266 (267)
T cd08224 249 PEKRPDISYVLQVAKEMH 266 (267)
T ss_pred cccCCCHHHHHHHHHHhc
Confidence 999999999999988753
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a |
| >KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-39 Score=305.47 Aligned_cols=235 Identities=17% Similarity=0.226 Sum_probs=192.9
Q ss_pred CCCcccceeeeecc--eecccccC-CCchhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHhHhcc
Q 014478 2 GGRCSKFSICWFHC--HLKSSVLE-SSDLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFH 78 (424)
Q Consensus 2 G~~g~v~~~~~~~~--~v~~~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~ 78 (424)
|+||.||+++.... -.+.|++. ++....+.|+-||++|..+.||+||++++.|...+.+||..|||.||....++..
T Consensus 43 GAFGKVyKA~nket~~lAAaKvIetkseEELEDylVEIeILa~CdHP~ivkLl~ayy~enkLwiliEFC~GGAVDaimlE 122 (1187)
T KOG0579|consen 43 GAFGKVYKAVNKETKLLAAAKVIETKSEEELEDYLVEIEILAECDHPVIVKLLSAYYFENKLWILIEFCGGGAVDAIMLE 122 (1187)
T ss_pred ccchhhhhhhcccchhhhhhhhhcccchhHHhhhhhhhhhhhcCCChHHHHHHHHHhccCceEEEEeecCCchHhHHHHH
Confidence 89999999987433 33556664 4556688999999999999999999999999999999999999999999888765
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCC----CCCccccCccCCCcc
Q 014478 79 WETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSR----DGKSYSTNLAFTPPE 154 (424)
Q Consensus 79 ~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~----~~~~~~gt~~y~aPE 154 (424)
-+.++++.++.-+++|++.||.|||+++ |||||||..|||++-+|.++|+|||.+-... ...++.||+.|||||
T Consensus 123 -L~r~LtE~QIqvvc~q~ldALn~LHs~~-iIHRDLKAGNiL~TldGdirLADFGVSAKn~~t~qkRDsFIGTPYWMAPE 200 (1187)
T KOG0579|consen 123 -LGRVLTEDQIQVVCYQVLDALNWLHSQN-IIHRDLKAGNILLTLDGDIRLADFGVSAKNKSTRQKRDSFIGTPYWMAPE 200 (1187)
T ss_pred -hccccchHHHHHHHHHHHHHHHHHhhcc-hhhhhccccceEEEecCcEeeecccccccchhHHhhhccccCCcccccch
Confidence 4678999999999999999999999999 9999999999999999999999999865433 234688999999999
Q ss_pred ccc-----cCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhcc-cCCCCCchhHHHHHHHHHHhcccC
Q 014478 155 YMR-----TGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSA-LEGHFSNDEGTELVRLASRCLQSE 228 (424)
Q Consensus 155 ~~~-----~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~li~~cl~~d 228 (424)
++. ..+|+.++||||||++|.||..+.+|-..- ..+ ..+..+.... +....|..++..+.+|+.+||.+|
T Consensus 201 VvmCET~KD~PYDykaDiWSlGITLIEMAqiEPPHhel--npM--RVllKiaKSePPTLlqPS~Ws~~F~DfLk~cL~Kn 276 (1187)
T KOG0579|consen 201 VVMCETFKDQPYDYKADIWSLGITLIEMAQIEPPHHEL--NPM--RVLLKIAKSEPPTLLQPSHWSRSFSDFLKRCLVKN 276 (1187)
T ss_pred heeeccccCCCchhhhhHHhhhhHHHHHhccCCCcccc--chH--HHHHHHhhcCCCcccCcchhhhHHHHHHHHHHhcC
Confidence 875 457999999999999999999998543321 111 1122222221 122245678899999999999999
Q ss_pred cCCCCCHHHHHHHH
Q 014478 229 ARERPNAKSLVISL 242 (424)
Q Consensus 229 p~~Rps~~~~~~~l 242 (424)
|..||+++++++|-
T Consensus 277 p~~Rp~aaqll~Hp 290 (1187)
T KOG0579|consen 277 PRNRPPAAQLLKHP 290 (1187)
T ss_pred CccCCCHHHHhhCc
Confidence 99999999998763
|
|
| >cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-38 Score=290.70 Aligned_cols=232 Identities=18% Similarity=0.301 Sum_probs=189.9
Q ss_pred CCCcccceeee--ecceecccccCCCch----------hhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCC
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESSDL----------GETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPN 69 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~~~----------~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~ 69 (424)
|++|.||.+.. .+..+++|.+..... ..+.+.+|+.++++++||||+++++++......++||||+++
T Consensus 11 g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~ 90 (267)
T cd06628 11 GSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENIVQYLGSSLDADHLNIFLEYVPG 90 (267)
T ss_pred CCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCccEEEEEecCC
Confidence 78999999987 446677666543221 125688899999999999999999999999999999999999
Q ss_pred CCHHhHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCC--------
Q 014478 70 ETLAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG-------- 141 (424)
Q Consensus 70 gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~-------- 141 (424)
++|.+++.. ...+++..+..++.|++.||.|||+++ ++||||+|+||+++.++.++|+|||+++.....
T Consensus 91 ~~L~~~l~~--~~~l~~~~~~~~~~~l~~~l~~lH~~~-ivH~di~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~ 167 (267)
T cd06628 91 GSVAALLNN--YGAFEETLVRNFVRQILKGLNYLHNRG-IIHRDIKGANILVDNKGGIKISDFGISKKLEANSLSTKTNG 167 (267)
T ss_pred CCHHHHHHh--ccCccHHHHHHHHHHHHHHHHHHHhcC-cccccCCHHHEEEcCCCCEEecccCCCcccccccccCCccc
Confidence 999999964 457899999999999999999999999 999999999999999999999999998765421
Q ss_pred --CccccCccCCCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHHHHH
Q 014478 142 --KSYSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVR 219 (424)
Q Consensus 142 --~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 219 (424)
....++..|+|||.+.+..++.++|+|||||++|+|++|+.||..... ....... ........+..++..+.+
T Consensus 168 ~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~----~~~~~~~-~~~~~~~~~~~~~~~~~~ 242 (267)
T cd06628 168 ARPSLQGSVFWMAPEVVKQTSYTRKADIWSLGCLVVEMLTGKHPFPDCTQ----LQAIFKI-GENASPEIPSNISSEAID 242 (267)
T ss_pred cccccCCCcCccChhHhccCCCCchhhhHHHHHHHHHHhhCCCCCCCccH----HHHHHHH-hccCCCcCCcccCHHHHH
Confidence 123477899999999988899999999999999999999988765311 1111111 112233455567889999
Q ss_pred HHHHhcccCcCCCCCHHHHHHH
Q 014478 220 LASRCLQSEARERPNAKSLVIS 241 (424)
Q Consensus 220 li~~cl~~dp~~Rps~~~~~~~ 241 (424)
+|.+||+.||.+||++.+++++
T Consensus 243 li~~~l~~~p~~Rp~~~~il~~ 264 (267)
T cd06628 243 FLEKTFEIDHNKRPTAAELLKH 264 (267)
T ss_pred HHHHHccCCchhCcCHHHHhhC
Confidence 9999999999999999999853
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate |
| >cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-38 Score=294.83 Aligned_cols=239 Identities=16% Similarity=0.280 Sum_probs=189.7
Q ss_pred CCCcccceeeee--cc----eecccccCCCc--hhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHH
Q 014478 2 GGRCSKFSICWF--HC----HLKSSVLESSD--LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLA 73 (424)
Q Consensus 2 G~~g~v~~~~~~--~~----~v~~~~~~~~~--~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~ 73 (424)
|++|.||.+.+. +. .+++|.+.... .....+.+|+.+++.++||||++++++|... ..++++||+++|+|.
T Consensus 18 G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~-~~~~v~e~~~~g~l~ 96 (303)
T cd05110 18 GAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVCLSP-TIQLVTQLMPHGCLL 96 (303)
T ss_pred CCCccEEEEEEecCCCcceeeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEcCC-CceeeehhcCCCCHH
Confidence 899999999873 32 24555554332 2244688999999999999999999998764 467999999999999
Q ss_pred hHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCCC------ccccC
Q 014478 74 KHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGK------SYSTN 147 (424)
Q Consensus 74 ~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~~------~~~gt 147 (424)
+++.. ....+++..++.++.|++.||.|||+++ ++||||||+||+++.++.+||+|||+++...... ...++
T Consensus 97 ~~~~~-~~~~~~~~~~~~~~~qi~~~L~~LH~~~-ivH~dikp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~ 174 (303)
T cd05110 97 DYVHE-HKDNIGSQLLLNWCVQIAKGMMYLEERR-LVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMP 174 (303)
T ss_pred HHHHh-cccCCCHHHHHHHHHHHHHHHHHHhhcC-eeccccccceeeecCCCceEEccccccccccCcccccccCCCccc
Confidence 99864 2446899999999999999999999999 9999999999999999999999999998654321 12346
Q ss_pred ccCCCccccccCCCCCCcceehhHHHHHHHhh-CCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHHHHHHHHHhcc
Q 014478 148 LAFTPPEYMRTGRVTPESVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQ 226 (424)
Q Consensus 148 ~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~ 226 (424)
..|+|||++.+..++.++|||||||++|||++ |+.|+....... .............+..++..+.+++.+||.
T Consensus 175 ~~y~~PE~~~~~~~~~~~DiwslG~~l~el~t~g~~p~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~li~~c~~ 249 (303)
T cd05110 175 IKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTRE-----IPDLLEKGERLPQPPICTIDVYMVMVKCWM 249 (303)
T ss_pred cccCCHHHhccCCCChHHHHHHHHHHHHHHHhCCCCCCCCCCHHH-----HHHHHHCCCCCCCCCCCCHHHHHHHHHHcC
Confidence 78999999998889999999999999999997 777775432111 112222222223344567789999999999
Q ss_pred cCcCCCCCHHHHHHHHHHHhhh
Q 014478 227 SEARERPNAKSLVISLMSLQKE 248 (424)
Q Consensus 227 ~dp~~Rps~~~~~~~l~~~~~~ 248 (424)
.+|++||++++++..|..+.+.
T Consensus 250 ~~p~~Rp~~~~l~~~l~~~~~~ 271 (303)
T cd05110 250 IDADSRPKFKELAAEFSRMARD 271 (303)
T ss_pred CChhhCcCHHHHHHHHHHHHhc
Confidence 9999999999999999887654
|
Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin |
| >cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-38 Score=301.20 Aligned_cols=241 Identities=20% Similarity=0.296 Sum_probs=190.2
Q ss_pred CCCcccceeeee-------cceecccccCCCc--hhhhHHHHHHHHHhcC-CCcCcceeEEEEEeC-CeeeEEEecCCCC
Q 014478 2 GGRCSKFSICWF-------HCHLKSSVLESSD--LGETLNLEEAKAVGNL-RSERLANLIGCCYEA-DERLLVAEFMPNE 70 (424)
Q Consensus 2 G~~g~v~~~~~~-------~~~v~~~~~~~~~--~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~-~~~~lv~e~~~~g 70 (424)
|+||.||.+.+. +..+++|++.... .....+.+|+.++.++ +||||++++++|... ...+++|||+++|
T Consensus 18 G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~~lv~ey~~~g 97 (343)
T cd05103 18 GAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFG 97 (343)
T ss_pred CccceEEEEeeccCCccccceeEEEEEeccCCChHHHHHHHHHHHHHHhccCCccHhhhcceeecCCCceEEEEeccCCC
Confidence 899999999753 3557777775432 2345788999999999 789999999988654 4578999999999
Q ss_pred CHHhHhccCC-----------------------------------------------------------------CCCCC
Q 014478 71 TLAKHLFHWE-----------------------------------------------------------------TQPMK 85 (424)
Q Consensus 71 sL~~~l~~~~-----------------------------------------------------------------~~~l~ 85 (424)
+|.+++.... ...++
T Consensus 98 ~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (343)
T cd05103 98 NLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEEAEQEDLYKKVLT 177 (343)
T ss_pred cHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccccccCCCccccchhhhhhhhhhhhccCC
Confidence 9999985421 12467
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCC------CccccCccCCCccccccC
Q 014478 86 WAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG------KSYSTNLAFTPPEYMRTG 159 (424)
Q Consensus 86 ~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~------~~~~gt~~y~aPE~~~~~ 159 (424)
+.++.+++.|++.||.|||+++ ++||||||+||+++.++.+||+|||+++..... ....++..|+|||.+.+.
T Consensus 178 ~~~~~~~~~qi~~al~~lH~~~-i~H~dikp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~ 256 (343)
T cd05103 178 LEDLICYSFQVAKGMEFLASRK-CIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDR 256 (343)
T ss_pred HHHHHHHHHHHHHHHHHHHhCC-eecCCCccCeEEEcCCCcEEEEecccccccccCcchhhcCCCCCCcceECcHHhcCC
Confidence 8889999999999999999999 999999999999999999999999998764322 122345779999999888
Q ss_pred CCCCCcceehhHHHHHHHhh-CCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHHHHHHHHHhcccCcCCCCCHHHH
Q 014478 160 RVTPESVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERPNAKSL 238 (424)
Q Consensus 160 ~~~~~~Dv~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~~ 238 (424)
.++.++||||||+++|+|++ |..|++..... ...............+...++++.+++.+||..||++|||+.++
T Consensus 257 ~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~cl~~~p~~Rps~~ei 332 (343)
T cd05103 257 VYTIQSDVWSFGVLLWEIFSLGASPYPGVKID----EEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSEL 332 (343)
T ss_pred CCCchhhHHHHHHHHHHHHHCCCCCCCCcccc----HHHHHHHhccCCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHH
Confidence 89999999999999999997 77776543111 11112222222233344457789999999999999999999999
Q ss_pred HHHHHHHhh
Q 014478 239 VISLMSLQK 247 (424)
Q Consensus 239 ~~~l~~~~~ 247 (424)
+++|+.+.+
T Consensus 333 l~~l~~~~~ 341 (343)
T cd05103 333 VEHLGNLLQ 341 (343)
T ss_pred HHHHHHHHh
Confidence 999998765
|
Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp |
| >cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-38 Score=292.83 Aligned_cols=241 Identities=19% Similarity=0.261 Sum_probs=186.0
Q ss_pred CCCcccceeeeec------------------ceecccccCCC--chhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeee
Q 014478 2 GGRCSKFSICWFH------------------CHLKSSVLESS--DLGETLNLEEAKAVGNLRSERLANLIGCCYEADERL 61 (424)
Q Consensus 2 G~~g~v~~~~~~~------------------~~v~~~~~~~~--~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 61 (424)
||+|.||.+.+.+ ..+++|++... ......|.+|+.+++.++|+||+++++++..++..+
T Consensus 16 G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~ 95 (296)
T cd05095 16 GQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDANKNARNDFLKEIKIMSRLKDPNIIRLLAVCITSDPLC 95 (296)
T ss_pred CCCCeEEecccccccccccccccccCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccE
Confidence 8999999875432 23566666533 234568899999999999999999999999999999
Q ss_pred EEEecCCCCCHHhHhccCC---------CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccc
Q 014478 62 LVAEFMPNETLAKHLFHWE---------TQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSF 132 (424)
Q Consensus 62 lv~e~~~~gsL~~~l~~~~---------~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Df 132 (424)
+||||+++|+|.+++.... ...+++.++..++.|++.||.|||+++ ++||||||+||+++.++.++|+||
T Consensus 96 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~-i~H~dlkp~Nili~~~~~~~l~df 174 (296)
T cd05095 96 MITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSSLN-FVHRDLATRNCLVGKNYTIKIADF 174 (296)
T ss_pred EEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHHCC-eecccCChheEEEcCCCCEEeccC
Confidence 9999999999999986422 124678899999999999999999999 999999999999999999999999
Q ss_pred cccccCCCCC------ccccCccCCCccccccCCCCCCcceehhHHHHHHHhh--CCCCCCchhhHHHhhhh--hhHhhh
Q 014478 133 GLMKNSRDGK------SYSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLS--GKHIPPSHALDLIRSKN--FLLLMD 202 (424)
Q Consensus 133 g~~~~~~~~~------~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~--g~~~~~~~~~~~~~~~~--~~~~~~ 202 (424)
|+++...... ...++..|++||+..++.++.++|||||||++|||++ |..|+............ ......
T Consensus 175 g~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~DiwSlG~~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~ 254 (296)
T cd05095 175 GMSRNLYSGDYYRIQGRAVLPIRWMSWESILLGKFTTASDVWAFGVTLWEILTLCKEQPYSQLSDEQVIENTGEFFRDQG 254 (296)
T ss_pred cccccccCCcceeccCcCcCccccCCHHHHhcCCccchhhhhHHHHHHHHHHHhCCCCCccccChHHHHHHHHHHHhhcc
Confidence 9987653321 1233578999999888889999999999999999998 44555432111111100 000000
Q ss_pred cccCCCCCchhHHHHHHHHHHhcccCcCCCCCHHHHHHHHH
Q 014478 203 SALEGHFSNDEGTELVRLASRCLQSEARERPNAKSLVISLM 243 (424)
Q Consensus 203 ~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~~~~~l~ 243 (424)
.......+..+++.+.+++.+||+.||.+|||+.++++.|+
T Consensus 255 ~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~ 295 (296)
T cd05095 255 RQVYLPKPALCPDSLYKLMLSCWRRNAKERPSFQEIHATLL 295 (296)
T ss_pred ccccCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHHh
Confidence 11111234456789999999999999999999999998875
|
Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit |
| >KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-38 Score=299.43 Aligned_cols=232 Identities=19% Similarity=0.196 Sum_probs=197.4
Q ss_pred CCCcccceeee--ecceecccccCCCch----hhhHHHHHHHHHhcCC-CcCcceeEEEEEeCCeeeEEEecCCCCCHHh
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESSDL----GETLNLEEAKAVGNLR-SERLANLIGCCYEADERLLVAEFMPNETLAK 74 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~~~----~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~ 74 (424)
|.||.||.+.. .+..+++|++.+... ......+|+.+|+++. |||||.+++++++....++|||++.||.|.+
T Consensus 46 G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~e~~~~~~lvmEL~~GGeLfd 125 (382)
T KOG0032|consen 46 GQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAFEDPDSVYLVMELCEGGELFD 125 (382)
T ss_pred CCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEEEcCCeEEEEEEecCCchHHH
Confidence 88999999987 467788888765543 3468889999999998 9999999999999999999999999999999
Q ss_pred HhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCC----CCeEEccccccccCCCC---CccccC
Q 014478 75 HLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKD----GNPRLSSFGLMKNSRDG---KSYSTN 147 (424)
Q Consensus 75 ~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~----~~~kl~Dfg~~~~~~~~---~~~~gt 147 (424)
.+... .+++..+..++.|++.++.|||+.| ++||||||+|+|+... +.+|++|||++.....+ ...+||
T Consensus 126 ~i~~~---~~sE~da~~~~~~il~av~~lH~~g-vvHrDlKpEN~L~~~~~~~~~~ik~~DFGla~~~~~~~~~~~~~Gt 201 (382)
T KOG0032|consen 126 RIVKK---HYSERDAAGIIRQILEAVKYLHSLG-VVHRDLKPENLLLASKDEGSGRIKLIDFGLAKFIKPGERLHTIVGT 201 (382)
T ss_pred HHHHc---cCCHHHHHHHHHHHHHHHHHHHhCC-ceeccCCHHHeeeccccCCCCcEEEeeCCCceEccCCceEeeecCC
Confidence 99763 3999999999999999999999999 9999999999999433 47999999999987763 345799
Q ss_pred ccCCCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhc--ccCCCCCchhHHHHHHHHHHhc
Q 014478 148 LAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDS--ALEGHFSNDEGTELVRLASRCL 225 (424)
Q Consensus 148 ~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~li~~cl 225 (424)
+.|+|||++...+|+..+||||+|+++|.|++|..||........ ...+... ......-..++..+.++|.+|+
T Consensus 202 p~y~APEvl~~~~y~~~~DiWS~Gvi~yiLL~G~~PF~~~~~~~~----~~~i~~~~~~f~~~~w~~is~~akd~i~~ll 277 (382)
T KOG0032|consen 202 PEYVAPEVLGGRPYGDEVDVWSIGVILYILLSGVPPFWGETEFEI----FLAILRGDFDFTSEPWDDISESAKDFIRKLL 277 (382)
T ss_pred ccccCchhhcCCCCCcccchhHHHHHHHHHhhCCCCCcCCChhHH----HHHHHcCCCCCCCCCccccCHHHHHHHHHhc
Confidence 999999999999999999999999999999999998887632222 1122222 2333334457899999999999
Q ss_pred ccCcCCCCCHHHHHHH
Q 014478 226 QSEARERPNAKSLVIS 241 (424)
Q Consensus 226 ~~dp~~Rps~~~~~~~ 241 (424)
..||.+|+|+.++++|
T Consensus 278 ~~dp~~R~ta~~~L~H 293 (382)
T KOG0032|consen 278 EFDPRKRLTAAQALQH 293 (382)
T ss_pred ccCcccCCCHHHHhcC
Confidence 9999999999999985
|
|
| >cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.8e-38 Score=289.65 Aligned_cols=239 Identities=17% Similarity=0.250 Sum_probs=193.6
Q ss_pred CCCcccceeeee--cc----eecccccCCCc--hhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHH
Q 014478 2 GGRCSKFSICWF--HC----HLKSSVLESSD--LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLA 73 (424)
Q Consensus 2 G~~g~v~~~~~~--~~----~v~~~~~~~~~--~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~ 73 (424)
|+||.||++.+. +. .+++|++.... .....+.+|+.++.+++||||++++++|.. ...++||||+++|+|.
T Consensus 18 g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~v~e~~~~g~L~ 96 (279)
T cd05057 18 GAFGTVYKGVWIPEGEKVKIPVAIKVLREETSPKANKEILDEAYVMASVDHPHVVRLLGICLS-SQVQLITQLMPLGCLL 96 (279)
T ss_pred CCCccEEEEEEecCCCCcceEEEEEeccCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEec-CceEEEEecCCCCcHH
Confidence 899999999873 22 24555554332 345678899999999999999999999987 6789999999999999
Q ss_pred hHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCCCc------cccC
Q 014478 74 KHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKS------YSTN 147 (424)
Q Consensus 74 ~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~~~------~~gt 147 (424)
+++.. ....+++..++.++.|++.||.|||+.+ ++||||||+||+++.++.+||+|||+++....... ..++
T Consensus 97 ~~l~~-~~~~~~~~~~~~~~~qi~~~l~~LH~~~-i~H~di~p~nil~~~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~ 174 (279)
T cd05057 97 DYVRN-HKDNIGSQYLLNWCVQIAKGMSYLEEKR-LVHRDLAARNVLVKTPQHVKITDFGLAKLLDVDEKEYHAEGGKVP 174 (279)
T ss_pred HHHHh-ccCCCCHHHHHHHHHHHHHHHHHHHhCC-EEecccCcceEEEcCCCeEEECCCcccccccCcccceecCCCccc
Confidence 99965 3446899999999999999999999999 99999999999999999999999999886553321 1235
Q ss_pred ccCCCccccccCCCCCCcceehhHHHHHHHhh-CCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHHHHHHHHHhcc
Q 014478 148 LAFTPPEYMRTGRVTPESVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQ 226 (424)
Q Consensus 148 ~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~ 226 (424)
..|+|||.+....++.++|+||||+++||+++ |..||....... +...+........+..++..+.+++.+||.
T Consensus 175 ~~y~~PE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 249 (279)
T cd05057 175 IKWMALESILHRIYTHKSDVWSYGVTVWELMTFGAKPYEGIPAVE-----IPDLLEKGERLPQPPICTIDVYMVLVKCWM 249 (279)
T ss_pred ccccCHHHhhcCCcCchhhHHHHHHHHHHHhcCCCCCCCCCCHHH-----HHHHHhCCCCCCCCCCCCHHHHHHHHHHcC
Confidence 67999999988889999999999999999998 887776532221 122222222233445567889999999999
Q ss_pred cCcCCCCCHHHHHHHHHHHhhh
Q 014478 227 SEARERPNAKSLVISLMSLQKE 248 (424)
Q Consensus 227 ~dp~~Rps~~~~~~~l~~~~~~ 248 (424)
.||++||++.++++.|.++.+.
T Consensus 250 ~~p~~Rp~~~~l~~~l~~~~~~ 271 (279)
T cd05057 250 IDAESRPTFKELINEFSKMARD 271 (279)
T ss_pred CChhhCCCHHHHHHHHHHHHhC
Confidence 9999999999999999988664
|
Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea |
| >cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-38 Score=295.36 Aligned_cols=239 Identities=17% Similarity=0.262 Sum_probs=188.2
Q ss_pred CCCcccceeeee--cceecccccCCC--chhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHhHhc
Q 014478 2 GGRCSKFSICWF--HCHLKSSVLESS--DLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLF 77 (424)
Q Consensus 2 G~~g~v~~~~~~--~~~v~~~~~~~~--~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~ 77 (424)
|++|.||.+.+. +..++++.+... ......+.+|++++++++||||++++++|..++..++||||+++++|.+++.
T Consensus 12 G~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ey~~~~~L~~~l~ 91 (308)
T cd06615 12 GNGGVVTKVLHRPSGLIMARKLIHLEIKPAIRNQIIRELKVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLK 91 (308)
T ss_pred CCCeEEEEEEEcCCCeEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCEEEEEeeccCCCcHHHHHH
Confidence 889999999873 444555555432 2334678899999999999999999999999999999999999999999996
Q ss_pred cCCCCCCCHHHHHHHHHHHHHHHHHHHhC-CCcccccCCCCCeeecCCCCeEEccccccccCCCC--CccccCccCCCcc
Q 014478 78 HWETQPMKWAMRLRVALYLAQALEYCSSK-GRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG--KSYSTNLAFTPPE 154 (424)
Q Consensus 78 ~~~~~~l~~~~~~~i~~qi~~~L~~lH~~-~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~--~~~~gt~~y~aPE 154 (424)
. ...+++..+..++.|++.||.|||++ + ++||||||+|||++.++.+||+|||++...... ....++..|+|||
T Consensus 92 ~--~~~~~~~~~~~~~~~i~~~l~~lH~~~~-i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~aPE 168 (308)
T cd06615 92 K--AGRIPENILGKISIAVLRGLTYLREKHK-IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPE 168 (308)
T ss_pred h--cCCCCHHHHHHHHHHHHHHHHHHHhhCC-EEECCCChHHEEEecCCcEEEccCCCcccccccccccCCCCcCccChh
Confidence 5 36789999999999999999999984 7 999999999999999999999999998765432 3456789999999
Q ss_pred ccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhh----------------------------hhHhhhc---
Q 014478 155 YMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKN----------------------------FLLLMDS--- 203 (424)
Q Consensus 155 ~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~----------------------------~~~~~~~--- 203 (424)
++.+..++.++|+||||+++|+|++|..|+............ .....+.
T Consensus 169 ~~~~~~~~~~~DiwslG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (308)
T cd06615 169 RLQGTHYTVQSDIWSLGLSLVEMAIGRYPIPPPDAKELEAMFGRPVSEGEAKESHRPVSGHPPDSPRPMAIFELLDYIVN 248 (308)
T ss_pred HhcCCCCCccchHHHHHHHHHHHHhCCCCCCCcchhhHHHhhcCccccccccCCcccccCCCCCccchhhHHHHHHHHhc
Confidence 998888999999999999999999999887643211110000 0000000
Q ss_pred ccCCCCC-chhHHHHHHHHHHhcccCcCCCCCHHHHHHHHH
Q 014478 204 ALEGHFS-NDEGTELVRLASRCLQSEARERPNAKSLVISLM 243 (424)
Q Consensus 204 ~~~~~~~-~~~~~~l~~li~~cl~~dp~~Rps~~~~~~~l~ 243 (424)
......+ ..++.++.+++.+||..||++|||+.+++.+..
T Consensus 249 ~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~~ 289 (308)
T cd06615 249 EPPPKLPSGAFSDEFQDFVDKCLKKNPKERADLKELTKHPF 289 (308)
T ss_pred CCCccCcCcccCHHHHHHHHHHccCChhhCcCHHHHhcChh
Confidence 0000111 125678999999999999999999999997743
|
Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down |
| >cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-38 Score=292.33 Aligned_cols=232 Identities=15% Similarity=0.242 Sum_probs=191.0
Q ss_pred CCCcccceeee--ecceecccccCCC--chhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHhHhc
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESS--DLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLF 77 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~--~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~ 77 (424)
|++|.||.+.+ .+..+++|.+... ....+.+.+|++++++++||||+++++++..+...++||||+++++|.+++.
T Consensus 15 g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~ 94 (277)
T cd06642 15 GSFGEVYKGIDNRTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYYGSYLKGTKLWIIMEYLGGGSALDLLK 94 (277)
T ss_pred CCCeeEEEEEEcCCCeEEEEEEeccccchHHHHHHHHHHHHHHcCCCCccHhhhcccccCCceEEEEEccCCCcHHHHhh
Confidence 88999999987 3456677766533 2345678899999999999999999999999999999999999999999984
Q ss_pred cCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCCC----ccccCccCCCc
Q 014478 78 HWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGK----SYSTNLAFTPP 153 (424)
Q Consensus 78 ~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~~----~~~gt~~y~aP 153 (424)
...+++..+..++.|++.||.|||+++ ++|+||+|+||+++.++.++|+|||++....... ...++..|+||
T Consensus 95 ---~~~~~~~~~~~~~~~i~~~l~~lH~~~-ivH~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aP 170 (277)
T cd06642 95 ---PGPLEETYIATILREILKGLDYLHSER-KIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTFVGTPFWMAP 170 (277)
T ss_pred ---cCCCCHHHHHHHHHHHHHHHHHHhcCC-eeccCCChheEEEeCCCCEEEccccccccccCcchhhhcccCcccccCH
Confidence 457899999999999999999999999 9999999999999999999999999987654332 23578899999
Q ss_pred cccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHHHHHHHHHhcccCcCCCC
Q 014478 154 EYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERP 233 (424)
Q Consensus 154 E~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rp 233 (424)
|++.+..++.++|||||||++|||++|..|+..... ...............+..++.++.+++.+||..+|++||
T Consensus 171 E~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp 245 (277)
T cd06642 171 EVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLHP-----MRVLFLIPKNSPPTLEGQYSKPFKEFVEACLNKDPRFRP 245 (277)
T ss_pred HHhCcCCCchhhhHHHHHHHHHHHHhCCCCCcccch-----hhHHhhhhcCCCCCCCcccCHHHHHHHHHHccCCcccCc
Confidence 999988899999999999999999999977653211 111111222222233445678899999999999999999
Q ss_pred CHHHHHHHH
Q 014478 234 NAKSLVISL 242 (424)
Q Consensus 234 s~~~~~~~l 242 (424)
|+.+++.+-
T Consensus 246 ~~~~il~~~ 254 (277)
T cd06642 246 TAKELLKHK 254 (277)
T ss_pred CHHHHHHhH
Confidence 999999863
|
Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25 |
| >PTZ00036 glycogen synthase kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.7e-39 Score=312.82 Aligned_cols=235 Identities=20% Similarity=0.232 Sum_probs=180.3
Q ss_pred CCCcccceeee--ecceecccccCCCchhhhHHHHHHHHHhcCCCcCcceeEEEEEeC--------CeeeEEEecCCCCC
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESSDLGETLNLEEAKAVGNLRSERLANLIGCCYEA--------DERLLVAEFMPNET 71 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~--------~~~~lv~e~~~~gs 71 (424)
|+||.||.+.+ .+..+++|++.... ....+|+.+|+.++||||+++++++... ...++||||+++ +
T Consensus 77 G~fg~Vy~~~~~~~~~~vAiK~i~~~~---~~~~~Ei~il~~l~h~niv~l~~~~~~~~~~~~~~~~~l~lvmE~~~~-~ 152 (440)
T PTZ00036 77 GSFGVVYEAICIDTSEKVAIKKVLQDP---QYKNRELLIMKNLNHINIIFLKDYYYTECFKKNEKNIFLNVVMEFIPQ-T 152 (440)
T ss_pred CCCEEEEEEEECCCCCEEEEEEEecCc---chHHHHHHHHHhcCCCCCcceeeeEeecccccCCCceEEEEEEecCCc-c
Confidence 89999999987 55678888765432 3345799999999999999999887532 236699999975 7
Q ss_pred HHhHhcc--CCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCC-CeEEccccccccCCCC---Cccc
Q 014478 72 LAKHLFH--WETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDG-NPRLSSFGLMKNSRDG---KSYS 145 (424)
Q Consensus 72 L~~~l~~--~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~-~~kl~Dfg~~~~~~~~---~~~~ 145 (424)
|.+++.. .....+++..+..++.||+.||.|||+++ |+||||||+|||++.++ .+||+|||+++..... ....
T Consensus 153 l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH~~~-IiHrDLKp~NILl~~~~~~vkL~DFGla~~~~~~~~~~~~~ 231 (440)
T PTZ00036 153 VHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIHSKF-ICHRDLKPQNLLIDPNTHTLKLCDFGSAKNLLAGQRSVSYI 231 (440)
T ss_pred HHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCC-EecCCcCHHHEEEcCCCCceeeeccccchhccCCCCcccCC
Confidence 8776642 13567999999999999999999999999 99999999999998665 6999999999865432 2456
Q ss_pred cCccCCCccccccC-CCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHh----------hh------------
Q 014478 146 TNLAFTPPEYMRTG-RVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLL----------MD------------ 202 (424)
Q Consensus 146 gt~~y~aPE~~~~~-~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~----------~~------------ 202 (424)
||+.|+|||++.+. .++.++|||||||++|||++|..||................ ..
T Consensus 232 ~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~ 311 (440)
T PTZ00036 232 CSRFYRAPELMLGATNYTTHIDLWSLGCIIAEMILGYPIFSGQSSVDQLVRIIQVLGTPTEDQLKEMNPNYADIKFPDVK 311 (440)
T ss_pred CCcCccCHHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhchhhhcccCCccC
Confidence 79999999998764 58999999999999999999998887642111100000000 00
Q ss_pred -cccCCCCCchhHHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 014478 203 -SALEGHFSNDEGTELVRLASRCLQSEARERPNAKSLVIS 241 (424)
Q Consensus 203 -~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~~~~~ 241 (424)
......+|...++++.+||.+||..||.+|||+.+++.+
T Consensus 312 ~~~l~~~~p~~~~~~~~~li~~~L~~dP~~R~ta~e~l~h 351 (440)
T PTZ00036 312 PKDLKKVFPKGTPDDAINFISQFLKYEPLKRLNPIEALAD 351 (440)
T ss_pred chhHHHHhccCCCHHHHHHHHHHCCCChhHCcCHHHHhCC
Confidence 000111233456789999999999999999999999976
|
|
| >cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-38 Score=291.80 Aligned_cols=233 Identities=18% Similarity=0.250 Sum_probs=186.4
Q ss_pred CCCcccceeee--ecceecccccCCC--chhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHhHhc
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESS--DLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLF 77 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~--~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~ 77 (424)
|++|.||.+.+ .+..+++|++... ......+.+|++++.+++||||+++++++...+..++||||+++++|..+.
T Consensus 12 g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~l~~~~- 90 (279)
T cd06619 12 GNGGTVYKAYHLLTRRILAVKVIPLDITVELQKQIMSELEILYKCDSPYIIGFYGAFFVENRISICTEFMDGGSLDVYR- 90 (279)
T ss_pred CCCeEEEEEEEcCCCcEEEEEEEecCCChHHHHHHHHHHHHHHhCCCCCeeeEEEEEEECCEEEEEEecCCCCChHHhh-
Confidence 78999999987 4566777766433 233567889999999999999999999999999999999999999997543
Q ss_pred cCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCC--CccccCccCCCccc
Q 014478 78 HWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG--KSYSTNLAFTPPEY 155 (424)
Q Consensus 78 ~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~--~~~~gt~~y~aPE~ 155 (424)
.+++..+..++.|++.||.|||+.+ ++|+||||+||+++.++.++|+|||++...... ....+|..|+|||+
T Consensus 91 -----~~~~~~~~~~~~qi~~~l~~lH~~~-i~H~dlkp~Nill~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~y~aPE~ 164 (279)
T cd06619 91 -----KIPEHVLGRIAVAVVKGLTYLWSLK-ILHRDVKPSNMLVNTRGQVKLCDFGVSTQLVNSIAKTYVGTNAYMAPER 164 (279)
T ss_pred -----cCCHHHHHHHHHHHHHHHHHHHHCC-EeeCCCCHHHEEECCCCCEEEeeCCcceecccccccCCCCChhhcCcee
Confidence 4788899999999999999999999 999999999999999999999999998765433 34568899999999
Q ss_pred cccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHH---HhhhhhhHhhhcccCCCCCchhHHHHHHHHHHhcccCcCCC
Q 014478 156 MRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDL---IRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARER 232 (424)
Q Consensus 156 ~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~R 232 (424)
+.+..++.++|+||||+++|+|++|+.||....... ......................++++.+++.+||..||++|
T Consensus 165 ~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R 244 (279)
T cd06619 165 ISGEQYGIHSDVWSLGISFMELALGRFPYPQIQKNQGSLMPLQLLQCIVDEDPPVLPVGQFSEKFVHFITQCMRKQPKER 244 (279)
T ss_pred ecCCCCCCcchHHHHHHHHHHHHhCCCCchhhcccccccchHHHHHHHhccCCCCCCCCcCCHHHHHHHHHHhhCChhhC
Confidence 998889999999999999999999998875421100 00011111111111111123356789999999999999999
Q ss_pred CCHHHHHHH
Q 014478 233 PNAKSLVIS 241 (424)
Q Consensus 233 ps~~~~~~~ 241 (424)
|++++++.+
T Consensus 245 p~~~eil~~ 253 (279)
T cd06619 245 PAPENLMDH 253 (279)
T ss_pred CCHHHHhcC
Confidence 999999876
|
Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p |
| >KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-39 Score=305.57 Aligned_cols=234 Identities=19% Similarity=0.266 Sum_probs=202.4
Q ss_pred CCCcccceeeeec-----ceecccccCCCch--hhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHh
Q 014478 2 GGRCSKFSICWFH-----CHLKSSVLESSDL--GETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAK 74 (424)
Q Consensus 2 G~~g~v~~~~~~~-----~~v~~~~~~~~~~--~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~ 74 (424)
|+||.|.++.|.. -.|++|.+..... ..+.|++|+.+|.+|+|||++++||+..+ ....||||++++|||.+
T Consensus 121 GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~~mddflrEas~M~~L~H~hliRLyGvVl~-qp~mMV~ELaplGSLld 199 (1039)
T KOG0199|consen 121 GSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNAIMDDFLREASHMLKLQHPHLIRLYGVVLD-QPAMMVFELAPLGSLLD 199 (1039)
T ss_pred cceeeEeeccccCCCCcEEeEEEEeccCCccchhHHHHHHHHHHHHhccCcceeEEeeeecc-chhhHHhhhcccchHHH
Confidence 8999999999943 3467787766554 36899999999999999999999999987 66889999999999999
Q ss_pred HhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCCCcc-------ccC
Q 014478 75 HLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSY-------STN 147 (424)
Q Consensus 75 ~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~~~~-------~gt 147 (424)
.|.+.....|.......++.||+.||.||..++ +|||||...|+|+-....|||+|||+.+-....... .-.
T Consensus 200 rLrka~~~~llv~~Lcdya~QiA~aM~YLeskr-lvHRDLAARNlllasprtVKI~DFGLmRaLg~ned~Yvm~p~rkvP 278 (1039)
T KOG0199|consen 200 RLRKAKKAILLVSRLCDYAMQIAKAMQYLESKR-LVHRDLAARNLLLASPRTVKICDFGLMRALGENEDMYVMAPQRKVP 278 (1039)
T ss_pred HHhhccccceeHHHHHHHHHHHHHHHHHHhhhh-hhhhhhhhhhheecccceeeeecccceeccCCCCcceEecCCCcCc
Confidence 998755667888999999999999999999999 999999999999988889999999999987654322 235
Q ss_pred ccCCCccccccCCCCCCcceehhHHHHHHHhhCC-CCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHHHHHHHHHhcc
Q 014478 148 LAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGK-HIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQ 226 (424)
Q Consensus 148 ~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~ 226 (424)
..|+|||.+..++++.+||||+|||++|||+|+. .||.+. ....+.+.++..-+...|..|++++.+++..||.
T Consensus 279 fAWCaPEsLrh~kFShaSDvWmyGVTiWEMFtyGEePW~G~-----~g~qIL~~iD~~erLpRPk~csedIY~imk~cWa 353 (1039)
T KOG0199|consen 279 FAWCAPESLRHRKFSHASDVWMYGVTIWEMFTYGEEPWVGC-----RGIQILKNIDAGERLPRPKYCSEDIYQIMKNCWA 353 (1039)
T ss_pred ccccCHhHhccccccccchhhhhhhhHHhhhccCCCCCCCC-----CHHHHHHhccccccCCCCCCChHHHHHHHHHhcc
Confidence 7899999999999999999999999999999854 576663 4455566666666677888999999999999999
Q ss_pred cCcCCCCCHHHHHHHH
Q 014478 227 SEARERPNAKSLVISL 242 (424)
Q Consensus 227 ~dp~~Rps~~~~~~~l 242 (424)
.+|++|||+..|.+.+
T Consensus 354 h~paDRptFsair~~~ 369 (1039)
T KOG0199|consen 354 HNPADRPTFSAIREDL 369 (1039)
T ss_pred CCccccccHHHHHHhH
Confidence 9999999999998543
|
|
| >cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.9e-38 Score=289.80 Aligned_cols=232 Identities=15% Similarity=0.234 Sum_probs=193.1
Q ss_pred CCCcccceeee--ecceecccccCCC--chhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHhHhc
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESS--DLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLF 77 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~--~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~ 77 (424)
|++|.||.+.+ .+..+++|++... ......+.+|+.+++.+.||||+++++++..+...++||||++||+|.+++.
T Consensus 15 g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~i~ 94 (277)
T cd06640 15 GSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKGTKLWIIMEYLGGGSALDLLR 94 (277)
T ss_pred CCCeEEEEEEEccCCEEEEEEEEeccccHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEEecCCCCcHHHHHh
Confidence 78999999987 4566777766533 2345678899999999999999999999999999999999999999999985
Q ss_pred cCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCC----CccccCccCCCc
Q 014478 78 HWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG----KSYSTNLAFTPP 153 (424)
Q Consensus 78 ~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~----~~~~gt~~y~aP 153 (424)
..++++.++..++.|++.||.|||+++ ++|+||+|+||+++.++.++|+|||++...... ....++..|+||
T Consensus 95 ---~~~l~~~~~~~~~~~l~~~l~~lh~~~-ivH~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~ap 170 (277)
T cd06640 95 ---AGPFDEFQIATMLKEILKGLDYLHSEK-KIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTFVGTPFWMAP 170 (277)
T ss_pred ---cCCCCHHHHHHHHHHHHHHHHHHHhCC-ccCcCCChhhEEEcCCCCEEEcccccceeccCCccccccccCcccccCH
Confidence 356899999999999999999999999 999999999999999999999999998765432 233578889999
Q ss_pred cccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHHHHHHHHHhcccCcCCCC
Q 014478 154 EYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERP 233 (424)
Q Consensus 154 E~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rp 233 (424)
|.+.+..++.++|+|||||++|||++|..|+..... ...............+..++..+.+++.+||..+|++||
T Consensus 171 E~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp 245 (277)
T cd06640 171 EVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHP-----MRVLFLIPKNNPPTLTGEFSKPFKEFIDACLNKDPSFRP 245 (277)
T ss_pred hHhccCCCccHHHHHHHHHHHHHHHHCCCCCCCcCh-----HhHhhhhhcCCCCCCchhhhHHHHHHHHHHcccCcccCc
Confidence 999888899999999999999999999977754311 111112222223344556788999999999999999999
Q ss_pred CHHHHHHHH
Q 014478 234 NAKSLVISL 242 (424)
Q Consensus 234 s~~~~~~~l 242 (424)
++.+++.+-
T Consensus 246 ~~~~il~~~ 254 (277)
T cd06640 246 TAKELLKHK 254 (277)
T ss_pred CHHHHHhCh
Confidence 999998764
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter |
| >cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-38 Score=293.04 Aligned_cols=235 Identities=13% Similarity=0.176 Sum_probs=188.7
Q ss_pred CCCcccceeee--ecceecccccCCCchhhhHHHHHHHHHhcC-CCcCcceeEEEEEe------CCeeeEEEecCCCCCH
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESSDLGETLNLEEAKAVGNL-RSERLANLIGCCYE------ADERLLVAEFMPNETL 72 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~------~~~~~lv~e~~~~gsL 72 (424)
|++|.||.+.+ .+..+++|+..........+..|+.++.++ +||||+++++++.. ....+++|||+++|+|
T Consensus 27 g~~~~v~~~~~~~~~~~~a~K~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~L 106 (282)
T cd06636 27 GTYGQVYKGRHVKTGQLAAIKVMDVTEDEEEEIKLEINMLKKYSHHRNIATYYGAFIKKSPPGHDDQLWLVMEFCGAGSV 106 (282)
T ss_pred CCCeEEEEEEEcCCCcEEEEEEEecChHHHHHHHHHHHHHHHhcCCCcEEEEeeehhcccccCCCCEEEEEEEeCCCCcH
Confidence 88999999987 456677777766655566788999999999 79999999999853 4567999999999999
Q ss_pred HhHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCC----CCccccCc
Q 014478 73 AKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRD----GKSYSTNL 148 (424)
Q Consensus 73 ~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~----~~~~~gt~ 148 (424)
.+++.......+++.++..++.|++.||.|||+.+ ++||||||+||+++.++.++|+|||++..... .....++.
T Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~-ivH~dl~~~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~ 185 (282)
T cd06636 107 TDLVKNTKGNALKEDWIAYICREILRGLAHLHAHK-VIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRRNTFIGTP 185 (282)
T ss_pred HHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCCHHHEEECCCCCEEEeeCcchhhhhccccCCCcccccc
Confidence 99997644567889999999999999999999999 99999999999999999999999999875432 23356789
Q ss_pred cCCCccccc-----cCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHHHHHHHHH
Q 014478 149 AFTPPEYMR-----TGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASR 223 (424)
Q Consensus 149 ~y~aPE~~~-----~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 223 (424)
.|+|||.+. ...++.++|||||||++|+|++|..||.... ....................++.++.++|.+
T Consensus 186 ~y~aPE~l~~~~~~~~~~~~~~DvwslG~~l~el~~g~~p~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ 261 (282)
T cd06636 186 YWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGAPPLCDMH----PMRALFLIPRNPPPKLKSKKWSKKFIDFIEG 261 (282)
T ss_pred cccCHhhcCcccCcCcCCCcccchhHHHHHHHHHHhCCCCccccC----HHhhhhhHhhCCCCCCcccccCHHHHHHHHH
Confidence 999999886 3457889999999999999999998775431 1111111111122222233567899999999
Q ss_pred hcccCcCCCCCHHHHHHH
Q 014478 224 CLQSEARERPNAKSLVIS 241 (424)
Q Consensus 224 cl~~dp~~Rps~~~~~~~ 241 (424)
||..||.+|||+.+++.+
T Consensus 262 cl~~~p~~Rp~~~ell~~ 279 (282)
T cd06636 262 CLVKNYLSRPSTEQLLKH 279 (282)
T ss_pred HhCCChhhCcCHHHHhcC
Confidence 999999999999999754
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea |
| >cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-38 Score=302.21 Aligned_cols=235 Identities=13% Similarity=0.146 Sum_probs=183.1
Q ss_pred CCCcccceeee--ecceecccccCCC---chhhhHHHHHHHHHhcCCCcCcceeEEEEEeCC------eeeEEEecCCCC
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESS---DLGETLNLEEAKAVGNLRSERLANLIGCCYEAD------ERLLVAEFMPNE 70 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~---~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~------~~~lv~e~~~~g 70 (424)
|+||.||.+.. .+..+++|++... ......+.+|+.+++.++||||+++++++.... ..++||||+++
T Consensus 32 G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~~lv~e~~~~- 110 (359)
T cd07876 32 GAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKSLEEFQDVYLVMELMDA- 110 (359)
T ss_pred CCCEEEEEEEEcCCCceeEEEEecccccchhHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCCccccceeEEEEeCCCc-
Confidence 89999999987 5677888877543 234567889999999999999999999986543 46899999976
Q ss_pred CHHhHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCC---CccccC
Q 014478 71 TLAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG---KSYSTN 147 (424)
Q Consensus 71 sL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~---~~~~gt 147 (424)
+|...+. ..+++..+..++.|++.||.|||+++ |+||||||+|||++.++.+||+|||+++..... ....+|
T Consensus 111 ~l~~~~~----~~~~~~~~~~~~~qi~~~L~~LH~~~-ivHrDlkp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~t 185 (359)
T cd07876 111 NLCQVIH----MELDHERMSYLLYQMLCGIKHLHSAG-IIHRDLKPSNIVVKSDCTLKILDFGLARTACTNFMMTPYVVT 185 (359)
T ss_pred CHHHHHh----ccCCHHHHHHHHHHHHHHHHHHHhCC-cccCCCCHHHEEECCCCCEEEecCCCccccccCccCCCCccc
Confidence 6777663 35889999999999999999999999 999999999999999999999999998764432 334678
Q ss_pred ccCCCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHH-Hhh-----------------hhhhHhhhcc--cC-
Q 014478 148 LAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDL-IRS-----------------KNFLLLMDSA--LE- 206 (424)
Q Consensus 148 ~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~-~~~-----------------~~~~~~~~~~--~~- 206 (424)
..|+|||++.+..++.++|||||||++|+|++|+.||....... +.. .......... ..
T Consensus 186 ~~y~aPE~~~~~~~~~~~DiwSlG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (359)
T cd07876 186 RYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQLGTPSAEFMNRLQPTVRNYVENRPQYPG 265 (359)
T ss_pred CCCCCchhccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHhhCCCCCC
Confidence 99999999998889999999999999999999998886431100 000 0000000000 00
Q ss_pred ---------------CCCCchhHHHHHHHHHHhcccCcCCCCCHHHHHHHH
Q 014478 207 ---------------GHFSNDEGTELVRLASRCLQSEARERPNAKSLVISL 242 (424)
Q Consensus 207 ---------------~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~~~~~l 242 (424)
.......++++.+||.+||..||++|||+.+++.+-
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp 316 (359)
T cd07876 266 ISFEELFPDWIFPSESERDKLKTSQARDLLSKMLVIDPDKRISVDEALRHP 316 (359)
T ss_pred cchhhhccccccccccccccccchhHHHHHHHHhccCcccCCCHHHHhcCc
Confidence 001112356789999999999999999999999764
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn |
| >smart00219 TyrKc Tyrosine kinase, catalytic domain | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-38 Score=286.80 Aligned_cols=235 Identities=23% Similarity=0.344 Sum_probs=192.3
Q ss_pred CCCcccceeeeec------ceecccccCCCch--hhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHH
Q 014478 2 GGRCSKFSICWFH------CHLKSSVLESSDL--GETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLA 73 (424)
Q Consensus 2 G~~g~v~~~~~~~------~~v~~~~~~~~~~--~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~ 73 (424)
|++|.||.+.+.. ..+++|++..... ..+.+..|++++..++|+||+++++++...+..+++|||+++++|.
T Consensus 10 g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~i~e~~~~~~l~ 89 (258)
T smart00219 10 GAFGEVYKGTLKGLSGEKEVEVAVKTLKEDADEQQIEEFLREARIMRKLDHPNIVKLLGVCTEEEPLMIVMEYMEGGDLL 89 (258)
T ss_pred CCCcceEEEEecCCCCCCCceEEEEEccCCCChHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCeeEEEEeccCCCCHH
Confidence 8999999999865 5577777765443 4678899999999999999999999999999999999999999999
Q ss_pred hHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCCC-----ccccCc
Q 014478 74 KHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGK-----SYSTNL 148 (424)
Q Consensus 74 ~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~~-----~~~gt~ 148 (424)
+++.......+++.++..++.|++.||.+||+++ ++||||||+||+++.++.++|+|||+++...... ...++.
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lh~~~-~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~ 168 (258)
T smart00219 90 DYLRKNRPKELSLSDLLSFALQIARGMEYLESKN-FIHRDLAARNCLVGENLVVKISDFGLSRDLYDDDYYKKKGGKLPI 168 (258)
T ss_pred HHHHhhhhccCCHHHHHHHHHHHHHHHHHHhcCC-eeecccccceEEEccCCeEEEcccCCceecccccccccccCCCcc
Confidence 9996532223899999999999999999999999 9999999999999999999999999987665431 123668
Q ss_pred cCCCccccccCCCCCCcceehhHHHHHHHhh-CCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHHHHHHHHHhccc
Q 014478 149 AFTPPEYMRTGRVTPESVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQS 227 (424)
Q Consensus 149 ~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~ 227 (424)
.|+|||.+.+..++.++||||||+++++|++ |..|+..... ...............+...+.++.+++.+||..
T Consensus 169 ~y~~Pe~~~~~~~~~~~Di~slG~i~~~l~~~g~~p~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~ 243 (258)
T smart00219 169 RWMAPESLKDGKFTSKSDVWSFGVLLWEIFTLGESPYPGMSN-----EEVLEYLKKGYRLPKPENCPPEIYKLMLQCWAE 243 (258)
T ss_pred cccChHHhccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCH-----HHHHHHHhcCCCCCCCCcCCHHHHHHHHHHCcC
Confidence 8999999987889999999999999999998 6655543211 111112222223334455788999999999999
Q ss_pred CcCCCCCHHHHHHHH
Q 014478 228 EARERPNAKSLVISL 242 (424)
Q Consensus 228 dp~~Rps~~~~~~~l 242 (424)
||++|||+.++++.|
T Consensus 244 ~p~~Rpt~~~ll~~l 258 (258)
T smart00219 244 DPEDRPTFSELVEIL 258 (258)
T ss_pred ChhhCcCHHHHHhhC
Confidence 999999999998653
|
Phosphotransferases. Tyrosine-specific kinase subfamily. |
| >cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-38 Score=298.96 Aligned_cols=238 Identities=16% Similarity=0.139 Sum_probs=183.8
Q ss_pred CCcccceeee--ecceecccccCCCc---hhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHhHhc
Q 014478 3 GRCSKFSICW--FHCHLKSSVLESSD---LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLF 77 (424)
Q Consensus 3 ~~g~v~~~~~--~~~~v~~~~~~~~~---~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~ 77 (424)
++|.||.+.+ .+..+++|.+.... .....+.+|+++++.++||||++++++|..++..++||||+++|+|.+++.
T Consensus 12 ~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~~~~l~~~~~ 91 (327)
T cd08227 12 DLMTVNLARYKPTGEYVTVRRINLEACTNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFMAYGSAKDLIC 91 (327)
T ss_pred ceEEEEEEeecccCcEEEEEEechhhccHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEECCEEEEEEeccCCCcHHHHHH
Confidence 6778888877 56778888775432 234567789999999999999999999999999999999999999999996
Q ss_pred cCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCC-----------CCcccc
Q 014478 78 HWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRD-----------GKSYST 146 (424)
Q Consensus 78 ~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~-----------~~~~~g 146 (424)
......+++..+..++.|++.||.|||+++ ++||||||+|||++.++.++++||+.+..... .....+
T Consensus 92 ~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~-iiH~dlkp~Nil~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (327)
T cd08227 92 THFMDGMSELAIAYILQGVLKALDYIHHMG-YVHRSVKASHILISVDGKVYLSGLRSNLSMINHGQRLRVVHDFPKYSVK 170 (327)
T ss_pred hhccCCCCHHHHHHHHHHHHHHHHHHHHCC-EecCCCChhhEEEecCCcEEEcccchhhccccccccccccccccccccc
Confidence 544456899999999999999999999999 99999999999999999999999986443221 112245
Q ss_pred CccCCCcccccc--CCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhH----hhhc-----------------
Q 014478 147 NLAFTPPEYMRT--GRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLL----LMDS----------------- 203 (424)
Q Consensus 147 t~~y~aPE~~~~--~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~----~~~~----------------- 203 (424)
+..|+|||++.+ ..++.++|||||||++|||++|+.||............... ..+.
T Consensus 171 ~~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (327)
T cd08227 171 VLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLLDTTTIPAEELTMKPSRSGA 250 (327)
T ss_pred eecccChHHhhcccCCCCchhhHHHHHHHHHHHHHCCCCCCCcchhHHHHHHhcCCccccccccchhhhhcccCCcccCC
Confidence 678999999976 35889999999999999999999887643211110000000 0000
Q ss_pred -------------------ccCCCCCchhHHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 014478 204 -------------------ALEGHFSNDEGTELVRLASRCLQSEARERPNAKSLVIS 241 (424)
Q Consensus 204 -------------------~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~~~~~ 241 (424)
.........+++++.+++.+||+.||++|||+++++++
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~ell~~ 307 (327)
T cd08227 251 NSGLGESTTVSTPRPSNGESSSHPYNRTFSPHFHHFVEQCLQRNPDARPSASTLLNH 307 (327)
T ss_pred cCCCCcccccCCcCccccCCcccccccccCHHHHHHHHHHHhhCchhcCCHHHHhcC
Confidence 00001112346789999999999999999999999975
|
Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype |
| >PHA03211 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-38 Score=309.88 Aligned_cols=232 Identities=17% Similarity=0.172 Sum_probs=179.3
Q ss_pred CCCcccceeeee--cceecccccCCCchhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHhHhccC
Q 014478 2 GGRCSKFSICWF--HCHLKSSVLESSDLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHW 79 (424)
Q Consensus 2 G~~g~v~~~~~~--~~~v~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~ 79 (424)
|++|.||.+.+. +..|++|.. ....+.+|+++|++|+|+||+++++++..++..++|||++. ++|.+++..
T Consensus 180 G~~G~Vy~a~~~~~~~~vavK~~-----~~~~~~~E~~iL~~L~HpnIv~l~~~~~~~~~~~lv~e~~~-~~L~~~l~~- 252 (461)
T PHA03211 180 GSEGCVFESSHPDYPQRVVVKAG-----WYASSVHEARLLRRLSHPAVLALLDVRVVGGLTCLVLPKYR-SDLYTYLGA- 252 (461)
T ss_pred CCCeEEEEEEECCCCCEEEEecc-----cccCHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEEccC-CCHHHHHHh-
Confidence 899999999884 455666542 12346789999999999999999999999999999999995 689888854
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCC------CccccCccCCCc
Q 014478 80 ETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG------KSYSTNLAFTPP 153 (424)
Q Consensus 80 ~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~------~~~~gt~~y~aP 153 (424)
....+++.+++.|+.||+.||.|||+++ ||||||||+|||++.++.+||+|||+++..... ....||..|+||
T Consensus 253 ~~~~l~~~~~~~i~~qi~~aL~yLH~~g-IvHrDLKP~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~~~GT~~Y~AP 331 (461)
T PHA03211 253 RLRPLGLAQVTAVARQLLSAIDYIHGEG-IIHRDIKTENVLVNGPEDICLGDFGAACFARGSWSTPFHYGIAGTVDTNAP 331 (461)
T ss_pred cCCCCCHHHHHHHHHHHHHHHHHHHHCC-EEECcCCHHHEEECCCCCEEEcccCCceecccccccccccccCCCcCCcCH
Confidence 2457999999999999999999999999 999999999999999999999999998765322 124589999999
Q ss_pred cccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHh---hhhhhHhhhc------c--------------------
Q 014478 154 EYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIR---SKNFLLLMDS------A-------------------- 204 (424)
Q Consensus 154 E~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~---~~~~~~~~~~------~-------------------- 204 (424)
|++.+..++.++|||||||++|||++|..++......... ...+...+.. .
T Consensus 332 E~~~~~~~~~~sDvwSlGviL~El~~g~~~lf~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 411 (461)
T PHA03211 332 EVLAGDPYTPSVDIWSAGLVIFEAAVHTASLFSASRGDERRPYDAQILRIIRQAQVHVDEFPQHAGSRLVSQYRHRAARN 411 (461)
T ss_pred HHHcCCCCCchHHHHHHHHHHHHHHHcCCCcccCCcccccCCcHHHHHHHHHhhccccccCCCCcchHHHHHHHhhhhcc
Confidence 9999888999999999999999999987543321100000 0000000000 0
Q ss_pred cCCC-----CC--chhHHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 014478 205 LEGH-----FS--NDEGTELVRLASRCLQSEARERPNAKSLVIS 241 (424)
Q Consensus 205 ~~~~-----~~--~~~~~~l~~li~~cl~~dp~~Rps~~~~~~~ 241 (424)
.... +. ...+.++.+||.+||+.||.+|||+.|++++
T Consensus 412 ~~~~~~~~~~~~~~~~~~~~~dli~~mL~~DP~~RPsa~elL~h 455 (461)
T PHA03211 412 RRPAYTRPAWTRYYKLDLDVEYLVCRALTFDGARRPSAAELLRL 455 (461)
T ss_pred cCCccCCcchhhhccccchHHHHHHHHcccChhhCcCHHHHhhC
Confidence 0000 00 0234578999999999999999999999976
|
|
| >cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-38 Score=293.67 Aligned_cols=232 Identities=18% Similarity=0.283 Sum_probs=191.0
Q ss_pred CCCcccceeee--ecceecccccCCCc-hhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHhHhcc
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESSD-LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFH 78 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~ 78 (424)
|++|.||.+.+ .+..+++|.+.... ...+.+.+|+.+++.++||||+++++++..+...++||||+++++|..++.
T Consensus 30 g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~- 108 (296)
T cd06655 30 GASGTVFTAIDVATGQEVAIKQINLQKQPKKELIINEILVMKELKNPNIVNFLDSFLVGDELFVVMEYLAGGSLTDVVT- 108 (296)
T ss_pred CCCeEEEEEEEcCCCcEEEEEEEecccCchHHHHHHHHHHHHhcCCCceeeeeeeEecCceEEEEEEecCCCcHHHHHH-
Confidence 78899999886 56677777665433 335678899999999999999999999999999999999999999999985
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCC----CccccCccCCCcc
Q 014478 79 WETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG----KSYSTNLAFTPPE 154 (424)
Q Consensus 79 ~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~----~~~~gt~~y~aPE 154 (424)
...+++.++..++.|++.||.|||+++ ++||||||+||+++.++.++|+|||++...... ....++..|+|||
T Consensus 109 --~~~l~~~~~~~i~~~l~~al~~LH~~~-i~H~dL~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE 185 (296)
T cd06655 109 --ETCMDEAQIAAVCRECLQALEFLHANQ-VIHRDIKSDNVLLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPE 185 (296)
T ss_pred --hcCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCCHHHEEECCCCCEEEccCccchhcccccccCCCcCCCccccCcc
Confidence 346899999999999999999999999 999999999999999999999999998765432 2346788999999
Q ss_pred ccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhh-hcccCCCCCchhHHHHHHHHHHhcccCcCCCC
Q 014478 155 YMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLM-DSALEGHFSNDEGTELVRLASRCLQSEARERP 233 (424)
Q Consensus 155 ~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rp 233 (424)
.+.+..++.++|||||||++|+|++|..||..... ... ..... ........+..+++.+.++|.+||..||++||
T Consensus 186 ~~~~~~~~~~~Dv~slGvil~~lltg~~pf~~~~~--~~~--~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp 261 (296)
T cd06655 186 VVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENP--LRA--LYLIATNGTPELQNPEKLSPIFRDFLNRCLEMDVEKRG 261 (296)
T ss_pred hhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH--HHH--HHHHHhcCCcccCCcccCCHHHHHHHHHHhhcChhhCC
Confidence 99988899999999999999999999988765311 111 11111 11112223455678899999999999999999
Q ss_pred CHHHHHHH
Q 014478 234 NAKSLVIS 241 (424)
Q Consensus 234 s~~~~~~~ 241 (424)
|+.+++.+
T Consensus 262 t~~~il~~ 269 (296)
T cd06655 262 SAKELLQH 269 (296)
T ss_pred CHHHHhhC
Confidence 99999865
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding |
| >cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-38 Score=287.41 Aligned_cols=233 Identities=15% Similarity=0.216 Sum_probs=191.8
Q ss_pred CCCcccceeeee--cceecccccCCCchhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHhHhccC
Q 014478 2 GGRCSKFSICWF--HCHLKSSVLESSDLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHW 79 (424)
Q Consensus 2 G~~g~v~~~~~~--~~~v~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~ 79 (424)
|++|.||.+.+. +..+++|.+..... .+.+.+|++++++++||||+++++++..+...+++|||+++++|.+++..
T Consensus 14 g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~l~~- 91 (256)
T cd06612 14 GSYGSVYKAIHKETGQVVAIKVVPVEED-LQEIIKEISILKQCDSPYIVKYYGSYFKNTDLWIVMEYCGAGSVSDIMKI- 91 (256)
T ss_pred CCCeEEEEEEEcCCCcEEEEEEeecHHH-HHHHHHHHHHHHhCCCCcEeeeeeeeecCCcEEEEEecCCCCcHHHHHHh-
Confidence 788999999884 46677777655443 67899999999999999999999999999999999999999999999864
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCCC----ccccCccCCCccc
Q 014478 80 ETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGK----SYSTNLAFTPPEY 155 (424)
Q Consensus 80 ~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~~----~~~gt~~y~aPE~ 155 (424)
....+++..+..++.|++.||.|||+.+ ++||||+|+||+++.++.++|+|||++....... ...++..|+|||+
T Consensus 92 ~~~~l~~~~~~~~~~~l~~~l~~lh~~~-i~H~dl~~~ni~~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~~PE~ 170 (256)
T cd06612 92 TNKTLTEEEIAAILYQTLKGLEYLHSNK-KIHRDIKAGNILLNEEGQAKLADFGVSGQLTDTMAKRNTVIGTPFWMAPEV 170 (256)
T ss_pred CccCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCCcceEEECCCCcEEEcccccchhcccCccccccccCCccccCHHH
Confidence 3567899999999999999999999999 9999999999999999999999999988655432 3457889999999
Q ss_pred cccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhh-hcccCCCCCchhHHHHHHHHHHhcccCcCCCCC
Q 014478 156 MRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLM-DSALEGHFSNDEGTELVRLASRCLQSEARERPN 234 (424)
Q Consensus 156 ~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps 234 (424)
+.+..++.++||||||+++|+|++|+.|+...... ....... ........+..++.++.+++.+||+.||++|||
T Consensus 171 ~~~~~~~~~~Di~s~G~il~~l~~g~~p~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps 246 (256)
T cd06612 171 IQEIGYNNKADIWSLGITAIEMAEGKPPYSDIHPM----RAIFMIPNKPPPTLSDPEKWSPEFNDFVKKCLVKDPEERPS 246 (256)
T ss_pred HhcCCCCchhhHHHHHHHHHHHHhCCCCCCCcchh----hhhhhhccCCCCCCCchhhcCHHHHHHHHHHHhcChhhCcC
Confidence 99888999999999999999999999887643111 1111100 011111233456678999999999999999999
Q ss_pred HHHHHHH
Q 014478 235 AKSLVIS 241 (424)
Q Consensus 235 ~~~~~~~ 241 (424)
+.+++.+
T Consensus 247 ~~~il~~ 253 (256)
T cd06612 247 AIQLLQH 253 (256)
T ss_pred HHHHhcC
Confidence 9999854
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a |
| >cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-38 Score=302.88 Aligned_cols=234 Identities=13% Similarity=0.160 Sum_probs=183.0
Q ss_pred CCCcccceeee--ecceecccccCCC---chhhhHHHHHHHHHhcCCCcCcceeEEEEEeCC------eeeEEEecCCCC
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESS---DLGETLNLEEAKAVGNLRSERLANLIGCCYEAD------ERLLVAEFMPNE 70 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~---~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~------~~~lv~e~~~~g 70 (424)
|+||.||.+.. .+..+++|++... ......+.+|+.+++.++||||+++++++.... ..++||||+++
T Consensus 28 G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~~lv~e~~~~- 106 (355)
T cd07874 28 GAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKSLEEFQDVYLVMELMDA- 106 (355)
T ss_pred cCCEEEEEEEecCCCceEEEEEeCCcccChHHHHHHHHHHHHHHHhCCCchhceeeeeeccccccccceeEEEhhhhcc-
Confidence 89999999876 5667788877543 233567788999999999999999999986542 46899999976
Q ss_pred CHHhHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCC---CccccC
Q 014478 71 TLAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG---KSYSTN 147 (424)
Q Consensus 71 sL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~---~~~~gt 147 (424)
+|.+.+. ..+++..+..++.|++.||.|||+++ |+||||||+|||++.++.+||+|||+++..... ....+|
T Consensus 107 ~l~~~~~----~~l~~~~~~~~~~qi~~aL~~LH~~g-ivHrDikp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~t 181 (355)
T cd07874 107 NLCQVIQ----MELDHERMSYLLYQMLCGIKHLHSAG-IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVT 181 (355)
T ss_pred cHHHHHh----hcCCHHHHHHHHHHHHHHHHHHHhCC-cccCCCChHHEEECCCCCEEEeeCcccccCCCccccCCcccc
Confidence 7777773 35889999999999999999999999 999999999999999999999999999865543 335689
Q ss_pred ccCCCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhh------------------hhHhhhccc----
Q 014478 148 LAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKN------------------FLLLMDSAL---- 205 (424)
Q Consensus 148 ~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~------------------~~~~~~~~~---- 205 (424)
..|+|||++.+..++.++|||||||++|+|++|+.||........-... .........
T Consensus 182 ~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (355)
T cd07874 182 RYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAG 261 (355)
T ss_pred CCccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhcHHHHHHHhcCCcccc
Confidence 9999999999888999999999999999999999888653211000000 000000000
Q ss_pred --------------CCCCCchhHHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 014478 206 --------------EGHFSNDEGTELVRLASRCLQSEARERPNAKSLVIS 241 (424)
Q Consensus 206 --------------~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~~~~~ 241 (424)
....+...+.++.++|.+||..||++|||+.+++++
T Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rps~~ell~h 311 (355)
T cd07874 262 LTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDEALQH 311 (355)
T ss_pred ccchhhccccccccccccccccchHHHHHHHHHhcCCchhcCCHHHHhcC
Confidence 000112235678999999999999999999999976
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok |
| >cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-38 Score=292.80 Aligned_cols=237 Identities=14% Similarity=0.134 Sum_probs=181.9
Q ss_pred CCCcccceeee--ecceecccccCCCc---hhhhHHHHHHHHHhcC---CCcCcceeEEEEEeC-----CeeeEEEecCC
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESSD---LGETLNLEEAKAVGNL---RSERLANLIGCCYEA-----DERLLVAEFMP 68 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~~---~~~~~~~~E~~~l~~l---~h~~iv~~~~~~~~~-----~~~~lv~e~~~ 68 (424)
|++|.||.+.+ .+..+++|.+.... .....+.+|+.+++.+ +||||+++++++... ...++||||++
T Consensus 11 g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~~~~~~lv~e~~~ 90 (288)
T cd07863 11 GAYGTVYKARDPHSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDRETKVTLVFEHVD 90 (288)
T ss_pred cCCeEEEEEEECCCCcEEEEEEeccCcCCCCCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCCCceEEEEEcccc
Confidence 89999999987 45667777664322 1223566777777766 699999999998652 34789999997
Q ss_pred CCCHHhHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCC---Cccc
Q 014478 69 NETLAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG---KSYS 145 (424)
Q Consensus 69 ~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~---~~~~ 145 (424)
+ +|.+++.......+++.++..++.|++.||.|||+++ ++||||||+||+++.++.+||+|||+++..... ....
T Consensus 91 ~-~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~-ivH~dikp~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~ 168 (288)
T cd07863 91 Q-DLRTYLDKVPPPGLPAETIKDLMRQFLRGLDFLHANC-IVHRDLKPENILVTSGGQVKLADFGLARIYSCQMALTPVV 168 (288)
T ss_pred c-CHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCCHHHEEECCCCCEEECccCccccccCcccCCCcc
Confidence 5 8999886544556999999999999999999999999 999999999999999999999999998865433 2346
Q ss_pred cCccCCCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhh--------c-------ccC----
Q 014478 146 TNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMD--------S-------ALE---- 206 (424)
Q Consensus 146 gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~--------~-------~~~---- 206 (424)
+|..|+|||++.+..++.++|||||||++|+|++|..||........... ...... . ...
T Consensus 169 ~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~~f~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (288)
T cd07863 169 VTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGK-IFDLIGLPPEDDWPRDVTLPRGAFSPRGP 247 (288)
T ss_pred ccccccCchHhhCCCCCCcchhhhHHHHHHHHHhCCcCcCCCCHHHHHHH-HHHHhCCCChhhCcccccccccccCCCCC
Confidence 78999999999988899999999999999999999977754321111000 000000 0 000
Q ss_pred ---CCCCchhHHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 014478 207 ---GHFSNDEGTELVRLASRCLQSEARERPNAKSLVIS 241 (424)
Q Consensus 207 ---~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~~~~~ 241 (424)
....+.++.++.+++.+||+.||++|||+.+++.+
T Consensus 248 ~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~~~l~h 285 (288)
T cd07863 248 RPVQSVVPEIEESGAQLLLEMLTFNPHKRISAFRALQH 285 (288)
T ss_pred CchHHhCcCcCHHHHHHHHHHhccCcccCCCHHHHhcC
Confidence 01112456788999999999999999999999854
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou |
| >cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.2e-38 Score=286.27 Aligned_cols=234 Identities=15% Similarity=0.161 Sum_probs=189.6
Q ss_pred CCCcccceeee--ecceecccccCCCc---hhhhHHHHHHHHHhcCCCcCcceeEEEEEe-CCeeeEEEecCCCCCHHhH
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESSD---LGETLNLEEAKAVGNLRSERLANLIGCCYE-ADERLLVAEFMPNETLAKH 75 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~~---~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-~~~~~lv~e~~~~gsL~~~ 75 (424)
|++|.||.+.. .+..+++|++.... ...+.+.+|++++++++|+||+++++.+.. +...+++|||+++++|.++
T Consensus 11 g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e~~~~~~l~~~ 90 (257)
T cd08223 11 GSYGEVSLVRHRTDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQLKHPNIVAYRESWEGEDGLLYIVMGFCEGGDLYHK 90 (257)
T ss_pred CCCeEEEEEEEcCCCcEEEEEEEehhhcCHHHHHHHHHHHHHHHhCCCCCeeeeeeeecCCCCEEEEEecccCCCcHHHH
Confidence 78999998887 34556766664322 335678899999999999999999998764 4457899999999999999
Q ss_pred hccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCC----CccccCccCC
Q 014478 76 LFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG----KSYSTNLAFT 151 (424)
Q Consensus 76 l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~----~~~~gt~~y~ 151 (424)
+.......+++.++..++.|++.||.+||+++ ++||||||+||+++.++.++|+|||++...... ....+++.|+
T Consensus 91 l~~~~~~~l~~~~~~~~~~~l~~~l~~lH~~~-i~H~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~ 169 (257)
T cd08223 91 LKEQKGKLLPENQVVEWFVQIAMALQYLHEKH-ILHRDLKTQNVFLTRTNIIKVGDLGIARVLENQCDMASTLIGTPYYM 169 (257)
T ss_pred HHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC-eeccCCCchhEEEecCCcEEEecccceEEecccCCccccccCCcCcc
Confidence 97644567899999999999999999999999 999999999999999999999999998765422 2345788999
Q ss_pred CccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHHHHHHHHHhcccCcCC
Q 014478 152 PPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARE 231 (424)
Q Consensus 152 aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~ 231 (424)
|||++.+..++.++||||||+++++|++|+.||........ ... .........+...++++.+++.+||+.||++
T Consensus 170 aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~----~~~-~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~ 244 (257)
T cd08223 170 SPELFSNKPYNYKSDVWALGCCVYEMATLKHAFNAKDMNSL----VYR-IIEGKLPPMPKDYSPELGELIATMLSKRPEK 244 (257)
T ss_pred ChhHhcCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHHHH----HHH-HHhcCCCCCccccCHHHHHHHHHHhccCccc
Confidence 99999988899999999999999999999988765321111 111 1112222345567889999999999999999
Q ss_pred CCCHHHHHHH
Q 014478 232 RPNAKSLVIS 241 (424)
Q Consensus 232 Rps~~~~~~~ 241 (424)
|||+.+++.+
T Consensus 245 Rp~~~~~l~~ 254 (257)
T cd08223 245 RPSVKSILRQ 254 (257)
T ss_pred CCCHHHHhcC
Confidence 9999999864
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown. |
| >cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.5e-38 Score=285.10 Aligned_cols=234 Identities=17% Similarity=0.182 Sum_probs=190.6
Q ss_pred CCCcccceeee--ecceecccccCCC---chhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHhHh
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESS---DLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHL 76 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~---~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~l 76 (424)
|++|.||.... .+..+++|.+... ......+.+|++++++++|+||+++++++.+.+..+++|||+++|+|.+++
T Consensus 11 g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~~~e~~~~~~L~~~~ 90 (256)
T cd08221 11 GAFGEATLYRRTEDDSLVVWKEVNLTRLSEKERRDALNEIVILSLLQHPNIIAYYNHFMDDNTLLIEMEYANGGTLYDKI 90 (256)
T ss_pred cCCceEEEEEEcCCCcEEEEEEEeecccchhHHHHHHHHHHHHHhCCCCCeeEEEeEEecCCeEEEEEEecCCCcHHHHH
Confidence 77887766554 5666666765432 344567889999999999999999999999999999999999999999999
Q ss_pred ccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCCC----ccccCccCCC
Q 014478 77 FHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGK----SYSTNLAFTP 152 (424)
Q Consensus 77 ~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~~----~~~gt~~y~a 152 (424)
.......+++.++..++.|++.+|.|||+.+ ++||||+|+||+++.++.+||+|||++....... ...++..|+|
T Consensus 91 ~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~-i~h~dl~p~ni~~~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~y~a 169 (256)
T cd08221 91 VRQKGQLFEEEMVLWYLFQIVSAVSYIHKAG-ILHRDIKTLNIFLTKAGLIKLGDFGISKILGSEYSMAETVVGTPYYMS 169 (256)
T ss_pred HhccccCCCHHHHHHHHHHHHHHHHHHHhCC-ccccCCChHhEEEeCCCCEEECcCcceEEcccccccccccCCCccccC
Confidence 7644567899999999999999999999999 9999999999999999999999999987654332 3467899999
Q ss_pred ccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHHHHHHHHHhcccCcCCC
Q 014478 153 PEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARER 232 (424)
Q Consensus 153 PE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~R 232 (424)
||.+.+..++.++||||||+++|+|++|..||....... ....... ......+..++.++.+++.+||..+|.+|
T Consensus 170 pe~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~----~~~~~~~-~~~~~~~~~~~~~~~~~i~~~l~~~p~~R 244 (256)
T cd08221 170 PELCQGVKYNFKSDIWALGCVLYELLTLKRTFDATNPLN----LVVKIVQ-GNYTPVVSVYSSELISLVHSLLQQDPEKR 244 (256)
T ss_pred HhhcCCCCCCCcchhHHHHHHHHHHHHCCCCCCCCCHHH----HHHHHHc-CCCCCCccccCHHHHHHHHHHcccCcccC
Confidence 999988888999999999999999999998876532111 1111111 11222335567889999999999999999
Q ss_pred CCHHHHHHH
Q 014478 233 PNAKSLVIS 241 (424)
Q Consensus 233 ps~~~~~~~ 241 (424)
||+.+++++
T Consensus 245 ~s~~~ll~~ 253 (256)
T cd08221 245 PTADEVLDQ 253 (256)
T ss_pred CCHHHHhhC
Confidence 999999875
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa |
| >KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-38 Score=302.47 Aligned_cols=184 Identities=15% Similarity=0.166 Sum_probs=166.1
Q ss_pred CCCcccceeee--ecceecccccCCCchhhhHHHHHHHHHhcCC-C-----cCcceeEEEEEeCCeeeEEEecCCCCCHH
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESSDLGETLNLEEAKAVGNLR-S-----ERLANLIGCCYEADERLLVAEFMPNETLA 73 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~~~~~~~~~~E~~~l~~l~-h-----~~iv~~~~~~~~~~~~~lv~e~~~~gsL~ 73 (424)
|+||.|.++++ ++..|++|+++....-..+...|+++|..|+ | -|+|+++++|...++.|||+|.+.. +|.
T Consensus 197 GtFGQVvk~~d~~T~e~VAIKIiKN~k~f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~fr~HlciVfELL~~-NLY 275 (586)
T KOG0667|consen 197 GSFGQVVKAYDHKTGEIVAIKIIKNKKRFLRQAQIEIRILELLNKHDPDDKYNIVRMLDYFYFRNHLCIVFELLST-NLY 275 (586)
T ss_pred cccceeEEEEecCCCcEEEEEeeccChHHHHHHHHHHHHHHHHhccCCCCCeeEEEeeeccccccceeeeehhhhh-hHH
Confidence 88999999988 6788999999888877777788999999996 4 3799999999999999999999955 999
Q ss_pred hHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCC--CeEEccccccccCCCCC-ccccCccC
Q 014478 74 KHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDG--NPRLSSFGLMKNSRDGK-SYSTNLAF 150 (424)
Q Consensus 74 ~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~--~~kl~Dfg~~~~~~~~~-~~~gt~~y 150 (424)
++++.+.-.+++...+..++.||+.+|.+||+.+ |||+||||+||||.+-+ .+||+|||.+....+.. ....+..|
T Consensus 276 ellK~n~f~Glsl~~ir~~~~Qil~~L~~L~~l~-IIHcDLKPENILL~~~~r~~vKVIDFGSSc~~~q~vytYiQSRfY 354 (586)
T KOG0667|consen 276 ELLKNNKFRGLSLPLVRKFAQQILTALLFLHELG-IIHCDLKPENILLKDPKRSRIKVIDFGSSCFESQRVYTYIQSRFY 354 (586)
T ss_pred HHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC-eeeccCChhheeeccCCcCceeEEecccccccCCcceeeeecccc
Confidence 9999888889999999999999999999999999 99999999999995443 69999999998766543 45678899
Q ss_pred CCccccccCCCCCCcceehhHHHHHHHhhCCCCCCch
Q 014478 151 TPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSH 187 (424)
Q Consensus 151 ~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~ 187 (424)
.|||++.+.+|+.+.|+||||||+.||++|.+.|++.
T Consensus 355 RAPEVILGlpY~~~IDmWSLGCIlAEL~tG~PLfpG~ 391 (586)
T KOG0667|consen 355 RAPEVILGLPYDTAIDMWSLGCILAELFTGEPLFPGD 391 (586)
T ss_pred ccchhhccCCCCCccceeehhhhHHhHhcCccccCCC
Confidence 9999999999999999999999999999999888875
|
|
| >cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-38 Score=297.61 Aligned_cols=234 Identities=18% Similarity=0.140 Sum_probs=185.7
Q ss_pred CCCcccceeee--ecceecccccCCC----chhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHhH
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESS----DLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKH 75 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~----~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~ 75 (424)
|++|.||.+.. .+..+++|++... ......+.+|+.++..++|+||+++++++..++..++||||++||+|.++
T Consensus 12 G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~g~~L~~~ 91 (331)
T cd05597 12 GAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNGDRRWITNLHYAFQDENNLYLVMDYYVGGDLLTL 91 (331)
T ss_pred cCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCceEEEEecCCeEEEEEecCCCCcHHHH
Confidence 89999998887 4667888877532 22345688899999999999999999999999999999999999999999
Q ss_pred hccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCCC-----ccccCccC
Q 014478 76 LFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGK-----SYSTNLAF 150 (424)
Q Consensus 76 l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~~-----~~~gt~~y 150 (424)
+.. ....+++..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||++....... ...||+.|
T Consensus 92 l~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~~-ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~gt~~y 169 (331)
T cd05597 92 LSK-FEDRLPEDMARFYLAEMVLAIDSVHQLG-YVHRDIKPDNVLLDKNGHIRLADFGSCLRLLADGTVQSNVAVGTPDY 169 (331)
T ss_pred HHH-hcCCCCHHHHHHHHHHHHHHHHHHHhCC-eEECCCCHHHEEECCCCCEEEEECCceeecCCCCCccccceeccccc
Confidence 964 2457899999999999999999999999 9999999999999999999999999987654322 23589999
Q ss_pred CCcccccc-----CCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhccc---CCCCCchhHHHHHHHHH
Q 014478 151 TPPEYMRT-----GRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSAL---EGHFSNDEGTELVRLAS 222 (424)
Q Consensus 151 ~aPE~~~~-----~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~l~~li~ 222 (424)
||||++.. +.++.++|||||||++|+|++|+.||......... ..+..... .......++.++.+++.
T Consensus 170 ~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~----~~i~~~~~~~~~~~~~~~~~~~~~~li~ 245 (331)
T cd05597 170 ISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETY----GKIMNHKEHFQFPPDVTDVSEEAKDLIR 245 (331)
T ss_pred cCHHHHhhccccccCCCCcceeehhhhHHHHHhhCCCCCCCCCHHHHH----HHHHcCCCcccCCCccCCCCHHHHHHHH
Confidence 99999873 35788999999999999999999888654221111 11111111 11112236788999999
Q ss_pred HhcccCcCC--CCCHHHHHHH
Q 014478 223 RCLQSEARE--RPNAKSLVIS 241 (424)
Q Consensus 223 ~cl~~dp~~--Rps~~~~~~~ 241 (424)
+||..++.. ||++.+++.+
T Consensus 246 ~ll~~~~~r~~r~~~~~~l~h 266 (331)
T cd05597 246 RLICSPETRLGRNGLQDFKDH 266 (331)
T ss_pred HHccCcccccCCCCHHHHhcC
Confidence 988654443 7899999987
|
Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy, |
| >cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.4e-38 Score=287.41 Aligned_cols=233 Identities=16% Similarity=0.194 Sum_probs=186.3
Q ss_pred CCCcccceeee--ecceecccccCCCc-hhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHhHhcc
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESSD-LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFH 78 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~ 78 (424)
|++|.||.+.+ .+..+++|++.... .....+.+|+.+++.++||||+++++++...+..++||||+++++|.+++..
T Consensus 20 g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~~~~l~h~~ii~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~ 99 (267)
T cd06645 20 GTYGDVYKARNVNTGELAAIKVIKLEPGEDFAVVQQEIIMMKDCKHSNIVAYFGSYLRRDKLWICMEFCGGGSLQDIYHV 99 (267)
T ss_pred CCCeEEEEEEEcCCCcEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEEeccCCCcHHHHHHh
Confidence 89999999987 45666777665433 2345678899999999999999999999999999999999999999999864
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCC----CccccCccCCCcc
Q 014478 79 WETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG----KSYSTNLAFTPPE 154 (424)
Q Consensus 79 ~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~----~~~~gt~~y~aPE 154 (424)
.+.+++.++..++.|++.||.|||+.+ ++|+||||+||+++.++.++|+|||++...... ....|+..|+|||
T Consensus 100 --~~~~~~~~~~~~~~~i~~~l~~lH~~~-i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE 176 (267)
T cd06645 100 --TGPLSESQIAYVSRETLQGLYYLHSKG-KMHRDIKGANILLTDNGHVKLADFGVSAQITATIAKRKSFIGTPYWMAPE 176 (267)
T ss_pred --cCCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCCHHHEEECCCCCEEECcceeeeEccCcccccccccCcccccChh
Confidence 457899999999999999999999999 999999999999999999999999998754322 3456889999999
Q ss_pred ccc---cCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhccc-CCC--CCchhHHHHHHHHHHhcccC
Q 014478 155 YMR---TGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSAL-EGH--FSNDEGTELVRLASRCLQSE 228 (424)
Q Consensus 155 ~~~---~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~-~~~--~~~~~~~~l~~li~~cl~~d 228 (424)
++. .+.++.++|+|||||++|+|++|..|+...... ........... ... ....++..+.+++.+||..|
T Consensus 177 ~~~~~~~~~~~~~~DvwSlG~il~~l~~~~~p~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~ 252 (267)
T cd06645 177 VAAVERKGGYNQLCDIWAVGITAIELAELQPPMFDLHPM----RALFLMTKSNFQPPKLKDKMKWSNSFHHFVKMALTKN 252 (267)
T ss_pred hhccccCCCCCchhhhHHHHHHHHHHhcCCCCcccccch----hhHHhhhccCCCCCcccccCCCCHHHHHHHHHHccCC
Confidence 974 456888999999999999999999776542110 00111111111 111 11235678999999999999
Q ss_pred cCCCCCHHHHHHH
Q 014478 229 ARERPNAKSLVIS 241 (424)
Q Consensus 229 p~~Rps~~~~~~~ 241 (424)
|++|||+++++.+
T Consensus 253 P~~R~~~~~ll~~ 265 (267)
T cd06645 253 PKKRPTAEKLLQH 265 (267)
T ss_pred chhCcCHHHHhcC
Confidence 9999999999854
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated |
| >KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.3e-39 Score=270.13 Aligned_cols=242 Identities=17% Similarity=0.169 Sum_probs=190.3
Q ss_pred CCCcccceeee--ecceeccccc-CCCchhhhHHHHHHHHHhcCCCcCcceeEEEEEeC-----CeeeEEEecCCCCCHH
Q 014478 2 GGRCSKFSICW--FHCHLKSSVL-ESSDLGETLNLEEAKAVGNLRSERLANLIGCCYEA-----DERLLVAEFMPNETLA 73 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~-~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~-----~~~~lv~e~~~~gsL~ 73 (424)
|||.-||.+.- .+.-.+.|++ ..+.++.+..++|++.-++++||||++++++...+ .+.||++.|...|||.
T Consensus 32 GGfsfv~LV~~~s~~~~YAlKkI~c~~~~~~e~~~rEid~~rkf~s~~vl~l~dh~l~~~~D~~~~~yll~Pyy~~Gsl~ 111 (302)
T KOG2345|consen 32 GGFSFVDLVKGLSTGHLYALKKILCHSQEDIEEALREIDNHRKFNSPNVLRLVDHQLREEKDGKHEAYLLLPYYKRGSLL 111 (302)
T ss_pred CCceeeeeecccCcccchhhheeeccchHHHHHHHHHHHHHHhhCCcchHHHHHHHHHhhccCceeEEEEeehhccccHH
Confidence 78888887763 4444565555 44557788999999999999999999999887543 3589999999999999
Q ss_pred hHhccC--CCCCCCHHHHHHHHHHHHHHHHHHHhCC-CcccccCCCCCeeecCCCCeEEccccccccCCCC---------
Q 014478 74 KHLFHW--ETQPMKWAMRLRVALYLAQALEYCSSKG-RALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG--------- 141 (424)
Q Consensus 74 ~~l~~~--~~~~l~~~~~~~i~~qi~~~L~~lH~~~-~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~--------- 141 (424)
+.+... ++..+++.++++|+.+||+||++||+.. |+.||||||.|||+++++.+++.|||.+....-.
T Consensus 112 d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH~~~~~yAH~DiKP~NILls~~~~~vl~D~GS~~~a~i~i~~~~~a~~ 191 (302)
T KOG2345|consen 112 DEIERLKIKGNFVSEAQILWIFLGICRGLEALHEKEPPYAHRDIKPANILLSDSGLPVLMDLGSATQAPIQIEGSRQALR 191 (302)
T ss_pred HHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHhccCCcccccCCCcceeEecCCCceEEEeccCccccceEeechHHHHH
Confidence 998643 3457999999999999999999999986 4999999999999999999999999987754411
Q ss_pred ----CccccCccCCCcccccc---CCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhh-hcccCCCCCchh
Q 014478 142 ----KSYSTNLAFTPPEYMRT---GRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLM-DSALEGHFSNDE 213 (424)
Q Consensus 142 ----~~~~gt~~y~aPE~~~~---~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 213 (424)
.+...|..|.|||.+.- ...+.++|||||||++|.|+.|..||.... -....+...+ ......+.....
T Consensus 192 lQe~a~e~Ct~pyRAPELf~vk~~~ti~ertDIWSLGCtLYa~mf~~sPfe~~~---~~GgSlaLAv~n~q~s~P~~~~y 268 (302)
T KOG2345|consen 192 LQEWAEERCTIPYRAPELFNVKSHCTITERTDIWSLGCTLYAMMFGESPFERIY---QQGGSLALAVQNAQISIPNSSRY 268 (302)
T ss_pred HHHHHHHhCCCcccCchheecccCcccccccchhhhhHHHHHHHHcCCcchHHh---hcCCeEEEeeeccccccCCCCCc
Confidence 12245899999998863 357889999999999999999998876421 1222221111 112222333447
Q ss_pred HHHHHHHHHHhcccCcCCCCCHHHHHHHHHHHh
Q 014478 214 GTELVRLASRCLQSEARERPNAKSLVISLMSLQ 246 (424)
Q Consensus 214 ~~~l~~li~~cl~~dp~~Rps~~~~~~~l~~~~ 246 (424)
++.+.++|+.||+.||.+||++.+++..+..+.
T Consensus 269 se~l~~lik~mlqvdP~qRP~i~~ll~~~d~Li 301 (302)
T KOG2345|consen 269 SEALHQLIKSMLQVDPNQRPTIPELLSKLDDLI 301 (302)
T ss_pred cHHHHHHHHHHhcCCcccCCCHHHHHHHHHhhc
Confidence 899999999999999999999999999887653
|
|
| >cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-38 Score=295.47 Aligned_cols=237 Identities=16% Similarity=0.232 Sum_probs=185.2
Q ss_pred CCCcccceeee--ecceecccccCCCc--hhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHhHhc
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESSD--LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLF 77 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~~--~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~ 77 (424)
|++|.||++.+ .+..+++|++.... .....+.+|++++++++||||+++++++..++..++||||+++ +|.+++.
T Consensus 17 G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~-~l~~~~~ 95 (309)
T cd07872 17 GTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIVHTDKSLTLVFEYLDK-DLKQYMD 95 (309)
T ss_pred cCCEEEEEEEecCCCCeEEEEEeeccccCCcchhHHHHHHHHHhCCCCCcceEEEEEeeCCeEEEEEeCCCC-CHHHHHH
Confidence 89999999987 45567777665332 2345678899999999999999999999999999999999976 8888875
Q ss_pred cCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCC----CccccCccCCCc
Q 014478 78 HWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG----KSYSTNLAFTPP 153 (424)
Q Consensus 78 ~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~----~~~~gt~~y~aP 153 (424)
. .+..+++..+..++.|++.||.|||+++ |+||||||+||+++.++.+||+|||+++..... ....+|..|+||
T Consensus 96 ~-~~~~~~~~~~~~~~~qi~~aL~~lH~~~-ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aP 173 (309)
T cd07872 96 D-CGNIMSMHNVKIFLYQILRGLAYCHRRK-VLHRDLKPQNLLINERGELKLADFGLARAKSVPTKTYSNEVVTLWYRPP 173 (309)
T ss_pred h-cCCCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCCHHHEEECCCCCEEECccccceecCCCccccccccccccccCC
Confidence 4 3456899999999999999999999999 999999999999999999999999998754322 234578899999
Q ss_pred ccccc-CCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhh-----------Hh------hhcccCC-------C
Q 014478 154 EYMRT-GRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFL-----------LL------MDSALEG-------H 208 (424)
Q Consensus 154 E~~~~-~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~-----------~~------~~~~~~~-------~ 208 (424)
|.+.+ ..++.++|||||||++|+|++|+.||+............. .. ....... .
T Consensus 174 E~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (309)
T cd07872 174 DVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGSTVEDELHLIFRLLGTPTEETWPGISSNDEFKNYNFPKYKPQPLIN 253 (309)
T ss_pred HHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhhcchhhhhhhhcCccCCCchhh
Confidence 99875 4578899999999999999999988875422111000000 00 0000000 0
Q ss_pred CCchhHHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 014478 209 FSNDEGTELVRLASRCLQSEARERPNAKSLVIS 241 (424)
Q Consensus 209 ~~~~~~~~l~~li~~cl~~dp~~Rps~~~~~~~ 241 (424)
....+++++.++|.+||..||.+|||+.+++.+
T Consensus 254 ~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h 286 (309)
T cd07872 254 HAPRLDTEGIELLTKFLQYESKKRISAEEAMKH 286 (309)
T ss_pred hccCCCHHHHHHHHHhccCChhhCCCHHHHhcC
Confidence 112357789999999999999999999999875
|
Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play |
| >cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.7e-38 Score=288.15 Aligned_cols=238 Identities=18% Similarity=0.240 Sum_probs=189.0
Q ss_pred CCCCcccceeeeec-------ceecccccCCCch--hhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCC
Q 014478 1 MGGRCSKFSICWFH-------CHLKSSVLESSDL--GETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNET 71 (424)
Q Consensus 1 ~G~~g~v~~~~~~~-------~~v~~~~~~~~~~--~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gs 71 (424)
.||+|.||.+.+.. ..+++|.+..... ..+.+.+|++++++++||||+++++++......++||||+++|+
T Consensus 15 ~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~ 94 (275)
T cd05046 15 RGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDENLQSEFRRELDMFRKLSHKNVVRLLGLCREAEPHYMILEYTDLGD 94 (275)
T ss_pred ccceeEEEEEEeccCCcCCCcceEEEEccCCccchHHHHHHHHHHHHHHhcCCcceeeeEEEECCCCcceEEEEecCCCc
Confidence 38999999998732 3355565544332 35689999999999999999999999999888999999999999
Q ss_pred HHhHhccCCC-------CCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCC---
Q 014478 72 LAKHLFHWET-------QPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG--- 141 (424)
Q Consensus 72 L~~~l~~~~~-------~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~--- 141 (424)
|.+++..... ..+++..+..++.|++.||.|||+++ ++||||||+||+++.++.++++|||+++.....
T Consensus 95 L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~-i~H~dlkp~Nili~~~~~~~l~~~~~~~~~~~~~~~ 173 (275)
T cd05046 95 LKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSNAR-FVHRDLAARNCLVSSQREVKVSLLSLSKDVYNSEYY 173 (275)
T ss_pred HHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhhcC-cccCcCccceEEEeCCCcEEEcccccccccCccccc
Confidence 9999965321 16899999999999999999999999 999999999999999999999999998754322
Q ss_pred --CccccCccCCCccccccCCCCCCcceehhHHHHHHHhh-CCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHHHH
Q 014478 142 --KSYSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELV 218 (424)
Q Consensus 142 --~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 218 (424)
....++..|+|||.+.+...+.++||||||+++|+|++ |..||..... ................+..++..+.
T Consensus 174 ~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~~~~~p~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~l~ 249 (275)
T cd05046 174 KLRNALIPLRWLAPEAVQEDDFSTKSDVWSFGVLMWEVFTQGELPFYGLSD----EEVLNRLQAGKLELPVPEGCPSRLY 249 (275)
T ss_pred ccCCceeEEeecChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCccccch----HHHHHHHHcCCcCCCCCCCCCHHHH
Confidence 22345677999999988888999999999999999998 5655543211 1111111111222233456778999
Q ss_pred HHHHHhcccCcCCCCCHHHHHHHHH
Q 014478 219 RLASRCLQSEARERPNAKSLVISLM 243 (424)
Q Consensus 219 ~li~~cl~~dp~~Rps~~~~~~~l~ 243 (424)
+++.+||..||++|||+.+++..|.
T Consensus 250 ~~i~~~l~~~p~~Rp~~~~~l~~l~ 274 (275)
T cd05046 250 KLMTRCWAVNPKDRPSFSELVSALG 274 (275)
T ss_pred HHHHHHcCCCcccCCCHHHHHHHhc
Confidence 9999999999999999999998875
|
Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s |
| >cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.3e-38 Score=288.17 Aligned_cols=231 Identities=16% Similarity=0.245 Sum_probs=190.9
Q ss_pred CCCcccceeee--ecceecccccCCCc--hhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHhHhc
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESSD--LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLF 77 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~~--~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~ 77 (424)
|++|.||++.+ .+..+++|++.... .....+.+|+++++.++|+||+++++++..+...++|+||+++++|.+++.
T Consensus 12 g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~ 91 (274)
T cd06609 12 GSFGEVYKAIDKRTNQVVAIKVIDLEEAEDEIEDIQQEIQFLSQCRSPYITKYYGSFLKGSKLWIIMEYCGGGSCLDLLK 91 (274)
T ss_pred CCCeEEEEEEECCCCeEEEEEEeeccccchHHHHHHHHHHHHHHcCCCCeeeeeEEEEECCeEEEEEEeeCCCcHHHHHh
Confidence 88999999987 45667777665432 335678899999999999999999999999999999999999999999995
Q ss_pred cCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCC----CccccCccCCCc
Q 014478 78 HWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG----KSYSTNLAFTPP 153 (424)
Q Consensus 78 ~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~----~~~~gt~~y~aP 153 (424)
. .++++..+..++.|++.||.|||+++ ++||||+|+||+++.++.++|+|||+++..... ....++..|+||
T Consensus 92 ~---~~~~~~~~~~~~~ql~~~l~~lh~~~-i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~y~~P 167 (274)
T cd06609 92 P---GKLDETYIAFILREVLLGLEYLHEEG-KIHRDIKAANILLSEEGDVKLADFGVSGQLTSTMSKRNTFVGTPFWMAP 167 (274)
T ss_pred h---cCCCHHHHHHHHHHHHHHHHHHHhCC-cccCCCCHHHEEECCCCCEEEcccccceeecccccccccccCCccccCh
Confidence 3 38899999999999999999999999 999999999999999999999999998776533 234678889999
Q ss_pred cccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhcccCCCCCch-hHHHHHHHHHHhcccCcCCC
Q 014478 154 EYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSND-EGTELVRLASRCLQSEARER 232 (424)
Q Consensus 154 E~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~li~~cl~~dp~~R 232 (424)
|.+.+..++.++||||||+++|+|++|..|+..... ......+........+.. +++++.+++.+||..||++|
T Consensus 168 E~~~~~~~~~~sDv~slG~il~~l~tg~~p~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~p~~R 242 (274)
T cd06609 168 EVIKQSGYDEKADIWSLGITAIELAKGEPPLSDLHP-----MRVLFLIPKNNPPSLEGNKFSKPFKDFVSLCLNKDPKER 242 (274)
T ss_pred hhhccCCCCchhhHHHHHHHHHHHHhCCCCcccCch-----HHHHHHhhhcCCCCCcccccCHHHHHHHHHHhhCChhhC
Confidence 999988899999999999999999999987754311 111111111222222223 67889999999999999999
Q ss_pred CCHHHHHHH
Q 014478 233 PNAKSLVIS 241 (424)
Q Consensus 233 ps~~~~~~~ 241 (424)
||+++++.+
T Consensus 243 pt~~~il~~ 251 (274)
T cd06609 243 PSAKELLKH 251 (274)
T ss_pred cCHHHHhhC
Confidence 999999865
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN) |
| >cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-38 Score=303.82 Aligned_cols=237 Identities=16% Similarity=0.168 Sum_probs=186.1
Q ss_pred CCCcccceeee--ecceecccccCCC---chhhhHHHHHHHHHhcCCCcCcceeEEEEEeCC-----eeeEEEecCCCCC
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESS---DLGETLNLEEAKAVGNLRSERLANLIGCCYEAD-----ERLLVAEFMPNET 71 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~---~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-----~~~lv~e~~~~gs 71 (424)
|++|.||.+.. .+..+++|++... ....+.+.+|+++++.++||||+++++++.... ..++||||+. ++
T Consensus 11 G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e~~~-~~ 89 (372)
T cd07853 11 GAFGVVWSVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDPFEEIYVVTELMQ-SD 89 (372)
T ss_pred CCCEEEEEEEECCCCCEEEEEeccccccchHHHHHHHHHHHHHHhCCCCCcCCHhheecCCCccccceEEEEeeccc-cC
Confidence 89999999986 5677888877543 233567889999999999999999999998776 7899999996 58
Q ss_pred HHhHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCC-----Ccccc
Q 014478 72 LAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG-----KSYST 146 (424)
Q Consensus 72 L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~-----~~~~g 146 (424)
|.+++.. ...+++..+..++.||+.||.|||+++ ++||||||+|||++.++.+||+|||+++..... ....+
T Consensus 90 l~~~~~~--~~~l~~~~~~~~~~qi~~aL~~LH~~~-ivH~dlkp~Nili~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~ 166 (372)
T cd07853 90 LHKIIVS--PQPLSSDHVKVFLYQILRGLKYLHSAG-ILHRDIKPGNLLVNSNCVLKICDFGLARVEEPDESKHMTQEVV 166 (372)
T ss_pred HHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHhCC-eeCCCCChHHEEECCCCCEEeccccceeecccCccccCCCCCc
Confidence 8888754 467999999999999999999999999 999999999999999999999999998764422 22356
Q ss_pred CccCCCccccccC-CCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhh------------------hhhHhh-hcccC
Q 014478 147 NLAFTPPEYMRTG-RVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSK------------------NFLLLM-DSALE 206 (424)
Q Consensus 147 t~~y~aPE~~~~~-~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~------------------~~~~~~-~~~~~ 206 (424)
|..|+|||.+.+. .++.++|||||||++|||++|+.||........-.. .....+ .....
T Consensus 167 ~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 246 (372)
T cd07853 167 TQYYRAPEILMGSRHYTSAVDIWSVGCIFAELLGRRILFQAQSPIQQLDLITDLLGTPSLEAMRSACEGARAHILRGPHK 246 (372)
T ss_pred CCCcCCHHHHcCCCCCCcHHHHHhHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHHhhHHHHHHHHhCCCC
Confidence 8899999999864 478999999999999999999988865321100000 000000 00000
Q ss_pred -------CCCCchhHHHHHHHHHHhcccCcCCCCCHHHHHHHH
Q 014478 207 -------GHFSNDEGTELVRLASRCLQSEARERPNAKSLVISL 242 (424)
Q Consensus 207 -------~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~~~~~l 242 (424)
.......++++.++|.+||+.||++|||+.+++.+-
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp 289 (372)
T cd07853 247 PPSLPVLYTLSSQATHEAVHLLCRMLVFDPDKRISAADALAHP 289 (372)
T ss_pred CCchHHhcccCCCCCHHHHHHHHHhCCCChhhCcCHHHHhcCH
Confidence 012233467899999999999999999999999764
|
Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription |
| >KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-37 Score=286.04 Aligned_cols=223 Identities=16% Similarity=0.276 Sum_probs=191.8
Q ss_pred eeecceecccccCCCch---hhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHhHhccCCCCCCCHH
Q 014478 11 CWFHCHLKSSVLESSDL---GETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQPMKWA 87 (424)
Q Consensus 11 ~~~~~~v~~~~~~~~~~---~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~ 87 (424)
++.|..|++|++.+... ....+++|++.|+-++|||||++|.+......+|||.|+-++|+|.+||.+. ..++.+.
T Consensus 40 VFTGekVAVKviDKTKlD~~st~hlfqEVRCMKLVQHpNiVRLYEViDTQTKlyLiLELGD~GDl~DyImKH-e~Gl~E~ 118 (864)
T KOG4717|consen 40 VFTGEKVAVKVIDKTKLDTLSTGHLFQEVRCMKLVQHPNIVRLYEVIDTQTKLYLILELGDGGDLFDYIMKH-EEGLNED 118 (864)
T ss_pred hcccceeEEEEecccccchhhhhHHHHHHHHHHHhcCcCeeeeeehhcccceEEEEEEecCCchHHHHHHhh-hccccHH
Confidence 45889999999976553 3567889999999999999999999999988999999999999999999874 4568999
Q ss_pred HHHHHHHHHHHHHHHHHhCCCcccccCCCCCeee-cCCCCeEEccccccccCCCC---CccccCccCCCccccccCCCCC
Q 014478 88 MRLRVALYLAQALEYCSSKGRALYHDLNAYRILF-DKDGNPRLSSFGLMKNSRDG---KSYSTNLAFTPPEYMRTGRVTP 163 (424)
Q Consensus 88 ~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill-~~~~~~kl~Dfg~~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~ 163 (424)
.+.+++.||+.|+.|+|+.+ +|||||||+|+.+ ..-|-|||+|||++....++ ...+|+..|.|||.+.+..|+.
T Consensus 119 La~kYF~QI~~AI~YCHqLH-VVHRDLKPENVVFFEKlGlVKLTDFGFSNkf~PG~kL~TsCGSLAYSAPEILLGDsYDA 197 (864)
T KOG4717|consen 119 LAKKYFAQIVHAISYCHQLH-VVHRDLKPENVVFFEKLGLVKLTDFGFSNKFQPGKKLTTSCGSLAYSAPEILLGDSYDA 197 (864)
T ss_pred HHHHHHHHHHHHHHHHhhhh-hhcccCCcceeEEeeecCceEeeeccccccCCCcchhhcccchhhccCchhhhcCccCC
Confidence 99999999999999999999 9999999999876 67789999999999877766 4568999999999999999865
Q ss_pred -CcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 014478 164 -ESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERPNAKSLVIS 241 (424)
Q Consensus 164 -~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~~~~~ 241 (424)
..|||||||+||-|++|+.||... ...+.+..+++=. -..|..++.++++||..||..||.+|.|.++|...
T Consensus 198 PAVDiWSLGVILyMLVCGq~PFqeA----NDSETLTmImDCK--YtvPshvS~eCrdLI~sMLvRdPkkRAslEeI~s~ 270 (864)
T KOG4717|consen 198 PAVDIWSLGVILYMLVCGQPPFQEA----NDSETLTMIMDCK--YTVPSHVSKECRDLIQSMLVRDPKKRASLEEIVST 270 (864)
T ss_pred cchhhhHHHHHHHHHHhCCCccccc----cchhhhhhhhccc--ccCchhhhHHHHHHHHHHHhcCchhhccHHHHhcc
Confidence 789999999999999999888764 2223333344322 24677889999999999999999999999999743
|
|
| >cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.9e-38 Score=287.00 Aligned_cols=235 Identities=15% Similarity=0.207 Sum_probs=187.0
Q ss_pred CCCcccceeeee--cceecccccCCCc-hhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHhHhcc
Q 014478 2 GGRCSKFSICWF--HCHLKSSVLESSD-LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFH 78 (424)
Q Consensus 2 G~~g~v~~~~~~--~~~v~~~~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~ 78 (424)
|++|.||++.+. +..+++|.+.... ...+.+.+|+.+++.++|+||+++++++..++..++||||+++++|.+++..
T Consensus 19 g~~g~v~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~ 98 (268)
T cd06624 19 GTYGIVYAARDLSTQVRIAIKEIPERDSRYVQPLHEEIALHSYLKHRNIVQYLGSDSENGFFKIFMEQVPGGSLSALLRS 98 (268)
T ss_pred CCceEEEEeEecCCCcEEEEEEecCCCHHHHHHHHHHHHHHHhcCCCCeeeeeeeeccCCEEEEEEecCCCCCHHHHHHH
Confidence 889999999874 3456666654433 3456889999999999999999999999999999999999999999999864
Q ss_pred CCCCCC--CHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecC-CCCeEEccccccccCCCC----CccccCccCC
Q 014478 79 WETQPM--KWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDK-DGNPRLSSFGLMKNSRDG----KSYSTNLAFT 151 (424)
Q Consensus 79 ~~~~~l--~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~-~~~~kl~Dfg~~~~~~~~----~~~~gt~~y~ 151 (424)
. ..++ ++..+..++.||+.||.|||+++ ++||||||+||+++. ++.++|+|||++...... ....++..|+
T Consensus 99 ~-~~~~~~~~~~~~~~~~qi~~al~~lH~~~-i~h~dl~p~nil~~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~ 176 (268)
T cd06624 99 K-WGPLKDNEQTIIFYTKQILEGLKYLHDNQ-IVHRDIKGDNVLVNTYSGVVKISDFGTSKRLAGINPCTETFTGTLQYM 176 (268)
T ss_pred h-cccCCCcHHHHHHHHHHHHHHHHHHHHCC-EeecCCCHHHEEEcCCCCeEEEecchhheecccCCCccccCCCCcccc
Confidence 2 2345 78889999999999999999999 999999999999976 678999999998754322 2345788999
Q ss_pred CccccccCC--CCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHHHHHHHHHhcccCc
Q 014478 152 PPEYMRTGR--VTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEA 229 (424)
Q Consensus 152 aPE~~~~~~--~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp 229 (424)
|||.+.... ++.++||||||+++|+|++|..|+........ ..............+..+++++.+++.+||+.+|
T Consensus 177 aPE~~~~~~~~~~~~~Dv~slGvvl~~l~~g~~p~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p 253 (268)
T cd06624 177 APEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPFIELGEPQA---AMFKVGMFKIHPEIPESLSAEAKNFILRCFEPDP 253 (268)
T ss_pred ChhhhccccccCCchhhhHHHHHHHHHHHhCCCCCccccChhh---hHhhhhhhccCCCCCcccCHHHHHHHHHHcCCCc
Confidence 999987543 78899999999999999999987754211100 0001111112233455678899999999999999
Q ss_pred CCCCCHHHHHHH
Q 014478 230 RERPNAKSLVIS 241 (424)
Q Consensus 230 ~~Rps~~~~~~~ 241 (424)
++|||+.+++.+
T Consensus 254 ~~Rpt~~~ll~~ 265 (268)
T cd06624 254 DKRASAHDLLQD 265 (268)
T ss_pred hhCCCHHHHHhC
Confidence 999999999865
|
Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina |
| >cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-38 Score=301.43 Aligned_cols=234 Identities=13% Similarity=0.168 Sum_probs=182.9
Q ss_pred CCCcccceeee--ecceecccccCCC---chhhhHHHHHHHHHhcCCCcCcceeEEEEEeC------CeeeEEEecCCCC
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESS---DLGETLNLEEAKAVGNLRSERLANLIGCCYEA------DERLLVAEFMPNE 70 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~---~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~------~~~~lv~e~~~~g 70 (424)
|++|.||.+.+ .+..+++|++... ......+.+|+.+++.++||||+++++++... ...++||||+++
T Consensus 35 G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~~~~~~~~lv~e~~~~- 113 (364)
T cd07875 35 GAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDA- 113 (364)
T ss_pred CCCeEEEEEEECCCCcEEEEEEeCccccCchhHHHHHHHHHHHHhcCCCCccccceeecccccccccCeEEEEEeCCCC-
Confidence 89999999986 5667788877543 23356788999999999999999999987643 347899999975
Q ss_pred CHHhHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCC---CccccC
Q 014478 71 TLAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG---KSYSTN 147 (424)
Q Consensus 71 sL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~---~~~~gt 147 (424)
+|.+++. ..+++..+..++.|++.||.|||+++ |+||||||+|||++.++.+||+|||+++..... ....+|
T Consensus 114 ~l~~~~~----~~~~~~~~~~~~~qi~~aL~~LH~~~-ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~t 188 (364)
T cd07875 114 NLCQVIQ----MELDHERMSYLLYQMLCGIKHLHSAG-IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVT 188 (364)
T ss_pred CHHHHHH----hcCCHHHHHHHHHHHHHHHHHHhhCC-eecCCCCHHHEEECCCCcEEEEeCCCccccCCCCcccCCccc
Confidence 7888773 35889999999999999999999999 999999999999999999999999999865543 334689
Q ss_pred ccCCCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhh------------------Hhhhccc----
Q 014478 148 LAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFL------------------LLMDSAL---- 205 (424)
Q Consensus 148 ~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~------------------~~~~~~~---- 205 (424)
..|+|||++.+..++.++|||||||++|+|++|+.||+.......-..... .......
T Consensus 189 ~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (364)
T cd07875 189 RYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKYAG 268 (364)
T ss_pred CCcCCHHHHhCCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHhhhHHHHHHHhhCCCcCC
Confidence 999999999988899999999999999999999988875321110000000 0000000
Q ss_pred --------------CCCCCchhHHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 014478 206 --------------EGHFSNDEGTELVRLASRCLQSEARERPNAKSLVIS 241 (424)
Q Consensus 206 --------------~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~~~~~ 241 (424)
........+.++.++|.+||..||.+|||+.+++++
T Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~t~~e~L~h 318 (364)
T cd07875 269 YSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQH 318 (364)
T ss_pred CChHhhCccccccccccccccccHHHHHHHHHhcCcCcccCCCHHHHhcC
Confidence 000011124578999999999999999999999876
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn |
| >KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-38 Score=295.67 Aligned_cols=242 Identities=19% Similarity=0.244 Sum_probs=194.8
Q ss_pred CCCcccceeeeec-ceecccccCCCc--hhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHhHhcc
Q 014478 2 GGRCSKFSICWFH-CHLKSSVLESSD--LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFH 78 (424)
Q Consensus 2 G~~g~v~~~~~~~-~~v~~~~~~~~~--~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~ 78 (424)
|=||.|-.....+ ..||+|.+.... ..+..|.+|+++|.+|+||||++++|+|..++.+++||||+++|+|..++..
T Consensus 549 GqFGEVhLCeveg~lkVAVK~Lr~~a~~~~r~~F~kEIkiLsqLkhPNIveLvGVC~~DePicmI~EYmEnGDLnqFl~a 628 (807)
T KOG1094|consen 549 GQFGEVHLCEVEGPLKVAVKILRPDATKNARNDFLKEIKILSRLKHPNIVELLGVCVQDDPLCMITEYMENGDLNQFLSA 628 (807)
T ss_pred cccceeEEEEecCceEEEEeecCcccchhHHHHHHHHHHHHhccCCCCeeEEEeeeecCCchHHHHHHHhcCcHHHHHHh
Confidence 4566666655555 778888886544 4568999999999999999999999999999999999999999999999987
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCCCcc------ccCccCCC
Q 014478 79 WETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSY------STNLAFTP 152 (424)
Q Consensus 79 ~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~~~~------~gt~~y~a 152 (424)
.....+.....++|+.||+.||+||.+-+ +|||||.+.|||++.++++||+|||.++..-.+... .-.+.|||
T Consensus 629 heapt~~t~~~vsi~tqiasgmaYLes~n-fVHrd~a~rNcLv~~e~~iKiadfgmsR~lysg~yy~vqgr~vlpiRwma 707 (807)
T KOG1094|consen 629 HELPTAETAPGVSICTQIASGMAYLESLN-FVHRDLATRNCLVDGEFTIKIADFGMSRNLYSGDYYRVQGRAVLPIRWMA 707 (807)
T ss_pred ccCcccccchhHHHHHHHHHHHHHHHhhc-hhhccccccceeecCcccEEecCcccccccccCCceeeecceeeeeeehh
Confidence 54444566778899999999999999999 999999999999999999999999999976655433 33689999
Q ss_pred ccccccCCCCCCcceehhHHHHHHHhh--CCCCCCchhhHHHhhhhhhHhhhc---ccCCCCCchhHHHHHHHHHHhccc
Q 014478 153 PEYMRTGRVTPESVVYSFGTMLLDLLS--GKHIPPSHALDLIRSKNFLLLMDS---ALEGHFSNDEGTELVRLASRCLQS 227 (424)
Q Consensus 153 PE~~~~~~~~~~~Dv~slG~~l~el~~--g~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~l~~li~~cl~~ 227 (424)
||.+..++++.+||||+||+++||+++ ...|+.....+....+ ...+.+. ......|.-|+.++.+++.+||+.
T Consensus 708 wEsillgkFttaSDvWafgvTlwE~~~~C~e~Py~~lt~e~vven-~~~~~~~~~~~~~l~~P~~cp~~lyelml~Cw~~ 786 (807)
T KOG1094|consen 708 WESILLGKFTTASDVWAFGVTLWEVFMLCREQPYSQLTDEQVVEN-AGEFFRDQGRQVVLSRPPACPQGLYELMLRCWRR 786 (807)
T ss_pred HHHHHhccccchhhhhhhHHHHHHHHHHHhhCchhhhhHHHHHHh-hhhhcCCCCcceeccCCCcCcHHHHHHHHHHhch
Confidence 999999999999999999999999865 4455544322211111 1111111 122234667899999999999999
Q ss_pred CcCCCCCHHHHHHHHHHH
Q 014478 228 EARERPNAKSLVISLMSL 245 (424)
Q Consensus 228 dp~~Rps~~~~~~~l~~~ 245 (424)
|-.+|||++++...|++.
T Consensus 787 es~~RPsFe~lh~~lq~~ 804 (807)
T KOG1094|consen 787 ESEQRPSFEQLHLFLQED 804 (807)
T ss_pred hhhcCCCHHHHHHHHHHh
Confidence 999999999999888764
|
|
| >cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.6e-38 Score=294.57 Aligned_cols=235 Identities=20% Similarity=0.200 Sum_probs=190.9
Q ss_pred CCCcccceeeee--cceecccccCCCc----hhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHhH
Q 014478 2 GGRCSKFSICWF--HCHLKSSVLESSD----LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKH 75 (424)
Q Consensus 2 G~~g~v~~~~~~--~~~v~~~~~~~~~----~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~ 75 (424)
|++|.||.+... +..+++|.+.... ...+.+..|+++++.++||||+++++.+..+...++||||+.|++|.++
T Consensus 12 g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~ 91 (316)
T cd05574 12 GDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDHPFLPTLYASFQTETYLCLVMDYCPGGELFRL 91 (316)
T ss_pred CccEEEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCCCCCchhheeeeecCCEEEEEEEecCCCCHHHH
Confidence 889999999874 5667777665433 2345788999999999999999999999999999999999999999999
Q ss_pred hccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCC--------------
Q 014478 76 LFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG-------------- 141 (424)
Q Consensus 76 l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~-------------- 141 (424)
+....+..+++..+..++.|++.||.|||+.+ ++||||||+||+++.++.++|+|||++......
T Consensus 92 ~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~-i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~ 170 (316)
T cd05574 92 LQRQPGKCLSEEVARFYAAEVLLALEYLHLLG-IVYRDLKPENILLHESGHIMLSDFDLSKQSDVEPPPVSKALRKGSRR 170 (316)
T ss_pred HHhCCCCccCHHHHHHHHHHHHHHHHHHHHCC-eeccCCChHHeEEcCCCCEEEeecchhhccccccccccccccccccc
Confidence 87544567999999999999999999999999 999999999999999999999999987654321
Q ss_pred -------------------CccccCccCCCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhh
Q 014478 142 -------------------KSYSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMD 202 (424)
Q Consensus 142 -------------------~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~ 202 (424)
....||..|+|||++.+..++.++||||||+++|+|++|..||...... ..+.....
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~----~~~~~~~~ 246 (316)
T cd05574 171 SSVNSIPSETFSEEPSFRSNSFVGTEEYIAPEVISGDGHGSAVDWWTLGILLYEMLYGTTPFKGSNRD----ETFSNILK 246 (316)
T ss_pred ccccccchhhhcccccCCCCCCcCccCCcCHHHHcCCCCCchHHHHHHHHHHHHHhhCCCCCCCCchH----HHHHHHhc
Confidence 1235688899999999888999999999999999999999887654221 11222222
Q ss_pred cccCCCCCchhHHHHHHHHHHhcccCcCCCCC----HHHHHHH
Q 014478 203 SALEGHFSNDEGTELVRLASRCLQSEARERPN----AKSLVIS 241 (424)
Q Consensus 203 ~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps----~~~~~~~ 241 (424)
...........+.++.+++.+||..||++||| +++++.+
T Consensus 247 ~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~ll~~ 289 (316)
T cd05574 247 KEVTFPGSPPVSSSARDLIRKLLVKDPSKRLGSKRGAAEIKQH 289 (316)
T ss_pred CCccCCCccccCHHHHHHHHHHccCCHhHCCCchhhHHHHHcC
Confidence 22221222236889999999999999999999 7777764
|
Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin |
| >PHA03207 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-38 Score=304.60 Aligned_cols=232 Identities=15% Similarity=0.173 Sum_probs=181.9
Q ss_pred CCCcccceeeeec----ceecccccCCCchhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHhHhc
Q 014478 2 GGRCSKFSICWFH----CHLKSSVLESSDLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLF 77 (424)
Q Consensus 2 G~~g~v~~~~~~~----~~v~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~ 77 (424)
|++|.||.+...+ ..+++|.+... ..+.+|+++|+.++||||+++++++......+++||++. ++|.+++.
T Consensus 103 G~~g~Vy~~~~~~~~~~~~v~vK~~~~~----~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~e~~~-~~l~~~l~ 177 (392)
T PHA03207 103 GSEGEVFVCTKHGDEQRKKVIVKAVTGG----KTPGREIDILKTISHRAIINLIHAYRWKSTVCMVMPKYK-CDLFTYVD 177 (392)
T ss_pred CCCeEEEEEEEcCCccceeEEEEecccc----ccHHHHHHHHHhcCCCCccceeeeEeeCCEEEEEehhcC-CCHHHHHH
Confidence 8999999887633 34555554332 345689999999999999999999999999999999996 58988884
Q ss_pred cCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCC------CccccCccCC
Q 014478 78 HWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG------KSYSTNLAFT 151 (424)
Q Consensus 78 ~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~------~~~~gt~~y~ 151 (424)
....+++.+++.++.||+.||.|||+++ |+||||||+|||++.++.++|+|||+++..... ....||+.|+
T Consensus 178 --~~~~l~~~~~~~i~~ql~~aL~~LH~~g-ivHrDlkp~Nill~~~~~~~l~DfG~a~~~~~~~~~~~~~~~~gt~~y~ 254 (392)
T PHA03207 178 --RSGPLPLEQAITIQRRLLEALAYLHGRG-IIHRDVKTENIFLDEPENAVLGDFGAACKLDAHPDTPQCYGWSGTLETN 254 (392)
T ss_pred --hcCCCCHHHHHHHHHHHHHHHHHHHHCC-ccccCCCHHHEEEcCCCCEEEccCccccccCcccccccccccccccCcc
Confidence 3567999999999999999999999999 999999999999999999999999998765432 2346899999
Q ss_pred CccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHh--hhhhhH----------------------hhhcccCC
Q 014478 152 PPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIR--SKNFLL----------------------LMDSALEG 207 (424)
Q Consensus 152 aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~--~~~~~~----------------------~~~~~~~~ 207 (424)
|||++.+..++.++|||||||++|||++|+.||......... ...+.. ........
T Consensus 255 aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 334 (392)
T PHA03207 255 SPELLALDPYCAKTDIWSAGLVLFEMSVKNVTLFGKQVKSSSSQLRSIIRCMQVHPLEFPQNGSTNLCKHFKQYAIVLRP 334 (392)
T ss_pred CHhHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCCCCcHHHHHHHHHHhccCccccCCccchhHHHHHHhhcccccC
Confidence 999999888999999999999999999999888653110000 000000 00000000
Q ss_pred C--CC-----chhHHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 014478 208 H--FS-----NDEGTELVRLASRCLQSEARERPNAKSLVIS 241 (424)
Q Consensus 208 ~--~~-----~~~~~~l~~li~~cl~~dp~~Rps~~~~~~~ 241 (424)
. .+ ...+.++.++|.+||..||++|||+.+++.+
T Consensus 335 ~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~Rpsa~e~l~~ 375 (392)
T PHA03207 335 PYTIPPVIRKYGMHMDVEYLIAKMLTFDQEFRPSAQDILSL 375 (392)
T ss_pred CccccchhhccCcchhHHHHHHHHhccChhhCCCHHHHhhC
Confidence 0 11 1235678999999999999999999999976
|
|
| >cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-37 Score=288.94 Aligned_cols=234 Identities=16% Similarity=0.199 Sum_probs=187.7
Q ss_pred CCCcccceeee--ecceecccccCCCc-hhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHhHhcc
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESSD-LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFH 78 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~ 78 (424)
|++|.||.+.+ .+..++.+++.... ...+.+.+|+.+++.++||||+++++.+..+...++||||+++++|..++..
T Consensus 23 g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~ 102 (292)
T cd06644 23 GAFGKVYKAKNKETGALAAAKVIETKSEEELEDYMVEIEILATCNHPYIVKLLGAFYWDGKLWIMIEFCPGGAVDAIMLE 102 (292)
T ss_pred CCCeEEEEEEECCCCceEEEEEeccCCHHHHHHHHHHHHHHHhCCCCcEeeeEEEEEeCCeEEEEEecCCCCcHHHHHHh
Confidence 89999999987 35666666665433 3467788999999999999999999999999999999999999999888754
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCC----CccccCccCCCcc
Q 014478 79 WETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG----KSYSTNLAFTPPE 154 (424)
Q Consensus 79 ~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~----~~~~gt~~y~aPE 154 (424)
....+++..+..++.|++.+|.|||+.+ ++||||||+||+++.++.++|+|||++...... ....++..|+|||
T Consensus 103 -~~~~l~~~~~~~~~~ql~~~l~~lH~~~-i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE 180 (292)
T cd06644 103 -LDRGLTEPQIQVICRQMLEALQYLHSMK-IIHRDLKAGNVLLTLDGDIKLADFGVSAKNVKTLQRRDSFIGTPYWMAPE 180 (292)
T ss_pred -hcCCCCHHHHHHHHHHHHHHHHHHhcCC-eeecCCCcceEEEcCCCCEEEccCccceeccccccccceecCCccccCce
Confidence 2456899999999999999999999999 999999999999999999999999988754322 3345788999999
Q ss_pred ccc-----cCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhc-ccCCCCCchhHHHHHHHHHHhcccC
Q 014478 155 YMR-----TGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDS-ALEGHFSNDEGTELVRLASRCLQSE 228 (424)
Q Consensus 155 ~~~-----~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~li~~cl~~d 228 (424)
++. ...++.++|||||||++|+|++|..|+...... ......... ......+..++.++.+++.+||..|
T Consensus 181 ~~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~ 256 (292)
T cd06644 181 VVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPM----RVLLKIAKSEPPTLSQPSKWSMEFRDFLKTALDKH 256 (292)
T ss_pred eeccccccCCCCCchhhhHhHHHHHHHHhcCCCCCccccHH----HHHHHHhcCCCccCCCCcccCHHHHHHHHHHhcCC
Confidence 985 334688999999999999999999776543111 111111111 1111234456778999999999999
Q ss_pred cCCCCCHHHHHHH
Q 014478 229 ARERPNAKSLVIS 241 (424)
Q Consensus 229 p~~Rps~~~~~~~ 241 (424)
|++||++.+++++
T Consensus 257 p~~Rp~~~~il~~ 269 (292)
T cd06644 257 PETRPSAAQLLEH 269 (292)
T ss_pred cccCcCHHHHhcC
Confidence 9999999999865
|
Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types. |
| >cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-37 Score=283.76 Aligned_cols=234 Identities=15% Similarity=0.201 Sum_probs=188.9
Q ss_pred CCCcccceeeee--cceecccccCCCc-hhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHhHhcc
Q 014478 2 GGRCSKFSICWF--HCHLKSSVLESSD-LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFH 78 (424)
Q Consensus 2 G~~g~v~~~~~~--~~~v~~~~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~ 78 (424)
|++|.||.+.+. +..+++|++.... ...+.+.+|++++++++||||+++++++..++..+++|||+++++|.+++..
T Consensus 14 g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~l~~e~~~~~~l~~~~~~ 93 (262)
T cd06613 14 GTYGDVYKARDIATGELVAIKVIKLEPGDDFEIIQQEISMLKECRHPNIVAYFGSYLRRDKLWIVMEYCGGGSLQDIYQV 93 (262)
T ss_pred CCceEEEEeEecCCCCEEEEEEEEcCchhhHHHHHHHHHHHHhCCCCChhceEEEEEeCCEEEEEEeCCCCCcHHHHHHh
Confidence 789999999873 4556666665433 2457888999999999999999999999999999999999999999998865
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCC----CccccCccCCCcc
Q 014478 79 WETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG----KSYSTNLAFTPPE 154 (424)
Q Consensus 79 ~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~----~~~~gt~~y~aPE 154 (424)
....+++.++..++.|++.||.|||+.+ ++|+||+|+||+++.++.++|+|||++...... ....++..|+|||
T Consensus 94 -~~~~l~~~~~~~~~~ql~~~l~~lh~~~-i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~y~~Pe 171 (262)
T cd06613 94 -TRGPLSELQIAYVCRETLKGLAYLHETG-KIHRDIKGANILLTEDGDVKLADFGVSAQLTATIAKRKSFIGTPYWMAPE 171 (262)
T ss_pred -hccCCCHHHHHHHHHHHHHHHHHHHhCC-ceecCCChhhEEECCCCCEEECccccchhhhhhhhccccccCCccccCch
Confidence 2367999999999999999999999999 999999999999999999999999998765432 2346788999999
Q ss_pred ccccC---CCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhc---ccCCCCCchhHHHHHHHHHHhcccC
Q 014478 155 YMRTG---RVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDS---ALEGHFSNDEGTELVRLASRCLQSE 228 (424)
Q Consensus 155 ~~~~~---~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~l~~li~~cl~~d 228 (424)
.+.+. .++.++|+||||+++|+|++|+.|+...... ......... ......+...+.++.+++.+||..|
T Consensus 172 ~~~~~~~~~~~~~~Di~slG~~l~~~~tg~~p~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~ 247 (262)
T cd06613 172 VAAVERKGGYDGKCDIWALGITAIELAELQPPMFDLHPM----RALFLISKSNFPPPKLKDKEKWSPVFHDFIKKCLTKD 247 (262)
T ss_pred hhcccccCCcCchhhhHHHHHHHHHHHhCCCCCCCCCHH----HHHHHHHhccCCCccccchhhhhHHHHHHHHHHcCCC
Confidence 99866 7889999999999999999999887643111 111111111 0111123346788999999999999
Q ss_pred cCCCCCHHHHHHH
Q 014478 229 ARERPNAKSLVIS 241 (424)
Q Consensus 229 p~~Rps~~~~~~~ 241 (424)
|.+|||+.+++.+
T Consensus 248 p~~Rpt~~~il~~ 260 (262)
T cd06613 248 PKKRPTATKLLQH 260 (262)
T ss_pred hhhCCCHHHHhcC
Confidence 9999999999753
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ |
| >cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.2e-38 Score=286.04 Aligned_cols=233 Identities=15% Similarity=0.247 Sum_probs=189.1
Q ss_pred CCCcccceeee-ecceecccccCCCc-------hhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHH
Q 014478 2 GGRCSKFSICW-FHCHLKSSVLESSD-------LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLA 73 (424)
Q Consensus 2 G~~g~v~~~~~-~~~~v~~~~~~~~~-------~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~ 73 (424)
|++|.||.+.. .+..+++|.+.... .....+.+|++++++++|+||++++++|...+..+++|||+++++|.
T Consensus 11 g~~~~v~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~ 90 (265)
T cd06631 11 GAYGTVYCGLTNQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQYLGTCLDDNTISIFMEFVPGGSIS 90 (265)
T ss_pred cCCeEEEEEEEcCCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCEeeEeeEeecCCeEEEEEecCCCCcHH
Confidence 88999999876 55566777664322 12356888999999999999999999999999999999999999999
Q ss_pred hHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCC----------CCc
Q 014478 74 KHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRD----------GKS 143 (424)
Q Consensus 74 ~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~----------~~~ 143 (424)
+++.+ ..++++..+..++.|++.||.|||+.+ ++|+||+|+||+++.++.++|+|||++..... ...
T Consensus 91 ~~l~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~-i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~ 167 (265)
T cd06631 91 SILNR--FGPLPEPVFCKYTKQILDGVAYLHNNC-VVHRDIKGNNVMLMPNGIIKLIDFGCARRLAWVGLHGTHSNMLKS 167 (265)
T ss_pred HHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCC-cccCCcCHHhEEECCCCeEEeccchhhHhhhhccccccccccccc
Confidence 99964 356899999999999999999999999 99999999999999999999999998875421 123
Q ss_pred cccCccCCCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhc-ccCCCCCchhHHHHHHHHH
Q 014478 144 YSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDS-ALEGHFSNDEGTELVRLAS 222 (424)
Q Consensus 144 ~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~li~ 222 (424)
..++..|+|||++.+..++.++||||||+++|+|++|..||.... .... ....... ......+..++.++.++|.
T Consensus 168 ~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~--~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~i~ 243 (265)
T cd06631 168 MHGTPYWMAPEVINESGYGRKSDIWSIGCTVFEMATGKPPLASMD--RLAA--MFYIGAHRGLMPRLPDSFSAAAIDFVT 243 (265)
T ss_pred cCCCccccChhhhcCCCCcchhhHHHHHHHHHHHHhCCCccccCC--hHHH--HHHhhhccCCCCCCCCCCCHHHHHHHH
Confidence 457889999999998889999999999999999999998876431 1111 1111111 1223345567889999999
Q ss_pred HhcccCcCCCCCHHHHHHH
Q 014478 223 RCLQSEARERPNAKSLVIS 241 (424)
Q Consensus 223 ~cl~~dp~~Rps~~~~~~~ 241 (424)
+||..+|++||++.+++.+
T Consensus 244 ~~l~~~p~~Rp~~~~~l~~ 262 (265)
T cd06631 244 SCLTRDQHERPSALQLLRH 262 (265)
T ss_pred HHhcCCcccCCCHHHHhcC
Confidence 9999999999999999753
|
Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. |
| >cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.7e-38 Score=289.85 Aligned_cols=238 Identities=16% Similarity=0.241 Sum_probs=191.0
Q ss_pred CCCcccceeee--ecceecccccCC--CchhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHhHhc
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLES--SDLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLF 77 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~ 77 (424)
|++|.||.+.+ .+..+++|.+.. .......+.+|++++++++||||+++++.+..++..++||||+++++|..++.
T Consensus 12 g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~ 91 (286)
T cd06622 12 GNYGSVYKVLHRPTGVTMAMKEIRLELDESKFNQIIMELDILHKAVSPYIVDFYGAFFIEGAVYMCMEYMDAGSLDKLYA 91 (286)
T ss_pred cCCeEEEEEEEcCCCcEEEEEEeecccCHHHHHHHHHHHHHHHhcCCCcHHhhhhheecCCeEEEEEeecCCCCHHHHHH
Confidence 88999999988 466777776643 23335678899999999999999999999999999999999999999999885
Q ss_pred cCC-CCCCCHHHHHHHHHHHHHHHHHHHhC-CCcccccCCCCCeeecCCCCeEEccccccccCCCC--CccccCccCCCc
Q 014478 78 HWE-TQPMKWAMRLRVALYLAQALEYCSSK-GRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG--KSYSTNLAFTPP 153 (424)
Q Consensus 78 ~~~-~~~l~~~~~~~i~~qi~~~L~~lH~~-~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~--~~~~gt~~y~aP 153 (424)
... ...+++..+..++.|++.||.|||+. + ++||||||+||+++.++.++|+|||++...... ....++..|+||
T Consensus 92 ~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~-i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~y~aP 170 (286)
T cd06622 92 GGVATEGIPEDVLRRITYAVVKGLKFLKEEHN-IIHRDVKPTNVLVNGNGQVKLCDFGVSGNLVASLAKTNIGCQSYMAP 170 (286)
T ss_pred hccccCCCCHHHHHHHHHHHHHHHHHHHhcCC-EeeCCCCHHHEEECCCCCEEEeecCCcccccCCccccCCCccCccCc
Confidence 421 23789999999999999999999974 7 999999999999999999999999998765332 334578899999
Q ss_pred cccccCC------CCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHHHHHHHHHhccc
Q 014478 154 EYMRTGR------VTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQS 227 (424)
Q Consensus 154 E~~~~~~------~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~ 227 (424)
|.+.+.. ++.++|+|||||++|+|++|+.||......... ....... .......+..++.++.++|.+||..
T Consensus 171 E~~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~-~~~~~~~-~~~~~~~~~~~~~~~~~li~~~l~~ 248 (286)
T cd06622 171 ERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYPPETYANIF-AQLSAIV-DGDPPTLPSGYSDDAQDFVAKCLNK 248 (286)
T ss_pred chhcCCCCCccCCCCcccchHhHHHHHHHHHhCCCCCCCcchhhHH-HHHHHHh-hcCCCCCCcccCHHHHHHHHHHccc
Confidence 9986543 478999999999999999999887653211111 1111111 2223345556788999999999999
Q ss_pred CcCCCCCHHHHHHHH
Q 014478 228 EARERPNAKSLVISL 242 (424)
Q Consensus 228 dp~~Rps~~~~~~~l 242 (424)
+|++||++.+++.+-
T Consensus 249 ~p~~Rp~~~~l~~~~ 263 (286)
T cd06622 249 IPNRRPTYAQLLEHP 263 (286)
T ss_pred CcccCCCHHHHhcCh
Confidence 999999999998753
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include |
| >cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-37 Score=287.96 Aligned_cols=234 Identities=15% Similarity=0.212 Sum_probs=189.3
Q ss_pred CCCcccceeeee--cceecccccCCCc-hhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHhHhcc
Q 014478 2 GGRCSKFSICWF--HCHLKSSVLESSD-LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFH 78 (424)
Q Consensus 2 G~~g~v~~~~~~--~~~v~~~~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~ 78 (424)
|++|.||.+.+. +..+++|+..... ...+.|.+|++++++++||||+++++++..+...++||||+++++|.+++.+
T Consensus 16 g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~ 95 (280)
T cd06611 16 GAFGKVYKAQHKETGLFAAAKIIQIESEEELEDFMVEIDILSECKHPNIVGLYEAYFYENKLWILIEFCDGGALDSIMLE 95 (280)
T ss_pred CCCceEEEEEEcCCCcEEEEEEEeeCCHHHHHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEeeccCCCcHHHHHHH
Confidence 889999999883 5667777665433 3456788999999999999999999999999999999999999999999865
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCC----CccccCccCCCcc
Q 014478 79 WETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG----KSYSTNLAFTPPE 154 (424)
Q Consensus 79 ~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~----~~~~gt~~y~aPE 154 (424)
....+++.++..++.|++.||.|||+++ ++|+||||+||+++.++.++|+|||++...... ....++..|+|||
T Consensus 96 -~~~~l~~~~~~~~~~ql~~~l~~lh~~~-i~h~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~y~~PE 173 (280)
T cd06611 96 -LERGLTEPQIRYVCRQMLEALNFLHSHK-VIHRDLKAGNILLTLDGDVKLADFGVSAKNKSTLQKRDTFIGTPYWMAPE 173 (280)
T ss_pred -hcCCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCChhhEEECCCCCEEEccCccchhhcccccccceeecchhhcCHH
Confidence 2457999999999999999999999999 999999999999999999999999987654322 2345788999999
Q ss_pred ccc-----cCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhc-ccCCCCCchhHHHHHHHHHHhcccC
Q 014478 155 YMR-----TGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDS-ALEGHFSNDEGTELVRLASRCLQSE 228 (424)
Q Consensus 155 ~~~-----~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~li~~cl~~d 228 (424)
.+. ...++.++|+||||+++|+|++|+.||...... ......... ......+..++.++.+++.+||..|
T Consensus 174 ~~~~~~~~~~~~~~~sDi~slG~il~~l~~g~~p~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~ 249 (280)
T cd06611 174 VVACETFKDNPYDYKADIWSLGITLIELAQMEPPHHELNPM----RVLLKILKSEPPTLDQPSKWSSSFNDFLKSCLVKD 249 (280)
T ss_pred HHhhcccCCCCCCccccHHHHHHHHHHHHhCCCCcccCCHH----HHHHHHhcCCCCCcCCcccCCHHHHHHHHHHhccC
Confidence 875 234778999999999999999999877543111 111111111 1111234456789999999999999
Q ss_pred cCCCCCHHHHHHH
Q 014478 229 ARERPNAKSLVIS 241 (424)
Q Consensus 229 p~~Rps~~~~~~~ 241 (424)
|.+|||+.+++++
T Consensus 250 p~~Rps~~~il~~ 262 (280)
T cd06611 250 PDDRPTAAELLKH 262 (280)
T ss_pred hhhCcCHHHHhcC
Confidence 9999999999876
|
Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti |
| >PTZ00266 NIMA-related protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-37 Score=318.41 Aligned_cols=234 Identities=17% Similarity=0.211 Sum_probs=182.3
Q ss_pred CCCcccceeee--ecceecccccCC---CchhhhHHHHHHHHHhcCCCcCcceeEEEEEe--CCeeeEEEecCCCCCHHh
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLES---SDLGETLNLEEAKAVGNLRSERLANLIGCCYE--ADERLLVAEFMPNETLAK 74 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~---~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~--~~~~~lv~e~~~~gsL~~ 74 (424)
|+||.||.+.+ .+..+++|++.. .......|..|+.+|..|+||||++++++|.. ...+||||||+++|+|.+
T Consensus 24 GgFGtVYLAkdk~tg~~vAlKvIk~~~l~e~~~~~~~~EI~IL~~L~HPNIVrl~d~f~de~~~~lyIVMEY~~gGSL~~ 103 (1021)
T PTZ00266 24 GRFGEVFLVKHKRTQEFFCWKAISYRGLKEREKSQLVIEVNVMRELKHKNIVRYIDRFLNKANQKLYILMEFCDAGDLSR 103 (1021)
T ss_pred CCCeEEEEEEECCCCeEEEEEEEeccccCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEecCCCEEEEEEeCCCCCcHHH
Confidence 89999999987 344556666543 22345678899999999999999999998865 356889999999999999
Q ss_pred HhccC--CCCCCCHHHHHHHHHHHHHHHHHHHh-------CCCcccccCCCCCeeecC-----------------CCCeE
Q 014478 75 HLFHW--ETQPMKWAMRLRVALYLAQALEYCSS-------KGRALYHDLNAYRILFDK-----------------DGNPR 128 (424)
Q Consensus 75 ~l~~~--~~~~l~~~~~~~i~~qi~~~L~~lH~-------~~~ivH~dikp~Nill~~-----------------~~~~k 128 (424)
+|... ....+++..++.|+.||+.||.|||+ ++ ||||||||+||||+. .+.+|
T Consensus 104 lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~-IVHRDLKPeNILL~s~~~~lg~i~~~~~n~ng~~iVK 182 (1021)
T PTZ00266 104 NIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGER-VLHRDLKPQNIFLSTGIRHIGKITAQANNLNGRPIAK 182 (1021)
T ss_pred HHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCC-ceeccCcHHHeEeecCccccccccccccccCCCCceE
Confidence 98542 23579999999999999999999998 45 999999999999954 23489
Q ss_pred EccccccccCCCC---CccccCccCCCcccccc--CCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhc
Q 014478 129 LSSFGLMKNSRDG---KSYSTNLAFTPPEYMRT--GRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDS 203 (424)
Q Consensus 129 l~Dfg~~~~~~~~---~~~~gt~~y~aPE~~~~--~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~ 203 (424)
|+|||++...... ....||+.|+|||++.+ ..++.++|||||||++|+|++|..||..... . ..+...+..
T Consensus 183 LsDFGlAr~l~~~s~~~s~vGTp~YmAPEvL~ge~~~~s~KSDVWSLG~ILYELLTGk~PF~~~~~--~--~qli~~lk~ 258 (1021)
T PTZ00266 183 IGDFGLSKNIGIESMAHSCVGTPYYWSPELLLHETKSYDDKSDMWALGCIIYELCSGKTPFHKANN--F--SQLISELKR 258 (1021)
T ss_pred EccCCccccccccccccccCCCccccCHHHHhccCCCCCchhHHHHHHHHHHHHHHCCCCCCcCCc--H--HHHHHHHhc
Confidence 9999998865432 34468999999999864 3588999999999999999999988764311 1 111111111
Q ss_pred ccCCCCCchhHHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 014478 204 ALEGHFSNDEGTELVRLASRCLQSEARERPNAKSLVIS 241 (424)
Q Consensus 204 ~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~~~~~ 241 (424)
.. .......+.++.+||.+||..+|.+||++.+++.+
T Consensus 259 ~p-~lpi~~~S~eL~dLI~~~L~~dPeeRPSa~QlL~h 295 (1021)
T PTZ00266 259 GP-DLPIKGKSKELNILIKNLLNLSAKERPSALQCLGY 295 (1021)
T ss_pred CC-CCCcCCCCHHHHHHHHHHhcCChhHCcCHHHHhcc
Confidence 11 11123457889999999999999999999999864
|
|
| >cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta | Back alignment and domain information |
|---|
Probab=100.00 E-value=7e-38 Score=295.98 Aligned_cols=234 Identities=16% Similarity=0.165 Sum_probs=185.9
Q ss_pred CCCcccceeee--ecceecccccCCCc----hhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHhH
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESSD----LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKH 75 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~~----~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~ 75 (424)
|+||.||.+.+ .+..+++|++.... .....+.+|..++..++|+||+++++++..++..++||||++||+|.++
T Consensus 12 G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~l~~~~~~~~~~~lv~Ey~~gg~L~~~ 91 (331)
T cd05624 12 GAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNGDCQWITTLHYAFQDENYLYLVMDYYVGGDLLTL 91 (331)
T ss_pred CCCeEEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEEeCCCCCcHHHH
Confidence 89999999987 44567777765322 2345678899999999999999999999999999999999999999999
Q ss_pred hccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCC-----CccccCccC
Q 014478 76 LFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG-----KSYSTNLAF 150 (424)
Q Consensus 76 l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~-----~~~~gt~~y 150 (424)
+.. ....+++..+..++.|++.||.|||+++ |+||||||+|||++.++.+||+|||+++..... ....||+.|
T Consensus 92 l~~-~~~~l~~~~~~~~~~qi~~~L~~lH~~~-iiHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~~gt~~y 169 (331)
T cd05624 92 LSK-FEDRLPEDMARFYIAEMVLAIHSIHQLH-YVHRDIKPDNVLLDMNGHIRLADFGSCLKMNQDGTVQSSVAVGTPDY 169 (331)
T ss_pred HHH-hcCCCCHHHHHHHHHHHHHHHHHHHHCC-eeeccCchHHEEEcCCCCEEEEeccceeeccCCCceeeccccCCccc
Confidence 965 2357899999999999999999999999 999999999999999999999999998765432 224689999
Q ss_pred CCcccccc-----CCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhcccCCCCC---chhHHHHHHHHH
Q 014478 151 TPPEYMRT-----GRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFS---NDEGTELVRLAS 222 (424)
Q Consensus 151 ~aPE~~~~-----~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~l~~li~ 222 (424)
+|||++.+ +.++.++|||||||++|+|++|+.||....... ....+.........+ ..++.++.+++.
T Consensus 170 ~aPE~~~~~~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~----~~~~i~~~~~~~~~p~~~~~~~~~~~~li~ 245 (331)
T cd05624 170 ISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVE----TYGKIMNHEERFQFPSHITDVSEEAKDLIQ 245 (331)
T ss_pred CCHHHHhccccCCCCCCCcccEEeeehhhhhhhhCCCCccCCCHHH----HHHHHHcCCCcccCCCccccCCHHHHHHHH
Confidence 99999875 457889999999999999999998886542211 111111111111122 345789999999
Q ss_pred HhcccCcCC--CCCHHHHHHH
Q 014478 223 RCLQSEARE--RPNAKSLVIS 241 (424)
Q Consensus 223 ~cl~~dp~~--Rps~~~~~~~ 241 (424)
+||..++.+ |+++++++++
T Consensus 246 ~ll~~~~~~~~~~~~~~~~~h 266 (331)
T cd05624 246 RLICSRERRLGQNGIEDFKKH 266 (331)
T ss_pred HHccCchhhcCCCCHHHHhcC
Confidence 999876654 4688888876
|
Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues. |
| >cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-37 Score=283.30 Aligned_cols=234 Identities=18% Similarity=0.173 Sum_probs=190.3
Q ss_pred CCCcccceeee--ecceecccccCCC---chhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHhHh
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESS---DLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHL 76 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~---~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~l 76 (424)
|++|.||.+.+ .+..+++|.+... ......+.+|++++++++||||+++++.+..++..++||||+++++|.+++
T Consensus 11 g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~ 90 (256)
T cd08220 11 GAFGIVHLCRRKADQKLVIIKQIPVEQMTKDERLAAQNECQVLKLLSHPNIIEYYENFLEDKALMIVMEYAPGGTLAEYI 90 (256)
T ss_pred cCceEEEEEEEcCCCcEEEEEEEeccccccHHHHHHHHHHHHHhhCCCCchhheeeeEecCCEEEEEEecCCCCCHHHHH
Confidence 78899998877 4555666665433 234567889999999999999999999999989999999999999999999
Q ss_pred ccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCC-CeEEccccccccCCCC---CccccCccCCC
Q 014478 77 FHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDG-NPRLSSFGLMKNSRDG---KSYSTNLAFTP 152 (424)
Q Consensus 77 ~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~-~~kl~Dfg~~~~~~~~---~~~~gt~~y~a 152 (424)
....+..+++..+..++.|++.+|.|||+++ ++||||||+||+++.++ .++|+|||++...... ....++..|+|
T Consensus 91 ~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~-i~h~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~y~a 169 (256)
T cd08220 91 QKRCNSLLDEDTILHFFVQILLALHHVHTKL-ILHRDLKTQNILLDKHKMVVKIGDFGISKILSSKSKAYTVVGTPCYIS 169 (256)
T ss_pred HHhcccCCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCCHHHEEEcCCCCEEEEccCCCceecCCCccccccccCCcccC
Confidence 7644556899999999999999999999999 99999999999997554 5799999998866533 23457889999
Q ss_pred ccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHHHHHHHHHhcccCcCCC
Q 014478 153 PEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARER 232 (424)
Q Consensus 153 PE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~R 232 (424)
||.+.+...+.++||||||+++|+|++|+.|+........ ............+..+++++.+++.+||..||++|
T Consensus 170 PE~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~R 244 (256)
T cd08220 170 PELCEGKPYNQKSDIWALGCVLYELASLKRAFEAANLPAL-----VLKIMSGTFAPISDRYSPDLRQLILSMLNLDPSKR 244 (256)
T ss_pred chhccCCCCCcccchHHHHHHHHHHHhCCCCcccCchHHH-----HHHHHhcCCCCCCCCcCHHHHHHHHHHccCChhhC
Confidence 9999988889999999999999999999988765321111 11111122223445578899999999999999999
Q ss_pred CCHHHHHHH
Q 014478 233 PNAKSLVIS 241 (424)
Q Consensus 233 ps~~~~~~~ 241 (424)
||+.+++.+
T Consensus 245 pt~~~ll~~ 253 (256)
T cd08220 245 PQLSQIMAQ 253 (256)
T ss_pred CCHHHHhhC
Confidence 999999864
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with |
| >cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.2e-38 Score=295.71 Aligned_cols=234 Identities=16% Similarity=0.159 Sum_probs=185.0
Q ss_pred CCCcccceeeee--cceecccccCCC----chhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHhH
Q 014478 2 GGRCSKFSICWF--HCHLKSSVLESS----DLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKH 75 (424)
Q Consensus 2 G~~g~v~~~~~~--~~~v~~~~~~~~----~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~ 75 (424)
|+||.||.+.+. +..+++|++... ......+.+|+.++..++|+||+++++.+.+.+..++||||+++|+|.++
T Consensus 12 G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ey~~~g~L~~~ 91 (332)
T cd05623 12 GAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDNQWITTLHYAFQDENNLYLVMDYYVGGDLLTL 91 (332)
T ss_pred CCCeEEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCEEEEEEeccCCCcHHHH
Confidence 899999999874 445666666432 12244578899999999999999999999999999999999999999999
Q ss_pred hccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCC-----CccccCccC
Q 014478 76 LFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG-----KSYSTNLAF 150 (424)
Q Consensus 76 l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~-----~~~~gt~~y 150 (424)
+.+ ....+++..+..++.|++.||.|||+++ |+||||||+|||++.++.+||+|||++...... ....||+.|
T Consensus 92 l~~-~~~~l~~~~~~~~~~qi~~al~~lH~~~-iiHrDlkp~Nili~~~~~~kL~DfG~a~~~~~~~~~~~~~~~gt~~y 169 (332)
T cd05623 92 LSK-FEDRLPEDMARFYLAEMVIAIDSVHQLH-YVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQSSVAVGTPDY 169 (332)
T ss_pred HHH-hcCCCCHHHHHHHHHHHHHHHHHHHHCC-eEecCCCHHHEEECCCCCEEEeecchheecccCCcceecccccCccc
Confidence 965 2457899999999999999999999999 999999999999999999999999998754322 224689999
Q ss_pred CCccccc-----cCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhcccCCCC---CchhHHHHHHHHH
Q 014478 151 TPPEYMR-----TGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHF---SNDEGTELVRLAS 222 (424)
Q Consensus 151 ~aPE~~~-----~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~l~~li~ 222 (424)
+|||++. ...++.++|||||||++|||++|+.||........ ...+......... ...++.++.+++.
T Consensus 170 ~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell~g~~Pf~~~~~~~~----~~~i~~~~~~~~~p~~~~~~s~~~~~li~ 245 (332)
T cd05623 170 ISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETPFYAESLVET----YGKIMNHKERFQFPAQVTDVSEDAKDLIR 245 (332)
T ss_pred cCHHHHhccccCCCCCCCcCCEEeeHHHHHHHhcCCCCCCCCCHHHH----HHHHhCCCccccCCCccccCCHHHHHHHH
Confidence 9999986 24578899999999999999999988875422111 1111111111112 2356889999999
Q ss_pred HhcccCcCC--CCCHHHHHHH
Q 014478 223 RCLQSEARE--RPNAKSLVIS 241 (424)
Q Consensus 223 ~cl~~dp~~--Rps~~~~~~~ 241 (424)
+||..++.. |+++++++++
T Consensus 246 ~ll~~~~~r~~r~~~~~~~~h 266 (332)
T cd05623 246 RLICSREHRLGQNGIEDFKQH 266 (332)
T ss_pred HHccChhhhcCCCCHHHHhCC
Confidence 999665544 6899999887
|
Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw |
| >cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-37 Score=288.24 Aligned_cols=237 Identities=18% Similarity=0.279 Sum_probs=190.7
Q ss_pred CCCcccceeeee--cceecccccCCC--chhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHhHhc
Q 014478 2 GGRCSKFSICWF--HCHLKSSVLESS--DLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLF 77 (424)
Q Consensus 2 G~~g~v~~~~~~--~~~v~~~~~~~~--~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~ 77 (424)
|++|.||.+.+. +..+++|++... ......+.+|+++++.++||||+++++++......++||||+++++|.+++.
T Consensus 16 g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~ 95 (284)
T cd06620 16 GNGGSVSKVKHIPTGTVMAKKVVHIGAKSSVRKQILRELQIMHECRSPYIVSFYGAFLNENNICMCMEFMDCGSLDRIYK 95 (284)
T ss_pred CCCeEEEEEEEcCCCcEEEEEEEEecCcchHHHHHHHHHHHHHHcCCCCcceEeeeEecCCEEEEEEecCCCCCHHHHHH
Confidence 889999999885 666777665432 3346788999999999999999999999999999999999999999999886
Q ss_pred cCCCCCCCHHHHHHHHHHHHHHHHHHHh-CCCcccccCCCCCeeecCCCCeEEccccccccCCCC--CccccCccCCCcc
Q 014478 78 HWETQPMKWAMRLRVALYLAQALEYCSS-KGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG--KSYSTNLAFTPPE 154 (424)
Q Consensus 78 ~~~~~~l~~~~~~~i~~qi~~~L~~lH~-~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~--~~~~gt~~y~aPE 154 (424)
. .+++++..+..++.+++.+|.|||+ .+ ++||||||+||+++.++.++|+|||++...... ....|+..|+|||
T Consensus 96 ~--~~~~~~~~~~~~~~~i~~~l~~LH~~~~-i~H~dl~p~nil~~~~~~~~l~d~gl~~~~~~~~~~~~~~~~~~~aPE 172 (284)
T cd06620 96 K--GGPIPVEILGKIAVAVVEGLTYLYNVHR-IMHRDIKPSNILVNSRGQIKLCDFGVSGELINSIADTFVGTSTYMSPE 172 (284)
T ss_pred h--ccCCCHHHHHHHHHHHHHHHHHHHHhcC-eeccCCCHHHEEECCCCcEEEccCCcccchhhhccCccccCcccCCHH
Confidence 4 4578999999999999999999997 47 999999999999999999999999998754322 2346889999999
Q ss_pred ccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHH---Hhhh----hhhHhhhcccCCCCC-chhHHHHHHHHHHhcc
Q 014478 155 YMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDL---IRSK----NFLLLMDSALEGHFS-NDEGTELVRLASRCLQ 226 (424)
Q Consensus 155 ~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~---~~~~----~~~~~~~~~~~~~~~-~~~~~~l~~li~~cl~ 226 (424)
++.+..++.++|||||||++|+|++|..||....... .... ......... ....+ ..++.++.+++.+||.
T Consensus 173 ~~~~~~~~~~~Di~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~li~~~l~ 251 (284)
T cd06620 173 RIQGGKYTVKSDVWSLGISIIELALGKFPFAFSNIDDDGQDDPMGILDLLQQIVQEP-PPRLPSSDFPEDLRDFVDACLL 251 (284)
T ss_pred HHccCCCCccchHHHHHHHHHHHHhCCCCCcccchhhhhhhhhhHHHHHHHHHhhcc-CCCCCchhcCHHHHHHHHHHhc
Confidence 9988889999999999999999999998876532210 0000 111111111 11222 2367789999999999
Q ss_pred cCcCCCCCHHHHHHHH
Q 014478 227 SEARERPNAKSLVISL 242 (424)
Q Consensus 227 ~dp~~Rps~~~~~~~l 242 (424)
.||++|||+.+++++.
T Consensus 252 ~dp~~Rpt~~e~~~~~ 267 (284)
T cd06620 252 KDPTERPTPQQLCAMP 267 (284)
T ss_pred CCcccCcCHHHHhcCc
Confidence 9999999999999764
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include |
| >cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.6e-38 Score=287.87 Aligned_cols=237 Identities=19% Similarity=0.231 Sum_probs=189.3
Q ss_pred CCCcccceeee--ecceecccccCCCc----hhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHhH
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESSD----LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKH 75 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~~----~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~ 75 (424)
|++|.||.+.+ .+..+++|++.... .....+..|+++++.++||||+++++++...+..++||||+++++|.++
T Consensus 4 g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~ 83 (277)
T cd05577 4 GGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVSLAYAFETKDDLCLVMTLMNGGDLKYH 83 (277)
T ss_pred CCceeEEEEEEcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCCCCCEeeeeeEEecCCeEEEEEecCCCCcHHHH
Confidence 89999999876 45667777664322 2345677899999999999999999999999999999999999999999
Q ss_pred hccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCC---CccccCccCCC
Q 014478 76 LFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG---KSYSTNLAFTP 152 (424)
Q Consensus 76 l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~---~~~~gt~~y~a 152 (424)
+.......+++.++..++.|++.||.|||+++ ++||||+|+||+++.++.++|+|||++...... ....++..|+|
T Consensus 84 l~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~-i~H~di~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~y~~ 162 (277)
T cd05577 84 IYNVGEPGFPEARAIFYAAQIICGLEHLHQRR-IVYRDLKPENVLLDDHGNVRISDLGLAVELKGGKKIKGRAGTPGYMA 162 (277)
T ss_pred HHHcCcCCCCHHHHHHHHHHHHHHHHHHHhCC-cccCCCCHHHEEECCCCCEEEccCcchhhhccCCccccccCCCCcCC
Confidence 87544457999999999999999999999999 999999999999999999999999998765432 23456789999
Q ss_pred ccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHHHHHHHHHhcccCcCCC
Q 014478 153 PEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARER 232 (424)
Q Consensus 153 PE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~R 232 (424)
||++.++.++.++||||||+++|+|++|+.||........ ......... ......+...++.+.++|.+||+.||.+|
T Consensus 163 PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~li~~~l~~~p~~R 240 (277)
T cd05577 163 PEVLQGEVYDFSVDWFALGCTLYEMIAGRSPFRQRKEKVE-KEELKRRTL-EMAVEYPDKFSPEAKDLCEALLQKDPEKR 240 (277)
T ss_pred HHHhcCCCCCchhhhHHHHHHHHHHhhCCCCCCCCccccc-HHHHHhccc-cccccCCccCCHHHHHHHHHHccCChhHc
Confidence 9999888899999999999999999999988765321100 011111111 11223445568899999999999999999
Q ss_pred C-----CHHHHHHH
Q 014478 233 P-----NAKSLVIS 241 (424)
Q Consensus 233 p-----s~~~~~~~ 241 (424)
| ++.+++.+
T Consensus 241 ~~~~~~~~~~ll~h 254 (277)
T cd05577 241 LGCRGGSADEVREH 254 (277)
T ss_pred cCCCcccHHHHHhC
Confidence 9 66666653
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of |
| >cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-37 Score=284.46 Aligned_cols=235 Identities=16% Similarity=0.185 Sum_probs=193.4
Q ss_pred CCCcccceeeee--cceecccccCCCc----hhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHhH
Q 014478 2 GGRCSKFSICWF--HCHLKSSVLESSD----LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKH 75 (424)
Q Consensus 2 G~~g~v~~~~~~--~~~v~~~~~~~~~----~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~ 75 (424)
|++|.||.+... +..+++|++.... ...+.+.+|+++++.++||||+++++.+.++...++||||+++++|.++
T Consensus 4 g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~ 83 (262)
T cd05572 4 GGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFIVKLYRTFKDKKYIYMLMEYCLGGELWTI 83 (262)
T ss_pred CCceEEEEEEECCCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhCCCCCEeeeeeeEEcCCccEEEEecCCCCcHHHH
Confidence 889999999985 6777777765432 3356788999999999999999999999999999999999999999999
Q ss_pred hccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCC---CccccCccCCC
Q 014478 76 LFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG---KSYSTNLAFTP 152 (424)
Q Consensus 76 l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~---~~~~gt~~y~a 152 (424)
+.+ ...++...+..++.|++.||.|||+++ ++|+||+|+||+++.++.++|+|||+++..... ....++..|++
T Consensus 84 l~~--~~~l~~~~~~~~~~~i~~~l~~lH~~~-~~h~dl~~~nilv~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~ 160 (262)
T cd05572 84 LRD--RGLFDEYTARFYIACVVLAFEYLHNRG-IIYRDLKPENLLLDSNGYVKLVDFGFAKKLKSGQKTWTFCGTPEYVA 160 (262)
T ss_pred Hhh--cCCCCHHHHHHHHHHHHHHHHHHhhCC-cccCCCCHHHEEEcCCCCEEEeeCCcccccCcccccccccCCcCccC
Confidence 964 356899999999999999999999999 999999999999999999999999998876543 23467889999
Q ss_pred ccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHHHHHHHHHhcccCcCCC
Q 014478 153 PEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARER 232 (424)
Q Consensus 153 PE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~R 232 (424)
||.+.+..++.++|+||||+++|+|++|..|+.....+. ................+...+.++.+++.+||..||++|
T Consensus 161 PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R 238 (262)
T cd05572 161 PEIILNKGYDFSVDYWSLGILLYELLTGRPPFGEDDEDP--MEIYNDILKGNGKLEFPNYIDKAAKDLIKQLLRRNPEER 238 (262)
T ss_pred hhHhcCCCCCChhhhhhhHHHHHHHHhCCCCcCCCCCCH--HHHHHHHhccCCCCCCCcccCHHHHHHHHHHccCChhhC
Confidence 999988889999999999999999999998876542111 111111221122334455567899999999999999999
Q ss_pred CC-----HHHHHHH
Q 014478 233 PN-----AKSLVIS 241 (424)
Q Consensus 233 ps-----~~~~~~~ 241 (424)
|+ +++++++
T Consensus 239 ~~~~~~~~~~l~~~ 252 (262)
T cd05572 239 LGNLKGGIKDIKKH 252 (262)
T ss_pred cCCcccCHHHHhcC
Confidence 99 7777753
|
Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi |
| >cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-37 Score=289.82 Aligned_cols=234 Identities=18% Similarity=0.199 Sum_probs=188.3
Q ss_pred CCCcccceeee--ecceecccccCCC----chhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHhH
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESS----DLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKH 75 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~----~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~ 75 (424)
|++|.||.+.+ .+..+++|++... ......+.+|+++++.++||||++++++|..++..++||||++| +|.++
T Consensus 26 g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~g-~l~~~ 104 (307)
T cd06607 26 GSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPNTIEYKGCYLREHTAWLVMEYCLG-SASDI 104 (307)
T ss_pred CCCeEEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCCCCCEEEEEEEEEeCCeEEEEHHhhCC-CHHHH
Confidence 78999999987 4666777766422 22345788999999999999999999999999999999999974 77777
Q ss_pred hccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCCCccccCccCCCccc
Q 014478 76 LFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLAFTPPEY 155 (424)
Q Consensus 76 l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~gt~~y~aPE~ 155 (424)
+.. ....+++.++..++.|++.||.|||+.+ ++||||+|+||+++.++.++|+|||++..........++..|+|||+
T Consensus 105 ~~~-~~~~l~~~~~~~~~~ql~~~L~~LH~~~-i~H~dl~p~nIl~~~~~~~kL~dfg~~~~~~~~~~~~~~~~y~aPE~ 182 (307)
T cd06607 105 LEV-HKKPLQEVEIAAICHGALQGLAYLHSHE-RIHRDIKAGNILLTEPGTVKLADFGSASLVSPANSFVGTPYWMAPEV 182 (307)
T ss_pred HHH-cccCCCHHHHHHHHHHHHHHHHHHHHCC-ceecCCCcccEEECCCCCEEEeecCcceecCCCCCccCCccccCcee
Confidence 643 2457899999999999999999999999 99999999999999999999999999987766666778899999998
Q ss_pred cc---cCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHHHHHHHHHhcccCcCCC
Q 014478 156 MR---TGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARER 232 (424)
Q Consensus 156 ~~---~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~R 232 (424)
+. .+.++.++||||||+++|||++|..|+........ .............+..++.++.+++.+||..||++|
T Consensus 183 ~~~~~~~~~~~~sDv~s~G~il~el~tg~~p~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R 258 (307)
T cd06607 183 ILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSA----LYHIAQNDSPTLSSNDWSDYFRNFVDSCLQKIPQDR 258 (307)
T ss_pred eeccCCCCCCcccchHHHHHHHHHHHcCCCCCCCccHHHH----HHHHhcCCCCCCCchhhCHHHHHHHHHHhcCChhhC
Confidence 74 35688899999999999999999977654311110 111111111112233467789999999999999999
Q ss_pred CCHHHHHHHH
Q 014478 233 PNAKSLVISL 242 (424)
Q Consensus 233 ps~~~~~~~l 242 (424)
|++.+++.+.
T Consensus 259 p~~~~il~~~ 268 (307)
T cd06607 259 PSSEELLKHR 268 (307)
T ss_pred cCHHHHhcCh
Confidence 9999998653
|
Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily |
| >cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.2e-38 Score=291.54 Aligned_cols=232 Identities=17% Similarity=0.248 Sum_probs=190.5
Q ss_pred CCCcccceeee--ecceecccccCCCc-hhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHhHhcc
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESSD-LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFH 78 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~ 78 (424)
|++|.||.+.. .+..+++|.+.... ...+.+.+|+.+++.++||||+++++++..++..++||||+++++|.+++.
T Consensus 30 g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~- 108 (297)
T cd06656 30 GASGTVYTAIDIATGQEVAIKQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVT- 108 (297)
T ss_pred CCCeEEEEEEECCCCCEEEEEEEecCccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCEEEEeecccCCCCHHHHHH-
Confidence 78999999986 56778887775433 335678899999999999999999999999999999999999999999985
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCC----CccccCccCCCcc
Q 014478 79 WETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG----KSYSTNLAFTPPE 154 (424)
Q Consensus 79 ~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~----~~~~gt~~y~aPE 154 (424)
...+++.++..++.|++.||.|||+.+ ++||||||+||+++.++.++|+|||++...... ....+++.|+|||
T Consensus 109 --~~~~~~~~~~~~~~~l~~~L~~LH~~~-i~H~dL~p~Nili~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE 185 (297)
T cd06656 109 --ETCMDEGQIAAVCRECLQALDFLHSNQ-VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPE 185 (297)
T ss_pred --hCCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCCHHHEEECCCCCEEECcCccceEccCCccCcCcccCCccccCHH
Confidence 356899999999999999999999999 999999999999999999999999998765432 2346788999999
Q ss_pred ccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhh-hcccCCCCCchhHHHHHHHHHHhcccCcCCCC
Q 014478 155 YMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLM-DSALEGHFSNDEGTELVRLASRCLQSEARERP 233 (424)
Q Consensus 155 ~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rp 233 (424)
.+.+..++.++|+|||||++|+|++|..||...... ....... ........+...+..+.+++.+||..||++||
T Consensus 186 ~~~~~~~~~~~Di~slGvil~~l~tg~~pf~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp 261 (297)
T cd06656 186 VVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPL----RALYLIATNGTPELQNPERLSAVFRDFLNRCLEMDVDRRG 261 (297)
T ss_pred HHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcc----hheeeeccCCCCCCCCccccCHHHHHHHHHHccCChhhCc
Confidence 999888999999999999999999999887543110 0011111 11111223445677899999999999999999
Q ss_pred CHHHHHHH
Q 014478 234 NAKSLVIS 241 (424)
Q Consensus 234 s~~~~~~~ 241 (424)
|+++++.+
T Consensus 262 s~~~il~~ 269 (297)
T cd06656 262 SAKELLQH 269 (297)
T ss_pred CHHHHhcC
Confidence 99999865
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding |
| >PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-38 Score=288.11 Aligned_cols=236 Identities=22% Similarity=0.359 Sum_probs=188.9
Q ss_pred CCCcccceeeeec--ceecccccCCCchhhh---HHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHhHh
Q 014478 2 GGRCSKFSICWFH--CHLKSSVLESSDLGET---LNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHL 76 (424)
Q Consensus 2 G~~g~v~~~~~~~--~~v~~~~~~~~~~~~~---~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~l 76 (424)
|++|.||++...+ ..+++|++........ ...+|+.++++++||||+++++++......++|||++++++|.+++
T Consensus 10 G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~v~~~~~~~~L~~~l 89 (260)
T PF00069_consen 10 GGFGTVYKAKNKKNGQKVAVKIIDKSEIEEEEREENIREIKILRRLRHPNIVQILDVFQDDNYLYIVMEYCPGGSLQDYL 89 (260)
T ss_dssp ESSEEEEEEEETTTTEEEEEEEEESTTHHHHHHHHHHHHHHHHHHHTBTTBCHEEEEEEESSEEEEEEEEETTEBHHHHH
T ss_pred CCCEEEEEEEECCCCeEEEEEEeccccccccccchhhhhhhccccccccccccccccccccccccccccccccccccccc
Confidence 8999999999844 4588888876654433 3356999999999999999999999999999999999999999999
Q ss_pred ccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccC----CCCCccccCccCCC
Q 014478 77 FHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNS----RDGKSYSTNLAFTP 152 (424)
Q Consensus 77 ~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~----~~~~~~~gt~~y~a 152 (424)
.. ...+++.+++.++.|++.||.+||+++ ++|+||||+||+++.++.++|+|||.+... .......++..|+|
T Consensus 90 ~~--~~~~~~~~~~~~~~qi~~~L~~Lh~~~-i~H~dikp~NIl~~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~y~a 166 (260)
T PF00069_consen 90 QK--NKPLSEEEILKIAYQILEALAYLHSKG-IVHRDIKPENILLDENGEVKLIDFGSSVKLSENNENFNPFVGTPEYMA 166 (260)
T ss_dssp HH--HSSBBHHHHHHHHHHHHHHHHHHHHTT-EEESSBSGGGEEESTTSEEEESSGTTTEESTSTTSEBSSSSSSGGGSC
T ss_pred cc--ccccccccccccccccccccccccccc-cccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 62 567899999999999999999999999 999999999999999999999999998752 12234567899999
Q ss_pred ccccc-cCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhc--ccCCCCCchhHHHHHHHHHHhcccCc
Q 014478 153 PEYMR-TGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDS--ALEGHFSNDEGTELVRLASRCLQSEA 229 (424)
Q Consensus 153 PE~~~-~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~li~~cl~~dp 229 (424)
||++. +...+.++||||||+++|+|++|..|+........ .......... ..........+.++.+++.+||+.||
T Consensus 167 PE~~~~~~~~~~~~Di~slG~il~~l~~~~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p 245 (260)
T PF00069_consen 167 PEVLQQGKKYTRKSDIWSLGIILYELLTGKLPFEESNSDDQ-LEIIEKILKRPLPSSSQQSREKSEELRDLIKKMLSKDP 245 (260)
T ss_dssp HHHHTTTSSBSTHHHHHHHHHHHHHHHHSSSSSTTSSHHHH-HHHHHHHHHTHHHHHTTSHTTSHHHHHHHHHHHSSSSG
T ss_pred cccccccccccccccccccccccccccccccccccccchhh-hhhhhhcccccccccccccchhHHHHHHHHHHHccCCh
Confidence 99998 77899999999999999999999988776410100 0011111110 00111111224799999999999999
Q ss_pred CCCCCHHHHHHH
Q 014478 230 RERPNAKSLVIS 241 (424)
Q Consensus 230 ~~Rps~~~~~~~ 241 (424)
++|||+.+++++
T Consensus 246 ~~R~~~~~l~~~ 257 (260)
T PF00069_consen 246 EQRPSAEELLKH 257 (260)
T ss_dssp GGSTTHHHHHTS
T ss_pred hHCcCHHHHhcC
Confidence 999999999854
|
Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A .... |
| >cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-37 Score=282.32 Aligned_cols=234 Identities=15% Similarity=0.197 Sum_probs=191.8
Q ss_pred CCCcccceeee--ecceecccccCC---CchhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHhHh
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLES---SDLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHL 76 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~---~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~l 76 (424)
|++|.+|.+.. .+..+++|.+.. .......+.+|+.++++++||||+++++++...+..++||||+++++|.+++
T Consensus 11 g~~g~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~ 90 (256)
T cd08218 11 GSFGKAILVKSKEDGKQYVIKEINISKMSPKEREESRKEVAVLSNMKHPNIVQYQESFEENGNLYIVMDYCEGGDLYKKI 90 (256)
T ss_pred CCceEEEEEEEcCCCCEEEEEEEEhHhCChHHHHHHHHHHHHHHhCCCCCeeeeEeeecCCCeEEEEEecCCCCcHHHHH
Confidence 78899998776 456667776543 2234567899999999999999999999999999999999999999999998
Q ss_pred ccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCC----CccccCccCCC
Q 014478 77 FHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG----KSYSTNLAFTP 152 (424)
Q Consensus 77 ~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~----~~~~gt~~y~a 152 (424)
.......+++.+++.++.|++.||.|||+++ ++|+||+|+||+++.++.++|+|||++...... ....++..|+|
T Consensus 91 ~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~-i~h~~l~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (256)
T cd08218 91 NAQRGVLFPEDQILDWFVQICLALKHVHDRK-ILHRDIKSQNIFLTKDGTIKLGDFGIARVLNSTVELARTCIGTPYYLS 169 (256)
T ss_pred HhccCCCCCHHHHHHHHHHHHHHHHHHHhCC-EecCCCCHHHEEEcCCCCEEEeeccceeecCcchhhhhhccCCccccC
Confidence 6544456899999999999999999999999 999999999999999999999999998765432 23457889999
Q ss_pred ccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHHHHHHHHHhcccCcCCC
Q 014478 153 PEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARER 232 (424)
Q Consensus 153 PE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~R 232 (424)
||++.+...+.++|+|||||++++|++|+.|+........ ..... .......+...+.++.++|.+||+.+|++|
T Consensus 170 pe~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~~----~~~~~-~~~~~~~~~~~~~~~~~li~~~l~~~p~~R 244 (256)
T cd08218 170 PEICENRPYNNKSDIWALGCVLYEMCTLKHAFEAGNMKNL----VLKII-RGSYPPVSSHYSYDLRNLVSQLFKRNPRDR 244 (256)
T ss_pred HHHhCCCCCCCccchhHHHHHHHHHHcCCCCccCCCHHHH----HHHHh-cCCCCCCcccCCHHHHHHHHHHhhCChhhC
Confidence 9999988899999999999999999999988765321111 11111 112223455678899999999999999999
Q ss_pred CCHHHHHHH
Q 014478 233 PNAKSLVIS 241 (424)
Q Consensus 233 ps~~~~~~~ 241 (424)
|++.+++.+
T Consensus 245 p~~~~vl~~ 253 (256)
T cd08218 245 PSVNSILEK 253 (256)
T ss_pred cCHHHHhhC
Confidence 999999864
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti |
| >cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-37 Score=289.01 Aligned_cols=238 Identities=17% Similarity=0.209 Sum_probs=192.7
Q ss_pred CCCcccceeee--ecceecccccCCCc----hhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHhH
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESSD----LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKH 75 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~~----~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~ 75 (424)
|++|.||.+.+ .+..+++|++.... .....+.+|+++++.++|||++++++++..+...++||||+.| +|.+.
T Consensus 36 G~~~~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~g-~l~~~ 114 (317)
T cd06635 36 GSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPNSIEYKGCYLREHTAWLVMEYCLG-SASDL 114 (317)
T ss_pred CCCeEEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCeEEEEEeCCCC-CHHHH
Confidence 78999999987 45667777664322 2345788899999999999999999999999999999999975 78777
Q ss_pred hccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCCCccccCccCCCccc
Q 014478 76 LFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLAFTPPEY 155 (424)
Q Consensus 76 l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~gt~~y~aPE~ 155 (424)
+.. ...++++.++..++.|++.||.|||+++ ++||||+|+||+++.++.++|+|||++..........++..|+|||.
T Consensus 115 ~~~-~~~~l~~~~~~~i~~~i~~~l~~lH~~~-i~H~dL~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~y~aPE~ 192 (317)
T cd06635 115 LEV-HKKPLQEVEIAAITHGALQGLAYLHSHN-MIHRDIKAGNILLTEPGQVKLADFGSASIASPANSFVGTPYWMAPEV 192 (317)
T ss_pred HHH-hcCCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCCcccEEECCCCCEEEecCCCccccCCcccccCCccccChhh
Confidence 753 3567899999999999999999999999 99999999999999999999999999887766666788999999999
Q ss_pred cc---cCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHHHHHHHHHhcccCcCCC
Q 014478 156 MR---TGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARER 232 (424)
Q Consensus 156 ~~---~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~R 232 (424)
+. .+.++.++|||||||++|+|++|..||...... ...............+..+++.+.+++.+||+.+|.+|
T Consensus 193 ~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~R 268 (317)
T cd06635 193 ILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAM----SALYHIAQNESPTLQSNEWSDYFRNFVDSCLQKIPQDR 268 (317)
T ss_pred hhcCCCCCCCccccHHHHHHHHHHHHhCCCCCCCccHH----HHHHHHHhccCCCCCCccccHHHHHHHHHHccCCcccC
Confidence 74 456889999999999999999999876543111 11111222222222334567789999999999999999
Q ss_pred CCHHHHHHHHHHHh
Q 014478 233 PNAKSLVISLMSLQ 246 (424)
Q Consensus 233 ps~~~~~~~l~~~~ 246 (424)
|++.+++.++....
T Consensus 269 pt~~~il~~~~~~~ 282 (317)
T cd06635 269 PTSEELLKHMFVLR 282 (317)
T ss_pred cCHHHHHhChhhhc
Confidence 99999998766544
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron |
| >cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.1e-38 Score=291.28 Aligned_cols=233 Identities=18% Similarity=0.220 Sum_probs=188.4
Q ss_pred CCCcccceeee--ecceecccccCCCc-hhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHhHhcc
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESSD-LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFH 78 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~ 78 (424)
|++|.||.+.. .+..+++|++.... ...+.+.+|+.+++.++||||+++++.+..++..++||||+++++|.+++.
T Consensus 33 g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~lv~e~~~~~~L~~~~~- 111 (292)
T cd06658 33 GSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHENVVDMYNSYLVGDELWVVMEFLEGGALTDIVT- 111 (292)
T ss_pred CCCeEEEEEEECCCCCEEEEEEEecchHHHHHHHHHHHHHHHhCCCCcHHHHHHheecCCeEEEEEeCCCCCcHHHHHh-
Confidence 88999998876 45667777764433 345678899999999999999999999999999999999999999999884
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCC----CccccCccCCCcc
Q 014478 79 WETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG----KSYSTNLAFTPPE 154 (424)
Q Consensus 79 ~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~----~~~~gt~~y~aPE 154 (424)
...+++.++..++.||+.||.|||+++ ++||||||+||+++.++.++|+|||++...... ....++..|+|||
T Consensus 112 --~~~l~~~~~~~~~~qi~~~l~~LH~~~-ivH~dlkp~Nill~~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~y~aPE 188 (292)
T cd06658 112 --HTRMNEEQIATVCLSVLRALSYLHNQG-VIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVPKRKSLVGTPYWMAPE 188 (292)
T ss_pred --cCCCCHHHHHHHHHHHHHHHHHHHHCC-EeecCCCHHHEEEcCCCCEEEccCcchhhcccccccCceeecCccccCHH
Confidence 346899999999999999999999999 999999999999999999999999998754322 2345788999999
Q ss_pred ccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHHHHHHHHHhcccCcCCCCC
Q 014478 155 YMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERPN 234 (424)
Q Consensus 155 ~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps 234 (424)
.+.+..++.++||||||+++|||++|..|+........ ............ ......+..+.+++.+||..||++|||
T Consensus 189 ~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~-~~~~~~~~~~~~--~~~~~~~~~~~~li~~~l~~~P~~Rpt 265 (292)
T cd06658 189 VISRLPYGTEVDIWSLGIMVIEMIDGEPPYFNEPPLQA-MRRIRDNLPPRV--KDSHKVSSVLRGFLDLMLVREPSQRAT 265 (292)
T ss_pred HHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHHhcCCCcc--ccccccCHHHHHHHHHHccCChhHCcC
Confidence 99888899999999999999999999988765321110 000111111111 112245678999999999999999999
Q ss_pred HHHHHHH
Q 014478 235 AKSLVIS 241 (424)
Q Consensus 235 ~~~~~~~ 241 (424)
+++++++
T Consensus 266 ~~~il~~ 272 (292)
T cd06658 266 AQELLQH 272 (292)
T ss_pred HHHHhhC
Confidence 9999865
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express |
| >cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-37 Score=287.84 Aligned_cols=231 Identities=18% Similarity=0.228 Sum_probs=191.7
Q ss_pred CCCcccceeee--ecceecccccCCCc----hhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHhH
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESSD----LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKH 75 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~~----~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~ 75 (424)
|++|.||.+.+ .+..+++|++.... ...+.+.+|++++++++||||+++++++..+...++||||+++++|.++
T Consensus 12 g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~ 91 (290)
T cd05580 12 GSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRHPFLVNLYGSFQDDSNLYLVMEYVPGGELFSH 91 (290)
T ss_pred CCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCccceeeEEEcCCeEEEEEecCCCCCHHHH
Confidence 88999999988 45667777765432 2356788999999999999999999999999999999999999999999
Q ss_pred hccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCC-CccccCccCCCcc
Q 014478 76 LFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG-KSYSTNLAFTPPE 154 (424)
Q Consensus 76 l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~-~~~~gt~~y~aPE 154 (424)
+.. ...+++..+..++.|++.||.|||+++ ++||||+|+||+++.++.+||+|||+++..... ....+++.|+|||
T Consensus 92 ~~~--~~~l~~~~~~~~~~qil~~l~~lH~~~-i~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~y~aPE 168 (290)
T cd05580 92 LRK--SGRFPEPVARFYAAQVVLALEYLHSLD-IVYRDLKPENLLLDSDGYIKITDFGFAKRVKGRTYTLCGTPEYLAPE 168 (290)
T ss_pred HHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-EecCCCCHHHEEECCCCCEEEeeCCCccccCCCCCCCCCCccccChh
Confidence 965 467899999999999999999999999 999999999999999999999999998876544 3346789999999
Q ss_pred ccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHHHHHHHHHhcccCcCCCC-
Q 014478 155 YMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERP- 233 (424)
Q Consensus 155 ~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rp- 233 (424)
.+.+...+.++||||||+++|+|++|..||...... ........ .....+...+..+.+++.+||..||.+|+
T Consensus 169 ~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~----~~~~~~~~--~~~~~~~~~~~~l~~li~~~l~~~p~~R~~ 242 (290)
T cd05580 169 IILSKGYGKAVDWWALGILIYEMLAGYPPFFDDNPI----QIYEKILE--GKVRFPSFFSPDAKDLIRNLLQVDLTKRLG 242 (290)
T ss_pred hhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHH----HHHHHHhc--CCccCCccCCHHHHHHHHHHccCCHHHccC
Confidence 998888899999999999999999999887654211 11111111 12234555678999999999999999998
Q ss_pred ----CHHHHHHH
Q 014478 234 ----NAKSLVIS 241 (424)
Q Consensus 234 ----s~~~~~~~ 241 (424)
++++++.+
T Consensus 243 ~~~~~~~~l~~~ 254 (290)
T cd05580 243 NLKNGVNDIKNH 254 (290)
T ss_pred cccCCHHHHHcC
Confidence 77777755
|
Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi |
| >cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-37 Score=285.22 Aligned_cols=237 Identities=17% Similarity=0.202 Sum_probs=186.8
Q ss_pred CCCcccceeee--ecceecccccCCCch-----------hhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCC
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESSDL-----------GETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMP 68 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~~~-----------~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~ 68 (424)
|++|.||.+.. .+..+++|.+..... ..+.+.+|+.+++.++||||+++++++...+..++||||++
T Consensus 12 g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 91 (272)
T cd06629 12 GTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQYLGFETTEEYLSIFLEYVP 91 (272)
T ss_pred cCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCcceEEEEeccCCceEEEEecCC
Confidence 89999999976 456677776532110 12467789999999999999999999999999999999999
Q ss_pred CCCHHhHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCC------C
Q 014478 69 NETLAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG------K 142 (424)
Q Consensus 69 ~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~------~ 142 (424)
+++|.+++.. ...+++..+..++.|++.||.|||+++ ++||||+|+||+++.++.++|+|||+++..... .
T Consensus 92 ~~~L~~~l~~--~~~l~~~~~~~~~~qi~~~l~~lH~~~-i~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~ 168 (272)
T cd06629 92 GGSIGSCLRT--YGRFEEQLVRFFTEQVLEGLAYLHSKG-ILHRDLKADNLLVDADGICKISDFGISKKSDDIYDNDQNM 168 (272)
T ss_pred CCcHHHHHhh--ccCCCHHHHHHHHHHHHHHHHHHhhCC-eeecCCChhhEEEcCCCeEEEeeccccccccccccccccc
Confidence 9999999965 357899999999999999999999999 999999999999999999999999998765422 2
Q ss_pred ccccCccCCCccccccCC--CCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHHHHHH
Q 014478 143 SYSTNLAFTPPEYMRTGR--VTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRL 220 (424)
Q Consensus 143 ~~~gt~~y~aPE~~~~~~--~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 220 (424)
...++..|+|||.+.... ++.++|+||||+++|++++|..|+............................++.++.++
T Consensus 169 ~~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 248 (272)
T cd06629 169 SMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRPWSDEEAIAAMFKLGNKRSAPPIPPDVSMNLSPVALDF 248 (272)
T ss_pred cccCCccccCHHHhccccCCCCccchhHHHHHHHHHHHhCCCCCcCcchHHHHHHhhccccCCcCCccccccCCHHHHHH
Confidence 235788999999987654 788999999999999999999887543111000000000011111122223457899999
Q ss_pred HHHhcccCcCCCCCHHHHHHH
Q 014478 221 ASRCLQSEARERPNAKSLVIS 241 (424)
Q Consensus 221 i~~cl~~dp~~Rps~~~~~~~ 241 (424)
+.+||..||++|||+++++.+
T Consensus 249 i~~~l~~~p~~Rps~~~il~~ 269 (272)
T cd06629 249 LNACFTINPDNRPTARELLQH 269 (272)
T ss_pred HHHHhcCChhhCCCHHHHhhC
Confidence 999999999999999999865
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte |
| >cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-37 Score=284.21 Aligned_cols=232 Identities=18% Similarity=0.242 Sum_probs=184.7
Q ss_pred CCCcccceeee--ecceecccccCCCc------hhhhHHHHHHHHHhcCCCcCcceeEEEEEeC--CeeeEEEecCCCCC
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESSD------LGETLNLEEAKAVGNLRSERLANLIGCCYEA--DERLLVAEFMPNET 71 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~~------~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~--~~~~lv~e~~~~gs 71 (424)
|++|.||.+.. .+..+++|++.... .....+.+|+.++++++||||+++++++... ...+++|||+++++
T Consensus 13 g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~l~~e~~~~~~ 92 (266)
T cd06651 13 GAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQYYGCLRDRAEKTLTIFMEYMPGGS 92 (266)
T ss_pred CCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCeeeEEEEEEcCCCCEEEEEEeCCCCCc
Confidence 88999999986 45666766654221 2345788899999999999999999998763 56789999999999
Q ss_pred HHhHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCC-------Ccc
Q 014478 72 LAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG-------KSY 144 (424)
Q Consensus 72 L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~-------~~~ 144 (424)
|.+++.. ...+++..++.++.|++.||.|||+.+ ++||||||+||+++.++.++|+|||+++..... ...
T Consensus 93 L~~~l~~--~~~l~~~~~~~~~~qi~~~l~~LH~~~-i~H~~l~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~ 169 (266)
T cd06651 93 VKDQLKA--YGALTESVTRKYTRQILEGMSYLHSNM-IVHRDIKGANILRDSAGNVKLGDFGASKRLQTICMSGTGIRSV 169 (266)
T ss_pred HHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHhCC-eeeCCCCHHHEEECCCCCEEEccCCCccccccccccCCccccC
Confidence 9999864 456899999999999999999999999 999999999999999999999999998754321 224
Q ss_pred ccCccCCCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHHHHHHHHHh
Q 014478 145 STNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRC 224 (424)
Q Consensus 145 ~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c 224 (424)
.++..|+|||++.+..++.++|||||||++|+|++|+.||..... ................+..+++.+.+++ +|
T Consensus 170 ~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~el~~g~~pf~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~li-~~ 244 (266)
T cd06651 170 TGTPYWMSPEVISGEGYGRKADVWSLGCTVVEMLTEKPPWAEYEA----MAAIFKIATQPTNPQLPSHISEHARDFL-GC 244 (266)
T ss_pred CccccccCHHHhCCCCCCchhhhHHHHHHHHHHHHCCCCccccch----HHHHHHHhcCCCCCCCchhcCHHHHHHH-HH
Confidence 578899999999988899999999999999999999987754311 1111111112223344555677888888 68
Q ss_pred cccCcCCCCCHHHHHHH
Q 014478 225 LQSEARERPNAKSLVIS 241 (424)
Q Consensus 225 l~~dp~~Rps~~~~~~~ 241 (424)
|..+|++||++++++.+
T Consensus 245 ~~~~p~~Rp~~~eil~h 261 (266)
T cd06651 245 IFVEARHRPSAEELLRH 261 (266)
T ss_pred hcCChhhCcCHHHHhcC
Confidence 88999999999999854
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development |
| >cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-37 Score=283.40 Aligned_cols=232 Identities=17% Similarity=0.196 Sum_probs=185.7
Q ss_pred CCCcccceeee--ecceecccccCCCc------hhhhHHHHHHHHHhcCCCcCcceeEEEEEeC--CeeeEEEecCCCCC
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESSD------LGETLNLEEAKAVGNLRSERLANLIGCCYEA--DERLLVAEFMPNET 71 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~~------~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~--~~~~lv~e~~~~gs 71 (424)
|++|.||.+.+ .+..+++|.+.... ...+.+.+|+.++++++||||+++++++.+. ...+++|||+++++
T Consensus 13 g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~v~e~~~~~~ 92 (265)
T cd06652 13 GAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQYYGCLRDPMERTLSIFMEHMPGGS 92 (265)
T ss_pred CCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCeeeEEeEeccCCCceEEEEEEecCCCc
Confidence 88999999887 45667777653221 2245788899999999999999999998763 45789999999999
Q ss_pred HHhHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCC-------CCcc
Q 014478 72 LAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRD-------GKSY 144 (424)
Q Consensus 72 L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~-------~~~~ 144 (424)
|.+++.. ...+++..+.+++.|++.||.|||+++ ++|+||||+||+++.++.++|+|||+++.... ....
T Consensus 93 L~~~l~~--~~~~~~~~~~~~~~~l~~~l~~lH~~~-i~H~dl~p~nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~ 169 (265)
T cd06652 93 IKDQLKS--YGALTENVTRKYTRQILEGVSYLHSNM-IVHRDIKGANILRDSVGNVKLGDFGASKRLQTICLSGTGMKSV 169 (265)
T ss_pred HHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHhCC-EecCCCCHHHEEecCCCCEEECcCccccccccccccccccccC
Confidence 9999864 346889999999999999999999999 99999999999999999999999999875432 1234
Q ss_pred ccCccCCCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHHHHHHHHHh
Q 014478 145 STNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRC 224 (424)
Q Consensus 145 ~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c 224 (424)
.++..|+|||++.+..++.++|||||||++|+|++|+.||...... ...............+...+..+.+++.+|
T Consensus 170 ~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 245 (265)
T cd06652 170 TGTPYWMSPEVISGEGYGRKADIWSVGCTVVEMLTEKPPWAEFEAM----AAIFKIATQPTNPVLPPHVSDHCRDFLKRI 245 (265)
T ss_pred CCCccccChhhhcCCCCCcchhHHHHHHHHHHHhhCCCCCCccchH----HHHHHHhcCCCCCCCchhhCHHHHHHHHHH
Confidence 5788999999998888999999999999999999999887543111 111112222223334556677899999999
Q ss_pred cccCcCCCCCHHHHHHH
Q 014478 225 LQSEARERPNAKSLVIS 241 (424)
Q Consensus 225 l~~dp~~Rps~~~~~~~ 241 (424)
|. +|++||++++++.+
T Consensus 246 l~-~p~~Rp~~~~il~~ 261 (265)
T cd06652 246 FV-EAKLRPSADELLRH 261 (265)
T ss_pred hc-ChhhCCCHHHHhcC
Confidence 95 99999999999854
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re |
| >cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-37 Score=283.43 Aligned_cols=235 Identities=19% Similarity=0.276 Sum_probs=189.5
Q ss_pred CCCcccceeee--ecceecccccCCCc--hhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHhHhc
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESSD--LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLF 77 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~~--~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~ 77 (424)
|++|.||++.+ .+..+++|++.... ...+.+.+|+++++.++|+||+++++.+..++..++|||++++++|.+++.
T Consensus 12 g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~~~~~~l~~~~~ 91 (267)
T cd06610 12 GATAVVYAAICLPNNEKVAIKRIDLEKCQTSVDELRKEVQAMSQCNHPNVVKYYTSFVVGDELWLVMPYLSGGSLLDIMK 91 (267)
T ss_pred CCCeEEEEEEEcCCCcEEEEEEeccCCcchHHHHHHHHHHHHHhcCCCCEEEEEEEEeeCCEEEEEEeccCCCcHHHHHH
Confidence 89999999987 44566777764332 345788999999999999999999999999999999999999999999996
Q ss_pred cCCC-CCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCCC--------ccccCc
Q 014478 78 HWET-QPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGK--------SYSTNL 148 (424)
Q Consensus 78 ~~~~-~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~~--------~~~gt~ 148 (424)
.... ..+++..+..++.|++.||.|||+.+ ++||||||+||++++++.++|+|||++....... ...++.
T Consensus 92 ~~~~~~~~~~~~~~~~~~ql~~al~~lh~~~-i~h~~l~p~ni~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~ 170 (267)
T cd06610 92 SSYPRGGLDEAIIATVLKEVLKGLEYLHSNG-QIHRDIKAGNILLGEDGSVKIADFGVSASLADGGDRTRKVRKTFVGTP 170 (267)
T ss_pred HhcccCCCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCCHHhEEEcCCCCEEEcccchHHHhccCccccccccccccCCh
Confidence 5322 56899999999999999999999999 9999999999999999999999999987654322 235788
Q ss_pred cCCCccccccC-CCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhc---ccCCCC-CchhHHHHHHHHHH
Q 014478 149 AFTPPEYMRTG-RVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDS---ALEGHF-SNDEGTELVRLASR 223 (424)
Q Consensus 149 ~y~aPE~~~~~-~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~-~~~~~~~l~~li~~ 223 (424)
.|+|||++... ..+.++|+|||||++|+|++|+.|+...... ......... ...... ...+++++.+++.+
T Consensus 171 ~y~~Pe~~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ 246 (267)
T cd06610 171 CWMAPEVMEQVHGYDFKADIWSFGITAIELATGAAPYSKYPPM----KVLMLTLQNDPPSLETGADYKKYSKSFRKMISL 246 (267)
T ss_pred hhcChHHHccccCcCcccchHhHhHHHHHHHhCCCCccccChh----hhHHHHhcCCCCCcCCccccccccHHHHHHHHH
Confidence 99999999877 6889999999999999999999887543111 111111111 111111 12567889999999
Q ss_pred hcccCcCCCCCHHHHHHH
Q 014478 224 CLQSEARERPNAKSLVIS 241 (424)
Q Consensus 224 cl~~dp~~Rps~~~~~~~ 241 (424)
||..||++|||+.+++.+
T Consensus 247 ~l~~~p~~Rp~~~~ll~~ 264 (267)
T cd06610 247 CLQKDPSKRPTAEELLKH 264 (267)
T ss_pred HcCCChhhCcCHHHHhhC
Confidence 999999999999999864
|
Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1 |
| >cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-37 Score=288.49 Aligned_cols=238 Identities=16% Similarity=0.150 Sum_probs=184.2
Q ss_pred CCCcccceeee--ecceecccccCCCc---hhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHhHh
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESSD---LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHL 76 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~~---~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~l 76 (424)
|++|.||.+.. .+..+++|++.... .....+.+|+.++++++||||+++++++..+...++||||++ ++|.+++
T Consensus 11 g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~-~~l~~~~ 89 (285)
T cd07861 11 GTYGVVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKELQHPNIVCLQDVLMQESRLYLIFEFLS-MDLKKYL 89 (285)
T ss_pred cCceEEEEEEECCCCcEEEEEEeccccccCCchHHHHHHHHHHHhcCCCCEeeeEEEEeeCCeEEEEEecCC-CCHHHHH
Confidence 78999999987 45667777664332 224578899999999999999999999999999999999997 5898888
Q ss_pred ccCC-CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCC----CccccCccCC
Q 014478 77 FHWE-TQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG----KSYSTNLAFT 151 (424)
Q Consensus 77 ~~~~-~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~----~~~~gt~~y~ 151 (424)
.... +..+++.++..++.|++.||.|||+++ ++||||||+||+++.++.++|+|||++...... ....+++.|+
T Consensus 90 ~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~-i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~ 168 (285)
T cd07861 90 DSLPKGQYMDAELVKSYLYQILQGILFCHSRR-VLHRDLKPQNLLIDNKGVIKLADFGLARAFGIPVRVYTHEVVTLWYR 168 (285)
T ss_pred hcCCCCCcCCHHHHHHHHHHHHHHHHHHHhCC-eeecCCCHHHEEEcCCCcEEECcccceeecCCCcccccCCccccccc
Confidence 5432 357899999999999999999999999 999999999999999999999999998754322 2235678999
Q ss_pred CccccccC-CCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhh--------------------hhHhhhc---ccCC
Q 014478 152 PPEYMRTG-RVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKN--------------------FLLLMDS---ALEG 207 (424)
Q Consensus 152 aPE~~~~~-~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~--------------------~~~~~~~---~~~~ 207 (424)
|||++.+. .++.++|||||||++|+|++|+.||............ ....... ....
T Consensus 169 aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (285)
T cd07861 169 APEVLLGSPRYSTPVDIWSIGTIFAEMATKKPLFHGDSEIDQLFRIFRILGTPTEDVWPGVTSLPDYKNTFPKWKKGSLR 248 (285)
T ss_pred ChHHhcCCCCcCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhcchhhHHHHhhccccCcchhH
Confidence 99988754 4788999999999999999999877643111000000 0000000 0000
Q ss_pred CCCchhHHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 014478 208 HFSNDEGTELVRLASRCLQSEARERPNAKSLVIS 241 (424)
Q Consensus 208 ~~~~~~~~~l~~li~~cl~~dp~~Rps~~~~~~~ 241 (424)
.....+++++.++|.+||..||++|||+.+++.+
T Consensus 249 ~~~~~~~~~~~~li~~~l~~dP~~Rpt~~~ll~~ 282 (285)
T cd07861 249 SAVKNLDEDGLDLLEKMLIYDPAKRISAKKALNH 282 (285)
T ss_pred HhcCCCCHHHHHHHHHHhcCChhhCCCHHHHhcC
Confidence 1122357789999999999999999999999854
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 |
| >cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.9e-38 Score=286.06 Aligned_cols=237 Identities=16% Similarity=0.255 Sum_probs=191.3
Q ss_pred CCCcccceeeee--cceecccccCCC--chhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHhHhc
Q 014478 2 GGRCSKFSICWF--HCHLKSSVLESS--DLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLF 77 (424)
Q Consensus 2 G~~g~v~~~~~~--~~~v~~~~~~~~--~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~ 77 (424)
|++|.||.+.+. +..+++|.+... ......+.+|++++++++||||+++++++......+++|||+++++|.+++.
T Consensus 12 g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~ 91 (265)
T cd06605 12 GNSGVVSKVLHRPTGKIMAVKTIRLEINEAIQKQILRELDILHKCNSPYIVGFYGAFYNNGDISICMEYMDGGSLDKILK 91 (265)
T ss_pred CCCeEEEEEEEcCCCcEEEEEEEecccChHHHHHHHHHHHHHHHCCCCchhhhheeeecCCEEEEEEEecCCCcHHHHHH
Confidence 889999999884 566777766544 2345678899999999999999999999999999999999999999999996
Q ss_pred cCCCCCCCHHHHHHHHHHHHHHHHHHHh-CCCcccccCCCCCeeecCCCCeEEccccccccCCCC--CccccCccCCCcc
Q 014478 78 HWETQPMKWAMRLRVALYLAQALEYCSS-KGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG--KSYSTNLAFTPPE 154 (424)
Q Consensus 78 ~~~~~~l~~~~~~~i~~qi~~~L~~lH~-~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~--~~~~gt~~y~aPE 154 (424)
.. ...+++..+.+++.|++.||.|||+ .+ ++|+||||+||+++.++.++|+|||.+...... ....++..|+|||
T Consensus 92 ~~-~~~~~~~~~~~~~~~l~~~l~~lH~~~~-i~H~dl~~~ni~~~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~y~~PE 169 (265)
T cd06605 92 EV-QGRIPERILGKIAVAVLKGLTYLHEKHK-IIHRDVKPSNILVNSRGQIKLCDFGVSGQLVNSLAKTFVGTSSYMAPE 169 (265)
T ss_pred Hc-cCCCCHHHHHHHHHHHHHHHHHHcCCCC-eecCCCCHHHEEECCCCCEEEeecccchhhHHHHhhcccCChhccCHH
Confidence 52 2678999999999999999999999 88 999999999999999999999999998755322 2256788999999
Q ss_pred ccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhh-hhhhHhhhcccCCCCCch-hHHHHHHHHHHhcccCcCCC
Q 014478 155 YMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRS-KNFLLLMDSALEGHFSND-EGTELVRLASRCLQSEARER 232 (424)
Q Consensus 155 ~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~-~~~~l~~li~~cl~~dp~~R 232 (424)
.+.+..++.++||||||+++|+|++|+.|+.......... ........ ......+.. ++.++.++|.+||..||++|
T Consensus 170 ~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~li~~~l~~~p~~R 248 (265)
T cd06605 170 RIQGNDYSVKSDIWSLGLSLIELATGRFPYPPENDPPDGIFELLQYIVN-EPPPRLPSGKFSPDFQDFVNLCLIKDPRER 248 (265)
T ss_pred HHcCCCCCchhhHHHHHHHHHHHHhCCCCCCccccccccHHHHHHHHhc-CCCCCCChhhcCHHHHHHHHHHcCCCchhC
Confidence 9998889999999999999999999998876431100000 01111111 111222332 67889999999999999999
Q ss_pred CCHHHHHHH
Q 014478 233 PNAKSLVIS 241 (424)
Q Consensus 233 ps~~~~~~~ 241 (424)
||+.+++.+
T Consensus 249 pt~~~ll~~ 257 (265)
T cd06605 249 PSYKELLEH 257 (265)
T ss_pred cCHHHHhhC
Confidence 999999865
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity |
| >cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-37 Score=284.22 Aligned_cols=231 Identities=16% Similarity=0.245 Sum_probs=191.1
Q ss_pred CCCcccceeee--ecceecccccCCCc--hhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHhHhc
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESSD--LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLF 77 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~~--~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~ 77 (424)
|++|.||.+.+ .+..+++|+..... .....+.+|+.++.+++||||+++++++..+...++||||+++++|.+++.
T Consensus 15 G~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~l~~~i~ 94 (277)
T cd06641 15 GSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLE 94 (277)
T ss_pred cCCeEEEEEEECCCCcEEEEEEeccccchHHHHHHHHHHHHHHhcCCCCEeEEEEEEEeCCeEEEEEEeCCCCcHHHHHh
Confidence 88999999976 45667777654332 334678899999999999999999999999999999999999999999984
Q ss_pred cCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCC----CccccCccCCCc
Q 014478 78 HWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG----KSYSTNLAFTPP 153 (424)
Q Consensus 78 ~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~----~~~~gt~~y~aP 153 (424)
...+++..+..++.|++.+|.+||+++ ++|+||+|+||+++.++.++|+|||++...... ....++..|+||
T Consensus 95 ---~~~~~~~~~~~~~~~l~~~l~~lh~~~-i~h~dl~p~Ni~i~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~~P 170 (277)
T cd06641 95 ---PGPLDETQIATILREILKGLDYLHSEK-KIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAP 170 (277)
T ss_pred ---cCCCCHHHHHHHHHHHHHHHHHHccCC-eecCCCCHHhEEECCCCCEEEeecccceecccchhhhccccCCccccCh
Confidence 356899999999999999999999999 999999999999999999999999998765432 234578899999
Q ss_pred cccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHHHHHHHHHhcccCcCCCC
Q 014478 154 EYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERP 233 (424)
Q Consensus 154 E~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rp 233 (424)
|.+.+...+.++|+|||||++|+|++|..|+..... ......+........+..++.++.+++.+||..+|.+||
T Consensus 171 E~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp 245 (277)
T cd06641 171 EVIKQSAYDSKADIWSLGITAIELAKGEPPHSELHP-----MKVLFLIPKNNPPTLEGNYSKPLKEFVEACLNKEPSFRP 245 (277)
T ss_pred hhhccCCCCchhhHHHHHHHHHHHHcCCCCCCccch-----HHHHHHHhcCCCCCCCcccCHHHHHHHHHHccCChhhCc
Confidence 999888889999999999999999999977654211 111111222223334456678999999999999999999
Q ss_pred CHHHHHHH
Q 014478 234 NAKSLVIS 241 (424)
Q Consensus 234 s~~~~~~~ 241 (424)
++.+++.+
T Consensus 246 ~~~~~l~~ 253 (277)
T cd06641 246 TAKELLKH 253 (277)
T ss_pred CHHHHHhC
Confidence 99999986
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int |
| >cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-37 Score=292.78 Aligned_cols=237 Identities=12% Similarity=0.177 Sum_probs=176.4
Q ss_pred CCCcccceeeee----cceecccccCCCchhhhHHHHHHHHHhcCCCcCcceeEEEEEe--CCeeeEEEecCCCCCHHhH
Q 014478 2 GGRCSKFSICWF----HCHLKSSVLESSDLGETLNLEEAKAVGNLRSERLANLIGCCYE--ADERLLVAEFMPNETLAKH 75 (424)
Q Consensus 2 G~~g~v~~~~~~----~~~v~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~--~~~~~lv~e~~~~gsL~~~ 75 (424)
|+||.||.+.+. +..+++|.+..... ...+.+|+++|++++||||+++++++.. +...+++|||+.+ +|.++
T Consensus 12 G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~~-~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~~-~l~~~ 89 (317)
T cd07868 12 GTYGHVYKAKRKDGKDDRDYALKQIEGTGI-SMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAEH-DLWHI 89 (317)
T ss_pred CCCeEEEEEEEccCCCCceEEEEEECCCCC-cHHHHHHHHHHHhcCCCCCcceeeeEecCCCcEEEEEEeccCC-CHHHH
Confidence 899999999863 35567777654432 3457789999999999999999999864 4567899999965 88887
Q ss_pred hccC-------CCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeee----cCCCCeEEccccccccCCCC---
Q 014478 76 LFHW-------ETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILF----DKDGNPRLSSFGLMKNSRDG--- 141 (424)
Q Consensus 76 l~~~-------~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill----~~~~~~kl~Dfg~~~~~~~~--- 141 (424)
+... ....+++..+..++.||+.||.|||+++ |+||||||+|||+ +.++.+||+|||+++.....
T Consensus 90 ~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~-ivHrDlkp~Nil~~~~~~~~~~~kl~DfG~a~~~~~~~~~ 168 (317)
T cd07868 90 IKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANW-VLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKP 168 (317)
T ss_pred HHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHhCC-EEcCCCCHHHEEEecCCCCcCcEEEeecCceeccCCCCcc
Confidence 7421 1235889999999999999999999999 9999999999999 45678999999999765422
Q ss_pred ----CccccCccCCCccccccC-CCCCCcceehhHHHHHHHhhCCCCCCchhhHHHh-----h---hhhhHh--------
Q 014478 142 ----KSYSTNLAFTPPEYMRTG-RVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIR-----S---KNFLLL-------- 200 (424)
Q Consensus 142 ----~~~~gt~~y~aPE~~~~~-~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~-----~---~~~~~~-------- 200 (424)
....+|+.|+|||++.+. .++.++||||+||++|+|++|+.||......... . ......
T Consensus 169 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (317)
T cd07868 169 LADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFNVMGFPADKD 248 (317)
T ss_pred ccccCCccccccccCCHHHcCCCCcCchhhHHHHHHHHHHHHhCCCCccCCcccccccccccHHHHHHHHHhcCCCChHH
Confidence 234678999999999864 5889999999999999999999887532110000 0 000000
Q ss_pred -------------hhcccCC------------CCCchhHHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 014478 201 -------------MDSALEG------------HFSNDEGTELVRLASRCLQSEARERPNAKSLVIS 241 (424)
Q Consensus 201 -------------~~~~~~~------------~~~~~~~~~l~~li~~cl~~dp~~Rps~~~~~~~ 241 (424)
....... ......+.++.++|.+||+.||.+|||+++++++
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~t~~e~l~h 314 (317)
T cd07868 249 WEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQD 314 (317)
T ss_pred hHHHhhccchhhhhhhhhccccCcccccchHHhcCCCCChHHHHHHHHHhccCcccCCCHHHHhcC
Confidence 0000000 0001123468899999999999999999999864
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p |
| >cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-37 Score=286.73 Aligned_cols=236 Identities=14% Similarity=0.196 Sum_probs=185.2
Q ss_pred CCCcccceeee--ecceecccccCCCchhhhHHHHHHHHHhcC-CCcCcceeEEEEE-----eCCeeeEEEecCCCCCHH
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESSDLGETLNLEEAKAVGNL-RSERLANLIGCCY-----EADERLLVAEFMPNETLA 73 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~-----~~~~~~lv~e~~~~gsL~ 73 (424)
|++|.||++.. .+..+++|++.........+.+|+.+++.+ +||||+++++++. .+...++||||++|++|.
T Consensus 29 g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~ 108 (286)
T cd06638 29 GTYGKVFKVLNKKNGSKAAVKILDPIHDIDEEIEAEYNILKALSDHPNVVKFYGMYYKKDVKNGDQLWLVLELCNGGSVT 108 (286)
T ss_pred CCCcEEEEEEECCCCceeEEEeeccccchHHHHHHHHHHHHHHhcCCCeeeeeeeeeecccCCCCeEEEEEeecCCCCHH
Confidence 78999999877 456677777655444456788899999999 6999999999984 335689999999999999
Q ss_pred hHhccC--CCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCC----CccccC
Q 014478 74 KHLFHW--ETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG----KSYSTN 147 (424)
Q Consensus 74 ~~l~~~--~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~----~~~~gt 147 (424)
+++... ....+++..+..++.|++.||.|||+++ ++||||||+||+++.++.++|+|||+++..... ....|+
T Consensus 109 ~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~-i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~ 187 (286)
T cd06638 109 DLVKGFLKRGERMEEPIIAYILHEALMGLQHLHVNK-TIHRDVKGNNILLTTEGGVKLVDFGVSAQLTSTRLRRNTSVGT 187 (286)
T ss_pred HHHHHhhccCccccHHHHHHHHHHHHHHHHHHHhCC-ccccCCCHHhEEECCCCCEEEccCCceeecccCCCccccccCC
Confidence 987421 2456889999999999999999999999 999999999999999999999999998765432 234688
Q ss_pred ccCCCcccccc-----CCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhcc-cCCCCCchhHHHHHHHH
Q 014478 148 LAFTPPEYMRT-----GRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSA-LEGHFSNDEGTELVRLA 221 (424)
Q Consensus 148 ~~y~aPE~~~~-----~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~li 221 (424)
..|+|||.+.. ..++.++|||||||++|+|++|+.|+..... . .......... .....+..++.++.+++
T Consensus 188 ~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi~~el~~g~~p~~~~~~--~--~~~~~~~~~~~~~~~~~~~~~~~~~~li 263 (286)
T cd06638 188 PFWMAPEVIACEQQLDSTYDARCDVWSLGITAIELGDGDPPLADLHP--M--RALFKIPRNPPPTLHQPELWSNEFNDFI 263 (286)
T ss_pred CcccChhhhchhhhccccccchhhhhhHHHHHHHHhcCCCCCCCCch--h--HHHhhccccCCCcccCCCCcCHHHHHHH
Confidence 99999998853 3478899999999999999999987764311 0 1111111110 11112334567899999
Q ss_pred HHhcccCcCCCCCHHHHHHHH
Q 014478 222 SRCLQSEARERPNAKSLVISL 242 (424)
Q Consensus 222 ~~cl~~dp~~Rps~~~~~~~l 242 (424)
.+||+.||++|||+.++++++
T Consensus 264 ~~~l~~~p~~Rps~~ell~~~ 284 (286)
T cd06638 264 RKCLTKDYEKRPTVSDLLQHV 284 (286)
T ss_pred HHHccCCcccCCCHHHHhhcc
Confidence 999999999999999998764
|
Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear |
| >PHA03209 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-37 Score=296.28 Aligned_cols=232 Identities=13% Similarity=0.149 Sum_probs=178.2
Q ss_pred CCCcccceeeeec--ceecccccCCCchhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHhHhccC
Q 014478 2 GGRCSKFSICWFH--CHLKSSVLESSDLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHW 79 (424)
Q Consensus 2 G~~g~v~~~~~~~--~~v~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~ 79 (424)
|++|.||.+.+.+ ..+++|+... .....|+.++++++||||+++++++......++|||++. ++|.+++..
T Consensus 77 G~~g~Vy~~~~~~~~~~valK~~~~-----~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~-~~l~~~l~~- 149 (357)
T PHA03209 77 GSEGRVFVATKPGQPDPVVLKIGQK-----GTTLIEAMLLQNVNHPSVIRMKDTLVSGAITCMVLPHYS-SDLYTYLTK- 149 (357)
T ss_pred CCCeEEEEEEECCCCceEEEEeCCc-----cccHHHHHHHHhCCCCCCcChhheEEeCCeeEEEEEccC-CcHHHHHHh-
Confidence 8999999998844 4555554322 234569999999999999999999999999999999995 588888864
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCC---CccccCccCCCcccc
Q 014478 80 ETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG---KSYSTNLAFTPPEYM 156 (424)
Q Consensus 80 ~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~---~~~~gt~~y~aPE~~ 156 (424)
...++++.++..|+.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++..... ....||..|+|||++
T Consensus 150 ~~~~~~~~~~~~i~~qi~~aL~~LH~~~-ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~gt~~y~aPE~~ 228 (357)
T PHA03209 150 RSRPLPIDQALIIEKQILEGLRYLHAQR-IIHRDVKTENIFINDVDQVCIGDLGAAQFPVVAPAFLGLAGTVETNAPEVL 228 (357)
T ss_pred ccCCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCCHHHEEECCCCCEEEecCccccccccCcccccccccccccCCeec
Confidence 3567999999999999999999999999 999999999999999999999999998754322 235689999999999
Q ss_pred ccCCCCCCcceehhHHHHHHHhhCCCCCCchhh----HHH--hhhhhhHhhh------cccC------------------
Q 014478 157 RTGRVTPESVVYSFGTMLLDLLSGKHIPPSHAL----DLI--RSKNFLLLMD------SALE------------------ 206 (424)
Q Consensus 157 ~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~----~~~--~~~~~~~~~~------~~~~------------------ 206 (424)
.+..++.++|||||||++|||+++..++..... ... ....+...+. ....
T Consensus 229 ~~~~~~~~~DiwSlGvvl~ell~~~~~~f~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (357)
T PHA03209 229 ARDKYNSKADIWSAGIVLFEMLAYPSTIFEDPPSTPEEYVKSCHSHLLKIISTLKVHPEEFPRDPGSRLVRGFIEYASLE 308 (357)
T ss_pred CCCCCCchhhHHHHHHHHHHHHHcCCccccCCCCcHHHHHHHHHHHHHHHHHHhccChhhcCCCCccHHHHHHHhhcccC
Confidence 988899999999999999999987654422100 000 0000000000 0000
Q ss_pred -CC-------CCchhHHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 014478 207 -GH-------FSNDEGTELVRLASRCLQSEARERPNAKSLVIS 241 (424)
Q Consensus 207 -~~-------~~~~~~~~l~~li~~cl~~dp~~Rps~~~~~~~ 241 (424)
.. ....++.++.++|.+||+.||.+|||+.+++++
T Consensus 309 ~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rpta~e~l~h 351 (357)
T PHA03209 309 RQPYTRYPCFQRVNLPIDGEFLVHKMLTFDAAMRPSAEEILNY 351 (357)
T ss_pred CCcccccHHHhccCCCchHHHHHHHHHcCCcccCcCHHHHhcC
Confidence 00 001235567789999999999999999999875
|
|
| >cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-37 Score=284.54 Aligned_cols=235 Identities=14% Similarity=0.182 Sum_probs=187.5
Q ss_pred CCCcccceeee--ecceecccccCCCchhhhHHHHHHHHHhcC-CCcCcceeEEEEEeCC------eeeEEEecCCCCCH
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESSDLGETLNLEEAKAVGNL-RSERLANLIGCCYEAD------ERLLVAEFMPNETL 72 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~------~~~lv~e~~~~gsL 72 (424)
|++|.||.+.+ .+..++++++.......+.+.+|+.+++++ .|+||+++++++.... ..++||||+++++|
T Consensus 17 g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L 96 (275)
T cd06608 17 GTYGKVYKARHKKTGQLVAIKIMDIIEDEEEEIKEEYNILRKYSNHPNIATFYGAFIKKNPPGNDDQLWLVMELCGGGSV 96 (275)
T ss_pred CCCeEEEEEEECCCCcEEEEEEEecCchhHHHHHHHHHHHHHhcCCCChheEEEEEEecCCCCcceEEEEEEEcCCCCcH
Confidence 78899999988 445677777776666667899999999999 7999999999997644 47999999999999
Q ss_pred HhHhccCC--CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCC----Ccccc
Q 014478 73 AKHLFHWE--TQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG----KSYST 146 (424)
Q Consensus 73 ~~~l~~~~--~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~----~~~~g 146 (424)
.+++.... +..+++..+..++.|++.||.|||+++ ++|+||+|+||+++.++.++|+|||++...... ....+
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~~-i~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~ 175 (275)
T cd06608 97 TDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLHENK-VIHRDIKGQNILLTKNAEVKLVDFGVSAQLDSTLGRRNTFIG 175 (275)
T ss_pred HHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhcCC-cccCCCCHHHEEEccCCeEEECCCccceecccchhhhcCccc
Confidence 99886432 467899999999999999999999999 999999999999999999999999998754432 33457
Q ss_pred CccCCCcccccc-----CCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhccc-CCCCCchhHHHHHHH
Q 014478 147 NLAFTPPEYMRT-----GRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSAL-EGHFSNDEGTELVRL 220 (424)
Q Consensus 147 t~~y~aPE~~~~-----~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~l 220 (424)
+..|+|||.+.. ..++.++|||||||++|+|++|..||..... ............ ....+..++.++.++
T Consensus 176 ~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~l 251 (275)
T cd06608 176 TPYWMAPEVIACDEQPDASYDARSDVWSLGITAIELADGKPPLCDMHP----MRALFKIPRNPPPTLKSPENWSKKFNDF 251 (275)
T ss_pred cccccCHhHhcccccccCCccccccHHHhHHHHHHHHhCCCCccccch----HHHHHHhhccCCCCCCchhhcCHHHHHH
Confidence 889999998753 2467899999999999999999988754211 111111111111 111223367789999
Q ss_pred HHHhcccCcCCCCCHHHHHHH
Q 014478 221 ASRCLQSEARERPNAKSLVIS 241 (424)
Q Consensus 221 i~~cl~~dp~~Rps~~~~~~~ 241 (424)
+.+||..||++|||+.+++.+
T Consensus 252 i~~~l~~dp~~Rpt~~~ll~~ 272 (275)
T cd06608 252 ISECLIKNYEQRPFMEELLEH 272 (275)
T ss_pred HHHHhhcChhhCcCHHHHhcC
Confidence 999999999999999999854
|
Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I |
| >cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-37 Score=281.84 Aligned_cols=233 Identities=19% Similarity=0.219 Sum_probs=191.4
Q ss_pred CCCcccceeee--ecceecccccCCCc------hhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHH
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESSD------LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLA 73 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~~------~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~ 73 (424)
|++|.||.+.+ .+..+++|.+.... ...+.+.+|+.+++.++|+||+++++++..+...+++|||+++++|.
T Consensus 11 g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~ 90 (258)
T cd06632 11 GSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYLGTEREEDNLYIFLELVPGGSLA 90 (258)
T ss_pred cCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCchheeeeEecCCeEEEEEEecCCCcHH
Confidence 88999999988 46677777664332 23567889999999999999999999999999999999999999999
Q ss_pred hHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCC---CccccCccC
Q 014478 74 KHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG---KSYSTNLAF 150 (424)
Q Consensus 74 ~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~---~~~~gt~~y 150 (424)
+++.+ ...+++..+..++.|++.||.|||+.+ ++|+||+|+||+++.++.+||+|||++...... ....++..|
T Consensus 91 ~~~~~--~~~~~~~~~~~~~~~i~~~l~~lH~~~-i~H~dl~~~ni~~~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~y 167 (258)
T cd06632 91 KLLKK--YGSFPEPVIRLYTRQILLGLEYLHDRN-TVHRDIKGANILVDTNGVVKLADFGMAKQVVEFSFAKSFKGSPYW 167 (258)
T ss_pred HHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCCHHHEEECCCCCEEEccCccceeccccccccccCCCcce
Confidence 99964 346899999999999999999999999 999999999999999999999999998765432 345578899
Q ss_pred CCccccccCC-CCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHHHHHHHHHhcccCc
Q 014478 151 TPPEYMRTGR-VTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEA 229 (424)
Q Consensus 151 ~aPE~~~~~~-~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp 229 (424)
++||.+.... ++.++|+||||+++|+|++|+.||..... ................+..+++.+.+++.+||..+|
T Consensus 168 ~~pe~~~~~~~~~~~~D~~slG~~l~~l~~g~~pf~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p 243 (258)
T cd06632 168 MAPEVIAQQGGYGLAADIWSLGCTVLEMATGKPPWSQLEG----VAAVFKIGRSKELPPIPDHLSDEAKDFILKCLQRDP 243 (258)
T ss_pred eCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcccCcH----HHHHHHHHhcccCCCcCCCcCHHHHHHHHHHhhcCc
Confidence 9999988666 89999999999999999999988755321 111111111122234455678899999999999999
Q ss_pred CCCCCHHHHHHH
Q 014478 230 RERPNAKSLVIS 241 (424)
Q Consensus 230 ~~Rps~~~~~~~ 241 (424)
++||++.+++.+
T Consensus 244 ~~Rp~~~~~l~~ 255 (258)
T cd06632 244 SLRPTAAELLEH 255 (258)
T ss_pred ccCcCHHHHhcC
Confidence 999999999854
|
Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops |
| >cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-37 Score=290.16 Aligned_cols=232 Identities=19% Similarity=0.222 Sum_probs=189.2
Q ss_pred CCCcccceeee--ecceecccccCCCc-hhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHhHhcc
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESSD-LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFH 78 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~ 78 (424)
|++|.||.+.. .+..+++|++.... ...+.+.+|+.+++.++||||+++++++..++..++||||+++++|..++.
T Consensus 32 g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~iv~e~~~~~~L~~~~~- 110 (297)
T cd06659 32 GSTGIVCIAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHQNVVEMYKSYLVGEELWVLMEFLQGGALTDIVS- 110 (297)
T ss_pred CCceeEEEEEEcCCCCEEEEEEEEecccchHHHHHHHHHHHHhCCCCchhhhhhheeeCCeEEEEEecCCCCCHHHHHh-
Confidence 88999998876 46677777764322 335678899999999999999999999999999999999999999999874
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCC----CccccCccCCCcc
Q 014478 79 WETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG----KSYSTNLAFTPPE 154 (424)
Q Consensus 79 ~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~----~~~~gt~~y~aPE 154 (424)
...+++.+++.++.|++.||.|||+++ ++||||||+||+++.++.+||+|||++...... ....++..|+|||
T Consensus 111 --~~~~~~~~~~~~~~qi~~~L~~LH~~~-ivH~dl~p~Nill~~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~y~aPE 187 (297)
T cd06659 111 --QTRLNEEQIATVCESVLQALCYLHSQG-VIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKRKSLVGTPYWMAPE 187 (297)
T ss_pred --hcCCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCCHHHeEEccCCcEEEeechhHhhcccccccccceecCccccCHH
Confidence 356899999999999999999999999 999999999999999999999999998754322 2346789999999
Q ss_pred ccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhh-cccCCCCCchhHHHHHHHHHHhcccCcCCCC
Q 014478 155 YMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMD-SALEGHFSNDEGTELVRLASRCLQSEARERP 233 (424)
Q Consensus 155 ~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rp 233 (424)
++.+..++.++|||||||++|||++|+.||....... ....... ...........+..+.+++.+||+.+|++||
T Consensus 188 ~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~l~~~P~~Rp 263 (297)
T cd06659 188 VISRTPYGTEVDIWSLGIMVIEMVDGEPPYFSDSPVQ----AMKRLRDSPPPKLKNAHKISPVLRDFLERMLTREPQERA 263 (297)
T ss_pred HHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH----HHHHHhccCCCCccccCCCCHHHHHHHHHHhcCCcccCc
Confidence 9998889999999999999999999998875431111 0111100 0111112334577899999999999999999
Q ss_pred CHHHHHHH
Q 014478 234 NAKSLVIS 241 (424)
Q Consensus 234 s~~~~~~~ 241 (424)
++.+++.+
T Consensus 264 s~~~ll~~ 271 (297)
T cd06659 264 TAQELLDH 271 (297)
T ss_pred CHHHHhhC
Confidence 99999976
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i |
| >KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.9e-38 Score=289.66 Aligned_cols=233 Identities=18% Similarity=0.239 Sum_probs=182.7
Q ss_pred CCCcccceeeeecce-ecc---cccCCCchhhhHHHHHHHHHhcC-CCcCcceeEEEEEeCCeeeEEEecCCCCCHHhHh
Q 014478 2 GGRCSKFSICWFHCH-LKS---SVLESSDLGETLNLEEAKAVGNL-RSERLANLIGCCYEADERLLVAEFMPNETLAKHL 76 (424)
Q Consensus 2 G~~g~v~~~~~~~~~-v~~---~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~l 76 (424)
||+..||++..-++. ++. +....+.....-|.+|+..|.+| .|.+|+++++|-..++.+|||||+-+. +|..+|
T Consensus 372 GGSSkV~kV~~s~~~iyalkkv~~~~~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv~d~~lYmvmE~Gd~-DL~kiL 450 (677)
T KOG0596|consen 372 GGSSKVFKVLNSDKQIYALKKVVLLEADNQTLDGYRNEIALLNKLKGHDKIIQLYDYEVTDGYLYMVMECGDI-DLNKIL 450 (677)
T ss_pred CCcceeeeeecCCCcchhhhHHHHhhcCHHHHHHHHHHHHHHHHhcCCceEEEEeeeeccCceEEEEeecccc-cHHHHH
Confidence 899999998874333 222 23345566688999999999999 599999999999999999999999865 999999
Q ss_pred ccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCC------CccccCccC
Q 014478 77 FHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG------KSYSTNLAF 150 (424)
Q Consensus 77 ~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~------~~~~gt~~y 150 (424)
.........| .+..+..|++.++.++|+.| |||.||||.|+|+- .|.+||+|||+|..+... .++.||+.|
T Consensus 451 ~k~~~~~~~~-~lk~ywkqML~aV~~IH~~g-IVHSDLKPANFLlV-kG~LKLIDFGIA~aI~~DTTsI~kdsQvGT~NY 527 (677)
T KOG0596|consen 451 KKKKSIDPDW-FLKFYWKQMLLAVKTIHQHG-IVHSDLKPANFLLV-KGRLKLIDFGIANAIQPDTTSIVKDSQVGTVNY 527 (677)
T ss_pred HhccCCCchH-HHHHHHHHHHHHHHHHHHhc-eeecCCCcccEEEE-eeeEEeeeechhcccCccccceeeccccCcccc
Confidence 7643333334 78889999999999999999 99999999999997 678999999999877654 356899999
Q ss_pred CCccccccC-----------CCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhcccCCCCCchh-HHHHH
Q 014478 151 TPPEYMRTG-----------RVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDE-GTELV 218 (424)
Q Consensus 151 ~aPE~~~~~-----------~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~ 218 (424)
|+||.+... +++.+||||||||+||+|+.|+.||..- ...+ ..+..+.++...-++|.-- ..++.
T Consensus 528 MsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMvYgktPf~~~-~n~~--aKl~aI~~P~~~Iefp~~~~~~~li 604 (677)
T KOG0596|consen 528 MSPEALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMVYGKTPFGQI-INQI--AKLHAITDPNHEIEFPDIPENDELI 604 (677)
T ss_pred cCHHHHhhccccccCCCcceeecCccchhhhhhHHHHHHhcCCchHHH-HHHH--HHHHhhcCCCccccccCCCCchHHH
Confidence 999987632 3678999999999999999999776531 1122 2233344443322333321 23399
Q ss_pred HHHHHhcccCcCCCCCHHHHHHH
Q 014478 219 RLASRCLQSEARERPNAKSLVIS 241 (424)
Q Consensus 219 ~li~~cl~~dp~~Rps~~~~~~~ 241 (424)
++++.||..||.+|||+.+++++
T Consensus 605 ~~mK~CL~rdPkkR~si~eLLqh 627 (677)
T KOG0596|consen 605 DVMKCCLARDPKKRWSIPELLQH 627 (677)
T ss_pred HHHHHHHhcCcccCCCcHHHhcC
Confidence 99999999999999999999855
|
|
| >PTZ00284 protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.1e-38 Score=308.49 Aligned_cols=236 Identities=15% Similarity=0.127 Sum_probs=178.2
Q ss_pred CCCcccceeee--ecceecccccCCCchhhhHHHHHHHHHhcCCC------cCcceeEEEEEeC-CeeeEEEecCCCCCH
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESSDLGETLNLEEAKAVGNLRS------ERLANLIGCCYEA-DERLLVAEFMPNETL 72 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~~~~~~~~~~E~~~l~~l~h------~~iv~~~~~~~~~-~~~~lv~e~~~~gsL 72 (424)
|+||.||++.+ .+..|++|++.........+..|++++..++| .+|+++++++... ...++|||++ |++|
T Consensus 140 G~fg~V~~a~~~~~~~~vAvK~i~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~~~~~~~~~iv~~~~-g~~l 218 (467)
T PTZ00284 140 GTFGKVVEAWDRKRKEYCAVKIVRNVPKYTRDAKIEIQFMEKVRQADPADRFPLMKIQRYFQNETGHMCIVMPKY-GPCL 218 (467)
T ss_pred ccCEEEEEEEEcCCCeEEEEEEEecchhhHHHHHHHHHHHHHHhhcCcccCcceeeeEEEEEcCCceEEEEEecc-CCCH
Confidence 89999999987 45668888876544444556667777777654 4588898988764 4688999998 7799
Q ss_pred HhHhccCCCCCCCHHHHHHHHHHHHHHHHHHHh-CCCcccccCCCCCeeecCCC----------------CeEEcccccc
Q 014478 73 AKHLFHWETQPMKWAMRLRVALYLAQALEYCSS-KGRALYHDLNAYRILFDKDG----------------NPRLSSFGLM 135 (424)
Q Consensus 73 ~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~-~~~ivH~dikp~Nill~~~~----------------~~kl~Dfg~~ 135 (424)
.+++.+ .+.+++..+..++.||+.||.|||+ .+ ||||||||+|||++.++ .+||+|||.+
T Consensus 219 ~~~l~~--~~~l~~~~~~~i~~qi~~aL~yLH~~~g-IiHrDlKP~NILl~~~~~~~~~~~~~~~~~~~~~vkl~DfG~~ 295 (467)
T PTZ00284 219 LDWIMK--HGPFSHRHLAQIIFQTGVALDYFHTELH-LMHTDLKPENILMETSDTVVDPVTNRALPPDPCRVRICDLGGC 295 (467)
T ss_pred HHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHhcCC-eecCCCCHHHEEEecCCcccccccccccCCCCceEEECCCCcc
Confidence 998864 4679999999999999999999998 48 99999999999998765 4999999987
Q ss_pred ccCCCC-CccccCccCCCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhh----------h-------
Q 014478 136 KNSRDG-KSYSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKN----------F------- 197 (424)
Q Consensus 136 ~~~~~~-~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~----------~------- 197 (424)
...... ....||+.|+|||++.+..++.++|||||||++|||++|+.||............ +
T Consensus 296 ~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~g~~p~~~~~~~~~~ 375 (467)
T PTZ00284 296 CDERHSRTAIVSTRHYRSPEVVLGLGWMYSTDMWSMGCIIYELYTGKLLYDTHDNLEHLHLMEKTLGRLPSEWAGRCGTE 375 (467)
T ss_pred ccCccccccccCCccccCcHHhhcCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCHHHHhhccch
Confidence 654332 3467899999999999889999999999999999999999888653211000000 0
Q ss_pred --hHhhhc--ccCCCC-C--------------chhHHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 014478 198 --LLLMDS--ALEGHF-S--------------NDEGTELVRLASRCLQSEARERPNAKSLVIS 241 (424)
Q Consensus 198 --~~~~~~--~~~~~~-~--------------~~~~~~l~~li~~cl~~dp~~Rps~~~~~~~ 241 (424)
..+... ...... + ....+.+.+||.+||..||.+|||++++++|
T Consensus 376 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~ta~e~L~H 438 (467)
T PTZ00284 376 EARLLYNSAGQLRPCTDPKHLARIARARPVREVIRDDLLCDLIYGLLHYDRQKRLNARQMTTH 438 (467)
T ss_pred hHHHHhhhcccccccCCHHHHHhhhcccchhhhhchHHHHHHHHHhCCcChhhCCCHHHHhcC
Confidence 000000 000000 0 0113567899999999999999999999976
|
|
| >cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-37 Score=296.63 Aligned_cols=234 Identities=19% Similarity=0.235 Sum_probs=182.2
Q ss_pred CCCcccceeee--ecceecccccCCCc---hhhhHHHHHHHHHhcCCCcCcceeEEEEEeC------CeeeEEEecCCCC
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESSD---LGETLNLEEAKAVGNLRSERLANLIGCCYEA------DERLLVAEFMPNE 70 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~~---~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~------~~~~lv~e~~~~g 70 (424)
|+||.||.+.. .+..+++|++.... .....+.+|+++++.++||||+++++++... ...+++|+++ ++
T Consensus 26 G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 104 (343)
T cd07878 26 GAYGSVCSAYDTRLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHMKHENVIGLLDVFTPATSIENFNEVYLVTNLM-GA 104 (343)
T ss_pred CCCeEEEEEEECCCCCEEEEEEeCchhhhhHHHHHHHHHHHHHHhcCCCchhhhhhhhcccccccccCcEEEEeecC-CC
Confidence 89999999987 45667878775432 2345677899999999999999999988643 3468999998 77
Q ss_pred CHHhHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCC-CccccCcc
Q 014478 71 TLAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG-KSYSTNLA 149 (424)
Q Consensus 71 sL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~-~~~~gt~~ 149 (424)
+|.+++. ...+++..+..++.|++.||.|||+++ |+||||||+||+++.++.+||+|||+++..... ....||..
T Consensus 105 ~l~~~~~---~~~l~~~~~~~i~~qi~~aL~~LH~~~-ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~t~~ 180 (343)
T cd07878 105 DLNNIVK---CQKLSDEHVQFLIYQLLRGLKYIHSAG-IIHRDLKPSNVAVNEDCELRILDFGLARQADDEMTGYVATRW 180 (343)
T ss_pred CHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCC-eecccCChhhEEECCCCCEEEcCCccceecCCCcCCcccccc
Confidence 9998884 457999999999999999999999999 999999999999999999999999999875543 34568999
Q ss_pred CCCcccccc-CCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhh-------------------hhHhhhcccCCC-
Q 014478 150 FTPPEYMRT-GRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKN-------------------FLLLMDSALEGH- 208 (424)
Q Consensus 150 y~aPE~~~~-~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~-------------------~~~~~~~~~~~~- 208 (424)
|+|||++.+ ..++.++|||||||++|+|++|+.||+.......-... ....... ....
T Consensus 181 y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 259 (343)
T cd07878 181 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLKGKALFPGNDYIDQLKRIMEVVGTPSPEVLKKISSEHARKYIQS-LPHMP 259 (343)
T ss_pred ccCchHhcCCccCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhcchhhHHHHhhc-ccccc
Confidence 999999876 46889999999999999999999888653211000000 0000000 0000
Q ss_pred ------CCchhHHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 014478 209 ------FSNDEGTELVRLASRCLQSEARERPNAKSLVIS 241 (424)
Q Consensus 209 ------~~~~~~~~l~~li~~cl~~dp~~Rps~~~~~~~ 241 (424)
.....++.+.+++.+||..||.+|||+.+++.+
T Consensus 260 ~~~~~~~~~~~~~~~~~li~~mL~~dp~~R~s~~ell~h 298 (343)
T cd07878 260 QQDLKKIFRGANPLAIDLLEKMLVLDSDKRISASEALAH 298 (343)
T ss_pred chhHHHhccCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 001234568899999999999999999999975
|
Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is |
| >cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.8e-37 Score=284.58 Aligned_cols=234 Identities=18% Similarity=0.256 Sum_probs=191.8
Q ss_pred CCCcccceeeee--cceecccccCCCchhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHhHhccC
Q 014478 2 GGRCSKFSICWF--HCHLKSSVLESSDLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHW 79 (424)
Q Consensus 2 G~~g~v~~~~~~--~~~v~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~ 79 (424)
|++|.||.+.+. +..+++|++.........+.+|+++++.++|+||+++++++......++|+||+++++|.+++...
T Consensus 30 g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~ 109 (286)
T cd06614 30 GASGEVYKATDRATGKEVAIKKMRLRKQNKELIINEILIMKDCKHPNIVDYYDSYLVGDELWVVMEYMDGGSLTDIITQN 109 (286)
T ss_pred CCCeEEEEEEEccCCcEEEEEEEecCchhHHHHHHHHHHHHHCCCCCeeEEEEEEEECCEEEEEEeccCCCcHHHHHHHh
Confidence 789999999885 666777777655545678889999999999999999999999999999999999999999999752
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCC----CccccCccCCCccc
Q 014478 80 ETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG----KSYSTNLAFTPPEY 155 (424)
Q Consensus 80 ~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~----~~~~gt~~y~aPE~ 155 (424)
...+++..+..++.|++.||.|||+.+ ++|+||+|+||+++.++.++|+|||++...... ....++..|++||.
T Consensus 110 -~~~l~~~~~~~i~~~i~~~L~~lH~~g-i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~y~~PE~ 187 (286)
T cd06614 110 -FVRMNEPQIAYVCREVLQGLEYLHSQN-VIHRDIKSDNILLSKDGSVKLADFGFAAQLTKEKSKRNSVVGTPYWMAPEV 187 (286)
T ss_pred -ccCCCHHHHHHHHHHHHHHHHHHHhCC-eeeCCCChhhEEEcCCCCEEECccchhhhhccchhhhccccCCcccCCHhH
Confidence 237999999999999999999999999 999999999999999999999999987654432 23457789999999
Q ss_pred cccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhccc-CCCCCchhHHHHHHHHHHhcccCcCCCCC
Q 014478 156 MRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSAL-EGHFSNDEGTELVRLASRCLQSEARERPN 234 (424)
Q Consensus 156 ~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~li~~cl~~dp~~Rps 234 (424)
+.+..++.++|+||||+++|+|++|..|+....... .......... ....+..++.++.++|.+||+.+|.+|||
T Consensus 188 ~~~~~~~~~~Dv~slGvil~~l~~g~~p~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt 263 (286)
T cd06614 188 IKRKDYGPKVDIWSLGIMCIEMAEGEPPYLREPPLR----ALFLITTKGIPPLKNPEKWSPEFKDFLNKCLVKDPEKRPS 263 (286)
T ss_pred hcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCHHH----HHHHHHhcCCCCCcchhhCCHHHHHHHHHHhccChhhCcC
Confidence 988889999999999999999999997765431111 1111111111 11122236788999999999999999999
Q ss_pred HHHHHHH
Q 014478 235 AKSLVIS 241 (424)
Q Consensus 235 ~~~~~~~ 241 (424)
+.+++.+
T Consensus 264 ~~~il~~ 270 (286)
T cd06614 264 AEELLQH 270 (286)
T ss_pred HHHHhhC
Confidence 9999865
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou |
| >cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.8e-37 Score=281.98 Aligned_cols=238 Identities=18% Similarity=0.231 Sum_probs=186.8
Q ss_pred CCCcccceeeee-----cceecccccCCC---chhhhHHHHHHHHHhcCCCcCcceeEEEEEeCC------eeeEEEecC
Q 014478 2 GGRCSKFSICWF-----HCHLKSSVLESS---DLGETLNLEEAKAVGNLRSERLANLIGCCYEAD------ERLLVAEFM 67 (424)
Q Consensus 2 G~~g~v~~~~~~-----~~~v~~~~~~~~---~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~------~~~lv~e~~ 67 (424)
||+|.||.+.+. +..+++|++... ....+.+.+|+++++.++||||+++++++.... ..+++++|+
T Consensus 10 g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (273)
T cd05074 10 GEFGSVREAQLKSEDGSFQKVAVKMLKADIFSSSDIEEFLREAACMKEFDHPNVIKLIGVSLRSRAKGRLPIPMVILPFM 89 (273)
T ss_pred CCCCCEEeeEeeccCCCceEEEEEEeccccCChHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCCCCcccceEEEEecC
Confidence 899999999863 356777766543 234567889999999999999999999986542 246899999
Q ss_pred CCCCHHhHhccC----CCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCCC-
Q 014478 68 PNETLAKHLFHW----ETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGK- 142 (424)
Q Consensus 68 ~~gsL~~~l~~~----~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~~- 142 (424)
++|+|.+++... ....+++..+..++.|++.||.|||+++ ++||||||+||+++.++.+||+|||+++......
T Consensus 90 ~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~-i~H~dikp~nili~~~~~~kl~dfg~~~~~~~~~~ 168 (273)
T cd05074 90 KHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLSSKN-FIHRDLAARNCMLNENMTVCVADFGLSKKIYSGDY 168 (273)
T ss_pred CCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhCC-EeecccchhhEEEcCCCCEEECcccccccccCCcc
Confidence 999999887421 1235789999999999999999999999 9999999999999999999999999988654321
Q ss_pred -----ccccCccCCCccccccCCCCCCcceehhHHHHHHHhh-CCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHH
Q 014478 143 -----SYSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTE 216 (424)
Q Consensus 143 -----~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (424)
...++..|++||.+.+..++.++|||||||++|+|++ |+.|+..... ......+........+...+..
T Consensus 169 ~~~~~~~~~~~~~~~pe~~~~~~~~~~sDi~slG~il~el~~~g~~p~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~ 243 (273)
T cd05074 169 YRQGCASKLPVKWLALESLADNVYTTHSDVWAFGVTMWEIMTRGQTPYAGVEN-----SEIYNYLIKGNRLKQPPDCLED 243 (273)
T ss_pred eecCCCccCchhhcCHhHHhcCccchhhhhHHHHHHHHHHhhCCCCCCCCCCH-----HHHHHHHHcCCcCCCCCCCCHH
Confidence 2234578999999998889999999999999999999 7766654311 1111111111122233456789
Q ss_pred HHHHHHHhcccCcCCCCCHHHHHHHHHHH
Q 014478 217 LVRLASRCLQSEARERPNAKSLVISLMSL 245 (424)
Q Consensus 217 l~~li~~cl~~dp~~Rps~~~~~~~l~~~ 245 (424)
+.+++.+||..+|++|||+.+++..|+.+
T Consensus 244 ~~~l~~~~l~~~p~~Rps~~~~~~~l~~~ 272 (273)
T cd05074 244 VYELMCQCWSPEPKCRPSFQHLRDQLELI 272 (273)
T ss_pred HHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 99999999999999999999999998764
|
Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac |
| >cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-37 Score=282.13 Aligned_cols=237 Identities=16% Similarity=0.229 Sum_probs=187.6
Q ss_pred CCCcccceeeeec---ceecccccCC-----------CchhhhHHHHHHHHHhc-CCCcCcceeEEEEEeCCeeeEEEec
Q 014478 2 GGRCSKFSICWFH---CHLKSSVLES-----------SDLGETLNLEEAKAVGN-LRSERLANLIGCCYEADERLLVAEF 66 (424)
Q Consensus 2 G~~g~v~~~~~~~---~~v~~~~~~~-----------~~~~~~~~~~E~~~l~~-l~h~~iv~~~~~~~~~~~~~lv~e~ 66 (424)
|++|.||.+.+.. ..+++|.+.. .......+.+|+.++.+ ++||||+++++++..++..++||||
T Consensus 11 G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~ 90 (269)
T cd08528 11 GAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTFLENDRLYIVMDL 90 (269)
T ss_pred CCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeEccCCeEEEEEec
Confidence 8899999999844 5566565431 11234567789988875 6999999999999999999999999
Q ss_pred CCCCCHHhHhcc--CCCCCCCHHHHHHHHHHHHHHHHHHHh-CCCcccccCCCCCeeecCCCCeEEccccccccCCCC--
Q 014478 67 MPNETLAKHLFH--WETQPMKWAMRLRVALYLAQALEYCSS-KGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG-- 141 (424)
Q Consensus 67 ~~~gsL~~~l~~--~~~~~l~~~~~~~i~~qi~~~L~~lH~-~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~-- 141 (424)
++|++|.+++.. .....+++..++.++.|++.||.|||+ .+ ++|+||+|+||+++.++.++|+|||++......
T Consensus 91 ~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~-i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~ 169 (269)
T cd08528 91 IEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHKEKR-IVHRDLTPNNIMLGEDDKVTITDFGLAKQKQPESK 169 (269)
T ss_pred CCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhccCCc-eeecCCCHHHEEECCCCcEEEecccceeecccccc
Confidence 999999998743 134578999999999999999999996 67 999999999999999999999999998865543
Q ss_pred -CccccCccCCCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHHHHHH
Q 014478 142 -KSYSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRL 220 (424)
Q Consensus 142 -~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 220 (424)
....++..|++||.+.++.++.++|+||||+++|+|++|..|+........ .................++++.++
T Consensus 170 ~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~ll~~l~~g~~p~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~l~~l 245 (269)
T cd08528 170 LTSVVGTILYSCPEIVKNEPYGEKADVWAFGCILYQMCTLQPPFYSTNMLSL----ATKIVEAVYEPLPEGMYSEDVTDV 245 (269)
T ss_pred cccccCcccCcChhhhcCCCCchHHHHHHHHHHHHHHHhCCCcccccCHHHH----HHHHhhccCCcCCcccCCHHHHHH
Confidence 234678899999999988899999999999999999999977654311111 111111111111222457889999
Q ss_pred HHHhcccCcCCCCCHHHHHHHHH
Q 014478 221 ASRCLQSEARERPNAKSLVISLM 243 (424)
Q Consensus 221 i~~cl~~dp~~Rps~~~~~~~l~ 243 (424)
+.+||+.||++||++.++.+++.
T Consensus 246 i~~cl~~~p~~Rp~~~e~~~~~~ 268 (269)
T cd08528 246 ITSCLTPDAEARPDIIQVSAMIS 268 (269)
T ss_pred HHHHCCCCCccCCCHHHHHHHhc
Confidence 99999999999999999998864
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24. |
| >cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-37 Score=281.89 Aligned_cols=234 Identities=16% Similarity=0.198 Sum_probs=192.0
Q ss_pred CCCcccceeee--ecceecccccCCC---chhhhHHHHHHHHHhcCCCcCcceeEEEEEe--CCeeeEEEecCCCCCHHh
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESS---DLGETLNLEEAKAVGNLRSERLANLIGCCYE--ADERLLVAEFMPNETLAK 74 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~---~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~--~~~~~lv~e~~~~gsL~~ 74 (424)
|++|.||++.+ .+..++++++..+ ....+.+..|+++++.++||||+++++++.. +...+++|||+++++|.+
T Consensus 11 g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~e~~~~~~L~~ 90 (265)
T cd08217 11 GSFGTVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLVSEVNILRELKHPNIVRYYDRIIDRSNQTLYIVMEYCEGGDLAQ 90 (265)
T ss_pred CCCeEEEEeeecCCCCEEEEEEEecccCCHHHHHHHHHHHHHHHhcCCCccceeeeeeecCCCCEEEEEehhccCCCHHH
Confidence 78999999876 4556666666432 3345678899999999999999999998764 345789999999999999
Q ss_pred HhccC--CCCCCCHHHHHHHHHHHHHHHHHHH-----hCCCcccccCCCCCeeecCCCCeEEccccccccCCCCC----c
Q 014478 75 HLFHW--ETQPMKWAMRLRVALYLAQALEYCS-----SKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGK----S 143 (424)
Q Consensus 75 ~l~~~--~~~~l~~~~~~~i~~qi~~~L~~lH-----~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~~----~ 143 (424)
++... ...++++..++.++.|++.||.||| +.+ ++|+||||+||+++.++.+||+|||++....... .
T Consensus 91 ~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~~-i~h~dl~p~nili~~~~~~kl~d~g~~~~~~~~~~~~~~ 169 (265)
T cd08217 91 LIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDPGNT-VLHRDLKPANIFLDANNNVKLGDFGLAKILGHDSSFAKT 169 (265)
T ss_pred HHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcCccccCc-ceecCCCHHHEEEecCCCEEEecccccccccCCcccccc
Confidence 98642 2457899999999999999999999 888 9999999999999999999999999988765433 3
Q ss_pred cccCccCCCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHHHHHHHHH
Q 014478 144 YSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASR 223 (424)
Q Consensus 144 ~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 223 (424)
..++..|+|||.+.+..++.++|+||||+++|+|++|..|+..... ......+........+...+.++.+++.+
T Consensus 170 ~~~~~~~~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 244 (265)
T cd08217 170 YVGTPYYMSPEQLNHMSYDEKSDIWSLGCLIYELCALSPPFTARNQ-----LQLASKIKEGKFRRIPYRYSSELNEVIKS 244 (265)
T ss_pred cccCCCccChhhhcCCCCCchhHHHHHHHHHHHHHHCCCcccCcCH-----HHHHHHHhcCCCCCCccccCHHHHHHHHH
Confidence 4678999999999988899999999999999999999988765421 11222222333334566778899999999
Q ss_pred hcccCcCCCCCHHHHHHH
Q 014478 224 CLQSEARERPNAKSLVIS 241 (424)
Q Consensus 224 cl~~dp~~Rps~~~~~~~ 241 (424)
||..+|++||++.+|+++
T Consensus 245 ~l~~~p~~Rp~~~~il~~ 262 (265)
T cd08217 245 MLNVDPDKRPSTEELLQL 262 (265)
T ss_pred HccCCcccCCCHHHHhhC
Confidence 999999999999999865
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi |
| >KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-39 Score=323.95 Aligned_cols=232 Identities=17% Similarity=0.225 Sum_probs=190.2
Q ss_pred CCCcccceeee--ecceecccccCCCc---hhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHhHh
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESSD---LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHL 76 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~~---~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~l 76 (424)
|-||.||.++. .|.-.++|-+...+ .......+|..++..++|||+|+++|+-.+++..+|.||||+||+|.+.+
T Consensus 1246 G~fG~VYtavN~~tGellAvKEI~iq~~~~k~~~~i~eEm~vlE~lnHpNlV~YyGVEvHRekv~IFMEyC~~GsLa~ll 1325 (1509)
T KOG4645|consen 1246 GTFGKVYTAVNLDTGELLAVKEIKIQDSDHKTFKLIAEEMKVLEGLNHPNLVRYYGVEVHREKVYIFMEYCEGGSLASLL 1325 (1509)
T ss_pred cceeeeEEeecCCccchhhhhhhhcCccccccCcchHHHHHHHHhccCccccccCceeecHHHHHHHHHHhccCcHHHHH
Confidence 56789998887 45555665543333 33456778999999999999999999999999999999999999999999
Q ss_pred ccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCC--------CccccCc
Q 014478 77 FHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG--------KSYSTNL 148 (424)
Q Consensus 77 ~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~--------~~~~gt~ 148 (424)
.+ ++-.++.-...+-.|++.|+.|||+.| ||||||||+||+++.+|.+|++|||.|..+... ....||+
T Consensus 1326 ~~--gri~dE~vt~vyt~qll~gla~LH~~g-IVHRDIK~aNI~Ld~~g~iK~~DFGsa~ki~~~~~~~~~el~~~~GT~ 1402 (1509)
T KOG4645|consen 1326 EH--GRIEDEMVTRVYTKQLLEGLAYLHEHG-IVHRDIKPANILLDFNGLIKYGDFGSAVKIKNNAQTMPGELQSMMGTP 1402 (1509)
T ss_pred Hh--cchhhhhHHHHHHHHHHHHHHHHHhcC-ceecCCCccceeeecCCcEEeecccceeEecCchhcCCHHHHhhcCCc
Confidence 75 445666667778899999999999999 999999999999999999999999998876543 2457999
Q ss_pred cCCCccccccCC---CCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhh-hhhHhhhcccCCCCCchhHHHHHHHHHHh
Q 014478 149 AFTPPEYMRTGR---VTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSK-NFLLLMDSALEGHFSNDEGTELVRLASRC 224 (424)
Q Consensus 149 ~y~aPE~~~~~~---~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~li~~c 224 (424)
.|||||++.+.. -..+.||||||||+.||+||+.||... +.+ .+..-+.-...+++|..++++-++||++|
T Consensus 1403 ~YMAPEvit~t~~kG~~~A~DiWslGCVVlEM~tGkrPW~~~-----dne~aIMy~V~~gh~Pq~P~~ls~~g~dFle~C 1477 (1509)
T KOG4645|consen 1403 MYMAPEVITGTKGKGHGGAADIWSLGCVVLEMATGKRPWAEL-----DNEWAIMYHVAAGHKPQIPERLSSEGRDFLEHC 1477 (1509)
T ss_pred hhcCchhhcccccCCCCcchhhhcccceEEEeecCCCchhhc-----cchhHHHhHHhccCCCCCchhhhHhHHHHHHHH
Confidence 999999998643 455899999999999999999887642 111 11122333445677888999999999999
Q ss_pred cccCcCCCCCHHHHHHH
Q 014478 225 LQSEARERPNAKSLVIS 241 (424)
Q Consensus 225 l~~dp~~Rps~~~~~~~ 241 (424)
|..||.+|.++.+++++
T Consensus 1478 l~~dP~~Rw~~~qlle~ 1494 (1509)
T KOG4645|consen 1478 LEQDPKMRWTASQLLEH 1494 (1509)
T ss_pred HhcCchhhhHHHHHHHh
Confidence 99999999999888865
|
|
| >cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-37 Score=287.86 Aligned_cols=234 Identities=15% Similarity=0.125 Sum_probs=185.4
Q ss_pred CCCcccceeee--ecceecccccCCCc----hhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHhH
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESSD----LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKH 75 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~~----~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~ 75 (424)
|++|.||.+.+ .+..+++|.+.... .....+.+|+++++.++||||+++++.+..++..++||||++|++|.++
T Consensus 12 g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~g~~L~~~ 91 (305)
T cd05609 12 GAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFAENPFVVSMFCSFETKRHLCMVMEYVEGGDCATL 91 (305)
T ss_pred CCCeeEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEecCCEEEEEEecCCCCcHHHH
Confidence 88999998887 34567777665432 2345788999999999999999999999999999999999999999999
Q ss_pred hccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCC---------------
Q 014478 76 LFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRD--------------- 140 (424)
Q Consensus 76 l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~--------------- 140 (424)
+.. ...+++..+..++.|++.||.|||+++ ++||||||+||+++.++.++|+|||+++....
T Consensus 92 l~~--~~~~~~~~~~~~~~~i~~~l~~lH~~~-i~H~dl~p~NIll~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~ 168 (305)
T cd05609 92 LKN--IGALPVDMARMYFAETVLALEYLHNYG-IVHRDLKPDNLLITSMGHIKLTDFGLSKIGLMSLTTNLYEGHIEKDT 168 (305)
T ss_pred HHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-ccccCCchHHEEECCCCCEEEeeCCCccccCcCccccccccccccch
Confidence 965 357899999999999999999999999 99999999999999999999999998864210
Q ss_pred ----CCccccCccCCCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhcccC-CCCCchhHH
Q 014478 141 ----GKSYSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALE-GHFSNDEGT 215 (424)
Q Consensus 141 ----~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 215 (424)
.....++..|+|||.+.+..++.++|+|||||++|||++|..||.......... ........ ......++.
T Consensus 169 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~pf~~~~~~~~~~----~~~~~~~~~~~~~~~~~~ 244 (305)
T cd05609 169 REFLDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEELFG----QVISDDIEWPEGDEALPA 244 (305)
T ss_pred hhccccCCccCccccCchhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHH----HHHhcccCCCCccccCCH
Confidence 011346788999999988889999999999999999999998887542221111 11111111 111224678
Q ss_pred HHHHHHHHhcccCcCCCCCHHHHHHHH
Q 014478 216 ELVRLASRCLQSEARERPNAKSLVISL 242 (424)
Q Consensus 216 ~l~~li~~cl~~dp~~Rps~~~~~~~l 242 (424)
++.++|.+||+.||++||++.++.+.|
T Consensus 245 ~~~~li~~~l~~~P~~R~~~~~~~~ll 271 (305)
T cd05609 245 DAQDLISRLLRQNPLERLGTGGAFEVK 271 (305)
T ss_pred HHHHHHHHHhccChhhccCccCHHHHH
Confidence 899999999999999999865444433
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a |
| >cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-37 Score=285.26 Aligned_cols=237 Identities=18% Similarity=0.250 Sum_probs=185.7
Q ss_pred CCCcccceeee--ecceecccccCCCc---hhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHhHh
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESSD---LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHL 76 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~~---~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~l 76 (424)
|++|.||++.+ .+..+++|++.... ...+.+.+|++++++++||||+++++++..+...++||||+++++|..++
T Consensus 12 g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~e~~~~~~l~~~~ 91 (286)
T cd07847 12 GSYGVVFKCRNRETGQIVAIKKFVESEDDPVIKKIALREIRMLKQLKHPNLVNLIEVFRRKRKLHLVFEYCDHTVLNELE 91 (286)
T ss_pred cCCeEEEEEEECCCCcEEEEEEEeecccCccccHHHHHHHHHHHhCCCCCEeeeeeEEeeCCEEEEEEeccCccHHHHHH
Confidence 78899999988 35667777664332 23456789999999999999999999999999999999999999888877
Q ss_pred ccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCCC----ccccCccCCC
Q 014478 77 FHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGK----SYSTNLAFTP 152 (424)
Q Consensus 77 ~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~~----~~~gt~~y~a 152 (424)
.. ...+++.++..++.|++.||.|||+.+ ++||||||+||+++.++.++|+|||++....... ...++..|+|
T Consensus 92 ~~--~~~~~~~~~~~~~~ql~~~l~~LH~~~-i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~a 168 (286)
T cd07847 92 KN--PRGVPEHLIKKIIWQTLQAVNFCHKHN-CIHRDVKPENILITKQGQIKLCDFGFARILTGPGDDYTDYVATRWYRA 168 (286)
T ss_pred hC--CCCCCHHHHHHHHHHHHHHHHHHHHCC-ceecCCChhhEEEcCCCcEEECccccceecCCCcccccCcccccccCC
Confidence 53 446899999999999999999999999 9999999999999999999999999988765432 3457789999
Q ss_pred cccccc-CCCCCCcceehhHHHHHHHhhCCCCCCchhhHHH--hhhhhh-H-------hhh----------cccCCC---
Q 014478 153 PEYMRT-GRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLI--RSKNFL-L-------LMD----------SALEGH--- 208 (424)
Q Consensus 153 PE~~~~-~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~--~~~~~~-~-------~~~----------~~~~~~--- 208 (424)
||.+.+ ..++.++||||||+++|+|++|..||+....... ...... . ... +.....
T Consensus 169 PE~~~~~~~~~~~~Di~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (286)
T cd07847 169 PELLVGDTQYGPPVDVWAIGCVFAELLTGQPLWPGKSDVDQLYLIRKTLGDLIPRHQQIFSTNQFFKGLSIPEPETREPL 248 (286)
T ss_pred HHHHhCCCCcCchhhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChHHhhhcccccccccccCCCcccccCH
Confidence 999876 4578899999999999999999988765321100 000000 0 000 000000
Q ss_pred --CCchhHHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 014478 209 --FSNDEGTELVRLASRCLQSEARERPNAKSLVIS 241 (424)
Q Consensus 209 --~~~~~~~~l~~li~~cl~~dp~~Rps~~~~~~~ 241 (424)
.....+..+.+++.+||+.||++|||+.+++.+
T Consensus 249 ~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~ 283 (286)
T cd07847 249 ESKFPNISSPALSFLKGCLQMDPTERLSCEELLEH 283 (286)
T ss_pred HHHhccCCHHHHHHHHHHhcCCccccCCHHHHhcC
Confidence 012346789999999999999999999999854
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio |
| >cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-37 Score=288.02 Aligned_cols=237 Identities=15% Similarity=0.226 Sum_probs=184.9
Q ss_pred CCCcccceeee--ecceecccccCCCc--hhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHhHhc
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESSD--LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLF 77 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~~--~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~ 77 (424)
|++|.||.+.+ .+..+++|.+.... .....+.+|+.+++.++||||+++++++...+..++||||++ ++|.+++.
T Consensus 17 g~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~lv~e~~~-~~l~~~l~ 95 (301)
T cd07873 17 GTYATVYKGRSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEYLD-KDLKQYLD 95 (301)
T ss_pred CcCEEEEEEEEcCCCcEEEEEEEecccccCchhHHHHHHHHHHhcCCCCcceEEEEEecCCeEEEEEeccc-cCHHHHHH
Confidence 89999999987 45667777664332 234567889999999999999999999999999999999997 49999886
Q ss_pred cCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCC----CccccCccCCCc
Q 014478 78 HWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG----KSYSTNLAFTPP 153 (424)
Q Consensus 78 ~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~----~~~~gt~~y~aP 153 (424)
. ....+++..+..++.|++.||.|||+.+ ++||||||+||+++.++.++|+|||++...... ....++..|+||
T Consensus 96 ~-~~~~~~~~~~~~~~~qi~~aL~~lH~~~-i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~~P 173 (301)
T cd07873 96 D-CGNSINMHNVKLFLFQLLRGLNYCHRRK-VLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTYSNEVVTLWYRPP 173 (301)
T ss_pred h-cCCCCCHHHHHHHHHHHHHHHHHHHhCC-eeCCCCCHHHEEECCCCcEEECcCcchhccCCCCCcccccceeecccCc
Confidence 5 3456899999999999999999999999 999999999999999999999999998764322 223568899999
Q ss_pred cccccC-CCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhh-----------hhHhhhc------ccC-------CC
Q 014478 154 EYMRTG-RVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKN-----------FLLLMDS------ALE-------GH 208 (424)
Q Consensus 154 E~~~~~-~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~-----------~~~~~~~------~~~-------~~ 208 (424)
|++.+. .++.++|||||||++|+|++|+.||+........... +...... ... ..
T Consensus 174 E~~~~~~~~~~~~Dv~slG~~l~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (301)
T cd07873 174 DILLGSTDYSTQIDMWGVGCIFYEMSTGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEEFKSYNYPKYRADCLHN 253 (301)
T ss_pred HHHhCCCCCccHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCChhhchhhhccccccccccCccccccHHh
Confidence 998754 4788999999999999999999888754221110000 0000000 000 00
Q ss_pred CCchhHHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 014478 209 FSNDEGTELVRLASRCLQSEARERPNAKSLVIS 241 (424)
Q Consensus 209 ~~~~~~~~l~~li~~cl~~dp~~Rps~~~~~~~ 241 (424)
....+++.+.++|.+||..||.+|||+++++.+
T Consensus 254 ~~~~~~~~~~~li~~ml~~dp~~R~t~~eil~h 286 (301)
T cd07873 254 HAPRLDSDGAELLSKLLQFEGRKRISAEEAMKH 286 (301)
T ss_pred hcCCCCHHHHHHHHHHhcCCcccCcCHHHHhcC
Confidence 112457789999999999999999999999974
|
Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl |
| >cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-37 Score=284.74 Aligned_cols=234 Identities=20% Similarity=0.203 Sum_probs=184.0
Q ss_pred CCCcccceeee--ecceecccccCCCc----hhhhHHHHHHHHHhc---CCCcCcceeEEEEEeCCeeeEEEecCCCCCH
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESSD----LGETLNLEEAKAVGN---LRSERLANLIGCCYEADERLLVAEFMPNETL 72 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~~----~~~~~~~~E~~~l~~---l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL 72 (424)
|+||.||.+.+ .+..+++|.+.... .....+.+|..+++. ..||||+.+++++..++..++||||+++|+|
T Consensus 5 G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L 84 (279)
T cd05633 5 GGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFHTPDKLCFILDLMNGGDL 84 (279)
T ss_pred CCCeEEEEEEECCCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEecCCeEEEEEecCCCCCH
Confidence 89999999887 45667777664332 223344555544443 4799999999999998899999999999999
Q ss_pred HhHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCC--CccccCccC
Q 014478 73 AKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG--KSYSTNLAF 150 (424)
Q Consensus 73 ~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~--~~~~gt~~y 150 (424)
.+++.. ...+++.++..++.|++.||.|||+++ ++||||||+||+++.++.++|+|||++...... ....||..|
T Consensus 85 ~~~i~~--~~~l~~~~~~~i~~qi~~al~~lH~~~-ivH~dikp~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~y 161 (279)
T cd05633 85 HYHLSQ--HGVFSEKEMRFYATEIILGLEHMHNRF-VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVGTHGY 161 (279)
T ss_pred HHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC-cCCCCCCHHHEEECCCCCEEEccCCcceeccccCccCcCCCcCc
Confidence 998864 457999999999999999999999999 999999999999999999999999998754432 234689999
Q ss_pred CCcccccc-CCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHHHHHHHHHhcccCc
Q 014478 151 TPPEYMRT-GRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEA 229 (424)
Q Consensus 151 ~aPE~~~~-~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp 229 (424)
+|||.+.+ ..++.++|||||||++|+|++|..||......... .. ...........+..++.++.++|.+||..||
T Consensus 162 ~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~--~~-~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p 238 (279)
T cd05633 162 MAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKH--EI-DRMTLTVNVELPDSFSPELKSLLEGLLQRDV 238 (279)
T ss_pred cCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcCCCCCcCHH--HH-HHHhhcCCcCCccccCHHHHHHHHHHhcCCH
Confidence 99999874 45789999999999999999999887643111111 11 1111122334456678899999999999999
Q ss_pred CCCC-----CHHHHHHH
Q 014478 230 RERP-----NAKSLVIS 241 (424)
Q Consensus 230 ~~Rp-----s~~~~~~~ 241 (424)
++|| |+++++++
T Consensus 239 ~~R~~~~~~~~~~~~~h 255 (279)
T cd05633 239 SKRLGCLGRGAQEVKEH 255 (279)
T ss_pred HHhcCCCCCCHHHHHhC
Confidence 9999 69999876
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi |
| >cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-37 Score=290.70 Aligned_cols=237 Identities=12% Similarity=0.172 Sum_probs=176.0
Q ss_pred CCCcccceeeee----cceecccccCCCchhhhHHHHHHHHHhcCCCcCcceeEEEEEe--CCeeeEEEecCCCCCHHhH
Q 014478 2 GGRCSKFSICWF----HCHLKSSVLESSDLGETLNLEEAKAVGNLRSERLANLIGCCYE--ADERLLVAEFMPNETLAKH 75 (424)
Q Consensus 2 G~~g~v~~~~~~----~~~v~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~--~~~~~lv~e~~~~gsL~~~ 75 (424)
|+||.||++.+. +..+++|.+..... ...+.+|+++++.++||||+++++++.. +...++||||+.+ +|.++
T Consensus 12 G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~~-~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~~-~l~~~ 89 (317)
T cd07867 12 GTYGHVYKAKRKDGKDEKEYALKQIEGTGI-SMSACREIALLRELKHPNVIALQKVFLSHSDRKVWLLFDYAEH-DLWHI 89 (317)
T ss_pred CCCeeEEEEEecCCCccceEEEEEecCCCC-cHHHHHHHHHHHhCCCCCeeeEEEEEeccCCCeEEEEEeeeCC-cHHHH
Confidence 899999999863 24567676654432 3467889999999999999999999854 4567899999965 78777
Q ss_pred hccC-------CCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeee----cCCCCeEEccccccccCCCC---
Q 014478 76 LFHW-------ETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILF----DKDGNPRLSSFGLMKNSRDG--- 141 (424)
Q Consensus 76 l~~~-------~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill----~~~~~~kl~Dfg~~~~~~~~--- 141 (424)
+... ....+++..+..++.|++.||.|||+++ ++||||||+|||+ +.++.+||+|||+++.....
T Consensus 90 ~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~-ivH~Dlkp~Nil~~~~~~~~~~~kl~DfG~a~~~~~~~~~ 168 (317)
T cd07867 90 IKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHANW-VLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKP 168 (317)
T ss_pred HHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCC-EEcCCCCHHHEEEccCCCCCCcEEEeeccceeccCCCccc
Confidence 6421 1235889999999999999999999999 9999999999999 55678999999999865432
Q ss_pred ----CccccCccCCCccccccC-CCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhh-----h---------------h
Q 014478 142 ----KSYSTNLAFTPPEYMRTG-RVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRS-----K---------------N 196 (424)
Q Consensus 142 ----~~~~gt~~y~aPE~~~~~-~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~-----~---------------~ 196 (424)
....+|..|+|||++.+. .++.++|||||||++|||+||+.||.....+.... . .
T Consensus 169 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (317)
T cd07867 169 LADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPFHHDQLDRIFSVMGFPADKD 248 (317)
T ss_pred ccccCcceecccccCcHHhcCCCccCcHHHHHhHHHHHHHHHhCCCCcccccccccccccccHHHHHHHHHhcCCCChhh
Confidence 234578999999998764 57899999999999999999998775321110000 0 0
Q ss_pred hhH---------hhhccc------------CCCCCchhHHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 014478 197 FLL---------LMDSAL------------EGHFSNDEGTELVRLASRCLQSEARERPNAKSLVIS 241 (424)
Q Consensus 197 ~~~---------~~~~~~------------~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~~~~~ 241 (424)
+.. ...... ........+..+.+++.+||+.||.+|||+.+++.+
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dP~~R~t~~e~l~h 314 (317)
T cd07867 249 WEDIRKMPEYPTLQKDFRRTTYANSSLIKYMEKHKVKPDSKVFLLLQKLLTMDPTKRITSEQALQD 314 (317)
T ss_pred hhhhhhcccchhhhhhhcccccCCchhhhhhhcccCCCChHHHHHHHHHhccCcccccCHHHHhcC
Confidence 000 000000 000011124568899999999999999999999864
|
Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as |
| >cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-37 Score=281.08 Aligned_cols=234 Identities=16% Similarity=0.210 Sum_probs=190.5
Q ss_pred CCCcccceeee--ecceecccccCCC---chhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHhHh
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESS---DLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHL 76 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~---~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~l 76 (424)
|++|.||++.+ .+..+++|.+... ....+.+.+|+.+++.++|+||+++++.+..+...++|+||+++++|.+++
T Consensus 11 g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~ 90 (257)
T cd08225 11 GSFGKIYLAKAKSDSEHCVIKEIDLTKMPVKEKEASKKEVILLAKMKHPNIVTFFASFQENGRLFIVMEYCDGGDLMKRI 90 (257)
T ss_pred CCcceEEEEEEcCCCceEEEEEeeHhhccchhhHHHHHHHHHHHhCCCCChhhhhheeccCCeEEEEEecCCCCcHHHHH
Confidence 78999999988 3456666666433 234567889999999999999999999999999999999999999999999
Q ss_pred ccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCC-eEEccccccccCCCCC----ccccCccCC
Q 014478 77 FHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGN-PRLSSFGLMKNSRDGK----SYSTNLAFT 151 (424)
Q Consensus 77 ~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~-~kl~Dfg~~~~~~~~~----~~~gt~~y~ 151 (424)
....+..+++..+..++.|++.||.|||+.+ ++|+||||+||+++.++. ++|+|||.+....... ...|++.|+
T Consensus 91 ~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~-i~H~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~ 169 (257)
T cd08225 91 NRQRGVLFSEDQILSWFVQISLGLKHIHDRK-ILHRDIKSQNIFLSKNGMVAKLGDFGIARQLNDSMELAYTCVGTPYYL 169 (257)
T ss_pred HhccCCCCCHHHHHHHHHHHHHHHHHHHHCC-cccccCCHHHEEEcCCCCeEEecccccchhccCCcccccccCCCcccc
Confidence 7644456899999999999999999999999 999999999999988864 6999999987654432 235788999
Q ss_pred CccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHHHHHHHHHhcccCcCC
Q 014478 152 PPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARE 231 (424)
Q Consensus 152 aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~ 231 (424)
|||++.+..++.++|+||||+++++|++|..|+....... ....... ......+...+.++.+++.+||..+|++
T Consensus 170 ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~----~~~~~~~-~~~~~~~~~~~~~~~~~i~~~l~~~p~~ 244 (257)
T cd08225 170 SPEICQNRPYNNKTDIWSLGCVLYELCTLKHPFEGNNLHQ----LVLKICQ-GYFAPISPNFSRDLRSLISQLFKVSPRD 244 (257)
T ss_pred CHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCccHHH----HHHHHhc-ccCCCCCCCCCHHHHHHHHHHhccChhh
Confidence 9999988889999999999999999999998876432111 1111111 1122334456778999999999999999
Q ss_pred CCCHHHHHHH
Q 014478 232 RPNAKSLVIS 241 (424)
Q Consensus 232 Rps~~~~~~~ 241 (424)
|||+.+++.+
T Consensus 245 Rpt~~~ll~~ 254 (257)
T cd08225 245 RPSITSILKR 254 (257)
T ss_pred CcCHHHHhhC
Confidence 9999999864
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown. |
| >cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-37 Score=283.43 Aligned_cols=233 Identities=18% Similarity=0.184 Sum_probs=193.2
Q ss_pred CCCcccceeeee--cceecccccCCCc----hhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHhH
Q 014478 2 GGRCSKFSICWF--HCHLKSSVLESSD----LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKH 75 (424)
Q Consensus 2 G~~g~v~~~~~~--~~~v~~~~~~~~~----~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~ 75 (424)
|++|.||.+.+. +..+++|++.... ...+.+.+|++++++++||||+++++.+..+...++||||+.|++|.++
T Consensus 11 g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~ 90 (258)
T cd05578 11 GAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHPFLVNLWYSFQDEENMYLVVDLLLGGDLRYH 90 (258)
T ss_pred CCCceEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCCCCChHHHHHhhcCCCeEEEEEeCCCCCCHHHH
Confidence 889999999884 6777777765432 3457889999999999999999999999999999999999999999999
Q ss_pred hccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCC---CccccCccCCC
Q 014478 76 LFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG---KSYSTNLAFTP 152 (424)
Q Consensus 76 l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~---~~~~gt~~y~a 152 (424)
+.. ..++++.++..++.|++.||.|||+++ ++|+||+|+||+++.++.++|+|||++...... ....++..|+|
T Consensus 91 l~~--~~~l~~~~~~~~~~~i~~~l~~lh~~~-i~h~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~y~~ 167 (258)
T cd05578 91 LSQ--KVKFSEEQVKFWICEIVLALEYLHSKG-IIHRDIKPDNILLDEQGHVHITDFNIATKVTPDTLTTSTSGTPGYMA 167 (258)
T ss_pred HHh--cCCcCHHHHHHHHHHHHHHHHHHHhCC-eeccCCCHHHeEEcCCCCEEEeecccccccCCCccccccCCChhhcC
Confidence 964 358999999999999999999999999 999999999999999999999999998765543 33467889999
Q ss_pred ccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHHHHHHHHHhcccCcCCC
Q 014478 153 PEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARER 232 (424)
Q Consensus 153 PE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~R 232 (424)
||.+.+..++.++|+||||+++|+|++|..|+...... ........... .....+...+..+.++|.+||..||.+|
T Consensus 168 PE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~--~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~~~l~~~p~~R 244 (258)
T cd05578 168 PEVLCRQGYSVAVDWWSLGVTAYECLRGKRPYRGHSRT--IRDQIRAKQET-ADVLYPATWSTEAIDAINKLLERDPQKR 244 (258)
T ss_pred HHHHcccCCCCcccchhhHHHHHHHHhCCCCCCCCCcc--HHHHHHHHhcc-ccccCcccCcHHHHHHHHHHccCChhHc
Confidence 99998888899999999999999999999887764321 01111111111 3344556678899999999999999999
Q ss_pred CCH--HHHHH
Q 014478 233 PNA--KSLVI 240 (424)
Q Consensus 233 ps~--~~~~~ 240 (424)
|++ +++++
T Consensus 245 ~~~~~~~l~~ 254 (258)
T cd05578 245 LGDNLKDLKN 254 (258)
T ss_pred CCccHHHHhc
Confidence 999 66653
|
Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A. |
| >cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-37 Score=280.53 Aligned_cols=232 Identities=19% Similarity=0.156 Sum_probs=183.8
Q ss_pred CCCcccceeee--ecceecccccCCCch----hhhHHHHHHHHH-hcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHh
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESSDL----GETLNLEEAKAV-GNLRSERLANLIGCCYEADERLLVAEFMPNETLAK 74 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~~~----~~~~~~~E~~~l-~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~ 74 (424)
|++|.||.+.+ .+..+++|++..... ....+..|..++ ...+|+||+++++++..++..++||||+++++|.+
T Consensus 7 g~~~~v~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~ 86 (260)
T cd05611 7 GAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQSKDYLYLVMEYLNGGDCAS 86 (260)
T ss_pred CCCeeEEEEEecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEEcCCeEEEEEeccCCCCHHH
Confidence 88999999987 556788887754332 122344455444 45589999999999999999999999999999999
Q ss_pred HhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCCCccccCccCCCcc
Q 014478 75 HLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLAFTPPE 154 (424)
Q Consensus 75 ~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~gt~~y~aPE 154 (424)
++.. ...+++.++..++.|++.||.|||+.+ ++||||+|+||+++.++.++|+|||+++.........++..|++||
T Consensus 87 ~l~~--~~~~~~~~~~~i~~qi~~aL~~lH~~~-i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~y~~pe 163 (260)
T cd05611 87 LIKT--LGGLPEDWAKQYIAEVVLGVEDLHQRG-IIHRDIKPENLLIDQTGHLKLTDFGLSRNGLENKKFVGTPDYLAPE 163 (260)
T ss_pred HHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCCHHHeEECCCCcEEEeecccceeccccccCCCCcCccChh
Confidence 9964 457899999999999999999999999 9999999999999999999999999988766555667889999999
Q ss_pred ccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHHHHHHHHHhcccCcCCCCC
Q 014478 155 YMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERPN 234 (424)
Q Consensus 155 ~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps 234 (424)
.+.+..++.++||||||+++|+|++|..|+............. .............+++++.+++.+||+.||++||+
T Consensus 164 ~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~ 241 (260)
T cd05611 164 TILGVGDDKMSDWWSLGCVIFEFLFGYPPFHAETPDAVFDNIL--SRRINWPEEVKEFCSPEAVDLINRLLCMDPAKRLG 241 (260)
T ss_pred hhcCCCCcchhhhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH--hcccCCCCcccccCCHHHHHHHHHHccCCHHHccC
Confidence 9988888999999999999999999998876542221111000 00111122223356789999999999999999996
Q ss_pred HHHH
Q 014478 235 AKSL 238 (424)
Q Consensus 235 ~~~~ 238 (424)
+.++
T Consensus 242 ~~~~ 245 (260)
T cd05611 242 ANGY 245 (260)
T ss_pred CCcH
Confidence 6543
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do |
| >cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-37 Score=288.07 Aligned_cols=237 Identities=17% Similarity=0.155 Sum_probs=183.2
Q ss_pred CCCcccceeee--ecceecccccCCCc---hhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHhHh
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESSD---LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHL 76 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~~---~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~l 76 (424)
|++|.||.+.+ .+..+++|.+.... .....+.+|+.++++++||||+++++++.+....++|+||+++ +|.+++
T Consensus 11 g~~~~vy~~~~~~~g~~~~~k~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~-~l~~~~ 89 (284)
T cd07839 11 GTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLYDVLHSDKKLTLVFEYCDQ-DLKKYF 89 (284)
T ss_pred cCCeEEEEEEECCCCcEEEEEEeecccccccCccchhHHHHHHHhcCCCCeeeHHHHhccCCceEEEEecCCC-CHHHHH
Confidence 78999999988 46667777664332 2235678899999999999999999999999999999999975 888877
Q ss_pred ccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCC----CccccCccCCC
Q 014478 77 FHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG----KSYSTNLAFTP 152 (424)
Q Consensus 77 ~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~----~~~~gt~~y~a 152 (424)
.. ....+++..+..++.||+.||.|||+++ ++||||||+||+++.++.++|+|||+++..... ....++..|+|
T Consensus 90 ~~-~~~~~~~~~~~~~~~qi~~al~~LH~~~-i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~a 167 (284)
T cd07839 90 DS-CNGDIDPEIVKSFMFQLLKGLAFCHSHN-VLHRDLKPQNLLINKNGELKLADFGLARAFGIPVRCYSAEVVTLWYRP 167 (284)
T ss_pred Hh-cCCCCCHHHHHHHHHHHHHHHHHHHHCC-EecCCCCHHHEEEcCCCcEEECccchhhccCCCCCCcCCCccccCCcC
Confidence 54 2456899999999999999999999999 999999999999999999999999998765432 22356789999
Q ss_pred ccccccCC-CCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhh---------------HhhhcccC---------C
Q 014478 153 PEYMRTGR-VTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFL---------------LLMDSALE---------G 207 (424)
Q Consensus 153 PE~~~~~~-~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~---------------~~~~~~~~---------~ 207 (424)
||++.+.. ++.++|||||||++|+|++|..|+.............. ........ .
T Consensus 168 PE~~~~~~~~~~~~DiwslG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (284)
T cd07839 168 PDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEESWPGVSKLPDYKPYPMYPATTSLV 247 (284)
T ss_pred hHHHhCCcccCcHHHHHHHHHHHHHHHhcCCCCcCCCCHHHHHHHHHHHhCCCChHHhHHhhhcccccccCCCCCcchhh
Confidence 99987654 68899999999999999999877533211100000000 00000000 0
Q ss_pred CCCchhHHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 014478 208 HFSNDEGTELVRLASRCLQSEARERPNAKSLVIS 241 (424)
Q Consensus 208 ~~~~~~~~~l~~li~~cl~~dp~~Rps~~~~~~~ 241 (424)
.....+++++.++|.+||+.||.+|||+++++.+
T Consensus 248 ~~~~~~~~~~~~li~~~l~~~P~~R~t~~~il~h 281 (284)
T cd07839 248 NVVPKLNSTGRDLLQNLLVCNPVQRISAEEALQH 281 (284)
T ss_pred hhcccCCHHHHHHHHHHhcCChhhcCCHHHHhcC
Confidence 1112357789999999999999999999999864
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also |
| >PHA03390 pk1 serine/threonine-protein kinase 1; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-37 Score=281.86 Aligned_cols=231 Identities=13% Similarity=0.165 Sum_probs=182.9
Q ss_pred CCCcccceeee--ecceecccccCCCchhhhHHHHHHHHHhcC-CCcCcceeEEEEEeCCeeeEEEecCCCCCHHhHhcc
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESSDLGETLNLEEAKAVGNL-RSERLANLIGCCYEADERLLVAEFMPNETLAKHLFH 78 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~ 78 (424)
|++|.||.+.. .+..+++++........ .|+.....+ +||||+++++.+..++..++||||+++++|.+++..
T Consensus 27 g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~----~e~~~~~~~~~h~~iv~~~~~~~~~~~~~iv~e~~~~~~L~~~l~~ 102 (267)
T PHA03390 27 GKFGKVSVLKHKPTQKLFVQKIIKAKNFNA----IEPMVHQLMKDNPNFIKLYYSVTTLKGHVLIMDYIKDGDLFDLLKK 102 (267)
T ss_pred CCceEEEEEEEcCCCcEEEEEEEehhhcch----hhHHHHHHhhcCCCEEEEEEEEecCCeeEEEEEcCCCCcHHHHHHh
Confidence 78999998876 45556666654432211 122222222 799999999999999999999999999999999964
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCC-CeEEccccccccCCCCCccccCccCCCccccc
Q 014478 79 WETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDG-NPRLSSFGLMKNSRDGKSYSTNLAFTPPEYMR 157 (424)
Q Consensus 79 ~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~-~~kl~Dfg~~~~~~~~~~~~gt~~y~aPE~~~ 157 (424)
...+++.++..++.|++.||.|||+.+ ++||||||+||+++.++ .++|+|||+++.........++..|+|||++.
T Consensus 103 --~~~l~~~~~~~~~~qi~~~l~~lH~~~-i~H~dl~p~nil~~~~~~~~~l~dfg~~~~~~~~~~~~~~~~y~aPE~~~ 179 (267)
T PHA03390 103 --EGKLSEAEVKKIIRQLVEALNDLHKHN-IIHNDIKLENVLYDRAKDRIYLCDYGLCKIIGTPSCYDGTLDYFSPEKIK 179 (267)
T ss_pred --cCCCCHHHHHHHHHHHHHHHHHHHhCC-eeeCCCCHHHEEEeCCCCeEEEecCccceecCCCccCCCCCcccChhhhc
Confidence 348999999999999999999999999 99999999999999888 99999999998777666677899999999999
Q ss_pred cCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHHHHHHHHHhcccCcCCCCC-HH
Q 014478 158 TGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERPN-AK 236 (424)
Q Consensus 158 ~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps-~~ 236 (424)
+..++.++||||||+++|+|++|..||............+.... ......+...++.+.++|.+||+.||.+||+ ++
T Consensus 180 ~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~ 257 (267)
T PHA03390 180 GHNYDVSFDWWAVGVLTYELLTGKHPFKEDEDEELDLESLLKRQ--QKKLPFIKNVSKNANDFVQSMLKYNINYRLTNYN 257 (267)
T ss_pred CCCCCchhhHHHHHHHHHHHHHCCCCCCCCCcchhhHHHHHHhh--cccCCcccccCHHHHHHHHHHhccChhhCCchHH
Confidence 88899999999999999999999988764322222111222111 1112334467889999999999999999995 69
Q ss_pred HHHHH
Q 014478 237 SLVIS 241 (424)
Q Consensus 237 ~~~~~ 241 (424)
+++++
T Consensus 258 ~~l~h 262 (267)
T PHA03390 258 EIIKH 262 (267)
T ss_pred HHhcC
Confidence 98854
|
|
| >KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.7e-38 Score=267.84 Aligned_cols=234 Identities=17% Similarity=0.248 Sum_probs=184.5
Q ss_pred CCCcccceeeeec--ceecccccCCCc--hhhhHHHHHHHHHhcC-CCcCcceeEEEEEeCCeeeEEEecCCCCCHHhHh
Q 014478 2 GGRCSKFSICWFH--CHLKSSVLESSD--LGETLNLEEAKAVGNL-RSERLANLIGCCYEADERLLVAEFMPNETLAKHL 76 (424)
Q Consensus 2 G~~g~v~~~~~~~--~~v~~~~~~~~~--~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~l 76 (424)
|+.|.|++..+.. ..+++|-+.... +..++++..++++..- ..|+||+++|+|..+...+|.||.|.. .++.++
T Consensus 103 GtcG~V~k~~~rs~~~iiAVK~M~rt~Nkee~kRILmDldvv~~s~dcpyIV~c~GyFi~n~dV~IcMelMs~-C~ekLl 181 (391)
T KOG0983|consen 103 GTCGQVWKMRFRSTGHIIAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVQCFGYFITNTDVFICMELMST-CAEKLL 181 (391)
T ss_pred CCccceEEEEEcccceEEEEEeecccCCHHHHHHHHHhhhHHhhccCCCeeeeeeeEEeeCchHHHHHHHHHH-HHHHHH
Confidence 6678888887744 667777664433 4456777777766555 589999999999999999999999843 555555
Q ss_pred ccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCC---CccccCccCCCc
Q 014478 77 FHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG---KSYSTNLAFTPP 153 (424)
Q Consensus 77 ~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~---~~~~gt~~y~aP 153 (424)
.+ -.+++++..+-++...+++||.||.+++.|||||+||+|||+|..|++||||||++-+..++ +...|-+.||||
T Consensus 182 kr-ik~piPE~ilGk~tva~v~AL~YLKeKH~viHRDvKPSNILlDe~GniKlCDFGIsGrlvdSkAhtrsAGC~~YMaP 260 (391)
T KOG0983|consen 182 KR-IKGPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKAHTRSAGCAAYMAP 260 (391)
T ss_pred HH-hcCCchHHhhhhhHHHHHHHHHHHHHhcceeecccCccceEEccCCCEEeecccccceeecccccccccCCccccCc
Confidence 43 46789999999999999999999999866999999999999999999999999998776544 345688999999
Q ss_pred ccccc---CCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhcccCCCCC--chhHHHHHHHHHHhcccC
Q 014478 154 EYMRT---GRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFS--NDEGTELVRLASRCLQSE 228 (424)
Q Consensus 154 E~~~~---~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~~li~~cl~~d 228 (424)
|.+.- ..|+.++||||||+.++||.||+.|++....+. .....+.+... +..+ ...++.+++|+..||++|
T Consensus 261 ERidp~~~~kYDiRaDVWSlGITlveLaTg~yPy~~c~tdF---e~ltkvln~eP-P~L~~~~gFSp~F~~fv~~CL~kd 336 (391)
T KOG0983|consen 261 ERIDPPDKPKYDIRADVWSLGITLVELATGQYPYKGCKTDF---EVLTKVLNEEP-PLLPGHMGFSPDFQSFVKDCLTKD 336 (391)
T ss_pred cccCCCCCCccchhhhhhhhccchhhhhcccCCCCCCCccH---HHHHHHHhcCC-CCCCcccCcCHHHHHHHHHHhhcC
Confidence 99863 369999999999999999999999988742221 11222222222 2222 237899999999999999
Q ss_pred cCCCCCHHHHHHH
Q 014478 229 ARERPNAKSLVIS 241 (424)
Q Consensus 229 p~~Rps~~~~~~~ 241 (424)
+.+||...+++++
T Consensus 337 ~r~RP~Y~~Ll~h 349 (391)
T KOG0983|consen 337 HRKRPKYNKLLEH 349 (391)
T ss_pred cccCcchHHHhcC
Confidence 9999999999876
|
|
| >KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-37 Score=268.64 Aligned_cols=237 Identities=15% Similarity=0.112 Sum_probs=186.6
Q ss_pred CCCcccceeee--ecceecccccCCCchhhhHHHHHHHHHhcC-CCcCcceeEEEEEe----CCeeeEEEecCCCCCHHh
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESSDLGETLNLEEAKAVGNL-RSERLANLIGCCYE----ADERLLVAEFMPNETLAK 74 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~----~~~~~lv~e~~~~gsL~~ 74 (424)
|=.|.|...+. .+...+.|++..+. ..++|+++.... .|||||+++++++. ...+.+|||.++||.|..
T Consensus 73 GinGkV~~C~~k~T~ekfALKvL~Ds~----KARrEVeLHw~~s~h~~iV~IidVyeNs~~~rkcLLiVmE~meGGeLfs 148 (400)
T KOG0604|consen 73 GINGKVVQCVHKRTQEKFALKVLLDSP----KARREVELHWMASGHPHIVSIIDVYENSYQGRKCLLIVMECMEGGELFS 148 (400)
T ss_pred ccCCceEEEEeccchhhhHHHHHhcCH----HHHhHhhhhhhhcCCCceEEeehhhhhhccCceeeEeeeecccchHHHH
Confidence 44455555544 55666777765544 346788887777 69999999999865 244679999999999999
Q ss_pred HhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecC---CCCeEEccccccccCCCC---CccccCc
Q 014478 75 HLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDK---DGNPRLSSFGLMKNSRDG---KSYSTNL 148 (424)
Q Consensus 75 ~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~---~~~~kl~Dfg~~~~~~~~---~~~~gt~ 148 (424)
.++....+.+++.++..|++||+.|+.|||+.+ |.||||||+|+|... |-.+||+|||+++..... .+.+-|+
T Consensus 149 riq~~g~~afTErea~eI~~qI~~Av~~lH~~n-IAHRDlKpENLLyt~t~~na~lKLtDfGFAK~t~~~~~L~TPc~TP 227 (400)
T KOG0604|consen 149 RIQDRGDQAFTEREASEIMKQIGLAVRYLHSMN-IAHRDLKPENLLYTTTSPNAPLKLTDFGFAKETQEPGDLMTPCFTP 227 (400)
T ss_pred HHHHcccccchHHHHHHHHHHHHHHHHHHHhcc-hhhccCChhheeeecCCCCcceEecccccccccCCCccccCCcccc
Confidence 999877888999999999999999999999999 999999999999954 446899999999986643 3456799
Q ss_pred cCCCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhh--cccCCCCCchhHHHHHHHHHHhcc
Q 014478 149 AFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMD--SALEGHFSNDEGTELVRLASRCLQ 226 (424)
Q Consensus 149 ~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~li~~cl~ 226 (424)
.|.|||++...+|+..+|+||+||++|-|++|.+||+..-...+.......+.. ...+.+.-..+|+...++|+.+|.
T Consensus 228 yYvaPevlg~eKydkscdmwSlgVimYIlLCGyPPFYS~hg~aispgMk~rI~~gqy~FP~pEWs~VSe~aKdlIR~LLk 307 (400)
T KOG0604|consen 228 YYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKRRIRTGQYEFPEPEWSCVSEAAKDLIRKLLK 307 (400)
T ss_pred cccCHHHhCchhcCCCCCccchhHHHHHhhcCCCcccccCCccCChhHHhHhhccCccCCChhHhHHHHHHHHHHHHHhc
Confidence 999999999889999999999999999999999998864221111111111211 122222223578899999999999
Q ss_pred cCcCCCCCHHHHHHHHH
Q 014478 227 SEARERPNAKSLVISLM 243 (424)
Q Consensus 227 ~dp~~Rps~~~~~~~l~ 243 (424)
.+|.+|.|+.+++++-+
T Consensus 308 t~PteRlTI~~~m~hpw 324 (400)
T KOG0604|consen 308 TEPTERLTIEEVMDHPW 324 (400)
T ss_pred CCchhheeHHHhhcCch
Confidence 99999999999987644
|
|
| >KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-37 Score=283.19 Aligned_cols=232 Identities=19% Similarity=0.230 Sum_probs=194.0
Q ss_pred CCCcccceeee--ecceecccccCCC----chhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHhH
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESS----DLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKH 75 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~----~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~ 75 (424)
||||.||.... ++.-.+.|++.+. ..+....++|-.+|.+++.+.||.+--.|+..+.+|+|+..|.||+|.-+
T Consensus 196 GGFGEV~acqvraTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~s~FiVslaYAfeTkd~LClVLtlMNGGDLkfH 275 (591)
T KOG0986|consen 196 GGFGEVCACQVRATGKMYACKKLDKKRIKKRKGETMALNEKQILEKVSSPFIVSLAYAFETKDALCLVLTLMNGGDLKFH 275 (591)
T ss_pred ccccceeEEEEecchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhccCcEEEEeeeecCCCceEEEEEeecCCceeEE
Confidence 89999998776 4554555655433 34556778999999999999999999999999999999999999999999
Q ss_pred hccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCCCc---cccCccCCC
Q 014478 76 LFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKS---YSTNLAFTP 152 (424)
Q Consensus 76 l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~~~---~~gt~~y~a 152 (424)
|.+.....+++..++-++.+|+.||++||..+ ||+||+||+|||+|+.|+++|+|+|+|..+..+.. ..||.+|||
T Consensus 276 iyn~g~~gF~e~ra~FYAAEi~cGLehlH~~~-iVYRDLKPeNILLDd~GhvRISDLGLAvei~~g~~~~~rvGT~GYMA 354 (591)
T KOG0986|consen 276 IYNHGNPGFDEQRARFYAAEIICGLEHLHRRR-IVYRDLKPENILLDDHGHVRISDLGLAVEIPEGKPIRGRVGTVGYMA 354 (591)
T ss_pred eeccCCCCCchHHHHHHHHHHHhhHHHHHhcc-eeeccCChhheeeccCCCeEeeccceEEecCCCCccccccCcccccC
Confidence 98777779999999999999999999999999 99999999999999999999999999998876643 378999999
Q ss_pred ccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHHHHHHHHHhcccCcCCC
Q 014478 153 PEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARER 232 (424)
Q Consensus 153 PE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~R 232 (424)
||++.++.|+...|.|||||++|||+.|+.||...... .....+...+ -......+...+++..++.+..|.+||.+|
T Consensus 355 PEvl~ne~Y~~s~Dwf~lGCllYemi~G~sPFr~~KeK-vk~eEvdrr~-~~~~~ey~~kFS~eakslc~~LL~Kdp~~R 432 (591)
T KOG0986|consen 355 PEVLQNEVYDFSPDWFSLGCLLYEMIAGHSPFRQRKEK-VKREEVDRRT-LEDPEEYSDKFSEEAKSLCEGLLTKDPEKR 432 (591)
T ss_pred HHHHcCCcccCCccHHHHHhHHHHHHcccCchhhhhhh-hhHHHHHHHH-hcchhhcccccCHHHHHHHHHHHccCHHHh
Confidence 99999999999999999999999999999998764221 1111111111 122335667789999999999999999999
Q ss_pred CCHH
Q 014478 233 PNAK 236 (424)
Q Consensus 233 ps~~ 236 (424)
--..
T Consensus 433 LGcr 436 (591)
T KOG0986|consen 433 LGCR 436 (591)
T ss_pred ccCC
Confidence 6543
|
|
| >cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-37 Score=281.78 Aligned_cols=236 Identities=16% Similarity=0.221 Sum_probs=190.0
Q ss_pred CCCcccceeee--ecceecccccCCCc-------hhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCH
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESSD-------LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETL 72 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~~-------~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL 72 (424)
|++|.||.+.. .+..+++|++.... ...+.+.+|++++++++|+||+++++++.+++..++||||+++++|
T Consensus 11 g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~v~e~~~~~~L 90 (268)
T cd06630 11 GAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRMLGATCEDSHFNLFVEWMAGGSV 90 (268)
T ss_pred cCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCceehhhceeccCCeEEEEEeccCCCcH
Confidence 78999998876 55667777664322 1246788999999999999999999999999999999999999999
Q ss_pred HhHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCC-CeEEccccccccCCCC--------Cc
Q 014478 73 AKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDG-NPRLSSFGLMKNSRDG--------KS 143 (424)
Q Consensus 73 ~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~-~~kl~Dfg~~~~~~~~--------~~ 143 (424)
.+++.. ..++++..+..++.|++.||.|||+++ ++|+||+|+||+++.++ .++|+|||++...... ..
T Consensus 91 ~~~l~~--~~~~~~~~~~~~~~ql~~al~~LH~~~-i~H~~i~~~nil~~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~ 167 (268)
T cd06630 91 SHLLSK--YGAFKEAVIINYTEQLLRGLSYLHENQ-IIHRDVKGANLLIDSTGQRLRIADFGAAARLAAKGTGAGEFQGQ 167 (268)
T ss_pred HHHHHH--hCCCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCCHHHEEEcCCCCEEEEcccccccccccccccCCccccc
Confidence 999864 457899999999999999999999999 99999999999998776 5999999998765432 12
Q ss_pred cccCccCCCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHHHHHHHHH
Q 014478 144 YSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASR 223 (424)
Q Consensus 144 ~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 223 (424)
..++..|+|||.+.+..++.++|+||||+++|+|++|..||......... ...............+...++++.+++.+
T Consensus 168 ~~~~~~~~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 246 (268)
T cd06630 168 LLGTIAFMAPEVLRGEQYGRSCDVWSVGCVIIEMATAKPPWNAEKHSNHL-ALIFKIASATTAPSIPEHLSPGLRDVTLR 246 (268)
T ss_pred cccccceeCHhHhccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCcchH-HHHHHHhccCCCCCCchhhCHHHHHHHHH
Confidence 35688999999998888899999999999999999999887543111000 11111111222344556678899999999
Q ss_pred hcccCcCCCCCHHHHHHH
Q 014478 224 CLQSEARERPNAKSLVIS 241 (424)
Q Consensus 224 cl~~dp~~Rps~~~~~~~ 241 (424)
||..+|++|||+.+++.+
T Consensus 247 ~l~~~p~~R~~~~~ll~~ 264 (268)
T cd06630 247 CLELQPEDRPPSRELLKH 264 (268)
T ss_pred HcCCCcccCcCHHHHhcC
Confidence 999999999999999854
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their |
| >cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.4e-37 Score=282.71 Aligned_cols=232 Identities=18% Similarity=0.220 Sum_probs=187.4
Q ss_pred CCCcccceeee--ecceecccccCCCc-hhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHhHhcc
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESSD-LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFH 78 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~ 78 (424)
|++|.||.+.+ .+..+++|++.... ...+.+.+|+.+++.++||||+++++++..++..++++||+++++|.+++..
T Consensus 30 g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~~~h~~vv~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~ 109 (285)
T cd06648 30 GSTGIVCIATDKSTGRQVAVKKMDLRKQQRRELLFNEVVIMRDYQHPNIVEMYSSYLVGDELWVVMEFLEGGALTDIVTH 109 (285)
T ss_pred CCCeEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHHcCCCChheEEEEEEcCCeEEEEEeccCCCCHHHHHHh
Confidence 78899999987 34556666654332 3355688999999999999999999999999999999999999999999854
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCC----CccccCccCCCcc
Q 014478 79 WETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG----KSYSTNLAFTPPE 154 (424)
Q Consensus 79 ~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~----~~~~gt~~y~aPE 154 (424)
.++++.++..++.|++.||.|||+++ ++||||+|+||+++.++.++|+|||++...... ....|+..|+|||
T Consensus 110 ---~~~~~~~~~~~~~ql~~~l~~lH~~~-i~H~dl~p~Nil~~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~y~aPE 185 (285)
T cd06648 110 ---TRMNEEQIATVCLAVLKALSFLHAQG-VIHRDIKSDSILLTSDGRVKLSDFGFCAQVSKEVPRRKSLVGTPYWMAPE 185 (285)
T ss_pred ---CCCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCChhhEEEcCCCcEEEcccccchhhccCCcccccccCCccccCHH
Confidence 56899999999999999999999999 999999999999999999999999987654332 2345788999999
Q ss_pred ccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhc-ccCCCCCchhHHHHHHHHHHhcccCcCCCC
Q 014478 155 YMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDS-ALEGHFSNDEGTELVRLASRCLQSEARERP 233 (424)
Q Consensus 155 ~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~li~~cl~~dp~~Rp 233 (424)
.+.+..++.++||||||+++|+|++|..|+......... ...... ......+..++..+.+++.+||..+|++||
T Consensus 186 ~~~~~~~~~~~Dv~slGv~l~ell~g~~p~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rp 261 (285)
T cd06648 186 VISRLPYGTEVDIWSLGIMVIEMVDGEPPYFNEPPLQAM----KRIRDNLPPKLKNLHKVSPRLRSFLDRMLVRDPAQRA 261 (285)
T ss_pred HhcCCCCCCcccHHHHHHHHHHHHhCCCCCcCCCHHHHH----HHHHhcCCCCCcccccCCHHHHHHHHHHcccChhhCc
Confidence 998888999999999999999999999887553111110 111111 011111223678899999999999999999
Q ss_pred CHHHHHHH
Q 014478 234 NAKSLVIS 241 (424)
Q Consensus 234 s~~~~~~~ 241 (424)
|+.+++.+
T Consensus 262 t~~~il~~ 269 (285)
T cd06648 262 TAAELLNH 269 (285)
T ss_pred CHHHHccC
Confidence 99999854
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun |
| >cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-37 Score=286.00 Aligned_cols=235 Identities=17% Similarity=0.260 Sum_probs=184.1
Q ss_pred CCCcccceeee--ecceecccccCCCc--hhhhHHHHHHHHHhcCC-CcCcceeEEEEEeCCeeeEEEecCCCCCHHhH-
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESSD--LGETLNLEEAKAVGNLR-SERLANLIGCCYEADERLLVAEFMPNETLAKH- 75 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~~--~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~- 75 (424)
|++|.||.+.+ .+..+++|.+.... .....+.+|+.++.++. ||||+++++++..+...+++|||+.+ +|.++
T Consensus 15 G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~~~~~~~~~e~~~~-~l~~l~ 93 (288)
T cd06616 15 GAFGTVNKMLHKPSGTIMAVKRIRSTVDEKEQKRLLMDLDVVMRSSDCPYIVKFYGALFREGDCWICMELMDI-SLDKFY 93 (288)
T ss_pred CCceEEEEEEECCCCCEEEEEEehhccChHHHHHHHHHHHHHHHhcCCCCEeeeeeEEecCCcEEEEEecccC-CHHHHH
Confidence 88999999887 45667777664332 34567889999999995 99999999999998889999999864 65543
Q ss_pred --hccCCCCCCCHHHHHHHHHHHHHHHHHHHhC-CCcccccCCCCCeeecCCCCeEEccccccccCCCC---CccccCcc
Q 014478 76 --LFHWETQPMKWAMRLRVALYLAQALEYCSSK-GRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG---KSYSTNLA 149 (424)
Q Consensus 76 --l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~-~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~---~~~~gt~~ 149 (424)
+.......+++..+..++.|++.||+|||+. + ++||||||+||+++.++.++|+|||+++..... ....++..
T Consensus 94 ~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~-i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~ 172 (288)
T cd06616 94 KYVYEVLKSVIPEEILGKIAVATVKALNYLKEELK-IIHRDVKPSNILLDRNGNIKLCDFGISGQLVDSIAKTRDAGCRP 172 (288)
T ss_pred HHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhcCC-eeccCCCHHHEEEccCCcEEEeecchhHHhccCCccccccCccC
Confidence 2222346799999999999999999999985 7 999999999999999999999999998754432 23467889
Q ss_pred CCCccccccC---CCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhh---cccCCCCCchhHHHHHHHHHH
Q 014478 150 FTPPEYMRTG---RVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMD---SALEGHFSNDEGTELVRLASR 223 (424)
Q Consensus 150 y~aPE~~~~~---~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~l~~li~~ 223 (424)
|+|||++.+. .++.++|||||||++|+|++|+.||..... .. ........ +......+..++.++.+|+.+
T Consensus 173 y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~-~~--~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 249 (288)
T cd06616 173 YMAPERIDPSARDGYDVRSDVWSLGITLYEVATGKFPYPKWNS-VF--DQLTQVVKGDPPILSNSEEREFSPSFVNFINL 249 (288)
T ss_pred ccCHHHhccccccCCcchhhhhHHHHHHHHHHhCCCCchhcch-HH--HHHhhhcCCCCCcCCCcCCCccCHHHHHHHHH
Confidence 9999999866 588999999999999999999988765321 01 11111111 111222223478899999999
Q ss_pred hcccCcCCCCCHHHHHHH
Q 014478 224 CLQSEARERPNAKSLVIS 241 (424)
Q Consensus 224 cl~~dp~~Rps~~~~~~~ 241 (424)
||+.||++|||+++++.+
T Consensus 250 ~l~~~p~~Rpt~~~i~~~ 267 (288)
T cd06616 250 CLIKDESKRPKYKELLEH 267 (288)
T ss_pred HccCChhhCcCHHHHhcC
Confidence 999999999999999875
|
Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates |
| >cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.7e-37 Score=283.53 Aligned_cols=235 Identities=15% Similarity=0.156 Sum_probs=185.4
Q ss_pred CCCcccceeee--ecceecccccCCCchhhhHHHHHHHHHhcC-CCcCcceeEEEEEeC-----CeeeEEEecCCCCCHH
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESSDLGETLNLEEAKAVGNL-RSERLANLIGCCYEA-----DERLLVAEFMPNETLA 73 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~-----~~~~lv~e~~~~gsL~ 73 (424)
|++|.||.+.. .+..+++|++.........+.+|+.+++++ +||||+++++++... ...++||||+++|+|.
T Consensus 33 g~~~~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~e~~~l~~l~~h~ni~~~~~~~~~~~~~~~~~~~lv~ey~~~~sL~ 112 (291)
T cd06639 33 GTYGKVYKVTNKKDGSLAAVKILDPISDVDEEIEAEYNILQSLPNHPNVVKFYGMFYKADKLVGGQLWLVLELCNGGSVT 112 (291)
T ss_pred CCCeEEEEEEECCCCCEEEEEEecccccHHHHHHHHHHHHHHhcCCCCeEEEEEEEEeccccCCCeeEEEEEECCCCcHH
Confidence 78899999887 456677777765544456778899999999 899999999998754 3578999999999999
Q ss_pred hHhccC--CCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCC----CccccC
Q 014478 74 KHLFHW--ETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG----KSYSTN 147 (424)
Q Consensus 74 ~~l~~~--~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~----~~~~gt 147 (424)
+++... ....+++..++.++.|++.||.|||+.+ ++||||||+||+++.++.+||+|||++...... ....++
T Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~-ivH~dlkp~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~ 191 (291)
T cd06639 113 ELVKGLLICGQRLDEAMISYILYGALLGLQHLHNNR-IIHRDVKGNNILLTTEGGVKLVDFGVSAQLTSTRLRRNTSVGT 191 (291)
T ss_pred HHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCC-eeccCCCHHHEEEcCCCCEEEeecccchhcccccccccCccCC
Confidence 987521 2457899999999999999999999999 999999999999999999999999998764432 234678
Q ss_pred ccCCCccccccC-----CCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhc-ccCCCCCchhHHHHHHHH
Q 014478 148 LAFTPPEYMRTG-----RVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDS-ALEGHFSNDEGTELVRLA 221 (424)
Q Consensus 148 ~~y~aPE~~~~~-----~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~li 221 (424)
..|+|||++... .++.++|||||||++|+|++|+.|+...... ......... ......+...+..+.++|
T Consensus 192 ~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi~~el~~g~~p~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~l~~li 267 (291)
T cd06639 192 PFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELGDGDPPLFDMHPV----KTLFKIPRNPPPTLLHPEKWCRSFNHFI 267 (291)
T ss_pred ccccChhhhcCCCCcccccCCccchHHHHHHHHHHhhCCCCCCCCcHH----HHHHHHhcCCCCCCCcccccCHHHHHHH
Confidence 899999998643 3688999999999999999999887653111 111111111 111122344567899999
Q ss_pred HHhcccCcCCCCCHHHHHHH
Q 014478 222 SRCLQSEARERPNAKSLVIS 241 (424)
Q Consensus 222 ~~cl~~dp~~Rps~~~~~~~ 241 (424)
.+||+.+|++|||+.+++.+
T Consensus 268 ~~~l~~~p~~Rps~~~il~~ 287 (291)
T cd06639 268 SQCLIKDFEARPSVTHLLEH 287 (291)
T ss_pred HHHhhcChhhCcCHHHHhcC
Confidence 99999999999999999865
|
Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre |
| >cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-36 Score=278.15 Aligned_cols=233 Identities=19% Similarity=0.289 Sum_probs=188.5
Q ss_pred CCCcccceeee--ecceecccccCCCch---hhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHhHh
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESSDL---GETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHL 76 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~~~---~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~l 76 (424)
|++|.||.+.. .+..+++|++..... ....+.+|+.+++.++|+||+++++++...+..++|+||+++++|.+++
T Consensus 11 G~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~ 90 (264)
T cd06626 11 GTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNLVKYYGVEVHREKVYIFMEYCSGGTLEELL 90 (264)
T ss_pred CCCcEEEEEEECCCCcEEEEEEEECcccchHHHHHHHHHHHHHHhCCCCChhheeeeEecCCEEEEEEecCCCCcHHHHH
Confidence 88999999987 456677776654433 4678889999999999999999999999999999999999999999999
Q ss_pred ccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCCC--------ccccCc
Q 014478 77 FHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGK--------SYSTNL 148 (424)
Q Consensus 77 ~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~~--------~~~gt~ 148 (424)
.. +..+++..+..++.|++.||.|||+.+ ++|+||+|+||+++.++.+||+|||++....... ...++.
T Consensus 91 ~~--~~~~~~~~~~~i~~~i~~~l~~lh~~~-i~H~dl~~~nil~~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~~ 167 (264)
T cd06626 91 EH--GRILDEHVIRVYTLQLLEGLAYLHSHG-IVHRDIKPANIFLDHNGVIKLGDFGCAVKLKNNTTTMGEEVQSLAGTP 167 (264)
T ss_pred hh--cCCCChHHHHHHHHHHHHHHHHHHHCC-cccCCCCHHHEEECCCCCEEEcccccccccCCCCCcccccccCCcCCc
Confidence 64 446889999999999999999999999 9999999999999999999999999987654321 235678
Q ss_pred cCCCccccccCC---CCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhcccCCCCCc--hhHHHHHHHHHH
Q 014478 149 AFTPPEYMRTGR---VTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSN--DEGTELVRLASR 223 (424)
Q Consensus 149 ~y~aPE~~~~~~---~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~l~~li~~ 223 (424)
.|+|||++.+.. .+.++||||||+++|++++|..||...... . ..............+. .+++.+.+++.+
T Consensus 168 ~~~~PE~~~~~~~~~~~~~~Dv~s~G~il~~l~~g~~pf~~~~~~-~---~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ 243 (264)
T cd06626 168 AYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKRPWSELDNE-F---QIMFHVGAGHKPPIPDSLQLSPEGKDFLDR 243 (264)
T ss_pred CccChhhccCCCCCCCCcccchHHHHHHHHHHHhCCCCccCCcch-H---HHHHHHhcCCCCCCCcccccCHHHHHHHHH
Confidence 999999998766 888999999999999999999887543111 1 1111111111222233 347889999999
Q ss_pred hcccCcCCCCCHHHHHHH
Q 014478 224 CLQSEARERPNAKSLVIS 241 (424)
Q Consensus 224 cl~~dp~~Rps~~~~~~~ 241 (424)
||+.+|.+|||+.+++.+
T Consensus 244 ~l~~~p~~R~~~~~i~~~ 261 (264)
T cd06626 244 CLESDPKKRPTASELLQH 261 (264)
T ss_pred HccCCcccCCCHHHHhcC
Confidence 999999999999998753
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4 |
| >cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-36 Score=284.55 Aligned_cols=235 Identities=17% Similarity=0.181 Sum_probs=188.4
Q ss_pred CCCcccceeee--ecceecccccCC----CchhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHhH
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLES----SDLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKH 75 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~----~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~ 75 (424)
|++|.||.+.+ .+..++++.+.. .......+.+|+++++.++|+|++++++++......++||||+. |+|.++
T Consensus 26 g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~-~~l~~~ 104 (308)
T cd06634 26 GSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYCL-GSASDL 104 (308)
T ss_pred CCCEEEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCcccEEEEEEcCCeeEEEEEccC-CCHHHH
Confidence 78999999987 445566666542 22334578889999999999999999999999999999999996 588887
Q ss_pred hccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCCCccccCccCCCccc
Q 014478 76 LFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLAFTPPEY 155 (424)
Q Consensus 76 l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~gt~~y~aPE~ 155 (424)
+.. ...++++.++..++.|++.||.|||+.+ ++||||||+||+++.++.++|+|||++..........++..|+|||.
T Consensus 105 ~~~-~~~~l~~~~~~~~~~~l~~~l~~LH~~~-i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~y~aPE~ 182 (308)
T cd06634 105 LEV-HKKPLQEVEIAAVTHGALQGLAYLHSHN-MIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANXFVGTPYWMAPEV 182 (308)
T ss_pred HHH-cCCCCCHHHHHHHHHHHHHHHHHHHhCC-cccCCCCHHhEEECCCCcEEECCcccceeecCcccccCCccccCHHH
Confidence 753 2456899999999999999999999999 99999999999999999999999999887766666778999999999
Q ss_pred cc---cCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHHHHHHHHHhcccCcCCC
Q 014478 156 MR---TGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARER 232 (424)
Q Consensus 156 ~~---~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~R 232 (424)
+. .+.++.++|||||||++|+|++|..|+...... ...............+..++..+.++|.+||..+|++|
T Consensus 183 ~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~P~~R 258 (308)
T cd06634 183 ILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAM----SALYHIAQNESPALQSGHWSEYFRNFVDSCLQKIPQDR 258 (308)
T ss_pred HhhcccCCCCcccchHHHHHHHHHHHcCCCCCccccHH----HHHHHHhhcCCCCcCcccccHHHHHHHHHHhhCCcccC
Confidence 75 345788999999999999999999876543111 01111111111222234567889999999999999999
Q ss_pred CCHHHHHHHHH
Q 014478 233 PNAKSLVISLM 243 (424)
Q Consensus 233 ps~~~~~~~l~ 243 (424)
|++.+++.+..
T Consensus 259 p~~~~ll~~~~ 269 (308)
T cd06634 259 PTSEVLLKHRF 269 (308)
T ss_pred CCHHHHhhCcc
Confidence 99999997643
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin |
| >cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.5e-37 Score=288.43 Aligned_cols=240 Identities=16% Similarity=0.161 Sum_probs=185.7
Q ss_pred CCCcccceeee--ecceecccccCCCc---hhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHhHh
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESSD---LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHL 76 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~~---~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~l 76 (424)
|++|.||.+.+ .+..|++|++.... ...+.+.+|+.+++.++||||++++++|..++..++||||+.+++|.+++
T Consensus 11 ~~~~~v~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~~~~~~v~e~~~~~~l~~~l 90 (328)
T cd08226 11 CNLTSVYLARHTPTGTLVTVRITDLENCTEEHLKALQNEVVLSHFFRHPNIMTSWTVFTTGSWLWVISPFMAYGSANSLL 90 (328)
T ss_pred cCceeEEEEEEcCCCcEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceEeeeEecCCceEEEEecccCCCHHHHH
Confidence 57888999877 67888888775432 23467889999999999999999999999999999999999999999998
Q ss_pred ccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCC-----------Cccc
Q 014478 77 FHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG-----------KSYS 145 (424)
Q Consensus 77 ~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~-----------~~~~ 145 (424)
.......+++..+..++.|++.||.|||+++ ++||||||+||+++.++.++++||+.+...... ....
T Consensus 91 ~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~-ivHrDlkp~Nill~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (328)
T cd08226 91 KTYFPEGMSEALIGNILFGALRGLNYLHQNG-YIHRNIKASHILISGDGLVSLSGLSHLYSLVRNGQKAKVVYDFPQFST 169 (328)
T ss_pred HhhcccCCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCCHHHEEEeCCCcEEEechHHHhhhhccCcccccccccccccc
Confidence 7544456899999999999999999999999 999999999999999999999999854322110 1112
Q ss_pred cCccCCCccccccC--CCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhh-------------------------
Q 014478 146 TNLAFTPPEYMRTG--RVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFL------------------------- 198 (424)
Q Consensus 146 gt~~y~aPE~~~~~--~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~------------------------- 198 (424)
++..|+|||++.+. .++.++|||||||++|+|++|..||..............
T Consensus 170 ~~~~y~aPE~~~~~~~~~~~~~DiwslG~~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (328)
T cd08226 170 SVLPWLSPELLRQDLYGYNVKSDIYSVGITACELATGRVPFQDMLRTQMLLQKLKGPPYSPLDITTFPCEESRMKNSQSG 249 (328)
T ss_pred CccCccChhhhcCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCcChHHHHHHHhcCCCCCCccccccchhhhhhccchhh
Confidence 45679999999764 478899999999999999999988765321111000000
Q ss_pred ----------------HhhhcccCCCCCchhHHHHHHHHHHhcccCcCCCCCHHHHHHHH
Q 014478 199 ----------------LLMDSALEGHFSNDEGTELVRLASRCLQSEARERPNAKSLVISL 242 (424)
Q Consensus 199 ----------------~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~~~~~l 242 (424)
...........+..++..+.+|+.+||..||++|||+++++++-
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpta~e~l~~~ 309 (328)
T cd08226 250 VDSGIGESVVAAGMTQTMTSERLRTPSSKTFSPAFQNLVELCLQQDPEKRPSASSLLSHA 309 (328)
T ss_pred hhcccccchhccccccccccccccchhhhhhhHHHHHHHHHHccCCcccCCCHHHHhhCH
Confidence 00000011112234678899999999999999999999999763
|
Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig |
| >cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-37 Score=284.63 Aligned_cols=238 Identities=16% Similarity=0.190 Sum_probs=185.6
Q ss_pred CCCcccceeee--ecceecccccCCCch---hhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHhHh
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESSDL---GETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHL 76 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~~~---~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~l 76 (424)
|++|.||.+.+ .+..+++|++..+.. ....+.+|++++++++||||+++++++..++..++||||+. ++|..++
T Consensus 11 g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~-~~l~~~~ 89 (284)
T cd07860 11 GTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH-QDLKKFM 89 (284)
T ss_pred CCceEEEEEEECCCCCEEEEEEccccccccccchHHHHHHHHHHhcCCCCCcchhhhcccCCcEEEEeeccc-cCHHHHH
Confidence 78999999987 456677776643322 23578899999999999999999999999999999999996 5899988
Q ss_pred ccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCC----CccccCccCCC
Q 014478 77 FHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG----KSYSTNLAFTP 152 (424)
Q Consensus 77 ~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~----~~~~gt~~y~a 152 (424)
.......+++.++..++.|++.||.|||+.+ ++||||+|+||+++.++.+||+|||++...... ....++..|+|
T Consensus 90 ~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~-i~H~~l~p~nill~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~a 168 (284)
T cd07860 90 DASPLSGIPLPLIKSYLFQLLQGLAFCHSHR-VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRA 168 (284)
T ss_pred HhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCCHHHEEECCCCCEEEeeccchhhcccCccccccccccccccC
Confidence 6545567999999999999999999999999 999999999999999999999999998765432 22346788999
Q ss_pred ccccccCC-CCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhH-----------------hhhc---ccC---CC
Q 014478 153 PEYMRTGR-VTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLL-----------------LMDS---ALE---GH 208 (424)
Q Consensus 153 PE~~~~~~-~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~-----------------~~~~---~~~---~~ 208 (424)
||++.+.. ++.++||||||+++|+|+||+.||+.............. .... ... ..
T Consensus 169 PE~~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (284)
T cd07860 169 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSLPDYKPSFPKWARQDFSK 248 (284)
T ss_pred CeEEecCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhhhhHHHHHHhhcccccccCHHH
Confidence 99987654 588999999999999999999888654211110000000 0000 000 00
Q ss_pred CCchhHHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 014478 209 FSNDEGTELVRLASRCLQSEARERPNAKSLVIS 241 (424)
Q Consensus 209 ~~~~~~~~l~~li~~cl~~dp~~Rps~~~~~~~ 241 (424)
....+++++.++|.+||+.||++|||+++++.+
T Consensus 249 ~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~ 281 (284)
T cd07860 249 VVPPLDEDGRDLLSQMLHYDPNKRISAKAALAH 281 (284)
T ss_pred HcccCCHHHHHHHHHhcCCCcccCCCHHHHhcC
Confidence 112356788999999999999999999999854
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex |
| >cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-36 Score=280.32 Aligned_cols=231 Identities=16% Similarity=0.248 Sum_probs=187.6
Q ss_pred CCCcccceeee--ecceecccccCCC--chhhhHHHHHHHHHhcCC---CcCcceeEEEEEeCCeeeEEEecCCCCCHHh
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESS--DLGETLNLEEAKAVGNLR---SERLANLIGCCYEADERLLVAEFMPNETLAK 74 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~--~~~~~~~~~E~~~l~~l~---h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~ 74 (424)
|++|.||.+.+ .+..+++|.+... ......+.+|+.++++++ ||||+++++++..+...++||||+++++|.+
T Consensus 12 g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~~~~~~lv~e~~~~~~L~~ 91 (277)
T cd06917 12 GAYGAVYRGKHVPTGRVVALKIINLDTPDDDVSDIQREVALLSQLRQSQPPNITKYYGSYLKGPRLWIIMEYAEGGSVRT 91 (277)
T ss_pred cCCceEEEEEEcCCCcEEEEEEecCCCCchhHHHHHHHHHHHHHhccCCCCCeeeEeeeeeeCCEEEEEEecCCCCcHHH
Confidence 89999999987 4566777766433 334567889999999996 9999999999999999999999999999999
Q ss_pred HhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCC----CccccCccC
Q 014478 75 HLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG----KSYSTNLAF 150 (424)
Q Consensus 75 ~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~----~~~~gt~~y 150 (424)
++.. ..+++..++.++.|++.||.|||+.+ ++||||+|+||+++.++.++|+|||++...... ....|+..|
T Consensus 92 ~~~~---~~l~~~~~~~i~~~i~~~l~~lh~~~-i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y 167 (277)
T cd06917 92 LMKA---GPIAEKYISVIIREVLVALKYIHKVG-VIHRDIKAANILVTNTGNVKLCDFGVAALLNQNSSKRSTFVGTPYW 167 (277)
T ss_pred HHHc---cCCCHHHHHHHHHHHHHHHHHHHhCC-cccCCcCHHHEEEcCCCCEEEccCCceeecCCCccccccccCCcce
Confidence 9853 47899999999999999999999999 999999999999999999999999998765433 234678899
Q ss_pred CCccccccC-CCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhcccCCCCCc-hhHHHHHHHHHHhcccC
Q 014478 151 TPPEYMRTG-RVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSN-DEGTELVRLASRCLQSE 228 (424)
Q Consensus 151 ~aPE~~~~~-~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~li~~cl~~d 228 (424)
+|||.+.++ .++.++|+||||+++|+|++|..||...... ..............+. ..+.++.+++.+||..|
T Consensus 168 ~aPE~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~ 242 (277)
T cd06917 168 MAPEVITEGKYYDTKADIWSLGITIYEMATGNPPYSDVDAF-----RAMMLIPKSKPPRLEDNGYSKLLREFVAACLDEE 242 (277)
T ss_pred eCHHHhccCCccccchhHHHHHHHHHHHHhCCCCCCCCChh-----hhhhccccCCCCCCCcccCCHHHHHHHHHHcCCC
Confidence 999998754 4688999999999999999999887643111 1111111111112222 26778999999999999
Q ss_pred cCCCCCHHHHHHH
Q 014478 229 ARERPNAKSLVIS 241 (424)
Q Consensus 229 p~~Rps~~~~~~~ 241 (424)
|++||++.+++.+
T Consensus 243 p~~R~~~~~il~~ 255 (277)
T cd06917 243 PKERLSAEELLKS 255 (277)
T ss_pred cccCcCHHHHhhC
Confidence 9999999999875
|
Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent |
| >cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-36 Score=277.94 Aligned_cols=235 Identities=17% Similarity=0.252 Sum_probs=193.8
Q ss_pred CCCcccceeeee--cceecccccCCCc--hhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHhHhc
Q 014478 2 GGRCSKFSICWF--HCHLKSSVLESSD--LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLF 77 (424)
Q Consensus 2 G~~g~v~~~~~~--~~~v~~~~~~~~~--~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~ 77 (424)
||+|.||.+... +..+++|++.... .....+.+|++.+.+++|+||+++++++..+...++||||+++++|.+++.
T Consensus 12 g~~~~v~~~~~~~~~~~~~vk~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~ 91 (264)
T cd06623 12 GSSGVVYKVRHKPTGKIYALKKIHVDGDEEFRKQLLRELKTLRSCESPYVVKCYGAFYKEGEISIVLEYMDGGSLADLLK 91 (264)
T ss_pred cCCeEEEEEEEcCCCcEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCeeeEEEEEccCCeEEEEEEecCCCcHHHHHH
Confidence 789999999874 6667777765544 346789999999999999999999999999999999999999999999996
Q ss_pred cCCCCCCCHHHHHHHHHHHHHHHHHHHh-CCCcccccCCCCCeeecCCCCeEEccccccccCCCCC----ccccCccCCC
Q 014478 78 HWETQPMKWAMRLRVALYLAQALEYCSS-KGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGK----SYSTNLAFTP 152 (424)
Q Consensus 78 ~~~~~~l~~~~~~~i~~qi~~~L~~lH~-~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~~----~~~gt~~y~a 152 (424)
. ..++++..++.++.|++.||.|||+ .+ ++||||+|+||+++.++.++|+|||.+....... ...++..|+|
T Consensus 92 ~--~~~l~~~~~~~~~~~l~~~l~~lh~~~~-~~H~~l~~~ni~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~~ 168 (264)
T cd06623 92 K--VGKIPEPVLAYIARQILKGLDYLHTKRH-IIHRDIKPSNLLINSKGEVKIADFGISKVLENTLDQCNTFVGTVTYMS 168 (264)
T ss_pred H--cCCCCHHHHHHHHHHHHHHHHHHhccCC-CccCCCCHHHEEECCCCCEEEccCccceecccCCCcccceeecccccC
Confidence 4 3678999999999999999999999 99 9999999999999999999999999988655332 3357889999
Q ss_pred ccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhcccCCCCCch-hHHHHHHHHHHhcccCcCC
Q 014478 153 PEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSND-EGTELVRLASRCLQSEARE 231 (424)
Q Consensus 153 PE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~li~~cl~~dp~~ 231 (424)
||.+.+..++.++|+||||+++|+|++|..|+...... ........+........+.. ++..+.+++.+||..+|++
T Consensus 169 pE~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~ 246 (264)
T cd06623 169 PERIQGESYSYAADIWSLGLTLLECALGKFPFLPPGQP--SFFELMQAICDGPPPSLPAEEFSPEFRDFISACLQKDPKK 246 (264)
T ss_pred HhhhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccccc--CHHHHHHHHhcCCCCCCCcccCCHHHHHHHHHHccCChhh
Confidence 99999888999999999999999999999887554210 00111111112222233444 7789999999999999999
Q ss_pred CCCHHHHHHH
Q 014478 232 RPNAKSLVIS 241 (424)
Q Consensus 232 Rps~~~~~~~ 241 (424)
|||+.+++++
T Consensus 247 R~~~~~ll~~ 256 (264)
T cd06623 247 RPSAAELLQH 256 (264)
T ss_pred CCCHHHHHhC
Confidence 9999999875
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of |
| >cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-36 Score=281.05 Aligned_cols=240 Identities=15% Similarity=0.193 Sum_probs=187.2
Q ss_pred CCCcccceeee--ecceecccccCCCc--hhhhHHHHHHHHHhcCCCcCcceeEEEEEeC--CeeeEEEecCCCCCHHhH
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESSD--LGETLNLEEAKAVGNLRSERLANLIGCCYEA--DERLLVAEFMPNETLAKH 75 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~~--~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~--~~~~lv~e~~~~gsL~~~ 75 (424)
|++|.||.+.. .+..+++|.+.... .....+.+|++++++++||||++++++|... ...++||||+++++|.++
T Consensus 12 g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~L~~~ 91 (287)
T cd06621 12 GAGGSVTKCRLKNTGMIFALKTITTDPNPDLQKQILRELEINKSCKSPYIVKYYGAFLDESSSSIGIAMEYCEGGSLDSI 91 (287)
T ss_pred CCceEEEEEEECCCCeEEEEEEEecCCchHHHHHHHHHHHHHHhCCCCCeeeeeeEEEccCCCeEEEEEEecCCCCHHHH
Confidence 78899999987 45666777665432 3456789999999999999999999998653 468999999999999988
Q ss_pred hccC--CCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCC--CccccCccCC
Q 014478 76 LFHW--ETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG--KSYSTNLAFT 151 (424)
Q Consensus 76 l~~~--~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~--~~~~gt~~y~ 151 (424)
+... ....++...+..++.|++.||.|||+.+ ++|+||+|+||+++.++.++|+|||++...... ....++..|+
T Consensus 92 l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~-i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~y~ 170 (287)
T cd06621 92 YKKVKKRGGRIGEKVLGKIAESVLKGLSYLHSRK-IIHRDIKPSNILLTRKGQVKLCDFGVSGELVNSLAGTFTGTSFYM 170 (287)
T ss_pred HHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCCHHHEEEecCCeEEEeeccccccccccccccccCCcccc
Confidence 6421 3456889999999999999999999999 999999999999999999999999998754432 2345788999
Q ss_pred CccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhc----ccCCCCC--chhHHHHHHHHHHhc
Q 014478 152 PPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDS----ALEGHFS--NDEGTELVRLASRCL 225 (424)
Q Consensus 152 aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~--~~~~~~l~~li~~cl 225 (424)
|||.+.+..++.++|||||||++|+|++|..|+................... ....... ...++.+.+++.+||
T Consensus 171 ~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l 250 (287)
T cd06621 171 APERIQGKPYSITSDVWSLGLTLLEVAQNRFPFPPEGEPPLGPIELLSYIVNMPNPELKDEPGNGIKWSEEFKDFIKQCL 250 (287)
T ss_pred CHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCcccCCCCChHHHHHHHhcCCchhhccCCCCCCchHHHHHHHHHHHc
Confidence 9999998889999999999999999999998876531100000001111111 1111111 235678999999999
Q ss_pred ccCcCCCCCHHHHHHHH
Q 014478 226 QSEARERPNAKSLVISL 242 (424)
Q Consensus 226 ~~dp~~Rps~~~~~~~l 242 (424)
..||++|||+.+++.+-
T Consensus 251 ~~~p~~Rpt~~eil~~~ 267 (287)
T cd06621 251 EKDPTRRPTPWDMLEHP 267 (287)
T ss_pred CCCcccCCCHHHHHhCc
Confidence 99999999999999753
|
Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include |
| >cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.1e-37 Score=282.56 Aligned_cols=236 Identities=17% Similarity=0.211 Sum_probs=186.5
Q ss_pred CCCcccceeee--ecceecccccCCCc---hhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHhHh
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESSD---LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHL 76 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~~---~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~l 76 (424)
|++|.||.+.+ .+..+++|++.... .....+.+|+.++++++||||+++++++..+...++||||+ +++|.+++
T Consensus 11 g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~ 89 (286)
T cd07832 11 GAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQACQHPYVVKLLDVFPHGSGFVLVMEYM-PSDLSEVL 89 (286)
T ss_pred CCCcEEEEEEECCCCceEEEEEEEcccccchhhHHHHHHHHHHHhCCCCCCcceeeEEecCCeeEEEeccc-CCCHHHHH
Confidence 88999999987 45667777765433 23567899999999999999999999999999999999999 99999998
Q ss_pred ccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCCC-----ccccCccCC
Q 014478 77 FHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGK-----SYSTNLAFT 151 (424)
Q Consensus 77 ~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~~-----~~~gt~~y~ 151 (424)
.. ...++++.+++.++.||+.||.|||+.+ ++|+||||+||+++.++.++|+|||++....... ...++..|+
T Consensus 90 ~~-~~~~~~~~~~~~~~~~i~~~l~~lH~~~-i~H~dl~p~ni~~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~ 167 (286)
T cd07832 90 RD-EERPLPEAQVKSYMRMLLKGVAYMHANG-IMHRDLKPANLLISADGVLKIADFGLARLFSEEEPRLYSHQVATRWYR 167 (286)
T ss_pred Hh-cCCCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCcCHHHEEEcCCCcEEEeeeeecccccCCCCCccccccCccccc
Confidence 65 2467999999999999999999999999 9999999999999999999999999988655332 345788999
Q ss_pred CccccccC-CCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhh-----------------c-ccC------
Q 014478 152 PPEYMRTG-RVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMD-----------------S-ALE------ 206 (424)
Q Consensus 152 aPE~~~~~-~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~-----------------~-~~~------ 206 (424)
|||++.+. .++.++||||||+++|+|++|..++........-. ....... . ...
T Consensus 168 aPE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (286)
T cd07832 168 APELLYGARKYDPGVDLWAVGCIFAELLNGSPLFPGENDIEQLA-IVFRTLGTPNEETWPGLTSLPDYNKITFPESKPIP 246 (286)
T ss_pred CceeeeccccCCchhHHHHHHHHHHHHHcCCcCcCCCCHHHHHH-HHHHHcCCCChHHHhhccCcchhhcccCCCCCcch
Confidence 99998754 46889999999999999999976665432110000 0000000 0 000
Q ss_pred -CCCCchhHHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 014478 207 -GHFSNDEGTELVRLASRCLQSEARERPNAKSLVIS 241 (424)
Q Consensus 207 -~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~~~~~ 241 (424)
.......+..+.+++.+||..||++|||+++++.+
T Consensus 247 ~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~h 282 (286)
T cd07832 247 LEEIFPDASPEALDLLKGLLVYDPSKRLSAAEALRH 282 (286)
T ss_pred HHHhCCCccHHHHHHHHHHhccChhhCCCHHHHhhC
Confidence 00112346889999999999999999999999865
|
Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea |
| >cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.2e-37 Score=286.85 Aligned_cols=237 Identities=17% Similarity=0.179 Sum_probs=183.4
Q ss_pred cccceeeeecceecccccCCC---chhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHhHhccCCC
Q 014478 5 CSKFSICWFHCHLKSSVLESS---DLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWET 81 (424)
Q Consensus 5 g~v~~~~~~~~~v~~~~~~~~---~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~ 81 (424)
+.++.....+..+++|++... ....+.+.+|+++++.++||||+++++++...+..+++|||+++|+|.+++.....
T Consensus 16 v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~l~~~~~ 95 (314)
T cd08216 16 VHLAKHKPTNTLVAVKKINLDSCSKEDLKLLQQEIITSRQLQHPNILPYVTSFIVDSELYVVSPLMAYGSCEDLLKTHFP 95 (314)
T ss_pred EEEEEecCCCCEEEEEEEeccccchhHHHHHHHHHHHHHhcCCcchhhhhheeecCCeEEEEEeccCCCCHHHHHHHhcc
Confidence 344444456778888877543 34456899999999999999999999999999999999999999999999975445
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCC-----------CccccCccC
Q 014478 82 QPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG-----------KSYSTNLAF 150 (424)
Q Consensus 82 ~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~-----------~~~~gt~~y 150 (424)
..+++..+..++.|++.||.|||+++ |+||||||+||+++.++.+||+|||.+...... ....++..|
T Consensus 96 ~~~~~~~~~~~~~~l~~~L~~LH~~~-ivH~dlk~~Nili~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y 174 (314)
T cd08216 96 EGLPELAIAFILKDVLNALDYIHSKG-FIHRSVKASHILLSGDGKVVLSGLRYSVSMIKHGKRQRVVHDFPKSSVKNLPW 174 (314)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCCcceEEEecCCceEEecCccceeeccccccccccccccccccccccc
Confidence 57899999999999999999999999 999999999999999999999999987644221 123457789
Q ss_pred CCccccccC--CCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhh----Hhhh----------------------
Q 014478 151 TPPEYMRTG--RVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFL----LLMD---------------------- 202 (424)
Q Consensus 151 ~aPE~~~~~--~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~----~~~~---------------------- 202 (424)
+|||.+... .++.++|+|||||++|||++|..||.............. ....
T Consensus 175 ~aPE~~~~~~~~~~~~~Diws~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (314)
T cd08216 175 LSPEVLQQNLQGYNEKSDIYSVGITACELANGHVPFKDMPATQMLLEKVRGTVPCLLDKSTYPLYEDSMSQSRSSNEHPN 254 (314)
T ss_pred cCHHHhcCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCccccccCchhhhcCCcCcccccccccc
Confidence 999998753 478899999999999999999988765321111000000 0000
Q ss_pred --cccCCCCCchhHHHHHHHHHHhcccCcCCCCCHHHHHHHH
Q 014478 203 --SALEGHFSNDEGTELVRLASRCLQSEARERPNAKSLVISL 242 (424)
Q Consensus 203 --~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~~~~~l 242 (424)
.......+...+.++.+++.+||..||++|||+++++++-
T Consensus 255 ~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~p 296 (314)
T cd08216 255 NRDSVDHPYTRTFSEHFHQFVELCLQRDPESRPSASQLLNHS 296 (314)
T ss_pred hhhhhhcchhhHHHHHHHHHHHHHhhcCCCcCcCHHHHhcCc
Confidence 0000111223467899999999999999999999999763
|
Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc |
| >cd05122 PKc_STE Catalytic domain of STE family Protein Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-36 Score=274.90 Aligned_cols=233 Identities=20% Similarity=0.251 Sum_probs=192.4
Q ss_pred CCCcccceeeee--cceecccccCCCch-hhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHhHhcc
Q 014478 2 GGRCSKFSICWF--HCHLKSSVLESSDL-GETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFH 78 (424)
Q Consensus 2 G~~g~v~~~~~~--~~~v~~~~~~~~~~-~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~ 78 (424)
|++|.||.+.+. +..+++|++..... ....+.+|+++++.++|+||+++++++..+...++++||+++++|.+++..
T Consensus 11 g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~~~~ 90 (253)
T cd05122 11 GGFGEVYKARHKRTGKEVAIKVIKLESKEKKEKIINEIQILKKCKHPNIVKYYGSYLKKDELWIVMEFCSGGSLKDLLKS 90 (253)
T ss_pred CCceEEEEEEECCCCcEEEEEEecccchhHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEecCCCCcHHHHHhh
Confidence 788999999984 66677777765543 567889999999999999999999999999999999999999999999865
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCC---CccccCccCCCccc
Q 014478 79 WETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG---KSYSTNLAFTPPEY 155 (424)
Q Consensus 79 ~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~---~~~~gt~~y~aPE~ 155 (424)
. ...+++..+..++.|++.+|.+||+++ ++||||+|+||+++.++.++|+|||.+...... ....++..|+|||.
T Consensus 91 ~-~~~~~~~~~~~i~~~i~~~l~~lh~~~-i~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~PE~ 168 (253)
T cd05122 91 T-NQTLTESQIAYVCKELLKGLEYLHSNG-IIHRDIKAANILLTSDGEVKLIDFGLSAQLSDTKARNTMVGTPYWMAPEV 168 (253)
T ss_pred c-CCCCCHHHHHHHHHHHHHHHHHhhcCC-EecCCCCHHHEEEccCCeEEEeeccccccccccccccceecCCcccCHHH
Confidence 2 257899999999999999999999999 999999999999999999999999998876654 34567889999999
Q ss_pred cccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhcccCCCC--CchhHHHHHHHHHHhcccCcCCCC
Q 014478 156 MRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHF--SNDEGTELVRLASRCLQSEARERP 233 (424)
Q Consensus 156 ~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~li~~cl~~dp~~Rp 233 (424)
+.+...+.++|+||||+++|+|++|..|+.......... .... ...... +..++..+.+++.+||+.||++||
T Consensus 169 ~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~----~~~~-~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~ 243 (253)
T cd05122 169 INGKPYDYKADIWSLGITAIELAEGKPPYSELPPMKALF----KIAT-NGPPGLRNPEKWSDEFKDFLKKCLQKNPEKRP 243 (253)
T ss_pred HcCCCCCccccHHHHHHHHHHHHhCCCCCCCCchHHHHH----HHHh-cCCCCcCcccccCHHHHHHHHHHccCChhhCC
Confidence 998888999999999999999999998776531111100 0111 111112 222377899999999999999999
Q ss_pred CHHHHHHH
Q 014478 234 NAKSLVIS 241 (424)
Q Consensus 234 s~~~~~~~ 241 (424)
|+.+++.+
T Consensus 244 t~~~~l~~ 251 (253)
T cd05122 244 TAEQLLKH 251 (253)
T ss_pred CHHHHhcC
Confidence 99999854
|
Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core |
| >cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.6e-37 Score=284.11 Aligned_cols=232 Identities=17% Similarity=0.250 Sum_probs=188.8
Q ss_pred CCCcccceeee--ecceecccccCCCc-hhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHhHhcc
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESSD-LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFH 78 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~ 78 (424)
|++|.||++.. .+..+++|.+.... ...+.+.+|+.+++.++||||+++++++...+..++|+||+++++|.+++.+
T Consensus 30 g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~ 109 (293)
T cd06647 30 GASGTVYTAIDVATGQEVAIKQMNLQQQPKKELIINEILVMRENKHPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTE 109 (293)
T ss_pred CCCeEEEEEEEcCCCCEEEEEEeccccchHHHHHHHHHHHHhhcCCCCeeehhheeeeCCcEEEEEecCCCCcHHHHHhh
Confidence 78999999976 45667777765332 3456788999999999999999999999999999999999999999999853
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCC----CccccCccCCCcc
Q 014478 79 WETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG----KSYSTNLAFTPPE 154 (424)
Q Consensus 79 ~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~----~~~~gt~~y~aPE 154 (424)
..+++.++..++.|++.||.|||+++ ++||||||+||+++.++.++|+|||++...... ....+++.|++||
T Consensus 110 ---~~l~~~~~~~i~~~l~~al~~LH~~g-i~H~dL~p~Nili~~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~y~~PE 185 (293)
T cd06647 110 ---TCMDEGQIAAVCRECLQALEFLHSNQ-VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPE 185 (293)
T ss_pred ---cCCCHHHHHHHHHHHHHHHHHHHhCC-EeeccCCHHHEEEcCCCCEEEccCcceecccccccccccccCChhhcCch
Confidence 46889999999999999999999999 999999999999999999999999987654432 2335788899999
Q ss_pred ccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhh-hcccCCCCCchhHHHHHHHHHHhcccCcCCCC
Q 014478 155 YMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLM-DSALEGHFSNDEGTELVRLASRCLQSEARERP 233 (424)
Q Consensus 155 ~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rp 233 (424)
.+.++.++.++|+||||+++|++++|..||...... ....... ........+...+..+.+++.+||..+|++||
T Consensus 186 ~~~~~~~~~~~Dv~slG~ll~~ll~g~~pf~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rp 261 (293)
T cd06647 186 VVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPL----RALYLIATNGTPELQNPEKLSAIFRDFLNRCLEMDVEKRG 261 (293)
T ss_pred hhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChh----hheeehhcCCCCCCCCccccCHHHHHHHHHHccCChhhCc
Confidence 998888899999999999999999999887653111 0111111 11111122334567899999999999999999
Q ss_pred CHHHHHHH
Q 014478 234 NAKSLVIS 241 (424)
Q Consensus 234 s~~~~~~~ 241 (424)
++.+++.+
T Consensus 262 ~~~~il~h 269 (293)
T cd06647 262 SAKELLQH 269 (293)
T ss_pred CHHHHhcC
Confidence 99999976
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi |
| >cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-36 Score=283.60 Aligned_cols=233 Identities=18% Similarity=0.208 Sum_probs=187.4
Q ss_pred CCCcccceeee--ecceecccccCCCc----hhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHhH
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESSD----LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKH 75 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~~----~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~ 75 (424)
|++|.||.+.+ .+..++++++.... .....+.+|+++++.++|||++++++++.+....++||||+. |+|.++
T Consensus 32 g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~-~~l~~~ 110 (313)
T cd06633 32 GSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNTIEYKGCYLKEHTAWLVMEYCL-GSASDL 110 (313)
T ss_pred CCCeEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEEecCC-CCHHHH
Confidence 78999999986 56667777664322 234567889999999999999999999999999999999996 478887
Q ss_pred hccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCCCccccCccCCCccc
Q 014478 76 LFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLAFTPPEY 155 (424)
Q Consensus 76 l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~gt~~y~aPE~ 155 (424)
+.. ...++++.++..++.|++.+|.|||+++ ++||||+|+||+++.++.+||+|||++..........++..|+|||+
T Consensus 111 l~~-~~~~l~~~~~~~~~~qi~~al~~LH~~g-i~H~dl~p~nili~~~~~~kL~dfg~~~~~~~~~~~~~~~~y~aPE~ 188 (313)
T cd06633 111 LEV-HKKPLQEVEIAAITHGALQGLAYLHSHN-MIHRDIKAGNILLTEPGQVKLADFGSASKSSPANSFVGTPYWMAPEV 188 (313)
T ss_pred HHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCChhhEEECCCCCEEEeecCCCcccCCCCCccccccccChhh
Confidence 754 3457899999999999999999999999 99999999999999999999999999877665566678999999999
Q ss_pred cc---cCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHHHHHHHHHhcccCcCCC
Q 014478 156 MR---TGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARER 232 (424)
Q Consensus 156 ~~---~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~R 232 (424)
+. .+.++.++|||||||++|+|++|..|+........ ................++..+.+++.+||+.+|.+|
T Consensus 189 ~~~~~~~~~~~~sDv~slGvil~el~~g~~p~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~R 264 (313)
T cd06633 189 ILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSA----LYHIAQNDSPTLQSNEWTDSFRGFVDYCLQKIPQER 264 (313)
T ss_pred ccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHH----HHHHHhcCCCCCCccccCHHHHHHHHHHccCChhhC
Confidence 84 35688899999999999999999987755311110 111111111122233456789999999999999999
Q ss_pred CCHHHHHHH
Q 014478 233 PNAKSLVIS 241 (424)
Q Consensus 233 ps~~~~~~~ 241 (424)
|++.+++.+
T Consensus 265 p~~~~~l~~ 273 (313)
T cd06633 265 PASAELLRH 273 (313)
T ss_pred cCHHHHhcC
Confidence 999999854
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co |
| >PHA03210 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.7e-37 Score=304.07 Aligned_cols=212 Identities=18% Similarity=0.201 Sum_probs=162.0
Q ss_pred hhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHhHhccCC---CCCCCHHHHHHHHHHHHHHHHHHH
Q 014478 28 GETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWE---TQPMKWAMRLRVALYLAQALEYCS 104 (424)
Q Consensus 28 ~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~---~~~l~~~~~~~i~~qi~~~L~~lH 104 (424)
....+.+|+++|++++||||+++++++...+..++|||++. ++|.+++.... .......++..++.||+.||.|||
T Consensus 206 ~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH 284 (501)
T PHA03210 206 AAIQLENEILALGRLNHENILKIEEILRSEANTYMITQKYD-FDLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIH 284 (501)
T ss_pred HHHHHHHHHHHHHhCCCCCcCcEeEEEEECCeeEEEEeccc-cCHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHH
Confidence 45578899999999999999999999999999999999995 47877764321 122345678889999999999999
Q ss_pred hCCCcccccCCCCCeeecCCCCeEEccccccccCCCCC-----ccccCccCCCccccccCCCCCCcceehhHHHHHHHhh
Q 014478 105 SKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGK-----SYSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLS 179 (424)
Q Consensus 105 ~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~~-----~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~ 179 (424)
+++ ||||||||+|||++.++.+||+|||+++...... ...||..|+|||++.+..++.++|||||||++|||++
T Consensus 285 ~~g-IiHrDLKP~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~ 363 (501)
T PHA03210 285 DKK-LIHRDIKLENIFLNCDGKIVLGDFGTAMPFEKEREAFDYGWVGTVATNSPEILAGDGYCEITDIWSCGLILLDMLS 363 (501)
T ss_pred hCC-eecCCCCHHHEEECCCCCEEEEeCCCceecCcccccccccccCCcCCCCchhhcCCCCCcHHHHHHHHHHHHHHHH
Confidence 999 9999999999999999999999999998654322 3468999999999998889999999999999999999
Q ss_pred CCCCCCchhhH-----HHhhh---------------hhhHhhhcccCC----CC-----CchhHHHHHHHHHHhcccCcC
Q 014478 180 GKHIPPSHALD-----LIRSK---------------NFLLLMDSALEG----HF-----SNDEGTELVRLASRCLQSEAR 230 (424)
Q Consensus 180 g~~~~~~~~~~-----~~~~~---------------~~~~~~~~~~~~----~~-----~~~~~~~l~~li~~cl~~dp~ 230 (424)
|..++...... ..... .....+...... .. ...++.++.++|.+||..||.
T Consensus 364 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~li~kmL~~DP~ 443 (501)
T PHA03210 364 HDFCPIGDGGGKPGKQLLKIIDSLSVCDEEFPDPPCKLFDYIDSAEIDHAGHSVPPLIRNLGLPADFEYPLVKMLTFDWH 443 (501)
T ss_pred CCCCCccCCCCCHHHHHHHHHHhcccChhhcCCcHHHHHHHhhhhhcccCccchhhHHHhcCCChHHHHHHHHHhccCcc
Confidence 98544322100 00000 000000000000 00 012345678889999999999
Q ss_pred CCCCHHHHHHH
Q 014478 231 ERPNAKSLVIS 241 (424)
Q Consensus 231 ~Rps~~~~~~~ 241 (424)
+|||+.|++.+
T Consensus 444 ~Rpsa~elL~h 454 (501)
T PHA03210 444 LRPGAAELLAL 454 (501)
T ss_pred cCcCHHHHhhC
Confidence 99999999976
|
|
| >cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-36 Score=281.71 Aligned_cols=237 Identities=15% Similarity=0.203 Sum_probs=181.5
Q ss_pred CCCcccceeee--ecceecccccCCCch--hhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHhHhc
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESSDL--GETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLF 77 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~~~--~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~ 77 (424)
|++|.||.+.. .+..+++|.+..... ....+.+|++++++++||||+++++++..++..++||||+++ +|.+++.
T Consensus 16 g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~-~L~~~~~ 94 (291)
T cd07844 16 GSYATVYKGRSKLTGQLVALKEIRLEHEEGAPFTAIREASLLKDLKHANIVTLHDIIHTKKTLTLVFEYLDT-DLKQYMD 94 (291)
T ss_pred cCCeEEEEEEEcCCCcEEEEEEEecccccCCchhHHHHHHHHhhCCCcceeeEEEEEecCCeEEEEEecCCC-CHHHHHH
Confidence 78999999987 456677777654322 234577899999999999999999999999999999999985 9999886
Q ss_pred cCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCC----CccccCccCCCc
Q 014478 78 HWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG----KSYSTNLAFTPP 153 (424)
Q Consensus 78 ~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~----~~~~gt~~y~aP 153 (424)
.. ...+++..+..++.|++.||.|||+++ ++||||||+||+++.++.+||+|||+++..... ....++..|+||
T Consensus 95 ~~-~~~~~~~~~~~~~~ql~~al~~lH~~~-i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~aP 172 (291)
T cd07844 95 DC-GGGLSMHNVRLFLFQLLRGLAYCHQRR-VLHRDLKPQNLLISERGELKLADFGLARAKSVPSKTYSNEVVTLWYRPP 172 (291)
T ss_pred hC-CCCCCHHHHHHHHHHHHHHHHHHHhCC-eecccCCHHHEEEcCCCCEEECccccccccCCCCccccccccccccCCc
Confidence 52 347899999999999999999999999 999999999999999999999999998754321 223467889999
Q ss_pred ccccc-CCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhc------------------ccCC-------
Q 014478 154 EYMRT-GRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDS------------------ALEG------- 207 (424)
Q Consensus 154 E~~~~-~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~------------------~~~~------- 207 (424)
|++.+ ..++.++||||||+++|+|++|..||................... ....
T Consensus 173 E~~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (291)
T cd07844 173 DVLLGSTEYSTSLDMWGVGCIFYEMATGRPLFPGSTDVEDQLHKIFRVLGTPTEETWPGVSSNPEFKPYSFPFYPPRPLI 252 (291)
T ss_pred HHhhcCcccCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHhcCCCChhhhhhhhhccccccccccccCChhHH
Confidence 99875 457889999999999999999998875432000000000000000 0000
Q ss_pred CCCchhH--HHHHHHHHHhcccCcCCCCCHHHHHHH
Q 014478 208 HFSNDEG--TELVRLASRCLQSEARERPNAKSLVIS 241 (424)
Q Consensus 208 ~~~~~~~--~~l~~li~~cl~~dp~~Rps~~~~~~~ 241 (424)
......+ .++.+++.+||..||.+|||+.+++.+
T Consensus 253 ~~~~~~~~~~~~~~li~~~L~~~p~~Rps~~e~l~~ 288 (291)
T cd07844 253 NHAPRLDRIPHGEELALKFLQYEPKKRISAAEAMKH 288 (291)
T ss_pred HhCcCCCCchhHHHHHHHHhccCcccccCHHHHhcC
Confidence 0001122 678899999999999999999998753
|
Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the |
| >cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-36 Score=283.65 Aligned_cols=237 Identities=19% Similarity=0.153 Sum_probs=184.4
Q ss_pred CCCcccceeee--ecceecccccCCCch------hhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHH
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESSDL------GETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLA 73 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~~~------~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~ 73 (424)
|++|.||++.+ .+..+++|.+..... ....+..|++++++++|+||+++++++.+.+..++||||+ +|+|.
T Consensus 11 g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~-~~~L~ 89 (298)
T cd07841 11 GTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIGLLDVFGHKSNINLVFEFM-ETDLE 89 (298)
T ss_pred ccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCChhhhheeecCCEEEEEEccc-CCCHH
Confidence 88999999987 456788777754432 2345678999999999999999999999988999999999 88999
Q ss_pred hHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCCC----ccccCcc
Q 014478 74 KHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGK----SYSTNLA 149 (424)
Q Consensus 74 ~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~~----~~~gt~~ 149 (424)
+++... ...+++..++.++.||++||.|||+++ ++||||||+||+++.++.++|+|||+++...... ...++..
T Consensus 90 ~~i~~~-~~~~~~~~~~~~~~qi~~al~~lH~~~-i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~ 167 (298)
T cd07841 90 KVIKDK-SIVLTPADIKSYMLMTLRGLEYLHSNW-ILHRDLKPNNLLIASDGVLKLADFGLARSFGSPNRKMTHQVVTRW 167 (298)
T ss_pred HHHhcc-CCCCCHHHHHHHHHHHHHHHHHHHhCC-eeecCCChhhEEEcCCCCEEEccceeeeeccCCCcccccccccee
Confidence 999652 247999999999999999999999999 9999999999999999999999999988665432 2345788
Q ss_pred CCCcccccc-CCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhh--------------hc---ccC-----
Q 014478 150 FTPPEYMRT-GRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLM--------------DS---ALE----- 206 (424)
Q Consensus 150 y~aPE~~~~-~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~--------------~~---~~~----- 206 (424)
|+|||.+.+ ..++.++|||||||++|+|++|..+|................. .. ...
T Consensus 168 y~aPE~~~~~~~~~~~~Dv~slG~il~e~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (298)
T cd07841 168 YRAPELLFGARHYGVGVDMWSVGCIFAELLLRVPFLPGDSDIDQLGKIFEALGTPTEENWPGVTSLPDYVEFKPFPPTPL 247 (298)
T ss_pred eeCHHHHhCCCCCCcHHHHHHHHHHHHHHHcCCccccCCccHHHHHHHHHHcCCCchhhhhhcccccccccccccCCcch
Confidence 999998865 4578899999999999999999766554211100000000000 00 000
Q ss_pred CCCCchhHHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 014478 207 GHFSNDEGTELVRLASRCLQSEARERPNAKSLVIS 241 (424)
Q Consensus 207 ~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~~~~~ 241 (424)
.......+.++.++|.+||..||++|||+.+++.+
T Consensus 248 ~~~~~~~~~~~~~li~~~l~~~P~~R~s~~e~l~~ 282 (298)
T cd07841 248 KQIFPAASDDALDLLQRLLTLNPNKRITARQALEH 282 (298)
T ss_pred hhhcccccHHHHHHHHHHhcCCcccCcCHHHHhhC
Confidence 00112346789999999999999999999999864
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is |
| >cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-36 Score=280.61 Aligned_cols=235 Identities=16% Similarity=0.245 Sum_probs=182.6
Q ss_pred CCCcccceeee--ecceecccccCCCc--hhhhHHHHHHHH-HhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHhHh
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESSD--LGETLNLEEAKA-VGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHL 76 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~~--~~~~~~~~E~~~-l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~l 76 (424)
|+||.||++.+ .+..+++|.+..+. .....+..|+.. ++.+.||||+++++++..+...+++|||++ |+|.+++
T Consensus 12 g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~iv~~~~~~~~~~~~~lv~e~~~-~~l~~~l 90 (283)
T cd06617 12 GAYGVVDKMRHVPTGTIMAVKRIRATVNSQEQKRLLMDLDISMRSVDCPYTVTFYGALFREGDVWICMEVMD-TSLDKFY 90 (283)
T ss_pred cCCeEEEEEEEcCCCcEEEEEEEecCCCcHHHHHHHHHHHHHHHHcCCCCeeeeeEEEecCCcEEEEhhhhc-ccHHHHH
Confidence 89999999988 46778888765433 233455666665 566689999999999999999999999997 5888877
Q ss_pred ccC--CCCCCCHHHHHHHHHHHHHHHHHHHhC-CCcccccCCCCCeeecCCCCeEEccccccccCCCC---CccccCccC
Q 014478 77 FHW--ETQPMKWAMRLRVALYLAQALEYCSSK-GRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG---KSYSTNLAF 150 (424)
Q Consensus 77 ~~~--~~~~l~~~~~~~i~~qi~~~L~~lH~~-~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~---~~~~gt~~y 150 (424)
... ....+++.+++.++.|++.||.|||++ + ++||||||+||+++.++.+||+|||++...... ....++..|
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~-i~h~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~y 169 (283)
T cd06617 91 KKVYDKGLTIPEDILGKIAVSIVKALEYLHSKLS-VIHRDVKPSNVLINRNGQVKLCDFGISGYLVDSVAKTIDAGCKPY 169 (283)
T ss_pred HHhccCCCCCCHHHHHHHHHHHHHHHHHHhhcCC-eecCCCCHHHEEECCCCCEEEeecccccccccccccccccCCccc
Confidence 532 235789999999999999999999997 7 999999999999999999999999998765432 224578899
Q ss_pred CCcccccc----CCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHHHHHHHHHhcc
Q 014478 151 TPPEYMRT----GRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQ 226 (424)
Q Consensus 151 ~aPE~~~~----~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~ 226 (424)
+|||.+.+ ..++.++|+|||||++|+|++|+.|+...... . ..................++.++.++|.+||.
T Consensus 170 ~aPE~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~-~--~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~ 246 (283)
T cd06617 170 MAPERINPELNQKGYDVKSDVWSLGITMIELATGRFPYDSWKTP-F--QQLKQVVEEPSPQLPAEKFSPEFQDFVNKCLK 246 (283)
T ss_pred cChhhcCCcccccccCccccchhhHHHHHHHHhCCCCCCccccC-H--HHHHHHHhcCCCCCCccccCHHHHHHHHHHcc
Confidence 99998864 34688999999999999999999887532110 0 11111121111111223467889999999999
Q ss_pred cCcCCCCCHHHHHHH
Q 014478 227 SEARERPNAKSLVIS 241 (424)
Q Consensus 227 ~dp~~Rps~~~~~~~ 241 (424)
.+|++||++.+++.+
T Consensus 247 ~~p~~Rp~~~~il~~ 261 (283)
T cd06617 247 KNYKERPNYPELLQH 261 (283)
T ss_pred CChhhCcCHHHHhcC
Confidence 999999999999875
|
Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs |
| >cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-36 Score=274.49 Aligned_cols=234 Identities=18% Similarity=0.221 Sum_probs=195.3
Q ss_pred CCCcccceeeee--cceecccccCCCc---hhhhHHHHHHHHHhcCCCcCcceeEEEEEeC--CeeeEEEecCCCCCHHh
Q 014478 2 GGRCSKFSICWF--HCHLKSSVLESSD---LGETLNLEEAKAVGNLRSERLANLIGCCYEA--DERLLVAEFMPNETLAK 74 (424)
Q Consensus 2 G~~g~v~~~~~~--~~~v~~~~~~~~~---~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~--~~~~lv~e~~~~gsL~~ 74 (424)
|++|.||.+... +..+++|++.... ...+.+.+|+.++++++||||+++++.+... ...+++|||+++++|.+
T Consensus 11 g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e~~~~~~L~~ 90 (260)
T cd06606 11 GSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIVRYYGSERDEEKNTLNIFLEYVSGGSLSS 90 (260)
T ss_pred cCceEEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHHHHcCCCCEeeEEEEEecCCCCeEEEEEEecCCCcHHH
Confidence 889999999985 6667777775544 3467889999999999999999999999988 78999999999999999
Q ss_pred HhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCCC------ccccCc
Q 014478 75 HLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGK------SYSTNL 148 (424)
Q Consensus 75 ~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~~------~~~gt~ 148 (424)
++.. ...+++.+++.++.|++.+|.|||+.+ ++|+||+|+||+++.++.++|+|||.+....... ...++.
T Consensus 91 ~~~~--~~~~~~~~~~~~~~~l~~~l~~lh~~~-~~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~ 167 (260)
T cd06606 91 LLKK--FGKLPEPVIRKYTRQILEGLAYLHSNG-IVHRDIKGANILVDSDGVVKLADFGCAKRLGDIETGEGTGSVRGTP 167 (260)
T ss_pred HHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-ccccCCCHHHEEEcCCCCEEEcccccEEecccccccccccCCCCCc
Confidence 9965 338999999999999999999999999 9999999999999999999999999988665432 345788
Q ss_pred cCCCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHHHHHHHHHhcccC
Q 014478 149 AFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSE 228 (424)
Q Consensus 149 ~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~d 228 (424)
.|+|||.+.+...+.++||||||+++++|++|..|+..... .................+...+..+.+++.+||..|
T Consensus 168 ~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~l~~~ 244 (260)
T cd06606 168 YWMAPEVIRGEEYGRAADIWSLGCTVIEMATGKPPWSELGN---PMAALYKIGSSGEPPEIPEHLSEEAKDFLRKCLRRD 244 (260)
T ss_pred cccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCc---hHHHHHhccccCCCcCCCcccCHHHHHHHHHhCcCC
Confidence 99999999988899999999999999999999988765420 011111111122333455667889999999999999
Q ss_pred cCCCCCHHHHHHH
Q 014478 229 ARERPNAKSLVIS 241 (424)
Q Consensus 229 p~~Rps~~~~~~~ 241 (424)
|++||++.+++.+
T Consensus 245 p~~Rp~~~~ll~~ 257 (260)
T cd06606 245 PKKRPTADELLQH 257 (260)
T ss_pred hhhCCCHHHHhhC
Confidence 9999999999864
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK |
| >cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.7e-37 Score=279.20 Aligned_cols=230 Identities=22% Similarity=0.243 Sum_probs=187.6
Q ss_pred CCCcccceeeee--cceecccccCCCc----hhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHhH
Q 014478 2 GGRCSKFSICWF--HCHLKSSVLESSD----LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKH 75 (424)
Q Consensus 2 G~~g~v~~~~~~--~~~v~~~~~~~~~----~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~ 75 (424)
|++|.||.+.+. +..+++|++.... .....+.+|++++++++||||+++++.+..+...+++|||+++++|.++
T Consensus 4 g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~ 83 (265)
T cd05579 4 GAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVVKLYYSFQGKKNLYLVMEYLPGGDLASL 83 (265)
T ss_pred CCceEEEEEEECCCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCCCcchhHHHHheecCcEEEEEEecCCCCcHHHH
Confidence 899999999984 6777778775443 2456788999999999999999999999999999999999999999999
Q ss_pred hccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCC------------Cc
Q 014478 76 LFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG------------KS 143 (424)
Q Consensus 76 l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~------------~~ 143 (424)
+.+ ...+++..+..++.|++.||.|||+.+ ++||||+|+||+++.++.++|+|||++...... ..
T Consensus 84 l~~--~~~~~~~~~~~i~~qi~~~L~~lH~~~-i~H~di~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~ 160 (265)
T cd05579 84 LEN--VGSLDEDVARIYIAEIVLALEYLHSNG-IIHRDLKPDNILIDSNGHLKLTDFGLSKVGLVRRQINLNDDEKEDKR 160 (265)
T ss_pred HHH--cCCCCHHHHHHHHHHHHHHHHHHHHcC-eecCCCCHHHeEEcCCCCEEEEecccchhcccCcccccccccccccC
Confidence 965 347899999999999999999999999 999999999999999999999999998754332 12
Q ss_pred cccCccCCCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhcccCCCCCch--hHHHHHHHH
Q 014478 144 YSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSND--EGTELVRLA 221 (424)
Q Consensus 144 ~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~l~~li 221 (424)
..++..|++||.+.....+.++||||||+++|++++|..|+........ ........ ...+.. .+..+.+++
T Consensus 161 ~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~----~~~~~~~~--~~~~~~~~~~~~~~~~i 234 (265)
T cd05579 161 IVGTPDYIAPEVILGQGHSKTVDWWSLGCILYEFLVGIPPFHGETPEEI----FQNILNGK--IEWPEDVEVSDEAIDLI 234 (265)
T ss_pred cccCccccCHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHH----HHHHhcCC--cCCCccccCCHHHHHHH
Confidence 3567889999999888889999999999999999999988765421111 11111111 122233 378999999
Q ss_pred HHhcccCcCCCCCHHHHHH
Q 014478 222 SRCLQSEARERPNAKSLVI 240 (424)
Q Consensus 222 ~~cl~~dp~~Rps~~~~~~ 240 (424)
.+||+.+|.+|||+..+.+
T Consensus 235 ~~~l~~~p~~Rpt~~~~~~ 253 (265)
T cd05579 235 SKLLVPDPEKRLGAKSIEE 253 (265)
T ss_pred HHHhcCCHhhcCCCccHHH
Confidence 9999999999999944443
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re |
| >cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-36 Score=279.90 Aligned_cols=231 Identities=18% Similarity=0.235 Sum_probs=188.2
Q ss_pred CCCcccceeee--ecceecccccCCC-chhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHhHhcc
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESS-DLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFH 78 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~ 78 (424)
|++|.||.+.. .+..+++|++... ......+.+|+.+++.++|+||+++++.+..++..++||||+++++|.+++.
T Consensus 31 g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~- 109 (292)
T cd06657 31 GSTGIVCIATVKSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVT- 109 (292)
T ss_pred CCCeEEEEEEEcCCCeEEEEEEecccchhHHHHHHHHHHHHHhcCCcchhheeeEEEeCCEEEEEEecCCCCcHHHHHh-
Confidence 78999999887 4566777766432 2345678899999999999999999999999999999999999999999874
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCC----CccccCccCCCcc
Q 014478 79 WETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG----KSYSTNLAFTPPE 154 (424)
Q Consensus 79 ~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~----~~~~gt~~y~aPE 154 (424)
...+++..+..++.|++.+|.|||+++ ++||||+|+||+++.++.++|+|||++...... ....++..|+|||
T Consensus 110 --~~~~~~~~~~~~~~ql~~~l~~lH~~g-ivH~dl~p~Nilv~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~~pE 186 (292)
T cd06657 110 --HTRMNEEQIAAVCLAVLKALSVLHAQG-VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKSLVGTPYWMAPE 186 (292)
T ss_pred --cCCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCCHHHEEECCCCCEEEcccccceecccccccccccccCccccCHH
Confidence 346899999999999999999999999 999999999999999999999999987654322 2346788999999
Q ss_pred ccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhcccCCC--CCchhHHHHHHHHHHhcccCcCCC
Q 014478 155 YMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGH--FSNDEGTELVRLASRCLQSEARER 232 (424)
Q Consensus 155 ~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~li~~cl~~dp~~R 232 (424)
.+.+..++.++|+||||+++|+|++|..|+........ ........... ....+++.+.+++.+||..||.+|
T Consensus 187 ~~~~~~~~~~~Dv~slGvil~el~tg~~p~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~R 261 (292)
T cd06657 187 LISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKA-----MKMIRDNLPPKLKNLHKVSPSLKGFLDRLLVRDPAQR 261 (292)
T ss_pred HhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH-----HHHHHhhCCcccCCcccCCHHHHHHHHHHHhCCcccC
Confidence 99888889999999999999999999988765321111 01111111111 223457789999999999999999
Q ss_pred CCHHHHHHH
Q 014478 233 PNAKSLVIS 241 (424)
Q Consensus 233 ps~~~~~~~ 241 (424)
|++.+++.+
T Consensus 262 ~~~~~ll~~ 270 (292)
T cd06657 262 ATAAELLKH 270 (292)
T ss_pred cCHHHHhcC
Confidence 999999864
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo |
| >cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-36 Score=280.91 Aligned_cols=237 Identities=19% Similarity=0.259 Sum_probs=186.6
Q ss_pred CCCcccceeee--ecceecccccCCC---chhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHhHh
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESS---DLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHL 76 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~---~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~l 76 (424)
|++|.||.+.+ .+..+++|++... ....+.+.+|++++++++|+||+++++++..++..++||||++++.+..+.
T Consensus 12 g~~~~v~~~~~~~~~~~v~vK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~~~~~~l~~~~ 91 (288)
T cd07833 12 GAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQLRHENIVNLKEAFRRKGRLYLVFEYVERTLLELLE 91 (288)
T ss_pred cCCeeEEEEEeCCCCcEEEEehhhhhcccccchhHHHHHHHHHHhcCCCCeeehhheEEECCEEEEEEecCCCCHHHHHH
Confidence 78999999987 4566777776543 233567899999999999999999999999999999999999987776665
Q ss_pred ccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCCC-----ccccCccCC
Q 014478 77 FHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGK-----SYSTNLAFT 151 (424)
Q Consensus 77 ~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~~-----~~~gt~~y~ 151 (424)
.. ...+++.++..++.||+.||.|||+++ ++||||+|+||+++.++.+||+|||++....... ...++..|+
T Consensus 92 ~~--~~~~~~~~~~~~~~~i~~~l~~LH~~~-i~H~dl~~~ni~~~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~~ 168 (288)
T cd07833 92 AS--PGGLPPDAVRSYIWQLLQAIAYCHSHN-IIHRDIKPENILVSESGVLKLCDFGFARALRARPASPLTDYVATRWYR 168 (288)
T ss_pred hc--CCCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCCHHHeEECCCCCEEEEeeecccccCCCccccccCcccccCCc
Confidence 43 456899999999999999999999999 9999999999999999999999999987655432 345678899
Q ss_pred CccccccC-CCCCCcceehhHHHHHHHhhCCCCCCchhhHHH--hhhhhh--------Hhh--hcc--------------
Q 014478 152 PPEYMRTG-RVTPESVVYSFGTMLLDLLSGKHIPPSHALDLI--RSKNFL--------LLM--DSA-------------- 204 (424)
Q Consensus 152 aPE~~~~~-~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~--~~~~~~--------~~~--~~~-------------- 204 (424)
|||++.+. .++.++||||||+++|+|++|..||........ ...... ... ...
T Consensus 169 ~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (288)
T cd07833 169 APELLVGDTNYGKPVDVWAIGCIMAELLDGEPLFPGDSDIDQLYLIQKCLGPLPPSHQELFSSNPRFAGVAFPEPSQPES 248 (288)
T ss_pred CCchhcCCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHhhhcccCccccccccCCCCCcHH
Confidence 99999887 788999999999999999999977764311100 000000 000 000
Q ss_pred cCCCCCchhHHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 014478 205 LEGHFSNDEGTELVRLASRCLQSEARERPNAKSLVIS 241 (424)
Q Consensus 205 ~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~~~~~ 241 (424)
.....+..++.++.++|.+||..+|++|||+++++.+
T Consensus 249 ~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 285 (288)
T cd07833 249 LERRYPGKVSSPALDFLKACLRMDPKERLTCDELLQH 285 (288)
T ss_pred HHHhcCCccchHHHHHHHHHhccCchhcccHHHHhcC
Confidence 0001223347889999999999999999999999753
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning |
| >cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.8e-37 Score=283.92 Aligned_cols=236 Identities=17% Similarity=0.255 Sum_probs=185.0
Q ss_pred CCCcccceeeee--cceecccccCCCc---hhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHhHh
Q 014478 2 GGRCSKFSICWF--HCHLKSSVLESSD---LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHL 76 (424)
Q Consensus 2 G~~g~v~~~~~~--~~~v~~~~~~~~~---~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~l 76 (424)
|++|.||.+.+. +..+++|++.... ...+.+.+|+++++.++||||+++++++..+...++||||+++++|..+.
T Consensus 12 g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~ 91 (286)
T cd07846 12 GSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQLRHENLVNLIEVFRRKKRLYLVFEFVDHTVLDDLE 91 (286)
T ss_pred CCCeEEEEEEECCCCCEEEEEeHhhccCcchhhHHHHHHHHHHHhcCCcchhhHHHhcccCCeEEEEEecCCccHHHHHH
Confidence 789999999883 5667777664332 23457889999999999999999999999999999999999999998877
Q ss_pred ccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCCC----ccccCccCCC
Q 014478 77 FHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGK----SYSTNLAFTP 152 (424)
Q Consensus 77 ~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~~----~~~gt~~y~a 152 (424)
.. ...+++.++..++.|++.||.|||+.+ ++||||+|+||+++.++.++|+|||++....... ...++..|+|
T Consensus 92 ~~--~~~~~~~~~~~~~~~i~~~l~~LH~~~-i~h~~l~p~ni~~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~a 168 (286)
T cd07846 92 KY--PNGLDESRVRKYLFQILRGIEFCHSHN-IIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYTDYVATRWYRA 168 (286)
T ss_pred hc--cCCCCHHHHHHHHHHHHHHHHHHHHCC-ccccCCCHHHEEECCCCcEEEEeeeeeeeccCCccccCcccceeeccC
Confidence 53 345899999999999999999999999 9999999999999999999999999987654332 2357889999
Q ss_pred ccccccC-CCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhh-----------Hhh------hcccCC-------
Q 014478 153 PEYMRTG-RVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFL-----------LLM------DSALEG------- 207 (424)
Q Consensus 153 PE~~~~~-~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~-----------~~~------~~~~~~------- 207 (424)
||++.+. .++.++||||||+++|+|++|..||+....... ..... ... ......
T Consensus 169 PE~~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (286)
T cd07846 169 PELLVGDTKYGRAVDIWAVGCLVTEMLTGEPLFPGDSDIDQ-LYHIIKCLGNLIPRHQEIFQKNPLFAGMRLPEVKEIEP 247 (286)
T ss_pred cHHhccccccCchHhHHHHHHHHHHHHcCCCCCCCCchHHH-HHHHHHHhCCCchhhHHHhccchHhhccccccccCcch
Confidence 9998754 478899999999999999999977764321000 00000 000 000000
Q ss_pred --CCCchhHHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 014478 208 --HFSNDEGTELVRLASRCLQSEARERPNAKSLVIS 241 (424)
Q Consensus 208 --~~~~~~~~~l~~li~~cl~~dp~~Rps~~~~~~~ 241 (424)
...+.++..+.+++.+||..+|++||++.+++.+
T Consensus 248 ~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~ 283 (286)
T cd07846 248 LEKRFPKLSGLVLDLAKQCLRIDPDDRPSSSQLLHH 283 (286)
T ss_pred HHHhCCCcCHHHHHHHHHHhcCCcccchhHHHHhcC
Confidence 0123457789999999999999999999999854
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI |
| >cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-36 Score=277.50 Aligned_cols=234 Identities=21% Similarity=0.219 Sum_probs=183.8
Q ss_pred CCCcccceeee--ecceecccccCCCc----hhhhHHHHHHH---HHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCH
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESSD----LGETLNLEEAK---AVGNLRSERLANLIGCCYEADERLLVAEFMPNETL 72 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~~----~~~~~~~~E~~---~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL 72 (424)
|++|.||.+.. .+..+++|.+.... .....+..|.. .++...||||+.+++++...+..++||||++||+|
T Consensus 5 g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~g~~L 84 (278)
T cd05606 5 GGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDL 84 (278)
T ss_pred CCCeEEEEEEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcEeeeeeeeecCCEEEEEEecCCCCcH
Confidence 88999998876 45678887765432 12223444544 34445799999999999999999999999999999
Q ss_pred HhHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCC--CccccCccC
Q 014478 73 AKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG--KSYSTNLAF 150 (424)
Q Consensus 73 ~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~--~~~~gt~~y 150 (424)
..++.. ...+++..+..++.|++.||.|||+.+ ++||||||+||+++.++.++|+|||++...... ....|+..|
T Consensus 85 ~~~l~~--~~~l~~~~~~~~~~ql~~~l~~lH~~~-i~H~di~p~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~y 161 (278)
T cd05606 85 HYHLSQ--HGVFSEAEMRFYAAEIILGLEHMHNRF-VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVGTHGY 161 (278)
T ss_pred HHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC-EEcCCCCHHHEEECCCCCEEEccCcCccccCccCCcCcCCCcCC
Confidence 998864 457999999999999999999999999 999999999999999999999999998754322 234689999
Q ss_pred CCccccccC-CCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHHHHHHHHHhcccCc
Q 014478 151 TPPEYMRTG-RVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEA 229 (424)
Q Consensus 151 ~aPE~~~~~-~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp 229 (424)
+|||++.++ .++.++||||+|+++|+|++|..||........ ...... ........+..++.++.+++.+||..+|
T Consensus 162 ~aPE~~~~~~~~~~~~Di~s~G~~l~~l~~g~~p~~~~~~~~~--~~~~~~-~~~~~~~~~~~~s~~~~~li~~~l~~~p 238 (278)
T cd05606 162 MAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDK--HEIDRM-TLTMAVELPDSFSPELRSLLEGLLQRDV 238 (278)
T ss_pred cCcHHhcCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCccch--HHHHHH-hhccCCCCCCcCCHHHHHHHHHHhhcCH
Confidence 999999755 588999999999999999999988765311111 111111 1112233455568899999999999999
Q ss_pred CCCC-----CHHHHHHH
Q 014478 230 RERP-----NAKSLVIS 241 (424)
Q Consensus 230 ~~Rp-----s~~~~~~~ 241 (424)
.+|| ++.+++++
T Consensus 239 ~~R~~~~~~~~~~ll~~ 255 (278)
T cd05606 239 NRRLGCLGRGAQEVKEH 255 (278)
T ss_pred HhccCCCCCCHHHHHhC
Confidence 9999 99999864
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co |
| >cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.8e-36 Score=271.60 Aligned_cols=231 Identities=19% Similarity=0.256 Sum_probs=192.0
Q ss_pred CCCcccceeee--ecceecccccCCCc---hhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHhHh
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESSD---LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHL 76 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~~---~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~l 76 (424)
|++|.+|.+.+ .+..+++|.+.... .....+.+|++++++++|||++++++++..++..+++|||+++++|.+++
T Consensus 11 g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~ 90 (254)
T cd06627 11 GAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPNIVKYIGSIETSDSLYIILEYAENGSLRQII 90 (254)
T ss_pred cCCeEEEEEEEcCCCcEEEEEEecccccCHHHHHHHHHHHHHHHhCCCCCccEEEEEEEeCCEEEEEEecCCCCcHHHHH
Confidence 78899999877 44567777765554 34568899999999999999999999999999999999999999999998
Q ss_pred ccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCCC----ccccCccCCC
Q 014478 77 FHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGK----SYSTNLAFTP 152 (424)
Q Consensus 77 ~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~~----~~~gt~~y~a 152 (424)
.. ...+++..+..++.|++.+|.+||+++ ++||||+|+||+++.++.++|+|||++....... ...++..|+|
T Consensus 91 ~~--~~~l~~~~~~~~~~~i~~~l~~lH~~~-i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~y~~ 167 (254)
T cd06627 91 KK--FGPFPESLVAVYVYQVLQGLAYLHEQG-VIHRDIKAANILTTKDGVVKLADFGVATKLNDVSKDDASVVGTPYWMA 167 (254)
T ss_pred Hh--ccCCCHHHHHHHHHHHHHHHHHHhhCC-cccCCCCHHHEEECCCCCEEEeccccceecCCCcccccccccchhhcC
Confidence 65 367899999999999999999999999 9999999999999999999999999988765443 2467889999
Q ss_pred ccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHHHHHHHHHhcccCcCCC
Q 014478 153 PEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARER 232 (424)
Q Consensus 153 PE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~R 232 (424)
||...+...+.++||||||+++|+|++|..|+..... ....... ........+..++..+.+++.+||..+|++|
T Consensus 168 pe~~~~~~~~~~~Dv~~lG~~l~~l~~g~~p~~~~~~----~~~~~~~-~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R 242 (254)
T cd06627 168 PEVIEMSGASTASDIWSLGCTVIELLTGNPPYYDLNP----MAALFRI-VQDDHPPLPEGISPELKDFLMQCFQKDPNLR 242 (254)
T ss_pred HhhhcCCCCCcchhHHHHHHHHHHHHhCCCCCCCccH----HHHHHHH-hccCCCCCCCCCCHHHHHHHHHHHhCChhhC
Confidence 9999877788999999999999999999977654311 1111111 1122334455678899999999999999999
Q ss_pred CCHHHHHH
Q 014478 233 PNAKSLVI 240 (424)
Q Consensus 233 ps~~~~~~ 240 (424)
||+.+++.
T Consensus 243 ~~~~~~l~ 250 (254)
T cd06627 243 PTAKQLLK 250 (254)
T ss_pred cCHHHHhc
Confidence 99999874
|
Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast |
| >cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.5e-36 Score=272.68 Aligned_cols=234 Identities=20% Similarity=0.218 Sum_probs=194.9
Q ss_pred CCCcccceeeee--cceecccccCCCc---hhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHhHh
Q 014478 2 GGRCSKFSICWF--HCHLKSSVLESSD---LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHL 76 (424)
Q Consensus 2 G~~g~v~~~~~~--~~~v~~~~~~~~~---~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~l 76 (424)
|++|.||.+.+. +..+++|++.... .....+.+|+++++.++|||++++++.+..+...++||||+++++|.+++
T Consensus 11 g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l 90 (258)
T cd08215 11 GSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNHPNIIKYYESFEEKGKLCIVMEYADGGDLSQKI 90 (258)
T ss_pred CCCeEEEEEEEcCCCcEEEEEEeecccCChHHHHHHHHHHHHHHhcCCCChhheEEEEecCCEEEEEEEecCCCcHHHHH
Confidence 889999999985 6777777775443 34667889999999999999999999999999999999999999999998
Q ss_pred ccCC--CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCCC----ccccCccC
Q 014478 77 FHWE--TQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGK----SYSTNLAF 150 (424)
Q Consensus 77 ~~~~--~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~~----~~~gt~~y 150 (424)
.... +..+++.++..++.+++.||.|||+.+ ++|+||+|+||+++.++.++|+|||++....... ...+++.|
T Consensus 91 ~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~-~~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~y 169 (258)
T cd08215 91 KKQKKEGKPFPEEQILDWFVQLCLALKYLHSRK-ILHRDIKPQNIFLTSNGLVKLGDFGISKVLSSTVDLAKTVVGTPYY 169 (258)
T ss_pred HHhhccCCCcCHHHHHHHHHHHHHHHHHHHhCC-EecccCChHHeEEcCCCcEEECCccceeecccCcceecceeeeecc
Confidence 6532 467999999999999999999999999 9999999999999999999999999987654432 34578899
Q ss_pred CCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHHHHHHHHHhcccCcC
Q 014478 151 TPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEAR 230 (424)
Q Consensus 151 ~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~ 230 (424)
+|||.+.+..++.++|+||+|+++++|++|..|+....... .............+..++.++.+++.+||..+|+
T Consensus 170 ~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~ 244 (258)
T cd08215 170 LSPELCQNKPYNYKSDIWSLGCVLYELCTLKHPFEGENLLE-----LALKILKGQYPPIPSQYSSELRNLVSSLLQKDPE 244 (258)
T ss_pred cChhHhccCCCCccccHHHHHHHHHHHHcCCCCCCCCcHHH-----HHHHHhcCCCCCCCCCCCHHHHHHHHHHcCCChh
Confidence 99999988889999999999999999999998875542111 1111112223344556788999999999999999
Q ss_pred CCCCHHHHHHH
Q 014478 231 ERPNAKSLVIS 241 (424)
Q Consensus 231 ~Rps~~~~~~~ 241 (424)
+|||+.+++.+
T Consensus 245 ~Rp~~~~ll~~ 255 (258)
T cd08215 245 ERPSIAQILQS 255 (258)
T ss_pred hCcCHHHHhcC
Confidence 99999999864
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They |
| >cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-36 Score=280.48 Aligned_cols=237 Identities=16% Similarity=0.165 Sum_probs=183.4
Q ss_pred CCCcccceeeee--cceecccccCCCch---hhhHHHHHHHHHhcCCCcCcceeEEEEEeC--CeeeEEEecCCCCCHHh
Q 014478 2 GGRCSKFSICWF--HCHLKSSVLESSDL---GETLNLEEAKAVGNLRSERLANLIGCCYEA--DERLLVAEFMPNETLAK 74 (424)
Q Consensus 2 G~~g~v~~~~~~--~~~v~~~~~~~~~~---~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~--~~~~lv~e~~~~gsL~~ 74 (424)
|++|.||.+.+. +..+++|.+..... ....+.+|+.++++++||||+++++++... ...++||||+++ +|.+
T Consensus 16 g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~lv~e~~~~-~L~~ 94 (293)
T cd07843 16 GTYGVVYRARDKKTGEIVALKKLKMEKEKEGFPITSLREINILLKLQHPNIVTVKEVVVGSNLDKIYMVMEYVEH-DLKS 94 (293)
T ss_pred CCCeEEEEEEECCCCcEEEEEEEeeccccccchhhHHHHHHHHHhcCCCCEEEEEEEEEecCCCcEEEEehhcCc-CHHH
Confidence 789999999984 55566666643322 234567899999999999999999999877 789999999975 9999
Q ss_pred HhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCC----CccccCccC
Q 014478 75 HLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG----KSYSTNLAF 150 (424)
Q Consensus 75 ~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~----~~~~gt~~y 150 (424)
++... ...+++.++..++.||+.||.|||+++ ++||||||+||+++.++.++|+|||++...... ....++..|
T Consensus 95 ~~~~~-~~~l~~~~~~~i~~qi~~aL~~LH~~~-i~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~ 172 (293)
T cd07843 95 LMETM-KQPFLQSEVKCLMLQLLSGVAHLHDNW-ILHRDLKTSNLLLNNRGILKICDFGLAREYGSPLKPYTQLVVTLWY 172 (293)
T ss_pred HHHhc-cCCCCHHHHHHHHHHHHHHHHHHHHCC-eeeccCCHHHEEECCCCcEEEeecCceeeccCCccccccccccccc
Confidence 88642 346899999999999999999999999 999999999999999999999999998865543 233567889
Q ss_pred CCccccccCC-CCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhh-------------------------Hhhhcc
Q 014478 151 TPPEYMRTGR-VTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFL-------------------------LLMDSA 204 (424)
Q Consensus 151 ~aPE~~~~~~-~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~-------------------------~~~~~~ 204 (424)
+|||.+.+.. .+.++|+||||+++|+|++|..||.............. ......
T Consensus 173 ~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (293)
T cd07843 173 RAPELLLGAKEYSTAIDMWSVGCIFAELLTKKPLFPGKSEIDQLNKIFKLLGTPTEKIWPGFSELPGAKKKTFTKYPYNQ 252 (293)
T ss_pred cCchhhcCCccccchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhccchhcccccccccchh
Confidence 9999987644 68899999999999999999987764321111000000 000000
Q ss_pred cCCCCCch-hHHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 014478 205 LEGHFSND-EGTELVRLASRCLQSEARERPNAKSLVIS 241 (424)
Q Consensus 205 ~~~~~~~~-~~~~l~~li~~cl~~dp~~Rps~~~~~~~ 241 (424)
....++.. +++.+.++|.+||+.||++|||+.+++.+
T Consensus 253 ~~~~~~~~~~~~~~~~li~~~l~~~p~~R~t~~ell~~ 290 (293)
T cd07843 253 LRKKFPALSLSDNGFDLLNRLLTYDPAKRISAEDALKH 290 (293)
T ss_pred hhccccccCCChHHHHHHHHHhccCccccCCHHHHhcC
Confidence 11112222 47789999999999999999999999854
|
Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the |
| >cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.3e-36 Score=272.65 Aligned_cols=232 Identities=17% Similarity=0.210 Sum_probs=187.4
Q ss_pred CCCcccceeee--ecceecccccCCC------chhhhHHHHHHHHHhcCCCcCcceeEEEEEeC--CeeeEEEecCCCCC
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESS------DLGETLNLEEAKAVGNLRSERLANLIGCCYEA--DERLLVAEFMPNET 71 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~------~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~--~~~~lv~e~~~~gs 71 (424)
|++|.||.+.. .+..+++|.+... ......+.+|++++++++|+||+++++++.+. ...+++|||+++++
T Consensus 13 g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~v~e~~~~~~ 92 (264)
T cd06653 13 GAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQYYGCLRDPEEKKLSIFVEYMPGGS 92 (264)
T ss_pred CCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCcceEEEEEEcCCCCEEEEEEEeCCCCc
Confidence 88999999986 4566676655321 22345788999999999999999999998764 45789999999999
Q ss_pred HHhHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCC-------Ccc
Q 014478 72 LAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG-------KSY 144 (424)
Q Consensus 72 L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~-------~~~ 144 (424)
|.+++.. ...+++..+.+++.|++.||.|||+.+ ++|+||||+||+++.++.++|+|||+++..... ...
T Consensus 93 L~~~~~~--~~~l~~~~~~~~~~~i~~al~~LH~~~-i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~ 169 (264)
T cd06653 93 IKDQLKA--YGALTENVTRRYTRQILQGVSYLHSNM-IVHRDIKGANILRDSAGNVKLGDFGASKRIQTICMSGTGIKSV 169 (264)
T ss_pred HHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHhCC-EecCCCCHHHEEEcCCCCEEECccccccccccccccCcccccc
Confidence 9999864 346889999999999999999999999 999999999999999999999999998764321 234
Q ss_pred ccCccCCCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHHHHHHHHHh
Q 014478 145 STNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRC 224 (424)
Q Consensus 145 ~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c 224 (424)
.++..|+|||++.+...+.++|+|||||++|+|++|+.||.... .................|...++.+.+++.+|
T Consensus 170 ~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~----~~~~~~~~~~~~~~~~~p~~~~~~~~~~i~~~ 245 (264)
T cd06653 170 TGTPYWMSPEVISGEGYGRKADVWSVACTVVEMLTEKPPWAEYE----AMAAIFKIATQPTKPMLPDGVSDACRDFLKQI 245 (264)
T ss_pred CCcccccCHhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCccC----HHHHHHHHHcCCCCCCCCcccCHHHHHHHHHH
Confidence 57889999999998888999999999999999999998876431 11112222222333455677888999999999
Q ss_pred cccCcCCCCCHHHHHHH
Q 014478 225 LQSEARERPNAKSLVIS 241 (424)
Q Consensus 225 l~~dp~~Rps~~~~~~~ 241 (424)
|. +|..||++.+++.+
T Consensus 246 l~-~~~~r~~~~~~~~~ 261 (264)
T cd06653 246 FV-EEKRRPTAEFLLRH 261 (264)
T ss_pred hc-CcccCccHHHHhcC
Confidence 99 57999999988754
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho |
| >cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-36 Score=272.49 Aligned_cols=218 Identities=20% Similarity=0.179 Sum_probs=177.3
Q ss_pred CCCCcccceeee--ecceecccccCCCchhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHhHhcc
Q 014478 1 MGGRCSKFSICW--FHCHLKSSVLESSDLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFH 78 (424)
Q Consensus 1 ~G~~g~v~~~~~--~~~~v~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~ 78 (424)
.|.+|.||.+.+ .+..+++|++.... .+.+|...+....||||+++++++...+..++||||++||+|.+++..
T Consensus 3 ~g~~~~v~~~~~~~~~~~~~~K~i~~~~----~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~ 78 (237)
T cd05576 3 LGVIDKVLLVMDTRTQQTFILKGLRKSS----EYSRERLTIIPHCVPNMVCLHKYIVSEDSVFLVLQHAEGGKLWSHISK 78 (237)
T ss_pred ccccceEEEEEEccCCcEEEEEeecchh----hhhhHHHHHHhcCCCceeehhhheecCCeEEEEEecCCCCCHHHHHHH
Confidence 489999999988 55667777765443 234556666666899999999999999999999999999999999864
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCC-CccccCccCCCccccc
Q 014478 79 WETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG-KSYSTNLAFTPPEYMR 157 (424)
Q Consensus 79 ~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~-~~~~gt~~y~aPE~~~ 157 (424)
..++++..+..++.|++.||.|||+++ ++||||||+||+++.++.++++|||.+...... ....++..|+|||.+.
T Consensus 79 --~~~l~~~~~~~~~~ql~~~l~~lH~~~-i~H~dlkp~Nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~y~aPE~~~ 155 (237)
T cd05576 79 --FLNIPEECVKRWAAEMVVALDALHREG-IVCRDLNPNNILLDDRGHIQLTYFSRWSEVEDSCDGEAVENMYCAPEVGG 155 (237)
T ss_pred --hcCCCHHHHHHHHHHHHHHHHHHHhCC-eeccCCCHHHEEEcCCCCEEEecccchhccccccccCCcCccccCCcccC
Confidence 346899999999999999999999999 999999999999999999999999987655433 2344567899999998
Q ss_pred cCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHHHHHHHHHhcccCcCCCCCH
Q 014478 158 TGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERPNA 235 (424)
Q Consensus 158 ~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~ 235 (424)
+..++.++|+||+|+++|||++|..|+...... .........+..+++.+.+++.+||+.||++||++
T Consensus 156 ~~~~~~~~DvwslG~il~el~~g~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~~~ 223 (237)
T cd05576 156 ISEETEACDWWSLGAILFELLTGKTLVECHPSG----------INTHTTLNIPEWVSEEARSLLQQLLQFNPTERLGA 223 (237)
T ss_pred CCCCCchhhHHHHHHHHHHHHHCcchhhcCchh----------cccccccCCcccCCHHHHHHHHHHccCCHHHhcCC
Confidence 888999999999999999999998664432110 00111123445567889999999999999999986
|
Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha |
| >KOG0586 consensus Serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.7e-37 Score=287.57 Aligned_cols=235 Identities=18% Similarity=0.229 Sum_probs=199.6
Q ss_pred CCCcccceeee--ecceecccccCCCchh---hhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHhHh
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESSDLG---ETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHL 76 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~~~~---~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~l 76 (424)
|.|+.|..+.. .+..|++|.+.++... ..-+.+|+++|..|+|||||+++.+......+|+||||+.+|.+.+++
T Consensus 67 g~f~~V~La~~~~t~~~VaiK~idkt~ln~~~~~k~~rev~imk~l~HPnIvkl~~v~~t~~~lylV~eya~~ge~~~yl 146 (596)
T KOG0586|consen 67 GNFAKVKLARHILTGTEVAIKIIDKTQLNPSKRQKLGREVDIMKSLNHPNIVKLFSVIETEATLYLVMEYASGGELFDYL 146 (596)
T ss_pred ceeEEEEeeEecCCCceEEEEEehhcccChHHHHHHHHHHHHHHhcCCcceeeeeeeeeecceeEEEEEeccCchhHHHH
Confidence 67888888876 7788999988766644 344788999999999999999999999999999999999999999999
Q ss_pred ccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCC---CccccCccCCCc
Q 014478 77 FHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG---KSYSTNLAFTPP 153 (424)
Q Consensus 77 ~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~---~~~~gt~~y~aP 153 (424)
.+ .+.+.+..+..++.|+.++++|||+++ |||||||.+||||+.+.++||+|||++...... .+.+|++.|.||
T Consensus 147 ~~--~gr~~e~~ar~~F~q~vsaveYcH~k~-ivHrdLk~eNilL~~~mnikIaDfgfS~~~~~~~~lqt~cgsppyAaP 223 (596)
T KOG0586|consen 147 VK--HGRMKEKEARAKFRQIVSAVEYCHSKN-IVHRDLKAENILLDENMNIKIADFGFSTFFDYGLMLQTFCGSPPYAAP 223 (596)
T ss_pred Hh--cccchhhhhhhhhHHHHHHHHHHhhcc-eeccccchhhcccccccceeeeccccceeecccccccccCCCCCccCh
Confidence 76 456777999999999999999999999 999999999999999999999999999887644 567899999999
Q ss_pred cccccCCC-CCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHHHHHHHHHhcccCcCCC
Q 014478 154 EYMRTGRV-TPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARER 232 (424)
Q Consensus 154 E~~~~~~~-~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~R 232 (424)
|.+.+.++ ++.+|+||+|+++|-|++|..||.+......+...+. . ...+|--++.++.++|+++|..+|.+|
T Consensus 224 El~~g~~y~gpe~D~Wslgvvly~LV~GsLPFDG~~lk~Lr~rvl~----g--k~rIp~~ms~dce~lLrk~lvl~Pskr 297 (596)
T KOG0586|consen 224 ELFNGKKYDGPEVDIWSLGVVLYALVEGSLPFDGQNLKELRPRVLR----G--KYRIPFYMSCDCEDLLRKFLVLNPSKR 297 (596)
T ss_pred HhhcCcccCCcceehhhhhhhheeeeecccccCCcccccccchhee----e--eecccceeechhHHHHHHhhccCcccc
Confidence 99998876 6799999999999999999999887533322222211 1 123455567889999999999999999
Q ss_pred CCHHHHHHHHHHH
Q 014478 233 PNAKSLVISLMSL 245 (424)
Q Consensus 233 ps~~~~~~~l~~~ 245 (424)
++++++..+-+..
T Consensus 298 ~~~dqim~~~W~n 310 (596)
T KOG0586|consen 298 GPCDQIMKDRWRN 310 (596)
T ss_pred CCHHHhhhhcccc
Confidence 9999999876543
|
|
| >cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-35 Score=276.16 Aligned_cols=237 Identities=16% Similarity=0.163 Sum_probs=180.6
Q ss_pred CCCcccceeee--ecceecccccCCCc--hhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHhHhc
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESSD--LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLF 77 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~~--~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~ 77 (424)
|++|.||.+.. .+..+++|++.... .....+.+|+.+++.++|+||+++++++..+...++||||+. ++|.+++.
T Consensus 16 g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~ 94 (291)
T cd07870 16 GSYATVYKGISRINGQLVALKVISMKTEEGVPFTAIREASLLKGLKHANIVLLHDIIHTKETLTFVFEYMH-TDLAQYMI 94 (291)
T ss_pred cCCEEEEEEEEcCCCcEEEEEEecccCcCCCcHHHHHHHHHHHhcCCCCEeEEEEEEecCCeEEEEEeccc-CCHHHHHH
Confidence 78999999876 46677777765433 223467889999999999999999999999999999999996 57777765
Q ss_pred cCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCC----CccccCccCCCc
Q 014478 78 HWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG----KSYSTNLAFTPP 153 (424)
Q Consensus 78 ~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~----~~~~gt~~y~aP 153 (424)
. ....+++.++..++.|++.||.|||+.+ ++|+||||+||+++.++.++|+|||+++..... ....++..|+||
T Consensus 95 ~-~~~~~~~~~~~~~~~qi~~~L~~lH~~~-i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~y~aP 172 (291)
T cd07870 95 Q-HPGGLHPYNVRLFMFQLLRGLAYIHGQH-ILHRDLKPQNLLISYLGELKLADFGLARAKSIPSQTYSSEVVTLWYRPP 172 (291)
T ss_pred h-CCCCCCHHHHHHHHHHHHHHHHHHHhCC-cccCCCChHHEEEcCCCcEEEeccccccccCCCCCCCCCccccccccCC
Confidence 4 2356788899999999999999999999 999999999999999999999999998754322 233568899999
Q ss_pred cccccC-CCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhh------------------HhhhcccCCCCC----
Q 014478 154 EYMRTG-RVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFL------------------LLMDSALEGHFS---- 210 (424)
Q Consensus 154 E~~~~~-~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~------------------~~~~~~~~~~~~---- 210 (424)
|.+.+. .++.++||||||+++|+|++|..||.............. ...........+
T Consensus 173 E~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (291)
T cd07870 173 DVLLGATDYSSALDIWGAGCIFIEMLQGQPAFPGVSDVFEQLEKIWTVLGVPTEDTWPGVSKLPNYKPEWFLPCKPQQLR 252 (291)
T ss_pred ceeecCCCCCcHHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHHHHHHcCCCChhhhhhhhhcccccchhccccCCcchh
Confidence 998754 478899999999999999999988764321100000000 000000000000
Q ss_pred -----chhHHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 014478 211 -----NDEGTELVRLASRCLQSEARERPNAKSLVIS 241 (424)
Q Consensus 211 -----~~~~~~l~~li~~cl~~dp~~Rps~~~~~~~ 241 (424)
...+.++.+++.+||..||.+|||+.+++.+
T Consensus 253 ~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~~~l~h 288 (291)
T cd07870 253 VVWKRLSRPPKAEDLASQMLMMFPKDRISAQDALLH 288 (291)
T ss_pred hhccccCCChHHHHHHHHHhCcCcccCcCHHHHhcC
Confidence 0125678999999999999999999998754
|
Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess |
| >cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-36 Score=277.66 Aligned_cols=238 Identities=16% Similarity=0.173 Sum_probs=185.0
Q ss_pred CCCcccceeee--ecceecccccCCCc---hhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHhHh
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESSD---LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHL 76 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~~---~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~l 76 (424)
|++|.||++.+ .+..+++|++.... .....+.+|+++++.++||||+++++++..++..+++|||++ ++|.+++
T Consensus 10 g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~~~~iv~~~~~~~~~~~~~iv~e~~~-~~l~~~~ 88 (283)
T cd07835 10 GTYGVVYKARDKLTGEIVALKKIRLETEDEGVPSTAIREISLLKELNHPNIVRLLDVVHSENKLYLVFEFLD-LDLKKYM 88 (283)
T ss_pred CCCeEEEEEEEcCCCCEEEEEEeecccccccchhHHHHHHHHHHhcCCCCccCHhheeccCCeEEEEEeccC-cCHHHHH
Confidence 78899999987 46667777665432 223578899999999999999999999999999999999995 5999998
Q ss_pred ccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCC----CccccCccCCC
Q 014478 77 FHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG----KSYSTNLAFTP 152 (424)
Q Consensus 77 ~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~----~~~~gt~~y~a 152 (424)
.......+++..+..++.|++.||.|||+++ ++||||+|+||+++.++.++|+|||+++..... ....++..|+|
T Consensus 89 ~~~~~~~~~~~~~~~~~~~i~~~L~~lH~~~-~~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~a 167 (283)
T cd07835 89 DSSPLTGLDPPLIKSYLYQLLQGIAYCHSHR-VLHRDLKPQNLLIDREGALKLADFGLARAFGVPVRTYTHEVVTLWYRA 167 (283)
T ss_pred hhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC-eeCCCCCHHHEEEcCCCcEEEeecccccccCCCccccCccccccCCCC
Confidence 6533346899999999999999999999999 999999999999999999999999998754322 22345788999
Q ss_pred ccccccC-CCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhh-----------------Hhh---hc---ccCCC
Q 014478 153 PEYMRTG-RVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFL-----------------LLM---DS---ALEGH 208 (424)
Q Consensus 153 PE~~~~~-~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~-----------------~~~---~~---~~~~~ 208 (424)
||++.+. .++.++|+||||+++|+|++|+.||.............. ... .. .....
T Consensus 168 PE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (283)
T cd07835 168 PEILLGSRQYSTPVDIWSIGCIFAEMVNRRPLFPGDSEIDQLFRIFRTLGTPDEDVWPGVTSLPDYKPTFPKWARQDLSK 247 (283)
T ss_pred CceeecCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhhhhhchhhhhhcccccccchhh
Confidence 9988764 468899999999999999999988764321100000000 000 00 00011
Q ss_pred CCchhHHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 014478 209 FSNDEGTELVRLASRCLQSEARERPNAKSLVIS 241 (424)
Q Consensus 209 ~~~~~~~~l~~li~~cl~~dp~~Rps~~~~~~~ 241 (424)
.....+..+.++|.+||+.||++|||+++++.+
T Consensus 248 ~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~~ 280 (283)
T cd07835 248 VVPNLDEDGLDLLSKMLVYDPAKRISAKAALQH 280 (283)
T ss_pred hcCCCCHHHHHHHHHHhcCChhhCcCHHHHhcC
Confidence 123456789999999999999999999999854
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc |
| >cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.3e-36 Score=272.73 Aligned_cols=234 Identities=14% Similarity=0.178 Sum_probs=191.7
Q ss_pred CCCcccceeee--ecceecccccCCC---chhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHhHh
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESS---DLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHL 76 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~---~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~l 76 (424)
|++|.||.+.+ .+..+++|++... ......+.+|+++++.++|+||+++++++..+...++||||+++++|.+++
T Consensus 11 g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~ 90 (256)
T cd08530 11 GSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASVNHPNIISYKEAFLDGNKLCIVMEYAPFGDLSKAI 90 (256)
T ss_pred CCceeEEEEEECCCCCEEEEEEEehhhccHHHHHHHHHHHHHHHhCCCCCchhhhhhhccCCEEEEEehhcCCCCHHHHH
Confidence 78899999877 3455666665432 233567788999999999999999999999999999999999999999998
Q ss_pred ccC--CCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCC--CccccCccCCC
Q 014478 77 FHW--ETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG--KSYSTNLAFTP 152 (424)
Q Consensus 77 ~~~--~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~--~~~~gt~~y~a 152 (424)
.+. .+..+++..++.++.|++.||.|||+.+ ++|+||+|+||+++.++.+||+|||+++..... ....++..|++
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~l~~al~~lh~~~-i~h~~l~~~ni~~~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~ 169 (256)
T cd08530 91 SKRKKKRKLIPEQEIWRIFIQLLRGLQALHEQK-ILHRDLKSANILLVANDLVKIGDLGISKVLKKNMAKTQIGTPHYMA 169 (256)
T ss_pred HHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhCC-cccCCCCcceEEEecCCcEEEeeccchhhhccCCcccccCCccccC
Confidence 542 2356899999999999999999999999 999999999999999999999999998766543 23457889999
Q ss_pred ccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHHHHHHHHHhcccCcCCC
Q 014478 153 PEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARER 232 (424)
Q Consensus 153 PE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~R 232 (424)
||.+.+..++.++|+||||+++|+|++|+.|+....... .............+...+.++.+++.+||..+|++|
T Consensus 170 Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R 244 (256)
T cd08530 170 PEVWKGRPYSYKSDIWSLGCLLYEMATFAPPFEARSMQD-----LRYKVQRGKYPPIPPIYSQDLQNFIRSMLQVKPKLR 244 (256)
T ss_pred HHHHCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH-----HHHHHhcCCCCCCchhhCHHHHHHHHHHcCCCcccC
Confidence 999998889999999999999999999998876532211 111122222233445678899999999999999999
Q ss_pred CCHHHHHHH
Q 014478 233 PNAKSLVIS 241 (424)
Q Consensus 233 ps~~~~~~~ 241 (424)
||+.+++.+
T Consensus 245 p~~~~~l~~ 253 (256)
T cd08530 245 PNCDKILAS 253 (256)
T ss_pred CCHHHHhcC
Confidence 999999854
|
Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an |
| >cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=7e-36 Score=277.99 Aligned_cols=237 Identities=16% Similarity=0.149 Sum_probs=181.2
Q ss_pred CCCcccceeee--ecceecccccCCCch---hhhHHHHHHHHHhcC-CCcCcceeEEEEEeCCe-----eeEEEecCCCC
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESSDL---GETLNLEEAKAVGNL-RSERLANLIGCCYEADE-----RLLVAEFMPNE 70 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~~~---~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~-----~~lv~e~~~~g 70 (424)
|++|.||.+.+ .+..+++|+...... ....+.+|+.+++.+ +||||+++++++...+. .++||||+++
T Consensus 12 g~~g~vy~~~~~~~~~~v~lK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~~~~lv~e~~~~- 90 (295)
T cd07837 12 GTYGKVYKARDKNTGKLVALKKTRLEMDEEGIPPTALREISLLQMLSESIYIVRLLDVEHVEEKNGKPSLYLVFEYLDS- 90 (295)
T ss_pred cCCeEEEEEEECCCCcEEEEEeehhhccccCCchHHHHHHHHHHHccCCCCccceeeeEeecCCCCCceEEEEeeccCc-
Confidence 88999999987 456677776544322 235788899999999 46999999999987665 7999999986
Q ss_pred CHHhHhccCC---CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecC-CCCeEEccccccccCCCC----C
Q 014478 71 TLAKHLFHWE---TQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDK-DGNPRLSSFGLMKNSRDG----K 142 (424)
Q Consensus 71 sL~~~l~~~~---~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~-~~~~kl~Dfg~~~~~~~~----~ 142 (424)
+|.+++.... ...+++..++.++.||+.||.|||+++ ++||||||+||+++. ++.+||+|||+++..... .
T Consensus 91 ~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~-i~H~dl~~~nil~~~~~~~~kl~dfg~~~~~~~~~~~~~ 169 (295)
T cd07837 91 DLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCHKHG-VMHRDLKPQNLLVDKQKGLLKIADLGLGRAFSIPVKSYT 169 (295)
T ss_pred CHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHHCC-eeecCCChHHEEEecCCCeEEEeecccceecCCCccccC
Confidence 8988875422 346899999999999999999999999 999999999999998 889999999998754322 2
Q ss_pred ccccCccCCCccccccC-CCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhh-c-----------------
Q 014478 143 SYSTNLAFTPPEYMRTG-RVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMD-S----------------- 203 (424)
Q Consensus 143 ~~~gt~~y~aPE~~~~~-~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~-~----------------- 203 (424)
...+++.|+|||.+.+. .++.++||||||+++|+|++|..||......... ........ +
T Consensus 170 ~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (295)
T cd07837 170 HEIVTLWYRAPEVLLGSTHYSTPVDIWSVGCIFAEMSRKQPLFPGDSELQQL-LHIFKLLGTPTEQVWPGVSKLRDWHEF 248 (295)
T ss_pred CcccccCCCChHHhhCCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHHHH-HHHHHHhCCCChhhCcchhhccchhhc
Confidence 23567889999988754 5789999999999999999999887653211100 00000000 0
Q ss_pred -----ccCCCCCchhHHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 014478 204 -----ALEGHFSNDEGTELVRLASRCLQSEARERPNAKSLVIS 241 (424)
Q Consensus 204 -----~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~~~~~ 241 (424)
.......+.+++++.++|.+||..||++|||+++++.+
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~R~~~~eil~~ 291 (295)
T cd07837 249 PQWKPQDLSRAVPDLSPEGLDLLQKMLRYDPAKRISAKAALTH 291 (295)
T ss_pred CcccchhHHHhccccCHHHHHHHHHHccCChhhcCCHHHHhcC
Confidence 00000112357789999999999999999999999854
|
Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm |
| >PLN00009 cyclin-dependent kinase A; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-35 Score=276.64 Aligned_cols=238 Identities=16% Similarity=0.174 Sum_probs=182.1
Q ss_pred CCCcccceeee--ecceecccccCCCc---hhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHhHh
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESSD---LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHL 76 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~~---~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~l 76 (424)
|++|.||++.+ .+..+++|.+.... ...+.+.+|++++++++||||+++++++..+...++||||++ ++|.+++
T Consensus 13 g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~-~~l~~~~ 91 (294)
T PLN00009 13 GTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKRLYLVFEYLD-LDLKKHM 91 (294)
T ss_pred CCCEEEEEEEecCCCcEEEEEehhhccccccchHHHHHHHHHHHhccCCCEeeEEEEEecCCeEEEEEeccc-ccHHHHH
Confidence 78899999987 35567777664332 224578899999999999999999999999999999999996 4888887
Q ss_pred ccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecC-CCCeEEccccccccCCCC----CccccCccCC
Q 014478 77 FHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDK-DGNPRLSSFGLMKNSRDG----KSYSTNLAFT 151 (424)
Q Consensus 77 ~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~-~~~~kl~Dfg~~~~~~~~----~~~~gt~~y~ 151 (424)
.......+++..+..++.||+.||.|||+++ ++||||+|+||+++. ++.+||+|||++...... ....++..|+
T Consensus 92 ~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~-i~H~dl~p~nill~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~ 170 (294)
T PLN00009 92 DSSPDFAKNPRLIKTYLYQILRGIAYCHSHR-VLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYR 170 (294)
T ss_pred HhCCCCCcCHHHHHHHHHHHHHHHHHHHhCC-eeCCCCCcceEEEECCCCEEEEcccccccccCCCccccccCceeeccc
Confidence 6544445788899999999999999999999 999999999999985 457999999998764322 2335678999
Q ss_pred CccccccC-CCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhH-------hhh---------ccc---CC----
Q 014478 152 PPEYMRTG-RVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLL-------LMD---------SAL---EG---- 207 (424)
Q Consensus 152 aPE~~~~~-~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~-------~~~---------~~~---~~---- 207 (424)
|||++.+. .++.++|||||||++|+|++|..||............+.. .+. ... ..
T Consensus 171 ~PE~~~~~~~~~~~~Dv~slG~i~~~l~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (294)
T PLN00009 171 APEILLGSRHYSTPVDIWSVGCIFAEMVNQKPLFPGDSEIDELFKIFRILGTPNEETWPGVTSLPDYKSAFPKWPPKDLA 250 (294)
T ss_pred CHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhccccccchhhhhhcccCCCCCHH
Confidence 99998764 5788999999999999999999887643211100000000 000 000 00
Q ss_pred CCCchhHHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 014478 208 HFSNDEGTELVRLASRCLQSEARERPNAKSLVIS 241 (424)
Q Consensus 208 ~~~~~~~~~l~~li~~cl~~dp~~Rps~~~~~~~ 241 (424)
......++++.+++.+||+.||++||++.+++.+
T Consensus 251 ~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~~l~~ 284 (294)
T PLN00009 251 TVVPTLEPAGVDLLSKMLRLDPSKRITARAALEH 284 (294)
T ss_pred HhCcCCChHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 0112456789999999999999999999999864
|
|
| >cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-35 Score=274.90 Aligned_cols=236 Identities=18% Similarity=0.199 Sum_probs=180.6
Q ss_pred CCCcccceeee--ecceecccccCCCc--hhhhHHHHHHHHHhcCC-CcCcceeEEEEEeC--CeeeEEEecCCCCCHHh
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESSD--LGETLNLEEAKAVGNLR-SERLANLIGCCYEA--DERLLVAEFMPNETLAK 74 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~~--~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~--~~~~lv~e~~~~gsL~~ 74 (424)
|++|.||.+.. .+..+++|++.... .......+|+.++.++. |+||+++++++.++ +..++||||+++ +|.+
T Consensus 10 g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~lv~e~~~~-~l~~ 88 (282)
T cd07831 10 GTFSEVLKAQSRKTGKYYAIKCMKKHFKSLEQVNNLREIQALRRLSPHPNILRLIEVLFDRKTGRLALVFELMDM-NLYE 88 (282)
T ss_pred cccceEEEEEEcCCCcEEEEEEehhccCCchhhhHHHHHHHHhhcCCCCCccceEEEEecCCCCcEEEEEecCCc-cHHH
Confidence 78999999987 45667777665432 22334567999999995 99999999999987 789999999975 8888
Q ss_pred HhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCC---CccccCccCC
Q 014478 75 HLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG---KSYSTNLAFT 151 (424)
Q Consensus 75 ~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~---~~~~gt~~y~ 151 (424)
.+.. ....+++.++..++.|++.||.|||+++ ++||||||+||+++. +.+||+|||+++..... ....++..|+
T Consensus 89 ~l~~-~~~~~~~~~~~~~~~qi~~~L~~LH~~~-i~H~dl~p~ni~l~~-~~~kl~dfg~~~~~~~~~~~~~~~~~~~y~ 165 (282)
T cd07831 89 LIKG-RKRPLPEKRVKSYMYQLLKSLDHMHRNG-IFHRDIKPENILIKD-DILKLADFGSCRGIYSKPPYTEYISTRWYR 165 (282)
T ss_pred HHHh-ccCCCCHHHHHHHHHHHHHHHHHHHHCC-ceecccCHHHEEEcC-CCeEEEecccccccccCCCcCCCCCCcccC
Confidence 8754 2357899999999999999999999999 999999999999999 99999999998865433 2345788999
Q ss_pred Ccccccc-CCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhh----------hhHhhhc--ccCCC----------
Q 014478 152 PPEYMRT-GRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKN----------FLLLMDS--ALEGH---------- 208 (424)
Q Consensus 152 aPE~~~~-~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~----------~~~~~~~--~~~~~---------- 208 (424)
|||++.. +.++.++|||||||++|||++|..||+........... ....... .....
T Consensus 166 aPE~~~~~~~~~~~~Di~slGv~l~el~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (282)
T cd07831 166 APECLLTDGYYGPKMDIWAVGCVFFEILSLFPLFPGTNELDQIAKIHDVLGTPDAEVLKKFRKSRHMNYNFPSKKGTGLR 245 (282)
T ss_pred ChhHhhcCCCCCcchhHHHHHHHHHHHHcCCcCCCCCCHHHHHHHHHHHcCCCCHHHHHhhcccccccccCcccccccHH
Confidence 9998754 45788999999999999999999888653211100000 0000000 00000
Q ss_pred -CCchhHHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 014478 209 -FSNDEGTELVRLASRCLQSEARERPNAKSLVIS 241 (424)
Q Consensus 209 -~~~~~~~~l~~li~~cl~~dp~~Rps~~~~~~~ 241 (424)
.....+.++.++|.+||+.||++||++++++.+
T Consensus 246 ~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~~ 279 (282)
T cd07831 246 KLLPNASAEGLDLLKKLLAYDPDERITAKQALRH 279 (282)
T ss_pred HHcccccHHHHHHHHHHhccCcccccCHHHHhhC
Confidence 112457899999999999999999999999864
|
Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation. |
| >PHA02882 putative serine/threonine kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-35 Score=275.11 Aligned_cols=237 Identities=12% Similarity=0.078 Sum_probs=171.7
Q ss_pred CCCcccceeeeecc-----eecccccCCCchh--h----------hHHHHHHHHHhcCCCcCcceeEEEEEeCC----ee
Q 014478 2 GGRCSKFSICWFHC-----HLKSSVLESSDLG--E----------TLNLEEAKAVGNLRSERLANLIGCCYEAD----ER 60 (424)
Q Consensus 2 G~~g~v~~~~~~~~-----~v~~~~~~~~~~~--~----------~~~~~E~~~l~~l~h~~iv~~~~~~~~~~----~~ 60 (424)
||||.||++.+.+. .+++++....... . .....+...+..+.|+||+++++.+.... ..
T Consensus 23 G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~ 102 (294)
T PHA02882 23 GGFGCVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNIDHLGIPKYYGCGSFKRCRMYYR 102 (294)
T ss_pred CCCceEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccCCCCCCCcEEEeeeEecCCceEE
Confidence 99999999988543 2333322111110 0 11223445566779999999999876543 34
Q ss_pred eEEEecCCCCCHHhHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCC
Q 014478 61 LLVAEFMPNETLAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRD 140 (424)
Q Consensus 61 ~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~ 140 (424)
++++|++.. ++.+.+.. ....++..+..++.|++.||.|||+++ ++||||||+|||++.++.++|+|||+++....
T Consensus 103 ~~~~~~~~~-~~~~~~~~--~~~~~~~~~~~i~~qi~~~l~~lH~~~-iiHrDiKp~Nill~~~~~~~l~DFGla~~~~~ 178 (294)
T PHA02882 103 FILLEKLVE-NTKEIFKR--IKCKNKKLIKNIMKDMLTTLEYIHEHG-ISHGDIKPENIMVDGNNRGYIIDYGIASHFII 178 (294)
T ss_pred EEEEehhcc-CHHHHHHh--hccCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCCHHHEEEcCCCcEEEEEcCCceeecc
Confidence 688888744 77776643 234678889999999999999999999 99999999999999999999999999875421
Q ss_pred -----------CCccccCccCCCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhh-HHHhhhhhhHhhhcccCC-
Q 014478 141 -----------GKSYSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHAL-DLIRSKNFLLLMDSALEG- 207 (424)
Q Consensus 141 -----------~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~- 207 (424)
.....||+.|+|||+..+..++.++|||||||++|||++|+.||..... ..................
T Consensus 179 ~~~~~~~~~~~~~~~~gt~~y~ape~~~~~~~~~~~DiwSlG~~l~el~~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (294)
T PHA02882 179 HGKHIEYSKEQKDLHRGTLYYAGLDAHNGACVTRRGDLESLGYCMLKWAGIKLPWKGFGHNGNLIHAAKCDFIKRLHEGK 258 (294)
T ss_pred CCcccccccccccccCCCccccCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCccccchHHHHHhHHHHHHHhhhhh
Confidence 1224689999999999988899999999999999999999988865411 111110111111111111
Q ss_pred CCCchhHHHHHHHHHHhcccCcCCCCCHHHHHHHH
Q 014478 208 HFSNDEGTELVRLASRCLQSEARERPNAKSLVISL 242 (424)
Q Consensus 208 ~~~~~~~~~l~~li~~cl~~dp~~Rps~~~~~~~l 242 (424)
.....++.++.+++..||..+|++||++.++++.+
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~rp~~~~l~~~~ 293 (294)
T PHA02882 259 IKIKNANKFIYDFIECVTKLSYEEKPDYDALIKIF 293 (294)
T ss_pred hccCCCCHHHHHHHHHHHhCCCCCCCCHHHHHHhh
Confidence 12334578899999999999999999999998765
|
|
| >cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-35 Score=282.51 Aligned_cols=234 Identities=12% Similarity=0.137 Sum_probs=182.6
Q ss_pred CCCcccceeee--ecceecccccCCC---chhhhHHHHHHHHHhcCCCcCcceeEEEEEeC------CeeeEEEecCCCC
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESS---DLGETLNLEEAKAVGNLRSERLANLIGCCYEA------DERLLVAEFMPNE 70 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~---~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~------~~~~lv~e~~~~g 70 (424)
|++|.||.+.. .+..+++|++... ......+.+|+.++++++||||+++++++... ...++||||+.+
T Consensus 27 g~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~lv~e~~~~- 105 (353)
T cd07850 27 GAQGIVCAAYDTVTGQNVAIKKLSRPFQNVTHAKRAYRELVLMKLVNHKNIIGLLNVFTPQKSLEEFQDVYLVMELMDA- 105 (353)
T ss_pred CCCEEEEEEEECCCCCEEEEEecCccccChhHHHHHHHHHHHHHhcCCCCCcceeeeeccCCCccccCcEEEEEeccCC-
Confidence 88999999986 5677888877532 23345677899999999999999999998644 246899999965
Q ss_pred CHHhHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCCC---ccccC
Q 014478 71 TLAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGK---SYSTN 147 (424)
Q Consensus 71 sL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~~---~~~gt 147 (424)
+|.+.+.. .++...+..++.|++.||.|||+++ ++||||||+||+++.++.+||+|||+++...... ...++
T Consensus 106 ~l~~~~~~----~l~~~~~~~~~~ql~~aL~~LH~~g-i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~ 180 (353)
T cd07850 106 NLCQVIQM----DLDHERMSYLLYQMLCGIKHLHSAG-IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVT 180 (353)
T ss_pred CHHHHHhh----cCCHHHHHHHHHHHHHHHHHHHhCC-eeeCCCCHHHEEECCCCCEEEccCccceeCCCCCCCCCCccc
Confidence 89888843 3899999999999999999999999 9999999999999999999999999998655432 34578
Q ss_pred ccCCCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHH-Hhhh-----------------hhhHhhhccc----
Q 014478 148 LAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDL-IRSK-----------------NFLLLMDSAL---- 205 (424)
Q Consensus 148 ~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~-~~~~-----------------~~~~~~~~~~---- 205 (424)
..|+|||++.+..++.++|||||||++|+|++|+.||+...... +... ..........
T Consensus 181 ~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (353)
T cd07850 181 RYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGTVLFPGTDHIDQWNKIIEQLGTPSDEFMSRLQPTVRNYVENRPKYAG 260 (353)
T ss_pred ccccCHHHHhCCCCCCchhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhhhhhhHHhhcCCCCCC
Confidence 89999999998889999999999999999999998886532100 0000 0000000000
Q ss_pred ---------------CCCCCchhHHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 014478 206 ---------------EGHFSNDEGTELVRLASRCLQSEARERPNAKSLVIS 241 (424)
Q Consensus 206 ---------------~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~~~~~ 241 (424)
....+...+.++.++|.+||+.||++|||+.+++.+
T Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eiL~~ 311 (353)
T cd07850 261 YSFEELFPDVLFPPDSESHNKLKASQARDLLSKMLVIDPEKRISVDDALQH 311 (353)
T ss_pred cchhhhCcccccCcccccccccchhHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 000012346678999999999999999999999975
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK |
| >cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-35 Score=275.32 Aligned_cols=238 Identities=16% Similarity=0.211 Sum_probs=184.4
Q ss_pred CCCcccceeee--ecceecccccCCCc--hhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHhHhc
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESSD--LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLF 77 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~~--~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~ 77 (424)
|++|.||.+.+ .+..+++|++.... .....+.+|+.++++++||||+++++++...+..++||||+++ +|.+++.
T Consensus 11 g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~ 89 (284)
T cd07836 11 GTYATVYKGRNRTTGEIVALKEIHLDAEEGTPSTAIREISLMKELKHENIVRLHDVIHTENKLMLVFEYMDK-DLKKYMD 89 (284)
T ss_pred CCceEEEEEEECCCCeEEEEEEecccccccchHHHHHHHHHHHhhcCCCEeeeeeeEeeCCcEEEEEecCCc-cHHHHHH
Confidence 78999999987 46667777665432 2346778899999999999999999999999999999999985 8988875
Q ss_pred cCC-CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCC----CccccCccCCC
Q 014478 78 HWE-TQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG----KSYSTNLAFTP 152 (424)
Q Consensus 78 ~~~-~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~----~~~~gt~~y~a 152 (424)
... ...+++..+..++.|++.||.|||+++ ++||||||+||+++.++.++|+|||+++..... ....++..|++
T Consensus 90 ~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~-i~h~dl~p~ni~~~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~y~~ 168 (284)
T cd07836 90 THGVRGALDPNTVKSFTYQLLKGIAFCHENR-VLHRDLKPQNLLINKRGELKLADFGLARAFGIPVNTFSNEVVTLWYRA 168 (284)
T ss_pred hcCCCCCcCHHHHHHHHHHHHHHHHHHHHCC-eeeCCCCHHHEEECCCCcEEEeecchhhhhcCCccccccccccccccC
Confidence 422 246899999999999999999999999 999999999999999999999999998754322 23456889999
Q ss_pred ccccccC-CCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhH-----------hhh-cccCC-----------C
Q 014478 153 PEYMRTG-RVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLL-----------LMD-SALEG-----------H 208 (424)
Q Consensus 153 PE~~~~~-~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~-----------~~~-~~~~~-----------~ 208 (424)
||++.+. .++.++||||||+++|+|++|+.||............... ... ..... .
T Consensus 169 PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (284)
T cd07836 169 PDVLLGSRTYSTSIDIWSVGCIMAEMITGRPLFPGTNNEDQLLKIFRIMGTPTESTWPGISQLPEYKPTFPRYPPQDLQQ 248 (284)
T ss_pred hHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhHHHHhcCchhcccccCCChHHHHH
Confidence 9998754 4688999999999999999999887643211110000000 000 00000 0
Q ss_pred CCchhHHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 014478 209 FSNDEGTELVRLASRCLQSEARERPNAKSLVIS 241 (424)
Q Consensus 209 ~~~~~~~~l~~li~~cl~~dp~~Rps~~~~~~~ 241 (424)
..+..+..+.+++.+||+.||.+||++.+++.+
T Consensus 249 ~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~~ 281 (284)
T cd07836 249 LFPHADPLGIDLLHRLLQLNPELRISAHDALQH 281 (284)
T ss_pred HhhhcCcHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence 112346788999999999999999999999853
|
Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment. |
| >cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-35 Score=273.53 Aligned_cols=236 Identities=21% Similarity=0.224 Sum_probs=184.5
Q ss_pred CCCcccceeeee--cceecccccCCCc---hhhhHHHHHHHHHhcCCCcCcceeEEEEEeC--CeeeEEEecCCCCCHHh
Q 014478 2 GGRCSKFSICWF--HCHLKSSVLESSD---LGETLNLEEAKAVGNLRSERLANLIGCCYEA--DERLLVAEFMPNETLAK 74 (424)
Q Consensus 2 G~~g~v~~~~~~--~~~v~~~~~~~~~---~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~--~~~~lv~e~~~~gsL~~ 74 (424)
|++|.||++.+. +..+++|++..+. .....+.+|+++++.++||||+++++++... ...++||||+++ +|.+
T Consensus 10 g~~~~vy~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e~~~~-~l~~ 88 (287)
T cd07840 10 GTYGQVYKARNKKTGELVALKKIRMENEKEGFPITAIREIKLLQKLRHPNIVRLKEIVTSKGKGSIYMVFEYMDH-DLTG 88 (287)
T ss_pred CCCeEEEEEEECCCCeEEEEEEEecccccccchHHHHHHHHHHHhccCCCeeeheeeEecCCCCcEEEEeccccc-cHHH
Confidence 889999999984 4677777776542 2345688999999999999999999999987 789999999975 8999
Q ss_pred HhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCCC-----ccccCcc
Q 014478 75 HLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGK-----SYSTNLA 149 (424)
Q Consensus 75 ~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~~-----~~~gt~~ 149 (424)
++... ...+++.+++.++.||+.||.|||+++ ++|+||||+||++++++.++|+|||++....... ...++..
T Consensus 89 ~~~~~-~~~~~~~~~~~i~~~i~~al~~LH~~~-~~h~dl~p~nil~~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~ 166 (287)
T cd07840 89 LLDSP-EVKFTESQIKCYMKQLLEGLQYLHSNG-ILHRDIKGSNILINNDGVLKLADFGLARPYTKRNSADYTNRVITLW 166 (287)
T ss_pred HHhcc-CCCCCHHHHHHHHHHHHHHHHHHHHCC-ceeccCcHHHeEEcCCCCEEEccccceeeccCCCcccccccccccc
Confidence 88642 357999999999999999999999999 9999999999999999999999999988665432 2345788
Q ss_pred CCCccccccC-CCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhc-------------------------
Q 014478 150 FTPPEYMRTG-RVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDS------------------------- 203 (424)
Q Consensus 150 y~aPE~~~~~-~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~------------------------- 203 (424)
|+|||.+.+. .++.++||||||+++|+|++|+.|+........... .......
T Consensus 167 y~~PE~~~~~~~~~~~~Dv~slG~~l~el~t~~~p~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (287)
T cd07840 167 YRPPELLLGATRYGPEVDMWSVGCILAELFLGKPIFQGSTELEQLEK-IFELCGSPTDENWPGVSKLPWFENLKPKKPYK 245 (287)
T ss_pred cCCceeeEccccCChHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHH-HHHHhCCCchhhccccccchhhhhccccccch
Confidence 9999987753 578899999999999999999988764321111000 0000000
Q ss_pred -ccCCCCCchhHHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 014478 204 -ALEGHFSNDEGTELVRLASRCLQSEARERPNAKSLVIS 241 (424)
Q Consensus 204 -~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~~~~~ 241 (424)
.........++..+.+++.+||..+|.+||++++++.+
T Consensus 246 ~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~~ 284 (287)
T cd07840 246 RRLREFFKHLIDPSALDLLDKLLTLDPKKRISADQALQH 284 (287)
T ss_pred hHHHHHhcccCCHHHHHHHHHHcCCChhhCcCHHHHhhC
Confidence 00000111136789999999999999999999999854
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po |
| >PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-35 Score=316.08 Aligned_cols=237 Identities=22% Similarity=0.369 Sum_probs=186.9
Q ss_pred CCCcccceeee--ecceecccccCCCchhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHhHhccC
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESSDLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHW 79 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~ 79 (424)
|+||.||++.+ .+..|++|++..... ....|++.+++++|||||+++|+|.+.+..++||||+++|+|.+++.
T Consensus 701 G~~g~Vy~~~~~~~~~~vavK~~~~~~~---~~~~~~~~l~~l~HpnIv~~~~~~~~~~~~~lv~Ey~~~g~L~~~l~-- 775 (968)
T PLN00113 701 GKKGASYKGKSIKNGMQFVVKEINDVNS---IPSSEIADMGKLQHPNIVKLIGLCRSEKGAYLIHEYIEGKNLSEVLR-- 775 (968)
T ss_pred CCCeeEEEEEECCCCcEEEEEEccCCcc---ccHHHHHHHhhCCCCCcceEEEEEEcCCCCEEEEeCCCCCcHHHHHh--
Confidence 89999999986 567788887754332 22356899999999999999999999999999999999999999994
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHHH---hCCCcccccCCCCCeeecCCCCeEEccccccccCCCCCccccCccCCCcccc
Q 014478 80 ETQPMKWAMRLRVALYLAQALEYCS---SKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLAFTPPEYM 156 (424)
Q Consensus 80 ~~~~l~~~~~~~i~~qi~~~L~~lH---~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~gt~~y~aPE~~ 156 (424)
.++|.++.+++.|++.||.||| +.+ ++||||||+||+++.++..++. ||............+|..|||||++
T Consensus 776 ---~l~~~~~~~i~~~ia~~L~yLH~~~~~~-iiH~dlkp~Nil~~~~~~~~~~-~~~~~~~~~~~~~~~t~~y~aPE~~ 850 (968)
T PLN00113 776 ---NLSWERRRKIAIGIAKALRFLHCRCSPA-VVVGNLSPEKIIIDGKDEPHLR-LSLPGLLCTDTKCFISSAYVAPETR 850 (968)
T ss_pred ---cCCHHHHHHHHHHHHHHHHHhccCCCCC-eecCCCCHHhEEECCCCceEEE-eccccccccCCCccccccccCcccc
Confidence 3899999999999999999999 557 9999999999999998887775 6665544444445788999999999
Q ss_pred ccCCCCCCcceehhHHHHHHHhhCCCCCCchhhH-----HHh-----hhhhhHhhhcccCC--CCCchhHHHHHHHHHHh
Q 014478 157 RTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALD-----LIR-----SKNFLLLMDSALEG--HFSNDEGTELVRLASRC 224 (424)
Q Consensus 157 ~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~-----~~~-----~~~~~~~~~~~~~~--~~~~~~~~~l~~li~~c 224 (424)
.+..++.++|||||||++|||++|+.|+...... .+. ........++.... ..+.....++.+++.+|
T Consensus 851 ~~~~~~~~sDv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C 930 (968)
T PLN00113 851 ETKDITEKSDIYGFGLILIELLTGKSPADAEFGVHGSIVEWARYCYSDCHLDMWIDPSIRGDVSVNQNEIVEVMNLALHC 930 (968)
T ss_pred cCCCCCcccchhhHHHHHHHHHhCCCCCCcccCCCCcHHHHHHHhcCccchhheeCccccCCCCccHHHHHHHHHHHHhh
Confidence 9889999999999999999999999887432100 000 01111112222211 12234456788999999
Q ss_pred cccCcCCCCCHHHHHHHHHHHhhh
Q 014478 225 LQSEARERPNAKSLVISLMSLQKE 248 (424)
Q Consensus 225 l~~dp~~Rps~~~~~~~l~~~~~~ 248 (424)
|+.||++|||++++++.|+.+.+.
T Consensus 931 l~~~P~~RPt~~evl~~L~~~~~~ 954 (968)
T PLN00113 931 TATDPTARPCANDVLKTLESASRS 954 (968)
T ss_pred CcCCchhCcCHHHHHHHHHHhhcc
Confidence 999999999999999999887653
|
|
| >cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-35 Score=277.33 Aligned_cols=238 Identities=13% Similarity=0.152 Sum_probs=182.0
Q ss_pred CCCcccceeee----ecceecccccCCCc----hhhhHHHHHHHHHhcCCCcCcceeEEEEEeC--CeeeEEEecCCCCC
Q 014478 2 GGRCSKFSICW----FHCHLKSSVLESSD----LGETLNLEEAKAVGNLRSERLANLIGCCYEA--DERLLVAEFMPNET 71 (424)
Q Consensus 2 G~~g~v~~~~~----~~~~v~~~~~~~~~----~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~--~~~~lv~e~~~~gs 71 (424)
|++|.||.+.+ .+..+++|.+.... .....+.+|+.++..++||||+++++++... ...++||||+++ +
T Consensus 11 g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~~~~-~ 89 (316)
T cd07842 11 GTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHENVVSLVEVFLEHADKSVYLLFDYAEH-D 89 (316)
T ss_pred CCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhcCCCCccceEEEEeCCCCceEEEEEeCCCc-C
Confidence 88999999998 34678888776532 2245678899999999999999999999987 779999999975 7
Q ss_pred HHhHhccC---CCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecC----CCCeEEccccccccCCCC---
Q 014478 72 LAKHLFHW---ETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDK----DGNPRLSSFGLMKNSRDG--- 141 (424)
Q Consensus 72 L~~~l~~~---~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~----~~~~kl~Dfg~~~~~~~~--- 141 (424)
|.+++... ....+++..++.++.|++.||.|||+++ ++||||||+||+++. ++.+||+|||++......
T Consensus 90 l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~-i~h~dlkp~Nil~~~~~~~~~~~kl~Dfg~~~~~~~~~~~ 168 (316)
T cd07842 90 LWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLHSNW-VLHRDLKPANILVMGEGPERGVVKIGDLGLARLFNAPLKP 168 (316)
T ss_pred HHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHHhCC-EeeCCCCHHHEEEcCCCCccceEEECCCccccccCCCccc
Confidence 77766421 2237899999999999999999999999 999999999999998 899999999998865432
Q ss_pred ----CccccCccCCCccccccC-CCCCCcceehhHHHHHHHhhCCCCCCchhhHH--------Hhhhhh-----------
Q 014478 142 ----KSYSTNLAFTPPEYMRTG-RVTPESVVYSFGTMLLDLLSGKHIPPSHALDL--------IRSKNF----------- 197 (424)
Q Consensus 142 ----~~~~gt~~y~aPE~~~~~-~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~--------~~~~~~----------- 197 (424)
....++..|+|||++.+. .++.++|||||||++++|++|..||....... ......
T Consensus 169 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 248 (316)
T cd07842 169 LADLDPVVVTIWYRAPELLLGARHYTKAIDIWAIGCIFAELLTLEPIFKGREAKIKKSNPFQRDQLERIFEVLGTPTEKD 248 (316)
T ss_pred ccccCCccccccccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhcCCCCcCCcccccccchhHHHHHHHHHHHhCCCchhH
Confidence 223567889999988764 47889999999999999999998876432111 000000
Q ss_pred ----------hHhhhcccCCCCC-----------chhHHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 014478 198 ----------LLLMDSALEGHFS-----------NDEGTELVRLASRCLQSEARERPNAKSLVIS 241 (424)
Q Consensus 198 ----------~~~~~~~~~~~~~-----------~~~~~~l~~li~~cl~~dp~~Rps~~~~~~~ 241 (424)
....+.......+ ...+.++.+++.+||+.||++|||+.+++.+
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~eil~~ 313 (316)
T cd07842 249 WPDIKKMPEYDTLMKDFKTKTYPSNSLAKWMEKHKKPDSQGFDLLRKLLEYDPTKRITAEEALEH 313 (316)
T ss_pred HHHHhhcccchhhhhhccCCCCCCccHHHHHHhccCCCHHHHHHHHHHhcCCcccCcCHHHHhcC
Confidence 0000000011111 0345678999999999999999999999854
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the |
| >cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-35 Score=274.53 Aligned_cols=237 Identities=18% Similarity=0.220 Sum_probs=186.0
Q ss_pred CCCcccceeeee-----cceecccccCCC-----chhhhHHHHHHHHHhcC-CCcCcceeEEEEEeCCeeeEEEecCCCC
Q 014478 2 GGRCSKFSICWF-----HCHLKSSVLESS-----DLGETLNLEEAKAVGNL-RSERLANLIGCCYEADERLLVAEFMPNE 70 (424)
Q Consensus 2 G~~g~v~~~~~~-----~~~v~~~~~~~~-----~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~~~~g 70 (424)
|++|.||.+.+. +..+++|++... ....+.+.+|++++.++ +||||+++++.+..+...++||||+++|
T Consensus 11 G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~ 90 (288)
T cd05583 11 GAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQTDTKLHLILDYVNGG 90 (288)
T ss_pred CCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheeeecCCEEEEEEecCCCC
Confidence 889999988763 345666666432 22345788999999999 6999999999999999999999999999
Q ss_pred CHHhHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCCC-----ccc
Q 014478 71 TLAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGK-----SYS 145 (424)
Q Consensus 71 sL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~~-----~~~ 145 (424)
+|.+++.. ...+++..+..++.|++.+|.|||+.+ ++||||||+||+++.++.++|+|||+++...... ...
T Consensus 91 ~L~~~~~~--~~~~~~~~~~~~~~ql~~~l~~lH~~~-~~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~ 167 (288)
T cd05583 91 ELFTHLYQ--REHFTESEVRVYIAEIVLALDHLHQLG-IIYRDIKLENILLDSEGHVVLTDFGLSKEFLAEEEERAYSFC 167 (288)
T ss_pred cHHHHHhh--cCCcCHHHHHHHHHHHHHHHHHHHHCC-eeccCCCHHHeEECCCCCEEEEECcccccccccccccccccc
Confidence 99999864 456899999999999999999999999 9999999999999999999999999987644322 235
Q ss_pred cCccCCCccccccCC--CCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHHHHHHHHH
Q 014478 146 TNLAFTPPEYMRTGR--VTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASR 223 (424)
Q Consensus 146 gt~~y~aPE~~~~~~--~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 223 (424)
++..|++||.+.+.. .+.++||||||+++|+|++|..|+.................. .....+..++..+.+++.+
T Consensus 168 ~~~~y~aPE~~~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~li~~ 245 (288)
T cd05583 168 GTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGASPFTVDGEQNSQSEISRRILK--SKPPFPKTMSAEARDFIQK 245 (288)
T ss_pred CCccccCHHHhcCCCCCCcchhhhHHHHHHHHHHHhCCCCcccCcccchHHHHHHHHHc--cCCCCCcccCHHHHHHHHH
Confidence 788999999987655 788999999999999999999887532111000111111111 1123445567889999999
Q ss_pred hcccCcCCCCCHHHHHHHHH
Q 014478 224 CLQSEARERPNAKSLVISLM 243 (424)
Q Consensus 224 cl~~dp~~Rps~~~~~~~l~ 243 (424)
||+.||++|||+.++...|.
T Consensus 246 ~l~~~p~~R~t~~~~~~~l~ 265 (288)
T cd05583 246 LLEKDPKKRLGANGADEIKN 265 (288)
T ss_pred HhcCCHhhccCcchHHHHhc
Confidence 99999999999877765543
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines |
| >cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-35 Score=268.22 Aligned_cols=230 Identities=21% Similarity=0.241 Sum_probs=189.6
Q ss_pred CCCcccceeeee--cceecccccCCCch----hhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHhH
Q 014478 2 GGRCSKFSICWF--HCHLKSSVLESSDL----GETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKH 75 (424)
Q Consensus 2 G~~g~v~~~~~~--~~~v~~~~~~~~~~----~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~ 75 (424)
|++|.||.+.+. +..+++|++..... ....+..|++++++++||||+++++.+..+...++||||+++++|.++
T Consensus 4 G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~ 83 (250)
T cd05123 4 GSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVKLHYAFQTEEKLYLVLEYAPGGELFSH 83 (250)
T ss_pred CCceEEEEEEECCCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcCCCcHHHHHHHeecCCeeEEEEecCCCCcHHHH
Confidence 889999999884 56667666644332 355888999999999999999999999999999999999999999999
Q ss_pred hccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCC----CccccCccCC
Q 014478 76 LFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG----KSYSTNLAFT 151 (424)
Q Consensus 76 l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~----~~~~gt~~y~ 151 (424)
+.. ...+++..+..++.|++.||.|||+.+ ++|+||+|+||+++.++.++|+|||++...... ....++..|+
T Consensus 84 l~~--~~~l~~~~~~~~~~qi~~~l~~lh~~~-~~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~ 160 (250)
T cd05123 84 LSK--EGRFSEERARFYAAEIVLALEYLHSLG-IIYRDLKPENILLDADGHIKLTDFGLAKELSSEGSRTNTFCGTPEYL 160 (250)
T ss_pred HHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC-ceecCCCcceEEEcCCCcEEEeecCcceecccCCCcccCCcCCcccc
Confidence 964 346899999999999999999999999 999999999999999999999999998765442 2346788999
Q ss_pred CccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHHHHHHHHHhcccCcCC
Q 014478 152 PPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARE 231 (424)
Q Consensus 152 aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~ 231 (424)
+||...+...+.++|+||||+++|++++|..||....... ....... .....+...+..+.+++.+||..||++
T Consensus 161 ~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~----~~~~~~~--~~~~~~~~~~~~l~~~i~~~l~~~p~~ 234 (250)
T cd05123 161 APEVLLGKGYGKAVDWWSLGVLLYEMLTGKPPFYAEDRKE----IYEKILK--DPLRFPEFLSPEARDLISGLLQKDPTK 234 (250)
T ss_pred ChHHhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHH----HHHHHhc--CCCCCCCCCCHHHHHHHHHHhcCCHhh
Confidence 9999988888999999999999999999998876532111 1111111 223455566889999999999999999
Q ss_pred CCCH---HHHHH
Q 014478 232 RPNA---KSLVI 240 (424)
Q Consensus 232 Rps~---~~~~~ 240 (424)
||++ ++++.
T Consensus 235 R~~~~~~~~l~~ 246 (250)
T cd05123 235 RLGSGGAEEIKA 246 (250)
T ss_pred CCCcccHHHHHh
Confidence 9999 55543
|
Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the |
| >cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-35 Score=273.83 Aligned_cols=235 Identities=18% Similarity=0.221 Sum_probs=185.7
Q ss_pred CCCcccceeee-----ecceecccccCCCc-----hhhhHHHHHHHHHhcC-CCcCcceeEEEEEeCCeeeEEEecCCCC
Q 014478 2 GGRCSKFSICW-----FHCHLKSSVLESSD-----LGETLNLEEAKAVGNL-RSERLANLIGCCYEADERLLVAEFMPNE 70 (424)
Q Consensus 2 G~~g~v~~~~~-----~~~~v~~~~~~~~~-----~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~~~~g 70 (424)
|++|.||.+.+ .+..+++|++.... ...+.+.+|++++.++ +|+||+++++.+..+...++||||++++
T Consensus 11 G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~~~~~ 90 (290)
T cd05613 11 GAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTDTKLHLILDYINGG 90 (290)
T ss_pred CCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEeecCCeEEEEEecCCCC
Confidence 88999998876 45667777765422 2346678899999999 6999999999999998899999999999
Q ss_pred CHHhHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCC-----Cccc
Q 014478 71 TLAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG-----KSYS 145 (424)
Q Consensus 71 sL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~-----~~~~ 145 (424)
+|.+++.. ..++++..+..++.|++.||.|||+.+ ++||||+|+|||++.++.+||+|||++...... ....
T Consensus 91 ~L~~~l~~--~~~l~~~~~~~~~~qi~~al~~lH~~~-i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~ 167 (290)
T cd05613 91 ELFTHLSQ--RERFKEQEVQIYSGEIVLALEHLHKLG-IIYRDIKLENILLDSNGHVVLTDFGLSKEFHEDEVERAYSFC 167 (290)
T ss_pred cHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHhCC-eeccCCCHHHeEECCCCCEEEeeCccceeccccccccccccc
Confidence 99999864 456889999999999999999999999 999999999999999999999999998765432 2345
Q ss_pred cCccCCCccccccC--CCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHHHHHHHHH
Q 014478 146 TNLAFTPPEYMRTG--RVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASR 223 (424)
Q Consensus 146 gt~~y~aPE~~~~~--~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 223 (424)
|+..|+|||.+.+. .++.++||||||+++|+|++|..|+......... ......... .....+..+++.+.+++.+
T Consensus 168 ~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~ll~~ 245 (290)
T cd05613 168 GTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGASPFTVDGEKNSQ-AEISRRILK-SEPPYPQEMSALAKDIIQR 245 (290)
T ss_pred CCcccCChhhccCCCCCCCccccHHHHHHHHHHHhcCCCCCCcCCccccH-HHHHHHhhc-cCCCCCccCCHHHHHHHHH
Confidence 78899999998753 4678999999999999999999887532111000 111111111 1123455677889999999
Q ss_pred hcccCcCCCC-----CHHHHHHH
Q 014478 224 CLQSEARERP-----NAKSLVIS 241 (424)
Q Consensus 224 cl~~dp~~Rp-----s~~~~~~~ 241 (424)
||..||++|| ++++++.+
T Consensus 246 ~l~~~p~~R~~~~~~~~~~l~~~ 268 (290)
T cd05613 246 LLMKDPKKRLGCGPSDADEIKKH 268 (290)
T ss_pred HhcCCHHHhcCCCCCCHHHHHcC
Confidence 9999999997 67777654
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph |
| >cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-35 Score=270.58 Aligned_cols=234 Identities=14% Similarity=0.190 Sum_probs=184.8
Q ss_pred CCCCcccceeeeecc--eecccccCC------CchhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCH
Q 014478 1 MGGRCSKFSICWFHC--HLKSSVLES------SDLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETL 72 (424)
Q Consensus 1 ~G~~g~v~~~~~~~~--~v~~~~~~~------~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL 72 (424)
.|++|.||.+.+... .++++++.. .......+..|+.+++.++||||+++++++.+....++||||+++++|
T Consensus 10 ~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l 89 (260)
T cd08222 10 KGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDHPAIVKFHASFLERDAFCIITEYCEGRDL 89 (260)
T ss_pred CCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhCCCCcHHHHHHHHhcCCceEEEEEeCCCCCH
Confidence 389999999887443 233333321 122334577899999999999999999999988889999999999999
Q ss_pred HhHhcc--CCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCC----Ccccc
Q 014478 73 AKHLFH--WETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG----KSYST 146 (424)
Q Consensus 73 ~~~l~~--~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~----~~~~g 146 (424)
.+++.. .....+++.++..++.|++.||.|||+++ ++|+||||+||+++. +.++|+|||+++..... ....+
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~-i~h~~l~~~nili~~-~~~~l~d~g~~~~~~~~~~~~~~~~~ 167 (260)
T cd08222 90 DCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMHQRR-ILHRDLKAKNIFLKN-NLLKIGDFGVSRLLMGSCDLATTFTG 167 (260)
T ss_pred HHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcC-ccccCCChhheEeec-CCEeecccCceeecCCCcccccCCCC
Confidence 998853 13457899999999999999999999999 999999999999975 56999999998765432 23457
Q ss_pred CccCCCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHHHHHHHHHhcc
Q 014478 147 NLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQ 226 (424)
Q Consensus 147 t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~ 226 (424)
+..|+|||.+.+..++.++|+||||+++|+|++|..|+....... .... .........+..++.++.++|.+||.
T Consensus 168 ~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~~~~~~~~~~~~~----~~~~-~~~~~~~~~~~~~~~~~~~li~~~l~ 242 (260)
T cd08222 168 TPYYMSPEALKHQGYDSKSDIWSLGCILYEMCCLAHAFEGQNFLS----VVLR-IVEGPTPSLPETYSRQLNSIMQSMLN 242 (260)
T ss_pred CcCccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCccHHH----HHHH-HHcCCCCCCcchhcHHHHHHHHHHhc
Confidence 889999999987788999999999999999999998876431111 1111 11122333455678899999999999
Q ss_pred cCcCCCCCHHHHHHH
Q 014478 227 SEARERPNAKSLVIS 241 (424)
Q Consensus 227 ~dp~~Rps~~~~~~~ 241 (424)
.||++||++.+++.+
T Consensus 243 ~~p~~Rp~~~~il~~ 257 (260)
T cd08222 243 KDPSLRPSAAEILRN 257 (260)
T ss_pred CChhhCcCHHHHhhC
Confidence 999999999999864
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check |
| >KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.9e-36 Score=285.59 Aligned_cols=185 Identities=18% Similarity=0.165 Sum_probs=162.6
Q ss_pred CCCcccceeee--ecceecccccCC--CchhhhHHHHHHHHHhcCCCcCcceeEEEEEeCC------eeeEEEecCCCCC
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLES--SDLGETLNLEEAKAVGNLRSERLANLIGCCYEAD------ERLLVAEFMPNET 71 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~------~~~lv~e~~~~gs 71 (424)
||||.||++.. .|..||+|.+.. .....+...+|+++|++|+|||||+++++-.+.. ...+|||||.|||
T Consensus 24 Ga~g~V~rgrnketG~~vAvK~~~~~~~~r~~e~~~~EieilkKLnh~NIVk~f~iee~~~~~~~~~~~vlvmEyC~gGs 103 (732)
T KOG4250|consen 24 GAFGNVYRGRNKETGRLVAVKTFNKESSLRPRERWCREIEILKKLNHPNIVKLFDIEETKFLGLVTRLPVLVMEYCSGGS 103 (732)
T ss_pred CccceeeeecccccccchhHHhhhhhcccchHHHHHHHHHHHHHcCchhhhhhcccCCccccCcccccceEEEeecCCCc
Confidence 99999999986 788899998854 3455788889999999999999999999866543 5689999999999
Q ss_pred HHhHhccC-CCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeee--cCCCC--eEEccccccccCCCCC---c
Q 014478 72 LAKHLFHW-ETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILF--DKDGN--PRLSSFGLMKNSRDGK---S 143 (424)
Q Consensus 72 L~~~l~~~-~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill--~~~~~--~kl~Dfg~~~~~~~~~---~ 143 (424)
|..++.+. +..++++.+.+.++.+++.||.|||+++ |+||||||.||++ ..+|. -||+|||.|+...+.+ +
T Consensus 104 L~~~L~~PEN~~GLpE~e~l~lL~d~~~al~~LrEn~-IvHRDlKP~NIvl~~Gedgq~IyKLtDfG~Arel~d~s~~~S 182 (732)
T KOG4250|consen 104 LRKVLNSPENAYGLPESEFLDLLSDLVSALRHLRENG-IVHRDLKPGNIVLQIGEDGQSIYKLTDFGAARELDDNSLFTS 182 (732)
T ss_pred HHHHhcCcccccCCCHHHHHHHHHHHHHHHHHHHHcC-ceeccCCCCcEEEeecCCCceEEeeecccccccCCCCCeeee
Confidence 99999754 3458999999999999999999999999 9999999999999 34453 6999999999988764 5
Q ss_pred cccCccCCCcccccc-CCCCCCcceehhHHHHHHHhhCCCCCCch
Q 014478 144 YSTNLAFTPPEYMRT-GRVTPESVVYSFGTMLLDLLSGKHIPPSH 187 (424)
Q Consensus 144 ~~gt~~y~aPE~~~~-~~~~~~~Dv~slG~~l~el~~g~~~~~~~ 187 (424)
..||..|.+||.+.. +.|+..+|.|||||++|+++||..||-..
T Consensus 183 ~vGT~~YLhPel~E~q~~y~~tVDLWS~GvtlY~caTG~lPF~p~ 227 (732)
T KOG4250|consen 183 LVGTEEYLHPELYERQKKYTATVDLWSFGVTLYECATGELPFIPF 227 (732)
T ss_pred ecCchhhcChHHHhhccCcCceeehhhhhhHHHHHhccCCCCCcC
Confidence 679999999999994 78999999999999999999999988653
|
|
| >cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-35 Score=274.39 Aligned_cols=237 Identities=19% Similarity=0.219 Sum_probs=186.0
Q ss_pred CCCcccceeee--ecceecccccCCCch---hhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHhHh
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESSDL---GETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHL 76 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~~~---~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~l 76 (424)
|++|.||++.. .+..+++|.+..... ....+.+|++++++++|+||+++++++..+...++||||+++ +|.+++
T Consensus 10 g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~-~l~~~l 88 (283)
T cd05118 10 GTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELNHPNIIKLLDVFRHKGDLYLVFEFMDT-DLYKLI 88 (283)
T ss_pred CCCceEEEEEcCCCCcEEEEEEeccccccchhHHHHHHHHHHHHHhcCCCcchHHHhhccCCCEEEEEeccCC-CHHHHH
Confidence 78999999987 455566666644332 356788899999999999999999999999999999999976 888888
Q ss_pred ccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCCC----ccccCccCCC
Q 014478 77 FHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGK----SYSTNLAFTP 152 (424)
Q Consensus 77 ~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~~----~~~gt~~y~a 152 (424)
.. ....+++.++..++.|++.||.|||+++ ++|+||||+||+++.++.++|+|||.+....... ...++..|+|
T Consensus 89 ~~-~~~~~~~~~~~~~~~~i~~~l~~LH~~~-i~H~dl~p~nili~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~ 166 (283)
T cd05118 89 KD-RQRGLPESLIKSYLYQLLQGLAFCHSHG-ILHRDLKPENLLINTEGVLKLADFGLARSFGSPVRPYTHYVVTRWYRA 166 (283)
T ss_pred Hh-hcccCCHHHHHHHHHHHHHHHHHHHHCC-eeecCcCHHHEEECCCCcEEEeeeeeeEecCCCcccccCccCcccccC
Confidence 65 2357999999999999999999999999 9999999999999999999999999987665432 3456788999
Q ss_pred ccccccC-CCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhH-----------hhh------ccc-------CC
Q 014478 153 PEYMRTG-RVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLL-----------LMD------SAL-------EG 207 (424)
Q Consensus 153 PE~~~~~-~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~-----------~~~------~~~-------~~ 207 (424)
||.+.+. ..+.++|+||||+++|+|++|+.||+.......-...... ... ... ..
T Consensus 167 PE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (283)
T cd05118 167 PELLLGDKGYSTPVDIWSVGCIFAELLSRRPLFPGKSEIDQLFKIFRTLGTPDPEVWPKFTSLARNYKFSFPKKAGMPLP 246 (283)
T ss_pred cHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCchHhcccchhhhhhhhhhhccccccCHH
Confidence 9998876 6889999999999999999999887653211100000000 000 000 00
Q ss_pred CCCchhHHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 014478 208 HFSNDEGTELVRLASRCLQSEARERPNAKSLVIS 241 (424)
Q Consensus 208 ~~~~~~~~~l~~li~~cl~~dp~~Rps~~~~~~~ 241 (424)
.....++.++.++|.+||..||.+||++.+++.+
T Consensus 247 ~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~ll~~ 280 (283)
T cd05118 247 KLFPNASPQALDLLSQMLHYDPHKRITAEQALAH 280 (283)
T ss_pred HhhhhhCHHHHHHHHHHhccCcccCcCHHHHhhC
Confidence 1122457789999999999999999999999854
|
Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They |
| >cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-35 Score=274.14 Aligned_cols=231 Identities=19% Similarity=0.231 Sum_probs=190.6
Q ss_pred CCCcccceeee--ecceecccccCCC----chhhhHHHHHHHHHhcCC-CcCcceeEEEEEeCCeeeEEEecCCCCCHHh
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESS----DLGETLNLEEAKAVGNLR-SERLANLIGCCYEADERLLVAEFMPNETLAK 74 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~----~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~ 74 (424)
|++|.||.+.+ .+..+++|++..+ ......+.+|++++++++ ||||+++++++..++..++||||+++++|.+
T Consensus 12 g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~ 91 (280)
T cd05581 12 GSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQDEENLYFVLEYAPNGELLQ 91 (280)
T ss_pred CCceEEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHHHHhcCCceEEEEEcCCCCCcHHH
Confidence 89999999987 5677777776542 233467888999999998 9999999999999999999999999999999
Q ss_pred HhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCCC------------
Q 014478 75 HLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGK------------ 142 (424)
Q Consensus 75 ~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~~------------ 142 (424)
++.. ...+++..+..++.|++.||.+||+.+ ++|+||+|+||+++.++.++|+|||++.......
T Consensus 92 ~l~~--~~~l~~~~~~~i~~ql~~~l~~Lh~~~-~~H~dl~~~ni~i~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~ 168 (280)
T cd05581 92 YIRK--YGSLDEKCTRFYAAEILLALEYLHSKG-IIHRDLKPENILLDKDMHIKITDFGTAKVLDPNSSPESNKGDATNI 168 (280)
T ss_pred HHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-eeecCCCHHHeEECCCCCEEecCCccccccCCccccccCCCCCccc
Confidence 9965 447999999999999999999999999 9999999999999999999999999987544321
Q ss_pred ------------ccccCccCCCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhcccCCCCC
Q 014478 143 ------------SYSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFS 210 (424)
Q Consensus 143 ------------~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 210 (424)
...++..|+|||++....++.++|+||||++++++++|..|+...... ..+.... ......+
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~----~~~~~~~--~~~~~~~ 242 (280)
T cd05581 169 DSQIEKNRRRFASFVGTAEYVSPELLNEKPAGKSSDLWALGCIIYQMLTGKPPFRGSNEY----LTFQKIL--KLEYSFP 242 (280)
T ss_pred cccccccccccccccCCccccCHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCccHH----HHHHHHH--hcCCCCC
Confidence 124578899999998888899999999999999999999887654211 1111111 1223455
Q ss_pred chhHHHHHHHHHHhcccCcCCCCCH----HHHHHH
Q 014478 211 NDEGTELVRLASRCLQSEARERPNA----KSLVIS 241 (424)
Q Consensus 211 ~~~~~~l~~li~~cl~~dp~~Rps~----~~~~~~ 241 (424)
...++.+.+++.+||+.||.+|||+ ++++.+
T Consensus 243 ~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~ll~~ 277 (280)
T cd05581 243 PNFPPDAKDLIEKLLVLDPQDRLGVNEGYDELKAH 277 (280)
T ss_pred CccCHHHHHHHHHHhcCCHhhCCCcccCHHHHhcC
Confidence 5668899999999999999999999 887654
|
Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto |
| >cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-35 Score=281.20 Aligned_cols=235 Identities=16% Similarity=0.218 Sum_probs=181.0
Q ss_pred CCCcccceeee--ecceecccccCCC--chhhhHHHHHHHHHhcCCCcCcceeEEEEEeCC-----eeeEEEecCCCCCH
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESS--DLGETLNLEEAKAVGNLRSERLANLIGCCYEAD-----ERLLVAEFMPNETL 72 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~--~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-----~~~lv~e~~~~gsL 72 (424)
|++|.||.+.+ .+..+++|++... ......+.+|+.++++++||||+++++++.... ..++||||+++ +|
T Consensus 16 G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e~~~~-~l 94 (336)
T cd07849 16 GAYGMVCSATHKPTGVKVAIKKISPFEHQTFCQRTLREIKILRRFKHENIIGILDIIRPPSFESFNDVYIVQELMET-DL 94 (336)
T ss_pred cCCeEEEEEEEcCCCCeEEEEEecccccchhHHHHHHHHHHHHhCCCCCcCchhheeecccccccceEEEEehhccc-CH
Confidence 89999999987 5667777776532 233456888999999999999999999876543 47899999975 88
Q ss_pred HhHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCC-------Cccc
Q 014478 73 AKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG-------KSYS 145 (424)
Q Consensus 73 ~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~-------~~~~ 145 (424)
.+++. ...+++..+..++.|++.||.|||+.+ ++||||||+||+++.++.+||+|||+++..... ....
T Consensus 95 ~~~~~---~~~l~~~~~~~i~~ql~~aL~~LH~~~-ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~ 170 (336)
T cd07849 95 YKLIK---TQHLSNDHIQYFLYQILRGLKYIHSAN-VLHRDLKPSNLLLNTNCDLKICDFGLARIADPEHDHTGFLTEYV 170 (336)
T ss_pred HHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhCC-eeccCCCHHHEEECCCCCEEECcccceeeccccccccCCcCCcC
Confidence 88874 457999999999999999999999999 999999999999999999999999998765432 1235
Q ss_pred cCccCCCcccccc-CCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhh-----------hhhhH--------hhhcc-
Q 014478 146 TNLAFTPPEYMRT-GRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRS-----------KNFLL--------LMDSA- 204 (424)
Q Consensus 146 gt~~y~aPE~~~~-~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~-----------~~~~~--------~~~~~- 204 (424)
+|..|+|||.+.+ ..++.++|||||||++|+|++|+.||+......... ..... .....
T Consensus 171 ~~~~y~aPE~~~~~~~~~~~~DvwslGvil~el~~G~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (336)
T cd07849 171 ATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEMLSNRPLFPGKDYLHQLNLILGVLGTPSQEDLNCIISLRARNYIKSLP 250 (336)
T ss_pred cCCCccChHHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHHhhchhhhhHHhhcC
Confidence 7889999998764 458889999999999999999998876531110000 00000 00000
Q ss_pred cCCC-----CCchhHHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 014478 205 LEGH-----FSNDEGTELVRLASRCLQSEARERPNAKSLVIS 241 (424)
Q Consensus 205 ~~~~-----~~~~~~~~l~~li~~cl~~dp~~Rps~~~~~~~ 241 (424)
.... ..+..++++.+++.+||+.||++|||+.+++.+
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~e~l~h 292 (336)
T cd07849 251 FKPKVPWNKLFPNADPKALDLLDKMLTFNPHKRITVEEALAH 292 (336)
T ss_pred cCCcccHHHHhcccCcHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 0000 012346779999999999999999999999976
|
Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase |
| >cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-35 Score=273.36 Aligned_cols=236 Identities=17% Similarity=0.256 Sum_probs=183.9
Q ss_pred CCCcccceeeee--cceecccccCCCc--hhhhHHHHHHHHHhcC-CCcCcceeEEEEEeCCeeeEEEecCCCCCHHhHh
Q 014478 2 GGRCSKFSICWF--HCHLKSSVLESSD--LGETLNLEEAKAVGNL-RSERLANLIGCCYEADERLLVAEFMPNETLAKHL 76 (424)
Q Consensus 2 G~~g~v~~~~~~--~~~v~~~~~~~~~--~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~l 76 (424)
|++|.||.+.+. +..+++|.+.... .....+..|+.++..+ .||||++++++|..+...++||||+.+ +|.+++
T Consensus 26 g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~~-~l~~l~ 104 (296)
T cd06618 26 GTCGQVYKMRFKKTGHVMAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVKCYGYFITDSDVFICMELMST-CLDKLL 104 (296)
T ss_pred cCCeEEEEEEECCCCeEEEEEEEeccCChHHHHHHHHHHHHHHhccCCCchHhhheeeecCCeEEEEeeccCc-CHHHHH
Confidence 889999999985 7778888775433 2345667788777777 599999999999999999999999854 787776
Q ss_pred ccCCCCCCCHHHHHHHHHHHHHHHHHHHh-CCCcccccCCCCCeeecCCCCeEEccccccccCCCC---CccccCccCCC
Q 014478 77 FHWETQPMKWAMRLRVALYLAQALEYCSS-KGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG---KSYSTNLAFTP 152 (424)
Q Consensus 77 ~~~~~~~l~~~~~~~i~~qi~~~L~~lH~-~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~---~~~~gt~~y~a 152 (424)
.. ....+++..+..++.|++.||.|||+ .+ ++||||+|+||+++.++.+||+|||++...... ....++..|+|
T Consensus 105 ~~-~~~~l~~~~~~~i~~~i~~~l~~lH~~~~-i~H~dl~p~nill~~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~y~a 182 (296)
T cd06618 105 KR-IQGPIPEDILGKMTVAIVKALHYLKEKHG-VIHRDVKPSNILLDASGNVKLCDFGISGRLVDSKAKTRSAGCAAYMA 182 (296)
T ss_pred HH-hcCCCCHHHHHHHHHHHHHHHHHHHhhCC-EecCCCcHHHEEEcCCCCEEECccccchhccCCCcccCCCCCccccC
Confidence 54 23578999999999999999999998 47 999999999999999999999999998765432 22346789999
Q ss_pred ccccccCC----CCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhcc-cCCCCCchhHHHHHHHHHHhccc
Q 014478 153 PEYMRTGR----VTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSA-LEGHFSNDEGTELVRLASRCLQS 227 (424)
Q Consensus 153 PE~~~~~~----~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~li~~cl~~ 227 (424)
||++.+.. ++.++||||||+++|+|++|+.||...... . .......... ........++.++.+++.+||..
T Consensus 183 PE~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~-~--~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~ 259 (296)
T cd06618 183 PERIDPPDPNPKYDIRADVWSLGISLVELATGQFPYKNCKTE-F--EVLTKILQEEPPSLPPNEGFSPDFCSFVDLCLTK 259 (296)
T ss_pred HhhcCCCCCccccccchhHHHHHHHHHHHHhCCCCCCcchhH-H--HHHHHHhcCCCCCCCCCCCCCHHHHHHHHHHccC
Confidence 99987543 788999999999999999999887652111 0 1111111111 11111224678899999999999
Q ss_pred CcCCCCCHHHHHHHHH
Q 014478 228 EARERPNAKSLVISLM 243 (424)
Q Consensus 228 dp~~Rps~~~~~~~l~ 243 (424)
||++||++.+++.+..
T Consensus 260 ~p~~Rp~~~~il~~~~ 275 (296)
T cd06618 260 DHRKRPKYRELLQHPF 275 (296)
T ss_pred ChhhCCCHHHHhcChh
Confidence 9999999999987643
|
Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it |
| >cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-35 Score=278.65 Aligned_cols=235 Identities=18% Similarity=0.204 Sum_probs=181.2
Q ss_pred CCCcccceeee--ecceecccccCC---CchhhhHHHHHHHHHhcC-CCcCcceeEEEEEeC--CeeeEEEecCCCCCHH
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLES---SDLGETLNLEEAKAVGNL-RSERLANLIGCCYEA--DERLLVAEFMPNETLA 73 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~---~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~--~~~~lv~e~~~~gsL~ 73 (424)
|++|.||++.+ .+..+++|++.. .......+.+|+.+++++ +||||++++++|... ...++||||+++ +|.
T Consensus 18 g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~~~~~~~lv~e~~~~-~L~ 96 (337)
T cd07852 18 GAYGIVWKAIDRRTKEVVALKKIFDAFRNATDAQRTFREIMFLQELGDHPNIVKLLNVIKAENDKDIYLVFEYMET-DLH 96 (337)
T ss_pred CCCeeEEEEEEcCCCeEEEEEeeccccCcchhhhhhhHHHHHHHHhcCCCCccceeeeeccCCCceEEEEeccccc-CHH
Confidence 88999999987 456677776643 223445677899999999 999999999998653 367999999975 999
Q ss_pred hHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCCC---------cc
Q 014478 74 KHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGK---------SY 144 (424)
Q Consensus 74 ~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~~---------~~ 144 (424)
.++.. ..+++..+..++.|++.||.|||+++ ++||||||+||+++.++.+||+|||+++...... ..
T Consensus 97 ~~~~~---~~~~~~~~~~i~~qi~~~L~~LH~~~-i~H~dl~p~nill~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~ 172 (337)
T cd07852 97 AVIRA---NILEDVHKRYIMYQLLKALKYIHSGN-VIHRDLKPSNILLNSDCRVKLADFGLARSLSELEENPENPVLTDY 172 (337)
T ss_pred HHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCCHHHEEEcCCCcEEEeeccchhccccccccccCcchhcc
Confidence 98854 37889999999999999999999999 9999999999999999999999999987554321 23
Q ss_pred ccCccCCCcccccc-CCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhh-------------------hhHhhhcc
Q 014478 145 STNLAFTPPEYMRT-GRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKN-------------------FLLLMDSA 204 (424)
Q Consensus 145 ~gt~~y~aPE~~~~-~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~-------------------~~~~~~~~ 204 (424)
.+|..|+|||.+.+ ..++.++||||||+++|+|++|+.||+........... ........
T Consensus 173 ~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (337)
T cd07852 173 VATRWYRAPEILLGSTRYTKGVDMWSVGCILGEMLLGKPLFPGTSTLNQLEKIIEVIGPPSAEDIESIKSPFAATMLDSL 252 (337)
T ss_pred cccccccCceeeeccccccccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHHHhhhHHHhhhhc
Confidence 57889999998865 45788999999999999999999887643211100000 00000000
Q ss_pred ------cCCCCCchhHHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 014478 205 ------LEGHFSNDEGTELVRLASRCLQSEARERPNAKSLVIS 241 (424)
Q Consensus 205 ------~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~~~~~ 241 (424)
........++.++.++|.+||+.||++|||+.+++.+
T Consensus 253 ~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rps~~~il~~ 295 (337)
T cd07852 253 PSRPRKPLDELLPKASDDALDLLKKLLVFNPNKRLTAEEALEH 295 (337)
T ss_pred ccccccchhhhccCCCHHHHHHHHHhccCCcccccCHHHHhhC
Confidence 0001112257789999999999999999999999975
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul |
| >cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-35 Score=274.51 Aligned_cols=236 Identities=21% Similarity=0.216 Sum_probs=177.2
Q ss_pred CCCcccceeee--ecceecccccCCCc---hhhhHHHHHHHHHhcCCCcCcceeEEEEEeCC--------eeeEEEecCC
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESSD---LGETLNLEEAKAVGNLRSERLANLIGCCYEAD--------ERLLVAEFMP 68 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~~---~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~--------~~~lv~e~~~ 68 (424)
|++|.||.+.. .+..+++|.+.... .....+.+|++++++++||||++++++|.... ..++||||+.
T Consensus 23 g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~~lv~e~~~ 102 (310)
T cd07865 23 GTFGEVFKARHKKTKQIVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPYNRYKGSFYLVFEFCE 102 (310)
T ss_pred CCCEEEEEEEECCCCcEEEEEEEeccCCcCCchhHHHHHHHHHHhCCCCCccceEEEEecccccccCCCceEEEEEcCCC
Confidence 88999999987 45667777664322 22345678999999999999999999987654 3499999996
Q ss_pred CCCHHhHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCCC------
Q 014478 69 NETLAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGK------ 142 (424)
Q Consensus 69 ~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~~------ 142 (424)
+ +|.+++.. ....+++.++..++.|++.||.|||+++ ++|+||||+||+++.++.+||+|||++.......
T Consensus 103 ~-~l~~~l~~-~~~~~~~~~~~~i~~qi~~al~~lH~~~-i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~ 179 (310)
T cd07865 103 H-DLAGLLSN-KNVKFTLSEIKKVMKMLLNGLYYIHRNK-ILHRDMKAANILITKDGILKLADFGLARAFSLSKNSKPNR 179 (310)
T ss_pred c-CHHHHHHh-cccCCCHHHHHHHHHHHHHHHHHHHHCC-eeccCCCHHHEEECCCCcEEECcCCCcccccCCcccCCCC
Confidence 5 88888754 3346899999999999999999999999 9999999999999999999999999987654321
Q ss_pred --ccccCccCCCccccccCC-CCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhc----------------
Q 014478 143 --SYSTNLAFTPPEYMRTGR-VTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDS---------------- 203 (424)
Q Consensus 143 --~~~gt~~y~aPE~~~~~~-~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~---------------- 203 (424)
...++..|+|||.+.+.. ++.++||||||+++|+|++|..|+......... .....+...
T Consensus 180 ~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~el~t~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (310)
T cd07865 180 YTNRVVTLWYRPPELLLGERDYGPPIDMWGAGCIMAEMWTRSPIMQGNTEQHQL-TLISQLCGSITPEVWPGVDKLELFK 258 (310)
T ss_pred ccCcccCccccCcHHhcCCcccCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHH-HHHHHHhCCCChhhcccccchhhhh
Confidence 234678899999887643 688999999999999999999777543211000 000000000
Q ss_pred --ccCCC---------CCchhHHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 014478 204 --ALEGH---------FSNDEGTELVRLASRCLQSEARERPNAKSLVIS 241 (424)
Q Consensus 204 --~~~~~---------~~~~~~~~l~~li~~cl~~dp~~Rps~~~~~~~ 241 (424)
..... .+...+..+.++|.+||..||++|||+++++++
T Consensus 259 ~~~~~~~~~~~~~~~l~~~~~~~~~~dli~~~l~~~P~~R~t~~e~l~h 307 (310)
T cd07865 259 KMELPQGQKRKVKERLKPYVKDPHALDLIDKLLVLDPAKRIDADTALNH 307 (310)
T ss_pred hccCCCccchhhHHhcccccCCHHHHHHHHHHhcCChhhccCHHHHhcC
Confidence 00000 000124567899999999999999999999864
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl |
| >cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-35 Score=279.92 Aligned_cols=236 Identities=16% Similarity=0.205 Sum_probs=183.7
Q ss_pred CCCcccceeee--ecceecccccCCC---chhhhHHHHHHHHHhcCCCcCcceeEEEEEeC-----CeeeEEEecCCCCC
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESS---DLGETLNLEEAKAVGNLRSERLANLIGCCYEA-----DERLLVAEFMPNET 71 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~---~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~-----~~~~lv~e~~~~gs 71 (424)
|++|.||.+.. .+..+++|.+... ......+.+|+.+++.++|+||+++++++... ...++||||+. ++
T Consensus 16 G~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni~~~~~~~~~~~~~~~~~~~lv~e~~~-~~ 94 (337)
T cd07858 16 GAYGIVCSAKNSETNEKVAIKKIANAFDNRIDAKRTLREIKLLRHLDHENVIAIKDIMPPPHREAFNDVYIVYELMD-TD 94 (337)
T ss_pred CCCeEEEEEEecCCCCeEEEEEecccccccchhHHHHHHHHHHHhcCCCCccchHHheecccccccCcEEEEEeCCC-CC
Confidence 88999999886 4566777766432 23345677899999999999999999988654 24799999996 68
Q ss_pred HHhHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCC----CccccC
Q 014478 72 LAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG----KSYSTN 147 (424)
Q Consensus 72 L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~----~~~~gt 147 (424)
|.+++.. ...+++..+..++.|++.||.|||+++ ++||||||+||+++.++.+||+|||+++..... ....++
T Consensus 95 L~~~~~~--~~~l~~~~~~~i~~qi~~aL~~LH~~~-i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~ 171 (337)
T cd07858 95 LHQIIRS--SQTLSDDHCQYFLYQLLRGLKYIHSAN-VLHRDLKPSNLLLNANCDLKICDFGLARTTSEKGDFMTEYVVT 171 (337)
T ss_pred HHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHhCC-EecCCCCHHHEEEcCCCCEEECcCccccccCCCcccccccccc
Confidence 9998864 457999999999999999999999999 999999999999999999999999998865433 234578
Q ss_pred ccCCCcccccc-CCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHh-------------------hhhhhHhhhccc--
Q 014478 148 LAFTPPEYMRT-GRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIR-------------------SKNFLLLMDSAL-- 205 (424)
Q Consensus 148 ~~y~aPE~~~~-~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~-------------------~~~~~~~~~~~~-- 205 (424)
..|+|||.+.. ..++.++|||||||++|+|++|+.||......... ............
T Consensus 172 ~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (337)
T cd07858 172 RWYRAPELLLNCSEYTTAIDVWSVGCIFAELLGRKPLFPGKDYVHQLKLITELLGSPSEEDLGFIRNEKARRYIRSLPYT 251 (337)
T ss_pred cCccChHHHhcCCCCCCcccHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCChHHhhhcCchhhhHHHHhcCcc
Confidence 89999998875 45889999999999999999999887653110000 000000000000
Q ss_pred -C---CCCCchhHHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 014478 206 -E---GHFSNDEGTELVRLASRCLQSEARERPNAKSLVIS 241 (424)
Q Consensus 206 -~---~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~~~~~ 241 (424)
. ......+++++.++|.+||+.||++|||+++++.+
T Consensus 252 ~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rps~~ell~h 291 (337)
T cd07858 252 PRQSFARLFPHANPLAIDLLEKMLVFDPSKRITVEEALAH 291 (337)
T ss_pred cccCHHHHcccCCHHHHHHHHHHhcCChhhccCHHHHHcC
Confidence 0 01123467889999999999999999999999977
|
Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati |
| >cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-35 Score=272.64 Aligned_cols=238 Identities=17% Similarity=0.223 Sum_probs=184.5
Q ss_pred CCCcccceeee--ecceecccccCCCch--hhhHHHHHHHHHhcCC-CcCcceeEEEEEeCCeeeEEEecCCCCCHHhHh
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESSDL--GETLNLEEAKAVGNLR-SERLANLIGCCYEADERLLVAEFMPNETLAKHL 76 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~~~--~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~l 76 (424)
|++|.||.+.+ .+..+++|++..... ......+|+..+++++ ||||+++++++..++..++||||+ +|+|.+++
T Consensus 10 g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~~-~~~l~~~~ 88 (283)
T cd07830 10 GTFGSVYLARNKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNEHPNIVKLKEVFRENDELYFVFEYM-EGNLYQLM 88 (283)
T ss_pred CCceEEEEEEECCCCcEEEEEEehhhccchhHHHHHHHHHHHHhccCCCCchhHHHHhhcCCcEEEEEecC-CCCHHHHH
Confidence 88999999998 456677776654332 2334567999999998 999999999999999999999999 77999988
Q ss_pred ccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCC---CccccCccCCCc
Q 014478 77 FHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG---KSYSTNLAFTPP 153 (424)
Q Consensus 77 ~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~---~~~~gt~~y~aP 153 (424)
....+..+++.++..++.|++.+|.|||+++ ++|+||+|+||+++.++.++|+|||++...... ....++..|+||
T Consensus 89 ~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~~-i~H~dl~~~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~aP 167 (283)
T cd07830 89 KDRKGKPFSESVIRSIIYQILQGLAHIHKHG-FFHRDLKPENLLVSGPEVVKIADFGLAREIRSRPPYTDYVSTRWYRAP 167 (283)
T ss_pred HhcccccCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCChhhEEEcCCCCEEEeecccceeccCCCCcCCCCCcccccCc
Confidence 7544457899999999999999999999999 999999999999999999999999998866543 234578899999
Q ss_pred ccccc-CCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhh-----------------hhHhhhcccCC-------C
Q 014478 154 EYMRT-GRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKN-----------------FLLLMDSALEG-------H 208 (424)
Q Consensus 154 E~~~~-~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~~-------~ 208 (424)
|++.+ ..++.++|+||||+++++|++|+.||+........... ........... .
T Consensus 168 E~~~~~~~~~~~~Di~s~G~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (283)
T cd07830 168 EILLRSTSYSSPVDIWALGCIMAELYTLRPLFPGSSEIDQLYKICSVLGTPTKQDWPEGYKLASKLGFRFPQFAPTSLHQ 247 (283)
T ss_pred eeeecCcCcCCccchhhHHHHHHHHHhCCCccCCCChHHHHHHHHHhcCCCChhhhhhHhhhhccccccccccccccHHH
Confidence 98864 45789999999999999999999887653211100000 00000000000 0
Q ss_pred CCchhHHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 014478 209 FSNDEGTELVRLASRCLQSEARERPNAKSLVIS 241 (424)
Q Consensus 209 ~~~~~~~~l~~li~~cl~~dp~~Rps~~~~~~~ 241 (424)
.....+.++.+++.+||..||++|||+++++.+
T Consensus 248 ~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~ 280 (283)
T cd07830 248 LIPNASPEAIDLIKDMLRWDPKKRPTASQALQH 280 (283)
T ss_pred HcccCCHHHHHHHHHhcccCcccCCCHHHHhhC
Confidence 011225789999999999999999999999754
|
Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili |
| >cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.6e-35 Score=269.78 Aligned_cols=238 Identities=16% Similarity=0.162 Sum_probs=183.2
Q ss_pred CCCcccceeeee--cceecccccCCCch---hhhHHHHHHHHHhcC---CCcCcceeEEEEEeCCe-----eeEEEecCC
Q 014478 2 GGRCSKFSICWF--HCHLKSSVLESSDL---GETLNLEEAKAVGNL---RSERLANLIGCCYEADE-----RLLVAEFMP 68 (424)
Q Consensus 2 G~~g~v~~~~~~--~~~v~~~~~~~~~~---~~~~~~~E~~~l~~l---~h~~iv~~~~~~~~~~~-----~~lv~e~~~ 68 (424)
|++|.||.+.+. +..+++|++..... ....+.+|+.+++++ +||||+++++++...+. .+++|||+.
T Consensus 10 g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~~~~l~~e~~~ 89 (287)
T cd07838 10 GAYGTVYKARDLNTGRFVALKKVRVPLSEEGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDRELKLTLVFEHVD 89 (287)
T ss_pred cCceEEEEEEECCCCCEEEEEEeccccccchhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCCCceeEEEehhcc
Confidence 789999999984 57777777753321 234566788777666 59999999999988776 899999997
Q ss_pred CCCHHhHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCCC---ccc
Q 014478 69 NETLAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGK---SYS 145 (424)
Q Consensus 69 ~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~~---~~~ 145 (424)
+ +|.+++.......+++..++.++.|++.||.|||+++ ++|+||+|+||+++.++.++|+|||++....... ...
T Consensus 90 ~-~l~~~l~~~~~~~l~~~~~~~~~~~i~~al~~LH~~~-i~h~~l~~~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~ 167 (287)
T cd07838 90 Q-DLATYLSKCPKPGLPPETIKDLMRQLLRGVDFLHSHR-IVHRDLKPQNILVTSDGQVKIADFGLARIYSFEMALTSVV 167 (287)
T ss_pred c-CHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCC-eeeccCChhhEEEccCCCEEEeccCcceeccCCccccccc
Confidence 5 8999886544446899999999999999999999999 9999999999999999999999999987754332 334
Q ss_pred cCccCCCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHh------------------hhcccC-
Q 014478 146 TNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLL------------------MDSALE- 206 (424)
Q Consensus 146 gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~------------------~~~~~~- 206 (424)
++..|+|||.+.+..++.++|+|||||++|+|++|..||........-....... ......
T Consensus 168 ~~~~~~~PE~~~~~~~~~~~Di~s~G~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (287)
T cd07838 168 VTLWYRAPEVLLQSSYATPVDMWSVGCIFAELFRRRPLFRGTSEADQLDKIFDVIGLPSEEEWPRNVSLPRSSFPSYTPR 247 (287)
T ss_pred ccccccChHHhccCCCCCcchhhhHHHHHHHHHhCCCcccCCChHHHHHHHHHHcCCCChHhcCCCcccchhhccccccc
Confidence 6888999999998889999999999999999999987766532111100000000 000000
Q ss_pred --CCCCchhHHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 014478 207 --GHFSNDEGTELVRLASRCLQSEARERPNAKSLVIS 241 (424)
Q Consensus 207 --~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~~~~~ 241 (424)
.......++.+.+++.+||+.||++||++.+++.+
T Consensus 248 ~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~il~~ 284 (287)
T cd07838 248 SFKSFVPEICEEGLDLLKKMLTFNPHKRISAFEALQH 284 (287)
T ss_pred chhhhhhhhhHHHHHHHHHHhccCCccCCCHHHHhcC
Confidence 00112346788999999999999999999999854
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both |
| >PTZ00024 cyclin-dependent protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-35 Score=278.60 Aligned_cols=235 Identities=17% Similarity=0.175 Sum_probs=182.4
Q ss_pred CCCcccceeee--ecceecccccCCCchhh---------------hHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEE
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESSDLGE---------------TLNLEEAKAVGNLRSERLANLIGCCYEADERLLVA 64 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~~~~~---------------~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 64 (424)
|++|.||.+.+ .+..+++|++....... ..+.+|+++++.++||||+++++++..++..++||
T Consensus 20 G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 99 (335)
T PTZ00024 20 GTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHENIMGLVDVYVEGDFINLVM 99 (335)
T ss_pred CCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCcceeeeeEEEecCCcEEEEE
Confidence 89999999986 45667777664332211 24778999999999999999999999999999999
Q ss_pred ecCCCCCHHhHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCC----
Q 014478 65 EFMPNETLAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRD---- 140 (424)
Q Consensus 65 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~---- 140 (424)
||+. |+|.+++.. ...+++..+..++.|++.||.|||+++ ++||||+|+||+++.++.++|+|||+++....
T Consensus 100 e~~~-~~l~~~l~~--~~~~~~~~~~~~~~ql~~aL~~LH~~~-i~H~dl~~~nill~~~~~~kl~dfg~~~~~~~~~~~ 175 (335)
T PTZ00024 100 DIMA-SDLKKVVDR--KIRLTESQVKCILLQILNGLNVLHKWY-FMHRDLSPANIFINSKGICKIADFGLARRYGYPPYS 175 (335)
T ss_pred eccc-cCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCC-eecccccHHHeEECCCCCEEECCccceeeccccccc
Confidence 9997 599999864 456899999999999999999999999 99999999999999999999999999875441
Q ss_pred --------------CCccccCccCCCccccccCC-CCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhccc
Q 014478 141 --------------GKSYSTNLAFTPPEYMRTGR-VTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSAL 205 (424)
Q Consensus 141 --------------~~~~~gt~~y~aPE~~~~~~-~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (424)
.....++..|+|||.+.+.. ++.++|||||||++|+|++|..||.......... ..........
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~-~i~~~~~~~~ 254 (335)
T PTZ00024 176 DTLSKDETMQRREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGCIFAELLTGKPLFPGENEIDQLG-RIFELLGTPN 254 (335)
T ss_pred ccccccccccccccccccccccCCCCChhcccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHH-HHHHHhCCCc
Confidence 01224577899999987644 6889999999999999999998876542111000 0000000000
Q ss_pred C-----------------------CCCCchhHHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 014478 206 E-----------------------GHFSNDEGTELVRLASRCLQSEARERPNAKSLVIS 241 (424)
Q Consensus 206 ~-----------------------~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~~~~~ 241 (424)
. .......+.++.++|.+||+.||++|||+++++.+
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~~ 313 (335)
T PTZ00024 255 EDNWPQAKKLPLYTEFTPRKPKDLKTIFPNASDDAIDLLQSLLKLNPLERISAKEALKH 313 (335)
T ss_pred hhhCcchhhcccccccCcCCcccHHHhCcCCChHHHHHHHHHcCCCchhccCHHHHhcC
Confidence 0 00112346789999999999999999999999865
|
|
| >cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-35 Score=279.15 Aligned_cols=237 Identities=16% Similarity=0.196 Sum_probs=183.4
Q ss_pred CCCcccceeee--ecceecccccCCCc---hhhhHHHHHHHHHhcCCCcCcceeEEEEEe----CCeeeEEEecCCCCCH
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESSD---LGETLNLEEAKAVGNLRSERLANLIGCCYE----ADERLLVAEFMPNETL 72 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~~---~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~----~~~~~lv~e~~~~gsL 72 (424)
|++|.||.+.. .+..+++|++.... .....+.+|+.+|++++||||+++++++.. ....++||||+. |+|
T Consensus 16 g~~g~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~lv~e~~~-~~l 94 (334)
T cd07855 16 GAYGVVCSAIDTRSGKKVAIKKIPHAFDVPTLAKRTLRELKILRHFKHDNIIAIRDILRPPGADFKDVYVVMDLME-SDL 94 (334)
T ss_pred CCCeEEEEEEEcCCCCEEEEEEeccccccccchHHHHHHHHHHHhcCCCCccCHHHhccccCCCCceEEEEEehhh-hhH
Confidence 88999998886 56777777765432 234667889999999999999999998764 345789999995 599
Q ss_pred HhHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCC--------Ccc
Q 014478 73 AKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG--------KSY 144 (424)
Q Consensus 73 ~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~--------~~~ 144 (424)
.+++.. ...+++..+..++.||+.||.|||+++ ++||||||+||+++.++.+||+|||+++..... ...
T Consensus 95 ~~~~~~--~~~~~~~~~~~i~~qi~~aL~~LH~~~-ivH~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~ 171 (334)
T cd07855 95 HHIIHS--DQPLTEEHIRYFLYQLLRGLKYIHSAN-VIHRDLKPSNLLVNEDCELRIGDFGMARGLSSSPTEHKYFMTEY 171 (334)
T ss_pred HHHhcc--CCCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCCHHHEEEcCCCcEEecccccceeecccCcCCCcccccc
Confidence 998864 456999999999999999999999999 999999999999999999999999998754321 123
Q ss_pred ccCccCCCcccccc-CCCCCCcceehhHHHHHHHhhCCCCCCchhhHHH-------------------hhhhhhHhhhcc
Q 014478 145 STNLAFTPPEYMRT-GRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLI-------------------RSKNFLLLMDSA 204 (424)
Q Consensus 145 ~gt~~y~aPE~~~~-~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~-------------------~~~~~~~~~~~~ 204 (424)
.++..|+|||.+.+ ..++.++|||||||++|+|++|+.||........ ............
T Consensus 172 ~~~~~y~~PE~~~~~~~~~~~~Di~slG~~l~el~~g~~pf~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 251 (334)
T cd07855 172 VATRWYRAPELLLSLPEYTTAIDMWSVGCIFAEMLGRRQLFPGKNYVHQLKLILSVLGSPSEEVLNRIGSDRVRKYIQNL 251 (334)
T ss_pred cccccccChHHhcCCcccccccchHHHHHHHHHHHcCCCccCCCChHHHHHHHHHHhCCChhHhhhhhchhhHHHHHhhc
Confidence 57889999999875 4588999999999999999999988865321100 000000011100
Q ss_pred c-CCC-----CCchhHHHHHHHHHHhcccCcCCCCCHHHHHHHH
Q 014478 205 L-EGH-----FSNDEGTELVRLASRCLQSEARERPNAKSLVISL 242 (424)
Q Consensus 205 ~-~~~-----~~~~~~~~l~~li~~cl~~dp~~Rps~~~~~~~l 242 (424)
. ... .....+.++.++|.+||+.||++|||+++++.+.
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~~ 295 (334)
T cd07855 252 PRKQPVPWSKIFPKASPEALDLLSQMLQFDPEERITVEQALQHP 295 (334)
T ss_pred ccCCCCCHHHHcccCCHHHHHHHHHHccCChhhCcCHHHHHhCh
Confidence 0 000 1123578899999999999999999999998763
|
Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the |
| >cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-35 Score=279.07 Aligned_cols=236 Identities=18% Similarity=0.222 Sum_probs=187.0
Q ss_pred CCCcccceeeee--cceecccccCCCc---hhhhHHHHHHHHHhcCCCcCcceeEEEEEeCC-----eeeEEEecCCCCC
Q 014478 2 GGRCSKFSICWF--HCHLKSSVLESSD---LGETLNLEEAKAVGNLRSERLANLIGCCYEAD-----ERLLVAEFMPNET 71 (424)
Q Consensus 2 G~~g~v~~~~~~--~~~v~~~~~~~~~---~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-----~~~lv~e~~~~gs 71 (424)
|++|.||.+.+. +..+++|++.... ...+.+.+|+.+++.++||||+++++++.... ..++||||+++ +
T Consensus 11 g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~lv~e~~~~-~ 89 (330)
T cd07834 11 GAYGVVCSAVDKRTGRKVAIKKISNVFDDLIDAKRILREIKLLRHLRHENIIGLLDILRPPSPEDFNDVYIVTELMET-D 89 (330)
T ss_pred CCCeEEEEEEeCCCCcEEEEEeeccccccchhhhhHHHHHHHHHhcCCcchhhhhhhhcccCcccccceEEEecchhh-h
Confidence 889999999874 5667777665432 34567889999999999999999999998775 78999999974 8
Q ss_pred HHhHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCCC-------cc
Q 014478 72 LAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGK-------SY 144 (424)
Q Consensus 72 L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~~-------~~ 144 (424)
|.+++.. ..++++..+..++.|++.||.|||+++ ++||||||+||+++.++.++|+|||++....... ..
T Consensus 90 l~~~l~~--~~~l~~~~~~~i~~~l~~~l~~LH~~g-i~H~dlkp~nili~~~~~~~L~dfg~~~~~~~~~~~~~~~~~~ 166 (330)
T cd07834 90 LHKVIKS--PQPLTDDHIQYFLYQILRGLKYLHSAN-VIHRDLKPSNILVNSNCDLKICDFGLARGVDPDEDEKGFLTEY 166 (330)
T ss_pred HHHHHhC--CCCCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCCHHHEEEcCCCCEEEcccCceEeeccccccccccccc
Confidence 9998864 348999999999999999999999999 9999999999999999999999999988655432 33
Q ss_pred ccCccCCCccccccC-CCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhh-------------------hHhhhc-
Q 014478 145 STNLAFTPPEYMRTG-RVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNF-------------------LLLMDS- 203 (424)
Q Consensus 145 ~gt~~y~aPE~~~~~-~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~-------------------~~~~~~- 203 (424)
.++..|+|||.+.+. .++.++|+||||+++|+|++|..||+............ ......
T Consensus 167 ~~~~~y~aPE~~~~~~~~~~~sDi~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (330)
T cd07834 167 VVTRWYRAPELLLSSSRYTKAIDIWSVGCIFAELLTRKPLFPGRDYIDQLNLIVEVLGTPSEEDLKFITSEKARNYLKSL 246 (330)
T ss_pred ccccCcCCceeeecccCCCcchhHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHhcCCCChhHhhhccccchhhHHhhc
Confidence 568889999999887 78999999999999999999998886542211100000 000000
Q ss_pred --c---cCCCCCchhHHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 014478 204 --A---LEGHFSNDEGTELVRLASRCLQSEARERPNAKSLVIS 241 (424)
Q Consensus 204 --~---~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~~~~~ 241 (424)
. .........+.++.++|.+||+.+|.+|||+++++.+
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~ 289 (330)
T cd07834 247 PKKPKKPLSKLFPGASPEAIDLLEKMLVFDPKKRITADEALAH 289 (330)
T ss_pred ccCCcchhHHhcccCCHHHHHHHHHHccCChhhCCCHHHHHhC
Confidence 0 0000112356789999999999999999999999975
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and |
| >cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.9e-35 Score=274.18 Aligned_cols=236 Identities=18% Similarity=0.167 Sum_probs=181.0
Q ss_pred CCCcccceeee--ecceecccccCCCch---hhhHHHHHHHHHhcCCCcCcceeEEEEEeC--CeeeEEEecCCCCCHHh
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESSDL---GETLNLEEAKAVGNLRSERLANLIGCCYEA--DERLLVAEFMPNETLAK 74 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~~~---~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~--~~~~lv~e~~~~gsL~~ 74 (424)
|++|.||.+.+ .+..+++|++..... ....+.+|+.++++++|+||+++++++... +..++||||+.+ +|.+
T Consensus 18 g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~~~~-~l~~ 96 (309)
T cd07845 18 GTYGIVYRARDTTSGEIVALKKVRMDNERDGIPISSLREITLLLNLRHPNIVELKEVVVGKHLDSIFLVMEYCEQ-DLAS 96 (309)
T ss_pred cCCEEEEEEEECCCCcEEEEEEEEeccCCCCCcchhhHHHHHHHhCCCCCCcceEEEEecCCCCeEEEEEecCCC-CHHH
Confidence 78999999987 467777777643321 123567899999999999999999998765 457999999975 8988
Q ss_pred HhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCC----CccccCccC
Q 014478 75 HLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG----KSYSTNLAF 150 (424)
Q Consensus 75 ~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~----~~~~gt~~y 150 (424)
++.. ....+++.++..++.|++.||.|||+.+ ++||||||+||+++.++.+||+|||++...... ....++..|
T Consensus 97 ~l~~-~~~~l~~~~~~~~~~qi~~~l~~lH~~~-i~H~dl~p~nil~~~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~y 174 (309)
T cd07845 97 LLDN-MPTPFSESQVKCLMLQLLRGLQYLHENF-IIHRDLKVSNLLLTDKGCLKIADFGLARTYGLPAKPMTPKVVTLWY 174 (309)
T ss_pred HHHh-cccCCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCCHHHEEECCCCCEEECccceeeecCCccCCCCcccccccc
Confidence 8864 2467899999999999999999999999 999999999999999999999999998865532 122357789
Q ss_pred CCcccccc-CCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhh--------------c--cc-CCCC---
Q 014478 151 TPPEYMRT-GRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMD--------------S--AL-EGHF--- 209 (424)
Q Consensus 151 ~aPE~~~~-~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~--------------~--~~-~~~~--- 209 (424)
+|||.+.+ ..++.++|||||||++|+|++|..||........-.. ...... . .. ....
T Consensus 175 ~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~~f~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (309)
T cd07845 175 RAPELLLGCTTYTTAIDMWAVGCILAELLAHKPLLPGKSEIEQLDL-IIQLLGTPNESIWPGFSDLPLVGKFTLPKQPYN 253 (309)
T ss_pred cChhhhcCCCCcCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHH-HHHhcCCCChhhchhhhcccccccccccCCCCC
Confidence 99999875 4578999999999999999999988765321111000 000000 0 00 0000
Q ss_pred -----CchhHHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 014478 210 -----SNDEGTELVRLASRCLQSEARERPNAKSLVIS 241 (424)
Q Consensus 210 -----~~~~~~~l~~li~~cl~~dp~~Rps~~~~~~~ 241 (424)
....++++.++|.+||..||++|||+.+++.+
T Consensus 254 ~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~~il~h 290 (309)
T cd07845 254 NLKHKFPWLSEAGLRLLNFLLMYDPKKRATAEEALES 290 (309)
T ss_pred chHHhccccCHHHHHHHHHHhcCChhhCcCHHHHhcC
Confidence 01246788999999999999999999999865
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing |
| >KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.8e-36 Score=282.57 Aligned_cols=217 Identities=18% Similarity=0.233 Sum_probs=177.6
Q ss_pred ecceecccccCCCchhhhHHHHHHHHHhcC-CCcCcceeEEEEEeCCeeeEEEecCCCCCHHhHhccCCCCCCCHHHHHH
Q 014478 13 FHCHLKSSVLESSDLGETLNLEEAKAVGNL-RSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQPMKWAMRLR 91 (424)
Q Consensus 13 ~~~~v~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~ 91 (424)
.+...++|++... .....+|+.++... +||||+++.+++.++.+.|+|||.+.|+-|.+.+.. .+....++..
T Consensus 346 t~~~~~vkii~~~---~~~~~~e~~~~~~~~~h~niv~~~~v~~~~~~~~~v~e~l~g~ell~ri~~---~~~~~~e~~~ 419 (612)
T KOG0603|consen 346 TDQEPAVKIISKR---ADDNQDEIPISLLVRDHPNIVKSHDVYEDGKEIYLVMELLDGGELLRRIRS---KPEFCSEASQ 419 (612)
T ss_pred cccchhheecccc---ccccccccchhhhhcCCCcceeecceecCCceeeeeehhccccHHHHHHHh---cchhHHHHHH
Confidence 3444566666555 23344577666666 799999999999999999999999999988888753 2333377888
Q ss_pred HHHHHHHHHHHHHhCCCcccccCCCCCeee-cCCCCeEEccccccccCCCCC-ccccCccCCCccccccCCCCCCcceeh
Q 014478 92 VALYLAQALEYCSSKGRALYHDLNAYRILF-DKDGNPRLSSFGLMKNSRDGK-SYSTNLAFTPPEYMRTGRVTPESVVYS 169 (424)
Q Consensus 92 i~~qi~~~L~~lH~~~~ivH~dikp~Nill-~~~~~~kl~Dfg~~~~~~~~~-~~~gt~~y~aPE~~~~~~~~~~~Dv~s 169 (424)
|+.+|+.++.|||++| +|||||||+|||+ +..++++|+|||.++...... ..+-|..|.|||++....+++.||+||
T Consensus 420 w~~~lv~Av~~LH~~g-vvhRDLkp~NIL~~~~~g~lrltyFG~a~~~~~~~~tp~~t~~y~APEvl~~~~yt~acD~WS 498 (612)
T KOG0603|consen 420 WAAELVSAVDYLHEQG-VVHRDLKPGNILLDGSAGHLRLTYFGFWSELERSCDTPALTLQYVAPEVLAIQEYTEACDWWS 498 (612)
T ss_pred HHHHHHHHHHHHHhcC-eeecCCChhheeecCCCCcEEEEEechhhhCchhhcccchhhcccChhhhccCCCCcchhhHH
Confidence 9999999999999999 9999999999999 688999999999999877662 335688999999999889999999999
Q ss_pred hHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHHHHHHHHHhcccCcCCCCCHHHHHHHHH
Q 014478 170 FGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERPNAKSLVISLM 243 (424)
Q Consensus 170 lG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~~~~~l~ 243 (424)
||++||+|++|+.|+...... .++......+.+...+|.+.++|+.+||+.||.+||++.++..+-+
T Consensus 499 LGvlLy~ML~G~tp~~~~P~~-------~ei~~~i~~~~~s~~vS~~AKdLl~~LL~~dP~~Rl~~~~i~~h~w 565 (612)
T KOG0603|consen 499 LGVLLYEMLTGRTLFAAHPAG-------IEIHTRIQMPKFSECVSDEAKDLLQQLLQVDPALRLGADEIGAHPW 565 (612)
T ss_pred HHHHHHHHHhCCCccccCCch-------HHHHHhhcCCccccccCHHHHHHHHHhccCChhhCcChhhhccCcc
Confidence 999999999999998776433 2233333344455788999999999999999999999999986643
|
|
| >KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.1e-35 Score=293.53 Aligned_cols=242 Identities=18% Similarity=0.288 Sum_probs=201.1
Q ss_pred CCCcccceeeee---------cceecccccCCCc--hhhhHHHHHHHHHhcC-CCcCcceeEEEEEeCCeeeEEEecCCC
Q 014478 2 GGRCSKFSICWF---------HCHLKSSVLESSD--LGETLNLEEAKAVGNL-RSERLANLIGCCYEADERLLVAEFMPN 69 (424)
Q Consensus 2 G~~g~v~~~~~~---------~~~v~~~~~~~~~--~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~~~~ 69 (424)
|.||.|+++.-. ...|++|.+.... ...+.+..|+++|+.+ +|+||+.++|+|..++..++|+||+..
T Consensus 307 g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~~~~~~~~~El~~m~~~g~H~niv~llG~~t~~~~~~~v~Ey~~~ 386 (609)
T KOG0200|consen 307 GAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASSSEKKDLMSELNVLKELGKHPNIVNLLGACTQDGPLYVIVEYAEH 386 (609)
T ss_pred ccccceEeEEEeecccccccceEEEEEEecccccCcHHHHHHHHHHHHHHHhcCCcchhhheeeeccCCceEEEEEeccC
Confidence 789999988642 3456777765433 4478899999999999 799999999999998899999999999
Q ss_pred CCHHhHhccCC------C--------CCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEcccccc
Q 014478 70 ETLAKHLFHWE------T--------QPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLM 135 (424)
Q Consensus 70 gsL~~~l~~~~------~--------~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~ 135 (424)
|+|.+++++.. . ..++..+.+.++.||+.|++||+++. +|||||-.+|||+..+..+||+|||++
T Consensus 387 G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~~~~-~vHRDLAaRNVLi~~~~~~kIaDFGla 465 (609)
T KOG0200|consen 387 GDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLASVP-CVHRDLAARNVLITKNKVIKIADFGLA 465 (609)
T ss_pred CcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHhhCC-ccchhhhhhhEEecCCCEEEEccccce
Confidence 99999997532 0 23889999999999999999999999 999999999999999999999999999
Q ss_pred ccCCCCCcc-----cc--CccCCCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhcccCCC
Q 014478 136 KNSRDGKSY-----ST--NLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGH 208 (424)
Q Consensus 136 ~~~~~~~~~-----~g--t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (424)
+........ .+ ...|||||.+....++.+||||||||++|||+|...++.... .....+...+....+..
T Consensus 466 r~~~~~~~y~~~~~~~~LP~kWmApEsl~~~~ft~kSDVWSfGI~L~EifsLG~~PYp~~---~~~~~l~~~l~~G~r~~ 542 (609)
T KOG0200|consen 466 RDHYNKDYYRTKSSAGTLPVKWMAPESLFDRVFTSKSDVWSFGILLWEIFTLGGTPYPGI---PPTEELLEFLKEGNRME 542 (609)
T ss_pred eccCCCCceEecCCCCccceeecCHHHhccCcccccchhhHHHHHHHHHhhCCCCCCCCC---CcHHHHHHHHhcCCCCC
Confidence 965543222 12 356999999999899999999999999999999664444320 11223344666777888
Q ss_pred CCchhHHHHHHHHHHhcccCcCCCCCHHHHHHHHHHHhh
Q 014478 209 FSNDEGTELVRLASRCLQSEARERPNAKSLVISLMSLQK 247 (424)
Q Consensus 209 ~~~~~~~~l~~li~~cl~~dp~~Rps~~~~~~~l~~~~~ 247 (424)
.|..|++++.+++..||+.+|++||++.++.+.+.....
T Consensus 543 ~P~~c~~eiY~iM~~CW~~~p~~RP~F~~~~~~~~~~l~ 581 (609)
T KOG0200|consen 543 QPEHCSDEIYDLMKSCWNADPEDRPTFSECVEFFEKHLQ 581 (609)
T ss_pred CCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHHHHHHH
Confidence 899999999999999999999999999999999988543
|
|
| >KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-35 Score=268.48 Aligned_cols=242 Identities=17% Similarity=0.215 Sum_probs=187.5
Q ss_pred CCCcccceeeeecceecccccCCCchhhhHHHHHHHHHh--cCCCcCcceeEEEEEeCC----eeeEEEecCCCCCHHhH
Q 014478 2 GGRCSKFSICWFHCHLKSSVLESSDLGETLNLEEAKAVG--NLRSERLANLIGCCYEAD----ERLLVAEFMPNETLAKH 75 (424)
Q Consensus 2 G~~g~v~~~~~~~~~v~~~~~~~~~~~~~~~~~E~~~l~--~l~h~~iv~~~~~~~~~~----~~~lv~e~~~~gsL~~~ 75 (424)
|.||.||++...+..||||++...+ .+.|..|-++.. .++|+||++|++.-..+. +.+||+||.+.|+|.+|
T Consensus 221 Grfg~V~KaqL~~~~VAVKifp~~~--kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~~~~eywLVt~fh~kGsL~dy 298 (534)
T KOG3653|consen 221 GRFGCVWKAQLDNRLVAVKIFPEQE--KQSFQNEKNIYSLPGMKHENILQFIGAEKRGTADRMEYWLVTEFHPKGSLCDY 298 (534)
T ss_pred CccceeehhhccCceeEEEecCHHH--HHHHHhHHHHHhccCccchhHHHhhchhccCCccccceeEEeeeccCCcHHHH
Confidence 8999999999999999999986554 455666655544 558999999999987665 78999999999999999
Q ss_pred hccCCCCCCCHHHHHHHHHHHHHHHHHHHhCC--------CcccccCCCCCeeecCCCCeEEccccccccCCCCC-----
Q 014478 76 LFHWETQPMKWAMRLRVALYLAQALEYCSSKG--------RALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGK----- 142 (424)
Q Consensus 76 l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~--------~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~~----- 142 (424)
|+ ...++|....+++..+++||+|||+.. +|+|||||+.|||+..|+++.|+|||++.....+.
T Consensus 299 L~---~ntisw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~DlTccIaDFGLAl~~~p~~~~~d~ 375 (534)
T KOG3653|consen 299 LK---ANTISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKNDLTCCIADFGLALRLEPGKPQGDT 375 (534)
T ss_pred HH---hccccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEccCCcEEeeccceeEEecCCCCCcch
Confidence 95 567999999999999999999999741 39999999999999999999999999998766432
Q ss_pred -ccccCccCCCccccccCC-CC-----CCcceehhHHHHHHHhhCCCCC-------CchhhH-HHhh-----hhhhHhhh
Q 014478 143 -SYSTNLAFTPPEYMRTGR-VT-----PESVVYSFGTMLLDLLSGKHIP-------PSHALD-LIRS-----KNFLLLMD 202 (424)
Q Consensus 143 -~~~gt~~y~aPE~~~~~~-~~-----~~~Dv~slG~~l~el~~g~~~~-------~~~~~~-~~~~-----~~~~~~~~ 202 (424)
...||..|||||++.+.- +. .+.||||+|.|+|||+++.... +....+ .... ......+.
T Consensus 376 ~~qVGT~RYMAPEvLEgainl~d~~Afkr~DvYamgLVLWEi~SRC~~~~~~~vp~Yqlpfe~evG~hPt~e~mq~~VV~ 455 (534)
T KOG3653|consen 376 HGQVGTRRYMAPEVLEGAINLQDRDAFKRIDVYAMGLVLWEIASRCTDADPGPVPEYQLPFEAEVGNHPTLEEMQELVVR 455 (534)
T ss_pred hhhhhhhhhcCHHHHhhhcccccHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCcccCchhHHhcCCCCHHHHHHHHHh
Confidence 357999999999998532 22 2689999999999999865322 111101 0100 11111222
Q ss_pred cccCCCCCch-----hHHHHHHHHHHhcccCcCCCCCHHHHHHHHHHHhhh
Q 014478 203 SALEGHFSND-----EGTELVRLASRCLQSEARERPNAKSLVISLMSLQKE 248 (424)
Q Consensus 203 ~~~~~~~~~~-----~~~~l~~li~~cl~~dp~~Rps~~~~~~~l~~~~~~ 248 (424)
...++.++.. -..-+++.++.||+.||+.|.|+.-+.+.+..+...
T Consensus 456 kK~RP~~p~~W~~h~~~~~l~et~EeCWDhDaeARLTA~Cv~eR~~~l~~~ 506 (534)
T KOG3653|consen 456 KKQRPKIPDAWRKHAGMAVLCETIEECWDHDAEARLTAGCVEERMAELMML 506 (534)
T ss_pred hccCCCChhhhhcCccHHHHHHHHHHHcCCchhhhhhhHHHHHHHHHHhcc
Confidence 2333333332 245689999999999999999999999999888764
|
|
| >cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-35 Score=278.24 Aligned_cols=234 Identities=16% Similarity=0.195 Sum_probs=180.6
Q ss_pred CCCcccceeee--ecceecccccCCCc---hhhhHHHHHHHHHhcCCCcCcceeEEEEEeCC------eeeEEEecCCCC
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESSD---LGETLNLEEAKAVGNLRSERLANLIGCCYEAD------ERLLVAEFMPNE 70 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~~---~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~------~~~lv~e~~~~g 70 (424)
|++|.||.+.+ .+..+++|++.... .....+.+|+.+++.++||||+++++++.... ..++||||+.+
T Consensus 26 g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~~lv~e~~~~- 104 (342)
T cd07879 26 GAYGSVCSAIDKRTGEKVAIKKLSRPFQSEIFAKRAYRELTLLKHMQHENVIGLLDVFTSAVSGDEFQDFYLVMPYMQT- 104 (342)
T ss_pred cCCeEEEEEEeCCCCcEEEEEEecCccccccchhHHHHHHHHHHhcCCCCccchhheecccccCCCCceEEEEeccccc-
Confidence 88999999987 46778887765432 22456789999999999999999999987543 45899999964
Q ss_pred CHHhHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCC-CccccCcc
Q 014478 71 TLAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG-KSYSTNLA 149 (424)
Q Consensus 71 sL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~-~~~~gt~~ 149 (424)
+|..++ +..+++..+..++.|++.||.|||+++ ++||||||+||+++.++.+||+|||+++..... ....++..
T Consensus 105 ~l~~~~----~~~~~~~~~~~~~~qi~~aL~~LH~~~-i~H~dlkp~NIll~~~~~~kL~dfg~~~~~~~~~~~~~~~~~ 179 (342)
T cd07879 105 DLQKIM----GHPLSEDKVQYLVYQMLCGLKYIHSAG-IIHRDLKPGNLAVNEDCELKILDFGLARHADAEMTGYVVTRW 179 (342)
T ss_pred CHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCCHHHEEECCCCCEEEeeCCCCcCCCCCCCCceeeec
Confidence 887766 346899999999999999999999999 999999999999999999999999998865433 23467889
Q ss_pred CCCcccccc-CCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhh-------------------hHhhhc---ccC
Q 014478 150 FTPPEYMRT-GRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNF-------------------LLLMDS---ALE 206 (424)
Q Consensus 150 y~aPE~~~~-~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~-------------------~~~~~~---~~~ 206 (424)
|+|||.+.+ ..++.++|||||||++|||++|+.||........-.... ...... ...
T Consensus 180 y~aPE~~~~~~~~~~~~Dv~slGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (342)
T cd07879 180 YRAPEVILNWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGPEFVQKLEDKAAKSYIKSLPKYPR 259 (342)
T ss_pred ccChhhhcCccccCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhcccchHHHHhhcCCccc
Confidence 999999876 458889999999999999999998887542110000000 000000 000
Q ss_pred CC---CCchhHHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 014478 207 GH---FSNDEGTELVRLASRCLQSEARERPNAKSLVIS 241 (424)
Q Consensus 207 ~~---~~~~~~~~l~~li~~cl~~dp~~Rps~~~~~~~ 241 (424)
.. ..+..+.++.++|.+||+.||++||++++++.+
T Consensus 260 ~~~~~~~~~~~~~~~~li~~~l~~dP~~R~~~~e~l~h 297 (342)
T cd07879 260 KDFSTLFPKASPQAVDLLEKMLELDVDKRLTATEALEH 297 (342)
T ss_pred chHHHHhcCCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 00 011345678999999999999999999999865
|
Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13 |
| >KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.9e-35 Score=285.02 Aligned_cols=235 Identities=13% Similarity=0.168 Sum_probs=195.8
Q ss_pred CCCcccceee--eecceecccccCCCchhhhHHHHHHHHHhcC-CCcCcceeEEEEEe-----CCeeeEEEecCCCCCHH
Q 014478 2 GGRCSKFSIC--WFHCHLKSSVLESSDLGETLNLEEAKAVGNL-RSERLANLIGCCYE-----ADERLLVAEFMPNETLA 73 (424)
Q Consensus 2 G~~g~v~~~~--~~~~~v~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~-----~~~~~lv~e~~~~gsL~ 73 (424)
|..|.||++. ..+.-.++|++.......+....|.++|+.+ .|||++.++|+|.. ++.+|||||||.|||..
T Consensus 30 Gtygkv~k~k~~~~~~~aa~kI~~~~~d~deEiE~eynil~~~~~hpnv~~fyg~~~k~~~~~~DqLWLVMEfC~gGSVT 109 (953)
T KOG0587|consen 30 GTYGKVYKGRHVKTGQLAAIKIMDPTEDEEEEIELEYNMLKKYSHHPNVATFYGAFIKKDPGNGDQLWLVMEFCGGGSVT 109 (953)
T ss_pred ccceeEEEEeeeecCceeeeEeecCCccccHHHHHHHHHHHhccCCCCcceEEEEEEEecCCCCCeEEEEeeccCCccHH
Confidence 6667777665 4667778888888887888889999999999 69999999999864 46799999999999999
Q ss_pred hHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCC----CCccccCcc
Q 014478 74 KHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRD----GKSYSTNLA 149 (424)
Q Consensus 74 ~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~----~~~~~gt~~ 149 (424)
|+++...+..+.|+.+..|++.++.||.+||.+. ++|||||-.|||++.++.|||+|||++..... ..+..||+.
T Consensus 110 DLVKn~~g~rl~E~~IaYI~re~lrgl~HLH~nk-viHRDikG~NiLLT~e~~VKLvDFGvSaQldsT~grRnT~iGtP~ 188 (953)
T KOG0587|consen 110 DLVKNTKGNRLKEEWIAYILREILRGLAHLHNNK-VIHRDIKGQNVLLTENAEVKLVDFGVSAQLDSTVGRRNTFIGTPY 188 (953)
T ss_pred HHHhhhcccchhhHHHHHHHHHHHHHHHHHhhcc-eeeecccCceEEEeccCcEEEeeeeeeeeeecccccccCcCCCcc
Confidence 9998777889999999999999999999999998 99999999999999999999999999876653 346789999
Q ss_pred CCCccccccC-----CCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhh-cccCCCCCchhHHHHHHHHHH
Q 014478 150 FTPPEYMRTG-----RVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMD-SALEGHFSNDEGTELVRLASR 223 (424)
Q Consensus 150 y~aPE~~~~~-----~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~li~~ 223 (424)
|||||++... .|+.++|+||||++..||-.|.+|+-.. .....+..+.. +.+....|..++.++.++|..
T Consensus 189 WMAPEViac~e~~d~tyd~R~D~WsLGITaIEladG~PPl~Dm----HPmraLF~IpRNPPPkLkrp~kWs~~FndFIs~ 264 (953)
T KOG0587|consen 189 WMAPEVIACDESPDATYDYRSDLWSLGITAIEMAEGAPPLCDM----HPMRALFLIPRNPPPKLKRPKKWSKKFNDFIST 264 (953)
T ss_pred cccceeeecccCCCCCcccccchhhccceeehhcCCCCCccCc----chhhhhccCCCCCCccccchhhHHHHHHHHHHH
Confidence 9999999743 4788999999999999999998665432 22222222221 222223366789999999999
Q ss_pred hcccCcCCCCCHHHHHHH
Q 014478 224 CLQSEARERPNAKSLVIS 241 (424)
Q Consensus 224 cl~~dp~~Rps~~~~~~~ 241 (424)
||.+|..+||++.+++.+
T Consensus 265 cL~Kd~e~RP~~~~ll~h 282 (953)
T KOG0587|consen 265 CLVKDYEQRPSTEELLKH 282 (953)
T ss_pred HHhhccccCcchhhhccC
Confidence 999999999999998865
|
|
| >cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12 | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.9e-35 Score=271.16 Aligned_cols=236 Identities=20% Similarity=0.179 Sum_probs=180.6
Q ss_pred CCCcccceeee--ecceecccccCCCc---hhhhHHHHHHHHHhcCCCcCcceeEEEEEeCC----------eeeEEEec
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESSD---LGETLNLEEAKAVGNLRSERLANLIGCCYEAD----------ERLLVAEF 66 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~~---~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~----------~~~lv~e~ 66 (424)
|++|.||.+.+ .+..+++|++.... .....+.+|+++++.++||||+++++++.... ..++||||
T Consensus 18 g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~e~~~~~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~~~lv~e~ 97 (302)
T cd07864 18 GTYGQVYKARDKDTGELVALKKVRLDNEKEGFPITAIREIKILRQLNHRNIVNLKEIVTDKQDALDFKKDKGAFYLVFEY 97 (302)
T ss_pred cCCEEEEEEEECCCCcEEEEEEEeecccccCchHHHHHHHHHHHhCCCCCeeeeeheecCcchhhhccccCCcEEEEEcc
Confidence 78999999998 45667777765332 22356778999999999999999999987654 68999999
Q ss_pred CCCCCHHhHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCCC----
Q 014478 67 MPNETLAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGK---- 142 (424)
Q Consensus 67 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~~---- 142 (424)
+++ +|...+.. ....+++.+++.++.|++.||.|||+.+ ++||||||+||+++.++.+||+|||++.......
T Consensus 98 ~~~-~l~~~l~~-~~~~~~~~~~~~i~~qi~~aL~~LH~~~-i~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~~~~~~ 174 (302)
T cd07864 98 MDH-DLMGLLES-GLVHFSEDHIKSFMKQLLEGLNYCHKKN-FLHRDIKCSNILLNNKGQIKLADFGLARLYNSEESRPY 174 (302)
T ss_pred cCc-cHHHHHhc-CCCCCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCCHHHEEECCCCcEEeCcccccccccCCccccc
Confidence 986 77777754 2457899999999999999999999999 9999999999999999999999999988654322
Q ss_pred -ccccCccCCCccccccC-CCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhccc---------------
Q 014478 143 -SYSTNLAFTPPEYMRTG-RVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSAL--------------- 205 (424)
Q Consensus 143 -~~~gt~~y~aPE~~~~~-~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~--------------- 205 (424)
...++..|+|||++.+. .++.++|||||||++|+|++|+.||....... ....+........
T Consensus 175 ~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~~~el~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (302)
T cd07864 175 TNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFTKKPIFQANQELA-QLELISRLCGSPCPAVWPDVIKLPYFNT 253 (302)
T ss_pred ccceeccCccChHHhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHH-HHHHHHHHhCCCChhhcccccccccccc
Confidence 22457789999988754 46889999999999999999997776431110 0000000000000
Q ss_pred ----------CCCCCchhHHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 014478 206 ----------EGHFSNDEGTELVRLASRCLQSEARERPNAKSLVIS 241 (424)
Q Consensus 206 ----------~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~~~~~ 241 (424)
.......++..+.+++.+||..||++|||+.+++.+
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~ 299 (302)
T cd07864 254 MKPKKQYRRRLREEFSFIPTPALDLLDHMLTLDPSKRCTAEEALNS 299 (302)
T ss_pred cccccccccchhhhcCCCCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 000112357789999999999999999999999754
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely |
| >cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-34 Score=273.74 Aligned_cols=235 Identities=19% Similarity=0.250 Sum_probs=181.4
Q ss_pred CCCcccceeee--ecceecccccCCC---chhhhHHHHHHHHHhcCCCcCcceeEEEEEe-CCeeeEEEecCCCCCHHhH
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESS---DLGETLNLEEAKAVGNLRSERLANLIGCCYE-ADERLLVAEFMPNETLAKH 75 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~---~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-~~~~~lv~e~~~~gsL~~~ 75 (424)
|++|.||.+.. .+..+++|++... ....+.+.+|+++++.++||||++++++|.. +...++||||+ +++|.++
T Consensus 21 g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~lv~e~~-~~~L~~~ 99 (328)
T cd07856 21 GAFGLVCSARDQLTGQNVAIKKIMKPFSTPVLAKRTYRELKLLKHLRHENIISLSDIFISPLEDIYFVTELL-GTDLHRL 99 (328)
T ss_pred cCCeEEEEEEECCCCCEEEEEEecccccccchhHHHHHHHHHHHhcCCCCeeeEeeeEecCCCcEEEEeehh-ccCHHHH
Confidence 78999999876 4566777765432 2234677889999999999999999999876 45688999998 5699988
Q ss_pred hccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCC-CccccCccCCCcc
Q 014478 76 LFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG-KSYSTNLAFTPPE 154 (424)
Q Consensus 76 l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~-~~~~gt~~y~aPE 154 (424)
+. ..++++..+..++.|++.||.|||+++ ++||||+|+||+++.++.++|+|||++...... ....++..|+|||
T Consensus 100 ~~---~~~~~~~~~~~~~~ql~~aL~~LH~~~-iiH~dl~p~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~y~aPE 175 (328)
T cd07856 100 LT---SRPLEKQFIQYFLYQILRGLKYVHSAG-VVHRDLKPSNILINENCDLKICDFGLARIQDPQMTGYVSTRYYRAPE 175 (328)
T ss_pred Hh---cCCCCHHHHHHHHHHHHHHHHHHHhCC-cccCCCCHHHEeECCCCCEEeCccccccccCCCcCCCcccccccCce
Confidence 84 356888999999999999999999999 999999999999999999999999998765433 3345788999999
Q ss_pred cccc-CCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHh-------------------hhhhhHhhhcc-cCCCC----
Q 014478 155 YMRT-GRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIR-------------------SKNFLLLMDSA-LEGHF---- 209 (424)
Q Consensus 155 ~~~~-~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~-------------------~~~~~~~~~~~-~~~~~---- 209 (424)
.+.+ ..++.++|||||||++|+|++|+.||+........ ........... .....
T Consensus 176 ~~~~~~~~~~~~Dv~slG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (328)
T cd07856 176 IMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHVNQFSIITDLLGTPPDDVINTICSENTLRFVQSLPKREPVPFSE 255 (328)
T ss_pred eeeccCCcCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhccchhhHHHHhhccccCCCcHHH
Confidence 9876 46899999999999999999999887653211000 00000000000 00011
Q ss_pred -CchhHHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 014478 210 -SNDEGTELVRLASRCLQSEARERPNAKSLVIS 241 (424)
Q Consensus 210 -~~~~~~~l~~li~~cl~~dp~~Rps~~~~~~~ 241 (424)
...+++++.++|.+||+.+|++|||+.+++.+
T Consensus 256 ~~~~~~~~~~~li~~~l~~~P~~R~t~~ell~~ 288 (328)
T cd07856 256 KFKNADPSAIDLLEKMLVFDPQKRISAAEALAH 288 (328)
T ss_pred HcCCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 12356789999999999999999999999754
|
Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U |
| >KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-36 Score=258.79 Aligned_cols=236 Identities=16% Similarity=0.225 Sum_probs=184.1
Q ss_pred CCCcccceeee--ecceecccccCCCc--hhhhHHHHHHHHHhcC-CCcCcceeEEEEEeCCeeeEEEecCCCCCHHhHh
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESSD--LGETLNLEEAKAVGNL-RSERLANLIGCCYEADERLLVAEFMPNETLAKHL 76 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~~--~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~l 76 (424)
|+||+|.+-.. .+..+++|.+.... ...++++.|.+...+- +.||||+|||.+...+..||.||+|+- ||..+-
T Consensus 75 G~fG~V~KM~hk~sg~~mAVKrIr~~n~~keq~rll~e~d~~mks~~cp~IVkfyGa~F~EGdcWiCMELMd~-SlDklY 153 (361)
T KOG1006|consen 75 GAFGTVNKMLHKPSGKLMAVKRIRSNNIEKEQKRLLMEHDTVMKSSNCPNIVKFYGALFSEGDCWICMELMDI-SLDKLY 153 (361)
T ss_pred CcchhhhhhhcCccCcEEEEEEeeeccchHHHHHHHHHHHHHHhhcCCcHHHHHhhhhhcCCceeeeHHHHhh-hHHHHH
Confidence 88999998887 56667888775443 4567888888866655 799999999999988889999999965 776543
Q ss_pred ---ccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCC---CccccCccC
Q 014478 77 ---FHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG---KSYSTNLAF 150 (424)
Q Consensus 77 ---~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~---~~~~gt~~y 150 (424)
.......+++..+-.|..-.+.||.||...-.||||||||+|||++..|.+||||||++-....+ +...|-..|
T Consensus 154 k~vy~vq~~~ipE~Ilg~ItvatV~AL~yLK~~lkiIHRDvKPSNILldr~G~vKLCDFGIcGqLv~SiAkT~daGCrpY 233 (361)
T KOG1006|consen 154 KRVYSVQKSRIPENILGHITVATVDALDYLKEELKIIHRDVKPSNILLDRHGDVKLCDFGICGQLVDSIAKTVDAGCRPY 233 (361)
T ss_pred HHHHHHHhccCcHhhhhheeeeehhHHHHHHHHhhhhhccCChhheEEecCCCEeeecccchHhHHHHHHhhhccCCccc
Confidence 23345678888888888899999999998756999999999999999999999999998766544 345678899
Q ss_pred CCcccccc--CCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhcccC-CCCC---chhHHHHHHHHHHh
Q 014478 151 TPPEYMRT--GRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALE-GHFS---NDEGTELVRLASRC 224 (424)
Q Consensus 151 ~aPE~~~~--~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~---~~~~~~l~~li~~c 224 (424)
||||.+.. ..|+.+|||||||++|||+.||..|...+.. .++. +..++....+ -..+ ...+..+..+|..|
T Consensus 234 mAPERi~p~~~gyDiRSDvWSLGITL~EvAtG~fPyr~w~s-vfeq--l~~Vv~gdpp~l~~~~~~~~~s~~~~~fintC 310 (361)
T KOG1006|consen 234 MAPERIDPSDKGYDIRSDVWSLGITLYEVATGNFPYRKWDS-VFEQ--LCQVVIGDPPILLFDKECVHYSFSMVRFINTC 310 (361)
T ss_pred cChhccCCccCCcchhhhhhhhcceEeeeecCCCCcchHHH-HHHH--HHHHHcCCCCeecCcccccccCHHHHHHHHHH
Confidence 99999873 3499999999999999999999977665422 1221 2222211111 1112 23678899999999
Q ss_pred cccCcCCCCCHHHHHHH
Q 014478 225 LQSEARERPNAKSLVIS 241 (424)
Q Consensus 225 l~~dp~~Rps~~~~~~~ 241 (424)
|.+|-..||...++.++
T Consensus 311 l~Kd~~~Rpky~~Lk~~ 327 (361)
T KOG1006|consen 311 LIKDRSDRPKYDDLKKF 327 (361)
T ss_pred hhcccccCcchhhhhcC
Confidence 99999999999999864
|
|
| >cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-34 Score=274.11 Aligned_cols=235 Identities=16% Similarity=0.183 Sum_probs=182.3
Q ss_pred CCCcccceeee--ecceecccccCCC---chhhhHHHHHHHHHhcCCCcCcceeEEEEEeCC------eeeEEEecCCCC
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESS---DLGETLNLEEAKAVGNLRSERLANLIGCCYEAD------ERLLVAEFMPNE 70 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~---~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~------~~~lv~e~~~~g 70 (424)
|++|.||.+.+ .+..+++|++... ......+.+|+++++.++||||+++++++..+. ..++||||+ ++
T Consensus 26 G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~lv~e~~-~~ 104 (343)
T cd07880 26 GAYGTVCSALDRRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMKHENVIGLLDVFTPDLSLDRFHDFYLVMPFM-GT 104 (343)
T ss_pred cCCeEEEEEEECCCCcEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCccceeeeecCCccccccceEEEEEecC-CC
Confidence 88999999987 4666777766432 223456889999999999999999999987654 358999999 77
Q ss_pred CHHhHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCC-CccccCcc
Q 014478 71 TLAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG-KSYSTNLA 149 (424)
Q Consensus 71 sL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~-~~~~gt~~ 149 (424)
+|.+++. ...+++..+..++.|++.||.|||+.+ ++||||||+||+++.++.++|+|||++...... ....++..
T Consensus 105 ~l~~~~~---~~~l~~~~~~~i~~qi~~al~~LH~~g-i~H~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~ 180 (343)
T cd07880 105 DLGKLMK---HEKLSEDRIQFLVYQMLKGLKYIHAAG-IIHRDLKPGNLAVNEDCELKILDFGLARQTDSEMTGYVVTRW 180 (343)
T ss_pred CHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCCHHHEEEcCCCCEEEeecccccccccCccccccCCc
Confidence 9998884 357899999999999999999999999 999999999999999999999999998865543 23467889
Q ss_pred CCCcccccc-CCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhh-------------------hhhHhhhccc----
Q 014478 150 FTPPEYMRT-GRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSK-------------------NFLLLMDSAL---- 205 (424)
Q Consensus 150 y~aPE~~~~-~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~-------------------~~~~~~~~~~---- 205 (424)
|+|||.+.+ ..++.++|+||||+++|++++|..||........... ..........
T Consensus 181 y~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (343)
T cd07880 181 YRAPEVILNWMHYTQTVDIWSVGCIMAEMLTGKPLFKGHDHLDQLMEIMKVTGTPSKEFVQKLQSEDAKNYVKKLPRFRK 260 (343)
T ss_pred ccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHhhcchhHHHHHHhccccCc
Confidence 999999876 3578899999999999999999988764311100000 0000000000
Q ss_pred --CCCCCchhHHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 014478 206 --EGHFSNDEGTELVRLASRCLQSEARERPNAKSLVIS 241 (424)
Q Consensus 206 --~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~~~~~ 241 (424)
.......+++++.++|.+||..||++|||+.+++.+
T Consensus 261 ~~~~~~~~~~~~~~~~li~~~l~~dP~~R~t~~~~l~~ 298 (343)
T cd07880 261 KDFRSLLPNANPLAVNVLEKMLVLDAESRITAAEALAH 298 (343)
T ss_pred chHHHhccCCChHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 001123456789999999999999999999999854
|
Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12 |
| >cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-34 Score=267.25 Aligned_cols=237 Identities=19% Similarity=0.215 Sum_probs=185.2
Q ss_pred CCCcccceeeee--cceecccccCCC---chhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHhHh
Q 014478 2 GGRCSKFSICWF--HCHLKSSVLESS---DLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHL 76 (424)
Q Consensus 2 G~~g~v~~~~~~--~~~v~~~~~~~~---~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~l 76 (424)
|++|.||.+... +..+++|++... ....+.+..|+.++++++|+||+++++++......++||||++ ++|.+++
T Consensus 10 g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~~~-~~l~~~i 88 (282)
T cd07829 10 GTYGVVYKARDKKTGEIVALKKIRLDNEEEGIPSTALREISLLKELKHPNIVKLLDVIHTERKLYLVFEYCD-MDLKKYL 88 (282)
T ss_pred cCcceEEEeeecCCCcEEEEEEeccccccccccHHHHHHHHHHHhcCCCCHHHHHhhhhcCCceEEEecCcC-cCHHHHH
Confidence 788999998883 567777776553 2234677889999999999999999999999999999999997 4999999
Q ss_pred ccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCCC----ccccCccCCC
Q 014478 77 FHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGK----SYSTNLAFTP 152 (424)
Q Consensus 77 ~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~~----~~~gt~~y~a 152 (424)
... ...+++..+..++.|++.||.|||+++ ++||||+|+||+++.++.++|+|||+++...... ...++..|+|
T Consensus 89 ~~~-~~~~~~~~~~~~~~~i~~~l~~LH~~~-i~H~~l~~~ni~~~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~a 166 (282)
T cd07829 89 DKR-PGPLSPNLIKSIMYQLLRGLAYCHSHR-ILHRDLKPQNILINRDGVLKLADFGLARAFGIPLRTYTHEVVTLWYRA 166 (282)
T ss_pred Hhh-ccCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCChheEEEcCCCCEEEecCCcccccCCCccccCccccCcCcCC
Confidence 652 257999999999999999999999999 9999999999999999999999999987654332 2345678999
Q ss_pred ccccccC-CCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhh-----------hHh-----hhcccCC-------C
Q 014478 153 PEYMRTG-RVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNF-----------LLL-----MDSALEG-------H 208 (424)
Q Consensus 153 PE~~~~~-~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~-----------~~~-----~~~~~~~-------~ 208 (424)
||.+.+. .++.++|||||||++|||++|..||............. ... ....... .
T Consensus 167 PE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (282)
T cd07829 167 PEILLGSKHYSTAVDIWSVGCIFAEMITGKPLFPGDSEIDQLFKIFQILGTPTEESWPGVTKLPDYKPTFPKFPPKDLEK 246 (282)
T ss_pred hHHhcCCcCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHHHhCCCcHHHHHhhcccccccccccccCccchHH
Confidence 9998866 78999999999999999999987776542111100000 000 0000000 0
Q ss_pred CCchhHHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 014478 209 FSNDEGTELVRLASRCLQSEARERPNAKSLVIS 241 (424)
Q Consensus 209 ~~~~~~~~l~~li~~cl~~dp~~Rps~~~~~~~ 241 (424)
..+..+..+.+++.+||..||++||++.+++.+
T Consensus 247 ~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~~ 279 (282)
T cd07829 247 VLPRLDPEGIDLLSKMLQYNPAKRISAKEALKH 279 (282)
T ss_pred hcccccHHHHHHHHHhhccCcccCCCHHHHhhC
Confidence 111236789999999999999999999999854
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the |
| >cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-34 Score=272.85 Aligned_cols=235 Identities=16% Similarity=0.199 Sum_probs=181.0
Q ss_pred CCCcccceeee--ecceecccccCCCc---hhhhHHHHHHHHHhcCCCcCcceeEEEEEeC------CeeeEEEecCCCC
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESSD---LGETLNLEEAKAVGNLRSERLANLIGCCYEA------DERLLVAEFMPNE 70 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~~---~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~------~~~~lv~e~~~~g 70 (424)
|++|.||.+.. .+..+++|++.... ...+.+.+|+.++++++||||+++++++... ...+++++++ ++
T Consensus 28 G~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~lv~~~~-~~ 106 (345)
T cd07877 28 GAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GA 106 (345)
T ss_pred cCCeEEEEEEEcCCCeEEEEEEecCcchhhHHHHHHHHHHHHHHHcCCCcccceeeeeeecccccccccEEEEehhc-cc
Confidence 88999999875 56677777775432 2345678899999999999999999988653 2367888887 78
Q ss_pred CHHhHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCC-CccccCcc
Q 014478 71 TLAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG-KSYSTNLA 149 (424)
Q Consensus 71 sL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~-~~~~gt~~ 149 (424)
+|.+++. ...+++..+..++.|++.||.|||+.+ ++||||||+||+++.++.+||+|||+++..... ....++..
T Consensus 107 ~L~~~~~---~~~l~~~~~~~i~~qi~~aL~~LH~~~-ivH~dlkp~NIll~~~~~~kl~dfg~~~~~~~~~~~~~~~~~ 182 (345)
T cd07877 107 DLNNIVK---CQKLTDDHVQFLIYQILRGLKYIHSAD-IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRW 182 (345)
T ss_pred CHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCC-eeecCCChHHEEEcCCCCEEEecccccccccccccccccCCC
Confidence 9998884 346899999999999999999999999 999999999999999999999999998865443 23467889
Q ss_pred CCCcccccc-CCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhh----------------------hhHhhhcccC
Q 014478 150 FTPPEYMRT-GRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKN----------------------FLLLMDSALE 206 (424)
Q Consensus 150 y~aPE~~~~-~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~----------------------~~~~~~~~~~ 206 (424)
|+|||.+.+ ..++.++|||||||++|+|++|+.||+.......-... ..........
T Consensus 183 y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (345)
T cd07877 183 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPK 262 (345)
T ss_pred ccCHHHHhCccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHhhcccHhHHHHHHHhcccCC
Confidence 999999875 46788999999999999999999887643211100000 0000000000
Q ss_pred C---CCCchhHHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 014478 207 G---HFSNDEGTELVRLASRCLQSEARERPNAKSLVIS 241 (424)
Q Consensus 207 ~---~~~~~~~~~l~~li~~cl~~dp~~Rps~~~~~~~ 241 (424)
. ......++++.++|.+||..||.+||++.+++.+
T Consensus 263 ~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h 300 (345)
T cd07877 263 MNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH 300 (345)
T ss_pred cchhhhcCCCCHHHHHHHHHHcCCChhhcCCHHHHhcC
Confidence 0 0011246789999999999999999999999866
|
Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14 |
| >cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-34 Score=271.12 Aligned_cols=236 Identities=17% Similarity=0.178 Sum_probs=179.5
Q ss_pred CCCcccceeeee----cceecccccCCC---chhhhHHHHHHHHHhcC-CCcCcceeEEEEEeC----CeeeEEEecCCC
Q 014478 2 GGRCSKFSICWF----HCHLKSSVLESS---DLGETLNLEEAKAVGNL-RSERLANLIGCCYEA----DERLLVAEFMPN 69 (424)
Q Consensus 2 G~~g~v~~~~~~----~~~v~~~~~~~~---~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~----~~~~lv~e~~~~ 69 (424)
|++|.||.+.+. +..+++|++... ....+.+.+|+.+++++ .||||+++++.+... ...+++|||+.
T Consensus 11 G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~~~~~e~~~- 89 (332)
T cd07857 11 GAYGIVCSARNAETSEEETVAIKKITNVFSKKILAKRALRELKLLRHFRGHKNITCLYDMDIVFPGNFNELYLYEELME- 89 (332)
T ss_pred cCCeEEEEEEeCCCCcCceEEEEEeccccccchhHHHHHHHHHHHHHhcCCCChheeeeeeeeccccCCcEEEEEeccc-
Confidence 889999999985 446777766532 22345788899999999 599999999976533 34689999986
Q ss_pred CCHHhHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCC--------
Q 014478 70 ETLAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG-------- 141 (424)
Q Consensus 70 gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~-------- 141 (424)
++|.+++.. ...+++..+..++.||+.||.|||+++ ++||||||+||+++.++.+||+|||+++.....
T Consensus 90 ~~L~~~l~~--~~~~~~~~~~~~~~qi~~aL~~LH~~g-ivH~dlkp~Nili~~~~~~kl~Dfg~a~~~~~~~~~~~~~~ 166 (332)
T cd07857 90 ADLHQIIRS--GQPLTDAHFQSFIYQILCGLKYIHSAN-VLHRDLKPGNLLVNADCELKICDFGLARGFSENPGENAGFM 166 (332)
T ss_pred CCHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHhCC-cccCCCCHHHeEEcCCCCEEeCcCCCceecccccccccccc
Confidence 599998864 567899999999999999999999999 999999999999999999999999998754421
Q ss_pred CccccCccCCCcccccc-CCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhh-------------------hh---hh
Q 014478 142 KSYSTNLAFTPPEYMRT-GRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRS-------------------KN---FL 198 (424)
Q Consensus 142 ~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~-------------------~~---~~ 198 (424)
....||..|+|||.+.+ ..++.++|+||||+++|+|++|..||........-. .. ..
T Consensus 167 ~~~~g~~~y~aPE~~~~~~~~~~~~Di~slGv~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (332)
T cd07857 167 TEYVATRWYRAPEIMLSFQSYTKAIDVWSVGCILAELLGRKPVFKGKDYVDQLNQILQVLGTPDEETLSRIGSPKAQNYI 246 (332)
T ss_pred cCcccCccccCcHHHhCCCCCCcHHHHHHHHHHHHHHHhCCcCCCCCCHHHHHHHHHHHhCCCCHHHHHhhhhhhHHHHH
Confidence 22357889999998765 458899999999999999999998776431110000 00 00
Q ss_pred HhhhcccC---CCCCchhHHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 014478 199 LLMDSALE---GHFSNDEGTELVRLASRCLQSEARERPNAKSLVIS 241 (424)
Q Consensus 199 ~~~~~~~~---~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~~~~~ 241 (424)
........ .......+..+.+++.+||+.||++|||+.+++.+
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~ll~~ 292 (332)
T cd07857 247 RSLPNIPKKPFESIFPNANPLALDLLEKLLAFDPTKRISVEEALEH 292 (332)
T ss_pred HhccccCCcchHhhCCCCCHHHHHHHHHHccCCcccCCCHHHHhcC
Confidence 00000000 01112246789999999999999999999999865
|
Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co |
| >KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.9e-35 Score=254.47 Aligned_cols=236 Identities=18% Similarity=0.172 Sum_probs=185.7
Q ss_pred CCCcccceeee--ecceecccccCCCc-hhhhHHHHHHHHHhcC-CCcCcceeEEEEEeCCeeeEEEecCCCCCHHhHhc
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESSD-LGETLNLEEAKAVGNL-RSERLANLIGCCYEADERLLVAEFMPNETLAKHLF 77 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~~-~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~ 77 (424)
|+++.|-..+. .+..+++|++.+.. +.+.+.++|++++.+. .|+||++++++|+++...|||||-|.||+|..+|.
T Consensus 89 GAyasVqtcv~i~t~~EYAVKiidKq~gHsR~RvfREVe~f~~Cqgh~nilqLiefFEdd~~FYLVfEKm~GGplLshI~ 168 (463)
T KOG0607|consen 89 GAYASVQTCVSIQTGKEYAVKIIDKQPGHSRSRVFREVETFYQCQGHKNILQLIEFFEDDTRFYLVFEKMRGGPLLSHIQ 168 (463)
T ss_pred ccceeeeeeeeeccchhhhhhhhhcCCchHHHHHHHHHHHHHHhcCCccHHHHHHHhcccceEEEEEecccCchHHHHHH
Confidence 45555544443 67778888886654 5688999999999999 59999999999999999999999999999999997
Q ss_pred cCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCC---CeEEccccccccCCC-----------CCc
Q 014478 78 HWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDG---NPRLSSFGLMKNSRD-----------GKS 143 (424)
Q Consensus 78 ~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~---~~kl~Dfg~~~~~~~-----------~~~ 143 (424)
. ...|++.++.++.++|+.||.|||.+| |.|||+||+|||-.+.. -+|||||.+...... -.+
T Consensus 169 ~--~~~F~E~EAs~vvkdia~aLdFlH~kg-IAHRDlKPENiLC~~pn~vsPvKiCDfDLgSg~k~~~~~spastP~L~t 245 (463)
T KOG0607|consen 169 K--RKHFNEREASRVVKDIASALDFLHTKG-IAHRDLKPENILCESPNKVSPVKICDFDLGSGIKLNNDCSPASTPELLT 245 (463)
T ss_pred H--hhhccHHHHHHHHHHHHHHHHHHhhcC-cccccCCccceeecCCCCcCceeeeccccccccccCCCCCCCCCccccC
Confidence 5 668999999999999999999999999 99999999999996554 379999988643221 123
Q ss_pred cccCccCCCccccc-----cCCCCCCcceehhHHHHHHHhhCCCCCCchhhH--HHhh--------hhhhHhhhcccCCC
Q 014478 144 YSTNLAFTPPEYMR-----TGRVTPESVVYSFGTMLLDLLSGKHIPPSHALD--LIRS--------KNFLLLMDSALEGH 208 (424)
Q Consensus 144 ~~gt~~y~aPE~~~-----~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~--~~~~--------~~~~~~~~~~~~~~ 208 (424)
.+|+..|||||+.. ...|+.++|.||||+++|-|++|.+||.++... -|.. +.+.+.+....- .
T Consensus 246 PvGSAEfMAPEVVd~fv~qA~~YDKrCDlwSLGvIlYImLsGYpPFvG~Cg~dCGWdrGe~Cr~CQ~~LFesIQEGkY-e 324 (463)
T KOG0607|consen 246 PVGSAEFMAPEVVDVFVDQATFYDKRCDLWSLGVILYIMLSGYPPFVGHCGADCGWDRGEVCRVCQNKLFESIQEGKY-E 324 (463)
T ss_pred cccchhhcchhHHhhhccccccccccccHHHHHHHHHHHHhCCCCccCccCCcCCccCCCccHHHHHHHHHHHhccCC-c
Confidence 46778899999764 235899999999999999999999999864211 0111 112222222211 2
Q ss_pred CC----chhHHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 014478 209 FS----NDEGTELVRLASRCLQSEARERPNAKSLVIS 241 (424)
Q Consensus 209 ~~----~~~~~~l~~li~~cl~~dp~~Rps~~~~~~~ 241 (424)
+| ..++.+..++|..+|..|+.+|-++..++.+
T Consensus 325 FPdkdWahIS~eakdlisnLlvrda~~rlsa~~vlnh 361 (463)
T KOG0607|consen 325 FPDKDWAHISSEAKDLISNLLVRDAKQRLSAAQVLNH 361 (463)
T ss_pred CChhhhHHhhHHHHHHHHHHHhccHHhhhhhhhccCC
Confidence 33 2578899999999999999999999998764
|
|
| >KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-35 Score=283.19 Aligned_cols=240 Identities=19% Similarity=0.257 Sum_probs=202.5
Q ss_pred CCCCcccceeee--ecce----ecccccCCCc--hhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCH
Q 014478 1 MGGRCSKFSICW--FHCH----LKSSVLESSD--LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETL 72 (424)
Q Consensus 1 ~G~~g~v~~~~~--~~~~----v~~~~~~~~~--~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL 72 (424)
+|+||+||++.| .+.. |++|++.... .....+++|+-+|.+|.|||+++++|+|.... +.||++|+++|+|
T Consensus 706 sgAfGtV~kGiw~Pege~vKipVaiKvl~~~t~~~~s~e~LdeAl~masldHpnl~RLLgvc~~s~-~qlvtq~mP~G~L 784 (1177)
T KOG1025|consen 706 SGAFGTVYKGIWIPEGENVKIPVAIKVLIEFTSPKASIELLDEALRMASLDHPNLLRLLGVCMLST-LQLVTQLMPLGCL 784 (1177)
T ss_pred cccceeEEeeeEecCCceecceeEEEEeeccCCchhhHHHHHHHHHHhcCCCchHHHHhhhcccch-HHHHHHhcccchH
Confidence 699999999999 4444 4445554333 44678999999999999999999999998765 7899999999999
Q ss_pred HhHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCCCcc------cc
Q 014478 73 AKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSY------ST 146 (424)
Q Consensus 73 ~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~~~~------~g 146 (424)
.++++. .+.++.....+.|+.||++||.|||++. +|||||-.+|+|+..-..+|+.|||+++........ ..
T Consensus 785 lDyvr~-hr~~igsq~lLnw~~QIAkgM~YLe~qr-lVHrdLaaRNVLVksP~hvkitdfgla~ll~~d~~ey~~~~gK~ 862 (1177)
T KOG1025|consen 785 LDYVRE-HRDNIGSQDLLNWCYQIAKGMKYLEEQR-LVHRDLAARNVLVKSPNHVKITDFGLAKLLAPDEKEYSAPGGKV 862 (1177)
T ss_pred HHHHHH-hhccccHHHHHHHHHHHHHHHHHHHhcc-hhhhhhhhhheeecCCCeEEEEecchhhccCccccccccccccc
Confidence 999976 4678899999999999999999999999 999999999999999999999999999987654321 23
Q ss_pred CccCCCccccccCCCCCCcceehhHHHHHHHhh-CCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHHHHHHHHHhc
Q 014478 147 NLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCL 225 (424)
Q Consensus 147 t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl 225 (424)
.+.|||-|.+....++.++|||||||++||++| |..|.... ....+..++....+...|+.++-++..++.+||
T Consensus 863 pikwmale~i~~~~~thqSDVWsfGVtiWElmTFGa~Py~gi-----~~~eI~dlle~geRLsqPpiCtiDVy~~mvkCw 937 (1177)
T KOG1025|consen 863 PIKWMALESIRIRKYTHQSDVWSFGVTIWELMTFGAKPYDGI-----PAEEIPDLLEKGERLSQPPICTIDVYMVMVKCW 937 (1177)
T ss_pred CcHHHHHHHhhccCCCchhhhhhhhhhHHHHHhcCCCccCCC-----CHHHhhHHHhccccCCCCCCccHHHHHHHHHHh
Confidence 578999999999999999999999999999988 44555543 334444555555566778889999999999999
Q ss_pred ccCcCCCCCHHHHHHHHHHHhhh
Q 014478 226 QSEARERPNAKSLVISLMSLQKE 248 (424)
Q Consensus 226 ~~dp~~Rps~~~~~~~l~~~~~~ 248 (424)
..|+..||+++++...+.++.+.
T Consensus 938 mid~~~rp~fkel~~~fs~~ard 960 (1177)
T KOG1025|consen 938 MIDADSRPTFKELAEEFSRMARD 960 (1177)
T ss_pred ccCcccCccHHHHHHHHHHHhcC
Confidence 99999999999999999887654
|
|
| >cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-34 Score=275.13 Aligned_cols=235 Identities=17% Similarity=0.207 Sum_probs=182.5
Q ss_pred CCCcccceeee--ecceecccccCCC---chhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCe------eeEEEecCCCC
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESS---DLGETLNLEEAKAVGNLRSERLANLIGCCYEADE------RLLVAEFMPNE 70 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~---~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~------~~lv~e~~~~g 70 (424)
|++|.||.+.+ .+..+++|++... ......+.+|+.+++.++||||+++++++..... .++|+||+ ++
T Consensus 26 g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~lv~e~~-~~ 104 (343)
T cd07851 26 GAYGQVCSAFDTKTGRKVAIKKLSRPFQSAIHAKRTYRELRLLKHMDHENVIGLLDVFTPASSLEDFQDVYLVTHLM-GA 104 (343)
T ss_pred CCceEEEEEEECCCCcEEEEEecccccchhhHHHHHHHHHHHHHhccCCCHHHHHHHhhccccccccccEEEEEecC-CC
Confidence 78999999988 4566777776542 2234567789999999999999999998876554 89999999 66
Q ss_pred CHHhHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCC-CccccCcc
Q 014478 71 TLAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG-KSYSTNLA 149 (424)
Q Consensus 71 sL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~-~~~~gt~~ 149 (424)
+|.+++. ..++++..+..++.|++.||.|||+.+ ++||||||+||+++.++.++|+|||++...... ....++..
T Consensus 105 ~L~~~~~---~~~l~~~~~~~~~~ql~~aL~~LH~~g-i~H~dlkp~Nill~~~~~~kL~dfg~~~~~~~~~~~~~~~~~ 180 (343)
T cd07851 105 DLNNIVK---CQKLSDDHIQFLVYQILRGLKYIHSAG-IIHRDLKPSNIAVNEDCELKILDFGLARHTDDEMTGYVATRW 180 (343)
T ss_pred CHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCCHHHeEECCCCCEEEccccccccccccccCCccccc
Confidence 9999985 357999999999999999999999999 999999999999999999999999998865433 34467889
Q ss_pred CCCccccccC-CCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhh-------------------HhhhcccC---
Q 014478 150 FTPPEYMRTG-RVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFL-------------------LLMDSALE--- 206 (424)
Q Consensus 150 y~aPE~~~~~-~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~-------------------~~~~~~~~--- 206 (424)
|+|||.+.+. .++.++|||||||++|+|++|+.||+.......-..... ........
T Consensus 181 y~aPE~~~~~~~~~~~~DvwslGv~l~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (343)
T cd07851 181 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGKTLFPGSDHIDQLKRIMNLVGTPDEELLQKISSESARNYIQSLPQMPK 260 (343)
T ss_pred ccCHHHHhCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHHHhhccchhHHHHHHhccccCC
Confidence 9999998653 578899999999999999999988865321110000000 00000000
Q ss_pred C---CCCchhHHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 014478 207 G---HFSNDEGTELVRLASRCLQSEARERPNAKSLVIS 241 (424)
Q Consensus 207 ~---~~~~~~~~~l~~li~~cl~~dp~~Rps~~~~~~~ 241 (424)
. ......++++.++|.+||..||++|||+.+++.+
T Consensus 261 ~~~~~~~~~~s~~l~dli~~~l~~~P~~Rpt~~ell~h 298 (343)
T cd07851 261 KDFKEVFSGANPLAIDLLEKMLVLDPDKRITAAEALAH 298 (343)
T ss_pred CCHHHHhccCCHHHHHHHHHhCCCChhhCCCHHHHhcC
Confidence 0 0011246789999999999999999999999865
|
Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK |
| >cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-34 Score=273.84 Aligned_cols=235 Identities=16% Similarity=0.191 Sum_probs=177.2
Q ss_pred CCCcccceeee--ecceecccccCCCc-hhhhHHHHHHHHHhcCCCcCcceeEEEEEeC--------------CeeeEEE
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESSD-LGETLNLEEAKAVGNLRSERLANLIGCCYEA--------------DERLLVA 64 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~--------------~~~~lv~ 64 (424)
|++|.||.+.. .+..+++|++.... ...+.+.+|+++++.++||||+++++++... ...++||
T Consensus 16 g~~g~vy~~~~~~~~~~v~iK~i~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~ 95 (342)
T cd07854 16 GSNGLVFSAVDSDCDKRVAVKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVYEVLGPSGSDLTEDVGSLTELNSVYIVQ 95 (342)
T ss_pred CCCEEEEEEEECCCCcEEEEEEEecCCCchHHHHHHHHHHHHhcCCCcchhhHhhhcccccccccccccccccceEEEEe
Confidence 88999999987 45667776664433 3456788999999999999999999876543 3578999
Q ss_pred ecCCCCCHHhHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecC-CCCeEEccccccccCCCC--
Q 014478 65 EFMPNETLAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDK-DGNPRLSSFGLMKNSRDG-- 141 (424)
Q Consensus 65 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~-~~~~kl~Dfg~~~~~~~~-- 141 (424)
||++ ++|.+++. ...+++..+..++.||+.||.|||+.+ ++||||||+||+++. ++.++|+|||+++.....
T Consensus 96 e~~~-~~L~~~~~---~~~l~~~~~~~~~~qi~~aL~~LH~~g-ivH~dikp~Nili~~~~~~~kl~dfg~~~~~~~~~~ 170 (342)
T cd07854 96 EYME-TDLANVLE---QGPLSEEHARLFMYQLLRGLKYIHSAN-VLHRDLKPANVFINTEDLVLKIGDFGLARIVDPHYS 170 (342)
T ss_pred eccc-ccHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHhCC-cccCCCCHHHEEEcCCCceEEECCcccceecCCccc
Confidence 9997 49998884 346899999999999999999999999 999999999999974 557899999998754321
Q ss_pred -----CccccCccCCCcccccc-CCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhh--------------hhh---
Q 014478 142 -----KSYSTNLAFTPPEYMRT-GRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSK--------------NFL--- 198 (424)
Q Consensus 142 -----~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~--------------~~~--- 198 (424)
....++..|+|||++.. ..++.++|||||||++|+|++|+.||........... ...
T Consensus 171 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (342)
T cd07854 171 HKGYLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKPLFAGAHELEQMQLILESVPVVREEDRNELLNVI 250 (342)
T ss_pred cccccccccccccccCHHHHhCccccCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChHHhhhhhhhh
Confidence 12346788999998764 4578899999999999999999988864311000000 000
Q ss_pred -Hhhh-cccCCC-----CCchhHHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 014478 199 -LLMD-SALEGH-----FSNDEGTELVRLASRCLQSEARERPNAKSLVIS 241 (424)
Q Consensus 199 -~~~~-~~~~~~-----~~~~~~~~l~~li~~cl~~dp~~Rps~~~~~~~ 241 (424)
.... ...... .....+.++.+++.+||+.||.+|||+.+++.+
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~h 300 (342)
T cd07854 251 PSFVRNDGGEPRRPLRDLLPGVNPEALDFLEQILTFNPMDRLTAEEALMH 300 (342)
T ss_pred hhhhhhcccccCCCHHHHccCCCHHHHHHHHHHhCCCchhccCHHHHhCC
Confidence 0000 000000 112356789999999999999999999999854
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi |
| >cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-34 Score=268.67 Aligned_cols=236 Identities=17% Similarity=0.184 Sum_probs=176.8
Q ss_pred CCCcccceeee--ecceecccccCCCc---hhhhHHHHHHHHHhcCCCcCcceeEEEEEeCC--------eeeEEEecCC
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESSD---LGETLNLEEAKAVGNLRSERLANLIGCCYEAD--------ERLLVAEFMP 68 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~~---~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~--------~~~lv~e~~~ 68 (424)
|++|.||.+.+ .+..+++|++.... .....+.+|+++++.++||||+++++++.... ..++||||+.
T Consensus 19 g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~lv~~~~~ 98 (311)
T cd07866 19 GTFGEVYKARQIKTGRVVALKKILMHNEKDGFPITALREIKILKKLKHPNVVPLIDMAVERPDKSKRKRGSVYMVTPYMD 98 (311)
T ss_pred CCCEEEEEEEECCCCcEEEEEEEEeccCCCCcchhHHHHHHHHHhcCCCCccchhhheecccccccccCceEEEEEecCC
Confidence 88999999988 45667777664322 12346778999999999999999999875433 4689999997
Q ss_pred CCCHHhHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCCC------
Q 014478 69 NETLAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGK------ 142 (424)
Q Consensus 69 ~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~~------ 142 (424)
+ +|...+.. ....+++.++..++.|+++||.|||+++ ++||||||+||+++.++.++|+|||+++......
T Consensus 99 ~-~l~~~~~~-~~~~~~~~~~~~i~~~l~~al~~lH~~~-i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~ 175 (311)
T cd07866 99 H-DLSGLLEN-PSVKLTESQIKCYMLQLLEGINYLHENH-ILHRDIKAANILIDNQGILKIADFGLARPYDGPPPNPKGG 175 (311)
T ss_pred c-CHHHHHhc-cccCCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCCHHHEEECCCCCEEECcCccchhccCCCcccccC
Confidence 5 77777754 3457999999999999999999999999 9999999999999999999999999987543221
Q ss_pred ---------ccccCccCCCccccccC-CCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhh-----------
Q 014478 143 ---------SYSTNLAFTPPEYMRTG-RVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLM----------- 201 (424)
Q Consensus 143 ---------~~~gt~~y~aPE~~~~~-~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~----------- 201 (424)
...++..|+|||.+.+. .++.++|||||||++|+|++|+.||.......... ......
T Consensus 176 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~~g~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 254 (311)
T cd07866 176 GGGGTRKYTNLVVTRWYRPPELLLGERRYTTAVDIWGIGCVFAEMFTRRPILQGKSDIDQLH-LIFKLCGTPTEETWPGW 254 (311)
T ss_pred CcccccccccceeccCcCChHHhhCCCccCchhHhHHHHHHHHHHHhCCCCCCCCCHHHHHH-HHHHHhCCCChhhchhh
Confidence 12357789999988754 47899999999999999999998776432111000 000000
Q ss_pred ---hc----ccCCCCC-------chhHHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 014478 202 ---DS----ALEGHFS-------NDEGTELVRLASRCLQSEARERPNAKSLVIS 241 (424)
Q Consensus 202 ---~~----~~~~~~~-------~~~~~~l~~li~~cl~~dp~~Rps~~~~~~~ 241 (424)
.. ......+ ...++.+.+++.+||..||.+|||+.+++.+
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~t~~ell~~ 308 (311)
T cd07866 255 RSLPGCEGVHSFTNYPRTLEERFGKLGPEGLDLLSKLLSLDPYKRLTASDALEH 308 (311)
T ss_pred hhcccccccccCCCCCccHHHHcccCChhHHHHHHHHcccCcccCcCHHHHhcC
Confidence 00 0000011 1234678999999999999999999999754
|
Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic |
| >KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.7e-35 Score=289.69 Aligned_cols=233 Identities=18% Similarity=0.195 Sum_probs=191.4
Q ss_pred CCCcccceeee--ecceecccccCCC----chhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHhH
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESS----DLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKH 75 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~----~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~ 75 (424)
|+||.|..+.. .+..+|.|++.+- ......|..|-.+|.--+.+-|++++-.|.+++++|+||||++||+|-.+
T Consensus 86 GaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~ns~Wiv~LhyAFQD~~~LYlVMdY~pGGDlltL 165 (1317)
T KOG0612|consen 86 GAFGEVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFGNSEWIVQLHYAFQDERYLYLVMDYMPGGDLLTL 165 (1317)
T ss_pred cccceeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCCcHHHHHHHHHhcCccceEEEEecccCchHHHH
Confidence 89999998887 4455666666542 22356788899999888999999999999999999999999999999999
Q ss_pred hccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCC-CC----CccccCccC
Q 014478 76 LFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSR-DG----KSYSTNLAF 150 (424)
Q Consensus 76 l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~-~~----~~~~gt~~y 150 (424)
+.+.. ++++.++.-++..|+-||.-+|+.| +|||||||+|||||.+|++||+|||.|-... ++ ...+|||.|
T Consensus 166 lSk~~--~~pE~~ArFY~aEiVlAldslH~mg-yVHRDiKPDNvLld~~GHikLADFGsClkm~~dG~V~s~~aVGTPDY 242 (1317)
T KOG0612|consen 166 LSKFD--RLPEDWARFYTAEIVLALDSLHSMG-YVHRDIKPDNVLLDKSGHIKLADFGSCLKMDADGTVRSSVAVGTPDY 242 (1317)
T ss_pred HhhcC--CChHHHHHHHHHHHHHHHHHHHhcc-ceeccCCcceeEecccCcEeeccchhHHhcCCCCcEEeccccCCCCc
Confidence 97632 7999999999999999999999999 9999999999999999999999999887665 33 345799999
Q ss_pred CCccccc----c-CCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhcccCCCCC--chhHHHHHHHHHH
Q 014478 151 TPPEYMR----T-GRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFS--NDEGTELVRLASR 223 (424)
Q Consensus 151 ~aPE~~~----~-~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~~li~~ 223 (424)
.+||++. + +.|+..+|.||+||++|||+.|..||+.++. ... .-.++...-...+| ..+|++..+||.+
T Consensus 243 ISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMlyG~TPFYadsl--veT--Y~KIm~hk~~l~FP~~~~VSeeakdLI~~ 318 (1317)
T KOG0612|consen 243 ISPEVLQSQGDGKGEYGRECDWWSLGVFMYEMLYGETPFYADSL--VET--YGKIMNHKESLSFPDETDVSEEAKDLIEA 318 (1317)
T ss_pred cCHHHHHhhcCCccccCCccchhhhHHHHHHHHcCCCcchHHHH--HHH--HHHHhchhhhcCCCcccccCHHHHHHHHH
Confidence 9999986 2 5689999999999999999999999987632 222 22223322222344 5689999999999
Q ss_pred hcccCcCCCCC---HHHHHHHH
Q 014478 224 CLQSEARERPN---AKSLVISL 242 (424)
Q Consensus 224 cl~~dp~~Rps---~~~~~~~l 242 (424)
.+. +|+.|-. ++++..|.
T Consensus 319 ll~-~~e~RLgrngiedik~Hp 339 (1317)
T KOG0612|consen 319 LLC-DREVRLGRNGIEDIKNHP 339 (1317)
T ss_pred Hhc-ChhhhcccccHHHHHhCc
Confidence 887 6788876 99988774
|
|
| >KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-34 Score=288.62 Aligned_cols=230 Identities=18% Similarity=0.211 Sum_probs=175.9
Q ss_pred CCCcccceeee--ecceecccccCCC--chhhhHHHHHHHHHhcCCCcCcceeEEEEEeC--------------------
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESS--DLGETLNLEEAKAVGNLRSERLANLIGCCYEA-------------------- 57 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~--~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~-------------------- 57 (424)
||||.||++.. .|+.+|+|++.-. ......+.+|++.|.+|+|||||+++..+.+.
T Consensus 490 GGFG~VvkVRNKlDGr~YAIKKIpl~~s~~~~skI~rEVk~LArLnHpNVVRYysAWVEs~~~~~~~ei~~~~~~~~sQs 569 (1351)
T KOG1035|consen 490 GGFGSVVKVRNKLDGREYAIKKIPLKASDKLYSKILREVKLLARLNHPNVVRYYSAWVESTAELTVLEIVASDSESRSQS 569 (1351)
T ss_pred CCCceEEEEeecccchhhhhhhccCchHHHHHHHHHHHHHHHhhcCCcceeeeehhhhccCCccccccccccchhhhccc
Confidence 99999999986 7888999888654 44456788999999999999999887532110
Q ss_pred --------------------------------------------------------------------------------
Q 014478 58 -------------------------------------------------------------------------------- 57 (424)
Q Consensus 58 -------------------------------------------------------------------------------- 57 (424)
T Consensus 570 ~s~~~~~~~~~q~t~~p~~~~~~~~~~~~dd~sss~~~~~~~~~~~~d~e~~d~dedg~~~S~tS~~e~~~~~d~~~ess 649 (1351)
T KOG1035|consen 570 ASKYNGVDIRYQPTSSPSLTLSELDSEDEDDKSSSYTTRKASYESSTDEENDDSDEDGRNLSNTSDSEGSVILDDTSESS 649 (1351)
T ss_pred CCCcccceeeeccCCCcccCcchhhccccCccccccccccccccccCCcccccccccccccccccccCCccccCcchhhh
Confidence
Q ss_pred -------------------CeeeEEEecCCCCCHHhHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCC
Q 014478 58 -------------------DERLLVAEFMPNETLAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYR 118 (424)
Q Consensus 58 -------------------~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~N 118 (424)
..+||-||||+..+|.+++.++ ...-.....++++++|++||.|+|++| ||||||||.|
T Consensus 650 ~s~~~~~n~~e~~~~~q~~~~LYIQMEyCE~~ll~~iI~~N-~~~~~~d~~wrLFreIlEGLaYIH~~g-iIHRDLKP~N 727 (1351)
T KOG1035|consen 650 ESIPKTENSSEPMVPVQKPLILYIQMEYCEKTLLRDIIRRN-HFNSQRDEAWRLFREILEGLAYIHDQG-IIHRDLKPRN 727 (1351)
T ss_pred hhccccCCccccccccccceEEEEEHhhhhhhHHHHHHHhc-ccchhhHHHHHHHHHHHHHHHHHHhCc-eeeccCCcce
Confidence 0147889999997777777542 111146788999999999999999999 9999999999
Q ss_pred eeecCCCCeEEccccccccCC----------------------CCCccccCccCCCccccccCC---CCCCcceehhHHH
Q 014478 119 ILFDKDGNPRLSSFGLMKNSR----------------------DGKSYSTNLAFTPPEYMRTGR---VTPESVVYSFGTM 173 (424)
Q Consensus 119 ill~~~~~~kl~Dfg~~~~~~----------------------~~~~~~gt~~y~aPE~~~~~~---~~~~~Dv~slG~~ 173 (424)
|+++.++.|||+|||++.... +.+...||..|+|||.+.+.. |+.|+|+||||||
T Consensus 728 IFLd~~~~VKIGDFGLAt~~~~~~~~~d~~~~~~~~~~g~~~~~~Ts~VGTalYvAPEll~~~~~~~Yn~KiDmYSLGIV 807 (1351)
T KOG1035|consen 728 IFLDSRNSVKIGDFGLATDLKENLESIDQDLSFSTNRAGSNDGDLTSQVGTALYVAPELLSDTSSNKYNSKIDMYSLGIV 807 (1351)
T ss_pred eEEcCCCCeeecccccchhhhhhhhhHhhccCccccccCCCCcccccccceeeeecHHHhcccccccccchhhhHHHHHH
Confidence 999999999999999998621 123457899999999998654 9999999999999
Q ss_pred HHHHhhCCCCCCchhhHHHhhhhhhHh-hhcccCCC--CCchhHHHHHHHHHHhcccCcCCCCCHHHHHH
Q 014478 174 LLDLLSGKHIPPSHALDLIRSKNFLLL-MDSALEGH--FSNDEGTELVRLASRCLQSEARERPNAKSLVI 240 (424)
Q Consensus 174 l~el~~g~~~~~~~~~~~~~~~~~~~~-~~~~~~~~--~~~~~~~~l~~li~~cl~~dp~~Rps~~~~~~ 240 (424)
++||+. ||... ++....... .+..++.+ +..+.-+.-..+|.++++.||++|||+.|++.
T Consensus 808 lFEM~y---PF~Ts----MERa~iL~~LR~g~iP~~~~f~~~~~~~e~slI~~Ll~hdP~kRPtA~eLL~ 870 (1351)
T KOG1035|consen 808 LFEMLY---PFGTS----MERASILTNLRKGSIPEPADFFDPEHPEEASLIRWLLSHDPSKRPTATELLN 870 (1351)
T ss_pred HHHHhc---cCCch----HHHHHHHHhcccCCCCCCcccccccchHHHHHHHHHhcCCCccCCCHHHHhh
Confidence 999984 34433 333322222 22222222 11222345678999999999999999999886
|
|
| >smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.9e-34 Score=255.75 Aligned_cols=231 Identities=20% Similarity=0.244 Sum_probs=189.7
Q ss_pred CCcccceeeee--cceecccccCCCchh--hhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHhHhcc
Q 014478 3 GRCSKFSICWF--HCHLKSSVLESSDLG--ETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFH 78 (424)
Q Consensus 3 ~~g~v~~~~~~--~~~v~~~~~~~~~~~--~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~ 78 (424)
|+|.||.+.+. +..+++|++...... .+.+.+|++.+++++|+||+++++++..+...+++|||+++++|.+++..
T Consensus 1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~~~~ 80 (244)
T smart00220 1 SFGKVYLARDKKTGKLVAIKVIKKEKIKKKRERILREISILKKLKHPNIVRLYDVFEDEDKLYLVMEYCDGGDLFDLLKK 80 (244)
T ss_pred CceEEEEEEECCCCcEEEEEEecccccccHHHHHHHHHHHHHhCCCCcHHHHHhheeeCCEEEEEEeCCCCCCHHHHHHh
Confidence 68999999984 477787877654432 57899999999999999999999999998999999999999999999864
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCC---CccccCccCCCccc
Q 014478 79 WETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG---KSYSTNLAFTPPEY 155 (424)
Q Consensus 79 ~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~---~~~~gt~~y~aPE~ 155 (424)
...+++..++.++.+++.+|.+||+.+ ++|+||+|+||+++.++.++|+|||.+...... ....++..|++||.
T Consensus 81 --~~~~~~~~~~~~~~~l~~~l~~lh~~~-i~h~~i~~~ni~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~pE~ 157 (244)
T smart00220 81 --RGRLSEDEARFYARQILSALEYLHSNG-IIHRDLKPENILLDEDGHVKLADFGLARQLDPGGLLTTFVGTPEYMAPEV 157 (244)
T ss_pred --ccCCCHHHHHHHHHHHHHHHHHHHHcC-eecCCcCHHHeEECCCCcEEEccccceeeeccccccccccCCcCCCCHHH
Confidence 233899999999999999999999999 999999999999999999999999998876653 44567889999999
Q ss_pred cccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhcccCCCCCch--hHHHHHHHHHHhcccCcCCCC
Q 014478 156 MRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSND--EGTELVRLASRCLQSEARERP 233 (424)
Q Consensus 156 ~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~l~~li~~cl~~dp~~Rp 233 (424)
+.+..++.++||||||+++++|++|..|+.... .................... ++.++.+++.+||..+|++||
T Consensus 158 ~~~~~~~~~~Di~slG~~l~~l~~~~~p~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp 233 (244)
T smart00220 158 LLGKGYGKAVDVWSLGVILYELLTGKPPFPGDD----QLLELFKKIGKPKPPFPPPEWKISPEAKDLIRKLLVKDPEKRL 233 (244)
T ss_pred HccCCCCchhhHHHHHHHHHHHHhCCCCCCCCC----cHHHHHHHHhccCCCCccccccCCHHHHHHHHHHccCCchhcc
Confidence 988888999999999999999999997775520 11111111111111111111 678899999999999999999
Q ss_pred CHHHHHH
Q 014478 234 NAKSLVI 240 (424)
Q Consensus 234 s~~~~~~ 240 (424)
++.++++
T Consensus 234 ~~~~~~~ 240 (244)
T smart00220 234 TAEEALQ 240 (244)
T ss_pred CHHHHhh
Confidence 9999986
|
Phosphotransferases. Serine or threonine-specific kinase subfamily. |
| >KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-34 Score=253.56 Aligned_cols=231 Identities=20% Similarity=0.248 Sum_probs=189.6
Q ss_pred CCCcccceeee--ecceecccccCCCc----hhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHhH
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESSD----LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKH 75 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~~----~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~ 75 (424)
|.||.|..+.. .+.-.++|++++.. ....--+-|-++|+..+||.+..+--.|...+.+|+||||..||.|.-+
T Consensus 179 GTFGKVIL~rEKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~HPFLt~LKYsFQt~drlCFVMeyanGGeLf~H 258 (516)
T KOG0690|consen 179 GTFGKVILCREKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCRHPFLTSLKYSFQTQDRLCFVMEYANGGELFFH 258 (516)
T ss_pred CccceEEEEeecccCceeehhhhhhhheeehHHhhhhhhHHHHHHhccCcHHHHhhhhhccCceEEEEEEEccCceEeee
Confidence 67777776655 44556666665433 2334456789999999999999998899999999999999999999988
Q ss_pred hccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCC----CCCccccCccCC
Q 014478 76 LFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSR----DGKSYSTNLAFT 151 (424)
Q Consensus 76 l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~----~~~~~~gt~~y~ 151 (424)
|.+ ...+++....-+...|+.||.|||+++ ||+||||.+|.|+|.+|++||+|||+|+... ....++||+.|+
T Consensus 259 Lsr--er~FsE~RtRFYGaEIvsAL~YLHs~~-ivYRDlKLENLlLDkDGHIKitDFGLCKE~I~~g~t~kTFCGTPEYL 335 (516)
T KOG0690|consen 259 LSR--ERVFSEDRTRFYGAEIVSALGYLHSRN-IVYRDLKLENLLLDKDGHIKITDFGLCKEEIKYGDTTKTFCGTPEYL 335 (516)
T ss_pred hhh--hhcccchhhhhhhHHHHHHhhhhhhCC-eeeeechhhhheeccCCceEeeecccchhcccccceeccccCChhhc
Confidence 865 567899999999999999999999999 9999999999999999999999999998643 335789999999
Q ss_pred CccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHHHHHHHHHhcccCcCC
Q 014478 152 PPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARE 231 (424)
Q Consensus 152 aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~ 231 (424)
|||++....|+...|.|.+|+++|||++|+.||.....+ ..+..++-..+ .+|..++++...|+..+|.+||.+
T Consensus 336 APEVleDnDYgraVDWWG~GVVMYEMmCGRLPFyn~dh~----kLFeLIl~ed~--kFPr~ls~eAktLLsGLL~kdP~k 409 (516)
T KOG0690|consen 336 APEVLEDNDYGRAVDWWGVGVVMYEMMCGRLPFYNKDHE----KLFELILMEDL--KFPRTLSPEAKTLLSGLLKKDPKK 409 (516)
T ss_pred CchhhccccccceeehhhhhHHHHHHHhccCcccccchh----HHHHHHHhhhc--cCCccCCHHHHHHHHHHhhcChHh
Confidence 999999999999999999999999999999999875221 12222222222 467788999999999999999999
Q ss_pred CC-----CHHHHHHH
Q 014478 232 RP-----NAKSLVIS 241 (424)
Q Consensus 232 Rp-----s~~~~~~~ 241 (424)
|. .+.||.++
T Consensus 410 RLGgGpdDakEi~~h 424 (516)
T KOG0690|consen 410 RLGGGPDDAKEIMRH 424 (516)
T ss_pred hcCCCchhHHHHHhh
Confidence 93 45666554
|
|
| >cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-33 Score=288.58 Aligned_cols=132 Identities=20% Similarity=0.197 Sum_probs=118.4
Q ss_pred CCCcccceeeee--cceecccccCCCc----hhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHhH
Q 014478 2 GGRCSKFSICWF--HCHLKSSVLESSD----LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKH 75 (424)
Q Consensus 2 G~~g~v~~~~~~--~~~v~~~~~~~~~----~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~ 75 (424)
|+||.||.+.+. +..|++|++.... .....+..|+.++..++||||+++++++......||||||++|++|.++
T Consensus 15 G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lVmEy~~g~~L~~l 94 (669)
T cd05610 15 GAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALSKSPFIVHLYYSLQSANNVYLVMEYLIGGDVKSL 94 (669)
T ss_pred CCCeEEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcCCCCcCeEEEEEEECCEEEEEEeCCCCCCHHHH
Confidence 899999999985 7788888875432 2346788899999999999999999999999999999999999999999
Q ss_pred hccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccc
Q 014478 76 LFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMK 136 (424)
Q Consensus 76 l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~ 136 (424)
+.. ...+++..++.++.||+.||.|||.++ ||||||||+|||++.++.+||+|||+++
T Consensus 95 i~~--~~~l~~~~~~~i~~qil~aL~yLH~~g-IiHrDLKP~NILl~~~g~vkL~DFGls~ 152 (669)
T cd05610 95 LHI--YGYFDEEMAVKYISEVALALDYLHRHG-IIHRDLKPDNMLISNEGHIKLTDFGLSK 152 (669)
T ss_pred HHh--cCCCCHHHHHHHHHHHHHHHHHHHhCC-EEeCCccHHHEEEcCCCCEEEEeCCCCc
Confidence 864 356889999999999999999999999 9999999999999999999999999875
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481 |
| >KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-34 Score=256.84 Aligned_cols=238 Identities=15% Similarity=0.134 Sum_probs=188.6
Q ss_pred CCCcccceeee--ecceecccccCCCchhhhHHHHHHHHHhcCC-C-cC----cceeEEEEEeCCeeeEEEecCCCCCHH
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESSDLGETLNLEEAKAVGNLR-S-ER----LANLIGCCYEADERLLVAEFMPNETLA 73 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~~~~~~~~~~E~~~l~~l~-h-~~----iv~~~~~~~~~~~~~lv~e~~~~gsL~ 73 (424)
|.||.|...++ .+..|++|++.....-++..+-|+++|.++. + |+ +|++.++|...++.|||+|.+ |.|+.
T Consensus 100 GtFGkV~ec~D~~~~~~vAlKIik~V~kYreAa~iEi~vLqki~~~DP~g~~rcv~m~~wFdyrghiCivfell-G~S~~ 178 (415)
T KOG0671|consen 100 GTFGKVVECWDRETKEHVALKIIKNVDKYREAALIEIEVLQKINESDPNGKFRCVQMRDWFDYRGHICIVFELL-GLSTF 178 (415)
T ss_pred CcccceEEEeecCCCceehHHHHHHHHHHhhHHHHHHHHHHHHHhcCCCCceEEEeeehhhhccCceEEEEecc-ChhHH
Confidence 67888877766 4567899998888877888889999999993 2 33 788888999999999999999 67999
Q ss_pred hHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCC--------------------CCeEEcccc
Q 014478 74 KHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKD--------------------GNPRLSSFG 133 (424)
Q Consensus 74 ~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~--------------------~~~kl~Dfg 133 (424)
+++..+.-.+++...+..++.|++.+++|||+.. ++|-||||+|||+.+. -.++|+|||
T Consensus 179 dFlk~N~y~~fpi~~ir~m~~QL~~sv~fLh~~k-l~HTDLKPENILfvss~~~~~~~~k~~~~~~r~~ks~~I~vIDFG 257 (415)
T KOG0671|consen 179 DFLKENNYIPFPIDHIRHMGYQLLESVAFLHDLK-LTHTDLKPENILFVSSEYFKTYNPKKKVCFIRPLKSTAIKVIDFG 257 (415)
T ss_pred HHhccCCccccchHHHHHHHHHHHHHHHHHHhcc-eeecCCChheEEEeccceEEEeccCCccceeccCCCcceEEEecC
Confidence 9998877779999999999999999999999999 9999999999999431 247999999
Q ss_pred ccccCCCC-CccccCccCCCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHH----Hhh------------hh
Q 014478 134 LMKNSRDG-KSYSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDL----IRS------------KN 196 (424)
Q Consensus 134 ~~~~~~~~-~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~----~~~------------~~ 196 (424)
.++...+. .....|..|.|||++.+-.++..+||||+||+|.|+++|...|+.+...+ ++. ..
T Consensus 258 sAtf~~e~hs~iVsTRHYRAPEViLgLGwS~pCDvWSiGCIL~ElytG~~LFqtHen~EHLaMMerIlGp~P~~mi~r~~ 337 (415)
T KOG0671|consen 258 SATFDHEHHSTIVSTRHYRAPEVILGLGWSQPCDVWSIGCILVELYTGETLFQTHENLEHLAMMERILGPIPSRMIKKTR 337 (415)
T ss_pred CcceeccCcceeeeccccCCchheeccCcCCccCceeeeeEEEEeeccceecccCCcHHHHHHHHHhhCCCcHHHhhhhh
Confidence 99876654 45678999999999999999999999999999999999999888753111 000 00
Q ss_pred hhHhhhcc-c---------------CCCC--------CchhHHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 014478 197 FLLLMDSA-L---------------EGHF--------SNDEGTELVRLASRCLQSEARERPNAKSLVIS 241 (424)
Q Consensus 197 ~~~~~~~~-~---------------~~~~--------~~~~~~~l~~li~~cl~~dp~~Rps~~~~~~~ 241 (424)
..+..... + .... ....-.+|.+|+++||..||.+|+|+.|++.+
T Consensus 338 ~~Kyf~~~rldw~e~~~~~~~k~v~~~ckpl~~~~~~~d~e~~~LfDLl~~mL~fDP~~RiTl~EAL~H 406 (415)
T KOG0671|consen 338 KEKYFRRGRLDWPEVSSKGKSKYVFEPCKPLKKYMLQDDLEHVQLFDLLRRMLEFDPARRITLREALSH 406 (415)
T ss_pred hHhhhhcccccCccccccccchhhhcCCccHHHHhccCcHHHhHHHHHHHHHHccCccccccHHHHhcC
Confidence 00000000 0 0000 01123568999999999999999999999865
|
|
| >KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.9e-35 Score=267.65 Aligned_cols=236 Identities=16% Similarity=0.215 Sum_probs=198.8
Q ss_pred CCCCcccceeeeecce--ecccccCCCc----hhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHh
Q 014478 1 MGGRCSKFSICWFHCH--LKSSVLESSD----LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAK 74 (424)
Q Consensus 1 ~G~~g~v~~~~~~~~~--v~~~~~~~~~----~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~ 74 (424)
|||||.|=.+...+.. .+.|++++.+ ...+-...|-++|...+.|.||++|.-|.+....||.||-|-||.|+.
T Consensus 430 vGgFGRVELV~~~~~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~s~fIvrLYrTfrd~kyvYmLmEaClGGElWT 509 (732)
T KOG0614|consen 430 VGGFGRVELVKVNSQKATFALKILKKKHIVDTKQQEHVFSERNIMMECRSDFIVRLYRTFRDSKYVYMLMEACLGGELWT 509 (732)
T ss_pred cCccceEEEEEecccchHHHHHHHhHhhccchhHHHHHHhHHHHHHhcCchHHHHHHHHhccchhhhhhHHhhcCchhhh
Confidence 7999999988886665 4555554333 345567789999999999999999999999999999999999999999
Q ss_pred HhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCCC---ccccCccCC
Q 014478 75 HLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGK---SYSTNLAFT 151 (424)
Q Consensus 75 ~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~~---~~~gt~~y~ 151 (424)
.+.+ ++.|+..+..-++.-+++|++|||++| ||+|||||+|++++.+|-+||.|||+++.+..+. +++||+.|.
T Consensus 510 iLrd--Rg~Fdd~tarF~~acv~EAfeYLH~k~-iIYRDLKPENllLd~~Gy~KLVDFGFAKki~~g~KTwTFcGTpEYV 586 (732)
T KOG0614|consen 510 ILRD--RGSFDDYTARFYVACVLEAFEYLHRKG-IIYRDLKPENLLLDNRGYLKLVDFGFAKKIGSGRKTWTFCGTPEYV 586 (732)
T ss_pred hhhh--cCCcccchhhhhHHHHHHHHHHHHhcC-ceeccCChhheeeccCCceEEeehhhHHHhccCCceeeecCCcccc
Confidence 9975 678999999999999999999999999 9999999999999999999999999999887664 579999999
Q ss_pred CccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHHHHHHHHHhcccCcCC
Q 014478 152 PPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARE 231 (424)
Q Consensus 152 aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~ 231 (424)
|||.+.+...+.++|.||||+++|||++|.+||... +.+.. ...++...-...+|..++....++|++++..+|.+
T Consensus 587 APEIILnKGHD~avDyWaLGIli~ELL~G~pPFs~~--dpmkt--Yn~ILkGid~i~~Pr~I~k~a~~Lik~LCr~~P~E 662 (732)
T KOG0614|consen 587 APEIILNKGHDRAVDYWALGILIYELLTGSPPFSGV--DPMKT--YNLILKGIDKIEFPRRITKTATDLIKKLCRDNPTE 662 (732)
T ss_pred cchhhhccCcchhhHHHHHHHHHHHHHcCCCCCCCC--chHHH--HHHHHhhhhhhhcccccchhHHHHHHHHHhcCcHh
Confidence 999999999999999999999999999999888764 22222 22233333344567778889999999999999999
Q ss_pred CCC-----HHHHHHHHH
Q 014478 232 RPN-----AKSLVISLM 243 (424)
Q Consensus 232 Rps-----~~~~~~~l~ 243 (424)
|.- +.+|..|-+
T Consensus 663 RLG~~~~gI~DIkkH~W 679 (732)
T KOG0614|consen 663 RLGYQKGGINDIKKHRW 679 (732)
T ss_pred hhccccCChHHHHhhhh
Confidence 954 667766643
|
|
| >KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.3e-34 Score=247.72 Aligned_cols=238 Identities=13% Similarity=0.199 Sum_probs=181.6
Q ss_pred CCCcccceeeeec------ceecccccCCCchh---hhHHHHHHHHHhcCCCcCcceeEEEEEe-CCeeeEEEecCCCCC
Q 014478 2 GGRCSKFSICWFH------CHLKSSVLESSDLG---ETLNLEEAKAVGNLRSERLANLIGCCYE-ADERLLVAEFMPNET 71 (424)
Q Consensus 2 G~~g~v~~~~~~~------~~v~~~~~~~~~~~---~~~~~~E~~~l~~l~h~~iv~~~~~~~~-~~~~~lv~e~~~~gs 71 (424)
|.+|-||+++-.+ ..+++|+++..... .....+|+.+++.++||||+.+..++.. +...++++||.+. +
T Consensus 35 GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~tGiS~SAcREiaL~REl~h~nvi~Lv~Vfl~~d~~v~l~fdYAEh-D 113 (438)
T KOG0666|consen 35 GTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGTGISMSACREIALLRELKHPNVISLVKVFLSHDKKVWLLFDYAEH-D 113 (438)
T ss_pred cccceeeEeeeccCCcccchhhHHHHHhccCCCCCcCHHHHHHHHHHHHhcCCcchhHHHHHhccCceEEEEehhhhh-h
Confidence 7789999987522 24677777655322 3456789999999999999999999877 7789999999987 9
Q ss_pred HHhHhccC---CCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCC----CCeEEccccccccCCCC---
Q 014478 72 LAKHLFHW---ETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKD----GNPRLSSFGLMKNSRDG--- 141 (424)
Q Consensus 72 L~~~l~~~---~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~----~~~kl~Dfg~~~~~~~~--- 141 (424)
|...|+.. ....++...+..|+.||+.|+.|||++- |+||||||+|||+..+ |.|||+|||+++.....
T Consensus 114 L~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH~NW-vlHRDLKPaNIlvmgdgperG~VKIaDlGlaR~~~~plkp 192 (438)
T KOG0666|consen 114 LWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLHSNW-VLHRDLKPANILVMGDGPERGRVKIADLGLARLFNNPLKP 192 (438)
T ss_pred HHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHhhhh-eeeccCCcceEEEeccCCccCeeEeecccHHHHhhccccc
Confidence 99988633 2357899999999999999999999999 9999999999999877 89999999999976643
Q ss_pred ----CccccCccCCCccccccC-CCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhh--------hhhHhhhcccCCC
Q 014478 142 ----KSYSTNLAFTPPEYMRTG-RVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSK--------NFLLLMDSALEGH 208 (424)
Q Consensus 142 ----~~~~gt~~y~aPE~~~~~-~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~ 208 (424)
.....|+.|.|||.+.+. .|+.+.|||+.||++.||+|.++.|.....+.-... .+.+++.......
T Consensus 193 l~s~d~VVVTiWYRAPELLLGa~hYT~AiDvWAiGCIfaElLtl~PlF~g~E~k~~~~~Pfq~dQl~rIf~vLG~Pt~~~ 272 (438)
T KOG0666|consen 193 LASLDPVVVTIWYRAPELLLGARHYTKAIDVWAIGCIFAELLTLEPLFKGREEKIKTKNPFQHDQLDRIFEVLGTPTDKD 272 (438)
T ss_pred cccCCceEEEEEecChHHhcccccccchhhhHHHHHHHHHHHccCccccchhhhcccCCCchHHHHHHHHHHcCCCcccc
Confidence 233568999999999875 499999999999999999999977765422211110 0111110000000
Q ss_pred CC---------------------c-----------hhHHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 014478 209 FS---------------------N-----------DEGTELVRLASRCLQSEARERPNAKSLVIS 241 (424)
Q Consensus 209 ~~---------------------~-----------~~~~~l~~li~~cl~~dp~~Rps~~~~~~~ 241 (424)
+| . .-++...+|+.++|..||-+|.|+++.+++
T Consensus 273 Wp~lkk~Pe~q~~ls~f~~~~~~n~sL~~~~~~~k~k~~~a~~LL~klL~yDP~kRIta~qAleh 337 (438)
T KOG0666|consen 273 WPDLKKMPEYQTLLSDFRRHYYDNVSLHKYYHKHKVKDPSALDLLQKLLTYDPIKRITAEQALEH 337 (438)
T ss_pred chhhhhCcchHHHHHHhHHhhcCcchHHHHHHHhcCCCchHHHHHHHHhccCchhhccHHHHhcc
Confidence 00 0 012346899999999999999999999866
|
|
| >KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-33 Score=253.17 Aligned_cols=236 Identities=17% Similarity=0.211 Sum_probs=184.9
Q ss_pred CCCcccceeee--ecceecccccCCCchh--------hhHHHHHHHHHhcCCCcCcceeEEEEEe-CCeeeEEEecCCCC
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESSDLG--------ETLNLEEAKAVGNLRSERLANLIGCCYE-ADERLLVAEFMPNE 70 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~~~~--------~~~~~~E~~~l~~l~h~~iv~~~~~~~~-~~~~~lv~e~~~~g 70 (424)
|||+.||++.+ -.+.|++|+-.-...+ .+-..+|.++.+.|.||.||++|++|.- .+.+|-|.|||+|.
T Consensus 474 GGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLDHpRIVKlYDyfslDtdsFCTVLEYceGN 553 (775)
T KOG1151|consen 474 GGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDHPRIVKLYDYFSLDTDSFCTVLEYCEGN 553 (775)
T ss_pred ccHHHHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccCcceeeeeeeeeeeccccceeeeeecCCC
Confidence 89999999987 3455666665333222 2355689999999999999999999964 56788999999999
Q ss_pred CHHhHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCC-CcccccCCCCCeeec---CCCCeEEccccccccCCCCC----
Q 014478 71 TLAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKG-RALYHDLNAYRILFD---KDGNPRLSSFGLMKNSRDGK---- 142 (424)
Q Consensus 71 sL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~-~ivH~dikp~Nill~---~~~~~kl~Dfg~~~~~~~~~---- 142 (424)
+|.-||+. ...+++.++..|+-||+.||.||.+.. ||||=||||.|||+. ..|.+||+|||+++......
T Consensus 554 DLDFYLKQ--hklmSEKEARSIiMQiVnAL~YLNEikpPIIHYDLKPgNILLv~GtacGeIKITDFGLSKIMdddSy~~v 631 (775)
T KOG1151|consen 554 DLDFYLKQ--HKLMSEKEARSIIMQIVNALKYLNEIKPPIIHYDLKPGNILLVNGTACGEIKITDFGLSKIMDDDSYNSV 631 (775)
T ss_pred chhHHHHh--hhhhhHHHHHHHHHHHHHHHHHHhccCCCeeeeccCCccEEEecCcccceeEeeecchhhhccCCccCcc
Confidence 99999964 668999999999999999999999864 599999999999994 34789999999999765432
Q ss_pred -------ccccCccCCCccccccC----CCCCCcceehhHHHHHHHhhCCCCCCchhhH--HHhhhhhhHhhhcccCCCC
Q 014478 143 -------SYSTNLAFTPPEYMRTG----RVTPESVVYSFGTMLLDLLSGKHIPPSHALD--LIRSKNFLLLMDSALEGHF 209 (424)
Q Consensus 143 -------~~~gt~~y~aPE~~~~~----~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~ 209 (424)
...||+.|++||++.-+ +.+.+.||||.||++|+++.|+.||...-.. ......+ +.......+.
T Consensus 632 dGmeLTSQgAGTYWYLPPEcFvVgkePPKIsnKVDVWSvGVIFyQClYGrKPFGhnqsQQdILqeNTI--lkAtEVqFP~ 709 (775)
T KOG1151|consen 632 DGMELTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVGVIFYQCLYGRKPFGHNQSQQDILQENTI--LKATEVQFPP 709 (775)
T ss_pred cceeeecccCceeeecCcceeecCCCCCccccceeeEeeehhhhhhhccCCCCCCchhHHHHHhhhch--hcceeccCCC
Confidence 23689999999998744 4788999999999999999999998764221 1111111 1111222233
Q ss_pred CchhHHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 014478 210 SNDEGTELVRLASRCLQSEARERPNAKSLVIS 241 (424)
Q Consensus 210 ~~~~~~~l~~li~~cl~~dp~~Rps~~~~~~~ 241 (424)
.+.++.+..+||++||+..-++|.+..++..+
T Consensus 710 KPvVsseAkaFIRRCLaYRKeDR~DV~qLA~d 741 (775)
T KOG1151|consen 710 KPVVSSEAKAFIRRCLAYRKEDRIDVQQLACD 741 (775)
T ss_pred CCccCHHHHHHHHHHHHhhhhhhhhHHHHccC
Confidence 44678899999999999999999988887643
|
|
| >KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.2e-34 Score=262.80 Aligned_cols=232 Identities=17% Similarity=0.176 Sum_probs=190.8
Q ss_pred CCCcccceeee--ecceecccccCC---CchhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHhHh
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLES---SDLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHL 76 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~---~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~l 76 (424)
|-||+||.+.. .+..|++|++.+ ........++|+.+|+.+.||.||.+--.|+..+..++|||-+-| ++.+.|
T Consensus 575 GQFG~VYgg~hRktGrdVAvKvIdKlrFp~kqesqlR~EVaILq~l~HPGiV~le~M~ET~ervFVVMEKl~G-DMLEMI 653 (888)
T KOG4236|consen 575 GQFGTVYGGKHRKTGRDVAVKVIDKLRFPTKQESQLRNEVAILQNLHHPGIVNLECMFETPERVFVVMEKLHG-DMLEMI 653 (888)
T ss_pred CcceeeecceecccCceeeeeeeecccCCCchHHHHHHHHHHHHhcCCCCeeEEEEeecCCceEEEEehhhcc-hHHHHH
Confidence 67899999987 789999998854 334457888999999999999999999999999999999999965 555555
Q ss_pred ccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCC---CCeEEccccccccCCCC---CccccCccC
Q 014478 77 FHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKD---GNPRLSSFGLMKNSRDG---KSYSTNLAF 150 (424)
Q Consensus 77 ~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~---~~~kl~Dfg~~~~~~~~---~~~~gt~~y 150 (424)
-..+.+++++....-++.||+.||.|||.++ |+|+||||+|||+... -.+||||||+++.+++. .+..||+.|
T Consensus 654 LSsEkgRL~er~TkFlvtQIL~ALr~LH~kn-IvHCDLKPENVLLas~~~FPQvKlCDFGfARiIgEksFRrsVVGTPAY 732 (888)
T KOG4236|consen 654 LSSEKGRLPERITKFLVTQILVALRYLHFKN-IVHCDLKPENVLLASASPFPQVKLCDFGFARIIGEKSFRRSVVGTPAY 732 (888)
T ss_pred HHhhcccchHHHHHHHHHHHHHHHHHhhhcc-eeeccCCchheeeccCCCCCceeeccccceeecchhhhhhhhcCCccc
Confidence 4447788999988889999999999999999 9999999999999544 36999999999998764 467899999
Q ss_pred CCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhcc---cCCCCCchhHHHHHHHHHHhccc
Q 014478 151 TPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSA---LEGHFSNDEGTELVRLASRCLQS 227 (424)
Q Consensus 151 ~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~l~~li~~cl~~ 227 (424)
+|||++....|+..-|+||.|+++|--++|..||-.+ +.... .+... .+...-..++++..+||...|+.
T Consensus 733 LaPEVLrnkGyNrSLDMWSVGVIiYVsLSGTFPFNEd--EdInd-----QIQNAaFMyPp~PW~eis~~AidlIn~LLqV 805 (888)
T KOG4236|consen 733 LAPEVLRNKGYNRSLDMWSVGVIIYVSLSGTFPFNED--EDIND-----QIQNAAFMYPPNPWSEISPEAIDLINNLLQV 805 (888)
T ss_pred cCHHHHhhccccccccceeeeEEEEEEecccccCCCc--cchhH-----HhhccccccCCCchhhcCHHHHHHHHHHHHH
Confidence 9999999999999999999999999999998666543 21211 11111 11111234678899999999999
Q ss_pred CcCCCCCHHHHHHHH
Q 014478 228 EARERPNAKSLVISL 242 (424)
Q Consensus 228 dp~~Rps~~~~~~~l 242 (424)
.-.+|-|.+.-+.+.
T Consensus 806 km~kRysvdk~lsh~ 820 (888)
T KOG4236|consen 806 KMRKRYSVDKSLSHP 820 (888)
T ss_pred HHHHhcchHhhccch
Confidence 999999998887653
|
|
| >KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.8e-33 Score=252.62 Aligned_cols=241 Identities=17% Similarity=0.229 Sum_probs=184.9
Q ss_pred CCCcccceeeeecceecccccCCCchhhhHHHHHHHHHhcC--CCcCcceeEEEEEeCC----eeeEEEecCCCCCHHhH
Q 014478 2 GGRCSKFSICWFHCHLKSSVLESSDLGETLNLEEAKAVGNL--RSERLANLIGCCYEAD----ERLLVAEFMPNETLAKH 75 (424)
Q Consensus 2 G~~g~v~~~~~~~~~v~~~~~~~~~~~~~~~~~E~~~l~~l--~h~~iv~~~~~~~~~~----~~~lv~e~~~~gsL~~~ 75 (424)
|-||.|+++.|.|..||||++...++ ..+++|.++.+.+ +|+||+.|++.-..+. ++|||++|-+.|||.|+
T Consensus 222 GRyGEVwrG~wrGe~VAVKiF~srdE--~SWfrEtEIYqTvmLRHENILgFIaaD~~~~gs~TQLwLvTdYHe~GSL~Dy 299 (513)
T KOG2052|consen 222 GRFGEVWRGRWRGEDVAVKIFSSRDE--RSWFRETEIYQTVMLRHENILGFIAADNKDNGSWTQLWLVTDYHEHGSLYDY 299 (513)
T ss_pred ccccceeeccccCCceEEEEecccch--hhhhhHHHHHHHHHhccchhhhhhhccccCCCceEEEEEeeecccCCcHHHH
Confidence 78999999999999999999976653 4566677766654 9999999999876543 47999999999999999
Q ss_pred hccCCCCCCCHHHHHHHHHHHHHHHHHHHhC-----C--CcccccCCCCCeeecCCCCeEEccccccccCCCC-------
Q 014478 76 LFHWETQPMKWAMRLRVALYLAQALEYCSSK-----G--RALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG------- 141 (424)
Q Consensus 76 l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~-----~--~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~------- 141 (424)
|. ...++....++++..+++||+|||.. | .|.|||||+.|||+..+|.+.|+|+|+|......
T Consensus 300 L~---r~tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILVKkn~~C~IADLGLAv~h~~~t~~idi~ 376 (513)
T KOG2052|consen 300 LN---RNTVTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSDTDTIDIP 376 (513)
T ss_pred Hh---hccCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccccccEEEccCCcEEEeeceeeEEecccCCcccCC
Confidence 95 46899999999999999999999963 2 2999999999999999999999999999765533
Q ss_pred -CccccCccCCCccccccCC----C--CCCcceehhHHHHHHHhhCC----------CCCCch-----hhHHHhhhhhhH
Q 014478 142 -KSYSTNLAFTPPEYMRTGR----V--TPESVVYSFGTMLLDLLSGK----------HIPPSH-----ALDLIRSKNFLL 199 (424)
Q Consensus 142 -~~~~gt~~y~aPE~~~~~~----~--~~~~Dv~slG~~l~el~~g~----------~~~~~~-----~~~~~~~~~~~~ 199 (424)
....||..|||||++...- + -..+||||||.|+||+.-.- .||... +.+.+..-.-.+
T Consensus 377 ~N~rVGTKRYMAPEvLdetin~~~Fesyk~ADIYafgLVlWEiarRc~~ggi~eey~~Pyyd~Vp~DPs~eeMrkVVCv~ 456 (513)
T KOG2052|consen 377 PNPRVGTKRYMAPEVLDETINMKHFESYKRADIYAFGLVLWEIARRCESGGIVEEYQLPYYDVVPSDPSFEEMRKVVCVQ 456 (513)
T ss_pred CCCccceeeccChHHhhhhcChhhhhhhhHHHHHHHHHHHHHHHHHhhcCCEehhhcCCcccCCCCCCCHHHHhcceeec
Confidence 3457999999999997431 1 23689999999999996422 233321 112222211111
Q ss_pred hhhcccCCCC-CchhHHHHHHHHHHhcccCcCCCCCHHHHHHHHHHHhh
Q 014478 200 LMDSALEGHF-SNDEGTELVRLASRCLQSEARERPNAKSLVISLMSLQK 247 (424)
Q Consensus 200 ~~~~~~~~~~-~~~~~~~l~~li~~cl~~dp~~Rps~~~~~~~l~~~~~ 247 (424)
...+.++..+ +..+-..+.++++.||..+|.-|-|+--+.+.|.++.+
T Consensus 457 ~~RP~ipnrW~s~~~l~~m~klMkeCW~~Np~aRltALriKKtl~~l~~ 505 (513)
T KOG2052|consen 457 KLRPNIPNRWKSDPALRVMAKLMKECWYANPAARLTALRIKKTLAKLSN 505 (513)
T ss_pred ccCCCCCcccccCHHHHHHHHHHHHhhcCCchhhhHHHHHHHHHHHHhc
Confidence 2222222222 23455678899999999999999999999888888764
|
|
| >KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7e-34 Score=240.20 Aligned_cols=238 Identities=21% Similarity=0.247 Sum_probs=177.8
Q ss_pred CCCcccceeeee--cceeccccc--CCCchh-hhHHHHHHHHHhcCCCcCcceeEEEEEeC--------CeeeEEEecCC
Q 014478 2 GGRCSKFSICWF--HCHLKSSVL--ESSDLG-ETLNLEEAKAVGNLRSERLANLIGCCYEA--------DERLLVAEFMP 68 (424)
Q Consensus 2 G~~g~v~~~~~~--~~~v~~~~~--~~~~~~-~~~~~~E~~~l~~l~h~~iv~~~~~~~~~--------~~~~lv~e~~~ 68 (424)
|.||.||++... +..|+.++. +....+ ....++|+++|..|+|+|++.++.+|... ..+|+||.+|+
T Consensus 28 GtfgeVFkAr~~n~~kkvalkkvlmeneKeGfpitalreikiL~~lkHenv~nliEic~tk~Tp~~r~r~t~ylVf~~ce 107 (376)
T KOG0669|consen 28 GTFGEVFKARSKNTGKKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPTNRDRATFYLVFDFCE 107 (376)
T ss_pred chHHHHHHHhhcCccchhHHHHHHHhccccCCcHHHHHHHHHHHHhcchhHHHHHHHHhhccCCcccccceeeeeHHHhh
Confidence 778889998873 344444332 332222 34567899999999999999999888542 34799999998
Q ss_pred CCCHHhHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCCC------
Q 014478 69 NETLAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGK------ 142 (424)
Q Consensus 69 ~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~~------ 142 (424)
. +|.-++.+ ....++..++.+++.++..||.|+|++. |+|||+|++|+||+.+|.+||+|||+++......
T Consensus 108 h-DLaGlLsn-~~vr~sls~Ikk~Mk~Lm~GL~~iHr~k-ilHRDmKaaNvLIt~dgilklADFGlar~fs~~~n~~kpr 184 (376)
T KOG0669|consen 108 H-DLAGLLSN-RKVRFSLSEIKKVMKGLMNGLYYIHRNK-ILHRDMKAANVLITKDGILKLADFGLARAFSTSKNVVKPR 184 (376)
T ss_pred h-hHHHHhcC-ccccccHHHHHHHHHHHHHHHHHHHHhh-HHhhcccHhhEEEcCCceEEeeccccccceecccccCCCC
Confidence 7 99998865 3468999999999999999999999999 9999999999999999999999999997654332
Q ss_pred --ccccCccCCCccccccC-CCCCCcceehhHHHHHHHhhCCCCCCchhhH----------------HHhhhhhhHhhhc
Q 014478 143 --SYSTNLAFTPPEYMRTG-RVTPESVVYSFGTMLLDLLSGKHIPPSHALD----------------LIRSKNFLLLMDS 203 (424)
Q Consensus 143 --~~~gt~~y~aPE~~~~~-~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~----------------~~~~~~~~~~~~~ 203 (424)
....|..|.+||.+.+. .++++.|||+-||++.||+++.+.+.+.... .|.+.....++..
T Consensus 185 ytnrvvTLwYrppEllLG~r~yg~~iDiWgAgCimaeMwtrspimqgnteqqql~~Is~LcGs~tkevWP~~d~lpL~~s 264 (376)
T KOG0669|consen 185 YTNRVVTLWYRPPELLLGDREYGPPIDIWGAGCIMAEMWTRSPIMQGNTEQQQLHLISQLCGSITKEVWPNVDNLPLYQS 264 (376)
T ss_pred cccceeeeecCCHHHhhcccccCCcchhHhHHHHHHHHHccCccccCChHHHHHHHHHHHhccCCcccCCCcccchHHHh
Confidence 22348999999999865 5999999999999999999999776654111 0000000011111
Q ss_pred ccCCCCCc-------------hhHHHHHHHHHHhcccCcCCCCCHHHHHHHH
Q 014478 204 ALEGHFSN-------------DEGTELVRLASRCLQSEARERPNAKSLVISL 242 (424)
Q Consensus 204 ~~~~~~~~-------------~~~~~l~~li~~cl~~dp~~Rps~~~~~~~l 242 (424)
.-.++.+. .-.++..++++++|..||.+|+++++++.+-
T Consensus 265 ie~ePl~~~~~rkv~n~~kp~~kd~~a~dLle~ll~~DP~kR~~ad~alnh~ 316 (376)
T KOG0669|consen 265 IELEPLPKGQKRKVKNRLKPYVKDDEALDLLEKLLKLDPTKRIDADQALNHD 316 (376)
T ss_pred ccCCCCCcchhhhhhhhcccccCChhHHHHHHHHhccCcccCcchHhhhchh
Confidence 00010111 0124678999999999999999999998764
|
|
| >KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.8e-33 Score=260.88 Aligned_cols=226 Identities=17% Similarity=0.190 Sum_probs=174.2
Q ss_pred CCCCcccceeee--ecceecccccCCCchh----hhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHh
Q 014478 1 MGGRCSKFSICW--FHCHLKSSVLESSDLG----ETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAK 74 (424)
Q Consensus 1 ~G~~g~v~~~~~--~~~~v~~~~~~~~~~~----~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~ 74 (424)
+|+||.|+.++- +..-++.|.+.+.+-- ..-...|-.+|..-.++-||++|-.|.+++.+|+||+|++||++-.
T Consensus 639 vGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEADn~WVVrLyySFQDkdnLYFVMdYIPGGDmMS 718 (1034)
T KOG0608|consen 639 VGAFGEVCLVRKVDTRALYAMKTLRKADVLMRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVMDYIPGGDMMS 718 (1034)
T ss_pred ccccceeEEEeecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhcCCcceEEEEEEeccCCceEEEEeccCCccHHH
Confidence 589999998764 4444555555443311 2234458889999999999999999999999999999999999999
Q ss_pred HhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCC--------------
Q 014478 75 HLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRD-------------- 140 (424)
Q Consensus 75 ~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~-------------- 140 (424)
+|.+ .+-|++..+.-++.++.+|+++.|..| +|||||||+|||||.+|++||+|||||.-+.-
T Consensus 719 LLIr--mgIFeE~LARFYIAEltcAiesVHkmG-FIHRDiKPDNILIDrdGHIKLTDFGLCTGfRWTHdskYYq~gdH~R 795 (1034)
T KOG0608|consen 719 LLIR--MGIFEEDLARFYIAELTCAIESVHKMG-FIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSKYYQEGDHHR 795 (1034)
T ss_pred HHHH--hccCHHHHHHHHHHHHHHHHHHHHhcc-ceecccCccceEEccCCceeeeeccccccceeccccccccCCCccc
Confidence 9875 467888888899999999999999999 99999999999999999999999999863210
Q ss_pred --------------------------------CCccccCccCCCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchh
Q 014478 141 --------------------------------GKSYSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHA 188 (424)
Q Consensus 141 --------------------------------~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~ 188 (424)
.....||+.|+|||++....++..+|.||.||+||||+.|+.||-...
T Consensus 796 qDSmep~~e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyiapevl~r~g~~q~cdwws~gvil~em~~g~~pf~~~t 875 (1034)
T KOG0608|consen 796 QDSMEPSPEWADISKCLKVLERRAMRQHQRILAHSLVGTPNYIAPEVLARTGYTQLCDWWSVGVILYEMLVGQPPFLADT 875 (1034)
T ss_pred cccCCCchhhccccccchHHHHHHHhhhhhhhhhhhcCCCcccChHHhcccCccccchhhHhhHHHHHHhhCCCCccCCC
Confidence 002357999999999998899999999999999999999998876541
Q ss_pred hHHHhhhhhhHhhhcccCCCCCchhHHHHHHHHHHhcccCcCCC
Q 014478 189 LDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARER 232 (424)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~R 232 (424)
- .+.+.....+...+.......++.++.++|.+++. +++.|
T Consensus 876 p--~~tq~kv~nw~~~l~~~~~~~ls~e~~~li~kLc~-sad~R 916 (1034)
T KOG0608|consen 876 P--GETQYKVINWRNFLHIPYQGNLSKEALDLIQKLCC-SADSR 916 (1034)
T ss_pred C--CcceeeeeehhhccccccccccCHHHHHHHHHHhc-Chhhh
Confidence 1 11111122222333333445678888888877543 45666
|
|
| >KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-33 Score=251.80 Aligned_cols=223 Identities=18% Similarity=0.270 Sum_probs=187.5
Q ss_pred CCCcccceeeeecc--eecccccCCCc----hhhhHHHHHHHHHhcC-CCcCcceeEEEEEeCCeeeEEEecCCCCCHHh
Q 014478 2 GGRCSKFSICWFHC--HLKSSVLESSD----LGETLNLEEAKAVGNL-RSERLANLIGCCYEADERLLVAEFMPNETLAK 74 (424)
Q Consensus 2 G~~g~v~~~~~~~~--~v~~~~~~~~~----~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~ 74 (424)
|+||.|..+...++ -.++|+++++. .+.+.-+.|-++|.-. +-|.+++++..|...+.+|+||||+.||+|--
T Consensus 360 GSFGKVlLaerkgtdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~kppFL~qlHScFQTmDRLyFVMEyvnGGDLMy 439 (683)
T KOG0696|consen 360 GSFGKVLLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLVQLHSCFQTMDRLYFVMEYVNGGDLMY 439 (683)
T ss_pred CccceeeeecccCcchhhhhhhhccceeeecCcccceehhhhheecCCCCchHHHHHHHhhhhhheeeEEEEecCchhhh
Confidence 88999988877443 35677665443 3455667788888766 67889999999999999999999999999998
Q ss_pred HhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCC----CCCccccCccC
Q 014478 75 HLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSR----DGKSYSTNLAF 150 (424)
Q Consensus 75 ~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~----~~~~~~gt~~y 150 (424)
.++. -+.+.++.++-++.+|+-||-|||++| ||+||||.+||+++.+|++||+|||+++..- ...+++||+.|
T Consensus 440 hiQQ--~GkFKEp~AvFYAaEiaigLFFLh~kg-IiYRDLKLDNvmLd~eGHiKi~DFGmcKEni~~~~TTkTFCGTPdY 516 (683)
T KOG0696|consen 440 HIQQ--VGKFKEPVAVFYAAEIAIGLFFLHSKG-IIYRDLKLDNVMLDSEGHIKIADFGMCKENIFDGVTTKTFCGTPDY 516 (683)
T ss_pred HHHH--hcccCCchhhhhhHHHHHHhhhhhcCC-eeeeeccccceEeccCCceEeeecccccccccCCcceeeecCCCcc
Confidence 8864 567889999999999999999999999 9999999999999999999999999998643 23567899999
Q ss_pred CCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHHHHHHHHHhcccCcC
Q 014478 151 TPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEAR 230 (424)
Q Consensus 151 ~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~ 230 (424)
+|||.+...+|+...|.||||++||||+.|++||.+.. +...+..+.+.. -.+|..+|.+..++....|.+.|.
T Consensus 517 iAPEIi~YqPYgksvDWWa~GVLLyEmlaGQpPFdGeD----E~elF~aI~ehn--vsyPKslSkEAv~ickg~ltK~P~ 590 (683)
T KOG0696|consen 517 IAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGED----EDELFQAIMEHN--VSYPKSLSKEAVAICKGLLTKHPG 590 (683)
T ss_pred cccceEEecccccchhHHHHHHHHHHHHcCCCCCCCCC----HHHHHHHHHHcc--CcCcccccHHHHHHHHHHhhcCCc
Confidence 99999999999999999999999999999999988762 222233333332 246788899999999999999999
Q ss_pred CCC
Q 014478 231 ERP 233 (424)
Q Consensus 231 ~Rp 233 (424)
+|.
T Consensus 591 kRL 593 (683)
T KOG0696|consen 591 KRL 593 (683)
T ss_pred ccc
Confidence 994
|
|
| >KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.4e-32 Score=241.40 Aligned_cols=242 Identities=18% Similarity=0.214 Sum_probs=199.0
Q ss_pred CCCcccceeeeecce-------eccc--ccCCCchhhhHHHHHHHHHhcCCCcCcceeEEEEEeC-CeeeEEEecCCCCC
Q 014478 2 GGRCSKFSICWFHCH-------LKSS--VLESSDLGETLNLEEAKAVGNLRSERLANLIGCCYEA-DERLLVAEFMPNET 71 (424)
Q Consensus 2 G~~g~v~~~~~~~~~-------v~~~--~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~-~~~~lv~e~~~~gs 71 (424)
|.||.||++.|.... +-+| +-..++.....++.|.-.+..+.|||+..+.+++.++ ..+++++.++.-|+
T Consensus 295 GtFGri~~gI~~eEdt~n~~q~v~vKTvk~~AS~iQv~~~L~es~lly~~sH~nll~V~~V~ie~~~~P~V~y~~~~~gN 374 (563)
T KOG1024|consen 295 GTFGRIYRGIWREEDTYNDCQEVLVKTVKQHASQIQVNLLLQESMLLYGASHPNLLSVLGVSIEDYATPFVLYPATGVGN 374 (563)
T ss_pred CchhheeeeeecccCCcchHHHHHHHHHHhcccHHHHHHHHHHHHHHhcCcCCCccceeEEEeeccCcceEEEeccCcch
Confidence 889999999884322 2222 3345556678899999999999999999999998764 56889999999999
Q ss_pred HHhHhccC------CCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCCCcc-
Q 014478 72 LAKHLFHW------ETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSY- 144 (424)
Q Consensus 72 L~~~l~~~------~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~~~~- 144 (424)
|..++.-. ..+.++..+.+.++.|++.|++|||+.+ +||.||...|++|++...+||+|=.+++...+....
T Consensus 375 LK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh~~~-ViHkDiAaRNCvIdd~LqVkltDsaLSRDLFP~DYhc 453 (563)
T KOG1024|consen 375 LKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLHNHG-VIHKDIAARNCVIDDQLQVKLTDSALSRDLFPGDYHC 453 (563)
T ss_pred HHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHHhcC-cccchhhhhcceehhheeEEeccchhccccCcccccc
Confidence 99999621 2446778899999999999999999999 999999999999999999999999999977654322
Q ss_pred -----ccCccCCCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHHHHH
Q 014478 145 -----STNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVR 219 (424)
Q Consensus 145 -----~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 219 (424)
.....||+||.+....++..+||||||+++|||+|....+..+ .+.......+....+-..|.+||.+|..
T Consensus 454 LGDnEnRPvkWMslEal~n~~yssasDvWsfGVllWELmtlg~~Pyae----IDPfEm~~ylkdGyRlaQP~NCPDeLf~ 529 (563)
T KOG1024|consen 454 LGDNENRPVKWMSLEALQNSHYSSASDVWSFGVLLWELMTLGKLPYAE----IDPFEMEHYLKDGYRLAQPFNCPDELFT 529 (563)
T ss_pred cCCCCCCcccccCHHHHhhhhhcchhhhHHHHHHHHHHHhcCCCCccc----cCHHHHHHHHhccceecCCCCCcHHHHH
Confidence 2357899999999999999999999999999999854333322 3333444556667777888999999999
Q ss_pred HHHHhcccCcCCCCCHHHHHHHHHHHhhh
Q 014478 220 LASRCLQSEARERPNAKSLVISLMSLQKE 248 (424)
Q Consensus 220 li~~cl~~dp~~Rps~~~~~~~l~~~~~~ 248 (424)
++..||+.+|++||++++++..|...-.+
T Consensus 530 vMacCWallpeeRPsf~Qlv~cLseF~~q 558 (563)
T KOG1024|consen 530 VMACCWALLPEERPSFSQLVICLSEFHTQ 558 (563)
T ss_pred HHHHHHhcCcccCCCHHHHHHHHHHHHHH
Confidence 99999999999999999999988776443
|
|
| >KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.98 E-value=1.5e-32 Score=220.94 Aligned_cols=237 Identities=19% Similarity=0.253 Sum_probs=182.5
Q ss_pred CCCcccceeee--ecceecccccCCCc--hh-hhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHhHh
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESSD--LG-ETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHL 76 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~~--~~-~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~l 76 (424)
|.+|+||++.. ....|+.|...-++ ++ ....++|+-+|+.++|.|||+++++.-.++.+.+|+|||+. +|..+.
T Consensus 13 gtygtvfkarn~~t~eivalkrvrlddddegvpssalreicllkelkhknivrl~dvlhsdkkltlvfe~cdq-dlkkyf 91 (292)
T KOG0662|consen 13 GTYGTVFKARNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEFCDQ-DLKKYF 91 (292)
T ss_pred CcceeeEecccCCccceEEEEEEeccCCCCCCcHHHHHHHHHHHHhhhcceeehhhhhccCceeEEeHHHhhH-HHHHHH
Confidence 78899999875 44556666554333 22 45778999999999999999999999888899999999965 899887
Q ss_pred ccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCC----CccccCccCCC
Q 014478 77 FHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG----KSYSTNLAFTP 152 (424)
Q Consensus 77 ~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~----~~~~gt~~y~a 152 (424)
.. -.+.++.+.+..++.|+++||.|+|+++ ++|||+||.|.||+.+|.+|++|||+++-.+-. .....|..|.+
T Consensus 92 ds-lng~~d~~~~rsfmlqllrgl~fchshn-vlhrdlkpqnllin~ngelkladfglarafgipvrcysaevvtlwyrp 169 (292)
T KOG0662|consen 92 DS-LNGDLDPEIVRSFMLQLLRGLGFCHSHN-VLHRDLKPQNLLINRNGELKLADFGLARAFGIPVRCYSAEVVTLWYRP 169 (292)
T ss_pred Hh-cCCcCCHHHHHHHHHHHHhhhhhhhhhh-hhhccCCcceEEeccCCcEEecccchhhhcCCceEeeeceeeeeeccC
Confidence 65 3567999999999999999999999999 999999999999999999999999999876543 23456899999
Q ss_pred ccccccCC-CCCCcceehhHHHHHHHhh-CCCCCCchhhHHHhhhhhhHhh--------------hcccCCCCCc-----
Q 014478 153 PEYMRTGR-VTPESVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKNFLLLM--------------DSALEGHFSN----- 211 (424)
Q Consensus 153 PE~~~~~~-~~~~~Dv~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~----- 211 (424)
|+++.+.+ |+...|+||-||++.|+.. |.+.||+...+..-...+..+- +....+.+|.
T Consensus 170 pdvlfgakly~tsidmwsagcifaelanagrplfpg~dvddqlkrif~~lg~p~ed~wps~t~lpdyk~yp~ypattsws 249 (292)
T KOG0662|consen 170 PDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEDQWPSMTKLPDYKPYPIYPATTSWS 249 (292)
T ss_pred cceeeeeehhccchHhhhcchHHHHHhhcCCCCCCCCcHHHHHHHHHHHhCCCccccCCccccCCCCcccCCccccchHH
Confidence 99999766 8999999999999999976 5555666422211111111111 1111111111
Q ss_pred ----hhHHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 014478 212 ----DEGTELVRLASRCLQSEARERPNAKSLVIS 241 (424)
Q Consensus 212 ----~~~~~l~~li~~cl~~dp~~Rps~~~~~~~ 241 (424)
.+...=++++.+.|.-+|.+|.|+++.+++
T Consensus 250 qivp~lns~grdllqkll~cnp~qrisaeaalqh 283 (292)
T KOG0662|consen 250 QIVPKLNSTGRDLLQKLLKCNPAQRISAEAALQH 283 (292)
T ss_pred HHhhhhcchhHHHHHHHhccCcccccCHHHHhcC
Confidence 122345799999999999999999988754
|
|
| >KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.98 E-value=9.3e-33 Score=267.99 Aligned_cols=228 Identities=18% Similarity=0.166 Sum_probs=176.1
Q ss_pred cccceeeeecceecccccCCCchhhhHHHHHHHHHhcC-CCcCcceeEEEEEeCCeeeEEEecCCCCCHHhHhccC--CC
Q 014478 5 CSKFSICWFHCHLKSSVLESSDLGETLNLEEAKAVGNL-RSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHW--ET 81 (424)
Q Consensus 5 g~v~~~~~~~~~v~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~--~~ 81 (424)
+.||++.+-++.||+|.+.... .+...+|+..|+.- .|||||++|+.-.+....||..|+|.. +|.+++... +.
T Consensus 524 t~Vf~G~ye~R~VAVKrll~e~--~~~A~rEi~lL~eSD~H~NviRyyc~E~d~qF~YIalELC~~-sL~dlie~~~~d~ 600 (903)
T KOG1027|consen 524 TVVFRGVYEGREVAVKRLLEEF--FDFAQREIQLLQESDEHPNVIRYYCSEQDRQFLYIALELCAC-SLQDLIESSGLDV 600 (903)
T ss_pred cEEEEEeeCCceehHHHHhhHh--HHHHHHHHHHHHhccCCCceEEEEeeccCCceEEEEehHhhh-hHHHHHhccccch
Confidence 3578999999999999876554 34567899999988 799999999999999999999999966 999999652 11
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecC---C--CCeEEccccccccCCCC-------CccccCcc
Q 014478 82 QPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDK---D--GNPRLSSFGLMKNSRDG-------KSYSTNLA 149 (424)
Q Consensus 82 ~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~---~--~~~kl~Dfg~~~~~~~~-------~~~~gt~~ 149 (424)
........+.++.|+++||++||+-+ ||||||||.||||+. + .+++|+|||+++....+ ....||-+
T Consensus 601 ~~~~~i~~~~~l~q~~~GlaHLHsl~-iVHRDLkPQNILI~~~~~~~~~ra~iSDfglsKkl~~~~sS~~r~s~~sGt~G 679 (903)
T KOG1027|consen 601 EMQSDIDPISVLSQIASGLAHLHSLK-IVHRDLKPQNILISVPSADGTLRAKISDFGLSKKLAGGKSSFSRLSGGSGTSG 679 (903)
T ss_pred hhcccccHHHHHHHHHHHHHHHHhcc-cccccCCCceEEEEccCCCcceeEEecccccccccCCCcchhhcccCCCCccc
Confidence 11111456788999999999999999 999999999999965 3 46899999999977643 23468999
Q ss_pred CCCccccccCCCCCCcceehhHHHHHHHhhC-CCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHHHHHHHHHhcccC
Q 014478 150 FTPPEYMRTGRVTPESVVYSFGTMLLDLLSG-KHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSE 228 (424)
Q Consensus 150 y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~d 228 (424)
|+|||++....-+...||+||||++|..++| ..||... ...+..+..-......-.+..-. +..+||.+|+.+|
T Consensus 680 W~APE~L~~~~~~~avDiFslGCvfyYvltgG~HpFGd~----~~R~~NIl~~~~~L~~L~~~~d~-eA~dLI~~ml~~d 754 (903)
T KOG1027|consen 680 WQAPEQLREDRKTQAVDIFSLGCVFYYVLTGGSHPFGDS----LERQANILTGNYTLVHLEPLPDC-EAKDLISRMLNPD 754 (903)
T ss_pred ccCHHHHhccccCcccchhhcCceEEEEecCCccCCCch----HHhhhhhhcCccceeeeccCchH-HHHHHHHHhcCCC
Confidence 9999999988888899999999999999988 5676653 11111111001111111111111 8899999999999
Q ss_pred cCCCCCHHHHHHH
Q 014478 229 ARERPNAKSLVIS 241 (424)
Q Consensus 229 p~~Rps~~~~~~~ 241 (424)
|..||++.+|+.|
T Consensus 755 P~~RPsa~~VL~H 767 (903)
T KOG1027|consen 755 PQLRPSATDVLNH 767 (903)
T ss_pred cccCCCHHHHhCC
Confidence 9999999999976
|
|
| >PLN03225 Serine/threonine-protein kinase SNT7; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=1e-31 Score=268.14 Aligned_cols=235 Identities=17% Similarity=0.194 Sum_probs=152.1
Q ss_pred CCCcccceeeee------cceecccccCCCchhhhHHHHHHHHHhcCCCcCcceeEEE------EEeCCeeeEEEecCCC
Q 014478 2 GGRCSKFSICWF------HCHLKSSVLESSDLGETLNLEEAKAVGNLRSERLANLIGC------CYEADERLLVAEFMPN 69 (424)
Q Consensus 2 G~~g~v~~~~~~------~~~v~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~------~~~~~~~~lv~e~~~~ 69 (424)
||||.||++.+. +..+++|++..... .+.+..| .++...+.+++.+... +..+...++||||+.+
T Consensus 143 G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~~-~e~~~~e--~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~LV~ey~~~ 219 (566)
T PLN03225 143 GAFGVVYKASLVNKQSKKEGKYVLKKATEYGA-VEIWMNE--RVRRACPNSCADFVYGFLEPVSSKKEDEYWLVWRYEGE 219 (566)
T ss_pred CCCeEEEEEEEcCCccccCcEEEEEEecccch-hHHHHHH--HHHhhchhhHHHHHHhhhcccccccCCceEEEEEecCC
Confidence 899999999984 45677776543221 1222222 1222222333222221 2455678999999999
Q ss_pred CCHHhHhccCCCCC-------------------CCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecC-CCCeEE
Q 014478 70 ETLAKHLFHWETQP-------------------MKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDK-DGNPRL 129 (424)
Q Consensus 70 gsL~~~l~~~~~~~-------------------l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~-~~~~kl 129 (424)
++|.+++.... .+ .....+..++.|++.||.|||+++ |+||||||+|||++. ++.+||
T Consensus 220 gsL~~~l~~~~-~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~~g-IiHRDLKP~NILl~~~~~~~KL 297 (566)
T PLN03225 220 STLADLMQSKE-FPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHSTG-IVHRDVKPQNIIFSEGSGSFKI 297 (566)
T ss_pred CcHHHHHHhcC-CchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHHCC-EEeCcCCHHHEEEeCCCCcEEE
Confidence 99999986421 11 112346689999999999999999 999999999999985 579999
Q ss_pred ccccccccCCCC-----CccccCccCCCccccccC----------------------CCCCCcceehhHHHHHHHhhCCC
Q 014478 130 SSFGLMKNSRDG-----KSYSTNLAFTPPEYMRTG----------------------RVTPESVVYSFGTMLLDLLSGKH 182 (424)
Q Consensus 130 ~Dfg~~~~~~~~-----~~~~gt~~y~aPE~~~~~----------------------~~~~~~Dv~slG~~l~el~~g~~ 182 (424)
+|||+++..... ....+|+.|||||.+... .++.++|||||||++|||+++..
T Consensus 298 ~DFGlA~~l~~~~~~~~~~~~~t~~Y~APE~~~~~~~~~~~~~~~~~~~~sp~l~~~~~~~k~DVwSlGviL~el~~~~~ 377 (566)
T PLN03225 298 IDLGAAADLRVGINYIPKEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQLNLPDRFDIYSAGLIFLQMAFPNL 377 (566)
T ss_pred EeCCCccccccccccCCcccccCCCccChHHhhccCCCCCCccccccccccchhccccCCCCcccHHHHHHHHHHHhCcC
Confidence 999999865422 345688999999976432 23446799999999999999764
Q ss_pred CCCchhhHHH---hhh-----hhhHhhhcccCCC------CCchhHHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 014478 183 IPPSHALDLI---RSK-----NFLLLMDSALEGH------FSNDEGTELVRLASRCLQSEARERPNAKSLVIS 241 (424)
Q Consensus 183 ~~~~~~~~~~---~~~-----~~~~~~~~~~~~~------~~~~~~~~l~~li~~cl~~dp~~Rps~~~~~~~ 241 (424)
++........ ... .+........... ..........+||.+||+.||.+|||+.++++|
T Consensus 378 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~dLi~~mL~~dP~kR~ta~e~L~H 450 (566)
T PLN03225 378 RSDSNLIQFNRQLKRNDYDLVAWRKLVEPRASPDLRRGFEVLDLDGGAGWELLKSMMRFKGRQRISAKAALAH 450 (566)
T ss_pred CCchHHHHHHHHHHhcCCcHHHHHHhhccccchhhhhhhhhccccchHHHHHHHHHccCCcccCCCHHHHhCC
Confidence 4332211110 000 0000111100000 000112345689999999999999999999865
|
|
| >KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=5.9e-32 Score=236.09 Aligned_cols=223 Identities=16% Similarity=0.210 Sum_probs=174.3
Q ss_pred ecceecccccCCCc---hhhhHHHHHHHHHhcCCCcCcceeEEEEEeCC------eeeEEEecCCCCCHHhHhccCCCCC
Q 014478 13 FHCHLKSSVLESSD---LGETLNLEEAKAVGNLRSERLANLIGCCYEAD------ERLLVAEFMPNETLAKHLFHWETQP 83 (424)
Q Consensus 13 ~~~~v~~~~~~~~~---~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~------~~~lv~e~~~~gsL~~~l~~~~~~~ 83 (424)
.+..|++|+....- ...++..+|..++..+.|+||++++.+|.-.. +.|+|||+|+. +|...+. -.
T Consensus 40 ~~~~v~ikk~~~pf~n~~~akra~rel~l~~~v~~~nii~l~n~ftP~~~l~~~~e~y~v~e~m~~-nl~~vi~----~e 114 (369)
T KOG0665|consen 40 LGRPVAIKKLSRPFQNQTHAKRAYRELKLMKCVNHKNIISLLNVFTPQKTLEEFQEVYLVMELMDA-NLCQVIL----ME 114 (369)
T ss_pred ccCceehhhhcCccccCccchhhhhhhhhhhhhcccceeeeeeccCccccHHHHHhHHHHHHhhhh-HHHHHHH----Hh
Confidence 56777777764332 23567788999999999999999999997653 47999999965 9999884 35
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCC---CccccCccCCCccccccCC
Q 014478 84 MKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG---KSYSTNLAFTPPEYMRTGR 160 (424)
Q Consensus 84 l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~---~~~~gt~~y~aPE~~~~~~ 160 (424)
++..++..++.|++.|++|||+.+ |+||||||+||++..+..+||.|||+++..... +....|..|.|||++.+..
T Consensus 115 lDH~tis~i~yq~~~~ik~lhs~~-IihRdLkPsnivv~~~~~lKi~dfg~ar~e~~~~~mtpyVvtRyyrapevil~~~ 193 (369)
T KOG0665|consen 115 LDHETISYILYQMLCGIKHLHSAG-IIHRDLKPSNIVVNSDCTLKILDFGLARTEDTDFMMTPYVVTRYYRAPEVILGMG 193 (369)
T ss_pred cchHHHHHHHHHHHHHHHHHHhcc-eeecccCcccceecchhheeeccchhhcccCcccccCchhheeeccCchheeccC
Confidence 788899999999999999999999 999999999999999999999999999876544 3456788999999999888
Q ss_pred CCCCcceehhHHHHHHHhhCCCCCCchh-hHHHhh--------------------hh------------hhHhhhc-ccC
Q 014478 161 VTPESVVYSFGTMLLDLLSGKHIPPSHA-LDLIRS--------------------KN------------FLLLMDS-ALE 206 (424)
Q Consensus 161 ~~~~~Dv~slG~~l~el~~g~~~~~~~~-~~~~~~--------------------~~------------~~~~~~~-~~~ 206 (424)
+.+.+||||+||++.||++|...|++.. .+.+.. .. +...... ..+
T Consensus 194 ~ke~vdiwSvGci~gEli~~~Vlf~g~d~idQ~~ki~~~lgtpd~~F~~qL~~~~r~yv~~~~~y~~~~f~~~fpD~~f~ 273 (369)
T KOG0665|consen 194 YKENVDIWSVGCIMGELILGTVLFPGKDHIDQWNKIIEQLGTPDPSFMKQLQPTVRNYVENRPQYQAISFSELFPDSLFP 273 (369)
T ss_pred CcccchhhhhhhHHHHHhhceEEecCchHHHHHHHHHHHhcCCCHHHHHHhhHHHHHHhhcChHhhccchhhhCCccccc
Confidence 9999999999999999999998887641 000100 00 0000000 000
Q ss_pred C--CCCchhHHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 014478 207 G--HFSNDEGTELVRLASRCLQSEARERPNAKSLVIS 241 (424)
Q Consensus 207 ~--~~~~~~~~~l~~li~~cl~~dp~~Rps~~~~~~~ 241 (424)
. ..+..-+..+++++.+||..||++|.|+++++.|
T Consensus 274 ~~~e~~~~~~~~ardll~~MLvi~pe~Risv~daL~H 310 (369)
T KOG0665|consen 274 VVLEGSKLDCSLARDLLSKMLVIDPEKRISVDDALRH 310 (369)
T ss_pred ccccCCccchHHHHHHHHHhhccChhhcccHHHHhcC
Confidence 0 0111234568999999999999999999999865
|
|
| >KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.5e-31 Score=219.69 Aligned_cols=185 Identities=15% Similarity=0.185 Sum_probs=150.2
Q ss_pred CCCccccee--eeecceecccccCC--CchhhhHHHHHHHHHhcC-CCcCcceeEEEEEeCCeeeEEEecCCCCCHHhHh
Q 014478 2 GGRCSKFSI--CWFHCHLKSSVLES--SDLGETLNLEEAKAVGNL-RSERLANLIGCCYEADERLLVAEFMPNETLAKHL 76 (424)
Q Consensus 2 G~~g~v~~~--~~~~~~v~~~~~~~--~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~l 76 (424)
|++|.|-+. ...+..+++|.+.. ..+..++.+.|+.+.++. ..|.+|.|||........+|.||.|+. ||..+-
T Consensus 57 GayG~vekmrh~~sg~imAvKri~~tvn~q~q~r~L~dldi~~r~~~CPf~V~FyGa~~regdvwIcME~M~t-Sldkfy 135 (282)
T KOG0984|consen 57 GAYGVVEKMRHIQSGTIMAVKRIRATVNSQEQKRLLMDLDIIMRTVDCPFTVHFYGALFREGDVWICMELMDT-SLDKFY 135 (282)
T ss_pred CccchhhheeeccCCeEEEEeeehhhcChHHHHHHHHhhhhhccCCCCCeEEEeehhhhccccEEEeHHHhhh-hHHHHH
Confidence 445555333 34677777776643 334456777888877666 799999999999888889999999976 887664
Q ss_pred ccC--CCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCC---CccccCccCC
Q 014478 77 FHW--ETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG---KSYSTNLAFT 151 (424)
Q Consensus 77 ~~~--~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~---~~~~gt~~y~ 151 (424)
.+. .++.+++.-+-+|+..|..||.|||++-.+||||+||+||||+.+|.+|+||||++-...++ +...|-..||
T Consensus 136 ~~v~~~g~~ipE~vlGkIa~Svv~al~~L~~kL~vIHRDvKPsNiLIn~~GqVKiCDFGIsG~L~dSiAkt~daGCkpYm 215 (282)
T KOG0984|consen 136 RKVLKKGGTIPEDVLGKIAVSVVHALEFLHSKLSVIHRDVKPSNILINYDGQVKICDFGISGYLVDSIAKTMDAGCKPYM 215 (282)
T ss_pred HHHHhcCCcCchHHhhHhHHHHHHHHHHHHHHhhhhhccCCcceEEEccCCcEEEcccccceeehhhhHHHHhcCCCccC
Confidence 321 46789999999999999999999999855999999999999999999999999998766554 2346778999
Q ss_pred CccccccC----CCCCCcceehhHHHHHHHhhCCCCCCch
Q 014478 152 PPEYMRTG----RVTPESVVYSFGTMLLDLLSGKHIPPSH 187 (424)
Q Consensus 152 aPE~~~~~----~~~~~~Dv~slG~~l~el~~g~~~~~~~ 187 (424)
|||.+..+ .|+.+|||||||+.+.||.+++.|++.+
T Consensus 216 aPEri~~e~n~~gY~vksDvWSLGItmiElA~lr~PY~~w 255 (282)
T KOG0984|consen 216 APERINPELNQKGYSVKSDVWSLGITMIEMAILRFPYESW 255 (282)
T ss_pred ChhhcCcccCcccceeehhhhhhhhhhhhhhhcccccccc
Confidence 99988743 5899999999999999999999887765
|
|
| >PLN03224 probable serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.3e-30 Score=254.02 Aligned_cols=239 Identities=14% Similarity=0.146 Sum_probs=166.2
Q ss_pred CCCcccceeee------------------ecceecccccCCCchh-hh--------------HHHHHHHHHhcCCCcCc-
Q 014478 2 GGRCSKFSICW------------------FHCHLKSSVLESSDLG-ET--------------LNLEEAKAVGNLRSERL- 47 (424)
Q Consensus 2 G~~g~v~~~~~------------------~~~~v~~~~~~~~~~~-~~--------------~~~~E~~~l~~l~h~~i- 47 (424)
||||.||++.+ .+..|++|++...... .+ .+..|+.++.+++|.++
T Consensus 156 GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~vE~~~l~~l~~~~l~ 235 (507)
T PLN03224 156 GNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGMVEAYMCAKIKRNPIA 235 (507)
T ss_pred CCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhHHHHHHHHHhhcccch
Confidence 89999999875 2245677776433221 22 33447777777766554
Q ss_pred ----ceeEEEEEe--------CCeeeEEEecCCCCCHHhHhccCC----------------------CCCCCHHHHHHHH
Q 014478 48 ----ANLIGCCYE--------ADERLLVAEFMPNETLAKHLFHWE----------------------TQPMKWAMRLRVA 93 (424)
Q Consensus 48 ----v~~~~~~~~--------~~~~~lv~e~~~~gsL~~~l~~~~----------------------~~~l~~~~~~~i~ 93 (424)
++++++|.. ....++||||+++|+|.+++.... ...+++..+..++
T Consensus 236 ~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~~~~~~~~~~~~~i~ 315 (507)
T PLN03224 236 AASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDNMPQDKRDINVIKGVM 315 (507)
T ss_pred hhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhhcccccCCHHHHHHHH
Confidence 677787753 346799999999999999885311 1124567889999
Q ss_pred HHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCCCc-----cccCccCCCccccccCCC-------
Q 014478 94 LYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKS-----YSTNLAFTPPEYMRTGRV------- 161 (424)
Q Consensus 94 ~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~~~-----~~gt~~y~aPE~~~~~~~------- 161 (424)
.|++.+|.|||+++ |+||||||+|||++.++.+||+|||+++....... ..+|+.|+|||.+.....
T Consensus 316 ~ql~~aL~~lH~~~-ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~g~~tp~Y~aPE~l~~~~~~~~~~~~ 394 (507)
T PLN03224 316 RQVLTGLRKLHRIG-IVHRDIKPENLLVTVDGQVKIIDFGAAVDMCTGINFNPLYGMLDPRYSPPEELVMPQSCPRAPAP 394 (507)
T ss_pred HHHHHHHHHHHHCC-eecCCCchHhEEECCCCcEEEEeCcCccccccCCccCccccCCCcceeChhhhcCCCCCCccchh
Confidence 99999999999999 99999999999999999999999999876443221 234789999998864321
Q ss_pred ---------------CCCcceehhHHHHHHHhhCCC-CCCchh--hHHHhh-----hhhhHhhhcccCCCCCchhHHHHH
Q 014478 162 ---------------TPESVVYSFGTMLLDLLSGKH-IPPSHA--LDLIRS-----KNFLLLMDSALEGHFSNDEGTELV 218 (424)
Q Consensus 162 ---------------~~~~Dv~slG~~l~el~~g~~-~~~~~~--~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~l~ 218 (424)
..+.||||+||++++|++|.. |+.... ...... ..+................++...
T Consensus 395 ~~~~~l~~~~~~yg~~~~~DvwSlGvil~em~~~~l~p~~~~~~f~~~~~~~~~~~~~~r~~~~~~~~~~~~d~~s~~~~ 474 (507)
T PLN03224 395 AMAALLSPFAWLYGRPDLFDSYTAGVLLMQMCVPELRPVANIRLFNTELRQYDNDLNRWRMYKGQKYDFSLLDRNKEAGW 474 (507)
T ss_pred hhhhhhhhhHHhcCCCCccchhhHHHHHHHHHhCCCCCccchhhhhhHHhhccchHHHHHhhcccCCCcccccccChHHH
Confidence 124799999999999999874 332110 000000 001111111111122334678899
Q ss_pred HHHHHhcccCc---CCCCCHHHHHHH
Q 014478 219 RLASRCLQSEA---RERPNAKSLVIS 241 (424)
Q Consensus 219 ~li~~cl~~dp---~~Rps~~~~~~~ 241 (424)
+++.++|..+| .+|+|+++++.|
T Consensus 475 dLi~~LL~~~~~~~~~RlSa~eaL~H 500 (507)
T PLN03224 475 DLACKLITKRDQANRGRLSVGQALSH 500 (507)
T ss_pred HHHHHHhccCCCCcccCCCHHHHhCC
Confidence 99999999876 689999999876
|
|
| >KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=7e-32 Score=230.65 Aligned_cols=237 Identities=16% Similarity=0.211 Sum_probs=179.9
Q ss_pred CCCcccceeee--ecceecccccCCCc---hhhhHHHHHHHHHhcCCCcCcceeEEEEEeCC-----eeeEEEecCCCCC
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESSD---LGETLNLEEAKAVGNLRSERLANLIGCCYEAD-----ERLLVAEFMPNET 71 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~~---~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-----~~~lv~e~~~~gs 71 (424)
|.||.||.+.+ .+..++.+++.... ...+++++|+++|..++|.|++..+++..-.+ ++|+|+|++.. +
T Consensus 64 GAFGVVWsVTDPRdgrrvalkK~pnvfq~L~s~krvFre~kmLcfFkHdNVLSaLDILQPph~dfFqEiYV~TELmQS-D 142 (449)
T KOG0664|consen 64 GAFGVVWSVTDPRSGKRVALKKMPNVFQNLASCKRVFREIKMLSSFRHDNVLSLLDILQPANPSFFQELYVLTELMQS-D 142 (449)
T ss_pred cceeEEEeccCCCCccchhHhhcchHHHHHHHHHHHHHHHHHHHhhccccHHHHHHhcCCCCchHHHHHHHHHHHHHh-h
Confidence 78888888877 56777777775433 34678999999999999999999988876543 57899999954 8
Q ss_pred HHhHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCCCcc-----cc
Q 014478 72 LAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSY-----ST 146 (424)
Q Consensus 72 L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~~~~-----~g 146 (424)
|...|.+ .+.++...+.-++.||++||+|||+.+ |+||||||.|.|++.|-.+||||||+++........ ..
T Consensus 143 LHKIIVS--PQ~Ls~DHvKVFlYQILRGLKYLHsA~-ILHRDIKPGNLLVNSNCvLKICDFGLARvee~d~~~hMTqEVV 219 (449)
T KOG0664|consen 143 LHKIIVS--PQALTPDHVKVFVYQILRGLKYLHTAN-ILHRDIKPGNLLVNSNCILKICDFGLARTWDQRDRLNMTHEVV 219 (449)
T ss_pred hhheecc--CCCCCcchhhhhHHHHHhhhHHHhhcc-hhhccCCCccEEeccCceEEecccccccccchhhhhhhHHHHH
Confidence 9888864 778999999999999999999999999 999999999999999999999999999976644322 34
Q ss_pred CccCCCccccccC-CCCCCcceehhHHHHHHHhhCCCCCCchh--------hHH------------HhhhhhhHhhhccc
Q 014478 147 NLAFTPPEYMRTG-RVTPESVVYSFGTMLLDLLSGKHIPPSHA--------LDL------------IRSKNFLLLMDSAL 205 (424)
Q Consensus 147 t~~y~aPE~~~~~-~~~~~~Dv~slG~~l~el~~g~~~~~~~~--------~~~------------~~~~~~~~~~~~~~ 205 (424)
|-.|.|||.+++. .|+...||||.||++.|++..+..|.... .+. .+......+.....
T Consensus 220 TQYYRAPEiLMGaRhYs~AvDiWSVGCIFaELLgRrILFQAq~PiqQL~lItdLLGTPs~EaMr~ACEGAk~H~LR~~~k 299 (449)
T KOG0664|consen 220 TQYYRAPELLMGARRYTGAVDIWSVGCIFAELLQRKILFQAAGPIEQLQMIIDLLGTPSQEAMKYACEGAKNHVLRAGLR 299 (449)
T ss_pred HHHhccHHHhhcchhhcCccceehhhHHHHHHHhhhhhhhccChHHHHHHHHHHhCCCcHHHHHHHhhhhHHHhhccCCC
Confidence 7899999999975 58999999999999999998776654321 000 00111111111111
Q ss_pred CCCC--------CchhHHHHHHHHHHhcccCcCCCCCHHHHHHHH
Q 014478 206 EGHF--------SNDEGTELVRLASRCLQSEARERPNAKSLVISL 242 (424)
Q Consensus 206 ~~~~--------~~~~~~~l~~li~~cl~~dp~~Rps~~~~~~~l 242 (424)
.... +..-..+...++.+++..||.+|.+..+.+.++
T Consensus 300 ~Ps~~vLYtlsS~~~~~heav~~~~~~l~~d~dkris~~~A~~~~ 344 (449)
T KOG0664|consen 300 APDTQRLYKIASPDDKNHEAVDLLQKLLHFDPDKRISVEEALQHR 344 (449)
T ss_pred CCCccceeeecCCcccchHHHHHHHHHhCCCCcccccHhhhcccc
Confidence 1111 111234567888899999999999999988764
|
|
| >cd00180 PKc Catalytic domain of Protein Kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.4e-29 Score=222.79 Aligned_cols=201 Identities=25% Similarity=0.345 Sum_probs=178.3
Q ss_pred CCCcccceeeee--cceecccccCCCch--hhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHhHhc
Q 014478 2 GGRCSKFSICWF--HCHLKSSVLESSDL--GETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLF 77 (424)
Q Consensus 2 G~~g~v~~~~~~--~~~v~~~~~~~~~~--~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~ 77 (424)
|++|.||.+... +..+.+|++..... ..+.+.+|++.++.++|++|+++++++......+++||+++|++|.+++.
T Consensus 4 g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~ 83 (215)
T cd00180 4 GGFGTVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKLNHPNIVKLYGVFEDENHLYLVMEYCEGGSLKDLLK 83 (215)
T ss_pred CCceEEEEEEecCCCcEEEEEEeccccchhHHHHHHHHHHHHHhcCCCCeeeEeeeeecCCeEEEEEecCCCCcHHHHHH
Confidence 788999999986 67778787766654 25789999999999999999999999999889999999999999999986
Q ss_pred cCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecC-CCCeEEccccccccCCCC----CccccCccCCC
Q 014478 78 HWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDK-DGNPRLSSFGLMKNSRDG----KSYSTNLAFTP 152 (424)
Q Consensus 78 ~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~-~~~~kl~Dfg~~~~~~~~----~~~~gt~~y~a 152 (424)
.. ...+++..++.++.+++.+|.+||+++ ++|+||+|.||+++. ++.++|+|||.+...... ....+...|++
T Consensus 84 ~~-~~~~~~~~~~~~~~~l~~~l~~lh~~~-~~H~dl~~~ni~~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (215)
T cd00180 84 EN-EGKLSEDEILRILLQILEGLEYLHSNG-IIHRDLKPENILLDSDNGKVKLADFGLSKLLTSDKSLLKTIVGTPAYMA 161 (215)
T ss_pred hc-cCCCCHHHHHHHHHHHHHHHHHHHhCC-eeccCCCHhhEEEeCCCCcEEEecCCceEEccCCcchhhcccCCCCccC
Confidence 42 146899999999999999999999999 999999999999998 899999999998866543 33457789999
Q ss_pred ccccccC-CCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHHHHHHHHHhcccCcCC
Q 014478 153 PEYMRTG-RVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARE 231 (424)
Q Consensus 153 PE~~~~~-~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~ 231 (424)
||.+... ..+.++|+|++|+++++| ..+.+++.+|+..||++
T Consensus 162 pe~~~~~~~~~~~~D~~~lg~~~~~l-------------------------------------~~~~~~l~~~l~~~p~~ 204 (215)
T cd00180 162 PEVLLGKGYYSEKSDIWSLGVILYEL-------------------------------------PELKDLIRKMLQKDPEK 204 (215)
T ss_pred hhHhcccCCCCchhhhHHHHHHHHHH-------------------------------------HHHHHHHHHHhhCCccc
Confidence 9999877 788899999999999998 57899999999999999
Q ss_pred CCCHHHHHHH
Q 014478 232 RPNAKSLVIS 241 (424)
Q Consensus 232 Rps~~~~~~~ 241 (424)
||++.+++++
T Consensus 205 R~~~~~l~~~ 214 (215)
T cd00180 205 RPSAKEILEH 214 (215)
T ss_pred CcCHHHHhhC
Confidence 9999999864
|
Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which |
| >KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=99.96 E-value=5.9e-31 Score=242.83 Aligned_cols=184 Identities=17% Similarity=0.164 Sum_probs=159.8
Q ss_pred CCCcccceeee--ecceecccccCCCchhhhHHHHHHHHHhcCC------CcCcceeEEEEEeCCeeeEEEecCCCCCHH
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESSDLGETLNLEEAKAVGNLR------SERLANLIGCCYEADERLLVAEFMPNETLA 73 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~~~~~~~~~~E~~~l~~l~------h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~ 73 (424)
|-|++|+++.+ .+..||+|++...+...+.-+.|+++|++|+ --|+++++..|...+++|||+|-+. .+|.
T Consensus 443 GvFs~Vvra~D~~r~~~vAiKIIRnNE~M~KtGl~EleiLkKL~~AD~Edk~Hclrl~r~F~hknHLClVFE~Ls-lNLR 521 (752)
T KOG0670|consen 443 GVFSTVVRARDQARGQEVAIKIIRNNEVMHKTGLKELEILKKLNDADPEDKFHCLRLFRHFKHKNHLCLVFEPLS-LNLR 521 (752)
T ss_pred ceeeeeeeccccCCCCeeEEEEeecchHHhhhhhHHHHHHHHhhccCchhhhHHHHHHHHhhhcceeEEEehhhh-chHH
Confidence 55677777766 5668999999999888888899999999995 3589999999999999999999985 4999
Q ss_pred hHhccCC-CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCC-CeEEccccccccCCCC--CccccCcc
Q 014478 74 KHLFHWE-TQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDG-NPRLSSFGLMKNSRDG--KSYSTNLA 149 (424)
Q Consensus 74 ~~l~~~~-~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~-~~kl~Dfg~~~~~~~~--~~~~gt~~ 149 (424)
++|++-+ .-+|....+..++.|+.-||..|...+ |+|.||||+|||++... .+||||||.|...... +....+..
T Consensus 522 evLKKyG~nvGL~ikaVRsYaqQLflALklLK~c~-vlHaDIKPDNiLVNE~k~iLKLCDfGSA~~~~eneitPYLVSRF 600 (752)
T KOG0670|consen 522 EVLKKYGRNVGLHIKAVRSYAQQLFLALKLLKKCG-VLHADIKPDNILVNESKNILKLCDFGSASFASENEITPYLVSRF 600 (752)
T ss_pred HHHHHhCcccceeehHHHHHHHHHHHHHHHHHhcC-eeecccCccceEeccCcceeeeccCccccccccccccHHHHHHh
Confidence 9997532 336778899999999999999999999 99999999999997654 6899999998876644 34456788
Q ss_pred CCCccccccCCCCCCcceehhHHHHHHHhhCCCCCCch
Q 014478 150 FTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSH 187 (424)
Q Consensus 150 y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~ 187 (424)
|.|||.+.|.+|+...|+||.||.||||.||+..||+.
T Consensus 601 YRaPEIiLG~~yd~~iD~WSvgctLYElYtGkIlFpG~ 638 (752)
T KOG0670|consen 601 YRAPEIILGLPYDYPIDTWSVGCTLYELYTGKILFPGR 638 (752)
T ss_pred ccCcceeecCcccCCccceeeceeeEEeeccceecCCC
Confidence 99999999999999999999999999999999999875
|
|
| >KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=8.1e-31 Score=248.51 Aligned_cols=233 Identities=16% Similarity=0.193 Sum_probs=185.7
Q ss_pred CCCcccceeee--ecceecccccCCC-chhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHhHhcc
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESS-DLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFH 78 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~ 78 (424)
|.+|.||++.+ .+.-.++|+++-. .....-..+|+-+++..+|||||.++|.+..+...+++||||.||+|.+.-+
T Consensus 26 gTygdvyKaRd~~s~elaavkvVkLep~dd~~~iqqei~~~~dc~h~nivay~gsylr~dklwicMEycgggslQdiy~- 104 (829)
T KOG0576|consen 26 GTYGDVYKARDKRSGELAAVKVVKLEPGDDFSGIQQEIGMLRDCRHPNIVAYFGSYLRRDKLWICMEYCGGGSLQDIYH- 104 (829)
T ss_pred CcccchhhhcccccCchhhheeeeccCCccccccccceeeeecCCCcChHHHHhhhhhhcCcEEEEEecCCCcccceee-
Confidence 77899999987 3444444444322 2235566789999999999999999999999999999999999999999764
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCC----CCccccCccCCCcc
Q 014478 79 WETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRD----GKSYSTNLAFTPPE 154 (424)
Q Consensus 79 ~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~----~~~~~gt~~y~aPE 154 (424)
..+++++.++..+++..+.||+|||+++ -+|||||..|||+++.|.+|++|||.+-.+.. ..++.||+.|||||
T Consensus 105 -~TgplselqiayvcRetl~gl~ylhs~g-k~hRdiKGanilltd~gDvklaDfgvsaqitati~KrksfiGtpywmapE 182 (829)
T KOG0576|consen 105 -VTGPLSELQIAYVCRETLQGLKYLHSQG-KIHRDIKGANILLTDEGDVKLADFGVSAQITATIAKRKSFIGTPYWMAPE 182 (829)
T ss_pred -ecccchhHHHHHHHhhhhccchhhhcCC-cccccccccceeecccCceeecccCchhhhhhhhhhhhcccCCccccchh
Confidence 3678999999999999999999999999 99999999999999999999999998776553 46788999999999
Q ss_pred ccc---cCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhcccC---CCCCchhHHHHHHHHHHhcccC
Q 014478 155 YMR---TGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALE---GHFSNDEGTELVRLASRCLQSE 228 (424)
Q Consensus 155 ~~~---~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~l~~li~~cl~~d 228 (424)
+.. .+.|...+|||++|+...|+--.++|. ++ ....+.........+. ..-+...++.+.+|++.||.++
T Consensus 183 vaaverkggynqlcdiwa~gitAiel~eLqppl-fd---lhpmr~l~LmTkS~~qpp~lkDk~kws~~fh~fvK~altkn 258 (829)
T KOG0576|consen 183 VAAVERKGGYNQLCDIWALGITAIELGELQPPL-FD---LHPMRALFLMTKSGFQPPTLKDKTKWSEFFHNFVKGALTKN 258 (829)
T ss_pred HHHHHhcccccccccccccccchhhhhhcCCcc-cc---cchHHHHHHhhccCCCCCcccCCccchHHHHHHHHHHhcCC
Confidence 874 467999999999999999997766432 21 1222222222222221 1223457889999999999999
Q ss_pred cCCCCCHHHHHHH
Q 014478 229 ARERPNAKSLVIS 241 (424)
Q Consensus 229 p~~Rps~~~~~~~ 241 (424)
|.+||+++.++.+
T Consensus 259 pKkRptaeklL~h 271 (829)
T KOG0576|consen 259 PKKRPTAEKLLQH 271 (829)
T ss_pred CccCCChhhheec
Confidence 9999999988764
|
|
| >PLN00181 protein SPA1-RELATED; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.6e-30 Score=270.60 Aligned_cols=193 Identities=16% Similarity=0.160 Sum_probs=141.5
Q ss_pred hcCCC-cCcceeEEEE-------EeCCeeeEEEecCCCCCHHhHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCccc
Q 014478 40 GNLRS-ERLANLIGCC-------YEADERLLVAEFMPNETLAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALY 111 (424)
Q Consensus 40 ~~l~h-~~iv~~~~~~-------~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH 111 (424)
+.++| +||++++++| .....++++||++ +++|.+++.. ....+++.+++.++.||+.||.|||+++ |+|
T Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~-~~~L~~~l~~-~~~~~~~~~~~~i~~qi~~al~~lH~~g-IvH 103 (793)
T PLN00181 27 KSLSHIDYVRSLLGSHKEGNLDGLDDDSIVRALECE-DVSLRQWLDN-PDRSVDAFECFHVFRQIVEIVNAAHSQG-IVV 103 (793)
T ss_pred chhhHHHHHHHhhcccCCccccccccchhhhhhccC-CccHHHHHhc-ccccccHHHHHHHHHHHHHHHHHHHhCC-eee
Confidence 34556 6888888887 2334567888988 5599999964 3456999999999999999999999999 999
Q ss_pred ccCCCCCeeecC-------------------CCCeEEccccccccCCCC--------------------CccccCccCCC
Q 014478 112 HDLNAYRILFDK-------------------DGNPRLSSFGLMKNSRDG--------------------KSYSTNLAFTP 152 (424)
Q Consensus 112 ~dikp~Nill~~-------------------~~~~kl~Dfg~~~~~~~~--------------------~~~~gt~~y~a 152 (424)
|||||+||||+. ++.+|++|||+++..... ....||+.|||
T Consensus 104 rDlKP~NiLl~~~~~~k~~d~~~~~~~~~~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~A 183 (793)
T PLN00181 104 HNVRPSCFVMSSFNHVSFIESASCSDSGSDEDATTKSREIGSSRREEILSERRIEKLEEVKKQPFPMKQILAMEMSWYTS 183 (793)
T ss_pred ccCCchhEEEcccCcEEEeeccccCcccccccCcccccccccccccccccccchhhhhccccCCCcccccccCCCcceEC
Confidence 999999999954 445677777776542110 01246888999
Q ss_pred ccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHHHHHHHHHhcccCcCCC
Q 014478 153 PEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARER 232 (424)
Q Consensus 153 PE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~R 232 (424)
||++.+..++.++|||||||++|||++|..|+..... ... ........... ....+....++.+||..||.+|
T Consensus 184 PE~~~~~~~~~~sDVwSlGviL~ELl~~~~~~~~~~~-~~~-----~~~~~~~~~~~-~~~~~~~~~~~~~~L~~~P~~R 256 (793)
T PLN00181 184 PEEDNGSSSNCASDVYRLGVLLFELFCPVSSREEKSR-TMS-----SLRHRVLPPQI-LLNWPKEASFCLWLLHPEPSCR 256 (793)
T ss_pred hhhhccCCCCchhhhhhHHHHHHHHhhCCCchhhHHH-HHH-----HHHHhhcChhh-hhcCHHHHHHHHHhCCCChhhC
Confidence 9999988999999999999999999998755432210 110 01001111111 1123456789999999999999
Q ss_pred CCHHHHHHHH
Q 014478 233 PNAKSLVISL 242 (424)
Q Consensus 233 ps~~~~~~~l 242 (424)
|++.+++++-
T Consensus 257 ps~~eil~h~ 266 (793)
T PLN00181 257 PSMSELLQSE 266 (793)
T ss_pred cChHHHhhch
Confidence 9999998763
|
|
| >KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription] | Back alignment and domain information |
|---|
Probab=99.96 E-value=7.4e-30 Score=212.98 Aligned_cols=232 Identities=19% Similarity=0.238 Sum_probs=177.4
Q ss_pred CCCcccceeee--ecceecccccCCCchhhhHHHHHHHHHhcCC-CcCcceeEEEEEeCC--eeeEEEecCCCCCHHhHh
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESSDLGETLNLEEAKAVGNLR-SERLANLIGCCYEAD--ERLLVAEFMPNETLAKHL 76 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~--~~~lv~e~~~~gsL~~~l 76 (424)
|-++.||.+.. .+..+.+|++++.. .+.+.+|+++|..|. ||||+.++++..+.. .+.+|+||+.+.+...+-
T Consensus 49 GKYSEVFeg~~~~~~eK~ViKiLKPVk--kkKIkREikIL~nL~gg~NIi~L~DiV~Dp~SktpaLiFE~v~n~Dfk~ly 126 (338)
T KOG0668|consen 49 GKYSEVFEGINITNNEKCVIKILKPVK--KKKIKREIKILQNLRGGPNIIKLLDIVKDPESKTPSLIFEYVNNTDFKQLY 126 (338)
T ss_pred ccHhhHhcccccCCCceEEEeeechHH--HHHHHHHHHHHHhccCCCCeeehhhhhcCccccCchhHhhhhccccHHHHh
Confidence 45677888874 55556666666554 566889999999996 999999999987753 467999999998877654
Q ss_pred ccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCC-CeEEccccccccCCCCCcc---ccCccCCC
Q 014478 77 FHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDG-NPRLSSFGLMKNSRDGKSY---STNLAFTP 152 (424)
Q Consensus 77 ~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~-~~kl~Dfg~~~~~~~~~~~---~gt~~y~a 152 (424)
+.++...+..++.+++.||.|+|++| |+|||+||.|++||... .++|+|+|++.+..++... ..+..|--
T Consensus 127 -----~tl~d~dIryY~~elLkALdyCHS~G-ImHRDVKPhNvmIdh~~rkLrlIDWGLAEFYHp~~eYnVRVASRyfKG 200 (338)
T KOG0668|consen 127 -----PTLTDYDIRYYIYELLKALDYCHSMG-IMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKG 200 (338)
T ss_pred -----hhhchhhHHHHHHHHHHHHhHHHhcC-cccccCCcceeeechhhceeeeeecchHhhcCCCceeeeeeehhhcCC
Confidence 45788899999999999999999999 99999999999998654 5999999999987766543 45678889
Q ss_pred ccccccC-CCCCCcceehhHHHHHHHhhCCCCCCchhhH---HHhh---------------------hhhhHhhhcc---
Q 014478 153 PEYMRTG-RVTPESVVYSFGTMLLDLLSGKHIPPSHALD---LIRS---------------------KNFLLLMDSA--- 204 (424)
Q Consensus 153 PE~~~~~-~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~---~~~~---------------------~~~~~~~~~~--- 204 (424)
||.+-.- .|+.+-|+|||||++..|+..+.||.....+ .... ..+..++...
T Consensus 201 PELLVdy~~YDYSLD~WS~GcmlA~miFrkepFFhG~dN~DQLVkIakVLGt~el~~Yl~KY~i~Ldp~~~~i~~~~~rk 280 (338)
T KOG0668|consen 201 PELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVKIAKVLGTDELYAYLNKYQIDLDPQFEDILGRHSRK 280 (338)
T ss_pred chheeechhccccHHHHHHHHHHHHHHhccCcccCCCCCHHHHHHHHHHhChHHHHHHHHHHccCCChhHhhHhhccccc
Confidence 9988754 5888999999999999999999887643100 0000 0011111111
Q ss_pred -----cCCCCCchhHHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 014478 205 -----LEGHFSNDEGTELVRLASRCLQSEARERPNAKSLVIS 241 (424)
Q Consensus 205 -----~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~~~~~ 241 (424)
....-....+++..+|+.+.|..|.++|+|++|.+.+
T Consensus 281 ~w~~Fi~~~n~hl~~peaiDlldklLrYDHqeRlTakEam~H 322 (338)
T KOG0668|consen 281 PWSRFINSENQHLVSPEAIDLLDKLLRYDHQERLTAKEAMAH 322 (338)
T ss_pred cHHHhCCccccccCChHHHHHHHHHHhhccccccchHHHhcC
Confidence 1111111246899999999999999999999999876
|
|
| >smart00750 KIND kinase non-catalytic C-lobe domain | Back alignment and domain information |
|---|
Probab=99.96 E-value=4.5e-29 Score=213.98 Aligned_cols=168 Identities=18% Similarity=0.122 Sum_probs=129.6
Q ss_pred CCHHhHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCCCccccCcc
Q 014478 70 ETLAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLA 149 (424)
Q Consensus 70 gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~gt~~ 149 (424)
|||.+++.. .+.++++.+++.++.||+.||.|||+++ ||+|||++.++.+|+ ||+++...... ..||+.
T Consensus 1 GsL~~~l~~-~~~~l~~~~~~~i~~qi~~~L~~lH~~~-------kp~Nil~~~~~~~~~--fG~~~~~~~~~-~~g~~~ 69 (176)
T smart00750 1 VSLADILEV-RGRPLNEEEIWAVCLQCLRALRELHRQA-------KSGNILLTWDGLLKL--DGSVAFKTPEQ-SRVDPY 69 (176)
T ss_pred CcHHHHHHH-hCCCCCHHHHHHHHHHHHHHHHHHHhcC-------CcccEeEcCccceee--ccceEeecccc-CCCccc
Confidence 689999964 3567999999999999999999999987 999999999999999 99988765433 368899
Q ss_pred CCCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhcccCC--CCCchhHH--HHHHHHHHhc
Q 014478 150 FTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEG--HFSNDEGT--ELVRLASRCL 225 (424)
Q Consensus 150 y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~--~l~~li~~cl 225 (424)
|||||++.+..++.++|||||||++|||++|+.||....................... ..+...+. ++.+++.+||
T Consensus 70 y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~cl 149 (176)
T smart00750 70 FMAPEVIQGQSYTEKADIYSLGITLYEALDYELPYNEERELSAILEILLNGMPADDPRDRSNLESVSAARSFADFMRVCA 149 (176)
T ss_pred ccChHHhcCCCCcchhhHHHHHHHHHHHHhCCCCccccchhcHHHHHHHHHhccCCccccccHHHHHhhhhHHHHHHHHH
Confidence 9999999999999999999999999999999988754311101111111111111000 11223344 6999999999
Q ss_pred ccCcCCCCCHHHHHHHHHHHhhh
Q 014478 226 QSEARERPNAKSLVISLMSLQKE 248 (424)
Q Consensus 226 ~~dp~~Rps~~~~~~~l~~~~~~ 248 (424)
..||.+||++.++++++.....+
T Consensus 150 ~~~p~~Rp~~~~ll~~~~~~~~~ 172 (176)
T smart00750 150 SRLPQRREAANHYLAHCRALFAE 172 (176)
T ss_pred hcccccccCHHHHHHHHHHHHHH
Confidence 99999999999999998876543
|
It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features |
| >KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.6e-29 Score=219.84 Aligned_cols=206 Identities=15% Similarity=0.288 Sum_probs=169.6
Q ss_pred CCCchhhhHHHHHHHHHhcC-CCcCcceeEEEEEeCCeeeEEEecCCCCCHHhHhccCCCCCCCHHHHHHHHHHHHHHHH
Q 014478 23 ESSDLGETLNLEEAKAVGNL-RSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQPMKWAMRLRVALYLAQALE 101 (424)
Q Consensus 23 ~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~ 101 (424)
...+++.+....|-.+..+- +||.+|-++..|.....+++|.||++||+|--.+++ .+.++++.+.-+...|+-||.
T Consensus 288 ~nddedidwvqtek~vfe~asn~pflvglhscfqtesrlffvieyv~ggdlmfhmqr--qrklpeeharfys~ei~lal~ 365 (593)
T KOG0695|consen 288 VNDDEDIDWVQTEKHVFEQASNNPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQR--QRKLPEEHARFYSAEICLALN 365 (593)
T ss_pred cCCcccchhHHhhHHHHHhccCCCeEEehhhhhcccceEEEEEEEecCcceeeehhh--hhcCcHHHhhhhhHHHHHHHH
Confidence 34455566666677777776 799999999999999999999999999999776653 567999999999999999999
Q ss_pred HHHhCCCcccccCCCCCeeecCCCCeEEccccccccCC----CCCccccCccCCCccccccCCCCCCcceehhHHHHHHH
Q 014478 102 YCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSR----DGKSYSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDL 177 (424)
Q Consensus 102 ~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~----~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el 177 (424)
|||++| ||+||||.+|+|+|..|++||+|+|.++..- ...+++||+.|.|||.+.+..|....|.|+||++++||
T Consensus 366 flh~rg-iiyrdlkldnvlldaeghikltdygmcke~l~~gd~tstfcgtpnyiapeilrgeeygfsvdwwalgvlmfem 444 (593)
T KOG0695|consen 366 FLHERG-IIYRDLKLDNVLLDAEGHIKLTDYGMCKEGLGPGDTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEM 444 (593)
T ss_pred HHhhcC-eeeeeccccceEEccCCceeecccchhhcCCCCCcccccccCCCcccchhhhcccccCceehHHHHHHHHHHH
Confidence 999999 9999999999999999999999999998643 33568999999999999999999999999999999999
Q ss_pred hhCCCCCCchhhH----HHhhhhhhHhhhcccCCCCCchhHHHHHHHHHHhcccCcCCCC
Q 014478 178 LSGKHIPPSHALD----LIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERP 233 (424)
Q Consensus 178 ~~g~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rp 233 (424)
+.|+.||.--..+ ..+...+..++...+ .+|..++.....+++.-|.+||.+|.
T Consensus 445 magrspfdivgm~n~d~ntedylfqvilekqi--riprslsvkas~vlkgflnkdp~erl 502 (593)
T KOG0695|consen 445 MAGRSPFDIVGMDNPDMNTEDYLFQVILEKQI--RIPRSLSVKASHVLKGFLNKDPKERL 502 (593)
T ss_pred HcCCCCcceecCCCcccchhHHHHHHHhhhcc--cccceeehhhHHHHHHhhcCCcHHhc
Confidence 9999988642211 122222222333322 35666778888999999999999984
|
|
| >KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.95 E-value=4.3e-29 Score=213.58 Aligned_cols=239 Identities=16% Similarity=0.218 Sum_probs=196.7
Q ss_pred CCcccceeeeecceecccccCCCc---hhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHhHhccC
Q 014478 3 GRCSKFSICWFHCHLKSSVLESSD---LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHW 79 (424)
Q Consensus 3 ~~g~v~~~~~~~~~v~~~~~~~~~---~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~ 79 (424)
-+|..+++.|.+..+.++++...+ .....|..|.-.|+-+.||||+.++|.|....++.+|..||+.|||..++...
T Consensus 202 hsgelwrgrwqgndivakil~vr~~t~risrdfneefp~lrifshpnilpvlgacnsppnlv~isq~mp~gslynvlhe~ 281 (448)
T KOG0195|consen 202 HSGELWRGRWQGNDIVAKILNVREVTARISRDFNEEFPALRIFSHPNILPVLGACNSPPNLVIISQYMPFGSLYNVLHEQ 281 (448)
T ss_pred CCcccccccccCcchhhhhhhhhhcchhhcchhhhhCcceeeecCCchhhhhhhccCCCCceEeeeeccchHHHHHHhcC
Confidence 368899999999998888875433 34568999999999999999999999999999999999999999999999876
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccc-cCCCCCeeecCCCCeEEccccccccCCCCCccccCccCCCcccccc
Q 014478 80 ETQPMKWAMRLRVALYLAQALEYCSSKGRALYH-DLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLAFTPPEYMRT 158 (424)
Q Consensus 80 ~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~-dikp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~gt~~y~aPE~~~~ 158 (424)
.+-.++..++++++.++++|++|||+..|++-| .|.+..+++|++.+++|+ .+-.++..+.....-.+.||+||.++.
T Consensus 282 t~vvvd~sqav~faldiargmaflhslep~ipr~~lns~hvmidedltaris-mad~kfsfqe~gr~y~pawmspealqr 360 (448)
T KOG0195|consen 282 TSVVVDHSQAVRFALDIARGMAFLHSLEPMIPRFYLNSKHVMIDEDLTARIS-MADTKFSFQEVGRAYSPAWMSPEALQR 360 (448)
T ss_pred ccEEEecchHHHHHHHHHhhHHHHhhcchhhhhhhcccceEEecchhhhhee-cccceeeeeccccccCcccCCHHHHhc
Confidence 666788899999999999999999998777766 789999999999888765 333333333334445789999999987
Q ss_pred CCCC---CCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHHHHHHHHHhcccCcCCCCCH
Q 014478 159 GRVT---PESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERPNA 235 (424)
Q Consensus 159 ~~~~---~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~ 235 (424)
.+-+ ..+|+|||++++||+.|...||...+ ..+--.++.-..++..+|+..+..+..++.-|+..||.+||.+
T Consensus 361 kped~n~raadmwsfaillwel~trevpfadls----pmecgmkialeglrv~ippgis~hm~klm~icmnedpgkrpkf 436 (448)
T KOG0195|consen 361 KPEDLNIRAADMWSFAILLWELNTREVPFADLS----PMECGMKIALEGLRVHIPPGISRHMNKLMNICMNEDPGKRPKF 436 (448)
T ss_pred CchhcchhhhhHHHHHHHHHHhhccccccccCC----chhhhhhhhhccccccCCCCccHHHHHHHHHHhcCCCCcCCCc
Confidence 6533 37899999999999999999887642 1222233444567778899999999999999999999999999
Q ss_pred HHHHHHHHHHh
Q 014478 236 KSLVISLMSLQ 246 (424)
Q Consensus 236 ~~~~~~l~~~~ 246 (424)
..++-.|++++
T Consensus 437 dmivpilekm~ 447 (448)
T KOG0195|consen 437 DMIVPILEKMI 447 (448)
T ss_pred ceehhhHHHhc
Confidence 99998888764
|
|
| >KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.2e-28 Score=224.50 Aligned_cols=120 Identities=14% Similarity=0.136 Sum_probs=103.5
Q ss_pred CCCcccceeee--ecceecccccCCCchhhhHHHHHHHHHhcCC-----C---cCcceeEEEEEe----CCeeeEEEecC
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESSDLGETLNLEEAKAVGNLR-----S---ERLANLIGCCYE----ADERLLVAEFM 67 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~~~~~~~~~~E~~~l~~l~-----h---~~iv~~~~~~~~----~~~~~lv~e~~ 67 (424)
|=|.+||.+++ ..+.||.|+.+....-.+..+.||++|++++ | .+||++++.|.. +.++|||+|++
T Consensus 89 GHFSTVWLawDtq~~r~VAlKVvKSAqhYtEaAlDEIklL~~v~~~Dp~~~~~~~VV~LlD~FkhsGpNG~HVCMVfEvL 168 (590)
T KOG1290|consen 89 GHFSTVWLAWDTQNKRYVALKVVKSAQHYTEAALDEIKLLQQVREGDPNDPGKKCVVQLLDHFKHSGPNGQHVCMVFEVL 168 (590)
T ss_pred cccceeEEEeeccCCeEEEEEEEehhhHHHHHHHHHHHHHHHHHhcCCCCCCCceeeeeeccceecCCCCcEEEEEehhh
Confidence 55677777766 4567888888888888888999999999993 3 259999999975 45799999999
Q ss_pred CCCCHHhHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeec
Q 014478 68 PNETLAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFD 122 (424)
Q Consensus 68 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~ 122 (424)
|.+|..+|....-++++...+.+|++||+.||.|||.+..|||-||||+|||+.
T Consensus 169 -GdnLLklI~~s~YrGlpl~~VK~I~~qvL~GLdYLH~ecgIIHTDlKPENvLl~ 222 (590)
T KOG1290|consen 169 -GDNLLKLIKYSNYRGLPLSCVKEICRQVLTGLDYLHRECGIIHTDLKPENVLLC 222 (590)
T ss_pred -hhHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHHHHhcCccccCCCcceeeee
Confidence 779999998777789999999999999999999999985599999999999994
|
|
| >KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.95 E-value=2e-28 Score=228.79 Aligned_cols=182 Identities=12% Similarity=0.157 Sum_probs=152.8
Q ss_pred CCCcccceeeeecc--eecccccCCCchhhh---------HHHHHHHHHhcCC---CcCcceeEEEEEeCCeeeEEEec-
Q 014478 2 GGRCSKFSICWFHC--HLKSSVLESSDLGET---------LNLEEAKAVGNLR---SERLANLIGCCYEADERLLVAEF- 66 (424)
Q Consensus 2 G~~g~v~~~~~~~~--~v~~~~~~~~~~~~~---------~~~~E~~~l~~l~---h~~iv~~~~~~~~~~~~~lv~e~- 66 (424)
|++|.|..+++... .|.+|.+.+...-.+ ..-.|+++|..|+ |+||++++++|++++..||+||-
T Consensus 572 GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKlLdfFEddd~yyl~te~h 651 (772)
T KOG1152|consen 572 GAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKLLDFFEDDDYYYLETEVH 651 (772)
T ss_pred cccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhhhheeecCCeeEEEecCC
Confidence 77888888887443 344455544433222 2234999999996 99999999999999999999996
Q ss_pred CCCCCHHhHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCC--Ccc
Q 014478 67 MPNETLAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG--KSY 144 (424)
Q Consensus 67 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~--~~~ 144 (424)
-+|-+|.++|.. ...+++.++..|++||+.|+++||+.+ |||||||-+|+.++.+|-+||+|||.+.....+ ..+
T Consensus 652 g~gIDLFd~IE~--kp~m~E~eAk~IFkQV~agi~hlh~~~-ivhrdikdenvivd~~g~~klidfgsaa~~ksgpfd~f 728 (772)
T KOG1152|consen 652 GEGIDLFDFIEF--KPRMDEPEAKLIFKQVVAGIKHLHDQG-IVHRDIKDENVIVDSNGFVKLIDFGSAAYTKSGPFDVF 728 (772)
T ss_pred CCCcchhhhhhc--cCccchHHHHHHHHHHHhccccccccC-ceecccccccEEEecCCeEEEeeccchhhhcCCCccee
Confidence 467799999964 668999999999999999999999999 999999999999999999999999988665544 567
Q ss_pred ccCccCCCccccccCCC-CCCcceehhHHHHHHHhhCCCCCCc
Q 014478 145 STNLAFTPPEYMRTGRV-TPESVVYSFGTMLLDLLSGKHIPPS 186 (424)
Q Consensus 145 ~gt~~y~aPE~~~~~~~-~~~~Dv~slG~~l~el~~g~~~~~~ 186 (424)
.||..|.|||++.+.+| ...-|||++|++||.++....|++.
T Consensus 729 ~gtv~~aapevl~g~~y~gk~qdiwalgillytivykenpyyn 771 (772)
T KOG1152|consen 729 VGTVDYAAPEVLGGEKYLGKPQDIWALGILLYTIVYKENPYYN 771 (772)
T ss_pred eeeccccchhhhCCCccCCCcchhhhhhheeeEEEeccCCCcC
Confidence 89999999999998886 5678999999999999988877653
|
|
| >smart00221 STYKc Protein kinase; unclassified specificity | Back alignment and domain information |
|---|
Probab=99.95 E-value=5.4e-27 Score=208.82 Aligned_cols=182 Identities=21% Similarity=0.221 Sum_probs=159.3
Q ss_pred CCCcccceeeee--cceecccccCCCch--hhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHhHhc
Q 014478 2 GGRCSKFSICWF--HCHLKSSVLESSDL--GETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLF 77 (424)
Q Consensus 2 G~~g~v~~~~~~--~~~v~~~~~~~~~~--~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~ 77 (424)
|++|.||.+... +..+++|.+..... ..+.+.+|++.++.++|+|++++++++......++++|++++++|.+++.
T Consensus 10 g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~ 89 (225)
T smart00221 10 GAFGKVYLARDKGTGELVAVKVLKKEKTEKQREEFLREIRILKKLKHPNIVKLYGVFEDPEPLYLVMEYCEGGDLFDYLR 89 (225)
T ss_pred CCCeEEEEEEEcCCCcEEEEEeeccccchHHHHHHHHHHHHHHhCCCCChhhheeeeecCCceEEEEeccCCCCHHHHHH
Confidence 788999999884 46677777765543 46788899999999999999999999998888999999999999999986
Q ss_pred cCCCCC-CCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCC-----CccccCccCC
Q 014478 78 HWETQP-MKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG-----KSYSTNLAFT 151 (424)
Q Consensus 78 ~~~~~~-l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~-----~~~~gt~~y~ 151 (424)
.. .. +++..+..++.+++.+|.+||+.+ ++|+||+|+||+++.++.++|+|||++...... ....++..|+
T Consensus 90 ~~--~~~~~~~~~~~~~~~l~~~l~~lh~~~-i~h~di~~~ni~v~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~~ 166 (225)
T smart00221 90 KK--GGKLSEEEARFYLRQILEALEYLHSLG-IVHRDLKPENILLGMDGLVKLADFGLARFIHRDLAALLKTVKGTPFYL 166 (225)
T ss_pred hc--ccCCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCCHHHEEEcCCCCEEEeeCceeeEecCcccccccceeccCCcC
Confidence 42 23 899999999999999999999999 999999999999999999999999998876544 3456778899
Q ss_pred Ccccc-ccCCCCCCcceehhHHHHHHHhhCCCCCCc
Q 014478 152 PPEYM-RTGRVTPESVVYSFGTMLLDLLSGKHIPPS 186 (424)
Q Consensus 152 aPE~~-~~~~~~~~~Dv~slG~~l~el~~g~~~~~~ 186 (424)
+||.+ ....++.++|+||||+++++|++|+.||+.
T Consensus 167 ~pe~~~~~~~~~~~~Dv~~lG~~~~~l~~g~~pf~~ 202 (225)
T smart00221 167 APEVLLGGKGYGEAVDIWSLGVILYELLWGPEPFSG 202 (225)
T ss_pred CHhHhcCCCCCCchhhHHHHHHHHHHHHHCCCCccc
Confidence 99998 556788899999999999999999988865
|
Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase. |
| >KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.95 E-value=8e-28 Score=205.66 Aligned_cols=234 Identities=18% Similarity=0.177 Sum_probs=171.3
Q ss_pred CCCcccceeeee--cceecccccCCCchhhhHHHHHHHHHhcC-CCcCcceeEEE-EEeCCeeeEEEecCCCCCHHhHhc
Q 014478 2 GGRCSKFSICWF--HCHLKSSVLESSDLGETLNLEEAKAVGNL-RSERLANLIGC-CYEADERLLVAEFMPNETLAKHLF 77 (424)
Q Consensus 2 G~~g~v~~~~~~--~~~v~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~-~~~~~~~~lv~e~~~~gsL~~~l~ 77 (424)
|.||.+..+.+. ...++.|.+........+|.+|..---.| .|.||+.-|++ |...+..+++|||+|.|+|..-+
T Consensus 35 G~FgkIlL~eHr~s~t~ivlKavp~p~tt~~dF~rEfhY~~~Ls~H~hIi~tY~vaFqt~d~YvF~qE~aP~gdL~snv- 113 (378)
T KOG1345|consen 35 GRFGKILLAEHRQSKTRIVLKAVPRPQTTQADFVREFHYSFFLSPHQHIIDTYEVAFQTSDAYVFVQEFAPRGDLRSNV- 113 (378)
T ss_pred cceeeEEeeeccCCceEEEeeccCcchhhHHHHHHHhccceeeccchhhhHHHHHHhhcCceEEEeeccCccchhhhhc-
Confidence 667777777663 34466666666666788999999876667 58999998876 55566677999999999999988
Q ss_pred cCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeee-c-CCCCeEEccccccccCCCCCcc-ccCccCCCcc
Q 014478 78 HWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILF-D-KDGNPRLSSFGLMKNSRDGKSY-STNLAFTPPE 154 (424)
Q Consensus 78 ~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill-~-~~~~~kl~Dfg~~~~~~~~~~~-~gt~~y~aPE 154 (424)
+..++-+....+++.|+++||.|||+++ +||||||.+|||| + +..++||||||+.+..+..... .-+..|.+||
T Consensus 114 --~~~GigE~~~K~v~~ql~SAi~fMHskn-lVHRdlK~eNiLif~~df~rvKlcDFG~t~k~g~tV~~~~~~~~y~~pe 190 (378)
T KOG1345|consen 114 --EAAGIGEANTKKVFAQLLSAIEFMHSKN-LVHRDLKAENILIFDADFYRVKLCDFGLTRKVGTTVKYLEYVNNYHAPE 190 (378)
T ss_pred --CcccccHHHHHHHHHHHHHHHHHhhccc-hhhcccccceEEEecCCccEEEeeecccccccCceehhhhhhcccCCcH
Confidence 4567889999999999999999999999 9999999999999 3 3347999999998766544332 3467799999
Q ss_pred cccc---C--CCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhcccCCCCC---chhHHHHHHHHHHhcc
Q 014478 155 YMRT---G--RVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFS---NDEGTELVRLASRCLQ 226 (424)
Q Consensus 155 ~~~~---~--~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~l~~li~~cl~ 226 (424)
.... + ...+.+|||.||++++.++||..||.......-.--.+... ........| ...++.+..+.++-|.
T Consensus 191 ~~~~~~ne~~~~~ps~D~WqfGIi~f~cltG~~PWQka~~~d~~Y~~~~~w-~~rk~~~~P~~F~~fs~~a~r~Fkk~lt 269 (378)
T KOG1345|consen 191 LCDTVVNEKLVVNPSTDIWQFGIIFFYCLTGKFPWQKASIMDKPYWEWEQW-LKRKNPALPKKFNPFSEKALRLFKKSLT 269 (378)
T ss_pred HHhhccccceEecccccchheeeeeeeeecCCCcchhhhccCchHHHHHHH-hcccCccCchhhcccCHHHHHHHHHhcC
Confidence 7642 2 36788999999999999999997765332111111111111 111111222 2357788999999999
Q ss_pred cCcCCCCCHHHHHH
Q 014478 227 SEARERPNAKSLVI 240 (424)
Q Consensus 227 ~dp~~Rps~~~~~~ 240 (424)
.++++|--..++.+
T Consensus 270 ~~~~drcki~~~kk 283 (378)
T KOG1345|consen 270 PRFKDRCKIWTAKK 283 (378)
T ss_pred CcccccchhHHHHH
Confidence 99999944444443
|
|
| >KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair] | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.2e-25 Score=203.72 Aligned_cols=233 Identities=21% Similarity=0.253 Sum_probs=176.2
Q ss_pred CCCcccceeeee-----cceecccccCCCchhhhHHHHHHHHHhcC-CCcCcceeEEEEEeCCeeeEEEecCCCCCHHhH
Q 014478 2 GGRCSKFSICWF-----HCHLKSSVLESSDLGETLNLEEAKAVGNL-RSERLANLIGCCYEADERLLVAEFMPNETLAKH 75 (424)
Q Consensus 2 G~~g~v~~~~~~-----~~~v~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~ 75 (424)
|.|++||++... +..|+.|.+.... ...+...|+++|..+ .+.||+.+.+++..++...+|+||++..+..++
T Consensus 47 GsFssv~~a~~~~~~~~~~~valk~i~~ts-~p~ri~~El~~L~~~gG~~ni~~~~~~~rnnd~v~ivlp~~~H~~f~~l 125 (418)
T KOG1167|consen 47 GSFSSVYKATDIEQDTKRRYVALKAIYRTS-SPSRILNELEMLYRLGGSDNIIKLNGCFRNNDQVAIVLPYFEHDRFRDL 125 (418)
T ss_pred cchhhhhhhhHhhhccccceEeeeeccccc-CchHHHHHHHHHHHhccchhhhcchhhhccCCeeEEEecccCccCHHHH
Confidence 889999998763 3456666554333 346788999999999 699999999999999999999999999999998
Q ss_pred hccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecC-CCCeEEccccccccCC---------------
Q 014478 76 LFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDK-DGNPRLSSFGLMKNSR--------------- 139 (424)
Q Consensus 76 l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~-~~~~kl~Dfg~~~~~~--------------- 139 (424)
.. .++..++..+++.+..||.++|.+| ||||||||+|+|.+. -+.-.|.|||++....
T Consensus 126 ~~-----~l~~~~i~~Yl~~ll~Al~~~h~~G-IvHRDiKpsNFL~n~~t~rg~LvDFgLA~~~d~~~~~~~s~~~~~~~ 199 (418)
T KOG1167|consen 126 YR-----SLSLAEIRWYLRNLLKALAHLHKNG-IVHRDIKPSNFLYNRRTQRGVLVDFGLAQRYDGYQQTEHSRSYSGRH 199 (418)
T ss_pred Hh-----cCCHHHHHHHHHHHHHHhhhhhccC-ccccCCCccccccccccCCceEEechhHHHHHhhhhhhhhhhhhccc
Confidence 84 3678999999999999999999999 999999999999964 4567899999987210
Q ss_pred --C--C-----------------------------CccccCccCCCcccccc-CCCCCCcceehhHHHHHHHhhCCCCCC
Q 014478 140 --D--G-----------------------------KSYSTNLAFTPPEYMRT-GRVTPESVVYSFGTMLLDLLSGKHIPP 185 (424)
Q Consensus 140 --~--~-----------------------------~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slG~~l~el~~g~~~~~ 185 (424)
+ + ....||++|.|||++.. +..++++||||.|++++.++++..||.
T Consensus 200 ~~~~~g~~~~~~~~~~~~~p~g~~~~~~~~r~~~~anrAGT~GfRaPEvL~k~~~QttaiDiws~GVI~Lslls~~~PFf 279 (418)
T KOG1167|consen 200 ATPAMGKDVHCQSVATASKPAGYYRRCNDGRPSERANRAGTPGFRAPEVLFRCPRQTTAIDIWSAGVILLSLLSRRYPFF 279 (418)
T ss_pred CCccccCcccccccccccCCCCceeccCCCccceecccCCCCCCCchHHHhhccCcCCccceeeccceeehhhccccccc
Confidence 0 0 01237899999999875 457889999999999999999998876
Q ss_pred chhhH--------------HHhh------h-------h----------hhHh-hhcc--------cCCCCCchhHHHHHH
Q 014478 186 SHALD--------------LIRS------K-------N----------FLLL-MDSA--------LEGHFSNDEGTELVR 219 (424)
Q Consensus 186 ~~~~~--------------~~~~------~-------~----------~~~~-~~~~--------~~~~~~~~~~~~l~~ 219 (424)
....+ .+++ . . +..+ .... .........+..+.+
T Consensus 280 ~a~dd~~al~ei~tifG~~~mrk~A~l~g~~~l~~ksn~~~~~e~~~~f~s~~~~~~~~~~q~n~~~~~~~d~~~~~~~d 359 (418)
T KOG1167|consen 280 KAKDDADALAEIATIFGSAEMRKCAALPGRILLWQKSNIPTIPELRVNFETLHIESIYKSRQPNTEREIGSDVFPALLLD 359 (418)
T ss_pred cCccccchHHHHHHHhChHHHHHHhhcCCceeeeccccccccHHHHhchhccChhhcccccccceeeccccccccHHHHH
Confidence 32100 0000 0 0 0000 0000 011111223457899
Q ss_pred HHHHhcccCcCCCCCHHHHHHH
Q 014478 220 LASRCLQSEARERPNAKSLVIS 241 (424)
Q Consensus 220 li~~cl~~dp~~Rps~~~~~~~ 241 (424)
++++||..||.+|.|+++.+.|
T Consensus 360 lLdk~le~np~kRitAEeALkH 381 (418)
T KOG1167|consen 360 LLDKCLELNPQKRITAEDALKH 381 (418)
T ss_pred HHHHHccCChhhcccHHHHhcC
Confidence 9999999999999999999875
|
|
| >KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.91 E-value=2.5e-23 Score=195.21 Aligned_cols=244 Identities=15% Similarity=0.130 Sum_probs=185.3
Q ss_pred CCCcccceeeeecc---eecccccCCCchh-hhHHHHHHHHHhcCCC----cCcceeEEEE-EeCCeeeEEEecCCCCCH
Q 014478 2 GGRCSKFSICWFHC---HLKSSVLESSDLG-ETLNLEEAKAVGNLRS----ERLANLIGCC-YEADERLLVAEFMPNETL 72 (424)
Q Consensus 2 G~~g~v~~~~~~~~---~v~~~~~~~~~~~-~~~~~~E~~~l~~l~h----~~iv~~~~~~-~~~~~~~lv~e~~~~gsL 72 (424)
||||.||.+..... .+++|+....... ...+..|..++..+.. ++++.+++.+ ..+...+|||+.+ |.+|
T Consensus 29 G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~~~~l~~E~~vl~~l~~~~~~~~~~~~~~~G~~~~~~~~iVM~l~-G~sL 107 (322)
T KOG1164|consen 29 GGFGAVYLVSDKSEKNKEYAKKLEKKELGSKPSVLKIEIQVLKKLEKKNGPSHFPKLLDHGRSTEDFNFIVMSLL-GPSL 107 (322)
T ss_pred cCCceEEEEEecCCCCeeEEEEEEEecccCCCccchhHHHHHHHHhhhcCCCCCCEEEEeccCCCceeEEEEecc-CccH
Confidence 89999999987553 3444443332211 2267789999999963 6899999999 4777889999999 8899
Q ss_pred HhHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCC-----CCeEEccccccccCC--------
Q 014478 73 AKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKD-----GNPRLSSFGLMKNSR-------- 139 (424)
Q Consensus 73 ~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~-----~~~kl~Dfg~~~~~~-------- 139 (424)
.++......+.++..++++++.|++.+|++||+.| ++||||||+|+++... ..+.|.|||+++...
T Consensus 108 ~dl~~~~~~~~fs~~T~l~ia~q~l~~l~~lH~~G-~iHRDiKp~N~~~g~~~~~~~~~~~llDfGlar~~~~~~~~~~~ 186 (322)
T KOG1164|consen 108 EDLRKRNPPGRFSRKTVLRIAIQNLNALEDLHSKG-FIHRDIKPENFVVGQSSRSEVRTLYLLDFGLARRFKYVGDSGGN 186 (322)
T ss_pred HHHHHhCCCCCcCHhHHHHHHHHHHHHHHHHHhcC-cccCCcCHHHeeecCCCCcccceEEEEecCCCccccccCCCCcc
Confidence 99886545578999999999999999999999999 9999999999999755 358999999998211
Q ss_pred --CC----CccccCccCCCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhcccCCCCCchh
Q 014478 140 --DG----KSYSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDE 213 (424)
Q Consensus 140 --~~----~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 213 (424)
.. ....||..|+++.+..+...+.+.|+||++.++.+++.|..||....... ....+................
T Consensus 187 ~~~~r~~~~~~rGT~ry~S~~~H~~~e~~r~DDles~~Y~l~el~~g~LPW~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 265 (322)
T KOG1164|consen 187 LRPPRPQKGLFRGTLRYASINVHLGIEQGRRDDLESLFYMLLELLKGSLPWEALEMTD-LKSKFEKDPRKLLTDRFGDLK 265 (322)
T ss_pred cccCCCCccCCCCccccccHHHhCCCccCCchhhhhHHHHHHHHhcCCCCCccccccc-hHHHHHHHhhhhccccccCCC
Confidence 11 12459999999999999999999999999999999999997765432111 111111111111111123345
Q ss_pred HHHHHHHHHHhcccCcCCCCCHHHHHHHHHHHhhh
Q 014478 214 GTELVRLASRCLQSEARERPNAKSLVISLMSLQKE 248 (424)
Q Consensus 214 ~~~l~~li~~cl~~dp~~Rps~~~~~~~l~~~~~~ 248 (424)
+.++..+...+-..+...+|....+...++.....
T Consensus 266 ~~~~~~~~~~~~~~~~~~~Pdy~~~~~~l~~~~~~ 300 (322)
T KOG1164|consen 266 PEEFAKILEYIDSLDYEDKPDYEKLAELLKDVFDS 300 (322)
T ss_pred hHHHHHHHHHhhccCCcCCCCHHHHHHHHHHHHHh
Confidence 67888888888889999999999999998877665
|
|
| >PRK09188 serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.88 E-value=1.4e-22 Score=189.77 Aligned_cols=144 Identities=15% Similarity=0.060 Sum_probs=112.0
Q ss_pred CCCcccceeeee---cceecccccCCC------chhhhHHHHHHHHHhcCCCcCcce-eEEEEEeCCeeeEEEecCCCCC
Q 014478 2 GGRCSKFSICWF---HCHLKSSVLESS------DLGETLNLEEAKAVGNLRSERLAN-LIGCCYEADERLLVAEFMPNET 71 (424)
Q Consensus 2 G~~g~v~~~~~~---~~~v~~~~~~~~------~~~~~~~~~E~~~l~~l~h~~iv~-~~~~~~~~~~~~lv~e~~~~gs 71 (424)
|+||.||++.+. +..+++|++... ......|.+|+++|++++|+||+. +++. ...+|||||++|++
T Consensus 29 G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~iv~~l~~~----~~~~LVmE~~~G~~ 104 (365)
T PRK09188 29 DVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGVVPQLLAT----GKDGLVRGWTEGVP 104 (365)
T ss_pred cCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCCCCCcEEEEc----CCcEEEEEccCCCC
Confidence 899999999873 455677664322 223567899999999999999885 4432 45799999999999
Q ss_pred HHhHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccC-CCCCeeecCCCCeEEccccccccCCCCC--------
Q 014478 72 LAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDL-NAYRILFDKDGNPRLSSFGLMKNSRDGK-------- 142 (424)
Q Consensus 72 L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~di-kp~Nill~~~~~~kl~Dfg~~~~~~~~~-------- 142 (424)
|.. +.. .. ...++.|++.+|.|||+++ |+|||| ||+|||++.++.+||+|||+++......
T Consensus 105 L~~-~~~-----~~---~~~~~~~i~~aL~~lH~~g-IiHrDL~KP~NILv~~~~~ikLiDFGlA~~~~~~~~~~~~~~~ 174 (365)
T PRK09188 105 LHL-ARP-----HG---DPAWFRSAHRALRDLHRAG-ITHNDLAKPQNWLMGPDGEAAVIDFQLASVFRRRGALYRIAAY 174 (365)
T ss_pred HHH-hCc-----cc---hHHHHHHHHHHHHHHHHCC-CeeCCCCCcceEEEcCCCCEEEEECccceecccCcchhhhhhh
Confidence 973 211 11 1467899999999999999 999999 9999999999999999999998654321
Q ss_pred ----ccccCccCCCccccccC
Q 014478 143 ----SYSTNLAFTPPEYMRTG 159 (424)
Q Consensus 143 ----~~~gt~~y~aPE~~~~~ 159 (424)
...++..|++||.+...
T Consensus 175 ~d~~~~~~~~~~~~pe~~~~~ 195 (365)
T PRK09188 175 EDLRHLLKHKRTYAPDALTPR 195 (365)
T ss_pred hhhhhhhccCccCCcccCChh
Confidence 23467789999998743
|
|
| >KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.88 E-value=1.3e-22 Score=193.16 Aligned_cols=208 Identities=20% Similarity=0.305 Sum_probs=163.4
Q ss_pred HhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHhHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCC
Q 014478 39 VGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYR 118 (424)
Q Consensus 39 l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~N 118 (424)
|+.+.|.|+.+|+|.+.++...++|.+||..|+|.+.+.. ....+++.....++++|+.||.|+|...-..|+.+++.|
T Consensus 1 l~~l~h~n~~~f~g~~~~~~~~~~i~~~c~rGsl~D~i~~-~~~~~d~~F~~s~~rdi~~Gl~ylh~s~i~~hg~l~s~n 79 (484)
T KOG1023|consen 1 LRQLDHDNLNKFIGASVDGPEMIVIWEYCSRGSLLDILSN-EDIKLDYFFILSFIRDISKGLAYLHNSPIGYHGALKSSN 79 (484)
T ss_pred CcccchhhhhhheeeEecCCceEEEEeeecCccHHhHHhc-cccCccHHHHHHHHHHHHHHHHHHhcCcceeeeeecccc
Confidence 4678999999999999999999999999999999999976 567889999999999999999999998623999999999
Q ss_pred eeecCCCCeEEccccccccCCC------CCccccCccCCCccccccCC-------CCCCcceehhHHHHHHHhhCCCCCC
Q 014478 119 ILFDKDGNPRLSSFGLMKNSRD------GKSYSTNLAFTPPEYMRTGR-------VTPESVVYSFGTMLLDLLSGKHIPP 185 (424)
Q Consensus 119 ill~~~~~~kl~Dfg~~~~~~~------~~~~~gt~~y~aPE~~~~~~-------~~~~~Dv~slG~~l~el~~g~~~~~ 185 (424)
++++..+.+||+|||+...... .........|.|||.+.+.. .+.+.||||||++++|+++.+.||.
T Consensus 80 Clvd~~w~lklt~~Gl~~~~~~~~~~~~~~~~~~~~lw~aPellr~~~~~~~~~~~~~~gdiYs~~ii~~ei~~r~~~~~ 159 (484)
T KOG1023|consen 80 CLVDSRWVLKLTDFGLNSLLEETAEPEAHHPIRKALLWTAPELLRGALSQSLESALTQKGDIYSFGIIMYEILFRSGPFD 159 (484)
T ss_pred ceeeeeEEEEechhhhcccccccccccccchhHHHHhccCHHHhcccccccccccccccCCeehHHHHHHHHHhccCccc
Confidence 9999999999999999776632 11222346799999998631 4668999999999999999999887
Q ss_pred chhhHHHhhhhhhHhhh---cccCCCCC-c-hhHHHHHHHHHHhcccCcCCCCCHHHHHHHHHHHhh
Q 014478 186 SHALDLIRSKNFLLLMD---SALEGHFS-N-DEGTELVRLASRCLQSEARERPNAKSLVISLMSLQK 247 (424)
Q Consensus 186 ~~~~~~~~~~~~~~~~~---~~~~~~~~-~-~~~~~l~~li~~cl~~dp~~Rps~~~~~~~l~~~~~ 247 (424)
.........+.+..+.+ ...++... . ..++++..++..||..+|.+||+++.+...+..+..
T Consensus 160 ~~~~~~~~~eii~~~~~~~~~~~rP~i~~~~e~~~~l~~l~~~cw~e~P~~rPs~~~i~~~~~~~~~ 226 (484)
T KOG1023|consen 160 LRNLVEDPDEIILRVKKGGSNPFRPSIELLNELPPELLLLVARCWEEIPEKRPSIEQIRSKLLTINK 226 (484)
T ss_pred cccccCChHHHHHHHHhcCCCCcCcchhhhhhcchHHHHHHHHhcccChhhCccHHHHHhhhhhhcc
Confidence 64322222222222211 11121111 1 345579999999999999999999999887766544
|
|
| >COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
Probab=99.88 E-value=1.7e-21 Score=183.57 Aligned_cols=237 Identities=20% Similarity=0.221 Sum_probs=179.9
Q ss_pred CCCcccceeeeecceecccccCCCch----hhhHHHHHHHHHhcCCCc-CcceeEEEEEeCCeeeEEEecCCCCCHHhHh
Q 014478 2 GGRCSKFSICWFHCHLKSSVLESSDL----GETLNLEEAKAVGNLRSE-RLANLIGCCYEADERLLVAEFMPNETLAKHL 76 (424)
Q Consensus 2 G~~g~v~~~~~~~~~v~~~~~~~~~~----~~~~~~~E~~~l~~l~h~-~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~l 76 (424)
|++|.||.+.+. ..++++.+..... ....|.+|+.++..+.|+ +|+++.+.+......+++++++.+++|.+++
T Consensus 11 g~~~~v~~~~~~-~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 89 (384)
T COG0515 11 GSFGEVYLARDR-KLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKLYDFFQDEGSLYLVMEYVDGGSLEDLL 89 (384)
T ss_pred CCCeEEEEEEec-cEEEEEeechhhccchhHHHHHHHHHHHHHHccCCcceeeEEEEEecCCEEEEEEecCCCCcHHHHH
Confidence 778888887776 4445555543332 366889999999999888 7999999997777789999999999999777
Q ss_pred ccCCC-CCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCC-CeEEccccccccCCC----------CCcc
Q 014478 77 FHWET-QPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDG-NPRLSSFGLMKNSRD----------GKSY 144 (424)
Q Consensus 77 ~~~~~-~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~-~~kl~Dfg~~~~~~~----------~~~~ 144 (424)
..... ..++......++.|++.++.|+|+.+ ++|||+||+||+++..+ .++++|||+++.... ....
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~H~~~-~~hrd~kp~nil~~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~ 168 (384)
T COG0515 90 KKIGRKGPLSESEALFILAQILSALEYLHSKG-IIHRDIKPENILLDRDGRVVKLIDFGLAKLLPDPGSTSSIPALPSTS 168 (384)
T ss_pred HhcccccCCCHHHHHHHHHHHHHHHHHHHhCC-eeccCCCHHHeeecCCCCeEEEeccCcceecCCCCcccccccccccc
Confidence 54211 26899999999999999999999999 99999999999999988 699999999875432 2445
Q ss_pred ccCccCCCcccccc---CCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhccc----CCCCCch----h
Q 014478 145 STNLAFTPPEYMRT---GRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSAL----EGHFSND----E 213 (424)
Q Consensus 145 ~gt~~y~aPE~~~~---~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~----~ 213 (424)
.||..|++||.+.+ ...+...|+||+|++++++++|..|+...... .........+.... ....... .
T Consensus 169 ~~t~~~~~pe~~~~~~~~~~~~~~D~~s~g~~~~~~~~~~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (384)
T COG0515 169 VGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNS-SATSQTLKIILELPTPSLASPLSPSNPELI 247 (384)
T ss_pred ccccccCCHHHhcCCCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCcc-ccHHHHHHHHHhcCCcccccccCccccchh
Confidence 78999999999987 57888999999999999999999885543210 00011111111111 1111111 1
Q ss_pred HHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 014478 214 GTELVRLASRCLQSEARERPNAKSLVIS 241 (424)
Q Consensus 214 ~~~l~~li~~cl~~dp~~Rps~~~~~~~ 241 (424)
...+.+++.+|+..+|..|.+..+....
T Consensus 248 ~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 275 (384)
T COG0515 248 SKAASDLLKKLLAKDPKNRLSSSSDLSH 275 (384)
T ss_pred hHHHHHHHHHHHhcCchhcCCHHHHhhc
Confidence 3578999999999999999988877765
|
|
| >KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.88 E-value=1.3e-23 Score=209.51 Aligned_cols=206 Identities=15% Similarity=0.090 Sum_probs=160.5
Q ss_pred HHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHhHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCccc
Q 014478 32 NLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALY 111 (424)
Q Consensus 32 ~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH 111 (424)
+..|+-+-..|.|||++..+..+.+.....-+||||++ +|..++.+ ...++..++-.+++|++.|+.|||+.| +.|
T Consensus 368 i~sE~~i~~~l~h~~~~e~l~~~~~~~~~~~~mE~~~~-Dlf~~~~~--~~~~~~~e~~c~fKqL~~Gv~y~h~~G-iah 443 (601)
T KOG0590|consen 368 ITSEFCIGSSLSHPNIIETLDIVQEIDGILQSMEYCPY-DLFSLVMS--NGKLTPLEADCFFKQLLRGVKYLHSMG-LAH 443 (601)
T ss_pred hhhheeecccccCCchhhhHHHHhhcccchhhhhcccH-HHHHHHhc--ccccchhhhhHHHHHHHHHHHHHHhcC-cee
Confidence 45677778888999998888887776666666999999 99999964 347889999999999999999999999 999
Q ss_pred ccCCCCCeeecCCCCeEEccccccccCCCC--------CccccCccCCCccccccCCCCC-CcceehhHHHHHHHhhCCC
Q 014478 112 HDLNAYRILFDKDGNPRLSSFGLMKNSRDG--------KSYSTNLAFTPPEYMRTGRVTP-ESVVYSFGTMLLDLLSGKH 182 (424)
Q Consensus 112 ~dikp~Nill~~~~~~kl~Dfg~~~~~~~~--------~~~~gt~~y~aPE~~~~~~~~~-~~Dv~slG~~l~el~~g~~ 182 (424)
||+|++|+++..+|.+||+|||.+....-. ....|+..|+|||++.+..|++ ..||||.|+++..|++|+.
T Consensus 444 rdlK~enll~~~~g~lki~Dfg~~~vf~~~~e~~~~~~~g~~gS~pY~apE~~~~~~ydpr~vDiwS~~ii~~~m~~~~~ 523 (601)
T KOG0590|consen 444 RDLKLENLLVTENGILKIIDFGAASVFRYPWEKNIHESSGIVGSDPYLAPEVLTGKEYDPRAVDVWSCGIIYICMILGRF 523 (601)
T ss_pred ccCccccEEEecCCceEEeecCcceeeccCcchhhhhhcCcccCCcCcCcccccccccCcchhhhhhccceEEEEecCCC
Confidence 999999999999999999999987654321 2346889999999999999977 5799999999999999996
Q ss_pred CCCchhhHHH---hhhhhhHhhhcccCCCCCchhHHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 014478 183 IPPSHALDLI---RSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERPNAKSLVIS 241 (424)
Q Consensus 183 ~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~~~~~ 241 (424)
||.......- ....................++.+.+.+|.++|+.||.+|.|+++|++.
T Consensus 524 ~Wk~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~l~~~P~~R~ti~~i~~d 585 (601)
T KOG0590|consen 524 PWKVAKKSDNSFKTNNYSDQRNIFEGPNRLLSLLPRETRIIIYRMLQLDPTKRITIEQILND 585 (601)
T ss_pred ccccccccccchhhhccccccccccChHHHHHhchhhHHHHHHHHccCChhheecHHHHhhC
Confidence 6543211100 0000000000111112223467789999999999999999999999864
|
|
| >KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.87 E-value=5.9e-22 Score=174.51 Aligned_cols=244 Identities=14% Similarity=0.123 Sum_probs=193.2
Q ss_pred CCCcccceeee--ecceecccccCCCchhhhHHHHHHHHHhcC-CCcCcceeEEEEEeCCeeeEEEecCCCCCHHhHhcc
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESSDLGETLNLEEAKAVGNL-RSERLANLIGCCYEADERLLVAEFMPNETLAKHLFH 78 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~ 78 (424)
|+||..|.+.. .+..|++|. ++.....-.+..|.+..+.| ..+.|+.++-+...+.+..||||++ |.||+|+. +
T Consensus 39 GsFG~lf~G~Nl~nne~VAIKf-EPrkS~APQLrdEYr~YKlL~g~~GIP~vYYFGqeG~~NiLVidLL-GPSLEDLF-D 115 (449)
T KOG1165|consen 39 GSFGVLFLGKNLYNNEPVAIKF-EPRKSEAPQLRDEYRTYKLLGGTEGIPQVYYFGQEGKYNILVIDLL-GPSLEDLF-D 115 (449)
T ss_pred CcceeeecccccccCceEEEEe-ccccCCcchHHHHHHHHHHHcCCCCCCceeeeccccchhhhhhhhh-CcCHHHHH-H
Confidence 88999998865 777787664 44444455677899888888 5799999999999998899999999 88999976 3
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCC-----CeEEccccccccCCCC-----------C
Q 014478 79 WETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDG-----NPRLSSFGLMKNSRDG-----------K 142 (424)
Q Consensus 79 ~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~-----~~kl~Dfg~~~~~~~~-----------~ 142 (424)
.-++.|+..+++-++.|++.-++++|++. +|.|||||+|+||..-+ .+.++|||+++...+. .
T Consensus 116 ~CgR~FSvKTV~miA~Qmi~rie~vH~k~-LIYRDIKPdNFLIGrp~~k~~n~IhiiDFGmAK~YrDp~TkqHIPYrE~K 194 (449)
T KOG1165|consen 116 LCGRRFSVKTVAMIAKQMITRIEYVHEKD-LIYRDIKPDNFLIGRPGTKDANVIHIIDFGMAKEYRDPKTKQHIPYREHK 194 (449)
T ss_pred HhcCcccHHhHHHHHHHHHHHHHHHHhcc-eeecccCccceeecCCCCCCCceEEEEeccchhhhcCccccccCcccccc
Confidence 45788999999999999999999999999 99999999999996544 4899999999875532 4
Q ss_pred ccccCccCCCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhcc---cCCCCCchhHHHHHH
Q 014478 143 SYSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSA---LEGHFSNDEGTELVR 219 (424)
Q Consensus 143 ~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~l~~ 219 (424)
+..||..||+-..-.+.+.+.+.|+-|||.|+...+-|..||.+-... ..++...++-+.. .........|.++..
T Consensus 195 SLsGTARYMSINTHlGrEQSRRDDLEaLGHvFmYFLRGsLPWQGLKA~-tnK~kYeKIGe~Kr~T~i~~Lc~g~P~efa~ 273 (449)
T KOG1165|consen 195 SLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAD-TNKEKYEKIGETKRSTPIEVLCEGFPEEFAT 273 (449)
T ss_pred ccccceeeeEeeccccchhhhhhhHHHhhhhhhhhccCCCccccccCc-chHHHHHHhccccccCCHHHHHhcCHHHHHH
Confidence 567999999999988889999999999999999999999888763211 1122222222211 111223456888999
Q ss_pred HHHHhcccCcCCCCCHHHHHHHHHHHhhhhh
Q 014478 220 LASRCLQSEARERPNAKSLVISLMSLQKEAE 250 (424)
Q Consensus 220 li~~cl~~dp~~Rps~~~~~~~l~~~~~~~~ 250 (424)
.+.-.-..+-.+-|+.+-+...+..+.....
T Consensus 274 Yl~yvR~L~F~E~PDYdylr~Lf~dvldr~g 304 (449)
T KOG1165|consen 274 YLRYVRRLDFFETPDYDYLRKLFDDVLDRLG 304 (449)
T ss_pred HHHHHHhcCcccCCCHHHHHHHHHHHHHhcC
Confidence 9988888899999999998888888776544
|
|
| >KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.86 E-value=9.5e-22 Score=165.90 Aligned_cols=244 Identities=14% Similarity=0.108 Sum_probs=190.7
Q ss_pred CCCcccceeee--ecceecccccCCCchhhhHHHHHHHHHhcCCC-cCcceeEEEEEeCCeeeEEEecCCCCCHHhHhcc
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESSDLGETLNLEEAKAVGNLRS-ERLANLIGCCYEADERLLVAEFMPNETLAKHLFH 78 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~~~~~~~~~~E~~~l~~l~h-~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~ 78 (424)
|+||.+|.+.. .+..|++|+-.. ....-.+..|.++.+.|++ ..|+.+..++.+.+...+||+++ |.||+++..-
T Consensus 26 GSFGdIy~~~~i~~ge~VAiK~Es~-~a~hpqL~yEskvY~iL~~g~GiP~i~~y~~e~~ynvlVMdLL-GPsLEdLfnf 103 (341)
T KOG1163|consen 26 GSFGDIYLGISITSGEEVAIKLESS-KAKHPQLLYESKVYRILQGGVGIPHIRHYGTEKDYNVLVMDLL-GPSLEDLFNF 103 (341)
T ss_pred CchhheeeeeeccCCceEEEEeecc-cCCCcchhHHHHHHHHhccCCCCchhhhhccccccceeeeecc-CccHHHHHHH
Confidence 89999999987 678888776433 3334567789999999964 67889999999999999999999 8899998743
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCC---CCeEEccccccccCCC-----------CCcc
Q 014478 79 WETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKD---GNPRLSSFGLMKNSRD-----------GKSY 144 (424)
Q Consensus 79 ~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~---~~~kl~Dfg~~~~~~~-----------~~~~ 144 (424)
-.+.++..+++-++-|++.-++|+|.++ +|||||||+|+|+.-+ ..+.++|||+++...+ ....
T Consensus 104 -C~R~ftmkTvLMLaDQml~RiEyvH~r~-fiHRDIKPdNFLMGlgrh~~kl~LIDFGLaKky~d~~t~~HIpyre~r~l 181 (341)
T KOG1163|consen 104 -CSRRFTMKTVLMLADQMLSRIEYVHLRN-FIHRDIKPDNFLMGLGRHCNKLYLIDFGLAKKYRDIRTRQHIPYREDRNL 181 (341)
T ss_pred -HhhhhhHHhHHHHHHHHHHHHHHHHhhc-cccccCCccceeeccccccceEEEEeccchhhhccccccccCccccCCcc
Confidence 3567999999999999999999999999 9999999999999643 4589999999986542 2345
Q ss_pred ccCccCCCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhcc---cCCCCCchhHHHHHHHH
Q 014478 145 STNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSA---LEGHFSNDEGTELVRLA 221 (424)
Q Consensus 145 ~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~l~~li 221 (424)
.||..|.+-....+-..+.+.|+-|+|.++...--|..||.+-. .....+....+.... .........|.++.-.+
T Consensus 182 tGTaRYASinAh~g~eqSRRDDmeSvgYvLmYfnrG~LPWQglk-a~tk~QKyEkI~EkK~s~~ie~LC~G~P~EF~myl 260 (341)
T KOG1163|consen 182 TGTARYASINAHLGIEQSRRDDMESVGYVLMYFNRGSLPWQGLK-AATKKQKYEKISEKKMSTPIEVLCKGFPAEFAMYL 260 (341)
T ss_pred ceeeeehhhhhhhhhhhhhhhhhhhhcceeeeeecCCCcccccc-hhhHHHHHHHHHHhhcCCCHHHHhCCCcHHHHHHH
Confidence 78999988777666677889999999999999888998877631 122223333332222 22223445688999999
Q ss_pred HHhcccCcCCCCCHHHHHHHHHHHhhhhh
Q 014478 222 SRCLQSEARERPNAKSLVISLMSLQKEAE 250 (424)
Q Consensus 222 ~~cl~~dp~~Rps~~~~~~~l~~~~~~~~ 250 (424)
.-|-..--++-|+..-+.+.+..+.....
T Consensus 261 ~Y~R~L~F~E~Pdy~ylrqlFriLfr~ln 289 (341)
T KOG1163|consen 261 NYCRGLGFEEKPDYMYLRQLFRILFRTLN 289 (341)
T ss_pred HHHhhcCCCCCCcHHHHHHHHHHHHhhcc
Confidence 99999999999999988888877766544
|
|
| >KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.86 E-value=1.5e-21 Score=175.84 Aligned_cols=191 Identities=14% Similarity=0.168 Sum_probs=147.3
Q ss_pred CCcCcceeEEEEEeC---------------------------CeeeEEEecCCCCCHHhHhccCCCCCCCHHHHHHHHHH
Q 014478 43 RSERLANLIGCCYEA---------------------------DERLLVAEFMPNETLAKHLFHWETQPMKWAMRLRVALY 95 (424)
Q Consensus 43 ~h~~iv~~~~~~~~~---------------------------~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~q 95 (424)
+|||||+++++|.+. ..+|+||.-++. ||..++. .+..+.....-++.|
T Consensus 274 ~HPNIvri~~aF~dsv~~lPda~~~YPdalp~R~~p~g~g~~~tlylvMkrY~~-tLr~yl~---~~~~s~r~~~~~laQ 349 (598)
T KOG4158|consen 274 KHPNIVRIQTAFIDSVKVLPDAIERYPDALPARWYPSGAGEPKTLYLVMKRYRQ-TLREYLW---TRHRSYRTGRVILAQ 349 (598)
T ss_pred CCCCEEeehhhhhhhhccCCchhhhCcccccceecccccCCCceEEEehhcchh-hHHHHHh---cCCCchHHHHHHHHH
Confidence 699999999887542 247999999976 9999995 345677778889999
Q ss_pred HHHHHHHHHhCCCcccccCCCCCeee--cCCC--CeEEccccccccCCC----------CCccccCccCCCccccccCC-
Q 014478 96 LAQALEYCSSKGRALYHDLNAYRILF--DKDG--NPRLSSFGLMKNSRD----------GKSYSTNLAFTPPEYMRTGR- 160 (424)
Q Consensus 96 i~~~L~~lH~~~~ivH~dikp~Nill--~~~~--~~kl~Dfg~~~~~~~----------~~~~~gt~~y~aPE~~~~~~- 160 (424)
+++|+.|||.+| |.|||+|++|||+ ++|+ .++|+|||.+---.. .....|+..-||||+....+
T Consensus 350 lLEav~hL~~hg-vAhRDlKSDNiL~ElddD~~P~LVvaDFGCcLAd~~hGlqlpy~S~~Vd~GGNa~lmAPEi~ta~PG 428 (598)
T KOG4158|consen 350 LLEAVTHLHKHG-VAHRDLKSDNILLELDDDEIPQLVVADFGCCLADDNHGLQLPYESDEVDLGGNAKLMAPEIATAVPG 428 (598)
T ss_pred HHHHHHHHHHcc-chhhcccccceEEEecCCCCcEEEEcccceeeeccccccccccccccccCCCcceecchhhhhcCCC
Confidence 999999999999 9999999999999 5555 378999997643221 12345678889999987432
Q ss_pred ----C-CCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHHHHHHHHHhcccCcCCCCCH
Q 014478 161 ----V-TPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERPNA 235 (424)
Q Consensus 161 ----~-~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~ 235 (424)
+ -.++|.|+.|.+.||+++...||+....-..+... ......+..|..+++.+++++...|+.||++|+|.
T Consensus 429 p~avvny~kAD~WA~GalaYEIfg~~NPFY~rGem~L~~r~----Yqe~qLPalp~~vpp~~rqlV~~lL~r~pskRvsp 504 (598)
T KOG4158|consen 429 PNAVVNYEKADTWAAGALAYEIFGRSNPFYKRGEMLLDTRT----YQESQLPALPSRVPPVARQLVFDLLKRDPSKRVSP 504 (598)
T ss_pred CceeeccchhhhhhhhhhHHHHhccCCcccccchheechhh----hhhhhCCCCcccCChHHHHHHHHHhcCCccccCCc
Confidence 2 24899999999999999999999874333333332 22334456777889999999999999999999887
Q ss_pred HHHHHHH
Q 014478 236 KSLVISL 242 (424)
Q Consensus 236 ~~~~~~l 242 (424)
.-....|
T Consensus 505 ~iAANvl 511 (598)
T KOG4158|consen 505 NIAANVL 511 (598)
T ss_pred cHHHhHH
Confidence 6554443
|
|
| >PRK12274 serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.85 E-value=5.2e-21 Score=163.03 Aligned_cols=171 Identities=16% Similarity=0.108 Sum_probs=129.3
Q ss_pred CCCcccceeeeecceecccccCCCchhhh-----HHHHHHHHHhcCC-CcCcceeEEEEEeCCeeeEEEecCCCCCHHhH
Q 014478 2 GGRCSKFSICWFHCHLKSSVLESSDLGET-----LNLEEAKAVGNLR-SERLANLIGCCYEADERLLVAEFMPNETLAKH 75 (424)
Q Consensus 2 G~~g~v~~~~~~~~~v~~~~~~~~~~~~~-----~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~ 75 (424)
|+||.|+.+...+.++....+..+..... .|.+|+++|++|. |++|++++++ +..+++|||++|.+|...
T Consensus 13 ~~f~~v~~~~~~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~----~~~~lvmeyI~G~~L~~~ 88 (218)
T PRK12274 13 DTFGRILLVRGGERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHW----DGRHLDRSYLAGAAMYQR 88 (218)
T ss_pred CCcceEEEeecCCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEE----cCEEEEEeeecCccHHhh
Confidence 78999996665555555555555544323 6889999999995 5889999986 346999999999999765
Q ss_pred hccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccC-CCCCeeecCCCCeEEccccccccCCCCCcc----------
Q 014478 76 LFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDL-NAYRILFDKDGNPRLSSFGLMKNSRDGKSY---------- 144 (424)
Q Consensus 76 l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~di-kp~Nill~~~~~~kl~Dfg~~~~~~~~~~~---------- 144 (424)
+.. ....++.|++.+|.++|++| |+|||| ||+|||++.++.++|+|||++.........
T Consensus 89 ~~~---------~~~~~~~qi~~~L~~lH~~G-IvHrDL~kp~NILv~~~g~i~LIDFG~A~~~~~~~~~~r~L~~rDl~ 158 (218)
T PRK12274 89 PPR---------GDLAYFRAARRLLQQLHRCG-VAHNDLAKEANWLVQEDGSPAVIDFQLAVRGNPRARWMRLLAREDLR 158 (218)
T ss_pred hhh---------hhHHHHHHHHHHHHHHHHCc-CccCCCCCcceEEEcCCCCEEEEECCCceecCCcchHHHHHHHHHHH
Confidence 421 11357889999999999999 999999 799999999999999999999865543210
Q ss_pred -------ccCccCCCccccccC-CCC-CCcceehhHHHHHHHhhCCCCCCc
Q 014478 145 -------STNLAFTPPEYMRTG-RVT-PESVVYSFGTMLLDLLSGKHIPPS 186 (424)
Q Consensus 145 -------~gt~~y~aPE~~~~~-~~~-~~~Dv~slG~~l~el~~g~~~~~~ 186 (424)
..++.|+.|+.-.-. ..+ ...+.++.|+.+|.++|+..+...
T Consensus 159 ~llk~~~~y~~~~l~~~~~~~l~~~~~~~~~w~~~g~~~~~~~~~~~~~~~ 209 (218)
T PRK12274 159 HLLKHKRMYCPAALTPVERRVLKRTSWIRELWFATGKPVYRFVTRRVLHWE 209 (218)
T ss_pred HHHHHHHhcCCCCCCHHHHhhhccchhHHHHHHHhcchHHHHHhccCCccc
Confidence 135677777754422 223 467888999999999999976554
|
|
| >KOG0553 consensus TPR repeat-containing protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.85 E-value=5.4e-21 Score=166.98 Aligned_cols=108 Identities=21% Similarity=0.320 Sum_probs=104.0
Q ss_pred HhHHHHHHHHHHHhHHHhhCCHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhcCCCchHHHHH
Q 014478 314 SQMQETLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYL 393 (424)
Q Consensus 314 ~~~~~~~~~~~~g~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~ 393 (424)
.....++.++.+|+.+++.++|++|+..|++||+++|. ++.+|.|||.+|.++|+|+.|+++|+.||.+||.+.++|.+
T Consensus 76 e~~~~AE~LK~eGN~~m~~~~Y~eAv~kY~~AI~l~P~-nAVyycNRAAAy~~Lg~~~~AVkDce~Al~iDp~yskay~R 154 (304)
T KOG0553|consen 76 EDKALAESLKNEGNKLMKNKDYQEAVDKYTEAIELDPT-NAVYYCNRAAAYSKLGEYEDAVKDCESALSIDPHYSKAYGR 154 (304)
T ss_pred hHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhcCCC-cchHHHHHHHHHHHhcchHHHHHHHHHHHhcChHHHHHHHH
Confidence 34567889999999999999999999999999999999 99999999999999999999999999999999999999999
Q ss_pred HHHHHHhCCChHHHHHHHHHHHhchhhcC
Q 014478 394 QAACLFSLGMENDARETLKDGTNLEAKKN 422 (424)
Q Consensus 394 ~g~~~~~~~~~~~A~~~~~~al~l~~~~~ 422 (424)
+|.+|+.+|+|++|++.|++||++||.+.
T Consensus 155 LG~A~~~~gk~~~A~~aykKaLeldP~Ne 183 (304)
T KOG0553|consen 155 LGLAYLALGKYEEAIEAYKKALELDPDNE 183 (304)
T ss_pred HHHHHHccCcHHHHHHHHHhhhccCCCcH
Confidence 99999999999999999999999999863
|
|
| >PRK10359 lipopolysaccharide core biosynthesis protein; Provisional | Back alignment and domain information |
|---|
Probab=99.84 E-value=2.5e-21 Score=168.70 Aligned_cols=157 Identities=14% Similarity=0.044 Sum_probs=120.4
Q ss_pred CCCcccceeeeecceecccccCCCchhhh----H------HHHHHHHHhcCCCcCcceeEEEEEeC--------CeeeEE
Q 014478 2 GGRCSKFSICWFHCHLKSSVLESSDLGET----L------NLEEAKAVGNLRSERLANLIGCCYEA--------DERLLV 63 (424)
Q Consensus 2 G~~g~v~~~~~~~~~v~~~~~~~~~~~~~----~------~~~E~~~l~~l~h~~iv~~~~~~~~~--------~~~~lv 63 (424)
||||.||.....+..+++|++.......+ . +.+|++.+.++.|++|+.+.+++... ...+|+
T Consensus 42 ~~f~~v~l~~~~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~~~GI~~~~d~~~~~~~~~~~~~~~~~lv 121 (232)
T PRK10359 42 IDDTKVSLIDTDYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVRSEGLASLNDFYLLAERKTLRYAHTYIML 121 (232)
T ss_pred CCceEEEEEecCCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHHHCCCCcceEeeeecccccccccCCeEEE
Confidence 89999998776677788888854432222 2 57899999999999999999886643 347899
Q ss_pred EecCCCCCHHhHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCCCc
Q 014478 64 AEFMPNETLAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKS 143 (424)
Q Consensus 64 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~~~ 143 (424)
|||++|.+|.++.. ++. ....+++.+|..+|+.| ++|||+||+||+++.+| ++|+|||..........
T Consensus 122 mEyi~G~tL~~~~~------~~~----~~~~~i~~~l~~lH~~g-i~H~Dikp~Nili~~~g-i~liDfg~~~~~~e~~a 189 (232)
T PRK10359 122 IEYIEGVELNDMPE------ISE----DVKAKIKASIESLHQHG-MVSGDPHKGNFIVSKNG-LRIIDLSGKRCTAQRKA 189 (232)
T ss_pred EEEECCccHHHhhh------ccH----HHHHHHHHHHHHHHHcC-CccCCCChHHEEEeCCC-EEEEECCCcccccchhh
Confidence 99999999988741 232 34669999999999999 99999999999999888 99999998765532221
Q ss_pred cccCccCCCccccccCCCCCCcceehhHHHHHHHh
Q 014478 144 YSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLL 178 (424)
Q Consensus 144 ~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~ 178 (424)
. ...+....++.++|+||||+.+.-..
T Consensus 190 ~--------d~~vler~y~~~~di~~lg~~~~~~~ 216 (232)
T PRK10359 190 K--------DRIDLERHYGIKNEIKDLGYYLLIYK 216 (232)
T ss_pred H--------HHHHHHhHhcccccccceeEeehHHH
Confidence 1 01333445678999999999876543
|
|
| >KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.84 E-value=1.6e-21 Score=185.90 Aligned_cols=217 Identities=18% Similarity=0.195 Sum_probs=173.0
Q ss_pred CCCcccceee-----eecceecccccCCCch---hhhHHHHHHHHHhcCC-CcCcceeEEEEEeCCeeeEEEecCCCCCH
Q 014478 2 GGRCSKFSIC-----WFHCHLKSSVLESSDL---GETLNLEEAKAVGNLR-SERLANLIGCCYEADERLLVAEFMPNETL 72 (424)
Q Consensus 2 G~~g~v~~~~-----~~~~~v~~~~~~~~~~---~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~~lv~e~~~~gsL 72 (424)
|++|.||.+. ..+.-.+.+++..... .+.....|..++..++ ||.+++++-.+..+...++++++..||.|
T Consensus 5 g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~~~~~t~~er~il~~~~~~~f~v~lhyafqt~~kl~l~ld~~rgg~l 84 (612)
T KOG0603|consen 5 GSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVRDRTHTKQERIILAFVHNTPFLVKLHYAFQTDGKLYLILDFLRGGDL 84 (612)
T ss_pred CCCcchHHHHHhccccccchhhhhcccccccccccccccccHHHHHhhccCCCceeeeeeeeccccchhHhhhhcccchh
Confidence 6777777543 2233333344332221 1124456788888886 99999999999999999999999999999
Q ss_pred HhHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCCCccccCccCCC
Q 014478 73 AKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLAFTP 152 (424)
Q Consensus 73 ~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~gt~~y~a 152 (424)
...+.+ ...+++.....+...++-+++++|+.+ ++|||+|++||+++.+|++++.|||+++..-.....+||..|||
T Consensus 85 ft~l~~--~~~f~~~~~~~~~aelaLald~lh~l~-iiyrd~k~enilld~~Ghi~~tdfglske~v~~~~~cgt~eymA 161 (612)
T KOG0603|consen 85 FTRLSK--EVMFDELDVAFYLAELALALDHLHKLG-IAYRDYKLENVLLLLEGHIKLTDFGLSKEAVKEKIACGTYEYRA 161 (612)
T ss_pred hhcccc--CCchHHHHHHHHHHHHHHHHhhcchhH-HHHhcccccceeecccCccccCCchhhhHhHhhhhcccchhhhh
Confidence 988864 456777788888999999999999999 99999999999999999999999999998777777799999999
Q ss_pred ccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHHHHHHHHHhcccCcCCC
Q 014478 153 PEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARER 232 (424)
Q Consensus 153 PE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~R 232 (424)
||.+. .....+|.||||++.+||+||..||.... + ..+.. .....|...+....+++..++..+|.+|
T Consensus 162 pEI~~--gh~~a~D~ws~gvl~felltg~~pf~~~~---~-----~~Il~--~~~~~p~~l~~~a~~~~~~l~~r~p~nr 229 (612)
T KOG0603|consen 162 PEIIN--GHLSAADWWSFGVLAFELLTGTLPFGGDT---M-----KRILK--AELEMPRELSAEARSLFRQLFKRNPENR 229 (612)
T ss_pred hHhhh--ccCCcccchhhhhhHHHHhhCCCCCchHH---H-----HHHhh--hccCCchhhhHHHHHHHHHHHhhCHHHH
Confidence 99998 55678999999999999999998877621 1 11111 1234677788899999999999999999
Q ss_pred C
Q 014478 233 P 233 (424)
Q Consensus 233 p 233 (424)
-
T Consensus 230 L 230 (612)
T KOG0603|consen 230 L 230 (612)
T ss_pred h
Confidence 5
|
|
| >cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain | Back alignment and domain information |
|---|
Probab=99.83 E-value=1.5e-20 Score=162.11 Aligned_cols=133 Identities=15% Similarity=0.164 Sum_probs=103.1
Q ss_pred CCCcccceeee-ecceecccccCCCch---h-------hhHH-----------------HHHHHHHhcCCCcCcceeEEE
Q 014478 2 GGRCSKFSICW-FHCHLKSSVLESSDL---G-------ETLN-----------------LEEAKAVGNLRSERLANLIGC 53 (424)
Q Consensus 2 G~~g~v~~~~~-~~~~v~~~~~~~~~~---~-------~~~~-----------------~~E~~~l~~l~h~~iv~~~~~ 53 (424)
||+|.||.+.. .+..|++|++..... . ...| ..|++.+.++.++++.....+
T Consensus 8 G~~~~Vy~a~~~~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~v~~p~~~ 87 (190)
T cd05147 8 GKEANVYHATTANGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVTAGIPCPEPI 87 (190)
T ss_pred ccceEEEEEECCCCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCcEE
Confidence 89999999987 578899988854421 1 1122 349999999988876443333
Q ss_pred EEeCCeeeEEEecCCCCCHHhHhccCCCCCCCHHHHHHHHHHHHHHHHHH-HhCCCcccccCCCCCeeecCCCCeEEccc
Q 014478 54 CYEADERLLVAEFMPNETLAKHLFHWETQPMKWAMRLRVALYLAQALEYC-SSKGRALYHDLNAYRILFDKDGNPRLSSF 132 (424)
Q Consensus 54 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~l-H~~~~ivH~dikp~Nill~~~~~~kl~Df 132 (424)
... ..+|||||++|++|..... ...+++..++..++.|++.+|.++ |+.+ |+||||||+|||++ ++.++|+||
T Consensus 88 ~~~--~~~iVmE~i~g~~l~~~~~--~~~~~~~~~~~~i~~qi~~~L~~l~H~~g-iiHrDlkP~NIli~-~~~v~LiDF 161 (190)
T cd05147 88 LLK--SHVLVMEFIGDDGWAAPRL--KDAPLSESKARELYLQVIQIMRILYQDCR-LVHADLSEYNLLYH-DGKLYIIDV 161 (190)
T ss_pred Eec--CCEEEEEEeCCCCCcchhh--hcCCCCHHHHHHHHHHHHHHHHHHHHhCC-cccCCCCHHHEEEE-CCcEEEEEc
Confidence 222 2389999999987765532 245789999999999999999999 6889 99999999999998 578999999
Q ss_pred cccccCCC
Q 014478 133 GLMKNSRD 140 (424)
Q Consensus 133 g~~~~~~~ 140 (424)
|++.....
T Consensus 162 G~a~~~~~ 169 (190)
T cd05147 162 SQSVEHDH 169 (190)
T ss_pred cccccCCC
Confidence 99876543
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c |
| >cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain | Back alignment and domain information |
|---|
Probab=99.81 E-value=1.4e-19 Score=156.54 Aligned_cols=133 Identities=15% Similarity=0.183 Sum_probs=104.5
Q ss_pred CCCcccceeee-ecceecccccCCCchh---------------------------hhHHHHHHHHHhcCCCcCcceeEEE
Q 014478 2 GGRCSKFSICW-FHCHLKSSVLESSDLG---------------------------ETLNLEEAKAVGNLRSERLANLIGC 53 (424)
Q Consensus 2 G~~g~v~~~~~-~~~~v~~~~~~~~~~~---------------------------~~~~~~E~~~l~~l~h~~iv~~~~~ 53 (424)
|++|.||.+.. .+..|++|++...... ...+..|.+.+.++.|++|.....+
T Consensus 8 G~~~~Vy~a~~~~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~ 87 (190)
T cd05145 8 GKEANVYHARTGDGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYEAGVPVPEPI 87 (190)
T ss_pred CCCcEEEEEEcCCCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHhCCCCCceEE
Confidence 89999999987 4888998887654211 1234578999999999987544444
Q ss_pred EEeCCeeeEEEecCCCCCHHhHhccCCCCCCCHHHHHHHHHHHHHHHHHHHh-CCCcccccCCCCCeeecCCCCeEEccc
Q 014478 54 CYEADERLLVAEFMPNETLAKHLFHWETQPMKWAMRLRVALYLAQALEYCSS-KGRALYHDLNAYRILFDKDGNPRLSSF 132 (424)
Q Consensus 54 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~-~~~ivH~dikp~Nill~~~~~~kl~Df 132 (424)
... ..+|||||++|+++..... ...+++..+..+++.|++.+|.++|+ +| |+||||||+||+++ ++.++|+||
T Consensus 88 ~~~--~~~lVmE~~~g~~~~~~~l--~~~~~~~~~~~~i~~~l~~~l~~lH~~~g-ivHrDlkP~NIll~-~~~~~liDF 161 (190)
T cd05145 88 LLK--KNVLVMEFIGDDGSPAPRL--KDVPLEEEEAEELYEQVVEQMRRLYQEAG-LVHGDLSEYNILYH-DGKPYIIDV 161 (190)
T ss_pred Eec--CCEEEEEEecCCCchhhhh--hhccCCHHHHHHHHHHHHHHHHHHHHhCC-EecCCCChhhEEEE-CCCEEEEEc
Confidence 333 2489999999886544322 23567888999999999999999999 99 99999999999999 889999999
Q ss_pred cccccCCC
Q 014478 133 GLMKNSRD 140 (424)
Q Consensus 133 g~~~~~~~ 140 (424)
|++.....
T Consensus 162 G~a~~~~~ 169 (190)
T cd05145 162 SQAVELDH 169 (190)
T ss_pred ccceecCC
Confidence 99887654
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro |
| >KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
Probab=99.81 E-value=1.7e-20 Score=175.66 Aligned_cols=168 Identities=23% Similarity=0.357 Sum_probs=127.6
Q ss_pred eeeEEEecCCCCCHHhHhccC-CCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEcccccccc
Q 014478 59 ERLLVAEFMPNETLAKHLFHW-ETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKN 137 (424)
Q Consensus 59 ~~~lv~e~~~~gsL~~~l~~~-~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~ 137 (424)
.++|.|++|...+|.+||.+. .....++.....++.|++.|++| ++ .+|+|+||.||+...+..+||.|||+...
T Consensus 330 ~lyI~Mn~c~~~tledWl~rr~~~e~~s~s~~~~~~~q~~~~~~y---k~-~ihrdlkp~nif~~~d~q~kIgDFgl~ts 405 (516)
T KOG1033|consen 330 YLYIQMNLCEKETLEDWLRRRRTGEERSLSLMLDIFKQIAPAVEY---KG-LIHRDLKPSNIFFSDDDQLKIGDFGLVTS 405 (516)
T ss_pred chhhhhhhhhhhhHHHHhhCCCcccccchhHHHHHHHhhccchhh---cc-chhhhccccccccccchhhhhhhhhheee
Confidence 478999999999999999632 34456788899999999999999 88 99999999999999999999999999765
Q ss_pred CCCC----------CccccCccCCCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhh-hhhhHhhhcccC
Q 014478 138 SRDG----------KSYSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRS-KNFLLLMDSALE 206 (424)
Q Consensus 138 ~~~~----------~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~-~~~~~~~~~~~~ 206 (424)
.... +...||..||+||++.+..|+.++||||||++|+|++.-. ... ++. ..+..+.+..++
T Consensus 406 ~~~~~~~~~~~a~~t~~~gt~~YmsPEQi~g~~y~~kvdIyaLGlil~EL~~~f---~T~----~er~~t~~d~r~g~ip 478 (516)
T KOG1033|consen 406 QDKDETVAPAAASHTQQVGTLLYMSPEQIRGQQYSEKVDIYALGLILAELLIQF---STQ----FERIATLTDIRDGIIP 478 (516)
T ss_pred cccCCcccchhhhhhhcccccccCCHHHHhhhhhhhhcchhhHHHHHHHHHHHh---ccH----HHHHHhhhhhhcCCCC
Confidence 4432 2457899999999999999999999999999999999721 111 111 111112222221
Q ss_pred CCCCchhHHHHHHHHHHhcccCcCCCCCHHHH
Q 014478 207 GHFSNDEGTELVRLASRCLQSEARERPNAKSL 238 (424)
Q Consensus 207 ~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~~ 238 (424)
+.+-.+ -++-..|+.+++.+.|.+||++.++
T Consensus 479 ~~~~~d-~p~e~~ll~~lls~~p~~RP~~~~~ 509 (516)
T KOG1033|consen 479 PEFLQD-YPEEYTLLQQLLSPSPEERPSAIEV 509 (516)
T ss_pred hHHhhc-CcHHHHHHHHhcCCCcccCchHHHH
Confidence 111111 2345689999999999999965554
|
|
| >PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A | Back alignment and domain information |
|---|
Probab=99.80 E-value=6.8e-20 Score=164.51 Aligned_cols=219 Identities=19% Similarity=0.160 Sum_probs=136.7
Q ss_pred CCCcccceeee--ecceecccccCC----CchhhhHHHHHHHHHhcCCC----------cCcceeEEEEEe---------
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLES----SDLGETLNLEEAKAVGNLRS----------ERLANLIGCCYE--------- 56 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~----~~~~~~~~~~E~~~l~~l~h----------~~iv~~~~~~~~--------- 56 (424)
|+++.||.+.+ .+..++++++.. .....+.+.+|.-....+.+ -.++..++...-
T Consensus 23 g~~~~v~~v~d~~t~~~~avkvf~~~~~~~~~~~~~~~~e~l~~~~~~~~~~p~~a~~~~r~l~P~d~~~i~~~~~~~~~ 102 (288)
T PF14531_consen 23 GGFSIVFEVTDVETGEEFAVKVFLLPADASANEYEQLKEEQLAITLFPGVKNPKEAYRHLRFLVPLDLLRIPGKPPFFER 102 (288)
T ss_dssp ETTEEEEEEEETTTTEEEEEEEEEESSTTHTTHHHHHHHHHHGGGGSTT--SHHHHHHHH-B---SEEEEETTS-SEEEE
T ss_pred CCceEEEEEEEccCCceEEEEEEecccccchHHHHHHHHHHHHhhhhccCCCHHHHHHhceEEeeeEEEEEcCCCcceec
Confidence 78899999988 447777766632 22235566666655555432 123333333221
Q ss_pred CC--------eeeEEEecCCCCCHHhHhc---cCCCC--CCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecC
Q 014478 57 AD--------ERLLVAEFMPNETLAKHLF---HWETQ--PMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDK 123 (424)
Q Consensus 57 ~~--------~~~lv~e~~~~gsL~~~l~---~~~~~--~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~ 123 (424)
.. +.+++|+-+.+ +|.+++. ..... ++.......+..|+++.+++||+.| ++|+||+|+|++++.
T Consensus 103 ~~~~~~~~v~n~~~l~P~~~~-dL~~~~~~l~~~~~~~~~l~~~arl~lT~Q~I~lvA~Lh~~G-lVHgdi~~~nfll~~ 180 (288)
T PF14531_consen 103 GPGQSIYWVLNRFLLMPRAQG-DLQDLVEALFSRAQTHSPLAFAARLSLTVQMIRLVANLHSYG-LVHGDIKPENFLLDQ 180 (288)
T ss_dssp CETTEEEEEESEEEEEE--SE-EHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTT-EEEST-SGGGEEE-T
T ss_pred CCCCccceeehhhhccchhhh-cHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHhhcc-eEecccceeeEEEcC
Confidence 11 23678888754 8888753 21111 2223344566689999999999999 999999999999999
Q ss_pred CCCeEEccccccccCCCCCc-cccCccCCCccccccC--------CCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhh
Q 014478 124 DGNPRLSSFGLMKNSRDGKS-YSTNLAFTPPEYMRTG--------RVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRS 194 (424)
Q Consensus 124 ~~~~kl~Dfg~~~~~~~~~~-~~gt~~y~aPE~~~~~--------~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~ 194 (424)
+|.+.|+||+.....+.... ...+..|.|||..... .++.+.|.|+||+++|.|+++..||..........
T Consensus 181 ~G~v~Lg~F~~~~r~g~~~~~~~~~~~~~PPe~~~~~~~~~~~~~~~t~~~DaW~LG~~ly~lWC~~lPf~~~~~~~~~~ 260 (288)
T PF14531_consen 181 DGGVFLGDFSSLVRAGTRYRCSEFPVAFTPPELESCAGQFGQNNAPYTFATDAWQLGITLYSLWCGRLPFGLSSPEADPE 260 (288)
T ss_dssp TS-EEE--GGGEEETTEEEEGGGS-TTTS-HHHHHHHTSCHHSEEEE-HHHHHHHHHHHHHHHHHSS-STCCCGGGSTSG
T ss_pred CCCEEEcChHHHeecCceeeccCCCcccCChhhhhhhcccCcccceeeeccCHHHHHHHHHHHHHccCCCCCCCcccccc
Confidence 99999999998776655433 3456789999976432 47889999999999999999998877542111111
Q ss_pred hhhhHhhhcccCCCCCchhHHHHHHHHHHhcccCcCCC
Q 014478 195 KNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARER 232 (424)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~R 232 (424)
. .-..+. ++|+.+..||..+|+.||.+|
T Consensus 261 ~---------~f~~C~-~~Pe~v~~LI~~lL~~~~~~R 288 (288)
T PF14531_consen 261 W---------DFSRCR-DMPEPVQFLIRGLLQRNPEDR 288 (288)
T ss_dssp G---------GGTTSS----HHHHHHHHHHT-SSGGGS
T ss_pred c---------cchhcC-CcCHHHHHHHHHHccCCcccC
Confidence 1 112233 789999999999999999988
|
|
| >PRK10345 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.78 E-value=1e-18 Score=152.01 Aligned_cols=126 Identities=15% Similarity=0.063 Sum_probs=95.1
Q ss_pred CCCcccceeeeecceecccccCCC-chhhhHHHHHHHHHhcC-----CCcCcceeEEEEEeCC---eee-EEEec--CCC
Q 014478 2 GGRCSKFSICWFHCHLKSSVLESS-DLGETLNLEEAKAVGNL-----RSERLANLIGCCYEAD---ERL-LVAEF--MPN 69 (424)
Q Consensus 2 G~~g~v~~~~~~~~~v~~~~~~~~-~~~~~~~~~E~~~l~~l-----~h~~iv~~~~~~~~~~---~~~-lv~e~--~~~ 69 (424)
|++|.||.-...+. ..+|++... ....+.+.+|+++++.+ .||||++++|++.++. ..+ +|||| +++
T Consensus 13 G~~~~Vy~hp~~~~-k~IKv~~~~~~~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g~g~v~~~I~e~~G~~~ 91 (210)
T PRK10345 13 GRHRKCYAHPEDAQ-RCIKIVYHRGDGGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDCGTGYVYDVIADFDGKPS 91 (210)
T ss_pred CCceEEEECCCCcC-eEEEEEeccccchHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCCCCeEEEEEEecCCCCcc
Confidence 78888885222222 234444332 22456789999999999 5799999999998874 334 88999 667
Q ss_pred CCHHhHhccCCCCCCCHHHHHHHHHHHHHHH-HHHHhCCCcccccCCCCCeeecC----CCCeEEccccc
Q 014478 70 ETLAKHLFHWETQPMKWAMRLRVALYLAQAL-EYCSSKGRALYHDLNAYRILFDK----DGNPRLSSFGL 134 (424)
Q Consensus 70 gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L-~~lH~~~~ivH~dikp~Nill~~----~~~~kl~Dfg~ 134 (424)
|||.+++.+ ..+++. ..++.|++.++ +|||+++ |+||||||+|||++. ++.++|+||+.
T Consensus 92 ~tL~~~l~~---~~~~e~--~~~~~~~L~~l~~yLh~~~-IvhrDlKp~NILl~~~~~~~~~~~LiDg~G 155 (210)
T PRK10345 92 ITLTEFAEQ---CRYEED--VAQLRQLLKKLKRYLLDNR-IVTMELKPQNILCQRISESEVIPVVCDNIG 155 (210)
T ss_pred hhHHHHHHc---ccccHh--HHHHHHHHHHHHHHHHHCC-EeecCCCHHHEEEeccCCCCCcEEEEECCC
Confidence 999999954 346555 46688888888 9999999 999999999999964 34799999543
|
|
| >KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.77 E-value=1.6e-19 Score=181.07 Aligned_cols=228 Identities=14% Similarity=0.112 Sum_probs=157.4
Q ss_pred ccceeeeecceecccccCCCc--hhhhHHHHHHHH--HhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHhHhccCCC
Q 014478 6 SKFSICWFHCHLKSSVLESSD--LGETLNLEEAKA--VGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWET 81 (424)
Q Consensus 6 ~v~~~~~~~~~v~~~~~~~~~--~~~~~~~~E~~~--l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~ 81 (424)
.|+++....-.|.+||+.+.. ...+.|.++++- ...+++||++.+.-+-..++-.|||-+|+.+ +|.|.+.. +
T Consensus 38 Kv~r~k~~eG~vVvKVFvk~~p~~sL~~~~qrL~~ik~~l~~~pn~lPfqk~~~t~kAAylvRqyvkh-nLyDRlST--R 114 (1431)
T KOG1240|consen 38 KVARAKDREGLVVVKVFVKQDPTISLRPFKQRLEEIKFALMKAPNCLPFQKVLVTDKAAYLVRQYVKH-NLYDRLST--R 114 (1431)
T ss_pred hhhhccCCCceEEEEEEeccCCCCCchHHHHHHHHHHHHhhcCCcccchHHHHHhhHHHHHHHHHHhh-hhhhhhcc--c
Confidence 344555533346666664433 445555554433 4445899999998887777778899999966 99999953 4
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCC----Cc-------cccCccC
Q 014478 82 QPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG----KS-------YSTNLAF 150 (424)
Q Consensus 82 ~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~----~~-------~~gt~~y 150 (424)
.-+...+...|+.|++.||.-+|..| |.|||||.+||||+.-..+-|+||-..+-.--. .. ......|
T Consensus 115 PFL~~iEKkWiaFQLL~al~qcH~~g-VcHGDIKsENILiTSWNW~~LtDFAsFKPtYLPeDNPadf~fFFDTSrRRtCY 193 (1431)
T KOG1240|consen 115 PFLVLIEKKWIAFQLLKALSQCHKLG-VCHGDIKSENILITSWNWLYLTDFASFKPTYLPEDNPADFTFFFDTSRRRTCY 193 (1431)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHcC-ccccccccceEEEeeechhhhhcccccCCccCCCCCcccceEEEecCCceeee
Confidence 44667788889999999999999999 999999999999998888999999765532211 11 1123579
Q ss_pred CCccccccC----------C-CCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHHHHH
Q 014478 151 TPPEYMRTG----------R-VTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVR 219 (424)
Q Consensus 151 ~aPE~~~~~----------~-~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 219 (424)
.|||.+... + .+++-||||+||++.||++-..|...- .....-+.............++ ...+++
T Consensus 194 iAPERFv~~~~~~~~~q~~~~L~paMDIFS~GCViaELf~Eg~PlF~L-SQL~aYr~~~~~~~e~~Le~Ie---d~~~Rn 269 (1431)
T KOG1240|consen 194 IAPERFVSALGKTSVGQDAPLLTPAMDIFSAGCVIAELFLEGRPLFTL-SQLLAYRSGNADDPEQLLEKIE---DVSLRN 269 (1431)
T ss_pred cChHhhhccccccccCCcccccChhhhhhhhhHHHHHHHhcCCCcccH-HHHHhHhccCccCHHHHHHhCc---CccHHH
Confidence 999987541 2 677899999999999998864443321 1111111110000000001111 236899
Q ss_pred HHHHhcccCcCCCCCHHHHHHH
Q 014478 220 LASRCLQSEARERPNAKSLVIS 241 (424)
Q Consensus 220 li~~cl~~dp~~Rps~~~~~~~ 241 (424)
+|..|++.||.+|.|+++.++.
T Consensus 270 lil~Mi~rdPs~RlSAedyL~~ 291 (1431)
T KOG1240|consen 270 LILSMIQRDPSKRLSAEDYLQK 291 (1431)
T ss_pred HHHHHHccCchhccCHHHHHHh
Confidence 9999999999999999999876
|
|
| >PRK14879 serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.73 E-value=1.4e-17 Score=146.98 Aligned_cols=128 Identities=14% Similarity=0.158 Sum_probs=107.7
Q ss_pred CCCcccceeeeecceecccccCCCch---------hhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCH
Q 014478 2 GGRCSKFSICWFHCHLKSSVLESSDL---------GETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETL 72 (424)
Q Consensus 2 G~~g~v~~~~~~~~~v~~~~~~~~~~---------~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL 72 (424)
|++|.||.+.+.+..+.+|+...... ....+.+|++++..+.|++|+....++......+++|||++|++|
T Consensus 7 G~~~~vy~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~~~G~~L 86 (211)
T PRK14879 7 GAEAEIYLGDFLGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAGVNVPAVYFVDPENFIIVMEYIEGEPL 86 (211)
T ss_pred CceEEEEEEeeCCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHCCCCCCeEEEEeCCCCEEEEEEeCCcCH
Confidence 88999999999888777776543211 134678899999999999988777777777778999999999999
Q ss_pred HhHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEcccccccc
Q 014478 73 AKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKN 137 (424)
Q Consensus 73 ~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~ 137 (424)
.+++... .. ....++.+++.+|.++|+.+ ++|||++|.|||++ ++.++|+|||.+..
T Consensus 87 ~~~~~~~-----~~-~~~~i~~~i~~~l~~lH~~~-i~H~Dl~p~Nil~~-~~~~~liDf~~a~~ 143 (211)
T PRK14879 87 KDLINSN-----GM-EELELSREIGRLVGKLHSAG-IIHGDLTTSNMILS-GGKIYLIDFGLAEF 143 (211)
T ss_pred HHHHHhc-----cH-HHHHHHHHHHHHHHHHHhCC-cccCCCCcccEEEE-CCCEEEEECCcccC
Confidence 9998531 12 88899999999999999999 99999999999999 78899999998765
|
|
| >TIGR03724 arch_bud32 Kae1-associated kinase Bud32 | Back alignment and domain information |
|---|
Probab=99.72 E-value=1.6e-17 Score=145.11 Aligned_cols=125 Identities=14% Similarity=0.163 Sum_probs=102.5
Q ss_pred CCCcccceeeeecceecccccCCCc---------hhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCH
Q 014478 2 GGRCSKFSICWFHCHLKSSVLESSD---------LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETL 72 (424)
Q Consensus 2 G~~g~v~~~~~~~~~v~~~~~~~~~---------~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL 72 (424)
|++|.||++.|.+..+.+|+..... .....+.+|++++..+.|+++.....++...+..++||||++|++|
T Consensus 5 G~~~~vy~~~~~~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~~~g~~l 84 (199)
T TIGR03724 5 GAEAIIYLGDFLGLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGVNTPVVYDVDPDNKTIVMEYIEGKPL 84 (199)
T ss_pred CceEEEEEeecCCccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEEECCccH
Confidence 8999999999988787777654321 1135677899999999988766555555666677999999999999
Q ss_pred HhHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEcccccccc
Q 014478 73 AKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKN 137 (424)
Q Consensus 73 ~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~ 137 (424)
.+++... .. .++.+++.+|.+||+.+ ++|||++|.||+++ ++.++++|||++..
T Consensus 85 ~~~~~~~--~~-------~~~~~i~~~l~~lH~~g-i~H~Dl~~~Nil~~-~~~~~liDfg~a~~ 138 (199)
T TIGR03724 85 KDVIEEG--ND-------ELLREIGRLVGKLHKAG-IVHGDLTTSNIIVR-DDKLYLIDFGLGKY 138 (199)
T ss_pred HHHHhhc--HH-------HHHHHHHHHHHHHHHCC-eecCCCCcceEEEE-CCcEEEEECCCCcC
Confidence 9987431 11 78999999999999999 99999999999999 88999999998765
|
Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine. |
| >PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated | Back alignment and domain information |
|---|
Probab=99.71 E-value=3.2e-17 Score=164.29 Aligned_cols=125 Identities=16% Similarity=0.164 Sum_probs=104.0
Q ss_pred CCCcccceeeeecceecccccCCC-----c----hhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCH
Q 014478 2 GGRCSKFSICWFHCHLKSSVLESS-----D----LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETL 72 (424)
Q Consensus 2 G~~g~v~~~~~~~~~v~~~~~~~~-----~----~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL 72 (424)
|++|.||++.+.+..+.+++.... . ...+.+.+|++++..++|++|+....++......++||||++|++|
T Consensus 344 G~~g~Vy~~~~~~~~~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~E~~~g~~L 423 (535)
T PRK09605 344 GAEADIKKGEYLGRDAVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRAGVPTPVIYDVDPEEKTIVMEYIGGKDL 423 (535)
T ss_pred CCcEEEEEEeecCccceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhcccCCCeeEEEEEeCCCCEEEEEecCCCcH
Confidence 899999999886665544332111 0 1235688999999999999999888888777778999999999999
Q ss_pred HhHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccC
Q 014478 73 AKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNS 138 (424)
Q Consensus 73 ~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~ 138 (424)
.+++. ....++.+++.+|.+||+.+ ++||||||+|||+ .++.++|+|||+++..
T Consensus 424 ~~~l~----------~~~~~~~~i~~~L~~lH~~g-iiHrDlkp~NILl-~~~~~~liDFGla~~~ 477 (535)
T PRK09605 424 KDVLE----------GNPELVRKVGEIVAKLHKAG-IVHGDLTTSNFIV-RDDRLYLIDFGLGKYS 477 (535)
T ss_pred HHHHH----------HHHHHHHHHHHHHHHHHhCC-CccCCCChHHEEE-ECCcEEEEeCcccccC
Confidence 99883 45689999999999999999 9999999999999 5788999999998764
|
|
| >KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only] | Back alignment and domain information |
|---|
Probab=99.71 E-value=1.3e-17 Score=167.18 Aligned_cols=132 Identities=20% Similarity=0.199 Sum_probs=105.9
Q ss_pred HHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCC-------------------CCccccCccCCCccccc
Q 014478 97 AQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRD-------------------GKSYSTNLAFTPPEYMR 157 (424)
Q Consensus 97 ~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~-------------------~~~~~gt~~y~aPE~~~ 157 (424)
+.+++|+|+.+ |+|||+||+|.+|..-|++|++|||+++.... ....+||+.|.|||++.
T Consensus 153 vla~Eylh~yg-ivhrdlkpdnllIT~mGhiKlTDfgLsk~GLms~atnl~eg~I~k~t~Ef~dKqvcgTPeyiaPeVil 231 (1205)
T KOG0606|consen 153 VLAVEYLHSYG-IVHRDLKPDNLLITSMGHIKLTDFGLSKKGLMSLATNLKEGHIEKDTHEFQDKQVCGTPEYIAPEVIL 231 (1205)
T ss_pred hHHhHhhccCC-eecCCCCCCcceeeecccccccchhhhhhhhhhccchhhhcchHHHHHHhhhccccCCccccChhhhh
Confidence 78899999999 99999999999999999999999999875321 12237899999999999
Q ss_pred cCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHHHHHHHHHhcccCcCCC
Q 014478 158 TGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARER 232 (424)
Q Consensus 158 ~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~R 232 (424)
...|....|.|++|+++||.+.|..||.++..+..-..-+. +.....+-....+++.+++|.++|+.+|..|
T Consensus 232 rqgygkpvdwwamGiIlyeFLVgcvpffGdtpeelfg~vis---d~i~wpE~dea~p~Ea~dli~~LL~qnp~~R 303 (1205)
T KOG0606|consen 232 RQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEELFGQVIS---DDIEWPEEDEALPPEAQDLIEQLLRQNPLCR 303 (1205)
T ss_pred hhccCCCccHHHHHHHHHHHheeeeeccCCCHHHHHhhhhh---hhccccccCcCCCHHHHHHHHHHHHhChHhh
Confidence 88999999999999999999999999988632222221111 1111122244568899999999999999999
|
|
| >smart00090 RIO RIO-like kinase | Back alignment and domain information |
|---|
Probab=99.69 E-value=7.6e-17 Score=143.76 Aligned_cols=132 Identities=14% Similarity=0.138 Sum_probs=102.3
Q ss_pred CCCcccceee---eecceecccccCCCch-------------------------hhhHHHHHHHHHhcCCC--cCcceeE
Q 014478 2 GGRCSKFSIC---WFHCHLKSSVLESSDL-------------------------GETLNLEEAKAVGNLRS--ERLANLI 51 (424)
Q Consensus 2 G~~g~v~~~~---~~~~~v~~~~~~~~~~-------------------------~~~~~~~E~~~l~~l~h--~~iv~~~ 51 (424)
|++|.||.+. ..+..|++|++..... ....+.+|++.+.++.+ ..+++++
T Consensus 39 G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~L~~~~i~~p~~~ 118 (237)
T smart00090 39 GKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQRLYEAGVPVPKPI 118 (237)
T ss_pred CcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCeee
Confidence 8999999998 3678888887753321 11235689999999975 3345555
Q ss_pred EEEEeCCeeeEEEecCCCCCHHhHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEcc
Q 014478 52 GCCYEADERLLVAEFMPNETLAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSS 131 (424)
Q Consensus 52 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~D 131 (424)
+. ...++||||++|++|...... ...+...++..++.|++.+|.+||+.+.++||||||+||+++ ++.++|+|
T Consensus 119 ~~----~~~~lV~E~~~g~~L~~~~~~--~~~~~~~~~~~i~~qi~~~l~~LH~~g~iiH~Dikp~NIli~-~~~i~LiD 191 (237)
T smart00090 119 AW----RRNVLVMEFIGGDGLPAPRLK--DVEPEEEEEFELYDDILEEMRKLYKEGELVHGDLSEYNILVH-DGKVVIID 191 (237)
T ss_pred Ee----cCceEEEEEecCCcccccccc--cCCcchHHHHHHHHHHHHHHHHHHhcCCEEeCCCChhhEEEE-CCCEEEEE
Confidence 43 234899999999888776532 345666778899999999999999997799999999999999 88999999
Q ss_pred ccccccCCC
Q 014478 132 FGLMKNSRD 140 (424)
Q Consensus 132 fg~~~~~~~ 140 (424)
||.+.....
T Consensus 192 Fg~a~~~~~ 200 (237)
T smart00090 192 VSQSVELDH 200 (237)
T ss_pred ChhhhccCC
Confidence 998775443
|
|
| >PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed | Back alignment and domain information |
|---|
Probab=99.68 E-value=2.6e-16 Score=140.64 Aligned_cols=129 Identities=19% Similarity=0.158 Sum_probs=99.3
Q ss_pred CCCcccceeeeecceecccccCC--------------CchhhhHHHHHHHHHhcCCCcCc--ceeEEEEEeCCe----ee
Q 014478 2 GGRCSKFSICWFHCHLKSSVLES--------------SDLGETLNLEEAKAVGNLRSERL--ANLIGCCYEADE----RL 61 (424)
Q Consensus 2 G~~g~v~~~~~~~~~v~~~~~~~--------------~~~~~~~~~~E~~~l~~l~h~~i--v~~~~~~~~~~~----~~ 61 (424)
||.|+||.....+..++++.... +......+.+|++++..|.|++| +..++++..... .+
T Consensus 43 ~g~gtv~~v~~~~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~gi~vP~pl~~~~~~~~~~~~~~ 122 (239)
T PRK01723 43 KGRGTTWFVQTPGVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAGLPVPRPIAARVVRHGLFYRAD 122 (239)
T ss_pred CCCccEEEEEeCCceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhCCCCCceeEeeeeeecCcceeee
Confidence 78999998776665655544421 11234577889999999988774 777777544322 35
Q ss_pred EEEecCCC-CCHHhHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccC
Q 014478 62 LVAEFMPN-ETLAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNS 138 (424)
Q Consensus 62 lv~e~~~~-gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~ 138 (424)
+|||+++| .+|.+++.. .+++.. .+.+++.+|.+||++| |+||||||.|||++.++.++|+|||.+...
T Consensus 123 lV~e~l~G~~~L~~~l~~---~~l~~~----~~~~i~~~l~~lH~~G-I~HrDlkp~NILv~~~~~v~LIDfg~~~~~ 192 (239)
T PRK01723 123 ILIERIEGARDLVALLQE---APLSEE----QWQAIGQLIARFHDAG-VYHADLNAHNILLDPDGKFWLIDFDRGELR 192 (239)
T ss_pred EEEEecCCCCCHHHHHhc---CCCCHH----HHHHHHHHHHHHHHCC-CCCCCCCchhEEEcCCCCEEEEECCCcccC
Confidence 99999997 699998843 345544 3678999999999999 999999999999998899999999987764
|
|
| >KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.68 E-value=7.2e-17 Score=164.70 Aligned_cols=230 Identities=14% Similarity=0.133 Sum_probs=162.4
Q ss_pred CCCcccceeee-ecceecccccCCCchhhhHHHHHHHHHhcCC---CcCcceeEEEEEeCCeeeEEEecCCCCCHHhHhc
Q 014478 2 GGRCSKFSICW-FHCHLKSSVLESSDLGETLNLEEAKAVGNLR---SERLANLIGCCYEADERLLVAEFMPNETLAKHLF 77 (424)
Q Consensus 2 G~~g~v~~~~~-~~~~v~~~~~~~~~~~~~~~~~E~~~l~~l~---h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~ 77 (424)
||+|.||.+.. .+..++.|+-.+..- .+|.-=.+++.+|+ -+-|..+.......+.-+||+||.+.|||.+++.
T Consensus 709 g~y~~vy~a~~~~~~~~alK~e~P~~~--WEfYI~~q~~~RLk~~~~~~~~~~~~a~~~~~~S~lv~ey~~~Gtlld~~N 786 (974)
T KOG1166|consen 709 GSYGSVYVATHSNGKLVALKVEKPPNP--WEFYICLQVMERLKPQMLPSIMHISSAHVFQNASVLVSEYSPYGTLLDLIN 786 (974)
T ss_pred ccceEEEEeecCCCcEEEEEeecCCCc--eeeeehHHHHHhhchhhhcchHHHHHHHccCCcceeeeeccccccHHHhhc
Confidence 89999999987 445555555444432 23333344555555 2335555555555566789999999999999996
Q ss_pred cCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecC-------CCCeEEccccccccCC---CCCc---c
Q 014478 78 HWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDK-------DGNPRLSSFGLMKNSR---DGKS---Y 144 (424)
Q Consensus 78 ~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~-------~~~~kl~Dfg~~~~~~---~~~~---~ 144 (424)
....+++..+..++.|++..+++||..+ |||+||||+|+||.. +..++|+|||.+.... ++.. .
T Consensus 787 --~~~~m~e~lv~~~~~qml~ive~lH~~~-IIHgDiKPDNfll~~~~~~~~~~~~l~lIDfG~siDm~lfp~~~~F~~~ 863 (974)
T KOG1166|consen 787 --TNKVMDEYLVMFFSCQMLRIVEHLHAMG-IIHGDIKPDNFLLRREICADSDSKGLYLIDFGRSIDMKLFPDGTKFKAV 863 (974)
T ss_pred --cCCCCCchhhhHHHHHHHHHHHHHHhcc-eecccCCcceeEeecccCCCCcccceEEEecccceeeeEcCCCcEEeee
Confidence 4678999999999999999999999999 999999999999932 2358999999876433 3333 3
Q ss_pred ccCccCCCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHH-HHHHHHH
Q 014478 145 STNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTE-LVRLASR 223 (424)
Q Consensus 145 ~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-l~~li~~ 223 (424)
.+|-.+-.+|+..|.+++...|.|.|+.+++-|+.|+..- ...+.. +.+... ++.-.-.+ .-+|+.+
T Consensus 864 ~~td~f~C~EM~~grpWtYq~DyfGlAa~~h~mLFG~y~q------~~~g~~--~~~~~~----~~Ry~~~~~W~~~F~~ 931 (974)
T KOG1166|consen 864 WHTDLFDCIEMREGRPWTYQIDYFGLAATVHVMLFGKYME------VKNGSS--WMVKTN----FPRYWKRDMWNKFFDL 931 (974)
T ss_pred eccccchhHHHhcCCCCchhhhhHHHHHHHHHHHHHHHHH------hcCCcc--eecccc----chhhhhHHHHHHHHHH
Confidence 4678899999999999999999999999999999997321 011100 011111 11111223 3477778
Q ss_pred hcccCcCCCCCHHHHHHHHHHHhhh
Q 014478 224 CLQSEARERPNAKSLVISLMSLQKE 248 (424)
Q Consensus 224 cl~~dp~~Rps~~~~~~~l~~~~~~ 248 (424)
+|..|-..=|...++...++....+
T Consensus 932 lLN~~~~~~p~l~~lr~~~~~~~~~ 956 (974)
T KOG1166|consen 932 LLNPDCDTLPNLQELRTELEEVLAE 956 (974)
T ss_pred HhCcCcccchhHHHHHHHHHHHHHH
Confidence 8885555558888888888776654
|
|
| >KOG0548 consensus Molecular co-chaperone STI1 [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=99.66 E-value=3.5e-16 Score=146.25 Aligned_cols=103 Identities=23% Similarity=0.376 Sum_probs=99.8
Q ss_pred HHHHHHHHhHHHhhCCHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhcCCCchHHHHHHHHHH
Q 014478 319 TLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAACL 398 (424)
Q Consensus 319 ~~~~~~~g~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~ 398 (424)
+...+.+|+.+|+.|+|..|+..|++||+.+|+ ++.+|.|||.||.+++.+.+|+.+++++|+++|++.++|++.|.++
T Consensus 358 A~e~r~kGne~Fk~gdy~~Av~~YteAIkr~P~-Da~lYsNRAac~~kL~~~~~aL~Da~~~ieL~p~~~kgy~RKg~al 436 (539)
T KOG0548|consen 358 AEEEREKGNEAFKKGDYPEAVKHYTEAIKRDPE-DARLYSNRAACYLKLGEYPEALKDAKKCIELDPNFIKAYLRKGAAL 436 (539)
T ss_pred HHHHHHHHHHHHhccCHHHHHHHHHHHHhcCCc-hhHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCchHHHHHHHHHHHH
Confidence 667788899999999999999999999999999 9999999999999999999999999999999999999999999999
Q ss_pred HhCCChHHHHHHHHHHHhchhhcC
Q 014478 399 FSLGMENDARETLKDGTNLEAKKN 422 (424)
Q Consensus 399 ~~~~~~~~A~~~~~~al~l~~~~~ 422 (424)
..+++|+.|++.|++++++||++.
T Consensus 437 ~~mk~ydkAleay~eale~dp~~~ 460 (539)
T KOG0548|consen 437 RAMKEYDKALEAYQEALELDPSNA 460 (539)
T ss_pred HHHHHHHHHHHHHHHHHhcCchhH
Confidence 999999999999999999999753
|
|
| >cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain | Back alignment and domain information |
|---|
Probab=99.66 E-value=3.3e-16 Score=136.65 Aligned_cols=127 Identities=14% Similarity=0.115 Sum_probs=99.2
Q ss_pred CCCCcccceeee-ecceecccccCCCch-----------------------hhhHHHHHHHHHhcCCCc--CcceeEEEE
Q 014478 1 MGGRCSKFSICW-FHCHLKSSVLESSDL-----------------------GETLNLEEAKAVGNLRSE--RLANLIGCC 54 (424)
Q Consensus 1 ~G~~g~v~~~~~-~~~~v~~~~~~~~~~-----------------------~~~~~~~E~~~l~~l~h~--~iv~~~~~~ 54 (424)
.|++|.||.+.+ .+..+++|++..... ....+..|+.++..+.|+ .++..++.
T Consensus 25 ~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~v~~~~~~- 103 (198)
T cd05144 25 VGKESDVYLALDPDGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALKALYEEGFPVPKPIDW- 103 (198)
T ss_pred cCcceEEEEEEcCCCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHHHHHHcCCCCCceeec-
Confidence 389999999988 577888887543220 112366789999999777 45555543
Q ss_pred EeCCeeeEEEecCCCCCHHhHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccc
Q 014478 55 YEADERLLVAEFMPNETLAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGL 134 (424)
Q Consensus 55 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~ 134 (424)
...++||||++|++|...... .....++.+++.++.++|+.+ ++||||||+||+++.++.++|+|||+
T Consensus 104 ---~~~~lv~e~~~g~~L~~~~~~--------~~~~~~~~~i~~~l~~lh~~g-i~H~Dl~p~Nill~~~~~~~liDfg~ 171 (198)
T cd05144 104 ---NRHAVVMEYIDGVELYRVRVL--------EDPEEVLDEILEEIVKAYKHG-IIHGDLSEFNILVDDDEKIYIIDWPQ 171 (198)
T ss_pred ---CCceEEEEEeCCcchhhcccc--------ccHHHHHHHHHHHHHHHHHCC-CCcCCCCcccEEEcCCCcEEEEECCc
Confidence 345899999999999775421 345678999999999999999 99999999999999999999999999
Q ss_pred cccCCC
Q 014478 135 MKNSRD 140 (424)
Q Consensus 135 ~~~~~~ 140 (424)
+.....
T Consensus 172 ~~~~~~ 177 (198)
T cd05144 172 MVSTDH 177 (198)
T ss_pred cccCCC
Confidence 865543
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom |
| >KOG4234 consensus TPR repeat-containing protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.65 E-value=1e-15 Score=125.67 Aligned_cols=109 Identities=17% Similarity=0.253 Sum_probs=101.5
Q ss_pred HhHHHHHHHHHHHhHHHhhCCHHHHHHHHHHHhcCCCCC----CHHHHHHHHHHHHhcCChHHHHHHHHHHHhcCCCchH
Q 014478 314 SQMQETLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMV----SPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPT 389 (424)
Q Consensus 314 ~~~~~~~~~~~~g~~~~~~g~~~~A~~~~~~ai~~~p~~----~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~ 389 (424)
+....+..++..|+.+|+.|+|++|...|..||...|.. ..-+|.|+|.|+++++.++.|+.++.+||+++|.+-+
T Consensus 90 k~~~kad~lK~EGN~~F~ngdyeeA~skY~~Ale~cp~~~~e~rsIly~Nraaa~iKl~k~e~aI~dcsKaiel~pty~k 169 (271)
T KOG4234|consen 90 KAIEKADSLKKEGNELFKNGDYEEANSKYQEALESCPSTSTEERSILYSNRAAALIKLRKWESAIEDCSKAIELNPTYEK 169 (271)
T ss_pred HHHHHHHHHHHHHHHhhhcccHHHHHHHHHHHHHhCccccHHHHHHHHhhhHHHHHHhhhHHHHHHHHHhhHhcCchhHH
Confidence 345678899999999999999999999999999999972 2468999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhCCChHHHHHHHHHHHhchhhcC
Q 014478 390 ALYLQAACLFSLGMENDARETLKDGTNLEAKKN 422 (424)
Q Consensus 390 a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~~ 422 (424)
|+.++|.+|.++.+|++|+.+|++.+++||+++
T Consensus 170 Al~RRAeayek~ek~eealeDyKki~E~dPs~~ 202 (271)
T KOG4234|consen 170 ALERRAEAYEKMEKYEEALEDYKKILESDPSRR 202 (271)
T ss_pred HHHHHHHHHHhhhhHHHHHHHHHHHHHhCcchH
Confidence 999999999999999999999999999999854
|
|
| >KOG0548 consensus Molecular co-chaperone STI1 [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=99.64 E-value=5.7e-16 Score=144.89 Aligned_cols=103 Identities=27% Similarity=0.445 Sum_probs=99.9
Q ss_pred HHHHHHHHhHHHhhCCHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhcCCCchHHHHHHHHHH
Q 014478 319 TLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAACL 398 (424)
Q Consensus 319 ~~~~~~~g~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~ 398 (424)
+..++.+|+.++..|+|+.|+..|++||.++|. +...|.|++.+|..+|+|++|+++..+.++++|+++++|.++|.++
T Consensus 2 a~e~k~kgnaa~s~~d~~~ai~~~t~ai~l~p~-nhvlySnrsaa~a~~~~~~~al~da~k~~~l~p~w~kgy~r~Gaa~ 80 (539)
T KOG0548|consen 2 AVELKEKGNAAFSSGDFETAIRLFTEAIMLSPT-NHVLYSNRSAAYASLGSYEKALKDATKTRRLNPDWAKGYSRKGAAL 80 (539)
T ss_pred hhHHHHHHHhhcccccHHHHHHHHHHHHccCCC-ccchhcchHHHHHHHhhHHHHHHHHHHHHhcCCchhhHHHHhHHHH
Confidence 456789999999999999999999999999999 9999999999999999999999999999999999999999999999
Q ss_pred HhCCChHHHHHHHHHHHhchhhcC
Q 014478 399 FSLGMENDARETLKDGTNLEAKKN 422 (424)
Q Consensus 399 ~~~~~~~~A~~~~~~al~l~~~~~ 422 (424)
..+|+|++|+..|.++|+.||++.
T Consensus 81 ~~lg~~~eA~~ay~~GL~~d~~n~ 104 (539)
T KOG0548|consen 81 FGLGDYEEAILAYSEGLEKDPSNK 104 (539)
T ss_pred HhcccHHHHHHHHHHHhhcCCchH
Confidence 999999999999999999999864
|
|
| >PRK15359 type III secretion system chaperone protein SscB; Provisional | Back alignment and domain information |
|---|
Probab=99.64 E-value=2.8e-15 Score=123.17 Aligned_cols=99 Identities=16% Similarity=0.208 Sum_probs=95.8
Q ss_pred HHHHHhHHHhhCCHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhcCCCchHHHHHHHHHHHhC
Q 014478 322 SKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAACLFSL 401 (424)
Q Consensus 322 ~~~~g~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~~ 401 (424)
+...|..+++.|++++|+..|.+++..+|. +..+|.++|.++..+|++++|+..|++|++++|+++.+++++|.++..+
T Consensus 27 ~~~~g~~~~~~g~~~~A~~~~~~al~~~P~-~~~a~~~lg~~~~~~g~~~~A~~~y~~Al~l~p~~~~a~~~lg~~l~~~ 105 (144)
T PRK15359 27 VYASGYASWQEGDYSRAVIDFSWLVMAQPW-SWRAHIALAGTWMMLKEYTTAINFYGHALMLDASHPEPVYQTGVCLKMM 105 (144)
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHcCCC-cHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHc
Confidence 446799999999999999999999999999 9999999999999999999999999999999999999999999999999
Q ss_pred CChHHHHHHHHHHHhchhhc
Q 014478 402 GMENDARETLKDGTNLEAKK 421 (424)
Q Consensus 402 ~~~~~A~~~~~~al~l~~~~ 421 (424)
|++++|+..|++|++++|.+
T Consensus 106 g~~~eAi~~~~~Al~~~p~~ 125 (144)
T PRK15359 106 GEPGLAREAFQTAIKMSYAD 125 (144)
T ss_pred CCHHHHHHHHHHHHHhCCCC
Confidence 99999999999999999975
|
|
| >cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family | Back alignment and domain information |
|---|
Probab=99.63 E-value=5.4e-16 Score=128.97 Aligned_cols=129 Identities=14% Similarity=0.030 Sum_probs=107.5
Q ss_pred CCCcccceeeeecceecccccCCCchhhhHHHHHHHHHhcCCC--cCcceeEEEEEeCCeeeEEEecCCCCCHHhHhccC
Q 014478 2 GGRCSKFSICWFHCHLKSSVLESSDLGETLNLEEAKAVGNLRS--ERLANLIGCCYEADERLLVAEFMPNETLAKHLFHW 79 (424)
Q Consensus 2 G~~g~v~~~~~~~~~v~~~~~~~~~~~~~~~~~E~~~l~~l~h--~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~ 79 (424)
|+++.||.+...+..+.+|....... ...+.+|+.+++.++| .+++++++++...+..+++|||++|+++..+
T Consensus 9 g~~~~v~~~~~~~~~~~iK~~~~~~~-~~~~~~e~~~~~~l~~~~~~~p~~~~~~~~~~~~~~v~e~~~g~~~~~~---- 83 (155)
T cd05120 9 GLTNRVYLLGTKDEDYVLKINPSREK-GADREREVAILQLLARKGLPVPKVLASGESDGWSYLLMEWIEGETLDEV---- 83 (155)
T ss_pred ccccceEEEEecCCeEEEEecCCCCc-hhHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCccEEEEEecCCeecccC----
Confidence 77889999988777777777655443 5678899999999976 5899999998887889999999998777543
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHhC---CCcccccCCCCCeeecCCCCeEEccccccccCCCC
Q 014478 80 ETQPMKWAMRLRVALYLAQALEYCSSK---GRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG 141 (424)
Q Consensus 80 ~~~~l~~~~~~~i~~qi~~~L~~lH~~---~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~ 141 (424)
+......++.+++.+|..+|.. + ++|+|++|+||+++.++.++++|||.+......
T Consensus 84 -----~~~~~~~~~~~~~~~l~~lh~~~~~~-i~H~Dl~~~Nil~~~~~~~~l~Df~~~~~~~~~ 142 (155)
T cd05120 84 -----SEEEKEDIAEQLAELLAKLHQLPLLV-LCHGDLHPGNILVDDGKILGIIDWEYAGYGPPA 142 (155)
T ss_pred -----CHHHHHHHHHHHHHHHHHHhCCCceE-EEecCCCcceEEEECCcEEEEEecccccCCChH
Confidence 5567778899999999999984 6 999999999999998899999999988764433
|
The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves |
| >KOG0543 consensus FKBP-type peptidyl-prolyl cis-trans isomerase [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=99.61 E-value=3.3e-15 Score=136.30 Aligned_cols=114 Identities=19% Similarity=0.291 Sum_probs=101.4
Q ss_pred hhhhhH-hHHHHHHHHHHHhHHHhhCCHHHHHHHHHHHhcCCCCC--------------CHHHHHHHHHHHHhcCChHHH
Q 014478 309 FQMWTS-QMQETLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMV--------------SPTVYARRCLSYLMNDMPQEA 373 (424)
Q Consensus 309 ~~~~~~-~~~~~~~~~~~g~~~~~~g~~~~A~~~~~~ai~~~p~~--------------~~~~~~~~~~~~~~~~~~~~A 373 (424)
+.+... ....+...+..|+.+|+.|+|..|...|++|+..-... ...++.|+|.||+++++|.+|
T Consensus 197 ~~~~~~e~l~~A~~~ke~Gn~~fK~gk~~~A~~~Yerav~~l~~~~~~~~ee~~~~~~~k~~~~lNlA~c~lKl~~~~~A 276 (397)
T KOG0543|consen 197 WKMFAEERLEAADRKKERGNVLFKEGKFKLAKKRYERAVSFLEYRRSFDEEEQKKAEALKLACHLNLAACYLKLKEYKEA 276 (397)
T ss_pred cccchHHHHHHHHHHHHhhhHHHhhchHHHHHHHHHHHHHHhhccccCCHHHHHHHHHHHHHHhhHHHHHHHhhhhHHHH
Confidence 334444 56677889999999999999999999999999764421 136799999999999999999
Q ss_pred HHHHHHHHhcCCCchHHHHHHHHHHHhCCChHHHHHHHHHHHhchhhcC
Q 014478 374 LGDAMQAQVVSPDWPTALYLQAACLFSLGMENDARETLKDGTNLEAKKN 422 (424)
Q Consensus 374 ~~~~~~al~~~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~~ 422 (424)
+..++++|+++|+|.+|+|++|.++..+|+|+.|+.+|++|++++|.|+
T Consensus 277 i~~c~kvLe~~~~N~KALyRrG~A~l~~~e~~~A~~df~ka~k~~P~Nk 325 (397)
T KOG0543|consen 277 IESCNKVLELDPNNVKALYRRGQALLALGEYDLARDDFQKALKLEPSNK 325 (397)
T ss_pred HHHHHHHHhcCCCchhHHHHHHHHHHhhccHHHHHHHHHHHHHhCCCcH
Confidence 9999999999999999999999999999999999999999999999874
|
|
| >KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.61 E-value=1.2e-16 Score=159.81 Aligned_cols=207 Identities=17% Similarity=0.182 Sum_probs=162.2
Q ss_pred HHHHHHHHHhcCC-CcCcceeEEEEEeCCeeeEEEecCCCCCHHhHhccCCCCCCCHHHHHHHHHHHHHHHHHHH-hCCC
Q 014478 31 LNLEEAKAVGNLR-SERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQPMKWAMRLRVALYLAQALEYCS-SKGR 108 (424)
Q Consensus 31 ~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH-~~~~ 108 (424)
....|..+-..+. |+|++++++.....+..++++++.+|+++.+-+........+....-.++.|+..++.|+| ..+
T Consensus 66 ~i~~e~~~~~~~s~h~n~~~~~~~~~~~~~~~~~~~~s~g~~~f~~i~~~~~~~~~~~~~~~~~~ql~s~l~~~H~~~~- 144 (601)
T KOG0590|consen 66 HIDTETDIQKKLSKHSNTVHMIEPSSSPRSYLLSLSYSDGGSLFSKISHPDSTGTSSSSASRYLPQLNSGLSYLHPENG- 144 (601)
T ss_pred hcCccccccccccccccccccCCccCCCcccccccCcccccccccccccCCccCCCCcchhhhhhhhccCccccCcccc-
Confidence 3344777777776 9999999999999999999999999999999883322326677788899999999999999 888
Q ss_pred cccccCCCCCeeecCCC-CeEEccccccccCCC-C------Ccccc-CccCCCccccccC-CCCCCcceehhHHHHHHHh
Q 014478 109 ALYHDLNAYRILFDKDG-NPRLSSFGLMKNSRD-G------KSYST-NLAFTPPEYMRTG-RVTPESVVYSFGTMLLDLL 178 (424)
Q Consensus 109 ivH~dikp~Nill~~~~-~~kl~Dfg~~~~~~~-~------~~~~g-t~~y~aPE~~~~~-~~~~~~Dv~slG~~l~el~ 178 (424)
+.||||||+|.+++.++ ..+++|||++..... . ....| ++.|+|||...+. ...+..|+||.|+++.-++
T Consensus 145 ~~h~~ikP~n~~l~~s~~~l~~~df~~At~~~~~~g~~~~~~~~~g~s~~y~a~E~~~~~~~~~~~~d~~S~g~~l~~~~ 224 (601)
T KOG0590|consen 145 VTHRDIKPSNSLLDESGSALKIADFGLATAYRNKNGAERSLKDRCGSSPPYGAPEHLSGKAYRGPSVDVWSLGIVLSAML 224 (601)
T ss_pred cccCCCCCccchhccCCCcccCCCchhhccccccCCcceeeecccCCCCCCCCcccccchhhcCCCcccccccccccccc
Confidence 99999999999999999 999999999886654 2 12357 9999999999874 4577899999999999999
Q ss_pred hCCCCCCchhhHHHhhhhhhHhhhccc--CCCCCchhHHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 014478 179 SGKHIPPSHALDLIRSKNFLLLMDSAL--EGHFSNDEGTELVRLASRCLQSEARERPNAKSLVIS 241 (424)
Q Consensus 179 ~g~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~~~~~ 241 (424)
+|..|+....... ........... ........+....+++.+++..+|..|.+.+++...
T Consensus 225 ~g~~p~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~k~l~~~~~~r~s~~~~~~d 286 (601)
T KOG0590|consen 225 TGELPWDFPSRKD---GRYSSWKSNKGRFTQLPWNSISDQAHDLLHKILKENPSNRLSIEELKLD 286 (601)
T ss_pred cCCCCcccccccc---ccceeecccccccccCccccCChhhhhcccccccCCchhcccccccccc
Confidence 9998766532222 11111111111 122234456788999999999999999999988754
|
|
| >KOG4648 consensus Uncharacterized conserved protein, contains LRR repeats [Function unknown] | Back alignment and domain information |
|---|
Probab=99.60 E-value=5.4e-15 Score=131.00 Aligned_cols=104 Identities=25% Similarity=0.312 Sum_probs=100.0
Q ss_pred HHHHHHHHHHhHHHhhCCHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhcCCCchHHHHHHHH
Q 014478 317 QETLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAA 396 (424)
Q Consensus 317 ~~~~~~~~~g~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~ 396 (424)
..+.+++++|+.||++|+|++|+.+|.++|..+|. ++.++.|||.+|+++++|..|..+|+.|+.+|-.+.+||.++|.
T Consensus 95 ~~~SEiKE~GN~yFKQgKy~EAIDCYs~~ia~~P~-NpV~~~NRA~AYlk~K~FA~AE~DC~~AiaLd~~Y~KAYSRR~~ 173 (536)
T KOG4648|consen 95 KKASEIKERGNTYFKQGKYEEAIDCYSTAIAVYPH-NPVYHINRALAYLKQKSFAQAEEDCEAAIALDKLYVKAYSRRMQ 173 (536)
T ss_pred HhhHHHHHhhhhhhhccchhHHHHHhhhhhccCCC-CccchhhHHHHHHHHHHHHHHHHhHHHHHHhhHHHHHHHHHHHH
Confidence 44556899999999999999999999999999999 99999999999999999999999999999999999999999999
Q ss_pred HHHhCCChHHHHHHHHHHHhchhhc
Q 014478 397 CLFSLGMENDARETLKDGTNLEAKK 421 (424)
Q Consensus 397 ~~~~~~~~~~A~~~~~~al~l~~~~ 421 (424)
+...+|..+||.++++.+|+|+|++
T Consensus 174 AR~~Lg~~~EAKkD~E~vL~LEP~~ 198 (536)
T KOG4648|consen 174 ARESLGNNMEAKKDCETVLALEPKN 198 (536)
T ss_pred HHHHHhhHHHHHHhHHHHHhhCccc
Confidence 9999999999999999999999974
|
|
| >PRK15363 pathogenicity island 2 chaperone protein SscA; Provisional | Back alignment and domain information |
|---|
Probab=99.60 E-value=1.3e-14 Score=117.08 Aligned_cols=101 Identities=17% Similarity=0.055 Sum_probs=96.7
Q ss_pred HHHHHHHHHHhHHHhhCCHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhcCCCchHHHHHHHH
Q 014478 317 QETLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAA 396 (424)
Q Consensus 317 ~~~~~~~~~g~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~ 396 (424)
+..+.+...|..++..|++++|+..|+.++.++|. +...|+++|.|+..+|+|++|+..|.+|+.++|+++.++++.|.
T Consensus 33 ~~l~~lY~~A~~ly~~G~l~~A~~~f~~L~~~Dp~-~~~y~~gLG~~~Q~~g~~~~AI~aY~~A~~L~~ddp~~~~~ag~ 111 (157)
T PRK15363 33 QPLNTLYRYAMQLMEVKEFAGAARLFQLLTIYDAW-SFDYWFRLGECCQAQKHWGEAIYAYGRAAQIKIDAPQAPWAAAE 111 (157)
T ss_pred HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCcc-cHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCCchHHHHHHH
Confidence 34567778999999999999999999999999999 99999999999999999999999999999999999999999999
Q ss_pred HHHhCCChHHHHHHHHHHHhch
Q 014478 397 CLFSLGMENDARETLKDGTNLE 418 (424)
Q Consensus 397 ~~~~~~~~~~A~~~~~~al~l~ 418 (424)
+++.+|+.++|++.|+.|+..-
T Consensus 112 c~L~lG~~~~A~~aF~~Ai~~~ 133 (157)
T PRK15363 112 CYLACDNVCYAIKALKAVVRIC 133 (157)
T ss_pred HHHHcCCHHHHHHHHHHHHHHh
Confidence 9999999999999999999875
|
|
| >PLN03088 SGT1, suppressor of G2 allele of SKP1; Provisional | Back alignment and domain information |
|---|
Probab=99.60 E-value=8.2e-15 Score=138.69 Aligned_cols=101 Identities=26% Similarity=0.331 Sum_probs=98.0
Q ss_pred HHHHHHHhHHHhhCCHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhcCCCchHHHHHHHHHHH
Q 014478 320 LNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAACLF 399 (424)
Q Consensus 320 ~~~~~~g~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~ 399 (424)
..++.+|+.++..|+|++|++.|++||+++|+ +..+|+++|.+|..+|++++|+.++++|+.++|+++.+|+++|.+|+
T Consensus 3 ~~l~~~a~~a~~~~~~~~Ai~~~~~Al~~~P~-~~~a~~~~a~~~~~~g~~~eAl~~~~~Al~l~P~~~~a~~~lg~~~~ 81 (356)
T PLN03088 3 KDLEDKAKEAFVDDDFALAVDLYTQAIDLDPN-NAELYADRAQANIKLGNFTEAVADANKAIELDPSLAKAYLRKGTACM 81 (356)
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcCCHHHHHHHHHHHH
Confidence 45788999999999999999999999999999 99999999999999999999999999999999999999999999999
Q ss_pred hCCChHHHHHHHHHHHhchhhc
Q 014478 400 SLGMENDARETLKDGTNLEAKK 421 (424)
Q Consensus 400 ~~~~~~~A~~~~~~al~l~~~~ 421 (424)
.+|+|++|+.+|++|++++|.+
T Consensus 82 ~lg~~~eA~~~~~~al~l~P~~ 103 (356)
T PLN03088 82 KLEEYQTAKAALEKGASLAPGD 103 (356)
T ss_pred HhCCHHHHHHHHHHHHHhCCCC
Confidence 9999999999999999999975
|
|
| >KOG1266 consensus Protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.57 E-value=1.7e-15 Score=134.02 Aligned_cols=199 Identities=17% Similarity=0.235 Sum_probs=140.5
Q ss_pred HHHhcCCCcCcceeEEEEEeCC-----eeeEEEecCCCCCHHhHhccC--CCCCCCHHHHHHHHHHHHHHHHHHHhCCC-
Q 014478 37 KAVGNLRSERLANLIGCCYEAD-----ERLLVAEFMPNETLAKHLFHW--ETQPMKWAMRLRVALYLAQALEYCSSKGR- 108 (424)
Q Consensus 37 ~~l~~l~h~~iv~~~~~~~~~~-----~~~lv~e~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~qi~~~L~~lH~~~~- 108 (424)
..|-++.|.|||+++.++.+.. ...+++||+..|+|..+|++. ....+......+|+.||..||.|||+-.|
T Consensus 119 dnllqlvHsnlvkfH~yw~d~K~~e~~rviFiteymssgs~~~fLkrt~~~~~a~~~~~wkkw~tqIlsal~yLhs~~Pp 198 (458)
T KOG1266|consen 119 DNLLQLVHSNLVKFHKYWTDKKYEEKPRVIFITEYMSSGSLKQFLKRTKKNQKALFQKAWKKWCTQILSALSYLHSCDPP 198 (458)
T ss_pred HHHHHHHHHHHHHHHHhhcccccccccceEEEEecccchhHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhccCCc
Confidence 4455667999999999986643 467999999999999999753 23457777888999999999999999764
Q ss_pred cccccCCCCCeeecCCCCeEEccccccccC------C--CCCccccCccCCCccccccCCCCCCcceehhHHHHHHHhhC
Q 014478 109 ALYHDLNAYRILFDKDGNPRLSSFGLMKNS------R--DGKSYSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSG 180 (424)
Q Consensus 109 ivH~dikp~Nill~~~~~~kl~Dfg~~~~~------~--~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g 180 (424)
|+|+++..+-|++..+|-+|+.---..... . +.....+.++|.+||.-.....+..+|||+||+...||..+
T Consensus 199 iihgnlTc~tifiq~ngLIkig~~ap~s~h~s~~~~~~~Ek~~~~~~~g~~a~~sg~~tn~~~a~dIy~fgmcAlemail 278 (458)
T KOG1266|consen 199 IIHGNLTCDTIFIQHNGLIKIGSVAPDSTHPSVNSTREAEKSVNTSLPGFSAPESGTTTNTTGASDIYKFGMCALEMAIL 278 (458)
T ss_pred cccCCcchhheeecCCceEEecccCccccchhhhhhhHhhhhccccCCccccCCcCcccccccchhhhhhhHHHHHHHHh
Confidence 999999999999999998886532111100 0 11123456889999987766788899999999999999888
Q ss_pred CCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHHHHHHHHHhcccCcCCCCCHHHHHHHHH
Q 014478 181 KHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERPNAKSLVISLM 243 (424)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~~~~~l~ 243 (424)
..-+...... ...+ ..+....... ....=+.++.+|+...|..||++++++-|..
T Consensus 279 Eiq~tnseS~-~~~e---e~ia~~i~~l----en~lqr~~i~kcl~~eP~~rp~ar~llfHpl 333 (458)
T KOG1266|consen 279 EIQSTNSESK-VEVE---ENIANVIIGL----ENGLQRGSITKCLEGEPNGRPDARLLLFHPL 333 (458)
T ss_pred eeccCCCcce-eehh---hhhhhheeec----cCccccCcCcccccCCCCCCcchhhhhcCce
Confidence 7432221111 1111 0011100000 0112357888999999999999999987643
|
|
| >KOG0547 consensus Translocase of outer mitochondrial membrane complex, subunit TOM70/TOM72 [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
Probab=99.54 E-value=3e-14 Score=131.72 Aligned_cols=96 Identities=26% Similarity=0.340 Sum_probs=92.4
Q ss_pred HHHHHHHHHHHhHHHhhCCHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhcCCCchHHHHHHH
Q 014478 316 MQETLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQA 395 (424)
Q Consensus 316 ~~~~~~~~~~g~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g 395 (424)
...+..++.+||.+|+.|+|++||++|++||.+.|+ .+..|.|++.||..+|++++.++++.+|++++|++++|+++++
T Consensus 112 ~k~A~~lK~~GN~~f~~kkY~eAIkyY~~AI~l~p~-epiFYsNraAcY~~lgd~~~Vied~TkALEl~P~Y~KAl~RRA 190 (606)
T KOG0547|consen 112 LKYAAALKTKGNKFFRNKKYDEAIKYYTQAIELCPD-EPIFYSNRAACYESLGDWEKVIEDCTKALELNPDYVKALLRRA 190 (606)
T ss_pred HHHHHHHHhhhhhhhhcccHHHHHHHHHHHHhcCCC-CchhhhhHHHHHHHHhhHHHHHHHHHHHhhcCcHHHHHHHHHH
Confidence 466889999999999999999999999999999999 8999999999999999999999999999999999999999999
Q ss_pred HHHHhCCChHHHHHHHH
Q 014478 396 ACLFSLGMENDARETLK 412 (424)
Q Consensus 396 ~~~~~~~~~~~A~~~~~ 412 (424)
.++.++|++++|+.+..
T Consensus 191 ~A~E~lg~~~eal~D~t 207 (606)
T KOG0547|consen 191 SAHEQLGKFDEALFDVT 207 (606)
T ss_pred HHHHhhccHHHHHHhhh
Confidence 99999999999998864
|
|
| >KOG1125 consensus TPR repeat-containing protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.52 E-value=1.2e-13 Score=130.46 Aligned_cols=129 Identities=15% Similarity=0.172 Sum_probs=108.9
Q ss_pred cccccchhHHHHHHHhccccCCcchhhhhhhhhhhHhHHHHHHHHHHHhHHHhhCCHHHHHHHHHHHhcCCCCCCHHHHH
Q 014478 279 ACSRLDLTAIHEILEGMGYKDDEGIANELSFQMWTSQMQETLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYA 358 (424)
Q Consensus 279 ~~~~~~~~~~~~~l~~~g~~~~~~~~~~~s~~~~~~~~~~~~~~~~~g~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~~~ 358 (424)
..+......+.+.|.......... .+++-..-.|..|+-.|+|+.|+.+|+.||...|+ +...|+
T Consensus 404 ~~~~~~l~~i~~~fLeaa~~~~~~--------------~DpdvQ~~LGVLy~ls~efdraiDcf~~AL~v~Pn-d~~lWN 468 (579)
T KOG1125|consen 404 FLDSSHLAHIQELFLEAARQLPTK--------------IDPDVQSGLGVLYNLSGEFDRAVDCFEAALQVKPN-DYLLWN 468 (579)
T ss_pred CCCHHHHHHHHHHHHHHHHhCCCC--------------CChhHHhhhHHHHhcchHHHHHHHHHHHHHhcCCc-hHHHHH
Confidence 334445555666665544333321 12333445788999999999999999999999999 999999
Q ss_pred HHHHHHHhcCChHHHHHHHHHHHhcCCCchHHHHHHHHHHHhCCChHHHHHHHHHHHhchhhcC
Q 014478 359 RRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAACLFSLGMENDARETLKDGTNLEAKKN 422 (424)
Q Consensus 359 ~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~~ 422 (424)
.+|+++....+.++||..|.+|+++.|.+..+.||+|..++.+|.|+||+++|-.||.+.++..
T Consensus 469 RLGAtLAN~~~s~EAIsAY~rALqLqP~yVR~RyNlgIS~mNlG~ykEA~~hlL~AL~mq~ks~ 532 (579)
T KOG1125|consen 469 RLGATLANGNRSEEAISAYNRALQLQPGYVRVRYNLGISCMNLGAYKEAVKHLLEALSMQRKSR 532 (579)
T ss_pred HhhHHhcCCcccHHHHHHHHHHHhcCCCeeeeehhhhhhhhhhhhHHHHHHHHHHHHHhhhccc
Confidence 9999999999999999999999999999999999999999999999999999999999998844
|
|
| >cd05119 RIO RIO kinase family, catalytic domain | Back alignment and domain information |
|---|
Probab=99.51 E-value=2.3e-14 Score=123.89 Aligned_cols=129 Identities=14% Similarity=0.135 Sum_probs=92.0
Q ss_pred CCCcccceeeee-cceecccccCCCchh---hhH----------------------HHHHHHHHhcCCCc--CcceeEEE
Q 014478 2 GGRCSKFSICWF-HCHLKSSVLESSDLG---ETL----------------------NLEEAKAVGNLRSE--RLANLIGC 53 (424)
Q Consensus 2 G~~g~v~~~~~~-~~~v~~~~~~~~~~~---~~~----------------------~~~E~~~l~~l~h~--~iv~~~~~ 53 (424)
|++|.||.+... +..+++|+....... ... ...|.+.+..+.+. .+++.++.
T Consensus 8 G~~g~Vy~a~~~~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~ 87 (187)
T cd05119 8 GKEADVYLALDGDGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEAGVPVPKPIDL 87 (187)
T ss_pred ccceeEEEEECCCCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHcCCCCCceEec
Confidence 899999999875 778888876543211 111 13466666666443 35555544
Q ss_pred EEeCCeeeEEEecCCCCCHHhH-hccCCCCCCCHHHHHHHHHHHHHHHHHHHh-CCCcccccCCCCCeeecCCCCeEEcc
Q 014478 54 CYEADERLLVAEFMPNETLAKH-LFHWETQPMKWAMRLRVALYLAQALEYCSS-KGRALYHDLNAYRILFDKDGNPRLSS 131 (424)
Q Consensus 54 ~~~~~~~~lv~e~~~~gsL~~~-l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~-~~~ivH~dikp~Nill~~~~~~kl~D 131 (424)
...++||||++|+++... +.. .... .++..++.+++.++.++|. .+ ++||||||+||+++ ++.++|+|
T Consensus 88 ----~~~~lv~e~~~g~~~~~~~l~~---~~~~-~~~~~~~~~~~~~l~~lh~~~~-ivH~Dl~p~Nili~-~~~~~liD 157 (187)
T cd05119 88 ----NRHVLVMEFIGGDGIPAPRLKD---VRLL-EDPEELYDQILELMRKLYREAG-LVHGDLSEYNILVD-DGKVYIID 157 (187)
T ss_pred ----CCCEEEEEEeCCCCccChhhhh---hhhc-ccHHHHHHHHHHHHHHHhhccC-cCcCCCChhhEEEE-CCcEEEEE
Confidence 245899999999544321 111 0111 6778999999999999999 88 99999999999999 89999999
Q ss_pred ccccccCCC
Q 014478 132 FGLMKNSRD 140 (424)
Q Consensus 132 fg~~~~~~~ 140 (424)
||.+.....
T Consensus 158 fg~a~~~~~ 166 (187)
T cd05119 158 VPQAVEIDH 166 (187)
T ss_pred CcccccccC
Confidence 999875543
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct |
| >PRK11189 lipoprotein NlpI; Provisional | Back alignment and domain information |
|---|
Probab=99.50 E-value=3.1e-13 Score=125.15 Aligned_cols=104 Identities=11% Similarity=-0.041 Sum_probs=99.5
Q ss_pred HHHHHHHHHHhHHHhhCCHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhcCCCchHHHHHHHH
Q 014478 317 QETLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAA 396 (424)
Q Consensus 317 ~~~~~~~~~g~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~ 396 (424)
..+..+...|..+...|++++|+..|+++++++|+ +..+|+++|.++..+|++++|+..|++|++++|++..+|+++|.
T Consensus 62 ~~a~~~~~~g~~~~~~g~~~~A~~~~~~Al~l~P~-~~~a~~~lg~~~~~~g~~~~A~~~~~~Al~l~P~~~~a~~~lg~ 140 (296)
T PRK11189 62 ERAQLHYERGVLYDSLGLRALARNDFSQALALRPD-MADAYNYLGIYLTQAGNFDAAYEAFDSVLELDPTYNYAYLNRGI 140 (296)
T ss_pred hhHHHHHHHHHHHHHCCCHHHHHHHHHHHHHcCCC-CHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCCHHHHHHHHH
Confidence 34566888999999999999999999999999999 99999999999999999999999999999999999999999999
Q ss_pred HHHhCCChHHHHHHHHHHHhchhhc
Q 014478 397 CLFSLGMENDARETLKDGTNLEAKK 421 (424)
Q Consensus 397 ~~~~~~~~~~A~~~~~~al~l~~~~ 421 (424)
+++.+|++++|++.|+++++++|++
T Consensus 141 ~l~~~g~~~eA~~~~~~al~~~P~~ 165 (296)
T PRK11189 141 ALYYGGRYELAQDDLLAFYQDDPND 165 (296)
T ss_pred HHHHCCCHHHHHHHHHHHHHhCCCC
Confidence 9999999999999999999999975
|
|
| >TIGR02552 LcrH_SycD type III secretion low calcium response chaperone LcrH/SycD | Back alignment and domain information |
|---|
Probab=99.49 E-value=4.4e-13 Score=109.24 Aligned_cols=104 Identities=14% Similarity=0.198 Sum_probs=99.1
Q ss_pred HHHHHHHHHhHHHhhCCHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhcCCCchHHHHHHHHH
Q 014478 318 ETLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAAC 397 (424)
Q Consensus 318 ~~~~~~~~g~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~ 397 (424)
........|..+++.|++++|++.|++++..+|. +..++.++|.++..+|++++|+..++++++.+|+++..++++|.+
T Consensus 16 ~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~p~-~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~la~~ 94 (135)
T TIGR02552 16 QLEQIYALAYNLYQQGRYDEALKLFQLLAAYDPY-NSRYWLGLAACCQMLKEYEEAIDAYALAAALDPDDPRPYFHAAEC 94 (135)
T ss_pred hHHHHHHHHHHHHHcccHHHHHHHHHHHHHhCCC-cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHH
Confidence 4456778999999999999999999999999999 999999999999999999999999999999999999999999999
Q ss_pred HHhCCChHHHHHHHHHHHhchhhcC
Q 014478 398 LFSLGMENDARETLKDGTNLEAKKN 422 (424)
Q Consensus 398 ~~~~~~~~~A~~~~~~al~l~~~~~ 422 (424)
+..+|++++|+..|+++++++|++.
T Consensus 95 ~~~~g~~~~A~~~~~~al~~~p~~~ 119 (135)
T TIGR02552 95 LLALGEPESALKALDLAIEICGENP 119 (135)
T ss_pred HHHcCCHHHHHHHHHHHHHhccccc
Confidence 9999999999999999999999764
|
ScyD/LcrH contains three central tetratricopeptide-like repeats that are predicted to fold into an all-alpha-helical array. |
| >KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.47 E-value=5.2e-14 Score=134.82 Aligned_cols=231 Identities=19% Similarity=0.210 Sum_probs=169.9
Q ss_pred CCCcccceeeee----cceecccc--c-CCCchhhhHHHHHHHHHhcC-CCcCcceeEEEEEeCCeeeEEEecCCCCCHH
Q 014478 2 GGRCSKFSICWF----HCHLKSSV--L-ESSDLGETLNLEEAKAVGNL-RSERLANLIGCCYEADERLLVAEFMPNETLA 73 (424)
Q Consensus 2 G~~g~v~~~~~~----~~~v~~~~--~-~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~ 73 (424)
|++|.+|..... ...+++++ . .........=.+|+...+.+ .|+|.++.+..+..++..++-+|++. .+|.
T Consensus 127 g~~~s~~~~~~~~~~s~~~~a~k~s~~p~s~p~~~~~k~~~~~s~~~i~~~~~~v~~~~~~e~~~~lfiqtE~~~-~sl~ 205 (524)
T KOG0601|consen 127 GSKGSVFKSRCTNSESPHKFAVKKSKIPFSPPLDSKRKLREFLSHHKIDSHENPVRDSPAWEGSGILFIQTELCG-ESLQ 205 (524)
T ss_pred CCCceeecccCCcccCCcccccccccCCCCCccccccccchhhcccccCccccccccCcccccCCcceeeecccc-chhH
Confidence 667777766551 22233332 1 12222334445688888888 59999999999999999999999995 6888
Q ss_pred hHhccCCCCCCCHHHHHHHHHHHHH----HHHHHHhCCCcccccCCCCCeeecCC-CCeEEccccccccCCCCC------
Q 014478 74 KHLFHWETQPMKWAMRLRVALYLAQ----ALEYCSSKGRALYHDLNAYRILFDKD-GNPRLSSFGLMKNSRDGK------ 142 (424)
Q Consensus 74 ~~l~~~~~~~l~~~~~~~i~~qi~~----~L~~lH~~~~ivH~dikp~Nill~~~-~~~kl~Dfg~~~~~~~~~------ 142 (424)
.+... ...-++...++....+... ||.++|..+ ++|-|+||+||++..+ ...+++|||+...+....
T Consensus 206 ~~~~~-~~~~~p~~~l~~~~~~~~~~~~~al~~~hs~~-~~~~~~kp~~i~~~~~~~s~~~~df~~v~~i~~~~~~~~~~ 283 (524)
T KOG0601|consen 206 SYCHT-PCNFLPDNLLWNSLRDWLSRDVTALSHLHSNN-IVHDDLKPANIFTTSDWTSCKLTDFGLVSKISDGNFSSVFK 283 (524)
T ss_pred Hhhhc-ccccCCchhhhhHHhhhhhcccccccccCCCc-ccccccchhheecccccceeecCCcceeEEccCCcccccee
Confidence 88754 2334778888888899888 999999999 9999999999999988 789999999988776543
Q ss_pred ---ccccCccCCCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHHHHH
Q 014478 143 ---SYSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVR 219 (424)
Q Consensus 143 ---~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 219 (424)
...|...|++||..+ +.++..+|+||+|.++.+..++..++..... ..+..+-...+..++....+.++..
T Consensus 284 ~~~r~~~~~~Y~~ke~~~-~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~-----~~W~~~r~~~ip~e~~~~~s~~l~~ 357 (524)
T KOG0601|consen 284 VSKRPEGDCIYAAKELLN-GLATFASDIFSLGEVILEAILGSHLPSVGKN-----SSWSQLRQGYIPLEFCEGGSSSLRS 357 (524)
T ss_pred eeecCCCCceEeChhhhc-cccchHhhhcchhhhhHhhHhhcccccCCCC-----CCccccccccCchhhhcCcchhhhh
Confidence 114677899999988 6788899999999999999888765443211 1111111112333344445667888
Q ss_pred HHHHhcccCcCCCCCHHHHHHH
Q 014478 220 LASRCLQSEARERPNAKSLVIS 241 (424)
Q Consensus 220 li~~cl~~dp~~Rps~~~~~~~ 241 (424)
.+..+++.+|-.|++.+.+..+
T Consensus 358 ~~~~~~d~~~~~~~~~q~~~~l 379 (524)
T KOG0601|consen 358 VTSQMLDEDPRLRLTAQILTAL 379 (524)
T ss_pred HHHHhcCcchhhhhHHHHHhcc
Confidence 9999999999999999887653
|
|
| >PRK10370 formate-dependent nitrite reductase complex subunit NrfG; Provisional | Back alignment and domain information |
|---|
Probab=99.46 E-value=8.9e-13 Score=114.16 Aligned_cols=105 Identities=17% Similarity=0.108 Sum_probs=97.9
Q ss_pred HHHHHHHHHHhHHHhhCCHHHHHHHHHHHhcCCCCCCHHHHHHHHHHH-HhcCC--hHHHHHHHHHHHhcCCCchHHHHH
Q 014478 317 QETLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSY-LMNDM--PQEALGDAMQAQVVSPDWPTALYL 393 (424)
Q Consensus 317 ~~~~~~~~~g~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~-~~~~~--~~~A~~~~~~al~~~p~~~~a~~~ 393 (424)
..+..+...|..+...|++++|+..|++|++++|+ +..++.++|.++ ...|+ +++|...++++++++|+++.++++
T Consensus 71 ~~~~~w~~Lg~~~~~~g~~~~A~~a~~~Al~l~P~-~~~~~~~lA~aL~~~~g~~~~~~A~~~l~~al~~dP~~~~al~~ 149 (198)
T PRK10370 71 QNSEQWALLGEYYLWRNDYDNALLAYRQALQLRGE-NAELYAALATVLYYQAGQHMTPQTREMIDKALALDANEVTALML 149 (198)
T ss_pred CCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHhCCCChhHHHH
Confidence 34567888899999999999999999999999999 999999999985 67787 599999999999999999999999
Q ss_pred HHHHHHhCCChHHHHHHHHHHHhchhhcC
Q 014478 394 QAACLFSLGMENDARETLKDGTNLEAKKN 422 (424)
Q Consensus 394 ~g~~~~~~~~~~~A~~~~~~al~l~~~~~ 422 (424)
+|.+++++|+|++|+.+|+++++++|.+.
T Consensus 150 LA~~~~~~g~~~~Ai~~~~~aL~l~~~~~ 178 (198)
T PRK10370 150 LASDAFMQADYAQAIELWQKVLDLNSPRV 178 (198)
T ss_pred HHHHHHHcCCHHHHHHHHHHHHhhCCCCc
Confidence 99999999999999999999999999754
|
|
| >KOG4626 consensus O-linked N-acetylglucosamine transferase OGT [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.42 E-value=6e-13 Score=126.43 Aligned_cols=101 Identities=13% Similarity=0.097 Sum_probs=94.6
Q ss_pred HHHHHHHHhHHHhhCCHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhcCCCchHHHHHHHHHH
Q 014478 319 TLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAACL 398 (424)
Q Consensus 319 ~~~~~~~g~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~ 398 (424)
+......|..+-++|++++|+.+|.+||++.|. .+.++.|+|.+|..+|+.++|+.+|++||.++|.+++|+.|+|.+|
T Consensus 388 aaa~nNLa~i~kqqgnl~~Ai~~YkealrI~P~-fAda~~NmGnt~ke~g~v~~A~q~y~rAI~~nPt~AeAhsNLasi~ 466 (966)
T KOG4626|consen 388 AAAHNNLASIYKQQGNLDDAIMCYKEALRIKPT-FADALSNMGNTYKEMGDVSAAIQCYTRAIQINPTFAEAHSNLASIY 466 (966)
T ss_pred hhhhhhHHHHHHhcccHHHHHHHHHHHHhcCch-HHHHHHhcchHHHHhhhHHHHHHHHHHHHhcCcHHHHHHhhHHHHh
Confidence 345556788889999999999999999999999 9999999999999999999999999999999999999999999999
Q ss_pred HhCCChHHHHHHHHHHHhchhh
Q 014478 399 FSLGMENDARETLKDGTNLEAK 420 (424)
Q Consensus 399 ~~~~~~~~A~~~~~~al~l~~~ 420 (424)
...|+..+|+..|+.||+++|+
T Consensus 467 kDsGni~~AI~sY~~aLklkPD 488 (966)
T KOG4626|consen 467 KDSGNIPEAIQSYRTALKLKPD 488 (966)
T ss_pred hccCCcHHHHHHHHHHHccCCC
Confidence 9999999999999999999997
|
|
| >PF13414 TPR_11: TPR repeat; PDB: 2HO1_B 2FI7_B 2DBA_A 3Q4A_B 2C2L_D 3Q47_B 3Q49_B 2PL2_B 3IEG_B 2FBN_A | Back alignment and domain information |
|---|
Probab=99.42 E-value=6.5e-13 Score=94.53 Aligned_cols=67 Identities=18% Similarity=0.204 Sum_probs=63.5
Q ss_pred CHHHHHHHHHHHHhcCChHHHHHHHHHHHhcCCCchHHHHHHHHHHHhCC-ChHHHHHHHHHHHhchh
Q 014478 353 SPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAACLFSLG-MENDARETLKDGTNLEA 419 (424)
Q Consensus 353 ~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~~~-~~~~A~~~~~~al~l~~ 419 (424)
++..|.++|.++...|++++|+..|++|++++|+++.+|+++|.++..+| ++++|+++|++|+++||
T Consensus 2 ~a~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~g~~~~~~~~~~~~A~~~~~~al~l~P 69 (69)
T PF13414_consen 2 NAEAWYNLGQIYFQQGDYEEAIEYFEKAIELDPNNAEAYYNLGLAYMKLGKDYEEAIEDFEKALKLDP 69 (69)
T ss_dssp SHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHSTTHHHHHHHHHHHHHHTTTHHHHHHHHHHHHHHHST
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhCccHHHHHHHHHHHHHcCc
Confidence 67889999999999999999999999999999999999999999999999 79999999999999998
|
... |
| >KOG4642 consensus Chaperone-dependent E3 ubiquitin protein ligase (contains TPR repeats) [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=99.41 E-value=6.7e-13 Score=112.25 Aligned_cols=99 Identities=23% Similarity=0.314 Sum_probs=95.4
Q ss_pred HHHHHHHHHhHHHhhCCHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhcCCCchHHHHHHHHH
Q 014478 318 ETLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAAC 397 (424)
Q Consensus 318 ~~~~~~~~g~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~ 397 (424)
.+..++++|+.+|...+|..|+.+|.+||..+|. .+.+|.|++.||+++++++.+..++.+|++++|+.++++|.+|.+
T Consensus 9 ~a~qlkE~gnk~f~~k~y~~ai~~y~raI~~nP~-~~~Y~tnralchlk~~~~~~v~~dcrralql~~N~vk~h~flg~~ 87 (284)
T KOG4642|consen 9 SAEQLKEQGNKCFIPKRYDDAIDCYSRAICINPT-VASYYTNRALCHLKLKHWEPVEEDCRRALQLDPNLVKAHYFLGQW 87 (284)
T ss_pred HHHHHHhccccccchhhhchHHHHHHHHHhcCCC-cchhhhhHHHHHHHhhhhhhhhhhHHHHHhcChHHHHHHHHHHHH
Confidence 4568889999999999999999999999999999 999999999999999999999999999999999999999999999
Q ss_pred HHhCCChHHHHHHHHHHHhc
Q 014478 398 LFSLGMENDARETLKDGTNL 417 (424)
Q Consensus 398 ~~~~~~~~~A~~~~~~al~l 417 (424)
+.+.+.|++|+..+++|..+
T Consensus 88 ~l~s~~~~eaI~~Lqra~sl 107 (284)
T KOG4642|consen 88 LLQSKGYDEAIKVLQRAYSL 107 (284)
T ss_pred HHhhccccHHHHHHHHHHHH
Confidence 99999999999999999655
|
|
| >KOG0550 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=99.38 E-value=1.2e-12 Score=119.10 Aligned_cols=104 Identities=23% Similarity=0.392 Sum_probs=96.8
Q ss_pred HHHHHHHHHHhHHHhhCCHHHHHHHHHHHhcCCCC---CCHHHHHHHHHHHHhcCChHHHHHHHHHHHhcCCCchHHHHH
Q 014478 317 QETLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTM---VSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYL 393 (424)
Q Consensus 317 ~~~~~~~~~g~~~~~~g~~~~A~~~~~~ai~~~p~---~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~ 393 (424)
.....++..|+.+|+.|+|..|.++|+.||.++|+ .+..+|.|+|.+..++|+..+|+.+++.|+.+||.+.+|+.+
T Consensus 247 k~le~~k~~gN~~fk~G~y~~A~E~Yteal~idP~n~~~naklY~nra~v~~rLgrl~eaisdc~~Al~iD~syikall~ 326 (486)
T KOG0550|consen 247 KKLEVKKERGNDAFKNGNYRKAYECYTEALNIDPSNKKTNAKLYGNRALVNIRLGRLREAISDCNEALKIDSSYIKALLR 326 (486)
T ss_pred HHHHHHHhhhhhHhhccchhHHHHHHHHhhcCCccccchhHHHHHHhHhhhcccCCchhhhhhhhhhhhcCHHHHHHHHH
Confidence 34557788999999999999999999999999997 245789999999999999999999999999999999999999
Q ss_pred HHHHHHhCCChHHHHHHHHHHHhchhh
Q 014478 394 QAACLFSLGMENDARETLKDGTNLEAK 420 (424)
Q Consensus 394 ~g~~~~~~~~~~~A~~~~~~al~l~~~ 420 (424)
+|.++..+++|++|+++|++|.+++-.
T Consensus 327 ra~c~l~le~~e~AV~d~~~a~q~~~s 353 (486)
T KOG0550|consen 327 RANCHLALEKWEEAVEDYEKAMQLEKD 353 (486)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhccc
Confidence 999999999999999999999988754
|
|
| >KOG4626 consensus O-linked N-acetylglucosamine transferase OGT [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.37 E-value=1.8e-12 Score=123.27 Aligned_cols=105 Identities=10% Similarity=0.028 Sum_probs=100.0
Q ss_pred hHHHHHHHHHHHhHHHhhCCHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhcCCCchHHHHHH
Q 014478 315 QMQETLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQ 394 (424)
Q Consensus 315 ~~~~~~~~~~~g~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~ 394 (424)
....++.+...|+.+...|.+++|...|.+|+...|+ .+++++|+|.+|.++|++++|+..|+.||.++|..++++.|+
T Consensus 350 ~p~hadam~NLgni~~E~~~~e~A~~ly~~al~v~p~-~aaa~nNLa~i~kqqgnl~~Ai~~YkealrI~P~fAda~~Nm 428 (966)
T KOG4626|consen 350 CPNHADAMNNLGNIYREQGKIEEATRLYLKALEVFPE-FAAAHNNLASIYKQQGNLDDAIMCYKEALRIKPTFADALSNM 428 (966)
T ss_pred CCccHHHHHHHHHHHHHhccchHHHHHHHHHHhhChh-hhhhhhhHHHHHHhcccHHHHHHHHHHHHhcCchHHHHHHhc
Confidence 3456778889999999999999999999999999999 999999999999999999999999999999999999999999
Q ss_pred HHHHHhCCChHHHHHHHHHHHhchhh
Q 014478 395 AACLFSLGMENDARETLKDGTNLEAK 420 (424)
Q Consensus 395 g~~~~~~~~~~~A~~~~~~al~l~~~ 420 (424)
|.+|..+|+.++|+.+|.+|+.++|.
T Consensus 429 Gnt~ke~g~v~~A~q~y~rAI~~nPt 454 (966)
T KOG4626|consen 429 GNTYKEMGDVSAAIQCYTRAIQINPT 454 (966)
T ss_pred chHHHHhhhHHHHHHHHHHHHhcCcH
Confidence 99999999999999999999999986
|
|
| >KOG0624 consensus dsRNA-activated protein kinase inhibitor P58, contains TPR and DnaJ domains [Defense mechanisms] | Back alignment and domain information |
|---|
Probab=99.36 E-value=3.2e-12 Score=113.64 Aligned_cols=108 Identities=19% Similarity=0.235 Sum_probs=102.4
Q ss_pred hHhHHHHHHHHHHHhHHHhhCCHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhcCCCchHHHH
Q 014478 313 TSQMQETLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALY 392 (424)
Q Consensus 313 ~~~~~~~~~~~~~g~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~ 392 (424)
.....++..-++.|+.++..|++.+|+..|..||+.+|+ ++.+++.+|.+|+.+|+-..|+.++.++|++.|++..|..
T Consensus 32 ~~~~advekhlElGk~lla~~Q~sDALt~yHaAve~dp~-~Y~aifrRaT~yLAmGksk~al~Dl~rVlelKpDF~~ARi 110 (504)
T KOG0624|consen 32 TASPADVEKHLELGKELLARGQLSDALTHYHAAVEGDPN-NYQAIFRRATVYLAMGKSKAALQDLSRVLELKPDFMAARI 110 (504)
T ss_pred cCCHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHcCCch-hHHHHHHHHHHHhhhcCCccchhhHHHHHhcCccHHHHHH
Confidence 344466778889999999999999999999999999999 9999999999999999999999999999999999999999
Q ss_pred HHHHHHHhCCChHHHHHHHHHHHhchhhc
Q 014478 393 LQAACLFSLGMENDARETLKDGTNLEAKK 421 (424)
Q Consensus 393 ~~g~~~~~~~~~~~A~~~~~~al~l~~~~ 421 (424)
.+|.+++++|++++|.++|+..|+-+|++
T Consensus 111 QRg~vllK~Gele~A~~DF~~vl~~~~s~ 139 (504)
T KOG0624|consen 111 QRGVVLLKQGELEQAEADFDQVLQHEPSN 139 (504)
T ss_pred HhchhhhhcccHHHHHHHHHHHHhcCCCc
Confidence 99999999999999999999999999964
|
|
| >TIGR00990 3a0801s09 mitochondrial precursor proteins import receptor (72 kDa mitochondrial outermembrane protein) (mitochondrial import receptor for the ADP/ATP carrier) (translocase of outermembrane tom70) | Back alignment and domain information |
|---|
Probab=99.36 E-value=7e-12 Score=128.36 Aligned_cols=101 Identities=26% Similarity=0.334 Sum_probs=94.7
Q ss_pred HHHHHHHHHHhHHHhhCCHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhcCCCchHHHHHHHH
Q 014478 317 QETLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAA 396 (424)
Q Consensus 317 ~~~~~~~~~g~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~ 396 (424)
..+..++.+|+.+++.|+|++|++.|+++|++.|+ ...|.|+|.||.++|++++|+.++++||+++|++.++|+++|.
T Consensus 125 ~~a~~~k~~G~~~~~~~~~~~Ai~~y~~al~~~p~--~~~~~n~a~~~~~l~~~~~Ai~~~~~al~l~p~~~~a~~~~a~ 202 (615)
T TIGR00990 125 KYAAKLKEKGNKAYRNKDFNKAIKLYSKAIECKPD--PVYYSNRAACHNALGDWEKVVEDTTAALELDPDYSKALNRRAN 202 (615)
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCc--hHHHHHHHHHHHHhCCHHHHHHHHHHHHHcCCCCHHHHHHHHH
Confidence 44678899999999999999999999999999996 5789999999999999999999999999999999999999999
Q ss_pred HHHhCCChHHHHHHHHHHHhchh
Q 014478 397 CLFSLGMENDARETLKDGTNLEA 419 (424)
Q Consensus 397 ~~~~~~~~~~A~~~~~~al~l~~ 419 (424)
+|..+|+|++|+.+|..++.+++
T Consensus 203 a~~~lg~~~eA~~~~~~~~~~~~ 225 (615)
T TIGR00990 203 AYDGLGKYADALLDLTASCIIDG 225 (615)
T ss_pred HHHHcCCHHHHHHHHHHHHHhCC
Confidence 99999999999999988876654
|
|
| >KOG1243 consensus Protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.36 E-value=7e-12 Score=121.60 Aligned_cols=145 Identities=14% Similarity=0.180 Sum_probs=115.0
Q ss_pred hhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHhHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCC
Q 014478 29 ETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGR 108 (424)
Q Consensus 29 ~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ 108 (424)
.+...+-++.|+.++||||+++++..+.....|||+|-+. .|..++.. +....+...+.||+.||.|||+.+.
T Consensus 53 ~~~~~~A~k~lKtlRHP~Il~yL~t~e~~~~~ylvTErV~--Pl~~~lk~-----l~~~~v~~Gl~qIl~AL~FL~~d~~ 125 (690)
T KOG1243|consen 53 TELAKRAVKRLKTLRHPNILSYLDTTEEEGTLYLVTERVR--PLETVLKE-----LGKEEVCLGLFQILAALSFLNDDCN 125 (690)
T ss_pred hHHHHHHHHHhhhccCchhhhhhhhhcccCceEEEeeccc--cHHHHHHH-----hHHHHHHHHHHHHHHHHHHHhccCC
Confidence 4567788899999999999999999999999999999984 78888854 3356667778999999999997655
Q ss_pred cccccCCCCCeeecCCCCeEEccccccccCCCCCc----cccCccCCCccccccCCCCCCcceehhHHHHHHHhhCCC
Q 014478 109 ALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKS----YSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKH 182 (424)
Q Consensus 109 ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~~~----~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~ 182 (424)
++|++|.-+.|+++..|..||++|.++........ ...-..|..|+.+.... -..|.|.|||+++|++.|..
T Consensus 126 lvHgNv~~~SVfVn~~GeWkLggle~v~~~~~~~~~~~~~~~~~s~~~P~~~~~s~--~s~D~~~Lg~li~el~ng~~ 201 (690)
T KOG1243|consen 126 LVHGNVCKDSVFVNESGEWKLGGLELVSKASGFNAPAKSLYLIESFDDPEEIDPSE--WSIDSWGLGCLIEELFNGSL 201 (690)
T ss_pred eeeccEeeeeEEEcCCCcEEEeeeEEEeccccCCcccccchhhhcccChhhcCccc--cchhhhhHHHHHHHHhCccc
Confidence 99999999999999999999999998765443321 11123455666544222 34699999999999999953
|
|
| >cd05151 ChoK Choline Kinase (ChoK) | Back alignment and domain information |
|---|
Probab=99.34 E-value=3e-12 Score=108.68 Aligned_cols=123 Identities=15% Similarity=0.035 Sum_probs=90.9
Q ss_pred CCCcccceeeeecceecccccCCCchhhhHHHHHHHHHhcCCCcC-cceeEEEEEeCCeeeEEEecCCCCCHHhHhccCC
Q 014478 2 GGRCSKFSICWFHCHLKSSVLESSDLGETLNLEEAKAVGNLRSER-LANLIGCCYEADERLLVAEFMPNETLAKHLFHWE 80 (424)
Q Consensus 2 G~~g~v~~~~~~~~~v~~~~~~~~~~~~~~~~~E~~~l~~l~h~~-iv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~ 80 (424)
|.++.||.....+..+.+|+..........+..|+.+++.+.+.+ +++++.+.. ...++||||++|.++...-
T Consensus 9 G~~~~vy~~~~~~~~~~lK~~~~~~~~~~~~~~E~~~l~~l~~~~~~P~~~~~~~--~~~~lv~e~i~G~~l~~~~---- 82 (170)
T cd05151 9 GMTNKNYRVEVANKKYVVRIPGNGTELLINRENEAENSKLAAEAGIGPKLYYFDP--ETGVLITEFIEGSELLTED---- 82 (170)
T ss_pred cccCceEEEEECCeEEEEEeCCCCcccccCHHHHHHHHHHHHHhCCCCceEEEeC--CCCeEEEEecCCCcccccc----
Confidence 556788888777777777776544333345678999999986544 456666543 3358999999998876431
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHhCCC----cccccCCCCCeeecCCCCeEEcccccccc
Q 014478 81 TQPMKWAMRLRVALYLAQALEYCSSKGR----ALYHDLNAYRILFDKDGNPRLSSFGLMKN 137 (424)
Q Consensus 81 ~~~l~~~~~~~i~~qi~~~L~~lH~~~~----ivH~dikp~Nill~~~~~~kl~Dfg~~~~ 137 (424)
. ....++.+++.+|..||..+. ++|+|++|.||+++ ++.++++|||.+..
T Consensus 83 ---~---~~~~~~~~l~~~l~~LH~~~~~~~~~~HgD~~~~Nil~~-~~~~~liDf~~a~~ 136 (170)
T cd05151 83 ---F---SDPENLEKIAKLLKKLHSSPLPDLVPCHNDLLPGNFLLD-DGRLWLIDWEYAGM 136 (170)
T ss_pred ---c---cCHHHHHHHHHHHHHHhCCCCCCceeecCCCCcCcEEEE-CCeEEEEecccccC
Confidence 1 113457899999999999871 39999999999999 66899999997654
|
The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph |
| >KOG0551 consensus Hsp90 co-chaperone CNS1 (contains TPR repeats) [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=99.34 E-value=4.1e-12 Score=112.55 Aligned_cols=104 Identities=22% Similarity=0.340 Sum_probs=96.8
Q ss_pred HHHHHHHHHhHHHhhCCHHHHHHHHHHHhcC---CCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhcCCCchHHHHHH
Q 014478 318 ETLNSKKHGDTAFRAKDFSTAIDCYTQFIDG---GTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQ 394 (424)
Q Consensus 318 ~~~~~~~~g~~~~~~g~~~~A~~~~~~ai~~---~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~ 394 (424)
.|..+++.||.+|+.++|..|++.|+++|+. ||+.++..|+|||+|.+-+|+|..|++++.+|+.++|++.+|+++-
T Consensus 80 ~Aen~KeeGN~~fK~Kryk~A~~~Yt~Glk~kc~D~dlnavLY~NRAAa~~~l~NyRs~l~Dcs~al~~~P~h~Ka~~R~ 159 (390)
T KOG0551|consen 80 QAENYKEEGNEYFKEKRYKDAVESYTEGLKKKCADPDLNAVLYTNRAAAQLYLGNYRSALNDCSAALKLKPTHLKAYIRG 159 (390)
T ss_pred HHHHHHHHhHHHHHhhhHHHHHHHHHHHHhhcCCCccHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcCcchhhhhhhh
Confidence 5789999999999999999999999999986 5556789999999999999999999999999999999999999999
Q ss_pred HHHHHhCCChHHHHHHHHHHHhchhhc
Q 014478 395 AACLFSLGMENDARETLKDGTNLEAKK 421 (424)
Q Consensus 395 g~~~~~~~~~~~A~~~~~~al~l~~~~ 421 (424)
|.++++++++++|+.-++..+.++.++
T Consensus 160 Akc~~eLe~~~~a~nw~ee~~~~d~e~ 186 (390)
T KOG0551|consen 160 AKCLLELERFAEAVNWCEEGLQIDDEA 186 (390)
T ss_pred hHHHHHHHHHHHHHHHHhhhhhhhHHH
Confidence 999999999999999999888877653
|
|
| >KOG0545 consensus Aryl-hydrocarbon receptor-interacting protein [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=99.34 E-value=6.6e-12 Score=106.66 Aligned_cols=105 Identities=16% Similarity=0.169 Sum_probs=95.1
Q ss_pred HHHHHHHHHHHhHHHhhCCHHHHHHHHHHHhc--------CCCCC---------CHHHHHHHHHHHHhcCChHHHHHHHH
Q 014478 316 MQETLNSKKHGDTAFRAKDFSTAIDCYTQFID--------GGTMV---------SPTVYARRCLSYLMNDMPQEALGDAM 378 (424)
Q Consensus 316 ~~~~~~~~~~g~~~~~~g~~~~A~~~~~~ai~--------~~p~~---------~~~~~~~~~~~~~~~~~~~~A~~~~~ 378 (424)
+.....+.++||.+|+.|+|.+|...|..||. ..|.+ ...++.|.+.|++..|+|-++++.+.
T Consensus 175 mkav~~l~q~GN~lfk~~~ykEA~~~YreAi~~l~~L~lkEkP~e~eW~eLdk~~tpLllNy~QC~L~~~e~yevleh~s 254 (329)
T KOG0545|consen 175 MKAVPVLHQEGNRLFKLGRYKEASSKYREAIICLRNLQLKEKPGEPEWLELDKMITPLLLNYCQCLLKKEEYYEVLEHCS 254 (329)
T ss_pred hhhhHHHHHhhhhhhhhccHHHHHHHHHHHHHHHHHHHhccCCCChHHHHHHHhhhHHHHhHHHHHhhHHHHHHHHHHHH
Confidence 34455788999999999999999999999983 23431 34789999999999999999999999
Q ss_pred HHHhcCCCchHHHHHHHHHHHhCCChHHHHHHHHHHHhchhh
Q 014478 379 QAQVVSPDWPTALYLQAACLFSLGMENDARETLKDGTNLEAK 420 (424)
Q Consensus 379 ~al~~~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~ 420 (424)
..|..+|+|.+|||++|.++...-+.++|.++|.++|+++|.
T Consensus 255 eiL~~~~~nvKA~frRakAhaa~Wn~~eA~~D~~~vL~ldps 296 (329)
T KOG0545|consen 255 EILRHHPGNVKAYFRRAKAHAAVWNEAEAKADLQKVLELDPS 296 (329)
T ss_pred HHHhcCCchHHHHHHHHHHHHhhcCHHHHHHHHHHHHhcChh
Confidence 999999999999999999999999999999999999999996
|
|
| >COG3063 PilF Tfp pilus assembly protein PilF [Cell motility and secretion / Intracellular trafficking and secretion] | Back alignment and domain information |
|---|
Probab=99.33 E-value=1.8e-11 Score=103.53 Aligned_cols=97 Identities=12% Similarity=0.029 Sum_probs=80.6
Q ss_pred HHHHHHHHhHHHhhCCHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhcCCCchHHHHHHHHHH
Q 014478 319 TLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAACL 398 (424)
Q Consensus 319 ~~~~~~~g~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~ 398 (424)
+...++.|..|++.|++..|.+.+++||+.||+ +..+|.-+|.+|.+.|+.+.|-+.|++|+.++|++.+.+.|.|..+
T Consensus 35 a~arlqLal~YL~~gd~~~A~~nlekAL~~DPs-~~~a~~~~A~~Yq~~Ge~~~A~e~YrkAlsl~p~~GdVLNNYG~FL 113 (250)
T COG3063 35 AKARLQLALGYLQQGDYAQAKKNLEKALEHDPS-YYLAHLVRAHYYQKLGENDLADESYRKALSLAPNNGDVLNNYGAFL 113 (250)
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCcc-cHHHHHHHHHHHHHcCChhhHHHHHHHHHhcCCCccchhhhhhHHH
Confidence 445667788888888888888888888888888 8888888888888888888888888888888888888888888888
Q ss_pred HhCCChHHHHHHHHHHHh
Q 014478 399 FSLGMENDARETLKDGTN 416 (424)
Q Consensus 399 ~~~~~~~~A~~~~~~al~ 416 (424)
+.+|+|++|...|++|+.
T Consensus 114 C~qg~~~eA~q~F~~Al~ 131 (250)
T COG3063 114 CAQGRPEEAMQQFERALA 131 (250)
T ss_pred HhCCChHHHHHHHHHHHh
Confidence 888888888888888775
|
|
| >KOG1126 consensus DNA-binding cell division cycle control protein [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.33 E-value=1.3e-12 Score=125.58 Aligned_cols=105 Identities=15% Similarity=0.109 Sum_probs=97.5
Q ss_pred HHHHHHHHHHhHHHhhCCHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhcCCCchHHHHHHHH
Q 014478 317 QETLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAA 396 (424)
Q Consensus 317 ~~~~~~~~~g~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~ 396 (424)
.....|-..||.+--+++|+.|+++|.+||++||+ +.-+|..+|.-+....++|.|...|++||.++|++..|||.+|.
T Consensus 419 ~sPesWca~GNcfSLQkdh~~Aik~f~RAiQldp~-faYayTLlGhE~~~~ee~d~a~~~fr~Al~~~~rhYnAwYGlG~ 497 (638)
T KOG1126|consen 419 NSPESWCALGNCFSLQKDHDTAIKCFKRAIQLDPR-FAYAYTLLGHESIATEEFDKAMKSFRKALGVDPRHYNAWYGLGT 497 (638)
T ss_pred CCcHHHHHhcchhhhhhHHHHHHHHHHHhhccCCc-cchhhhhcCChhhhhHHHHhHHHHHHhhhcCCchhhHHHHhhhh
Confidence 34457778899999999999999999999999999 99999999999999999999999999999999999999999999
Q ss_pred HHHhCCChHHHHHHHHHHHhchhhcC
Q 014478 397 CLFSLGMENDARETLKDGTNLEAKKN 422 (424)
Q Consensus 397 ~~~~~~~~~~A~~~~~~al~l~~~~~ 422 (424)
+|+++++++.|.-+|++|+++||.+.
T Consensus 498 vy~Kqek~e~Ae~~fqkA~~INP~ns 523 (638)
T KOG1126|consen 498 VYLKQEKLEFAEFHFQKAVEINPSNS 523 (638)
T ss_pred heeccchhhHHHHHHHhhhcCCccch
Confidence 99999999999999999999999753
|
|
| >TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase | Back alignment and domain information |
|---|
Probab=99.31 E-value=5.9e-12 Score=122.33 Aligned_cols=133 Identities=19% Similarity=0.128 Sum_probs=92.6
Q ss_pred CCCcccceeee-ecceecccccCCCchh-----------------------------------------hhHHHHHHHHH
Q 014478 2 GGRCSKFSICW-FHCHLKSSVLESSDLG-----------------------------------------ETLNLEEAKAV 39 (424)
Q Consensus 2 G~~g~v~~~~~-~~~~v~~~~~~~~~~~-----------------------------------------~~~~~~E~~~l 39 (424)
||+|.||++.. .+..|++|+..+.-.. .-+|.+|++.+
T Consensus 128 aSigQVh~A~l~~G~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eldf~~Ea~n~ 207 (437)
T TIGR01982 128 ASIAQVHRARLVDGKEVAVKVLRPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLRRELDLRREAANA 207 (437)
T ss_pred eehhheEEEEecCCCEEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHHHHHHCHHHHHHHH
Confidence 78899999987 6788999887543210 01355566666
Q ss_pred hcCC----CcCcceeEEEEEe-CCeeeEEEecCCCCCHHhHhccCCCCCCCHHHHHHHHHHHHH-HHHHHHhCCCccccc
Q 014478 40 GNLR----SERLANLIGCCYE-ADERLLVAEFMPNETLAKHLFHWETQPMKWAMRLRVALYLAQ-ALEYCSSKGRALYHD 113 (424)
Q Consensus 40 ~~l~----h~~iv~~~~~~~~-~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~-~L~~lH~~~~ivH~d 113 (424)
.++. |.+-+.+-.++.+ ....+|||||++|++|.++.... ....+ ..+++.+++. .+..+|..| ++|+|
T Consensus 208 ~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~~~~~~~-~~~~~---~~~ia~~~~~~~l~ql~~~g-~~H~D 282 (437)
T TIGR01982 208 SELGENFKNDPGVYVPEVYWDRTSERVLTMEWIDGIPLSDIAALD-EAGLD---RKALAENLARSFLNQVLRDG-FFHAD 282 (437)
T ss_pred HHHHHhcCCCCCEEeCCEehhhcCCceEEEEeECCcccccHHHHH-hcCCC---HHHHHHHHHHHHHHHHHhCC-ceeCC
Confidence 6662 3333333333322 33468999999999999876421 11222 3456666665 468889999 99999
Q ss_pred CCCCCeeecCCCCeEEccccccccCC
Q 014478 114 LNAYRILFDKDGNPRLSSFGLMKNSR 139 (424)
Q Consensus 114 ikp~Nill~~~~~~kl~Dfg~~~~~~ 139 (424)
+||.||+++.++.++++|||++....
T Consensus 283 ~hPgNilv~~~g~i~liDfG~~~~l~ 308 (437)
T TIGR01982 283 LHPGNIFVLKDGKIIALDFGIVGRLS 308 (437)
T ss_pred CCcccEEECCCCcEEEEeCCCeeECC
Confidence 99999999999999999999987654
|
This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species. |
| >KOG4555 consensus TPR repeat-containing protein [Function unknown] | Back alignment and domain information |
|---|
Probab=99.31 E-value=4.9e-11 Score=91.48 Aligned_cols=105 Identities=17% Similarity=0.187 Sum_probs=94.4
Q ss_pred HhHHHHHHHHHHHhHHHhhCCHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhcCCCc----hH
Q 014478 314 SQMQETLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDW----PT 389 (424)
Q Consensus 314 ~~~~~~~~~~~~g~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~----~~ 389 (424)
+..+.+..+-.+|..+...|+.++|++.|.++|.+.|. ++.+|+|++.+|..+|+.++|+.++++|+++.-+. -.
T Consensus 38 ~~~e~S~~LEl~~valaE~g~Ld~AlE~F~qal~l~P~-raSayNNRAQa~RLq~~~e~ALdDLn~AleLag~~trtacq 116 (175)
T KOG4555|consen 38 QAIKASRELELKAIALAEAGDLDGALELFGQALCLAPE-RASAYNNRAQALRLQGDDEEALDDLNKALELAGDQTRTACQ 116 (175)
T ss_pred HHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHhccc-chHhhccHHHHHHHcCChHHHHHHHHHHHHhcCccchHHHH
Confidence 34455667778999999999999999999999999999 99999999999999999999999999999996543 35
Q ss_pred HHHHHHHHHHhCCChHHHHHHHHHHHhchh
Q 014478 390 ALYLQAACLFSLGMENDARETLKDGTNLEA 419 (424)
Q Consensus 390 a~~~~g~~~~~~~~~~~A~~~~~~al~l~~ 419 (424)
+|..+|.+|+.+|+-+.|..+|..|-++-.
T Consensus 117 a~vQRg~lyRl~g~dd~AR~DFe~AA~LGS 146 (175)
T KOG4555|consen 117 AFVQRGLLYRLLGNDDAARADFEAAAQLGS 146 (175)
T ss_pred HHHHHHHHHHHhCchHHHHHhHHHHHHhCC
Confidence 899999999999999999999999887653
|
|
| >TIGR02795 tol_pal_ybgF tol-pal system protein YbgF | Back alignment and domain information |
|---|
Probab=99.30 E-value=3.7e-11 Score=95.33 Aligned_cols=101 Identities=19% Similarity=0.171 Sum_probs=93.8
Q ss_pred HHHHHHHhHHHhhCCHHHHHHHHHHHhcCCCCCC---HHHHHHHHHHHHhcCChHHHHHHHHHHHhcCCCc---hHHHHH
Q 014478 320 LNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVS---PTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDW---PTALYL 393 (424)
Q Consensus 320 ~~~~~~g~~~~~~g~~~~A~~~~~~ai~~~p~~~---~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~---~~a~~~ 393 (424)
..+...|..+++.|++++|++.|.+++...|+ + ..+++.+|.++.+.|++++|+..+++++..+|++ +.+++.
T Consensus 3 ~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~~~~ 81 (119)
T TIGR02795 3 EAYYDAALLVLKAGDYADAIQAFQAFLKKYPK-STYAPNAHYWLGEAYYAQGKYADAAKAFLAVVKKYPKSPKAPDALLK 81 (119)
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHCCC-ccccHHHHHHHHHHHHhhccHHHHHHHHHHHHHHCCCCCcccHHHHH
Confidence 45678899999999999999999999999987 4 5789999999999999999999999999999986 678999
Q ss_pred HHHHHHhCCChHHHHHHHHHHHhchhhc
Q 014478 394 QAACLFSLGMENDARETLKDGTNLEAKK 421 (424)
Q Consensus 394 ~g~~~~~~~~~~~A~~~~~~al~l~~~~ 421 (424)
+|.++..+|++++|+..|+++++..|++
T Consensus 82 ~~~~~~~~~~~~~A~~~~~~~~~~~p~~ 109 (119)
T TIGR02795 82 LGMSLQELGDKEKAKATLQQVIKRYPGS 109 (119)
T ss_pred HHHHHHHhCChHHHHHHHHHHHHHCcCC
Confidence 9999999999999999999999999875
|
Members of this protein family are the product of one of seven genes regularly clustered in operons to encode the proteins of the tol-pal system, which is critical for maintaining the integrity of the bacterial outer membrane. The gene for this periplasmic protein has been designated orf2 and ybgF. All members of the seed alignment were from unique tol-pal gene regions from completed bacterial genomes. The architecture of this protein is a signal sequence, a low-complexity region usually rich in Asn and Gln, a well-conserved region with tandem repeats that resemble the tetratricopeptide (TPR) repeat, involved in protein-protein interaction. |
| >PF12895 Apc3: Anaphase-promoting complex, cyclosome, subunit 3; PDB: 3KAE_D 3Q4A_B 2C2L_D 3Q47_B 3Q49_B 2XPI_A 3ULQ_A | Back alignment and domain information |
|---|
Probab=99.29 E-value=6e-12 Score=93.29 Aligned_cols=82 Identities=21% Similarity=0.346 Sum_probs=74.7
Q ss_pred hCCHHHHHHHHHHHhcCCCCC-CHHHHHHHHHHHHhcCChHHHHHHHHHHHhcCCCchHHHHHHHHHHHhCCChHHHHHH
Q 014478 332 AKDFSTAIDCYTQFIDGGTMV-SPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAACLFSLGMENDARET 410 (424)
Q Consensus 332 ~g~~~~A~~~~~~ai~~~p~~-~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~~~~~~~A~~~ 410 (424)
+|+|++|+..|+++++.+|.+ +..+++++|.||+++|+|++|+..+++ ++.+|.+...++.+|.++.++|+|++|++.
T Consensus 2 ~~~y~~Ai~~~~k~~~~~~~~~~~~~~~~la~~~~~~~~y~~A~~~~~~-~~~~~~~~~~~~l~a~~~~~l~~y~eAi~~ 80 (84)
T PF12895_consen 2 QGNYENAIKYYEKLLELDPTNPNSAYLYNLAQCYFQQGKYEEAIELLQK-LKLDPSNPDIHYLLARCLLKLGKYEEAIKA 80 (84)
T ss_dssp TT-HHHHHHHHHHHHHHHCGTHHHHHHHHHHHHHHHTTHHHHHHHHHHC-HTHHHCHHHHHHHHHHHHHHTT-HHHHHHH
T ss_pred CccHHHHHHHHHHHHHHCCCChhHHHHHHHHHHHHHCCCHHHHHHHHHH-hCCCCCCHHHHHHHHHHHHHhCCHHHHHHH
Confidence 689999999999999999962 467788899999999999999999999 999999999999999999999999999999
Q ss_pred HHHH
Q 014478 411 LKDG 414 (424)
Q Consensus 411 ~~~a 414 (424)
|++|
T Consensus 81 l~~~ 84 (84)
T PF12895_consen 81 LEKA 84 (84)
T ss_dssp HHHH
T ss_pred HhcC
Confidence 9876
|
|
| >KOG0376 consensus Serine-threonine phosphatase 2A, catalytic subunit [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.27 E-value=2.6e-12 Score=119.70 Aligned_cols=104 Identities=23% Similarity=0.294 Sum_probs=100.0
Q ss_pred HHHHHHHHHhHHHhhCCHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhcCCCchHHHHHHHHH
Q 014478 318 ETLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAAC 397 (424)
Q Consensus 318 ~~~~~~~~g~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~ 397 (424)
.+..++.+|+.++..++|+.|+..|.+||+++|+ .+.++.+|+.++++.++|..|+.++.+||+++|+..++|+++|.+
T Consensus 3 ~a~e~k~ean~~l~~~~fd~avdlysKaI~ldpn-ca~~~anRa~a~lK~e~~~~Al~Da~kaie~dP~~~K~Y~rrg~a 81 (476)
T KOG0376|consen 3 SAEELKNEANEALKDKVFDVAVDLYSKAIELDPN-CAIYFANRALAHLKVESFGGALHDALKAIELDPTYIKAYVRRGTA 81 (476)
T ss_pred hhhhhhhHHhhhcccchHHHHHHHHHHHHhcCCc-ceeeechhhhhheeechhhhHHHHHHhhhhcCchhhheeeeccHH
Confidence 4667889999999999999999999999999999 999999999999999999999999999999999999999999999
Q ss_pred HHhCCChHHHHHHHHHHHhchhhcC
Q 014478 398 LFSLGMENDARETLKDGTNLEAKKN 422 (424)
Q Consensus 398 ~~~~~~~~~A~~~~~~al~l~~~~~ 422 (424)
.+.++++.+|+.+|+.+..+.|++.
T Consensus 82 ~m~l~~~~~A~~~l~~~~~l~Pnd~ 106 (476)
T KOG0376|consen 82 VMALGEFKKALLDLEKVKKLAPNDP 106 (476)
T ss_pred HHhHHHHHHHHHHHHHhhhcCcCcH
Confidence 9999999999999999999999753
|
|
| >cd00189 TPR Tetratricopeptide repeat domain; typically contains 34 amino acids [WLF]-X(2)-[LIM]-[GAS]-X(2)-[YLF]-X(8)-[ASE]-X(3)-[FYL]-X(2)-[ASL]-X(4)-[PKE] is the consensus sequence; found in a variety of organisms including bacteria, cyanobacteria, yeast, fungi, plants, and humans in various subcellular locations; involved in a variety of functions including protein-protein interactions, but common features in the interaction partners have not been defined; involved in chaperone, cell-cycle, transciption, and protein transport complexes; the number of TPR motifs varies among proteins (1,3-11,13 15,16,19); 5-6 tandem repeats generate a right-handed helical structure with an amphipathic channel that is thought to accomodate an alpha-helix of a target protein; it has been proposed that TPR proteins preferably interact with WD-40 repeat proteins, but in many instances several TPR-proteins seem to aggregate to multi-protein complexes; examples of TPR-proteins include, Cdc16p, Cdc23p and C | Back alignment and domain information |
|---|
Probab=99.27 E-value=5.1e-11 Score=89.60 Aligned_cols=98 Identities=20% Similarity=0.310 Sum_probs=93.2
Q ss_pred HHHHHhHHHhhCCHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhcCCCchHHHHHHHHHHHhC
Q 014478 322 SKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAACLFSL 401 (424)
Q Consensus 322 ~~~~g~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~~ 401 (424)
+...|..++..|++++|+..+.++++..|. +..++..+|.++...+++++|+..+++++...|.+..+++.+|.++..+
T Consensus 3 ~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (100)
T cd00189 3 LLNLGNLYYKLGDYDEALEYYEKALELDPD-NADAYYNLAAAYYKLGKYEEALEDYEKALELDPDNAKAYYNLGLAYYKL 81 (100)
T ss_pred HHHHHHHHHHHhcHHHHHHHHHHHHhcCCc-cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcchhHHHHHHHHHHHH
Confidence 557888899999999999999999999999 8899999999999999999999999999999999999999999999999
Q ss_pred CChHHHHHHHHHHHhchhh
Q 014478 402 GMENDARETLKDGTNLEAK 420 (424)
Q Consensus 402 ~~~~~A~~~~~~al~l~~~ 420 (424)
|++++|...++++++.+|+
T Consensus 82 ~~~~~a~~~~~~~~~~~~~ 100 (100)
T cd00189 82 GKYEEALEAYEKALELDPN 100 (100)
T ss_pred HhHHHHHHHHHHHHccCCC
Confidence 9999999999999998873
|
|
| >PF13414 TPR_11: TPR repeat; PDB: 2HO1_B 2FI7_B 2DBA_A 3Q4A_B 2C2L_D 3Q47_B 3Q49_B 2PL2_B 3IEG_B 2FBN_A | Back alignment and domain information |
|---|
Probab=99.26 E-value=1e-11 Score=88.28 Aligned_cols=67 Identities=21% Similarity=0.278 Sum_probs=64.2
Q ss_pred HHHHHHHHHhHHHhhCCHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHhcC-ChHHHHHHHHHHHhcCC
Q 014478 318 ETLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMND-MPQEALGDAMQAQVVSP 385 (424)
Q Consensus 318 ~~~~~~~~g~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~-~~~~A~~~~~~al~~~p 385 (424)
.+..+...|..++..|+|++|+..|+++|+.+|+ +..+++++|.+|..+| ++++|+.++++|++++|
T Consensus 2 ~a~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~-~~~~~~~~g~~~~~~~~~~~~A~~~~~~al~l~P 69 (69)
T PF13414_consen 2 NAEAWYNLGQIYFQQGDYEEAIEYFEKAIELDPN-NAEAYYNLGLAYMKLGKDYEEAIEDFEKALKLDP 69 (69)
T ss_dssp SHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHSTT-HHHHHHHHHHHHHHTTTHHHHHHHHHHHHHHHST
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCC-CHHHHHHHHHHHHHhCccHHHHHHHHHHHHHcCc
Confidence 3667889999999999999999999999999999 9999999999999999 79999999999999998
|
... |
| >PRK02603 photosystem I assembly protein Ycf3; Provisional | Back alignment and domain information |
|---|
Probab=99.25 E-value=9.2e-11 Score=99.69 Aligned_cols=107 Identities=20% Similarity=0.196 Sum_probs=96.3
Q ss_pred hHHHHHHHHHHHhHHHhhCCHHHHHHHHHHHhcCCCCC--CHHHHHHHHHHHHhcCChHHHHHHHHHHHhcCCCchHHHH
Q 014478 315 QMQETLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMV--SPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALY 392 (424)
Q Consensus 315 ~~~~~~~~~~~g~~~~~~g~~~~A~~~~~~ai~~~p~~--~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~ 392 (424)
....+..+...|..+...|++++|+..|.++++..|+. ...++.++|.++..+|++++|+..+++++.++|++..++.
T Consensus 31 ~~~~a~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~ 110 (172)
T PRK02603 31 KAKEAFVYYRDGMSAQADGEYAEALENYEEALKLEEDPNDRSYILYNMGIIYASNGEHDKALEYYHQALELNPKQPSALN 110 (172)
T ss_pred HhhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcccHHHHH
Confidence 34556678899999999999999999999999887652 2478999999999999999999999999999999999999
Q ss_pred HHHHHHHhCCC--------------hHHHHHHHHHHHhchhhc
Q 014478 393 LQAACLFSLGM--------------ENDARETLKDGTNLEAKK 421 (424)
Q Consensus 393 ~~g~~~~~~~~--------------~~~A~~~~~~al~l~~~~ 421 (424)
.+|.++..+|+ +++|+++++++++++|.+
T Consensus 111 ~lg~~~~~~g~~~~a~~~~~~A~~~~~~A~~~~~~a~~~~p~~ 153 (172)
T PRK02603 111 NIAVIYHKRGEKAEEAGDQDEAEALFDKAAEYWKQAIRLAPNN 153 (172)
T ss_pred HHHHHHHHcCChHhHhhCHHHHHHHHHHHHHHHHHHHhhCchh
Confidence 99999999998 788999999999998874
|
|
| >TIGR00990 3a0801s09 mitochondrial precursor proteins import receptor (72 kDa mitochondrial outermembrane protein) (mitochondrial import receptor for the ADP/ATP carrier) (translocase of outermembrane tom70) | Back alignment and domain information |
|---|
Probab=99.25 E-value=6.7e-11 Score=121.20 Aligned_cols=99 Identities=17% Similarity=0.144 Sum_probs=53.2
Q ss_pred HHHHHHhHHHhhCCHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhcCCCchHHHHHHHHHHHh
Q 014478 321 NSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAACLFS 400 (424)
Q Consensus 321 ~~~~~g~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~ 400 (424)
.+...|..++..|++++|+..|+++++++|+ ....|.++|.++..+|++++|+..++++++++|+++.+|+++|.+++.
T Consensus 333 a~~~lg~~~~~~g~~~eA~~~~~kal~l~P~-~~~~~~~la~~~~~~g~~~eA~~~~~~al~~~p~~~~~~~~lg~~~~~ 411 (615)
T TIGR00990 333 ALNLRGTFKCLKGKHLEALADLSKSIELDPR-VTQSYIKRASMNLELGDPDKAEEDFDKALKLNSEDPDIYYHRAQLHFI 411 (615)
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHcCCC-cHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Confidence 3444455555555555555555555555555 555555555555555555555555555555555555555555555555
Q ss_pred CCChHHHHHHHHHHHhchhh
Q 014478 401 LGMENDARETLKDGTNLEAK 420 (424)
Q Consensus 401 ~~~~~~A~~~~~~al~l~~~ 420 (424)
+|++++|+.+|+++++++|+
T Consensus 412 ~g~~~~A~~~~~kal~l~P~ 431 (615)
T TIGR00990 412 KGEFAQAGKDYQKSIDLDPD 431 (615)
T ss_pred cCCHHHHHHHHHHHHHcCcc
Confidence 55555555555555555553
|
|
| >COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.24 E-value=5.3e-11 Score=98.25 Aligned_cols=125 Identities=17% Similarity=0.193 Sum_probs=90.2
Q ss_pred CCCcccceeeeecceeccccc-CC----Cc----hhhhHHHHHHHHHhcCCCc--CcceeEEEEEeCCeeeEEEecCCCC
Q 014478 2 GGRCSKFSICWFHCHLKSSVL-ES----SD----LGETLNLEEAKAVGNLRSE--RLANLIGCCYEADERLLVAEFMPNE 70 (424)
Q Consensus 2 G~~g~v~~~~~~~~~v~~~~~-~~----~~----~~~~~~~~E~~~l~~l~h~--~iv~~~~~~~~~~~~~lv~e~~~~g 70 (424)
|+-..++.+.|.+..+.+|.- .+ .. ....+..+|++++.++.-- +.+.++++ +.....|+|||++|.
T Consensus 7 GAEa~i~~~~~~g~~av~K~Ri~K~YR~p~LD~klrr~Rt~~Earil~~a~~~GV~~P~v~dv--D~~~~~I~me~I~G~ 84 (204)
T COG3642 7 GAEAIIYLTDFLGLPAVVKERIPKRYRHPELDEKLRRERTRREARILAKAREAGVPVPIVYDV--DPDNGLIVMEYIEGE 84 (204)
T ss_pred CcceeEEeeeccCcceEEEeecCcccCChHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEE--cCCCCEEEEEEeCCh
Confidence 666778888887755333322 11 11 1245677899999999543 44455554 445568999999999
Q ss_pred CHHhHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCC
Q 014478 71 TLAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSR 139 (424)
Q Consensus 71 sL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~ 139 (424)
.|.+.+... ...++..+-.-+.-||..| |+|+||.++||+++.++ +.++|||++....
T Consensus 85 ~lkd~l~~~---------~~~~~r~vG~~vg~lH~~g-ivHGDLTtsNiIl~~~~-i~~IDfGLg~~s~ 142 (204)
T COG3642 85 LLKDALEEA---------RPDLLREVGRLVGKLHKAG-IVHGDLTTSNIILSGGR-IYFIDFGLGEFSD 142 (204)
T ss_pred hHHHHHHhc---------chHHHHHHHHHHHHHHhcC-eecCCCccceEEEeCCc-EEEEECCcccccc
Confidence 999888542 2456677777778899999 99999999999998665 8999999987543
|
|
| >PRK09782 bacteriophage N4 receptor, outer membrane subunit; Provisional | Back alignment and domain information |
|---|
Probab=99.22 E-value=9.7e-11 Score=123.42 Aligned_cols=103 Identities=8% Similarity=-0.099 Sum_probs=97.6
Q ss_pred HHHHHHHHhHHHhhCCHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhcCCCchHHHHHHHHHH
Q 014478 319 TLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAACL 398 (424)
Q Consensus 319 ~~~~~~~g~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~ 398 (424)
...+...|..+.+.|++++|++.|+++++++|+ +..+++++|.++..+|++++|+..|++|++++|+++.+++++|.++
T Consensus 609 ~~a~~~LA~~l~~lG~~deA~~~l~~AL~l~Pd-~~~a~~nLG~aL~~~G~~eeAi~~l~~AL~l~P~~~~a~~nLA~al 687 (987)
T PRK09782 609 ANAYVARATIYRQRHNVPAAVSDLRAALELEPN-NSNYQAALGYALWDSGDIAQSREMLERAHKGLPDDPALIRQLAYVN 687 (987)
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Confidence 445667889999999999999999999999999 9999999999999999999999999999999999999999999999
Q ss_pred HhCCChHHHHHHHHHHHhchhhcC
Q 014478 399 FSLGMENDARETLKDGTNLEAKKN 422 (424)
Q Consensus 399 ~~~~~~~~A~~~~~~al~l~~~~~ 422 (424)
..+|++++|+.+|++|++++|...
T Consensus 688 ~~lGd~~eA~~~l~~Al~l~P~~a 711 (987)
T PRK09782 688 QRLDDMAATQHYARLVIDDIDNQA 711 (987)
T ss_pred HHCCCHHHHHHHHHHHHhcCCCCc
Confidence 999999999999999999999753
|
|
| >CHL00033 ycf3 photosystem I assembly protein Ycf3 | Back alignment and domain information |
|---|
Probab=99.22 E-value=2.2e-10 Score=96.96 Aligned_cols=106 Identities=20% Similarity=0.127 Sum_probs=91.6
Q ss_pred hHHHHHHHHHHHhHHHhhCCHHHHHHHHHHHhcCCCCC--CHHHHHHHHHHHHhcCChHHHHHHHHHHHhcCCCchHHHH
Q 014478 315 QMQETLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMV--SPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALY 392 (424)
Q Consensus 315 ~~~~~~~~~~~g~~~~~~g~~~~A~~~~~~ai~~~p~~--~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~ 392 (424)
....+..+...|..+...|++++|+..|.+++.+.|+. ...++.++|.+|...|++++|+..+++|+.++|.+..++.
T Consensus 31 ~~~~a~~~~~~g~~~~~~g~~~~A~~~~~~al~l~~~~~~~~~~~~~lg~~~~~~g~~~eA~~~~~~Al~~~~~~~~~~~ 110 (168)
T CHL00033 31 GEKEAFTYYRDGMSAQSEGEYAEALQNYYEAMRLEIDPYDRSYILYNIGLIHTSNGEHTKALEYYFQALERNPFLPQALN 110 (168)
T ss_pred hhHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhccccchhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcCcHHHHH
Confidence 44467788899999999999999999999999887651 3458999999999999999999999999999999999999
Q ss_pred HHHHHHH-------hCCChH-------HHHHHHHHHHhchhh
Q 014478 393 LQAACLF-------SLGMEN-------DARETLKDGTNLEAK 420 (424)
Q Consensus 393 ~~g~~~~-------~~~~~~-------~A~~~~~~al~l~~~ 420 (424)
++|.++. .+|+++ +|+..|++++..+|.
T Consensus 111 ~la~i~~~~~~~~~~~g~~~~A~~~~~~a~~~~~~a~~~~p~ 152 (168)
T CHL00033 111 NMAVICHYRGEQAIEQGDSEIAEAWFDQAAEYWKQAIALAPG 152 (168)
T ss_pred HHHHHHHHhhHHHHHcccHHHHHHHHHHHHHHHHHHHHhCcc
Confidence 9999999 777877 556666677777774
|
|
| >PRK15179 Vi polysaccharide biosynthesis protein TviE; Provisional | Back alignment and domain information |
|---|
Probab=99.20 E-value=1.8e-10 Score=116.90 Aligned_cols=105 Identities=7% Similarity=-0.059 Sum_probs=78.6
Q ss_pred hHHHHHHHHHHHhHHHhhCCHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhcCCCchHHHHHH
Q 014478 315 QMQETLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQ 394 (424)
Q Consensus 315 ~~~~~~~~~~~g~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~ 394 (424)
-+..+..+...|....+.|++++|+..++.+++++|+ +..++.+++.++.+++++++|+..+++++..+|+++.+++.+
T Consensus 82 ~~~~~~~~~~La~i~~~~g~~~ea~~~l~~~~~~~Pd-~~~a~~~~a~~L~~~~~~eeA~~~~~~~l~~~p~~~~~~~~~ 160 (694)
T PRK15179 82 YPHTELFQVLVARALEAAHRSDEGLAVWRGIHQRFPD-SSEAFILMLRGVKRQQGIEAGRAEIELYFSGGSSSAREILLE 160 (694)
T ss_pred ccccHHHHHHHHHHHHHcCCcHHHHHHHHHHHhhCCC-cHHHHHHHHHHHHHhccHHHHHHHHHHHhhcCCCCHHHHHHH
Confidence 3444666667777777777777777777777777777 777777777777777777777777777777777777777777
Q ss_pred HHHHHhCCChHHHHHHHHHHHhchhh
Q 014478 395 AACLFSLGMENDARETLKDGTNLEAK 420 (424)
Q Consensus 395 g~~~~~~~~~~~A~~~~~~al~l~~~ 420 (424)
|.++.++|+|++|++.|+++++.+|.
T Consensus 161 a~~l~~~g~~~~A~~~y~~~~~~~p~ 186 (694)
T PRK15179 161 AKSWDEIGQSEQADACFERLSRQHPE 186 (694)
T ss_pred HHHHHHhcchHHHHHHHHHHHhcCCC
Confidence 77777777777777777777776654
|
|
| >PLN02789 farnesyltranstransferase | Back alignment and domain information |
|---|
Probab=99.19 E-value=5.6e-10 Score=103.54 Aligned_cols=146 Identities=10% Similarity=-0.013 Sum_probs=112.2
Q ss_pred cccccccccchhHHHHHHHhccccCCcchhhhhh--hhhhhHhHHHHHHHHHHHhHHHhhC-CHHHHHHHHHHHhcCCCC
Q 014478 275 PLGEACSRLDLTAIHEILEGMGYKDDEGIANELS--FQMWTSQMQETLNSKKHGDTAFRAK-DFSTAIDCYTQFIDGGTM 351 (424)
Q Consensus 275 ~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~s--~~~~~~~~~~~~~~~~~g~~~~~~g-~~~~A~~~~~~ai~~~p~ 351 (424)
|+....-..+...+.+.|...-.. .+.....+. -....-.......+..+|..+...| ++++|+..++++++.+|+
T Consensus 26 ~~~~i~y~~~~~~a~~~~ra~l~~-~e~serAL~lt~~aI~lnP~~ytaW~~R~~iL~~L~~~l~eeL~~~~~~i~~npk 104 (320)
T PLN02789 26 PVVPIAYTPEFREAMDYFRAVYAS-DERSPRALDLTADVIRLNPGNYTVWHFRRLCLEALDADLEEELDFAEDVAEDNPK 104 (320)
T ss_pred cccceeeCHHHHHHHHHHHHHHHc-CCCCHHHHHHHHHHHHHCchhHHHHHHHHHHHHHcchhHHHHHHHHHHHHHHCCc
Confidence 444444445666666666664222 221112111 1222223334556777888888888 689999999999999999
Q ss_pred CCHHHHHHHHHHHHhcCCh--HHHHHHHHHHHhcCCCchHHHHHHHHHHHhCCChHHHHHHHHHHHhchhhcC
Q 014478 352 VSPTVYARRCLSYLMNDMP--QEALGDAMQAQVVSPDWPTALYLQAACLFSLGMENDARETLKDGTNLEAKKN 422 (424)
Q Consensus 352 ~~~~~~~~~~~~~~~~~~~--~~A~~~~~~al~~~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~~ 422 (424)
+..+|+.++.++.++++. ++++..++++|+++|+|..||+.+|.++..+|+|++|++++.++|++||.+.
T Consensus 105 -nyqaW~~R~~~l~~l~~~~~~~el~~~~kal~~dpkNy~AW~~R~w~l~~l~~~~eeL~~~~~~I~~d~~N~ 176 (320)
T PLN02789 105 -NYQIWHHRRWLAEKLGPDAANKELEFTRKILSLDAKNYHAWSHRQWVLRTLGGWEDELEYCHQLLEEDVRNN 176 (320)
T ss_pred -chHHhHHHHHHHHHcCchhhHHHHHHHHHHHHhCcccHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHCCCch
Confidence 999999999999999874 7899999999999999999999999999999999999999999999999764
|
|
| >PRK15331 chaperone protein SicA; Provisional | Back alignment and domain information |
|---|
Probab=99.19 E-value=1.9e-10 Score=93.41 Aligned_cols=98 Identities=9% Similarity=0.004 Sum_probs=93.8
Q ss_pred HHHHHHHHHhHHHhhCCHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhcCCCchHHHHHHHHH
Q 014478 318 ETLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAAC 397 (424)
Q Consensus 318 ~~~~~~~~g~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~ 397 (424)
..+.....|..+|.+|++++|...|.-...++|. +..++..+|.|+..+++|++|+..|..|..++++++...|..|.+
T Consensus 36 ~le~iY~~Ay~~y~~Gk~~eA~~~F~~L~~~d~~-n~~Y~~GLaa~~Q~~k~y~~Ai~~Y~~A~~l~~~dp~p~f~agqC 114 (165)
T PRK15331 36 MMDGLYAHAYEFYNQGRLDEAETFFRFLCIYDFY-NPDYTMGLAAVCQLKKQFQKACDLYAVAFTLLKNDYRPVFFTGQC 114 (165)
T ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCcC-cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccCCCCccchHHHH
Confidence 3456778899999999999999999999999999 999999999999999999999999999999999999999999999
Q ss_pred HHhCCChHHHHHHHHHHHh
Q 014478 398 LFSLGMENDARETLKDGTN 416 (424)
Q Consensus 398 ~~~~~~~~~A~~~~~~al~ 416 (424)
|+.+|+.++|+.+|..+++
T Consensus 115 ~l~l~~~~~A~~~f~~a~~ 133 (165)
T PRK15331 115 QLLMRKAAKARQCFELVNE 133 (165)
T ss_pred HHHhCCHHHHHHHHHHHHh
Confidence 9999999999999999987
|
|
| >KOG3087 consensus Serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.19 E-value=1.6e-10 Score=95.02 Aligned_cols=136 Identities=16% Similarity=0.137 Sum_probs=95.6
Q ss_pred CCCcccceeeeecceeccc-ccCC--------CchhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCC-CC
Q 014478 2 GGRCSKFSICWFHCHLKSS-VLES--------SDLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPN-ET 71 (424)
Q Consensus 2 G~~g~v~~~~~~~~~v~~~-~~~~--------~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~-gs 71 (424)
|+-+.|+.+.|.+....+| .+.+ ....+.+..+|+++|.++.--.|.--.-++.+...-.|+|||++| .+
T Consensus 18 GAEArv~~~~~~Ge~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~~~~GI~~P~l~~~D~~~~~i~ME~~~g~~~ 97 (229)
T KOG3087|consen 18 GAEARVPRGSFSGEAAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKCRALGIPAPRLIFIDTYGGQIYMEFIDGAST 97 (229)
T ss_pred cceeeEeeeccCCceeEEeecccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEEEEecCCCeEEEEeccchhH
Confidence 5566778888877663333 2211 112356778899999998644443333344455556899999987 57
Q ss_pred HHhHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCC---eEEccccccccC
Q 014478 72 LAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGN---PRLSSFGLMKNS 138 (424)
Q Consensus 72 L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~---~kl~Dfg~~~~~ 138 (424)
+.+++...........-...++.+|-..+.-||..+ +||+||..+||++..++. +.++|||++...
T Consensus 98 vk~~i~~~~~~~~~d~~~~~~~~~iG~~igklH~nd-iiHGDLTTSNill~~~~~~~~~~lIdfgls~~s 166 (229)
T KOG3087|consen 98 VKDFILSTMEDESEDEGLAELARRIGELIGKLHDND-IIHGDLTTSNILLRSDGNQITPILIDFGLSSVS 166 (229)
T ss_pred HHHHHHHHccCcccchhHHHHHHHHHHHHHHhhhCC-eecccccccceEEecCCCcCceEEEeecchhcc
Confidence 888876533333334444788999999999999999 999999999999966653 589999987653
|
|
| >KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.19 E-value=1.7e-11 Score=117.76 Aligned_cols=198 Identities=16% Similarity=0.118 Sum_probs=146.6
Q ss_pred HHHHHHHhcC-CCcCcceeEEEEEeCCeeeEEEecCCCCCHHhHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCccc
Q 014478 33 LEEAKAVGNL-RSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALY 111 (424)
Q Consensus 33 ~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH 111 (424)
+.|+-+...+ .|.|++..+..+...+..++--|||+++++...+. ....+++..++++..|++.++.++|++. ++|
T Consensus 313 l~ev~l~~~l~~~~~~~g~~~~W~~~r~~~ip~e~~~~~s~~l~~~--~~~~~d~~~~~~~~~q~~~~l~~i~s~~-~~~ 389 (524)
T KOG0601|consen 313 LGEVILEAILGSHLPSVGKNSSWSQLRQGYIPLEFCEGGSSSLRSV--TSQMLDEDPRLRLTAQILTALNVIHSKL-FVH 389 (524)
T ss_pred hhhhhHhhHhhcccccCCCCCCccccccccCchhhhcCcchhhhhH--HHHhcCcchhhhhHHHHHhccccccchh-hhc
Confidence 4577776666 69999999888888888899999999998887662 3567888899999999999999999999 999
Q ss_pred ccCCCCCeeecCC-CCeEEccccccccCCCC-CccccCccCC--CccccccCCCCCCcceehhHHHHHHHhhCCCCCCch
Q 014478 112 HDLNAYRILFDKD-GNPRLSSFGLMKNSRDG-KSYSTNLAFT--PPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSH 187 (424)
Q Consensus 112 ~dikp~Nill~~~-~~~kl~Dfg~~~~~~~~-~~~~gt~~y~--aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~ 187 (424)
+|+||+||++..+ +..+++|||......-. ......-.++ ++.......+..+.|++|||..+.+.+++....+..
T Consensus 390 ~d~~psni~i~~~~~~~~~~~~~~~t~~~~~~~~~~~~~r~~p~~~~~~e~~~~~~~~~~~sl~~~~~e~~~~~~ls~~~ 469 (524)
T KOG0601|consen 390 LDVKPSNILISNDGFFSKLGDFGCWTRLAFSSGVFHHIDRLYPIAEILLEDYPHLSKADIFSLGLSVDEAITGSPLSESG 469 (524)
T ss_pred ccccccceeeccchhhhhccccccccccceecccccccccccccchhhccccccccccccccccccccccccCcccCccc
Confidence 9999999999876 78899999987653322 2222233344 444444556788999999999999999998443321
Q ss_pred hhHHHhhhhhhHhhhcccCCCCCchhHHHHHHHHHHhcccCcCCCCCHHHHHHHH
Q 014478 188 ALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERPNAKSLVISL 242 (424)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~~~~~l 242 (424)
..+..+.... .. .......++..+.+.+...++..||++.++..+.
T Consensus 470 -------~~~~~i~~~~-~p-~~~~~~~~~q~~~kv~~~~~~~~~~l~~~l~~~~ 515 (524)
T KOG0601|consen 470 -------VQSLTIRSGD-TP-NLPGLKLQLQVLLKVMINPDRKRRPSAVELSLHS 515 (524)
T ss_pred -------ccceeeeccc-cc-CCCchHHhhhhhhhhhcCCccccchhhhhhcccc
Confidence 1111111111 11 1223347788899999999999999998886553
|
|
| >cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain | Back alignment and domain information |
|---|
Probab=99.17 E-value=1.2e-10 Score=99.66 Aligned_cols=99 Identities=11% Similarity=0.174 Sum_probs=77.0
Q ss_pred HHHHHHhcCC--CcCcceeEEEEEeCCeeeEEEecCCCCCHHh-HhccCCCCCCCHHHHHHHHHHHHHHHHHH-HhCCCc
Q 014478 34 EEAKAVGNLR--SERLANLIGCCYEADERLLVAEFMPNETLAK-HLFHWETQPMKWAMRLRVALYLAQALEYC-SSKGRA 109 (424)
Q Consensus 34 ~E~~~l~~l~--h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~-~l~~~~~~~l~~~~~~~i~~qi~~~L~~l-H~~~~i 109 (424)
+|++.|+++. .-+++..+++ ..-+|||||+.++.+.. .+. ...++..+...+..+++.+|..| |+.+ +
T Consensus 75 kE~r~L~rl~~~Gv~vP~pi~~----~~~~lvME~Ig~~~~~~~~Lk---d~~~~~~~~~~i~~~i~~~l~~l~H~~g-l 146 (197)
T cd05146 75 KEMHNLKRMQKAGIPCPEVVVL----KKHVLVMSFIGDDQVPAPKLK---DAKLNDEEMKNAYYQVLSMMKQLYKECN-L 146 (197)
T ss_pred HHHHHHHHHHHcCCCCCeEEEe----cCCEEEEEEcCCCCccchhhh---ccccCHHHHHHHHHHHHHHHHHHHHhCC-e
Confidence 7999999994 4678888875 34589999997654422 222 22455567778899999999999 7888 9
Q ss_pred ccccCCCCCeeecCCCCeEEccccccccCCCC
Q 014478 110 LYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG 141 (424)
Q Consensus 110 vH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~ 141 (424)
|||||++.||+++ ++.+.|+|||.+....+.
T Consensus 147 VHGDLs~~NIL~~-~~~v~iIDF~qav~~~hp 177 (197)
T cd05146 147 VHADLSEYNMLWH-DGKVWFIDVSQSVEPTHP 177 (197)
T ss_pred ecCCCCHHHEEEE-CCcEEEEECCCceeCCCC
Confidence 9999999999997 467999999988776543
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown. |
| >PF13432 TPR_16: Tetratricopeptide repeat; PDB: 3CVP_A 3CVL_A 3CVQ_A 3CV0_A 2GW1_B 3CVN_A 3QKY_A 2PL2_B | Back alignment and domain information |
|---|
Probab=99.16 E-value=1.1e-10 Score=81.74 Aligned_cols=63 Identities=22% Similarity=0.245 Sum_probs=44.8
Q ss_pred HHHHHHHhcCChHHHHHHHHHHHhcCCCchHHHHHHHHHHHhCCChHHHHHHHHHHHhchhhc
Q 014478 359 RRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAACLFSLGMENDARETLKDGTNLEAKK 421 (424)
Q Consensus 359 ~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~ 421 (424)
.+|..+.+.|++++|+..|+++++.+|+++.+++.+|.++..+|++++|+..|+++++++|++
T Consensus 2 ~~a~~~~~~g~~~~A~~~~~~~l~~~P~~~~a~~~lg~~~~~~g~~~~A~~~~~~a~~~~P~~ 64 (65)
T PF13432_consen 2 ALARALYQQGDYDEAIAAFEQALKQDPDNPEAWYLLGRILYQQGRYDEALAYYERALELDPDN 64 (65)
T ss_dssp HHHHHHHHCTHHHHHHHHHHHHHCCSTTHHHHHHHHHHHHHHTT-HHHHHHHHHHHHHHSTT-
T ss_pred hHHHHHHHcCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCcCC
Confidence 456677777777777777777777777777777777777777777777777777777777753
|
|
| >PRK12370 invasion protein regulator; Provisional | Back alignment and domain information |
|---|
Probab=99.15 E-value=3.2e-10 Score=114.35 Aligned_cols=86 Identities=16% Similarity=0.071 Sum_probs=52.3
Q ss_pred CHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhcCCCchHHHHHHHHHHHhCCChHHHHHHHHH
Q 014478 334 DFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAACLFSLGMENDARETLKD 413 (424)
Q Consensus 334 ~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~ 413 (424)
++++|+..+++|++++|+ +..++..+|.++...|++++|+..|++|++++|+++.+|+.+|.++..+|++++|+..|++
T Consensus 319 ~~~~A~~~~~~Al~ldP~-~~~a~~~lg~~~~~~g~~~~A~~~~~~Al~l~P~~~~a~~~lg~~l~~~G~~~eAi~~~~~ 397 (553)
T PRK12370 319 AMIKAKEHAIKATELDHN-NPQALGLLGLINTIHSEYIVGSLLFKQANLLSPISADIKYYYGWNLFMAGQLEEALQTINE 397 (553)
T ss_pred HHHHHHHHHHHHHhcCCC-CHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHCCCHHHHHHHHHH
Confidence 355666666666666665 5556666666666666666666666666666666666666666666666666666666666
Q ss_pred HHhchhh
Q 014478 414 GTNLEAK 420 (424)
Q Consensus 414 al~l~~~ 420 (424)
+++++|.
T Consensus 398 Al~l~P~ 404 (553)
T PRK12370 398 CLKLDPT 404 (553)
T ss_pred HHhcCCC
Confidence 6666654
|
|
| >PRK15359 type III secretion system chaperone protein SscB; Provisional | Back alignment and domain information |
|---|
Probab=99.15 E-value=2.4e-10 Score=93.81 Aligned_cols=84 Identities=14% Similarity=0.017 Sum_probs=79.2
Q ss_pred HHHHHHHHHhHHHhhCCHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhcCCCchHHHHHHHHH
Q 014478 318 ETLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAAC 397 (424)
Q Consensus 318 ~~~~~~~~g~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~ 397 (424)
....+...|..+.+.|++++|+..|.++++++|+ ++.+++++|.++..+|++++|+..|++|++++|+++.++.++|.+
T Consensus 57 ~~~a~~~lg~~~~~~g~~~~A~~~y~~Al~l~p~-~~~a~~~lg~~l~~~g~~~eAi~~~~~Al~~~p~~~~~~~~~~~~ 135 (144)
T PRK15359 57 SWRAHIALAGTWMMLKEYTTAINFYGHALMLDAS-HPEPVYQTGVCLKMMGEPGLAREAFQTAIKMSYADASWSEIRQNA 135 (144)
T ss_pred cHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCC-CcHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHHHHHHHH
Confidence 4667788999999999999999999999999999 999999999999999999999999999999999999999999998
Q ss_pred HHhCC
Q 014478 398 LFSLG 402 (424)
Q Consensus 398 ~~~~~ 402 (424)
+..++
T Consensus 136 ~~~l~ 140 (144)
T PRK15359 136 QIMVD 140 (144)
T ss_pred HHHHH
Confidence 86653
|
|
| >PRK10370 formate-dependent nitrite reductase complex subunit NrfG; Provisional | Back alignment and domain information |
|---|
Probab=99.14 E-value=4e-10 Score=97.62 Aligned_cols=91 Identities=16% Similarity=0.137 Sum_probs=85.4
Q ss_pred hhCCHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhcCCCchHHHHHHHHHH-HhCCC--hHHH
Q 014478 331 RAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAACL-FSLGM--ENDA 407 (424)
Q Consensus 331 ~~g~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~-~~~~~--~~~A 407 (424)
..++.++++..+.++++.+|+ +..+|.++|.+|..+|++++|+..|++|++++|+++..++.+|.++ ...|+ +++|
T Consensus 51 ~~~~~~~~i~~l~~~L~~~P~-~~~~w~~Lg~~~~~~g~~~~A~~a~~~Al~l~P~~~~~~~~lA~aL~~~~g~~~~~~A 129 (198)
T PRK10370 51 SQQTPEAQLQALQDKIRANPQ-NSEQWALLGEYYLWRNDYDNALLAYRQALQLRGENAELYAALATVLYYQAGQHMTPQT 129 (198)
T ss_pred CchhHHHHHHHHHHHHHHCCC-CHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCCCCcHHH
Confidence 367889999999999999999 9999999999999999999999999999999999999999999985 67787 5999
Q ss_pred HHHHHHHHhchhhcC
Q 014478 408 RETLKDGTNLEAKKN 422 (424)
Q Consensus 408 ~~~~~~al~l~~~~~ 422 (424)
.+.++++++++|++.
T Consensus 130 ~~~l~~al~~dP~~~ 144 (198)
T PRK10370 130 REMIDKALALDANEV 144 (198)
T ss_pred HHHHHHHHHhCCCCh
Confidence 999999999999853
|
|
| >PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional | Back alignment and domain information |
|---|
Probab=99.14 E-value=5.1e-10 Score=101.18 Aligned_cols=106 Identities=12% Similarity=0.083 Sum_probs=83.1
Q ss_pred HHHHHHHHHhcCCC--cCcceeEEEEEeC-----CeeeEEEecCCCC-CHHhHhccCCCCCCCHHHHHHHHHHHHHHHHH
Q 014478 31 LNLEEAKAVGNLRS--ERLANLIGCCYEA-----DERLLVAEFMPNE-TLAKHLFHWETQPMKWAMRLRVALYLAQALEY 102 (424)
Q Consensus 31 ~~~~E~~~l~~l~h--~~iv~~~~~~~~~-----~~~~lv~e~~~~g-sL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~ 102 (424)
.+.+|.+.+..|.. -..+..++++... ..-+||||++++. +|.+++......+.+......++.+++..+.-
T Consensus 74 ~a~rE~~~l~~L~~~GIptP~pVa~~e~~~~~~~~~s~LVte~l~~~~sL~~~~~~~~~~~~~~~~~~~ll~~la~~i~~ 153 (268)
T PRK15123 74 GADREWRAIHRLHEVGVDTMTGVAFGERGSNPATRTSFIITEDLAPTISLEDYCADWATNPPDPRLKRMLIKRVATMVRD 153 (268)
T ss_pred HHHHHHHHHHHHHHcCCCCCCeeEEEEecCCCccceeEEEEeeCCCCccHHHHHHhhcccCCCHHHHHHHHHHHHHHHHH
Confidence 47789999988843 3345556665432 2467999999886 89998854323456677888999999999999
Q ss_pred HHhCCCcccccCCCCCeeecC-------CCCeEEcccccccc
Q 014478 103 CSSKGRALYHDLNAYRILFDK-------DGNPRLSSFGLMKN 137 (424)
Q Consensus 103 lH~~~~ivH~dikp~Nill~~-------~~~~kl~Dfg~~~~ 137 (424)
||+.| |+|+|++++|||++. ++.+.++||+.+..
T Consensus 154 LH~~G-i~HgDL~~~NiLl~~~~~~~~~~~~~~LIDl~r~~~ 194 (268)
T PRK15123 154 MHAAG-INHRDCYICHFLLHLPFPGREEDLKLSVIDLHRAQI 194 (268)
T ss_pred HHHCc-CccCCCChhhEEEeccccCCCCCceEEEEECCcccc
Confidence 99999 999999999999975 45789999997753
|
|
| >KOG0547 consensus Translocase of outer mitochondrial membrane complex, subunit TOM70/TOM72 [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
Probab=99.13 E-value=5.4e-10 Score=103.99 Aligned_cols=103 Identities=17% Similarity=0.210 Sum_probs=96.9
Q ss_pred HHHHHHHHHhHHHhhCCHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhcCCCchHHHHHHHHH
Q 014478 318 ETLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAAC 397 (424)
Q Consensus 318 ~~~~~~~~g~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~ 397 (424)
-+..+.-.|--++-.|++.+|-+.++++|+++|. +...|..+|..|...++-++-..+|++|..+||+|++.||.+|..
T Consensus 325 ~A~al~~~gtF~fL~g~~~~a~~d~~~~I~l~~~-~~~lyI~~a~~y~d~~~~~~~~~~F~~A~~ldp~n~dvYyHRgQm 403 (606)
T KOG0547|consen 325 MAEALLLRGTFHFLKGDSLGAQEDFDAAIKLDPA-FNSLYIKRAAAYADENQSEKMWKDFNKAEDLDPENPDVYYHRGQM 403 (606)
T ss_pred HHHHHHHhhhhhhhcCCchhhhhhHHHHHhcCcc-cchHHHHHHHHHhhhhccHHHHHHHHHHHhcCCCCCchhHhHHHH
Confidence 3567778899999999999999999999999999 777799999999999999999999999999999999999999999
Q ss_pred HHhCCChHHHHHHHHHHHhchhhc
Q 014478 398 LFSLGMENDARETLKDGTNLEAKK 421 (424)
Q Consensus 398 ~~~~~~~~~A~~~~~~al~l~~~~ 421 (424)
++-+++|++|+++|++|++|+|.+
T Consensus 404 ~flL~q~e~A~aDF~Kai~L~pe~ 427 (606)
T KOG0547|consen 404 RFLLQQYEEAIADFQKAISLDPEN 427 (606)
T ss_pred HHHHHHHHHHHHHHHHHhhcChhh
Confidence 999999999999999999999975
|
|
| >PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed | Back alignment and domain information |
|---|
Probab=99.13 E-value=8.8e-11 Score=115.59 Aligned_cols=130 Identities=14% Similarity=0.059 Sum_probs=86.7
Q ss_pred CCCcccceeeee--cceecccccCCCchh-----------------------------------h------hHHHHHHHH
Q 014478 2 GGRCSKFSICWF--HCHLKSSVLESSDLG-----------------------------------E------TLNLEEAKA 38 (424)
Q Consensus 2 G~~g~v~~~~~~--~~~v~~~~~~~~~~~-----------------------------------~------~~~~~E~~~ 38 (424)
|++|.||.+... +..|++|+..+.-.. . -+|.+|+..
T Consensus 130 aSiaQVh~A~l~~~G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e~~~~l~~ElD~~~Ea~N 209 (537)
T PRK04750 130 ASIAQVHFARLKDNGREVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREVVAEFEKTLHDELDLMREAAN 209 (537)
T ss_pred CCccEEEEEEECCCCCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHHHHHHhhCHHHHHHH
Confidence 788999999873 788999988644210 0 134556666
Q ss_pred HhcCC----CcCcceeEEEEEe-CCeeeEEEecCCCCCHHhHhccCCCCC-----CCHHHHHHHHHHHHHHHHHHHhCCC
Q 014478 39 VGNLR----SERLANLIGCCYE-ADERLLVAEFMPNETLAKHLFHWETQP-----MKWAMRLRVALYLAQALEYCSSKGR 108 (424)
Q Consensus 39 l~~l~----h~~iv~~~~~~~~-~~~~~lv~e~~~~gsL~~~l~~~~~~~-----l~~~~~~~i~~qi~~~L~~lH~~~~ 108 (424)
+.++. +.+.+.+-.++.+ ....+|||||++|++|.++-.- .... +....+..++.|+ +..|
T Consensus 210 ~~~~~~~f~~~~~v~VP~v~~d~st~~VLvmE~i~G~~l~d~~~l-~~~g~d~~~la~~~v~~~~~Qi-------f~~G- 280 (537)
T PRK04750 210 ASQLRRNFEDSDMLYVPEVYWDYCSETVMVMERMYGIPVSDVAAL-RAAGTDMKLLAERGVEVFFTQV-------FRDG- 280 (537)
T ss_pred HHHHHHHccCCCCeecceeecccCCCceEEEeeecCccHHhHHHH-HhcCCCHHHHHHHHHHHHHHHH-------HhCC-
Confidence 66652 4444444444433 3456899999999999875211 1122 2233333344444 4578
Q ss_pred cccccCCCCCeeecCCC----CeEEccccccccCCC
Q 014478 109 ALYHDLNAYRILFDKDG----NPRLSSFGLMKNSRD 140 (424)
Q Consensus 109 ivH~dikp~Nill~~~~----~~kl~Dfg~~~~~~~ 140 (424)
++|+|+||.||+++.+| .++++|||++.....
T Consensus 281 ffHaDpHPGNIlv~~~g~~~~~i~llDFGivg~l~~ 316 (537)
T PRK04750 281 FFHADMHPGNIFVSYDPPENPRYIALDFGIVGSLNK 316 (537)
T ss_pred eeeCCCChHHeEEecCCCCCCeEEEEecceEEECCH
Confidence 99999999999999888 899999999876543
|
|
| >KOG1155 consensus Anaphase-promoting complex (APC), Cdc23 subunit [Cell cycle control, cell division, chromosome partitioning; Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=99.12 E-value=2.5e-10 Score=105.57 Aligned_cols=96 Identities=10% Similarity=0.036 Sum_probs=82.1
Q ss_pred HhHHHhhCCHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhcCCCchHHHHHHHHHHHhCCChH
Q 014478 326 GDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAACLFSLGMEN 405 (424)
Q Consensus 326 g~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~~~~~~ 405 (424)
||-|.-+++++.|+.+|++|++++|. ...+|..+|.-|..+++...|++.|++|++++|.+..|||.+|++|..++...
T Consensus 337 aNYYSlr~eHEKAv~YFkRALkLNp~-~~~aWTLmGHEyvEmKNt~AAi~sYRrAvdi~p~DyRAWYGLGQaYeim~Mh~ 415 (559)
T KOG1155|consen 337 ANYYSLRSEHEKAVMYFKRALKLNPK-YLSAWTLMGHEYVEMKNTHAAIESYRRAVDINPRDYRAWYGLGQAYEIMKMHF 415 (559)
T ss_pred hhHHHHHHhHHHHHHHHHHHHhcCcc-hhHHHHHhhHHHHHhcccHHHHHHHHHHHhcCchhHHHHhhhhHHHHHhcchH
Confidence 77777888888888888888888888 88888888888888888888888888888888888888888888888888888
Q ss_pred HHHHHHHHHHhchhhcC
Q 014478 406 DARETLKDGTNLEAKKN 422 (424)
Q Consensus 406 ~A~~~~~~al~l~~~~~ 422 (424)
=|+-+|++|+++-|.+.
T Consensus 416 YaLyYfqkA~~~kPnDs 432 (559)
T KOG1155|consen 416 YALYYFQKALELKPNDS 432 (559)
T ss_pred HHHHHHHHHHhcCCCch
Confidence 88888888888877653
|
|
| >PF13432 TPR_16: Tetratricopeptide repeat; PDB: 3CVP_A 3CVL_A 3CVQ_A 3CV0_A 2GW1_B 3CVN_A 3QKY_A 2PL2_B | Back alignment and domain information |
|---|
Probab=99.12 E-value=2.6e-10 Score=79.94 Aligned_cols=64 Identities=19% Similarity=0.224 Sum_probs=60.2
Q ss_pred HHHhHHHhhCCHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhcCCCch
Q 014478 324 KHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWP 388 (424)
Q Consensus 324 ~~g~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~ 388 (424)
.+|..+++.|+|++|++.|+++++.+|+ +..+++.+|.++..+|++++|+..|+++++++|+++
T Consensus 2 ~~a~~~~~~g~~~~A~~~~~~~l~~~P~-~~~a~~~lg~~~~~~g~~~~A~~~~~~a~~~~P~~p 65 (65)
T PF13432_consen 2 ALARALYQQGDYDEAIAAFEQALKQDPD-NPEAWYLLGRILYQQGRYDEALAYYERALELDPDNP 65 (65)
T ss_dssp HHHHHHHHCTHHHHHHHHHHHHHCCSTT-HHHHHHHHHHHHHHTT-HHHHHHHHHHHHHHSTT-H
T ss_pred hHHHHHHHcCCHHHHHHHHHHHHHHCCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCcCCC
Confidence 5789999999999999999999999999 999999999999999999999999999999999985
|
|
| >COG5010 TadD Flp pilus assembly protein TadD, contains TPR repeats [Intracellular trafficking and secretion] | Back alignment and domain information |
|---|
Probab=99.10 E-value=1e-09 Score=94.91 Aligned_cols=100 Identities=16% Similarity=0.032 Sum_probs=93.7
Q ss_pred HHHHHHHHhHHHhhCCHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhcCCCchHHHHHHHHHH
Q 014478 319 TLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAACL 398 (424)
Q Consensus 319 ~~~~~~~g~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~ 398 (424)
...+..+|...++.|+|.+|+..+.++..++|+ +..+|+.+|.+|.+.|++++|-..|.+|+++.|+++....|+|..|
T Consensus 100 ~~ll~~~gk~~~~~g~~~~A~~~~rkA~~l~p~-d~~~~~~lgaaldq~Gr~~~Ar~ay~qAl~L~~~~p~~~nNlgms~ 178 (257)
T COG5010 100 RELLAAQGKNQIRNGNFGEAVSVLRKAARLAPT-DWEAWNLLGAALDQLGRFDEARRAYRQALELAPNEPSIANNLGMSL 178 (257)
T ss_pred HHHHHHHHHHHHHhcchHHHHHHHHHHhccCCC-ChhhhhHHHHHHHHccChhHHHHHHHHHHHhccCCchhhhhHHHHH
Confidence 334555899999999999999999999999999 9999999999999999999999999999999999999999999999
Q ss_pred HhCCChHHHHHHHHHHHhchh
Q 014478 399 FSLGMENDARETLKDGTNLEA 419 (424)
Q Consensus 399 ~~~~~~~~A~~~~~~al~l~~ 419 (424)
+-.||++.|...+..+...-+
T Consensus 179 ~L~gd~~~A~~lll~a~l~~~ 199 (257)
T COG5010 179 LLRGDLEDAETLLLPAYLSPA 199 (257)
T ss_pred HHcCCHHHHHHHHHHHHhCCC
Confidence 999999999999999876544
|
|
| >PRK12370 invasion protein regulator; Provisional | Back alignment and domain information |
|---|
Probab=99.10 E-value=8.1e-10 Score=111.42 Aligned_cols=99 Identities=11% Similarity=-0.056 Sum_probs=83.6
Q ss_pred HHHHHHHHhHHHhhCCHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhcCCCchHHHHHHHHHH
Q 014478 319 TLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAACL 398 (424)
Q Consensus 319 ~~~~~~~g~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~ 398 (424)
+..+...|..+...|++++|+..|++|++++|+ +..+++++|.++..+|++++|+..+++|++++|.++.+++.++.++
T Consensus 338 ~~a~~~lg~~~~~~g~~~~A~~~~~~Al~l~P~-~~~a~~~lg~~l~~~G~~~eAi~~~~~Al~l~P~~~~~~~~~~~~~ 416 (553)
T PRK12370 338 PQALGLLGLINTIHSEYIVGSLLFKQANLLSPI-SADIKYYYGWNLFMAGQLEEALQTINECLKLDPTRAAAGITKLWIT 416 (553)
T ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCChhhHHHHHHHH
Confidence 344556788888888899999999999999988 8888888888888889999999999999999998888877777778
Q ss_pred HhCCChHHHHHHHHHHHhch
Q 014478 399 FSLGMENDARETLKDGTNLE 418 (424)
Q Consensus 399 ~~~~~~~~A~~~~~~al~l~ 418 (424)
+.+|++++|+..++++++.+
T Consensus 417 ~~~g~~eeA~~~~~~~l~~~ 436 (553)
T PRK12370 417 YYHTGIDDAIRLGDELRSQH 436 (553)
T ss_pred HhccCHHHHHHHHHHHHHhc
Confidence 88888888988888888764
|
|
| >TIGR03302 OM_YfiO outer membrane assembly lipoprotein YfiO | Back alignment and domain information |
|---|
Probab=99.10 E-value=7.2e-10 Score=99.38 Aligned_cols=103 Identities=17% Similarity=0.220 Sum_probs=95.4
Q ss_pred HHHHHHHHHhHHHhhCCHHHHHHHHHHHhcCCCCCCH---HHHHHHHHHHHhcCChHHHHHHHHHHHhcCCCchH---HH
Q 014478 318 ETLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSP---TVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPT---AL 391 (424)
Q Consensus 318 ~~~~~~~~g~~~~~~g~~~~A~~~~~~ai~~~p~~~~---~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~---a~ 391 (424)
.+..++..|..++..|+|++|+..|+++++.+|+ ++ .+++.+|.+|.++|++++|+..++++++.+|+++. ++
T Consensus 32 ~~~~~~~~g~~~~~~~~~~~A~~~~~~~~~~~p~-~~~~~~a~~~la~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~a~ 110 (235)
T TIGR03302 32 PAEELYEEAKEALDSGDYTEAIKYFEALESRYPF-SPYAEQAQLDLAYAYYKSGDYAEAIAAADRFIRLHPNHPDADYAY 110 (235)
T ss_pred CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-chhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHCcCCCchHHHH
Confidence 4567789999999999999999999999999998 54 67899999999999999999999999999998887 79
Q ss_pred HHHHHHHHhC--------CChHHHHHHHHHHHhchhhc
Q 014478 392 YLQAACLFSL--------GMENDARETLKDGTNLEAKK 421 (424)
Q Consensus 392 ~~~g~~~~~~--------~~~~~A~~~~~~al~l~~~~ 421 (424)
+.+|.++..+ |++++|+..|+++++.+|+.
T Consensus 111 ~~~g~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~p~~ 148 (235)
T TIGR03302 111 YLRGLSNYNQIDRVDRDQTAAREAFEAFQELIRRYPNS 148 (235)
T ss_pred HHHHHHHHHhcccccCCHHHHHHHHHHHHHHHHHCCCC
Confidence 9999999987 89999999999999999975
|
Members of this protein family include YfiO, a near-essential protein of the outer membrane, part of a complex involved in protein insertion into the bacterial outer membrane. Many proteins in this family are annotated as ComL, based on the involvement of this protein in natural transformation with exogenous DNA in Neisseria gonorrhoeae. This protein family shows sequence similarity to, but is distinct from, the tol-pal system protein YbgF (TIGR02795). |
| >TIGR02521 type_IV_pilW type IV pilus biogenesis/stability protein PilW | Back alignment and domain information |
|---|
Probab=99.09 E-value=1.7e-09 Score=96.06 Aligned_cols=103 Identities=13% Similarity=0.069 Sum_probs=86.8
Q ss_pred HHHHHHHHHhHHHhhCCHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhcC--CCchHHHHHHH
Q 014478 318 ETLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVS--PDWPTALYLQA 395 (424)
Q Consensus 318 ~~~~~~~~g~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~--p~~~~a~~~~g 395 (424)
....+...|..++..|++++|++.|.++++.+|. +..++.++|.++...|++++|+..+++++... |.....++++|
T Consensus 64 ~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~~~-~~~~~~~~~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~l~ 142 (234)
T TIGR02521 64 DYLAYLALALYYQQLGELEKAEDSFRRALTLNPN-NGDVLNNYGTFLCQQGKYEQAMQQFEQAIEDPLYPQPARSLENAG 142 (234)
T ss_pred cHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCC-CHHHHHHHHHHHHHcccHHHHHHHHHHHHhccccccchHHHHHHH
Confidence 3456667788888889999999999999998888 88888889999999999999999999988753 56677888889
Q ss_pred HHHHhCCChHHHHHHHHHHHhchhhc
Q 014478 396 ACLFSLGMENDARETLKDGTNLEAKK 421 (424)
Q Consensus 396 ~~~~~~~~~~~A~~~~~~al~l~~~~ 421 (424)
.++..+|++++|...|+++++.+|..
T Consensus 143 ~~~~~~g~~~~A~~~~~~~~~~~~~~ 168 (234)
T TIGR02521 143 LCALKAGDFDKAEKYLTRALQIDPQR 168 (234)
T ss_pred HHHHHcCCHHHHHHHHHHHHHhCcCC
Confidence 99999999999999999998888753
|
Members of this family are designated PilF in ref (PubMed:8973346) and PilW in ref (PubMed:15612916). This outer membrane protein is required both for pilus stability and for pilus function such as adherence to human cells. Members of this family contain copies of the TPR (tetratricopeptide repeat) domain. |
| >KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only] | Back alignment and domain information |
|---|
Probab=99.07 E-value=1.1e-10 Score=118.32 Aligned_cols=187 Identities=19% Similarity=0.189 Sum_probs=139.9
Q ss_pred CCcCcceeEEEEEeCCeeeEEEecCCCCCHHhHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeec
Q 014478 43 RSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFD 122 (424)
Q Consensus 43 ~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~ 122 (424)
.+|-++...--+......+|+++|+.|++|...++. .++.+.+-....+..+..++++||... ++|+|++|.|+++.
T Consensus 862 ~~P~v~~~~~s~~~rsP~~L~~~~~~~~~~~Skl~~--~~~~saepaRs~i~~~vqs~e~L~s~~-r~h~~~~p~~~l~~ 938 (1205)
T KOG0606|consen 862 RSPAVVRSFPSFPCRSPLPLVGHYLNGGDLPSKLHN--SGCLSAEPARSPILERVQSLESLHSSL-RKHRDLKPDSLLIA 938 (1205)
T ss_pred CCCceecccCCCCCCCCcchhhHHhccCCchhhhhc--CCCcccccccchhHHHHhhhhccccch-hhcccccccchhhc
Confidence 445555555445556778999999999999998864 345666666777888899999999998 99999999999999
Q ss_pred CCCCeEEccccccccCC-------C----------------------------CCccccCccCCCccccccCCCCCCcce
Q 014478 123 KDGNPRLSSFGLMKNSR-------D----------------------------GKSYSTNLAFTPPEYMRTGRVTPESVV 167 (424)
Q Consensus 123 ~~~~~kl~Dfg~~~~~~-------~----------------------------~~~~~gt~~y~aPE~~~~~~~~~~~Dv 167 (424)
.+|+.+++|||...... . .....+|+.|.+||...+......+|.
T Consensus 939 ~~gh~~l~~~~t~~~vg~~~p~~~~sg~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~t~~~laPe~~lg~~hgs~ad~ 1018 (1205)
T KOG0606|consen 939 YDGHRPLTDFGTLSKVGLIPPTTDLSGPSSSGTPRRLSRSERRPQLSADEARRKHAVVGTPDYLAPEILLGRRHGSAADW 1018 (1205)
T ss_pred ccCCcccCccccccccccccCcCCcccccccCccccccccccccccccchhhccccccCCCcccCCcccccccCCCcchh
Confidence 99999999998422111 0 011246899999999998888889999
Q ss_pred ehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhcccC-CCCCchhHHHHHHHHHHhcccCcCCCCCHH
Q 014478 168 YSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALE-GHFSNDEGTELVRLASRCLQSEARERPNAK 236 (424)
Q Consensus 168 ~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ 236 (424)
|++|++++|.++|..||... ...+.+..+...... ...+...+.+..+++.+.+..+|.+|..+.
T Consensus 1019 ~~~g~~l~e~l~g~pp~na~----tpq~~f~ni~~~~~~~p~g~~~~s~~aq~~~~~ll~~~~~qr~~a~ 1084 (1205)
T KOG0606|consen 1019 WSSGVCLFEVLTGIPPFNAE----TPQQIFENILNRDIPWPEGPEEGSYEAQDLINRLLTEEPTQRLGAK 1084 (1205)
T ss_pred hhhhhhhhhhhcCCCCCCCc----chhhhhhccccCCCCCCCCccccChhhhhhhhhhhccCchhccCcc
Confidence 99999999999999776653 222222222222111 123445678899999999999999996554
|
|
| >KOG1126 consensus DNA-binding cell division cycle control protein [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.07 E-value=2.4e-10 Score=110.17 Aligned_cols=96 Identities=14% Similarity=0.140 Sum_probs=49.7
Q ss_pred HHHhHHHhhCCHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhcCCCchHHHHHHHHHHHhCCC
Q 014478 324 KHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAACLFSLGM 403 (424)
Q Consensus 324 ~~g~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~~~~ 403 (424)
..|..+.....|+.|..+|+.||..+|. .+-+|+-+|.+|.++++++.|.-.|++|++++|.+.......|..+.++|+
T Consensus 460 LlGhE~~~~ee~d~a~~~fr~Al~~~~r-hYnAwYGlG~vy~Kqek~e~Ae~~fqkA~~INP~nsvi~~~~g~~~~~~k~ 538 (638)
T KOG1126|consen 460 LLGHESIATEEFDKAMKSFRKALGVDPR-HYNAWYGLGTVYLKQEKLEFAEFHFQKAVEINPSNSVILCHIGRIQHQLKR 538 (638)
T ss_pred hcCChhhhhHHHHhHHHHHHhhhcCCch-hhHHHHhhhhheeccchhhHHHHHHHhhhcCCccchhHHhhhhHHHHHhhh
Confidence 3444444444555555555555555555 555555555555555555555555555555555555555555555555555
Q ss_pred hHHHHHHHHHHHhchhh
Q 014478 404 ENDARETLKDGTNLEAK 420 (424)
Q Consensus 404 ~~~A~~~~~~al~l~~~ 420 (424)
.++|+..|++|+.+||+
T Consensus 539 ~d~AL~~~~~A~~ld~k 555 (638)
T KOG1126|consen 539 KDKALQLYEKAIHLDPK 555 (638)
T ss_pred hhHHHHHHHHHHhcCCC
Confidence 55555555555555554
|
|
| >COG3063 PilF Tfp pilus assembly protein PilF [Cell motility and secretion / Intracellular trafficking and secretion] | Back alignment and domain information |
|---|
Probab=99.06 E-value=1.6e-09 Score=91.93 Aligned_cols=104 Identities=15% Similarity=0.078 Sum_probs=95.6
Q ss_pred HHHHHHHHHHhHHHhhCCHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhc--CCCchHHHHHH
Q 014478 317 QETLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVV--SPDWPTALYLQ 394 (424)
Q Consensus 317 ~~~~~~~~~g~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~--~p~~~~a~~~~ 394 (424)
+....+.-.|..|.+.|+.+.|-+.|++|++++|+ +.++++|.|.-+..+|+|++|...|++|+.. .|..++.|-|+
T Consensus 67 s~~~a~~~~A~~Yq~~Ge~~~A~e~YrkAlsl~p~-~GdVLNNYG~FLC~qg~~~eA~q~F~~Al~~P~Y~~~s~t~eN~ 145 (250)
T COG3063 67 SYYLAHLVRAHYYQKLGENDLADESYRKALSLAPN-NGDVLNNYGAFLCAQGRPEEAMQQFERALADPAYGEPSDTLENL 145 (250)
T ss_pred ccHHHHHHHHHHHHHcCChhhHHHHHHHHHhcCCC-ccchhhhhhHHHHhCCChHHHHHHHHHHHhCCCCCCcchhhhhh
Confidence 34456677888899999999999999999999999 9999999999999999999999999999965 56778899999
Q ss_pred HHHHHhCCChHHHHHHHHHHHhchhhc
Q 014478 395 AACLFSLGMENDARETLKDGTNLEAKK 421 (424)
Q Consensus 395 g~~~~~~~~~~~A~~~~~~al~l~~~~ 421 (424)
|.+-+++|+++.|.++|+++|++||++
T Consensus 146 G~Cal~~gq~~~A~~~l~raL~~dp~~ 172 (250)
T COG3063 146 GLCALKAGQFDQAEEYLKRALELDPQF 172 (250)
T ss_pred HHHHhhcCCchhHHHHHHHHHHhCcCC
Confidence 999999999999999999999999975
|
|
| >KOG2137 consensus Protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.05 E-value=6.2e-11 Score=115.55 Aligned_cols=152 Identities=22% Similarity=0.322 Sum_probs=111.0
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCCCcc-------------ccCccCCCc
Q 014478 87 AMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSY-------------STNLAFTPP 153 (424)
Q Consensus 87 ~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~~~~-------------~gt~~y~aP 153 (424)
+..+.=+.+++.||.|+|...++||++|.|++|.++.++.+||+.|+++......... .-...|.||
T Consensus 99 e~~f~nl~~v~dgl~flh~sAk~VH~ni~p~~i~~na~~~wkl~Gf~f~v~~~~~~~~p~~~yd~~lp~~~~~~~~f~ap 178 (700)
T KOG2137|consen 99 EDGFANLGNVADGLAFLHRSAKVVHGNIQPEAIVVNANGDWKLAGFSFCVNANGPTEYPFSEYDPPLPLLLQPHLNFLAP 178 (700)
T ss_pred cHhhhhhhcccchhhhhccCcceeecccchhheeeccCcceeeccchhhhccCCCCccccccCCCCCChhhccCcccccc
Confidence 3444455677799999999877999999999999999999999999987765542211 124679999
Q ss_pred cccccCCCCCCcceehhHHHHHHHh-hCCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHHHHHHHHHhcccCcCCC
Q 014478 154 EYMRTGRVTPESVVYSFGTMLLDLL-SGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARER 232 (424)
Q Consensus 154 E~~~~~~~~~~~Dv~slG~~l~el~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~R 232 (424)
|++.+...+.++|+||+|+++|.+. .|+..+..... ..................+..+|+++++=+.+++..++..|
T Consensus 179 E~~~~~~~~~~sd~fSlG~li~~i~~~gk~i~~a~~~--~~~~~~~~~~~~~~~~~~s~~~p~el~~~l~k~l~~~~~~r 256 (700)
T KOG2137|consen 179 EYLLGTTNTPASDVFSLGVLIYTIYNGGKSIIAANGG--LLSYSFSRNLLNAGAFGYSNNLPSELRESLKKLLNGDSAVR 256 (700)
T ss_pred hhhccccccccccceeeeeEEEEEecCCcchhhccCC--cchhhhhhcccccccccccccCcHHHHHHHHHHhcCCcccC
Confidence 9999878899999999999999998 45433222100 11111222222233334557788999999999999999999
Q ss_pred CCHHHHHH
Q 014478 233 PNAKSLVI 240 (424)
Q Consensus 233 ps~~~~~~ 240 (424)
|++..+..
T Consensus 257 p~~~~l~~ 264 (700)
T KOG2137|consen 257 PTLDLLLS 264 (700)
T ss_pred cchhhhhc
Confidence 97766543
|
|
| >PRK15179 Vi polysaccharide biosynthesis protein TviE; Provisional | Back alignment and domain information |
|---|
Probab=99.05 E-value=1.8e-09 Score=109.77 Aligned_cols=103 Identities=14% Similarity=0.044 Sum_probs=97.7
Q ss_pred HHHHHHHHHHhHHHhhCCHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhcCCCchHHHHHHHH
Q 014478 317 QETLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAA 396 (424)
Q Consensus 317 ~~~~~~~~~g~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~ 396 (424)
.........|..+.+.+++++|+..+++++..+|+ +..+++++|.++.++|++++|++.|++++..+|++++++..+|.
T Consensus 118 d~~~a~~~~a~~L~~~~~~eeA~~~~~~~l~~~p~-~~~~~~~~a~~l~~~g~~~~A~~~y~~~~~~~p~~~~~~~~~a~ 196 (694)
T PRK15179 118 DSSEAFILMLRGVKRQQGIEAGRAEIELYFSGGSS-SAREILLEAKSWDEIGQSEQADACFERLSRQHPEFENGYVGWAQ 196 (694)
T ss_pred CcHHHHHHHHHHHHHhccHHHHHHHHHHHhhcCCC-CHHHHHHHHHHHHHhcchHHHHHHHHHHHhcCCCcHHHHHHHHH
Confidence 34567778999999999999999999999999999 99999999999999999999999999999999999999999999
Q ss_pred HHHhCCChHHHHHHHHHHHhchhh
Q 014478 397 CLFSLGMENDARETLKDGTNLEAK 420 (424)
Q Consensus 397 ~~~~~~~~~~A~~~~~~al~l~~~ 420 (424)
++..+|+.++|..+|++|++....
T Consensus 197 ~l~~~G~~~~A~~~~~~a~~~~~~ 220 (694)
T PRK15179 197 SLTRRGALWRARDVLQAGLDAIGD 220 (694)
T ss_pred HHHHcCCHHHHHHHHHHHHHhhCc
Confidence 999999999999999999987654
|
|
| >PRK10803 tol-pal system protein YbgF; Provisional | Back alignment and domain information |
|---|
Probab=99.05 E-value=2.7e-09 Score=96.10 Aligned_cols=101 Identities=10% Similarity=-0.025 Sum_probs=90.6
Q ss_pred HHHHHHHhHH-HhhCCHHHHHHHHHHHhcCCCCCC---HHHHHHHHHHHHhcCChHHHHHHHHHHHhcCCC---chHHHH
Q 014478 320 LNSKKHGDTA-FRAKDFSTAIDCYTQFIDGGTMVS---PTVYARRCLSYLMNDMPQEALGDAMQAQVVSPD---WPTALY 392 (424)
Q Consensus 320 ~~~~~~g~~~-~~~g~~~~A~~~~~~ai~~~p~~~---~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~---~~~a~~ 392 (424)
...+..|..+ ++.|+|++|+..|++.++..|+ . +.+++.+|.+|+..|++++|+..|+++++.+|+ .+++++
T Consensus 143 ~~~Y~~A~~l~~~~~~y~~Ai~af~~fl~~yP~-s~~a~~A~y~LG~~y~~~g~~~~A~~~f~~vv~~yP~s~~~~dAl~ 221 (263)
T PRK10803 143 NTDYNAAIALVQDKSRQDDAIVAFQNFVKKYPD-STYQPNANYWLGQLNYNKGKKDDAAYYFASVVKNYPKSPKAADAMF 221 (263)
T ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHHHCcC-CcchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCCCCcchhHHHH
Confidence 3445566665 5679999999999999999998 5 579999999999999999999999999999887 578999
Q ss_pred HHHHHHHhCCChHHHHHHHHHHHhchhhc
Q 014478 393 LQAACLFSLGMENDARETLKDGTNLEAKK 421 (424)
Q Consensus 393 ~~g~~~~~~~~~~~A~~~~~~al~l~~~~ 421 (424)
.+|.++..+|++++|+..|+++++..|+.
T Consensus 222 klg~~~~~~g~~~~A~~~~~~vi~~yP~s 250 (263)
T PRK10803 222 KVGVIMQDKGDTAKAKAVYQQVIKKYPGT 250 (263)
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHHCcCC
Confidence 99999999999999999999999998874
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 424 | ||||
| 3tl8_A | 349 | The Avrptob-Bak1 Complex Reveals Two Structurally S | 4e-17 | ||
| 3uim_A | 326 | Structural Basis For The Impact Of Phosphorylation | 5e-17 | ||
| 3hgk_A | 327 | Crystal Structure Of Effect Protein Avrptob Complex | 7e-17 | ||
| 2qkw_B | 321 | Structural Basis For Activation Of Plant Immunity B | 2e-16 | ||
| 2oib_A | 301 | Crystal Structure Of Irak4 Kinase Domain Apo Form L | 9e-15 | ||
| 2nry_A | 307 | Crystal Structure Of Irak-4 Length = 307 | 9e-15 | ||
| 2nru_A | 307 | Crystal Structure Of Irak-4 Length = 307 | 9e-15 | ||
| 2o8y_A | 298 | Apo Irak4 Kinase Domain Length = 298 | 6e-13 | ||
| 3k54_A | 283 | Structures Of Human Bruton's Tyrosine Kinase In Act | 1e-11 | ||
| 3ocs_A | 271 | Crystal Structure Of Bruton's Tyrosine Kinase In Co | 2e-11 | ||
| 3p08_A | 267 | Crystal Structure Of The Human Btk Kinase Domain Le | 2e-11 | ||
| 3pix_A | 274 | Crystal Structure Of Btk Kinase Domain Complexed Wi | 2e-11 | ||
| 3gen_A | 283 | The 1.6 A Crystal Structure Of Human Bruton's Tyros | 2e-11 | ||
| 1k2p_A | 263 | Crystal Structure Of Bruton's Tyrosine Kinase Domai | 2e-11 | ||
| 3oct_A | 265 | Crystal Structure Of Bruton's Tyrosine Kinase Mutan | 2e-11 | ||
| 1byg_A | 278 | Kinase Domain Of Human C-Terminal Src Kinase (Csk) | 1e-08 | ||
| 3d7u_A | 263 | Structural Basis For The Recognition Of C-Src By It | 1e-08 | ||
| 1k9a_A | 450 | Crystal Structure Analysis Of Full-Length Carboxyl- | 2e-08 | ||
| 2g15_A | 318 | Structural Characterization Of Autoinhibited C-Met | 2e-08 | ||
| 3q6u_A | 308 | Structure Of The Apo Met Receptor Kinase In The Dua | 2e-08 | ||
| 2wd1_A | 292 | Human C-Met Kinase In Complex With Azaindole Inhibi | 2e-08 | ||
| 3d7t_A | 269 | Structural Basis For The Recognition Of C-Src By It | 2e-08 | ||
| 3lq8_A | 302 | Structure Of The Kinase Domain Of C-Met Bound To Xl | 2e-08 | ||
| 3i5n_A | 309 | Crystal Structure Of C-Met With Triazolopyridazine | 2e-08 | ||
| 2rfn_A | 310 | X-ray Structure Of C-met With Inhibitor. Length = 3 | 2e-08 | ||
| 2wgj_A | 306 | X-Ray Structure Of Pf-02341066 Bound To The Kinase | 3e-08 | ||
| 3f66_A | 298 | Human C-Met Kinase In Complex With Quinoxaline Inhi | 3e-08 | ||
| 4gg5_A | 319 | Crystal Structure Of Cmet In Complex With Novel Inh | 3e-08 | ||
| 3nyx_A | 302 | Non-Phosphorylated Tyk2 Jh1 Domain With Quinoline-T | 2e-07 | ||
| 3nz0_A | 302 | Non-Phosphorylated Tyk2 Kinase With Cmp6 Length = 3 | 4e-07 | ||
| 4fk3_A | 292 | B-Raf Kinase V600e Oncogenic Mutant In Complex With | 5e-07 | ||
| 3og7_A | 289 | B-Raf Kinase V600e Oncogenic Mutant In Complex With | 6e-07 | ||
| 3c4c_A | 280 | B-Raf Kinase In Complex With Plx4720 Length = 280 | 6e-07 | ||
| 4dbn_A | 284 | Crystal Structure Of The Kinase Domain Of Human B-R | 7e-07 | ||
| 3pls_A | 298 | Ron In Complex With Ligand Amp-Pnp Length = 298 | 7e-07 | ||
| 3q96_A | 282 | B-Raf Kinase Domain In Complex With A Tetrahydronap | 7e-07 | ||
| 4h58_A | 275 | Braf In Complex With Compound 3 Length = 275 | 8e-07 | ||
| 1uwj_A | 276 | The Complex Of Mutant V599e B-raf And Bay439006 Len | 8e-07 | ||
| 2fb8_A | 281 | Structure Of The B-Raf Kinase Domain Bound To Sb-59 | 8e-07 | ||
| 3idp_A | 300 | B-Raf V600e Kinase Domain In Complex With An Aminoi | 8e-07 | ||
| 4g9r_A | 307 | B-Raf V600e Kinase Domain Bound To A Type Ii Dihydr | 8e-07 | ||
| 3d4q_A | 307 | Pyrazole-Based Inhibitors Of B-Raf Kinase Length = | 8e-07 | ||
| 3lxn_A | 318 | Structural And Thermodynamic Characterization Of Th | 9e-07 | ||
| 3ii5_A | 306 | The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimi | 9e-07 | ||
| 2hiw_A | 287 | Crystal Structure Of Inactive Conformation Abl Kina | 1e-06 | ||
| 2g1t_A | 287 | A Src-Like Inactive Conformation In The Abl Tyrosin | 1e-06 | ||
| 3miy_A | 266 | X-Ray Crystal Structure Of Itk Complexed With Sunit | 1e-06 | ||
| 3qri_A | 277 | The Crystal Structure Of Human Abl1 Kinase Domain I | 1e-06 | ||
| 2hzi_A | 277 | Abl Kinase Domain In Complex With Pd180970 Length = | 1e-06 | ||
| 2e2b_A | 293 | Crystal Structure Of The C-Abl Kinase Domain In Com | 1e-06 | ||
| 3oxz_A | 284 | Crystal Structure Of Abl Kinase Domain Bound With A | 1e-06 | ||
| 1uwh_A | 276 | The Complex Of Wild Type B-Raf And Bay439006 Length | 1e-06 | ||
| 3t9t_A | 267 | Crystal Structure Of Btk Mutant (F435t,K596r) Compl | 1e-06 | ||
| 3pyy_A | 298 | Discovery And Characterization Of A Cell-Permeable, | 1e-06 | ||
| 2hz0_A | 270 | Abl Kinase Domain In Complex With Nvp-Aeg082 Length | 1e-06 | ||
| 2hyy_A | 273 | Human Abl Kinase Domain In Complex With Imatinib (S | 1e-06 | ||
| 1fpu_A | 293 | Crystal Structure Of Abl Kinase Domain In Complex W | 1e-06 | ||
| 2qoh_A | 288 | Crystal Structure Of Abl Kinase Bound With Ppy-a Le | 1e-06 | ||
| 3qrj_A | 277 | The Crystal Structure Of Human Abl1 Kinase Domain T | 1e-06 | ||
| 2z60_A | 288 | Crystal Structure Of The T315i Mutant Of Abl Kinase | 2e-06 | ||
| 1qpd_A | 279 | Structural Analysis Of The Lymphocyte-specific Kina | 2e-06 | ||
| 4f0f_A | 287 | Crystal Structure Of The Roco4 Kinase Domain Bound | 2e-06 | ||
| 3oy3_A | 284 | Crystal Structure Of Abl T315i Mutant Kinase Domain | 2e-06 | ||
| 1sm2_A | 264 | Crystal Structure Of The Phosphorylated Interleukin | 2e-06 | ||
| 3qgw_A | 286 | Crystal Structure Of Itk Kinase Bound To An Inhibit | 2e-06 | ||
| 3v5j_A | 266 | Crystal Structure Of Interleukin-2 Inducible T-Cell | 2e-06 | ||
| 2dq7_X | 283 | Crystal Structure Of Fyn Kinase Domain Complexed Wi | 2e-06 | ||
| 2f4j_A | 287 | Structure Of The Kinase Domain Of An Imatinib-Resis | 2e-06 | ||
| 4asz_A | 299 | Crystal Structure Of Apo Trkb Kinase Domain Length | 2e-06 | ||
| 4hct_A | 269 | Crystal Structure Of Itk In Complex With Compound 5 | 2e-06 | ||
| 2og8_A | 265 | Crystal Structure Of Aminoquinazoline 36 Bound To L | 2e-06 | ||
| 2g2f_A | 287 | A Src-Like Inactive Conformation In The Abl Tyrosin | 2e-06 | ||
| 3q52_A | 306 | Structure Of Phosphorylated Pak1 Kinase Domain Leng | 2e-06 | ||
| 3kxz_A | 287 | The Complex Crystal Structure Of Lck With A Probe M | 2e-06 | ||
| 3cd3_A | 377 | Crystal Structure Of Phosphorylated Human Feline Sa | 2e-06 | ||
| 3kmm_A | 288 | Structure Of Human Lck Kinase With A Small Molecule | 2e-06 | ||
| 2pl0_A | 289 | Lck Bound To Imatinib Length = 289 | 3e-06 | ||
| 3bys_A | 277 | Co-Crystal Structure Of Lck And Aminopyrimidine Ami | 3e-06 | ||
| 2zm1_A | 285 | Crystal Structure Of Imidazo Pyrazin 1 Bound To The | 3e-06 | ||
| 1ksw_A | 452 | Structure Of Human C-Src Tyrosine Kinase (Thr338gly | 3e-06 | ||
| 1qpe_A | 279 | Structural Analysis Of The Lymphocyte-Specific Kina | 3e-06 | ||
| 2ofv_A | 277 | Crystal Structure Of Aminoquinazoline 1 Bound To Lc | 3e-06 | ||
| 3bym_A | 272 | X-Ray Co-Crystal Structure Aminobenzimidazole Triaz | 3e-06 | ||
| 3lck_A | 271 | The Kinase Domain Of Human Lymphocyte Kinase (Lck), | 3e-06 | ||
| 3ugc_A | 295 | Structural Basis Of Jak2 Inhibition By The Type Ii | 3e-06 | ||
| 2ofu_A | 273 | X-Ray Crystal Structure Of 2-Aminopyrimidine Carbam | 3e-06 | ||
| 1fmk_A | 452 | Crystal Structure Of Human Tyrosine-Protein Kinase | 3e-06 | ||
| 1y57_A | 452 | Structure Of Unphosphorylated C-Src In Complex With | 3e-06 | ||
| 2of2_A | 271 | Crystal Structure Of Furanopyrimidine 8 Bound To Lc | 3e-06 | ||
| 3bkb_A | 377 | Crystal Structure Of Human Feline Sarcoma Viral Onc | 3e-06 | ||
| 2h8h_A | 535 | Src Kinase In Complex With A Quinazoline Inhibitor | 3e-06 | ||
| 3gvu_A | 292 | The Crystal Structure Of Human Abl2 In Complex With | 4e-06 | ||
| 4e6d_A | 298 | Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex W | 4e-06 | ||
| 1yi6_A | 276 | C-Term Tail Segment Of Human Tyrosine Kinase (258-5 | 4e-06 | ||
| 2bdf_A | 279 | Src Kinase In Complex With Inhibitor Ap23451 Length | 4e-06 | ||
| 2zv7_A | 279 | Lyn Tyrosine Kinase Domain, Apo Form Length = 279 | 5e-06 | ||
| 4bbe_A | 298 | Aminoalkylpyrimidine Inhibitor Complexes With Jak2 | 5e-06 | ||
| 2gqg_A | 278 | X-Ray Crystal Structure Of Dasatinib (Bms-354825) B | 5e-06 | ||
| 2oiq_A | 286 | Crystal Structure Of Chicken C-Src Kinase Domain In | 5e-06 | ||
| 3fxz_A | 297 | Crystal Structure Of Pak1 Kinase Domain With Ruthen | 6e-06 | ||
| 3svv_A | 286 | Crystal Structure Of T338c C-Src Covalently Bound T | 6e-06 | ||
| 4fvr_A | 289 | Crystal Structure Of The Jak2 Pseudokinase Domain M | 6e-06 | ||
| 3d7u_B | 277 | Structural Basis For The Recognition Of C-Src By It | 6e-06 | ||
| 2fo0_A | 495 | Organization Of The Sh3-Sh2 Unit In Active And Inac | 6e-06 | ||
| 3dk3_A | 293 | Crystal Structure Of Mutant Abl Kinase Domain In Co | 6e-06 | ||
| 3kxx_A | 317 | Structure Of The Mutant Fibroblast Growth Factor Re | 6e-06 | ||
| 3dqw_A | 286 | C-Src Kinase Domain Thr338ile Mutant In Complex Wit | 6e-06 | ||
| 3q4z_A | 306 | Structure Of Unphosphorylated Pak1 Kinase Domain Le | 6e-06 | ||
| 4f1o_A | 287 | Crystal Structure Of The L1180t Mutant Roco4 Kinase | 7e-06 | ||
| 3u4w_A | 275 | Src In Complex With Dna-Templated Macrocyclic Inhib | 7e-06 | ||
| 2ptk_A | 453 | Chicken Src Tyrosine Kinase Length = 453 | 7e-06 | ||
| 3g6h_A | 286 | Src Thr338ile Inhibited In The Dfg-Asp-Out Conforma | 7e-06 | ||
| 1opk_A | 495 | Structural Basis For The Auto-Inhibition Of C-Abl T | 7e-06 | ||
| 2v7a_A | 286 | Crystal Structure Of The T315i Abl Mutant In Comple | 7e-06 | ||
| 3geq_A | 286 | Structural Basis For The Chemical Rescue Of Src Kin | 7e-06 | ||
| 3mpm_A | 267 | Lck Complexed With A Pyrazolopyrimidine Length = 26 | 8e-06 | ||
| 1opl_A | 537 | Structural Basis For The Auto-Inhibition Of C-Abl T | 8e-06 | ||
| 3s95_A | 310 | Crystal Structure Of The Human Limk1 Kinase Domain | 8e-06 | ||
| 2jed_A | 352 | The Crystal Structure Of The Kinase Domain Of The P | 8e-06 | ||
| 3oez_A | 286 | Crystal Structure Of The L317i Mutant Of The Chicke | 8e-06 | ||
| 1f3m_C | 297 | Crystal Structure Of Human SerineTHREONINE KINASE P | 9e-06 | ||
| 4e1z_A | 291 | Structure Of Mouse Tyk-2 Complexed To A 3-Aminoinda | 9e-06 | ||
| 1yhv_A | 297 | Crystal Structure Of Pak1 Kinase Domain With Two Po | 9e-06 | ||
| 4e20_A | 290 | Structure Of Mouse Tyk-2 Complexed To A 3-Aminoinda | 9e-06 | ||
| 2w1i_A | 326 | Structure Determination Of Aurora Kinase In Complex | 9e-06 | ||
| 4f1m_A | 287 | Crystal Structure Of The G1179s Roco4 Kinase Domain | 1e-05 | ||
| 2xa4_A | 298 | Inhibitors Of Jak2 Kinase Domain Length = 298 | 1e-05 | ||
| 2hwo_A | 286 | Crystal Structure Of Src Kinase Domain In Complex W | 1e-05 | ||
| 1xjd_A | 345 | Crystal Structure Of Pkc-Theta Complexed With Staur | 1e-05 | ||
| 3orn_A | 307 | Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In | 1e-05 | ||
| 3dk6_A | 293 | Crystal Structure Of Mutant Abl Kinase Domain In Co | 1e-05 | ||
| 2b7a_A | 293 | The Structural Basis Of Janus Kinase 2 Inhibition B | 1e-05 | ||
| 4aqc_A | 301 | Triazolopyridine-Based Inhibitor Of Janus Kinase 2 | 1e-05 | ||
| 4e4m_A | 302 | Jak2 Kinase (Jh1 Domain) In Complex With Compound 3 | 1e-05 | ||
| 4hge_A | 300 | Jak2 Kinase (Jh1 Domain) In Complex With Compound 8 | 1e-05 | ||
| 3tjc_A | 298 | Co-Crystal Structure Of Jak2 With Thienopyridine 8 | 1e-05 | ||
| 3io7_A | 313 | 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Sel | 1e-05 | ||
| 1yoj_A | 283 | Crystal Structure Of Src Kinase Domain Length = 283 | 1e-05 | ||
| 3ubd_A | 304 | Structure Of N-Terminal Domain Of Rsk2 Kinase In Co | 1e-05 | ||
| 3a4o_X | 286 | Lyn Kinase Domain Length = 286 | 1e-05 | ||
| 4el9_A | 305 | Structure Of N-Terminal Kinase Domain Of Rsk2 With | 1e-05 | ||
| 3q32_A | 301 | Structure Of Janus Kinase 2 With A Pyrrolotriazine | 1e-05 | ||
| 1yol_A | 283 | Crystal Structure Of Src Kinase Domain In Complex W | 1e-05 | ||
| 3lpb_A | 295 | Crystal Structure Of Jak2 Complexed With A Potent 2 | 1e-05 | ||
| 3jy9_A | 311 | Janus Kinase 2 Inhibitors Length = 311 | 1e-05 | ||
| 2qq7_A | 286 | Crystal Structure Of Drug Resistant Src Kinase Doma | 1e-05 | ||
| 3rvg_A | 303 | Crystals Structure Of Jak2 With A 1-Amino-5h-Pyrido | 1e-05 | ||
| 3e62_A | 293 | Fragment Based Discovery Of Jak-2 Inhibitors Length | 1e-05 | ||
| 3g51_A | 325 | Structural Diversity Of The Active Conformation Of | 1e-05 | ||
| 3dk7_A | 277 | Crystal Structure Of Mutant Abl Kinase Domain In Co | 1e-05 | ||
| 3txo_A | 353 | Pkc Eta Kinase In Complex With A Naphthyridine Leng | 2e-05 | ||
| 3gqi_A | 326 | Crystal Structure Of Activated Receptor Tyrosine Ki | 2e-05 | ||
| 2x4z_A | 296 | Crystal Structure Of The Human P21-Activated Kinase | 2e-05 | ||
| 2bva_A | 292 | Crystal Structure Of The Human P21-Activated Kinase | 2e-05 | ||
| 2q0n_A | 301 | Structure Of Human P21 Activating Kinase 4 (Pak4) I | 2e-05 | ||
| 2cdz_A | 303 | Crystal Structure Of The Human P21-Activated Kinase | 2e-05 | ||
| 4fvp_A | 289 | Crystal Structure Of The Jak2 Pseudokinase Domain ( | 2e-05 | ||
| 3v5q_A | 297 | Discovery Of A Selective Trk Inhibitor With Efficac | 2e-05 | ||
| 2yjr_A | 342 | Structure Of F1174l Mutant Anaplastic Lymphoma Kina | 3e-05 | ||
| 3tt0_A | 382 | Co-Structure Of Fibroblast Growth Factor Receptor 1 | 3e-05 | ||
| 3zgw_A | 347 | Crystal Structure Of Maternal Embryonic Leucine Zip | 3e-05 | ||
| 4f63_A | 309 | Crystal Structure Of Human Fibroblast Growth Factor | 3e-05 | ||
| 3c4f_A | 302 | Fgfr Tyrosine Kinase Domain In Complex With 3-(3- M | 3e-05 | ||
| 3rhx_B | 306 | Crystal Structure Of The Catalytic Domain Of Fgfr1 | 3e-05 | ||
| 3js2_A | 317 | Crystal Structure Of Minimal Kinase Domain Of Fibro | 3e-05 | ||
| 4fif_A | 346 | Catalytic Domain Of Human Pak4 With Rpkplvdp Peptid | 3e-05 | ||
| 2xik_A | 294 | Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related K | 3e-05 | ||
| 4fnw_A | 327 | Crystal Structure Of The Apo F1174l Anaplastic Lymp | 3e-05 | ||
| 1fgk_A | 310 | Crystal Structure Of The Tyrosine Kinase Domain Of | 3e-05 | ||
| 3gql_A | 326 | Crystal Structure Of Activated Receptor Tyrosine Ki | 3e-05 | ||
| 2pzr_A | 324 | Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D | 4e-05 | ||
| 4fie_A | 423 | Full-Length Human Pak4 Length = 423 | 4e-05 | ||
| 3nyn_A | 576 | Crystal Structure Of G Protein-Coupled Receptor Kin | 4e-05 | ||
| 3cly_A | 334 | Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase | 4e-05 | ||
| 2yfx_A | 327 | Structure Of L1196m Mutant Anaplastic Lymphoma Kina | 4e-05 | ||
| 2qon_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Y596f: | 5e-05 | ||
| 2acx_A | 576 | Crystal Structure Of G Protein Coupled Receptor Kin | 5e-05 | ||
| 3dzq_A | 361 | Human Epha3 Kinase Domain In Complex With Inhibitor | 5e-05 | ||
| 2qok_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Y596f: | 5e-05 | ||
| 2yhv_A | 342 | Structure Of L1196m Mutant Anaplastic Lymphoma Kina | 5e-05 | ||
| 2xp2_A | 327 | Structure Of The Human Anaplastic Lymphoma Kinase I | 5e-05 | ||
| 2qoc_A | 344 | Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp | 5e-05 | ||
| 2xb7_A | 315 | Structure Of Human Anaplastic Lymphoma Kinase In Co | 5e-05 | ||
| 3b2t_A | 311 | Structure Of Phosphotransferase Length = 311 | 6e-05 | ||
| 3sxr_A | 268 | Crystal Structure Of Bmx Non-Receptor Tyrosine Kina | 6e-05 | ||
| 3aox_A | 344 | X-Ray Crystal Structure Of Human Anaplastic Lymphom | 6e-05 | ||
| 3fxx_A | 371 | Human Epha3 Kinase And Juxtamembrane Region Bound T | 6e-05 | ||
| 3lct_A | 344 | Crystal Structure Of The Anaplastic Lymphoma Kinase | 6e-05 | ||
| 2gsf_A | 373 | The Human Epha3 Receptor Tyrosine Kinase And Juxtam | 6e-05 | ||
| 3l9p_A | 367 | Crystal Structure Of The Anaplastic Lymphoma Kinase | 6e-05 | ||
| 2qof_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Y596f | 6e-05 | ||
| 2qod_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Y602f | 6e-05 | ||
| 2qoi_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Y596f: | 7e-05 | ||
| 2hk5_A | 270 | Hck Kinase In Complex With Lck Targetted Inhibitor | 7e-05 | ||
| 4fnz_A | 327 | Crystal Structure Of Human Anaplastic Lymphoma Kina | 7e-05 | ||
| 4dce_A | 333 | Crystal Structure Of Human Anaplastic Lymphoma Kina | 7e-05 | ||
| 2qoo_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Y596f: | 7e-05 | ||
| 2yjs_A | 342 | Structure Of C1156y Mutant Anaplastic Lymphoma Kina | 7e-05 | ||
| 2qol_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Y596:y | 8e-05 | ||
| 2pvy_A | 324 | Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D | 9e-05 | ||
| 1gjo_A | 316 | The Fgfr2 Tyrosine Kinase Domain Length = 316 | 9e-05 | ||
| 1qcf_A | 454 | Crystal Structure Of Hck In Complex With A Src Fami | 9e-05 | ||
| 2pzp_A | 324 | Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D | 9e-05 | ||
| 4fob_A | 353 | Crystal Structure Of Human Anaplastic Lymphoma Kina | 9e-05 | ||
| 3aln_A | 327 | Crystal Structure Of Human Non-Phosphorylated Mkk4 | 1e-04 | ||
| 3ri1_A | 313 | Crystal Structure Of The Catalytic Domain Of Fgfr2 | 1e-04 | ||
| 3dak_A | 290 | Crystal Structure Of Domain-Swapped Osr1 Kinase Dom | 1e-04 | ||
| 2psq_A | 370 | Crystal Structure Of Unphosphorylated Unactivated W | 1e-04 | ||
| 2vwi_A | 303 | Structure Of The Osr1 Kinase, A Hypertension Drug T | 1e-04 | ||
| 1ad5_A | 438 | Src Family Kinase Hck-Amp-Pnp Complex Length = 438 | 1e-04 | ||
| 4an2_A | 301 | Crystal Structures Of Human Mek1 With Carboxamide-B | 1e-04 | ||
| 2pvf_A | 334 | Crystal Structure Of Tyrosine Phosphorylated Activa | 1e-04 | ||
| 4fnx_A | 327 | Crystal Structure Of The Apo R1275q Anaplastic Lymp | 2e-04 | ||
| 2qob_A | 344 | Human Epha3 Kinase Domain, Base Structure Length = | 2e-04 | ||
| 2qo7_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Dephos | 2e-04 | ||
| 2iwi_A | 312 | Crystal Structure Of The Human Pim2 In Complex With | 2e-04 | ||
| 1fot_A | 318 | Structure Of The Unliganded Camp-Dependent Protein | 3e-04 | ||
| 2z8c_A | 303 | Phosphorylated Insulin Receptor Tyrosine Kinase In | 3e-04 | ||
| 1ir3_A | 306 | Phosphorylated Insulin Receptor Tyrosine Kinase In | 3e-04 | ||
| 2f57_A | 317 | Crystal Structure Of The Human P21-activated Kinase | 3e-04 | ||
| 3ppz_A | 309 | Crystal Structure Of Ctr1 Kinase Domain In Complex | 4e-04 | ||
| 1irk_A | 306 | Crystal Structure Of The Tyrosine Kinase Domain Of | 4e-04 | ||
| 1i44_A | 306 | Crystallographic Studies Of An Activation Loop Muta | 4e-04 | ||
| 2rei_A | 318 | Kinase Domain Of Human Ephrin Type-a Receptor 7 (ep | 4e-04 | ||
| 3eta_A | 317 | Kinase Domain Of Insulin Receptor Complexed With A | 4e-04 | ||
| 3mn3_A | 271 | An Inhibited Conformation For The Protein Kinase Do | 5e-04 | ||
| 2fh9_A | 274 | Structure And Dimerization Of The Kinase Domain Fro | 5e-04 | ||
| 3dae_A | 283 | Crystal Structure Of Phosphorylated Snf1 Kinase Dom | 5e-04 | ||
| 3hyh_A | 275 | Crystal Structure Of The Protein Kinase Domain Of Y | 5e-04 | ||
| 2f2u_A | 402 | Crystal Structure Of The Rho-Kinase Kinase Domain L | 5e-04 | ||
| 4ejn_A | 446 | Crystal Structure Of Autoinhibited Form Of Akt1 In | 5e-04 | ||
| 3o96_A | 446 | Crystal Structure Of Human Akt1 With An Allosteric | 5e-04 | ||
| 3sls_A | 304 | Crystal Structure Of Human Mek-1 Kinase In Complex | 5e-04 | ||
| 2qnj_A | 328 | Kinase And Ubiquitin-Associated Domains Of Mark3PAR | 6e-04 | ||
| 1rqq_A | 306 | Crystal Structure Of The Insulin Receptor Kinase In | 6e-04 | ||
| 1a17_A | 166 | Tetratricopeptide Repeats Of Protein Phosphatase 5 | 6e-04 | ||
| 2z7q_A | 321 | Crystal Structure Of The N-Terminal Kinase Domain O | 7e-04 | ||
| 1wao_1 | 477 | Pp5 Structure Length = 477 | 9e-04 |
| >pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar Kinaseinteracting Domains In A Single Type Iii Effector Length = 349 | Back alignment and structure |
|
| >pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On Plant Receptor- Like Kinase Bak1 Activation Length = 326 | Back alignment and structure |
|
| >pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With Kinase Pto Length = 327 | Back alignment and structure |
|
| >pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By Bacterial Effector Protein Avrpto Length = 321 | Back alignment and structure |
|
| >pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form Length = 301 | Back alignment and structure |
|
| >pdb|2NRY|A Chain A, Crystal Structure Of Irak-4 Length = 307 | Back alignment and structure |
|
| >pdb|2NRU|A Chain A, Crystal Structure Of Irak-4 Length = 307 | Back alignment and structure |
|
| >pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain Length = 298 | Back alignment and structure |
|
| >pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And Inactive Conformations Suggests A Mechanism Of Activation For Tec Family Kinases Length = 283 | Back alignment and structure |
|
| >pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex With Inhibitor Cgi1746 Length = 271 | Back alignment and structure |
|
| >pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain Length = 267 | Back alignment and structure |
|
| >pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With 2-Isopropyl-7- (4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3- Ylamino)-2h- Phthalazin-1-One Length = 274 | Back alignment and structure |
|
| >pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine Kinase Bound To A Pyrrolopyrimidine-Containing Compound Length = 283 | Back alignment and structure |
|
| >pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain Length = 263 | Back alignment and structure |
|
| >pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r In Complex With Dasatinib Length = 265 | Back alignment and structure |
|
| >pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In Complex With Inhibitor Staurosporine Length = 278 | Back alignment and structure |
|
| >pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 263 | Back alignment and structure |
|
| >pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length Carboxyl-Terminal Src Kinase At 2.5 A Resolution Length = 450 | Back alignment and structure |
|
| >pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase Length = 318 | Back alignment and structure |
|
| >pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The Dually-Phosphorylated, Activated State Length = 308 | Back alignment and structure |
|
| >pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor Length = 292 | Back alignment and structure |
|
| >pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 269 | Back alignment and structure |
|
| >pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880 (Gsk1 Length = 302 | Back alignment and structure |
|
| >pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine Inhibitor 13 Length = 309 | Back alignment and structure |
|
| >pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor. Length = 310 | Back alignment and structure |
|
| >pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain Of C-Met Length = 306 | Back alignment and structure |
|
| >pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor Length = 298 | Back alignment and structure |
|
| >pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor Length = 319 | Back alignment and structure |
|
| >pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With Quinoline-Thiadiazole- Thiophene Inhibitor Length = 302 | Back alignment and structure |
|
| >pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6 Length = 302 | Back alignment and structure |
|
| >pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With Plx3203 Length = 292 | Back alignment and structure |
|
| >pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With Plx4032 Length = 289 | Back alignment and structure |
|
| >pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720 Length = 280 | Back alignment and structure |
|
| >pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With A [1, 3]thiazolo[5,4-B]pyridine Derivative Length = 284 | Back alignment and structure |
|
| >pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp Length = 298 | Back alignment and structure |
|
| >pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A Tetrahydronaphthalene Inhibitor Length = 282 | Back alignment and structure |
|
| >pdb|4H58|A Chain A, Braf In Complex With Compound 3 Length = 275 | Back alignment and structure |
|
| >pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006 Length = 276 | Back alignment and structure |
|
| >pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885 Length = 281 | Back alignment and structure |
|
| >pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An Aminoisoquinoline Inhibitor Length = 300 | Back alignment and structure |
|
| >pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii Dihydroquinazoline Inhibitor Length = 307 | Back alignment and structure |
|
| >pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase Length = 307 | Back alignment and structure |
|
| >pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2 And Jak3 Kinase Domains In Complex With Cp-690550 And Cmp-6 Length = 318 | Back alignment and structure |
|
| >pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine Inhibitor Length = 306 | Back alignment and structure |
|
| >pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase Catalytic Domain Complexed With Type Ii Inhibitor Length = 287 | Back alignment and structure |
|
| >pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase Domain Length = 287 | Back alignment and structure |
|
| >pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib Length = 266 | Back alignment and structure |
|
| >pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In Complex With Dcc- 2036 Length = 277 | Back alignment and structure |
|
| >pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970 Length = 277 | Back alignment and structure |
|
| >pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex With Inno-406 Length = 293 | Back alignment and structure |
|
| >pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A Dfg-Out Inhibitor Ap24534 Length = 284 | Back alignment and structure |
|
| >pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006 Length = 276 | Back alignment and structure |
|
| >pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed With Imidazo[1,5-A]quinoxaline Length = 267 | Back alignment and structure |
|
| >pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable, Small-Molecule C- Abl Kinase Activator That Binds To The Myristoyl Binding Site Length = 298 | Back alignment and structure |
|
| >pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082 Length = 270 | Back alignment and structure |
|
| >pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571, Glivec) Length = 273 | Back alignment and structure |
|
| >pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A Small Molecule Inhibitor Length = 293 | Back alignment and structure |
|
| >pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a Length = 288 | Back alignment and structure |
|
| >pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i Mutant In Complex With Dcc-2036 Length = 277 | Back alignment and structure |
|
| >pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound With Ppy-A Length = 288 | Back alignment and structure |
|
| >pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck In Complex With Non-selective And Src Family Selective Kinase Inhibitors Length = 279 | Back alignment and structure |
|
| >pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To Appcp From D. Discoideum Length = 287 | Back alignment and structure |
|
| >pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound With A Dfg- Out Inhibitor Ap24589 Length = 284 | Back alignment and structure |
|
| >pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2 Tyrosine Kinase Catalytic Domain Length = 264 | Back alignment and structure |
|
| >pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor Length = 286 | Back alignment and structure |
|
| >pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase Itk Catalytic Domain With Thienopyrazolylindole Inhibitor 090 Length = 266 | Back alignment and structure |
|
| >pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With Staurosporine Length = 283 | Back alignment and structure |
|
| >pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant Abl Mutant In Complex With The Aurora Kinase Inhibitor Vx-680 Length = 287 | Back alignment and structure |
|
| >pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain Length = 299 | Back alignment and structure |
|
| >pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52 Length = 269 | Back alignment and structure |
|
| >pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck Length = 265 | Back alignment and structure |
|
| >pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase Domain Length = 287 | Back alignment and structure |
|
| >pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain Length = 306 | Back alignment and structure |
|
| >pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule W259 Length = 287 | Back alignment and structure |
|
| >pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma Viral Oncogene Homologue (V-Fes) In Complex With Staurosporine And A Consensus Peptide Length = 377 | Back alignment and structure |
|
| >pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule Inhibitor Length = 288 | Back alignment and structure |
|
| >pdb|2PL0|A Chain A, Lck Bound To Imatinib Length = 289 | Back alignment and structure |
|
| >pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b Length = 277 | Back alignment and structure |
|
| >pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase Domain Of Human Lck, (Auto-Phosphorylated On Tyr394) Length = 285 | Back alignment and structure |
|
| >pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly Mutant) In Complex With N6-Benzyl Adp Length = 452 | Back alignment and structure |
|
| >pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck In Complex With Non-Selective And Src Family Selective Kinase Inhibitors Length = 279 | Back alignment and structure |
|
| >pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck Length = 277 | Back alignment and structure |
|
| >pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1 Bound To Lck Length = 272 | Back alignment and structure |
|
| >pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck), Activated Form (Auto-Phosphorylated On Tyr394) Length = 271 | Back alignment and structure |
|
| >pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii Inhibtor Nvp-Bbt594 Length = 295 | Back alignment and structure |
|
| >pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43 Bound To Lck Length = 273 | Back alignment and structure |
|
| >pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src Length = 452 | Back alignment and structure |
|
| >pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An Inhibitor Length = 452 | Back alignment and structure |
|
| >pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck Length = 271 | Back alignment and structure |
|
| >pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene Homologue (V- Fes) Length = 377 | Back alignment and structure |
|
| >pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor Length = 535 | Back alignment and structure |
|
| >pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With Gleevec Length = 292 | Back alignment and structure |
|
| >pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With Compound 7 Length = 298 | Back alignment and structure |
|
| >pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533) Length = 276 | Back alignment and structure |
|
| >pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451 Length = 279 | Back alignment and structure |
|
| >pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form Length = 279 | Back alignment and structure |
|
| >pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2 Length = 298 | Back alignment and structure |
|
| >pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To Activated Abl Kinase Domain Length = 278 | Back alignment and structure |
|
| >pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In Complex With The Cancer Drug Imatinib. Length = 286 | Back alignment and structure |
|
| >pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium Complex Lambda-Fl172 Length = 297 | Back alignment and structure |
|
| >pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To Vinylsulfonamide- Pyrazolopyrimidine 9 Length = 286 | Back alignment and structure |
|
| >pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant V617f (Mg- Atp-Bound Form) Length = 289 | Back alignment and structure |
|
| >pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 277 | Back alignment and structure |
|
| >pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 293 | Back alignment and structure |
|
| >pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor 1 Length = 317 | Back alignment and structure |
|
| >pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs Length = 286 | Back alignment and structure |
|
| >pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain Length = 306 | Back alignment and structure |
|
| >pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain From D. Discoideum Bound To Appcp Length = 287 | Back alignment and structure |
|
| >pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor Mc4b Length = 275 | Back alignment and structure |
|
| >pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase Length = 453 | Back alignment and structure |
|
| >pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation Length = 286 | Back alignment and structure |
|
| >pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine Kinase Length = 495 | Back alignment and structure |
|
| >pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With The Inhibitor Pha-739358 Length = 286 | Back alignment and structure |
|
| >pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase Activity Length = 286 | Back alignment and structure |
|
| >pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine Length = 267 | Back alignment and structure |
|
| >pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine Kinase Length = 537 | Back alignment and structure |
|
| >pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In Complex With Staurosporine Length = 310 | Back alignment and structure |
|
| >pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a Resolution. Length = 352 | Back alignment and structure |
|
| >pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src Tyrosine Kinase Domain Complexed With Imatinib Length = 286 | Back alignment and structure |
|
| >pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1 Length = 297 | Back alignment and structure |
|
| >pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole Inhibitor Length = 291 | Back alignment and structure |
|
| >pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point Mutations (K299r, T423e) Length = 297 | Back alignment and structure |
|
| >pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole Inhibitor Length = 290 | Back alignment and structure |
|
| >pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 326 | Back alignment and structure |
|
| >pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound To Appcp From D. Discoideum Length = 287 | Back alignment and structure |
|
| >pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain Length = 298 | Back alignment and structure |
|
| >pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With Covalent Inhibitor Length = 286 | Back alignment and structure |
|
| >pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With Staurosporine At 2a Resolution Length = 345 | Back alignment and structure |
|
| >pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In Complex With Ch4987655 And Mgamp-Pnp Length = 307 | Back alignment and structure |
|
| >pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 293 | Back alignment and structure |
|
| >pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A Potent And Specific Pan-Janus Kinase Inhibitor Length = 293 | Back alignment and structure |
|
| >pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2 Length = 301 | Back alignment and structure |
|
| >pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30 Length = 302 | Back alignment and structure |
|
| >pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8 Length = 300 | Back alignment and structure |
|
| >pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8 Length = 298 | Back alignment and structure |
|
| >pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective Inhibitors Of Jak2 Length = 313 | Back alignment and structure |
|
| >pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain Length = 283 | Back alignment and structure |
|
| >pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex With Flavonoid Glycoside Sl0101 Length = 304 | Back alignment and structure |
|
| >pdb|3A4O|X Chain X, Lyn Kinase Domain Length = 286 | Back alignment and structure |
|
| >pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin Length = 305 | Back alignment and structure |
|
| >pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine Inhibitor Length = 301 | Back alignment and structure |
|
| >pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With Cgp77675 Length = 283 | Back alignment and structure |
|
| >pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent 2,8-Diaryl Quinoxaline Inhibitor Length = 295 | Back alignment and structure |
|
| >pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors Length = 311 | Back alignment and structure |
|
| >pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With Irreversible Inhibitor Length = 286 | Back alignment and structure |
|
| >pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A 1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor Length = 303 | Back alignment and structure |
|
| >pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors Length = 293 | Back alignment and structure |
|
| >pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N- Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2 Length = 325 | Back alignment and structure |
|
| >pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 277 | Back alignment and structure |
|
| >pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine Length = 353 | Back alignment and structure |
|
| >pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In Complex With Substrates Length = 326 | Back alignment and structure |
|
| >pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In Complex With Pf-03758309 Length = 296 | Back alignment and structure |
|
| >pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 Length = 292 | Back alignment and structure |
|
| >pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In Complex With A Consensus Peptide Length = 301 | Back alignment and structure |
|
| >pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In Complex With Cgp74514a Length = 303 | Back alignment and structure |
|
| >pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo Form) Length = 289 | Back alignment and structure |
|
| >pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In Rodent Cancer Tumor Models Length = 297 | Back alignment and structure |
|
| >pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase Length = 342 | Back alignment and structure |
|
| >pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase Domain With 3-(2,6-Dichloro-3, 5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1- Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398) Length = 382 | Back alignment and structure |
|
| >pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor Receptor 1 Kinase Domain In Complex With Compound 1 Length = 309 | Back alignment and structure |
|
| >pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3- Methoxybenzyl)-7-Azaindole Length = 302 | Back alignment and structure |
|
| >pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase In Complex With Arq 069 Length = 306 | Back alignment and structure |
|
| >pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast Growth Factor Receptor 1 In Complex With 5-(2-Thienyl) Nicotinic Acid Length = 317 | Back alignment and structure |
|
| >pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide Length = 346 | Back alignment and structure |
|
| >pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase 1) Length = 294 | Back alignment and structure |
|
| >pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma Kinase Catalytic Domain Length = 327 | Back alignment and structure |
|
| >pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fibroblast Growth Factor Receptor 1 Length = 310 | Back alignment and structure |
|
| >pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In Complex With Substrates Length = 326 | Back alignment and structure |
|
| >pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic K641r Mutation Responsible For Pfeiffer Syndrome Length = 324 | Back alignment and structure |
|
| >pdb|4FIE|A Chain A, Full-Length Human Pak4 Length = 423 | Back alignment and structure |
|
| >pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6 In Complex With Sangivamycin Length = 576 | Back alignment and structure |
|
| >pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains Trapped In Trans-Phosphorylation Reaction Length = 334 | Back alignment and structure |
|
| >pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In Complex With Crizotinib Length = 327 | Back alignment and structure |
|
| >pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f:y742a Triple Mutant Length = 373 | Back alignment and structure |
|
| >pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6 Bound To Amppnp Length = 576 | Back alignment and structure |
|
| >pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor Awl-Ii- 38.3 Length = 361 | Back alignment and structure |
|
| >pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f:s768a Triple Mutant Length = 373 | Back alignment and structure |
|
| >pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase Length = 342 | Back alignment and structure |
|
| >pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In Complex With Crizotinib (Pf-02341066) Length = 327 | Back alignment and structure |
|
| >pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound Structure Length = 344 | Back alignment and structure |
|
| >pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex With Nvp- Tae684 Length = 315 | Back alignment and structure |
|
| >pdb|3B2T|A Chain A, Structure Of Phosphotransferase Length = 311 | Back alignment and structure |
|
| >pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase Complex With Dasatinib Length = 268 | Back alignment and structure |
|
| >pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma Kinase In Complex With Ch5424802 Length = 344 | Back alignment and structure |
|
| >pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To Substrate Kqwdnye[ptyr]iw Length = 371 | Back alignment and structure |
|
| >pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase Catalytic Domain Length = 344 | Back alignment and structure |
|
| >pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane Region Length = 373 | Back alignment and structure |
|
| >pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase Catalytic Domain Length = 367 | Back alignment and structure |
|
| >pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant Length = 373 | Back alignment and structure |
|
| >pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant Length = 373 | Back alignment and structure |
|
| >pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f Double Mutant Length = 373 | Back alignment and structure |
|
| >pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg- 1009247 Length = 270 | Back alignment and structure |
|
| >pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In Complex With Piperidine-Carboxamide Inhibitor 2 Length = 327 | Back alignment and structure |
|
| >pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In Complex With A Piperidine-Carboxamide Inhibitor Length = 333 | Back alignment and structure |
|
| >pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f:y742f Triple Mutant Length = 373 | Back alignment and structure |
|
| >pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase Length = 342 | Back alignment and structure |
|
| >pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596:y602:s768g Triple Mutant Length = 373 | Back alignment and structure |
|
| >pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic K659n Mutation Responsible For An Unclassified Craniosynostosis Syndrome. Length = 324 | Back alignment and structure |
|
| >pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain Length = 316 | Back alignment and structure |
|
| >pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family- Selective Tyrosine Kinase Inhibitor Length = 454 | Back alignment and structure |
|
| >pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic K526e Mutation Responsible For Crouzon Syndrome Length = 324 | Back alignment and structure |
|
| >pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In Complex With Acyliminobenzimidazole Inhibitor 1 Length = 353 | Back alignment and structure |
|
| >pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase Domain Complexed With Amp-Pnp Length = 327 | Back alignment and structure |
|
| >pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase In Complex With Arq 069 Length = 313 | Back alignment and structure |
|
| >pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain Length = 290 | Back alignment and structure |
|
| >pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild Type Fgf Receptor 2 (Fgfr2) Kinase Domain Length = 370 | Back alignment and structure |
|
| >pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target Length = 303 | Back alignment and structure |
|
| >pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex Length = 438 | Back alignment and structure |
|
| >pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based Allosteric Inhibitor Xl518 (Gdc-0973), Or Related Analogs. Length = 301 | Back alignment and structure |
|
| >pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp Analog And Substrate Peptide Length = 334 | Back alignment and structure |
|
| >pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma Kinase Catalytic Domain Length = 327 | Back alignment and structure |
|
| >pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure Length = 344 | Back alignment and structure |
|
| >pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Dephosphorylated, Amp-Pnp Bound Length = 373 | Back alignment and structure |
|
| >pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A Ruthenium Organometallic Ligand Ru1 Length = 312 | Back alignment and structure |
|
| >pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase Catalytic Subunit From Saccharomyces Cerevisiae Length = 318 | Back alignment and structure |
|
| >pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2- Yl]amino}phenyl)acetic Acid Length = 303 | Back alignment and structure |
|
| >pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex With Peptide Substrate And Atp Analog Length = 306 | Back alignment and structure |
|
| >pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5 Length = 317 | Back alignment and structure |
|
| >pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With Staurosporine Length = 309 | Back alignment and structure |
|
| >pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The Human Insulin Receptor Length = 306 | Back alignment and structure |
|
| >pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of The Insulin Receptor Tyrosine Kinase Length = 306 | Back alignment and structure |
|
| >pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7) Length = 318 | Back alignment and structure |
|
| >pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo Pyridine Inhibitor Length = 317 | Back alignment and structure |
|
| >pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of The Saccharomyces Cerevisiae Ampk Homolog Snf1 Length = 271 | Back alignment and structure |
|
| >pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast Snf1 Length = 274 | Back alignment and structure |
|
| >pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain Length = 283 | Back alignment and structure |
|
| >pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast Amp-Activated Protein Kinase Snf1 Length = 275 | Back alignment and structure |
|
| >pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain Length = 402 | Back alignment and structure |
|
| >pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex With N-(4- (5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h- Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide Length = 446 | Back alignment and structure |
|
| >pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric Inhibitor Length = 446 | Back alignment and structure |
|
| >pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With Ucb1353770 And Amppnp Length = 304 | Back alignment and structure |
|
| >pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1 Length = 328 | Back alignment and structure |
|
| >pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In Complex With The Sh2 Domain Of Aps Length = 306 | Back alignment and structure |
|
| >pdb|1A17|A Chain A, Tetratricopeptide Repeats Of Protein Phosphatase 5 Length = 166 | Back alignment and structure |
|
| >pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human Rsk-1 Bound To Amp-Pcp Length = 321 | Back alignment and structure |
|
| >pdb|1WAO|1 Chain 1, Pp5 Structure Length = 477 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A* Length = 307 | Back alignment and structure |
|---|
Score = 161 bits (411), Expect = 9e-47
Identities = 58/235 (24%), Positives = 106/235 (45%), Gaps = 32/235 (13%)
Query: 35 EAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWE-TQPMKWAMRLRVA 93
E K + + E L L+G + D+ LV +MPN +L L + T P+ W MR ++A
Sbjct: 80 EIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIA 139
Query: 94 LYLAQALEYCSSKGRALYHDLNAYR------ILFDKDGNPRLSSFGLMK-NSRDGKSY-S 145
A + + L+ + + +R IL D+ ++S FGL + + + ++ +
Sbjct: 140 QGAANGINF-------LHENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMT 192
Query: 146 TNLAFTP----PEYMRTGRVTPESVVYSFGTMLLDLLSGK-----HIPPSHALD-----L 191
+ + T PE + G +TP+S +YSFG +LL++++G H P LD
Sbjct: 193 SRIVGTTAYMAPEAL-RGEITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIKEEIE 251
Query: 192 IRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERPNAKSLVISLMSLQ 246
K +D + + + +AS+CL + +RP+ K + L +
Sbjct: 252 DEEKTIEDYIDKKMND-ADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEMT 305
|
| >3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3tl8_A* Length = 326 | Back alignment and structure |
|---|
Score = 156 bits (397), Expect = 2e-44
Identities = 61/221 (27%), Positives = 103/221 (46%), Gaps = 22/221 (9%)
Query: 35 EAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLF--HWETQPMKWAMRLRV 92
E + + L L G C ERLLV +M N ++A L P+ W R R+
Sbjct: 77 EVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRI 136
Query: 93 ALYLAQALEY--CSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSY-STNLA 149
AL A+ L Y + ++ D+ A IL D++ + FGL K ++ +T +
Sbjct: 137 ALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVR 196
Query: 150 FT----PPEYMRTGRVTPESVVYSFGTMLLDLLSGK-----HIPP--------SHALDLI 192
T PEY+ TG+ + ++ V+ +G MLL+L++G+ L+
Sbjct: 197 GTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLL 256
Query: 193 RSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERP 233
+ K L+D L+G++ ++E +L+++A C QS ERP
Sbjct: 257 KEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERP 297
|
| >2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A* Length = 321 | Back alignment and structure |
|---|
Score = 152 bits (387), Expect = 4e-43
Identities = 60/237 (25%), Positives = 109/237 (45%), Gaps = 23/237 (9%)
Query: 35 EAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLF--HWETQPMKWAMRLRV 92
E + + R L +LIG C E +E +L+ ++M N L +HL+ T M W RL +
Sbjct: 85 EIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEI 144
Query: 93 ALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMK-NSRDGKSY-STNLAF 150
+ A+ L Y ++ D+ + IL D++ P+++ FG+ K + +++ ST +
Sbjct: 145 CIGAARGLHYL-HTRAIIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLSTVVKG 203
Query: 151 TP----PEYMRTGRVTPESVVYSFGTMLLDLLSGK----HIPPSH-------ALDLIRSK 195
T PEY GR+T +S VYSFG +L ++L + P A++ +
Sbjct: 204 TLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNG 263
Query: 196 NFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERPNAKSLVISL---MSLQKEA 249
++D L + + A +CL + +RP+ ++ L + LQ+
Sbjct: 264 QLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYALRLQESV 320
|
| >3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 2qlu_A* Length = 322 | Back alignment and structure |
|---|
Score = 89.4 bits (222), Expect = 4e-20
Identities = 42/268 (15%), Positives = 79/268 (29%), Gaps = 44/268 (16%)
Query: 21 VLESSDLGETLNLEEAKAVGNLRSERLANLIGCCYEAD----ERLLVAEFMPNETLAKHL 76
+ D N E ++ ++ E + IG + L+ F +L+ L
Sbjct: 54 IFPIQDKQSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLWLITAFHEKGSLSDFL 113
Query: 77 FHWETQPMKWAMRLRVALYLAQALEYCSSKGRALY--------H-DLNAYRILFDKDGNP 127
+ W +A +A+ L Y L H D+ + +L +
Sbjct: 114 KA---NVVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTA 170
Query: 128 RLSSFGLMKNSRDGKSYSTNLAFT------PPEYMRTGRVTPESV-----VYSFGTMLLD 176
++ FGL GKS PE + +Y+ G +L +
Sbjct: 171 CIADFGLALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWE 230
Query: 177 LLSGK----------------HIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGT-ELVR 219
L S I +L+ ++ L ++ G L
Sbjct: 231 LASRCTAADGPVDEYMLPFEEEIGQHPSLEDMQEVVVHKKKRPVLRDYWQKHAGMAMLCE 290
Query: 220 LASRCLQSEARERPNAKSLVISLMSLQK 247
C +A R +A + + +Q+
Sbjct: 291 TIEECWDHDAEARLSAGCVGERITQMQR 318
|
| >3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} PDB: 3c4c_A* 3c4d_A* 3idp_A* 3ii5_A* 3d4q_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 2fb8_A* 4dbn_A* 1uwj_A* 1uwh_A* 3q96_A* Length = 289 | Back alignment and structure |
|---|
Score = 84.7 bits (210), Expect = 1e-18
Identities = 48/231 (20%), Positives = 92/231 (39%), Gaps = 24/231 (10%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERL-LVAEFMPNETLAKHLFHWETQPMKWAMRLR 91
E + R + +G +L +V ++ +L HL H + +
Sbjct: 68 KNEVGVLRKTRHVNILLFMGYSTA--PQLAIVTQWCEGSSLYHHL-HASETKFEMKKLID 124
Query: 92 VALYLAQALEYCSSKGRALYH-DLNAYRILFDKDGNPRLSSFGL--MKNSRDGKSYSTNL 148
+A A+ ++Y +K + H DL + I +D ++ FGL K+ G L
Sbjct: 125 IARQTARGMDYLHAKS--IIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQL 182
Query: 149 AFTP----PEYMRTGRVTPESV---VYSFGTMLLDLLSGK----HIPPSHALDLIRSKNF 197
+ + PE +R P S VY+FG +L +L++G+ +I + I
Sbjct: 183 SGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQI--IEMVGR 240
Query: 198 LLLMDSALEGHFSNDEGTELVRLASRCLQSEARERPNAKSLVISLMSLQKE 248
L + + + + RL + CL+ + ERP+ ++ + L +E
Sbjct: 241 GSLSPDLSKVRSNCPK--RMKRLMAECLKKKRDERPSFPRILAEIEELARE 289
|
| >3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A* Length = 309 | Back alignment and structure |
|---|
Score = 84.3 bits (209), Expect = 2e-18
Identities = 48/230 (20%), Positives = 95/230 (41%), Gaps = 18/230 (7%)
Query: 35 EAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLF-HWETQPMKWAMRLRVA 93
E + LR + +G + +V E++ +L + L + + RL +A
Sbjct: 84 EVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMA 143
Query: 94 LYLAQALEYCSSKGRALYH-DLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLAFTP 152
+A+ + Y ++ + H +L + +L DK ++ FGL + S + A TP
Sbjct: 144 YDVAKGMNYLHNRNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTFLSSKSAAGTP 203
Query: 153 ----PEYMRTGRVTPESVVYSFGTMLLDLLSGK----HIPPSHALDLIRSKNFLLLMDSA 204
PE +R +S VYSFG +L +L + + ++ P+ + + K L
Sbjct: 204 EWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVGFKCKRL----- 258
Query: 205 LEGHFSNDEGTELVRLASRCLQSEARERPNAKSLVISLMSLQKEAEQVPS 254
+ ++ + C +E +RP+ +++ L L K A P+
Sbjct: 259 ---EIPRNLNPQVAAIIEGCWTNEPWKRPSFATIMDLLRPLIKSAVPPPN 305
|
| >3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} PDB: 3kmw_A* 3rep_A* Length = 271 | Back alignment and structure |
|---|
Score = 79.2 bits (196), Expect = 6e-17
Identities = 35/225 (15%), Positives = 79/225 (35%), Gaps = 19/225 (8%)
Query: 34 EEAKAVGNLRSERLANLIGCCYEADERLL--VAEFMPNETLAKHLFHWETQPMKWAMRLR 91
EE + + ++G C + +MP +L L + + ++
Sbjct: 56 EECPRLRIFSHPNVLPVLGACQSPPAPHPTLITHWMPYGSLYNVLHEGTNFVVDQSQAVK 115
Query: 92 VALYLAQALEYCSSKGRALYH-DLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLAF 150
AL +A+ + + + + LN+ ++ D+D R+S + K S A+
Sbjct: 116 FALDMARGMAFLHTLEPLIPRHALNSRSVMIDEDMTARISMADV-KFSFQSPGRMYAPAW 174
Query: 151 TPPEYMRTGRVTPESV---VYSFGTMLLDLLSGK----HIPPSHALDLIRSKNFLLLMDS 203
PE ++ ++SF +L +L++ + + + + +
Sbjct: 175 VAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSNMEIGMKVALEGLRPTIPP 234
Query: 204 ALEGHFSNDEGTELVRLASRCLQSEARERPNAKSLVISLMSLQKE 248
+ H S L C+ + +RP +V L +Q +
Sbjct: 235 GISPHVSK--------LMKICMNEDPAKRPKFDMIVPILEKMQDK 271
|
| >2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens} Length = 307 | Back alignment and structure |
|---|
Score = 78.5 bits (194), Expect = 2e-16
Identities = 44/227 (19%), Positives = 88/227 (38%), Gaps = 22/227 (9%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQP-MKWAMRLR 91
+ E + + + + L G C LV E+ +L L E P A +
Sbjct: 49 IVELRQLSRVNHPNIVKLYGACLNP--VCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMS 106
Query: 92 VALYLAQALEYC-SSKGRALYH-DLNAYRILFDKDGN-PRLSSFGLMKNSRDGKSYSTNL 148
L +Q + Y S + +AL H DL +L G ++ FG + D +++ TN
Sbjct: 107 WCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGT---ACDIQTHMTNN 163
Query: 149 AFTP----PEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSA 204
+ PE + + V+S+G +L ++++ + P + + +M +
Sbjct: 164 KGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRK--PFDEIGGPAFR----IMWAV 217
Query: 205 LEGH---FSNDEGTELVRLASRCLQSEARERPNAKSLVISLMSLQKE 248
G + + L +RC + +RP+ + +V + L +
Sbjct: 218 HNGTRPPLIKNLPKPIESLMTRCWSKDPSQRPSMEEIVKIMTHLMRY 264
|
| >3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens} Length = 310 | Back alignment and structure |
|---|
Score = 75.5 bits (186), Expect = 2e-15
Identities = 46/238 (19%), Positives = 89/238 (37%), Gaps = 25/238 (10%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQPMKWAMRLRV 92
L+E K + L + IG Y+ + E++ TL + W+ R+
Sbjct: 55 LKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEYIKGGTLRGII-KSMDSQYPWSQRVSF 113
Query: 93 ALYLAQALEYCSSKGRALYH-DLNAYRILFDKDGNPRLSSFGL--------------MKN 137
A +A + Y S + H DLN++ L ++ N ++ FGL
Sbjct: 114 AKDIASGMAYLHSMN--IIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSL 171
Query: 138 SRDGKSYSTNLAFTP----PEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIR 193
+ + + P PE + + V+SFG +L +++ + P + L R
Sbjct: 172 KKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDY---LPR 228
Query: 194 SKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERPNAKSLVISLMSLQKEAEQ 251
+ +F L + L+ + + + RC + +RP+ L L +L+
Sbjct: 229 TMDFGLNVRGFLDRYCPPNCPPSFFPITVRCCDLDPEKRPSFVKLEHWLETLRMHLAG 286
|
| >1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1 Length = 118 | Back alignment and structure |
|---|
Score = 70.7 bits (174), Expect = 4e-15
Identities = 26/115 (22%), Positives = 48/115 (41%), Gaps = 12/115 (10%)
Query: 316 MQETLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPT---VYARRCLSYLMNDMPQE 372
M++ K+ G+ A + A+ CY++ I + P +Y+ R +Y Q+
Sbjct: 1 MEQVNELKEKGNKALSVGNIDDALQCYSEAIK----LDPHNHVLYSNRSAAYAKKGDYQK 56
Query: 373 ALGDAMQAQVVSPDWPTALYLQAACLFSLGMENDARETLK-----DGTNLEAKKN 422
A D + + PDW +AA L L +A+ T + + N + K+
Sbjct: 57 AYEDGCKTVDLKPDWGKGYSRKAAALEFLNRFEEAKRTYEEGLKHEANNPQLKEG 111
|
| >2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens} Length = 319 | Back alignment and structure |
|---|
Score = 72.8 bits (179), Expect = 2e-14
Identities = 41/237 (17%), Positives = 74/237 (31%), Gaps = 35/237 (14%)
Query: 35 EAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQPMKWAMRLRVAL 94
E A R E + +G C ++ TL + + ++A
Sbjct: 79 EVMAYRQTRHENVVLFMGACMSPPHLAIITSLCKGRTLYSVV-RDAKIVLDVNKTRQIAQ 137
Query: 95 YLAQALEYCSSKGRALYH-DLNAYRILFDKDGNPRLSSFGL--MKNSRDGKSYSTNLAFT 151
+ + + Y +KG + H DL + + +D +G ++ FGL + L
Sbjct: 138 EIVKGMGYLHAKG--ILHKDLKSKNVFYD-NGKVVITDFGLFSISGVLQAGRREDKLRIQ 194
Query: 152 P-------PEYMRTGRVTPESV---------VYSFGTMLLDLLSGK----HIPPSHALDL 191
PE +R E V++ GT+ +L + + P +
Sbjct: 195 NGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAEAIIWQ 254
Query: 192 IRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERPNAKSLVISLMSLQKE 248
+ + G E+ + C E ERP L+ L L K
Sbjct: 255 MG-TGMKPNLS-------QIGMGKEISDILLFCWAFEQEERPTFTKLMDMLEKLPKR 303
|
| >4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A* Length = 287 | Back alignment and structure |
|---|
Score = 72.3 bits (178), Expect = 2e-14
Identities = 49/223 (21%), Positives = 87/223 (39%), Gaps = 20/223 (8%)
Query: 35 EAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQPMKWAMRLRVAL 94
E + NL + L G + +V EF+P L L + P+KW+++LR+ L
Sbjct: 73 EVFIMSNLNHPNIVKLYGLMHNPP--RMVMEFVPCGDLYHRL-LDKAHPIKWSVKLRLML 129
Query: 95 YLAQALEYCSSKGRALYH-DLNAYRILFDKDG-----NPRLSSFGLMKNSRDGKSYSTNL 148
+A +EY ++ + H DL + I +++ FGL S+ + L
Sbjct: 130 DIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGL---SQQSVHSVSGL 186
Query: 149 AFTP----PE--YMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMD 202
PE T ++ YSF +L +L+G+ P + K ++ +
Sbjct: 187 LGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEG--PFDEYSYGKIKFINMIRE 244
Query: 203 SALEGHFSNDEGTELVRLASRCLQSEARERPNAKSLVISLMSL 245
L D L + C + ++RP+ +V L L
Sbjct: 245 EGLRPTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVKELSEL 287
|
| >3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens} Length = 336 | Back alignment and structure |
|---|
Score = 70.6 bits (173), Expect = 1e-13
Identities = 44/265 (16%), Positives = 79/265 (29%), Gaps = 55/265 (20%)
Query: 42 LRSERLANLIGCCYEAD-----ERLLVAEFMPNETLAKHLFHWETQPMKWAMRLRVALYL 96
+ + +A I E LLV E+ PN +L K+L W R+A +
Sbjct: 64 MEHDNIARFIVGDERVTADGRMEYLLVMEYYPNGSLXKYLSL---HTSDWVSSCRLAHSV 120
Query: 97 AQALEY-------CSSKGRALYH-DLNAYRILFDKDGNPRLSSFGL--------MKNSRD 140
+ L Y A+ H DLN+ +L DG +S FGL + +
Sbjct: 121 TRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGE 180
Query: 141 GKSYSTNLAFTP----PEYMR-------TGRVTPESVVYSFGTMLLDLLSGK------HI 183
+ + + T PE + + +Y+ G + ++
Sbjct: 181 EDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGES 240
Query: 184 PPSHAL---DLIRSKNFLLLMDSA---------LEGHFSNDEGT--ELVRLASRCLQSEA 229
P + + + + M + + L C +A
Sbjct: 241 VPEYQMAFQTEVGNHPTFEDMQVLVSREKQRPKFPEAWKENSLAVRSLKETIEDCWDQDA 300
Query: 230 RERPNAKSLVISLMSLQKEAEQVPS 254
R A+ + L E+ S
Sbjct: 301 EARLTAQXAEERMAELMMIWERNKS 325
|
| >3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus} Length = 164 | Back alignment and structure |
|---|
Score = 66.7 bits (163), Expect = 2e-13
Identities = 27/99 (27%), Positives = 42/99 (42%), Gaps = 7/99 (7%)
Query: 323 KKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTV---YARRCLSYLMNDMPQEALGDAMQ 379
K G+ A K++S AID YTQ + ++P + R +Y + ++A DA
Sbjct: 15 KSEGNAAMARKEYSKAIDLYTQALS----IAPANPIYLSNRAAAYSASGQHEKAAEDAEL 70
Query: 380 AQVVSPDWPTALYLQAACLFSLGMENDARETLKDGTNLE 418
A VV P + A F + A+E + G E
Sbjct: 71 ATVVDPKYSKAWSRLGLARFDMADYKGAKEAYEKGIEAE 109
|
| >1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A Length = 166 | Back alignment and structure |
|---|
Score = 66.6 bits (163), Expect = 3e-13
Identities = 30/108 (27%), Positives = 48/108 (44%), Gaps = 12/108 (11%)
Query: 323 KKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPT---VYARRCLSYLMNDMPQEALGDAMQ 379
K + F+AKD+ AI Y+Q I+ ++P+ Y R L+YL + ALGDA +
Sbjct: 17 KTQANDYFKAKDYENAIKFYSQAIE----LNPSNAIYYGNRSLAYLRTECYGYALGDATR 72
Query: 380 AQVVSPDWPTALYLQAACLFSLGMENDARETLK-----DGTNLEAKKN 422
A + + Y +AA +LG A + + +AK
Sbjct: 73 AIELDKKYIKGYYRRAASNMALGKFRAALRDYETVVKVKPHDKDAKMK 120
|
| >3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} Length = 271 | Back alignment and structure |
|---|
Score = 68.1 bits (167), Expect = 4e-13
Identities = 46/232 (19%), Positives = 85/232 (36%), Gaps = 33/232 (14%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQPMKWAMRLRV 92
+EAK L+ + L G C + LV EF L + L + + + +
Sbjct: 54 RQEAKLFAMLKHPNIIALRGVCLKEPNLCLVMEFARGGPLNRVL---SGKRIPPDILVNW 110
Query: 93 ALYLAQALEYC-SSKGRALYH-DLNAYRILFDKDGNPRLSS--------FGLMKNSRD-G 141
A+ +A+ + Y + H DL + IL + S FGL +R+
Sbjct: 111 AVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGL---AREWH 167
Query: 142 KSYSTNLAFTP----PEYMRTGRVTPESVVYSFGTMLLDLLSGK----HIPPSHALDLIR 193
++ + A PE +R + S V+S+G +L +LL+G+ I +
Sbjct: 168 RTTKMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAVAYGVA 227
Query: 194 SKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERPNAKSLVISLMSL 245
L + S +L C + RP+ +++ L ++
Sbjct: 228 MNKLALPIPSTCP--------EPFAKLMEDCWNPDPHSRPSFTNILDQLTTI 271
|
| >4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans} Length = 126 | Back alignment and structure |
|---|
Score = 64.5 bits (158), Expect = 5e-13
Identities = 23/108 (21%), Positives = 42/108 (38%), Gaps = 12/108 (11%)
Query: 323 KKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPT---VYARRCLSYLMNDMPQEALGDAMQ 379
K G+ F+ D+ TA+ Y + + P +Y+ R Q AL D
Sbjct: 17 KNKGNEYFKKGDYPTAMRHYNEAVK----RDPENAILYSNRAACLTKLMEFQRALDDCDT 72
Query: 380 AQVVSPDWPTALYLQAACLFSLGMENDARETLK-----DGTNLEAKKN 422
+ + +AACL ++ + A+ + D +N EA++
Sbjct: 73 CIRLDSKFIKGYIRKAACLVAMREWSKAQRAYEDALQVDPSNEEAREG 120
|
| >2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens} Length = 133 | Back alignment and structure |
|---|
Score = 63.4 bits (155), Expect = 2e-12
Identities = 24/108 (22%), Positives = 41/108 (37%), Gaps = 12/108 (11%)
Query: 323 KKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPT---VYARRCLSYLMNDMPQEALGDAMQ 379
K G+ F+ D+ A+ YT+ I +P +Y+ R Y Q AL D +
Sbjct: 20 KNKGNECFQKGDYPQAMKHYTEAIK----RNPKDAKLYSNRAACYTKLLEFQLALKDCEE 75
Query: 380 AQVVSPDWPTALYLQAACLFSLGMENDARETLK-----DGTNLEAKKN 422
+ P + +AA L ++ A + + D + EA
Sbjct: 76 CIQLEPTFIKGYTRKAAALEAMKDYTKAMDVYQKALDLDSSCKEAADG 123
|
| >3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B* Length = 137 | Back alignment and structure |
|---|
Score = 63.1 bits (154), Expect = 2e-12
Identities = 25/105 (23%), Positives = 43/105 (40%), Gaps = 7/105 (6%)
Query: 323 KKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTV---YARRCLSYLMNDMPQEALGDAMQ 379
K+ G+ F + + A CY + I +P V Y R L YL P++AL D +
Sbjct: 13 KEQGNRLFVGRKYPEAAACYGRAIT----RNPLVAVYYTNRALCYLKMQQPEQALADCRR 68
Query: 380 AQVVSPDWPTALYLQAACLFSLGMENDARETLKDGTNLEAKKNKN 424
A + A + C + ++A L+ +L ++ N
Sbjct: 69 ALELDGQSVKAHFFLGQCQLEMESYDEAIANLQRAYSLAKEQRLN 113
|
| >2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1 Length = 131 | Back alignment and structure |
|---|
Score = 61.8 bits (151), Expect = 6e-12
Identities = 23/108 (21%), Positives = 39/108 (36%), Gaps = 12/108 (11%)
Query: 323 KKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPT---VYARRCLSYLMNDMPQEALGDAMQ 379
K G+ + ++F A+ Y + I+ ++P + R +Y A+ D +
Sbjct: 16 KTEGNEQMKVENFEAAVHFYGKAIE----LNPANAVYFCNRAAAYSKLGNYAGAVQDCER 71
Query: 380 AQVVSPDWPTALYLQAACLFSLGMENDARETLK-----DGTNLEAKKN 422
A + P + A L SL +A K D N K N
Sbjct: 72 AICIDPAYSKAYGRMGLALSSLNKHVEAVAYYKKALELDPDNETYKSN 119
|
| >2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2 Length = 281 | Back alignment and structure |
|---|
Score = 64.9 bits (158), Expect = 6e-12
Identities = 25/105 (23%), Positives = 43/105 (40%), Gaps = 7/105 (6%)
Query: 323 KKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTV---YARRCLSYLMNDMPQEALGDAMQ 379
K+ G+ F + + A CY + I +P V Y R L YL P++AL D +
Sbjct: 8 KEQGNRLFVGRKYPEAAACYGRAIT----RNPLVAVYYTNRALCYLKMQQPEQALADCRR 63
Query: 380 AQVVSPDWPTALYLQAACLFSLGMENDARETLKDGTNLEAKKNKN 424
A + A + C + ++A L+ +L ++ N
Sbjct: 64 ALELDGQSVKAHFFLGQCQLEMESYDEAIANLQRAYSLAKEQRLN 108
|
| >3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} Length = 413 | Back alignment and structure |
|---|
Score = 64.7 bits (157), Expect = 1e-11
Identities = 29/214 (13%), Positives = 59/214 (27%), Gaps = 36/214 (16%)
Query: 80 ETQPMKWAMRLRVALYLAQALEYCSSKGRALYH-DL---NAYRILFDKDGNPRLSSFGLM 135
+ + RL++ L + + L G L H L + I+ D+ G L+ F +
Sbjct: 204 THKSLVHHARLQLTLQVIRLLASLHHYG--LVHTYLRPVD---IVLDQRGGVFLTGFEHL 258
Query: 136 KNSRDGKSYSTNLAFTPPEYM----------RTGRVTPESVVYSFGTMLLDLLSGKHIPP 185
F PPE +T ++ G + + P
Sbjct: 259 VRDGASAVSPIGRGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIYWIWCAD--LP 316
Query: 186 SHALDLIRSKNFLLLMDSALEGHFSNDEGT--ELVRLASRCLQSEARERPNAKSLVISLM 243
+ + E F + + + L L+ +R +
Sbjct: 317 NTDDAALGG----------SEWIFRSCKNIPQPVRALLEGFLRYPKEDRLLPLQ-AMETP 365
Query: 244 SLQKEAEQVPSYV--LLGIQHETAPSTKPLSLTP 275
++ ++ + + T P S T
Sbjct: 366 EYEQLRTELSAALPLYQTDGEPTREGGAPPSGTS 399
|
| >3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A* Length = 377 | Back alignment and structure |
|---|
Score = 64.2 bits (157), Expect = 2e-11
Identities = 51/228 (22%), Positives = 87/228 (38%), Gaps = 24/228 (10%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQPMKWAMRLRV 92
L+EA+ + + LIG C + +V E + L E ++ L++
Sbjct: 160 LQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFL-RTEGARLRVKTLLQM 218
Query: 93 ALYLAQALEYCSSKGRALYH-DLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLAF- 150
A +EY SK H DL A L + ++S FG+ + DG ++
Sbjct: 219 VGDAAAGMEYLESKC--CIHRDLAARNCLVTEKNVLKISDFGMSREEADGVYAASGGLRQ 276
Query: 151 -----TPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIP-----PSHALDLIRSKNFLLL 200
T PE + GR + ES V+SFG +L + S P + + L
Sbjct: 277 VPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQQTREFVEKGGRLPC 336
Query: 201 MDSALEGHFSNDEGTELVRLASRCLQSEARERPNAKSLVISLMSLQKE 248
+ + + RL +C E +RP+ ++ L S++K
Sbjct: 337 PELCPD---------AVFRLMEQCWAYEPGQRPSFSTIYQELQSIRKR 375
|
| >1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A Length = 495 | Back alignment and structure |
|---|
Score = 64.4 bits (157), Expect = 2e-11
Identities = 48/245 (19%), Positives = 97/245 (39%), Gaps = 27/245 (11%)
Query: 17 LKSSVLESSDLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHL 76
LK +E + L+EA + ++ L L+G C ++ EFM L +L
Sbjct: 253 LKEDTMEVEEF-----LKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL 307
Query: 77 FHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYH-DLNAYRILFDKDGNPRLSSFGLM 135
Q + + L +A ++ A+EY K H +L A L ++ +++ FGL
Sbjct: 308 RECNRQEVSAVVLLYMATQISSAMEYLEKKN--FIHRNLAARNCLVGENHLVKVADFGLS 365
Query: 136 KNSRDGKSYSTNLA-----FTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIP-----P 185
+ + A +T PE + + + +S V++FG +L ++ + P
Sbjct: 366 RLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDL 425
Query: 186 SHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERPNAKSLVISLMSL 245
S +L+ + + E ++ L C Q +RP+ + + ++
Sbjct: 426 SQVYELLEKDYRMERPEGCPE---------KVYELMRACWQWNPSDRPSFAEIHQAFETM 476
Query: 246 QKEAE 250
+E+
Sbjct: 477 FQESS 481
|
| >1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 3fpq_A Length = 290 | Back alignment and structure |
|---|
Score = 61.6 bits (150), Expect = 7e-11
Identities = 38/213 (17%), Positives = 74/213 (34%), Gaps = 14/213 (6%)
Query: 34 EEAKAVGNLRSERLANLIGCC---YEADERL-LVAEFMPNETLAKHLFHWETQPMKWAMR 89
EEA+ + L+ + + + + LV E M + TL +L + MK +
Sbjct: 74 EEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVTELMTSGTLKTYL--KRFKVMKIKVL 131
Query: 90 LRVALYLAQALEYCSSKGRALYH-DLNAYRILFD-KDGNPRLSSFGLMKNSRDGKSYST- 146
+ + L++ ++ + H DL I G+ ++ GL R + +
Sbjct: 132 RSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRASFAKAVI 191
Query: 147 -NLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSAL 205
F PE VY+FG +L++ + + P + +
Sbjct: 192 GTPEFMAPEMYEEK-YDESVDVYAFGMCMLEMATSE--YPYSECQNAAQ-IYRRVTSGVK 247
Query: 206 EGHFSNDEGTELVRLASRCLQSEARERPNAKSL 238
F E+ + C++ ER + K L
Sbjct: 248 PASFDKVAIPEVKEIIEGCIRQNKDERYSIKDL 280
|
| >1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3 Length = 477 | Back alignment and structure |
|---|
Score = 62.4 bits (152), Expect = 9e-11
Identities = 27/99 (27%), Positives = 43/99 (43%), Gaps = 1/99 (1%)
Query: 314 SQMQETLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEA 373
++ K + F+AKD+ AI Y+Q I+ + Y R L+YL + A
Sbjct: 1 GALKRAEELKTQANDYFKAKDYENAIKFYSQAIELNPS-NAIYYGNRSLAYLRTECYGYA 59
Query: 374 LGDAMQAQVVSPDWPTALYLQAACLFSLGMENDARETLK 412
LGDA +A + + Y +AA +LG A +
Sbjct: 60 LGDATRAIELDKKYIKGYYRRAASNMALGKFRAALRDYE 98
|
| >1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A Length = 450 | Back alignment and structure |
|---|
Score = 62.0 bits (151), Expect = 1e-10
Identities = 41/148 (27%), Positives = 66/148 (44%), Gaps = 11/148 (7%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERL-LVAEFMPNETLAKHLFHWETQPMKWAMRLR 91
L EA + LR L L+G E L +V E+M +L +L + L+
Sbjct: 234 LAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLK 293
Query: 92 VALYLAQALEYCSSKGRALYH-DLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLAF 150
+L + +A+EY H DL A +L +D ++S FGL +++ S
Sbjct: 294 FSLDVCEAMEYLEGNN--FVHRDLAARNVLVSEDNVAKVSDFGL---TKEASSTQDTGKL 348
Query: 151 ----TPPEYMRTGRVTPESVVYSFGTML 174
T PE +R + + +S V+SFG +L
Sbjct: 349 PVKWTAPEALREKKFSTKSDVWSFGILL 376
|
| >1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A* Length = 278 | Back alignment and structure |
|---|
Score = 60.3 bits (147), Expect = 2e-10
Identities = 41/148 (27%), Positives = 66/148 (44%), Gaps = 11/148 (7%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERL-LVAEFMPNETLAKHLFHWETQPMKWAMRLR 91
L EA + LR L L+G E L +V E+M +L +L + L+
Sbjct: 62 LAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLK 121
Query: 92 VALYLAQALEYCSSKGRALYH-DLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLAF 150
+L + +A+EY H DL A +L +D ++S FGL +++ S
Sbjct: 122 FSLDVCEAMEYLEGNN--FVHRDLAARNVLVSEDNVAKVSDFGL---TKEASSTQDTGKL 176
Query: 151 ----TPPEYMRTGRVTPESVVYSFGTML 174
T PE +R + + +S V+SFG +L
Sbjct: 177 PVKWTAPEALREKKFSTKSDVWSFGILL 204
|
| >1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ... Length = 452 | Back alignment and structure |
|---|
Score = 61.3 bits (149), Expect = 2e-10
Identities = 42/158 (26%), Positives = 72/158 (45%), Gaps = 9/158 (5%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQPMKWAMRLRV 92
L+EA+ + LR E+L L E + +V E+M +L L + ++ + +
Sbjct: 227 LQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDM 285
Query: 93 ALYLAQALEYCSSKGRALYH-DLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLA-- 149
A +A + Y H DL A IL ++ +++ FGL + D + + A
Sbjct: 286 AAQIASGMAYVERMN--YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKF 343
Query: 150 ---FTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIP 184
+T PE GR T +S V+SFG +L +L + +P
Sbjct: 344 PIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVP 381
|
| >2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 148 | Back alignment and structure |
|---|
Score = 58.1 bits (141), Expect = 2e-10
Identities = 23/107 (21%), Positives = 43/107 (40%), Gaps = 7/107 (6%)
Query: 323 KKHGDTAFRAKDFSTAIDCYTQFI--DGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQA 380
+K G+ F+ D+ A+ YTQ + D ++ R +L + +A +A +A
Sbjct: 32 RKEGNELFKCGDYGGALAAYTQALGLDATPQDQAVLHRNRAACHLKLEDYDKAETEASKA 91
Query: 381 QVVSPDWPTALYLQAACLFSLGMENDARETLK-----DGTNLEAKKN 422
ALY ++ L LG + A L+ + N ++
Sbjct: 92 IEKDGGDVKALYRRSQALEKLGRLDQAVLDLQRCVSLEPKNKVFQEA 138
|
| >2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 Length = 535 | Back alignment and structure |
|---|
Score = 61.4 bits (149), Expect = 2e-10
Identities = 42/158 (26%), Positives = 72/158 (45%), Gaps = 9/158 (5%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQPMKWAMRLRV 92
L+EA+ + LR E+L L E + +V E+M +L L + ++ + +
Sbjct: 310 LQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDM 368
Query: 93 ALYLAQALEYCSSKGRALYH-DLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLA-- 149
A +A + Y H DL A IL ++ +++ FGL + D + + A
Sbjct: 369 AAQIASGMAYVERMN--YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKF 426
Query: 150 ---FTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIP 184
+T PE GR T +S V+SFG +L +L + +P
Sbjct: 427 PIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVP 464
|
| >1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B Length = 454 | Back alignment and structure |
|---|
Score = 60.9 bits (148), Expect = 3e-10
Identities = 38/174 (21%), Positives = 72/174 (41%), Gaps = 14/174 (8%)
Query: 17 LKSSVLESSDLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHL 76
+K + L EA + L+ ++L L + + ++ EFM +L L
Sbjct: 220 MKPGSMSVEAF-----LAEANVMKTLQHDKLVKLHAVVTK-EPIYIITEFMAKGSLLDFL 273
Query: 77 FHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYH-DLNAYRILFDKDGNPRLSSFGLM 135
E + + +A+ + + + H DL A IL +++ FGL
Sbjct: 274 KSDEGSKQPLPKLIDFSAQIAEGMAFIEQRN--YIHRDLRAANILVSASLVCKIADFGLA 331
Query: 136 KNSRDGKSYSTNLA-----FTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIP 184
+ D + + A +T PE + G T +S V+SFG +L+++++ IP
Sbjct: 332 RVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIP 385
|
| >3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae} Length = 126 | Back alignment and structure |
|---|
Score = 56.1 bits (136), Expect = 4e-10
Identities = 23/103 (22%), Positives = 39/103 (37%), Gaps = 7/103 (6%)
Query: 323 KKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTV---YARRCLSYLMNDMPQEALGDAMQ 379
+ G F D+ A+ YT+ I +P Y+ R + EA+ D +
Sbjct: 8 RLEGKEYFTKSDWPNAVKAYTEMIK----RAPEDARGYSNRAAALAKLMSFPEAIADCNK 63
Query: 380 AQVVSPDWPTALYLQAACLFSLGMENDARETLKDGTNLEAKKN 422
A P++ A +A ++ A ETL +A+ N
Sbjct: 64 AIEKDPNFVRAYIRKATAQIAVKEYASALETLDAARTKDAEVN 106
|
| >3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A* Length = 371 | Back alignment and structure |
|---|
Score = 59.7 bits (144), Expect = 6e-10
Identities = 24/167 (14%), Positives = 43/167 (25%), Gaps = 15/167 (8%)
Query: 83 PMKWAMRLRVALYLAQALEYCSSKGRALYH-DL---NAYRILFDKDGNPRLSSFGL-MKN 137
+ L + SKG L H N + DG L K
Sbjct: 190 DEGILALHILTAQLIRLAANLQSKG--LVHGHFTPDN---LFIMPDGRLMLGDVSALWKV 244
Query: 138 SRDGKSYSTNLAFTPPEYM--RTGRVTPESVVYSFGTMLLDLLSGK---HIPPSHALDLI 192
G + S + + P E++ T T + G + + +
Sbjct: 245 GTRGPASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCLFLPFGLVTPGIKGSW 304
Query: 193 RSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERPNAKSLV 239
+ + + +L + L R L + R R +
Sbjct: 305 KRPSLRVPGTDSLAFGSCTPLPDFVKTLIGRFLNFDRRRRLLPLEAM 351
|
| >3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* Length = 318 | Back alignment and structure |
|---|
Score = 58.9 bits (143), Expect = 6e-10
Identities = 58/250 (23%), Positives = 97/250 (38%), Gaps = 40/250 (16%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADER--LLVAEFMPNETLAKHLFHWETQPMKWAMRL 90
+E + L E + GCC +A LV E++P +L +L + A L
Sbjct: 81 KQEIDILRTLYHEHIIKYKGCCEDAGAASLQLVMEYVPLGSLRDYL---PRHSIGLAQLL 137
Query: 91 RVALYLAQALEYCSSKGRALYH-DLNAYRILFDKDGNPRLSSFGLMKNSRDGKSY---ST 146
A + + + Y ++ H DL A +L D D ++ FGL K +G Y
Sbjct: 138 LFAQQICEGMAYLHAQH--YIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVRE 195
Query: 147 NLAF----TPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMD 202
+ PE ++ + S V+SFG L +LL +H L +
Sbjct: 196 DGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELL-------THCDSSQSPPTKFLELI 248
Query: 203 SALEGHFSNDEGTELV----RLA-------------SRCLQSEARERPNAKSLVISLMSL 245
+G + TEL+ RL C ++EA RP ++L+ L ++
Sbjct: 249 GIAQGQMTVLRLTELLERGERLPRPDKCPAEVYHLMKNCWETEASFRPTFENLIPILKTV 308
Query: 246 QKEAE-QVPS 254
++ + Q PS
Sbjct: 309 HEKYQGQAPS 318
|
| >3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ... Length = 288 | Back alignment and structure |
|---|
Score = 58.0 bits (141), Expect = 1e-09
Identities = 49/245 (20%), Positives = 97/245 (39%), Gaps = 27/245 (11%)
Query: 17 LKSSVLESSDLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHL 76
LK +E + L+EA + ++ L L+G C ++ EFM L +L
Sbjct: 46 LKEDTMEVEEF-----LKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL 100
Query: 77 FHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYH-DLNAYRILFDKDGNPRLSSFGLM 135
Q + + L +A ++ A+EY K H DL A L ++ +++ FGL
Sbjct: 101 RECNRQEVSAVVLLYMATQISSAMEYLEKKN--FIHRDLAARNCLVGENHLVKVADFGLS 158
Query: 136 KNSRDGKSYSTNLA-----FTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIP-----P 185
+ + A +T PE + + + +S V++FG +L ++ + P
Sbjct: 159 RLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDL 218
Query: 186 SHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERPNAKSLVISLMSL 245
S +L+ + + E ++ L C Q +RP+ + + ++
Sbjct: 219 SQVYELLEKDYRMERPEGCPE---------KVYELMRACWQWNPSDRPSFAEIHQAFETM 269
Query: 246 QKEAE 250
+E+
Sbjct: 270 FQESS 274
|
| >3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A Length = 377 | Back alignment and structure |
|---|
Score = 58.5 bits (141), Expect = 1e-09
Identities = 29/201 (14%), Positives = 57/201 (28%), Gaps = 34/201 (16%)
Query: 55 YEADERLLVAEFM--PNETLAKHLFHWETQ--PMKWAMRLRVALYLAQALEYCSSKGRAL 110
R + M +T + L + + RL++ L + + L G L
Sbjct: 170 MWVLSRFFLYPRMQSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYG--L 227
Query: 111 YH-DL---NAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLAFTPPEYM---------- 156
H L + I+ D+ G L+ F + S + F PPE
Sbjct: 228 VHTYLRPVD---IVLDQRGGVFLTGFEHLVRDGARVVSSVSRGFEPPELEARRATISYHR 284
Query: 157 -RTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGT 215
R +T ++ G ++ + P + ++ +
Sbjct: 285 DRRTLMTFSFDAWALGLVIYWIWCAD--LPITKDAALGGSEWIF----RSCKNIP----Q 334
Query: 216 ELVRLASRCLQSEARERPNAK 236
+ L L+ +R
Sbjct: 335 PVRALLEGFLRYPKEDRLLPL 355
|
| >2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens} Length = 326 | Back alignment and structure |
|---|
Score = 57.8 bits (140), Expect = 2e-09
Identities = 47/245 (19%), Positives = 93/245 (37%), Gaps = 36/245 (14%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADER--LLVAEFMPNETLAKHLFHWETQPMKWAMRL 90
E + + +L+ + + G CY A R L+ E++P +L +L + + + L
Sbjct: 90 EREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER-IDHIKLL 148
Query: 91 RVALYLAQALEYCSSKGRALYH-DLNAYRILFDKDGNPRLSSFGLMKNSRDGKSY---ST 146
+ + + +EY +K H DL IL + + ++ FGL K K Y
Sbjct: 149 QYTSQICKGMEYLGTKR--YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKE 206
Query: 147 NLAF----TPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMD 202
PE + + + S V+SFG +L +L + S F+ ++
Sbjct: 207 PGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKS------PPAEFMRMIG 260
Query: 203 SALEGHFSNDEGTELV----RLA-------------SRCLQSEARERPNAKSLVISLMSL 245
+ +G EL+ RL + C + +RP+ + L + + +
Sbjct: 261 NDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQI 320
Query: 246 QKEAE 250
+ +
Sbjct: 321 RDQMA 325
|
| >1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A* Length = 342 | Back alignment and structure |
|---|
Score = 57.9 bits (140), Expect = 2e-09
Identities = 39/270 (14%), Positives = 84/270 (31%), Gaps = 46/270 (17%)
Query: 21 VLESSDLGETLNLEEAKAVGNLRSERLANLIGCCYEAD----ERLLVAEFMPNETLAKHL 76
+ S + E LR E + I + + + LV+++ + +L +L
Sbjct: 72 IFSSREERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYL 131
Query: 77 FHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYH-------DLNAYRILFDKDGNPRL 129
+ +++AL A L + + DL + IL K+G +
Sbjct: 132 ---NRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCI 188
Query: 130 SSFGL----MKNSRDGKSYSTNLAFTP----PEYMRTGRVTPESV-------VYSFGTML 174
+ GL + + T PE + + + +Y+ G +
Sbjct: 189 ADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLD-DSINMKHFESFKRADIYAMGLVF 247
Query: 175 LDLLSGKHI---PPSHAL---DLIRSKNFLLLMDSAL----------EGHFSNDEGTELV 218
++ I + L DL+ S + M + S + +
Sbjct: 248 WEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMA 307
Query: 219 RLASRCLQSEARERPNAKSLVISLMSLQKE 248
++ C + R A + +L L ++
Sbjct: 308 KIMRECWYANGAARLTALRIKKTLSQLSQQ 337
|
| >3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} Length = 337 | Back alignment and structure |
|---|
Score = 56.7 bits (137), Expect = 4e-09
Identities = 41/273 (15%), Positives = 90/273 (32%), Gaps = 48/273 (17%)
Query: 21 VLESSDLGETLNLEEAKAVGNLRSERLANLIGCCYEADER----LLVAEFMPNETLAKHL 76
V +++ E +R E + I + L+ ++ N +L +L
Sbjct: 67 VFFTTEEASWFRETEIYQTVLMRHENILGFIAADIKGTGSWTQLYLITDYHENGSLYDYL 126
Query: 77 FHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYH-------DLNAYRILFDKDGNPRL 129
++ + L++A L + ++ + DL + IL K+G +
Sbjct: 127 ---KSTTLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCI 183
Query: 130 SSFGL----MKNSRDGKSYSTNLAFTPPEYM-------RTGRVTPESV----VYSFGTML 174
+ GL + ++ + T YM R +S +YSFG +L
Sbjct: 184 ADLGLAVKFISDTNEVDIPPNTRVGTKR-YMPPEVLDESLNRNHFQSYIMADMYSFGLIL 242
Query: 175 LDLLSGKHIPPSHALDLIRSKNFLLLMDSALE----------------GHFSNDEGT-EL 217
++ + + + L+ D + E +S+DE ++
Sbjct: 243 WEVARRC-VSGGIVEEYQLPYHDLVPSDPSYEDMREIVCIKKLRPSFPNRWSSDECLRQM 301
Query: 218 VRLASRCLQSEARERPNAKSLVISLMSLQKEAE 250
+L + C R A + +L + + +
Sbjct: 302 GKLMTECWAHNPASRLTALRVKKTLAKMSESQD 334
|
| >4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A* Length = 289 | Back alignment and structure |
|---|
Score = 55.8 bits (135), Expect = 7e-09
Identities = 59/245 (24%), Positives = 90/245 (36%), Gaps = 34/245 (13%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQPMKWAMRLRV 92
E A + L + L G C DE +LV EF+ +L +L + +L V
Sbjct: 60 FEAASMMSKLSHKHLVLNYGVCVCGDENILVQEFVKFGSLDTYL-KKNKNCINILWKLEV 118
Query: 93 ALYLAQALEYCSSKGRALYH-DLNAYRIL-----FDKDGNPR---LSSFGLMKNSRDGKS 143
A LA A+ + L H ++ A IL K GNP LS G+
Sbjct: 119 AKQLAAAMHFLEENT--LIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKDI 176
Query: 144 YSTNLAFTPPEYMRTGRV-TPESVVYSFGTMLLDLLSGKHIP-----PSHALDLIRSKNF 197
+ + PPE + + + +SFGT L ++ SG P L ++
Sbjct: 177 LQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDSQRKLQFYEDRHQ 236
Query: 198 LLLMDSALEGHFSNDEGTELVRLASRCLQSEARERPNAKSLVISLMSLQKEAEQVPSYVL 257
L + EL L + C+ E RP+ ++++ L SL P V
Sbjct: 237 L-----------PAPKAAELANLINNCMDYEPDHRPSFRAIIRDLNSL-----FTPDLVP 280
Query: 258 LGIQH 262
G H
Sbjct: 281 RGSHH 285
|
| >2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae} Length = 111 | Back alignment and structure |
|---|
Score = 52.3 bits (126), Expect = 8e-09
Identities = 15/102 (14%), Positives = 38/102 (37%), Gaps = 8/102 (7%)
Query: 316 MQETLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTV---YARRCLSYLMNDMPQE 372
M + K+ G++ F+ + A+ CY Q I P Y+ + ++ + +
Sbjct: 1 MSQFEKQKEQGNSLFKQGLYREAVHCYDQLIT----AQPQNPVGYSNKAMALIKLGEYTQ 56
Query: 373 ALGDAMQAQVVSPDWPTALYLQAACLFSLGMENDARETLKDG 414
A+ Q + +++ + L + A +++
Sbjct: 57 AIQMCQQGLRYTSTAEHV-AIRSKLQYRLELAQGAVGSVQIP 97
|
| >3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 3q32_A* 3rvg_A* 3tjc_A* 3tjd_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* 3io7_A* 3kck_A* 3jy9_A* Length = 295 | Back alignment and structure |
|---|
Score = 55.4 bits (134), Expect = 9e-09
Identities = 46/245 (18%), Positives = 92/245 (37%), Gaps = 36/245 (14%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADER--LLVAEFMPNETLAKHLFHWETQPMKWAMRL 90
E + + +L+ + + G CY A R L+ E++P +L +L + + + L
Sbjct: 59 EREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER-IDHIKLL 117
Query: 91 RVALYLAQALEYCSSKGRALYH-DLNAYRILFDKDGNPRLSSFGLMKNSRDGKSY---ST 146
+ + + +EY +K H DL IL + + ++ FGL K K +
Sbjct: 118 QYTSQICKGMEYLGTKR--YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKE 175
Query: 147 NLAF----TPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMD 202
PE + + + S V+SFG +L +L + S F+ ++
Sbjct: 176 PGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKS------PPAEFMRMIG 229
Query: 203 SALEGHFSNDEGTELV----RLA-------------SRCLQSEARERPNAKSLVISLMSL 245
+ +G EL+ RL + C + +RP+ + L + + +
Sbjct: 230 NDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQI 289
Query: 246 QKEAE 250
+
Sbjct: 290 RDNMA 294
|
| >1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ... Length = 279 | Back alignment and structure |
|---|
Score = 54.9 bits (133), Expect = 1e-08
Identities = 41/174 (23%), Positives = 74/174 (42%), Gaps = 14/174 (8%)
Query: 17 LKSSVLESSDLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHL 76
LK + L EA + L+ +RL L + + ++ E+M N +L L
Sbjct: 45 LKQGSMSPDAF-----LAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDFL 98
Query: 77 FHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYH-DLNAYRILFDKDGNPRLSSFGLM 135
+ L +A +A+ + + + H DL A IL + +++ FGL
Sbjct: 99 KTPSGIKLTINKLLDMAAQIAEGMAFIEERN--YIHRDLRAANILVSDTLSCKIADFGLA 156
Query: 136 KNSRDGKSYSTNLA-----FTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIP 184
+ D + + A +T PE + G T +S V+SFG +L ++++ IP
Sbjct: 157 RLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIP 210
|
| >2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A Length = 450 | Back alignment and structure |
|---|
Score = 55.5 bits (134), Expect = 1e-08
Identities = 17/113 (15%), Positives = 39/113 (34%), Gaps = 6/113 (5%)
Query: 315 QMQETLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEAL 374
+ E + AF + D++ AI + ++ + R ++ P++A+
Sbjct: 139 KSDEMQRLRSQALNAFGSGDYTAAIAFLDKILEVCVW-DAELRELRAECFIKEGEPRKAI 197
Query: 375 GDAMQAQVVSPDWPTALYLQAACLFSLGMENDARETLK-----DGTNLEAKKN 422
D A + D A Y + + LG + ++ D + +
Sbjct: 198 SDLKAASKLKNDNTEAFYKISTLYYQLGDHELSLSEVRECLKLDQDHKRCFAH 250
|
| >2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A Length = 450 | Back alignment and structure |
|---|
Score = 50.1 bits (120), Expect = 8e-07
Identities = 20/103 (19%), Positives = 38/103 (36%), Gaps = 6/103 (5%)
Query: 326 GDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSP 385
G A + A+ + +DG + Y RR +L + AL D + +
Sbjct: 33 GKKLLAAGQLADALSQFHAAVDGDPD-NYIAYYRRATVFLAMGKSKAALPDLTKVIQLKM 91
Query: 386 DWPTALYLQAACLFSLGMENDARETLK-----DGTNLEAKKNK 423
D+ A + L G ++A + K + + E K+ +
Sbjct: 92 DFTAARLQRGHLLLKQGKLDEAEDDFKKVLKSNPSENEEKEAQ 134
|
| >2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A Length = 450 | Back alignment and structure |
|---|
Score = 45.4 bits (108), Expect = 2e-05
Identities = 16/101 (15%), Positives = 36/101 (35%), Gaps = 3/101 (2%)
Query: 315 QMQETLNSKKHGDTAFRAKDFSTAIDCYTQFID---GGTMVSPTVYARRCLSYLMNDMPQ 371
Q+++ + + R ++ A Y + + R C + ++ P
Sbjct: 253 QVKKLNKLIESAEELIRDGRYTDATSKYESVMKTEPSIAEYTVRSKERICHCFSKDEKPV 312
Query: 372 EALGDAMQAQVVSPDWPTALYLQAACLFSLGMENDARETLK 412
EA+ + + PD AL +A M ++A + +
Sbjct: 313 EAIRVCSEVLQMEPDNVNALKDRAEAYLIEEMYDEAIQDYE 353
|
| >3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} PDB: 3sxr_A* Length = 268 | Back alignment and structure |
|---|
Score = 54.5 bits (132), Expect = 1e-08
Identities = 33/158 (20%), Positives = 70/158 (44%), Gaps = 9/158 (5%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQPMKWAMRLRV 92
+EA+ + L +L G C + +V E++ N L +L + ++ + L +
Sbjct: 51 FQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTEYISNGCLLNYL-RSHGKGLEPSQLLEM 109
Query: 93 ALYLAQALEYCSSKGRALYH-DLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLA-- 149
+ + + + S H DL A L D+D ++S FG+ + D + S+
Sbjct: 110 CYDVCEGMAFLESHQ--FIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSSVGTKF 167
Query: 150 ---FTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIP 184
++ PE + + +S V++FG ++ ++ S +P
Sbjct: 168 PVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMP 205
|
| >3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* Length = 267 | Back alignment and structure |
|---|
Score = 53.7 bits (130), Expect = 2e-08
Identities = 41/174 (23%), Positives = 73/174 (41%), Gaps = 14/174 (8%)
Query: 17 LKSSVLESSDLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHL 76
++ + D +EEA+ + L +L L G C E LV EFM + L+ +L
Sbjct: 40 IREGAMSEEDF-----IEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTEFMEHGCLSDYL 94
Query: 77 FHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYH-DLNAYRILFDKDGNPRLSSFGLM 135
+ L + L + + + Y + H DL A L ++ ++S FG+
Sbjct: 95 RTQRGLFAAETL-LGMCLDVCEGMAYLEEAC--VIHRDLAARNCLVGENQVIKVSDFGMT 151
Query: 136 KNSRDGKSYSTNLA-----FTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIP 184
+ D + S+ + PE R + +S V+SFG ++ ++ S IP
Sbjct: 152 RFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIP 205
|
| >4apc_A Serine/threonine-protein kinase NEK1; transferase; 2.10A {Homo sapiens} Length = 350 | Back alignment and structure |
|---|
Score = 53.9 bits (130), Expect = 3e-08
Identities = 46/242 (19%), Positives = 90/242 (37%), Gaps = 32/242 (13%)
Query: 54 CYEADERL-LVAEFMPNETLAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYH 112
+E + L +V ++ L K + + + L + + AL++ + + L+
Sbjct: 91 SFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHDR-KILHR 149
Query: 113 DLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLAFTP----PEYMRTGRVTPESVVY 168
D+ + I KDG +L FG+ + + TP PE +S ++
Sbjct: 150 DIKSQNIFLTKDGTVQLGDFGIARVLNSTVELARACIGTPYYLSPEICENKPYNNKSDIW 209
Query: 169 SFGTMLLDLLSGKHIPPSHALDL------IRSKNFLLLMDSALEGHFSNDEGTELVRLAS 222
+ G +L +L + K A + I S +F + H+S +L L S
Sbjct: 210 ALGCVLYELCTLK--HAFEAGSMKNLVLKIISGSF-----PPVSLHYSY----DLRSLVS 258
Query: 223 RCLQSEARERPNAKSL---------VISLMSLQKEAEQVPSYVLLGIQHETAPSTKPLSL 273
+ + R+RP+ S+ + +S Q AE+ + P+ +P S
Sbjct: 259 QLFKRNPRDRPSVNSILEKGFIAKRIEKFLSPQLIAEEFCLKTFSKFGSQPIPAKRPASG 318
Query: 274 TP 275
Sbjct: 319 QN 320
|
| >3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus} Length = 359 | Back alignment and structure |
|---|
Score = 53.4 bits (129), Expect = 5e-08
Identities = 21/113 (18%), Positives = 40/113 (35%), Gaps = 6/113 (5%)
Query: 315 QMQETLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEAL 374
+ E + AF D++ AI + ++ + R ++ P++A+
Sbjct: 116 KADEMQRLRSQALDAFDGADYTAAITFLDKILEVCVW-DAELRELRAECFIKEGEPRKAI 174
Query: 375 GDAMQAQVVSPDWPTALYLQAACLFSLGMENDA----RETLK-DGTNLEAKKN 422
D A + D A Y + + LG + RE LK D + +
Sbjct: 175 SDLKAASKLKSDNTEAFYKISTLYYQLGDHELSLSEVRECLKLDQDHKRCFAH 227
|
| >3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus} Length = 359 | Back alignment and structure |
|---|
Score = 46.9 bits (112), Expect = 6e-06
Identities = 16/117 (13%), Positives = 41/117 (35%), Gaps = 8/117 (6%)
Query: 315 QMQETLNSKKHGDTAFRAKDFSTAIDCYTQFID---GGTMVSPTVYARRCLSYLMNDMPQ 371
Q+++ + + R ++ A Y + + R C + ++ P
Sbjct: 230 QVKKLNKLIESAEELIRDGRYTDATSKYESVMKTEPSVAEYTVRSKERICHCFSKDEKPV 289
Query: 372 EALGDAMQAQVVSPDWPTALYLQAACLFSLGMENDARETLK-----DGTNLEAKKNK 423
EA+ + + PD AL +A M ++A + + + + + ++
Sbjct: 290 EAIRICSEVLQMEPDNVNALKDRAEAYLIEEMYDEAIQDYEAAQEHNENDQQIREGL 346
|
| >3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus} Length = 359 | Back alignment and structure |
|---|
Score = 45.0 bits (107), Expect = 3e-05
Identities = 21/106 (19%), Positives = 38/106 (35%), Gaps = 12/106 (11%)
Query: 326 GDTAFRAKDFSTAIDCYTQFIDGGTMVSPT---VYARRCLSYLMNDMPQEALGDAMQAQV 382
G A + A+ + +DG P Y RR +L + AL D +
Sbjct: 10 GKKLLAAGQLADALSQFHAAVDG----DPDNYIAYYRRATVFLAMGKSKAALPDLTKVIA 65
Query: 383 VSPDWPTALYLQAACLFSLGMENDARETLK-----DGTNLEAKKNK 423
+ D+ A + L G ++A + K + + E K+ +
Sbjct: 66 LKMDFTAARLQRGHLLLKQGKLDEAEDDFKKVLKSNPSEQEEKEAE 111
|
| >4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 3eyg_A* 3eyh_A* Length = 302 | Back alignment and structure |
|---|
Score = 52.7 bits (127), Expect = 6e-08
Identities = 48/241 (19%), Positives = 90/241 (37%), Gaps = 39/241 (16%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADER--LLVAEFMPNETLAKHLFHWETQPMKWAMRL 90
+E + + NL E + G C E L+ EF+P+ +L ++L + + + +L
Sbjct: 71 KKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNK-INLKQQL 129
Query: 91 RVALYLAQALEYCSSKGRALYH-DLNAYRILFDKDGNPRLSSFGLMKNSRDGKSY---ST 146
+ A+ + + ++Y S+ H DL A +L + + ++ FGL K K Y
Sbjct: 130 KYAVQICKGMDYLGSRQ--YVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEYYTVKD 187
Query: 147 NLAF----TPPEYMRTGRVTPESVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKNFLLLM 201
+ PE + + S V+SFG L +LL+ AL L M
Sbjct: 188 DRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTHGQM 247
Query: 202 DSALEGHFSNDEGTELV----RLAS-------------RCLQSEARERPNAKSLVISLMS 244
+ + RL +C + + R + ++L+ +
Sbjct: 248 --------TVTRLVNTLKEGKRLPCPPNCPDEVYQLMRKCWEFQPSNRTSFQNLIEGFEA 299
Query: 245 L 245
L
Sbjct: 300 L 300
|
| >1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A Length = 303 | Back alignment and structure |
|---|
Score = 52.7 bits (127), Expect = 8e-08
Identities = 30/163 (18%), Positives = 59/163 (36%), Gaps = 26/163 (15%)
Query: 96 LAQALEYCSSKGRALYH-DLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLAFTP-- 152
+ +AL Y S+G + H DL I D+ N ++ FGL KN +
Sbjct: 125 ILEALSYIHSQG--IIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPG 182
Query: 153 -----------PEYM------RTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSK 195
Y+ TG + +YS G + +++ P S ++ +
Sbjct: 183 SSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY----PFSTGMERVNIL 238
Query: 196 NFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERPNAKSL 238
L + F +++ ++ + + +RP A++L
Sbjct: 239 KKLRSVSIEFPPDFDDNKMKVEKKIIRLLIDHDPNKRPGARTL 281
|
| >3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A* Length = 301 | Back alignment and structure |
|---|
Score = 52.4 bits (126), Expect = 8e-08
Identities = 39/267 (14%), Positives = 82/267 (30%), Gaps = 46/267 (17%)
Query: 21 VLESSDLGETLNLEEAKAVGNLRSERLANLIGCC----YEADERLLVAEFMPNETLAKHL 76
+ S D E LR E + I + + + L+ + +L +L
Sbjct: 38 IFSSRDEKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYL 97
Query: 77 FHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYH-------DLNAYRILFDKDGNPRL 129
+ + LR+ L +A L + + DL + IL K+G +
Sbjct: 98 ---QLTTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCI 154
Query: 130 SSFGL----MKNSRDGKSYSTNLAFTP----PEYMRTGRVTPESV-------VYSFGTML 174
+ GL +++ + T PE + + + +++FG +L
Sbjct: 155 ADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLD-ETIQVDCFDSYKRVDIWAFGLVL 213
Query: 175 LDLLSGKH---IPPSHAL---DLIRSKNFLLLMDSA---------LEGHFSNDEGT-ELV 218
++ I + D++ + M + + +D L
Sbjct: 214 WEVARRMVSNGIVEDYKPPFYDVVPNDPSFEDMRKVVCVDQQRPNIPNRWFSDPTLTSLA 273
Query: 219 RLASRCLQSEARERPNAKSLVISLMSL 245
+L C R A + +L +
Sbjct: 274 KLMKECWYQNPSARLTALRIKKTLTKI 300
|
| >3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A Length = 283 | Back alignment and structure |
|---|
Score = 52.2 bits (126), Expect = 8e-08
Identities = 42/158 (26%), Positives = 77/158 (48%), Gaps = 9/158 (5%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQPMKWAMRLRV 92
+EEAK + NL E+L L G C + ++ E+M N L +L + + L +
Sbjct: 67 IEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQL-LEM 125
Query: 93 ALYLAQALEYCSSKGRALYH-DLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLA-- 149
+ +A+EY SK H DL A L + G ++S FGL + D + S+ +
Sbjct: 126 CKDVCEAMEYLESKQ--FLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKF 183
Query: 150 ---FTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIP 184
++PPE + + + +S +++FG ++ ++ S +P
Sbjct: 184 PVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMP 221
|
| >2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A* Length = 656 | Back alignment and structure |
|---|
Score = 52.9 bits (127), Expect = 1e-07
Identities = 47/229 (20%), Positives = 81/229 (35%), Gaps = 24/229 (10%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQPMKWAMRLRV 92
L+EA + + LIG + ++ E L L + + A +
Sbjct: 439 LQEALTMRQFDHPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQVRKFS-LDLASLILY 496
Query: 93 ALYLAQALEYCSSKGRALYH-DLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLA-- 149
A L+ AL Y SK H D+ A +L + +L FGL + D Y +
Sbjct: 497 AYQLSTALAYLESKR--FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKL 554
Query: 150 ---FTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIP-----PSHALDLIRSKNFLLLM 201
+ PE + R T S V+ FG + ++L P + + I + L +
Sbjct: 555 PIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMP 614
Query: 202 DSALEGHFSNDEGTELVRLASRCLQSEARERPNAKSLVISLMSLQKEAE 250
+ L L ++C + RP L L ++ +E +
Sbjct: 615 PNCPP---------TLYSLMTKCWAYDPSRRPRFTELKAQLSTILEEEK 654
|
| >2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ... Length = 373 | Back alignment and structure |
|---|
Score = 52.4 bits (126), Expect = 1e-07
Identities = 40/161 (24%), Positives = 68/161 (42%), Gaps = 13/161 (8%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQPMKWAMRLRV 92
L EA +G + L G ++ ++V E+M N +L L + Q + +
Sbjct: 94 LGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQF-TVIQLVGM 152
Query: 93 ALYLAQALEYCSSKGRALY-H-DLNAYRILFDKDGNPRLSSFGLMKNSRDGKSY---STN 147
+A ++Y S G Y H DL A IL + + ++S FGL + D +
Sbjct: 153 LRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYTTRG 209
Query: 148 LAF----TPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIP 184
T PE + + T S V+S+G +L +++S P
Sbjct: 210 GKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 250
|
| >3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens} Length = 325 | Back alignment and structure |
|---|
Score = 51.5 bits (124), Expect = 2e-07
Identities = 37/148 (25%), Positives = 57/148 (38%), Gaps = 13/148 (8%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQPMKWAMRLRV 92
L EA +G + L G ++V E+M N +L L + Q + +
Sbjct: 98 LSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQF-TIMQLVGM 156
Query: 93 ALYLAQALEYCSSKGRALY-H-DLNAYRILFDKDGNPRLSSFGLMKNSRDGKSY---STN 147
+ + Y S G Y H DL A +L D + ++S FGL + D +T
Sbjct: 157 LRGVGAGMRYLSDLG---YVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYTTTG 213
Query: 148 LAF----TPPEYMRTGRVTPESVVYSFG 171
T PE + + S V+SFG
Sbjct: 214 GKIPIRWTAPEAIAFRTFSSASDVWSFG 241
|
| >3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens} Length = 311 | Back alignment and structure |
|---|
Score = 51.2 bits (123), Expect = 2e-07
Identities = 33/166 (19%), Positives = 55/166 (33%), Gaps = 39/166 (23%)
Query: 91 RVALYLAQ---ALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKN-SRDGKSYS- 145
+V YL AL + S+G ++ D+ I G +L FGL+ G
Sbjct: 158 QVWGYLRDTLLALAHLHSQG-LVHLDVKPANIFLGPRGRCKLGDFGLLVELGTAGAGEVQ 216
Query: 146 --TNLAFTPPEYMRTGRVTPE---------SVVYSFGTMLLDLLSGKHIPPSHALDL--I 192
P YM PE + V+S G +L++ P +
Sbjct: 217 EGD------PRYM-----APELLQGSYGTAADVFSLGLTILEVACNME-LPHGGEGWQQL 264
Query: 193 RSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERPNAKSL 238
R + S+ EL + L+ + + R A++L
Sbjct: 265 RQGY----LPPEFTAGLSS----ELRSVLVMMLEPDPKLRATAEAL 302
|
| >1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 333 | Back alignment and structure |
|---|
Score = 51.2 bits (123), Expect = 3e-07
Identities = 33/147 (22%), Positives = 63/147 (42%), Gaps = 11/147 (7%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQPMKWAMRLRV 92
L EA +G + L G + +++ E+M N L K L + + + + +
Sbjct: 94 LGEAGIMGQFSHHNIIRLEGVISKYKPMMIITEYMENGALDKFLREKDGEFSVLQL-VGM 152
Query: 93 ALYLAQALEYCSSKGRALYH-DLNAYRILFDKDGNPRLSSFGL---MKNSRDGKSYSTNL 148
+A ++Y ++ H DL A IL + + ++S FGL +++ + ++
Sbjct: 153 LRGIAAGMKYLANMN--YVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGG 210
Query: 149 AF----TPPEYMRTGRVTPESVVYSFG 171
T PE + + T S V+SFG
Sbjct: 211 KIPIRWTAPEAISYRKFTSASDVWSFG 237
|
| >3pvu_A Beta-adrenergic receptor kinase 1; transferase, serine/threonine-protein kinase, ATP-binding, I membrane; HET: QRW; 2.48A {Bos taurus} PDB: 3psc_A* 3pvw_A* 1omw_A 1ym7_A 2bcj_A* 3cik_A 3krw_A* 3krx_A* 1bak_A Length = 695 | Back alignment and structure |
|---|
Score = 51.8 bits (124), Expect = 3e-07
Identities = 34/151 (22%), Positives = 52/151 (34%), Gaps = 37/151 (24%)
Query: 53 CCYEADERL-LVAEFMPNETLAKHLFHWETQPMKWAMRLRVALYLAQ---ALEYCSSKGR 108
+ ++L + + M L HL + Y A+ LE+ ++
Sbjct: 259 YAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEA-----DMRFYAAEIILGLEHMHNRF- 312
Query: 109 ALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYS---TNLAFTPPEYMRTGRVTPES 165
+Y DL IL D+ G+ R+S GL + K ++ T YM PE
Sbjct: 313 VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVGT------HGYM-----APEV 361
Query: 166 VVY-----------SFGTMLLDLLSGKHIPP 185
+ S G ML LL G P
Sbjct: 362 LQKGVAYDSSADWFSLGCMLFKLLRGH--SP 390
|
| >2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens} Length = 613 | Back alignment and structure |
|---|
Score = 51.9 bits (124), Expect = 3e-07
Identities = 38/160 (23%), Positives = 66/160 (41%), Gaps = 12/160 (7%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQPMKWAMRLRV 92
+ EA+ + L + + LIG C +A+ +LV E L K L + + + +
Sbjct: 384 MREAQIMHQLDNPYIVRLIGVC-QAEALMLVMEMAGGGPLHKFLVGKREE-IPVSNVAEL 441
Query: 93 ALYLAQALEYCSSKGRALYH-DLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTN---- 147
++ ++Y K H +L A +L ++S FGL K SY T
Sbjct: 442 LHQVSMGMKYLEEKN--FVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAG 499
Query: 148 ---LAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIP 184
L + PE + + + S V+S+G + + LS P
Sbjct: 500 KWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKP 539
|
| >1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ... Length = 322 | Back alignment and structure |
|---|
Score = 51.1 bits (123), Expect = 3e-07
Identities = 43/244 (17%), Positives = 87/244 (35%), Gaps = 31/244 (12%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHL--------FHWETQPM 84
L EA + + L+G + L++ E M L +L + P
Sbjct: 76 LNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPP 135
Query: 85 KWAMRLRVALYLAQALEYCSSKGRALYH-DLNAYRILFDKDGNPRLSSFGLMKNSRDGKS 143
+ +++A +A + Y ++ H DL A + +D ++ FG+ ++ +
Sbjct: 136 SLSKMIQMAGEIADGMAYLNANK--FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDY 193
Query: 144 Y--STNLAF----TPPEYMRTGRVTPESVVYSFGTMLLDLLS-GKH----IPPSHALDLI 192
Y PE ++ G T S V+SFG +L ++ + + + L +
Sbjct: 194 YRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFV 253
Query: 193 RSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERPNAKSLVISLMSLQKEAEQV 252
L D+ + L L C Q + RP+ ++ S+ + +
Sbjct: 254 MEGGLLDKPDNCPD---------MLFELMRMCWQYNPKMRPSFLEIISSIKEEMEPGFRE 304
Query: 253 PSYV 256
S+
Sbjct: 305 VSFY 308
|
| >3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B Length = 543 | Back alignment and structure |
|---|
Score = 51.3 bits (123), Expect = 3e-07
Identities = 34/147 (23%), Positives = 59/147 (40%), Gaps = 24/147 (16%)
Query: 53 CCYEADERL-LVAEFMPNETLAKHLFHWETQPMKWAMRLRVALYLAQ---ALEYCSSKGR 108
+E L LV M + H+++ + + R Y AQ LE+ +
Sbjct: 252 YAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEP-RAIFYTAQIVSGLEHLHQRN- 309
Query: 109 ALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLAFTPPEYMRTGRVTPESVVY 168
+Y DL +L D DGN R+S GL + G++ + A T P +M PE ++
Sbjct: 310 IIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGT-PGFM-----APELLLG 363
Query: 169 ----------SFGTMLLDLLSGKHIPP 185
+ G L ++++ + P
Sbjct: 364 EEYDFSVDYFALGVTLYEMIAAR--GP 388
|
| >3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 3pjc_A* 1yvj_A* Length = 327 | Back alignment and structure |
|---|
Score = 50.8 bits (122), Expect = 4e-07
Identities = 55/281 (19%), Positives = 93/281 (33%), Gaps = 66/281 (23%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADER--LLVAEFMPNETL------------AKHLFH 78
E + + L S+ + G Y + LV E++P+ L A L
Sbjct: 72 QREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLL 131
Query: 79 WETQPMKWAMRLRVALYLAQALEYCSSKGRALYH-DLNAYRILFDKDGNPRLSSFGLMKN 137
+ +Q + + +EY S+ H DL A IL + + + +++ FGL K
Sbjct: 132 YSSQ-------------ICKGMEYLGSRR--CVHRDLAARNILVESEAHVKIADFGLAKL 176
Query: 138 SRDGKSY---STNLAF----TPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALD 190
K Y PE + + +S V+SFG +L +L + S + +
Sbjct: 177 LPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAE 236
Query: 191 LIRSKNFLLLMDSALEGHFSNDEGTELV----RLA-------------SRCLQSEARERP 233
+R M + EL+ RL C ++RP
Sbjct: 237 FLR-------MMGCERDVPALSRLLELLEEGQRLPAPPACPAEVHELMKLCWAPSPQDRP 289
Query: 234 NAKSLVISLMSLQKEAEQVPSYVLLGIQHETAPSTKPLSLT 274
+ +L L L + H P K SL+
Sbjct: 290 SFSALGPQLDMLWSGSR--GCETHAFTAH---PEGKHHSLS 325
|
| >1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A* Length = 291 | Back alignment and structure |
|---|
Score = 50.3 bits (121), Expect = 4e-07
Identities = 37/147 (25%), Positives = 65/147 (44%), Gaps = 13/147 (8%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQPMKWAMRLRV 92
L EA + L + + +IG C EA+ +LV E L K+L + + +K + +
Sbjct: 66 LAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQ--QNRHVKDKNIIEL 122
Query: 93 ALYLAQALEYCSSKGRALYH-DLNAYRILFDKDGNPRLSSFGLMKNSRDGKSY---STNL 148
++ ++Y H DL A +L ++S FGL K R ++Y T+
Sbjct: 123 VHQVSMGMKYLEESN--FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHG 180
Query: 149 AF----TPPEYMRTGRVTPESVVYSFG 171
+ PE + + + +S V+SFG
Sbjct: 181 KWPVKWYAPECINYYKFSSKSDVWSFG 207
|
| >3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens} Length = 327 | Back alignment and structure |
|---|
Score = 50.7 bits (122), Expect = 4e-07
Identities = 29/146 (19%), Positives = 57/146 (39%), Gaps = 11/146 (7%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQPMKWAMRLRV 92
L+EA + ++ + + L+G C L+ + MP L ++ + L
Sbjct: 65 LDEAYVMASVDNPHVCRLLGIC-LTSTVQLITQLMPFGCLLDYV-REHKDNIGSQYLLNW 122
Query: 93 ALYLAQALEYCSSKGRALYH-DLNAYRILFDKDGNPRLSSFGLMKNSRDGKSY--STNLA 149
+ +A+ + Y + L H DL A +L + +++ FGL K + +
Sbjct: 123 CVQIAKGMNYLEDRR--LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK 180
Query: 150 F----TPPEYMRTGRVTPESVVYSFG 171
E + T +S V+S+G
Sbjct: 181 VPIKWMALESILHRIYTHQSDVWSYG 206
|
| >4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A* Length = 336 | Back alignment and structure |
|---|
Score = 50.5 bits (121), Expect = 4e-07
Identities = 45/231 (19%), Positives = 77/231 (33%), Gaps = 38/231 (16%)
Query: 29 ETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHW----ETQPM 84
E +EE A L S R+ L G E + E + +L + + E +
Sbjct: 94 EVFRVEELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLIKQMGCLPEDR-- 151
Query: 85 KWAMRLRVALYLAQ---ALEYCSSKGRALYHDLNAYRILFDKDGNP-RLSSFGLMKNSRD 140
YL Q LEY ++ L+ D+ A +L DG+ L FG +
Sbjct: 152 -------ALYYLGQALEGLEYLHTRR-ILHGDVKADNVLLSSDGSRAALCDFGHALCLQP 203
Query: 141 GKSYSTNLAF-----TP----PEYMRTGRVTPESVVYSFGTMLLDLLSGKH----IPPSH 187
+ L T PE + + ++S M+L +L+G H
Sbjct: 204 DGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGP 263
Query: 188 ALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERPNAKSL 238
I S+ + + + + ++ L+ E R +A L
Sbjct: 264 LCLKIASEPPPIR---EIPPSCA-PLTAQAIQ---EGLRKEPVHRASAMEL 307
|
| >2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A* Length = 576 | Back alignment and structure |
|---|
Score = 50.9 bits (122), Expect = 4e-07
Identities = 37/149 (24%), Positives = 56/149 (37%), Gaps = 31/149 (20%)
Query: 53 CCYEADERL-LVAEFMPNETLAKHLFHWETQPMKWAMRLRVALYLAQ---ALEYCSSKGR 108
YE + L LV M L H++H A R Y A+ LE +
Sbjct: 251 YAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEA---RAVFYAAEICCGLEDLHRER- 306
Query: 109 ALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLAF--TPPEYMRTGRVTPESV 166
+Y DL IL D G+ R+S GL + +G++ T YM PE V
Sbjct: 307 IVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKG---RVGT-VGYM-----APEVV 357
Query: 167 VY----------SFGTMLLDLLSGKHIPP 185
+ G +L ++++G+ P
Sbjct: 358 KNERYTFSPDWWALGCLLYEMIAGQ--SP 384
|
| >2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B* Length = 284 | Back alignment and structure |
|---|
Score = 50.0 bits (120), Expect = 5e-07
Identities = 36/182 (19%), Positives = 69/182 (37%), Gaps = 18/182 (9%)
Query: 62 LVAEFMPNETLAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYH-DLNAYRIL 120
+ EF TL + + + + + L + + + ++Y SK L + DL I
Sbjct: 97 IQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSKK--LINRDLKPSNIF 154
Query: 121 FDKDGNPRLSSFGLMKNSRDGKSYSTNLAFTP----PEYMRTGRVTPESVVYSFGTMLLD 176
++ FGL+ + ++ + + T PE + + E +Y+ G +L +
Sbjct: 155 LVDTKQVKIGDFGLVTSLKNDGKRTRSKG-TLRYMSPEQISSQDYGKEVDLYALGLILAE 213
Query: 177 LLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERPNAK 236
LL A + SK F L D + F + L + L + +RPN
Sbjct: 214 LLH----VCDTAFE--TSKFFTDLRDGIISDIFDK----KEKTLLQKLLSKKPEDRPNTS 263
Query: 237 SL 238
+
Sbjct: 264 EI 265
|
| >3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus} Length = 323 | Back alignment and structure |
|---|
Score = 50.0 bits (120), Expect = 6e-07
Identities = 48/262 (18%), Positives = 92/262 (35%), Gaps = 44/262 (16%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADER------LLVAEFMPN----ETLAKHLFHWETQ 82
L EA + +A L+G + + +++ FM + L
Sbjct: 73 LREAACMKEFDHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPF 132
Query: 83 PMKWAMRLRVALYLAQALEYCSSKGRALYH-DLNAYRILFDKDGNPRLSSFGLMKNSRD- 140
+ +R + +A +EY SS+ H DL A + +D ++ FGL SR
Sbjct: 133 NLPLQTLVRFMVDIACGMEYLSSRN--FIHRDLAARNCMLAEDMTVCVADFGL---SRKI 187
Query: 141 -GKSY---STNLAF----TPPEYMRTGRVTPESVVYSFGTMLLDLLS-GK----HIPPSH 187
Y E + T S V++FG + ++++ G+ I +
Sbjct: 188 YSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENAE 247
Query: 188 ALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERPNAKSLVISLMSL-- 245
+ + N L +E E+ L +C ++ ++RP+ L + L ++
Sbjct: 248 IYNYLIGGNRLKQPPECME---------EVYDLMYQCWSADPKQRPSFTCLRMELENILG 298
Query: 246 ---QKEAEQVPSYVLLGIQHET 264
Q P Y+ + H
Sbjct: 299 HLSVLSTSQDPLYINIERAHHH 320
|
| >1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A* Length = 281 | Back alignment and structure |
|---|
Score = 49.9 bits (120), Expect = 6e-07
Identities = 37/158 (23%), Positives = 60/158 (37%), Gaps = 10/158 (6%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQPMKWAMRLRV 92
L+EA + + LIG E + ++ E L L + ++ +
Sbjct: 64 LQEALTMRQFDHPHIVKLIGVITE-NPVWIIMELCTLGELRSFLQVRKYSLDLASL-ILY 121
Query: 93 ALYLAQALEYCSSKGRALYH-DLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLA-- 149
A L+ AL Y SK H D+ A +L + +L FGL + D Y +
Sbjct: 122 AYQLSTALAYLESKR--FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKL 179
Query: 150 ---FTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIP 184
+ PE + R T S V+ FG + ++L P
Sbjct: 180 PIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKP 217
|
| >3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A* Length = 325 | Back alignment and structure |
|---|
Score = 49.6 bits (119), Expect = 7e-07
Identities = 28/146 (19%), Positives = 58/146 (39%), Gaps = 11/146 (7%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQPMKWAMRLRV 92
+ A+G+L + L+G C LV +++P +L H+ + + L
Sbjct: 63 TDHMLAIGSLDHAHIVRLLGLCPG-SSLQLVTQYLPLGSLLDHV-RQHRGALGPQLLLNW 120
Query: 93 ALYLAQALEYCSSKGRALYH-DLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTN---- 147
+ +A+ + Y G + H +L A +L +++ FG+
Sbjct: 121 GVQIAKGMYYLEEHG--MVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAK 178
Query: 148 --LAFTPPEYMRTGRVTPESVVYSFG 171
+ + E + G+ T +S V+S+G
Sbjct: 179 TPIKWMALESIHFGKYTHQSDVWSYG 204
|
| >3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens} Length = 365 | Back alignment and structure |
|---|
Score = 50.0 bits (119), Expect = 7e-07
Identities = 28/248 (11%), Positives = 62/248 (25%), Gaps = 40/248 (16%)
Query: 21 VLESSDLGETLNLEEAKAVGNLRSERLANLIGCCY---EADERLLVAEFMPNETLAKHLF 77
V + ++ E + L+ + + +LV E TL +
Sbjct: 102 VQKPANPWEFYIGTQLMER--LKPSMQHMFMKFYSAHLFQNGSVLVGELYSYGTLLNAIN 159
Query: 78 HWETQPMKWAMRLRVALYLAQ---ALEYCSSKGRA----------LYHDLNAYRILFDKD 124
++ P K + V + + +E L + D
Sbjct: 160 LYKNTPEKVMPQGLVISFAMRMLYMIEQVHDCEIIHGDIKPDNFILGNGFLEQDDEDDLS 219
Query: 125 GNPRLSSFGLMKNSRDGKSYSTNLAFTP----PEY----MRTGRVTPESV-VYSFGTMLL 175
L G S D K + FT + M + + + + +
Sbjct: 220 AGLALIDLGQ---SIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVY 276
Query: 176 DLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERPNA 235
+L G ++ ++++ + D E L +
Sbjct: 277 CMLFGTYMK-------VKNEGGECKPEGLFRRLPHLDMWNEFFH---VMLNIPDCHHLPS 326
Query: 236 KSLVISLM 243
L+ +
Sbjct: 327 LDLLRQKL 334
|
| >2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae} Length = 514 | Back alignment and structure |
|---|
Score = 50.1 bits (120), Expect = 8e-07
Identities = 19/89 (21%), Positives = 35/89 (39%), Gaps = 6/89 (6%)
Query: 326 GDTAFRAKDFSTAIDCYTQFIDGGTMVSP--TVYARRCLSYLMNDMPQEALGDAMQAQVV 383
G+ FR K + AI Y ++ + Y+ Y+ ++ + + +A +
Sbjct: 13 GNQFFRNKKYDDAIKYYNWALE----LKEDPVFYSNLSACYVSVGDLKKVVEMSTKALEL 68
Query: 384 SPDWPTALYLQAACLFSLGMENDARETLK 412
PD+ L +A+ LG DA L
Sbjct: 69 KPDYSKVLLRRASANEGLGKFADAMFDLS 97
|
| >3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* 2jiu_A* ... Length = 327 | Back alignment and structure |
|---|
Score = 49.3 bits (118), Expect = 1e-06
Identities = 29/146 (19%), Positives = 58/146 (39%), Gaps = 11/146 (7%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQPMKWAMRLRV 92
L+EA + ++ + + L+G C L+ + MP L ++ + L
Sbjct: 65 LDEAYVMASVDNPHVCRLLGIC-LTSTVQLITQLMPFGCLLDYV-REHKDNIGSQYLLNW 122
Query: 93 ALYLAQALEYCSSKGRALYH-DLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTN---- 147
+ +A+ + Y + L H DL A +L + +++ FGL K +
Sbjct: 123 CVQIAKGMNYLEDRR--LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK 180
Query: 148 --LAFTPPEYMRTGRVTPESVVYSFG 171
+ + E + T +S V+S+G
Sbjct: 181 VPIKWMALESILHRIYTHQSDVWSYG 206
|
| >3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 3lau_A* 2wtv_A* ... Length = 279 | Back alignment and structure |
|---|
Score = 48.4 bits (116), Expect = 2e-06
Identities = 42/181 (23%), Positives = 72/181 (39%), Gaps = 27/181 (14%)
Query: 62 LVAEFMPNETLAKHLFHWETQPMKWAMRL---RVALYLAQ---ALEYCSSKGRALYH-DL 114
L+ E+ P T+ + L + + R A Y+ + AL YC SK + H D+
Sbjct: 86 LILEYAPLGTVYREL--------QKLSKFDEQRTATYITELANALSYCHSKR--VIHRDI 135
Query: 115 NAYRILFDKDGNPRLSSFGLMKNSRDGKSYST--NLAFTPPEYMRTGRVTPESV-VYSFG 171
+L G +++ FG ++ + L + PPE M GR+ E V ++S G
Sbjct: 136 KPENLLLGSAGELKIADFGWSVHAPSSRRTDLCGTLDYLPPE-MIEGRMHDEKVDLWSLG 194
Query: 172 TMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARE 231
+ + L GK PP A + + ++ + L SR L+ +
Sbjct: 195 VLCYEFLVGK--PPFEANTYQETYKRISRVEFTFPDFVTEG----ARDLISRLLKHNPSQ 248
Query: 232 R 232
R
Sbjct: 249 R 249
|
| >3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A* Length = 281 | Back alignment and structure |
|---|
Score = 48.0 bits (115), Expect = 2e-06
Identities = 33/145 (22%), Positives = 55/145 (37%), Gaps = 10/145 (6%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQPMKWAMRLRV 92
+ EA + NL + LIG E + ++ E P L +L + + +
Sbjct: 61 MSEAVIMKNLDHPHIVKLIGII-EEEPTWIIMELYPYGELGHYLERNKNSLKVLTL-VLY 118
Query: 93 ALYLAQALEYCSSKGRALYH-DLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLA-- 149
+L + +A+ Y S H D+ IL +L FGL + D Y ++
Sbjct: 119 SLQICKAMAYLESIN--CVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRL 176
Query: 150 ---FTPPEYMRTGRVTPESVVYSFG 171
+ PE + R T S V+ F
Sbjct: 177 PIKWMSPESINFRRFTTASDVWMFA 201
|
| >3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus} Length = 332 | Back alignment and structure |
|---|
Score = 48.3 bits (115), Expect = 2e-06
Identities = 38/197 (19%), Positives = 66/197 (33%), Gaps = 37/197 (18%)
Query: 65 EFMPNETLAKHLFHWETQPMKWAMRLRVALY----LAQALEYCSSKGRALYHDL---NAY 117
+ E L + + V L+ +A+A+E+ SKG ++ DL N
Sbjct: 141 QLCRKENLKDWM---NRRCSLEDREHGVCLHIFIQIAEAVEFLHSKG-LMHRDLKPSN-- 194
Query: 118 RILFDKDGNPRLSSFGLMKNSRDGKSYSTNLAFTPPEYMRTGRV-TP------------- 163
I F D ++ FGL+ + T L P TG+V T
Sbjct: 195 -IFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTKLYMSPEQIHGNNY 253
Query: 164 --ESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLA 221
+ ++S G +L +LL I + + + F+ + + +
Sbjct: 254 SHKVDIFSLGLILFELLYSF--STQMERVRIITD----VRNLKFPLLFT-QKYPQEHMMV 306
Query: 222 SRCLQSEARERPNAKSL 238
L ERP A +
Sbjct: 307 QDMLSPSPTERPEATDI 323
|
| >3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens} Length = 367 | Back alignment and structure |
|---|
Score = 48.5 bits (116), Expect = 2e-06
Identities = 52/260 (20%), Positives = 90/260 (34%), Gaps = 41/260 (15%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHL---FHWETQPMKWAMR 89
L EA + + + IG ++ R ++ E M L L +QP AM
Sbjct: 122 LMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAML 181
Query: 90 --LRVALYLAQALEYCSSKGRALYH-DLNAYRILFDKDGNPRL---SSFGLMKNSRD--G 141
L VA +A +Y H D+ A L G R+ FG+ +RD
Sbjct: 182 DLLHVARDIACGCQYLEENH--FIHRDIAARNCLLTCPGPGRVAKIGDFGM---ARDIYR 236
Query: 142 KSY---STNLAF----TPPEYMRTGRVTPESVVYSFGTMLLDLLS-GKH----IPPSHAL 189
Y PPE G T ++ +SFG +L ++ S G L
Sbjct: 237 AGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVL 296
Query: 190 DLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERPNAKSLVISLMSLQKEA 249
+ + S + + + R+ ++C Q + +RPN ++ + ++
Sbjct: 297 EFVTSGGRMDPPKNCPG---------PVYRIMTQCWQHQPEDRPNFAIILERIEYCTQD- 346
Query: 250 EQVPSYVLLGIQHETAPSTK 269
P + + E P +
Sbjct: 347 ---PDVINTALPIEYGPLVE 363
|
| >3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} Length = 298 | Back alignment and structure |
|---|
Score = 47.6 bits (114), Expect = 3e-06
Identities = 48/234 (20%), Positives = 91/234 (38%), Gaps = 27/234 (11%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERLL-VAEFMPNETLAKHLFHWETQPMKWAMRLR 91
L E + L + LIG + + +M + L + + + P + +
Sbjct: 70 LREGLLMRGLNHPNVLALIGIMLPPEGLPHVLLPYMCHGDLLQFIRSPQRNPTVKDL-IS 128
Query: 92 VALYLAQALEYCSSKGRALYH-DLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLAF 150
L +A+ +EY + + H DL A + D+ +++ FGL ++ D + YS
Sbjct: 129 FGLQVARGMEYLAEQK--FVHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHR 186
Query: 151 --------TPPEYMRTGRVTPESVVYSFGTMLLDLLS-GK----HIPPSHALDLIRSKNF 197
T E ++T R T +S V+SFG +L +LL+ G HI P +
Sbjct: 187 HARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDPFDLTHFLAQGRR 246
Query: 198 LLLMDSALEGHFSNDEGTELVRLASRCLQSEARERPNAKSLVISLMSLQKEAEQ 251
L + + L ++ +C +++ RP + LV + +
Sbjct: 247 LPQPEYCPD---------SLYQVMQQCWEADPAVRPTFRVLVGEVEQIVSALLG 291
|
| >3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A* Length = 313 | Back alignment and structure |
|---|
Score = 48.0 bits (115), Expect = 3e-06
Identities = 44/244 (18%), Positives = 84/244 (34%), Gaps = 38/244 (15%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEAD-----ERLLVAEFMPN----ETLAKHLFHWETQP 83
L EA + + + L+G C E + +++ FM L +
Sbjct: 84 LSEAACMKDFSHPNVIRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKH 143
Query: 84 MKWAMRLRVALYLAQALEYCSSKGRALYH-DLNAYRILFDKDGNPRLSSFGLMKNSRD-- 140
+ L+ + +A +EY S++ H DL A + D ++ FGL S+
Sbjct: 144 IPLQTLLKFMVDIALGMEYLSNRN--FLHRDLAARNCMLRDDMTVCVADFGL---SKKIY 198
Query: 141 GKSY---STNLAF----TPPEYMRTGRVTPESVVYSFGTMLLDLLS-GK----HIPPSHA 188
Y E + T +S V++FG + ++ + G +
Sbjct: 199 SGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNHEM 258
Query: 189 LDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERPNAKSLVISLMSLQKE 248
D + + L + L+ EL + C +++ +RP L + L L +
Sbjct: 259 YDYLLHGHRLKQPEDCLD---------ELYEIMYSCWRTDPLDRPTFSVLRLQLEKLLES 309
Query: 249 AEQV 252
V
Sbjct: 310 LPDV 313
|
| >1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 287 | Back alignment and structure |
|---|
Score = 47.6 bits (114), Expect = 3e-06
Identities = 34/147 (23%), Positives = 60/147 (40%), Gaps = 12/147 (8%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQPMKWAMRLRV 92
+ EA+ + L + + LIG C +A+ +LV E L K L + + + +
Sbjct: 58 MREAQIMHQLDNPYIVRLIGVC-QAEALMLVMEMAGGGPLHKFLVGKREE-IPVSNVAEL 115
Query: 93 ALYLAQALEYCSSKGRALYH-DLNAYRILFDKDGNPRLSSFGLMKNSRDGKSY---STNL 148
++ ++Y K H DL A +L ++S FGL K SY +
Sbjct: 116 LHQVSMGMKYLEEKN--FVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAG 173
Query: 149 AF----TPPEYMRTGRVTPESVVYSFG 171
+ PE + + + S V+S+G
Sbjct: 174 KWPLKWYAPECINFRKFSSRSDVWSYG 200
|
| >2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A* Length = 327 | Back alignment and structure |
|---|
Score = 47.3 bits (113), Expect = 4e-06
Identities = 46/257 (17%), Positives = 87/257 (33%), Gaps = 35/257 (13%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHL-----FHWETQPMKWA 87
L EA + + + IG ++ R ++ E M L L + +
Sbjct: 81 LMEALIISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAML 140
Query: 88 MRLRVALYLAQALEYCSSKGRALYH-DLNAYRILFDKDGNPRL---SSFGLMKNSRDGKS 143
L VA +A +Y H D+ A L G R+ FG+ ++
Sbjct: 141 DLLHVARDIACGCQYLEENH--FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASY 198
Query: 144 YSTNLA------FTPPEYMRTGRVTPESVVYSFGTMLLDLLS-GKH----IPPSHALDLI 192
Y + PPE G T ++ +SFG +L ++ S G L+ +
Sbjct: 199 YRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFV 258
Query: 193 RSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERPNAKSLVISLMSLQKEAEQV 252
S + + + R+ ++C Q + +RPN ++ + ++
Sbjct: 259 TSGGRMDPPKNCPG---------PVYRIMTQCWQHQPEDRPNFAIILERIEYCTQD---- 305
Query: 253 PSYVLLGIQHETAPSTK 269
P + + E P +
Sbjct: 306 PDVINTALPIEYGPLVE 322
|
| >4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A* Length = 299 | Back alignment and structure |
|---|
Score = 47.0 bits (112), Expect = 4e-06
Identities = 40/198 (20%), Positives = 65/198 (32%), Gaps = 39/198 (19%)
Query: 65 EFMPNETLAKHLFHWETQPMKWAMRLRVALY----LAQALEYCSSKGRALYH-DLNAYRI 119
+ E L + + V L+ +A+A+E+ SKG L H DL I
Sbjct: 95 QLCRKENLKDWM---NGRCTIEERERSVCLHIFLQIAEAVEFLHSKG--LMHRDLKPSNI 149
Query: 120 LFDKDGNPRLSSFGLMKNSRDGKSYSTNLAFTPPEYMRTGRV-TP--------------- 163
F D ++ FGL+ + T L P TG+V T
Sbjct: 150 FFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSH 209
Query: 164 ESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGT---ELVRL 220
+ ++S G +L +LL P S ++ + + F +
Sbjct: 210 KVDIFSLGLILFELL----YPFSTQMERV------RTLTDVRNLKFPPLFTQKYPCEYVM 259
Query: 221 ASRCLQSEARERPNAKSL 238
L ERP A ++
Sbjct: 260 VQDMLSPSPMERPEAINI 277
|
| >4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp} Length = 294 | Back alignment and structure |
|---|
Score = 46.8 bits (112), Expect = 5e-06
Identities = 32/157 (20%), Positives = 62/157 (39%), Gaps = 12/157 (7%)
Query: 35 EAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQPMKWAMRLRVAL 94
E L + + ++I E D LV E++ TL++++ P+ +
Sbjct: 61 EVHNSSQLSHQNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYIE--SHGPLSVDTAINFTN 118
Query: 95 YLAQALEYCSSKGRALYH-DLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLAF-TP 152
+ +++ + H D+ IL D + ++ FG+ K + TN T
Sbjct: 119 QILDGIKHAHDMR--IVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQTNHVLGTV 176
Query: 153 ----PEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPP 185
PE + + +YS G +L ++L G+ PP
Sbjct: 177 QYFSPEQAKGEATDECTDIYSIGIVLYEMLVGE--PP 211
|
| >2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A* Length = 279 | Back alignment and structure |
|---|
Score = 46.5 bits (111), Expect = 7e-06
Identities = 35/154 (22%), Positives = 57/154 (37%), Gaps = 19/154 (12%)
Query: 96 LAQALEYCSSKGRALYH----DLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLAFT 151
L AL+ C + + DL + D N +L FGL + S++ T
Sbjct: 120 LTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKTFVGT 179
Query: 152 P----PEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEG 207
P PE M +S ++S G +L +L + PP + + L EG
Sbjct: 180 PYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALM--PP------FTAFSQKELAGKIREG 231
Query: 208 HF---SNDEGTELVRLASRCLQSEARERPNAKSL 238
F EL + +R L + RP+ + +
Sbjct: 232 KFRRIPYRYSDELNEIITRMLNLKDYHRPSVEEI 265
|
| >3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A Length = 286 | Back alignment and structure |
|---|
Score = 45.9 bits (109), Expect = 1e-05
Identities = 32/215 (14%), Positives = 62/215 (28%), Gaps = 55/215 (25%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQPMKWAMRLRV 92
L + + +A ++ + L+VAE++ +L + +T P +R
Sbjct: 79 LSRTLRLSRIDKPGVARVLDVVHTRAGGLVVAEWIRGGSLQEVA---DTSPSPVGA-IRA 134
Query: 93 ALYLAQALEYCSSKGRALYH-DLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLAFT 151
LA A + G + + R+ DG+ L+ M
Sbjct: 135 MQSLAAAADAAHRAG--VALSIDHPSRVRVSIDGDVVLAYPATM---------------- 176
Query: 152 PPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSN 211
P+ + G L LL + P + S L +
Sbjct: 177 -------PDANPQDDIRGIGASLYALLVNR--WPLPEAGV----------RSGLAPAERD 217
Query: 212 DEGT-------------ELVRLASRCLQSEARERP 233
G ++ +A+R +Q + R
Sbjct: 218 TAGQPIEPADIDRDIPFQISAVAARSVQGDGGIRS 252
|
| >3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 3q6w_A* 3r7o_A* 3q6u_A* 3cth_A* 3ce3_A* 3ctj_A* ... Length = 298 | Back alignment and structure |
|---|
Score = 45.7 bits (109), Expect = 1e-05
Identities = 46/225 (20%), Positives = 92/225 (40%), Gaps = 27/225 (12%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADE-RLLVAEFMPNETLAKHLFHWETQPMKWAMRLR 91
L E + + + +L+G C ++ L+V +M + L + + P + +
Sbjct: 74 LTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL-IG 132
Query: 92 VALYLAQALEYCSSKGRALYH-DLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLAF 150
L +A+ ++Y +SK H DL A + D+ +++ FGL ++ D + YS +
Sbjct: 133 FGLQVAKGMKYLASKK--FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKT 190
Query: 151 --------TPPEYMRTGRVTPESVVYSFGTMLLDLLS-GK----HIPPSHALDLIRSKNF 197
E ++T + T +S V+SFG +L +L++ G + +
Sbjct: 191 GAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRR 250
Query: 198 LLLMDSALEGHFSNDEGTELVRLASRCLQSEARERPNAKSLVISL 242
LL + + L + +C +A RP+ LV +
Sbjct: 251 LLQPEYCPD---------PLYEVMLKCWHPKAEMRPSFSELVSRI 286
|
| >1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A Length = 131 | Back alignment and structure |
|---|
Score = 43.4 bits (103), Expect = 1e-05
Identities = 20/117 (17%), Positives = 33/117 (28%), Gaps = 19/117 (16%)
Query: 323 KKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTV---YARRCLSYLMNDMPQEALGDAMQ 379
K+ G+ A++ KDF TA+ Y + + + PT + Y + +
Sbjct: 8 KELGNDAYKKKDFDTALKHYDKAKE----LDPTNMTYITNQAAVYFEKGDYNKCRELCEK 63
Query: 380 A-------QVVSPDWPTALYLQAACLFSLGMENDARETLK-----DGTNLEAKKNKN 424
A + A F DA T KK +
Sbjct: 64 AIEVGRENREDYRQIAKAYARIGNSYFKEEKYKDAIHFYNKSLAEHRTPDVLKKCQQ 120
|
| >2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A* Length = 310 | Back alignment and structure |
|---|
Score = 45.8 bits (109), Expect = 1e-05
Identities = 32/159 (20%), Positives = 62/159 (38%), Gaps = 20/159 (12%)
Query: 92 VALYLAQ---ALEYCSSKGRALYH-DLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTN 147
V Y Q ALE+ S+ + H D+ + G +L GL + + + +
Sbjct: 138 VWKYFVQLCSALEHMHSRR--VMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHS 195
Query: 148 LAFTP----PEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDS 203
L TP PE + +S ++S G +L ++ + + P + N L
Sbjct: 196 LVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQ--SPFYG----DKMNLYSLCKK 249
Query: 204 ALEGHF----SNDEGTELVRLASRCLQSEARERPNAKSL 238
+ + S+ EL +L + C+ + +RP+ +
Sbjct: 250 IEQCDYPPLPSDHYSEELRQLVNMCINPDPEKRPDVTYV 288
|
| >2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X* Length = 348 | Back alignment and structure |
|---|
Score = 45.5 bits (108), Expect = 2e-05
Identities = 27/139 (19%), Positives = 55/139 (39%), Gaps = 22/139 (15%)
Query: 62 LVAEFMPNETLAKHLFHWETQPMKWAMRL---RVALYLAQ---ALEYCSSKGRALYH-DL 114
++ E+M N+++ K ++ + + + + + Y ++ + + H D+
Sbjct: 120 IIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNE-KNICHRDV 178
Query: 115 ---NAYRILFDKDGNPRLSSFGLMKNSRDGKSYST--NLAFTPPEYMRTGRVT---PESV 166
N IL DK+G +LS FG + D K + F PPE + + +
Sbjct: 179 KPSN---ILMDKNGRVKLSDFGESEYMVDKKIKGSRGTYEFMPPE-FFSNESSYNGAKVD 234
Query: 167 VYSFGTMLLDLLSGKHIPP 185
++S G L + P
Sbjct: 235 IWSLGICLYVMFYNV--VP 251
|
| >3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7 Length = 373 | Back alignment and structure |
|---|
Score = 45.1 bits (107), Expect = 2e-05
Identities = 45/231 (19%), Positives = 93/231 (40%), Gaps = 33/231 (14%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADE-RLLVAEFMPNETLAKHLFHWETQPMKWAMRLR 91
L E + + + +L+G C ++ L+V +M + L + + P + +
Sbjct: 138 LTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL-IG 196
Query: 92 VALYLAQALEYCSSKGRALYH-DLNAYRILFDKDGNPRLSSFGLMKNSRD------GKSY 144
L +A+ +++ +SK H DL A + D+ +++ FGL +RD +
Sbjct: 197 FGLQVAKGMKFLASKK--FVHRDLAARNCMLDEKFTVKVADFGL---ARDMYDKEFDSVH 251
Query: 145 STNLAF-----TPPEYMRTGRVTPESVVYSFGTMLLDLLS-GK----HIPPSHALDLIRS 194
+ A E ++T + T +S V+SFG +L +L++ G + +
Sbjct: 252 NKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQ 311
Query: 195 KNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERPNAKSLVISLMSL 245
LL + + L + +C +A RP+ LV + ++
Sbjct: 312 GRRLLQPEYCPD---------PLYEVMLKCWHPKAEMRPSFSELVSRISAI 353
|
| >1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B* Length = 291 | Back alignment and structure |
|---|
Score = 44.9 bits (107), Expect = 2e-05
Identities = 36/160 (22%), Positives = 59/160 (36%), Gaps = 12/160 (7%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQPMKWAMRLRV 92
+ E A+ +L L L G +V E P +L L R
Sbjct: 69 IREVNAMHSLDHRNLIRLYGVVLT-PPMKMVTELAPLGSLLDRL-RKHQGHFLLGTLSRY 126
Query: 93 ALYLAQALEYCSSKGRALYH-DLNAYRILFDKDGNPRLSSFGLMKN-SRDGKSYSTN--- 147
A+ +A+ + Y SK H DL A +L ++ FGLM+ ++ Y
Sbjct: 127 AVQVAEGMGYLESKR--FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHR 184
Query: 148 ---LAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIP 184
A+ PE ++T + S + FG L ++ + P
Sbjct: 185 KVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEP 224
|
| >4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens} Length = 329 | Back alignment and structure |
|---|
Score = 45.0 bits (107), Expect = 3e-05
Identities = 36/162 (22%), Positives = 59/162 (36%), Gaps = 22/162 (13%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHL-------------FHW 79
EA+ + L+ + + G C E L+V E+M + L + L
Sbjct: 91 QREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDV 150
Query: 80 ETQPMKWAMRLRVALYLAQALEYCSSKGRALYH-DLNAYRILFDKDGNPRLSSFGLMKNS 138
P+ L VA +A + Y + H DL L + ++ FG+ ++
Sbjct: 151 APGPLGLGQLLAVASQVAAGMVYLAGLH--FVHRDLATRNCLVGQGLVVKIGDFGMSRDI 208
Query: 139 RDGKSY--STNLAF----TPPEYMRTGRVTPESVVYSFGTML 174
Y PPE + + T ES V+SFG +L
Sbjct: 209 YSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVL 250
|
| >3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens} Length = 337 | Back alignment and structure |
|---|
Score = 44.7 bits (106), Expect = 3e-05
Identities = 30/206 (14%), Positives = 57/206 (27%), Gaps = 28/206 (13%)
Query: 90 LRVALYLAQALEYCSSKGRALYH-DLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNL 148
L++ +A+++ + + H DL +L G +L FG YS +
Sbjct: 139 LKIFYQTCRAVQHMHRQKPPIIHRDLKVENLLLSNQGTIKLCDFGSATTISHYPDYSWSA 198
Query: 149 A-----------FTPPEYM--------RTGRVTPESVVYSFGTMLLDLLSGKHIPPSHAL 189
T P Y + + +++ G +L L +H A
Sbjct: 199 QRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAK 258
Query: 190 DLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERPNAKSLVISLMSLQKEA 249
I + + + T L LQ ER + +V L +
Sbjct: 259 LRIVNGKYSIPPHD----TQY----TVFHSLIRAMLQVNPEERLSIAEVVHQLQEIAAAR 310
Query: 250 EQVPSYVLLGIQHETAPSTKPLSLTP 275
P + + +
Sbjct: 311 NVNPKSPITELLEQNGGYGSATLSRG 336
|
| >3v5q_A NT-3 growth factor receptor; kinase domain, kinase, phosphorylation, transferase-transfer inhibitor complex; HET: 0F4; 2.20A {Homo sapiens} Length = 297 | Back alignment and structure |
|---|
Score = 44.5 bits (106), Expect = 3e-05
Identities = 35/163 (21%), Positives = 62/163 (38%), Gaps = 23/163 (14%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPN--------------ETLAKHLFH 78
EA+ + NL+ E + G C + D ++V E+M + L
Sbjct: 65 QREAELLTNLQHEHIVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPR 124
Query: 79 WETQPMKWAMRLRVALYLAQALEYCSSKGRALYH-DLNAYRILFDKDGNPRLSSFGLMKN 137
+ + L +A +A + Y +S+ H DL L + ++ FG+ ++
Sbjct: 125 QAKGELGLSQMLHIASQIASGMVYLASQH--FVHRDLATRNCLVGANLLVKIGDFGMSRD 182
Query: 138 SRDGKSYS--TNLAF----TPPEYMRTGRVTPESVVYSFGTML 174
Y + PPE + + T ES V+SFG +L
Sbjct: 183 VYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVIL 225
|
| >4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A* Length = 446 | Back alignment and structure |
|---|
Score = 44.7 bits (106), Expect = 3e-05
Identities = 39/153 (25%), Positives = 65/153 (42%), Gaps = 39/153 (25%)
Query: 53 CCYEADERL-LVAEFMPNETLAKHLFHWE---TQPMKWAMRLRVALYLAQ---ALEYCSS 105
++ +RL V E+ L HL E ++ R Y A+ AL+Y S
Sbjct: 215 YSFQTHDRLCFVMEYANGGELFFHL-SRERVFSED-------RARFYGAEIVSALDYLHS 266
Query: 106 KGRALYHDLNAYRILFDKDGNPRLSSFGLMK-NSRDGKSYSTNLAF--TPPEYMRTGRVT 162
+ +Y DL ++ DKDG+ +++ FGL K +DG + T F T PEY+
Sbjct: 267 EKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKT---FCGT-PEYL-----A 317
Query: 163 PESVVY----------SFGTMLLDLLSGKHIPP 185
PE + G ++ +++ G+ P
Sbjct: 318 PEVLEDNDYGRAVDWWGLGVVMYEMMCGR--LP 348
|
| >4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans} Length = 127 | Back alignment and structure |
|---|
Score = 42.3 bits (100), Expect = 4e-05
Identities = 20/117 (17%), Positives = 34/117 (29%), Gaps = 19/117 (16%)
Query: 323 KKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTV---YARRCLSYLMNDMPQEALGDAMQ 379
K G+ A++ KDF A Y + I+ + P+ Y + Y E + +
Sbjct: 12 KDLGNAAYKQKDFEKAHVHYDKAIE----LDPSNITFYNNKAAVYFEEKKFAECVQFCEK 67
Query: 380 AQVVSPDWPT-------ALYLQAACLFSLGMENDARETLK-----DGTNLEAKKNKN 424
A V + A+ + A + KK K
Sbjct: 68 AVEVGRETRADYKLIAKAMSRAGNAFQKQNDLSLAVQWFHRSLSEFRDPELVKKVKE 124
|
| >2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ... Length = 284 | Back alignment and structure |
|---|
Score = 44.1 bits (105), Expect = 4e-05
Identities = 33/134 (24%), Positives = 55/134 (41%), Gaps = 23/134 (17%)
Query: 62 LVAEFMPNETLAKHLFHWETQPMKWAMRL---RVALYLAQ---ALEYCSSKGRALYH-DL 114
L+ EF P L K L + R R A ++ + AL YC + + H D+
Sbjct: 91 LMLEFAPRGELYKEL--------QKHGRFDEQRSATFMEELADALHYCHERK--VIHRDI 140
Query: 115 NAYRILFDKDGNPRLSSFGLMKNSRDGKSYST--NLAFTPPEYMRTGRVTPESV-VYSFG 171
+L G +++ FG ++ + + L + PPE M G+ E V ++ G
Sbjct: 141 KPENLLMGYKGELKIADFGWSVHAPSLRRRTMCGTLDYLPPE-MIEGKTHDEKVDLWCAG 199
Query: 172 TMLLDLLSGKHIPP 185
+ + L G PP
Sbjct: 200 VLCYEFLVGM--PP 211
|
| >2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens} Length = 317 | Back alignment and structure |
|---|
Score = 44.3 bits (105), Expect = 4e-05
Identities = 40/225 (17%), Positives = 72/225 (32%), Gaps = 35/225 (15%)
Query: 58 DERLLVAEFMPNETLAKHLFHWETQPMKWAMR--LRVALYLAQALEYCSSKGRALYH-DL 114
E L+ F TL + + + L + L + + LE +KG H DL
Sbjct: 103 HEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAKG--YAHRDL 160
Query: 115 NAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLAFTPPEYMRTG--------------- 159
IL +G P L G M + S +
Sbjct: 161 KPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSH 220
Query: 160 -RVTPESVVYSFGTMLLDLLSGKH-----IPPSHALDLIRSKNFLLLMDSALEGHFSNDE 213
+ + V+S G +L ++ G+ ++ L + S+
Sbjct: 221 CVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDSVALAVQNQLSIPQSP----RHSSA- 275
Query: 214 GTELVRLASRCLQSEARERPNAKSLVISLMSLQKEA-EQVPSYVL 257
L +L + + + +RP+ L+ L +LQ A Q + +L
Sbjct: 276 ---LWQLLNSMMTVDPHQRPHIPLLLSQLEALQPPAPGQHTTQIL 317
|
| >2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis} Length = 309 | Back alignment and structure |
|---|
Score = 43.8 bits (104), Expect = 6e-05
Identities = 30/137 (21%), Positives = 49/137 (35%), Gaps = 13/137 (9%)
Query: 56 EADERL-LVAEFMPNETLAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYH-D 113
E D +L + + LA L P+ + + + AL+ + G H D
Sbjct: 104 EIDGQLYVDMRLINGVDLAAMLR--RQGPLAPPRAVAIVRQIGSALDAAHAAG--ATHRD 159
Query: 114 LNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTN-----LAFTPPEYMRTGRVTPESVVY 168
+ IL D L FG+ + D K L + PE T + +Y
Sbjct: 160 VKPENILVSADDFAYLVDFGIASATTDEKLTQLGNTVGTLYYMAPERFSESHATYRADIY 219
Query: 169 SFGTMLLDLLSGKHIPP 185
+ +L + L+G PP
Sbjct: 220 ALTCVLYECLTGS--PP 234
|
| >3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens} Length = 432 | Back alignment and structure |
|---|
Score = 44.0 bits (104), Expect = 6e-05
Identities = 35/157 (22%), Positives = 57/157 (36%), Gaps = 20/157 (12%)
Query: 96 LAQALEYCSSKGRALYH-DLNAYRILF---DKDGNPR--LSSFGLMKNSRDGKSYSTNLA 149
L + S + H DL + IL + G + +S FGL K G+ + +
Sbjct: 127 TTSGLAHLHSLN--IVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRS 184
Query: 150 F---TP----PEYMR---TGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLL 199
T PE + T ++S G + ++S P +L R N LL
Sbjct: 185 GVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQ--RQANILL 242
Query: 200 LMDSALEGHFSNDEGTELVRLASRCLQSEARERPNAK 236
S H E L + + + ++RP+AK
Sbjct: 243 GACSLDCLHPEKHEDVIARELIEKMIAMDPQKRPSAK 279
|
| >2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens} Length = 412 | Back alignment and structure |
|---|
Score = 43.9 bits (104), Expect = 6e-05
Identities = 31/150 (20%), Positives = 58/150 (38%), Gaps = 25/150 (16%)
Query: 53 CCYEADERL-LVAEFMPNETLAKHLFHWETQ-PMKWAMRLRVALYLAQ---ALEYCSSKG 107
++ + L LV E+ L L + + P + A YLA+ A++ G
Sbjct: 128 FAFQDENYLYLVMEYYVGGDLLTLLSKFGERIPAEMA-----RFYLAEIVMAIDSVHRLG 182
Query: 108 RALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLAFTPPEYM-----RTGRVT 162
++ D+ IL D+ G+ RL+ FG R + + +A P+Y+ +
Sbjct: 183 -YVHRDIKPDNILLDRCGHIRLADFGSCLKLRADGTVRSLVAVGTPDYLSPEILQAVGGG 241
Query: 163 PESVVY-------SFGTMLLDLLSGKHIPP 185
P + Y + G ++ G+ P
Sbjct: 242 PGTGSYGPECDWWALGVFAYEMFYGQ--TP 269
|
| >3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A* Length = 311 | Back alignment and structure |
|---|
Score = 43.4 bits (103), Expect = 6e-05
Identities = 37/163 (22%), Positives = 60/163 (36%), Gaps = 18/163 (11%)
Query: 35 EAKAVGNLRSERLANL--IGCCYEADERL--LVAEFMPNETLAKHLFHWETQPMKWAMRL 90
EA+ L + + G L +V E++ TL + PM +
Sbjct: 62 EAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVH--TEGPMTPKRAI 119
Query: 91 RVALYLAQALEYCSSKGRALYH-DLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTN-- 147
V QAL + G + H D+ I+ ++ FG+ + D + T
Sbjct: 120 EVIADACQALNFSHQNG--IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTA 177
Query: 148 -----LAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPP 185
+ PE R V S VYS G +L ++L+G+ PP
Sbjct: 178 AVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGE--PP 218
|
| >3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A Length = 328 | Back alignment and structure |
|---|
Score = 43.4 bits (103), Expect = 8e-05
Identities = 48/215 (22%), Positives = 76/215 (35%), Gaps = 41/215 (19%)
Query: 96 LAQALEYCSSKGRALYH-DLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYST---NLAFT 151
+ A++YC K + H DL A +L D D N +++ FG G +
Sbjct: 123 IVSAVQYCHQKR--IVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDAFCGAPPYA 180
Query: 152 PPEYMRTGR--VTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHF 209
PE + G+ PE V+S G +L L+SG +P +N L + L G +
Sbjct: 181 APE-LFQGKKYDGPEVDVWSLGVILYTLVSG-SLP-------FDGQNLKELRERVLRGKY 231
Query: 210 SNDEG--TELVRLASRCLQSEARERPNAKSLVISLMSLQKEAEQVPSYVLLGIQHE-TAP 266
T+ L R L +R EQ+ ++
Sbjct: 232 RIPFYMSTDCENLLKRFLVLNPIKRGT--------------LEQI-------MKDRWINA 270
Query: 267 STKPLSLTPLGEACSRLDLTAIHEILEGMGYKDDE 301
+ L P E + +I+ GMGY +E
Sbjct: 271 GHEEDELKPFVEPELDISDQKRIDIMVGMGYSQEE 305
|
| >3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A Length = 537 | Back alignment and structure |
|---|
Score = 43.9 bits (104), Expect = 8e-05
Identities = 24/90 (26%), Positives = 38/90 (42%), Gaps = 7/90 (7%)
Query: 326 GDTAFRAKDFSTAIDCYTQFIDGGTMVSP---TVYARRCLSYLMNDMPQEALGDAMQAQV 382
G+ F AK+F+ AI Y I+ + P Y+ Y+ ++ + +A
Sbjct: 32 GNHFFTAKNFNEAIKYYQYAIE----LDPNEPVFYSNISACYISTGDLEKVIEFTTKALE 87
Query: 383 VSPDWPTALYLQAACLFSLGMENDARETLK 412
+ PD AL +A+ SLG DA L
Sbjct: 88 IKPDHSKALLRRASANESLGNFTDAMFDLS 117
|
| >2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A Length = 142 | Back alignment and structure |
|---|
Score = 41.7 bits (98), Expect = 8e-05
Identities = 11/87 (12%), Positives = 24/87 (27%), Gaps = 1/87 (1%)
Query: 326 GDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSP 385
G ++A + A + + + ++AL ++
Sbjct: 25 GFNQYQAGKWDDAQKIFQALCMLDHY-DARYFLGLGACRQSLGLYEQALQSYSYGALMDI 83
Query: 386 DWPTALYLQAACLFSLGMENDARETLK 412
+ P + A C LG + A
Sbjct: 84 NEPRFPFHAAECHLQLGDLDGAESGFY 110
|
| >2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ... Length = 334 | Back alignment and structure |
|---|
Score = 43.4 bits (103), Expect = 8e-05
Identities = 47/251 (18%), Positives = 95/251 (37%), Gaps = 39/251 (15%)
Query: 33 LEEAKAVGNLRS-ERLANLIGCCYEADERLLVAEFMPNETLAKHL--------------F 77
+ E + + + + + NL+G C + ++ E+ L ++L
Sbjct: 88 VSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIN 147
Query: 78 HWETQPMKWAMRLRVALYLAQALEYCSSKGRALYH-DLNAYRILFDKDGNPRLSSFGLMK 136
+ M + + LA+ +EY +S+ H DL A +L ++ +++ FGL +
Sbjct: 148 RVPEEQMTFKDLVSCTYQLARGMEYLASQK--CIHRDLAARNVLVTENNVMKIADFGLAR 205
Query: 137 NSRDGKSY--STNLAF----TPPEYMRTGRVTPESVVYSFGTMLLDLLS-GKH----IPP 185
+ + Y +TN PE + T +S V+SFG ++ ++ + G IP
Sbjct: 206 DINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPV 265
Query: 186 SHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERPNAKSLVISLMSL 245
L++ + + + EL + C + +RP K LV L +
Sbjct: 266 EELFKLLKEGHRMDKPANCTN---------ELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 316
Query: 246 QKEAEQVPSYV 256
Y+
Sbjct: 317 LTLTTN-EEYL 326
|
| >1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A* Length = 327 | Back alignment and structure |
|---|
Score = 43.4 bits (103), Expect = 8e-05
Identities = 34/144 (23%), Positives = 52/144 (36%), Gaps = 26/144 (18%)
Query: 49 NLIGCCYEADERLLVAEFMPNETLAKHL--------------FHWETQPMKWAMRLRVAL 94
NL+G C L E+ P+ L L + + L A
Sbjct: 90 NLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAA 149
Query: 95 YLAQALEYCSSKGRALYH-DLNAYRILFDKDGNPRLSSFGLMKNSRDGKSY--STNLAF- 150
+A+ ++Y S K H DL A IL ++ +++ FGL SR + Y T
Sbjct: 150 DVARGMDYLSQKQ--FIHRDLAARNILVGENYVAKIADFGL---SRGQEVYVKKTMGRLP 204
Query: 151 ---TPPEYMRTGRVTPESVVYSFG 171
E + T S V+S+G
Sbjct: 205 VRWMAIESLNYSVYTTNSDVWSYG 228
|
| >2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A* Length = 303 | Back alignment and structure |
|---|
Score = 42.7 bits (101), Expect = 1e-04
Identities = 39/155 (25%), Positives = 62/155 (40%), Gaps = 15/155 (9%)
Query: 98 QALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGL---MKNSRDGKSYSTNLAF--TP 152
+ LEY G+ ++ D+ A IL +DG+ +++ FG+ + D F TP
Sbjct: 132 EGLEYLHKNGQ-IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTP 190
Query: 153 ----PEYMRTGRVTPESV-VYSFGTMLLDLLSGK----HIPPSHALDLIRSKNFLLLMDS 203
PE M R ++SFG ++L +G PP L L + L
Sbjct: 191 CWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDPPSLETG 250
Query: 204 ALEGHFSNDEGTELVRLASRCLQSEARERPNAKSL 238
+ G ++ S CLQ + +RP A L
Sbjct: 251 VQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAEL 285
|
| >4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens} Length = 384 | Back alignment and structure |
|---|
Score = 43.1 bits (102), Expect = 1e-04
Identities = 31/160 (19%), Positives = 60/160 (37%), Gaps = 31/160 (19%)
Query: 91 RVALYLAQ---ALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTN 147
V L++ + AL+Y ++ ++ D+ IL D+ G+ ++ F + +T
Sbjct: 116 TVKLFICELVMALDYLQNQR-IIHRDMKPDNILLDEHGHVHITDFNIAAMLPRETQITT- 173
Query: 148 LAFTPPEYMRTGRVTPESVV-------------YSFGTMLLDLLSGKHIPPSHALDLIRS 194
+A T YM PE +S G +LL G+ P H S
Sbjct: 174 MAGT-KPYM-----APEMFSSRKGAGYSFAVDWWSLGVTAYELLRGR--RPYHIRS---S 222
Query: 195 KNFLLLMDSALEG--HFSNDEGTELVRLASRCLQSEARER 232
+ ++ + + + E+V L + L+ +R
Sbjct: 223 TSSKEIVHTFETTVVTYPSAWSQEMVSLLKKLLEPNPDQR 262
|
| >3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens} Length = 382 | Back alignment and structure |
|---|
Score = 42.7 bits (101), Expect = 1e-04
Identities = 54/270 (20%), Positives = 103/270 (38%), Gaps = 40/270 (14%)
Query: 33 LEEAKAVGNLRS-ERLANLIGCCYEADERLLVAEFMPNETLAKHL--------------F 77
+ E + + + + + NL+G C + ++ E+ L ++L
Sbjct: 122 ISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPS 181
Query: 78 HWETQPMKWAMRLRVALYLAQALEYCSSKGRALYH-DLNAYRILFDKDGNPRLSSFGLMK 136
H + + + A +A+ +EY +SK H DL A +L +D +++ FGL +
Sbjct: 182 HNPEEQLSSKDLVSCAYQVARGMEYLASKK--CIHRDLAARNVLVTEDNVMKIADFGLAR 239
Query: 137 NSRDGKSY--STNLAF----TPPEYMRTGRVTPESVVYSFGTMLLDLLS-GKH----IPP 185
+ Y +TN PE + T +S V+SFG +L ++ + G +P
Sbjct: 240 DIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPV 299
Query: 186 SHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERPNAKSLVISLMS- 244
L++ + + + EL + C + +RP K LV L
Sbjct: 300 EELFKLLKEGHRMDKPSNCTN---------ELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 350
Query: 245 LQKEAEQVPSYVLLGIQHET-APSTKPLSL 273
+ + Q Y H+ P+T+ L
Sbjct: 351 VALTSNQEMGYYHHHHHHDYDIPTTENLYF 380
|
| >2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1 Length = 198 | Back alignment and structure |
|---|
Score = 41.7 bits (98), Expect = 1e-04
Identities = 19/111 (17%), Positives = 34/111 (30%), Gaps = 15/111 (13%)
Query: 323 KKHGDTAFRAKDFSTAIDCYTQ---FIDGGTMVSP------------TVYARRCLSYLMN 367
K+ G+ F+ + + AI Y + F + Y N
Sbjct: 42 KEEGNEFFKKNEINEAIVKYKEALDFFIHTEEWDDQILLDKKKNIEISCNLNLATCYNKN 101
Query: 368 DMPQEALGDAMQAQVVSPDWPTALYLQAACLFSLGMENDARETLKDGTNLE 418
+A+ A + + + ALY G +A+E L +L
Sbjct: 102 KDYPKAIDHASKVLKIDKNNVKALYKLGVANMYFGFLEEAKENLYKAASLN 152
|
| >2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A* Length = 321 | Back alignment and structure |
|---|
Score = 42.7 bits (101), Expect = 1e-04
Identities = 37/149 (24%), Positives = 60/149 (40%), Gaps = 16/149 (10%)
Query: 98 QALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLAFTP----P 153
QAL Y ++G ++ D+ + IL DG +LS FG +L TP P
Sbjct: 152 QALAYLHAQGV-IHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKRKSLVGTPYWMAP 210
Query: 154 EYMRTGRVTPESVVYSFGTMLLDLLSGK----HIPPSHALDLIRSKNFLLLMDSALEGHF 209
E + E ++S G M+++++ G+ P A+ +R L +S
Sbjct: 211 EVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKRLRDSPPPKLKNS---HKV 267
Query: 210 SNDEGTELVRLASRCLQSEARERPNAKSL 238
S L R L + +ER A+ L
Sbjct: 268 SP----VLRDFLERMLVRDPQERATAQEL 292
|
| >3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans} Length = 162 | Back alignment and structure |
|---|
Score = 41.2 bits (97), Expect = 1e-04
Identities = 22/122 (18%), Positives = 36/122 (29%), Gaps = 22/122 (18%)
Query: 323 KKHGDTAFRAKDFSTAIDCYTQ---FIDGGTMVSP--------------TVYARRCLSYL 365
++ G+ F KD+ AID Y +D + +YA YL
Sbjct: 15 RQKGNELFVQKDYKEAIDAYRDALTRLDTLILREKPGEPEWVELDRKNIPLYANMSQCYL 74
Query: 366 MNDMPQEALGDAMQAQVVSPDWPTALYLQAACLFSLGMENDARETLK-----DGTNLEAK 420
EA + + AL+ +A + ++A E LK
Sbjct: 75 NIGDLHEAEETSSEVLKREETNEKALFRRAKARIAAWKLDEAEEDLKLLLRNHPAAASVV 134
Query: 421 KN 422
Sbjct: 135 AR 136
|
| >3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A* Length = 303 | Back alignment and structure |
|---|
Score = 42.3 bits (100), Expect = 2e-04
Identities = 38/149 (25%), Positives = 63/149 (42%), Gaps = 18/149 (12%)
Query: 98 QALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLAFTP----P 153
+ L+Y S+ + ++ D+ A +L + G +L+ FG+ D + TP P
Sbjct: 130 KGLDYLHSEKK-IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAP 188
Query: 154 EYMRTGRVTPESVVYSFGTMLLDLLSGK----HIPPSHALDLIRSKNFLLLMDSALEGHF 209
E ++ ++ ++S G ++L G+ + P L LI KN LEG++
Sbjct: 189 EVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLI-PKN----NPPTLEGNY 243
Query: 210 SNDEGTELVRLASRCLQSEARERPNAKSL 238
S L CL E RP AK L
Sbjct: 244 SK----PLKEFVEACLNKEPSFRPTAKEL 268
|
| >2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A* Length = 335 | Back alignment and structure |
|---|
Score = 42.3 bits (100), Expect = 2e-04
Identities = 39/191 (20%), Positives = 66/191 (34%), Gaps = 41/191 (21%)
Query: 62 LVAEFMPNETLAKHLFHWETQPMKWAMRL---RVALYLAQ---ALEYCSSKGRALYH-DL 114
+V E +L + K L YL Q +Y + H DL
Sbjct: 118 VVLELCRRRSLLELH--------KRRKALTEPEARYYLRQIVLGCQYLHRNR--VIHRDL 167
Query: 115 NAYRILFDKDGNPRLSSFGL-MKNSRDGKSYST---NLAFTPPEYMRTGRV-TPESVVYS 169
+ ++D ++ FGL K DG+ + PE + + + + E V+S
Sbjct: 168 KLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPE-VLSKKGHSFEVDVWS 226
Query: 170 FGTMLLDLLSGKHIPPSHALDL------IRSKNFLLLMDSALEGHFSNDEGTELVRLASR 223
G ++ LL GK PP L I+ + ++ H + L +
Sbjct: 227 IGCIMYTLLVGK--PPFETSCLKETYLRIKKNEY------SIPKHIN----PVAASLIQK 274
Query: 224 CLQSEARERPN 234
LQ++ RP
Sbjct: 275 MLQTDPTARPT 285
|
| >1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A Length = 336 | Back alignment and structure |
|---|
Score = 42.2 bits (99), Expect = 2e-04
Identities = 13/118 (11%), Positives = 38/118 (32%), Gaps = 14/118 (11%)
Query: 315 QMQETLNSKKHGDTAFRAKDFSTAIDCYTQ---FIDGGTMVSP-----------TVYARR 360
+++++ K+ G F+ + A+ Y + +++ + S +
Sbjct: 143 KLEQSTIVKERGTVYFKEGKYKQALLQYKKIVSWLEYESSFSNEEAQKAQALRLASHLNL 202
Query: 361 CLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAACLFSLGMENDARETLKDGTNLE 418
+ +L A+ +A + + L + ++ AR + L
Sbjct: 203 AMCHLKLQAFSAAIESCNKALELDSNNEKGLSRRGEAHLAVNDFELARADFQKVLQLY 260
|
| >2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A* Length = 294 | Back alignment and structure |
|---|
Score = 41.8 bits (99), Expect = 2e-04
Identities = 39/191 (20%), Positives = 66/191 (34%), Gaps = 41/191 (21%)
Query: 62 LVAEFMPNETLAKHLFHWETQPMKWAMRL---RVALYLAQ---ALEYCSSKGRALYH-DL 114
+V E +L + K L YL Q +Y + H DL
Sbjct: 92 VVLELCRRRSLLELH--------KRRKALTEPEARYYLRQIVLGCQYLHRNR--VIHRDL 141
Query: 115 NAYRILFDKDGNPRLSSFGL-MKNSRDGKSYSTN---LAFTPPEYMRTGRV-TPESVVYS 169
+ ++D ++ FGL K DG+ + PE + + + + E V+S
Sbjct: 142 KLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPE-VLSKKGHSFEVDVWS 200
Query: 170 FGTMLLDLLSGKHIPPSHALDL------IRSKNFLLLMDSALEGHFSNDEGTELVRLASR 223
G ++ LL GK PP L I+ + ++ H + L +
Sbjct: 201 IGCIMYTLLVGK--PPFETSCLKETYLRIKKNEY------SIPKHIN----PVAASLIQK 248
Query: 224 CLQSEARERPN 234
LQ++ RP
Sbjct: 249 MLQTDPTARPT 259
|
| >1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ... Length = 337 | Back alignment and structure |
|---|
Score = 41.8 bits (99), Expect = 3e-04
Identities = 38/150 (25%), Positives = 62/150 (41%), Gaps = 34/150 (22%)
Query: 53 CCYEADERL-LVAEFMPNETLAKHLFHWETQPMKWAMRLRVALYLAQ---ALEYCSSKGR 108
++ +RL V E+ L HL + R Y A+ ALEY S+
Sbjct: 72 YAFQTHDRLCFVMEYANGGELFFHLSRERVFTEE-----RARFYGAEIVSALEYLHSRD- 125
Query: 109 ALYHDLNAYRILFDKDGNPRLSSFGLMK-NSRDGKSYSTNLAF--TPPEYMRTGRVTPES 165
+Y D+ ++ DKDG+ +++ FGL K DG + T F T PEY+ PE
Sbjct: 126 VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKT---FCGT-PEYL-----APEV 176
Query: 166 VVY----------SFGTMLLDLLSGKHIPP 185
+ G ++ +++ G+ P
Sbjct: 177 LEDNDYGRAVDWWGLGVVMYEMMCGR--LP 204
|
| >2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A Length = 370 | Back alignment and structure |
|---|
Score = 41.6 bits (98), Expect = 3e-04
Identities = 46/246 (18%), Positives = 93/246 (37%), Gaps = 38/246 (15%)
Query: 33 LEEAKAVGNLRS-ERLANLIGCCYEADERLLVAEFMPNETLAKHL--------------F 77
+ E + + + + + NL+G C + ++ E+ L ++L
Sbjct: 134 VSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIN 193
Query: 78 HWETQPMKWAMRLRVALYLAQALEYCSSKGRALYH-DLNAYRILFDKDGNPRLSSFGLMK 136
+ M + + LA+ +EY +S+ H DL A +L ++ +++ FGL +
Sbjct: 194 RVPEEQMTFKDLVSCTYQLARGMEYLASQK--CIHRDLAARNVLVTENNVMKIADFGLAR 251
Query: 137 NSRDGKSY--STNLAF----TPPEYMRTGRVTPESVVYSFGTMLLDLLS-GKH----IPP 185
+ + Y +TN PE + T +S V+SFG ++ ++ + G IP
Sbjct: 252 DINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPV 311
Query: 186 SHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERPNAKSLVISLMSL 245
L++ + + + EL + C + +RP K LV L +
Sbjct: 312 EELFKLLKEGHRMDKPANCTN---------ELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 362
Query: 246 QKEAEQ 251
Sbjct: 363 LTLTTN 368
|
| >3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A* Length = 297 | Back alignment and structure |
|---|
Score = 41.1 bits (97), Expect = 4e-04
Identities = 37/149 (24%), Positives = 65/149 (43%), Gaps = 16/149 (10%)
Query: 98 QALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLAFTP----P 153
QALE+ S ++ D+ + IL DG+ +L+ FG +S + + TP P
Sbjct: 127 QALEFLHSNQV-IHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAP 185
Query: 154 EYMRTGRVTPESVVYSFGTMLLDLLSGK----HIPPSHALDLIRSKNFLLLMDSALEGHF 209
E + P+ ++S G M ++++ G+ + P AL LI + L +
Sbjct: 186 EVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNP---EKL 242
Query: 210 SNDEGTELVRLASRCLQSEARERPNAKSL 238
S +RCL+ + +R +AK L
Sbjct: 243 SA----IFRDFLNRCLEMDVEKRGSAKEL 267
|
| >3zzw_A Tyrosine-protein kinase transmembrane receptor RO; transferase, neurotrophic tyrosine kinase, receptor-related NTRKR2; 2.90A {Homo sapiens} Length = 289 | Back alignment and structure |
|---|
Score = 41.0 bits (97), Expect = 4e-04
Identities = 30/163 (18%), Positives = 56/163 (34%), Gaps = 23/163 (14%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPN----ETLAKHLFHWETQPMKWAM 88
EA L+ + L+G + ++ + + E L H +
Sbjct: 60 RHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDR 119
Query: 89 RLRVALYLAQAL----------EYCSSKGRALYH-DLNAYRILFDKDGNPRLSSFGLMKN 137
++ AL + EY SS + H DL +L N ++S GL +
Sbjct: 120 TVKSALEPPDFVHLVAQIAAGMEYLSSHH--VVHKDLATRNVLVYDKLNVKISDLGLFRE 177
Query: 138 SRDGKSYSTNLA------FTPPEYMRTGRVTPESVVYSFGTML 174
Y + PE + G+ + +S ++S+G +L
Sbjct: 178 VYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVL 220
|
| >1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7 Length = 355 | Back alignment and structure |
|---|
Score = 40.7 bits (96), Expect = 6e-04
Identities = 36/164 (21%), Positives = 60/164 (36%), Gaps = 37/164 (22%)
Query: 91 RVALYLAQ---ALEYCSSKGRALYHDL---NAYRILFDKDGNPRLSSFGLMKNSRDGKSY 144
V +Y+ + ALE+ G +Y D+ N IL D +G+ L+ FGL K ++
Sbjct: 160 EVQIYVGEIVLALEHLHKLG-IIYRDIKLEN---ILLDSNGHVVLTDFGLSKEFVADETE 215
Query: 145 STNLAF--TPPEYMRTGRVTPESVVY------------SFGTMLLDLLSGKHIPPSHALD 190
F T EYM P+ V S G ++ +LL+G P
Sbjct: 216 RAY-DFCGT-IEYM-----APDIVRGGDSGHDKAVDWWSLGVLMYELLTGA--SPFTVDG 266
Query: 191 LIRSKNFLLLMDSALEG--HFSNDEGTELVRLASRCLQSEARER 232
+ + L+ + + L R L + ++R
Sbjct: 267 --EKNSQAEISRRILKSEPPYPQEMSALAKDLIQRLLMKDPKKR 308
|
| >4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A* Length = 437 | Back alignment and structure |
|---|
Score = 40.9 bits (96), Expect = 7e-04
Identities = 25/109 (22%), Positives = 48/109 (44%), Gaps = 11/109 (10%)
Query: 53 CCYEADERL-LVAEFMPNETLAKHLFHWETQ-PMKWAMRLRVALYLAQ---ALEYCSSKG 107
++ D L LV ++ L L +E + P + A YLA+ A++
Sbjct: 141 YAFQDDNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMA-----RFYLAEMVIAIDSVHQLH 195
Query: 108 RALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLAFTPPEYM 156
++ D+ IL D +G+ RL+ FG + + +++A P+Y+
Sbjct: 196 -YVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQSSVAVGTPDYI 243
|
| >3g51_A Ribosomal protein S6 kinase alpha-3; N-terminal kinase domain of P90 ribosomal S6 kinase 2, ATP- binding, nucleotide-binding, phosphoprotein; HET: ANP; 1.80A {Mus musculus} PDB: 2z7q_A* 2z7r_A* 2z7s_A* Length = 325 | Back alignment and structure |
|---|
Score = 40.2 bits (95), Expect = 7e-04
Identities = 36/114 (31%), Positives = 52/114 (45%), Gaps = 34/114 (29%)
Query: 91 RVALYLAQ---ALEYCSSKGRALYHDL---NAYRILFDKDGNPRLSSFGLMK-NSRDGKS 143
V YLA+ AL++ S G +Y DL N IL D++G+ +L+ FGL K + K
Sbjct: 127 DVKFYLAELALALDHLHSLG-IIYRDLKPEN---ILLDEEGHIKLTDFGLSKESIDHEKK 182
Query: 144 YSTNLAF--TPPEYMRTGRVTPESVVY----------SFGTMLLDLLSGKHIPP 185
+ F T EYM PE V SFG ++ ++L+G P
Sbjct: 183 AYS---FCGT-VEYM-----APEVVNRRGHTQSADWWSFGVLMFEMLTGT--LP 225
|
| >3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A* Length = 345 | Back alignment and structure |
|---|
Score = 40.3 bits (95), Expect = 8e-04
Identities = 36/150 (24%), Positives = 64/150 (42%), Gaps = 34/150 (22%)
Query: 53 CCYEADERL-LVAEFMPNETLAKHLFHWETQPMKWAMRLRVALYLAQ---ALEYCSSKGR 108
C++ + RL V E++ L H+ Q + Y A+ AL Y +G
Sbjct: 77 SCFQTESRLFFVIEYVNGGDLMFHM-----QRQRKLPEEHARFYSAEISLALNYLHERG- 130
Query: 109 ALYHDLNAYRILFDKDGNPRLSSFGLMK-NSRDGKSYSTNLAF--TPPEYMRTGRVTPES 165
+Y DL +L D +G+ +L+ +G+ K R G + ST F T P Y+ PE
Sbjct: 131 IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTST---FCGT-PNYI-----APEI 181
Query: 166 VVY----------SFGTMLLDLLSGKHIPP 185
+ + G ++ ++++G+ P
Sbjct: 182 LRGEDYGFSVDWWALGVLMFEMMAGR--SP 209
|
| >3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A Length = 290 | Back alignment and structure |
|---|
Score = 39.9 bits (94), Expect = 8e-04
Identities = 34/160 (21%), Positives = 66/160 (41%), Gaps = 20/160 (12%)
Query: 91 RVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLAF 150
++A+ + +ALE+ SK ++ D+ +L + G ++ FG+ D + + A
Sbjct: 113 KIAVSIVKALEHLHSKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDDVAKDID-AG 171
Query: 151 TPPEYMRTGRVTPESV---------VYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLM 201
P YM R+ PE ++S G +++L + P + + ++
Sbjct: 172 CKP-YMAPERINPELNQKGYSVKSDIWSLGITMIELAILR--FPYDSWGTPFQQLKQVVE 228
Query: 202 D---SALEGHFSNDEGTELVRLASRCLQSEARERPNAKSL 238
+ FS E V S+CL+ ++ERP L
Sbjct: 229 EPSPQLPADKFSA----EFVDFTSQCLKKNSKERPTYPEL 264
|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 424 | |||
| 3omv_A | 307 | RAF proto-oncogene serine/threonine-protein kinas; | 100.0 | |
| 4asz_A | 299 | BDNF/NT-3 growth factors receptor; transferase, TR | 100.0 | |
| 4aoj_A | 329 | High affinity nerve growth factor receptor; transf | 100.0 | |
| 4gt4_A | 308 | Tyrosine-protein kinase transmembrane receptor RO; | 100.0 | |
| 4b9d_A | 350 | Serine/threonine-protein kinase NEK1; transferase, | 100.0 | |
| 4g3f_A | 336 | NF-kappa-beta-inducing kinase; non-RD kinase, prot | 100.0 | |
| 2pzi_A | 681 | Probable serine/threonine-protein kinase PKNG; ATP | 100.0 | |
| 4fih_A | 346 | Serine/threonine-protein kinase PAK 4; kinase doma | 100.0 | |
| 3fpq_A | 290 | Serine/threonine-protein kinase WNK1; protein seri | 100.0 | |
| 4ase_A | 353 | Vascular endothelial growth factor receptor 2; tra | 100.0 | |
| 4fie_A | 423 | Serine/threonine-protein kinase PAK 4; kinase doma | 100.0 | |
| 4aw0_A | 311 | HPDK1, 3-phosphoinositide-dependent protein kinase | 100.0 | |
| 3hyh_A | 275 | Carbon catabolite-derepressing protein kinase; kin | 100.0 | |
| 3hmm_A | 303 | TGF-beta receptor type-1; ALK5, kinase, inhibitor, | 100.0 | |
| 3ubd_A | 304 | Ribosomal protein S6 kinase alpha-3; kinase-inhibi | 100.0 | |
| 4g31_A | 299 | Eukaryotic translation initiation factor 2-alpha; | 100.0 | |
| 4b99_A | 398 | Mitogen-activated protein kinase 7; transferase, i | 100.0 | |
| 4f9c_A | 361 | Cell division cycle 7-related protein kinase; Ser/ | 100.0 | |
| 3uto_A | 573 | Twitchin; kinase, muscle sarcomere, transferase; H | 100.0 | |
| 3v5w_A | 689 | G-protein coupled receptor kinase 2; inhibitor com | 100.0 | |
| 2qol_A | 373 | Ephrin receptor; receptor tyrosine kinase, juxtame | 100.0 | |
| 3p86_A | 309 | Serine/threonine-protein kinase CTR1; ETR1, ERS1, | 100.0 | |
| 3kul_A | 325 | Ephrin type-A receptor 8; ATP-binding, kinase, nuc | 100.0 | |
| 3s95_A | 310 | LIMK-1, LIM domain kinase 1; structural genomics, | 100.0 | |
| 4hcu_A | 269 | Tyrosine-protein kinase ITK/TSK; transferase-trans | 100.0 | |
| 1k9a_A | 450 | Carboxyl-terminal SRC kinase; COOH-terminal SRC ki | 100.0 | |
| 2psq_A | 370 | Fibroblast growth factor receptor 2; kinase domain | 100.0 | |
| 3cbl_A | 377 | C-FES, proto-oncogene tyrosine-protein kinase FES/ | 100.0 | |
| 3soc_A | 322 | Activin receptor type-2A; structural genomics cons | 100.0 | |
| 1opk_A | 495 | P150, C-ABL, proto-oncogene tyrosine-protein kinas | 100.0 | |
| 3fxz_A | 297 | Serine/threonine-protein kinase PAK 1; transferase | 100.0 | |
| 3gen_A | 283 | Tyrosine-protein kinase BTK; bruton'S tyrosine kin | 100.0 | |
| 3fe3_A | 328 | MAP/microtubule affinity-regulating kinase 3; seri | 100.0 | |
| 3lb7_A | 307 | RAF proto-oncogene serine/threonine-protein kinas; | 100.0 | |
| 3sxs_A | 268 | Cytoplasmic tyrosine-protein kinase BMX; transfera | 100.0 | |
| 2qkw_B | 321 | Protein kinase; three-helix bundle motif, AVRPTO-P | 100.0 | |
| 1qcf_A | 454 | Haematopoetic cell kinase (HCK); tyrosine kinase-i | 100.0 | |
| 3l9p_A | 367 | Anaplastic lymphoma kinase; kinase domain, ATP-bin | 100.0 | |
| 3tt0_A | 382 | Basic fibroblast growth factor receptor 1; kinase | 100.0 | |
| 3zgw_A | 347 | Maternal embryonic leucine zipper kinase; transfer | 100.0 | |
| 3kfa_A | 288 | Tyrosine-protein kinase ABL1; CML, drug resistance | 100.0 | |
| 3ugc_A | 295 | Tyrosine-protein kinase JAK2; small molecule inhib | 100.0 | |
| 1tki_A | 321 | Titin; serine kinase, muscle, autoinhibition; 2.00 | 100.0 | |
| 3kex_A | 325 | Receptor tyrosine-protein kinase ERBB-3; kinase do | 100.0 | |
| 1luf_A | 343 | Muscle-specific tyrosine kinase receptor MUSK; pho | 100.0 | |
| 2eva_A | 307 | TAK1 kinase - TAB1 chimera fusion protein; transfe | 100.0 | |
| 3poz_A | 327 | Epidermal growth factor receptor; kinase domain, a | 100.0 | |
| 3dtc_A | 271 | Mitogen-activated protein kinase kinase kinase 9; | 100.0 | |
| 3kmu_A | 271 | ILK, integrin-linked kinase; cell adhesion, ANK re | 100.0 | |
| 1fmk_A | 452 | C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros | 100.0 | |
| 3vhe_A | 359 | Vascular endothelial growth factor receptor 2; kin | 100.0 | |
| 4eqm_A | 294 | Protein kinase; transferase; HET: ANP; 3.00A {Stap | 100.0 | |
| 2yab_A | 361 | Death-associated protein kinase 2; apoptosis, tran | 100.0 | |
| 1mp8_A | 281 | Focal adhesion kinase 1; tyrosine protein kinase, | 100.0 | |
| 1o6l_A | 337 | RAC-beta serine/threonine protein kinase; protein | 100.0 | |
| 1mqb_A | 333 | Ephrin type-A receptor 2; tyrosine protein kinase, | 100.0 | |
| 3t9t_A | 267 | Tyrosine-protein kinase ITK/TSK; kinase domain, al | 100.0 | |
| 3uc3_A | 361 | Serine/threonine-protein kinase SRK2I; SNRK2, ABA | 100.0 | |
| 3lxp_A | 318 | Non-receptor tyrosine-protein kinase TYK2; JAK3, i | 100.0 | |
| 3soa_A | 444 | Calcium/calmodulin-dependent protein kinase type a | 100.0 | |
| 4fvq_A | 289 | Tyrosine-protein kinase JAK2; janus protein kinase | 100.0 | |
| 3q4u_A | 301 | Activin receptor type-1; structural genomics conso | 100.0 | |
| 1u59_A | 287 | Tyrosine-protein kinase ZAP-70; transferase; HET: | 100.0 | |
| 2y0a_A | 326 | Death-associated protein kinase 1; transferase, ca | 100.0 | |
| 2ivs_A | 314 | Proto-oncogene tyrosine-protein kinase receptor RE | 100.0 | |
| 3uim_A | 326 | Brassinosteroid insensitive 1-associated receptor; | 100.0 | |
| 2c30_A | 321 | Serine/threonine-protein kinase PAK 6; CRIB domain | 100.0 | |
| 2izr_A | 330 | Casein kinase I isoform gamma-3; serine/threonine- | 100.0 | |
| 1t46_A | 313 | HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom | 100.0 | |
| 1rjb_A | 344 | FL cytokine receptor; kinase, structure, autoinhib | 100.0 | |
| 2zv2_A | 298 | Calcium/calmodulin-dependent protein kinase kinas; | 100.0 | |
| 3pls_A | 298 | Macrophage-stimulating protein receptor; protein k | 100.0 | |
| 3qup_A | 323 | Tyrosine-protein kinase receptor TYRO3; protein ki | 100.0 | |
| 1qpc_A | 279 | LCK kinase; alpha beta fold, transferase; HET: PTR | 100.0 | |
| 1u5q_A | 348 | Serine/threonine protein kinase TAO2; transferase; | 100.0 | |
| 2bdw_A | 362 | Hypothetical protein K11E8.1D; kinase, calmodulin | 100.0 | |
| 1byg_A | 278 | CSK, protein (C-terminal SRC kinase); protein kina | 100.0 | |
| 1fot_A | 318 | TPK1 delta, CAMP-dependent protein kinase type 1; | 100.0 | |
| 2ozo_A | 613 | Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t | 100.0 | |
| 2h8h_A | 535 | Proto-oncogene tyrosine-protein kinase SRC; SRC ki | 100.0 | |
| 3c1x_A | 373 | Hepatocyte growth factor receptor; receptor tyrosi | 100.0 | |
| 4euu_A | 319 | Serine/threonine-protein kinase TBK1; ATP binding, | 100.0 | |
| 3cc6_A | 281 | Protein tyrosine kinase 2 beta; focal adhesion kin | 100.0 | |
| 3lxl_A | 327 | Tyrosine-protein kinase JAK3; TYK2, inflammation, | 100.0 | |
| 4f0f_A | 287 | Serine/threonine-protein kinase ROCO4; LRRK2, ATP- | 100.0 | |
| 1kob_A | 387 | Twitchin; kinase, intrasteric regulation; 2.30A {A | 100.0 | |
| 1rdq_E | 350 | PKA C-alpha, CAMP-dependent protein kinase, alpha- | 100.0 | |
| 2pvf_A | 334 | Fibroblast growth factor receptor 2; kinase domain | 100.0 | |
| 3og7_A | 289 | AKAP9-BRAF fusion protein; proto-oncogene, V600E, | 100.0 | |
| 3mdy_A | 337 | Bone morphogenetic protein receptor type-1B; compl | 100.0 | |
| 2x4f_A | 373 | Myosin light chain kinase family member 4; LUNG, b | 100.0 | |
| 3f66_A | 298 | Hepatocyte growth factor receptor; C-Met, protein | 100.0 | |
| 4e5w_A | 302 | Tyrosine-protein kinase JAK1; kinase domain, trans | 100.0 | |
| 4fr4_A | 384 | YANK1, serine/threonine-protein kinase 32A; struct | 100.0 | |
| 3txo_A | 353 | PKC-L, NPKC-ETA, protein kinase C ETA type; phosph | 100.0 | |
| 3c0i_A | 351 | Peripheral plasma membrane protein CASK; neurexin, | 100.0 | |
| 1xbb_A | 291 | Tyrosine-protein kinase SYK; gleevec, STI-571, ima | 100.0 | |
| 2nru_A | 307 | Interleukin-1 receptor-associated kinase 4; inhibi | 100.0 | |
| 3tki_A | 323 | Serine/threonine-protein kinase CHK1; cell checkpo | 100.0 | |
| 4dc2_A | 396 | Protein kinase C IOTA type; kinase, substrate, cel | 100.0 | |
| 1nxk_A | 400 | MAP kinase-activated protein kinase 2; MK2, phosph | 100.0 | |
| 3brb_A | 313 | Proto-oncogene tyrosine-protein kinase MER; ATP-bi | 100.0 | |
| 3o0g_A | 292 | Cell division protein kinase 5; kinase activator c | 100.0 | |
| 1fvr_A | 327 | Tyrosine-protein kinase TIE-2; tyrosine kinase, tr | 100.0 | |
| 3h4j_B | 336 | AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin | 100.0 | |
| 3op5_A | 364 | Serine/threonine-protein kinase VRK1; adenosine tr | 100.0 | |
| 3lzb_A | 327 | Epidermal growth factor receptor; epidermal growth | 100.0 | |
| 1csn_A | 298 | Casein kinase-1; phosphotransferase; HET: ATP; 2.0 | 100.0 | |
| 2i1m_A | 333 | Macrophage colony-stimulating factor 1 receptor; k | 100.0 | |
| 3gni_B | 389 | Strad alpha; kinase fold, pseudokinase, alpha heli | 100.0 | |
| 2wqm_A | 310 | Serine/threonine-protein kinase NEK7; ATP-binding, | 100.0 | |
| 3niz_A | 311 | Rhodanese family protein; structural genomics, str | 100.0 | |
| 1xjd_A | 345 | Protein kinase C, theta type; PKC-theta, ATP, AMP, | 100.0 | |
| 2w4o_A | 349 | Calcium/calmodulin-dependent protein kinase type I | 100.0 | |
| 1p4o_A | 322 | Insulin-like growth factor I receptor protein; IGF | 100.0 | |
| 4fl3_A | 635 | Tyrosine-protein kinase SYK; transferase; HET: ANP | 100.0 | |
| 3v8s_A | 410 | RHO-associated protein kinase 1; dimerization, myo | 100.0 | |
| 3qd2_B | 332 | Eukaryotic translation initiation factor 2-alpha; | 100.0 | |
| 3ork_A | 311 | Serine/threonine protein kinase; structural genomi | 100.0 | |
| 3a8x_A | 345 | Protein kinase C IOTA type; transferase; HET: TPO; | 100.0 | |
| 1ob3_A | 288 | PFPK5, cell division control protein 2 homolog; tr | 100.0 | |
| 2i0e_A | 353 | Protein kinase C-beta II; serine/threonine protein | 100.0 | |
| 3a62_A | 327 | Ribosomal protein S6 kinase beta-1; kinase domain, | 100.0 | |
| 3eqc_A | 360 | Dual specificity mitogen-activated protein kinase; | 100.0 | |
| 4aw2_A | 437 | Serine/threonine-protein kinase MRCK alpha; transf | 100.0 | |
| 2xir_A | 316 | Vascular endothelial growth factor receptor 2; ang | 100.0 | |
| 3llt_A | 360 | Serine/threonine kinase-1, pflammer; lammer kinase | 100.0 | |
| 2y94_A | 476 | 5'-AMP-activated protein kinase catalytic subunit; | 100.0 | |
| 3p1a_A | 311 | MYT1 kinase, membrane-associated tyrosine- and thr | 100.0 | |
| 2w1i_A | 326 | JAK2; chromosomal rearrangement, nucleotide-bindin | 100.0 | |
| 2yfx_A | 327 | Tyrosine-protein kinase receptor; nucleotide-bindi | 100.0 | |
| 2h34_A | 309 | Serine/threonine-protein kinase PKNE; apoenzyme, t | 100.0 | |
| 2a19_B | 284 | Interferon-induced, double-stranded RNA-activated | 100.0 | |
| 1x8b_A | 289 | WEE1HU, WEE1-like protein kinase; cell cycle, tran | 100.0 | |
| 2a2a_A | 321 | Death-associated protein kinase 2; autoinhibition, | 100.0 | |
| 4ejn_A | 446 | RAC-alpha serine/threonine-protein kinase; AKT1, a | 100.0 | |
| 2v62_A | 345 | Serine/threonine-protein kinase VRK2; transferase, | 100.0 | |
| 3g33_A | 308 | Cell division protein kinase 4; Ser/Thr protein ki | 100.0 | |
| 2vd5_A | 412 | DMPK protein; serine/threonine-protein kinase, kin | 100.0 | |
| 2acx_A | 576 | G protein-coupled receptor kinase 6; GRK, G transf | 100.0 | |
| 3gxj_A | 303 | TGF-beta receptor type-1; ALK5, kinase, inhibitor, | 100.0 | |
| 3fdn_A | 279 | Serine/threonine-protein kinase 6; aurora kinase i | 100.0 | |
| 3kk8_A | 284 | Calcium/calmodulin dependent protein kinase II; AT | 100.0 | |
| 3dls_A | 335 | PAS domain-containing serine/threonine-protein KI; | 100.0 | |
| 2pmi_A | 317 | Negative RE, cyclin-dependent protein kinase PHO85 | 100.0 | |
| 3kn6_A | 325 | Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1 | 100.0 | |
| 3a7i_A | 303 | MST3 kinase, serine/threonine kinase 24 (STE20 hom | 100.0 | |
| 3lm5_A | 327 | Serine/threonine-protein kinase 17B; STK17B, serin | 100.0 | |
| 2eue_A | 275 | Carbon catabolite derepressing protein kinase; kin | 100.0 | |
| 3c4z_A | 543 | Rhodopsin kinase; Ser/Thr kinase, RGS homology dom | 100.0 | |
| 3f3z_A | 277 | Calcium/calmodulin-dependent protein kinase with d | 100.0 | |
| 2r5t_A | 373 | Serine/threonine-protein kinase SGK1; AGC protein | 100.0 | |
| 2jii_A | 352 | Serine/threonine-protein kinase VRK3 molecule: VA | 100.0 | |
| 3g2f_A | 336 | Bone morphogenetic protein receptor type-2; kinase | 100.0 | |
| 3hko_A | 345 | Calcium/calmodulin-dependent protein kinase with d | 100.0 | |
| 2x7f_A | 326 | TRAF2 and NCK-interacting protein kinase; serine/t | 100.0 | |
| 3dbq_A | 343 | Dual specificity protein kinase TTK; MPS1 structur | 100.0 | |
| 1u46_A | 291 | ACK-1, activated CDC42 kinase 1; tyrosine kinase, | 100.0 | |
| 3cok_A | 278 | Serine/threonine-protein kinase PLK4; POLO-like ki | 100.0 | |
| 2zmd_A | 390 | Dual specificity protein kinase TTK; MPS1, T686A, | 100.0 | |
| 2vgo_A | 284 | Serine/threonine-protein kinase 12-A; nucleotide-b | 100.0 | |
| 2qr7_A | 342 | Ribosomal protein S6 kinase alpha-3; kinase domain | 100.0 | |
| 3is5_A | 285 | Calcium-dependent protein kinase; CDPK, structural | 100.0 | |
| 4agu_A | 311 | Cyclin-dependent kinase-like 1; transferase, phosp | 100.0 | |
| 1t4h_A | 290 | Serine/threonine-protein kinase WNK1; protein seri | 100.0 | |
| 3ttj_A | 464 | Mitogen-activated protein kinase 10; JNK3, protein | 100.0 | |
| 2owb_A | 335 | Serine/threonine-protein kinase PLK1; catalytic do | 100.0 | |
| 4eut_A | 396 | Serine/threonine-protein kinase TBK1; ATP binding, | 100.0 | |
| 1b6c_B | 342 | TGF-B superfamily receptor type I; complex (isomer | 100.0 | |
| 3mtl_A | 324 | Cell division protein kinase 16; pctaire1, indirub | 100.0 | |
| 2yex_A | 276 | Serine/threonine-protein kinase CHK1; transferase, | 100.0 | |
| 2rku_A | 294 | Serine/threonine-protein kinase PLK1; structure of | 100.0 | |
| 2clq_A | 295 | Mitogen-activated protein kinase kinase kinase 5; | 100.0 | |
| 2jam_A | 304 | Calcium/calmodulin-dependent protein kinase type 1 | 100.0 | |
| 3bhy_A | 283 | Death-associated protein kinase 3; death associate | 100.0 | |
| 3nyv_A | 484 | Calmodulin-domain protein kinase 1; serine/threoni | 100.0 | |
| 2ac3_A | 316 | MAP kinase-interacting serine/threonine kinase 2; | 100.0 | |
| 2buj_A | 317 | Serine/threonine-protein kinase 16; transferase, A | 100.0 | |
| 3mwu_A | 486 | Calmodulin-domain protein kinase 1; serine/threoni | 100.0 | |
| 2j0j_A | 656 | Focal adhesion kinase 1; cell migration, FERM, tra | 100.0 | |
| 3rp9_A | 458 | Mitogen-activated protein kinase; structural genom | 100.0 | |
| 3gbz_A | 329 | Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide- | 100.0 | |
| 2w5a_A | 279 | Serine/threonine-protein kinase NEK2; Ser/Thr prot | 100.0 | |
| 3oz6_A | 388 | Mitogen-activated protein kinase 1, serine/threon | 100.0 | |
| 3kvw_A | 429 | DYRK2, dual specificity tyrosine-phosphorylation-r | 100.0 | |
| 3lij_A | 494 | Calcium/calmodulin dependent protein kinase with A | 100.0 | |
| 1cm8_A | 367 | Phosphorylated MAP kinase P38-gamma; phosphorylati | 100.0 | |
| 3com_A | 314 | Serine/threonine-protein kinase 4; MST1, STE20-lik | 100.0 | |
| 2y7j_A | 365 | Phosphorylase B kinase gamma catalytic chain, test | 100.0 | |
| 3q5i_A | 504 | Protein kinase; CDPK, malaria, phosphotransferase, | 100.0 | |
| 3i6u_A | 419 | CDS1, serine/threonine-protein kinase CHK2; Ser/Th | 100.0 | |
| 1vzo_A | 355 | Ribosomal protein S6 kinase alpha 5; protein kinas | 100.0 | |
| 2y4i_B | 319 | KSR2, HKSR2, kinase suppressor of RAS 2; transfera | 100.0 | |
| 1ua2_A | 346 | CAK, cell division protein kinase 7; cell cycle, p | 100.0 | |
| 3uzp_A | 296 | CKI-delta, CKID, casein kinase I isoform delta; CK | 100.0 | |
| 2pml_X | 348 | PFPK7, Ser/Thr protein kinase; phosphorylati trans | 100.0 | |
| 1zy4_A | 303 | Serine/threonine-protein kinase GCN2; translation | 100.0 | |
| 3q60_A | 371 | ROP5B; pseudokinase, transferase; HET: ATP; 1.72A | 100.0 | |
| 4aaa_A | 331 | Cyclin-dependent kinase-like 2; transferase, phosp | 100.0 | |
| 2j7t_A | 302 | Serine/threonine-protein kinase 10; transferase, A | 100.0 | |
| 2wtk_C | 305 | Serine/threonine-protein kinase 11; transferase-me | 100.0 | |
| 2r3i_A | 299 | Cell division protein kinase 2; serine/threonine-p | 100.0 | |
| 4hgt_A | 296 | Casein kinase I isoform delta; CK1D, inhibitor, tr | 100.0 | |
| 1wak_A | 397 | Serine/threonine-protein kinase SPRK1; SRPK, trans | 100.0 | |
| 1z57_A | 339 | Dual specificity protein kinase CLK1; protein tyro | 100.0 | |
| 3e7e_A | 365 | HBUB1, BUB1A, mitotic checkpoint serine/threonine- | 100.0 | |
| 2vwi_A | 303 | Serine/threonine-protein kinase OSR1; STE kinase, | 100.0 | |
| 3sv0_A | 483 | Casein kinase I-like; typical kinase domain fold, | 100.0 | |
| 3ll6_A | 337 | Cyclin G-associated kinase; transferase, protein k | 100.0 | |
| 3mi9_A | 351 | Cell division protein kinase 9; P-TEFB, HIV-1, pro | 100.0 | |
| 2h6d_A | 276 | 5'-AMP-activated protein kinase catalytic subunit | 100.0 | |
| 2xrw_A | 371 | Mitogen-activated protein kinase 8; transcription, | 100.0 | |
| 3byv_A | 377 | Rhoptry kinase; malaria, transferase, structural g | 100.0 | |
| 3n9x_A | 432 | Phosphotransferase; malaria kinase, structural gen | 100.0 | |
| 1phk_A | 298 | Phosphorylase kinase; glycogen metabolism, transfe | 100.0 | |
| 2ycf_A | 322 | Serine/threonine-protein kinase CHK2; transferase, | 100.0 | |
| 3pfq_A | 674 | PKC-B, PKC-beta, protein kinase C beta type; phosp | 100.0 | |
| 3fme_A | 290 | Dual specificity mitogen-activated protein kinase; | 100.0 | |
| 3an0_A | 340 | Dual specificity mitogen-activated protein kinase; | 100.0 | |
| 3nsz_A | 330 | CK II alpha, casein kinase II subunit alpha; inhib | 100.0 | |
| 2fst_X | 367 | Mitogen-activated protein kinase 14; active mutant | 100.0 | |
| 3fhr_A | 336 | MAP kinase-activated protein kinase 3; kinase-inhi | 100.0 | |
| 1q8y_A | 373 | SR protein kinase; transferase; HET: ADP ADE; 2.05 | 100.0 | |
| 4exu_A | 371 | Mitogen-activated protein kinase 13; P38 kinase, t | 100.0 | |
| 3qyz_A | 364 | Mitogen-activated protein kinase 1; transferase, s | 100.0 | |
| 3eb0_A | 383 | Putative uncharacterized protein; kinase cryptospo | 100.0 | |
| 3e3p_A | 360 | Protein kinase, putative glycogen synthase kinase; | 100.0 | |
| 1j1b_A | 420 | Glycogen synthase kinase-3 beta; complex, TAU, AMP | 100.0 | |
| 2b9h_A | 353 | MAP kinase FUS3, mitogen-activated protein kinase | 100.0 | |
| 3coi_A | 353 | Mitogen-activated protein kinase 13; P38D, P38delt | 100.0 | |
| 1blx_A | 326 | Cyclin-dependent kinase 6; inhibitor protein, cycl | 100.0 | |
| 2eu9_A | 355 | Dual specificity protein kinase CLK3; kinase domai | 100.0 | |
| 2wei_A | 287 | Calmodulin-domain protein kinase 1, putative; nucl | 100.0 | |
| 3rgf_A | 405 | Cyclin-dependent kinase 8; protein kinase complex, | 100.0 | |
| 3aln_A | 327 | Dual specificity mitogen-activated protein kinase; | 100.0 | |
| 2vx3_A | 382 | Dual specificity tyrosine-phosphorylation- regula | 100.0 | |
| 4e7w_A | 394 | Glycogen synthase kinase 3; GSK3, PTyr195, transfe | 100.0 | |
| 3pg1_A | 362 | Mitogen-activated protein kinase, putative (MAP K | 100.0 | |
| 3cek_A | 313 | Dual specificity protein kinase TTK; HMPS1, PYT, E | 100.0 | |
| 2i6l_A | 320 | Mitogen-activated protein kinase 6; MAPK6, ERK3, e | 100.0 | |
| 2rio_A | 434 | Serine/threonine-protein kinase/endoribonuclease I | 100.0 | |
| 3p23_A | 432 | Serine/threonine-protein kinase/endoribonuclease; | 100.0 | |
| 3a99_A | 320 | Proto-oncogene serine/threonine-protein kinase PI; | 100.0 | |
| 2dyl_A | 318 | Dual specificity mitogen-activated protein kinase | 100.0 | |
| 2iwi_A | 312 | Serine/threonine-protein kinase PIM-2; nucleotide- | 100.0 | |
| 3uqc_A | 286 | Probable conserved transmembrane protein; structur | 100.0 | |
| 3qa8_A | 676 | MGC80376 protein; kinase ubiquitin-like domain, ph | 100.0 | |
| 3dzo_A | 413 | Rhoptry kinase domain; parasitic disease, transfer | 100.0 | |
| 3m2w_A | 299 | MAP kinase-activated protein kinase 2; small molec | 100.0 | |
| 2vuw_A | 336 | Serine/threonine-protein kinase haspin; cell cycle | 100.0 | |
| 4azs_A | 569 | Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15 | 100.0 | |
| 3en9_A | 540 | Glycoprotease, O-sialoglycoprotein endopeptidase/p | 99.94 | |
| 1zar_A | 282 | RIO2 kinase; serine kinase, winged-helix, RIO doma | 99.86 | |
| 4gco_A | 126 | Protein STI-1; structural genomics, PSI-biology, m | 99.84 | |
| 2hr2_A | 159 | Hypothetical protein; alpha-alpha superhelix fold, | 99.82 | |
| 3gyz_A | 151 | Chaperone protein IPGC; asymmetric homodimer, tetr | 99.77 | |
| 1zth_A | 258 | RIO1 serine protein kinase; ribosome biogenesis, r | 99.76 | |
| 4gcn_A | 127 | Protein STI-1; structural genomics, PSI-biology, m | 99.75 | |
| 3upv_A | 126 | Heat shock protein STI1; TPR-fold, adaptor protein | 99.73 | |
| 3rkv_A | 162 | Putative peptidylprolyl isomerase; structural geno | 99.73 | |
| 2vgx_A | 148 | Chaperone SYCD; alternative dimer assembly, tetrat | 99.7 | |
| 3sz7_A | 164 | HSC70 cochaperone (SGT); TPR domain, GET4, GET5, G | 99.69 | |
| 2xcb_A | 142 | PCRH, regulatory protein PCRH; protein transport, | 99.68 | |
| 4ga2_A | 150 | E3 SUMO-protein ligase ranbp2; TPR motif, nuclear | 99.68 | |
| 1hxi_A | 121 | PEX5, peroxisome targeting signal 1 receptor PEX5; | 99.68 | |
| 3q49_B | 137 | STIP1 homology and U box-containing protein 1; E3 | 99.63 | |
| 1zu2_A | 158 | Mitochondrial import receptor subunit TOM20-3; TPR | 99.62 | |
| 3urz_A | 208 | Uncharacterized protein; tetratricopeptide repeats | 99.61 | |
| 2fbn_A | 198 | 70 kDa peptidylprolyl isomerase, putative; sulfur | 99.59 | |
| 4gyw_A | 723 | UDP-N-acetylglucosamine--peptide N- acetylglucosam | 99.58 | |
| 1elw_A | 118 | TPR1-domain of HOP; HOP, TPR-domain, peptide-compl | 99.58 | |
| 2lni_A | 133 | Stress-induced-phosphoprotein 1; structural genomi | 99.58 | |
| 1p5q_A | 336 | FKBP52, FK506-binding protein 4; isomerase; 2.80A | 99.58 | |
| 4gyi_A | 397 | RIO2 kinase; protein kinase, ADP complex, phosphoa | 99.57 | |
| 4ga2_A | 150 | E3 SUMO-protein ligase ranbp2; TPR motif, nuclear | 99.57 | |
| 1kt0_A | 457 | FKBP51, 51 kDa FK506-binding protein; FKBP-like pp | 99.57 | |
| 2c2l_A | 281 | CHIP, carboxy terminus of HSP70-interacting protei | 99.57 | |
| 3vtx_A | 184 | MAMA; tetratricopeptide repeats (TPR) containing p | 99.56 | |
| 2dba_A | 148 | Smooth muscle cell associated protein-1, isoform 2 | 99.55 | |
| 2pl2_A | 217 | Hypothetical conserved protein TTC0263; TPR, prote | 99.55 | |
| 1a17_A | 166 | Serine/threonine protein phosphatase 5; hydrolase, | 99.55 | |
| 1ihg_A | 370 | Cyclophilin 40; ppiase immunophilin tetratricopept | 99.54 | |
| 2xev_A | 129 | YBGF; tetratricopeptide, alpha-helical, metal bind | 99.54 | |
| 4gyw_A | 723 | UDP-N-acetylglucosamine--peptide N- acetylglucosam | 99.54 | |
| 2if4_A | 338 | ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, | 99.53 | |
| 2kck_A | 112 | TPR repeat; tetratricopeptide repeat, structural g | 99.53 | |
| 2vyi_A | 131 | SGTA protein; chaperone, TPR repeat, phosphoprotei | 99.53 | |
| 3k9i_A | 117 | BH0479 protein; putative protein binding protein, | 99.53 | |
| 4i17_A | 228 | Hypothetical protein; TPR repeats protein, structu | 99.52 | |
| 2h6f_A | 382 | Protein farnesyltransferase/geranylgeranyltransfer | 99.51 | |
| 2h6f_A | 382 | Protein farnesyltransferase/geranylgeranyltransfer | 99.51 | |
| 3urz_A | 208 | Uncharacterized protein; tetratricopeptide repeats | 99.5 | |
| 2pl2_A | 217 | Hypothetical conserved protein TTC0263; TPR, prote | 99.49 | |
| 1elr_A | 131 | TPR2A-domain of HOP; HOP, TPR-domain, peptide-comp | 99.48 | |
| 1na0_A | 125 | Designed protein CTPR3; de novo protein; HET: IPT; | 99.46 | |
| 3vtx_A | 184 | MAMA; tetratricopeptide repeats (TPR) containing p | 99.45 | |
| 1wao_1 | 477 | Serine/threonine protein phosphatase 5; hydrolase, | 99.45 | |
| 4i17_A | 228 | Hypothetical protein; TPR repeats protein, structu | 99.45 | |
| 1hh8_A | 213 | P67PHOX, NCF-2, neutrophil cytosol factor 2; cell | 99.45 | |
| 2e2e_A | 177 | Formate-dependent nitrite reductase complex NRFG; | 99.45 | |
| 2l6j_A | 111 | TPR repeat-containing protein associated with HSP; | 99.44 | |
| 2kat_A | 115 | Uncharacterized protein; NESG, structure, structur | 99.43 | |
| 3gyz_A | 151 | Chaperone protein IPGC; asymmetric homodimer, tetr | 99.42 | |
| 1hh8_A | 213 | P67PHOX, NCF-2, neutrophil cytosol factor 2; cell | 99.39 | |
| 1xnf_A | 275 | Lipoprotein NLPI; TPR, tetratricopeptide, structur | 99.39 | |
| 3uq3_A | 258 | Heat shock protein STI1; HSP90, peptide binding, c | 99.36 | |
| 3qky_A | 261 | Outer membrane assembly lipoprotein YFIO; membrane | 99.36 | |
| 4gco_A | 126 | Protein STI-1; structural genomics, PSI-biology, m | 99.35 | |
| 4eqf_A | 365 | PEX5-related protein; accessory protein, tetratric | 99.34 | |
| 2fo7_A | 136 | Synthetic consensus TPR protein; tetratricopeptide | 99.34 | |
| 2pzi_A | 681 | Probable serine/threonine-protein kinase PKNG; ATP | 99.33 | |
| 3ma5_A | 100 | Tetratricopeptide repeat domain protein; NESG, str | 99.32 | |
| 2kc7_A | 99 | BFR218_protein; tetratricopeptide repeat, all-alph | 99.32 | |
| 2yhc_A | 225 | BAMD, UPF0169 lipoprotein YFIO; essential BAM comp | 99.32 | |
| 2fo7_A | 136 | Synthetic consensus TPR protein; tetratricopeptide | 99.32 | |
| 4eqf_A | 365 | PEX5-related protein; accessory protein, tetratric | 99.32 | |
| 2vsy_A | 568 | XCC0866; transferase, glycosyl transferase, GT-B, | 99.31 | |
| 3as5_A | 186 | MAMA; tetratricopeptide repeats (TPR) containing p | 99.31 | |
| 2r5s_A | 176 | Uncharacterized protein VP0806; APC090868.1, vibri | 99.31 | |
| 2vgx_A | 148 | Chaperone SYCD; alternative dimer assembly, tetrat | 99.31 | |
| 3tm0_A | 263 | Aminoglycoside 3'-phosphotransferase; protein kina | 99.31 | |
| 3qou_A | 287 | Protein YBBN; thioredoxin-like fold, tetratricopep | 99.3 | |
| 3ieg_A | 359 | DNAJ homolog subfamily C member 3; TPR motif, chap | 99.3 | |
| 2q7f_A | 243 | YRRB protein; TPR, protein binding; 2.49A {Bacillu | 99.29 | |
| 4abn_A | 474 | Tetratricopeptide repeat protein 5; P53 cofactor, | 99.27 | |
| 4abn_A | 474 | Tetratricopeptide repeat protein 5; P53 cofactor, | 99.27 | |
| 3as5_A | 186 | MAMA; tetratricopeptide repeats (TPR) containing p | 99.27 | |
| 1fch_A | 368 | Peroxisomal targeting signal 1 receptor; protein-p | 99.27 | |
| 1na3_A | 91 | Designed protein CTPR2; de novo protein; HET: IPT; | 99.27 | |
| 2y4t_A | 450 | DNAJ homolog subfamily C member 3; chaperone, endo | 99.26 | |
| 1fch_A | 368 | Peroxisomal targeting signal 1 receptor; protein-p | 99.26 | |
| 2gw1_A | 514 | Mitochondrial precursor proteins import receptor; | 99.26 | |
| 2e2e_A | 177 | Formate-dependent nitrite reductase complex NRFG; | 99.26 | |
| 3uq3_A | 258 | Heat shock protein STI1; HSP90, peptide binding, c | 99.25 | |
| 2q7f_A | 243 | YRRB protein; TPR, protein binding; 2.49A {Bacillu | 99.25 | |
| 3fp2_A | 537 | TPR repeat-containing protein YHR117W; TOM71, mito | 99.25 | |
| 4gcn_A | 127 | Protein STI-1; structural genomics, PSI-biology, m | 99.24 | |
| 3u4t_A | 272 | TPR repeat-containing protein; structural genomics | 99.24 | |
| 3qky_A | 261 | Outer membrane assembly lipoprotein YFIO; membrane | 99.24 | |
| 2ho1_A | 252 | Type 4 fimbrial biogenesis protein PILF; type IV p | 99.23 | |
| 1w3b_A | 388 | UDP-N-acetylglucosamine--peptide N-acetylglucosami | 99.23 | |
| 3mkr_A | 291 | Coatomer subunit epsilon; tetratricopeptide repeat | 99.23 | |
| 2vq2_A | 225 | PILW, putative fimbrial biogenesis and twitching m | 99.23 | |
| 1p5q_A | 336 | FKBP52, FK506-binding protein 4; isomerase; 2.80A | 99.22 | |
| 3u4t_A | 272 | TPR repeat-containing protein; structural genomics | 99.22 | |
| 3ieg_A | 359 | DNAJ homolog subfamily C member 3; TPR motif, chap | 99.22 | |
| 1qqe_A | 292 | Vesicular transport protein SEC17; helix-turn-heli | 99.22 | |
| 2ho1_A | 252 | Type 4 fimbrial biogenesis protein PILF; type IV p | 99.21 | |
| 1w3b_A | 388 | UDP-N-acetylglucosamine--peptide N-acetylglucosami | 99.21 | |
| 2xcb_A | 142 | PCRH, regulatory protein PCRH; protein transport, | 99.21 | |
| 3cv0_A | 327 | Peroxisome targeting signal 1 receptor PEX5; TPR m | 99.2 | |
| 2vsy_A | 568 | XCC0866; transferase, glycosyl transferase, GT-B, | 99.2 | |
| 3cv0_A | 327 | Peroxisome targeting signal 1 receptor PEX5; TPR m | 99.2 | |
| 2vq2_A | 225 | PILW, putative fimbrial biogenesis and twitching m | 99.18 | |
| 1a17_A | 166 | Serine/threonine protein phosphatase 5; hydrolase, | 99.18 | |
| 1qqe_A | 292 | Vesicular transport protein SEC17; helix-turn-heli | 99.18 | |
| 2y4t_A | 450 | DNAJ homolog subfamily C member 3; chaperone, endo | 99.17 | |
| 3hym_B | 330 | Cell division cycle protein 16 homolog; APC, anaph | 99.17 | |
| 2yhc_A | 225 | BAMD, UPF0169 lipoprotein YFIO; essential BAM comp | 99.16 | |
| 3hym_B | 330 | Cell division cycle protein 16 homolog; APC, anaph | 99.16 | |
| 1xnf_A | 275 | Lipoprotein NLPI; TPR, tetratricopeptide, structur | 99.15 | |
| 3dxp_A | 359 | Putative acyl-COA dehydrogenase; protein kinase-li | 99.14 | |
| 3mkr_A | 291 | Coatomer subunit epsilon; tetratricopeptide repeat | 99.13 | |
| 1wao_1 | 477 | Serine/threonine protein phosphatase 5; hydrolase, | 99.13 | |
| 3dra_A | 306 | Protein farnesyltransferase/geranylgeranyltransfer | 99.12 | |
| 2lni_A | 133 | Stress-induced-phosphoprotein 1; structural genomi | 99.11 | |
| 2l6j_A | 111 | TPR repeat-containing protein associated with HSP; | 99.09 | |
| 3fp2_A | 537 | TPR repeat-containing protein YHR117W; TOM71, mito | 99.07 | |
| 2if4_A | 338 | ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, | 99.07 | |
| 1na3_A | 91 | Designed protein CTPR2; de novo protein; HET: IPT; | 99.06 | |
| 3upv_A | 126 | Heat shock protein STI1; TPR-fold, adaptor protein | 99.06 | |
| 1kt0_A | 457 | FKBP51, 51 kDa FK506-binding protein; FKBP-like pp | 99.03 | |
| 2ond_A | 308 | Cleavage stimulation factor 77 kDa subunit; HAT do | 99.03 | |
| 3edt_B | 283 | KLC 2, kinesin light chain 2; superhelical, struct | 99.03 | |
| 3u3w_A | 293 | Transcriptional activator PLCR protein; ternary co | 99.03 | |
| 2fbn_A | 198 | 70 kDa peptidylprolyl isomerase, putative; sulfur | 99.03 | |
| 3k9i_A | 117 | BH0479 protein; putative protein binding protein, | 99.02 | |
| 2xpi_A | 597 | Anaphase-promoting complex subunit CUT9; cell cycl | 99.02 | |
| 2vyi_A | 131 | SGTA protein; chaperone, TPR repeat, phosphoprotei | 99.02 | |
| 1nd4_A | 264 | Aminoglycoside 3'-phosphotransferase; protein kina | 99.02 | |
| 2qfc_A | 293 | PLCR protein; TPR, HTH, transcription regulation; | 99.01 | |
| 3edt_B | 283 | KLC 2, kinesin light chain 2; superhelical, struct | 99.01 | |
| 4g1t_A | 472 | Interferon-induced protein with tetratricopeptide | 99.01 | |
| 2r5s_A | 176 | Uncharacterized protein VP0806; APC090868.1, vibri | 99.01 | |
| 2hr2_A | 159 | Hypothetical protein; alpha-alpha superhelix fold, | 99.0 | |
| 2qfc_A | 293 | PLCR protein; TPR, HTH, transcription regulation; | 99.0 | |
| 1dce_A | 567 | Protein (RAB geranylgeranyltransferase alpha subun | 99.0 | |
| 2ifu_A | 307 | Gamma-SNAP; membrane fusion, snare complex disasse | 98.99 | |
| 3sz7_A | 164 | HSC70 cochaperone (SGT); TPR domain, GET4, GET5, G | 98.99 | |
| 1ihg_A | 370 | Cyclophilin 40; ppiase immunophilin tetratricopept | 98.99 | |
| 3ro3_A | 164 | PINS homolog, G-protein-signaling modulator 2; asy | 98.99 | |
| 3qou_A | 287 | Protein YBBN; thioredoxin-like fold, tetratricopep | 98.99 | |
| 1hxi_A | 121 | PEX5, peroxisome targeting signal 1 receptor PEX5; | 98.99 | |
| 3dra_A | 306 | Protein farnesyltransferase/geranylgeranyltransfer | 98.99 | |
| 2kck_A | 112 | TPR repeat; tetratricopeptide repeat, structural g | 98.98 | |
| 3q7a_A | 349 | Farnesyltransferase alpha subunit; protein prenylt | 98.98 | |
| 3nf1_A | 311 | KLC 1, kinesin light chain 1; TPR, structural geno | 98.98 | |
| 2ifu_A | 307 | Gamma-SNAP; membrane fusion, snare complex disasse | 98.98 | |
| 3rkv_A | 162 | Putative peptidylprolyl isomerase; structural geno | 98.97 | |
| 3u3w_A | 293 | Transcriptional activator PLCR protein; ternary co | 98.97 | |
| 3ro2_A | 338 | PINS homolog, G-protein-signaling modulator 2; TPR | 98.97 | |
| 2ond_A | 308 | Cleavage stimulation factor 77 kDa subunit; HAT do | 98.97 | |
| 4a1s_A | 411 | PINS, partner of inscuteable; cell cycle, LGN, mit | 98.96 | |
| 3ulq_A | 383 | Response regulator aspartate phosphatase F; tetrat | 98.96 | |
| 1ouv_A | 273 | Conserved hypothetical secreted protein; TPR repea | 98.96 | |
| 2gw1_A | 514 | Mitochondrial precursor proteins import receptor; | 98.96 | |
| 3bee_A | 93 | Putative YFRE protein; putaive YFRE protein, struc | 98.94 | |
| 2xpi_A | 597 | Anaphase-promoting complex subunit CUT9; cell cycl | 98.94 | |
| 3q49_B | 137 | STIP1 homology and U box-containing protein 1; E3 | 98.94 | |
| 2kc7_A | 99 | BFR218_protein; tetratricopeptide repeat, all-alph | 98.93 | |
| 4f3v_A | 282 | ESX-1 secretion system protein ECCA1; tetratricope | 98.93 | |
| 1zu2_A | 158 | Mitochondrial import receptor subunit TOM20-3; TPR | 98.93 | |
| 3sg8_A | 304 | APH(2'')-ID; antibiotic resistance enzyme, transfe | 98.93 | |
| 3gw4_A | 203 | Uncharacterized protein; structural genomics, PSI- | 98.92 | |
| 3sf4_A | 406 | G-protein-signaling modulator 2; tetratricopeptide | 98.92 | |
| 3ulq_A | 383 | Response regulator aspartate phosphatase F; tetrat | 98.92 | |
| 3ma5_A | 100 | Tetratricopeptide repeat domain protein; NESG, str | 98.92 | |
| 1pc2_A | 152 | Mitochondria fission protein; unknown function; NM | 98.91 | |
| 1dce_A | 567 | Protein (RAB geranylgeranyltransferase alpha subun | 98.91 | |
| 3ro3_A | 164 | PINS homolog, G-protein-signaling modulator 2; asy | 98.9 | |
| 3n71_A | 490 | Histone lysine methyltransferase SMYD1; heart deve | 98.89 | |
| 3q15_A | 378 | PSP28, response regulator aspartate phosphatase H; | 98.89 | |
| 3nf1_A | 311 | KLC 1, kinesin light chain 1; TPR, structural geno | 98.88 | |
| 4g1t_A | 472 | Interferon-induced protein with tetratricopeptide | 98.88 | |
| 1na0_A | 125 | Designed protein CTPR3; de novo protein; HET: IPT; | 98.87 | |
| 2c2l_A | 281 | CHIP, carboxy terminus of HSP70-interacting protei | 98.85 | |
| 3dss_A | 331 | Geranylgeranyl transferase type-2 subunit alpha; p | 98.85 | |
| 3qww_A | 433 | SET and MYND domain-containing protein 2; methyltr | 98.85 | |
| 1elw_A | 118 | TPR1-domain of HOP; HOP, TPR-domain, peptide-compl | 98.84 | |
| 3q7a_A | 349 | Farnesyltransferase alpha subunit; protein prenylt | 98.82 | |
| 3dss_A | 331 | Geranylgeranyl transferase type-2 subunit alpha; p | 98.81 | |
| 2dba_A | 148 | Smooth muscle cell associated protein-1, isoform 2 | 98.81 | |
| 1ouv_A | 273 | Conserved hypothetical secreted protein; TPR repea | 98.8 | |
| 3sf4_A | 406 | G-protein-signaling modulator 2; tetratricopeptide | 98.79 | |
| 2v5f_A | 104 | Prolyl 4-hydroxylase subunit alpha-1; endoplasmic | 98.79 | |
| 4a1s_A | 411 | PINS, partner of inscuteable; cell cycle, LGN, mit | 98.78 | |
| 3q15_A | 378 | PSP28, response regulator aspartate phosphatase H; | 98.77 | |
| 2xev_A | 129 | YBGF; tetratricopeptide, alpha-helical, metal bind | 98.77 | |
| 3gw4_A | 203 | Uncharacterized protein; structural genomics, PSI- | 98.75 | |
| 2kat_A | 115 | Uncharacterized protein; NESG, structure, structur | 98.75 | |
| 3rjv_A | 212 | Putative SEL1 repeat protein; alpha-alpha superhel | 98.75 | |
| 3ly7_A | 372 | Transcriptional activator CADC; alpha/beta domain, | 98.74 | |
| 3ro2_A | 338 | PINS homolog, G-protein-signaling modulator 2; TPR | 98.73 | |
| 3qwp_A | 429 | SET and MYND domain-containing protein 3; SMYD3,SE | 98.71 | |
| 3rjv_A | 212 | Putative SEL1 repeat protein; alpha-alpha superhel | 98.68 | |
| 1elr_A | 131 | TPR2A-domain of HOP; HOP, TPR-domain, peptide-comp | 98.64 | |
| 3r70_A | 320 | Aminoglycoside phosphotransferase; structural geno | 98.64 | |
| 1klx_A | 138 | Cysteine rich protein B; structural genomics, heli | 98.63 | |
| 2ooe_A | 530 | Cleavage stimulation factor 77 kDa subunit; HAT do | 98.59 | |
| 4f3v_A | 282 | ESX-1 secretion system protein ECCA1; tetratricope | 98.57 | |
| 1hz4_A | 373 | MALT regulatory protein; two-helix bundles, helix | 98.51 | |
| 2ooe_A | 530 | Cleavage stimulation factor 77 kDa subunit; HAT do | 98.5 | |
| 3tdw_A | 306 | Gentamicin resistance protein; kinase, phosphoryl | 98.49 | |
| 1hz4_A | 373 | MALT regulatory protein; two-helix bundles, helix | 98.49 | |
| 4gkh_A | 272 | Aminoglycoside 3'-phosphotransferase APHA1-IAB; py | 98.47 | |
| 3u64_A | 301 | Protein TP_0956; tetratrico peptide repeat, protei | 98.44 | |
| 2v5f_A | 104 | Prolyl 4-hydroxylase subunit alpha-1; endoplasmic | 98.4 | |
| 3n71_A | 490 | Histone lysine methyltransferase SMYD1; heart deve | 98.31 | |
| 2xm6_A | 490 | Protein corresponding to locus C5321 from CFT073 s | 98.3 | |
| 3e4b_A | 452 | ALGK; tetratricopeptide repeat, superhelix, algina | 98.3 | |
| 3bee_A | 93 | Putative YFRE protein; putaive YFRE protein, struc | 98.29 | |
| 1xi4_A | 1630 | Clathrin heavy chain; alpha-ZIG-ZAG, beta-propelle | 98.27 | |
| 2yle_A | 229 | Protein spire homolog 1; actin-binding protein, ac | 98.25 | |
| 1klx_A | 138 | Cysteine rich protein B; structural genomics, heli | 98.22 | |
| 2xm6_A | 490 | Protein corresponding to locus C5321 from CFT073 s | 98.22 | |
| 1nzn_A | 126 | CGI-135 protein, fission protein FIS1P; TPR, unkno | 98.21 | |
| 1pc2_A | 152 | Mitochondria fission protein; unknown function; NM | 98.18 | |
| 3ovc_A | 362 | Hygromycin-B 4-O-kinase; aminoglycoside phosphotra | 98.18 | |
| 3ats_A | 357 | Putative uncharacterized protein; hypothetical pro | 98.16 | |
| 4b4t_Q | 434 | 26S proteasome regulatory subunit RPN6; hydrolase, | 98.07 | |
| 3mv2_B | 310 | Coatomer subunit epsilon; vesicular membrane coat | 97.98 | |
| 3d1u_A | 288 | Putative fructosamine-3-kinase; YP_290396.1, struc | 97.98 | |
| 3e4b_A | 452 | ALGK; tetratricopeptide repeat, superhelix, algina | 97.98 | |
| 1b89_A | 449 | Protein (clathrin heavy chain); triskelion, coated | 97.97 | |
| 3mv2_B | 310 | Coatomer subunit epsilon; vesicular membrane coat | 97.97 | |
| 1xi4_A | 1630 | Clathrin heavy chain; alpha-ZIG-ZAG, beta-propelle | 97.96 | |
| 3ffl_A | 167 | Anaphase-promoting complex subunit 7; tetratricope | 97.92 | |
| 4b4t_Q | 434 | 26S proteasome regulatory subunit RPN6; hydrolase, | 97.9 | |
| 3u64_A | 301 | Protein TP_0956; tetratrico peptide repeat, protei | 97.75 | |
| 2q83_A | 346 | YTAA protein; 2635576, structural genomics, joint | 97.73 | |
| 2olc_A | 397 | MTR kinase, methylthioribose kinase; kinase ADP-2H | 97.63 | |
| 1b89_A | 449 | Protein (clathrin heavy chain); triskelion, coated | 97.6 | |
| 3jr1_A | 312 | Putative fructosamine-3-kinase; YP_719053.1, struc | 97.54 | |
| 3o48_A | 134 | Mitochondria fission 1 protein; tetratricopeptide | 97.52 | |
| 1y8m_A | 144 | FIS1; mitochondria, unknown function; NMR {Sacchar | 97.48 | |
| 3qwp_A | 429 | SET and MYND domain-containing protein 3; SMYD3,SE | 97.44 | |
| 1nzn_A | 126 | CGI-135 protein, fission protein FIS1P; TPR, unkno | 97.43 | |
| 3ly7_A | 372 | Transcriptional activator CADC; alpha/beta domain, | 97.4 | |
| 3qww_A | 433 | SET and MYND domain-containing protein 2; methyltr | 97.37 | |
| 2pyw_A | 420 | Uncharacterized protein; 5-methylthioribose kinase | 97.29 | |
| 2ff4_A | 388 | Probable regulatory protein EMBR; winged-helix, te | 97.22 | |
| 3dxq_A | 301 | Choline/ethanolamine kinase family protein; NP_106 | 97.21 | |
| 1y8m_A | 144 | FIS1; mitochondria, unknown function; NMR {Sacchar | 97.08 | |
| 3csv_A | 333 | Aminoglycoside phosphotransferase; YP_614837.1, ph | 97.07 | |
| 3o48_A | 134 | Mitochondria fission 1 protein; tetratricopeptide | 97.03 | |
| 4e6h_A | 679 | MRNA 3'-END-processing protein RNA14; HAT domain, | 96.79 | |
| 3ffl_A | 167 | Anaphase-promoting complex subunit 7; tetratricope | 96.78 | |
| 3feg_A | 379 | Choline/ethanolamine kinase; non-protein kinase, c | 96.65 | |
| 4e6h_A | 679 | MRNA 3'-END-processing protein RNA14; HAT domain, | 96.61 | |
| 3c5i_A | 369 | Choline kinase; choline, kinase, malaria, transfer | 96.52 |
| >3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.5e-57 Score=415.76 Aligned_cols=243 Identities=18% Similarity=0.234 Sum_probs=196.6
Q ss_pred CCCcccceeeeecceecccccCC---CchhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHhHhcc
Q 014478 2 GGRCSKFSICWFHCHLKSSVLES---SDLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFH 78 (424)
Q Consensus 2 G~~g~v~~~~~~~~~v~~~~~~~---~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~ 78 (424)
||||.||++.+.+ .|++|++.. +....+.|.+|+++|++++|||||+++|+|.+ +..+||||||+||+|.++|..
T Consensus 47 G~fG~Vy~~~~~~-~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~-~~~~iVmEy~~gGsL~~~l~~ 124 (307)
T 3omv_A 47 GSFGTVYKGKWHG-DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK-DNLAIVTQWCEGSSLYKHLHV 124 (307)
T ss_dssp CSSSEEEEEESSS-EEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSCEEEEECCSSCBHHHHHHT
T ss_pred CCCcEEEEEEECC-cEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEC-CeEEEEEEcCCCCCHHHHHhh
Confidence 9999999999865 477777753 33456789999999999999999999999865 468999999999999999965
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCC------CccccCccCCC
Q 014478 79 WETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG------KSYSTNLAFTP 152 (424)
Q Consensus 79 ~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~------~~~~gt~~y~a 152 (424)
...++++.+++.|+.||+.||.|||+++ ||||||||+|||++.++.+||+|||+|+..... ....||+.|||
T Consensus 125 -~~~~l~~~~~~~i~~qia~gL~yLH~~~-IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~~~~~~~~~~~GT~~ymA 202 (307)
T 3omv_A 125 -QETKFQMFQLIDIARQTAQGMDYLHAKN-IIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMA 202 (307)
T ss_dssp -SCCCCCHHHHHHHHHHHHHHHHHHHHTT-CBCSCCCSSSEEEETTEEEEECCCSSCBC------------CCCCTTSCC
T ss_pred -cCCCCCHHHHHHHHHHHHHHHHHHHHCC-ccCCccCHHHEEECCCCcEEEeeccCceecccCCcceeecccccCCCccC
Confidence 3567999999999999999999999999 999999999999999999999999999865421 34579999999
Q ss_pred cccccc---CCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHHHHHHHHHhcccCc
Q 014478 153 PEYMRT---GRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEA 229 (424)
Q Consensus 153 PE~~~~---~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp 229 (424)
||++.+ ++++.++|||||||++|||+||+.||.........................+..+++++.+|+.+||+.||
T Consensus 203 PE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~l~~li~~cl~~dP 282 (307)
T 3omv_A 203 PEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFMVGRGYASPDLSKLYKNCPKAMKRLVADCVKKVK 282 (307)
T ss_dssp HHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHTTCCCCCSTTSCTTSCHHHHHHHHHHTCSSS
T ss_pred HHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCChHHHHHHHHhcCCCCCCcccccccchHHHHHHHHHHcCCCH
Confidence 999964 45899999999999999999999998753211111111111111111223456788999999999999999
Q ss_pred CCCCCHHHHHHHHHHHhhh
Q 014478 230 RERPNAKSLVISLMSLQKE 248 (424)
Q Consensus 230 ~~Rps~~~~~~~l~~~~~~ 248 (424)
++|||+.+|+++|+.++..
T Consensus 283 ~~RPs~~ei~~~Le~l~~~ 301 (307)
T 3omv_A 283 EERPLFPQILSSIELLQHS 301 (307)
T ss_dssp TTSCCHHHHHHHHHHHHTT
T ss_pred hHCcCHHHHHHHHHHHhcc
Confidence 9999999999999887654
|
| >4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-57 Score=417.17 Aligned_cols=241 Identities=21% Similarity=0.278 Sum_probs=205.1
Q ss_pred CCCcccceeeee-------cceecccccCCCc-hhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHH
Q 014478 2 GGRCSKFSICWF-------HCHLKSSVLESSD-LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLA 73 (424)
Q Consensus 2 G~~g~v~~~~~~-------~~~v~~~~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~ 73 (424)
|+||.||++.|. +..||+|++.... ...+.|.+|+++|++|+|||||+++|+|.+++..+||||||+||+|.
T Consensus 24 G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~lV~Ey~~~G~L~ 103 (299)
T 4asz_A 24 GAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIMVFEYMKHGDLN 103 (299)
T ss_dssp --CCCEEEEEECSCC----CEEEEEEEECSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEEEEECCTTCBHH
T ss_pred CCCcEEEEEEECCcccCCCCEEEEEEEeCCCChHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCEEEEEEEcCCCCcHH
Confidence 999999999874 4568888886543 44678999999999999999999999999999999999999999999
Q ss_pred hHhccC-----------CCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCC-
Q 014478 74 KHLFHW-----------ETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG- 141 (424)
Q Consensus 74 ~~l~~~-----------~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~- 141 (424)
++|... ....+++.++++|+.||+.||.|||+++ ||||||||+|||++.++.+||+|||+++.....
T Consensus 104 ~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~-iiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~~ 182 (299)
T 4asz_A 104 KFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQH-FVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTD 182 (299)
T ss_dssp HHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEECGGGCEEECCCSCHHHHTGGG
T ss_pred HHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCC-cccCccCHhhEEECCCCcEEECCcccceecCCCC
Confidence 999642 2357999999999999999999999999 999999999999999999999999999865432
Q ss_pred -----CccccCccCCCccccccCCCCCCcceehhHHHHHHHhh-CCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHH
Q 014478 142 -----KSYSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGT 215 (424)
Q Consensus 142 -----~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (424)
....||+.|||||++.++.++.++|||||||++|||+| |+.||..... ..+...+........|..+|+
T Consensus 183 ~~~~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~~~-----~~~~~~i~~~~~~~~p~~~~~ 257 (299)
T 4asz_A 183 YYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSN-----NEVIECITQGRVLQRPRTCPQ 257 (299)
T ss_dssp CEEETTTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCH-----HHHHHHHHHTCCCCCCTTCCH
T ss_pred ceeecCceecChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCH-----HHHHHHHHcCCCCCCCccchH
Confidence 23458999999999999999999999999999999998 8888876422 222233333344566778899
Q ss_pred HHHHHHHHhcccCcCCCCCHHHHHHHHHHHhhh
Q 014478 216 ELVRLASRCLQSEARERPNAKSLVISLMSLQKE 248 (424)
Q Consensus 216 ~l~~li~~cl~~dp~~Rps~~~~~~~l~~~~~~ 248 (424)
++.+|+.+||+.||++|||+++|+..|+.+.+.
T Consensus 258 ~~~~li~~cl~~dP~~RPs~~~i~~~L~~~~~~ 290 (299)
T 4asz_A 258 EVYELMLGCWQREPHMRKNIKGIHTLLQNLAKA 290 (299)
T ss_dssp HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhc
Confidence 999999999999999999999999999887654
|
| >4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.6e-57 Score=419.69 Aligned_cols=241 Identities=20% Similarity=0.259 Sum_probs=202.0
Q ss_pred CCCcccceeeee-------cceecccccCCCc-hhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHH
Q 014478 2 GGRCSKFSICWF-------HCHLKSSVLESSD-LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLA 73 (424)
Q Consensus 2 G~~g~v~~~~~~-------~~~v~~~~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~ 73 (424)
|+||.||++.|. +..||+|++.... ...+.|.+|+++|++++|||||+++|+|.+++..+||||||++|+|.
T Consensus 52 G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~lV~Ey~~~G~L~ 131 (329)
T 4aoj_A 52 GAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLN 131 (329)
T ss_dssp CSSEEEEEEEESSSCC---CEEEEEEEESCCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEEEEECCTTCBHH
T ss_pred CCCcEEEEEEECCcccCCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEEcCCCCcHH
Confidence 999999999874 4668999886544 44678999999999999999999999999999999999999999999
Q ss_pred hHhccCC-------------CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCC
Q 014478 74 KHLFHWE-------------TQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRD 140 (424)
Q Consensus 74 ~~l~~~~-------------~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~ 140 (424)
+++.... ..++++.++++|+.||+.||.|||+++ ||||||||+|||++.++.+||+|||+++....
T Consensus 132 ~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~-iiHRDLKp~NILl~~~~~~Ki~DFGla~~~~~ 210 (329)
T 4aoj_A 132 RFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLH-FVHRDLATRNCLVGQGLVVKIGDFGMSRDIYS 210 (329)
T ss_dssp HHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEEETTTEEEECCCC-------
T ss_pred HHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhcCC-eecccccHhhEEECCCCcEEEcccccceeccC
Confidence 9986431 246999999999999999999999999 99999999999999999999999999986543
Q ss_pred C------CccccCccCCCccccccCCCCCCcceehhHHHHHHHhh-CCCCCCchhhHHHhhhhhhHhhhcccCCCCCchh
Q 014478 141 G------KSYSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDE 213 (424)
Q Consensus 141 ~------~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 213 (424)
. ....||+.|||||++.+..++.++|||||||++|||+| |+.||...... .....+....+...|..+
T Consensus 211 ~~~~~~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~~~~-----~~~~~i~~g~~~~~p~~~ 285 (329)
T 4aoj_A 211 TDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNT-----EAIDCITQGRELERPRAC 285 (329)
T ss_dssp ---------CCCCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSSCHH-----HHHHHHHHTCCCCCCTTC
T ss_pred CCcceecCcccccccccChhhhcCCCCCccccccchHHHHHHHHcCCCCCCCCCCHH-----HHHHHHHcCCCCCCcccc
Confidence 2 23568999999999999999999999999999999999 88888764221 222223333445667788
Q ss_pred HHHHHHHHHHhcccCcCCCCCHHHHHHHHHHHhhh
Q 014478 214 GTELVRLASRCLQSEARERPNAKSLVISLMSLQKE 248 (424)
Q Consensus 214 ~~~l~~li~~cl~~dp~~Rps~~~~~~~l~~~~~~ 248 (424)
++++.+|+.+||+.||++|||+++|+++|+.+.+.
T Consensus 286 ~~~~~~li~~cl~~dP~~RPs~~ei~~~L~~l~~~ 320 (329)
T 4aoj_A 286 PPEVYAIMRGCWQREPQQRHSIKDVHARLQALAQA 320 (329)
T ss_dssp CHHHHHHHHHHCCSSTTTSCCHHHHHHHHHHHHHS
T ss_pred cHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHhhC
Confidence 99999999999999999999999999999988754
|
| >4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A | Back alignment and structure |
|---|
Probab=100.00 E-value=7.8e-57 Score=416.46 Aligned_cols=238 Identities=16% Similarity=0.185 Sum_probs=203.6
Q ss_pred CCCcccceeeee-------cceecccccCCCc--hhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCH
Q 014478 2 GGRCSKFSICWF-------HCHLKSSVLESSD--LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETL 72 (424)
Q Consensus 2 G~~g~v~~~~~~-------~~~v~~~~~~~~~--~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL 72 (424)
||||.||++.|. +..||+|++.... ...+.|.+|+.+|++++|||||+++|+|.+++..+||||||++|+|
T Consensus 37 G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~lV~Ey~~~G~L 116 (308)
T 4gt4_A 37 DRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDL 116 (308)
T ss_dssp CSSCEEEEEEEC-------CEEEEEEECCC-CCC-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCSSCBH
T ss_pred CCCcEEEEEEEcCCccCCCCeEEEEEEECcccChHHHHHHHHHHHHHHhCCCCCCCCcceEEEECCEEEEEEEcCCCCcH
Confidence 999999999984 3568888885433 3467899999999999999999999999999999999999999999
Q ss_pred HhHhccCC--------------CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccC
Q 014478 73 AKHLFHWE--------------TQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNS 138 (424)
Q Consensus 73 ~~~l~~~~--------------~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~ 138 (424)
.++|.... ...+++.++++|+.||+.||.|||+++ ||||||||+|||++.++++||+|||+++..
T Consensus 117 ~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~-iiHRDLK~~NILl~~~~~~Ki~DFGlar~~ 195 (308)
T 4gt4_A 117 HEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSHH-VVHKDLATRNVLVYDKLNVKISDLGLFREV 195 (308)
T ss_dssp HHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEECGGGCEEECCSCCBCGG
T ss_pred HHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhCC-CCCCCccccceEECCCCCEEECCcccceec
Confidence 99995421 246899999999999999999999999 999999999999999999999999999865
Q ss_pred CC------CCccccCccCCCccccccCCCCCCcceehhHHHHHHHhh-CCCCCCchhhHHHhhhhhhHhhhcccCCCCCc
Q 014478 139 RD------GKSYSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKNFLLLMDSALEGHFSN 211 (424)
Q Consensus 139 ~~------~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 211 (424)
.. .....||+.|||||++.++.++.++|||||||++|||+| |..||..... ..+...+......+.|.
T Consensus 196 ~~~~~~~~~~~~~gt~~ymAPE~l~~~~~s~ksDVwSfGvvl~El~t~g~~Pf~~~~~-----~~~~~~i~~~~~~~~p~ 270 (308)
T 4gt4_A 196 YAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSN-----QDVVEMIRNRQVLPCPD 270 (308)
T ss_dssp GGGGCBCSSSSSCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTCCH-----HHHHHHHHTTCCCCCCT
T ss_pred cCCCceeEecccccCCcccCHHHHhCCCCCccchhhhHHHHHHHHHhCCCCCCCCCCH-----HHHHHHHHcCCCCCCcc
Confidence 32 234568999999999999999999999999999999998 7878776422 22333344444556778
Q ss_pred hhHHHHHHHHHHhcccCcCCCCCHHHHHHHHHHH
Q 014478 212 DEGTELVRLASRCLQSEARERPNAKSLVISLMSL 245 (424)
Q Consensus 212 ~~~~~l~~li~~cl~~dp~~Rps~~~~~~~l~~~ 245 (424)
.+|+++.+|+.+||+.||++|||+.+|++.|+.+
T Consensus 271 ~~~~~~~~li~~C~~~dP~~RPs~~ei~~~L~a~ 304 (308)
T 4gt4_A 271 DCPAWVYALMIECWNEFPSRRPRFKDIHSRLRAW 304 (308)
T ss_dssp TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTS
T ss_pred cchHHHHHHHHHHcCCChhHCcCHHHHHHHHHhc
Confidence 8999999999999999999999999999998754
|
| >4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-56 Score=417.93 Aligned_cols=234 Identities=16% Similarity=0.200 Sum_probs=199.0
Q ss_pred CCCcccceeee--ecceecccccCCCc---hhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHhHh
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESSD---LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHL 76 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~~---~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~l 76 (424)
||||.||.+.+ .+..||+|++.... ...+.|.+|+++|++|+|||||++++++.+++..|||||||+||+|.++|
T Consensus 35 G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~yiVmEy~~gg~L~~~i 114 (350)
T 4b9d_A 35 GSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVMDYCEGGDLFKRI 114 (350)
T ss_dssp ----CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCTTCBHHHHH
T ss_pred CCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEeCCCCCcHHHHH
Confidence 89999999987 57889999885443 34678999999999999999999999999999999999999999999999
Q ss_pred ccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCC----CccccCccCCC
Q 014478 77 FHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG----KSYSTNLAFTP 152 (424)
Q Consensus 77 ~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~----~~~~gt~~y~a 152 (424)
....+..+++.+++.|+.||+.||.|||+++ ||||||||+|||++.+|.+||+|||+++..... ...+||+.|||
T Consensus 115 ~~~~~~~~~e~~~~~~~~qi~~aL~ylH~~~-IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~~~~~~~~GT~~YmA 193 (350)
T 4b9d_A 115 NAQKGVLFQEDQILDWFVQICLALKHVHDRK-ILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVELARACIGTPYYLS 193 (350)
T ss_dssp HHTTTCCCCHHHHHHHHHHHHHHHHHHHHTT-CEETTCCGGGEEECTTCCEEECSTTEESCCCHHHHHHHHHHSCCTTCC
T ss_pred HHcCCCCCCHHHHHHHHHHHHHHHHHHHHCC-eeeccCCHHHEEECCCCCEEEcccccceeecCCcccccccCCCccccC
Confidence 7655667899999999999999999999999 999999999999999999999999999976543 23579999999
Q ss_pred ccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHHHHHHHHHhcccCcCCC
Q 014478 153 PEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARER 232 (424)
Q Consensus 153 PE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~R 232 (424)
||++.+..|+.++|||||||++|||++|+.||........ ...+.... ....+..+++++.+||.+||+.||++|
T Consensus 194 PE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~~~----~~~i~~~~-~~~~~~~~s~~~~~li~~~L~~dP~~R 268 (350)
T 4b9d_A 194 PEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSMKNL----VLKIISGS-FPPVSLHYSYDLRSLVSQLFKRNPRDR 268 (350)
T ss_dssp HHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHH----HHHHHHTC-CCCCCTTSCHHHHHHHHHHTCSSGGGS
T ss_pred HHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHH----HHHHHcCC-CCCCCccCCHHHHHHHHHHccCChhHC
Confidence 9999999999999999999999999999999987532221 11222222 234556788999999999999999999
Q ss_pred CCHHHHHHH
Q 014478 233 PNAKSLVIS 241 (424)
Q Consensus 233 ps~~~~~~~ 241 (424)
||+++++++
T Consensus 269 ~s~~e~l~h 277 (350)
T 4b9d_A 269 PSVNSILEK 277 (350)
T ss_dssp CCHHHHHTS
T ss_pred cCHHHHhcC
Confidence 999999986
|
| >4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-55 Score=410.13 Aligned_cols=238 Identities=17% Similarity=0.125 Sum_probs=201.5
Q ss_pred CCCcccceeee--ecceecccccCCCchhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHhHhccC
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESSDLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHW 79 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~ 79 (424)
|+||.||++.+ .+..||+|++.... .+.+|+.+|++++|||||++++++.+++..|||||||+||+|.+++.+
T Consensus 69 G~fG~Vy~a~~~~~g~~vAiK~i~~~~----~~~~E~~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~~gg~L~~~l~~- 143 (336)
T 4g3f_A 69 GSFGEVHRMKDKQTGFQCAVKKVRLEV----FRVEELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLIKQ- 143 (336)
T ss_dssp ETTEEEEEEEETTTCCEEEEEEEETTT----CCTHHHHTTTTCCCTTBCCEEEEEEETTEEEEEECCCTTCBHHHHHHH-
T ss_pred CCCeEEEEEEECCCCCEEEEEEECHHH----hHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeccCCCcHHHHHHH-
Confidence 89999999987 57789999886543 235799999999999999999999999999999999999999999975
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCC-CeEEccccccccCCCC---------CccccCcc
Q 014478 80 ETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDG-NPRLSSFGLMKNSRDG---------KSYSTNLA 149 (424)
Q Consensus 80 ~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~-~~kl~Dfg~~~~~~~~---------~~~~gt~~ 149 (424)
.+++++.++..++.||+.||.|||+++ ||||||||+|||++.+| .+||+|||+++..... ...+||+.
T Consensus 144 -~~~l~e~~~~~~~~qi~~aL~ylH~~~-IiHRDlKp~NILl~~~g~~vKl~DFGla~~~~~~~~~~~~~~~~~~~GT~~ 221 (336)
T 4g3f_A 144 -MGCLPEDRALYYLGQALEGLEYLHTRR-ILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTET 221 (336)
T ss_dssp -HSSCCHHHHHHHHHHHHHHHHHHHTTT-EECSCCCGGGEEECTTSCCEEECCCTTCEEC------------CCCCCCGG
T ss_pred -cCCCCHHHHHHHHHHHHHHHHHHHHCC-ceecccCHHHEEEeCCCCEEEEeeCCCCeEccCCCcccceecCCccccCcc
Confidence 467999999999999999999999999 99999999999999988 6999999999865432 23469999
Q ss_pred CCCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhc-ccCCCCCchhHHHHHHHHHHhcccC
Q 014478 150 FTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDS-ALEGHFSNDEGTELVRLASRCLQSE 228 (424)
Q Consensus 150 y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~li~~cl~~d 228 (424)
|||||++.+..++.++|||||||++|||++|+.||...... .....+... ......+..+++++.++|.+||+.|
T Consensus 222 YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~----~~~~~i~~~~~~~~~~~~~~s~~~~~li~~~L~~d 297 (336)
T 4g3f_A 222 HMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRG----PLCLKIASEPPPIREIPPSCAPLTAQAIQEGLRKE 297 (336)
T ss_dssp GCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTTCCS----CCHHHHHHSCCGGGGSCTTSCHHHHHHHHHHTCSS
T ss_pred ccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHH----HHHHHHHcCCCCchhcCccCCHHHHHHHHHHccCC
Confidence 99999999999999999999999999999999998764211 111122211 1122356678899999999999999
Q ss_pred cCCCCCHHHHHHHHHHHhhhhh
Q 014478 229 ARERPNAKSLVISLMSLQKEAE 250 (424)
Q Consensus 229 p~~Rps~~~~~~~l~~~~~~~~ 250 (424)
|++|||+.|++++|.....+..
T Consensus 298 P~~R~sa~el~~~l~~~l~~~~ 319 (336)
T 4g3f_A 298 PVHRASAMELRRKVGKALQEVG 319 (336)
T ss_dssp GGGSCCHHHHHHHHHHHHHHTT
T ss_pred HhHCcCHHHHHHHHHHHHhhhh
Confidence 9999999999999988877644
|
| >2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.5e-55 Score=448.91 Aligned_cols=228 Identities=19% Similarity=0.236 Sum_probs=184.6
Q ss_pred CCCcccceeeee---cceecccccCCC--chhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCe-----eeEEEecCCCCC
Q 014478 2 GGRCSKFSICWF---HCHLKSSVLESS--DLGETLNLEEAKAVGNLRSERLANLIGCCYEADE-----RLLVAEFMPNET 71 (424)
Q Consensus 2 G~~g~v~~~~~~---~~~v~~~~~~~~--~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~-----~~lv~e~~~~gs 71 (424)
||||.||.+.+. +..|++|++... ......+.+|++++.+++||||++++++|...+. .||||||++|++
T Consensus 91 G~~g~Vy~a~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~~~lv~E~~~g~~ 170 (681)
T 2pzi_A 91 GGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDPVGYIVMEYVGGQS 170 (681)
T ss_dssp ETTEEEEEEEEGGGTTEEEEEEESCSSCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTSCEEEEEEEECCCCEE
T ss_pred CCCeEEEEEEEcCCCCcEEEEEEeCccCCHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCCCceeEEEEEeCCCCc
Confidence 899999999884 567888877543 2345678999999999999999999999988665 699999999999
Q ss_pred HHhHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCCCccccCccCC
Q 014478 72 LAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLAFT 151 (424)
Q Consensus 72 L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~gt~~y~ 151 (424)
|.+++. ..+++.+++.++.||+.||.|||+++ ||||||||+|||++.+ .+||+|||+++.........||+.|+
T Consensus 171 L~~~~~----~~l~~~~~~~~~~qi~~aL~~lH~~g-iiHrDlkp~NIll~~~-~~kl~DFG~a~~~~~~~~~~gt~~y~ 244 (681)
T 2pzi_A 171 LKRSKG----QKLPVAEAIAYLLEILPALSYLHSIG-LVYNDLKPENIMLTEE-QLKLIDLGAVSRINSFGYLYGTPGFQ 244 (681)
T ss_dssp CC--------CCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEECSS-CEEECCCTTCEETTCCSCCCCCTTTS
T ss_pred HHHHHh----CCCCHHHHHHHHHHHHHHHHHHHHCC-CeecccChHHeEEeCC-cEEEEecccchhcccCCccCCCcccc
Confidence 998873 37999999999999999999999999 9999999999999875 89999999999887777778999999
Q ss_pred CccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHHHHHHHHHhcccCcCC
Q 014478 152 PPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARE 231 (424)
Q Consensus 152 aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~ 231 (424)
|||++.++. +.++|||||||++|+|++|..|+...... ...........++.+.++|.+||+.||.+
T Consensus 245 aPE~~~~~~-~~~sDi~slG~~l~~l~~g~~~~~~~~~~------------~~~~~~~~~~~~~~l~~li~~~l~~dP~~ 311 (681)
T 2pzi_A 245 APEIVRTGP-TVATDIYTVGRTLAALTLDLPTRNGRYVD------------GLPEDDPVLKTYDSYGRLLRRAIDPDPRQ 311 (681)
T ss_dssp CTTHHHHCS-CHHHHHHHHHHHHHHHHSCCCEETTEECS------------SCCTTCHHHHHCHHHHHHHHHHTCSSGGG
T ss_pred CHHHHcCCC-CCceehhhhHHHHHHHHhCCCCCcccccc------------cccccccccccCHHHHHHHhhhccCChhh
Confidence 999998654 88999999999999999998665432100 00000111124578999999999999999
Q ss_pred CC-CHHHHHHHHHHHhhh
Q 014478 232 RP-NAKSLVISLMSLQKE 248 (424)
Q Consensus 232 Rp-s~~~~~~~l~~~~~~ 248 (424)
|| +++++...|..+..+
T Consensus 312 R~~~~~~l~~~l~~~~~~ 329 (681)
T 2pzi_A 312 RFTTAEEMSAQLTGVLRE 329 (681)
T ss_dssp SCSSHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHH
Confidence 98 566666667666543
|
| >4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-55 Score=409.73 Aligned_cols=232 Identities=19% Similarity=0.237 Sum_probs=198.8
Q ss_pred CCCcccceeee--ecceecccccCCCc-hhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHhHhcc
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESSD-LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFH 78 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~ 78 (424)
|+||.||.+.+ .+..||+|++.... ...+.+.+|+++|++++|||||+++++|.+++..|||||||+||+|.+++.+
T Consensus 85 G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~~gg~L~~~l~~ 164 (346)
T 4fih_A 85 GSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTH 164 (346)
T ss_dssp CSSCEEEEEEETTTCCEEEEEEEEGGGCSSGGGGHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEECCCTTEEHHHHHHH
T ss_pred CcCeEEEEEEECCCCCEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeCCCCCcHHHHHHc
Confidence 99999999998 57789999885433 3456789999999999999999999999999999999999999999999964
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCC----CccccCccCCCcc
Q 014478 79 WETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG----KSYSTNLAFTPPE 154 (424)
Q Consensus 79 ~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~----~~~~gt~~y~aPE 154 (424)
..+++.++..++.||+.||.|||+++ ||||||||+|||++.+|.+||+|||+++..... ...+||+.|||||
T Consensus 165 ---~~l~e~~~~~~~~qi~~aL~ylH~~~-IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~~~~~~~~GTp~YmAPE 240 (346)
T 4fih_A 165 ---TRMNEEQIAAVCLAVLQALSVLHAQG-VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKSLVGTPYWMAPE 240 (346)
T ss_dssp ---SCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEECTTCCEEECCCTTCEECCSSSCCBCCCCSCGGGCCHH
T ss_pred ---CCCCHHHHHHHHHHHHHHHHHHHHCC-cccccCCHHHEEECCCCCEEEecCcCceecCCCCCcccccccCcCcCCHH
Confidence 46999999999999999999999999 999999999999999999999999999876433 3568999999999
Q ss_pred ccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhc-ccCCCCCchhHHHHHHHHHHhcccCcCCCC
Q 014478 155 YMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDS-ALEGHFSNDEGTELVRLASRCLQSEARERP 233 (424)
Q Consensus 155 ~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~li~~cl~~dp~~Rp 233 (424)
++.+..|+.++|||||||++|||++|+.||........ +..+... ......+..+++++.+||.+||+.||++||
T Consensus 241 vl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~----~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~ 316 (346)
T 4fih_A 241 LISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKA----MKMIRDNLPPRLKNLHKVSPSLKGFLDRLLVRDPAQRA 316 (346)
T ss_dssp HHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHH----HHHHHHSSCCCCSCGGGSCHHHHHHHHHHSCSSTTTSC
T ss_pred HHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHH----HHHHHcCCCCCCCccccCCHHHHHHHHHHcCCChhHCc
Confidence 99989999999999999999999999999876422111 1111111 112233456789999999999999999999
Q ss_pred CHHHHHHH
Q 014478 234 NAKSLVIS 241 (424)
Q Consensus 234 s~~~~~~~ 241 (424)
|++|+++|
T Consensus 317 ta~e~l~H 324 (346)
T 4fih_A 317 TAAELLKH 324 (346)
T ss_dssp CHHHHTTC
T ss_pred CHHHHhcC
Confidence 99999865
|
| >3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.8e-55 Score=400.57 Aligned_cols=234 Identities=17% Similarity=0.207 Sum_probs=191.0
Q ss_pred CCCcccceeee--ecceecccccCCC---chhhhHHHHHHHHHhcCCCcCcceeEEEEEe----CCeeeEEEecCCCCCH
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESS---DLGETLNLEEAKAVGNLRSERLANLIGCCYE----ADERLLVAEFMPNETL 72 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~---~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~----~~~~~lv~e~~~~gsL 72 (424)
||||.||++.+ .+..||+|++... ....+.|.+|+++|++|+|||||+++++|.. +...|||||||+||+|
T Consensus 37 G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~lvmEy~~gg~L 116 (290)
T 3fpq_A 37 GSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVTELMTSGTL 116 (290)
T ss_dssp CSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEEEEEEECCCSCBH
T ss_pred CcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcEEEEEEeCCCCCCH
Confidence 99999999998 4566787777433 3346789999999999999999999999875 2457899999999999
Q ss_pred HhHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCC-CcccccCCCCCeeec-CCCCeEEccccccccCCCC--CccccCc
Q 014478 73 AKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKG-RALYHDLNAYRILFD-KDGNPRLSSFGLMKNSRDG--KSYSTNL 148 (424)
Q Consensus 73 ~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~-~ivH~dikp~Nill~-~~~~~kl~Dfg~~~~~~~~--~~~~gt~ 148 (424)
.+++.+ ...+++..+..|+.||+.||.|||+++ +||||||||+|||++ .+|.+||+|||+|+..... ....||+
T Consensus 117 ~~~l~~--~~~l~~~~~~~~~~qi~~aL~ylH~~~~~IiHRDlKp~NILl~~~~g~vKl~DFGla~~~~~~~~~~~~GTp 194 (290)
T 3fpq_A 117 KTYLKR--FKVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRASFAKAVIGTP 194 (290)
T ss_dssp HHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHTSSSCCCCCCCCGGGEEESSTTSCEEECCTTGGGGCCTTSBEESCSSC
T ss_pred HHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEecccChhheeEECCCCCEEEEeCcCCEeCCCCccCCcccCc
Confidence 999975 467999999999999999999999986 499999999999997 4799999999999865543 3457999
Q ss_pred cCCCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHHHHHHHHHhcccC
Q 014478 149 AFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSE 228 (424)
Q Consensus 149 ~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~d 228 (424)
.|||||++. ++++.++|||||||++|||+||+.||....... .....+.....+...+..+++++.+||.+||+.|
T Consensus 195 ~YmAPE~~~-~~y~~~~DiwSlGvilyelltg~~Pf~~~~~~~---~~~~~i~~~~~~~~~~~~~~~~~~~li~~~L~~d 270 (290)
T 3fpq_A 195 EFMAPEMYE-EKYDESVDVYAFGMCMLEMATSEYPYSECQNAA---QIYRRVTSGVKPASFDKVAIPEVKEIIEGCIRQN 270 (290)
T ss_dssp CCCCGGGGG-TCCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHH---HHHHHHTTTCCCGGGGGCCCHHHHHHHHHHSCSS
T ss_pred cccCHHHcC-CCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcHH---HHHHHHHcCCCCCCCCccCCHHHHHHHHHHccCC
Confidence 999999987 469999999999999999999999886531110 0111111111222234456788999999999999
Q ss_pred cCCCCCHHHHHHH
Q 014478 229 ARERPNAKSLVIS 241 (424)
Q Consensus 229 p~~Rps~~~~~~~ 241 (424)
|++|||++++++|
T Consensus 271 P~~R~s~~e~l~H 283 (290)
T 3fpq_A 271 KDERYSIKDLLNH 283 (290)
T ss_dssp GGGSCCHHHHHTS
T ss_pred hhHCcCHHHHhcC
Confidence 9999999999865
|
| >4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-54 Score=406.68 Aligned_cols=242 Identities=19% Similarity=0.283 Sum_probs=204.2
Q ss_pred CCCcccceeeeec-------ceecccccCCCc--hhhhHHHHHHHHHhcCCC-cCcceeEEEEEeC-CeeeEEEecCCCC
Q 014478 2 GGRCSKFSICWFH-------CHLKSSVLESSD--LGETLNLEEAKAVGNLRS-ERLANLIGCCYEA-DERLLVAEFMPNE 70 (424)
Q Consensus 2 G~~g~v~~~~~~~-------~~v~~~~~~~~~--~~~~~~~~E~~~l~~l~h-~~iv~~~~~~~~~-~~~~lv~e~~~~g 70 (424)
|+||.||++.|.+ ..|++|++.... ...+.|.+|+++|.+++| ||||+++|+|... +..+||||||++|
T Consensus 75 G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~~~~~~~~E~~il~~l~hhpnIV~l~g~~~~~~~~~~iV~Ey~~~G 154 (353)
T 4ase_A 75 GAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFG 154 (353)
T ss_dssp CSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECCTTSCCEEEEECCTTE
T ss_pred CCCeEEEEEEEcCCCcccCCeEEEEEEEccccChHHHHHHHHHHHHHHHcCCCCcEEEEEEEEEecCCEEEEEEEcCCCC
Confidence 9999999999865 347778775433 345689999999999965 8999999999764 5689999999999
Q ss_pred CHHhHhccCC--------------CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccc
Q 014478 71 TLAKHLFHWE--------------TQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMK 136 (424)
Q Consensus 71 sL~~~l~~~~--------------~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~ 136 (424)
+|.++|.... ...+++.+++.++.||+.||.|||+++ ||||||||+|||++.++.+||+|||+|+
T Consensus 155 ~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~~~-iiHRDLK~~NILl~~~~~vKi~DFGlar 233 (353)
T 4ase_A 155 NLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK-CIHRDLAARNILLSEKNVVKICDFGLAR 233 (353)
T ss_dssp EHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEECGGGCEEECCCGGGS
T ss_pred CHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhhCC-eecCccCccceeeCCCCCEEECcchhhh
Confidence 9999996421 345899999999999999999999999 9999999999999999999999999998
Q ss_pred cCCCCC------ccccCccCCCccccccCCCCCCcceehhHHHHHHHhh-CCCCCCchhhHHHhhhhhhHhhhcccCCCC
Q 014478 137 NSRDGK------SYSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKNFLLLMDSALEGHF 209 (424)
Q Consensus 137 ~~~~~~------~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 209 (424)
...... ...||+.|||||++.++.++.++|||||||++|||+| |..||+.... ...+...+....+...
T Consensus 234 ~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~y~~ksDVwS~Gv~l~El~t~G~~Pf~~~~~----~~~~~~~i~~g~~~~~ 309 (353)
T 4ase_A 234 DIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKI----DEEFCRRLKEGTRMRA 309 (353)
T ss_dssp CTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCC----SHHHHHHHHHTCCCCC
T ss_pred hcccCCCceeeccccccccccCHHHHhcCCCCCcccEeehHHHHHHHHhCCCCCCCCCCH----HHHHHHHHHcCCCCCC
Confidence 764332 3457899999999999999999999999999999998 8888876421 1223334444555667
Q ss_pred CchhHHHHHHHHHHhcccCcCCCCCHHHHHHHHHHHhhh
Q 014478 210 SNDEGTELVRLASRCLQSEARERPNAKSLVISLMSLQKE 248 (424)
Q Consensus 210 ~~~~~~~l~~li~~cl~~dp~~Rps~~~~~~~l~~~~~~ 248 (424)
|..+++++.+++.+||+.||++|||+.+|+++|+.+.+.
T Consensus 310 p~~~~~~~~~li~~c~~~dP~~RPt~~eil~~L~~llq~ 348 (353)
T 4ase_A 310 PDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQA 348 (353)
T ss_dssp CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred CccCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHHHH
Confidence 778899999999999999999999999999999988764
|
| >4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.9e-54 Score=411.36 Aligned_cols=232 Identities=19% Similarity=0.237 Sum_probs=198.8
Q ss_pred CCCcccceeee--ecceecccccCCCc-hhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHhHhcc
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESSD-LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFH 78 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~ 78 (424)
|+||.||.+.+ .+..||+|++.... ...+.+.+|+.+|+.++|||||+++++|.+++..|||||||+||+|.+++..
T Consensus 162 G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~iVmEy~~gG~L~~~i~~ 241 (423)
T 4fie_A 162 GSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTH 241 (423)
T ss_dssp CSSCEEEEEEETTTCCEEEEEEEESTTCSSGGGHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCTTEEHHHHHHH
T ss_pred CcCcEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCCCceEEEEEECCEEEEEEeCCCCCcHHHHHhc
Confidence 99999999998 57889999885433 3467889999999999999999999999999999999999999999999964
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCC----CccccCccCCCcc
Q 014478 79 WETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG----KSYSTNLAFTPPE 154 (424)
Q Consensus 79 ~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~----~~~~gt~~y~aPE 154 (424)
..+++.++..|+.||+.||.|||+++ ||||||||+||||+.+|.+||+|||+|+..... ...+||+.|||||
T Consensus 242 ---~~l~e~~~~~~~~qil~aL~ylH~~~-IiHRDiKp~NILl~~~g~vKl~DFGla~~~~~~~~~~~~~~GTp~YmAPE 317 (423)
T 4fie_A 242 ---TRMNEEQIAAVCLAVLQALSVLHAQG-VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKSLVGTPYWMAPE 317 (423)
T ss_dssp ---SCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSTTTEEECTTCCEEECCCTTCEECCSSCCCBCCCEECTTTCCHH
T ss_pred ---cCCCHHHHHHHHHHHHHHHHHHHHCC-eecccCCHHHEEEcCCCCEEEecCccceECCCCCccccccccCcCcCCHH
Confidence 46999999999999999999999999 999999999999999999999999999876433 3567999999999
Q ss_pred ccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhc-ccCCCCCchhHHHHHHHHHHhcccCcCCCC
Q 014478 155 YMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDS-ALEGHFSNDEGTELVRLASRCLQSEARERP 233 (424)
Q Consensus 155 ~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~li~~cl~~dp~~Rp 233 (424)
++.+..|+.++|||||||++|||++|+.||........ +..+... ......+..+++++.+||.+||..||++||
T Consensus 318 vl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~----~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~ 393 (423)
T 4fie_A 318 LISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKA----MKMIRDNLPPRLKNLHKVSPSLKGFLDRLLVRDPAQRA 393 (423)
T ss_dssp HHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHH----HHHHHHSCCCCCSCTTSSCHHHHHHHHHHSCSSTTTSC
T ss_pred HHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHH----HHHHHcCCCCCCcccccCCHHHHHHHHHHcCCChhHCc
Confidence 99999999999999999999999999999876422111 1111111 112233456789999999999999999999
Q ss_pred CHHHHHHH
Q 014478 234 NAKSLVIS 241 (424)
Q Consensus 234 s~~~~~~~ 241 (424)
|+.|+++|
T Consensus 394 ta~ell~H 401 (423)
T 4fie_A 394 TAAELLKH 401 (423)
T ss_dssp CHHHHTTC
T ss_pred CHHHHhcC
Confidence 99999865
|
| >4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-54 Score=399.41 Aligned_cols=231 Identities=17% Similarity=0.182 Sum_probs=199.2
Q ss_pred CCCcccceeee--ecceecccccCCCc----hhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHhH
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESSD----LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKH 75 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~~----~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~ 75 (424)
|+||.||.+.. .+..+|+|++.+.. ...+.+.+|+++|++|+|||||++++++.+++..|||||||+||+|.++
T Consensus 43 G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~yivmEy~~gG~L~~~ 122 (311)
T 4aw0_A 43 GSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKY 122 (311)
T ss_dssp ETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEECCCTTEEHHHH
T ss_pred ccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEecCCCCCHHHH
Confidence 89999999987 57788999886432 3356789999999999999999999999999999999999999999999
Q ss_pred hccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCC------CccccCcc
Q 014478 76 LFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG------KSYSTNLA 149 (424)
Q Consensus 76 l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~------~~~~gt~~ 149 (424)
+.+ .+.+++.++..++.||+.||.|||+++ ||||||||+|||++.+|.+||+|||+|+..... .+.+||+.
T Consensus 123 i~~--~~~l~e~~~~~~~~qi~~al~ylH~~~-IiHRDlKPeNILl~~~g~vKl~DFGla~~~~~~~~~~~~~~~~GTp~ 199 (311)
T 4aw0_A 123 IRK--IGSFDETCTRFYTAEIVSALEYLHGKG-IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQ 199 (311)
T ss_dssp HHH--HSSCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEECTTSCEEECCCTTCEECCTTTTCCCBCCCCSCGG
T ss_pred HHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-CccCCCCHHHeEEcCCCCEEEEEcCCceecCCCCCcccccCcccCcc
Confidence 975 467999999999999999999999999 999999999999999999999999999875422 34579999
Q ss_pred CCCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHHHHHHHHHhcccCc
Q 014478 150 FTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEA 229 (424)
Q Consensus 150 y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp 229 (424)
|||||++.+..++.++|||||||++|||++|..||........ ...+... ...+|..+++++.+||.+||+.||
T Consensus 200 YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~----~~~i~~~--~~~~p~~~s~~~~dli~~lL~~dp 273 (311)
T 4aw0_A 200 YVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEGLI----FAKIIKL--EYDFPEKFFPKARDLVEKLLVLDA 273 (311)
T ss_dssp GCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHH----HHHHHHT--CCCCCTTCCHHHHHHHHHHSCSSG
T ss_pred cCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHH----HHHHHcC--CCCCCcccCHHHHHHHHHHccCCH
Confidence 9999999999999999999999999999999999876532222 1122222 224566788999999999999999
Q ss_pred CCCCCHHHHHHH
Q 014478 230 RERPNAKSLVIS 241 (424)
Q Consensus 230 ~~Rps~~~~~~~ 241 (424)
++|||++|++.+
T Consensus 274 ~~R~t~~e~~~~ 285 (311)
T 4aw0_A 274 TKRLGCEEMEGY 285 (311)
T ss_dssp GGSTTSGGGTCH
T ss_pred hHCcChHHHcCC
Confidence 999999997644
|
| >3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-53 Score=387.25 Aligned_cols=231 Identities=17% Similarity=0.188 Sum_probs=186.5
Q ss_pred CCCcccceeee--ecceecccccCCCc----hhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHhH
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESSD----LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKH 75 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~~----~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~ 75 (424)
||||.||.+.+ .+..||+|++.... .....+.+|+++|++++|||||++++++.+.+..||||||+ +|+|.++
T Consensus 24 G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~ivmEy~-~g~L~~~ 102 (275)
T 3hyh_A 24 GSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYA-GNELFDY 102 (275)
T ss_dssp ---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEECC-CEEHHHH
T ss_pred CcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEEeCC-CCCHHHH
Confidence 89999999987 57889999885433 23567899999999999999999999999999999999999 6799999
Q ss_pred hccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCC---CccccCccCCC
Q 014478 76 LFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG---KSYSTNLAFTP 152 (424)
Q Consensus 76 l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~---~~~~gt~~y~a 152 (424)
+.+ .+++++.++..++.||+.||.|||+++ |+||||||+|||++.++++||+|||+|+..... ....||+.|||
T Consensus 103 l~~--~~~l~e~~~~~~~~qi~~al~ylH~~~-IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~~~~~~~~~GT~~Y~A 179 (275)
T 3hyh_A 103 IVQ--RDKMSEQEARRFFQQIISAVEYCHRHK-IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAA 179 (275)
T ss_dssp HHH--SCSCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCTTTEEECTTCCEEECCSSCC---------------CTTSC
T ss_pred HHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-cccccCChHHeEECCCCCEEEeecCCCeecCCCCccCCeeECcccCC
Confidence 875 567999999999999999999999999 999999999999999999999999999875543 34679999999
Q ss_pred ccccccCCC-CCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHHHHHHHHHhcccCcCC
Q 014478 153 PEYMRTGRV-TPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARE 231 (424)
Q Consensus 153 PE~~~~~~~-~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~ 231 (424)
||++.+..+ +.++|||||||++|+|++|+.||........-. .+... ....|..+++++.+||.+||+.||++
T Consensus 180 PE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~~~~~~~~~----~i~~~--~~~~p~~~s~~~~~li~~~L~~dP~~ 253 (275)
T 3hyh_A 180 PEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFK----NISNG--VYTLPKFLSPGAAGLIKRMLIVNPLN 253 (275)
T ss_dssp HHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHH----HHHHT--CCCCCTTSCHHHHHHHHHHSCSSGGG
T ss_pred hhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCCCCHHHHHH----HHHcC--CCCCCCCCCHHHHHHHHHHccCChhH
Confidence 999998776 579999999999999999999987653222111 11111 22356678899999999999999999
Q ss_pred CCCHHHHHHHH
Q 014478 232 RPNAKSLVISL 242 (424)
Q Consensus 232 Rps~~~~~~~l 242 (424)
|||++|+++|-
T Consensus 254 R~s~~eil~hp 264 (275)
T 3hyh_A 254 RISIHEIMQDD 264 (275)
T ss_dssp SCCHHHHHHCH
T ss_pred CcCHHHHHcCc
Confidence 99999999863
|
| >3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-53 Score=396.38 Aligned_cols=243 Identities=16% Similarity=0.218 Sum_probs=192.7
Q ss_pred CCCcccceeeeecceecccccCCCchhhhHHHHHHHHHhcCCCcCcceeEEEEEeCC----eeeEEEecCCCCCHHhHhc
Q 014478 2 GGRCSKFSICWFHCHLKSSVLESSDLGETLNLEEAKAVGNLRSERLANLIGCCYEAD----ERLLVAEFMPNETLAKHLF 77 (424)
Q Consensus 2 G~~g~v~~~~~~~~~v~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~----~~~lv~e~~~~gsL~~~l~ 77 (424)
||||.||++.|.+..||+|++.........+..|+..+.+++|||||+++|+|.+++ .++||||||+||+|.+++.
T Consensus 14 G~fG~Vy~~~~~g~~VAvK~l~~~~~~~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~~lV~Ey~~~gsL~~~l~ 93 (303)
T 3hmm_A 14 GRFGEVWRGKWRGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLN 93 (303)
T ss_dssp CSSSEEEEEEETTEEEEEEEECGGGHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEEECCTTCBHHHHHH
T ss_pred CCCeEEEEEEECCEEEEEEEECccchhhHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceEEEEEecCCCCCcHHHHHH
Confidence 999999999999999999998766544444456777778899999999999998754 4789999999999999996
Q ss_pred cCCCCCCCHHHHHHHHHHHHHHHHHHHhC--------CCcccccCCCCCeeecCCCCeEEccccccccCCCC--------
Q 014478 78 HWETQPMKWAMRLRVALYLAQALEYCSSK--------GRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG-------- 141 (424)
Q Consensus 78 ~~~~~~l~~~~~~~i~~qi~~~L~~lH~~--------~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~-------- 141 (424)
. .++++.++++++.|++.||.|||++ + ||||||||+|||++.++++||+|||+++.....
T Consensus 94 ~---~~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~-IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~~~~~~~~~ 169 (303)
T 3hmm_A 94 R---YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPA-IAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAP 169 (303)
T ss_dssp H---CCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCC-EECSCCCGGGEEECTTSCEEECCCTTCEEEETTTTEESCC-
T ss_pred h---CCCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCC-EeeccCCcccEEECCCCCEEEEeCCCCccccCCCCceeeec
Confidence 4 5799999999999999999999987 7 999999999999999999999999999865432
Q ss_pred CccccCccCCCccccccC------CCCCCcceehhHHHHHHHhhCCCCCCchhhH------HH----hhhhh-hHhhhcc
Q 014478 142 KSYSTNLAFTPPEYMRTG------RVTPESVVYSFGTMLLDLLSGKHIPPSHALD------LI----RSKNF-LLLMDSA 204 (424)
Q Consensus 142 ~~~~gt~~y~aPE~~~~~------~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~------~~----~~~~~-~~~~~~~ 204 (424)
....||+.|||||++.+. .++.++|||||||++|||+||..|+...... .. ..... .......
T Consensus 170 ~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~ 249 (303)
T 3hmm_A 170 NHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQK 249 (303)
T ss_dssp ----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTSC
T ss_pred ccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCCccccccccchhcccccchHHHHHHHHhccc
Confidence 234699999999999754 4678999999999999999998654321100 00 00011 1112222
Q ss_pred cCCCCCc-----hhHHHHHHHHHHhcccCcCCCCCHHHHHHHHHHHhhh
Q 014478 205 LEGHFSN-----DEGTELVRLASRCLQSEARERPNAKSLVISLMSLQKE 248 (424)
Q Consensus 205 ~~~~~~~-----~~~~~l~~li~~cl~~dp~~Rps~~~~~~~l~~~~~~ 248 (424)
.++..|. .++..+.+|+.+||+.||++|||+.+|++.|+++.++
T Consensus 250 ~rp~~p~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~~l~~~ 298 (303)
T 3hmm_A 250 LRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQ 298 (303)
T ss_dssp CCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred CCCCCCccccchHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHHHHHH
Confidence 3333332 4567899999999999999999999999999988764
|
| >3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.9e-54 Score=394.15 Aligned_cols=231 Identities=19% Similarity=0.214 Sum_probs=190.0
Q ss_pred CCCcccceeee-----ecceecccccCCCc---hhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHH
Q 014478 2 GGRCSKFSICW-----FHCHLKSSVLESSD---LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLA 73 (424)
Q Consensus 2 G~~g~v~~~~~-----~~~~v~~~~~~~~~---~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~ 73 (424)
||||.||.+.. .+..+|+|++.... .....+.+|+++|++++|||||++++++.+++..|||||||+||+|.
T Consensus 35 G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~ivmEy~~gg~L~ 114 (304)
T 3ubd_A 35 GSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLF 114 (304)
T ss_dssp GGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEEEEETTEEEEEECCCTTCEEH
T ss_pred CCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEEEcCCCCCHH
Confidence 89999999876 34568888886543 23457889999999999999999999999999999999999999999
Q ss_pred hHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCC----CCccccCcc
Q 014478 74 KHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRD----GKSYSTNLA 149 (424)
Q Consensus 74 ~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~----~~~~~gt~~ 149 (424)
+++.+ .+.+++.++..++.||+.||.|||+++ ||||||||+|||++.+|.+||+|||+|+.... .....||+.
T Consensus 115 ~~l~~--~~~l~e~~~~~~~~qi~~aL~ylH~~~-IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~~~~~~~~GT~~ 191 (304)
T 3ubd_A 115 TRLSK--EVMFTEEDVKFYLAELALALDHLHSLG-IIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVE 191 (304)
T ss_dssp HHHHH--HCCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSSCCGGGEEECTTSCEEEESSEEEEC-----CCCCSCCCCGG
T ss_pred HHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC-CcCCCCCHHHeEEcCCCCEEecccccceeccCCCccccccccCcc
Confidence 99975 467999999999999999999999999 99999999999999999999999999986532 235679999
Q ss_pred CCCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHHHHHHHHHhcccCc
Q 014478 150 FTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEA 229 (424)
Q Consensus 150 y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp 229 (424)
|||||++.+..++.++|||||||++|||+||+.||........ ...+... ....|..+++++.+||.+||+.||
T Consensus 192 YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~~~----~~~i~~~--~~~~p~~~s~~~~~li~~~L~~dP 265 (304)
T 3ubd_A 192 YMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKET----MTMILKA--KLGMPQFLSPEAQSLLRMLFKRNP 265 (304)
T ss_dssp GCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH----HHHHHHC--CCCCCTTSCHHHHHHHHHHTCSSG
T ss_pred cCCHHHhccCCCCCCCcccchHHHHHHHHhCCCCCCCcCHHHH----HHHHHcC--CCCCCCcCCHHHHHHHHHHcccCH
Confidence 9999999999999999999999999999999999886532222 1112222 224566788999999999999999
Q ss_pred CCCCCH-----HHHHHH
Q 014478 230 RERPNA-----KSLVIS 241 (424)
Q Consensus 230 ~~Rps~-----~~~~~~ 241 (424)
++|||+ +|+++|
T Consensus 266 ~~R~ta~~~~~~eil~H 282 (304)
T 3ubd_A 266 ANRLGAGPDGVEEIKRH 282 (304)
T ss_dssp GGSTTCSTTTHHHHHTS
T ss_pred HHCCCCCcCCHHHHHcC
Confidence 999984 677654
|
| >4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-51 Score=381.08 Aligned_cols=229 Identities=18% Similarity=0.271 Sum_probs=177.9
Q ss_pred CCCcccceeee--ecceecccccCC--CchhhhHHHHHHHHHhcCCCcCcceeEEEEEeCC------------eeeEEEe
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLES--SDLGETLNLEEAKAVGNLRSERLANLIGCCYEAD------------ERLLVAE 65 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~------------~~~lv~e 65 (424)
||||.||.+.+ .+..||+|++.. .....+.+.+|+++|++|+|||||++++++.+.+ ..|||||
T Consensus 16 G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~~~~~~~l~ivmE 95 (299)
T 4g31_A 16 GGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQPSSPKVYLYIQMQ 95 (299)
T ss_dssp CC--EEEEEEETTTCCEEEEEEEEECSSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC----------CEEEEEEEE
T ss_pred CCCeEEEEEEECCCCCEEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCccccccccCCCcEEEEEEe
Confidence 99999999988 477888888753 3344678999999999999999999999997654 3689999
Q ss_pred cCCCCCHHhHhccCCC-CCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCC---
Q 014478 66 FMPNETLAKHLFHWET-QPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG--- 141 (424)
Q Consensus 66 ~~~~gsL~~~l~~~~~-~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~--- 141 (424)
||+||+|.+++..... ...++..++.++.||+.||.|||+++ ||||||||+|||++.+|.+||+|||+|+.....
T Consensus 96 ~~~gg~L~~~l~~~~~~~~~~~~~~~~i~~qi~~al~ylH~~~-IiHRDlKp~NILl~~~~~vKl~DFGla~~~~~~~~~ 174 (299)
T 4g31_A 96 LCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLHSKG-LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEE 174 (299)
T ss_dssp CCCSCCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEECTTCCEEECCCCCC---------
T ss_pred cCCCCcHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHHHCc-CccccCcHHHeEECCCCcEEEccCccceecCCCccc
Confidence 9999999999964221 23456778999999999999999999 999999999999999999999999999865432
Q ss_pred -------------CccccCccCCCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhcccCCC
Q 014478 142 -------------KSYSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGH 208 (424)
Q Consensus 142 -------------~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (424)
...+||+.|||||++.+..++.++|||||||++|||++ ||...... . ....... ...
T Consensus 175 ~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyell~---Pf~~~~~~-~--~~~~~~~----~~~ 244 (299)
T 4g31_A 175 QTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---PFSTQMER-V--RTLTDVR----NLK 244 (299)
T ss_dssp -----------------CCCTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHS---CCSSHHHH-H--HHHHHHH----TTC
T ss_pred cccccccccccccCCcccCccccCHHHHcCCCCCCHHHHHHHHHHHHHHcc---CCCCccHH-H--HHHHHHh----cCC
Confidence 22469999999999999999999999999999999996 55543111 0 1111111 112
Q ss_pred CC---chhHHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 014478 209 FS---NDEGTELVRLASRCLQSEARERPNAKSLVIS 241 (424)
Q Consensus 209 ~~---~~~~~~l~~li~~cl~~dp~~Rps~~~~~~~ 241 (424)
.| ...++.+.+||.+||+.||++|||+.+++++
T Consensus 245 ~p~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~h 280 (299)
T 4g31_A 245 FPPLFTQKYPCEYVMVQDMLSPSPMERPEAINIIEN 280 (299)
T ss_dssp CCHHHHHHCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred CCCCCcccCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 23 2345678899999999999999999999864
|
| >4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-48 Score=374.05 Aligned_cols=236 Identities=15% Similarity=0.196 Sum_probs=189.7
Q ss_pred CCCcccceeee--ecceecccccCCCc---hhhhHHHHHHHHHhcCCCcCcceeEEEEEeC------CeeeEEEecCCCC
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESSD---LGETLNLEEAKAVGNLRSERLANLIGCCYEA------DERLLVAEFMPNE 70 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~~---~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~------~~~~lv~e~~~~g 70 (424)
|+||.||.+.+ .+..||+|++.... ...+.+.+|+++|+.|+|||||++++++... +.+|||||||+ |
T Consensus 65 G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~~~~~ivmE~~~-g 143 (398)
T 4b99_A 65 GAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKSVYVVLDLME-S 143 (398)
T ss_dssp CSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTCCCEEEEEECCS-E
T ss_pred ccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccCCEEEEEEeCCC-C
Confidence 89999999987 57889999886443 3356788999999999999999999998643 56899999996 5
Q ss_pred CHHhHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCC--------CC
Q 014478 71 TLAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRD--------GK 142 (424)
Q Consensus 71 sL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~--------~~ 142 (424)
+|.+++.. .+++++.++..++.||+.||.|||+++ ||||||||+|||++.+|.+||+|||+++.... ..
T Consensus 144 ~L~~~i~~--~~~l~~~~~~~~~~qil~al~ylH~~~-iiHRDlKP~NIl~~~~~~~Ki~DFGla~~~~~~~~~~~~~~~ 220 (398)
T 4b99_A 144 DLHQIIHS--SQPLTLEHVRYFLYQLLRGLKYMHSAQ-VIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMT 220 (398)
T ss_dssp EHHHHHTS--SSCCCHHHHHHHHHHHHHHHHHHHHTT-CBCCCCCGGGEEECTTCCEEECCCTTCBCC-------CCCCC
T ss_pred CHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCc-CcCCCcCccccccCCCCCEEEeecceeeecccCccccccccc
Confidence 89999964 568999999999999999999999999 99999999999999999999999999986532 23
Q ss_pred ccccCccCCCccccccC-CCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhh------------------c
Q 014478 143 SYSTNLAFTPPEYMRTG-RVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMD------------------S 203 (424)
Q Consensus 143 ~~~gt~~y~aPE~~~~~-~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~------------------~ 203 (424)
...||+.|||||++.+. .++.++||||+||++|||++|+.||++......-......... .
T Consensus 221 ~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g~~~~~~l~~I~~~~g~p~~~~~~~~~~~~~~~~~~ 300 (398)
T 4b99_A 221 EYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSPAVIQAVGAERVRAYIQ 300 (398)
T ss_dssp SSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHHHHHHHHHHHCCCCGGGTC-----CHHHHHH
T ss_pred cceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCChHHhhhhhhhhhhhhhh
Confidence 56899999999998875 4689999999999999999999999865322111110000000 0
Q ss_pred ccCCCC-------CchhHHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 014478 204 ALEGHF-------SNDEGTELVRLASRCLQSEARERPNAKSLVIS 241 (424)
Q Consensus 204 ~~~~~~-------~~~~~~~l~~li~~cl~~dp~~Rps~~~~~~~ 241 (424)
...... .+.+++++.+||.+||..||++|||++++++|
T Consensus 301 ~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~H 345 (398)
T 4b99_A 301 SLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALRH 345 (398)
T ss_dssp SSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSTTTSCCHHHHTTS
T ss_pred cCCCcCCCCHHHhCCCCCHHHHHHHHHHCcCChhHCcCHHHHhcC
Confidence 000001 12357789999999999999999999999865
|
| >4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.9e-48 Score=364.64 Aligned_cols=233 Identities=18% Similarity=0.204 Sum_probs=185.1
Q ss_pred CCCcccceeeee-----cceecccccCCCchhhhHHHHHHHHHhcC-CCcCcceeEEEEEeCCeeeEEEecCCCCCHHhH
Q 014478 2 GGRCSKFSICWF-----HCHLKSSVLESSDLGETLNLEEAKAVGNL-RSERLANLIGCCYEADERLLVAEFMPNETLAKH 75 (424)
Q Consensus 2 G~~g~v~~~~~~-----~~~v~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~ 75 (424)
|+||.||.+... +..||+|++.... ....+.+|+++|+.+ +||||+++++++.+++..||||||++||+|.++
T Consensus 32 G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~-~~~~~~~E~~~l~~~~~h~nIv~l~~~~~~~~~~~lvmE~~~g~~L~~~ 110 (361)
T 4f9c_A 32 GTFSSVYLATAQLQVGPEEKIALKHLIPTS-HPIRIAAELQCLTVAGGQDNVMGVKYCFRKNDHVVIAMPYLEHESFLDI 110 (361)
T ss_dssp CSSEEEEEEEEEBTTSCEEEEEEEEECTTS-CHHHHHHHHHHHHHTCSBTTBCCCSEEEEETTEEEEEEECCCCCCHHHH
T ss_pred ccCcEEEEEEEcccCCCCCEEEEEEEcccc-CHHHHHHHHHHHHHhcCCCCCceEEEEEEECCEEEEEEeCCCcccHHHH
Confidence 999999999763 5668888776544 345688999999998 699999999999999999999999999999999
Q ss_pred hccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCC-CCeEEccccccccCCCC-------------
Q 014478 76 LFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKD-GNPRLSSFGLMKNSRDG------------- 141 (424)
Q Consensus 76 l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~-~~~kl~Dfg~~~~~~~~------------- 141 (424)
+. .+++.++..++.||+.||.|||++| ||||||||+|||++.+ +.+||+|||+|+.....
T Consensus 111 ~~-----~l~~~~~~~~~~qll~al~ylH~~g-IiHRDiKPeNiLl~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~ 184 (361)
T 4f9c_A 111 LN-----SLSFQEVREYMLNLFKALKRIHQFG-IVHRDVKPSNFLYNRRLKKYALVDFGLAQGTHDTKIELLKFVQSEAQ 184 (361)
T ss_dssp HT-----TCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEEETTTTEEEECCCTTCEECTTCSCGGGGGC-----
T ss_pred Hc-----CCCHHHHHHHHHHHHHHHHHHHHCC-eEeCcCCHHHeEEeCCCCeEEECcCCCCcccCCcccccccccccccc
Confidence 83 4899999999999999999999999 9999999999999876 79999999999754321
Q ss_pred -------------------CccccCccCCCccccccCC-CCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhH--
Q 014478 142 -------------------KSYSTNLAFTPPEYMRTGR-VTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLL-- 199 (424)
Q Consensus 142 -------------------~~~~gt~~y~aPE~~~~~~-~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~-- 199 (424)
...+||+.|||||++.+.. ++.++||||+||++|||++|+.||.....+......+..
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~il~ell~G~~Pf~~~~~~~~~l~~I~~~~ 264 (361)
T 4f9c_A 185 QERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRYPFYKASDDLTALAQIMTIR 264 (361)
T ss_dssp ---------------------CCCCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHH
T ss_pred ccccccccccccccccccccccccCccccCHHHHcCCCCCCCccchhhhHHHHHHHHHCCCCCCCCCCHHHHHHHHHHhc
Confidence 1246999999999998764 899999999999999999999888543211100000000
Q ss_pred -----------------------------hhh------c------------ccCCCCCchhHHHHHHHHHHhcccCcCCC
Q 014478 200 -----------------------------LMD------S------------ALEGHFSNDEGTELVRLASRCLQSEARER 232 (424)
Q Consensus 200 -----------------------------~~~------~------------~~~~~~~~~~~~~l~~li~~cl~~dp~~R 232 (424)
... . .........+++++.+||.+||+.||++|
T Consensus 265 G~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~is~~a~DLl~~lL~~dP~~R 344 (361)
T 4f9c_A 265 GSRETIQAAKTFGKSILCSKEVPAQDLRKLCERLRGMDSSTPKLTSDIQGHATNLEGWNEVPDEAYDLLDKLLDLNPASR 344 (361)
T ss_dssp CHHHHHHHHHHTTEEEEESSCCCCCCHHHHHHHHC----------------------CTTCCHHHHHHHHHHTCSCTTTS
T ss_pred CCccchhhhhhccccccccccCcchhhhHHHHhhccccccccccccccccccccccccccCCHHHHHHHHHHCcCChhHC
Confidence 000 0 00001123457789999999999999999
Q ss_pred CCHHHHHHH
Q 014478 233 PNAKSLVIS 241 (424)
Q Consensus 233 ps~~~~~~~ 241 (424)
||++|+++|
T Consensus 345 ~ta~eaL~H 353 (361)
T 4f9c_A 345 ITAEEALLH 353 (361)
T ss_dssp CCHHHHHTS
T ss_pred cCHHHHhcC
Confidence 999999865
|
| >3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A | Back alignment and structure |
|---|
Probab=100.00 E-value=7.6e-48 Score=386.03 Aligned_cols=234 Identities=15% Similarity=0.145 Sum_probs=198.4
Q ss_pred CCCcccceeee--ecceecccccCCCc-hhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHhHhcc
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESSD-LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFH 78 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~ 78 (424)
|+||.||++.. .+..+|+|++.... ...+.+.+|+++|+.|+|||||+++++|.+++..|||||||+||+|.+++..
T Consensus 168 G~fg~V~~~~~~~tg~~~AiK~i~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iv~E~~~gg~L~~~i~~ 247 (573)
T 3uto_A 168 GAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVAD 247 (573)
T ss_dssp ETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEECSSEEEEEEECCCCCBHHHHHTC
T ss_pred ccCeEEEEEEECCCCCEEEEEEEeccchhhHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeecCCCcHHHHHHH
Confidence 89999999987 57788888775543 4467888999999999999999999999999999999999999999999964
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCC--CCeEEccccccccCCCCC---ccccCccCCCc
Q 014478 79 WETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKD--GNPRLSSFGLMKNSRDGK---SYSTNLAFTPP 153 (424)
Q Consensus 79 ~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~--~~~kl~Dfg~~~~~~~~~---~~~gt~~y~aP 153 (424)
....+++.++..++.||+.||.|||+++ |+||||||+|||++.+ +.+||+|||+++...... ..+||+.||||
T Consensus 248 -~~~~l~e~~~~~~~~qi~~al~ylH~~~-iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~~~~~~~~~~~~GT~~y~AP 325 (573)
T 3uto_A 248 -EHNKMSEDEAVEYMRQVCKGLCHMHENN-YVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTTGTAEFAAP 325 (573)
T ss_dssp -TTSCEEHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEESSSSCCCEEECCCSSCEECCTTSEEEEECSSGGGCCH
T ss_pred -hCCCCCHHHHHHHHHHHHHHHHHHHHCC-eeeccCChhhccccCCCCCCEEEeeccceeEccCCCceeeeEECccccCH
Confidence 3457999999999999999999999999 9999999999999754 899999999999876543 45799999999
Q ss_pred cccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhh--cccCCCCCchhHHHHHHHHHHhcccCcCC
Q 014478 154 EYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMD--SALEGHFSNDEGTELVRLASRCLQSEARE 231 (424)
Q Consensus 154 E~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~li~~cl~~dp~~ 231 (424)
|++.+..++.++|||||||++|||++|..||........ ...+.. ..........+++++.+||.+||..||.+
T Consensus 326 Ev~~~~~y~~~~DiWSlGvilyeml~G~~Pf~~~~~~~~----~~~i~~~~~~~~~~~~~~~s~~~~dli~~~L~~dp~~ 401 (573)
T 3uto_A 326 EVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDET----LRNVKSCDWNMDDSAFSGISEDGKDFIRKLLLADPNT 401 (573)
T ss_dssp HHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHH----HHHHHTTCCCCCSGGGTTSCHHHHHHHHTTSCSSGGG
T ss_pred HHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHH----HHHHHhCCCCCCcccccCCCHHHHHHHHHHccCChhH
Confidence 999999999999999999999999999999886532211 111111 11222223457889999999999999999
Q ss_pred CCCHHHHHHH
Q 014478 232 RPNAKSLVIS 241 (424)
Q Consensus 232 Rps~~~~~~~ 241 (424)
|||+.++++|
T Consensus 402 R~t~~e~l~H 411 (573)
T 3uto_A 402 RMTIHQALEH 411 (573)
T ss_dssp SCCHHHHHHS
T ss_pred CcCHHHHhcC
Confidence 9999999875
|
| >3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-47 Score=382.14 Aligned_cols=234 Identities=20% Similarity=0.207 Sum_probs=193.0
Q ss_pred CCCcccceeee--ecceecccccCCCch----hhhHHHH---HHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCH
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESSDL----GETLNLE---EAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETL 72 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~~~----~~~~~~~---E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL 72 (424)
||||.||.+.. .+..+|+|++.+... ....+.+ ++.+++.++|||||+++++|.+.+.+|||||||+||+|
T Consensus 200 G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~~~lylVmEy~~GGdL 279 (689)
T 3v5w_A 200 GGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDL 279 (689)
T ss_dssp CSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEEEEEECCCCSCBH
T ss_pred ccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEECCEEEEEEecCCCCcH
Confidence 99999999987 677889988854321 1223333 46777888999999999999999999999999999999
Q ss_pred HhHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCC--CccccCccC
Q 014478 73 AKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG--KSYSTNLAF 150 (424)
Q Consensus 73 ~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~--~~~~gt~~y 150 (424)
.++|.+ .+.+++..+..++.||+.||.|||+++ ||||||||+||||+.+|++||+|||+|+..... .+.+||+.|
T Consensus 280 ~~~l~~--~~~l~E~~a~~y~~qIl~aL~yLH~~g-IiHRDLKPeNILld~~G~vKL~DFGlA~~~~~~~~~t~~GTp~Y 356 (689)
T 3v5w_A 280 HYHLSQ--HGVFSEADMRFYAAEIILGLEHMHNRF-VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVGTHGY 356 (689)
T ss_dssp HHHHHH--HCCCCHHHHHHHHHHHHHHHHHHHTTT-EECCCCSGGGEEECTTSCEEECCCTTCEECSSCCCCSCCSCGGG
T ss_pred HHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC-ccccCCchHHeEEeCCCCEEecccceeeecCCCCCCCccCCcCc
Confidence 999975 467999999999999999999999999 999999999999999999999999999876543 456899999
Q ss_pred CCcccccc-CCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHHHHHHHHHhcccCc
Q 014478 151 TPPEYMRT-GRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEA 229 (424)
Q Consensus 151 ~aPE~~~~-~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp 229 (424)
||||++.+ ..|+.++|+|||||++|||++|..||......... ....... .....+|..+++++.+||.+||+.||
T Consensus 357 mAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~~~~~-~i~~~i~--~~~~~~p~~~S~~a~dLI~~lL~~dP 433 (689)
T 3v5w_A 357 MAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKH-EIDRMTL--TMAVELPDSFSPELRSLLEGLLQRDV 433 (689)
T ss_dssp CCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGCCCHH-HHHHHHH--HCCCCCCTTSCHHHHHHHHHHTCSCG
T ss_pred cCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHH-HHHHhhc--CCCCCCCccCCHHHHHHHHHHccCCH
Confidence 99999975 47999999999999999999999998764211110 0111111 12234567789999999999999999
Q ss_pred CCCCC-----HHHHHHH
Q 014478 230 RERPN-----AKSLVIS 241 (424)
Q Consensus 230 ~~Rps-----~~~~~~~ 241 (424)
.+|++ +++|++|
T Consensus 434 ~~Rl~~~~~ga~ei~~H 450 (689)
T 3v5w_A 434 NRRLGCLGRGAQEVKES 450 (689)
T ss_dssp GGCTTCSSSTHHHHTTS
T ss_pred hHCCCCCCCCHHHHhcC
Confidence 99998 6888765
|
| >2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-46 Score=358.61 Aligned_cols=294 Identities=19% Similarity=0.227 Sum_probs=195.7
Q ss_pred CCCcccceeeee-----cceecccccCCC--chhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHh
Q 014478 2 GGRCSKFSICWF-----HCHLKSSVLESS--DLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAK 74 (424)
Q Consensus 2 G~~g~v~~~~~~-----~~~v~~~~~~~~--~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~ 74 (424)
|+||.||.+.+. +..|++|++... ....+.|.+|+.++.+++||||+++++++...+..++||||+++|+|.+
T Consensus 56 G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~sL~~ 135 (373)
T 2qol_A 56 GEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDS 135 (373)
T ss_dssp CSSSEEEEC-CBCTTSCBCCEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEEEEECCTTCBHHH
T ss_pred CCCeEEEEEEEecCCCCceeEEEEEecCccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCceEEEEeCCCCCcHHH
Confidence 899999999874 556888877643 3446789999999999999999999999999999999999999999999
Q ss_pred HhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCCC-------ccccC
Q 014478 75 HLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGK-------SYSTN 147 (424)
Q Consensus 75 ~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~~-------~~~gt 147 (424)
++.. .+..+++.+++.++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++...... ...+|
T Consensus 136 ~l~~-~~~~~~~~~~~~i~~qi~~aL~~LH~~~-ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~ 213 (373)
T 2qol_A 136 FLRK-HDAQFTVIQLVGMLRGIASGMKYLSDMG-YVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYTTRGGKIP 213 (373)
T ss_dssp HHHT-TTTCSCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEECTTCCEEECCC----------------------
T ss_pred HHHh-CCCCCCHHHHHHHHHHHHHHHHHHHHCC-eeCCCCCcceEEEcCCCCEEECcCccccccccCCccceeccCCCcC
Confidence 9965 3457999999999999999999999999 9999999999999999999999999998654321 12346
Q ss_pred ccCCCccccccCCCCCCcceehhHHHHHHHhh-CCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHHHHHHHHHhcc
Q 014478 148 LAFTPPEYMRTGRVTPESVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQ 226 (424)
Q Consensus 148 ~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~ 226 (424)
+.|+|||++.+..++.++|||||||++|||++ |..||..... ......+........+..++.++.+++.+||+
T Consensus 214 ~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~~P~~~~~~-----~~~~~~i~~~~~~~~~~~~~~~l~~li~~cl~ 288 (373)
T 2qol_A 214 IRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSN-----QDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQ 288 (373)
T ss_dssp CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-CTTTTCCH-----HHHHHHHHTTEECCCCTTCBHHHHHHHHHHTC
T ss_pred CCccChhhhccCCcCchhcHHHHHHHHHHHHhCCCCCCCCCCH-----HHHHHHHHcCCCCCCCccccHHHHHHHHHHhC
Confidence 78999999998899999999999999999998 8888765422 22223333334445566778899999999999
Q ss_pred cCcCCCCCHHHHHHHHHHHhhhhhcCCchhhhccc----CCCCCCCCCCCCCcccccccccchhHHHHHHHhccccCCcc
Q 014478 227 SEARERPNAKSLVISLMSLQKEAEQVPSYVLLGIQ----HETAPSTKPLSLTPLGEACSRLDLTAIHEILEGMGYKDDEG 302 (424)
Q Consensus 227 ~dp~~Rps~~~~~~~l~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~ 302 (424)
.||.+|||+.++++.|+.+................ .................|.+........+.|...|+.+.+.
T Consensus 289 ~dp~~RPs~~~i~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~ 368 (373)
T 2qol_A 289 KDRNNRPKFEQIVSILDKLIRNPGSLKIITSAAARPSNLLLDQSNVDITTFRTTGDWLNGVWTAHCKEIFTGVEYSSCDT 368 (373)
T ss_dssp SSGGGSCCHHHHHHHHHHHHHCGGGGGSBCCC----CCCEEC--------------------------------------
T ss_pred cChhhCcCHHHHHHHHHHHHhCccccccccCCCCCCcccccCCCCccccCCCCHHHHHHhccchHHHHHHHhcCCCcHHH
Confidence 99999999999999999987754322111100000 00011112223345566777777778888888877776654
|
| >3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.3e-46 Score=345.53 Aligned_cols=245 Identities=19% Similarity=0.254 Sum_probs=198.2
Q ss_pred CCCcccceeeeecceecccccCCCc---hhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHhHhcc
Q 014478 2 GGRCSKFSICWFHCHLKSSVLESSD---LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFH 78 (424)
Q Consensus 2 G~~g~v~~~~~~~~~v~~~~~~~~~---~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~ 78 (424)
||||.||.+.+.+..+++|++.... ...+.+.+|++++++++||||+++++++......++||||+++|+|.+++..
T Consensus 48 G~~g~V~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~ 127 (309)
T 3p86_A 48 GSFGTVHRAEWHGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHK 127 (309)
T ss_dssp CSSEEEEEEEETTEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTCCEEEEECCTTCBHHHHHHS
T ss_pred CCCeEEEEEEECCCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCceEEEEecCCCCcHHHHHhh
Confidence 8999999999999999998886543 3356788999999999999999999999999999999999999999999964
Q ss_pred CC-CCCCCHHHHHHHHHHHHHHHHHHHhCCC-cccccCCCCCeeecCCCCeEEccccccccCCCC----CccccCccCCC
Q 014478 79 WE-TQPMKWAMRLRVALYLAQALEYCSSKGR-ALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG----KSYSTNLAFTP 152 (424)
Q Consensus 79 ~~-~~~l~~~~~~~i~~qi~~~L~~lH~~~~-ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~----~~~~gt~~y~a 152 (424)
.. ...+++..++.++.|++.||.|||++++ |+||||||+|||++.++.+||+|||+++..... ....||+.|+|
T Consensus 128 ~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~~~~~~~~~~~~gt~~y~a 207 (309)
T 3p86_A 128 SGAREQLDERRRLSMAYDVAKGMNYLHNRNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTFLSSKSAAGTPEWMA 207 (309)
T ss_dssp TTHHHHSCHHHHHHHHHHHHHHHHHHHTSSSCCCCTTCCGGGEEECTTCCEEECCCC-----------------CCTTSC
T ss_pred cCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCEECCCCChhhEEEeCCCcEEECCCCCCccccccccccccCCCCccccC
Confidence 21 1238999999999999999999999863 999999999999999999999999998764432 34578999999
Q ss_pred ccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHHHHHHHHHhcccCcCCC
Q 014478 153 PEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARER 232 (424)
Q Consensus 153 PE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~R 232 (424)
||++.+..++.++|||||||++|+|++|..||....... ..............+..+++++.++|.+||+.||.+|
T Consensus 208 PE~~~~~~~~~~~DiwslG~il~elltg~~Pf~~~~~~~----~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~R 283 (309)
T 3p86_A 208 PEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQ----VVAAVGFKCKRLEIPRNLNPQVAAIIEGCWTNEPWKR 283 (309)
T ss_dssp HHHHTTCCCCTTHHHHHHHHHHHHHHHCCCTTTTSCHHH----HHHHHHHSCCCCCCCTTSCHHHHHHHHHHTCSSGGGS
T ss_pred hhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH----HHHHHHhcCCCCCCCccCCHHHHHHHHHHccCChhhC
Confidence 999998889999999999999999999998887642211 1111222233445667788999999999999999999
Q ss_pred CCHHHHHHHHHHHhhhhh
Q 014478 233 PNAKSLVISLMSLQKEAE 250 (424)
Q Consensus 233 ps~~~~~~~l~~~~~~~~ 250 (424)
||+.++++.|+.+.+...
T Consensus 284 ps~~~ll~~L~~~~~~~~ 301 (309)
T 3p86_A 284 PSFATIMDLLRPLIKSAV 301 (309)
T ss_dssp CCHHHHHHHHHHHHC---
T ss_pred cCHHHHHHHHHHHHHhCC
Confidence 999999999999887543
|
| >3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.3e-46 Score=347.76 Aligned_cols=242 Identities=19% Similarity=0.244 Sum_probs=202.6
Q ss_pred CCCcccceeeee-----cceecccccCC--CchhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHh
Q 014478 2 GGRCSKFSICWF-----HCHLKSSVLES--SDLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAK 74 (424)
Q Consensus 2 G~~g~v~~~~~~-----~~~v~~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~ 74 (424)
|+||.||.+.+. +..|++|++.. .....+.|.+|+.++++++||||+++++++.+++..++||||++||+|.+
T Consensus 60 G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~ 139 (325)
T 3kul_A 60 GDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDT 139 (325)
T ss_dssp TTTEEEEEEEECCTTSCCEEEEEEEECTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECGGGCCEEEEECCTTCBHHH
T ss_pred CCCcEEEEEEEecCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCccEEEeeCCCCCcHHH
Confidence 899999999883 33478887765 33446789999999999999999999999999989999999999999999
Q ss_pred HhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCCC-------ccccC
Q 014478 75 HLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGK-------SYSTN 147 (424)
Q Consensus 75 ~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~~-------~~~gt 147 (424)
++.. ....+++.+++.++.|++.||.|||+++ |+||||||+|||++.++.+||+|||+++...... ...+|
T Consensus 140 ~l~~-~~~~~~~~~~~~i~~qi~~~L~~LH~~~-ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~t 217 (325)
T 3kul_A 140 FLRT-HDGQFTIMQLVGMLRGVGAGMRYLSDLG-YVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYTTTGGKIP 217 (325)
T ss_dssp HHHT-TTTCSCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEECTTCCEEECCCSSCEECC----CCEECC---CC
T ss_pred HHHh-cccCCCHHHHHHHHHHHHHHHHHHHHCC-eeCCCCCcceEEECCCCCEEECCCCcccccccCccceeeccCCCCc
Confidence 9965 3457999999999999999999999999 9999999999999999999999999998765331 22356
Q ss_pred ccCCCccccccCCCCCCcceehhHHHHHHHhh-CCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHHHHHHHHHhcc
Q 014478 148 LAFTPPEYMRTGRVTPESVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQ 226 (424)
Q Consensus 148 ~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~ 226 (424)
+.|+|||++.+..++.++|||||||++|+|++ |..||..... ......+........+..+++++.+++.+||.
T Consensus 218 ~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~ 292 (325)
T 3kul_A 218 IRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTN-----RDVISSVEEGYRLPAPMGCPHALHQLMLDCWH 292 (325)
T ss_dssp GGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTSCH-----HHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTC
T ss_pred ccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCcccCCH-----HHHHHHHHcCCCCCCCCCcCHHHHHHHHHHcc
Confidence 78999999998899999999999999999999 8888765422 12222233334445666788999999999999
Q ss_pred cCcCCCCCHHHHHHHHHHHhhhhh
Q 014478 227 SEARERPNAKSLVISLMSLQKEAE 250 (424)
Q Consensus 227 ~dp~~Rps~~~~~~~l~~~~~~~~ 250 (424)
.||++|||+.++++.|+.+.+...
T Consensus 293 ~dp~~Rps~~eil~~L~~l~~~~~ 316 (325)
T 3kul_A 293 KDRAQRPRFSQIVSVLDALIRSPE 316 (325)
T ss_dssp SSGGGSCCHHHHHHHHHHHHHSCC
T ss_pred CChhhCcCHHHHHHHHHHHHhCcc
Confidence 999999999999999999887643
|
| >3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-45 Score=344.91 Aligned_cols=243 Identities=19% Similarity=0.253 Sum_probs=202.5
Q ss_pred CCCcccceeee--ecceecccccCC-CchhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHhHhcc
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLES-SDLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFH 78 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~ 78 (424)
|+||.||.+.+ .+..+++|++.. +....+.|.+|++++++++||||+++++++.+++..++||||+++|+|.+++..
T Consensus 21 G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~ 100 (310)
T 3s95_A 21 GCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEYIKGGTLRGIIKS 100 (310)
T ss_dssp CSSEEEEEEEETTTCCEEEEEEESCCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECCTTCBHHHHHHH
T ss_pred CCCEEEEEEEECCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCcCcccEEEEEecCCeeEEEEEecCCCcHHHHHHh
Confidence 89999999998 466777776644 445577899999999999999999999999999999999999999999999975
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCCC----------------
Q 014478 79 WETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGK---------------- 142 (424)
Q Consensus 79 ~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~~---------------- 142 (424)
....+++.+++.++.|++.||.|||+++ |+||||||+|||++.++.+||+|||+++......
T Consensus 101 -~~~~~~~~~~~~i~~qi~~al~~lH~~~-ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (310)
T 3s95_A 101 -MDSQYPWSQRVSFAKDIASGMAYLHSMN-IIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKK 178 (310)
T ss_dssp -CCTTSCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSTTSEEECTTSCEEECCCTTCEECC-------------------
T ss_pred -ccCCCCHHHHHHHHHHHHHHHHHHHhCC-ccCCCCCcCeEEECCCCCEEEeecccceeccccccccccccccccccccc
Confidence 3567999999999999999999999999 9999999999999999999999999998654221
Q ss_pred --ccccCccCCCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhh-hhhhHhhhcccCCCCCchhHHHHHH
Q 014478 143 --SYSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRS-KNFLLLMDSALEGHFSNDEGTELVR 219 (424)
Q Consensus 143 --~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~ 219 (424)
...||+.|+|||++.+..++.++||||||+++|+|++|..|++......... ....... ....+..+++++.+
T Consensus 179 ~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~l~~ 254 (310)
T 3s95_A 179 RYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDFGLNVRGFL----DRYCPPNCPPSFFP 254 (310)
T ss_dssp -CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHTCCSSTTTSCBCTTSSBCHHHHH----HHTCCTTCCTTHHH
T ss_pred ccccCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHhcCCCCCcchhhhHHHHhhhhhccc----cccCCCCCCHHHHH
Confidence 3468999999999999899999999999999999999998776531111111 1111111 12234556778999
Q ss_pred HHHHhcccCcCCCCCHHHHHHHHHHHhhhhh
Q 014478 220 LASRCLQSEARERPNAKSLVISLMSLQKEAE 250 (424)
Q Consensus 220 li~~cl~~dp~~Rps~~~~~~~l~~~~~~~~ 250 (424)
++.+||+.||++|||+.++++.|+.+.....
T Consensus 255 li~~~l~~dP~~Rps~~~l~~~L~~l~~~~~ 285 (310)
T 3s95_A 255 ITVRCCDLDPEKRPSFVKLEHWLETLRMHLA 285 (310)
T ss_dssp HHHHHTCSSGGGSCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHccCChhhCcCHHHHHHHHHHHHHhcc
Confidence 9999999999999999999999999887644
|
| >4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-45 Score=334.61 Aligned_cols=240 Identities=20% Similarity=0.283 Sum_probs=205.5
Q ss_pred CCCcccceeee-ecceecccccCCCchhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHhHhccCC
Q 014478 2 GGRCSKFSICW-FHCHLKSSVLESSDLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWE 80 (424)
Q Consensus 2 G~~g~v~~~~~-~~~~v~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~ 80 (424)
|++|.||.+.+ .+..+++|++.......+.+.+|++++++++||||+++++++.+....++||||+++++|.+++.. .
T Consensus 21 G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-~ 99 (269)
T 4hcu_A 21 GQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRT-Q 99 (269)
T ss_dssp CSSCEEEEEEETTTEEEEEEEECTTSBCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEECCTTCBHHHHHHT-T
T ss_pred CCccEEEEEEecCCCeEEEEEecccccCHHHHHHHHHHHHhCCCCCEeeEEEEEecCCceEEEEEeCCCCcHHHHHHh-c
Confidence 89999999998 566688888877776778899999999999999999999999999999999999999999999965 3
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCC-----CccccCccCCCccc
Q 014478 81 TQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG-----KSYSTNLAFTPPEY 155 (424)
Q Consensus 81 ~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~-----~~~~gt~~y~aPE~ 155 (424)
...+++..++.++.|++.||.|||+++ ++||||||+||+++.++.+||+|||+++..... ....+|+.|+|||.
T Consensus 100 ~~~~~~~~~~~i~~~i~~~l~~lH~~~-i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~ 178 (269)
T 4hcu_A 100 RGLFAAETLLGMCLDVCEGMAYLEEAC-VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEV 178 (269)
T ss_dssp TTCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEECGGGCEEECCTTGGGGBCCHHHHSTTSTTCCGGGCCHHH
T ss_pred CcccCHHHHHHHHHHHHHHHHHHHhCC-eecCCcchheEEEcCCCCEEeccccccccccccccccccCcccccccCCHHH
Confidence 557999999999999999999999999 999999999999999999999999999865432 23456778999999
Q ss_pred cccCCCCCCcceehhHHHHHHHhh-CCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHHHHHHHHHhcccCcCCCCC
Q 014478 156 MRTGRVTPESVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERPN 234 (424)
Q Consensus 156 ~~~~~~~~~~Dv~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps 234 (424)
+.+..++.++||||||+++|+|++ |..||....... ....+........+...++++.+++.+||+.||++|||
T Consensus 179 ~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps 253 (269)
T 4hcu_A 179 FSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSE-----VVEDISTGFRLYKPRLASTHVYQIMNHCWRERPEDRPA 253 (269)
T ss_dssp HHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHH-----HHHHHHTTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCC
T ss_pred hcCCCCCchhhhHHHHHHHHHHhcCCCCCCCCCCHHH-----HHHHHhcCccCCCCCcCCHHHHHHHHHHccCCcccCcC
Confidence 998899999999999999999999 887776542221 12222223334455667889999999999999999999
Q ss_pred HHHHHHHHHHHhhh
Q 014478 235 AKSLVISLMSLQKE 248 (424)
Q Consensus 235 ~~~~~~~l~~~~~~ 248 (424)
+.+++++|+.+.+.
T Consensus 254 ~~~ll~~l~~l~~~ 267 (269)
T 4hcu_A 254 FSRLLRQLAEIAES 267 (269)
T ss_dssp HHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHc
Confidence 99999999988753
|
| >1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-45 Score=358.71 Aligned_cols=240 Identities=21% Similarity=0.304 Sum_probs=205.7
Q ss_pred CCCcccceeeeecceecccccCCCchhhhHHHHHHHHHhcCCCcCcceeEEEEEeCC-eeeEEEecCCCCCHHhHhccCC
Q 014478 2 GGRCSKFSICWFHCHLKSSVLESSDLGETLNLEEAKAVGNLRSERLANLIGCCYEAD-ERLLVAEFMPNETLAKHLFHWE 80 (424)
Q Consensus 2 G~~g~v~~~~~~~~~v~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-~~~lv~e~~~~gsL~~~l~~~~ 80 (424)
|+||.||.+.+.+..|++|++.... ..+.|.+|+++|++++||||+++++++.... ..++||||+++|+|.+++....
T Consensus 204 G~fg~V~~~~~~~~~vavK~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~iv~e~~~~g~L~~~l~~~~ 282 (450)
T 1k9a_A 204 GEFGDVMLGDYRGNKVAVKCIKNDA-TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRG 282 (450)
T ss_dssp CSSEEEEEEEETTEEEEEEEESSCT-TSHHHHHHHHHHHTCCCTTBCCEEEEEECTTSCEEEEEECCTTCBHHHHHHHHC
T ss_pred cCCeeEEEEEecCCeEEEEEeCCch-HHHHHHHHHHHHHhccCCCEEEEEEEEEcCCCceEEEEEecCCCcHHHHHHhcC
Confidence 8999999999999999999887654 5678999999999999999999999988765 6899999999999999997644
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCC-CccccCccCCCccccccC
Q 014478 81 TQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG-KSYSTNLAFTPPEYMRTG 159 (424)
Q Consensus 81 ~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~-~~~~gt~~y~aPE~~~~~ 159 (424)
...+++..++.++.||+.||.|||+++ ++||||||+|||++.++.+||+|||+++..... ....+++.|+|||++.+.
T Consensus 283 ~~~~~~~~~~~~~~qi~~~l~~LH~~~-ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~~y~aPE~~~~~ 361 (450)
T 1k9a_A 283 RSVLGGDCLLKFSLDVCEAMEYLEGNN-FVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWTAPEALREK 361 (450)
T ss_dssp TTTCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCCGGGEEECTTSCEEECCCTTCEECC------CCCTTTSCHHHHHSS
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHhCC-eeCCCCCHhhEEECCCCCEEEeeCCCcccccccccCCCCCcceeCHHHhcCC
Confidence 445899999999999999999999999 999999999999999999999999999865433 234568899999999988
Q ss_pred CCCCCcceehhHHHHHHHhh-CCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHHHHHHHHHhcccCcCCCCCHHHH
Q 014478 160 RVTPESVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERPNAKSL 238 (424)
Q Consensus 160 ~~~~~~Dv~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~~ 238 (424)
.++.++|||||||++|||++ |..||+... .......+........+..+++++.++|.+||+.||++|||+.++
T Consensus 362 ~~~~~sDvwslG~~l~el~t~g~~P~~~~~-----~~~~~~~i~~~~~~~~p~~~~~~l~~li~~cl~~dp~~Rpt~~~l 436 (450)
T 1k9a_A 362 KFSTKSDVWSFGILLWEIYSFGRVPYPRIP-----LKDVVPRVEKGYKMDAPDGCPPAVYDVMKNCWHLDAATRPTFLQL 436 (450)
T ss_dssp CCCHHHHHHHHHHHHHHHHTTTCCSSTTSC-----TTTHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred CCCcHHHHHHHHHHHHHHHhCCCCCCCCCC-----HHHHHHHHHcCCCCCCCCcCCHHHHHHHHHHcCCChhHCcCHHHH
Confidence 99999999999999999998 888877532 122223333444556677889999999999999999999999999
Q ss_pred HHHHHHHhhh
Q 014478 239 VISLMSLQKE 248 (424)
Q Consensus 239 ~~~l~~~~~~ 248 (424)
++.|+.+...
T Consensus 437 ~~~L~~i~~~ 446 (450)
T 1k9a_A 437 REQLEHIRTH 446 (450)
T ss_dssp HHHHHHHHHT
T ss_pred HHHHHHHHHh
Confidence 9999988654
|
| >2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A | Back alignment and structure |
|---|
Probab=100.00 E-value=6.3e-45 Score=347.98 Aligned_cols=241 Identities=18% Similarity=0.281 Sum_probs=202.9
Q ss_pred CCCcccceeeeec---------ceecccccCCCc--hhhhHHHHHHHHHhcC-CCcCcceeEEEEEeCCeeeEEEecCCC
Q 014478 2 GGRCSKFSICWFH---------CHLKSSVLESSD--LGETLNLEEAKAVGNL-RSERLANLIGCCYEADERLLVAEFMPN 69 (424)
Q Consensus 2 G~~g~v~~~~~~~---------~~v~~~~~~~~~--~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~~~~ 69 (424)
|+||.||.+.+.+ ..|++|++.... ...+.+.+|+.+++.+ +||||++++++|...+..++||||+++
T Consensus 92 G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~~~~~lv~e~~~~ 171 (370)
T 2psq_A 92 GCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASK 171 (370)
T ss_dssp CSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCBHHHHHHHHHHHHHHHHSCCCTTBCCEEEEECSSSSCEEEEECCTT
T ss_pred CCCeeEEEEEEecccCcCcCcceeEEEEEecCCcCHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEccCCCEEEEEEcCCC
Confidence 8999999998742 347778775443 3456889999999999 899999999999999999999999999
Q ss_pred CCHHhHhccCC--------------CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEcccccc
Q 014478 70 ETLAKHLFHWE--------------TQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLM 135 (424)
Q Consensus 70 gsL~~~l~~~~--------------~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~ 135 (424)
|+|.+++.... ...+++.+++.++.||+.||.|||+++ |+||||||+|||++.++.+||+|||++
T Consensus 172 g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~-ivHrDlkp~NIll~~~~~~kl~DFG~a 250 (370)
T 2psq_A 172 GNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQK-CIHRDLAARNVLVTENNVMKIADFGLA 250 (370)
T ss_dssp CBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCCGGGEEECTTCCEEECCCSSC
T ss_pred CCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCC-eeccccchhhEEECCCCCEEEccccCC
Confidence 99999997532 235899999999999999999999999 999999999999999999999999999
Q ss_pred ccCCCC------CccccCccCCCccccccCCCCCCcceehhHHHHHHHhh-CCCCCCchhhHHHhhhhhhHhhhcccCCC
Q 014478 136 KNSRDG------KSYSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKNFLLLMDSALEGH 208 (424)
Q Consensus 136 ~~~~~~------~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (424)
+..... ....+|+.|+|||++.+..++.++|||||||++|||++ |..||..... ......+.......
T Consensus 251 ~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~p~~~~~~-----~~~~~~~~~~~~~~ 325 (370)
T 2psq_A 251 RDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPV-----EELFKLLKEGHRMD 325 (370)
T ss_dssp EETTCCCTTCTTTTTTSCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCG-----GGHHHHHHTTCCCC
T ss_pred cccCcccceecccCCCcccceECHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCCCCCCH-----HHHHHHHhcCCCCC
Confidence 865432 22346788999999998899999999999999999999 8877765321 22223333344455
Q ss_pred CCchhHHHHHHHHHHhcccCcCCCCCHHHHHHHHHHHhhh
Q 014478 209 FSNDEGTELVRLASRCLQSEARERPNAKSLVISLMSLQKE 248 (424)
Q Consensus 209 ~~~~~~~~l~~li~~cl~~dp~~Rps~~~~~~~l~~~~~~ 248 (424)
.+..++.++.++|.+||+.||++|||+.++++.|+.+...
T Consensus 326 ~~~~~~~~l~~li~~~l~~dP~~Rpt~~ell~~L~~il~~ 365 (370)
T 2psq_A 326 KPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTL 365 (370)
T ss_dssp CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHH
Confidence 6677889999999999999999999999999999998764
|
| >3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-45 Score=353.25 Aligned_cols=240 Identities=22% Similarity=0.290 Sum_probs=203.6
Q ss_pred CCCcccceeee--ecceecccccCCC--chhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHhHhc
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESS--DLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLF 77 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~--~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~ 77 (424)
|+||.||.+.+ .+..|++|++... ......|.+|+++|++++||||++++++|...+..++||||+++|+|.+++.
T Consensus 125 G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~ 204 (377)
T 3cbl_A 125 GNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLR 204 (377)
T ss_dssp ETTEEEEEEEETTTCCEEEEEECCTTSCHHHHTTTTHHHHHHTTCCCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHH
T ss_pred CCCCeEEEEEEecCCeEEEEEEccccCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEecCCCcEEEEEcCCCCCHHHHHH
Confidence 89999999998 4677888887543 2345678899999999999999999999999889999999999999999996
Q ss_pred cCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCCC------ccccCccCC
Q 014478 78 HWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGK------SYSTNLAFT 151 (424)
Q Consensus 78 ~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~~------~~~gt~~y~ 151 (424)
. .+..+++.+++.++.||+.||.|||+++ ++||||||+|||++.++.+||+|||+++...... ...+++.|+
T Consensus 205 ~-~~~~~~~~~~~~~~~qi~~~l~~LH~~~-ivHrDlkp~Nil~~~~~~~kl~DfG~s~~~~~~~~~~~~~~~~~~~~y~ 282 (377)
T 3cbl_A 205 T-EGARLRVKTLLQMVGDAAAGMEYLESKC-CIHRDLAARNCLVTEKNVLKISDFGMSREEADGVYAASGGLRQVPVKWT 282 (377)
T ss_dssp H-HGGGCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEECTTCCEEECCGGGCEECTTSEEECCSSCCEEEGGGS
T ss_pred h-cCCCCCHHHHHHHHHHHHHHHHHHHHCC-cCCcccCHHHEEEcCCCcEEECcCCCceecCCCceeecCCCCCCCcCcC
Confidence 4 3456899999999999999999999999 9999999999999999999999999998654321 223467899
Q ss_pred CccccccCCCCCCcceehhHHHHHHHhh-CCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHHHHHHHHHhcccCcC
Q 014478 152 PPEYMRTGRVTPESVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEAR 230 (424)
Q Consensus 152 aPE~~~~~~~~~~~Dv~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~ 230 (424)
|||++.++.++.++|||||||++|||++ |..|++.... ......+........+..+++++.+++.+||+.||+
T Consensus 283 aPE~~~~~~~~~~~DvwslG~il~el~t~g~~p~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~ 357 (377)
T 3cbl_A 283 APEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSN-----QQTREFVEKGGRLPCPELCPDAVFRLMEQCWAYEPG 357 (377)
T ss_dssp CHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSSTTSCH-----HHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGG
T ss_pred CHhHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCH-----HHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcCCCch
Confidence 9999998899999999999999999998 8877766422 222233334444556677889999999999999999
Q ss_pred CCCCHHHHHHHHHHHhhh
Q 014478 231 ERPNAKSLVISLMSLQKE 248 (424)
Q Consensus 231 ~Rps~~~~~~~l~~~~~~ 248 (424)
+|||++++++.|+.+.+.
T Consensus 358 ~Rps~~~i~~~L~~i~~~ 375 (377)
T 3cbl_A 358 QRPSFSTIYQELQSIRKR 375 (377)
T ss_dssp GSCCHHHHHHHHHHHHHH
T ss_pred hCcCHHHHHHHHHHHHhh
Confidence 999999999999988653
|
| >3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-45 Score=345.55 Aligned_cols=243 Identities=15% Similarity=0.204 Sum_probs=198.2
Q ss_pred CCCcccceeeeecceecccccCCCchhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCe----eeEEEecCCCCCHHhHhc
Q 014478 2 GGRCSKFSICWFHCHLKSSVLESSDLGETLNLEEAKAVGNLRSERLANLIGCCYEADE----RLLVAEFMPNETLAKHLF 77 (424)
Q Consensus 2 G~~g~v~~~~~~~~~v~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~----~~lv~e~~~~gsL~~~l~ 77 (424)
|+||.||.+.+.+..|++|++.........+.+|+.++++++||||+++++++..... .++||||+++|+|.+++.
T Consensus 35 G~~g~Vy~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~ 114 (322)
T 3soc_A 35 GRFGCVWKAQLLNEYVAVKIFPIQDKQSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLWLITAFHEKGSLSDFLK 114 (322)
T ss_dssp STTCEEEEEEETTEEEEEEEECGGGHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEEECCTTCBHHHHHH
T ss_pred cCceEEEEEEECCCEEEEEEeecCchHHHHHHHHHHHHhcCCCCCchhhcceeccCCCCCceEEEEEecCCCCCHHHHHH
Confidence 8999999999999999999997776666777889999999999999999999987543 689999999999999996
Q ss_pred cCCCCCCCHHHHHHHHHHHHHHHHHHHhC----------CCcccccCCCCCeeecCCCCeEEccccccccCCCC------
Q 014478 78 HWETQPMKWAMRLRVALYLAQALEYCSSK----------GRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG------ 141 (424)
Q Consensus 78 ~~~~~~l~~~~~~~i~~qi~~~L~~lH~~----------~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~------ 141 (424)
. ..+++..++.++.|++.||.|||+. + |+||||||+|||++.++.+||+|||+++.....
T Consensus 115 ~---~~~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~-ivH~Dlkp~Nill~~~~~~kL~DFg~a~~~~~~~~~~~~ 190 (322)
T 3soc_A 115 A---NVVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPA-ISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDT 190 (322)
T ss_dssp H---CCBCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECE-EECSCCSGGGEEECTTCCEEECCCTTCEEECTTSCCCCC
T ss_pred h---cCCCHHHHHHHHHHHHHHHHHHHhhccccccccCCC-EEeCCCChHhEEECCCCeEEEccCCcccccccccCcccc
Confidence 4 4699999999999999999999999 8 999999999999999999999999999764432
Q ss_pred CccccCccCCCccccccC-----CCCCCcceehhHHHHHHHhhCCCCCCchhhH-------HH----hhhhhhH-hhhcc
Q 014478 142 KSYSTNLAFTPPEYMRTG-----RVTPESVVYSFGTMLLDLLSGKHIPPSHALD-------LI----RSKNFLL-LMDSA 204 (424)
Q Consensus 142 ~~~~gt~~y~aPE~~~~~-----~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~-------~~----~~~~~~~-~~~~~ 204 (424)
....||+.|+|||++.+. .++.++|||||||++|||++|+.||...... .. ....... .....
T Consensus 191 ~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (322)
T 3soc_A 191 HGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEEEIGQHPSLEDMQEVVVHKK 270 (322)
T ss_dssp TTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSCCCCCCCTTHHHHCSSCCHHHHHHHHTTSC
T ss_pred ccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCCCCCCcchhccchhhhhccCCchhhhhhhhhccc
Confidence 235689999999999863 4677899999999999999999887642110 00 0000111 11111
Q ss_pred cCCCCC-----chhHHHHHHHHHHhcccCcCCCCCHHHHHHHHHHHhhh
Q 014478 205 LEGHFS-----NDEGTELVRLASRCLQSEARERPNAKSLVISLMSLQKE 248 (424)
Q Consensus 205 ~~~~~~-----~~~~~~l~~li~~cl~~dp~~Rps~~~~~~~l~~~~~~ 248 (424)
.....+ ...++++.++|.+||+.||++|||+.++++.|+.+.+.
T Consensus 271 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~~~ 319 (322)
T 3soc_A 271 KRPVLRDYWQKHAGMAMLCETIEECWDHDAEARLSAGCVGERITQMQRL 319 (322)
T ss_dssp CCCCCCGGGGSSHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred CCCCccccccccchHHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHH
Confidence 111111 24567799999999999999999999999999998764
|
| >1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-45 Score=363.08 Aligned_cols=240 Identities=18% Similarity=0.293 Sum_probs=209.1
Q ss_pred CCCcccceeeee--cceecccccCCCchhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHhHhccC
Q 014478 2 GGRCSKFSICWF--HCHLKSSVLESSDLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHW 79 (424)
Q Consensus 2 G~~g~v~~~~~~--~~~v~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~ 79 (424)
|+||.||.+.+. +..|++|++.......+.|.+|+++|++++||||++++++|......+|||||+++|+|.+++...
T Consensus 231 G~fg~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~E~~~~g~L~~~l~~~ 310 (495)
T 1opk_A 231 GQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLREC 310 (495)
T ss_dssp GTTSSEEEEEEGGGTEEEEEEECCSSSSCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHHS
T ss_pred CCCeEEEEEEEcCCCeEEEEEEecCcccchHHHHHHHHHHHhcCCCCEeeEEEEEecCCcEEEEEEccCCCCHHHHHHhc
Confidence 899999999995 677899988877767889999999999999999999999999999999999999999999999765
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCCC-----ccccCccCCCcc
Q 014478 80 ETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGK-----SYSTNLAFTPPE 154 (424)
Q Consensus 80 ~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~~-----~~~gt~~y~aPE 154 (424)
....+++..++.++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++...... ...+++.|+|||
T Consensus 311 ~~~~~~~~~~~~i~~qi~~~L~~LH~~~-ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~y~aPE 389 (495)
T 1opk_A 311 NRQEVSAVVLLYMATQISSAMEYLEKKN-FIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPE 389 (495)
T ss_dssp CTTTSCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEECGGGCEEECCTTCEECCTTCCEECCTTCCCCGGGCCHH
T ss_pred CcCCCCHHHHHHHHHHHHHHHHHHHhCC-cccCCCChhhEEECCCCcEEEeecccceeccCCceeecCCCcCCcceeCHh
Confidence 5667999999999999999999999999 9999999999999999999999999998764322 234567899999
Q ss_pred ccccCCCCCCcceehhHHHHHHHhh-CCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHHHHHHHHHhcccCcCCCC
Q 014478 155 YMRTGRVTPESVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERP 233 (424)
Q Consensus 155 ~~~~~~~~~~~Dv~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rp 233 (424)
++.++.++.++|||||||++|||++ |..|++... .......+........+..+++++.+||.+||+.||++||
T Consensus 390 ~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP 464 (495)
T 1opk_A 390 SLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGID-----LSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRP 464 (495)
T ss_dssp HHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCC-----GGGHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSC
T ss_pred HHhcCCCCcHHhHHhHHHHHHHHHhCCCCCCCCCC-----HHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcCcChhHCc
Confidence 9998899999999999999999999 887776532 2223333444455566778899999999999999999999
Q ss_pred CHHHHHHHHHHHhh
Q 014478 234 NAKSLVISLMSLQK 247 (424)
Q Consensus 234 s~~~~~~~l~~~~~ 247 (424)
|+.++++.|+.+..
T Consensus 465 s~~el~~~L~~~~~ 478 (495)
T 1opk_A 465 SFAEIHQAFETMFQ 478 (495)
T ss_dssp CHHHHHHHHHTSCS
T ss_pred CHHHHHHHHHHHHh
Confidence 99999999987754
|
| >3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4e-45 Score=339.10 Aligned_cols=233 Identities=17% Similarity=0.244 Sum_probs=196.0
Q ss_pred CCCcccceeee--ecceecccccCCCc-hhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHhHhcc
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESSD-LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFH 78 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~ 78 (424)
|+||.||.+.+ .+..|++|++.... ...+.+.+|+.+++.++||||+++++++..++..++||||++||+|.+++..
T Consensus 31 G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~ 110 (297)
T 3fxz_A 31 GASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTE 110 (297)
T ss_dssp ETTEEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCTTCBHHHHHHH
T ss_pred CCCeEEEEEEECCCCcEEEEEEeecccccHHHHHHHHHHHHhcCCCCCCCeEeEEEEECCEEEEEEECCCCCCHHHHHhh
Confidence 89999999976 56778888775433 3456788999999999999999999999999999999999999999999964
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCC----CccccCccCCCcc
Q 014478 79 WETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG----KSYSTNLAFTPPE 154 (424)
Q Consensus 79 ~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~----~~~~gt~~y~aPE 154 (424)
..+++.++..++.|++.||.|||+++ |+||||||+|||++.++.+||+|||++...... ....||+.|+|||
T Consensus 111 ---~~~~~~~~~~~~~qi~~~l~~lH~~~-i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE 186 (297)
T 3fxz_A 111 ---TCMDEGQIAAVCRECLQALEFLHSNQ-VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPE 186 (297)
T ss_dssp ---SCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEECTTCCEEECCCTTCEECCSTTCCBCCCCSCGGGCCHH
T ss_pred ---cCCCHHHHHHHHHHHHHHHHHHHhCC-ceeCCCCHHHEEECCCCCEEEeeCCCceecCCcccccCCccCCcCccChh
Confidence 46999999999999999999999999 999999999999999999999999998765533 3456899999999
Q ss_pred ccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHHHHHHHHHhcccCcCCCCC
Q 014478 155 YMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERPN 234 (424)
Q Consensus 155 ~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps 234 (424)
++.+..++.++|||||||++|+|++|..||......... .............+..+++.+.++|.+||+.||++|||
T Consensus 187 ~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps 263 (297)
T 3fxz_A 187 VVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRAL---YLIATNGTPELQNPEKLSAIFRDFLNRCLEMDVEKRGS 263 (297)
T ss_dssp HHHCSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHH---HHHHHHCSCCCSCGGGSCHHHHHHHHHHSCSSTTTSCC
T ss_pred hhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHH---HHHHhCCCCCCCCccccCHHHHHHHHHHccCChhHCcC
Confidence 999999999999999999999999999888654211111 11111122233345677889999999999999999999
Q ss_pred HHHHHHH
Q 014478 235 AKSLVIS 241 (424)
Q Consensus 235 ~~~~~~~ 241 (424)
+++++++
T Consensus 264 ~~ell~h 270 (297)
T 3fxz_A 264 AKELLQH 270 (297)
T ss_dssp HHHHTTC
T ss_pred HHHHhhC
Confidence 9999865
|
| >3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-44 Score=333.05 Aligned_cols=240 Identities=23% Similarity=0.331 Sum_probs=203.0
Q ss_pred CCCcccceeeeec-ceecccccCCCchhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHhHhccCC
Q 014478 2 GGRCSKFSICWFH-CHLKSSVLESSDLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWE 80 (424)
Q Consensus 2 G~~g~v~~~~~~~-~~v~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~ 80 (424)
|+||.||.+.+.+ ..+++|++.......+.+.+|++++++++||||+++++++...+..++||||+++|+|.+++.. .
T Consensus 35 G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-~ 113 (283)
T 3gen_A 35 GQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLRE-M 113 (283)
T ss_dssp --CEEEEEEEETTTEEEEEEEECTTSBCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEECCCTTCBHHHHHHC-G
T ss_pred CCCceEEEEEEcCCCeEEEEEecCCCCCHHHHHHHHHHHhcCCCCCEeeEEEEEecCCCeEEEEeccCCCcHHHHHHH-h
Confidence 8999999998854 4688888877766678899999999999999999999999999999999999999999999964 2
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCC-----CccccCccCCCccc
Q 014478 81 TQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG-----KSYSTNLAFTPPEY 155 (424)
Q Consensus 81 ~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~-----~~~~gt~~y~aPE~ 155 (424)
...+++.+++.++.|++.||.|||+++ ++||||||+||+++.++.+||+|||+++..... ....+|+.|+|||+
T Consensus 114 ~~~~~~~~~~~i~~qi~~~l~~lH~~~-i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~ 192 (283)
T 3gen_A 114 RHRFQTQQLLEMCKDVCEAMEYLESKQ-FLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEV 192 (283)
T ss_dssp GGCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSSCSGGGEEECTTSCEEECSTTGGGGBCCHHHHSTTSTTSCGGGCCHHH
T ss_pred ccCCCHHHHHHHHHHHHHHHHHHHHCC-ccCCCCccceEEEcCCCCEEEccccccccccccccccccCCccCcccCCHHH
Confidence 457999999999999999999999999 999999999999999999999999999865432 23456788999999
Q ss_pred cccCCCCCCcceehhHHHHHHHhh-CCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHHHHHHHHHhcccCcCCCCC
Q 014478 156 MRTGRVTPESVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERPN 234 (424)
Q Consensus 156 ~~~~~~~~~~Dv~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps 234 (424)
+.+..++.++||||||+++|+|++ |..||...... .....+........+..+++.+.+++.+||+.||++|||
T Consensus 193 ~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps 267 (283)
T 3gen_A 193 LMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNS-----ETAEHIAQGLRLYRPHLASEKVYTIMYSCWHEKADERPT 267 (283)
T ss_dssp HHHCCCSHHHHHHHHHHHHHHHHTTTCCTTTTSCHH-----HHHHHHHTTCCCCCCTTCCHHHHHHHHHTTCSSGGGSCC
T ss_pred hccCCCCchhhHHHHHHHHHHHHhCCCCCccccChh-----HHHHHHhcccCCCCCCcCCHHHHHHHHHHccCChhHCcC
Confidence 998889999999999999999998 88777653221 122222233334455667889999999999999999999
Q ss_pred HHHHHHHHHHHhhh
Q 014478 235 AKSLVISLMSLQKE 248 (424)
Q Consensus 235 ~~~~~~~l~~~~~~ 248 (424)
+.+++++|+.+.++
T Consensus 268 ~~~ll~~L~~~~~~ 281 (283)
T 3gen_A 268 FKILLSNILDVMDE 281 (283)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhc
Confidence 99999999988764
|
| >3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A | Back alignment and structure |
|---|
Probab=100.00 E-value=7.4e-45 Score=341.52 Aligned_cols=231 Identities=18% Similarity=0.240 Sum_probs=196.8
Q ss_pred CCCcccceeee--ecceecccccCCCc---hhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHhHh
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESSD---LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHL 76 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~~---~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~l 76 (424)
|+||.||.+.+ .+..|++|++.... ...+.+.+|+++|+.++||||+++++++...+..++||||++||+|.+++
T Consensus 26 G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e~~~~~~L~~~l 105 (328)
T 3fe3_A 26 GNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYL 105 (328)
T ss_dssp CSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCTTCBHHHHH
T ss_pred CCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEEECCCCCcHHHHH
Confidence 89999999987 67788888875432 34567889999999999999999999999999999999999999999999
Q ss_pred ccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCC---CccccCccCCCc
Q 014478 77 FHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG---KSYSTNLAFTPP 153 (424)
Q Consensus 77 ~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~---~~~~gt~~y~aP 153 (424)
.. .+.+++.++..++.|++.||.|||+++ |+||||||+|||++.++.+||+|||+++..... ....||+.|+||
T Consensus 106 ~~--~~~l~~~~~~~~~~qi~~al~~lH~~~-ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~gt~~y~aP 182 (328)
T 3fe3_A 106 VA--HGRMKEKEARSKFRQIVSAVQYCHQKR-IVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDAFCGAPPYAAP 182 (328)
T ss_dssp HH--HCCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEECTTSCEEECSTTCCGGGSSSCGGGTTSSSGGGCCH
T ss_pred HH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-EeccCCCHHHEEEcCCCCEEEeeccCceecCCCCccccccCCcceeCc
Confidence 65 457999999999999999999999999 999999999999999999999999999765433 345789999999
Q ss_pred cccccCCCC-CCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHHHHHHHHHhcccCcCCC
Q 014478 154 EYMRTGRVT-PESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARER 232 (424)
Q Consensus 154 E~~~~~~~~-~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~R 232 (424)
|++.+..++ .++|||||||++|+|++|+.||.......... .+... ....|..+++++.+++.+||..||.+|
T Consensus 183 E~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~----~i~~~--~~~~p~~~s~~~~~li~~~L~~dP~~R 256 (328)
T 3fe3_A 183 ELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRE----RVLRG--KYRIPFYMSTDCENLLKRFLVLNPIKR 256 (328)
T ss_dssp HHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHH----HHHHC--CCCCCTTSCHHHHHHHHHHCCSSTTTS
T ss_pred ccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCCCCHHHHHH----HHHhC--CCCCCCCCCHHHHHHHHHHCCCChhHC
Confidence 999987764 78999999999999999999988753322221 11111 223455678899999999999999999
Q ss_pred CCHHHHHHH
Q 014478 233 PNAKSLVIS 241 (424)
Q Consensus 233 ps~~~~~~~ 241 (424)
||+++++++
T Consensus 257 ~t~~eil~h 265 (328)
T 3fe3_A 257 GTLEQIMKD 265 (328)
T ss_dssp CCHHHHTTC
T ss_pred cCHHHHhcC
Confidence 999999865
|
| >3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.1e-45 Score=332.82 Aligned_cols=240 Identities=18% Similarity=0.271 Sum_probs=202.6
Q ss_pred CCCcccceeeeec-ceecccccCCCchhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHhHhccCC
Q 014478 2 GGRCSKFSICWFH-CHLKSSVLESSDLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWE 80 (424)
Q Consensus 2 G~~g~v~~~~~~~-~~v~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~ 80 (424)
|++|.||.+.+.+ ..+++|++.......+.+.+|++++++++||||+++++++......++||||+++++|.+++.. .
T Consensus 19 G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-~ 97 (268)
T 3sxs_A 19 GQFGVVKLGKWKGQYDVAVKMIKEGSMSEDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTEYISNGCLLNYLRS-H 97 (268)
T ss_dssp ETTEEEEEEEETTTEEEEEEEECBTTBCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEECCTTCBHHHHHHH-H
T ss_pred CCCceEEEEEecCceeEEEEEeccCCCcHHHHHHHHHHHHhCCCCCEeeEEEEEccCCceEEEEEccCCCcHHHHHHH-c
Confidence 8999999998854 4688888877766678899999999999999999999999999999999999999999999965 2
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCCC-----ccccCccCCCccc
Q 014478 81 TQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGK-----SYSTNLAFTPPEY 155 (424)
Q Consensus 81 ~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~~-----~~~gt~~y~aPE~ 155 (424)
+..+++.+++.++.|++.||.|||+++ ++||||||+||+++.++.+||+|||+++...... ...+|+.|+|||.
T Consensus 98 ~~~~~~~~~~~i~~qi~~~l~~lH~~~-i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~ 176 (268)
T 3sxs_A 98 GKGLEPSQLLEMCYDVCEGMAFLESHQ-FIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSSVGTKFPVKWSAPEV 176 (268)
T ss_dssp GGGCCHHHHHHHHHHHHHHHHHHHHTT-EEESSCSGGGEEECTTCCEEECCTTCEEECCTTCEEECCSCCCCGGGCCHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCcCcceEEECCCCCEEEccCccceecchhhhhcccCCCcCcccCCHHH
Confidence 456999999999999999999999999 9999999999999999999999999998665432 2345678999999
Q ss_pred cccCCCCCCcceehhHHHHHHHhh-CCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHHHHHHHHHhcccCcCCCCC
Q 014478 156 MRTGRVTPESVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERPN 234 (424)
Q Consensus 156 ~~~~~~~~~~Dv~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps 234 (424)
+.+..++.++||||||+++|+|++ |..||...... ..............+...++++.+++.+||+.||++|||
T Consensus 177 ~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps 251 (268)
T 3sxs_A 177 FHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNS-----EVVLKVSQGHRLYRPHLASDTIYQIMYSCWHELPEKRPT 251 (268)
T ss_dssp HHHSEEETTHHHHHHHHHHHHHHTTTCCTTTTSCHH-----HHHHHHHTTCCCCCCTTSCHHHHHHHHHTTCSSGGGSCC
T ss_pred HhccCCchhhhhHHHHHHHHHHHcCCCCCccccChH-----HHHHHHHcCCCCCCCCcChHHHHHHHHHHcCCChhhCcC
Confidence 998889999999999999999999 88777653221 111122222333445566889999999999999999999
Q ss_pred HHHHHHHHHHHhhh
Q 014478 235 AKSLVISLMSLQKE 248 (424)
Q Consensus 235 ~~~~~~~l~~~~~~ 248 (424)
+.+++++|+.+.+.
T Consensus 252 ~~~ll~~L~~l~~~ 265 (268)
T 3sxs_A 252 FQQLLSSIEPLREK 265 (268)
T ss_dssp HHHHHHHHGGGCC-
T ss_pred HHHHHHHHHHhhhc
Confidence 99999999887654
|
| >2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-44 Score=337.63 Aligned_cols=246 Identities=23% Similarity=0.378 Sum_probs=204.3
Q ss_pred CCCcccceeee-ecceecccccCCCc-hhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHhHhccC
Q 014478 2 GGRCSKFSICW-FHCHLKSSVLESSD-LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHW 79 (424)
Q Consensus 2 G~~g~v~~~~~-~~~~v~~~~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~ 79 (424)
|+||.||.+.+ .+..|++|++.... ...+.+.+|+++++.++||||+++++++...+..++||||+++|+|.+++...
T Consensus 50 G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~ 129 (321)
T 2qkw_B 50 GVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGS 129 (321)
T ss_dssp CSSSEEEEEECTTCCEEEEEECCSCCSSHHHHHHHHHHGGGSCCCTTBCCEEEECCCTTCCEEEEECCTTCBTGGGSSSS
T ss_pred CCCeeEEEEEECCCCEEEEEEecccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEEEEcCCCCcHHHHHhcc
Confidence 89999999987 36778888775443 34678999999999999999999999999999999999999999999999653
Q ss_pred C--CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCC------CccccCccCC
Q 014478 80 E--TQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG------KSYSTNLAFT 151 (424)
Q Consensus 80 ~--~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~------~~~~gt~~y~ 151 (424)
. ...+++.+++.++.|++.||.|||+++ ++||||||+||+++.++.+||+|||+++..... ....||+.|+
T Consensus 130 ~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~-ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~ 208 (321)
T 2qkw_B 130 DLPTMSMSWEQRLEICIGAARGLHYLHTRA-IIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLSTVVKGTLGYI 208 (321)
T ss_dssp CCCSCCCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCCSTTEEECTTCCEEECCCTTCEECSSSSCCCCBCCCEEETTTC
T ss_pred CCCccccCHHHHHHHHHHHHHHHHHhcCCC-eecCCCCHHHEEECCCCCEEEeecccccccccccccccccccCCCcccc
Confidence 2 235899999999999999999999999 999999999999999999999999998764322 2335799999
Q ss_pred CccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHH-----------HhhhhhhHhhhcccCCCCCchhHHHHHHH
Q 014478 152 PPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDL-----------IRSKNFLLLMDSALEGHFSNDEGTELVRL 220 (424)
Q Consensus 152 aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 220 (424)
|||++.+..++.++|||||||++|||++|+.||....... ..........++......+..++..+.++
T Consensus 209 aPE~~~~~~~~~~~Di~slG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 288 (321)
T 2qkw_B 209 DPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQLEQIVDPNLADKIRPESLRKFGDT 288 (321)
T ss_dssp CHHHHHHCBCCTHHHHHHHHHHHHHHHHCCTTCSCSSSSSCCCHHHHTHHHHTTTCCCSSSSSSCTTCSCHHHHHHHHHH
T ss_pred CHHHhcCCCCCcccchHhHHHHHHHHHhCCCcccccCcHHHHHHHHHhhhccccccHHHhcChhhccccCHHHHHHHHHH
Confidence 9999998899999999999999999999998876431110 01111122223333445567788999999
Q ss_pred HHHhcccCcCCCCCHHHHHHHHHHHhhh
Q 014478 221 ASRCLQSEARERPNAKSLVISLMSLQKE 248 (424)
Q Consensus 221 i~~cl~~dp~~Rps~~~~~~~l~~~~~~ 248 (424)
+.+||+.||++|||+.+++++|+.+.+.
T Consensus 289 i~~~l~~dP~~Rps~~ell~~L~~~l~~ 316 (321)
T 2qkw_B 289 AVKCLALSSEDRPSMGDVLWKLEYALRL 316 (321)
T ss_dssp HHHHTCSSGGGSCCHHHHHHHHHHHHHS
T ss_pred HHHHcCCCcccCcCHHHHHHHHHHHhhc
Confidence 9999999999999999999999988764
|
| >1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B | Back alignment and structure |
|---|
Probab=100.00 E-value=5.6e-45 Score=357.78 Aligned_cols=240 Identities=19% Similarity=0.301 Sum_probs=205.0
Q ss_pred CCCcccceeeee-cceecccccCCCchhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHhHhccCC
Q 014478 2 GGRCSKFSICWF-HCHLKSSVLESSDLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWE 80 (424)
Q Consensus 2 G~~g~v~~~~~~-~~~v~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~ 80 (424)
|+||.||.+.+. +..|++|++.......+.|.+|+++|++++||||+++++++. .+..++||||+++|+|.+++....
T Consensus 199 G~fg~V~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~-~~~~~lv~e~~~~g~L~~~l~~~~ 277 (454)
T 1qcf_A 199 GQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVKLHAVVT-KEPIYIITEFMAKGSLLDFLKSDE 277 (454)
T ss_dssp CSSEEEEEEEETTTEEEEEEEECTTSBCHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEECCCTTCBHHHHHHSHH
T ss_pred CCceEEEEEEECCccEEEEEEecCCCccHHHHHHHHHHHhhCCCCCEeeEEEEEe-CCccEEEEeecCCCcHHHHHHhcc
Confidence 899999999984 567888888877667889999999999999999999999987 567899999999999999997533
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCC-----CccccCccCCCccc
Q 014478 81 TQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG-----KSYSTNLAFTPPEY 155 (424)
Q Consensus 81 ~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~-----~~~~gt~~y~aPE~ 155 (424)
...+++..++.++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++..... ....+|+.|+|||+
T Consensus 278 ~~~~~~~~~~~~~~qi~~~l~~LH~~~-ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~y~aPE~ 356 (454)
T 1qcf_A 278 GSKQPLPKLIDFSAQIAEGMAFIEQRN-YIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEA 356 (454)
T ss_dssp HHTCCHHHHHHHHHHHHHHHHHHHHTT-CCCSSCSGGGEEECTTCCEEECSTTGGGGBCCHHHHTTCSSSSCGGGSCHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHhCC-ccCCCCCHHHEEECCCCcEEEeeCCCceEcCCCceeccCCCcccccccCHHH
Confidence 347899999999999999999999999 999999999999999999999999999876432 23346788999999
Q ss_pred cccCCCCCCcceehhHHHHHHHhh-CCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHHHHHHHHHhcccCcCCCCC
Q 014478 156 MRTGRVTPESVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERPN 234 (424)
Q Consensus 156 ~~~~~~~~~~Dv~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps 234 (424)
+..+.++.++|||||||++|||++ |..||+..... .....+........+..+++++.++|.+||..||++|||
T Consensus 357 ~~~~~~~~~~DvwslG~~l~el~t~g~~P~~~~~~~-----~~~~~i~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPt 431 (454)
T 1qcf_A 357 INFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNP-----EVIRALERGYRMPRPENCPEELYNIMMRCWKNRPEERPT 431 (454)
T ss_dssp HHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHH-----HHHHHHHHTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCC
T ss_pred hccCCCCcHHHHHhHHHHHHHHHhCCCCCCCCCCHH-----HHHHHHHcCCCCCCCCCCCHHHHHHHHHHccCChhHCcC
Confidence 998899999999999999999999 88888764221 222223333444566778899999999999999999999
Q ss_pred HHHHHHHHHHHhhh
Q 014478 235 AKSLVISLMSLQKE 248 (424)
Q Consensus 235 ~~~~~~~l~~~~~~ 248 (424)
+++|+..|+.+...
T Consensus 432 ~~~i~~~L~~~~~~ 445 (454)
T 1qcf_A 432 FEYIQSVLDDFYTA 445 (454)
T ss_dssp HHHHHHHHHTSSSS
T ss_pred HHHHHHHHHHHHhc
Confidence 99999999887643
|
| >3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.4e-45 Score=346.86 Aligned_cols=243 Identities=19% Similarity=0.272 Sum_probs=201.9
Q ss_pred CCCcccceeeeec-------ceecccccCCC--chhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCH
Q 014478 2 GGRCSKFSICWFH-------CHLKSSVLESS--DLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETL 72 (424)
Q Consensus 2 G~~g~v~~~~~~~-------~~v~~~~~~~~--~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL 72 (424)
|+||.||.+.+.+ ..|++|++... ......+.+|+.++++++||||+++++++......++||||++||+|
T Consensus 82 G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~~~~g~L 161 (367)
T 3l9p_A 82 GAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDL 161 (367)
T ss_dssp CSSSCEEEEEECC-----CCEEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCTTEEH
T ss_pred CCCEEEEEEEEccCCCCCcceeEEEEecccccChhhHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCCEEEEEeCCCCCH
Confidence 8999999998643 35788887543 34456788999999999999999999999999999999999999999
Q ss_pred HhHhccCC-----CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCC---CeEEccccccccCC-----
Q 014478 73 AKHLFHWE-----TQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDG---NPRLSSFGLMKNSR----- 139 (424)
Q Consensus 73 ~~~l~~~~-----~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~---~~kl~Dfg~~~~~~----- 139 (424)
.+++.... ...+++.+++.++.||+.||.|||+++ |+||||||+|||++.++ .+||+|||+++...
T Consensus 162 ~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~-ivHrDlkp~NIll~~~~~~~~~kL~DFG~a~~~~~~~~~ 240 (367)
T 3l9p_A 162 KSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH-FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYY 240 (367)
T ss_dssp HHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEESCSSTTCCEEECCCHHHHHHHHHSSC
T ss_pred HHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHhCC-eeCCCCChhhEEEecCCCCceEEECCCcccccccccccc
Confidence 99996422 245899999999999999999999999 99999999999998555 59999999987432
Q ss_pred -CCCccccCccCCCccccccCCCCCCcceehhHHHHHHHhh-CCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHHH
Q 014478 140 -DGKSYSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTEL 217 (424)
Q Consensus 140 -~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 217 (424)
......+|+.|+|||++.+..++.++|||||||++|||++ |..||..... ......+........+..++.++
T Consensus 241 ~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~pf~~~~~-----~~~~~~i~~~~~~~~~~~~~~~l 315 (367)
T 3l9p_A 241 RKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSN-----QEVLEFVTSGGRMDPPKNCPGPV 315 (367)
T ss_dssp TTCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCH-----HHHHHHHHTTCCCCCCTTCCHHH
T ss_pred ccCCCcCCcccEECHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCH-----HHHHHHHHcCCCCCCCccCCHHH
Confidence 2234567899999999998899999999999999999998 8877766422 22223333333445566778899
Q ss_pred HHHHHHhcccCcCCCCCHHHHHHHHHHHhhhhh
Q 014478 218 VRLASRCLQSEARERPNAKSLVISLMSLQKEAE 250 (424)
Q Consensus 218 ~~li~~cl~~dp~~Rps~~~~~~~l~~~~~~~~ 250 (424)
.+|+.+||+.||++|||+.+++++|+.+.....
T Consensus 316 ~~li~~~l~~dP~~Rps~~eil~~l~~~~~~~~ 348 (367)
T 3l9p_A 316 YRIMTQCWQHQPEDRPNFAIILERIEYCTQDPD 348 (367)
T ss_dssp HHHHHHHTCSSGGGSCCHHHHHHHHHHHHHCHH
T ss_pred HHHHHHHcCCCHhHCcCHHHHHHHHHHHhhChh
Confidence 999999999999999999999999999877543
|
| >3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-44 Score=344.96 Aligned_cols=243 Identities=19% Similarity=0.285 Sum_probs=204.8
Q ss_pred CCCcccceeeeec---------ceecccccCCCc--hhhhHHHHHHHHHhcC-CCcCcceeEEEEEeCCeeeEEEecCCC
Q 014478 2 GGRCSKFSICWFH---------CHLKSSVLESSD--LGETLNLEEAKAVGNL-RSERLANLIGCCYEADERLLVAEFMPN 69 (424)
Q Consensus 2 G~~g~v~~~~~~~---------~~v~~~~~~~~~--~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~~~~ 69 (424)
||||.||.+.+.+ ..+++|++.... .....+.+|+++++++ +||||++++++|..++..++||||+++
T Consensus 80 G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~~~~~lv~e~~~~ 159 (382)
T 3tt0_A 80 GAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASK 159 (382)
T ss_dssp CSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCTT
T ss_pred CCCeEEEEEEEccccccccccceEEEEEeeccccCHHHHHHHHHHHHHHHHhcCCchhhhheeeeccCCceEEEEEecCC
Confidence 8999999998743 357777775443 3457889999999999 999999999999999999999999999
Q ss_pred CCHHhHhccCC--------------CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEcccccc
Q 014478 70 ETLAKHLFHWE--------------TQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLM 135 (424)
Q Consensus 70 gsL~~~l~~~~--------------~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~ 135 (424)
|+|.+++.... ...+++.+++.++.||+.||.|||+++ |+||||||+|||++.++.+||+|||++
T Consensus 160 g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~-ivH~Dlkp~NIll~~~~~~kL~DFG~a 238 (382)
T 3tt0_A 160 GNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKK-CIHRDLAARNVLVTEDNVMKIADFGLA 238 (382)
T ss_dssp CBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEECTTCCEEECSCSCC
T ss_pred CcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCC-EecCCCCcceEEEcCCCcEEEcccCcc
Confidence 99999997532 245999999999999999999999999 999999999999999999999999999
Q ss_pred ccCCCC------CccccCccCCCccccccCCCCCCcceehhHHHHHHHhh-CCCCCCchhhHHHhhhhhhHhhhcccCCC
Q 014478 136 KNSRDG------KSYSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKNFLLLMDSALEGH 208 (424)
Q Consensus 136 ~~~~~~------~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (424)
+..... ....+|+.|+|||++.+..++.++|||||||++|+|++ |..||...... .....+.......
T Consensus 239 ~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~ellt~g~~p~~~~~~~-----~~~~~~~~~~~~~ 313 (382)
T 3tt0_A 239 RDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVE-----ELFKLLKEGHRMD 313 (382)
T ss_dssp CCSSCCCTTCCCTTCCCGGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHH-----HHHHHHHTTCCCC
T ss_pred cccccccccccccCCCCCcceeCHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCHH-----HHHHHHHcCCCCC
Confidence 865432 23356788999999998889999999999999999999 88887764222 2223333344445
Q ss_pred CCchhHHHHHHHHHHhcccCcCCCCCHHHHHHHHHHHhhhhh
Q 014478 209 FSNDEGTELVRLASRCLQSEARERPNAKSLVISLMSLQKEAE 250 (424)
Q Consensus 209 ~~~~~~~~l~~li~~cl~~dp~~Rps~~~~~~~l~~~~~~~~ 250 (424)
.+..+++++.+++.+||+.||++|||+.+++++|+.+.....
T Consensus 314 ~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~~~ 355 (382)
T 3tt0_A 314 KPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVALTS 355 (382)
T ss_dssp CCSSCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHSC
T ss_pred CCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHHh
Confidence 567788999999999999999999999999999999886543
|
| >3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-44 Score=333.07 Aligned_cols=242 Identities=19% Similarity=0.301 Sum_probs=209.8
Q ss_pred CCCcccceeeee--cceecccccCCCchhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHhHhccC
Q 014478 2 GGRCSKFSICWF--HCHLKSSVLESSDLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHW 79 (424)
Q Consensus 2 G~~g~v~~~~~~--~~~v~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~ 79 (424)
|++|.||.+.+. +..+++|++..+....+.+.+|++++++++||||+++++++...+..++||||++|++|.+++...
T Consensus 24 G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~ 103 (288)
T 3kfa_A 24 GQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLREC 103 (288)
T ss_dssp GTTCSEEEEEEGGGTEEEEEEEECSCSTHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEECCTTEEHHHHHHHC
T ss_pred CCceeEEEeEecCCCEEEEEEecCcCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCEEEEEEcCCCCcHHHHHHhc
Confidence 899999999984 667888888877777888999999999999999999999999999999999999999999999765
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCCC-----ccccCccCCCcc
Q 014478 80 ETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGK-----SYSTNLAFTPPE 154 (424)
Q Consensus 80 ~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~~-----~~~gt~~y~aPE 154 (424)
....+++..++.++.|++.||.|||+++ ++||||||+||+++.++.+||+|||++....... ...+|+.|+|||
T Consensus 104 ~~~~~~~~~~~~i~~~i~~~l~~lH~~~-i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE 182 (288)
T 3kfa_A 104 NRQEVSAVVLLYMATQISSAMEYLEKKN-FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPE 182 (288)
T ss_dssp CTTTSCHHHHHHHHHHHHHHHHHHHHHT-CCCSCCSGGGEEECGGGCEEECCCCGGGTSCSSSSEEETTEEECGGGCCHH
T ss_pred ccCCccHhHHHHHHHHHHHHHHHHHHCC-ccCCCCCcceEEEcCCCCEEEccCccceeccCCccccccCCccccCcCChh
Confidence 5677999999999999999999999999 9999999999999999999999999998765432 234578899999
Q ss_pred ccccCCCCCCcceehhHHHHHHHhh-CCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHHHHHHHHHhcccCcCCCC
Q 014478 155 YMRTGRVTPESVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERP 233 (424)
Q Consensus 155 ~~~~~~~~~~~Dv~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rp 233 (424)
.+.+..++.++||||||+++|+|++ |..||.... .......+........+..+++++.+++.+||..||.+||
T Consensus 183 ~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rp 257 (288)
T 3kfa_A 183 SLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGID-----LSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRP 257 (288)
T ss_dssp HHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCC-----GGGHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSC
T ss_pred hhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCC-----HHHHHHHHhccCCCCCCCCCCHHHHHHHHHHhCCChhhCc
Confidence 9998899999999999999999999 887776532 2222333333444556677889999999999999999999
Q ss_pred CHHHHHHHHHHHhhhh
Q 014478 234 NAKSLVISLMSLQKEA 249 (424)
Q Consensus 234 s~~~~~~~l~~~~~~~ 249 (424)
|+.++++.|+.+..+.
T Consensus 258 s~~~~~~~l~~~~~~~ 273 (288)
T 3kfa_A 258 SFAEIHQAFETMFQES 273 (288)
T ss_dssp CHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhc
Confidence 9999999999887754
|
| >3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-44 Score=334.40 Aligned_cols=245 Identities=18% Similarity=0.288 Sum_probs=200.5
Q ss_pred CCCcccceeee------ecceecccccCCCc-hhhhHHHHHHHHHhcCCCcCcceeEEEEEeC--CeeeEEEecCCCCCH
Q 014478 2 GGRCSKFSICW------FHCHLKSSVLESSD-LGETLNLEEAKAVGNLRSERLANLIGCCYEA--DERLLVAEFMPNETL 72 (424)
Q Consensus 2 G~~g~v~~~~~------~~~~v~~~~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~--~~~~lv~e~~~~gsL 72 (424)
|+||.||.+.+ .+..|++|++.... ...+.+.+|++++++++||||+++++++... ...++||||+++|+|
T Consensus 21 G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~L 100 (295)
T 3ugc_A 21 GNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSL 100 (295)
T ss_dssp CSSEEEEEEEECTTCSSCCEEEEEEEESCCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECHHHHTSCEEEEECCTTCBH
T ss_pred cCCEEEEEEEEecccCCCCcEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCceEEEEEeCCCCCH
Confidence 89999999985 56778888876544 3457889999999999999999999999653 458999999999999
Q ss_pred HhHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCC-------Cccc
Q 014478 73 AKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG-------KSYS 145 (424)
Q Consensus 73 ~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~-------~~~~ 145 (424)
.+++.. ....+++.+++.++.|++.||.|||+++ ++||||||+|||++.++.+||+|||+++..... ....
T Consensus 101 ~~~l~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~~-ivH~Dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~ 178 (295)
T 3ugc_A 101 RDYLQK-HKERIDHIKLLQYTSQICKGMEYLGTKR-YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGE 178 (295)
T ss_dssp HHHHHH-CGGGCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEEEETTEEEECCCCSCC-------------CTT
T ss_pred HHHHHh-cccccCHHHHHHHHHHHHHHHHHHhcCC-cccCCCCHhhEEEcCCCeEEEccCcccccccCCcceeeeccCCC
Confidence 999965 2446999999999999999999999999 999999999999999999999999999865432 2234
Q ss_pred cCccCCCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHh-----------hhhhhHhhhcccCCCCCchhH
Q 014478 146 TNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIR-----------SKNFLLLMDSALEGHFSNDEG 214 (424)
Q Consensus 146 gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~ 214 (424)
+|..|+|||.+.+..++.++||||||+++|+|++|..|+......... ................+..++
T Consensus 179 ~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (295)
T 3ugc_A 179 SPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCP 258 (295)
T ss_dssp CGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTTCTTCSHHHHHHHHHCTTCCTHHHHHHHHHHHHTTCCCCCCTTCC
T ss_pred CccceeCcHHhcCCCCChHHHHHHHHHHHHHHHhcccccCCChHHHHhhhcCccccchhHHHHHHHHhccCcCCCCcCcC
Confidence 677899999999889999999999999999999999777654222111 011222333344445677788
Q ss_pred HHHHHHHHHhcccCcCCCCCHHHHHHHHHHHhhh
Q 014478 215 TELVRLASRCLQSEARERPNAKSLVISLMSLQKE 248 (424)
Q Consensus 215 ~~l~~li~~cl~~dp~~Rps~~~~~~~l~~~~~~ 248 (424)
+++.+++.+||+.||++|||+.++++.|+.+.+.
T Consensus 259 ~~l~~li~~~l~~dp~~Rps~~el~~~L~~l~~~ 292 (295)
T 3ugc_A 259 DEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDN 292 (295)
T ss_dssp HHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHHh
Confidence 9999999999999999999999999999998765
|
| >1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-44 Score=339.64 Aligned_cols=236 Identities=15% Similarity=0.166 Sum_probs=198.1
Q ss_pred CCCcccceeee--ecceecccccCCCchhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHhHhccC
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESSDLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHW 79 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~ 79 (424)
|+||.||.+.+ .+..+++|++.........+.+|+.+++.++||||+++++++.+.+..++||||++||+|.+++..
T Consensus 16 G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~- 94 (321)
T 1tki_A 16 GEFGIVHRCVETSSKKTYMAKFVKVKGTDQVLVKKEISILNIARHRNILHLHESFESMEELVMIFEFISGLDIFERINT- 94 (321)
T ss_dssp CSSEEEEEEEETTTTEEEEEEEECCCTHHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEECCCCCCBHHHHHTS-
T ss_pred CCCeEEEEEEECCCCcEEEEEEEecCcccHHHHHHHHHHHHhCCCCCCCeEeEEEecCCEEEEEEEeCCCCCHHHHHHh-
Confidence 89999999988 466788888776666677889999999999999999999999999999999999999999999964
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecC--CCCeEEccccccccCCCCC---ccccCccCCCcc
Q 014478 80 ETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDK--DGNPRLSSFGLMKNSRDGK---SYSTNLAFTPPE 154 (424)
Q Consensus 80 ~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~--~~~~kl~Dfg~~~~~~~~~---~~~gt~~y~aPE 154 (424)
....+++.+++.++.|++.||.|||+++ |+||||||+|||++. ++.+||+|||+++...... ...||+.|+|||
T Consensus 95 ~~~~~~~~~~~~i~~qi~~al~~lH~~g-ivH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE 173 (321)
T 1tki_A 95 SAFELNEREIVSYVHQVCEALQFLHSHN-IGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNFRLLFTAPEYYAPE 173 (321)
T ss_dssp SSCCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEESSSSCCCEEECCCTTCEECCTTCEEEEEESCGGGSCHH
T ss_pred cCCCCCHHHHHHHHHHHHHHHHHHHHCC-CCcCCCCHHHEEEccCCCCCEEEEECCCCeECCCCCccccccCChhhcCcH
Confidence 3457999999999999999999999999 999999999999987 7899999999998765443 346899999999
Q ss_pred ccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhcccCCC--CCchhHHHHHHHHHHhcccCcCCC
Q 014478 155 YMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGH--FSNDEGTELVRLASRCLQSEARER 232 (424)
Q Consensus 155 ~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~li~~cl~~dp~~R 232 (424)
++.+..++.++|||||||++|+|++|..||........ ...+........ ....+++++.++|.+||..||.+|
T Consensus 174 ~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~----~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R 249 (321)
T 1tki_A 174 VHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQI----IENIMNAEYTFDEEAFKEISIEAMDFVDRLLVKERKSR 249 (321)
T ss_dssp HHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSHHHH----HHHHHHTCCCCCHHHHTTSCHHHHHHHHTTSCSSGGGS
T ss_pred HhcCCCCCchhhHHHHHHHHHHHHhCCCCCcCCCHHHH----HHHHHcCCCCCChhhhccCCHHHHHHHHHHcCCChhHC
Confidence 99988899999999999999999999988876432211 111111111100 112457889999999999999999
Q ss_pred CCHHHHHHHHH
Q 014478 233 PNAKSLVISLM 243 (424)
Q Consensus 233 ps~~~~~~~l~ 243 (424)
||+.+++++-.
T Consensus 250 pt~~e~l~hp~ 260 (321)
T 1tki_A 250 MTASEALQHPW 260 (321)
T ss_dssp CCHHHHHHSHH
T ss_pred cCHHHHhcChh
Confidence 99999998643
|
| >3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-44 Score=340.89 Aligned_cols=240 Identities=17% Similarity=0.265 Sum_probs=196.3
Q ss_pred CCCcccceeeeec--ce----ecccccCCC--chhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHH
Q 014478 2 GGRCSKFSICWFH--CH----LKSSVLESS--DLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLA 73 (424)
Q Consensus 2 G~~g~v~~~~~~~--~~----v~~~~~~~~--~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~ 73 (424)
|+||.||++.+.. .. +++|++... ......+.+|+.++++++||||+++++++.. +..++||||+++|+|.
T Consensus 24 G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~~v~e~~~~~~L~ 102 (325)
T 3kex_A 24 GVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCPG-SSLQLVTQYLPLGSLL 102 (325)
T ss_dssp CSSCEEEEEEECCTTCSCCEEEEEEEECCTTSCSCBCSCCHHHHHHHTCCCTTBCCEEEEECB-SSEEEEEECCTTCBSH
T ss_pred cCCceEEEEEEcCCCceEEEEEEEEeccccccHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcC-CccEEEEEeCCCCCHH
Confidence 8999999998843 32 444554322 2334677889999999999999999999874 5688999999999999
Q ss_pred hHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCC------CccccC
Q 014478 74 KHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG------KSYSTN 147 (424)
Q Consensus 74 ~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~------~~~~gt 147 (424)
+++.. ....+++..++.++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++..... ....+|
T Consensus 103 ~~l~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~~-ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~ 180 (325)
T 3kex_A 103 DHVRQ-HRGALGPQLLLNWGVQIAKGMYYLEEHG-MVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTP 180 (325)
T ss_dssp HHHHS-SGGGSCTTHHHHHHHHHHHHHHHHHHTT-CCCSCCSSTTEEESSSSCEEECSCSGGGGSCCCTTCCC-----CC
T ss_pred HHHHH-ccccCCHHHHHHHHHHHHHHHHHHHhCC-CCCCccchheEEECCCCeEEECCCCcccccCcccccccccCCCCc
Confidence 99965 3457899999999999999999999999 999999999999999999999999999876433 233567
Q ss_pred ccCCCccccccCCCCCCcceehhHHHHHHHhh-CCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHHHHHHHHHhcc
Q 014478 148 LAFTPPEYMRTGRVTPESVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQ 226 (424)
Q Consensus 148 ~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~ 226 (424)
..|+|||++.++.++.++|||||||++|+|++ |..||.... .......+........+..++.++.+++.+||.
T Consensus 181 ~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~ 255 (325)
T 3kex_A 181 IKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLR-----LAEVPDLLEKGERLAQPQICTIDVYMVMVKCWM 255 (325)
T ss_dssp TTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSC-----TTHHHHHHHTTCBCCCCTTBCTTTTHHHHHHTC
T ss_pred ccccChHHhccCCCChhhHhHHhHHHHHHHHhCCCCCccccC-----HHHHHHHHHcCCCCCCCCcCcHHHHHHHHHHcC
Confidence 89999999998899999999999999999999 998877532 122223333333445566678889999999999
Q ss_pred cCcCCCCCHHHHHHHHHHHhhhh
Q 014478 227 SEARERPNAKSLVISLMSLQKEA 249 (424)
Q Consensus 227 ~dp~~Rps~~~~~~~l~~~~~~~ 249 (424)
.||.+|||+.+++++|+.+....
T Consensus 256 ~dp~~Rps~~el~~~l~~~~~~~ 278 (325)
T 3kex_A 256 IDENIRPTFKELANEFTRMARDP 278 (325)
T ss_dssp SCTTTSCCHHHHHHHHHHHTTSH
T ss_pred CChhhCcCHHHHHHHHHHHHhcc
Confidence 99999999999999999987653
|
| >1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-44 Score=341.27 Aligned_cols=242 Identities=20% Similarity=0.253 Sum_probs=201.4
Q ss_pred CCCcccceeeeec-------ceecccccCCCc--hhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCH
Q 014478 2 GGRCSKFSICWFH-------CHLKSSVLESSD--LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETL 72 (424)
Q Consensus 2 G~~g~v~~~~~~~-------~~v~~~~~~~~~--~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL 72 (424)
|+||.||.+.+.+ ..|++|++.... ...+.+.+|+.++++++||||+++++++..++..++||||+++|+|
T Consensus 58 G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L 137 (343)
T 1luf_A 58 GAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVGKPMCLLFEYMAYGDL 137 (343)
T ss_dssp CSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEEECCTTCBH
T ss_pred cCCeeEEEEEecCcCCCCCceeEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEccCCceEEEEecCCCCcH
Confidence 8999999999864 667888876433 3457889999999999999999999999999999999999999999
Q ss_pred HhHhccCC----------------------CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEc
Q 014478 73 AKHLFHWE----------------------TQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLS 130 (424)
Q Consensus 73 ~~~l~~~~----------------------~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~ 130 (424)
.+++.... ...+++.+++.++.||+.||.|||+++ |+||||||+|||++.++.+||+
T Consensus 138 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~-ivH~Dlkp~NIl~~~~~~~kl~ 216 (343)
T 1luf_A 138 NEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERK-FVHRDLATRNCLVGENMVVKIA 216 (343)
T ss_dssp HHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEECGGGCEEEC
T ss_pred HHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCCcceEEECCCCeEEEe
Confidence 99996532 257999999999999999999999999 9999999999999999999999
Q ss_pred cccccccCCC------CCccccCccCCCccccccCCCCCCcceehhHHHHHHHhh-CCCCCCchhhHHHhhhhhhHhhhc
Q 014478 131 SFGLMKNSRD------GKSYSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKNFLLLMDS 203 (424)
Q Consensus 131 Dfg~~~~~~~------~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~ 203 (424)
|||+++.... .....+|+.|+|||++.+..++.++|||||||++|+|++ |..||....... ....+..
T Consensus 217 Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~-----~~~~~~~ 291 (343)
T 1luf_A 217 DFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMAHEE-----VIYYVRD 291 (343)
T ss_dssp CCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHH-----HHHHHHT
T ss_pred ecCCCcccccCccccccCCCcccceecChhhhccCCcCcccccHHHHHHHHHHHhcCCCcCCCCChHH-----HHHHHhC
Confidence 9999875432 233457889999999998899999999999999999999 887876542221 1122222
Q ss_pred ccCCCCCchhHHHHHHHHHHhcccCcCCCCCHHHHHHHHHHHhhhh
Q 014478 204 ALEGHFSNDEGTELVRLASRCLQSEARERPNAKSLVISLMSLQKEA 249 (424)
Q Consensus 204 ~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~~~~~l~~~~~~~ 249 (424)
......+..+++++.+++.+||+.||++|||+.++++.|+.+....
T Consensus 292 ~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~~~~~L~~~~~~~ 337 (343)
T 1luf_A 292 GNILACPENCPLELYNLMRLCWSKLPADRPSFCSIHRILQRMCERA 337 (343)
T ss_dssp TCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC--
T ss_pred CCcCCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHHHHHHhhh
Confidence 2233456677889999999999999999999999999999887653
|
| >2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-44 Score=334.34 Aligned_cols=242 Identities=17% Similarity=0.252 Sum_probs=194.8
Q ss_pred CCCcccceeeeecceecccccCCCchhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHhHhccCCC
Q 014478 2 GGRCSKFSICWFHCHLKSSVLESSDLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWET 81 (424)
Q Consensus 2 G~~g~v~~~~~~~~~v~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~ 81 (424)
|+||.||.+.+.+..+++|++... ...+.|.+|++++++++||||+++++++.+ ..++||||+++|+|.+++.....
T Consensus 19 G~~g~V~~~~~~~~~vavK~~~~~-~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~--~~~lv~e~~~~~~L~~~l~~~~~ 95 (307)
T 2eva_A 19 GAFGVVCKAKWRAKDVAIKQIESE-SERKAFIVELRQLSRVNHPNIVKLYGACLN--PVCLVMEYAEGGSLYNVLHGAEP 95 (307)
T ss_dssp CSSSEEEEEEETTEEEEEEECSST-THHHHHHHHHHHHHHCCCTTBCCEEEBCTT--TTEEEEECCTTCBHHHHHHCSSS
T ss_pred CCCceEEEEEECCeeEEEEEecCh-hHHHHHHHHHHHHhcCCCCCcCeEEEEEcC--CcEEEEEcCCCCCHHHHHhccCC
Confidence 899999999999888999888654 346789999999999999999999998873 47999999999999999975322
Q ss_pred -CCCCHHHHHHHHHHHHHHHHHHHh---CCCcccccCCCCCeeecCCCC-eEEccccccccCCCC-CccccCccCCCccc
Q 014478 82 -QPMKWAMRLRVALYLAQALEYCSS---KGRALYHDLNAYRILFDKDGN-PRLSSFGLMKNSRDG-KSYSTNLAFTPPEY 155 (424)
Q Consensus 82 -~~l~~~~~~~i~~qi~~~L~~lH~---~~~ivH~dikp~Nill~~~~~-~kl~Dfg~~~~~~~~-~~~~gt~~y~aPE~ 155 (424)
..++...++.++.|++.||.|||+ ++ |+||||||+|||++.++. +||+|||++...... ....||+.|+|||+
T Consensus 96 ~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~-ivH~dlkp~NIll~~~~~~~kl~Dfg~~~~~~~~~~~~~gt~~y~aPE~ 174 (307)
T 2eva_A 96 LPYYTAAHAMSWCLQCSQGVAYLHSMQPKA-LIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHMTNNKGSAAWMAPEV 174 (307)
T ss_dssp EECCCHHHHHHHHHHHHHHHHHHHTCSSSC-CCCCCCSGGGEEEETTTTEEEECCCCC------------CCTTSSCHHH
T ss_pred CCccCHHHHHHHHHHHHHHHHHHHhCCCCC-eecCCCChhHEEEeCCCCEEEEcccccccccccccccCCCCCceEChhh
Confidence 247899999999999999999999 78 999999999999998887 799999998765433 34568999999999
Q ss_pred cccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHHHHHHHHHhcccCcCCCCCH
Q 014478 156 MRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERPNA 235 (424)
Q Consensus 156 ~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~ 235 (424)
+.+..++.++||||||+++|+|++|+.||........ ..............+..++..+.+++.+||+.||++|||+
T Consensus 175 ~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~ 251 (307)
T 2eva_A 175 FEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAF---RIMWAVHNGTRPPLIKNLPKPIESLMTRCWSKDPSQRPSM 251 (307)
T ss_dssp HTCCCCCTHHHHHHHHHHHHHHHHTCCTTTTTCSSHH---HHHHHHHTTCCCCCBTTCCHHHHHHHHHHTCSSGGGSCCH
T ss_pred hCCCCCCcHHHHHHHHHHHHHHHHCCCCchhhCccHH---HHHHHHhcCCCCCcccccCHHHHHHHHHHhcCChhhCcCH
Confidence 9988999999999999999999999988764311111 1111122223334455678899999999999999999999
Q ss_pred HHHHHHHHHHhhhhh
Q 014478 236 KSLVISLMSLQKEAE 250 (424)
Q Consensus 236 ~~~~~~l~~~~~~~~ 250 (424)
+++++.|..+.+...
T Consensus 252 ~ell~~L~~~~~~~~ 266 (307)
T 2eva_A 252 EEIVKIMTHLMRYFP 266 (307)
T ss_dssp HHHHHHHHHHGGGCC
T ss_pred HHHHHHHHHHHHhcc
Confidence 999999999876543
|
| >3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-44 Score=338.15 Aligned_cols=239 Identities=16% Similarity=0.272 Sum_probs=195.8
Q ss_pred CCCcccceeeee--cce----ecccccCC--CchhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHH
Q 014478 2 GGRCSKFSICWF--HCH----LKSSVLES--SDLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLA 73 (424)
Q Consensus 2 G~~g~v~~~~~~--~~~----v~~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~ 73 (424)
||||.||++.+. +.. +++|.+.. .....+.|.+|+.++++++||||++++++|..+. .++||||+++|+|.
T Consensus 26 G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-~~~v~e~~~~g~L~ 104 (327)
T 3poz_A 26 GAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQLITQLMPFGCLL 104 (327)
T ss_dssp ETTEEEEEEEECC----CCEEEEEEEC-------CHHHHHHHHHHHHHCCBTTBCCEEEEEESSS-EEEEEECCTTCBHH
T ss_pred CCCeEEEEEEEcCCCceEEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCC-eEEEEEecCCCcHH
Confidence 899999999873 333 35555432 2244678999999999999999999999998754 78999999999999
Q ss_pred hHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCCC------ccccC
Q 014478 74 KHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGK------SYSTN 147 (424)
Q Consensus 74 ~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~~------~~~gt 147 (424)
+++.. ....+++..++.++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++...... ...+|
T Consensus 105 ~~l~~-~~~~~~~~~~~~~~~qi~~~l~~LH~~~-ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~t 182 (327)
T 3poz_A 105 DYVRE-HKDNIGSQYLLNWCVQIAKGMNYLEDRR-LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 182 (327)
T ss_dssp HHHHH-STTSCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEEEETTEEEECCTTHHHHHTTTCC-------CCC
T ss_pred HHHHh-cCCCCCHHHHHHHHHHHHHHHHHHhhCC-eeCCCCChheEEECCCCCEEEccCcceeEccCCcccccccCCCcc
Confidence 99975 3567999999999999999999999999 9999999999999999999999999997654321 23457
Q ss_pred ccCCCccccccCCCCCCcceehhHHHHHHHhh-CCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHHHHHHHHHhcc
Q 014478 148 LAFTPPEYMRTGRVTPESVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQ 226 (424)
Q Consensus 148 ~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~ 226 (424)
+.|+|||++.+..++.++|||||||++|||++ |..||.... .......+........+..++.++.+++.+||+
T Consensus 183 ~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~ 257 (327)
T 3poz_A 183 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIP-----ASEISSILEKGERLPQPPICTIDVYMIMVKCWM 257 (327)
T ss_dssp GGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCC-----GGGHHHHHHTTCCCCCCTTBCHHHHHHHHHHTC
T ss_pred ccccChHHhccCCCCchhhhhhhHHHHHHHHhcCCCCccCCC-----HHHHHHHHHcCCCCCCCccCCHHHHHHHHHHcC
Confidence 89999999999999999999999999999999 888876532 222333333444445666788899999999999
Q ss_pred cCcCCCCCHHHHHHHHHHHhhh
Q 014478 227 SEARERPNAKSLVISLMSLQKE 248 (424)
Q Consensus 227 ~dp~~Rps~~~~~~~l~~~~~~ 248 (424)
.||.+|||+.+++++|+.+.+.
T Consensus 258 ~~p~~Rps~~ell~~l~~~~~~ 279 (327)
T 3poz_A 258 IDADSRPKFRELIIEFSKMARD 279 (327)
T ss_dssp SCGGGSCCHHHHHHHHHHHHTS
T ss_pred CChhhCCCHHHHHHHHHHHHhh
Confidence 9999999999999999988765
|
| >3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-44 Score=329.40 Aligned_cols=237 Identities=19% Similarity=0.266 Sum_probs=190.8
Q ss_pred CCCcccceeeeecceecccccCCCch-----hhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHhHh
Q 014478 2 GGRCSKFSICWFHCHLKSSVLESSDL-----GETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHL 76 (424)
Q Consensus 2 G~~g~v~~~~~~~~~v~~~~~~~~~~-----~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~l 76 (424)
|++|.||.+.+.+..+++|++..... ..+.+.+|+++++.++||||+++++++..++..++||||+++++|.+++
T Consensus 18 G~~g~V~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~ 97 (271)
T 3dtc_A 18 GGFGKVYRAFWIGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCLVMEFARGGPLNRVL 97 (271)
T ss_dssp ETTEEEEEEEETTEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC--CEEEEECCTTEEHHHHH
T ss_pred CCCeEEEEEEEcCCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCceEEEEEcCCCCCHHHHh
Confidence 89999999999988899888754432 2467889999999999999999999999999999999999999999999
Q ss_pred ccCCCCCCCHHHHHHHHHHHHHHHHHHHhCC--CcccccCCCCCeeecC--------CCCeEEccccccccCCCC--Ccc
Q 014478 77 FHWETQPMKWAMRLRVALYLAQALEYCSSKG--RALYHDLNAYRILFDK--------DGNPRLSSFGLMKNSRDG--KSY 144 (424)
Q Consensus 77 ~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~--~ivH~dikp~Nill~~--------~~~~kl~Dfg~~~~~~~~--~~~ 144 (424)
. ...+++..++.++.|++.||.|||+++ +++||||||+||+++. ++.+||+|||+++..... ...
T Consensus 98 ~---~~~~~~~~~~~i~~~l~~~l~~lH~~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~ 174 (271)
T 3dtc_A 98 S---GKRIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHRTTKMSA 174 (271)
T ss_dssp T---SSCCCHHHHHHHHHHHHHHHHHHHHSSSSCCCCSCCSGGGEEESSCCSSSCCSSCCEEECCCCC------------
T ss_pred h---cCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCchHHEEEecccccccccCcceEEccCCcccccccccccCC
Confidence 4 467999999999999999999999987 3779999999999986 678999999999865433 345
Q ss_pred ccCccCCCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHHHHHHHHHh
Q 014478 145 STNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRC 224 (424)
Q Consensus 145 ~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c 224 (424)
.||+.|+|||.+.+..++.++||||||+++|+|++|+.||....... ..............+..+++++.+++.+|
T Consensus 175 ~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~li~~~ 250 (271)
T 3dtc_A 175 AGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLA----VAYGVAMNKLALPIPSTCPEPFAKLMEDC 250 (271)
T ss_dssp -CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHHCCCTTTTSCHHH----HHHHHHTSCCCCCCCTTCCHHHHHHHHHH
T ss_pred CCccceeCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH----HHHhhhcCCCCCCCCcccCHHHHHHHHHH
Confidence 78999999999998889999999999999999999998887642211 11122223334455667788999999999
Q ss_pred cccCcCCCCCHHHHHHHHHHH
Q 014478 225 LQSEARERPNAKSLVISLMSL 245 (424)
Q Consensus 225 l~~dp~~Rps~~~~~~~l~~~ 245 (424)
|+.||.+|||+.+++++|+.+
T Consensus 251 l~~~p~~Rps~~e~l~~L~~l 271 (271)
T 3dtc_A 251 WNPDPHSRPSFTNILDQLTTI 271 (271)
T ss_dssp TCSSGGGSCCHHHHHHHHHC-
T ss_pred hcCCcccCcCHHHHHHHHhcC
Confidence 999999999999999998753
|
| >3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-44 Score=328.30 Aligned_cols=241 Identities=16% Similarity=0.200 Sum_probs=202.6
Q ss_pred CCCcccceeeeecceecccccCCCc---hhhhHHHHHHHHHhcCCCcCcceeEEEEEeC--CeeeEEEecCCCCCHHhHh
Q 014478 2 GGRCSKFSICWFHCHLKSSVLESSD---LGETLNLEEAKAVGNLRSERLANLIGCCYEA--DERLLVAEFMPNETLAKHL 76 (424)
Q Consensus 2 G~~g~v~~~~~~~~~v~~~~~~~~~---~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~--~~~~lv~e~~~~gsL~~~l 76 (424)
|++|.||.+.+.+..+++|++.... ...+.|.+|+.++++++||||+++++++... ...++||||+++|+|.+++
T Consensus 21 G~~g~V~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l 100 (271)
T 3kmu_A 21 NHSGELWKGRWQGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLITHWMPYGSLYNVL 100 (271)
T ss_dssp ETTEEEEEEEETTEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTSSSCEEEEECCTTCBHHHHH
T ss_pred CCcceEEEEEECCeeEEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhheEEEEccCCCCCeEeeecccCCCcHHHHH
Confidence 8999999999998889988886543 3456799999999999999999999999887 6789999999999999999
Q ss_pred ccCCCCCCCHHHHHHHHHHHHHHHHHHHhCC-CcccccCCCCCeeecCCCCeEEccccccccCCCCCccccCccCCCccc
Q 014478 77 FHWETQPMKWAMRLRVALYLAQALEYCSSKG-RALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLAFTPPEY 155 (424)
Q Consensus 77 ~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~-~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~gt~~y~aPE~ 155 (424)
.......+++.+++.++.|++.||.|||+++ +++||||||+||+++.++.++|+|||+..... .....||+.|+|||.
T Consensus 101 ~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~~i~H~dikp~Nil~~~~~~~~l~~~~~~~~~~-~~~~~~t~~y~aPE~ 179 (271)
T 3kmu_A 101 HEGTNFVVDQSQAVKFALDMARGMAFLHTLEPLIPRHALNSRSVMIDEDMTARISMADVKFSFQ-SPGRMYAPAWVAPEA 179 (271)
T ss_dssp HSCSSCCCCHHHHHHHHHHHHHHHHHHTTSSSCCTTCCCSGGGEEECTTSCEEEEGGGSCCTTS-CTTCBSCGGGSCHHH
T ss_pred hhcccCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCccceEEEcCCcceeEEeccceeeec-ccCccCCccccChhh
Confidence 7654457999999999999999999999975 39999999999999999999999998866533 334578999999999
Q ss_pred cccCCCCC---CcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHHHHHHHHHhcccCcCCC
Q 014478 156 MRTGRVTP---ESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARER 232 (424)
Q Consensus 156 ~~~~~~~~---~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~R 232 (424)
+.+...+. ++|||||||++|+|++|+.||....... ..............+..+++++.+++.+||+.||++|
T Consensus 180 ~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R 255 (271)
T 3kmu_A 180 LQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSNME----IGMKVALEGLRPTIPPGISPHVSKLMKICMNEDPAKR 255 (271)
T ss_dssp HHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTSCHHH----HHHHHHHSCCCCCCCTTCCHHHHHHHHHHTCSSGGGS
T ss_pred hccCCCCCCCchhhHHHHHHHHHHHHhCCCCccccChHH----HHHHHHhcCCCCCCCCCCCHHHHHHHHHHcCCChhhC
Confidence 98765544 7999999999999999998887542221 1222333344455667788999999999999999999
Q ss_pred CCHHHHHHHHHHHhh
Q 014478 233 PNAKSLVISLMSLQK 247 (424)
Q Consensus 233 ps~~~~~~~l~~~~~ 247 (424)
||++++++.|+.+.+
T Consensus 256 ps~~~il~~L~~l~~ 270 (271)
T 3kmu_A 256 PKFDMIVPILEKMQD 270 (271)
T ss_dssp CCHHHHHHHHHHHCC
T ss_pred cCHHHHHHHHHHhhc
Confidence 999999999988753
|
| >1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-44 Score=355.26 Aligned_cols=240 Identities=23% Similarity=0.301 Sum_probs=200.7
Q ss_pred CCCcccceeeeec-ceecccccCCCchhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHhHhccCC
Q 014478 2 GGRCSKFSICWFH-CHLKSSVLESSDLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWE 80 (424)
Q Consensus 2 G~~g~v~~~~~~~-~~v~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~ 80 (424)
|+||.||.+.+.+ ..|++|++.......+.|.+|+++|++++||||+++++++.. +..++||||+++|+|.+++....
T Consensus 195 G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~~iv~e~~~~gsL~~~l~~~~ 273 (452)
T 1fmk_A 195 GCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLKGET 273 (452)
T ss_dssp CSSCEEEEEEETTTEEEEEEECCTTSSCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEECCCTTCBHHHHHSHHH
T ss_pred CCCeEEEEEEECCCceEEEEEeccCCCCHHHHHHHHHHHHhCCCCCEeeEEEEEcC-CceEEEehhhcCCCHHHHHHhcC
Confidence 8999999999954 568888887766667889999999999999999999999876 66899999999999999996533
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCC-----CccccCccCCCccc
Q 014478 81 TQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG-----KSYSTNLAFTPPEY 155 (424)
Q Consensus 81 ~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~-----~~~~gt~~y~aPE~ 155 (424)
+..+++.+++.++.||+.||.|||+++ ++||||||+|||++.++.+||+|||+++..... ....+|+.|+|||+
T Consensus 274 ~~~~~~~~~~~i~~qi~~~l~~LH~~~-ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~y~aPE~ 352 (452)
T 1fmk_A 274 GKYLRLPQLVDMAAQIASGMAYVERMN-YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEA 352 (452)
T ss_dssp HTTCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEECGGGCEEECCCCTTC--------------CCGGGSCHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHhCC-eeCCCCChhhEEECCCCCEEECCCccceecCCCceecccCCcccccccCHhH
Confidence 456999999999999999999999999 999999999999999999999999999865432 22346788999999
Q ss_pred cccCCCCCCcceehhHHHHHHHhh-CCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHHHHHHHHHhcccCcCCCCC
Q 014478 156 MRTGRVTPESVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERPN 234 (424)
Q Consensus 156 ~~~~~~~~~~Dv~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps 234 (424)
+.++.++.++|||||||++|||++ |..||+..... .....+........+..+++.+.++|.+||+.||++|||
T Consensus 353 ~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~-----~~~~~i~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt 427 (452)
T 1fmk_A 353 ALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNR-----EVLDQVERGYRMPCPPECPESLHDLMCQCWRKEPEERPT 427 (452)
T ss_dssp HHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHH-----HHHHHHHTTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCC
T ss_pred HhcCCCCccccHHhHHHHHHHHHhCCCCCCCCCCHH-----HHHHHHHcCCCCCCCCCCCHHHHHHHHHHccCChhhCcC
Confidence 998899999999999999999999 88787654221 122223333445566778899999999999999999999
Q ss_pred HHHHHHHHHHHhhh
Q 014478 235 AKSLVISLMSLQKE 248 (424)
Q Consensus 235 ~~~~~~~l~~~~~~ 248 (424)
++++++.|+.+...
T Consensus 428 ~~~l~~~L~~~~~~ 441 (452)
T 1fmk_A 428 FEYLQAFLEDYFTS 441 (452)
T ss_dssp HHHHHHHHHTTTSC
T ss_pred HHHHHHHHHHHhcc
Confidence 99999999887654
|
| >3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-44 Score=342.81 Aligned_cols=242 Identities=20% Similarity=0.290 Sum_probs=200.4
Q ss_pred CCCcccceeeeec-------ceecccccCCCc--hhhhHHHHHHHHHhcC-CCcCcceeEEEEEeCCe-eeEEEecCCCC
Q 014478 2 GGRCSKFSICWFH-------CHLKSSVLESSD--LGETLNLEEAKAVGNL-RSERLANLIGCCYEADE-RLLVAEFMPNE 70 (424)
Q Consensus 2 G~~g~v~~~~~~~-------~~v~~~~~~~~~--~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~-~~lv~e~~~~g 70 (424)
|+||.||.+.+.+ ..|++|++.... ...+.+.+|++++.++ +||||+++++++...+. .++||||+++|
T Consensus 33 G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~~iv~e~~~~g 112 (359)
T 3vhe_A 33 GAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFG 112 (359)
T ss_dssp CSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTSCCEEEEECCTTE
T ss_pred CCCceEEEEEeccccccccceEEEEEEecCcCCHHHHHHHHHHHHHHHhhcCCcceeeeeeeeecCCCceEEEEEecCCC
Confidence 8999999998643 568888876533 3356799999999999 79999999999987654 88999999999
Q ss_pred CHHhHhccCCC----------------------------------------------------------------CCCCH
Q 014478 71 TLAKHLFHWET----------------------------------------------------------------QPMKW 86 (424)
Q Consensus 71 sL~~~l~~~~~----------------------------------------------------------------~~l~~ 86 (424)
+|.+++..... ..+++
T Consensus 113 ~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 192 (359)
T 3vhe_A 113 NLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEEAPEDLYKDFLTL 192 (359)
T ss_dssp EHHHHHHTTTTSBCSCC------------------------------------------------------CTTTTCBCH
T ss_pred cHHHHHHhccccccccccccchhhcccccccccchhhhccccccCccccccccccccccccchhhhcccccchhccccCH
Confidence 99999965321 12899
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCC------CccccCccCCCccccccCC
Q 014478 87 AMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG------KSYSTNLAFTPPEYMRTGR 160 (424)
Q Consensus 87 ~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~------~~~~gt~~y~aPE~~~~~~ 160 (424)
..++.++.|++.||.|||+++ |+||||||+|||++.++.+||+|||+++..... ....||+.|+|||++.+..
T Consensus 193 ~~~~~~~~ql~~aL~~LH~~~-ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~ 271 (359)
T 3vhe_A 193 EHLICYSFQVAKGMEFLASRK-CIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRV 271 (359)
T ss_dssp HHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEECGGGCEEECCCGGGSCTTSCTTCEEC--CEECGGGCCHHHHHHCC
T ss_pred HHHHHHHHHHHHHHHHHHHCC-cccCCCChhhEEEcCCCcEEEEeccceeeecccccchhccccCCCceeEChhhhcCCC
Confidence 999999999999999999999 999999999999999999999999999865432 2345788999999999889
Q ss_pred CCCCcceehhHHHHHHHhh-CCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHHHHHHHHHhcccCcCCCCCHHHHH
Q 014478 161 VTPESVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERPNAKSLV 239 (424)
Q Consensus 161 ~~~~~Dv~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~~~ 239 (424)
++.++|||||||++|||++ |..||...... ......+........+..+++++.+++.+||+.||++|||+.+++
T Consensus 272 ~~~~~Di~slG~il~ellt~g~~p~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell 347 (359)
T 3vhe_A 272 YTIQSDVWSFGVLLWEIFSLGASPYPGVKID----EEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELV 347 (359)
T ss_dssp CCHHHHHHHHHHHHHHHTTTSCCSSTTCCCS----HHHHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHH
T ss_pred CCchhhhhhHHHHHHHHHhcCCCCCCccchh----HHHHHHHHcCCCCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHH
Confidence 9999999999999999998 98887654211 122223333344455667788999999999999999999999999
Q ss_pred HHHHHHhhh
Q 014478 240 ISLMSLQKE 248 (424)
Q Consensus 240 ~~l~~~~~~ 248 (424)
++|+.+...
T Consensus 348 ~~L~~~~~~ 356 (359)
T 3vhe_A 348 EHLGNLLQA 356 (359)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 999998764
|
| >4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-44 Score=332.75 Aligned_cols=243 Identities=15% Similarity=0.194 Sum_probs=196.1
Q ss_pred CCCcccceeee--ecceecccccCC----CchhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHhH
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLES----SDLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKH 75 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~----~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~ 75 (424)
|++|.||.+.+ .+..+++|++.. .....+.+.+|+.++++++||||+++++++..++..++||||++||+|.++
T Consensus 22 G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~g~~L~~~ 101 (294)
T 4eqm_A 22 GGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLVMEYIEGPTLSEY 101 (294)
T ss_dssp ETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEECSSEEEEEEECCCSCBHHHH
T ss_pred CCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeeeeCCeEEEEEeCCCCCCHHHH
Confidence 89999999986 566788887632 223456889999999999999999999999999999999999999999999
Q ss_pred hccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCC-----CccccCccC
Q 014478 76 LFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG-----KSYSTNLAF 150 (424)
Q Consensus 76 l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~-----~~~~gt~~y 150 (424)
+.. ..++++.+++.++.|++.||.|||+++ ++||||||+||+++.++.+||+|||+++..... ....||+.|
T Consensus 102 l~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~-i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~gt~~y 178 (294)
T 4eqm_A 102 IES--HGPLSVDTAINFTNQILDGIKHAHDMR-IVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQTNHVLGTVQY 178 (294)
T ss_dssp HHH--HCSCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEECTTSCEEECCCSSSTTC-------------CCSS
T ss_pred HHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCCHHHEEECCCCCEEEEeCCCccccccccccccCccccCccc
Confidence 965 457999999999999999999999999 999999999999999999999999999865432 234689999
Q ss_pred CCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHHHHHHHHHhcccCcC
Q 014478 151 TPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEAR 230 (424)
Q Consensus 151 ~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~ 230 (424)
+|||++.+..++.++||||||+++|+|++|+.||................. +......+..+++.+.++|.+||+.||+
T Consensus 179 ~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~li~~~l~~dp~ 257 (294)
T 4eqm_A 179 FSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETAVSIAIKHIQDSV-PNVTTDVRKDIPQSLSNVILRATEKDKA 257 (294)
T ss_dssp CCHHHHHTCCCCTTHHHHHHHHHHHHHHHSSCSSCSSCHHHHHHHHHSSCC-CCHHHHSCTTSCHHHHHHHHHHSCSSGG
T ss_pred cCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhhccC-CCcchhcccCCCHHHHHHHHHHhcCCHh
Confidence 999999988899999999999999999999998876532221111111000 0111123345678999999999999999
Q ss_pred CCC-CHHHHHHHHHHHhhh
Q 014478 231 ERP-NAKSLVISLMSLQKE 248 (424)
Q Consensus 231 ~Rp-s~~~~~~~l~~~~~~ 248 (424)
+|| +++++.+.|..+..+
T Consensus 258 ~R~~~~~~l~~~l~~~~~~ 276 (294)
T 4eqm_A 258 NRYKTIQEMKDDLSSVLHE 276 (294)
T ss_dssp GSCSSHHHHHHHHHTSSSS
T ss_pred HccccHHHHHHHHHHHHhh
Confidence 998 899999888876654
|
| >2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-44 Score=341.18 Aligned_cols=233 Identities=15% Similarity=0.143 Sum_probs=194.0
Q ss_pred CCCcccceeee--ecceecccccCCCch-------hhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCH
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESSDL-------GETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETL 72 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~~~-------~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL 72 (424)
|+||.||.+.. .+..+++|++..... ..+.+.+|+.+|+.++||||+++++++.+....++||||++||+|
T Consensus 23 G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lv~e~~~gg~L 102 (361)
T 2yab_A 23 GQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRTDVVLILELVSGGEL 102 (361)
T ss_dssp ETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCCSCBH
T ss_pred CcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEeCCEEEEEEEcCCCCcH
Confidence 89999999987 467788887754332 246789999999999999999999999999999999999999999
Q ss_pred HhHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCC----CeEEccccccccCCCC---Cccc
Q 014478 73 AKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDG----NPRLSSFGLMKNSRDG---KSYS 145 (424)
Q Consensus 73 ~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~----~~kl~Dfg~~~~~~~~---~~~~ 145 (424)
.+++.. ...+++..+..++.||+.||.|||+++ |+||||||+|||++.++ .+||+|||+++..... ....
T Consensus 103 ~~~l~~--~~~l~~~~~~~i~~qi~~aL~~LH~~g-ivHrDlkp~NIll~~~~~~~~~vkl~DFG~a~~~~~~~~~~~~~ 179 (361)
T 2yab_A 103 FDFLAQ--KESLSEEEATSFIKQILDGVNYLHTKK-IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIF 179 (361)
T ss_dssp HHHHTT--CSCCBHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEESCTTSSSCCEEECCCSSCEECCTTCCCCCCC
T ss_pred HHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCCHHHEEEeCCCCCccCEEEEecCCceEcCCCCccccCC
Confidence 999964 567999999999999999999999999 99999999999998776 7999999999876543 3457
Q ss_pred cCccCCCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhccc--CCCCCchhHHHHHHHHHH
Q 014478 146 TNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSAL--EGHFSNDEGTELVRLASR 223 (424)
Q Consensus 146 gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~li~~ 223 (424)
||+.|+|||++.+..++.++|||||||++|+|++|..||......... ..+..... .......+++++.+||.+
T Consensus 180 gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~Pf~~~~~~~~~----~~i~~~~~~~~~~~~~~~s~~~~~li~~ 255 (361)
T 2yab_A 180 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETL----ANITAVSYDFDEEFFSQTSELAKDFIRK 255 (361)
T ss_dssp SCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHH----HHHHTTCCCCCHHHHTTSCHHHHHHHHH
T ss_pred CCccEECchHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHHHH----HHHHhcCCCCCchhccCCCHHHHHHHHH
Confidence 999999999999889999999999999999999999988764222111 11111111 111113457789999999
Q ss_pred hcccCcCCCCCHHHHHHH
Q 014478 224 CLQSEARERPNAKSLVIS 241 (424)
Q Consensus 224 cl~~dp~~Rps~~~~~~~ 241 (424)
||..||.+|||+.+++++
T Consensus 256 ~L~~dP~~R~t~~e~l~h 273 (361)
T 2yab_A 256 LLVKETRKRLTIQEALRH 273 (361)
T ss_dssp HSCSSTTTSCCHHHHHTS
T ss_pred HCCCChhHCcCHHHHhcC
Confidence 999999999999999865
|
| >1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.2e-44 Score=329.02 Aligned_cols=239 Identities=19% Similarity=0.243 Sum_probs=189.3
Q ss_pred CCCcccceeeeec-----ceecccccCCC--chhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHh
Q 014478 2 GGRCSKFSICWFH-----CHLKSSVLESS--DLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAK 74 (424)
Q Consensus 2 G~~g~v~~~~~~~-----~~v~~~~~~~~--~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~ 74 (424)
|+||.||.+.+.. ..+++|++... ....+.+.+|+.++++++||||+++++++. ++..++||||+++|+|.+
T Consensus 26 G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~lv~e~~~~~~L~~ 104 (281)
T 1mp8_A 26 GQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVWIIMELCTLGELRS 104 (281)
T ss_dssp CSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC-SSSCEEEEECCTTEEHHH
T ss_pred cCCeeEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCccceEEEEEc-cCccEEEEecCCCCCHHH
Confidence 8999999998743 34666766543 334678899999999999999999999985 456899999999999999
Q ss_pred HhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCCC-----ccccCcc
Q 014478 75 HLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGK-----SYSTNLA 149 (424)
Q Consensus 75 ~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~~-----~~~gt~~ 149 (424)
++.. ....+++..++.++.|++.||.|||+++ ++||||||+|||++.++.+||+|||+++...... ...+|+.
T Consensus 105 ~l~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~~-i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~ 182 (281)
T 1mp8_A 105 FLQV-RKYSLDLASLILYAYQLSTALAYLESKR-FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIK 182 (281)
T ss_dssp HHHH-TTTTSCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEEEETTEEEECC-------------------CCGG
T ss_pred HHHh-cCCCCCHHHHHHHHHHHHHHHHHHHhCC-eecccccHHHEEECCCCCEEECccccccccCcccccccccCCCccc
Confidence 9965 3457999999999999999999999999 9999999999999999999999999998665332 2345788
Q ss_pred CCCccccccCCCCCCcceehhHHHHHHHhh-CCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHHHHHHHHHhcccC
Q 014478 150 FTPPEYMRTGRVTPESVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSE 228 (424)
Q Consensus 150 y~aPE~~~~~~~~~~~Dv~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~d 228 (424)
|+|||++.+..++.++|||||||++|||++ |..||..... ......+........+..+++++.+++.+||+.|
T Consensus 183 y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~pf~~~~~-----~~~~~~i~~~~~~~~~~~~~~~l~~li~~~l~~~ 257 (281)
T 1mp8_A 183 WMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKN-----NDVIGRIENGERLPMPPNCPPTLYSLMTKCWAYD 257 (281)
T ss_dssp GCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCG-----GGHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSS
T ss_pred ccChhhcccCCCCCccCchHHHHHHHHHHhcCCCCCCcCCH-----HHHHHHHHcCCCCCCCCCCCHHHHHHHHHHccCC
Confidence 999999998889999999999999999997 8877765321 1112222222334456678899999999999999
Q ss_pred cCCCCCHHHHHHHHHHHhhh
Q 014478 229 ARERPNAKSLVISLMSLQKE 248 (424)
Q Consensus 229 p~~Rps~~~~~~~l~~~~~~ 248 (424)
|++|||+.++++.|+.+.++
T Consensus 258 p~~Rps~~~l~~~l~~~~~~ 277 (281)
T 1mp8_A 258 PSRRPRFTELKAQLSTILEE 277 (281)
T ss_dssp GGGSCCHHHHHHHHHHHHHH
T ss_pred hhhCcCHHHHHHHHHHHHHH
Confidence 99999999999999998765
|
| >1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=8.2e-44 Score=335.40 Aligned_cols=231 Identities=18% Similarity=0.232 Sum_probs=196.4
Q ss_pred CCCcccceeee--ecceecccccCCCc----hhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHhH
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESSD----LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKH 75 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~~----~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~ 75 (424)
|+||.||.+.. .+..+++|++.... .....+.+|+++|+.++||||+++++++...+..++||||++||+|..+
T Consensus 16 G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~E~~~gg~L~~~ 95 (337)
T 1o6l_A 16 GTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFH 95 (337)
T ss_dssp CSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEEEECCTTCBHHHH
T ss_pred CCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeCCEEEEEEeCCCCCcHHHH
Confidence 89999999987 46778888875432 2356788999999999999999999999999999999999999999999
Q ss_pred hccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCC----CCccccCccCC
Q 014478 76 LFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRD----GKSYSTNLAFT 151 (424)
Q Consensus 76 l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~----~~~~~gt~~y~ 151 (424)
+.. ...+++..+..++.||+.||.|||+++ |+||||||+|||++.+|.+||+|||+++.... .....||+.|+
T Consensus 96 l~~--~~~~~~~~~~~~~~qi~~aL~~LH~~~-ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~~~~~~~~gt~~y~ 172 (337)
T 1o6l_A 96 LSR--ERVFTEERARFYGAEIVSALEYLHSRD-VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYL 172 (337)
T ss_dssp HHH--HSCCCHHHHHHHHHHHHHHHHHHHHTT-CBCCCCCGGGEEECTTSCEEECCCTTCBCSCCTTCCBCCCEECGGGC
T ss_pred HHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC-eecCcCCHHHEEECCCCCEEEeeccchhhcccCCCcccccccChhhC
Confidence 864 457999999999999999999999999 99999999999999999999999999986432 23457899999
Q ss_pred CccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHHHHHHHHHhcccCcCC
Q 014478 152 PPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARE 231 (424)
Q Consensus 152 aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~ 231 (424)
|||++.+..++.++|||||||++|||++|..||......... ..+... ...+|..+++++.++|.+||+.||++
T Consensus 173 aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~----~~i~~~--~~~~p~~~s~~~~~li~~lL~~dP~~ 246 (337)
T 1o6l_A 173 APEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLF----ELILME--EIRFPRTLSPEAKSLLAGLLKKDPKQ 246 (337)
T ss_dssp CGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHH----HHHHHC--CCCCCTTSCHHHHHHHHHHTCSSTTT
T ss_pred ChhhhcCCCCCchhhcccchhHHHHHhcCCCCCCCCCHHHHH----HHHHcC--CCCCCCCCCHHHHHHHHHHhhcCHHH
Confidence 999999889999999999999999999999888764322211 111111 22356677889999999999999999
Q ss_pred CC-----CHHHHHHH
Q 014478 232 RP-----NAKSLVIS 241 (424)
Q Consensus 232 Rp-----s~~~~~~~ 241 (424)
|| +++++++|
T Consensus 247 R~g~~~~~~~ei~~h 261 (337)
T 1o6l_A 247 RLGGGPSDAKEVMEH 261 (337)
T ss_dssp STTCSTTTHHHHHTS
T ss_pred hcCCCCCCHHHHHcC
Confidence 99 89999876
|
| >1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=9.7e-44 Score=335.22 Aligned_cols=241 Identities=19% Similarity=0.254 Sum_probs=196.6
Q ss_pred CCCcccceeeeecc------eecccccCCC--chhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHH
Q 014478 2 GGRCSKFSICWFHC------HLKSSVLESS--DLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLA 73 (424)
Q Consensus 2 G~~g~v~~~~~~~~------~v~~~~~~~~--~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~ 73 (424)
|++|.||++.+... .|++|++... ......+.+|++++++++||||+++++++...+..++||||+++|+|.
T Consensus 55 G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~ 134 (333)
T 1mqb_A 55 GEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMIITEYMENGALD 134 (333)
T ss_dssp CSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEECCTTEEHH
T ss_pred CCCeEEEEEEEecCCCCccccEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCCcEEEEeCCCCCcHH
Confidence 89999999987533 3777777543 334567899999999999999999999999999999999999999999
Q ss_pred hHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCCC-------cccc
Q 014478 74 KHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGK-------SYST 146 (424)
Q Consensus 74 ~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~~-------~~~g 146 (424)
+++.. ....+++.+++.++.||+.||.|||+++ ++||||||+||+++.++.+||+|||+++...... ...+
T Consensus 135 ~~l~~-~~~~~~~~~~~~i~~qi~~aL~~LH~~~-ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~ 212 (333)
T 1mqb_A 135 KFLRE-KDGEFSVLQLVGMLRGIAAGMKYLANMN-YVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKI 212 (333)
T ss_dssp HHHHH-TTTCSCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEECTTCCEEECCCCC-----------------CC
T ss_pred HHHHh-CCCCCCHHHHHHHHHHHHHHHHHHHhCC-eeCCCCChheEEECCCCcEEECCCCcchhhccccccccccCCCCc
Confidence 99965 3467999999999999999999999999 9999999999999999999999999998654321 1235
Q ss_pred CccCCCccccccCCCCCCcceehhHHHHHHHhh-CCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHHHHHHHHHhc
Q 014478 147 NLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCL 225 (424)
Q Consensus 147 t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl 225 (424)
|+.|+|||++.+..++.++|||||||++|||++ |..||...... .....+........+..++.++.+++.+||
T Consensus 213 ~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~-----~~~~~~~~~~~~~~~~~~~~~l~~li~~~l 287 (333)
T 1mqb_A 213 PIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNH-----EVMKAINDGFRLPTPMDCPSAIYQLMMQCW 287 (333)
T ss_dssp CGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHH-----HHHHHHHTTCCCCCCTTCBHHHHHHHHHHT
T ss_pred cccccCchhcccCCCCchhhhHHHHHHHHHHHcCCCCCcccCCHH-----HHHHHHHCCCcCCCcccCCHHHHHHHHHHc
Confidence 778999999998889999999999999999998 88887653221 122222223333455677889999999999
Q ss_pred ccCcCCCCCHHHHHHHHHHHhhhh
Q 014478 226 QSEARERPNAKSLVISLMSLQKEA 249 (424)
Q Consensus 226 ~~dp~~Rps~~~~~~~l~~~~~~~ 249 (424)
+.||++|||+.++++.|+.+....
T Consensus 288 ~~~p~~Rps~~~l~~~L~~~~~~~ 311 (333)
T 1mqb_A 288 QQERARRPKFADIVSILDKLIRAP 311 (333)
T ss_dssp CSSTTTSCCHHHHHHHHHHHHHSG
T ss_pred CCChhhCcCHHHHHHHHHHHHhcc
Confidence 999999999999999999988653
|
| >3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.6e-44 Score=325.67 Aligned_cols=239 Identities=20% Similarity=0.288 Sum_probs=203.5
Q ss_pred CCCcccceeee-ecceecccccCCCchhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHhHhccCC
Q 014478 2 GGRCSKFSICW-FHCHLKSSVLESSDLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWE 80 (424)
Q Consensus 2 G~~g~v~~~~~-~~~~v~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~ 80 (424)
|++|.||.+.+ .+..+++|++.......+.+.+|++++++++||||+++++++...+..++||||+++++|.+++.. .
T Consensus 19 G~~g~V~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~-~ 97 (267)
T 3t9t_A 19 GQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTEFMEHGCLSDYLRT-Q 97 (267)
T ss_dssp ETTEEEEEEEETTTEEEEEEEECTTTBCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEECCCTTCBHHHHHHH-T
T ss_pred CCceeEEEEEecCCCeEEEEEccccCCCHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCeEEEEeCCCCCcHHHHHhh-C
Confidence 89999999988 455688888877766678899999999999999999999999999999999999999999999965 3
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCC-----CccccCccCCCccc
Q 014478 81 TQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG-----KSYSTNLAFTPPEY 155 (424)
Q Consensus 81 ~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~-----~~~~gt~~y~aPE~ 155 (424)
...+++..++.++.|++.||.|||+++ ++||||||+||+++.++.+||+|||+++..... ....+|..|+|||+
T Consensus 98 ~~~~~~~~~~~~~~~i~~~l~~lH~~~-i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~ 176 (267)
T 3t9t_A 98 RGLFAAETLLGMCLDVCEGMAYLEEAC-VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEV 176 (267)
T ss_dssp TTCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSSCCGGGEEECGGGCEEECCTTGGGGBCCHHHHSTTSTTCCGGGCCHHH
T ss_pred cccCCHHHHHHHHHHHHHHHHHHHhCC-cccCCCchheEEECCCCCEEEcccccccccccccccccccccccccccChhh
Confidence 457899999999999999999999999 999999999999999999999999998865432 23456788999999
Q ss_pred cccCCCCCCcceehhHHHHHHHhh-CCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHHHHHHHHHhcccCcCCCCC
Q 014478 156 MRTGRVTPESVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERPN 234 (424)
Q Consensus 156 ~~~~~~~~~~Dv~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps 234 (424)
+.+..++.++||||||+++|+|++ |..||....... ....+........+..+++++.+++.+||+.||++|||
T Consensus 177 ~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~-----~~~~i~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps 251 (267)
T 3t9t_A 177 FSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSE-----VVEDISTGFRLYKPRLASTHVYQIMNHCWRERPEDRPA 251 (267)
T ss_dssp HHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHH-----HHHHHHTTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCC
T ss_pred hcCCCccchhchhhhHHHHHHHhccCCCCCCCCCHHH-----HHHHHhcCCcCCCCccCcHHHHHHHHHHccCChhhCcC
Confidence 998889999999999999999999 787776532211 11122222333445567889999999999999999999
Q ss_pred HHHHHHHHHHHhh
Q 014478 235 AKSLVISLMSLQK 247 (424)
Q Consensus 235 ~~~~~~~l~~~~~ 247 (424)
+.+++++|+.+.+
T Consensus 252 ~~~ll~~L~~l~~ 264 (267)
T 3t9t_A 252 FSRLLRQLAEIAE 264 (267)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh
Confidence 9999999998875
|
| >3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-44 Score=341.66 Aligned_cols=239 Identities=15% Similarity=0.088 Sum_probs=189.0
Q ss_pred CCCcccceeee--ecceecccccCCCchhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHhHhccC
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESSDLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHW 79 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~ 79 (424)
|+||.||.+.. .+..|++|++.......+.+.+|+.+++.++||||+++++++......++||||++||+|.+++..
T Consensus 31 G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~- 109 (361)
T 3uc3_A 31 GNFGVARLMRDKLTKELVAVKYIERGAAIDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIIMEYASGGELYERICN- 109 (361)
T ss_dssp STTSSEEEEEETTTCCEEEEEEEESSTTSCHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEECCCSCBHHHHHHH-
T ss_pred CCCEEEEEEEECCCCcEEEEEEEecCccccHHHHHHHHHHHhCCCCCCCcEEEEEeeCCEEEEEEEeCCCCCHHHHHHh-
Confidence 89999999987 567789998877666667889999999999999999999999999999999999999999999864
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCC--eEEccccccccCCC---CCccccCccCCCcc
Q 014478 80 ETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGN--PRLSSFGLMKNSRD---GKSYSTNLAFTPPE 154 (424)
Q Consensus 80 ~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~--~kl~Dfg~~~~~~~---~~~~~gt~~y~aPE 154 (424)
.+.+++..++.++.|++.||.|||+++ |+||||||+|||++.++. +||+|||+++.... .....||+.|+|||
T Consensus 110 -~~~~~~~~~~~i~~ql~~~L~~LH~~~-ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE 187 (361)
T 3uc3_A 110 -AGRFSEDEARFFFQQLLSGVSYCHSMQ-ICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPE 187 (361)
T ss_dssp -HSSCCHHHHHHHHHHHHHHHHHHHHTT-CCSCCCCGGGEEECSSSSCCEEECCCCCC---------------CTTSCHH
T ss_pred -cCCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCCHHHEEEcCCCCceEEEeecCccccccccCCCCCCcCCCCcCChh
Confidence 457999999999999999999999999 999999999999987765 99999999875332 23457899999999
Q ss_pred ccccCCCCCC-cceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHHHHHHHHHhcccCcCCCC
Q 014478 155 YMRTGRVTPE-SVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERP 233 (424)
Q Consensus 155 ~~~~~~~~~~-~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rp 233 (424)
++.+..++.+ +|||||||++|+|++|+.||............................+++++.+||.+||..||++||
T Consensus 188 ~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rp 267 (361)
T 3uc3_A 188 VLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRDYRKTIQRILSVKYSIPDDIRISPECCHLISRIFVADPATRI 267 (361)
T ss_dssp HHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC----CCCHHHHHHHHHTTCCCCCTTSCCCHHHHHHHHHHSCSCTTTSC
T ss_pred hhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCCccHHHHHHHHHHHhcCCCCCCCcCCCCHHHHHHHHHHccCChhHCc
Confidence 9988877655 899999999999999998887532111111111122222222222335678999999999999999999
Q ss_pred CHHHHHHHHH
Q 014478 234 NAKSLVISLM 243 (424)
Q Consensus 234 s~~~~~~~l~ 243 (424)
|+.+++++-.
T Consensus 268 s~~ell~hp~ 277 (361)
T 3uc3_A 268 SIPEIKTHSW 277 (361)
T ss_dssp CHHHHHTSHH
T ss_pred CHHHHHhCcc
Confidence 9999998744
|
| >3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-43 Score=332.83 Aligned_cols=245 Identities=21% Similarity=0.306 Sum_probs=205.0
Q ss_pred CCCcccceeee------ecceecccccCCCc--hhhhHHHHHHHHHhcCCCcCcceeEEEEEeC--CeeeEEEecCCCCC
Q 014478 2 GGRCSKFSICW------FHCHLKSSVLESSD--LGETLNLEEAKAVGNLRSERLANLIGCCYEA--DERLLVAEFMPNET 71 (424)
Q Consensus 2 G~~g~v~~~~~------~~~~v~~~~~~~~~--~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~--~~~~lv~e~~~~gs 71 (424)
|+||.||.++| .+..|++|++.... ...+.+.+|++++++++||||+++++++.+. ...++||||+++|+
T Consensus 42 G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~ 121 (318)
T 3lxp_A 42 GHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQLVMEYVPLGS 121 (318)
T ss_dssp CSSEEEEEEEECSCC--CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTTTEEEEEECCCTTCB
T ss_pred CCCeEEEEEEEccCCCCCCcEEEEEEeccccChHHHHHHHHHHHHHHhCCCcchhhEEEEEecCCCceEEEEEecccCCc
Confidence 89999988876 45668888876543 3467789999999999999999999999884 56789999999999
Q ss_pred HHhHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCCC-------cc
Q 014478 72 LAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGK-------SY 144 (424)
Q Consensus 72 L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~~-------~~ 144 (424)
|.+++.. ..+++.+++.++.|++.||.|||+++ ++||||||+||+++.++.+||+|||+++...... ..
T Consensus 122 L~~~l~~---~~~~~~~~~~i~~~l~~~l~~LH~~~-ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~ 197 (318)
T 3lxp_A 122 LRDYLPR---HSIGLAQLLLFAQQICEGMAYLHAQH-YIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDG 197 (318)
T ss_dssp HHHHGGG---SCCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEECTTCCEEECCGGGCEECCTTCSEEEC---C
T ss_pred HHHHHhh---CCCCHHHHHHHHHHHHHHHHHHHhCC-ccCCCCchheEEEcCCCCEEECCccccccccccccccccccCC
Confidence 9999964 45999999999999999999999999 9999999999999999999999999998765432 33
Q ss_pred ccCccCCCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHH----------HhhhhhhHhhhcccCCCCCchhH
Q 014478 145 STNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDL----------IRSKNFLLLMDSALEGHFSNDEG 214 (424)
Q Consensus 145 ~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~ 214 (424)
.+|..|+|||++.+..++.++|||||||++|+|++|..||....... .........+........+..++
T Consensus 198 ~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (318)
T 3lxp_A 198 DSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELLERGERLPRPDKCP 277 (318)
T ss_dssp CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCHHHHHHHHHHHHHTTCCCCCCTTCC
T ss_pred CCCceeeChHHhcCCCCCcHHHHHHHHHHHHHHHhCCCcccccchhhhhhhcccccchhHHHHHHHHhcccCCCCCcccc
Confidence 56788999999998889999999999999999999998776532211 11122233344444555677788
Q ss_pred HHHHHHHHHhcccCcCCCCCHHHHHHHHHHHhhhhh
Q 014478 215 TELVRLASRCLQSEARERPNAKSLVISLMSLQKEAE 250 (424)
Q Consensus 215 ~~l~~li~~cl~~dp~~Rps~~~~~~~l~~~~~~~~ 250 (424)
+++.++|.+||+.||.+|||+.++++.|+.+.+...
T Consensus 278 ~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~~~~ 313 (318)
T 3lxp_A 278 AEVYHLMKNCWETEASFRPTFENLIPILKTVHEKYQ 313 (318)
T ss_dssp HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHHhhc
Confidence 999999999999999999999999999999887654
|
| >3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-43 Score=345.62 Aligned_cols=233 Identities=14% Similarity=0.144 Sum_probs=193.3
Q ss_pred CCCcccceeee--ecceecccccCCCc---hhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHhHh
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESSD---LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHL 76 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~~---~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~l 76 (424)
|+||.||.+.. .+..+++|++.... ...+.+.+|+++++.++||||+++++++.+++..++||||++||+|.+++
T Consensus 22 G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lv~E~~~gg~L~~~i 101 (444)
T 3soa_A 22 GAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDI 101 (444)
T ss_dssp C--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEEEEEECSSEEEEEECCCBCCBHHHHH
T ss_pred CCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEECCEEEEEEEeCCCCCHHHHH
Confidence 89999999987 56777777775443 33567889999999999999999999999999999999999999999998
Q ss_pred ccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeec---CCCCeEEccccccccCCCC----CccccCcc
Q 014478 77 FHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFD---KDGNPRLSSFGLMKNSRDG----KSYSTNLA 149 (424)
Q Consensus 77 ~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~---~~~~~kl~Dfg~~~~~~~~----~~~~gt~~ 149 (424)
.. ...+++..+..++.||+.||.|||+++ |+||||||+|||++ .++.+||+|||+++..... ....||+.
T Consensus 102 ~~--~~~~~e~~~~~i~~qil~aL~~lH~~g-ivHrDlKp~NIll~~~~~~~~vkL~DFG~a~~~~~~~~~~~~~~gt~~ 178 (444)
T 3soa_A 102 VA--REYYSEADASHCIQQILEAVLHCHQMG-VVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAGTPG 178 (444)
T ss_dssp HH--CSCCCHHHHHHHHHHHHHHHHHHHHTT-CBCCCCSSTTEEESBSSTTCCEEECCCSSCBCCCTTCCBCCCSCSCGG
T ss_pred HH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-ccccCCCHHHEEEeccCCCCcEEEccCceeEEecCCCceeecccCCcc
Confidence 75 467999999999999999999999999 99999999999997 4678999999999876543 23578999
Q ss_pred CCCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhcc--cCCCCCchhHHHHHHHHHHhccc
Q 014478 150 FTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSA--LEGHFSNDEGTELVRLASRCLQS 227 (424)
Q Consensus 150 y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~li~~cl~~ 227 (424)
|+|||++.+..++.++|||||||++|+|++|..||......... ..+.... ........+++++.+||.+||+.
T Consensus 179 Y~APE~l~~~~~~~~~DIwSlGvilyell~G~~Pf~~~~~~~~~----~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~ 254 (444)
T 3soa_A 179 YLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQHRLY----QQIKAGAYDFPSPEWDTVTPEAKDLINKMLTI 254 (444)
T ss_dssp GCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHH----HHHHHTCCCCCTTTTTTSCHHHHHHHHHHSCS
T ss_pred cCCHHHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCccHHHHH----HHHHhCCCCCCccccccCCHHHHHHHHHHcCC
Confidence 99999999889999999999999999999999888764322111 1111111 11122235688999999999999
Q ss_pred CcCCCCCHHHHHHH
Q 014478 228 EARERPNAKSLVIS 241 (424)
Q Consensus 228 dp~~Rps~~~~~~~ 241 (424)
||++|||+.+++++
T Consensus 255 dP~~Rpta~e~L~h 268 (444)
T 3soa_A 255 NPSKRITAAEALKH 268 (444)
T ss_dssp STTTSCCHHHHHHS
T ss_pred ChhHCCCHHHHhcC
Confidence 99999999999986
|
| >4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-44 Score=334.49 Aligned_cols=239 Identities=22% Similarity=0.295 Sum_probs=196.9
Q ss_pred CCCcccceeeeec---------ceecccccCCCc-hhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCC
Q 014478 2 GGRCSKFSICWFH---------CHLKSSVLESSD-LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNET 71 (424)
Q Consensus 2 G~~g~v~~~~~~~---------~~v~~~~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gs 71 (424)
|+||.||.+.+.. ..+++|++.... ...+.+.+|++++++++||||+++++++..++..++||||++||+
T Consensus 19 G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~ 98 (289)
T 4fvq_A 19 GTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVCVCGDENILVQEFVKFGS 98 (289)
T ss_dssp ETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGGGGGHHHHHHHHHHHHTSCCTTBCCEEEEECCTTCCEEEEECCTTCB
T ss_pred CCCceEEEEEEecccccccccchhhhhhhcccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEeCCCCEEEEECCCCCC
Confidence 8999999998743 347777765433 446789999999999999999999999999999999999999999
Q ss_pred HHhHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCC--------eEEccccccccCCCCCc
Q 014478 72 LAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGN--------PRLSSFGLMKNSRDGKS 143 (424)
Q Consensus 72 L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~--------~kl~Dfg~~~~~~~~~~ 143 (424)
|.+++.. ....+++.+++.++.||+.||.|||+++ |+||||||+|||++.++. +||+|||++........
T Consensus 99 L~~~l~~-~~~~~~~~~~~~i~~qi~~~L~~LH~~~-ivH~Dlkp~NIll~~~~~~~~~~~~~~kl~Dfg~~~~~~~~~~ 176 (289)
T 4fvq_A 99 LDTYLKK-NKNCINILWKLEVAKQLAAAMHFLEENT-LIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKDI 176 (289)
T ss_dssp HHHHHHH-TGGGCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEEEECCBGGGTBCCEEEECCCCSCTTTSCHHH
T ss_pred HHHHHHh-CCCCCCHHHHHHHHHHHHHHHHHHhhCC-eECCCcCcceEEEecCCcccccccceeeeccCcccccccCccc
Confidence 9999975 3445999999999999999999999999 999999999999988887 99999999987766666
Q ss_pred cccCccCCCcccccc-CCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHHHHHHHH
Q 014478 144 YSTNLAFTPPEYMRT-GRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLAS 222 (424)
Q Consensus 144 ~~gt~~y~aPE~~~~-~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 222 (424)
..+|+.|+|||++.+ ..++.++|||||||++|+|++|..|+....... ....... .....+...++++.+++.
T Consensus 177 ~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~----~~~~~~~--~~~~~~~~~~~~l~~li~ 250 (289)
T 4fvq_A 177 LQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDSQ----RKLQFYE--DRHQLPAPKAAELANLIN 250 (289)
T ss_dssp HHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHH----HHHHHHH--TTCCCCCCSSCTTHHHHH
T ss_pred cCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCCccccchH----HHHHHhh--ccCCCCCCCCHHHHHHHH
Confidence 678999999999987 668999999999999999999765554331111 1111111 122344455678999999
Q ss_pred HhcccCcCCCCCHHHHHHHHHHHhhh
Q 014478 223 RCLQSEARERPNAKSLVISLMSLQKE 248 (424)
Q Consensus 223 ~cl~~dp~~Rps~~~~~~~l~~~~~~ 248 (424)
+||+.||++|||+.+++++|+.+...
T Consensus 251 ~~l~~dp~~Rps~~~ll~~l~~l~~p 276 (289)
T 4fvq_A 251 NCMDYEPDHRPSFRAIIRDLNSLFTP 276 (289)
T ss_dssp HHSCSSGGGSCCHHHHHHHHHTCC--
T ss_pred HHcCCChhHCcCHHHHHHHHHHhcCC
Confidence 99999999999999999999988754
|
| >3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.3e-44 Score=332.13 Aligned_cols=238 Identities=16% Similarity=0.209 Sum_probs=188.4
Q ss_pred CCCcccceeeeecceecccccCCCchhhhHHHHHHHHHhc--CCCcCcceeEEEEEeC----CeeeEEEecCCCCCHHhH
Q 014478 2 GGRCSKFSICWFHCHLKSSVLESSDLGETLNLEEAKAVGN--LRSERLANLIGCCYEA----DERLLVAEFMPNETLAKH 75 (424)
Q Consensus 2 G~~g~v~~~~~~~~~v~~~~~~~~~~~~~~~~~E~~~l~~--l~h~~iv~~~~~~~~~----~~~~lv~e~~~~gsL~~~ 75 (424)
|+||.||++.+.+..|++|++.... ...+.+|.+++.. ++||||+++++++... ...++||||+++|+|.++
T Consensus 19 G~~g~V~~~~~~~~~vavK~~~~~~--~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~ 96 (301)
T 3q4u_A 19 GRYGEVWRGSWQGENVAVKIFSSRD--EKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQLWLITHYHEMGSLYDY 96 (301)
T ss_dssp CSSEEEEEEEETTEEEEEEEECGGG--HHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTEEEEEEEECCCTTCBHHHH
T ss_pred CCCcEEEEEEECCEEEEEEEecccc--chhhHHHHHHHHHhhccCcCeeeEEEeeccccCCCceeEEehhhccCCCHHHH
Confidence 8999999999999999999886543 3455566666655 7999999999997653 347899999999999999
Q ss_pred hccCCCCCCCHHHHHHHHHHHHHHHHHHH--------hCCCcccccCCCCCeeecCCCCeEEccccccccCCCC------
Q 014478 76 LFHWETQPMKWAMRLRVALYLAQALEYCS--------SKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG------ 141 (424)
Q Consensus 76 l~~~~~~~l~~~~~~~i~~qi~~~L~~lH--------~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~------ 141 (424)
+. ...+++..++.++.|++.||.||| +++ |+||||||+|||++.++.+||+|||+++.....
T Consensus 97 l~---~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~-ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~ 172 (301)
T 3q4u_A 97 LQ---LTTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPA-IAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDV 172 (301)
T ss_dssp HT---TCCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCE-EECSCCCGGGEEECTTSCEEECCCTTCEEEETTTTEEEC
T ss_pred Hh---hcccCHHHHHHHHHHHHHHHHHHHHhhhhccCCCC-eecCCCChHhEEEcCCCCEEEeeCCCeeecccccccccc
Confidence 94 457999999999999999999999 888 999999999999999999999999998754332
Q ss_pred --CccccCccCCCccccccC------CCCCCcceehhHHHHHHHhhC----------CCCCCchhhHHHhhhhhhHhh-h
Q 014478 142 --KSYSTNLAFTPPEYMRTG------RVTPESVVYSFGTMLLDLLSG----------KHIPPSHALDLIRSKNFLLLM-D 202 (424)
Q Consensus 142 --~~~~gt~~y~aPE~~~~~------~~~~~~Dv~slG~~l~el~~g----------~~~~~~~~~~~~~~~~~~~~~-~ 202 (424)
....||+.|+|||++.+. .++.++|||||||++|||++| ..||................. .
T Consensus 173 ~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~~~~~~~pf~~~~~~~~~~~~~~~~~~~ 252 (301)
T 3q4u_A 173 GNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVPNDPSFEDMRKVVCV 252 (301)
T ss_dssp CCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTT
T ss_pred cccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcCccccccccccccccCCCCcchhhhhHHHhc
Confidence 233789999999999876 456799999999999999999 666644211111111111111 1
Q ss_pred cccCCCCC-----chhHHHHHHHHHHhcccCcCCCCCHHHHHHHHHHH
Q 014478 203 SALEGHFS-----NDEGTELVRLASRCLQSEARERPNAKSLVISLMSL 245 (424)
Q Consensus 203 ~~~~~~~~-----~~~~~~l~~li~~cl~~dp~~Rps~~~~~~~l~~~ 245 (424)
.......+ ..+++++.+++.+||+.||++|||+.++++.|+.+
T Consensus 253 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i 300 (301)
T 3q4u_A 253 DQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLTKI 300 (301)
T ss_dssp SCCCCCCCGGGGGSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHH
T ss_pred cCCCCCCChhhccCccHHHHHHHHHHHhhcChhhCCCHHHHHHHHhcc
Confidence 11122222 34778999999999999999999999999999875
|
| >1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-43 Score=328.09 Aligned_cols=241 Identities=19% Similarity=0.251 Sum_probs=202.8
Q ss_pred CCCcccceeee----ecceecccccCCC--chhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHhH
Q 014478 2 GGRCSKFSICW----FHCHLKSSVLESS--DLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKH 75 (424)
Q Consensus 2 G~~g~v~~~~~----~~~~v~~~~~~~~--~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~ 75 (424)
|++|.||.+.+ .+..+++|++... ....+.+.+|++++++++||||+++++++ ..+..++||||+++++|.++
T Consensus 21 G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~-~~~~~~lv~e~~~~~~L~~~ 99 (287)
T 1u59_A 21 GNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVC-QAEALMLVMEMAGGGPLHKF 99 (287)
T ss_dssp CTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-ESSSEEEEEECCTTEEHHHH
T ss_pred cCceeEEEeEeccCCCcceEEEEecCCccchhHHHHHHHHHHHHHhCCCCCEeEEEEEe-cCCCcEEEEEeCCCCCHHHH
Confidence 89999999986 3556788887653 34567899999999999999999999999 45668999999999999999
Q ss_pred hccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCC-------CccccCc
Q 014478 76 LFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG-------KSYSTNL 148 (424)
Q Consensus 76 l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~-------~~~~gt~ 148 (424)
+.. ....+++.+++.++.|++.||.|||+++ ++||||||+||+++.++.+||+|||+++..... ....+|+
T Consensus 100 l~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~~-i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~ 177 (287)
T 1u59_A 100 LVG-KREEIPVSNVAELLHQVSMGMKYLEEKN-FVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPL 177 (287)
T ss_dssp HTT-CTTTSCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEEEETTEEEECCCTTCEECTTCSCEECCCCSSCCCG
T ss_pred HHh-CCccCCHHHHHHHHHHHHHHHHHHHHCC-EeeCCCchheEEEcCCCCEEECcccceeeeccCcceeeccccccccc
Confidence 964 3567999999999999999999999999 999999999999999999999999999876432 2234578
Q ss_pred cCCCccccccCCCCCCcceehhHHHHHHHhh-CCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHHHHHHHHHhccc
Q 014478 149 AFTPPEYMRTGRVTPESVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQS 227 (424)
Q Consensus 149 ~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~ 227 (424)
.|+|||++.+..++.++||||||+++|+|++ |..||...... .....+........+..+++++.++|.+||+.
T Consensus 178 ~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~-----~~~~~i~~~~~~~~~~~~~~~l~~li~~~l~~ 252 (287)
T 1u59_A 178 KWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGP-----EVMAFIEQGKRMECPPECPPELYALMSDCWIY 252 (287)
T ss_dssp GGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTH-----HHHHHHHTTCCCCCCTTCCHHHHHHHHHTTCS
T ss_pred cccCHHHhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHH-----HHHHHHhcCCcCCCCCCcCHHHHHHHHHHcCC
Confidence 8999999998889999999999999999998 99887653221 12222223334456677889999999999999
Q ss_pred CcCCCCCHHHHHHHHHHHhhhhh
Q 014478 228 EARERPNAKSLVISLMSLQKEAE 250 (424)
Q Consensus 228 dp~~Rps~~~~~~~l~~~~~~~~ 250 (424)
||++|||+.+++++|+.+..+..
T Consensus 253 ~p~~Rps~~~l~~~l~~~~~~~~ 275 (287)
T 1u59_A 253 KWEDRPDFLTVEQRMRACYYSLA 275 (287)
T ss_dssp SGGGSCCHHHHHHHHHHHHHHHH
T ss_pred ChhhCcCHHHHHHHHHHHHHhcC
Confidence 99999999999999999987654
|
| >2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.2e-44 Score=335.49 Aligned_cols=235 Identities=13% Similarity=0.125 Sum_probs=193.6
Q ss_pred CCCcccceeee--ecceecccccCCCch-------hhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCH
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESSDL-------GETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETL 72 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~~~-------~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL 72 (424)
|+||.||.+.+ .+..+++|++..... ..+.+.+|+.+|+.++||||+++++++......++||||+++|+|
T Consensus 22 G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L 101 (326)
T 2y0a_A 22 GQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGEL 101 (326)
T ss_dssp CSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEECCCSCBH
T ss_pred CCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEEEcCCCCCH
Confidence 89999999987 467788887754321 356789999999999999999999999999999999999999999
Q ss_pred HhHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCC----CeEEccccccccCCCC---Cccc
Q 014478 73 AKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDG----NPRLSSFGLMKNSRDG---KSYS 145 (424)
Q Consensus 73 ~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~----~~kl~Dfg~~~~~~~~---~~~~ 145 (424)
.+++.. ...+++.+++.++.||+.||.|||+++ |+||||||+|||++.++ .+||+|||+++..... ....
T Consensus 102 ~~~l~~--~~~~~~~~~~~i~~qi~~al~~lH~~~-ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~ 178 (326)
T 2y0a_A 102 FDFLAE--KESLTEEEATEFLKQILNGVYYLHSLQ-IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF 178 (326)
T ss_dssp HHHHTT--SSCCBHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEESCSSSSSCCEEECCCTTCEECCTTSCCCCCC
T ss_pred HHHHHh--cCCcCHHHHHHHHHHHHHHHHHHHHCC-eEcCCCCHHHEEEecCCCCCCCEEEEECCCCeECCCCCcccccc
Confidence 999964 567999999999999999999999999 99999999999998887 7999999999876533 3456
Q ss_pred cCccCCCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHHHHHHHHHhc
Q 014478 146 TNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCL 225 (424)
Q Consensus 146 gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl 225 (424)
||+.|+|||++.+..++.++|||||||++|+|++|..||............ ..............+++.+.+||.+||
T Consensus 179 gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~li~~~L 256 (326)
T 2y0a_A 179 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANV--SAVNYEFEDEYFSNTSALAKDFIRRLL 256 (326)
T ss_dssp SCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHH--HHTCCCCCHHHHTTSCHHHHHHHHHHS
T ss_pred CCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHH--HhcCCCcCccccccCCHHHHHHHHHHc
Confidence 899999999999889999999999999999999999888764222111110 000001111111345778999999999
Q ss_pred ccCcCCCCCHHHHHHH
Q 014478 226 QSEARERPNAKSLVIS 241 (424)
Q Consensus 226 ~~dp~~Rps~~~~~~~ 241 (424)
..||++|||+.+++++
T Consensus 257 ~~dP~~Rpt~~e~l~h 272 (326)
T 2y0a_A 257 VKDPKKRMTIQDSLQH 272 (326)
T ss_dssp CSSGGGSCCHHHHHHS
T ss_pred cCChhhCCCHHHHhcC
Confidence 9999999999999875
|
| >2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-43 Score=331.54 Aligned_cols=241 Identities=19% Similarity=0.277 Sum_probs=202.3
Q ss_pred CCCcccceeeeec-------ceecccccCCC--chhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCH
Q 014478 2 GGRCSKFSICWFH-------CHLKSSVLESS--DLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETL 72 (424)
Q Consensus 2 G~~g~v~~~~~~~-------~~v~~~~~~~~--~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL 72 (424)
|+||.||.+.+.. ..+++|++... ....+.+.+|++++++++||||+++++++..++..++||||+++|+|
T Consensus 34 G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L 113 (314)
T 2ivs_A 34 GEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSL 113 (314)
T ss_dssp CSSSEEEEEEEETGGGCSSEEEEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEEEEECCTTCBH
T ss_pred cCCeeEEEEEEeccCcccCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCceeeEEEEEecCCceEEEEeecCCCCH
Confidence 8999999998732 56777777543 33457889999999999999999999999999999999999999999
Q ss_pred HhHhccCCC----------------------CCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEc
Q 014478 73 AKHLFHWET----------------------QPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLS 130 (424)
Q Consensus 73 ~~~l~~~~~----------------------~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~ 130 (424)
.+++..... ..+++.+++.++.||+.||.|||+++ ++||||||+||+++.++.+||+
T Consensus 114 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~-ivH~dikp~NIli~~~~~~kl~ 192 (314)
T 2ivs_A 114 RGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMK-LVHRDLAARNILVAEGRKMKIS 192 (314)
T ss_dssp HHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEEETTTEEEEC
T ss_pred HHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHHCC-CcccccchheEEEcCCCCEEEc
Confidence 999975322 34899999999999999999999999 9999999999999999999999
Q ss_pred cccccccCCCC------CccccCccCCCccccccCCCCCCcceehhHHHHHHHhh-CCCCCCchhhHHHhhhhhhHhhhc
Q 014478 131 SFGLMKNSRDG------KSYSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKNFLLLMDS 203 (424)
Q Consensus 131 Dfg~~~~~~~~------~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~ 203 (424)
|||+++..... ....+|+.|+|||.+.+..++.++|||||||++|+|++ |..||..... ......+..
T Consensus 193 Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~-----~~~~~~~~~ 267 (314)
T 2ivs_A 193 DFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPP-----ERLFNLLKT 267 (314)
T ss_dssp CCTTCEECTTTSCEECSSCCCSCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCG-----GGHHHHHHT
T ss_pred cccccccccccccceeccCCCCcccccChhhhcCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCCH-----HHHHHHhhc
Confidence 99999865433 22346788999999998889999999999999999999 8888765422 222233333
Q ss_pred ccCCCCCchhHHHHHHHHHHhcccCcCCCCCHHHHHHHHHHHhhh
Q 014478 204 ALEGHFSNDEGTELVRLASRCLQSEARERPNAKSLVISLMSLQKE 248 (424)
Q Consensus 204 ~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~~~~~l~~~~~~ 248 (424)
......+..+++++.+++.+||+.||++|||+.+++++|+.+...
T Consensus 268 ~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~ 312 (314)
T 2ivs_A 268 GHRMERPDNCSEEMYRLMLQCWKQEPDKRPVFADISKDLEKMMVK 312 (314)
T ss_dssp TCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred CCcCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhh
Confidence 334456667889999999999999999999999999999988654
|
| >3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7e-44 Score=335.27 Aligned_cols=242 Identities=27% Similarity=0.416 Sum_probs=199.8
Q ss_pred CCCcccceeee-ecceecccccCCCch--hhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHhHhcc
Q 014478 2 GGRCSKFSICW-FHCHLKSSVLESSDL--GETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFH 78 (424)
Q Consensus 2 G~~g~v~~~~~-~~~~v~~~~~~~~~~--~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~ 78 (424)
|++|.||.+.+ .+..+++|++..... ....+.+|+++++.++||||+++++++......++||||+++|+|.+++..
T Consensus 41 G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~ 120 (326)
T 3uim_A 41 GGFGKVYKGRLADGTLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRE 120 (326)
T ss_dssp CSSSEEEEECCSSSCCEEEEECCC-----CCCHHHHHHHGGGTCCCTTBCCCCEEECCSSCCEEEEECCTTCBHHHHHHC
T ss_pred CCCcEEEEEEecCCCEEEEEEeccccCchHHHHHHHHHHHHHhccCCCccceEEEEecCCceEEEEEeccCCCHHHHHHh
Confidence 89999999987 467788888765432 344789999999999999999999999999999999999999999999975
Q ss_pred CC--CCCCCHHHHHHHHHHHHHHHHHHHhC---CCcccccCCCCCeeecCCCCeEEccccccccCCCC-----CccccCc
Q 014478 79 WE--TQPMKWAMRLRVALYLAQALEYCSSK---GRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG-----KSYSTNL 148 (424)
Q Consensus 79 ~~--~~~l~~~~~~~i~~qi~~~L~~lH~~---~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~-----~~~~gt~ 148 (424)
.. ..++++..+..++.|++.||.|||++ + ++||||||+|||++.++.+||+|||+++..... ....||+
T Consensus 121 ~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~-ivH~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~gt~ 199 (326)
T 3uim_A 121 RPESQPPLDWPKRQRIALGSARGLAYLHDHCDPK-IIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTI 199 (326)
T ss_dssp CSTTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSC-EECCCCSGGGEEECTTCCEEECCCSSCEECCSSSSCEECCCCSCG
T ss_pred ccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCC-eEeCCCchhhEEECCCCCEEeccCccccccCcccccccccccCCc
Confidence 32 33599999999999999999999999 8 999999999999999999999999999865432 2345899
Q ss_pred cCCCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHH-------------hhhhhhHhhhcccCCCCCchhHH
Q 014478 149 AFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLI-------------RSKNFLLLMDSALEGHFSNDEGT 215 (424)
Q Consensus 149 ~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~ 215 (424)
.|+|||++.+..++.++|||||||++|+|++|..||........ .........+.......+...+.
T Consensus 200 ~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (326)
T 3uim_A 200 GHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEALVDVDLQGNYKDEEVE 279 (326)
T ss_dssp GGCCHHHHHHSEECHHHHHHHHHHHHHHHHHCCCSBCHHHHTTTSCSBHHHHHTTTTSSCCSTTSSCTTCTTSCCHHHHH
T ss_pred CccCHHHhccCCCCccccchhHHHHHHHHHhCCCcccccccccccchhHHHHHHHHhhchhhhhhcChhhccccCHHHHH
Confidence 99999999988899999999999999999999988863211100 11112222233334455667789
Q ss_pred HHHHHHHHhcccCcCCCCCHHHHHHHHHH
Q 014478 216 ELVRLASRCLQSEARERPNAKSLVISLMS 244 (424)
Q Consensus 216 ~l~~li~~cl~~dp~~Rps~~~~~~~l~~ 244 (424)
++.+++.+||+.||.+|||+.+++++|+.
T Consensus 280 ~l~~li~~cl~~dP~~Rps~~ell~~L~~ 308 (326)
T 3uim_A 280 QLIQVALLCTQSSPMERPKMSEVVRMLEG 308 (326)
T ss_dssp HHHHHHHHHTCSCGGGSCCHHHHHHHHHT
T ss_pred HHHHHHHHHhCcCCccCCCHHHHHHHhcC
Confidence 99999999999999999999999999975
|
| >2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-43 Score=331.47 Aligned_cols=233 Identities=18% Similarity=0.214 Sum_probs=195.7
Q ss_pred CCCcccceeee--ecceecccccCCCc-hhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHhHhcc
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESSD-LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFH 78 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~ 78 (424)
|++|.||.+.. .+..|++|++.... ...+.+.+|+.++++++||||+++++++...+..++||||++||+|.+++.
T Consensus 56 G~~g~V~~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~- 134 (321)
T 2c30_A 56 GSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKSYLVGEELWVLMEFLQGGALTDIVS- 134 (321)
T ss_dssp ETTEEEEEEEETTTCCEEEEEEEETTTCCSHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEECCCCSCBHHHHHT-
T ss_pred CCCeEEEEEEECCCCcEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEecCCCCCHHHHHH-
Confidence 89999999987 47788888875433 345778999999999999999999999999999999999999999999985
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCC----CccccCccCCCcc
Q 014478 79 WETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG----KSYSTNLAFTPPE 154 (424)
Q Consensus 79 ~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~----~~~~gt~~y~aPE 154 (424)
...+++..+..++.|++.||.|||+++ ++||||||+|||++.++.+||+|||++...... ....||+.|+|||
T Consensus 135 --~~~l~~~~~~~i~~qi~~~L~~LH~~~-ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE 211 (321)
T 2c30_A 135 --QVRLNEEQIATVCEAVLQALAYLHAQG-VIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKRKSLVGTPYWMAPE 211 (321)
T ss_dssp --TCCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEECTTCCEEECCCTTCEECCSSSCCBCCCCSCGGGCCHH
T ss_pred --hcCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCCHHHEEECCCCcEEEeeeeeeeecccCccccccccCCccccCHh
Confidence 457999999999999999999999999 999999999999999999999999998765432 3457899999999
Q ss_pred ccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhcc-cCCCCCchhHHHHHHHHHHhcccCcCCCC
Q 014478 155 YMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSA-LEGHFSNDEGTELVRLASRCLQSEARERP 233 (424)
Q Consensus 155 ~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~li~~cl~~dp~~Rp 233 (424)
++.+..++.++|||||||++|+|++|..||........ ...+.... .....+..+++++.+++.+||+.||++||
T Consensus 212 ~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rp 287 (321)
T 2c30_A 212 VISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSPVQA----MKRLRDSPPPKLKNSHKVSPVLRDFLERMLVRDPQERA 287 (321)
T ss_dssp HHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHH----HHHHHHSSCCCCTTGGGSCHHHHHHHHHHSCSSTTTSC
T ss_pred hhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH----HHHHhcCCCCCcCccccCCHHHHHHHHHHccCChhhCc
Confidence 99988899999999999999999999988865422111 11111111 11122345678999999999999999999
Q ss_pred CHHHHHHHH
Q 014478 234 NAKSLVISL 242 (424)
Q Consensus 234 s~~~~~~~l 242 (424)
|+.+++++.
T Consensus 288 s~~ell~hp 296 (321)
T 2c30_A 288 TAQELLDHP 296 (321)
T ss_dssp CHHHHHTSG
T ss_pred CHHHHhcCh
Confidence 999998753
|
| >2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-43 Score=333.83 Aligned_cols=243 Identities=14% Similarity=0.113 Sum_probs=197.4
Q ss_pred CCCcccceeee--ecceecccccCCCchhhhHHHHHHHHHhcC-CCcCcceeEEEEEeCCeeeEEEecCCCCCHHhHhcc
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESSDLGETLNLEEAKAVGNL-RSERLANLIGCCYEADERLLVAEFMPNETLAKHLFH 78 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~ 78 (424)
|+||.||.+.. .+..|++|++.... ....+.+|+++++.+ +||||+++++++..++..++||||+ +++|.+++..
T Consensus 20 G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~ 97 (330)
T 2izr_A 20 GNFGELRLGKNLYTNEYVAIKLEPMKS-RAPQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNAMVLELL-GPSLEDLFDL 97 (330)
T ss_dssp -CTTSEEEEEETTTTEEEEEEEEETTC-SSCCHHHHHHHHHHHCSCTTSCCEEEEEEETTEEEEEEECC-CCBHHHHHHH
T ss_pred cCCceEEEEEECCCCcEEEEEEecccc-chHHHHHHHHHHHHhhCCCCCCEEEEEEecCCccEEEEEeC-CCCHHHHHHH
Confidence 89999999985 67778888775443 345688999999999 9999999999999999999999999 9999999975
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCC-----eEEccccccccCCCC-----------C
Q 014478 79 WETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGN-----PRLSSFGLMKNSRDG-----------K 142 (424)
Q Consensus 79 ~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~-----~kl~Dfg~~~~~~~~-----------~ 142 (424)
. ...+++.+++.++.|++.||.|||+++ |+||||||+|||++.++. +||+|||+++..... .
T Consensus 98 ~-~~~~~~~~~~~i~~qi~~~l~~LH~~~-iiHrDlkp~Nill~~~~~~~~~~~kl~DFg~a~~~~~~~~~~~~~~~~~~ 175 (330)
T 2izr_A 98 C-DRTFSLKTVLMIAIQLISRMEYVHSKN-LIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKEYIDPETKKHIPYREHK 175 (330)
T ss_dssp T-TTCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEECCGGGTCTTSEEECCCTTCEESBCTTTCCBCCCCCCC
T ss_pred c-CCCCCHHHHHHHHHHHHHHHHHHHhCC-eeccCCCHHHeeeccCCCCCCceEEEEEcccceeeecCCCCccccccccC
Confidence 3 568999999999999999999999999 999999999999998887 999999999864322 3
Q ss_pred ccccCccCCCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhccc---CCCCCchhHHHHHH
Q 014478 143 SYSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSAL---EGHFSNDEGTELVR 219 (424)
Q Consensus 143 ~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~l~~ 219 (424)
...||+.|+|||++.+..++.++|||||||++|||++|..||.......... ....+..... .......++ ++.+
T Consensus 176 ~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~Pf~~~~~~~~~~-~~~~i~~~~~~~~~~~~~~~~p-~~~~ 253 (330)
T 2izr_A 176 SLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADTLKE-RYQKIGDTKRATPIEVLCENFP-EMAT 253 (330)
T ss_dssp CCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCSSHHH-HHHHHHHHHHHSCHHHHTTTCH-HHHH
T ss_pred CcCCCccccChHHHcCCCCCchhHHHHHHHHHHHHhcCCCCccccccccHHH-HHHHHHhhhccCCHHHHhccCh-HHHH
Confidence 4578999999999999889999999999999999999998887531111100 0011111000 001112245 9999
Q ss_pred HHHHhcccCcCCCCCHHHHHHHHHHHhhhhh
Q 014478 220 LASRCLQSEARERPNAKSLVISLMSLQKEAE 250 (424)
Q Consensus 220 li~~cl~~dp~~Rps~~~~~~~l~~~~~~~~ 250 (424)
++.+||+.||.+||+++++.+.|+.+.+...
T Consensus 254 li~~~l~~~p~~RP~~~~l~~~l~~~~~~~~ 284 (330)
T 2izr_A 254 YLRYVRRLDFFEKPDYDYLRKLFTDLFDRKG 284 (330)
T ss_dssp HHHHHHHCCTTCCCCHHHHHHHHHHHHHHTT
T ss_pred HHHHHHhCCCCCCCCHHHHHHHHHHHHHHcC
Confidence 9999999999999999999999998877654
|
| >1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-43 Score=331.63 Aligned_cols=242 Identities=20% Similarity=0.315 Sum_probs=202.6
Q ss_pred CCCcccceeeee-------cceecccccCCCc--hhhhHHHHHHHHHhcC-CCcCcceeEEEEEeCCeeeEEEecCCCCC
Q 014478 2 GGRCSKFSICWF-------HCHLKSSVLESSD--LGETLNLEEAKAVGNL-RSERLANLIGCCYEADERLLVAEFMPNET 71 (424)
Q Consensus 2 G~~g~v~~~~~~-------~~~v~~~~~~~~~--~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~~~~gs 71 (424)
|+||.||.+.+. +..+++|++.... ...+.+.+|+++++++ +||||+++++++..++..++||||+++|+
T Consensus 34 G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~ 113 (313)
T 1t46_A 34 GAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGD 113 (313)
T ss_dssp CSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCTTEE
T ss_pred cCCcceEEEEEeeccccchhhhhHHHhcCcchhHHHHHHHHHHHHHHhhcccCCCeeeEEEEEecCCCcEEEEecCCCCC
Confidence 899999999863 3567778776443 3457889999999999 99999999999999999999999999999
Q ss_pred HHhHhccCCC----------------CCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEcccccc
Q 014478 72 LAKHLFHWET----------------QPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLM 135 (424)
Q Consensus 72 L~~~l~~~~~----------------~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~ 135 (424)
|.+++..... ..+++.+++.++.|++.||.|||+++ ++||||||+||+++.++.+||+|||++
T Consensus 114 L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~-i~H~dlkp~Nil~~~~~~~kl~Dfg~~ 192 (313)
T 1t46_A 114 LLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKN-CIHRDLAARNILLTHGRITKICDFGLA 192 (313)
T ss_dssp HHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEEETTTEEEECCCGGG
T ss_pred HHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCccceEEEcCCCCEEEcccccc
Confidence 9999975322 25899999999999999999999999 999999999999999999999999999
Q ss_pred ccCCCCC------ccccCccCCCccccccCCCCCCcceehhHHHHHHHhh-CCCCCCchhhHHHhhhhhhHhhhcccCCC
Q 014478 136 KNSRDGK------SYSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKNFLLLMDSALEGH 208 (424)
Q Consensus 136 ~~~~~~~------~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (424)
+...... ...+|+.|+|||.+.+..++.++||||||+++|+|++ |..||...... ..............
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~----~~~~~~~~~~~~~~ 268 (313)
T 1t46_A 193 RDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVD----SKFYKMIKEGFRML 268 (313)
T ss_dssp SCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSS----HHHHHHHHHTCCCC
T ss_pred ccccccccceeccCCCCcceeeChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCCcccch----hHHHHHhccCCCCC
Confidence 8765432 2345788999999998899999999999999999999 88777653211 11222233333444
Q ss_pred CCchhHHHHHHHHHHhcccCcCCCCCHHHHHHHHHHHhhh
Q 014478 209 FSNDEGTELVRLASRCLQSEARERPNAKSLVISLMSLQKE 248 (424)
Q Consensus 209 ~~~~~~~~l~~li~~cl~~dp~~Rps~~~~~~~l~~~~~~ 248 (424)
.+..++.++.+++.+||+.||.+|||+.+++++|+++..+
T Consensus 269 ~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~ 308 (313)
T 1t46_A 269 SPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQISE 308 (313)
T ss_dssp CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred CcccCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHHH
Confidence 5566788999999999999999999999999999998765
|
| >1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=6.8e-44 Score=337.91 Aligned_cols=243 Identities=20% Similarity=0.292 Sum_probs=198.4
Q ss_pred CCCcccceeeee-------cceecccccCCCc--hhhhHHHHHHHHHhcC-CCcCcceeEEEEEeCCeeeEEEecCCCCC
Q 014478 2 GGRCSKFSICWF-------HCHLKSSVLESSD--LGETLNLEEAKAVGNL-RSERLANLIGCCYEADERLLVAEFMPNET 71 (424)
Q Consensus 2 G~~g~v~~~~~~-------~~~v~~~~~~~~~--~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~~~~gs 71 (424)
|+||.||.+.+. +..+++|++.... ...+.+.+|+.++.++ +||||+++++++...+..++||||+++|+
T Consensus 56 G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~e~~~~g~ 135 (344)
T 1rjb_A 56 GAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSGPIYLIFEYCCYGD 135 (344)
T ss_dssp CSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCTTCB
T ss_pred CCCceeEEeeeeccccCCcceEEEEEecccccCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEeeCCccEEEEecCCCCc
Confidence 899999999873 3457777775432 3457899999999999 89999999999999999999999999999
Q ss_pred HHhHhccCCC---------------------CCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEc
Q 014478 72 LAKHLFHWET---------------------QPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLS 130 (424)
Q Consensus 72 L~~~l~~~~~---------------------~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~ 130 (424)
|.+++..... ..+++.+++.++.||+.||.|||+++ |+||||||+|||++.++.+||+
T Consensus 136 L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~-ivH~Dikp~NIll~~~~~~kL~ 214 (344)
T 1rjb_A 136 LLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKS-CVHRDLAARNVLVTHGKVVKIC 214 (344)
T ss_dssp HHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHTT-EEETTCSGGGEEEETTTEEEEC
T ss_pred HHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHhCC-cccCCCChhhEEEcCCCcEEeC
Confidence 9999975322 24899999999999999999999999 9999999999999999999999
Q ss_pred cccccccCCCCC------ccccCccCCCccccccCCCCCCcceehhHHHHHHHhh-CCCCCCchhhHHHhhhhhhHhhhc
Q 014478 131 SFGLMKNSRDGK------SYSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKNFLLLMDS 203 (424)
Q Consensus 131 Dfg~~~~~~~~~------~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~ 203 (424)
|||+++...... ...+|+.|+|||++.+..++.++|||||||++|+|++ |..||..... .......+..
T Consensus 215 Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~----~~~~~~~~~~ 290 (344)
T 1rjb_A 215 DFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIPV----DANFYKLIQN 290 (344)
T ss_dssp CCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCC----SHHHHHHHHT
T ss_pred CCccCcccccCccceeccCccCccCccCHHHhccCCCChhHhHHHHHHHHHHHHcCCCCCcccCCc----HHHHHHHHhc
Confidence 999997654322 2346788999999998899999999999999999998 8888765421 1122223333
Q ss_pred ccCCCCCchhHHHHHHHHHHhcccCcCCCCCHHHHHHHHHHHhhhh
Q 014478 204 ALEGHFSNDEGTELVRLASRCLQSEARERPNAKSLVISLMSLQKEA 249 (424)
Q Consensus 204 ~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~~~~~l~~~~~~~ 249 (424)
......+..+++++.+++.+||..||.+|||+.+++++|+.+....
T Consensus 291 ~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~~ 336 (344)
T 1rjb_A 291 GFKMDQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFLGCQLADA 336 (344)
T ss_dssp TCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC---
T ss_pred CCCCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHHHH
Confidence 3444556677889999999999999999999999999999887653
|
| >2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-43 Score=329.79 Aligned_cols=232 Identities=17% Similarity=0.179 Sum_probs=187.7
Q ss_pred CCCcccceeee--ecceecccccCCCch---------------------------hhhHHHHHHHHHhcCCCcCcceeEE
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESSDL---------------------------GETLNLEEAKAVGNLRSERLANLIG 52 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~~~---------------------------~~~~~~~E~~~l~~l~h~~iv~~~~ 52 (424)
|+||.||.+.. .+..+++|++..... ..+.+.+|++++++++||||+++++
T Consensus 24 G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~ 103 (298)
T 2zv2_A 24 GSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILKKLDHPNVVKLVE 103 (298)
T ss_dssp --CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHHTCCCTTBCCEEE
T ss_pred cCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHHhCCCCCCCeEEE
Confidence 89999999976 567788887754321 2357889999999999999999999
Q ss_pred EEEe--CCeeeEEEecCCCCCHHhHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEc
Q 014478 53 CCYE--ADERLLVAEFMPNETLAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLS 130 (424)
Q Consensus 53 ~~~~--~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~ 130 (424)
++.. ....++||||+++++|.+++. ..++++.+++.++.||+.||.|||+++ |+||||||+|||++.++.+||+
T Consensus 104 ~~~~~~~~~~~lv~e~~~~~~l~~~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~~-ivH~Dlkp~Nil~~~~~~~kl~ 179 (298)
T 2zv2_A 104 VLDDPNEDHLYMVFELVNQGPVMEVPT---LKPLSEDQARFYFQDLIKGIEYLHYQK-IIHRDIKPSNLLVGEDGHIKIA 179 (298)
T ss_dssp EEECSSSSEEEEEEECCTTCBSCCSSC---SSCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEECTTSCEEEC
T ss_pred EEEcCCCCEEEEEEecCCCCcHHHHhh---cCCCCHHHHHHHHHHHHHHHHHHHHCC-eeccCCCHHHEEECCCCCEEEe
Confidence 9987 567899999999999988763 467999999999999999999999999 9999999999999999999999
Q ss_pred cccccccCCCC----CccccCccCCCccccccCC---CCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhc
Q 014478 131 SFGLMKNSRDG----KSYSTNLAFTPPEYMRTGR---VTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDS 203 (424)
Q Consensus 131 Dfg~~~~~~~~----~~~~gt~~y~aPE~~~~~~---~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~ 203 (424)
|||+++..... ....||+.|+|||++.+.. .+.++|||||||++|+|++|..||.......... .....
T Consensus 180 Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~----~~~~~ 255 (298)
T 2zv2_A 180 DFGVSNEFKGSDALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDERIMCLHS----KIKSQ 255 (298)
T ss_dssp CCTTCEECSSSSCEECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHH----HHHHC
T ss_pred cCCCccccccccccccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCccHHHHHH----HHhcc
Confidence 99999876543 2456899999999998654 4778999999999999999998887642221111 11112
Q ss_pred ccCCCCCchhHHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 014478 204 ALEGHFSNDEGTELVRLASRCLQSEARERPNAKSLVIS 241 (424)
Q Consensus 204 ~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~~~~~ 241 (424)
.........+++++.++|.+||+.||++|||+.+++++
T Consensus 256 ~~~~~~~~~~~~~l~~li~~~l~~dp~~R~s~~e~l~h 293 (298)
T 2zv2_A 256 ALEFPDQPDIAEDLKDLITRMLDKNPESRIVVPEIKLH 293 (298)
T ss_dssp CCCCCSSSCCCHHHHHHHHHHTCSCTTTSCCHHHHTTC
T ss_pred cCCCCCccccCHHHHHHHHHHhhcChhhCCCHHHHhcC
Confidence 22222334578899999999999999999999999865
|
| >3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-43 Score=326.31 Aligned_cols=243 Identities=18% Similarity=0.223 Sum_probs=200.4
Q ss_pred CCCcccceeeeecc-----eecccccCCCc--hhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCee-eEEEecCCCCCHH
Q 014478 2 GGRCSKFSICWFHC-----HLKSSVLESSD--LGETLNLEEAKAVGNLRSERLANLIGCCYEADER-LLVAEFMPNETLA 73 (424)
Q Consensus 2 G~~g~v~~~~~~~~-----~v~~~~~~~~~--~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~-~lv~e~~~~gsL~ 73 (424)
||||.||.+.+... .+++|++.... ...+.+.+|+.++++++||||+++++++...+.. ++||||+.+|+|.
T Consensus 32 G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v~e~~~~~~L~ 111 (298)
T 3pls_A 32 GHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHVLLPYMCHGDLL 111 (298)
T ss_dssp ETTEEEEEEEEECSSSCEEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEEECCCTTCBHH
T ss_pred CCCceEEEEEEecCCCceeeeeeeeccccccHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCCCCcEEEEecccCCCHH
Confidence 89999999987332 46667665433 3457889999999999999999999999876655 8999999999999
Q ss_pred hHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCC--------CCccc
Q 014478 74 KHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRD--------GKSYS 145 (424)
Q Consensus 74 ~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~--------~~~~~ 145 (424)
+++.. ....+++.+++.++.|++.||.|||+++ ++||||||+||+++.++.+||+|||+++.... .....
T Consensus 112 ~~~~~-~~~~~~~~~~~~i~~qi~~~l~~LH~~~-i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~ 189 (298)
T 3pls_A 112 QFIRS-PQRNPTVKDLISFGLQVARGMEYLAEQK-FVHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHRHAR 189 (298)
T ss_dssp HHHHC-TTCCCBHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEECTTCCEEECCTTSSCTTTTGGGGCSCCSSCTT
T ss_pred HHHhc-cccCCCHHHHHHHHHHHHHHHHHHHhCC-cccCCCCcceEEEcCCCcEEeCcCCCcccccCCcccccccCcCCC
Confidence 99965 4567899999999999999999999999 99999999999999999999999999975432 23345
Q ss_pred cCccCCCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHHHHHHHHHhc
Q 014478 146 TNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCL 225 (424)
Q Consensus 146 gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl 225 (424)
+|+.|+|||.+.+..++.++||||||+++|+|++|..|+... .........+........+..+++++.+++.+||
T Consensus 190 ~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l 265 (298)
T 3pls_A 190 LPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRH----IDPFDLTHFLAQGRRLPQPEYCPDSLYQVMQQCW 265 (298)
T ss_dssp CGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHTSCCTTTT----SCGGGHHHHHHTTCCCCCCTTCCHHHHHHHHHHT
T ss_pred CCccccChhhhccCCCChhhchhhHHHHHHHHhhCCCCCCcc----CCHHHHHHHhhcCCCCCCCccchHHHHHHHHHHc
Confidence 788999999999889999999999999999999977665433 1122222333333344456667889999999999
Q ss_pred ccCcCCCCCHHHHHHHHHHHhhhhh
Q 014478 226 QSEARERPNAKSLVISLMSLQKEAE 250 (424)
Q Consensus 226 ~~dp~~Rps~~~~~~~l~~~~~~~~ 250 (424)
+.||.+|||+.++++.|+++.+...
T Consensus 266 ~~~p~~Rps~~~ll~~l~~~~~~l~ 290 (298)
T 3pls_A 266 EADPAVRPTFRVLVGEVEQIVSALL 290 (298)
T ss_dssp CSSGGGSCCHHHHHHHHHHHHHHCC
T ss_pred cCChhhCcCHHHHHHHHHHHHHHHh
Confidence 9999999999999999999887643
|
| >3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus} | Back alignment and structure |
|---|
Probab=100.00 E-value=9e-44 Score=334.10 Aligned_cols=242 Identities=17% Similarity=0.230 Sum_probs=189.9
Q ss_pred CCCcccceeeeecc-----eecccccCCC---chhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCee------eEEEecC
Q 014478 2 GGRCSKFSICWFHC-----HLKSSVLESS---DLGETLNLEEAKAVGNLRSERLANLIGCCYEADER------LLVAEFM 67 (424)
Q Consensus 2 G~~g~v~~~~~~~~-----~v~~~~~~~~---~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~------~lv~e~~ 67 (424)
|++|.||.+.+... .|++|++... ....+.+.+|++++++++||||+++++++...... ++||||+
T Consensus 34 G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~v~e~~ 113 (323)
T 3qup_A 34 GEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRAKGRLPIPMVILPFM 113 (323)
T ss_dssp ETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEECC-------CEEEEEECC
T ss_pred cCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCceehhhceeeccccccCCCccEEEEEec
Confidence 89999999987433 5777877543 34467899999999999999999999999877654 8999999
Q ss_pred CCCCHHhHhccC----CCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCC--
Q 014478 68 PNETLAKHLFHW----ETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG-- 141 (424)
Q Consensus 68 ~~gsL~~~l~~~----~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~-- 141 (424)
++|+|.+++... ....+++.+++.++.|++.||.|||+++ ++||||||+|||++.++.+||+|||+++.....
T Consensus 114 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~-ivH~Dikp~NIli~~~~~~kl~Dfg~a~~~~~~~~ 192 (323)
T 3qup_A 114 KHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSRN-FIHRDLAARNCMLAEDMTVCVADFGLSRKIYSGDY 192 (323)
T ss_dssp TTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEECTTSCEEECCCCC---------
T ss_pred cCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHcCC-cccCCCCcceEEEcCCCCEEEeecccccccccccc
Confidence 999999998532 1226899999999999999999999999 999999999999999999999999999865432
Q ss_pred ----CccccCccCCCccccccCCCCCCcceehhHHHHHHHhh-CCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHH
Q 014478 142 ----KSYSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTE 216 (424)
Q Consensus 142 ----~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (424)
....+|+.|+|||.+.+..++.++|||||||++|+|++ |..||..... ......+........+..++++
T Consensus 193 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~ 267 (323)
T 3qup_A 193 YRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIEN-----AEIYNYLIGGNRLKQPPECMEE 267 (323)
T ss_dssp --------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCG-----GGHHHHHHTTCCCCCCTTCCHH
T ss_pred ccccccccCcccccCchhhcCCCCCCccchhhHHHHHHHHHhCCCCCccccCh-----HHHHHHHhcCCCCCCCCccCHH
Confidence 23346778999999998899999999999999999999 8877765321 1222222223334456677889
Q ss_pred HHHHHHHhcccCcCCCCCHHHHHHHHHHHhhhh
Q 014478 217 LVRLASRCLQSEARERPNAKSLVISLMSLQKEA 249 (424)
Q Consensus 217 l~~li~~cl~~dp~~Rps~~~~~~~l~~~~~~~ 249 (424)
+.+++.+||+.||++|||+.++++.|+.+....
T Consensus 268 l~~li~~~l~~dp~~Rps~~~l~~~l~~~l~~~ 300 (323)
T 3qup_A 268 VYDLMYQCWSADPKQRPSFTCLRMELENILGHL 300 (323)
T ss_dssp HHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHC-
T ss_pred HHHHHHHHccCChhhCcCHHHHHHHHHHHHHHh
Confidence 999999999999999999999999999998763
|
| >1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=9.7e-44 Score=326.82 Aligned_cols=241 Identities=20% Similarity=0.286 Sum_probs=202.0
Q ss_pred CCCcccceeeeec-ceecccccCCCchhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHhHhccCC
Q 014478 2 GGRCSKFSICWFH-CHLKSSVLESSDLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWE 80 (424)
Q Consensus 2 G~~g~v~~~~~~~-~~v~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~ 80 (424)
|++|.||.+.+.+ ..+++|++.......+.+.+|++++++++||||+++++++.. +..++||||+++++|.+++....
T Consensus 24 G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~v~e~~~~~~L~~~l~~~~ 102 (279)
T 1qpc_A 24 GQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTPS 102 (279)
T ss_dssp ETTEEEEEEEETTTEEEEEEEECTTSSCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEEECCTTCBHHHHTTSHH
T ss_pred CCCeEEEEEEEcCCcEEEEEEecCCcccHHHHHHHHHHHHhCCCcCcceEEEEEcC-CCcEEEEecCCCCCHHHHHhcCC
Confidence 8999999998854 468888887766667889999999999999999999999874 45899999999999999996432
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCC-----CccccCccCCCccc
Q 014478 81 TQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG-----KSYSTNLAFTPPEY 155 (424)
Q Consensus 81 ~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~-----~~~~gt~~y~aPE~ 155 (424)
+..+++.+++.++.|++.||.|||+++ ++||||||+||+++.++.+||+|||++...... ....++..|+|||+
T Consensus 103 ~~~~~~~~~~~i~~qi~~~l~~lH~~~-i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~ 181 (279)
T 1qpc_A 103 GIKLTINKLLDMAAQIAEGMAFIEERN-YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEA 181 (279)
T ss_dssp HHTCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEECTTSCEEECCCTTCEECSSSCEECCTTCCCCTTTSCHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHCC-eeccCCCHhhEEEcCCCCEEECCCcccccccCcccccccCCCCccCccChhh
Confidence 337999999999999999999999999 999999999999999999999999999876533 22346788999999
Q ss_pred cccCCCCCCcceehhHHHHHHHhh-CCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHHHHHHHHHhcccCcCCCCC
Q 014478 156 MRTGRVTPESVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERPN 234 (424)
Q Consensus 156 ~~~~~~~~~~Dv~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps 234 (424)
+.++.++.++||||||+++|+|++ |..||...... .....+........+..+++++.+++.+||..||++|||
T Consensus 182 ~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps 256 (279)
T 1qpc_A 182 INYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNP-----EVIQNLERGYRMVRPDNCPEELYQLMRLCWKERPEDRPT 256 (279)
T ss_dssp HHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHH-----HHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCC
T ss_pred hccCCCCchhhhHHHHHHHHHHHhCCCCCCcccCHH-----HHHHHHhcccCCCCcccccHHHHHHHHHHhccChhhCCC
Confidence 998889999999999999999999 88777653221 112222223334455677889999999999999999999
Q ss_pred HHHHHHHHHHHhhhh
Q 014478 235 AKSLVISLMSLQKEA 249 (424)
Q Consensus 235 ~~~~~~~l~~~~~~~ 249 (424)
+.++++.|+.+....
T Consensus 257 ~~~l~~~l~~~~~~~ 271 (279)
T 1qpc_A 257 FDYLRSVLEDFFTAT 271 (279)
T ss_dssp HHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHhc
Confidence 999999999887653
|
| >1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.8e-44 Score=337.10 Aligned_cols=235 Identities=17% Similarity=0.177 Sum_probs=196.7
Q ss_pred CCCcccceeee--ecceecccccCCCc----hhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHhH
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESSD----LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKH 75 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~~----~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~ 75 (424)
|+||.||.+.. .+..|++|++.... ...+.+.+|++++++++||||+++++++..++..++||||++ |+|.++
T Consensus 65 G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~-g~l~~~ 143 (348)
T 1u5q_A 65 GSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYCL-GSASDL 143 (348)
T ss_dssp CSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCS-EEHHHH
T ss_pred CCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCeEEEEEecCC-CCHHHH
Confidence 89999999986 57778888775332 234678899999999999999999999999999999999997 588888
Q ss_pred hccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCCCccccCccCCCccc
Q 014478 76 LFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLAFTPPEY 155 (424)
Q Consensus 76 l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~gt~~y~aPE~ 155 (424)
+.. ...++++.+++.++.|++.||.|||+++ |+||||||+|||++.++.+||+|||+++.........||+.|+|||+
T Consensus 144 l~~-~~~~l~~~~~~~i~~qi~~aL~~LH~~~-ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~gt~~y~aPE~ 221 (348)
T 1u5q_A 144 LEV-HKKPLQEVEIAAVTHGALQGLAYLHSHN-MIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANSFVGTPYWMAPEV 221 (348)
T ss_dssp HHH-HTSCCCHHHHHHHHHHHHHHHHHHHHTT-CBCCCCSGGGEEEETTTEEEECCCTTCBSSSSBCCCCSCGGGCCHHH
T ss_pred HHH-hcCCCCHHHHHHHHHHHHHHHHHHHhCC-eeeCCCCHHHEEECCCCCEEEeeccCceecCCCCcccCCcceeCHhh
Confidence 753 3467999999999999999999999999 99999999999999999999999999988777777889999999999
Q ss_pred cc---cCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHHHHHHHHHhcccCcCCC
Q 014478 156 MR---TGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARER 232 (424)
Q Consensus 156 ~~---~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~R 232 (424)
+. .+.++.++|||||||++|||++|..||....... ..............+..+++.+.++|.+||+.||++|
T Consensus 222 ~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~R 297 (348)
T 1u5q_A 222 ILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMS----ALYHIAQNESPALQSGHWSEYFRNFVDSCLQKIPQDR 297 (348)
T ss_dssp HHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHH----HHHHHHHSCCCCCCCTTSCHHHHHHHHHHTCSSGGGS
T ss_pred hccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHH----HHHHHHhcCCCCCCCCCCCHHHHHHHHHHcccChhhC
Confidence 85 4678999999999999999999998876542111 1112222222233345678899999999999999999
Q ss_pred CCHHHHHHHHH
Q 014478 233 PNAKSLVISLM 243 (424)
Q Consensus 233 ps~~~~~~~l~ 243 (424)
||+++++++..
T Consensus 298 ps~~~ll~h~~ 308 (348)
T 1u5q_A 298 PTSEVLLKHRF 308 (348)
T ss_dssp CCHHHHTTCHH
T ss_pred cCHHHHhhChh
Confidence 99999987654
|
| >2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-43 Score=337.01 Aligned_cols=235 Identities=14% Similarity=0.189 Sum_probs=194.9
Q ss_pred CCCcccceeee--ecceecccccCCCc---hhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHhHh
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESSD---LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHL 76 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~~---~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~l 76 (424)
|+||.||.+.+ .+..+++|++.... ...+.+.+|+++++.++||||+++++++.+.+..++||||++||+|.+++
T Consensus 40 G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~e~~~gg~L~~~l 119 (362)
T 2bdw_A 40 GAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDI 119 (362)
T ss_dssp ETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHH
T ss_pred CCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEecCCCCCHHHHH
Confidence 89999999987 46778888875433 34567889999999999999999999999999999999999999999998
Q ss_pred ccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCC---CCeEEccccccccCCCCC---ccccCccC
Q 014478 77 FHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKD---GNPRLSSFGLMKNSRDGK---SYSTNLAF 150 (424)
Q Consensus 77 ~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~---~~~kl~Dfg~~~~~~~~~---~~~gt~~y 150 (424)
.. ...+++.++..++.||+.||.|||+++ |+||||||+|||++.+ +.+||+|||+++...... ...||+.|
T Consensus 120 ~~--~~~~~~~~~~~~~~qi~~al~~lH~~~-ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a~~~~~~~~~~~~~gt~~y 196 (362)
T 2bdw_A 120 VA--REFYSEADASHCIQQILESIAYCHSNG-IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGY 196 (362)
T ss_dssp TT--CSCCCHHHHHHHHHHHHHHHHHHHHTT-CBCCCCSGGGEEESCSSTTCCEEECCCTTCBCCTTCCSCCCSCSCTTT
T ss_pred HH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-eEeccCchHHEEEecCCCCCCEEEeecCcceEecCCcccccCCCCccc
Confidence 64 467999999999999999999999999 9999999999999765 459999999998765432 35789999
Q ss_pred CCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhcccC--CCCCchhHHHHHHHHHHhcccC
Q 014478 151 TPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALE--GHFSNDEGTELVRLASRCLQSE 228 (424)
Q Consensus 151 ~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~li~~cl~~d 228 (424)
+|||++.+..++.++|||||||++|+|++|..||........ ...+...... ......+++++.+||.+||+.|
T Consensus 197 ~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~----~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~d 272 (362)
T 2bdw_A 197 LSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRL----YAQIKAGAYDYPSPEWDTVTPEAKSLIDSMLTVN 272 (362)
T ss_dssp CCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH----HHHHHHTCCCCCTTGGGGSCHHHHHHHHHHSCSS
T ss_pred cCHHHHccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHH----HHHHHhCCCCCCcccccCCCHHHHHHHHHHcCCC
Confidence 999999988899999999999999999999988876422211 1111111111 1112356889999999999999
Q ss_pred cCCCCCHHHHHHHHH
Q 014478 229 ARERPNAKSLVISLM 243 (424)
Q Consensus 229 p~~Rps~~~~~~~l~ 243 (424)
|++|||+.+++++-.
T Consensus 273 P~~R~t~~e~l~hp~ 287 (362)
T 2bdw_A 273 PKKRITADQALKVPW 287 (362)
T ss_dssp GGGSCCHHHHTTSHH
T ss_pred hhhCcCHHHHhcCcc
Confidence 999999999997643
|
| >1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.4e-44 Score=327.44 Aligned_cols=240 Identities=21% Similarity=0.311 Sum_probs=195.4
Q ss_pred CCCcccceeeeecceecccccCCCchhhhHHHHHHHHHhcCCCcCcceeEEEEEeC-CeeeEEEecCCCCCHHhHhccCC
Q 014478 2 GGRCSKFSICWFHCHLKSSVLESSDLGETLNLEEAKAVGNLRSERLANLIGCCYEA-DERLLVAEFMPNETLAKHLFHWE 80 (424)
Q Consensus 2 G~~g~v~~~~~~~~~v~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~-~~~~lv~e~~~~gsL~~~l~~~~ 80 (424)
|++|.||.+.+.+..+++|++.... ..+.+.+|++++++++||||+++++++... +..++||||+++|+|.+++....
T Consensus 32 G~~g~V~~~~~~~~~vavK~~~~~~-~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~ 110 (278)
T 1byg_A 32 GEFGDVMLGDYRGNKVAVKCIKNDA-TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRG 110 (278)
T ss_dssp CSSCEEEEEEETTEEEEEEECCCCC---HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEECCCTTEEHHHHHHHHH
T ss_pred CCCceEEEEEEcCCEEEEEEecchh-HHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCCceEEEEecCCCCCHHHHHHhcc
Confidence 8999999999998889988886554 457899999999999999999999997654 46899999999999999996532
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCC-CccccCccCCCccccccC
Q 014478 81 TQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG-KSYSTNLAFTPPEYMRTG 159 (424)
Q Consensus 81 ~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~-~~~~gt~~y~aPE~~~~~ 159 (424)
...+++..++.++.|++.||.|||+++ ++||||||+||+++.++.+||+|||++...... ....+++.|+|||.+.+.
T Consensus 111 ~~~~~~~~~~~~~~~i~~~l~~lH~~~-i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~y~aPE~~~~~ 189 (278)
T 1byg_A 111 RSVLGGDCLLKFSLDVCEAMEYLEGNN-FVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWTAPEALREK 189 (278)
T ss_dssp HHHCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEECTTSCEEECCCCC------------CCTTTSCHHHHHHC
T ss_pred cccCCHHHHHHHHHHHHHHHHHHHhCC-ccccCCCcceEEEeCCCcEEEeeccccccccccccCCCccccccCHHHhCCC
Confidence 334899999999999999999999999 999999999999999999999999998765433 334578899999999988
Q ss_pred CCCCCcceehhHHHHHHHhh-CCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHHHHHHHHHhcccCcCCCCCHHHH
Q 014478 160 RVTPESVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERPNAKSL 238 (424)
Q Consensus 160 ~~~~~~Dv~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~~ 238 (424)
.++.++||||||+++|+|++ |..||..... ......+........+..+++++.+++.+||+.||++|||+.++
T Consensus 190 ~~~~~~Di~slG~il~~l~t~g~~p~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l 264 (278)
T 1byg_A 190 KFSTKSDVWSFGILLWEIYSFGRVPYPRIPL-----KDVVPRVEKGYKMDAPDGCPPAVYEVMKNCWHLDAAMRPSFLQL 264 (278)
T ss_dssp CCCHHHHHHHHHHHHHHHHTTSCCSCTTSCG-----GGHHHHHTTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred CCCchhcHHHHHHHHHHHHhCCCCCCCCCCH-----HHHHHHHhcCCCCCCcccCCHHHHHHHHHHhcCChhhCCCHHHH
Confidence 89999999999999999998 8877765321 11222222333445566788999999999999999999999999
Q ss_pred HHHHHHHhhh
Q 014478 239 VISLMSLQKE 248 (424)
Q Consensus 239 ~~~l~~~~~~ 248 (424)
++.|+.+...
T Consensus 265 ~~~L~~i~~~ 274 (278)
T 1byg_A 265 REQLEHIKTH 274 (278)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHhh
Confidence 9999988754
|
| >1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-43 Score=329.65 Aligned_cols=231 Identities=18% Similarity=0.212 Sum_probs=196.9
Q ss_pred CCCcccceeee--ecceecccccCCCc----hhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHhH
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESSD----LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKH 75 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~~----~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~ 75 (424)
|++|.||.+.. .+..+++|++.... ...+.+.+|+.+++.++||||+++++++.+....++||||++||+|.++
T Consensus 17 G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv~e~~~gg~L~~~ 96 (318)
T 1fot_A 17 GSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMIMDYIEGGELFSL 96 (318)
T ss_dssp CSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEEECCCCSCBHHHH
T ss_pred CCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEeCCEEEEEEeCCCCCCHHHH
Confidence 89999999987 56778888775432 2346778899999999999999999999999999999999999999999
Q ss_pred hccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCC-CccccCccCCCcc
Q 014478 76 LFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG-KSYSTNLAFTPPE 154 (424)
Q Consensus 76 l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~-~~~~gt~~y~aPE 154 (424)
+.. ...+++..+..++.||+.||.|||+++ |+||||||+|||++.+|.+||+|||+++..... ....||+.|+|||
T Consensus 97 l~~--~~~~~~~~~~~~~~qi~~aL~~LH~~~-ivHrDlkp~NIll~~~g~~kL~Dfg~a~~~~~~~~~~~gt~~y~aPE 173 (318)
T 1fot_A 97 LRK--SQRFPNPVAKFYAAEVCLALEYLHSKD-IIYRDLKPENILLDKNGHIKITDFGFAKYVPDVTYTLCGTPDYIAPE 173 (318)
T ss_dssp HHH--TSSCCHHHHHHHHHHHHHHHHHHHTTT-EECCCCCGGGEEECTTSCEEECCCSSCEECSSCBCCCCSCTTTCCHH
T ss_pred HHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-ccccCCChheEEEcCCCCEEEeecCcceecCCccccccCCccccCHh
Confidence 975 457999999999999999999999999 999999999999999999999999999876543 3567999999999
Q ss_pred ccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHHHHHHHHHhcccCcCCCC-
Q 014478 155 YMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERP- 233 (424)
Q Consensus 155 ~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rp- 233 (424)
++.+..++.++|||||||++|||++|..||....... ....+.... ..+|..+++++.++|.+||..||++||
T Consensus 174 ~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~----~~~~i~~~~--~~~p~~~~~~~~~li~~lL~~dp~~R~~ 247 (318)
T 1fot_A 174 VVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMK----TYEKILNAE--LRFPPFFNEDVKDLLSRLITRDLSQRLG 247 (318)
T ss_dssp HHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHH----HHHHHHHCC--CCCCTTSCHHHHHHHHHHTCSCTTTCTT
T ss_pred HhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHH----HHHHHHhCC--CCCCCCCCHHHHHHHHHHhccCHHHcCC
Confidence 9998899999999999999999999998887642211 111222221 235566788999999999999999999
Q ss_pred ----CHHHHHHH
Q 014478 234 ----NAKSLVIS 241 (424)
Q Consensus 234 ----s~~~~~~~ 241 (424)
+++++++|
T Consensus 248 ~~~~~~~~i~~h 259 (318)
T 1fot_A 248 NLQNGTEDVKNH 259 (318)
T ss_dssp SSTTTTHHHHTS
T ss_pred CcCCCHHHHhcC
Confidence 88998865
|
| >2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-43 Score=356.73 Aligned_cols=241 Identities=18% Similarity=0.246 Sum_probs=201.9
Q ss_pred CCCcccceeeee----cceecccccCCCc--hhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHhH
Q 014478 2 GGRCSKFSICWF----HCHLKSSVLESSD--LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKH 75 (424)
Q Consensus 2 G~~g~v~~~~~~----~~~v~~~~~~~~~--~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~ 75 (424)
|+||.||.+.+. +..|++|++.... ...+.|.+|+++|++++||||++++++|.. +..++||||+++|+|.++
T Consensus 347 G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~-~~~~lv~E~~~~g~L~~~ 425 (613)
T 2ozo_A 347 GNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALMLVMEMAGGGPLHKF 425 (613)
T ss_dssp CSSSEEEEEEEECSSCEEEEEEEECCCCCSSTTHHHHHHHHHHHTTCCCTTBCCEEEEEES-SSEEEEEECCTTCBHHHH
T ss_pred CCCcEEEEEEEecCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEecc-CCeEEEEEeCCCCcHHHH
Confidence 899999999884 3457888876532 346789999999999999999999999976 568999999999999999
Q ss_pred hccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCCC-------ccccCc
Q 014478 76 LFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGK-------SYSTNL 148 (424)
Q Consensus 76 l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~~-------~~~gt~ 148 (424)
+.. ....+++.+++.++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++...... ...+|+
T Consensus 426 l~~-~~~~l~~~~~~~i~~qi~~~L~~LH~~~-iiHrDlkp~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~ 503 (613)
T 2ozo_A 426 LVG-KREEIPVSNVAELLHQVSMGMKYLEEKN-FVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPL 503 (613)
T ss_dssp HTT-CTTTSCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEEEETTEEEECCCSTTTTCC--------------CC
T ss_pred Hhh-ccCCCCHHHHHHHHHHHHHHHHHHHHCC-EEcCcCCHHHEEEcCCCcEEEeeccCcccccCCCceeeeccCCCCcc
Confidence 965 3567999999999999999999999999 9999999999999999999999999998764321 123468
Q ss_pred cCCCccccccCCCCCCcceehhHHHHHHHhh-CCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHHHHHHHHHhccc
Q 014478 149 AFTPPEYMRTGRVTPESVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQS 227 (424)
Q Consensus 149 ~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~ 227 (424)
.|+|||++.++.++.++|||||||++|||++ |..||.... .......+........+..+++++.++|.+||..
T Consensus 504 ~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~-----~~~~~~~i~~~~~~~~p~~~~~~l~~li~~cl~~ 578 (613)
T 2ozo_A 504 KWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMK-----GPEVMAFIEQGKRMECPPECPPELYALMSDCWIY 578 (613)
T ss_dssp TTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCC-----SHHHHHHHHTTCCCCCCTTCCHHHHHHHHHTTCS
T ss_pred ceeCHhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCC-----HHHHHHHHHcCCCCCCCCcCCHHHHHHHHHHcCC
Confidence 8999999998899999999999999999998 998887642 2223333344445566778899999999999999
Q ss_pred CcCCCCCHHHHHHHHHHHhhhhh
Q 014478 228 EARERPNAKSLVISLMSLQKEAE 250 (424)
Q Consensus 228 dp~~Rps~~~~~~~l~~~~~~~~ 250 (424)
||++|||+.++++.|+.+.....
T Consensus 579 dP~~RPs~~~l~~~L~~~~~~~~ 601 (613)
T 2ozo_A 579 KWEDRPDFLTVEQRMRACYYSLA 601 (613)
T ss_dssp STTTSCCHHHHHHHHHHHHHHHS
T ss_pred ChhHCcCHHHHHHHHHHHHHHhc
Confidence 99999999999999998876543
|
| >2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=4.5e-44 Score=357.88 Aligned_cols=240 Identities=23% Similarity=0.301 Sum_probs=204.3
Q ss_pred CCCcccceeeeec-ceecccccCCCchhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHhHhccCC
Q 014478 2 GGRCSKFSICWFH-CHLKSSVLESSDLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWE 80 (424)
Q Consensus 2 G~~g~v~~~~~~~-~~v~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~ 80 (424)
|+||.||.+.+.+ ..|++|++.......+.|.+|+++|++++||||+++++++.+ +..+|||||+++|+|.+++....
T Consensus 278 G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~-~~~~lv~e~~~~gsL~~~l~~~~ 356 (535)
T 2h8h_A 278 GCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLKGET 356 (535)
T ss_dssp CSSEEEEEEEETTTEEEEEEEECTTSSCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEECCCTTEEHHHHHSHHH
T ss_pred CCCeEEEEEEECCCceEEEEEeCCCCCCHHHHHHHHHHHHhCCCCCEeeEEEEEee-ccceEeeehhcCCcHHHHHhhcC
Confidence 8999999999854 568888887766667889999999999999999999999876 66899999999999999996533
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCC-----CccccCccCCCccc
Q 014478 81 TQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG-----KSYSTNLAFTPPEY 155 (424)
Q Consensus 81 ~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~-----~~~~gt~~y~aPE~ 155 (424)
+..+++.+++.++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++..... ....++..|+|||+
T Consensus 357 ~~~l~~~~~~~i~~qi~~~L~~LH~~~-ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~y~aPE~ 435 (535)
T 2h8h_A 357 GKYLRLPQLVDMAAQIASGMAYVERMN-YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEA 435 (535)
T ss_dssp HTTCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEECGGGCEEECCTTSTTTCCCHHHHTTCSTTSCGGGSCHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHhCC-eeCCCCCHhhEEEcCCCcEEEcccccceecCCCceecccCCcCcccccCHHH
Confidence 456999999999999999999999999 999999999999999999999999999876532 23346788999999
Q ss_pred cccCCCCCCcceehhHHHHHHHhh-CCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHHHHHHHHHhcccCcCCCCC
Q 014478 156 MRTGRVTPESVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERPN 234 (424)
Q Consensus 156 ~~~~~~~~~~Dv~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps 234 (424)
+.++.++.++|||||||++|||++ |..||...... .....+........+..++.++.+||.+||+.||++|||
T Consensus 436 ~~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~~~~~-----~~~~~i~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt 510 (535)
T 2h8h_A 436 ALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNR-----EVLDQVERGYRMPCPPECPESLHDLMCQCWRKEPEERPT 510 (535)
T ss_dssp HHHCCCCHHHHHHHHHHHHHHHTTTTCCSSTTCCHH-----HHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCC
T ss_pred hccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHH-----HHHHHHHcCCCCCCCCCCCHHHHHHHHHHcCCChhHCcC
Confidence 998899999999999999999999 88787654221 222223333444566778899999999999999999999
Q ss_pred HHHHHHHHHHHhhh
Q 014478 235 AKSLVISLMSLQKE 248 (424)
Q Consensus 235 ~~~~~~~l~~~~~~ 248 (424)
+++|++.|+.+...
T Consensus 511 ~~~l~~~L~~~~~~ 524 (535)
T 2h8h_A 511 FEYLQAFLEDYFTS 524 (535)
T ss_dssp HHHHHHHHHTSSCC
T ss_pred HHHHHHHHHHHhhc
Confidence 99999999887643
|
| >3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-43 Score=338.07 Aligned_cols=241 Identities=18% Similarity=0.244 Sum_probs=189.7
Q ss_pred CCCcccceeeeec-----ceecccccCCC--chhhhHHHHHHHHHhcCCCcCcceeEEEEEe-CCeeeEEEecCCCCCHH
Q 014478 2 GGRCSKFSICWFH-----CHLKSSVLESS--DLGETLNLEEAKAVGNLRSERLANLIGCCYE-ADERLLVAEFMPNETLA 73 (424)
Q Consensus 2 G~~g~v~~~~~~~-----~~v~~~~~~~~--~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-~~~~~lv~e~~~~gsL~ 73 (424)
|+||.||++.+.. ..+++|.+... ....+.|.+|+.++++++||||++++++|.. ++..++||||+++|+|.
T Consensus 100 G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~lv~e~~~~g~L~ 179 (373)
T 3c1x_A 100 GHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLR 179 (373)
T ss_dssp CSSSEEEEEEEEETTTEEEEEEEEECCSCSCSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCSSCCEEEEECCTTCBHH
T ss_pred CCCeEEEEEEEECCCCcEEEEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCCCeEEEEECCCCCCHH
Confidence 8999999998743 24666766432 2446789999999999999999999999765 45788999999999999
Q ss_pred hHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCC--------Cccc
Q 014478 74 KHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG--------KSYS 145 (424)
Q Consensus 74 ~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~--------~~~~ 145 (424)
+++.. ....+++.+++.++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++..... ....
T Consensus 180 ~~l~~-~~~~~~~~~~~~i~~qi~~aL~~LH~~~-ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~~ 257 (373)
T 3c1x_A 180 NFIRN-ETHNPTVKDLIGFGLQVAKGMKFLASKK-FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAK 257 (373)
T ss_dssp HHHHC-TTCCCBHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEECTTCCEEECCC---------------------
T ss_pred HHHhh-cccCCCHHHHHHHHHHHHHHHHHHHHCC-EecCccchheEEECCCCCEEEeeccccccccccccccccccCCCC
Confidence 99965 4557899999999999999999999999 999999999999999999999999999865322 2234
Q ss_pred cCccCCCccccccCCCCCCcceehhHHHHHHHhhC-CCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHHHHHHHHHh
Q 014478 146 TNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSG-KHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRC 224 (424)
Q Consensus 146 gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c 224 (424)
+|+.|+|||++.+..++.++|||||||++|||++| ..||.... .......+........+..++..+.+++.+|
T Consensus 258 ~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~~~~p~~~~~-----~~~~~~~~~~~~~~~~p~~~~~~l~~li~~c 332 (373)
T 3c1x_A 258 LPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVN-----TFDITVYLLQGRRLLQPEYCPDPLYEVMLKC 332 (373)
T ss_dssp CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSC-----SSCHHHHHHTTCCCCCCTTCCHHHHHHHHHH
T ss_pred CcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhCcCCCCCCCC-----HHHHHHHHHcCCCCCCCCCCCHHHHHHHHHH
Confidence 67889999999988999999999999999999994 54544321 1111222222233344566788999999999
Q ss_pred cccCcCCCCCHHHHHHHHHHHhhhh
Q 014478 225 LQSEARERPNAKSLVISLMSLQKEA 249 (424)
Q Consensus 225 l~~dp~~Rps~~~~~~~l~~~~~~~ 249 (424)
|+.||++|||+.++++.|+.+....
T Consensus 333 l~~dp~~RPs~~ell~~L~~i~~~~ 357 (373)
T 3c1x_A 333 WHPKAEMRPSFSELVSRISAIFSTF 357 (373)
T ss_dssp TCSSGGGSCCHHHHHHHHHHHHHTC
T ss_pred cCCChhhCcCHHHHHHHHHHHHHhc
Confidence 9999999999999999999988753
|
| >4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.3e-43 Score=328.88 Aligned_cols=244 Identities=12% Similarity=0.129 Sum_probs=196.4
Q ss_pred CCCcccceeeee--cceecccccCCCc--hhhhHHHHHHHHHhcCCCcCcceeEEEEEeCC--eeeEEEecCCCCCHHhH
Q 014478 2 GGRCSKFSICWF--HCHLKSSVLESSD--LGETLNLEEAKAVGNLRSERLANLIGCCYEAD--ERLLVAEFMPNETLAKH 75 (424)
Q Consensus 2 G~~g~v~~~~~~--~~~v~~~~~~~~~--~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~--~~~lv~e~~~~gsL~~~ 75 (424)
|+||.||.+.+. +..|++|++.... ...+.+.+|++++++++||||+++++++.... ..++||||+++|+|.++
T Consensus 20 G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~L~~~ 99 (319)
T 4euu_A 20 GATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTV 99 (319)
T ss_dssp CSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEEECCTTCBHHHH
T ss_pred CCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCcceEEEEeecCCCceEEEEEeCCCCCCHHHH
Confidence 899999999984 6778888876433 33577889999999999999999999998765 67899999999999999
Q ss_pred hccCC-CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeee----cCCCCeEEccccccccCCCCC---ccccC
Q 014478 76 LFHWE-TQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILF----DKDGNPRLSSFGLMKNSRDGK---SYSTN 147 (424)
Q Consensus 76 l~~~~-~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill----~~~~~~kl~Dfg~~~~~~~~~---~~~gt 147 (424)
+.... ...+++.+++.++.||+.||.|||+++ |+||||||+|||+ +.++.+||+|||+++...... ...||
T Consensus 100 l~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~-ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg~a~~~~~~~~~~~~~gt 178 (319)
T 4euu_A 100 LEEPSNAYGLPESEFLIVLRDVVGGMNHLRENG-IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVSLYGT 178 (319)
T ss_dssp HHSGGGTTCCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEEEECTTSCEEEEECCCTTCEECCTTCCBCCCCSC
T ss_pred HHHhccccCCCHHHHHHHHHHHHHHHHHHHHCC-EecCCCCHHHEEEeccCCCCceEEEccCCCceecCCCCceeecccC
Confidence 96532 234999999999999999999999999 9999999999999 777789999999998765432 45689
Q ss_pred ccCCCccccc--------cCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhcc---------------
Q 014478 148 LAFTPPEYMR--------TGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSA--------------- 204 (424)
Q Consensus 148 ~~y~aPE~~~--------~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~--------------- 204 (424)
+.|+|||++. +..++.++|||||||++|||++|..||....................
T Consensus 179 ~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~ 258 (319)
T 4euu_A 179 EEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGKPSGAISGVQKAENGP 258 (319)
T ss_dssp GGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECTTCGGGCHHHHHHHHHHCCTTCCEEEECSTTCC
T ss_pred CCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCccchhHHHHHHHhcCCCcccchhhhcccCCc
Confidence 9999999986 46789999999999999999999988753211111111111111111
Q ss_pred --------cCCCCCchhHHHHHHHHHHhcccCcCCCCCHHHHHHHHHHHh
Q 014478 205 --------LEGHFSNDEGTELVRLASRCLQSEARERPNAKSLVISLMSLQ 246 (424)
Q Consensus 205 --------~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~~~~~l~~~~ 246 (424)
.....+..++..+.+++.+||+.||++|||+++++++.....
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R~s~~ell~h~~d~~ 308 (319)
T 4euu_A 259 IDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDIL 308 (319)
T ss_dssp EEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHT
T ss_pred cccCccCCcccccchhHHHHhHHHHHHhccCChhhhccHHHhhhccHHHh
Confidence 111334567889999999999999999999999999987643
|
| >3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-43 Score=324.38 Aligned_cols=239 Identities=20% Similarity=0.236 Sum_probs=197.1
Q ss_pred CCCcccceeeeecc-----eecccccCCC--chhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHh
Q 014478 2 GGRCSKFSICWFHC-----HLKSSVLESS--DLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAK 74 (424)
Q Consensus 2 G~~g~v~~~~~~~~-----~v~~~~~~~~--~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~ 74 (424)
|++|.||.+.+... .+++|++... ....+.+.+|+++++.++||||+++++++.++ ..++||||+++++|.+
T Consensus 23 G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~-~~~~v~e~~~~~~L~~ 101 (281)
T 3cc6_A 23 GFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEEE-PTWIIMELYPYGELGH 101 (281)
T ss_dssp CSSSEEEEEEEECTTCCEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHCCTTBCCEEEEECSS-SCEEEEECCTTCBHHH
T ss_pred cCCeeEEEeEEcCCCCCcceEEEEecccccCchHHHHHHHHHHHHHhCCCCCcceEEEEEcCC-CCEEEEecCCCCCHHH
Confidence 89999999987542 3777776543 34567899999999999999999999998754 5789999999999999
Q ss_pred HhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCC-----CccccCcc
Q 014478 75 HLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG-----KSYSTNLA 149 (424)
Q Consensus 75 ~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~-----~~~~gt~~ 149 (424)
++.. ....+++..++.++.|++.||.|||+++ ++||||||+||+++.++.+||+|||++...... ....+|+.
T Consensus 102 ~l~~-~~~~~~~~~~~~~~~~i~~~l~~lH~~~-i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~ 179 (281)
T 3cc6_A 102 YLER-NKNSLKVLTLVLYSLQICKAMAYLESIN-CVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIK 179 (281)
T ss_dssp HHHH-HTTTCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCSGGGEEEEETTEEEECCCCGGGCC---------CCCCCGG
T ss_pred HHHh-ccccCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCccceEEECCCCcEEeCccCCCcccccccccccccCCCCcc
Confidence 9965 3456999999999999999999999999 999999999999999999999999999865533 23356788
Q ss_pred CCCccccccCCCCCCcceehhHHHHHHHhh-CCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHHHHHHHHHhcccC
Q 014478 150 FTPPEYMRTGRVTPESVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSE 228 (424)
Q Consensus 150 y~aPE~~~~~~~~~~~Dv~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~d 228 (424)
|+|||++.+..++.++||||||+++|+|++ |+.||...... .....+........+..+++.+.+++.+||..|
T Consensus 180 y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~p~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~ 254 (281)
T 3cc6_A 180 WMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENK-----DVIGVLEKGDRLPKPDLCPPVLYTLMTRCWDYD 254 (281)
T ss_dssp GCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCGG-----GHHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSS
T ss_pred eeCchhhccCCCCchhccHHHHHHHHHHHhCCCCCcccCChH-----HHHHHHhcCCCCCCCCCCCHHHHHHHHHHccCC
Confidence 999999998889999999999999999998 99887653211 122222222333455667889999999999999
Q ss_pred cCCCCCHHHHHHHHHHHhhh
Q 014478 229 ARERPNAKSLVISLMSLQKE 248 (424)
Q Consensus 229 p~~Rps~~~~~~~l~~~~~~ 248 (424)
|++|||+.+++++|+.+...
T Consensus 255 p~~Rps~~ell~~L~~~~~~ 274 (281)
T 3cc6_A 255 PSDRPRFTELVCSLSDVYQM 274 (281)
T ss_dssp GGGSCCHHHHHHHHHHHHHH
T ss_pred chhCcCHHHHHHHHHHHHHh
Confidence 99999999999999988764
|
| >3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-43 Score=333.42 Aligned_cols=246 Identities=20% Similarity=0.247 Sum_probs=201.8
Q ss_pred CCCcccceeee------ecceecccccCCCc-hhhhHHHHHHHHHhcCCCcCcceeEEEEE--eCCeeeEEEecCCCCCH
Q 014478 2 GGRCSKFSICW------FHCHLKSSVLESSD-LGETLNLEEAKAVGNLRSERLANLIGCCY--EADERLLVAEFMPNETL 72 (424)
Q Consensus 2 G~~g~v~~~~~------~~~~v~~~~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~~~~~~~--~~~~~~lv~e~~~~gsL 72 (424)
|++|.||.+.+ .+..|++|++.... ...+.+.+|++++++++||||+++++++. .....++||||+++++|
T Consensus 34 G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~~~~~~L 113 (327)
T 3lxl_A 34 GNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCL 113 (327)
T ss_dssp ETTEEEEEEEECTTSSSCSEEEEEEEESSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSSCEEEEEEECCTTCBH
T ss_pred CCCeEEEEEEeccCCCCcceEEEEEEeccCCHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCCceEEEEEeecCCCCH
Confidence 89999999985 56668888876554 34567899999999999999999999987 44568899999999999
Q ss_pred HhHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCC-------Cccc
Q 014478 73 AKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG-------KSYS 145 (424)
Q Consensus 73 ~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~-------~~~~ 145 (424)
.+++.. ....+++.+++.++.|++.||.|||+++ ++||||||+|||++.++.+||+|||+++..... ....
T Consensus 114 ~~~l~~-~~~~~~~~~~~~i~~qi~~al~~lH~~~-ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~ 191 (327)
T 3lxl_A 114 RDFLQR-HRARLDASRLLLYSSQICKGMEYLGSRR-CVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQ 191 (327)
T ss_dssp HHHHHH-HGGGCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEEEETTEEEECCGGGCEECCTTCSEEECSSCCC
T ss_pred HHHHHh-cccCCCHHHHHHHHHHHHHHHHHHHhCC-ccCCCCChhhEEECCCCCEEEcccccceecccCCccceeeccCC
Confidence 999964 2346999999999999999999999999 999999999999999999999999999876433 2335
Q ss_pred cCccCCCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhh----------hhhhHhhhcccCCCCCchhHH
Q 014478 146 TNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRS----------KNFLLLMDSALEGHFSNDEGT 215 (424)
Q Consensus 146 gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~ 215 (424)
+|..|+|||++.+..++.++|||||||++|+|++|..||.......... ...............+..+++
T Consensus 192 ~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (327)
T 3lxl_A 192 SPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALSRLLELLEEGQRLPAPPACPA 271 (327)
T ss_dssp SCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHCC----CCHHHHHHHHHHTTCCCCCCTTCCH
T ss_pred ccccccCHHHhccCCCChHHhHHHHHHHHHHHHhCCCCCccccchhhhhcccccccccHHHHHHHhhcccCCCCCCcccH
Confidence 7788999999998889999999999999999999998876543222111 122233334444556777889
Q ss_pred HHHHHHHHhcccCcCCCCCHHHHHHHHHHHhhhh
Q 014478 216 ELVRLASRCLQSEARERPNAKSLVISLMSLQKEA 249 (424)
Q Consensus 216 ~l~~li~~cl~~dp~~Rps~~~~~~~l~~~~~~~ 249 (424)
++.++|.+||+.||.+|||+.+++++|+.+....
T Consensus 272 ~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~~ 305 (327)
T 3lxl_A 272 EVHELMKLCWAPSPQDRPSFSALGPQLDMLWSGS 305 (327)
T ss_dssp HHHHHHHHHTCSSGGGSCCHHHHHHHHHHC----
T ss_pred HHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhhh
Confidence 9999999999999999999999999999887653
|
| >4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6e-43 Score=322.88 Aligned_cols=238 Identities=21% Similarity=0.322 Sum_probs=195.6
Q ss_pred CCCcccceeee--ecceecccccCCCchh--------hhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCC
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESSDLG--------ETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNET 71 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~~~~--------~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gs 71 (424)
|++|.||.+.+ .+..+++|++...... .+.+.+|++++++++||||+++++++.+.. ++||||+++|+
T Consensus 30 G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~--~lv~e~~~~~~ 107 (287)
T 4f0f_A 30 GGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPP--RMVMEFVPCGD 107 (287)
T ss_dssp CSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETTTT--EEEEECCTTCB
T ss_pred CCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecCCC--eEEEEecCCCC
Confidence 89999999988 5677888877443321 167889999999999999999999987654 79999999999
Q ss_pred HHhHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCC-cccccCCCCCeeecCCCC-----eEEccccccccCCCC-Ccc
Q 014478 72 LAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGR-ALYHDLNAYRILFDKDGN-----PRLSSFGLMKNSRDG-KSY 144 (424)
Q Consensus 72 L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~-ivH~dikp~Nill~~~~~-----~kl~Dfg~~~~~~~~-~~~ 144 (424)
|.+++.. ....+++..++.++.|++.||.|||++++ ++||||||+|||++.++. +||+|||+++..... ...
T Consensus 108 L~~~l~~-~~~~~~~~~~~~~~~~l~~~l~~lH~~~~~ivH~dikp~Nil~~~~~~~~~~~~kl~Dfg~~~~~~~~~~~~ 186 (287)
T 4f0f_A 108 LYHRLLD-KAHPIKWSVKLRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQQSVHSVSGL 186 (287)
T ss_dssp HHHHHHC-TTSCCCHHHHHHHHHHHHHHHHHHHTSSSCCBCSCCSGGGEEESCCCTTCSCCEEECCCTTCBCCSSCEECC
T ss_pred HHHHHhc-ccCCccHHHHHHHHHHHHHHHHHHHhCCCCeecCCCCcceEEEeccCCCCceeEEeCCCCcccccccccccc
Confidence 9998865 35679999999999999999999999864 999999999999988776 999999999865543 345
Q ss_pred ccCccCCCccccc--cCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHHHHHHHH
Q 014478 145 STNLAFTPPEYMR--TGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLAS 222 (424)
Q Consensus 145 ~gt~~y~aPE~~~--~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 222 (424)
.||+.|+|||++. ...++.++|||||||++|+|++|..||........ ...............+..+++++.+++.
T Consensus 187 ~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~l~~li~ 264 (287)
T 4f0f_A 187 LGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKI--KFINMIREEGLRPTIPEDCPPRLRNVIE 264 (287)
T ss_dssp CCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTCCCCHH--HHHHHHHHSCCCCCCCTTSCHHHHHHHH
T ss_pred CCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCccccccHH--HHHHHHhccCCCCCCCcccCHHHHHHHH
Confidence 7899999999984 44578899999999999999999988865322111 1112223334445567778899999999
Q ss_pred HhcccCcCCCCCHHHHHHHHHH
Q 014478 223 RCLQSEARERPNAKSLVISLMS 244 (424)
Q Consensus 223 ~cl~~dp~~Rps~~~~~~~l~~ 244 (424)
+||+.||++|||++++++.|++
T Consensus 265 ~~l~~dp~~Rps~~~ll~~L~~ 286 (287)
T 4f0f_A 265 LCWSGDPKKRPHFSYIVKELSE 286 (287)
T ss_dssp HHTCSSGGGSCCHHHHHHHHHT
T ss_pred HHhcCChhhCcCHHHHHHHHHh
Confidence 9999999999999999999875
|
| >1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-43 Score=337.57 Aligned_cols=236 Identities=16% Similarity=0.135 Sum_probs=194.7
Q ss_pred CCCcccceeee--ecceecccccCCCc-hhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHhHhcc
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESSD-LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFH 78 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~ 78 (424)
|+||.||.+.+ .+..+++|++.... .....+.+|+++|+.++||||+++++++.+....++||||++||+|.+++..
T Consensus 62 G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~E~~~gg~L~~~l~~ 141 (387)
T 1kob_A 62 GAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEFLSGGELFDRIAA 141 (387)
T ss_dssp ETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEEECCCCCBHHHHTTC
T ss_pred CCCEEEEEEEECCCCCEEEEEEecccchhhHHHHHHHHHHHHhCCCcCCCeEEEEEEeCCEEEEEEEcCCCCcHHHHHHh
Confidence 89999999987 45667777775443 3456788999999999999999999999999999999999999999999965
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecC--CCCeEEccccccccCCCCC---ccccCccCCCc
Q 014478 79 WETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDK--DGNPRLSSFGLMKNSRDGK---SYSTNLAFTPP 153 (424)
Q Consensus 79 ~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~--~~~~kl~Dfg~~~~~~~~~---~~~gt~~y~aP 153 (424)
....+++.+++.++.||+.||.|||+++ |+||||||+|||++. ++.+||+|||+++...... ...||+.|+||
T Consensus 142 -~~~~l~~~~~~~i~~qi~~aL~~LH~~g-ivHrDlkp~NIll~~~~~~~vkL~DFG~a~~~~~~~~~~~~~gt~~y~aP 219 (387)
T 1kob_A 142 -EDYKMSEAEVINYMRQACEGLKHMHEHS-IVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVKVTTATAEFAAP 219 (387)
T ss_dssp -TTCCBCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEESSTTCCCEEECCCTTCEECCTTSCEEEECSSGGGCCH
T ss_pred -hcCCCCHHHHHHHHHHHHHHHHHHHhCC-eeecccchHHeEEecCCCCceEEEecccceecCCCcceeeeccCCCccCc
Confidence 3457999999999999999999999999 999999999999974 4779999999998765442 34689999999
Q ss_pred cccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHHHHHHHHHhcccCcCCCC
Q 014478 154 EYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERP 233 (424)
Q Consensus 154 E~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rp 233 (424)
|++.+..++.++|||||||++|+|++|..||.......... ................+++++.+||.+||..||.+||
T Consensus 220 E~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~--~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rp 297 (387)
T 1kob_A 220 EIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQ--NVKRCDWEFDEDAFSSVSPEAKDFIKNLLQKEPRKRL 297 (387)
T ss_dssp HHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHH--HHHHCCCCCCSSTTTTSCHHHHHHHHTTSCSSGGGSC
T ss_pred hhccCCCCCCcccEeeHhHHHHHHHhCCCCCCCCCHHHHHH--HHHhCCCCCCccccccCCHHHHHHHHHHcCCChhHCc
Confidence 99998889999999999999999999998887642211111 0111111122223345788999999999999999999
Q ss_pred CHHHHHHH
Q 014478 234 NAKSLVIS 241 (424)
Q Consensus 234 s~~~~~~~ 241 (424)
|+.+++++
T Consensus 298 t~~ell~h 305 (387)
T 1kob_A 298 TVHDALEH 305 (387)
T ss_dssp CHHHHHTS
T ss_pred CHHHHhhC
Confidence 99999865
|
| >1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-43 Score=333.88 Aligned_cols=231 Identities=15% Similarity=0.183 Sum_probs=197.1
Q ss_pred CCCcccceeee--ecceecccccCCCc----hhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHhH
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESSD----LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKH 75 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~~----~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~ 75 (424)
|+||.||.+.+ .+..+++|++.... ...+.+.+|+++|+.++||||+++++++.+....++||||++||+|.++
T Consensus 52 G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~gg~L~~~ 131 (350)
T 1rdq_E 52 GSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSH 131 (350)
T ss_dssp CSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCTTCBHHHH
T ss_pred CcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEEEEcCCCCCcHHHH
Confidence 89999999988 46778888875433 2346788999999999999999999999999999999999999999999
Q ss_pred hccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCC-CccccCccCCCcc
Q 014478 76 LFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG-KSYSTNLAFTPPE 154 (424)
Q Consensus 76 l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~-~~~~gt~~y~aPE 154 (424)
+.. ...+++.++..++.||+.||.|||+++ |+||||||+|||++.+|.+||+|||+++..... ....||+.|+|||
T Consensus 132 l~~--~~~~~~~~~~~~~~qi~~aL~~LH~~~-ivHrDlkp~NIll~~~g~~kL~DFg~a~~~~~~~~~~~gt~~y~aPE 208 (350)
T 1rdq_E 132 LRR--IGRFSEPHARFYAAQIVLTFEYLHSLD-LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWTLCGTPEALAPE 208 (350)
T ss_dssp HHH--HCCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEECTTSCEEECCCTTCEECSSCBCCCEECGGGCCHH
T ss_pred HHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-cccccCccceEEECCCCCEEEcccccceeccCCcccccCCccccCHH
Confidence 975 357999999999999999999999999 999999999999999999999999999876543 3567999999999
Q ss_pred ccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHHHHHHHHHhcccCcCCCCC
Q 014478 155 YMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERPN 234 (424)
Q Consensus 155 ~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps 234 (424)
++.+..++.++|||||||++|||++|..||........ ...+... ....|..+++++.++|.+||+.||.+||+
T Consensus 209 ~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~----~~~i~~~--~~~~p~~~~~~~~~li~~lL~~dp~~R~~ 282 (350)
T 1rdq_E 209 IILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI----YEKIVSG--KVRFPSHFSSDLKDLLRNLLQVDLTKRFG 282 (350)
T ss_dssp HHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH----HHHHHHC--CCCCCTTCCHHHHHHHHHHSCSCTTTCTT
T ss_pred HhcCCCCCCcCCEecccHhHhHHhhCCCCCCCCCHHHH----HHHHHcC--CCCCCCCCCHHHHHHHHHHhhcCHHhccC
Confidence 99988999999999999999999999988876422211 1112222 22456677889999999999999999998
Q ss_pred -----HHHHHHH
Q 014478 235 -----AKSLVIS 241 (424)
Q Consensus 235 -----~~~~~~~ 241 (424)
+++++++
T Consensus 283 ~~~~~~~ei~~h 294 (350)
T 1rdq_E 283 NLKNGVNDIKNH 294 (350)
T ss_dssp SSTTTTHHHHTS
T ss_pred CccCCHHHHHhC
Confidence 8888765
|
| >2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ... | Back alignment and structure |
|---|
Probab=100.00 E-value=4.8e-43 Score=330.71 Aligned_cols=243 Identities=18% Similarity=0.281 Sum_probs=201.9
Q ss_pred CCCcccceeeee---------cceecccccCCCc--hhhhHHHHHHHHHhcC-CCcCcceeEEEEEeCCeeeEEEecCCC
Q 014478 2 GGRCSKFSICWF---------HCHLKSSVLESSD--LGETLNLEEAKAVGNL-RSERLANLIGCCYEADERLLVAEFMPN 69 (424)
Q Consensus 2 G~~g~v~~~~~~---------~~~v~~~~~~~~~--~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~~~~ 69 (424)
|+||.||.+.+. +..|++|++.... .....+.+|+++++++ +||||+++++++...+..++||||+++
T Consensus 46 G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~e~~~~ 125 (334)
T 2pvf_A 46 GAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASK 125 (334)
T ss_dssp CSSCEEEEEEETTCSTTCC---CEEEEEECCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSCCEEEEECCTT
T ss_pred cCceeEEEeEeccccccccccceEEEEeeeccCCcHHHHHHHHHHHHHHHHhhcCCCEeeEEEEEccCCceEEEEECCCC
Confidence 899999999863 3457777775433 3456789999999999 899999999999999999999999999
Q ss_pred CCHHhHhccCC--------------CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEcccccc
Q 014478 70 ETLAKHLFHWE--------------TQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLM 135 (424)
Q Consensus 70 gsL~~~l~~~~--------------~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~ 135 (424)
|+|.+++.... ...+++.+++.++.||+.||.|||+++ |+||||||+||+++.++.+||+|||++
T Consensus 126 ~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~-ivH~Dlkp~NIll~~~~~~kL~Dfg~~ 204 (334)
T 2pvf_A 126 GNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQK-CIHRDLAARNVLVTENNVMKIADFGLA 204 (334)
T ss_dssp CBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEECTTCCEEECCCTTC
T ss_pred CcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCC-eeCCCCccceEEEcCCCCEEEcccccc
Confidence 99999997532 124899999999999999999999999 999999999999999999999999999
Q ss_pred ccCCCC------CccccCccCCCccccccCCCCCCcceehhHHHHHHHhh-CCCCCCchhhHHHhhhhhhHhhhcccCCC
Q 014478 136 KNSRDG------KSYSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKNFLLLMDSALEGH 208 (424)
Q Consensus 136 ~~~~~~------~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (424)
+..... ....+|+.|+|||++.+..++.++|||||||++|+|++ |..||....... ....+.......
T Consensus 205 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~-----~~~~~~~~~~~~ 279 (334)
T 2pvf_A 205 RDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE-----LFKLLKEGHRMD 279 (334)
T ss_dssp EECTTTSSEECCSCCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCHHH-----HHHHHHHTCCCC
T ss_pred ccccccccccccCCCCcccceeChHHhcCCCcChHHHHHHHHHHHHHHHhCCCCCcCcCCHHH-----HHHHHhcCCCCC
Confidence 865532 22346788999999998889999999999999999999 888876542221 222222333344
Q ss_pred CCchhHHHHHHHHHHhcccCcCCCCCHHHHHHHHHHHhhhhh
Q 014478 209 FSNDEGTELVRLASRCLQSEARERPNAKSLVISLMSLQKEAE 250 (424)
Q Consensus 209 ~~~~~~~~l~~li~~cl~~dp~~Rps~~~~~~~l~~~~~~~~ 250 (424)
.+..++.++.+++.+||..||.+|||+.++++.|+.+.....
T Consensus 280 ~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~l~~~~~ 321 (334)
T 2pvf_A 280 KPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTLTT 321 (334)
T ss_dssp CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHC
T ss_pred CCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhccc
Confidence 566778899999999999999999999999999999877533
|
| >3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-43 Score=325.92 Aligned_cols=242 Identities=18% Similarity=0.268 Sum_probs=185.2
Q ss_pred CCCcccceeeeecceecccccCCC---chhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHhHhcc
Q 014478 2 GGRCSKFSICWFHCHLKSSVLESS---DLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFH 78 (424)
Q Consensus 2 G~~g~v~~~~~~~~~v~~~~~~~~---~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~ 78 (424)
|+||.||.+.+.+ .+++|++... ....+.|.+|++++++++||||+++++++. ....++||||+++++|.+++..
T Consensus 35 G~~g~Vy~~~~~~-~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-~~~~~lv~e~~~~~~L~~~l~~ 112 (289)
T 3og7_A 35 GSFGTVYKGKWHG-DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST-APQLAIVTQWCEGSSLYHHLHA 112 (289)
T ss_dssp CSSEEEEEEESSS-EEEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEEECCCEEEHHHHHTT
T ss_pred CCCeEEEEEEEcC-ceEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEEEEeecc-CCccEEEEEecCCCcHHHHHhh
Confidence 8999999998755 4677766433 334578899999999999999999999764 4568999999999999999964
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCC------CccccCccCCC
Q 014478 79 WETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG------KSYSTNLAFTP 152 (424)
Q Consensus 79 ~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~------~~~~gt~~y~a 152 (424)
....+++.+++.++.|++.||.|||+++ ++||||||+||+++.++.+||+|||+++..... ....||+.|+|
T Consensus 113 -~~~~~~~~~~~~i~~qi~~~L~~lH~~~-i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~a 190 (289)
T 3og7_A 113 -SETKFEMKKLIDIARQTARGMDYLHAKS-IIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMA 190 (289)
T ss_dssp -C---CCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEEETTTEEEECCCC------------------CCCTTCC
T ss_pred -ccCCCCHHHHHHHHHHHHHHHHHHHhCC-cccccCccceEEECCCCCEEEccceeccccccccccccccccCCCccccC
Confidence 3567999999999999999999999999 999999999999999999999999998754421 23468999999
Q ss_pred ccccc---cCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHHHHHHHHHhcccCc
Q 014478 153 PEYMR---TGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEA 229 (424)
Q Consensus 153 PE~~~---~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp 229 (424)
||.+. +..++.++||||||+++|+|++|+.||............................+++++.+++.+||+.||
T Consensus 191 PE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p 270 (289)
T 3og7_A 191 PEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSLSPDLSKVRSNCPKRMKRLMAECLKKKR 270 (289)
T ss_dssp HHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSSCCCHHHHHHHHHHTSCCCCTTSSCTTSCHHHHHHHHHHTCSSG
T ss_pred chhhcccCCCCCCcccchHHHHHHHHHHHHCCCCccccchHHHHHHHhcccccCcchhhccccCCHHHHHHHHHHccCCh
Confidence 99987 556888999999999999999999888653211111111111011111122344678899999999999999
Q ss_pred CCCCCHHHHHHHHHHHhh
Q 014478 230 RERPNAKSLVISLMSLQK 247 (424)
Q Consensus 230 ~~Rps~~~~~~~l~~~~~ 247 (424)
.+|||+.++++.|+.+.+
T Consensus 271 ~~Rps~~ell~~L~~l~~ 288 (289)
T 3og7_A 271 DERPSFPRILAEIEELAR 288 (289)
T ss_dssp GGSCCHHHHHHHHHHTTC
T ss_pred hhCCCHHHHHHHHHHHhh
Confidence 999999999999988753
|
| >3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=4.4e-43 Score=331.26 Aligned_cols=242 Identities=15% Similarity=0.196 Sum_probs=191.2
Q ss_pred CCCcccceeeeecceecccccCCCchhhhHHHHHHHHHhcC--CCcCcceeEEEEEeC----CeeeEEEecCCCCCHHhH
Q 014478 2 GGRCSKFSICWFHCHLKSSVLESSDLGETLNLEEAKAVGNL--RSERLANLIGCCYEA----DERLLVAEFMPNETLAKH 75 (424)
Q Consensus 2 G~~g~v~~~~~~~~~v~~~~~~~~~~~~~~~~~E~~~l~~l--~h~~iv~~~~~~~~~----~~~~lv~e~~~~gsL~~~ 75 (424)
|+||.||.+.+.+..|++|++..... ..+..|.+++..+ +||||+++++++... ...++||||+++|+|.++
T Consensus 48 G~~g~V~~~~~~~~~vavK~~~~~~~--~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~ 125 (337)
T 3mdy_A 48 GRYGEVWMGKWRGEKVAVKVFFTTEE--ASWFRETEIYQTVLMRHENILGFIAADIKGTGSWTQLYLITDYHENGSLYDY 125 (337)
T ss_dssp ETTEEEEEEEETTEEEEEEEEEGGGH--HHHHHHHHHHTSTTCCCTTBCCEEEEEEESCGGGCEEEEEECCCTTCBHHHH
T ss_pred CCCeEEEEEEECCceEEEEEEecccc--chhhhHHHHHHHHhhcCCCeeeEEEEEccCCCCCCceEEEEeccCCCcHHHH
Confidence 89999999999999999998865443 3445555555554 999999999999887 678999999999999999
Q ss_pred hccCCCCCCCHHHHHHHHHHHHHHHHHHHhC--------CCcccccCCCCCeeecCCCCeEEccccccccCCCC------
Q 014478 76 LFHWETQPMKWAMRLRVALYLAQALEYCSSK--------GRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG------ 141 (424)
Q Consensus 76 l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~--------~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~------ 141 (424)
+.. ..+++.+++.++.|++.||.|||++ + |+||||||+|||++.++.+||+|||+++.....
T Consensus 126 l~~---~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~-ivH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~ 201 (337)
T 3mdy_A 126 LKS---TTLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPA-IAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDI 201 (337)
T ss_dssp HHH---CCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCC-EECSCCCGGGEEECTTSCEEECCCTTCEECC--------
T ss_pred hhc---cCCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCC-EEecccchHHEEECCCCCEEEEeCCCceeeccccccccC
Confidence 954 4799999999999999999999998 8 999999999999999999999999999765432
Q ss_pred --CccccCccCCCccccccCCCCCC------cceehhHHHHHHHhhC----------CCCCCchhhHHHhhhhhhH-hhh
Q 014478 142 --KSYSTNLAFTPPEYMRTGRVTPE------SVVYSFGTMLLDLLSG----------KHIPPSHALDLIRSKNFLL-LMD 202 (424)
Q Consensus 142 --~~~~gt~~y~aPE~~~~~~~~~~------~Dv~slG~~l~el~~g----------~~~~~~~~~~~~~~~~~~~-~~~ 202 (424)
....||+.|+|||++.+...+.. +|||||||++|||++| ..|+............... ...
T Consensus 202 ~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~ 281 (337)
T 3mdy_A 202 PPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLPYHDLVPSDPSYEDMREIVCI 281 (337)
T ss_dssp -CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTT
T ss_pred CCCCCccCcceeChhhcccccCCccccCccccchHHHHHHHHHHHhccCcccccccccccHhhhcCCCCchhhhHHHHhh
Confidence 23468999999999987766655 9999999999999999 5444332100000011111 111
Q ss_pred cccCCCCC-----chhHHHHHHHHHHhcccCcCCCCCHHHHHHHHHHHhhhh
Q 014478 203 SALEGHFS-----NDEGTELVRLASRCLQSEARERPNAKSLVISLMSLQKEA 249 (424)
Q Consensus 203 ~~~~~~~~-----~~~~~~l~~li~~cl~~dp~~Rps~~~~~~~l~~~~~~~ 249 (424)
.......+ ..+++++.+++.+||+.||++|||+.+++++|+.+.+..
T Consensus 282 ~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~~~ 333 (337)
T 3mdy_A 282 KKLRPSFPNRWSSDECLRQMGKLMTECWAHNPASRLTALRVKKTLAKMSESQ 333 (337)
T ss_dssp SCCCCCCCGGGGGSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHTT
T ss_pred hccCccccccchhhHHHHHHHHHHHHhhhhChhhCCCHHHHHHHHHHHHhhc
Confidence 12222233 267889999999999999999999999999999988753
|
| >2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-43 Score=338.09 Aligned_cols=234 Identities=17% Similarity=0.137 Sum_probs=191.7
Q ss_pred CCCcccceeee--ecceecccccCCCc-hhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHhHhcc
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESSD-LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFH 78 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~ 78 (424)
|+||.||++.+ .+..+++|++.... ...+.+.+|+++|++++||||+++++++...+..++||||+++|+|.+++..
T Consensus 100 G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~~~~~~L~~~l~~ 179 (373)
T 2x4f_A 100 GRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGGELFDRIID 179 (373)
T ss_dssp ----CEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCTTCEEHHHHHH
T ss_pred CcCEEEEEEEEcCCCcEEEEEEEcccccccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeCCCCCcHHHHHHh
Confidence 89999999987 56778888876544 4567899999999999999999999999999999999999999999998865
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeee--cCCCCeEEccccccccCCCC---CccccCccCCCc
Q 014478 79 WETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILF--DKDGNPRLSSFGLMKNSRDG---KSYSTNLAFTPP 153 (424)
Q Consensus 79 ~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill--~~~~~~kl~Dfg~~~~~~~~---~~~~gt~~y~aP 153 (424)
....+++..++.++.||+.||.|||+++ |+||||||+|||+ +.++.+||+|||+++..... ....||+.|+||
T Consensus 180 -~~~~l~~~~~~~i~~qi~~aL~~LH~~~-ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~~~~~~~~~gt~~y~aP 257 (373)
T 2x4f_A 180 -ESYNLTELDTILFMKQICEGIRHMHQMY-ILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREKLKVNFGTPEFLAP 257 (373)
T ss_dssp -TGGGCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEEEETTTTEEEECCCSSCEECCTTCBCCCCCSSCTTCCH
T ss_pred -cCCCCCHHHHHHHHHHHHHHHHHHHHCC-cccccCCHHHEEEecCCCCcEEEEeCCCceecCCccccccccCCCcEeCh
Confidence 3457999999999999999999999999 9999999999999 56778999999999876543 234689999999
Q ss_pred cccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhcc--cCCCCCchhHHHHHHHHHHhcccCcCC
Q 014478 154 EYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSA--LEGHFSNDEGTELVRLASRCLQSEARE 231 (424)
Q Consensus 154 E~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~li~~cl~~dp~~ 231 (424)
|++.+..++.++|||||||++|||++|..||........ ...+.... ........+++++.+||.+||+.||.+
T Consensus 258 E~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~----~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~ 333 (373)
T 2x4f_A 258 EVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDAET----LNNILACRWDLEDEEFQDISEEAKEFISKLLIKEKSW 333 (373)
T ss_dssp HHHTTCBCCHHHHHHHHHHHHHHHHHSSCTTCCSSHHHH----HHHHHHTCCCSCSGGGTTSCHHHHHHHHTTSCSSGGG
T ss_pred hhccCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHHH----HHHHHhccCCCChhhhccCCHHHHHHHHHHcCCChhh
Confidence 999988899999999999999999999988876432211 11111111 111112346789999999999999999
Q ss_pred CCCHHHHHHH
Q 014478 232 RPNAKSLVIS 241 (424)
Q Consensus 232 Rps~~~~~~~ 241 (424)
|||+.+++++
T Consensus 334 Rps~~e~l~h 343 (373)
T 2x4f_A 334 RISASEALKH 343 (373)
T ss_dssp SCCHHHHHHS
T ss_pred CCCHHHHhcC
Confidence 9999999985
|
| >3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=4.3e-43 Score=325.62 Aligned_cols=242 Identities=19% Similarity=0.253 Sum_probs=195.0
Q ss_pred CCCcccceeeeecc-----eecccccCCC--chhhhHHHHHHHHHhcCCCcCcceeEEEEEe-CCeeeEEEecCCCCCHH
Q 014478 2 GGRCSKFSICWFHC-----HLKSSVLESS--DLGETLNLEEAKAVGNLRSERLANLIGCCYE-ADERLLVAEFMPNETLA 73 (424)
Q Consensus 2 G~~g~v~~~~~~~~-----~v~~~~~~~~--~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-~~~~~lv~e~~~~gsL~ 73 (424)
|+||.||.+.+... .+++|++... ....+.+.+|+.++++++||||+++++++.. ++..++||||+++|+|.
T Consensus 36 G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v~e~~~~~~L~ 115 (298)
T 3f66_A 36 GHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLR 115 (298)
T ss_dssp ETTEEEEEEEEC-----CEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEEEECCTTCBHH
T ss_pred cCCceEEEEEEecCCCceeEEEEEecccCCCHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCCCceEEEEeCCCCCCHH
Confidence 89999999987332 3566665432 2345788999999999999999999999754 45788999999999999
Q ss_pred hHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCC--------Cccc
Q 014478 74 KHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG--------KSYS 145 (424)
Q Consensus 74 ~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~--------~~~~ 145 (424)
+++.. ....+++.+++.++.|++.||.|||+++ ++||||||+||+++.++.+||+|||+++..... ....
T Consensus 116 ~~l~~-~~~~~~~~~~~~i~~ql~~~l~~lH~~~-i~H~dikp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~ 193 (298)
T 3f66_A 116 NFIRN-ETHNPTVKDLIGFGLQVAKGMKYLASKK-FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAK 193 (298)
T ss_dssp HHHHC-TTCCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEECTTCCEEECSCGGGCCCSCGGGCBC-----CC
T ss_pred HHHHh-cccCCCHHHHHHHHHHHHHHHHHHHhCC-ccCCCCchheEEECCCCCEEECcccccccccccchhccccccCCC
Confidence 99965 4567899999999999999999999999 999999999999999999999999999865432 2335
Q ss_pred cCccCCCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHHHHHHHHHhc
Q 014478 146 TNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCL 225 (424)
Q Consensus 146 gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl 225 (424)
+|+.|+|||.+.+..++.++||||||+++|+|++|..|+... ..................+..++..+.+++.+||
T Consensus 194 ~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l 269 (298)
T 3f66_A 194 LPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPD----VNTFDITVYLLQGRRLLQPEYCPDPLYEVMLKCW 269 (298)
T ss_dssp BCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTT----SCTTTHHHHHHTTCCCCCCTTCCHHHHHHHHHHT
T ss_pred CCccccChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCcc----CCHHHHHHHHhcCCCCCCCccCCHHHHHHHHHHc
Confidence 678899999999889999999999999999999965444322 1111122222223333445667889999999999
Q ss_pred ccCcCCCCCHHHHHHHHHHHhhhh
Q 014478 226 QSEARERPNAKSLVISLMSLQKEA 249 (424)
Q Consensus 226 ~~dp~~Rps~~~~~~~l~~~~~~~ 249 (424)
+.||++|||+.++++.|+.+....
T Consensus 270 ~~~p~~Rps~~ell~~L~~~~~~~ 293 (298)
T 3f66_A 270 HPKAEMRPSFSELVSRISAIFSTF 293 (298)
T ss_dssp CSSGGGSCCHHHHHHHHHHHHHTS
T ss_pred CCChhhCcCHHHHHHHHHHHHHhh
Confidence 999999999999999999987753
|
| >4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-43 Score=327.66 Aligned_cols=243 Identities=18% Similarity=0.254 Sum_probs=199.4
Q ss_pred CCCcccceeee------ecceecccccCCCc--hhhhHHHHHHHHHhcCCCcCcceeEEEEEeC--CeeeEEEecCCCCC
Q 014478 2 GGRCSKFSICW------FHCHLKSSVLESSD--LGETLNLEEAKAVGNLRSERLANLIGCCYEA--DERLLVAEFMPNET 71 (424)
Q Consensus 2 G~~g~v~~~~~------~~~~v~~~~~~~~~--~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~--~~~~lv~e~~~~gs 71 (424)
|++|.||.+.| .+..+++|++.... .....+.+|+++++.++||||+++++++... ...++||||+++|+
T Consensus 32 G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~~~~~~ 111 (302)
T 4e5w_A 32 GHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGS 111 (302)
T ss_dssp CSSEEEEEEEECTTSSSCSEEEEEEEEC-----CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC---CCEEEEEECCTTCB
T ss_pred CCceEEEEEEEccccCccCeEEEEEEecccccchhHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCceEEEEEEeCCCCc
Confidence 89999999985 56778888775433 3457889999999999999999999999876 56889999999999
Q ss_pred HHhHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCC-------Ccc
Q 014478 72 LAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG-------KSY 144 (424)
Q Consensus 72 L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~-------~~~ 144 (424)
|.+++.. ....+++.+++.++.|++.||.|||+++ ++||||||+||+++.++.+||+|||+++..... ...
T Consensus 112 L~~~l~~-~~~~~~~~~~~~~~~~i~~~l~~lH~~~-i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~ 189 (302)
T 4e5w_A 112 LKEYLPK-NKNKINLKQQLKYAVQICKGMDYLGSRQ-YVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEYYTVKDDR 189 (302)
T ss_dssp HHHHHHH-HTTTCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEEEETTEEEECCCTTCEECCTTCCEEECCCCT
T ss_pred HHHHHHh-ccccCCHHHHHHHHHHHHHHHHHhhcCC-cccCCCchheEEEcCCCCEEECcccccccccCCCcceeccCCC
Confidence 9999954 3457999999999999999999999999 999999999999999999999999999876543 234
Q ss_pred ccCccCCCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhH----------HHhhhhhhHhhhcccCCCCCchhH
Q 014478 145 STNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALD----------LIRSKNFLLLMDSALEGHFSNDEG 214 (424)
Q Consensus 145 ~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~ 214 (424)
.+|..|+|||++.+..++.++||||||+++|+|++|..|+...... ...................+..++
T Consensus 190 ~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (302)
T 4e5w_A 190 DSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTHGQMTVTRLVNTLKEGKRLPCPPNCP 269 (302)
T ss_dssp TCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCGGGHHHHHHHHHHTTCCCCCCTTCC
T ss_pred CCCccccCCeeecCCCCCcchhHHHHHHHHHHHHHccCCCcchhhHHhhccCCcccccCHHHHHHHHhccCCCCCCCCCC
Confidence 5778899999999888999999999999999999998764332111 011122223333344455667788
Q ss_pred HHHHHHHHHhcccCcCCCCCHHHHHHHHHHHh
Q 014478 215 TELVRLASRCLQSEARERPNAKSLVISLMSLQ 246 (424)
Q Consensus 215 ~~l~~li~~cl~~dp~~Rps~~~~~~~l~~~~ 246 (424)
+++.+++.+||+.||.+|||+.++++.|+.+.
T Consensus 270 ~~l~~li~~~l~~dp~~Rps~~~ll~~L~~ll 301 (302)
T 4e5w_A 270 DEVYQLMRKCWEFQPSNRTSFQNLIEGFEALL 301 (302)
T ss_dssp HHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHh
Confidence 99999999999999999999999999998875
|
| >4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=4e-43 Score=335.65 Aligned_cols=234 Identities=15% Similarity=0.167 Sum_probs=193.2
Q ss_pred CCCcccceeee--ecceecccccCCCc----hhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHhH
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESSD----LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKH 75 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~~----~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~ 75 (424)
||||.||.+.+ .+..+++|++.... .....+.+|+++|+.++||||++++++|.+.+..++||||++||+|..+
T Consensus 26 G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lv~e~~~gg~L~~~ 105 (384)
T 4fr4_A 26 GSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFMVVDLLLGGDLRYH 105 (384)
T ss_dssp CTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECCCTTEEHHHH
T ss_pred CCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEEecCCCCcHHHH
Confidence 89999999987 45667888764332 2356788999999999999999999999999999999999999999999
Q ss_pred hccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCC---CccccCccCCC
Q 014478 76 LFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG---KSYSTNLAFTP 152 (424)
Q Consensus 76 l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~---~~~~gt~~y~a 152 (424)
+.. ...+++..+..++.||+.||.|||+++ |+||||||+|||++.+|.+||+|||+++..... ....||+.|+|
T Consensus 106 l~~--~~~l~~~~~~~~~~qi~~aL~~LH~~g-ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~~~~~~~gt~~Y~a 182 (384)
T 4fr4_A 106 LQQ--NVHFKEETVKLFICELVMALDYLQNQR-IIHRDMKPDNILLDEHGHVHITDFNIAAMLPRETQITTMAGTKPYMA 182 (384)
T ss_dssp HHT--TCCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEECTTSCEEECCCTTCEECCTTCCBCCCCSCGGGCC
T ss_pred HHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC-ceeccCcHHHeEECCCCCEEEeccceeeeccCCCceeccCCCccccC
Confidence 974 567999999999999999999999999 999999999999999999999999999876433 35679999999
Q ss_pred cccccc---CCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHHHHHHHHHhcccCc
Q 014478 153 PEYMRT---GRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEA 229 (424)
Q Consensus 153 PE~~~~---~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp 229 (424)
||++.+ ..++.++|||||||++|||++|..||........ ........ ......+..+++++.+||.+||+.||
T Consensus 183 PE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~--~~~~~~~~-~~~~~~p~~~s~~~~~li~~lL~~dP 259 (384)
T 4fr4_A 183 PEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSS--KEIVHTFE-TTVVTYPSAWSQEMVSLLKKLLEPNP 259 (384)
T ss_dssp GGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCCTTSCH--HHHHHHHH-HCCCCCCTTSCHHHHHHHHHHSCSSG
T ss_pred CeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCCCCCccH--HHHHHHHh-hcccCCCCcCCHHHHHHHHHHhcCCH
Confidence 999974 3589999999999999999999988864321111 11111111 12234566778899999999999999
Q ss_pred CCCCC-HHHHHHH
Q 014478 230 RERPN-AKSLVIS 241 (424)
Q Consensus 230 ~~Rps-~~~~~~~ 241 (424)
.+||+ +++++.+
T Consensus 260 ~~R~s~~~~l~~h 272 (384)
T 4fr4_A 260 DQRFSQLSDVQNF 272 (384)
T ss_dssp GGSCCSHHHHHTS
T ss_pred hHhcccHHHHHcC
Confidence 99998 7776653
|
| >3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-43 Score=336.17 Aligned_cols=231 Identities=17% Similarity=0.242 Sum_probs=192.9
Q ss_pred CCCcccceeee--ecceecccccCCCc----hhhhHHHHHHHHHhcC-CCcCcceeEEEEEeCCeeeEEEecCCCCCHHh
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESSD----LGETLNLEEAKAVGNL-RSERLANLIGCCYEADERLLVAEFMPNETLAK 74 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~~----~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~ 74 (424)
|+||.||.+.+ .+..+++|++.... .....+.+|.+++..+ +||||+++++++.+.+..++||||++||+|.+
T Consensus 34 G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~lv~E~~~gg~L~~ 113 (353)
T 3txo_A 34 GSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRLFFVMEFVNGGDLMF 113 (353)
T ss_dssp ETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEECCCSCBHHH
T ss_pred CCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCCEEEEEEeCCCCCcHHH
Confidence 89999999987 46778888875432 3356678899999988 79999999999999999999999999999999
Q ss_pred HhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCC----CCccccCccC
Q 014478 75 HLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRD----GKSYSTNLAF 150 (424)
Q Consensus 75 ~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~----~~~~~gt~~y 150 (424)
++.. ...+++.++..++.||+.||.|||+++ |+||||||+|||++.+|.+||+|||+++.... .....||+.|
T Consensus 114 ~l~~--~~~~~~~~~~~~~~qi~~aL~~LH~~g-ivHrDlkp~NILl~~~g~ikL~DFG~a~~~~~~~~~~~~~~gt~~y 190 (353)
T 3txo_A 114 HIQK--SRRFDEARARFYAAEIISALMFLHDKG-IIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNGVTTATFCGTPDY 190 (353)
T ss_dssp HHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTT-CBCCCCCGGGEEECTTSCEEECCCTTCBCSCC---------CCGGG
T ss_pred HHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-CcccCCCHHHEEECCCCCEEEccccceeecccCCccccccCCCcCe
Confidence 9965 467999999999999999999999999 99999999999999999999999999986432 2345799999
Q ss_pred CCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHHHHHHHHHhcccCcC
Q 014478 151 TPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEAR 230 (424)
Q Consensus 151 ~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~ 230 (424)
+|||++.+..++.++|||||||++|||++|..||........ ...+... ...+|..+++++.++|.+||+.||+
T Consensus 191 ~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~----~~~i~~~--~~~~p~~~~~~~~~li~~lL~~dP~ 264 (353)
T 3txo_A 191 IAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENEDDL----FEAILND--EVVYPTWLHEDATGILKSFMTKNPT 264 (353)
T ss_dssp CCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH----HHHHHHC--CCCCCTTSCHHHHHHHHHHTCSSGG
T ss_pred EChhhcCCCCcCCccCCCcchHHHHHHHhCCCCCCCCCHHHH----HHHHHcC--CCCCCCCCCHHHHHHHHHHhhhCHH
Confidence 999999988899999999999999999999999876532221 1122222 2234556788999999999999999
Q ss_pred CCCCH------HHHHHH
Q 014478 231 ERPNA------KSLVIS 241 (424)
Q Consensus 231 ~Rps~------~~~~~~ 241 (424)
+||++ +++++|
T Consensus 265 ~R~~~~~~~~~~~il~h 281 (353)
T 3txo_A 265 MRLGSLTQGGEHAILRH 281 (353)
T ss_dssp GSTTSGGGTCTHHHHTS
T ss_pred HccCCcccCCHHHHhhC
Confidence 99998 778765
|
| >3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-43 Score=334.37 Aligned_cols=235 Identities=16% Similarity=0.144 Sum_probs=192.6
Q ss_pred CCCcccceeee--ecceecccccCCCc------hhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHH
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESSD------LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLA 73 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~~------~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~ 73 (424)
|+||.||.+.+ .+..+++|++.... ...+.+.+|+.+++.++||||+++++++..++..++||||++||+|.
T Consensus 35 G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~~~g~~L~ 114 (351)
T 3c0i_A 35 GPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLYMVFEFMDGADLC 114 (351)
T ss_dssp CSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCSSCBHH
T ss_pred CCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEEeCCCCCCHH
Confidence 89999999987 46778888764321 23577899999999999999999999999999999999999999998
Q ss_pred hHhccC--CCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCC---eEEccccccccCCCC----Ccc
Q 014478 74 KHLFHW--ETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGN---PRLSSFGLMKNSRDG----KSY 144 (424)
Q Consensus 74 ~~l~~~--~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~---~kl~Dfg~~~~~~~~----~~~ 144 (424)
+++... .+..+++..+..++.||+.||.|||+++ |+||||||+|||++.++. +||+|||+++..... ...
T Consensus 115 ~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~-ivHrDlkp~NIl~~~~~~~~~vkl~Dfg~a~~~~~~~~~~~~~ 193 (351)
T 3c0i_A 115 FEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNN-IIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGR 193 (351)
T ss_dssp HHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEECSSSTTCCEEECCCTTCEECCTTSCBCCCC
T ss_pred HHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHCC-ceeccCChHHeEEecCCCCCcEEEecCcceeEecCCCeeecCC
Confidence 887532 2346899999999999999999999999 999999999999976654 999999999876543 235
Q ss_pred ccCccCCCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhcccCCC--CCchhHHHHHHHHH
Q 014478 145 STNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGH--FSNDEGTELVRLAS 222 (424)
Q Consensus 145 ~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~li~ 222 (424)
.||+.|+|||++.+..++.++|||||||++|+|++|..||........ ..+........ ....+++++.+||.
T Consensus 194 ~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~-----~~i~~~~~~~~~~~~~~~s~~~~~li~ 268 (351)
T 3c0i_A 194 VGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKERLF-----EGIIKGKYKMNPRQWSHISESAKDLVR 268 (351)
T ss_dssp CSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCSSHHHHH-----HHHHHTCCCCCHHHHTTSCHHHHHHHH
T ss_pred cCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHHHCCCCCCCcHHHHH-----HHHHcCCCCCCccccccCCHHHHHHHH
Confidence 689999999999988899999999999999999999988876422211 11111111100 01245788999999
Q ss_pred HhcccCcCCCCCHHHHHHHH
Q 014478 223 RCLQSEARERPNAKSLVISL 242 (424)
Q Consensus 223 ~cl~~dp~~Rps~~~~~~~l 242 (424)
+||..||++|||+.+++++-
T Consensus 269 ~~L~~dP~~R~s~~e~l~hp 288 (351)
T 3c0i_A 269 RMLMLDPAERITVYEALNHP 288 (351)
T ss_dssp HHTCSSTTTSCCHHHHHTSH
T ss_pred HHCCCChhHCcCHHHHhcCh
Confidence 99999999999999999763
|
| >1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.1e-43 Score=324.08 Aligned_cols=239 Identities=18% Similarity=0.249 Sum_probs=198.6
Q ss_pred CCCcccceeeee----cceecccccCCCc---hhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHh
Q 014478 2 GGRCSKFSICWF----HCHLKSSVLESSD---LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAK 74 (424)
Q Consensus 2 G~~g~v~~~~~~----~~~v~~~~~~~~~---~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~ 74 (424)
|++|.||.+.+. +..+++|++.... ...+.+.+|+++++.++||||+++++++ ..+..++||||+++++|.+
T Consensus 28 G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-~~~~~~lv~e~~~~~~L~~ 106 (291)
T 1xbb_A 28 GNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNK 106 (291)
T ss_dssp CSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEE-ESSSEEEEEECCTTEEHHH
T ss_pred ccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEE-CCCCcEEEEEeCCCCCHHH
Confidence 899999999763 4567777775443 2357889999999999999999999999 5567899999999999999
Q ss_pred HhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCCC-------ccccC
Q 014478 75 HLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGK-------SYSTN 147 (424)
Q Consensus 75 ~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~~-------~~~gt 147 (424)
++.. ...+++.+++.++.|++.||.|||+++ ++||||||+||+++.++.+||+|||+++...... ...+|
T Consensus 107 ~l~~--~~~~~~~~~~~i~~qi~~~l~~LH~~~-i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~ 183 (291)
T 1xbb_A 107 YLQQ--NRHVKDKNIIELVHQVSMGMKYLEESN-FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWP 183 (291)
T ss_dssp HHHH--CTTCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEEEETTEEEECCCTTCEECCTTCSEEEC----CCC
T ss_pred HHHh--CcCCCHHHHHHHHHHHHHHHHHHHhCC-eEcCCCCcceEEEeCCCcEEEccCCcceeeccCCCcccccccCCCC
Confidence 9975 456999999999999999999999999 9999999999999999999999999998765432 22456
Q ss_pred ccCCCccccccCCCCCCcceehhHHHHHHHhh-CCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHHHHHHHHHhcc
Q 014478 148 LAFTPPEYMRTGRVTPESVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQ 226 (424)
Q Consensus 148 ~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~ 226 (424)
+.|+|||++.+..++.++||||||+++|+|++ |..||...... .....+........+..+++++.+++.+||+
T Consensus 184 ~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~ 258 (291)
T 1xbb_A 184 VKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGS-----EVTAMLEKGERMGCPAGCPREMYDLMNLCWT 258 (291)
T ss_dssp GGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHH-----HHHHHHHTTCCCCCCTTCCHHHHHHHHHHTC
T ss_pred ceeeChHHhccCCCChhhhHHHHHHHHHHHHhcCCCCCCCCCHH-----HHHHHHHcCCCCCCCCCCCHHHHHHHHHHcC
Confidence 88999999998889999999999999999999 99887654221 1222233333445566788999999999999
Q ss_pred cCcCCCCCHHHHHHHHHHHhhhh
Q 014478 227 SEARERPNAKSLVISLMSLQKEA 249 (424)
Q Consensus 227 ~dp~~Rps~~~~~~~l~~~~~~~ 249 (424)
.||.+|||+.++++.|+.+....
T Consensus 259 ~dp~~Rps~~~l~~~L~~~~~~~ 281 (291)
T 1xbb_A 259 YDVENRPGFAAVELRLRNYYYDV 281 (291)
T ss_dssp SSTTTSCCHHHHHHHHHHHHHHH
T ss_pred CChhhCcCHHHHHHHHHHHHHHH
Confidence 99999999999999999987653
|
| >2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-42 Score=323.34 Aligned_cols=242 Identities=24% Similarity=0.382 Sum_probs=199.6
Q ss_pred CCCcccceeeeecceecccccCCC-----chhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHhHh
Q 014478 2 GGRCSKFSICWFHCHLKSSVLESS-----DLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHL 76 (424)
Q Consensus 2 G~~g~v~~~~~~~~~v~~~~~~~~-----~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~l 76 (424)
|++|.||.+.+.+..+++|++... ....+.+.+|++++++++||||+++++++...+..++||||+++|+|.+++
T Consensus 42 G~~g~Vy~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l 121 (307)
T 2nru_A 42 GGFGVVYKGYVNNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRL 121 (307)
T ss_dssp CSSEEEEEEESSSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHH
T ss_pred CCCeEEEEEEECCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCCCCeEEEEEEEecCCceEEEEEecCCCcHHHHH
Confidence 899999999998888888877542 234578899999999999999999999999999999999999999999998
Q ss_pred ccC-CCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCC------CccccCcc
Q 014478 77 FHW-ETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG------KSYSTNLA 149 (424)
Q Consensus 77 ~~~-~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~------~~~~gt~~ 149 (424)
... ...++++..++.++.|++.||.|||+++ ++||||||+||+++.++.+||+|||+++..... ....||+.
T Consensus 122 ~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~-i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~g~~~ 200 (307)
T 2nru_A 122 SCLDGTPPLSWHMRCKIAQGAANGINFLHENH-HIHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMTSRIVGTTA 200 (307)
T ss_dssp HTGGGCCCCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCCGGGEEECTTCCEEECCCTTCEECCSCSSCEECSSCCSCGG
T ss_pred HhccCCCCCCHHHHHHHHHHHHHHHHHHhcCC-eecCCCCHHHEEEcCCCcEEEeecccccccccccccccccccCCCcC
Confidence 632 2456999999999999999999999999 999999999999999999999999998765432 23468999
Q ss_pred CCCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhh----------hhhhHhhhcccCCCCCchhHHHHHH
Q 014478 150 FTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRS----------KNFLLLMDSALEGHFSNDEGTELVR 219 (424)
Q Consensus 150 y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~l~~ 219 (424)
|+|||.+. +.++.++||||||+++|+|++|..||.......... ..+...++. .....+...+..+.+
T Consensus 201 y~aPE~~~-~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~ 278 (307)
T 2nru_A 201 YMAPEALR-GEITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIKEEIEDEEKTIEDYIDK-KMNDADSTSVEAMYS 278 (307)
T ss_dssp GCCHHHHT-TEECTHHHHHHHHHHHHHHHHCCCSBCTTBSSSBTTHHHHHHHTTSCCHHHHSCS-SCSCCCHHHHHHHHH
T ss_pred cCChHHhc-CCCCccchhHHHHHHHHHHHHCCCCcccCcchHHHHHHHHHhhhhhhhhhhhccc-cccccchHHHHHHHH
Confidence 99999887 468899999999999999999998876532110000 001111111 122345667889999
Q ss_pred HHHHhcccCcCCCCCHHHHHHHHHHHh
Q 014478 220 LASRCLQSEARERPNAKSLVISLMSLQ 246 (424)
Q Consensus 220 li~~cl~~dp~~Rps~~~~~~~l~~~~ 246 (424)
++.+||+.||.+|||+.+++++|+.+.
T Consensus 279 li~~cl~~~p~~Rps~~~l~~~L~~l~ 305 (307)
T 2nru_A 279 VASQCLHEKKNKRPDIKKVQQLLQEMT 305 (307)
T ss_dssp HHHHHTCSSTTTSCCHHHHHHHHHHHC
T ss_pred HHHHHcCCCcccCcCHHHHHHHHHHHh
Confidence 999999999999999999999998875
|
| >3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-43 Score=333.11 Aligned_cols=234 Identities=15% Similarity=0.118 Sum_probs=191.0
Q ss_pred CCCcccceeee--ecceecccccCCCc--hhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHhHhc
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESSD--LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLF 77 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~~--~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~ 77 (424)
|+||.||.+.+ .+..+++|++.... ...+.+.+|+.+++.++||||+++++++.+++..++||||++||+|.+++.
T Consensus 18 G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~ 97 (323)
T 3tki_A 18 GAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIE 97 (323)
T ss_dssp ETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEECCTTEEGGGGSB
T ss_pred CCCEEEEEEEECCCCcEEEEEEEEcccccchHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEEEcCCCCcHHHHHh
Confidence 89999999987 46778888774433 335678899999999999999999999999999999999999999999996
Q ss_pred cCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCC------CCccccCccCC
Q 014478 78 HWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRD------GKSYSTNLAFT 151 (424)
Q Consensus 78 ~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~------~~~~~gt~~y~ 151 (424)
. ...+++.+++.++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++.... .....||+.|+
T Consensus 98 ~--~~~~~~~~~~~i~~qi~~aL~~LH~~g-ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~ 174 (323)
T 3tki_A 98 P--DIGMPEPDAQRFFHQLMAGVVYLHGIG-ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYV 174 (323)
T ss_dssp T--TTBCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEECTTCCEEECCCTTCEECEETTEECCBCSCCSCGGGS
T ss_pred h--cCCCCHHHHHHHHHHHHHHHHHHHHCC-ccccccchHHEEEeCCCCEEEEEeeccceeccCCcccccCCCccCcCcc
Confidence 4 557999999999999999999999999 99999999999999999999999999975432 13457899999
Q ss_pred CccccccCCC-CCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHHHHHHHHHhcccCcC
Q 014478 152 PPEYMRTGRV-TPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEAR 230 (424)
Q Consensus 152 aPE~~~~~~~-~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~ 230 (424)
|||++.+..+ +.++|||||||++|+|++|..||....... ..................+++++.+||.+||..||+
T Consensus 175 aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~ 251 (323)
T 3tki_A 175 APELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSC---QEYSDWKEKKTYLNPWKKIDSAPLALLHKILVENPS 251 (323)
T ss_dssp CHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSCTTS---HHHHHHHTTCTTSTTGGGSCHHHHHHHHHHSCSSTT
T ss_pred CcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCchHH---HHHHHHhcccccCCccccCCHHHHHHHHHHccCChh
Confidence 9999987765 778999999999999999998886532111 111111111111122345678999999999999999
Q ss_pred CCCCHHHHHHH
Q 014478 231 ERPNAKSLVIS 241 (424)
Q Consensus 231 ~Rps~~~~~~~ 241 (424)
+|||+.+++++
T Consensus 252 ~R~t~~eil~h 262 (323)
T 3tki_A 252 ARITIPDIKKD 262 (323)
T ss_dssp TSCCHHHHTTC
T ss_pred hCcCHHHHhhC
Confidence 99999999865
|
| >4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-43 Score=337.33 Aligned_cols=235 Identities=14% Similarity=0.216 Sum_probs=191.9
Q ss_pred CCCcccceeee--ecceecccccCCCc----hhhhHHHHHHHHHhcC-CCcCcceeEEEEEeCCeeeEEEecCCCCCHHh
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESSD----LGETLNLEEAKAVGNL-RSERLANLIGCCYEADERLLVAEFMPNETLAK 74 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~~----~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~ 74 (424)
|+||.||.+.+ .+..+++|++.... .....+..|..++.++ +||||+++++++.+.+..++||||++||+|..
T Consensus 63 G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~lV~E~~~gg~L~~ 142 (396)
T 4dc2_A 63 GSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMF 142 (396)
T ss_dssp CSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEEEECCTTCBHHH
T ss_pred CCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECCEEEEEEEcCCCCcHHH
Confidence 89999999987 45667777775432 3345688899999887 89999999999999999999999999999999
Q ss_pred HhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCC----CCccccCccC
Q 014478 75 HLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRD----GKSYSTNLAF 150 (424)
Q Consensus 75 ~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~----~~~~~gt~~y 150 (424)
++.. ...+++..+..++.||+.||.|||+++ |+||||||+|||++.+|.+||+|||+++.... .....||+.|
T Consensus 143 ~l~~--~~~l~~~~~~~~~~qi~~aL~~LH~~g-ivHrDLKp~NILl~~~g~ikL~DFGla~~~~~~~~~~~~~~gt~~Y 219 (396)
T 4dc2_A 143 HMQR--QRKLPEEHARFYSAEISLALNYLHERG-IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSTFCGTPNY 219 (396)
T ss_dssp HHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTT-CBCCCCCGGGEEECTTSCEEECCCTTCBCCCCTTCCBCCCCBCGGG
T ss_pred HHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-EEeccCCHHHEEECCCCCEEEeecceeeecccCCCccccccCCccc
Confidence 9975 457999999999999999999999999 99999999999999999999999999986322 2356799999
Q ss_pred CCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHh-----hhhhhHhhhcccCCCCCchhHHHHHHHHHHhc
Q 014478 151 TPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIR-----SKNFLLLMDSALEGHFSNDEGTELVRLASRCL 225 (424)
Q Consensus 151 ~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl 225 (424)
+|||++.+..++.++|||||||++|||++|+.||......... ......+.. ....+|..+++++.+||.+||
T Consensus 220 ~aPE~l~~~~~~~~~DiwslGvllyell~G~~Pf~~~~~~~~~~~~~~~~~~~~i~~--~~~~~p~~~s~~~~~li~~lL 297 (396)
T 4dc2_A 220 IAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILE--KQIRIPRSLSVKAASVLKSFL 297 (396)
T ss_dssp CCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSTTTTC------CCHHHHHHHHHH--CCCCCCTTSCHHHHHHHHHHT
T ss_pred CCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCcccccccccchhhHHHHHHHHhc--cccCCCCcCCHHHHHHHHHHh
Confidence 9999999999999999999999999999999888642111110 001111111 223456678899999999999
Q ss_pred ccCcCCCCCH------HHHHHH
Q 014478 226 QSEARERPNA------KSLVIS 241 (424)
Q Consensus 226 ~~dp~~Rps~------~~~~~~ 241 (424)
+.||.+||++ ++++++
T Consensus 298 ~~dP~~R~~~~~~~~~~ei~~H 319 (396)
T 4dc2_A 298 NKDPKERLGCHPQTGFADIQGH 319 (396)
T ss_dssp CSCTTTSTTCSTTTHHHHHHHS
T ss_pred cCCHhHcCCCCCCCCHHHHhcC
Confidence 9999999985 566654
|
| >1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-43 Score=340.68 Aligned_cols=237 Identities=14% Similarity=0.128 Sum_probs=185.1
Q ss_pred CCCcccceeee--ecceecccccCCCchhhhHHHHHHHHHhcC-CCcCcceeEEEEEe----CCeeeEEEecCCCCCHHh
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESSDLGETLNLEEAKAVGNL-RSERLANLIGCCYE----ADERLLVAEFMPNETLAK 74 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~----~~~~~lv~e~~~~gsL~~ 74 (424)
|+||.||.+.+ .+..+++|++... ..+.+|+.++.++ +||||+++++++.. ....+|||||++||+|.+
T Consensus 73 G~~g~V~~~~~~~~~~~vAiK~~~~~----~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~~~~~lv~E~~~gg~L~~ 148 (400)
T 1nxk_A 73 GINGKVLQIFNKRTQEKFALKMLQDC----PKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFS 148 (400)
T ss_dssp ETTEEEEEEEETTTCCEEEEEEEECS----HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEEECCCSEEHHH
T ss_pred ccCeEEEEEEECCCCCEEEEEEeCcc----hhHHHHHHHHHHhcCCCCcceEeEEEeecccCCcEEEEEEEeCCCCcHHH
Confidence 89999999987 4667888887533 4567888887554 89999999999876 556899999999999999
Q ss_pred HhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecC---CCCeEEccccccccCCCC---CccccCc
Q 014478 75 HLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDK---DGNPRLSSFGLMKNSRDG---KSYSTNL 148 (424)
Q Consensus 75 ~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~---~~~~kl~Dfg~~~~~~~~---~~~~gt~ 148 (424)
++.......+++.++..++.||+.||.|||+++ |+||||||+|||++. ++.+||+|||+++..... ....||+
T Consensus 149 ~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~-ivHrDlkp~Nill~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~gt~ 227 (400)
T 1nxk_A 149 RIQDRGDQAFTEREASEIMKSIGEAIQYLHSIN-IAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTP 227 (400)
T ss_dssp HHHCC---CCBHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEESSSSTTCCEEECCCTTCEECC-----------C
T ss_pred HHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCC-ccccCcCcceEEEecCCCCccEEEEecccccccCCCCccccCCCCC
Confidence 997644557999999999999999999999999 999999999999987 788999999999876533 3456899
Q ss_pred cCCCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhccc--CCCCCchhHHHHHHHHHHhcc
Q 014478 149 AFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSAL--EGHFSNDEGTELVRLASRCLQ 226 (424)
Q Consensus 149 ~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~li~~cl~ 226 (424)
.|+|||++.+..++.++|||||||++|+|++|..||...............+..... .......++.++.+||.+||+
T Consensus 228 ~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~ 307 (400)
T 1nxk_A 228 YYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLK 307 (400)
T ss_dssp TTCCGGGSCCCCSSSHHHHHHHHHHHHHHHHSSCSCCCCTTCSSCCSHHHHHHHTCCCCCTTTTTTSCHHHHHHHHTTSC
T ss_pred CccCHhhcCCCCCCCcccHHHHHHHHHHHHhCCCCCCCCccccccHHHHHHHHcCcccCCCcccccCCHHHHHHHHHHCC
Confidence 999999999889999999999999999999999888654211111111111111111 111224578899999999999
Q ss_pred cCcCCCCCHHHHHHHHH
Q 014478 227 SEARERPNAKSLVISLM 243 (424)
Q Consensus 227 ~dp~~Rps~~~~~~~l~ 243 (424)
.||++|||+.+++++..
T Consensus 308 ~dP~~Rpt~~eil~hp~ 324 (400)
T 1nxk_A 308 TEPTQRMTITEFMNHPW 324 (400)
T ss_dssp SSGGGSCCHHHHHHSHH
T ss_pred CChhHCcCHHHHhcCcc
Confidence 99999999999998754
|
| >3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-42 Score=324.71 Aligned_cols=243 Identities=19% Similarity=0.240 Sum_probs=190.9
Q ss_pred CCCcccceeeeec-----ceecccccCCC---chhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCe-----eeEEEecCC
Q 014478 2 GGRCSKFSICWFH-----CHLKSSVLESS---DLGETLNLEEAKAVGNLRSERLANLIGCCYEADE-----RLLVAEFMP 68 (424)
Q Consensus 2 G~~g~v~~~~~~~-----~~v~~~~~~~~---~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~-----~~lv~e~~~ 68 (424)
|++|.||.+.+.. ..+++|++... ....+.+.+|+.++++++||||+++++++..... .++||||++
T Consensus 45 G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~v~e~~~ 124 (313)
T 3brb_A 45 GEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMSSQGIPKPMVILPFMK 124 (313)
T ss_dssp -CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEC-------CEEEEEECCT
T ss_pred cCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCCCCeeeeeEEEeeccccCCcccEEEEeccc
Confidence 8999999998743 35777777543 2345678999999999999999999999987543 489999999
Q ss_pred CCCHHhHhcc----CCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCC---
Q 014478 69 NETLAKHLFH----WETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG--- 141 (424)
Q Consensus 69 ~gsL~~~l~~----~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~--- 141 (424)
+|+|.+++.. .....+++.+++.++.|++.||.|||+++ ++||||||+||+++.++.+||+|||+++.....
T Consensus 125 ~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~-ivH~dikp~NIli~~~~~~kl~Dfg~~~~~~~~~~~ 203 (313)
T 3brb_A 125 YGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNRN-FLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYY 203 (313)
T ss_dssp TCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHTTT-CCCCCCSGGGEEECTTSCEEECSCSCC---------
T ss_pred CCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHhCC-cccCCCCcceEEEcCCCcEEEeecCcceeccccccc
Confidence 9999999842 13457999999999999999999999999 999999999999999999999999998765432
Q ss_pred ---CccccCccCCCccccccCCCCCCcceehhHHHHHHHhh-CCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHHH
Q 014478 142 ---KSYSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTEL 217 (424)
Q Consensus 142 ---~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 217 (424)
....+++.|+|||.+.+..++.++||||||+++|+|++ |..||...... ..............+..+++++
T Consensus 204 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~l 278 (313)
T 3brb_A 204 RQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNH-----EMYDYLLHGHRLKQPEDCLDEL 278 (313)
T ss_dssp -------CCGGGSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGG-----GHHHHHHTTCCCCCBTTCCHHH
T ss_pred CcccccCCCccccCchhhcCCCccchhhhHHHHHHHHHHHhcCCCCCccCCHH-----HHHHHHHcCCCCCCCccccHHH
Confidence 23356789999999998889999999999999999999 77776653211 1122222223344566778899
Q ss_pred HHHHHHhcccCcCCCCCHHHHHHHHHHHhhhhh
Q 014478 218 VRLASRCLQSEARERPNAKSLVISLMSLQKEAE 250 (424)
Q Consensus 218 ~~li~~cl~~dp~~Rps~~~~~~~l~~~~~~~~ 250 (424)
.+++.+||..||.+|||+.+++++|+.+....+
T Consensus 279 ~~li~~~l~~dp~~Rps~~~l~~~L~~l~~~lp 311 (313)
T 3brb_A 279 YEIMYSCWRTDPLDRPTFSVLRLQLEKLLESLP 311 (313)
T ss_dssp HHHHHHTTCSSGGGSCCHHHHHHHHHHHHHHC-
T ss_pred HHHHHHHcCCChhhCcCHHHHHHHHHHHHHhcC
Confidence 999999999999999999999999999887643
|
| >3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A | Back alignment and structure |
|---|
Probab=100.00 E-value=8.1e-43 Score=322.86 Aligned_cols=237 Identities=16% Similarity=0.167 Sum_probs=188.0
Q ss_pred CCCcccceeee--ecceecccccCCCc---hhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHhHh
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESSD---LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHL 76 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~~---~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~l 76 (424)
|++|.||.+.+ .+..+++|++.... .....+.+|+.++++++||||+++++++.+++..++||||+++ +|.+.+
T Consensus 13 G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~-~l~~~~ 91 (292)
T 3o0g_A 13 GTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEFCDQ-DLKKYF 91 (292)
T ss_dssp CSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECCSE-EHHHHH
T ss_pred CCCeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeEEeEEEeCCEEEEEEecCCC-CHHHHH
Confidence 89999999988 46678888775433 2346788999999999999999999999999999999999986 666655
Q ss_pred ccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCC----CccccCccCCC
Q 014478 77 FHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG----KSYSTNLAFTP 152 (424)
Q Consensus 77 ~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~----~~~~gt~~y~a 152 (424)
.. ....+++.++..++.|++.||.|||+++ |+||||||+|||++.++.+||+|||+++..... ....||+.|+|
T Consensus 92 ~~-~~~~l~~~~~~~~~~ql~~~l~~lH~~~-ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~t~~y~a 169 (292)
T 3o0g_A 92 DS-CNGDLDPEIVKSFLFQLLKGLGFCHSRN-VLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCYSAEVVTLWYRP 169 (292)
T ss_dssp HH-TTTCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEECTTSCEEECCCTTCEECCSCCSCCCSCCSCGGGCC
T ss_pred Hh-CCCCCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCCHHHEEEcCCCCEEEeecccceecCCccccccCCccccCCcC
Confidence 44 3567999999999999999999999999 999999999999999999999999999865432 34567999999
Q ss_pred ccccccCC-CCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhcc------------------------cCC
Q 014478 153 PEYMRTGR-VTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSA------------------------LEG 207 (424)
Q Consensus 153 PE~~~~~~-~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~------------------------~~~ 207 (424)
||++.+.. ++.++|||||||++|+|++|..|+.................... ...
T Consensus 170 PE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (292)
T 3o0g_A 170 PDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKPYPMYPATTSLV 249 (292)
T ss_dssp HHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHHHHHHHCCCCTTTCTTGGGSTTCCCCCCCCTTCCCT
T ss_pred hHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChhhhhhhcccccccccccccCCcchh
Confidence 99998766 79999999999999999998877543211111111111100000 001
Q ss_pred CCCchhHHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 014478 208 HFSNDEGTELVRLASRCLQSEARERPNAKSLVIS 241 (424)
Q Consensus 208 ~~~~~~~~~l~~li~~cl~~dp~~Rps~~~~~~~ 241 (424)
.....+++++.+||.+||+.||++|||+++++++
T Consensus 250 ~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 283 (292)
T 3o0g_A 250 NVVPKLNATGRDLLQNLLKCNPVQRISAEEALQH 283 (292)
T ss_dssp TTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred hcccccChHHHHHHHHHhccChhhCCCHHHHhcC
Confidence 1223467899999999999999999999999864
|
| >1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-42 Score=327.32 Aligned_cols=242 Identities=19% Similarity=0.224 Sum_probs=197.0
Q ss_pred CCCcccceeeeecc----eecccccCC--CchhhhHHHHHHHHHhcC-CCcCcceeEEEEEeCCeeeEEEecCCCCCHHh
Q 014478 2 GGRCSKFSICWFHC----HLKSSVLES--SDLGETLNLEEAKAVGNL-RSERLANLIGCCYEADERLLVAEFMPNETLAK 74 (424)
Q Consensus 2 G~~g~v~~~~~~~~----~v~~~~~~~--~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~ 74 (424)
|++|.||.+.+... .+++|.+.. .....+.+.+|+++++++ +||||+++++++...+..++||||+++|+|.+
T Consensus 36 G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~ 115 (327)
T 1fvr_A 36 GNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLD 115 (327)
T ss_dssp GGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEEEEECCCTTCBHHH
T ss_pred CCCceEEEEEEccCCcccceeeeeeccccchHHHHHHHHHHHHHHhccCCCchhhhceeeeeCCceEEEEecCCCCCHHH
Confidence 89999999988443 235565543 233466789999999999 89999999999999999999999999999999
Q ss_pred HhccCC--------------CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCC
Q 014478 75 HLFHWE--------------TQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRD 140 (424)
Q Consensus 75 ~l~~~~--------------~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~ 140 (424)
++.... ...+++.+++.++.||+.||.|||+++ ++||||||+|||++.++.+||+|||+++....
T Consensus 116 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~-ivH~dlkp~NIl~~~~~~~kL~Dfg~~~~~~~ 194 (327)
T 1fvr_A 116 FLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQ-FIHRDLAARNILVGENYVAKIADFGLSRGQEV 194 (327)
T ss_dssp HHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEECGGGCEEECCTTCEESSCE
T ss_pred HHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCC-ccCCCCccceEEEcCCCeEEEcccCcCccccc
Confidence 996522 247999999999999999999999999 99999999999999999999999999875432
Q ss_pred ---CCccccCccCCCccccccCCCCCCcceehhHHHHHHHhh-CCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHH
Q 014478 141 ---GKSYSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTE 216 (424)
Q Consensus 141 ---~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (424)
.....+++.|+|||++.+..++.++|||||||++|+|++ |..||....... ....+........+..++++
T Consensus 195 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~~-----~~~~~~~~~~~~~~~~~~~~ 269 (327)
T 1fvr_A 195 YVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAE-----LYEKLPQGYRLEKPLNCDDE 269 (327)
T ss_dssp ECCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCHHH-----HHHHGGGTCCCCCCTTBCHH
T ss_pred cccccCCCCCccccChhhhccccCCchhcchHHHHHHHHHHcCCCCCCCCCcHHH-----HHHHhhcCCCCCCCCCCCHH
Confidence 233456789999999998889999999999999999998 988876542221 12222223334456677889
Q ss_pred HHHHHHHhcccCcCCCCCHHHHHHHHHHHhhhh
Q 014478 217 LVRLASRCLQSEARERPNAKSLVISLMSLQKEA 249 (424)
Q Consensus 217 l~~li~~cl~~dp~~Rps~~~~~~~l~~~~~~~ 249 (424)
+.++|.+||..||.+|||+.+++++|..+....
T Consensus 270 l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~ 302 (327)
T 1fvr_A 270 VYDLMRQCWREKPYERPSFAQILVSLNRMLEER 302 (327)
T ss_dssp HHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSS
T ss_pred HHHHHHHHccCChhhCcCHHHHHHHHHHHHHhh
Confidence 999999999999999999999999999988764
|
| >3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-43 Score=333.37 Aligned_cols=232 Identities=16% Similarity=0.171 Sum_probs=193.9
Q ss_pred CCCcccceeee--ecceecccccCCCc----hhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHhH
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESSD----LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKH 75 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~~----~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~ 75 (424)
|+||.||.+.+ .+..|++|++.... .....+.+|+.+++.++||||+++++++......++||||+ +|+|.++
T Consensus 20 G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~E~~-~g~l~~~ 98 (336)
T 3h4j_B 20 GSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDIVMVIEYA-GGELFDY 98 (336)
T ss_dssp ETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEECCC-CEEHHHH
T ss_pred CCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEECC-CCcHHHH
Confidence 89999999997 66778888775432 22457889999999999999999999999999999999999 6799998
Q ss_pred hccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCC---CccccCccCCC
Q 014478 76 LFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG---KSYSTNLAFTP 152 (424)
Q Consensus 76 l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~---~~~~gt~~y~a 152 (424)
+.. ...+++.+++.++.|++.||.|||+++ |+||||||+|||++.++.+||+|||++...... ....||+.|+|
T Consensus 99 l~~--~~~l~~~~~~~i~~qi~~aL~~LH~~g-ivH~Dlkp~NIll~~~~~~kl~DFG~s~~~~~~~~~~~~~gt~~y~a 175 (336)
T 3h4j_B 99 IVE--KKRMTEDEGRRFFQQIICAIEYCHRHK-IVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGNFLKTSCGSPNYAA 175 (336)
T ss_dssp HHH--HCSCCHHHHHHHHHHHHHHHHHHHHHT-CCCCCCSTTTEEECTTCCEEECCSSCTBTTTTSBTTCCCTTSTTTSC
T ss_pred HHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-eEecCCchhhEEEcCCCCEEEEEeccceeccCCcccccccCCcCcCC
Confidence 865 457999999999999999999999999 999999999999999999999999999866543 34578999999
Q ss_pred ccccccCCC-CCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHHHHHHHHHhcccCcCC
Q 014478 153 PEYMRTGRV-TPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARE 231 (424)
Q Consensus 153 PE~~~~~~~-~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~ 231 (424)
||++.+..+ +.++|||||||++|+|++|..||........ ...+. ......|..+++++.++|.+||+.||.+
T Consensus 176 PE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~-----~~~i~-~~~~~~p~~~s~~~~~li~~~L~~dP~~ 249 (336)
T 3h4j_B 176 PEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNL-----FKKVN-SCVYVMPDFLSPGAQSLIRRMIVADPMQ 249 (336)
T ss_dssp GGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCSSSTTC-----BCCCC-SSCCCCCTTSCHHHHHHHHTTSCSSGGG
T ss_pred HHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCCccHHHH-----HHHHH-cCCCCCcccCCHHHHHHHHHHcCCChhH
Confidence 999997775 6899999999999999999988865321111 11111 1122345667889999999999999999
Q ss_pred CCCHHHHHHHHH
Q 014478 232 RPNAKSLVISLM 243 (424)
Q Consensus 232 Rps~~~~~~~l~ 243 (424)
|||+++++++-.
T Consensus 250 Rpt~~eil~hp~ 261 (336)
T 3h4j_B 250 RITIQEIRRDPW 261 (336)
T ss_dssp SCCHHHHTTCHH
T ss_pred CcCHHHHHhChh
Confidence 999999987643
|
| >3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-43 Score=336.65 Aligned_cols=243 Identities=15% Similarity=0.138 Sum_probs=191.6
Q ss_pred CCCcccceeeeec-------ceecccccCCCchh------------hhHHHHHHHHHhcCCCcCcceeEEEEEeC----C
Q 014478 2 GGRCSKFSICWFH-------CHLKSSVLESSDLG------------ETLNLEEAKAVGNLRSERLANLIGCCYEA----D 58 (424)
Q Consensus 2 G~~g~v~~~~~~~-------~~v~~~~~~~~~~~------------~~~~~~E~~~l~~l~h~~iv~~~~~~~~~----~ 58 (424)
|+||.||.+.+.. ..+++|++...... ...+..|+..+..++||||+++++++... .
T Consensus 46 G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~~ 125 (364)
T 3op5_A 46 GGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPKYWGSGLHDKNGKS 125 (364)
T ss_dssp C-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCCEEEEEEEEETTEE
T ss_pred CCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCeEEeeeeeccCCcc
Confidence 8999999998843 45777776544311 12344566677888999999999999875 4
Q ss_pred eeeEEEecCCCCCHHhHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeec--CCCCeEEccccccc
Q 014478 59 ERLLVAEFMPNETLAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFD--KDGNPRLSSFGLMK 136 (424)
Q Consensus 59 ~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~--~~~~~kl~Dfg~~~ 136 (424)
..+|||||+ |++|.+++.. ....+++.+++.++.||+.||.|||+++ |+||||||+|||++ .++.+||+|||+++
T Consensus 126 ~~~lv~e~~-g~~L~~~~~~-~~~~l~~~~~~~i~~qi~~~l~~lH~~~-iiHrDlkp~Nill~~~~~~~~kl~DFG~a~ 202 (364)
T 3op5_A 126 YRFMIMDRF-GSDLQKIYEA-NAKRFSRKTVLQLSLRILDILEYIHEHE-YVHGDIKASNLLLNYKNPDQVYLVDYGLAY 202 (364)
T ss_dssp EEEEEEECE-EEEHHHHHHH-TTSCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEEESSCTTCEEECCCTTCE
T ss_pred eEEEEEeCC-CCCHHHHHHh-ccCCCCHHHHHHHHHHHHHHHHHHHHCC-eEEecCCHHHEEEecCCCCeEEEEECCcce
Confidence 478999999 9999999975 3467999999999999999999999999 99999999999998 88999999999997
Q ss_pred cCCCC-----------CccccCccCCCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhh--------hhh
Q 014478 137 NSRDG-----------KSYSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRS--------KNF 197 (424)
Q Consensus 137 ~~~~~-----------~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~--------~~~ 197 (424)
..... ....||+.|+|||++.+..++.++|||||||++|||++|+.||.......... ...
T Consensus 203 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~ 282 (364)
T 3op5_A 203 RYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPWEDNLKDPKYVRDSKIRYRENI 282 (364)
T ss_dssp ESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTTCHHHHHHHHHHHHHCH
T ss_pred ecccCCcccccccCcccccCCCCCccCHHHhCCCCCCchhhHHHHHHHHHHHHhCCCCccccccCHHHHHHHHHHhhhhH
Confidence 64321 23348999999999998889999999999999999999998887531111100 111
Q ss_pred hHhhhcccCCCCCchhHHHHHHHHHHhcccCcCCCCCHHHHHHHHHHHhhhhh
Q 014478 198 LLLMDSALEGHFSNDEGTELVRLASRCLQSEARERPNAKSLVISLMSLQKEAE 250 (424)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~~~~~l~~~~~~~~ 250 (424)
....+... .+..+++++.+++.+||..||.+|||+.++++.|+.+.....
T Consensus 283 ~~~~~~~~---~~~~~~~~~~~li~~cl~~~p~~RP~~~~l~~~l~~~~~~~~ 332 (364)
T 3op5_A 283 ASLMDKCF---PAANAPGEIAKYMETVKLLDYTEKPLYENLRDILLQGLKAIG 332 (364)
T ss_dssp HHHHHHHS---CTTCCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHTT
T ss_pred HHHHHHhc---ccccCHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHcC
Confidence 11112111 123457799999999999999999999999999999887654
|
| >3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.9e-43 Score=328.48 Aligned_cols=239 Identities=16% Similarity=0.273 Sum_probs=193.9
Q ss_pred CCCcccceeeee--ccee----cccccCC--CchhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHH
Q 014478 2 GGRCSKFSICWF--HCHL----KSSVLES--SDLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLA 73 (424)
Q Consensus 2 G~~g~v~~~~~~--~~~v----~~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~ 73 (424)
|+||.||.+.+. +..+ ++|.+.. .....+.+.+|+.++++++||||++++++|..+. .++||||+++|+|.
T Consensus 26 G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~-~~~v~~~~~~g~L~ 104 (327)
T 3lzb_A 26 GAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQLITQLMPFGCLL 104 (327)
T ss_dssp CSSEEEEEEEECCTTCSCCEEEEEEEECCCSSCCCHHHHHHHHHHHTTCCBTTBCCCCEEEESSS-EEEEECCCSSCBHH
T ss_pred CCCeEEEEEEEcCCCceEEEEEEEEeeccccCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEecCC-ceEEEEecCCCcHH
Confidence 899999999883 3333 3444322 3345678999999999999999999999998764 78999999999999
Q ss_pred hHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCC------CccccC
Q 014478 74 KHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG------KSYSTN 147 (424)
Q Consensus 74 ~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~------~~~~gt 147 (424)
+++.. ....+++..++.++.|++.||.|||+++ |+||||||+|||++.++.+||+|||+++..... ....+|
T Consensus 105 ~~l~~-~~~~~~~~~~~~i~~qi~~aL~~LH~~~-ivH~Dikp~NIl~~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~t 182 (327)
T 3lzb_A 105 DYVRE-HKDNIGSQYLLNWCVQIAKGMNYLEDRR-LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 182 (327)
T ss_dssp HHHHH-TTTCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEEEETTEEEECCTTC----------------CCC
T ss_pred HHHHh-cCCCCCHHHHHHHHHHHHHHHHHHhhCC-CcCCCCCHHHEEEcCCCCEEEccCcceeEccCccccccccCCCcc
Confidence 99975 3567999999999999999999999999 999999999999999999999999999865432 123457
Q ss_pred ccCCCccccccCCCCCCcceehhHHHHHHHhh-CCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHHHHHHHHHhcc
Q 014478 148 LAFTPPEYMRTGRVTPESVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQ 226 (424)
Q Consensus 148 ~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~ 226 (424)
+.|+|||++.+..++.++|||||||++|+|++ |..||.... .......+........+..++.++.+++.+||.
T Consensus 183 ~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~ 257 (327)
T 3lzb_A 183 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIP-----ASEISSILEKGERLPQPPICTIDVYMIMRKCWM 257 (327)
T ss_dssp GGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCC-----GGGHHHHHHTTCCCCCCTTBCHHHHHHHHHHTC
T ss_pred ccccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCCCCCCCCC-----HHHHHHHHHcCCCCCCCccCCHHHHHHHHHHcC
Confidence 78999999999899999999999999999999 888876532 222233333444445566788899999999999
Q ss_pred cCcCCCCCHHHHHHHHHHHhhh
Q 014478 227 SEARERPNAKSLVISLMSLQKE 248 (424)
Q Consensus 227 ~dp~~Rps~~~~~~~l~~~~~~ 248 (424)
.||.+|||+.++++.|+.+...
T Consensus 258 ~dp~~Rps~~ell~~L~~~~~~ 279 (327)
T 3lzb_A 258 IDADSRPKFRELIIEFSKMARD 279 (327)
T ss_dssp SSGGGSCCHHHHHHHHHHHHTS
T ss_pred CChhHCcCHHHHHHHHHHHHhC
Confidence 9999999999999999998764
|
| >1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7e-43 Score=324.11 Aligned_cols=245 Identities=12% Similarity=0.056 Sum_probs=198.9
Q ss_pred CCCcccceeee--ecceecccccCCCchhhhHHHHHHHHHhcC-CCcCcceeEEEEEeCCeeeEEEecCCCCCHHhHhcc
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESSDLGETLNLEEAKAVGNL-RSERLANLIGCCYEADERLLVAEFMPNETLAKHLFH 78 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~ 78 (424)
|++|.||.+.+ .+..+++|++.... ....+.+|+++++.+ +|+||+++++++..+...++||||+ +++|.+++..
T Consensus 21 G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~ 98 (298)
T 1csn_A 21 GSFGVIFEGTNLLNNQQVAIKFEPRRS-DAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVIDLL-GPSLEDLLDL 98 (298)
T ss_dssp CSSCEEEEEEETTTTEEEEEEEEECCT-TSCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEEECC-CCBHHHHHHH
T ss_pred cCCEEEEEEEECCCCcEEEEEEeccCC-ccHHHHHHHHHHHHHhcCCCCCeEEeecCCCceeEEEEEec-CCCHHHHHHH
Confidence 89999999985 67788888775443 345788999999999 8999999999999999999999999 9999999975
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCC-----eEEccccccccCCCC-----------C
Q 014478 79 WETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGN-----PRLSSFGLMKNSRDG-----------K 142 (424)
Q Consensus 79 ~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~-----~kl~Dfg~~~~~~~~-----------~ 142 (424)
.+.++++.+++.++.||+.||.|||+++ |+||||||+|||++.++. +||+|||+++..... .
T Consensus 99 -~~~~~~~~~~~~i~~qi~~~l~~lH~~~-ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~ 176 (298)
T 1csn_A 99 -CGRKFSVKTVAMAAKQMLARVQSIHEKS-LVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPVTKQHIPYREKK 176 (298)
T ss_dssp -TTTCCCHHHHHHHHHHHHHHHHHHHTTT-EECCCCCGGGEEECCSSSTTTTCEEECCCTTCEESBCTTTCCBCCCCCCC
T ss_pred -hccCCCHHHHHHHHHHHHHHHHHHHhCC-EecCCCCHHHEEeccCCCCCCCeEEEEECccccccccccccccccccCcc
Confidence 3456999999999999999999999999 999999999999987776 999999999865432 2
Q ss_pred ccccCccCCCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhH--HHhhhhhhHhhhcccCCCCCchhHHHHHHH
Q 014478 143 SYSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALD--LIRSKNFLLLMDSALEGHFSNDEGTELVRL 220 (424)
Q Consensus 143 ~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 220 (424)
...||+.|+|||++.+..++.++|||||||++|+|++|+.||...... ......................+++++.++
T Consensus 177 ~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 256 (298)
T 1csn_A 177 NLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQSTPLRELCAGFPEEFYKY 256 (298)
T ss_dssp CCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHHHHHHHHHHSCHHHHTTTSCHHHHHH
T ss_pred CCCCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHcCCCCcchhhccccHHHHHHHHhhccCccHHHHHhhCcHHHHHH
Confidence 346899999999999888999999999999999999999888753110 000000100001111111223567899999
Q ss_pred HHHhcccCcCCCCCHHHHHHHHHHHhhhhh
Q 014478 221 ASRCLQSEARERPNAKSLVISLMSLQKEAE 250 (424)
Q Consensus 221 i~~cl~~dp~~Rps~~~~~~~l~~~~~~~~ 250 (424)
+.+||+.||++|||++++++.|+.+.+...
T Consensus 257 i~~~l~~dp~~RP~~~~l~~~l~~~~~~~~ 286 (298)
T 1csn_A 257 MHYARNLAFDATPDYDYLQGLFSKVLERLN 286 (298)
T ss_dssp HHHHHHCCTTCCCCHHHHHHHHHHHHHHTT
T ss_pred HHHHhcCCcccCCCHHHHHHHHHHHHHhcC
Confidence 999999999999999999999999887644
|
| >2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-43 Score=333.54 Aligned_cols=242 Identities=19% Similarity=0.286 Sum_probs=199.7
Q ss_pred CCCcccceeeeec-------ceecccccCCCc--hhhhHHHHHHHHHhcC-CCcCcceeEEEEEeCCeeeEEEecCCCCC
Q 014478 2 GGRCSKFSICWFH-------CHLKSSVLESSD--LGETLNLEEAKAVGNL-RSERLANLIGCCYEADERLLVAEFMPNET 71 (424)
Q Consensus 2 G~~g~v~~~~~~~-------~~v~~~~~~~~~--~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~~~~gs 71 (424)
|+||.||.+.+.+ ..+++|++.... ...+.+.+|+++++.+ +||||+++++++..++..++||||+++|+
T Consensus 57 G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~g~ 136 (333)
T 2i1m_A 57 GAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGD 136 (333)
T ss_dssp CSSEEEEEEEETTCSSSCCCCEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCTTEE
T ss_pred CCCcceEEEEecCCCcccchhHHHHHhcccccChHHHHHHHHHHHHHHhhcCCCCeeeEEEEEecCCceEEEEecCCCCc
Confidence 8999999998743 246777665433 3467789999999999 89999999999999999999999999999
Q ss_pred HHhHhccCC------------CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCC
Q 014478 72 LAKHLFHWE------------TQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSR 139 (424)
Q Consensus 72 L~~~l~~~~------------~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~ 139 (424)
|.+++.... ...+++..++.++.|++.||.|||+++ |+||||||+|||++.++.+||+|||+++...
T Consensus 137 L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~-ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~ 215 (333)
T 2i1m_A 137 LLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASKN-CIHRDVAARNVLLTNGHVAKIGDFGLARDIM 215 (333)
T ss_dssp HHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGCEEEGGGEEEBCCCGGGCCGG
T ss_pred HHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhcCC-cccCCcccceEEECCCCeEEECccccccccc
Confidence 999986421 346899999999999999999999999 9999999999999999999999999998653
Q ss_pred CC------CccccCccCCCccccccCCCCCCcceehhHHHHHHHhh-CCCCCCchhhHHHhhhhhhHhhhcccCCCCCch
Q 014478 140 DG------KSYSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKNFLLLMDSALEGHFSND 212 (424)
Q Consensus 140 ~~------~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 212 (424)
.. ....+|+.|+|||++.+..++.++|||||||++|+|++ |..||..... ................+..
T Consensus 216 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~----~~~~~~~~~~~~~~~~~~~ 291 (333)
T 2i1m_A 216 NDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILV----NSKFYKLVKDGYQMAQPAF 291 (333)
T ss_dssp GCTTSEECSSCEECGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCS----SHHHHHHHHHTCCCCCCTT
T ss_pred cccceeecCCCCCCccccCHHHhccCCCChHHHHHHHHHHHHHHHcCCCCCCcccch----hHHHHHHHhcCCCCCCCCC
Confidence 32 22346788999999998889999999999999999998 8777765321 1122223333334445566
Q ss_pred hHHHHHHHHHHhcccCcCCCCCHHHHHHHHHHHhhh
Q 014478 213 EGTELVRLASRCLQSEARERPNAKSLVISLMSLQKE 248 (424)
Q Consensus 213 ~~~~l~~li~~cl~~dp~~Rps~~~~~~~l~~~~~~ 248 (424)
+++++.+++.+||+.||.+|||+.++++.|+.+..+
T Consensus 292 ~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~~ 327 (333)
T 2i1m_A 292 APKNIYSIMQACWALEPTHRPTFQQICSFLQEQAQE 327 (333)
T ss_dssp CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHhccChhhCcCHHHHHHHHHHHHHh
Confidence 788999999999999999999999999999987664
|
| >3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.5e-43 Score=337.26 Aligned_cols=238 Identities=15% Similarity=0.119 Sum_probs=189.8
Q ss_pred CCcccceeee--ecceecccccCCCc---hhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHhHhc
Q 014478 3 GRCSKFSICW--FHCHLKSSVLESSD---LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLF 77 (424)
Q Consensus 3 ~~g~v~~~~~--~~~~v~~~~~~~~~---~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~ 77 (424)
|+|.||.+.+ .+..|++|++.... ...+.+.+|+++++.++||||+++++++..++..++||||+++|+|.+++.
T Consensus 39 ~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~ 118 (389)
T 3gni_B 39 DLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFMAYGSAKDLIC 118 (389)
T ss_dssp TTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCTTCBHHHHHH
T ss_pred CceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEECCEEEEEEEccCCCCHHHHHh
Confidence 8999999998 47778888875433 345678889999999999999999999999999999999999999999997
Q ss_pred cCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCC-----------CCcccc
Q 014478 78 HWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRD-----------GKSYST 146 (424)
Q Consensus 78 ~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~-----------~~~~~g 146 (424)
......+++..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||.+..... .....|
T Consensus 119 ~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~-ivHrDlkp~NIll~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~g 197 (389)
T 3gni_B 119 THFMDGMNELAIAYILQGVLKALDYIHHMG-YVHRSVKASHILISVDGKVYLSGLRSNLSMISHGQRQRVVHDFPKYSVK 197 (389)
T ss_dssp HTCTTCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEECTTCCEEECCGGGCEECEETTEECSCBCCCCTTCTT
T ss_pred hhcccCCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCCHHHEEEcCCCCEEEcccccceeeccccccccccccccccccc
Confidence 655577999999999999999999999999 99999999999999999999999998754321 123468
Q ss_pred CccCCCcccccc--CCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhh-----------------------
Q 014478 147 NLAFTPPEYMRT--GRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLM----------------------- 201 (424)
Q Consensus 147 t~~y~aPE~~~~--~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~----------------------- 201 (424)
|+.|+|||++.+ ..++.++|||||||++|+|++|+.||.................
T Consensus 198 t~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (389)
T 3gni_B 198 VLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLLDTSTIPAEELTMSPSRSVA 277 (389)
T ss_dssp TGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTTCCSTTHHHHC----------------------------
T ss_pred cccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhcCCCCcccccccccccccccccccccc
Confidence 899999999987 5789999999999999999999988865321111000000000
Q ss_pred -----------------hcccCCCCCchhHHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 014478 202 -----------------DSALEGHFSNDEGTELVRLASRCLQSEARERPNAKSLVIS 241 (424)
Q Consensus 202 -----------------~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~~~~~ 241 (424)
........+..+++++.+||.+||+.||++|||+.+++++
T Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~ell~h 334 (389)
T 3gni_B 278 NSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDARPSASTLLNH 334 (389)
T ss_dssp ----------------------------CCHHHHHHHHHHTCSCTTTSCCHHHHTTS
T ss_pred ccccccccccCccccccCCCCCCccccccCHHHHHHHHHHhhcCcccCCCHHHHhcC
Confidence 0000111334467789999999999999999999999976
|
| >2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-42 Score=323.51 Aligned_cols=249 Identities=14% Similarity=0.172 Sum_probs=192.1
Q ss_pred CCCcccceeee--ecceecccccCC----CchhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHhH
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLES----SDLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKH 75 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~----~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~ 75 (424)
|++|.||.+.+ .+..+++|++.. .......+.+|+.++++++||||+++++++...+..++||||+++|+|.++
T Consensus 43 G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~ 122 (310)
T 2wqm_A 43 GQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVLELADAGDLSRM 122 (310)
T ss_dssp C--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCCSCBHHHH
T ss_pred CCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCcEEEEEecCCCCCHHHH
Confidence 89999999986 567788887753 233467788999999999999999999999999999999999999999999
Q ss_pred hccC--CCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCC----CccccCcc
Q 014478 76 LFHW--ETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG----KSYSTNLA 149 (424)
Q Consensus 76 l~~~--~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~----~~~~gt~~ 149 (424)
+... ....+++..++.++.|++.||.|||+++ ++||||||+||+++.++.+||+|||++...... ....||+.
T Consensus 123 l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~-i~H~dl~p~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~ 201 (310)
T 2wqm_A 123 IKHFKKQKRLIPERTVWKYFVQLCSALEHMHSRR-VMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSLVGTPY 201 (310)
T ss_dssp HHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEECTTSCEEECCC------------------CCS
T ss_pred HHHhcccccCCCHHHHHHHHHHHHHHHHHHhhCC-eeCCCCcHHHEEEcCCCCEEEEeccceeeecCCCccccccCCCee
Confidence 8531 3467899999999999999999999999 999999999999999999999999998765432 23468999
Q ss_pred CCCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHHHHHHHHHhcccCc
Q 014478 150 FTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEA 229 (424)
Q Consensus 150 y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp 229 (424)
|+|||++.+..++.++||||||+++|+|++|..||.......... .............+..+++++.+++.+||..||
T Consensus 202 y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp 279 (310)
T 2wqm_A 202 YMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSL--CKKIEQCDYPPLPSDHYSEELRQLVNMCINPDP 279 (310)
T ss_dssp SCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTC---CCHHHH--HHHHHTTCSCCCCTTTSCHHHHHHHHHHTCSSG
T ss_pred EeChHHhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchhHHHH--HHHhhcccCCCCcccccCHHHHHHHHHHcCCCh
Confidence 999999998889999999999999999999998886532111111 111111112222234578899999999999999
Q ss_pred CCCCCHHHHHHHHHHHhhhhhcCC
Q 014478 230 RERPNAKSLVISLMSLQKEAEQVP 253 (424)
Q Consensus 230 ~~Rps~~~~~~~l~~~~~~~~~~~ 253 (424)
++|||+.++++.|+++......++
T Consensus 280 ~~Rps~~~il~~l~~l~~~~~~~~ 303 (310)
T 2wqm_A 280 EKRPDVTYVYDVAKRMHACTASSL 303 (310)
T ss_dssp GGSCCHHHHHHHHHHHHHHHC---
T ss_pred hhCCCHHHHHHHHHHHHHhhhhhh
Confidence 999999999999999987755443
|
| >3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.1e-43 Score=325.39 Aligned_cols=236 Identities=17% Similarity=0.177 Sum_probs=187.8
Q ss_pred CCCcccceeee-ecceecccccCCCch---hhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHhHhc
Q 014478 2 GGRCSKFSICW-FHCHLKSSVLESSDL---GETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLF 77 (424)
Q Consensus 2 G~~g~v~~~~~-~~~~v~~~~~~~~~~---~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~ 77 (424)
|+||.||.+.+ .+..+++|++..... ....+.+|++++++++||||+++++++..+...++||||+++ +|.+++.
T Consensus 32 G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~-~l~~~~~ 110 (311)
T 3niz_A 32 GTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLTLVFEFMEK-DLKKVLD 110 (311)
T ss_dssp CSSCEEEEEEETTSCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCSSCEEEEEECCSE-EHHHHHH
T ss_pred CCCeEEEEEEECCCCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeeeeEEccCCEEEEEEcCCCC-CHHHHHH
Confidence 89999999988 567788887754332 246788999999999999999999999999999999999985 8888876
Q ss_pred cCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCC----CccccCccCCCc
Q 014478 78 HWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG----KSYSTNLAFTPP 153 (424)
Q Consensus 78 ~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~----~~~~gt~~y~aP 153 (424)
. ....+++.++..++.|++.||.|||+++ |+||||||+|||++.++.+||+|||+++..... ....+|+.|+||
T Consensus 111 ~-~~~~~~~~~~~~~~~qi~~~l~~LH~~~-ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~t~~y~aP 188 (311)
T 3niz_A 111 E-NKTGLQDSQIKIYLYQLLRGVAHCHQHR-ILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVVTLWYRAP 188 (311)
T ss_dssp T-CTTCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEECTTCCEEECCCTTCEETTSCCC---CCCCCCTTCCH
T ss_pred h-ccCCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCchHhEEECCCCCEEEccCcCceecCCCcccccCCcccCCcCCH
Confidence 5 3456999999999999999999999999 999999999999999999999999999865422 334689999999
Q ss_pred ccccc-CCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhcccCC-------------------------
Q 014478 154 EYMRT-GRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEG------------------------- 207 (424)
Q Consensus 154 E~~~~-~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------------- 207 (424)
|++.+ ..++.++|||||||++|+|++|+.||+........... ..........
T Consensus 189 E~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (311)
T 3niz_A 189 DVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKI-FSILGTPNPREWPQVQELPLWKQRTFQVFEKKPWS 267 (311)
T ss_dssp HHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSTTTHHHHH-HHHHCCCCTTTSGGGTTSHHHHSCCCCCCCCCCHH
T ss_pred HHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCCChHHHHHHH-HHHHCCCChHHhhhhhccchhhhcccccccCCcHH
Confidence 99876 45899999999999999999999888764221111110 0000000000
Q ss_pred CCCchhHHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 014478 208 HFSNDEGTELVRLASRCLQSEARERPNAKSLVIS 241 (424)
Q Consensus 208 ~~~~~~~~~l~~li~~cl~~dp~~Rps~~~~~~~ 241 (424)
.....+++++.+||.+||+.||++|||+++++++
T Consensus 268 ~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 301 (311)
T 3niz_A 268 SIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNH 301 (311)
T ss_dssp HHSTTCCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred HhCcccCHHHHHHHHHHcCCChhHCCCHHHHhcC
Confidence 0112356789999999999999999999999864
|
| >1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-43 Score=333.50 Aligned_cols=231 Identities=16% Similarity=0.230 Sum_probs=194.0
Q ss_pred CCCcccceeee--ecceecccccCCCc----hhhhHHHHHHHHHhcC-CCcCcceeEEEEEeCCeeeEEEecCCCCCHHh
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESSD----LGETLNLEEAKAVGNL-RSERLANLIGCCYEADERLLVAEFMPNETLAK 74 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~~----~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~ 74 (424)
|+||.||.+.+ .+..+++|++.... .....+..|..++..+ +||||+++++++.+.+..++||||++||+|.+
T Consensus 28 G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~~~~lv~E~~~gg~L~~ 107 (345)
T 1xjd_A 28 GSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMY 107 (345)
T ss_dssp CSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEEEECCTTCBHHH
T ss_pred CCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCCEEEEEEeCCCCCcHHH
Confidence 89999999998 46778888875432 2355678899999887 99999999999999999999999999999999
Q ss_pred HhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCC----CCccccCccC
Q 014478 75 HLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRD----GKSYSTNLAF 150 (424)
Q Consensus 75 ~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~----~~~~~gt~~y 150 (424)
++.. ...+++.++..++.||+.||.|||+++ |+||||||+|||++.+|.+||+|||+++.... .....||+.|
T Consensus 108 ~l~~--~~~~~~~~~~~~~~qi~~aL~~LH~~~-ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~~~~~~~~gt~~y 184 (345)
T 1xjd_A 108 HIQS--CHKFDLSRATFYAAEIILGLQFLHSKG-IVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNTFCGTPDY 184 (345)
T ss_dssp HHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTT-CBCCCCCGGGEEECTTSCEEECCCTTCBCCCCTTCCBCCCCSCGGG
T ss_pred HHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-eEeCCCChhhEEECCCCCEEEeEChhhhhcccCCCcccCCCCCccc
Confidence 9965 457999999999999999999999999 99999999999999999999999999986432 2345789999
Q ss_pred CCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHHHHHHHHHhcccCcC
Q 014478 151 TPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEAR 230 (424)
Q Consensus 151 ~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~ 230 (424)
+|||++.+..++.++|||||||++|||++|..||......... ..+... ....+..+++++.++|.+||..||+
T Consensus 185 ~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~----~~i~~~--~~~~p~~~s~~~~~li~~lL~~dp~ 258 (345)
T 1xjd_A 185 IAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELF----HSIRMD--NPFYPRWLEKEAKDLLVKLFVREPE 258 (345)
T ss_dssp CCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHH----HHHHHC--CCCCCTTSCHHHHHHHHHHSCSSGG
T ss_pred CChhhhcCCCCCChhhhHHHHHHHHHHhcCCCCCCCCCHHHHH----HHHHhC--CCCCCcccCHHHHHHHHHHhcCCHh
Confidence 9999999888999999999999999999999988764322111 111111 2234566788999999999999999
Q ss_pred CCCCHH-HHHHH
Q 014478 231 ERPNAK-SLVIS 241 (424)
Q Consensus 231 ~Rps~~-~~~~~ 241 (424)
+||++. +++++
T Consensus 259 ~R~~~~~~i~~h 270 (345)
T 1xjd_A 259 KRLGVRGDIRQH 270 (345)
T ss_dssp GSBTTBSCGGGS
T ss_pred HcCCChHHHHcC
Confidence 999997 66543
|
| >2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.9e-43 Score=332.35 Aligned_cols=233 Identities=16% Similarity=0.180 Sum_probs=179.8
Q ss_pred CCCcccceeeee--cceecccccCCCchhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHhHhccC
Q 014478 2 GGRCSKFSICWF--HCHLKSSVLESSDLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHW 79 (424)
Q Consensus 2 G~~g~v~~~~~~--~~~v~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~ 79 (424)
|++|.||.+.+. +..|++|++.... ..+.+.+|++++++++||||+++++++...+..++||||+++|+|.+++..
T Consensus 64 G~~g~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~- 141 (349)
T 2w4o_A 64 GATSIVYRCKQKGTQKPYALKVLKKTV-DKKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISLVLELVTGGELFDRIVE- 141 (349)
T ss_dssp CSSEEEEEEEETTTCCEEEEEEEEC-----------CHHHHHCCCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHTT-
T ss_pred CCCEEEEEEEECCCCcEEEEEEeccch-hHHHHHHHHHHHHhCCCCCCcceeeeEecCCeEEEEEEeCCCCCHHHHHHh-
Confidence 899999999984 5568888876543 456788999999999999999999999999999999999999999999964
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecC---CCCeEEccccccccCCCC---CccccCccCCCc
Q 014478 80 ETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDK---DGNPRLSSFGLMKNSRDG---KSYSTNLAFTPP 153 (424)
Q Consensus 80 ~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~---~~~~kl~Dfg~~~~~~~~---~~~~gt~~y~aP 153 (424)
...+++.+++.++.|++.||.|||+++ |+||||||+|||++. ++.+||+|||+++..... ....||+.|+||
T Consensus 142 -~~~~~~~~~~~i~~qi~~~L~~LH~~~-ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aP 219 (349)
T 2w4o_A 142 -KGYYSERDAADAVKQILEAVAYLHENG-IVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQVLMKTVCGTPGYCAP 219 (349)
T ss_dssp -CSSCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEESSSSTTCCEEECCCC----------------CGGGSCH
T ss_pred -cCCCCHHHHHHHHHHHHHHHHHHHHCC-eEecCCCcccEEEecCCCCCCEEEccCccccccCcccccccccCCCCccCH
Confidence 457999999999999999999999999 999999999999975 889999999998865543 345689999999
Q ss_pred cccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhcc--cCCCCCchhHHHHHHHHHHhcccCcCC
Q 014478 154 EYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSA--LEGHFSNDEGTELVRLASRCLQSEARE 231 (424)
Q Consensus 154 E~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~li~~cl~~dp~~ 231 (424)
|++.+..++.++|||||||++|||++|..||......... ...+.... ........++.++.+||.+||..||++
T Consensus 220 E~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~---~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~ 296 (349)
T 2w4o_A 220 EILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGDQFM---FRRILNCEYYFISPWWDEVSLNAKDLVRKLIVLDPKK 296 (349)
T ss_dssp HHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCTTCHHHH---HHHHHTTCCCCCTTTTTTSCHHHHHHHHTTSCSSGGG
T ss_pred HHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCcccHHH---HHHHHhCCCccCCchhhhCCHHHHHHHHHHccCChhh
Confidence 9999888999999999999999999999888654222111 11111111 112223457889999999999999999
Q ss_pred CCCHHHHHHH
Q 014478 232 RPNAKSLVIS 241 (424)
Q Consensus 232 Rps~~~~~~~ 241 (424)
|||+.+++++
T Consensus 297 Rpt~~e~l~h 306 (349)
T 2w4o_A 297 RLTTFQALQH 306 (349)
T ss_dssp SCCHHHHHHS
T ss_pred CcCHHHHhcC
Confidence 9999999864
|
| >1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=3.9e-43 Score=329.61 Aligned_cols=240 Identities=16% Similarity=0.220 Sum_probs=198.0
Q ss_pred CCCcccceeeee-------cceecccccCCCc--hhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCH
Q 014478 2 GGRCSKFSICWF-------HCHLKSSVLESSD--LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETL 72 (424)
Q Consensus 2 G~~g~v~~~~~~-------~~~v~~~~~~~~~--~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL 72 (424)
|++|.||.+.+. +..+++|++.... .....+.+|+++++.++||||+++++++.+++..++||||+++|+|
T Consensus 36 G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 115 (322)
T 1p4o_A 36 GSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDL 115 (322)
T ss_dssp CSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEEECSSSSCEEEEECCTTCBH
T ss_pred CCceEEEeeeecCccCCCCceEEEEEecccccCHHHHHHHHHHHHHHHhcCCCCEeeeEEEEccCCccEEEEEeCCCCcH
Confidence 899999999875 4567777775433 3456788999999999999999999999999999999999999999
Q ss_pred HhHhccCC--------CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCC---
Q 014478 73 AKHLFHWE--------TQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG--- 141 (424)
Q Consensus 73 ~~~l~~~~--------~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~--- 141 (424)
.+++.... ..++++..++.++.|++.||.|||+++ |+||||||+||+++.++.+||+|||+++.....
T Consensus 116 ~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~-i~H~dikp~NIli~~~~~~kl~Dfg~~~~~~~~~~~ 194 (322)
T 1p4o_A 116 KSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANK-FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYY 194 (322)
T ss_dssp HHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHTT-CBCSCCSGGGEEECTTCCEEECCTTCCCGGGGGGCE
T ss_pred HHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHCC-CccCCCccceEEEcCCCeEEECcCcccccccccccc
Confidence 99986421 146789999999999999999999999 999999999999999999999999998765432
Q ss_pred ---CccccCccCCCccccccCCCCCCcceehhHHHHHHHhh-CCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHHH
Q 014478 142 ---KSYSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTEL 217 (424)
Q Consensus 142 ---~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 217 (424)
....+|+.|+|||++.+..++.++|||||||++|+|++ |..||...... .....+........+..++.++
T Consensus 195 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~l 269 (322)
T 1p4o_A 195 RKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNE-----QVLRFVMEGGLLDKPDNCPDML 269 (322)
T ss_dssp EGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCHH-----HHHHHHHTTCCCCCCTTCCHHH
T ss_pred ccccCCCCCCCccChhhhccCCCCchhhHHHHHHHHHHHHhcCCCccccCCHH-----HHHHHHHcCCcCCCCCCCCHHH
Confidence 22345788999999998889999999999999999999 77776553221 1111222222234456778899
Q ss_pred HHHHHHhcccCcCCCCCHHHHHHHHHHHhh
Q 014478 218 VRLASRCLQSEARERPNAKSLVISLMSLQK 247 (424)
Q Consensus 218 ~~li~~cl~~dp~~Rps~~~~~~~l~~~~~ 247 (424)
.+++.+||+.||.+|||+.+++++|+....
T Consensus 270 ~~li~~~l~~dp~~Rps~~e~l~~L~~~~~ 299 (322)
T 1p4o_A 270 FELMRMCWQYNPKMRPSFLEIISSIKEEME 299 (322)
T ss_dssp HHHHHHHTCSSGGGSCCHHHHHHHHGGGSC
T ss_pred HHHHHHHcCCCcccCcCHHHHHHHHHHhhc
Confidence 999999999999999999999999987654
|
| >4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.4e-43 Score=356.49 Aligned_cols=238 Identities=18% Similarity=0.237 Sum_probs=200.0
Q ss_pred CCCcccceeeee----cceecccccCCCc---hhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHh
Q 014478 2 GGRCSKFSICWF----HCHLKSSVLESSD---LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAK 74 (424)
Q Consensus 2 G~~g~v~~~~~~----~~~v~~~~~~~~~---~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~ 74 (424)
|+||.||++.+. +..|++|++.... ...+.|.+|+++|++++||||++++++|.. +..++||||+++|+|.+
T Consensus 380 G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~-~~~~lv~E~~~~g~L~~ 458 (635)
T 4fl3_A 380 GNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEA-ESWMLVMEMAELGPLNK 458 (635)
T ss_dssp CSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEES-SSEEEEEECCTTEEHHH
T ss_pred CCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEec-CCEEEEEEccCCCCHHH
Confidence 899999999773 4567888776433 235789999999999999999999999965 45889999999999999
Q ss_pred HhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCCC-------ccccC
Q 014478 75 HLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGK-------SYSTN 147 (424)
Q Consensus 75 ~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~~-------~~~gt 147 (424)
++.. ...+++.+++.++.||+.||.|||+++ ||||||||+|||++.++.+||+|||+++...... ...+|
T Consensus 459 ~l~~--~~~l~~~~~~~i~~qi~~~L~yLH~~~-iiHrDLkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~~~~~t 535 (635)
T 4fl3_A 459 YLQQ--NRHVKDKNIIELVHQVSMGMKYLEESN-FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWP 535 (635)
T ss_dssp HHHH--CTTCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEEEETTEEEECCTTHHHHTTC-------------C
T ss_pred HHhh--CCCCCHHHHHHHHHHHHHHHHHHHHCC-EeCCCCChHhEEEeCCCCEEEEEcCCccccccCccccccccCCCCc
Confidence 9964 567999999999999999999999999 9999999999999999999999999998664322 23457
Q ss_pred ccCCCccccccCCCCCCcceehhHHHHHHHhh-CCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHHHHHHHHHhcc
Q 014478 148 LAFTPPEYMRTGRVTPESVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQ 226 (424)
Q Consensus 148 ~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~ 226 (424)
+.|+|||++.+..++.++|||||||++|||++ |..||..... ......+........+..+++++.++|.+||+
T Consensus 536 ~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~-----~~~~~~i~~~~~~~~p~~~~~~l~~li~~cl~ 610 (635)
T 4fl3_A 536 VKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKG-----SEVTAMLEKGERMGCPAGCPREMYDLMNLCWT 610 (635)
T ss_dssp GGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCH-----HHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTC
T ss_pred eeeeChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCH-----HHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcC
Confidence 88999999998899999999999999999998 9988876422 22333344444556677889999999999999
Q ss_pred cCcCCCCCHHHHHHHHHHHhhh
Q 014478 227 SEARERPNAKSLVISLMSLQKE 248 (424)
Q Consensus 227 ~dp~~Rps~~~~~~~l~~~~~~ 248 (424)
.||++|||+.++++.|+.+...
T Consensus 611 ~dP~~RPs~~~l~~~L~~~~~~ 632 (635)
T 4fl3_A 611 YDVENRPGFAAVELRLRNYYYD 632 (635)
T ss_dssp SSTTTSCCHHHHHHHHHHHHHH
T ss_pred CCHhHCcCHHHHHHHHHHHHHH
Confidence 9999999999999999987654
|
| >3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-43 Score=340.36 Aligned_cols=233 Identities=18% Similarity=0.178 Sum_probs=194.2
Q ss_pred CCCcccceeee--ecceecccccCCCc----hhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHhH
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESSD----LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKH 75 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~~----~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~ 75 (424)
|+||.||.+.+ .+..+++|++.... .....+.+|+.++..++||||++++++|.+++..++||||++||+|.++
T Consensus 80 G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lV~E~~~gg~L~~~ 159 (410)
T 3v8s_A 80 GAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNL 159 (410)
T ss_dssp CSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCTTEEHHHH
T ss_pred CCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeCCCCCcHHHH
Confidence 89999999988 45667888775422 2245688999999999999999999999999999999999999999999
Q ss_pred hccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCC-----CccccCccC
Q 014478 76 LFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG-----KSYSTNLAF 150 (424)
Q Consensus 76 l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~-----~~~~gt~~y 150 (424)
+.. ..+++..+..++.||+.||.|||+++ |+||||||+|||++.+|.+||+|||+++..... ....||+.|
T Consensus 160 l~~---~~~~e~~~~~~~~qi~~aL~~LH~~g-ivHrDLKp~NILl~~~g~ikL~DFG~a~~~~~~~~~~~~~~~gt~~Y 235 (410)
T 3v8s_A 160 MSN---YDVPEKWARFYTAEVVLALDAIHSMG-FIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDY 235 (410)
T ss_dssp HHH---CCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEECTTSCEEECCCTTCEECCTTSEEECCSCCSCGGG
T ss_pred HHc---CCCCHHHHHHHHHHHHHHHHHHHHCC-eEeccCCHHHeeECCCCCEEEeccceeEeeccCCcccccCCcCCccc
Confidence 964 46899999999999999999999999 999999999999999999999999999876543 256799999
Q ss_pred CCccccccCC----CCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhc--ccCCCCCchhHHHHHHHHHHh
Q 014478 151 TPPEYMRTGR----VTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDS--ALEGHFSNDEGTELVRLASRC 224 (424)
Q Consensus 151 ~aPE~~~~~~----~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~li~~c 224 (424)
+|||++.+.. ++.++|||||||++|||++|..||........ ...+... ....+....+++++.+||.+|
T Consensus 236 ~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~----~~~i~~~~~~~~~p~~~~~s~~~~~li~~l 311 (410)
T 3v8s_A 236 ISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGT----YSKIMNHKNSLTFPDDNDISKEAKNLICAF 311 (410)
T ss_dssp CCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCCSSHHHH----HHHHHTHHHHCCCCTTCCCCHHHHHHHHHH
T ss_pred cCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCCCChhhH----HHHHHhccccccCCCcccccHHHHHHHHHH
Confidence 9999998654 78899999999999999999999876532221 1122211 122222335788999999999
Q ss_pred cccCcCC--CCCHHHHHHHH
Q 014478 225 LQSEARE--RPNAKSLVISL 242 (424)
Q Consensus 225 l~~dp~~--Rps~~~~~~~l 242 (424)
|..+|.+ ||+++++++|-
T Consensus 312 L~~~~~rlgR~~~~ei~~Hp 331 (410)
T 3v8s_A 312 LTDREVRLGRNGVEEIKRHL 331 (410)
T ss_dssp SSCGGGCTTSSCHHHHHTSG
T ss_pred ccChhhhCCCCCHHHHhcCc
Confidence 9999988 99999999863
|
| >3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.5e-43 Score=329.73 Aligned_cols=232 Identities=17% Similarity=0.253 Sum_probs=184.7
Q ss_pred CCCcccceeee--ecceecccccCC--CchhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCe------------------
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLES--SDLGETLNLEEAKAVGNLRSERLANLIGCCYEADE------------------ 59 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~------------------ 59 (424)
|+||.||.+.+ .+..|++|++.. .....+.+.+|+++|++++||||++++++|.+...
T Consensus 17 G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (332)
T 3qd2_B 17 GGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQEEMDEIWLKDESTD 96 (332)
T ss_dssp C-CSEEEEEEETTTCCEEEEEEEECCSTTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHHHHHHC---------
T ss_pred CCCeEEEEEEEcCCCcEEEEEEeecCCchhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhhhhhhhhhhcccccc
Confidence 89999999988 567788888753 33346789999999999999999999999866432
Q ss_pred ---------------------------------------eeEEEecCCCCCHHhHhccCCC-CCCCHHHHHHHHHHHHHH
Q 014478 60 ---------------------------------------RLLVAEFMPNETLAKHLFHWET-QPMKWAMRLRVALYLAQA 99 (424)
Q Consensus 60 ---------------------------------------~~lv~e~~~~gsL~~~l~~~~~-~~l~~~~~~~i~~qi~~~ 99 (424)
.++||||++||+|.+++..... ...++..++.++.||+.|
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~i~~qi~~a 176 (332)
T 3qd2_B 97 WPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDREHGVCLHIFIQIAEA 176 (332)
T ss_dssp -----------------------------------CCCEEEEEEECCCSSCHHHHHHTCCSGGGSCHHHHHHHHHHHHHH
T ss_pred ccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccCccchhhHHHHHHHHHHHHH
Confidence 7899999999999999975321 245667799999999999
Q ss_pred HHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCC----------------CccccCccCCCccccccCCCCC
Q 014478 100 LEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG----------------KSYSTNLAFTPPEYMRTGRVTP 163 (424)
Q Consensus 100 L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~----------------~~~~gt~~y~aPE~~~~~~~~~ 163 (424)
|.|||+++ |+||||||+|||++.++.+||+|||+++..... ....||+.|+|||++.+..++.
T Consensus 177 L~~LH~~~-ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ 255 (332)
T 3qd2_B 177 VEFLHSKG-LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTKLYMSPEQIHGNNYSH 255 (332)
T ss_dssp HHHHHHTT-EECCCCCGGGEEECTTCCEEECCCTTCEECSCC--------------CCCSCC-CGGGSCHHHHHCCCCCT
T ss_pred HHHHHhCC-eeecCCCcccEEEeCCCCEEEeecCcccccccchhhccccccccccccccccCCCcCccChHHhcCCCCcc
Confidence 99999999 999999999999999999999999999875533 2346899999999999889999
Q ss_pred CcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 014478 164 ESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERPNAKSLVIS 241 (424)
Q Consensus 164 ~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~~~~~ 241 (424)
++|||||||++|+|++|..|+... ...................++++.++|.+||+.||.+|||+.+++++
T Consensus 256 ~~Di~slG~il~el~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~~ 326 (332)
T 3qd2_B 256 KVDIFSLGLILFELLYSFSTQMER-------VRIITDVRNLKFPLLFTQKYPQEHMMVQDMLSPSPTERPEATDIIEN 326 (332)
T ss_dssp HHHHHHHHHHHHHHHSCCCCHHHH-------HHHHHHHHTTCCCHHHHHHCHHHHHHHHHHHCSSGGGSCCHHHHHHS
T ss_pred hhhHHHHHHHHHHHHHcCCChhHH-------HHHHHHhhccCCCcccccCChhHHHHHHHHccCCCCcCCCHHHHhhc
Confidence 999999999999999987442211 11111111111111123456788999999999999999999999864
|
| >3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-43 Score=330.23 Aligned_cols=239 Identities=17% Similarity=0.199 Sum_probs=185.8
Q ss_pred CCCcccceeee--ecceecccccCCCc----hhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCe----eeEEEecCCCCC
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESSD----LGETLNLEEAKAVGNLRSERLANLIGCCYEADE----RLLVAEFMPNET 71 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~~----~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~----~~lv~e~~~~gs 71 (424)
|++|.||.+.+ .+..+++|++.... .....+.+|++++++++||||+++++++..... .++||||++||+
T Consensus 23 G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~~lv~e~~~g~~ 102 (311)
T 3ork_A 23 GGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVT 102 (311)
T ss_dssp CSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEETTEEEEEEEEECCCEEE
T ss_pred CCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCCCCcccEEEEecCCCCC
Confidence 89999999986 56778888875432 234578899999999999999999999877543 399999999999
Q ss_pred HHhHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCC-------Ccc
Q 014478 72 LAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG-------KSY 144 (424)
Q Consensus 72 L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~-------~~~ 144 (424)
|.+++.. ..++++.+++.++.|++.||.|||+++ |+||||||+|||++.++.+||+|||+++..... ...
T Consensus 103 L~~~l~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~-ivH~dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~ 179 (311)
T 3ork_A 103 LRDIVHT--EGPMTPKRAIEVIADACQALNFSHQNG-IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAV 179 (311)
T ss_dssp HHHHHHH--HCSCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEEETTSCEEECCCSCC----------------
T ss_pred HHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC-CCcCCCCHHHEEEcCCCCEEEeeccCccccccccccccccccc
Confidence 9999964 457999999999999999999999999 999999999999999999999999999765432 234
Q ss_pred ccCccCCCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHHHHHHHHHh
Q 014478 145 STNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRC 224 (424)
Q Consensus 145 ~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c 224 (424)
.||+.|+|||++.+..++.++|||||||++|+|++|+.||............... ...........+++++.++|.+|
T Consensus 180 ~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~li~~~ 257 (311)
T 3ork_A 180 IGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVRE--DPIPPSARHEGLSADLDAVVLKA 257 (311)
T ss_dssp --CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHC--CCCCHHHHSTTCCHHHHHHHHHH
T ss_pred CcCcccCCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcC--CCCCcccccCCCCHHHHHHHHHH
Confidence 5899999999999889999999999999999999999988765322211111100 00000011234678899999999
Q ss_pred cccCcCCCCCHHHHHHH-HHHH
Q 014478 225 LQSEARERPNAKSLVIS-LMSL 245 (424)
Q Consensus 225 l~~dp~~Rps~~~~~~~-l~~~ 245 (424)
|+.||++||+..+++.+ +...
T Consensus 258 l~~dP~~R~~~~~~l~~~l~~~ 279 (311)
T 3ork_A 258 LAKNPENRYQTAAEMRADLVRV 279 (311)
T ss_dssp TCSSGGGSCSSHHHHHHHHHHH
T ss_pred HhcCHhhChhhHHHHHHHHHHH
Confidence 99999999977766654 4433
|
| >3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-42 Score=329.34 Aligned_cols=235 Identities=14% Similarity=0.233 Sum_probs=192.6
Q ss_pred CCCcccceeee--ecceecccccCCC----chhhhHHHHHHHHHhcC-CCcCcceeEEEEEeCCeeeEEEecCCCCCHHh
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESS----DLGETLNLEEAKAVGNL-RSERLANLIGCCYEADERLLVAEFMPNETLAK 74 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~----~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~ 74 (424)
|+||.||.+.+ .+..+++|++... ....+.+.+|..++.++ +||||+++++++.+.+..++||||++||+|.+
T Consensus 20 G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~lv~e~~~gg~L~~ 99 (345)
T 3a8x_A 20 GSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMF 99 (345)
T ss_dssp CSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCCSCBHHH
T ss_pred cCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCCEEEEEEeCCCCCcHHH
Confidence 89999999987 4667888877543 23356688899999988 89999999999999999999999999999999
Q ss_pred HhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCC----CCccccCccC
Q 014478 75 HLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRD----GKSYSTNLAF 150 (424)
Q Consensus 75 ~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~----~~~~~gt~~y 150 (424)
++.. ...+++..++.++.||+.||.|||+++ |+||||||+|||++.+|.+||+|||+++.... .....||+.|
T Consensus 100 ~l~~--~~~l~~~~~~~~~~qi~~aL~~LH~~~-ivHrDlkp~NIll~~~g~~kL~DFG~a~~~~~~~~~~~~~~gt~~y 176 (345)
T 3a8x_A 100 HMQR--QRKLPEEHARFYSAEISLALNYLHERG-IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSTFCGTPNY 176 (345)
T ss_dssp HHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTT-CBCCCCCGGGEEECTTSCEEECCGGGCBCSCCTTCCBCCCCSCGGG
T ss_pred HHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-ceecCCCHHHEEECCCCCEEEEeccccccccCCCCcccccCCCccc
Confidence 9964 457999999999999999999999999 99999999999999999999999999986432 2345789999
Q ss_pred CCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHH-----HhhhhhhHhhhcccCCCCCchhHHHHHHHHHHhc
Q 014478 151 TPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDL-----IRSKNFLLLMDSALEGHFSNDEGTELVRLASRCL 225 (424)
Q Consensus 151 ~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl 225 (424)
+|||++.+..++.++|||||||++|||++|..||....... ........+.. .....|..+++++.++|.+||
T Consensus 177 ~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~i~~--~~~~~p~~~s~~~~~li~~lL 254 (345)
T 3a8x_A 177 IAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILE--KQIRIPRSLSVKAASVLKSFL 254 (345)
T ss_dssp CCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTTTC-------CHHHHHHHHHH--CCCCCCTTSCHHHHHHHHHHT
T ss_pred cCccccCCCCCChHHhHHHHHHHHHHHHhCCCCcCCcccccccccccHHHHHHHHHc--CCCCCCCCCCHHHHHHHHHHh
Confidence 99999998889999999999999999999998885421100 00011111111 123456678889999999999
Q ss_pred ccCcCCCCCH------HHHHHH
Q 014478 226 QSEARERPNA------KSLVIS 241 (424)
Q Consensus 226 ~~dp~~Rps~------~~~~~~ 241 (424)
+.||.+||++ .+++.|
T Consensus 255 ~~dP~~R~~~~~~~~~~~i~~h 276 (345)
T 3a8x_A 255 NKDPKERLGCHPQTGFADIQGH 276 (345)
T ss_dssp CSSTTTSTTCCTTTHHHHHHTS
T ss_pred cCCHhHCCCCCCcCCHHHHhcC
Confidence 9999999996 566654
|
| >1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-42 Score=321.20 Aligned_cols=237 Identities=16% Similarity=0.220 Sum_probs=188.1
Q ss_pred CCCcccceeee-ecceecccccCCCch---hhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHhHhc
Q 014478 2 GGRCSKFSICW-FHCHLKSSVLESSDL---GETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLF 77 (424)
Q Consensus 2 G~~g~v~~~~~-~~~~v~~~~~~~~~~---~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~ 77 (424)
|+||.||.+.+ .+..+++|++..... ....+.+|++++++++||||+++++++...+..++||||+++ +|.+++.
T Consensus 13 G~~g~V~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~-~l~~~~~ 91 (288)
T 1ob3_A 13 GTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEHLDQ-DLKKLLD 91 (288)
T ss_dssp ETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEECCSE-EHHHHHH
T ss_pred CCCEEEEEEEcCCCCEEEEEEEeccccccccchhHHHHHHHHHhcCCCCEeeeeeEEccCCeEEEEEEecCC-CHHHHHH
Confidence 89999999987 467788887754332 246788999999999999999999999999999999999986 9999886
Q ss_pred cCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCC----CccccCccCCCc
Q 014478 78 HWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG----KSYSTNLAFTPP 153 (424)
Q Consensus 78 ~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~----~~~~gt~~y~aP 153 (424)
. ....+++.++..++.|++.||.|||+++ |+||||||+|||++.++.+||+|||+++..... ....+|+.|+||
T Consensus 92 ~-~~~~~~~~~~~~~~~qi~~~l~~lH~~~-i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~t~~y~aP 169 (288)
T 1ob3_A 92 V-CEGGLESVTAKSFLLQLLNGIAYCHDRR-VLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEIVTLWYRAP 169 (288)
T ss_dssp T-STTCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEECTTSCEEECCTTHHHHHCC---------CCCTTCCH
T ss_pred h-cccCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCCHHHEEEcCCCCEEEeECccccccCccccccccccccccccCc
Confidence 5 3467999999999999999999999999 999999999999999999999999998764422 334689999999
Q ss_pred cccccC-CCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhh----------------ccc-------CCCC
Q 014478 154 EYMRTG-RVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMD----------------SAL-------EGHF 209 (424)
Q Consensus 154 E~~~~~-~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~----------------~~~-------~~~~ 209 (424)
|++.+. .++.++|||||||++|+|++|..||.................. ... ....
T Consensus 170 E~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (288)
T 1ob3_A 170 DVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPNFTVYEPLPWESF 249 (288)
T ss_dssp HHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCCTTCCCCCCCCGGGT
T ss_pred hheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHCCCChhhchhhhcccccccccccccCccHHHH
Confidence 999764 5899999999999999999999888764222111111100000 000 0011
Q ss_pred CchhHHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 014478 210 SNDEGTELVRLASRCLQSEARERPNAKSLVIS 241 (424)
Q Consensus 210 ~~~~~~~l~~li~~cl~~dp~~Rps~~~~~~~ 241 (424)
...+++++.++|.+||+.||++|||+++++++
T Consensus 250 ~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 281 (288)
T 1ob3_A 250 LKGLDESGIDLLSKMLKLDPNQRITAKQALEH 281 (288)
T ss_dssp CCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred hhhcCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence 23467899999999999999999999999864
|
| >2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-42 Score=329.87 Aligned_cols=231 Identities=17% Similarity=0.256 Sum_probs=194.2
Q ss_pred CCCcccceeee--ecceecccccCCCc----hhhhHHHHHHHHHhcC-CCcCcceeEEEEEeCCeeeEEEecCCCCCHHh
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESSD----LGETLNLEEAKAVGNL-RSERLANLIGCCYEADERLLVAEFMPNETLAK 74 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~~----~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~ 74 (424)
|+||.||.+.+ .+..+++|++.... .....+..|.+++..+ +||||+++++++.+.+..|+||||++||+|.+
T Consensus 31 G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~lv~E~~~gg~L~~ 110 (353)
T 2i0e_A 31 GSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMY 110 (353)
T ss_dssp ETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSSEEEEEEECCCSCBHHH
T ss_pred CCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCCEEEEEEeCCCCCcHHH
Confidence 89999999988 45678888875432 2356788899999998 89999999999999999999999999999999
Q ss_pred HhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCC----CCccccCccC
Q 014478 75 HLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRD----GKSYSTNLAF 150 (424)
Q Consensus 75 ~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~----~~~~~gt~~y 150 (424)
++.. ...+++..++.++.||+.||.|||+++ |+||||||+|||++.+|.+||+|||+++.... .....||+.|
T Consensus 111 ~l~~--~~~~~~~~~~~~~~qi~~aL~~LH~~g-ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~~~~~~~~gt~~y 187 (353)
T 2i0e_A 111 HIQQ--VGRFKEPHAVFYAAEIAIGLFFLQSKG-IIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKTFCGTPDY 187 (353)
T ss_dssp HHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTT-CBCCCCCGGGEEECTTSCEEECCCTTCBCCCCTTCCBCCCCSCGGG
T ss_pred HHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC-EEeccCCHHHEEEcCCCcEEEEeCCcccccccCCcccccccCCccc
Confidence 9964 357999999999999999999999999 99999999999999999999999999986432 2345799999
Q ss_pred CCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHHHHHHHHHhcccCcC
Q 014478 151 TPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEAR 230 (424)
Q Consensus 151 ~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~ 230 (424)
+|||++.+..++.++|||||||++|||++|..||........ ...+... ...+|..+++++.++|.+||..||.
T Consensus 188 ~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~----~~~i~~~--~~~~p~~~s~~~~~li~~lL~~dP~ 261 (353)
T 2i0e_A 188 IAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDEL----FQSIMEH--NVAYPKSMSKEAVAICKGLMTKHPG 261 (353)
T ss_dssp CCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH----HHHHHHC--CCCCCTTSCHHHHHHHHHHTCSCTT
T ss_pred cChhhhcCCCcCCcccccchHHHHHHHHcCCCCCCCCCHHHH----HHHHHhC--CCCCCCCCCHHHHHHHHHHhhcCHH
Confidence 999999988999999999999999999999998876432211 1122222 2235667889999999999999999
Q ss_pred CCCC-----HHHHHHH
Q 014478 231 ERPN-----AKSLVIS 241 (424)
Q Consensus 231 ~Rps-----~~~~~~~ 241 (424)
+||+ +++++++
T Consensus 262 ~R~~~~~~~~~~i~~h 277 (353)
T 2i0e_A 262 KRLGCGPEGERDIKEH 277 (353)
T ss_dssp SCTTCSTTHHHHHHTS
T ss_pred HcCCCCCCCHHHHhcC
Confidence 9995 4777654
|
| >3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-42 Score=327.06 Aligned_cols=231 Identities=17% Similarity=0.224 Sum_probs=186.4
Q ss_pred CCCcccceeee-----ecceecccccCCCc-----hhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCC
Q 014478 2 GGRCSKFSICW-----FHCHLKSSVLESSD-----LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNET 71 (424)
Q Consensus 2 G~~g~v~~~~~-----~~~~v~~~~~~~~~-----~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gs 71 (424)
|+||.||.+.. .+..+++|++.... .....+.+|+.+|+.++||||+++++++..++..++||||++||+
T Consensus 28 G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~ 107 (327)
T 3a62_A 28 GGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGGKLYLILEYLSGGE 107 (327)
T ss_dssp ETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEECSSCEEEEEECCTTEE
T ss_pred CCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEEcCCEEEEEEeCCCCCc
Confidence 89999999876 46678888776542 234567889999999999999999999999999999999999999
Q ss_pred HHhHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCC----CCccccC
Q 014478 72 LAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRD----GKSYSTN 147 (424)
Q Consensus 72 L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~----~~~~~gt 147 (424)
|.+++.. ...+++..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++.... .....||
T Consensus 108 L~~~l~~--~~~~~~~~~~~~~~qi~~al~~lH~~~-ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt 184 (327)
T 3a62_A 108 LFMQLER--EGIFMEDTACFYLAEISMALGHLHQKG-IIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHTFCGT 184 (327)
T ss_dssp HHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCTTTEEECTTSCEEECCCSCC----------CTTSSC
T ss_pred HHHHHHh--CCCCCHHHHHHHHHHHHHHHHHHHhCC-EEcccCCHHHeEECCCCcEEEEeCCcccccccCCccccccCCC
Confidence 9999964 457899999999999999999999999 99999999999999999999999999875432 2345789
Q ss_pred ccCCCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHHHHHHHHHhccc
Q 014478 148 LAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQS 227 (424)
Q Consensus 148 ~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~ 227 (424)
+.|+|||++.+..++.++|||||||++|+|++|..||........ ...+... ....+..+++++.++|.+||..
T Consensus 185 ~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~----~~~i~~~--~~~~p~~~~~~~~~li~~~L~~ 258 (327)
T 3a62_A 185 IEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKT----IDKILKC--KLNLPPYLTQEARDLLKKLLKR 258 (327)
T ss_dssp CTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH----HHHHHHT--CCCCCTTSCHHHHHHHHHHSCS
T ss_pred cCccCHhhCcCCCCCCcccchhHHHHHHHHHHCCCCCCCCCHHHH----HHHHHhC--CCCCCCCCCHHHHHHHHHHHhc
Confidence 999999999988899999999999999999999998876432211 1111111 2234566788999999999999
Q ss_pred CcCCCC-----CHHHHHHH
Q 014478 228 EARERP-----NAKSLVIS 241 (424)
Q Consensus 228 dp~~Rp-----s~~~~~~~ 241 (424)
||++|| ++.++++|
T Consensus 259 dp~~R~~~~~~~~~e~l~h 277 (327)
T 3a62_A 259 NAASRLGAGPGDAGEVQAH 277 (327)
T ss_dssp CGGGSTTSSTTTHHHHHHS
T ss_pred CHhhccCCCCCCHHHHHcC
Confidence 999999 77888775
|
| >3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=9.6e-43 Score=332.10 Aligned_cols=240 Identities=16% Similarity=0.238 Sum_probs=194.8
Q ss_pred CCCcccceeeee--cceecccccCCC--chhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHhHhc
Q 014478 2 GGRCSKFSICWF--HCHLKSSVLESS--DLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLF 77 (424)
Q Consensus 2 G~~g~v~~~~~~--~~~v~~~~~~~~--~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~ 77 (424)
|++|.||.+.+. +..+++|++... ....+.+.+|+.+++.++||||+++++++..++..++||||++||+|.+++.
T Consensus 44 G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~ 123 (360)
T 3eqc_A 44 GNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLK 123 (360)
T ss_dssp CSSCEEEEEEETTTCCEEEEEEEECCCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEETTEEEEEECCCTTCBHHHHHH
T ss_pred CCCeEEEEEEECCCCcEEEEEEeccccCHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEECCEEEEEEECCCCCCHHHHHH
Confidence 899999999984 667787777543 3446788999999999999999999999999999999999999999999996
Q ss_pred cCCCCCCCHHHHHHHHHHHHHHHHHHHhC-CCcccccCCCCCeeecCCCCeEEccccccccCC--CCCccccCccCCCcc
Q 014478 78 HWETQPMKWAMRLRVALYLAQALEYCSSK-GRALYHDLNAYRILFDKDGNPRLSSFGLMKNSR--DGKSYSTNLAFTPPE 154 (424)
Q Consensus 78 ~~~~~~l~~~~~~~i~~qi~~~L~~lH~~-~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~--~~~~~~gt~~y~aPE 154 (424)
. ...+++..+..++.|++.||.|||++ + |+||||||+|||++.++.+||+|||++.... ......||+.|+|||
T Consensus 124 ~--~~~~~~~~~~~i~~~i~~~l~~lh~~~~-i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~gt~~y~aPE 200 (360)
T 3eqc_A 124 K--AGRIPEQILGKVSIAVIKGLTYLREKHK-IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPE 200 (360)
T ss_dssp H--HSSCCHHHHHHHHHHHHHHHHHHHHHHC-CCCSCCSGGGEEECTTCCEEECCCCCCHHHHHHC----CCCCTTCCHH
T ss_pred H--cCCCCHHHHHHHHHHHHHHHHHHHHhCC-EEcCCccHHHEEECCCCCEEEEECCCCcccccccccCCCCCCCeECHH
Confidence 5 45799999999999999999999996 8 9999999999999999999999999986432 233457899999999
Q ss_pred ccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhh--------------------------------------h
Q 014478 155 YMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSK--------------------------------------N 196 (424)
Q Consensus 155 ~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~--------------------------------------~ 196 (424)
++.+..++.++|||||||++|+|++|..||........... .
T Consensus 201 ~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (360)
T 3eqc_A 201 RLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLNKFGMDSRPPMAIFEL 280 (360)
T ss_dssp HHTTCCCSHHHHHHHHHHHHHHHHHTSCCSSCCCHHHHHHHHC------------------------------CCCHHHH
T ss_pred HHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccCCCCCCCcccCCCcccccccCCCCcccchhh
Confidence 99988899999999999999999999988875422211110 0
Q ss_pred hhHhhhcccCCCCCchhHHHHHHHHHHhcccCcCCCCCHHHHHHHHHH
Q 014478 197 FLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERPNAKSLVISLMS 244 (424)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~~~~~l~~ 244 (424)
.............+..++.++.+||.+||+.||++|||+++++++-.-
T Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~ 328 (360)
T 3eqc_A 281 LDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFI 328 (360)
T ss_dssp HHHHHHSCCCCCCTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHTSHHH
T ss_pred hhHHhccCCCCCCcccccHHHHHHHHHHhhcChhhCCCHHHHhhChHh
Confidence 001111111112223467899999999999999999999999987543
|
| >4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.2e-43 Score=340.28 Aligned_cols=237 Identities=16% Similarity=0.122 Sum_probs=193.4
Q ss_pred CCCcccceeeee--cceecccccCCCc----hhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHhH
Q 014478 2 GGRCSKFSICWF--HCHLKSSVLESSD----LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKH 75 (424)
Q Consensus 2 G~~g~v~~~~~~--~~~v~~~~~~~~~----~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~ 75 (424)
|+||.||.+.+. +..+++|++.... .....+.+|+.++..++||||++++++|.+++..+|||||++||+|.++
T Consensus 85 G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~~~~~lV~Ey~~gg~L~~~ 164 (437)
T 4aw2_A 85 GAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQDDNNLYLVMDYYVGGDLLTL 164 (437)
T ss_dssp CSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEEECSSEEEEEECCCTTCBHHHH
T ss_pred CCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCEEEEEEecCCCCcHHHH
Confidence 899999999884 5667888775422 2234588999999999999999999999999999999999999999999
Q ss_pred hccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCC-----CccccCccC
Q 014478 76 LFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG-----KSYSTNLAF 150 (424)
Q Consensus 76 l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~-----~~~~gt~~y 150 (424)
+.. ....+++..+..++.||+.||.|||+++ ||||||||+|||++.+|.+||+|||+++..... ....||+.|
T Consensus 165 l~~-~~~~l~e~~~~~~~~qi~~aL~~LH~~g-iiHrDLKp~NILl~~~g~vkL~DFGla~~~~~~~~~~~~~~~GT~~Y 242 (437)
T 4aw2_A 165 LSK-FEDRLPEEMARFYLAEMVIAIDSVHQLH-YVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQSSVAVGTPDY 242 (437)
T ss_dssp HHT-TTTCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEECTTSCEEECCCTTCEECCTTSCEECCSCCSCGGG
T ss_pred HHH-ccCCCCHHHHHHHHHHHHHHHHHHHhCC-eEecccCHHHeeEcCCCCEEEcchhhhhhcccCCCcccccccCCcCe
Confidence 965 2467999999999999999999999999 999999999999999999999999999765433 235799999
Q ss_pred CCccccc-----cCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHHHHHHHHHhc
Q 014478 151 TPPEYMR-----TGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCL 225 (424)
Q Consensus 151 ~aPE~~~-----~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl 225 (424)
+|||++. .+.++.++|||||||++|||++|+.||........-........ ..........+++++.+||.+||
T Consensus 243 ~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~-~~~~p~~~~~~s~~~~dLi~~lL 321 (437)
T 4aw2_A 243 ISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKE-RFQFPTQVTDVSENAKDLIRRLI 321 (437)
T ss_dssp CCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTHHH-HCCCCSSCCCSCHHHHHHHHTTS
T ss_pred eChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCCCChhHHHHhhhhccc-cccCCcccccCCHHHHHHHHHHh
Confidence 9999997 45689999999999999999999999876532222111111000 11111222347889999999999
Q ss_pred ccCcCC--CCCHHHHHHH
Q 014478 226 QSEARE--RPNAKSLVIS 241 (424)
Q Consensus 226 ~~dp~~--Rps~~~~~~~ 241 (424)
..+|++ ||+++++++|
T Consensus 322 ~~~~~r~~r~~~~eil~H 339 (437)
T 4aw2_A 322 CSREHRLGQNGIEDFKKH 339 (437)
T ss_dssp SCGGGCTTTTTTHHHHTS
T ss_pred cccccccCCCCHHHHhCC
Confidence 988888 9999999876
|
| >2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-42 Score=325.69 Aligned_cols=242 Identities=20% Similarity=0.291 Sum_probs=198.5
Q ss_pred CCCcccceeeee-------cceecccccCCCc--hhhhHHHHHHHHHhcC-CCcCcceeEEEEEeCC-eeeEEEecCCCC
Q 014478 2 GGRCSKFSICWF-------HCHLKSSVLESSD--LGETLNLEEAKAVGNL-RSERLANLIGCCYEAD-ERLLVAEFMPNE 70 (424)
Q Consensus 2 G~~g~v~~~~~~-------~~~v~~~~~~~~~--~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~-~~~lv~e~~~~g 70 (424)
|+||.||.+.+. +..+++|++.... ...+.+.+|++++.++ +||||+++++++...+ ..++||||+++|
T Consensus 38 G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~~lv~e~~~~~ 117 (316)
T 2xir_A 38 GAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFG 117 (316)
T ss_dssp CSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECCTTSCCEEEEECCTTE
T ss_pred CCceeEEEEEEecCCccccceEEEEEecccCCCcHHHHHHHHHHHHHHhcccCCCeeeEEEEEecCCCceEEEEEcCCCC
Confidence 899999999863 3567777775433 3456789999999999 7999999999998754 489999999999
Q ss_pred CHHhHhccCCC--------------CCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccc
Q 014478 71 TLAKHLFHWET--------------QPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMK 136 (424)
Q Consensus 71 sL~~~l~~~~~--------------~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~ 136 (424)
+|.+++..... ..+++..++.++.|++.||.|||+++ ++||||||+||+++.++.+||+|||+++
T Consensus 118 ~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~-i~H~dikp~Nil~~~~~~~kl~Dfg~~~ 196 (316)
T 2xir_A 118 NLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK-CIHRDLAARNILLSEKNVVKICDFGLAR 196 (316)
T ss_dssp EHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEECGGGCEEECCCGGGS
T ss_pred cHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHhCC-cccccCccceEEECCCCCEEECCCcccc
Confidence 99999975321 12889999999999999999999999 9999999999999999999999999998
Q ss_pred cCCCCC------ccccCccCCCccccccCCCCCCcceehhHHHHHHHhh-CCCCCCchhhHHHhhhhhhHhhhcccCCCC
Q 014478 137 NSRDGK------SYSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKNFLLLMDSALEGHF 209 (424)
Q Consensus 137 ~~~~~~------~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 209 (424)
...... ...+|+.|+|||++.+..++.++|||||||++|+|++ |..||...... ......+........
T Consensus 197 ~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~----~~~~~~~~~~~~~~~ 272 (316)
T 2xir_A 197 DIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID----EEFCRRLKEGTRMRA 272 (316)
T ss_dssp CTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCCS----HHHHHHHHHTCCCCC
T ss_pred ccccCccceeccCCCcceeecCchhhccccccchhHHHHHHHHHHHHHhCCCCCCcccchh----HHHHHHhccCccCCC
Confidence 654332 2346789999999998899999999999999999998 88777653211 112222222333445
Q ss_pred CchhHHHHHHHHHHhcccCcCCCCCHHHHHHHHHHHhhh
Q 014478 210 SNDEGTELVRLASRCLQSEARERPNAKSLVISLMSLQKE 248 (424)
Q Consensus 210 ~~~~~~~l~~li~~cl~~dp~~Rps~~~~~~~l~~~~~~ 248 (424)
+..+++++.+++.+||+.||.+|||+.+++++|+.+...
T Consensus 273 ~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~ 311 (316)
T 2xir_A 273 PDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQA 311 (316)
T ss_dssp CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhh
Confidence 566788999999999999999999999999999998765
|
| >3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-42 Score=328.28 Aligned_cols=237 Identities=16% Similarity=0.126 Sum_probs=193.6
Q ss_pred CCCcccceeee--ecceecccccCCCchhhhHHHHHHHHHhcCC-----CcCcceeEEEEEeCCeeeEEEecCCCCCHHh
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESSDLGETLNLEEAKAVGNLR-----SERLANLIGCCYEADERLLVAEFMPNETLAK 74 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~~~~~~~~~~E~~~l~~l~-----h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~ 74 (424)
|+||.||.+.+ .+..+++|++.........+..|+.+++.++ ||||+++++++...+..++||||+ +++|.+
T Consensus 46 G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~~~~~h~~iv~~~~~~~~~~~~~lv~e~~-~~~L~~ 124 (360)
T 3llt_A 46 GTFGRVLLCQHIDNKKYYAVKVVRNIKKYTRSAKIEADILKKIQNDDINNNNIVKYHGKFMYYDHMCLIFEPL-GPSLYE 124 (360)
T ss_dssp CSSEEEEEEEETTTCCEEEEEEECSCHHHHHHHHHHHHHHHHTCCCSTTGGGBCCEEEEEEETTEEEEEECCC-CCBHHH
T ss_pred cCCeEEEEEEECCCCeEEEEEEeccchhhhhhhHHHHHHHHHhcccCCCCCCeecccceeeECCeeEEEEcCC-CCCHHH
Confidence 89999999998 6677899988876666778889999999996 999999999999999999999999 889999
Q ss_pred HhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecC-------------------------CCCeEE
Q 014478 75 HLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDK-------------------------DGNPRL 129 (424)
Q Consensus 75 ~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~-------------------------~~~~kl 129 (424)
++.......+++.++..++.||+.||.|||+++ |+||||||+|||++. ++.+||
T Consensus 125 ~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~-ivHrDlkp~NIll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl 203 (360)
T 3llt_A 125 IITRNNYNGFHIEDIKLYCIEILKALNYLRKMS-LTHTDLKPENILLDDPYFEKSLITVRRVTDGKKIQIYRTKSTGIKL 203 (360)
T ss_dssp HHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEESCTTCCEEEEEEECTTTCCEEEEEEESCCCEEE
T ss_pred HHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCC-eeeCCCCcccEEEccccccccccchhcccccccccccccCCCCEEE
Confidence 997655567999999999999999999999999 999999999999975 788999
Q ss_pred ccccccccCCC-CCccccCccCCCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhc-----
Q 014478 130 SSFGLMKNSRD-GKSYSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDS----- 203 (424)
Q Consensus 130 ~Dfg~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~----- 203 (424)
+|||+++.... .....||+.|+|||++.+..++.++|||||||++|+|++|+.||........... ......+
T Consensus 204 ~DFG~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~-~~~~~~~~p~~~ 282 (360)
T 3llt_A 204 IDFGCATFKSDYHGSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAELYTGSLLFRTHEHMEHLAM-MESIIQPIPKNM 282 (360)
T ss_dssp CCCTTCEETTSCCCSCCSCGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHH-HHHHTCCCCHHH
T ss_pred EeccCceecCCCCcCccCcccccCcHHHcCCCCCCccchHHHHHHHHHHHHCCCCCCCCcHHHHHHH-HHHhcCCCCHHH
Confidence 99999986554 3456789999999999999999999999999999999999988875421111000 0000000
Q ss_pred ----------------ccCCCCC--------------------chhHHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 014478 204 ----------------ALEGHFS--------------------NDEGTELVRLASRCLQSEARERPNAKSLVIS 241 (424)
Q Consensus 204 ----------------~~~~~~~--------------------~~~~~~l~~li~~cl~~dp~~Rps~~~~~~~ 241 (424)
.....++ ...++.+.+||.+||+.||++|||+++++++
T Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpta~elL~h 356 (360)
T 3llt_A 283 LYEATKTNGSKYVNKDELKLAWPENASSINSIKHVKKCLPLYKIIKHELFCDFLYSILQIDPTLRPSPAELLKH 356 (360)
T ss_dssp HHHHTTSGGGGGEETTTTEECTTTTCSCHHHHHHHHTCCCHHHHCCCHHHHHHHHHHCCSSGGGSCCHHHHTTS
T ss_pred HhhhhhccCccccCcccceecCcccccchhhhhhhhhcccccccchHHHHHHHHHHHhcCChhhCCCHHHHhcC
Confidence 0000000 0112678899999999999999999999854
|
| >2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-42 Score=339.83 Aligned_cols=232 Identities=16% Similarity=0.199 Sum_probs=196.4
Q ss_pred CCCcccceeee--ecceecccccCCCc----hhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHhH
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESSD----LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKH 75 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~~----~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~ 75 (424)
|+||.||.+.+ .+..|++|++.... .....+.+|+.+++.++||||+++++++...+..++||||++||+|.++
T Consensus 27 G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~lv~E~~~gg~L~~~ 106 (476)
T 2y94_A 27 GTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMVMEYVSGGELFDY 106 (476)
T ss_dssp CSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCSSEEHHHH
T ss_pred CCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeCCCCCcHHHH
Confidence 89999999987 57788888875433 2345788999999999999999999999999999999999999999999
Q ss_pred hccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCC---CccccCccCCC
Q 014478 76 LFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG---KSYSTNLAFTP 152 (424)
Q Consensus 76 l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~---~~~~gt~~y~a 152 (424)
+.. .+.+++.+++.++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++..... ....||+.|+|
T Consensus 107 l~~--~~~l~~~~~~~i~~qi~~aL~~LH~~g-ivHrDLkp~NIll~~~~~vkL~DFG~a~~~~~~~~~~~~~gt~~y~a 183 (476)
T 2y94_A 107 ICK--NGRLDEKESRRLFQQILSGVDYCHRHM-VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRTSCGSPNYAA 183 (476)
T ss_dssp TTS--SSSCCHHHHHHHHHHHHHHHHHHHTTT-EECSCCSGGGEEECTTCCEEECCCSSCEECCTTCCBCCCCSCSTTCC
T ss_pred HHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC-CCcccccHHHEEEecCCCeEEEeccchhhccccccccccCCCcCeEC
Confidence 964 567999999999999999999999999 999999999999999999999999999876543 34578999999
Q ss_pred ccccccCCC-CCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHHHHHHHHHhcccCcCC
Q 014478 153 PEYMRTGRV-TPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARE 231 (424)
Q Consensus 153 PE~~~~~~~-~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~ 231 (424)
||++.+..+ +.++|||||||++|+|++|..||........ ...+.... ...+..+++++.++|.+||..||.+
T Consensus 184 PE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~----~~~i~~~~--~~~p~~~s~~~~~Li~~~L~~dP~~ 257 (476)
T 2y94_A 184 PEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHVPTL----FKKICDGI--FYTPQYLNPSVISLLKHMLQVDPMK 257 (476)
T ss_dssp HHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCCSSSHHH----HHHHHTTC--CCCCTTCCHHHHHHHHHHTCSSTTT
T ss_pred hhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCCCCHHHH----HHHHhcCC--cCCCccCCHHHHHHHHHHcCCCchh
Confidence 999997765 6799999999999999999988876422211 11111111 2345567889999999999999999
Q ss_pred CCCHHHHHHHH
Q 014478 232 RPNAKSLVISL 242 (424)
Q Consensus 232 Rps~~~~~~~l 242 (424)
|||+.+++++-
T Consensus 258 Rpt~~eil~hp 268 (476)
T 2y94_A 258 RATIKDIREHE 268 (476)
T ss_dssp SCCHHHHHTCH
T ss_pred CcCHHHHHhCH
Confidence 99999999763
|
| >3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-42 Score=325.12 Aligned_cols=229 Identities=17% Similarity=0.160 Sum_probs=184.9
Q ss_pred CCCcccceeee--ecceecccccCCCc---hhhhHHHHHHHHHhcC-CCcCcceeEEEEEeCCeeeEEEecCCCCCHHhH
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESSD---LGETLNLEEAKAVGNL-RSERLANLIGCCYEADERLLVAEFMPNETLAKH 75 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~~---~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~ 75 (424)
||||.||++.+ .+..|++|++.... .....+..|+..+.++ +||||++++++|.+++..++||||+ +++|.++
T Consensus 68 G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~~~~lv~e~~-~~~L~~~ 146 (311)
T 3p1a_A 68 GSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILYLQTELC-GPSLQQH 146 (311)
T ss_dssp ETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECC-CCBHHHH
T ss_pred CCCeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeCCEEEEEEecc-CCCHHHH
Confidence 89999999988 47778888765432 3344556666666666 8999999999999999999999999 6699998
Q ss_pred hccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCC---CccccCccCCC
Q 014478 76 LFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG---KSYSTNLAFTP 152 (424)
Q Consensus 76 l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~---~~~~gt~~y~a 152 (424)
+.. .+..+++..++.++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++..... ....||+.|+|
T Consensus 147 ~~~-~~~~l~~~~~~~i~~qi~~aL~~LH~~~-ivH~Dikp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~gt~~y~a 224 (311)
T 3p1a_A 147 CEA-WGASLPEAQVWGYLRDTLLALAHLHSQG-LVHLDVKPANIFLGPRGRCKLGDFGLLVELGTAGAGEVQEGDPRYMA 224 (311)
T ss_dssp HHH-HCSCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEECGGGCEEECCCTTCEECC------CCCCCGGGCC
T ss_pred HHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCC-EecCCCCHHHEEECCCCCEEEccceeeeecccCCCCcccCCCccccC
Confidence 865 3457999999999999999999999999 999999999999999999999999998876533 34568999999
Q ss_pred ccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHHHHHHHHHhcccCcCCC
Q 014478 153 PEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARER 232 (424)
Q Consensus 153 PE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~R 232 (424)
||++.+ .++.++|||||||++|||++|..++..... ...+.........+..+++++.++|.+||+.||++|
T Consensus 225 PE~~~~-~~~~~~DiwslG~il~el~~g~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R 296 (311)
T 3p1a_A 225 PELLQG-SYGTAADVFSLGLTILEVACNMELPHGGEG-------WQQLRQGYLPPEFTAGLSSELRSVLVMMLEPDPKLR 296 (311)
T ss_dssp GGGGGT-CCSTHHHHHHHHHHHHHHHHTCCCCSSHHH-------HHHHTTTCCCHHHHTTSCHHHHHHHHHHSCSSTTTS
T ss_pred HhHhcC-CCCchhhHHHHHHHHHHHHhCCCCCCCccH-------HHHHhccCCCcccccCCCHHHHHHHHHHcCCChhhC
Confidence 999885 789999999999999999999766654311 111111111112233467889999999999999999
Q ss_pred CCHHHHHHH
Q 014478 233 PNAKSLVIS 241 (424)
Q Consensus 233 ps~~~~~~~ 241 (424)
||+++++++
T Consensus 297 pt~~ell~h 305 (311)
T 3p1a_A 297 ATAEALLAL 305 (311)
T ss_dssp CCHHHHHTS
T ss_pred cCHHHHHhC
Confidence 999999864
|
| >2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-42 Score=325.10 Aligned_cols=246 Identities=18% Similarity=0.290 Sum_probs=201.0
Q ss_pred CCCcccceeee------ecceecccccCCCc-hhhhHHHHHHHHHhcCCCcCcceeEEEEEeCC--eeeEEEecCCCCCH
Q 014478 2 GGRCSKFSICW------FHCHLKSSVLESSD-LGETLNLEEAKAVGNLRSERLANLIGCCYEAD--ERLLVAEFMPNETL 72 (424)
Q Consensus 2 G~~g~v~~~~~------~~~~v~~~~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~--~~~lv~e~~~~gsL 72 (424)
|++|.||.+.+ .+..|++|++.... ...+.+.+|++++++++||||+++++++...+ ..++||||+++++|
T Consensus 52 G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~L 131 (326)
T 2w1i_A 52 GNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSL 131 (326)
T ss_dssp CSSEEEEEEEECTTSSSCCEEEEEEEESSCCSHHHHHHHHHHHHHHTCCCTTBCCEEEEECC----CCEEEECCCTTCBH
T ss_pred CCCeEEEEEEeccccCCCceEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEEecCCCceEEEEECCCCCCH
Confidence 89999999985 46678888876543 34678999999999999999999999987644 67899999999999
Q ss_pred HhHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCCC-------ccc
Q 014478 73 AKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGK-------SYS 145 (424)
Q Consensus 73 ~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~~-------~~~ 145 (424)
.+++.. ....+++.+++.++.|++.||.|||+++ ++||||||+||+++.++.+||+|||+++...... ...
T Consensus 132 ~~~l~~-~~~~~~~~~~~~i~~qi~~aL~~LH~~~-ivH~dikp~NIli~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~ 209 (326)
T 2w1i_A 132 RDYLQK-HKERIDHIKLLQYTSQICKGMEYLGTKR-YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGE 209 (326)
T ss_dssp HHHHHH-STTSSCHHHHHHHHHHHHHHHHHHHHTT-EECSCCCGGGEEEEETTEEEECCCTTCEECCSSCSEEECSSCCS
T ss_pred HHHHHh-cccCCCHHHHHHHHHHHHHHHHHHHhCC-EeccCCCcceEEEcCCCcEEEecCcchhhccccccccccccCCC
Confidence 999975 3456999999999999999999999999 9999999999999999999999999998765432 234
Q ss_pred cCccCCCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHh-----------hhhhhHhhhcccCCCCCchhH
Q 014478 146 TNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIR-----------SKNFLLLMDSALEGHFSNDEG 214 (424)
Q Consensus 146 gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~ 214 (424)
++..|+|||.+.+..++.++||||||+++|+|++|..|+......... .......+........+..++
T Consensus 210 ~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (326)
T 2w1i_A 210 SPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCP 289 (326)
T ss_dssp CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHHTTCGGGSHHHHHHHHHCTTCCTHHHHHHHHHHHHTTCCCCCCTTCC
T ss_pred CceeEECchhhcCCCCCchhhHHHHHHHHHHHHhcCCCCCCCHHHHHHhhccccchhhhHHHHHHHhhcCCCCCCCCccc
Confidence 677899999999888999999999999999999998776543111110 011222233333344566788
Q ss_pred HHHHHHHHHhcccCcCCCCCHHHHHHHHHHHhhhh
Q 014478 215 TELVRLASRCLQSEARERPNAKSLVISLMSLQKEA 249 (424)
Q Consensus 215 ~~l~~li~~cl~~dp~~Rps~~~~~~~l~~~~~~~ 249 (424)
+++.++|.+||..||++|||+.++++.|+.+.+..
T Consensus 290 ~~l~~li~~cl~~dP~~Rps~~el~~~L~~l~~~l 324 (326)
T 2w1i_A 290 DEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDQM 324 (326)
T ss_dssp HHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999987653
|
| >2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-42 Score=326.12 Aligned_cols=242 Identities=19% Similarity=0.264 Sum_probs=198.1
Q ss_pred CCCcccceeeee-------cceecccccCC--CchhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCH
Q 014478 2 GGRCSKFSICWF-------HCHLKSSVLES--SDLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETL 72 (424)
Q Consensus 2 G~~g~v~~~~~~-------~~~v~~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL 72 (424)
|++|.||.+.+. +..+++|++.. .......+.+|+.++++++||||+++++++......++||||+++|+|
T Consensus 41 G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L 120 (327)
T 2yfx_A 41 GAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDL 120 (327)
T ss_dssp -CSSCEEEEEC--------CCEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCTTEEH
T ss_pred CCCeeEEEEEEcCCCCCCccceEEEEEeccccchhhHHHHHHHHHHHhhCCCCCCCeEEEEEcCCCCcEEEEecCCCCcH
Confidence 899999999853 34588887753 334566889999999999999999999999999899999999999999
Q ss_pred HhHhccCCC-----CCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecC---CCCeEEccccccccCCC----
Q 014478 73 AKHLFHWET-----QPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDK---DGNPRLSSFGLMKNSRD---- 140 (424)
Q Consensus 73 ~~~l~~~~~-----~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~---~~~~kl~Dfg~~~~~~~---- 140 (424)
.+++..... ..+++.+++.++.|++.||.|||+++ ++||||||+|||++. +..+||+|||+++....
T Consensus 121 ~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~-i~H~dlkp~NIli~~~~~~~~~kl~Dfg~~~~~~~~~~~ 199 (327)
T 2yfx_A 121 KSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH-FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYY 199 (327)
T ss_dssp HHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEESCSSTTCCEEECCCHHHHHHHC----
T ss_pred HHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhhCC-eecCcCCHhHEEEecCCCcceEEECcccccccccccccc
Confidence 999975321 45899999999999999999999999 999999999999984 44699999999874322
Q ss_pred --CCccccCccCCCccccccCCCCCCcceehhHHHHHHHhh-CCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHHH
Q 014478 141 --GKSYSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTEL 217 (424)
Q Consensus 141 --~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 217 (424)
.....+|+.|+|||++.+..++.++|||||||++|+|++ |..||...... .....+........+..++..+
T Consensus 200 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~l 274 (327)
T 2yfx_A 200 RKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQ-----EVLEFVTSGGRMDPPKNCPGPV 274 (327)
T ss_dssp --CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHH-----HHHHHHHTTCCCCCCTTCCHHH
T ss_pred ccCCCcCCCcceeCHhHhcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCcCHH-----HHHHHHhcCCCCCCCCCCCHHH
Confidence 233457889999999998899999999999999999998 88777654221 1222222233334556778899
Q ss_pred HHHHHHhcccCcCCCCCHHHHHHHHHHHhhhh
Q 014478 218 VRLASRCLQSEARERPNAKSLVISLMSLQKEA 249 (424)
Q Consensus 218 ~~li~~cl~~dp~~Rps~~~~~~~l~~~~~~~ 249 (424)
.++|.+||+.||.+|||+.+++++|+.+....
T Consensus 275 ~~li~~~l~~dp~~Rps~~~ll~~l~~~~~~~ 306 (327)
T 2yfx_A 275 YRIMTQCWQHQPEDRPNFAIILERIEYCTQDP 306 (327)
T ss_dssp HHHHHHHTCSSGGGSCCHHHHHHHHHHHHHCH
T ss_pred HHHHHHHhcCChhhCcCHHHHHHHHHHHhcCH
Confidence 99999999999999999999999999887653
|
| >2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-42 Score=321.42 Aligned_cols=240 Identities=15% Similarity=0.180 Sum_probs=191.0
Q ss_pred CCCcccceeee--ecceecccccCCCc----hhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHhH
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESSD----LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKH 75 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~~----~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~ 75 (424)
|++|.||.+.+ .+..+++|++.... ...+.+.+|+.++++++||||+++++++..++..++||||++|++|.++
T Consensus 45 G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~ 124 (309)
T 2h34_A 45 GGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEIDGQLYVDMRLINGVDLAAM 124 (309)
T ss_dssp CSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECCCCEEHHHH
T ss_pred CCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeCCeEEEEEEecCCCCHHHH
Confidence 89999999987 46678888775432 2246788999999999999999999999999999999999999999999
Q ss_pred hccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCC-----CccccCccC
Q 014478 76 LFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG-----KSYSTNLAF 150 (424)
Q Consensus 76 l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~-----~~~~gt~~y 150 (424)
+.. ..++++.+++.++.|++.||.|||+++ ++||||||+||+++.++.+||+|||++...... ....||+.|
T Consensus 125 l~~--~~~~~~~~~~~i~~qi~~~l~~lH~~~-i~H~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y 201 (309)
T 2h34_A 125 LRR--QGPLAPPRAVAIVRQIGSALDAAHAAG-ATHRDVKPENILVSADDFAYLVDFGIASATTDEKLTQLGNTVGTLYY 201 (309)
T ss_dssp HHH--HCSCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEECTTSCEEECSCCC----------------CCGGG
T ss_pred HHh--cCCCCHHHHHHHHHHHHHHHHHHHHCc-CCcCCCChHHEEEcCCCCEEEecCccCccccccccccccccCCCcCc
Confidence 965 457999999999999999999999999 999999999999999999999999998765432 234689999
Q ss_pred CCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhcc--cCCCCCchhHHHHHHHHHHhcccC
Q 014478 151 TPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSA--LEGHFSNDEGTELVRLASRCLQSE 228 (424)
Q Consensus 151 ~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~li~~cl~~d 228 (424)
+|||.+.+..++.++||||||+++|+|++|..||......... ..+... .....+..+++++.++|.+||+.|
T Consensus 202 ~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~d 276 (309)
T 2h34_A 202 MAPERFSESHATYRADIYALTCVLYECLTGSPPYQGDQLSVMG-----AHINQAIPRPSTVRPGIPVAFDAVIARGMAKN 276 (309)
T ss_dssp CCGGGTCC----CCCHHHHHHHHHHHHHHSSCSSCSCHHHHHH-----HHHHSCCCCGGGTSTTCCTHHHHHHHHHTCSS
T ss_pred cCHHHHcCCCCCchHhHHHHHHHHHHHHHCCCCCCCchHHHHH-----HHhccCCCCccccCCCCCHHHHHHHHHhccCC
Confidence 9999999888999999999999999999999888765332111 111111 111234556789999999999999
Q ss_pred cCCCC-CHHHHHHHHHHHhhhh
Q 014478 229 ARERP-NAKSLVISLMSLQKEA 249 (424)
Q Consensus 229 p~~Rp-s~~~~~~~l~~~~~~~ 249 (424)
|++|| |++++++.|+......
T Consensus 277 P~~Rp~s~~~l~~~l~~~l~~~ 298 (309)
T 2h34_A 277 PEDRYVTCGDLSAAAHAALATA 298 (309)
T ss_dssp GGGSCSSHHHHHHHHHHTCC--
T ss_pred HHHHHHhHHHHHHHHHHHHHhh
Confidence 99999 9999999998876553
|
| >2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-42 Score=320.24 Aligned_cols=234 Identities=19% Similarity=0.268 Sum_probs=195.5
Q ss_pred CCCcccceeeee--cceecccccCCCchhhhHHHHHHHHHhcCCCcCcceeEEEEEe----------------CCeeeEE
Q 014478 2 GGRCSKFSICWF--HCHLKSSVLESSDLGETLNLEEAKAVGNLRSERLANLIGCCYE----------------ADERLLV 63 (424)
Q Consensus 2 G~~g~v~~~~~~--~~~v~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~----------------~~~~~lv 63 (424)
|++|.||.+.+. +..+++|++.... +.+.+|++++++++||||+++++++.. ....++|
T Consensus 22 G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv 98 (284)
T 2a19_B 22 GGFGQVFKAKHRIDGKTYVIKRVKYNN---EKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETSSKNSSRSKTKCLFIQ 98 (284)
T ss_dssp SSSCCEEEEEETTTCCEEEEEEEECCS---GGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC---------CCEEEEEEEE
T ss_pred CCceEEEEEEEcCCCeEEEEEEecccc---HHHHHHHHHHHhCCCCCEEEEeeeEeccccCcccccccccccCcceEEEE
Confidence 899999999984 7778888776543 467789999999999999999999864 3457899
Q ss_pred EecCCCCCHHhHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCC--
Q 014478 64 AEFMPNETLAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG-- 141 (424)
Q Consensus 64 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~-- 141 (424)
|||+++|+|.+++.......+++..++.++.|++.||.|||+++ ++||||||+||+++.++.+||+|||++......
T Consensus 99 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~-i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 177 (284)
T 2a19_B 99 MEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSKK-LINRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGK 177 (284)
T ss_dssp ECCCCSCBHHHHHHHGGGSCCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEEEETTEEEECCCTTCEESSCCSC
T ss_pred EeccCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhCC-eeeccCCHHHEEEcCCCCEEECcchhheecccccc
Confidence 99999999999997544567999999999999999999999999 999999999999999999999999998876543
Q ss_pred -CccccCccCCCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHHHHHH
Q 014478 142 -KSYSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRL 220 (424)
Q Consensus 142 -~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 220 (424)
....||+.|+|||.+.+..++.++||||||+++|+|++|..|+.... ...... .....+..++.++.++
T Consensus 178 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~------~~~~~~----~~~~~~~~~~~~~~~l 247 (284)
T 2a19_B 178 RTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFETS------KFFTDL----RDGIISDIFDKKEKTL 247 (284)
T ss_dssp CCCCCSCCTTSCHHHHHCSCCCTHHHHHHHHHHHHHHHSCCSSHHHHH------HHHHHH----HTTCCCTTSCHHHHHH
T ss_pred ccccCCcccccChhhhccCCCcchhhhHHHHHHHHHHHhcCCcchhHH------HHHHHh----hcccccccCCHHHHHH
Confidence 34568999999999998889999999999999999999986653211 111111 1223445567789999
Q ss_pred HHHhcccCcCCCCCHHHHHHHHHHHhhhh
Q 014478 221 ASRCLQSEARERPNAKSLVISLMSLQKEA 249 (424)
Q Consensus 221 i~~cl~~dp~~Rps~~~~~~~l~~~~~~~ 249 (424)
|.+||+.||.+|||+.+++++|+.+.+..
T Consensus 248 i~~~l~~dp~~Rps~~e~l~~l~~~~~~~ 276 (284)
T 2a19_B 248 LQKLLSKKPEDRPNTSEILRTLTVWKKSP 276 (284)
T ss_dssp HHHHTCSSGGGSCCHHHHHHHHHHHTC--
T ss_pred HHHHccCChhhCcCHHHHHHHHHHHhhCC
Confidence 99999999999999999999999887653
|
| >1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-42 Score=320.48 Aligned_cols=231 Identities=15% Similarity=0.180 Sum_probs=193.3
Q ss_pred CCCcccceeee--ecceecccccCCC---chhhhHHHHHHHHHhcC-CCcCcceeEEEEEeCCeeeEEEecCCCCCHHhH
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESS---DLGETLNLEEAKAVGNL-RSERLANLIGCCYEADERLLVAEFMPNETLAKH 75 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~---~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~ 75 (424)
|++|.||.+.+ .+..+++|++... ......+.+|+..+..+ +||||+++++++.+.+..++||||+++|+|.++
T Consensus 22 G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~ 101 (289)
T 1x8b_A 22 GEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADA 101 (289)
T ss_dssp ETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETTEEEEEEECCTTCBHHHH
T ss_pred CCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEEEEecCCCcHHHH
Confidence 89999999988 4777888877543 33466788999999999 999999999999999999999999999999999
Q ss_pred hccCC--CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCC-------------------CCeEEccccc
Q 014478 76 LFHWE--TQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKD-------------------GNPRLSSFGL 134 (424)
Q Consensus 76 l~~~~--~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~-------------------~~~kl~Dfg~ 134 (424)
+.... ...+++.+++.++.||+.||.|||+++ |+||||||+|||++.+ ..+||+|||+
T Consensus 102 l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~-ivH~Dikp~NIl~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~ 180 (289)
T 1x8b_A 102 ISENYRIMSYFKEAELKDLLLQVGRGLRYIHSMS-LVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGH 180 (289)
T ss_dssp HHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEEC--------------------CCCEEECCCTT
T ss_pred HHhhcccccCCCHHHHHHHHHHHHHHHHHHHhCC-EeecCCCHHHEEEcCCCCCcccccccccccccCCceEEEEccccc
Confidence 96421 257899999999999999999999999 9999999999999844 4799999999
Q ss_pred cccCCCCCccccCccCCCccccccC-CCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhcccCCCCCchh
Q 014478 135 MKNSRDGKSYSTNLAFTPPEYMRTG-RVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDE 213 (424)
Q Consensus 135 ~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 213 (424)
+..........||+.|+|||++.+. .++.++|||||||++|+|++|..++.... .... +........+..+
T Consensus 181 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~-------~~~~-~~~~~~~~~~~~~ 252 (289)
T 1x8b_A 181 VTRISSPQVEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNGD-------QWHE-IRQGRLPRIPQVL 252 (289)
T ss_dssp CEETTCSCCCCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCCCCCSSSH-------HHHH-HHTTCCCCCSSCC
T ss_pred ccccCCccccCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHhcCCCCCcchh-------HHHH-HHcCCCCCCCccc
Confidence 9988777777899999999999866 56789999999999999999986554321 1111 1122233456667
Q ss_pred HHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 014478 214 GTELVRLASRCLQSEARERPNAKSLVIS 241 (424)
Q Consensus 214 ~~~l~~li~~cl~~dp~~Rps~~~~~~~ 241 (424)
++++.++|.+||+.||++|||+.+++++
T Consensus 253 ~~~~~~li~~~l~~dp~~Rps~~~ll~h 280 (289)
T 1x8b_A 253 SQEFTELLKVMIHPDPERRPSAMALVKH 280 (289)
T ss_dssp CHHHHHHHHHHTCSSGGGSCCHHHHHTC
T ss_pred CHHHHHHHHHHhCCCcccCCCHHHHhhC
Confidence 8899999999999999999999999865
|
| >2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-42 Score=325.78 Aligned_cols=233 Identities=15% Similarity=0.150 Sum_probs=193.1
Q ss_pred CCCcccceeee--ecceecccccCCCch-------hhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCH
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESSDL-------GETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETL 72 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~~~-------~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL 72 (424)
|++|.||.+.+ .+..+++|++..... ..+.+.+|+.++++++||||+++++++......++||||+++++|
T Consensus 23 G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L 102 (321)
T 2a2a_A 23 GQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGEL 102 (321)
T ss_dssp CSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCCSCBH
T ss_pred cCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEEEEEEEcCCCCcH
Confidence 89999999987 466788877744321 356789999999999999999999999999999999999999999
Q ss_pred HhHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCC----CeEEccccccccCCCC---Cccc
Q 014478 73 AKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDG----NPRLSSFGLMKNSRDG---KSYS 145 (424)
Q Consensus 73 ~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~----~~kl~Dfg~~~~~~~~---~~~~ 145 (424)
.+++.. ...+++..++.++.|++.||.|||+++ ++||||||+||+++.++ .+||+|||+++..... ....
T Consensus 103 ~~~l~~--~~~~~~~~~~~i~~qi~~aL~~lH~~~-ivH~dikp~NIl~~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 179 (321)
T 2a2a_A 103 FDFLAQ--KESLSEEEATSFIKQILDGVNYLHTKK-IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIF 179 (321)
T ss_dssp HHHHHT--CSCEEHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEESCTTSSSCCEEECCCTTCEECCTTCCCCCCC
T ss_pred HHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCChHHEEEecCCCCcCCEEEccCccceecCccccccccC
Confidence 999964 567899999999999999999999999 99999999999999887 7999999999876543 3456
Q ss_pred cCccCCCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhccc--CCCCCchhHHHHHHHHHH
Q 014478 146 TNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSAL--EGHFSNDEGTELVRLASR 223 (424)
Q Consensus 146 gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~li~~ 223 (424)
||+.|+|||++.+..++.++|||||||++|+|++|..||.......... .+..... ....+..+++.+.++|.+
T Consensus 180 gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~----~i~~~~~~~~~~~~~~~~~~~~~li~~ 255 (321)
T 2a2a_A 180 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLA----NITSVSYDFDEEFFSHTSELAKDFIRK 255 (321)
T ss_dssp SCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHH----HHHTTCCCCCHHHHTTCCHHHHHHHHT
T ss_pred CCCCccCcccccCCCCCCccccHHHHHHHHHHHHCCCCCCCCCHHHHHH----HHHhcccccChhhhcccCHHHHHHHHH
Confidence 8999999999998889999999999999999999998887642221111 1111110 001113456789999999
Q ss_pred hcccCcCCCCCHHHHHHH
Q 014478 224 CLQSEARERPNAKSLVIS 241 (424)
Q Consensus 224 cl~~dp~~Rps~~~~~~~ 241 (424)
||..||++|||+.+++++
T Consensus 256 ~l~~dp~~Rps~~e~l~h 273 (321)
T 2a2a_A 256 LLVKETRKRLTIQEALRH 273 (321)
T ss_dssp TSCSSTTTSCCHHHHHHS
T ss_pred HcCCChhhCcCHHHHhcC
Confidence 999999999999999865
|
| >4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.3e-43 Score=341.81 Aligned_cols=231 Identities=20% Similarity=0.255 Sum_probs=187.5
Q ss_pred CCCcccceeee--ecceecccccCCC----chhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHhH
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESS----DLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKH 75 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~----~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~ 75 (424)
|+||.||.+.. .+..|++|++... ......+.+|+++++.++||||++++++|...+..++||||++||+|.++
T Consensus 159 G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~~~L~~~ 238 (446)
T 4ejn_A 159 GTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFH 238 (446)
T ss_dssp ETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEEETTEEEEEECCCSSCBHHHH
T ss_pred CcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeCCEEEEEEeeCCCCcHHHH
Confidence 89999999887 5677888887532 23346778899999999999999999999999999999999999999999
Q ss_pred hccCCCCCCCHHHHHHHHHHHHHHHHHHHh-CCCcccccCCCCCeeecCCCCeEEccccccccCCC----CCccccCccC
Q 014478 76 LFHWETQPMKWAMRLRVALYLAQALEYCSS-KGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRD----GKSYSTNLAF 150 (424)
Q Consensus 76 l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~-~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~----~~~~~gt~~y 150 (424)
+.. ...+++..+..++.||+.||.|||+ ++ |+||||||+|||++.++.+||+|||+++.... .....||+.|
T Consensus 239 l~~--~~~~~~~~~~~~~~qi~~aL~~LH~~~g-iiHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~~gt~~y 315 (446)
T 4ejn_A 239 LSR--ERVFSEDRARFYGAEIVSALDYLHSEKN-VVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFCGTPEY 315 (446)
T ss_dssp HHH--HSCCCHHHHHHHHHHHHHHHHHHHHHTC-CCCCCCCGGGEEECSSSCEEECCCCCCCTTCC-----CCSSSCGGG
T ss_pred HHh--cCCCCHHHHHHHHHHHHHHHHHHhhcCC-EEECCCCHHHEEECCCCCEEEccCCCceeccCCCcccccccCCccc
Confidence 965 4579999999999999999999998 88 99999999999999999999999999986432 2345789999
Q ss_pred CCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHHHHHHHHHhcccCcC
Q 014478 151 TPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEAR 230 (424)
Q Consensus 151 ~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~ 230 (424)
+|||++.+..++.++|||||||++|||++|..||.......... .+... ....+..+++++.+||.+||+.||.
T Consensus 316 ~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~----~i~~~--~~~~p~~~~~~~~~li~~~L~~dP~ 389 (446)
T 4ejn_A 316 LAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFE----LILME--EIRFPRTLGPEAKSLLSGLLKKDPK 389 (446)
T ss_dssp CCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHH----HHHHC--CCCCCTTSCHHHHHHHHHHTCSSTT
T ss_pred cCHhhcCCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHHHHHH----HHHhC--CCCCCccCCHHHHHHHHHHcccCHH
Confidence 99999998999999999999999999999999887643222111 11111 2235566788999999999999999
Q ss_pred CCC-----CHHHHHHH
Q 014478 231 ERP-----NAKSLVIS 241 (424)
Q Consensus 231 ~Rp-----s~~~~~~~ 241 (424)
+|| |++++++|
T Consensus 390 ~R~~~~~~t~~ell~h 405 (446)
T 4ejn_A 390 QRLGGGSEDAKEIMQH 405 (446)
T ss_dssp TSTTCSTTTHHHHHTS
T ss_pred HhCCCCCCCHHHHHhC
Confidence 999 99999875
|
| >2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.6e-43 Score=332.27 Aligned_cols=241 Identities=17% Similarity=0.107 Sum_probs=186.5
Q ss_pred CCCcccceeee-----ecceecccccCCCch------------hhhHHHHHHHHHhcCCCcCcceeEEEEEe----CCee
Q 014478 2 GGRCSKFSICW-----FHCHLKSSVLESSDL------------GETLNLEEAKAVGNLRSERLANLIGCCYE----ADER 60 (424)
Q Consensus 2 G~~g~v~~~~~-----~~~~v~~~~~~~~~~------------~~~~~~~E~~~l~~l~h~~iv~~~~~~~~----~~~~ 60 (424)
|+||.||.+.+ .+..+++|+...... ....+.+|+..+..++||||+++++++.. ....
T Consensus 48 G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~~~~~~~~~~~~~ 127 (345)
T 2v62_A 48 GGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYGSGLTEFKGRSYR 127 (345)
T ss_dssp ----CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEEEEEEESSSCEEE
T ss_pred cCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeecccccccCCCcEE
Confidence 89999999998 345566676654321 12346778899999999999999999988 6778
Q ss_pred eEEEecCCCCCHHhHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCC--CeEEccccccccC
Q 014478 61 LLVAEFMPNETLAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDG--NPRLSSFGLMKNS 138 (424)
Q Consensus 61 ~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~--~~kl~Dfg~~~~~ 138 (424)
++||||+ +++|.+++.. ...+++.+++.++.||+.||.|||+++ |+||||||+|||++.++ .+||+|||+++..
T Consensus 128 ~lv~e~~-~~~L~~~l~~--~~~~~~~~~~~i~~qi~~aL~~LH~~~-ivH~Dlkp~NIll~~~~~~~~kL~Dfg~a~~~ 203 (345)
T 2v62_A 128 FMVMERL-GIDLQKISGQ--NGTFKKSTVLQLGIRMLDVLEYIHENE-YVHGDIKAANLLLGYKNPDQVYLADYGLSYRY 203 (345)
T ss_dssp EEEEECE-EEEHHHHCBG--GGBCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEEESSSTTSEEECCCTTCEES
T ss_pred EEEEecc-CCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCC-eeCCCcCHHHEEEccCCCCcEEEEeCCCceec
Confidence 9999999 9999999975 338999999999999999999999999 99999999999998877 9999999999765
Q ss_pred CCC-----------CccccCccCCCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhcccC-
Q 014478 139 RDG-----------KSYSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALE- 206 (424)
Q Consensus 139 ~~~-----------~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~- 206 (424)
... ....||+.|+|||++.+..++.++|||||||++|||++|..||......................
T Consensus 204 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 283 (345)
T 2v62_A 204 CPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPWEQNLKDPVAVQTAKTNLLDELPQ 283 (345)
T ss_dssp SGGGCCCCCCCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCTTGGGTTCHHHHHHHHHHHHHTTTH
T ss_pred ccccccccchhccccccCCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCccccccccHHHHHHHHhhcccccH
Confidence 321 23468999999999998889999999999999999999998885421111111111111100000
Q ss_pred ----CCCCchhHHHHHHHHHHhcccCcCCCCCHHHHHHHHHHHh
Q 014478 207 ----GHFSNDEGTELVRLASRCLQSEARERPNAKSLVISLMSLQ 246 (424)
Q Consensus 207 ----~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~~~~~l~~~~ 246 (424)
......+++++.+++.+||..||++|||+.++++.|+.+.
T Consensus 284 ~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~ 327 (345)
T 2v62_A 284 SVLKWAPSGSSCCEIAQFLVCAHSLAYDEKPNYQALKKILNPHG 327 (345)
T ss_dssp HHHHHSCTTSCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHCTTC
T ss_pred HHHhhccccccHHHHHHHHHHHhhcCcccCCCHHHHHHHHhccC
Confidence 0011156779999999999999999999999999987653
|
| >3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.5e-42 Score=319.75 Aligned_cols=237 Identities=14% Similarity=0.136 Sum_probs=188.9
Q ss_pred CCCcccceeee--ecceecccccCCCc------hhhhHHHHHHHHHhcCC---CcCcceeEEEEEeCC-----eeeEEEe
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESSD------LGETLNLEEAKAVGNLR---SERLANLIGCCYEAD-----ERLLVAE 65 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~~------~~~~~~~~E~~~l~~l~---h~~iv~~~~~~~~~~-----~~~lv~e 65 (424)
|+||.||.+.+ .+..|++|++.... .....+.+|+.+++.++ ||||++++++|.... ..++|||
T Consensus 20 G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~~~~~~~~~~~lv~e 99 (308)
T 3g33_A 20 GAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFE 99 (308)
T ss_dssp SSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEECCSSSEEEEEEEEE
T ss_pred CCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeeccCCCCceeEEEEeh
Confidence 89999999986 56778888775322 12346778888877774 999999999998765 4789999
Q ss_pred cCCCCCHHhHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCC---C
Q 014478 66 FMPNETLAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG---K 142 (424)
Q Consensus 66 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~---~ 142 (424)
|+. |+|.+++.......+++.+++.++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++..... .
T Consensus 100 ~~~-~~L~~~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~-ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~~ 177 (308)
T 3g33_A 100 HVD-QDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHANC-IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALT 177 (308)
T ss_dssp CCC-CBHHHHHHTCCTTCSCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCTTTEEECTTSCEEECSCSCTTTSTTCCCSG
T ss_pred hhh-cCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCCHHHEEEcCCCCEEEeeCccccccCCCcccC
Confidence 997 59999997655556999999999999999999999999 999999999999999999999999999865533 3
Q ss_pred ccccCccCCCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhcccCCC--------------
Q 014478 143 SYSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGH-------------- 208 (424)
Q Consensus 143 ~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------- 208 (424)
...||+.|+|||++.+..++.++|||||||++|+|++|..||............. ..........
T Consensus 178 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~-~~~~~~~~~~~~~~~~~~~~~~~~ 256 (308)
T 3g33_A 178 PVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIF-DLIGLPPEDDWPRDVSLPRGAFPP 256 (308)
T ss_dssp GGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTTTSSCSCCCSSHHHHHHHHH-HHHCCCCTTTSCSSCSSCGGGSCC
T ss_pred CccccccccCchHHcCCCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH-HHhCCCChhhccchhhccccccCC
Confidence 3568999999999998899999999999999999999998887653222211111 1110000000
Q ss_pred --------CCchhHHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 014478 209 --------FSNDEGTELVRLASRCLQSEARERPNAKSLVIS 241 (424)
Q Consensus 209 --------~~~~~~~~l~~li~~cl~~dp~~Rps~~~~~~~ 241 (424)
....+++++.+||.+||+.||++|||+.+++++
T Consensus 257 ~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 297 (308)
T 3g33_A 257 RGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQH 297 (308)
T ss_dssp CCCCCHHHHSCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred CCCCcHHHhCccccHHHHHHHHHHhcCCCccCCCHHHHhcC
Confidence 112456889999999999999999999999865
|
| >2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.1e-43 Score=336.25 Aligned_cols=236 Identities=16% Similarity=0.117 Sum_probs=191.8
Q ss_pred CCCcccceeee--ecceecccccCCCc----hhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHhH
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESSD----LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKH 75 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~~----~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~ 75 (424)
|+||.||.+.. .+..+++|++.... .....+.+|..++..++||||+++++++.+.+..|+||||++||+|.++
T Consensus 72 G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~~~~~lVmE~~~gg~L~~~ 151 (412)
T 2vd5_A 72 GAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAFQDENYLYLVMEYYVGGDLLTL 151 (412)
T ss_dssp CSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEEECSSEEEEEECCCCSCBHHHH
T ss_pred CCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEEEcCCCCCcHHHH
Confidence 89999999987 57778888875432 2345688999999999999999999999999999999999999999999
Q ss_pred hccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCC-----CccccCccC
Q 014478 76 LFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG-----KSYSTNLAF 150 (424)
Q Consensus 76 l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~-----~~~~gt~~y 150 (424)
+.+ .+..+++..+..++.||+.||.|||+++ |+||||||+|||++.+|++||+|||+++..... ....||+.|
T Consensus 152 l~~-~~~~l~~~~~~~~~~qi~~aL~~LH~~g-iiHrDLKp~NILld~~g~vkL~DFGla~~~~~~~~~~~~~~~Gt~~Y 229 (412)
T 2vd5_A 152 LSK-FGERIPAEMARFYLAEIVMAIDSVHRLG-YVHRDIKPDNILLDRCGHIRLADFGSCLKLRADGTVRSLVAVGTPDY 229 (412)
T ss_dssp HHH-HSSCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEECTTSCEEECCCTTCEECCTTSCEECSSCCSCGGG
T ss_pred HHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCC-eeecccCHHHeeecCCCCEEEeechhheeccCCCccccceeccccCc
Confidence 965 2357999999999999999999999999 999999999999999999999999999876543 235799999
Q ss_pred CCccccc-------cCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHHHHHHHHH
Q 014478 151 TPPEYMR-------TGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASR 223 (424)
Q Consensus 151 ~aPE~~~-------~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 223 (424)
+|||++. ...++.++|||||||++|||++|+.||........-..... ..........+..+++++.+||.+
T Consensus 230 ~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~i~~-~~~~~~~p~~~~~~s~~~~dli~~ 308 (412)
T 2vd5_A 230 LSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTAETYGKIVH-YKEHLSLPLVDEGVPEEARDFIQR 308 (412)
T ss_dssp CCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHT-HHHHCCCC----CCCHHHHHHHHT
T ss_pred CCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCCCCHHHHHHHHHh-cccCcCCCccccCCCHHHHHHHHH
Confidence 9999997 35689999999999999999999999876532222111111 001111112234678899999999
Q ss_pred hcccCcCCC---CCHHHHHHH
Q 014478 224 CLQSEARER---PNAKSLVIS 241 (424)
Q Consensus 224 cl~~dp~~R---ps~~~~~~~ 241 (424)
||. +|.+| |+++++++|
T Consensus 309 lL~-~p~~Rlgr~~~~ei~~H 328 (412)
T 2vd5_A 309 LLC-PPETRLGRGGAGDFRTH 328 (412)
T ss_dssp TSS-CGGGCTTTTTHHHHHTS
T ss_pred HcC-ChhhcCCCCCHHHHhcC
Confidence 999 99998 589999865
|
| >2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.8e-43 Score=346.75 Aligned_cols=237 Identities=21% Similarity=0.275 Sum_probs=198.4
Q ss_pred CCCcccceeee--ecceecccccCCCc----hhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHhH
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESSD----LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKH 75 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~~----~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~ 75 (424)
|+||.||.+.+ .+..+++|++.... .....+.+|+++|+.++||||+++++++.+.+..++||||++||+|.++
T Consensus 195 G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lVmEy~~gg~L~~~ 274 (576)
T 2acx_A 195 GGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFH 274 (576)
T ss_dssp ETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCCSCBHHHH
T ss_pred CCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEeeCCEEEEEEEcCCCCcHHHH
Confidence 89999999987 56778888875432 2345688999999999999999999999999999999999999999999
Q ss_pred hccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCC---CccccCccCCC
Q 014478 76 LFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG---KSYSTNLAFTP 152 (424)
Q Consensus 76 l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~---~~~~gt~~y~a 152 (424)
+.......+++..++.++.||+.||.|||+++ |+||||||+|||++.+|.+||+|||+++..... ....||+.|+|
T Consensus 275 l~~~~~~~l~e~~~~~i~~qIl~aL~yLH~~g-IvHrDLKPeNILld~~g~vKL~DFGla~~~~~~~~~~~~~GT~~Y~A 353 (576)
T 2acx_A 275 IYHMGQAGFPEARAVFYAAEICCGLEDLHRER-IVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKGRVGTVGYMA 353 (576)
T ss_dssp HHSSSSCCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEECTTSCEEECCCTTCEECCTTCCEECCCSCGGGCC
T ss_pred HHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCC-EeccCCchheEEEeCCCCeEEEecccceecccCccccccCCCccccC
Confidence 97654556999999999999999999999999 999999999999999999999999999876543 24578999999
Q ss_pred ccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHHHHHHHHHhcccCcCCC
Q 014478 153 PEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARER 232 (424)
Q Consensus 153 PE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~R 232 (424)
||++.+..++.++|||||||++|||++|..||......... ..+...+. .....++..+++++.+||.+||..||.+|
T Consensus 354 PEvl~~~~~~~~~DiwSLGvilyeLltG~~PF~~~~~~~~~-~~i~~~i~-~~~~~~p~~~s~~~~dLI~~lL~~dP~~R 431 (576)
T 2acx_A 354 PEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKR-EEVERLVK-EVPEEYSERFSPQARSLCSQLLCKDPAER 431 (576)
T ss_dssp HHHHTTCEESSHHHHHHHHHHHHHHHHSSCSSSCSSSCCCH-HHHHHHHH-HCCCCCCTTSCHHHHHHHHHHTCSSGGGS
T ss_pred HHHHcCCCCCccchHHHHHHHHHHHHhCCCCCcccccchhH-HHHHHHhh-cccccCCccCCHHHHHHHHHhccCCHHHc
Confidence 99999888999999999999999999999888764211000 11111111 12334566788999999999999999999
Q ss_pred C-----CHHHHHHH
Q 014478 233 P-----NAKSLVIS 241 (424)
Q Consensus 233 p-----s~~~~~~~ 241 (424)
| +++++++|
T Consensus 432 ~g~~~~sa~eil~H 445 (576)
T 2acx_A 432 LGCRGGSAREVKEH 445 (576)
T ss_dssp TTCSSSHHHHHHTS
T ss_pred CCCCCCCHHHHHhC
Confidence 9 78888865
|
| >3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=4.5e-42 Score=315.71 Aligned_cols=233 Identities=20% Similarity=0.249 Sum_probs=193.1
Q ss_pred CCCcccceeeee--cceecccccCCCc----hhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHhH
Q 014478 2 GGRCSKFSICWF--HCHLKSSVLESSD----LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKH 75 (424)
Q Consensus 2 G~~g~v~~~~~~--~~~v~~~~~~~~~----~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~ 75 (424)
|++|.||.+.+. +..+++|++.... .....+.+|+.++++++||||+++++++.+....++||||+++|+|.++
T Consensus 20 G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~ 99 (279)
T 3fdn_A 20 GKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRE 99 (279)
T ss_dssp CSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEECCCTTEEHHHH
T ss_pred CCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEecCCEEEEEEecCCCCcHHHH
Confidence 899999999884 4457777764332 2245788999999999999999999999999999999999999999999
Q ss_pred hccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCC--CccccCccCCCc
Q 014478 76 LFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG--KSYSTNLAFTPP 153 (424)
Q Consensus 76 l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~--~~~~gt~~y~aP 153 (424)
+.. ...+++..++.++.|++.||.|||+++ ++||||||+||+++.++.+||+|||++...... ....||+.|+||
T Consensus 100 l~~--~~~~~~~~~~~~~~qi~~~l~~LH~~~-i~H~dlkp~Nili~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~y~aP 176 (279)
T 3fdn_A 100 LQK--LSKFDEQRTATYITELANALSYCHSKR-VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLCGTLDYLPP 176 (279)
T ss_dssp HHH--HSSCCHHHHHHHHHHHHHHHHHHHTTT-CEECCCCGGGEEECTTSCEEECSCCEESCC--------CCCCTTCCH
T ss_pred HHh--cCCCCHHHHHHHHHHHHHHHHHHHhCC-EecccCChHhEEEcCCCCEEEEeccccccCCcccccccCCCCCccCH
Confidence 865 357999999999999999999999999 999999999999999999999999998665433 345789999999
Q ss_pred cccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHHHHHHHHHhcccCcCCCC
Q 014478 154 EYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERP 233 (424)
Q Consensus 154 E~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rp 233 (424)
|.+.+..++.++||||||+++|+|++|..||........... .. ......+..+++++.++|.+||+.||.+||
T Consensus 177 E~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~----~~--~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp 250 (279)
T 3fdn_A 177 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKR----IS--RVEFTFPDFVTEGARDLISRLLKHNPSQRP 250 (279)
T ss_dssp HHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHH----HH--HTCCCCCTTSCHHHHHHHHHHCCSSGGGSC
T ss_pred hHhccCCCCccchhHhHHHHHHHHHHCCCCCCCCcHHHHHHH----HH--hCCCCCCCcCCHHHHHHHHHHhccChhhCC
Confidence 999988899999999999999999999988876432211111 11 122344566788999999999999999999
Q ss_pred CHHHHHHHHH
Q 014478 234 NAKSLVISLM 243 (424)
Q Consensus 234 s~~~~~~~l~ 243 (424)
|+.+++++-.
T Consensus 251 s~~e~l~h~~ 260 (279)
T 3fdn_A 251 MLREVLEHPW 260 (279)
T ss_dssp CHHHHHHCHH
T ss_pred CHHHHhhCcc
Confidence 9999998744
|
| >3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.9e-42 Score=316.89 Aligned_cols=236 Identities=14% Similarity=0.160 Sum_probs=194.2
Q ss_pred CCCcccceeee--ecceecccccCCCc---hhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHhHh
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESSD---LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHL 76 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~~---~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~l 76 (424)
|++|.||.+.+ .+..+++|++.... .....+.+|++++++++||||+++++++..++..++||||+++++|.+++
T Consensus 17 G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~l~~~~ 96 (284)
T 3kk8_A 17 GAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDI 96 (284)
T ss_dssp ETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHH
T ss_pred cCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcCCEEEEEEecCCCCCHHHHH
Confidence 89999999987 46678888775433 34567889999999999999999999999999999999999999999988
Q ss_pred ccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCC---eEEccccccccCCCCC---ccccCccC
Q 014478 77 FHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGN---PRLSSFGLMKNSRDGK---SYSTNLAF 150 (424)
Q Consensus 77 ~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~---~kl~Dfg~~~~~~~~~---~~~gt~~y 150 (424)
.. ...+++..+..++.|++.||.|||+++ ++||||||+||+++.++. +||+|||++....... ...||+.|
T Consensus 97 ~~--~~~~~~~~~~~~~~~i~~~l~~lH~~~-i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~y 173 (284)
T 3kk8_A 97 VA--REFYSEADASHCIQQILESIAYCHSNG-IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGY 173 (284)
T ss_dssp HH--HSSCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCCGGGEEESSSSTTCCEEECCCTTCEECCSSCBCCCSCSCGGG
T ss_pred Hh--cCCCCHHHHHHHHHHHHHHHHHHHHCC-cCcCCCCHHHEEEecCCCCCcEEEeeceeeEEcccCccccCCCCCcCC
Confidence 65 457999999999999999999999999 999999999999976654 9999999997765443 35789999
Q ss_pred CCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHHHHHHHHHhcccCcC
Q 014478 151 TPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEAR 230 (424)
Q Consensus 151 ~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~ 230 (424)
+|||.+.+..++.++||||||+++|+|++|..||.............. ............+++++.+++.+||+.||+
T Consensus 174 ~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~li~~~l~~dp~ 251 (284)
T 3kk8_A 174 LSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKA--GAYDYPSPEWDTVTPEAKSLIDSMLTVNPK 251 (284)
T ss_dssp CCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHH--TCCCCCTTTTTTSCHHHHHHHHHHSCSSTT
T ss_pred cCchhhcCCCCCcccchHHHHHHHHHHHHCCCCCCCCchhHHHHHHHh--ccccCCchhhcccCHHHHHHHHHHcccChh
Confidence 999999988899999999999999999999988876432222111110 011112222245678999999999999999
Q ss_pred CCCCHHHHHHHH
Q 014478 231 ERPNAKSLVISL 242 (424)
Q Consensus 231 ~Rps~~~~~~~l 242 (424)
+|||+.+++++-
T Consensus 252 ~Rps~~~~l~h~ 263 (284)
T 3kk8_A 252 KRITADQALKVP 263 (284)
T ss_dssp TSCCHHHHTTSH
T ss_pred hCCCHHHHhcCc
Confidence 999999999763
|
| >3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-42 Score=325.88 Aligned_cols=225 Identities=16% Similarity=0.143 Sum_probs=191.4
Q ss_pred CCCcccceeee--ecceecccccCCCch---------hhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCC
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESSDL---------GETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNE 70 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~~~---------~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g 70 (424)
|+||.||.+.+ .+..+++|++..... ....+.+|+.++++++||||+++++++...+..++||||+.+|
T Consensus 35 G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~g 114 (335)
T 3dls_A 35 GAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFENQGFFQLVMEKHGSG 114 (335)
T ss_dssp SSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCTTS
T ss_pred cCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEeeCCEEEEEEEeCCCC
Confidence 89999999976 567788887754431 3456788999999999999999999999999999999999777
Q ss_pred -CHHhHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCCC---cccc
Q 014478 71 -TLAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGK---SYST 146 (424)
Q Consensus 71 -sL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~~---~~~g 146 (424)
+|.+++.. ...+++..++.++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++...... ...|
T Consensus 115 ~~l~~~~~~--~~~l~~~~~~~i~~qi~~~L~~LH~~~-ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~~~~~~~~g 191 (335)
T 3dls_A 115 LDLFAFIDR--HPRLDEPLASYIFRQLVSAVGYLRLKD-IIHRDIKDENIVIAEDFTIKLIDFGSAAYLERGKLFYTFCG 191 (335)
T ss_dssp CBHHHHHHT--CCCCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEECTTSCEEECCCTTCEECCTTCCBCEECS
T ss_pred ccHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCC-eEEeccCHHHEEEcCCCcEEEeecccceECCCCCceeccCC
Confidence 99999964 457999999999999999999999999 9999999999999999999999999998765443 3468
Q ss_pred CccCCCccccccCCC-CCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHHHHHHHHHhc
Q 014478 147 NLAFTPPEYMRTGRV-TPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCL 225 (424)
Q Consensus 147 t~~y~aPE~~~~~~~-~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl 225 (424)
|+.|+|||++.+..+ +.++|||||||++|+|++|..||..... ... .....+..+++++.+||.+||
T Consensus 192 t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~----------~~~--~~~~~~~~~~~~l~~li~~~L 259 (335)
T 3dls_A 192 TIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEE----------TVE--AAIHPPYLVSKELMSLVSGLL 259 (335)
T ss_dssp CGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSSGGG----------GTT--TCCCCSSCCCHHHHHHHHHHT
T ss_pred CccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhhHHH----------HHh--hccCCCcccCHHHHHHHHHHc
Confidence 999999999998776 7899999999999999999988765210 111 111234456789999999999
Q ss_pred ccCcCCCCCHHHHHHH
Q 014478 226 QSEARERPNAKSLVIS 241 (424)
Q Consensus 226 ~~dp~~Rps~~~~~~~ 241 (424)
+.||++|||+.+++++
T Consensus 260 ~~dP~~Rps~~ell~h 275 (335)
T 3dls_A 260 QPVPERRTTLEKLVTD 275 (335)
T ss_dssp CSSGGGSCCHHHHHHC
T ss_pred cCChhhCcCHHHHhcC
Confidence 9999999999999976
|
| >2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-42 Score=323.33 Aligned_cols=238 Identities=18% Similarity=0.232 Sum_probs=187.2
Q ss_pred CCCcccceeee--ecceecccccCCCc--hhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHhHhc
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESSD--LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLF 77 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~~--~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~ 77 (424)
|++|.||.+.+ .+..+++|++.... .....+.+|++++++++||||+++++++..++..++||||++ |+|.+++.
T Consensus 16 G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~-~~L~~~l~ 94 (317)
T 2pmi_A 16 GTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVIHTENKLTLVFEFMD-NDLKKYMD 94 (317)
T ss_dssp ---CEEEEEECSSSCCEEEEEEEECCSTTCSCHHHHHHHHHHTTCCBTTBCCEEEEECCTTEEEEEEECCC-CBHHHHHH
T ss_pred CCCEEEEEEEECCCCcEEEEEEeecccccccHHHHHHHHHHHHhcCCCCcceEEEEEEECCeEEEEEEecC-CCHHHHHH
Confidence 89999999987 46778888775432 234678899999999999999999999999999999999998 59999885
Q ss_pred cC----CCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCC----CccccCcc
Q 014478 78 HW----ETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG----KSYSTNLA 149 (424)
Q Consensus 78 ~~----~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~----~~~~gt~~ 149 (424)
.. ....+++..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++..... ....||+.
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~-ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~t~~ 173 (317)
T 2pmi_A 95 SRTVGNTPRGLELNLVKYFQWQLLQGLAFCHENK-ILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTFSSEVVTLW 173 (317)
T ss_dssp HHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEECTTCCEEECCCSSCEETTSCCCCCCCCCSCCT
T ss_pred hccccccccCCCHHHHHHHHHHHHHHHHHHHHCC-eeeCCCChHHeEEcCCCCEEECcCccceecCCCcccCCCCccccc
Confidence 32 1246899999999999999999999999 999999999999999999999999999865432 34568999
Q ss_pred CCCccccccC-CCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhh----------------cc--------
Q 014478 150 FTPPEYMRTG-RVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMD----------------SA-------- 204 (424)
Q Consensus 150 y~aPE~~~~~-~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~----------------~~-------- 204 (424)
|+|||++.+. .++.++|||||||++|+|++|..||.................. ..
T Consensus 174 y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (317)
T 2pmi_A 174 YRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIFDIMGTPNESLWPSVTKLPKYNPNIQQRPPRD 253 (317)
T ss_dssp TCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCTTTCGGGGGCTTCCTTCCCCCCCC
T ss_pred ccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChhHhhhhhhhhhcccccccccchh
Confidence 9999999864 5899999999999999999999988765322111111000000 00
Q ss_pred ----cCCCCCchhHHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 014478 205 ----LEGHFSNDEGTELVRLASRCLQSEARERPNAKSLVIS 241 (424)
Q Consensus 205 ----~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~~~~~ 241 (424)
.....+..++.++.+||.+||+.||++|||+++++++
T Consensus 254 ~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~h 294 (317)
T 2pmi_A 254 LRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALHH 294 (317)
T ss_dssp SHHHHGGGCSSCCCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred HHHhhcccccccCCHHHHHHHHHHCCCCcccCCCHHHHhCC
Confidence 0001122456789999999999999999999999865
|
| >3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-42 Score=326.92 Aligned_cols=234 Identities=17% Similarity=0.216 Sum_probs=173.6
Q ss_pred CCCcccceeee--ecceecccccCCCchhhhHHHHHHHHHhcCC-CcCcceeEEEEEeCCeeeEEEecCCCCCHHhHhcc
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESSDLGETLNLEEAKAVGNLR-SERLANLIGCCYEADERLLVAEFMPNETLAKHLFH 78 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~ 78 (424)
|+||.||.+.+ .+..+++|++... ....+.+|+.+++.+. ||||+++++++.++...++||||++||+|.+++..
T Consensus 22 G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~ 99 (325)
T 3kn6_A 22 GSFSICRKCVHKKSNQAFAVKIISKR--MEANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVMELLNGGELFERIKK 99 (325)
T ss_dssp ETTEEEEEEEETTTCCEEEEEEEEGG--GHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHH
T ss_pred CCCeEEEEEEECCCCCEEEEEEEChh--hhhhHHHHHHHHHHhcCCCCeeEEEEEEEcCCEEEEEEEccCCCcHHHHHHh
Confidence 89999999988 4677888887543 3467789999999996 99999999999999999999999999999999975
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCC---CeEEccccccccCCCC----CccccCccCC
Q 014478 79 WETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDG---NPRLSSFGLMKNSRDG----KSYSTNLAFT 151 (424)
Q Consensus 79 ~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~---~~kl~Dfg~~~~~~~~----~~~~gt~~y~ 151 (424)
...+++.++..++.|++.||.|||+++ |+||||||+|||++.++ .+||+|||+++..... ....||+.|+
T Consensus 100 --~~~~~~~~~~~i~~qi~~~l~~LH~~~-ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~t~~y~ 176 (325)
T 3kn6_A 100 --KKHFSETEASYIMRKLVSAVSHMHDVG-VVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKTPCFTLHYA 176 (325)
T ss_dssp --CSCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEEEC----CEEEECCCTTCEECCC---------------
T ss_pred --cCCCCHHHHHHHHHHHHHHHHHHHHCC-CeecCCCHHHEEEecCCCcccEEEeccccceecCCCCCcccccCCCcCcc
Confidence 467999999999999999999999999 99999999999997665 7999999999865433 3446799999
Q ss_pred CccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhcccCCC--CC----chhHHHHHHHHHHhc
Q 014478 152 PPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGH--FS----NDEGTELVRLASRCL 225 (424)
Q Consensus 152 aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~----~~~~~~l~~li~~cl 225 (424)
|||++.+..++.++|||||||++|+|++|..||........ ............... .+ ..+++++.+||.+||
T Consensus 177 aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~-~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L 255 (325)
T 3kn6_A 177 APELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLT-CTSAVEIMKKIKKGDFSFEGEAWKNVSQEAKDLIQGLL 255 (325)
T ss_dssp -------CCCCHHHHHHHHHHHHHHHHHSSCTTC--------CCCHHHHHHHHTTTCCCCCSHHHHTSCHHHHHHHHHHH
T ss_pred CHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCccccc-cccHHHHHHHHHcCCCCCCcccccCCCHHHHHHHHHHC
Confidence 99999988999999999999999999999988875321110 001111111111111 11 246789999999999
Q ss_pred ccCcCCCCCHHHHHHH
Q 014478 226 QSEARERPNAKSLVIS 241 (424)
Q Consensus 226 ~~dp~~Rps~~~~~~~ 241 (424)
+.||.+|||+++++++
T Consensus 256 ~~dP~~Rpt~~ell~h 271 (325)
T 3kn6_A 256 TVDPNKRLKMSGLRYN 271 (325)
T ss_dssp CCCTTTCCCTTTSTTC
T ss_pred CCChhHCCCHHHHhcC
Confidence 9999999999998744
|
| >3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.2e-42 Score=319.12 Aligned_cols=233 Identities=15% Similarity=0.240 Sum_probs=197.5
Q ss_pred CCCcccceeee--ecceecccccCCC--chhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHhHhc
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESS--DLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLF 77 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~--~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~ 77 (424)
|++|.||.+.+ .+..+++|++... ....+.+.+|+.+++.++||||+++++++......++||||+++++|.+++.
T Consensus 33 G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~ 112 (303)
T 3a7i_A 33 GSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLE 112 (303)
T ss_dssp CSSSEEEEEEETTTCCEEEEEEEETTTCSTTHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCTTEEHHHHHT
T ss_pred cCCeEEEEEEECCCCcEEEEEEecccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEEeCCCCcHHHHHh
Confidence 89999999987 4667788877543 3346789999999999999999999999999999999999999999999995
Q ss_pred cCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCC----CccccCccCCCc
Q 014478 78 HWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG----KSYSTNLAFTPP 153 (424)
Q Consensus 78 ~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~----~~~~gt~~y~aP 153 (424)
..++++..++.++.|++.||.|||+++ ++||||||+||+++.++.+||+|||++...... ....||+.|+||
T Consensus 113 ---~~~~~~~~~~~~~~qi~~~l~~lH~~~-i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aP 188 (303)
T 3a7i_A 113 ---PGPLDETQIATILREILKGLDYLHSEK-KIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAP 188 (303)
T ss_dssp ---TSCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEECTTSCEEECCCTTCEECBTTBCCBCCCCSCGGGCCH
T ss_pred ---cCCCCHHHHHHHHHHHHHHHHHHHHCC-CccCCCChheEEECCCCCEEEeecccceecCccccccCccCCCcCccCH
Confidence 467999999999999999999999999 999999999999999999999999998765432 345689999999
Q ss_pred cccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHHHHHHHHHhcccCcCCCC
Q 014478 154 EYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERP 233 (424)
Q Consensus 154 E~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rp 233 (424)
|++.+..++.++||||||+++|+|++|..||...... .....+........+..++..+.+++.+||..||.+||
T Consensus 189 E~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rp 263 (303)
T 3a7i_A 189 EVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPM-----KVLFLIPKNNPPTLEGNYSKPLKEFVEACLNKEPSFRP 263 (303)
T ss_dssp HHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHH-----HHHHHHHHSCCCCCCSSCCHHHHHHHHHHCCSSGGGSC
T ss_pred HHHhcCCCCchhhhHHHHHHHHHHccCCCCCCCcCHH-----HHHHHhhcCCCCCCccccCHHHHHHHHHHcCCChhhCc
Confidence 9999888999999999999999999999887653211 11112222233345566788999999999999999999
Q ss_pred CHHHHHHHHH
Q 014478 234 NAKSLVISLM 243 (424)
Q Consensus 234 s~~~~~~~l~ 243 (424)
|+.+++++..
T Consensus 264 s~~~ll~~~~ 273 (303)
T 3a7i_A 264 TAKELLKHKF 273 (303)
T ss_dssp CHHHHTTCHH
T ss_pred CHHHHhhChh
Confidence 9999998654
|
| >3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-42 Score=324.20 Aligned_cols=237 Identities=12% Similarity=0.114 Sum_probs=194.4
Q ss_pred CCCcccceeee--ecceecccccCCCc---hhhhHHHHHHHHHhcC-CCcCcceeEEEEEeCCeeeEEEecCCCCCHHhH
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESSD---LGETLNLEEAKAVGNL-RSERLANLIGCCYEADERLLVAEFMPNETLAKH 75 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~~---~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~ 75 (424)
|+||.||.+.+ .+..+++|++.... .....+.+|+.++..+ .||||+++++++...+..++||||+++|+|.++
T Consensus 40 G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~ 119 (327)
T 3lm5_A 40 GKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEVYENTSEIILILEYAAGGEIFSL 119 (327)
T ss_dssp ETTEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEECCTTEEGGGG
T ss_pred CCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEEEEEEEeCCeEEEEEEecCCCcHHHH
Confidence 89999999987 46778888775433 3356889999999999 569999999999999999999999999999999
Q ss_pred hccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecC---CCCeEEccccccccCCCC---CccccCcc
Q 014478 76 LFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDK---DGNPRLSSFGLMKNSRDG---KSYSTNLA 149 (424)
Q Consensus 76 l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~---~~~~kl~Dfg~~~~~~~~---~~~~gt~~ 149 (424)
+.......+++.+++.++.|++.||.|||+++ |+||||||+|||++. ++.+||+|||+++..... ....||+.
T Consensus 120 ~~~~~~~~~~~~~~~~i~~ql~~~L~~LH~~g-ivH~Dikp~NIl~~~~~~~~~~kL~Dfg~a~~~~~~~~~~~~~gt~~ 198 (327)
T 3lm5_A 120 CLPELAEMVSENDVIRLIKQILEGVYYLHQNN-IVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHACELREIMGTPE 198 (327)
T ss_dssp GSSCC-CCCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCCGGGEEESCBTTBCCEEECCGGGCEEC---------CCCGG
T ss_pred HHHhcccCCCHHHHHHHHHHHHHHHHHHHHCC-eecCcCChHHEEEecCCCCCcEEEeeCccccccCCccccccccCCcC
Confidence 86545578999999999999999999999999 999999999999987 789999999999876543 34568999
Q ss_pred CCCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHHHHHHHHHhcccCc
Q 014478 150 FTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEA 229 (424)
Q Consensus 150 y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp 229 (424)
|+|||++.+..++.++|||||||++|+|++|..||........... ...............+++.+.++|.+||+.||
T Consensus 199 y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~--i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP 276 (327)
T 3lm5_A 199 YLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQETYLN--ISQVNVDYSEETFSSVSQLATDFIQSLLVKNP 276 (327)
T ss_dssp GCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHH--HHHTCCCCCTTTTTTSCHHHHHHHHHHSCSSG
T ss_pred ccCCeeecCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchHHHHH--HHhcccccCchhhcccCHHHHHHHHHHcCCCh
Confidence 9999999988999999999999999999999988876422211111 11111222333345678899999999999999
Q ss_pred CCCCCHHHHHHH
Q 014478 230 RERPNAKSLVIS 241 (424)
Q Consensus 230 ~~Rps~~~~~~~ 241 (424)
++|||+++++++
T Consensus 277 ~~Rpt~~~ll~h 288 (327)
T 3lm5_A 277 EKRPTAEICLSH 288 (327)
T ss_dssp GGSCCHHHHTTC
T ss_pred hhCcCHHHHhCC
Confidence 999999999865
|
| >3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-42 Score=342.22 Aligned_cols=237 Identities=16% Similarity=0.231 Sum_probs=195.8
Q ss_pred CCCcccceeee--ecceecccccCCCc----hhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHhH
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESSD----LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKH 75 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~~----~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~ 75 (424)
|+||.||.+.+ .+..+++|++.... .....+.+|+++|++++||||+++++++......|+||||++||+|.++
T Consensus 196 G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lVmE~~~gg~L~~~ 275 (543)
T 3c4z_A 196 GGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYH 275 (543)
T ss_dssp CSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCTTCBHHHH
T ss_pred CCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeCCEEEEEEEeccCCCHHHH
Confidence 89999999987 46778888875433 2346788999999999999999999999999999999999999999999
Q ss_pred hccCC--CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCC----CccccCcc
Q 014478 76 LFHWE--TQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG----KSYSTNLA 149 (424)
Q Consensus 76 l~~~~--~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~----~~~~gt~~ 149 (424)
+.... ...+++..++.++.||+.||.|||+++ |+||||||+|||++.+|.+||+|||+++..... ....||+.
T Consensus 276 l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH~~g-IvHrDLKP~NILl~~~g~vkL~DFGla~~~~~~~~~~~~~~GT~~ 354 (543)
T 3c4z_A 276 IYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRN-IIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPG 354 (543)
T ss_dssp HHTSSTTSCSCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEECTTSCEEECCCTTCEECCTTCCCBCCCCSCTT
T ss_pred HHHhhcccccccHHHHHHHHHHHHHHHHHHHHcC-CcccCCChHHEEEeCCCCEEEeecceeeeccCCCcccccccCCcc
Confidence 86532 447999999999999999999999999 999999999999999999999999999876543 23479999
Q ss_pred CCCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHHHHHHHHHhcccCc
Q 014478 150 FTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEA 229 (424)
Q Consensus 150 y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp 229 (424)
|+|||++.+..++.++|||||||++|||++|..||...............+... ....|..+++++.++|.+||+.||
T Consensus 355 Y~APE~l~~~~~~~~~DiwSlGvilyelltG~~PF~~~~~~~~~~~~~~~i~~~--~~~~p~~~s~~~~~li~~lL~~dP 432 (543)
T 3c4z_A 355 FMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQ--AVTYPDKFSPASKDFCEALLQKDP 432 (543)
T ss_dssp TSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCTTCCCCHHHHHHHHHHC--CCCCCTTSCHHHHHHHHHHSCSSG
T ss_pred ccChhhhcCCCCChHHhcCcchHHHHHHHhCCCCCCCCccchhHHHHHHHHhhc--ccCCCcccCHHHHHHHHHhccCCH
Confidence 999999998889999999999999999999998887642110011111111111 224566788999999999999999
Q ss_pred CCCCCH-----HHHHHH
Q 014478 230 RERPNA-----KSLVIS 241 (424)
Q Consensus 230 ~~Rps~-----~~~~~~ 241 (424)
++||++ ++++.+
T Consensus 433 ~~R~~~~~~~a~ei~~H 449 (543)
T 3c4z_A 433 EKRLGFRDGSCDGLRTH 449 (543)
T ss_dssp GGSCCCBTTBSHHHHTS
T ss_pred hHCCCCcccCHHHHHcC
Confidence 999965 666654
|
| >3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.3e-42 Score=315.47 Aligned_cols=230 Identities=17% Similarity=0.201 Sum_probs=190.4
Q ss_pred CCCcccceeeeec--ceecccccCCC-chhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHhHhcc
Q 014478 2 GGRCSKFSICWFH--CHLKSSVLESS-DLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFH 78 (424)
Q Consensus 2 G~~g~v~~~~~~~--~~v~~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~ 78 (424)
|++|.||.+.+.+ ..+++|++... ....+.+.+|++++++++||||+++++++.++...++||||+++++|.+++..
T Consensus 20 G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~ 99 (277)
T 3f3z_A 20 GSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVMELCTGGELFERVVH 99 (277)
T ss_dssp ETTEEEEEEEETTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEECCCSCBHHHHHHH
T ss_pred cCCEEEEEEEeCCCCcEEEEEeehhhccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCeEEEEEeccCCCcHHHHHHH
Confidence 8999999998844 45666666443 23467899999999999999999999999999999999999999999998865
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeee---cCCCCeEEccccccccCCCC---CccccCccCCC
Q 014478 79 WETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILF---DKDGNPRLSSFGLMKNSRDG---KSYSTNLAFTP 152 (424)
Q Consensus 79 ~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill---~~~~~~kl~Dfg~~~~~~~~---~~~~gt~~y~a 152 (424)
...+++.+++.++.|++.||.|||+++ ++||||||+||++ +.++.+||+|||++...... ....||+.|+|
T Consensus 100 --~~~~~~~~~~~i~~~i~~~l~~lH~~~-i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~~~~~~~~~~~~~~t~~y~a 176 (277)
T 3f3z_A 100 --KRVFRESDAARIMKDVLSAVAYCHKLN-VAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTKVGTPYYVS 176 (277)
T ss_dssp --HCSCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEESSSSTTCCEEECCCTTCEECCTTSCBCCCCSCTTTCC
T ss_pred --cCCCCHHHHHHHHHHHHHHHHHHHHCC-ccCCCCCHHHEEEecCCCCCcEEEEecccceeccCccchhccCCCCCccC
Confidence 456999999999999999999999999 9999999999999 77889999999999865543 34568999999
Q ss_pred ccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhcccCCCCCc----hhHHHHHHHHHHhcccC
Q 014478 153 PEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSN----DEGTELVRLASRCLQSE 228 (424)
Q Consensus 153 PE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~l~~li~~cl~~d 228 (424)
||.+.+ .++.++||||||+++|+|++|..||........ ......... ..+. .+++++.++|.+||+.|
T Consensus 177 PE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~----~~~~~~~~~--~~~~~~~~~~~~~~~~li~~~l~~d 249 (277)
T 3f3z_A 177 PQVLEG-LYGPECDEWSAGVMMYVLLCGYPPFSAPTDSEV----MLKIREGTF--TFPEKDWLNVSPQAESLIRRLLTKS 249 (277)
T ss_dssp HHHHTT-CBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHH----HHHHHHCCC--CCCHHHHTTSCHHHHHHHHHHTCSS
T ss_pred hHHhcc-cCCchhhehhHHHHHHHHHHCCCCCCCCCHHHH----HHHHHhCCC--CCCchhhhcCCHHHHHHHHHHccCC
Confidence 999874 589999999999999999999988876422211 111111111 1222 45789999999999999
Q ss_pred cCCCCCHHHHHHH
Q 014478 229 ARERPNAKSLVIS 241 (424)
Q Consensus 229 p~~Rps~~~~~~~ 241 (424)
|++|||+.+++++
T Consensus 250 p~~R~s~~~~l~h 262 (277)
T 3f3z_A 250 PKQRITSLQALEH 262 (277)
T ss_dssp TTTSCCHHHHTTS
T ss_pred hhhCcCHHHHhcC
Confidence 9999999999975
|
| >2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-42 Score=329.00 Aligned_cols=227 Identities=20% Similarity=0.217 Sum_probs=182.1
Q ss_pred CCCcccceeee--ecceecccccCCCc----hhhhHHHHHHHH-HhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHh
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESSD----LGETLNLEEAKA-VGNLRSERLANLIGCCYEADERLLVAEFMPNETLAK 74 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~~----~~~~~~~~E~~~-l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~ 74 (424)
|+||.||.+.+ .+..+++|++.... .....+..|..+ ++.++||||+++++++.+.+..|+||||++||+|.+
T Consensus 49 G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~~~~lv~E~~~gg~L~~ 128 (373)
T 2r5t_A 49 GSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYINGGELFY 128 (373)
T ss_dssp CTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEECSSEEEEEEECCCSCBHHH
T ss_pred CCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCCEEEEEEeCCCCCcHHH
Confidence 89999999988 45567777775433 234456677776 567899999999999999999999999999999999
Q ss_pred HhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCC----CCCccccCccC
Q 014478 75 HLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSR----DGKSYSTNLAF 150 (424)
Q Consensus 75 ~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~----~~~~~~gt~~y 150 (424)
++.. ...+++..+..++.||+.||.|||+++ |+||||||+|||++.+|.+||+|||+++... ......||+.|
T Consensus 129 ~l~~--~~~~~~~~~~~~~~qi~~aL~~LH~~g-ivHrDlkp~NIll~~~g~ikL~DFG~a~~~~~~~~~~~~~~gt~~y 205 (373)
T 2r5t_A 129 HLQR--ERCFLEPRARFYAAEIASALGYLHSLN-IVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNSTTSTFCGTPEY 205 (373)
T ss_dssp HHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEECTTSCEEECCCCBCGGGBCCCCCCCSBSCCCCC
T ss_pred HHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC-ceecCCCHHHEEECCCCCEEEeeCccccccccCCCccccccCCccc
Confidence 9965 457899999999999999999999999 9999999999999999999999999998632 22456799999
Q ss_pred CCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHHHHHHHHHhcccCcC
Q 014478 151 TPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEAR 230 (424)
Q Consensus 151 ~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~ 230 (424)
+|||++.+..++.++|||||||++|||++|..||........ ...+... ....+..++.++.++|.+||+.||.
T Consensus 206 ~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~----~~~i~~~--~~~~~~~~~~~~~~li~~lL~~dp~ 279 (373)
T 2r5t_A 206 LAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEM----YDNILNK--PLQLKPNITNSARHLLEGLLQKDRT 279 (373)
T ss_dssp CCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSBHHHH----HHHHHHS--CCCCCSSSCHHHHHHHHHHTCSSGG
T ss_pred cCHHHhCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHHHH----HHHHHhc--ccCCCCCCCHHHHHHHHHHcccCHH
Confidence 999999988999999999999999999999998876532221 1112222 2234566788999999999999999
Q ss_pred CCCCHHH
Q 014478 231 ERPNAKS 237 (424)
Q Consensus 231 ~Rps~~~ 237 (424)
+||++.+
T Consensus 280 ~R~~~~~ 286 (373)
T 2r5t_A 280 KRLGAKD 286 (373)
T ss_dssp GSTTTTT
T ss_pred hCCCCCC
Confidence 9999853
|
| >2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-42 Score=329.85 Aligned_cols=243 Identities=14% Similarity=0.079 Sum_probs=194.6
Q ss_pred CCCcccceeeee----------cceecccccCCCchhhhHHHHHHHHHhcCCCcCcce---------------eEEEEEe
Q 014478 2 GGRCSKFSICWF----------HCHLKSSVLESSDLGETLNLEEAKAVGNLRSERLAN---------------LIGCCYE 56 (424)
Q Consensus 2 G~~g~v~~~~~~----------~~~v~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~---------------~~~~~~~ 56 (424)
|++|.||.+.+. +..+++|++... +.+.+|++++++++||||++ +++++..
T Consensus 53 G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~----~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~i~~~~~~~~~ 128 (352)
T 2jii_A 53 DNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD----GRLFNEQNFFQRAAKPLQVNKWKKLYSTPLLAIPTCMGFGVH 128 (352)
T ss_dssp ETTEEEEEEEECC-----------CEEEEEEETT----STHHHHHHHHHHHCCHHHHHHHHHHTTCTTCSCCCCCEEEEE
T ss_pred CCCeEEEEEeecCCccccccccCceEEEEEeccc----chHHHHHHHHHHhcccchhhhhhhhccCCccCccchhhcccc
Confidence 899999999884 466777776543 46889999999999999887 6788877
Q ss_pred -CCeeeEEEecCCCCCHHhHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCC--CeEEcccc
Q 014478 57 -ADERLLVAEFMPNETLAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDG--NPRLSSFG 133 (424)
Q Consensus 57 -~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~--~~kl~Dfg 133 (424)
+...++||||+ +++|.+++.......+++.+++.++.||+.||.|||+++ |+||||||+|||++.++ .+||+|||
T Consensus 129 ~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~-ivH~Dikp~NIl~~~~~~~~~kl~Dfg 206 (352)
T 2jii_A 129 QDKYRFLVLPSL-GRSLQSALDVSPKHVLSERSVLQVACRLLDALEFLHENE-YVHGNVTAENIFVDPEDQSQVTLAGYG 206 (352)
T ss_dssp TTTEEEEEEECC-CEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHTT-CBCSCCCGGGEEEETTEEEEEEECCGG
T ss_pred CCcEEEEEecCC-CcCHHHHHHhCCcCCCCHHHHHHHHHHHHHHHHHHHhCC-ccCCCCCHHHEEEcCCCCceEEEecCc
Confidence 67789999999 999999997643468999999999999999999999999 99999999999999998 89999999
Q ss_pred ccccCCCC-----------CccccCccCCCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhh
Q 014478 134 LMKNSRDG-----------KSYSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMD 202 (424)
Q Consensus 134 ~~~~~~~~-----------~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~ 202 (424)
+++..... ....||+.|+|||++.+..++.++|||||||++|+|++|..||..................
T Consensus 207 ~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~ 286 (352)
T 2jii_A 207 FAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKGCGPSRRSDLQSLGYCMLKWLYGFLPWTNCLPNTEDIMKQKQKFV 286 (352)
T ss_dssp GCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTTCHHHHHHHHHHHH
T ss_pred ceeeccCCCccccccccccccccCCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCcccCCcCHHHHHHHHHhcc
Confidence 99765421 2346899999999999888999999999999999999999888754211111111111011
Q ss_pred cccC---C--CCCchhHHHHHHHHHHhcccCcCCCCCHHHHHHHHHHHhhhhh
Q 014478 203 SALE---G--HFSNDEGTELVRLASRCLQSEARERPNAKSLVISLMSLQKEAE 250 (424)
Q Consensus 203 ~~~~---~--~~~~~~~~~l~~li~~cl~~dp~~Rps~~~~~~~l~~~~~~~~ 250 (424)
.... . .....+++++.+++.+||..||++|||++++++.|+.+.....
T Consensus 287 ~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~~~~ 339 (352)
T 2jii_A 287 DKPGPFVGPCGHWIRPSETLQKYLKVVMALTYEEKPPYAMLRNNLEALLQDLR 339 (352)
T ss_dssp HSCCCEECTTSCEECCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHTT
T ss_pred CChhhhhhhccccCCCcHHHHHHHHHHHhCChhhCCCHHHHHHHHHHHHHhcC
Confidence 1100 0 0112457899999999999999999999999999999887644
|
| >3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-42 Score=326.20 Aligned_cols=243 Identities=18% Similarity=0.215 Sum_probs=186.3
Q ss_pred CCCcccceeeeecceecccccCCCchhhhHHHHHHHHHhcCCCcCcceeEEEEEe-----CCeeeEEEecCCCCCHHhHh
Q 014478 2 GGRCSKFSICWFHCHLKSSVLESSDLGETLNLEEAKAVGNLRSERLANLIGCCYE-----ADERLLVAEFMPNETLAKHL 76 (424)
Q Consensus 2 G~~g~v~~~~~~~~~v~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-----~~~~~lv~e~~~~gsL~~~l 76 (424)
|+||.||++.+.+..|++|++............|+..+..++||||+++++.+.. ....++||||+++|+|.+++
T Consensus 24 G~~g~Vy~~~~~~~~vavK~~~~~~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l 103 (336)
T 3g2f_A 24 GRYGAVYKGSLDERPVAVKVFSFANRQNFINEKNIYRVPLMEHDNIARFIVGDERVTADGRMEYLLVMEYYPNGSLXKYL 103 (336)
T ss_dssp CSSEEEEEEEETTEEEEEEEEEGGGHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSCEEEEEEECCCTTCBHHHHH
T ss_pred CCCeEEEEEEECCeEEEEEEeeccchhhHHHHHHHHHHHhccCcchhhheecccccccCCCceEEEEEecCCCCcHHHHH
Confidence 8999999999999999999886554332233334444556899999999987643 22468999999999999999
Q ss_pred ccCCCCCCCHHHHHHHHHHHHHHHHHHHhC---------CCcccccCCCCCeeecCCCCeEEccccccccCCCC------
Q 014478 77 FHWETQPMKWAMRLRVALYLAQALEYCSSK---------GRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG------ 141 (424)
Q Consensus 77 ~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~---------~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~------ 141 (424)
.. ...++..++.++.||+.||.|||++ + |+||||||+|||++.++.+||+|||+++.....
T Consensus 104 ~~---~~~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~-ivH~Dikp~Nill~~~~~~kL~DFG~a~~~~~~~~~~~~ 179 (336)
T 3g2f_A 104 SL---HTSDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPA-ISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPG 179 (336)
T ss_dssp HH---CCBCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCC-EECSSCSGGGEEECTTSCEEECCCTTCEECSSSSCC---
T ss_pred hh---cccchhHHHHHHHHHHHHHHHHHhhhccccccccc-eeecccccceEEEcCCCcEEEeeccceeecccccccCcc
Confidence 54 4568999999999999999999999 9 999999999999999999999999999765421
Q ss_pred ------CccccCccCCCcccccc-------CCCCCCcceehhHHHHHHHhhCCCCCCchhh-HH--------Hhh----h
Q 014478 142 ------KSYSTNLAFTPPEYMRT-------GRVTPESVVYSFGTMLLDLLSGKHIPPSHAL-DL--------IRS----K 195 (424)
Q Consensus 142 ------~~~~gt~~y~aPE~~~~-------~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~-~~--------~~~----~ 195 (424)
....||+.|+|||++.+ ..++.++|||||||++|||++|..|+..... .. ... .
T Consensus 180 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (336)
T 3g2f_A 180 EEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGESVPEYQMAFQTEVGNHPTFE 259 (336)
T ss_dssp ------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGGSTTSCCCCCCCTTHHHHCSSCCHH
T ss_pred ccccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhcCCcCCCccchhHHHHhhhcccCCCchHH
Confidence 13468999999999986 3567799999999999999999765433210 00 000 0
Q ss_pred hhhH-hhhcccCCCCC------chhHHHHHHHHHHhcccCcCCCCCHHHHHHHHHHHhhh
Q 014478 196 NFLL-LMDSALEGHFS------NDEGTELVRLASRCLQSEARERPNAKSLVISLMSLQKE 248 (424)
Q Consensus 196 ~~~~-~~~~~~~~~~~------~~~~~~l~~li~~cl~~dp~~Rps~~~~~~~l~~~~~~ 248 (424)
.... ..........+ ..+++++.+||.+||+.||++|||+.++++.|+.+...
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~e~l~~L~~ll~~ 319 (336)
T 3g2f_A 260 DMQVLVSREKQRPKFPEAWKENSLAVRSLKETIEDCWDQDAEARLTAQXAEERMAELMMI 319 (336)
T ss_dssp HHHHHHTTSCCCCCCCTTCCCCSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred HHHhhhcccccCCCCCcccccccchHHHHHHHHHHHhcCChhhCcchHHHHHHHHHHHHH
Confidence 0000 11111112222 23677899999999999999999999999999998864
|
| >3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-42 Score=327.55 Aligned_cols=235 Identities=18% Similarity=0.124 Sum_probs=186.7
Q ss_pred CCCcccceeee--ecceecccccCCC------chhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHH
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESS------DLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLA 73 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~------~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~ 73 (424)
|++|.||.+.+ .+..+++|++... ....+.+.+|++++++++||||+++++++.+.+..++||||++||+|.
T Consensus 37 G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~ 116 (345)
T 3hko_A 37 GSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYEDEQYICLVMELCHGGHLL 116 (345)
T ss_dssp CSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEECCCSCBHH
T ss_pred cCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhccCCeEEEEEeCCCCCcHH
Confidence 89999999987 4456777766432 334578999999999999999999999999999999999999999999
Q ss_pred hHhccC--------------------------------------CCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCC
Q 014478 74 KHLFHW--------------------------------------ETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLN 115 (424)
Q Consensus 74 ~~l~~~--------------------------------------~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dik 115 (424)
+++... ....+++..++.++.||+.||.|||+++ |+|||||
T Consensus 117 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~-ivH~Dlk 195 (345)
T 3hko_A 117 DKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLHNQG-ICHRDIK 195 (345)
T ss_dssp HHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHHHHHHHHHHHTT-EECCCCC
T ss_pred HHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHCC-ccccCCC
Confidence 998420 0112457788999999999999999999 9999999
Q ss_pred CCCeeecCCC--CeEEccccccccCCC--------CCccccCccCCCcccccc--CCCCCCcceehhHHHHHHHhhCCCC
Q 014478 116 AYRILFDKDG--NPRLSSFGLMKNSRD--------GKSYSTNLAFTPPEYMRT--GRVTPESVVYSFGTMLLDLLSGKHI 183 (424)
Q Consensus 116 p~Nill~~~~--~~kl~Dfg~~~~~~~--------~~~~~gt~~y~aPE~~~~--~~~~~~~Dv~slG~~l~el~~g~~~ 183 (424)
|+|||++.++ .+||+|||+++.... .....||+.|+|||.+.+ ..++.++|||||||++|+|++|..|
T Consensus 196 p~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~p 275 (345)
T 3hko_A 196 PENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWSAGVLLHLLLMGAVP 275 (345)
T ss_dssp GGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHTCSSSCCCTHHHHHHHHHHHHHHHHSSCS
T ss_pred hhhEEEecCCCceEEEeeccccccccccCccccccccccCCCccccCchhhccCCCCCCcHHHHHHHHHHHHHHHHCCCC
Confidence 9999998776 899999999875432 134568999999999975 5689999999999999999999998
Q ss_pred CCchhhHHHhhhhhhHhhhcccCCC--CCchhHHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 014478 184 PPSHALDLIRSKNFLLLMDSALEGH--FSNDEGTELVRLASRCLQSEARERPNAKSLVIS 241 (424)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~li~~cl~~dp~~Rps~~~~~~~ 241 (424)
|........ ............ ....+++++.++|.+||+.||.+|||+.+++++
T Consensus 276 f~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~h 331 (345)
T 3hko_A 276 FPGVNDADT----ISQVLNKKLCFENPNYNVLSPLARDLLSNLLNRNVDERFDAMRALQH 331 (345)
T ss_dssp SCCSSHHHH----HHHHHHCCCCTTSGGGGGSCHHHHHHHHHHSCSCTTTSCCHHHHHHS
T ss_pred CCCCChHHH----HHHHHhcccccCCcccccCCHHHHHHHHHHcCCChhHCCCHHHHhcC
Confidence 876422211 122222222111 122467899999999999999999999999975
|
| >2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-42 Score=323.58 Aligned_cols=235 Identities=13% Similarity=0.174 Sum_probs=190.5
Q ss_pred CCCcccceeee--ecceecccccCCCchhhhHHHHHHHHHhcC-CCcCcceeEEEEEe------CCeeeEEEecCCCCCH
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESSDLGETLNLEEAKAVGNL-RSERLANLIGCCYE------ADERLLVAEFMPNETL 72 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~------~~~~~lv~e~~~~gsL 72 (424)
|++|.||.+.+ .+..+++|++.........+.+|+.+++++ +||||+++++++.. ....++||||+++|+|
T Consensus 35 G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L 114 (326)
T 2x7f_A 35 GTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSV 114 (326)
T ss_dssp ETTEEEEEEEETTTCCEEEEEEEECCSSTTHHHHHHHHHHHHHCCSTTBCCEEEEEEECC--CCCCEEEEEEECCTTEEH
T ss_pred CCCEEEEEEEECCCCCeEEEEEEecCcccHHHHHHHHHHHHhccCCCCeeeeeeEEeeccCccccceEEEEEEcCCCCcH
Confidence 78999999998 677888888876666678899999999999 89999999999987 4578999999999999
Q ss_pred HhHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCC----CccccCc
Q 014478 73 AKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG----KSYSTNL 148 (424)
Q Consensus 73 ~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~----~~~~gt~ 148 (424)
.+++.......+++..++.++.||+.||.|||+++ ++||||||+||+++.++.+||+|||++...... ....||+
T Consensus 115 ~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~-ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~ 193 (326)
T 2x7f_A 115 TDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHK-VIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRRNTFIGTP 193 (326)
T ss_dssp HHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCSGGGEEECTTCCEEECCCTTTC-------------CCG
T ss_pred HHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHCC-ccccCCcHHHEEEcCCCCEEEeeCcCceecCcCccccccccCCc
Confidence 99997644567999999999999999999999999 999999999999999999999999998765432 3456899
Q ss_pred cCCCccccc-----cCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHHHHHHHHH
Q 014478 149 AFTPPEYMR-----TGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASR 223 (424)
Q Consensus 149 ~y~aPE~~~-----~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 223 (424)
.|+|||++. +..++.++|||||||++|+|++|..||...... ...............+..++..+.++|.+
T Consensus 194 ~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 269 (326)
T 2x7f_A 194 YWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPM----RALFLIPRNPAPRLKSKKWSKKFQSFIES 269 (326)
T ss_dssp GGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTTTTSCHH----HHHHHHHHSCCCCCSCSCSCHHHHHHHHH
T ss_pred cccChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCCCCcHH----HHHHHhhcCccccCCccccCHHHHHHHHH
Confidence 999999987 456899999999999999999999887653211 11111122222223345568899999999
Q ss_pred hcccCcCCCCCHHHHHHH
Q 014478 224 CLQSEARERPNAKSLVIS 241 (424)
Q Consensus 224 cl~~dp~~Rps~~~~~~~ 241 (424)
||..||.+|||+.+++++
T Consensus 270 ~l~~dp~~Rps~~~ll~h 287 (326)
T 2x7f_A 270 CLVKNHSQRPATEQLMKH 287 (326)
T ss_dssp HCCSSGGGSCCHHHHHTS
T ss_pred HhccChhhCCCHHHHhhC
Confidence 999999999999999875
|
| >3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-42 Score=326.43 Aligned_cols=234 Identities=18% Similarity=0.237 Sum_probs=190.1
Q ss_pred CCCcccceeee-ecceecccccCCC---chhhhHHHHHHHHHhcCCC--cCcceeEEEEEeCCeeeEEEecCCCCCHHhH
Q 014478 2 GGRCSKFSICW-FHCHLKSSVLESS---DLGETLNLEEAKAVGNLRS--ERLANLIGCCYEADERLLVAEFMPNETLAKH 75 (424)
Q Consensus 2 G~~g~v~~~~~-~~~~v~~~~~~~~---~~~~~~~~~E~~~l~~l~h--~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~ 75 (424)
|+||.||.+.. .+..+++|++... ....+.+.+|+.+|..++| |||+++++++..+...++||| +.+|+|.++
T Consensus 20 G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~e-~~~~~L~~~ 98 (343)
T 3dbq_A 20 GGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME-CGNIDLNSW 98 (343)
T ss_dssp CSSEEEEEEECTTSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEC-CCSEEHHHH
T ss_pred CCCeEEEEEEeCCCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCCEEEEEEe-CCCCCHHHH
Confidence 89999999977 4566787876533 2345778999999999976 999999999999999999999 557899999
Q ss_pred hccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCC------CccccCcc
Q 014478 76 LFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG------KSYSTNLA 149 (424)
Q Consensus 76 l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~------~~~~gt~~ 149 (424)
+.. ...+++.++..++.||+.||.|||+++ |+||||||+|||++ ++.+||+|||+++..... ....||+.
T Consensus 99 l~~--~~~~~~~~~~~i~~qi~~al~~lH~~~-iiHrDikp~NIll~-~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~ 174 (343)
T 3dbq_A 99 LKK--KKSIDPWERKSYWKNMLEAVHTIHQHG-IVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTTSVVKDSQVGTVN 174 (343)
T ss_dssp HHH--SCCCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEEE-TTEEEECCCSSSCCC------------CCCCS
T ss_pred HHh--cCCCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCCcceEEEE-CCcEEEeecccccccCcccccccCCCCcCCcC
Confidence 975 567999999999999999999999999 99999999999997 678999999999876432 24568999
Q ss_pred CCCcccccc-----------CCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHHHH
Q 014478 150 FTPPEYMRT-----------GRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELV 218 (424)
Q Consensus 150 y~aPE~~~~-----------~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 218 (424)
|+|||++.+ ..++.++|||||||++|+|++|..||...... ................+...+.++.
T Consensus 175 y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~l~ 251 (343)
T 3dbq_A 175 YMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQ---ISKLHAIIDPNHEIEFPDIPEKDLQ 251 (343)
T ss_dssp SCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTTCCSH---HHHHHHHHCTTSCCCCCCCSCHHHH
T ss_pred cCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchhhhhH---HHHHHHHhcCCcccCCcccCCHHHH
Confidence 999999865 56888999999999999999999888653111 1122233344444456666778999
Q ss_pred HHHHHhcccCcCCCCCHHHHHHHHH
Q 014478 219 RLASRCLQSEARERPNAKSLVISLM 243 (424)
Q Consensus 219 ~li~~cl~~dp~~Rps~~~~~~~l~ 243 (424)
+++.+||+.||.+|||+.+++++..
T Consensus 252 ~li~~~L~~dp~~Rpt~~e~l~hp~ 276 (343)
T 3dbq_A 252 DVLKCCLKRDPKQRISIPELLAHPY 276 (343)
T ss_dssp HHHHHHTCSSTTTSCCHHHHHTSHH
T ss_pred HHHHHHcCCChhHCCCHHHHHhCcc
Confidence 9999999999999999999998754
|
| >1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-42 Score=318.61 Aligned_cols=239 Identities=18% Similarity=0.219 Sum_probs=190.7
Q ss_pred CCCcccceeeeec---c--eecccccCCC----chhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCH
Q 014478 2 GGRCSKFSICWFH---C--HLKSSVLESS----DLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETL 72 (424)
Q Consensus 2 G~~g~v~~~~~~~---~--~v~~~~~~~~----~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL 72 (424)
|++|.||.+.+.. . .+++|++... ....+.+.+|++++++++||||+++++++.... .++||||+++|+|
T Consensus 29 G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~~~v~e~~~~~~L 107 (291)
T 1u46_A 29 GSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPP-MKMVTELAPLGSL 107 (291)
T ss_dssp ---CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS-CEEEEECCTTCBH
T ss_pred CCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEccCC-ceeeEecccCCCH
Confidence 8999999998743 1 3677776543 234678899999999999999999999998765 8899999999999
Q ss_pred HhHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCCC-------ccc
Q 014478 73 AKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGK-------SYS 145 (424)
Q Consensus 73 ~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~~-------~~~ 145 (424)
.+++.. ....+++.+++.++.|++.||.|||+++ ++||||||+||+++.++.+||+|||+++...... ...
T Consensus 108 ~~~l~~-~~~~~~~~~~~~~~~~i~~~l~~lH~~~-i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~ 185 (291)
T 1u46_A 108 LDRLRK-HQGHFLLGTLSRYAVQVAEGMGYLESKR-FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRK 185 (291)
T ss_dssp HHHHHH-HGGGSCHHHHHHHHHHHHHHHHHHHHTT-EECSCCCGGGEEEEETTEEEECCCTTCEECCC-CCEEEC-----
T ss_pred HHHHHh-ccCCcCHHHHHHHHHHHHHHHHHHHhCC-cccCCCchheEEEcCCCCEEEccccccccccccccchhhhccCC
Confidence 999965 2356899999999999999999999999 9999999999999999999999999988765332 234
Q ss_pred cCccCCCccccccCCCCCCcceehhHHHHHHHhh-CCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHHHHHHHHHh
Q 014478 146 TNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRC 224 (424)
Q Consensus 146 gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c 224 (424)
+|..|+|||++.+..++.++||||||+++|+|++ |..||....... ..............+..++.++.+++.+|
T Consensus 186 ~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~l~~li~~~ 261 (291)
T 1u46_A 186 VPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQ----ILHKIDKEGERLPRPEDCPQDIYNVMVQC 261 (291)
T ss_dssp CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHHH----HHHHHHTSCCCCCCCTTCCHHHHHHHHHH
T ss_pred CCceeeCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCcccCCHHH----HHHHHHccCCCCCCCcCcCHHHHHHHHHH
Confidence 6778999999998889999999999999999999 888876542211 11122222233344567788999999999
Q ss_pred cccCcCCCCCHHHHHHHHHHHhh
Q 014478 225 LQSEARERPNAKSLVISLMSLQK 247 (424)
Q Consensus 225 l~~dp~~Rps~~~~~~~l~~~~~ 247 (424)
|..||++|||+.++++.|+.+..
T Consensus 262 l~~~p~~Rps~~~l~~~l~~~~~ 284 (291)
T 1u46_A 262 WAHKPEDRPTFVALRDFLLEAQP 284 (291)
T ss_dssp TCSSGGGSCCHHHHHHHHHHHC-
T ss_pred ccCCcccCcCHHHHHHHHHHhCc
Confidence 99999999999999999988764
|
| >3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.8e-42 Score=315.31 Aligned_cols=232 Identities=16% Similarity=0.184 Sum_probs=174.4
Q ss_pred CCCcccceeee--ecceecccccCCCch----hhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHhH
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESSDL----GETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKH 75 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~~~----~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~ 75 (424)
|++|.||.+.+ .+..+++|++..... ..+.+.+|++++++++||||+++++++...+..++||||+++++|.++
T Consensus 22 G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~ 101 (278)
T 3cok_A 22 GSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSNYVYLVLEMCHNGEMNRY 101 (278)
T ss_dssp CSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEECSSEEEEEEECCTTEEHHHH
T ss_pred CCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEccCCeEEEEEecCCCCcHHHH
Confidence 89999999987 567788887754321 246788999999999999999999999999999999999999999999
Q ss_pred hccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCC----CccccCccCC
Q 014478 76 LFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG----KSYSTNLAFT 151 (424)
Q Consensus 76 l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~----~~~~gt~~y~ 151 (424)
+.. ...++++.+++.++.|++.||.|||+++ ++||||||+||+++.++.+||+|||++...... ....||+.|+
T Consensus 102 l~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~~-i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~ 179 (278)
T 3cok_A 102 LKN-RVKPFSENEARHFMHQIITGMLYLHSHG-ILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYTLCGTPNYI 179 (278)
T ss_dssp HHT-CSSCCCHHHHHHHHHHHHHHHHHHHHTT-EECSSCCGGGEEECTTCCEEECCCTTCEECC----------------
T ss_pred Hhh-ccCCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCCHHHEEEcCCCCEEEEeecceeeccCCCCcceeccCCCCcC
Confidence 965 3467999999999999999999999999 999999999999999999999999998865432 2356899999
Q ss_pred CccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHHHHHHHHHhcccCcCC
Q 014478 152 PPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARE 231 (424)
Q Consensus 152 aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~ 231 (424)
|||.+.+..++.++||||||+++|+|++|..||........ ...... .....+..++.++.++|.+||+.||++
T Consensus 180 aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~----~~~~~~--~~~~~~~~~~~~~~~li~~~l~~dp~~ 253 (278)
T 3cok_A 180 SPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNT----LNKVVL--ADYEMPSFLSIEAKDLIHQLLRRNPAD 253 (278)
T ss_dssp ------------CTHHHHHHHHHHHHHHSSCSSCCCSCC---------CCS--SCCCCCTTSCHHHHHHHHHHSCSSGGG
T ss_pred CcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCChhHHHH----HHHHhh--cccCCccccCHHHHHHHHHHcccCHhh
Confidence 99999988899999999999999999999988765321111 111111 112345567889999999999999999
Q ss_pred CCCHHHHHHH
Q 014478 232 RPNAKSLVIS 241 (424)
Q Consensus 232 Rps~~~~~~~ 241 (424)
|||+++++++
T Consensus 254 Rps~~~~l~h 263 (278)
T 3cok_A 254 RLSLSSVLDH 263 (278)
T ss_dssp SCCHHHHTTS
T ss_pred CCCHHHHhcC
Confidence 9999999864
|
| >2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.7e-42 Score=330.31 Aligned_cols=234 Identities=18% Similarity=0.239 Sum_probs=190.3
Q ss_pred CCCcccceeee-ecceecccccCCC---chhhhHHHHHHHHHhcCC--CcCcceeEEEEEeCCeeeEEEecCCCCCHHhH
Q 014478 2 GGRCSKFSICW-FHCHLKSSVLESS---DLGETLNLEEAKAVGNLR--SERLANLIGCCYEADERLLVAEFMPNETLAKH 75 (424)
Q Consensus 2 G~~g~v~~~~~-~~~~v~~~~~~~~---~~~~~~~~~E~~~l~~l~--h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~ 75 (424)
|+||.||.+.. .+..+++|++... ....+.+.+|+.+|+.++ ||||+++++++...+..+|||| +.+++|.++
T Consensus 67 G~fg~Vy~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~E-~~~~~L~~~ 145 (390)
T 2zmd_A 67 GGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME-CGNIDLNSW 145 (390)
T ss_dssp CSSEEEEEEECTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEE-CCSEEHHHH
T ss_pred CCCeEEEEEEcCCCCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCCEEEEEEe-cCCCCHHHH
Confidence 89999999877 4566788877433 334578899999999996 5999999999999999999999 568899999
Q ss_pred hccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCC------CccccCcc
Q 014478 76 LFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG------KSYSTNLA 149 (424)
Q Consensus 76 l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~------~~~~gt~~ 149 (424)
+.. ...+++.+++.++.||+.||.|||+++ |+||||||+|||++ ++.+||+|||+++..... ....||+.
T Consensus 146 l~~--~~~~~~~~~~~i~~qi~~aL~~lH~~~-ivHrDlkp~NIll~-~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~ 221 (390)
T 2zmd_A 146 LKK--KKSIDPWERKSYWKNMLEAVHTIHQHG-IVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTTSVVKDSQVGAVN 221 (390)
T ss_dssp HHH--CSSCCHHHHHHHHHHHHHHHHHHHTTT-CCCCCCCGGGEEES-SSCEEECCCSSSCCC---------CCSCCCGG
T ss_pred HHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC-eeecCCCHHHEEEE-CCeEEEEecCccccccCCCccccCCCCCcCCC
Confidence 975 457899999999999999999999999 99999999999995 689999999999876432 24568999
Q ss_pred CCCcccccc-----------CCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHHHH
Q 014478 150 FTPPEYMRT-----------GRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELV 218 (424)
Q Consensus 150 y~aPE~~~~-----------~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 218 (424)
|+|||++.+ ..++.++|||||||++|||++|..||...... ................+...+.++.
T Consensus 222 y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (390)
T 2zmd_A 222 YMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQ---ISKLHAIIDPNHEIEFPDIPEKDLQ 298 (390)
T ss_dssp GCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTTCCCH---HHHHHHHHCTTSCCCCCCCSCHHHH
T ss_pred ccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchhhhHH---HHHHHHHhCccccCCCCccchHHHH
Confidence 999999875 36888999999999999999999888653111 1122233333444445555678999
Q ss_pred HHHHHhcccCcCCCCCHHHHHHHHH
Q 014478 219 RLASRCLQSEARERPNAKSLVISLM 243 (424)
Q Consensus 219 ~li~~cl~~dp~~Rps~~~~~~~l~ 243 (424)
+||.+||..||.+|||+.+++++..
T Consensus 299 ~li~~~L~~dP~~Rps~~ell~hp~ 323 (390)
T 2zmd_A 299 DVLKCCLKRDPKQRISIPELLAHPY 323 (390)
T ss_dssp HHHHHHTCSSTTTSCCHHHHHTSHH
T ss_pred HHHHHHcccChhhCCCHHHHhhCcC
Confidence 9999999999999999999997644
|
| >2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=9.2e-42 Score=314.47 Aligned_cols=232 Identities=17% Similarity=0.195 Sum_probs=194.7
Q ss_pred CCCcccceeeee--cceecccccCCCc----hhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHhH
Q 014478 2 GGRCSKFSICWF--HCHLKSSVLESSD----LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKH 75 (424)
Q Consensus 2 G~~g~v~~~~~~--~~~v~~~~~~~~~----~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~ 75 (424)
|++|.||.+.+. +..+++|++.... .....+.+|+++++.++||||+++++++.+.+..++||||+++|+|.++
T Consensus 25 G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~ 104 (284)
T 2vgo_A 25 GKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKE 104 (284)
T ss_dssp CSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECCCTTEEHHHH
T ss_pred CCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEcCCEEEEEEEeCCCCcHHHH
Confidence 899999999884 4557777764332 2246788999999999999999999999999999999999999999999
Q ss_pred hccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCC--CccccCccCCCc
Q 014478 76 LFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG--KSYSTNLAFTPP 153 (424)
Q Consensus 76 l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~--~~~~gt~~y~aP 153 (424)
+.. ...+++..++.++.|++.||.|||+++ ++||||||+||+++.++.+||+|||++...... ....||+.|+||
T Consensus 105 l~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~-i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~y~aP 181 (284)
T 2vgo_A 105 LQK--HGRFDEQRSATFMEELADALHYCHERK-VIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRRRTMCGTLDYLPP 181 (284)
T ss_dssp HHH--HSSCCHHHHHHHHHHHHHHHHHHHTTT-EECCCCSGGGEEECTTCCEEECCCTTCEECSSSCBCCCCSCGGGCCH
T ss_pred HHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC-ceecCCCHHHEEEcCCCCEEEecccccccCcccccccccCCCCcCCH
Confidence 965 357999999999999999999999999 999999999999999999999999998765432 345789999999
Q ss_pred cccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHHHHHHHHHhcccCcCCCC
Q 014478 154 EYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERP 233 (424)
Q Consensus 154 E~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rp 233 (424)
|++.+..++.++||||||+++|+|++|..||.......... .... .....+..++.++.++|.+||..||.+||
T Consensus 182 E~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~----~~~~--~~~~~~~~~~~~~~~li~~~l~~~p~~Rp 255 (284)
T 2vgo_A 182 EMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHR----RIVN--VDLKFPPFLSDGSKDLISKLLRYHPPQRL 255 (284)
T ss_dssp HHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHH----HHHT--TCCCCCTTSCHHHHHHHHHHSCSSGGGSC
T ss_pred HHhccCCCCcccchhhHHHHHHHHHHCCCCCCCCCHhHHHH----HHhc--cccCCCCcCCHHHHHHHHHHhhcCHhhCC
Confidence 99998889999999999999999999998887642221111 1111 12234566788999999999999999999
Q ss_pred CHHHHHHHH
Q 014478 234 NAKSLVISL 242 (424)
Q Consensus 234 s~~~~~~~l 242 (424)
|+++++++-
T Consensus 256 s~~~ll~h~ 264 (284)
T 2vgo_A 256 PLKGVMEHP 264 (284)
T ss_dssp CHHHHHTCH
T ss_pred CHHHHhhCH
Confidence 999999763
|
| >2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-42 Score=326.24 Aligned_cols=235 Identities=17% Similarity=0.237 Sum_probs=190.0
Q ss_pred CCCcccceeee--ecceecccccCCCchhhhHHHHHHHHHhcC-CCcCcceeEEEEEeCCeeeEEEecCCCCCHHhHhcc
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESSDLGETLNLEEAKAVGNL-RSERLANLIGCCYEADERLLVAEFMPNETLAKHLFH 78 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~ 78 (424)
|+||.||.+.+ .+..+++|++..... .+.+|++++.++ +||||+++++++.++...++||||++||+|.+++..
T Consensus 33 G~~g~V~~~~~~~~~~~~avK~~~~~~~---~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~gg~L~~~i~~ 109 (342)
T 2qr7_A 33 GSYSVCKRCIHKATNMEFAVKIIDKSKR---DPTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVTELMKGGELLDKILR 109 (342)
T ss_dssp CSSEEEEEEEETTTTEEEEEEEEETTTC---CCHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHT
T ss_pred CCCEEEEEEEECCCCCEEEEEEEEcccC---ChHHHHHHHHHhcCCCCcCeEEEEEEcCCEEEEEEeCCCCCcHHHHHHH
Confidence 89999999988 466788888765432 345789999888 799999999999999999999999999999999964
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCC-C---CeEEccccccccCCCC----CccccCccC
Q 014478 79 WETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKD-G---NPRLSSFGLMKNSRDG----KSYSTNLAF 150 (424)
Q Consensus 79 ~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~-~---~~kl~Dfg~~~~~~~~----~~~~gt~~y 150 (424)
...+++.++..++.||+.||.|||+++ |+||||||+|||+..+ + .+||+|||+++..... ....||+.|
T Consensus 110 --~~~~~~~~~~~~~~qi~~al~~lH~~g-ivHrDlkp~NIl~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~gt~~y 186 (342)
T 2qr7_A 110 --QKFFSEREASAVLFTITKTVEYLHAQG-VVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLMTPCYTANF 186 (342)
T ss_dssp --CTTCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCCGGGEEESSSSCSGGGEEECCCTTCEECBCTTCCBCCSSCCSSC
T ss_pred --cCCCCHHHHHHHHHHHHHHHHHHHHCC-cEeccCCHHHEEEecCCCCcCeEEEEECCCcccCcCCCCceeccCCCccc
Confidence 467999999999999999999999999 9999999999998433 3 4999999999865432 345689999
Q ss_pred CCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhc--ccCCCCCchhHHHHHHHHHHhcccC
Q 014478 151 TPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDS--ALEGHFSNDEGTELVRLASRCLQSE 228 (424)
Q Consensus 151 ~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~li~~cl~~d 228 (424)
+|||++.+..++.++|||||||++|+|++|..||....... .......+... .........+++++.+||.+||..|
T Consensus 187 ~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~-~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~d 265 (342)
T 2qr7_A 187 VAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDT-PEEILARIGSGKFSLSGGYWNSVSDTAKDLVSKMLHVD 265 (342)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSCSSTTSC-HHHHHHHHHHCCCCCCSTTTTTSCHHHHHHHHHHTCSS
T ss_pred cCHHHhcCCCCCCccCeeeHhHHHHHHhcCCCCCCCCCcCC-HHHHHHHHccCCcccCccccccCCHHHHHHHHHHCCCC
Confidence 99999998789999999999999999999998887531110 01111111111 1122233467889999999999999
Q ss_pred cCCCCCHHHHHHHHH
Q 014478 229 ARERPNAKSLVISLM 243 (424)
Q Consensus 229 p~~Rps~~~~~~~l~ 243 (424)
|++|||+.+++++-.
T Consensus 266 P~~R~t~~~il~hp~ 280 (342)
T 2qr7_A 266 PHQRLTAALVLRHPW 280 (342)
T ss_dssp TTTSCCHHHHTTSHH
T ss_pred hhHCcCHHHHhcCCe
Confidence 999999999997644
|
| >3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.6e-42 Score=314.86 Aligned_cols=235 Identities=15% Similarity=0.167 Sum_probs=186.8
Q ss_pred CCCcccceeee--ecceecccccCCCc--hhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHhHhc
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESSD--LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLF 77 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~~--~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~ 77 (424)
|++|.||.+.+ .+..+++|++.... ...+.+.+|++++++++||||+++++++......++||||+++|+|.+++.
T Consensus 33 G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~ 112 (285)
T 3is5_A 33 GAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVMETCEGGELLERIV 112 (285)
T ss_dssp CSSCEEEEEEETTTCCEEEEEEEEGGGCCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECCCSCCBHHHHHH
T ss_pred CCCeEEEEEEEccCCceEEEEEeeccccchhHHHHHHHHHHHHhCCCchHHhHHHheecCCeEEEEEEeCCCCcHHHHHH
Confidence 89999999987 45667777664433 345788999999999999999999999999999999999999999999885
Q ss_pred cC--CCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeee---cCCCCeEEccccccccCCCC---CccccCcc
Q 014478 78 HW--ETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILF---DKDGNPRLSSFGLMKNSRDG---KSYSTNLA 149 (424)
Q Consensus 78 ~~--~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill---~~~~~~kl~Dfg~~~~~~~~---~~~~gt~~ 149 (424)
.. .+..+++..++.++.|++.||.|||+++ |+||||||+||++ +.++.+||+|||+++..... ....||+.
T Consensus 113 ~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~-ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~t~~ 191 (285)
T 3is5_A 113 SAQARGKALSEGYVAELMKQMMNALAYFHSQH-VVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDEHSTNAAGTAL 191 (285)
T ss_dssp HHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCSGGGEEESSSSTTCCEEECCCCCCCC----------CTTGG
T ss_pred hhhhcccCCCHHHHHHHHHHHHHHHHHHHhCC-EEECCCCHHHEEEecCCCCCCEEEEeeecceecCCcccCcCcccccC
Confidence 32 2467999999999999999999999999 9999999999999 45678999999999765432 34568999
Q ss_pred CCCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHHHHHHHHHhcccCc
Q 014478 150 FTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEA 229 (424)
Q Consensus 150 y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp 229 (424)
|+|||.+. +.++.++||||||+++|+|++|..||............. ..... .......+++++.+++.+||+.||
T Consensus 192 y~aPE~~~-~~~~~~~Di~slG~il~~ll~g~~pf~~~~~~~~~~~~~--~~~~~-~~~~~~~~~~~~~~li~~~L~~dP 267 (285)
T 3is5_A 192 YMAPEVFK-RDVTFKCDIWSAGVVMYFLLTGCLPFTGTSLEEVQQKAT--YKEPN-YAVECRPLTPQAVDLLKQMLTKDP 267 (285)
T ss_dssp GCCHHHHT-TCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHH--HCCCC-CCC--CCCCHHHHHHHHHHTCSCT
T ss_pred cCChHHhc-cCCCcccCeehHHHHHHHHHhCCCCCCCCCHHHHHhhhc--cCCcc-cccccCcCCHHHHHHHHHHccCCh
Confidence 99999986 578899999999999999999999887653322221111 11111 111122357889999999999999
Q ss_pred CCCCCHHHHHHH
Q 014478 230 RERPNAKSLVIS 241 (424)
Q Consensus 230 ~~Rps~~~~~~~ 241 (424)
++|||+.+++++
T Consensus 268 ~~Rps~~e~l~h 279 (285)
T 3is5_A 268 ERRPSAAQVLHH 279 (285)
T ss_dssp TTSCCHHHHHTS
T ss_pred hhCcCHHHHhcC
Confidence 999999999864
|
| >4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.6e-42 Score=319.63 Aligned_cols=237 Identities=17% Similarity=0.173 Sum_probs=187.4
Q ss_pred CCCcccceeeee--cceecccccCCCch---hhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHhHh
Q 014478 2 GGRCSKFSICWF--HCHLKSSVLESSDL---GETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHL 76 (424)
Q Consensus 2 G~~g~v~~~~~~--~~~v~~~~~~~~~~---~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~l 76 (424)
|++|.||.+.+. +..+++|++..... ..+.+.+|++++++++||||+++++++...+..++||||+++++|.+++
T Consensus 14 G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~ 93 (311)
T 4agu_A 14 GSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHLVFEYCDHTVLHELD 93 (311)
T ss_dssp CSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCSEEHHHHHH
T ss_pred cCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccchhheeecCCeEEEEEEeCCCchHHHHH
Confidence 899999999883 67788887754432 3567889999999999999999999999999999999999999999988
Q ss_pred ccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCC----CccccCccCCC
Q 014478 77 FHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG----KSYSTNLAFTP 152 (424)
Q Consensus 77 ~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~----~~~~gt~~y~a 152 (424)
.. ...+++..+..++.|++.||.|||+++ ++||||||+||+++.++.+||+|||+++..... ....||..|+|
T Consensus 94 ~~--~~~~~~~~~~~i~~~l~~~l~~lH~~~-ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~a 170 (311)
T 4agu_A 94 RY--QRGVPEHLVKSITWQTLQAVNFCHKHN-CIHRDVKPENILITKHSVIKLCDFGFARLLTGPSDYYDDEVATRWYRS 170 (311)
T ss_dssp HT--SSCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEECTTSCEEECCCTTCEECC------------GGGCC
T ss_pred hh--hcCCCHHHHHHHHHHHHHHHHHHHHCC-CcCCCCChhhEEEcCCCCEEEeeCCCchhccCcccccCCCcCCccccC
Confidence 64 467999999999999999999999999 999999999999999999999999999875532 23468999999
Q ss_pred cccccc-CCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHh----------h-h----cccCCCC-------
Q 014478 153 PEYMRT-GRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLL----------M-D----SALEGHF------- 209 (424)
Q Consensus 153 PE~~~~-~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~----------~-~----~~~~~~~------- 209 (424)
||++.+ ..++.++||||||+++|+|++|..||+............... . . .......
T Consensus 171 PE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (311)
T 4agu_A 171 PELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQVFSTNQYFSGVKIPDPEDMEPL 250 (311)
T ss_dssp HHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHTCGGGTTCCCCCCSSCCCH
T ss_pred hHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhcccccccccccccccccccCcCCCccccchh
Confidence 999986 568999999999999999999998887642221111000000 0 0 0000000
Q ss_pred ---CchhHHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 014478 210 ---SNDEGTELVRLASRCLQSEARERPNAKSLVIS 241 (424)
Q Consensus 210 ---~~~~~~~l~~li~~cl~~dp~~Rps~~~~~~~ 241 (424)
...++.++.+++.+||+.||++|||+++++++
T Consensus 251 ~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 285 (311)
T 4agu_A 251 ELKFPNISYPALGLLKGCLHMDPTERLTCEQLLHH 285 (311)
T ss_dssp HHHCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHTS
T ss_pred hhhcccccHHHHHHHHHHccCChhhcCCHHHHhcC
Confidence 02457789999999999999999999999865
|
| >1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-41 Score=315.12 Aligned_cols=234 Identities=17% Similarity=0.204 Sum_probs=187.7
Q ss_pred CCCcccceeeee--cceecccccCC---CchhhhHHHHHHHHHhcCCCcCcceeEEEEEe----CCeeeEEEecCCCCCH
Q 014478 2 GGRCSKFSICWF--HCHLKSSVLES---SDLGETLNLEEAKAVGNLRSERLANLIGCCYE----ADERLLVAEFMPNETL 72 (424)
Q Consensus 2 G~~g~v~~~~~~--~~~v~~~~~~~---~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~----~~~~~lv~e~~~~gsL 72 (424)
|++|.||.+.+. +..+++|++.. .....+.+.+|+.++++++||||+++++++.. +...++||||+++|+|
T Consensus 37 G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~lv~e~~~~~~L 116 (290)
T 1t4h_A 37 GSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVTELMTSGTL 116 (290)
T ss_dssp CSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEEEEEECCCSCBH
T ss_pred CCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCCCceEEEEEEecCCCCH
Confidence 899999999884 44566666543 33446788999999999999999999999876 3457899999999999
Q ss_pred HhHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCC-CcccccCCCCCeeec-CCCCeEEccccccccCCCC--CccccCc
Q 014478 73 AKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKG-RALYHDLNAYRILFD-KDGNPRLSSFGLMKNSRDG--KSYSTNL 148 (424)
Q Consensus 73 ~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~-~ivH~dikp~Nill~-~~~~~kl~Dfg~~~~~~~~--~~~~gt~ 148 (424)
.+++.. ...+++..++.++.|++.||.|||+++ +++||||||+|||++ .++.+||+|||++...... ....||+
T Consensus 117 ~~~l~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~~~i~H~dikp~Nil~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~t~ 194 (290)
T 1t4h_A 117 KTYLKR--FKVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRASFAKAVIGTP 194 (290)
T ss_dssp HHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHTSSSCCCCSCCCGGGEEESSTTSCEEECCTTGGGGCCTTSBEESCSSC
T ss_pred HHHHHH--ccCCCHHHHHHHHHHHHHHHHHHHcCCCCEEECCCCHHHEEEECCCCCEEEeeCCCcccccccccccccCCc
Confidence 999964 467899999999999999999999986 499999999999997 7899999999999765543 2356899
Q ss_pred cCCCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHHHHHHHHHhcccC
Q 014478 149 AFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSE 228 (424)
Q Consensus 149 ~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~d 228 (424)
.|+|||.+. +.++.++|||||||++|+|++|..||........ ..............+...++++.++|.+||+.|
T Consensus 195 ~y~aPE~~~-~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~d 270 (290)
T 1t4h_A 195 EFMAPEMYE-EKYDESVDVYAFGMCMLEMATSEYPYSECQNAAQ---IYRRVTSGVKPASFDKVAIPEVKEIIEGCIRQN 270 (290)
T ss_dssp CCCCGGGGG-TCCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHH---HHHHHTTTCCCGGGGGCCCHHHHHHHHHHSCSS
T ss_pred CcCCHHHHh-ccCCCcchHHHHHHHHHHHHhCCCCCCCcCcHHH---HHHHHhccCCccccCCCCCHHHHHHHHHHccCC
Confidence 999999887 5689999999999999999999988865311111 111111111122233445678999999999999
Q ss_pred cCCCCCHHHHHHH
Q 014478 229 ARERPNAKSLVIS 241 (424)
Q Consensus 229 p~~Rps~~~~~~~ 241 (424)
|.+|||+.+++++
T Consensus 271 p~~Rps~~ell~h 283 (290)
T 1t4h_A 271 KDERYSIKDLLNH 283 (290)
T ss_dssp GGGSCCHHHHHTS
T ss_pred hhhCCCHHHHhhC
Confidence 9999999999864
|
| >3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7e-42 Score=335.91 Aligned_cols=234 Identities=13% Similarity=0.165 Sum_probs=181.9
Q ss_pred CCCcccceeee--ecceecccccCCC---chhhhHHHHHHHHHhcCCCcCcceeEEEEEeCC------eeeEEEecCCCC
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESS---DLGETLNLEEAKAVGNLRSERLANLIGCCYEAD------ERLLVAEFMPNE 70 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~---~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~------~~~lv~e~~~~g 70 (424)
|+||.||.+.+ .+..|++|++... ....+.+.+|+.+|+.++||||+++++++.... ..+|||||+++
T Consensus 73 G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~~~~lv~E~~~~- 151 (464)
T 3ttj_A 73 GAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDA- 151 (464)
T ss_dssp CSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCCEEEEEEECCSE-
T ss_pred CCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccccCCeEEEEEeCCCC-
Confidence 89999999977 5677888888643 344678889999999999999999999997653 46999999976
Q ss_pred CHHhHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCC---CccccC
Q 014478 71 TLAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG---KSYSTN 147 (424)
Q Consensus 71 sL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~---~~~~gt 147 (424)
+|.+.+. ..+++..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++..... ....||
T Consensus 152 ~l~~~~~----~~l~~~~~~~~~~qil~aL~~lH~~~-iiHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~gt 226 (464)
T 3ttj_A 152 NLCQVIQ----MELDHERMSYLLYQMLCGIKHLHSAG-IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVT 226 (464)
T ss_dssp EHHHHHT----SCCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEECTTSCEEECCCCCC-----CCCC----CC
T ss_pred CHHHHHh----hcCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCChHhEEEeCCCCEEEEEEEeeeecCCCcccCCCccc
Confidence 5777773 35899999999999999999999999 999999999999999999999999999876543 345789
Q ss_pred ccCCCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhh------------------HhhhcccC-C-
Q 014478 148 LAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFL------------------LLMDSALE-G- 207 (424)
Q Consensus 148 ~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~------------------~~~~~~~~-~- 207 (424)
+.|+|||++.+..++.++|||||||++|||++|+.||++......-..... ........ .
T Consensus 227 ~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pF~g~~~~~~~~~i~~~lg~p~~~~~~~~~~~~~~~~~~~~~~~~ 306 (464)
T 3ttj_A 227 RYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAG 306 (464)
T ss_dssp CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHTTSCHHHHHHHTTSCCCCC
T ss_pred ccccCHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHcchhhhhHhhcccccCC
Confidence 999999999998999999999999999999999999886421111000000 00000000 0
Q ss_pred -----CCC-----------chhHHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 014478 208 -----HFS-----------NDEGTELVRLASRCLQSEARERPNAKSLVIS 241 (424)
Q Consensus 208 -----~~~-----------~~~~~~l~~li~~cl~~dp~~Rps~~~~~~~ 241 (424)
.++ ...++++.+||.+||..||++|||++++++|
T Consensus 307 ~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~H 356 (464)
T 3ttj_A 307 LTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQH 356 (464)
T ss_dssp CCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred CChHHhCcccccccccccccccCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 000 0126789999999999999999999999976
|
| >2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-41 Score=320.86 Aligned_cols=232 Identities=17% Similarity=0.198 Sum_probs=194.7
Q ss_pred CCCcccceeeee--cceecccccCCC----chhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHhH
Q 014478 2 GGRCSKFSICWF--HCHLKSSVLESS----DLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKH 75 (424)
Q Consensus 2 G~~g~v~~~~~~--~~~v~~~~~~~~----~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~ 75 (424)
|+||.||.+.+. +..+++|++... ....+.+.+|+.+++.++||||+++++++.+.+..++||||+++++|.++
T Consensus 52 G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~ 131 (335)
T 2owb_A 52 GGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLEL 131 (335)
T ss_dssp ETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECCCTTCBHHHH
T ss_pred CCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEEecCCCCCHHHH
Confidence 899999999883 456677766432 24467888999999999999999999999999999999999999999999
Q ss_pred hccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCC----CccccCccCC
Q 014478 76 LFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG----KSYSTNLAFT 151 (424)
Q Consensus 76 l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~----~~~~gt~~y~ 151 (424)
+.. ...+++.+++.++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++..... ....||..|+
T Consensus 132 ~~~--~~~l~~~~~~~i~~qi~~aL~~LH~~~-ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~ 208 (335)
T 2owb_A 132 HKR--RKALTEPEARYYLRQIVLGCQYLHRNR-VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYI 208 (335)
T ss_dssp HHH--HCSCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCCGGGEEECTTCCEEECCCTTCEECCSTTCCBCCCCSCCSSC
T ss_pred Hhc--cCCCCHHHHHHHHHHHHHHHHHHHHCC-CEecCCCchhEEEcCCCCEEEeeccCceecccCcccccccCCCcccc
Confidence 864 457999999999999999999999999 999999999999999999999999999865422 3356899999
Q ss_pred CccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHHHHHHHHHhcccCcCC
Q 014478 152 PPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARE 231 (424)
Q Consensus 152 aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~ 231 (424)
|||++.+..++.++||||||+++|+|++|..||........ ....... ....+..+++++.++|.+||+.||++
T Consensus 209 aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~----~~~~~~~--~~~~~~~~~~~~~~li~~~l~~dp~~ 282 (335)
T 2owb_A 209 APEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKET----YLRIKKN--EYSIPKHINPVAASLIQKMLQTDPTA 282 (335)
T ss_dssp CHHHHHTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHH----HHHHHHT--CCCCCTTSCHHHHHHHHHHTCSSGGG
T ss_pred CHHHhccCCCCchhhHHHHHHHHHHHHHCcCCCCCCCHHHH----HHHHhcC--CCCCCccCCHHHHHHHHHHccCChhH
Confidence 99999988899999999999999999999988876422211 1111111 12345567789999999999999999
Q ss_pred CCCHHHHHHHH
Q 014478 232 RPNAKSLVISL 242 (424)
Q Consensus 232 Rps~~~~~~~l 242 (424)
|||+++++++-
T Consensus 283 Rps~~ell~~~ 293 (335)
T 2owb_A 283 RPTINELLNDE 293 (335)
T ss_dssp SCCGGGGGGSH
T ss_pred CcCHHHHhcCc
Confidence 99999999763
|
| >4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.2e-42 Score=331.61 Aligned_cols=246 Identities=12% Similarity=0.125 Sum_probs=197.5
Q ss_pred CCCcccceeeee--cceecccccCCCc--hhhhHHHHHHHHHhcCCCcCcceeEEEEEeCC--eeeEEEecCCCCCHHhH
Q 014478 2 GGRCSKFSICWF--HCHLKSSVLESSD--LGETLNLEEAKAVGNLRSERLANLIGCCYEAD--ERLLVAEFMPNETLAKH 75 (424)
Q Consensus 2 G~~g~v~~~~~~--~~~v~~~~~~~~~--~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~--~~~lv~e~~~~gsL~~~ 75 (424)
|+||.||.+.+. +..|++|++.... ...+.+.+|++++++++||||+++++++.... ..++||||++||+|.++
T Consensus 20 G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~lv~e~~~~g~L~~~ 99 (396)
T 4eut_A 20 GATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTV 99 (396)
T ss_dssp CSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEECCCTTEEHHHH
T ss_pred CCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCCCeEEEeeccCCCCeeEEEEecCCCCCHHHH
Confidence 899999999984 6778888876433 33577889999999999999999999998765 67999999999999999
Q ss_pred hccCC-CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeee----cCCCCeEEccccccccCCCC---CccccC
Q 014478 76 LFHWE-TQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILF----DKDGNPRLSSFGLMKNSRDG---KSYSTN 147 (424)
Q Consensus 76 l~~~~-~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill----~~~~~~kl~Dfg~~~~~~~~---~~~~gt 147 (424)
+.... ...+++.+++.++.||+.||.|||+++ |+||||||+|||+ +.++.+||+|||+++..... ....||
T Consensus 100 l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~-ivH~Dlkp~NIll~~~~~~~~~~kL~DFG~a~~~~~~~~~~~~~gt 178 (396)
T 4eut_A 100 LEEPSNAYGLPESEFLIVLRDVVGGMNHLRENG-IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVSLYGT 178 (396)
T ss_dssp TTSGGGTTCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEEEECTTSCEEEEECCGGGCEECCCGGGSSCSSSC
T ss_pred HHhhhcccCCCHHHHHHHHHHHHHHHHHHHHCC-EEECCcCHHHEEEeecCCCceeEEEecCCCceEccCCCccccccCC
Confidence 96532 234999999999999999999999999 9999999999999 77778999999999876543 245689
Q ss_pred ccCCCcccccc--------CCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhcc---------------
Q 014478 148 LAFTPPEYMRT--------GRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSA--------------- 204 (424)
Q Consensus 148 ~~y~aPE~~~~--------~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~--------------- 204 (424)
+.|+|||++.+ ..++.++|||||||++|||++|+.||....................
T Consensus 179 ~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~ 258 (396)
T 4eut_A 179 EEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGKPSGAISGVQKAENGP 258 (396)
T ss_dssp CTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECTTCTTTCHHHHHHHHHSCCTTCCEEEECSTTCC
T ss_pred ccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcccchHHHHHHHhcCCCcccchhheeccCCC
Confidence 99999999875 4678899999999999999999988753211111111111111110
Q ss_pred --------cCCCCCchhHHHHHHHHHHhcccCcCCCCCHHHHHHHHHHHhhh
Q 014478 205 --------LEGHFSNDEGTELVRLASRCLQSEARERPNAKSLVISLMSLQKE 248 (424)
Q Consensus 205 --------~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~~~~~l~~~~~~ 248 (424)
.....+..++..+.+++.+||..||++|||+.++++.+..+...
T Consensus 259 ~~~~~~~~~~~~l~~~~~~~l~~ll~~~L~~dP~~R~s~~e~l~~l~~il~~ 310 (396)
T 4eut_A 259 IDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDILHR 310 (396)
T ss_dssp EEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHHTC
T ss_pred cccCccCCcccccchHHHhhchHHHHHhhccChhhhccHHHHHHHHHHHhhc
Confidence 11123456788999999999999999999999999999887754
|
| >1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.1e-42 Score=324.16 Aligned_cols=241 Identities=15% Similarity=0.201 Sum_probs=193.9
Q ss_pred CCCcccceeeeecceecccccCCCchhhhHHHHHHHHHhc--CCCcCcceeEEEEEeCC----eeeEEEecCCCCCHHhH
Q 014478 2 GGRCSKFSICWFHCHLKSSVLESSDLGETLNLEEAKAVGN--LRSERLANLIGCCYEAD----ERLLVAEFMPNETLAKH 75 (424)
Q Consensus 2 G~~g~v~~~~~~~~~v~~~~~~~~~~~~~~~~~E~~~l~~--l~h~~iv~~~~~~~~~~----~~~lv~e~~~~gsL~~~ 75 (424)
|++|.||.+.+.+..|++|++.... ...+.+|++++.. ++||||+++++++.... ..++||||+++|+|.++
T Consensus 53 G~~g~Vy~~~~~~~~vavK~~~~~~--~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~ 130 (342)
T 1b6c_B 53 GRFGEVWRGKWRGEEVAVKIFSSRE--ERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDY 130 (342)
T ss_dssp ETTEEEEEEEETTEEEEEEEECGGG--HHHHHHHHHHHHHSCCCCTTBCCEEEEEECCCSSCCCEEEEECCCTTCBHHHH
T ss_pred CCCcEEEEEEEcCccEEEEEeCchh--HHHHHHHHHHHHHhhcCCCcEEEEEeeecccCCccceeEEEEeecCCCcHHHH
Confidence 8999999999998899999886443 4567788888887 79999999999998876 78999999999999999
Q ss_pred hccCCCCCCCHHHHHHHHHHHHHHHHHHH--------hCCCcccccCCCCCeeecCCCCeEEccccccccCCCC------
Q 014478 76 LFHWETQPMKWAMRLRVALYLAQALEYCS--------SKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG------ 141 (424)
Q Consensus 76 l~~~~~~~l~~~~~~~i~~qi~~~L~~lH--------~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~------ 141 (424)
+.. ..+++.+++.++.|++.||.||| +++ ++||||||+|||++.++.+||+|||+++.....
T Consensus 131 l~~---~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~-ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~ 206 (342)
T 1b6c_B 131 LNR---YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPA-IAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDI 206 (342)
T ss_dssp HHH---CCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCE-EECSCCSGGGEEECTTSCEEECCCTTCEEEETTTTEEEE
T ss_pred Hhc---cCccHHHHHHHHHHHHHHHHHHHHHHhhhcccCC-eeeCCCCHHHEEECCCCCEEEEECCCceecccccccccc
Confidence 954 46999999999999999999999 888 999999999999999999999999998765432
Q ss_pred --CccccCccCCCccccccC------CCCCCcceehhHHHHHHHhhC----------CCCCCchhhHHHhhhhhhH-hhh
Q 014478 142 --KSYSTNLAFTPPEYMRTG------RVTPESVVYSFGTMLLDLLSG----------KHIPPSHALDLIRSKNFLL-LMD 202 (424)
Q Consensus 142 --~~~~gt~~y~aPE~~~~~------~~~~~~Dv~slG~~l~el~~g----------~~~~~~~~~~~~~~~~~~~-~~~ 202 (424)
....||+.|+|||++.+. .++.++|||||||++|||++| ..||............... ...
T Consensus 207 ~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~ 286 (342)
T 1b6c_B 207 APNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCE 286 (342)
T ss_dssp CCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTT
T ss_pred ccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhccCcCCcccccccCccccCcCcccHHHHHHHHHH
Confidence 334689999999999865 334689999999999999999 5555432110000011111 112
Q ss_pred cccCCCCC-----chhHHHHHHHHHHhcccCcCCCCCHHHHHHHHHHHhhh
Q 014478 203 SALEGHFS-----NDEGTELVRLASRCLQSEARERPNAKSLVISLMSLQKE 248 (424)
Q Consensus 203 ~~~~~~~~-----~~~~~~l~~li~~cl~~dp~~Rps~~~~~~~l~~~~~~ 248 (424)
.......+ ..++..+.+++.+||+.||++|||+.+++++|+.+.++
T Consensus 287 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~i~~~ 337 (342)
T 1b6c_B 287 QKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQ 337 (342)
T ss_dssp SCCCCCCCGGGGTSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred HHhCCCCcccccchhHHHHHHHHHHHHhccChhhCCCHHHHHHHHHHHHHH
Confidence 22222233 35678899999999999999999999999999998765
|
| >3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=4e-42 Score=322.94 Aligned_cols=236 Identities=16% Similarity=0.234 Sum_probs=184.6
Q ss_pred CCCcccceeee--ecceecccccCCCch--hhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHhHhc
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESSDL--GETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLF 77 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~~~--~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~ 77 (424)
|++|.||.+.+ .+..+++|++..... ....+.+|+++++.++||||+++++++..++..++||||+++ +|.+++.
T Consensus 13 G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~-~l~~~~~ 91 (324)
T 3mtl_A 13 GTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEYLDK-DLKQYLD 91 (324)
T ss_dssp CSSEEEEEEEETTTCCEEEEEEECC------CCCCCCCHHHHSCCCCTTBCCEEEEEECSSCEEEEEECCSE-EHHHHHH
T ss_pred CCCEEEEEEEECCCCcEEEEEEEecccccccchhHHHHHHHHHhcCCCCCCeeeeEEeeCCEEEEEeccccc-CHHHHHH
Confidence 89999999988 466788887754332 233566899999999999999999999999999999999975 9999886
Q ss_pred cCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCC----CccccCccCCCc
Q 014478 78 HWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG----KSYSTNLAFTPP 153 (424)
Q Consensus 78 ~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~----~~~~gt~~y~aP 153 (424)
. .+..+++..+..++.|++.||.|||+++ |+||||||+|||++.++.+||+|||+++..... ....||+.|+||
T Consensus 92 ~-~~~~~~~~~~~~~~~qi~~aL~~LH~~~-ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~t~~y~aP 169 (324)
T 3mtl_A 92 D-CGNIINMHNVKLFLFQLLRGLAYCHRQK-VLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTYDNEVVTLWYRPP 169 (324)
T ss_dssp H-TTTCCCHHHHHHHHHHHHHHHHHHHHTT-EEESSCCGGGEEECTTCCEEECSSSEEECC------------CGGGCCH
T ss_pred h-cCCCCCHHHHHHHHHHHHHHHHHHHHCC-ccCCCcCHHHEEECCCCCEEEccCcccccccCCccccccccCcccccCh
Confidence 5 3557999999999999999999999999 999999999999999999999999998865432 234679999999
Q ss_pred ccccc-CCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhcccCCC------------------------
Q 014478 154 EYMRT-GRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGH------------------------ 208 (424)
Q Consensus 154 E~~~~-~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------------ 208 (424)
|++.+ ..++.++|||||||++|+|++|+.||+............ ..........
T Consensus 170 E~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (324)
T 3mtl_A 170 DILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFIF-RILGTPTEETWPGILSNEEFKTYNYPKYRAEALL 248 (324)
T ss_dssp HHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHH-HHHCCCCTTTSTTGGGCHHHHHTCCCCCCCCCHH
T ss_pred hhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH-HHhCCCChHhchhhhcchhhcccccccccchhhh
Confidence 99886 468999999999999999999999887653222111111 0000000000
Q ss_pred -CCchhHHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 014478 209 -FSNDEGTELVRLASRCLQSEARERPNAKSLVIS 241 (424)
Q Consensus 209 -~~~~~~~~l~~li~~cl~~dp~~Rps~~~~~~~ 241 (424)
....+++++.+||.+||+.||++|||+++++++
T Consensus 249 ~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 282 (324)
T 3mtl_A 249 SHAPRLDSDGADLLTKLLQFEGRNRISAEDAMKH 282 (324)
T ss_dssp HHCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred hhcCCCCHHHHHHHHHHcCcCcccCCCHHHHhcC
Confidence 112356789999999999999999999999875
|
| >2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-41 Score=311.57 Aligned_cols=234 Identities=15% Similarity=0.109 Sum_probs=191.8
Q ss_pred CCCcccceeee--ecceecccccCCC--chhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHhHhc
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESS--DLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLF 77 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~--~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~ 77 (424)
|++|.||.+.+ .+..+++|++... ....+.+.+|+.+++.++||||+++++++..++..++||||+++++|.+++.
T Consensus 18 G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~ 97 (276)
T 2yex_A 18 GAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIE 97 (276)
T ss_dssp CSSSEEEEEEETTTCCEEEEEEEEGGGCTTHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCTTEEGGGGSB
T ss_pred CCCcEEEEEEECCCCcEEEEEEeeeccchhhhHHHHHHHHHHHhcCCCCceeeeeEEEcCCEEEEEEEecCCCcHHHHHh
Confidence 89999999987 4677888776433 2345788999999999999999999999999999999999999999999986
Q ss_pred cCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCC------CCccccCccCC
Q 014478 78 HWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRD------GKSYSTNLAFT 151 (424)
Q Consensus 78 ~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~------~~~~~gt~~y~ 151 (424)
. ...+++.+++.++.|++.||.|||+++ ++||||||+||+++.++.+||+|||++..... .....||+.|+
T Consensus 98 ~--~~~~~~~~~~~~~~~i~~~l~~lH~~~-i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~ 174 (276)
T 2yex_A 98 P--DIGMPEPDAQRFFHQLMAGVVYLHGIG-ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYV 174 (276)
T ss_dssp T--TTBCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEECTTCCEEECCCTTCEECEETTEECCBCCCCSCGGGC
T ss_pred h--ccCCCHHHHHHHHHHHHHHHHHHHhCC-eeccCCChHHEEEccCCCEEEeeCCCccccCCCcchhcccCCccccCcc
Confidence 4 457999999999999999999999999 99999999999999999999999999875432 23456899999
Q ss_pred CccccccCCC-CCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHHHHHHHHHhcccCcC
Q 014478 152 PPEYMRTGRV-TPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEAR 230 (424)
Q Consensus 152 aPE~~~~~~~-~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~ 230 (424)
|||.+.+..+ +.++||||||+++|+|++|..||........ .................+++.+.++|.+||+.||+
T Consensus 175 aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~ 251 (276)
T 2yex_A 175 APELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQ---EYSDWKEKKTYLNPWKKIDSAPLALLHKILVENPS 251 (276)
T ss_dssp CGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSCTTSH---HHHHHHTTCTTSTTGGGSCHHHHHHHHHHSCSSTT
T ss_pred ChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCchHHH---HHHHhhhcccccCchhhcCHHHHHHHHHHCCCCch
Confidence 9999987665 7789999999999999999988865321111 11111111111122345678999999999999999
Q ss_pred CCCCHHHHHHH
Q 014478 231 ERPNAKSLVIS 241 (424)
Q Consensus 231 ~Rps~~~~~~~ 241 (424)
+|||+++++++
T Consensus 252 ~Rps~~~il~~ 262 (276)
T 2yex_A 252 ARITIPDIKKD 262 (276)
T ss_dssp TSCCHHHHTTC
T ss_pred hCCCHHHHhcC
Confidence 99999999854
|
| >2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-41 Score=314.27 Aligned_cols=232 Identities=17% Similarity=0.198 Sum_probs=194.7
Q ss_pred CCCcccceeeee--cceecccccCCC----chhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHhH
Q 014478 2 GGRCSKFSICWF--HCHLKSSVLESS----DLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKH 75 (424)
Q Consensus 2 G~~g~v~~~~~~--~~~v~~~~~~~~----~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~ 75 (424)
|++|.||.+.+. +..+++|++... ....+.+.+|+.+++.++||||+++++++..++..++||||+++++|.++
T Consensus 26 G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~ 105 (294)
T 2rku_A 26 GGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLEL 105 (294)
T ss_dssp ETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEECCTTCBHHHH
T ss_pred cCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCEEEEEEecCCCCCHHHH
Confidence 899999999884 556677766432 23467788999999999999999999999999999999999999999999
Q ss_pred hccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCC----CccccCccCC
Q 014478 76 LFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG----KSYSTNLAFT 151 (424)
Q Consensus 76 l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~----~~~~gt~~y~ 151 (424)
+.. ...+++.+++.++.|++.||.|||+++ ++||||||+||+++.++.+||+|||++...... ....||+.|+
T Consensus 106 ~~~--~~~~~~~~~~~i~~qi~~~l~~lH~~~-i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~ 182 (294)
T 2rku_A 106 HKR--RKALTEPEARYYLRQIVLGCQYLHRNR-VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYI 182 (294)
T ss_dssp HHH--HCSCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEECTTCCEEECCCTTCEECCSTTCCBCCCCSCCSSC
T ss_pred HHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC-ccccCCChHhEEEcCCCCEEEEeccCceecccCccccccccCCCCcC
Confidence 864 457999999999999999999999999 999999999999999999999999998865422 3346899999
Q ss_pred CccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHHHHHHHHHhcccCcCC
Q 014478 152 PPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARE 231 (424)
Q Consensus 152 aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~ 231 (424)
|||++.+..++.++||||||+++|+|++|..||........ ....... ....+..+++.+.+++.+||+.||++
T Consensus 183 aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~----~~~~~~~--~~~~~~~~~~~~~~li~~~l~~~p~~ 256 (294)
T 2rku_A 183 APEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKET----YLRIKKN--EYSIPKHINPVAASLIQKMLQTDPTA 256 (294)
T ss_dssp CHHHHTTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHH----HHHHHTT--CCCCCTTSCHHHHHHHHHHTCSSGGG
T ss_pred CcchhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH----HHHHhhc--cCCCccccCHHHHHHHHHHcccChhh
Confidence 99999988899999999999999999999988876422211 1111111 22345567889999999999999999
Q ss_pred CCCHHHHHHHH
Q 014478 232 RPNAKSLVISL 242 (424)
Q Consensus 232 Rps~~~~~~~l 242 (424)
|||+++++++-
T Consensus 257 Rps~~~ll~~~ 267 (294)
T 2rku_A 257 RPTINELLNDE 267 (294)
T ss_dssp SCCGGGGGGSH
T ss_pred CcCHHHHhhCh
Confidence 99999999764
|
| >2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-41 Score=315.40 Aligned_cols=236 Identities=14% Similarity=0.172 Sum_probs=192.1
Q ss_pred CCCcccceeee--ecceecccccCCCc-hhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHhHhcc
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESSD-LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFH 78 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~ 78 (424)
|++|.||.+.+ .+..|++|++.... ...+.+.+|+.+++.++||||+++++++...+..++||||+++++|.+++..
T Consensus 33 G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~ 112 (295)
T 2clq_A 33 GTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSALLRS 112 (295)
T ss_dssp CSSSEEEEEEETTTCCEEEEEEEECCCC---HHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCSEEEHHHHHHH
T ss_pred cCcEEEEEEEECCCCeEEEEEEccCCchHHHHHHHHHHHHHHhCCCCCEeeEeeEEEeCCcEEEEEEeCCCCCHHHHHHh
Confidence 89999999987 45667777765443 3467789999999999999999999999999999999999999999999975
Q ss_pred CC-CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecC-CCCeEEccccccccCCCC----CccccCccCCC
Q 014478 79 WE-TQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDK-DGNPRLSSFGLMKNSRDG----KSYSTNLAFTP 152 (424)
Q Consensus 79 ~~-~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~-~~~~kl~Dfg~~~~~~~~----~~~~gt~~y~a 152 (424)
.. ...+++..+..++.|++.||.|||+++ ++||||||+||+++. ++.+||+|||+++..... ....||+.|+|
T Consensus 113 ~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~-i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~a 191 (295)
T 2clq_A 113 KWGPLKDNEQTIGFYTKQILEGLKYLHDNQ-IVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETFTGTLQYMA 191 (295)
T ss_dssp TTCCCTTCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEEETTTCCEEECCTTTCEESCC-----CCCCCCGGGCC
T ss_pred hccCCCccHHHHHHHHHHHHHHHHHHHhCC-EEccCCChhhEEEECCCCCEEEeecccccccCCCCCcccccCCCccccC
Confidence 32 235678999999999999999999999 999999999999987 899999999999865432 34568999999
Q ss_pred ccccccCC--CCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHHHHHHHHHhcccCcC
Q 014478 153 PEYMRTGR--VTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEAR 230 (424)
Q Consensus 153 PE~~~~~~--~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~ 230 (424)
||++.++. ++.++||||||+++|+|++|..||........ ..............+..+++++.++|.+||..||+
T Consensus 192 PE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~ 268 (295)
T 2clq_A 192 PEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQA---AMFKVGMFKVHPEIPESMSAEAKAFILKCFEPDPD 268 (295)
T ss_dssp HHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGGGSSHHH---HHHHHHHHCCCCCCCTTSCHHHHHHHHHTTCSSTT
T ss_pred hhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccCCCchhH---HHHhhccccccccccccCCHHHHHHHHHHccCChh
Confidence 99998654 78899999999999999999988754311111 11111112233345667788999999999999999
Q ss_pred CCCCHHHHHHH
Q 014478 231 ERPNAKSLVIS 241 (424)
Q Consensus 231 ~Rps~~~~~~~ 241 (424)
+|||+.+++.+
T Consensus 269 ~Rps~~~ll~~ 279 (295)
T 2clq_A 269 KRACANDLLVD 279 (295)
T ss_dssp TSCCHHHHHTS
T ss_pred hCCCHHHHhcC
Confidence 99999999854
|
| >2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-41 Score=316.41 Aligned_cols=234 Identities=15% Similarity=0.194 Sum_probs=193.0
Q ss_pred CCCcccceeee--ecceecccccCCCch-hhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHhHhcc
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESSDL-GETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFH 78 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~~~-~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~ 78 (424)
|++|.||.+.+ .+..+++|++..... ....+.+|+.+++.++||||+++++++......++||||+++++|.+++..
T Consensus 20 G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~ 99 (304)
T 2jam_A 20 GAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIYESTTHYYLVMQLVSGGELFDRILE 99 (304)
T ss_dssp CSSEEEEEEEETTTCCEEEEEEEECC------HHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHH
T ss_pred CCCceEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHhCCCCCeeehhhhcccCCEEEEEEEcCCCccHHHHHHH
Confidence 89999999987 467788888765432 346788999999999999999999999999999999999999999999864
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeee---cCCCCeEEccccccccCCCCC--ccccCccCCCc
Q 014478 79 WETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILF---DKDGNPRLSSFGLMKNSRDGK--SYSTNLAFTPP 153 (424)
Q Consensus 79 ~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill---~~~~~~kl~Dfg~~~~~~~~~--~~~gt~~y~aP 153 (424)
...+++.+++.++.|++.||.|||+++ ++||||||+||++ +.++.+||+|||+++...... ...||+.|+||
T Consensus 100 --~~~~~~~~~~~~~~qi~~~l~~lH~~~-i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~y~aP 176 (304)
T 2jam_A 100 --RGVYTEKDASLVIQQVLSAVKYLHENG-IVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNGIMSTACGTPGYVAP 176 (304)
T ss_dssp --HSCCCHHHHHHHHHHHHHHHHHHHHTT-CCCCSCCGGGCEESSSSTTCCEEBCSCSTTCCCCCBTTHHHHSCCCBCCT
T ss_pred --cCCCCHHHHHHHHHHHHHHHHHHHHCC-ccccCCCHHHEEEecCCCCCCEEEccCCcceecCCCccccccCCCCccCh
Confidence 457899999999999999999999999 9999999999999 778899999999987654332 34589999999
Q ss_pred cccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhcc--cCCCCCchhHHHHHHHHHHhcccCcCC
Q 014478 154 EYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSA--LEGHFSNDEGTELVRLASRCLQSEARE 231 (424)
Q Consensus 154 E~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~li~~cl~~dp~~ 231 (424)
|++.+..++.++|||||||++|+|++|..||........ ...+.... ........+++++.++|.+||..||.+
T Consensus 177 E~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~----~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~ 252 (304)
T 2jam_A 177 EVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETESKL----FEKIKEGYYEFESPFWDDISESAKDFICHLLEKDPNE 252 (304)
T ss_dssp TTBSSCSCCHHHHHHHHHHHHHHHHHSSCTTTTSCHHHH----HHHHHHCCCCCCTTTTTTSCHHHHHHHHHHHCSSTTT
T ss_pred HHhccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHH----HHHHHcCCCCCCccccccCCHHHHHHHHHHcCCChhH
Confidence 999988899999999999999999999988876422211 11111111 122334567889999999999999999
Q ss_pred CCCHHHHHHHH
Q 014478 232 RPNAKSLVISL 242 (424)
Q Consensus 232 Rps~~~~~~~l 242 (424)
|||+.+++++-
T Consensus 253 Rps~~~~l~h~ 263 (304)
T 2jam_A 253 RYTCEKALSHP 263 (304)
T ss_dssp SCCHHHHHTSH
T ss_pred CcCHHHHhcCc
Confidence 99999998753
|
| >3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ... | Back alignment and structure |
|---|
Probab=100.00 E-value=5.9e-42 Score=315.51 Aligned_cols=235 Identities=14% Similarity=0.144 Sum_probs=190.5
Q ss_pred CCCcccceeeee--cceecccccCCCc-------hhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCH
Q 014478 2 GGRCSKFSICWF--HCHLKSSVLESSD-------LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETL 72 (424)
Q Consensus 2 G~~g~v~~~~~~--~~~v~~~~~~~~~-------~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL 72 (424)
|++|.||.+.+. +..+++|++.... ...+.+.+|+.++++++||||+++++++......++||||+++++|
T Consensus 16 G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 95 (283)
T 3bhy_A 16 GQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGEL 95 (283)
T ss_dssp CSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEECCCSCBH
T ss_pred cCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecCCCeEEEEEeecCCCcH
Confidence 899999999884 6677777764332 1357889999999999999999999999999999999999999999
Q ss_pred HhHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCC----CeEEccccccccCCCC---Cccc
Q 014478 73 AKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDG----NPRLSSFGLMKNSRDG---KSYS 145 (424)
Q Consensus 73 ~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~----~~kl~Dfg~~~~~~~~---~~~~ 145 (424)
.+++.. ...+++.+++.++.|++.||.|||+++ ++||||||+||+++.++ .+||+|||++...... ....
T Consensus 96 ~~~l~~--~~~~~~~~~~~~~~~i~~~l~~lH~~~-i~H~dl~p~Nil~~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~~ 172 (283)
T 3bhy_A 96 FDFLAE--KESLTEDEATQFLKQILDGVHYLHSKR-IAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIF 172 (283)
T ss_dssp HHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEESCSSSSSCCEEECCCTTCEECC--------C
T ss_pred HHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCC-ccCCCCChHHEEEecCCCCCCceEEEecccceeccCCCcccccC
Confidence 999964 457999999999999999999999999 99999999999998877 7999999999876543 2346
Q ss_pred cCccCCCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHHHHHHHHHhc
Q 014478 146 TNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCL 225 (424)
Q Consensus 146 gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl 225 (424)
+|+.|+|||++.+..++.++||||||+++|+|++|..||............ ..............+++.+.+++.+||
T Consensus 173 ~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~li~~~l 250 (283)
T 3bhy_A 173 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNI--SAVNYDFDEEYFSNTSELAKDFIRRLL 250 (283)
T ss_dssp CCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHH--HTTCCCCCHHHHTTCCHHHHHHHHTTS
T ss_pred CCcCccCcceecCCCCCcchhhhhHHHHHHHHHHCCCCCCCcchHHHHHHh--HhcccCCcchhcccCCHHHHHHHHHHc
Confidence 899999999999888999999999999999999999888764222111100 000000010111345678999999999
Q ss_pred ccCcCCCCCHHHHHHH
Q 014478 226 QSEARERPNAKSLVIS 241 (424)
Q Consensus 226 ~~dp~~Rps~~~~~~~ 241 (424)
..||++|||+.+++++
T Consensus 251 ~~dp~~Rps~~~~l~h 266 (283)
T 3bhy_A 251 VKDPKRRMTIAQSLEH 266 (283)
T ss_dssp CSSGGGSCCHHHHHHC
T ss_pred cCCHhHCcCHHHHHhC
Confidence 9999999999999985
|
| >3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.9e-42 Score=338.90 Aligned_cols=234 Identities=16% Similarity=0.115 Sum_probs=194.8
Q ss_pred CCCcccceeee--ecceecccccCCC----chhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHhH
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESS----DLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKH 75 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~----~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~ 75 (424)
|++|.||.+.. .+..+++|++... ......+.+|+.++++++||||+++++++...+..++||||+++|+|.++
T Consensus 37 G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~~~~L~~~ 116 (484)
T 3nyv_A 37 GSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDE 116 (484)
T ss_dssp ETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEECCCCSCBHHHH
T ss_pred CCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEEecCCCCCHHHH
Confidence 89999999987 5677888887433 23467899999999999999999999999999999999999999999999
Q ss_pred hccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeee---cCCCCeEEccccccccCCCCC---ccccCcc
Q 014478 76 LFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILF---DKDGNPRLSSFGLMKNSRDGK---SYSTNLA 149 (424)
Q Consensus 76 l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill---~~~~~~kl~Dfg~~~~~~~~~---~~~gt~~ 149 (424)
+.. ...+++.+++.++.||+.||.|||+++ |+||||||+|||+ +.++.+||+|||+++...... ...||+.
T Consensus 117 ~~~--~~~~~~~~~~~i~~qi~~~l~~lH~~~-ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~ 193 (484)
T 3nyv_A 117 IIS--RKRFSEVDAARIIRQVLSGITYMHKNK-IVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAY 193 (484)
T ss_dssp HHT--CSCCBHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEESSSSTTCCEEECCTTHHHHBCCCCSHHHHTTGGG
T ss_pred HHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC-eeeCCCCHHHEEEecCCCCCcEEEEeeeeeEEcccccccccCCCCcc
Confidence 864 567999999999999999999999999 9999999999999 567899999999998765443 3468999
Q ss_pred CCCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhcccCCC--CCchhHHHHHHHHHHhccc
Q 014478 150 FTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGH--FSNDEGTELVRLASRCLQS 227 (424)
Q Consensus 150 y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~li~~cl~~ 227 (424)
|+|||++.+ .++.++|||||||++|+|++|..||........ ...+........ ....+++++.+||.+||+.
T Consensus 194 y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~----~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~ 268 (484)
T 3nyv_A 194 YIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNGANEYDI----LKKVEKGKYTFELPQWKKVSESAKDLIRKMLTY 268 (484)
T ss_dssp TCCHHHHHT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH----HHHHHHCCCCCCSGGGGGSCHHHHHHHHHHTCS
T ss_pred ccCceeecC-CCCCcceeHHHHHHHHHHHHCCCCCCCCCHHHH----HHHHHcCCCCCCCcccccCCHHHHHHHHHHCCC
Confidence 999999875 789999999999999999999998876422211 111122211111 2235788999999999999
Q ss_pred CcCCCCCHHHHHHHHH
Q 014478 228 EARERPNAKSLVISLM 243 (424)
Q Consensus 228 dp~~Rps~~~~~~~l~ 243 (424)
||.+|||+.+++++-.
T Consensus 269 dp~~R~s~~e~l~h~~ 284 (484)
T 3nyv_A 269 VPSMRISARDALDHEW 284 (484)
T ss_dssp SGGGSCCHHHHHTSHH
T ss_pred ChhHCcCHHHHhhChh
Confidence 9999999999998643
|
| >2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-42 Score=322.25 Aligned_cols=236 Identities=17% Similarity=0.167 Sum_probs=186.9
Q ss_pred CCCcccceeee--ecceecccccCCCc-hhhhHHHHHHHHHhcC-CCcCcceeEEEEEeCCeeeEEEecCCCCCHHhHhc
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESSD-LGETLNLEEAKAVGNL-RSERLANLIGCCYEADERLLVAEFMPNETLAKHLF 77 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~~-~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~ 77 (424)
|++|.||.+.+ .+..+++|++.... .....+.+|++++.++ +||||+++++++.+.+..++||||+++|+|.+++.
T Consensus 24 G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~ 103 (316)
T 2ac3_A 24 GAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVFEKMRGGSILSHIH 103 (316)
T ss_dssp CSSEEEEEEECSSSCCEEEEEEEECCSSCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCTTCBHHHHHH
T ss_pred CceEEEEEEEEcCCCcEEEEEEEeeCcchhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEEEEcCCCCcHHHHHh
Confidence 89999999986 56778888875443 3467889999999985 79999999999999999999999999999999996
Q ss_pred cCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCC---eEEccccccccCCCC-----------Cc
Q 014478 78 HWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGN---PRLSSFGLMKNSRDG-----------KS 143 (424)
Q Consensus 78 ~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~---~kl~Dfg~~~~~~~~-----------~~ 143 (424)
. ...+++.++..++.||+.||.|||+++ |+||||||+|||++.++. +||+|||++...... ..
T Consensus 104 ~--~~~~~~~~~~~i~~qi~~~l~~lH~~~-ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~ 180 (316)
T 2ac3_A 104 K--RRHFNELEASVVVQDVASALDFLHNKG-IAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTPELLT 180 (316)
T ss_dssp H--HSSCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEESCSSSSCSEEECCTTCCC------------------
T ss_pred c--cCCCCHHHHHHHHHHHHHHHHHHHhCC-ceeCCCCHHHEEEccCCCcCceEEEEccCccccccCCcccccccccccc
Confidence 5 457999999999999999999999999 999999999999988775 999999998754321 12
Q ss_pred cccCccCCCcccccc-----CCCCCCcceehhHHHHHHHhhCCCCCCchhhHH--H--------hhhhhhHhhhcccCCC
Q 014478 144 YSTNLAFTPPEYMRT-----GRVTPESVVYSFGTMLLDLLSGKHIPPSHALDL--I--------RSKNFLLLMDSALEGH 208 (424)
Q Consensus 144 ~~gt~~y~aPE~~~~-----~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~--~--------~~~~~~~~~~~~~~~~ 208 (424)
..||+.|+|||++.+ ..++.++|||||||++|+|++|..||....... + ........+... ...
T Consensus 181 ~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~-~~~ 259 (316)
T 2ac3_A 181 PCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQNMLFESIQEG-KYE 259 (316)
T ss_dssp -CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCCCCSCSCC----CCHHHHHHHHHHHHHC-CCC
T ss_pred ccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCcccccccccccccccchhHHHHHHHHHhcc-Ccc
Confidence 358999999999875 458899999999999999999998886531100 0 000011111111 111
Q ss_pred CC----chhHHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 014478 209 FS----NDEGTELVRLASRCLQSEARERPNAKSLVIS 241 (424)
Q Consensus 209 ~~----~~~~~~l~~li~~cl~~dp~~Rps~~~~~~~ 241 (424)
.+ ..+++++.+||.+||+.||.+|||+.+++++
T Consensus 260 ~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~h 296 (316)
T 2ac3_A 260 FPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQH 296 (316)
T ss_dssp CCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred cCchhcccCCHHHHHHHHHHhhCChhhCCCHHHHhcC
Confidence 22 2357789999999999999999999999875
|
| >2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.4e-42 Score=320.16 Aligned_cols=241 Identities=18% Similarity=0.220 Sum_probs=192.7
Q ss_pred CCCcccceeee--ecceecccccCC-CchhhhHHHHHHHHHhcCCCcCcceeEEEEEe----CCeeeEEEecCCCCCHHh
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLES-SDLGETLNLEEAKAVGNLRSERLANLIGCCYE----ADERLLVAEFMPNETLAK 74 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~----~~~~~lv~e~~~~gsL~~ 74 (424)
|++|.||.+.+ .+..+++|++.. .....+.+.+|+++++.++||||+++++++.. ....++||||+++|+|.+
T Consensus 40 G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~ 119 (317)
T 2buj_A 40 GGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEAWLLLPFFKRGTLWN 119 (317)
T ss_dssp --CEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETTEEEEEEEEECCTTCBHHH
T ss_pred CCCeEEEEEEecCCCcEEEEEEEecCCHHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCCCceeEEEEEeCCCCcHHH
Confidence 89999999986 667788887643 33456788999999999999999999999973 346789999999999999
Q ss_pred HhccC--CCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCC-----------
Q 014478 75 HLFHW--ETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG----------- 141 (424)
Q Consensus 75 ~l~~~--~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~----------- 141 (424)
++... .+..+++.+++.++.|++.||.|||+++ ++||||||+||+++.++.+||+|||++......
T Consensus 120 ~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~-ivH~dlkp~NIl~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~ 198 (317)
T 2buj_A 120 EIERLKDKGNFLTEDQILWLLLGICRGLEAIHAKG-YAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQ 198 (317)
T ss_dssp HHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEECTTSCEEECCCSSCEESCEEEESHHHHHHHH
T ss_pred HHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC-cccCCCCHHHEEEcCCCCEEEEecCcchhccccccccccccccc
Confidence 88642 3467999999999999999999999999 999999999999999999999999988765421
Q ss_pred --CccccCccCCCccccccCC---CCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHH
Q 014478 142 --KSYSTNLAFTPPEYMRTGR---VTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTE 216 (424)
Q Consensus 142 --~~~~gt~~y~aPE~~~~~~---~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (424)
....||+.|+|||.+.+.. ++.++|||||||++|+|++|..||..... .................+..++++
T Consensus 199 ~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~ 275 (317)
T 2buj_A 199 DWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQ---KGDSVALAVQNQLSIPQSPRHSSA 275 (317)
T ss_dssp HHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTHHHHH---TTSCHHHHHHCC--CCCCTTSCHH
T ss_pred ccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChhhhhc---ccchhhHHhhccCCCCccccCCHH
Confidence 1234689999999987543 68899999999999999999987753211 111111222222233334567889
Q ss_pred HHHHHHHhcccCcCCCCCHHHHHHHHHHHh
Q 014478 217 LVRLASRCLQSEARERPNAKSLVISLMSLQ 246 (424)
Q Consensus 217 l~~li~~cl~~dp~~Rps~~~~~~~l~~~~ 246 (424)
+.++|.+||+.||.+|||+.+++++|+.+.
T Consensus 276 l~~li~~~l~~dp~~Rps~~~ll~~L~~~~ 305 (317)
T 2buj_A 276 LWQLLNSMMTVDPHQRPHIPLLLSQLEALQ 305 (317)
T ss_dssp HHHHHHHHTCSSGGGSCCHHHHHHHHHHTC
T ss_pred HHHHHHHHhhcChhhCCCHHHHHHHhhhcC
Confidence 999999999999999999999999998765
|
| >3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-41 Score=336.57 Aligned_cols=234 Identities=16% Similarity=0.141 Sum_probs=192.8
Q ss_pred CCCcccceeee--ecceecccccCCC---chhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHhHh
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESS---DLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHL 76 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~---~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~l 76 (424)
|++|.||.+.+ .+..+++|++... ......+.+|+++|++++||||+++++++......++||||++||+|.+++
T Consensus 33 G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~~~~L~~~~ 112 (486)
T 3mwu_A 33 GSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEI 112 (486)
T ss_dssp CSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHH
T ss_pred cCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeEEEEEEcCCEEEEEEEcCCCCcHHHHH
Confidence 89999999987 4677888877432 234567899999999999999999999999999999999999999999988
Q ss_pred ccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeec---CCCCeEEccccccccCCCC---CccccCccC
Q 014478 77 FHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFD---KDGNPRLSSFGLMKNSRDG---KSYSTNLAF 150 (424)
Q Consensus 77 ~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~---~~~~~kl~Dfg~~~~~~~~---~~~~gt~~y 150 (424)
.. ...+++.++..++.||+.||.|||+++ |+||||||+|||++ .++.+||+|||+++..... ....||+.|
T Consensus 113 ~~--~~~~~~~~~~~i~~qi~~al~~lH~~~-ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y 189 (486)
T 3mwu_A 113 IK--RKRFSEHDAARIIKQVFSGITYMHKHN-IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYY 189 (486)
T ss_dssp HH--HSSCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEESSSSTTCCEEECSCSCTTTBCCC----CCTTGGGG
T ss_pred Hh--cCCCCHHHHHHHHHHHHHHHHHHHHCC-eEeccCchHHEEEecCCCCCCEEEEECCcCeECCCCCccCCCcCCCCC
Confidence 65 457999999999999999999999999 99999999999994 4567999999999865543 345689999
Q ss_pred CCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhcccCC--CCCchhHHHHHHHHHHhcccC
Q 014478 151 TPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEG--HFSNDEGTELVRLASRCLQSE 228 (424)
Q Consensus 151 ~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~li~~cl~~d 228 (424)
+|||++.+ .++.++|||||||++|+|++|..||........ ...+....... +....+++++.++|.+||+.|
T Consensus 190 ~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~----~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~d 264 (486)
T 3mwu_A 190 IAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEYDI----LKRVETGKYAFDLPQWRTISDDAKDLIRKMLTFH 264 (486)
T ss_dssp CCGGGGGS-CCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHH----HHHHHHTCCCSCSGGGGGSCHHHHHHHHHHTCSS
T ss_pred CCHHHhCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH----HHHHHhCCCCCCCcccCCCCHHHHHHHHHHcCCC
Confidence 99999984 689999999999999999999998876532211 11111111111 122356889999999999999
Q ss_pred cCCCCCHHHHHHHHH
Q 014478 229 ARERPNAKSLVISLM 243 (424)
Q Consensus 229 p~~Rps~~~~~~~l~ 243 (424)
|.+|||+.+++++-.
T Consensus 265 p~~R~t~~~~l~hp~ 279 (486)
T 3mwu_A 265 PSLRITATQCLEHPW 279 (486)
T ss_dssp TTTSCCHHHHHHCHH
T ss_pred hhhCcCHHHHhcCHh
Confidence 999999999998643
|
| >2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-41 Score=345.88 Aligned_cols=239 Identities=19% Similarity=0.249 Sum_probs=196.9
Q ss_pred CCCcccceeeeec-----ceecccccCCC--chhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHh
Q 014478 2 GGRCSKFSICWFH-----CHLKSSVLESS--DLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAK 74 (424)
Q Consensus 2 G~~g~v~~~~~~~-----~~v~~~~~~~~--~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~ 74 (424)
|+||.||.+.+.. ..+++|++... ....+.|.+|+.++++++||||+++++++.+ +..++||||+++|+|.+
T Consensus 401 G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~-~~~~lv~E~~~~g~L~~ 479 (656)
T 2j0j_A 401 GQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITE-NPVWIIMELCTLGELRS 479 (656)
T ss_dssp CSSCCEEEEEECCSSSCCEEEEEEECSSTTCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEEECCTTCBHHH
T ss_pred CCCEEEEEEEEecCCCccEEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEec-CceEEEEEcCCCCcHHH
Confidence 8999999998843 34666766543 3345789999999999999999999999854 56899999999999999
Q ss_pred HhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCCC-----ccccCcc
Q 014478 75 HLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGK-----SYSTNLA 149 (424)
Q Consensus 75 ~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~~-----~~~gt~~ 149 (424)
++.. ....+++..++.++.|++.||.|||+++ |+||||||+|||++.++.+||+|||+++...... ...+|+.
T Consensus 480 ~l~~-~~~~l~~~~~~~i~~qi~~aL~~LH~~g-ivHrDikp~NILl~~~~~vkL~DFG~a~~~~~~~~~~~~~~~~t~~ 557 (656)
T 2j0j_A 480 FLQV-RKFSLDLASLILYAYQLSTALAYLESKR-FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIK 557 (656)
T ss_dssp HHHH-TTTTCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEEEETTEEEECCCCCCCSCCC----------CCGG
T ss_pred HHHh-ccCCCCHHHHHHHHHHHHHHHHHHHhCC-ccccccchHhEEEeCCCCEEEEecCCCeecCCCcceeccCCCCCcc
Confidence 9975 3457999999999999999999999999 9999999999999999999999999998765432 2345789
Q ss_pred CCCccccccCCCCCCcceehhHHHHHHHhh-CCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHHHHHHHHHhcccC
Q 014478 150 FTPPEYMRTGRVTPESVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSE 228 (424)
Q Consensus 150 y~aPE~~~~~~~~~~~Dv~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~d 228 (424)
|+|||++.+..++.++|||||||++|||++ |..||...... .....+........+..+++.+.++|.+||..|
T Consensus 558 y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~-----~~~~~i~~~~~~~~~~~~~~~l~~li~~~l~~d 632 (656)
T 2j0j_A 558 WMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNN-----DVIGRIENGERLPMPPNCPPTLYSLMTKCWAYD 632 (656)
T ss_dssp GCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHH-----HHHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSS
T ss_pred eeCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCCCCCCCCHH-----HHHHHHHcCCCCCCCccccHHHHHHHHHHcCCC
Confidence 999999998899999999999999999997 88777654221 112222223334566778899999999999999
Q ss_pred cCCCCCHHHHHHHHHHHhhh
Q 014478 229 ARERPNAKSLVISLMSLQKE 248 (424)
Q Consensus 229 p~~Rps~~~~~~~l~~~~~~ 248 (424)
|++|||+.++++.|..+.++
T Consensus 633 P~~RPs~~el~~~L~~il~~ 652 (656)
T 2j0j_A 633 PSRRPRFTELKAQLSTILEE 652 (656)
T ss_dssp GGGSCCHHHHHHHHHHHHHH
T ss_pred hhHCcCHHHHHHHHHHHHHH
Confidence 99999999999999988754
|
| >3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-41 Score=335.25 Aligned_cols=236 Identities=14% Similarity=0.144 Sum_probs=176.3
Q ss_pred CCCcccceeee--ecceecccccCCC---chhhhHHHHHHHHHhcCCCcCcceeEEEEEeC-----CeeeEEEecCCCCC
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESS---DLGETLNLEEAKAVGNLRSERLANLIGCCYEA-----DERLLVAEFMPNET 71 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~---~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~-----~~~~lv~e~~~~gs 71 (424)
|+||.||.+.+ .+..|++|++... ....+.+.+|+++|+.++||||+++++++... ...|+||||+ +|+
T Consensus 64 G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~lv~e~~-~~~ 142 (458)
T 3rp9_A 64 GSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDELYVVLEIA-DSD 142 (458)
T ss_dssp ----CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCCEEEEECCC-SEE
T ss_pred cCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCceEEEEEecc-ccc
Confidence 89999999976 5777888877543 23457889999999999999999999999543 4689999998 469
Q ss_pred HHhHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCC----------
Q 014478 72 LAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG---------- 141 (424)
Q Consensus 72 L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~---------- 141 (424)
|.+++.. ...+++..+..++.||+.||.|||+++ ||||||||+|||++.++.+||+|||+++.....
T Consensus 143 L~~~~~~--~~~l~~~~~~~~~~qi~~aL~~LH~~~-iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~ 219 (458)
T 3rp9_A 143 FKKLFRT--PVYLTELHIKTLLYNLLVGVKYVHSAG-ILHRDLKPANCLVNQDCSVKVCDFGLARTVDYPENGNSQLPIS 219 (458)
T ss_dssp HHHHHHS--SCCCCHHHHHHHHHHHHHHHHHHHHTT-CBCCCCCGGGEEECTTCCEEECCCTTCBCTTSCTTCCCCCC--
T ss_pred hhhhccc--CCCCCHHHHHHHHHHHHHHHHHHHhCC-cCCCCCChhhEEECCCCCEeecccccchhccCccccccccccC
Confidence 9999864 567999999999999999999999999 999999999999999999999999999865421
Q ss_pred ---------------------CccccCccCCCccccc-cCCCCCCcceehhHHHHHHHhh-----------CCCCCCchh
Q 014478 142 ---------------------KSYSTNLAFTPPEYMR-TGRVTPESVVYSFGTMLLDLLS-----------GKHIPPSHA 188 (424)
Q Consensus 142 ---------------------~~~~gt~~y~aPE~~~-~~~~~~~~Dv~slG~~l~el~~-----------g~~~~~~~~ 188 (424)
....||+.|+|||++. +..++.++|||||||++|||++ |+.+|++..
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~il~elltg~~~~~~~~~~~~p~f~g~~ 299 (458)
T 3rp9_A 220 PREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNMIKENVAYHADRGPLFPGSS 299 (458)
T ss_dssp -------------------------CCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHTTSTTTCSSGGGCCCSCC---
T ss_pred ccccccccccccccccccccccCCcccccccChHHhhCCCCCCcHhHHHHHHHHHHHHHHhccccccccccccccCCCCc
Confidence 2335799999999864 5569999999999999999998 565565432
Q ss_pred hHHH----------------hhhh---hhH--------------------hhhccc---C---CCCCchhHHHHHHHHHH
Q 014478 189 LDLI----------------RSKN---FLL--------------------LMDSAL---E---GHFSNDEGTELVRLASR 223 (424)
Q Consensus 189 ~~~~----------------~~~~---~~~--------------------~~~~~~---~---~~~~~~~~~~l~~li~~ 223 (424)
.... .... +.. ...... . ....+..++++.+||.+
T Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~ 379 (458)
T 3rp9_A 300 CFPLSPDQKAGNDFKFHTRGNRDQLNVIFNILGTPSEEDIEALEKEDAKRYIRIFPKREGTDLAERFPASSADAIHLLKR 379 (458)
T ss_dssp -----------------CHHHHHHHHHHHHHHCCCCHHHHHTSSCHHHHHHHTTSCCCCCCCGGGGSTTSCHHHHHHHHH
T ss_pred cccccccccccccccccccCCHHHHHHHHHHcCCCCHHHHhhcCCHHHHHHHHhcCCCCCCCHHHHCCCCCHHHHHHHHH
Confidence 1000 0000 000 000000 0 00112347889999999
Q ss_pred hcccCcCCCCCHHHHHHH
Q 014478 224 CLQSEARERPNAKSLVIS 241 (424)
Q Consensus 224 cl~~dp~~Rps~~~~~~~ 241 (424)
||..||++|||++++++|
T Consensus 380 mL~~dP~~R~t~~e~L~H 397 (458)
T 3rp9_A 380 MLVFNPNKRITINECLAH 397 (458)
T ss_dssp HSCSSTTTSCCHHHHHHS
T ss_pred HhccCccccCCHHHHhcC
Confidence 999999999999999976
|
| >3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-41 Score=320.33 Aligned_cols=236 Identities=15% Similarity=0.155 Sum_probs=181.3
Q ss_pred CCCcccceeee--ecceecccccCCCch---hhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHhHh
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESSDL---GETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHL 76 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~~~---~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~l 76 (424)
|++|.||.+.+ .+..+++|++..... ....+.+|++++++++||||+++++++..++..++||||+++ +|.+++
T Consensus 45 G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~-~L~~~~ 123 (329)
T 3gbz_A 45 GTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHHNHRLHLIFEYAEN-DLKKYM 123 (329)
T ss_dssp CSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGCCCTTBCCEEEEEEETTEEEEEEECCSE-EHHHHH
T ss_pred cCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcceEEEEEecCCEEEEEEecCCC-CHHHHH
Confidence 89999999976 567788888754432 245678999999999999999999999999999999999985 999999
Q ss_pred ccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeec-----CCCCeEEccccccccCCCC----CccccC
Q 014478 77 FHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFD-----KDGNPRLSSFGLMKNSRDG----KSYSTN 147 (424)
Q Consensus 77 ~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~-----~~~~~kl~Dfg~~~~~~~~----~~~~gt 147 (424)
.. ...+++..++.++.||+.||.|||+++ |+||||||+|||++ .++.+||+|||+++..... ....||
T Consensus 124 ~~--~~~~~~~~~~~i~~ql~~~l~~LH~~~-ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~t 200 (329)
T 3gbz_A 124 DK--NPDVSMRVIKSFLYQLINGVNFCHSRR-CLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGIPIRQFTHEIIT 200 (329)
T ss_dssp HH--CTTCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEEEC-----CCEEEECCTTHHHHHC-----------C
T ss_pred hh--cCCCCHHHHHHHHHHHHHHHHHHHhCC-EECCCCCHHHEEEecCCCCccceEEECcCCCccccCCcccccCCCcCC
Confidence 75 456999999999999999999999999 99999999999994 4455999999999765422 334679
Q ss_pred ccCCCccccccC-CCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhcc------------cCCC------
Q 014478 148 LAFTPPEYMRTG-RVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSA------------LEGH------ 208 (424)
Q Consensus 148 ~~y~aPE~~~~~-~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~------ 208 (424)
+.|+|||++.+. .++.++|||||||++|+|++|..||..................+. ....
T Consensus 201 ~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (329)
T 3gbz_A 201 LWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQLFKIFEVLGLPDDTTWPGVTALPDWKQSFPKFRG 280 (329)
T ss_dssp CTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCCTTCCCCCC
T ss_pred ccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCCCCHHHHHHHHHHHhCCCchhhhhhhhhhhhhhhhhhhhcc
Confidence 999999999875 489999999999999999999988876432211111111000000 0000
Q ss_pred ------CCchhHHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 014478 209 ------FSNDEGTELVRLASRCLQSEARERPNAKSLVIS 241 (424)
Q Consensus 209 ------~~~~~~~~l~~li~~cl~~dp~~Rps~~~~~~~ 241 (424)
.+..+++++.+||.+||+.||++|||+++++++
T Consensus 281 ~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 319 (329)
T 3gbz_A 281 KTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALEH 319 (329)
T ss_dssp CCHHHHHGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred ccHhhhcccccCHHHHHHHHHHccCChhhCCCHHHHhCC
Confidence 011256789999999999999999999999864
|
| >2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.5e-42 Score=314.58 Aligned_cols=237 Identities=18% Similarity=0.208 Sum_probs=192.5
Q ss_pred CCCcccceeee--ecceecccccCCC---chhhhHHHHHHHHHhcCCCcCcceeEEEEEe--CCeeeEEEecCCCCCHHh
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESS---DLGETLNLEEAKAVGNLRSERLANLIGCCYE--ADERLLVAEFMPNETLAK 74 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~---~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~--~~~~~lv~e~~~~gsL~~ 74 (424)
|++|.||.+.+ .+..+++|++... ....+.+.+|++++++++||||+++++++.. +...++||||+++|+|.+
T Consensus 17 G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~~~~~~L~~ 96 (279)
T 2w5a_A 17 GSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLAS 96 (279)
T ss_dssp CSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGGTEEEEEEECCTTEEHHH
T ss_pred CCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCceEEEEEeCCCCCCHHH
Confidence 89999999988 4666777777543 3346788999999999999999999998854 567899999999999999
Q ss_pred HhccC--CCCCCCHHHHHHHHHHHHHHHHHHHhCCC----cccccCCCCCeeecCCCCeEEccccccccCCCCC----cc
Q 014478 75 HLFHW--ETQPMKWAMRLRVALYLAQALEYCSSKGR----ALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGK----SY 144 (424)
Q Consensus 75 ~l~~~--~~~~l~~~~~~~i~~qi~~~L~~lH~~~~----ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~~----~~ 144 (424)
++... ....+++..++.++.|++.||.|||+++. ++||||||+||+++.++.+||+|||+++...... ..
T Consensus 97 ~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~ivH~dl~p~NIl~~~~~~~kl~dfg~~~~~~~~~~~~~~~ 176 (279)
T 2w5a_A 97 VITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKTF 176 (279)
T ss_dssp HHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHC------CCCCCSGGGEEECSSSCEEECCCCHHHHC---CHHHHHH
T ss_pred HHHhhcccCCCCCHHHHHHHHHHHHHHHHHHhcccCCCCeeEEeccchhhEEEcCCCCEEEecCchheeecccccccccc
Confidence 98642 23459999999999999999999999763 9999999999999999999999999998765443 24
Q ss_pred ccCccCCCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHHHHHHHHHh
Q 014478 145 STNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRC 224 (424)
Q Consensus 145 ~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c 224 (424)
.||+.|+|||++.+..++.++||||||+++|+|++|..||....... ....+........+..++.++.++|.+|
T Consensus 177 ~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~-----~~~~i~~~~~~~~~~~~~~~l~~li~~~ 251 (279)
T 2w5a_A 177 VGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKE-----LAGKIREGKFRRIPYRYSDELNEIITRM 251 (279)
T ss_dssp HSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHHSSCSSCCSSHHH-----HHHHHHHTCCCCCCTTSCHHHHHHHHHH
T ss_pred CCCccccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCcccCHHH-----HHHHHhhcccccCCcccCHHHHHHHHHH
Confidence 68999999999998889999999999999999999998877642211 1122222223345667788999999999
Q ss_pred cccCcCCCCCHHHHHHHHH
Q 014478 225 LQSEARERPNAKSLVISLM 243 (424)
Q Consensus 225 l~~dp~~Rps~~~~~~~l~ 243 (424)
|+.||.+|||+.++++++.
T Consensus 252 l~~~p~~Rps~~~ll~~~~ 270 (279)
T 2w5a_A 252 LNLKDYHRPSVEEILENPL 270 (279)
T ss_dssp TCSSGGGSCCHHHHHTSTT
T ss_pred cCCCcccCCCHHHHHhChh
Confidence 9999999999999997654
|
| >3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.6e-42 Score=329.55 Aligned_cols=234 Identities=18% Similarity=0.213 Sum_probs=182.2
Q ss_pred CCCcccceeee--ecceecccccCCC---chhhhHHHHHHHHHhcCC-CcCcceeEEEEEeCC--eeeEEEecCCCCCHH
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESS---DLGETLNLEEAKAVGNLR-SERLANLIGCCYEAD--ERLLVAEFMPNETLA 73 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~---~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~--~~~lv~e~~~~gsL~ 73 (424)
|+||.||.+.+ .+..|++|++... ......+.+|+.+++.+. ||||+++++++...+ ..|+||||++ |+|.
T Consensus 20 G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~~~~lv~e~~~-~~L~ 98 (388)
T 3oz6_A 20 GAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDRDVYLVFDYME-TDLH 98 (388)
T ss_dssp ----CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSSCEEEEEECCS-EEHH
T ss_pred CCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCCEEEEEecccC-cCHH
Confidence 89999999987 5677888877432 344667889999999997 999999999997644 6899999997 5999
Q ss_pred hHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCC-------------
Q 014478 74 KHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRD------------- 140 (424)
Q Consensus 74 ~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~------------- 140 (424)
+++.. ..+++..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++....
T Consensus 99 ~~~~~---~~~~~~~~~~i~~qi~~~L~~LH~~~-ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~ 174 (388)
T 3oz6_A 99 AVIRA---NILEPVHKQYVVYQLIKVIKYLHSGG-LLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSIN 174 (388)
T ss_dssp HHHHH---TCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEECTTCCEEECCCTTCEESSSCCCCCCCGGGCCC
T ss_pred HHHHc---CCCCHHHHHHHHHHHHHHHHHHHhCC-EEeCCCCHHHeEEcCCCCEEecCCccccccccccccccccccccc
Confidence 99854 57999999999999999999999999 99999999999999999999999999976432
Q ss_pred ------------CCccccCccCCCcccccc-CCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhc----
Q 014478 141 ------------GKSYSTNLAFTPPEYMRT-GRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDS---- 203 (424)
Q Consensus 141 ------------~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~---- 203 (424)
.....||+.|+|||++.+ ..++.++|||||||++|||++|+.||++......-.... .....
T Consensus 175 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~-~~~~~p~~~ 253 (388)
T 3oz6_A 175 ENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSSTMNQLERII-GVIDFPSNE 253 (388)
T ss_dssp ---------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHH-HHHCCCCHH
T ss_pred ccccccccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH-HhcCCCCHH
Confidence 123468999999999986 568999999999999999999999987642211111000 00000
Q ss_pred --------------------------ccC------------CCCCchhHHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 014478 204 --------------------------ALE------------GHFSNDEGTELVRLASRCLQSEARERPNAKSLVIS 241 (424)
Q Consensus 204 --------------------------~~~------------~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~~~~~ 241 (424)
... ...+..+++++.+|+.+||+.||++|||++++++|
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~~L~~dP~~R~t~~e~l~H 329 (388)
T 3oz6_A 254 DVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLKINPKADCNEEALDLLDKLLQFNPNKRISANDALKH 329 (388)
T ss_dssp HHHTSCCSSHHHHHHHHHHHCC-----CCCCHHHHHHHHHHHCTTCCCCHHHHHHHHHHCCSSGGGSCCHHHHTTS
T ss_pred HHHhccCHHHHHHHHhCcccccccCCCHHHhCcchhhhcccccccccCCHHHHHHHHHhhccCcccCCCHHHHhCC
Confidence 000 00112456789999999999999999999999866
|
| >3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-41 Score=331.10 Aligned_cols=238 Identities=14% Similarity=0.166 Sum_probs=193.3
Q ss_pred CCCcccceeee--ecceecccccCCCchhhhHHHHHHHHHhcC------CCcCcceeEEEEEeCCeeeEEEecCCCCCHH
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESSDLGETLNLEEAKAVGNL------RSERLANLIGCCYEADERLLVAEFMPNETLA 73 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~~~~~~~~~~E~~~l~~l------~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~ 73 (424)
|+||.||++.+ .+..|++|++.........+.+|+++++.+ .|+||+++++++......++||||+. ++|.
T Consensus 108 G~fg~V~~a~~~~~~~~vAvK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~lv~e~~~-~~L~ 186 (429)
T 3kvw_A 108 GSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHICMTFELLS-MNLY 186 (429)
T ss_dssp SSSEEEEEEEETTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEETTEEEEEECCCC-CBHH
T ss_pred CccEEEEEEEECCCCcEEEEEEECCccchHHHHHHHHHHHHHHhhccccCCcCEEEEEeecccCCeEEEEEeccC-CCHH
Confidence 89999999987 467789999887766677888899888887 57799999999999999999999996 5999
Q ss_pred hHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCC--eEEccccccccCCCC-CccccCccC
Q 014478 74 KHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGN--PRLSSFGLMKNSRDG-KSYSTNLAF 150 (424)
Q Consensus 74 ~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~--~kl~Dfg~~~~~~~~-~~~~gt~~y 150 (424)
+++.......+++..+..++.||+.||.|||+++ |+||||||+|||++.++. +||+|||+++..... ....||+.|
T Consensus 187 ~~l~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~-ivHrDlKp~NILl~~~~~~~vkL~DFG~a~~~~~~~~~~~gt~~y 265 (429)
T 3kvw_A 187 ELIKKNKFQGFSLPLVRKFAHSILQCLDALHKNR-IIHCDLKPENILLKQQGRSGIKVIDFGSSCYEHQRVYTYIQSRFY 265 (429)
T ss_dssp HHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHHT-EECSCCSGGGEEESSTTSCCEEECCCTTCEETTCCCCSSCSCGGG
T ss_pred HHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCCHHHeEEccCCCcceEEeecccceecCCcccccCCCCCc
Confidence 9997655567999999999999999999999999 999999999999999887 999999999765543 456789999
Q ss_pred CCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhh-----------------Hhhhcc-cC------
Q 014478 151 TPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFL-----------------LLMDSA-LE------ 206 (424)
Q Consensus 151 ~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~-----------------~~~~~~-~~------ 206 (424)
+|||++.+..++.++|||||||++|||++|..||+.......-..... ...... ..
T Consensus 266 ~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 345 (429)
T 3kvw_A 266 RAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMIELLGMPSQKLLDASKRAKNFVSSKGYPRYCTVT 345 (429)
T ss_dssp CCHHHHHTBCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHTBTTHHHHBCTTSCBTTSCEE
T ss_pred cChHHHhCCCCCchHHHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHhhhhhhhccCCCCCccccccc
Confidence 999999988999999999999999999999988876422111100000 000000 00
Q ss_pred ---------------------C--------CCCchhHHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 014478 207 ---------------------G--------HFSNDEGTELVRLASRCLQSEARERPNAKSLVIS 241 (424)
Q Consensus 207 ---------------------~--------~~~~~~~~~l~~li~~cl~~dp~~Rps~~~~~~~ 241 (424)
. ..+...++++.+||.+||+.||++|||+++++++
T Consensus 346 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~dli~~~L~~dP~~Rpta~e~L~H 409 (429)
T 3kvw_A 346 TLSDGSVVLNGGRSRRGKLRGPPESREWGNALKGCDDPLFLDFLKQCLEWDPAVRMTPGQALRH 409 (429)
T ss_dssp CCCC--CEECCEECTTCCEECSTTCSCHHHHTTTCCCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred ccccccccccccccchhhccCCccchhhHhhccccchHHHHHHHHHHCCCChhhCCCHHHHhCC
Confidence 0 0011236789999999999999999999999975
|
| >3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-41 Score=336.64 Aligned_cols=232 Identities=16% Similarity=0.154 Sum_probs=188.1
Q ss_pred CCCcccceeee--ecceecccccCCCc---hhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHhHh
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESSD---LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHL 76 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~~---~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~l 76 (424)
|+||.||.+.+ .+..+++|++.... .....+.+|+.+++.++||||++++++|.+....++||||++||+|.+++
T Consensus 48 G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~~g~L~~~~ 127 (494)
T 3lij_A 48 GAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVMECYKGGELFDEI 127 (494)
T ss_dssp C---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCCSCBHHHHH
T ss_pred CCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEecCCCCcHHHHH
Confidence 89999999988 45667887775432 33567899999999999999999999999999999999999999999988
Q ss_pred ccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCC---CCeEEccccccccCCCC---CccccCccC
Q 014478 77 FHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKD---GNPRLSSFGLMKNSRDG---KSYSTNLAF 150 (424)
Q Consensus 77 ~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~---~~~kl~Dfg~~~~~~~~---~~~~gt~~y 150 (424)
.. ...+++..+..++.||+.||.|||+++ |+||||||+|||++.+ +.+||+|||+++..... ....||+.|
T Consensus 128 ~~--~~~~~~~~~~~i~~qi~~~l~~lH~~~-ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~~~~~~~~~~~~~gt~~y 204 (494)
T 3lij_A 128 IH--RMKFNEVDAAVIIKQVLSGVTYLHKHN-IVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKKMKERLGTAYY 204 (494)
T ss_dssp HH--HSSCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEESCSSTTCCEEECCCTTCEECBTTBCBCCCCSCTTT
T ss_pred HH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-ceeccCChhhEEEeCCCCCCcEEEEECCCCeECCCCccccccCCCcCe
Confidence 65 457999999999999999999999999 9999999999999764 55999999999866543 345689999
Q ss_pred CCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhcccCC--CCCchhHHHHHHHHHHhcccC
Q 014478 151 TPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEG--HFSNDEGTELVRLASRCLQSE 228 (424)
Q Consensus 151 ~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~li~~cl~~d 228 (424)
+|||++. +.++.++|||||||++|+|++|..||........ ...+....... .....+++++.++|.+||+.|
T Consensus 205 ~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~----~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~d 279 (494)
T 3lij_A 205 IAPEVLR-KKYDEKCDVWSIGVILFILLAGYPPFGGQTDQEI----LRKVEKGKYTFDSPEWKNVSEGAKDLIKQMLQFD 279 (494)
T ss_dssp CCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH----HHHHHHTCCCCCSGGGTTSCHHHHHHHHHHTCSS
T ss_pred eCHHHHc-ccCCCchhHHHHHHHHHHHHhCCCCCCCCCHHHH----HHHHHhCCCCCCchhcccCCHHHHHHHHHHCCCC
Confidence 9999987 5799999999999999999999998876532211 11111111111 111346789999999999999
Q ss_pred cCCCCCHHHHHHH
Q 014478 229 ARERPNAKSLVIS 241 (424)
Q Consensus 229 p~~Rps~~~~~~~ 241 (424)
|.+|||+.+++++
T Consensus 280 p~~R~s~~e~l~h 292 (494)
T 3lij_A 280 SQRRISAQQALEH 292 (494)
T ss_dssp TTTSCCHHHHHTC
T ss_pred hhhCccHHHHhcC
Confidence 9999999999986
|
| >1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-41 Score=323.64 Aligned_cols=235 Identities=17% Similarity=0.211 Sum_probs=186.4
Q ss_pred CCCcccceeee--ecceecccccCCC---chhhhHHHHHHHHHhcCCCcCcceeEEEEEeCC------eeeEEEecCCCC
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESS---DLGETLNLEEAKAVGNLRSERLANLIGCCYEAD------ERLLVAEFMPNE 70 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~---~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~------~~~lv~e~~~~g 70 (424)
|++|.||.+.+ .+..|++|++... ....+.+.+|+++|+.++||||+++++++.... ..++||||+ ++
T Consensus 36 G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~~~~lv~e~~-~~ 114 (367)
T 1cm8_A 36 GAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFTDFYLVMPFM-GT 114 (367)
T ss_dssp ----CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCCCCEEEEECC-SE
T ss_pred cCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccccCceEEEEEecC-CC
Confidence 89999999987 5777888887443 234567889999999999999999999998753 359999999 88
Q ss_pred CHHhHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCC-CccccCcc
Q 014478 71 TLAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG-KSYSTNLA 149 (424)
Q Consensus 71 sL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~-~~~~gt~~ 149 (424)
+|.+++.. ..+++..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++..... ....+|+.
T Consensus 115 ~L~~~~~~---~~l~~~~~~~~~~qi~~~L~~LH~~~-ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~t~~ 190 (367)
T 1cm8_A 115 DLGKLMKH---EKLGEDRIQFLVYQMLKGLRYIHAAG-IIHRDLKPGNLAVNEDCELKILDFGLARQADSEMTGYVVTRW 190 (367)
T ss_dssp EHHHHHHH---CCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEECTTCCEEECCCTTCEECCSSCCSSCSCGG
T ss_pred CHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCC-ccccCcCHHHEEEcCCCCEEEEeeecccccccccCcCcCCCC
Confidence 99999964 57999999999999999999999999 999999999999999999999999999876543 44578999
Q ss_pred CCCcccccc-CCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhh-------------------Hhhhc---cc-
Q 014478 150 FTPPEYMRT-GRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFL-------------------LLMDS---AL- 205 (424)
Q Consensus 150 y~aPE~~~~-~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~-------------------~~~~~---~~- 205 (424)
|+|||++.+ ..++.++|||||||++|||++|+.||........-..... ..... ..
T Consensus 191 y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (367)
T 1cm8_A 191 YRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSDEAKNYMKGLPELEK 270 (367)
T ss_dssp GCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHTCSCHHHHHHHHHSCCCCC
T ss_pred cCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhhhHHHHHHHHhCCCCCC
Confidence 999999987 5789999999999999999999998876422111000000 00000 00
Q ss_pred --CCCCCchhHHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 014478 206 --EGHFSNDEGTELVRLASRCLQSEARERPNAKSLVIS 241 (424)
Q Consensus 206 --~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~~~~~ 241 (424)
........++++.+|+.+||..||.+|||+++++++
T Consensus 271 ~~~~~~~~~~~~~~~~ll~~mL~~dP~~R~t~~e~l~h 308 (367)
T 1cm8_A 271 KDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAH 308 (367)
T ss_dssp CCGGGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred CCHHHHCCCCCHHHHHHHHHHccCChhHCCCHHHHhcC
Confidence 001223457899999999999999999999999875
|
| >3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-41 Score=316.03 Aligned_cols=233 Identities=13% Similarity=0.171 Sum_probs=192.1
Q ss_pred CCCcccceeeee--cceecccccCCCchhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHhHhccC
Q 014478 2 GGRCSKFSICWF--HCHLKSSVLESSDLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHW 79 (424)
Q Consensus 2 G~~g~v~~~~~~--~~~v~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~ 79 (424)
|++|.||.+.+. +..+++|++.... ....+.+|+.+++.++||||+++++++...+..++||||+++++|.+++..
T Consensus 40 G~~g~Vy~~~~~~~~~~vaiK~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~- 117 (314)
T 3com_A 40 GSYGSVYKAIHKETGQIVAIKQVPVES-DLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVMEYCGAGSVSDIIRL- 117 (314)
T ss_dssp ---CEEEEEEETTTCCEEEEEEEETTS-CCHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCTTEEHHHHHHH-
T ss_pred CCCeEEEEEEECCCCCEEEEEecCchH-HHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEeecCCCCCHHHHHHh-
Confidence 899999999884 6778888775543 356789999999999999999999999999999999999999999999863
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCC----CccccCccCCCccc
Q 014478 80 ETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG----KSYSTNLAFTPPEY 155 (424)
Q Consensus 80 ~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~----~~~~gt~~y~aPE~ 155 (424)
....+++.+++.++.|++.||.|||+++ ++||||||+||+++.++.+||+|||++...... ....||+.|+|||.
T Consensus 118 ~~~~~~~~~~~~i~~~i~~~l~~lH~~~-i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~ 196 (314)
T 3com_A 118 RNKTLTEDEIATILQSTLKGLEYLHFMR-KIHRDIKAGNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEV 196 (314)
T ss_dssp HTCCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEECTTCCEEECCCTTCEECBTTBSCBCCCCSCGGGCCHHH
T ss_pred cCCCCCHHHHHHHHHHHHHHHHHHHhCC-CcCCCcCHHHEEECCCCCEEEeecccchhhhhhccccCccCCCCCccChhh
Confidence 2567999999999999999999999999 999999999999999999999999998765432 33468999999999
Q ss_pred cccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhh-hcccCCCCCchhHHHHHHHHHHhcccCcCCCCC
Q 014478 156 MRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLM-DSALEGHFSNDEGTELVRLASRCLQSEARERPN 234 (424)
Q Consensus 156 ~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps 234 (424)
+.+..++.++||||||+++|+|++|..||....... ...... ........+..++.++.++|.+||..||.+|||
T Consensus 197 ~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rpt 272 (314)
T 3com_A 197 IQEIGYNCVADIWSLGITAIEMAEGKPPYADIHPMR----AIFMIPTNPPPTFRKPELWSDNFTDFVKQCLVKSPEQRAT 272 (314)
T ss_dssp HSSSCBCTTHHHHHHHHHHHHHHHSSCTTTTSCHHH----HHHHHHHSCCCCCSSGGGSCHHHHHHHHHHTCSCTTTSCC
T ss_pred cCCCCCCccccHHHHHHHHHHHHhCCCCCCCCChHH----HHHHHhcCCCcccCCcccCCHHHHHHHHHHccCChhhCcC
Confidence 998889999999999999999999998876532111 111111 111112234556889999999999999999999
Q ss_pred HHHHHHH
Q 014478 235 AKSLVIS 241 (424)
Q Consensus 235 ~~~~~~~ 241 (424)
+.+++++
T Consensus 273 ~~~ll~~ 279 (314)
T 3com_A 273 ATQLLQH 279 (314)
T ss_dssp HHHHTTS
T ss_pred HHHHHhC
Confidence 9999875
|
| >2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-41 Score=323.17 Aligned_cols=233 Identities=18% Similarity=0.206 Sum_probs=190.8
Q ss_pred CCCcccceeee--ecceecccccCCCc---------hhhhHHHHHHHHHhcC-CCcCcceeEEEEEeCCeeeEEEecCCC
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESSD---------LGETLNLEEAKAVGNL-RSERLANLIGCCYEADERLLVAEFMPN 69 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~~---------~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~~~~ 69 (424)
|++|.||.+.+ .+..|++|++.... ...+.+.+|+.+++++ +||||+++++++......++||||++|
T Consensus 105 G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~e~~~g 184 (365)
T 2y7j_A 105 GVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSYESSSFMFLVFDLMRK 184 (365)
T ss_dssp CSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEEBSSEEEEEECCCTT
T ss_pred CCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEEEEEeeCCEEEEEEEeCCC
Confidence 89999999988 47788888775432 1145678899999999 899999999999999999999999999
Q ss_pred CCHHhHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCC---Ccccc
Q 014478 70 ETLAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG---KSYST 146 (424)
Q Consensus 70 gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~---~~~~g 146 (424)
++|.+++.. ...+++..+..++.||+.||.|||+.| ++||||||+|||++.++.+||+|||++...... ....|
T Consensus 185 ~~L~~~l~~--~~~l~~~~~~~i~~qi~~~L~~LH~~g-i~H~Dlkp~NIl~~~~~~ikl~DfG~~~~~~~~~~~~~~~g 261 (365)
T 2y7j_A 185 GELFDYLTE--KVALSEKETRSIMRSLLEAVSFLHANN-IVHRDLKPENILLDDNMQIRLSDFGFSCHLEPGEKLRELCG 261 (365)
T ss_dssp CBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEECTTCCEEECCCTTCEECCTTCCBCCCCS
T ss_pred CcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCCHHHEEECCCCCEEEEecCcccccCCCcccccCCC
Confidence 999999964 457999999999999999999999999 999999999999999999999999998876543 34578
Q ss_pred CccCCCcccccc------CCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhcccCCCC--CchhHHHHH
Q 014478 147 NLAFTPPEYMRT------GRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHF--SNDEGTELV 218 (424)
Q Consensus 147 t~~y~aPE~~~~------~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~ 218 (424)
|+.|+|||++.+ ..++.++|||||||++|+|++|..||......... ..+......... ...++.++.
T Consensus 262 t~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~----~~i~~~~~~~~~~~~~~~~~~~~ 337 (365)
T 2y7j_A 262 TPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQILML----RMIMEGQYQFSSPEWDDRSSTVK 337 (365)
T ss_dssp CGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHH----HHHHHTCCCCCHHHHSSSCHHHH
T ss_pred CCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCCCCCHHHHH----HHHHhCCCCCCCcccccCCHHHH
Confidence 999999999863 25788999999999999999999888654221111 111111111110 123567899
Q ss_pred HHHHHhcccCcCCCCCHHHHHHH
Q 014478 219 RLASRCLQSEARERPNAKSLVIS 241 (424)
Q Consensus 219 ~li~~cl~~dp~~Rps~~~~~~~ 241 (424)
++|.+||..||++|||+.+++++
T Consensus 338 ~li~~~L~~dP~~Rps~~ell~h 360 (365)
T 2y7j_A 338 DLISRLLQVDPEARLTAEQALQH 360 (365)
T ss_dssp HHHHHHSCSSTTTSCCHHHHHHS
T ss_pred HHHHHHcCCChhHCcCHHHHhcC
Confidence 99999999999999999999865
|
| >3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-41 Score=337.24 Aligned_cols=234 Identities=15% Similarity=0.137 Sum_probs=190.3
Q ss_pred CCCcccceeee--ecceecccccCCCc--------------hhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEe
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESSD--------------LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAE 65 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~~--------------~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 65 (424)
|+||.||.+.+ .+..+++|++.... ...+.+.+|+.+|++++||||+++++++.++...++|||
T Consensus 47 G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e 126 (504)
T 3q5i_A 47 GAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFDVFEDKKYFYLVTE 126 (504)
T ss_dssp --CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred cCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEEEEe
Confidence 89999999987 45667888775433 234678899999999999999999999999999999999
Q ss_pred cCCCCCHHhHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCC---CeEEccccccccCCCC-
Q 014478 66 FMPNETLAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDG---NPRLSSFGLMKNSRDG- 141 (424)
Q Consensus 66 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~---~~kl~Dfg~~~~~~~~- 141 (424)
|++||+|.+++.. ...+++..++.++.||+.||.|||+++ |+||||||+|||++.++ .+||+|||+++.....
T Consensus 127 ~~~gg~L~~~l~~--~~~~~~~~~~~i~~qi~~~l~~lH~~~-ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~ 203 (504)
T 3q5i_A 127 FYEGGELFEQIIN--RHKFDECDAANIMKQILSGICYLHKHN-IVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDY 203 (504)
T ss_dssp CCTTCBHHHHHHH--HSCCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEESSTTCCSSEEECCCTTCEECCTTS
T ss_pred cCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-eEeCCCcHHHEEEecCCCCccEEEEECCCCEEcCCCC
Confidence 9999999999865 457999999999999999999999999 99999999999998776 6999999999876543
Q ss_pred --CccccCccCCCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhcccCCCC--CchhHHHH
Q 014478 142 --KSYSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHF--SNDEGTEL 217 (424)
Q Consensus 142 --~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l 217 (424)
....||+.|+|||++. +.++.++|||||||++|+|++|..||......... ..+......... ...+++++
T Consensus 204 ~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~----~~i~~~~~~~~~~~~~~~s~~~ 278 (504)
T 3q5i_A 204 KLRDRLGTAYYIAPEVLK-KKYNEKCDVWSCGVIMYILLCGYPPFGGQNDQDII----KKVEKGKYYFDFNDWKNISDEA 278 (504)
T ss_dssp CBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHH----HHHHHCCCCCCHHHHTTSCHHH
T ss_pred ccccccCCcCCCCHHHhc-cCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHH----HHHHcCCCCCCccccCCCCHHH
Confidence 3457899999999987 56899999999999999999999988765322111 111111111110 13457899
Q ss_pred HHHHHHhcccCcCCCCCHHHHHHHHH
Q 014478 218 VRLASRCLQSEARERPNAKSLVISLM 243 (424)
Q Consensus 218 ~~li~~cl~~dp~~Rps~~~~~~~l~ 243 (424)
.+||.+||..||.+|||+++++++-.
T Consensus 279 ~~li~~~L~~dp~~R~t~~e~l~h~~ 304 (504)
T 3q5i_A 279 KELIKLMLTYDYNKRCTAEEALNSRW 304 (504)
T ss_dssp HHHHHHHTCSSTTTSCCHHHHHTSHH
T ss_pred HHHHHHHcCCChhHCCCHHHHhcCHh
Confidence 99999999999999999999997643
|
| >3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-41 Score=329.54 Aligned_cols=232 Identities=13% Similarity=0.130 Sum_probs=180.1
Q ss_pred CCCcccceeee--ecceecccccCCCc---------hhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCC
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESSD---------LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNE 70 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~~---------~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g 70 (424)
|+||.||.+.+ .+..+++|++.... .....+.+|+++|++++||||+++++++.. +..++||||+++|
T Consensus 146 G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~-~~~~lv~e~~~~g 224 (419)
T 3i6u_A 146 GACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDA-EDYYIVLELMEGG 224 (419)
T ss_dssp CSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEES-SEEEEEEECCTTC
T ss_pred CCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEec-CceEEEEEcCCCC
Confidence 89999999987 45678887764332 123468899999999999999999999854 5589999999999
Q ss_pred CHHhHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCC---CCeEEccccccccCCCC---Ccc
Q 014478 71 TLAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKD---GNPRLSSFGLMKNSRDG---KSY 144 (424)
Q Consensus 71 sL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~---~~~kl~Dfg~~~~~~~~---~~~ 144 (424)
+|.+++.. ...+++.++..++.|++.||.|||+++ |+||||||+|||++.+ +.+||+|||+++..... ...
T Consensus 225 ~L~~~l~~--~~~~~~~~~~~i~~qi~~~l~~LH~~~-ivHrDlkp~NIll~~~~~~~~~kl~DFG~a~~~~~~~~~~~~ 301 (419)
T 3i6u_A 225 ELFDKVVG--NKRLKEATCKLYFYQMLLAVQYLHENG-IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTL 301 (419)
T ss_dssp BGGGGTSS--SCCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEESSSSSSCCEEECCSSTTTSCC--------
T ss_pred cHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHHCC-ccccCCChHhEEEecCCCcceEEEeecccceecCCCcccccc
Confidence 99999864 567999999999999999999999999 9999999999999654 45999999999876543 345
Q ss_pred ccCccCCCcccccc---CCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhcccCCCC---CchhHHHHH
Q 014478 145 STNLAFTPPEYMRT---GRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHF---SNDEGTELV 218 (424)
Q Consensus 145 ~gt~~y~aPE~~~~---~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~l~ 218 (424)
.||+.|+|||++.+ ..++.++|||||||++|+|++|..||..... .......+........ ...+++++.
T Consensus 302 ~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~----~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 377 (419)
T 3i6u_A 302 CGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRT----QVSLKDQITSGKYNFIPEVWAEVSEKAL 377 (419)
T ss_dssp ---CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCCSS----SCCHHHHHHTTCCCCCHHHHTTSCHHHH
T ss_pred CCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCcc----hHHHHHHHhcCCCCCCchhhcccCHHHH
Confidence 68999999999863 5678899999999999999999988865311 1111111111111111 123577899
Q ss_pred HHHHHhcccCcCCCCCHHHHHHH
Q 014478 219 RLASRCLQSEARERPNAKSLVIS 241 (424)
Q Consensus 219 ~li~~cl~~dp~~Rps~~~~~~~ 241 (424)
++|.+||+.||++|||+++++++
T Consensus 378 ~li~~~L~~dP~~Rps~~e~l~h 400 (419)
T 3i6u_A 378 DLVKKLLVVDPKARFTTEEALRH 400 (419)
T ss_dssp HHHHHHSCSSTTTSCCHHHHHHS
T ss_pred HHHHHHccCChhHCcCHHHHhCC
Confidence 99999999999999999999976
|
| >1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=5.7e-42 Score=325.87 Aligned_cols=236 Identities=18% Similarity=0.217 Sum_probs=192.6
Q ss_pred CCCcccceeee-----ecceecccccCCCc-----hhhhHHHHHHHHHhcC-CCcCcceeEEEEEeCCeeeEEEecCCCC
Q 014478 2 GGRCSKFSICW-----FHCHLKSSVLESSD-----LGETLNLEEAKAVGNL-RSERLANLIGCCYEADERLLVAEFMPNE 70 (424)
Q Consensus 2 G~~g~v~~~~~-----~~~~v~~~~~~~~~-----~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~~~~g 70 (424)
|+||.||.+.+ .+..+++|++.... .....+.+|+++++.+ +||||+++++++......++||||+++|
T Consensus 65 G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~~ 144 (355)
T 1vzo_A 65 GAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTETKLHLILDYINGG 144 (355)
T ss_dssp TTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETTEEEEEECCCCSC
T ss_pred CCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeCceEEEEeecCCCC
Confidence 89999999987 56778888875432 2346678899999999 7999999999999999999999999999
Q ss_pred CHHhHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCC-----Cccc
Q 014478 71 TLAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG-----KSYS 145 (424)
Q Consensus 71 sL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~-----~~~~ 145 (424)
+|.+++.. ...+++..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++..... ....
T Consensus 145 ~L~~~l~~--~~~~~~~~~~~~~~qi~~aL~~LH~~~-ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~~~~ 221 (355)
T 1vzo_A 145 ELFTHLSQ--RERFTEHEVQIYVGEIVLALEHLHKLG-IIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETERAYDFC 221 (355)
T ss_dssp BHHHHHHH--HSCCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEECTTSCEEESCSSEEEECCGGGGGGGCGGG
T ss_pred CHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCCHHHEEECCCCcEEEeeCCCCeecccCCCCcccCcc
Confidence 99999965 457999999999999999999999999 999999999999999999999999999865422 2346
Q ss_pred cCccCCCccccccC--CCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHHHHHHHHH
Q 014478 146 TNLAFTPPEYMRTG--RVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASR 223 (424)
Q Consensus 146 gt~~y~aPE~~~~~--~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 223 (424)
||+.|+|||++.++ .++.++|||||||++|||++|..||................. ......+..++..+.+||.+
T Consensus 222 gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~li~~ 299 (355)
T 1vzo_A 222 GTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRIL--KSEPPYPQEMSALAKDLIQR 299 (355)
T ss_dssp SCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCCHHHHHHHHH--HCCCCCCTTSCHHHHHHHHH
T ss_pred cCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCccCCccchHHHHHHHHh--ccCCCCCcccCHHHHHHHHH
Confidence 89999999999863 478899999999999999999988864311111111111111 12234566778899999999
Q ss_pred hcccCcCCCC-----CHHHHHHHH
Q 014478 224 CLQSEARERP-----NAKSLVISL 242 (424)
Q Consensus 224 cl~~dp~~Rp-----s~~~~~~~l 242 (424)
||..||.+|| |+++++++.
T Consensus 300 ~L~~dP~~R~~~~~~s~~ell~h~ 323 (355)
T 1vzo_A 300 LLMKDPKKRLGCGPRDADEIKEHL 323 (355)
T ss_dssp HTCSSGGGSTTSSTTTHHHHHTSG
T ss_pred HhhhCHHHhcCCCCCCHHHHHcCc
Confidence 9999999999 999998764
|
| >2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.9e-42 Score=321.64 Aligned_cols=239 Identities=18% Similarity=0.246 Sum_probs=189.2
Q ss_pred CCCcccceeeeecceecccccCCC---chhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHhHhcc
Q 014478 2 GGRCSKFSICWFHCHLKSSVLESS---DLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFH 78 (424)
Q Consensus 2 G~~g~v~~~~~~~~~v~~~~~~~~---~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~ 78 (424)
|++|.||.+.+.+ .+++|++... ....+.+.+|+.++++++||||+++++++......++||||++|++|.+++..
T Consensus 44 G~~g~V~~~~~~~-~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~iv~e~~~~~~L~~~l~~ 122 (319)
T 2y4i_B 44 GRFGQVYHGRWHG-EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPPHLAIITSLCKGRTLYSVVRD 122 (319)
T ss_dssp SSSSEEEEEEESS-SEEEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTBCCCCEEEECSSCEEEECBCCCSEEHHHHTTS
T ss_pred CCceEEEEEEEcC-eEEEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCceEEEeecccCCcHHHHHHh
Confidence 8999999998865 4666666433 23346788999999999999999999999999999999999999999999965
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCC---------CCccccCcc
Q 014478 79 WETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRD---------GKSYSTNLA 149 (424)
Q Consensus 79 ~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~---------~~~~~gt~~ 149 (424)
.+..+++.+++.++.||+.||.|||+++ ++||||||+||+++ ++.+||+|||+++.... .....||+.
T Consensus 123 -~~~~~~~~~~~~i~~qi~~al~~lH~~~-i~H~dlkp~NIl~~-~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~~g~~~ 199 (319)
T 2y4i_B 123 -AKIVLDVNKTRQIAQEIVKGMGYLHAKG-ILHKDLKSKNVFYD-NGKVVITDFGLFSISGVLQAGRREDKLRIQNGWLC 199 (319)
T ss_dssp -SCCCCCSHHHHHHHHHHHHHHHHHHHTT-CCCCCCCSTTEEEC---CCEECCCSCCC----------CCSCBCCSGGGG
T ss_pred -cCCCCCHHHHHHHHHHHHHHHHHHHhCC-ccccCCChhhEEEe-CCCEEEeecCCccccccccccccccccccCCCccc
Confidence 3457999999999999999999999999 99999999999998 78999999999765431 123358899
Q ss_pred CCCcccccc---------CCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHHHHHH
Q 014478 150 FTPPEYMRT---------GRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRL 220 (424)
Q Consensus 150 y~aPE~~~~---------~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 220 (424)
|+|||.+.+ ..++.++|||||||++|+|++|..||......... ............+..++.++.++
T Consensus 200 y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~l~~l 275 (319)
T 2y4i_B 200 HLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAEAII----WQMGTGMKPNLSQIGMGKEISDI 275 (319)
T ss_dssp TSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSSCCHHHHH----HHHHTTCCCCCCCSSCCTTHHHH
T ss_pred ccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHH----HHhccCCCCCCCcCCCCHHHHHH
Confidence 999999874 34788999999999999999999888764322111 11111122222233567789999
Q ss_pred HHHhcccCcCCCCCHHHHHHHHHHHhhh
Q 014478 221 ASRCLQSEARERPNAKSLVISLMSLQKE 248 (424)
Q Consensus 221 i~~cl~~dp~~Rps~~~~~~~l~~~~~~ 248 (424)
+.+||..||++|||+.++++.|+.+.+.
T Consensus 276 i~~~l~~~p~~Rpt~~~l~~~l~~l~~~ 303 (319)
T 2y4i_B 276 LLFCWAFEQEERPTFTKLMDMLEKLPKR 303 (319)
T ss_dssp HHHHHCSSTTTSCCHHHHHHHHTTC---
T ss_pred HHHHhcCChhhCcCHHHHHHHHHHHHHh
Confidence 9999999999999999999999988765
|
| >1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-41 Score=320.91 Aligned_cols=237 Identities=17% Similarity=0.151 Sum_probs=187.4
Q ss_pred CCCcccceeee--ecceecccccCCCch------hhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHH
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESSDL------GETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLA 73 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~~~------~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~ 73 (424)
|++|.||.+.+ .+..+++|++..... ....+.+|+++++.++||||+++++++...+..++||||+++ +|.
T Consensus 21 G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~-~l~ 99 (346)
T 1ua2_A 21 GQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNISLVFDFMET-DLE 99 (346)
T ss_dssp ETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTCCEEEEECCSE-EHH
T ss_pred cCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEeeCCceEEEEEcCCC-CHH
Confidence 89999999988 467788888754321 134688999999999999999999999999999999999986 899
Q ss_pred hHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCC----CccccCcc
Q 014478 74 KHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG----KSYSTNLA 149 (424)
Q Consensus 74 ~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~----~~~~gt~~ 149 (424)
+++.. ....+++.++..++.|++.||.|||+++ |+||||||+|||++.++.+||+|||+++..... ....||+.
T Consensus 100 ~~~~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~~-ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~t~~ 177 (346)
T 1ua2_A 100 VIIKD-NSLVLTPSHIKAYMLMTLQGLEYLHQHW-ILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYTHQVVTRW 177 (346)
T ss_dssp HHHTT-CCSSCCSSHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEECTTCCEEECCCGGGSTTTSCCCCCCCSCCCCT
T ss_pred HHHHh-cCcCCCHHHHHHHHHHHHHHHHHHHHCC-EECCCCCHHHEEEcCCCCEEEEecccceeccCCcccCCccccccc
Confidence 98865 3457899999999999999999999999 999999999999999999999999999865432 34568999
Q ss_pred CCCccccccC-CCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhccc---C--------------CCC--
Q 014478 150 FTPPEYMRTG-RVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSAL---E--------------GHF-- 209 (424)
Q Consensus 150 y~aPE~~~~~-~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~---~--------------~~~-- 209 (424)
|+|||++.+. .++.++|||||||++|+|++|..||........-.........+.. . ...
T Consensus 178 y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (346)
T 1ua2_A 178 YRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLPDYVTFKSFPGIPL 257 (346)
T ss_dssp TCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSSSTTSSTTCCCCCCCCCCCH
T ss_pred ccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHcCCCChhhhhhhccCcccccccccCCCCh
Confidence 9999999764 4789999999999999999999887764322111111111000000 0 000
Q ss_pred ---CchhHHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 014478 210 ---SNDEGTELVRLASRCLQSEARERPNAKSLVIS 241 (424)
Q Consensus 210 ---~~~~~~~l~~li~~cl~~dp~~Rps~~~~~~~ 241 (424)
...++.++.+||.+||..||++|||+.+++++
T Consensus 258 ~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 292 (346)
T 1ua2_A 258 HHIFSAAGDDLLDLIQGLFLFNPCARITATQALKM 292 (346)
T ss_dssp HHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTS
T ss_pred HHhhccCCHHHHHHHHHHhccChhhCCCHHHHhcC
Confidence 13456889999999999999999999999865
|
| >3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-41 Score=313.81 Aligned_cols=244 Identities=14% Similarity=0.122 Sum_probs=194.0
Q ss_pred CCCcccceeee--ecceecccccCCCchhhhHHHHHHHHHhcCCCcCcceeEEEE-EeCCeeeEEEecCCCCCHHhHhcc
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESSDLGETLNLEEAKAVGNLRSERLANLIGCC-YEADERLLVAEFMPNETLAKHLFH 78 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-~~~~~~~lv~e~~~~gsL~~~l~~ 78 (424)
|++|.||.+.+ .+..+++|++.... ....+.+|+.+++.++|++++..++.+ ..+...++||||+ +++|.+++..
T Consensus 20 G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~ 97 (296)
T 3uzp_A 20 GSFGDIYLGTDIAAGEEVAIKLECVKT-KHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMELL-GPSLEDLFNF 97 (296)
T ss_dssp ETTEEEEEEEETTTTEEEEEEEEESCS-SCCHHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEECC-CCBHHHHHHH
T ss_pred CCCeEEEEEEEcCCCcEEEEEEecCCc-chhHHHHHHHHHHHhhcCCCCCccccccCCCCceEEEEEec-CCCHHHHHHh
Confidence 78999999985 67778888765443 345688999999999988866666555 5667789999999 8999999964
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeee---cCCCCeEEccccccccCCCC-----------Ccc
Q 014478 79 WETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILF---DKDGNPRLSSFGLMKNSRDG-----------KSY 144 (424)
Q Consensus 79 ~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill---~~~~~~kl~Dfg~~~~~~~~-----------~~~ 144 (424)
....+++.+++.++.|++.||.|||+++ ++||||||+|||+ +.++.+||+|||+++..... ...
T Consensus 98 -~~~~~~~~~~~~i~~qi~~~l~~lH~~~-ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~ 175 (296)
T 3uzp_A 98 -CSRKFSLKTVLLLADQMISRIEYIHSKN-FIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNL 175 (296)
T ss_dssp -TTTCCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCCGGGEEECCGGGTTCEEECCCTTCEECBCTTTCCBCCCCCSCCC
T ss_pred -hccCCCHHHHHHHHHHHHHHHHHHHhCC-eeeCCCCHHHeEEecCCCCCeEEEeeCCCccccccccccccccccccccc
Confidence 3467999999999999999999999999 9999999999999 47889999999998865432 344
Q ss_pred ccCccCCCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhcccC---CCCCchhHHHHHHHH
Q 014478 145 STNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALE---GHFSNDEGTELVRLA 221 (424)
Q Consensus 145 ~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~l~~li 221 (424)
.||+.|+|||++.+..++.++|||||||++|+|++|+.||...... ............... ...+..+++++.+++
T Consensus 176 ~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 254 (296)
T 3uzp_A 176 TGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAA-TKRQKYERISEKKMSTPIEVLCKGYPSEFATYL 254 (296)
T ss_dssp CSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCS-SSSSHHHHHHHHHHHSCHHHHTTTSCHHHHHHH
T ss_pred ccccccCChhhhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCcCch-hhhhhhhhhcccccCCchHHHHhhCCHHHHHHH
Confidence 6899999999999889999999999999999999999888752110 000001111111111 111244578899999
Q ss_pred HHhcccCcCCCCCHHHHHHHHHHHhhhhh
Q 014478 222 SRCLQSEARERPNAKSLVISLMSLQKEAE 250 (424)
Q Consensus 222 ~~cl~~dp~~Rps~~~~~~~l~~~~~~~~ 250 (424)
.+||+.||++|||+.++++.|+.+.....
T Consensus 255 ~~~l~~dp~~Rps~~~l~~~l~~~~~~~~ 283 (296)
T 3uzp_A 255 NFCRSLRFDDKPDYSYLRQLFRNLFHRQG 283 (296)
T ss_dssp HHHHTSCTTCCCCHHHHHHHHHHHHHHTT
T ss_pred HHHHhcCcCcCCCHHHHHHHHHHHHHhcC
Confidence 99999999999999999999999887644
|
| >2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-41 Score=322.36 Aligned_cols=236 Identities=18% Similarity=0.148 Sum_probs=193.4
Q ss_pred CCCcccceeeeecceecccccCCCchh------------------hhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEE
Q 014478 2 GGRCSKFSICWFHCHLKSSVLESSDLG------------------ETLNLEEAKAVGNLRSERLANLIGCCYEADERLLV 63 (424)
Q Consensus 2 G~~g~v~~~~~~~~~v~~~~~~~~~~~------------------~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 63 (424)
|++|.||.+.+.+..+++|++...... .+.+.+|+.++++++||||+++++++.+.+..++|
T Consensus 42 G~~g~V~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv 121 (348)
T 2pml_X 42 GKFNKIILCEKDNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTCEGIITNYDEVYII 121 (348)
T ss_dssp CSSCCEEEEEETTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCCCSEEEESSSEEEEE
T ss_pred CCCeEEEEEEcCCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcceEEEEEeeCCeEEEE
Confidence 899999999998888888887543321 17899999999999999999999999999999999
Q ss_pred EecCCCCCHHhH------hccCCCCCCCHHHHHHHHHHHHHHHHHHHh-CCCcccccCCCCCeeecCCCCeEEccccccc
Q 014478 64 AEFMPNETLAKH------LFHWETQPMKWAMRLRVALYLAQALEYCSS-KGRALYHDLNAYRILFDKDGNPRLSSFGLMK 136 (424)
Q Consensus 64 ~e~~~~gsL~~~------l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~-~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~ 136 (424)
|||+++|+|.++ +.......+++..++.++.|++.||.|||+ ++ ++||||||+||+++.++.+||+|||++.
T Consensus 122 ~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~-i~H~dl~p~Nil~~~~~~~kl~dfg~~~ 200 (348)
T 2pml_X 122 YEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNEKN-ICHRDVKPSNILMDKNGRVKLSDFGESE 200 (348)
T ss_dssp EECCTTCBSSEESSSEESSCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTSC-EECCCCCGGGEEECTTSCEEECCCTTCE
T ss_pred EeccCCCcHHHHHHHhhhhhhccccCCCHHHHHHHHHHHHHHHHHHhccCC-EeecCCChHhEEEcCCCcEEEecccccc
Confidence 999999999998 654336789999999999999999999999 89 9999999999999999999999999998
Q ss_pred cCCCC--CccccCccCCCccccccC-CCCC-CcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhcccCCC----
Q 014478 137 NSRDG--KSYSTNLAFTPPEYMRTG-RVTP-ESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGH---- 208 (424)
Q Consensus 137 ~~~~~--~~~~gt~~y~aPE~~~~~-~~~~-~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 208 (424)
..... ....||..|+|||++.+. .++. ++|||||||++|+|++|..||...... ......+........
T Consensus 201 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~---~~~~~~i~~~~~~~~~~~~ 277 (348)
T 2pml_X 201 YMVDKKIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISL---VELFNNIRTKNIEYPLDRN 277 (348)
T ss_dssp ECBTTEECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHHHSSCSSCCSSCS---HHHHHHHTSCCCCCCCSSS
T ss_pred ccccccccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCCcH---HHHHHHHhccCcCCccchh
Confidence 75433 345789999999999877 5666 999999999999999999888754210 001111111111100
Q ss_pred -------------CCchhHHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 014478 209 -------------FSNDEGTELVRLASRCLQSEARERPNAKSLVIS 241 (424)
Q Consensus 209 -------------~~~~~~~~l~~li~~cl~~dp~~Rps~~~~~~~ 241 (424)
....+++++.++|.+||+.||.+|||+.+++++
T Consensus 278 ~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~e~l~h 323 (348)
T 2pml_X 278 HFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALKH 323 (348)
T ss_dssp SSTTTTCC--------CCCHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred hhhccccccccccchhhcCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 014567899999999999999999999999864
|
| >1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.8e-41 Score=312.88 Aligned_cols=234 Identities=16% Similarity=0.211 Sum_probs=186.4
Q ss_pred CCCcccceeee--ecceecccccCCCchhhhHHHHHHHHHhcCCCcCcceeEEEEEe-------------CCeeeEEEec
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESSDLGETLNLEEAKAVGNLRSERLANLIGCCYE-------------ADERLLVAEF 66 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-------------~~~~~lv~e~ 66 (424)
|++|.||.+.+ .+..+++|++.......+.+.+|+.++++++||||+++++++.+ ....++||||
T Consensus 17 G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~ 96 (303)
T 1zy4_A 17 GAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEY 96 (303)
T ss_dssp CSSEEEEEEEETTTCCEEEEEEEEEEHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC------CEEEEEEEEEC
T ss_pred CCcEEEEEEEEcCCCeEEEEEEEeccHHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhhhcccccCCceEEEEec
Confidence 89999999987 57778888887666667889999999999999999999999865 3457899999
Q ss_pred CCCCCHHhHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCC-----
Q 014478 67 MPNETLAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG----- 141 (424)
Q Consensus 67 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~----- 141 (424)
+++|+|.+++.. ....+++..++.++.|++.||.|||+++ ++||||||+||+++.++.+||+|||+++.....
T Consensus 97 ~~~~~L~~~l~~-~~~~~~~~~~~~i~~qi~~~l~~LH~~~-i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~ 174 (303)
T 1zy4_A 97 CENGTLYDLIHS-ENLNQQRDEYWRLFRQILEALSYIHSQG-IIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILK 174 (303)
T ss_dssp CCSCBHHHHHHH-SCGGGCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEECTTSCEEECCCCCCSCTTC------
T ss_pred CCCCCHHHhhhc-cccccchHHHHHHHHHHHHHHHHHHhCC-eecccCCHHhEEEcCCCCEEEeeCcchhhcccccchhc
Confidence 999999999975 3456889999999999999999999999 999999999999999999999999998765421
Q ss_pred -------------CccccCccCCCccccccC-CCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhcccCC
Q 014478 142 -------------KSYSTNLAFTPPEYMRTG-RVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEG 207 (424)
Q Consensus 142 -------------~~~~gt~~y~aPE~~~~~-~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (424)
....||+.|+|||++.+. .++.++|||||||++|+|++ |+...... ..............+.
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~---p~~~~~~~-~~~~~~~~~~~~~~~~ 250 (303)
T 1zy4_A 175 LDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFSTGMER-VNILKKLRSVSIEFPP 250 (303)
T ss_dssp -------------------CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHS---CCSSHHHH-HHHHHHHHSTTCCCCT
T ss_pred cccccccccccccccCCCcccccCcccccCCCCCcchhhHHHHHHHHHHHHh---ccCCchhH-HHHHHhccccccccCc
Confidence 234578999999999864 68999999999999999998 34322111 1111111111222334
Q ss_pred CCCchhHHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 014478 208 HFSNDEGTELVRLASRCLQSEARERPNAKSLVIS 241 (424)
Q Consensus 208 ~~~~~~~~~l~~li~~cl~~dp~~Rps~~~~~~~ 241 (424)
..+...+..+.++|.+||+.||.+|||+.+++++
T Consensus 251 ~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h 284 (303)
T 1zy4_A 251 DFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLNS 284 (303)
T ss_dssp TCCTTTSHHHHHHHHHHTCSSGGGSCCHHHHHHS
T ss_pred cccccchHHHHHHHHHHHhcCcccCcCHHHHhCC
Confidence 4556677889999999999999999999999865
|
| >3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-42 Score=331.38 Aligned_cols=237 Identities=13% Similarity=0.023 Sum_probs=174.8
Q ss_pred CCCcccceeee--ecceecccccCCCc----hhhhHHHHHHHHHhcC--CCcCcceeE-------EEEEeCC--------
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESSD----LGETLNLEEAKAVGNL--RSERLANLI-------GCCYEAD-------- 58 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~~----~~~~~~~~E~~~l~~l--~h~~iv~~~-------~~~~~~~-------- 58 (424)
|+||.||.+.+ .+..+++|++.... ...+.+.+|+.+++.| +||||++++ +++....
T Consensus 73 G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~hp~iv~~~~~~~~p~d~~~~~~~~~~~~~~ 152 (371)
T 3q60_A 73 GDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGESPEEARDRRRLLLPSDAVAVQSQPPFAQLS 152 (371)
T ss_dssp CSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC----------CBCCCCEEEEETTSCSSSBCS
T ss_pred CCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcccChhhhhhceeEEeeehheecCCCCCeeecc
Confidence 89999999997 46778888886643 3456677885444444 699987754 5554432
Q ss_pred ---------eeeEEEecCCCCCHHhHhccCCCCCCCHHHH------HHHHHHHHHHHHHHHhCCCcccccCCCCCeeecC
Q 014478 59 ---------ERLLVAEFMPNETLAKHLFHWETQPMKWAMR------LRVALYLAQALEYCSSKGRALYHDLNAYRILFDK 123 (424)
Q Consensus 59 ---------~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~------~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~ 123 (424)
..+|||||++ |+|.+++... +..+++..+ +.++.||+.||.|||+++ |+||||||+|||++.
T Consensus 153 ~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~-~~~~~~~~~~~~~vk~~i~~qi~~aL~~LH~~~-ivHrDikp~NIll~~ 229 (371)
T 3q60_A 153 PGQDDYAVANYLLLMPAAS-VDLELLFSTL-DFVYVFRGDEGILALHILTAQLIRLAANLQSKG-LVHGHFTPDNLFIMP 229 (371)
T ss_dssp CC---CCEEEEEEEECCCS-EEHHHHHHHH-HHSCCCCHHHHHHHHHHHHHHHHHHHHHHHHTT-EEETTCSGGGEEECT
T ss_pred CCcccceeeeEEEEecCCC-CCHHHHHHHh-ccccchhhhhhhhhHHHHHHHHHHHHHHHHHCC-CccCcCCHHHEEECC
Confidence 3799999998 7999999652 234455555 678899999999999999 999999999999999
Q ss_pred CCCeEEccccccccCCCCC-ccccCccCCCcccccc--CCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhh---h
Q 014478 124 DGNPRLSSFGLMKNSRDGK-SYSTNLAFTPPEYMRT--GRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKN---F 197 (424)
Q Consensus 124 ~~~~kl~Dfg~~~~~~~~~-~~~gt~~y~aPE~~~~--~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~---~ 197 (424)
++.+||+|||+++...... ...+|+.|+|||++.+ ..++.++|||||||++|||++|+.||............ .
T Consensus 230 ~~~~kL~DFG~a~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~~~~~~~ 309 (371)
T 3q60_A 230 DGRLMLGDVSALWKVGTRGPASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCLFLPFGLVTPGIKGSWKRPSL 309 (371)
T ss_dssp TSCEEECCGGGEEETTCEEEGGGSCGGGCCHHHHTCSEEECCHHHHHHHHHHHHHHHHHSSCSTTBCCTTCTTCCCBCCT
T ss_pred CCCEEEEecceeeecCCCccCccCCcCCcChhhccCCCCCcCccccHHHHHHHHHHHHhCCCCCCCcCcccccchhhhhh
Confidence 9999999999999876554 5567899999999987 67899999999999999999999888764211111000 0
Q ss_pred hHhhhcccCCCCCchhHHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 014478 198 LLLMDSALEGHFSNDEGTELVRLASRCLQSEARERPNAKSLVIS 241 (424)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~~~~~ 241 (424)
...............+++++.+||.+||+.||++|||+.+++++
T Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 353 (371)
T 3q60_A 310 RVPGTDSLAFGSCTPLPDFVKTLIGRFLNFDRRRRLLPLEAMET 353 (371)
T ss_dssp TSCCCCSCCCTTSSCCCHHHHHHHHHHTCSSTTTCCCHHHHTTS
T ss_pred hhccccccchhhccCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 11111112222234678899999999999999999999999874
|
| >4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-41 Score=320.45 Aligned_cols=237 Identities=17% Similarity=0.284 Sum_probs=187.5
Q ss_pred CCCcccceeeee--cceecccccCCCc---hhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHhHh
Q 014478 2 GGRCSKFSICWF--HCHLKSSVLESSD---LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHL 76 (424)
Q Consensus 2 G~~g~v~~~~~~--~~~v~~~~~~~~~---~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~l 76 (424)
|++|.||.+.+. +..|++|++.... ...+.+.+|++++++++||||+++++++...+..++||||+++++|.+++
T Consensus 36 G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~l~~~~ 115 (331)
T 4aaa_A 36 GSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLVFEFVDHTILDDLE 115 (331)
T ss_dssp GTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCSEEHHHHHH
T ss_pred cCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEeeEEEEeecCCEEEEEEecCCcchHHHHH
Confidence 899999999884 6778888774333 23566889999999999999999999999999999999999999999887
Q ss_pred ccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCC----CccccCccCCC
Q 014478 77 FHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG----KSYSTNLAFTP 152 (424)
Q Consensus 77 ~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~----~~~~gt~~y~a 152 (424)
.. ...+++..+..++.|++.||.|||+++ ++||||||+|||++.++.+||+|||+++..... ....||+.|+|
T Consensus 116 ~~--~~~~~~~~~~~~~~qi~~~l~~LH~~~-ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~t~~y~a 192 (331)
T 4aaa_A 116 LF--PNGLDYQVVQKYLFQIINGIGFCHSHN-IIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYDDEVATRWYRA 192 (331)
T ss_dssp HS--TTCCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEECTTSCEEECCCTTC------------CCCCCTTCC
T ss_pred hh--ccCCCHHHHHHHHHHHHHHHHHHHHCC-EEccCcChheEEEcCCCcEEEEeCCCceeecCCccccCCCcCCccccC
Confidence 53 457999999999999999999999999 999999999999999999999999999765432 34568999999
Q ss_pred ccccccC-CCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhH----------h------hhc----ccCCC---
Q 014478 153 PEYMRTG-RVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLL----------L------MDS----ALEGH--- 208 (424)
Q Consensus 153 PE~~~~~-~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~----------~------~~~----~~~~~--- 208 (424)
||++.+. .++.++|||||||++|+|++|..||............... . ... .....
T Consensus 193 PE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (331)
T 4aaa_A 193 PELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQELFNKNPVFAGVRLPEIKEREPL 272 (331)
T ss_dssp HHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHHCGGGTTCCCCCCSSCCCH
T ss_pred cccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhhhHhhhccccccccCccccccchh
Confidence 9999875 6899999999999999999999888765322111100000 0 000 00000
Q ss_pred --CCchhHHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 014478 209 --FSNDEGTELVRLASRCLQSEARERPNAKSLVIS 241 (424)
Q Consensus 209 --~~~~~~~~l~~li~~cl~~dp~~Rps~~~~~~~ 241 (424)
....+++++.+||.+||+.||++|||+.+++++
T Consensus 273 ~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~h 307 (331)
T 4aaa_A 273 ERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLHH 307 (331)
T ss_dssp HHHSTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGS
T ss_pred hhcccchhHHHHHHHHHHhccCcccCCCHHHHhcC
Confidence 012457889999999999999999999999976
|
| >2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-41 Score=315.37 Aligned_cols=234 Identities=16% Similarity=0.201 Sum_probs=187.8
Q ss_pred CCCcccceeeee--cceecccccCCCc-hhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHhHhcc
Q 014478 2 GGRCSKFSICWF--HCHLKSSVLESSD-LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFH 78 (424)
Q Consensus 2 G~~g~v~~~~~~--~~~v~~~~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~ 78 (424)
|++|.||.+.+. +..+++|++.... ...+.+.+|++++..++||||+++++++..++..++||||+++++|.+++..
T Consensus 30 G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~ 109 (302)
T 2j7t_A 30 GAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLE 109 (302)
T ss_dssp STTCCEEEEEETTTCCEEEEEEEC----CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC-CEEEEEECCTTEEHHHHHHH
T ss_pred CCCeEEEEEEEcCCCcEEEEEEecCCCHHHHHHHHHHHHHHhcCCCCCEeeeeeeeeeCCeEEEEEEeCCCCcHHHHHHh
Confidence 899999999984 6677777775443 3467889999999999999999999999999999999999999999998864
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCC----CCCccccCccCCCcc
Q 014478 79 WETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSR----DGKSYSTNLAFTPPE 154 (424)
Q Consensus 79 ~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~----~~~~~~gt~~y~aPE 154 (424)
....+++..++.++.|++.||.|||+++ ++||||||+||+++.++.+||+|||++.... ......||+.|+|||
T Consensus 110 -~~~~~~~~~~~~~~~~i~~~l~~lH~~~-i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE 187 (302)
T 2j7t_A 110 -LDRGLTEPQIQVVCRQMLEALNFLHSKR-IIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFIGTPYWMAPE 187 (302)
T ss_dssp -HTSCCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCSGGGEEECTTSCEEECCCHHHHHHHHHHHC-----CCGGGCCHH
T ss_pred -hccCCCHHHHHHHHHHHHHHHHHHhcCC-cccCCCCHHHEEECCCCCEEEEECCCCccccccccccccccCChhhcCCe
Confidence 2457999999999999999999999999 9999999999999999999999999875322 233457899999999
Q ss_pred ccc-----cCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhcc-cCCCCCchhHHHHHHHHHHhcccC
Q 014478 155 YMR-----TGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSA-LEGHFSNDEGTELVRLASRCLQSE 228 (424)
Q Consensus 155 ~~~-----~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~li~~cl~~d 228 (424)
++. +..++.++||||||+++|+|++|..|+........ ........ .....+..++.++.++|.+||..|
T Consensus 188 ~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~d 263 (302)
T 2j7t_A 188 VVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRV----LLKIAKSDPPTLLTPSKWSVEFRDFLKIALDKN 263 (302)
T ss_dssp HHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTSCHHHH----HHHHHHSCCCCCSSGGGSCHHHHHHHHHHSCSC
T ss_pred eeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccCCHHHH----HHHHhccCCcccCCccccCHHHHHHHHHHcccC
Confidence 984 56788999999999999999999988765321111 11111111 112234567889999999999999
Q ss_pred cCCCCCHHHHHHH
Q 014478 229 ARERPNAKSLVIS 241 (424)
Q Consensus 229 p~~Rps~~~~~~~ 241 (424)
|++|||+.+++++
T Consensus 264 p~~Rps~~~ll~h 276 (302)
T 2j7t_A 264 PETRPSAAQLLEH 276 (302)
T ss_dssp TTTSCCHHHHTTS
T ss_pred hhhCCCHHHHhcC
Confidence 9999999999754
|
| >2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.6e-41 Score=311.12 Aligned_cols=234 Identities=18% Similarity=0.197 Sum_probs=189.4
Q ss_pred CCCcccceeee--ecceecccccCCCc-----hhhhHHHHHHHHHhcCCCcCcceeEEEEE--eCCeeeEEEecCCCCCH
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESSD-----LGETLNLEEAKAVGNLRSERLANLIGCCY--EADERLLVAEFMPNETL 72 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~~-----~~~~~~~~E~~~l~~l~h~~iv~~~~~~~--~~~~~~lv~e~~~~gsL 72 (424)
|++|.||.+.+ .+..+++|++.... .....+.+|+++++.++||||+++++++. .....++||||++++ |
T Consensus 16 G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~~~~~-l 94 (305)
T 2wtk_C 16 GSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKMYMVMEYCVCG-M 94 (305)
T ss_dssp CSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC---CEEEEEECCSEE-H
T ss_pred CCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCCCeEEEEehhccCC-H
Confidence 89999999987 45667777775432 34578899999999999999999999984 445789999999876 7
Q ss_pred HhHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCC------Ccccc
Q 014478 73 AKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG------KSYST 146 (424)
Q Consensus 73 ~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~------~~~~g 146 (424)
.+++.......+++..++.++.|++.||.|||+++ ++||||||+||+++.++.+||+|||++...... ....|
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~-i~H~dlkp~NIl~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~ 173 (305)
T 2wtk_C 95 QEMLDSVPEKRFPVCQAHGYFCQLIDGLEYLHSQG-IVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAADDTCRTSQG 173 (305)
T ss_dssp HHHHHHSTTCSCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEECTTCCEEECCCTTCEECCTTCSSCEECCCCS
T ss_pred HHHHHhCcccccCHHHHHHHHHHHHHHHHHHHHCC-eeecCCCcccEEEcCCCcEEeeccccccccCccccccccccCCC
Confidence 77776555678999999999999999999999999 999999999999999999999999999865422 23468
Q ss_pred CccCCCccccccCC--CCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHHHHHHHHHh
Q 014478 147 NLAFTPPEYMRTGR--VTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRC 224 (424)
Q Consensus 147 t~~y~aPE~~~~~~--~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c 224 (424)
|+.|+|||++.+.. .+.++||||||+++|+|++|..||......... ..+... ....+..+++++.++|.+|
T Consensus 174 ~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~----~~i~~~--~~~~~~~~~~~l~~li~~~ 247 (305)
T 2wtk_C 174 SPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNIYKLF----ENIGKG--SYAIPGDCGPPLSDLLKGM 247 (305)
T ss_dssp CGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHH----HHHHHC--CCCCCSSSCHHHHHHHHHH
T ss_pred CCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCCchHHHHH----HHHhcC--CCCCCCccCHHHHHHHHHH
Confidence 99999999998644 477999999999999999999888764222111 111111 2234566788999999999
Q ss_pred cccCcCCCCCHHHHHHHHH
Q 014478 225 LQSEARERPNAKSLVISLM 243 (424)
Q Consensus 225 l~~dp~~Rps~~~~~~~l~ 243 (424)
|..||.+|||+++++++-.
T Consensus 248 l~~dp~~Rps~~~ll~~~~ 266 (305)
T 2wtk_C 248 LEYEPAKRFSIRQIRQHSW 266 (305)
T ss_dssp TCSSTTTSCCHHHHHHSHH
T ss_pred ccCChhhCCCHHHHhcCcc
Confidence 9999999999999997643
|
| >4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-41 Score=313.12 Aligned_cols=244 Identities=14% Similarity=0.114 Sum_probs=193.1
Q ss_pred CCCcccceeee--ecceecccccCCCchhhhHHHHHHHHHhcCCCcCcceeEEEE-EeCCeeeEEEecCCCCCHHhHhcc
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESSDLGETLNLEEAKAVGNLRSERLANLIGCC-YEADERLLVAEFMPNETLAKHLFH 78 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-~~~~~~~lv~e~~~~gsL~~~l~~ 78 (424)
|++|.||.+.+ .+..+++|++.... ....+.+|+++++.++|++++..++.+ ..++..++||||+ +++|.+++..
T Consensus 20 G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~ 97 (296)
T 4hgt_A 20 GSFGDIYLGTDIAAGEEVAIKLECVKT-KHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMELL-GPSLEDLFNF 97 (296)
T ss_dssp CSSSEEEEEEETTTTEEEEEEEEEC----CCCHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEECC-CCBHHHHHHH
T ss_pred CCCeEEEEEEEcCCCceEEEEeecccc-cchHHHHHHHHHHHhcCCCCCCeeeeecCCCCceEEEEEcc-CCCHHHHHHH
Confidence 89999999985 66778877654433 335688999999999988877766665 5677789999999 8999999864
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeee---cCCCCeEEccccccccCCCC-----------Ccc
Q 014478 79 WETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILF---DKDGNPRLSSFGLMKNSRDG-----------KSY 144 (424)
Q Consensus 79 ~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill---~~~~~~kl~Dfg~~~~~~~~-----------~~~ 144 (424)
....+++.+++.++.|++.||.|||+++ |+||||||+|||+ +.++.+||+|||+++..... ...
T Consensus 98 -~~~~~~~~~~~~i~~qi~~~l~~LH~~~-ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~ 175 (296)
T 4hgt_A 98 -CSRKFSLKTVLLLADQMISRIEYIHSKN-FIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNL 175 (296)
T ss_dssp -TTSCCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEECCGGGTTCEEECCCTTCEECBCTTTCCBCCCCCSCCC
T ss_pred -hcCCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCCHHHeeeeccCCCCeEEEecCccceeccCcccCccCCCCccccc
Confidence 3457999999999999999999999999 9999999999999 78899999999999865432 234
Q ss_pred ccCccCCCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhcccCC---CCCchhHHHHHHHH
Q 014478 145 STNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEG---HFSNDEGTELVRLA 221 (424)
Q Consensus 145 ~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~l~~li 221 (424)
.||+.|+|||++.+..++.++|||||||++|+|++|+.||........ .............. .....+++++.+++
T Consensus 176 ~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 254 (296)
T 4hgt_A 176 TGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATK-RQKYERISEKKMSTPIEVLCKGYPSEFATYL 254 (296)
T ss_dssp CSCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSS-SSHHHHHHHHHHHSCHHHHTTTSCHHHHHHH
T ss_pred CCCccccchHHhcCCCCCchhHHHHHHHHHHHHhcCCCCCcccchhhh-hhhhhhhhcccccchhhhhhccCCHHHHHHH
Confidence 689999999999988999999999999999999999988875311100 01111111111111 11234577999999
Q ss_pred HHhcccCcCCCCCHHHHHHHHHHHhhhhh
Q 014478 222 SRCLQSEARERPNAKSLVISLMSLQKEAE 250 (424)
Q Consensus 222 ~~cl~~dp~~Rps~~~~~~~l~~~~~~~~ 250 (424)
.+||+.||++|||++++++.|+.+.....
T Consensus 255 ~~~l~~~p~~Rpt~~~l~~~l~~~~~~~~ 283 (296)
T 4hgt_A 255 NFCRSLRFDDKPDYSYLRQLFRNLFHRQG 283 (296)
T ss_dssp HHHHTSCTTCCCCHHHHHHHHHHHHHHHT
T ss_pred HHHHhcCCCCCCCHHHHHHHHHHHHHHhC
Confidence 99999999999999999999999887654
|
| >1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-41 Score=328.25 Aligned_cols=238 Identities=14% Similarity=0.154 Sum_probs=191.8
Q ss_pred CCCcccceeee--ecceecccccCCCchhhhHHHHHHHHHhcCC--------CcCcceeEEEEE----eCCeeeEEEecC
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESSDLGETLNLEEAKAVGNLR--------SERLANLIGCCY----EADERLLVAEFM 67 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~~~~~~~~~~E~~~l~~l~--------h~~iv~~~~~~~----~~~~~~lv~e~~ 67 (424)
|+||.||.+.+ .+..|++|++.......+.+.+|+++++.++ |+||+++++++. .+...++||||+
T Consensus 48 G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~~~~~~~~~~lv~e~~ 127 (397)
T 1wak_A 48 GHFSTVWLSWDIQGKKFVAMKVVKSAEHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISGVNGTHICMVFEVL 127 (397)
T ss_dssp CSSEEEEEEEETTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEEEETTEEEEEEEECCC
T ss_pred cCCeeEEEEEecCCCeEEEEEEEecCCcchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecceeecCCCCceEEEEEecc
Confidence 89999999977 5677899998877777788999999999995 788999999987 445789999999
Q ss_pred CCCCHHhHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhC-CCcccccCCCCCeeecCCC---------------------
Q 014478 68 PNETLAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSK-GRALYHDLNAYRILFDKDG--------------------- 125 (424)
Q Consensus 68 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~-~~ivH~dikp~Nill~~~~--------------------- 125 (424)
+++|.+++.......+++..++.++.||+.||.|||++ + |+||||||+|||++.++
T Consensus 128 -~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~g-ivHrDikp~NIll~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (397)
T 1wak_A 128 -GHHLLKWIIKSNYQGLPLPCVKKIIQQVLQGLDYLHTKCR-IIHTDIKPENILLSVNEQYIRRLAAEATEWQRSGAPPP 205 (397)
T ss_dssp -CCBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTC-EECCCCSGGGEEECCCHHHHHHHHHHHC----------
T ss_pred -CccHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHhCC-EecCCCCHHHeeEeccchhhhhhhhhhHHHhhcCCCCC
Confidence 55777776554456799999999999999999999998 8 99999999999998775
Q ss_pred ----------------------------CeEEccccccccCCCC-CccccCccCCCccccccCCCCCCcceehhHHHHHH
Q 014478 126 ----------------------------NPRLSSFGLMKNSRDG-KSYSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLD 176 (424)
Q Consensus 126 ----------------------------~~kl~Dfg~~~~~~~~-~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~e 176 (424)
.+||+|||+++..... ....||+.|+|||++.+..++.++|||||||++||
T Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~e 285 (397)
T 1wak_A 206 SGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKHFTEDIQTRQYRSLEVLIGSGYNTPADIWSTACMAFE 285 (397)
T ss_dssp -----------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBCSCSCCSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHH
T ss_pred CCCccccCCcccccccccccccccccccceEeccccccccccccCccCCCCCcccCChhhcCCCCCcHHHHHHHHHHHHH
Confidence 7999999999866543 44578999999999998889999999999999999
Q ss_pred HhhCCCCCCchhhHHH-----hhhhhhHhhhc-------------------------------------ccCCCCCchhH
Q 014478 177 LLSGKHIPPSHALDLI-----RSKNFLLLMDS-------------------------------------ALEGHFSNDEG 214 (424)
Q Consensus 177 l~~g~~~~~~~~~~~~-----~~~~~~~~~~~-------------------------------------~~~~~~~~~~~ 214 (424)
|++|..||........ ........... ......+...+
T Consensus 286 lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 365 (397)
T 1wak_A 286 LATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKGDLKHITKLKPWGLFEVLVEKYEWSQEEA 365 (397)
T ss_dssp HHHSSCSCCCCCCSSSCHHHHHHHHHHHHHCSCCHHHHHHCTTGGGTBCTTSSBSSCCCCCCCCHHHHHHHTSCCCHHHH
T ss_pred HhhCCCCCCCCcccccCchHHHHHHHHHhcCCCChHHhhcccccccccCCccccccccccCCcchhHhhhhhcccchhhH
Confidence 9999988864311100 00000000000 00112355678
Q ss_pred HHHHHHHHHhcccCcCCCCCHHHHHHH
Q 014478 215 TELVRLASRCLQSEARERPNAKSLVIS 241 (424)
Q Consensus 215 ~~l~~li~~cl~~dp~~Rps~~~~~~~ 241 (424)
.++.+||.+||+.||++|||+++++++
T Consensus 366 ~~~~~li~~~L~~dP~~Rpt~~e~l~h 392 (397)
T 1wak_A 366 AGFTDFLLPMLELIPEKRATAAECLRH 392 (397)
T ss_dssp HHHHHHHGGGGCSSGGGSCCHHHHHTS
T ss_pred HHHHHHHHHHhccChhhcCCHHHHhhC
Confidence 889999999999999999999999865
|
| >1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.6e-41 Score=316.33 Aligned_cols=237 Identities=13% Similarity=0.144 Sum_probs=194.9
Q ss_pred CCCcccceeee---ecceecccccCCCchhhhHHHHHHHHHhcCCCcC------cceeEEEEEeCCeeeEEEecCCCCCH
Q 014478 2 GGRCSKFSICW---FHCHLKSSVLESSDLGETLNLEEAKAVGNLRSER------LANLIGCCYEADERLLVAEFMPNETL 72 (424)
Q Consensus 2 G~~g~v~~~~~---~~~~v~~~~~~~~~~~~~~~~~E~~~l~~l~h~~------iv~~~~~~~~~~~~~lv~e~~~~gsL 72 (424)
|++|.||.+.+ .+..|++|++.......+.+.+|+++++.++|++ |+++++++...+..++||||+ +++|
T Consensus 25 G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~-~~~l 103 (339)
T 1z57_A 25 GAFGKVVECIDHKAGGRHVAVKIVKNVDRYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHHGHICIVFELL-GLST 103 (339)
T ss_dssp ETTEEEEEEEETTTTTEEEEEEEECSSHHHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEETTEEEEEEECC-CCBH
T ss_pred CCCeEEEEEEecCCCCcEEEEEEEecCCchhHHHHHHHHHHHHhhhcCCCCceeeEeeecccccCCcEEEEEcCC-CCCH
Confidence 89999999976 4677899988877766788999999999997665 999999999999999999999 8899
Q ss_pred HhHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecC-------------------CCCeEEcccc
Q 014478 73 AKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDK-------------------DGNPRLSSFG 133 (424)
Q Consensus 73 ~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~-------------------~~~~kl~Dfg 133 (424)
.+++......++++.++..++.|++.||.|||+++ |+||||||+|||++. ++.+||+|||
T Consensus 104 ~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~-ivH~Dlkp~Nil~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg 182 (339)
T 1z57_A 104 YDFIKENGFLPFRLDHIRKMAYQICKSVNFLHSNK-LTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFG 182 (339)
T ss_dssp HHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEESCCCEEEEEC----CEEEEESCCCEEECCCS
T ss_pred HHHHHhcCCCCCcHHHHHHHHHHHHHHHHHHHHCC-CcCCCCCHHHEEEeccccccccCCccccccccccCCCceEeeCc
Confidence 99997655557999999999999999999999999 999999999999987 6789999999
Q ss_pred ccccCCCC-CccccCccCCCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhc---------
Q 014478 134 LMKNSRDG-KSYSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDS--------- 203 (424)
Q Consensus 134 ~~~~~~~~-~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~--------- 203 (424)
+++..... ....||+.|+|||++.+..++.++|||||||++|||++|..||+.......... .......
T Consensus 183 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~-~~~~~~~~p~~~~~~~ 261 (339)
T 1z57_A 183 SATYDDEHHSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKEHLAM-MERILGPLPKHMIQKT 261 (339)
T ss_dssp SCEETTSCCCSSCSCGGGCCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSCHHHHHHH-HHHHHCSCCHHHHHHC
T ss_pred ccccCccccccccCCccccChHHhhCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHH-HHHHhCCCCHHHHhhc
Confidence 99875543 455789999999999988999999999999999999999998876422211100 0000000
Q ss_pred ------------------------------ccCCCCCchhHHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 014478 204 ------------------------------ALEGHFSNDEGTELVRLASRCLQSEARERPNAKSLVIS 241 (424)
Q Consensus 204 ------------------------------~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~~~~~ 241 (424)
......+...++++.+||.+||+.||.+|||+.+++++
T Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~h 329 (339)
T 1z57_A 262 RKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEYDPAKRITLREALKH 329 (339)
T ss_dssp SCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCHHHHTTS
T ss_pred cchhHHhhccccccccccccchhhhcCcchhhhcccchhhHHHHHHHHHHHhCcCcccccCHHHHhcC
Confidence 00011233567889999999999999999999999865
|
| >3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-41 Score=322.35 Aligned_cols=234 Identities=9% Similarity=0.073 Sum_probs=192.6
Q ss_pred CCCcccceeee-------ecceecccccCCCchhhhHHHHHHHHHhcCC---CcCcceeEEEEEeCCeeeEEEecCCCCC
Q 014478 2 GGRCSKFSICW-------FHCHLKSSVLESSDLGETLNLEEAKAVGNLR---SERLANLIGCCYEADERLLVAEFMPNET 71 (424)
Q Consensus 2 G~~g~v~~~~~-------~~~~v~~~~~~~~~~~~~~~~~E~~~l~~l~---h~~iv~~~~~~~~~~~~~lv~e~~~~gs 71 (424)
|+||.||.+.+ .+..+++|++.... ...+..|++++..++ |+||+++++++...+..++||||++||+
T Consensus 76 G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~e~~~~~~l~~~~~~~iv~~~~~~~~~~~~~lv~e~~~~g~ 153 (365)
T 3e7e_A 76 GAFAQVYEATQGDLNDAKNKQKFVLKVQKPAN--PWEFYIGTQLMERLKPSMQHMFMKFYSAHLFQNGSVLVGELYSYGT 153 (365)
T ss_dssp CSSEEEEEEEC-------CCCCEEEEEESSCC--HHHHHHHHHHHHHSCGGGGGGBCCEEEEEECSSCEEEEECCCCSCB
T ss_pred cCCEEEEEEEecCCcccccCcEEEEEEeCCCC--hhHHHHHHHHHHHhhhhhhhhhhhhheeeecCCCcEEEEeccCCCc
Confidence 89999999942 56678888876543 456788888888886 9999999999999999999999999999
Q ss_pred HHhHhccC---CCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecC-----------CCCeEEcccccccc
Q 014478 72 LAKHLFHW---ETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDK-----------DGNPRLSSFGLMKN 137 (424)
Q Consensus 72 L~~~l~~~---~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~-----------~~~~kl~Dfg~~~~ 137 (424)
|.+++... ....+++.+++.++.||+.||.|||+++ ||||||||+|||++. ++.+||+|||+++.
T Consensus 154 L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~-ivHrDiKp~NIll~~~~~~~~~~~~~~~~~kl~DFG~a~~ 232 (365)
T 3e7e_A 154 LLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDCE-IIHGDIKPDNFILGNGFLEQDDEDDLSAGLALIDLGQSID 232 (365)
T ss_dssp HHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHTTT-EECCCCSGGGEEECGGGTCC------CTTEEECCCTTCEE
T ss_pred HHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhhCC-eecCCCCHHHEEecccccCccccccccCCEEEeeCchhhh
Confidence 99999631 2467999999999999999999999999 999999999999988 89999999999965
Q ss_pred CC---C---CCccccCccCCCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhcccCCCCCc
Q 014478 138 SR---D---GKSYSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSN 211 (424)
Q Consensus 138 ~~---~---~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 211 (424)
.. . .....||+.|+|||++.+..++.++|||||||++|||++|+.||......... ..... ...
T Consensus 233 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~-------~~~~~-~~~-- 302 (365)
T 3e7e_A 233 MKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKVKNEGGECK-------PEGLF-RRL-- 302 (365)
T ss_dssp GGGSCTTEEECCSSCTTSCCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCCCEEEETTEEE-------ECSCC-TTC--
T ss_pred hhccCCCceeeeecCCCCCCChHHhcCCCCCccccHHHHHHHHHHHHhCCCccccCCCCcee-------echhc-ccc--
Confidence 32 1 13456899999999999988999999999999999999999887643111000 11111 111
Q ss_pred hhHHHHHHHHHHhcccCcCCC-CCHHHHHHHHHHHhhh
Q 014478 212 DEGTELVRLASRCLQSEARER-PNAKSLVISLMSLQKE 248 (424)
Q Consensus 212 ~~~~~l~~li~~cl~~dp~~R-ps~~~~~~~l~~~~~~ 248 (424)
..++.+.+++.+||+.+|.+| |++.++.+.|+.....
T Consensus 303 ~~~~~~~~~~~~~l~~~p~~r~~~~~~l~~~l~~~l~~ 340 (365)
T 3e7e_A 303 PHLDMWNEFFHVMLNIPDCHHLPSLDLLRQKLKKVFQQ 340 (365)
T ss_dssp SSHHHHHHHHHHHHCCCCTTCCCCHHHHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHcCCCCCCcchHHHHHHHHHHHHHHH
Confidence 236789999999999999999 7889998888887765
|
| >2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-41 Score=315.50 Aligned_cols=239 Identities=17% Similarity=0.243 Sum_probs=176.5
Q ss_pred CCCcccceeee--ecceecccccCCCc--hhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHhHhc
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESSD--LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLF 77 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~~--~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~ 77 (424)
|++|.||.+.+ .+..|++|++.... ...+.+.+|+.++++++||||+++++++...+..++||||+++++|.+++.
T Consensus 26 G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~ 105 (303)
T 2vwi_A 26 GATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIK 105 (303)
T ss_dssp --CCCEEEEEC----CEEEEECCC----------------CCCCCCCTTBCCEEEEEESSSCEEEEEECCTTCBHHHHHH
T ss_pred ccceEEEEEEECCCCcEEEEEEEEhhhcchhHHHHHHHHHHHhhcCCCCEeeEEEEEeecCCcEEEehhccCCchHHHHH
Confidence 89999999987 57778888775432 345678899999999999999999999999999999999999999999985
Q ss_pred c------CCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCC---------C
Q 014478 78 H------WETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG---------K 142 (424)
Q Consensus 78 ~------~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~---------~ 142 (424)
. .....+++..++.++.|++.||.|||+++ ++||||||+||+++.++.+||+|||++...... .
T Consensus 106 ~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~-i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~ 184 (303)
T 2vwi_A 106 HIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNG-QIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRK 184 (303)
T ss_dssp HHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCSGGGEEECTTCCEEECCCHHHHHCC------------
T ss_pred HHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCC-CCCCCCChhhEEEcCCCCEEEEeccchheeccCCCccchhhhc
Confidence 3 12456999999999999999999999999 999999999999999999999999998765422 2
Q ss_pred ccccCccCCCcccccc-CCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhH----hhhcccCCCCCchhHHHH
Q 014478 143 SYSTNLAFTPPEYMRT-GRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLL----LMDSALEGHFSNDEGTEL 217 (424)
Q Consensus 143 ~~~gt~~y~aPE~~~~-~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~l 217 (424)
...||+.|+|||.+.+ ..++.++||||||+++|+|++|..||............... .............++.++
T Consensus 185 ~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (303)
T 2vwi_A 185 TFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDPPSLETGVQDKEMLKKYGKSF 264 (303)
T ss_dssp ---CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTTTSCGGGHHHHHHTSSCCCTTC-----CCCCCCCHHH
T ss_pred ccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHhCCCCCccCchhhHHHHHhccCCCccccccccchhhhhhhHHH
Confidence 3468999999999876 46899999999999999999999887653211110000000 000001112234567889
Q ss_pred HHHHHHhcccCcCCCCCHHHHHHH
Q 014478 218 VRLASRCLQSEARERPNAKSLVIS 241 (424)
Q Consensus 218 ~~li~~cl~~dp~~Rps~~~~~~~ 241 (424)
.+++.+||+.||.+|||+.+++++
T Consensus 265 ~~li~~~l~~dp~~Rps~~~ll~h 288 (303)
T 2vwi_A 265 RKMISLCLQKDPEKRPTAAELLRH 288 (303)
T ss_dssp HHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred HHHHHHHccCChhhCcCHHHHhhC
Confidence 999999999999999999999864
|
| >3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.5e-41 Score=329.87 Aligned_cols=242 Identities=15% Similarity=0.135 Sum_probs=193.6
Q ss_pred CCCcccceeee--ecceecccccCCCchhhhHHHHHHHHHhcCCC-cCcceeEEEEEeCCeeeEEEecCCCCCHHhHhcc
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESSDLGETLNLEEAKAVGNLRS-ERLANLIGCCYEADERLLVAEFMPNETLAKHLFH 78 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~~~~~~~~~~E~~~l~~l~h-~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~ 78 (424)
|+||.||.+.+ .+..|++|++..... ...+.+|+++++.++| ++|+.+..++...+..+|||||+ +++|.+++..
T Consensus 18 G~fG~Vy~a~~~~~~~~vAvK~~~~~~~-~~~~~~E~~il~~L~~~~~i~~i~~~~~~~~~~~lvme~~-g~sL~~ll~~ 95 (483)
T 3sv0_A 18 GSFGEIYLGTNIQTNEEVAIKLENVKTK-HPQLLYESKIYRILQGGTGIPNVRWFGVEGDYNVLVMDLL-GPSLEDLFNF 95 (483)
T ss_dssp CSSCEEEEEEETTTCCEEEEEEEETTCS-SCCHHHHHHHHHHTTTSTTCCCEEEEEEETTEEEEEEECC-CCBHHHHHHH
T ss_pred CCCEEEEEEEECCCCcEEEEEEeccccc-cHHHHHHHHHHHHhcCCCCCCeEEEEEeeCCEEEEEEECC-CCCHHHHHHh
Confidence 89999999987 477788887654432 3568899999999976 66777777778888899999999 8999999964
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeee---cCCCCeEEccccccccCCCCC-----------cc
Q 014478 79 WETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILF---DKDGNPRLSSFGLMKNSRDGK-----------SY 144 (424)
Q Consensus 79 ~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill---~~~~~~kl~Dfg~~~~~~~~~-----------~~ 144 (424)
....+++.+++.|+.||+.||.|||+++ ||||||||+|||+ +.++.+||+|||+++...... ..
T Consensus 96 -~~~~l~~~~~~~i~~qi~~aL~yLH~~g-IvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~ 173 (483)
T 3sv0_A 96 -CSRKLSLKTVLMLADQMINRVEFVHSKS-FLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRDTSTHQHIPYRENKNL 173 (483)
T ss_dssp -TTTCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEECCGGGTTCEEECCCTTCEECBCTTTCCBCCCCCCCCC
T ss_pred -hcCCCCHHHHHHHHHHHHHHHHHHHHCC-EeecccCcceEEEecCCCCCeEEEEeCCcceeccCCcccccccccccccc
Confidence 3567999999999999999999999999 9999999999999 588999999999998654321 45
Q ss_pred ccCccCCCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhccc---CCCCCchhHHHHHHHH
Q 014478 145 STNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSAL---EGHFSNDEGTELVRLA 221 (424)
Q Consensus 145 ~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~l~~li 221 (424)
.||+.|+|||++.+..++.++|||||||++|||++|+.||........ ...+..+..... ....+..++.++.+|+
T Consensus 174 ~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~-~~~~~~i~~~~~~~~~~~l~~~~p~~l~~li 252 (483)
T 3sv0_A 174 TGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTK-KQKYEKISEKKVATSIEALCRGYPTEFASYF 252 (483)
T ss_dssp CSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSH-HHHHHHHHHHHHHSCHHHHHTTSCHHHHHHH
T ss_pred CCCccccCHHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccchhH-HHHHHHHhhccccccHHHHhcCCcHHHHHHH
Confidence 689999999999998999999999999999999999988875311000 000111111100 0111234567899999
Q ss_pred HHhcccCcCCCCCHHHHHHHHHHHhhh
Q 014478 222 SRCLQSEARERPNAKSLVISLMSLQKE 248 (424)
Q Consensus 222 ~~cl~~dp~~Rps~~~~~~~l~~~~~~ 248 (424)
.+||..||++||++.+|++.|+.+...
T Consensus 253 ~~cl~~dP~~RPs~~el~~~L~~l~~~ 279 (483)
T 3sv0_A 253 HYCRSLRFDDKPDYSYLKRLFRDLFIR 279 (483)
T ss_dssp HHHHTCCTTCCCCHHHHHHHHHHHHHH
T ss_pred HHHhcCChhhCcCHHHHHHHHHHHHHH
Confidence 999999999999999999999988654
|
| >3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-41 Score=318.59 Aligned_cols=239 Identities=16% Similarity=0.162 Sum_probs=179.1
Q ss_pred CCCcccceeee--ecceecccccCCCc-hhhhHHHHHHHHHhcCC-CcCcceeEEEEEe--------CCeeeEEEecCCC
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESSD-LGETLNLEEAKAVGNLR-SERLANLIGCCYE--------ADERLLVAEFMPN 69 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~~-~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~--------~~~~~lv~e~~~~ 69 (424)
|+||.||.+.+ .+..+++|++.... .....+.+|+.++.++. ||||+++++++.. ....++||||+.
T Consensus 39 G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~~~~~~lv~e~~~- 117 (337)
T 3ll6_A 39 GGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQAEFLLLTELCK- 117 (337)
T ss_dssp CSSEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTSTTSSEEEEEEEECCS-
T ss_pred CCceEEEEEEECCCCcEEEEEEecCCchHHHHHHHHHHHHHHHhccCCChhhccccccccccccccCCceEEEEEEecC-
Confidence 89999999998 66778888764433 44677889999999995 9999999999953 334789999996
Q ss_pred CCHHhHhccC-CCCCCCHHHHHHHHHHHHHHHHHHHhCC-CcccccCCCCCeeecCCCCeEEccccccccCCCCC-----
Q 014478 70 ETLAKHLFHW-ETQPMKWAMRLRVALYLAQALEYCSSKG-RALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGK----- 142 (424)
Q Consensus 70 gsL~~~l~~~-~~~~l~~~~~~~i~~qi~~~L~~lH~~~-~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~~----- 142 (424)
|+|.+++... ...++++.+++.++.||+.||.|||+++ +|+||||||+|||++.++.+||+|||+++......
T Consensus 118 g~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~ 197 (337)
T 3ll6_A 118 GQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQKPPIIHRDLKVENLLLSNQGTIKLCDFGSATTISHYPDYSWS 197 (337)
T ss_dssp EEHHHHHHHHHTTCSCCHHHHHHHHHHHHHHHHHHHTSSSCCBCCCCCGGGCEECTTSCEEBCCCTTCBCCSSCC-----
T ss_pred CCHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhCCCCEEEccCCcccEEECCCCCEEEecCccceeccccCccccc
Confidence 6999888531 3457999999999999999999999985 49999999999999999999999999998654321
Q ss_pred -----------ccccCccCCCcccc---ccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhcccCCC
Q 014478 143 -----------SYSTNLAFTPPEYM---RTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGH 208 (424)
Q Consensus 143 -----------~~~gt~~y~aPE~~---~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (424)
...||+.|+|||++ .+..++.++|||||||++|+|++|..||...... ..........
T Consensus 198 ~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~--------~~~~~~~~~~ 269 (337)
T 3ll6_A 198 AQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAKL--------RIVNGKYSIP 269 (337)
T ss_dssp --------------------------CCTTSCSSHHHHHHHHHHHHHHHHHSSCCC--------------------CCCC
T ss_pred ccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHhCCCCCcchhHH--------HhhcCcccCC
Confidence 33488999999998 4567889999999999999999999887653211 1122222223
Q ss_pred CCchhHHHHHHHHHHhcccCcCCCCCHHHHHHHHHHHhhhh
Q 014478 209 FSNDEGTELVRLASRCLQSEARERPNAKSLVISLMSLQKEA 249 (424)
Q Consensus 209 ~~~~~~~~l~~li~~cl~~dp~~Rps~~~~~~~l~~~~~~~ 249 (424)
.+...+..+.+|+.+||+.||.+|||+.+++++|+.+....
T Consensus 270 ~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~~~~~~~ 310 (337)
T 3ll6_A 270 PHDTQYTVFHSLIRAMLQVNPEERLSIAEVVHQLQEIAAAR 310 (337)
T ss_dssp TTCCSSGGGHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHHT
T ss_pred cccccchHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhcc
Confidence 33445667999999999999999999999999999987653
|
| >3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-40 Score=316.13 Aligned_cols=236 Identities=19% Similarity=0.205 Sum_probs=185.5
Q ss_pred CCCcccceeee--ecceecccccCCCc---hhhhHHHHHHHHHhcCCCcCcceeEEEEEeC--------CeeeEEEecCC
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESSD---LGETLNLEEAKAVGNLRSERLANLIGCCYEA--------DERLLVAEFMP 68 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~~---~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~--------~~~~lv~e~~~ 68 (424)
|++|.||.+.+ .+..+++|++.... .....+.+|+++++.++||||+++++++... +..++||||++
T Consensus 28 G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~~lv~e~~~ 107 (351)
T 3mi9_A 28 GTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCE 107 (351)
T ss_dssp CSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC--------CEEEEEEECCS
T ss_pred CCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhccCCCcccHhheeeccccccccCCceEEEEEeccC
Confidence 89999999988 56778888774433 2245788999999999999999999999873 46899999998
Q ss_pred CCCHHhHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCC-------
Q 014478 69 NETLAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG------- 141 (424)
Q Consensus 69 ~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~------- 141 (424)
+ +|.+.+.. ....+++.+++.++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++.....
T Consensus 108 ~-~l~~~l~~-~~~~~~~~~~~~i~~qi~~~l~~LH~~~-ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~~~~~ 184 (351)
T 3mi9_A 108 H-DLAGLLSN-VLVKFTLSEIKRVMQMLLNGLYYIHRNK-ILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNR 184 (351)
T ss_dssp E-EHHHHHHC-TTSCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEECTTSCEEECCCTTCEECCCCSSSSCCC
T ss_pred C-CHHHHHhh-ccCCCCHHHHHHHHHHHHHHHHHHHHCC-eeCCCCCHHHEEEcCCCCEEEccchhcccccccccccccc
Confidence 6 78777754 3457999999999999999999999999 999999999999999999999999999765421
Q ss_pred -CccccCccCCCcccccc-CCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhcccCCCCCc--------
Q 014478 142 -KSYSTNLAFTPPEYMRT-GRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSN-------- 211 (424)
Q Consensus 142 -~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------- 211 (424)
....||+.|+|||++.+ ..++.++|||||||++|+|++|..||........... ............++.
T Consensus 185 ~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~-i~~~~~~~~~~~~~~~~~~~~~~ 263 (351)
T 3mi9_A 185 YTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLAL-ISQLCGSITPEVWPNVDNYELYE 263 (351)
T ss_dssp CCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHH-HHHHHCCCCTTTSTTGGGCGGGT
T ss_pred cCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCCCCCChHHHHHH-HHHHhCCCChhhccccccchhhc
Confidence 23467999999999876 4579999999999999999999988876432211111 111110000000000
Q ss_pred -------------------hhHHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 014478 212 -------------------DEGTELVRLASRCLQSEARERPNAKSLVIS 241 (424)
Q Consensus 212 -------------------~~~~~l~~li~~cl~~dp~~Rps~~~~~~~ 241 (424)
..++++.+||.+||+.||++|||+++++++
T Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 312 (351)
T 3mi9_A 264 KLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNH 312 (351)
T ss_dssp SSCCCSSCCCCHHHHHHHHHCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred ccccccccccCHHHHhhhccCChHHHHHHHHHhcCChhhCCCHHHHhCC
Confidence 015678999999999999999999999865
|
| >2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.6e-41 Score=307.82 Aligned_cols=231 Identities=16% Similarity=0.179 Sum_probs=186.8
Q ss_pred CCCcccceeee--ecceecccccCCCc----hhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHhH
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESSD----LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKH 75 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~~----~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~ 75 (424)
|++|.||.+.+ .+..+++|++.... ...+.+.+|+.+++.++||||+++++++...+..++||||+++++|.++
T Consensus 22 G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~ 101 (276)
T 2h6d_A 22 GTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDY 101 (276)
T ss_dssp CSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEECCCSCBHHHH
T ss_pred CCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCeEEEEEeccCCCcHHHH
Confidence 89999999987 46778888775432 2345788999999999999999999999999999999999999999999
Q ss_pred hccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCC---CccccCccCCC
Q 014478 76 LFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG---KSYSTNLAFTP 152 (424)
Q Consensus 76 l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~---~~~~gt~~y~a 152 (424)
+.. ...+++..++.++.|++.||.|||+++ ++||||||+||+++.++.+||+|||++...... ....+|+.|+|
T Consensus 102 l~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~-i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~y~a 178 (276)
T 2h6d_A 102 ICK--HGRVEEMEARRLFQQILSAVDYCHRHM-VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRTSCGSPNYAA 178 (276)
T ss_dssp HHH--HCSCCHHHHHHHHHHHHHHHHHHHHHC-SSCCCCCGGGEEECTTSCEEECCCCGGGCCCC-------------CC
T ss_pred Hhc--cCCCCHHHHHHHHHHHHHHHHHHHHCC-CccCCCChhhEEECCCCCEEEeecccccccCCCcceecccCCccccC
Confidence 965 357899999999999999999999999 999999999999999999999999999876543 23468899999
Q ss_pred ccccccCCC-CCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHHHHHHHHHhcccCcCC
Q 014478 153 PEYMRTGRV-TPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARE 231 (424)
Q Consensus 153 PE~~~~~~~-~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~ 231 (424)
||.+.+..+ +.++||||||+++|+|++|..||........ ...+.. .....+..++.++.++|.+||+.||++
T Consensus 179 PE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~-----~~~~~~-~~~~~~~~~~~~l~~li~~~l~~~p~~ 252 (276)
T 2h6d_A 179 PEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTL-----FKKIRG-GVFYIPEYLNRSVATLLMHMLQVDPLK 252 (276)
T ss_dssp TGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCCSSHHHH-----HHHHHH-CCCCCCTTSCHHHHHHHHHHTCSSGGG
T ss_pred HHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCCCcHHHH-----HHHhhc-CcccCchhcCHHHHHHHHHHccCChhh
Confidence 999987665 6899999999999999999988865422211 111111 112345566789999999999999999
Q ss_pred CCCHHHHHHH
Q 014478 232 RPNAKSLVIS 241 (424)
Q Consensus 232 Rps~~~~~~~ 241 (424)
|||+.+++++
T Consensus 253 Rps~~~~l~h 262 (276)
T 2h6d_A 253 RATIKDIREH 262 (276)
T ss_dssp SCCHHHHHHS
T ss_pred CCCHHHHHhC
Confidence 9999999986
|
| >2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=6.3e-41 Score=320.66 Aligned_cols=236 Identities=13% Similarity=0.149 Sum_probs=180.4
Q ss_pred CCCcccceeee--ecceecccccCCC---chhhhHHHHHHHHHhcCCCcCcceeEEEEEeCC------eeeEEEecCCCC
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESS---DLGETLNLEEAKAVGNLRSERLANLIGCCYEAD------ERLLVAEFMPNE 70 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~---~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~------~~~lv~e~~~~g 70 (424)
|+||.||.+.. .+..|++|++... ....+.+.+|+.+++.++||||+++++++.... ..++||||+++
T Consensus 36 G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~~lv~e~~~~- 114 (371)
T 2xrw_A 36 GAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDA- 114 (371)
T ss_dssp CSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTTCCEEEEEEECCSE-
T ss_pred cCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCccceEEeeccccccccccceEEEEEcCCC-
Confidence 89999999976 5677888887543 234567889999999999999999999998664 67999999975
Q ss_pred CHHhHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCC---CccccC
Q 014478 71 TLAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG---KSYSTN 147 (424)
Q Consensus 71 sL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~---~~~~gt 147 (424)
+|.+++. ..+++..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++..... ....||
T Consensus 115 ~l~~~~~----~~~~~~~~~~i~~qi~~al~~lH~~~-ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt 189 (371)
T 2xrw_A 115 NLCQVIQ----MELDHERMSYLLYQMLCGIKHLHSAG-IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVT 189 (371)
T ss_dssp EHHHHHH----SCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEECTTSCEEECCCCC----------------
T ss_pred CHHHHHh----hccCHHHHHHHHHHHHHHHHHHHHCC-eecccCCHHHEEEcCCCCEEEEEeecccccccccccCCceec
Confidence 8888884 35899999999999999999999999 999999999999999999999999999876543 345789
Q ss_pred ccCCCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhh------------------Hhhhccc----
Q 014478 148 LAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFL------------------LLMDSAL---- 205 (424)
Q Consensus 148 ~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~------------------~~~~~~~---- 205 (424)
+.|+|||++.+..++.++|||||||++|+|++|..||........-..... .......
T Consensus 190 ~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (371)
T 2xrw_A 190 RYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKYAG 269 (371)
T ss_dssp CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHC-CCCCCHHHHTTSCHHHHHHHHSSCCCCC
T ss_pred CCccCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHhhhHHHHHHhhCccccc
Confidence 999999999988899999999999999999999988876422111000000 0000000
Q ss_pred -----------CCC---CCchhHHHHHHHHHHhcccCcCCCCCHHHHHHHHH
Q 014478 206 -----------EGH---FSNDEGTELVRLASRCLQSEARERPNAKSLVISLM 243 (424)
Q Consensus 206 -----------~~~---~~~~~~~~l~~li~~cl~~dp~~Rps~~~~~~~l~ 243 (424)
... .+...+.++.+||.+||..||++|||+++++++-.
T Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp~ 321 (371)
T 2xrw_A 270 YSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPY 321 (371)
T ss_dssp CCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSGGGSCCHHHHHHSHH
T ss_pred cchhhhcccccCcccccccccccHHHHHHHHHHCcCChhhCCCHHHHhCCcc
Confidence 000 01123678999999999999999999999998643
|
| >3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-42 Score=331.87 Aligned_cols=227 Identities=13% Similarity=0.086 Sum_probs=179.7
Q ss_pred CCCcccceeee--ecceecccccCC----CchhhhHHHHHH---HHHhcCCCcCcceeE-------EEEEeCCe------
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLES----SDLGETLNLEEA---KAVGNLRSERLANLI-------GCCYEADE------ 59 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~----~~~~~~~~~~E~---~~l~~l~h~~iv~~~-------~~~~~~~~------ 59 (424)
|+||.||.+.+ .+..|++|++.. .....+.+.+|+ +.+++++||||++++ +++...+.
T Consensus 84 G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~~~~~~~~~~~~~~ 163 (377)
T 3byv_A 84 EDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLVKDPQKKKMIRV 163 (377)
T ss_dssp ETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSEEEECTTSCSEEEC
T ss_pred CCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhhhhhccCCcccccc
Confidence 89999999987 477889988752 333467888999 556666899999998 77665532
Q ss_pred -----------eeEEEecCCCCCHHhHhccCC-----CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecC
Q 014478 60 -----------RLLVAEFMPNETLAKHLFHWE-----TQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDK 123 (424)
Q Consensus 60 -----------~~lv~e~~~~gsL~~~l~~~~-----~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~ 123 (424)
.+|||||+ +|+|.+++.... ...+++..++.++.||+.||.|||+++ |+||||||+|||++.
T Consensus 164 ~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~-ivHrDikp~NIll~~ 241 (377)
T 3byv_A 164 RLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYG-LVHTYLRPVDIVLDQ 241 (377)
T ss_dssp ------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHHHTT-EECSCCCGGGEEECT
T ss_pred ccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHHhCC-eecCCCCHHHEEEcC
Confidence 78999999 679999996421 112335888899999999999999999 999999999999999
Q ss_pred CCCeEEccccccccCCCC-CccccCccCCCccccccC-----------CCCCCcceehhHHHHHHHhhCCCCCCchhhHH
Q 014478 124 DGNPRLSSFGLMKNSRDG-KSYSTNLAFTPPEYMRTG-----------RVTPESVVYSFGTMLLDLLSGKHIPPSHALDL 191 (424)
Q Consensus 124 ~~~~kl~Dfg~~~~~~~~-~~~~gt~~y~aPE~~~~~-----------~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~ 191 (424)
++.+||+|||+++..... ....| +.|+|||++.+. .++.++|||||||++|||++|+.||......
T Consensus 242 ~~~~kL~DFG~a~~~~~~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DvwSlG~il~elltg~~Pf~~~~~~- 319 (377)
T 3byv_A 242 RGGVFLTGFEHLVRDGARVVSSVS-RGFEPPELEARRATISYHRDRRTLMTFSFDAWALGLVIYWIWCADLPITKDAAL- 319 (377)
T ss_dssp TCCEEECCGGGCEETTCEEECCCC-TTCCCHHHHHHHTSTHHHHCCEEECCHHHHHHHHHHHHHHHHHSSCCC-------
T ss_pred CCCEEEEechhheecCCcccCCCC-cCccChhhhcccccccccccccccCChhhhHHHHHHHHHHHHHCCCCCcccccc-
Confidence 999999999999875543 33456 999999999987 7999999999999999999999887653111
Q ss_pred HhhhhhhHhhhcccCCCCCchhHHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 014478 192 IRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERPNAKSLVIS 241 (424)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~~~~~ 241 (424)
....... .....+++++.++|.+||+.||++|||+.+++++
T Consensus 320 ---~~~~~~~------~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~h 360 (377)
T 3byv_A 320 ---GGSEWIF------RSCKNIPQPVRALLEGFLRYPKEDRLLPLQAMET 360 (377)
T ss_dssp ---CCSGGGG------SSCCCCCHHHHHHHHHHTCSSGGGCCCHHHHHTS
T ss_pred ---cchhhhh------hhccCCCHHHHHHHHHHcCCCchhCCCHHHHhhC
Confidence 1111111 1124567899999999999999999999999974
|
| >3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.3e-41 Score=327.47 Aligned_cols=236 Identities=14% Similarity=0.142 Sum_probs=182.5
Q ss_pred CCCcccceeee--ecceecccccCCC---chhhhHHHHHHHHHhcCCCcCcceeEEEEEeC-----CeeeEEEecCCCCC
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESS---DLGETLNLEEAKAVGNLRSERLANLIGCCYEA-----DERLLVAEFMPNET 71 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~---~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~-----~~~~lv~e~~~~gs 71 (424)
|++|.||.+.+ .+..|++|++... ....+.+.+|+++|+.++||||+++++++... ...|+||||++ |+
T Consensus 37 G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~~~lv~e~~~-~~ 115 (432)
T 3n9x_A 37 GSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFDELYIVLEIAD-SD 115 (432)
T ss_dssp ETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCCEEEEEECCS-EE
T ss_pred cCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcCCeEEEEEecCC-cC
Confidence 89999999987 4567888887543 23457889999999999999999999999876 56899999996 59
Q ss_pred HHhHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCC----------
Q 014478 72 LAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG---------- 141 (424)
Q Consensus 72 L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~---------- 141 (424)
|.+++.. ...+++..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++.....
T Consensus 116 L~~~~~~--~~~l~~~~~~~i~~qil~aL~~LH~~g-ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~~~ 192 (432)
T 3n9x_A 116 LKKLFKT--PIFLTEEHIKTILYNLLLGENFIHESG-IIHRDLKPANCLLNQDCSVKVCDFGLARTINSEKDTNIVNDLE 192 (432)
T ss_dssp HHHHHHS--SCCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEECTTCCEEECCCTTCEEC-------------
T ss_pred HHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHHCC-CCCCCCCHHHeEECCCCCEEEccCCCccccccccccccccccc
Confidence 9999964 567999999999999999999999999 999999999999999999999999999865432
Q ss_pred ----------------CccccCccCCCcccc-ccCCCCCCcceehhHHHHHHHhhCCCC-----------CCchhh----
Q 014478 142 ----------------KSYSTNLAFTPPEYM-RTGRVTPESVVYSFGTMLLDLLSGKHI-----------PPSHAL---- 189 (424)
Q Consensus 142 ----------------~~~~gt~~y~aPE~~-~~~~~~~~~Dv~slG~~l~el~~g~~~-----------~~~~~~---- 189 (424)
....||+.|+|||++ ....++.++|||||||++|||++|..| |++...
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~~~~~~~~p~f~g~~~~~~~ 272 (432)
T 3n9x_A 193 ENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSHINDPTNRFPLFPGSSCFPLS 272 (432)
T ss_dssp ------------------CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHTTCTTTCSSGGGCCCSCCCSCSCC--
T ss_pred ccccccccccchhccccCCCCCccccCHHHHhcCCCCCcccccchHHHHHHHHHhcccccccccccccccCCCccccccC
Confidence 345689999999986 455699999999999999999985433 322110
Q ss_pred --------------HHH------------------hhhhhhHhhhcccC-CCC-----CchhHHHHHHHHHHhcccCcCC
Q 014478 190 --------------DLI------------------RSKNFLLLMDSALE-GHF-----SNDEGTELVRLASRCLQSEARE 231 (424)
Q Consensus 190 --------------~~~------------------~~~~~~~~~~~~~~-~~~-----~~~~~~~l~~li~~cl~~dp~~ 231 (424)
+.. ........+..... ... .+.+++++.+||.+||+.||++
T Consensus 273 ~~~~~~~~~~~~~~~ql~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~ 352 (432)
T 3n9x_A 273 PDRNSKKVHEKSNRDQLNIIFNIIGTPTEDDLKNINKPEVIKYIKLFPHRKPINLKQKYPSISDDGINLLESMLKFNPNK 352 (432)
T ss_dssp --------CHHHHHHHHHHHHHHHCSCCHHHHHTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSSTTT
T ss_pred cccccccccccchHHHHHHHHHhcCCCCHHHHHhccCHHHHHHHHhCCCCCCCCHHHHCCCCCHHHHHHHHHHhcCCccc
Confidence 000 00000000100000 000 0246788999999999999999
Q ss_pred CCCHHHHHHH
Q 014478 232 RPNAKSLVIS 241 (424)
Q Consensus 232 Rps~~~~~~~ 241 (424)
|||+++++++
T Consensus 353 R~ta~e~L~H 362 (432)
T 3n9x_A 353 RITIDQALDH 362 (432)
T ss_dssp SCCHHHHHTC
T ss_pred CCCHHHHhcC
Confidence 9999999875
|
| >1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.9e-41 Score=310.73 Aligned_cols=233 Identities=16% Similarity=0.163 Sum_probs=191.7
Q ss_pred CCCcccceeee--ecceecccccCCCc----------hhhhHHHHHHHHHhcCC-CcCcceeEEEEEeCCeeeEEEecCC
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESSD----------LGETLNLEEAKAVGNLR-SERLANLIGCCYEADERLLVAEFMP 68 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~~----------~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~~lv~e~~~ 68 (424)
|++|.||.+.+ .+..+++|++.... ...+.+.+|+++++++. ||||+++++++..+...++||||++
T Consensus 28 G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e~~~ 107 (298)
T 1phk_A 28 GVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMK 107 (298)
T ss_dssp CSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEEEECCT
T ss_pred CCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeeeccCCeEEEEEeccC
Confidence 89999999988 45678888775432 22467889999999995 9999999999999999999999999
Q ss_pred CCCHHhHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCC---Cccc
Q 014478 69 NETLAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG---KSYS 145 (424)
Q Consensus 69 ~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~---~~~~ 145 (424)
+++|.+++.. ...+++..++.++.||+.||.|||+++ ++||||||+||+++.++.+||+|||++...... ....
T Consensus 108 ~~~L~~~l~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~-i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~ 184 (298)
T 1phk_A 108 KGELFDYLTE--KVTLSEKETRKIMRALLEVICALHKLN-IVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLREVC 184 (298)
T ss_dssp TCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEECTTCCEEECCCTTCEECCTTCCBCCCC
T ss_pred CCcHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCCcceEEEcCCCcEEEecccchhhcCCCccccccc
Confidence 9999999965 457999999999999999999999999 999999999999999999999999998875543 3346
Q ss_pred cCccCCCccccc------cCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhcccC--CCCCchhHHHH
Q 014478 146 TNLAFTPPEYMR------TGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALE--GHFSNDEGTEL 217 (424)
Q Consensus 146 gt~~y~aPE~~~------~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l 217 (424)
+|+.|+|||++. ...++.++||||||+++|+|++|..||......... ..+...... ......++.++
T Consensus 185 ~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~l 260 (298)
T 1phk_A 185 GTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLML----RMIMSGNYQFGSPEWDDYSDTV 260 (298)
T ss_dssp SCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHH----HHHHHTCCCCCTTTGGGSCHHH
T ss_pred CCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCCcCccHHHHH----HHHhcCCcccCcccccccCHHH
Confidence 899999999985 346888999999999999999999888654222111 111111111 11224578899
Q ss_pred HHHHHHhcccCcCCCCCHHHHHHH
Q 014478 218 VRLASRCLQSEARERPNAKSLVIS 241 (424)
Q Consensus 218 ~~li~~cl~~dp~~Rps~~~~~~~ 241 (424)
.+++.+||+.||.+|||+.+++++
T Consensus 261 ~~li~~~l~~dp~~Rps~~~ll~h 284 (298)
T 1phk_A 261 KDLVSRFLVVQPQKRYTAEEALAH 284 (298)
T ss_dssp HHHHHHHCCSSGGGSCCHHHHTTS
T ss_pred HHHHHHHccCCcccCCCHHHHHhC
Confidence 999999999999999999999864
|
| >2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-40 Score=313.06 Aligned_cols=232 Identities=14% Similarity=0.135 Sum_probs=184.7
Q ss_pred CCCcccceeee--ecceecccccCCCc---------hhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCC
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESSD---------LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNE 70 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~~---------~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g 70 (424)
|+||.||.+.+ .+..|++|++.... .....+.+|++++++++||||+++++++..++ .++||||+++|
T Consensus 21 G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~-~~lv~e~~~~~ 99 (322)
T 2ycf_A 21 GACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAED-YYIVLELMEGG 99 (322)
T ss_dssp CSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEESSS-EEEEEECCTTE
T ss_pred CCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcCCc-eEEEEecCCCC
Confidence 89999999987 45678888775432 12346889999999999999999999987655 89999999999
Q ss_pred CHHhHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCC---eEEccccccccCCCCC---cc
Q 014478 71 TLAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGN---PRLSSFGLMKNSRDGK---SY 144 (424)
Q Consensus 71 sL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~---~kl~Dfg~~~~~~~~~---~~ 144 (424)
+|.+++.. ...+++..++.++.||+.||.|||+++ ++||||||+|||++.++. +||+|||+++...... ..
T Consensus 100 ~L~~~~~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~-ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~ 176 (322)
T 2ycf_A 100 ELFDKVVG--NKRLKEATCKLYFYQMLLAVQYLHENG-IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTL 176 (322)
T ss_dssp ETHHHHST--TCCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEESSSSSSCCEEECCCTTCEECCCCHHHHHH
T ss_pred cHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHHCC-eeccCCCHHHEEEecCCCCCeEEEccCccceecccccccccc
Confidence 99999864 567999999999999999999999999 999999999999987654 9999999998765442 34
Q ss_pred ccCccCCCccccc---cCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhcccCCCC---CchhHHHHH
Q 014478 145 STNLAFTPPEYMR---TGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHF---SNDEGTELV 218 (424)
Q Consensus 145 ~gt~~y~aPE~~~---~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~l~ 218 (424)
.||+.|+|||++. ...++.++|||||||++|+|++|..||...... ......+........ ...++.++.
T Consensus 177 ~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (322)
T 2ycf_A 177 CGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQ----VSLKDQITSGKYNFIPEVWAEVSEKAL 252 (322)
T ss_dssp HSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTTCS----SCHHHHHHHTCCCCCHHHHTTSCHHHH
T ss_pred cCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchH----HHHHHHHHhCccccCchhhhhcCHHHH
Confidence 6899999999974 456889999999999999999999888653211 011111111111111 124577899
Q ss_pred HHHHHhcccCcCCCCCHHHHHHH
Q 014478 219 RLASRCLQSEARERPNAKSLVIS 241 (424)
Q Consensus 219 ~li~~cl~~dp~~Rps~~~~~~~ 241 (424)
++|.+||..||++|||+.+++++
T Consensus 253 ~li~~~l~~dP~~Rps~~~~l~h 275 (322)
T 2ycf_A 253 DLVKKLLVVDPKARFTTEEALRH 275 (322)
T ss_dssp HHHHHHSCSSTTTSCCHHHHHTS
T ss_pred HHHHHHcccCHhhCCCHHHHhhC
Confidence 99999999999999999999875
|
| >3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A | Back alignment and structure |
|---|
Probab=100.00 E-value=5.9e-41 Score=343.10 Aligned_cols=231 Identities=18% Similarity=0.267 Sum_probs=195.1
Q ss_pred CCCcccceeee--ecceecccccCCC----chhhhHHHHHHHHHhcC-CCcCcceeEEEEEeCCeeeEEEecCCCCCHHh
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESS----DLGETLNLEEAKAVGNL-RSERLANLIGCCYEADERLLVAEFMPNETLAK 74 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~----~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~ 74 (424)
|+||.||.+.+ .+..+++|++... ......+..|..+|..+ +||||+++++++.+.+..||||||++||+|.+
T Consensus 352 G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~~~~lV~E~~~gg~L~~ 431 (674)
T 3pfq_A 352 GSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMY 431 (674)
T ss_dssp TTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSSEEEEEEECCCSCBHHH
T ss_pred CCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCCEEEEEEeCcCCCcHHH
Confidence 89999999988 4556888887543 23456788899999998 79999999999999999999999999999999
Q ss_pred HhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCC----CCccccCccC
Q 014478 75 HLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRD----GKSYSTNLAF 150 (424)
Q Consensus 75 ~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~----~~~~~gt~~y 150 (424)
++.. ...+++.+++.++.||+.||.|||+++ ||||||||+|||++.+|.+||+|||+++.... .....||+.|
T Consensus 432 ~l~~--~~~~~~~~~~~~~~qi~~aL~~LH~~g-IiHrDLKp~NILl~~~g~ikL~DFGla~~~~~~~~~~~~~~GT~~Y 508 (674)
T 3pfq_A 432 HIQQ--VGRFKEPHAVFYAAEIAIGLFFLQSKG-IIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKTFCGTPDY 508 (674)
T ss_dssp HHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTS-EECCCCCSTTEEECSSSCEEECCCTTCEECCCTTCCBCCCCSCSSS
T ss_pred HHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCC-eEeccCChhhEEEcCCCcEEEeecceeeccccCCcccccccCCCcc
Confidence 9975 357999999999999999999999999 99999999999999999999999999986432 2346799999
Q ss_pred CCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHHHHHHHHHhcccCcC
Q 014478 151 TPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEAR 230 (424)
Q Consensus 151 ~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~ 230 (424)
+|||++.+..++.++|||||||++|||++|..||........ ...+... ...+|..+++++.+||.+||+.||+
T Consensus 509 ~APE~l~~~~~~~~~DvwSlGvilyelltG~~Pf~~~~~~~~----~~~i~~~--~~~~p~~~s~~~~~li~~lL~~dP~ 582 (674)
T 3pfq_A 509 IAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDEL----FQSIMEH--NVAYPKSMSKEAVAICKGLMTKHPG 582 (674)
T ss_dssp CCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH----HHHHHSS--CCCCCTTSCHHHHHHHHHHSCSSST
T ss_pred cCHhhhcCCCCCccceEechHHHHHHHHcCCCCCCCCCHHHH----HHHHHhC--CCCCCccCCHHHHHHHHHHccCCHH
Confidence 999999999999999999999999999999999886532211 1222222 2345667889999999999999999
Q ss_pred CCCCH-----HHHHHH
Q 014478 231 ERPNA-----KSLVIS 241 (424)
Q Consensus 231 ~Rps~-----~~~~~~ 241 (424)
+||++ ++|+++
T Consensus 583 ~R~~~~~~~~~ei~~h 598 (674)
T 3pfq_A 583 KRLGCGPEGERDIKEH 598 (674)
T ss_dssp TCTTCSTTHHHHHHSS
T ss_pred HCCCCCCCcHHHHhcC
Confidence 99997 676654
|
| >3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A | Back alignment and structure |
|---|
Probab=100.00 E-value=5.2e-41 Score=310.25 Aligned_cols=236 Identities=15% Similarity=0.210 Sum_probs=179.6
Q ss_pred CCCcccceeee--ecceecccccCCCc--h-hhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHhHh
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESSD--L-GETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHL 76 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~~--~-~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~l 76 (424)
|++|.||.+.+ .+..+++|++.... . ....+.++...++.++||||+++++++..++..++||||+++ +|.+++
T Consensus 18 G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~~~~lv~e~~~~-~l~~~l 96 (290)
T 3fme_A 18 GAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICMELMDT-SLDKFY 96 (290)
T ss_dssp CSSEEEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSSEEEEEECCSE-EHHHHH
T ss_pred CCCeEEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeeeccCCEEEEEehhcc-chHHHH
Confidence 89999999988 67778888876442 2 233444555668888999999999999999999999999975 887776
Q ss_pred ccC--CCCCCCHHHHHHHHHHHHHHHHHHHhC-CCcccccCCCCCeeecCCCCeEEccccccccCCCC---CccccCccC
Q 014478 77 FHW--ETQPMKWAMRLRVALYLAQALEYCSSK-GRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG---KSYSTNLAF 150 (424)
Q Consensus 77 ~~~--~~~~l~~~~~~~i~~qi~~~L~~lH~~-~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~---~~~~gt~~y 150 (424)
... .+..+++..++.++.|++.||.|||++ + ++||||||+||+++.++.+||+|||+++..... ....||+.|
T Consensus 97 ~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~-i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~t~~y 175 (290)
T 3fme_A 97 KQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLS-VIHRDVKPSNVLINALGQVKMCDFGISGYLVDDVAKDIDAGCKPY 175 (290)
T ss_dssp HHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHSC-CCCCCCSGGGCEECTTCCEEBCCC---------------CCCCCC
T ss_pred HHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcCC-eecCCCCHHHEEECCCCCEEEeecCCcccccccccccccCCCccc
Confidence 431 356799999999999999999999998 9 999999999999999999999999998765443 234689999
Q ss_pred CCcccc----ccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHHHHHHHHHhcc
Q 014478 151 TPPEYM----RTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQ 226 (424)
Q Consensus 151 ~aPE~~----~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~ 226 (424)
+|||++ .+..++.++|||||||++|+|++|..||...... ................+..+++++.+++.+||+
T Consensus 176 ~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~ 252 (290)
T 3fme_A 176 MAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTP---FQQLKQVVEEPSPQLPADKFSAEFVDFTSQCLK 252 (290)
T ss_dssp SCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCCCSCH---HHHHHHHHHSCCCCCCTTTSCHHHHHHHHHHTC
T ss_pred cChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccccCch---HHHHHHHhccCCCCcccccCCHHHHHHHHHHhh
Confidence 999996 4556889999999999999999999888642111 111222222333333344678899999999999
Q ss_pred cCcCCCCCHHHHHHHH
Q 014478 227 SEARERPNAKSLVISL 242 (424)
Q Consensus 227 ~dp~~Rps~~~~~~~l 242 (424)
.||++|||+.+++++-
T Consensus 253 ~~p~~Rpt~~e~l~hp 268 (290)
T 3fme_A 253 KNSKERPTYPELMQHP 268 (290)
T ss_dssp SSGGGSCCHHHHTTSH
T ss_pred cChhhCcCHHHHHhCc
Confidence 9999999999999853
|
| >3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-40 Score=312.57 Aligned_cols=232 Identities=16% Similarity=0.183 Sum_probs=186.9
Q ss_pred CCCcccceeee--ecceecccccCCCchhhhHHHHHHHHHhcCC-CcCcceeEEEEEe--CCeeeEEEecCCCCCHHhHh
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESSDLGETLNLEEAKAVGNLR-SERLANLIGCCYE--ADERLLVAEFMPNETLAKHL 76 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~--~~~~~lv~e~~~~gsL~~~l 76 (424)
|++|.||.+.+ .+..+++|++.... .+.+.+|++++++++ ||||+++++++.. ....++||||+++++|.+++
T Consensus 47 G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~ 124 (330)
T 3nsz_A 47 GKYSEVFEAINITNNEKVVVKILKPVK--KKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVFEHVNNTDFKQLY 124 (330)
T ss_dssp CSSEEEEEEEETTTCCEEEEEEECSCC--HHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCEEEEEECCCCCCHHHHG
T ss_pred cCCeEEEEEEECCCCcEEEEEEecccc--hHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCceEEEEeccCchhHHHHH
Confidence 89999999976 56778888876443 567899999999997 9999999999987 56789999999999999988
Q ss_pred ccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCC-CeEEccccccccCCCC---CccccCccCCC
Q 014478 77 FHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDG-NPRLSSFGLMKNSRDG---KSYSTNLAFTP 152 (424)
Q Consensus 77 ~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~-~~kl~Dfg~~~~~~~~---~~~~gt~~y~a 152 (424)
. .+++.++..++.|++.||.|||+++ |+||||||+|||++.++ .+||+|||+++..... ....+|..|+|
T Consensus 125 ~-----~~~~~~~~~~~~qi~~~l~~lH~~~-ivH~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~y~a 198 (330)
T 3nsz_A 125 Q-----TLTDYDIRFYMYEILKALDYCHSMG-IMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKG 198 (330)
T ss_dssp G-----GCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEEETTTTEEEECCCTTCEECCTTCCCCSCCSCGGGCC
T ss_pred H-----hCCHHHHHHHHHHHHHHHHHHHhCC-eeeCCCCHHHEEEcCCCCEEEEEeCCCceEcCCCCccccccccccccC
Confidence 4 3899999999999999999999999 99999999999999777 7999999999865433 34568899999
Q ss_pred cccccc-CCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhh---------hhhhHhh---------------------
Q 014478 153 PEYMRT-GRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRS---------KNFLLLM--------------------- 201 (424)
Q Consensus 153 PE~~~~-~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~---------~~~~~~~--------------------- 201 (424)
||.+.+ ..++.++|||||||++|+|++|..||.......... ......+
T Consensus 199 PE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (330)
T 3nsz_A 199 PELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRK 278 (330)
T ss_dssp HHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTCCCCTHHHHHHCCCCCC
T ss_pred hhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCcccCCchHHHHHHHHHhcCCchhhhHHHHhccccccchhhhhhhcccc
Confidence 999987 568999999999999999999998874321110000 0000000
Q ss_pred --hcccCCCCCchhHHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 014478 202 --DSALEGHFSNDEGTELVRLASRCLQSEARERPNAKSLVIS 241 (424)
Q Consensus 202 --~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~~~~~ 241 (424)
........+..+++++.+||.+||+.||++|||+++++++
T Consensus 279 ~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~h 320 (330)
T 3nsz_A 279 RWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEH 320 (330)
T ss_dssp CGGGGCCTTTGGGCCHHHHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred chhhhccccccccCCHHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence 0011112223368899999999999999999999999865
|
| >2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=3.7e-41 Score=321.29 Aligned_cols=235 Identities=16% Similarity=0.193 Sum_probs=172.8
Q ss_pred CCCcccceeee--ecceecccccCCC---chhhhHHHHHHHHHhcCCCcCcceeEEEEEeC------CeeeEEEecCCCC
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESS---DLGETLNLEEAKAVGNLRSERLANLIGCCYEA------DERLLVAEFMPNE 70 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~---~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~------~~~~lv~e~~~~g 70 (424)
|++|.||.+.+ .+..|++|++... ....+.+.+|+++++.++||||+++++++... ...++|||++ ++
T Consensus 40 G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~~~~lv~e~~-~~ 118 (367)
T 2fst_X 40 GAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GA 118 (367)
T ss_dssp ---CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCCCCEEEEECC-CE
T ss_pred cCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccccCCeEEEEeccc-CC
Confidence 89999999976 5677888887543 23467888999999999999999999999754 4579999999 77
Q ss_pred CHHhHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCC-CccccCcc
Q 014478 71 TLAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG-KSYSTNLA 149 (424)
Q Consensus 71 sL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~-~~~~gt~~ 149 (424)
+|.+++. ...+++..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++..... ....||+.
T Consensus 119 ~L~~~~~---~~~l~~~~~~~i~~qi~~aL~~LH~~g-ivH~Dlkp~NIll~~~~~~kL~DFG~a~~~~~~~~~~~~t~~ 194 (367)
T 2fst_X 119 DLNNIVK---CQKLTDDHVQFLIYQILRGLKYIHSAD-IIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYVATRW 194 (367)
T ss_dssp ECC--------CCCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEECTTCCEEECC---------------CCCT
T ss_pred CHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCC-eeeCCCCHhhEEECCCCCEEEeeccccccccccCCCcCcCcC
Confidence 9999885 357999999999999999999999999 999999999999999999999999999875533 44578999
Q ss_pred CCCcccccc-CCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhh-------------------hHhhhcccCC-C
Q 014478 150 FTPPEYMRT-GRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNF-------------------LLLMDSALEG-H 208 (424)
Q Consensus 150 y~aPE~~~~-~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~-------------------~~~~~~~~~~-~ 208 (424)
|+|||++.+ ..++.++|||||||++|||++|+.||+.......-.... .......... .
T Consensus 195 y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (367)
T 2fst_X 195 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPK 274 (367)
T ss_dssp TCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHTTCCCHHHHHHHHTSCCCCC
T ss_pred ccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHhhhHHHHHHHhccCCCCC
Confidence 999999986 578999999999999999999999987642211110000 0000000000 0
Q ss_pred -----CCchhHHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 014478 209 -----FSNDEGTELVRLASRCLQSEARERPNAKSLVIS 241 (424)
Q Consensus 209 -----~~~~~~~~l~~li~~cl~~dp~~Rps~~~~~~~ 241 (424)
.....++++.+||.+||..||++|||+.+++.+
T Consensus 275 ~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~t~~e~L~h 312 (367)
T 2fst_X 275 MNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH 312 (367)
T ss_dssp CCHHHHTTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred CCHHHHCCCCCHHHHHHHHHhCCCCcccCcCHHHHhcC
Confidence 012346789999999999999999999999865
|
| >3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.5e-41 Score=316.22 Aligned_cols=238 Identities=13% Similarity=0.125 Sum_probs=167.2
Q ss_pred CCCcccceeeee--cceecccccCCCchhhhHHHHHHHHHhcCCCcCcceeEEEEEe----CCeeeEEEecCCCCCHHhH
Q 014478 2 GGRCSKFSICWF--HCHLKSSVLESSDLGETLNLEEAKAVGNLRSERLANLIGCCYE----ADERLLVAEFMPNETLAKH 75 (424)
Q Consensus 2 G~~g~v~~~~~~--~~~v~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~----~~~~~lv~e~~~~gsL~~~ 75 (424)
|++|.||.+.+. +..+++|++........ +....++.+.||||+++++++.. +...++||||++||+|.++
T Consensus 40 G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~---e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~e~~~gg~L~~~ 116 (336)
T 3fhr_A 40 GVNGKVLECFHRRTGQKCALKLLYDSPKARQ---EVDHHWQASGGPHIVCILDVYENMHHGKRCLLIIMECMEGGELFSR 116 (336)
T ss_dssp ETTEEEEEEEETTTCCEEEEEEEESSHHHHH---HHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEEECCTTEEHHHH
T ss_pred CCCeEEEEEEECCCCCEEEEEEecCcHHHHH---HHHHHHHhcCCCChHHHHHHHhhccCCCceEEEEEeccCCCCHHHH
Confidence 899999999884 77888888865543322 22334566699999999999976 3457899999999999999
Q ss_pred hccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecC---CCCeEEccccccccCCCC--CccccCccC
Q 014478 76 LFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDK---DGNPRLSSFGLMKNSRDG--KSYSTNLAF 150 (424)
Q Consensus 76 l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~---~~~~kl~Dfg~~~~~~~~--~~~~gt~~y 150 (424)
+.......+++.+++.++.|++.||.|||+++ |+||||||+|||++. ++.+||+|||+++..... ....+|+.|
T Consensus 117 l~~~~~~~l~~~~~~~i~~ql~~~l~~LH~~~-ivH~dlkp~NIll~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~t~~y 195 (336)
T 3fhr_A 117 IQERGDQAFTEREAAEIMRDIGTAIQFLHSHN-IAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQNALQTPCYTPYY 195 (336)
T ss_dssp HHTC-CCCCBHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEESCSSTTCCEEECCCTTCEEC--------------
T ss_pred HHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCCHHHEEEEecCCCceEEEeccccceeccccccccCCCCcCc
Confidence 97655567999999999999999999999999 999999999999976 455999999999865533 345689999
Q ss_pred CCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhh--hcccCCCCCchhHHHHHHHHHHhcccC
Q 014478 151 TPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLM--DSALEGHFSNDEGTELVRLASRCLQSE 228 (424)
Q Consensus 151 ~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~li~~cl~~d 228 (424)
+|||++.+..++.++|||||||++|+|++|..||................. ...........+++++.+||.+||+.|
T Consensus 196 ~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~d 275 (336)
T 3fhr_A 196 VAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLGQYGFPNPEWSEVSEDAKQLIRLLLKTD 275 (336)
T ss_dssp --------CHHHHHHHHHHHHHHHHHHHHSSCCC---------------------CCCTTTSTTCCHHHHHHHHHHSCSS
T ss_pred cChhhhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCccchhhhhhHHHhhhccccccCchhhccCCHHHHHHHHHHCCCC
Confidence 999999888899999999999999999999988865432222111111111 111122222457889999999999999
Q ss_pred cCCCCCHHHHHHHHH
Q 014478 229 ARERPNAKSLVISLM 243 (424)
Q Consensus 229 p~~Rps~~~~~~~l~ 243 (424)
|.+|||+.+++++-.
T Consensus 276 P~~Rpt~~ell~hp~ 290 (336)
T 3fhr_A 276 PTERLTITQFMNHPW 290 (336)
T ss_dssp GGGSCCHHHHHHSHH
T ss_pred hhHCcCHHHHhcCcc
Confidence 999999999998643
|
| >1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A | Back alignment and structure |
|---|
Probab=100.00 E-value=5.9e-41 Score=321.19 Aligned_cols=238 Identities=15% Similarity=0.218 Sum_probs=192.0
Q ss_pred CCCcccceeee--ecceecccccCCCchhhhHHHHHHHHHhcCC-----------CcCcceeEEEEEeCC----eeeEEE
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESSDLGETLNLEEAKAVGNLR-----------SERLANLIGCCYEAD----ERLLVA 64 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~~~~~~~~~~E~~~l~~l~-----------h~~iv~~~~~~~~~~----~~~lv~ 64 (424)
|+||.||.+.+ .+..|++|++.........+.+|++++++++ ||||+++++++.... ..++||
T Consensus 30 G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~lv~ 109 (373)
T 1q8y_A 30 GHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNHKGPNGVHVVMVF 109 (373)
T ss_dssp CSSEEEEEEEETTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEEEEETTEEEEEEEE
T ss_pred cCCeEEEEEEecCCCcEEEEEEecCCccchhhhhHHHHHHHHhhcccccchhccccchHHHHHHHhhccCCCCceEEEEE
Confidence 89999999986 6778899998877767788899999999986 899999999998654 678999
Q ss_pred ecCCCCCHHhHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhC-CCcccccCCCCCeeec------CCCCeEEcccccccc
Q 014478 65 EFMPNETLAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSK-GRALYHDLNAYRILFD------KDGNPRLSSFGLMKN 137 (424)
Q Consensus 65 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~-~~ivH~dikp~Nill~------~~~~~kl~Dfg~~~~ 137 (424)
||+ +++|.+++.......+++..++.++.||+.||.|||++ + |+||||||+|||++ .++.+||+|||+++.
T Consensus 110 e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~~-ivH~Dikp~NIll~~~~~~~~~~~~kl~Dfg~a~~ 187 (373)
T 1q8y_A 110 EVL-GENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCG-IIHTDIKPENVLMEIVDSPENLIQIKIADLGNACW 187 (373)
T ss_dssp CCC-CEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTC-EECSCCSGGGEEEEEEETTTTEEEEEECCCTTCEE
T ss_pred ecC-CCCHHHHHHHhhccCCcHHHHHHHHHHHHHHHHHHHhcCC-EEecCCChHHeEEeccCCCcCcceEEEcccccccc
Confidence 999 88999999765566799999999999999999999998 9 99999999999994 344799999999986
Q ss_pred CCCC-CccccCccCCCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHh--hhhhhHhhh------------
Q 014478 138 SRDG-KSYSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIR--SKNFLLLMD------------ 202 (424)
Q Consensus 138 ~~~~-~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~--~~~~~~~~~------------ 202 (424)
.... ....||+.|+|||++.+..++.++|||||||++|||++|..||......... ......+..
T Consensus 188 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~ 267 (373)
T 1q8y_A 188 YDEHYTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIELLGELPSYLLRN 267 (373)
T ss_dssp TTBCCCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------CHHHHHHHHHHHHCSCCHHHHHH
T ss_pred cCCCCCCCCCCccccCcHHHhCCCCCchHhHHHHHHHHHHHHhCCCCCCCCcccccCChHHHHHHHHHhcCCCCHHHHhc
Confidence 6543 4457899999999999888999999999999999999999888753211100 000000000
Q ss_pred ----------------------------cccCCCCCchhHHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 014478 203 ----------------------------SALEGHFSNDEGTELVRLASRCLQSEARERPNAKSLVIS 241 (424)
Q Consensus 203 ----------------------------~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~~~~~ 241 (424)
.......+..++.++.+||.+||+.||++|||+++++++
T Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 334 (373)
T 1q8y_A 268 GKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGLVNH 334 (373)
T ss_dssp CTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBCHHHHHTC
T ss_pred cchhhhhcCCcchhcccccccccchhhhhhhcccCCcchHHHHHHHHHHHhccCccccCCHHHHhhC
Confidence 001123456778999999999999999999999999875
|
| >4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-40 Score=318.11 Aligned_cols=234 Identities=16% Similarity=0.194 Sum_probs=184.9
Q ss_pred CCCcccceeee--ecceecccccCCC---chhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCee------eEEEecCCCC
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESS---DLGETLNLEEAKAVGNLRSERLANLIGCCYEADER------LLVAEFMPNE 70 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~---~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~------~lv~e~~~~g 70 (424)
|++|.||.+.+ .+..|++|++... ....+.+.+|+.+++.++||||+++++++...+.. ++||||+. +
T Consensus 53 G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~~lv~e~~~-~ 131 (371)
T 4exu_A 53 GAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYDFYLVMPFMQ-T 131 (371)
T ss_dssp CSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTTCCCCEEEEECCC-E
T ss_pred CCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCcccceeEEEEEcccc-c
Confidence 89999999987 5677888887653 23357888999999999999999999999877654 99999997 5
Q ss_pred CHHhHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCC-CccccCcc
Q 014478 71 TLAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG-KSYSTNLA 149 (424)
Q Consensus 71 sL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~-~~~~gt~~ 149 (424)
+|.+++ ...+++..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++..... ....||+.
T Consensus 132 ~l~~~~----~~~~~~~~~~~i~~qi~~aL~~LH~~~-ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~~~~~~~~~~t~~ 206 (371)
T 4exu_A 132 DLQKIM----GMEFSEEKIQYLVYQMLKGLKYIHSAG-VVHRDLKPGNLAVNEDCELKILDFGLARHADAEMTGYVVTRW 206 (371)
T ss_dssp EHHHHT----TSCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEECTTCCEEECSTTCC--------CTTCCCT
T ss_pred cHHHHh----hcCCCHHHHHHHHHHHHHHHHHHHHCC-CcCCCcCHHHeEECCCCCEEEEecCcccccccCcCCcccCcc
Confidence 998887 345999999999999999999999999 999999999999999999999999999866543 34578999
Q ss_pred CCCcccccc-CCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhh-------------------HhhhcccCCC-
Q 014478 150 FTPPEYMRT-GRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFL-------------------LLMDSALEGH- 208 (424)
Q Consensus 150 y~aPE~~~~-~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~-------------------~~~~~~~~~~- 208 (424)
|+|||++.+ ..++.++|||||||++|+|++|+.||.............. ..........
T Consensus 207 y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (371)
T 4exu_A 207 YRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKAAKSYIQSLPQTPR 286 (371)
T ss_dssp TSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHTTCSCHHHHHHHHHSCCCCC
T ss_pred ccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCcHHHHHHhhhhhhhhhhhccCCCcc
Confidence 999999987 6789999999999999999999988876422111111000 0000000000
Q ss_pred -----CCchhHHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 014478 209 -----FSNDEGTELVRLASRCLQSEARERPNAKSLVIS 241 (424)
Q Consensus 209 -----~~~~~~~~l~~li~~cl~~dp~~Rps~~~~~~~ 241 (424)
....+++++.+||.+||+.||++|||+.+++++
T Consensus 287 ~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 324 (371)
T 4exu_A 287 KDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTH 324 (371)
T ss_dssp CCHHHHSTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred hhHHHhccccChHHHHHHHHHCCCChhhcCCHHHHhcC
Confidence 112457889999999999999999999999865
|
| >3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=7.6e-41 Score=319.38 Aligned_cols=235 Identities=17% Similarity=0.185 Sum_probs=186.6
Q ss_pred CCCcccceeee--ecceecccccCCCc--hhhhHHHHHHHHHhcCCCcCcceeEEEEEeC-----CeeeEEEecCCCCCH
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESSD--LGETLNLEEAKAVGNLRSERLANLIGCCYEA-----DERLLVAEFMPNETL 72 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~~--~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~-----~~~~lv~e~~~~gsL 72 (424)
|++|.||.+.+ .+..|++|++.... ...+.+.+|++++++++||||+++++++... ...++||||+.+ +|
T Consensus 38 G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~iv~e~~~~-~L 116 (364)
T 3qyz_A 38 GAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMET-DL 116 (364)
T ss_dssp CSSEEEEEEEETTTTEEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCCEEEEEECCSE-EH
T ss_pred CCCeEEEEEEECCCCeEEEEEEeccccCcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCccccceEEEEEcccCc-CH
Confidence 89999999987 46668888876433 3357889999999999999999999999765 357999999975 99
Q ss_pred HhHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCC-------Cccc
Q 014478 73 AKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG-------KSYS 145 (424)
Q Consensus 73 ~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~-------~~~~ 145 (424)
.+++.. ..+++.+++.++.|++.||.|||+++ |+||||||+|||++.++.+||+|||+++..... ....
T Consensus 117 ~~~l~~---~~~~~~~~~~i~~qi~~aL~~LH~~~-ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~ 192 (364)
T 3qyz_A 117 YKLLKT---QHLSNDHICYFLYQILRGLKYIHSAN-VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYV 192 (364)
T ss_dssp HHHHHH---CCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEECTTCCEEECCCTTCEECCGGGCBCCTTCCCC
T ss_pred HHHHHh---CCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCChHhEEECCCCCEEEEeCcceEecCCCCCccccccccc
Confidence 999853 56999999999999999999999999 999999999999999999999999999865432 3347
Q ss_pred cCccCCCccccccC-CCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhh-------------------Hhhhccc
Q 014478 146 TNLAFTPPEYMRTG-RVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFL-------------------LLMDSAL 205 (424)
Q Consensus 146 gt~~y~aPE~~~~~-~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~-------------------~~~~~~~ 205 (424)
||+.|+|||++.+. .++.++|||||||++|+|++|+.||.............. .......
T Consensus 193 gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (364)
T 3qyz_A 193 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLP 272 (364)
T ss_dssp SCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCCSSGGGHHHHHHHHHCSCCHHHHHTCCCHHHHHHHHTSC
T ss_pred cccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhhhhhHHHHHHhcC
Confidence 89999999987654 489999999999999999999988876421111110000 0000000
Q ss_pred -CCC-----CCchhHHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 014478 206 -EGH-----FSNDEGTELVRLASRCLQSEARERPNAKSLVIS 241 (424)
Q Consensus 206 -~~~-----~~~~~~~~l~~li~~cl~~dp~~Rps~~~~~~~ 241 (424)
... ....+++++.+||.+||+.||++|||+.+++++
T Consensus 273 ~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 314 (364)
T 3qyz_A 273 HKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAH 314 (364)
T ss_dssp CCCCCCHHHHCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred CccCCCHHHhCCCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 000 113456789999999999999999999999865
|
| >3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.4e-41 Score=320.92 Aligned_cols=235 Identities=17% Similarity=0.190 Sum_probs=183.9
Q ss_pred CCCcccceeee--ecceecccccCCCchhhhHHHHHHHHHhcCCCcCcceeEEEEEeC----------------------
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESSDLGETLNLEEAKAVGNLRSERLANLIGCCYEA---------------------- 57 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~---------------------- 57 (424)
|+||.||.+.+ .+..|++|++..+.. ...+|+++++.++||||+++++++...
T Consensus 18 G~fg~V~~a~~~~~~~~vAiK~~~~~~~---~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (383)
T 3eb0_A 18 GSFGIVCEVFDIESGKRFALKKVLQDPR---YKNRELDIMKVLDHVNIIKLVDYFYTTGDEEPKPPQPPDDHNKLGGKNN 94 (383)
T ss_dssp C-CEEEEEEEETTTCCEEEEEEEECCTT---SCCHHHHHHTTCCCTTBCCEEEEEEEC----------------------
T ss_pred ccCEEEEEEEECCCCCEEEEEEEecCcc---hHHHHHHHHHHcCCCCccchhheeeecCccccccccccccccccccccc
Confidence 89999999987 667888887755432 334799999999999999999998543
Q ss_pred ----------------CeeeEEEecCCCCCHHhHhcc--CCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCe
Q 014478 58 ----------------DERLLVAEFMPNETLAKHLFH--WETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRI 119 (424)
Q Consensus 58 ----------------~~~~lv~e~~~~gsL~~~l~~--~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Ni 119 (424)
...++||||+++ +|.+.+.. ..+..+++..+..++.||+.||.|||+++ |+||||||+||
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~lv~e~~~~-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~g-i~H~Dikp~Ni 172 (383)
T 3eb0_A 95 GVNNHHKSVIVNPSQNKYLNVIMEYVPD-TLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIHSLG-ICHRDIKPQNL 172 (383)
T ss_dssp ---------------CCEEEEEECCCSE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTTT-EECSCCCGGGE
T ss_pred ccccccccccccCCCceEEEEEEecCCc-cHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCc-CccCccCHHHE
Confidence 337899999985 87777642 13568999999999999999999999999 99999999999
Q ss_pred eec-CCCCeEEccccccccCCCC---CccccCccCCCccccccC-CCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhh
Q 014478 120 LFD-KDGNPRLSSFGLMKNSRDG---KSYSTNLAFTPPEYMRTG-RVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRS 194 (424)
Q Consensus 120 ll~-~~~~~kl~Dfg~~~~~~~~---~~~~gt~~y~aPE~~~~~-~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~ 194 (424)
|++ .++.+||+|||+++..... ....+|+.|+|||.+.+. .++.++|||||||++|||++|+.||........-.
T Consensus 173 l~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~ 252 (383)
T 3eb0_A 173 LVNSKDNTLKLCDFGSAKKLIPSEPSVAYICSRFYRAPELMLGATEYTPSIDLWSIGCVFGELILGKPLFSGETSIDQLV 252 (383)
T ss_dssp EEETTTTEEEECCCTTCEECCTTSCCCCCCCCSSCCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHH
T ss_pred EEcCCCCcEEEEECCCCcccCCCCCCcCcccCCCccCHHHhcCCCCCCcchhhhhHHHHHHHHHhCCCCCCCCChHHHHH
Confidence 997 6889999999999865433 345689999999998865 48999999999999999999998887642221111
Q ss_pred hhhhHh----------hhc-------------ccCCCCCchhHHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 014478 195 KNFLLL----------MDS-------------ALEGHFSNDEGTELVRLASRCLQSEARERPNAKSLVIS 241 (424)
Q Consensus 195 ~~~~~~----------~~~-------------~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~~~~~ 241 (424)
...... ..+ ......+..+++++.+||.+||+.||.+|||+.+++++
T Consensus 253 ~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 322 (383)
T 3eb0_A 253 RIIQIMGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKILPEGTPSLAIDLLEQILRYEPDLRINPYEAMAH 322 (383)
T ss_dssp HHHHHHCCCCHHHHHHHCTTC--CCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred HHHHHhCCCCHHHHHHhCcccccccCCccCcccHHhhCCCCCCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 110000 000 00011334567889999999999999999999999975
|
| >3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.3e-40 Score=313.69 Aligned_cols=238 Identities=16% Similarity=0.147 Sum_probs=182.7
Q ss_pred CCCcccceeee--ecceecccccCCCchhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCe-------eeEEEecCCCCCH
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESSDLGETLNLEEAKAVGNLRSERLANLIGCCYEADE-------RLLVAEFMPNETL 72 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~-------~~lv~e~~~~gsL 72 (424)
|+||.||.+.+ .+..+++|++..+......+.+|++.+..++||||+++++++..... .++||||+++ +|
T Consensus 34 G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~~~lv~e~~~~-~l 112 (360)
T 3e3p_A 34 GTFGTVQLGKEKSTGMSVAIKKVIQDPRFRNRELQIMQDLAVLHHPNIVQLQSYFYTLGERDRRDIYLNVVMEYVPD-TL 112 (360)
T ss_dssp -----CEEEEETTTCCEEEEEEEECCTTCCCHHHHHHHHHHHHCCTTBCCEEEEEEEECSSCTTCEEEEEEEECCSC-BH
T ss_pred CCCeEEEEEEECCCCCEEEEEEEecCccccHHHHHHHHHHHhcCCCCcccHHHhhhccccccccceeEEEEeecccc-cH
Confidence 89999999987 46778888887666666778889999999999999999999976443 7899999987 55
Q ss_pred HhHhcc--CCCCCCCHHHHHHHHHHHHHHHHHHH--hCCCcccccCCCCCeeecC-CCCeEEccccccccCCCC---Ccc
Q 014478 73 AKHLFH--WETQPMKWAMRLRVALYLAQALEYCS--SKGRALYHDLNAYRILFDK-DGNPRLSSFGLMKNSRDG---KSY 144 (424)
Q Consensus 73 ~~~l~~--~~~~~l~~~~~~~i~~qi~~~L~~lH--~~~~ivH~dikp~Nill~~-~~~~kl~Dfg~~~~~~~~---~~~ 144 (424)
...+.. .....+++..+..++.|++.||.||| +++ |+||||||+|||++. ++.+||+|||+++..... ...
T Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~~-ivH~Dlkp~NIll~~~~~~~kl~Dfg~a~~~~~~~~~~~~ 191 (360)
T 3e3p_A 113 HRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLPSVN-VCHRDIKPHNVLVNEADGTLKLCDFGSAKKLSPSEPNVAY 191 (360)
T ss_dssp HHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHTSTTTC-CBCSCCCGGGEEEETTTTEEEECCCTTCBCCCTTSCCCST
T ss_pred HHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhCCCCC-eecCcCCHHHEEEeCCCCcEEEeeCCCceecCCCCCcccc
Confidence 444321 13567899999999999999999999 999 999999999999986 899999999999876543 345
Q ss_pred ccCccCCCccccccCC-CCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhH-------h---hh-----------
Q 014478 145 STNLAFTPPEYMRTGR-VTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLL-------L---MD----------- 202 (424)
Q Consensus 145 ~gt~~y~aPE~~~~~~-~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~-------~---~~----------- 202 (424)
.||+.|+|||++.+.. ++.++|||||||++|+|++|+.||............... . ..
T Consensus 192 ~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (360)
T 3e3p_A 192 ICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQLHEIVRVLGCPSREVLRKLNPSHTDVDLYNS 271 (360)
T ss_dssp TSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCTTCCCGGGGCC
T ss_pred cCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCcCCCChHHHHHHHHHHcCCCCHHHHHhcccchhhcccccc
Confidence 6899999999987654 899999999999999999999888764322111111100 0 00
Q ss_pred -----cccCCCCCchhHHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 014478 203 -----SALEGHFSNDEGTELVRLASRCLQSEARERPNAKSLVIS 241 (424)
Q Consensus 203 -----~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~~~~~ 241 (424)
.......+...++++.+||.+||+.||.+|||+.+++++
T Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 315 (360)
T 3e3p_A 272 KGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALCH 315 (360)
T ss_dssp CCCCHHHHTTTCCCTTHHHHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred ccCCcccccchhhccccHHHHHHHHHHhccCccccCCHHHHhcC
Confidence 000112223367899999999999999999999999865
|
| >1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-40 Score=321.58 Aligned_cols=235 Identities=21% Similarity=0.203 Sum_probs=182.3
Q ss_pred CCCcccceeee--ecceecccccCCCchhhhHHHHHHHHHhcCCCcCcceeEEEEEeC----C--eeeEEEecCCCCCHH
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESSDLGETLNLEEAKAVGNLRSERLANLIGCCYEA----D--ERLLVAEFMPNETLA 73 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~----~--~~~lv~e~~~~gsL~ 73 (424)
|+||.||.+.+ .+..|++|++.... ..+.+|+++|+.++||||++++++|... + ..++||||+++ +|.
T Consensus 65 G~fg~Vy~~~~~~~~~~vaiK~~~~~~---~~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~~~~lv~e~~~~-~l~ 140 (420)
T 1j1b_A 65 GSFGVVYQAKLCDSGELVAIKKVLQDK---RFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVY 140 (420)
T ss_dssp CSSEEEEEEEETTTCCEEEEEEEECCT---TSCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTEEEEEEEEECCCE-EHH
T ss_pred CCCEEEEEEEECCCCcEEEEEEecccc---hhHHHHHHHHHHcCCCCccceeeEEeccCCCCcceeEEeehhcccc-cHH
Confidence 89999999998 46778888775443 2345799999999999999999998642 1 25799999986 676
Q ss_pred hHhcc--CCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCC-CCeEEccccccccCCCC---CccccC
Q 014478 74 KHLFH--WETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKD-GNPRLSSFGLMKNSRDG---KSYSTN 147 (424)
Q Consensus 74 ~~l~~--~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~-~~~kl~Dfg~~~~~~~~---~~~~gt 147 (424)
+.+.. .....+++..+..++.||+.||.|||+++ |+||||||+|||++.+ +.+||+|||+++..... ....||
T Consensus 141 ~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~-ivHrDlkp~NILl~~~~~~~kl~DFG~a~~~~~~~~~~~~~~t 219 (420)
T 1j1b_A 141 RVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG-ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICS 219 (420)
T ss_dssp HHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTTT-EECSCCSGGGEEEETTTTEEEECCCTTCEECCTTCCCCSCCSC
T ss_pred HHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCC-ccccCCChhhEEEeCCCCeEEeccchhhhhcccCCCceeeeeC
Confidence 66532 13567999999999999999999999999 9999999999999865 56899999999865433 345789
Q ss_pred ccCCCccccccC-CCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhH----------hhhccc-CC--------
Q 014478 148 LAFTPPEYMRTG-RVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLL----------LMDSAL-EG-------- 207 (424)
Q Consensus 148 ~~y~aPE~~~~~-~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~----------~~~~~~-~~-------- 207 (424)
+.|+|||++.+. .++.++|||||||++|||++|+.||+.......-...... ...+.. ..
T Consensus 220 ~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~~l~~i~~~lg~p~~~~~~~~~~~~~~~~~p~~~~~ 299 (420)
T 1j1b_A 220 RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAH 299 (420)
T ss_dssp TTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHHHHCSCCCCCCCCCCCCC
T ss_pred CCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhChhhhhhccCccCCC
Confidence 999999999765 6899999999999999999999998764221111000000 000000 00
Q ss_pred ----CCCchhHHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 014478 208 ----HFSNDEGTELVRLASRCLQSEARERPNAKSLVIS 241 (424)
Q Consensus 208 ----~~~~~~~~~l~~li~~cl~~dp~~Rps~~~~~~~ 241 (424)
.++...++++.+||.+||..||.+|||+.++++|
T Consensus 300 ~~~~~~~~~~~~~~~~Li~~~L~~dP~~R~t~~e~l~h 337 (420)
T 1j1b_A 300 PWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAH 337 (420)
T ss_dssp CHHHHSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred CHHHhcCCCCCHHHHHHHHHhccCChhHCCCHHHHhCC
Confidence 0223457899999999999999999999999875
|
| >2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.2e-40 Score=310.91 Aligned_cols=235 Identities=17% Similarity=0.170 Sum_probs=186.6
Q ss_pred CCCcccceeeee--cceecccccCCCc--hhhhHHHHHHHHHhcCCCcCcceeEEEEEeC-----CeeeEEEecCCCCCH
Q 014478 2 GGRCSKFSICWF--HCHLKSSVLESSD--LGETLNLEEAKAVGNLRSERLANLIGCCYEA-----DERLLVAEFMPNETL 72 (424)
Q Consensus 2 G~~g~v~~~~~~--~~~v~~~~~~~~~--~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~-----~~~~lv~e~~~~gsL 72 (424)
|++|.||.+.+. +..|++|++.... .....+.+|+++++.++||||+++++++... ...++||||+. |+|
T Consensus 22 G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~lv~e~~~-~~L 100 (353)
T 2b9h_A 22 GAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQ-TDL 100 (353)
T ss_dssp CSSEEEEEEEETTTTEEEEEEEECCCSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCCCEEEEECCCS-EEH
T ss_pred CCCeEEEEEEECCCCcEEEEEeecccccchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccceEEEEEeccC-ccH
Confidence 899999999884 6778888875433 3456788999999999999999999998764 56899999997 599
Q ss_pred HhHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCC-----------
Q 014478 73 AKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG----------- 141 (424)
Q Consensus 73 ~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~----------- 141 (424)
.+++.. ..+++..+..++.|++.||.|||+++ ++||||||+|||++.++.+||+|||+++.....
T Consensus 101 ~~~~~~---~~~~~~~~~~~~~qi~~~L~~LH~~~-ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~ 176 (353)
T 2b9h_A 101 HRVIST---QMLSDDHIQYFIYQTLRAVKVLHGSN-VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQ 176 (353)
T ss_dssp HHHHHH---CCCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCCGGGEEECTTCCEEECCCTTCEECC-------------
T ss_pred HHHHhh---cCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCCHHHeEEcCCCcEEEEecccccccccccccccCccccc
Confidence 999854 57999999999999999999999999 999999999999999999999999999865421
Q ss_pred ---CccccCccCCCcccccc-CCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhh--------------------
Q 014478 142 ---KSYSTNLAFTPPEYMRT-GRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNF-------------------- 197 (424)
Q Consensus 142 ---~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~-------------------- 197 (424)
....||+.|+|||++.+ ..++.++|||||||++|+|++|..||.............
T Consensus 177 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (353)
T 2b9h_A 177 SGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHSDNDLRCIESPRA 256 (353)
T ss_dssp ---CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCSTTTTTTCCCHHH
T ss_pred cchhhccccccccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCchhccccccccchh
Confidence 12367999999998765 568999999999999999999998887643211100000
Q ss_pred hHhhhcccCC------CCCchhHHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 014478 198 LLLMDSALEG------HFSNDEGTELVRLASRCLQSEARERPNAKSLVIS 241 (424)
Q Consensus 198 ~~~~~~~~~~------~~~~~~~~~l~~li~~cl~~dp~~Rps~~~~~~~ 241 (424)
.......... .....+++++.++|.+||+.||++|||+.+++++
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 306 (353)
T 2b9h_A 257 REYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEH 306 (353)
T ss_dssp HHHHHTSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred hHHhhcccCCCCcchhhhcccCCHHHHHHHHHhcCcCcccCCCHHHHhcC
Confidence 0000000000 0113467889999999999999999999999864
|
| >3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.6e-40 Score=312.10 Aligned_cols=234 Identities=15% Similarity=0.179 Sum_probs=184.9
Q ss_pred CCCcccceeee--ecceecccccCCCc---hhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCe------eeEEEecCCCC
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESSD---LGETLNLEEAKAVGNLRSERLANLIGCCYEADE------RLLVAEFMPNE 70 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~~---~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~------~~lv~e~~~~g 70 (424)
|++|.||.+.+ .+..|++|++.... ...+.+.+|+.+++.++||||+++++++..... .++||||+. +
T Consensus 35 G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~lv~e~~~-~ 113 (353)
T 3coi_A 35 GAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYDFYLVMPFMQ-T 113 (353)
T ss_dssp CSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCCCCEEEEECCS-E
T ss_pred CCCeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCcccHhheEecccccccceeEEEEecccc-C
Confidence 89999999987 56778888875432 335678899999999999999999999987654 499999997 5
Q ss_pred CHHhHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCC-CccccCcc
Q 014478 71 TLAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG-KSYSTNLA 149 (424)
Q Consensus 71 sL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~-~~~~gt~~ 149 (424)
+|.+++. ..+++.++..++.||+.||.|||+++ ++||||||+||+++.++.+||+|||+++..... ....+|+.
T Consensus 114 ~l~~~~~----~~~~~~~~~~i~~qi~~al~~LH~~~-ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~t~~ 188 (353)
T 3coi_A 114 DLQKIMG----LKFSEEKIQYLVYQMLKGLKYIHSAG-VVHRDLKPGNLAVNEDCELKILDFGLARHADAEMTGYVVTRW 188 (353)
T ss_dssp EGGGTTT----SCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSSCCGGGEEECTTCCEEECSTTCTTC--------CCSBC
T ss_pred CHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCCHHHEeECCCCcEEEeecccccCCCCCccccccCcC
Confidence 9988873 45999999999999999999999999 999999999999999999999999999865533 34578999
Q ss_pred CCCcccccc-CCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhh----------------------hHhhhcccC
Q 014478 150 FTPPEYMRT-GRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNF----------------------LLLMDSALE 206 (424)
Q Consensus 150 y~aPE~~~~-~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~----------------------~~~~~~~~~ 206 (424)
|+|||++.+ ..++.++|||||||++|+|++|..||........-.... .........
T Consensus 189 y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (353)
T 3coi_A 189 YRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKAAKSYIQSLPQTPR 268 (353)
T ss_dssp CSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBSSCHHHHHHHHHHHHCBCCHHHHTTCSCHHHHHHHHTSCBCSS
T ss_pred cCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHHhhHHHHHHHHhCcCCCC
Confidence 999999886 578999999999999999999998887542211100000 000000001
Q ss_pred ---CCCCchhHHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 014478 207 ---GHFSNDEGTELVRLASRCLQSEARERPNAKSLVIS 241 (424)
Q Consensus 207 ---~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~~~~~ 241 (424)
......+++++.++|.+||..||++|||+++++++
T Consensus 269 ~~~~~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~h 306 (353)
T 3coi_A 269 KDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTH 306 (353)
T ss_dssp CCTTTTCTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred ccHHHhcCCcCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence 11234568899999999999999999999999865
|
| >1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B | Back alignment and structure |
|---|
Probab=100.00 E-value=4.9e-40 Score=308.94 Aligned_cols=238 Identities=16% Similarity=0.153 Sum_probs=188.2
Q ss_pred CCCcccceeeee---cceecccccCCCc---hhhhHHHHHHHHHhcC---CCcCcceeEEEEE-----eCCeeeEEEecC
Q 014478 2 GGRCSKFSICWF---HCHLKSSVLESSD---LGETLNLEEAKAVGNL---RSERLANLIGCCY-----EADERLLVAEFM 67 (424)
Q Consensus 2 G~~g~v~~~~~~---~~~v~~~~~~~~~---~~~~~~~~E~~~l~~l---~h~~iv~~~~~~~-----~~~~~~lv~e~~ 67 (424)
|++|.||.+.+. +..|++|++.... .....+.+|+.+++.+ +||||+++++++. .....++||||+
T Consensus 22 G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~~~~lv~e~~ 101 (326)
T 1blx_A 22 GAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHV 101 (326)
T ss_dssp ETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEECSSEEEEEEEEECC
T ss_pred cccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeecccCCCceEEEEEecC
Confidence 899999999873 4567777764322 2234677888888777 8999999999997 445688999999
Q ss_pred CCCCHHhHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCC---Ccc
Q 014478 68 PNETLAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG---KSY 144 (424)
Q Consensus 68 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~---~~~ 144 (424)
+ |+|.+++.......+++.+++.++.|++.||.|||+++ ++||||||+||+++.++.+||+|||+++..... ...
T Consensus 102 ~-~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~g-i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~ 179 (326)
T 1blx_A 102 D-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHR-VVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSV 179 (326)
T ss_dssp S-CBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEECTTCCEEECSCCSCCCCCGGGGGCCC
T ss_pred C-CCHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHCC-ceeccCCHHHeEEcCCCCEEEecCcccccccCCCCcccc
Confidence 8 59999997655566999999999999999999999999 999999999999999999999999998865532 345
Q ss_pred ccCccCCCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhh---------------------c
Q 014478 145 STNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMD---------------------S 203 (424)
Q Consensus 145 ~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~---------------------~ 203 (424)
.||..|+|||++.+..++.++|||||||++|+|++|+.||.................. .
T Consensus 180 ~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (326)
T 1blx_A 180 VVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPRQAFHSKSA 259 (326)
T ss_dssp CCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCGGGSCTTCSSCGGGSCCCCC
T ss_pred ccccceeCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCcccCccccccchhhhcccCc
Confidence 6899999999999888999999999999999999999888764222111111100000 0
Q ss_pred ccCCCCCchhHHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 014478 204 ALEGHFSNDEGTELVRLASRCLQSEARERPNAKSLVIS 241 (424)
Q Consensus 204 ~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~~~~~ 241 (424)
.........++..+.+||.+||..||++|||+.+++++
T Consensus 260 ~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 297 (326)
T 1blx_A 260 QPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSH 297 (326)
T ss_dssp CCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred chhhhccccCCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence 00011234567899999999999999999999999864
|
| >2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.6e-40 Score=310.78 Aligned_cols=237 Identities=14% Similarity=0.131 Sum_probs=191.9
Q ss_pred CCCcccceeeee--c-ceecccccCCCchhhhHHHHHHHHHhcCCCcC------cceeEEEEEeCCeeeEEEecCCCCCH
Q 014478 2 GGRCSKFSICWF--H-CHLKSSVLESSDLGETLNLEEAKAVGNLRSER------LANLIGCCYEADERLLVAEFMPNETL 72 (424)
Q Consensus 2 G~~g~v~~~~~~--~-~~v~~~~~~~~~~~~~~~~~E~~~l~~l~h~~------iv~~~~~~~~~~~~~lv~e~~~~gsL 72 (424)
|++|.||.+.+. + ..|++|++.......+.+.+|+.+++.++|++ ++.+++++...+..++||||+ +++|
T Consensus 30 G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~-~~~l 108 (355)
T 2eu9_A 30 GTFGKVVECLDHARGKSQVALKIIRNVGKYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFHGHMCIAFELL-GKNT 108 (355)
T ss_dssp ETTEEEEEEEETTTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEETTEEEEEEECC-CCBH
T ss_pred cCCeEEEEEEecCCCceEEEEEEEcccccchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeeeeCCeEEEEEecc-CCCh
Confidence 899999999873 3 56888888777666788899999999998766 899999999999999999999 5677
Q ss_pred HhHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeee-------------------cCCCCeEEcccc
Q 014478 73 AKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILF-------------------DKDGNPRLSSFG 133 (424)
Q Consensus 73 ~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill-------------------~~~~~~kl~Dfg 133 (424)
.+++......++++.+++.++.||+.||.|||+++ |+||||||+|||+ +.++.+||+|||
T Consensus 109 ~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~~-ivH~Dlkp~NIll~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg 187 (355)
T 2eu9_A 109 FEFLKENNFQPYPLPHVRHMAYQLCHALRFLHENQ-LTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFG 187 (355)
T ss_dssp HHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHTTT-EECCCCCGGGEEESCCCEEEEECCC-CCCEEEESCCCEEECCCT
T ss_pred HHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCCHHHEEEecccccccccccccccccccCCCcEEEeecC
Confidence 77776544567999999999999999999999999 9999999999999 567899999999
Q ss_pred ccccCCCC-CccccCccCCCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhc---------
Q 014478 134 LMKNSRDG-KSYSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDS--------- 203 (424)
Q Consensus 134 ~~~~~~~~-~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~--------- 203 (424)
+++..... ....||+.|+|||++.+..++.++|||||||++|||++|..||........... .......
T Consensus 188 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~-~~~~~~~~p~~~~~~~ 266 (355)
T 2eu9_A 188 SATFDHEHHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENREHLVM-MEKILGPIPSHMIHRT 266 (355)
T ss_dssp TCEETTSCCCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHH-HHHHHCCCCHHHHHHC
T ss_pred ccccccccccCCcCCCcccCCeeeecCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHHHHH-HHHHcCCCcHHHhhhc
Confidence 99865543 456789999999999988999999999999999999999988876422111000 0000000
Q ss_pred ------------------------------ccCCCCCchhHHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 014478 204 ------------------------------ALEGHFSNDEGTELVRLASRCLQSEARERPNAKSLVIS 241 (424)
Q Consensus 204 ------------------------------~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~~~~~ 241 (424)
..........+.++.+||.+||+.||++|||+.+++++
T Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~h 334 (355)
T 2eu9_A 267 RKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFDLMRRMLEFDPAQRITLAEALLH 334 (355)
T ss_dssp SCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCHHHHTTS
T ss_pred cchhhhcccccccccccchhccccccCCcccccccccchhHHHHHHHHHHHhcCChhhCcCHHHHhcC
Confidence 00011223456789999999999999999999999865
|
| >2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.9e-40 Score=303.40 Aligned_cols=232 Identities=15% Similarity=0.140 Sum_probs=189.7
Q ss_pred CCCcccceeee--ecceecccccCCC---chhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHhHh
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESS---DLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHL 76 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~---~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~l 76 (424)
|++|.||.+.+ .+..+++|++... ......+.+|++++++++||||+++++++......++||||+++++|.+++
T Consensus 33 G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l 112 (287)
T 2wei_A 33 GSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEI 112 (287)
T ss_dssp ETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHH
T ss_pred CCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhccCCCccEEEEEEeCCCeEEEEEEccCCCCHHHHH
Confidence 89999999987 4667787776433 234678899999999999999999999999999999999999999999988
Q ss_pred ccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCC---CCeEEccccccccCCCCC---ccccCccC
Q 014478 77 FHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKD---GNPRLSSFGLMKNSRDGK---SYSTNLAF 150 (424)
Q Consensus 77 ~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~---~~~kl~Dfg~~~~~~~~~---~~~gt~~y 150 (424)
.. ...+++.+++.++.|++.||.|||+++ ++||||||+||+++.+ +.+||+|||++....... ...+|+.|
T Consensus 113 ~~--~~~~~~~~~~~i~~qi~~~l~~LH~~~-i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~y 189 (287)
T 2wei_A 113 IK--RKRFSEHDAARIIKQVFSGITYMHKHN-IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYY 189 (287)
T ss_dssp HH--HSSCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEESCSSTTCCEEECSTTGGGTBCCCSSCSCHHHHHTT
T ss_pred Hh--cCCCCHHHHHHHHHHHHHHHHHHHHCC-eeccCCChhhEEEecCCCcccEEEeccCcceeecCCCccccccCcccc
Confidence 64 457999999999999999999999999 9999999999999654 469999999988655432 33578999
Q ss_pred CCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhcccCCCCC--chhHHHHHHHHHHhcccC
Q 014478 151 TPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFS--NDEGTELVRLASRCLQSE 228 (424)
Q Consensus 151 ~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~~li~~cl~~d 228 (424)
+|||.+.+ .++.++||||||+++|+|++|..||......... ..+.........+ ..+++++.++|.+||..|
T Consensus 190 ~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~d 264 (287)
T 2wei_A 190 IAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEYDIL----KRVETGKYAFDLPQWRTISDDAKDLIRKMLTFH 264 (287)
T ss_dssp CCHHHHTT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHH----HHHHHCCCCCCSGGGTTSCHHHHHHHHHHTCSS
T ss_pred cChHHhcC-CCCCchhhHhHHHHHHHHHhCCCCCCCCCHHHHH----HHHHcCCCCCCchhhhhcCHHHHHHHHHHcccC
Confidence 99999874 5899999999999999999999888764222111 1111111111111 346789999999999999
Q ss_pred cCCCCCHHHHHHH
Q 014478 229 ARERPNAKSLVIS 241 (424)
Q Consensus 229 p~~Rps~~~~~~~ 241 (424)
|++|||+.+++++
T Consensus 265 p~~Rps~~ell~h 277 (287)
T 2wei_A 265 PSLRITATQCLEH 277 (287)
T ss_dssp GGGSCCHHHHHHS
T ss_pred hhhCcCHHHHhcC
Confidence 9999999999975
|
| >3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.2e-40 Score=318.77 Aligned_cols=237 Identities=12% Similarity=0.181 Sum_probs=173.6
Q ss_pred CCCcccceeeee----cceecccccCCCchhhhHHHHHHHHHhcCCCcCcceeEEEEEe--CCeeeEEEecCCCCCHHhH
Q 014478 2 GGRCSKFSICWF----HCHLKSSVLESSDLGETLNLEEAKAVGNLRSERLANLIGCCYE--ADERLLVAEFMPNETLAKH 75 (424)
Q Consensus 2 G~~g~v~~~~~~----~~~v~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~--~~~~~lv~e~~~~gsL~~~ 75 (424)
|+||.||.+.+. +..+++|++..... ...+.+|+.+|+.++||||+++++++.. +...++||||+.+ +|.++
T Consensus 32 G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~~-~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~lv~e~~~~-~l~~~ 109 (405)
T 3rgf_A 32 GTYGHVYKAKRKDGKDDKDYALKQIEGTGI-SMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAEH-DLWHI 109 (405)
T ss_dssp ----EEEEEEESSSSCCCCEEEEECSSSSC-CHHHHHHHHHHHHCCCTTBCCCCEEEEETTTTEEEEEEECCSE-EHHHH
T ss_pred cCCeEEEEEEEccCCCCeEEEEEEECCCCC-CHHHHHHHHHHHhcCCCCeeeEeeEEecCCCCeEEEEEeCCCC-CHHHH
Confidence 899999999864 56688888765443 3568899999999999999999999965 6678999999975 88887
Q ss_pred hccC-------CCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeee----cCCCCeEEccccccccCCCC---
Q 014478 76 LFHW-------ETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILF----DKDGNPRLSSFGLMKNSRDG--- 141 (424)
Q Consensus 76 l~~~-------~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill----~~~~~~kl~Dfg~~~~~~~~--- 141 (424)
+... ....+++..++.++.||+.||.|||+++ |+||||||+|||+ +.++.+||+|||+++.....
T Consensus 110 ~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~-ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a~~~~~~~~~ 188 (405)
T 3rgf_A 110 IKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANW-VLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKP 188 (405)
T ss_dssp HHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEECCSSTTTTCEEECCTTCCC--------
T ss_pred HHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHhCC-EeCCCcCHHHeEEecCCCCCCcEEEEECCCceecCCCCcc
Confidence 7421 1235999999999999999999999999 9999999999999 67789999999999865432
Q ss_pred ----CccccCccCCCccccccC-CCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhh-----hh---hhHhhhcc----
Q 014478 142 ----KSYSTNLAFTPPEYMRTG-RVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRS-----KN---FLLLMDSA---- 204 (424)
Q Consensus 142 ----~~~~gt~~y~aPE~~~~~-~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~-----~~---~~~~~~~~---- 204 (424)
....||+.|+|||++.+. .++.++|||||||++|+|++|..||.......... .. +...+...
T Consensus 189 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~l~~i~~~~g~p~~~~ 268 (405)
T 3rgf_A 189 LADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFNVMGFPADKD 268 (405)
T ss_dssp --------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHHHHSSCTTCCCC------CCCCHHHHHHHHHHHCCCCTTT
T ss_pred cccCCCceecCcccCchhhcCCCcccchhhhHHHHHHHHHHHhCCCCCCCccccccccccchHHHHHHHHHhhCCCChhh
Confidence 235689999999999874 48999999999999999999998886432110000 00 00000000
Q ss_pred ---------------------cCC--------CCCchhHHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 014478 205 ---------------------LEG--------HFSNDEGTELVRLASRCLQSEARERPNAKSLVIS 241 (424)
Q Consensus 205 ---------------------~~~--------~~~~~~~~~l~~li~~cl~~dp~~Rps~~~~~~~ 241 (424)
... ......++++.+||.+||..||.+|||+++++++
T Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~L~~dP~~R~ta~e~L~h 334 (405)
T 3rgf_A 269 WEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQD 334 (405)
T ss_dssp CGGGGGSTTHHHHHHHCCGGGGTTCCHHHHHHTTTCCTTSHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred cchhhcCcchhhhhhhccccCCCcchhhhhHhhcCCCCCHHHHHHHHHHccCCcccCCCHHHHhcC
Confidence 000 0001125678999999999999999999999976
|
| >3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-40 Score=312.60 Aligned_cols=239 Identities=16% Similarity=0.206 Sum_probs=170.9
Q ss_pred CCCcccceeeee--cceecccccCCCc--hhhhHHHHHHH-HHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHhHh
Q 014478 2 GGRCSKFSICWF--HCHLKSSVLESSD--LGETLNLEEAK-AVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHL 76 (424)
Q Consensus 2 G~~g~v~~~~~~--~~~v~~~~~~~~~--~~~~~~~~E~~-~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~l 76 (424)
|+||.||.+.+. +..|++|++.... .....+..|+. +++.++||||+++++++...+..++||||+++ +|.+++
T Consensus 33 G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~~~~~lv~e~~~~-~l~~~~ 111 (327)
T 3aln_A 33 GAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWICMELMST-SFDKFY 111 (327)
T ss_dssp CSSEEEEEEEETTTTEEEEEEEEECCCCHHHHHHHHHHHHHHHSSCCCTTBCCEEEEEECSSEEEEEECCCSE-EHHHHH
T ss_pred CCCEEEEEEEEcCCCCEEEEEEeecccCchHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeCCceEEEEeecCC-ChHHHH
Confidence 899999999984 7778888775432 33445666666 77778999999999999999999999999986 888776
Q ss_pred cc---CCCCCCCHHHHHHHHHHHHHHHHHHHhC-CCcccccCCCCCeeecCCCCeEEccccccccCCCC---CccccCcc
Q 014478 77 FH---WETQPMKWAMRLRVALYLAQALEYCSSK-GRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG---KSYSTNLA 149 (424)
Q Consensus 77 ~~---~~~~~l~~~~~~~i~~qi~~~L~~lH~~-~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~---~~~~gt~~ 149 (424)
.. .....+++..+..++.|++.||.|||++ + ++||||||+|||++.++.+||+|||+++..... ....||+.
T Consensus 112 ~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~-ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~gt~~ 190 (327)
T 3aln_A 112 KYVYSVLDDVIPEEILGKITLATVKALNHLKENLK-IIHRDIKPSNILLDRSGNIKLCDFGISGQLVDSIAKTRDAGCRP 190 (327)
T ss_dssp HHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHHHS-CCCSCCCGGGEEEETTTEEEECCCSSSCC---------------
T ss_pred HHHHhhhcccCcHHHHHHHHHHHHHHHHHHhccCC-EeECCCCHHHEEEcCCCCEEEccCCCceecccccccccCCCCcc
Confidence 42 2256799999999999999999999998 9 999999999999999999999999999865533 23368999
Q ss_pred CCCcccc----ccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHHHHHHHHHhc
Q 014478 150 FTPPEYM----RTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCL 225 (424)
Q Consensus 150 y~aPE~~----~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl 225 (424)
|+|||++ .+..++.++|||||||++|+|++|..||............................+++++.+++.+||
T Consensus 191 y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l 270 (327)
T 3aln_A 191 YMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFDQLTQVVKGDPPQLSNSEEREFSPSFINFVNLCL 270 (327)
T ss_dssp ---------------CCSHHHHHHHHHHHHHHHHSCCCSSCC-------CCCCCSCCCCCCCCSSCCCCHHHHHHHHHHT
T ss_pred ccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCCCcchHHHHHHHHhcCCCCCCCCcccccCCHHHHHHHHHHh
Confidence 9999998 455689999999999999999999988875311100000000000111111222356889999999999
Q ss_pred ccCcCCCCCHHHHHHHH
Q 014478 226 QSEARERPNAKSLVISL 242 (424)
Q Consensus 226 ~~dp~~Rps~~~~~~~l 242 (424)
..||++|||+.+++++-
T Consensus 271 ~~dp~~Rps~~ell~hp 287 (327)
T 3aln_A 271 TKDESKRPKYKELLKHP 287 (327)
T ss_dssp CSSGGGSCCHHHHTTSH
T ss_pred hCChhhCcCHHHHHhCh
Confidence 99999999999999863
|
| >2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-39 Score=313.39 Aligned_cols=184 Identities=14% Similarity=0.130 Sum_probs=161.3
Q ss_pred CCCcccceeee--ecceecccccCCCchhhhHHHHHHHHHhcCC-Cc-----CcceeEEEEEeCCeeeEEEecCCCCCHH
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESSDLGETLNLEEAKAVGNLR-SE-----RLANLIGCCYEADERLLVAEFMPNETLA 73 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~~~~~~~~~~E~~~l~~l~-h~-----~iv~~~~~~~~~~~~~lv~e~~~~gsL~ 73 (424)
|+||.||.+.+ .+..|++|++.........+..|+++++.++ |+ +|+++++++...+..++||||+++ +|.
T Consensus 65 G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~lv~e~~~~-~L~ 143 (382)
T 2vx3_A 65 GSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFRNHLCLVFEMLSY-NLY 143 (382)
T ss_dssp ETTEEEEEEEETTTTEEEEEEEECSSHHHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEETTEEEEEEECCCC-BHH
T ss_pred cCCEEEEEEEEcCCCcEEEEEEEeccHHHHHHHHHHHHHHHHHHhcccccceeEEEeeeeeccCCceEEEEecCCC-CHH
Confidence 89999999987 4667899998877666777888999998884 55 499999999999999999999965 999
Q ss_pred hHhccCCCCCCCHHHHHHHHHHHHHHHHHHHh--CCCcccccCCCCCeeec--CCCCeEEccccccccCCCC-CccccCc
Q 014478 74 KHLFHWETQPMKWAMRLRVALYLAQALEYCSS--KGRALYHDLNAYRILFD--KDGNPRLSSFGLMKNSRDG-KSYSTNL 148 (424)
Q Consensus 74 ~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~--~~~ivH~dikp~Nill~--~~~~~kl~Dfg~~~~~~~~-~~~~gt~ 148 (424)
+++.......+++..+..++.|++.||.|||. .+ |+||||||+|||++ .++.+||+|||+++..... ....||+
T Consensus 144 ~~l~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~~~-ivHrDlkp~NIll~~~~~~~~kL~DFG~a~~~~~~~~~~~~t~ 222 (382)
T 2vx3_A 144 DLLRNTNFRGVSLNLTRKFAQQMCTALLFLATPELS-IIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQYIQSR 222 (382)
T ss_dssp HHHHHTTTSCCCHHHHHHHHHHHHHHHHHHTSTTTC-EECCCCSGGGEEESSTTSCCEEECCCTTCEETTCCCCSSCSCG
T ss_pred HHHhhcCcCCCCHHHHHHHHHHHHHHHHHhccCCCC-EEcCCCCcccEEEecCCCCcEEEEeccCceecccccccccCCc
Confidence 99976555679999999999999999999994 67 99999999999994 4778999999999876543 4567899
Q ss_pred cCCCccccccCCCCCCcceehhHHHHHHHhhCCCCCCch
Q 014478 149 AFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSH 187 (424)
Q Consensus 149 ~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~ 187 (424)
.|+|||++.+..++.++|||||||++|||++|+.||...
T Consensus 223 ~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~ 261 (382)
T 2vx3_A 223 FYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGA 261 (382)
T ss_dssp GGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred cccChHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 999999999889999999999999999999999888764
|
| >4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-40 Score=319.66 Aligned_cols=236 Identities=18% Similarity=0.208 Sum_probs=179.7
Q ss_pred CCCcccceeee-ecceecccccCCCchhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCe------eeEEEecCCCCCHHh
Q 014478 2 GGRCSKFSICW-FHCHLKSSVLESSDLGETLNLEEAKAVGNLRSERLANLIGCCYEADE------RLLVAEFMPNETLAK 74 (424)
Q Consensus 2 G~~g~v~~~~~-~~~~v~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~------~~lv~e~~~~gsL~~ 74 (424)
|+||.||.+.+ .+..+++|++.... ....+|+++++.++||||+++++++..... .++||||++++.+..
T Consensus 51 G~~g~V~~a~~~~~~~~aikk~~~~~---~~~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~ 127 (394)
T 4e7w_A 51 GSFGVVFQAKLVESDEVAIKKVLQDK---RFKNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLNLVLEYVPETVYRA 127 (394)
T ss_dssp ETTEEEEEEEETTTEEEEEEEEECCT---TSCCHHHHHHHTCCCTTBCCEEEEEEEESSSSSCEEEEEEEECCSEEHHHH
T ss_pred CCCeEEEEEEECCCCeEEEEEEecCc---chHHHHHHHHHhCCCCCcceEEEEEEecCCCCCceEEEEEeeccCccHHHH
Confidence 89999999988 33446666664433 223479999999999999999999966443 789999998754333
Q ss_pred Hhc-cCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeec-CCCCeEEccccccccCCCC---CccccCcc
Q 014478 75 HLF-HWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFD-KDGNPRLSSFGLMKNSRDG---KSYSTNLA 149 (424)
Q Consensus 75 ~l~-~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~-~~~~~kl~Dfg~~~~~~~~---~~~~gt~~ 149 (424)
... ......+++..+..++.||+.||.|||+++ |+||||||+|||++ .++.+||+|||+++..... ....+|+.
T Consensus 128 ~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~-ivHrDlkp~Nill~~~~~~~kL~DFG~a~~~~~~~~~~~~~~t~~ 206 (394)
T 4e7w_A 128 SRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSIG-ICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGEPNVSYICSRY 206 (394)
T ss_dssp HHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEEETTTTEEEECCCTTCEECCTTCCCCSSCSCGG
T ss_pred HHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCC-ccCCCCCHHHEEEcCCCCcEEEeeCCCcccccCCCCCcccccCcC
Confidence 221 112567999999999999999999999999 99999999999998 7899999999999865433 34578999
Q ss_pred CCCccccccC-CCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhH----------hhhc-----ccC-------
Q 014478 150 FTPPEYMRTG-RVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLL----------LMDS-----ALE------- 206 (424)
Q Consensus 150 y~aPE~~~~~-~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~----------~~~~-----~~~------- 206 (424)
|+|||++.+. .++.++|||||||++|||++|+.||+.......-...... ...+ ...
T Consensus 207 y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (394)
T 4e7w_A 207 YRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQLVEIIKVLGTPSREQIKTMNPNYMEHKFPQIRPHPF 286 (394)
T ss_dssp GCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCGGGSSSCCCCCCCCCH
T ss_pred ccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhChhhhhhccccccCCcH
Confidence 9999999765 5899999999999999999999998865321111100000 0000 000
Q ss_pred -CCCCchhHHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 014478 207 -GHFSNDEGTELVRLASRCLQSEARERPNAKSLVIS 241 (424)
Q Consensus 207 -~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~~~~~ 241 (424)
..++..+++++.+||.+||+.||.+|||+.+++.|
T Consensus 287 ~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 322 (394)
T 4e7w_A 287 SKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALCH 322 (394)
T ss_dssp HHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred HHhccccCCHHHHHHHHHHhCCChhhCCCHHHHhcC
Confidence 01223467899999999999999999999999865
|
| >3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-40 Score=317.26 Aligned_cols=237 Identities=13% Similarity=0.121 Sum_probs=179.6
Q ss_pred CCCcccceeee-ecceecccccCCCc------------hhhhHHHHHHHHHhcCCCcCcceeEEEEEeC-----CeeeEE
Q 014478 2 GGRCSKFSICW-FHCHLKSSVLESSD------------LGETLNLEEAKAVGNLRSERLANLIGCCYEA-----DERLLV 63 (424)
Q Consensus 2 G~~g~v~~~~~-~~~~v~~~~~~~~~------------~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~-----~~~~lv 63 (424)
|++|.||.+.. .+..+++|++.... ...+.+.+|++++++++||||+++++++... ...++|
T Consensus 33 G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~lv 112 (362)
T 3pg1_A 33 GSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLV 112 (362)
T ss_dssp ETTEEEEEEECTTSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEEEECCTTTCCEEEEE
T ss_pred CCCEEEEEEECCCCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCccceeeeEEeccCCCcceEEEE
Confidence 89999999976 56677887764321 1236789999999999999999999999653 357999
Q ss_pred EecCCCCCHHhHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCC--
Q 014478 64 AEFMPNETLAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG-- 141 (424)
Q Consensus 64 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~-- 141 (424)
|||++ |+|.+++.. ....+++..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++.....
T Consensus 113 ~e~~~-~~l~~~~~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~~-ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~ 189 (362)
T 3pg1_A 113 TELMR-TDLAQVIHD-QRIVISPQHIQYFMYHILLGLHVLHEAG-VVHRDLHPGNILLADNNDITICDFNLAREDTADAN 189 (362)
T ss_dssp EECCS-EEHHHHHHC-TTSCCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEECTTCCEEECCTTC---------
T ss_pred EccCC-CCHHHHHHh-cccCCCHHHHHHHHHHHHHHHHHHHHCc-CEecCCChHHEEEcCCCCEEEEecCcccccccccc
Confidence 99998 588888864 3557999999999999999999999999 999999999999999999999999999754432
Q ss_pred -CccccCccCCCcccccc-CCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhh-------------------Hh
Q 014478 142 -KSYSTNLAFTPPEYMRT-GRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFL-------------------LL 200 (424)
Q Consensus 142 -~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~-------------------~~ 200 (424)
....||+.|+|||++.+ ..++.++|||||||++|+|++|+.||.............. ..
T Consensus 190 ~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 269 (362)
T 3pg1_A 190 KTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIVEVVGTPKIEDVVMFSSPSARDY 269 (362)
T ss_dssp ------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHHHTSCHHHHHH
T ss_pred cceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCChHHhhhccchhhhHH
Confidence 34568899999999886 5689999999999999999999988876422211111100 00
Q ss_pred hhcccCC-------CCCchhHHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 014478 201 MDSALEG-------HFSNDEGTELVRLASRCLQSEARERPNAKSLVIS 241 (424)
Q Consensus 201 ~~~~~~~-------~~~~~~~~~l~~li~~cl~~dp~~Rps~~~~~~~ 241 (424)
....... ..+...++.+.+||.+||+.||++|||+.+++++
T Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 317 (362)
T 3pg1_A 270 LRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALRH 317 (362)
T ss_dssp TTTCCCCCCCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred HHhhcccCChhhHHhhCCCCCHHHHHHHHHHhcCChhhCCCHHHHHcC
Confidence 0000000 0112346789999999999999999999999865
|
| >3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.3e-40 Score=307.63 Aligned_cols=234 Identities=18% Similarity=0.247 Sum_probs=187.8
Q ss_pred CCCcccceeee-ecceecccccCCC---chhhhHHHHHHHHHhcCC--CcCcceeEEEEEeCCeeeEEEecCCCCCHHhH
Q 014478 2 GGRCSKFSICW-FHCHLKSSVLESS---DLGETLNLEEAKAVGNLR--SERLANLIGCCYEADERLLVAEFMPNETLAKH 75 (424)
Q Consensus 2 G~~g~v~~~~~-~~~~v~~~~~~~~---~~~~~~~~~E~~~l~~l~--h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~ 75 (424)
|++|.||.+.+ .+..+++|++... ....+.+.+|++++.+++ ||||+++++++..++..++||| +.+++|.++
T Consensus 39 G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~e-~~~~~L~~~ 117 (313)
T 3cek_A 39 GGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME-CGNIDLNSW 117 (313)
T ss_dssp CSSEEEEEEECTTCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEEECSSEEEEEEC-CCSEEHHHH
T ss_pred CCCEEEEEEEcCCCcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEEEEeecCCEEEEEEe-cCCCcHHHH
Confidence 89999999987 4566777777433 334678899999999997 5999999999999999999999 568899999
Q ss_pred hccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCC------CccccCcc
Q 014478 76 LFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG------KSYSTNLA 149 (424)
Q Consensus 76 l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~------~~~~gt~~ 149 (424)
+.. ...+++.+++.++.|++.||.|||+++ ++||||||+|||++ ++.+||+|||+++..... ....||+.
T Consensus 118 l~~--~~~~~~~~~~~i~~qi~~aL~~LH~~~-ivH~dlkp~NIl~~-~~~~kL~Dfg~~~~~~~~~~~~~~~~~~gt~~ 193 (313)
T 3cek_A 118 LKK--KKSIDPWERKSYWKNMLEAVHTIHQHG-IVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTTSVVKDSQVGTVN 193 (313)
T ss_dssp HHH--CSSCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEEE-TTEEEECCCSSSCC--------------CCGG
T ss_pred HHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC-ceecCCCcccEEEE-CCeEEEeeccccccccCccccccccCCCCCCC
Confidence 975 457899999999999999999999999 99999999999996 488999999999865432 23468999
Q ss_pred CCCcccccc-----------CCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHHHH
Q 014478 150 FTPPEYMRT-----------GRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELV 218 (424)
Q Consensus 150 y~aPE~~~~-----------~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 218 (424)
|+|||.+.+ ..++.++|||||||++|+|++|..||....... ...............+...+.++.
T Consensus 194 y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~l~ 270 (313)
T 3cek_A 194 YMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQI---SKLHAIIDPNHEIEFPDIPEKDLQ 270 (313)
T ss_dssp GCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSSCTTTTCCSHH---HHHHHHHCTTSCCCCCCCSCHHHH
T ss_pred cCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCCCchhhHHHHH---HHHHHHHhcccccCCcccchHHHH
Confidence 999999875 467889999999999999999998876532111 112223333344445566678999
Q ss_pred HHHHHhcccCcCCCCCHHHHHHHHH
Q 014478 219 RLASRCLQSEARERPNAKSLVISLM 243 (424)
Q Consensus 219 ~li~~cl~~dp~~Rps~~~~~~~l~ 243 (424)
++|.+||..||.+|||+.+++++..
T Consensus 271 ~li~~~l~~dp~~Rps~~ell~h~~ 295 (313)
T 3cek_A 271 DVLKCCLKRDPKQRISIPELLAHPY 295 (313)
T ss_dssp HHHHHHTCSSTTTSCCHHHHHTSHH
T ss_pred HHHHHHccCCcccCcCHHHHhcCcc
Confidence 9999999999999999999997643
|
| >2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.8e-40 Score=307.42 Aligned_cols=235 Identities=17% Similarity=0.180 Sum_probs=181.1
Q ss_pred CCCcccceeeee--cceecccccCCCc-hhhhHHHHHHHHHhcCCCcCcceeEEEEE--------------eCCeeeEEE
Q 014478 2 GGRCSKFSICWF--HCHLKSSVLESSD-LGETLNLEEAKAVGNLRSERLANLIGCCY--------------EADERLLVA 64 (424)
Q Consensus 2 G~~g~v~~~~~~--~~~v~~~~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~~~~~~~--------------~~~~~~lv~ 64 (424)
|++|.||.+.+. +..+++|++.... ...+.+.+|++++++++||||+++++++. .....++||
T Consensus 22 G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~ 101 (320)
T 2i6l_A 22 GGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVGSLTELNSVYIVQ 101 (320)
T ss_dssp ----CEEEEEETTTTEEEEEEEEECCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC----CCSCSEEEEEE
T ss_pred CCCeEEEEEEECCCCeEEEEEEEecCChHHHHHHHHHHHHHHhcCCCCeeEEEEeccccccccccccccccccCceeEEe
Confidence 899999999984 6778888775443 44678899999999999999999999874 345689999
Q ss_pred ecCCCCCHHhHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeec-CCCCeEEccccccccCCCC--
Q 014478 65 EFMPNETLAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFD-KDGNPRLSSFGLMKNSRDG-- 141 (424)
Q Consensus 65 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~-~~~~~kl~Dfg~~~~~~~~-- 141 (424)
||++ |+|.+++. ..++++..++.++.|++.||.|||+++ ++||||||+||+++ .++.+||+|||+++.....
T Consensus 102 e~~~-~~L~~~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~~-i~H~dlkp~Nil~~~~~~~~kl~Dfg~~~~~~~~~~ 176 (320)
T 2i6l_A 102 EYME-TDLANVLE---QGPLLEEHARLFMYQLLRGLKYIHSAN-VLHRDLKPANLFINTEDLVLKIGDFGLARIMDPHYS 176 (320)
T ss_dssp ECCS-EEHHHHHT---TCCCCHHHHHHHHHHHHHHHHHHHHTT-CBCCCCSGGGEEEETTTTEEEECCCTTCBCC-----
T ss_pred eccC-CCHHHHhh---cCCccHHHHHHHHHHHHHHHHHHHhCC-EecCCCCHHHEEEcCCCCeEEEccCccccccCCCcc
Confidence 9997 59999994 467999999999999999999999999 99999999999997 5678999999999865422
Q ss_pred -----CccccCccCCCcccccc-CCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhH----------------
Q 014478 142 -----KSYSTNLAFTPPEYMRT-GRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLL---------------- 199 (424)
Q Consensus 142 -----~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~---------------- 199 (424)
....+|..|+|||.+.+ ..++.++|||||||++|+|++|+.||...............
T Consensus 177 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (320)
T 2i6l_A 177 HKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLILESIPVVHEEDRQELLSVI 256 (320)
T ss_dssp ---CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHSCCCCHHHHHHHHTTS
T ss_pred cccccccccccccccCcHHhcCcccCCchhhhHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCchhhhhhhhhcC
Confidence 23356889999998875 56899999999999999999999888764221111000000
Q ss_pred --hhhcccC-C-----CCCchhHHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 014478 200 --LMDSALE-G-----HFSNDEGTELVRLASRCLQSEARERPNAKSLVIS 241 (424)
Q Consensus 200 --~~~~~~~-~-----~~~~~~~~~l~~li~~cl~~dp~~Rps~~~~~~~ 241 (424)
....... . .....++.++.++|.+||+.||++|||+++++++
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 306 (320)
T 2i6l_A 257 PVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEALSH 306 (320)
T ss_dssp CHHHHHHTTSCCCCHHHHSTTCCHHHHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred cccccccccCCCCChhHhcchhhHHHHHHHHHHcCCCccccCCHHHHhCC
Confidence 0000000 0 0123467889999999999999999999999875
|
| >2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.6e-40 Score=319.78 Aligned_cols=234 Identities=16% Similarity=0.119 Sum_probs=177.1
Q ss_pred CCCcccce-eeeecceecccccCCCchhhhHHHHHHHHHhcC-CCcCcceeEEEEEeCCeeeEEEecCCCCCHHhHhccC
Q 014478 2 GGRCSKFS-ICWFHCHLKSSVLESSDLGETLNLEEAKAVGNL-RSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHW 79 (424)
Q Consensus 2 G~~g~v~~-~~~~~~~v~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~ 79 (424)
|+||.||. +.+.+..|++|++.... .+.+.+|+++|+++ +||||+++++++.+++..+|||||+. |+|.+++...
T Consensus 26 G~~g~V~~~~~~~g~~vAvK~~~~~~--~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~lv~E~~~-gsL~~~l~~~ 102 (434)
T 2rio_A 26 GSSGTVVFQGSFQGRPVAVKRMLIDF--CDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALELCN-LNLQDLVESK 102 (434)
T ss_dssp CSTTCEEEEEESSSSEEEEEEEEGGG--HHHHHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECCCS-EEHHHHHHTC
T ss_pred CCCeEEEEEEEECCeEEEEEEEcHHH--HHHHHHHHHHHHhccCCCCcCeEEEEEecCCeEEEEEecCC-CCHHHHHhcc
Confidence 89999964 44578889998875433 45678999999987 89999999999999999999999996 5999999653
Q ss_pred CCCC-----CCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCC-------------CCeEEccccccccCCCC
Q 014478 80 ETQP-----MKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKD-------------GNPRLSSFGLMKNSRDG 141 (424)
Q Consensus 80 ~~~~-----l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~-------------~~~kl~Dfg~~~~~~~~ 141 (424)
.... .++..++.++.||+.||.|||+++ |+||||||+|||++.+ +.+||+|||+++.....
T Consensus 103 ~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~-ivHrDLkp~NILl~~~~~~~~~~~~~~~~~~~kL~DFG~a~~~~~~ 181 (434)
T 2rio_A 103 NVSDENLKLQKEYNPISLLRQIASGVAHLHSLK-IIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSG 181 (434)
T ss_dssp ------------CCHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEEECCHHHHSCCTTCCCSCEEEECCCTTCEECCC-
T ss_pred CCCchhhhhccchhHHHHHHHHHHHHHHHHHCC-ccccCCChHhEEEecCcccccccccCCCceEEEEcccccceecCCC
Confidence 2111 123346789999999999999999 9999999999999654 47999999999876543
Q ss_pred C--------ccccCccCCCcccccc-------CCCCCCcceehhHHHHHHHhh-CCCCCCchhhHHHhhhhhhHhhh-cc
Q 014478 142 K--------SYSTNLAFTPPEYMRT-------GRVTPESVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKNFLLLMD-SA 204 (424)
Q Consensus 142 ~--------~~~gt~~y~aPE~~~~-------~~~~~~~Dv~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~-~~ 204 (424)
. ...||+.|+|||++.+ ..++.++|||||||++|||++ |..||........ ........ ..
T Consensus 182 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~~--~i~~~~~~~~~ 259 (434)
T 2rio_A 182 QSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRES--NIIRGIFSLDE 259 (434)
T ss_dssp -------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTCSTTTHHH--HHHHTCCCCCC
T ss_pred CccceeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCCCCCchhhHH--HHhcCCCCccc
Confidence 2 3468999999999975 568999999999999999999 8877765321111 00000000 11
Q ss_pred cCCCCCchhHHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 014478 205 LEGHFSNDEGTELVRLASRCLQSEARERPNAKSLVIS 241 (424)
Q Consensus 205 ~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~~~~~ 241 (424)
.....+..+++++.++|.+||+.||.+|||+.+++++
T Consensus 260 ~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~h 296 (434)
T 2rio_A 260 MKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLRH 296 (434)
T ss_dssp CTTCCCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred ccccccccchHHHHHHHHHHhhCChhhCCCHHHHHhC
Confidence 1112234678899999999999999999999999875
|
| >3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-39 Score=317.16 Aligned_cols=230 Identities=14% Similarity=0.124 Sum_probs=178.0
Q ss_pred CCCccc-ceeeeecceecccccCCCchhhhHHHHHHHHHhcC-CCcCcceeEEEEEeCCeeeEEEecCCCCCHHhHhccC
Q 014478 2 GGRCSK-FSICWFHCHLKSSVLESSDLGETLNLEEAKAVGNL-RSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHW 79 (424)
Q Consensus 2 G~~g~v-~~~~~~~~~v~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~ 79 (424)
|++|.| +.+.+.+..|++|++.... ...+.+|+++|+.+ +||||+++++++.+....+|||||+. |+|.+++...
T Consensus 35 G~~G~V~~~~~~~~~~vAvK~~~~~~--~~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~lv~E~~~-g~L~~~l~~~ 111 (432)
T 3p23_A 35 GAEGTIVYRGMFDNRDVAVKRILPEC--FSFADREVQLLRESDEHPNVIRYFCTEKDRQFQYIAIELCA-ATLQEYVEQK 111 (432)
T ss_dssp CGGGCEEEEEESSSSEEEEEEECTTT--EEECHHHHHHHHHSCCCTTBCCEEEEEEETTEEEEEEECCS-EEHHHHHHSS
T ss_pred CcCEEEEEEEEeCCeEEEEEEECHHH--HHHHHHHHHHHHhccCCCCcCeEEEEEecCCEEEEEEECCC-CCHHHHHHhc
Confidence 899984 5556688889999886543 23467899999999 89999999999999999999999996 5999999653
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecC---C--CCeEEccccccccCCCC-------CccccC
Q 014478 80 ETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDK---D--GNPRLSSFGLMKNSRDG-------KSYSTN 147 (424)
Q Consensus 80 ~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~---~--~~~kl~Dfg~~~~~~~~-------~~~~gt 147 (424)
...+++.+++.++.||+.||.|||+++ |+||||||+|||++. + ..+||+|||+++..... ....||
T Consensus 112 -~~~~~~~~~~~i~~qi~~aL~~LH~~~-ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~gt 189 (432)
T 3p23_A 112 -DFAHLGLEPITLLQQTTSGLAHLHSLN-IVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVPGT 189 (432)
T ss_dssp -SCCCCSSCHHHHHHHHHHHHHHHHHTT-CCCCCCSTTSEEECCCBTTTBCCEEECCTTEEECC------------CCSC
T ss_pred -CCCccchhHHHHHHHHHHHHHHHHHCc-CEeCCCCHHHEEEecCCCCCceeEEEecccceeeccCCCcceeeccccCCC
Confidence 344566677899999999999999999 999999999999943 2 35789999999876432 235689
Q ss_pred ccCCCcccccc---CCCCCCcceehhHHHHHHHhh-CCCCCCchhhHHHhhhhhhHhhhcc--cCCCCCchhHHHHHHHH
Q 014478 148 LAFTPPEYMRT---GRVTPESVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKNFLLLMDSA--LEGHFSNDEGTELVRLA 221 (424)
Q Consensus 148 ~~y~aPE~~~~---~~~~~~~Dv~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~li 221 (424)
+.|+|||++.+ ..++.++|||||||++|||++ |..||........ ....... .....+...+..+.+||
T Consensus 190 ~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~li 264 (432)
T 3p23_A 190 EGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQA-----NILLGACSLDCLHPEKHEDVIARELI 264 (432)
T ss_dssp TTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBSTTTHHH-----HHHTTCCCCTTSCTTCHHHHHHHHHH
T ss_pred cCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchhhHHHH-----HHHhccCCccccCccccccHHHHHHH
Confidence 99999999983 567889999999999999999 7766644311111 1111111 11112334577799999
Q ss_pred HHhcccCcCCCCCHHHHHHH
Q 014478 222 SRCLQSEARERPNAKSLVIS 241 (424)
Q Consensus 222 ~~cl~~dp~~Rps~~~~~~~ 241 (424)
.+||+.||.+|||+.+++++
T Consensus 265 ~~~L~~dP~~Rps~~evl~h 284 (432)
T 3p23_A 265 EKMIAMDPQKRPSAKHVLKH 284 (432)
T ss_dssp HHHSCSSGGGSCCHHHHHTS
T ss_pred HHHHhCCHhhCCCHHHHHhC
Confidence 99999999999999999965
|
| >3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-40 Score=309.40 Aligned_cols=225 Identities=20% Similarity=0.276 Sum_probs=189.1
Q ss_pred CCCcccceeee--ecceecccccCCCch-------hhhHHHHHHHHHhcCC--CcCcceeEEEEEeCCeeeEEEecCCC-
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESSDL-------GETLNLEEAKAVGNLR--SERLANLIGCCYEADERLLVAEFMPN- 69 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~~~-------~~~~~~~E~~~l~~l~--h~~iv~~~~~~~~~~~~~lv~e~~~~- 69 (424)
|+||.||.+.+ .+..|++|++..... ....+.+|+.++++++ ||||+++++++...+..++|||++.+
T Consensus 54 G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~ 133 (320)
T 3a99_A 54 GGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPV 133 (320)
T ss_dssp SSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEECSSEEEEEEECCSSE
T ss_pred CCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEEecCCcEEEEEEcCCCC
Confidence 89999999987 566788887754432 2356778999999996 59999999999999999999999976
Q ss_pred CCHHhHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeec-CCCCeEEccccccccCCCC--Ccccc
Q 014478 70 ETLAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFD-KDGNPRLSSFGLMKNSRDG--KSYST 146 (424)
Q Consensus 70 gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~-~~~~~kl~Dfg~~~~~~~~--~~~~g 146 (424)
++|.+++.. ...+++..++.++.||+.||.|||+++ |+||||||+|||++ .++.+||+|||+++..... ....|
T Consensus 134 ~~L~~~l~~--~~~l~~~~~~~i~~qi~~~L~~LH~~~-ivH~Dlkp~NIll~~~~~~~kL~Dfg~~~~~~~~~~~~~~g 210 (320)
T 3a99_A 134 QDLFDFITE--RGALQEELARSFFWQVLEAVRHCHNCG-VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDG 210 (320)
T ss_dssp EEHHHHHHH--HCSCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEEETTTTEEEECCCTTCEECCSSCBCCCCS
T ss_pred ccHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHHCC-cEeCCCCHHHEEEeCCCCCEEEeeCccccccccccccCCCC
Confidence 899999965 467999999999999999999999999 99999999999998 7889999999999876543 34568
Q ss_pred CccCCCccccccCCC-CCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHHHHHHHHHhc
Q 014478 147 NLAFTPPEYMRTGRV-TPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCL 225 (424)
Q Consensus 147 t~~y~aPE~~~~~~~-~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl 225 (424)
|+.|+|||++.+..+ +.++|||||||++|||++|..||..... . ... ....+..+++++.++|.+||
T Consensus 211 t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~--~--------~~~--~~~~~~~~~~~~~~li~~~l 278 (320)
T 3a99_A 211 TRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE--I--------IRG--QVFFRQRVSSECQHLIRWCL 278 (320)
T ss_dssp CGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHH--H--------HHC--CCCCSSCCCHHHHHHHHHHT
T ss_pred CccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCCCCCChhh--h--------hcc--cccccccCCHHHHHHHHHHc
Confidence 999999999987765 6789999999999999999988865311 0 111 11234556789999999999
Q ss_pred ccCcCCCCCHHHHHHH
Q 014478 226 QSEARERPNAKSLVIS 241 (424)
Q Consensus 226 ~~dp~~Rps~~~~~~~ 241 (424)
+.||++|||+++++++
T Consensus 279 ~~dp~~Rps~~~ll~h 294 (320)
T 3a99_A 279 ALRPSDRPTFEEIQNH 294 (320)
T ss_dssp CSSGGGSCCHHHHHTS
T ss_pred cCChhhCcCHHHHhcC
Confidence 9999999999999875
|
| >2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-39 Score=304.33 Aligned_cols=235 Identities=16% Similarity=0.227 Sum_probs=173.4
Q ss_pred CCCcccceeee--ecceecccccCCCch--h-hhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHhHh
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESSDL--G-ETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHL 76 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~~~--~-~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~l 76 (424)
|++|.||.+.+ .+..+++|++..... . .+.+.++..+++.++||||+++++++..++..++||||+ ++.+..+.
T Consensus 36 G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~-~~~~~~l~ 114 (318)
T 2dyl_A 36 GTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIAMELM-GTCAEKLK 114 (318)
T ss_dssp ----CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCC-SEEHHHHH
T ss_pred cCCeeEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEEecCCcEEEEEecc-CCcHHHHH
Confidence 89999999988 477888888754432 2 334445556788889999999999999999999999999 55666655
Q ss_pred ccCCCCCCCHHHHHHHHHHHHHHHHHHHhC-CCcccccCCCCCeeecCCCCeEEccccccccCCCC---CccccCccCCC
Q 014478 77 FHWETQPMKWAMRLRVALYLAQALEYCSSK-GRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG---KSYSTNLAFTP 152 (424)
Q Consensus 77 ~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~-~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~---~~~~gt~~y~a 152 (424)
.. ....+++..++.++.|++.||.|||++ + ++||||||+||+++.++.+||+|||++...... ....+|+.|+|
T Consensus 115 ~~-~~~~~~~~~~~~~~~~i~~~l~~lH~~~~-i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~y~a 192 (318)
T 2dyl_A 115 KR-MQGPIPERILGKMTVAIVKALYYLKEKHG-VIHRDVKPSNILLDERGQIKLCDFGISGRLVDDKAKDRSAGCAAYMA 192 (318)
T ss_dssp HH-HTSCCCHHHHHHHHHHHHHHHHHHHHHHC-CCCCCCCGGGEEECTTSCEEECCCTTC--------------CCTTCC
T ss_pred HH-hccCCCHHHHHHHHHHHHHHHHHHHhhCC-EEeCCCCHHHEEECCCCCEEEEECCCchhccCCccccccCCCccccC
Confidence 33 356799999999999999999999996 8 999999999999999999999999998765433 23468999999
Q ss_pred ccccc-----cCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhcc-cCCCCCchhHHHHHHHHHHhcc
Q 014478 153 PEYMR-----TGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSA-LEGHFSNDEGTELVRLASRCLQ 226 (424)
Q Consensus 153 PE~~~-----~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~li~~cl~ 226 (424)
||++. ...++.++|||||||++|+|++|..||....... .......... ........+++++.++|.+||.
T Consensus 193 PE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~ 269 (318)
T 2dyl_A 193 PERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDF---EVLTKVLQEEPPLLPGHMGFSGDFQSFVKDCLT 269 (318)
T ss_dssp HHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTTCCSHH---HHHHHHHHSCCCCCCSSSCCCHHHHHHHHHHTC
T ss_pred hhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCCCCccH---HHHHHHhccCCCCCCccCCCCHHHHHHHHHHcc
Confidence 99995 4568889999999999999999998876521111 1111111111 1111123467899999999999
Q ss_pred cCcCCCCCHHHHHHHH
Q 014478 227 SEARERPNAKSLVISL 242 (424)
Q Consensus 227 ~dp~~Rps~~~~~~~l 242 (424)
.||.+|||+.+++++-
T Consensus 270 ~dp~~Rps~~~ll~h~ 285 (318)
T 2dyl_A 270 KDHRKRPKYNKLLEHS 285 (318)
T ss_dssp SCTTTSCCHHHHTTSH
T ss_pred CChhHCcCHHHHhhCH
Confidence 9999999999999863
|
| >2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.6e-40 Score=305.13 Aligned_cols=225 Identities=19% Similarity=0.318 Sum_probs=184.4
Q ss_pred CCCcccceeee--ecceecccccCCCch-------hhhHHHHHHHHHhcC----CCcCcceeEEEEEeCCeeeEEEec-C
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESSDL-------GETLNLEEAKAVGNL----RSERLANLIGCCYEADERLLVAEF-M 67 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~~~-------~~~~~~~E~~~l~~l----~h~~iv~~~~~~~~~~~~~lv~e~-~ 67 (424)
|++|.||.+.+ .+..+++|++..... ....+.+|+.++.++ +||||+++++++...+..++|||+ +
T Consensus 42 G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~~~~~~~~~~~v~e~~~ 121 (312)
T 2iwi_A 42 GGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLDWFETQEGFMLVLERPL 121 (312)
T ss_dssp ETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEEEEC-----CEEEEECCS
T ss_pred CCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEEEEecCCeEEEEEEecC
Confidence 89999999987 566788888755432 234566799999998 899999999999998899999999 7
Q ss_pred CCCCHHhHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeec-CCCCeEEccccccccCCCC--Ccc
Q 014478 68 PNETLAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFD-KDGNPRLSSFGLMKNSRDG--KSY 144 (424)
Q Consensus 68 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~-~~~~~kl~Dfg~~~~~~~~--~~~ 144 (424)
.+++|.+++.. ...+++..++.++.||+.||.|||+++ ++||||||+||+++ .++.+||+|||+++..... ...
T Consensus 122 ~~~~L~~~l~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~-i~H~dlkp~Nil~~~~~~~~kl~dfg~~~~~~~~~~~~~ 198 (312)
T 2iwi_A 122 PAQDLFDYITE--KGPLGEGPSRCFFGQVVAAIQHCHSRG-VVHRDIKDENILIDLRRGCAKLIDFGSGALLHDEPYTDF 198 (312)
T ss_dssp SEEEHHHHHHH--HCSCCHHHHHHHHHHHHHHHHHHHHHT-EECCCCSGGGEEEETTTTEEEECCCSSCEECCSSCBCCC
T ss_pred CCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC-eeecCCChhhEEEeCCCCeEEEEEcchhhhcccCccccc
Confidence 89999999975 457999999999999999999999999 99999999999998 8899999999998876543 345
Q ss_pred ccCccCCCccccccCCC-CCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHHHHHHHHH
Q 014478 145 STNLAFTPPEYMRTGRV-TPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASR 223 (424)
Q Consensus 145 ~gt~~y~aPE~~~~~~~-~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 223 (424)
.||..|+|||++.+..+ +.++|||||||++|+|++|+.||..... ... .....+..++.++.++|.+
T Consensus 199 ~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~----------~~~--~~~~~~~~~~~~~~~li~~ 266 (312)
T 2iwi_A 199 DGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQE----------ILE--AELHFPAHVSPDCCALIRR 266 (312)
T ss_dssp CSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHH----------HHH--TCCCCCTTSCHHHHHHHHH
T ss_pred CCcccccCceeeecCCCCCccchHHHHHHHHHHHHHCCCCCCChHH----------Hhh--hccCCcccCCHHHHHHHHH
Confidence 68999999999987666 4589999999999999999988765311 111 1123455678899999999
Q ss_pred hcccCcCCCCCHHHHHHH
Q 014478 224 CLQSEARERPNAKSLVIS 241 (424)
Q Consensus 224 cl~~dp~~Rps~~~~~~~ 241 (424)
||+.||++|||+++++++
T Consensus 267 ~l~~~p~~Rps~~e~l~~ 284 (312)
T 2iwi_A 267 CLAPKPSSRPSLEEILLD 284 (312)
T ss_dssp HTCSSTTTSCCHHHHHHS
T ss_pred HccCChhhCcCHHHHhcC
Confidence 999999999999999875
|
| >3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.7e-39 Score=297.03 Aligned_cols=217 Identities=14% Similarity=0.091 Sum_probs=174.0
Q ss_pred CCCcccceeeee--cceecccccCCCc----hhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHhH
Q 014478 2 GGRCSKFSICWF--HCHLKSSVLESSD----LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKH 75 (424)
Q Consensus 2 G~~g~v~~~~~~--~~~v~~~~~~~~~----~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~ 75 (424)
|+||.||.+.+. +..|++|++.... ...+.|.+|+.++.+++||||+++++++..++..|+||||++|++|.++
T Consensus 42 G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~g~~L~~~ 121 (286)
T 3uqc_A 42 VPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHTRAGGLVVAEWIRGGSLQEV 121 (286)
T ss_dssp STTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCCEEEHHHH
T ss_pred cCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEECCcEEEEEEecCCCCHHHH
Confidence 899999999984 6788888886543 2347889999999999999999999999999999999999999999999
Q ss_pred hccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCCCccccCccCCCccc
Q 014478 76 LFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLAFTPPEY 155 (424)
Q Consensus 76 l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~gt~~y~aPE~ 155 (424)
+.. + ....++.+++.|++.||.|||+++ |+||||||+|||++.+|.+||+++| |++
T Consensus 122 l~~---~-~~~~~~~~i~~ql~~aL~~lH~~g-ivH~Dikp~NIll~~~g~~kl~~~~----------------~~~--- 177 (286)
T 3uqc_A 122 ADT---S-PSPVGAIRAMQSLAAAADAAHRAG-VALSIDHPSRVRVSIDGDVVLAYPA----------------TMP--- 177 (286)
T ss_dssp HTT---C-CCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCSGGGEEEETTSCEEECSCC----------------CCT---
T ss_pred Hhc---C-CChHHHHHHHHHHHHHHHHHHHCC-CccCCCCcccEEEcCCCCEEEEecc----------------ccC---
Confidence 943 2 466688999999999999999999 9999999999999999999998554 333
Q ss_pred cccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhccc--CCCCCchhHHHHHHHHHHhcccCcCCCC
Q 014478 156 MRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSAL--EGHFSNDEGTELVRLASRCLQSEARERP 233 (424)
Q Consensus 156 ~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~li~~cl~~dp~~Rp 233 (424)
+++.++|||||||++|||++|+.||.......... .......... .......+++++.++|.+||+.||++|
T Consensus 178 ----~~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~R- 251 (286)
T 3uqc_A 178 ----DANPQDDIRGIGASLYALLVNRWPLPEAGVRSGLA-PAERDTAGQPIEPADIDRDIPFQISAVAARSVQGDGGIR- 251 (286)
T ss_dssp ----TCCHHHHHHHHHHHHHHHHHSEECSCCCSBCCCSE-ECCBCTTSCBCCHHHHCTTSCHHHHHHHHHHHCTTSSCC-
T ss_pred ----CCCchhHHHHHHHHHHHHHHCCCCCCcCCcchhhH-HHHHHhccCCCChhhcccCCCHHHHHHHHHHcccCCccC-
Confidence 36889999999999999999998887642110000 0000000000 001224567889999999999999999
Q ss_pred CHHHHHHHHHHHhhh
Q 014478 234 NAKSLVISLMSLQKE 248 (424)
Q Consensus 234 s~~~~~~~l~~~~~~ 248 (424)
|+.++++.|..+...
T Consensus 252 s~~el~~~L~~~~~~ 266 (286)
T 3uqc_A 252 SASTLLNLMQQATAV 266 (286)
T ss_dssp CHHHHHHHHHHHHC-
T ss_pred CHHHHHHHHHHHhcc
Confidence 999999999987654
|
| >3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.9e-39 Score=321.50 Aligned_cols=237 Identities=16% Similarity=0.138 Sum_probs=187.3
Q ss_pred CCCcccceeee--ecceecccccCCC--chhhhHHHHHHHHHhcCCCcCcceeEEEEEe------CCeeeEEEecCCCCC
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESS--DLGETLNLEEAKAVGNLRSERLANLIGCCYE------ADERLLVAEFMPNET 71 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~--~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~------~~~~~lv~e~~~~gs 71 (424)
||||.||.+.+ .+..|++|++... ....+.+.+|++++++++||||+++++++.. ++..++||||++||+
T Consensus 25 G~fG~Vyla~~~~tg~~VAVKvi~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~~~~~LVmEy~~ggs 104 (676)
T 3qa8_A 25 GGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDLPLLAMEYCEGGD 104 (676)
T ss_dssp CSSSBCCCCCCTTTTCCEEECCCCSCCCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCTTSSCCCEEECCSSCB
T ss_pred CCCeEEEEEEECCCCcEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccCCCeEEEEEEeCCCCC
Confidence 89999999987 5677888877543 3446789999999999999999999999765 567899999999999
Q ss_pred HHhHhccCC-CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCC---eEEccccccccCCCC---Ccc
Q 014478 72 LAKHLFHWE-TQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGN---PRLSSFGLMKNSRDG---KSY 144 (424)
Q Consensus 72 L~~~l~~~~-~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~---~kl~Dfg~~~~~~~~---~~~ 144 (424)
|.+++.... ...+++..++.++.|++.||.|||+++ |+||||||+||+++.++. +||+|||+++..... ...
T Consensus 105 L~~~L~~~~~~~~lse~~i~~I~~QLl~aL~yLHs~g-IVHrDLKP~NILl~~~g~~~~vKL~DFG~a~~~~~~~~~~~~ 183 (676)
T 3qa8_A 105 LRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHENR-IIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTEF 183 (676)
T ss_dssp HHHHHHSSSCTTCCCSSHHHHHHHHHHHHHHHHHHTT-BCCCCCCSTTEEEECCSSSCEEEECSCCCCCBTTSCCCCCCC
T ss_pred HHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHCC-CccCCCCHHHeEeecCCCceeEEEcccccccccccccccccc
Confidence 999997532 236899999999999999999999999 999999999999987765 899999999876543 345
Q ss_pred ccCccCCCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHH-Hhhh---------hhhHhh--------hcccC
Q 014478 145 STNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDL-IRSK---------NFLLLM--------DSALE 206 (424)
Q Consensus 145 ~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~-~~~~---------~~~~~~--------~~~~~ 206 (424)
.||+.|+|||.+.+..++.++|||||||++|+|++|..||....... +... ...... .....
T Consensus 184 ~gt~~Y~APE~l~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~~~~~~~i~~~~~~~~~~~~~l~g~~~~~~~lp~p 263 (676)
T 3qa8_A 184 VGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQPVQWHGKVREKSNEHIVVYDDLTGAVKFSSVLPTP 263 (676)
T ss_dssp CSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHHHHSSCSSCCSSCHHHHSSTTCC------CCSCCCCSSSCCCCSSSCCS
T ss_pred cCCcccCChHHhccCCCCchhHHHHHHHHHHHHHHCCCCCCcccchhhhhhhhhcccchhhhhhhhhccccccccccCCc
Confidence 78999999999998899999999999999999999998886531110 0000 000000 00111
Q ss_pred CCCCchhHHHHHHHHHHhcccCcCCCCCHHHHH
Q 014478 207 GHFSNDEGTELVRLASRCLQSEARERPNAKSLV 239 (424)
Q Consensus 207 ~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~~~ 239 (424)
...+..+++.+.++|.+||..||++|||+.+++
T Consensus 264 ~~l~~~ls~~L~dLI~~mL~~DP~kRPTa~elL 296 (676)
T 3qa8_A 264 NHLSGILAGKLERWLQCMLMWHQRQRGTDPQNP 296 (676)
T ss_dssp CCCCGGGHHHHHHHHHHHSCSSCC---CCTTCC
T ss_pred hhhchhhhHHHHHHHHHHccCCHhhCcCHHHHh
Confidence 223456889999999999999999999998843
|
| >3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.8e-39 Score=312.38 Aligned_cols=227 Identities=14% Similarity=0.077 Sum_probs=172.2
Q ss_pred CCCcccceeeee--cceecccccCCCc----hhhhHHHHHHHHHhcCCC-cCcc---------------------eeEEE
Q 014478 2 GGRCSKFSICWF--HCHLKSSVLESSD----LGETLNLEEAKAVGNLRS-ERLA---------------------NLIGC 53 (424)
Q Consensus 2 G~~g~v~~~~~~--~~~v~~~~~~~~~----~~~~~~~~E~~~l~~l~h-~~iv---------------------~~~~~ 53 (424)
||||.||++.+. +..|++|++.... ...+.|.+|+.+++.++| +|+. .+..+
T Consensus 89 G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (413)
T 3dzo_A 89 EDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLVKDPQKKKMIRV 168 (413)
T ss_dssp ETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCEEEECCC-------
T ss_pred CCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchhhcccCCCCccccc
Confidence 899999999984 8889999876322 235788999999999977 3211 11111
Q ss_pred EEe-----CCeeeEEEecCCCCCHHhHhc-----cCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecC
Q 014478 54 CYE-----ADERLLVAEFMPNETLAKHLF-----HWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDK 123 (424)
Q Consensus 54 ~~~-----~~~~~lv~e~~~~gsL~~~l~-----~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~ 123 (424)
+.. ....+++|+++ +++|.+++. ......+++..++.++.||+.||.|||+++ |+||||||+|||++.
T Consensus 169 ~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~-iiHrDiKp~NILl~~ 246 (413)
T 3dzo_A 169 RLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYG-LVHTYLRPVDIVLDQ 246 (413)
T ss_dssp --------CCSEEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTT-EECSCCCGGGEEECT
T ss_pred cCCCccccccceEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHhCC-cccCCcccceEEEec
Confidence 111 12356777776 679999884 223456788899999999999999999999 999999999999999
Q ss_pred CCCeEEccccccccCCCC-CccccCccCCCcccc----------ccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHH
Q 014478 124 DGNPRLSSFGLMKNSRDG-KSYSTNLAFTPPEYM----------RTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLI 192 (424)
Q Consensus 124 ~~~~kl~Dfg~~~~~~~~-~~~~gt~~y~aPE~~----------~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~ 192 (424)
++.+||+|||+++..... ....| +.|+|||++ .+..++.++|||||||++|||++|+.||......
T Consensus 247 ~~~~kL~DFG~a~~~~~~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlGvil~elltg~~Pf~~~~~~-- 323 (413)
T 3dzo_A 247 RGGVFLTGFEHLVRDGASAVSPIG-RGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIYWIWCADLPNTDDAAL-- 323 (413)
T ss_dssp TCCEEECCGGGCEETTEEECCCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHHHHHHHHHHHSSCCCCTTGGG--
T ss_pred CCeEEEEeccceeecCCccccCCC-CceeCchhhhccccccccccCcCCCchhhHHHHHHHHHHHHHCCCCCCCcchh--
Confidence 999999999998865543 34467 999999999 5456888999999999999999999888764211
Q ss_pred hhhhhhHhhhcccCCCCCchhHHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 014478 193 RSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERPNAKSLVIS 241 (424)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~~~~~ 241 (424)
...... .. ....+++++.+||.+||+.||++|||+.+++++
T Consensus 324 --~~~~~~----~~--~~~~~~~~~~~li~~~l~~dP~~Rpt~~~~l~~ 364 (413)
T 3dzo_A 324 --GGSEWI----FR--SCKNIPQPVRALLEGFLRYPKEDRLLPLQAMET 364 (413)
T ss_dssp --SCSGGG----GS--SCCCCCHHHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred --hhHHHH----Hh--hcccCCHHHHHHHHHHccCChhhCcCHHHHHhC
Confidence 111111 11 112456889999999999999999999998765
|
| >3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-38 Score=292.87 Aligned_cols=217 Identities=14% Similarity=0.148 Sum_probs=171.8
Q ss_pred CCCcccceeee--ecceecccccCCCchhhhHHHHHHHHH-hcCCCcCcceeEEEEEe----CCeeeEEEecCCCCCHHh
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESSDLGETLNLEEAKAV-GNLRSERLANLIGCCYE----ADERLLVAEFMPNETLAK 74 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~~~~~~~~~~E~~~l-~~l~h~~iv~~~~~~~~----~~~~~lv~e~~~~gsL~~ 74 (424)
|++|.||.+.+ .+..+++|++... ..+.+|+.++ +.++||||+++++++.. +...++||||++||+|.+
T Consensus 29 G~~g~V~~~~~~~~~~~vaiK~~~~~----~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~ 104 (299)
T 3m2w_A 29 GINGKVLQIFNKRTQEKFALKMLQDC----PKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFS 104 (299)
T ss_dssp ETTEEEEEEEETTTCCEEEEEEEECS----HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEECCCCSCBHHH
T ss_pred CCCeEEEEEEEcCCCcEEEEEEeccc----HHHHHHHHHHHHhccCCCchhHHhhhhhhcCCCceEEEEEeecCCCcHHH
Confidence 89999999987 5667888887543 4567899888 55599999999999987 667899999999999999
Q ss_pred HhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecC---CCCeEEccccccccCCCCCccccCccCC
Q 014478 75 HLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDK---DGNPRLSSFGLMKNSRDGKSYSTNLAFT 151 (424)
Q Consensus 75 ~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~---~~~~kl~Dfg~~~~~~~~~~~~gt~~y~ 151 (424)
++.......+++.+++.++.|++.||.|||+++ ++||||||+|||++. ++.+||+|||++....
T Consensus 105 ~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~-i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~------------ 171 (299)
T 3m2w_A 105 RIQDRGDQAFTEREASEIMKSIGEAIQYLHSIN-IAHRDVKPENLLYTSKRPNAILKLTDFGFAKETT------------ 171 (299)
T ss_dssp HHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEESSSSTTCCEEECCCTTCEECT------------
T ss_pred HHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCC-cccCCCCHHHEEEecCCCCCcEEEeccccccccc------------
Confidence 997655567999999999999999999999999 999999999999987 7889999999886532
Q ss_pred CccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhcccCCCCC----chhHHHHHHHHHHhccc
Q 014478 152 PPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFS----NDEGTELVRLASRCLQS 227 (424)
Q Consensus 152 aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~l~~li~~cl~~ 227 (424)
+..++.++|||||||++|+|++|..||................... ....+ ..+++++.+++.+||+.
T Consensus 172 ------~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~li~~~l~~ 243 (299)
T 3m2w_A 172 ------GEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMG--QYEFPNPEWSEVSEEVKMLIRNLLKT 243 (299)
T ss_dssp ------TCGGGGHHHHHHHHHHHHHHHHSSCSCCC-------CCSCCSSCTT--CCSSCHHHHTTSCHHHHHHHHHHTCS
T ss_pred ------cccCCchhhHHHHHHHHHHHHHCCCCCCCCcchhhhHHHHHHHhhc--cccCCchhcccCCHHHHHHHHHHccc
Confidence 2457889999999999999999998886542211111110000000 11112 34678999999999999
Q ss_pred CcCCCCCHHHHHHHHH
Q 014478 228 EARERPNAKSLVISLM 243 (424)
Q Consensus 228 dp~~Rps~~~~~~~l~ 243 (424)
||.+|||+.+++++..
T Consensus 244 dP~~Rps~~e~l~hp~ 259 (299)
T 3m2w_A 244 EPTQRMTITEFMNHPW 259 (299)
T ss_dssp STTTSCCHHHHHTSHH
T ss_pred ChhhCCCHHHHhcChh
Confidence 9999999999997643
|
| >2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-38 Score=300.57 Aligned_cols=226 Identities=13% Similarity=0.030 Sum_probs=175.4
Q ss_pred CCCcccceeeeecceecccccCCCc---------hhhhHHHHHHHHHhcCC---------CcCcceeEEEEE--------
Q 014478 2 GGRCSKFSICWFHCHLKSSVLESSD---------LGETLNLEEAKAVGNLR---------SERLANLIGCCY-------- 55 (424)
Q Consensus 2 G~~g~v~~~~~~~~~v~~~~~~~~~---------~~~~~~~~E~~~l~~l~---------h~~iv~~~~~~~-------- 55 (424)
|+||.||.+.+.+..|++|++.... ...+.+.+|+.+++.++ ||||+++.+++.
T Consensus 31 G~~g~V~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~l~~~~~~~~~~hp~ 110 (336)
T 2vuw_A 31 GVFGEVFQTIADHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIGLNSVHCVQGSYPPL 110 (336)
T ss_dssp ETTEEEEEEEETTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCCEEEEEEEESSCCHH
T ss_pred cCceEEEEEEeCCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhhhcceeEecCCCcHH
Confidence 8999999999988899999886442 22367889999998886 777777777643
Q ss_pred ---------e-------------CCeeeEEEecCCCCCHHhHhccCCCCCCCHHHHHHHHHHHHHHHHHHH-hCCCcccc
Q 014478 56 ---------E-------------ADERLLVAEFMPNETLAKHLFHWETQPMKWAMRLRVALYLAQALEYCS-SKGRALYH 112 (424)
Q Consensus 56 ---------~-------------~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH-~~~~ivH~ 112 (424)
. ....+|||||+++|++.+.+. ...+++.++..++.||+.||.||| +++ |+||
T Consensus 111 iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~---~~~~~~~~~~~i~~qi~~aL~~lH~~~~-ivHr 186 (336)
T 2vuw_A 111 LLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMR---TKLSSLATAKSILHQLTASLAVAEASLR-FEHR 186 (336)
T ss_dssp HHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGT---TTCCCHHHHHHHHHHHHHHHHHHHHHHC-CBCS
T ss_pred HHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHH---hcCCCHHHHHHHHHHHHHHHHHHHHhCC-EeEC
Confidence 1 577899999999997777663 357899999999999999999999 899 9999
Q ss_pred cCCCCCeeecCCC--------------------CeEEccccccccCCCCCccccCccCCCccccccCCCCCCcceehhHH
Q 014478 113 DLNAYRILFDKDG--------------------NPRLSSFGLMKNSRDGKSYSTNLAFTPPEYMRTGRVTPESVVYSFGT 172 (424)
Q Consensus 113 dikp~Nill~~~~--------------------~~kl~Dfg~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~ 172 (424)
||||+|||++.++ .+||+|||+++..... ...||+.|||||++.+.. +.++||||||+
T Consensus 187 DlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~~-~~~gt~~y~aPE~~~g~~-~~~~Diwsl~~ 264 (336)
T 2vuw_A 187 DLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERDG-IVVFCDVSMDEDLFTGDG-DYQFDIYRLMK 264 (336)
T ss_dssp CCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEETT-EEECCCCTTCSGGGCCCS-SHHHHHHHHHH
T ss_pred CCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCCC-cEEEeecccChhhhcCCC-ccceehhhhhC
Confidence 9999999998887 8999999999876543 457999999999998665 88999999877
Q ss_pred H-HHHHhhCCCCCCchhhHHHhhhhhhHhhhc-----ccCCCCCchhHHHHHHHHHHhcccCcCCCCCHHHHH-HH
Q 014478 173 M-LLDLLSGKHIPPSHALDLIRSKNFLLLMDS-----ALEGHFSNDEGTELVRLASRCLQSEARERPNAKSLV-IS 241 (424)
Q Consensus 173 ~-l~el~~g~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~~~-~~ 241 (424)
+ .+++++|..||..... .......+... ......+..+++++.+||.+||+.| |+++++ +|
T Consensus 265 ~~~~~~~~g~~p~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~~L~~d-----sa~e~l~~H 332 (336)
T 2vuw_A 265 KENNNRWGEYHPYSNVLW---LHYLTDKMLKQMTFKTKCNTPAMKQIKRKIQEFHRTMLNFS-----SATDLLCQH 332 (336)
T ss_dssp HHHTTCTTSCCTHHHHHH---HHHHHHHHHHTCCCSSCCCSHHHHHHHHHHHHHHHHGGGSS-----SHHHHHHHC
T ss_pred CCCcccccccCCCcchhh---hhHHHHhhhhhhccCcccchhhhhhcCHHHHHHHHHHhccC-----CHHHHHhcC
Confidence 6 7788889877643211 01111111111 1111123357899999999999976 999988 54
|
| >4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-34 Score=287.89 Aligned_cols=164 Identities=13% Similarity=0.117 Sum_probs=125.5
Q ss_pred eeecceecccccCCC-----------chhhhHHHHHHHHHhcC-CCcCcceeEEEEEeCCeeeEEEecCCCCCHHhHhcc
Q 014478 11 CWFHCHLKSSVLESS-----------DLGETLNLEEAKAVGNL-RSERLANLIGCCYEADERLLVAEFMPNETLAKHLFH 78 (424)
Q Consensus 11 ~~~~~~v~~~~~~~~-----------~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~ 78 (424)
.+.+..+++|++... ....+.|.+|+++|+++ .|+||+++++++++++..||||||++|++|.++|..
T Consensus 256 ~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~~yLVMEyv~G~~L~d~i~~ 335 (569)
T 4azs_A 256 YFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQSGWLVMEKLPGRLLSDMLAA 335 (569)
T ss_dssp EEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSSEEEEEEECCCSEEHHHHHHT
T ss_pred ccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECCEEEEEEecCCCCcHHHHHHh
Confidence 457777788777543 23356799999999999 799999999999999999999999999999999975
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCC----CccccCccCCCcc
Q 014478 79 WETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG----KSYSTNLAFTPPE 154 (424)
Q Consensus 79 ~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~----~~~~gt~~y~aPE 154 (424)
+++++.. +|+.||+.||.|+|++| ||||||||+|||++.+|.+||+|||+++..... ....||+.|||||
T Consensus 336 --~~~l~~~---~I~~QIl~AL~ylH~~G-IIHRDIKPeNILL~~dg~vKL~DFGlAr~~~~~~~~~~t~vGTp~YmAPE 409 (569)
T 4azs_A 336 --GEEIDRE---KILGSLLRSLAALEKQG-FWHDDVRPWNVMVDARQHARLIDFGSIVTTPQDCSWPTNLVQSFFVFVNE 409 (569)
T ss_dssp --TCCCCHH---HHHHHHHHHHHHHHHTT-CEESCCCGGGEEECTTSCEEECCCTTEESCC---CCSHHHHHHHHHHHHH
T ss_pred --CCCCCHH---HHHHHHHHHHHHHHHCC-ceeccCchHhEEECCCCCEEEeecccCeeCCCCCccccCceechhhccHH
Confidence 5667764 58899999999999999 999999999999999999999999999876543 2346899999999
Q ss_pred ccccCCCCCCcceehhHHHHHHHhhCC
Q 014478 155 YMRTGRVTPESVVYSFGTMLLDLLSGK 181 (424)
Q Consensus 155 ~~~~~~~~~~~Dv~slG~~l~el~~g~ 181 (424)
++.+ .+..++|+||+|++++++.++.
T Consensus 410 ~l~g-~~~~~~d~~s~g~~~~~l~~~~ 435 (569)
T 4azs_A 410 LFAE-NKSWNGFWRSAPVHPFNLPQPW 435 (569)
T ss_dssp HC------------------CCCCTTH
T ss_pred HhCC-CCCCcccccccccchhhhcccc
Confidence 9984 5677899999999988876654
|
| >3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=6.1e-28 Score=240.54 Aligned_cols=169 Identities=11% Similarity=0.093 Sum_probs=141.4
Q ss_pred CCCcccceeeeecceecccccCCCc---------hhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCH
Q 014478 2 GGRCSKFSICWFHCHLKSSVLESSD---------LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETL 72 (424)
Q Consensus 2 G~~g~v~~~~~~~~~v~~~~~~~~~---------~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL 72 (424)
|+||.||++.+.+..+++|+..... ...+.+.+|+++|++++||||+++..++...+..+|||||++|++|
T Consensus 347 G~fg~Vy~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lVmE~~~ggsL 426 (540)
T 3en9_A 347 GAEADIKRDSYLDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLDNKRIMMSYINGKLA 426 (540)
T ss_dssp -CCEEEEEEECSSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEETTTTEEEEECCCSEEH
T ss_pred CCCEEEEEEEECCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeCCccEEEEECCCCCCH
Confidence 8999999998888777776543221 1134689999999999999999776666677788999999999999
Q ss_pred HhHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCC-----------
Q 014478 73 AKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG----------- 141 (424)
Q Consensus 73 ~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~----------- 141 (424)
.+++.. +..++.|++.||.|||+++ |+||||||+|||++. .+||+|||+++.....
T Consensus 427 ~~~l~~----------~~~i~~qi~~aL~~LH~~g-IiHrDiKp~NILl~~--~~kL~DFGla~~~~~~~~~~~~~~~~~ 493 (540)
T 3en9_A 427 KDVIED----------NLDIAYKIGEIVGKLHKND-VIHNDLTTSNFIFDK--DLYIIDFGLGKISNLDEDKAVDLIVFK 493 (540)
T ss_dssp HHHSTT----------CTHHHHHHHHHHHHHHHTT-EECTTCCTTSEEESS--SEEECCCTTCEECCCHHHHHHHHHHHH
T ss_pred HHHHHH----------HHHHHHHHHHHHHHHHHCc-CccCCCCHHHEEECC--eEEEEECccCEECCCccccccchhhhh
Confidence 999953 5689999999999999999 999999999999998 9999999999987653
Q ss_pred CccccCccCCCcccccc--CCCCCCcceehhHHHHHHHhhCCCC
Q 014478 142 KSYSTNLAFTPPEYMRT--GRVTPESVVYSFGTMLLDLLSGKHI 183 (424)
Q Consensus 142 ~~~~gt~~y~aPE~~~~--~~~~~~~Dv~slG~~l~el~~g~~~ 183 (424)
....||+.|||||++.. ..|+..+|+||..+-..+.+.++.+
T Consensus 494 ~~~~GT~~y~APEv~~~~~~~Y~~~~d~ws~vl~~l~~v~~r~r 537 (540)
T 3en9_A 494 KAVLSTHHEKFDEIWERFLEGYKSVYDRWEIILELMKDVERRAR 537 (540)
T ss_dssp HHHHHHCGGGHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHTCSC
T ss_pred hhhcCCCCcCCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhccc
Confidence 24568999999999986 5688889999999888887766533
|
| >1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A* | Back alignment and structure |
|---|
Probab=99.86 E-value=8.9e-23 Score=186.73 Aligned_cols=132 Identities=12% Similarity=0.065 Sum_probs=106.6
Q ss_pred CCCcccceeee-ecceecccccCCCc-------------------hhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeee
Q 014478 2 GGRCSKFSICW-FHCHLKSSVLESSD-------------------LGETLNLEEAKAVGNLRSERLANLIGCCYEADERL 61 (424)
Q Consensus 2 G~~g~v~~~~~-~~~~v~~~~~~~~~-------------------~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 61 (424)
|++|.||.+.+ .+..+++|++.... .....+.+|+.+|++++ | +++.+++.. +..+
T Consensus 101 G~~g~Vy~~~~~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~--~-~~v~~~~~~-~~~~ 176 (282)
T 1zar_A 101 GKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQ--G-LAVPKVYAW-EGNA 176 (282)
T ss_dssp CSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTT--T-SSSCCEEEE-ETTE
T ss_pred CCCceEEEEEeCCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhcc--C-CCcCeEEec-cceE
Confidence 89999999998 46678888875332 13457889999999999 4 566665544 4569
Q ss_pred EEEecCCCCCHHhHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCC
Q 014478 62 LVAEFMPNETLAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG 141 (424)
Q Consensus 62 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~ 141 (424)
+||||++||+|.+ +.. .....++.|++.||.|||+++ |+||||||+|||++ ++.+||+|||+++.
T Consensus 177 lvmE~~~g~~L~~-l~~--------~~~~~i~~qi~~~l~~lH~~g-iiHrDlkp~NILl~-~~~vkl~DFG~a~~---- 241 (282)
T 1zar_A 177 VLMELIDAKELYR-VRV--------ENPDEVLDMILEEVAKFYHRG-IVHGDLSQYNVLVS-EEGIWIIDFPQSVE---- 241 (282)
T ss_dssp EEEECCCCEEGGG-CCC--------SCHHHHHHHHHHHHHHHHHTT-EECSCCSTTSEEEE-TTEEEECCCTTCEE----
T ss_pred EEEEecCCCcHHH-cch--------hhHHHHHHHHHHHHHHHHHCC-CEeCCCCHHHEEEE-CCcEEEEECCCCeE----
Confidence 9999999999998 521 234579999999999999999 99999999999999 99999999999874
Q ss_pred CccccCccCCCccccc
Q 014478 142 KSYSTNLAFTPPEYMR 157 (424)
Q Consensus 142 ~~~~gt~~y~aPE~~~ 157 (424)
+..++|||.+.
T Consensus 242 -----~~~~~a~e~l~ 252 (282)
T 1zar_A 242 -----VGEEGWREILE 252 (282)
T ss_dssp -----TTSTTHHHHHH
T ss_pred -----CCCCCHHHHHH
Confidence 34568899876
|
| >4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans} | Back alignment and structure |
|---|
Probab=99.84 E-value=4.2e-20 Score=147.82 Aligned_cols=104 Identities=18% Similarity=0.292 Sum_probs=100.7
Q ss_pred HHHHHHHHHHhHHHhhCCHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhcCCCchHHHHHHHH
Q 014478 317 QETLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAA 396 (424)
Q Consensus 317 ~~~~~~~~~g~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~ 396 (424)
..+..++.+|+.+++.|+|++|++.|++||+++|. +..+|.++|.+|.++|++++|+.+|++||+++|+++.+|+++|.
T Consensus 11 ~~a~~~~~~G~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~lg~ 89 (126)
T 4gco_A 11 ELAQEEKNKGNEYFKKGDYPTAMRHYNEAVKRDPE-NAILYSNRAACLTKLMEFQRALDDCDTCIRLDSKFIKGYIRKAA 89 (126)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-CHHHHHHHhhHHHhhccHHHHHHHHHHHHHhhhhhhHHHHHHHH
Confidence 45678889999999999999999999999999999 99999999999999999999999999999999999999999999
Q ss_pred HHHhCCChHHHHHHHHHHHhchhhc
Q 014478 397 CLFSLGMENDARETLKDGTNLEAKK 421 (424)
Q Consensus 397 ~~~~~~~~~~A~~~~~~al~l~~~~ 421 (424)
++..+|++++|+.+|+++++++|++
T Consensus 90 ~~~~~~~~~~A~~~~~~al~l~P~~ 114 (126)
T 4gco_A 90 CLVAMREWSKAQRAYEDALQVDPSN 114 (126)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHCTTC
T ss_pred HHHHCCCHHHHHHHHHHHHHHCcCC
Confidence 9999999999999999999999975
|
| >2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8 | Back alignment and structure |
|---|
Probab=99.82 E-value=9e-20 Score=149.00 Aligned_cols=108 Identities=15% Similarity=0.075 Sum_probs=101.1
Q ss_pred hHHHHHHHHHHHhHHHhhCCHHHHHHHHHHHhcCCCCC------C-----HHHHHHHHHHHHhcCChHHHHHHHHHHHhc
Q 014478 315 QMQETLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMV------S-----PTVYARRCLSYLMNDMPQEALGDAMQAQVV 383 (424)
Q Consensus 315 ~~~~~~~~~~~g~~~~~~g~~~~A~~~~~~ai~~~p~~------~-----~~~~~~~~~~~~~~~~~~~A~~~~~~al~~ 383 (424)
....+..++..|+.+++.|+|++|++.|++||+++|+. + ..+|+|+|.++.++|+|++|+.+|++||++
T Consensus 7 ~~~~a~~~~~~G~~l~~~g~~eeAi~~Y~kAL~l~p~~~~~~a~~~~~~~a~a~~n~g~al~~Lgr~~eAl~~~~kAL~l 86 (159)
T 2hr2_A 7 EVVGAYLALSDAQRQLVAGEYDEAAANCRRAMEISHTMPPEEAFDHAGFDAFCHAGLAEALAGLRSFDEALHSADKALHY 86 (159)
T ss_dssp HHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTSCTTSCCCHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHhhCCCCcchhhhhhccchHHHHHHHHHHHHHCCCHHHHHHHHHHHHHh
Confidence 45678899999999999999999999999999999982 1 239999999999999999999999999999
Q ss_pred -------CCCchHHH----HHHHHHHHhCCChHHHHHHHHHHHhchhhcC
Q 014478 384 -------SPDWPTAL----YLQAACLFSLGMENDARETLKDGTNLEAKKN 422 (424)
Q Consensus 384 -------~p~~~~a~----~~~g~~~~~~~~~~~A~~~~~~al~l~~~~~ 422 (424)
+|+++++| +++|.++..+|++++|+.+|++|++++|.+.
T Consensus 87 ~n~~~e~~pd~~~A~~~~~~~rG~aL~~lgr~eEAl~~y~kAlel~p~d~ 136 (159)
T 2hr2_A 87 FNRRGELNQDEGKLWISAVYSRALALDGLGRGAEAMPEFKKVVEMIEERK 136 (159)
T ss_dssp HHHHCCTTSTHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHCC
T ss_pred hhccccCCCchHHHHHHHHHhHHHHHHHCCCHHHHHHHHHHHHhcCCCcH
Confidence 99999999 9999999999999999999999999999864
|
| >3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A | Back alignment and structure |
|---|
Probab=99.77 E-value=4.4e-18 Score=140.25 Aligned_cols=105 Identities=10% Similarity=-0.027 Sum_probs=100.4
Q ss_pred HHHHHHHHHHHhHHHhhCCHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhcCCCchHHHHHHH
Q 014478 316 MQETLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQA 395 (424)
Q Consensus 316 ~~~~~~~~~~g~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g 395 (424)
......+...|..+++.|+|++|++.|+++++++|+ +..+|+++|.+|..+|++++|+..|++|++++|+++.+|+++|
T Consensus 33 p~~~~~~~~lg~~~~~~g~~~eA~~~~~~al~~~P~-~~~~~~~lg~~~~~~g~~~~Ai~~~~~al~l~P~~~~~~~~lg 111 (151)
T 3gyz_A 33 DDMMDDIYSYAYDFYNKGRIEEAEVFFRFLCIYDFY-NVDYIMGLAAIYQIKEQFQQAADLYAVAFALGKNDYTPVFHTG 111 (151)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSSSCCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHHccHHHHHHHHHHHHhhCCCCcHHHHHHH
Confidence 345667889999999999999999999999999999 9999999999999999999999999999999999999999999
Q ss_pred HHHHhCCChHHHHHHHHHHHhchhhc
Q 014478 396 ACLFSLGMENDARETLKDGTNLEAKK 421 (424)
Q Consensus 396 ~~~~~~~~~~~A~~~~~~al~l~~~~ 421 (424)
.+|..+|++++|+.+|++|++++|..
T Consensus 112 ~~~~~lg~~~eA~~~~~~al~l~~~~ 137 (151)
T 3gyz_A 112 QCQLRLKAPLKAKECFELVIQHSNDE 137 (151)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHCCCH
T ss_pred HHHHHcCCHHHHHHHHHHHHHhCCCH
Confidence 99999999999999999999999863
|
| >1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A* | Back alignment and structure |
|---|
Probab=99.76 E-value=1e-18 Score=157.85 Aligned_cols=126 Identities=13% Similarity=0.067 Sum_probs=98.2
Q ss_pred CCCcccceeee--ecce--ecccccCCCch-------------------------hhhHHHHHHHHHhcCCCcCc--cee
Q 014478 2 GGRCSKFSICW--FHCH--LKSSVLESSDL-------------------------GETLNLEEAKAVGNLRSERL--ANL 50 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~--v~~~~~~~~~~-------------------------~~~~~~~E~~~l~~l~h~~i--v~~ 50 (424)
|++|.||.+.+ .+.. +++|++..... ....+.+|+++|..+.|++| +.+
T Consensus 58 G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~ 137 (258)
T 1zth_A 58 GKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERAKEAGVSVPQP 137 (258)
T ss_dssp CSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHHHHTTCCCCCE
T ss_pred cceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHHHhCCCCCCeE
Confidence 89999999998 6777 88887543211 11367899999999988754 445
Q ss_pred EEEEEeCCeeeEEEecCCC-C----CHHhHhccCCCCCCCHHHHHHHHHHHHHHHHHHH-hCCCcccccCCCCCeeecCC
Q 014478 51 IGCCYEADERLLVAEFMPN-E----TLAKHLFHWETQPMKWAMRLRVALYLAQALEYCS-SKGRALYHDLNAYRILFDKD 124 (424)
Q Consensus 51 ~~~~~~~~~~~lv~e~~~~-g----sL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH-~~~~ivH~dikp~Nill~~~ 124 (424)
++. ...+|||||+.+ | +|.++... .++..+..++.|++.+|.||| +.+ |+||||||+|||++.
T Consensus 138 ~~~----~~~~lVmE~~g~~g~~~~~L~~~~~~-----~~~~~~~~i~~qi~~~l~~lH~~~g-ivHrDlkp~NILl~~- 206 (258)
T 1zth_A 138 YTY----MKNVLLMEFIGEDELPAPTLVELGRE-----LKELDVEGIFNDVVENVKRLYQEAE-LVHADLSEYNIMYID- 206 (258)
T ss_dssp EEE----ETTEEEEECCEETTEECCBHHHHGGG-----GGGSCHHHHHHHHHHHHHHHHHTSC-EECSSCSTTSEEESS-
T ss_pred EEc----CCCEEEEEecCCCCCccccHHHHhhc-----cChHHHHHHHHHHHHHHHHHHHHCC-EEeCCCCHHHEEEcC-
Confidence 543 246899999942 3 77776532 235567899999999999999 899 999999999999988
Q ss_pred CCeEEccccccccCC
Q 014478 125 GNPRLSSFGLMKNSR 139 (424)
Q Consensus 125 ~~~kl~Dfg~~~~~~ 139 (424)
.++|+|||++....
T Consensus 207 -~~~liDFG~a~~~~ 220 (258)
T 1zth_A 207 -KVYFIDMGQAVTLR 220 (258)
T ss_dssp -SEEECCCTTCEETT
T ss_pred -cEEEEECcccccCC
Confidence 89999999987653
|
| >4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans} | Back alignment and structure |
|---|
Probab=99.75 E-value=8.1e-18 Score=134.65 Aligned_cols=103 Identities=17% Similarity=0.145 Sum_probs=96.9
Q ss_pred HHHHHHHHHHhHHHhhCCHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhcCCCch-------H
Q 014478 317 QETLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWP-------T 389 (424)
Q Consensus 317 ~~~~~~~~~g~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~-------~ 389 (424)
..+..+++.|+.+++.|+|++|++.|++||+++|+ +..+|+++|.+|..+|++++|+.++++||+++|++. .
T Consensus 6 d~A~a~~~lG~~~~~~~~~~~A~~~y~~Al~~~p~-~~~~~~nlg~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~a~ 84 (127)
T 4gcn_A 6 DAAIAEKDLGNAAYKQKDFEKAHVHYDKAIELDPS-NITFYNNKAAVYFEEKKFAECVQFCEKAVEVGRETRADYKLIAK 84 (127)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-CHHHHHhHHHHHHHhhhHHHHHHHHHHHHHhCcccchhhHHHHH
Confidence 45667889999999999999999999999999999 999999999999999999999999999999998874 5
Q ss_pred HHHHHHHHHHhCCChHHHHHHHHHHHhchhh
Q 014478 390 ALYLQAACLFSLGMENDARETLKDGTNLEAK 420 (424)
Q Consensus 390 a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~ 420 (424)
+|+++|.++..+|++++|+++|+++++++|+
T Consensus 85 ~~~~lg~~~~~~~~~~~A~~~~~kal~~~~~ 115 (127)
T 4gcn_A 85 AMSRAGNAFQKQNDLSLAVQWFHRSLSEFRD 115 (127)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHSCC
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHhhCcC
Confidence 8999999999999999999999999998764
|
| >3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.73 E-value=3.9e-17 Score=130.18 Aligned_cols=100 Identities=20% Similarity=0.262 Sum_probs=97.8
Q ss_pred HHHHHHHHHhHHHhhCCHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhcCCCchHHHHHHHHH
Q 014478 318 ETLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAAC 397 (424)
Q Consensus 318 ~~~~~~~~g~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~ 397 (424)
.+..+...|..+++.|+|++|++.|+++++.+|+ +..+|.++|.+|.++|++++|+..++++++++|+++.+|+++|.+
T Consensus 3 ~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~-~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~ 81 (126)
T 3upv_A 3 KAEEARLEGKEYFTKSDWPNAVKAYTEMIKRAPE-DARGYSNRAAALAKLMSFPEAIADCNKAIEKDPNFVRAYIRKATA 81 (126)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCC-ChHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCcHHHHHHHHHH
Confidence 4678889999999999999999999999999999 999999999999999999999999999999999999999999999
Q ss_pred HHhCCChHHHHHHHHHHHhch
Q 014478 398 LFSLGMENDARETLKDGTNLE 418 (424)
Q Consensus 398 ~~~~~~~~~A~~~~~~al~l~ 418 (424)
+..+|++++|+..|+++++++
T Consensus 82 ~~~~~~~~~A~~~~~~al~~~ 102 (126)
T 3upv_A 82 QIAVKEYASALETLDAARTKD 102 (126)
T ss_dssp HHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHhCHHHHHHHHHHHHHhC
Confidence 999999999999999999999
|
| >3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans} | Back alignment and structure |
|---|
Probab=99.73 E-value=1.6e-17 Score=138.81 Aligned_cols=106 Identities=20% Similarity=0.196 Sum_probs=100.4
Q ss_pred HHHHHHHHHHHhHHHhhCCHHHHHHHHHHHhcC------------------CCCCCHHHHHHHHHHHHhcCChHHHHHHH
Q 014478 316 MQETLNSKKHGDTAFRAKDFSTAIDCYTQFIDG------------------GTMVSPTVYARRCLSYLMNDMPQEALGDA 377 (424)
Q Consensus 316 ~~~~~~~~~~g~~~~~~g~~~~A~~~~~~ai~~------------------~p~~~~~~~~~~~~~~~~~~~~~~A~~~~ 377 (424)
...+..++..|+.+++.|+|++|+..|++|+++ +|. ...+|.++|.||.++|++++|+.++
T Consensus 8 ~~~a~~~~~~G~~~~~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~nla~~~~~~~~~~~A~~~~ 86 (162)
T 3rkv_A 8 LKSVEALRQKGNELFVQKDYKEAIDAYRDALTRLDTLILREKPGEPEWVELDRK-NIPLYANMSQCYLNIGDLHEAEETS 86 (162)
T ss_dssp CHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHTSCTTSHHHHHHHHT-HHHHHHHHHHHHHHHTCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHH-HHHHHHHHHHHHHhcCcHHHHHHHH
Confidence 356778999999999999999999999999999 666 7789999999999999999999999
Q ss_pred HHHHhcCCCchHHHHHHHHHHHhCCChHHHHHHHHHHHhchhhcC
Q 014478 378 MQAQVVSPDWPTALYLQAACLFSLGMENDARETLKDGTNLEAKKN 422 (424)
Q Consensus 378 ~~al~~~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~~ 422 (424)
++||+++|+++++|+++|.+|..+|++++|+.+|++|++++|.+.
T Consensus 87 ~~al~~~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~p~~~ 131 (162)
T 3rkv_A 87 SEVLKREETNEKALFRRAKARIAAWKLDEAEEDLKLLLRNHPAAA 131 (162)
T ss_dssp HHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCGGGH
T ss_pred HHHHhcCCcchHHHHHHHHHHHHHhcHHHHHHHHHHHHhcCCCCH
Confidence 999999999999999999999999999999999999999999853
|
| >2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A* | Back alignment and structure |
|---|
Probab=99.70 E-value=2.2e-16 Score=129.89 Aligned_cols=104 Identities=12% Similarity=0.057 Sum_probs=99.6
Q ss_pred HHHHHHHHHHhHHHhhCCHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhcCCCchHHHHHHHH
Q 014478 317 QETLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAA 396 (424)
Q Consensus 317 ~~~~~~~~~g~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~ 396 (424)
.....+...|..++..|+|++|+..|+++++.+|. +..+|+++|.+|..+|++++|+..|++|+.++|+++.+++++|.
T Consensus 19 ~~~~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~lg~ 97 (148)
T 2vgx_A 19 DTLEQLYSLAFNQYQSGXYEDAHXVFQALCVLDHY-DSRFFLGLGACRQAMGQYDLAIHSYSYGAVMDIXEPRFPFHAAE 97 (148)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCTHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHcCChHHHHHHHHHHHHcCcc-cHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCCchHHHHHHH
Confidence 45667788999999999999999999999999999 99999999999999999999999999999999999999999999
Q ss_pred HHHhCCChHHHHHHHHHHHhchhhc
Q 014478 397 CLFSLGMENDARETLKDGTNLEAKK 421 (424)
Q Consensus 397 ~~~~~~~~~~A~~~~~~al~l~~~~ 421 (424)
+|..+|++++|+..|+++++++|.+
T Consensus 98 ~~~~~g~~~~A~~~~~~al~~~p~~ 122 (148)
T 2vgx_A 98 CLLQXGELAEAESGLFLAQELIANX 122 (148)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHHTTC
T ss_pred HHHHcCCHHHHHHHHHHHHHHCcCC
Confidence 9999999999999999999999864
|
| >3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus} | Back alignment and structure |
|---|
Probab=99.69 E-value=2.3e-16 Score=131.89 Aligned_cols=105 Identities=27% Similarity=0.365 Sum_probs=101.3
Q ss_pred HHHHHHHHHHhHHHhhCCHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhcCCCchHHHHHHHH
Q 014478 317 QETLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAA 396 (424)
Q Consensus 317 ~~~~~~~~~g~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~ 396 (424)
..+..+...|..+++.|+|++|++.|+++++++|+ +..+|+++|.+|..+|++++|+..|+++++++|+++.+|+++|.
T Consensus 9 ~~a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~ 87 (164)
T 3sz7_A 9 PESDKLKSEGNAAMARKEYSKAIDLYTQALSIAPA-NPIYLSNRAAAYSASGQHEKAAEDAELATVVDPKYSKAWSRLGL 87 (164)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCc-CHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHH
Confidence 45778889999999999999999999999999999 99999999999999999999999999999999999999999999
Q ss_pred HHHhCCChHHHHHHHHHHHhchhhcC
Q 014478 397 CLFSLGMENDARETLKDGTNLEAKKN 422 (424)
Q Consensus 397 ~~~~~~~~~~A~~~~~~al~l~~~~~ 422 (424)
+|..+|++++|+.+|+++++++|++.
T Consensus 88 ~~~~~g~~~~A~~~~~~al~~~p~~~ 113 (164)
T 3sz7_A 88 ARFDMADYKGAKEAYEKGIEAEGNGG 113 (164)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHHSSSC
T ss_pred HHHHccCHHHHHHHHHHHHHhCCCch
Confidence 99999999999999999999999764
|
| >2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A | Back alignment and structure |
|---|
Probab=99.68 E-value=4.8e-16 Score=126.73 Aligned_cols=104 Identities=13% Similarity=0.109 Sum_probs=99.5
Q ss_pred HHHHHHHHHHhHHHhhCCHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhcCCCchHHHHHHHH
Q 014478 317 QETLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAA 396 (424)
Q Consensus 317 ~~~~~~~~~g~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~ 396 (424)
.....+...|..+++.|+|++|+..|+++++.+|+ +..+|.++|.+|..+|++++|+..|++|+.++|+++.+++++|.
T Consensus 16 ~~~~~~~~~a~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~ 94 (142)
T 2xcb_A 16 DTLEQLYALGFNQYQAGKWDDAQKIFQALCMLDHY-DARYFLGLGACRQSLGLYEQALQSYSYGALMDINEPRFPFHAAE 94 (142)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHccHHHHHHHHHHHHHhCCc-cHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCCcHHHHHHHH
Confidence 34567788999999999999999999999999999 99999999999999999999999999999999999999999999
Q ss_pred HHHhCCChHHHHHHHHHHHhchhhc
Q 014478 397 CLFSLGMENDARETLKDGTNLEAKK 421 (424)
Q Consensus 397 ~~~~~~~~~~A~~~~~~al~l~~~~ 421 (424)
+|..+|++++|+..|+++++++|.+
T Consensus 95 ~~~~~g~~~~A~~~~~~al~~~p~~ 119 (142)
T 2xcb_A 95 CHLQLGDLDGAESGFYSARALAAAQ 119 (142)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHHHTC
T ss_pred HHHHcCCHHHHHHHHHHHHHhCCCC
Confidence 9999999999999999999999864
|
| >4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A* | Back alignment and structure |
|---|
Probab=99.68 E-value=1.7e-16 Score=130.84 Aligned_cols=104 Identities=13% Similarity=0.135 Sum_probs=97.7
Q ss_pred HHHHHHHHHHhHHHhhCCHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhcCCCchHHHHHHHH
Q 014478 317 QETLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAA 396 (424)
Q Consensus 317 ~~~~~~~~~g~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~ 396 (424)
......+..|..+++.|+|++|++.|+++|+++|+ +..+|+++|.+|..+|++++|+..|+++++++|+++.+|+++|.
T Consensus 29 ~~~~~~~~la~~y~~~~~~~~A~~~~~~al~~~p~-~~~a~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~ 107 (150)
T 4ga2_A 29 QKSIKGFYFAKLYYEAKEYDLAKKYICTYINVQER-DPKAHRFLGLLYELEENTDKAVECYRRSVELNPTQKDLVLKIAE 107 (150)
T ss_dssp HHHTTHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHcCchHHHHHHHHHHHHhCCCCHHHHHHHHH
Confidence 44556678899999999999999999999999999 99999999999999999999999999999999999999999999
Q ss_pred HHHhCCChHHHHHH-HHHHHhchhhc
Q 014478 397 CLFSLGMENDARET-LKDGTNLEAKK 421 (424)
Q Consensus 397 ~~~~~~~~~~A~~~-~~~al~l~~~~ 421 (424)
+|..+|++++|... +++|++++|++
T Consensus 108 ~~~~~~~~~~aa~~~~~~al~l~P~~ 133 (150)
T 4ga2_A 108 LLCKNDVTDGRAKYWVERAAKLFPGS 133 (150)
T ss_dssp HHHHHCSSSSHHHHHHHHHHHHSTTC
T ss_pred HHHHcCChHHHHHHHHHHHHHhCcCC
Confidence 99999999988776 59999999975
|
| >1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1 | Back alignment and structure |
|---|
Probab=99.68 E-value=1.8e-16 Score=125.54 Aligned_cols=102 Identities=12% Similarity=0.030 Sum_probs=93.3
Q ss_pred HHHHHHHhHHHhhCCHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhcCCCchHHHHHHHHHHH
Q 014478 320 LNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAACLF 399 (424)
Q Consensus 320 ~~~~~~g~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~ 399 (424)
..+...|..+++.|++++|+..|+++++.+|+ +..+|+++|.++..+|++++|+..+++|++++|+++.+++++|.++.
T Consensus 18 ~~~~~~g~~~~~~g~~~~A~~~~~~al~~~P~-~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~~~~~~~la~~~~ 96 (121)
T 1hxi_A 18 ENPMEEGLSMLKLANLAEAALAFEAVCQKEPE-REEAWRSLGLTQAENEKDGLAIIALNHARMLDPKDIAVHAALAVSHT 96 (121)
T ss_dssp SCHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHcCCHHHHHHHHHHHHHHCCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Confidence 35677899999999999999999999999999 99999999999999999999999999999999999999999999999
Q ss_pred hCCChHHHHHHHHHHHhchhhcC
Q 014478 400 SLGMENDARETLKDGTNLEAKKN 422 (424)
Q Consensus 400 ~~~~~~~A~~~~~~al~l~~~~~ 422 (424)
.+|++++|+..|+++++++|...
T Consensus 97 ~~g~~~~A~~~~~~al~~~P~~~ 119 (121)
T 1hxi_A 97 NEHNANAALASLRAWLLSQPQYE 119 (121)
T ss_dssp HHHHHHHHHHHHHHHHC------
T ss_pred HcCCHHHHHHHHHHHHHhCcCCC
Confidence 99999999999999999999753
|
| >3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B* | Back alignment and structure |
|---|
Probab=99.63 E-value=3.6e-15 Score=120.17 Aligned_cols=102 Identities=22% Similarity=0.406 Sum_probs=98.9
Q ss_pred HHHHHHHHHhHHHhhCCHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhcCCCchHHHHHHHHH
Q 014478 318 ETLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAAC 397 (424)
Q Consensus 318 ~~~~~~~~g~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~ 397 (424)
.+..+...|..++..|+|++|+..|.++++.+|+ +..++.++|.+|..+|++++|+..++++++++|+++.+++++|.+
T Consensus 8 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~-~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~ 86 (137)
T 3q49_B 8 SAQELKEQGNRLFVGRKYPEAAACYGRAITRNPL-VAVYYTNRALCYLKMQQPEQALADCRRALELDGQSVKAHFFLGQC 86 (137)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHhCcHHHHHHHHHHHHhhCcC-cHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCchhHHHHHHHHHH
Confidence 3567889999999999999999999999999999 999999999999999999999999999999999999999999999
Q ss_pred HHhCCChHHHHHHHHHHHhchhh
Q 014478 398 LFSLGMENDARETLKDGTNLEAK 420 (424)
Q Consensus 398 ~~~~~~~~~A~~~~~~al~l~~~ 420 (424)
+..+|++++|+..|+++++++|+
T Consensus 87 ~~~~~~~~~A~~~~~~a~~~~p~ 109 (137)
T 3q49_B 87 QLEMESYDEAIANLQRAYSLAKE 109 (137)
T ss_dssp HHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHhhHHHHHHHHHHHHHHChh
Confidence 99999999999999999999997
|
| >1zu2_A Mitochondrial import receptor subunit TOM20-3; TPR, tetratricopeptide repeat like, TPR-like, transport protein; NMR {Arabidopsis thaliana} SCOP: a.118.8.1 | Back alignment and structure |
|---|
Probab=99.62 E-value=3.2e-16 Score=127.71 Aligned_cols=91 Identities=13% Similarity=0.047 Sum_probs=85.4
Q ss_pred HhhCCHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHhcCCh----------HHHHHHHHHHHhcCCCchHHHHHHHHHHH
Q 014478 330 FRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMP----------QEALGDAMQAQVVSPDWPTALYLQAACLF 399 (424)
Q Consensus 330 ~~~g~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~----------~~A~~~~~~al~~~p~~~~a~~~~g~~~~ 399 (424)
-+.++|++|++.|+++++++|+ +..+|+++|.++..++++ ++|+..|++||+++|++.++|+++|.+|.
T Consensus 13 ~r~~~feeA~~~~~~Ai~l~P~-~aea~~n~G~~l~~l~~~~~g~~al~~~~eAi~~le~AL~ldP~~~~A~~~LG~ay~ 91 (158)
T 1zu2_A 13 DRILLFEQIRQDAENTYKSNPL-DADNLTRWGGVLLELSQFHSISDAKQMIQEAITKFEEALLIDPKKDEAVWCIGNAYT 91 (158)
T ss_dssp HHHHHHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHhHHHHHHHHHHHHHHHCCC-CHHHHHHHHHHHHHhcccchhhhhHhHHHHHHHHHHHHHHhCcCcHHHHHHHHHHHH
Confidence 3557899999999999999999 999999999999999875 59999999999999999999999999999
Q ss_pred hCC-----------ChHHHHHHHHHHHhchhhc
Q 014478 400 SLG-----------MENDARETLKDGTNLEAKK 421 (424)
Q Consensus 400 ~~~-----------~~~~A~~~~~~al~l~~~~ 421 (424)
.+| ++++|+++|++|++++|++
T Consensus 92 ~lg~l~P~~~~a~g~~~eA~~~~~kAl~l~P~~ 124 (158)
T 1zu2_A 92 SFAFLTPDETEAKHNFDLATQFFQQAVDEQPDN 124 (158)
T ss_dssp HHHHHCCCHHHHHHHHHHHHHHHHHHHHHCTTC
T ss_pred HhcccCcchhhhhccHHHHHHHHHHHHHhCCCC
Confidence 885 8999999999999999974
|
| >3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus} | Back alignment and structure |
|---|
Probab=99.61 E-value=1.9e-15 Score=131.75 Aligned_cols=103 Identities=19% Similarity=0.090 Sum_probs=96.5
Q ss_pred HHHHHHHHHhHHHhhCCHHHHHHHHHHHhcCCCCCCHHHHHH----------------HHHHHHhcCChHHHHHHHHHHH
Q 014478 318 ETLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYAR----------------RCLSYLMNDMPQEALGDAMQAQ 381 (424)
Q Consensus 318 ~~~~~~~~g~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~~~~----------------~~~~~~~~~~~~~A~~~~~~al 381 (424)
.+..++.+|..++..|+|++|+..|+++++.+|+ +..+++. +|.+|.++|++++|+..|++++
T Consensus 3 ~~~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al 81 (208)
T 3urz_A 3 SVDEMLQKVSAAIEAGQNGQAVSYFRQTIALNID-RTEMYYWTNVDKNSEISSKLATELALAYKKNRNYDKAYLFYKELL 81 (208)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCHH-HHHHHHHHHSCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCC-ChHHHHHhhhcchhhhhHHHHHHHHHHHHHCCCHHHHHHHHHHHH
Confidence 3567788999999999999999999999999999 8999998 9999999999999999999999
Q ss_pred hcCCCchHHHHHHHHHHHhCCChHHHHHHHHHHHhchhhc
Q 014478 382 VVSPDWPTALYLQAACLFSLGMENDARETLKDGTNLEAKK 421 (424)
Q Consensus 382 ~~~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~ 421 (424)
+++|+++.+++++|.++..+|++++|+..|+++++++|++
T Consensus 82 ~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~P~~ 121 (208)
T 3urz_A 82 QKAPNNVDCLEACAEMQVCRGQEKDALRMYEKILQLEADN 121 (208)
T ss_dssp HHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTC
T ss_pred HHCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCC
Confidence 9999999999999999999999999999999999999975
|
| >2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1 | Back alignment and structure |
|---|
Probab=99.59 E-value=1.6e-14 Score=124.54 Aligned_cols=106 Identities=19% Similarity=0.261 Sum_probs=100.2
Q ss_pred hHHHHHHHHHHHhHHHhhCCHHHHHHHHHHHhcCCCCCCH----------------HHHHHHHHHHHhcCChHHHHHHHH
Q 014478 315 QMQETLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSP----------------TVYARRCLSYLMNDMPQEALGDAM 378 (424)
Q Consensus 315 ~~~~~~~~~~~g~~~~~~g~~~~A~~~~~~ai~~~p~~~~----------------~~~~~~~~~~~~~~~~~~A~~~~~ 378 (424)
....+..+...|..++..|+|++|++.|.+++++.|. +. .++.++|.+|..+|++++|+..++
T Consensus 34 ~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~-~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~ 112 (198)
T 2fbn_A 34 KVQSAFDIKEEGNEFFKKNEINEAIVKYKEALDFFIH-TEEWDDQILLDKKKNIEISCNLNLATCYNKNKDYPKAIDHAS 112 (198)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTTT-CTTCCCHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhc-ccccchhhHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHH
Confidence 4456778889999999999999999999999999998 65 899999999999999999999999
Q ss_pred HHHhcCCCchHHHHHHHHHHHhCCChHHHHHHHHHHHhchhhc
Q 014478 379 QAQVVSPDWPTALYLQAACLFSLGMENDARETLKDGTNLEAKK 421 (424)
Q Consensus 379 ~al~~~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~ 421 (424)
++++++|+++.+++++|.+|..+|++++|+..|+++++++|.+
T Consensus 113 ~al~~~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~ 155 (198)
T 2fbn_A 113 KVLKIDKNNVKALYKLGVANMYFGFLEEAKENLYKAASLNPNN 155 (198)
T ss_dssp HHHHHSTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTC
T ss_pred HHHHhCcccHHHHHHHHHHHHHcccHHHHHHHHHHHHHHCCCc
Confidence 9999999999999999999999999999999999999999864
|
| >4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A* | Back alignment and structure |
|---|
Probab=99.58 E-value=9.2e-15 Score=149.95 Aligned_cols=103 Identities=14% Similarity=0.034 Sum_probs=91.6
Q ss_pred HHHHHHHHHhHHHhhCCHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhcCCCchHHHHHHHHH
Q 014478 318 ETLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAAC 397 (424)
Q Consensus 318 ~~~~~~~~g~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~ 397 (424)
.+..+...|..+.+.|++++|++.|++||+++|+ +..+|+++|.+|.++|++++|++.|++|++++|+++.+|+++|.+
T Consensus 42 ~~~a~~nLg~~l~~~g~~~eA~~~~~~Al~l~P~-~~~a~~nLg~~l~~~g~~~~A~~~~~kAl~l~P~~~~a~~~Lg~~ 120 (723)
T 4gyw_A 42 FAAAHSNLASVLQQQGKLQEALMHYKEAIRISPT-FADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAFADAHSNLASI 120 (723)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Confidence 4556778899999999999999999999999998 889999999999999999999999999999999999999999999
Q ss_pred HHhCCChHHHHHHHHHHHhchhhc
Q 014478 398 LFSLGMENDARETLKDGTNLEAKK 421 (424)
Q Consensus 398 ~~~~~~~~~A~~~~~~al~l~~~~ 421 (424)
|..+|++++|+++|++|++++|+.
T Consensus 121 ~~~~g~~~eAi~~~~~Al~l~P~~ 144 (723)
T 4gyw_A 121 HKDSGNIPEAIASYRTALKLKPDF 144 (723)
T ss_dssp HHHTTCHHHHHHHHHHHHHHCSCC
T ss_pred HHHcCCHHHHHHHHHHHHHhCCCC
Confidence 999999999999999999998864
|
| >1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1 | Back alignment and structure |
|---|
Probab=99.58 E-value=2.4e-14 Score=111.46 Aligned_cols=103 Identities=24% Similarity=0.390 Sum_probs=98.7
Q ss_pred HHHHHHHHHhHHHhhCCHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhcCCCchHHHHHHHHH
Q 014478 318 ETLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAAC 397 (424)
Q Consensus 318 ~~~~~~~~g~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~ 397 (424)
.+..+...|..++..|++++|++.|+++++.+|. +..++.++|.++..+|++++|+..++++++++|+++.+++++|.+
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~ 81 (118)
T 1elw_A 3 QVNELKEKGNKALSVGNIDDALQCYSEAIKLDPH-NHVLYSNRSAAYAKKGDYQKAYEDGCKTVDLKPDWGKGYSRKAAA 81 (118)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHcccHHHHHHHHHHHHHHCCC-cHHHHHHHHHHHHhhccHHHHHHHHHHHHHhCcccHHHHHHHHHH
Confidence 3567788999999999999999999999999999 999999999999999999999999999999999999999999999
Q ss_pred HHhCCChHHHHHHHHHHHhchhhc
Q 014478 398 LFSLGMENDARETLKDGTNLEAKK 421 (424)
Q Consensus 398 ~~~~~~~~~A~~~~~~al~l~~~~ 421 (424)
+..+|++++|+..|+++++++|.+
T Consensus 82 ~~~~~~~~~A~~~~~~~~~~~~~~ 105 (118)
T 1elw_A 82 LEFLNRFEEAKRTYEEGLKHEANN 105 (118)
T ss_dssp HHHTTCHHHHHHHHHHHHTTCTTC
T ss_pred HHHHhhHHHHHHHHHHHHHcCCCC
Confidence 999999999999999999999864
|
| >2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.58 E-value=2.8e-14 Score=113.80 Aligned_cols=103 Identities=21% Similarity=0.278 Sum_probs=98.8
Q ss_pred HHHHHHHHHhHHHhhCCHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhcCCCchHHHHHHHHH
Q 014478 318 ETLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAAC 397 (424)
Q Consensus 318 ~~~~~~~~g~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~ 397 (424)
....+...|..++..|++++|++.|+++++.+|. +..++.++|.+|..+|++++|+..++++++++|+++.+++++|.+
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~-~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~ 93 (133)
T 2lni_A 15 LALMVKNKGNECFQKGDYPQAMKHYTEAIKRNPK-DAKLYSNRAACYTKLLEFQLALKDCEECIQLEPTFIKGYTRKAAA 93 (133)
T ss_dssp HHHHHHHHHHHHHHTTCSHHHHHHHHHHHTTCTT-CHHHHHHHHHHHTTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCC-cHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCchHHHHHHHHH
Confidence 3567788999999999999999999999999999 999999999999999999999999999999999999999999999
Q ss_pred HHhCCChHHHHHHHHHHHhchhhc
Q 014478 398 LFSLGMENDARETLKDGTNLEAKK 421 (424)
Q Consensus 398 ~~~~~~~~~A~~~~~~al~l~~~~ 421 (424)
+..+|++++|+..|+++++++|.+
T Consensus 94 ~~~~~~~~~A~~~~~~~~~~~p~~ 117 (133)
T 2lni_A 94 LEAMKDYTKAMDVYQKALDLDSSC 117 (133)
T ss_dssp HHHTTCHHHHHHHHHHHHHHCGGG
T ss_pred HHHHhhHHHHHHHHHHHHHhCCCc
Confidence 999999999999999999999875
|
| >1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A | Back alignment and structure |
|---|
Probab=99.58 E-value=1.5e-14 Score=135.74 Aligned_cols=106 Identities=11% Similarity=0.105 Sum_probs=100.6
Q ss_pred hHHHHHHHHHHHhHHHhhCCHHHHHHHHHHHhcCCCCCC---------------HHHHHHHHHHHHhcCChHHHHHHHHH
Q 014478 315 QMQETLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVS---------------PTVYARRCLSYLMNDMPQEALGDAMQ 379 (424)
Q Consensus 315 ~~~~~~~~~~~g~~~~~~g~~~~A~~~~~~ai~~~p~~~---------------~~~~~~~~~~~~~~~~~~~A~~~~~~ 379 (424)
....+..+...|+.+++.|+|++|++.|++|++++|. + ..+|+++|.||.++|++++|+..|++
T Consensus 143 ~p~~a~~~~~~g~~~~~~g~~~~A~~~y~~Al~~~p~-~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~~~ 221 (336)
T 1p5q_A 143 KLEQSTIVKERGTVYFKEGKYKQALLQYKKIVSWLEY-ESSFSNEEAQKAQALRLASHLNLAMCHLKLQAFSAAIESCNK 221 (336)
T ss_dssp HHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHTTT-CCCCCSHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHhhc-cccCChHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHH
Confidence 3456778889999999999999999999999999999 6 69999999999999999999999999
Q ss_pred HHhcCCCchHHHHHHHHHHHhCCChHHHHHHHHHHHhchhhc
Q 014478 380 AQVVSPDWPTALYLQAACLFSLGMENDARETLKDGTNLEAKK 421 (424)
Q Consensus 380 al~~~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~ 421 (424)
|++++|+++.+|+++|.+|..+|++++|+.+|++|++++|.+
T Consensus 222 al~~~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~ 263 (336)
T 1p5q_A 222 ALELDSNNEKGLSRRGEAHLAVNDFELARADFQKVLQLYPNN 263 (336)
T ss_dssp HHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSSC
T ss_pred HHHhCCCcHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCC
Confidence 999999999999999999999999999999999999999974
|
| >4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A | Back alignment and structure |
|---|
Probab=99.57 E-value=1.6e-15 Score=142.53 Aligned_cols=128 Identities=11% Similarity=0.084 Sum_probs=90.6
Q ss_pred CCCcccceeee-ecceecccccCCCch---------------hh--------hHHHHHHHHHhcCCCcCcceeEEEEEeC
Q 014478 2 GGRCSKFSICW-FHCHLKSSVLESSDL---------------GE--------TLNLEEAKAVGNLRSERLANLIGCCYEA 57 (424)
Q Consensus 2 G~~g~v~~~~~-~~~~v~~~~~~~~~~---------------~~--------~~~~~E~~~l~~l~h~~iv~~~~~~~~~ 57 (424)
|++|.||.+.. .+..||+|++..... .. -...+|...|.++.+.++....-+...
T Consensus 106 Gk~a~VY~a~d~~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL~~~gv~vp~p~~~~- 184 (397)
T 4gyi_A 106 GKESDIMIVADEKGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKALYEEGFPVPEPIAQS- 184 (397)
T ss_dssp CSSEEEEEEECTTCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHHHHTTCSCCCEEEEE-
T ss_pred CCceEEEEEECCCCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHHhcCCCCCeeeecc-
Confidence 89999999986 677888887642210 00 112356777777754443222212222
Q ss_pred CeeeEEEecCCCCCHHhHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCC----------e
Q 014478 58 DERLLVAEFMPNETLAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGN----------P 127 (424)
Q Consensus 58 ~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~----------~ 127 (424)
..+|||||++|++|.++.. . .....++.|++.+|.+||+.| ||||||||.|||++++|. +
T Consensus 185 -~~~LVME~i~G~~L~~l~~------~--~~~~~l~~qll~~l~~lH~~g-IVHrDLKp~NILl~~dgd~~d~~~~~~~~ 254 (397)
T 4gyi_A 185 -RHTIVMSLVDALPMRQVSS------V--PDPASLYADLIALILRLAKHG-LIHGDFNEFNILIREEKDAEDPSSITLTP 254 (397)
T ss_dssp -TTEEEEECCSCEEGGGCCC------C--SCHHHHHHHHHHHHHHHHHTT-EECSCCSTTSEEEEEEECSSCTTSEEEEE
T ss_pred -CceEEEEecCCccHhhhcc------c--HHHHHHHHHHHHHHHHHHHCC-CcCCCCCHHHEEEeCCCCcccccccccce
Confidence 2379999999999876542 1 234578899999999999999 999999999999987763 8
Q ss_pred EEccccccccCCC
Q 014478 128 RLSSFGLMKNSRD 140 (424)
Q Consensus 128 kl~Dfg~~~~~~~ 140 (424)
.|+||+.+....+
T Consensus 255 ~iID~~Q~V~~~h 267 (397)
T 4gyi_A 255 IIIXFPQMVSMDH 267 (397)
T ss_dssp EECCCTTCEETTS
T ss_pred EEEEeCCcccCCC
Confidence 9999998776543
|
| >4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A* | Back alignment and structure |
|---|
Probab=99.57 E-value=1.7e-15 Score=124.80 Aligned_cols=96 Identities=11% Similarity=-0.083 Sum_probs=89.7
Q ss_pred HHhHHHhhCCHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhcCCCchHHHHHHHHHHHhCCCh
Q 014478 325 HGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAACLFSLGME 404 (424)
Q Consensus 325 ~g~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~~~~~ 404 (424)
.|..+..+|++++|++.|.+++..+|+ +...++++|.+|.++|+|++|++.|+++++++|+++.+|+++|.+|..+|++
T Consensus 3 LG~~~~~~~~~e~ai~~~~~a~~~~p~-~~~~~~~la~~y~~~~~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~~~~ 81 (150)
T 4ga2_A 3 LGSMRRSKADVERYIASVQGSTPSPRQ-KSIKGFYFAKLYYEAKEYDLAKKYICTYINVQERDPKAHRFLGLLYELEENT 81 (150)
T ss_dssp ----CCCHHHHHHHHHHHHHHSCSHHH-HHTTHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCH
T ss_pred hHHHHHHcChHHHHHHHHHHhcccCcc-cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCch
Confidence 467788899999999999999999999 9999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhchhhc
Q 014478 405 NDARETLKDGTNLEAKK 421 (424)
Q Consensus 405 ~~A~~~~~~al~l~~~~ 421 (424)
++|+.+|+++++++|++
T Consensus 82 ~~A~~~~~~al~~~p~~ 98 (150)
T 4ga2_A 82 DKAVECYRRSVELNPTQ 98 (150)
T ss_dssp HHHHHHHHHHHHHCTTC
T ss_pred HHHHHHHHHHHHhCCCC
Confidence 99999999999999974
|
| >1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A | Back alignment and structure |
|---|
Probab=99.57 E-value=1.4e-14 Score=141.71 Aligned_cols=107 Identities=12% Similarity=0.177 Sum_probs=98.6
Q ss_pred hHHHHHHHHHHHhHHHhhCCHHHHHHHHHHHhcCCCCCC---------------HHHHHHHHHHHHhcCChHHHHHHHHH
Q 014478 315 QMQETLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVS---------------PTVYARRCLSYLMNDMPQEALGDAMQ 379 (424)
Q Consensus 315 ~~~~~~~~~~~g~~~~~~g~~~~A~~~~~~ai~~~p~~~---------------~~~~~~~~~~~~~~~~~~~A~~~~~~ 379 (424)
....+..++..|+.+++.|+|++|+..|++|++++|. + ..+|+|+|.||.++|+|++|+.+|++
T Consensus 264 ~~~~a~~~~~~G~~~~~~g~~~~A~~~y~~Al~~~p~-~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~~~ 342 (457)
T 1kt0_A 264 KLEQAAIVKEKGTVYFKGGKYMQAVIQYGKIVSWLEM-EYGLSEKESKASESFLLAAFLNLAMCYLKLREYTKAVECCDK 342 (457)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTT-CCSCCHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhcc-cccCChHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHH
Confidence 3456778889999999999999999999999999998 6 69999999999999999999999999
Q ss_pred HHhcCCCchHHHHHHHHHHHhCCChHHHHHHHHHHHhchhhcC
Q 014478 380 AQVVSPDWPTALYLQAACLFSLGMENDARETLKDGTNLEAKKN 422 (424)
Q Consensus 380 al~~~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~~ 422 (424)
||+++|+++++|+++|.+|..+|+|++|+.+|++|++++|.+.
T Consensus 343 al~~~p~~~~a~~~~g~a~~~~g~~~~A~~~~~~al~l~P~~~ 385 (457)
T 1kt0_A 343 ALGLDSANEKGLYRRGEAQLLMNEFESAKGDFEKVLEVNPQNK 385 (457)
T ss_dssp HHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTC----
T ss_pred HHhcCCccHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCH
Confidence 9999999999999999999999999999999999999999754
|
| >2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2 | Back alignment and structure |
|---|
Probab=99.57 E-value=1.9e-14 Score=131.55 Aligned_cols=102 Identities=22% Similarity=0.411 Sum_probs=98.9
Q ss_pred HHHHHHHHhHHHhhCCHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhcCCCchHHHHHHHHHH
Q 014478 319 TLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAACL 398 (424)
Q Consensus 319 ~~~~~~~g~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~ 398 (424)
+..+...|..++..|+|++|++.|+++++.+|+ +..+++++|.+|.++|++++|+..+++|++++|+++.+++++|.+|
T Consensus 4 a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~ 82 (281)
T 2c2l_A 4 AQELKEQGNRLFVGRKYPEAAACYGRAITRNPL-VAVYYTNRALCYLKMQQPEQALADCRRALELDGQSVKAHFFLGQCQ 82 (281)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSC-CHHHHHHHHHHHHHTTCHHHHHHHHHHHTTSCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCc-cHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Confidence 457788999999999999999999999999999 9999999999999999999999999999999999999999999999
Q ss_pred HhCCChHHHHHHHHHHHhchhhc
Q 014478 399 FSLGMENDARETLKDGTNLEAKK 421 (424)
Q Consensus 399 ~~~~~~~~A~~~~~~al~l~~~~ 421 (424)
..+|++++|+..|+++++++|.+
T Consensus 83 ~~~g~~~~A~~~~~~al~l~p~~ 105 (281)
T 2c2l_A 83 LEMESYDEAIANLQRAYSLAKEQ 105 (281)
T ss_dssp HHTTCHHHHHHHHHHHHHHHHHT
T ss_pred HHcCCHHHHHHHHHHHHHhCccc
Confidence 99999999999999999999975
|
| >3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A | Back alignment and structure |
|---|
Probab=99.56 E-value=3.6e-14 Score=120.59 Aligned_cols=102 Identities=19% Similarity=0.170 Sum_probs=97.4
Q ss_pred HHHHHHHHhHHHhhCCHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhcCCCchHHHHHHHHHH
Q 014478 319 TLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAACL 398 (424)
Q Consensus 319 ~~~~~~~g~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~ 398 (424)
...+...|..+...++++.|++.+.++++.+|. +..++..+|.+|.++|++++|+..|+++++++|+++.+|+++|.+|
T Consensus 73 ~~~~~~~~~~~~~~~~~~~a~~~~~~a~~~~~~-~~~~~~~lg~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~~~lg~~~ 151 (184)
T 3vtx_A 73 AEAYYILGSANFMIDEKQAAIDALQRAIALNTV-YADAYYKLGLVYDSMGEHDKAIEAYEKTISIKPGFIRAYQSIGLAY 151 (184)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcc-chHHHHHHHHHHHHhCCchhHHHHHHHHHHhcchhhhHHHHHHHHH
Confidence 345567788999999999999999999999999 9999999999999999999999999999999999999999999999
Q ss_pred HhCCChHHHHHHHHHHHhchhhc
Q 014478 399 FSLGMENDARETLKDGTNLEAKK 421 (424)
Q Consensus 399 ~~~~~~~~A~~~~~~al~l~~~~ 421 (424)
..+|++++|+.+|++|++++|++
T Consensus 152 ~~~g~~~~A~~~~~~al~~~p~~ 174 (184)
T 3vtx_A 152 EGKGLRDEAVKYFKKALEKEEKK 174 (184)
T ss_dssp HHTTCHHHHHHHHHHHHHTTHHH
T ss_pred HHCCCHHHHHHHHHHHHhCCccC
Confidence 99999999999999999999975
|
| >2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.55 E-value=4.9e-14 Score=114.73 Aligned_cols=102 Identities=24% Similarity=0.241 Sum_probs=97.5
Q ss_pred HHHHHHHHhHHHhhCCHHHHHHHHHHHhcCCCCCC---HHHHHHHHHHHHhcCChHHHHHHHHHHHhcCCCchHHHHHHH
Q 014478 319 TLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVS---PTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQA 395 (424)
Q Consensus 319 ~~~~~~~g~~~~~~g~~~~A~~~~~~ai~~~p~~~---~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g 395 (424)
+..+...|..++..|+|++|++.|+++++.+|+ + ..++.++|.+|..+|++++|+..++++++++|+++.+++++|
T Consensus 28 ~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~-~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a 106 (148)
T 2dba_A 28 VEQLRKEGNELFKCGDYGGALAAYTQALGLDAT-PQDQAVLHRNRAACHLKLEDYDKAETEASKAIEKDGGDVKALYRRS 106 (148)
T ss_dssp HHHHHHHHHHHHTTTCHHHHHHHHHHHHTSCCC-HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTSCCHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHHHccc-chHHHHHHHHHHHHHHHHccHHHHHHHHHHHHhhCccCHHHHHHHH
Confidence 556778999999999999999999999999998 7 899999999999999999999999999999999999999999
Q ss_pred HHHHhCCChHHHHHHHHHHHhchhhc
Q 014478 396 ACLFSLGMENDARETLKDGTNLEAKK 421 (424)
Q Consensus 396 ~~~~~~~~~~~A~~~~~~al~l~~~~ 421 (424)
.++..+|++++|+..|+++++++|.+
T Consensus 107 ~~~~~~~~~~~A~~~~~~al~~~p~~ 132 (148)
T 2dba_A 107 QALEKLGRLDQAVLDLQRCVSLEPKN 132 (148)
T ss_dssp HHHHHHTCHHHHHHHHHHHHHHCSSC
T ss_pred HHHHHcCCHHHHHHHHHHHHHcCCCc
Confidence 99999999999999999999999864
|
| >2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=99.55 E-value=2.1e-14 Score=125.87 Aligned_cols=102 Identities=14% Similarity=0.211 Sum_probs=98.2
Q ss_pred HHHHHHHHhHHHhhCCHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhcCCCchHHHHHHHHHH
Q 014478 319 TLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAACL 398 (424)
Q Consensus 319 ~~~~~~~g~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~ 398 (424)
+..+...|..+++.|++++|+..|+++++.+|+ +..+++++|.++..+|++++|+..++++++++|+++.+++++|.++
T Consensus 5 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~-~~~a~~~lg~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~ 83 (217)
T 2pl2_A 5 EQNPLRLGVQLYALGRYDAALTLFERALKENPQ-DPEALYWLARTQLKLGLVNPALENGKTLVARTPRYLGGYMVLSEAY 83 (217)
T ss_dssp CHHHHHHHHHHHHTTCHHHHHHHHHHHHTTSSS-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHH
Confidence 446778899999999999999999999999999 9999999999999999999999999999999999999999999999
Q ss_pred HhC-----------CChHHHHHHHHHHHhchhhc
Q 014478 399 FSL-----------GMENDARETLKDGTNLEAKK 421 (424)
Q Consensus 399 ~~~-----------~~~~~A~~~~~~al~l~~~~ 421 (424)
..+ |++++|+..|+++++++|+.
T Consensus 84 ~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~P~~ 117 (217)
T 2pl2_A 84 VALYRQAEDRERGKGYLEQALSVLKDAERVNPRY 117 (217)
T ss_dssp HHHHHTCSSHHHHHHHHHHHHHHHHHHHHHCTTC
T ss_pred HHhhhhhhhhcccccCHHHHHHHHHHHHHhCccc
Confidence 999 99999999999999999974
|
| >1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A | Back alignment and structure |
|---|
Probab=99.55 E-value=8.3e-14 Score=115.69 Aligned_cols=105 Identities=26% Similarity=0.374 Sum_probs=100.2
Q ss_pred HHHHHHHHHHHhHHHhhCCHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhcCCCchHHHHHHH
Q 014478 316 MQETLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQA 395 (424)
Q Consensus 316 ~~~~~~~~~~g~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g 395 (424)
...+..+...|..++..|++++|+..|.++++.+|. +..++.++|.++..+|++++|+..++++++++|+++.+++++|
T Consensus 10 ~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~~~-~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~a 88 (166)
T 1a17_A 10 LKRAEELKTQANDYFKAKDYENAIKFYSQAIELNPS-NAIYYGNRSLAYLRTECYGYALGDATRAIELDKKYIKGYYRRA 88 (166)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCC-ChHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcccHHHHHHHH
Confidence 456778889999999999999999999999999999 9999999999999999999999999999999999999999999
Q ss_pred HHHHhCCChHHHHHHHHHHHhchhhc
Q 014478 396 ACLFSLGMENDARETLKDGTNLEAKK 421 (424)
Q Consensus 396 ~~~~~~~~~~~A~~~~~~al~l~~~~ 421 (424)
.++..+|++++|+..|+++++++|.+
T Consensus 89 ~~~~~~~~~~~A~~~~~~a~~~~p~~ 114 (166)
T 1a17_A 89 ASNMALGKFRAALRDYETVVKVKPHD 114 (166)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHSTTC
T ss_pred HHHHHhccHHHHHHHHHHHHHhCCCC
Confidence 99999999999999999999999864
|
| >1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A | Back alignment and structure |
|---|
Probab=99.54 E-value=2.4e-14 Score=135.99 Aligned_cols=108 Identities=19% Similarity=0.210 Sum_probs=101.3
Q ss_pred hHhHHHHHHHHHHHhHHHhhCCHHHHHHHHHHHhc----------------CCCCCCHHHHHHHHHHHHhcCChHHHHHH
Q 014478 313 TSQMQETLNSKKHGDTAFRAKDFSTAIDCYTQFID----------------GGTMVSPTVYARRCLSYLMNDMPQEALGD 376 (424)
Q Consensus 313 ~~~~~~~~~~~~~g~~~~~~g~~~~A~~~~~~ai~----------------~~p~~~~~~~~~~~~~~~~~~~~~~A~~~ 376 (424)
......+..++..|+.+++.|+|++|++.|++|++ .+|. ...+|+++|.+|.++|++++|+..
T Consensus 217 ~~~~~~a~~~~~~g~~~~~~g~~~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~~~-~~~~~~nla~~~~~~g~~~~A~~~ 295 (370)
T 1ihg_A 217 DKILLISEDLKNIGNTFFKSQNWEMAIKKYTKVLRYVEGSRAAAEDADGAKLQPV-ALSCVLNIGACKLKMSDWQGAVDS 295 (370)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHSCHHHHGGGHHH-HHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhhcCccccChHHHHHHHHH-HHHHHHHHHHHHHhccCHHHHHHH
Confidence 34455677889999999999999999999999998 7787 889999999999999999999999
Q ss_pred HHHHHhcCCCchHHHHHHHHHHHhCCChHHHHHHHHHHHhchhhc
Q 014478 377 AMQAQVVSPDWPTALYLQAACLFSLGMENDARETLKDGTNLEAKK 421 (424)
Q Consensus 377 ~~~al~~~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~ 421 (424)
|++|++++|+++++|+++|.+|..+|++++|+.+|++|++++|.+
T Consensus 296 ~~~al~~~p~~~~a~~~lg~~~~~~g~~~eA~~~l~~Al~l~P~~ 340 (370)
T 1ihg_A 296 CLEALEIDPSNTKALYRRAQGWQGLKEYDQALADLKKAQEIAPED 340 (370)
T ss_dssp HHHHHTTCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC
T ss_pred HHHHHHhCchhHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCC
Confidence 999999999999999999999999999999999999999999964
|
| >2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris} | Back alignment and structure |
|---|
Probab=99.54 E-value=6.3e-14 Score=111.50 Aligned_cols=100 Identities=13% Similarity=0.063 Sum_probs=94.8
Q ss_pred HHHHHHhHHHhhCCHHHHHHHHHHHhcCCCCCCH---HHHHHHHHHHHhcCChHHHHHHHHHHHhcCCCc---hHHHHHH
Q 014478 321 NSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSP---TVYARRCLSYLMNDMPQEALGDAMQAQVVSPDW---PTALYLQ 394 (424)
Q Consensus 321 ~~~~~g~~~~~~g~~~~A~~~~~~ai~~~p~~~~---~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~---~~a~~~~ 394 (424)
.+...|..++..|+|++|++.|.++++.+|+ +. .+++++|.+|..+|++++|+..++++++.+|++ +.+++++
T Consensus 4 ~~~~~a~~~~~~~~~~~A~~~~~~~~~~~p~-~~~~~~~~~~lg~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~~~~l 82 (129)
T 2xev_A 4 TAYNVAFDALKNGKYDDASQLFLSFLELYPN-GVYTPNALYWLGESYYATRNFQLAEAQFRDLVSRYPTHDKAAGGLLKL 82 (129)
T ss_dssp CHHHHHHHHHHTTCHHHHHHHHHHHHHHCSS-STTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTSTTHHHHHHHH
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHHHCCC-CcccHHHHHHHHHHHHHhccHHHHHHHHHHHHHHCCCCcccHHHHHHH
Confidence 4567899999999999999999999999998 76 799999999999999999999999999999999 8999999
Q ss_pred HHHHHhCCChHHHHHHHHHHHhchhhc
Q 014478 395 AACLFSLGMENDARETLKDGTNLEAKK 421 (424)
Q Consensus 395 g~~~~~~~~~~~A~~~~~~al~l~~~~ 421 (424)
|.++..+|++++|+..|+++++.+|+.
T Consensus 83 a~~~~~~g~~~~A~~~~~~~~~~~p~~ 109 (129)
T 2xev_A 83 GLSQYGEGKNTEAQQTLQQVATQYPGS 109 (129)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHSTTS
T ss_pred HHHHHHcCCHHHHHHHHHHHHHHCCCC
Confidence 999999999999999999999999864
|
| >4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A* | Back alignment and structure |
|---|
Probab=99.54 E-value=3.4e-14 Score=145.73 Aligned_cols=103 Identities=21% Similarity=0.180 Sum_probs=89.6
Q ss_pred HHHHHHHHHHhHHHhhCCHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhcCCCchHHHHHHHH
Q 014478 317 QETLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAA 396 (424)
Q Consensus 317 ~~~~~~~~~g~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~ 396 (424)
..+..+...|..+.+.|++++|++.|++|++++|+ +..+|+++|.+|.++|++++|+..|++|++++|+++.+++++|.
T Consensus 75 ~~~~a~~nLg~~l~~~g~~~~A~~~~~kAl~l~P~-~~~a~~~Lg~~~~~~g~~~eAi~~~~~Al~l~P~~~~a~~~L~~ 153 (723)
T 4gyw_A 75 TFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPA-FADAHSNLASIHKDSGNIPEAIASYRTALKLKPDFPDAYCNLAH 153 (723)
T ss_dssp TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSCCHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHHhhhhh
Confidence 34557778888888888999999999999888888 88888888988888889999999999999999998888888999
Q ss_pred HHHhCCChHHHHHHHHHHHhchhh
Q 014478 397 CLFSLGMENDARETLKDGTNLEAK 420 (424)
Q Consensus 397 ~~~~~~~~~~A~~~~~~al~l~~~ 420 (424)
+|..+|++++|++.|++++++.|+
T Consensus 154 ~l~~~g~~~~A~~~~~kal~l~~~ 177 (723)
T 4gyw_A 154 CLQIVCDWTDYDERMKKLVSIVAD 177 (723)
T ss_dssp HHHHTTCCTTHHHHHHHHHHHHHH
T ss_pred HHHhcccHHHHHHHHHHHHHhChh
Confidence 888899999999998888888775
|
| >2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=99.53 E-value=2.3e-14 Score=134.55 Aligned_cols=107 Identities=15% Similarity=0.186 Sum_probs=95.9
Q ss_pred hHHHHHHHHHHHhHHHhhCCHHHHHHHHHHHhcCCCCCCH-----------------HHHHHHHHHHHhcCChHHHHHHH
Q 014478 315 QMQETLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSP-----------------TVYARRCLSYLMNDMPQEALGDA 377 (424)
Q Consensus 315 ~~~~~~~~~~~g~~~~~~g~~~~A~~~~~~ai~~~p~~~~-----------------~~~~~~~~~~~~~~~~~~A~~~~ 377 (424)
....+..++..|+.+++.|+|++|+..|.+|++++|+ +. .+|+++|.||.++|+|++|+..|
T Consensus 175 ~~~~a~~~~~~g~~~~~~g~~~~A~~~y~~Al~~~p~-~~~~~~~~~~~~~~~~l~~~~~~nla~~~~~~g~~~~A~~~~ 253 (338)
T 2if4_A 175 RIGAADRRKMDGNSLFKEEKLEEAMQQYEMAIAYMGD-DFMFQLYGKYQDMALAVKNPCHLNIAACLIKLKRYDEAIGHC 253 (338)
T ss_dssp HHHHHHHHHHHHHHTCSSSCCHHHHHHHHHHHHHSCH-HHHHTCCHHHHHHHHHHHTHHHHHHHHHHHTTTCCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhcc-chhhhhcccHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHH
Confidence 4456778899999999999999999999999999998 65 48999999999999999999999
Q ss_pred HHHHhcCCCchHHHHHHHHHHHhCCChHHHHHHHHHHHhchhhcC
Q 014478 378 MQAQVVSPDWPTALYLQAACLFSLGMENDARETLKDGTNLEAKKN 422 (424)
Q Consensus 378 ~~al~~~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~~ 422 (424)
++|++++|++.++|+++|.+|..+|+|++|+.+|++|++++|.+.
T Consensus 254 ~~al~~~p~~~~a~~~lg~a~~~~g~~~~A~~~l~~al~l~p~~~ 298 (338)
T 2if4_A 254 NIVLTEEEKNPKALFRRGKAKAELGQMDSARDDFRKAQKYAPDDK 298 (338)
T ss_dssp HHHHHHCTTCHHHHHHHHHHHHTTTCHHHHHHHHHHTTC------
T ss_pred HHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCCCCH
Confidence 999999999999999999999999999999999999999999753
|
| >2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis} | Back alignment and structure |
|---|
Probab=99.53 E-value=6.6e-14 Score=107.90 Aligned_cols=101 Identities=14% Similarity=0.054 Sum_probs=96.4
Q ss_pred HHHHHHHhHHHhhCCHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhcCCC--chHHHHHHHHH
Q 014478 320 LNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPD--WPTALYLQAAC 397 (424)
Q Consensus 320 ~~~~~~g~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~--~~~a~~~~g~~ 397 (424)
..+...|..++..|++++|+..|+++++.+|. +..++.++|.++..+|++++|+..++++++++|+ +..+++++|.+
T Consensus 7 ~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~-~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~l~~~ 85 (112)
T 2kck_A 7 EEYYLEGVLQYDAGNYTESIDLFEKAIQLDPE-ESKYWLMKGKALYNLERYEEAVDCYNYVINVIEDEYNKDVWAAKADA 85 (112)
T ss_dssp TGGGGHHHHHHSSCCHHHHHHHHHHHHHHCCC-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTSCCTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhhHHHHHHHHHHHHHhCcC-CHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCcccchHHHHHHHHHH
Confidence 34567899999999999999999999999999 9999999999999999999999999999999999 99999999999
Q ss_pred HHhC-CChHHHHHHHHHHHhchhhc
Q 014478 398 LFSL-GMENDARETLKDGTNLEAKK 421 (424)
Q Consensus 398 ~~~~-~~~~~A~~~~~~al~l~~~~ 421 (424)
+..+ |++++|+++++++++.+|..
T Consensus 86 ~~~~~~~~~~A~~~~~~~~~~~p~~ 110 (112)
T 2kck_A 86 LRYIEGKEVEAEIAEARAKLEHHHH 110 (112)
T ss_dssp HTTCSSCSHHHHHHHHHHGGGCCCC
T ss_pred HHHHhCCHHHHHHHHHHHhhcccCC
Confidence 9999 99999999999999999865
|
| >2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1 | Back alignment and structure |
|---|
Probab=99.53 E-value=1.8e-13 Score=108.43 Aligned_cols=104 Identities=19% Similarity=0.269 Sum_probs=99.5
Q ss_pred HHHHHHHHHHhHHHhhCCHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhcCCCchHHHHHHHH
Q 014478 317 QETLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAA 396 (424)
Q Consensus 317 ~~~~~~~~~g~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~ 396 (424)
..+..+...|..++..|++++|++.|.++++.+|+ +..++.++|.++..+|++++|+..+++++.++|+++.+++.+|.
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~ 88 (131)
T 2vyi_A 10 AEAERLKTEGNEQMKVENFEAAVHFYGKAIELNPA-NAVYFCNRAAAYSKLGNYAGAVQDCERAICIDPAYSKAYGRMGL 88 (131)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred hhhHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCC-CHHHHHHHHHHHHHhhchHHHHHHHHHHHhcCccCHHHHHHHHH
Confidence 45667888999999999999999999999999999 99999999999999999999999999999999999999999999
Q ss_pred HHHhCCChHHHHHHHHHHHhchhhc
Q 014478 397 CLFSLGMENDARETLKDGTNLEAKK 421 (424)
Q Consensus 397 ~~~~~~~~~~A~~~~~~al~l~~~~ 421 (424)
++..+|++++|+..|+++++++|.+
T Consensus 89 ~~~~~~~~~~A~~~~~~~~~~~p~~ 113 (131)
T 2vyi_A 89 ALSSLNKHVEAVAYYKKALELDPDN 113 (131)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHSTTC
T ss_pred HHHHhCCHHHHHHHHHHHHhcCccc
Confidence 9999999999999999999999864
|
| >3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans} | Back alignment and structure |
|---|
Probab=99.53 E-value=8.6e-15 Score=114.97 Aligned_cols=90 Identities=14% Similarity=0.057 Sum_probs=82.3
Q ss_pred hhCCHHHHHHHHHHHhcC---CCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhcCCCchHHHHHHHHHHHhCCChHHH
Q 014478 331 RAKDFSTAIDCYTQFIDG---GTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAACLFSLGMENDA 407 (424)
Q Consensus 331 ~~g~~~~A~~~~~~ai~~---~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~~~~~~~A 407 (424)
..|++++|+..|++++++ +|+ +..++.++|.+|..+|++++|+..++++++++|+++.+++++|.++..+|++++|
T Consensus 2 ~~g~~~~A~~~~~~al~~~~~~p~-~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A 80 (117)
T 3k9i_A 2 VLGLEAQAVPYYEKAIASGLQGKD-LAECYLGLGSTFRTLGEYRKAEAVLANGVKQFPNHQALRVFYAMVLYNLGRYEQG 80 (117)
T ss_dssp -----CCCHHHHHHHHSSCCCHHH-HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHH
T ss_pred CCCcHHHHHHHHHHHHHcCCCCcc-HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHcCCHHHH
Confidence 468999999999999999 688 8999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhchhhc
Q 014478 408 RETLKDGTNLEAKK 421 (424)
Q Consensus 408 ~~~~~~al~l~~~~ 421 (424)
+..|+++++++|.+
T Consensus 81 ~~~~~~al~~~p~~ 94 (117)
T 3k9i_A 81 VELLLKIIAETSDD 94 (117)
T ss_dssp HHHHHHHHHHHCCC
T ss_pred HHHHHHHHHhCCCc
Confidence 99999999998864
|
| >4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis} | Back alignment and structure |
|---|
Probab=99.52 E-value=8.4e-14 Score=122.68 Aligned_cols=102 Identities=15% Similarity=0.099 Sum_probs=98.0
Q ss_pred HHHHHHHHhHHHhhCCHHHHHHHHHHHhcCCC-CCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhcCCCchHHHHHHHHH
Q 014478 319 TLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGT-MVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAAC 397 (424)
Q Consensus 319 ~~~~~~~g~~~~~~g~~~~A~~~~~~ai~~~p-~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~ 397 (424)
...+...|..++..|+|++|++.|+++++.+| . +..+++++|.++..+|++++|+..++++++++|++..+++++|.+
T Consensus 7 ~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~-~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~ 85 (228)
T 4i17_A 7 PNQLKNEGNDALNAKNYAVAFEKYSEYLKLTNNQ-DSVTAYNCGVCADNIKKYKEAADYFDIAIKKNYNLANAYIGKSAA 85 (228)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTTTC-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCSHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHhccCCC-CcHHHHHHHHHHHHhhcHHHHHHHHHHHHHhCcchHHHHHHHHHH
Confidence 46788999999999999999999999999999 6 889999999999999999999999999999999999999999999
Q ss_pred HHhCCChHHHHHHHHHHHhchhhc
Q 014478 398 LFSLGMENDARETLKDGTNLEAKK 421 (424)
Q Consensus 398 ~~~~~~~~~A~~~~~~al~l~~~~ 421 (424)
|..+|++++|+..|+++++++|++
T Consensus 86 ~~~~~~~~~A~~~~~~al~~~p~~ 109 (228)
T 4i17_A 86 YRDMKNNQEYIATLTEGIKAVPGN 109 (228)
T ss_dssp HHHTTCHHHHHHHHHHHHHHSTTC
T ss_pred HHHcccHHHHHHHHHHHHHHCCCc
Confidence 999999999999999999999974
|
| >2h6f_A Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit; ftase, farnesyltransferase, farnesyl transferase, prenyltransferase, CAAX, RAS, lipid modification, prenylation; HET: SUC FAR; 1.50A {Homo sapiens} SCOP: a.118.6.1 PDB: 1jcq_A* 1ld7_A* 1mzc_A* 1s63_A* 1sa4_A* 1tn6_A* 1ld8_A* 2h6g_A* 2h6h_A* 2h6i_A* 2iej_A* 3e37_A* 2f0y_A* 3ksl_A* 2zir_A* 2zis_A* 1o5m_A* 3ksq_A* 1o1t_A* 1o1s_A* ... | Back alignment and structure |
|---|
Probab=99.51 E-value=4.7e-14 Score=134.34 Aligned_cols=104 Identities=7% Similarity=-0.048 Sum_probs=84.9
Q ss_pred HHHHHHHHHHhHHHhhCC-HHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhcCCCchHHHHHHH
Q 014478 317 QETLNSKKHGDTAFRAKD-FSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQA 395 (424)
Q Consensus 317 ~~~~~~~~~g~~~~~~g~-~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g 395 (424)
.....+..+|..+...|+ +++|++.|+++|+++|+ +..+|+++|.+|..+|++++|+.+|++||+++|++..+|+++|
T Consensus 129 ~~~~a~~~~g~~l~~~g~d~~eAl~~~~~al~l~P~-~~~a~~~~g~~~~~~g~~~eAl~~~~kal~ldP~~~~a~~~lg 207 (382)
T 2h6f_A 129 ANYTVWHFRRVLLKSLQKDLHEEMNYITAIIEEQPK-NYQVWHHRRVLVEWLRDPSQELEFIADILNQDAKNYHAWQHRQ 207 (382)
T ss_dssp TCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHTCCTTHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHcccCHHHHHHHHHHHHHHCCC-CHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCccCHHHHHHHH
Confidence 345566777888888886 88888888888888888 8888888888888888888888888888888888888888888
Q ss_pred HHHHhCCChHHHHHHHHHHHhchhhc
Q 014478 396 ACLFSLGMENDARETLKDGTNLEAKK 421 (424)
Q Consensus 396 ~~~~~~~~~~~A~~~~~~al~l~~~~ 421 (424)
.++..+|++++|+.+|+++++++|.+
T Consensus 208 ~~~~~~g~~~eAl~~~~~al~l~P~~ 233 (382)
T 2h6f_A 208 WVIQEFKLWDNELQYVDQLLKEDVRN 233 (382)
T ss_dssp HHHHHHTCCTTHHHHHHHHHHHCTTC
T ss_pred HHHHHcCChHHHHHHHHHHHHhCCCC
Confidence 88888888888888888888888864
|
| >2h6f_A Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit; ftase, farnesyltransferase, farnesyl transferase, prenyltransferase, CAAX, RAS, lipid modification, prenylation; HET: SUC FAR; 1.50A {Homo sapiens} SCOP: a.118.6.1 PDB: 1jcq_A* 1ld7_A* 1mzc_A* 1s63_A* 1sa4_A* 1tn6_A* 1ld8_A* 2h6g_A* 2h6h_A* 2h6i_A* 2iej_A* 3e37_A* 2f0y_A* 3ksl_A* 2zir_A* 2zis_A* 1o5m_A* 3ksq_A* 1o1t_A* 1o1s_A* ... | Back alignment and structure |
|---|
Probab=99.51 E-value=3.3e-14 Score=135.35 Aligned_cols=102 Identities=8% Similarity=-0.052 Sum_probs=59.8
Q ss_pred HHHHHHHHhHHHhhCCHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhcCCCchHHHHHHHHHH
Q 014478 319 TLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAACL 398 (424)
Q Consensus 319 ~~~~~~~g~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~ 398 (424)
...+...|..+...|++++|+..|++||+++|+ +..+|+++|.++..+|++++|+..|+++|+++|++..+|+++|.++
T Consensus 166 ~~a~~~~g~~~~~~g~~~eAl~~~~kal~ldP~-~~~a~~~lg~~~~~~g~~~eAl~~~~~al~l~P~~~~a~~~lg~~l 244 (382)
T 2h6f_A 166 YQVWHHRRVLVEWLRDPSQELEFIADILNQDAK-NYHAWQHRQWVIQEFKLWDNELQYVDQLLKEDVRNNSVWNQRYFVI 244 (382)
T ss_dssp HHHHHHHHHHHHHHTCCTTHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHTCCTTHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHHhCcc-CHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Confidence 344555566666666666666666666666665 6666666666666666666666666666666666666666666666
Q ss_pred Hh-CCChHHH-----HHHHHHHHhchhhc
Q 014478 399 FS-LGMENDA-----RETLKDGTNLEAKK 421 (424)
Q Consensus 399 ~~-~~~~~~A-----~~~~~~al~l~~~~ 421 (424)
.. .|.+++| +.+|++|++++|.+
T Consensus 245 ~~l~~~~~eA~~~~el~~~~~Al~l~P~~ 273 (382)
T 2h6f_A 245 SNTTGYNDRAVLEREVQYTLEMIKLVPHN 273 (382)
T ss_dssp HHTTCSCSHHHHHHHHHHHHHHHHHSTTC
T ss_pred HHhcCcchHHHHHHHHHHHHHHHHHCCCC
Confidence 55 3333555 35566666666543
|
| >3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus} | Back alignment and structure |
|---|
Probab=99.50 E-value=1.5e-13 Score=119.58 Aligned_cols=96 Identities=9% Similarity=0.016 Sum_probs=90.0
Q ss_pred HHhHHHhhCCHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhcCCCchHHHHHHHHHHHhC---
Q 014478 325 HGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAACLFSL--- 401 (424)
Q Consensus 325 ~g~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~~--- 401 (424)
.|..+++.|++++|+..|+++++++|+ +..+++++|.+|..+|++++|+..|+++++++|+++.+|+++|.+|+.+
T Consensus 60 lg~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~~~~ 138 (208)
T 3urz_A 60 LALAYKKNRNYDKAYLFYKELLQKAPN-NVDCLEACAEMQVCRGQEKDALRMYEKILQLEADNLAANIFLGNYYYLTAEQ 138 (208)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHCCCHHHHHHHHHHHHHHCCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHhHH
Confidence 899999999999999999999999999 9999999999999999999999999999999999999999988877443
Q ss_pred --------------------------------CChHHHHHHHHHHHhchhhc
Q 014478 402 --------------------------------GMENDARETLKDGTNLEAKK 421 (424)
Q Consensus 402 --------------------------------~~~~~A~~~~~~al~l~~~~ 421 (424)
|+|++|+.+|++|++++|+.
T Consensus 139 ~~~~~~~~~~~~~~~~~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~P~~ 190 (208)
T 3urz_A 139 EKKKLETDYKKLSSPTKMQYARYRDGLSKLFTTRYEKARNSLQKVILRFPST 190 (208)
T ss_dssp HHHHHHHHHC---CCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHTTTSCCH
T ss_pred HHHHHHHHHHHHhCCCchhHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCH
Confidence 46899999999999999963
|
| >2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=99.49 E-value=1.5e-13 Score=120.40 Aligned_cols=102 Identities=14% Similarity=0.042 Sum_probs=87.6
Q ss_pred HHHHHHHHHhHHHhh-----------CCHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhcCCC
Q 014478 318 ETLNSKKHGDTAFRA-----------KDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPD 386 (424)
Q Consensus 318 ~~~~~~~~g~~~~~~-----------g~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~ 386 (424)
....+...|..+... |++++|++.|+++++++|+ +..++.++|.+|..+|++++|+..|++|++++ +
T Consensus 72 ~~~a~~~lg~~~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~P~-~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~-~ 149 (217)
T 2pl2_A 72 YLGGYMVLSEAYVALYRQAEDRERGKGYLEQALSVLKDAERVNPR-YAPLHLQRGLVYALLGERDKAEASLKQALALE-D 149 (217)
T ss_dssp CHHHHHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-C
T ss_pred cHHHHHHHHHHHHHhhhhhhhhcccccCHHHHHHHHHHHHHhCcc-cHHHHHHHHHHHHHcCChHHHHHHHHHHHhcc-c
Confidence 345666778888888 8888888888888888888 88888888888888888888888888888888 8
Q ss_pred chHHHHHHHHHHHhCCChHHHHHHHHHHHhchhhc
Q 014478 387 WPTALYLQAACLFSLGMENDARETLKDGTNLEAKK 421 (424)
Q Consensus 387 ~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~ 421 (424)
++.+++++|.+|..+|++++|+..|+++++++|.+
T Consensus 150 ~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~P~~ 184 (217)
T 2pl2_A 150 TPEIRSALAELYLSMGRLDEALAQYAKALEQAPKD 184 (217)
T ss_dssp CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTC
T ss_pred chHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC
Confidence 88888888888888888888888888888888864
|
| >1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A | Back alignment and structure |
|---|
Probab=99.48 E-value=2.1e-13 Score=108.11 Aligned_cols=102 Identities=18% Similarity=0.162 Sum_probs=96.8
Q ss_pred HHHHHHHHHhHHHhhCCHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhcCCCc-------hHH
Q 014478 318 ETLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDW-------PTA 390 (424)
Q Consensus 318 ~~~~~~~~g~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~-------~~a 390 (424)
.+..+...|..++..|++++|+..|.++++.+|. +..++.++|.+|..+|++++|+..+++++.++|++ ..+
T Consensus 3 ~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~-~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~ 81 (131)
T 1elr_A 3 QALKEKELGNDAYKKKDFDTALKHYDKAKELDPT-NMTYITNQAAVYFEKGDYNKCRELCEKAIEVGRENREDYRQIAKA 81 (131)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHSTTCHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCc-cHHHHHHHHHHHHHhccHHHHHHHHHHHHhhccccchhHHHHHHH
Confidence 4566788999999999999999999999999999 99999999999999999999999999999999988 999
Q ss_pred HHHHHHHHHhCCChHHHHHHHHHHHhchhh
Q 014478 391 LYLQAACLFSLGMENDARETLKDGTNLEAK 420 (424)
Q Consensus 391 ~~~~g~~~~~~~~~~~A~~~~~~al~l~~~ 420 (424)
++++|.++..+|++++|+..|+++++++|+
T Consensus 82 ~~~la~~~~~~~~~~~A~~~~~~~~~~~~~ 111 (131)
T 1elr_A 82 YARIGNSYFKEEKYKDAIHFYNKSLAEHRT 111 (131)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCCC
T ss_pred HHHHHHHHHHhccHHHHHHHHHHHHHhCCC
Confidence 999999999999999999999999998874
|
| >1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A | Back alignment and structure |
|---|
Probab=99.46 E-value=1.2e-12 Score=102.71 Aligned_cols=102 Identities=16% Similarity=0.222 Sum_probs=97.2
Q ss_pred HHHHHHHHhHHHhhCCHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhcCCCchHHHHHHHHHH
Q 014478 319 TLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAACL 398 (424)
Q Consensus 319 ~~~~~~~g~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~ 398 (424)
+..+...|..++..|++++|++.|.++++.+|. +..++.++|.++...|++++|+..++++++.+|++..+++.+|.++
T Consensus 9 ~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~ 87 (125)
T 1na0_A 9 AEAWYNLGNAYYKQGDYDEAIEYYQKALELDPN-NAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAWYNLGNAY 87 (125)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCcC-cHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCccHHHHHHHHHHH
Confidence 456678899999999999999999999999999 9999999999999999999999999999999999999999999999
Q ss_pred HhCCChHHHHHHHHHHHhchhhc
Q 014478 399 FSLGMENDARETLKDGTNLEAKK 421 (424)
Q Consensus 399 ~~~~~~~~A~~~~~~al~l~~~~ 421 (424)
..+|++++|+..|+++++++|.+
T Consensus 88 ~~~~~~~~A~~~~~~~~~~~~~~ 110 (125)
T 1na0_A 88 YKQGDYDEAIEYYQKALELDPNN 110 (125)
T ss_dssp HHTTCHHHHHHHHHHHHHHCTTC
T ss_pred HHhcCHHHHHHHHHHHHHhCCCc
Confidence 99999999999999999999864
|
| >3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A | Back alignment and structure |
|---|
Probab=99.45 E-value=7.1e-13 Score=112.46 Aligned_cols=100 Identities=20% Similarity=0.164 Sum_probs=63.1
Q ss_pred HHHHHHhHHHhhCCHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhcCCCchHHHHHHHHHHHh
Q 014478 321 NSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAACLFS 400 (424)
Q Consensus 321 ~~~~~g~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~ 400 (424)
.+...|..+.+.|++++|++.+.+++..+|+ ...++.++|.++...++++.|+..+.+++.++|++..+++.+|.++..
T Consensus 41 ~~~~la~~~~~~~~~~~a~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~a~~~~~~a~~~~~~~~~~~~~lg~~~~~ 119 (184)
T 3vtx_A 41 TLLKLGKTYMDIGLPNDAIESLKKFVVLDTT-SAEAYYILGSANFMIDEKQAAIDALQRAIALNTVYADAYYKLGLVYDS 119 (184)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCCC-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHhcCch-hHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCccchHHHHHHHHHHHH
Confidence 3444455555555555555555555555554 555555555555555555666666666667777777777777777777
Q ss_pred CCChHHHHHHHHHHHhchhhc
Q 014478 401 LGMENDARETLKDGTNLEAKK 421 (424)
Q Consensus 401 ~~~~~~A~~~~~~al~l~~~~ 421 (424)
+|++++|++.|+++++++|.+
T Consensus 120 ~g~~~~A~~~~~~~l~~~p~~ 140 (184)
T 3vtx_A 120 MGEHDKAIEAYEKTISIKPGF 140 (184)
T ss_dssp TTCHHHHHHHHHHHHHHCTTC
T ss_pred hCCchhHHHHHHHHHHhcchh
Confidence 777777777777777777754
|
| >1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3 | Back alignment and structure |
|---|
Probab=99.45 E-value=1.3e-13 Score=135.55 Aligned_cols=105 Identities=26% Similarity=0.368 Sum_probs=99.6
Q ss_pred HHHHHHHHHHhHHHhhCCHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhcCCCchHHHHHHHH
Q 014478 317 QETLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAA 396 (424)
Q Consensus 317 ~~~~~~~~~g~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~ 396 (424)
..+..+...|..+++.|+|++|++.|++|++.+|+ +..+++++|.+|.++|++++|+..+++|++++|+++.+|+++|.
T Consensus 4 ~~a~~~~~lg~~~~~~g~~~~A~~~~~~Al~~~p~-~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~lg~ 82 (477)
T 1wao_1 4 KRAEELKTQANDYFKAKDYENAIKFYSQAIELNPS-NAIYYGNRSLAYLRTECYGYALGDATRAIELDKKYIKGYYRRAA 82 (477)
T ss_dssp HHHTTSSSSSSSTTTTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHSCTTCHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCc-cHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCCHHHHHHHHH
Confidence 34566778899999999999999999999999999 99999999999999999999999999999999999999999999
Q ss_pred HHHhCCChHHHHHHHHHHHhchhhcC
Q 014478 397 CLFSLGMENDARETLKDGTNLEAKKN 422 (424)
Q Consensus 397 ~~~~~~~~~~A~~~~~~al~l~~~~~ 422 (424)
+|..+|++++|++.|++|++++|++.
T Consensus 83 ~~~~~g~~~eA~~~~~~al~~~p~~~ 108 (477)
T 1wao_1 83 SNMALGKFRAALRDYETVVKVKPHDK 108 (477)
T ss_dssp HHHHHTCHHHHHHHHHHHHHHSTTCT
T ss_pred HHHHcCCHHHHHHHHHHHHHhCCCCH
Confidence 99999999999999999999998753
|
| >4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis} | Back alignment and structure |
|---|
Probab=99.45 E-value=6.6e-13 Score=116.86 Aligned_cols=100 Identities=17% Similarity=0.159 Sum_probs=95.7
Q ss_pred HHHHHHHhHHHhhCCHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhcCCCch-------HHHH
Q 014478 320 LNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWP-------TALY 392 (424)
Q Consensus 320 ~~~~~~g~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~-------~a~~ 392 (424)
..+...|..++..|++++|++.|+++++.+|+ +..++.++|.+|..+|++++|+..++++++++|+++ .+|+
T Consensus 43 ~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~-~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~ 121 (228)
T 4i17_A 43 VTAYNCGVCADNIKKYKEAADYFDIAIKKNYN-LANAYIGKSAAYRDMKNNQEYIATLTEGIKAVPGNATIEKLYAIYYL 121 (228)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCS-HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhcHHHHHHHHHHHHHhCcc-hHHHHHHHHHHHHHcccHHHHHHHHHHHHHHCCCcHHHHHHHHHHHH
Confidence 45556899999999999999999999999999 999999999999999999999999999999999999 7799
Q ss_pred HHHHHHHhCCChHHHHHHHHHHHhchhh
Q 014478 393 LQAACLFSLGMENDARETLKDGTNLEAK 420 (424)
Q Consensus 393 ~~g~~~~~~~~~~~A~~~~~~al~l~~~ 420 (424)
++|.++..+|++++|+..|+++++++|.
T Consensus 122 ~~g~~~~~~~~~~~A~~~~~~al~~~p~ 149 (228)
T 4i17_A 122 KEGQKFQQAGNIEKAEENYKHATDVTSK 149 (228)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHTTSSCH
T ss_pred HHhHHHHHhccHHHHHHHHHHHHhcCCC
Confidence 9999999999999999999999999987
|
| >1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B* | Back alignment and structure |
|---|
Probab=99.45 E-value=8.4e-13 Score=114.71 Aligned_cols=102 Identities=18% Similarity=0.112 Sum_probs=96.6
Q ss_pred HHHHHHHHhHHHhhCCHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhcCCCch----------
Q 014478 319 TLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWP---------- 388 (424)
Q Consensus 319 ~~~~~~~g~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~---------- 388 (424)
+..+...|..++..|++++|++.|.++++.+|+ +..+++++|.+|..+|++++|+..+++++++.|++.
T Consensus 37 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~-~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~ 115 (213)
T 1hh8_A 37 SRICFNIGCMYTILKNMTEAEKAFTRSINRDKH-LAVAYFQRGMLYYQTEKYDLAIKDLKEALIQLRGNQLIDYKILGLQ 115 (213)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTTTCSEEECGGGTBC
T ss_pred hHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcc-chHHHHHHHHHHHHcccHHHHHHHHHHHHHhCCCccHHHHHHhccc
Confidence 346778999999999999999999999999999 999999999999999999999999999999888877
Q ss_pred ------HHHHHHHHHHHhCCChHHHHHHHHHHHhchhhc
Q 014478 389 ------TALYLQAACLFSLGMENDARETLKDGTNLEAKK 421 (424)
Q Consensus 389 ------~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~ 421 (424)
.+++++|.++..+|++++|+..|+++++++|+.
T Consensus 116 ~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~ 154 (213)
T 1hh8_A 116 FKLFACEVLYNIAFMYAKKEEWKKAEEQLALATSMKSEP 154 (213)
T ss_dssp CEEEHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCCSG
T ss_pred cCccchHHHHHHHHHHHHccCHHHHHHHHHHHHHcCccc
Confidence 999999999999999999999999999999864
|
| >2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli} | Back alignment and structure |
|---|
Probab=99.45 E-value=7.8e-13 Score=111.58 Aligned_cols=104 Identities=17% Similarity=0.130 Sum_probs=98.5
Q ss_pred HHHHHHHHHhHHHhhCCHHHHHHHHHHHhcCCCCCCHHHHHHHHHH-HHhcCCh--HHHHHHHHHHHhcCCCchHHHHHH
Q 014478 318 ETLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLS-YLMNDMP--QEALGDAMQAQVVSPDWPTALYLQ 394 (424)
Q Consensus 318 ~~~~~~~~g~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~-~~~~~~~--~~A~~~~~~al~~~p~~~~a~~~~ 394 (424)
....+...|..++..|++++|++.|.++++.+|+ +..++.++|.+ +...|++ ++|+..++++++++|++..+++++
T Consensus 43 ~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~-~~~~~~~la~~l~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l 121 (177)
T 2e2e_A 43 NSEQWALLGEYYLWQNDYSNSLLAYRQALQLRGE-NAELYAALATVLYYQASQHMTAQTRAMIDKALALDSNEITALMLL 121 (177)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHCS-CHHHHHHHHHHHHHHTTTCCCHHHHHHHHHHHHHCTTCHHHHHHH
T ss_pred cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCC-CHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHhCCCcHHHHHHH
Confidence 3456788999999999999999999999999999 99999999999 8899999 999999999999999999999999
Q ss_pred HHHHHhCCChHHHHHHHHHHHhchhhcC
Q 014478 395 AACLFSLGMENDARETLKDGTNLEAKKN 422 (424)
Q Consensus 395 g~~~~~~~~~~~A~~~~~~al~l~~~~~ 422 (424)
|.++..+|++++|+..|+++++++|.+.
T Consensus 122 a~~~~~~g~~~~A~~~~~~al~~~p~~~ 149 (177)
T 2e2e_A 122 ASDAFMQANYAQAIELWQKVMDLNSPRI 149 (177)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHTCCTTS
T ss_pred HHHHHHcccHHHHHHHHHHHHhhCCCCc
Confidence 9999999999999999999999999753
|
| >2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.44 E-value=5.2e-14 Score=108.75 Aligned_cols=96 Identities=15% Similarity=0.218 Sum_probs=89.9
Q ss_pred HHHHHHHHHhHHHhhCCHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhcCCCc------hHHH
Q 014478 318 ETLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDW------PTAL 391 (424)
Q Consensus 318 ~~~~~~~~g~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~------~~a~ 391 (424)
.+..+...|..++..|+|++|++.|+++++.+|+ +..++.++|.+|..+|++++|+..++++++++|++ ..++
T Consensus 3 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~-~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~ 81 (111)
T 2l6j_A 3 QFEKQKEQGNSLFKQGLYREAVHCYDQLITAQPQ-NPVGYSNKAMALIKLGEYTQAIQMCQQGLRYTSTAEHVAIRSKLQ 81 (111)
T ss_dssp HHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHTSCSSTTSHHHHHHHH
T ss_pred hHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCC-CHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCccHHHHHHHHH
Confidence 4567788999999999999999999999999999 99999999999999999999999999999999999 9999
Q ss_pred HHHHHHHHhCCChHHHHHHHHHH
Q 014478 392 YLQAACLFSLGMENDARETLKDG 414 (424)
Q Consensus 392 ~~~g~~~~~~~~~~~A~~~~~~a 414 (424)
+++|.++..+|++++|+..|++.
T Consensus 82 ~~~~~~~~~~~~~~~a~~~~~~~ 104 (111)
T 2l6j_A 82 YRLELAQGAVGSVQIPVVEVDEL 104 (111)
T ss_dssp HHHHHHHHHHHCCCCCSSSSSSC
T ss_pred HHHHHHHHHHHhHhhhHhHHHHh
Confidence 99999999999999988776653
|
| >2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis} | Back alignment and structure |
|---|
Probab=99.43 E-value=5.1e-13 Score=104.23 Aligned_cols=85 Identities=15% Similarity=0.134 Sum_probs=82.1
Q ss_pred HHHHHHHHHHhcCCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhcCCCchHHHHHHHHHHHhCCChHHHHHHHHHHH
Q 014478 336 STAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAACLFSLGMENDARETLKDGT 415 (424)
Q Consensus 336 ~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al 415 (424)
++|++.|.++++.+|+ +..+++++|.+|...|++++|+..|+++++++|++..+|+++|.++..+|++++|+..|++++
T Consensus 2 ~~a~~~~~~al~~~p~-~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~A~~~~~~al 80 (115)
T 2kat_A 2 QAITERLEAMLAQGTD-NMLLRFTLGKTYAEHEQFDAALPHLRAALDFDPTYSVAWKWLGKTLQGQGDRAGARQAWESGL 80 (115)
T ss_dssp CCHHHHHHHHHTTTCC-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHhCCC-cHHHHHHHHHHHHHccCHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 4689999999999999 999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hchhhc
Q 014478 416 NLEAKK 421 (424)
Q Consensus 416 ~l~~~~ 421 (424)
+++|..
T Consensus 81 ~~~~~~ 86 (115)
T 2kat_A 81 AAAQSR 86 (115)
T ss_dssp HHHHHH
T ss_pred Hhcccc
Confidence 999864
|
| >3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A | Back alignment and structure |
|---|
Probab=99.42 E-value=1e-13 Score=114.03 Aligned_cols=84 Identities=7% Similarity=-0.227 Sum_probs=79.8
Q ss_pred HHHHHHHHHhcCCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhcCCCchHHHHHHHHHHHhCCChHHHHHHHHHHHh
Q 014478 337 TAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAACLFSLGMENDARETLKDGTN 416 (424)
Q Consensus 337 ~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~ 416 (424)
.+-..|.++++++|+ +..+++++|.++.++|++++|+..|++++.++|+++.+|+++|.+|..+|+|++|+.+|++|++
T Consensus 20 ~~~~~l~~al~l~p~-~~~~~~~lg~~~~~~g~~~eA~~~~~~al~~~P~~~~~~~~lg~~~~~~g~~~~Ai~~~~~al~ 98 (151)
T 3gyz_A 20 NSGATLKDINAIPDD-MMDDIYSYAYDFYNKGRIEEAEVFFRFLCIYDFYNVDYIMGLAAIYQIKEQFQQAADLYAVAFA 98 (151)
T ss_dssp HTSCCTGGGCCSCHH-HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HCCCCHHHHhCCCHH-HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHccHHHHHHHHHHHHh
Confidence 344667899999999 9999999999999999999999999999999999999999999999999999999999999999
Q ss_pred chhhc
Q 014478 417 LEAKK 421 (424)
Q Consensus 417 l~~~~ 421 (424)
++|++
T Consensus 99 l~P~~ 103 (151)
T 3gyz_A 99 LGKND 103 (151)
T ss_dssp HSSSC
T ss_pred hCCCC
Confidence 99975
|
| >1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B* | Back alignment and structure |
|---|
Probab=99.39 E-value=3.3e-12 Score=110.87 Aligned_cols=100 Identities=14% Similarity=0.091 Sum_probs=93.5
Q ss_pred HHHHHHHHHhHHHhhCCHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhcCCCchHHHHHHHHH
Q 014478 318 ETLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAAC 397 (424)
Q Consensus 318 ~~~~~~~~g~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~ 397 (424)
++..+...|..++..|+|++|++.|++++ +| +..+++++|.+|..+|++++|+..|+++++++|+++.+++++|.+
T Consensus 5 ~~~~~~~~g~~~~~~~~~~~A~~~~~~a~--~~--~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~lg~~ 80 (213)
T 1hh8_A 5 EAISLWNEGVLAADKKDWKGALDAFSAVQ--DP--HSRICFNIGCMYTILKNMTEAEKAFTRSINRDKHLAVAYFQRGML 80 (213)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHTSS--SC--CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCHHHHHHHHHHHc--CC--ChHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCccchHHHHHHHHH
Confidence 45667889999999999999999999996 33 678999999999999999999999999999999999999999999
Q ss_pred HHhCCChHHHHHHHHHHHhchhhc
Q 014478 398 LFSLGMENDARETLKDGTNLEAKK 421 (424)
Q Consensus 398 ~~~~~~~~~A~~~~~~al~l~~~~ 421 (424)
+..+|++++|+.+|++++++.|++
T Consensus 81 ~~~~~~~~~A~~~~~~al~~~~~~ 104 (213)
T 1hh8_A 81 YYQTEKYDLAIKDLKEALIQLRGN 104 (213)
T ss_dssp HHHTTCHHHHHHHHHHHHHTTTTC
T ss_pred HHHcccHHHHHHHHHHHHHhCCCc
Confidence 999999999999999999988864
|
| >1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1 | Back alignment and structure |
|---|
Probab=99.39 E-value=3.6e-12 Score=114.93 Aligned_cols=104 Identities=12% Similarity=-0.011 Sum_probs=99.4
Q ss_pred HHHHHHHHHHhHHHhhCCHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhcCCCchHHHHHHHH
Q 014478 317 QETLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAA 396 (424)
Q Consensus 317 ~~~~~~~~~g~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~ 396 (424)
..+..+...|..++..|++++|++.|+++++.+|+ +..++.++|.+|...|++++|+..++++++++|++..+++++|.
T Consensus 41 ~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~-~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~la~ 119 (275)
T 1xnf_A 41 ERAQLLYERGVLYDSLGLRALARNDFSQALAIRPD-MPEVFNYLGIYLTQAGNFDAAYEAFDSVLELDPTYNYAHLNRGI 119 (275)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCC-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHcccHHHHHHHHHHHHHcCCC-cHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCccccHHHHHHHH
Confidence 44667788999999999999999999999999999 99999999999999999999999999999999999999999999
Q ss_pred HHHhCCChHHHHHHHHHHHhchhhc
Q 014478 397 CLFSLGMENDARETLKDGTNLEAKK 421 (424)
Q Consensus 397 ~~~~~~~~~~A~~~~~~al~l~~~~ 421 (424)
++..+|++++|+..|+++++++|.+
T Consensus 120 ~~~~~g~~~~A~~~~~~a~~~~~~~ 144 (275)
T 1xnf_A 120 ALYYGGRDKLAQDDLLAFYQDDPND 144 (275)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHCTTC
T ss_pred HHHHhccHHHHHHHHHHHHHhCCCC
Confidence 9999999999999999999999864
|
| >3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.36 E-value=6.7e-12 Score=111.77 Aligned_cols=101 Identities=20% Similarity=0.265 Sum_probs=97.2
Q ss_pred HHHHHHHHHHhHHHhhCCHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhcCCCchHHHHHHHH
Q 014478 317 QETLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAA 396 (424)
Q Consensus 317 ~~~~~~~~~g~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~ 396 (424)
.....+...|..++..|++++|++.|+++++.+|. +..++.++|.+|..+|++++|+..++++++++|+++.+++.+|.
T Consensus 137 ~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~-~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~l~~ 215 (258)
T 3uq3_A 137 EKAEEARLEGKEYFTKSDWPNAVKAYTEMIKRAPE-DARGYSNRAAALAKLMSFPEAIADCNKAIEKDPNFVRAYIRKAT 215 (258)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCcc-cHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCHHHHHHHHHHHH
Confidence 34556778999999999999999999999999999 99999999999999999999999999999999999999999999
Q ss_pred HHHhCCChHHHHHHHHHHHhch
Q 014478 397 CLFSLGMENDARETLKDGTNLE 418 (424)
Q Consensus 397 ~~~~~~~~~~A~~~~~~al~l~ 418 (424)
++..+|++++|+..|+++++++
T Consensus 216 ~~~~~g~~~~A~~~~~~a~~~~ 237 (258)
T 3uq3_A 216 AQIAVKEYASALETLDAARTKD 237 (258)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHhhHHHHHHHHHHHHHhC
Confidence 9999999999999999999999
|
| >3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus} | Back alignment and structure |
|---|
Probab=99.36 E-value=4.2e-12 Score=114.25 Aligned_cols=103 Identities=13% Similarity=0.086 Sum_probs=96.6
Q ss_pred HHHHHHHHHhHHHhhCCHHHHHHHHHHHhcCCCCCC---HHHHHHHHHHHHhcCChHHHHHHHHHHHhcCCCc---hHHH
Q 014478 318 ETLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVS---PTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDW---PTAL 391 (424)
Q Consensus 318 ~~~~~~~~g~~~~~~g~~~~A~~~~~~ai~~~p~~~---~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~---~~a~ 391 (424)
.+..+...|..+++.|+|++|++.|+++++.+|+ + ..+++++|.+|.++|++++|+..|+++++++|++ ..++
T Consensus 14 ~~~~~~~~a~~~~~~g~~~~A~~~~~~~l~~~p~-~~~~~~a~~~lg~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~a~ 92 (261)
T 3qky_A 14 SPQEAFERAMEFYNQGKYDRAIEYFKAVFTYGRT-HEWAADAQFYLARAYYQNKEYLLAASEYERFIQIYQIDPRVPQAE 92 (261)
T ss_dssp SHHHHHHHHHHHHHTTCHHHHHHHHHHHGGGCSC-STTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTTHHHHH
T ss_pred CHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCC-CcchHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHCCCCchhHHHH
Confidence 3567889999999999999999999999999998 7 8999999999999999999999999999998854 6799
Q ss_pred HHHHHHHHh--------CCChHHHHHHHHHHHhchhhc
Q 014478 392 YLQAACLFS--------LGMENDARETLKDGTNLEAKK 421 (424)
Q Consensus 392 ~~~g~~~~~--------~~~~~~A~~~~~~al~l~~~~ 421 (424)
+++|.++.. +|++++|+..|+++++.+|+.
T Consensus 93 ~~lg~~~~~~~~~~~~~~~~~~~A~~~~~~~l~~~p~~ 130 (261)
T 3qky_A 93 YERAMCYYKLSPPYELDQTDTRKAIEAFQLFIDRYPNH 130 (261)
T ss_dssp HHHHHHHHHHCCCTTSCCHHHHHHHHHHHHHHHHCTTC
T ss_pred HHHHHHHHHhcccccccchhHHHHHHHHHHHHHHCcCc
Confidence 999999999 999999999999999999975
|
| >4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans} | Back alignment and structure |
|---|
Probab=99.35 E-value=1.6e-12 Score=103.34 Aligned_cols=78 Identities=15% Similarity=0.048 Sum_probs=72.0
Q ss_pred HHHhcCCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhcCCCchHHHHHHHHHHHhCCChHHHHHHHHHHHhchhhc
Q 014478 343 TQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAACLFSLGMENDARETLKDGTNLEAKK 421 (424)
Q Consensus 343 ~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~ 421 (424)
.++..++|+ .+..+.++|.+|++.|+|++|+..|++||+++|+++.+|+++|.+|..+|++++|+.+|++|++++|+.
T Consensus 3 ar~a~inP~-~a~~~~~~G~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~ 80 (126)
T 4gco_A 3 ARLAYINPE-LAQEEKNKGNEYFKKGDYPTAMRHYNEAVKRDPENAILYSNRAACLTKLMEFQRALDDCDTCIRLDSKF 80 (126)
T ss_dssp ----CCCHH-HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC
T ss_pred hHHHHHCHH-HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHhhHHHhhccHHHHHHHHHHHHHhhhhh
Confidence 345568999 999999999999999999999999999999999999999999999999999999999999999999974
|
| >4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.34 E-value=5.1e-12 Score=119.28 Aligned_cols=102 Identities=17% Similarity=0.090 Sum_probs=98.0
Q ss_pred HHHHHHHHhHHHhhCCHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhcCCCchHHHHHHHHHH
Q 014478 319 TLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAACL 398 (424)
Q Consensus 319 ~~~~~~~g~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~ 398 (424)
+..+...|..+++.|++++|++.|+++++.+|+ +..+++++|.+|..+|++++|+..|+++++++|++..+++++|.+|
T Consensus 65 ~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~ 143 (365)
T 4eqf_A 65 WPGAFEEGLKRLKEGDLPVTILFMEAAILQDPG-DAEAWQFLGITQAENENEQAAIVALQRCLELQPNNLKALMALAVSY 143 (365)
T ss_dssp CTTHHHHHHHHHHHTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHCCCHHHHHHHHHHHHHhCcC-CHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHH
Confidence 445778999999999999999999999999999 9999999999999999999999999999999999999999999999
Q ss_pred HhCCChHHHHHHHHHHHhchhhc
Q 014478 399 FSLGMENDARETLKDGTNLEAKK 421 (424)
Q Consensus 399 ~~~~~~~~A~~~~~~al~l~~~~ 421 (424)
..+|++++|+..|+++++++|+.
T Consensus 144 ~~~g~~~~A~~~~~~al~~~p~~ 166 (365)
T 4eqf_A 144 TNTSHQQDACEALKNWIKQNPKY 166 (365)
T ss_dssp HHTTCHHHHHHHHHHHHHHCHHH
T ss_pred HccccHHHHHHHHHHHHHhCccc
Confidence 99999999999999999999874
|
| >2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A | Back alignment and structure |
|---|
Probab=99.34 E-value=1.8e-11 Score=97.01 Aligned_cols=100 Identities=17% Similarity=0.227 Sum_probs=94.8
Q ss_pred HHHHHHHhHHHhhCCHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhcCCCchHHHHHHHHHHH
Q 014478 320 LNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAACLF 399 (424)
Q Consensus 320 ~~~~~~g~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~ 399 (424)
..+...|..+...|++++|++.|.++++.+|. ...++.++|.++...|++++|+..+++++..+|++..+++.+|.++.
T Consensus 36 ~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~ 114 (136)
T 2fo7_A 36 EAWYNLGNAYYKQGDYDEAIEYYQKALELDPR-SAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPRSAEAWYNLGNAYY 114 (136)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHhcCHHHHHHHHHHHHHHCCC-chHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCChHHHHHHHHHHH
Confidence 34566788899999999999999999999999 89999999999999999999999999999999999999999999999
Q ss_pred hCCChHHHHHHHHHHHhchhh
Q 014478 400 SLGMENDARETLKDGTNLEAK 420 (424)
Q Consensus 400 ~~~~~~~A~~~~~~al~l~~~ 420 (424)
.+|++++|+..|+++++++|.
T Consensus 115 ~~~~~~~A~~~~~~~~~~~~~ 135 (136)
T 2fo7_A 115 KQGDYDEAIEYYQKALELDPR 135 (136)
T ss_dssp TTTCHHHHHHHHHHHHHHSTT
T ss_pred HHccHHHHHHHHHHHHccCCC
Confidence 999999999999999999885
|
| >2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=99.33 E-value=1.5e-12 Score=133.65 Aligned_cols=99 Identities=9% Similarity=-0.081 Sum_probs=53.9
Q ss_pred HHHHHHHhHHHhhCCHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhcCCCchHHHHHHHHHHH
Q 014478 320 LNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAACLF 399 (424)
Q Consensus 320 ~~~~~~g~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~ 399 (424)
..+...|..+++.|++++|++.|+++++.+|+ +..+|+++|.+|..+|++++|+..|++|++++|+++.+|+++|.++.
T Consensus 434 ~~~~~~a~~~~~~g~~~~A~~~~~~al~~~p~-~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~~~~~~~lg~~~~ 512 (681)
T 2pzi_A 434 ELPLMEVRALLDLGDVAKATRKLDDLAERVGW-RWRLVWYRAVAELLTGDYDSATKHFTEVLDTFPGELAPKLALAATAE 512 (681)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHHHCC-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTCSHHHHHHHHHHH
T ss_pred hHHHHHHHHHHhcCCHHHHHHHHHHHhccCcc-hHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHHHHHHHHHH
Confidence 34445555555555555555555555555555 55555555555555555555555555555555555555555555555
Q ss_pred hCCChHHHHHHHHHHHhchhh
Q 014478 400 SLGMENDARETLKDGTNLEAK 420 (424)
Q Consensus 400 ~~~~~~~A~~~~~~al~l~~~ 420 (424)
.+|++++ ++.|++|++++|.
T Consensus 513 ~~g~~~~-~~~~~~al~~~P~ 532 (681)
T 2pzi_A 513 LAGNTDE-HKFYQTVWSTNDG 532 (681)
T ss_dssp HHTCCCT-TCHHHHHHHHCTT
T ss_pred HcCChHH-HHHHHHHHHhCCc
Confidence 5555555 5555555555443
|
| >3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A | Back alignment and structure |
|---|
Probab=99.32 E-value=6.2e-12 Score=95.52 Aligned_cols=73 Identities=18% Similarity=0.162 Sum_probs=67.1
Q ss_pred CCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhcCCCchHHHHHHHHHHHhCCChHHHHHHHHHHHhchhhc
Q 014478 348 GGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAACLFSLGMENDARETLKDGTNLEAKK 421 (424)
Q Consensus 348 ~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~ 421 (424)
.+|+ +..+++++|.+|..+|++++|+..|+++++++|+++.+|+++|.+|..+|++++|+..|+++++++|+.
T Consensus 2 ~~p~-~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~~~~ 74 (100)
T 3ma5_A 2 EDPE-DPFTRYALAQEHLKHDNASRALALFEELVETDPDYVGTYYHLGKLYERLDRTDDAIDTYAQGIEVAREE 74 (100)
T ss_dssp ---C-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH
T ss_pred CCcc-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhhhcC
Confidence 4688 999999999999999999999999999999999999999999999999999999999999999998864
|
| >2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis} | Back alignment and structure |
|---|
Probab=99.32 E-value=3.3e-12 Score=96.56 Aligned_cols=92 Identities=16% Similarity=0.120 Sum_probs=85.7
Q ss_pred HHHHHhHHHhhCCHHHHHHHHHHHhcCCCCCCHH-HHHHHHHHHHhcCChHHHHHHHHHHHhcCCCchHHHHHHHHHHHh
Q 014478 322 SKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPT-VYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAACLFS 400 (424)
Q Consensus 322 ~~~~g~~~~~~g~~~~A~~~~~~ai~~~p~~~~~-~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~ 400 (424)
.+..|..++..|++++|++.|+++++.+|+ +.. +++++|.+|..+|++++|+..|+++++++|++..++++
T Consensus 3 ~~~~a~~~~~~~~~~~A~~~~~~al~~~p~-~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~------- 74 (99)
T 2kc7_A 3 QLKTIKELINQGDIENALQALEEFLQTEPV-GKDEAYYLMGNAYRKLGDWQKALNNYQSAIELNPDSPALQAR------- 74 (99)
T ss_dssp THHHHHHHHHHTCHHHHHHHHHHHHHHCSS-THHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTSTHHHHH-------
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHCCC-cHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCcHHHHHH-------
Confidence 356899999999999999999999999999 898 99999999999999999999999999999999999866
Q ss_pred CCChHHHHHHHHHHHhchhhcC
Q 014478 401 LGMENDARETLKDGTNLEAKKN 422 (424)
Q Consensus 401 ~~~~~~A~~~~~~al~l~~~~~ 422 (424)
+.+.+|+..|+++++.+|...
T Consensus 75 -~~~~~a~~~~~~~~~~~p~~~ 95 (99)
T 2kc7_A 75 -KMVMDILNFYNKDMYNQLEHH 95 (99)
T ss_dssp -HHHHHHHHHHCCTTHHHHCCS
T ss_pred -HHHHHHHHHHHHHhccCcccc
Confidence 778999999999999998754
|
| >2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A | Back alignment and structure |
|---|
Probab=99.32 E-value=8.9e-12 Score=109.63 Aligned_cols=104 Identities=10% Similarity=0.039 Sum_probs=94.5
Q ss_pred HHHHHHHHhHHHhhCCHHHHHHHHHHHhcCCCCCC--HHHHHHHHHHHHhcCChHHHHHHHHHHHhcCCCchH---HHHH
Q 014478 319 TLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVS--PTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPT---ALYL 393 (424)
Q Consensus 319 ~~~~~~~g~~~~~~g~~~~A~~~~~~ai~~~p~~~--~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~---a~~~ 393 (424)
+..+...|..+++.|+|++|++.|+++++..|... ..+++++|.+|.++|++++|+..|+++++.+|++.. +++.
T Consensus 4 ~~~~~~~a~~~~~~g~~~~A~~~~~~~~~~~p~~~~~~~a~~~lg~~~~~~~~~~~A~~~~~~~l~~~P~~~~~~~a~~~ 83 (225)
T 2yhc_A 4 PNEIYATAQQKLQDGNWRQAITQLEALDNRYPFGPYSQQVQLDLIYAYYKNADLPLAQAAIDRFIRLNPTHPNIDYVMYM 83 (225)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTTHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHCcCCCcHHHHHHH
Confidence 45677899999999999999999999999999722 478999999999999999999999999999999875 8999
Q ss_pred HHHHHHh------------------CCChHHHHHHHHHHHhchhhcC
Q 014478 394 QAACLFS------------------LGMENDARETLKDGTNLEAKKN 422 (424)
Q Consensus 394 ~g~~~~~------------------~~~~~~A~~~~~~al~l~~~~~ 422 (424)
+|.++.. +|++++|+..|+++++.+|+..
T Consensus 84 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~l~~~P~~~ 130 (225)
T 2yhc_A 84 RGLTNMALDDSALQGFFGVDRSDRDPQQARAAFSDFSKLVRGYPNSQ 130 (225)
T ss_dssp HHHHHHHHHC--------------CCHHHHHHHHHHHHHHTTCTTCT
T ss_pred HHHHHHhhhhhhhhhhhccchhhcCcHHHHHHHHHHHHHHHHCcCCh
Confidence 9999986 6899999999999999999753
|
| >2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A | Back alignment and structure |
|---|
Probab=99.32 E-value=2e-11 Score=96.77 Aligned_cols=100 Identities=17% Similarity=0.236 Sum_probs=94.7
Q ss_pred HHHHHHhHHHhhCCHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhcCCCchHHHHHHHHHHHh
Q 014478 321 NSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAACLFS 400 (424)
Q Consensus 321 ~~~~~g~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~ 400 (424)
.+...|..++..|++++|++.|.++++.+|. +...+.++|.++...|++++|+..+++++..+|++..+++.+|.++..
T Consensus 3 ~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~ 81 (136)
T 2fo7_A 3 AWYNLGNAYYKQGDYDEAIEYYQKALELDPR-SAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPRSAEAWYNLGNAYYK 81 (136)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHcCcHHHHHHHHHHHHHcCCc-chhHHHHHHHHHHHhcCHHHHHHHHHHHHHHCCCchHHHHHHHHHHHH
Confidence 3556788999999999999999999999999 999999999999999999999999999999999999999999999999
Q ss_pred CCChHHHHHHHHHHHhchhhc
Q 014478 401 LGMENDARETLKDGTNLEAKK 421 (424)
Q Consensus 401 ~~~~~~A~~~~~~al~l~~~~ 421 (424)
+|++++|+..|+++++.+|..
T Consensus 82 ~~~~~~A~~~~~~~~~~~~~~ 102 (136)
T 2fo7_A 82 QGDYDEAIEYYQKALELDPRS 102 (136)
T ss_dssp TTCHHHHHHHHHHHHHHCTTC
T ss_pred hcCHHHHHHHHHHHHHhCCCC
Confidence 999999999999999988753
|
| >4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.32 E-value=9.2e-12 Score=117.53 Aligned_cols=102 Identities=17% Similarity=0.183 Sum_probs=97.8
Q ss_pred HHHHHHHHhHHHhhCCHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhcCCCchHHHHHHHHHH
Q 014478 319 TLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAACL 398 (424)
Q Consensus 319 ~~~~~~~g~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~ 398 (424)
+..+...|..+...|++++|++.|+++++.+|+ +..++.++|.+|..+|++++|+..|+++++++|+++.+++++|.+|
T Consensus 213 ~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~ 291 (365)
T 4eqf_A 213 PDLQTGLGVLFHLSGEFNRAIDAFNAALTVRPE-DYSLWNRLGATLANGDRSEEAVEAYTRALEIQPGFIRSRYNLGISC 291 (365)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCchHHHHHHHHHH
Confidence 446678899999999999999999999999999 9999999999999999999999999999999999999999999999
Q ss_pred HhCCChHHHHHHHHHHHhchhhc
Q 014478 399 FSLGMENDARETLKDGTNLEAKK 421 (424)
Q Consensus 399 ~~~~~~~~A~~~~~~al~l~~~~ 421 (424)
..+|++++|+..|+++++++|+.
T Consensus 292 ~~~g~~~~A~~~~~~al~~~~~~ 314 (365)
T 4eqf_A 292 INLGAYREAVSNFLTALSLQRKS 314 (365)
T ss_dssp HHHTCCHHHHHHHHHHHHHHHCC
T ss_pred HHCCCHHHHHHHHHHHHHhCccc
Confidence 99999999999999999999873
|
| >2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A* | Back alignment and structure |
|---|
Probab=99.31 E-value=1.3e-11 Score=124.16 Aligned_cols=101 Identities=10% Similarity=-0.005 Sum_probs=62.8
Q ss_pred HHHHHHHHhHHHhhCCHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhcCCCchHHHHHHHHHH
Q 014478 319 TLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAACL 398 (424)
Q Consensus 319 ~~~~~~~g~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~ 398 (424)
...+...|..+...|++++|++.|+++++.+|+ +..+++++|.+|.++|++++|++.++++++++|++..+++++|.++
T Consensus 57 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~ 135 (568)
T 2vsy_A 57 PEAVARLGRVRWTQQRHAEAAVLLQQASDAAPE-HPGIALWLGHALEDAGQAEAAAAAYTRAHQLLPEEPYITAQLLNWR 135 (568)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Confidence 334455566666666666666666666666666 5666666666666666666666666666666666666666666666
Q ss_pred HhC---CChHHHHHHHHHHHhchhh
Q 014478 399 FSL---GMENDARETLKDGTNLEAK 420 (424)
Q Consensus 399 ~~~---~~~~~A~~~~~~al~l~~~ 420 (424)
..+ |++++|++.|+++++.+|.
T Consensus 136 ~~~~~~g~~~~A~~~~~~al~~~p~ 160 (568)
T 2vsy_A 136 RRLCDWRALDVLSAQVRAAVAQGVG 160 (568)
T ss_dssp HHTTCCTTHHHHHHHHHHHHHHTCC
T ss_pred HHhhccccHHHHHHHHHHHHhcCCc
Confidence 666 6666666666666666654
|
| >3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A | Back alignment and structure |
|---|
Probab=99.31 E-value=2.4e-11 Score=102.19 Aligned_cols=103 Identities=14% Similarity=0.074 Sum_probs=97.3
Q ss_pred HHHHHHHHhHHHhhCCHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhcCCCchHHHHHHHHHH
Q 014478 319 TLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAACL 398 (424)
Q Consensus 319 ~~~~~~~g~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~ 398 (424)
...+...|..++..|++++|++.|+++++.+|. +..++.++|.++...|++++|+..++++++.+|+++.+++.+|.++
T Consensus 76 ~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~ 154 (186)
T 3as5_A 76 VKVATVLGLTYVQVQKYDLAVPLLIKVAEANPI-NFNVRFRLGVALDNLGRFDEAIDSFKIALGLRPNEGKVHRAIAFSY 154 (186)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCcH-hHHHHHHHHHHHHHcCcHHHHHHHHHHHHhcCccchHHHHHHHHHH
Confidence 345667899999999999999999999999999 9999999999999999999999999999999999999999999999
Q ss_pred HhCCChHHHHHHHHHHHhchhhcC
Q 014478 399 FSLGMENDARETLKDGTNLEAKKN 422 (424)
Q Consensus 399 ~~~~~~~~A~~~~~~al~l~~~~~ 422 (424)
..+|++++|+..|+++++++|+..
T Consensus 155 ~~~~~~~~A~~~~~~~~~~~~~~~ 178 (186)
T 3as5_A 155 EQMGRHEEALPHFKKANELDEGAS 178 (186)
T ss_dssp HHTTCHHHHHHHHHHHHHHHHCCC
T ss_pred HHcCCHHHHHHHHHHHHHcCCCch
Confidence 999999999999999999998753
|
| >2r5s_A Uncharacterized protein VP0806; APC090868.1, vibrio parahaemolyticus RIMD 22 structural genomics, PSI-2, protein structure initiative; HET: MES; 2.14A {Vibrio parahaemolyticus} | Back alignment and structure |
|---|
Probab=99.31 E-value=6.6e-12 Score=105.93 Aligned_cols=103 Identities=13% Similarity=-0.010 Sum_probs=76.2
Q ss_pred HHHHHHHHHHhHHHhhCCHHHHHHHHHHHhcCCCCCCHHHHHHHHHH-HHhcCChHHHHHHHHHHHhcCCCchHHHHHHH
Q 014478 317 QETLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLS-YLMNDMPQEALGDAMQAQVVSPDWPTALYLQA 395 (424)
Q Consensus 317 ~~~~~~~~~g~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~-~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g 395 (424)
.....+...|..+...|++++|+..|+++++.+| +..++..++.+ +...+...+|+..++++++++|+++.+++++|
T Consensus 38 ~~~~a~~~la~~~~~~g~~~~A~~~~~~a~~~~p--~~~~~~~~~~~~~~~~~~~~~a~~~~~~al~~~P~~~~~~~~la 115 (176)
T 2r5s_A 38 SRGDVKLAKADCLLETKQFELAQELLATIPLEYQ--DNSYKSLIAKLELHQQAAESPELKRLEQELAANPDNFELACELA 115 (176)
T ss_dssp TSHHHHHHHHHHHHHTTCHHHHHHHHTTCCGGGC--CHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHSTTCHHHHHHHH
T ss_pred CcHHHHHHHHHHHHHCCCHHHHHHHHHHhhhccC--ChHHHHHHHHHHHHhhcccchHHHHHHHHHHhCCCCHHHHHHHH
Confidence 3445666777777777777777777777777777 33444444433 22222334567888888889999999999999
Q ss_pred HHHHhCCChHHHHHHHHHHHhchhhc
Q 014478 396 ACLFSLGMENDARETLKDGTNLEAKK 421 (424)
Q Consensus 396 ~~~~~~~~~~~A~~~~~~al~l~~~~ 421 (424)
.++..+|++++|+..|+++++++|..
T Consensus 116 ~~~~~~g~~~~A~~~~~~~l~~~p~~ 141 (176)
T 2r5s_A 116 VQYNQVGRDEEALELLWNILKVNLGA 141 (176)
T ss_dssp HHHHHTTCHHHHHHHHHHHHTTCTTT
T ss_pred HHHHHcccHHHHHHHHHHHHHhCccc
Confidence 99999999999999999999999863
|
| >2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A* | Back alignment and structure |
|---|
Probab=99.31 E-value=2e-12 Score=105.96 Aligned_cols=84 Identities=8% Similarity=-0.036 Sum_probs=79.3
Q ss_pred HHHHHHHHHhcCCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhcCCCchHHHHHHHHHHHhCCChHHHHHHHHHHHh
Q 014478 337 TAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAACLFSLGMENDARETLKDGTN 416 (424)
Q Consensus 337 ~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~ 416 (424)
.+-..|.++++.+|+ +..+++++|.++...|++++|+..|++++.++|+++.+|+++|.++..+|++++|+.+|+++++
T Consensus 5 ~~~~~~~~al~~~p~-~~~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~ 83 (148)
T 2vgx_A 5 SGGGTIAMLNEISSD-TLEQLYSLAFNQYQSGXYEDAHXVFQALCVLDHYDSRFFLGLGACRQAMGQYDLAIHSYSYGAV 83 (148)
T ss_dssp -CCCSHHHHTTCCHH-HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred chhhhHHHHHcCCHh-hHHHHHHHHHHHHHcCChHHHHHHHHHHHHcCcccHHHHHHHHHHHHHHhhHHHHHHHHHHHHh
Confidence 344568999999999 9999999999999999999999999999999999999999999999999999999999999999
Q ss_pred chhhc
Q 014478 417 LEAKK 421 (424)
Q Consensus 417 l~~~~ 421 (424)
++|.+
T Consensus 84 l~p~~ 88 (148)
T 2vgx_A 84 MDIXE 88 (148)
T ss_dssp HSTTC
T ss_pred cCCCC
Confidence 99975
|
| >3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A* | Back alignment and structure |
|---|
Probab=99.31 E-value=3.7e-12 Score=114.98 Aligned_cols=125 Identities=9% Similarity=-0.075 Sum_probs=95.7
Q ss_pred CcccceeeeecceecccccCCCc-hhhhHHHHHHHHHhcC-CCcCcceeEEEEEeCCeeeEEEecCCCCCHHhHhccCCC
Q 014478 4 RCSKFSICWFHCHLKSSVLESSD-LGETLNLEEAKAVGNL-RSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWET 81 (424)
Q Consensus 4 ~g~v~~~~~~~~~v~~~~~~~~~-~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~ 81 (424)
.+.||+....+..+.+|+..... .....+.+|+++++.+ .+.+++++++++...+..++||||++|.+|.+.+..
T Consensus 27 ~~~v~~~~~~~~~~vlK~~~~~~~~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv~e~i~G~~l~~~~~~--- 103 (263)
T 3tm0_A 27 PAKVYKLVGENENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNLLMSEADGVLCSEEYED--- 103 (263)
T ss_dssp SSEEEEEECSSCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCSSEEHHHHCCT---
T ss_pred CCeEEEEECCCCcEEEEeCCcccCCCHHHHHHHHHHHHHHhcCCCCCeEEEEEecCCceEEEEEecCCeehhhccCC---
Confidence 34577766555666666654321 2345688999999999 467899999999998889999999999999886421
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHh--------------------------------------------------------
Q 014478 82 QPMKWAMRLRVALYLAQALEYCSS-------------------------------------------------------- 105 (424)
Q Consensus 82 ~~l~~~~~~~i~~qi~~~L~~lH~-------------------------------------------------------- 105 (424)
......++.+++.+|..||+
T Consensus 104 ----~~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~ 179 (263)
T 3tm0_A 104 ----EQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENWEEDTPFKDPRELYDFLKTEKP 179 (263)
T ss_dssp ----TTCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCSGGGGSTTCSSSSHHHHHHHHHHCCC
T ss_pred ----cccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhccccccccccccccccCCCHHHHHHHHHhcCC
Confidence 12234788999999999998
Q ss_pred ---CCCcccccCCCCCeeecCCCCeEEccccccc
Q 014478 106 ---KGRALYHDLNAYRILFDKDGNPRLSSFGLMK 136 (424)
Q Consensus 106 ---~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~ 136 (424)
.. ++|+|++|.||++++++.+.|+||+.+.
T Consensus 180 ~~~~~-l~HgDl~~~Nil~~~~~~~~lIDwe~a~ 212 (263)
T 3tm0_A 180 EEELV-FSHGDLGDSNIFVKDGKVSGFIDLGRSG 212 (263)
T ss_dssp CCCEE-EECSSCCTTSEEEETTEEEEECCCTTCE
T ss_pred CCCce-EECCCCCcCcEEEECCcEEEEEEchhcc
Confidence 33 8999999999999876556799998654
|
| >3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A* | Back alignment and structure |
|---|
Probab=99.30 E-value=1.2e-11 Score=113.23 Aligned_cols=102 Identities=10% Similarity=0.022 Sum_probs=87.3
Q ss_pred HHHHHHHHhHHHhhCCHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHhcCChHHHH------------------------
Q 014478 319 TLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEAL------------------------ 374 (424)
Q Consensus 319 ~~~~~~~g~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~------------------------ 374 (424)
...+...|..+.+.|++++|++.|+++++.+|+ +..++.++|.+|..+|++++|+
T Consensus 117 ~~~~~~~a~~~~~~g~~~~A~~~~~~al~~~P~-~~~a~~~la~~~~~~g~~~~A~~~l~~~~~~~p~~~~~~~~~~~~l 195 (287)
T 3qou_A 117 EELXAQQAMQLMQESNYTDALPLLXDAWQLSNQ-NGEIGLLLAETLIALNRSEDAEAVLXTIPLQDQDTRYQGLVAQIEL 195 (287)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTTS-CHHHHHHHHHHHHHTTCHHHHHHHHTTSCGGGCSHHHHHHHHHHHH
T ss_pred hhhHHHHHHHHHhCCCHHHHHHHHHHHHHhCCc-chhHHHHHHHHHHHCCCHHHHHHHHHhCchhhcchHHHHHHHHHHH
Confidence 445677888888888888888888888888888 8888888888888888877765
Q ss_pred ----------HHHHHHHhcCCCchHHHHHHHHHHHhCCChHHHHHHHHHHHhchhhc
Q 014478 375 ----------GDAMQAQVVSPDWPTALYLQAACLFSLGMENDARETLKDGTNLEAKK 421 (424)
Q Consensus 375 ----------~~~~~al~~~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~ 421 (424)
..++++++++|+++.+++++|.+|..+|++++|+..|+++++++|..
T Consensus 196 ~~~~~~~~a~~~l~~al~~~P~~~~~~~~la~~l~~~g~~~~A~~~l~~~l~~~p~~ 252 (287)
T 3qou_A 196 LXQAADTPEIQQLQQQVAENPEDAALATQLALQLHQVGRNEEALELLFGHLRXDLTA 252 (287)
T ss_dssp HHHHTSCHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTG
T ss_pred HhhcccCccHHHHHHHHhcCCccHHHHHHHHHHHHHcccHHHHHHHHHHHHhccccc
Confidence 45566678899999999999999999999999999999999999875
|
| >3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.30 E-value=1.5e-11 Score=114.94 Aligned_cols=101 Identities=18% Similarity=0.257 Sum_probs=97.9
Q ss_pred HHHHHHHHHhHHHhhCCHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhcCCCchHHHHHHHHH
Q 014478 318 ETLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAAC 397 (424)
Q Consensus 318 ~~~~~~~~g~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~ 397 (424)
++..+...|..++..|+|++|++.|+++++.+|+ +..++.++|.++..+|++++|+..++++++++|++..+++.+|.+
T Consensus 2 ~~~~~~~~~~~~~~~g~~~~A~~~~~~~l~~~p~-~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~ 80 (359)
T 3ieg_A 2 DVEKHLELGKKLLAAGQLADALSQFHAAVDGDPD-NYIAYYRRATVFLAMGKSKAALPDLTKVIALKMDFTAARLQRGHL 80 (359)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCcc-cHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCcchHHHHHHHH
Confidence 3567889999999999999999999999999999 999999999999999999999999999999999999999999999
Q ss_pred HHhCCChHHHHHHHHHHHhchh
Q 014478 398 LFSLGMENDARETLKDGTNLEA 419 (424)
Q Consensus 398 ~~~~~~~~~A~~~~~~al~l~~ 419 (424)
+..+|++++|+..|+++++++|
T Consensus 81 ~~~~~~~~~A~~~~~~~~~~~~ 102 (359)
T 3ieg_A 81 LLKQGKLDEAEDDFKKVLKSNP 102 (359)
T ss_dssp HHHHTCHHHHHHHHHHHHTSCC
T ss_pred HHHcCChHHHHHHHHHHHhcCC
Confidence 9999999999999999999998
|
| >2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1 | Back alignment and structure |
|---|
Probab=99.29 E-value=2.2e-11 Score=107.55 Aligned_cols=100 Identities=15% Similarity=0.167 Sum_probs=59.4
Q ss_pred HHHHHHHhHHHhhCCHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhcCCCchHHHHHHHHHHH
Q 014478 320 LNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAACLF 399 (424)
Q Consensus 320 ~~~~~~g~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~ 399 (424)
..+...|..++..|++++|++.|.++++.+|. +..++.++|.+|..+|++++|+..++++++.+|++..+++.+|.++.
T Consensus 58 ~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~ 136 (243)
T 2q7f_A 58 IPYINFANLLSSVNELERALAFYDKALELDSS-AATAYYGAGNVYVVKEMYKEAKDMFEKALRAGMENGDLFYMLGTVLV 136 (243)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTCCSHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCc-chHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Confidence 34445555556666666666666666666665 55556666666666666666666666666666666666666666666
Q ss_pred hCCChHHHHHHHHHHHhchhh
Q 014478 400 SLGMENDARETLKDGTNLEAK 420 (424)
Q Consensus 400 ~~~~~~~A~~~~~~al~l~~~ 420 (424)
.+|++++|+..|+++++++|.
T Consensus 137 ~~~~~~~A~~~~~~~~~~~~~ 157 (243)
T 2q7f_A 137 KLEQPKLALPYLQRAVELNEN 157 (243)
T ss_dssp HTSCHHHHHHHHHHHHHHCTT
T ss_pred HhccHHHHHHHHHHHHHhCCc
Confidence 666666666666666555543
|
| >4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.27 E-value=8.1e-12 Score=122.73 Aligned_cols=101 Identities=13% Similarity=0.043 Sum_probs=96.1
Q ss_pred HHHHHHHhHHHhh---------CCHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHhc--------CChHHHHHHHHHHHh
Q 014478 320 LNSKKHGDTAFRA---------KDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMN--------DMPQEALGDAMQAQV 382 (424)
Q Consensus 320 ~~~~~~g~~~~~~---------g~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~--------~~~~~A~~~~~~al~ 382 (424)
..+...|..+... |++++|++.|++|++++|+ +..+|+++|.+|..+ |++++|+..|++|++
T Consensus 171 ~~~~~lg~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~lg~~~~~~~~~~~~~~g~~~~A~~~~~~al~ 249 (474)
T 4abn_A 171 VSLQNLSMVLRQLQTDSGDEHSRHVMDSVRQAKLAVQMDVL-DGRSWYILGNAYLSLYFNTGQNPKISQQALSAYAQAEK 249 (474)
T ss_dssp HHHHHHHHHHTTCCCSCHHHHHHHHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhccCChhhhhhhHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHHHHhhccccchHHHHHHHHHHHHH
Confidence 5667788888888 9999999999999999999 999999999999999 999999999999999
Q ss_pred cCC---CchHHHHHHHHHHHhCCChHHHHHHHHHHHhchhhc
Q 014478 383 VSP---DWPTALYLQAACLFSLGMENDARETLKDGTNLEAKK 421 (424)
Q Consensus 383 ~~p---~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~ 421 (424)
++| +++.+|+++|.+|..+|++++|++.|++|++++|..
T Consensus 250 ~~p~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~ 291 (474)
T 4abn_A 250 VDRKASSNPDLHLNRATLHKYEESYGEALEGFSQAAALDPAW 291 (474)
T ss_dssp HCGGGGGCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC
T ss_pred hCCCcccCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC
Confidence 999 999999999999999999999999999999999974
|
| >4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.27 E-value=9.4e-12 Score=122.28 Aligned_cols=102 Identities=12% Similarity=-0.019 Sum_probs=97.9
Q ss_pred HHHHHHHHHhHHHhhCCH-HHHHHHHHHHhcCCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhcCCCchHHHHHHHH
Q 014478 318 ETLNSKKHGDTAFRAKDF-STAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAA 396 (424)
Q Consensus 318 ~~~~~~~~g~~~~~~g~~-~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~ 396 (424)
.+..+...|..++..|+| ++|++.|+++++++|+ +..+|+++|.+|..+|++++|+..|++|++++|+ ..+++++|.
T Consensus 101 ~a~~~~~lg~~~~~~g~~~~~A~~~~~~al~~~p~-~~~a~~~lg~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~lg~ 178 (474)
T 4abn_A 101 EAQALMLKGKALNVTPDYSPEAEVLLSKAVKLEPE-LVEAWNQLGEVYWKKGDVTSAHTCFSGALTHCKN-KVSLQNLSM 178 (474)
T ss_dssp CHHHHHHHHHHHTSSSSCCHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHTTCCC-HHHHHHHHH
T ss_pred hHHHHHHHHHHHHhccccHHHHHHHHHHHHhhCCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCC-HHHHHHHHH
Confidence 456788899999999999 9999999999999999 9999999999999999999999999999999999 799999999
Q ss_pred HHHhC---------CChHHHHHHHHHHHhchhhc
Q 014478 397 CLFSL---------GMENDARETLKDGTNLEAKK 421 (424)
Q Consensus 397 ~~~~~---------~~~~~A~~~~~~al~l~~~~ 421 (424)
++..+ |++++|+..|++|++++|++
T Consensus 179 ~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~p~~ 212 (474)
T 4abn_A 179 VLRQLQTDSGDEHSRHVMDSVRQAKLAVQMDVLD 212 (474)
T ss_dssp HHTTCCCSCHHHHHHHHHHHHHHHHHHHHHCTTC
T ss_pred HHHHhccCChhhhhhhHHHHHHHHHHHHHhCCCC
Confidence 99999 99999999999999999974
|
| >3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A | Back alignment and structure |
|---|
Probab=99.27 E-value=4.6e-11 Score=100.36 Aligned_cols=102 Identities=12% Similarity=0.055 Sum_probs=95.9
Q ss_pred HHHHHHHHhHHHhhCCHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhcCCCchHHHHHHHHHH
Q 014478 319 TLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAACL 398 (424)
Q Consensus 319 ~~~~~~~g~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~ 398 (424)
...+...|..++..|++++|++.|.++++.+|. +..++.++|.++...|++++|+..+++++..+|++..+++.+|.++
T Consensus 42 ~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~ 120 (186)
T 3as5_A 42 VDVALHLGIAYVKTGAVDRGTELLERSLADAPD-NVKVATVLGLTYVQVQKYDLAVPLLIKVAEANPINFNVRFRLGVAL 120 (186)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCC-CHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCcHhHHHHHHHHHHH
Confidence 345667899999999999999999999999999 9999999999999999999999999999999999999999999999
Q ss_pred HhCCChHHHHHHHHHHHhchhhc
Q 014478 399 FSLGMENDARETLKDGTNLEAKK 421 (424)
Q Consensus 399 ~~~~~~~~A~~~~~~al~l~~~~ 421 (424)
..+|++++|+..|+++++.+|.+
T Consensus 121 ~~~~~~~~A~~~~~~~~~~~~~~ 143 (186)
T 3as5_A 121 DNLGRFDEAIDSFKIALGLRPNE 143 (186)
T ss_dssp HHTTCHHHHHHHHHHHHHHCTTC
T ss_pred HHcCcHHHHHHHHHHHHhcCccc
Confidence 99999999999999999998753
|
| >1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A | Back alignment and structure |
|---|
Probab=99.27 E-value=3.9e-11 Score=113.04 Aligned_cols=102 Identities=15% Similarity=0.117 Sum_probs=97.3
Q ss_pred HHHHHHHHhHHHhhCCHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhcCCCchHHHHHHHHHH
Q 014478 319 TLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAACL 398 (424)
Q Consensus 319 ~~~~~~~g~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~ 398 (424)
+..+...|..++..|++++|++.|+++++.+|+ +..++.++|.+|..+|++++|+..++++++++|+++.+++.+|.++
T Consensus 64 ~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~l~~~~ 142 (368)
T 1fch_A 64 HPQPFEEGLRRLQEGDLPNAVLLFEAAVQQDPK-HMEAWQYLGTTQAENEQELLAISALRRCLELKPDNQTALMALAVSF 142 (368)
T ss_dssp CSSHHHHHHHHHHTTCHHHHHHHHHHHHHSCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHCcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHH
Confidence 345667899999999999999999999999999 9999999999999999999999999999999999999999999999
Q ss_pred HhCCChHHHHHHHHHHHhchhhc
Q 014478 399 FSLGMENDARETLKDGTNLEAKK 421 (424)
Q Consensus 399 ~~~~~~~~A~~~~~~al~l~~~~ 421 (424)
..+|++++|+..|+++++++|..
T Consensus 143 ~~~g~~~~A~~~~~~~~~~~~~~ 165 (368)
T 1fch_A 143 TNESLQRQACEILRDWLRYTPAY 165 (368)
T ss_dssp HHTTCHHHHHHHHHHHHHTSTTT
T ss_pred HHcCCHHHHHHHHHHHHHhCcCc
Confidence 99999999999999999999864
|
| >1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A | Back alignment and structure |
|---|
Probab=99.27 E-value=3.9e-11 Score=88.67 Aligned_cols=84 Identities=14% Similarity=0.142 Sum_probs=78.4
Q ss_pred HHHHHHHHHhHHHhhCCHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhcCCCchHHHHHHHHH
Q 014478 318 ETLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAAC 397 (424)
Q Consensus 318 ~~~~~~~~g~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~ 397 (424)
.+..+...|..++..|++++|++.|.++++.+|+ +..++.++|.+|..+|++++|+..++++++++|++..+++++|.+
T Consensus 8 ~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~-~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~~~l~~~ 86 (91)
T 1na3_A 8 SAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPN-NAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAKQNLGNA 86 (91)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCCC-CHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCCHHHHHHHHHH
Confidence 3456778899999999999999999999999999 999999999999999999999999999999999999999999999
Q ss_pred HHhCC
Q 014478 398 LFSLG 402 (424)
Q Consensus 398 ~~~~~ 402 (424)
+..+|
T Consensus 87 ~~~~g 91 (91)
T 1na3_A 87 KQKQG 91 (91)
T ss_dssp HHHHC
T ss_pred HHhcC
Confidence 98764
|
| >2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A | Back alignment and structure |
|---|
Probab=99.26 E-value=3.3e-11 Score=116.89 Aligned_cols=106 Identities=18% Similarity=0.258 Sum_probs=100.4
Q ss_pred hHHHHHHHHHHHhHHHhhCCHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhcCCCchHHHHHH
Q 014478 315 QMQETLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQ 394 (424)
Q Consensus 315 ~~~~~~~~~~~g~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~ 394 (424)
....+..+...|..+++.|++++|++.|+++++.+|+ +..+++++|.+|..+|++++|+..++++++++|++..+++.+
T Consensus 22 ~p~~~~~~~~~~~~~~~~g~~~~A~~~~~~~l~~~p~-~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l 100 (450)
T 2y4t_A 22 SMADVEKHLELGKKLLAAGQLADALSQFHAAVDGDPD-NYIAYYRRATVFLAMGKSKAALPDLTKVIQLKMDFTAARLQR 100 (450)
T ss_dssp -CHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCc-cHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCcHHHHHHH
Confidence 3456778889999999999999999999999999999 999999999999999999999999999999999999999999
Q ss_pred HHHHHhCCChHHHHHHHHHHHhchhhc
Q 014478 395 AACLFSLGMENDARETLKDGTNLEAKK 421 (424)
Q Consensus 395 g~~~~~~~~~~~A~~~~~~al~l~~~~ 421 (424)
|.+|..+|++++|+..|+++++++|.+
T Consensus 101 ~~~~~~~g~~~~A~~~~~~~~~~~~~~ 127 (450)
T 2y4t_A 101 GHLLLKQGKLDEAEDDFKKVLKSNPSE 127 (450)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHTSCCCH
T ss_pred HHHHHHcCCHHHHHHHHHHHHhcCCCC
Confidence 999999999999999999999999864
|
| >1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A | Back alignment and structure |
|---|
Probab=99.26 E-value=3e-11 Score=113.77 Aligned_cols=102 Identities=16% Similarity=0.210 Sum_probs=98.0
Q ss_pred HHHHHHHHhHHHhhCCHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhcCCCchHHHHHHHHHH
Q 014478 319 TLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAACL 398 (424)
Q Consensus 319 ~~~~~~~g~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~ 398 (424)
+..+...|..+...|++++|++.|+++++.+|+ +..++.++|.+|..+|++++|+..++++++++|+++.+++++|.++
T Consensus 217 ~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~-~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~l~~~~ 295 (368)
T 1fch_A 217 PDVQCGLGVLFNLSGEYDKAVDCFTAALSVRPN-DYLLWNKLGATLANGNQSEEAVAAYRRALELQPGYIRSRYNLGISC 295 (368)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHH
Confidence 456678899999999999999999999999999 9999999999999999999999999999999999999999999999
Q ss_pred HhCCChHHHHHHHHHHHhchhhc
Q 014478 399 FSLGMENDARETLKDGTNLEAKK 421 (424)
Q Consensus 399 ~~~~~~~~A~~~~~~al~l~~~~ 421 (424)
..+|++++|+..|+++++++|+.
T Consensus 296 ~~~g~~~~A~~~~~~al~~~~~~ 318 (368)
T 1fch_A 296 INLGAHREAVEHFLEALNMQRKS 318 (368)
T ss_dssp HHHTCHHHHHHHHHHHHHHHHTC
T ss_pred HHCCCHHHHHHHHHHHHHhCCCC
Confidence 99999999999999999999875
|
| >2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.26 E-value=3.3e-11 Score=118.71 Aligned_cols=102 Identities=22% Similarity=0.240 Sum_probs=97.8
Q ss_pred HHHHHHHHHHhHHHhhCCHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhcCCCchHHHHHHHH
Q 014478 317 QETLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAA 396 (424)
Q Consensus 317 ~~~~~~~~~g~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~ 396 (424)
..+..++..|..+++.|+|++|++.|+++++.+| +..++.++|.+|..+|++++|+..++++++++|++..+++.+|.
T Consensus 4 ~~a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p--~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~ 81 (514)
T 2gw1_A 4 KYALALKDKGNQFFRNKKYDDAIKYYNWALELKE--DPVFYSNLSACYVSVGDLKKVVEMSTKALELKPDYSKVLLRRAS 81 (514)
T ss_dssp HHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHCC--CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCSCCHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHhccHHHHHHHHHHHHhcCc--cHHHHHhHHHHHHHHhhHHHHHHHHHHHhccChHHHHHHHHHHH
Confidence 4677899999999999999999999999999998 48899999999999999999999999999999999999999999
Q ss_pred HHHhCCChHHHHHHHHHHHhchhh
Q 014478 397 CLFSLGMENDARETLKDGTNLEAK 420 (424)
Q Consensus 397 ~~~~~~~~~~A~~~~~~al~l~~~ 420 (424)
++..+|++++|+..|+++++++|.
T Consensus 82 ~~~~~g~~~~A~~~~~~~~~~~~~ 105 (514)
T 2gw1_A 82 ANEGLGKFADAMFDLSVLSLNGDF 105 (514)
T ss_dssp HHHHTTCHHHHHHHHHHHHHSSSC
T ss_pred HHHHHhhHHHHHHHHHHHHhcCCC
Confidence 999999999999999999999874
|
| >2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli} | Back alignment and structure |
|---|
Probab=99.26 E-value=9.3e-13 Score=111.11 Aligned_cols=99 Identities=10% Similarity=0.068 Sum_probs=87.8
Q ss_pred HHHHHhHHHhhCCHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhcCCCchHHHHHHHHH-HHh
Q 014478 322 SKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAAC-LFS 400 (424)
Q Consensus 322 ~~~~g~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~-~~~ 400 (424)
+...+..+...|++++|++.|.++++.+|+ +..++..+|.+|...|++++|+..|+++++++|+++.+++++|.+ +..
T Consensus 13 ~~~~~~~~~~~~~~~~A~~~~~~al~~~p~-~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~l~~~ 91 (177)
T 2e2e_A 13 QRDPLHQFASQQNPEAQLQALQDKIRANPQ-NSEQWALLGEYYLWQNDYSNSLLAYRQALQLRGENAELYAALATVLYYQ 91 (177)
T ss_dssp SSTTTCCCC-----CCCCHHHHHHHHHCCS-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHCSCHHHHHHHHHHHHHH
T ss_pred HhhhhhhhhhccCHHHHHHHHHHHHHhCCC-cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHh
Confidence 334556678899999999999999999999 999999999999999999999999999999999999999999999 889
Q ss_pred CCCh--HHHHHHHHHHHhchhhc
Q 014478 401 LGME--NDARETLKDGTNLEAKK 421 (424)
Q Consensus 401 ~~~~--~~A~~~~~~al~l~~~~ 421 (424)
.|++ ++|+..|+++++++|.+
T Consensus 92 ~~~~~~~~A~~~~~~al~~~p~~ 114 (177)
T 2e2e_A 92 ASQHMTAQTRAMIDKALALDSNE 114 (177)
T ss_dssp TTTCCCHHHHHHHHHHHHHCTTC
T ss_pred cCCcchHHHHHHHHHHHHhCCCc
Confidence 9999 99999999999999864
|
| >3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.25 E-value=2.9e-11 Score=107.56 Aligned_cols=102 Identities=14% Similarity=0.124 Sum_probs=96.0
Q ss_pred HHHHHHHHHHhHHHhhCCHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhcCCCc-------hH
Q 014478 317 QETLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDW-------PT 389 (424)
Q Consensus 317 ~~~~~~~~~g~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~-------~~ 389 (424)
..+..+...|..++..|+|++|++.|+++++.+ . +..++.++|.+|..+|++++|+..++++++++|++ +.
T Consensus 3 ~~a~~~~~~g~~~~~~~~~~~A~~~~~~a~~~~-~-~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~ 80 (258)
T 3uq3_A 3 SMADKEKAEGNKFYKARQFDEAIEHYNKAWELH-K-DITYLNNRAAAEYEKGEYETAISTLNDAVEQGREMRADYKVISK 80 (258)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHS-C-CTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCHHHHHH
T ss_pred hHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhh-c-cHHHHHHHHHHHHHcccHHHHHHHHHHHHHhCcccccchHHHHH
Confidence 456788899999999999999999999999999 6 89999999999999999999999999999999987 79
Q ss_pred HHHHHHHHHHhCCChHHHHHHHHHHHhchhh
Q 014478 390 ALYLQAACLFSLGMENDARETLKDGTNLEAK 420 (424)
Q Consensus 390 a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~ 420 (424)
+++.+|.++..+|++++|+..|+++++++|.
T Consensus 81 ~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~ 111 (258)
T 3uq3_A 81 SFARIGNAYHKLGDLKKTIEYYQKSLTEHRT 111 (258)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCCC
T ss_pred HHHHHHHHHHHcccHHHHHHHHHHHHhcCch
Confidence 9999999999999999999999999996653
|
| >2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1 | Back alignment and structure |
|---|
Probab=99.25 E-value=4.4e-11 Score=105.59 Aligned_cols=102 Identities=12% Similarity=0.058 Sum_probs=97.1
Q ss_pred HHHHHHHHhHHHhhCCHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhcCCCchHHHHHHHHHH
Q 014478 319 TLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAACL 398 (424)
Q Consensus 319 ~~~~~~~g~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~ 398 (424)
...+...|..++..|++++|++.|.++++.+|+ +..++.++|.++...|++++|+..++++++.+|++..+++.+|.++
T Consensus 125 ~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~ 203 (243)
T 2q7f_A 125 GDLFYMLGTVLVKLEQPKLALPYLQRAVELNEN-DTEARFQFGMCLANEGMLDEALSQFAAVTEQDPGHADAFYNAGVTY 203 (243)
T ss_dssp HHHHHHHHHHHHHTSCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCc-cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcccHHHHHHHHHHH
Confidence 345677899999999999999999999999999 9999999999999999999999999999999999999999999999
Q ss_pred HhCCChHHHHHHHHHHHhchhhc
Q 014478 399 FSLGMENDARETLKDGTNLEAKK 421 (424)
Q Consensus 399 ~~~~~~~~A~~~~~~al~l~~~~ 421 (424)
..+|++++|+..|+++++++|++
T Consensus 204 ~~~~~~~~A~~~~~~~~~~~p~~ 226 (243)
T 2q7f_A 204 AYKENREKALEMLDKAIDIQPDH 226 (243)
T ss_dssp HHTTCTTHHHHHHHHHHHHCTTC
T ss_pred HHccCHHHHHHHHHHHHccCcch
Confidence 99999999999999999999874
|
| >3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A | Back alignment and structure |
|---|
Probab=99.25 E-value=2.1e-11 Score=121.08 Aligned_cols=104 Identities=25% Similarity=0.289 Sum_probs=94.2
Q ss_pred HHHHHHHHHHHhHHHhhCCHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhcCCCchHHHHHHH
Q 014478 316 MQETLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQA 395 (424)
Q Consensus 316 ~~~~~~~~~~g~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g 395 (424)
...+..+...|..+++.|+|++|++.|+++++.+|+ +..++.++|.+|..+|++++|+..++++++++|+++.+++.+|
T Consensus 22 ~~~a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la 100 (537)
T 3fp2_A 22 QAYAVQLKNRGNHFFTAKNFNEAIKYYQYAIELDPN-EPVFYSNISACYISTGDLEKVIEFTTKALEIKPDHSKALLRRA 100 (537)
T ss_dssp HHHHHHHHHHHHHHHHTTCCC-CHHHHHHHHHHCTT-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhCCC-CcHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCchHHHHHHHH
Confidence 345778899999999999999999999999999999 9999999999999999999999999999999999999999999
Q ss_pred HHHHhCCChHHHHHHHHHHHhchhhc
Q 014478 396 ACLFSLGMENDARETLKDGTNLEAKK 421 (424)
Q Consensus 396 ~~~~~~~~~~~A~~~~~~al~l~~~~ 421 (424)
.++..+|++++|+..|+ ++.++|..
T Consensus 101 ~~~~~~g~~~~A~~~~~-~~~~~~~~ 125 (537)
T 3fp2_A 101 SANESLGNFTDAMFDLS-VLSLNGDF 125 (537)
T ss_dssp HHHHHHTCHHHHHHHHH-HHC-----
T ss_pred HHHHHcCCHHHHHHHHH-HHhcCCCC
Confidence 99999999999999996 88888763
|
| >4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans} | Back alignment and structure |
|---|
Probab=99.24 E-value=2e-11 Score=97.14 Aligned_cols=70 Identities=10% Similarity=-0.064 Sum_probs=66.7
Q ss_pred CHHHHHHHHHHHHhcCChHHHHHHHHHHHhcCCCchHHHHHHHHHHHhCCChHHHHHHHHHHHhchhhcC
Q 014478 353 SPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAACLFSLGMENDARETLKDGTNLEAKKN 422 (424)
Q Consensus 353 ~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~~ 422 (424)
.+.++.++|.++.+.|+|++|+..|++||+++|+++.+|+++|.+|..+|+|++|+.+|++|++++|+..
T Consensus 7 ~A~a~~~lG~~~~~~~~~~~A~~~y~~Al~~~p~~~~~~~nlg~~~~~~~~~~~A~~~~~~al~~~~~~~ 76 (127)
T 4gcn_A 7 AAIAEKDLGNAAYKQKDFEKAHVHYDKAIELDPSNITFYNNKAAVYFEEKKFAECVQFCEKAVEVGRETR 76 (127)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHhHHHHHHHhhhHHHHHHHHHHHHHhCcccc
Confidence 4678899999999999999999999999999999999999999999999999999999999999999753
|
| >3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii} | Back alignment and structure |
|---|
Probab=99.24 E-value=2.7e-11 Score=109.06 Aligned_cols=103 Identities=5% Similarity=-0.042 Sum_probs=90.0
Q ss_pred HHHHHHHHHhHHHhhCCHHHHHHHHHHHhcCCCC---CCHHHHHHHHHHHHhcCChHHHHHHHHHHHhcCCCchHHHHHH
Q 014478 318 ETLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTM---VSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQ 394 (424)
Q Consensus 318 ~~~~~~~~g~~~~~~g~~~~A~~~~~~ai~~~p~---~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~ 394 (424)
....+...|..++..|++++|++.|+++++ .|. ....++.++|.+|..+|++++|+..++++++++|+++.+++++
T Consensus 36 ~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~-~~~~~~~~~~~~~~lg~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l 114 (272)
T 3u4t_A 36 SPYIYNRRAVCYYELAKYDLAQKDIETYFS-KVNATKAKSADFEYYGKILMKKGQDSLAIQQYQAAVDRDTTRLDMYGQI 114 (272)
T ss_dssp CSTTHHHHHHHHHHTTCHHHHHHHHHHHHT-TSCTTTCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCTHHHHHH
T ss_pred cHHHHHHHHHHHHHHhhHHHHHHHHHHHHh-ccCchhHHHHHHHHHHHHHHHcccHHHHHHHHHHHHhcCcccHHHHHHH
Confidence 344677888999999999999999999999 443 1245589999999999999999999999999999999999999
Q ss_pred HHHHHhCCChHHHHHHHHHHHhchhhc
Q 014478 395 AACLFSLGMENDARETLKDGTNLEAKK 421 (424)
Q Consensus 395 g~~~~~~~~~~~A~~~~~~al~l~~~~ 421 (424)
|.++..+|++++|+..|+++++++|.+
T Consensus 115 ~~~~~~~~~~~~A~~~~~~al~~~~~~ 141 (272)
T 3u4t_A 115 GSYFYNKGNFPLAIQYMEKQIRPTTTD 141 (272)
T ss_dssp HHHHHHTTCHHHHHHHHGGGCCSSCCC
T ss_pred HHHHHHccCHHHHHHHHHHHhhcCCCc
Confidence 999999999999999999999998764
|
| >3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus} | Back alignment and structure |
|---|
Probab=99.24 E-value=3.2e-11 Score=108.45 Aligned_cols=103 Identities=14% Similarity=0.059 Sum_probs=94.9
Q ss_pred HHHHHHHHhHHHhhCCHHHHHHHHHHHhcCCCCC--CHHHHHHHHHHHHh--------cCChHHHHHHHHHHHhcCCCch
Q 014478 319 TLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMV--SPTVYARRCLSYLM--------NDMPQEALGDAMQAQVVSPDWP 388 (424)
Q Consensus 319 ~~~~~~~g~~~~~~g~~~~A~~~~~~ai~~~p~~--~~~~~~~~~~~~~~--------~~~~~~A~~~~~~al~~~p~~~ 388 (424)
...+...|..+++.|+|++|+..|+++++..|++ ...+++++|.+|.. +|++++|+..++++++.+|++.
T Consensus 52 ~~a~~~lg~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~a~~~lg~~~~~~~~~~~~~~~~~~~A~~~~~~~l~~~p~~~ 131 (261)
T 3qky_A 52 ADAQFYLARAYYQNKEYLLAASEYERFIQIYQIDPRVPQAEYERAMCYYKLSPPYELDQTDTRKAIEAFQLFIDRYPNHE 131 (261)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTTHHHHHHHHHHHHHHHCCCTTSCCHHHHHHHHHHHHHHHHCTTCT
T ss_pred HHHHHHHHHHHHHhCcHHHHHHHHHHHHHHCCCCchhHHHHHHHHHHHHHhcccccccchhHHHHHHHHHHHHHHCcCch
Confidence 4567789999999999999999999999998851 36789999999999 9999999999999999999998
Q ss_pred HHH-----------------HHHHHHHHhCCChHHHHHHHHHHHhchhhc
Q 014478 389 TAL-----------------YLQAACLFSLGMENDARETLKDGTNLEAKK 421 (424)
Q Consensus 389 ~a~-----------------~~~g~~~~~~~~~~~A~~~~~~al~l~~~~ 421 (424)
.+. +.+|.+|..+|+|++|+..|+++++.+|+.
T Consensus 132 ~~~~a~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~l~~~p~~ 181 (261)
T 3qky_A 132 LVDDATQKIRELRAKLARKQYEAARLYERRELYEAAAVTYEAVFDAYPDT 181 (261)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTS
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHCCCC
Confidence 777 899999999999999999999999999874
|
| >2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A | Back alignment and structure |
|---|
Probab=99.23 E-value=1e-10 Score=104.06 Aligned_cols=101 Identities=10% Similarity=0.026 Sum_probs=67.4
Q ss_pred HHHHHHHHhHHHhhCCHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHh--cCCCchHHHHHHHH
Q 014478 319 TLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQV--VSPDWPTALYLQAA 396 (424)
Q Consensus 319 ~~~~~~~g~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~--~~p~~~~a~~~~g~ 396 (424)
...+...|..++..|++++|++.|.++++.+|. +..++.++|.+|...|++++|+..+++++. .+|.+..+++.+|.
T Consensus 71 ~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~-~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~la~ 149 (252)
T 2ho1_A 71 ADAHAALAVVFQTEMEPKLADEEYRKALASDSR-NARVLNNYGGFLYEQKRYEEAYQRLLEASQDTLYPERSRVFENLGL 149 (252)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHTTCTTCTTHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCcC-cHHHHHHHHHHHHHHhHHHHHHHHHHHHHhCccCcccHHHHHHHHH
Confidence 334555666666666677777777766666666 666666666666666666666666666666 66666666666666
Q ss_pred HHHhCCChHHHHHHHHHHHhchhh
Q 014478 397 CLFSLGMENDARETLKDGTNLEAK 420 (424)
Q Consensus 397 ~~~~~~~~~~A~~~~~~al~l~~~ 420 (424)
++..+|++++|+..|+++++++|.
T Consensus 150 ~~~~~g~~~~A~~~~~~~~~~~~~ 173 (252)
T 2ho1_A 150 VSLQMKKPAQAKEYFEKSLRLNRN 173 (252)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHCSC
T ss_pred HHHHcCCHHHHHHHHHHHHhcCcc
Confidence 666666666666666666666554
|
| >1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1 | Back alignment and structure |
|---|
Probab=99.23 E-value=6.1e-11 Score=112.90 Aligned_cols=101 Identities=15% Similarity=0.045 Sum_probs=90.8
Q ss_pred HHHHHHHhHHHhhCCHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhcCCCchHHHHHHHHHHH
Q 014478 320 LNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAACLF 399 (424)
Q Consensus 320 ~~~~~~g~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~ 399 (424)
..+...|..+.+.|++++|++.|+++++.+|. +..++.++|.++.+.|++++|+..++++++++|++..+++++|.++.
T Consensus 272 ~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~ 350 (388)
T 1w3b_A 272 DAYCNLANALKEKGSVAEAEDCYNTALRLCPT-HADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQ 350 (388)
T ss_dssp HHHHHHHHHHHHHSCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHTTTCHHHHHHHHHHHTTSCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHhhCcc-cHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCcHHHHHHHHHHHH
Confidence 35667888888999999999999999999998 88899999999999999999999999999999999999999999999
Q ss_pred hCCChHHHHHHHHHHHhchhhc
Q 014478 400 SLGMENDARETLKDGTNLEAKK 421 (424)
Q Consensus 400 ~~~~~~~A~~~~~~al~l~~~~ 421 (424)
.+|++++|+..|+++++++|+.
T Consensus 351 ~~g~~~~A~~~~~~a~~~~p~~ 372 (388)
T 1w3b_A 351 QQGKLQEALMHYKEAIRISPTF 372 (388)
T ss_dssp TTTCCHHHHHHHHHHHTTCTTC
T ss_pred HcCCHHHHHHHHHHHHhhCCCC
Confidence 9999999999999999998863
|
| >3mkr_A Coatomer subunit epsilon; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus} | Back alignment and structure |
|---|
Probab=99.23 E-value=4.4e-11 Score=109.65 Aligned_cols=92 Identities=12% Similarity=0.062 Sum_probs=86.4
Q ss_pred HHhhCCHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhcCCCchHHHHHHHHHHHhCCChHH-H
Q 014478 329 AFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAACLFSLGMEND-A 407 (424)
Q Consensus 329 ~~~~g~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~~~~~~~-A 407 (424)
+...|++++|+..|+++++.+|+ +..+++++|.++.++|++++|+..++++++++|+++++++++|.++..+|++++ |
T Consensus 176 ~~~~~~~~eA~~~~~~~l~~~p~-~~~~~~~la~~~~~~g~~~eA~~~l~~al~~~p~~~~~l~~l~~~~~~~g~~~eaa 254 (291)
T 3mkr_A 176 AAGGEKLQDAYYIFQEMADKCSP-TLLLLNGQAACHMAQGRWEAAEGVLQEALDKDSGHPETLINLVVLSQHLGKPPEVT 254 (291)
T ss_dssp HHCTTHHHHHHHHHHHHHHHSCC-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCCHHHH
T ss_pred HhCchHHHHHHHHHHHHHHhCCC-cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCCHHHH
Confidence 34568999999999999999999 999999999999999999999999999999999999999999999999999987 5
Q ss_pred HHHHHHHHhchhhc
Q 014478 408 RETLKDGTNLEAKK 421 (424)
Q Consensus 408 ~~~~~~al~l~~~~ 421 (424)
..+++++++++|+.
T Consensus 255 ~~~~~~~~~~~P~~ 268 (291)
T 3mkr_A 255 NRYLSQLKDAHRSH 268 (291)
T ss_dssp HHHHHHHHHHCTTC
T ss_pred HHHHHHHHHhCCCC
Confidence 68889999999974
|
| >2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis} | Back alignment and structure |
|---|
Probab=99.23 E-value=1.2e-10 Score=101.30 Aligned_cols=102 Identities=15% Similarity=0.000 Sum_probs=87.3
Q ss_pred HHHHHHHHhHHHhhCCHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHhc-CChHHHHHHHHHHHh--cCCCchHHHHHHH
Q 014478 319 TLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMN-DMPQEALGDAMQAQV--VSPDWPTALYLQA 395 (424)
Q Consensus 319 ~~~~~~~g~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~-~~~~~A~~~~~~al~--~~p~~~~a~~~~g 395 (424)
...+...|..+...|++++|++.|.++++.+|. +..++.++|.+|... |++++|+..++++++ .+|.+..+++.+|
T Consensus 42 ~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~-~~~~~~~l~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~l~ 120 (225)
T 2vq2_A 42 ELAWLVRAEIYQYLKVNDKAQESFRQALSIKPD-SAEINNNYGWFLCGRLNRPAESMAYFDKALADPTYPTPYIANLNKG 120 (225)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHTTTCCHHHHHHHHHHHHTSTTCSCHHHHHHHHH
T ss_pred hHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCC-ChHHHHHHHHHHHHhcCcHHHHHHHHHHHHcCcCCcchHHHHHHHH
Confidence 446667788888888999999999999888888 888888888888888 899999999999888 6777788888889
Q ss_pred HHHHhCCChHHHHHHHHHHHhchhhc
Q 014478 396 ACLFSLGMENDARETLKDGTNLEAKK 421 (424)
Q Consensus 396 ~~~~~~~~~~~A~~~~~~al~l~~~~ 421 (424)
.++..+|++++|+..|+++++.+|.+
T Consensus 121 ~~~~~~~~~~~A~~~~~~~~~~~~~~ 146 (225)
T 2vq2_A 121 ICSAKQGQFGLAEAYLKRSLAAQPQF 146 (225)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHSTTC
T ss_pred HHHHHcCCHHHHHHHHHHHHHhCCCC
Confidence 99999999999999999888887753
|
| >1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A | Back alignment and structure |
|---|
Probab=99.22 E-value=5.3e-11 Score=111.43 Aligned_cols=98 Identities=13% Similarity=0.066 Sum_probs=92.0
Q ss_pred HHHHHHHHhHHHhhCCHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhcCCCchHHHHHHHHHH
Q 014478 319 TLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAACL 398 (424)
Q Consensus 319 ~~~~~~~g~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~ 398 (424)
+..+...|..+++.|+|++|++.|+++++++|+ +..+++++|.+|..+|++++|+..|++|++++|++..+++++|.++
T Consensus 196 ~~~~~nla~~~~~~g~~~~A~~~~~~al~~~p~-~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~~~a~~~l~~~~ 274 (336)
T 1p5q_A 196 LASHLNLAMCHLKLQAFSAAIESCNKALELDSN-NEKGLSRRGEAHLAVNDFELARADFQKVLQLYPNNKAAKTQLAVCQ 274 (336)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSSCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-cHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
Confidence 457778999999999999999999999999999 9999999999999999999999999999999999999999999999
Q ss_pred HhCCChHHH-HHHHHHHHhc
Q 014478 399 FSLGMENDA-RETLKDGTNL 417 (424)
Q Consensus 399 ~~~~~~~~A-~~~~~~al~l 417 (424)
..+|++++| ...|+++++.
T Consensus 275 ~~~~~~~~a~~~~~~~~~~~ 294 (336)
T 1p5q_A 275 QRIRRQLAREKKLYANMFER 294 (336)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 999999999 5677777654
|
| >3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii} | Back alignment and structure |
|---|
Probab=99.22 E-value=4.9e-11 Score=107.37 Aligned_cols=97 Identities=13% Similarity=0.075 Sum_probs=49.4
Q ss_pred HHHHhHHHhhCCHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhcCCCchHHHHHHHHHHHhCC
Q 014478 323 KKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAACLFSLG 402 (424)
Q Consensus 323 ~~~g~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~~~ 402 (424)
...|..+...|++++|++.|.++++.+|. +..++.++|.+|..+|++++|+..++++++++|+++.+++++|...+..+
T Consensus 78 ~~lg~~~~~~~~~~~A~~~~~~a~~~~~~-~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~~ 156 (272)
T 3u4t_A 78 EYYGKILMKKGQDSLAIQQYQAAVDRDTT-RLDMYGQIGSYFYNKGNFPLAIQYMEKQIRPTTTDPKVFYELGQAYYYNK 156 (272)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHSTT-CTHHHHHHHHHHHHTTCHHHHHHHHGGGCCSSCCCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHcccHHHHHHHHHHHHhcCcc-cHHHHHHHHHHHHHccCHHHHHHHHHHHhhcCCCcHHHHHHHHHHHHHHH
Confidence 34455555555555555555555555555 44555555555555555555555555555555555555555552222233
Q ss_pred ChHHHHHHHHHHHhchhh
Q 014478 403 MENDARETLKDGTNLEAK 420 (424)
Q Consensus 403 ~~~~A~~~~~~al~l~~~ 420 (424)
++++|+..|+++++++|.
T Consensus 157 ~~~~A~~~~~~a~~~~p~ 174 (272)
T 3u4t_A 157 EYVKADSSFVKVLELKPN 174 (272)
T ss_dssp CHHHHHHHHHHHHHHSTT
T ss_pred HHHHHHHHHHHHHHhCcc
Confidence 555555555555555443
|
| >3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.22 E-value=1.1e-10 Score=109.10 Aligned_cols=101 Identities=15% Similarity=0.189 Sum_probs=93.9
Q ss_pred HHHHHHHhHHHhhCCHHHHHHHHHHHhcCCCCCCH----HHHHHHHHHHHhcCChHHHHHHHHHHHhcCCCchHHHHHHH
Q 014478 320 LNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSP----TVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQA 395 (424)
Q Consensus 320 ~~~~~~g~~~~~~g~~~~A~~~~~~ai~~~p~~~~----~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g 395 (424)
......|..+++.|++++|++.|+++++.+|+ +. .++.++|.+|..+|++++|+..++++++++|+++.+++.+|
T Consensus 235 ~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~ 313 (359)
T 3ieg_A 235 NKLIESAEELIRDGRYTDATSKYESVMKTEPS-VAEYTVRSKERICHCFSKDEKPVEAIRICSEVLQMEPDNVNALKDRA 313 (359)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCS-SHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCC-chHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCcccHHHHHHHH
Confidence 34556799999999999999999999999998 76 44678999999999999999999999999999999999999
Q ss_pred HHHHhCCChHHHHHHHHHHHhchhhc
Q 014478 396 ACLFSLGMENDARETLKDGTNLEAKK 421 (424)
Q Consensus 396 ~~~~~~~~~~~A~~~~~~al~l~~~~ 421 (424)
.++..+|++++|+..|+++++++|++
T Consensus 314 ~~~~~~g~~~~A~~~~~~a~~~~p~~ 339 (359)
T 3ieg_A 314 EAYLIEEMYDEAIQDYEAAQEHNEND 339 (359)
T ss_dssp HHHHHTTCHHHHHHHHHHHHTTCTTC
T ss_pred HHHHHcCCHHHHHHHHHHHHhcCCCC
Confidence 99999999999999999999999974
|
| >1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1 | Back alignment and structure |
|---|
Probab=99.22 E-value=4.7e-11 Score=109.45 Aligned_cols=104 Identities=14% Similarity=0.069 Sum_probs=90.3
Q ss_pred HHHHHHHHHhHHHhh-CCHHHHHHHHHHHhcCCCCCC-----HHHHHHHHHHHHhcCChHHHHHHHHHHHhcCCCchH--
Q 014478 318 ETLNSKKHGDTAFRA-KDFSTAIDCYTQFIDGGTMVS-----PTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPT-- 389 (424)
Q Consensus 318 ~~~~~~~~g~~~~~~-g~~~~A~~~~~~ai~~~p~~~-----~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~-- 389 (424)
.+..+...|..+... |++++|++.|++|+++.|... ..++.++|.+|..+|++++|+..|++++++.|++..
T Consensus 116 ~a~~~~~lg~~~~~~lg~~~~A~~~~~~Al~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~ 195 (292)
T 1qqe_A 116 GANFKFELGEILENDLHDYAKAIDCYELAGEWYAQDQSVALSNKCFIKCADLKALDGQYIEASDIYSKLIKSSMGNRLSQ 195 (292)
T ss_dssp HHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTSSCTTTG
T ss_pred HHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhcCCccc
Confidence 355677889999996 999999999999999988621 467999999999999999999999999999998754
Q ss_pred -----HHHHHHHHHHhCCChHHHHHHHHHHHhchhhc
Q 014478 390 -----ALYLQAACLFSLGMENDARETLKDGTNLEAKK 421 (424)
Q Consensus 390 -----a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~ 421 (424)
+++++|.++..+|++++|+.+|+++++++|..
T Consensus 196 ~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~ 232 (292)
T 1qqe_A 196 WSLKDYFLKKGLCQLAATDAVAAARTLQEGQSEDPNF 232 (292)
T ss_dssp GGHHHHHHHHHHHHHHTTCHHHHHHHHHGGGCC----
T ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCC
Confidence 68999999999999999999999999999963
|
| >2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A | Back alignment and structure |
|---|
Probab=99.21 E-value=8.3e-11 Score=104.63 Aligned_cols=102 Identities=12% Similarity=0.012 Sum_probs=96.5
Q ss_pred HHHHHHHHHhHHHhhCCHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhcCCCchHHHHHHHHH
Q 014478 318 ETLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAAC 397 (424)
Q Consensus 318 ~~~~~~~~g~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~ 397 (424)
.+..+...|..++..|++++|++.|+++++.+|. +..++..+|.+|...|++++|+..++++++++|++..+++.+|.+
T Consensus 36 ~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~~~-~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~ 114 (252)
T 2ho1_A 36 ARDAYIQLGLGYLQRGNTEQAKVPLRKALEIDPS-SADAHAALAVVFQTEMEPKLADEEYRKALASDSRNARVLNNYGGF 114 (252)
T ss_dssp HHHHHHHHHHHHHHTTCTGGGHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCChHHHHHHHHHHHhcCCC-hHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCcCcHHHHHHHHHH
Confidence 3567788999999999999999999999999999 999999999999999999999999999999999999999999999
Q ss_pred HHhCCChHHHHHHHHHHHh--chhh
Q 014478 398 LFSLGMENDARETLKDGTN--LEAK 420 (424)
Q Consensus 398 ~~~~~~~~~A~~~~~~al~--l~~~ 420 (424)
+..+|++++|+..|+++++ .+|.
T Consensus 115 ~~~~g~~~~A~~~~~~~~~~~~~~~ 139 (252)
T 2ho1_A 115 LYEQKRYEEAYQRLLEASQDTLYPE 139 (252)
T ss_dssp HHHTTCHHHHHHHHHHHTTCTTCTT
T ss_pred HHHHhHHHHHHHHHHHHHhCccCcc
Confidence 9999999999999999998 5553
|
| >1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1 | Back alignment and structure |
|---|
Probab=99.21 E-value=1e-10 Score=111.29 Aligned_cols=102 Identities=15% Similarity=0.052 Sum_probs=96.2
Q ss_pred HHHHHHHHhHHHhhCCHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhcCCCchHHHHHHHHHH
Q 014478 319 TLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAACL 398 (424)
Q Consensus 319 ~~~~~~~g~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~ 398 (424)
...+...|..++..|++++|++.|+++++.+|+ +..++.++|.+|.+.|++++|+..++++++++|+++.+++++|.++
T Consensus 237 ~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~ 315 (388)
T 1w3b_A 237 AVVHGNLACVYYEQGLIDLAIDTYRRAIELQPH-FPDAYCNLANALKEKGSVAEAEDCYNTALRLCPTHADSLNNLANIK 315 (388)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHTCSS-CHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCcccHHHHHHHHHHH
Confidence 445667899999999999999999999999999 9999999999999999999999999999999999999999999999
Q ss_pred HhCCChHHHHHHHHHHHhchhhc
Q 014478 399 FSLGMENDARETLKDGTNLEAKK 421 (424)
Q Consensus 399 ~~~~~~~~A~~~~~~al~l~~~~ 421 (424)
..+|++++|+..|+++++++|..
T Consensus 316 ~~~g~~~~A~~~~~~al~~~p~~ 338 (388)
T 1w3b_A 316 REQGNIEEAVRLYRKALEVFPEF 338 (388)
T ss_dssp HTTTCHHHHHHHHHHHTTSCTTC
T ss_pred HHcCCHHHHHHHHHHHHhcCCCc
Confidence 99999999999999999998863
|
| >2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A | Back alignment and structure |
|---|
Probab=99.21 E-value=2e-11 Score=99.10 Aligned_cols=81 Identities=10% Similarity=-0.026 Sum_probs=75.2
Q ss_pred HHHHHHhcCCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhcCCCchHHHHHHHHHHHhCCChHHHHHHHHHHHhchh
Q 014478 340 DCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAACLFSLGMENDARETLKDGTNLEA 419 (424)
Q Consensus 340 ~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~ 419 (424)
..|.++++.+|+ +...++++|.++...|++++|+..|++++.++|+++.+|+++|.++..+|++++|+..|+++++++|
T Consensus 5 ~~l~~al~~~p~-~~~~~~~~a~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p 83 (142)
T 2xcb_A 5 GTLAMLRGLSED-TLEQLYALGFNQYQAGKWDDAQKIFQALCMLDHYDARYFLGLGACRQSLGLYEQALQSYSYGALMDI 83 (142)
T ss_dssp ----CCTTCCHH-HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT
T ss_pred hhHHHHHcCCHH-HHHHHHHHHHHHHHHccHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCC
Confidence 578899999999 9999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hc
Q 014478 420 KK 421 (424)
Q Consensus 420 ~~ 421 (424)
.+
T Consensus 84 ~~ 85 (142)
T 2xcb_A 84 NE 85 (142)
T ss_dssp TC
T ss_pred CC
Confidence 75
|
| >3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A | Back alignment and structure |
|---|
Probab=99.20 E-value=1.4e-10 Score=107.06 Aligned_cols=103 Identities=12% Similarity=0.027 Sum_probs=98.2
Q ss_pred HHHHHHHHHhHHHhhCCHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhcCCCchHHHHHHHHH
Q 014478 318 ETLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAAC 397 (424)
Q Consensus 318 ~~~~~~~~g~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~ 397 (424)
....+...|..++..|++++|++.|+++++.+|+ +..++..+|.++...|++++|+..++++++++|++..+++.+|.+
T Consensus 20 ~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~ 98 (327)
T 3cv0_A 20 YHENPMEEGLSMLKLANLAEAALAFEAVCQAAPE-REEAWRSLGLTQAENEKDGLAIIALNHARMLDPKDIAVHAALAVS 98 (327)
T ss_dssp GSSCHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCcCCHHHHHHHHHH
Confidence 3456778999999999999999999999999999 999999999999999999999999999999999999999999999
Q ss_pred HHhCCChHHHHHHHHHHHhchhhc
Q 014478 398 LFSLGMENDARETLKDGTNLEAKK 421 (424)
Q Consensus 398 ~~~~~~~~~A~~~~~~al~l~~~~ 421 (424)
+..+|++++|+..|+++++++|..
T Consensus 99 ~~~~~~~~~A~~~~~~~~~~~~~~ 122 (327)
T 3cv0_A 99 HTNEHNANAALASLRAWLLSQPQY 122 (327)
T ss_dssp HHHTTCHHHHHHHHHHHHHTSTTT
T ss_pred HHHcCCHHHHHHHHHHHHHhCCcc
Confidence 999999999999999999998874
|
| >2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A* | Back alignment and structure |
|---|
Probab=99.20 E-value=1.1e-10 Score=117.42 Aligned_cols=102 Identities=15% Similarity=0.032 Sum_probs=98.2
Q ss_pred HHHHHHHHhHHHhhCCHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhcCCCchHHHHHHHHHH
Q 014478 319 TLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAACL 398 (424)
Q Consensus 319 ~~~~~~~g~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~ 398 (424)
+..+...|..++..|++++|++.|+++++++|+ +..++.++|.+|..+|++++|+..++++++++|++..+++++|.+|
T Consensus 23 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~ 101 (568)
T 2vsy_A 23 FVAWLMLADAELGMGDTTAGEMAVQRGLALHPG-HPEAVARLGRVRWTQQRHAEAAVLLQQASDAAPEHPGIALWLGHAL 101 (568)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHTTSTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHH
Confidence 456778999999999999999999999999999 9999999999999999999999999999999999999999999999
Q ss_pred HhCCChHHHHHHHHHHHhchhhc
Q 014478 399 FSLGMENDARETLKDGTNLEAKK 421 (424)
Q Consensus 399 ~~~~~~~~A~~~~~~al~l~~~~ 421 (424)
..+|++++|++.|+++++++|++
T Consensus 102 ~~~g~~~~A~~~~~~al~~~p~~ 124 (568)
T 2vsy_A 102 EDAGQAEAAAAAYTRAHQLLPEE 124 (568)
T ss_dssp HHTTCHHHHHHHHHHHHHHCTTC
T ss_pred HHcCCHHHHHHHHHHHHHhCCCC
Confidence 99999999999999999999864
|
| >3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A | Back alignment and structure |
|---|
Probab=99.20 E-value=1.5e-10 Score=106.89 Aligned_cols=101 Identities=13% Similarity=0.132 Sum_probs=97.2
Q ss_pred HHHHHHHHhHHHhhCCHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhcCCCchHHHHHHHHHH
Q 014478 319 TLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAACL 398 (424)
Q Consensus 319 ~~~~~~~g~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~ 398 (424)
...+...|..+...|++++|++.|.++++.+|+ +..++.++|.+|...|++++|+..++++++++|++..+++.+|.++
T Consensus 172 ~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~ 250 (327)
T 3cv0_A 172 AQLHASLGVLYNLSNNYDSAAANLRRAVELRPD-DAQLWNKLGATLANGNRPQEALDAYNRALDINPGYVRVMYNMAVSY 250 (327)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCC-cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHH
Confidence 456778899999999999999999999999999 9999999999999999999999999999999999999999999999
Q ss_pred HhCCChHHHHHHHHHHHhchhh
Q 014478 399 FSLGMENDARETLKDGTNLEAK 420 (424)
Q Consensus 399 ~~~~~~~~A~~~~~~al~l~~~ 420 (424)
..+|++++|+..|+++++++|.
T Consensus 251 ~~~g~~~~A~~~~~~a~~~~~~ 272 (327)
T 3cv0_A 251 SNMSQYDLAAKQLVRAIYMQVG 272 (327)
T ss_dssp HHTTCHHHHHHHHHHHHHHHTT
T ss_pred HHhccHHHHHHHHHHHHHhCCc
Confidence 9999999999999999999987
|
| >2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis} | Back alignment and structure |
|---|
Probab=99.18 E-value=2.3e-10 Score=99.44 Aligned_cols=101 Identities=10% Similarity=-0.018 Sum_probs=95.1
Q ss_pred HHHHHHHHHhHHHhh-CCHHHHHHHHHHHhc--CCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhcCCCchHHHHHH
Q 014478 318 ETLNSKKHGDTAFRA-KDFSTAIDCYTQFID--GGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQ 394 (424)
Q Consensus 318 ~~~~~~~~g~~~~~~-g~~~~A~~~~~~ai~--~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~ 394 (424)
....+...|..++.. |++++|++.|+++++ ..|. ...++.++|.++...|++++|+..++++++.+|++..+++.+
T Consensus 75 ~~~~~~~l~~~~~~~~~~~~~A~~~~~~~~~~~~~~~-~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l 153 (225)
T 2vq2_A 75 SAEINNNYGWFLCGRLNRPAESMAYFDKALADPTYPT-PYIANLNKGICSAKQGQFGLAEAYLKRSLAAQPQFPPAFKEL 153 (225)
T ss_dssp CHHHHHHHHHHHHTTTCCHHHHHHHHHHHHTSTTCSC-HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHH
T ss_pred ChHHHHHHHHHHHHhcCcHHHHHHHHHHHHcCcCCcc-hHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCchHHHHH
Confidence 345677889999999 999999999999999 6666 789999999999999999999999999999999999999999
Q ss_pred HHHHHhCCChHHHHHHHHHHHhchh
Q 014478 395 AACLFSLGMENDARETLKDGTNLEA 419 (424)
Q Consensus 395 g~~~~~~~~~~~A~~~~~~al~l~~ 419 (424)
|.++..+|++++|+..|+++++++|
T Consensus 154 a~~~~~~~~~~~A~~~~~~~~~~~~ 178 (225)
T 2vq2_A 154 ARTKMLAGQLGDADYYFKKYQSRVE 178 (225)
T ss_dssp HHHHHHHTCHHHHHHHHHHHHHHHC
T ss_pred HHHHHHcCCHHHHHHHHHHHHHhCC
Confidence 9999999999999999999999988
|
| >1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A | Back alignment and structure |
|---|
Probab=99.18 E-value=1.4e-10 Score=95.84 Aligned_cols=101 Identities=15% Similarity=0.014 Sum_probs=91.5
Q ss_pred HHHHHHHHhHHHhhCCHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhcCCCchHHHHHHHH--
Q 014478 319 TLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAA-- 396 (424)
Q Consensus 319 ~~~~~~~g~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~-- 396 (424)
...+...|..++..|++++|++.|.++++.+|. +..++.++|.++..+|++++|+..++++++++|++..++..++.
T Consensus 47 ~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~-~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~~~~~~~~ 125 (166)
T 1a17_A 47 AIYYGNRSLAYLRTECYGYALGDATRAIELDKK-YIKGYYRRAASNMALGKFRAALRDYETVVKVKPHDKDAKMKYQECN 125 (166)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcc-cHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Confidence 456778899999999999999999999999999 99999999999999999999999999999999999999955554
Q ss_pred HHHhCCChHHHHHHHHHHHhchhh
Q 014478 397 CLFSLGMENDARETLKDGTNLEAK 420 (424)
Q Consensus 397 ~~~~~~~~~~A~~~~~~al~l~~~ 420 (424)
.+..+|++++|+..+.++..+-+.
T Consensus 126 ~~~~~~~~~~A~~~~~~~~~~~~~ 149 (166)
T 1a17_A 126 KIVKQKAFERAIAGDEHKRSVVDS 149 (166)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcccchHHHhcc
Confidence 488999999999999998776543
|
| >1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1 | Back alignment and structure |
|---|
Probab=99.18 E-value=7.2e-11 Score=108.22 Aligned_cols=104 Identities=9% Similarity=-0.188 Sum_probs=93.3
Q ss_pred HHHHHHHHHhHHHhhCCHHHHHHHHHHHhcCCCCC-----CHHHHHHHHHHHHhc-CChHHHHHHHHHHHhcCCCc----
Q 014478 318 ETLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMV-----SPTVYARRCLSYLMN-DMPQEALGDAMQAQVVSPDW---- 387 (424)
Q Consensus 318 ~~~~~~~~g~~~~~~g~~~~A~~~~~~ai~~~p~~-----~~~~~~~~~~~~~~~-~~~~~A~~~~~~al~~~p~~---- 387 (424)
.+..+...|..+...|++++|+.+|++|+++.|.. ...++.++|.+|... |++++|+..|++|+++.|++
T Consensus 76 ~a~~~~~lg~~~~~~g~~~~A~~~~~~Al~l~~~~g~~~~~a~~~~~lg~~~~~~lg~~~~A~~~~~~Al~~~~~~~~~~ 155 (292)
T 1qqe_A 76 AGNTYVEAYKCFKSGGNSVNAVDSLENAIQIFTHRGQFRRGANFKFELGEILENDLHDYAKAIDCYELAGEWYAQDQSVA 155 (292)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTCHH
T ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHhCCChH
Confidence 45677889999999999999999999999987751 146899999999996 99999999999999998865
Q ss_pred --hHHHHHHHHHHHhCCChHHHHHHHHHHHhchhhc
Q 014478 388 --PTALYLQAACLFSLGMENDARETLKDGTNLEAKK 421 (424)
Q Consensus 388 --~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~ 421 (424)
..++.++|.++..+|+|++|+..|+++++++|..
T Consensus 156 ~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~ 191 (292)
T 1qqe_A 156 LSNKCFIKCADLKALDGQYIEASDIYSKLIKSSMGN 191 (292)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTSSC
T ss_pred HHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhcC
Confidence 5789999999999999999999999999998864
|
| >2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A | Back alignment and structure |
|---|
Probab=99.17 E-value=2.7e-10 Score=110.44 Aligned_cols=100 Identities=15% Similarity=0.202 Sum_probs=94.1
Q ss_pred HHHHHHhHHHhhCCHHHHHHHHHHHhcCCCCCCH----HHHHHHHHHHHhcCChHHHHHHHHHHHhcCCCchHHHHHHHH
Q 014478 321 NSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSP----TVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAA 396 (424)
Q Consensus 321 ~~~~~g~~~~~~g~~~~A~~~~~~ai~~~p~~~~----~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~ 396 (424)
.....|..++..|++++|++.|+++++.+|+ +. .++.++|.++.++|++++|+..++++++++|+++.+|+.+|.
T Consensus 259 ~~~~~~~~~~~~g~~~~A~~~~~~~l~~~p~-~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~p~~~~~~~~l~~ 337 (450)
T 2y4t_A 259 KLIESAEELIRDGRYTDATSKYESVMKTEPS-IAEYTVRSKERICHCFSKDEKPVEAIRVCSEVLQMEPDNVNALKDRAE 337 (450)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHHCCS-SHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHhcCCc-chHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCcccHHHHHHHHH
Confidence 4456699999999999999999999999998 74 488999999999999999999999999999999999999999
Q ss_pred HHHhCCChHHHHHHHHHHHhchhhc
Q 014478 397 CLFSLGMENDARETLKDGTNLEAKK 421 (424)
Q Consensus 397 ~~~~~~~~~~A~~~~~~al~l~~~~ 421 (424)
++..+|++++|+..|+++++++|++
T Consensus 338 ~~~~~~~~~~A~~~~~~al~~~p~~ 362 (450)
T 2y4t_A 338 AYLIEEMYDEAIQDYETAQEHNEND 362 (450)
T ss_dssp HHHHTTCHHHHHHHHHHHHTTSSSC
T ss_pred HHHHhcCHHHHHHHHHHHHHhCcch
Confidence 9999999999999999999999974
|
| >3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.17 E-value=8.8e-11 Score=108.51 Aligned_cols=102 Identities=15% Similarity=0.065 Sum_probs=95.7
Q ss_pred HHHHHHHHhHHHhhCCHHHHHHHHHHHhcCC---------CCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhcCCCchH
Q 014478 319 TLNSKKHGDTAFRAKDFSTAIDCYTQFIDGG---------TMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPT 389 (424)
Q Consensus 319 ~~~~~~~g~~~~~~g~~~~A~~~~~~ai~~~---------p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~ 389 (424)
...+...|..++..|++++|++.|+++++.. |. ...++.++|.+|..+|++++|+..++++++++|+++.
T Consensus 193 ~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~-~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~ 271 (330)
T 3hym_B 193 PFVMHEVGVVAFQNGEWKTAEKWFLDALEKIKAIGNEVTVDK-WEPLLNNLGHVCRKLKKYAEALDYHRQALVLIPQNAS 271 (330)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTTSCSCTTTT-CCHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCSH
T ss_pred hHHHHHHHHHHHHcccHHHHHHHHHHHHHHhhhccccccccH-HHHHHHHHHHHHHHhcCHHHHHHHHHHHHhhCccchH
Confidence 4567788999999999999999999999986 55 6789999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhCCChHHHHHHHHHHHhchhhc
Q 014478 390 ALYLQAACLFSLGMENDARETLKDGTNLEAKK 421 (424)
Q Consensus 390 a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~ 421 (424)
+++++|.++..+|++++|+..|+++++++|.+
T Consensus 272 ~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~ 303 (330)
T 3hym_B 272 TYSAIGYIHSLMGNFENAVDYFHTALGLRRDD 303 (330)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHTTTTTCSCC
T ss_pred HHHHHHHHHHHhccHHHHHHHHHHHHccCCCc
Confidence 99999999999999999999999999999864
|
| >2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A | Back alignment and structure |
|---|
Probab=99.16 E-value=1e-10 Score=102.73 Aligned_cols=101 Identities=14% Similarity=0.045 Sum_probs=90.6
Q ss_pred HHHHHHHhHHHhhCCHHHHHHHHHHHhcCCCCCCH---HHHHHHHHHHHh------------------cCChHHHHHHHH
Q 014478 320 LNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSP---TVYARRCLSYLM------------------NDMPQEALGDAM 378 (424)
Q Consensus 320 ~~~~~~g~~~~~~g~~~~A~~~~~~ai~~~p~~~~---~~~~~~~~~~~~------------------~~~~~~A~~~~~ 378 (424)
..+...|..+++.|+|++|++.|+++++.+|+ +. .+++++|.+|.. +|++++|+..|+
T Consensus 42 ~a~~~lg~~~~~~~~~~~A~~~~~~~l~~~P~-~~~~~~a~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~ 120 (225)
T 2yhc_A 42 QVQLDLIYAYYKNADLPLAQAAIDRFIRLNPT-HPNIDYVMYMRGLTNMALDDSALQGFFGVDRSDRDPQQARAAFSDFS 120 (225)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CTTHHHHHHHHHHHHHHHHC--------------CCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHHHHCcC-CCcHHHHHHHHHHHHHhhhhhhhhhhhccchhhcCcHHHHHHHHHHH
Confidence 46677899999999999999999999999998 54 478999999876 578999999999
Q ss_pred HHHhcCCCchHHH-----------------HHHHHHHHhCCChHHHHHHHHHHHhchhhc
Q 014478 379 QAQVVSPDWPTAL-----------------YLQAACLFSLGMENDARETLKDGTNLEAKK 421 (424)
Q Consensus 379 ~al~~~p~~~~a~-----------------~~~g~~~~~~~~~~~A~~~~~~al~l~~~~ 421 (424)
++++.+|++..++ +.+|.+|..+|++++|+..|+++++.+|+.
T Consensus 121 ~~l~~~P~~~~a~~a~~~l~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~l~~~p~~ 180 (225)
T 2yhc_A 121 KLVRGYPNSQYTTDATKRLVFLKDRLAKYEYSVAEYYTERGAWVAVVNRVEGMLRDYPDT 180 (225)
T ss_dssp HHHTTCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTS
T ss_pred HHHHHCcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHCcCC
Confidence 9999999998765 678999999999999999999999998864
|
| >3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.16 E-value=2.6e-10 Score=105.35 Aligned_cols=102 Identities=14% Similarity=-0.015 Sum_probs=92.1
Q ss_pred HHHHHHHHHhHHHhhCCHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhcCCCchHHHHHHHHH
Q 014478 318 ETLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAAC 397 (424)
Q Consensus 318 ~~~~~~~~g~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~ 397 (424)
....+...|..+...|++++|++.|.++++..|+ +...+.++|.+|...|++++|+..++++++++|+++.+++.+|.+
T Consensus 124 ~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~-~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~l~~~ 202 (330)
T 3hym_B 124 YGPAWIAYGHSFAVESEHDQAMAAYFTAAQLMKG-CHLPMLYIGLEYGLTNNSKLAERFFSQALSIAPEDPFVMHEVGVV 202 (330)
T ss_dssp CTHHHHHHHHHHHHHTCHHHHHHHHHHHHHHTTT-CSHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTTCHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHccCHHHHHHHHHHHHHhccc-cHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhCCCChHHHHHHHHH
Confidence 3456778899999999999999999999999998 888888899999999999999999999999999999999999999
Q ss_pred HHhCCChHHHHHHHHHHHhchhh
Q 014478 398 LFSLGMENDARETLKDGTNLEAK 420 (424)
Q Consensus 398 ~~~~~~~~~A~~~~~~al~l~~~ 420 (424)
+..+|++++|+..|++++++.++
T Consensus 203 ~~~~~~~~~A~~~~~~a~~~~~~ 225 (330)
T 3hym_B 203 AFQNGEWKTAEKWFLDALEKIKA 225 (330)
T ss_dssp HHHTTCHHHHHHHHHHHHHHHTT
T ss_pred HHHcccHHHHHHHHHHHHHHhhh
Confidence 99999999999999999988765
|
| >1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1 | Back alignment and structure |
|---|
Probab=99.15 E-value=3.5e-10 Score=101.74 Aligned_cols=101 Identities=14% Similarity=0.106 Sum_probs=78.9
Q ss_pred HHHHHHHhHHHhhCCHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhcCCCch-----------
Q 014478 320 LNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWP----------- 388 (424)
Q Consensus 320 ~~~~~~g~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~----------- 388 (424)
..+...|..++..|++++|++.|.++++.+|+ +..++.++|.+|..+|++++|+..++++++++|++.
T Consensus 78 ~~~~~la~~~~~~~~~~~A~~~~~~al~~~~~-~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~ 156 (275)
T 1xnf_A 78 EVFNYLGIYLTQAGNFDAAYEAFDSVLELDPT-YNYAHLNRGIALYYGGRDKLAQDDLLAFYQDDPNDPFRSLWLYLAEQ 156 (275)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHccCHHHHHHHHHHHHhcCcc-ccHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCChHHHHHHHHHHH
Confidence 34556777777788888888888888888887 777788888888888888888888888877777764
Q ss_pred -----------------------------------------------------------HHHHHHHHHHHhCCChHHHHH
Q 014478 389 -----------------------------------------------------------TALYLQAACLFSLGMENDARE 409 (424)
Q Consensus 389 -----------------------------------------------------------~a~~~~g~~~~~~~~~~~A~~ 409 (424)
.+++.+|.++..+|++++|+.
T Consensus 157 ~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~ 236 (275)
T 1xnf_A 157 KLDEKQAKEVLKQHFEKSDKEQWGWNIVEFYLGNISEQTLMERLKADATDNTSLAEHLSETNFYLGKYYLSLGDLDSATA 236 (275)
T ss_dssp HHCHHHHHHHHHHHHHHSCCCSTHHHHHHHHTTSSCHHHHHHHHHHHCCSHHHHHHHHHHHHHHHHHHHHHTTCHHHHHH
T ss_pred hcCHHHHHHHHHHHHhcCCcchHHHHHHHHHHHhcCHHHHHHHHHHHhcccccccccccHHHHHHHHHHHHcCCHHHHHH
Confidence 667778888888888888888
Q ss_pred HHHHHHhchhhc
Q 014478 410 TLKDGTNLEAKK 421 (424)
Q Consensus 410 ~~~~al~l~~~~ 421 (424)
.|+++++++|.+
T Consensus 237 ~~~~al~~~p~~ 248 (275)
T 1xnf_A 237 LFKLAVANNVHN 248 (275)
T ss_dssp HHHHHHTTCCTT
T ss_pred HHHHHHhCCchh
Confidence 888888888753
|
| >3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134} | Back alignment and structure |
|---|
Probab=99.14 E-value=1.4e-10 Score=109.64 Aligned_cols=132 Identities=12% Similarity=0.108 Sum_probs=96.4
Q ss_pred CCCcccceeeeecceecccccC--CCc--hhhhHHHHHHHHHhcCC--CcCcceeEEEEEeC---CeeeEEEecCCCCCH
Q 014478 2 GGRCSKFSICWFHCHLKSSVLE--SSD--LGETLNLEEAKAVGNLR--SERLANLIGCCYEA---DERLLVAEFMPNETL 72 (424)
Q Consensus 2 G~~g~v~~~~~~~~~v~~~~~~--~~~--~~~~~~~~E~~~l~~l~--h~~iv~~~~~~~~~---~~~~lv~e~~~~gsL 72 (424)
|.++.||.....+..+.+++.. ... .....+.+|+.+++.|. +.++++++.++.+. +..++||||++|.++
T Consensus 49 G~sn~~y~v~~~~~~~vlr~~~~p~~~~~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~~~~vme~v~G~~l 128 (359)
T 3dxp_A 49 GQSNPTFKLVTPGQTYVMRAKPGPKSKLLPSAHAIEREYRVMDALAGTDVPVAKMYALCEDESVIGRAFYIMEFVSGRVL 128 (359)
T ss_dssp -CCSCEEEEECSSCEEEEECCCC----------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSSCEEEEECCCCBCC
T ss_pred cccceEEEEEECCceEEEEeCCCCCCCCCCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCCeEEEEEecCCeec
Confidence 4456677666545444444443 221 22457888999999996 45689999998876 347899999999888
Q ss_pred HhHhccCCCCCCCHHHHHHHHHHHHHHHHHHHh-----------------------------------------------
Q 014478 73 AKHLFHWETQPMKWAMRLRVALYLAQALEYCSS----------------------------------------------- 105 (424)
Q Consensus 73 ~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~----------------------------------------------- 105 (424)
.+.. -..++..+...++.+++..|..||.
T Consensus 129 ~~~~----~~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 204 (359)
T 3dxp_A 129 WDQS----LPGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYKLSETESIPAMDSLMDWL 204 (359)
T ss_dssp CCTT----CTTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHHHHHHCCSCCHHHHHHHHHG
T ss_pred CCCc----cccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHHHHHHhcCCcCChHHHHHHHHH
Confidence 5422 2347888899999999999999997
Q ss_pred -----------CCCcccccCCCCCeeecCCCC--eEEccccccccC
Q 014478 106 -----------KGRALYHDLNAYRILFDKDGN--PRLSSFGLMKNS 138 (424)
Q Consensus 106 -----------~~~ivH~dikp~Nill~~~~~--~kl~Dfg~~~~~ 138 (424)
.. ++|+|++|.||+++.++. +.|+||+.+...
T Consensus 205 ~~~~~~~~~~~~~-lvHgD~~~~Nil~~~~~~~v~~viDwe~a~~g 249 (359)
T 3dxp_A 205 PQHIPQEDADLTS-IVHGDYRLDNLMFHPTEPRVLAVLDWELSTLG 249 (359)
T ss_dssp GGCCCSTTSSCCE-EECSSCSGGGEEECSSSSCEEEECCCTTCEEE
T ss_pred HhcCCCccCCCce-EEeCCCCCCcEEEeCCCCcEEEEECccccccC
Confidence 23 899999999999987753 689999987653
|
| >3mkr_A Coatomer subunit epsilon; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus} | Back alignment and structure |
|---|
Probab=99.13 E-value=3.6e-10 Score=103.50 Aligned_cols=102 Identities=12% Similarity=-0.028 Sum_probs=88.6
Q ss_pred HHHHHHHHhHHHhhCCHHHHHHHHHHHhcCCCCCCHHHHHHHH--HHHHhcCChHHHHHHHHHHHhcCCCchHHHHHHHH
Q 014478 319 TLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRC--LSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAA 396 (424)
Q Consensus 319 ~~~~~~~g~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~~~~~~--~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~ 396 (424)
...+...|..+.+.|++++|++.|+++++.+|+ ........+ ..+...|++++|+..|+++++.+|+++.+++++|.
T Consensus 130 ~~~~~~l~~~~~~~g~~~~A~~~l~~~~~~~p~-~~~~~l~~a~~~l~~~~~~~~eA~~~~~~~l~~~p~~~~~~~~la~ 208 (291)
T 3mkr_A 130 LECMAMTVQILLKLDRLDLARKELKKMQDQDED-ATLTQLATAWVSLAAGGEKLQDAYYIFQEMADKCSPTLLLLNGQAA 208 (291)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHHHSCCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHhhCcC-cHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHhCCCcHHHHHHHHH
Confidence 446667899999999999999999999999998 653333223 23345689999999999999999999999999999
Q ss_pred HHHhCCChHHHHHHHHHHHhchhhc
Q 014478 397 CLFSLGMENDARETLKDGTNLEAKK 421 (424)
Q Consensus 397 ~~~~~~~~~~A~~~~~~al~l~~~~ 421 (424)
++..+|++++|+..|+++++++|.+
T Consensus 209 ~~~~~g~~~eA~~~l~~al~~~p~~ 233 (291)
T 3mkr_A 209 CHMAQGRWEAAEGVLQEALDKDSGH 233 (291)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHCTTC
T ss_pred HHHHcCCHHHHHHHHHHHHHhCCCC
Confidence 9999999999999999999999975
|
| >1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3 | Back alignment and structure |
|---|
Probab=99.13 E-value=4.4e-11 Score=117.46 Aligned_cols=101 Identities=17% Similarity=0.096 Sum_probs=90.9
Q ss_pred HHHHHHHHhHHHhhCCHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhcCCCchHHHHHHHHH-
Q 014478 319 TLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAAC- 397 (424)
Q Consensus 319 ~~~~~~~g~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~- 397 (424)
+..+...|..+++.|+|++|++.|++|++++|+ +..+++++|.+|..+|++++|+..+++|++++|++..++.++|.+
T Consensus 40 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~-~~~~~~~lg~~~~~~g~~~eA~~~~~~al~~~p~~~~~~~~l~~~~ 118 (477)
T 1wao_1 40 AIYYGNRSLAYLRTECYGYALGDATRAIELDKK-YIKGYYRRAASNMALGKFRAALRDYETVVKVKPHDKDAKMKYQECN 118 (477)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHSCTT-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTCTTHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Confidence 567778999999999999999999999999999 999999999999999999999999999999999999999999998
Q ss_pred -HHhCCChHHHHHHHH-----------HHHhchhh
Q 014478 398 -LFSLGMENDARETLK-----------DGTNLEAK 420 (424)
Q Consensus 398 -~~~~~~~~~A~~~~~-----------~al~l~~~ 420 (424)
+..+|++++|++.++ ++++++|+
T Consensus 119 ~~~~~g~~~~A~~~~~~~~~~~~~~~~~al~~~~~ 153 (477)
T 1wao_1 119 KIVKQKAFERAIAGDEHKRSVVDSLDIESMTIEDE 153 (477)
T ss_dssp HHHHHHHHCCC------CCSTTTCCTTSSCCCCTT
T ss_pred HHHHHHHHHHHhccccccchhHhhhhhhhcccccc
Confidence 899999999999999 88877775
|
| >3dra_A Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha; geranylgeranyltrasferase, ggtase, ggtase-I, PGGT, prenyltransferase, farnesyltransferase; HET: B3P GRG; 1.80A {Candida albicans} | Back alignment and structure |
|---|
Probab=99.12 E-value=1.3e-09 Score=99.80 Aligned_cols=103 Identities=8% Similarity=-0.031 Sum_probs=95.7
Q ss_pred HHHHHHHHHhHHHhhC--CHHHHHHHHHHHhcCCCCCCHHHHHHHHHHH----Hhc---CChHHHHHHHHHHHhcCCCch
Q 014478 318 ETLNSKKHGDTAFRAK--DFSTAIDCYTQFIDGGTMVSPTVYARRCLSY----LMN---DMPQEALGDAMQAQVVSPDWP 388 (424)
Q Consensus 318 ~~~~~~~~g~~~~~~g--~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~----~~~---~~~~~A~~~~~~al~~~p~~~ 388 (424)
....+..+|......| ++++|++.++++|..+|+ +..+|+.|+.++ ..+ +++++++..++++++.+|+|.
T Consensus 66 ~~taWn~R~~~L~~l~~~~~~eeL~~~~~~L~~nPk-~y~aW~~R~~iL~~~~~~l~~~~~~~~EL~~~~~~l~~~pkny 144 (306)
T 3dra_A 66 HYTIWIYRFNILKNLPNRNLYDELDWCEEIALDNEK-NYQIWNYRQLIIGQIMELNNNDFDPYREFDILEAMLSSDPKNH 144 (306)
T ss_dssp CHHHHHHHHHHHHTCTTSCHHHHHHHHHHHHHHCTT-CCHHHHHHHHHHHHHHHHTTTCCCTHHHHHHHHHHHHHCTTCH
T ss_pred HHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHCcc-cHHHHHHHHHHHHHHHHhccccCCHHHHHHHHHHHHHhCCCCH
Confidence 4456777888888888 999999999999999999 999999999999 777 789999999999999999999
Q ss_pred HHHHHHHHHHHhCCChH--HHHHHHHHHHhchhhc
Q 014478 389 TALYLQAACLFSLGMEN--DARETLKDGTNLEAKK 421 (424)
Q Consensus 389 ~a~~~~g~~~~~~~~~~--~A~~~~~~al~l~~~~ 421 (424)
.+|+.++.++..+|+++ ++++++.++++.||++
T Consensus 145 ~aW~~R~~vl~~l~~~~~~~EL~~~~~~i~~d~~N 179 (306)
T 3dra_A 145 HVWSYRKWLVDTFDLHNDAKELSFVDKVIDTDLKN 179 (306)
T ss_dssp HHHHHHHHHHHHTTCTTCHHHHHHHHHHHHHCTTC
T ss_pred HHHHHHHHHHHHhcccChHHHHHHHHHHHHhCCCC
Confidence 99999999999999999 9999999999999975
|
| >2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.11 E-value=5.9e-10 Score=88.27 Aligned_cols=85 Identities=11% Similarity=0.008 Sum_probs=80.2
Q ss_pred HHHHHHHHHhHHHhhCCHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhcCCCchHHHHHHHHH
Q 014478 318 ETLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAAC 397 (424)
Q Consensus 318 ~~~~~~~~g~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~ 397 (424)
....+...|..++..|++++|++.|+++++.+|. +..++.++|.+|..+|++++|+..++++++++|++..+++.+|.+
T Consensus 49 ~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~-~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~l~~~ 127 (133)
T 2lni_A 49 DAKLYSNRAACYTKLLEFQLALKDCEECIQLEPT-FIKGYTRKAAALEAMKDYTKAMDVYQKALDLDSSCKEAADGYQRC 127 (133)
T ss_dssp CHHHHHHHHHHHTTTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCGGGTHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCC-chHHHHHHHHHHHHHhhHHHHHHHHHHHHHhCCCchHHHHHHHHH
Confidence 3556778999999999999999999999999999 999999999999999999999999999999999999999999999
Q ss_pred HHhCCC
Q 014478 398 LFSLGM 403 (424)
Q Consensus 398 ~~~~~~ 403 (424)
+..+|+
T Consensus 128 ~~~~~~ 133 (133)
T 2lni_A 128 MMAQYN 133 (133)
T ss_dssp HHHHTC
T ss_pred HHHhcC
Confidence 988764
|
| >2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.09 E-value=3.4e-10 Score=86.85 Aligned_cols=69 Identities=17% Similarity=0.121 Sum_probs=66.3
Q ss_pred CHHHHHHHHHHHHhcCChHHHHHHHHHHHhcCCCchHHHHHHHHHHHhCCChHHHHHHHHHHHhchhhc
Q 014478 353 SPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAACLFSLGMENDARETLKDGTNLEAKK 421 (424)
Q Consensus 353 ~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~ 421 (424)
....+.++|.++...|++++|+..|+++++++|+++.+++++|.++..+|++++|+..|+++++++|.+
T Consensus 3 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~ 71 (111)
T 2l6j_A 3 QFEKQKEQGNSLFKQGLYREAVHCYDQLITAQPQNPVGYSNKAMALIKLGEYTQAIQMCQQGLRYTSTA 71 (111)
T ss_dssp HHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTSCSST
T ss_pred hHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCc
Confidence 467899999999999999999999999999999999999999999999999999999999999999975
|
| >3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A | Back alignment and structure |
|---|
Probab=99.07 E-value=8.3e-10 Score=109.44 Aligned_cols=104 Identities=13% Similarity=0.057 Sum_probs=97.8
Q ss_pred HHHHHHHHHhHHHhhCCHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhcCCCchHHHHHHHHH
Q 014478 318 ETLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAAC 397 (424)
Q Consensus 318 ~~~~~~~~g~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~ 397 (424)
....+...|..+...|++++|++.|+++++.+|+ +..++.++|.+|..+|++++|+..++++++.+|+++.+++.+|.+
T Consensus 309 ~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~-~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~l~~~ 387 (537)
T 3fp2_A 309 YPPTYYHRGQMYFILQDYKNAKEDFQKAQSLNPE-NVYPYIQLACLLYKQGKFTESEAFFNETKLKFPTLPEVPTFFAEI 387 (537)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CSHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTHHHHHHHHH
T ss_pred CHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHHHHHHHH
Confidence 3456778899999999999999999999999999 899999999999999999999999999999999999999999999
Q ss_pred HHhCCChHHHHHHHHHHHhchhhcC
Q 014478 398 LFSLGMENDARETLKDGTNLEAKKN 422 (424)
Q Consensus 398 ~~~~~~~~~A~~~~~~al~l~~~~~ 422 (424)
+..+|++++|+..|+++++++|...
T Consensus 388 ~~~~g~~~~A~~~~~~a~~~~~~~~ 412 (537)
T 3fp2_A 388 LTDRGDFDTAIKQYDIAKRLEEVQE 412 (537)
T ss_dssp HHHTTCHHHHHHHHHHHHHHHHHCS
T ss_pred HHHhCCHHHHHHHHHHHHHcCCcch
Confidence 9999999999999999999998753
|
| >2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=99.07 E-value=1.2e-10 Score=109.16 Aligned_cols=100 Identities=15% Similarity=0.027 Sum_probs=59.1
Q ss_pred HHHHHHhHHHhhCCHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhcCCCchHHHHHHHHH-HH
Q 014478 321 NSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAAC-LF 399 (424)
Q Consensus 321 ~~~~~g~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~-~~ 399 (424)
.+...|..+++.|+|++|+..|+++++++|+ +..+|+++|.+|..+|++++|+.+|++|++++|++..++..++.+ ..
T Consensus 232 ~~~nla~~~~~~g~~~~A~~~~~~al~~~p~-~~~a~~~lg~a~~~~g~~~~A~~~l~~al~l~p~~~~a~~~L~~l~~~ 310 (338)
T 2if4_A 232 CHLNIAACLIKLKRYDEAIGHCNIVLTEEEK-NPKALFRRGKAKAELGQMDSARDDFRKAQKYAPDDKAIRRELRALAEQ 310 (338)
T ss_dssp HHHHHHHHHHTTTCCHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHTTTCHHHHHHHHHHTTC------------------
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
Confidence 5678899999999999999999999999999 999999999999999999999999999999999999999999998 55
Q ss_pred hCCChHHHHHHHHHHHhchhhc
Q 014478 400 SLGMENDARETLKDGTNLEAKK 421 (424)
Q Consensus 400 ~~~~~~~A~~~~~~al~l~~~~ 421 (424)
..+.++++...|+++++.+|.+
T Consensus 311 ~~~~~~~a~~~~~~~l~~~p~~ 332 (338)
T 2if4_A 311 EKALYQKQKEMYKGIFKGKDEG 332 (338)
T ss_dssp ----------------------
T ss_pred HHHHHHHHHHHHHHhhCCCCCC
Confidence 6778899999999999999875
|
| >1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A | Back alignment and structure |
|---|
Probab=99.06 E-value=5.3e-10 Score=82.45 Aligned_cols=73 Identities=16% Similarity=0.155 Sum_probs=67.1
Q ss_pred CCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhcCCCchHHHHHHHHHHHhCCChHHHHHHHHHHHhchhhc
Q 014478 349 GTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAACLFSLGMENDARETLKDGTNLEAKK 421 (424)
Q Consensus 349 ~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~ 421 (424)
+|.....+++++|.++...|++++|+..++++++++|++..+++++|.++..+|++++|+..|+++++++|.+
T Consensus 4 ~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~p~~ 76 (91)
T 1na3_A 4 DPGNSAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNN 76 (91)
T ss_dssp --CHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC
T ss_pred cccccHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCC
Confidence 4433678899999999999999999999999999999999999999999999999999999999999999864
|
| >3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.06 E-value=4.1e-10 Score=88.96 Aligned_cols=69 Identities=12% Similarity=-0.021 Sum_probs=66.4
Q ss_pred CHHHHHHHHHHHHhcCChHHHHHHHHHHHhcCCCchHHHHHHHHHHHhCCChHHHHHHHHHHHhchhhc
Q 014478 353 SPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAACLFSLGMENDARETLKDGTNLEAKK 421 (424)
Q Consensus 353 ~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~ 421 (424)
....+.++|.++.+.|++++|+..|+++++++|+++.+|+++|.++..+|++++|+.+|+++++++|..
T Consensus 3 ~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~ 71 (126)
T 3upv_A 3 KAEEARLEGKEYFTKSDWPNAVKAYTEMIKRAPEDARGYSNRAAALAKLMSFPEAIADCNKAIEKDPNF 71 (126)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC
T ss_pred hHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCc
Confidence 567899999999999999999999999999999999999999999999999999999999999999974
|
| >1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A | Back alignment and structure |
|---|
Probab=99.03 E-value=6.8e-10 Score=108.40 Aligned_cols=91 Identities=14% Similarity=0.154 Sum_probs=83.0
Q ss_pred HHHHHHHHhHHHhhCCHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhcCCCchHHHHHHHHHH
Q 014478 319 TLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAACL 398 (424)
Q Consensus 319 ~~~~~~~g~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~ 398 (424)
+..+...|..+++.|+|++|+..|++||+++|+ +..+|+++|.+|..+|++++|+.+|++|++++|++..++.++|.++
T Consensus 317 ~~~~~nla~~~~~~g~~~~A~~~~~~al~~~p~-~~~a~~~~g~a~~~~g~~~~A~~~~~~al~l~P~~~~a~~~l~~~~ 395 (457)
T 1kt0_A 317 LAAFLNLAMCYLKLREYTKAVECCDKALGLDSA-NEKGLYRRGEAQLLMNEFESAKGDFEKVLEVNPQNKAARLQISMCQ 395 (457)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTC----CHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCc-cHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Confidence 457778999999999999999999999999999 9999999999999999999999999999999999999999999999
Q ss_pred HhCCChHHHHHH
Q 014478 399 FSLGMENDARET 410 (424)
Q Consensus 399 ~~~~~~~~A~~~ 410 (424)
..++++++|...
T Consensus 396 ~~~~~~~~a~~~ 407 (457)
T 1kt0_A 396 KKAKEHNERDRR 407 (457)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 999999988754
|
| >2ond_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 2.80A {Mus musculus} SCOP: a.118.8.7 | Back alignment and structure |
|---|
Probab=99.03 E-value=1.4e-09 Score=100.29 Aligned_cols=102 Identities=11% Similarity=-0.034 Sum_probs=72.6
Q ss_pred HHHHHHHHhHHHhhCCHHHHHHHHHHHhcCCCCCCHH-HHHHHHHHHHhcCChHHHHHHHHHHHhcCCCchHHHHHHHHH
Q 014478 319 TLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPT-VYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAAC 397 (424)
Q Consensus 319 ~~~~~~~g~~~~~~g~~~~A~~~~~~ai~~~p~~~~~-~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~ 397 (424)
...+...|..+.+.|++++|.+.|+++++.+|. +.. +|.+++.++.+.|++++|+..|++|++.+|....+|...|..
T Consensus 99 ~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~-~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~~~~a~~ 177 (308)
T 2ond_A 99 MLLYFAYADYEESRMKYEKVHSIYNRLLAIEDI-DPTLVYIQYMKFARRAEGIKSGRMIFKKAREDARTRHHVYVTAALM 177 (308)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHTSSSS-CTHHHHHHHHHHHHHHHCHHHHHHHHHHHHTSTTCCTHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHhcccc-CccHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHH
Confidence 345566677777777777777777777777777 554 777777777777777777777777777777777776655554
Q ss_pred HH-hCCChHHHHHHHHHHHhchhhc
Q 014478 398 LF-SLGMENDARETLKDGTNLEAKK 421 (424)
Q Consensus 398 ~~-~~~~~~~A~~~~~~al~l~~~~ 421 (424)
.+ .+|++++|+..|++|++++|++
T Consensus 178 ~~~~~~~~~~A~~~~~~al~~~p~~ 202 (308)
T 2ond_A 178 EYYCSKDKSVAFKIFELGLKKYGDI 202 (308)
T ss_dssp HHHTSCCHHHHHHHHHHHHHHHTTC
T ss_pred HHHHcCCHHHHHHHHHHHHHhCCCc
Confidence 33 2677777777777777777753
|
| >3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A | Back alignment and structure |
|---|
Probab=99.03 E-value=6e-10 Score=100.24 Aligned_cols=103 Identities=11% Similarity=-0.007 Sum_probs=94.7
Q ss_pred HHHHHHHHHHhHHHhhCCHHHHHHHHHHHhcC--------CCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhc-----
Q 014478 317 QETLNSKKHGDTAFRAKDFSTAIDCYTQFIDG--------GTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVV----- 383 (424)
Q Consensus 317 ~~~~~~~~~g~~~~~~g~~~~A~~~~~~ai~~--------~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~----- 383 (424)
..+..+...|..+...|++++|++.|.++++. +|. ...++.++|.+|..+|++++|+..+++++++
T Consensus 83 ~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~-~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~ 161 (283)
T 3edt_B 83 AVAATLNNLAVLYGKRGKYKEAEPLCKRALEIREKVLGKFHPD-VAKQLNNLALLCQNQGKAEEVEYYYRRALEIYATRL 161 (283)
T ss_dssp HHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHCTTCHH-HHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHcCCCChH-HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhc
Confidence 34557778999999999999999999999988 466 7889999999999999999999999999999
Q ss_pred ---CCCchHHHHHHHHHHHhCCChHHHHHHHHHHHhchhh
Q 014478 384 ---SPDWPTALYLQAACLFSLGMENDARETLKDGTNLEAK 420 (424)
Q Consensus 384 ---~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~ 420 (424)
+|....+++++|.++..+|++++|+..|++++++.+.
T Consensus 162 ~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~l~~~~~ 201 (283)
T 3edt_B 162 GPDDPNVAKTKNNLASCYLKQGKYQDAETLYKEILTRAHE 201 (283)
T ss_dssp CTTCHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHH
Confidence 8888999999999999999999999999999998654
|
| >3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A | Back alignment and structure |
|---|
Probab=99.03 E-value=7.1e-10 Score=101.50 Aligned_cols=102 Identities=14% Similarity=0.133 Sum_probs=88.3
Q ss_pred HHHHHHHHhHHHhhCCHHHHHHHHHHHhcC------CCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhcCCCc-----
Q 014478 319 TLNSKKHGDTAFRAKDFSTAIDCYTQFIDG------GTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDW----- 387 (424)
Q Consensus 319 ~~~~~~~g~~~~~~g~~~~A~~~~~~ai~~------~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~----- 387 (424)
+..+...|..++..|+|++|+++|.+|++. ++.....+++|+|.+|.++|+|++|+..+++|+++.++.
T Consensus 155 ~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~nlg~~y~~~~~y~~A~~~~~~al~~~~~~~~~~~ 234 (293)
T 3u3w_A 155 LYIENAIANIYAENGYLKKGIDLFEQILKQLEALHDNEEFDVKVRYNHAKALYLDSRYEESLYQVNKAIEISCRINSMAL 234 (293)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTBCTT
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHcCcHHH
Confidence 445778999999999999999999999942 222145689999999999999999999999999887554
Q ss_pred -hHHHHHHHHHHHhCCC-hHHHHHHHHHHHhchhh
Q 014478 388 -PTALYLQAACLFSLGM-ENDARETLKDGTNLEAK 420 (424)
Q Consensus 388 -~~a~~~~g~~~~~~~~-~~~A~~~~~~al~l~~~ 420 (424)
+.+|+++|.++..+|+ +++|+++|++|+++...
T Consensus 235 ~~~~~~~lg~~~~~~g~~~~~A~~~~~~Al~i~~~ 269 (293)
T 3u3w_A 235 IGQLYYQRGECLRKLEYEEAEIEDAYKKASFFFDI 269 (293)
T ss_dssp HHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHH
Confidence 8899999999999995 69999999999987653
|
| >2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1 | Back alignment and structure |
|---|
Probab=99.03 E-value=5.7e-10 Score=95.74 Aligned_cols=97 Identities=12% Similarity=0.076 Sum_probs=83.4
Q ss_pred HHHHHHHHhHHHhhCCHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhcCCCchHHHHHHHHHH
Q 014478 319 TLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAACL 398 (424)
Q Consensus 319 ~~~~~~~g~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~ 398 (424)
...+...|..++..|+|++|+..|+++++.+|+ +..+++++|.+|..+|++++|+..|+++++++|++..++..++.++
T Consensus 88 ~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~-~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~ 166 (198)
T 2fbn_A 88 ISCNLNLATCYNKNKDYPKAIDHASKVLKIDKN-NVKALYKLGVANMYFGFLEEAKENLYKAASLNPNNLDIRNSYELCV 166 (198)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCcc-cHHHHHHHHHHHHHcccHHHHHHHHHHHHHHCCCcHHHHHHHHHHH
Confidence 456678899999999999999999999999999 9999999999999999999999999999999999999999999999
Q ss_pred HhCCChHHHH-HHHHHHHh
Q 014478 399 FSLGMENDAR-ETLKDGTN 416 (424)
Q Consensus 399 ~~~~~~~~A~-~~~~~al~ 416 (424)
..+++++++. ..|.+.+.
T Consensus 167 ~~~~~~~~~~~~~~~~~f~ 185 (198)
T 2fbn_A 167 NKLKEARKKDKLTFGGMFD 185 (198)
T ss_dssp HHHHHHHC-----------
T ss_pred HHHHHHHHHHHHHHHHHhc
Confidence 9999999888 55555544
|
| >3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans} | Back alignment and structure |
|---|
Probab=99.02 E-value=1.2e-09 Score=85.16 Aligned_cols=84 Identities=10% Similarity=-0.062 Sum_probs=74.2
Q ss_pred HHHHHHHHHHHhHHHhhCCHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhcCCCchHHHHHHH
Q 014478 316 MQETLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQA 395 (424)
Q Consensus 316 ~~~~~~~~~~g~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g 395 (424)
......+...|..++..|+|++|++.|+++++.+|+ +..+++++|.+|..+|++++|+..++++++.+|+++.......
T Consensus 24 p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~-~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~ 102 (117)
T 3k9i_A 24 KDLAECYLGLGSTFRTLGEYRKAEAVLANGVKQFPN-HQALRVFYAMVLYNLGRYEQGVELLLKIIAETSDDETIQSYKQ 102 (117)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHCCCHHHHHTHH
T ss_pred ccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-chHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHH
Confidence 345667889999999999999999999999999999 9999999999999999999999999999999999998765444
Q ss_pred HHHHh
Q 014478 396 ACLFS 400 (424)
Q Consensus 396 ~~~~~ 400 (424)
.+...
T Consensus 103 ai~~~ 107 (117)
T 3k9i_A 103 AILFY 107 (117)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 43333
|
| >2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
Probab=99.02 E-value=1.5e-09 Score=109.21 Aligned_cols=102 Identities=17% Similarity=0.119 Sum_probs=87.1
Q ss_pred HHHHHHHhHHHhhCCHHHHHHHHHHHhcC------CCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhcCCCchHHHHH
Q 014478 320 LNSKKHGDTAFRAKDFSTAIDCYTQFIDG------GTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYL 393 (424)
Q Consensus 320 ~~~~~~g~~~~~~g~~~~A~~~~~~ai~~------~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~ 393 (424)
..+...|..+.+.|++++|++.|+++++. +|+....+|.+++.+|.+.|++++|+..++++++++|+++.+|+.
T Consensus 476 ~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~p~~~~~~~~ 555 (597)
T 2xpi_A 476 LLLNELGVVAFNKSDMQTAINHFQNALLLVKKTQSNEKPWAATWANLGHAYRKLKMYDAAIDALNQGLLLSTNDANVHTA 555 (597)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCSGGGHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSSCCHHHHHH
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHHhhhccccchhhHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCChHHHHH
Confidence 34667788888889999999999988887 555226788899999999999999999999999999999999999
Q ss_pred HHHHHHhCCChHHHHHHHHHHHhchhhc
Q 014478 394 QAACLFSLGMENDARETLKDGTNLEAKK 421 (424)
Q Consensus 394 ~g~~~~~~~~~~~A~~~~~~al~l~~~~ 421 (424)
+|.+|..+|++++|++.|+++++++|++
T Consensus 556 l~~~~~~~g~~~~A~~~~~~~l~~~p~~ 583 (597)
T 2xpi_A 556 IALVYLHKKIPGLAITHLHESLAISPNE 583 (597)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHCTTC
T ss_pred HHHHHHHhCCHHHHHHHHHHHHhcCCCC
Confidence 9999999999999999999999998874
|
| >2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1 | Back alignment and structure |
|---|
Probab=99.02 E-value=1.3e-09 Score=85.65 Aligned_cols=85 Identities=14% Similarity=0.029 Sum_probs=80.7
Q ss_pred HHHHHHHHhHHHhhCCHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhcCCCchHHHHHHHHHH
Q 014478 319 TLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAACL 398 (424)
Q Consensus 319 ~~~~~~~g~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~ 398 (424)
...+...|..++..|++++|++.|.++++.+|+ +..++.++|.++..+|++++|+..++++++++|++..+++.+|.++
T Consensus 46 ~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~l~~~~ 124 (131)
T 2vyi_A 46 AVYFCNRAAAYSKLGNYAGAVQDCERAICIDPA-YSKAYGRMGLALSSLNKHVEAVAYYKKALELDPDNETYKSNLKIAE 124 (131)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhchHHHHHHHHHHHhcCcc-CHHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCccchHHHHHHHHHH
Confidence 445678899999999999999999999999999 9999999999999999999999999999999999999999999999
Q ss_pred HhCCCh
Q 014478 399 FSLGME 404 (424)
Q Consensus 399 ~~~~~~ 404 (424)
..+|++
T Consensus 125 ~~~~~~ 130 (131)
T 2vyi_A 125 LKLREA 130 (131)
T ss_dssp HHHTTC
T ss_pred HHHhcC
Confidence 999886
|
| >1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6 | Back alignment and structure |
|---|
Probab=99.02 E-value=2.5e-10 Score=102.65 Aligned_cols=120 Identities=15% Similarity=0.080 Sum_probs=86.6
Q ss_pred cccceeeee-cceecccccCCCchhhhHHHHHHHHHhcCCCcC--cceeEEEEEeCCeeeEEEecCCCCCHHhHhccCCC
Q 014478 5 CSKFSICWF-HCHLKSSVLESSDLGETLNLEEAKAVGNLRSER--LANLIGCCYEADERLLVAEFMPNETLAKHLFHWET 81 (424)
Q Consensus 5 g~v~~~~~~-~~~v~~~~~~~~~~~~~~~~~E~~~l~~l~h~~--iv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~ 81 (424)
+.||+.... +..+.+|+.... ....+.+|+.+++.+.+.+ ++++++++..++..++||||++|.+|. ...
T Consensus 34 ~~v~~~~~~~g~~~vlK~~~~~--~~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~~~~~v~e~i~G~~l~--~~~--- 106 (264)
T 1nd4_A 34 AAVFRLSAQGRPVLFVKTDLSG--ALNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEVPGQDLL--SSH--- 106 (264)
T ss_dssp CEEEEEECTTSCCEEEEEECSC--TTSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEECCSSEETT--TSC---
T ss_pred ceEEEEecCCCCeEEEEeCCcc--cchhhhHHHHHHHHHHhCCCCCCeEEEeccCCCCCEEEEEecCCcccC--cCc---
Confidence 566766542 344555654433 3356789999999995434 677999888877789999999999884 211
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHhCC------------------------------------------------------
Q 014478 82 QPMKWAMRLRVALYLAQALEYCSSKG------------------------------------------------------ 107 (424)
Q Consensus 82 ~~l~~~~~~~i~~qi~~~L~~lH~~~------------------------------------------------------ 107 (424)
.+ ...++.+++..|..||+..
T Consensus 107 --~~---~~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 181 (264)
T 1nd4_A 107 --LA---PAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQGLAPAELFARLKARMPDG 181 (264)
T ss_dssp --CC---HHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGGTTCCHHHHHHHHHHTCCSS
T ss_pred --CC---HhHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhcCCccchhhhhhccCccHHHHHHHHHHhcCCC
Confidence 12 2256777888888888642
Q ss_pred -C--cccccCCCCCeeecCCCCeEEccccccc
Q 014478 108 -R--ALYHDLNAYRILFDKDGNPRLSSFGLMK 136 (424)
Q Consensus 108 -~--ivH~dikp~Nill~~~~~~kl~Dfg~~~ 136 (424)
+ ++|+|++|.||++++++.+.|+|||.+.
T Consensus 182 ~~~~l~HgDl~~~Nil~~~~~~~~liD~~~a~ 213 (264)
T 1nd4_A 182 EDLVVTHGDACLPNIMVENGRFSGFIDCGRLG 213 (264)
T ss_dssp CCEEEECSSCCGGGEEEETTEEEEECCCTTCE
T ss_pred CCeEEECCCCCCCcEEEECCcEEEEEcchhcc
Confidence 0 8999999999999877666799999754
|
| >2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646} | Back alignment and structure |
|---|
Probab=99.01 E-value=4.3e-09 Score=96.25 Aligned_cols=100 Identities=9% Similarity=0.003 Sum_probs=86.2
Q ss_pred HHHHHHhHHHhhCCHHHHHHHHHHHhcCCCCC---C--HHHHHHHHHHHHhcCChHHHHHHHHHHH---hcCCCch----
Q 014478 321 NSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMV---S--PTVYARRCLSYLMNDMPQEALGDAMQAQ---VVSPDWP---- 388 (424)
Q Consensus 321 ~~~~~g~~~~~~g~~~~A~~~~~~ai~~~p~~---~--~~~~~~~~~~~~~~~~~~~A~~~~~~al---~~~p~~~---- 388 (424)
.....|..+...|++++|++.|.+|++..+.. . ..+++++|.+|..+|++++|+..|++|+ +..|++.
T Consensus 117 ~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~~~~~~A~~~~~kal~~~~~~~~~~~~~~ 196 (293)
T 2qfc_A 117 WQYYVAAYVLKKVDYEYCILELKKLLNQQLTGIDVYQNLYIENAIANIYAENGYLKKGIDLFEQILKQLEALHDNEEFDV 196 (293)
T ss_dssp HHHHHHHHHHTSSCHHHHHHHHHHHHTTCCCSSCTTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCHHHHH
T ss_pred HHHHHHHHHhcCCCHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcCccccchH
Confidence 34457888889999999999999999876541 1 5689999999999999999999999999 5566643
Q ss_pred HHHHHHHHHHHhCCChHHHHHHHHHHHhchhh
Q 014478 389 TALYLQAACLFSLGMENDARETLKDGTNLEAK 420 (424)
Q Consensus 389 ~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~ 420 (424)
.+++++|.+|..+|+|++|+.+|++|+++.++
T Consensus 197 ~~~~nlg~~y~~~~~y~~Al~~~~kal~~~~~ 228 (293)
T 2qfc_A 197 KVRYNHAKALYLDSRYEESLYQVNKAIEISCR 228 (293)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHhHHHHHHHHhhHHHHHHHHHHHHHHHHh
Confidence 69999999999999999999999999998754
|
| >3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A | Back alignment and structure |
|---|
Probab=99.01 E-value=1.1e-09 Score=98.55 Aligned_cols=100 Identities=10% Similarity=-0.018 Sum_probs=92.1
Q ss_pred HHHHHHHHHHhHHHhhCCHHHHHHHHHHHhcCC--------CCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhc-----
Q 014478 317 QETLNSKKHGDTAFRAKDFSTAIDCYTQFIDGG--------TMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVV----- 383 (424)
Q Consensus 317 ~~~~~~~~~g~~~~~~g~~~~A~~~~~~ai~~~--------p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~----- 383 (424)
..+..+...|..++..|++++|++.|.++++.. |. ...++.++|.+|..+|++++|+..+++++.+
T Consensus 41 ~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~-~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~ 119 (283)
T 3edt_B 41 DVATMLNILALVYRDQNKYKEAAHLLNDALAIREKTLGKDHPA-VAATLNNLAVLYGKRGKYKEAEPLCKRALEIREKVL 119 (283)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTTCHH-HHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHcCCcchH-HHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHc
Confidence 345677789999999999999999999999773 55 6789999999999999999999999999998
Q ss_pred ---CCCchHHHHHHHHHHHhCCChHHHHHHHHHHHhc
Q 014478 384 ---SPDWPTALYLQAACLFSLGMENDARETLKDGTNL 417 (424)
Q Consensus 384 ---~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l 417 (424)
+|....+++++|.++..+|++++|+..|++++++
T Consensus 120 ~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~ 156 (283)
T 3edt_B 120 GKFHPDVAKQLNNLALLCQNQGKAEEVEYYYRRALEI 156 (283)
T ss_dssp CTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHH
T ss_pred CCCChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 6888999999999999999999999999999998
|
| >4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.01 E-value=1.4e-09 Score=106.12 Aligned_cols=98 Identities=12% Similarity=0.001 Sum_probs=55.7
Q ss_pred HHHHHhHHHhhCCHHHHHHHHHHHhcCC--------CCCCHHHHHHHHHHHHhc--CChHHHHHHHHHHHhcCCCchHHH
Q 014478 322 SKKHGDTAFRAKDFSTAIDCYTQFIDGG--------TMVSPTVYARRCLSYLMN--DMPQEALGDAMQAQVVSPDWPTAL 391 (424)
Q Consensus 322 ~~~~g~~~~~~g~~~~A~~~~~~ai~~~--------p~~~~~~~~~~~~~~~~~--~~~~~A~~~~~~al~~~p~~~~a~ 391 (424)
+...|..++..|++++|+.+|++++++. +. .+.++.++|.++... ++|++|+..|++|++++|+++.++
T Consensus 97 ~~nla~~y~~~g~~~~A~~~~~ka~~i~~~~~~~~~~~-~~~~~~~~g~~~~~~~~~~y~~A~~~~~kal~~~p~~~~~~ 175 (472)
T 4g1t_A 97 WGNYAWVYYHMGRLSDVQIYVDKVKHVCEKFSSPYRIE-SPELDCEEGWTRLKCGGNQNERAKVCFEKALEKKPKNPEFT 175 (472)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCSSCCC-CHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHHHSTTCHHHH
T ss_pred HHHHHHHHHHcCChHHHHHHHHHHHHHhHhcccccchh-hHHHHHHHHHHHHHHccccHHHHHHHHHHHHHhCCCCHHHH
Confidence 3455556666666666666666665432 12 345555555555443 346666666666666666666666
Q ss_pred HHHHHHHH---hCCChHHHHHHHHHHHhchhh
Q 014478 392 YLQAACLF---SLGMENDARETLKDGTNLEAK 420 (424)
Q Consensus 392 ~~~g~~~~---~~~~~~~A~~~~~~al~l~~~ 420 (424)
+.+|.++. ..+++++|++.|++|++++|.
T Consensus 176 ~~~~~~~~~l~~~~~~~~al~~~~~al~l~p~ 207 (472)
T 4g1t_A 176 SGLAIASYRLDNWPPSQNAIDPLRQAIRLNPD 207 (472)
T ss_dssp HHHHHHHHHHHHSCCCCCTHHHHHHHHHHCSS
T ss_pred HHHHHHHHHhcCchHHHHHHHHHHHHhhcCCc
Confidence 66665533 345556666666666666654
|
| >2r5s_A Uncharacterized protein VP0806; APC090868.1, vibrio parahaemolyticus RIMD 22 structural genomics, PSI-2, protein structure initiative; HET: MES; 2.14A {Vibrio parahaemolyticus} | Back alignment and structure |
|---|
Probab=99.01 E-value=8.5e-10 Score=92.82 Aligned_cols=82 Identities=13% Similarity=-0.015 Sum_probs=77.2
Q ss_pred CHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhcCCCc--hHHHHHHHHHHHhCCChHHHHHHH
Q 014478 334 DFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDW--PTALYLQAACLFSLGMENDARETL 411 (424)
Q Consensus 334 ~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~--~~a~~~~g~~~~~~~~~~~A~~~~ 411 (424)
+..+|++.|+++++.+|+ +..+++++|.++...|++++|+..++++++++|++ ..+++++|.++..+|++++|+..|
T Consensus 89 ~~~~a~~~~~~al~~~P~-~~~~~~~la~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~a~~~l~~~~~~~g~~~~A~~~y 167 (176)
T 2r5s_A 89 AESPELKRLEQELAANPD-NFELACELAVQYNQVGRDEEALELLWNILKVNLGAQDGEVKKTFMDILSALGQGNAIASKY 167 (176)
T ss_dssp TSCHHHHHHHHHHHHSTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTTTTTTHHHHHHHHHHHHHCSSCHHHHHH
T ss_pred ccchHHHHHHHHHHhCCC-CHHHHHHHHHHHHHcccHHHHHHHHHHHHHhCcccChHHHHHHHHHHHHHhCCCCcHHHHH
Confidence 445689999999999999 99999999999999999999999999999999986 569999999999999999999999
Q ss_pred HHHHh
Q 014478 412 KDGTN 416 (424)
Q Consensus 412 ~~al~ 416 (424)
+++|.
T Consensus 168 ~~al~ 172 (176)
T 2r5s_A 168 RRQLY 172 (176)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 99985
|
| >2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8 | Back alignment and structure |
|---|
Probab=99.00 E-value=9e-10 Score=89.79 Aligned_cols=68 Identities=13% Similarity=0.017 Sum_probs=63.2
Q ss_pred HHHHHHHHHHHHhcCChHHHHHHHHHHHhcCCC-------chH-----HHHHHHHHHHhCCChHHHHHHHHHHHhc----
Q 014478 354 PTVYARRCLSYLMNDMPQEALGDAMQAQVVSPD-------WPT-----ALYLQAACLFSLGMENDARETLKDGTNL---- 417 (424)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~-------~~~-----a~~~~g~~~~~~~~~~~A~~~~~~al~l---- 417 (424)
...+.++|..+.++|+|++|+..|++||+++|+ +.. +|+++|.++..+|+|++|+.+|++||++
T Consensus 11 a~~~~~~G~~l~~~g~~eeAi~~Y~kAL~l~p~~~~~~a~~~~~~~a~a~~n~g~al~~Lgr~~eAl~~~~kAL~l~n~~ 90 (159)
T 2hr2_A 11 AYLALSDAQRQLVAGEYDEAAANCRRAMEISHTMPPEEAFDHAGFDAFCHAGLAEALAGLRSFDEALHSADKALHYFNRR 90 (159)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTSCTTSCCCHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHhhCCCCcchhhhhhccchHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhhhcc
Confidence 456889999999999999999999999999999 444 9999999999999999999999999999
Q ss_pred ---hhhc
Q 014478 418 ---EAKK 421 (424)
Q Consensus 418 ---~~~~ 421 (424)
+|++
T Consensus 91 ~e~~pd~ 97 (159)
T 2hr2_A 91 GELNQDE 97 (159)
T ss_dssp CCTTSTH
T ss_pred ccCCCch
Confidence 9864
|
| >2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646} | Back alignment and structure |
|---|
Probab=99.00 E-value=1.6e-09 Score=99.17 Aligned_cols=102 Identities=14% Similarity=0.131 Sum_probs=88.9
Q ss_pred HHHHHHHHHhHHHhhCCHHHHHHHHHHHh---cCCCCCCH----HHHHHHHHHHHhcCChHHHHHHHHHHHhcCCC----
Q 014478 318 ETLNSKKHGDTAFRAKDFSTAIDCYTQFI---DGGTMVSP----TVYARRCLSYLMNDMPQEALGDAMQAQVVSPD---- 386 (424)
Q Consensus 318 ~~~~~~~~g~~~~~~g~~~~A~~~~~~ai---~~~p~~~~----~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~---- 386 (424)
.+..+...|..++..|+|++|++.|.+|+ +..|+ +. .+++|+|.+|..+|+|++|+..+++|+++.++
T Consensus 154 ~~~~~~~lg~~y~~~~~~~~A~~~~~kal~~~~~~~~-~~~~~~~~~~nlg~~y~~~~~y~~Al~~~~kal~~~~~~~~~ 232 (293)
T 2qfc_A 154 NLYIENAIANIYAENGYLKKGIDLFEQILKQLEALHD-NEEFDVKVRYNHAKALYLDSRYEESLYQVNKAIEISCRINSM 232 (293)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCC-CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTBC
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcCc-cccchHHHHHhHHHHHHHHhhHHHHHHHHHHHHHHHHhcCcH
Confidence 35577789999999999999999999999 44554 32 68999999999999999999999999988643
Q ss_pred --chHHHHHHHHHHHhCCChHHH-HHHHHHHHhchhh
Q 014478 387 --WPTALYLQAACLFSLGMENDA-RETLKDGTNLEAK 420 (424)
Q Consensus 387 --~~~a~~~~g~~~~~~~~~~~A-~~~~~~al~l~~~ 420 (424)
...+|+++|.+|..+|++++| ..+|++|+++...
T Consensus 233 ~~~~~~~~~lg~~y~~~g~~~~Ai~~~~~~Al~~~~~ 269 (293)
T 2qfc_A 233 ALIGQLYYQRGECLRKLEYEEAEIEDAYKKASFFFDI 269 (293)
T ss_dssp SSHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHH
Confidence 278999999999999999999 8889999987643
|
| >1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A* | Back alignment and structure |
|---|
Probab=99.00 E-value=2.9e-09 Score=106.46 Aligned_cols=103 Identities=4% Similarity=-0.142 Sum_probs=94.7
Q ss_pred HHHHHHHHHhHHHhhCC----------HHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHhcC--ChHHHHHHHHHHHhcCC
Q 014478 318 ETLNSKKHGDTAFRAKD----------FSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMND--MPQEALGDAMQAQVVSP 385 (424)
Q Consensus 318 ~~~~~~~~g~~~~~~g~----------~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~--~~~~A~~~~~~al~~~p 385 (424)
....+..+|......|+ +++|++.|+++++.+|+ ++.+|+.|+.++.+++ ++++|++.+++++++||
T Consensus 62 ~~taW~~R~~~l~~l~~~~~~~~~~~~~~~eL~~~~~~l~~~pK-~y~aW~hR~w~l~~l~~~~~~~el~~~~k~l~~d~ 140 (567)
T 1dce_A 62 FATLWNCRREVLQHLETEKSPEESAALVKAELGFLESCLRVNPK-SYGTWHHRCWLLSRLPEPNWARELELCARFLEADE 140 (567)
T ss_dssp CHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHTCSSCCHHHHHHHHHHHHHHCT
T ss_pred hHHHHHHHHHHHHhcccccchhhhhhhHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHcccccHHHHHHHHHHHHhhcc
Confidence 44566777777877777 99999999999999999 9999999999999999 67999999999999999
Q ss_pred CchHHHHHHHHHHHhCC-ChHHHHHHHHHHHhchhhc
Q 014478 386 DWPTALYLQAACLFSLG-MENDARETLKDGTNLEAKK 421 (424)
Q Consensus 386 ~~~~a~~~~g~~~~~~~-~~~~A~~~~~~al~l~~~~ 421 (424)
+|..||+++|.++..+| .+++|++++.++++.||.+
T Consensus 141 ~N~~aW~~R~~~l~~l~~~~~~el~~~~~~I~~~p~n 177 (567)
T 1dce_A 141 RNFHCWDYRRFVAAQAAVAPAEELAFTDSLITRNFSN 177 (567)
T ss_dssp TCHHHHHHHHHHHHHTCCCHHHHHHHHHTTTTTTCCC
T ss_pred ccccHHHHHHHHHHHcCCChHHHHHHHHHHHHHCCCC
Confidence 99999999999999999 9999999999999999975
|
| >2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio} | Back alignment and structure |
|---|
Probab=98.99 E-value=1.1e-09 Score=101.14 Aligned_cols=102 Identities=10% Similarity=0.004 Sum_probs=89.6
Q ss_pred HHHHHHHHHhHHHhhCCHHHHHHHHHHHhcCCCCC-----CHHHHHHHHHHHHhcCChHHHHHHHHHHHhcCCCc-----
Q 014478 318 ETLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMV-----SPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDW----- 387 (424)
Q Consensus 318 ~~~~~~~~g~~~~~~g~~~~A~~~~~~ai~~~p~~-----~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~----- 387 (424)
.+..+...|..+.. |++++|++.|++|+++.|.. ...++.++|.+|..+|++++|+..|++++++.|++
T Consensus 115 ~a~~~~~lg~~~~~-g~~~~A~~~~~~Al~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~ 193 (307)
T 2ifu_A 115 AAMALDRAGKLMEP-LDLSKAVHLYQQAAAVFENEERLRQAAELIGKASRLLVRQQKFDEAAASLQKEKSMYKEMENYPT 193 (307)
T ss_dssp HHHHHHHHHHHHTT-TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred HHHHHHHHHHHHHc-CCHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCChhH
Confidence 45567788999988 99999999999999987751 15789999999999999999999999999987655
Q ss_pred -hHHHHHHHHHHHhCCChHHHHHHHHHHHhchhhc
Q 014478 388 -PTALYLQAACLFSLGMENDARETLKDGTNLEAKK 421 (424)
Q Consensus 388 -~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~ 421 (424)
..+++++|.++..+|++++|+.+|++++ ++|..
T Consensus 194 ~~~~~~~~g~~~~~~g~~~~A~~~~~~al-~~p~~ 227 (307)
T 2ifu_A 194 CYKKCIAQVLVQLHRADYVAAQKCVRESY-SIPGF 227 (307)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHT-TSTTS
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHh-CCCCC
Confidence 3488899999999999999999999999 98863
|
| >3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus} | Back alignment and structure |
|---|
Probab=98.99 E-value=1.5e-09 Score=90.02 Aligned_cols=82 Identities=5% Similarity=-0.142 Sum_probs=76.4
Q ss_pred HHHHHHHHHhHHHhhCCHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhcCCCchHHHHHHHHH
Q 014478 318 ETLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAAC 397 (424)
Q Consensus 318 ~~~~~~~~g~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~ 397 (424)
....+...|..++..|+|++|++.|+++++++|+ +..+|+++|.+|..+|++++|+..|+++++++|++..+|+++|.+
T Consensus 44 ~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~l~ 122 (164)
T 3sz7_A 44 NPIYLSNRAAAYSASGQHEKAAEDAELATVVDPK-YSKAWSRLGLARFDMADYKGAKEAYEKGIEAEGNGGSDAMKRGLE 122 (164)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHSSSCCHHHHHHHH
T ss_pred CHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCchHHHHHHHHH
Confidence 3557788999999999999999999999999999 999999999999999999999999999999999999999998876
Q ss_pred HHh
Q 014478 398 LFS 400 (424)
Q Consensus 398 ~~~ 400 (424)
...
T Consensus 123 ~~~ 125 (164)
T 3sz7_A 123 TTK 125 (164)
T ss_dssp HHH
T ss_pred HHH
Confidence 543
|
| >1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A | Back alignment and structure |
|---|
Probab=98.99 E-value=2.1e-09 Score=101.87 Aligned_cols=93 Identities=14% Similarity=0.120 Sum_probs=87.7
Q ss_pred HHHHHHHHHHhHHHhhCCHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhcCCCchHHHHHHHH
Q 014478 317 QETLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAA 396 (424)
Q Consensus 317 ~~~~~~~~~g~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~ 396 (424)
..+..+...|..+++.|+|++|++.|++|++++|+ +..+++++|.+|..+|++++|+..|++|++++|++..++..++.
T Consensus 271 ~~~~~~~nla~~~~~~g~~~~A~~~~~~al~~~p~-~~~a~~~lg~~~~~~g~~~eA~~~l~~Al~l~P~~~~~~~~l~~ 349 (370)
T 1ihg_A 271 VALSCVLNIGACKLKMSDWQGAVDSCLEALEIDPS-NTKALYRRAQGWQGLKEYDQALADLKKAQEIAPEDKAIQAELLK 349 (370)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhccCHHHHHHHHHHHHHhCch-hHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHH
Confidence 34567788999999999999999999999999999 99999999999999999999999999999999999999999999
Q ss_pred HHHhCCChHHHHHH
Q 014478 397 CLFSLGMENDARET 410 (424)
Q Consensus 397 ~~~~~~~~~~A~~~ 410 (424)
++..++++++|.+.
T Consensus 350 ~~~~~~~~~~a~k~ 363 (370)
T 1ihg_A 350 VKQKIKAQKDKEKA 363 (370)
T ss_dssp HHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHH
Confidence 99999999988764
|
| >3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus} | Back alignment and structure |
|---|
Probab=98.99 E-value=1.3e-09 Score=89.08 Aligned_cols=99 Identities=11% Similarity=0.113 Sum_probs=66.9
Q ss_pred HHHHHHhHHHhhCCHHHHHHHHHHHhcCCCCC-----CHHHHHHHHHHHHhcCChHHHHHHHHHHHhcCCCc------hH
Q 014478 321 NSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMV-----SPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDW------PT 389 (424)
Q Consensus 321 ~~~~~g~~~~~~g~~~~A~~~~~~ai~~~p~~-----~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~------~~ 389 (424)
.+...|..++..|++++|++.|.++++..+.. ...++.++|.++..+|++++|+..+++++++.++. ..
T Consensus 51 ~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~ 130 (164)
T 3ro3_A 51 AYSNLGNAYIFLGEFETASEYYKKTLLLARQLKDRAVEAQSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQELKDRIGEGR 130 (164)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHccchHhHHH
Confidence 45566777777777777777777777654430 14566777777777777777777777777664433 34
Q ss_pred HHHHHHHHHHhCCChHHHHHHHHHHHhchh
Q 014478 390 ALYLQAACLFSLGMENDARETLKDGTNLEA 419 (424)
Q Consensus 390 a~~~~g~~~~~~~~~~~A~~~~~~al~l~~ 419 (424)
+++++|.++..+|++++|+..+++++++..
T Consensus 131 ~~~~la~~~~~~g~~~~A~~~~~~a~~~~~ 160 (164)
T 3ro3_A 131 ACWSLGNAYTALGNHDQAMHFAEKHLEISR 160 (164)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHccCHHHHHHHHHHHHHHHH
Confidence 667777777777777777777777776654
|
| >3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A* | Back alignment and structure |
|---|
Probab=98.99 E-value=1.6e-09 Score=98.95 Aligned_cols=95 Identities=9% Similarity=-0.049 Sum_probs=89.0
Q ss_pred HHHHHHhHHHhhCCHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhcCCCc--hHHHHHHHHHH
Q 014478 321 NSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDW--PTALYLQAACL 398 (424)
Q Consensus 321 ~~~~~g~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~--~~a~~~~g~~~ 398 (424)
.....+..+.+.++.++|++.|+++++.+|+ +..+++++|.+|...|++++|+..|.++++.+|++ ..++.++|.++
T Consensus 187 ~~~~~~~~l~~~~~~~~a~~~l~~al~~~P~-~~~~~~~la~~l~~~g~~~~A~~~l~~~l~~~p~~~~~~a~~~l~~~~ 265 (287)
T 3qou_A 187 QGLVAQIELLXQAADTPEIQQLQQQVAENPE-DAALATQLALQLHQVGRNEEALELLFGHLRXDLTAADGQTRXTFQEIL 265 (287)
T ss_dssp HHHHHHHHHHHHHTSCHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTGGGGHHHHHHHHHH
T ss_pred HHHHHHHHHHhhcccCccHHHHHHHHhcCCc-cHHHHHHHHHHHHHcccHHHHHHHHHHHHhcccccccchHHHHHHHHH
Confidence 3445666677889999999999999999999 99999999999999999999999999999999999 99999999999
Q ss_pred HhCCChHHHHHHHHHHHh
Q 014478 399 FSLGMENDARETLKDGTN 416 (424)
Q Consensus 399 ~~~~~~~~A~~~~~~al~ 416 (424)
..+|+.++|+..|++++.
T Consensus 266 ~~~g~~~~a~~~~r~al~ 283 (287)
T 3qou_A 266 AALGTGDALASXYRRQLY 283 (287)
T ss_dssp HHHCTTCHHHHHHHHHHH
T ss_pred HHcCCCCcHHHHHHHHHH
Confidence 999999999999999985
|
| >1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1 | Back alignment and structure |
|---|
Probab=98.99 E-value=1.5e-09 Score=85.39 Aligned_cols=67 Identities=16% Similarity=-0.053 Sum_probs=64.0
Q ss_pred HHHHHHHHHHHhcCChHHHHHHHHHHHhcCCCchHHHHHHHHHHHhCCChHHHHHHHHHHHhchhhc
Q 014478 355 TVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAACLFSLGMENDARETLKDGTNLEAKK 421 (424)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~ 421 (424)
..++.+|.++.+.|++++|+..++++++++|+++.+|+.+|.++..+|++++|+..|++|++++|..
T Consensus 18 ~~~~~~g~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~ 84 (121)
T 1hxi_A 18 ENPMEEGLSMLKLANLAEAALAFEAVCQKEPEREEAWRSLGLTQAENEKDGLAIIALNHARMLDPKD 84 (121)
T ss_dssp SCHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC
T ss_pred hhHHHHHHHHHHcCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC
Confidence 4578899999999999999999999999999999999999999999999999999999999999974
|
| >3dra_A Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha; geranylgeranyltrasferase, ggtase, ggtase-I, PGGT, prenyltransferase, farnesyltransferase; HET: B3P GRG; 1.80A {Candida albicans} | Back alignment and structure |
|---|
Probab=98.99 E-value=3.9e-09 Score=96.74 Aligned_cols=91 Identities=9% Similarity=-0.076 Sum_probs=85.3
Q ss_pred HhhCCH-HHHHHHHHHHhcCCCCCCHHHHHHHHHHHHhcC--ChHHHHHHHHHHHhcCCCchHHHHHHHHHH----HhC-
Q 014478 330 FRAKDF-STAIDCYTQFIDGGTMVSPTVYARRCLSYLMND--MPQEALGDAMQAQVVSPDWPTALYLQAACL----FSL- 401 (424)
Q Consensus 330 ~~~g~~-~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~--~~~~A~~~~~~al~~~p~~~~a~~~~g~~~----~~~- 401 (424)
.+.|.+ ++|++.++++|.++|+ +..+|+.|+.++..++ ++++++..++++|..+|++..+|+.++.++ ..+
T Consensus 43 ~~~~e~s~~aL~~t~~~L~~nP~-~~taWn~R~~~L~~l~~~~~~eeL~~~~~~L~~nPk~y~aW~~R~~iL~~~~~~l~ 121 (306)
T 3dra_A 43 MKAEEYSERALHITELGINELAS-HYTIWIYRFNILKNLPNRNLYDELDWCEEIALDNEKNYQIWNYRQLIIGQIMELNN 121 (306)
T ss_dssp HHTTCCSHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHTCTTSCHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHHHHHHTT
T ss_pred HHcCCCCHHHHHHHHHHHHHCcH-HHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHCcccHHHHHHHHHHHHHHHHhcc
Confidence 444554 6899999999999999 9999999999999999 999999999999999999999999999999 777
Q ss_pred --CChHHHHHHHHHHHhchhhc
Q 014478 402 --GMENDARETLKDGTNLEAKK 421 (424)
Q Consensus 402 --~~~~~A~~~~~~al~l~~~~ 421 (424)
++++++++.+.++++.+|++
T Consensus 122 ~~~~~~~EL~~~~~~l~~~pkn 143 (306)
T 3dra_A 122 NDFDPYREFDILEAMLSSDPKN 143 (306)
T ss_dssp TCCCTHHHHHHHHHHHHHCTTC
T ss_pred ccCCHHHHHHHHHHHHHhCCCC
Confidence 89999999999999999985
|
| >2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis} | Back alignment and structure |
|---|
Probab=98.98 E-value=1.5e-09 Score=82.88 Aligned_cols=72 Identities=13% Similarity=0.063 Sum_probs=69.1
Q ss_pred CCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhcCCCchHHHHHHHHHHHhCCChHHHHHHHHHHHhchhh
Q 014478 348 GGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAACLFSLGMENDARETLKDGTNLEAK 420 (424)
Q Consensus 348 ~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~ 420 (424)
++|+ +..++.++|.++...|++++|+..++++++++|++..+++++|.++..+|++++|+..|+++++++|.
T Consensus 1 l~p~-~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~ 72 (112)
T 2kck_A 1 MVDQ-NPEEYYLEGVLQYDAGNYTESIDLFEKAIQLDPEESKYWLMKGKALYNLERYEEAVDCYNYVINVIED 72 (112)
T ss_dssp CCCS-STTGGGGHHHHHHSSCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTSCC
T ss_pred CCCC-cHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCcc
Confidence 3677 88899999999999999999999999999999999999999999999999999999999999999986
|
| >3q7a_A Farnesyltransferase alpha subunit; protein prenyltransferase, transferase-transferase inhibitor; HET: SUC 3FX FPP 778; 2.00A {Cryptococcus neoformans} PDB: 3q73_A* 3q78_A* 3q79_A* 3q75_A* 3q7f_A* 3sfx_A* 3sfy_A* | Back alignment and structure |
|---|
Probab=98.98 E-value=4.9e-09 Score=97.19 Aligned_cols=104 Identities=7% Similarity=-0.061 Sum_probs=94.3
Q ss_pred HHHHHHHHHHhHHHhhC-CHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHhc-C-ChHHHHHHHHHHHhcCCCchHHHHH
Q 014478 317 QETLNSKKHGDTAFRAK-DFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMN-D-MPQEALGDAMQAQVVSPDWPTALYL 393 (424)
Q Consensus 317 ~~~~~~~~~g~~~~~~g-~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~-~-~~~~A~~~~~~al~~~p~~~~a~~~ 393 (424)
.....+..++......| +++++++.++++|..+|+ +..+|+.|+.++..+ + +++++++.++++|+.+|+|..||+.
T Consensus 86 ~~ytaWn~R~~iL~~l~~~l~eEL~~~~~~L~~nPK-ny~aW~hR~wlL~~l~~~~~~~EL~~~~k~L~~dpkNy~AW~~ 164 (349)
T 3q7a_A 86 AHYTVWQYRFSLLTSLNKSLEDELRLMNEFAVQNLK-SYQVWHHRLLLLDRISPQDPVSEIEYIHGSLLPDPKNYHTWAY 164 (349)
T ss_dssp TCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHTTCC-CHHHHHHHHHHHHHHCCSCCHHHHHHHHHHTSSCTTCHHHHHH
T ss_pred hhHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhCCC-cHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHhCCCCHHHHHH
Confidence 34456777788888888 599999999999999999 999999999999988 7 8999999999999999999999999
Q ss_pred HHHHHHhCCChH--------HHHHHHHHHHhchhhc
Q 014478 394 QAACLFSLGMEN--------DARETLKDGTNLEAKK 421 (424)
Q Consensus 394 ~g~~~~~~~~~~--------~A~~~~~~al~l~~~~ 421 (424)
++.++..+|.++ ++++++.++++.||.+
T Consensus 165 R~wvl~~l~~~~~~~~~~~~eELe~~~k~I~~dp~N 200 (349)
T 3q7a_A 165 LHWLYSHFSTLGRISEAQWGSELDWCNEMLRVDGRN 200 (349)
T ss_dssp HHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHCTTC
T ss_pred HHHHHHHhccccccchhhHHHHHHHHHHHHHhCCCC
Confidence 999999999888 9999999999999875
|
| >3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.98 E-value=1.1e-09 Score=100.03 Aligned_cols=104 Identities=11% Similarity=-0.038 Sum_probs=93.7
Q ss_pred HHHHHHHHHHHhHHHhhCCHHHHHHHHHHHhcC--------CCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhc----
Q 014478 316 MQETLNSKKHGDTAFRAKDFSTAIDCYTQFIDG--------GTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVV---- 383 (424)
Q Consensus 316 ~~~~~~~~~~g~~~~~~g~~~~A~~~~~~ai~~--------~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~---- 383 (424)
...+..+...|..++..|++++|++.|+++++. .|. ...++.++|.+|..+|++++|+..+++++++
T Consensus 150 ~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~-~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~ 228 (311)
T 3nf1_A 150 PDVAKQLNNLALLCQNQGKYEEVEYYYQRALEIYQTKLGPDDPN-VAKTKNNLASCYLKQGKFKQAETLYKEILTRAHER 228 (311)
T ss_dssp HHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHTSCTTCHH-HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHhCCCCHH-HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHh
Confidence 344556778999999999999999999999987 566 6788999999999999999999999999974
Q ss_pred ---------------------------------------------CCCchHHHHHHHHHHHhCCChHHHHHHHHHHHhch
Q 014478 384 ---------------------------------------------SPDWPTALYLQAACLFSLGMENDARETLKDGTNLE 418 (424)
Q Consensus 384 ---------------------------------------------~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~ 418 (424)
+|..+.+++.+|.+|..+|++++|+..|++|+++.
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~l~ 308 (311)
T 3nf1_A 229 EFGSVDDENKPIWMHAEEREECKGKQKDGTSFGEYGGWYKACKVDSPTVTTTLKNLGALYRRQGKFEAAETLEEAAMRSR 308 (311)
T ss_dssp HHC------CCHHHHHHHHHHC-------CCSCCCC---------CHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHH
T ss_pred cCCCCCcchHHHHHHHHHHHHhcCchhhHHHHHHHHHHHhhcCCCCchHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHh
Confidence 57788999999999999999999999999999998
Q ss_pred hh
Q 014478 419 AK 420 (424)
Q Consensus 419 ~~ 420 (424)
|+
T Consensus 309 ~~ 310 (311)
T 3nf1_A 309 KQ 310 (311)
T ss_dssp C-
T ss_pred hc
Confidence 75
|
| >2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio} | Back alignment and structure |
|---|
Probab=98.98 E-value=1.1e-09 Score=101.04 Aligned_cols=103 Identities=10% Similarity=-0.076 Sum_probs=90.6
Q ss_pred HHHHHHHHHhHHHhhCCHHHHHHHHHHHhcCCCC-----CCHHHHHHHHHHHHhcCChHHHHHHHHHHHhcCCCc-----
Q 014478 318 ETLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTM-----VSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDW----- 387 (424)
Q Consensus 318 ~~~~~~~~g~~~~~~g~~~~A~~~~~~ai~~~p~-----~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~----- 387 (424)
.+..+...|..+...|++++|++.|++|+++.+. ....++.++|.+|.. |++++|+..|++|+++.|..
T Consensus 75 ~a~~~~~lg~~~~~~g~~~~A~~~~~~Al~l~~~~g~~~~~a~~~~~lg~~~~~-g~~~~A~~~~~~Al~~~~~~~~~~~ 153 (307)
T 2ifu_A 75 AAKAFEQAGMMLKDLQRMPEAVQYIEKASVMYVENGTPDTAAMALDRAGKLMEP-LDLSKAVHLYQQAAAVFENEERLRQ 153 (307)
T ss_dssp HHHHHHHHHHHHHHTTCGGGGHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHTT-TCHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred HHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHc-CCHHHHHHHHHHHHHHHHhCCChhH
Confidence 4557778899999999999999999999988543 124688999999999 99999999999999998764
Q ss_pred -hHHHHHHHHHHHhCCChHHHHHHHHHHHhchhhc
Q 014478 388 -PTALYLQAACLFSLGMENDARETLKDGTNLEAKK 421 (424)
Q Consensus 388 -~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~ 421 (424)
..++.++|.+|..+|+|++|+.+|++++++.++.
T Consensus 154 ~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~ 188 (307)
T 2ifu_A 154 AAELIGKASRLLVRQQKFDEAAASLQKEKSMYKEM 188 (307)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHc
Confidence 6789999999999999999999999999988754
|
| >3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans} | Back alignment and structure |
|---|
Probab=98.97 E-value=1.2e-09 Score=90.35 Aligned_cols=88 Identities=9% Similarity=-0.053 Sum_probs=78.0
Q ss_pred HHHHHHHHHhHHHhhCCHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhcCCCch-HHHHHHHH
Q 014478 318 ETLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWP-TALYLQAA 396 (424)
Q Consensus 318 ~~~~~~~~g~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~-~a~~~~g~ 396 (424)
.+..+...|..+++.|+|++|+..++++|+++|+ +..+|+++|.+|..+|++++|+.+|++|++++|++. .....++.
T Consensus 62 ~~~~~~nla~~~~~~~~~~~A~~~~~~al~~~p~-~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~~l~~ 140 (162)
T 3rkv_A 62 NIPLYANMSQCYLNIGDLHEAEETSSEVLKREET-NEKALFRRAKARIAAWKLDEAEEDLKLLLRNHPAAASVVAREMKI 140 (162)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCGGGHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCcHHHHHHHHHHHHhcCCc-chHHHHHHHHHHHHHhcHHHHHHHHHHHHhcCCCCHHHHHHHHHH
Confidence 3456778999999999999999999999999999 999999999999999999999999999999999999 56777777
Q ss_pred HHHhCCChHH
Q 014478 397 CLFSLGMEND 406 (424)
Q Consensus 397 ~~~~~~~~~~ 406 (424)
+...++++++
T Consensus 141 ~~~~~~~~~~ 150 (162)
T 3rkv_A 141 VTERRAEKKA 150 (162)
T ss_dssp HHHHHHHHTT
T ss_pred HHHHHHHHHH
Confidence 7766554433
|
| >3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A | Back alignment and structure |
|---|
Probab=98.97 E-value=1.8e-09 Score=98.75 Aligned_cols=101 Identities=8% Similarity=-0.033 Sum_probs=86.3
Q ss_pred HHHHHHhHHHhhCCHHHHHHHHHHHhcCCCCC-C----HHHHHHHHHHHHhcCChHHHHHHHHHHHh-------cCCCch
Q 014478 321 NSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMV-S----PTVYARRCLSYLMNDMPQEALGDAMQAQV-------VSPDWP 388 (424)
Q Consensus 321 ~~~~~g~~~~~~g~~~~A~~~~~~ai~~~p~~-~----~~~~~~~~~~~~~~~~~~~A~~~~~~al~-------~~p~~~ 388 (424)
.+...|..+...|++++|++.|.+|++..+.. + ..+++++|.+|..+|++++|+..|++|++ ..+...
T Consensus 117 ~~~~l~~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~ 196 (293)
T 3u3w_A 117 WQYYVAAYVLKKVDYEYCILELKKLLNQQLTGIDVYQNLYIENAIANIYAENGYLKKGIDLFEQILKQLEALHDNEEFDV 196 (293)
T ss_dssp HHHHHHHHHTTSSCHHHHHHHHHHHHHTCCCCSCTTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSSCCHHHHH
T ss_pred HHHHHHHHHHcccCHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcccchhHHH
Confidence 44457888899999999999999999875441 1 34799999999999999999999999994 334456
Q ss_pred HHHHHHHHHHHhCCChHHHHHHHHHHHhchhhc
Q 014478 389 TALYLQAACLFSLGMENDARETLKDGTNLEAKK 421 (424)
Q Consensus 389 ~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~ 421 (424)
.+++++|.+|..+|+|++|+.++++|+++.++.
T Consensus 197 ~~~~nlg~~y~~~~~y~~A~~~~~~al~~~~~~ 229 (293)
T 3u3w_A 197 KVRYNHAKALYLDSRYEESLYQVNKAIEISCRI 229 (293)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHc
Confidence 699999999999999999999999999988754
|
| >3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus} | Back alignment and structure |
|---|
Probab=98.97 E-value=2.8e-09 Score=98.09 Aligned_cols=103 Identities=14% Similarity=0.111 Sum_probs=94.4
Q ss_pred HHHHHHHHHhHHHhhCCHHHHHHHHHHHhcCCCCCC----HHHHHHHHHHHHhcCChHHHHHHHHHHHhc------CCCc
Q 014478 318 ETLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVS----PTVYARRCLSYLMNDMPQEALGDAMQAQVV------SPDW 387 (424)
Q Consensus 318 ~~~~~~~~g~~~~~~g~~~~A~~~~~~ai~~~p~~~----~~~~~~~~~~~~~~~~~~~A~~~~~~al~~------~p~~ 387 (424)
....+...|..++..|++++|+..|+++++.+|+ + ..++.++|.+|...|++++|+..+++++++ .|..
T Consensus 4 ~~~~l~~~g~~~~~~g~~~~A~~~~~~al~~~~~-~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~ 82 (338)
T 3ro2_A 4 SCLELALEGERLCKSGDCRAGVSFFEAAVQVGTE-DLKTLSAIYSQLGNAYFYLHDYAKALEYHHHDLTLARTIGDQLGE 82 (338)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCS-CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHH
T ss_pred HHHHHHHHHHHHHHhccHHHHHHHHHHHHhhCcc-cHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhhcccccHHH
Confidence 3457788999999999999999999999999998 6 478899999999999999999999999988 6677
Q ss_pred hHHHHHHHHHHHhCCChHHHHHHHHHHHhchhhc
Q 014478 388 PTALYLQAACLFSLGMENDARETLKDGTNLEAKK 421 (424)
Q Consensus 388 ~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~ 421 (424)
..+++.+|.++..+|++++|+..|++++++.++.
T Consensus 83 ~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~ 116 (338)
T 3ro2_A 83 AKASGNLGNTLKVLGNFDEAIVCCQRHLDISREL 116 (338)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHh
Confidence 8899999999999999999999999999987753
|
| >2ond_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 2.80A {Mus musculus} SCOP: a.118.8.7 | Back alignment and structure |
|---|
Probab=98.97 E-value=4.2e-09 Score=97.09 Aligned_cols=96 Identities=14% Similarity=0.013 Sum_probs=88.1
Q ss_pred HHHHHHhHHHhhCCHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHH-hcCChHHHHHHHHHHHhcCCCchHHHHHHHHHHH
Q 014478 321 NSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYL-MNDMPQEALGDAMQAQVVSPDWPTALYLQAACLF 399 (424)
Q Consensus 321 ~~~~~g~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~-~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~ 399 (424)
.+...|..+.+.|++++|++.|++|++.+|. ...+|...+.... .+|++++|+..|+++++++|+++.+|..+|.++.
T Consensus 136 ~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~-~~~~~~~~a~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~ 214 (308)
T 2ond_A 136 VYIQYMKFARRAEGIKSGRMIFKKAREDART-RHHVYVTAALMEYYCSKDKSVAFKIFELGLKKYGDIPEYVLAYIDYLS 214 (308)
T ss_dssp HHHHHHHHHHHHHCHHHHHHHHHHHHTSTTC-CTHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHhcCCC-CHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHH
Confidence 6778899999999999999999999999998 7888876665543 3799999999999999999999999999999999
Q ss_pred hCCChHHHHHHHHHHHhc
Q 014478 400 SLGMENDARETLKDGTNL 417 (424)
Q Consensus 400 ~~~~~~~A~~~~~~al~l 417 (424)
.+|++++|+..|++|++.
T Consensus 215 ~~g~~~~A~~~~~~al~~ 232 (308)
T 2ond_A 215 HLNEDNNTRVLFERVLTS 232 (308)
T ss_dssp TTCCHHHHHHHHHHHHHS
T ss_pred HCCCHHHHHHHHHHHHhc
Confidence 999999999999999995
|
| >4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster} | Back alignment and structure |
|---|
Probab=98.96 E-value=2.4e-09 Score=102.45 Aligned_cols=102 Identities=14% Similarity=0.098 Sum_probs=94.9
Q ss_pred HHHHHHHHHHhHHHhhCCHHHHHHHHHHHhcCCCCCCH----HHHHHHHHHHHhcCChHHHHHHHHHHHhc------CCC
Q 014478 317 QETLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSP----TVYARRCLSYLMNDMPQEALGDAMQAQVV------SPD 386 (424)
Q Consensus 317 ~~~~~~~~~g~~~~~~g~~~~A~~~~~~ai~~~p~~~~----~~~~~~~~~~~~~~~~~~A~~~~~~al~~------~p~ 386 (424)
..+..+...|..++..|+|++|++.|+++++.+|+ +. .++.++|.+|..+|++++|+..+++++++ +|.
T Consensus 46 ~~~~~l~~~g~~~~~~g~~~~A~~~~~~al~~~~~-~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~ 124 (411)
T 4a1s_A 46 SMCLELALEGERLCNAGDCRAGVAFFQAAIQAGTE-DLRTLSAIYSQLGNAYFYLGDYNKAMQYHKHDLTLAKSMNDRLG 124 (411)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCS-CHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred HHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHhccc-ChhHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHccCchH
Confidence 45667789999999999999999999999999998 65 58999999999999999999999999998 788
Q ss_pred chHHHHHHHHHHHhCCChHHHHHHHHHHHhchh
Q 014478 387 WPTALYLQAACLFSLGMENDARETLKDGTNLEA 419 (424)
Q Consensus 387 ~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~ 419 (424)
...+++++|.+|..+|++++|+..|++++++.+
T Consensus 125 ~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~ 157 (411)
T 4a1s_A 125 EAKSSGNLGNTLKVMGRFDEAAICCERHLTLAR 157 (411)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
Confidence 899999999999999999999999999999854
|
| >3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=98.96 E-value=2.3e-09 Score=101.85 Aligned_cols=104 Identities=15% Similarity=0.123 Sum_probs=92.7
Q ss_pred HHHHHHHHHHhHHHhhCCHHHHHHHHHHHhcCCCCC-----CHHHHHHHHHHHHhcCChHHHHHHHHHHHh-----cC-C
Q 014478 317 QETLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMV-----SPTVYARRCLSYLMNDMPQEALGDAMQAQV-----VS-P 385 (424)
Q Consensus 317 ~~~~~~~~~g~~~~~~g~~~~A~~~~~~ai~~~p~~-----~~~~~~~~~~~~~~~~~~~~A~~~~~~al~-----~~-p 385 (424)
..+..+...|..+...|+|++|++.|.+|+++.+.. ...++.++|.+|..+|++++|+..+++|++ .+ |
T Consensus 182 ~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~~~~~~~ 261 (383)
T 3ulq_A 182 RLLQCHSLFATNFLDLKQYEDAISHFQKAYSMAEAEKQPQLMGRTLYNIGLCKNSQSQYEDAIPYFKRAIAVFEESNILP 261 (383)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCGG
T ss_pred HHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhhccch
Confidence 345567788999999999999999999999886541 225899999999999999999999999999 57 8
Q ss_pred CchHHHHHHHHHHHhCCChHHHHHHHHHHHhchhh
Q 014478 386 DWPTALYLQAACLFSLGMENDARETLKDGTNLEAK 420 (424)
Q Consensus 386 ~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~ 420 (424)
..+.+++++|.++..+|++++|+..|++|+++.++
T Consensus 262 ~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~ 296 (383)
T 3ulq_A 262 SLPQAYFLITQIHYKLGKIDKAHEYHSKGMAYSQK 296 (383)
T ss_dssp GHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
Confidence 89999999999999999999999999999998654
|
| >1ouv_A Conserved hypothetical secreted protein; TPR repeat, HCP repeat, cysteine rich protein, loop-helix-TU repeat protein, hydrolase; 2.00A {Helicobacter pylori} SCOP: a.118.18.1 | Back alignment and structure |
|---|
Probab=98.96 E-value=7e-09 Score=93.51 Aligned_cols=97 Identities=13% Similarity=0.046 Sum_probs=82.5
Q ss_pred HHHHHHHHHhHHHh----hCCHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHh----cCChHHHHHHHHHHHhcCCCchH
Q 014478 318 ETLNSKKHGDTAFR----AKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLM----NDMPQEALGDAMQAQVVSPDWPT 389 (424)
Q Consensus 318 ~~~~~~~~g~~~~~----~g~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~----~~~~~~A~~~~~~al~~~p~~~~ 389 (424)
....+...|..+.. .+++++|++.|+++++.+ +..+++++|.+|.. .+++++|+..|++|++.+ ++.
T Consensus 37 ~~~a~~~lg~~~~~g~~~~~~~~~A~~~~~~a~~~~---~~~a~~~lg~~~~~g~~~~~~~~~A~~~~~~a~~~~--~~~ 111 (273)
T 1ouv_A 37 ENSGCFNLGVLYYQGQGVEKNLKKAASFYAKACDLN---YSNGCHLLGNLYYSGQGVSQNTNKALQYYSKACDLK--YAE 111 (273)
T ss_dssp CHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTT---CHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTT--CHH
T ss_pred CHHHHHHHHHHHHcCCCcCCCHHHHHHHHHHHHHCC---CHHHHHHHHHHHhCCCCcccCHHHHHHHHHHHHHcC--Ccc
Confidence 34566778888888 889999999999998874 67888889999988 899999999999998874 888
Q ss_pred HHHHHHHHHHh----CCChHHHHHHHHHHHhchh
Q 014478 390 ALYLQAACLFS----LGMENDARETLKDGTNLEA 419 (424)
Q Consensus 390 a~~~~g~~~~~----~~~~~~A~~~~~~al~l~~ 419 (424)
+++++|.+|.. .+++++|+..|++|+++++
T Consensus 112 a~~~lg~~~~~~~~~~~~~~~A~~~~~~a~~~~~ 145 (273)
T 1ouv_A 112 GCASLGGIYHDGKVVTRDFKKAVEYFTKACDLND 145 (273)
T ss_dssp HHHHHHHHHHHCSSSCCCHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHcCCCcccCHHHHHHHHHHHHhcCc
Confidence 99999999988 8999999999999988764
|
| >2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=98.96 E-value=2.5e-09 Score=105.13 Aligned_cols=102 Identities=13% Similarity=0.020 Sum_probs=97.4
Q ss_pred HHHHHHHHhHHHhhCCHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhcCCCchHHHHHHHHHH
Q 014478 319 TLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAACL 398 (424)
Q Consensus 319 ~~~~~~~g~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~ 398 (424)
...+...|..++..|++++|+..|.++++.+|. +..++.++|.+|...|++++|+..++++++.+|+++.+++.+|.++
T Consensus 304 ~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~ 382 (514)
T 2gw1_A 304 SSVYYHRGQMNFILQNYDQAGKDFDKAKELDPE-NIFPYIQLACLAYRENKFDDCETLFSEAKRKFPEAPEVPNFFAEIL 382 (514)
T ss_dssp THHHHHHHHHHHHTTCTTHHHHHHHHHHHTCSS-CSHHHHHHHHHTTTTTCHHHHHHHHHHHHHHSTTCSHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHHhChh-hHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHcccCHHHHHHHHHHH
Confidence 446678899999999999999999999999999 8999999999999999999999999999999999999999999999
Q ss_pred HhCCChHHHHHHHHHHHhchhhc
Q 014478 399 FSLGMENDARETLKDGTNLEAKK 421 (424)
Q Consensus 399 ~~~~~~~~A~~~~~~al~l~~~~ 421 (424)
..+|++++|+..|+++++++|..
T Consensus 383 ~~~~~~~~A~~~~~~a~~~~~~~ 405 (514)
T 2gw1_A 383 TDKNDFDKALKQYDLAIELENKL 405 (514)
T ss_dssp HHTTCHHHHHHHHHHHHHHHHTS
T ss_pred HHCCCHHHHHHHHHHHHHhhhcc
Confidence 99999999999999999999875
|
| >3bee_A Putative YFRE protein; putaive YFRE protein, structural GE PSI-2, protein structure initiative; 2.15A {Vibrio parahaemolyticus rimd 2210633} | Back alignment and structure |
|---|
Probab=98.94 E-value=4.7e-09 Score=78.07 Aligned_cols=71 Identities=18% Similarity=-0.020 Sum_probs=66.0
Q ss_pred CCCCCHHHHHHHHHHHHhcCC---hHHHHHHHHHHHhcCCCchHHHHHHHHHHHhCCChHHHHHHHHHHHhchhh
Q 014478 349 GTMVSPTVYARRCLSYLMNDM---PQEALGDAMQAQVVSPDWPTALYLQAACLFSLGMENDARETLKDGTNLEAK 420 (424)
Q Consensus 349 ~p~~~~~~~~~~~~~~~~~~~---~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~ 420 (424)
+|+ ++.++..+|.++...++ .++|...+++|+++||+++.+++.+|.++++.|+|++|+.+|+++++.+|.
T Consensus 2 ~p~-~~~~~~~~a~al~~~~~~~~~~~A~~~l~~AL~~dp~~~rA~~~lg~~~~~~g~y~~Ai~~w~~~l~~~p~ 75 (93)
T 3bee_A 2 NAV-TATQLAAKATTLYYLHKQAMTDEVSLLLEQALQLEPYNEAALSLIANDHFISFRFQEAIDTWVLLLDSNDP 75 (93)
T ss_dssp CCC-CHHHHHHHHHHHHHTTTTCCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTCCCT
T ss_pred CCC-CHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHCcCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCC
Confidence 577 89999999999975555 799999999999999999999999999999999999999999999999987
|
| >2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
Probab=98.94 E-value=3.7e-09 Score=106.31 Aligned_cols=100 Identities=12% Similarity=-0.089 Sum_probs=78.6
Q ss_pred HHHHHHHhHHHhhCCHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhcCCCchHHHHHHHHHHH
Q 014478 320 LNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAACLF 399 (424)
Q Consensus 320 ~~~~~~g~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~ 399 (424)
..+...|..+.+.|++++|++.|+++++..|+ +..++..++.+|.+.|++++|+..|+++++++|+++.+|+.+|.+|.
T Consensus 408 ~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~-~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~ 486 (597)
T 2xpi_A 408 PAWIGFAHSFAIEGEHDQAISAYTTAARLFQG-THLPYLFLGMQHMQLGNILLANEYLQSSYALFQYDPLLLNELGVVAF 486 (597)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHTTTT-CSHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcc-chHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHHHHHHHHHH
Confidence 35556677777788888888888888888887 77777888888888888888888888888888888888888888888
Q ss_pred hCCChHHHHHHHHHHHhchhh
Q 014478 400 SLGMENDARETLKDGTNLEAK 420 (424)
Q Consensus 400 ~~~~~~~A~~~~~~al~l~~~ 420 (424)
..|++++|++.|++++++.|+
T Consensus 487 ~~g~~~~A~~~~~~~~~~~~~ 507 (597)
T 2xpi_A 487 NKSDMQTAINHFQNALLLVKK 507 (597)
T ss_dssp HTTCHHHHHHHHHHHHHHHHH
T ss_pred HhCCHHHHHHHHHHHHHhhhc
Confidence 888888888888888877543
|
| >3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B* | Back alignment and structure |
|---|
Probab=98.94 E-value=4e-09 Score=84.22 Aligned_cols=74 Identities=12% Similarity=0.051 Sum_probs=68.6
Q ss_pred cCCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhcCCCchHHHHHHHHHHHhCCChHHHHHHHHHHHhchhhc
Q 014478 347 DGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAACLFSLGMENDARETLKDGTNLEAKK 421 (424)
Q Consensus 347 ~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~ 421 (424)
..+|. ....+..+|.++...|++++|+..|++++.++|+++.+++++|.++..+|++++|+..|+++++++|.+
T Consensus 3 ~~~~~-~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~~ 76 (137)
T 3q49_B 3 HMKSP-SAQELKEQGNRLFVGRKYPEAAACYGRAITRNPLVAVYYTNRALCYLKMQQPEQALADCRRALELDGQS 76 (137)
T ss_dssp ---CC-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC
T ss_pred CCccc-cHHHHHHHHHHHHHhCcHHHHHHHHHHHHhhCcCcHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCchh
Confidence 34566 889999999999999999999999999999999999999999999999999999999999999999864
|
| >2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis} | Back alignment and structure |
|---|
Probab=98.93 E-value=2.2e-09 Score=80.68 Aligned_cols=66 Identities=15% Similarity=0.094 Sum_probs=62.6
Q ss_pred HHHHHHHHHhcCChHHHHHHHHHHHhcCCCchH-HHHHHHHHHHhCCChHHHHHHHHHHHhchhhcC
Q 014478 357 YARRCLSYLMNDMPQEALGDAMQAQVVSPDWPT-ALYLQAACLFSLGMENDARETLKDGTNLEAKKN 422 (424)
Q Consensus 357 ~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~-a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~~ 422 (424)
.+++|.++...|++++|+..++++++++|+++. +++++|.++..+|++++|+..|+++++++|...
T Consensus 3 ~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~ 69 (99)
T 2kc7_A 3 QLKTIKELINQGDIENALQALEEFLQTEPVGKDEAYYLMGNAYRKLGDWQKALNNYQSAIELNPDSP 69 (99)
T ss_dssp THHHHHHHHHHTCHHHHHHHHHHHHHHCSSTHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTST
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCcH
Confidence 457899999999999999999999999999999 999999999999999999999999999999753
|
| >4f3v_A ESX-1 secretion system protein ECCA1; tetratricopeptide repeat, TPR domain, ATPase, protein secret protein transport; 2.00A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=98.93 E-value=3.4e-09 Score=95.17 Aligned_cols=100 Identities=12% Similarity=-0.087 Sum_probs=88.6
Q ss_pred HHHHHHhHHHhhCCHHHHHHHHHHHhcCCCC-CCHHHHHHHHHHHHhcCChHHHHHHHHHHHhcC--CC-chHHHHHHHH
Q 014478 321 NSKKHGDTAFRAKDFSTAIDCYTQFIDGGTM-VSPTVYARRCLSYLMNDMPQEALGDAMQAQVVS--PD-WPTALYLQAA 396 (424)
Q Consensus 321 ~~~~~g~~~~~~g~~~~A~~~~~~ai~~~p~-~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~--p~-~~~a~~~~g~ 396 (424)
.....|..+++.|+|++|+..|+++++..+. ....+++++|.++..+|++++|+..|++++.-. |. ..++++++|.
T Consensus 137 ~~~~~a~l~~~~~r~~dA~~~l~~a~~~~d~~~~~~a~~~LG~al~~LG~~~eAl~~l~~a~~g~~~P~~~~da~~~~gl 216 (282)
T 4f3v_A 137 VAWMKAVVYGAAERWTDVIDQVKSAGKWPDKFLAGAAGVAHGVAAANLALFTEAERRLTEANDSPAGEACARAIAWYLAM 216 (282)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHTTGGGCSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTSTTTTTTHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHhhccCCcccHHHHHHHHHHHHHHCCCHHHHHHHHHHHhcCCCCccccHHHHHHHHH
Confidence 5677889999999999999999988876322 114689999999999999999999999999655 66 7789999999
Q ss_pred HHHhCCChHHHHHHHHHHHhchhh
Q 014478 397 CLFSLGMENDARETLKDGTNLEAK 420 (424)
Q Consensus 397 ~~~~~~~~~~A~~~~~~al~l~~~ 420 (424)
++..+|+.++|+..|+++++.+|.
T Consensus 217 aL~~lGr~deA~~~l~~a~a~~P~ 240 (282)
T 4f3v_A 217 ARRSQGNESAAVALLEWLQTTHPE 240 (282)
T ss_dssp HHHHHTCHHHHHHHHHHHHHHSCC
T ss_pred HHHHcCCHHHHHHHHHHHHhcCCc
Confidence 999999999999999999999986
|
| >1zu2_A Mitochondrial import receptor subunit TOM20-3; TPR, tetratricopeptide repeat like, TPR-like, transport protein; NMR {Arabidopsis thaliana} SCOP: a.118.8.1 | Back alignment and structure |
|---|
Probab=98.93 E-value=1.6e-09 Score=88.04 Aligned_cols=72 Identities=15% Similarity=-0.014 Sum_probs=63.5
Q ss_pred HHHHHHHHHhHHHhhCCH----------HHHHHHHHHHhcCCCCCCHHHHHHHHHHHHhcC-----------ChHHHHHH
Q 014478 318 ETLNSKKHGDTAFRAKDF----------STAIDCYTQFIDGGTMVSPTVYARRCLSYLMND-----------MPQEALGD 376 (424)
Q Consensus 318 ~~~~~~~~g~~~~~~g~~----------~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~-----------~~~~A~~~ 376 (424)
.+..+...|..+...+++ ++|+..|++||+++|+ +..+|+++|.+|..+| ++++|+..
T Consensus 35 ~aea~~n~G~~l~~l~~~~~g~~al~~~~eAi~~le~AL~ldP~-~~~A~~~LG~ay~~lg~l~P~~~~a~g~~~eA~~~ 113 (158)
T 1zu2_A 35 DADNLTRWGGVLLELSQFHSISDAKQMIQEAITKFEEALLIDPK-KDEAVWCIGNAYTSFAFLTPDETEAKHNFDLATQF 113 (158)
T ss_dssp CHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhcccchhhhhHhHHHHHHHHHHHHHHhCcC-cHHHHHHHHHHHHHhcccCcchhhhhccHHHHHHH
Confidence 455677788888877765 5999999999999999 9999999999999885 89999999
Q ss_pred HHHHHhcCCCchHH
Q 014478 377 AMQAQVVSPDWPTA 390 (424)
Q Consensus 377 ~~~al~~~p~~~~a 390 (424)
|++|++++|++...
T Consensus 114 ~~kAl~l~P~~~~y 127 (158)
T 1zu2_A 114 FQQAVDEQPDNTHY 127 (158)
T ss_dssp HHHHHHHCTTCHHH
T ss_pred HHHHHHhCCCCHHH
Confidence 99999999998643
|
| >3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A | Back alignment and structure |
|---|
Probab=98.93 E-value=3.1e-10 Score=104.65 Aligned_cols=152 Identities=14% Similarity=0.110 Sum_probs=103.4
Q ss_pred hhhhHHHHHHHHHhcCC-CcC--cceeEEEEEeCC---eeeEEEecCCCCCHHhHhccCCCCCCCHHHHHHHHHHHHHHH
Q 014478 27 LGETLNLEEAKAVGNLR-SER--LANLIGCCYEAD---ERLLVAEFMPNETLAKHLFHWETQPMKWAMRLRVALYLAQAL 100 (424)
Q Consensus 27 ~~~~~~~~E~~~l~~l~-h~~--iv~~~~~~~~~~---~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L 100 (424)
.....+.+|+++|+.+. +.. +++++..+.... ..|+||++++|.+|.+... ..++..+...++.+++..|
T Consensus 52 ~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~~~~~~~~vm~~i~G~~l~~~~~----~~l~~~~~~~~~~~l~~~l 127 (304)
T 3sg8_A 52 RGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETYQMSFAGFTKIKGVPLTPLLL----NNLPKQSQNQAAKDLARFL 127 (304)
T ss_dssp HHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCSSCSCSCEEEECCCCEECCHHHH----HTSCHHHHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCCCCCcceEEEcccCCeECCcccc----ccCCHHHHHHHHHHHHHHH
Confidence 34567889999998883 322 566666654433 3479999999998875432 2467888888899999998
Q ss_pred HHHHhC----------------------------------------------------------CCcccccCCCCCeeec
Q 014478 101 EYCSSK----------------------------------------------------------GRALYHDLNAYRILFD 122 (424)
Q Consensus 101 ~~lH~~----------------------------------------------------------~~ivH~dikp~Nill~ 122 (424)
..||+. . ++|+|++|.||+++
T Consensus 128 a~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~-~~HgD~~~~N~l~~ 206 (304)
T 3sg8_A 128 SELHSINISGFKSNLVLDFREKINEDNKKIKKLLSRELKGPQMKKVDDFYRDILENEIYFKYYPC-LIHNDFSSDHILFD 206 (304)
T ss_dssp HHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTTTSCHHHHHHHHHHHHHHHTCGGGTCCCCE-EECSCCCGGGEEEE
T ss_pred HHHHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcccCCcccHHHHHHHHHHHHhccccccCCce-eEeCCCCcccEEEe
Confidence 888861 2 69999999999998
Q ss_pred C--CCCeEEccccccccCCCCCccccCccC---CCcccccc-----CC---------CCCCcceehhHHHHHHHhhCCCC
Q 014478 123 K--DGNPRLSSFGLMKNSRDGKSYSTNLAF---TPPEYMRT-----GR---------VTPESVVYSFGTMLLDLLSGKHI 183 (424)
Q Consensus 123 ~--~~~~kl~Dfg~~~~~~~~~~~~gt~~y---~aPE~~~~-----~~---------~~~~~Dv~slG~~l~el~~g~~~ 183 (424)
. ++.+.|+||+.+..............+ ..|+.... +. .....+.|++|.++|.+.+|..+
T Consensus 207 ~~~~~~~~~iD~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~l~~Y~~~~~~~~~~r~~~~~~~~~l~~~~~~~~~g~~~ 286 (304)
T 3sg8_A 207 TEKNTICGIIDFGDAAISDPDNDFISLMEDDEEYGMEFVSKILNHYKHKDIPTVLEKYRMKEKYWSFEKIIYGKEYGYMD 286 (304)
T ss_dssp TTTTEEEEECCCTTCEEECTTHHHHTTCCTTTSCCHHHHHHHHHHHTCSCHHHHHHHHHHHHHHHHHHHHHHHHHTTCHH
T ss_pred CCCCCEEEEEeCCCCccCChHHHHHHHHhhccccCHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHHHHHcCCHH
Confidence 7 456789999988765433221111111 23332211 11 11125789999999999999844
|
| >3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1} | Back alignment and structure |
|---|
Probab=98.92 E-value=3.2e-09 Score=90.83 Aligned_cols=103 Identities=11% Similarity=-0.061 Sum_probs=74.4
Q ss_pred HHHHHHHHHhHHHhhCCHHHHHHHHHHHhcC---CCC---CCHHHHHHHHHHHHhcCChHHHHHHHHHHHhcCCCc----
Q 014478 318 ETLNSKKHGDTAFRAKDFSTAIDCYTQFIDG---GTM---VSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDW---- 387 (424)
Q Consensus 318 ~~~~~~~~g~~~~~~g~~~~A~~~~~~ai~~---~p~---~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~---- 387 (424)
.+..+...|..+...|++++|++.|.++++. .++ ....++.++|.++..+|++++|+..+++++++.+..
T Consensus 65 ~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~ 144 (203)
T 3gw4_A 65 EHRALHQVGMVERMAGNWDAARRCFLEERELLASLPEDPLAASANAYEVATVALHFGDLAGARQEYEKSLVYAQQADDQV 144 (203)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhccchH
Confidence 4456667788888888888888888888876 332 134567788888888888888888888887653321
Q ss_pred --hHHHHHHHHHHHhCCChHHHHHHHHHHHhchhh
Q 014478 388 --PTALYLQAACLFSLGMENDARETLKDGTNLEAK 420 (424)
Q Consensus 388 --~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~ 420 (424)
..++.++|.++..+|++++|+..|++++++-.+
T Consensus 145 ~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~ 179 (203)
T 3gw4_A 145 AIACAFRGLGDLAQQEKNLLEAQQHWLRARDIFAE 179 (203)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHCcCHHHHHHHHHHHHHHHHH
Confidence 224577888888888888888888888876543
|
| >3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.92 E-value=4e-09 Score=100.24 Aligned_cols=102 Identities=14% Similarity=0.111 Sum_probs=93.6
Q ss_pred HHHHHHHHhHHHhhCCHHHHHHHHHHHhcCCCCCC----HHHHHHHHHHHHhcCChHHHHHHHHHHHhc------CCCch
Q 014478 319 TLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVS----PTVYARRCLSYLMNDMPQEALGDAMQAQVV------SPDWP 388 (424)
Q Consensus 319 ~~~~~~~g~~~~~~g~~~~A~~~~~~ai~~~p~~~----~~~~~~~~~~~~~~~~~~~A~~~~~~al~~------~p~~~ 388 (424)
+..+...|..++..|++++|+..|+++++..|. + ..++.++|.+|...|++++|+..+++|+.+ .|...
T Consensus 9 ~~~l~~~g~~~~~~g~~~~A~~~~~~al~~~~~-~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~ 87 (406)
T 3sf4_A 9 CLELALEGERLCKSGDCRAGVSFFEAAVQVGTE-DLKTLSAIYSQLGNAYFYLHDYAKALEYHHHDLTLARTIGDQLGEA 87 (406)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCS-CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHHHHHHhccHHHHHHHHHHHHhcCcc-cHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhccccHHHH
Confidence 456778999999999999999999999999998 6 468999999999999999999999999988 56678
Q ss_pred HHHHHHHHHHHhCCChHHHHHHHHHHHhchhhc
Q 014478 389 TALYLQAACLFSLGMENDARETLKDGTNLEAKK 421 (424)
Q Consensus 389 ~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~ 421 (424)
.+++++|.++..+|++++|+..|++++++.++.
T Consensus 88 ~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~ 120 (406)
T 3sf4_A 88 KASGNLGNTLKVLGNFDEAIVCCQRHLDISREL 120 (406)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhc
Confidence 899999999999999999999999999998763
|
| >3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=98.92 E-value=3.4e-09 Score=100.70 Aligned_cols=97 Identities=13% Similarity=0.108 Sum_probs=54.9
Q ss_pred HHHhHHHhhCCHHHHHHHHHHHhcC---CCC--CCHHHHHHHHHHHHhcCChHHHHHHHHHHHhcCCC-------chHHH
Q 014478 324 KHGDTAFRAKDFSTAIDCYTQFIDG---GTM--VSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPD-------WPTAL 391 (424)
Q Consensus 324 ~~g~~~~~~g~~~~A~~~~~~ai~~---~p~--~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~-------~~~a~ 391 (424)
.+|..++..|+|++|++.|.+|+++ .++ ....+++++|.+|..+|++++|+..+++|+++.++ .+.++
T Consensus 108 ~~g~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~ 187 (383)
T 3ulq_A 108 FRGMYELDQREYLSAIKFFKKAESKLIFVKDRIEKAEFFFKMSESYYYMKQTYFSMDYARQAYEIYKEHEAYNIRLLQCH 187 (383)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHTTGGGCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTCSTTHHHHHHHH
T ss_pred HHHHHHHHhcCHHHHHHHHHHHHHHHhhCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCccchHHHHHHH
Confidence 3566666666666666666666654 111 02355666666666666666666666666655322 23355
Q ss_pred HHHHHHHHhCCChHHHHHHHHHHHhchhh
Q 014478 392 YLQAACLFSLGMENDARETLKDGTNLEAK 420 (424)
Q Consensus 392 ~~~g~~~~~~~~~~~A~~~~~~al~l~~~ 420 (424)
+++|.+|..+|++++|+..|++|+++.++
T Consensus 188 ~~lg~~~~~~g~~~~A~~~~~~al~~~~~ 216 (383)
T 3ulq_A 188 SLFATNFLDLKQYEDAISHFQKAYSMAEA 216 (383)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCHHHHHHHHHHHHHHHHH
Confidence 66666666666666666666666655443
|
| >3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A | Back alignment and structure |
|---|
Probab=98.92 E-value=3.5e-09 Score=80.09 Aligned_cols=83 Identities=12% Similarity=0.092 Sum_probs=70.4
Q ss_pred HHHHHHHHHhHHHhhCCHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhcCCCchH--HHHHHH
Q 014478 318 ETLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPT--ALYLQA 395 (424)
Q Consensus 318 ~~~~~~~~g~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~--a~~~~g 395 (424)
....+...|..++..|+|++|++.|+++++++|+ +..+|+++|.+|..+|++++|+..|++++++.|++.. +...+.
T Consensus 6 ~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~-~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~~~~~~~~~~~~l~ 84 (100)
T 3ma5_A 6 DPFTRYALAQEHLKHDNASRALALFEELVETDPD-YVGTYYHLGKLYERLDRTDDAIDTYAQGIEVAREEGTQKDLSELQ 84 (100)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT-CTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-cHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhhhcCCchhHHHHHH
Confidence 3456778999999999999999999999999999 9999999999999999999999999999999876443 334444
Q ss_pred HHHHhC
Q 014478 396 ACLFSL 401 (424)
Q Consensus 396 ~~~~~~ 401 (424)
.++...
T Consensus 85 ~~l~~~ 90 (100)
T 3ma5_A 85 DAKLKA 90 (100)
T ss_dssp HHHHHH
T ss_pred HHHHHc
Confidence 444443
|
| >1pc2_A Mitochondria fission protein; unknown function; NMR {Homo sapiens} SCOP: a.118.8.1 | Back alignment and structure |
|---|
Probab=98.91 E-value=5.5e-09 Score=83.98 Aligned_cols=89 Identities=9% Similarity=0.017 Sum_probs=80.4
Q ss_pred CCHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHhcC---ChHHHHHHHHHHHhcC-C-CchHHHHHHHHHHHhCCChHHH
Q 014478 333 KDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMND---MPQEALGDAMQAQVVS-P-DWPTALYLQAACLFSLGMENDA 407 (424)
Q Consensus 333 g~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~---~~~~A~~~~~~al~~~-p-~~~~a~~~~g~~~~~~~~~~~A 407 (424)
+..+.+.+.|.+.++.++. +..+.++.|.++.+.+ ++++++..++..++.+ | ++.+++|++|.+++++|+|++|
T Consensus 12 ~~l~~~~~~y~~e~~~~~~-~~~~~F~ya~~Lv~S~~~~~~~~gI~lLe~ll~~~~p~~~rd~lY~LAv~~~kl~~Y~~A 90 (152)
T 1pc2_A 12 EDLLKFEKKFQSEKAAGSV-SKSTQFEYAWCLVRSKYNDDIRKGIVLLEELLPKGSKEEQRDYVFYLAVGNYRLKEYEKA 90 (152)
T ss_dssp HHHHHHHHHHHHHHHTTCC-CHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTSCHHHH
T ss_pred HHHHHHHHHHHHHHccCCC-cHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCCccchHHHHHHHHHHHHHccCHHHH
Confidence 3456788889999988887 9999999999999988 6779999999999999 7 6799999999999999999999
Q ss_pred HHHHHHHHhchhhcC
Q 014478 408 RETLKDGTNLEAKKN 422 (424)
Q Consensus 408 ~~~~~~al~l~~~~~ 422 (424)
+.+++++|+++|.+.
T Consensus 91 ~~y~~~lL~ieP~n~ 105 (152)
T 1pc2_A 91 LKYVRGLLQTEPQNN 105 (152)
T ss_dssp HHHHHHHHHHCTTCH
T ss_pred HHHHHHHHhcCCCCH
Confidence 999999999999753
|
| >1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A* | Back alignment and structure |
|---|
Probab=98.91 E-value=6.6e-09 Score=103.86 Aligned_cols=92 Identities=12% Similarity=0.014 Sum_probs=85.3
Q ss_pred HHhhCCH-HHHHHHHHHHhcCCCCCCHHHHHHHHHHHHhcCC----------hHHHHHHHHHHHhcCCCchHHHHHHHHH
Q 014478 329 AFRAKDF-STAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDM----------PQEALGDAMQAQVVSPDWPTALYLQAAC 397 (424)
Q Consensus 329 ~~~~g~~-~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~----------~~~A~~~~~~al~~~p~~~~a~~~~g~~ 397 (424)
..+.|++ ++|++.|+++|..+|+ ++.+|+.|+.++..+++ +++|+++++++++.+|++..+|+.+|.+
T Consensus 38 ~~~~~~~~eeal~~~~~~l~~nP~-~~taW~~R~~~l~~l~~~~~~~~~~~~~~~eL~~~~~~l~~~pK~y~aW~hR~w~ 116 (567)
T 1dce_A 38 KRQAGELDESVLELTSQILGANPD-FATLWNCRREVLQHLETEKSPEESAALVKAELGFLESCLRVNPKSYGTWHHRCWL 116 (567)
T ss_dssp HHHTTCCSHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred HHHcCCCCHHHHHHHHHHHHHCch-hHHHHHHHHHHHHhcccccchhhhhhhHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Confidence 3445544 6789999999999999 99999999999999998 9999999999999999999999999999
Q ss_pred HHhCC--ChHHHHHHHHHHHhchhhc
Q 014478 398 LFSLG--MENDARETLKDGTNLEAKK 421 (424)
Q Consensus 398 ~~~~~--~~~~A~~~~~~al~l~~~~ 421 (424)
+..++ ++++|++++.+++++||++
T Consensus 117 l~~l~~~~~~~el~~~~k~l~~d~~N 142 (567)
T 1dce_A 117 LSRLPEPNWARELELCARFLEADERN 142 (567)
T ss_dssp HHTCSSCCHHHHHHHHHHHHHHCTTC
T ss_pred HHHcccccHHHHHHHHHHHHhhcccc
Confidence 99999 6799999999999999975
|
| >3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus} | Back alignment and structure |
|---|
Probab=98.90 E-value=5.5e-09 Score=85.25 Aligned_cols=104 Identities=11% Similarity=0.022 Sum_probs=91.3
Q ss_pred HHHHHHHHHHhHHHhhCCHHHHHHHHHHHhcCCCCC-----CHHHHHHHHHHHHhcCChHHHHHHHHHHHhcCCCc----
Q 014478 317 QETLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMV-----SPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDW---- 387 (424)
Q Consensus 317 ~~~~~~~~~g~~~~~~g~~~~A~~~~~~ai~~~p~~-----~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~---- 387 (424)
..+..+...|..++..|++++|++.|.++++..+.. ...++.++|.+|..+|++++|+..+++++++.++.
T Consensus 7 ~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~ 86 (164)
T 3ro3_A 7 AQGRAFGNLGNTHYLLGNFRDAVIAHEQRLLIAKEFGDKAAERIAYSNLGNAYIFLGEFETASEYYKKTLLLARQLKDRA 86 (164)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHH
T ss_pred HHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCCcH
Confidence 456778889999999999999999999999875531 13689999999999999999999999999886653
Q ss_pred --hHHHHHHHHHHHhCCChHHHHHHHHHHHhchhh
Q 014478 388 --PTALYLQAACLFSLGMENDARETLKDGTNLEAK 420 (424)
Q Consensus 388 --~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~ 420 (424)
..+++++|.++..+|++++|+..+++++++.+.
T Consensus 87 ~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~ 121 (164)
T 3ro3_A 87 VEAQSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQE 121 (164)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHH
Confidence 678999999999999999999999999988643
|
| >3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus} | Back alignment and structure |
|---|
Probab=98.89 E-value=5.3e-09 Score=102.29 Aligned_cols=107 Identities=7% Similarity=-0.054 Sum_probs=89.4
Q ss_pred hHhHHHHHHHHHHHhHHHhhCCHHHHHHHHHHHhcC-----CCC--CCHHHHHHHHHHHHhcCChHHHHHHHHHHHhc--
Q 014478 313 TSQMQETLNSKKHGDTAFRAKDFSTAIDCYTQFIDG-----GTM--VSPTVYARRCLSYLMNDMPQEALGDAMQAQVV-- 383 (424)
Q Consensus 313 ~~~~~~~~~~~~~g~~~~~~g~~~~A~~~~~~ai~~-----~p~--~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~-- 383 (424)
......+....+++..+..+|+|++|+..|+++++. .|+ +-...++|+|.+|..+|+|++|+..++++|++
T Consensus 303 ~~~l~~a~~~le~a~~~~~qg~~~eA~~l~~~aL~~~~~~lg~~Hp~~a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~ 382 (490)
T 3n71_A 303 KEMIQFSKDTLEKIDKARSEGLYHEVVKLCRECLEKQEPVFADTNLYVLRLLSIASEVLSYLQAYEEASHYARRMVDGYM 382 (490)
T ss_dssp HHHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHH
Confidence 334445566778888889999999999999999965 233 14578999999999999999999999999966
Q ss_pred ---CC---CchHHHHHHHHHHHhCCChHHHHHHHHHHHhchh
Q 014478 384 ---SP---DWPTALYLQAACLFSLGMENDARETLKDGTNLEA 419 (424)
Q Consensus 384 ---~p---~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~ 419 (424)
.| +-+..++++|.+|..+|+|++|+..|++|+++-.
T Consensus 383 ~~lG~~Hp~~a~~l~nLa~~~~~~G~~~eA~~~~~~Al~i~~ 424 (490)
T 3n71_A 383 KLYHHNNAQLGMAVMRAGLTNWHAGHIEVGHGMICKAYAILL 424 (490)
T ss_dssp HHSCTTCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHcCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
Confidence 34 4456899999999999999999999999998754
|
| >3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=98.89 E-value=5.4e-09 Score=99.24 Aligned_cols=104 Identities=13% Similarity=0.035 Sum_probs=93.0
Q ss_pred HHHHHHHHHHhHHHhhCCHHHHHHHHHHHhcCCCC-----CCHHHHHHHHHHHHhcCChHHHHHHHHHHHh-----cCCC
Q 014478 317 QETLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTM-----VSPTVYARRCLSYLMNDMPQEALGDAMQAQV-----VSPD 386 (424)
Q Consensus 317 ~~~~~~~~~g~~~~~~g~~~~A~~~~~~ai~~~p~-----~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~-----~~p~ 386 (424)
..+..+...|..+...|+|++|++.|.+|+++.+. ....++.++|.+|..+|++++|+..+++|++ .+|.
T Consensus 180 ~~~~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~~~~ 259 (378)
T 3q15_A 180 RTIQSLFVIAGNYDDFKHYDKALPHLEAALELAMDIQNDRFIAISLLNIANSYDRSGDDQMAVEHFQKAAKVSREKVPDL 259 (378)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHCGGG
T ss_pred hHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhhCChh
Confidence 34567778999999999999999999999986431 1346899999999999999999999999999 8899
Q ss_pred chHHHHHHHHHHHhCCChHHHHHHHHHHHhchhh
Q 014478 387 WPTALYLQAACLFSLGMENDARETLKDGTNLEAK 420 (424)
Q Consensus 387 ~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~ 420 (424)
.+.+++++|.++..+|++++|+..|++|+++.++
T Consensus 260 ~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~ 293 (378)
T 3q15_A 260 LPKVLFGLSWTLCKAGQTQKAFQFIEEGLDHITA 293 (378)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCT
T ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999998654
|
| >3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.88 E-value=9.2e-09 Score=93.92 Aligned_cols=101 Identities=10% Similarity=-0.033 Sum_probs=91.1
Q ss_pred HHHHHHHHHHHhHHHhhCCHHHHHHHHHHHhcC--------CCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhcC---
Q 014478 316 MQETLNSKKHGDTAFRAKDFSTAIDCYTQFIDG--------GTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVS--- 384 (424)
Q Consensus 316 ~~~~~~~~~~g~~~~~~g~~~~A~~~~~~ai~~--------~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~--- 384 (424)
...+..+...|..++..|++++|++.|.++++. .|. ...++.++|.+|..+|++++|+..+++++++.
T Consensus 66 ~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~-~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~ 144 (311)
T 3nf1_A 66 PDVATMLNILALVYRDQNKYKDAANLLNDALAIREKTLGKDHPA-VAATLNNLAVLYGKRGKYKEAEPLCKRALEIREKV 144 (311)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHCTTCHH-HHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHhCCCChH-HHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHh
Confidence 344567778999999999999999999999987 344 67889999999999999999999999999884
Q ss_pred -----CCchHHHHHHHHHHHhCCChHHHHHHHHHHHhc
Q 014478 385 -----PDWPTALYLQAACLFSLGMENDARETLKDGTNL 417 (424)
Q Consensus 385 -----p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l 417 (424)
|....+++++|.++..+|++++|+..|++++++
T Consensus 145 ~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~ 182 (311)
T 3nf1_A 145 LGKDHPDVAKQLNNLALLCQNQGKYEEVEYYYQRALEI 182 (311)
T ss_dssp HCTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHH
T ss_pred cCCCChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 778889999999999999999999999999998
|
| >4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.88 E-value=4.8e-09 Score=102.29 Aligned_cols=101 Identities=10% Similarity=-0.014 Sum_probs=86.2
Q ss_pred HHHHHHHHhHHHhhCCHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHhc-------------------CChHHHHHHHHH
Q 014478 319 TLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMN-------------------DMPQEALGDAMQ 379 (424)
Q Consensus 319 ~~~~~~~g~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~-------------------~~~~~A~~~~~~ 379 (424)
...+...|..+...|++++|++.|.+|++.+|+ +..++.++|.+|... +.+++|+..+++
T Consensus 247 ~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~-~~~~~~~lg~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~ 325 (472)
T 4g1t_A 247 TDVLRSAAKFYRRKDEPDKAIELLKKALEYIPN-NAYLHCQIGCCYRAKVFQVMNLRENGMYGKRKLLELIGHAVAHLKK 325 (472)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT-CHHHHHHHHHHHHHHHHHHHHC------CHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCchHHHHHHHHHHHHhCCC-hHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhhHHHHHHHHHH
Confidence 445667899999999999999999999999999 999999999887543 346778888888
Q ss_pred HHhcCCCchHHHHHHHHHHHhCCChHHHHHHHHHHHhchhh
Q 014478 380 AQVVSPDWPTALYLQAACLFSLGMENDARETLKDGTNLEAK 420 (424)
Q Consensus 380 al~~~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~ 420 (424)
+++++|++..+++++|.++..+|++++|+..|+++++++++
T Consensus 326 a~~~~~~~~~~~~~lg~~~~~~~~~~~A~~~~~kaL~~~~~ 366 (472)
T 4g1t_A 326 ADEANDNLFRVCSILASLHALADQYEEAEYYFQKEFSKELT 366 (472)
T ss_dssp HHHHCTTTCCCHHHHHHHHHHTTCHHHHHHHHHHHHHSCCC
T ss_pred HhhcCCchhhhhhhHHHHHHHhccHHHHHHHHHHHHhcCCC
Confidence 88889988888888899999999999999999988887764
|
| >1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A | Back alignment and structure |
|---|
Probab=98.87 E-value=1.6e-08 Score=78.63 Aligned_cols=83 Identities=14% Similarity=0.143 Sum_probs=77.2
Q ss_pred HHHHHHHHhHHHhhCCHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhcCCCchHHHHHHHHHH
Q 014478 319 TLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAACL 398 (424)
Q Consensus 319 ~~~~~~~g~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~ 398 (424)
...+...|..++..|++++|+..|.++++.+|. +...+.++|.+|...|++++|+..++++++++|++..++..+|.++
T Consensus 43 ~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~ 121 (125)
T 1na0_A 43 AEAWYNLGNAYYKQGDYDEAIEYYQKALELDPN-NAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAKQNLGNAK 121 (125)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCc-cHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCcHHHHHHHHHHH
Confidence 345667899999999999999999999999999 9999999999999999999999999999999999999999999998
Q ss_pred HhCC
Q 014478 399 FSLG 402 (424)
Q Consensus 399 ~~~~ 402 (424)
..+|
T Consensus 122 ~~~g 125 (125)
T 1na0_A 122 QKQG 125 (125)
T ss_dssp HHHC
T ss_pred Hhcc
Confidence 7654
|
| >2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2 | Back alignment and structure |
|---|
Probab=98.85 E-value=2.8e-09 Score=96.99 Aligned_cols=101 Identities=7% Similarity=-0.072 Sum_probs=86.0
Q ss_pred HHHHHHHHHhHHHhhCCHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhcCCCchH-----H--
Q 014478 318 ETLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPT-----A-- 390 (424)
Q Consensus 318 ~~~~~~~~g~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~-----a-- 390 (424)
....+...|..+++.|++++|++.|+++++++|+ +..+++++|.+|..+|++++|+..|+++++++|++.. .
T Consensus 37 ~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~-~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~~~~~ 115 (281)
T 2c2l_A 37 VAVYYTNRALCYLKMQQPEQALADCRRALELDGQ-SVKAHFFLGQCQLEMESYDEAIANLQRAYSLAKEQRLNFGDDIPS 115 (281)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHTTSCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCCCSHHHH
T ss_pred cHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCccchhhHHHHHHH
Confidence 3556778999999999999999999999999999 9999999999999999999999999999999987631 1
Q ss_pred ------------------------HHHHHHHHHhCCChHHHHHHHHHHHhchhhc
Q 014478 391 ------------------------LYLQAACLFSLGMENDARETLKDGTNLEAKK 421 (424)
Q Consensus 391 ------------------------~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~ 421 (424)
...+|.. ..|++++|++.|++|++++|.+
T Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~l--~~~~~~~A~~~~~~al~~~p~~ 168 (281)
T 2c2l_A 116 ALRIAKKKRWNSIEERRIHQESELHSYLTRL--IAAERERELEECQRNHEGHEDD 168 (281)
T ss_dssp HHHHHHHHHHHHHHHTCCCCCCHHHHHHHHH--HHHHHHHHHTTTSGGGTTTSCH
T ss_pred HHHHHHHHHHHHHHHHHHhhhHHHHHHHHHH--HHHHHHHHHHHHHhhhccccch
Confidence 1112222 3689999999999999999863
|
| >3dss_A Geranylgeranyl transferase type-2 subunit alpha; protein prenylation, metal-binding, prenyltransferase, zinc, phosphoprotein; 1.80A {Rattus norvegicus} PDB: 3dst_A* 3dsu_A* 3dsv_A* 3dsw_A* 3dsx_A* 3hxb_A* 3hxc_A* 3hxd_A* 3hxe_A* 3hxf_A* 3pz1_A* 3pz2_A* 3pz3_A* 3c72_A* 4gtv_A* 4gts_A* 4ehm_A* 4gtt_A* | Back alignment and structure |
|---|
Probab=98.85 E-value=2.6e-08 Score=91.86 Aligned_cols=101 Identities=4% Similarity=-0.126 Sum_probs=74.7
Q ss_pred HHHHHHHhHHHhhCC----------HHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHhcCC--hHHHHHHHHHHHhcCCCc
Q 014478 320 LNSKKHGDTAFRAKD----------FSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDM--PQEALGDAMQAQVVSPDW 387 (424)
Q Consensus 320 ~~~~~~g~~~~~~g~----------~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~--~~~A~~~~~~al~~~p~~ 387 (424)
..+..++......++ +++++++++.++..+|. ++.+|+.++.++..+++ +++++..++++++++|.|
T Consensus 65 taWn~Rr~iL~~l~~~~~~~~~~~~l~~EL~~~~~~L~~~PK-ny~aW~hR~wlL~~l~~~~~~~EL~~~~k~l~~dprN 143 (331)
T 3dss_A 65 TLWNCRREVLQHLETEKSPEESAALVKAELGFLESCLRVNPK-SYGTWHHRCWLLSRLPEPNWARELELCARFLEADERN 143 (331)
T ss_dssp HHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHCSSCCHHHHHHHHHHHHHHCTTC
T ss_pred HHHHHHHHHHHHhcccccchhhhHHHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHhccCcccHHHHHHHHHHHHHhCCCC
Confidence 344555555554443 67777888888888887 77788888877777773 778888888888888888
Q ss_pred hHHHHHHHHHHHhCCC-hHHHHHHHHHHHhchhhc
Q 014478 388 PTALYLQAACLFSLGM-ENDARETLKDGTNLEAKK 421 (424)
Q Consensus 388 ~~a~~~~g~~~~~~~~-~~~A~~~~~~al~l~~~~ 421 (424)
..||++++.++..+|. ++++++++.++++.+|.+
T Consensus 144 y~AW~~R~~vl~~l~~~~~eel~~~~~~I~~~p~N 178 (331)
T 3dss_A 144 FHCWDYRRFVAAQAAVAPAEELAFTDSLITRNFSN 178 (331)
T ss_dssp HHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCSCC
T ss_pred HHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHCCCC
Confidence 8888888888777777 477888888888777765
|
| >3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A* | Back alignment and structure |
|---|
Probab=98.85 E-value=9.7e-09 Score=98.78 Aligned_cols=102 Identities=11% Similarity=-0.068 Sum_probs=83.8
Q ss_pred HHHHHHHHhHHHhhCCHHHHHHHHHHHhcC-----CCC--CCHHHHHHHHHHHHhcCChHHHHHHHHHHHhc--------
Q 014478 319 TLNSKKHGDTAFRAKDFSTAIDCYTQFIDG-----GTM--VSPTVYARRCLSYLMNDMPQEALGDAMQAQVV-------- 383 (424)
Q Consensus 319 ~~~~~~~g~~~~~~g~~~~A~~~~~~ai~~-----~p~--~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~-------- 383 (424)
+....+.+......|+|++|+..|+++++. .|+ +-...++|+|.+|..+|+|++|+..+++++++
T Consensus 298 ~~~~le~~~~~~~~g~~~eA~~~~~~~L~i~~~~lg~~Hp~~a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~~lG~~ 377 (433)
T 3qww_A 298 ARNVIEEFRRAKHYKSPSELLEICELSQEKMSSVFEDSNVYMLHMMYQAMGVCLYMQDWEGALKYGQKIIKPYSKHYPVY 377 (433)
T ss_dssp HHHHHHHHHHHTTTSCHHHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCSS
T ss_pred HHHHHHHHHHhhhccCHHHHHHHHHHHHHHhhCccChhchHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHcCCC
Confidence 334455566666779999999999999974 343 13477999999999999999999999999965
Q ss_pred CCCchHHHHHHHHHHHhCCChHHHHHHHHHHHhchhh
Q 014478 384 SPDWPTALYLQAACLFSLGMENDARETLKDGTNLEAK 420 (424)
Q Consensus 384 ~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~ 420 (424)
.|+-+..++++|.+|..+|+|++|+..|++|+++-.+
T Consensus 378 Hp~~a~~l~nLa~~~~~qg~~~eA~~~~~~Al~i~~~ 414 (433)
T 3qww_A 378 SLNVASMWLKLGRLYMGLENKAAGEKALKKAIAIMEV 414 (433)
T ss_dssp CHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred ChHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHH
Confidence 3445568999999999999999999999999987643
|
| >1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1 | Back alignment and structure |
|---|
Probab=98.84 E-value=2.5e-08 Score=76.68 Aligned_cols=80 Identities=10% Similarity=-0.049 Sum_probs=75.0
Q ss_pred HHHHHHHHhHHHhhCCHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhcCCCchHHHHHHHHHH
Q 014478 319 TLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAACL 398 (424)
Q Consensus 319 ~~~~~~~g~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~ 398 (424)
...+...|..++..|++++|++.|.++++.+|+ +..++.++|.++..+|++++|+..++++++++|++..++..++.+.
T Consensus 38 ~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~ 116 (118)
T 1elw_A 38 HVLYSNRSAAYAKKGDYQKAYEDGCKTVDLKPD-WGKGYSRKAAALEFLNRFEEAKRTYEEGLKHEANNPQLKEGLQNME 116 (118)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhccHHHHHHHHHHHHHhCcc-cHHHHHHHHHHHHHHhhHHHHHHHHHHHHHcCCCCHHHHHHHHHhh
Confidence 446678899999999999999999999999999 9999999999999999999999999999999999999999998875
Q ss_pred H
Q 014478 399 F 399 (424)
Q Consensus 399 ~ 399 (424)
.
T Consensus 117 ~ 117 (118)
T 1elw_A 117 A 117 (118)
T ss_dssp H
T ss_pred c
Confidence 3
|
| >3q7a_A Farnesyltransferase alpha subunit; protein prenyltransferase, transferase-transferase inhibitor; HET: SUC 3FX FPP 778; 2.00A {Cryptococcus neoformans} PDB: 3q73_A* 3q78_A* 3q79_A* 3q75_A* 3q7f_A* 3sfx_A* 3sfy_A* | Back alignment and structure |
|---|
Probab=98.82 E-value=2.4e-08 Score=92.58 Aligned_cols=89 Identities=10% Similarity=-0.054 Sum_probs=84.3
Q ss_pred hCCHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHhcC-ChHHHHHHHHHHHhcCCCchHHHHHHHHHHHhC-C-ChHHHH
Q 014478 332 AKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMND-MPQEALGDAMQAQVVSPDWPTALYLQAACLFSL-G-MENDAR 408 (424)
Q Consensus 332 ~g~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~-~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~~-~-~~~~A~ 408 (424)
.+..++|++.++++|.++|+ +..+|+.|+.++..++ .+++++..++++|..+|++..+|+.++.++..+ + ++++++
T Consensus 67 ~e~se~AL~lt~~~L~~nP~-~ytaWn~R~~iL~~l~~~l~eEL~~~~~~L~~nPKny~aW~hR~wlL~~l~~~~~~~EL 145 (349)
T 3q7a_A 67 EEKSERALELTEIIVRMNPA-HYTVWQYRFSLLTSLNKSLEDELRLMNEFAVQNLKSYQVWHHRLLLLDRISPQDPVSEI 145 (349)
T ss_dssp TCCSHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHCCSCCHHHH
T ss_pred CCCCHHHHHHHHHHHHhCch-hHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHhcCCChHHHH
Confidence 34567899999999999999 9999999999999999 599999999999999999999999999999988 8 999999
Q ss_pred HHHHHHHhchhhc
Q 014478 409 ETLKDGTNLEAKK 421 (424)
Q Consensus 409 ~~~~~al~l~~~~ 421 (424)
+.+.+++++||++
T Consensus 146 ~~~~k~L~~dpkN 158 (349)
T 3q7a_A 146 EYIHGSLLPDPKN 158 (349)
T ss_dssp HHHHHHTSSCTTC
T ss_pred HHHHHHHHhCCCC
Confidence 9999999999985
|
| >3dss_A Geranylgeranyl transferase type-2 subunit alpha; protein prenylation, metal-binding, prenyltransferase, zinc, phosphoprotein; 1.80A {Rattus norvegicus} PDB: 3dst_A* 3dsu_A* 3dsv_A* 3dsw_A* 3dsx_A* 3hxb_A* 3hxc_A* 3hxd_A* 3hxe_A* 3hxf_A* 3pz1_A* 3pz2_A* 3pz3_A* 3c72_A* 4gtv_A* 4gts_A* 4ehm_A* 4gtt_A* | Back alignment and structure |
|---|
Probab=98.81 E-value=4e-08 Score=90.61 Aligned_cols=104 Identities=11% Similarity=-0.017 Sum_probs=90.8
Q ss_pred HHHHHHHHHHhHHHhhCCHH-HHHHHHHHHhcCCCCCCHHHHHHHHHHHHhcCC----------hHHHHHHHHHHHhcCC
Q 014478 317 QETLNSKKHGDTAFRAKDFS-TAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDM----------PQEALGDAMQAQVVSP 385 (424)
Q Consensus 317 ~~~~~~~~~g~~~~~~g~~~-~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~----------~~~A~~~~~~al~~~p 385 (424)
+.-..+...-....+.|.+. +|++.++++|..+|+ +..+|+.++.++..+++ +++++..+++++..+|
T Consensus 27 ~~y~~~~~~~~~~~~~~e~s~eaL~~t~~~L~~nP~-~ytaWn~Rr~iL~~l~~~~~~~~~~~~l~~EL~~~~~~L~~~P 105 (331)
T 3dss_A 27 KLYQSATQAVFQKRQAGELDESVLELTSQILGANPD-FATLWNCRREVLQHLETEKSPEESAALVKAELGFLESCLRVNP 105 (331)
T ss_dssp HHHHHHHHHHHHHHHTTCCSHHHHHHHHHHHTTCTT-CHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHCT
T ss_pred HHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHCch-hHHHHHHHHHHHHHhcccccchhhhHHHHHHHHHHHHHHHhCC
Confidence 33334444455555677776 799999999999999 99999999999988876 7899999999999999
Q ss_pred CchHHHHHHHHHHHhCCC--hHHHHHHHHHHHhchhhc
Q 014478 386 DWPTALYLQAACLFSLGM--ENDARETLKDGTNLEAKK 421 (424)
Q Consensus 386 ~~~~a~~~~g~~~~~~~~--~~~A~~~~~~al~l~~~~ 421 (424)
++..+|+.++.++..+++ ++++++++.+++++||++
T Consensus 106 Kny~aW~hR~wlL~~l~~~~~~~EL~~~~k~l~~dprN 143 (331)
T 3dss_A 106 KSYGTWHHRCWLLSRLPEPNWARELELCARFLEADERN 143 (331)
T ss_dssp TCHHHHHHHHHHHHHCSSCCHHHHHHHHHHHHHHCTTC
T ss_pred CCHHHHHHHHHHHhccCcccHHHHHHHHHHHHHhCCCC
Confidence 999999999999999994 999999999999999975
|
| >2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.81 E-value=7.2e-08 Score=77.57 Aligned_cols=82 Identities=10% Similarity=-0.005 Sum_probs=76.4
Q ss_pred HHHHHHHHhHHHhhCCHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhcCCCchHHHHHHHHHH
Q 014478 319 TLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAACL 398 (424)
Q Consensus 319 ~~~~~~~g~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~ 398 (424)
...+...|..++..|++++|++.|+++++.+|+ +..+++++|.+|..+|++++|+..++++++++|++..++..++.+.
T Consensus 65 ~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~ 143 (148)
T 2dba_A 65 AVLHRNRAACHLKLEDYDKAETEASKAIEKDGG-DVKALYRRSQALEKLGRLDQAVLDLQRCVSLEPKNKVFQEALRNIS 143 (148)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTSC-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCSSCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHccHHHHHHHHHHHHhhCcc-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCcHHHHHHHHHHH
Confidence 567778999999999999999999999999999 9999999999999999999999999999999999999999888876
Q ss_pred HhC
Q 014478 399 FSL 401 (424)
Q Consensus 399 ~~~ 401 (424)
...
T Consensus 144 ~~~ 146 (148)
T 2dba_A 144 GPS 146 (148)
T ss_dssp CSC
T ss_pred hhc
Confidence 543
|
| >1ouv_A Conserved hypothetical secreted protein; TPR repeat, HCP repeat, cysteine rich protein, loop-helix-TU repeat protein, hydrolase; 2.00A {Helicobacter pylori} SCOP: a.118.18.1 | Back alignment and structure |
|---|
Probab=98.80 E-value=3.4e-08 Score=88.98 Aligned_cols=98 Identities=20% Similarity=0.122 Sum_probs=85.7
Q ss_pred HHHHHHHHhHHHh----hCCHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHh----cCChHHHHHHHHHHHhcCCCchHH
Q 014478 319 TLNSKKHGDTAFR----AKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLM----NDMPQEALGDAMQAQVVSPDWPTA 390 (424)
Q Consensus 319 ~~~~~~~g~~~~~----~g~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~----~~~~~~A~~~~~~al~~~p~~~~a 390 (424)
...+...|..+.. .+++++|++.|+++++. + +..+++++|.+|.. .+++++|+..++++++.+| +.+
T Consensus 146 ~~a~~~lg~~~~~~~~~~~~~~~A~~~~~~a~~~--~-~~~a~~~lg~~~~~g~~~~~~~~~A~~~~~~a~~~~~--~~a 220 (273)
T 1ouv_A 146 GDGCTILGSLYDAGRGTPKDLKKALASYDKACDL--K-DSPGCFNAGNMYHHGEGATKNFKEALARYSKACELEN--GGG 220 (273)
T ss_dssp HHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHT--T-CHHHHHHHHHHHHHTCSSCCCHHHHHHHHHHHHHTTC--HHH
T ss_pred HHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHC--C-CHHHHHHHHHHHHcCCCCCccHHHHHHHHHHHHhCCC--HHH
Confidence 3455667888887 89999999999999987 3 67889999999999 9999999999999999876 889
Q ss_pred HHHHHHHHHh----CCChHHHHHHHHHHHhchhhc
Q 014478 391 LYLQAACLFS----LGMENDARETLKDGTNLEAKK 421 (424)
Q Consensus 391 ~~~~g~~~~~----~~~~~~A~~~~~~al~l~~~~ 421 (424)
++++|.+|.. .+++++|+..|++|++++|..
T Consensus 221 ~~~l~~~~~~g~~~~~~~~~A~~~~~~a~~~~~~~ 255 (273)
T 1ouv_A 221 CFNLGAMQYNGEGVTRNEKQAIENFKKGCKLGAKG 255 (273)
T ss_dssp HHHHHHHHHTTSSSSCCSTTHHHHHHHHHHHTCHH
T ss_pred HHHHHHHHHcCCCcccCHHHHHHHHHHHHHcCCHH
Confidence 9999999999 999999999999999998864
|
| >3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.79 E-value=1e-08 Score=97.36 Aligned_cols=101 Identities=11% Similarity=0.007 Sum_probs=69.3
Q ss_pred HHHHHHHHhHHHhhCCHHHHHHHHHHHhcCCCCCCH------HHHHHHHHHHHhcCChHHHHHHHHHHHhcCCCc-----
Q 014478 319 TLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSP------TVYARRCLSYLMNDMPQEALGDAMQAQVVSPDW----- 387 (424)
Q Consensus 319 ~~~~~~~g~~~~~~g~~~~A~~~~~~ai~~~p~~~~------~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~----- 387 (424)
+..+...|..++..|++++|++.|.++++..+. .. .++.++|.+|..+|++++|+..+++++++.|+.
T Consensus 187 ~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~-~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~ 265 (406)
T 3sf4_A 187 GRAFGNLGNTHYLLGNFRDAVIAHEQRLLIAKE-FGDKAAERRAYSNLGNAYIFLGEFETASEYYKKTLLLARQLKDRAV 265 (406)
T ss_dssp HHHHHHHHHHHHHHTBHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHh-cCCcHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHhCcCchH
Confidence 345556677777777777777777777766543 22 367777777777777777777777777666655
Q ss_pred -hHHHHHHHHHHHhCCChHHHHHHHHHHHhchhh
Q 014478 388 -PTALYLQAACLFSLGMENDARETLKDGTNLEAK 420 (424)
Q Consensus 388 -~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~ 420 (424)
..+++++|.++..+|++++|+..|++++++.++
T Consensus 266 ~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~ 299 (406)
T 3sf4_A 266 EAQSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQE 299 (406)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHh
Confidence 667777777777777777777777777766544
|
| >2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A | Back alignment and structure |
|---|
Probab=98.79 E-value=4.7e-08 Score=74.39 Aligned_cols=78 Identities=12% Similarity=-0.029 Sum_probs=70.6
Q ss_pred HHHHHHHHhHHHhhCCHHHHHHHHHHHhcCC-------CCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhcCCCchHHH
Q 014478 319 TLNSKKHGDTAFRAKDFSTAIDCYTQFIDGG-------TMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTAL 391 (424)
Q Consensus 319 ~~~~~~~g~~~~~~g~~~~A~~~~~~ai~~~-------p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~ 391 (424)
+......|..++..|+|..|+..|++|++.. +. ...++.++|.||.++|++++|+..+++|++++|++..+.
T Consensus 5 a~dc~~lG~~~~~~~~y~~A~~W~~~Al~~~~~~~~~~~~-~~~i~~~L~~~~~~~g~~~~A~~~~~~al~l~P~~~~~~ 83 (104)
T 2v5f_A 5 AEDCFELGKVAYTEADYYHTELWMEQALRQLDEGEISTID-KVSVLDYLSYAVYQQGDLDKALLLTKKLLELDPEHQRAN 83 (104)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCCCSSC-HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHH
T ss_pred HHHHHHHHHHHHHccchHHHHHHHHHHHHhhhccCCCccc-HHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCCCCHHHH
Confidence 5678899999999999999999999999863 23 578999999999999999999999999999999999999
Q ss_pred HHHHHH
Q 014478 392 YLQAAC 397 (424)
Q Consensus 392 ~~~g~~ 397 (424)
.+++..
T Consensus 84 ~n~~~~ 89 (104)
T 2v5f_A 84 GNLKYF 89 (104)
T ss_dssp HHHHHH
T ss_pred hhHHHH
Confidence 988743
|
| >4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster} | Back alignment and structure |
|---|
Probab=98.78 E-value=1.1e-08 Score=97.77 Aligned_cols=101 Identities=13% Similarity=0.030 Sum_probs=76.9
Q ss_pred HHHHHHHHhHHHhhCCHHHHHHHHHHHhcCCCCCCH------HHHHHHHHHHHhcCChHHHHHHHHHHHhcCCCc-----
Q 014478 319 TLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSP------TVYARRCLSYLMNDMPQEALGDAMQAQVVSPDW----- 387 (424)
Q Consensus 319 ~~~~~~~g~~~~~~g~~~~A~~~~~~ai~~~p~~~~------~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~----- 387 (424)
+..+...|..++..|++++|++.|.+++++.+. .. .++.++|.+|..+|++++|+..+++++.+.|+.
T Consensus 223 ~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~-~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~ 301 (411)
T 4a1s_A 223 GRACGNLGNTYYLLGDFQAAIEHHQERLRIARE-FGDRAAERRANSNLGNSHIFLGQFEDAAEHYKRTLALAVELGEREV 301 (411)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH-HTCHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred HHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHh-cCCcHHHHHHHHHHHHHHHHCcCHHHHHHHHHHHHHHHHHcCCHHH
Confidence 445667788888888888888888888877664 22 377788888888888888888888888777654
Q ss_pred -hHHHHHHHHHHHhCCChHHHHHHHHHHHhchhh
Q 014478 388 -PTALYLQAACLFSLGMENDARETLKDGTNLEAK 420 (424)
Q Consensus 388 -~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~ 420 (424)
..+++.+|.++..+|++++|+..|++++++.++
T Consensus 302 ~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~ 335 (411)
T 4a1s_A 302 EAQSCYSLGNTYTLLHEFNTAIEYHNRHLAIAQE 335 (411)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHH
Confidence 667788888888888888888888888877654
|
| >3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=98.77 E-value=3.8e-08 Score=93.35 Aligned_cols=100 Identities=14% Similarity=0.100 Sum_probs=71.7
Q ss_pred HHHHHHHhHHHhhCCHHHHHHHHHHHhcCCCC-----CCHHHHHHHHHHHHhcCChHHHHHHHHHHHhcCCC-------c
Q 014478 320 LNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTM-----VSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPD-------W 387 (424)
Q Consensus 320 ~~~~~~g~~~~~~g~~~~A~~~~~~ai~~~p~-----~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~-------~ 387 (424)
..+..+|..++..|+|++|+..|.+|+++.+. ....+++++|.+|..+|++++|+..+++|+++.+. .
T Consensus 102 ~~~~~~g~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~~~~~~~ 181 (378)
T 3q15_A 102 YSLFFRGMYEFDQKEYVEAIGYYREAEKELPFVSDDIEKAEFHFKVAEAYYHMKQTHVSMYHILQALDIYQNHPLYSIRT 181 (378)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHTTGGGCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTSTTCHHHH
T ss_pred HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHhCCCchhhH
Confidence 35556777777888888888888888766321 13467777888888888888888888888766432 2
Q ss_pred hHHHHHHHHHHHhCCChHHHHHHHHHHHhchh
Q 014478 388 PTALYLQAACLFSLGMENDARETLKDGTNLEA 419 (424)
Q Consensus 388 ~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~ 419 (424)
+.+++++|.++..+|++++|++.|++|+++.+
T Consensus 182 ~~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~ 213 (378)
T 3q15_A 182 IQSLFVIAGNYDDFKHYDKALPHLEAALELAM 213 (378)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHH
Confidence 45677778888888888888888888777654
|
| >2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris} | Back alignment and structure |
|---|
Probab=98.77 E-value=6.7e-08 Score=76.01 Aligned_cols=83 Identities=13% Similarity=-0.021 Sum_probs=73.7
Q ss_pred HHHHHHHhHHHhhCCHHHHHHHHHHHhcCCCCCC---HHHHHHHHHHHHhcCChHHHHHHHHHHHhcCCCchHHHHHHHH
Q 014478 320 LNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVS---PTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAA 396 (424)
Q Consensus 320 ~~~~~~g~~~~~~g~~~~A~~~~~~ai~~~p~~~---~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~ 396 (424)
..+...|..++..|+|++|+..|+++++.+|+ + ..+++++|.+|..+|++++|+..++++++.+|++..+...+..
T Consensus 40 ~~~~~lg~~~~~~~~~~~A~~~~~~~~~~~p~-~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~p~~~~~~~a~~~ 118 (129)
T 2xev_A 40 NALYWLGESYYATRNFQLAEAQFRDLVSRYPT-HDKAAGGLLKLGLSQYGEGKNTEAQQTLQQVATQYPGSDAARVAQER 118 (129)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-STTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTSHHHHHHHHH
T ss_pred HHHHHHHHHHHHhccHHHHHHHHHHHHHHCCC-CcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCCCChHHHHHHHH
Confidence 45677899999999999999999999999999 7 8889999999999999999999999999999999998877776
Q ss_pred HHHhCCC
Q 014478 397 CLFSLGM 403 (424)
Q Consensus 397 ~~~~~~~ 403 (424)
+....++
T Consensus 119 l~~l~~~ 125 (129)
T 2xev_A 119 LQSIRLG 125 (129)
T ss_dssp HHHHC--
T ss_pred HHHHHhh
Confidence 6555544
|
| >3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1} | Back alignment and structure |
|---|
Probab=98.75 E-value=2.3e-08 Score=85.35 Aligned_cols=102 Identities=12% Similarity=0.031 Sum_probs=92.5
Q ss_pred HHHHHHHHHhHHHhhCCHHHHHHHHHHHhc------CCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhc---CC---
Q 014478 318 ETLNSKKHGDTAFRAKDFSTAIDCYTQFID------GGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVV---SP--- 385 (424)
Q Consensus 318 ~~~~~~~~g~~~~~~g~~~~A~~~~~~ai~------~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~---~p--- 385 (424)
.+..+...|..++..|++++|+..|.++++ ..+. ...++.++|.+|..+|++++|+..+++++++ .+
T Consensus 25 ~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~-~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~ 103 (203)
T 3gw4_A 25 ASGARFMLGYVYAFMDRFDEARASFQALQQQAQKSGDHTA-EHRALHQVGMVERMAGNWDAARRCFLEERELLASLPEDP 103 (203)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCCHHH-HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCH
T ss_pred HHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHcCCcHH-HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCccH
Confidence 456677889999999999999999999999 8998 8999999999999999999999999999988 44
Q ss_pred -CchHHHHHHHHHHHhCCChHHHHHHHHHHHhchhh
Q 014478 386 -DWPTALYLQAACLFSLGMENDARETLKDGTNLEAK 420 (424)
Q Consensus 386 -~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~ 420 (424)
....+++++|.++..+|++++|+..+++++++.+.
T Consensus 104 ~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~ 139 (203)
T 3gw4_A 104 LAASANAYEVATVALHFGDLAGARQEYEKSLVYAQQ 139 (203)
T ss_dssp HHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHh
Confidence 34678999999999999999999999999987543
|
| >2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis} | Back alignment and structure |
|---|
Probab=98.75 E-value=2.3e-08 Score=77.33 Aligned_cols=82 Identities=11% Similarity=-0.042 Sum_probs=70.1
Q ss_pred HHHHHHHHhHHHhhCCHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhcCCCch--HHHHHHHH
Q 014478 319 TLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWP--TALYLQAA 396 (424)
Q Consensus 319 ~~~~~~~g~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~--~a~~~~g~ 396 (424)
...+...|..++..|++++|++.|+++++.+|+ +..+|+++|.+|..+|++++|+..|+++++++|++. .+...+..
T Consensus 19 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~l~~ 97 (115)
T 2kat_A 19 MLLRFTLGKTYAEHEQFDAALPHLRAALDFDPT-YSVAWKWLGKTLQGQGDRAGARQAWESGLAAAQSRGDQQVVKELQV 97 (115)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHHHCCC-cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhccccccHHHHHHHHH
Confidence 456778899999999999999999999999999 999999999999999999999999999999998644 44444444
Q ss_pred HHHhC
Q 014478 397 CLFSL 401 (424)
Q Consensus 397 ~~~~~ 401 (424)
.+..+
T Consensus 98 ~l~~l 102 (115)
T 2kat_A 98 FLRRL 102 (115)
T ss_dssp HHHHH
T ss_pred HHHHh
Confidence 44433
|
| >3rjv_A Putative SEL1 repeat protein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 1.65A {Klebsiella pneumoniae subsp} | Back alignment and structure |
|---|
Probab=98.75 E-value=4.7e-08 Score=84.80 Aligned_cols=95 Identities=15% Similarity=-0.026 Sum_probs=69.6
Q ss_pred HHHHHHHHhHHHhhC----CHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHh----cCChHHHHHHHHHHHhcCC--Cch
Q 014478 319 TLNSKKHGDTAFRAK----DFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLM----NDMPQEALGDAMQAQVVSP--DWP 388 (424)
Q Consensus 319 ~~~~~~~g~~~~~~g----~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~----~~~~~~A~~~~~~al~~~p--~~~ 388 (424)
+..+...|..+.. + ++++|++.|++|++ +. +..+++++|.+|.. .+++++|+..|++|++..| +++
T Consensus 50 ~~a~~~lg~~y~~-~g~~~~~~~A~~~~~~A~~--~g-~~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~A~~~~~~~~~~ 125 (212)
T 3rjv_A 50 GDALALLAQLKIR-NPQQADYPQARQLAEKAVE--AG-SKSGEIVLARVLVNRQAGATDVAHAITLLQDAARDSESDAAV 125 (212)
T ss_dssp HHHHHHHHHHTTS-STTSCCHHHHHHHHHHHHH--TT-CHHHHHHHHHHHTCGGGSSCCHHHHHHHHHHHTSSTTSHHHH
T ss_pred HHHHHHHHHHHHc-CCCCCCHHHHHHHHHHHHH--CC-CHHHHHHHHHHHHcCCCCccCHHHHHHHHHHHHHcCCCcchH
Confidence 3445556666666 5 77777777777754 44 67777777877776 7777888888888887777 457
Q ss_pred HHHHHHHHHHHh----CCChHHHHHHHHHHHhc
Q 014478 389 TALYLQAACLFS----LGMENDARETLKDGTNL 417 (424)
Q Consensus 389 ~a~~~~g~~~~~----~~~~~~A~~~~~~al~l 417 (424)
.+++++|.+|.. .+++++|+..|++|+++
T Consensus 126 ~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~A~~~ 158 (212)
T 3rjv_A 126 DAQMLLGLIYASGVHGPEDDVKASEYFKGSSSL 158 (212)
T ss_dssp HHHHHHHHHHHHTSSSSCCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHc
Confidence 788888888888 77788888888887766
|
| >3ly7_A Transcriptional activator CADC; alpha/beta domain, alpha domain, DNA-binding, transcription regulation, transmembrane; 1.80A {Escherichia coli} PDB: 3lya_A 3ly8_A 3ly9_A | Back alignment and structure |
|---|
Probab=98.74 E-value=8.5e-08 Score=88.77 Aligned_cols=68 Identities=15% Similarity=0.119 Sum_probs=57.3
Q ss_pred CHHHHHHHHHHHHhcCChHHHHHHHHHHHhcCCCchHHHHHHHHHHHhCCChHHHHHHHHHHHhchhhc
Q 014478 353 SPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAACLFSLGMENDARETLKDGTNLEAKK 421 (424)
Q Consensus 353 ~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~ 421 (424)
.+.++.-++..+...|++++|+..+++|+.++|+ ..+|..+|.++...|++++|++.|.+|+.++|..
T Consensus 276 ~a~~~~alal~~l~~gd~d~A~~~l~rAl~Ln~s-~~a~~llG~~~~~~G~~~eA~e~~~~AlrL~P~~ 343 (372)
T 3ly7_A 276 LSIIYQIKAVSALVKGKTDESYQAINTGIDLEMS-WLNYVLLGKVYEMKGMNREAADAYLTAFNLRPGA 343 (372)
T ss_dssp CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCCC-HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSCSH
T ss_pred CHHHHHHHHHHHHhCCCHHHHHHHHHHHHhcCCC-HHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCc
Confidence 3333444555555679999999999999999975 6788999999999999999999999999999963
|
| >3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus} | Back alignment and structure |
|---|
Probab=98.73 E-value=1.9e-08 Score=92.54 Aligned_cols=101 Identities=11% Similarity=0.023 Sum_probs=59.6
Q ss_pred HHHHHHHhHHHhhCCHHHHHHHHHHHhcCCCCC-----CHHHHHHHHHHHHhcCChHHHHHHHHHHHhcCCCc------h
Q 014478 320 LNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMV-----SPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDW------P 388 (424)
Q Consensus 320 ~~~~~~g~~~~~~g~~~~A~~~~~~ai~~~p~~-----~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~------~ 388 (424)
..+...|..++..|++++|++.|+++++..+.. ...++.++|.+|...|++++|+..+++++++.++. .
T Consensus 184 ~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~ 263 (338)
T 3ro2_A 184 RAFGNLGNTHYLLGNFRDAVIAHEQRLLIAKEFGDKAAERRAYSNLGNAYIFLGEFETASEYYKKTLLLARQLKDRAVEA 263 (338)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhhcchhHHH
Confidence 344555666666666666666666666554320 11256666666666666666666666666655544 5
Q ss_pred HHHHHHHHHHHhCCChHHHHHHHHHHHhchhh
Q 014478 389 TALYLQAACLFSLGMENDARETLKDGTNLEAK 420 (424)
Q Consensus 389 ~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~ 420 (424)
.+++.+|.++..+|++++|+..|++++++.+.
T Consensus 264 ~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~ 295 (338)
T 3ro2_A 264 QSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQE 295 (338)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHh
Confidence 56666666666666666666666666655443
|
| >3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A* | Back alignment and structure |
|---|
Probab=98.71 E-value=4.6e-08 Score=94.21 Aligned_cols=101 Identities=12% Similarity=0.026 Sum_probs=84.2
Q ss_pred HHHHHHHHhHHHhhCCHHHHHHHHHHHhcCC-----CC--CCHHHHHHHHHHHHhcCChHHHHHHHHHHHhc--------
Q 014478 319 TLNSKKHGDTAFRAKDFSTAIDCYTQFIDGG-----TM--VSPTVYARRCLSYLMNDMPQEALGDAMQAQVV-------- 383 (424)
Q Consensus 319 ~~~~~~~g~~~~~~g~~~~A~~~~~~ai~~~-----p~--~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~-------- 383 (424)
+..+......+..+|+|++|++.|+++++.. |+ .-...+.|+|.+|..+|+|++|+..+++++++
T Consensus 287 ~~~ll~~ie~~~~~g~~~~a~~~~~~~L~~~~~~lg~~h~~~~~~~~~L~~~y~~~g~~~eA~~~~~~~L~i~~~~lg~~ 366 (429)
T 3qwp_A 287 VQESLKKIEELKAHWKWEQVLAMCQAIISSNSERLPDINIYQLKVLDCAMDACINLGLLEEALFYGTRTMEPYRIFFPGS 366 (429)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHTCSSCCCCTTSHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHSCSS
T ss_pred HHHHHHHHHHHHhhccHHHHHHHHHHHHHhccCcCCccchHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhHHHHcCCC
Confidence 3455566667788999999999999999753 33 02478999999999999999999999999965
Q ss_pred CCCchHHHHHHHHHHHhCCChHHHHHHHHHHHhchh
Q 014478 384 SPDWPTALYLQAACLFSLGMENDARETLKDGTNLEA 419 (424)
Q Consensus 384 ~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~ 419 (424)
.|+-+..++++|.+|..+|+|++|+..|++|+++-.
T Consensus 367 Hp~~a~~l~nLa~~~~~~g~~~eA~~~~~~Al~i~~ 402 (429)
T 3qwp_A 367 HPVRGVQVMKVGKLQLHQGMFPQAMKNLRLAFDIMR 402 (429)
T ss_dssp CHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred ChHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHH
Confidence 344455899999999999999999999999998754
|
| >3rjv_A Putative SEL1 repeat protein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 1.65A {Klebsiella pneumoniae subsp} | Back alignment and structure |
|---|
Probab=98.68 E-value=1.3e-07 Score=81.99 Aligned_cols=102 Identities=11% Similarity=-0.078 Sum_probs=88.6
Q ss_pred HHHHHHHHHhHHHh----hCCHHHHHHHHHHHhcCCCC-CCHHHHHHHHHHHHh----cCChHHHHHHHHHHHhcCCCch
Q 014478 318 ETLNSKKHGDTAFR----AKDFSTAIDCYTQFIDGGTM-VSPTVYARRCLSYLM----NDMPQEALGDAMQAQVVSPDWP 388 (424)
Q Consensus 318 ~~~~~~~~g~~~~~----~g~~~~A~~~~~~ai~~~p~-~~~~~~~~~~~~~~~----~~~~~~A~~~~~~al~~~p~~~ 388 (424)
........|..+.. .+++++|++.|++|++..|. ....+++++|.+|.. .+++++|+..|++|+++ |.++
T Consensus 84 ~~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~A~~~~~~~~~~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~A~~~-~~~~ 162 (212)
T 3rjv_A 84 SKSGEIVLARVLVNRQAGATDVAHAITLLQDAARDSESDAAVDAQMLLGLIYASGVHGPEDDVKASEYFKGSSSL-SRTG 162 (212)
T ss_dssp CHHHHHHHHHHHTCGGGSSCCHHHHHHHHHHHTSSTTSHHHHHHHHHHHHHHHHTSSSSCCHHHHHHHHHHHHHT-SCTT
T ss_pred CHHHHHHHHHHHHcCCCCccCHHHHHHHHHHHHHcCCCcchHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHc-CCCH
Confidence 34456677888877 88999999999999999883 148999999999999 88999999999999999 7888
Q ss_pred HHHHHHHHHHHhC-C-----ChHHHHHHHHHHHhchhh
Q 014478 389 TALYLQAACLFSL-G-----MENDARETLKDGTNLEAK 420 (424)
Q Consensus 389 ~a~~~~g~~~~~~-~-----~~~~A~~~~~~al~l~~~ 420 (424)
.+++++|.+|... | ++++|+..|++|.+....
T Consensus 163 ~a~~~Lg~~y~~g~gg~~~~d~~~A~~~~~~A~~~g~~ 200 (212)
T 3rjv_A 163 YAEYWAGMMFQQGEKGFIEPNKQKALHWLNVSCLEGFD 200 (212)
T ss_dssp HHHHHHHHHHHHCBTTTBCCCHHHHHHHHHHHHHHTCH
T ss_pred HHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHHHcCCH
Confidence 9999999999764 3 999999999999987543
|
| >1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A | Back alignment and structure |
|---|
Probab=98.64 E-value=6.5e-08 Score=75.79 Aligned_cols=69 Identities=19% Similarity=0.073 Sum_probs=65.7
Q ss_pred CHHHHHHHHHHHHhcCChHHHHHHHHHHHhcCCCchHHHHHHHHHHHhCCChHHHHHHHHHHHhchhhc
Q 014478 353 SPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAACLFSLGMENDARETLKDGTNLEAKK 421 (424)
Q Consensus 353 ~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~ 421 (424)
....+..+|.++...|++++|+..++++++.+|+++.+++++|.++..+|++++|+..|+++++++|..
T Consensus 3 ~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~ 71 (131)
T 1elr_A 3 QALKEKELGNDAYKKKDFDTALKHYDKAKELDPTNMTYITNQAAVYFEKGDYNKCRELCEKAIEVGREN 71 (131)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHhccHHHHHHHHHHHHhhcccc
Confidence 467889999999999999999999999999999999999999999999999999999999999998864
|
| >1klx_A Cysteine rich protein B; structural genomics, helix-turn-helix, right handed super helix, modular structure', hydrolase; 1.95A {Helicobacter pylori} SCOP: a.118.18.1 | Back alignment and structure |
|---|
Probab=98.63 E-value=4.1e-07 Score=72.98 Aligned_cols=90 Identities=9% Similarity=-0.085 Sum_probs=83.3
Q ss_pred HHhHHHhhCCHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHh----cCChHHHHHHHHHHHhcCCCchHHHHHHHHHHHh
Q 014478 325 HGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLM----NDMPQEALGDAMQAQVVSPDWPTALYLQAACLFS 400 (424)
Q Consensus 325 ~g~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~----~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~ 400 (424)
.|..+...+..++|++.|++|.+. . +..+++++|.+|.. .+++++|+..|++|.+. .++.+++++|.+|..
T Consensus 31 lg~~y~~g~~~~~A~~~~~~Aa~~--g-~~~a~~~Lg~~y~~G~g~~~d~~~A~~~~~~Aa~~--g~~~a~~~Lg~~y~~ 105 (138)
T 1klx_A 31 LSLVSNSQINKQKLFQYLSKACEL--N-SGNGCRFLGDFYENGKYVKKDLRKAAQYYSKACGL--NDQDGCLILGYKQYA 105 (138)
T ss_dssp HHHHTCTTSCHHHHHHHHHHHHHT--T-CHHHHHHHHHHHHHCSSSCCCHHHHHHHHHHHHHT--TCHHHHHHHHHHHHH
T ss_pred HHHHHHcCCCHHHHHHHHHHHHcC--C-CHHHHHHHHHHHHcCCCCCccHHHHHHHHHHHHcC--CCHHHHHHHHHHHHC
Confidence 777788888899999999999987 4 88999999999998 89999999999999988 789999999999999
Q ss_pred ----CCChHHHHHHHHHHHhchh
Q 014478 401 ----LGMENDARETLKDGTNLEA 419 (424)
Q Consensus 401 ----~~~~~~A~~~~~~al~l~~ 419 (424)
.+++++|+..|++|.+...
T Consensus 106 G~g~~~d~~~A~~~~~~Aa~~g~ 128 (138)
T 1klx_A 106 GKGVVKNEKQAVKTFEKACRLGS 128 (138)
T ss_dssp TSSSCCCHHHHHHHHHHHHHTTC
T ss_pred CCCCCcCHHHHHHHHHHHHHCCC
Confidence 9999999999999998754
|
| >2ooe_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 3.00A {Mus musculus} SCOP: a.118.8.7 | Back alignment and structure |
|---|
Probab=98.59 E-value=2e-07 Score=92.52 Aligned_cols=102 Identities=8% Similarity=-0.139 Sum_probs=80.6
Q ss_pred HHHHHHHHHhHHHh-------hCCHH-------HHHHHHHHHhc-CCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHh
Q 014478 318 ETLNSKKHGDTAFR-------AKDFS-------TAIDCYTQFID-GGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQV 382 (424)
Q Consensus 318 ~~~~~~~~g~~~~~-------~g~~~-------~A~~~~~~ai~-~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~ 382 (424)
....+...|..+.+ .|+++ +|++.|++|++ .+|+ +..+|.+++..+.+.|++++|...|+++++
T Consensus 271 ~~~~w~~~~~~~~~~~~~~~~~g~~~~a~~~~~~A~~~~~~Al~~~~p~-~~~l~~~~~~~~~~~g~~~~A~~~~~~al~ 349 (530)
T 2ooe_A 271 HPDIWYEAAQYLEQSSKLLAEKGDMNNAKLFSDEAANIYERAISTLLKK-NMLLYFAYADYEESRMKYEKVHSIYNRLLA 349 (530)
T ss_dssp CHHHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHTTTTCSS-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhchhhhhccchhhhhhhhHHHHHHHHHHHHHhCcc-cHHHHHHHHHHHHhcCCHHHHHHHHHHHhC
Confidence 34566666776664 68876 88888888887 7888 888888888888888888888888888888
Q ss_pred cCCCch-HHHHHHHHHHHhCCChHHHHHHHHHHHhchhh
Q 014478 383 VSPDWP-TALYLQAACLFSLGMENDARETLKDGTNLEAK 420 (424)
Q Consensus 383 ~~p~~~-~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~ 420 (424)
++|+++ .+|.++|.++..+|++++|++.|++|++..|.
T Consensus 350 ~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~~~~~ 388 (530)
T 2ooe_A 350 IEDIDPTLVYIQYMKFARRAEGIKSGRMIFKKAREDART 388 (530)
T ss_dssp SSSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCTTC
T ss_pred ccccCchHHHHHHHHHHHHhcCHHHHHHHHHHHHhccCC
Confidence 888875 58888888888788888888888888776553
|
| >4f3v_A ESX-1 secretion system protein ECCA1; tetratricopeptide repeat, TPR domain, ATPase, protein secret protein transport; 2.00A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=98.57 E-value=1.2e-07 Score=84.95 Aligned_cols=97 Identities=9% Similarity=0.068 Sum_probs=85.4
Q ss_pred HHHHHHHhHHHhhCCHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhcCCCc--hHHHHHHHHH
Q 014478 320 LNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDW--PTALYLQAAC 397 (424)
Q Consensus 320 ~~~~~~g~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~--~~a~~~~g~~ 397 (424)
...+..|..+...|+|++|.+.|+.++...|+ .. .++.+|.++.+.++|++|+..+++++...+.. ..+++++|.+
T Consensus 103 dl~LayA~~L~~~g~y~eA~~~l~~~~~~~p~-~~-~~~~~a~l~~~~~r~~dA~~~l~~a~~~~d~~~~~~a~~~LG~a 180 (282)
T 4f3v_A 103 AITMGFAACEAAQGNYADAMEALEAAPVAGSE-HL-VAWMKAVVYGAAERWTDVIDQVKSAGKWPDKFLAGAAGVAHGVA 180 (282)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHTSSCCTTCH-HH-HHHHHHHHHHHTTCHHHHHHHHTTGGGCSCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCc-hH-HHHHHHHHHHHcCCHHHHHHHHHHhhccCCcccHHHHHHHHHHH
Confidence 34556788899999999999999999999998 66 99999999999999999999999887764222 4589999999
Q ss_pred HHhCCChHHHHHHHHHHHhch
Q 014478 398 LFSLGMENDARETLKDGTNLE 418 (424)
Q Consensus 398 ~~~~~~~~~A~~~~~~al~l~ 418 (424)
+..+|++++|+..|++++.-+
T Consensus 181 l~~LG~~~eAl~~l~~a~~g~ 201 (282)
T 4f3v_A 181 AANLALFTEAERRLTEANDSP 201 (282)
T ss_dssp HHHTTCHHHHHHHHHHHHTST
T ss_pred HHHCCCHHHHHHHHHHHhcCC
Confidence 999999999999999998543
|
| >1hz4_A MALT regulatory protein; two-helix bundles, helix repeats, protein superhelix, transc activator; 1.45A {Escherichia coli} SCOP: a.118.8.2 | Back alignment and structure |
|---|
Probab=98.51 E-value=2.1e-07 Score=87.74 Aligned_cols=98 Identities=17% Similarity=0.097 Sum_probs=85.9
Q ss_pred HHHHHhHHHhhCCHHHHHHHHHHHhcCC--------CCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhcCCCc-----h
Q 014478 322 SKKHGDTAFRAKDFSTAIDCYTQFIDGG--------TMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDW-----P 388 (424)
Q Consensus 322 ~~~~g~~~~~~g~~~~A~~~~~~ai~~~--------p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~-----~ 388 (424)
+...|..++..|++++|++.|+++++.. |. ...++.++|.+|...|++++|+..+++++.+.|.. .
T Consensus 96 ~~~la~~~~~~G~~~~A~~~~~~al~~~~~~~~~~~~~-~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~ 174 (373)
T 1hz4_A 96 LIQQSEILFAQGFLQTAWETQEKAFQLINEQHLEQLPM-HEFLVRIRAQLLWAWARLDEAEASARSGIEVLSSYQPQQQL 174 (373)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCTTSTH-HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTTTSCGGGGH
T ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhccccCcH-HHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhhccCcHHHH
Confidence 4578899999999999999999999865 22 45678889999999999999999999999999863 4
Q ss_pred HHHHHHHHHHHhCCChHHHHHHHHHHHhchhh
Q 014478 389 TALYLQAACLFSLGMENDARETLKDGTNLEAK 420 (424)
Q Consensus 389 ~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~ 420 (424)
.++.++|.++..+|++++|...+++++++.+.
T Consensus 175 ~~~~~la~~~~~~g~~~~A~~~l~~a~~~~~~ 206 (373)
T 1hz4_A 175 QCLAMLIQCSLARGDLDNARSQLNRLENLLGN 206 (373)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhc
Confidence 68899999999999999999999999988654
|
| >2ooe_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 3.00A {Mus musculus} SCOP: a.118.8.7 | Back alignment and structure |
|---|
Probab=98.50 E-value=6.2e-07 Score=89.04 Aligned_cols=98 Identities=14% Similarity=0.050 Sum_probs=65.7
Q ss_pred HHHHHHhHHHhhCCHHHHHHHHHHHhcCCCCCCHHHHHHHHHH-HHhcCChHHHHHHHHHHHhcCCCchHHHHHHHHHHH
Q 014478 321 NSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLS-YLMNDMPQEALGDAMQAQVVSPDWPTALYLQAACLF 399 (424)
Q Consensus 321 ~~~~~g~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~-~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~ 399 (424)
.+...|....+.|++++|.+.|.+|++..|. ....+...+.. +...|++++|...|+++++.+|+++.+|..+|.++.
T Consensus 358 ~~~~~~~~~~~~~~~~~A~~~~~~Al~~~~~-~~~~~~~~a~~~~~~~~~~~~A~~~~e~al~~~p~~~~~~~~~~~~~~ 436 (530)
T 2ooe_A 358 VYIQYMKFARRAEGIKSGRMIFKKAREDART-RHHVYVTAALMEYYCSKDKSVAFKIFELGLKKYGDIPEYVLAYIDYLS 436 (530)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTCTTC-CTHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHTTCHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHhccCC-chHHHHHHHHHHHHHcCChhHHHHHHHHHHHHCCCCHHHHHHHHHHHH
Confidence 4445555555666666666666666666655 44444443332 345777777777777777777777777777777777
Q ss_pred hCCChHHHHHHHHHHHhchh
Q 014478 400 SLGMENDARETLKDGTNLEA 419 (424)
Q Consensus 400 ~~~~~~~A~~~~~~al~l~~ 419 (424)
.+|++++|+..|++|++..|
T Consensus 437 ~~g~~~~Ar~~~~~al~~~~ 456 (530)
T 2ooe_A 437 HLNEDNNTRVLFERVLTSGS 456 (530)
T ss_dssp TTTCHHHHHHHHHHHHHSCC
T ss_pred hCCCHhhHHHHHHHHHhccC
Confidence 77788888888877777643
|
| >3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A* | Back alignment and structure |
|---|
Probab=98.49 E-value=4.6e-07 Score=83.30 Aligned_cols=119 Identities=14% Similarity=0.046 Sum_probs=81.5
Q ss_pred cceecccccCCCchhhhHHHHHHHHHhcCCCc---CcceeEEEEE-eCCeeeEEEecCCCCCHHhHhccCCCCCCCHHHH
Q 014478 14 HCHLKSSVLESSDLGETLNLEEAKAVGNLRSE---RLANLIGCCY-EADERLLVAEFMPNETLAKHLFHWETQPMKWAMR 89 (424)
Q Consensus 14 ~~~v~~~~~~~~~~~~~~~~~E~~~l~~l~h~---~iv~~~~~~~-~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~ 89 (424)
+..+.+++. ........+.+|+++|+.|.+. .+++++.++. ..+..++|||+++|.+|.+... ..++..+.
T Consensus 39 g~~~VlR~~-~~~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~~g~~~~v~e~i~G~~l~~~~~----~~l~~~~~ 113 (306)
T 3tdw_A 39 NGDWVFRFP-KSQQGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRSDGNPFVGYRKVQGQILGEDGM----AVLPDDAK 113 (306)
T ss_dssp TTTEEEEEE-SSHHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECTTSCEEEEEECCCSEECHHHHH----TTSCHHHH
T ss_pred CCEEEEEec-CCchHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccCCCceEEEEeccCCeECchhhh----hhCCHHHH
Confidence 444444442 3333456788999999999642 3777888875 3455789999999998876421 13455555
Q ss_pred HHHHHHHHHHHHHHHhCC-----------------------------------------------------------Ccc
Q 014478 90 LRVALYLAQALEYCSSKG-----------------------------------------------------------RAL 110 (424)
Q Consensus 90 ~~i~~qi~~~L~~lH~~~-----------------------------------------------------------~iv 110 (424)
..++.++...|..||+.. .++
T Consensus 114 ~~~~~~lg~~La~LH~~~~~~~~~~g~p~~~w~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~l~~~~~~~~~~~~~ 193 (306)
T 3tdw_A 114 DRLALQLAEFMNELSAFPVETAISAGVPVTNLKNKILLLSEAVEDQVFPLLDESLRDYLTLRFQSYMTHPVYTRYTPRLI 193 (306)
T ss_dssp HHHHHHHHHHHHHHHHSCHHHHHHTTCCBCCHHHHHHHHHHHHHHHTGGGSCHHHHHHHHHHHHHHHHCHHHHCCCCEEE
T ss_pred HHHHHHHHHHHHHHhcCCcccccccCCChHHHHHHHHHHHHHHHHhcccccchhhHHHHHHHHHHHHhCcccccCCCeeE
Confidence 566666666666665421 058
Q ss_pred cccCCCCCeeecC---CCCe-EEcccccccc
Q 014478 111 YHDLNAYRILFDK---DGNP-RLSSFGLMKN 137 (424)
Q Consensus 111 H~dikp~Nill~~---~~~~-kl~Dfg~~~~ 137 (424)
|+|++|.||+++. ++.+ .|+||+.+..
T Consensus 194 HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~~ 224 (306)
T 3tdw_A 194 HGDLSPDHFLTNLNSRQTPLTGIIDFGDAAI 224 (306)
T ss_dssp CSCCSGGGEEECTTCSSCCEEEECCCTTCEE
T ss_pred eCCCCcccEEEecCCCCCceEEEEehhhcCC
Confidence 9999999999987 4554 8999987654
|
| >1hz4_A MALT regulatory protein; two-helix bundles, helix repeats, protein superhelix, transc activator; 1.45A {Escherichia coli} SCOP: a.118.8.2 | Back alignment and structure |
|---|
Probab=98.49 E-value=5.1e-07 Score=85.08 Aligned_cols=66 Identities=8% Similarity=-0.110 Sum_probs=43.9
Q ss_pred HHHHHHhHHHhhCCHHHHHHHHHHHhcCCCCC----CHHHHHHHHHHHHhcCChHHHHHHHHHHHhcCCC
Q 014478 321 NSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMV----SPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPD 386 (424)
Q Consensus 321 ~~~~~g~~~~~~g~~~~A~~~~~~ai~~~p~~----~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~ 386 (424)
.+...|..++..|++++|+..|.++++..+.. ...++.++|.++...|++++|+..+++++.+.+.
T Consensus 137 ~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~l~~a~~~~~~ 206 (373)
T 1hz4_A 137 LVRIRAQLLWAWARLDEAEASARSGIEVLSSYQPQQQLQCLAMLIQCSLARGDLDNARSQLNRLENLLGN 206 (373)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHTTTSCGGGGHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHHHhhccCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhc
Confidence 34456667777777777777777777665531 2345667777777777777777777777776544
|
| >4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A* | Back alignment and structure |
|---|
Probab=98.47 E-value=3.9e-07 Score=82.17 Aligned_cols=103 Identities=16% Similarity=0.035 Sum_probs=75.5
Q ss_pred hhHHHHHHHHHhcCC-CcCcceeEEEEEeCCeeeEEEecCCCCCHHhHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhC-
Q 014478 29 ETLNLEEAKAVGNLR-SERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSK- 106 (424)
Q Consensus 29 ~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~- 106 (424)
...+.+|...|+.+. +-.++++++++.+++..++|||+++|.++.+.... .......+..++...|.-||..
T Consensus 63 ~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~~~~lvme~l~G~~~~~~~~~------~~~~~~~~~~~l~~~L~~Lh~~~ 136 (272)
T 4gkh_A 63 ANDVTDEMVRLNWLTAFMPLPTIKHFIRTPDDAWLLTTAIPGKTAFQVLEE------YPDSGENIVDALAVFLRRLHSIP 136 (272)
T ss_dssp HHHHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCCSEEHHHHHHH------CGGGHHHHHHHHHHHHHHHHTSC
T ss_pred HhHHHHHHHHHHHhccCCCcCeEEEEEEECCeEEEEEEeeCCccccccccC------CHHHHHHHHHHHHHHHHHhcCCC
Confidence 456788999998883 44488999999999999999999999888775421 1122334555555556555531
Q ss_pred ------------------------------------------------------CC--cccccCCCCCeeecCCCCeEEc
Q 014478 107 ------------------------------------------------------GR--ALYHDLNAYRILFDKDGNPRLS 130 (424)
Q Consensus 107 ------------------------------------------------------~~--ivH~dikp~Nill~~~~~~kl~ 130 (424)
.+ ++|+|+.+.||+++.++.+-|+
T Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~HGDl~~~Nil~~~~~~~~vi 216 (272)
T 4gkh_A 137 VCNCPFNSDRVFRLAQAQSRMNNGLVDASDFDDERNGWPVEQVWKEMHKLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCI 216 (272)
T ss_dssp GGGCCBBCCHHHHHHHHHHHHHTTCCCGGGCCGGGTTCCHHHHHHHHHTTCCCCCCEEEECSCCCTTSEEEETTEEEEEC
T ss_pred cccCCcCcccccchhhHHHHHHHhhhhhhhccccccchHHHHHHHHHHhcccccCCcEEEcCCCCCCeEEEECCeEEEEE
Confidence 01 6899999999999987767799
Q ss_pred ccccccc
Q 014478 131 SFGLMKN 137 (424)
Q Consensus 131 Dfg~~~~ 137 (424)
||+.+..
T Consensus 217 Dwe~a~~ 223 (272)
T 4gkh_A 217 DVGRVGI 223 (272)
T ss_dssp CCTTCEE
T ss_pred ECccccc
Confidence 9987553
|
| >3u64_A Protein TP_0956; tetratrico peptide repeat, protein-prote interaction, syphilis, lipoprotein, transport protein; 2.30A {Treponema pallidum subsp} PDB: 4di3_A 4di4_A* | Back alignment and structure |
|---|
Probab=98.44 E-value=7e-07 Score=79.35 Aligned_cols=87 Identities=13% Similarity=0.016 Sum_probs=79.1
Q ss_pred CHHHHHHHHHHHhcCCCC-CCHHHHHHHHHHHHhc-----CChHHHHHHHHHHHhcCCCc-hHHHHHHHHHHHh-CCChH
Q 014478 334 DFSTAIDCYTQFIDGGTM-VSPTVYARRCLSYLMN-----DMPQEALGDAMQAQVVSPDW-PTALYLQAACLFS-LGMEN 405 (424)
Q Consensus 334 ~~~~A~~~~~~ai~~~p~-~~~~~~~~~~~~~~~~-----~~~~~A~~~~~~al~~~p~~-~~a~~~~g~~~~~-~~~~~ 405 (424)
....|...+++||++||+ .+..+|.-+|..|.+. |+.++|...|++||+++|+. ..+++..|..+.. +|+++
T Consensus 178 ~l~~A~a~lerAleLDP~~~~GsA~~~LG~lY~~vPp~~gGd~ekA~~~ferAL~LnP~~~id~~v~YA~~l~~~~gd~~ 257 (301)
T 3u64_A 178 TVHAAVMMLERACDLWPSYQEGAVWNVLTKFYAAAPESFGGGMEKAHTAFEHLTRYCSAHDPDHHITYADALCIPLNNRA 257 (301)
T ss_dssp HHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHHHHSCTTTTCCHHHHHHHHHHHHHHCCTTCSHHHHHHHHHTTTTTTCHH
T ss_pred hHHHHHHHHHHHHHhCCCcccCHHHHHHHHHHHhCCCccCCCHHHHHHHHHHHHHhCCCCCchHHHHHHHHHHHhcCCHH
Confidence 367899999999999998 2346999999999995 99999999999999999975 9999999999988 59999
Q ss_pred HHHHHHHHHHhchhh
Q 014478 406 DARETLKDGTNLEAK 420 (424)
Q Consensus 406 ~A~~~~~~al~l~~~ 420 (424)
+|...+++|++.+|.
T Consensus 258 ~a~~~L~kAL~a~p~ 272 (301)
T 3u64_A 258 GFDEALDRALAIDPE 272 (301)
T ss_dssp HHHHHHHHHHHCCGG
T ss_pred HHHHHHHHHHcCCCC
Confidence 999999999999986
|
| >2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A | Back alignment and structure |
|---|
Probab=98.40 E-value=1.3e-06 Score=66.22 Aligned_cols=69 Identities=12% Similarity=-0.133 Sum_probs=62.4
Q ss_pred CHHHHHHHHHHHHhcCChHHHHHHHHHHHhcC-------CCchHHHHHHHHHHHhCCChHHHHHHHHHHHhchhhc
Q 014478 353 SPTVYARRCLSYLMNDMPQEALGDAMQAQVVS-------PDWPTALYLQAACLFSLGMENDARETLKDGTNLEAKK 421 (424)
Q Consensus 353 ~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~-------p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~ 421 (424)
.+.-.+.+|..+++.++|..|+..+++|++.. +.....+.++|.+++++|++++|+..+++|++++|.+
T Consensus 4 sa~dc~~lG~~~~~~~~y~~A~~W~~~Al~~~~~~~~~~~~~~~i~~~L~~~~~~~g~~~~A~~~~~~al~l~P~~ 79 (104)
T 2v5f_A 4 TAEDCFELGKVAYTEADYYHTELWMEQALRQLDEGEISTIDKVSVLDYLSYAVYQQGDLDKALLLTKKLLELDPEH 79 (104)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCCCSSCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC
T ss_pred CHHHHHHHHHHHHHccchHHHHHHHHHHHHhhhccCCCcccHHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCCCC
Confidence 34567889999999999999999999999863 4578899999999999999999999999999999975
|
| >3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus} | Back alignment and structure |
|---|
Probab=98.31 E-value=8.8e-07 Score=86.54 Aligned_cols=101 Identities=11% Similarity=0.022 Sum_probs=85.3
Q ss_pred HHHHHHHHHHhHHHhhCCHHHHHHHHHHHhcC-----CCC--CCHHHHHHHHHHHHhcCChHHHHHHHHHHHhc-----C
Q 014478 317 QETLNSKKHGDTAFRAKDFSTAIDCYTQFIDG-----GTM--VSPTVYARRCLSYLMNDMPQEALGDAMQAQVV-----S 384 (424)
Q Consensus 317 ~~~~~~~~~g~~~~~~g~~~~A~~~~~~ai~~-----~p~--~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~-----~ 384 (424)
..+..+...|..|..+|+|++|+..|.++++. .|+ +-...++|+|.+|..+|++++|+..|++|+++ .
T Consensus 349 ~~a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~~lG~~Hp~~a~~l~nLa~~~~~~G~~~eA~~~~~~Al~i~~~~lG 428 (490)
T 3n71_A 349 YVLRLLSIASEVLSYLQAYEEASHYARRMVDGYMKLYHHNNAQLGMAVMRAGLTNWHAGHIEVGHGMICKAYAILLVTHG 428 (490)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHhC
Confidence 34556778899999999999999999999964 233 14578999999999999999999999999965 5
Q ss_pred CCch---HHHHHHHHHHHhCCChHHHHHHHHHHHhc
Q 014478 385 PDWP---TALYLQAACLFSLGMENDARETLKDGTNL 417 (424)
Q Consensus 385 p~~~---~a~~~~g~~~~~~~~~~~A~~~~~~al~l 417 (424)
|+++ +...+++.++.+++.|++|...|+++.+-
T Consensus 429 ~~Hp~~~~~~~~l~~~~~e~~~~~~ae~~~~~~~~~ 464 (490)
T 3n71_A 429 PSHPITKDLEAMRMQTEMELRMFRQNEFMYHKMREA 464 (490)
T ss_dssp TTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6654 46678899999999999999999998753
|
| >2xm6_A Protein corresponding to locus C5321 from CFT073 strain; unknown function, SEL1-like repeats; 1.68A {Escherichia coli} | Back alignment and structure |
|---|
Probab=98.30 E-value=4.8e-06 Score=81.71 Aligned_cols=95 Identities=11% Similarity=-0.020 Sum_probs=82.5
Q ss_pred HHHHHHHhHHHhhC---CHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHh----cCChHHHHHHHHHHHhcCCCchHHHH
Q 014478 320 LNSKKHGDTAFRAK---DFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLM----NDMPQEALGDAMQAQVVSPDWPTALY 392 (424)
Q Consensus 320 ~~~~~~g~~~~~~g---~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~----~~~~~~A~~~~~~al~~~p~~~~a~~ 392 (424)
......|..++..| ++++|++.|+++++. . +..+++++|.+|.. .+++++|+..|++|++. .++.+++
T Consensus 329 ~a~~~lg~~y~~~g~~~~~~~A~~~~~~a~~~--~-~~~a~~~Lg~~y~~g~g~~~~~~~A~~~~~~A~~~--~~~~a~~ 403 (490)
T 2xm6_A 329 TAQANLGAIYFRLGSEEEHKKAVEWFRKAAAK--G-EKAAQFNLGNALLQGKGVKKDEQQAAIWMRKAAEQ--GLSAAQV 403 (490)
T ss_dssp HHHHHHHHHHHHSCCHHHHHHHHHHHHHHHHT--T-CHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHT--TCHHHHH
T ss_pred HHHHHHHHHHHhCCCcccHHHHHHHHHHHHHC--C-CHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHhC--CCHHHHH
Confidence 34556677777655 899999999999987 4 78899999999999 89999999999999986 4789999
Q ss_pred HHHHHHHh----CCChHHHHHHHHHHHhchh
Q 014478 393 LQAACLFS----LGMENDARETLKDGTNLEA 419 (424)
Q Consensus 393 ~~g~~~~~----~~~~~~A~~~~~~al~l~~ 419 (424)
++|.+|.. .+++++|+..|++|++.+|
T Consensus 404 ~Lg~~y~~g~g~~~d~~~A~~~~~~A~~~~~ 434 (490)
T 2xm6_A 404 QLGEIYYYGLGVERDYVQAWAWFDTASTNDM 434 (490)
T ss_dssp HHHHHHHHTSSSCCCHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHcCCCCCCCHHHHHHHHHHHHHCCC
Confidence 99999998 8999999999999999883
|
| >3e4b_A ALGK; tetratricopeptide repeat, superhelix, alginate biosynt pseudomonas, protein binding; 2.50A {Pseudomonas fluorescens} | Back alignment and structure |
|---|
Probab=98.30 E-value=2.8e-06 Score=82.64 Aligned_cols=93 Identities=11% Similarity=0.025 Sum_probs=57.3
Q ss_pred HHHHHHhHHHhhC---CHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHhc----CChHHHHHHHHHHHhcCCCchHHHHH
Q 014478 321 NSKKHGDTAFRAK---DFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMN----DMPQEALGDAMQAQVVSPDWPTALYL 393 (424)
Q Consensus 321 ~~~~~g~~~~~~g---~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~----~~~~~A~~~~~~al~~~p~~~~a~~~ 393 (424)
.....|..+...| ++++|++.|.++++..|. ....++++|.+|... +++++|+..|+++. |.++.++++
T Consensus 178 a~~~Lg~~~~~~g~~~~~~~A~~~~~~aa~~g~~-~a~~~~~Lg~~y~~g~~~~~d~~~A~~~~~~aa---~g~~~a~~~ 253 (452)
T 3e4b_A 178 CYVELATVYQKKQQPEQQAELLKQMEAGVSRGTV-TAQRVDSVARVLGDATLGTPDEKTAQALLEKIA---PGYPASWVS 253 (452)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCS-CHHHHHHHHHHHTCGGGSSCCHHHHHHHHHHHG---GGSTHHHHH
T ss_pred HHHHHHHHHHHcCCcccHHHHHHHHHHHHHCCCH-HHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHc---CCCHHHHHH
Confidence 3445555666666 666666666666666666 566556666666554 56666666666665 666666666
Q ss_pred HHHH-H--HhCCChHHHHHHHHHHHhc
Q 014478 394 QAAC-L--FSLGMENDARETLKDGTNL 417 (424)
Q Consensus 394 ~g~~-~--~~~~~~~~A~~~~~~al~l 417 (424)
+|.+ + ...+++++|+..|++|.+.
T Consensus 254 Lg~~~~~~~~~~d~~~A~~~~~~Aa~~ 280 (452)
T 3e4b_A 254 LAQLLYDFPELGDVEQMMKYLDNGRAA 280 (452)
T ss_dssp HHHHHHHSGGGCCHHHHHHHHHHHHHT
T ss_pred HHHHHHhCCCCCCHHHHHHHHHHHHHC
Confidence 6666 3 3556666666666666544
|
| >3bee_A Putative YFRE protein; putaive YFRE protein, structural GE PSI-2, protein structure initiative; 2.15A {Vibrio parahaemolyticus rimd 2210633} | Back alignment and structure |
|---|
Probab=98.29 E-value=2.4e-06 Score=63.22 Aligned_cols=69 Identities=7% Similarity=-0.113 Sum_probs=61.5
Q ss_pred HHHHHHHHhHHHhhCC---HHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhcCCCch
Q 014478 319 TLNSKKHGDTAFRAKD---FSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWP 388 (424)
Q Consensus 319 ~~~~~~~g~~~~~~g~---~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~ 388 (424)
+..+...|..++..++ .++|...+.+|++++|+ +..++..+|..+++.|+|++|+..++++++.+|..+
T Consensus 6 ~~~~~~~a~al~~~~~~~~~~~A~~~l~~AL~~dp~-~~rA~~~lg~~~~~~g~y~~Ai~~w~~~l~~~p~~~ 77 (93)
T 3bee_A 6 ATQLAAKATTLYYLHKQAMTDEVSLLLEQALQLEPY-NEAALSLIANDHFISFRFQEAIDTWVLLLDSNDPNL 77 (93)
T ss_dssp HHHHHHHHHHHHHTTTTCCCHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHTCCCTTC
T ss_pred HHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHCcC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCc
Confidence 4556677888865554 79999999999999999 999999999999999999999999999999999843
|
| >1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A | Back alignment and structure |
|---|
Probab=98.27 E-value=1.1e-05 Score=85.92 Aligned_cols=63 Identities=17% Similarity=0.204 Sum_probs=59.1
Q ss_pred CHHHHHHHHHHHHhcCChHHHHHHHHHHHhcCCCchHHHHHHHHHHHhCCChHHHHHHHHHHHhchhh
Q 014478 353 SPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAACLFSLGMENDARETLKDGTNLEAK 420 (424)
Q Consensus 353 ~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~ 420 (424)
.+.+|+++|.++.+.|++++|+..|.+| +++.+|++.|.++.++|+|++|+++|..|.+.++.
T Consensus 1104 ~p~vWsqLAKAql~~G~~kEAIdsYiKA-----dD~say~eVa~~~~~lGkyEEAIeyL~mArk~~~e 1166 (1630)
T 1xi4_A 1104 EPAVWSQLAKAQLQKGMVKEAIDSYIKA-----DDPSSYMEVVQAANTSGNWEELVKYLQMARKKARE 1166 (1630)
T ss_pred CHHHHHHHHHHHHhCCCHHHHHHHHHhc-----CChHHHHHHHHHHHHcCCHHHHHHHHHHHHhhccc
Confidence 6889999999999999999999999886 99999999999999999999999999999987743
|
| >2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A | Back alignment and structure |
|---|
Probab=98.25 E-value=2.8e-06 Score=72.10 Aligned_cols=142 Identities=12% Similarity=0.047 Sum_probs=94.7
Q ss_pred CCHHhHhccCCCCCCCHHHHHHHHHHHHHHHHHHHh-CCCcccccCCCCCeeecCCCCeEEccccccccCCCCCccccCc
Q 014478 70 ETLAKHLFHWETQPMKWAMRLRVALYLAQALEYCSS-KGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNL 148 (424)
Q Consensus 70 gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~-~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~gt~ 148 (424)
-||.++|.. .+.+++++++|.++.|.+..|.-+-. +. -..+=+.|..|++..+|.|.+.+ +. ......
T Consensus 33 vSL~eIL~~-~~~PlsEEqaWALc~Qc~~~L~~~~~~~~-~~~~i~~~~~i~l~~dG~V~f~~-~~--------s~~~~~ 101 (229)
T 2yle_A 33 LSLEEILRL-YNQPINEEQAWAVCYQCCGSLRAAARRRQ-PRHRVRSAAQIRVWRDGAVTLAP-AA--------DDAGEP 101 (229)
T ss_dssp EEHHHHHHH-HTSCCCHHHHHHHHHHHHHHHHHHHHTTC-CCCCCCSGGGEEEETTSCEEECC-C---------------
T ss_pred ccHHHHHHH-cCCCcCHHHHHHHHHHHHHHHHhhhhccc-CCceecCCcceEEecCCceeccc-cc--------cccccc
Confidence 389999865 47899999999999999999877622 22 12333457899999999997764 11 111233
Q ss_pred cCCCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHHHHHHHHHhccc-
Q 014478 149 AFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQS- 227 (424)
Q Consensus 149 ~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~- 227 (424)
.+.|||... ...+.+.-|||||+++|.-+--..+ ...+..+++.|.+||..|...
T Consensus 102 ~~~~pe~~~-~~~te~~~IysLG~tLY~ALDygL~-----------------------e~eE~eLS~~LE~LL~~Mt~~~ 157 (229)
T 2yle_A 102 PPVAGKLGY-SQCMETEVIESLGIIIYKALDYGLK-----------------------ENEERELSPPLEQLIDHMANTV 157 (229)
T ss_dssp -----CCSS-SSSCHHHHHHHHHHHHHHHHTTTCC-----------------------TTEEECCCHHHHHHHHHHTTCC
T ss_pred CCCChhhcc-ccchHHHHHHHHHHHHHHHhhcCCC-----------------------cccchhhCHHHHHHHHHHHhcc
Confidence 566888764 3455678899999999998855422 122345677899999998765
Q ss_pred ------------------------CcCCCCCHHHHHHHHHHHh
Q 014478 228 ------------------------EARERPNAKSLVISLMSLQ 246 (424)
Q Consensus 228 ------------------------dp~~Rps~~~~~~~l~~~~ 246 (424)
.+..|++.++|++.-..-.
T Consensus 158 ~d~~~~DeG~~~~~eg~~d~~~~~~~~~~~sl~~Vi~~C~~hl 200 (229)
T 2yle_A 158 EADGSNDEGYEAAEEGLGDEDEKRKISAIRSYRDVMKLCAAHL 200 (229)
T ss_dssp C--------------------CCSCCCCCCSHHHHHHHHHTTS
T ss_pred cccccccccccccccccccccccccccCcCCHHHHHHHHHhhc
Confidence 2457889999987655433
|
| >1klx_A Cysteine rich protein B; structural genomics, helix-turn-helix, right handed super helix, modular structure', hydrolase; 1.95A {Helicobacter pylori} SCOP: a.118.18.1 | Back alignment and structure |
|---|
Probab=98.22 E-value=5.1e-06 Score=66.51 Aligned_cols=80 Identities=14% Similarity=0.002 Sum_probs=71.5
Q ss_pred hCCHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhcCCCchHHHHHHHHHHHh----CCChHHH
Q 014478 332 AKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAACLFS----LGMENDA 407 (424)
Q Consensus 332 ~g~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~----~~~~~~A 407 (424)
.+++++|++.|+++.+.... ... +|.+|...+.+++|+..|++|.+. .++.+++++|.+|.. .+++++|
T Consensus 8 ~~d~~~A~~~~~~aa~~g~~-~a~----lg~~y~~g~~~~~A~~~~~~Aa~~--g~~~a~~~Lg~~y~~G~g~~~d~~~A 80 (138)
T 1klx_A 8 KKDLKKAIQYYVKACELNEM-FGC----LSLVSNSQINKQKLFQYLSKACEL--NSGNGCRFLGDFYENGKYVKKDLRKA 80 (138)
T ss_dssp HHHHHHHHHHHHHHHHTTCT-THH----HHHHTCTTSCHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHCSSSCCCHHHH
T ss_pred ccCHHHHHHHHHHHHcCCCH-hhh----HHHHHHcCCCHHHHHHHHHHHHcC--CCHHHHHHHHHHHHcCCCCCccHHHH
Confidence 35789999999999998754 333 999999999999999999999998 799999999999999 8999999
Q ss_pred HHHHHHHHhch
Q 014478 408 RETLKDGTNLE 418 (424)
Q Consensus 408 ~~~~~~al~l~ 418 (424)
+..|++|.+..
T Consensus 81 ~~~~~~Aa~~g 91 (138)
T 1klx_A 81 AQYYSKACGLN 91 (138)
T ss_dssp HHHHHHHHHTT
T ss_pred HHHHHHHHcCC
Confidence 99999998764
|
| >2xm6_A Protein corresponding to locus C5321 from CFT073 strain; unknown function, SEL1-like repeats; 1.68A {Escherichia coli} | Back alignment and structure |
|---|
Probab=98.22 E-value=1.4e-05 Score=78.38 Aligned_cols=97 Identities=13% Similarity=-0.028 Sum_probs=82.0
Q ss_pred HHHHHHHHHHhHHHh----hCCHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHh----cCChHHHHHHHHHHHhcCCCch
Q 014478 317 QETLNSKKHGDTAFR----AKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLM----NDMPQEALGDAMQAQVVSPDWP 388 (424)
Q Consensus 317 ~~~~~~~~~g~~~~~----~g~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~----~~~~~~A~~~~~~al~~~p~~~ 388 (424)
..+......|..++. .+++++|++.|.++++. . +..+++++|.+|.. .+++++|+..|++|++. .++
T Consensus 73 ~~~~a~~~Lg~~y~~g~g~~~~~~~A~~~~~~a~~~--~-~~~a~~~Lg~~y~~g~g~~~~~~~A~~~~~~a~~~--~~~ 147 (490)
T 2xm6_A 73 GYTPAEYVLGLRYMNGEGVPQDYAQAVIWYKKAALK--G-LPQAQQNLGVMYHEGNGVKVDKAESVKWFRLAAEQ--GRD 147 (490)
T ss_dssp TCHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHT--T-CHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHT--TCH
T ss_pred CCHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHC--C-CHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHC--CCH
Confidence 345567778888888 88999999999999875 4 77888899999988 78999999999999876 588
Q ss_pred HHHHHHHHHHHh----CCChHHHHHHHHHHHhch
Q 014478 389 TALYLQAACLFS----LGMENDARETLKDGTNLE 418 (424)
Q Consensus 389 ~a~~~~g~~~~~----~~~~~~A~~~~~~al~l~ 418 (424)
.+++++|.+|.. .+++++|++.|+++++.+
T Consensus 148 ~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~a~~~~ 181 (490)
T 2xm6_A 148 SGQQSMGDAYFEGDGVTRDYVMAREWYSKAAEQG 181 (490)
T ss_dssp HHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHCC
Confidence 899999999988 889999999999988764
|
| >1nzn_A CGI-135 protein, fission protein FIS1P; TPR, unknown function; 2.00A {Homo sapiens} SCOP: a.118.8.1 PDB: 1iyg_A | Back alignment and structure |
|---|
Probab=98.21 E-value=5.8e-06 Score=63.92 Aligned_cols=88 Identities=9% Similarity=0.029 Sum_probs=73.0
Q ss_pred CHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHhcCChHH---HHHHHHHHHhcC-C-CchHHHHHHHHHHHhCCChHHHH
Q 014478 334 DFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQE---ALGDAMQAQVVS-P-DWPTALYLQAACLFSLGMENDAR 408 (424)
Q Consensus 334 ~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~---A~~~~~~al~~~-p-~~~~a~~~~g~~~~~~~~~~~A~ 408 (424)
....+.+.|.+++..++. .....++.|.++.+..+... +|..++..+..+ | ..-+.+|.+|.+++++|+|++|+
T Consensus 16 ~l~~~~~~y~~e~~~~~~-s~~~~F~yAw~Lv~S~~~~d~~~GI~lLe~l~~~~~p~~~Rd~lY~LAvg~yklg~Y~~A~ 94 (126)
T 1nzn_A 16 DLLKFEKKFQSEKAAGSV-SKSTQFEYAWCLVRTRYNDDIRKGIVLLEELLPKGSKEEQRDYVFYLAVGNYRLKEYEKAL 94 (126)
T ss_dssp HHHHHHHHHHHHHHHSCC-CHHHHHHHHHHHTTSSSHHHHHHHHHHHHHHTTTSCHHHHHHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHHHHHhccCCC-cHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHhhhHHHHH
Confidence 345667777777776776 88899999999998887665 999999988887 5 67789999999999999999999
Q ss_pred HHHHHHHhchhhcC
Q 014478 409 ETLKDGTNLEAKKN 422 (424)
Q Consensus 409 ~~~~~al~l~~~~~ 422 (424)
.+++..|+++|.+.
T Consensus 95 ~~~~~lL~~eP~n~ 108 (126)
T 1nzn_A 95 KYVRGLLQTEPQNN 108 (126)
T ss_dssp HHHHHHHHHCTTCH
T ss_pred HHHHHHHHhCCCCH
Confidence 99999999999753
|
| >1pc2_A Mitochondria fission protein; unknown function; NMR {Homo sapiens} SCOP: a.118.8.1 | Back alignment and structure |
|---|
Probab=98.18 E-value=3.9e-06 Score=67.38 Aligned_cols=80 Identities=13% Similarity=-0.030 Sum_probs=69.6
Q ss_pred HHHHHHHHhHHHhhC---CHHHHHHHHHHHhcCC-CCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhcCCCchHHHHHH
Q 014478 319 TLNSKKHGDTAFRAK---DFSTAIDCYTQFIDGG-TMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQ 394 (424)
Q Consensus 319 ~~~~~~~g~~~~~~g---~~~~A~~~~~~ai~~~-p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~ 394 (424)
....++.|..+.+.+ +.++++..++..++.+ |....++++++|..|.++++|++|...++++|+++|+|.+|...+
T Consensus 32 ~~~~F~ya~~Lv~S~~~~~~~~gI~lLe~ll~~~~p~~~rd~lY~LAv~~~kl~~Y~~A~~y~~~lL~ieP~n~QA~~Lk 111 (152)
T 1pc2_A 32 KSTQFEYAWCLVRSKYNDDIRKGIVLLEELLPKGSKEEQRDYVFYLAVGNYRLKEYEKALKYVRGLLQTEPQNNQAKELE 111 (152)
T ss_dssp HHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHCTTCHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCCccchHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCCCCHHHHHHH
Confidence 456667888888877 7789999999999998 743789999999999999999999999999999999999998776
Q ss_pred HHHH
Q 014478 395 AACL 398 (424)
Q Consensus 395 g~~~ 398 (424)
-.+-
T Consensus 112 ~~ie 115 (152)
T 1pc2_A 112 RLID 115 (152)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 5543
|
| >3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A* | Back alignment and structure |
|---|
Probab=98.16 E-value=4e-06 Score=78.70 Aligned_cols=45 Identities=0% Similarity=-0.091 Sum_probs=34.7
Q ss_pred hHHHHHHHHHhcCC-C--cCcceeEEEEEeC---CeeeEEEecCCCCCHHh
Q 014478 30 TLNLEEAKAVGNLR-S--ERLANLIGCCYEA---DERLLVAEFMPNETLAK 74 (424)
Q Consensus 30 ~~~~~E~~~l~~l~-h--~~iv~~~~~~~~~---~~~~lv~e~~~~gsL~~ 74 (424)
..+.+|+.+++.|. + -.+++++.++.+. ...++||||++|.++.+
T Consensus 72 ~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~~~~~g~~~~v~e~l~G~~l~~ 122 (357)
T 3ats_A 72 YRLDHQFEVIRLVGELTDVPVPRVRWIETTGDVLGTPFFLMDYVEGVVPPD 122 (357)
T ss_dssp CCHHHHHHHHHHHHHHCCSCCCCEEEEECSSTTTSSCEEEEECCCCBCCCB
T ss_pred hHHHHHHHHHHHHhhcCCCCCCcEEEEccCCCccCCceEEEEecCCCChhh
Confidence 56788999999884 3 4688899988765 34689999999977653
|
| >4b4t_Q 26S proteasome regulatory subunit RPN6; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=98.07 E-value=5.3e-06 Score=79.60 Aligned_cols=101 Identities=9% Similarity=0.023 Sum_probs=81.5
Q ss_pred HHHHHHhHHHhhCCHHHHHHHHHHHhcCCCCCC----------------HHHHHHHHHHHHhcCChHHHHHHHHHHHhcC
Q 014478 321 NSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVS----------------PTVYARRCLSYLMNDMPQEALGDAMQAQVVS 384 (424)
Q Consensus 321 ~~~~~g~~~~~~g~~~~A~~~~~~ai~~~p~~~----------------~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~ 384 (424)
..+++|..+.+.|+|++|++.|.++++.+|... ..++.++|.+|...|++++|++.+.+++...
T Consensus 6 ~~l~~a~~l~~~~~y~eA~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~al~~l~~~y~~~~~~~~a~~~~~~~~~~~ 85 (434)
T 4b4t_Q 6 SKLEEARRLVNEKQYNEAEQVYLSLLDKDSSQSSAAAGASVDDKRRNEQETSILELGQLYVTMGAKDKLREFIPHSTEYM 85 (434)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHSCCCSSSBSSSSSBCSHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHTHHHH
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHhhCcccchhHHHHHHHHHHhhhHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
Confidence 456788889999999999999999999988621 1468899999999999999999999999877
Q ss_pred CCchHH------HHHHHHHHHhCCChHHHHHHHHHHHhchhhc
Q 014478 385 PDWPTA------LYLQAACLFSLGMENDARETLKDGTNLEAKK 421 (424)
Q Consensus 385 p~~~~a------~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~ 421 (424)
+...++ ...+|.++...|++++|+..+++++....+.
T Consensus 86 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~ 128 (434)
T 4b4t_Q 86 MQFAKSKTVKVLKTLIEKFEQVPDSLDDQIFVCEKSIEFAKRE 128 (434)
T ss_dssp HTSCHHHHHHHHHHHHHHHCSCCSCHHHHHHHHHHHHHHHHHS
T ss_pred HHccchHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHh
Confidence 665443 3456777778888888888888888776543
|
| >3mv2_B Coatomer subunit epsilon; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_B | Back alignment and structure |
|---|
Probab=97.98 E-value=3e-05 Score=70.45 Aligned_cols=98 Identities=14% Similarity=0.016 Sum_probs=79.6
Q ss_pred HHHHHHHhHHHhhC--CHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhc----------CCCc
Q 014478 320 LNSKKHGDTAFRAK--DFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVV----------SPDW 387 (424)
Q Consensus 320 ~~~~~~g~~~~~~g--~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~----------~p~~ 387 (424)
...+..|...+..| ++++|...|+++.+..|+ .......++ ++.++|++++|...+++.+++ +|++
T Consensus 177 l~~Laea~v~l~~g~~~~q~A~~~f~El~~~~p~-~~~~~lLln-~~~~~g~~~eAe~~L~~l~~~~p~~~~k~~~~p~~ 254 (310)
T 3mv2_B 177 ILNLAESYIKFATNKETATSNFYYYEELSQTFPT-WKTQLGLLN-LHLQQRNIAEAQGIVELLLSDYYSVEQKENAVLYK 254 (310)
T ss_dssp HHHHHHHHHHHHHTCSTTTHHHHHHHHHHTTSCS-HHHHHHHHH-HHHHHTCHHHHHHHHHHHHSHHHHTTTCHHHHSSH
T ss_pred HHHHHHHHHHHHhCCccHHHHHHHHHHHHHhCCC-cccHHHHHH-HHHHcCCHHHHHHHHHHHHHhcccccccccCCCCC
Confidence 34445565566666 999999999999888875 333222222 899999999999999988877 5999
Q ss_pred hHHHHHHHHHHHhCCChHHHHHHHHHHHhchhhc
Q 014478 388 PTALYLQAACLFSLGMENDARETLKDGTNLEAKK 421 (424)
Q Consensus 388 ~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~ 421 (424)
+.++.|+..+...+|+ +|.+.++++.+++|+.
T Consensus 255 ~~~LaN~i~l~~~lgk--~a~~l~~qL~~~~P~h 286 (310)
T 3mv2_B 255 PTFLANQITLALMQGL--DTEDLTNQLVKLDHEH 286 (310)
T ss_dssp HHHHHHHHHHHHHTTC--TTHHHHHHHHHTTCCC
T ss_pred HHHHHHHHHHHHHhCh--HHHHHHHHHHHhCCCC
Confidence 9999999999999998 9999999999999863
|
| >3e4b_A ALGK; tetratricopeptide repeat, superhelix, alginate biosynt pseudomonas, protein binding; 2.50A {Pseudomonas fluorescens} | Back alignment and structure |
|---|
Probab=97.98 E-value=3.5e-05 Score=74.80 Aligned_cols=80 Identities=11% Similarity=-0.057 Sum_probs=45.9
Q ss_pred hhCCHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHhcC-----ChHHHHHHHHHHHhcCCCchHHHHHHHHHHHh----C
Q 014478 331 RAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMND-----MPQEALGDAMQAQVVSPDWPTALYLQAACLFS----L 401 (424)
Q Consensus 331 ~~g~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~-----~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~----~ 401 (424)
..+++++|++.|++|++. + +..+++++|.+|. .| ++++|+..|++|+ |.++.+++++|.+|.. .
T Consensus 263 ~~~d~~~A~~~~~~Aa~~--g-~~~A~~~Lg~~y~-~G~g~~~d~~~A~~~~~~Aa---~g~~~A~~~Lg~~y~~G~g~~ 335 (452)
T 3e4b_A 263 ELGDVEQMMKYLDNGRAA--D-QPRAELLLGKLYY-EGKWVPADAKAAEAHFEKAV---GREVAADYYLGQIYRRGYLGK 335 (452)
T ss_dssp GGCCHHHHHHHHHHHHHT--T-CHHHHHHHHHHHH-HCSSSCCCHHHHHHHHHTTT---TTCHHHHHHHHHHHHTTTTSS
T ss_pred CCCCHHHHHHHHHHHHHC--C-CHHHHHHHHHHHH-cCCCCCCCHHHHHHHHHHHh---CCCHHHHHHHHHHHHCCCCCC
Confidence 455666666666666543 2 4555666666655 23 5666666666666 5666666666655554 2
Q ss_pred CChHHHHHHHHHHHhc
Q 014478 402 GMENDARETLKDGTNL 417 (424)
Q Consensus 402 ~~~~~A~~~~~~al~l 417 (424)
+++++|+..|++|.+.
T Consensus 336 ~d~~~A~~~~~~Aa~~ 351 (452)
T 3e4b_A 336 VYPQKALDHLLTAARN 351 (452)
T ss_dssp CCHHHHHHHHHHHHTT
T ss_pred cCHHHHHHHHHHHHhh
Confidence 3666666666665543
|
| >1b89_A Protein (clathrin heavy chain); triskelion, coated vesicles, endocytosis, SELF- assembly, alpha-alpha superhelix; 2.60A {Bos taurus} SCOP: a.118.1.3 | Back alignment and structure |
|---|
Probab=97.97 E-value=1.8e-05 Score=75.23 Aligned_cols=91 Identities=16% Similarity=0.110 Sum_probs=55.9
Q ss_pred HHHHHHHhHHHhhCCHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhcCCCchHHHHHHHHHHH
Q 014478 320 LNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAACLF 399 (424)
Q Consensus 320 ~~~~~~g~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~ 399 (424)
..+...|..+++.|+|++|++.|.+| . +...|...+.++...|+++.|...... |..+|++ ...+...|.
T Consensus 149 ~n~~~LA~~L~~Lg~yq~AVea~~KA-----~-~~~~Wk~v~~aCv~~~ef~lA~~~~l~-L~~~ad~---l~~lv~~Ye 218 (449)
T 1b89_A 149 SNFGRLASTLVHLGEYQAAVDGARKA-----N-STRTWKEVCFACVDGKEFRLAQMCGLH-IVVHADE---LEELINYYQ 218 (449)
T ss_dssp TCHHHHHHHHHTTTCHHHHHHHHHHH-----T-CHHHHHHHHHHHHHTTCHHHHHHTTTT-TTTCHHH---HHHHHHHHH
T ss_pred hhHHHHHHHHHHhccHHHHHHHHHHc-----C-CchhHHHHHHHHHHcCcHHHHHHHHHH-HHhCHhh---HHHHHHHHH
Confidence 45556666666666666666666666 2 445555555555555555555444332 3333333 334556788
Q ss_pred hCCChHHHHHHHHHHHhchhh
Q 014478 400 SLGMENDARETLKDGTNLEAK 420 (424)
Q Consensus 400 ~~~~~~~A~~~~~~al~l~~~ 420 (424)
..|++++|+..+++++.+++.
T Consensus 219 k~G~~eEai~lLe~aL~le~a 239 (449)
T 1b89_A 219 DRGYFEELITMLEAALGLERA 239 (449)
T ss_dssp HTTCHHHHHHHHHHHTTSTTC
T ss_pred HCCCHHHHHHHHHHHhCCcHH
Confidence 888888888888888888753
|
| >3mv2_B Coatomer subunit epsilon; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_B | Back alignment and structure |
|---|
Probab=97.97 E-value=4.7e-05 Score=69.11 Aligned_cols=96 Identities=9% Similarity=-0.064 Sum_probs=63.6
Q ss_pred HHHHhHHHhhCCHHHHHHHHHHHhcCCC--CCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhcCCC----chHHHHHHHH
Q 014478 323 KKHGDTAFRAKDFSTAIDCYTQFIDGGT--MVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPD----WPTALYLQAA 396 (424)
Q Consensus 323 ~~~g~~~~~~g~~~~A~~~~~~ai~~~p--~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~----~~~a~~~~g~ 396 (424)
...|..+...|++++|++.+.++|..+| + ..+++...+.+|+++|+.+.|.+.+++..+.+|+ +.....+++.
T Consensus 104 ~~la~i~~~~g~~eeAL~~l~~~i~~~~~~~-~lea~~l~vqi~L~~~r~d~A~k~l~~~~~~~~d~~~~~d~~l~~Lae 182 (310)
T 3mv2_B 104 YLLATAQAILGDLDKSLETCVEGIDNDEAEG-TTELLLLAIEVALLNNNVSTASTIFDNYTNAIEDTVSGDNEMILNLAE 182 (310)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHTSSCSTT-HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHhccCCCcC-cHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCccccccchHHHHHHHH
Confidence 4566777777777777777777777776 5 6677777777777777777777777777777773 2233344433
Q ss_pred H--HHhCC--ChHHHHHHHHHHHhchh
Q 014478 397 C--LFSLG--MENDARETLKDGTNLEA 419 (424)
Q Consensus 397 ~--~~~~~--~~~~A~~~~~~al~l~~ 419 (424)
+ ....| ++++|...|+++.+..|
T Consensus 183 a~v~l~~g~~~~q~A~~~f~El~~~~p 209 (310)
T 3mv2_B 183 SYIKFATNKETATSNFYYYEELSQTFP 209 (310)
T ss_dssp HHHHHHHTCSTTTHHHHHHHHHHTTSC
T ss_pred HHHHHHhCCccHHHHHHHHHHHHHhCC
Confidence 3 44444 77777777777665554
|
| >1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A | Back alignment and structure |
|---|
Probab=97.96 E-value=4.1e-05 Score=81.79 Aligned_cols=91 Identities=12% Similarity=0.044 Sum_probs=71.9
Q ss_pred HHHHHHHHHhHHHhhCCHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhcCCC-----------
Q 014478 318 ETLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPD----------- 386 (424)
Q Consensus 318 ~~~~~~~~g~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~----------- 386 (424)
....+.+.|..+.+.|++++|++.|.+| + +...|.+.+.++.++|+|++|++.+..|++..++
T Consensus 1104 ~p~vWsqLAKAql~~G~~kEAIdsYiKA-----d-D~say~eVa~~~~~lGkyEEAIeyL~mArk~~~e~~Idt~LafaY 1177 (1630)
T 1xi4_A 1104 EPAVWSQLAKAQLQKGMVKEAIDSYIKA-----D-DPSSYMEVVQAANTSGNWEELVKYLQMARKKARESYVETELIFAL 1177 (1630)
T ss_pred CHHHHHHHHHHHHhCCCHHHHHHHHHhc-----C-ChHHHHHHHHHHHHcCCHHHHHHHHHHHHhhcccccccHHHHHHH
Confidence 3456778899999999999999999887 5 7888999999999999999999999887755533
Q ss_pred ----------------chHHHHHHHHHHHhCCChHHHHHHHHHH
Q 014478 387 ----------------WPTALYLQAACLFSLGMENDARETLKDG 414 (424)
Q Consensus 387 ----------------~~~a~~~~g~~~~~~~~~~~A~~~~~~a 414 (424)
+...+++.|..+...|+|++|+..|.+|
T Consensus 1178 AKl~rleele~fI~~~n~ad~~~iGd~le~eg~YeeA~~~Y~kA 1221 (1630)
T 1xi4_A 1178 AKTNRLAELEEFINGPNNAHIQQVGDRCYDEKMYDAAKLLYNNV 1221 (1630)
T ss_pred HhhcCHHHHHHHHhCCCHHHHHHHHHHHHhcCCHHHHHHHHHhh
Confidence 2335566777777777777777777665
|
| >3ffl_A Anaphase-promoting complex subunit 7; tetratricopeptide repeat motif, helis-turn-helix, cell cycle division, mitosis, TPR repeat; 2.50A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.92 E-value=5.2e-05 Score=61.23 Aligned_cols=95 Identities=16% Similarity=0.053 Sum_probs=76.2
Q ss_pred HHHHHHHHhHHHhhCCHHHHHHHHHHHhcCCCC--------CCHHHHHHHHHHHHhcCChHHHHHHHHHHHhcC------
Q 014478 319 TLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTM--------VSPTVYARRCLSYLMNDMPQEALGDAMQAQVVS------ 384 (424)
Q Consensus 319 ~~~~~~~g~~~~~~g~~~~A~~~~~~ai~~~p~--------~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~------ 384 (424)
...+++....++..|.|+.|+-.+..++.+..+ .....+..+|.+++..++|.+|...|++||++.
T Consensus 20 ~~~l~dqik~L~d~~LY~sA~~La~lLlSl~~~~~~~~sp~~~~~~l~~ladalf~~~eyrrA~~~y~qALq~~k~l~k~ 99 (167)
T 3ffl_A 20 HMNVIDHVRDMAAAGLHSNVRLLSSLLLTLSNNNPELFSPPQKYQLLVYHADSLFHDKEYRNAVSKYTMALQQKKALSKT 99 (167)
T ss_dssp -CCHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSTTSSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHCC---
T ss_pred HHHHHHHHHHHHHhhhHHHHHHHHHHHHHhhcCCcccccHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHhcC
Confidence 346777888899999999999999997766432 113478889999999999999999999987441
Q ss_pred -------------------CCchHHHHHHHHHHHhCCChHHHHHHHHH
Q 014478 385 -------------------PDWPTALYLQAACLFSLGMENDARETLKD 413 (424)
Q Consensus 385 -------------------p~~~~a~~~~g~~~~~~~~~~~A~~~~~~ 413 (424)
+.+.+..|..|.+|.++|++++|+..++.
T Consensus 100 ~s~~~~~~~~ss~p~s~~~~~e~Elkykia~C~~~l~~~~~Ai~~Le~ 147 (167)
T 3ffl_A 100 SKVRPSTGNSASTPQSQCLPSEIEVKYKLAECYTVLKQDKDAIAILDG 147 (167)
T ss_dssp -----------------CCCCHHHHHHHHHHHHHHTTCHHHHHHHHHT
T ss_pred CCccccccccCCCcccccccchHHHHHHHHHHHHHHCCHHHHHHHHhc
Confidence 12236889999999999999999998775
|
| >4b4t_Q 26S proteasome regulatory subunit RPN6; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=97.90 E-value=3.3e-05 Score=73.95 Aligned_cols=99 Identities=7% Similarity=-0.006 Sum_probs=84.0
Q ss_pred HHHHHhHHHhhCCHHHHHHHHHHHhcCCCC-----CCHHHHHHHHHHHHhcCChHHHHHHHHHHHhc------CCCchHH
Q 014478 322 SKKHGDTAFRAKDFSTAIDCYTQFIDGGTM-----VSPTVYARRCLSYLMNDMPQEALGDAMQAQVV------SPDWPTA 390 (424)
Q Consensus 322 ~~~~g~~~~~~g~~~~A~~~~~~ai~~~p~-----~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~------~p~~~~a 390 (424)
....|..+...|++++|++.|.+++...+. ....++.++|.+|...|+|++|+..+++++.. .+...++
T Consensus 98 ~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~l~~~~~~~~~~~~~~~~~~~ 177 (434)
T 4b4t_Q 98 KTLIEKFEQVPDSLDDQIFVCEKSIEFAKREKRVFLKHSLSIKLATLHYQKKQYKDSLALINDLLREFKKLDDKPSLVDV 177 (434)
T ss_dssp HHHHHHHCSCCSCHHHHHHHHHHHHHHHHHSSCCSSHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTSSCSTHHHHH
T ss_pred HHHHHHHHhCCCCHHHHHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHccChHHHHHHHHHHHHHHHhcccchhHHHH
Confidence 334567777889999999999999865332 14678999999999999999999999999865 4556789
Q ss_pred HHHHHHHHHhCCChHHHHHHHHHHHhchhh
Q 014478 391 LYLQAACLFSLGMENDARETLKDGTNLEAK 420 (424)
Q Consensus 391 ~~~~g~~~~~~~~~~~A~~~~~~al~l~~~ 420 (424)
+...|.+|..+|+|++|...|++++.+.++
T Consensus 178 ~~~~~~~~~~~~~~~~A~~~~~~al~~~~~ 207 (434)
T 4b4t_Q 178 HLLESKVYHKLRNLAKSKASLTAARTAANS 207 (434)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCcHHHHHHHHHHHHHHhhc
Confidence 999999999999999999999999988764
|
| >3u64_A Protein TP_0956; tetratrico peptide repeat, protein-prote interaction, syphilis, lipoprotein, transport protein; 2.30A {Treponema pallidum subsp} PDB: 4di3_A 4di4_A* | Back alignment and structure |
|---|
Probab=97.75 E-value=0.00016 Score=64.35 Aligned_cols=79 Identities=9% Similarity=-0.050 Sum_probs=64.1
Q ss_pred HHHHh-cCCCCCCHHHHHHHHHHHHh---c--C------ChHHHHHHHHHHHhcCCC--chHHHHHHHHHHHhC-----C
Q 014478 342 YTQFI-DGGTMVSPTVYARRCLSYLM---N--D------MPQEALGDAMQAQVVSPD--WPTALYLQAACLFSL-----G 402 (424)
Q Consensus 342 ~~~ai-~~~p~~~~~~~~~~~~~~~~---~--~------~~~~A~~~~~~al~~~p~--~~~a~~~~g~~~~~~-----~ 402 (424)
+.+++ +.+|+ +.++++-.|..... . + ...+|...+++|+++||+ +..+|..+|..|... |
T Consensus 140 ~~~~l~~~~~~-dve~L~W~ai~~ss~a~~~~gg~~Al~~l~~A~a~lerAleLDP~~~~GsA~~~LG~lY~~vPp~~gG 218 (301)
T 3u64_A 140 LHKVLSRCTRV-DVGTLYWVGTGYVAAFALTPLGSALPDTVHAAVMMLERACDLWPSYQEGAVWNVLTKFYAAAPESFGG 218 (301)
T ss_dssp HHHHHTTCCGG-GHHHHHHHHHHHHHHHTTSCTTSCCHHHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHHHHSCTTTTC
T ss_pred HHHHHHHcCcc-ccHHHHHHHHHHHHHHhcCCCChHHHHhHHHHHHHHHHHHHhCCCcccCHHHHHHHHHHHhCCCccCC
Confidence 34445 44666 88888777776643 2 2 257899999999999999 666999999999996 9
Q ss_pred ChHHHHHHHHHHHhchhhc
Q 014478 403 MENDARETLKDGTNLEAKK 421 (424)
Q Consensus 403 ~~~~A~~~~~~al~l~~~~ 421 (424)
+.+.|.++|++||+++|.+
T Consensus 219 d~ekA~~~ferAL~LnP~~ 237 (301)
T 3u64_A 219 GMEKAHTAFEHLTRYCSAH 237 (301)
T ss_dssp CHHHHHHHHHHHHHHCCTT
T ss_pred CHHHHHHHHHHHHHhCCCC
Confidence 9999999999999999964
|
| >2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=97.73 E-value=0.00017 Score=66.91 Aligned_cols=31 Identities=6% Similarity=0.030 Sum_probs=26.9
Q ss_pred CCCcccccCCCCCeeecCCCCeEEcccccccc
Q 014478 106 KGRALYHDLNAYRILFDKDGNPRLSSFGLMKN 137 (424)
Q Consensus 106 ~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~ 137 (424)
.. ++|+|+++.||+++.++.+.|+||+.+..
T Consensus 222 ~~-l~HgD~~~~Nil~~~~~~~~lIDfe~a~~ 252 (346)
T 2q83_A 222 PN-LCHQDYGTGNTLLGENEQIWVIDLDTVSF 252 (346)
T ss_dssp CC-EECSSCSTTSEEECGGGCEEECCCTTCEE
T ss_pred Cc-eecCCCCcccEEEeCCCcEEEEehhhccc
Confidence 45 99999999999998788899999986543
|
| >2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A* | Back alignment and structure |
|---|
Probab=97.63 E-value=0.00012 Score=69.68 Aligned_cols=67 Identities=13% Similarity=-0.038 Sum_probs=40.4
Q ss_pred CCCcccceeee--ecceecccccCCCc--------hhhhHHHHHHHHHhcCC---CcCcceeEEEEEeCCeeeEEEecCC
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESSD--------LGETLNLEEAKAVGNLR---SERLANLIGCCYEADERLLVAEFMP 68 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~~--------~~~~~~~~E~~~l~~l~---h~~iv~~~~~~~~~~~~~lv~e~~~ 68 (424)
|+++.||++.. .+..+.+|...... ....++..|.++|+.+. ...+++++.+. ....++|||+++
T Consensus 41 G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~d--~~~~~lvmE~l~ 118 (397)
T 2olc_A 41 GNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYSD--TEMAVTVMEDLS 118 (397)
T ss_dssp SSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEEE--TTTTEEEECCCT
T ss_pred CceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEEc--CCccEEEEEeCC
Confidence 55677887744 33455555432211 12456778999998873 23456777653 445689999998
Q ss_pred CC
Q 014478 69 NE 70 (424)
Q Consensus 69 ~g 70 (424)
|.
T Consensus 119 g~ 120 (397)
T 2olc_A 119 HL 120 (397)
T ss_dssp TS
T ss_pred Cc
Confidence 74
|
| >1b89_A Protein (clathrin heavy chain); triskelion, coated vesicles, endocytosis, SELF- assembly, alpha-alpha superhelix; 2.60A {Bos taurus} SCOP: a.118.1.3 | Back alignment and structure |
|---|
Probab=97.60 E-value=0.00013 Score=69.34 Aligned_cols=97 Identities=14% Similarity=-0.024 Sum_probs=81.6
Q ss_pred HHHHHHHHHhHHHhhCCHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhcCCCchHHHHHHHHH
Q 014478 318 ETLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAAC 397 (424)
Q Consensus 318 ~~~~~~~~g~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~ 397 (424)
....++..+..+...|+|+.|..+... |...|+ . ...+..+|.+.|++++|+..+++++.+++.+...+..+|.+
T Consensus 176 ~~~~Wk~v~~aCv~~~ef~lA~~~~l~-L~~~ad-~---l~~lv~~Yek~G~~eEai~lLe~aL~le~ah~~~ftel~il 250 (449)
T 1b89_A 176 STRTWKEVCFACVDGKEFRLAQMCGLH-IVVHAD-E---LEELINYYQDRGYFEELITMLEAALGLERAHMGMFTELAIL 250 (449)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHTTTT-TTTCHH-H---HHHHHHHHHHTTCHHHHHHHHHHHTTSTTCCHHHHHHHHHH
T ss_pred CchhHHHHHHHHHHcCcHHHHHHHHHH-HHhCHh-h---HHHHHHHHHHCCCHHHHHHHHHHHhCCcHHHHHHHHHHHHH
Confidence 344667778889999999999888875 446665 3 33577899999999999999999999999999999999998
Q ss_pred H--HhCCChHHHHHHHHHHHhchh
Q 014478 398 L--FSLGMENDARETLKDGTNLEA 419 (424)
Q Consensus 398 ~--~~~~~~~~A~~~~~~al~l~~ 419 (424)
| ++.++..++++.|...+.+.+
T Consensus 251 ~~ky~p~k~~ehl~~~~~~ini~k 274 (449)
T 1b89_A 251 YSKFKPQKMREHLELFWSRVNIPK 274 (449)
T ss_dssp HHTTCHHHHHHHHHHHSTTSCHHH
T ss_pred HHhcCHHHHHHHHHHHHHHhcCcH
Confidence 8 556799999999998887776
|
| >3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT} | Back alignment and structure |
|---|
Probab=97.54 E-value=0.00028 Score=64.56 Aligned_cols=68 Identities=15% Similarity=0.011 Sum_probs=47.6
Q ss_pred CCcccceeeeecceecccccCCCchhhhHHHHHHHHHhcCC---CcCcceeEEEEEeCCeeeEEEecCCCCCH
Q 014478 3 GRCSKFSICWFHCHLKSSVLESSDLGETLNLEEAKAVGNLR---SERLANLIGCCYEADERLLVAEFMPNETL 72 (424)
Q Consensus 3 ~~g~v~~~~~~~~~v~~~~~~~~~~~~~~~~~E~~~l~~l~---h~~iv~~~~~~~~~~~~~lv~e~~~~gsL 72 (424)
.+..+|.....+..+.+|+.... ....+..|+..|+.|. ...+++++.++...+..++||||++|.++
T Consensus 48 ~~n~~y~v~~~~~~~vlK~~~~~--~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~g~~~lvme~l~G~~~ 118 (312)
T 3jr1_A 48 EMNEIWLINDEVQTVFVKINERS--YRSMFRAEADQLALLAKTNSINVPLVYGIGNSQGHSFLLLEALNKSKN 118 (312)
T ss_dssp SSSEEEEEESSSCEEEEEEEEGG--GHHHHHHHHHHHHHHHHTTSSBCCCEEEEEECSSEEEEEEECCCCCCC
T ss_pred cceeeeEEEECCCeEEEEeCCcc--cHHHHHHHHHHHHHHHhhCCCCcceEEEEeecCCceEEEEEeccCCCC
Confidence 33455555443444444443322 3567889999999883 36799999999888889999999999765
|
| >3o48_A Mitochondria fission 1 protein; tetratricopeptide repeat fold, TPR, scaffold, peroxisome, membrane fission, protein binding; 1.75A {Saccharomyces cerevisiae} PDB: 2pqr_A 2pqn_A 3uux_A | Back alignment and structure |
|---|
Probab=97.52 E-value=0.00044 Score=53.51 Aligned_cols=76 Identities=5% Similarity=-0.160 Sum_probs=41.2
Q ss_pred HHHHHHhHHHhhCC---HHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhcCCCchHHHHHHHH
Q 014478 321 NSKKHGDTAFRAKD---FSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAA 396 (424)
Q Consensus 321 ~~~~~g~~~~~~g~---~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~ 396 (424)
..++.|..+.+..+ ..++|..++..++.+|...-+.++.+|..+.++|+|++|...++..|+..|+|.+|...+..
T Consensus 42 t~F~yAw~Lv~S~~~~d~~~GI~LLe~l~~~~~~~~Rd~LYyLAvg~yklgdY~~Ar~y~d~lL~~eP~N~QA~~Lk~~ 120 (134)
T 3o48_A 42 SRFNYAWGLIKSTDVNDERLGVKILTDIYKEAESRRRECLYYLTIGCYKLGEYSMAKRYVDTLFEHERNNKQVGALKSM 120 (134)
T ss_dssp HHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHTCHHHHHHHHHHHHTTCTTCHHHHHHHHH
T ss_pred hHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhCCCCHHHHHHHHH
Confidence 33444444444332 33456666666655553245555666666666666666666666666666666665544433
|
| >1y8m_A FIS1; mitochondria, unknown function; NMR {Saccharomyces cerevisiae} SCOP: a.118.8.1 | Back alignment and structure |
|---|
Probab=97.48 E-value=0.001 Score=52.15 Aligned_cols=69 Identities=9% Similarity=-0.012 Sum_probs=36.7
Q ss_pred CHHHHHHHHHHHHhcCC---hHHHHHHHHHHHhcCC-CchHHHHHHHHHHHhCCChHHHHHHHHHHHhchhhc
Q 014478 353 SPTVYARRCLSYLMNDM---PQEALGDAMQAQVVSP-DWPTALYLQAACLFSLGMENDARETLKDGTNLEAKK 421 (424)
Q Consensus 353 ~~~~~~~~~~~~~~~~~---~~~A~~~~~~al~~~p-~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~ 421 (424)
.....++.|.++.+..+ ..+++..++..+...| +.-+.+|.+|.+++++|+|++|+.+.+..|+++|.+
T Consensus 38 s~~t~F~YAw~Lv~S~~~~di~~GI~LLe~l~~~~~~~~RdcLYyLAvg~ykl~~Y~~Ar~y~d~lL~~eP~n 110 (144)
T 1y8m_A 38 TIQSRFNYAWGLIKSTDVNDERLGVKILTDIYKEAESRRRECLYYLTIGCYKLGEYSMAKRYVDTLFEHERNN 110 (144)
T ss_dssp CHHHHHHHHHHHHHSSSHHHHHHHHHHHHHHHHHCCSTHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHTCCCC
T ss_pred cHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCccchhHHHHHHHHHHHHhhhHHHHHHHHHHHHhcCCCc
Confidence 45555555555555443 2345555555555555 344455555555555555555555555555555543
|
| >3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A* | Back alignment and structure |
|---|
Probab=97.44 E-value=0.00015 Score=69.70 Aligned_cols=84 Identities=12% Similarity=0.001 Sum_probs=65.6
Q ss_pred HHHHHHHHHhHHHhhCCHHHHHHHHHHHhcC-----CCC--CCHHHHHHHHHHHHhcCChHHHHHHHHHHHhc-----CC
Q 014478 318 ETLNSKKHGDTAFRAKDFSTAIDCYTQFIDG-----GTM--VSPTVYARRCLSYLMNDMPQEALGDAMQAQVV-----SP 385 (424)
Q Consensus 318 ~~~~~~~~g~~~~~~g~~~~A~~~~~~ai~~-----~p~--~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~-----~p 385 (424)
.+..+...|..+..+|+|++|+..|.++++. .|+ +-...++|+|.+|..+|++++|+..+++|+++ .|
T Consensus 328 ~~~~~~~L~~~y~~~g~~~eA~~~~~~~L~i~~~~lg~~Hp~~a~~l~nLa~~~~~~g~~~eA~~~~~~Al~i~~~~lG~ 407 (429)
T 3qwp_A 328 QLKVLDCAMDACINLGLLEEALFYGTRTMEPYRIFFPGSHPVRGVQVMKVGKLQLHQGMFPQAMKNLRLAFDIMRVTHGR 407 (429)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHSCSSCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCT
T ss_pred HHHHHHHHHHHHHhhccHHHHHHHHHHHHHhHHHHcCCCChHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCC
Confidence 3456667888999999999999999999964 222 14577999999999999999999999999965 56
Q ss_pred CchH---HHHHHHHHHHhC
Q 014478 386 DWPT---ALYLQAACLFSL 401 (424)
Q Consensus 386 ~~~~---a~~~~g~~~~~~ 401 (424)
+++. .+.+++.+...+
T Consensus 408 ~Hp~~~~~~~~l~~~~~e~ 426 (429)
T 3qwp_A 408 EHSLIEDLILLLEECDANI 426 (429)
T ss_dssp TSHHHHHHHHHHHHHHHHH
T ss_pred CChHHHHHHHHHHHHHHHH
Confidence 6654 455666666543
|
| >1nzn_A CGI-135 protein, fission protein FIS1P; TPR, unknown function; 2.00A {Homo sapiens} SCOP: a.118.8.1 PDB: 1iyg_A | Back alignment and structure |
|---|
Probab=97.43 E-value=0.00062 Score=52.51 Aligned_cols=79 Identities=10% Similarity=-0.082 Sum_probs=65.8
Q ss_pred HHHHHHHhHHHhhCCHHH---HHHHHHHHhcCC-CCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhcCCCchHHHHHHH
Q 014478 320 LNSKKHGDTAFRAKDFST---AIDCYTQFIDGG-TMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQA 395 (424)
Q Consensus 320 ~~~~~~g~~~~~~g~~~~---A~~~~~~ai~~~-p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g 395 (424)
...+..|..+.+..+..+ +|..++..++.+ |...-+..+.+|..+.++|+|++|...++..|+.+|+|.+|...+.
T Consensus 36 ~~~F~yAw~Lv~S~~~~d~~~GI~lLe~l~~~~~p~~~Rd~lY~LAvg~yklg~Y~~A~~~~~~lL~~eP~n~QA~~Lk~ 115 (126)
T 1nzn_A 36 STQFEYAWCLVRTRYNDDIRKGIVLLEELLPKGSKEEQRDYVFYLAVGNYRLKEYEKALKYVRGLLQTEPQNNQAKELER 115 (126)
T ss_dssp HHHHHHHHHHTTSSSHHHHHHHHHHHHHHTTTSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhCCCCHHHHHHHH
Confidence 345566777777776655 999999999987 6337789999999999999999999999999999999999987665
Q ss_pred HHH
Q 014478 396 ACL 398 (424)
Q Consensus 396 ~~~ 398 (424)
.+-
T Consensus 116 ~i~ 118 (126)
T 1nzn_A 116 LID 118 (126)
T ss_dssp HHH
T ss_pred HHH
Confidence 543
|
| >3ly7_A Transcriptional activator CADC; alpha/beta domain, alpha domain, DNA-binding, transcription regulation, transmembrane; 1.80A {Escherichia coli} PDB: 3lya_A 3ly8_A 3ly9_A | Back alignment and structure |
|---|
Probab=97.40 E-value=0.00031 Score=65.00 Aligned_cols=71 Identities=17% Similarity=0.062 Sum_probs=61.1
Q ss_pred HHHHHHHhHHHhhCCHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhcCCCchHHHH
Q 014478 320 LNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALY 392 (424)
Q Consensus 320 ~~~~~~g~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~ 392 (424)
..+...|..++..|++++|+..+++|+.++|. ..+|..+|.++...|++++|++.|++|+.++|....-++
T Consensus 278 ~~~~alal~~l~~gd~d~A~~~l~rAl~Ln~s--~~a~~llG~~~~~~G~~~eA~e~~~~AlrL~P~~~t~~~ 348 (372)
T 3ly7_A 278 IIYQIKAVSALVKGKTDESYQAINTGIDLEMS--WLNYVLLGKVYEMKGMNREAADAYLTAFNLRPGANTLYW 348 (372)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHHCCC--HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSCSHHHHHH
T ss_pred HHHHHHHHHHHhCCCHHHHHHHHHHHHhcCCC--HHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCcChHHH
Confidence 34445666677789999999999999999974 778899999999999999999999999999999875433
|
| >3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A* | Back alignment and structure |
|---|
Probab=97.37 E-value=0.00022 Score=68.41 Aligned_cols=74 Identities=9% Similarity=0.034 Sum_probs=61.0
Q ss_pred HHHHHHHHHHhHHHhhCCHHHHHHHHHHHhcC-----CCC--CCHHHHHHHHHHHHhcCChHHHHHHHHHHHhc-----C
Q 014478 317 QETLNSKKHGDTAFRAKDFSTAIDCYTQFIDG-----GTM--VSPTVYARRCLSYLMNDMPQEALGDAMQAQVV-----S 384 (424)
Q Consensus 317 ~~~~~~~~~g~~~~~~g~~~~A~~~~~~ai~~-----~p~--~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~-----~ 384 (424)
..+..+...|..|..+|+|++|+..|+++++. .|+ +-...++|+|.+|..+|++++|+..|++|+++ .
T Consensus 338 ~~a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~~lG~~Hp~~a~~l~nLa~~~~~qg~~~eA~~~~~~Al~i~~~~lG 417 (433)
T 3qww_A 338 YMLHMMYQAMGVCLYMQDWEGALKYGQKIIKPYSKHYPVYSLNVASMWLKLGRLYMGLENKAAGEKALKKAIAIMEVAHG 417 (433)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCSSCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHcC
Confidence 34556678899999999999999999999964 232 14578999999999999999999999999965 5
Q ss_pred CCchHH
Q 014478 385 PDWPTA 390 (424)
Q Consensus 385 p~~~~a 390 (424)
|+++..
T Consensus 418 ~~Hp~~ 423 (433)
T 3qww_A 418 KDHPYI 423 (433)
T ss_dssp TTCHHH
T ss_pred CCChHH
Confidence 676653
|
| >2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=97.29 E-value=0.00089 Score=64.11 Aligned_cols=31 Identities=10% Similarity=0.146 Sum_probs=26.6
Q ss_pred hCCCcccccCCCCCeeecCCCCeEEcccccccc
Q 014478 105 SKGRALYHDLNAYRILFDKDGNPRLSSFGLMKN 137 (424)
Q Consensus 105 ~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~ 137 (424)
... ++|+|++|.|||++.++ ++++||+.+..
T Consensus 231 ~~~-liHGDl~~~Nil~~~~~-~~lID~e~a~~ 261 (420)
T 2pyw_A 231 AQA-LIHGDLHTGSVMVTQDS-TQVIDPEFSFY 261 (420)
T ss_dssp CCE-EECSCCSGGGEEECSSC-EEECCCTTCEE
T ss_pred CCe-EEecCCCCCcEEEeCCC-CEEEeCccccc
Confidence 455 99999999999998776 99999987664
|
| >2ff4_A Probable regulatory protein EMBR; winged-helix, tetratricopeptide repeat, beta-sandwich, trans; HET: DNA TPO; 1.90A {Mycobacterium tuberculosis} SCOP: a.4.6.1 a.118.8.3 b.26.1.2 PDB: 2fez_A* | Back alignment and structure |
|---|
Probab=97.22 E-value=0.0055 Score=57.86 Aligned_cols=99 Identities=9% Similarity=-0.012 Sum_probs=81.7
Q ss_pred HHHHHHHHHhHHHhhCCHHHHHHHHHHHhcCCCCC-------C--------------HHHHHHHHHHHHhcCChHHHHHH
Q 014478 318 ETLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMV-------S--------------PTVYARRCLSYLMNDMPQEALGD 376 (424)
Q Consensus 318 ~~~~~~~~g~~~~~~g~~~~A~~~~~~ai~~~p~~-------~--------------~~~~~~~~~~~~~~~~~~~A~~~ 376 (424)
....+...|......|+.++|++.+.+|+.+...+ . ..+...++.++...|++++|+..
T Consensus 114 ~f~~l~~~~~~~~~~~~~~~a~~~l~~Al~L~rG~~L~~~~~~~w~~~~r~~l~~~~~~a~~~~~~~~l~~g~~~~a~~~ 193 (388)
T 2ff4_A 114 RFVAEKTAGVHAAAAGRFEQASRHLSAALREWRGPVLDDLRDFQFVEPFATALVEDKVLAHTAKAEAEIACGRASAVIAE 193 (388)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCCSSTTGGGTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCHHHHHHHHHHHHHhcCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
Confidence 34455666777778899999999999999885431 0 12344566778899999999999
Q ss_pred HHHHHhcCCCchHHHHHHHHHHHhCCChHHHHHHHHHHHh
Q 014478 377 AMQAQVVSPDWPTALYLQAACLFSLGMENDARETLKDGTN 416 (424)
Q Consensus 377 ~~~al~~~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~ 416 (424)
+.+++..+|-+-.+|..+-.+|+..|+..+|++.|+++-+
T Consensus 194 l~~~~~~~P~~E~~~~~lm~al~~~Gr~~~Al~~y~~~r~ 233 (388)
T 2ff4_A 194 LEALTFEHPYREPLWTQLITAYYLSDRQSDALGAYRRVKT 233 (388)
T ss_dssp HHHHHHHSTTCHHHHHHHHHHHHTTTCHHHHHHHHHHHHH
T ss_pred HHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999998654
|
| >3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti} | Back alignment and structure |
|---|
Probab=97.21 E-value=0.00067 Score=61.80 Aligned_cols=28 Identities=14% Similarity=0.011 Sum_probs=23.7
Q ss_pred cccccCCCCCeeecCCCCeEEcccccccc
Q 014478 109 ALYHDLNAYRILFDKDGNPRLSSFGLMKN 137 (424)
Q Consensus 109 ivH~dikp~Nill~~~~~~kl~Dfg~~~~ 137 (424)
++|+|+.+.||+ ..++.+.++||..+..
T Consensus 175 l~HgDl~~~Nil-~~~~~~~lID~e~a~~ 202 (301)
T 3dxq_A 175 ACHCDPLCENFL-DTGERMWIVDWEYSGM 202 (301)
T ss_dssp EECSCCCGGGEE-ECSSCEEECCCTTCEE
T ss_pred eeccCCCcCCEE-ECCCCEEEEecccccC
Confidence 799999999999 5567789999986553
|
| >1y8m_A FIS1; mitochondria, unknown function; NMR {Saccharomyces cerevisiae} SCOP: a.118.8.1 | Back alignment and structure |
|---|
Probab=97.08 E-value=0.0052 Score=48.20 Aligned_cols=78 Identities=5% Similarity=-0.168 Sum_probs=63.7
Q ss_pred HHHHHHhHHHhhC---CHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhcCCCchHHHHHHHHH
Q 014478 321 NSKKHGDTAFRAK---DFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAAC 397 (424)
Q Consensus 321 ~~~~~g~~~~~~g---~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~ 397 (424)
..++.|..+.+.. +-.+++..++..++..|...-+..+.+|..+.++|+|++|...++..|+.+|+|.+|...+..+
T Consensus 41 t~F~YAw~Lv~S~~~~di~~GI~LLe~l~~~~~~~~RdcLYyLAvg~ykl~~Y~~Ar~y~d~lL~~eP~n~QA~~Lk~~I 120 (144)
T 1y8m_A 41 SRFNYAWGLIKSTDVNDERLGVKILTDIYKEAESRRRECLYYLTIGCYKLGEYSMAKRYVDTLFEHERNNKQVGALKSMV 120 (144)
T ss_dssp HHHHHHHHHHHSSSHHHHHHHHHHHHHHHHHCCSTHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHTCCCCHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCccchhHHHHHHHHHHHHhhhHHHHHHHHHHHHhcCCCcHHHHHHHHHH
Confidence 3344555555554 3457999999999988865779999999999999999999999999999999999987766554
Q ss_pred H
Q 014478 398 L 398 (424)
Q Consensus 398 ~ 398 (424)
-
T Consensus 121 e 121 (144)
T 1y8m_A 121 E 121 (144)
T ss_dssp H
T ss_pred H
Confidence 3
|
| >3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP} | Back alignment and structure |
|---|
Probab=97.07 E-value=0.00082 Score=62.13 Aligned_cols=31 Identities=16% Similarity=0.177 Sum_probs=26.4
Q ss_pred cccccCCCCCeeecCC----CCeEEccccccccCC
Q 014478 109 ALYHDLNAYRILFDKD----GNPRLSSFGLMKNSR 139 (424)
Q Consensus 109 ivH~dikp~Nill~~~----~~~kl~Dfg~~~~~~ 139 (424)
++|||+.+.||+++.+ +.+.|+||+.+....
T Consensus 185 lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~G~ 219 (333)
T 3csv_A 185 FVHRDFHAQNLLWLPEREGLARVGVIDFQDAKLGH 219 (333)
T ss_dssp EECSCCSGGGEEECTTSCGGGGEEECCCTTCEEEC
T ss_pred eEeCCcCcccEEeccCcCCCCCeEEEeCCCcCcCC
Confidence 9999999999999874 678999999776543
|
| >3o48_A Mitochondria fission 1 protein; tetratricopeptide repeat fold, TPR, scaffold, peroxisome, membrane fission, protein binding; 1.75A {Saccharomyces cerevisiae} PDB: 2pqr_A 2pqn_A 3uux_A | Back alignment and structure |
|---|
Probab=97.03 E-value=0.003 Score=48.85 Aligned_cols=85 Identities=8% Similarity=-0.040 Sum_probs=69.6
Q ss_pred HHHHHHHHHHhcCCCCCCHHHHHHHHHHHHhcCC---hHHHHHHHHHHHhcCC-CchHHHHHHHHHHHhCCChHHHHHHH
Q 014478 336 STAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDM---PQEALGDAMQAQVVSP-DWPTALYLQAACLFSLGMENDARETL 411 (424)
Q Consensus 336 ~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~---~~~A~~~~~~al~~~p-~~~~a~~~~g~~~~~~~~~~~A~~~~ 411 (424)
....+.|.+-+ .+.......++.|.++.+..+ ..++|..++..+..+| ..-+.+|.+|.+++++|+|++|+.+.
T Consensus 24 ~~l~~qy~~E~--~~~vs~qt~F~yAw~Lv~S~~~~d~~~GI~LLe~l~~~~~~~~Rd~LYyLAvg~yklgdY~~Ar~y~ 101 (134)
T 3o48_A 24 EILRQQVVSEG--GPTATIQSRFNYAWGLIKSTDVNDERLGVKILTDIYKEAESRRRECLYYLTIGCYKLGEYSMAKRYV 101 (134)
T ss_dssp HHHHHHHHHTT--GGGSCHHHHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHTCHHHHHHHH
T ss_pred HHHHHHHHHHh--CCCCChhhHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHHHhhhHHHHHHHH
Confidence 34445555433 233368889999999998776 4579999999999998 45789999999999999999999999
Q ss_pred HHHHhchhhcC
Q 014478 412 KDGTNLEAKKN 422 (424)
Q Consensus 412 ~~al~l~~~~~ 422 (424)
+..|+++|.+.
T Consensus 102 d~lL~~eP~N~ 112 (134)
T 3o48_A 102 DTLFEHERNNK 112 (134)
T ss_dssp HHHHTTCTTCH
T ss_pred HHHHhhCCCCH
Confidence 99999999864
|
| >4e6h_A MRNA 3'-END-processing protein RNA14; HAT domain, heat repeat, CLP1, PCF11, structural protein; 2.30A {Kluyveromyces lactis} PDB: 4e85_A 4eba_A | Back alignment and structure |
|---|
Probab=96.79 E-value=0.004 Score=63.17 Aligned_cols=82 Identities=7% Similarity=-0.053 Sum_probs=76.7
Q ss_pred HHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHhcCChHHHH-HHHHHHHhcCCCchHHHHHHHHHHHhCCChHHHHHHHHH
Q 014478 335 FSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEAL-GDAMQAQVVSPDWPTALYLQAACLFSLGMENDARETLKD 413 (424)
Q Consensus 335 ~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~-~~~~~al~~~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~ 413 (424)
.+.....|++||...|. ++..|...+..+...|+.++|. ..|++|+...|.+...|+..+......|++++|.+.|++
T Consensus 325 ~~Rv~~~Ye~aL~~~p~-~~~lW~~ya~~~~~~~~~~~a~r~il~rAi~~~P~s~~Lwl~~a~~ee~~~~~e~aR~iyek 403 (679)
T 4e6h_A 325 KARMTYVYMQAAQHVCF-APEIWFNMANYQGEKNTDSTVITKYLKLGQQCIPNSAVLAFSLSEQYELNTKIPEIETTILS 403 (679)
T ss_dssp HHHHHHHHHHHHHHTTT-CHHHHHHHHHHHHHHSCCTTHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCC-CHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhCCHHHHHHHHHH
Confidence 34567899999999999 9999999999999999999997 999999999999999999999999999999999999999
Q ss_pred HHhc
Q 014478 414 GTNL 417 (424)
Q Consensus 414 al~l 417 (424)
+++.
T Consensus 404 ~l~~ 407 (679)
T 4e6h_A 404 CIDR 407 (679)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 9975
|
| >3ffl_A Anaphase-promoting complex subunit 7; tetratricopeptide repeat motif, helis-turn-helix, cell cycle division, mitosis, TPR repeat; 2.50A {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.78 E-value=0.0064 Score=49.07 Aligned_cols=82 Identities=17% Similarity=0.112 Sum_probs=61.8
Q ss_pred HHHHHHHHHHHhHHHhhCCHHHHHHHHHHHhcC---CCC---------------------CCHHHHHHHHHHHHhcCChH
Q 014478 316 MQETLNSKKHGDTAFRAKDFSTAIDCYTQFIDG---GTM---------------------VSPTVYARRCLSYLMNDMPQ 371 (424)
Q Consensus 316 ~~~~~~~~~~g~~~~~~g~~~~A~~~~~~ai~~---~p~---------------------~~~~~~~~~~~~~~~~~~~~ 371 (424)
...+..+...|+.+|..|+|..|+..|++||+. -+. .+.+..+..|.||.++++++
T Consensus 60 ~~~~~~l~~ladalf~~~eyrrA~~~y~qALq~~k~l~k~~s~~~~~~~~ss~p~s~~~~~e~Elkykia~C~~~l~~~~ 139 (167)
T 3ffl_A 60 PQKYQLLVYHADSLFHDKEYRNAVSKYTMALQQKKALSKTSKVRPSTGNSASTPQSQCLPSEIEVKYKLAECYTVLKQDK 139 (167)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHCC--------------------CCCCHHHHHHHHHHHHHHTTCHH
T ss_pred HHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHhcCCCccccccccCCCcccccccchHHHHHHHHHHHHHHCCHH
Confidence 345667888999999999999999999998743 111 02368899999999999999
Q ss_pred HHHHHHHHHHhcCCCchHHHHHHHHHH
Q 014478 372 EALGDAMQAQVVSPDWPTALYLQAACL 398 (424)
Q Consensus 372 ~A~~~~~~al~~~p~~~~a~~~~g~~~ 398 (424)
+|+..++..- ..-..++....+|..|
T Consensus 140 ~Ai~~Le~Ip-~k~Rt~kvnm~LakLy 165 (167)
T 3ffl_A 140 DAIAILDGIP-SRQRTPKINMLLANLY 165 (167)
T ss_dssp HHHHHHHTSC-GGGCCHHHHHHHHHHC
T ss_pred HHHHHHhcCC-chhcCHHHHHHHHHHh
Confidence 9999976532 2225566666667665
|
| >3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A* | Back alignment and structure |
|---|
Probab=96.65 E-value=0.0024 Score=60.04 Aligned_cols=105 Identities=16% Similarity=0.132 Sum_probs=65.1
Q ss_pred hhhHHHHHHHHHhcCC-CcCcceeEEEEEeCCeeeEEEecCCCCCHHhH--------------h---ccCC---CCCC--
Q 014478 28 GETLNLEEAKAVGNLR-SERLANLIGCCYEADERLLVAEFMPNETLAKH--------------L---FHWE---TQPM-- 84 (424)
Q Consensus 28 ~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~--------------l---~~~~---~~~l-- 84 (424)
......+|.++++.|. +.-.+++++.+.+ .+||||++|.+|..- + +... +.+.
T Consensus 96 ~~~~~~rE~~vl~~L~~~gv~P~ll~~~~~----g~v~e~i~G~~l~~~~l~~p~~~~~ia~~La~LH~~~~~~~~~~~~ 171 (379)
T 3feg_A 96 GVDSLVLESVMFAILAERSLGPQLYGVFPE----GRLEQYIPSRPLKTQELREPVLSAAIATKMAQFHGMEMPFTKEPHW 171 (379)
T ss_dssp CHHHHHHHHHHHHHHHHTTSSCCEEEEETT----EEEEECCSEEECCGGGGGCHHHHHHHHHHHHHHHTCCCSSCCSCCH
T ss_pred hHHHHHHHHHHHHHHHhcCCCCeEEEEcCC----ccEEEEecCccCChhHhCCHHHHHHHHHHHHHHhCCCCCCCCCccc
Confidence 3455668999998883 3334677777653 389999998665321 0 1100 1112
Q ss_pred CHHHHHHHHHHHHH-------------------HHHHHH----hCC-C--cccccCCCCCeeecCC----CCeEEccccc
Q 014478 85 KWAMRLRVALYLAQ-------------------ALEYCS----SKG-R--ALYHDLNAYRILFDKD----GNPRLSSFGL 134 (424)
Q Consensus 85 ~~~~~~~i~~qi~~-------------------~L~~lH----~~~-~--ivH~dikp~Nill~~~----~~~kl~Dfg~ 134 (424)
-+.++.++..++.. .+..|. ..+ + ++|+|+.+.||+++.+ +.+.++||..
T Consensus 172 l~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~~L~~~~~~~~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~ 251 (379)
T 3feg_A 172 LFGTMERYLKQIQDLPPTGLPEMNLLEMYSLKDEMGNLRKLLESTPSPVVFCHNDIQEGNILLLSEPENADSLMLVDFEY 251 (379)
T ss_dssp HHHHHHHHHHHHHHCCCCSCCSCCHHHHTTHHHHHHHHHHHHHTSCCCEEEECSCCCGGGEEEESCC---CCEEECCCTT
T ss_pred HHHHHHHHHHHHHhccCcccchhhhhhhHHHHHHHHHHHHHHhhcCCCcEEEcCCCCCCeEEEcCCCCccCcEEEEeccc
Confidence 24556666655422 123332 221 1 8999999999999876 6899999976
Q ss_pred cc
Q 014478 135 MK 136 (424)
Q Consensus 135 ~~ 136 (424)
+.
T Consensus 252 a~ 253 (379)
T 3feg_A 252 SS 253 (379)
T ss_dssp CE
T ss_pred CC
Confidence 54
|
| >4e6h_A MRNA 3'-END-processing protein RNA14; HAT domain, heat repeat, CLP1, PCF11, structural protein; 2.30A {Kluyveromyces lactis} PDB: 4e85_A 4eba_A | Back alignment and structure |
|---|
Probab=96.61 E-value=0.01 Score=60.19 Aligned_cols=98 Identities=7% Similarity=-0.048 Sum_probs=69.1
Q ss_pred HHHHHHhHHHhhCCHHHHHHHHHHHhcC-CCCCCHHHHHHHHHHHHhcC-ChHHHHHHHHHHHhcCCCchHHHHHHHHHH
Q 014478 321 NSKKHGDTAFRAKDFSTAIDCYTQFIDG-GTMVSPTVYARRCLSYLMND-MPQEALGDAMQAQVVSPDWPTALYLQAACL 398 (424)
Q Consensus 321 ~~~~~g~~~~~~g~~~~A~~~~~~ai~~-~p~~~~~~~~~~~~~~~~~~-~~~~A~~~~~~al~~~p~~~~a~~~~g~~~ 398 (424)
.+...++...+.|+.+.|.+.|.+|++. .+. ...+|...|..-...+ +++.|...|+++++..|+++..|...+...
T Consensus 436 vWi~y~~~erR~~~l~~AR~vf~~A~~~~~~~-~~~lyi~~A~lE~~~~~d~e~Ar~ife~~Lk~~p~~~~~w~~y~~fe 514 (679)
T 4e6h_A 436 VYCVYMNTMKRIQGLAASRKIFGKCRRLKKLV-TPDIYLENAYIEYHISKDTKTACKVLELGLKYFATDGEYINKYLDFL 514 (679)
T ss_dssp HHHHHHHHHHHHHCHHHHHHHHHHHHHTGGGS-CTHHHHHHHHHHHTTTSCCHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhcCCC-ChHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHCCCchHHHHHHHHHH
Confidence 3444555555667778888888888876 333 4556665555555544 478888888888888888877777777777
Q ss_pred HhCCChHHHHHHHHHHHhchh
Q 014478 399 FSLGMENDARETLKDGTNLEA 419 (424)
Q Consensus 399 ~~~~~~~~A~~~~~~al~l~~ 419 (424)
...|+.+.|...|++|++..|
T Consensus 515 ~~~~~~~~AR~lferal~~~~ 535 (679)
T 4e6h_A 515 IYVNEESQVKSLFESSIDKIS 535 (679)
T ss_dssp HHHTCHHHHHHHHHHHTTTSS
T ss_pred HhCCCHHHHHHHHHHHHHhcC
Confidence 777888888888888887665
|
| >3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A* | Back alignment and structure |
|---|
Probab=96.52 E-value=0.0052 Score=57.61 Aligned_cols=27 Identities=22% Similarity=0.191 Sum_probs=22.7
Q ss_pred cccccCCCCCeeecCCCCeEEccccccc
Q 014478 109 ALYHDLNAYRILFDKDGNPRLSSFGLMK 136 (424)
Q Consensus 109 ivH~dikp~Nill~~~~~~kl~Dfg~~~ 136 (424)
++|+|+.+.|||++.++ +.|+||..+.
T Consensus 214 l~HgDl~~~Nil~~~~~-~~lID~e~a~ 240 (369)
T 3c5i_A 214 FCHNDLQENNIINTNKC-LRLIDFEYSG 240 (369)
T ss_dssp EECSCCCGGGEEECC-C-EEECCCTTCE
T ss_pred EEeCCCCcccEEecCCc-EEEEEecCCC
Confidence 89999999999998654 8999997654
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 424 | ||||
| d1k2pa_ | 258 | d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Hum | 8e-33 | |
| d1sm2a_ | 263 | d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Hu | 1e-32 | |
| d1opja_ | 287 | d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mou | 5e-32 | |
| d1byga_ | 262 | d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) | 5e-32 | |
| d1uwha_ | 276 | d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) | 1e-30 | |
| d1fmka3 | 285 | d.144.1.7 (A:249-533) c-src tyrosine kinase {Human | 5e-30 | |
| d1qpca_ | 272 | d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Hom | 4e-29 | |
| d1jpaa_ | 299 | d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mou | 8e-29 | |
| d2j4za1 | 263 | d.144.1.7 (A:126-388) Aurora-related kinase 1 (aur | 9e-29 | |
| d2java1 | 269 | d.144.1.7 (A:3-271) Serine/threonine-protein kinas | 2e-28 | |
| d1xbba_ | 277 | d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human | 4e-28 | |
| d1s9ja_ | 322 | d.144.1.7 (A:) Dual specificity mitogen-activated | 1e-27 | |
| d1u5ra_ | 309 | d.144.1.7 (A:) Serine/threonine protein kinase TAO | 2e-27 | |
| d1p4oa_ | 308 | d.144.1.7 (A:) Insulin-like growth factor 1 recept | 1e-26 | |
| d1xkka_ | 317 | d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb- | 1e-26 | |
| d1r0pa_ | 311 | d.144.1.7 (A:) Hepatocyte growth factor receptor, | 1e-26 | |
| d1u59a_ | 285 | d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Hum | 1e-26 | |
| d1rjba_ | 325 | d.144.1.7 (A:) Fl cytokine receptor {Human (Homo s | 3e-26 | |
| d1mqba_ | 283 | d.144.1.7 (A:) epha2 receptor tyrosine kinase {Hum | 5e-26 | |
| d1vjya_ | 303 | d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human | 8e-26 | |
| d1lufa_ | 301 | d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus n | 9e-26 | |
| d1t4ha_ | 270 | d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sa | 2e-25 | |
| d1t46a_ | 311 | d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens | 3e-25 | |
| d1fvra_ | 309 | d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [ | 4e-25 | |
| d2jfla1 | 288 | d.144.1.7 (A:21-308) STE20-like serine/threonine-p | 6e-25 | |
| d1yhwa1 | 293 | d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [ | 8e-25 | |
| d1mp8a_ | 273 | d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Huma | 1e-24 | |
| d1koaa2 | 350 | d.144.1.7 (A:5915-6264) Twitchin, kinase domain {C | 2e-24 | |
| d1u46a_ | 273 | d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Hum | 1e-23 | |
| d1tkia_ | 321 | d.144.1.7 (A:) Titin, kinase domain {Human (Homo s | 2e-23 | |
| d1koba_ | 352 | d.144.1.7 (A:) Twitchin, kinase domain {California | 9e-23 | |
| d1nvra_ | 271 | d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 { | 1e-22 | |
| d1xjda_ | 320 | d.144.1.7 (A:) Protein kinase C, theta type {Human | 3e-22 | |
| d1a06a_ | 307 | d.144.1.7 (A:) Calmodulin-dependent protein kinase | 6e-22 | |
| d1uu3a_ | 288 | d.144.1.7 (A:) 3-phosphoinositide dependent protei | 7e-22 | |
| d1ywna1 | 299 | d.144.1.7 (A:818-1166) Vascular endothelial growth | 8e-22 | |
| d1phka_ | 277 | d.144.1.7 (A:) gamma-subunit of glycogen phosphory | 4e-21 | |
| d1o6ya_ | 277 | d.144.1.7 (A:) Mycobacterial protein kinase PknB, | 5e-21 | |
| d1omwa3 | 364 | d.144.1.7 (A:186-549) G-protein coupled receptor k | 9e-21 | |
| d1jksa_ | 293 | d.144.1.7 (A:) Death-associated protein kinase, Da | 5e-20 | |
| d1fota_ | 316 | d.144.1.7 (A:) cAMP-dependent PK, catalytic subuni | 1e-19 | |
| d1fgka_ | 299 | d.144.1.7 (A:) Fibroblast growth factor receptor 1 | 2e-19 | |
| d1xwsa_ | 273 | d.144.1.7 (A:) Proto-oncogene serine/threonine-pro | 8e-19 | |
| d1ua2a_ | 299 | d.144.1.7 (A:) Cell division protein kinase 7, CDK | 2e-18 | |
| d2ozaa1 | 335 | d.144.1.7 (A:51-385) MAP kinase activated protein | 2e-17 | |
| d1pmea_ | 345 | d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapien | 3e-17 | |
| d1ckia_ | 299 | d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus n | 5e-17 | |
| d1blxa_ | 305 | d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (H | 2e-15 | |
| d1csna_ | 293 | d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast | 2e-15 | |
| d1ob3a_ | 286 | d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmod | 3e-15 | |
| d1o6la_ | 337 | d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sap | 4e-15 | |
| d1gz8a_ | 298 | d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (H | 4e-15 | |
| d1cm8a_ | 346 | d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo s | 7e-15 | |
| d1q5ka_ | 350 | d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gs | 7e-15 | |
| d1unla_ | 292 | d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (H | 7e-14 | |
| d1rdqe_ | 350 | d.144.1.7 (E:) cAMP-dependent PK, catalytic subuni | 2e-13 | |
| d3blha1 | 318 | d.144.1.7 (A:8-325) Cell division protein kinase 9 | 4e-13 | |
| d1vzoa_ | 322 | d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5 | 9e-13 | |
| d2gfsa1 | 348 | d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sa | 3e-09 | |
| d3bqca1 | 328 | d.144.1.7 (A:3-330) Protein kinase CK2, alpha subu | 3e-09 | |
| d1q8ya_ | 362 | d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces | 4e-09 | |
| d2c2la1 | 201 | a.118.8.1 (A:24-224) STIP1 homology and U box-cont | 2e-05 |
| >d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} Length = 258 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Bruton's tyrosine kinase (Btk) species: Human (Homo sapiens) [TaxId: 9606]
Score = 122 bits (307), Expect = 8e-33
Identities = 51/228 (22%), Positives = 102/228 (44%), Gaps = 11/228 (4%)
Query: 21 VLESSDLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWE 80
+++ + E +EEAK + NL E+L L G C + ++ E+M N L +L
Sbjct: 35 MIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYL-REM 93
Query: 81 TQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRD 140
+ L + + +A+EY SK L+ DL A L + G ++S FGL + D
Sbjct: 94 RHRFQTQQLLEMCKDVCEAMEYLESKQF-LHRDLAARNCLVNDQGVVKVSDFGLSRYVLD 152
Query: 141 GKSYSTN-----LAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSK 195
+ S+ + ++PPE + + + +S +++FG ++ ++ S +P +
Sbjct: 153 DEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYER----FTNS 208
Query: 196 NFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERPNAKSLVISLM 243
+ L + + ++ + C +A ERP K L+ +++
Sbjct: 209 ETAEHIAQGLRLYRPHLASEKVYTIMYSCWHEKADERPTFKILLSNIL 256
|
| >d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} Length = 263 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase Itk/Tsk species: Human (Homo sapiens) [TaxId: 9606]
Score = 122 bits (306), Expect = 1e-32
Identities = 45/232 (19%), Positives = 93/232 (40%), Gaps = 11/232 (4%)
Query: 21 VLESSDLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWE 80
+ + E +EEA+ + L +L L G C E LV EFM + L+ + +
Sbjct: 36 TIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDY-LRTQ 94
Query: 81 TQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRD 140
L + L + + + Y ++ DL A L ++ ++S FG+ + D
Sbjct: 95 RGLFAAETLLGMCLDVCEGMAYLEEAC-VIHRDLAARNCLVGENQVIKVSDFGMTRFVLD 153
Query: 141 GKSYSTN-----LAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSK 195
+ S+ + + PE R + +S V+SFG ++ ++ S IP + +
Sbjct: 154 DQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYEN----RSNS 209
Query: 196 NFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERPNAKSLVISLMSLQK 247
+ + + + T + ++ + C + +RP L+ L + +
Sbjct: 210 EVVEDISTGFRLYKPRLASTHVYQIMNHCWKERPEDRPAFSRLLRQLAEIAE 261
|
| >d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} Length = 287 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Abelsone tyrosine kinase (abl) species: Mouse (Mus musculus) [TaxId: 10090]
Score = 120 bits (303), Expect = 5e-32
Identities = 44/223 (19%), Positives = 92/223 (41%), Gaps = 10/223 (4%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQPMKWAMRLRV 92
L+EA + ++ L L+G C ++ EFM L +L Q + + L +
Sbjct: 61 LKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYM 120
Query: 93 ALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYST-----N 147
A ++ A+EY K ++ DL A L ++ +++ FGL + +
Sbjct: 121 ATQISSAMEYLEKKNF-IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFP 179
Query: 148 LAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEG 207
+ +T PE + + + +S V++FG +L ++ + P +DL L++
Sbjct: 180 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGM-SPYPGIDL---SQVYELLEKDYRM 235
Query: 208 HFSNDEGTELVRLASRCLQSEARERPNAKSLVISLMSLQKEAE 250
++ L C Q +RP+ + + ++ +E+
Sbjct: 236 ERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESS 278
|
| >d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} Length = 262 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Carboxyl-terminal src kinase (csk) species: Human (Homo sapiens) [TaxId: 9606]
Score = 120 bits (302), Expect = 5e-32
Identities = 51/217 (23%), Positives = 93/217 (42%), Gaps = 7/217 (3%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERL-LVAEFMPNETLAKHLFHWETQPMKWAMRLR 91
L EA + LR L L+G E L +V E+M +L +L + L+
Sbjct: 48 LAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLK 107
Query: 92 VALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKN-SRDGKSYSTNLAF 150
+L + +A+EY ++ DL A +L +D ++S FGL K S + + +
Sbjct: 108 FSLDVCEAMEYLEGNNF-VHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKW 166
Query: 151 TPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFS 210
T PE +R + + +S V+SFG +L ++ S +P I K+ + ++ +
Sbjct: 167 TAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPR----IPLKDVVPRVEKGYKMDAP 222
Query: 211 NDEGTELVRLASRCLQSEARERPNAKSLVISLMSLQK 247
+ + + C +A RP+ L L ++
Sbjct: 223 DGCPPAVYEVMKNCWHLDAAMRPSFLQLREQLEHIKT 259
|
| >d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 276 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: B-Raf kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 116 bits (293), Expect = 1e-30
Identities = 47/229 (20%), Positives = 95/229 (41%), Gaps = 20/229 (8%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQPMKWAMRLRV 92
E + R + +G + +V ++ +L HL ET + + +
Sbjct: 52 KNEVGVLRKTRHVNILLFMGYSTA-PQLAIVTQWCEGSSLYHHLHIIET-KFEMIKLIDI 109
Query: 93 ALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGL--MKNSRDGKSYSTNLAF 150
A AQ ++Y +K ++ DL + I +D ++ FGL +K+ G L+
Sbjct: 110 ARQTAQGMDYLHAKSI-IHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSG 168
Query: 151 TP----PEYMRT---GRVTPESVVYSFGTMLLDLLSGK----HIPPSHALDLIRSKNFLL 199
+ PE +R + +S VY+FG +L +L++G+ +I + + + +L
Sbjct: 169 SILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLS 228
Query: 200 LMDSALEGHFSNDEGTELVRLASRCLQSEARERPNAKSLVISLMSLQKE 248
S + + + RL + CL+ + ERP ++ S+ L +
Sbjct: 229 PDLSKVRSNCPK----AMKRLMAECLKKKRDERPLFPQILASIELLARS 273
|
| >d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 285 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-src tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 115 bits (288), Expect = 5e-30
Identities = 53/240 (22%), Positives = 97/240 (40%), Gaps = 13/240 (5%)
Query: 21 VLESSDLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWE 80
L+ + L+EA+ + LR E+L L + +V E+M +L L
Sbjct: 48 TLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV-SEEPIYIVTEYMSKGSLLDFLKGET 106
Query: 81 TQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRD 140
+ ++ + +A +A + Y ++ DL A IL ++ +++ FGL + D
Sbjct: 107 GKYLRLPQLVDMAAQIASGMAYVERMNY-VHRDLRAANILVGENLVCKVADFGLARLIED 165
Query: 141 GKSYSTN-----LAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSK 195
+ + + +T PE GR T +S V+SFG +L +L + +P ++ +
Sbjct: 166 NEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVN----R 221
Query: 196 NFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERPNAKSLVISLMSLQKEAEQVPSY 255
L ++ + L L +C + E ERP + L L E P Y
Sbjct: 222 EVLDQVERGYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTE--PQY 279
|
| >d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} Length = 272 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Lymphocyte kinase (lck) species: Human (Homo sapiens) [TaxId: 9606]
Score = 112 bits (282), Expect = 4e-29
Identities = 46/227 (20%), Positives = 93/227 (40%), Gaps = 11/227 (4%)
Query: 21 VLESSDLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWE 80
L+ + L EA + L+ +RL L + + ++ E+M N +L L
Sbjct: 44 SLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTPS 102
Query: 81 TQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRD 140
+ L +A +A+ + + + ++ DL A IL + +++ FGL + D
Sbjct: 103 GIKLTINKLLDMAAQIAEGMAFIEERNY-IHRDLRAANILVSDTLSCKIADFGLARLIED 161
Query: 141 GKSYSTN-----LAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSK 195
+ + + +T PE + G T +S V+SFG +L ++++ IP + +
Sbjct: 162 NEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPG----MTNP 217
Query: 196 NFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERPNAKSLVISL 242
+ ++ ++ EL +L C + +RP L L
Sbjct: 218 EVIQNLERGYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVL 264
|
| >d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: ephb2 receptor tyrosine kinase species: Mouse (Mus musculus) [TaxId: 10090]
Score = 112 bits (281), Expect = 8e-29
Identities = 44/231 (19%), Positives = 94/231 (40%), Gaps = 15/231 (6%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQPMKWAMRLRV 92
L EA +G + +L G ++ +++ EFM N +L + +
Sbjct: 75 LSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSL-DSFLRQNDGQFTVIQLVGM 133
Query: 93 ALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTN----- 147
+A ++Y + ++ DL A IL + + ++S FGL + D S T
Sbjct: 134 LRGIAAGMKYLADMNY-VHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALG 192
Query: 148 ----LAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDS 203
+ +T PE ++ + T S V+S+G ++ +++S P + +++ + ++
Sbjct: 193 GKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWD----MTNQDVINAIEQ 248
Query: 204 ALEGHFSNDEGTELVRLASRCLQSEARERPNAKSLVISLMSLQKEAEQVPS 254
D + L +L C Q + RP +V +L + + + +
Sbjct: 249 DYRLPPPMDCPSALHQLMLDCWQKDRNHRPKFGQIVNTLDKMIRNPNSLKA 299
|
| >d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 263 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Aurora-related kinase 1 (aurora-2) species: Human (Homo sapiens) [TaxId: 9606]
Score = 111 bits (279), Expect = 9e-29
Identities = 49/225 (21%), Positives = 86/225 (38%), Gaps = 12/225 (5%)
Query: 17 LKSSVLESSDLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHL 76
L + LE + + L E + +LR + L G ++A L+ E+ P T+ + L
Sbjct: 39 LFKAQLEKAGVEHQL-RREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL 97
Query: 77 FHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMK 136
LA AL YC SK ++ D+ +L G +++ FG
Sbjct: 98 QKL--SKFDEQRTATYITELANALSYCHSKR-VIHRDIKPENLLLGSAGELKIADFGWSV 154
Query: 137 NSRDGKSYSTN--LAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRS 194
++ + + L + PPE + + ++S G + + L GK PP A
Sbjct: 155 HAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK--PPFEANTYQE- 211
Query: 195 KNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERPNAKSLV 239
S +E F + L SR L+ +RP + ++
Sbjct: 212 ---TYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVL 253
|
| >d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} Length = 269 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine-protein kinase Nek2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 110 bits (276), Expect = 2e-28
Identities = 45/223 (20%), Positives = 77/223 (34%), Gaps = 25/223 (11%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERLL--VAEFMPNETLAKHLFHW--ETQPMKWAM 88
+ E + L+ + + L V E+ LA + E Q +
Sbjct: 51 VSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEF 110
Query: 89 RLRVALYLAQALEYCSSKGRALYH----DLNAYRILFDKDGNPRLSSFGLMKNSRDGKSY 144
LRV L AL+ C + + DL + D N +L FGL + S+
Sbjct: 111 VLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSF 170
Query: 145 STNLAFTP----PEYMRTGRVTPESVVYSFGTMLLDLLSGKH----IPPSHALDLIRSKN 196
+ TP PE M +S ++S G +L +L + IR
Sbjct: 171 AKAFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGK 230
Query: 197 FLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERPNAKSLV 239
F + +S+ EL + +R L + RP+ + ++
Sbjct: 231 FR-----RIPYRYSD----ELNEIITRMLNLKDYHRPSVEEIL 264
|
| >d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} Length = 277 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase SYK species: Human (Homo sapiens) [TaxId: 9606]
Score = 110 bits (275), Expect = 4e-28
Identities = 46/233 (19%), Positives = 93/233 (39%), Gaps = 17/233 (7%)
Query: 17 LKSSVLESSDLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHL 76
LK+ + + E L EA + L + + +IG C EA+ +LV E L K+L
Sbjct: 42 LKNEANDPALKDELLA--EANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYL 98
Query: 77 FHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMK 136
+ + +K + + ++ ++Y ++ DL A +L ++S FGL K
Sbjct: 99 --QQNRHVKDKNIIELVHQVSMGMKYLEESNF-VHRDLAARNVLLVTQHYAKISDFGLSK 155
Query: 137 NSRDGKSYSTN-------LAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHAL 189
R ++Y + + PE + + + +S V+SFG ++ + S P
Sbjct: 156 ALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRG-- 213
Query: 190 DLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERPNAKSLVISL 242
++ +++ E+ L + C + RP ++ + L
Sbjct: 214 --MKGSEVTAMLEKGERMGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRL 264
|
| >d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 110 bits (275), Expect = 1e-27
Identities = 44/246 (17%), Positives = 86/246 (34%), Gaps = 42/246 (17%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQPMKWAMRLRV 92
+ E + + S + G Y E + E M +L + L + + + +V
Sbjct: 52 IRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVL--KKAGRIPEQILGKV 109
Query: 93 ALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYST--NLAF 150
++ + + L Y K + ++ D+ IL + G +L FG+ D + S ++
Sbjct: 110 SIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSY 169
Query: 151 TPPEYMRTGRVTPESVVYSFGTMLLDLLSGKH-IPPSHALDLIRSKNFLLLMDSALEGHF 209
PE ++ + +S ++S G L+++ G++ IPP A +L + D+A
Sbjct: 170 MSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPR 229
Query: 210 SNDEGT-------------------------------------ELVRLASRCLQSEARER 232
G E ++CL ER
Sbjct: 230 PRTPGRPLSSYGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAER 289
Query: 233 PNAKSL 238
+ K L
Sbjct: 290 ADLKQL 295
|
| >d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 309 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine protein kinase TAO2 species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 108 bits (272), Expect = 2e-27
Identities = 42/210 (20%), Positives = 70/210 (33%), Gaps = 10/210 (4%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQPMKWAMRLRV 92
++E + + LR GC LV E+ H +P++ V
Sbjct: 63 IKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYCLGSASDLLEVH--KKPLQEVEIAAV 120
Query: 93 ALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLAFTP 152
Q L Y S ++ D+ A IL + G +L FG S+ +
Sbjct: 121 THGALQGLAYLHSHNM-IHRDVKAGNILLSEPGLVKLGDFGSASIMAPANSFVGTPYWMA 179
Query: 153 PEY---MRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHF 209
PE M G+ + V+S G ++L K + + GH+
Sbjct: 180 PEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPALQSGHW 239
Query: 210 SNDEGTELVRLASRCLQSEARERPNAKSLV 239
S CLQ ++RP ++ L+
Sbjct: 240 SE----YFRNFVDSCLQKIPQDRPTSEVLL 265
|
| >d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 308 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Insulin-like growth factor 1 receptor species: Human (Homo sapiens) [TaxId: 9606]
Score = 106 bits (266), Expect = 1e-26
Identities = 44/245 (17%), Positives = 89/245 (36%), Gaps = 29/245 (11%)
Query: 17 LKSSVLESSDLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHL 76
+K+ +S L EA + + L+G + L++ E M L +L
Sbjct: 55 IKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYL 114
Query: 77 FHW--------ETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPR 128
P + +++A +A + Y ++ ++ DL A + +D +
Sbjct: 115 RSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANKF-VHRDLAARNCMVAEDFTVK 173
Query: 129 LSSFGLMKNSRDGKSYSTN------LAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKH 182
+ FG+ ++ + Y + + PE ++ G T S V+SFG +L ++ +
Sbjct: 174 IGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAE 233
Query: 183 IP-----PSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERPNAKS 237
P L + L D+ + L L C Q + RP+
Sbjct: 234 QPYQGLSNEQVLRFVMEGGLLDKPDNCPD---------MLFELMRMCWQYNPKMRPSFLE 284
Query: 238 LVISL 242
++ S+
Sbjct: 285 IISSI 289
|
| >d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 317 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: EGF receptor tyrosine kinase, Erbb-1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 106 bits (266), Expect = 1e-26
Identities = 39/246 (15%), Positives = 93/246 (37%), Gaps = 13/246 (5%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQPMKWAMRLRV 92
L+EA + ++ + + L+G C + +L+ + MP L + + L
Sbjct: 59 LDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDY-VREHKDNIGSQYLLNW 116
Query: 93 ALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTN----- 147
+ +A+ + Y + ++ DL A +L + +++ FGL K +
Sbjct: 117 CVQIAKGMNYLEDRRL-VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV 175
Query: 148 -LAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALE 206
+ + E + T +S V+S+G + +L++ P D I + +++
Sbjct: 176 PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPY----DGIPASEISSILEKGER 231
Query: 207 GHFSNDEGTELVRLASRCLQSEARERPNAKSLVISLMSLQKEAEQVPSYVLLGIQHETAP 266
++ + +C +A RP + L+I + ++ ++ H +P
Sbjct: 232 LPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDPQRYLVIQGDERMHLPSP 291
Query: 267 STKPLS 272
+
Sbjct: 292 TDSNFY 297
|
| >d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} Length = 311 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Hepatocyte growth factor receptor, c-MET species: Human (Homo sapiens) [TaxId: 9606]
Score = 106 bits (266), Expect = 1e-26
Identities = 47/225 (20%), Positives = 100/225 (44%), Gaps = 15/225 (6%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADER-LLVAEFMPNETLAKHLFHWETQPMKWAMRLR 91
L E + + + +L+G C ++ L+V +M + L ++ ET +
Sbjct: 76 LTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDL-RNFIRNETHNPTVKDLIG 134
Query: 92 VALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTN---- 147
L +A+ +++ +SK ++ DL A + D+ +++ FGL ++ D + S +
Sbjct: 135 FGLQVAKGMKFLASKKF-VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTG 193
Query: 148 ----LAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDS 203
+ + E ++T + T +S V+SFG +L +L++ PP ++ +LL
Sbjct: 194 AKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGA-PPYPDVNTFDITVYLLQGRR 252
Query: 204 ALEGHFSNDEGTELVRLASRCLQSEARERPNAKSLVISLMSLQKE 248
L+ + D L + +C +A RP+ LV + ++
Sbjct: 253 LLQPEYCPD---PLYEVMLKCWHPKAEMRPSFSELVSRISAIFST 294
|
| >d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} Length = 285 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase ZAP-70 species: Human (Homo sapiens) [TaxId: 9606]
Score = 105 bits (264), Expect = 1e-26
Identities = 48/229 (20%), Positives = 90/229 (39%), Gaps = 18/229 (7%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQPMKWAMRLRV 92
+ EA+ + L + + LIG C +A+ +LV E L K L + + + +
Sbjct: 57 MREAQIMHQLDNPYIVRLIGVC-QAEALMLVMEMAGGGPLHKFLVGKR-EEIPVSNVAEL 114
Query: 93 ALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTN----- 147
++ ++Y K ++ DL A +L ++S FGL K SY T
Sbjct: 115 LHQVSMGMKYLEEKNF-VHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGK 173
Query: 148 --LAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSAL 205
L + PE + + + S V+S+G + + LS P ++ + ++
Sbjct: 174 WPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKK----MKGPEVMAFIEQGK 229
Query: 206 EGHFSNDEGTELVRLASRCLQSEARERPNAKSLVISL----MSLQKEAE 250
+ EL L S C + +RP+ ++ + SL + E
Sbjct: 230 RMECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYYSLASKVE 278
|
| >d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 325 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fl cytokine receptor species: Human (Homo sapiens) [TaxId: 9606]
Score = 105 bits (263), Expect = 3e-26
Identities = 48/239 (20%), Positives = 89/239 (37%), Gaps = 34/239 (14%)
Query: 33 LEEAKAVGNLRS-ERLANLIGCCYEADERLLVAEFMPNETLAKHLF-------------- 77
+ E K + L S E + NL+G C + L+ E+ L +L
Sbjct: 88 MSELKMMTQLGSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYE 147
Query: 78 -------HWETQPMKWAMRLRVALYLAQALEYCSSKGRALYH-DLNAYRILFDKDGNPRL 129
+ + + L A +A+ +E+ K H DL A +L ++
Sbjct: 148 NQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKS--CVHRDLAARNVLVTHGKVVKI 205
Query: 130 SSFGLMKNSRDGKSYSTN------LAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHI 183
FGL ++ +Y + + PE + G T +S V+S+G +L ++ S
Sbjct: 206 CDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVN 265
Query: 184 PPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERPNAKSLVISL 242
P + NF L+ + + E+ + C ++R+RP+ +L L
Sbjct: 266 PYP---GIPVDANFYKLIQNGFKMDQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFL 321
|
| >d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 283 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: epha2 receptor tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 104 bits (260), Expect = 5e-26
Identities = 42/245 (17%), Positives = 93/245 (37%), Gaps = 13/245 (5%)
Query: 17 LKSSVLESSDLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHL 76
+K+ ++ L EA +G + L G + +++ E+M N
Sbjct: 41 IKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMIITEYMENGA-LDKF 99
Query: 77 FHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMK 136
+ + + +A ++Y ++ + DL A IL + + ++S FGL +
Sbjct: 100 LREKDGEFSVLQLVGMLRGIAAGMKYLANMNYV-HRDLAARNILVNSNLVCKVSDFGLSR 158
Query: 137 NSRDGKSYSTN-------LAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHAL 189
D + + +T PE + + T S V+SFG ++ ++++ P
Sbjct: 159 VLEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWE-- 216
Query: 190 DLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERPNAKSLVISLMSLQKEA 249
+ + + ++ D + + +L +C Q E RP +V L L +
Sbjct: 217 --LSNHEVMKAINDGFRLPTPMDCPSAIYQLMMQCWQQERARRPKFADIVSILDKLIRAP 274
Query: 250 EQVPS 254
+ + +
Sbjct: 275 DSLKT 279
|
| >d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} Length = 303 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Type I TGF-beta receptor R4 species: Human (Homo sapiens) [TaxId: 9606]
Score = 104 bits (259), Expect = 8e-26
Identities = 36/269 (13%), Positives = 82/269 (30%), Gaps = 44/269 (16%)
Query: 21 VLESSDLGETLNLEEAKAVGNLRSERLANLIGCCYEAD----ERLLVAEFMPNETLAKHL 76
+ S + E LR E + I + + + LV+++ + +L +L
Sbjct: 33 IFSSREERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYL 92
Query: 77 FHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYH-------DLNAYRILFDKDGNPRL 129
+ +++AL A L + + DL + IL K+G +
Sbjct: 93 NR---YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCI 149
Query: 130 SSFGLMKNSRDGKSY----STNLAFTP----PEYMRT------GRVTPESVVYSFGTMLL 175
+ GL + T PE + + +Y+ G +
Sbjct: 150 ADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFW 209
Query: 176 DLLSGKHIPPSH---------------ALDLIRSKNFLLLMDSALEGHFSNDEGT-ELVR 219
++ I H +++ +R + + + + E + +
Sbjct: 210 EIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAK 269
Query: 220 LASRCLQSEARERPNAKSLVISLMSLQKE 248
+ C + R A + +L L ++
Sbjct: 270 IMRECWYANGAARLTALRIKKTLSQLSQQ 298
|
| >d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 301 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Musk tyrosine kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 104 bits (259), Expect = 9e-26
Identities = 48/248 (19%), Positives = 88/248 (35%), Gaps = 43/248 (17%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHW------------- 79
EA + + + L+G C L+ E+M L + L
Sbjct: 64 QREAALMAEFDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDL 123
Query: 80 ---------ETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLS 130
P+ A +L +A +A + Y S + ++ DL L ++ +++
Sbjct: 124 STRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERKF-VHRDLATRNCLVGENMVVKIA 182
Query: 131 SFGLMKNSRDGKSYSTN------LAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIP 184
FGL +N Y + + + PPE + R T ES V+++G +L ++ S P
Sbjct: 183 DFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQP 242
Query: 185 -----PSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERPNAKSLV 239
+ +R N L ++ EL L C +RP+ S+
Sbjct: 243 YYGMAHEEVIYYVRDGNILACPENCPL---------ELYNLMRLCWSKLPADRPSFCSIH 293
Query: 240 ISLMSLQK 247
L + +
Sbjct: 294 RILQRMCE 301
|
| >d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 270 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase wnk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 102 bits (256), Expect = 2e-25
Identities = 39/215 (18%), Positives = 80/215 (37%), Gaps = 14/215 (6%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADER----LLVAEFMPNETLAKHLFHWETQPMKWAM 88
EEA+ + L+ + + +LV E M + TL +L + MK +
Sbjct: 56 KEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVTELMTSGTLKTYLK--RFKVMKIKV 113
Query: 89 RLRVALYLAQALEYCSSKGRALYH-DLNAYRILF-DKDGNPRLSSFGLMKNSRDGKSYST 146
+ + L++ ++ + H DL I G+ ++ GL R + +
Sbjct: 114 LRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRASFAKAV 173
Query: 147 --NLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSA 204
F PE + VY+FG +L++ + ++ P S + ++ + +
Sbjct: 174 IGTPEFMAPEMYE-EKYDESVDVYAFGMCMLEMATSEY-PYSECQN--AAQIYRRVTSGV 229
Query: 205 LEGHFSNDEGTELVRLASRCLQSEARERPNAKSLV 239
F E+ + C++ ER + K L+
Sbjct: 230 KPASFDKVAIPEVKEIIEGCIRQNKDERYSIKDLL 264
|
| >d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 311 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-KIT receptor species: Human (Homo sapiens) [TaxId: 9606]
Score = 102 bits (256), Expect = 3e-25
Identities = 45/239 (18%), Positives = 84/239 (35%), Gaps = 27/239 (11%)
Query: 33 LEEAKAVGNL-RSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHW------------ 79
+ E K + L + NL+G C L++ E+ L L
Sbjct: 74 MSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPA 133
Query: 80 ----ETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLM 135
+ + L + +A+ + + +SK ++ DL A IL ++ FGL
Sbjct: 134 IMEDDELALDLEDLLSFSYQVAKGMAFLASKNC-IHRDLAARNILLTHGRITKICDFGLA 192
Query: 136 KNSRDGKSY-STNLAFTPPEYM-----RTGRVTPESVVYSFGTMLLDLLSGKHIPPSHAL 189
++ ++ +Y A P ++M T ES V+S+G L +L S P
Sbjct: 193 RDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPG-- 250
Query: 190 DLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERPNAKSLVISLMSLQKE 248
+ F ++ E+ + C ++ +RP K +V + E
Sbjct: 251 -MPVDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQISE 308
|
| >d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 309 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tie2 kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 102 bits (254), Expect = 4e-25
Identities = 43/236 (18%), Positives = 87/236 (36%), Gaps = 23/236 (9%)
Query: 33 LEEAKAVGNL-RSERLANLIGCCYEADERLLVAEFMPNETLAKHL--------------F 77
E + + L + NL+G C L E+ P+ L L
Sbjct: 58 AGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIA 117
Query: 78 HWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKN 137
+ + L A +A+ ++Y S K ++ DL A IL ++ +++ FGL +
Sbjct: 118 NSTASTLSSQQLLHFAADVARGMDYLSQKQF-IHRDLAARNILVGENYVAKIADFGLSRG 176
Query: 138 SRDGKSYSTN---LAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRS 194
+ + + E + T S V+S+G +L +++S P +
Sbjct: 177 QEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCG----MTC 232
Query: 195 KNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERPNAKSLVISLMSLQKEAE 250
+ + E+ L +C + + ERP+ +++SL + +E +
Sbjct: 233 AELYEKLPQGYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEERK 288
|
| >d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} Length = 288 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: STE20-like serine/threonine-protein kinase, SLK species: Human (Homo sapiens) [TaxId: 9606]
Score = 101 bits (253), Expect = 6e-25
Identities = 37/215 (17%), Positives = 73/215 (33%), Gaps = 14/215 (6%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQPMKWAMRLRV 92
+ E + + + L+ Y + ++ EF + + E +P+ + V
Sbjct: 57 MVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELE-RPLTESQIQVV 115
Query: 93 ALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYST----NL 148
AL Y ++ DL A ILF DG+ +L+ FG+ +
Sbjct: 116 CKQTLDALNYLHDNK-IIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRDSFIGTP 174
Query: 149 AFTPPEYMRT-----GRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDS 203
+ PE + ++ V+S G L+++ + PP H L+ +R +
Sbjct: 175 YWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIE--PPHHELNPMRVL-LKIAKSE 231
Query: 204 ALEGHFSNDEGTELVRLASRCLQSEARERPNAKSL 238
+ + +CL+ R L
Sbjct: 232 PPTLAQPSRWSSNFKDFLKKCLEKNVDARWTTSQL 266
|
| >d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} Length = 293 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: pak1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 101 bits (252), Expect = 8e-25
Identities = 44/210 (20%), Positives = 85/210 (40%), Gaps = 11/210 (5%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQPMKWAMRLRV 92
+ E + ++ + N + DE +V E++ +L + M V
Sbjct: 65 INEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTET---CMDEGQIAAV 121
Query: 93 ALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLAFTP 152
QALE+ S ++ D+ + IL DG+ +L+ FG +S + + TP
Sbjct: 122 CRECLQALEFLHSNQ-VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTP 180
Query: 153 ----PEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGH 208
PE + P+ ++S G M ++++ G+ PP + +R+ +L+ + E
Sbjct: 181 YWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGE--PPYLNENPLRAL-YLIATNGTPELQ 237
Query: 209 FSNDEGTELVRLASRCLQSEARERPNAKSL 238
+RCL + +R +AK L
Sbjct: 238 NPEKLSAIFRDFLNRCLDMDVEKRGSAKEL 267
|
| >d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} Length = 273 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Focal adhesion kinase 1 (fak) species: Human (Homo sapiens) [TaxId: 9606]
Score = 100 bits (249), Expect = 1e-24
Identities = 49/242 (20%), Positives = 87/242 (35%), Gaps = 22/242 (9%)
Query: 17 LKSSVLESSDLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHL 76
+K+ +SD L+EA + + LIG E + ++ E L +
Sbjct: 40 IKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITE-NPVWIIMELCTLGEL-RSF 97
Query: 77 FHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMK 136
+ A + A L+ AL Y SK ++ D+ A +L + +L FGL +
Sbjct: 98 LQVRKYSLDLASLILYAYQLSTALAYLESKRF-VHRDIAARNVLVSSNDCVKLGDFGLSR 156
Query: 137 NSRDGKSYSTNLAFTPPEYM-----RTGRVTPESVVYSFGTMLLDLLSGKHIP-----PS 186
D Y + P ++M R T S V+ FG + ++L P +
Sbjct: 157 YMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNN 216
Query: 187 HALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERPNAKSLVISLMSLQ 246
+ I + L + + L L ++C + RP L L ++
Sbjct: 217 DVIGRIENGERLPMPPNCPP---------TLYSLMTKCWAYDPSRRPRFTELKAQLSTIL 267
Query: 247 KE 248
+E
Sbjct: 268 EE 269
|
| >d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} Length = 350 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: Caenorhabditis elegans, pjk4 [TaxId: 6239]
Score = 101 bits (252), Expect = 2e-24
Identities = 49/262 (18%), Positives = 91/262 (34%), Gaps = 19/262 (7%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQPMKWAMRLRV 92
+E + + LR L NL + +E +++ EFM L + + E M +
Sbjct: 71 RKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVAD-EHNKMSEDEAVEY 129
Query: 93 ALYLAQALEYCSSKGRALYHDLNAYRILF--DKDGNPRLSSFGLMKNSRDGKSYST---N 147
+ + L + ++ DL I+F + +L FGL + +S
Sbjct: 130 MRQVCKGLCHMHENN-YVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTTGT 188
Query: 148 LAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKH-IPPSHALDLIRS-KNFLLLMDSAL 205
F PE V + ++S G + LLSG + + +R+ K+ MD +
Sbjct: 189 AEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMDDSA 248
Query: 206 EGHFSNDEGTELVRLASRCLQSEARERPNAKSLV----ISLMSLQKEAEQVPSYVLLGIQ 261
S + + L ++ R + ++ + Q+PS I+
Sbjct: 249 FSGISE----DGKDFIRKLLLADPNTRMTIHQALEHPWLTPGNAPGRDSQIPSSRYTKIR 304
Query: 262 HETAPS--TKPLSLTPLGEACS 281
P L PLG +
Sbjct: 305 DSIKTKYDAWPEPLPPLGRISN 326
|
| >d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Activated CDC42 kinase 1, ACK1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 97.5 bits (242), Expect = 1e-23
Identities = 48/242 (19%), Positives = 83/242 (34%), Gaps = 24/242 (9%)
Query: 17 LKSSVLESSDLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHL 76
LK VL + + + E A+ +L L L G +V E P +L
Sbjct: 44 LKPDVLSQPEAMDDF-IREVNAMHSLDHRNLIRLYGVVLT-PPMKMVTELAPLGSLLDR- 100
Query: 77 FHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMK 136
R A+ +A+ + Y SK ++ DL A +L ++ FGLM+
Sbjct: 101 LRKHQGHFLLGTLSRYAVQVAEGMGYLESKRF-IHRDLAARNLLLATRDLVKIGDFGLMR 159
Query: 137 NSRDGKSYSTN-------LAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIP----- 184
+ A+ PE ++T + S + FG L ++ + P
Sbjct: 160 ALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLN 219
Query: 185 PSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERPNAKSLVISLMS 244
S L I + L D ++ + +C + +RP +L L+
Sbjct: 220 GSQILHKIDKEGERL--------PRPEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLE 271
Query: 245 LQ 246
Q
Sbjct: 272 AQ 273
|
| >d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} Length = 321 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Titin, kinase domain species: Human (Homo sapiens) [TaxId: 9606]
Score = 98.2 bits (244), Expect = 2e-23
Identities = 35/225 (15%), Positives = 79/225 (35%), Gaps = 13/225 (5%)
Query: 21 VLESSDLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWE 80
++ + L +E + R + +L +E +++ EF+ + + + +
Sbjct: 37 FVKVKGTDQVLVKKEISILNIARHRNILHLHESFESMEELVMIFEFISGLDIFERI-NTS 95
Query: 81 TQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPR--LSSFGLMKNS 138
+ + + +AL++ S + D+ I++ + + FG +
Sbjct: 96 AFELNEREIVSYVHQVCEALQFLHSHNIG-HFDIRPENIIYQTRRSSTIKIIEFGQARQL 154
Query: 139 RDGKSYSTN---LAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSK 195
+ G ++ + PE + V+ + ++S GT++ LLSG + + I
Sbjct: 155 KPGDNFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIEN 214
Query: 196 --NFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERPNAKSL 238
N D S E + R L E + R A
Sbjct: 215 IMNAEYTFDEEAFKEISI----EAMDFVDRLLVKERKSRMTASEA 255
|
| >d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} Length = 352 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]
Score = 96.3 bits (239), Expect = 9e-23
Identities = 38/211 (18%), Positives = 71/211 (33%), Gaps = 9/211 (4%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQPMKWAMRLRV 92
E + L +L NL + E +L+ EF+ L + E M A +
Sbjct: 74 KNEISIMNQLHHPKLINLHDAFEDKYEMVLILEFLSGGELFDRI-AAEDYKMSEAEVINY 132
Query: 93 ALYLAQALEYCSSKGRALYHDLNAYRILFD--KDGNPRLSSFGLMKNSRDGKS---YSTN 147
+ L++ ++ D+ I+ + K + ++ FGL + +
Sbjct: 133 MRQACEGLKHMHEHSI-VHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVKVTTAT 191
Query: 148 LAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEG 207
F PE + V + +++ G + LLSG P D + + + D +
Sbjct: 192 AEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGL--SPFAGEDDLETLQNVKRCDWEFDE 249
Query: 208 HFSNDEGTELVRLASRCLQSEARERPNAKSL 238
+ E LQ E R+R
Sbjct: 250 DAFSSVSPEAKDFIKNLLQKEPRKRLTVHDA 280
|
| >d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 271 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell cycle checkpoint kinase chk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 94.7 bits (235), Expect = 1e-22
Identities = 36/213 (16%), Positives = 65/213 (30%), Gaps = 13/213 (6%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQPMKWAMRLRV 92
+E L E + G E + + L E+ L + M R
Sbjct: 51 KKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEP--DIGMPEPDAQRF 108
Query: 93 ALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTN----- 147
L + Y G + D+ +L D+ N ++S FGL R
Sbjct: 109 FHQLMAGVVYLHGIGI-THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCG 167
Query: 148 -LAFTPPEYMRTGRVTPESV-VYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSAL 205
L + PE ++ E V V+S G +L +L+G+ + + +
Sbjct: 168 TLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQ---EYSDWKEKKT 224
Query: 206 EGHFSNDEGTELVRLASRCLQSEARERPNAKSL 238
+ + + L + L R +
Sbjct: 225 YLNPWKKIDSAPLALLHKILVENPSARITIPDI 257
|
| >d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} Length = 320 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase C, theta type species: Human (Homo sapiens) [TaxId: 9606]
Score = 94.4 bits (234), Expect = 3e-22
Identities = 45/225 (20%), Positives = 81/225 (36%), Gaps = 13/225 (5%)
Query: 17 LKSSVLESSDLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHL 76
LK V+ D E +E+ L ++ + V E++ L H+
Sbjct: 35 LKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHI 94
Query: 77 FHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMK 136
+ A + L++ SKG +Y DL IL DKDG+ +++ FG+ K
Sbjct: 95 Q--SCHKFDLSRATFYAAEIILGLQFLHSKGI-VYRDLKLDNILLDKDGHIKIADFGMCK 151
Query: 137 NSRDGKSYSTNLAFT----PPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLI 192
+ G + + T PE + + +SFG +L ++L G+ P H D
Sbjct: 152 ENMLGDAKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQ--SPFHGQDEE 209
Query: 193 RSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERPNAKS 237
+ + + + E L + E +R +
Sbjct: 210 ELFHSIRMDNPFYPRWLEK----EAKDLLVKLFVREPEKRLGVRG 250
|
| >d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 307 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Calmodulin-dependent protein kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 93.2 bits (231), Expect = 6e-22
Identities = 32/211 (15%), Positives = 64/211 (30%), Gaps = 9/211 (4%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQPMKWAMRLRV 92
E + ++ + L L+ + + L + E R+
Sbjct: 55 ENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIV--EKGFYTERDASRL 112
Query: 93 ALYLAQALEYCSSKGRA--LYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYST---N 147
+ A++Y G N D+D +S FGL K G ST
Sbjct: 113 IFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGT 172
Query: 148 LAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEG 207
+ PE + + +S G + LL G PP + + + +L + +
Sbjct: 173 PGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGY--PPFYDENDAKLFEQILKAEYEFDS 230
Query: 208 HFSNDEGTELVRLASRCLQSEARERPNAKSL 238
+ +D ++ + +R +
Sbjct: 231 PYWDDISDSAKDFIRHLMEKDPEKRFTCEQA 261
|
| >d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 288 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: 3-phosphoinositide dependent protein kinase-1 Pdk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 92.8 bits (230), Expect = 7e-22
Identities = 36/222 (16%), Positives = 73/222 (32%), Gaps = 19/222 (8%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQPMKWAMRLRV 92
E + L L + ++ + N L K++
Sbjct: 56 TRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKI--GSFDETCTRFY 113
Query: 93 ALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG------KSYST 146
+ ALEY K ++ DL IL ++D + +++ FG K S+
Sbjct: 114 TAEIVSALEYLHGK-GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVG 172
Query: 147 NLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALE 206
+ PE + S +++ G ++ L++G PP R+ N L+ ++
Sbjct: 173 TAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGL--PP------FRAGNEYLIFQKIIK 224
Query: 207 GHFSNDEGT--ELVRLASRCLQSEARERPNAKSLVISLMSLQ 246
+ E + L + L +A +R + +
Sbjct: 225 LEYDFPEKFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKA 266
|
| >d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Vascular endothelial growth factor receptor 2 (kdr) species: Human (Homo sapiens) [TaxId: 9606]
Score = 93.0 bits (230), Expect = 8e-22
Identities = 44/233 (18%), Positives = 83/233 (35%), Gaps = 25/233 (10%)
Query: 34 EEAKAVGNLRSERLANLIGCCYEADERL-LVAEFMPNETLAKHLFH-------------- 78
E + + NL+G C + L ++ EF L+ +L
Sbjct: 66 ELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPED 125
Query: 79 WETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNS 138
+ + + +A+ +E+ +S+ ++ DL A IL + ++ FGL ++
Sbjct: 126 LYKDFLTLEHLICYSFQVAKGMEFLASRK-CIHRDLAARNILLSEKNVVKICDFGLARDI 184
Query: 139 RDGKSY-STNLAFTPPEYM-----RTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLI 192
Y A P ++M T +S V+SFG +L ++ S P +
Sbjct: 185 YKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYP---GVK 241
Query: 193 RSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERPNAKSLVISLMSL 245
+ F + + E+ + C E +RP LV L +L
Sbjct: 242 IDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNL 294
|
| >d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 277 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: gamma-subunit of glycogen phosphorylase kinase (Phk) species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 90.1 bits (223), Expect = 4e-21
Identities = 38/216 (17%), Positives = 70/216 (32%), Gaps = 15/216 (6%)
Query: 33 LEEAKAVGNLRSERLA-NLIGCCYEADERLLVAEFMPNETLAKHLFHWETQPMKWAMRLR 91
L+E + + L LV + M L +L E + +
Sbjct: 57 LKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLT--EKVTLSEKETRK 114
Query: 92 VALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYST---NL 148
+ L + + + DL IL D D N +L+ FG G+
Sbjct: 115 IMRALLEVICALHKLNIV-HRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLREVCGTP 173
Query: 149 AFTPPEYMRTGRV------TPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMD 202
++ PE + E ++S G ++ LL+G PP + ++ +
Sbjct: 174 SYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGS--PPFWHRKQMLMLRMIMSGN 231
Query: 203 SALEGHFSNDEGTELVRLASRCLQSEARERPNAKSL 238
+D + L SR L + ++R A+
Sbjct: 232 YQFGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEA 267
|
| >d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} Length = 277 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Mycobacterial protein kinase PknB, catalytic domain species: Mycobacterium tuberculosis [TaxId: 1773]
Score = 90.2 bits (223), Expect = 5e-21
Identities = 40/226 (17%), Positives = 72/226 (31%), Gaps = 17/226 (7%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERL----LVAEFMPNETLAKHLFHWETQPMKWAM 88
EA+ L + + +V E++ TL + PM
Sbjct: 55 RREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTE--GPMTPKR 112
Query: 89 RLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNL 148
+ V QAL + G ++ D+ I+ ++ FG+ + D + T
Sbjct: 113 AIEVIADACQALNFSHQNG-IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQT 171
Query: 149 -------AFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLM 201
+ PE R V S VYS G +L ++L+G+ PP + +
Sbjct: 172 AAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGE--PPFTGDSPVSVAYQHVRE 229
Query: 202 DSALEGHFSNDEGTELVRLASRCLQSEARERP-NAKSLVISLMSLQ 246
D +L + + L R A + L+ +
Sbjct: 230 DPIPPSARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRVH 275
|
| >d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} Length = 364 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: G-protein coupled receptor kinase 2 species: Cow (Bos taurus) [TaxId: 9913]
Score = 90.9 bits (225), Expect = 9e-21
Identities = 41/203 (20%), Positives = 70/203 (34%), Gaps = 9/203 (4%)
Query: 34 EEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQPMKWAMRLRVA 93
V + + + D+ + + M L HL A A
Sbjct: 56 IMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQH--GVFSEADMRFYA 113
Query: 94 LYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTN--LAFT 151
+ LE+ ++ +Y DL IL D+ G+ R+S GL + K +++ +
Sbjct: 114 AEIILGLEHMHNRFV-VYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVGTHGYM 172
Query: 152 PPEYMRTGR-VTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFS 210
PE ++ G + +S G ML LL G H + K+ + M +
Sbjct: 173 APEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKT---KDKHEIDRMTLTMAVELP 229
Query: 211 NDEGTELVRLASRCLQSEARERP 233
+ EL L LQ + R
Sbjct: 230 DSFSPELRSLLEGLLQRDVNRRL 252
|
| >d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} Length = 293 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Death-associated protein kinase, Dap species: Human (Homo sapiens) [TaxId: 9606]
Score = 87.5 bits (216), Expect = 5e-20
Identities = 31/213 (14%), Positives = 65/213 (30%), Gaps = 12/213 (5%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQPMKWAMRLRV 92
E + ++ + L + +L+ E + L E + +
Sbjct: 61 EREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDF--LAEKESLTEEEATEF 118
Query: 93 ALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPR----LSSFGLMKNSRDGKSYSTNL 148
+ + Y S A + DL I+ P+ + FGL G +
Sbjct: 119 LKQILNGVYYLHSLQIA-HFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF 177
Query: 149 ---AFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSAL 205
F PE + + E+ ++S G + LLSG + + ++
Sbjct: 178 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLAN--VSAVNYEF 235
Query: 206 EGHFSNDEGTELVRLASRCLQSEARERPNAKSL 238
E + ++ R L + ++R +
Sbjct: 236 EDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDS 268
|
| >d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 316 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: cAMP-dependent PK, catalytic subunit species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 87.1 bits (215), Expect = 1e-19
Identities = 39/204 (19%), Positives = 83/204 (40%), Gaps = 10/204 (4%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQPMKWAMRLRV 92
+E + + + + G +A + ++ +++ L ++Q +
Sbjct: 52 NDERLMLSIVTHPFIIRMWGTFQDAQQIFMIMDYIEGGEL--FSLLRKSQRFPNPVAKFY 109
Query: 93 ALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRD-GKSYSTNLAFT 151
A + ALEY SK +Y DL IL DK+G+ +++ FG K D + +
Sbjct: 110 AAEVCLALEYLHSKD-IIYRDLKPENILLDKNGHIKITDFGFAKYVPDVTYTLCGTPDYI 168
Query: 152 PPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSN 211
PE + T +SFG ++ ++L+G P + + +++ +L + F+
Sbjct: 169 APEVVSTKPYNKSIDWWSFGILIYEMLAGY--TPFYDSNTMKTYEKILNAELRFPPFFNE 226
Query: 212 DEGTELVRLASRCLQSEARERPNA 235
++ L SR + + +R
Sbjct: 227 ----DVKDLLSRLITRDLSQRLGN 246
|
| >d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fibroblast growth factor receptor 1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 85.7 bits (211), Expect = 2e-19
Identities = 44/231 (19%), Positives = 90/231 (38%), Gaps = 26/231 (11%)
Query: 33 LEEAKAVGNLRSER-LANLIGCCYEADERLLVAEFMPNETLAKHLFHW------------ 79
+ E + + + + + NL+G C + ++ E+ L ++L
Sbjct: 66 ISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPS 125
Query: 80 --ETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKN 137
+ + + A +A+ +EY +SK ++ DL A +L +D +++ FGL ++
Sbjct: 126 HNPEEQLSSKDLVSCAYQVARGMEYLASKKC-IHRDLAARNVLVTEDNVMKIADFGLARD 184
Query: 138 SRDGKSY-STNLAFTPPEYM-----RTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDL 191
Y T P ++M T +S V+SFG +L ++ + P + +
Sbjct: 185 IHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGG-SPYPGVPV 243
Query: 192 IRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERPNAKSLVISL 242
+ L+ ++ EL + C + +RP K LV L
Sbjct: 244 ---EELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDL 291
|
| >d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Proto-oncogene serine/threonine-protein kinase Pim-1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 83.6 bits (206), Expect = 8e-19
Identities = 44/212 (20%), Positives = 79/212 (37%), Gaps = 20/212 (9%)
Query: 33 LEEAKAVGNLRS--ERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQPMKWAMRL 90
E + + S + L+ D +L+ E E ++ +
Sbjct: 55 PMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFIT-ERGALQEELAR 113
Query: 91 RVALYLAQALEYCSSKGRALYHDLNAYRILFDKD-GNPRLSSFGLMKNSRDG--KSYSTN 147
+ +A+ +C + G L+ D+ IL D + G +L FG +D +
Sbjct: 114 SFFWQVLEAVRHCHNCGV-LHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGT 172
Query: 148 LAFTPPEYMRTGRVTPESV-VYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALE 206
++PPE++R R S V+S G +L D++ G P H ++IR + F
Sbjct: 173 RVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDI-PFEHDEEIIRGQVF--------- 222
Query: 207 GHFSNDEGTELVRLASRCLQSEARERPNAKSL 238
F +E L CL +RP + +
Sbjct: 223 --FRQRVSSECQHLIRWCLALRPSDRPTFEEI 252
|
| >d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell division protein kinase 7, CDK7 species: Human (Homo sapiens) [TaxId: 9606]
Score = 83.4 bits (205), Expect = 2e-18
Identities = 42/248 (16%), Positives = 70/248 (28%), Gaps = 30/248 (12%)
Query: 18 KSSVLESSDLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLF 77
E+ D L E K + L + L+ LV +FM + +
Sbjct: 33 LGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNISLVFDFMETDLE--VII 90
Query: 78 HWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKN 137
+ + + L Q LEY + DL +L D++G +L+ FGL K+
Sbjct: 91 KDNSLVLTPSHIKAYMLMTLQGLEYLHQHWIL-HRDLKPNNLLLDENGVLKLADFGLAKS 149
Query: 138 SRDGKSYSTNLAFT-----PPEYMRTGRVTPESVVYSFGTMLLDLLSGKHI--------- 183
T+ T P +++ G +L +LL
Sbjct: 150 FGSPNRAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQ 209
Query: 184 ----------PPSHALDLIRSKNFLLLMDSALE---GHFSNDEGTELVRLASRCLQSEAR 230
P + S + S H + G +L+ L
Sbjct: 210 LTRIFETLGTPTEEQWPDMCSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPC 269
Query: 231 ERPNAKSL 238
R A
Sbjct: 270 ARITATQA 277
|
| >d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} Length = 335 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase activated protein kinase 2, mapkap2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 80.5 bits (198), Expect = 2e-17
Identities = 34/211 (16%), Positives = 72/211 (34%), Gaps = 17/211 (8%)
Query: 42 LRSERLANLIGCCYEADER----LLVAEFMPNETLAKHLFHWETQPMKWAMRLRVALYLA 97
+ + ++ L+V E + L + Q + +
Sbjct: 62 SQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIG 121
Query: 98 QALEYCSSKGRALYHDLNAYRILFDK---DGNPRLSSFGLMKNSRDGKSYSTN---LAFT 151
+A++Y S A + D+ +L+ + +L+ FG K + S +T +
Sbjct: 122 EAIQYLHSINIA-HRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYV 180
Query: 152 PPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSN 211
PE + + ++S G ++ LL G PP ++ + + + F N
Sbjct: 181 APEVLGPEKYDKSCDMWSLGVIMYILLCGY--PPFYSNHGLAISPGMKTRIRMGQYEFPN 238
Query: 212 DEGT----ELVRLASRCLQSEARERPNAKSL 238
E + E+ L L++E +R
Sbjct: 239 PEWSEVSEEVKMLIRNLLKTEPTQRMTITEF 269
|
| >d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} Length = 345 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase Erk2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 80.3 bits (197), Expect = 3e-17
Identities = 34/240 (14%), Positives = 77/240 (32%), Gaps = 35/240 (14%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHW-ETQPMKWAMRLR 91
L E K + R E + + + ++ + L+ +TQ +
Sbjct: 54 LREIKILLRFRHENIIGINDIIRAPTIEQMKDVYLVTHLMGADLYKLLKTQHLSNDHICY 113
Query: 92 VALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYST----- 146
+ + L+Y S L+ DL +L + + ++ FGL + + ++
Sbjct: 114 FLYQILRGLKYIHSANV-LHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEY 172
Query: 147 --NLAFTPPEYMRTGRVTPESV-VYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDS 203
+ PE M + +S+ ++S G +L ++LS + I P + +L
Sbjct: 173 VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSP 232
Query: 204 ALE-------------------------GHFSNDEGTELVRLASRCLQSEARERPNAKSL 238
+ E + ++ + L + L +R +
Sbjct: 233 SQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQA 292
|
| >d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 79.1 bits (194), Expect = 5e-17
Identities = 37/244 (15%), Positives = 70/244 (28%), Gaps = 28/244 (11%)
Query: 35 EAKAVGNLRSERLANLIGCCYEADERL-LVAEFMPNETLAKHLFHWETQPMKWAMRLRVA 93
E+K ++ I C + +V E + LF++ ++ L +A
Sbjct: 52 ESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMELLGPSLE--DLFNFCSRKFSLKTVLLLA 109
Query: 94 LYLAQALEYCSSKGRALYHDLNAYRILF---DKDGNPRLSSFGLMKNSRDGKSYSTN--- 147
+ +EY SK ++ D+ L K + FGL K RD +++
Sbjct: 110 DQMISRIEYIHSKNF-IHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYR 168
Query: 148 --------LAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSK---- 195
+ + + S G +L+ G R K
Sbjct: 169 ENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERI 228
Query: 196 --NFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERPNAKSLVISLMSLQKEAEQVP 253
+ L + + E + C ++P+ L +L
Sbjct: 229 SEKKMSTPIEVLCKGYPS----EFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSY 284
Query: 254 SYVL 257
YV
Sbjct: 285 DYVF 288
|
| >d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} Length = 305 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK6 species: Human (Homo sapiens) [TaxId: 9606]
Score = 74.5 bits (182), Expect = 2e-15
Identities = 31/234 (13%), Positives = 66/234 (28%), Gaps = 29/234 (12%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLA----KHLFHWETQPMKWAM 88
+ + + + L C + + E + +L +
Sbjct: 58 VAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTET 117
Query: 89 RLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTN- 147
+ L + L++ S ++ DL IL G +L+ FGL + + ++
Sbjct: 118 IKDMMFQLLRGLDFLHSHR-VVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVV 176
Query: 148 --LAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHI---------------------P 184
L + PE + ++S G + ++ K +
Sbjct: 177 VTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGE 236
Query: 185 PSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERPNAKSL 238
D+ + + F D L +CL +R +A S
Sbjct: 237 EDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSA 290
|
| >d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 293 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
Score = 74.5 bits (182), Expect = 2e-15
Identities = 21/243 (8%), Positives = 53/243 (21%), Gaps = 20/243 (8%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQPMKWAMRLRV 92
+E + L + + ++ + + + L +
Sbjct: 48 RDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVIDLLGPS-LEDLLDLCGRKFSVKTVAMA 106
Query: 93 ALYLAQALEYCSSKGRALYHDLNAYRILFDK-----DGNPRLSSFGLMKNSRDGKSYSTN 147
A + ++ K +Y D+ L + + FG++K RD +
Sbjct: 107 AKQMLARVQSIHEKS-LVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPVTKQHI 165
Query: 148 -----------LAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKN 196
+ + + + G + + L G + K
Sbjct: 166 PYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKY 225
Query: 197 FLLLMDSALEGHFSNDEGT--ELVRLASRCLQSEARERPNAKSLVISLMSLQKEAEQVPS 254
+ G E + P+ L + +
Sbjct: 226 ERIGEKKQSTPLRELCAGFPEEFYKYMHYARNLAFDATPDYDYLQGLFSKVLERLNTTED 285
Query: 255 YVL 257
Sbjct: 286 ENF 288
|
| >d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} Length = 286 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK2 species: (Plasmodium falciparum) [TaxId: 5833]
Score = 73.4 bits (179), Expect = 3e-15
Identities = 34/234 (14%), Positives = 77/234 (32%), Gaps = 31/234 (13%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQPMKWAMRLRV 92
+ E + L+ + L + +LV E + + L ++
Sbjct: 48 IREISILKELKHSNIVKLYDVIHTKKRLVLVFEHLDQDLK--KLLDVCEGGLESVTAKSF 105
Query: 93 ALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLAFTP 152
L L + YC + L+ DL +L +++G +++ FGL + T+ T
Sbjct: 106 LLQLLNGIAYCHDRR-VLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEIVTL 164
Query: 153 -----PEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPS--------------------- 186
M + + + ++S G + ++++G + P
Sbjct: 165 WYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKN 224
Query: 187 --HALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERPNAKSL 238
+ +L + + + F + L S+ L+ + +R AK
Sbjct: 225 WPNVTELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQA 278
|
| >d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 337 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Pkb kinase (Akt-2) species: Human (Homo sapiens) [TaxId: 9606]
Score = 73.7 bits (180), Expect = 4e-15
Identities = 42/209 (20%), Positives = 76/209 (36%), Gaps = 13/209 (6%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQPMKWAMRLRV 92
+ E++ + N R L L D V E+ L HL + A
Sbjct: 53 VTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFY-- 110
Query: 93 ALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLAFTP 152
+ ALEY S+ +Y D+ ++ DKDG+ +++ FGL K + TP
Sbjct: 111 GAEIVSALEYLHSRDV-VYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTP 169
Query: 153 ----PEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGH 208
PE + + G ++ +++ G+ P + D R +L+ +
Sbjct: 170 EYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR--LPFYNQDHERLFELILMEEIRFPRT 227
Query: 209 FSNDEGTELVRLASRCLQSEARERPNAKS 237
S E L + L+ + ++R
Sbjct: 228 LSP----EAKSLLAGLLKKDPKQRLGGGP 252
|
| >d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} Length = 298 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 73.4 bits (179), Expect = 4e-15
Identities = 39/234 (16%), Positives = 83/234 (35%), Gaps = 30/234 (12%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQPMKWAMRLRV 92
+ E + L + L+ + ++ LV EF+ ++ L K + + +
Sbjct: 49 IREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSY 107
Query: 93 ALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLAFT- 151
L Q L +C S R L+ DL +L + +G +L+ FGL + T+ T
Sbjct: 108 LFQLLQGLAFCHSH-RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTL 166
Query: 152 ----PPEYMRTGRVTPESVVYSFGTMLLDLLSGKHI-PPSHALDLIRS--KNFLLLMDSA 204
P + + ++S G + ++++ + + P +D + + +
Sbjct: 167 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVV 226
Query: 205 LEGHFSNDE--------------------GTELVRLASRCLQSEARERPNAKSL 238
G S + + L S+ L + +R +AK+
Sbjct: 227 WPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAA 280
|
| >d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} Length = 346 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase p38-gamma species: Human (Homo sapiens) [TaxId: 9606]
Score = 72.9 bits (178), Expect = 7e-15
Identities = 32/235 (13%), Positives = 75/235 (31%), Gaps = 30/235 (12%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFH--WETQPMKWAMRL 90
E + + ++R E + L+ + +F + + +
Sbjct: 65 YRELRLLKHMRHENVIGLLDVFTPDETLDDFTDFYLVMPFMGTDLGKLMKHEKLGEDRIQ 124
Query: 91 RVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLAF 150
+ + + L Y + G + DL + ++D ++ FGL + + + +
Sbjct: 125 FLVYQMLKGLRYIHAAGII-HRDLKPGNLAVNEDCELKILDFGLARQADSEMTGYVVTRW 183
Query: 151 --TPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHI-------------------PPSHAL 189
P + R T ++S G ++ ++++GK + PP+ +
Sbjct: 184 YRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFV 243
Query: 190 DLIRSKNFLLLMDSALE------GHFSNDEGTELVRLASRCLQSEARERPNAKSL 238
++S M E + V L + L +A +R A
Sbjct: 244 QRLQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEA 298
|
| >d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} Length = 350 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Glycogen synthase kinase-3 beta (Gsk3b) species: Human (Homo sapiens) [TaxId: 9606]
Score = 73.3 bits (179), Expect = 7e-15
Identities = 44/240 (18%), Positives = 70/240 (29%), Gaps = 38/240 (15%)
Query: 35 EAKAVGNLRSERLANLIGCCYEADER------LLVAEFMPNETLAKHLFHWET-QPMKWA 87
E + + L + L Y + E+ LV +++P + Q +
Sbjct: 63 ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVI 122
Query: 88 MRLRVALYLAQALEYCSSKGRALYH-DLNAYRILFDKDGNP-RLSSFGLMKNSRDGKSYS 145
L ++L Y S G + H D+ +L D D +L FG K G+
Sbjct: 123 YVKLYMYQLFRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV 180
Query: 146 TNLAFT----PPEYMRTGRVTPESVVYSFGTMLLDLLSGKHI----PPSHALDLI----- 192
+ + P T V+S G +L +LL G+ I L I
Sbjct: 181 SYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLG 240
Query: 193 --------------RSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERPNAKSL 238
F + F E + L SR L+ R
Sbjct: 241 TPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEA 300
|
| >d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} Length = 292 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK5 species: Human (Homo sapiens) [TaxId: 9606]
Score = 69.6 bits (169), Expect = 7e-14
Identities = 33/235 (14%), Positives = 69/235 (29%), Gaps = 32/235 (13%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQPMKWAMRLRV 92
L E + L+ + + L + + LV EF + F + +
Sbjct: 49 LREICLLKELKHKNIVRLHDVLHSDKKLTLVFEFCDQDLK--KYFDSCNGDLDPEIVKSF 106
Query: 93 ALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLAFT- 151
L + L +C S+ L+ DL +L +++G +L++FGL + + T
Sbjct: 107 LFQLLKGLGFCHSRNV-LHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCYSAEVVTL 165
Query: 152 ----PPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIP----------------------- 184
P + ++S G + +L +
Sbjct: 166 WYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEE 225
Query: 185 -PSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERPNAKSL 238
L K + + + + L L+ +R +A+
Sbjct: 226 QWPSMTKLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEA 280
|
| >d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} Length = 350 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: cAMP-dependent PK, catalytic subunit species: Mouse (Mus musculus) [TaxId: 10090]
Score = 68.7 bits (167), Expect = 2e-13
Identities = 41/218 (18%), Positives = 77/218 (35%), Gaps = 12/218 (5%)
Query: 18 KSSVLESSDLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLF 77
K V++ + TLN E + + + L L + +V E++ + HL
Sbjct: 76 KQKVVKLKQIEHTLN--EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL- 132
Query: 78 HWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKN 137
A + EY S +Y DL +L D+ G +++ FG K
Sbjct: 133 -RRIGRFSEPHARFYAAQIVLTFEYLHSLD-LIYRDLKPENLLIDQQGYIQVTDFGFAKR 190
Query: 138 SRD-GKSYSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKN 196
+ + PE + + ++ G ++ ++ +G PP A I+
Sbjct: 191 VKGRTWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGY--PPFFADQPIQIYE 248
Query: 197 FLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERPN 234
++ HFS+ +L L LQ + +R
Sbjct: 249 KIVSGKVRFPSHFSS----DLKDLLRNLLQVDLTKRFG 282
|
| >d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} Length = 318 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell division protein kinase 9, CDK9 species: Human (Homo sapiens) [TaxId: 9606]
Score = 67.6 bits (164), Expect = 4e-13
Identities = 44/249 (17%), Positives = 77/249 (30%), Gaps = 46/249 (18%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADER--------LLVAEFMPNETLAKHLFHWETQPM 84
L E K + L+ E + NLI C LV +F ++ L
Sbjct: 57 LREIKILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLA--GLLSNVLVKF 114
Query: 85 KWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSY 144
+ RV L L Y L+ D+ A +L +DG +L+ FGL + K+
Sbjct: 115 TLSEIKRVMQMLLNGLYYIHRNK-ILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNS 173
Query: 145 STN--------LAFTPPEYMRTGR-VTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSK 195
N L + PPE + R P ++ G ++ ++ + I + +
Sbjct: 174 QPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLAL 233
Query: 196 NFLLLMDSALEGHFSNDEGT--------------------------ELVRLASRCLQSEA 229
L E + D + L + L +
Sbjct: 234 ISQLCGSITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDP 293
Query: 230 RERPNAKSL 238
+R ++
Sbjct: 294 AQRIDSDDA 302
|
| >d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Ribosomal protein S6 kinase alpha 5, Msk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 66.4 bits (161), Expect = 9e-13
Identities = 41/226 (18%), Positives = 77/226 (34%), Gaps = 14/226 (6%)
Query: 18 KSSVLESSDLGETLNLEEAKAVGNLRSER-LANLIGCCYEADERLLVAEFMPNETLAKHL 76
K+++++ + E E + + ++R L L + L+ +++ L HL
Sbjct: 62 KATIVQKAKTTEHT-RTERQVLEHIRQSPFLVTLHYAFQTETKLHLILDYINGGELFTHL 120
Query: 77 FHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMK 136
E + ALE+ G +Y D+ IL D +G+ L+ FGL K
Sbjct: 121 SQRERFTEHEVQI--YVGEIVLALEHLHKLG-IIYRDIKLENILLDSNGHVVLTDFGLSK 177
Query: 137 NSRDGKSYSTNLAFTPPEYMRT-------GRVTPESVVYSFGTMLLDLLSGKHIPPSHAL 189
++ EYM +S G ++ +LL+G P
Sbjct: 178 EFVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGA--SPFTVD 235
Query: 190 DLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERPNA 235
S+ + E + + L R L + ++R
Sbjct: 236 GEKNSQAEISRRILKSEPPYPQEMSALAKDLIQRLLMKDPKKRLGC 281
|
| >d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} Length = 348 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase p38 species: Human (Homo sapiens) [TaxId: 9606]
Score = 56.1 bits (134), Expect = 3e-09
Identities = 34/235 (14%), Positives = 77/235 (32%), Gaps = 30/235 (12%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFH--WETQPMKWAMRL 90
E + + +++ E + L+ A + L + + Q +
Sbjct: 65 YRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQ 124
Query: 91 RVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGL--MKNSRDGKSYSTNL 148
+ + + L+Y S + DL + ++D ++ FGL + +T
Sbjct: 125 FLIYQILRGLKYIHSADII-HRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRW 183
Query: 149 AFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKH-------------------IPPSHAL 189
P + ++S G ++ +LL+G+ P + L
Sbjct: 184 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELL 243
Query: 190 DLIRS---KNFLLLMDSALEGHFSN---DEGTELVRLASRCLQSEARERPNAKSL 238
I S +N++ + + +F+N V L + L ++ +R A
Sbjct: 244 KKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQA 298
|
| >d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} Length = 328 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase CK2, alpha subunit species: Rattus norvegicus [TaxId: 10116]
Score = 55.6 bits (133), Expect = 3e-09
Identities = 38/246 (15%), Positives = 75/246 (30%), Gaps = 46/246 (18%)
Query: 33 LEEAKAVGNLR-SERLANLIGCCYEADERL--LVAEFMPNETLAKHLFHWETQPMKWAMR 89
E K + NLR + L + R LV E + N + Q +
Sbjct: 77 KREIKILENLRGGPNIITLADIVKDPVSRTPALVFEHVNNTDFKQLY-----QTLTDYDI 131
Query: 90 LRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNP-RLSSFGLMKNSRDGKSYS--- 145
+ +AL+YC S G + D+ + ++ D + RL +GL + G+ Y+
Sbjct: 132 RFYMYEILKALDYCHSMGIM-HRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRV 190
Query: 146 -TNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKH---------------------- 182
+ P + ++S G ML ++ K
Sbjct: 191 ASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTE 250
Query: 183 ----------IPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARER 232
I + I ++ + + + E + + L+ + + R
Sbjct: 251 DLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSR 310
Query: 233 PNAKSL 238
A+
Sbjct: 311 LTAREA 316
|
| >d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 362 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Sky1p species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 55.8 bits (133), Expect = 4e-09
Identities = 33/260 (12%), Positives = 77/260 (29%), Gaps = 52/260 (20%)
Query: 31 LNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHW---ETQPMKWA 87
+N + ++ + + L+ + + L E + +
Sbjct: 66 VNDADNTKEDSMGANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLI 125
Query: 88 MRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNP------RLSSFGLMKNSRDG 141
+++ L L+Y + ++ D+ +L + +P +++ G +
Sbjct: 126 YVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDEH 185
Query: 142 KSYS-TNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHI----------------- 183
+ S + PE + + ++S ++ +L++G +
Sbjct: 186 YTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIA 245
Query: 184 --------PPSHALDLIRSKNFLLLMDSALEG-----------------HFSNDEGTELV 218
PS+ L + L FS DE E+
Sbjct: 246 QIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEIS 305
Query: 219 RLASRCLQSEARERPNAKSL 238
S LQ + R+R +A L
Sbjct: 306 DFLSPMLQLDPRKRADAGGL 325
|
| >d2c2la1 a.118.8.1 (A:24-224) STIP1 homology and U box-containing protein 1, STUB1 {Mouse (Mus musculus) [TaxId: 10090]} Length = 201 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: STIP1 homology and U box-containing protein 1, STUB1 species: Mouse (Mus musculus) [TaxId: 10090]
Score = 43.0 bits (100), Expect = 2e-05
Identities = 22/96 (22%), Positives = 38/96 (39%), Gaps = 1/96 (1%)
Query: 323 KKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQV 382
K+ G+ F + + A CY + I + Y R L YL P++AL D +A
Sbjct: 8 KEQGNRLFVGRKYPEAAACYGRAITRNPL-VAVYYTNRALCYLKMQQPEQALADCRRALE 66
Query: 383 VSPDWPTALYLQAACLFSLGMENDARETLKDGTNLE 418
+ A + C + ++A L+ +L
Sbjct: 67 LDGQSVKAHFFLGQCQLEMESYDEAIANLQRAYSLA 102
|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 424 | |||
| d1sm2a_ | 263 | Tyrosine-protein kinase Itk/Tsk {Human (Homo sapie | 100.0 | |
| d1opja_ | 287 | Abelsone tyrosine kinase (abl) {Mouse (Mus musculu | 100.0 | |
| d1uwha_ | 276 | B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} | 100.0 | |
| d1jpaa_ | 299 | ephb2 receptor tyrosine kinase {Mouse (Mus musculu | 100.0 | |
| d1qpca_ | 272 | Lymphocyte kinase (lck) {Human (Homo sapiens) [Tax | 100.0 | |
| d1u59a_ | 285 | Tyrosine-protein kinase ZAP-70 {Human (Homo sapien | 100.0 | |
| d2j4za1 | 263 | Aurora-related kinase 1 (aurora-2) {Human (Homo sa | 100.0 | |
| d1yhwa1 | 293 | pak1 {Human (Homo sapiens) [TaxId: 9606]} | 100.0 | |
| d1xbba_ | 277 | Tyrosine-protein kinase SYK {Human (Homo sapiens) | 100.0 | |
| d1mqba_ | 283 | epha2 receptor tyrosine kinase {Human (Homo sapien | 100.0 | |
| d1nvra_ | 271 | Cell cycle checkpoint kinase chk1 {Human (Homo sap | 100.0 | |
| d1u5ra_ | 309 | Serine/threonine protein kinase TAO2 {Rat (Rattus | 100.0 | |
| d1k2pa_ | 258 | Bruton's tyrosine kinase (Btk) {Human (Homo sapien | 100.0 | |
| d2java1 | 269 | Serine/threonine-protein kinase Nek2 {Human (Homo | 100.0 | |
| d2jfla1 | 288 | STE20-like serine/threonine-protein kinase, SLK {H | 100.0 | |
| d1t4ha_ | 270 | Protein kinase wnk1 {Human (Homo sapiens) [TaxId: | 100.0 | |
| d1rjba_ | 325 | Fl cytokine receptor {Human (Homo sapiens) [TaxId: | 100.0 | |
| d1byga_ | 262 | Carboxyl-terminal src kinase (csk) {Human (Homo sa | 100.0 | |
| d1fmka3 | 285 | c-src tyrosine kinase {Human (Homo sapiens) [TaxId | 100.0 | |
| d1a06a_ | 307 | Calmodulin-dependent protein kinase {Rat (Rattus n | 100.0 | |
| d1s9ja_ | 322 | Dual specificity mitogen-activated protein kinase | 100.0 | |
| d1uu3a_ | 288 | 3-phosphoinositide dependent protein kinase-1 Pdk1 | 100.0 | |
| d1mp8a_ | 273 | Focal adhesion kinase 1 (fak) {Human (Homo sapiens | 100.0 | |
| d1koba_ | 352 | Twitchin, kinase domain {California sea hare (Aply | 100.0 | |
| d1koaa2 | 350 | Twitchin, kinase domain {Caenorhabditis elegans, p | 100.0 | |
| d1r0pa_ | 311 | Hepatocyte growth factor receptor, c-MET {Human (H | 100.0 | |
| d1xkka_ | 317 | EGF receptor tyrosine kinase, Erbb-1 {Human (Homo | 100.0 | |
| d1fvra_ | 309 | Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} | 100.0 | |
| d1lufa_ | 301 | Musk tyrosine kinase {Rat (Rattus norvegicus) [Tax | 100.0 | |
| d1jksa_ | 293 | Death-associated protein kinase, Dap {Human (Homo | 100.0 | |
| d1fota_ | 316 | cAMP-dependent PK, catalytic subunit {Baker's yeas | 100.0 | |
| d1u46a_ | 273 | Activated CDC42 kinase 1, ACK1 {Human (Homo sapien | 100.0 | |
| d1o6la_ | 337 | Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9 | 100.0 | |
| d1ywna1 | 299 | Vascular endothelial growth factor receptor 2 (kdr | 100.0 | |
| d1o6ya_ | 277 | Mycobacterial protein kinase PknB, catalytic domai | 100.0 | |
| d1fgka_ | 299 | Fibroblast growth factor receptor 1 {Human (Homo s | 100.0 | |
| d1tkia_ | 321 | Titin, kinase domain {Human (Homo sapiens) [TaxId: | 100.0 | |
| d2ozaa1 | 335 | MAP kinase activated protein kinase 2, mapkap2 {Hu | 100.0 | |
| d1phka_ | 277 | gamma-subunit of glycogen phosphorylase kinase (Ph | 100.0 | |
| d1rdqe_ | 350 | cAMP-dependent PK, catalytic subunit {Mouse (Mus m | 100.0 | |
| d1omwa3 | 364 | G-protein coupled receptor kinase 2 {Cow (Bos taur | 100.0 | |
| d1p4oa_ | 308 | Insulin-like growth factor 1 receptor {Human (Homo | 100.0 | |
| d1t46a_ | 311 | c-KIT receptor {Human (Homo sapiens) [TaxId: 9606] | 100.0 | |
| d1vjya_ | 303 | Type I TGF-beta receptor R4 {Human (Homo sapiens) | 100.0 | |
| d1xjda_ | 320 | Protein kinase C, theta type {Human (Homo sapiens) | 100.0 | |
| d1ua2a_ | 299 | Cell division protein kinase 7, CDK7 {Human (Homo | 100.0 | |
| d1gz8a_ | 298 | Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [T | 100.0 | |
| d1xwsa_ | 273 | Proto-oncogene serine/threonine-protein kinase Pim | 100.0 | |
| d1ob3a_ | 286 | Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) | 100.0 | |
| d1blxa_ | 305 | Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [T | 100.0 | |
| d1cm8a_ | 346 | MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: | 100.0 | |
| d1csna_ | 293 | Casein kinase-1, CK1 {Fission yeast (Schizosacchar | 100.0 | |
| d1pmea_ | 345 | MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606 | 100.0 | |
| d1ckia_ | 299 | Casein kinase-1, CK1 {Rat (Rattus norvegicus) [Tax | 100.0 | |
| d3blha1 | 318 | Cell division protein kinase 9, CDK9 {Human (Homo | 100.0 | |
| d1q5ka_ | 350 | Glycogen synthase kinase-3 beta (Gsk3b) {Human (Ho | 100.0 | |
| d1vzoa_ | 322 | Ribosomal protein S6 kinase alpha 5, Msk1 {Human ( | 100.0 | |
| d3bqca1 | 328 | Protein kinase CK2, alpha subunit {Rattus norvegic | 100.0 | |
| d1unla_ | 292 | Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [T | 100.0 | |
| d2b1pa1 | 355 | c-jun N-terminal kinase (jnk3s) {Human (Homo sapie | 100.0 | |
| d2gfsa1 | 348 | MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606] | 100.0 | |
| d1q8ya_ | 362 | Sky1p {Baker's yeast (Saccharomyces cerevisiae) [T | 100.0 | |
| d1zara2 | 191 | Rio2 serine protein kinase C-terminal domain {Arch | 99.85 | |
| d1elwa_ | 117 | Hop {Human (Homo sapiens) [TaxId: 9606]} | 99.82 | |
| d2c2la1 | 201 | STIP1 homology and U box-containing protein 1, STU | 99.8 | |
| d1a17a_ | 159 | Protein phosphatase 5 {Human (Homo sapiens) [TaxId | 99.79 | |
| d2fbna1 | 153 | Putative 70 kda peptidylprolyl isomerase PFL2275c | 99.75 | |
| d1p5qa1 | 170 | FKBP52 (FKBP4), C-terminal domain {Human (Homo sap | 99.73 | |
| d1kt1a1 | 168 | FKBP51, C-terminal domain {Monkey (Saimiri bolivie | 99.71 | |
| d1elra_ | 128 | Hop {Human (Homo sapiens) [TaxId: 9606]} | 99.69 | |
| d1ihga1 | 169 | Cyclophilin 40 {Cow (Bos taurus) [TaxId: 9913]} | 99.68 | |
| d1hxia_ | 112 | Peroxin pex5 (peroxisomal targeting signal 1 (PTS1 | 99.66 | |
| d1xnfa_ | 259 | Lipoprotein NlpI {Escherichia coli [TaxId: 562]} | 99.63 | |
| d1hh8a_ | 192 | Neutrophil cytosolic factor 2 (NCF-2, p67-phox) {H | 99.63 | |
| d2hr2a1 | 156 | Hypothetical protein CT2138 {Chlorobium tepidum [T | 99.59 | |
| d1nzna_ | 122 | Mitochondria fission protein Fis1 {Human (Homo sap | 99.59 | |
| d1hh8a_ | 192 | Neutrophil cytosolic factor 2 (NCF-2, p67-phox) {H | 99.53 | |
| d1zu2a1 | 145 | Mitochondrial import receptor subunit tom20-3 {Tha | 99.52 | |
| d1fcha_ | 323 | Peroxin pex5 (peroxisomal targeting signal 1 (PTS1 | 99.5 | |
| d2h6fa1 | 315 | Protein farnesyltransferase alpha-subunit {Human ( | 99.44 | |
| d2h6fa1 | 315 | Protein farnesyltransferase alpha-subunit {Human ( | 99.44 | |
| d1fcha_ | 323 | Peroxin pex5 (peroxisomal targeting signal 1 (PTS1 | 99.43 | |
| d1tjca_ | 95 | Prolyl 4-hydroxylase alpha-1 subunit, P4HA1 {Human | 99.4 | |
| d1w3ba_ | 388 | O-GlcNAc transferase p110 subunit, OGT {Human (Hom | 99.38 | |
| d1w3ba_ | 388 | O-GlcNAc transferase p110 subunit, OGT {Human (Hom | 99.35 | |
| d2ff4a2 | 179 | Probable regulatory protein EmbR, middle domain {M | 99.27 | |
| d1xnfa_ | 259 | Lipoprotein NlpI {Escherichia coli [TaxId: 562]} | 99.23 | |
| d1ihga1 | 169 | Cyclophilin 40 {Cow (Bos taurus) [TaxId: 9913]} | 99.21 | |
| d1elwa_ | 117 | Hop {Human (Homo sapiens) [TaxId: 9606]} | 99.21 | |
| d1p5qa1 | 170 | FKBP52 (FKBP4), C-terminal domain {Human (Homo sap | 99.18 | |
| d1kt1a1 | 168 | FKBP51, C-terminal domain {Monkey (Saimiri bolivie | 99.15 | |
| d1a17a_ | 159 | Protein phosphatase 5 {Human (Homo sapiens) [TaxId | 99.1 | |
| d2fbna1 | 153 | Putative 70 kda peptidylprolyl isomerase PFL2275c | 99.1 | |
| d1elra_ | 128 | Hop {Human (Homo sapiens) [TaxId: 9606]} | 99.09 | |
| d1hxia_ | 112 | Peroxin pex5 (peroxisomal targeting signal 1 (PTS1 | 99.06 | |
| d2c2la1 | 201 | STIP1 homology and U box-containing protein 1, STU | 99.05 | |
| d1tjca_ | 95 | Prolyl 4-hydroxylase alpha-1 subunit, P4HA1 {Human | 99.05 | |
| d1zu2a1 | 145 | Mitochondrial import receptor subunit tom20-3 {Tha | 98.91 | |
| d1nzna_ | 122 | Mitochondria fission protein Fis1 {Human (Homo sap | 98.91 | |
| d1zbpa1 | 264 | Hypothetical protein VPA1032 {Vibrio parahaemolyti | 98.85 | |
| d1qqea_ | 290 | Vesicular transport protein sec17 {Baker's yeast ( | 98.83 | |
| d1ya0a1 | 497 | SMG-7 {Human (Homo sapiens) [TaxId: 9606]} | 98.81 | |
| d1dcea1 | 334 | Rab geranylgeranyltransferase alpha-subunit, N-ter | 98.76 | |
| d1dcea1 | 334 | Rab geranylgeranyltransferase alpha-subunit, N-ter | 98.71 | |
| d1qqea_ | 290 | Vesicular transport protein sec17 {Baker's yeast ( | 98.7 | |
| d1hz4a_ | 366 | Transcription factor MalT domain III {Escherichia | 98.7 | |
| d1ya0a1 | 497 | SMG-7 {Human (Homo sapiens) [TaxId: 9606]} | 98.5 | |
| d1hz4a_ | 366 | Transcription factor MalT domain III {Escherichia | 98.47 | |
| d2hr2a1 | 156 | Hypothetical protein CT2138 {Chlorobium tepidum [T | 98.47 | |
| d2pqrb1 | 124 | Mitochondria fission protein Fis1 {Baker's yeast ( | 98.39 | |
| d1j7la_ | 263 | Type IIIa 3',5"-aminoglycoside phosphotransferase | 98.32 | |
| d2onda1 | 308 | Cleavage stimulation factor 77 kDa subunit CSTF3 { | 98.24 | |
| d2pqrb1 | 124 | Mitochondria fission protein Fis1 {Baker's yeast ( | 98.2 | |
| d1zbpa1 | 264 | Hypothetical protein VPA1032 {Vibrio parahaemolyti | 98.13 | |
| d2onda1 | 308 | Cleavage stimulation factor 77 kDa subunit CSTF3 { | 98.1 | |
| d2ff4a2 | 179 | Probable regulatory protein EmbR, middle domain {M | 97.93 | |
| d1ouva_ | 265 | Cysteine rich protein C (HcpC) {Helicobacter pylor | 97.85 | |
| d1klxa_ | 133 | Cysteine rich protein B (HcpB) {Helicobacter pylor | 97.78 | |
| d1nd4a_ | 255 | Aminoglycoside 3'-phosphotransferase IIa (Kanamyci | 97.64 | |
| d1ouva_ | 265 | Cysteine rich protein C (HcpC) {Helicobacter pylor | 97.43 | |
| d1klxa_ | 133 | Cysteine rich protein B (HcpB) {Helicobacter pylor | 97.21 | |
| d2pula1 | 392 | Methylthioribose kinase MtnK {Bacillus subtilis [T | 96.9 | |
| d1zyla1 | 325 | RdoA {Escherichia coli [TaxId: 562]} | 95.37 | |
| d1nw1a_ | 395 | Choline kinase {Caenorhabditis elegans [TaxId: 623 | 94.91 | |
| d2ppqa1 | 316 | Homoserine kinase ThrB {Agrobacterium tumefaciens | 92.71 | |
| d1wfda_ | 93 | Hypothetical protein 1500032H18Rik {Mouse (Mus mus | 84.22 | |
| d2crba1 | 83 | Nuclear receptor binding factor 2, NRBF2, N-termin | 83.81 | |
| d2crba1 | 83 | Nuclear receptor binding factor 2, NRBF2, N-termin | 82.41 |
| >d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase Itk/Tsk species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=9.1e-55 Score=393.66 Aligned_cols=241 Identities=20% Similarity=0.302 Sum_probs=199.7
Q ss_pred CCCCcccceeeee-cceecccccCCCchhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHhHhccC
Q 014478 1 MGGRCSKFSICWF-HCHLKSSVLESSDLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHW 79 (424)
Q Consensus 1 ~G~~g~v~~~~~~-~~~v~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~ 79 (424)
-|+||.||++.+. +..|++|++.......+.|.+|++++++++|||||+++|+|..++..++||||+++|+|.+++..
T Consensus 15 ~G~fg~Vy~~~~~~~~~vAvK~i~~~~~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~lv~E~~~~g~L~~~l~~- 93 (263)
T d1sm2a_ 15 SGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRT- 93 (263)
T ss_dssp CCSSCCEEEEEETTTEEEEEEECCSSSSCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHT-
T ss_pred eCCCeEEEEEEECCCCEEEEEEECCCcCcHHHHHHHHHHHHhcCCCCcccccceeccCCceEEEEEecCCCcHHHHhhc-
Confidence 3999999999984 56699999987777788999999999999999999999999999999999999999999999865
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCC-----CccccCccCCCcc
Q 014478 80 ETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG-----KSYSTNLAFTPPE 154 (424)
Q Consensus 80 ~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~-----~~~~gt~~y~aPE 154 (424)
....+++..++.++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++..... ....||+.|||||
T Consensus 94 ~~~~~~~~~~~~i~~qia~gl~~lH~~~-iiHrDlKp~Nill~~~~~~Kl~DFGla~~~~~~~~~~~~~~~gt~~y~aPE 172 (263)
T d1sm2a_ 94 QRGLFAAETLLGMCLDVCEGMAYLEEAC-VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPE 172 (263)
T ss_dssp TTTCCCHHHHHHHHHHHHHHHHHHHHTT-CCCTTCSGGGEEECGGGCEEECSCC------------------CTTSCCHH
T ss_pred cccCCCHHHHHHHHHHHHHHHHhhhccc-eeecccchhheeecCCCCeEecccchheeccCCCceeecceecCcccCChH
Confidence 4567899999999999999999999999 999999999999999999999999999865432 2346789999999
Q ss_pred ccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHHHHHHHHHhcccCcCCCCC
Q 014478 155 YMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERPN 234 (424)
Q Consensus 155 ~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps 234 (424)
++.+..++.++|||||||++|||+|+..|+.... ........+........|..+++++.+++.+||+.||++|||
T Consensus 173 ~l~~~~~~~k~DVwS~Gvil~el~t~~~~~~~~~----~~~~~~~~i~~~~~~~~p~~~~~~l~~li~~cl~~~p~~Rps 248 (263)
T d1sm2a_ 173 VFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENR----SNSEVVEDISTGFRLYKPRLASTHVYQIMNHCWKERPEDRPA 248 (263)
T ss_dssp HHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSC----CHHHHHHHHHHTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCC
T ss_pred HhcCCCCCchhhhcchHHHHHHHHHCCCCCCCCC----CHHHHHHHHHhcCCCCCccccCHHHHHHHHHHccCCHhHCcC
Confidence 9999999999999999999999999654544321 112222233334455567778899999999999999999999
Q ss_pred HHHHHHHHHHHhh
Q 014478 235 AKSLVISLMSLQK 247 (424)
Q Consensus 235 ~~~~~~~l~~~~~ 247 (424)
+++++++|+++.+
T Consensus 249 ~~~il~~L~~i~e 261 (263)
T d1sm2a_ 249 FSRLLRQLAEIAE 261 (263)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh
Confidence 9999999998865
|
| >d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Abelsone tyrosine kinase (abl) species: Mouse (Mus musculus) [TaxId: 10090]
Probab=100.00 E-value=6.3e-55 Score=399.18 Aligned_cols=242 Identities=19% Similarity=0.303 Sum_probs=210.9
Q ss_pred CCCcccceeee--ecceecccccCCCchhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHhHhccC
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESSDLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHW 79 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~ 79 (424)
||||.||++.+ .+..||+|++..+....+.|.+|+++|++++|||||+++|+|.+++..+|||||+++|+|.+++...
T Consensus 28 G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~iv~E~~~~g~l~~~l~~~ 107 (287)
T d1opja_ 28 GQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLREC 107 (287)
T ss_dssp TTTSSEEEEEEGGGTEEEEEEECCTTCSCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHHS
T ss_pred CCCeEEEEEEECCCCeEEEEEEECCccchHHHHHHHHHHHHhCCCCCEecCCccEeeCCeeEEEeecccCcchHHHhhhc
Confidence 99999999998 4667999998877777889999999999999999999999999999999999999999999999765
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCCC-----ccccCccCCCcc
Q 014478 80 ETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGK-----SYSTNLAFTPPE 154 (424)
Q Consensus 80 ~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~~-----~~~gt~~y~aPE 154 (424)
....+++..++.++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++...... ...||+.|||||
T Consensus 108 ~~~~~~~~~~~~i~~qi~~gL~yLH~~~-iiHrDlKp~NILl~~~~~~Kl~DFG~a~~~~~~~~~~~~~~~g~~~y~aPE 186 (287)
T d1opja_ 108 NRQEVSAVVLLYMATQISSAMEYLEKKN-FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPE 186 (287)
T ss_dssp CTTTSCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEECGGGCEEECCCCCTTTCCSSSSEEETTEEECGGGCCHH
T ss_pred cccchHHHHHHHHHHHHHHHHHHHHHCC-cccCccccCeEEECCCCcEEEccccceeecCCCCceeeccccccccccChH
Confidence 6678999999999999999999999999 9999999999999999999999999998765432 224688999999
Q ss_pred ccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHHHHHHHHHhcccCcCCCCC
Q 014478 155 YMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERPN 234 (424)
Q Consensus 155 ~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps 234 (424)
++.++.++.++|||||||++|||++|..|+... .........+........+..+++++.+||.+||+.||++|||
T Consensus 187 ~~~~~~~~~k~DiwS~Gv~l~ell~~~~p~~~~----~~~~~~~~~i~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps 262 (287)
T d1opja_ 187 SLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPG----IDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPS 262 (287)
T ss_dssp HHHHCCCSHHHHHHHHHHHHHHHHTTSCCSSTT----CCHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCC
T ss_pred HHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCc----chHHHHHHHHhcCCCCCCCccchHHHHHHHHHHcCCCHhHCcC
Confidence 999999999999999999999999987665443 1122233344445556677788999999999999999999999
Q ss_pred HHHHHHHHHHHhhh
Q 014478 235 AKSLVISLMSLQKE 248 (424)
Q Consensus 235 ~~~~~~~l~~~~~~ 248 (424)
++++++.|+.+.++
T Consensus 263 ~~ei~~~L~~~~~~ 276 (287)
T d1opja_ 263 FAEIHQAFETMFQE 276 (287)
T ss_dssp HHHHHHHHHHTTSS
T ss_pred HHHHHHHHHHHHHh
Confidence 99999999877543
|
| >d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: B-Raf kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.1e-54 Score=393.11 Aligned_cols=243 Identities=18% Similarity=0.235 Sum_probs=195.9
Q ss_pred CCCcccceeeeecceecccccCCC---chhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHhHhcc
Q 014478 2 GGRCSKFSICWFHCHLKSSVLESS---DLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFH 78 (424)
Q Consensus 2 G~~g~v~~~~~~~~~v~~~~~~~~---~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~ 78 (424)
||||.||++.+.+ .|++|++... ....+.|.+|+++|++++|||||+++|++.. +..+||||||+||+|.+++..
T Consensus 19 G~fg~Vy~~~~~~-~vAvK~~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~~~~~~~~-~~~~lv~Ey~~~g~L~~~l~~ 96 (276)
T d1uwha_ 19 GSFGTVYKGKWHG-DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTA-PQLAIVTQWCEGSSLYHHLHI 96 (276)
T ss_dssp CSSCEEEEEESSS-EEEEEECCCSSCCTTHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSCEEEEECCCEEEHHHHHHT
T ss_pred CCCcEEEEEEECC-EEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeeeEEEec-cEEEEEEecCCCCCHHHHHhh
Confidence 9999999998755 5888887533 3456789999999999999999999999865 468999999999999999965
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCC------CccccCccCCC
Q 014478 79 WETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG------KSYSTNLAFTP 152 (424)
Q Consensus 79 ~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~------~~~~gt~~y~a 152 (424)
...++++.+++.++.||+.||.|||+++ ||||||||+|||++.++.+||+|||+++..... ....||+.|||
T Consensus 97 -~~~~~~~~~~~~i~~qi~~gl~yLH~~~-ivHrDlKp~NiLl~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~A 174 (276)
T d1uwha_ 97 -IETKFEMIKLIDIARQTAQGMDYLHAKS-IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMA 174 (276)
T ss_dssp -SCCCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEEETTSSEEECCCCCSCC------------CCCCGGGCC
T ss_pred -ccCCCCHHHHHHHHHHHHHHHHHHhcCC-EeccccCHHHEEEcCCCCEEEccccceeeccccCCcccccccccCcccCC
Confidence 3467999999999999999999999999 999999999999999999999999999765432 24568999999
Q ss_pred cccccc---CCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHHHHHHHHHhcccCc
Q 014478 153 PEYMRT---GRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEA 229 (424)
Q Consensus 153 PE~~~~---~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp 229 (424)
||++.+ +.++.++|||||||++|||+||+.||.........................+..+++++.+|+.+||+.||
T Consensus 175 PE~l~~~~~~~~~~~sDiwS~Gv~l~el~tg~~Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~l~~li~~cl~~dp 254 (276)
T d1uwha_ 175 PEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKR 254 (276)
T ss_dssp HHHHTTCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHHTSCCCCGGGSCTTCCHHHHHHHHHHTCSSG
T ss_pred HHHHhcccCCCCCchhhhhhhHHHHHHHHHCCCCCCCCChHHHHHHHHhcCCCCCcchhccccchHHHHHHHHHHcCCCH
Confidence 999874 35889999999999999999999888753211111111111111111123455678899999999999999
Q ss_pred CCCCCHHHHHHHHHHHhhh
Q 014478 230 RERPNAKSLVISLMSLQKE 248 (424)
Q Consensus 230 ~~Rps~~~~~~~l~~~~~~ 248 (424)
++|||+++++++|+.+.+.
T Consensus 255 ~~RPt~~~il~~Le~l~~~ 273 (276)
T d1uwha_ 255 DERPLFPQILASIELLARS 273 (276)
T ss_dssp GGSCCHHHHHHHHHHHHHT
T ss_pred hHCcCHHHHHHHHHHHHHc
Confidence 9999999999999988764
|
| >d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: ephb2 receptor tyrosine kinase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=100.00 E-value=5.1e-54 Score=395.43 Aligned_cols=240 Identities=20% Similarity=0.252 Sum_probs=195.8
Q ss_pred CCCcccceeeeec-----ceecccccCC--CchhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHh
Q 014478 2 GGRCSKFSICWFH-----CHLKSSVLES--SDLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAK 74 (424)
Q Consensus 2 G~~g~v~~~~~~~-----~~v~~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~ 74 (424)
||||.||++.+.. ..|++|++.. .....+.|.+|+++|++++|||||+++|+|..++..++|||||++|+|.+
T Consensus 37 G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~iv~Ey~~~g~L~~ 116 (299)
T d1jpaa_ 37 GEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDS 116 (299)
T ss_dssp CSSSEEEEEEECC---CCEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEEEEECCTTEEHHH
T ss_pred CCCeEEEEEEEeCCCCEEEEEEEEEECcccCHHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCEEEEEEEecCCCccee
Confidence 9999999998832 2367776654 33446789999999999999999999999999999999999999999999
Q ss_pred HhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCCC---------ccc
Q 014478 75 HLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGK---------SYS 145 (424)
Q Consensus 75 ~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~~---------~~~ 145 (424)
++.. ....+++.+++.++.||+.||.|||+++ |+||||||+|||++.++++||+|||+++...... ...
T Consensus 117 ~~~~-~~~~l~~~~~~~i~~qia~gl~yLH~~~-iiHrDlKp~NILl~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~~~~ 194 (299)
T d1jpaa_ 117 FLRQ-NDGQFTVIQLVGMLRGIAAGMKYLADMN-YVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGK 194 (299)
T ss_dssp HHHT-TTTCSCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEECTTCCEEECCC----------------------
T ss_pred eecc-ccCCCCHHHHHHHHHHHHHHHHHHhhCC-CccCccccceEEECCCCcEEECCcccceEccCCCCcceeeeccccc
Confidence 8865 3557999999999999999999999999 9999999999999999999999999998654321 134
Q ss_pred cCccCCCccccccCCCCCCcceehhHHHHHHHhh-CCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHHHHHHHHHh
Q 014478 146 TNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRC 224 (424)
Q Consensus 146 gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c 224 (424)
||+.|||||.+.++.++.++|||||||++|||+| |..||..... ......+........+..+++++.+|+.+|
T Consensus 195 ~t~~y~aPE~~~~~~~~~~sDvwS~Gvvl~el~t~g~~Pf~~~~~-----~~~~~~i~~~~~~~~~~~~~~~l~~li~~c 269 (299)
T d1jpaa_ 195 IPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTN-----QDVINAIEQDYRLPPPMDCPSALHQLMLDC 269 (299)
T ss_dssp -CGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCH-----HHHHHHHHTTCCCCCCTTCCHHHHHHHHHH
T ss_pred CCccccCHHHHhcCCCCcccccccchHHHHHHHhCCCCCCCCCCH-----HHHHHHHHcCCCCCCCccchHHHHHHHHHH
Confidence 6889999999999999999999999999999998 7877765422 222233334445556777899999999999
Q ss_pred cccCcCCCCCHHHHHHHHHHHhhh
Q 014478 225 LQSEARERPNAKSLVISLMSLQKE 248 (424)
Q Consensus 225 l~~dp~~Rps~~~~~~~l~~~~~~ 248 (424)
|+.||++|||+.+|++.|+++.+.
T Consensus 270 l~~~P~~RPs~~ei~~~L~~~l~~ 293 (299)
T d1jpaa_ 270 WQKDRNHRPKFGQIVNTLDKMIRN 293 (299)
T ss_dssp TCSSTTTSCCHHHHHHHHHHHHHS
T ss_pred cCCCHhHCcCHHHHHHHHHHHhcC
Confidence 999999999999999999988765
|
| >d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Lymphocyte kinase (lck) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4.8e-54 Score=390.62 Aligned_cols=240 Identities=20% Similarity=0.296 Sum_probs=204.5
Q ss_pred CCCcccceeeee-cceecccccCCCchhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHhHhccCC
Q 014478 2 GGRCSKFSICWF-HCHLKSSVLESSDLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWE 80 (424)
Q Consensus 2 G~~g~v~~~~~~-~~~v~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~ 80 (424)
||||.||++.+. +..||+|++.......+.|.+|+++|++++|||||+++|++.+ +..++||||+++|+|.+++....
T Consensus 24 G~fg~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~-~~~~iv~Ey~~~g~L~~~~~~~~ 102 (272)
T d1qpca_ 24 GQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTPS 102 (272)
T ss_dssp ETTEEEEEEEETTTEEEEEEEECTTSSCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEEECCTTCBHHHHTTSHH
T ss_pred CCCcEEEEEEECCCCEEEEEEEccCcCCHHHHHHHHHHHHhCCCCCEeEEEeeecc-CCeEEEEEeCCCCcHHHHHhhcC
Confidence 899999999985 4679999998777778899999999999999999999998865 56799999999999999886544
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCC-----CccccCccCCCccc
Q 014478 81 TQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG-----KSYSTNLAFTPPEY 155 (424)
Q Consensus 81 ~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~-----~~~~gt~~y~aPE~ 155 (424)
..++++.++++++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++..... ....||+.|||||+
T Consensus 103 ~~~l~~~~~~~i~~qi~~gl~~lH~~~-ivHrDiKp~NIll~~~~~~Kl~DFGla~~~~~~~~~~~~~~~gt~~y~APE~ 181 (272)
T d1qpca_ 103 GIKLTINKLLDMAAQIAEGMAFIEERN-YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEA 181 (272)
T ss_dssp HHTCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEECTTSCEEECCCTTCEECSSSCEECCTTCCCCTTTSCHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHhCC-cccCccchhheeeecccceeeccccceEEccCCccccccccCCcccccChHH
Confidence 457999999999999999999999999 999999999999999999999999999876543 23467899999999
Q ss_pred cccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHHHHHHHHHhcccCcCCCCCH
Q 014478 156 MRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERPNA 235 (424)
Q Consensus 156 ~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~ 235 (424)
+.++.++.++|||||||++|||+||..|+.... ........+........|..+++++.+|+.+||+.||++|||+
T Consensus 182 ~~~~~~~~~sDvwS~Gvvl~ellt~~~~~~~~~----~~~~~~~~i~~~~~~~~p~~~~~~l~~li~~cl~~~P~~Rpt~ 257 (272)
T d1qpca_ 182 INYGTFTIKSDVWSFGILLTEIVTHGRIPYPGM----TNPEVIQNLERGYRMVRPDNCPEELYQLMRLCWKERPEDRPTF 257 (272)
T ss_dssp HHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTC----CHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCH
T ss_pred HhCCCCCchhhhhhhHHHHHHHHhCCCCCCCCC----CHHHHHHHHHhcCCCCCcccChHHHHHHHHHHcCCCHhHCcCH
Confidence 998899999999999999999999765554321 1112223333444555677788999999999999999999999
Q ss_pred HHHHHHHHHHhh
Q 014478 236 KSLVISLMSLQK 247 (424)
Q Consensus 236 ~~~~~~l~~~~~ 247 (424)
++|++.|+....
T Consensus 258 ~ei~~~L~~~ft 269 (272)
T d1qpca_ 258 DYLRSVLEDFFT 269 (272)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHhhhhhh
Confidence 999999987654
|
| >d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase ZAP-70 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.7e-53 Score=387.40 Aligned_cols=239 Identities=19% Similarity=0.247 Sum_probs=202.5
Q ss_pred CCCcccceeeee----cceecccccCCC--chhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHhH
Q 014478 2 GGRCSKFSICWF----HCHLKSSVLESS--DLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKH 75 (424)
Q Consensus 2 G~~g~v~~~~~~----~~~v~~~~~~~~--~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~ 75 (424)
||||.||++.+. +..||+|++... ....+.|.+|+++|++++|||||+++|+|.. +..+|||||++||+|.++
T Consensus 20 G~fg~Vy~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~g~~~~-~~~~lvmE~~~~g~L~~~ 98 (285)
T d1u59a_ 20 GNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALMLVMEMAGGGPLHKF 98 (285)
T ss_dssp CTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEES-SSEEEEEECCTTEEHHHH
T ss_pred ccCeEEEEEEEecCCCcEEEEEEEEChhcCHHHHHHHHHHHHHHHhCCCCCEeeEeeeecc-CeEEEEEEeCCCCcHHHH
Confidence 999999999873 235788887543 3446789999999999999999999999875 468999999999999999
Q ss_pred hccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCC-------CccccCc
Q 014478 76 LFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG-------KSYSTNL 148 (424)
Q Consensus 76 l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~-------~~~~gt~ 148 (424)
+.. .+..+++.++++++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++..... ....||+
T Consensus 99 l~~-~~~~l~~~~~~~i~~qi~~gL~ylH~~~-iiHrDlKp~Nill~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~~gt~ 176 (285)
T d1u59a_ 99 LVG-KREEIPVSNVAELLHQVSMGMKYLEEKN-FVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPL 176 (285)
T ss_dssp HTT-CTTTSCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEEEETTEEEECCCTTCEECTTCSCEECCCCSSCCCG
T ss_pred hhc-cccCCCHHHHHHHHHHHHHHHHHHHhCC-eecCcCchhheeeccCCceeeccchhhhcccccccccccccccccCc
Confidence 854 3567999999999999999999999999 999999999999999999999999999876432 2345789
Q ss_pred cCCCccccccCCCCCCcceehhHHHHHHHhh-CCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHHHHHHHHHhccc
Q 014478 149 AFTPPEYMRTGRVTPESVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQS 227 (424)
Q Consensus 149 ~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~ 227 (424)
.|||||++.++.++.++|||||||++|||+| |..||..... ......+....+...|..+|+++.+||.+||+.
T Consensus 177 ~y~aPE~~~~~~~~~ksDVwS~Gv~l~E~lt~G~~Pf~~~~~-----~~~~~~i~~~~~~~~p~~~~~~l~~li~~cl~~ 251 (285)
T d1u59a_ 177 KWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKG-----PEVMAFIEQGKRMECPPECPPELYALMSDCWIY 251 (285)
T ss_dssp GGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCT-----HHHHHHHHTTCCCCCCTTCCHHHHHHHHHTTCS
T ss_pred cccChHHHhCCCCCccchhhcchHHHHHHHhCCCCCCCCCCH-----HHHHHHHHcCCCCCCCCcCCHHHHHHHHHHcCC
Confidence 9999999999999999999999999999998 8888765321 222333444455567788999999999999999
Q ss_pred CcCCCCCHHHHHHHHHHHhhh
Q 014478 228 EARERPNAKSLVISLMSLQKE 248 (424)
Q Consensus 228 dp~~Rps~~~~~~~l~~~~~~ 248 (424)
||++|||+.+|++.|+.....
T Consensus 252 ~p~~RPs~~~i~~~L~~~~~~ 272 (285)
T d1u59a_ 252 KWEDRPDFLTVEQRMRACYYS 272 (285)
T ss_dssp SGGGSCCHHHHHHHHHHHHHH
T ss_pred CHhHCcCHHHHHHHHHHHHHH
Confidence 999999999999998876543
|
| >d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Aurora-related kinase 1 (aurora-2) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.5e-53 Score=383.09 Aligned_cols=231 Identities=20% Similarity=0.258 Sum_probs=198.5
Q ss_pred CCCcccceeee--ecceecccccCCCc----hhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHhH
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESSD----LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKH 75 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~~----~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~ 75 (424)
|+||.||.+.+ .+..+++|++.... .....+.+|++++++++||||+++++++.+++..+||||||+||+|.++
T Consensus 17 G~fg~Vy~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~ivmEy~~~g~L~~~ 96 (263)
T d2j4za1 17 GKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRE 96 (263)
T ss_dssp CSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEECCTTCBHHHH
T ss_pred CCCcEEEEEEECCCCcEEEEEEEchHHccChHHHHHHHHHHHHHHhcCCCCCCeEEEEEEECCEEEEEEeecCCCcHHHH
Confidence 89999999988 46678888775332 2356788999999999999999999999999999999999999999999
Q ss_pred hccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCC--CccccCccCCCc
Q 014478 76 LFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG--KSYSTNLAFTPP 153 (424)
Q Consensus 76 l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~--~~~~gt~~y~aP 153 (424)
+.. ...+++.++..++.||+.||.|||+++ ||||||||+|||++.++.+||+|||+++..... ....||+.||||
T Consensus 97 l~~--~~~l~e~~~~~i~~qi~~al~~lH~~~-ivHrDiKp~Nill~~~~~~kl~DFG~a~~~~~~~~~~~~Gt~~Y~AP 173 (263)
T d2j4za1 97 LQK--LSKFDEQRTATYITELANALSYCHSKR-VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPP 173 (263)
T ss_dssp HHH--HSSCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEECTTSCEEECCCCSCSCCCCCCCEETTEEGGGCCH
T ss_pred Hhh--cCCCCHHHHHHHHHHHHHHHHHHHHCC-eeeeeeccccceecCCCCEeecccceeeecCCCcccccCCCCcccCH
Confidence 965 457999999999999999999999999 999999999999999999999999999876544 345799999999
Q ss_pred cccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHHHHHHHHHhcccCcCCCC
Q 014478 154 EYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERP 233 (424)
Q Consensus 154 E~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rp 233 (424)
|++.+..++.++|||||||++|||++|+.||........ ...+.. .....|..+++++.+||.+||+.||++||
T Consensus 174 E~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~----~~~i~~--~~~~~p~~~s~~~~~li~~~L~~dp~~R~ 247 (263)
T d2j4za1 174 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET----YKRISR--VEFTFPDFVTEGARDLISRLLKHNPSQRP 247 (263)
T ss_dssp HHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHH----HHHHHT--TCCCCCTTSCHHHHHHHHHHTCSSGGGSC
T ss_pred HHHcCCCCCchhhhhhHhHHHHHHhcCCCCCCCCCHHHH----HHHHHc--CCCCCCccCCHHHHHHHHHHccCCHhHCc
Confidence 999998999999999999999999999999876432211 111111 12345667889999999999999999999
Q ss_pred CHHHHHHH
Q 014478 234 NAKSLVIS 241 (424)
Q Consensus 234 s~~~~~~~ 241 (424)
|++++++|
T Consensus 248 t~~eil~h 255 (263)
T d2j4za1 248 MLREVLEH 255 (263)
T ss_dssp CHHHHHTC
T ss_pred CHHHHHcC
Confidence 99999875
|
| >d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: pak1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.5e-53 Score=387.67 Aligned_cols=232 Identities=17% Similarity=0.245 Sum_probs=198.6
Q ss_pred CCCcccceeee--ecceecccccCCCc-hhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHhHhcc
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESSD-LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFH 78 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~ 78 (424)
||||.||++.+ .+..|++|++.... ...+.+.+|+++|++++|||||++++++.+++..|||||||+||+|.+++.+
T Consensus 31 G~fg~Vy~a~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~ivmEy~~gg~L~~~~~~ 110 (293)
T d1yhwa1 31 GASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTE 110 (293)
T ss_dssp SSSCEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCTTCBHHHHHHH
T ss_pred CcCcEEEEEEECCCCCEEEEEEEecccChHHHHHHHHHHHHHhCCCCCEeeEeEEEEECCEEEEEEEecCCCcHHHHhhc
Confidence 99999999986 57889998875443 3467899999999999999999999999999999999999999999998854
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCC----CccccCccCCCcc
Q 014478 79 WETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG----KSYSTNLAFTPPE 154 (424)
Q Consensus 79 ~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~----~~~~gt~~y~aPE 154 (424)
.++++.++..++.||+.||.|||++| |+||||||+|||++.+|.+||+|||+++..... ....||+.|||||
T Consensus 111 ---~~l~~~~~~~i~~qi~~aL~yLH~~~-iiHrDiKp~NILl~~~~~vkl~DFG~a~~~~~~~~~~~~~~gt~~Y~aPE 186 (293)
T d1yhwa1 111 ---TCMDEGQIAAVCRECLQALEFLHSNQ-VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPE 186 (293)
T ss_dssp ---SCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEECTTCCEEECCCTTCEECCSTTCCBCCCCSCGGGCCHH
T ss_pred ---cCCCHHHHHHHHHHHHHHHHHHHHCC-CcccCCcHHHeEECCCCcEeeccchhheeeccccccccccccCCCccChh
Confidence 47999999999999999999999999 999999999999999999999999999876432 3456999999999
Q ss_pred ccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhh-hcccCCCCCchhHHHHHHHHHHhcccCcCCCC
Q 014478 155 YMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLM-DSALEGHFSNDEGTELVRLASRCLQSEARERP 233 (424)
Q Consensus 155 ~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rp 233 (424)
++.+..++.++|||||||++|+|++|+.||....... ...... ........+..+++++.+||.+||+.||.+||
T Consensus 187 ~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~----~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~ 262 (293)
T d1yhwa1 187 VVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLR----ALYLIATNGTPELQNPEKLSAIFRDFLNRCLDMDVEKRG 262 (293)
T ss_dssp HHSSSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHH----HHHHHHHHCSCCCSSGGGSCHHHHHHHHHHTCSSTTTSC
T ss_pred hhcCCCCCchhceehHhHHHHHHhhCCCCCCCCCHHH----HHHHHHhCCCCCCCCcccCCHHHHHHHHHHccCChhHCc
Confidence 9999999999999999999999999998887642211 111111 12223344567889999999999999999999
Q ss_pred CHHHHHHH
Q 014478 234 NAKSLVIS 241 (424)
Q Consensus 234 s~~~~~~~ 241 (424)
|++|+++|
T Consensus 263 s~~eil~H 270 (293)
T d1yhwa1 263 SAKELLQH 270 (293)
T ss_dssp CHHHHTTC
T ss_pred CHHHHhcC
Confidence 99999865
|
| >d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase SYK species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.8e-53 Score=385.31 Aligned_cols=236 Identities=18% Similarity=0.238 Sum_probs=198.4
Q ss_pred CCCcccceeeeec----ceecccccCCCc---hhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHh
Q 014478 2 GGRCSKFSICWFH----CHLKSSVLESSD---LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAK 74 (424)
Q Consensus 2 G~~g~v~~~~~~~----~~v~~~~~~~~~---~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~ 74 (424)
|+||.||++.+.. ..||+|++.... ...+.|.+|+++|++++|||||+++|+|.. +..+|||||+++|+|.+
T Consensus 18 G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~g~~~~-~~~~lvmE~~~~g~L~~ 96 (277)
T d1xbba_ 18 GNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEA-ESWMLVMEMAELGPLNK 96 (277)
T ss_dssp CSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEEES-SSEEEEEECCTTEEHHH
T ss_pred CCCeEEEEEEEccCCcCeEEEEEEEChhhCCHHHHHHHHHHHHHHHhCCCCCCceEEEEecc-CCEEEEEEcCCCCcHHH
Confidence 9999999998743 457888875432 335689999999999999999999999965 45789999999999999
Q ss_pred HhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCC-------CccccC
Q 014478 75 HLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG-------KSYSTN 147 (424)
Q Consensus 75 ~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~-------~~~~gt 147 (424)
++.. ..++++.+++.++.||+.||.|||+++ ||||||||+|||++.++.+||+|||+++..... ....||
T Consensus 97 ~l~~--~~~l~~~~~~~i~~qi~~gl~ylH~~~-iiHrDlKp~Nill~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~gt 173 (277)
T d1xbba_ 97 YLQQ--NRHVKDKNIIELVHQVSMGMKYLEESN-FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWP 173 (277)
T ss_dssp HHHH--CTTCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEEEETTEEEECCCTTCEECCTTCSEEEC----CCC
T ss_pred HHhh--ccCCCHHHHHHHHHHHHHHHhhHHhCC-cccCCCcchhhcccccCcccccchhhhhhccccccccccccccCCC
Confidence 9975 567999999999999999999999999 999999999999999999999999999865432 224578
Q ss_pred ccCCCccccccCCCCCCcceehhHHHHHHHhh-CCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHHHHHHHHHhcc
Q 014478 148 LAFTPPEYMRTGRVTPESVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQ 226 (424)
Q Consensus 148 ~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~ 226 (424)
+.|||||++.++.++.++|||||||++|||+| |+.||..... ......+....+...|..+|+++.+||.+||+
T Consensus 174 ~~y~APE~l~~~~~~~~sDiwS~Gv~l~ellt~g~~Pf~~~~~-----~~~~~~i~~~~~~~~p~~~~~~~~~li~~cl~ 248 (277)
T d1xbba_ 174 VKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKG-----SEVTAMLEKGERMGCPAGCPREMYDLMNLCWT 248 (277)
T ss_dssp GGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCH-----HHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTC
T ss_pred ceecCchhhcCCCCCchhhhccchhhhhHHhhCCCCCCCCCCH-----HHHHHHHHcCCCCCCCcccCHHHHHHHHHHcC
Confidence 99999999999999999999999999999998 7888775422 22233334445556777889999999999999
Q ss_pred cCcCCCCCHHHHHHHHHHHh
Q 014478 227 SEARERPNAKSLVISLMSLQ 246 (424)
Q Consensus 227 ~dp~~Rps~~~~~~~l~~~~ 246 (424)
.||++|||+++|+..|+...
T Consensus 249 ~dp~~RPs~~~i~~~L~~~~ 268 (277)
T d1xbba_ 249 YDVENRPGFAAVELRLRNYY 268 (277)
T ss_dssp SSTTTSCCHHHHHHHHHHHH
T ss_pred CCHhHCcCHHHHHHHhhCHH
Confidence 99999999999998887654
|
| >d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: epha2 receptor tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.1e-52 Score=383.95 Aligned_cols=241 Identities=19% Similarity=0.254 Sum_probs=199.9
Q ss_pred CCCcccceeeeecc------eecccccCCC--chhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHH
Q 014478 2 GGRCSKFSICWFHC------HLKSSVLESS--DLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLA 73 (424)
Q Consensus 2 G~~g~v~~~~~~~~------~v~~~~~~~~--~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~ 73 (424)
||||.||++.+... .|++|++... ......|.+|+++|++++|||||+++|+|.+.+..++||||+.+|+|.
T Consensus 18 G~fG~Vy~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~H~nIv~~~g~~~~~~~~~~v~e~~~~~~l~ 97 (283)
T d1mqba_ 18 GEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMIITEYMENGALD 97 (283)
T ss_dssp CSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEECCTTEEHH
T ss_pred CCCeEEEEEEEeCCCCEEEEEEEEEEECcccChHHHHHHHHHHHHHHhcCCCCEeeeeEEEecCCceEEEEEecccCcch
Confidence 99999999988542 4778877543 334567999999999999999999999999999999999999999999
Q ss_pred hHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCC-------Ccccc
Q 014478 74 KHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG-------KSYST 146 (424)
Q Consensus 74 ~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~-------~~~~g 146 (424)
+++.. ....+++.++++++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++..... ....|
T Consensus 98 ~~~~~-~~~~~~~~~~~~i~~~i~~gl~~lH~~~-iiHrDlKp~NILl~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~~g 175 (283)
T d1mqba_ 98 KFLRE-KDGEFSVLQLVGMLRGIAAGMKYLANMN-YVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKI 175 (283)
T ss_dssp HHHHH-TTTCSCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEECTTCCEEECCCCC-----------------CC
T ss_pred hhhhc-ccccccHHHHHHHHHHHHHhhhhccccc-cccCccccceEEECCCCeEEEcccchhhcccCCCccceEeccCCC
Confidence 98865 4567999999999999999999999999 999999999999999999999999999865432 12357
Q ss_pred CccCCCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHHHHHHHHHhcc
Q 014478 147 NLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQ 226 (424)
Q Consensus 147 t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~ 226 (424)
|+.|||||++.++.++.++|||||||++|||++|..|+.... ........+....+...+..++.++.+||.+||+
T Consensus 176 t~~Y~APE~l~~~~~~~~sDI~S~Gvil~el~t~~~~~~~~~----~~~~~~~~i~~~~~~~~~~~~~~~l~~li~~cl~ 251 (283)
T d1mqba_ 176 PIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWEL----SNHEVMKAINDGFRLPTPMDCPSAIYQLMMQCWQ 251 (283)
T ss_dssp CGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTC----CHHHHHHHHHTTCCCCCCTTCBHHHHHHHHHHTC
T ss_pred CccccCHHHHccCCCCCcccccccHHHHHHHHhCCCCccccC----CHHHHHHHHhccCCCCCchhhHHHHHHHHHHHCc
Confidence 899999999999999999999999999999999776655431 1222333444455566777889999999999999
Q ss_pred cCcCCCCCHHHHHHHHHHHhhh
Q 014478 227 SEARERPNAKSLVISLMSLQKE 248 (424)
Q Consensus 227 ~dp~~Rps~~~~~~~l~~~~~~ 248 (424)
.||++|||+.+|++.|+.+.+.
T Consensus 252 ~~p~~RPt~~eil~~L~~l~~~ 273 (283)
T d1mqba_ 252 QERARRPKFADIVSILDKLIRA 273 (283)
T ss_dssp SSTTTSCCHHHHHHHHHHHHHS
T ss_pred CCHhHCcCHHHHHHHHHHHhhC
Confidence 9999999999999999988764
|
| >d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell cycle checkpoint kinase chk1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.9e-53 Score=385.28 Aligned_cols=234 Identities=15% Similarity=0.118 Sum_probs=193.1
Q ss_pred CCCcccceeee--ecceecccccCCCc--hhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHhHhc
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESSD--LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLF 77 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~~--~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~ 77 (424)
|+||.||.+.+ .+..+|+|++.... ...+.+.+|+++|++++||||+++++++.+++..|||||||+||+|.+++.
T Consensus 16 G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~~~~~~~~~~~~~ivmEy~~gg~L~~~l~ 95 (271)
T d1nvra_ 16 GAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIE 95 (271)
T ss_dssp ETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCTTEEGGGGSB
T ss_pred CcCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHhCCCCCEeeEeeeeccCceeEEEEeccCCCcHHHHHh
Confidence 89999999998 46788888875433 345679999999999999999999999999999999999999999999996
Q ss_pred cCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCC------CCccccCccCC
Q 014478 78 HWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRD------GKSYSTNLAFT 151 (424)
Q Consensus 78 ~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~------~~~~~gt~~y~ 151 (424)
. ...+++.++..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++.... .....||+.||
T Consensus 96 ~--~~~l~e~~~~~i~~qi~~al~ylH~~~-IiHrDiKp~NILl~~~~~~KL~DFG~a~~~~~~~~~~~~~~~~GT~~Y~ 172 (271)
T d1nvra_ 96 P--DIGMPEPDAQRFFHQLMAGVVYLHGIG-ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYV 172 (271)
T ss_dssp T--TTBCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCCGGGEEECTTCCEEECCCTTCEECEETTEECCBCCCCSCGGGS
T ss_pred c--CCCCCHHHHHHHHHHHHHHHHHHHHcC-CccCcccHHHEEECCCCCEEEccchhheeeccCCccccccceeeCcCcc
Confidence 4 567999999999999999999999999 99999999999999999999999999986532 23457999999
Q ss_pred CccccccCCC-CCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHHHHHHHHHhcccCcC
Q 014478 152 PPEYMRTGRV-TPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEAR 230 (424)
Q Consensus 152 aPE~~~~~~~-~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~ 230 (424)
|||++.+..+ +.++|||||||++|||++|+.||....... ..................+++++.+||.+||+.||+
T Consensus 173 APE~~~~~~~~~~~~DiwSlGvilyeml~G~~pf~~~~~~~---~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~ 249 (271)
T d1nvra_ 173 APELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSC---QEYSDWKEKKTYLNPWKKIDSAPLALLHKILVENPS 249 (271)
T ss_dssp CTHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSSTTS---HHHHHHHTTCTTSTTGGGSCHHHHHHHHHHSCSSTT
T ss_pred CHhHhcCCCCCCCceeeeHhHHHHHHHHhCCCCCCCCChHH---HHHHHHhcCCCCCCccccCCHHHHHHHHHHcCCChh
Confidence 9999998776 578999999999999999998886532111 111111222222223346788999999999999999
Q ss_pred CCCCHHHHHHH
Q 014478 231 ERPNAKSLVIS 241 (424)
Q Consensus 231 ~Rps~~~~~~~ 241 (424)
+|||+++++++
T Consensus 250 ~R~t~~eil~h 260 (271)
T d1nvra_ 250 ARITIPDIKKD 260 (271)
T ss_dssp TSCCHHHHTTC
T ss_pred HCcCHHHHhcC
Confidence 99999999754
|
| >d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine protein kinase TAO2 species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=4.2e-53 Score=390.32 Aligned_cols=233 Identities=18% Similarity=0.187 Sum_probs=199.8
Q ss_pred CCCcccceeee--ecceecccccCCCc----hhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHhH
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESSD----LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKH 75 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~~----~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~ 75 (424)
||||.||++.+ .+..||+|++.... ...+.+.+|+++|++++|||||++++++.+++..+||||||+||+|..+
T Consensus 26 G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~iv~E~~~~g~l~~~ 105 (309)
T d1u5ra_ 26 GSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYCLGSASDLL 105 (309)
T ss_dssp CSSSEEEEEEETTTTEEEEEEEEECCSSCHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECCSEEHHHHH
T ss_pred CCCeEEEEEEECCCCcEEEEEEEchhhccCHHHHHHHHHHHHHHHHCCCCCEeeEEEEEEECCEEEEEEEecCCCchHHH
Confidence 99999999987 56778888875433 2346789999999999999999999999999999999999999999877
Q ss_pred hccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCCCccccCccCCCccc
Q 014478 76 LFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLAFTPPEY 155 (424)
Q Consensus 76 l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~gt~~y~aPE~ 155 (424)
+.. ..++++.+++.++.||+.||.|||+++ ||||||||+|||++.++.+||+|||+++.........||+.|||||+
T Consensus 106 ~~~--~~~l~e~~~~~i~~qi~~aL~yLH~~~-iiHrDiKp~NILl~~~~~~Kl~DFG~a~~~~~~~~~~GT~~Y~APE~ 182 (309)
T d1u5ra_ 106 EVH--KKPLQEVEIAAVTHGALQGLAYLHSHN-MIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANSFVGTPYWMAPEV 182 (309)
T ss_dssp HHH--TSCCCHHHHHHHHHHHHHHHHHHHHTT-CBCCCCSGGGEEEETTTEEEECCCTTCBSSSSBCCCCSCGGGCCHHH
T ss_pred HHh--CCCCCHHHHHHHHHHHHHHHHHHHhCC-EeccCCCcceEEECCCCCEEEeecccccccCCCCccccCccccCHHH
Confidence 654 568999999999999999999999999 99999999999999999999999999998887788899999999999
Q ss_pred ccc---CCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHHHHHHHHHhcccCcCCC
Q 014478 156 MRT---GRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARER 232 (424)
Q Consensus 156 ~~~---~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~R 232 (424)
+.+ +.++.++|||||||++|||++|..||..... ................+..+++++.+||.+||+.||++|
T Consensus 183 ~~~~~~~~y~~~~DiwSlGvilyel~~g~~Pf~~~~~----~~~~~~i~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R 258 (309)
T d1u5ra_ 183 ILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNA----MSALYHIAQNESPALQSGHWSEYFRNFVDSCLQKIPQDR 258 (309)
T ss_dssp HTTTTSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCH----HHHHHHHHHSCCCCCSCTTSCHHHHHHHHHHTCSSGGGS
T ss_pred HhccCCCCcCchhhhhhHHHHHHHHHHCCCCCCCCCH----HHHHHHHHhCCCCCCCCCCCCHHHHHHHHHHCcCChhHC
Confidence 864 4589999999999999999999988875421 112222333333333455678899999999999999999
Q ss_pred CCHHHHHHH
Q 014478 233 PNAKSLVIS 241 (424)
Q Consensus 233 ps~~~~~~~ 241 (424)
||++++++|
T Consensus 259 pt~~ell~H 267 (309)
T d1u5ra_ 259 PTSEVLLKH 267 (309)
T ss_dssp CCHHHHTTC
T ss_pred cCHHHHHhC
Confidence 999999875
|
| >d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Bruton's tyrosine kinase (Btk) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=9.5e-53 Score=378.41 Aligned_cols=236 Identities=22% Similarity=0.333 Sum_probs=204.8
Q ss_pred CCCcccceeeee-cceecccccCCCchhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHhHhccCC
Q 014478 2 GGRCSKFSICWF-HCHLKSSVLESSDLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWE 80 (424)
Q Consensus 2 G~~g~v~~~~~~-~~~v~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~ 80 (424)
|+||.||++.+. +..|++|++..+....+.|.+|++++++++||||++++|+|.+++..++||||+++|+|.+++.. .
T Consensus 15 G~fg~Vy~~~~~~~~~vAvK~l~~~~~~~~~~~~Ev~~~~~l~HpnIv~~~g~~~~~~~~~iv~Ey~~~g~l~~~~~~-~ 93 (258)
T d1k2pa_ 15 GQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLRE-M 93 (258)
T ss_dssp ETTEEEEEEEETTTEEEEEEEEESSSSCHHHHHHHHHHHHTCCCTTBCCEEEEECCSSSEEEEEECCTTEEHHHHHHS-G
T ss_pred CCCeEEEEEEECCCCEEEEEEECcCcCCHHHHHHHHHHHHhcCCCceeeEEEEEeeCCceEEEEEccCCCcHHHhhhc-c
Confidence 899999999994 44788999887777788999999999999999999999999999999999999999999999754 3
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCC-----CccccCccCCCccc
Q 014478 81 TQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG-----KSYSTNLAFTPPEY 155 (424)
Q Consensus 81 ~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~-----~~~~gt~~y~aPE~ 155 (424)
...+++..+++++.|++.||.|||+++ |+||||||+|||++.++.+||+|||+++..... ....||+.|+|||.
T Consensus 94 ~~~~~~~~~~~i~~qi~~gl~~LH~~~-iiH~dlk~~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~t~~y~aPE~ 172 (258)
T d1k2pa_ 94 RHRFQTQQLLEMCKDVCEAMEYLESKQ-FLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEV 172 (258)
T ss_dssp GGCCCHHHHHHHHHHHHHHHHHHHHTT-BCCSCCSGGGEEECTTCCEEECCCSSCCBCSSSSCCCCCCSCCCGGGCCHHH
T ss_pred ccCCcHHHHHHHHHHHHHHHHHHhhcC-cccccccceeEEEcCCCcEEECcchhheeccCCCceeecccCCCCCcCCcHH
Confidence 567899999999999999999999999 999999999999999999999999999765432 23457899999999
Q ss_pred cccCCCCCCcceehhHHHHHHHhh-CCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHHHHHHHHHhcccCcCCCCC
Q 014478 156 MRTGRVTPESVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERPN 234 (424)
Q Consensus 156 ~~~~~~~~~~Dv~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps 234 (424)
+.+..++.++|||||||++|||+| |+.||...... .....+....+...|..+++++.+||.+||+.||++|||
T Consensus 173 ~~~~~~~~ksDiwS~G~~l~el~t~g~~Pf~~~~~~-----~~~~~i~~~~~~~~p~~~~~~l~~li~~cl~~dP~~RPt 247 (258)
T d1k2pa_ 173 LMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNS-----ETAEHIAQGLRLYRPHLASEKVYTIMYSCWHEKADERPT 247 (258)
T ss_dssp HHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCHH-----HHHHHHHTTCCCCCCTTCCHHHHHHHHHTTCSSGGGSCC
T ss_pred hcCCCCCcceeecccchhhHhHHhcCCCCCCCCCHH-----HHHHHHHhCCCCCCcccccHHHHHHHHHHccCCHhHCcC
Confidence 999999999999999999999998 78777654222 222233334455667788899999999999999999999
Q ss_pred HHHHHHHHHH
Q 014478 235 AKSLVISLMS 244 (424)
Q Consensus 235 ~~~~~~~l~~ 244 (424)
+++++++|..
T Consensus 248 ~~eil~~L~d 257 (258)
T d1k2pa_ 248 FKILLSNILD 257 (258)
T ss_dssp HHHHHHHHHC
T ss_pred HHHHHHHhhC
Confidence 9999999864
|
| >d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine-protein kinase Nek2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.8e-53 Score=383.37 Aligned_cols=235 Identities=18% Similarity=0.210 Sum_probs=187.8
Q ss_pred CCCcccceeee--ecceecccccCCCc---hhhhHHHHHHHHHhcCCCcCcceeEEEEEe--CCeeeEEEecCCCCCHHh
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESSD---LGETLNLEEAKAVGNLRSERLANLIGCCYE--ADERLLVAEFMPNETLAK 74 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~~---~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~--~~~~~lv~e~~~~gsL~~ 74 (424)
||||.||++.+ .+..|++|++.... ...+.+.+|+++|++++|||||++++++.+ ++..|||||||+||+|.+
T Consensus 15 G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~~~ivmEy~~~g~L~~ 94 (269)
T d2java1 15 GSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLAS 94 (269)
T ss_dssp CSSEEEEEEEETTTCCEEEEEEECCTTSCHHHHHHHHHHHHHTTSCCCTTBCCEEEEEEC----CEEEEEECCTTEEHHH
T ss_pred CCCeEEEEEEECCCCCEEEEEEEChhhCCHHHHHHHHHHHHHHHHCCCCCEeeEEEEEEeCCCCEEEEEEecCCCCcHHH
Confidence 99999999988 46788888875443 345678999999999999999999999865 456899999999999999
Q ss_pred HhccC--CCCCCCHHHHHHHHHHHHHHHHHHHhCC----CcccccCCCCCeeecCCCCeEEccccccccCCCC----Ccc
Q 014478 75 HLFHW--ETQPMKWAMRLRVALYLAQALEYCSSKG----RALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG----KSY 144 (424)
Q Consensus 75 ~l~~~--~~~~l~~~~~~~i~~qi~~~L~~lH~~~----~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~----~~~ 144 (424)
++.+. .+..+++.+++.++.||+.||.|||+++ +||||||||+|||++.++.+||+|||+++..... ...
T Consensus 95 ~i~~~~~~~~~l~e~~~~~i~~qi~~al~ylH~~~~~~~~IiHrDiKp~NIll~~~~~vkl~DFG~a~~~~~~~~~~~~~ 174 (269)
T d2java1 95 VITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKAF 174 (269)
T ss_dssp HHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHHCC---------CCGGGEEECTTSCEEECCHHHHHHC----------
T ss_pred HHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCEEeCcCchhhcCcCCCCcEEEeeccceeecccCCCccccC
Confidence 98532 3467999999999999999999999864 3999999999999999999999999999876543 345
Q ss_pred ccCccCCCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHHHHHHHHHh
Q 014478 145 STNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRC 224 (424)
Q Consensus 145 ~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c 224 (424)
.||+.|||||++.+..++.++|||||||++|||+||+.||....... ....+........+..+++++.+||.+|
T Consensus 175 ~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyel~tg~~Pf~~~~~~~-----~~~~i~~~~~~~~~~~~s~~l~~li~~~ 249 (269)
T d2java1 175 VGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKE-----LAGKIREGKFRRIPYRYSDELNEIITRM 249 (269)
T ss_dssp -CCCSCCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHH-----HHHHHHHTCCCCCCTTSCHHHHHHHHHH
T ss_pred CCCcccCCHHHHcCCCCChHHHHHhhCHHHHHHhhCCCCCCCCCHHH-----HHHHHHcCCCCCCCcccCHHHHHHHHHH
Confidence 78999999999998899999999999999999999998887643222 1122222233355667889999999999
Q ss_pred cccCcCCCCCHHHHHHH
Q 014478 225 LQSEARERPNAKSLVIS 241 (424)
Q Consensus 225 l~~dp~~Rps~~~~~~~ 241 (424)
|+.||.+|||+++++++
T Consensus 250 L~~dp~~Rps~~ell~h 266 (269)
T d2java1 250 LNLKDYHRPSVEEILEN 266 (269)
T ss_dssp TCSSGGGSCCHHHHHTS
T ss_pred cCCChhHCcCHHHHHhC
Confidence 99999999999999864
|
| >d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: STE20-like serine/threonine-protein kinase, SLK species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=8.9e-53 Score=384.52 Aligned_cols=234 Identities=15% Similarity=0.207 Sum_probs=196.8
Q ss_pred CCCcccceeee--ecceecccccCCC-chhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHhHhcc
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESS-DLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFH 78 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~ 78 (424)
|+||.||++.+ .+..+|+|++... ....+.|.+|+++|++++|||||++++++.+++..+||||||+||+|.+++.+
T Consensus 23 G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lvmEy~~~g~L~~~~~~ 102 (288)
T d2jfla1 23 GAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLE 102 (288)
T ss_dssp ETTEEEEEEEETTTCCEEEEEEEECSSSGGGGGTHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCTTEEHHHHHHH
T ss_pred CCCcEEEEEEECCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCeEEEEEecCCCCcHHHHHHh
Confidence 89999999998 5667888887543 44567899999999999999999999999999999999999999999999764
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCC----CCccccCccCCCcc
Q 014478 79 WETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRD----GKSYSTNLAFTPPE 154 (424)
Q Consensus 79 ~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~----~~~~~gt~~y~aPE 154 (424)
...++++.++..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++.... .....||+.|||||
T Consensus 103 -~~~~l~e~~~~~i~~qi~~gL~ylH~~~-ivHrDiKp~NIll~~~~~~Kl~DFG~a~~~~~~~~~~~~~~Gt~~y~APE 180 (288)
T d2jfla1 103 -LERPLTESQIQVVCKQTLDALNYLHDNK-IIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRDSFIGTPYWMAPE 180 (288)
T ss_dssp -HTSCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEECTTSCEEECCCTTCEECHHHHHHHTCCCSCCTTCCHH
T ss_pred -cCCCCCHHHHHHHHHHHHHHHHHHHHCC-EEEeecChhheeECCCCCEEEEechhhhccCCCcccccccccccccCCHH
Confidence 2467999999999999999999999999 99999999999999999999999999876542 23567999999999
Q ss_pred ccc-----cCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhc-ccCCCCCchhHHHHHHHHHHhcccC
Q 014478 155 YMR-----TGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDS-ALEGHFSNDEGTELVRLASRCLQSE 228 (424)
Q Consensus 155 ~~~-----~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~li~~cl~~d 228 (424)
++. +..++.++|||||||++|||++|+.||...... ......... ......+..+++++.+||.+||+.|
T Consensus 181 ~l~~~~~~~~~y~~k~DiwSlGvilyemltg~~Pf~~~~~~----~~~~~i~~~~~~~~~~~~~~s~~~~~li~~~L~~d 256 (288)
T d2jfla1 181 VVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPM----RVLLKIAKSEPPTLAQPSRWSSNFKDFLKKCLEKN 256 (288)
T ss_dssp HHTTCSTTTSSTTTHHHHHHHHHHHHHHHHSSCTTTTSCGG----GHHHHHHHSCCCCCSSGGGSCHHHHHHHHHHSCSS
T ss_pred HHhhcccCCCCCChhhhHHHHHHHHHHHhhCCCCCCCCCHH----HHHHHHHcCCCCCCCccccCCHHHHHHHHHHccCC
Confidence 984 456899999999999999999999888754211 111222221 1222345678899999999999999
Q ss_pred cCCCCCHHHHHHH
Q 014478 229 ARERPNAKSLVIS 241 (424)
Q Consensus 229 p~~Rps~~~~~~~ 241 (424)
|++|||++|+++|
T Consensus 257 p~~R~t~~ell~h 269 (288)
T d2jfla1 257 VDARWTTSQLLQH 269 (288)
T ss_dssp TTTSCCHHHHTTS
T ss_pred hhHCcCHHHHhcC
Confidence 9999999999864
|
| >d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase wnk1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.3e-52 Score=378.23 Aligned_cols=234 Identities=17% Similarity=0.203 Sum_probs=190.2
Q ss_pred CCCcccceeeee--cceecccccCCC---chhhhHHHHHHHHHhcCCCcCcceeEEEEEe----CCeeeEEEecCCCCCH
Q 014478 2 GGRCSKFSICWF--HCHLKSSVLESS---DLGETLNLEEAKAVGNLRSERLANLIGCCYE----ADERLLVAEFMPNETL 72 (424)
Q Consensus 2 G~~g~v~~~~~~--~~~v~~~~~~~~---~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~----~~~~~lv~e~~~~gsL 72 (424)
||||.||++.+. +..|++|++... ....+.|.+|+++|++++|||||++++++.. +...+|||||++||+|
T Consensus 20 G~fg~Vy~~~~~~~~~~va~K~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~~~~~ivmE~~~~g~L 99 (270)
T d1t4ha_ 20 GSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVTELMTSGTL 99 (270)
T ss_dssp CSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEEEEEECCCSCBH
T ss_pred CcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEeeccccCCEEEEEEeCCCCCcH
Confidence 999999999984 556777776433 3346688999999999999999999999875 3457899999999999
Q ss_pred HhHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCC-CcccccCCCCCeeec-CCCCeEEccccccccCCCC--CccccCc
Q 014478 73 AKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKG-RALYHDLNAYRILFD-KDGNPRLSSFGLMKNSRDG--KSYSTNL 148 (424)
Q Consensus 73 ~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~-~ivH~dikp~Nill~-~~~~~kl~Dfg~~~~~~~~--~~~~gt~ 148 (424)
.+++.+ ...+++.++..++.||+.||.|||+++ +|+||||||+|||++ .++.+||+|||+++..... ....||+
T Consensus 100 ~~~l~~--~~~~~~~~~~~~~~qi~~gl~yLH~~~~~IiHrDiKp~NILl~~~~~~~Kl~DFGla~~~~~~~~~~~~GT~ 177 (270)
T d1t4ha_ 100 KTYLKR--FKVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRASFAKAVIGTP 177 (270)
T ss_dssp HHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHTSSSCCCCSCCCGGGEEESSTTSCEEECCTTGGGGCCTTSBEESCSSC
T ss_pred HHHHhc--cccccHHHHHHHHHHHHHHHHHHHHCCCCEEeCCcChhhceeeCCCCCEEEeecCcceeccCCccCCcccCc
Confidence 999965 467999999999999999999999976 399999999999996 5789999999999865543 3457999
Q ss_pred cCCCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHHHHHHHHHhcccC
Q 014478 149 AFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSE 228 (424)
Q Consensus 149 ~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~d 228 (424)
.|||||++.+ +++.++|||||||++|||++|+.||........ ....+.....+...+..+++++.+||.+||+.|
T Consensus 178 ~Y~aPE~~~~-~~~~~~DIwSlGvilyel~~g~~Pf~~~~~~~~---~~~~i~~~~~~~~~~~~~~~~~~~li~~~l~~d 253 (270)
T d1t4ha_ 178 EFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQNAAQ---IYRRVTSGVKPASFDKVAIPEVKEIIEGCIRQN 253 (270)
T ss_dssp CCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHH---HHHHHTTTCCCGGGGGCCCHHHHHHHHHHSCSS
T ss_pred cccCHHHhCC-CCCCcCchhhHHHHHHHHHHCCCCCCCcccHHH---HHHHHHcCCCCcccCccCCHHHHHHHHHHccCC
Confidence 9999999874 699999999999999999999998865311110 111111112222334456788999999999999
Q ss_pred cCCCCCHHHHHHH
Q 014478 229 ARERPNAKSLVIS 241 (424)
Q Consensus 229 p~~Rps~~~~~~~ 241 (424)
|++|||++|+++|
T Consensus 254 p~~R~s~~ell~H 266 (270)
T d1t4ha_ 254 KDERYSIKDLLNH 266 (270)
T ss_dssp GGGSCCHHHHHTS
T ss_pred HhHCcCHHHHhCC
Confidence 9999999999864
|
| >d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fl cytokine receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.4e-52 Score=390.88 Aligned_cols=238 Identities=20% Similarity=0.293 Sum_probs=198.2
Q ss_pred CCCcccceeeeecc-------eecccccCCC--chhhhHHHHHHHHHhcC-CCcCcceeEEEEEeCCeeeEEEecCCCCC
Q 014478 2 GGRCSKFSICWFHC-------HLKSSVLESS--DLGETLNLEEAKAVGNL-RSERLANLIGCCYEADERLLVAEFMPNET 71 (424)
Q Consensus 2 G~~g~v~~~~~~~~-------~v~~~~~~~~--~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~~~~gs 71 (424)
||||.||++.+.+. .|++|++... ......|.+|+.+|.++ +|||||+++++|.+.+..+||||||+||+
T Consensus 48 G~fG~Vy~a~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~lv~Ey~~~g~ 127 (325)
T d1rjba_ 48 GAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSGPIYLIFEYCCYGD 127 (325)
T ss_dssp CSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCTTCB
T ss_pred CCCeEEEEEEEcCCCcccceeEEEEEEeccccCHHHHHHHHHHHHHHHHhcCCCcEeEEEEEEeeCCeEEEEEEcCCCCc
Confidence 99999999998542 4677766432 33456889999999998 89999999999999999999999999999
Q ss_pred HHhHhccCC---------------------CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEc
Q 014478 72 LAKHLFHWE---------------------TQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLS 130 (424)
Q Consensus 72 L~~~l~~~~---------------------~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~ 130 (424)
|.+++.... ...+++.+++.++.||+.||.|||+++ ||||||||+|||++.++.+||+
T Consensus 128 L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~-IiHRDlKp~Nill~~~~~~Kl~ 206 (325)
T d1rjba_ 128 LLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKS-CVHRDLAARNVLVTHGKVVKIC 206 (325)
T ss_dssp HHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHTT-EEETTCSGGGEEEETTTEEEEC
T ss_pred HHHHHHhccCCCcchhhhhccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhCC-eeeccCchhccccccCCeEEEe
Confidence 999996532 135899999999999999999999999 9999999999999999999999
Q ss_pred cccccccCCCCC------ccccCccCCCccccccCCCCCCcceehhHHHHHHHhh-CCCCCCchhhHHHhhhhhhHhhhc
Q 014478 131 SFGLMKNSRDGK------SYSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKNFLLLMDS 203 (424)
Q Consensus 131 Dfg~~~~~~~~~------~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~ 203 (424)
|||+++...... ...||+.|||||++.++.++.++|||||||++|||+| |..||..... ...+...+..
T Consensus 207 DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DiwS~Gvil~emlt~g~~Pf~~~~~----~~~~~~~~~~ 282 (325)
T d1rjba_ 207 DFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIPV----DANFYKLIQN 282 (325)
T ss_dssp CCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCC----SHHHHHHHHT
T ss_pred eccccccccCCCceeeeccccCCCccCChHHHcCCCCCcceeccchhHHHHHHHhCCCCCCCCCCH----HHHHHHHHhc
Confidence 999998654332 3356899999999999999999999999999999998 7888765321 1223334445
Q ss_pred ccCCCCCchhHHHHHHHHHHhcccCcCCCCCHHHHHHHHHH
Q 014478 204 ALEGHFSNDEGTELVRLASRCLQSEARERPNAKSLVISLMS 244 (424)
Q Consensus 204 ~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~~~~~l~~ 244 (424)
..+...|..+++++.+||.+||+.||++|||+++|+++|..
T Consensus 283 ~~~~~~p~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~~ 323 (325)
T d1rjba_ 283 GFKMDQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFLGC 323 (325)
T ss_dssp TCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred CCCCCCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHhC
Confidence 55566777889999999999999999999999999999853
|
| >d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Carboxyl-terminal src kinase (csk) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.7e-52 Score=377.31 Aligned_cols=239 Identities=21% Similarity=0.301 Sum_probs=197.9
Q ss_pred CCCcccceeeeecceecccccCCCchhhhHHHHHHHHHhcCCCcCcceeEEEEEe-CCeeeEEEecCCCCCHHhHhccCC
Q 014478 2 GGRCSKFSICWFHCHLKSSVLESSDLGETLNLEEAKAVGNLRSERLANLIGCCYE-ADERLLVAEFMPNETLAKHLFHWE 80 (424)
Q Consensus 2 G~~g~v~~~~~~~~~v~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-~~~~~lv~e~~~~gsL~~~l~~~~ 80 (424)
|+||.||++.+.+..|++|++..+. ..+.|.+|++++++++||||++++|+|.+ .+..++||||+++|+|.+++....
T Consensus 18 G~fg~Vy~~~~~~~~vAvK~i~~~~-~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~~lv~ey~~~g~L~~~l~~~~ 96 (262)
T d1byga_ 18 GEFGDVMLGDYRGNKVAVKCIKNDA-TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRG 96 (262)
T ss_dssp CSSCEEEEEEETTEEEEEEECCCCC---HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEECCCTTEEHHHHHHHHH
T ss_pred CCCeEEEEEEECCeEEEEEEECcHH-HHHHHHHHHHHHHhCCCCCEeeEEEEEEecCCcEEEEEeccCCCCHHHHHHhcC
Confidence 9999999999999999999986554 45789999999999999999999999965 456899999999999999996533
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCC-CccccCccCCCccccccC
Q 014478 81 TQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG-KSYSTNLAFTPPEYMRTG 159 (424)
Q Consensus 81 ~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~-~~~~gt~~y~aPE~~~~~ 159 (424)
...+++..+++++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++..... ....+|..|+|||++.++
T Consensus 97 ~~~l~~~~~~~i~~~i~~al~ylH~~~-ivH~dlkp~Nil~~~~~~~kl~dfg~s~~~~~~~~~~~~~~~y~aPE~l~~~ 175 (262)
T d1byga_ 97 RSVLGGDCLLKFSLDVCEAMEYLEGNN-FVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWTAPEALREK 175 (262)
T ss_dssp HHHCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEECTTSCEEECCCCC------------CCTTTSCHHHHHHC
T ss_pred CCCCCHHHHHHHHHHHHhhccccccCc-eeccccchHhheecCCCCEeecccccceecCCCCccccccccCCChHHHhCC
Confidence 446899999999999999999999999 999999999999999999999999999875543 345678999999999999
Q ss_pred CCCCCcceehhHHHHHHHhh-CCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHHHHHHHHHhcccCcCCCCCHHHH
Q 014478 160 RVTPESVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERPNAKSL 238 (424)
Q Consensus 160 ~~~~~~Dv~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~~ 238 (424)
.++.++|||||||++|||+| |+.|+... ........+........+..+++++.+||.+||+.||++|||+.++
T Consensus 176 ~~t~~sDIwSfG~il~el~t~~~~p~~~~-----~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~cl~~dP~~Rps~~~l 250 (262)
T d1byga_ 176 KFSTKSDVWSFGILLWEIYSFGRVPYPRI-----PLKDVVPRVEKGYKMDAPDGCPPAVYEVMKNCWHLDAAMRPSFLQL 250 (262)
T ss_dssp CCCHHHHHHHHHHHHHHHHTTSCCSCTTS-----CGGGHHHHHTTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred CCChHHHHHhHHHHHHHHHHCCCCCCCCC-----CHHHHHHHHHcCCCCCCCccCCHHHHHHHHHHcccCHhHCcCHHHH
Confidence 99999999999999999998 56555442 2223333344455666777889999999999999999999999999
Q ss_pred HHHHHHHhh
Q 014478 239 VISLMSLQK 247 (424)
Q Consensus 239 ~~~l~~~~~ 247 (424)
+++|+++..
T Consensus 251 ~~~L~~i~~ 259 (262)
T d1byga_ 251 REQLEHIKT 259 (262)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHh
Confidence 999998865
|
| >d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-src tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.4e-52 Score=380.77 Aligned_cols=240 Identities=22% Similarity=0.307 Sum_probs=200.6
Q ss_pred CCCcccceeeeec-ceecccccCCCchhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHhHhccCC
Q 014478 2 GGRCSKFSICWFH-CHLKSSVLESSDLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWE 80 (424)
Q Consensus 2 G~~g~v~~~~~~~-~~v~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~ 80 (424)
|+||.||++.+.+ ..|++|++.......+.|.+|+.+|++++|||||+++|+|.+ +..++||||+++|+|..++....
T Consensus 28 G~fg~Vy~~~~~~~~~vAiK~l~~~~~~~~~~~~E~~~l~~l~h~nIv~~~g~~~~-~~~~lv~Ey~~~g~l~~~~~~~~ 106 (285)
T d1fmka3 28 GCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLKGET 106 (285)
T ss_dssp CSSCEEEEEEETTTEEEEEEECCTTSSCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEECCCTTCBHHHHHSHHH
T ss_pred CCCeEEEEEEECCCCEEEEEEECcccCCHHHHHHHHHHHHhcccCCEeEEEEEEec-CCeEEEEEecCCCchhhhhhhcc
Confidence 9999999999844 468899998777778899999999999999999999999854 56899999999999999987544
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCC-----CccccCccCCCccc
Q 014478 81 TQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG-----KSYSTNLAFTPPEY 155 (424)
Q Consensus 81 ~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~-----~~~~gt~~y~aPE~ 155 (424)
...+++.+++.++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++..... ....||+.|+|||+
T Consensus 107 ~~~l~~~~~~~i~~~i~~gl~~LH~~~-ivH~DlKp~NIll~~~~~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~ 185 (285)
T d1fmka3 107 GKYLRLPQLVDMAAQIASGMAYVERMN-YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEA 185 (285)
T ss_dssp HTTCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEECGGGCEEECCCCTTC--------------CCGGGSCHHH
T ss_pred cccchHHHHHHHHHHHHHHHHHHhhhh-eecccccceEEEECCCCcEEEcccchhhhccCCCceeeccccccccccChHH
Confidence 567999999999999999999999999 999999999999999999999999999865432 23468899999999
Q ss_pred cccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHHHHHHHHHhcccCcCCCCCH
Q 014478 156 MRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERPNA 235 (424)
Q Consensus 156 ~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~ 235 (424)
+..+.++.++|||||||++|||++|..|+..... .......+......+.+..+++++.++|.+||+.||++|||+
T Consensus 186 ~~~~~~~~ksDI~S~Giil~el~t~~~p~~~~~~----~~~~~~~i~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~ 261 (285)
T d1fmka3 186 ALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMV----NREVLDQVERGYRMPCPPECPESLHDLMCQCWRKEPEERPTF 261 (285)
T ss_dssp HHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCC----HHHHHHHHHTTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCH
T ss_pred HhCCCCCcHHhhhcchHHHHHHHhCCCCCCCCCC----HHHHHHHHHhcCCCCCCcccCHHHHHHHHHHcccCHhHCcCH
Confidence 9999999999999999999999997766554311 111222233344456677889999999999999999999999
Q ss_pred HHHHHHHHHHhh
Q 014478 236 KSLVISLMSLQK 247 (424)
Q Consensus 236 ~~~~~~l~~~~~ 247 (424)
++|++.|+....
T Consensus 262 ~~i~~~L~~~~~ 273 (285)
T d1fmka3 262 EYLQAFLEDYFT 273 (285)
T ss_dssp HHHHHHHHTTTS
T ss_pred HHHHHHHhhhhc
Confidence 999988877553
|
| >d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Calmodulin-dependent protein kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=5.3e-52 Score=382.86 Aligned_cols=233 Identities=13% Similarity=0.151 Sum_probs=183.4
Q ss_pred CCCcccceeee--ecceecccccCCCc--hhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHhHhc
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESSD--LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLF 77 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~~--~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~ 77 (424)
|+||.||.+.+ .+..+|+|++.... .....+.+|+++|++++|||||++++++.+++..|||||||+||+|.+++.
T Consensus 20 G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lvmE~~~gg~L~~~l~ 99 (307)
T d1a06a_ 20 GAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIV 99 (307)
T ss_dssp GGGGGEEEEEETTTCCEEEEEEEEC----------CHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHH
T ss_pred ccCeEEEEEEECCCCCEEEEEEEchHHhhhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeccCCCcHHHhhh
Confidence 89999999987 46778988875443 234678899999999999999999999999999999999999999999996
Q ss_pred cCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeec---CCCCeEEccccccccCCCC---CccccCccCC
Q 014478 78 HWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFD---KDGNPRLSSFGLMKNSRDG---KSYSTNLAFT 151 (424)
Q Consensus 78 ~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~---~~~~~kl~Dfg~~~~~~~~---~~~~gt~~y~ 151 (424)
. .+.+++.++..++.||+.||.|||+++ |+||||||+|||+. .++.+||+|||+++..... ....||+.||
T Consensus 100 ~--~~~l~e~~~~~~~~qi~~al~ylH~~~-iiHrDiKp~Nil~~~~~~~~~vkl~DFG~a~~~~~~~~~~~~~GT~~y~ 176 (307)
T d1a06a_ 100 E--KGFYTERDASRLIFQVLDAVKYLHDLG-IVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYV 176 (307)
T ss_dssp T--CSCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEESSSSTTCCEEECCC------------------CTTS
T ss_pred c--ccCCCHHHHHHHHHHHHHHHHhhhhce-eeeEEecccceeecccCCCceEEEeccceeEEccCCCeeeeeeeCcccc
Confidence 4 568999999999999999999999999 99999999999994 5789999999999876543 3457999999
Q ss_pred CccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhh--cccCCCCCchhHHHHHHHHHHhcccCc
Q 014478 152 PPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMD--SALEGHFSNDEGTELVRLASRCLQSEA 229 (424)
Q Consensus 152 aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~li~~cl~~dp 229 (424)
|||++.+..++.++|||||||++|||++|..||........ ...+.. .......+..+|+++.+||.+||+.||
T Consensus 177 APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~~~~----~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP 252 (307)
T d1a06a_ 177 APEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKL----FEQILKAEYEFDSPYWDDISDSAKDFIRHLMEKDP 252 (307)
T ss_dssp CHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH----HHHHHTTCCCCCTTTTTTSCHHHHHHHHHHSCSSG
T ss_pred CcHHHcCCCCCcHHHhhhhhHHHHHHHhCCCCCCCCCHHHH----HHHHhccCCCCCCccccCCCHHHHHHHHHHccCCH
Confidence 99999999999999999999999999999999876532221 111221 122233445678999999999999999
Q ss_pred CCCCCHHHHHHH
Q 014478 230 RERPNAKSLVIS 241 (424)
Q Consensus 230 ~~Rps~~~~~~~ 241 (424)
++|||++|+++|
T Consensus 253 ~~R~s~~eil~h 264 (307)
T d1a06a_ 253 EKRFTCEQALQH 264 (307)
T ss_dssp GGSCCHHHHHHS
T ss_pred hHCcCHHHHhcC
Confidence 999999999865
|
| >d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=5e-52 Score=386.60 Aligned_cols=237 Identities=16% Similarity=0.252 Sum_probs=193.6
Q ss_pred CCCcccceeee--ecceecccccCCC--chhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHhHhc
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESS--DLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLF 77 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~--~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~ 77 (424)
|+||.||++.+ .+..||+|++... ......+.+|+.+|++++|||||+++++|.+.+..+|||||++||+|.+++.
T Consensus 17 G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~iVmEy~~gg~L~~~l~ 96 (322)
T d1s9ja_ 17 GNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLK 96 (322)
T ss_dssp CSSCCEEEEEETTTTEEEEEEEEECCCCTTHHHHHHHHGGGGGGCCCTTBCCEEEEEECSSEEEEEEECCTTEEHHHHHH
T ss_pred CCCeEEEEEEECCCCcEEEEEEEChhhCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEEcCCCCcHHHHHh
Confidence 99999999998 4677888887543 3346788999999999999999999999999999999999999999999997
Q ss_pred cCCCCCCCHHHHHHHHHHHHHHHHHHHhC-CCcccccCCCCCeeecCCCCeEEccccccccCC--CCCccccCccCCCcc
Q 014478 78 HWETQPMKWAMRLRVALYLAQALEYCSSK-GRALYHDLNAYRILFDKDGNPRLSSFGLMKNSR--DGKSYSTNLAFTPPE 154 (424)
Q Consensus 78 ~~~~~~l~~~~~~~i~~qi~~~L~~lH~~-~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~--~~~~~~gt~~y~aPE 154 (424)
+ .+.+++..+..++.|++.||.|||++ + |+||||||+|||++.+|.+||+|||+|+... ......||+.|||||
T Consensus 97 ~--~~~l~~~~~~~~~~qil~aL~yLH~~~~-IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~~~~~~~~GT~~Y~APE 173 (322)
T d1s9ja_ 97 K--AGRIPEQILGKVSIAVIKGLTYLREKHK-IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPE 173 (322)
T ss_dssp H--HSSCCHHHHHHHHHHHHHHHHHHHHHHC-CCCSCCSGGGEEECTTCCEEECCCCCCHHHHHHTC---CCSSCCCCHH
T ss_pred h--cCCCCHHHHHHHHHHHHHHHHHHHHhCC-EEccccCHHHeeECCCCCEEEeeCCCccccCCCccccccCCccccCch
Confidence 5 45799999999999999999999975 8 9999999999999999999999999998643 234568999999999
Q ss_pred ccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhh----------------------------------hhHh
Q 014478 155 YMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKN----------------------------------FLLL 200 (424)
Q Consensus 155 ~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~----------------------------------~~~~ 200 (424)
++.+..++.++|||||||++|||++|+.||............ ....
T Consensus 174 vl~~~~y~~~~DiWSlGvil~ell~G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (322)
T d1s9ja_ 174 RLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLSSYGMDSRPPMAIFEL 253 (322)
T ss_dssp HHHCSCCCTTHHHHHHHHHHHHHHHSSCCSSCCCTTHHHHHC------------------------------CCCCHHHH
T ss_pred HHcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhcCCcccCCcccccccccccccccccccchhHHHH
Confidence 999999999999999999999999999998754211110000 0000
Q ss_pred h---hcccCCCCC-chhHHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 014478 201 M---DSALEGHFS-NDEGTELVRLASRCLQSEARERPNAKSLVIS 241 (424)
Q Consensus 201 ~---~~~~~~~~~-~~~~~~l~~li~~cl~~dp~~Rps~~~~~~~ 241 (424)
. ........+ ...+.++.+||.+||+.||.+|||++|+++|
T Consensus 254 ~~~~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~ta~e~L~H 298 (322)
T d1s9ja_ 254 LDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVH 298 (322)
T ss_dssp HHHHHTSCCCCCCBTTBCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred HhhhhccCCccCccccCCHHHHHHHHHHcCCChhHCcCHHHHhhC
Confidence 0 000111111 2357889999999999999999999999986
|
| >d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: 3-phosphoinositide dependent protein kinase-1 Pdk1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1e-51 Score=377.27 Aligned_cols=232 Identities=16% Similarity=0.155 Sum_probs=197.0
Q ss_pred CCCcccceeee--ecceecccccCCCc----hhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHhH
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESSD----LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKH 75 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~~----~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~ 75 (424)
||||.||.+.+ .+..+|+|++.... ...+.+.+|+++|++++||||+++++++.+++..|||||||+||+|.++
T Consensus 19 G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~ivmEy~~gg~L~~~ 98 (288)
T d1uu3a_ 19 GSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKY 98 (288)
T ss_dssp CSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCSTTBCCEEEEEECSSEEEEEECCCTTEEHHHH
T ss_pred CCCeEEEEEEECCCCCEEEEEEEehHHccCHHHHHHHHHHHHHHHHcCCCCeeEEEEEEEECCEEEEEEEccCCCCHHHh
Confidence 89999999988 46788988875432 2356789999999999999999999999999999999999999999999
Q ss_pred hccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCC------CccccCcc
Q 014478 76 LFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG------KSYSTNLA 149 (424)
Q Consensus 76 l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~------~~~~gt~~ 149 (424)
+.. .+.+++.++..++.|++.||.|||+++ ||||||||+|||++.++.+||+|||+++..... ....||+.
T Consensus 99 ~~~--~~~l~e~~~~~~~~qi~~al~ylH~~~-iiHrDiKp~NIll~~~~~vkl~DFG~a~~~~~~~~~~~~~~~~GT~~ 175 (288)
T d1uu3a_ 99 IRK--IGSFDETCTRFYTAEIVSALEYLHGKG-IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQ 175 (288)
T ss_dssp HHH--HSSCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEECTTSCEEECCCTTCEECC----------CCCCGG
T ss_pred hhc--cCCCCHHHHHHHHHHHHHHHHhhcccc-EEcCcCCccccccCCCceEEecccccceecccCCcccccccccCCcc
Confidence 864 467999999999999999999999999 999999999999999999999999999876432 23569999
Q ss_pred CCCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHHHHHHHHHhcccCc
Q 014478 150 FTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEA 229 (424)
Q Consensus 150 y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp 229 (424)
|||||++.+..++.++|||||||++|||++|+.||......... ..+... ...+|..+++++.+||.+||+.||
T Consensus 176 Y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~~~~~----~~i~~~--~~~~p~~~s~~~~~li~~~L~~dP 249 (288)
T d1uu3a_ 176 YVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIF----QKIIKL--EYDFPEKFFPKARDLVEKLLVLDA 249 (288)
T ss_dssp GCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHH----HHHHTT--CCCCCTTCCHHHHHHHHTTSCSSG
T ss_pred ccCceeeccCCCCcccceehhhHHHHHHhhCCCCCCCcCHHHHH----HHHHcC--CCCCCccCCHHHHHHHHHHccCCH
Confidence 99999999999999999999999999999999998764222111 111111 223566788999999999999999
Q ss_pred CCCCCHHHHHHHH
Q 014478 230 RERPNAKSLVISL 242 (424)
Q Consensus 230 ~~Rps~~~~~~~l 242 (424)
.+|||++|++.+.
T Consensus 250 ~~R~t~~e~~~~~ 262 (288)
T d1uu3a_ 250 TKRLGCEEMEGYG 262 (288)
T ss_dssp GGSTTSGGGTCHH
T ss_pred hHCcCHHHHcCCH
Confidence 9999999987653
|
| >d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Focal adhesion kinase 1 (fak) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4.5e-51 Score=371.65 Aligned_cols=239 Identities=20% Similarity=0.251 Sum_probs=191.6
Q ss_pred CCCcccceeeeec-----ceecccccCC--CchhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHh
Q 014478 2 GGRCSKFSICWFH-----CHLKSSVLES--SDLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAK 74 (424)
Q Consensus 2 G~~g~v~~~~~~~-----~~v~~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~ 74 (424)
|+||.||++.+.. ..|++|++.. .....+.|.+|+++|++++||||++++|++.+ +..++||||+++|+|.+
T Consensus 18 G~fg~Vy~a~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~-~~~~iv~E~~~~g~l~~ 96 (273)
T d1mp8a_ 18 GQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITE-NPVWIIMELCTLGELRS 96 (273)
T ss_dssp CSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECS-SSCEEEEECCTTEEHHH
T ss_pred CCCcEEEEEEEecCCceeEEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEec-CeEEEEEEeccCCcHHh
Confidence 9999999998843 3466666643 33446789999999999999999999999964 56899999999999999
Q ss_pred HhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCC-----CccccCcc
Q 014478 75 HLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG-----KSYSTNLA 149 (424)
Q Consensus 75 ~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~-----~~~~gt~~ 149 (424)
++.. ...++++.+++.++.||+.||.|||+++ +|||||||+||+++.++.+||+|||+++..... ....||+.
T Consensus 97 ~~~~-~~~~l~~~~~~~~~~qi~~gl~ylH~~~-iiHrDlKp~NIll~~~~~~Kl~DfG~a~~~~~~~~~~~~~~~gt~~ 174 (273)
T d1mp8a_ 97 FLQV-RKYSLDLASLILYAYQLSTALAYLESKR-FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIK 174 (273)
T ss_dssp HHHH-TTTTSCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEEEETTEEEECC-------------------CCGG
T ss_pred hhhc-cCCCCCHHHHHHHHHHHHHHhhhhcccC-eeccccchhheeecCCCcEEEccchhheeccCCcceeccceecCcc
Confidence 8765 4567999999999999999999999999 999999999999999999999999999865432 23457899
Q ss_pred CCCccccccCCCCCCcceehhHHHHHHHhh-CCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHHHHHHHHHhcccC
Q 014478 150 FTPPEYMRTGRVTPESVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSE 228 (424)
Q Consensus 150 y~aPE~~~~~~~~~~~Dv~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~d 228 (424)
|+|||++.++.++.++|||||||++|||++ |..|+..... ......+........+..+|+++.+||.+||+.|
T Consensus 175 y~apE~l~~~~~~~~~DiwSlGvil~e~lt~g~~P~~~~~~-----~~~~~~i~~~~~~~~~~~~~~~~~~li~~cl~~d 249 (273)
T d1mp8a_ 175 WMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKN-----NDVIGRIENGERLPMPPNCPPTLYSLMTKCWAYD 249 (273)
T ss_dssp GCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCG-----GGHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSS
T ss_pred cchhhHhccCCCCCccccccchHHHHHHHhcCCCCCCCCCH-----HHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcCCC
Confidence 999999999999999999999999999998 7766655321 2222223333444667788999999999999999
Q ss_pred cCCCCCHHHHHHHHHHHhhh
Q 014478 229 ARERPNAKSLVISLMSLQKE 248 (424)
Q Consensus 229 p~~Rps~~~~~~~l~~~~~~ 248 (424)
|++|||+.+|+++|+.+.++
T Consensus 250 p~~Rps~~ei~~~L~~i~~~ 269 (273)
T d1mp8a_ 250 PSRRPRFTELKAQLSTILEE 269 (273)
T ss_dssp GGGSCCHHHHHHHHHHHHHH
T ss_pred HhHCcCHHHHHHHHHHHHHH
Confidence 99999999999999988765
|
| >d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]
Probab=100.00 E-value=6.6e-51 Score=382.16 Aligned_cols=236 Identities=16% Similarity=0.139 Sum_probs=199.3
Q ss_pred CCCcccceeee--ecceecccccCCCc-hhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHhHhcc
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESSD-LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFH 78 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~ 78 (424)
||||.||++.+ .+..|++|++.... .....+.+|+++|++++|||||++++++.+++..|||||||+||+|.+++..
T Consensus 40 G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~ivmE~~~gg~L~~~~~~ 119 (352)
T d1koba_ 40 GAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEFLSGGELFDRIAA 119 (352)
T ss_dssp ETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEEECCCCCBHHHHTTC
T ss_pred CCCeEEEEEEECCCCCEEEEEEECCcchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEEcCCCChHHHHHHh
Confidence 89999999987 57788988876544 4466788999999999999999999999999999999999999999998754
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeec--CCCCeEEccccccccCCCCC---ccccCccCCCc
Q 014478 79 WETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFD--KDGNPRLSSFGLMKNSRDGK---SYSTNLAFTPP 153 (424)
Q Consensus 79 ~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~--~~~~~kl~Dfg~~~~~~~~~---~~~gt~~y~aP 153 (424)
.+.++++.+++.|+.||+.||.|||++| ||||||||+|||++ .++.+||+|||+++...... ...||+.||||
T Consensus 120 -~~~~l~e~~~~~i~~qi~~aL~ylH~~~-iiHRDiKp~NILl~~~~~~~vkL~DFGla~~~~~~~~~~~~~gt~~y~aP 197 (352)
T d1koba_ 120 -EDYKMSEAEVINYMRQACEGLKHMHEHS-IVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVKVTTATAEFAAP 197 (352)
T ss_dssp -TTCCBCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEESSTTCCCEEECCCTTCEECCTTSCEEEECSSGGGCCH
T ss_pred -cCCCCCHHHHHHHHHHHHHHHHHHHHCC-eeecccccccccccccCCCeEEEeecccceecCCCCceeeccCcccccCH
Confidence 3557999999999999999999999999 99999999999997 67899999999998876543 35789999999
Q ss_pred cccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHHHHHHHHHhcccCcCCCC
Q 014478 154 EYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERP 233 (424)
Q Consensus 154 E~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rp 233 (424)
|++.+..++.++|||||||++|+|++|..||........-. ................+++++.+||.+||+.||.+||
T Consensus 198 E~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~--~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~ 275 (352)
T d1koba_ 198 EIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQ--NVKRCDWEFDEDAFSSVSPEAKDFIKNLLQKEPRKRL 275 (352)
T ss_dssp HHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHH--HHHHCCCCCCSSTTTTSCHHHHHHHHTTSCSSGGGSC
T ss_pred HHHcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHHHH--HHHhCCCCCCcccccCCCHHHHHHHHHHccCChhHCc
Confidence 99999999999999999999999999999987642221111 1111112223334456789999999999999999999
Q ss_pred CHHHHHHH
Q 014478 234 NAKSLVIS 241 (424)
Q Consensus 234 s~~~~~~~ 241 (424)
|++++++|
T Consensus 276 s~~eil~H 283 (352)
T d1koba_ 276 TVHDALEH 283 (352)
T ss_dssp CHHHHHTS
T ss_pred CHHHHhcC
Confidence 99999875
|
| >d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: Caenorhabditis elegans, pjk4 [TaxId: 6239]
Probab=100.00 E-value=6.7e-51 Score=381.83 Aligned_cols=234 Identities=15% Similarity=0.154 Sum_probs=197.8
Q ss_pred CCCcccceeee--ecceecccccCCCc-hhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHhHhcc
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESSD-LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFH 78 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~ 78 (424)
||||.||++.+ .+..|++|++.... ...+.+.+|+++|++++|||||++++++.+++..+||||||+||+|.+++.+
T Consensus 37 G~fg~Vy~~~~~~~g~~vAvK~i~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~ivmE~~~gg~L~~~l~~ 116 (350)
T d1koaa2 37 GAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVAD 116 (350)
T ss_dssp ETTEEEEEEEETTTTEEEEEEEECCCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEEETTEEEEEECCCCSCBHHHHHTC
T ss_pred CcCeEEEEEEECCCCCEEEEEEEcccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEEcCCCCCHHHHHHh
Confidence 89999999987 47788988886544 4467889999999999999999999999999999999999999999999864
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeec--CCCCeEEccccccccCCCCC---ccccCccCCCc
Q 014478 79 WETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFD--KDGNPRLSSFGLMKNSRDGK---SYSTNLAFTPP 153 (424)
Q Consensus 79 ~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~--~~~~~kl~Dfg~~~~~~~~~---~~~gt~~y~aP 153 (424)
..+++++.++..++.||+.||.|||+++ ||||||||+|||++ .++.+||+|||+++...... ...||+.||||
T Consensus 117 -~~~~l~e~~~~~i~~qi~~aL~ylH~~~-iiHrDiKp~NIll~~~~~~~vkL~DFG~a~~~~~~~~~~~~~gT~~Y~aP 194 (350)
T d1koaa2 117 -EHNKMSEDEAVEYMRQVCKGLCHMHENN-YVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTTGTAEFAAP 194 (350)
T ss_dssp -TTSCBCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEESSTTSCCEEECCCTTCEECCTTSCEEEECSCTTTCCH
T ss_pred -hcCCCCHHHHHHHHHHHHHHHHHHHhcC-CeeeeechhHeeeccCCCCeEEEeecchheecccccccceecCcccccCH
Confidence 3557999999999999999999999999 99999999999995 46789999999998765443 35789999999
Q ss_pred cccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhc--ccCCCCCchhHHHHHHHHHHhcccCcCC
Q 014478 154 EYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDS--ALEGHFSNDEGTELVRLASRCLQSEARE 231 (424)
Q Consensus 154 E~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~li~~cl~~dp~~ 231 (424)
|++.+..++.++|||||||++|+|++|+.||........ ...+... .........+++++.+||.+||+.||++
T Consensus 195 Ev~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~----~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~ 270 (350)
T d1koaa2 195 EVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDET----LRNVKSCDWNMDDSAFSGISEDGKDFIRKLLLADPNT 270 (350)
T ss_dssp HHHHTCCBCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHH----HHHHHHTCCCSCCGGGGGCCHHHHHHHHHHCCSSGGG
T ss_pred HHHcCCCCChhHhhhhhhHHHHHHHhCCCCCCCCCHHHH----HHHHHhCCCCCCcccccCCCHHHHHHHHHHccCChhH
Confidence 999998999999999999999999999999876422211 1111111 1122223457889999999999999999
Q ss_pred CCCHHHHHHH
Q 014478 232 RPNAKSLVIS 241 (424)
Q Consensus 232 Rps~~~~~~~ 241 (424)
|||++++++|
T Consensus 271 R~t~~eil~h 280 (350)
T d1koaa2 271 RMTIHQALEH 280 (350)
T ss_dssp SCCHHHHHHS
T ss_pred CcCHHHHhcC
Confidence 9999999875
|
| >d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Hepatocyte growth factor receptor, c-MET species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.9e-50 Score=371.29 Aligned_cols=241 Identities=18% Similarity=0.254 Sum_probs=200.8
Q ss_pred CCCcccceeeeecc-----eecccccCC--CchhhhHHHHHHHHHhcCCCcCcceeEEEEEeC-CeeeEEEecCCCCCHH
Q 014478 2 GGRCSKFSICWFHC-----HLKSSVLES--SDLGETLNLEEAKAVGNLRSERLANLIGCCYEA-DERLLVAEFMPNETLA 73 (424)
Q Consensus 2 G~~g~v~~~~~~~~-----~v~~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~-~~~~lv~e~~~~gsL~ 73 (424)
||||.||++.+... .||+|++.. +....+.|.+|+++|++++||||++++|++... ...++|||||++|+|.
T Consensus 38 G~fg~Vyk~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~~lv~E~~~~g~l~ 117 (311)
T d1r0pa_ 38 GHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLR 117 (311)
T ss_dssp ETTEEEEEEEECC----CEEEEEEEECCCCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEETTTEEEEEEECCTTCBHH
T ss_pred cCCeEEEEEEEECCCCEEEEEEEEEECcccCHHHHHHHHHHHHHHHhCCCCCEeEEeEEEEecCCceEEEEEEeecCchh
Confidence 89999999988332 477777753 444567899999999999999999999998764 5789999999999999
Q ss_pred hHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCC--------Cccc
Q 014478 74 KHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG--------KSYS 145 (424)
Q Consensus 74 ~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~--------~~~~ 145 (424)
+++.. ....+++.++++++.|++.||.|||+++ |+||||||+|||++.++.+||+|||+++..... ....
T Consensus 118 ~~~~~-~~~~~~~~~~~~i~~qia~gL~~lH~~~-iiHrDLK~~NILl~~~~~~kL~DFG~~~~~~~~~~~~~~~~~~~~ 195 (311)
T d1r0pa_ 118 NFIRN-ETHNPTVKDLIGFGLQVAKGMKFLASKK-FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAK 195 (311)
T ss_dssp HHHHC-TTCCCBHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEECTTCCEEECSSGGGCCTTTTTCCCTTCTTCSS
T ss_pred hhhcc-ccccchHHHHHHHHHHHHHhhhhhcccC-cccCCccHHhEeECCCCCEEEecccchhhccccccccceeccccc
Confidence 99865 4567889999999999999999999999 999999999999999999999999999865432 2245
Q ss_pred cCccCCCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHHHHHHHHHhc
Q 014478 146 TNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCL 225 (424)
Q Consensus 146 gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl 225 (424)
||+.|+|||.+..+.++.++||||||+++|||+||..||.... ........+....+...|..+++++.+||.+||
T Consensus 196 gt~~y~aPE~~~~~~~~~ksDI~SfGivl~El~t~~~p~~~~~----~~~~~~~~i~~g~~~~~p~~~~~~l~~li~~cl 271 (311)
T d1r0pa_ 196 LPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDV----NTFDITVYLLQGRRLLQPEYCPDPLYEVMLKCW 271 (311)
T ss_dssp CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCC----------CHHHHHTTCCCCCCTTCCHHHHHHHHHHT
T ss_pred ccccccChHHHhcCCCCChhHhhhhHHHHHHHHHCCCCCCCCC----CHHHHHHHHHcCCCCCCcccCcHHHHHHHHHHc
Confidence 7899999999999999999999999999999999887776542 112222222233444566778899999999999
Q ss_pred ccCcCCCCCHHHHHHHHHHHhhh
Q 014478 226 QSEARERPNAKSLVISLMSLQKE 248 (424)
Q Consensus 226 ~~dp~~Rps~~~~~~~l~~~~~~ 248 (424)
+.||++|||+.||+++|+.+.+.
T Consensus 272 ~~dP~~RPs~~ei~~~L~~i~~~ 294 (311)
T d1r0pa_ 272 HPKAEMRPSFSELVSRISAIFST 294 (311)
T ss_dssp CSSGGGSCCHHHHHHHHHHHHHT
T ss_pred CCCHhHCcCHHHHHHHHHHHHHh
Confidence 99999999999999999998764
|
| >d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: EGF receptor tyrosine kinase, Erbb-1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.1e-50 Score=374.95 Aligned_cols=239 Identities=16% Similarity=0.268 Sum_probs=198.1
Q ss_pred CCCcccceeeee--cc----eecccccCCC--chhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHH
Q 014478 2 GGRCSKFSICWF--HC----HLKSSVLESS--DLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLA 73 (424)
Q Consensus 2 G~~g~v~~~~~~--~~----~v~~~~~~~~--~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~ 73 (424)
||||.||++.+. +. .|++|++... ....+.|.+|+++|++++|||||+++|+|.++ ..+++||++.+|+|.
T Consensus 20 G~fG~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~-~~~~v~e~~~~~~l~ 98 (317)
T d1xkka_ 20 GAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS-TVQLITQLMPFGCLL 98 (317)
T ss_dssp CSSEEEEEEEECC----CCEEEEEEEECC----CTHHHHHHHHHHHHHCCCTTBCCEEEEEESS-SEEEEEECCTTCBHH
T ss_pred CCCeEEEEEEEcCCCCEEEEEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecC-CeeEEEEeccCCccc
Confidence 999999999884 22 3666666432 33467899999999999999999999999875 567889999999999
Q ss_pred hHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCCC------ccccC
Q 014478 74 KHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGK------SYSTN 147 (424)
Q Consensus 74 ~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~~------~~~gt 147 (424)
+++.. ....+++..+++++.||+.||.|||+++ ||||||||+|||++.++.+||+|||+++...... ...||
T Consensus 99 ~~~~~-~~~~~~~~~~~~i~~qi~~gl~yLH~~~-iiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~~~~~~~~~~gt 176 (317)
T d1xkka_ 99 DYVRE-HKDNIGSQYLLNWCVQIAKGMNYLEDRR-LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 176 (317)
T ss_dssp HHHHH-TSSSCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEEEETTEEEECCCSHHHHTTTTCC--------CC
T ss_pred ccccc-cccCCCHHHHHHHHHHHHHHHHHHHHcC-cccCcchhhcceeCCCCCeEeeccccceecccccccccccccccC
Confidence 98865 4668999999999999999999999999 9999999999999999999999999998764322 23578
Q ss_pred ccCCCccccccCCCCCCcceehhHHHHHHHhh-CCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHHHHHHHHHhcc
Q 014478 148 LAFTPPEYMRTGRVTPESVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQ 226 (424)
Q Consensus 148 ~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~ 226 (424)
+.|||||++.++.++.++|||||||++|||+| |..||.... ...+...+....+...|..+++++.+|+.+||+
T Consensus 177 ~~y~APE~l~~~~~~~~sDvwS~Gvil~el~t~g~~p~~~~~-----~~~~~~~i~~~~~~~~p~~~~~~~~~li~~cl~ 251 (317)
T d1xkka_ 177 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIP-----ASEISSILEKGERLPQPPICTIDVYMIMVKCWM 251 (317)
T ss_dssp TTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSC-----GGGHHHHHHHTCCCCCCTTBCHHHHHHHHHHTC
T ss_pred ccccChHHHhcCCCChhhhhhhHHHHHHHHHHCCCCCCCCCC-----HHHHHHHHHcCCCCCCCcccCHHHHHHHHHhCC
Confidence 99999999999999999999999999999998 666655432 222333444445556677889999999999999
Q ss_pred cCcCCCCCHHHHHHHHHHHhhh
Q 014478 227 SEARERPNAKSLVISLMSLQKE 248 (424)
Q Consensus 227 ~dp~~Rps~~~~~~~l~~~~~~ 248 (424)
.||.+|||+.+++.+|..+.+.
T Consensus 252 ~dP~~RPs~~eil~~l~~~~~~ 273 (317)
T d1xkka_ 252 IDADSRPKFRELIIEFSKMARD 273 (317)
T ss_dssp SSGGGSCCHHHHHHHHHHHHHS
T ss_pred CChhhCcCHHHHHHHHHHHHhC
Confidence 9999999999999999887654
|
| >d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tie2 kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3e-50 Score=372.53 Aligned_cols=241 Identities=18% Similarity=0.214 Sum_probs=199.1
Q ss_pred CCCcccceeeeecc----eecccccCC--CchhhhHHHHHHHHHhcC-CCcCcceeEEEEEeCCeeeEEEecCCCCCHHh
Q 014478 2 GGRCSKFSICWFHC----HLKSSVLES--SDLGETLNLEEAKAVGNL-RSERLANLIGCCYEADERLLVAEFMPNETLAK 74 (424)
Q Consensus 2 G~~g~v~~~~~~~~----~v~~~~~~~--~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~ 74 (424)
|+||.||++.+... .|++|++.. .....+.|.+|+++|.++ +|||||+++|+|.+++..++||||++||+|.+
T Consensus 21 G~fg~Vy~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~iV~ey~~~g~L~~ 100 (309)
T d1fvra_ 21 GNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLD 100 (309)
T ss_dssp GGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEEEEECCCTTCBHHH
T ss_pred CCCcEEEEEEECCCCeEEEEEEEEECcccChHHHHHHHHHHHHHHhccCCCCEeeEEEEEecCCeeEEEEEecCCCcHHH
Confidence 89999999998543 466666532 334567899999999999 79999999999999999999999999999999
Q ss_pred HhccC--------------CCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCC
Q 014478 75 HLFHW--------------ETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRD 140 (424)
Q Consensus 75 ~l~~~--------------~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~ 140 (424)
++... ....+++.+++.++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++....
T Consensus 101 ~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~~lH~~~-iiHrDlkp~NIL~~~~~~~kl~DfG~a~~~~~ 179 (309)
T d1fvra_ 101 FLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQ-FIHRDLAARNILVGENYVAKIADFGLSRGQEV 179 (309)
T ss_dssp HHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEECGGGCEEECCTTCEESSCE
T ss_pred HHhhccccccchhhhccccccCCCCHHHHHHHHHHHHHHHHhhhcCC-ccccccccceEEEcCCCceEEccccccccccc
Confidence 99642 2467999999999999999999999999 99999999999999999999999999986553
Q ss_pred C---CccccCccCCCccccccCCCCCCcceehhHHHHHHHhhCCCC-CCchhhHHHhhhhhhHhhhcccCCCCCchhHHH
Q 014478 141 G---KSYSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHI-PPSHALDLIRSKNFLLLMDSALEGHFSNDEGTE 216 (424)
Q Consensus 141 ~---~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (424)
. ....||..|+|||.+.++.++.++|||||||++|||++|..| +.... ...+...+....+...+..++++
T Consensus 180 ~~~~~~~~gt~~y~aPE~l~~~~~~~~sDvwSfGvil~ell~~~~~p~~~~~-----~~~~~~~i~~~~~~~~~~~~~~~ 254 (309)
T d1fvra_ 180 YVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMT-----CAELYEKLPQGYRLEKPLNCDDE 254 (309)
T ss_dssp ECCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCC-----HHHHHHHGGGTCCCCCCTTBCHH
T ss_pred cccccceecCCcccchHHhccCCCCccceeehhHHHHHHHHhcCCCCCCCCC-----HHHHHHHHHhcCCCCCCccCCHH
Confidence 2 244689999999999999999999999999999999998754 43321 12222233334455667788999
Q ss_pred HHHHHHHhcccCcCCCCCHHHHHHHHHHHhhh
Q 014478 217 LVRLASRCLQSEARERPNAKSLVISLMSLQKE 248 (424)
Q Consensus 217 l~~li~~cl~~dp~~Rps~~~~~~~l~~~~~~ 248 (424)
+.+||.+||+.||++|||+++|+++|+++.++
T Consensus 255 ~~~li~~cl~~dP~~RPs~~eil~~L~~i~~~ 286 (309)
T d1fvra_ 255 VYDLMRQCWREKPYERPSFAQILVSLNRMLEE 286 (309)
T ss_dssp HHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHS
T ss_pred HHHHHHHHcCCChhHCcCHHHHHHHHHHHHhc
Confidence 99999999999999999999999999998765
|
| >d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Musk tyrosine kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=2.7e-50 Score=371.62 Aligned_cols=239 Identities=20% Similarity=0.236 Sum_probs=199.6
Q ss_pred CCCcccceeeeec-------ceecccccCCCc--hhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCH
Q 014478 2 GGRCSKFSICWFH-------CHLKSSVLESSD--LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETL 72 (424)
Q Consensus 2 G~~g~v~~~~~~~-------~~v~~~~~~~~~--~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL 72 (424)
||||.||++.+.+ ..||+|++.... ...+.|.+|+++|++++||||++++++|...+..++||||+++|+|
T Consensus 24 G~fG~Vy~a~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~v~e~~~~g~L 103 (301)
T d1lufa_ 24 GAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVGKPMCLLFEYMAYGDL 103 (301)
T ss_dssp CSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEEECCTTCBH
T ss_pred CCCeEEEEEEECCCccCCCCeEEEEEEEChhcChHHHHHHHHHHHHHHhcCCCCcccceeeeccCCceEEEEEecCCCcH
Confidence 9999999999854 568888875433 3467899999999999999999999999999999999999999999
Q ss_pred HhHhccCC----------------------CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEc
Q 014478 73 AKHLFHWE----------------------TQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLS 130 (424)
Q Consensus 73 ~~~l~~~~----------------------~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~ 130 (424)
.+++.... ...+++.+++.++.|++.||.|||+++ +|||||||+|||++.++.+||+
T Consensus 104 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~ylH~~~-ivHrDlKp~NILld~~~~~Kl~ 182 (301)
T d1lufa_ 104 NEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERK-FVHRDLATRNCLVGENMVVKIA 182 (301)
T ss_dssp HHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEECGGGCEEEC
T ss_pred HHHHHhcCccccccccccccchhhhccccCCCCCCHHHHHHHHHHHHHHhhhcccCC-eEeeEEcccceEECCCCcEEEc
Confidence 99985421 235889999999999999999999999 9999999999999999999999
Q ss_pred cccccccCCCC------CccccCccCCCccccccCCCCCCcceehhHHHHHHHhhCCC-CCCchhhHHHhhhhhhHhhhc
Q 014478 131 SFGLMKNSRDG------KSYSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKH-IPPSHALDLIRSKNFLLLMDS 203 (424)
Q Consensus 131 Dfg~~~~~~~~------~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~-~~~~~~~~~~~~~~~~~~~~~ 203 (424)
|||+++..... ....||+.|+|||.+.+..++.++|||||||++|||++|.. |+..... ......+..
T Consensus 183 DFGls~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~t~ksDVwS~Gvvl~ell~~~~~p~~~~~~-----~e~~~~v~~ 257 (301)
T d1lufa_ 183 DFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMAH-----EEVIYYVRD 257 (301)
T ss_dssp CCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCH-----HHHHHHHHT
T ss_pred cchhheeccCCccccccCCCCcCcCcCCHHHHccCCCChhhhhccchhhHHHHHccCCCCCCCCCH-----HHHHHHHHc
Confidence 99998754322 23467899999999999999999999999999999999975 4443311 112222333
Q ss_pred ccCCCCCchhHHHHHHHHHHhcccCcCCCCCHHHHHHHHHHHh
Q 014478 204 ALEGHFSNDEGTELVRLASRCLQSEARERPNAKSLVISLMSLQ 246 (424)
Q Consensus 204 ~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~~~~~l~~~~ 246 (424)
......|..+++++.+|+.+||+.||++|||+.+|++.|+++.
T Consensus 258 ~~~~~~p~~~~~~~~~li~~cl~~~P~~RPt~~ev~~~L~~i~ 300 (301)
T d1lufa_ 258 GNILACPENCPLELYNLMRLCWSKLPADRPSFCSIHRILQRMC 300 (301)
T ss_dssp TCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTT
T ss_pred CCCCCCCccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhc
Confidence 3445567788899999999999999999999999999998864
|
| >d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Death-associated protein kinase, Dap species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.6e-50 Score=371.70 Aligned_cols=233 Identities=13% Similarity=0.131 Sum_probs=194.8
Q ss_pred CCCcccceeee--ecceecccccCCCc-------hhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCH
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESSD-------LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETL 72 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~~-------~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL 72 (424)
|+||.||++.+ .+..+|+|++.... ...+.|.+|+++|++++|||||++++++.+++..|||||||+||+|
T Consensus 21 G~fg~Vy~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~iv~E~~~gg~L 100 (293)
T d1jksa_ 21 GQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGEL 100 (293)
T ss_dssp CSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEECCCSCBH
T ss_pred CCCeEEEEEEECCCCCEEEEEEEEhhhcchhhhhHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEEcCCCccc
Confidence 99999999998 46788888774322 2356899999999999999999999999999999999999999999
Q ss_pred HhHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCC----CeEEccccccccCCCC---Cccc
Q 014478 73 AKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDG----NPRLSSFGLMKNSRDG---KSYS 145 (424)
Q Consensus 73 ~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~----~~kl~Dfg~~~~~~~~---~~~~ 145 (424)
.+++.. ..++++.++..++.|++.||.|||+++ |+||||||+|||++.++ .+||+|||+++..... ....
T Consensus 101 ~~~i~~--~~~l~~~~~~~~~~qi~~al~yLH~~~-ivHrDiKp~Nill~~~~~~~~~vkl~DfG~a~~~~~~~~~~~~~ 177 (293)
T d1jksa_ 101 FDFLAE--KESLTEEEATEFLKQILNGVYYLHSLQ-IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF 177 (293)
T ss_dssp HHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEESCSSSSSCCEEECCCTTCEECTTSCBCSCCC
T ss_pred cchhcc--ccccchhHHHHHHHHHHHHHHhhhhcc-eeecccccceEEEecCCCcccceEecchhhhhhcCCCccccccC
Confidence 999965 457999999999999999999999999 99999999999998776 4999999999876543 3457
Q ss_pred cCccCCCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhcc--cCCCCCchhHHHHHHHHHH
Q 014478 146 TNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSA--LEGHFSNDEGTELVRLASR 223 (424)
Q Consensus 146 gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~li~~ 223 (424)
||+.|||||++.+..++.++|||||||++|||++|+.||........ ...+.... .....+..+++++.+||.+
T Consensus 178 ~t~~y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~~~~----~~~i~~~~~~~~~~~~~~~s~~~~~li~~ 253 (293)
T d1jksa_ 178 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQET----LANVSAVNYEFEDEYFSNTSALAKDFIRR 253 (293)
T ss_dssp CCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH----HHHHHTTCCCCCHHHHTTSCHHHHHHHHT
T ss_pred CCCcccCHHHHcCCCCCCcccchhhhHHHHHHHcCCCCCCCCCHHHH----HHHHHhcCCCCCchhcCCCCHHHHHHHHH
Confidence 89999999999988899999999999999999999999876422211 11111111 1111223567889999999
Q ss_pred hcccCcCCCCCHHHHHHH
Q 014478 224 CLQSEARERPNAKSLVIS 241 (424)
Q Consensus 224 cl~~dp~~Rps~~~~~~~ 241 (424)
||+.||++|||+++++++
T Consensus 254 ~L~~dP~~R~s~~eil~h 271 (293)
T d1jksa_ 254 LLVKDPKKRMTIQDSLQH 271 (293)
T ss_dssp TSCSSGGGSCCHHHHHHS
T ss_pred HccCChhHCcCHHHHhcC
Confidence 999999999999999865
|
| >d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: cAMP-dependent PK, catalytic subunit species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=9e-50 Score=369.41 Aligned_cols=231 Identities=19% Similarity=0.206 Sum_probs=198.9
Q ss_pred CCCcccceeee--ecceecccccCCCc----hhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHhH
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESSD----LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKH 75 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~~----~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~ 75 (424)
|+||.||++.+ .+..+|+|++.... ...+.+.+|+.+|++++||||+++++++.+++..|+|||||+||+|..+
T Consensus 15 G~fg~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~ivmE~~~gg~l~~~ 94 (316)
T d1fota_ 15 GSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMIMDYIEGGELFSL 94 (316)
T ss_dssp CSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEEECCCCSCBHHHH
T ss_pred CcCcEEEEEEECCCCCEEEEEEEchHHccCHHHHHHHHHHHHHHHhccCcChhheeeeEeeCCeeeeEeeecCCcccccc
Confidence 89999999987 47788988875432 3356889999999999999999999999999999999999999999999
Q ss_pred hccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCC-CccccCccCCCcc
Q 014478 76 LFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG-KSYSTNLAFTPPE 154 (424)
Q Consensus 76 l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~-~~~~gt~~y~aPE 154 (424)
+.. ...+++..+..++.||+.||.|||+++ ||||||||+|||++.+|.+||+|||+++..... ....||+.|||||
T Consensus 95 ~~~--~~~~~~~~~~~~~~qi~~al~~lH~~~-iiHrDiKp~NILl~~~g~vkL~DFG~a~~~~~~~~~~~Gt~~Y~APE 171 (316)
T d1fota_ 95 LRK--SQRFPNPVAKFYAAEVCLALEYLHSKD-IIYRDLKPENILLDKNGHIKITDFGFAKYVPDVTYTLCGTPDYIAPE 171 (316)
T ss_dssp HHH--TSSCCHHHHHHHHHHHHHHHHHHHTTT-EECCCCCGGGEEECTTSCEEECCCSSCEECSSCBCCCCSCTTTCCHH
T ss_pred ccc--cccccccHHHHHHHHHHHhhhhhccCc-EEccccCchheeEcCCCCEEEecCccceEeccccccccCcccccCHH
Confidence 875 567899999999999999999999999 999999999999999999999999999876544 4567999999999
Q ss_pred ccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHHHHHHHHHhcccCcCCCC-
Q 014478 155 YMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERP- 233 (424)
Q Consensus 155 ~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rp- 233 (424)
++.+..++.++|||||||++|||++|+.||......... ..+... ....|..+++++.+++.+||..||.+|+
T Consensus 172 ~l~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~----~~i~~~--~~~~p~~~s~~~~~li~~~L~~dp~~R~~ 245 (316)
T d1fota_ 172 VVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTY----EKILNA--ELRFPPFFNEDVKDLLSRLITRDLSQRLG 245 (316)
T ss_dssp HHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHH----HHHHHC--CCCCCTTSCHHHHHHHHHHTCSCTTTCTT
T ss_pred HHcCCCCCchhhccccchhHHHHHhCCCCCCCcCHHHHH----HHHHcC--CCCCCCCCCHHHHHHHHHHhhhCHHhccc
Confidence 999889999999999999999999999998765322211 111221 2245667788999999999999999995
Q ss_pred ----CHHHHHHH
Q 014478 234 ----NAKSLVIS 241 (424)
Q Consensus 234 ----s~~~~~~~ 241 (424)
|++++++|
T Consensus 246 ~~r~t~~~il~H 257 (316)
T d1fota_ 246 NLQNGTEDVKNH 257 (316)
T ss_dssp SSTTTTHHHHTS
T ss_pred cchhhHHHHHcC
Confidence 89999875
|
| >d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Activated CDC42 kinase 1, ACK1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.8e-50 Score=365.48 Aligned_cols=237 Identities=18% Similarity=0.216 Sum_probs=192.1
Q ss_pred CCCcccceeeeecc-----eecccccCCC----chhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCH
Q 014478 2 GGRCSKFSICWFHC-----HLKSSVLESS----DLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETL 72 (424)
Q Consensus 2 G~~g~v~~~~~~~~-----~v~~~~~~~~----~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL 72 (424)
||||.||++.+... .||+|++... ....+.|.+|+++|++++||||++++|+|.+ ...++||||+++|+|
T Consensus 19 G~fg~Vy~~~~~~~~~~~~~vAiK~l~~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~~~g~~~~-~~~~lv~e~~~~~~l 97 (273)
T d1u46a_ 19 GSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLT-PPMKMVTELAPLGSL 97 (273)
T ss_dssp ---CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEEECCTTCBH
T ss_pred CCCeEEEEEEEECCCCcEEEEEEEEEChhhcCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEee-cchheeeeeecCcch
Confidence 89999999987432 4677777543 2345689999999999999999999999976 467899999999999
Q ss_pred HhHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCCC-------ccc
Q 014478 73 AKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGK-------SYS 145 (424)
Q Consensus 73 ~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~~-------~~~ 145 (424)
.+++.. ....+++..++.++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++...... ...
T Consensus 98 ~~~~~~-~~~~l~~~~~~~~~~qi~~gl~ylH~~~-iiHrDikp~NIll~~~~~vkl~DfGl~~~~~~~~~~~~~~~~~~ 175 (273)
T d1u46a_ 98 LDRLRK-HQGHFLLGTLSRYAVQVAEGMGYLESKR-FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRK 175 (273)
T ss_dssp HHHHHH-HGGGSCHHHHHHHHHHHHHHHHHHHHTT-EECSCCCGGGEEEEETTEEEECCCTTCEECCC-CCEEEC-----
T ss_pred hhhhhc-ccCCCCHHHHHHHHHHHHHHHHHhhhCC-EeeeeecHHHhccccccceeeccchhhhhcccCCCcceecCccc
Confidence 998764 3457999999999999999999999999 9999999999999999999999999998765432 235
Q ss_pred cCccCCCccccccCCCCCCcceehhHHHHHHHhh-CCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHHHHHHHHHh
Q 014478 146 TNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRC 224 (424)
Q Consensus 146 gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c 224 (424)
||..|+|||++.+..++.++|||||||++|||+| |..||....... ....+.......+.+..+|+++.++|.+|
T Consensus 176 ~~~~~~aPE~~~~~~~~~~~Di~S~Gvil~emlt~G~~Pf~~~~~~~----~~~~i~~~~~~~~~~~~~~~~l~~li~~c 251 (273)
T d1u46a_ 176 VPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQ----ILHKIDKEGERLPRPEDCPQDIYNVMVQC 251 (273)
T ss_dssp CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHHH----HHHHHHTSCCCCCCCTTCCHHHHHHHHHH
T ss_pred cCcccCCHHHHhCCCCCcchhhhhhHHHHHHHHhCCCCCCCCcCHHH----HHHHHHhCCCCCCCcccccHHHHHHHHHH
Confidence 6789999999999999999999999999999998 788876542221 22233334444556677889999999999
Q ss_pred cccCcCCCCCHHHHHHHHHHH
Q 014478 225 LQSEARERPNAKSLVISLMSL 245 (424)
Q Consensus 225 l~~dp~~Rps~~~~~~~l~~~ 245 (424)
|+.||++|||+.+|++.|.+.
T Consensus 252 l~~dp~~RPt~~ei~~~L~~~ 272 (273)
T d1u46a_ 252 WAHKPEDRPTFVALRDFLLEA 272 (273)
T ss_dssp TCSSGGGSCCHHHHHHHHHHH
T ss_pred cCCChhHCcCHHHHHHHHHhc
Confidence 999999999999999888764
|
| >d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Pkb kinase (Akt-2) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=8.9e-50 Score=371.93 Aligned_cols=231 Identities=18% Similarity=0.239 Sum_probs=198.8
Q ss_pred CCCcccceeee--ecceecccccCCCc----hhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHhH
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESSD----LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKH 75 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~~----~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~ 75 (424)
|+||.||++.. .+..+|+|++.... ...+.+.+|+.+|++++||||+++++++.+++..|+|||||+||+|.++
T Consensus 16 G~fg~V~~~~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~iv~ey~~gg~L~~~ 95 (337)
T d1o6la_ 16 GTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFH 95 (337)
T ss_dssp CSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEEEECCTTCBHHHH
T ss_pred CcCeEEEEEEECCCCCEEEEEEEchhhccCHHHHHHHHHHHHHHHhCCCCCEEEEEeeeccccccccceeccCCCchhhh
Confidence 89999999987 57788888875432 2356788999999999999999999999999999999999999999999
Q ss_pred hccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCC----CccccCccCC
Q 014478 76 LFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG----KSYSTNLAFT 151 (424)
Q Consensus 76 l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~----~~~~gt~~y~ 151 (424)
+.. .+.+++..+..++.||+.||.|||+++ ||||||||+|||++.+|.+||+|||+++..... ....||+.||
T Consensus 96 ~~~--~~~~~e~~~~~~~~qil~al~ylH~~~-iiHRDlKP~NILl~~~g~vkl~DFG~a~~~~~~~~~~~~~~GT~~Y~ 172 (337)
T d1o6la_ 96 LSR--ERVFTEERARFYGAEIVSALEYLHSRD-VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYL 172 (337)
T ss_dssp HHH--HSCCCHHHHHHHHHHHHHHHHHHHHTT-CBCCCCCGGGEEECTTSCEEECCCTTCBCSCCTTCCBCCCEECGGGC
T ss_pred hhc--ccCCcHHHHHHHHHHHhhhhhhhhhcC-ccccccCHHHeEecCCCCEEEeecccccccccCCcccccceeCHHHh
Confidence 975 567999999999999999999999999 999999999999999999999999999865432 3467999999
Q ss_pred CccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHHHHHHHHHhcccCcCC
Q 014478 152 PPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARE 231 (424)
Q Consensus 152 aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~ 231 (424)
|||++.+..++.++|||||||++|||++|+.||.......... ..... ...+|..+++++.+||.+||+.||.+
T Consensus 173 aPE~~~~~~y~~~~DiwSlGvilyeml~G~~pf~~~~~~~~~~----~i~~~--~~~~p~~~s~~~~dli~~~L~~dP~~ 246 (337)
T d1o6la_ 173 APEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFE----LILME--EIRFPRTLSPEAKSLLAGLLKKDPKQ 246 (337)
T ss_dssp CGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHH----HHHHC--CCCCCTTSCHHHHHHHHHHTCSSTTT
T ss_pred hhhhccCCCCChhhcccchhhHHHHHHHCCCCCCCcCHHHHHH----HHhcC--CCCCCccCCHHHHHHHHhhccCCchh
Confidence 9999999999999999999999999999999888753322211 11111 23456778899999999999999999
Q ss_pred CCC-----HHHHHHH
Q 014478 232 RPN-----AKSLVIS 241 (424)
Q Consensus 232 Rps-----~~~~~~~ 241 (424)
||+ ++++++|
T Consensus 247 R~~~~~~~~~eil~H 261 (337)
T d1o6la_ 247 RLGGGPSDAKEVMEH 261 (337)
T ss_dssp STTCSTTTHHHHHTS
T ss_pred hcccccccHHHHHcC
Confidence 995 7888765
|
| >d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Vascular endothelial growth factor receptor 2 (kdr) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=9.4e-50 Score=368.04 Aligned_cols=242 Identities=19% Similarity=0.261 Sum_probs=191.4
Q ss_pred CCCcccceeeeec-------ceecccccCCC--chhhhHHHHHHHHHhcC-CCcCcceeEEEEEeC-CeeeEEEecCCCC
Q 014478 2 GGRCSKFSICWFH-------CHLKSSVLESS--DLGETLNLEEAKAVGNL-RSERLANLIGCCYEA-DERLLVAEFMPNE 70 (424)
Q Consensus 2 G~~g~v~~~~~~~-------~~v~~~~~~~~--~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~-~~~~lv~e~~~~g 70 (424)
||||.||++.+.+ ..|++|++... ....+.+.+|...+.++ +|+||+.+++++... ...++|||||++|
T Consensus 24 G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~~~~iv~E~~~~g 103 (299)
T d1ywna1 24 GAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFG 103 (299)
T ss_dssp CSSCEEEEEEEESTTSSSCEEEEEEEEC----CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTSCCEEEEECCTTC
T ss_pred cCCeEEEEEEEcCCCcccCCeEEEEEEEccccCcHHHHHHHHHHHHHHhhcCCCeEEEeeeeeccCCCeEEEEEEecCCC
Confidence 9999999998843 35788877543 33456788898888888 689999999998765 4588999999999
Q ss_pred CHHhHhccCC--------------CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccc
Q 014478 71 TLAKHLFHWE--------------TQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMK 136 (424)
Q Consensus 71 sL~~~l~~~~--------------~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~ 136 (424)
+|.+++.... ...+++.+++.++.||+.||.|||+++ ||||||||+|||++.++.+||+|||+++
T Consensus 104 ~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~~~-ivHrDlKp~NILl~~~~~~Kl~DFGla~ 182 (299)
T d1ywna1 104 NLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK-CIHRDLAARNILLSEKNVVKICDFGLAR 182 (299)
T ss_dssp BHHHHHHHTGGGBCC-----------CBCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEECGGGCEEECC-----
T ss_pred cHHHHHHhccccccccccchhhhhcccCCHHHHHHHHHHHHHHHHHHHhCC-CcCCcCCccceeECCCCcEEEccCcchh
Confidence 9999986421 235899999999999999999999999 9999999999999999999999999998
Q ss_pred cCCCC------CccccCccCCCccccccCCCCCCcceehhHHHHHHHhhCCC-CCCchhhHHHhhhhhhHhhhcccCCCC
Q 014478 137 NSRDG------KSYSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKH-IPPSHALDLIRSKNFLLLMDSALEGHF 209 (424)
Q Consensus 137 ~~~~~------~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 209 (424)
..... ....||+.|||||++.++.++.++|||||||++|||+||.. ||.... ....+...+........
T Consensus 183 ~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~sDiwS~Gvil~ellt~~~~p~~~~~----~~~~~~~~~~~~~~~~~ 258 (299)
T d1ywna1 183 DIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVK----IDEEFCRRLKEGTRMRA 258 (299)
T ss_dssp -CCSCTTSCCTTSCCCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCC----CSHHHHHHHHHTCCCCC
T ss_pred hccccccccccCceeeCccccchhHhhcCCCCcccceeehHHHHHHHHhCCCCCCCCCC----HHHHHHHHHhcCCCCCC
Confidence 65432 23468999999999999999999999999999999999764 444321 11222333344445566
Q ss_pred CchhHHHHHHHHHHhcccCcCCCCCHHHHHHHHHHHhhh
Q 014478 210 SNDEGTELVRLASRCLQSEARERPNAKSLVISLMSLQKE 248 (424)
Q Consensus 210 ~~~~~~~l~~li~~cl~~dp~~Rps~~~~~~~l~~~~~~ 248 (424)
+..+++++.++|.+||+.||++|||+++++++|+.+.+.
T Consensus 259 ~~~~~~~l~~li~~cl~~dP~~Rpt~~eil~~L~~ilq~ 297 (299)
T d1ywna1 259 PDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQA 297 (299)
T ss_dssp CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred CccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhC
Confidence 777889999999999999999999999999999988653
|
| >d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Mycobacterial protein kinase PknB, catalytic domain species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=100.00 E-value=1.3e-49 Score=362.89 Aligned_cols=238 Identities=17% Similarity=0.209 Sum_probs=193.3
Q ss_pred CCCcccceeee--ecceecccccCCCc----hhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCe----eeEEEecCCCCC
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESSD----LGETLNLEEAKAVGNLRSERLANLIGCCYEADE----RLLVAEFMPNET 71 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~~----~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~----~~lv~e~~~~gs 71 (424)
||||.||++.+ .+..|++|++.... .....|.+|+++|+.++||||+++++++...+. .||||||++||+
T Consensus 18 G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~~l~~~~hpniv~~~~~~~~~~~~~~~~~lvmE~~~g~~ 97 (277)
T d1o6ya_ 18 GGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVT 97 (277)
T ss_dssp CSSEEEEEEEETTTTEEEEEEEECSTTTTCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEECSSSEEEEEEEECCCEEE
T ss_pred CCCeEEEEEEECCCCCEEEEEEEchhhccCHHHHHHHHHHHHHHHhcCCCCCCcccceeeeccCCCceEEEEEECCCCCE
Confidence 89999999987 57889999885432 335678999999999999999999999987543 789999999999
Q ss_pred HHhHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCC-------Ccc
Q 014478 72 LAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG-------KSY 144 (424)
Q Consensus 72 L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~-------~~~ 144 (424)
|.+++.. .+++++.+++.++.||+.||.|||+++ |+||||||+|||++.++..+++|||.++..... ...
T Consensus 98 L~~~~~~--~~~l~~~~~~~i~~qi~~al~~lH~~~-iiHrDiKP~NIll~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~ 174 (277)
T d1o6ya_ 98 LRDIVHT--EGPMTPKRAIEVIADACQALNFSHQNG-IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAV 174 (277)
T ss_dssp HHHHHHH--HCSCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEEETTSCEEECCCTTCEECC------------
T ss_pred ehhhhcc--cCCCCHHHHHHHHHHHHHHHHHHHhCC-ccCccccCcccccCccccceeehhhhhhhhccccccccccccc
Confidence 9998865 467999999999999999999999999 999999999999999999999999988754322 234
Q ss_pred ccCccCCCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhc--ccCCCCCchhHHHHHHHHH
Q 014478 145 STNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDS--ALEGHFSNDEGTELVRLAS 222 (424)
Q Consensus 145 ~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~li~ 222 (424)
.||+.|||||++.+..++.++|||||||++|||+||+.||........ ....+.. .........+|+++.++|.
T Consensus 175 ~Gt~~Y~aPE~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~----~~~~~~~~~~~~~~~~~~~s~~l~~li~ 250 (277)
T d1o6ya_ 175 IGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSV----AYQHVREDPIPPSARHEGLSADLDAVVL 250 (277)
T ss_dssp ----TTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHH----HHHHHHCCCCCGGGTSSSCCHHHHHHHH
T ss_pred cCcccccCHHHHcCCCCCcceecccchHHHHHHHhCCCCCCCcCHHHH----HHHHHhcCCCCCchhccCCCHHHHHHHH
Confidence 689999999999988999999999999999999999999876422211 1111111 1122234567889999999
Q ss_pred HhcccCcCCCC-CHHHHHHHHHHHh
Q 014478 223 RCLQSEARERP-NAKSLVISLMSLQ 246 (424)
Q Consensus 223 ~cl~~dp~~Rp-s~~~~~~~l~~~~ 246 (424)
+||+.||++|| |+++++..|.++.
T Consensus 251 ~~L~~dp~~R~~sa~~l~~~l~r~~ 275 (277)
T d1o6ya_ 251 KALAKNPENRYQTAAEMRADLVRVH 275 (277)
T ss_dssp HHTCSSGGGSCSSHHHHHHHHHHHH
T ss_pred HHccCCHhHCHhHHHHHHHHHHHHh
Confidence 99999999998 8999999888765
|
| >d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fibroblast growth factor receptor 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.3e-49 Score=363.77 Aligned_cols=240 Identities=19% Similarity=0.289 Sum_probs=199.3
Q ss_pred CCCcccceeeeec---------ceecccccCCCc--hhhhHHHHHHHHHhcC-CCcCcceeEEEEEeCCeeeEEEecCCC
Q 014478 2 GGRCSKFSICWFH---------CHLKSSVLESSD--LGETLNLEEAKAVGNL-RSERLANLIGCCYEADERLLVAEFMPN 69 (424)
Q Consensus 2 G~~g~v~~~~~~~---------~~v~~~~~~~~~--~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~~~~ 69 (424)
||||.||.+.+.+ ..|++|++.... .....+.+|+..+.++ +|||||+++++|.+++..++||||+++
T Consensus 24 G~fg~Vy~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~e~~~l~~~~~HpnIv~~~~~~~~~~~~~~v~e~~~~ 103 (299)
T d1fgka_ 24 GAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASK 103 (299)
T ss_dssp ----CEEEEEEECC----CCCEEEEEEECCCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEECCCTT
T ss_pred cCCcEEEEEEEcCCCcccccCceEEEEEEECcccChHHHHHHHHHHHHHHHhcCCCeEEecccccccCCeEEEEEEccCC
Confidence 8999999998643 357888875443 3457888999999999 899999999999999999999999999
Q ss_pred CCHHhHhccCC--------------CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEcccccc
Q 014478 70 ETLAKHLFHWE--------------TQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLM 135 (424)
Q Consensus 70 gsL~~~l~~~~--------------~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~ 135 (424)
|+|.+++.... ...+++.+++.++.||+.||.|||+++ ||||||||+|||++.++.+||+|||++
T Consensus 104 g~l~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~ylH~~~-ivHrDiKp~NiLl~~~~~~kl~dfg~~ 182 (299)
T d1fgka_ 104 GNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKK-CIHRDLAARNVLVTEDNVMKIADFGLA 182 (299)
T ss_dssp CBHHHHHHTTSCC------------CCCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEECTTCCEEECSTTCC
T ss_pred CcHHHHHHhhcCCccccccccccCccccCCHHHHHHHHHHHHHHHHHhhhCC-EEeeeecccceeecCCCCeEeccchhh
Confidence 99999996432 245899999999999999999999999 999999999999999999999999998
Q ss_pred ccCCCC------CccccCccCCCccccccCCCCCCcceehhHHHHHHHhh-CCCCCCchhhHHHhhhhhhHhhhcccCCC
Q 014478 136 KNSRDG------KSYSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKNFLLLMDSALEGH 208 (424)
Q Consensus 136 ~~~~~~------~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (424)
+..... ....+|+.|+|||.+.++.++.++|||||||++|||++ |..||..... ......+.......
T Consensus 183 ~~~~~~~~~~~~~~~~~~~~y~aPE~l~~~~y~~k~DiwS~Gvvl~ell~~g~~p~~~~~~-----~~~~~~i~~~~~~~ 257 (299)
T d1fgka_ 183 RDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPV-----EELFKLLKEGHRMD 257 (299)
T ss_dssp CCGGGCCTTCCCTTSCCGGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCH-----HHHHHHHHTTCCCC
T ss_pred ccccccccccccccCCCChhhhhhhHhcCCCCCchhhhHHhHHHHHHhccCCCCCCCCCCH-----HHHHHHHHcCCCCC
Confidence 865432 33567899999999999999999999999999999998 5666654322 12233444455566
Q ss_pred CCchhHHHHHHHHHHhcccCcCCCCCHHHHHHHHHHHhh
Q 014478 209 FSNDEGTELVRLASRCLQSEARERPNAKSLVISLMSLQK 247 (424)
Q Consensus 209 ~~~~~~~~l~~li~~cl~~dp~~Rps~~~~~~~l~~~~~ 247 (424)
.|..+++++.+||.+||+.||++|||+.+|++.|+++..
T Consensus 258 ~p~~~~~~l~~li~~cl~~dP~~Rps~~eil~~L~~i~a 296 (299)
T d1fgka_ 258 KPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVA 296 (299)
T ss_dssp CCSSCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred CCccchHHHHHHHHHHccCCHhHCcCHHHHHHHHHHHhh
Confidence 777889999999999999999999999999999998864
|
| >d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Titin, kinase domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=9.8e-50 Score=370.22 Aligned_cols=234 Identities=15% Similarity=0.177 Sum_probs=198.2
Q ss_pred CCCcccceeee--ecceecccccCCCchhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHhHhccC
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESSDLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHW 79 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~ 79 (424)
|+||.||++.+ .+..+++|++.........+.+|+++|++++|||||++++++.+++..|||||||+||+|.+++..
T Consensus 16 G~fg~Vy~~~~~~~~~~~AiK~i~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~lvmE~~~gg~L~~~i~~- 94 (321)
T d1tkia_ 16 GEFGIVHRCVETSSKKTYMAKFVKVKGTDQVLVKKEISILNIARHRNILHLHESFESMEELVMIFEFISGLDIFERINT- 94 (321)
T ss_dssp CSSEEEEEEEETTTTEEEEEEEECCCTHHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEECCCCCCBHHHHHTS-
T ss_pred CCCeEEEEEEECCCCcEEEEEEEcCCcccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEecCCCCcHHHHHHh-
Confidence 89999999998 467789998887777777889999999999999999999999999999999999999999999965
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCC--CCeEEccccccccCCCCC---ccccCccCCCcc
Q 014478 80 ETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKD--GNPRLSSFGLMKNSRDGK---SYSTNLAFTPPE 154 (424)
Q Consensus 80 ~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~--~~~kl~Dfg~~~~~~~~~---~~~gt~~y~aPE 154 (424)
.+.++++.++..++.||+.||.|||+++ |+||||||+|||++.+ +.+||+|||+++...... ...+|+.|+|||
T Consensus 95 ~~~~l~e~~~~~i~~qi~~al~yLH~~~-iiHrDlKp~NIll~~~~~~~ikl~DFG~~~~~~~~~~~~~~~~t~~y~ape 173 (321)
T d1tkia_ 95 SAFELNEREIVSYVHQVCEALQFLHSHN-IGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNFRLLFTAPEYYAPE 173 (321)
T ss_dssp SSCCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEESSSSCCCEEECCCTTCEECCTTCEEEEEESCGGGSCHH
T ss_pred cCCCCCHHHHHHHHHHHHHHHHHHHHcC-CCcccccccceeecCCCceEEEEcccchhhccccCCcccccccccccccch
Confidence 3457999999999999999999999999 9999999999999754 479999999998765443 346899999999
Q ss_pred ccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhcccC--CCCCchhHHHHHHHHHHhcccCcCCC
Q 014478 155 YMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALE--GHFSNDEGTELVRLASRCLQSEARER 232 (424)
Q Consensus 155 ~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~li~~cl~~dp~~R 232 (424)
.+.+..++.++|||||||++|+|++|..||........ ...+...... ......+++++.+||.+||..||.+|
T Consensus 174 ~~~~~~~~~~~DiWSlGvily~ll~G~~Pf~~~~~~~~----~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R 249 (321)
T d1tkia_ 174 VHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQI----IENIMNAEYTFDEEAFKEISIEAMDFVDRLLVKERKSR 249 (321)
T ss_dssp HHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSHHHH----HHHHHHTCCCCCHHHHTTSCHHHHHHHHTTSCSSGGGS
T ss_pred hccCCCCCchhhcccHHHHHHHHHhCCCCCCCCCHHHH----HHHHHhCCCCCChhhccCCCHHHHHHHHHHccCChhHC
Confidence 99988999999999999999999999999877532211 1112111111 11112467889999999999999999
Q ss_pred CCHHHHHHH
Q 014478 233 PNAKSLVIS 241 (424)
Q Consensus 233 ps~~~~~~~ 241 (424)
||++|+++|
T Consensus 250 ~s~~eil~h 258 (321)
T d1tkia_ 250 MTASEALQH 258 (321)
T ss_dssp CCHHHHHHS
T ss_pred cCHHHHhcC
Confidence 999999986
|
| >d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase activated protein kinase 2, mapkap2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.2e-49 Score=369.75 Aligned_cols=235 Identities=14% Similarity=0.139 Sum_probs=189.1
Q ss_pred CCCcccceeee--ecceecccccCCCchhhhHHHHHHHHHhcC-CCcCcceeEEEEEe----CCeeeEEEecCCCCCHHh
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESSDLGETLNLEEAKAVGNL-RSERLANLIGCCYE----ADERLLVAEFMPNETLAK 74 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~----~~~~~lv~e~~~~gsL~~ 74 (424)
|+||.||++.+ .+..||+|++... ..+.+|+.++.++ +|||||+++++|.+ +...|||||||+||+|.+
T Consensus 23 G~fg~Vy~a~~~~~~~~vAiK~i~~~----~~~~~E~~~~~~~~~hpnIv~l~~~~~~~~~~~~~~~ivmEy~~gg~L~~ 98 (335)
T d2ozaa1 23 GINGKVLQIFNKRTQEKFALKMLQDC----PKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFS 98 (335)
T ss_dssp CSSCEEEEEEETTTCCEEEEEEEECS----HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEEECCCSEEHHH
T ss_pred ccCeEEEEEEECCCCCEEEEEEECCc----HHHHHHHHHHHHhcCCCCCCeEEEEEeecccCCCEEEEEEECCCCCcHHH
Confidence 99999999987 5678898887543 4577899987655 89999999999875 356899999999999999
Q ss_pred HhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecC---CCCeEEccccccccCCCC---CccccCc
Q 014478 75 HLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDK---DGNPRLSSFGLMKNSRDG---KSYSTNL 148 (424)
Q Consensus 75 ~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~---~~~~kl~Dfg~~~~~~~~---~~~~gt~ 148 (424)
++......++++.++..|+.||+.||.|||+++ |+||||||+|||++. ++.+||+|||+++..... ....||+
T Consensus 99 ~i~~~~~~~l~e~~~~~i~~qi~~al~ylH~~~-iiHRDiKp~NIll~~~~~~~~~Kl~DFG~a~~~~~~~~~~~~~gt~ 177 (335)
T d2ozaa1 99 RIQDRGDQAFTEREASEIMKSIGEAIQYLHSIN-IAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTP 177 (335)
T ss_dssp HHHSCSCCCEEHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEESCSSTTCCEEECCCTTCEECCCCCCCCCCSCCC
T ss_pred HHHhcCCCCcCHHHHHHHHHHHHHHHHHHHHcC-CccccccccccccccccccccccccccceeeeccCCCccccccCCc
Confidence 997644567999999999999999999999999 999999999999975 467999999999865543 3457999
Q ss_pred cCCCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhcccC--CCCCchhHHHHHHHHHHhcc
Q 014478 149 AFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALE--GHFSNDEGTELVRLASRCLQ 226 (424)
Q Consensus 149 ~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~li~~cl~ 226 (424)
.|||||++.+..++.++|||||||++|+|+||+.||...................... ......+++++.+||.+||+
T Consensus 178 ~y~aPE~~~~~~y~~~~DiwSlGvily~lltg~~Pf~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~ 257 (335)
T d2ozaa1 178 YYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLK 257 (335)
T ss_dssp SSCCCCCCCGGGGSHHHHHHHHHHHHHHHTTSSCSCEETTCC--------CCCSCSSSCCTTHHHHSCHHHHHHHHHHSC
T ss_pred ccCCcHHHcCCCCCHHHHHHhhchhHHHHhhCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCcccccCCHHHHHHHHHHcc
Confidence 9999999998899999999999999999999999887642111111111111111111 11113567899999999999
Q ss_pred cCcCCCCCHHHHHHH
Q 014478 227 SEARERPNAKSLVIS 241 (424)
Q Consensus 227 ~dp~~Rps~~~~~~~ 241 (424)
.||++|||+.++++|
T Consensus 258 ~dP~~R~s~~eil~h 272 (335)
T d2ozaa1 258 TEPTQRMTITEFMNH 272 (335)
T ss_dssp SSTTTSCCHHHHHHS
T ss_pred CChhHCcCHHHHHcC
Confidence 999999999999876
|
| >d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: gamma-subunit of glycogen phosphorylase kinase (Phk) species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=100.00 E-value=4.3e-49 Score=357.99 Aligned_cols=233 Identities=16% Similarity=0.160 Sum_probs=195.4
Q ss_pred CCCcccceeee--ecceecccccCCCch----------hhhHHHHHHHHHhcCC-CcCcceeEEEEEeCCeeeEEEecCC
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESSDL----------GETLNLEEAKAVGNLR-SERLANLIGCCYEADERLLVAEFMP 68 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~~~----------~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~~lv~e~~~ 68 (424)
|+||.||++.. .+..+|+|++..... ..+.+.+|+.+|++++ ||||+++++++.+++..|||||||+
T Consensus 14 G~~g~V~~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~~~~~ivmE~~~ 93 (277)
T d1phka_ 14 GVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMK 93 (277)
T ss_dssp CSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEEEECCT
T ss_pred CcCeEEEEEEECCCCCEEEEEEEecccccchhHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEeecccCcceEEEEEcCC
Confidence 89999999987 567788888754321 2346889999999996 9999999999999999999999999
Q ss_pred CCCHHhHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCC---Cccc
Q 014478 69 NETLAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG---KSYS 145 (424)
Q Consensus 69 ~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~---~~~~ 145 (424)
||+|.+++.. .+++++.++..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++..... ....
T Consensus 94 ~g~L~~~l~~--~~~l~e~~~~~~~~qi~~al~~lH~~~-ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~~~~~~~~~~ 170 (277)
T d1phka_ 94 KGELFDYLTE--KVTLSEKETRKIMRALLEVICALHKLN-IVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLREVC 170 (277)
T ss_dssp TCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEECTTCCEEECCCTTCEECCTTCCBCCCC
T ss_pred CchHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHcC-CcccccccceEEEcCCCCeEEccchheeEccCCCceeeee
Confidence 9999999975 567999999999999999999999999 999999999999999999999999999876543 3457
Q ss_pred cCccCCCcccccc------CCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhc--ccCCCCCchhHHHH
Q 014478 146 TNLAFTPPEYMRT------GRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDS--ALEGHFSNDEGTEL 217 (424)
Q Consensus 146 gt~~y~aPE~~~~------~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l 217 (424)
||+.|+|||.+.+ ..++.++||||+||++|||++|+.||......... ..+... .........+|+++
T Consensus 171 gt~~y~~PE~~~~~~~~~~~~~~~~~DiwslGvilyeml~g~~Pf~~~~~~~~~----~~i~~~~~~~~~~~~~~~s~~~ 246 (277)
T d1phka_ 171 GTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLML----RMIMSGNYQFGSPEWDDYSDTV 246 (277)
T ss_dssp SCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHH----HHHHHTCCCCCTTTGGGSCHHH
T ss_pred ccCCCCCHHHhhccccccCCCCCchheEcccchhhhhhccCCCCCCCCCHHHHH----HHHHhCCCCCCCcccccCCHHH
Confidence 8999999999863 24688999999999999999999998875322211 112221 22233345788999
Q ss_pred HHHHHHhcccCcCCCCCHHHHHHH
Q 014478 218 VRLASRCLQSEARERPNAKSLVIS 241 (424)
Q Consensus 218 ~~li~~cl~~dp~~Rps~~~~~~~ 241 (424)
.+|+.+||+.||++|||++++++|
T Consensus 247 ~~li~~~L~~~p~~R~s~~eil~h 270 (277)
T d1phka_ 247 KDLVSRFLVVQPQKRYTAEEALAH 270 (277)
T ss_dssp HHHHHHHCCSSGGGSCCHHHHTTS
T ss_pred HHHHHHHccCChhHCcCHHHHHcC
Confidence 999999999999999999999765
|
| >d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: cAMP-dependent PK, catalytic subunit species: Mouse (Mus musculus) [TaxId: 10090]
Probab=100.00 E-value=5.5e-49 Score=369.06 Aligned_cols=231 Identities=15% Similarity=0.183 Sum_probs=198.3
Q ss_pred CCCcccceeee--ecceecccccCCCc----hhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHhH
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESSD----LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKH 75 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~~----~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~ 75 (424)
|+||.||++.+ .+..+|+|++.... ...+.+.+|+++|+.++||||+++++++.+....++||||+.||+|..+
T Consensus 52 G~fg~Vy~a~~~~~g~~~AvK~i~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~v~e~~~~g~l~~~ 131 (350)
T d1rdqe_ 52 GSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSH 131 (350)
T ss_dssp CSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCTTCBHHHH
T ss_pred CcCcEEEEEEECCCCCEEEEEEEchHHccCHHHHHHHHHHHHHHHHcCCCcEeecccccccccccccccccccccchhhh
Confidence 99999999987 57788888875332 2356789999999999999999999999999999999999999999999
Q ss_pred hccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCC-CccccCccCCCcc
Q 014478 76 LFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG-KSYSTNLAFTPPE 154 (424)
Q Consensus 76 l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~-~~~~gt~~y~aPE 154 (424)
+.. ...+++.++..++.||+.||.|||+++ ||||||||+|||++.+|.+||+|||+++..... ....||+.|||||
T Consensus 132 l~~--~~~l~e~~~~~i~~qi~~aL~yLH~~~-iiHRDIKP~NILl~~~g~ikL~DFG~a~~~~~~~~~~~Gt~~Y~APE 208 (350)
T d1rdqe_ 132 LRR--IGRFSEPHARFYAAQIVLTFEYLHSLD-LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWTLCGTPEALAPE 208 (350)
T ss_dssp HHH--HCCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEECTTSCEEECCCTTCEECSSCBCCCEECGGGCCHH
T ss_pred Hhh--cCCCCHHHHHHHHHHHHHHHHHHHhCC-EecCcCCHHHcccCCCCCEEeeeceeeeecccccccccCccccCCHH
Confidence 965 457999999999999999999999999 999999999999999999999999999876643 4567999999999
Q ss_pred ccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHHHHHHHHHhcccCcCCCC-
Q 014478 155 YMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERP- 233 (424)
Q Consensus 155 ~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rp- 233 (424)
++.+..++.++|||||||++|||++|+.||........ ...+... ....+..+++++.++|.+||..||.+|+
T Consensus 209 ~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~~----~~~i~~~--~~~~p~~~s~~~~~li~~~L~~dP~kR~~ 282 (350)
T d1rdqe_ 209 IILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI----YEKIVSG--KVRFPSHFSSDLKDLLRNLLQVDLTKRFG 282 (350)
T ss_dssp HHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH----HHHHHHC--CCCCCTTCCHHHHHHHHHHSCSCTTTCTT
T ss_pred HHcCCCCCccccccchhHHHHHHHhCCCCCCCcCHHHH----HHHHhcC--CCCCCccCCHHHHHHHHHHhhhCHHhccc
Confidence 99999999999999999999999999999876522211 1112221 2234567888999999999999999994
Q ss_pred ----CHHHHHHH
Q 014478 234 ----NAKSLVIS 241 (424)
Q Consensus 234 ----s~~~~~~~ 241 (424)
|++++++|
T Consensus 283 ~~r~t~~ell~H 294 (350)
T d1rdqe_ 283 NLKNGVNDIKNH 294 (350)
T ss_dssp SSTTTTHHHHTS
T ss_pred cccccHHHHHcC
Confidence 89999875
|
| >d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: G-protein coupled receptor kinase 2 species: Cow (Bos taurus) [TaxId: 9913]
Probab=100.00 E-value=1.1e-48 Score=368.94 Aligned_cols=234 Identities=21% Similarity=0.217 Sum_probs=192.3
Q ss_pred CCCcccceeee--ecceecccccCCCc----hhhhHHHH---HHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCH
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESSD----LGETLNLE---EAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETL 72 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~~----~~~~~~~~---E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL 72 (424)
||||.||.+.+ .+..||+|++.... .....+.+ |+++++.++|||||++++++.+.+..|||||||+||+|
T Consensus 15 G~fg~Vy~~~~~~t~~~vAiK~i~~~~~~~~~~~~~~~~e~~~~~~l~~~~hpnIv~l~~~~~~~~~~~ivmE~~~gg~L 94 (364)
T d1omwa3 15 GGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDL 94 (364)
T ss_dssp CSSCEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEEEEEECCCCSCBH
T ss_pred CCCeEEEEEEECCCCCEEEEEEEchHHcchhhHHHHHHHHHHHHHHHhcCCCCcEEEEEEEEEECCEEEEEEEecCCCcH
Confidence 99999999988 57788988875332 12233444 47778888999999999999999999999999999999
Q ss_pred HhHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCC--CccccCccC
Q 014478 73 AKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG--KSYSTNLAF 150 (424)
Q Consensus 73 ~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~--~~~~gt~~y 150 (424)
.+++.. ...+++..+..++.||+.||.|||+++ ||||||||+|||++.+|.+||+|||+++..... ....||+.|
T Consensus 95 ~~~l~~--~~~~~e~~~~~~~~qi~~aL~ylH~~~-iiHrDlKP~NILl~~~g~iKl~DFGla~~~~~~~~~~~~GT~~y 171 (364)
T d1omwa3 95 HYHLSQ--HGVFSEADMRFYAAEIILGLEHMHNRF-VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVGTHGY 171 (364)
T ss_dssp HHHHHH--HCSCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEECSSSCEEECCCTTCEECSSSCCCSCCSCGGG
T ss_pred HHHHHh--cccccHHHHHHHHHHHHHHHHHHHHCC-ccceeeccceeEEcCCCcEEEeeeceeeecCCCccccccccccc
Confidence 999975 467899999999999999999999999 999999999999999999999999999876543 345799999
Q ss_pred CCccccccC-CCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHHHHHHHHHhcccCc
Q 014478 151 TPPEYMRTG-RVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEA 229 (424)
Q Consensus 151 ~aPE~~~~~-~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp 229 (424)
||||++..+ .++.++|||||||++|||+||+.||......... ... ..........+..+++++.+||.+||+.||
T Consensus 172 ~APE~~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~--~~~-~~~~~~~~~~~~~~s~~~~~li~~~L~~dP 248 (364)
T d1omwa3 172 MAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKH--EID-RMTLTMAVELPDSFSPELRSLLEGLLQRDV 248 (364)
T ss_dssp CCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCSSCSSCSSCHH--HHH-HHSSSCCCCCCSSSCHHHHHHHHHHTCSST
T ss_pred chhHHhhcCCCCCcccchhHHHHHHHHHHhCCCCCCCCCHHHHH--HHH-HhcccCCCCCCCCCCHHHHHHHHHHcccCH
Confidence 999999754 5899999999999999999999998764211110 011 111122334566788999999999999999
Q ss_pred CCCCC-----HHHHHHH
Q 014478 230 RERPN-----AKSLVIS 241 (424)
Q Consensus 230 ~~Rps-----~~~~~~~ 241 (424)
.+||| ++++++|
T Consensus 249 ~~R~t~~~~~a~eil~H 265 (364)
T d1omwa3 249 NRRLGCLGRGAQEVKES 265 (364)
T ss_dssp TTSTTTSSSTHHHHHTS
T ss_pred HHhCCCcccCHHHHHcC
Confidence 99999 6888865
|
| >d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Insulin-like growth factor 1 receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.2e-48 Score=361.31 Aligned_cols=240 Identities=16% Similarity=0.209 Sum_probs=199.8
Q ss_pred CCCcccceeeee-------cceecccccCCCc--hhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCH
Q 014478 2 GGRCSKFSICWF-------HCHLKSSVLESSD--LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETL 72 (424)
Q Consensus 2 G~~g~v~~~~~~-------~~~v~~~~~~~~~--~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL 72 (424)
||||.||++.+. +..||+|++.... .....|.+|++++++++||||++++|+|......++||||+++|+|
T Consensus 31 G~fG~Vy~a~~~~~~~~~~~~~VAvK~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lv~e~~~~g~l 110 (308)
T d1p4oa_ 31 GSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDL 110 (308)
T ss_dssp CSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEEECSSSSCEEEEECCTTCBH
T ss_pred CCCeEEEEEEECCcccCCCCcEEEEEEECcccChHHHHHHHHHHHHHHHcCCCCEeeeeeEEecCCceeEEEeecCCCCH
Confidence 999999999885 3568888886433 3455789999999999999999999999999999999999999999
Q ss_pred HhHhccC--------CCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCC---
Q 014478 73 AKHLFHW--------ETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG--- 141 (424)
Q Consensus 73 ~~~l~~~--------~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~--- 141 (424)
.+++... ....+++..+++++.|++.||.|||+++ |+||||||+|||++.++++||+|||+++.....
T Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~gl~~LH~~~-ivHrDlk~~NiLld~~~~~Kl~DFGla~~~~~~~~~ 189 (308)
T d1p4oa_ 111 KSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANK-FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYY 189 (308)
T ss_dssp HHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHTT-CBCSCCSGGGEEECTTCCEEECCTTCCCGGGGGGCE
T ss_pred HHHHHhcccccccccccCCCCHHHHHHHHHHHHHHHHHHhhCC-eeeceEcCCceeecCCceEEEeecccceeccCCcce
Confidence 9988532 1235789999999999999999999999 999999999999999999999999999865432
Q ss_pred ---CccccCccCCCccccccCCCCCCcceehhHHHHHHHhhCCC-CCCchhhHHHhhhhhhHhhhcccCCCCCchhHHHH
Q 014478 142 ---KSYSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKH-IPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTEL 217 (424)
Q Consensus 142 ---~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 217 (424)
....||+.|+|||.+.++.++.++|||||||++|||+||.. |+... ........+........+..+++.+
T Consensus 190 ~~~~~~~~t~~y~aPe~l~~~~~~~~~Dv~S~G~il~El~t~~~~p~~~~-----~~~~~~~~i~~~~~~~~p~~~~~~l 264 (308)
T d1p4oa_ 190 RKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGL-----SNEQVLRFVMEGGLLDKPDNCPDML 264 (308)
T ss_dssp EGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTS-----CHHHHHHHHHTTCCCCCCTTCCHHH
T ss_pred eeccceecccccCCHHHHccCCCCcccccccHHHHHHHHHhCCCCCCCCC-----CHHHHHHHHHhCCCCCCcccchHHH
Confidence 23357899999999999999999999999999999999964 44432 2222222233334455667788999
Q ss_pred HHHHHHhcccCcCCCCCHHHHHHHHHHHhh
Q 014478 218 VRLASRCLQSEARERPNAKSLVISLMSLQK 247 (424)
Q Consensus 218 ~~li~~cl~~dp~~Rps~~~~~~~l~~~~~ 247 (424)
.++|.+||+.||++|||+++|+++|++..+
T Consensus 265 ~~li~~cl~~~P~~RPs~~~il~~L~~~~~ 294 (308)
T d1p4oa_ 265 FELMRMCWQYNPKMRPSFLEIISSIKEEME 294 (308)
T ss_dssp HHHHHHHTCSSGGGSCCHHHHHHHHGGGSC
T ss_pred HHHHHHHcCCChhHCcCHHHHHHHHHHhcC
Confidence 999999999999999999999999876643
|
| >d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-KIT receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.6e-48 Score=361.14 Aligned_cols=243 Identities=19% Similarity=0.279 Sum_probs=202.9
Q ss_pred CCCcccceeeeec-------ceecccccCCCc--hhhhHHHHHHHHHhcC-CCcCcceeEEEEEeCCeeeEEEecCCCCC
Q 014478 2 GGRCSKFSICWFH-------CHLKSSVLESSD--LGETLNLEEAKAVGNL-RSERLANLIGCCYEADERLLVAEFMPNET 71 (424)
Q Consensus 2 G~~g~v~~~~~~~-------~~v~~~~~~~~~--~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~~~~gs 71 (424)
||||.||++.+.+ ..||+|++.... .....|.+|+.+++.+ +|||||+++|+|.+++..+||||||++|+
T Consensus 34 G~fg~Vy~a~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~E~~~~~~l~~HpnIv~~~g~~~~~~~~~lvmE~~~~g~ 113 (311)
T d1t46a_ 34 GAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGD 113 (311)
T ss_dssp CSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCTTEE
T ss_pred cCCeEEEEEEEeccccCCCCeEEEEEEECcccCHHHHHHHHHHHHHHHhccCCCCEEEEEEEEeeCCEEEEEEEcCCCCC
Confidence 9999999998743 357888775433 4466789999999999 69999999999999999999999999999
Q ss_pred HHhHhccCC----------------CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEcccccc
Q 014478 72 LAKHLFHWE----------------TQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLM 135 (424)
Q Consensus 72 L~~~l~~~~----------------~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~ 135 (424)
|.+++.... ...+++.++..++.||+.||.|||+++ +|||||||+||+++.++.+|++|||++
T Consensus 114 l~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~~LH~~~-ivHrDLKp~NIl~~~~~~~ki~DfG~~ 192 (311)
T d1t46a_ 114 LLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKN-CIHRDLAARNILLTHGRITKICDFGLA 192 (311)
T ss_dssp HHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEEETTTEEEECCCGGG
T ss_pred HHHHHHhccccccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhCC-eeecccccccccccccCcccccccchh
Confidence 999986431 236899999999999999999999999 999999999999999999999999999
Q ss_pred ccCCCC------CccccCccCCCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhcccCCCC
Q 014478 136 KNSRDG------KSYSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHF 209 (424)
Q Consensus 136 ~~~~~~------~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 209 (424)
+..... ....||+.|+|||++.++.++.++|||||||++|||+|+..|+.... .....+...+....+...
T Consensus 193 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwS~G~~l~ellt~g~p~~~~~---~~~~~~~~~i~~~~~~~~ 269 (311)
T d1t46a_ 193 RDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGM---PVDSKFYKMIKEGFRMLS 269 (311)
T ss_dssp SCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTC---CSSHHHHHHHHHTCCCCC
T ss_pred eeccCCCcceEeeecccChHHcCHHHhcCCCCCCcccccchHHHHHHHHhCCCCCCCCC---CHHHHHHHHHhcCCCCCC
Confidence 876543 23467899999999999999999999999999999999554443221 111223344445555666
Q ss_pred CchhHHHHHHHHHHhcccCcCCCCCHHHHHHHHHHHhhh
Q 014478 210 SNDEGTELVRLASRCLQSEARERPNAKSLVISLMSLQKE 248 (424)
Q Consensus 210 ~~~~~~~l~~li~~cl~~dp~~Rps~~~~~~~l~~~~~~ 248 (424)
+..+++++.+||.+||+.||.+|||+++|++.|++...+
T Consensus 270 ~~~~~~~l~~Li~~cl~~dP~~RPs~~~il~~L~~~i~~ 308 (311)
T d1t46a_ 270 PEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQISE 308 (311)
T ss_dssp CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred cccccHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhhcc
Confidence 777889999999999999999999999999999987665
|
| >d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Type I TGF-beta receptor R4 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.1e-48 Score=360.46 Aligned_cols=244 Identities=15% Similarity=0.190 Sum_probs=190.9
Q ss_pred CCCcccceeeeecceecccccCCCchhhhHHHHHHHHHhcCCCcCcceeEEEEEeCC----eeeEEEecCCCCCHHhHhc
Q 014478 2 GGRCSKFSICWFHCHLKSSVLESSDLGETLNLEEAKAVGNLRSERLANLIGCCYEAD----ERLLVAEFMPNETLAKHLF 77 (424)
Q Consensus 2 G~~g~v~~~~~~~~~v~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~----~~~lv~e~~~~gsL~~~l~ 77 (424)
||||.||++.+.+..||+|++..+......+..|+..+.+++||||++++++|.+.+ ..++||||+++|+|.+++.
T Consensus 14 G~fg~Vy~~~~~g~~vAvK~~~~~~~~~~~~e~ei~~~~~~~HpnIv~~~~~~~~~~~~~~~~~lv~Ey~~~g~L~~~l~ 93 (303)
T d1vjya_ 14 GRFGEVWRGKWRGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLN 93 (303)
T ss_dssp CSSSEEEEEEETTEEEEEEEECGGGHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEEECCTTCBHHHHHH
T ss_pred CCCeEEEEEEECCEEEEEEEECccchhHHHHHHHHHHHhhCCCCcCcceEEEEEeCCCcceEEEEEEecccCCCHHHHHh
Confidence 999999999999999999988665543333445666667889999999999998754 5789999999999999996
Q ss_pred cCCCCCCCHHHHHHHHHHHHHHHHHHHh--------CCCcccccCCCCCeeecCCCCeEEccccccccCCCC--------
Q 014478 78 HWETQPMKWAMRLRVALYLAQALEYCSS--------KGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG-------- 141 (424)
Q Consensus 78 ~~~~~~l~~~~~~~i~~qi~~~L~~lH~--------~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~-------- 141 (424)
+ .++++.++++++.|++.||.|+|+ ++ ||||||||+|||++.++.+||+|||+++.....
T Consensus 94 ~---~~l~~~~~~~~~~~ia~gl~~lH~~~~~~~~~~~-IvHrDlKp~NILl~~~~~~Kl~DFGl~~~~~~~~~~~~~~~ 169 (303)
T d1vjya_ 94 R---YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPA-IAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAP 169 (303)
T ss_dssp H---CCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCE-EECSCCCGGGEEECTTSCEEECCCTTCEEEETTTTEECC--
T ss_pred c---CCCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCC-eeccccCccceEEcCCCCeEEEecCccccccCCCcceeccc
Confidence 4 469999999999999999999996 47 999999999999999999999999998865322
Q ss_pred CccccCccCCCccccccC------CCCCCcceehhHHHHHHHhhCCCCCCchhhHHH----------h-hhhhhHhhhcc
Q 014478 142 KSYSTNLAFTPPEYMRTG------RVTPESVVYSFGTMLLDLLSGKHIPPSHALDLI----------R-SKNFLLLMDSA 204 (424)
Q Consensus 142 ~~~~gt~~y~aPE~~~~~------~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~----------~-~~~~~~~~~~~ 204 (424)
....||+.|||||++.+. .++.++|||||||++|||+||..|+........ . ...........
T Consensus 170 ~~~~gt~~y~aPE~~~~~~~~~~~~~~~k~Di~S~Gvvl~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (303)
T d1vjya_ 170 NHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQK 249 (303)
T ss_dssp --CCSCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTSC
T ss_pred cceecccCcCChhhccccccccCCCcCcchhhhhhHHHHHHHhhCCCCCCcccccccchhhcccccchHHHHHHHHhccc
Confidence 235689999999998754 367789999999999999999865532110000 0 00011111222
Q ss_pred cCCCCC-----chhHHHHHHHHHHhcccCcCCCCCHHHHHHHHHHHhhhh
Q 014478 205 LEGHFS-----NDEGTELVRLASRCLQSEARERPNAKSLVISLMSLQKEA 249 (424)
Q Consensus 205 ~~~~~~-----~~~~~~l~~li~~cl~~dp~~Rps~~~~~~~l~~~~~~~ 249 (424)
.+...+ ...+..+.+++.+||+.||++|||+.+|++.|.++.++.
T Consensus 250 ~~p~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ei~~~L~~i~~~~ 299 (303)
T d1vjya_ 250 LRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQE 299 (303)
T ss_dssp CCCCCCGGGGGCHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred cCCCCCcccCChHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHHHHHhc
Confidence 222222 235567999999999999999999999999999887653
|
| >d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase C, theta type species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.2e-48 Score=362.46 Aligned_cols=231 Identities=17% Similarity=0.241 Sum_probs=194.7
Q ss_pred CCCcccceeee--ecceecccccCCCc----hhhhHHHHHHHHHh-cCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHh
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESSD----LGETLNLEEAKAVG-NLRSERLANLIGCCYEADERLLVAEFMPNETLAK 74 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~~----~~~~~~~~E~~~l~-~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~ 74 (424)
|+||.||++.+ .+..||+|++..+. ...+.+..|..++. .++||||+++++++.+++..||||||++||+|.+
T Consensus 13 G~fg~Vy~~~~~~t~~~vAvK~i~k~~~~~~~~~~~~~~e~~~l~~~~~hp~Iv~~~~~~~~~~~~yivmEy~~~g~L~~ 92 (320)
T d1xjda_ 13 GSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMY 92 (320)
T ss_dssp CSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEEEECCTTCBHHH
T ss_pred CCCcEEEEEEECCCCCEEEEEEEchhhccChHHHHHHHHHHHHHHHhCCCCcEEEEEEEEccCCceeEEEeecCCCcHHH
Confidence 89999999988 67788998885432 33456777777765 6899999999999999999999999999999999
Q ss_pred HhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCC----CccccCccC
Q 014478 75 HLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG----KSYSTNLAF 150 (424)
Q Consensus 75 ~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~----~~~~gt~~y 150 (424)
++.. ...+++.++..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++..... ....||+.|
T Consensus 93 ~i~~--~~~~~e~~~~~~~~qi~~al~ylH~~~-iiHrDikp~NiL~~~~~~~kl~DFG~a~~~~~~~~~~~~~~gt~~y 169 (320)
T d1xjda_ 93 HIQS--CHKFDLSRATFYAAEIILGLQFLHSKG-IVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNTFCGTPDY 169 (320)
T ss_dssp HHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTT-CBCCCCCGGGEEECTTSCEEECCCTTCBCCCCTTCCBCCCCSCGGG
T ss_pred Hhhc--cCCCCHHHHHHHHHHHHHHHHHHHhCC-eeeccCcccceeecCCCceeccccchhhhcccccccccccCCCCCc
Confidence 9975 567899999999999999999999999 999999999999999999999999999865432 345789999
Q ss_pred CCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHHHHHHHHHhcccCcC
Q 014478 151 TPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEAR 230 (424)
Q Consensus 151 ~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~ 230 (424)
+|||++.+..++.++|||||||++|||++|+.||.......... .+.. .....|..+++++.+||.+||+.||+
T Consensus 170 ~aPE~~~~~~~~~~~DiwSlGvilyemltG~~PF~~~~~~~~~~----~i~~--~~~~~p~~~s~~~~dli~~~L~~dP~ 243 (320)
T d1xjda_ 170 IAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFH----SIRM--DNPFYPRWLEKEAKDLLVKLFVREPE 243 (320)
T ss_dssp CCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHH----HHHH--CCCCCCTTSCHHHHHHHHHHSCSSGG
T ss_pred CCHHHHcCCCCCchhhhhhhhHHHHHHHhCCCCCCCCCHHHHHH----HHHc--CCCCCCccCCHHHHHHHHHhcccCCC
Confidence 99999999999999999999999999999999987653222211 1111 12345667789999999999999999
Q ss_pred CCCCHH-HHHHH
Q 014478 231 ERPNAK-SLVIS 241 (424)
Q Consensus 231 ~Rps~~-~~~~~ 241 (424)
+|||+. ++++|
T Consensus 244 ~R~s~~~~l~~h 255 (320)
T d1xjda_ 244 KRLGVRGDIRQH 255 (320)
T ss_dssp GSBTTBSCGGGS
T ss_pred CCcCHHHHHHhC
Confidence 999985 67653
|
| >d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell division protein kinase 7, CDK7 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=6.6e-48 Score=355.64 Aligned_cols=237 Identities=17% Similarity=0.140 Sum_probs=188.1
Q ss_pred CCCcccceeee--ecceecccccCCCchh------hhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHH
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESSDLG------ETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLA 73 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~~~~------~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~ 73 (424)
|+||.||++.+ .+..||+|++...... .+.+.+|+.+|++++|||||++++++..++..+|||||+.++++.
T Consensus 9 G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~~~~~~~~~~~~~ivmE~~~~~~~~ 88 (299)
T d1ua2a_ 9 GQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNISLVFDFMETDLEV 88 (299)
T ss_dssp ETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTCCEEEEECCSEEHHH
T ss_pred CcCeEEEEEEECCCCcEEEEEEEehhhhhhhhHHHHHHHHHHHHHHHhCCCCCEeEEEeeeccCCceeehhhhhcchHHh
Confidence 89999999987 5778999988543321 357889999999999999999999999999999999999998777
Q ss_pred hHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCC----CccccCcc
Q 014478 74 KHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG----KSYSTNLA 149 (424)
Q Consensus 74 ~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~----~~~~gt~~ 149 (424)
.+.. ....+++.++..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++..... ....||+.
T Consensus 89 ~~~~--~~~~l~~~~~~~~~~qil~aL~~lH~~~-iiHrDiKp~NIli~~~~~~KL~DFG~a~~~~~~~~~~~~~~gt~~ 165 (299)
T d1ua2a_ 89 IIKD--NSLVLTPSHIKAYMLMTLQGLEYLHQHW-ILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYTHQVVTRW 165 (299)
T ss_dssp HHTT--CCSSCCSSHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEECTTCCEEECCCGGGSTTTSCCCCCCCSCCCCT
T ss_pred hhhh--cccCCCHHHHHHHHHHHHHHHHHhhccc-eecccCCcceEEecCCCccccccCccccccCCCcccccceecChh
Confidence 6664 3567999999999999999999999999 999999999999999999999999999865533 23568999
Q ss_pred CCCccccccC-CCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhc--------------ccCCC------
Q 014478 150 FTPPEYMRTG-RVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDS--------------ALEGH------ 208 (424)
Q Consensus 150 y~aPE~~~~~-~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~------ 208 (424)
|||||++.+. .++.++|||||||++|||++|..||+.......-.........+ .....
T Consensus 166 y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (299)
T d1ua2a_ 166 YRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLPDYVTFKSFPGIPL 245 (299)
T ss_dssp TCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSSSTTSSTTCCCCCCCCCCCH
T ss_pred hccHHHHccCCCCChhhhhhhcchHHHHHHhCcCCCCCCCHHHHHHHHHHhcCCCChhhccchhccchhhhhccCCCCCh
Confidence 9999998755 57999999999999999999998887643221111110000000 00000
Q ss_pred --CCchhHHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 014478 209 --FSNDEGTELVRLASRCLQSEARERPNAKSLVIS 241 (424)
Q Consensus 209 --~~~~~~~~l~~li~~cl~~dp~~Rps~~~~~~~ 241 (424)
.....++++.+||.+||+.||++|||++|+++|
T Consensus 246 ~~~~~~~s~~~~dll~~~L~~dP~~R~sa~e~L~H 280 (299)
T d1ua2a_ 246 HHIFSAAGDDLLDLIQGLFLFNPCARITATQALKM 280 (299)
T ss_dssp HHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTS
T ss_pred HHhcccCCHHHHHHHHHHccCChhhCcCHHHHhCC
Confidence 012356789999999999999999999999864
|
| >d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=9.6e-47 Score=347.39 Aligned_cols=238 Identities=16% Similarity=0.187 Sum_probs=188.1
Q ss_pred CCCcccceeee--ecceecccccCCCc---hhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHhHh
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESSD---LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHL 76 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~~---~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~l 76 (424)
|+||.||++.+ .+..||+|++.... ...+.+.+|+++|++++|||||++++++.+++..|+||||+.+ ++..++
T Consensus 13 G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~Hp~Iv~~~~~~~~~~~~~iv~e~~~~-~~~~~~ 91 (298)
T d1gz8a_ 13 GTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFM 91 (298)
T ss_dssp CSSSEEEEEEETTTCCEEEEEEEC-------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECCSE-EHHHHH
T ss_pred CcCeEEEEEEECCCCCEEEEEEEehhhcChHHHHHHHHHHHHHHhCCCCcEEEeccccccccceeEEEeecCC-chhhhh
Confidence 89999999988 47788989885443 2356889999999999999999999999999999999999976 455555
Q ss_pred ccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCC----CccccCccCCC
Q 014478 77 FHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG----KSYSTNLAFTP 152 (424)
Q Consensus 77 ~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~----~~~~gt~~y~a 152 (424)
.......+++.++..++.||+.||.|||+++ ||||||||+|||++.++.+||+|||+++..... ....||+.|+|
T Consensus 92 ~~~~~~~l~e~~~~~~~~qil~~L~yLH~~~-IiHrDiKpeNIl~~~~~~~kl~DFG~a~~~~~~~~~~~~~~gt~~y~a 170 (298)
T d1gz8a_ 92 DASALTGIPLPLIKSYLFQLLQGLAFCHSHR-VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRA 170 (298)
T ss_dssp HHTTTTCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEECTTSCEEECSTTHHHHHCCCSBCTTCCBCCCTTCC
T ss_pred hhhcccCCCHHHHHHHHHHHHHHHHHhhcCC-EEccccCchheeecccCcceeccCCcceeccCCcccceeecccceeee
Confidence 4435678999999999999999999999999 999999999999999999999999999765432 34478999999
Q ss_pred ccccccCC-CCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhh------------hcccCCC-----------
Q 014478 153 PEYMRTGR-VTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLM------------DSALEGH----------- 208 (424)
Q Consensus 153 PE~~~~~~-~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~----------- 208 (424)
||.+.... ++.++|||||||++|+|++|+.||........-........ .......
T Consensus 171 pE~~~~~~~~~~~~DiwSlGvily~m~~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (298)
T d1gz8a_ 171 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSK 250 (298)
T ss_dssp HHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCCTTSCCCCCCCHHH
T ss_pred hhhhccccCCCccccccccchhhhHHhhCCCCCCCCCHHHHHHHHHHhcCCCchhhccccccccccccccccccccchhh
Confidence 99987665 57899999999999999999999876422111110000000 0000000
Q ss_pred CCchhHHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 014478 209 FSNDEGTELVRLASRCLQSEARERPNAKSLVIS 241 (424)
Q Consensus 209 ~~~~~~~~l~~li~~cl~~dp~~Rps~~~~~~~ 241 (424)
....+++++.+|+.+||..||++|||++|+++|
T Consensus 251 ~~~~~s~~~~dll~~mL~~dP~~R~t~~ell~H 283 (298)
T d1gz8a_ 251 VVPPLDEDGRSLLSQMLHYDPNKRISAKAALAH 283 (298)
T ss_dssp HSTTCCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred hccCCCHHHHHHHHHHccCChhHCcCHHHHhCC
Confidence 011346789999999999999999999999865
|
| >d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Proto-oncogene serine/threonine-protein kinase Pim-1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=6.8e-48 Score=350.27 Aligned_cols=225 Identities=19% Similarity=0.266 Sum_probs=188.6
Q ss_pred CCCcccceeee--ecceecccccCCCc-------hhhhHHHHHHHHHhcCC--CcCcceeEEEEEeCCeeeEEEecCCC-
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESSD-------LGETLNLEEAKAVGNLR--SERLANLIGCCYEADERLLVAEFMPN- 69 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~~-------~~~~~~~~E~~~l~~l~--h~~iv~~~~~~~~~~~~~lv~e~~~~- 69 (424)
|+||.||++.+ .+..|++|++.... .....+.+|+.+|++++ |||||++++++.+.+..++||||+.+
T Consensus 15 G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~~~h~nIv~~~~~~~~~~~~~lv~e~~~~~ 94 (273)
T d1xwsa_ 15 GGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPV 94 (273)
T ss_dssp ETTEEEEEEEETTTCCEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEECSSEEEEEEECCSSE
T ss_pred CCCeEEEEEEECCCCCEEEEEEEehHHccchhhhhHHHHHHHHHHHHHHhccCCCCccEEEEEEeeCCeEEEEEEeccCc
Confidence 89999999998 46778888775332 12345778999999996 89999999999999999999999976
Q ss_pred CCHHhHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCC-CCeEEccccccccCCCC--Ccccc
Q 014478 70 ETLAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKD-GNPRLSSFGLMKNSRDG--KSYST 146 (424)
Q Consensus 70 gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~-~~~kl~Dfg~~~~~~~~--~~~~g 146 (424)
+++.+++.. ...+++.++..++.||+.||.|||+++ |+||||||+|||++.+ +.+||+|||+++..... ....|
T Consensus 95 ~~l~~~~~~--~~~l~e~~~~~~~~qi~~al~~lH~~~-iiHrDiKp~NIll~~~~~~vkl~DFG~a~~~~~~~~~~~~G 171 (273)
T d1xwsa_ 95 QDLFDFITE--RGALQEELARSFFWQVLEAVRHCHNCG-VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDG 171 (273)
T ss_dssp EEHHHHHHH--HCSCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEEETTTTEEEECCCTTCEECCSSCBCCCCS
T ss_pred chHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHHCC-CccccCcccceEEecCCCeEEECccccceeccccccccccc
Confidence 688888864 467999999999999999999999999 9999999999999854 78999999999865543 45679
Q ss_pred CccCCCccccccCCC-CCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHHHHHHHHHhc
Q 014478 147 NLAFTPPEYMRTGRV-TPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCL 225 (424)
Q Consensus 147 t~~y~aPE~~~~~~~-~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl 225 (424)
|+.|||||++.+..+ +.++|||||||++|||++|+.||.... . .... ....+..+|+++.+||.+||
T Consensus 172 T~~y~aPE~~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~--~--------i~~~--~~~~~~~~s~~~~~li~~~L 239 (273)
T d1xwsa_ 172 TRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE--E--------IIRG--QVFFRQRVSSECQHLIRWCL 239 (273)
T ss_dssp CGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHH--H--------HHHC--CCCCSSCCCHHHHHHHHHHT
T ss_pred CCCcCCHHHHcCCCCCCcccccccceeeehhHhhCCCCCCCch--H--------Hhhc--ccCCCCCCCHHHHHHHHHHc
Confidence 999999999987765 567899999999999999998887631 1 1111 12345567889999999999
Q ss_pred ccCcCCCCCHHHHHHH
Q 014478 226 QSEARERPNAKSLVIS 241 (424)
Q Consensus 226 ~~dp~~Rps~~~~~~~ 241 (424)
+.||++|||++|++++
T Consensus 240 ~~dp~~R~s~~eil~h 255 (273)
T d1xwsa_ 240 ALRPSDRPTFEEIQNH 255 (273)
T ss_dssp CSSGGGSCCHHHHHTS
T ss_pred cCCHhHCcCHHHHhcC
Confidence 9999999999999865
|
| >d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK2 species: (Plasmodium falciparum) [TaxId: 5833]
Probab=100.00 E-value=8.1e-46 Score=339.47 Aligned_cols=237 Identities=14% Similarity=0.200 Sum_probs=188.8
Q ss_pred CCCcccceeee-ecceecccccCCCc---hhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHhHhc
Q 014478 2 GGRCSKFSICW-FHCHLKSSVLESSD---LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLF 77 (424)
Q Consensus 2 G~~g~v~~~~~-~~~~v~~~~~~~~~---~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~ 77 (424)
|+||.||++.+ .+..||+|++.... ...+.+.+|+.+|++++||||+++++++...+..+++||++.++.+..+..
T Consensus 13 G~fg~Vy~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~i~~e~~~~~~~~~~~~ 92 (286)
T d1ob3a_ 13 GTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEHLDQDLKKLLDV 92 (286)
T ss_dssp ETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEECCSEEHHHHHHT
T ss_pred CCCcEEEEEEeCCCCEEEEEEEehhhcChHHHHHHHHHHHHHHhCCCCcEEeeeeecccCCceeEEEEeehhhhHHHHHh
Confidence 89999999987 46778999885543 235689999999999999999999999999999999999998877777664
Q ss_pred cCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCC----CccccCccCCCc
Q 014478 78 HWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG----KSYSTNLAFTPP 153 (424)
Q Consensus 78 ~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~----~~~~gt~~y~aP 153 (424)
. .+.+++.++..++.||+.||.|||+++ ||||||||+|||++.++.+||+|||++...... ....+++.|+||
T Consensus 93 ~--~~~l~~~~~~~i~~qi~~~L~~LH~~~-IvHrDiKp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~y~~p 169 (286)
T d1ob3a_ 93 C--EGGLESVTAKSFLLQLLNGIAYCHDRR-VLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEIVTLWYRAP 169 (286)
T ss_dssp S--TTCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEECTTSCEEECCTTHHHHHCC---------CCCTTCCH
T ss_pred h--cCCcchhhhHHHHHHHHHHHHHhccCc-EEecCCCCceeeEcCCCCEEecccccceecccCccccceecccchhhhH
Confidence 3 578999999999999999999999999 999999999999999999999999998765432 344688999999
Q ss_pred cccccC-CCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhh-----------------------hcccCCCC
Q 014478 154 EYMRTG-RVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLM-----------------------DSALEGHF 209 (424)
Q Consensus 154 E~~~~~-~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~-----------------------~~~~~~~~ 209 (424)
|.+.+. .++.++|||||||++|||++|+.||........-........ ........
T Consensus 170 E~~~~~~~~~~~~DiwslGv~l~el~~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (286)
T d1ob3a_ 170 DVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPNFTVYEPLPWESF 249 (286)
T ss_dssp HHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCCTTCCCCCCCCGGGT
T ss_pred HHHhCCCCCCcceeehhcCcHHHHHHHCCCCCCCCCHHHHHHHHHHhhCCCChhhccchhhhhhcccccccccCcchhhh
Confidence 998764 468999999999999999999998875421111110000000 00000112
Q ss_pred CchhHHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 014478 210 SNDEGTELVRLASRCLQSEARERPNAKSLVIS 241 (424)
Q Consensus 210 ~~~~~~~l~~li~~cl~~dp~~Rps~~~~~~~ 241 (424)
...+++++.+||.+||+.||++|||++|+++|
T Consensus 250 ~~~~s~~~~dli~~~L~~dP~~R~s~~ell~H 281 (286)
T d1ob3a_ 250 LKGLDESGIDLLSKMLKLDPNQRITAKQALEH 281 (286)
T ss_dssp CCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred cccCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 23457889999999999999999999999854
|
| >d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK6 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=5.8e-46 Score=343.79 Aligned_cols=238 Identities=16% Similarity=0.141 Sum_probs=186.3
Q ss_pred CCCcccceeeee---cceecccccCCC---chhhhHHHHHHHHHhcC---CCcCcceeEEEEEe-----CCeeeEEEecC
Q 014478 2 GGRCSKFSICWF---HCHLKSSVLESS---DLGETLNLEEAKAVGNL---RSERLANLIGCCYE-----ADERLLVAEFM 67 (424)
Q Consensus 2 G~~g~v~~~~~~---~~~v~~~~~~~~---~~~~~~~~~E~~~l~~l---~h~~iv~~~~~~~~-----~~~~~lv~e~~ 67 (424)
|+||.||++.+. +..||+|++... ......+.+|+.+|+.| +||||++++++|.. ....+++|||+
T Consensus 18 G~fg~V~~a~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~~l~~l~~~~HpnIv~~~~~~~~~~~~~~~~~~~~~e~~ 97 (305)
T d1blxa_ 18 GAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHV 97 (305)
T ss_dssp ETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEECSSEEEEEEEEECC
T ss_pred ccCeEEEEEEEECCCCEEEEEEEEehhhccchHHHHHHHHHHHHHHHhhcCCCCcceeeeeecccccccCceEEEEEEec
Confidence 899999999873 345788877432 22344677888887776 79999999999864 23578999999
Q ss_pred CCCCHHhHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCC---Ccc
Q 014478 68 PNETLAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG---KSY 144 (424)
Q Consensus 68 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~---~~~ 144 (424)
+++++...... ....+++..+..++.|++.||.|||+++ ||||||||+|||++.++.+||+|||+++..... ...
T Consensus 98 ~~~~~~~~~~~-~~~~~~~~~~~~~~~qi~~aL~yLH~~~-ivHrDiKp~NILi~~~~~~kl~dfg~~~~~~~~~~~~~~ 175 (305)
T d1blxa_ 98 DQDLTTYLDKV-PEPGVPTETIKDMMFQLLRGLDFLHSHR-VVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSV 175 (305)
T ss_dssp SCBHHHHHHHS-CTTCSCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEECTTCCEEECSCCSCCCCCGGGGGCCC
T ss_pred cCCchhhhhhc-cCCCCCHHHHHHHHHHHHHHHHHHHhCC-EEecCCCccEEEEcCCCCeeecchhhhhhhcccccCCCc
Confidence 98777654433 4667999999999999999999999999 999999999999999999999999998865433 356
Q ss_pred ccCccCCCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhh---------------------hc
Q 014478 145 STNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLM---------------------DS 203 (424)
Q Consensus 145 ~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~---------------------~~ 203 (424)
.||+.|||||++.+.+++.++|||||||++|||++|+.||........-........ ..
T Consensus 176 ~gT~~Y~APE~~~~~~y~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (305)
T d1blxa_ 176 VVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPRQAFHSKSA 255 (305)
T ss_dssp CCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCGGGSCTTCSSCGGGSCCCCC
T ss_pred ccChhhcCcchhcCCCCChhehhhchHHHHHHHHHCCCCCCCCCHHHHHHHHHHhhCCCchhcccccccchhhhhccccc
Confidence 789999999999999999999999999999999999999876422211111100000 00
Q ss_pred ccCCCCCchhHHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 014478 204 ALEGHFSNDEGTELVRLASRCLQSEARERPNAKSLVIS 241 (424)
Q Consensus 204 ~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~~~~~ 241 (424)
......+..+++++.+||.+||+.||++|||++|+++|
T Consensus 256 ~~~~~~~~~~s~~~~dli~~mL~~dP~~R~sa~e~L~H 293 (305)
T d1blxa_ 256 QPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSH 293 (305)
T ss_dssp CCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred cchhhccccCCHHHHHHHHHHCcCChhHCcCHHHHhcC
Confidence 00111234567889999999999999999999999865
|
| >d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase p38-gamma species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.1e-44 Score=340.96 Aligned_cols=235 Identities=16% Similarity=0.194 Sum_probs=185.8
Q ss_pred CCCcccceeee--ecceecccccCCCc---hhhhHHHHHHHHHhcCCCcCcceeEEEEEeCC------eeeEEEecCCCC
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESSD---LGETLNLEEAKAVGNLRSERLANLIGCCYEAD------ERLLVAEFMPNE 70 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~~---~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~------~~~lv~e~~~~g 70 (424)
|+||.||++.+ .+..||+|++.... ...+.+.+|+++|++++|||||+++++|...+ ..++||||+ ++
T Consensus 29 G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~hpniv~l~~~~~~~~~~~~~~~~~lv~e~~-~~ 107 (346)
T d1cm8a_ 29 GAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFTDFYLVMPFM-GT 107 (346)
T ss_dssp ----CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCCCCEEEEECC-SE
T ss_pred CCCeEEEEEEECCCCCEEEEEEEchhhcChHHHHHHHHHHHHHHhcCCCCeeEEEEEeccCccccccceEEEEEecc-cc
Confidence 89999999997 47889999886433 34567889999999999999999999998654 469999999 66
Q ss_pred CHHhHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCC-CccccCcc
Q 014478 71 TLAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG-KSYSTNLA 149 (424)
Q Consensus 71 sL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~-~~~~gt~~ 149 (424)
+|..++. ..++++..+..++.||+.||.|||+++ |+||||||+|||++.++.+|++|||+++..... ....||+.
T Consensus 108 ~l~~~~~---~~~l~~~~~~~~~~qi~~aL~~LH~~~-IiHrDiKp~NIL~~~~~~~kl~Dfg~a~~~~~~~~~~~~t~~ 183 (346)
T d1cm8a_ 108 DLGKLMK---HEKLGEDRIQFLVYQMLKGLRYIHAAG-IIHRDLKPGNLAVNEDCELKILDFGLARQADSEMTGYVVTRW 183 (346)
T ss_dssp EHHHHHH---HCCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEECTTCCEEECCCTTCEECCSSCCSSCSCGG
T ss_pred cHHHHHH---hccccHHHHHHHHHHHHHHHHHHHhCC-CcccccCcchhhcccccccccccccceeccCCcccccccccc
Confidence 8888874 357999999999999999999999999 999999999999999999999999999876644 45678999
Q ss_pred CCCccccccC-CCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhh----------------------hhHhhhc---
Q 014478 150 FTPPEYMRTG-RVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKN----------------------FLLLMDS--- 203 (424)
Q Consensus 150 y~aPE~~~~~-~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~----------------------~~~~~~~--- 203 (424)
|+|||++.+. .++.++||||+||++|+|++|+.||........-... .......
T Consensus 184 y~aPE~~~~~~~~~~~~DiwSlGvil~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (346)
T d1cm8a_ 184 YRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSDEAKNYMKGLPELEK 263 (346)
T ss_dssp GCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHTCSCHHHHHHHHHSCCCCC
T ss_pred ccCHHHHcCCCCCCccchhhcchHHHHHHHHCcCCCCCCChHHHHHHHHhccCCCcHHHHhhhcchhhhhhhccCCcccc
Confidence 9999998864 4689999999999999999999888754211110000 0000000
Q ss_pred ccCCCCCchhHHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 014478 204 ALEGHFSNDEGTELVRLASRCLQSEARERPNAKSLVIS 241 (424)
Q Consensus 204 ~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~~~~~ 241 (424)
..........++++.+||.+||..||++|||++++++|
T Consensus 264 ~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~eiL~H 301 (346)
T d1cm8a_ 264 KDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAH 301 (346)
T ss_dssp CCGGGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred cchHHhccCCCHHHHHHHHHHCcCChhHCcCHHHHhcC
Confidence 00011223457889999999999999999999999976
|
| >d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
Probab=100.00 E-value=1.9e-44 Score=330.80 Aligned_cols=244 Identities=12% Similarity=0.053 Sum_probs=196.1
Q ss_pred CCCcccceeee--ecceecccccCCCchhhhHHHHHHHHHhcCCC-cCcceeEEEEEeCCeeeEEEecCCCCCHHhHhcc
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESSDLGETLNLEEAKAVGNLRS-ERLANLIGCCYEADERLLVAEFMPNETLAKHLFH 78 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~~~~~~~~~~E~~~l~~l~h-~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~ 78 (424)
||||.||++.+ .+..+|+|++.... ....+.+|++.+..++| +||+.+++++..+...++||||+ +++|.+++..
T Consensus 16 G~fG~Vy~a~~~~~~~~vAvK~~~~~~-~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~~vme~~-~~~l~~~~~~ 93 (293)
T d1csna_ 16 GSFGVIFEGTNLLNNQQVAIKFEPRRS-DAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVIDLL-GPSLEDLLDL 93 (293)
T ss_dssp CSSCEEEEEEETTTTEEEEEEEEECCT-TSCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEEECC-CCBHHHHHHH
T ss_pred CCCeEEEEEEECCCCCEEEEEEEcccc-CcHHHHHHHHHHHHhcCCCCCCEEEEEeecCCccEEEEEec-CCCHHHHHHh
Confidence 99999999987 46778888765433 34567889999999965 89999999999999999999999 6899998865
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecC-----CCCeEEccccccccCCC-----------CC
Q 014478 79 WETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDK-----DGNPRLSSFGLMKNSRD-----------GK 142 (424)
Q Consensus 79 ~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~-----~~~~kl~Dfg~~~~~~~-----------~~ 142 (424)
.+..++..++..++.|++.||.|||+++ |+||||||+|||++. ++.+||+|||+++.... ..
T Consensus 94 -~~~~~~~~~~~~i~~q~~~~l~~lH~~g-iiHrDiKp~Nili~~~~~~~~~~vkl~DFG~a~~~~~~~~~~~~~~~~~~ 171 (293)
T d1csna_ 94 -CGRKFSVKTVAMAAKQMLARVQSIHEKS-LVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPVTKQHIPYREKK 171 (293)
T ss_dssp -TTTCCCHHHHHHHHHHHHHHHHHHHTTT-EECCCCCGGGEEECCSSSTTTTCEEECCCTTCEESBCTTTCCBCCCCCCC
T ss_pred -hccchhhHHHHHHHHHHHHHHHHHHHCC-ceeccCCccceeecCcccccCCceEEcccceeEEcccCccccceeecccC
Confidence 4567999999999999999999999999 999999999999964 56899999999986432 12
Q ss_pred ccccCccCCCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHH--hhhhhhHhhhcccCCCCCchhHHHHHHH
Q 014478 143 SYSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLI--RSKNFLLLMDSALEGHFSNDEGTELVRL 220 (424)
Q Consensus 143 ~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~l~~l 220 (424)
...||+.|||||++.+..++.++|||||||++|||++|+.||........ .................+..+|+++.++
T Consensus 172 ~~~GT~~y~aPE~~~~~~~~~~~DiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~p~~l~~i 251 (293)
T d1csna_ 172 NLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQSTPLRELCAGFPEEFYKY 251 (293)
T ss_dssp CCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHHHHHHHHHHSCHHHHTTTSCHHHHHH
T ss_pred ceEEchhhcCHHHhcCCCCChHHHHHHhhHHHHHHHhCCCcCCCccchhHHHHHHHHHhccCCCChHHhcCCCCHHHHHH
Confidence 34689999999999998999999999999999999999998864311100 0011111111111112234567899999
Q ss_pred HHHhcccCcCCCCCHHHHHHHHHHHhhhh
Q 014478 221 ASRCLQSEARERPNAKSLVISLMSLQKEA 249 (424)
Q Consensus 221 i~~cl~~dp~~Rps~~~~~~~l~~~~~~~ 249 (424)
+..|+..+|++||+++.+.+.|..+.+..
T Consensus 252 i~~~~~~~~~~rP~y~~l~~~l~~~~~~~ 280 (293)
T d1csna_ 252 MHYARNLAFDATPDYDYLQGLFSKVLERL 280 (293)
T ss_dssp HHHHHHCCTTCCCCHHHHHHHHHHHHHHT
T ss_pred HHHHhcCCcccCcCHHHHHHHHHHHHHHc
Confidence 99999999999999999999888877653
|
| >d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase Erk2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.4e-44 Score=339.64 Aligned_cols=236 Identities=16% Similarity=0.171 Sum_probs=183.8
Q ss_pred CCCcccceeee--ecceecccccCCCc--hhhhHHHHHHHHHhcCCCcCcceeEEEEEeCC----eeeEEEecCCCCCHH
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESSD--LGETLNLEEAKAVGNLRSERLANLIGCCYEAD----ERLLVAEFMPNETLA 73 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~~--~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~----~~~lv~e~~~~gsL~ 73 (424)
|+||.||++.. .+..||+|++.... ...+.+.+|+.+|++++||||+++++++.... ..+++|+++.||+|.
T Consensus 19 G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~Ei~il~~l~hp~iv~~~~~~~~~~~~~~~~~~l~~~~~~g~L~ 98 (345)
T d1pmea_ 19 GAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYLVTHLMGADLY 98 (345)
T ss_dssp --CCCEEEEEETTTCSEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCCEEEEEECCCEEHH
T ss_pred ccCeEEEEEEECCCCcEEEEEEEehhcChHHHHHHHHHHHHHHHcCCCCCCcEEEEEeeccccccceEEEEEeecCCchh
Confidence 89999999987 57889999886443 34568899999999999999999999997653 234555667799999
Q ss_pred hHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCC-------CCcccc
Q 014478 74 KHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRD-------GKSYST 146 (424)
Q Consensus 74 ~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~-------~~~~~g 146 (424)
+++.. .++++.++..++.|++.||.|||+++ ||||||||+|||++.++.+||+|||+++.... .....|
T Consensus 99 ~~l~~---~~l~~~~i~~i~~qil~al~yLH~~~-iiHRDIKp~NILl~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~g 174 (345)
T d1pmea_ 99 KLLKT---QHLSNDHICYFLYQILRGLKYIHSAN-VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 174 (345)
T ss_dssp HHHHH---CCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEECTTCCEEECCCTTCEECCGGGCBCCTTCCCCS
T ss_pred hhhhc---CCCCHHHHHHHHHHHHHHHHHHHHCC-CcCCCCCcceEEECCCCCEEEcccCceeeccCCCccceeeccccc
Confidence 99964 47999999999999999999999999 99999999999999999999999999876542 234568
Q ss_pred CccCCCccccccC-CCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhH-------------------hhhccc-
Q 014478 147 NLAFTPPEYMRTG-RVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLL-------------------LMDSAL- 205 (424)
Q Consensus 147 t~~y~aPE~~~~~-~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~-------------------~~~~~~- 205 (424)
|+.|+|||++... .++.++||||+||++|+|++|+.||............... ......
T Consensus 175 t~~y~aPE~l~~~~~~~~~~DiwSlG~il~eml~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (345)
T d1pmea_ 175 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPH 254 (345)
T ss_dssp CGGGCCGGGTTTBCSCSTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHTCCCHHHHHHHHTSCC
T ss_pred cceechHHHhhcCCCCCchhhhhccCceehHHhhCCCCCCCCCHHHHHHHHhhhccCCChhhhhhhhhhhhhcccccCCc
Confidence 9999999998654 5788999999999999999999888754221111100000 000000
Q ss_pred CCC-----CCchhHHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 014478 206 EGH-----FSNDEGTELVRLASRCLQSEARERPNAKSLVIS 241 (424)
Q Consensus 206 ~~~-----~~~~~~~~l~~li~~cl~~dp~~Rps~~~~~~~ 241 (424)
... ....+++++.+|+.+||+.||.+|||+.+++++
T Consensus 255 ~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~ta~e~L~h 295 (345)
T d1pmea_ 255 KNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAH 295 (345)
T ss_dssp CCCCCHHHHCTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred cCCCCHHHhCCCCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 000 112346789999999999999999999999865
|
| >d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=3.5e-44 Score=330.70 Aligned_cols=243 Identities=15% Similarity=0.092 Sum_probs=187.9
Q ss_pred CCCcccceeee--ecceecccccCCCchhhhHHHHHHHHHhcCCCcCc-ceeEEEEEeCCeeeEEEecCCCCCHHhHhcc
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESSDLGETLNLEEAKAVGNLRSERL-ANLIGCCYEADERLLVAEFMPNETLAKHLFH 78 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i-v~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~ 78 (424)
||||.||++.+ .+..||+|++.... ....+..|+++++.++|+|+ +.+.+++.+++..++||||+ +++|...+..
T Consensus 18 G~fG~Vy~a~~~~~~~~vAvK~~~~~~-~~~~~~~E~~i~~~l~~~~~i~~~~~~~~~~~~~~ivme~~-~~~l~~~~~~ 95 (299)
T d1ckia_ 18 GSFGDIYLGTDIAAGEEVAIKLECVKT-KHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMELL-GPSLEDLFNF 95 (299)
T ss_dssp CSSSEEEEEEETTTTEEEEEEEEESCT-TSCCHHHHHHHHHHSTTSTTCCCEEEEEEETTEEEEEEECC-CCBHHHHHHH
T ss_pred CCCcEEEEEEECCCCCEEEEEEEchhc-cCHHHHHHHHHHHHccCCCcccEEEEEEecCCEEEEEEEEc-CCchhhhhhh
Confidence 89999999987 46788888776543 34568899999999987765 55556667778889999999 5577776644
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeec---CCCCeEEccccccccCCCC-----------Ccc
Q 014478 79 WETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFD---KDGNPRLSSFGLMKNSRDG-----------KSY 144 (424)
Q Consensus 79 ~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~---~~~~~kl~Dfg~~~~~~~~-----------~~~ 144 (424)
....+++.++..++.|++.||+|||+++ ||||||||+|||++ .+..+||+|||+++..... ...
T Consensus 96 -~~~~~~~~~~~~~~~qi~~~l~~lH~~~-iiHrDiKp~NIl~~~~~~~~~vkl~DFG~a~~~~~~~~~~~~~~~~~~~~ 173 (299)
T d1ckia_ 96 -CSRKFSLKTVLLLADQMISRIEYIHSKN-FIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNL 173 (299)
T ss_dssp -TTTCCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCCGGGEEECCGGGTTCEEECCCSSCEECBCTTTCCBCCCCBCCSC
T ss_pred -ccCCCcHHHHHHHHHHHHHHHHHHHHCC-eeeccCCHhhccccccCCCceeeeeccCcceeccccccccceeccccCCc
Confidence 3567999999999999999999999999 99999999999985 3557999999999865422 234
Q ss_pred ccCccCCCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhh--hhhHhhhcccCCCCCchhHHHHHHHHH
Q 014478 145 STNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSK--NFLLLMDSALEGHFSNDEGTELVRLAS 222 (424)
Q Consensus 145 ~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~l~~li~ 222 (424)
.||+.|||||++.+..++.++|||||||++|||++|+.||........... ..............+..+|+++.+++.
T Consensus 174 ~gt~~y~aPE~~~~~~~~~~~DiwSlG~~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~li~ 253 (299)
T d1ckia_ 174 TGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVLCKGYPSEFATYLN 253 (299)
T ss_dssp CCCSSSCCHHHHTTBCCCHHHHHHHHHHHHHHHHHSSCTTCCCC-------HHHHHHHHHHSCHHHHTTTSCHHHHHHHH
T ss_pred CCCccccCHHHHhCCCCCChhhEEecCHHHHHHHhCCCcccccchHHHHHHHHHhhcccCCCChhHhccCCCHHHHHHHH
Confidence 689999999999988999999999999999999999988875422111111 000110011111123456789999999
Q ss_pred HhcccCcCCCCCHHHHHHHHHHHhhh
Q 014478 223 RCLQSEARERPNAKSLVISLMSLQKE 248 (424)
Q Consensus 223 ~cl~~dp~~Rps~~~~~~~l~~~~~~ 248 (424)
+||+.||++||+++++.+.|+.+...
T Consensus 254 ~cl~~~p~~RP~~~~i~~~l~~~~~~ 279 (299)
T d1ckia_ 254 FCRSLRFDDKPDYSYLRQLFRNLFHR 279 (299)
T ss_dssp HHHHSCTTCCCCHHHHHHHHHHHHHH
T ss_pred HHccCChhHCcCHHHHHHHHHHHHHH
Confidence 99999999999999999888876543
|
| >d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell division protein kinase 9, CDK9 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=5.8e-44 Score=332.21 Aligned_cols=236 Identities=17% Similarity=0.166 Sum_probs=182.5
Q ss_pred CCCcccceeee--ecceecccccCCCc---hhhhHHHHHHHHHhcCCCcCcceeEEEEEe--------CCeeeEEEecCC
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESSD---LGETLNLEEAKAVGNLRSERLANLIGCCYE--------ADERLLVAEFMP 68 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~~---~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~--------~~~~~lv~e~~~ 68 (424)
|+||.||++.+ .+..||+|++.... .....+.+|+++|++++||||+++++++.. ....++||||+.
T Consensus 21 G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~h~nii~~~~~~~~~~~~~~~~~~~~~iv~e~~~ 100 (318)
T d3blha1 21 GTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCE 100 (318)
T ss_dssp CSSSEEEEEEETTTCCEEEEEEC----CTTSSCHHHHHHHHHHHHCCCTTBCCEEEEEEC----------CEEEEEECCC
T ss_pred CcCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHHhcCCCccceEeeeecccccccccCceEEEEEeccC
Confidence 99999999998 46788998874432 235678899999999999999999999865 345789999998
Q ss_pred CCCHHhHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCC-------
Q 014478 69 NETLAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG------- 141 (424)
Q Consensus 69 ~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~------- 141 (424)
++.+..... ....+++.++..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++.....
T Consensus 101 ~~~~~~~~~--~~~~~~~~~~~~i~~qil~~l~~lH~~~-ivHrDlKp~NILl~~~~~~kl~dfg~~~~~~~~~~~~~~~ 177 (318)
T d3blha1 101 HDLAGLLSN--VLVKFTLSEIKRVMQMLLNGLYYIHRNK-ILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNR 177 (318)
T ss_dssp EEHHHHHTC--TTCCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEECTTSCEEECCCTTCEECCC-----CCC
T ss_pred CCccchhhh--cccccccHHHHHHHHHHHHHHHHhccCC-EEecCcCchheeecCCCcEEeeecceeeeccccccccccc
Confidence 877665543 3567999999999999999999999999 999999999999999999999999999765421
Q ss_pred -CccccCccCCCccccccC-CCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhcccC-------------
Q 014478 142 -KSYSTNLAFTPPEYMRTG-RVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALE------------- 206 (424)
Q Consensus 142 -~~~~gt~~y~aPE~~~~~-~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~------------- 206 (424)
....||+.|+|||++.+. .++.++|||||||++|||++|+.||............ .........
T Consensus 178 ~~~~~gT~~Y~aPE~~~~~~~~~~k~DiwSlGvil~el~~g~~pf~~~~~~~~~~~i-~~~~~~~~~~~~~~~~~~~~~~ 256 (318)
T d3blha1 178 YTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALI-SQLCGSITPEVWPNVDNYELYE 256 (318)
T ss_dssp CCSCCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHH-HHHHCCCCTTTSTTCCCC----
T ss_pred ccceecCHHHhhHHHHcCCCCCCcHHHcccCCceeeeHhhCCCCCCCCCHHHHHHHH-HHhcCCCChhhccccchhhhhh
Confidence 234689999999998765 5899999999999999999999888754221111111 110000000
Q ss_pred -----CCCCc---------hhHHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 014478 207 -----GHFSN---------DEGTELVRLASRCLQSEARERPNAKSLVIS 241 (424)
Q Consensus 207 -----~~~~~---------~~~~~l~~li~~cl~~dp~~Rps~~~~~~~ 241 (424)
..... ..++++.+||.+||+.||++|||++|+++|
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~sa~elL~H 305 (318)
T d3blha1 257 KLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNH 305 (318)
T ss_dssp ---CCSSCCBCHHHHHHHHHCCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred hhcccccccccchhhhccccCCHHHHHHHHHHCcCChhHCcCHHHHHcC
Confidence 00000 124567899999999999999999999965
|
| >d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Glycogen synthase kinase-3 beta (Gsk3b) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.3e-44 Score=340.54 Aligned_cols=236 Identities=19% Similarity=0.158 Sum_probs=182.8
Q ss_pred CCCcccceeee--ecceecccccCCCchhhhHHHHHHHHHhcCCCcCcceeEEEEEeC------CeeeEEEecCCCCCHH
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESSDLGETLNLEEAKAVGNLRSERLANLIGCCYEA------DERLLVAEFMPNETLA 73 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~------~~~~lv~e~~~~gsL~ 73 (424)
||||.||++.+ .+..||+|++..... .+.+|+++|++++||||++++++|... ...+||||||+++.+.
T Consensus 31 G~fg~Vy~a~~~~~~~~vAiK~i~~~~~---~~~~Ei~il~~l~h~niv~~~~~~~~~~~~~~~~~~~lv~Ey~~~~~~~ 107 (350)
T d1q5ka_ 31 GSFGVVYQAKLCDSGELVAIKKVLQDKR---FKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYR 107 (350)
T ss_dssp ETTEEEEEEEETTTCCEEEEEEEECCSS---SCCHHHHHHHHCCCTTBCCEEEEEEEC--CCSCCEEEEEEECCSEEHHH
T ss_pred CcCeEEEEEEECCCCCEEEEEEECccch---HHHHHHHHHHhcCCCCCCcEEEEEEecCccCCceEEEEEEeccCCccHH
Confidence 89999999998 567789988865442 345799999999999999999998653 2468999999876443
Q ss_pred hHhc-cCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCC-CeEEccccccccCCCC---CccccCc
Q 014478 74 KHLF-HWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDG-NPRLSSFGLMKNSRDG---KSYSTNL 148 (424)
Q Consensus 74 ~~l~-~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~-~~kl~Dfg~~~~~~~~---~~~~gt~ 148 (424)
.+.. ......+++.++..++.||+.||+|||+++ |+||||||+|||++.++ .+||+|||+++..... ....||.
T Consensus 108 ~l~~~~~~~~~l~~~~~~~i~~qil~aL~yLH~~~-IiHrDiKp~NILl~~~~~~~kl~DFG~a~~~~~~~~~~~~~gt~ 186 (350)
T d1q5ka_ 108 VARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG-ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSR 186 (350)
T ss_dssp HHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTTT-EECCCCCGGGEEECTTTCCEEECCCTTCEECCTTSCCCSCCSCT
T ss_pred HHHhhhhccCCCCHHHHHHHHHHHHHHHHHHHhcC-CcccCCCcceEEEecCCCceeEecccchhhccCCcccccccccc
Confidence 3321 113567999999999999999999999999 99999999999999775 8999999999876533 3457899
Q ss_pred cCCCcccccc-CCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhh-----------hHhhhc----c--------
Q 014478 149 AFTPPEYMRT-GRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNF-----------LLLMDS----A-------- 204 (424)
Q Consensus 149 ~y~aPE~~~~-~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~-----------~~~~~~----~-------- 204 (424)
.|+|||.+.+ ..++.++|||||||++|||++|+.||........-.... ...... .
T Consensus 187 ~y~aPE~~~~~~~~~~~~DIwSlG~il~el~~g~~pf~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (350)
T d1q5ka_ 187 YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHP 266 (350)
T ss_dssp TSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCC---CCCCCCCCCCC
T ss_pred cccChHHhhcccCCCcceeecccceEEEehhhCCCCCCCCCHHHHHHHHHHHhCCChHHhhhhhccchhhccccccccCc
Confidence 9999998875 468999999999999999999998887642211111000 000000 0
Q ss_pred cCCCCCchhHHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 014478 205 LEGHFSNDEGTELVRLASRCLQSEARERPNAKSLVIS 241 (424)
Q Consensus 205 ~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~~~~~ 241 (424)
.........++++.+||.+||..||++|||+.|+++|
T Consensus 267 ~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~H 303 (350)
T d1q5ka_ 267 WTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAH 303 (350)
T ss_dssp GGGTSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred hhhhcccCCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 0011123467889999999999999999999999875
|
| >d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Ribosomal protein S6 kinase alpha 5, Msk1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=7.9e-45 Score=337.18 Aligned_cols=235 Identities=17% Similarity=0.205 Sum_probs=191.9
Q ss_pred CCCcccceeee-----ecceecccccCCCc-----hhhhHHHHHHHHHhcCCC-cCcceeEEEEEeCCeeeEEEecCCCC
Q 014478 2 GGRCSKFSICW-----FHCHLKSSVLESSD-----LGETLNLEEAKAVGNLRS-ERLANLIGCCYEADERLLVAEFMPNE 70 (424)
Q Consensus 2 G~~g~v~~~~~-----~~~~v~~~~~~~~~-----~~~~~~~~E~~~l~~l~h-~~iv~~~~~~~~~~~~~lv~e~~~~g 70 (424)
|+||.||++.. .+..+|+|++.... ...+.+.+|+++|++++| |||+++++++.+....+++|||+.+|
T Consensus 35 G~fg~Vy~~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~~E~~il~~l~h~pnIv~~~~~~~~~~~~~~v~e~~~~~ 114 (322)
T d1vzoa_ 35 GAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTETKLHLILDYINGG 114 (322)
T ss_dssp TTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETTEEEEEECCCCSC
T ss_pred CCCeEEEEEEECccCCCCcEEEEEEEehHHhccchHHHHHHHHHHHHHHhccCCCeEEEeeeeeccCCceeeeeeccccc
Confidence 99999999976 35678888875432 345678899999999966 89999999999999999999999999
Q ss_pred CHHhHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCC-----Cccc
Q 014478 71 TLAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG-----KSYS 145 (424)
Q Consensus 71 sL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~-----~~~~ 145 (424)
+|.+++.. .+.+++..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++..... ....
T Consensus 115 ~L~~~i~~--~~~~~e~~~~~~~~Qi~~al~~lH~~~-ivHrDiKp~Nill~~~~~vkL~DFG~a~~~~~~~~~~~~~~~ 191 (322)
T d1vzoa_ 115 ELFTHLSQ--RERFTEHEVQIYVGEIVLALEHLHKLG-IIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETERAYDFC 191 (322)
T ss_dssp BHHHHHHH--HSCCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEECTTSCEEESCSSEEEECCGGGGGGGCGGG
T ss_pred HHHHHHHh--cccccHHHHHHHHHHHHHHHHHhhcCC-EEeccCCccceeecCCCCEEEeeccchhhhcccccccccccc
Confidence 99999975 456789999999999999999999999 999999999999999999999999999865432 3456
Q ss_pred cCccCCCccccccC--CCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhhcccCCCCCchhHHHHHHHHHH
Q 014478 146 TNLAFTPPEYMRTG--RVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASR 223 (424)
Q Consensus 146 gt~~y~aPE~~~~~--~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 223 (424)
|++.|++||.+.+. .++.++|||||||++|+|++|+.||................ .......+..+++++.+|+.+
T Consensus 192 g~~~~~~pe~~~~~~~~~~~ksDIWSlG~iLyelltG~~PF~~~~~~~~~~~i~~~~--~~~~~~~~~~~s~~~~~li~~ 269 (322)
T d1vzoa_ 192 GTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRI--LKSEPPYPQEMSALAKDLIQR 269 (322)
T ss_dssp SCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCCHHHHHHHH--HHCCCCCCTTSCHHHHHHHHH
T ss_pred cccccchhHHhhcCCcCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhc--ccCCCCCcccCCHHHHHHHHH
Confidence 89999999999765 46889999999999999999999987642221111111111 122334566789999999999
Q ss_pred hcccCcCCCCC-----HHHHHHH
Q 014478 224 CLQSEARERPN-----AKSLVIS 241 (424)
Q Consensus 224 cl~~dp~~Rps-----~~~~~~~ 241 (424)
||+.||++||| ++|+++|
T Consensus 270 ~l~~dP~~R~s~~~~t~~eil~H 292 (322)
T d1vzoa_ 270 LLMKDPKKRLGCGPRDADEIKEH 292 (322)
T ss_dssp HTCSSGGGSTTSSTTTHHHHHTS
T ss_pred HcccCHHHcCCCCcccHHHHHcC
Confidence 99999999994 7888764
|
| >d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase CK2, alpha subunit species: Rattus norvegicus [TaxId: 10116]
Probab=100.00 E-value=1.4e-43 Score=331.02 Aligned_cols=232 Identities=17% Similarity=0.182 Sum_probs=185.1
Q ss_pred CCCcccceeee--ecceecccccCCCchhhhHHHHHHHHHhcCC-CcCcceeEEEEEeC--CeeeEEEecCCCCCHHhHh
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESSDLGETLNLEEAKAVGNLR-SERLANLIGCCYEA--DERLLVAEFMPNETLAKHL 76 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~--~~~~lv~e~~~~gsL~~~l 76 (424)
|+||.||++.+ .+..||+|++.... .+.+.+|+++|+.++ ||||+++++++... ...++||||+++++|..+.
T Consensus 46 G~fg~V~~a~~~~~~~~vAiK~i~~~~--~~~~~~Ei~il~~l~~hpnIv~~~~~~~~~~~~~~~~v~e~~~~~~L~~~~ 123 (328)
T d3bqca1 46 GKYSEVFEAINITNNEKVVVKILKPVK--KKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVFEHVNNTDFKQLY 123 (328)
T ss_dssp CSSEEEEEEEETTTTEEEEEEEECSSC--HHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCSEEEEEECCCSCBGGGTT
T ss_pred CcCeEEEEEEECCCCCEEEEEEECHHH--HHHHHHHHHHHHhccCCCCCcEEEEEEEecCCCceeEEEeecCCCcHHHHh
Confidence 89999999987 47788999886543 567889999999995 99999999999754 4588999999999997764
Q ss_pred ccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCC-CeEEccccccccCCCC---CccccCccCCC
Q 014478 77 FHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDG-NPRLSSFGLMKNSRDG---KSYSTNLAFTP 152 (424)
Q Consensus 77 ~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~-~~kl~Dfg~~~~~~~~---~~~~gt~~y~a 152 (424)
+.+++.++..++.||+.||.|||+++ |+||||||+|||++.++ .+||+|||+++..... ....+|+.|+|
T Consensus 124 -----~~l~e~~i~~i~~qil~aL~~LH~~g-IvHrDiKp~NILi~~~~~~vkl~DFG~a~~~~~~~~~~~~~~t~~y~a 197 (328)
T d3bqca1 124 -----QTLTDYDIRFYMYEILKALDYCHSMG-IMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKG 197 (328)
T ss_dssp -----TSCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEEETTTTEEEECCGGGCEECCTTCCCCSCCSCGGGCC
T ss_pred -----cCCCHHHHHHHHHHHHHHHHHHhhcc-cccccccccceEEcCCCCeeeecccccceeccCCCcccccccCccccC
Confidence 46999999999999999999999999 99999999999998665 5899999999876543 44568999999
Q ss_pred ccccccCC-CCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhH------------------------h-------
Q 014478 153 PEYMRTGR-VTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLL------------------------L------- 200 (424)
Q Consensus 153 PE~~~~~~-~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~------------------------~------- 200 (424)
||.+.+.. ++.++||||+||++|+|++|+.||............... .
T Consensus 198 PE~~~~~~~~~~~~DiwslG~~l~e~~~g~~pf~~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (328)
T d3bqca1 198 PELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRK 277 (328)
T ss_dssp HHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTCCCCGGGGGTCCCCCCC
T ss_pred cccccCCCCCCcccchhhhhhhhHHhccCCCCCCCCchhHHHHHHHHHHHCCchhhhhhhhcccccCcccchhccccccc
Confidence 99988654 799999999999999999999887653211100000000 0
Q ss_pred -hhcccCCCCCchhHHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 014478 201 -MDSALEGHFSNDEGTELVRLASRCLQSEARERPNAKSLVIS 241 (424)
Q Consensus 201 -~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~~~~~ 241 (424)
............+++++.+||.+||..||++|||++|+++|
T Consensus 278 ~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~e~L~H 319 (328)
T d3bqca1 278 RWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEH 319 (328)
T ss_dssp CGGGGCCTTTGGGCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred chhhcccccccccCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 00001111223467889999999999999999999999864
|
| >d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK5 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.8e-43 Score=323.73 Aligned_cols=237 Identities=16% Similarity=0.150 Sum_probs=190.7
Q ss_pred CCCcccceeee--ecceecccccCCCc---hhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeeeEEEecCCCCCHHhHh
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESSD---LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHL 76 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~~---~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~l 76 (424)
|+||.||++.+ .+..||+|++.... .....+.+|+.+|+.++||||+++++++.+....++|||++.+++|..++
T Consensus 13 G~fg~V~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~iv~~~~~~~~l~~~~ 92 (292)
T d1unla_ 13 GTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEFCDQDLKKYFD 92 (292)
T ss_dssp CSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCSEEHHHHHH
T ss_pred CcCeEEEEEEECCCCcEEEEEEEehhhCChHHHHHHHHHHHHHHhcCcCCEEeeccccccccceeEEeeecccccccccc
Confidence 89999999998 45668888874333 33578899999999999999999999999999999999999999998887
Q ss_pred ccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCCC----ccccCccCCC
Q 014478 77 FHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGK----SYSTNLAFTP 152 (424)
Q Consensus 77 ~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~~----~~~gt~~y~a 152 (424)
.. .+.+++..+..++.|++.||+|||+++ |+||||||+|||++.++.+||+|||.++...... ...++..|+|
T Consensus 93 ~~--~~~~~~~~~~~~~~q~~~aL~~lH~~~-IvHrDiKP~NIli~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~ 169 (292)
T d1unla_ 93 SC--NGDLDPEIVKSFLFQLLKGLGFCHSRN-VLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCYSAEVVTLWYRP 169 (292)
T ss_dssp HT--TTCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEECTTCCEEECCCTTCEECCSCCSCCCSCCSCGGGCC
T ss_pred cc--ccccchhHHHHHHHHHHHHHHHhhcCC-EeeecccCcccccccCCceeeeecchhhcccCCCccceeeccccchhh
Confidence 64 568899999999999999999999999 9999999999999999999999999998765432 3356789999
Q ss_pred ccccccCC-CCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHhhh------------------------cccCC
Q 014478 153 PEYMRTGR-VTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMD------------------------SALEG 207 (424)
Q Consensus 153 PE~~~~~~-~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~------------------------~~~~~ 207 (424)
||.+.+.. ++.++|||||||++|||++|+.||............+..... .....
T Consensus 170 pe~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (292)
T d1unla_ 170 PDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKPYPMYPATTSLV 249 (292)
T ss_dssp HHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHHHHHHHCCCCTTTCTTGGGSTTCCCCCCCCTTCCCT
T ss_pred hhHhccCCCCCchhhccccchHHHHHhhCCCCCCCCCCHHHHHHHHHhhcCCCChhhhhhhhhcccccccccccccchhh
Confidence 99988665 689999999999999999999886432111100001110000 00111
Q ss_pred CCCchhHHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 014478 208 HFSNDEGTELVRLASRCLQSEARERPNAKSLVIS 241 (424)
Q Consensus 208 ~~~~~~~~~l~~li~~cl~~dp~~Rps~~~~~~~ 241 (424)
.....+++++.+|+.+||+.||.+|||++|+++|
T Consensus 250 ~~~~~~s~~~~dll~~mL~~dP~~R~sa~e~L~H 283 (292)
T d1unla_ 250 NVVPKLNATGRDLLQNLLKCNPVQRISAEEALQH 283 (292)
T ss_dssp TTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred hccccCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 2233467889999999999999999999999865
|
| >d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-jun N-terminal kinase (jnk3s) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.5e-43 Score=331.37 Aligned_cols=234 Identities=13% Similarity=0.154 Sum_probs=178.1
Q ss_pred CCCcccceeee--ecceecccccCCC---chhhhHHHHHHHHHhcCCCcCcceeEEEEEeC------CeeeEEEecCCCC
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESS---DLGETLNLEEAKAVGNLRSERLANLIGCCYEA------DERLLVAEFMPNE 70 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~---~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~------~~~~lv~e~~~~g 70 (424)
|+||.||.+.+ .+..||+|++... ......+.+|+.+|++++||||++++++|... ...|+||||+.++
T Consensus 28 G~fg~V~~~~d~~t~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~~~~~f~~~~~~~~~~~~~iv~Ey~~~~ 107 (355)
T d2b1pa1 28 GAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDAN 107 (355)
T ss_dssp C--CEEEEEEETTTTEEEEEEEEESTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCCEEEEEEECCSEE
T ss_pred CcCeEEEEEEECCCCCEEEEEEEChhhcCHHHHHHHHHHHHHHHhcCCCCeeEEEEEEecccccccCceeEEEEeccchH
Confidence 89999999998 4788999988644 23456788999999999999999999999643 5789999999775
Q ss_pred CHHhHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCC---CccccC
Q 014478 71 TLAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG---KSYSTN 147 (424)
Q Consensus 71 sL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~---~~~~gt 147 (424)
.+ +.+ ...+++..+..++.||+.||.|||++| |+||||||+|||++.++.+|++|||+++..... ....+|
T Consensus 108 l~-~~~----~~~~~~~~i~~~~~qil~gl~~LH~~g-iiHrDlKP~Nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~t 181 (355)
T d2b1pa1 108 LC-QVI----QMELDHERMSYLLYQMLCGIKHLHSAG-IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVT 181 (355)
T ss_dssp HH-HHH----TSCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEECTTCCEEECCCCC---------------C
T ss_pred HH-Hhh----hcCCCHHHHHHHHHHHHHHHHHhhhcc-cccccCCccccccccccceeeechhhhhcccccccccccccc
Confidence 55 444 246899999999999999999999999 999999999999999999999999998765543 345689
Q ss_pred ccCCCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhh------------------hHhhhc------
Q 014478 148 LAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNF------------------LLLMDS------ 203 (424)
Q Consensus 148 ~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~------------------~~~~~~------ 203 (424)
+.|+|||++.+..++.++||||+||++|+|++|+.||............. ......
T Consensus 182 ~~y~aPE~l~~~~~~~~~DiwSlG~~l~ell~g~~pF~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (355)
T d2b1pa1 182 RYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAG 261 (355)
T ss_dssp CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHTTSCHHHHHHHHTSCCCCC
T ss_pred ccccChhhhcCCCCCCCcccccccchHHHHhhCCCCCCCCCHHHHHHHHHHhccCCCHHHHHHhhhhHHHHhhcCccccc
Confidence 99999999998899999999999999999999998887542211111000 000000
Q ss_pred ---------ccCCC---CCchhHHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 014478 204 ---------ALEGH---FSNDEGTELVRLASRCLQSEARERPNAKSLVIS 241 (424)
Q Consensus 204 ---------~~~~~---~~~~~~~~l~~li~~cl~~dp~~Rps~~~~~~~ 241 (424)
..... .....++++.+||.+||..||++|||++|+++|
T Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~ta~elL~H 311 (355)
T d2b1pa1 262 LTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQH 311 (355)
T ss_dssp CCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred cccccccccccccccccccccCCHHHHHHHHHHCcCChhHCcCHHHHhcC
Confidence 00000 012357789999999999999999999999976
|
| >d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase p38 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.9e-43 Score=331.65 Aligned_cols=236 Identities=15% Similarity=0.175 Sum_probs=184.2
Q ss_pred CCCcccceeee--ecceecccccCCCc---hhhhHHHHHHHHHhcCCCcCcceeEEEEEeC-----CeeeEEEecCCCCC
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESSD---LGETLNLEEAKAVGNLRSERLANLIGCCYEA-----DERLLVAEFMPNET 71 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~~---~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~-----~~~~lv~e~~~~gs 71 (424)
||||.||++.+ .+..||+|++.... ...+.+.+|+++|++++|||||++++++... ...+++|+++.||+
T Consensus 29 G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~h~~iv~~~~~~~~~~~~~~~~~~~i~~~~~gg~ 108 (348)
T d2gfsa1 29 GAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGAD 108 (348)
T ss_dssp GTTSSEEEEEETTTTEEEEEEECSCTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSTTTCCCCEEEEECCSEE
T ss_pred CCCeEEEEEEECCCCCEEEEEEECchhcChHHHHHHHHHHHHHHhcCCCCeeeEEEEEeeccccccCceEEEEEeecCCc
Confidence 89999999987 57889999886543 3356788999999999999999999999643 23467778888999
Q ss_pred HHhHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCC-CccccCccC
Q 014478 72 LAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG-KSYSTNLAF 150 (424)
Q Consensus 72 L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~-~~~~gt~~y 150 (424)
|.+++. .+++++.++..++.||+.||.|||+++ |+||||||+|||++.++.+|++|||++...... ....||+.|
T Consensus 109 L~~~~~---~~~l~e~~~~~i~~qil~aL~~LH~~g-iiHrDiKp~NILi~~~~~~kl~dfg~a~~~~~~~~~~~g~~~y 184 (348)
T d2gfsa1 109 LNNIVK---CQKLTDDHVQFLIYQILRGLKYIHSAD-IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWY 184 (348)
T ss_dssp HHHHHT---TCCCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEECTTCCEEECCC----CCTGGGSSSCHHHHT
T ss_pred hhhhcc---cccccHHHHHHHHHHHHHHHHHHHhCC-CcccccCCccccccccccccccccchhcccCcccccccccccc
Confidence 999994 457999999999999999999999999 999999999999999999999999998765433 456789999
Q ss_pred CCccccccCC-CCCCcceehhHHHHHHHhhCCCCCCchhhHHHhhhhhhHh-------------------hhcccCC-C-
Q 014478 151 TPPEYMRTGR-VTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLL-------------------MDSALEG-H- 208 (424)
Q Consensus 151 ~aPE~~~~~~-~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~-------------------~~~~~~~-~- 208 (424)
+|||.+.+.. ++.++|||||||++|+|++|+.||++.............. ....... .
T Consensus 185 ~apE~~~~~~~~~~~~DiwSlGv~l~~ll~g~~pF~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (348)
T d2gfsa1 185 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKM 264 (348)
T ss_dssp SCHHHHTTCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHTTCCCHHHHHHHTTSCCCCCC
T ss_pred cCchhhcCCccCCcccchhhhhHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChHHhhhccchhhhhhhhhcccCCCc
Confidence 9999877654 6889999999999999999999987642221111110000 0000000 0
Q ss_pred ----CCchhHHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 014478 209 ----FSNDEGTELVRLASRCLQSEARERPNAKSLVIS 241 (424)
Q Consensus 209 ----~~~~~~~~l~~li~~cl~~dp~~Rps~~~~~~~ 241 (424)
....+++++.+||.+||..||++|||++|+++|
T Consensus 265 ~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~elL~H 301 (348)
T d2gfsa1 265 NFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH 301 (348)
T ss_dssp CHHHHSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred chhhhcCCCCHHHHHHHHHHCcCChhhCcCHHHHhcC
Confidence 012356789999999999999999999999865
|
| >d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Sky1p species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=8.5e-38 Score=295.80 Aligned_cols=239 Identities=15% Similarity=0.193 Sum_probs=181.9
Q ss_pred CCCcccceeee--ecceecccccCCCchhhhHHHHHHHHHhcCC-----------CcCcceeEEEEEeC--CeeeEEEec
Q 014478 2 GGRCSKFSICW--FHCHLKSSVLESSDLGETLNLEEAKAVGNLR-----------SERLANLIGCCYEA--DERLLVAEF 66 (424)
Q Consensus 2 G~~g~v~~~~~--~~~~v~~~~~~~~~~~~~~~~~E~~~l~~l~-----------h~~iv~~~~~~~~~--~~~~lv~e~ 66 (424)
||||.||++.. .+..||+|++.......+.+.+|+++++.++ |+||+++++++... ...+++|++
T Consensus 24 G~fg~Vy~~~~~~~g~~vAvKvi~~~~~~~~~~~~Ei~~l~~l~~~~~~~~~~~~~~~iv~~~~~~~~~~~~~~~~~~~~ 103 (362)
T d1q8ya_ 24 GHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNHKGPNGVHVVMVF 103 (362)
T ss_dssp CSSEEEEEEEETTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEEEEETTEEEEEEEE
T ss_pred CCCeEEEEEEECCCCCEEEEEEEeccccchHHHHHHHHHHHHhcchhhhhhhhcCcCceEEEEEEeeeccccceeeeeee
Confidence 89999999987 5788999999887766778889999998885 57899999998653 445666666
Q ss_pred CCCCC-HHhHhccCCCCCCCHHHHHHHHHHHHHHHHHHHh-CCCcccccCCCCCeeecCCCC------eEEccccccccC
Q 014478 67 MPNET-LAKHLFHWETQPMKWAMRLRVALYLAQALEYCSS-KGRALYHDLNAYRILFDKDGN------PRLSSFGLMKNS 138 (424)
Q Consensus 67 ~~~gs-L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~-~~~ivH~dikp~Nill~~~~~------~kl~Dfg~~~~~ 138 (424)
+.++. ............+++..+..++.||+.||.|||+ .+ |+||||||+|||++.++. ++++|||.+...
T Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~i~~i~~qil~al~~lh~~~~-IvHrDlKp~NIll~~~~~~~~~~~~kl~dfg~s~~~ 182 (362)
T d1q8ya_ 104 EVLGENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCG-IIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWY 182 (362)
T ss_dssp CCCCEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTC-EECSCCSGGGEEEEEEETTTTEEEEEECCCTTCEET
T ss_pred cccccccccccccccccCCcHHHHHHHHHHHHHHHHHHhhhcC-cccccCChhHeeeeccCcccccceeeEeeccccccc
Confidence 55443 3333333356688999999999999999999998 78 999999999999976654 899999998765
Q ss_pred CCC-CccccCccCCCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHHhh-----hhhhHh------------
Q 014478 139 RDG-KSYSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRS-----KNFLLL------------ 200 (424)
Q Consensus 139 ~~~-~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~-----~~~~~~------------ 200 (424)
... ....||+.|+|||++.+..++.++||||+||++++|++|+.||.......... ......
T Consensus 183 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~~g~~pF~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~ 262 (362)
T d1q8ya_ 183 DEHYTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIELLGELPSYLLRNG 262 (362)
T ss_dssp TBCCCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------CHHHHHHHHHHHHCSCCHHHHHHC
T ss_pred ccccccccccccccChhhccccCCCccccccchHHHHHHHHHCCCCCCCCccccccchhHHHHHHHHHhCCCCHHHhhcc
Confidence 533 45679999999999998899999999999999999999998876431110000 000000
Q ss_pred ------hh-------------------cccCCCCCchhHHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 014478 201 ------MD-------------------SALEGHFSNDEGTELVRLASRCLQSEARERPNAKSLVIS 241 (424)
Q Consensus 201 ------~~-------------------~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~~~~~ 241 (424)
.. .......+...++++.+||.+||..||.+|||++|+++|
T Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~Rpta~e~L~H 328 (362)
T d1q8ya_ 263 KYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGLVNH 328 (362)
T ss_dssp TTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBCHHHHHTC
T ss_pred cccccccccchhhhccccccCCchhhhcccccccCcccCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 00 001122345678899999999999999999999999865
|
| >d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: RIO1-like kinases domain: Rio2 serine protein kinase C-terminal domain species: Archaeoglobus fulgidus [TaxId: 2234]
Probab=99.85 E-value=3e-22 Score=170.56 Aligned_cols=152 Identities=13% Similarity=0.106 Sum_probs=112.3
Q ss_pred CCCcccceeee-ecceecccccCCCc-------------------hhhhHHHHHHHHHhcCCCcCcceeEEEEEeCCeee
Q 014478 2 GGRCSKFSICW-FHCHLKSSVLESSD-------------------LGETLNLEEAKAVGNLRSERLANLIGCCYEADERL 61 (424)
Q Consensus 2 G~~g~v~~~~~-~~~~v~~~~~~~~~-------------------~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 61 (424)
||||.||.+.. .+..|++|++.... .....+.+|...+.++.|++++..+++.. .+
T Consensus 11 G~~g~Vy~a~~~~g~~vAvKi~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~v~~~~~~~~----~~ 86 (191)
T d1zara2 11 GKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQGLAVPKVYAWEG----NA 86 (191)
T ss_dssp CSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTTTSSSCCEEEEET----TE
T ss_pred CcceEEEEEECCCCCEEEEEEEecccchhhhhhhhhhhccHHHHHHHHHHHHHHHHHHHHccCCCcceEEEecC----CE
Confidence 99999999986 67888888753211 11234456889999999999999887632 37
Q ss_pred EEEecCCCCCHHhHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCeeecCCCCeEEccccccccCCCC
Q 014478 62 LVAEFMPNETLAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG 141 (424)
Q Consensus 62 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~ 141 (424)
++|||++++.+.+ ++...+..++.|++.+|.|||+++ |+||||||+|||+++++ ++|+|||+++...+.
T Consensus 87 lvme~~~~~~~~~---------l~~~~~~~i~~ql~~~l~~lH~~g-iiHrDiKP~NILv~~~~-~~liDFG~a~~~~~~ 155 (191)
T d1zara2 87 VLMELIDAKELYR---------VRVENPDEVLDMILEEVAKFYHRG-IVHGDLSQYNVLVSEEG-IWIIDFPQSVEVGEE 155 (191)
T ss_dssp EEEECCCCEEGGG---------CCCSCHHHHHHHHHHHHHHHHHTT-EECSCCSTTSEEEETTE-EEECCCTTCEETTST
T ss_pred EEEEeeccccccc---------hhhHHHHHHHHHHHHHHHHHhhCC-EEEccCChhheeeeCCC-EEEEECCCcccCCCC
Confidence 9999999866543 233445689999999999999999 99999999999998655 899999998876543
Q ss_pred CccccCccCCC------ccccccCCCCCCcceehhHHH
Q 014478 142 KSYSTNLAFTP------PEYMRTGRVTPESVVYSFGTM 173 (424)
Q Consensus 142 ~~~~gt~~y~a------PE~~~~~~~~~~~Dv~slG~~ 173 (424)
... .|.. .+.+ .+.|+.++|+||..--
T Consensus 156 ~~~----~~l~rd~~~~~~~f-~r~y~~~~d~~s~~~~ 188 (191)
T d1zara2 156 GWR----EILERDVRNIITYF-SRTYRTEKDINSAIDR 188 (191)
T ss_dssp THH----HHHHHHHHHHHHHH-HHHHCCCCCHHHHHHH
T ss_pred CcH----HHHHHHHHHHHHHH-cCCCCCcccHHHHHHH
Confidence 321 1111 0111 2568889999997543
|
| >d1elwa_ a.118.8.1 (A:) Hop {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Hop species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.82 E-value=4.9e-20 Score=143.38 Aligned_cols=102 Identities=25% Similarity=0.388 Sum_probs=99.3
Q ss_pred HHHHHHHHhHHHhhCCHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhcCCCchHHHHHHHHHH
Q 014478 319 TLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAACL 398 (424)
Q Consensus 319 ~~~~~~~g~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~ 398 (424)
+..++.+|+.+++.|+|++|+..|+++|+.+|+ +..+|.++|.+|.++|++++|+..++++++++|+++.+|+++|.++
T Consensus 3 ~~~l~~~g~~~~~~g~~~eAi~~~~~al~~~p~-~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~~~ 81 (117)
T d1elwa_ 3 VNELKEKGNKALSVGNIDDALQCYSEAIKLDPH-NHVLYSNRSAAYAKKGDYQKAYEDGCKTVDLKPDWGKGYSRKAAAL 81 (117)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCc-chhhhhcccccccccccccccchhhhhHHHhccchhhHHHHHHHHH
Confidence 456889999999999999999999999999999 9999999999999999999999999999999999999999999999
Q ss_pred HhCCChHHHHHHHHHHHhchhhc
Q 014478 399 FSLGMENDARETLKDGTNLEAKK 421 (424)
Q Consensus 399 ~~~~~~~~A~~~~~~al~l~~~~ 421 (424)
..+|++++|+.+|+++++++|++
T Consensus 82 ~~~~~~~~A~~~~~~a~~~~p~~ 104 (117)
T d1elwa_ 82 EFLNRFEEAKRTYEEGLKHEANN 104 (117)
T ss_dssp HHTTCHHHHHHHHHHHHTTCTTC
T ss_pred HHccCHHHHHHHHHHHHHhCCCC
Confidence 99999999999999999999985
|
| >d2c2la1 a.118.8.1 (A:24-224) STIP1 homology and U box-containing protein 1, STUB1 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: STIP1 homology and U box-containing protein 1, STUB1 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.80 E-value=1.3e-19 Score=154.88 Aligned_cols=104 Identities=21% Similarity=0.404 Sum_probs=100.4
Q ss_pred HHHHHHHHHhHHHhhCCHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhcCCCchHHHHHHHHH
Q 014478 318 ETLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAAC 397 (424)
Q Consensus 318 ~~~~~~~~g~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~ 397 (424)
++..++++|+.+++.|+|++|++.|++||+++|. ++.+|+++|.||.++|++++|+.+|++|++++|+++.+|+++|.+
T Consensus 3 ~a~~l~~~Gn~~~~~g~~~~Ai~~~~kal~~~p~-~~~~~~~lg~~y~~~~~~~~Ai~~~~~al~l~p~~~~a~~~lg~~ 81 (201)
T d2c2la1 3 SAQELKEQGNRLFVGRKYPEAAACYGRAITRNPL-VAVYYTNRALCYLKMQQPEQALADCRRALELDGQSVKAHFFLGQC 81 (201)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSC-CHHHHHHHHHHHHHTTCHHHHHHHHHHHTTSCTTCHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-CHHHHHhHHHHHhhhhhhhhhhHHHHHHHHhCCCcHHHHHHHHHH
Confidence 4667899999999999999999999999999999 999999999999999999999999999999999999999999999
Q ss_pred HHhCCChHHHHHHHHHHHhchhhcC
Q 014478 398 LFSLGMENDARETLKDGTNLEAKKN 422 (424)
Q Consensus 398 ~~~~~~~~~A~~~~~~al~l~~~~~ 422 (424)
|..+|+|++|+.+|++|++++|...
T Consensus 82 ~~~l~~~~~A~~~~~~al~l~p~~~ 106 (201)
T d2c2la1 82 QLEMESYDEAIANLQRAYSLAKEQR 106 (201)
T ss_dssp HHHTTCHHHHHHHHHHHHHHHHHTT
T ss_pred HHHCCCHHHHHHHHHHHHHhCcccH
Confidence 9999999999999999999999743
|
| >d1a17a_ a.118.8.1 (A:) Protein phosphatase 5 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Protein phosphatase 5 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.79 E-value=7.9e-19 Score=144.44 Aligned_cols=106 Identities=25% Similarity=0.370 Sum_probs=102.1
Q ss_pred hHHHHHHHHHHHhHHHhhCCHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhcCCCchHHHHHH
Q 014478 315 QMQETLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQ 394 (424)
Q Consensus 315 ~~~~~~~~~~~g~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~ 394 (424)
....+..++.+|+.+++.|+|++|+..|+++++++|+ +..+|.++|.||..+|++++|+.+|++||+++|+++.+|+++
T Consensus 6 ~l~~a~~l~~~gn~~~~~~~y~~A~~~~~~al~~~p~-~~~~~~~lg~~~~~~~~~~~A~~~~~kal~~~p~~~~a~~~~ 84 (159)
T d1a17a_ 6 ALKRAEELKTQANDYFKAKDYENAIKFYSQAIELNPS-NAIYYGNRSLAYLRTECYGYALGDATRAIELDKKYIKGYYRR 84 (159)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCHHHHHHHhhhccccchh-hhhhhhhhHHHHHhccccchHHHHHHHHHHHcccchHHHHHH
Confidence 3466788999999999999999999999999999999 999999999999999999999999999999999999999999
Q ss_pred HHHHHhCCChHHHHHHHHHHHhchhhc
Q 014478 395 AACLFSLGMENDARETLKDGTNLEAKK 421 (424)
Q Consensus 395 g~~~~~~~~~~~A~~~~~~al~l~~~~ 421 (424)
|.++..+|++++|+.+|+++++++|.+
T Consensus 85 g~~~~~~g~~~eA~~~~~~a~~~~p~~ 111 (159)
T d1a17a_ 85 AASNMALGKFRAALRDYETVVKVKPHD 111 (159)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHSTTC
T ss_pred HHHHHHcCCHHHHHHHHHHHHHcCCCC
Confidence 999999999999999999999999874
|
| >d2fbna1 a.118.8.1 (A:22-174) Putative 70 kda peptidylprolyl isomerase PFL2275c {Plasmodium falciparum [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Putative 70 kda peptidylprolyl isomerase PFL2275c species: Plasmodium falciparum [TaxId: 5833]
Probab=99.75 E-value=8.4e-18 Score=137.13 Aligned_cols=107 Identities=19% Similarity=0.248 Sum_probs=98.5
Q ss_pred hHHHHHHHHHHHhHHHhhCCHHHHHHHHHHHhcCCCCCC---------------HHHHHHHHHHHHhcCChHHHHHHHHH
Q 014478 315 QMQETLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVS---------------PTVYARRCLSYLMNDMPQEALGDAMQ 379 (424)
Q Consensus 315 ~~~~~~~~~~~g~~~~~~g~~~~A~~~~~~ai~~~p~~~---------------~~~~~~~~~~~~~~~~~~~A~~~~~~ 379 (424)
....+..++.+|+.+|+.|+|.+|+..|++||+..+... ..++.|+|.||.++|++++|+.+|++
T Consensus 13 ~~~~a~~~~~~G~~~f~~~~y~~A~~~Y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~Nla~~~~~l~~~~~Al~~~~~ 92 (153)
T d2fbna1 13 KVQSAFDIKEEGNEFFKKNEINEAIVKYKEALDFFIHTEEWDDQILLDKKKNIEISCNLNLATCYNKNKDYPKAIDHASK 92 (153)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTTTCTTCCCHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCcchhhhhhHHHHHhhhhHHHHHHhhHHHHHHHhcccchhhhhhhc
Confidence 446677899999999999999999999999998776411 25788999999999999999999999
Q ss_pred HHhcCCCchHHHHHHHHHHHhCCChHHHHHHHHHHHhchhhc
Q 014478 380 AQVVSPDWPTALYLQAACLFSLGMENDARETLKDGTNLEAKK 421 (424)
Q Consensus 380 al~~~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~ 421 (424)
||+++|++.++|+++|.+|..+|++++|+.+|+++++++|.+
T Consensus 93 al~~~p~~~ka~~~~g~~~~~lg~~~~A~~~~~~al~l~P~n 134 (153)
T d2fbna1 93 VLKIDKNNVKALYKLGVANMYFGFLEEAKENLYKAASLNPNN 134 (153)
T ss_dssp HHHHSTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTC
T ss_pred cccccchhhhhhHHhHHHHHHcCCHHHHHHHHHHHHHhCCCC
Confidence 999999999999999999999999999999999999999975
|
| >d1p5qa1 a.118.8.1 (A:258-427) FKBP52 (FKBP4), C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: FKBP52 (FKBP4), C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.73 E-value=1.4e-17 Score=138.24 Aligned_cols=107 Identities=12% Similarity=0.104 Sum_probs=98.9
Q ss_pred hHHHHHHHHHHHhHHHhhCCHHHHHHHHHHHhcCCCCCC--------------HHHHHHHHHHHHhcCChHHHHHHHHHH
Q 014478 315 QMQETLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVS--------------PTVYARRCLSYLMNDMPQEALGDAMQA 380 (424)
Q Consensus 315 ~~~~~~~~~~~g~~~~~~g~~~~A~~~~~~ai~~~p~~~--------------~~~~~~~~~~~~~~~~~~~A~~~~~~a 380 (424)
....+..++++|+.+|+.|+|++|+..|++||+..|... ..+|.|+|.||.++|+|++|+.++++|
T Consensus 9 k~~~a~~l~~~G~~~~~~~~~~~Ai~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~y~k~~~~~~A~~~~~~a 88 (170)
T d1p5qa1 9 KLEQSTIVKERGTVYFKEGKYKQALLQYKKIVSWLEYESSFSNEEAQKAQALRLASHLNLAMCHLKLQAFSAAIESCNKA 88 (170)
T ss_dssp HHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHTTTCCCCCSHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhhhccccchHHHhhhchhHHHHHHHHHHHHHhhhhcccccchhhhh
Confidence 445677889999999999999999999999999887621 367889999999999999999999999
Q ss_pred HhcCCCchHHHHHHHHHHHhCCChHHHHHHHHHHHhchhhc
Q 014478 381 QVVSPDWPTALYLQAACLFSLGMENDARETLKDGTNLEAKK 421 (424)
Q Consensus 381 l~~~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~ 421 (424)
|+++|+++.+|+++|.+|..+|+|++|+.+|++|++++|++
T Consensus 89 l~~~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~P~n 129 (170)
T d1p5qa1 89 LELDSNNEKGLSRRGEAHLAVNDFELARADFQKVLQLYPNN 129 (170)
T ss_dssp HHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSSC
T ss_pred hhccccchhhhHHHHHHHHHhhhHHHHHHHHHHHHHhCCCC
Confidence 99999999999999999999999999999999999999975
|
| >d1kt1a1 a.118.8.1 (A:254-421) FKBP51, C-terminal domain {Monkey (Saimiri boliviensis) [TaxId: 27679]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: FKBP51, C-terminal domain species: Monkey (Saimiri boliviensis) [TaxId: 27679]
Probab=99.71 E-value=5.4e-17 Score=134.49 Aligned_cols=107 Identities=12% Similarity=0.163 Sum_probs=97.6
Q ss_pred hHHHHHHHHHHHhHHHhhCCHHHHHHHHHHHhcCCCCC--------------CHHHHHHHHHHHHhcCChHHHHHHHHHH
Q 014478 315 QMQETLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMV--------------SPTVYARRCLSYLMNDMPQEALGDAMQA 380 (424)
Q Consensus 315 ~~~~~~~~~~~g~~~~~~g~~~~A~~~~~~ai~~~p~~--------------~~~~~~~~~~~~~~~~~~~~A~~~~~~a 380 (424)
....+..++++|+.+++.|+|.+|+..|++||...|.. ...++.|+|.||.++|++++|+.+++++
T Consensus 11 ~~~~a~~~~e~G~~~~~~~~~~~A~~~Y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~Nla~~~~~l~~~~~Ai~~~~~a 90 (168)
T d1kt1a1 11 KLEQAAIVKEKGTVYFKGGKYVQAVIQYGKIVSWLEMEYGLSEKESKASESFLLAAFLNLAMCYLKLREYTKAVECCDKA 90 (168)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTCCSCCHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhccchhhhhhcchhHHHHHHhHHHHHHHhhhcccchhhhhhh
Confidence 34567889999999999999999999999999765431 1256889999999999999999999999
Q ss_pred HhcCCCchHHHHHHHHHHHhCCChHHHHHHHHHHHhchhhc
Q 014478 381 QVVSPDWPTALYLQAACLFSLGMENDARETLKDGTNLEAKK 421 (424)
Q Consensus 381 l~~~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~ 421 (424)
++++|++.++|+++|.+|..+|+|++|+.+|+++++++|++
T Consensus 91 l~l~p~~~~a~~~~~~~~~~l~~~~~A~~~~~~al~l~P~n 131 (168)
T d1kt1a1 91 LGLDSANEKGLYRRGEAQLLMNEFESAKGDFEKVLEVNPQN 131 (168)
T ss_dssp HHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHSCTTC
T ss_pred hhcccchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC
Confidence 99999999999999999999999999999999999999975
|
| >d1elra_ a.118.8.1 (A:) Hop {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Hop species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.69 E-value=4.3e-17 Score=128.57 Aligned_cols=103 Identities=17% Similarity=0.161 Sum_probs=95.7
Q ss_pred HHHHHHHHHHhHHHhhCCHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhcCCCchH-------
Q 014478 317 QETLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPT------- 389 (424)
Q Consensus 317 ~~~~~~~~~g~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~------- 389 (424)
+.+..+++.|+.+++.|+|++|+++|+++|+++|+ +..++.++|.||.++|+|++|+.++++||+++|++..
T Consensus 2 ~~a~~~k~~G~~~~~~~~y~~Ai~~y~~al~~~p~-~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~~~~~~~~~~~a~ 80 (128)
T d1elra_ 2 KQALKEKELGNDAYKKKDFDTALKHYDKAKELDPT-NMTYITNQAAVYFEKGDYNKCRELCEKAIEVGRENREDYRQIAK 80 (128)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHSTTCHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcc-cHHHHHhHHHHHHHcCchHHHHHHHHHHHHhCcccHHHHHHHHH
Confidence 45778899999999999999999999999999999 9999999999999999999999999999999998864
Q ss_pred HHHHHHHHHHhCCChHHHHHHHHHHHhchhh
Q 014478 390 ALYLQAACLFSLGMENDARETLKDGTNLEAK 420 (424)
Q Consensus 390 a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~ 420 (424)
+|+++|.++..++++++|+.+|++++..++.
T Consensus 81 ~~~~lg~~~~~~~~~~~A~~~~~kal~~~~~ 111 (128)
T d1elra_ 81 AYARIGNSYFKEEKYKDAIHFYNKSLAEHRT 111 (128)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCCC
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHhcCCC
Confidence 6777888999999999999999999987653
|
| >d1ihga1 a.118.8.1 (A:197-365) Cyclophilin 40 {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Cyclophilin 40 species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.68 E-value=1e-16 Score=132.97 Aligned_cols=105 Identities=20% Similarity=0.223 Sum_probs=96.3
Q ss_pred HHHHHHHHHHHhHHHhhCCHHHHHHHHHHHhcC----------------CCCCCHHHHHHHHHHHHhcCChHHHHHHHHH
Q 014478 316 MQETLNSKKHGDTAFRAKDFSTAIDCYTQFIDG----------------GTMVSPTVYARRCLSYLMNDMPQEALGDAMQ 379 (424)
Q Consensus 316 ~~~~~~~~~~g~~~~~~g~~~~A~~~~~~ai~~----------------~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~ 379 (424)
...+..+...|+.++..|+|++|++.|++||+. +|. ...++.|+|.||.++|++++|+.+|++
T Consensus 24 ~~~a~~~~~~~~~~~~~~~y~~Ai~~y~~al~~~~~~~~~~~~~~~~~~~~~-~~~~~~nla~~~~~~~~~~~Ai~~~~~ 102 (169)
T d1ihga1 24 LLISEDLKNIGNTFFKSQNWEMAIKKYTKVLRYVEGSRAAAEDADGAKLQPV-ALSCVLNIGACKLKMSDWQGAVDSCLE 102 (169)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHSCHHHHGGGHHH-HHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhhhhhhhhhhHHHHHhChh-hHHHHHHHHHHHHhhcccchhhhhhhh
Confidence 344566788999999999999999999999864 344 567899999999999999999999999
Q ss_pred HHhcCCCchHHHHHHHHHHHhCCChHHHHHHHHHHHhchhhc
Q 014478 380 AQVVSPDWPTALYLQAACLFSLGMENDARETLKDGTNLEAKK 421 (424)
Q Consensus 380 al~~~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~ 421 (424)
||+++|+++++|+++|.+|..+|+|++|+.+|++|++++|++
T Consensus 103 al~~~p~~~~a~~~~g~~~~~l~~~~~A~~~~~~al~l~p~n 144 (169)
T d1ihga1 103 ALEIDPSNTKALYRRAQGWQGLKEYDQALADLKKAQEIAPED 144 (169)
T ss_dssp HHTTCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC
T ss_pred hhhhhhhhhhHHHhHHHHHHHccCHHHHHHHHHHHHHhCCCC
Confidence 999999999999999999999999999999999999999975
|
| >d1hxia_ a.118.8.1 (A:) Peroxin pex5 (peroxisomal targeting signal 1 (PTS1) receptor) {Trypanosoma brucei [TaxId: 5691]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Peroxin pex5 (peroxisomal targeting signal 1 (PTS1) receptor) species: Trypanosoma brucei [TaxId: 5691]
Probab=99.66 E-value=2.7e-16 Score=120.77 Aligned_cols=95 Identities=13% Similarity=0.042 Sum_probs=91.6
Q ss_pred HHHHHHHhHHHhhCCHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhcCCCchHHHHHHHHHHH
Q 014478 320 LNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAACLF 399 (424)
Q Consensus 320 ~~~~~~g~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~ 399 (424)
......|..+++.|++++|+..|+++++.+|+ +..+|.++|.++..++++++|+..+++|++++|++..+|+.+|.+|.
T Consensus 17 ~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~-~~~a~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~la~~y~ 95 (112)
T d1hxia_ 17 ENPMEEGLSMLKLANLAEAALAFEAVCQKEPE-REEAWRSLGLTQAENEKDGLAIIALNHARMLDPKDIAVHAALAVSHT 95 (112)
T ss_dssp SCHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhhHHHHHHHhhhcccccc-cchhhhhhhhhhhhhhhHHHhhcccccccccccccccchHHHHHHHH
Confidence 34567899999999999999999999999999 99999999999999999999999999999999999999999999999
Q ss_pred hCCChHHHHHHHHHHH
Q 014478 400 SLGMENDARETLKDGT 415 (424)
Q Consensus 400 ~~~~~~~A~~~~~~al 415 (424)
.+|++++|++.|+++|
T Consensus 96 ~~g~~~~A~~~l~~~l 111 (112)
T d1hxia_ 96 NEHNANAALASLRAWL 111 (112)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HCCCHHHHHHHHHHHh
Confidence 9999999999999986
|
| >d1xnfa_ a.118.8.1 (A:) Lipoprotein NlpI {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Lipoprotein NlpI species: Escherichia coli [TaxId: 562]
Probab=99.63 E-value=1.2e-15 Score=135.15 Aligned_cols=104 Identities=12% Similarity=-0.011 Sum_probs=100.0
Q ss_pred HHHHHHHHHHhHHHhhCCHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhcCCCchHHHHHHHH
Q 014478 317 QETLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAA 396 (424)
Q Consensus 317 ~~~~~~~~~g~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~ 396 (424)
..+..+...|..+++.|++++|++.|++||+++|+ +..+|+++|.+|..+|++++|+..|+++++++|+++.+++++|.
T Consensus 35 ~~a~~~~~~G~~y~~~g~~~~A~~~~~~al~l~p~-~~~a~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~ 113 (259)
T d1xnfa_ 35 ERAQLLYERGVLYDSLGLRALARNDFSQALAIRPD-MPEVFNYLGIYLTQAGNFDAAYEAFDSVLELDPTYNYAHLNRGI 113 (259)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCC-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHCCCHHHHHHHHHHhhccCCC-CHHHHhhhchHHHHHHHHHHhhhhhhHHHHHHhhhhhhHHHHHH
Confidence 45677889999999999999999999999999999 99999999999999999999999999999999999999999999
Q ss_pred HHHhCCChHHHHHHHHHHHhchhhc
Q 014478 397 CLFSLGMENDARETLKDGTNLEAKK 421 (424)
Q Consensus 397 ~~~~~~~~~~A~~~~~~al~l~~~~ 421 (424)
++..+|++++|+..|+++++++|.+
T Consensus 114 ~~~~~g~~~~A~~~~~~al~~~p~~ 138 (259)
T d1xnfa_ 114 ALYYGGRDKLAQDDLLAFYQDDPND 138 (259)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHCTTC
T ss_pred HHHHHhhHHHHHHHHHHHHhhcccc
Confidence 9999999999999999999999864
|
| >d1hh8a_ a.118.8.1 (A:) Neutrophil cytosolic factor 2 (NCF-2, p67-phox) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Neutrophil cytosolic factor 2 (NCF-2, p67-phox) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.63 E-value=1.8e-15 Score=127.95 Aligned_cols=100 Identities=14% Similarity=0.086 Sum_probs=92.2
Q ss_pred HHHHHHHHHhHHHhhCCHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhcCCCchHHHHHHHHH
Q 014478 318 ETLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAAC 397 (424)
Q Consensus 318 ~~~~~~~~g~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~ 397 (424)
++..+..+|..++..|+|++|++.|+++ .|. ++.+|+|+|.+|..+|++++|+.+|++||+++|+++.+|+++|.+
T Consensus 4 ~~~~l~~~g~~~~~~~d~~~Al~~~~~i---~~~-~~~~~~nlG~~~~~~g~~~~A~~~~~kAl~ldp~~~~a~~~~g~~ 79 (192)
T d1hh8a_ 4 EAISLWNEGVLAADKKDWKGALDAFSAV---QDP-HSRICFNIGCMYTILKNMTEAEKAFTRSINRDKHLAVAYFQRGML 79 (192)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHTS---SSC-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHhc---CCC-CHHHHHHHHHHHHHcCCchhHHHHHHHHHHHhhhhhhhHHHHHHH
Confidence 4667778999999999999999999874 455 788999999999999999999999999999999999999999999
Q ss_pred HHhCCChHHHHHHHHHHHhchhhc
Q 014478 398 LFSLGMENDARETLKDGTNLEAKK 421 (424)
Q Consensus 398 ~~~~~~~~~A~~~~~~al~l~~~~ 421 (424)
+.++|+|++|+.+|++|++..+.+
T Consensus 80 ~~~~g~~~~A~~~~~kAl~~~~~n 103 (192)
T d1hh8a_ 80 YYQTEKYDLAIKDLKEALIQLRGN 103 (192)
T ss_dssp HHHTTCHHHHHHHHHHHHHTTTTC
T ss_pred HHhhccHHHHHHHHHHHHHhCccC
Confidence 999999999999999999876643
|
| >d2hr2a1 a.118.8.8 (A:2-157) Hypothetical protein CT2138 {Chlorobium tepidum [TaxId: 1097]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: CT2138-like domain: Hypothetical protein CT2138 species: Chlorobium tepidum [TaxId: 1097]
Probab=99.59 E-value=2.3e-15 Score=122.92 Aligned_cols=108 Identities=16% Similarity=0.123 Sum_probs=94.7
Q ss_pred hHHHHHHHHHHHhHHHhhCCHHHHHHHHHHHhcCCCCC-----------CHHHHHHHHHHHHhcCChHHHHHHHHHHHhc
Q 014478 315 QMQETLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMV-----------SPTVYARRCLSYLMNDMPQEALGDAMQAQVV 383 (424)
Q Consensus 315 ~~~~~~~~~~~g~~~~~~g~~~~A~~~~~~ai~~~p~~-----------~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~ 383 (424)
....+..++..|+.++..|+|++|++.|++||++.|+. ...+|.|+|.+|.++|++++|+.++++++.+
T Consensus 5 ~~a~a~~~l~~g~~~~~~g~y~~Ai~~y~~Al~i~~~~~~~~~~~~~~~~a~~~~nlg~~~~~lg~~~~A~~~~~~al~~ 84 (156)
T d2hr2a1 5 EVVGAYLALSDAQRQLVAGEYDEAAANCRRAMEISHTMPPEEAFDHAGFDAFCHAGLAEALAGLRSFDEALHSADKALHY 84 (156)
T ss_dssp HHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTSCTTSCCCHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhChhhhhhhhcccchhHHHHHHHHHHHHHHcCccchhhHhhhhhhhc
Confidence 34556677888999999999999999999999988762 1368999999999999999999999999987
Q ss_pred CCC-----------chHHHHHHHHHHHhCCChHHHHHHHHHHHhchhhcC
Q 014478 384 SPD-----------WPTALYLQAACLFSLGMENDARETLKDGTNLEAKKN 422 (424)
Q Consensus 384 ~p~-----------~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~~ 422 (424)
.|+ ...+++++|.+|..+|++++|+.+|++|+++.|+..
T Consensus 85 ~~~~~~~~~~~~~~~~~a~~~~g~~~~~lg~~eeA~~~~~~Al~l~~~~~ 134 (156)
T d2hr2a1 85 FNRRGELNQDEGKLWISAVYSRALALDGLGRGAEAMPEFKKVVEMIEERK 134 (156)
T ss_dssp HHHHCCTTSTHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHCC
T ss_pred ccccccccccccchhHHHHhhhHHHHHHHHHHHHHHHHHHHHHHhhHHhh
Confidence 553 455899999999999999999999999999998753
|
| >d1nzna_ a.118.8.1 (A:) Mitochondria fission protein Fis1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Mitochondria fission protein Fis1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.59 E-value=1.3e-15 Score=118.38 Aligned_cols=97 Identities=7% Similarity=-0.031 Sum_probs=88.6
Q ss_pred HHHhHHHhhCCHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHhcC---ChHHHHHHHHHHHhcCCCc--hHHHHHHHHHH
Q 014478 324 KHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMND---MPQEALGDAMQAQVVSPDW--PTALYLQAACL 398 (424)
Q Consensus 324 ~~g~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~---~~~~A~~~~~~al~~~p~~--~~a~~~~g~~~ 398 (424)
..++.+...+++++|++.|.+++.++|. +..+++|+|.|+.+.+ ++++|+..+++++..+|.+ ..+++++|.+|
T Consensus 4 ~l~n~~~~~~~l~~Ae~~Y~~aL~~~p~-~~~~~~n~a~~L~~s~~~~d~~~Ai~~l~~~l~~~~~~~~~~~~~~Lg~~y 82 (122)
T d1nzna_ 4 AVLNELVSVEDLLKFEKKFQSEKAAGSV-SKSTQFEYAWCLVRTRYNDDIRKGIVLLEELLPKGSKEEQRDYVFYLAVGN 82 (122)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHSCC-CHHHHHHHHHHHTTSSSHHHHHHHHHHHHHHTTTSCHHHHHHHHHHHHHHH
T ss_pred HHHHHhcCHHHHHHHHHHHHHHHhhCCC-CHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHhccCCchHHHHHHHHHHHH
Confidence 4567788999999999999999999999 9999999999998755 4567999999999999866 56999999999
Q ss_pred HhCCChHHHHHHHHHHHhchhhc
Q 014478 399 FSLGMENDARETLKDGTNLEAKK 421 (424)
Q Consensus 399 ~~~~~~~~A~~~~~~al~l~~~~ 421 (424)
..+|+|++|+.+|+++|+++|++
T Consensus 83 ~~~g~~~~A~~~~~~aL~~~P~~ 105 (122)
T d1nzna_ 83 YRLKEYEKALKYVRGLLQTEPQN 105 (122)
T ss_dssp HHTTCHHHHHHHHHHHHHHCTTC
T ss_pred HHHhhhHHHHHHHHHHHHhCcCC
Confidence 99999999999999999999975
|
| >d1hh8a_ a.118.8.1 (A:) Neutrophil cytosolic factor 2 (NCF-2, p67-phox) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Neutrophil cytosolic factor 2 (NCF-2, p67-phox) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.53 E-value=3.8e-14 Score=119.64 Aligned_cols=102 Identities=18% Similarity=0.099 Sum_probs=94.4
Q ss_pred HHHHHHHhHHHhhCCHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhcCCCc------------
Q 014478 320 LNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDW------------ 387 (424)
Q Consensus 320 ~~~~~~g~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~------------ 387 (424)
..+...|..++..|+|++|++.|++||+++|+ ++.+|+++|.+|.++|++++|+.+|++|+...|.+
T Consensus 37 ~~~~nlG~~~~~~g~~~~A~~~~~kAl~ldp~-~~~a~~~~g~~~~~~g~~~~A~~~~~kAl~~~~~n~~~~~~~~~~~~ 115 (192)
T d1hh8a_ 37 RICFNIGCMYTILKNMTEAEKAFTRSINRDKH-LAVAYFQRGMLYYQTEKYDLAIKDLKEALIQLRGNQLIDYKILGLQF 115 (192)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTTTCSEEECGGGTBCC
T ss_pred HHHHHHHHHHHHcCCchhHHHHHHHHHHHhhh-hhhhHHHHHHHHHhhccHHHHHHHHHHHHHhCccCchHHHHHhhhhc
Confidence 35678999999999999999999999999999 99999999999999999999999999999876643
Q ss_pred ----hHHHHHHHHHHHhCCChHHHHHHHHHHHhchhhcC
Q 014478 388 ----PTALYLQAACLFSLGMENDARETLKDGTNLEAKKN 422 (424)
Q Consensus 388 ----~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~~ 422 (424)
.++++++|.++..+|++++|++.|++|+++.|+..
T Consensus 116 ~~~~~e~~~n~a~~~~~~~~~~~A~~~l~~A~~~~~~~~ 154 (192)
T d1hh8a_ 116 KLFACEVLYNIAFMYAKKEEWKKAEEQLALATSMKSEPR 154 (192)
T ss_dssp EEEHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCCSGG
T ss_pred ccchHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCcc
Confidence 47899999999999999999999999999988743
|
| >d1zu2a1 a.118.8.1 (A:1-145) Mitochondrial import receptor subunit tom20-3 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Mitochondrial import receptor subunit tom20-3 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.52 E-value=4e-15 Score=119.66 Aligned_cols=94 Identities=14% Similarity=0.075 Sum_probs=85.3
Q ss_pred hHHHhhCCHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHhc----------CChHHHHHHHHHHHhcCCCchHHHHHHHH
Q 014478 327 DTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMN----------DMPQEALGDAMQAQVVSPDWPTALYLQAA 396 (424)
Q Consensus 327 ~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~----------~~~~~A~~~~~~al~~~p~~~~a~~~~g~ 396 (424)
..+-+.+.|++|++.|++|++++|+ ++.+++++|.++..+ +.+++|+..|++|++++|+++.+|+++|.
T Consensus 5 ~~~~r~~~fe~A~~~~e~al~~~P~-~~~~~~~~g~~l~~~~~~~~~~e~~~~~~~Ai~~~~kAl~l~P~~~~a~~~lG~ 83 (145)
T d1zu2a1 5 TEFDRILLFEQIRQDAENTYKSNPL-DADNLTRWGGVLLELSQFHSISDAKQMIQEAITKFEEALLIDPKKDEAVWCIGN 83 (145)
T ss_dssp CSHHHHHHHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred HHHHHHccHHHHHHHHHHHHhhCCc-chHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHhcchhhHHHhhHHH
Confidence 4455678899999999999999999 999999999999854 55689999999999999999999999999
Q ss_pred HHHhCCC-----------hHHHHHHHHHHHhchhhc
Q 014478 397 CLFSLGM-----------ENDARETLKDGTNLEAKK 421 (424)
Q Consensus 397 ~~~~~~~-----------~~~A~~~~~~al~l~~~~ 421 (424)
+|..+|+ |++|+++|++|++++|.+
T Consensus 84 ~y~~~g~~~~~~~~~~~~~~~A~~~~~kal~l~P~~ 119 (145)
T d1zu2a1 84 AYTSFAFLTPDETEAKHNFDLATQFFQQAVDEQPDN 119 (145)
T ss_dssp HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCTTC
T ss_pred HHHHcccchhhHHHHHHhHHHhhhhhhcccccCCCH
Confidence 9988764 799999999999999975
|
| >d1fcha_ a.118.8.1 (A:) Peroxin pex5 (peroxisomal targeting signal 1 (PTS1) receptor) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Peroxin pex5 (peroxisomal targeting signal 1 (PTS1) receptor) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.50 E-value=5.8e-14 Score=128.26 Aligned_cols=103 Identities=16% Similarity=0.209 Sum_probs=97.6
Q ss_pred HHHHHHHHhHHHhhCCHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhcCCCchHHHHHHHHHH
Q 014478 319 TLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAACL 398 (424)
Q Consensus 319 ~~~~~~~g~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~ 398 (424)
+..+...|..+...|++++|+..|++++..+|+ +..+|.++|.+|..+|++++|+..|+++++++|+++.+|+++|.+|
T Consensus 172 ~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~-~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~ 250 (323)
T d1fcha_ 172 PDVQCGLGVLFNLSGEYDKAVDCFTAALSVRPN-DYLLWNKLGATLANGNQSEEAVAAYRRALELQPGYIRSRYNLGISC 250 (323)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred cccchhhHHHHHHHHHHhhhhcccccccccccc-cccchhhhhhcccccccchhHHHHHHHHHHHhhccHHHHHHHHHHH
Confidence 345667899999999999999999999999999 9999999999999999999999999999999999999999999999
Q ss_pred HhCCChHHHHHHHHHHHhchhhcC
Q 014478 399 FSLGMENDARETLKDGTNLEAKKN 422 (424)
Q Consensus 399 ~~~~~~~~A~~~~~~al~l~~~~~ 422 (424)
..+|++++|+..|++|++++|++.
T Consensus 251 ~~~g~~~~A~~~~~~al~l~p~~~ 274 (323)
T d1fcha_ 251 INLGAHREAVEHFLEALNMQRKSR 274 (323)
T ss_dssp HHHTCHHHHHHHHHHHHHHHHTC-
T ss_pred HHCCCHHHHHHHHHHHHHhCCcCh
Confidence 999999999999999999999753
|
| >d2h6fa1 a.118.6.1 (A:55-369) Protein farnesyltransferase alpha-subunit {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: Protein prenylyltransferase family: Protein prenylyltransferase domain: Protein farnesyltransferase alpha-subunit species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.44 E-value=1.5e-13 Score=125.41 Aligned_cols=106 Identities=8% Similarity=-0.034 Sum_probs=96.7
Q ss_pred hHHHHHHHHHHHhHHHhhC-CHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhcCCCchHHHHH
Q 014478 315 QMQETLNSKKHGDTAFRAK-DFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYL 393 (424)
Q Consensus 315 ~~~~~~~~~~~g~~~~~~g-~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~ 393 (424)
.......+..+|..+...| ++++|++.|+++++.+|+ +..+|.++|.++..+|++++|+..+++|++++|++..+|++
T Consensus 73 nP~~~~a~~~r~~~l~~l~~~~~eal~~~~~al~~~p~-~~~a~~~~~~~~~~l~~~~eAl~~~~kal~~dp~n~~a~~~ 151 (315)
T d2h6fa1 73 NAANYTVWHFRRVLLKSLQKDLHEEMNYITAIIEEQPK-NYQVWHHRRVLVEWLRDPSQELEFIADILNQDAKNYHAWQH 151 (315)
T ss_dssp CTTCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHTCCTTHHHHHHHHHHHCTTCHHHHHH
T ss_pred CCCChHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHh-hhhHHHHHhHHHHhhccHHHHHHHHhhhhhhhhcchHHHHH
Confidence 3445667888899888876 599999999999999999 99999999999999999999999999999999999999999
Q ss_pred HHHHHHhCCChHHHHHHHHHHHhchhhc
Q 014478 394 QAACLFSLGMENDARETLKDGTNLEAKK 421 (424)
Q Consensus 394 ~g~~~~~~~~~~~A~~~~~~al~l~~~~ 421 (424)
+|.++..+|++++|+++|++++++||.+
T Consensus 152 ~~~~~~~~~~~~~Al~~~~~al~~~p~n 179 (315)
T d2h6fa1 152 RQWVIQEFKLWDNELQYVDQLLKEDVRN 179 (315)
T ss_dssp HHHHHHHHTCCTTHHHHHHHHHHHCTTC
T ss_pred HHHHHHHHHhhHHHHHHHHHHHHHCCcc
Confidence 9999999999999999999999999975
|
| >d2h6fa1 a.118.6.1 (A:55-369) Protein farnesyltransferase alpha-subunit {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: Protein prenylyltransferase family: Protein prenylyltransferase domain: Protein farnesyltransferase alpha-subunit species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.44 E-value=3e-13 Score=123.41 Aligned_cols=94 Identities=15% Similarity=-0.012 Sum_probs=47.8
Q ss_pred HhHHHhhCCHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHhcCC-hHHHHHHHHHHHhcCCCchHHHHHHHHHHHhCCCh
Q 014478 326 GDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDM-PQEALGDAMQAQVVSPDWPTALYLQAACLFSLGME 404 (424)
Q Consensus 326 g~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~-~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~~~~~ 404 (424)
|..+.+.+.+++|++.|++||+++|+ +..+|+++|.++..+++ +++|+.+++++++++|++..+|+++|.++..+|++
T Consensus 50 ~~~~~~~e~~~~Al~~~~~ai~lnP~-~~~a~~~r~~~l~~l~~~~~eal~~~~~al~~~p~~~~a~~~~~~~~~~l~~~ 128 (315)
T d2h6fa1 50 RAVLQRDERSERAFKLTRDAIELNAA-NYTVWHFRRVLLKSLQKDLHEEMNYITAIIEEQPKNYQVWHHRRVLVEWLRDP 128 (315)
T ss_dssp HHHHHHTCCCHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCC
T ss_pred HHHHHhCCchHHHHHHHHHHHHHCCC-ChHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHhhhhHHHHHhHHHHhhccH
Confidence 44444444555555555555555555 55555555555544432 45555555555555555555555555555555555
Q ss_pred HHHHHHHHHHHhchhh
Q 014478 405 NDARETLKDGTNLEAK 420 (424)
Q Consensus 405 ~~A~~~~~~al~l~~~ 420 (424)
++|+++|++|++++|+
T Consensus 129 ~eAl~~~~kal~~dp~ 144 (315)
T d2h6fa1 129 SQELEFIADILNQDAK 144 (315)
T ss_dssp TTHHHHHHHHHHHCTT
T ss_pred HHHHHHHhhhhhhhhc
Confidence 5555555555555544
|
| >d1fcha_ a.118.8.1 (A:) Peroxin pex5 (peroxisomal targeting signal 1 (PTS1) receptor) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Peroxin pex5 (peroxisomal targeting signal 1 (PTS1) receptor) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.43 E-value=4.6e-13 Score=122.13 Aligned_cols=100 Identities=15% Similarity=0.128 Sum_probs=96.4
Q ss_pred HHHHHHhHHHhhCCHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhcCCCchHHHHHHHHHHHh
Q 014478 321 NSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAACLFS 400 (424)
Q Consensus 321 ~~~~~g~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~ 400 (424)
..+++|..+++.|++++|++.|+++|+.+|+ +..+|.++|.+|..+|++++|+..+++|++++|++..+|+++|.+|..
T Consensus 21 ~~~~~g~~~~~~g~~~~A~~~~~~al~~~P~-~~~a~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~ 99 (323)
T d1fcha_ 21 QPFEEGLRRLQEGDLPNAVLLFEAAVQQDPK-HMEAWQYLGTTQAENEQELLAISALRRCLELKPDNQTALMALAVSFTN 99 (323)
T ss_dssp SHHHHHHHHHHTTCHHHHHHHHHHHHHSCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHcCChHHHHHHHHhhhccccccccccccccccccc
Confidence 3567899999999999999999999999999 999999999999999999999999999999999999999999999999
Q ss_pred CCChHHHHHHHHHHHhchhhc
Q 014478 401 LGMENDARETLKDGTNLEAKK 421 (424)
Q Consensus 401 ~~~~~~A~~~~~~al~l~~~~ 421 (424)
+|++++|++.|++++.++|+.
T Consensus 100 ~~~~~~A~~~~~~~~~~~~~~ 120 (323)
T d1fcha_ 100 ESLQRQACEILRDWLRYTPAY 120 (323)
T ss_dssp TTCHHHHHHHHHHHHHTSTTT
T ss_pred cccccccccchhhHHHhccch
Confidence 999999999999999999864
|
| >d1tjca_ a.118.8.1 (A:) Prolyl 4-hydroxylase alpha-1 subunit, P4HA1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Prolyl 4-hydroxylase alpha-1 subunit, P4HA1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.40 E-value=3e-13 Score=99.98 Aligned_cols=84 Identities=12% Similarity=-0.013 Sum_probs=75.4
Q ss_pred HHHHHHHHHhHHHhhCCHHHHHHHHHHHhcCCCCC------CHHHHHHHHHHHHhcCChHHHHHHHHHHHhcCCCchHHH
Q 014478 318 ETLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMV------SPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTAL 391 (424)
Q Consensus 318 ~~~~~~~~g~~~~~~g~~~~A~~~~~~ai~~~p~~------~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~ 391 (424)
.++..++.|..+++.|+|++|++.|++|+++.|.. ...++.++|.+|.++|++++|+..|++||+++|++..++
T Consensus 4 saddc~~lG~~~~~~g~y~~A~~~~~~Al~~~~~~~~~~~~~~~~l~~Lg~~~~~~g~~~~A~~~y~~aL~l~P~~~~a~ 83 (95)
T d1tjca_ 4 TAEDSFELGKVAYTEADYYHTELWMEQALRQLDEGEISTIDKVSVLDYLSYAVYQQGDLDKALLLTKKLLELDPEHQRAN 83 (95)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCCCSSCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHH
T ss_pred cHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHhhhhccCccHHHHHHHHhhHHHhcCChHHHHHHHHHHHHhCcCCHHHH
Confidence 35678899999999999999999999999886541 357899999999999999999999999999999999999
Q ss_pred HHHHHHHHhC
Q 014478 392 YLQAACLFSL 401 (424)
Q Consensus 392 ~~~g~~~~~~ 401 (424)
++++.....+
T Consensus 84 ~Nl~~~~~~l 93 (95)
T d1tjca_ 84 GNLKYFEYIM 93 (95)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHh
Confidence 9998876654
|
| >d1w3ba_ a.118.8.1 (A:) O-GlcNAc transferase p110 subunit, OGT {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: O-GlcNAc transferase p110 subunit, OGT species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.38 E-value=5.3e-13 Score=123.70 Aligned_cols=98 Identities=13% Similarity=0.008 Sum_probs=94.2
Q ss_pred HHHHhHHHhhCCHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhcCCCchHHHHHHHHHHHhCC
Q 014478 323 KKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAACLFSLG 402 (424)
Q Consensus 323 ~~~g~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~~~ 402 (424)
++.|+.+++.|+|++|++.|+++++.+|+ +..++..+|.+|..+|++++|+..++++++++|+++.+|+++|.+|..+|
T Consensus 3 l~la~~~~~~G~~~~A~~~~~~~l~~~p~-~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~l~~~~~~~g 81 (388)
T d1w3ba_ 3 MELAHREYQAGDFEAAERHCMQLWRQEPD-NTGVLLLLSSIHFQCRRLDRSAHFSTLAIKQNPLLAEAYSNLGNVYKERG 81 (388)
T ss_dssp CTHHHHHHHHTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHhhhhc
Confidence 46789999999999999999999999999 99999999999999999999999999999999999999999999999999
Q ss_pred ChHHHHHHHHHHHhchhhc
Q 014478 403 MENDARETLKDGTNLEAKK 421 (424)
Q Consensus 403 ~~~~A~~~~~~al~l~~~~ 421 (424)
++++|+..+..+++.++..
T Consensus 82 ~~~~A~~~~~~~~~~~~~~ 100 (388)
T d1w3ba_ 82 QLQEAIEHYRHALRLKPDF 100 (388)
T ss_dssp CHHHHHHHHHHHHHHCTTC
T ss_pred ccccccccccccccccccc
Confidence 9999999999999988753
|
| >d1w3ba_ a.118.8.1 (A:) O-GlcNAc transferase p110 subunit, OGT {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: O-GlcNAc transferase p110 subunit, OGT species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.35 E-value=2.7e-12 Score=118.76 Aligned_cols=102 Identities=15% Similarity=0.045 Sum_probs=96.6
Q ss_pred HHHHHHHHhHHHhhCCHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhcCCCchHHHHHHHHHH
Q 014478 319 TLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAACL 398 (424)
Q Consensus 319 ~~~~~~~g~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~ 398 (424)
...+...|..+...|++++|++.|.+++...|. ....+..++.++..+|++++|+..|+++++++|+++.+++++|.+|
T Consensus 271 ~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~ 349 (388)
T d1w3ba_ 271 PDAYCNLANALKEKGSVAEAEDCYNTALRLCPT-HADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVL 349 (388)
T ss_dssp HHHHHHHHHHHHHHSCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHTTTCHHHHHHHHHHHTTSCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHhhhccCCc-cchhhhHHHHHHHHCCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Confidence 445667899999999999999999999999999 9999999999999999999999999999999999999999999999
Q ss_pred HhCCChHHHHHHHHHHHhchhhc
Q 014478 399 FSLGMENDARETLKDGTNLEAKK 421 (424)
Q Consensus 399 ~~~~~~~~A~~~~~~al~l~~~~ 421 (424)
..+|++++|+..|++|++++|+.
T Consensus 350 ~~~g~~~~A~~~~~~al~l~P~~ 372 (388)
T d1w3ba_ 350 QQQGKLQEALMHYKEAIRISPTF 372 (388)
T ss_dssp HTTTCCHHHHHHHHHHHTTCTTC
T ss_pred HHcCCHHHHHHHHHHHHHhCCCC
Confidence 99999999999999999999974
|
| >d2ff4a2 a.118.8.3 (A:105-283) Probable regulatory protein EmbR, middle domain {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: BTAD-like domain: Probable regulatory protein EmbR, middle domain species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=99.27 E-value=3.5e-11 Score=99.53 Aligned_cols=101 Identities=9% Similarity=-0.000 Sum_probs=91.4
Q ss_pred HHHHHHHHHHHhHHHhhCCHHHHHHHHHHHhcCCCCCC---------------------HHHHHHHHHHHHhcCChHHHH
Q 014478 316 MQETLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVS---------------------PTVYARRCLSYLMNDMPQEAL 374 (424)
Q Consensus 316 ~~~~~~~~~~g~~~~~~g~~~~A~~~~~~ai~~~p~~~---------------------~~~~~~~~~~~~~~~~~~~A~ 374 (424)
......+...|..+...|++++|++.|.+|+.+.+++. ..++.+++.++.++|++++|+
T Consensus 8 ~~~f~~~~~~g~~~~~~g~~e~A~~~~~~AL~l~rG~~l~~~~~~~w~~~~r~~l~~~~~~a~~~la~~~~~~g~~~~Al 87 (179)
T d2ff4a2 8 LGRFVAEKTAGVHAAAAGRFEQASRHLSAALREWRGPVLDDLRDFQFVEPFATALVEDKVLAHTAKAEAEIACGRASAVI 87 (179)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCCSSTTGGGTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHhhCcccccccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCchHHH
Confidence 34556778899999999999999999999999987621 157889999999999999999
Q ss_pred HHHHHHHhcCCCchHHHHHHHHHHHhCCChHHHHHHHHHHHh
Q 014478 375 GDAMQAQVVSPDWPTALYLQAACLFSLGMENDARETLKDGTN 416 (424)
Q Consensus 375 ~~~~~al~~~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~ 416 (424)
..++++++++|.+..+|.+++.+|..+|++++|+..|+++.+
T Consensus 88 ~~~~~al~~~P~~e~~~~~l~~al~~~Gr~~eAl~~y~~~~~ 129 (179)
T d2ff4a2 88 AELEALTFEHPYREPLWTQLITAYYLSDRQSDALGAYRRVKT 129 (179)
T ss_dssp HHHHHHHHHSTTCHHHHHHHHHHHHTTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCccHHHHHHHHHHHHHhcCHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999833
|
| >d1xnfa_ a.118.8.1 (A:) Lipoprotein NlpI {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Lipoprotein NlpI species: Escherichia coli [TaxId: 562]
Probab=99.23 E-value=8.2e-12 Score=109.77 Aligned_cols=91 Identities=16% Similarity=0.152 Sum_probs=81.7
Q ss_pred hhCCHHHHHHHHHHHhcCCCC---CCHHHHHHHHHHHHhcCChHHHHHHHHHHHhcCCCchHHHHHHHHHHHhCCChHHH
Q 014478 331 RAKDFSTAIDCYTQFIDGGTM---VSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAACLFSLGMENDA 407 (424)
Q Consensus 331 ~~g~~~~A~~~~~~ai~~~p~---~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~~~~~~~A 407 (424)
...+++.|+..+++++...+. ....+++++|.+|..+|++++|+..|++||+++|+++.+|+++|.++..+|++++|
T Consensus 11 ~~~~~e~al~~~~e~l~~~~~~~~~~a~~~~~~G~~y~~~g~~~~A~~~~~~al~l~p~~~~a~~~lg~~~~~~g~~~~A 90 (259)
T d1xnfa_ 11 PTLQQEVILARMEQILASRALTDDERAQLLYERGVLYDSLGLRALARNDFSQALAIRPDMPEVFNYLGIYLTQAGNFDAA 90 (259)
T ss_dssp CCHHHHHHHHHHHHHHTSSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHTTCHHHH
T ss_pred ccHHHHHHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHhhccCCCCHHHHhhhchHHHHHHHHHHh
Confidence 344677888999999875432 25679999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhchhhc
Q 014478 408 RETLKDGTNLEAKK 421 (424)
Q Consensus 408 ~~~~~~al~l~~~~ 421 (424)
+.+|+++++++|+.
T Consensus 91 ~~~~~~al~~~p~~ 104 (259)
T d1xnfa_ 91 YEAFDSVLELDPTY 104 (259)
T ss_dssp HHHHHHHHHHCTTC
T ss_pred hhhhhHHHHHHhhh
Confidence 99999999999974
|
| >d1ihga1 a.118.8.1 (A:197-365) Cyclophilin 40 {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Cyclophilin 40 species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.21 E-value=4e-11 Score=98.45 Aligned_cols=90 Identities=14% Similarity=0.123 Sum_probs=83.1
Q ss_pred HHHHHHHHHhHHHhhCCHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhcCCCchHHHHHHHHH
Q 014478 318 ETLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAAC 397 (424)
Q Consensus 318 ~~~~~~~~g~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~ 397 (424)
.+..+...|..+++.|+|++|+..|++||+++|+ +..+|+++|.+|..+|++++|+.+|++|++++|++..++..++.+
T Consensus 76 ~~~~~~nla~~~~~~~~~~~Ai~~~~~al~~~p~-~~~a~~~~g~~~~~l~~~~~A~~~~~~al~l~p~n~~~~~~l~~~ 154 (169)
T d1ihga1 76 ALSCVLNIGACKLKMSDWQGAVDSCLEALEIDPS-NTKALYRRAQGWQGLKEYDQALADLKKAQEIAPEDKAIQAELLKV 154 (169)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHhhcccchhhhhhhhhhhhhhh-hhhHHHhHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Confidence 3445667899999999999999999999999999 999999999999999999999999999999999999999999999
Q ss_pred HHhCCChHHHH
Q 014478 398 LFSLGMENDAR 408 (424)
Q Consensus 398 ~~~~~~~~~A~ 408 (424)
+..++.+.++.
T Consensus 155 ~~~l~~~~~~~ 165 (169)
T d1ihga1 155 KQKIKAQKDKE 165 (169)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 98887777654
|
| >d1elwa_ a.118.8.1 (A:) Hop {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Hop species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.21 E-value=4.2e-11 Score=91.87 Aligned_cols=82 Identities=10% Similarity=-0.039 Sum_probs=76.8
Q ss_pred HHHHHHHHHHhHHHhhCCHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhcCCCchHHHHHHHH
Q 014478 317 QETLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAA 396 (424)
Q Consensus 317 ~~~~~~~~~g~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~ 396 (424)
..+..+...|..++..|++++|++.|.++++++|+ +..+|+++|.+|..+|++++|+..|+++++++|+++.++..++.
T Consensus 35 ~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~-~~~~~~~~g~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~~~l~~ 113 (117)
T d1elwa_ 35 HNHVLYSNRSAAYAKKGDYQKAYEDGCKTVDLKPD-WGKGYSRKAAALEFLNRFEEAKRTYEEGLKHEANNPQLKEGLQN 113 (117)
T ss_dssp TCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTTCHHHHHHHHH
T ss_pred cchhhhhcccccccccccccccchhhhhHHHhccc-hhhHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHH
Confidence 34557788999999999999999999999999999 99999999999999999999999999999999999999999988
Q ss_pred HHH
Q 014478 397 CLF 399 (424)
Q Consensus 397 ~~~ 399 (424)
+..
T Consensus 114 l~~ 116 (117)
T d1elwa_ 114 MEA 116 (117)
T ss_dssp HHH
T ss_pred HhC
Confidence 753
|
| >d1p5qa1 a.118.8.1 (A:258-427) FKBP52 (FKBP4), C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: FKBP52 (FKBP4), C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.18 E-value=6.8e-11 Score=97.15 Aligned_cols=99 Identities=15% Similarity=0.100 Sum_probs=86.6
Q ss_pred HHHHHHhHHHhhCCHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhcCCCchHHHHHHHHHHHh
Q 014478 321 NSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAACLFS 400 (424)
Q Consensus 321 ~~~~~g~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~ 400 (424)
.+...|..+++.|+|++|+..++++|+++|+ +..+++++|.||..+|++++|+.+|++|++++|++..+...++.++..
T Consensus 64 ~~~nla~~y~k~~~~~~A~~~~~~al~~~p~-~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~P~n~~~~~~l~~~~~~ 142 (170)
T d1p5qa1 64 SHLNLAMCHLKLQAFSAAIESCNKALELDSN-NEKGLSRRGEAHLAVNDFELARADFQKVLQLYPNNKAAKTQLAVCQQR 142 (170)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhhhcccccchhhhhhhcccc-chhhhHHHHHHHHHhhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Confidence 3456889999999999999999999999999 999999999999999999999999999999999999999999999988
Q ss_pred CCChHHHHHH-----HHHHHhchhh
Q 014478 401 LGMENDARET-----LKDGTNLEAK 420 (424)
Q Consensus 401 ~~~~~~A~~~-----~~~al~l~~~ 420 (424)
++++.+.... |.+..+.+++
T Consensus 143 ~~~~~~~e~~~~~~~f~~~~~~~~~ 167 (170)
T d1p5qa1 143 IRRQLAREKKLYANMFERLAEEENK 167 (170)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhcchhh
Confidence 8877765433 5555444443
|
| >d1kt1a1 a.118.8.1 (A:254-421) FKBP51, C-terminal domain {Monkey (Saimiri boliviensis) [TaxId: 27679]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: FKBP51, C-terminal domain species: Monkey (Saimiri boliviensis) [TaxId: 27679]
Probab=99.15 E-value=1.1e-10 Score=95.67 Aligned_cols=96 Identities=16% Similarity=0.156 Sum_probs=84.7
Q ss_pred HHHHHHHhHHHhhCCHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhcCCCchHHHHHHHHHHH
Q 014478 320 LNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAACLF 399 (424)
Q Consensus 320 ~~~~~~g~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~ 399 (424)
..+...|..+++.|+|++|+..++++++++|. +..+++++|.+|..+|++++|+.+|+++++++|++..++..++.+..
T Consensus 65 ~~~~Nla~~~~~l~~~~~Ai~~~~~al~l~p~-~~~a~~~~~~~~~~l~~~~~A~~~~~~al~l~P~n~~~~~~l~~~~~ 143 (168)
T d1kt1a1 65 AAFLNLAMCYLKLREYTKAVECCDKALGLDSA-NEKGLYRRGEAQLLMNEFESAKGDFEKVLEVNPQNKAARLQIFMCQK 143 (168)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHSCTTCHHHHHHHHHHHH
T ss_pred HHHHhHHHHHHHhhhcccchhhhhhhhhcccc-hHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Confidence 34557899999999999999999999999999 99999999999999999999999999999999999999999999998
Q ss_pred hCCChHH-HHHHHHHHHh
Q 014478 400 SLGMEND-ARETLKDGTN 416 (424)
Q Consensus 400 ~~~~~~~-A~~~~~~al~ 416 (424)
.++++.+ ..+.|.+.++
T Consensus 144 ~~~~~~e~~kk~~~~~f~ 161 (168)
T d1kt1a1 144 KAKEHNERDRRTYANMFK 161 (168)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHhHHHHHHHHHHHHHh
Confidence 8877755 4444444443
|
| >d1a17a_ a.118.8.1 (A:) Protein phosphatase 5 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Protein phosphatase 5 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.10 E-value=2.3e-10 Score=92.73 Aligned_cols=96 Identities=17% Similarity=0.051 Sum_probs=84.6
Q ss_pred HHHHHHHHHHhHHHhhCCHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhcCCCchHHHHHHHH
Q 014478 317 QETLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAA 396 (424)
Q Consensus 317 ~~~~~~~~~g~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~ 396 (424)
..+..+...|..++..|++++|++.|.++|+++|+ +..+|.++|.+|..+|++++|+.++++++.++|++..++..++.
T Consensus 42 ~~~~~~~~lg~~~~~~~~~~~A~~~~~kal~~~p~-~~~a~~~~g~~~~~~g~~~eA~~~~~~a~~~~p~~~~~~~~l~~ 120 (159)
T d1a17a_ 42 SNAIYYGNRSLAYLRTECYGYALGDATRAIELDKK-YIKGYYRRAASNMALGKFRAALRDYETVVKVKPHDKDAKMKYQE 120 (159)
T ss_dssp TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHH
T ss_pred hhhhhhhhhHHHHHhccccchHHHHHHHHHHHccc-chHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHHHHHH
Confidence 35567788999999999999999999999999999 99999999999999999999999999999999999999988877
Q ss_pred HH--HhCCChHHHHHHHHH
Q 014478 397 CL--FSLGMENDARETLKD 413 (424)
Q Consensus 397 ~~--~~~~~~~~A~~~~~~ 413 (424)
+. ...+.+++|+.....
T Consensus 121 ~~~~~~~~~~~~a~~~~~~ 139 (159)
T d1a17a_ 121 CNKIVKQKAFERAIAGDEH 139 (159)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCcHH
Confidence 65 445567777665443
|
| >d2fbna1 a.118.8.1 (A:22-174) Putative 70 kda peptidylprolyl isomerase PFL2275c {Plasmodium falciparum [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Putative 70 kda peptidylprolyl isomerase PFL2275c species: Plasmodium falciparum [TaxId: 5833]
Probab=99.10 E-value=1.1e-10 Score=94.13 Aligned_cols=82 Identities=13% Similarity=0.111 Sum_probs=76.4
Q ss_pred HHHHHHhHHHhhCCHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhcCCCchHHHHHHHHHHHh
Q 014478 321 NSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAACLFS 400 (424)
Q Consensus 321 ~~~~~g~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~ 400 (424)
.+...|..+++.|+|++|++.|++||+++|. +..+|+++|.+|..+|++++|+.+|+++++++|++..+...++.+..+
T Consensus 69 ~~~Nla~~~~~l~~~~~Al~~~~~al~~~p~-~~ka~~~~g~~~~~lg~~~~A~~~~~~al~l~P~n~~~~~~l~~~~~k 147 (153)
T d2fbna1 69 CNLNLATCYNKNKDYPKAIDHASKVLKIDKN-NVKALYKLGVANMYFGFLEEAKENLYKAASLNPNNLDIRNSYELCVNK 147 (153)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHH
T ss_pred HHhhHHHHHHHhcccchhhhhhhccccccch-hhhhhHHhHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Confidence 4557899999999999999999999999999 999999999999999999999999999999999999999999988766
Q ss_pred CCC
Q 014478 401 LGM 403 (424)
Q Consensus 401 ~~~ 403 (424)
+++
T Consensus 148 l~~ 150 (153)
T d2fbna1 148 LKE 150 (153)
T ss_dssp HHH
T ss_pred HHH
Confidence 543
|
| >d1elra_ a.118.8.1 (A:) Hop {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Hop species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.09 E-value=1.4e-10 Score=90.33 Aligned_cols=69 Identities=19% Similarity=0.073 Sum_probs=65.3
Q ss_pred HHHHHHHHHHHHhcCChHHHHHHHHHHHhcCCCchHHHHHHHHHHHhCCChHHHHHHHHHHHhchhhcC
Q 014478 354 PTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAACLFSLGMENDARETLKDGTNLEAKKN 422 (424)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~~ 422 (424)
+..+.++|.+++..|+|++|+..|++||+++|+++.+++++|.+|..+|+|++|+.+|++|++++|+..
T Consensus 4 a~~~k~~G~~~~~~~~y~~Ai~~y~~al~~~p~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~~~~~ 72 (128)
T d1elra_ 4 ALKEKELGNDAYKKKDFDTALKHYDKAKELDPTNMTYITNQAAVYFEKGDYNKCRELCEKAIEVGRENR 72 (128)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHST
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcccHHHHHhHHHHHHHcCchHHHHHHHHHHHHhCcccH
Confidence 456778999999999999999999999999999999999999999999999999999999999999754
|
| >d1hxia_ a.118.8.1 (A:) Peroxin pex5 (peroxisomal targeting signal 1 (PTS1) receptor) {Trypanosoma brucei [TaxId: 5691]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Peroxin pex5 (peroxisomal targeting signal 1 (PTS1) receptor) species: Trypanosoma brucei [TaxId: 5691]
Probab=99.06 E-value=2.3e-10 Score=86.84 Aligned_cols=67 Identities=16% Similarity=-0.053 Sum_probs=63.9
Q ss_pred HHHHHHHHHHHhcCChHHHHHHHHHHHhcCCCchHHHHHHHHHHHhCCChHHHHHHHHHHHhchhhc
Q 014478 355 TVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAACLFSLGMENDARETLKDGTNLEAKK 421 (424)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~ 421 (424)
..++++|.++.+.|++++|+..+++++.++|+++.+|+++|.++..+|++++|+.+|++|++++|..
T Consensus 17 ~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~ 83 (112)
T d1hxia_ 17 ENPMEEGLSMLKLANLAEAALAFEAVCQKEPEREEAWRSLGLTQAENEKDGLAIIALNHARMLDPKD 83 (112)
T ss_dssp SCHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC
T ss_pred HHHHHHHHHHHHHhhhHHHHHHHhhhcccccccchhhhhhhhhhhhhhhHHHhhccccccccccccc
Confidence 3467899999999999999999999999999999999999999999999999999999999999974
|
| >d2c2la1 a.118.8.1 (A:24-224) STIP1 homology and U box-containing protein 1, STUB1 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: STIP1 homology and U box-containing protein 1, STUB1 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.05 E-value=2.7e-10 Score=95.76 Aligned_cols=69 Identities=13% Similarity=0.079 Sum_probs=65.8
Q ss_pred CHHHHHHHHHHHHhcCChHHHHHHHHHHHhcCCCchHHHHHHHHHHHhCCChHHHHHHHHHHHhchhhc
Q 014478 353 SPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAACLFSLGMENDARETLKDGTNLEAKK 421 (424)
Q Consensus 353 ~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~ 421 (424)
....+...|..|++.|+|++|+..|++||+++|+++.+|+++|.+|..+|+|++|+.+|++|++++|+.
T Consensus 3 ~a~~l~~~Gn~~~~~g~~~~Ai~~~~kal~~~p~~~~~~~~lg~~y~~~~~~~~Ai~~~~~al~l~p~~ 71 (201)
T d2c2la1 3 SAQELKEQGNRLFVGRKYPEAAACYGRAITRNPLVAVYYTNRALCYLKMQQPEQALADCRRALELDGQS 71 (201)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHTTSCTTC
T ss_pred hHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHhHHHHHhhhhhhhhhhHHHHHHHHhCCCc
Confidence 466678999999999999999999999999999999999999999999999999999999999999974
|
| >d1tjca_ a.118.8.1 (A:) Prolyl 4-hydroxylase alpha-1 subunit, P4HA1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Prolyl 4-hydroxylase alpha-1 subunit, P4HA1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.05 E-value=2.5e-10 Score=83.83 Aligned_cols=68 Identities=10% Similarity=-0.152 Sum_probs=62.3
Q ss_pred HHHHHHHHHHHHhcCChHHHHHHHHHHHhcCCCc-------hHHHHHHHHHHHhCCChHHHHHHHHHHHhchhhc
Q 014478 354 PTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDW-------PTALYLQAACLFSLGMENDARETLKDGTNLEAKK 421 (424)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~-------~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~ 421 (424)
++-.+++|.++.+.|+|++|+..|++|+++.|.+ +++++++|.++.++|++++|+++|++||+++|+.
T Consensus 5 addc~~lG~~~~~~g~y~~A~~~~~~Al~~~~~~~~~~~~~~~~l~~Lg~~~~~~g~~~~A~~~y~~aL~l~P~~ 79 (95)
T d1tjca_ 5 AEDSFELGKVAYTEADYYHTELWMEQALRQLDEGEISTIDKVSVLDYLSYAVYQQGDLDKALLLTKKLLELDPEH 79 (95)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCCCSSCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHhhhhccCccHHHHHHHHhhHHHhcCChHHHHHHHHHHHHhCcCC
Confidence 4557899999999999999999999999886654 6789999999999999999999999999999975
|
| >d1zu2a1 a.118.8.1 (A:1-145) Mitochondrial import receptor subunit tom20-3 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Mitochondrial import receptor subunit tom20-3 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=98.91 E-value=6.3e-10 Score=88.56 Aligned_cols=90 Identities=13% Similarity=-0.037 Sum_probs=74.6
Q ss_pred HHHHHHHHHHhHHHh----------hCCHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHhcCC-----------hHHHHH
Q 014478 317 QETLNSKKHGDTAFR----------AKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDM-----------PQEALG 375 (424)
Q Consensus 317 ~~~~~~~~~g~~~~~----------~g~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~-----------~~~A~~ 375 (424)
..+..+...|..++. .+.+++|++.|++||+++|+ +..+|+++|.+|..+|+ |++|++
T Consensus 29 ~~~~~~~~~g~~l~~~~~~~~~~e~~~~~~~Ai~~~~kAl~l~P~-~~~a~~~lG~~y~~~g~~~~~~~~~~~~~~~A~~ 107 (145)
T d1zu2a1 29 LDADNLTRWGGVLLELSQFHSISDAKQMIQEAITKFEEALLIDPK-KDEAVWCIGNAYTSFAFLTPDETEAKHNFDLATQ 107 (145)
T ss_dssp TCHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
T ss_pred cchHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHhcch-hhHHHhhHHHHHHHcccchhhHHHHHHhHHHhhh
Confidence 344556666766653 45678999999999999999 99999999999988754 799999
Q ss_pred HHHHHHhcCCCchHHHHHHHHHHHhCCChHHH
Q 014478 376 DAMQAQVVSPDWPTALYLQAACLFSLGMENDA 407 (424)
Q Consensus 376 ~~~~al~~~p~~~~a~~~~g~~~~~~~~~~~A 407 (424)
.|++|++++|++..++..++.+....+.+.++
T Consensus 108 ~~~kal~l~P~~~~~~~~L~~~~ka~~~~~e~ 139 (145)
T d1zu2a1 108 FFQQAVDEQPDNTHYLKSLEMTAKAPQLHAEA 139 (145)
T ss_dssp HHHHHHHHCTTCHHHHHHHHHHHTHHHHHHHH
T ss_pred hhhcccccCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999987665555554
|
| >d1nzna_ a.118.8.1 (A:) Mitochondria fission protein Fis1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Mitochondria fission protein Fis1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.91 E-value=1e-09 Score=84.28 Aligned_cols=83 Identities=11% Similarity=-0.031 Sum_probs=70.8
Q ss_pred HHHHHHHHhHHHhh---CCHHHHHHHHHHHhcCCCCCC-HHHHHHHHHHHHhcCChHHHHHHHHHHHhcCCCchHHHHHH
Q 014478 319 TLNSKKHGDTAFRA---KDFSTAIDCYTQFIDGGTMVS-PTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQ 394 (424)
Q Consensus 319 ~~~~~~~g~~~~~~---g~~~~A~~~~~~ai~~~p~~~-~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~ 394 (424)
.......|..+++. +++++|++.|+++++.+|.+. ..+++++|.+|.++|++++|+..|+++|+++|++.+|...+
T Consensus 33 ~~~~~n~a~~L~~s~~~~d~~~Ai~~l~~~l~~~~~~~~~~~~~~Lg~~y~~~g~~~~A~~~~~~aL~~~P~~~~A~~l~ 112 (122)
T d1nzna_ 33 KSTQFEYAWCLVRTRYNDDIRKGIVLLEELLPKGSKEEQRDYVFYLAVGNYRLKEYEKALKYVRGLLQTEPQNNQAKELE 112 (122)
T ss_dssp HHHHHHHHHHHTTSSSHHHHHHHHHHHHHHTTTSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHH
T ss_pred HHHHHHHHHHHHHhcchHHHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhCcCCHHHHHHH
Confidence 45666788888764 466789999999999998622 45899999999999999999999999999999999999999
Q ss_pred HHHHHhC
Q 014478 395 AACLFSL 401 (424)
Q Consensus 395 g~~~~~~ 401 (424)
+.+..++
T Consensus 113 ~~I~~~~ 119 (122)
T d1nzna_ 113 RLIDKAM 119 (122)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 8876554
|
| >d1zbpa1 e.61.1.1 (A:2-265) Hypothetical protein VPA1032 {Vibrio parahaemolyticus [TaxId: 670]} | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: ImpE-like superfamily: ImpE-like family: ImpE-like domain: Hypothetical protein VPA1032 species: Vibrio parahaemolyticus [TaxId: 670]
Probab=98.85 E-value=4.4e-09 Score=92.19 Aligned_cols=95 Identities=9% Similarity=0.015 Sum_probs=79.7
Q ss_pred HHhHHHhhCCHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhcCCCchHHHHHHHH--------
Q 014478 325 HGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAA-------- 396 (424)
Q Consensus 325 ~g~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~-------- 396 (424)
++..+++.|++++|++.|+++|+.+|+ +..++.+++.+|...|++++|+..++++++++|++..++..++.
T Consensus 2 q~~~aL~~G~l~eAl~~l~~al~~~P~-d~~ar~~La~lL~~~G~~e~A~~~l~~a~~l~P~~~~~~~~l~~ll~a~~~~ 80 (264)
T d1zbpa1 2 QWKNALSEGQLQQALELLIEAIKASPK-DASLRSSFIELLCIDGDFERADEQLMQSIKLFPEYLPGASQLRHLVKAAQAR 80 (264)
T ss_dssp CHHHHTTTTCHHHHHHHHHHHHHTCTT-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHCCCHHHHHHHHHHHHHHCCC-CHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHhcccc
Confidence 356788999999999999999999999 99999999999999999999999999999998886655554444
Q ss_pred ---------------------------HHHhCCChHHHHHHHHHHHhchhh
Q 014478 397 ---------------------------CLFSLGMENDARETLKDGTNLEAK 420 (424)
Q Consensus 397 ---------------------------~~~~~~~~~~A~~~~~~al~l~~~ 420 (424)
++...|++++|.+.++++.++.|.
T Consensus 81 ~~a~~~~~~~~~~~~p~~~~~~l~~a~~~~~~gd~~~A~~~~~~a~e~~p~ 131 (264)
T d1zbpa1 81 KDFAQGAATAKVLGENEELTKSLVSFNLSMVSQDYEQVSELALQIEELRQE 131 (264)
T ss_dssp HHHTTSCCCEECCCSCHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCCC
T ss_pred HHHHHHhhhhhcccCchHHHHHHHHHHHHHhCCCHHHHHHHHHHHHhcCCC
Confidence 444456777777777777777765
|
| >d1qqea_ a.118.8.1 (A:) Vesicular transport protein sec17 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Vesicular transport protein sec17 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=98.83 E-value=4.1e-09 Score=94.13 Aligned_cols=105 Identities=10% Similarity=-0.016 Sum_probs=89.9
Q ss_pred HHHHHHHHHHhHHHhhCCHHHHHHHHHHHhcCCC-----CCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhcCCCc----
Q 014478 317 QETLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGT-----MVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDW---- 387 (424)
Q Consensus 317 ~~~~~~~~~g~~~~~~g~~~~A~~~~~~ai~~~p-----~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~---- 387 (424)
..+..+.+.|+.+...|+|++|++.|.+|+++.. ......|.++|.||.++|++++|++.|++++++.++.
T Consensus 35 ~Aa~~y~~aa~~y~~~~~~~~A~~~y~kA~~~~~~~~~~~~~a~~~~~~g~~y~~~~~~~~A~~~~~~a~~~~~~~~~~~ 114 (290)
T d1qqea_ 35 EAADLCVQAATIYRLRKELNLAGDSFLKAADYQKKAGNEDEAGNTYVEAYKCFKSGGNSVNAVDSLENAIQIFTHRGQFR 114 (290)
T ss_dssp HHHHHHHHHHHHHHHTTCTHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHH
T ss_pred HHHHHHHHHHHHHHHCcCHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHhCCcHHHHHHHHHhhHHhhhcccch
Confidence 3355777889999999999999999999998732 2145789999999999999999999999999987766
Q ss_pred --hHHHHHHHHHHHh-CCChHHHHHHHHHHHhchhhc
Q 014478 388 --PTALYLQAACLFS-LGMENDARETLKDGTNLEAKK 421 (424)
Q Consensus 388 --~~a~~~~g~~~~~-~~~~~~A~~~~~~al~l~~~~ 421 (424)
..++.++|.++.. +|++++|+..|++|+++.+..
T Consensus 115 ~~~~~~~~l~~~~~~~~~~~~~A~~~~~~A~~l~~~~ 151 (290)
T d1qqea_ 115 RGANFKFELGEILENDLHDYAKAIDCYELAGEWYAQD 151 (290)
T ss_dssp HHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHT
T ss_pred hHHHHHHHHHHhHhhHHHHHHHHHHHHHHHHHHHHhc
Confidence 6788899998855 799999999999999987653
|
| >d1ya0a1 a.118.8.1 (A:1-497) SMG-7 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: SMG-7 species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.81 E-value=1.1e-09 Score=105.64 Aligned_cols=100 Identities=9% Similarity=-0.126 Sum_probs=63.1
Q ss_pred HHHHHHHHHhHHHhhCCHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhcCCCchHHHHHHHHH
Q 014478 318 ETLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAAC 397 (424)
Q Consensus 318 ~~~~~~~~g~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~ 397 (424)
....+...|..+.+.|++++|+..|.++++.+|. .++.++|.++...+++++|+..|++|++++|++..+|+++|.+
T Consensus 119 ~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~~~---~~~~~LG~l~~~~~~~~~A~~~y~~A~~l~P~~~~~~~~Lg~~ 195 (497)
T d1ya0a1 119 CRVKSSQLGIISNKQTHTSAIVKPQSSSCSYICQ---HCLVHLGDIARYRNQTSQAESYYRHAAQLVPSNGQPYNQLAIL 195 (497)
T ss_dssp ------------------------CCHHHHHHHH---HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTBSHHHHHHHHH
T ss_pred hHHHHHHhHHHHHhCCCHHHHHHHHHHHhCCCHH---HHHHHHHHHHHHcccHHHHHHHHHHHHHHCCCchHHHHHHHHH
Confidence 3445566788888888888888888888876653 5677788888888888888888888888888888888888888
Q ss_pred HHhCCChHHHHHHHHHHHhchhh
Q 014478 398 LFSLGMENDARETLKDGTNLEAK 420 (424)
Q Consensus 398 ~~~~~~~~~A~~~~~~al~l~~~ 420 (424)
+...|++.+|+.+|.+|+.++|.
T Consensus 196 ~~~~~~~~~A~~~y~ral~~~~~ 218 (497)
T d1ya0a1 196 ASSKGDHLTTIFYYCRSIAVKFP 218 (497)
T ss_dssp HHHTTCHHHHHHHHHHHHSSSBC
T ss_pred HHHcCCHHHHHHHHHHHHhCCCC
Confidence 88888888888888888887763
|
| >d1dcea1 a.118.6.1 (A:1-241,A:351-443) Rab geranylgeranyltransferase alpha-subunit, N-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: Protein prenylyltransferase family: Protein prenylyltransferase domain: Rab geranylgeranyltransferase alpha-subunit, N-terminal domain species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=98.76 E-value=1.9e-08 Score=91.52 Aligned_cols=86 Identities=13% Similarity=0.070 Sum_probs=49.8
Q ss_pred CHHHHHHHHHHHhcCCCCCCHHH-HHHHHHHHHhcCChHHHHHHHHHHHhcCCCchHHHHHHHHHHHhCCChHHHHHHHH
Q 014478 334 DFSTAIDCYTQFIDGGTMVSPTV-YARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAACLFSLGMENDARETLK 412 (424)
Q Consensus 334 ~~~~A~~~~~~ai~~~p~~~~~~-~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~~~~~~~A~~~~~ 412 (424)
++++|+..+.++++.+|. +..+ +..++.++...+.+++|+..++++++++|++..+|+++|.++..+|++++|+..++
T Consensus 124 ~~~~a~~~~~~al~~~~~-~~~~~~~~~~~~~~~~~~~~~Al~~~~~~i~~~p~~~~a~~~l~~~~~~~~~~~~A~~~~~ 202 (334)
T d1dcea1 124 NWARELELCARFLEADER-NFHCWDYRRFVAAQAAVAPAEELAFTDSLITRNFSNYSSWHYRSCLLPQLHPQPDSGPQGR 202 (334)
T ss_dssp CHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTCCCHHHHHHHHHTTTTTTCCCHHHHHHHHHHHHHHSCCCCSSSCCS
T ss_pred cHHHHHHHHHHHHhhCch-hhhhhhhHHHHHHHhccccHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhcCHHHHHHHHH
Confidence 355666666666666665 4443 33455555555666666666666666666666666666666666666666666555
Q ss_pred HHHhchhh
Q 014478 413 DGTNLEAK 420 (424)
Q Consensus 413 ~al~l~~~ 420 (424)
++++++|+
T Consensus 203 ~~~~~~~~ 210 (334)
T d1dcea1 203 LPENVLLK 210 (334)
T ss_dssp SCHHHHHH
T ss_pred HhHHhHHH
Confidence 55555543
|
| >d1dcea1 a.118.6.1 (A:1-241,A:351-443) Rab geranylgeranyltransferase alpha-subunit, N-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: Protein prenylyltransferase family: Protein prenylyltransferase domain: Rab geranylgeranyltransferase alpha-subunit, N-terminal domain species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=98.71 E-value=4.8e-08 Score=88.74 Aligned_cols=87 Identities=6% Similarity=-0.106 Sum_probs=72.3
Q ss_pred CHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHhcCC--hHHHHHHHHHHHhcCCCchHHH-HHHHHHHHhCCChHHHHHH
Q 014478 334 DFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDM--PQEALGDAMQAQVVSPDWPTAL-YLQAACLFSLGMENDARET 410 (424)
Q Consensus 334 ~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~--~~~A~~~~~~al~~~p~~~~a~-~~~g~~~~~~~~~~~A~~~ 410 (424)
++++|+..|+++++.+|+ +..+|+++|.++..+++ +++|+..++++++++|.+..++ +..|.++...+++++|+..
T Consensus 88 ~~~~al~~~~~~l~~~pk-~~~~~~~~~~~~~~~~~~~~~~a~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~Al~~ 166 (334)
T d1dcea1 88 LVKAELGFLESCLRVNPK-SYGTWHHRCWLLSRLPEPNWARELELCARFLEADERNFHCWDYRRFVAAQAAVAPAEELAF 166 (334)
T ss_dssp HHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHTCSSCCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTCCCHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCC-cHHHHHHhhHHHHHhccccHHHHHHHHHHHHhhCchhhhhhhhHHHHHHHhccccHHHHHH
Confidence 377888888888888888 88888888888877765 7888888888888888888876 4567888888888888888
Q ss_pred HHHHHhchhhc
Q 014478 411 LKDGTNLEAKK 421 (424)
Q Consensus 411 ~~~al~l~~~~ 421 (424)
++++++++|.+
T Consensus 167 ~~~~i~~~p~~ 177 (334)
T d1dcea1 167 TDSLITRNFSN 177 (334)
T ss_dssp HHTTTTTTCCC
T ss_pred HHHHHHcCCCC
Confidence 88888888864
|
| >d1qqea_ a.118.8.1 (A:) Vesicular transport protein sec17 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Vesicular transport protein sec17 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=98.70 E-value=2.5e-08 Score=88.84 Aligned_cols=104 Identities=9% Similarity=-0.199 Sum_probs=88.5
Q ss_pred HHHHHHHHHhHHHhhCCHHHHHHHHHHHhcCCCCC-----CHHHHHHHHHHHHh-cCChHHHHHHHHHHHhcCCC-----
Q 014478 318 ETLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMV-----SPTVYARRCLSYLM-NDMPQEALGDAMQAQVVSPD----- 386 (424)
Q Consensus 318 ~~~~~~~~g~~~~~~g~~~~A~~~~~~ai~~~p~~-----~~~~~~~~~~~~~~-~~~~~~A~~~~~~al~~~p~----- 386 (424)
.+..+...|..+.+.|++++|++.|.+++++.+.. ...++.++|.+|.. .|++++|++.|++|+++.+.
T Consensus 76 ~a~~~~~~g~~y~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~A~~~~~~A~~l~~~~~~~~ 155 (290)
T d1qqea_ 76 AGNTYVEAYKCFKSGGNSVNAVDSLENAIQIFTHRGQFRRGANFKFELGEILENDLHDYAKAIDCYELAGEWYAQDQSVA 155 (290)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTCHH
T ss_pred HHHHHHHHHHHHHHhCCcHHHHHHHHHhhHHhhhcccchhHHHHHHHHHHhHhhHHHHHHHHHHHHHHHHHHHHhcCchh
Confidence 45677888999999999999999999999886651 15778888888854 79999999999999987433
Q ss_pred -chHHHHHHHHHHHhCCChHHHHHHHHHHHhchhhc
Q 014478 387 -WPTALYLQAACLFSLGMENDARETLKDGTNLEAKK 421 (424)
Q Consensus 387 -~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~ 421 (424)
...++.++|.++..+|+|++|+..|+++++..+..
T Consensus 156 ~~~~~~~~la~~~~~~g~y~~A~~~~~~~~~~~~~~ 191 (290)
T d1qqea_ 156 LSNKCFIKCADLKALDGQYIEASDIYSKLIKSSMGN 191 (290)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTSSC
T ss_pred hhhhHHHHHHHHHHHcChHHHHHHHHHHHHHhCccc
Confidence 35678999999999999999999999999988764
|
| >d1hz4a_ a.118.8.2 (A:) Transcription factor MalT domain III {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Transcription factor MalT domain III domain: Transcription factor MalT domain III species: Escherichia coli [TaxId: 562]
Probab=98.70 E-value=5.7e-08 Score=87.77 Aligned_cols=107 Identities=12% Similarity=-0.028 Sum_probs=92.2
Q ss_pred HhHHHHHHHHHHHhHHHhhCCHHHHHHHHHHHhcCCCCCC----HHHHHHHHHHHHhcCChHHHHHHHHHHHhcCCCc--
Q 014478 314 SQMQETLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVS----PTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDW-- 387 (424)
Q Consensus 314 ~~~~~~~~~~~~g~~~~~~g~~~~A~~~~~~ai~~~p~~~----~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~-- 387 (424)
+....++....+|..++..|++++|++.|+++++..|+++ ..++.++|.+|..+|++++|+..+++++++.+..
T Consensus 7 ~~~~~ae~~~lrA~~~~~~g~~~~A~~~~~~aL~~~~~~~~~~~~~a~~~lg~~~~~~g~~~~A~~~~~~a~~~~~~~~~ 86 (366)
T d1hz4a_ 7 EDTMHAEFNALRAQVAINDGNPDEAERLAKLALEELPPGWFYSRIVATSVLGEVLHCKGELTRSLALMQQTEQMARQHDV 86 (366)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTCCTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTC
T ss_pred ccchhHHHHHHHHHHHHHCCCHHHHHHHHHHHHhhCcCCCcHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhhcc
Confidence 3444566666689999999999999999999999999833 3578899999999999999999999999876543
Q ss_pred ----hHHHHHHHHHHHhCCChHHHHHHHHHHHhchhh
Q 014478 388 ----PTALYLQAACLFSLGMENDARETLKDGTNLEAK 420 (424)
Q Consensus 388 ----~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~ 420 (424)
..+++++|.++...|++..|...+.+++++.+.
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~al~~~~~ 123 (366)
T d1hz4a_ 87 WHYALWSLIQQSEILFAQGFLQTAWETQEKAFQLINE 123 (366)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHh
Confidence 457889999999999999999999999987764
|
| >d1ya0a1 a.118.8.1 (A:1-497) SMG-7 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: SMG-7 species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.50 E-value=1.3e-07 Score=90.79 Aligned_cols=82 Identities=13% Similarity=-0.055 Sum_probs=77.1
Q ss_pred HHHHHHHhHHHhhCCHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhcCCCchHHHHHHHHHHH
Q 014478 320 LNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAACLF 399 (424)
Q Consensus 320 ~~~~~~g~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~ 399 (424)
..+...|..+...|+|++|+.+|.+|++++|+ +...|+++|.+|...|++.+|+..|.+||.++|.++.|+.+++.++.
T Consensus 153 ~~~~~LG~l~~~~~~~~~A~~~y~~A~~l~P~-~~~~~~~Lg~~~~~~~~~~~A~~~y~ral~~~~~~~~a~~nL~~~~~ 231 (497)
T d1ya0a1 153 HCLVHLGDIARYRNQTSQAESYYRHAAQLVPS-NGQPYNQLAILASSKGDHLTTIFYYCRSIAVKFPFPAASTNLQKALS 231 (497)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-BSHHHHHHHHHHHHTTCHHHHHHHHHHHHSSSBCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcccHHHHHHHHHHHHHHCCC-chHHHHHHHHHHHHcCCHHHHHHHHHHHHhCCCCCHHHHHHHHHHHH
Confidence 35667899999999999999999999999999 99999999999999999999999999999999999999999999886
Q ss_pred hCC
Q 014478 400 SLG 402 (424)
Q Consensus 400 ~~~ 402 (424)
+..
T Consensus 232 ~~~ 234 (497)
T d1ya0a1 232 KAL 234 (497)
T ss_dssp HHT
T ss_pred Hhh
Confidence 544
|
| >d1hz4a_ a.118.8.2 (A:) Transcription factor MalT domain III {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Transcription factor MalT domain III domain: Transcription factor MalT domain III species: Escherichia coli [TaxId: 562]
Probab=98.47 E-value=2.9e-07 Score=82.91 Aligned_cols=102 Identities=13% Similarity=0.014 Sum_probs=88.9
Q ss_pred HHHHHHHHhHHHhhCCHHHHHHHHHHHhcCCCCCC---HHHHHHHHHHHHhcCChHHHHHHHHHHH------hcCCCchH
Q 014478 319 TLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVS---PTVYARRCLSYLMNDMPQEALGDAMQAQ------VVSPDWPT 389 (424)
Q Consensus 319 ~~~~~~~g~~~~~~g~~~~A~~~~~~ai~~~p~~~---~~~~~~~~~~~~~~~~~~~A~~~~~~al------~~~p~~~~ 389 (424)
.......|..+...|++++|...|.++++..|.+. ...+.++|.+|..+|++++|+..+++++ ...|+...
T Consensus 213 ~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~ 292 (366)
T d1hz4a_ 213 SNANKVRVIYWQMTGDKAAAANWLRHTAKPEFANNHFLQGQWRNIARAQILLGEFEPAEIVLEELNENARSLRLMSDLNR 292 (366)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHSCCCCCTTCGGGHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHH
T ss_pred HHHHHHHHHHHHhcccHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhhcccChHHHH
Confidence 33456678888999999999999999999887622 3567789999999999999999999998 44677888
Q ss_pred HHHHHHHHHHhCCChHHHHHHHHHHHhchhh
Q 014478 390 ALYLQAACLFSLGMENDARETLKDGTNLEAK 420 (424)
Q Consensus 390 a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~ 420 (424)
++..+|.+|..+|++++|++.|++|+++.+.
T Consensus 293 ~~~~la~~~~~~g~~~~A~~~l~~Al~l~~~ 323 (366)
T d1hz4a_ 293 NLLLLNQLYWQAGRKSDAQRVLLDALKLANR 323 (366)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHHHhhh
Confidence 9999999999999999999999999998654
|
| >d2hr2a1 a.118.8.8 (A:2-157) Hypothetical protein CT2138 {Chlorobium tepidum [TaxId: 1097]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: CT2138-like domain: Hypothetical protein CT2138 species: Chlorobium tepidum [TaxId: 1097]
Probab=98.47 E-value=1.7e-07 Score=74.98 Aligned_cols=67 Identities=16% Similarity=0.071 Sum_probs=58.9
Q ss_pred HHHHHHH--HHHHHhcCChHHHHHHHHHHHhcCCCch------------HHHHHHHHHHHhCCChHHHHHHHHHHHhchh
Q 014478 354 PTVYARR--CLSYLMNDMPQEALGDAMQAQVVSPDWP------------TALYLQAACLFSLGMENDARETLKDGTNLEA 419 (424)
Q Consensus 354 ~~~~~~~--~~~~~~~~~~~~A~~~~~~al~~~p~~~------------~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~ 419 (424)
..++.++ |..++..|+|++|+..|++||+++|+.+ .+|.++|.+|..+|+|++|+.++++++++.+
T Consensus 7 a~a~~~l~~g~~~~~~g~y~~Ai~~y~~Al~i~~~~~~~~~~~~~~~~a~~~~nlg~~~~~lg~~~~A~~~~~~al~~~~ 86 (156)
T d2hr2a1 7 VGAYLALSDAQRQLVAGEYDEAAANCRRAMEISHTMPPEEAFDHAGFDAFCHAGLAEALAGLRSFDEALHSADKALHYFN 86 (156)
T ss_dssp HHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTSCTTSCCCHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhChhhhhhhhcccchhHHHHHHHHHHHHHHcCccchhhHhhhhhhhccc
Confidence 3455555 7788899999999999999999988754 5899999999999999999999999999987
Q ss_pred h
Q 014478 420 K 420 (424)
Q Consensus 420 ~ 420 (424)
+
T Consensus 87 ~ 87 (156)
T d2hr2a1 87 R 87 (156)
T ss_dssp H
T ss_pred c
Confidence 5
|
| >d2pqrb1 a.118.8.1 (B:5-128) Mitochondria fission protein Fis1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Mitochondria fission protein Fis1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=98.39 E-value=9e-07 Score=66.26 Aligned_cols=60 Identities=5% Similarity=-0.198 Sum_probs=29.8
Q ss_pred HHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhcCCCchHHHHHH
Q 014478 335 FSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQ 394 (424)
Q Consensus 335 ~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~ 394 (424)
.++|+..++++++.+|....++++++|.+|.++|+|++|...++++|+++|+|.+|...+
T Consensus 54 ~~~gI~lLe~~~~~~p~~~rd~lY~Lav~yyklgdy~~A~~~~~~~L~ieP~n~qA~~L~ 113 (124)
T d2pqrb1 54 ERLGVKILTDIYKEAESRRRECLYYLTIGCYKLGEYSMAKRYVDTLFEHERNNKQVGALK 113 (124)
T ss_dssp HHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHH
T ss_pred HHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHhhHHHHHHHHHHHHccCCCcHHHHHHH
Confidence 344555555555555441224555555555555555555555555555555555554433
|
| >d1j7la_ d.144.1.6 (A:) Type IIIa 3',5"-aminoglycoside phosphotransferase {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: Type IIIa 3',5"-aminoglycoside phosphotransferase species: Enterococcus faecalis [TaxId: 1351]
Probab=98.32 E-value=8.7e-07 Score=77.21 Aligned_cols=126 Identities=9% Similarity=-0.049 Sum_probs=83.6
Q ss_pred cccceeeeecceecccccCCCc-hhhhHHHHHHHHHhcCC-CcCcceeEEEEEeCCeeeEEEecCCCCCHHhHhccCCCC
Q 014478 5 CSKFSICWFHCHLKSSVLESSD-LGETLNLEEAKAVGNLR-SERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQ 82 (424)
Q Consensus 5 g~v~~~~~~~~~v~~~~~~~~~-~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~ 82 (424)
..||+....+..+.+|+..... .....+.+|...+..+. +-.+++++.++..++..++||++++|.++.+....
T Consensus 28 ~~v~rv~~~~~~~vlk~~~~~~~~~~~~~~~E~~~l~~l~~~vpvP~vl~~~~~~~~~~lv~~~l~G~~~~~~~~~---- 103 (263)
T d1j7la_ 28 AKVYKLVGENENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNLLMSEADGVLCSEEYED---- 103 (263)
T ss_dssp SEEEEEECSSCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCSSEEHHHHTTT----
T ss_pred CcEEEEEeCCCeEEEEEcCCCcccchhhHHHHHHHHHHHhccCCCCcEEEEEecCCceEEEEEecccccccccccc----
Confidence 4577766555555555543332 23446778999888773 44478899999888889999999999888665421
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHhC-----------------------------------------------------C--
Q 014478 83 PMKWAMRLRVALYLAQALEYCSSK-----------------------------------------------------G-- 107 (424)
Q Consensus 83 ~l~~~~~~~i~~qi~~~L~~lH~~-----------------------------------------------------~-- 107 (424)
... ...++.++...|..||+. .
T Consensus 104 ~~~---~~~~~~~l~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 180 (263)
T d1j7la_ 104 EQS---PEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENWEEDTPFKDPRELYDFLKTEKPE 180 (263)
T ss_dssp CSC---HHHHHHHHHHHHHHHHTSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCCGGGGSTTCSCSSHHHHHHHHHHSCCC
T ss_pred ccc---HHHHHHHHHHHHHHHhccCccccccCcchhhhhhhHHHHHHHHhhhhhhhcccccccchHHHHHHHHHHhcCCc
Confidence 111 122344444444444421 0
Q ss_pred -C--cccccCCCCCeeecCCCCeEEcccccccc
Q 014478 108 -R--ALYHDLNAYRILFDKDGNPRLSSFGLMKN 137 (424)
Q Consensus 108 -~--ivH~dikp~Nill~~~~~~kl~Dfg~~~~ 137 (424)
+ ++|+|+.|.|||+++++.+.|+||+.+..
T Consensus 181 ~~~~l~HgD~~~~Nil~~~~~~~~lIDwe~a~~ 213 (263)
T d1j7la_ 181 EELVFSHGDLGDSNIFVKDGKVSGFIDLGRSGR 213 (263)
T ss_dssp CCEEEECSCCCTTSEEEETTEEEEECCCTTCEE
T ss_pred CCcEEEEeeccCcceeecCCceEEEeechhccc
Confidence 0 68999999999999776667999986553
|
| >d2onda1 a.118.8.7 (A:242-549) Cleavage stimulation factor 77 kDa subunit CSTF3 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: HAT/Suf repeat domain: Cleavage stimulation factor 77 kDa subunit CSTF3 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=98.24 E-value=4.3e-06 Score=74.58 Aligned_cols=98 Identities=13% Similarity=0.014 Sum_probs=84.4
Q ss_pred HHHHHhHHHhhCCHHHHHHHHHHHhcCCCCCCHHHHHHHHHHH-HhcCChHHHHHHHHHHHhcCCCchHHHHHHHHHHHh
Q 014478 322 SKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSY-LMNDMPQEALGDAMQAQVVSPDWPTALYLQAACLFS 400 (424)
Q Consensus 322 ~~~~g~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~-~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~ 400 (424)
+...++...+.|++++|.+.|.++++..|. ....|...|... ...|+.+.|...|++++..+|+++..|...+..+..
T Consensus 137 w~~~~~~~~~~~~~~~ar~i~~~al~~~~~-~~~~~~~~a~~e~~~~~~~~~a~~i~e~~l~~~p~~~~~w~~y~~~~~~ 215 (308)
T d2onda1 137 YIQYMKFARRAEGIKSGRMIFKKAREDART-RHHVYVTAALMEYYCSKDKSVAFKIFELGLKKYGDIPEYVLAYIDYLSH 215 (308)
T ss_dssp HHHHHHHHHHHHCHHHHHHHHHHHHTSTTC-CTHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHcCChHHHHHHHHHHHHhCCC-cHHHHHHHHHHHHHhccCHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHH
Confidence 455666677888999999999999999998 888888777654 446889999999999999999999999999999999
Q ss_pred CCChHHHHHHHHHHHhchhh
Q 014478 401 LGMENDARETLKDGTNLEAK 420 (424)
Q Consensus 401 ~~~~~~A~~~~~~al~l~~~ 420 (424)
+|+++.|+..|++|++..|.
T Consensus 216 ~g~~~~aR~~fe~ai~~~~~ 235 (308)
T d2onda1 216 LNEDNNTRVLFERVLTSGSL 235 (308)
T ss_dssp TCCHHHHHHHHHHHHHSSSS
T ss_pred cCChHHHHHHHHHHHHhCCC
Confidence 99999999999999987653
|
| >d2pqrb1 a.118.8.1 (B:5-128) Mitochondria fission protein Fis1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Mitochondria fission protein Fis1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=98.20 E-value=2e-06 Score=64.30 Aligned_cols=73 Identities=8% Similarity=-0.006 Sum_probs=64.1
Q ss_pred CCCCHHHHHHHHHHHHhcCC---hHHHHHHHHHHHhcCCCch-HHHHHHHHHHHhCCChHHHHHHHHHHHhchhhcC
Q 014478 350 TMVSPTVYARRCLSYLMNDM---PQEALGDAMQAQVVSPDWP-TALYLQAACLFSLGMENDARETLKDGTNLEAKKN 422 (424)
Q Consensus 350 p~~~~~~~~~~~~~~~~~~~---~~~A~~~~~~al~~~p~~~-~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~~ 422 (424)
|.......++.|.++.+..+ .++|+..+++++..+|.+. +++|++|.+|+++|+|++|+.+++++|+++|.+.
T Consensus 31 ~~~s~qt~F~YAw~Lv~S~~~~d~~~gI~lLe~~~~~~p~~~rd~lY~Lav~yyklgdy~~A~~~~~~~L~ieP~n~ 107 (124)
T d2pqrb1 31 PTATIQSRFNYAWGLIKSTDVNDERLGVKILTDIYKEAESRRRECLYYLTIGCYKLGEYSMAKRYVDTLFEHERNNK 107 (124)
T ss_dssp GGSCHHHHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCH
T ss_pred CCCCcchHHHHHHHHHcCCcHHHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHhhHHHHHHHHHHHHccCCCcH
Confidence 33357788999999987654 5789999999999999775 8999999999999999999999999999999864
|
| >d1zbpa1 e.61.1.1 (A:2-265) Hypothetical protein VPA1032 {Vibrio parahaemolyticus [TaxId: 670]} | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: ImpE-like superfamily: ImpE-like family: ImpE-like domain: Hypothetical protein VPA1032 species: Vibrio parahaemolyticus [TaxId: 670]
Probab=98.13 E-value=1.9e-06 Score=74.92 Aligned_cols=59 Identities=22% Similarity=0.050 Sum_probs=56.0
Q ss_pred HHHhcCChHHHHHHHHHHHhcCCCchHHHHHHHHHHHhCCChHHHHHHHHHHHhchhhc
Q 014478 363 SYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAACLFSLGMENDARETLKDGTNLEAKK 421 (424)
Q Consensus 363 ~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~ 421 (424)
-.++.|++++|+..++++++.+|+++.++..+|.+|..+|++++|++.|+++++++|+.
T Consensus 5 ~aL~~G~l~eAl~~l~~al~~~P~d~~ar~~La~lL~~~G~~e~A~~~l~~a~~l~P~~ 63 (264)
T d1zbpa1 5 NALSEGQLQQALELLIEAIKASPKDASLRSSFIELLCIDGDFERADEQLMQSIKLFPEY 63 (264)
T ss_dssp HHTTTTCHHHHHHHHHHHHHTCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCGGG
T ss_pred HHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCc
Confidence 35678999999999999999999999999999999999999999999999999999974
|
| >d2onda1 a.118.8.7 (A:242-549) Cleavage stimulation factor 77 kDa subunit CSTF3 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: HAT/Suf repeat domain: Cleavage stimulation factor 77 kDa subunit CSTF3 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=98.10 E-value=1.2e-05 Score=71.49 Aligned_cols=101 Identities=8% Similarity=-0.093 Sum_probs=89.3
Q ss_pred HHHHHHhHHHhhCCHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhcCCCchHHHHHHHHHH-H
Q 014478 321 NSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAACL-F 399 (424)
Q Consensus 321 ~~~~~g~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~-~ 399 (424)
-+...+......|++++|...|+++++..|.+...+|...+....+.+++++|.+.|++|++..|.....|...|... .
T Consensus 101 l~~~ya~~~~~~~~~~~a~~i~~~~l~~~~~~~~~~w~~~~~~~~~~~~~~~ar~i~~~al~~~~~~~~~~~~~a~~e~~ 180 (308)
T d2onda1 101 LYFAYADYEESRMKYEKVHSIYNRLLAIEDIDPTLVYIQYMKFARRAEGIKSGRMIFKKAREDARTRHHVYVTAALMEYY 180 (308)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHTSSSSCTHHHHHHHHHHHHHHHCHHHHHHHHHHHHTSTTCCTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcccHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCcHHHHHHHHHHHHH
Confidence 344567777889999999999999999999844567899999999999999999999999999999999999999875 4
Q ss_pred hCCChHHHHHHHHHHHhchhhc
Q 014478 400 SLGMENDARETLKDGTNLEAKK 421 (424)
Q Consensus 400 ~~~~~~~A~~~~~~al~l~~~~ 421 (424)
..|+.+.|...|+++++.+|.+
T Consensus 181 ~~~~~~~a~~i~e~~l~~~p~~ 202 (308)
T d2onda1 181 CSKDKSVAFKIFELGLKKYGDI 202 (308)
T ss_dssp TSCCHHHHHHHHHHHHHHHTTC
T ss_pred hccCHHHHHHHHHHHHHhhhhh
Confidence 5689999999999999998864
|
| >d2ff4a2 a.118.8.3 (A:105-283) Probable regulatory protein EmbR, middle domain {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: BTAD-like domain: Probable regulatory protein EmbR, middle domain species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=97.93 E-value=1.9e-05 Score=64.10 Aligned_cols=68 Identities=13% Similarity=0.176 Sum_probs=61.8
Q ss_pred HHHHHHHHhHHHhhCCHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHH-------HhcCCCc
Q 014478 319 TLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQA-------QVVSPDW 387 (424)
Q Consensus 319 ~~~~~~~g~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a-------l~~~p~~ 387 (424)
...+...|..+...|++++|+..++++++.+|. +..+|.+++.+|..+|++.+|+..|+++ +.++|..
T Consensus 67 ~~a~~~la~~~~~~g~~~~Al~~~~~al~~~P~-~e~~~~~l~~al~~~Gr~~eAl~~y~~~~~~L~~eLG~~P~~ 141 (179)
T d2ff4a2 67 VLAHTAKAEAEIACGRASAVIAELEALTFEHPY-REPLWTQLITAYYLSDRQSDALGAYRRVKTTLADDLGIDPGP 141 (179)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT-CHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHSCCCCH
T ss_pred HHHHHHHHHHHHHCCCchHHHHHHHHHHHhCCc-cHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhCCCcCH
Confidence 345667899999999999999999999999999 9999999999999999999999999998 5577763
|
| >d1ouva_ a.118.18.1 (A:) Cysteine rich protein C (HcpC) {Helicobacter pylori [TaxId: 210]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: HCP-like family: HCP-like domain: Cysteine rich protein C (HcpC) species: Helicobacter pylori [TaxId: 210]
Probab=97.85 E-value=0.0001 Score=63.45 Aligned_cols=96 Identities=15% Similarity=0.123 Sum_probs=83.3
Q ss_pred HHHHHHHHhHHHhhCCHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHh----cCChHHHHHHHHHHHhcCCCchHHHHHH
Q 014478 319 TLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLM----NDMPQEALGDAMQAQVVSPDWPTALYLQ 394 (424)
Q Consensus 319 ~~~~~~~g~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~----~~~~~~A~~~~~~al~~~p~~~~a~~~~ 394 (424)
+..+...|..++.+|++++|+++|++|.+. + +..+++++|.+|.. ..++..|...++++... .++.+.+++
T Consensus 2 p~~~~~lG~~~~~~~d~~~A~~~~~kAa~~--g-~~~A~~~Lg~~y~~G~~~~~d~~~a~~~~~~a~~~--~~~~a~~~l 76 (265)
T d1ouva_ 2 PKELVGLGAKSYKEKDFTQAKKYFEKACDL--K-ENSGCFNLGVLYYQGQGVEKNLKKAASFYAKACDL--NYSNGCHLL 76 (265)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHT--T-CHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHT--TCHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHC--C-CHHHHHHHHHHHHcCCCcchhHHHHHHhhcccccc--cccchhhcc
Confidence 346778899999999999999999999875 4 78899999999997 67899999999998876 488899999
Q ss_pred HHHHHh----CCChHHHHHHHHHHHhchh
Q 014478 395 AACLFS----LGMENDARETLKDGTNLEA 419 (424)
Q Consensus 395 g~~~~~----~~~~~~A~~~~~~al~l~~ 419 (424)
|..+.. .++.+.|...|+.+.+..+
T Consensus 77 ~~~~~~~~~~~~~~~~a~~~~~~a~~~g~ 105 (265)
T d1ouva_ 77 GNLYYSGQGVSQNTNKALQYYSKACDLKY 105 (265)
T ss_dssp HHHHHHTSSSCCCHHHHHHHHHHHHHTTC
T ss_pred ccccccccccchhhHHHHHHHhhhhhhhh
Confidence 998875 5789999999999987654
|
| >d1klxa_ a.118.18.1 (A:) Cysteine rich protein B (HcpB) {Helicobacter pylori [TaxId: 210]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: HCP-like family: HCP-like domain: Cysteine rich protein B (HcpB) species: Helicobacter pylori [TaxId: 210]
Probab=97.78 E-value=0.00016 Score=55.19 Aligned_cols=85 Identities=9% Similarity=-0.056 Sum_probs=73.5
Q ss_pred hhCCHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHh----cCChHHHHHHHHHHHhcCCCchHHHHHHHHHHHh----CC
Q 014478 331 RAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLM----NDMPQEALGDAMQAQVVSPDWPTALYLQAACLFS----LG 402 (424)
Q Consensus 331 ~~g~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~----~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~----~~ 402 (424)
...++++|++.|.++.+. + +..+.+++|..|.. ..++++|++.|++|.+. .++.+.+++|.+|.. ..
T Consensus 35 ~~~~~~~a~~~~~~aa~~--g-~~~a~~~Lg~~y~~g~~~~~d~~~A~~~~~~aa~~--g~~~a~~~Lg~~y~~G~gv~~ 109 (133)
T d1klxa_ 35 SQINKQKLFQYLSKACEL--N-SGNGCRFLGDFYENGKYVKKDLRKAAQYYSKACGL--NDQDGCLILGYKQYAGKGVVK 109 (133)
T ss_dssp TTSCHHHHHHHHHHHHHT--T-CHHHHHHHHHHHHHCSSSCCCHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHTSSSCC
T ss_pred cccCHHHHHHHHhhhhcc--c-chhhhhhHHHhhhhccccchhhHHHHHHHhhhhcc--CcchHHHHHHHHHHcCCccCC
Confidence 346899999999999875 4 78889999999986 46789999999999987 689999999999987 57
Q ss_pred ChHHHHHHHHHHHhchhh
Q 014478 403 MENDARETLKDGTNLEAK 420 (424)
Q Consensus 403 ~~~~A~~~~~~al~l~~~ 420 (424)
++++|+..|++|.++...
T Consensus 110 d~~~A~~~~~~Aa~~G~~ 127 (133)
T d1klxa_ 110 NEKQAVKTFEKACRLGSE 127 (133)
T ss_dssp CHHHHHHHHHHHHHTTCH
T ss_pred CHHHHHHHHHHHHHCCCH
Confidence 999999999999887543
|
| >d1nd4a_ d.144.1.6 (A:) Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) {Bacteria (Klebsiella pneumoniae) [TaxId: 573]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) species: Bacteria (Klebsiella pneumoniae) [TaxId: 573]
Probab=97.64 E-value=5.2e-05 Score=65.13 Aligned_cols=67 Identities=18% Similarity=0.074 Sum_probs=43.9
Q ss_pred cccceeeeecc-eecccccCCCchhhhHHHHHHHHHhcCC--CcCcceeEEEEEeCCeeeEEEecCCCCCHH
Q 014478 5 CSKFSICWFHC-HLKSSVLESSDLGETLNLEEAKAVGNLR--SERLANLIGCCYEADERLLVAEFMPNETLA 73 (424)
Q Consensus 5 g~v~~~~~~~~-~v~~~~~~~~~~~~~~~~~E~~~l~~l~--h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~ 73 (424)
+.||+....+. .+.+|..... ....+..|+..++.+. .-.+++++.++.+++..++||++++|.++.
T Consensus 25 ~~v~r~~~~~~~~~vlK~~~~~--~~~~l~~E~~~l~~L~~~gvpvP~v~~~~~~~~~~~~v~~~i~G~~~~ 94 (255)
T d1nd4a_ 25 AAVFRLSAQGRPVLFVKTDLSG--ALNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEVPGQDLL 94 (255)
T ss_dssp CEEEEEECTTSCCEEEEEECSC--TTSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEECCSSEETT
T ss_pred CeEEEEEeCCCCEEEEEeCCcc--CHhHHHHHHHHHHHHHhcCCCCCceeeecccccceEEEEEeeeccccc
Confidence 34565554333 3333433222 2345778888888773 344788899888888889999999987653
|
| >d1ouva_ a.118.18.1 (A:) Cysteine rich protein C (HcpC) {Helicobacter pylori [TaxId: 210]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: HCP-like family: HCP-like domain: Cysteine rich protein C (HcpC) species: Helicobacter pylori [TaxId: 210]
Probab=97.43 E-value=0.00091 Score=57.19 Aligned_cols=95 Identities=21% Similarity=0.157 Sum_probs=78.6
Q ss_pred HHHHHHhHHHh----hCCHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHh----cCChHHHHHHHHHHHhcCCCchHHHH
Q 014478 321 NSKKHGDTAFR----AKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLM----NDMPQEALGDAMQAQVVSPDWPTALY 392 (424)
Q Consensus 321 ~~~~~g~~~~~----~g~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~----~~~~~~A~~~~~~al~~~p~~~~a~~ 392 (424)
.....|..+.. ..+...+...+..+.+ +. +..+.+++|.+|.. ..++++|+..|++|.+. .++.+++
T Consensus 144 ~~~~L~~~~~~~~~~~~~~~~~~~~~~~a~~--~g-~~~A~~~lg~~y~~g~~~~~d~~~A~~~~~~aa~~--g~~~a~~ 218 (265)
T d1ouva_ 144 GCTILGSLYDAGRGTPKDLKKALASYDKACD--LK-DSPGCFNAGNMYHHGEGATKNFKEALARYSKACEL--ENGGGCF 218 (265)
T ss_dssp HHHHHHHHHHHTSSSCCCHHHHHHHHHHHHH--TT-CHHHHHHHHHHHHHTCSSCCCHHHHHHHHHHHHHT--TCHHHHH
T ss_pred hhhhhhhhhccCCCcccccccchhhhhcccc--cc-ccccccchhhhcccCcccccchhhhhhhHhhhhcc--cCHHHHH
Confidence 33445555554 4678889999999886 44 78999999999987 67899999999999998 5799999
Q ss_pred HHHHHHHh----CCChHHHHHHHHHHHhchhh
Q 014478 393 LQAACLFS----LGMENDARETLKDGTNLEAK 420 (424)
Q Consensus 393 ~~g~~~~~----~~~~~~A~~~~~~al~l~~~ 420 (424)
++|.+|.. .+++++|++.|++|.++..+
T Consensus 219 ~LG~~y~~G~g~~~n~~~A~~~~~kAa~~g~~ 250 (265)
T d1ouva_ 219 NLGAMQYNGEGVTRNEKQAIENFKKGCKLGAK 250 (265)
T ss_dssp HHHHHHHTTSSSSCCSTTHHHHHHHHHHHTCH
T ss_pred HHHHHHHcCCCCccCHHHHHHHHHHHHHCcCH
Confidence 99999986 55999999999999887654
|
| >d1klxa_ a.118.18.1 (A:) Cysteine rich protein B (HcpB) {Helicobacter pylori [TaxId: 210]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: HCP-like family: HCP-like domain: Cysteine rich protein B (HcpB) species: Helicobacter pylori [TaxId: 210]
Probab=97.21 E-value=0.0006 Score=51.90 Aligned_cols=79 Identities=11% Similarity=-0.048 Sum_probs=65.2
Q ss_pred CCHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhcCCCchHHHHHHHHHHHh----CCChHHHH
Q 014478 333 KDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAACLFS----LGMENDAR 408 (424)
Q Consensus 333 g~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~----~~~~~~A~ 408 (424)
.|+++|++.|.+|.+.. +..+.++++. ....++++|+..++++.+. .++.+.+++|..|.. ..++++|+
T Consensus 7 kd~~~A~~~~~kaa~~g---~~~a~~~l~~--~~~~~~~~a~~~~~~aa~~--g~~~a~~~Lg~~y~~g~~~~~d~~~A~ 79 (133)
T d1klxa_ 7 KDLKKAIQYYVKACELN---EMFGCLSLVS--NSQINKQKLFQYLSKACEL--NSGNGCRFLGDFYENGKYVKKDLRKAA 79 (133)
T ss_dssp HHHHHHHHHHHHHHHTT---CTTHHHHHHT--CTTSCHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHCSSSCCCHHHHH
T ss_pred cCHHHHHHHHHHHHHCC---Chhhhhhhcc--ccccCHHHHHHHHhhhhcc--cchhhhhhHHHhhhhccccchhhHHHH
Confidence 47899999999999875 3444555553 4456899999999999886 689999999999986 56899999
Q ss_pred HHHHHHHhch
Q 014478 409 ETLKDGTNLE 418 (424)
Q Consensus 409 ~~~~~al~l~ 418 (424)
+.|+++.+..
T Consensus 80 ~~~~~aa~~g 89 (133)
T d1klxa_ 80 QYYSKACGLN 89 (133)
T ss_dssp HHHHHHHHTT
T ss_pred HHHhhhhccC
Confidence 9999998765
|
| >d2pula1 d.144.1.6 (A:5-396) Methylthioribose kinase MtnK {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: Methylthioribose kinase MtnK species: Bacillus subtilis [TaxId: 1423]
Probab=96.90 E-value=0.00078 Score=61.58 Aligned_cols=27 Identities=11% Similarity=0.076 Sum_probs=23.4
Q ss_pred cccccCCCCCeeecCCCCeEEccccccc
Q 014478 109 ALYHDLNAYRILFDKDGNPRLSSFGLMK 136 (424)
Q Consensus 109 ivH~dikp~Nill~~~~~~kl~Dfg~~~ 136 (424)
++|||+.|.|||++.++ ++|+||..+.
T Consensus 225 LiHGDl~~gNIlv~~~~-~~vID~E~a~ 251 (392)
T d2pula1 225 LIHGDLHTGSIFASEHE-TKVIDPEFAF 251 (392)
T ss_dssp EECSCCCGGGEEECSSC-EEECCCTTCE
T ss_pred eeccCCcCCceeEcCCc-eEEechhhcc
Confidence 89999999999998664 8999997654
|
| >d1zyla1 d.144.1.6 (A:4-328) RdoA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: RdoA species: Escherichia coli [TaxId: 562]
Probab=95.37 E-value=0.012 Score=51.88 Aligned_cols=65 Identities=9% Similarity=-0.045 Sum_probs=38.3
Q ss_pred cceeee-ecceecccccCCCchhhhHHHHHHHHHhcCCCcCc--ceeE-----EEEEeCCeeeEEEecCCCCC
Q 014478 7 KFSICW-FHCHLKSSVLESSDLGETLNLEEAKAVGNLRSERL--ANLI-----GCCYEADERLLVAEFMPNET 71 (424)
Q Consensus 7 v~~~~~-~~~~v~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i--v~~~-----~~~~~~~~~~lv~e~~~~gs 71 (424)
||.... .+..+.+|+........+.+..|...+..|....| +... ..+..+...+.++++++|..
T Consensus 38 vy~v~~~dg~~~VlK~~rp~~~s~~~i~~E~~~l~~L~~~gipv~~p~~~~g~~~~~~~~~~~~l~~~~~G~~ 110 (325)
T d1zyla1 38 VYQFQDEDRRRFVVKFYRPERWTADQILEEHQFALQLVNDEVPVAAPVAFNGQTLLNHQGFYFAVFPSVGGRQ 110 (325)
T ss_dssp EEEECCTTCCCEEEEEECTTTSCHHHHHHHHHHHHHHHHTTCSBCCCCCBTTBSCEEETTEEEEEEECCCCEE
T ss_pred eEEEEcCCCCEEEEEEeCCCCCCHHHHHHHHHHHHHHHhcCCCCCCceecCCCeeeeeeeEEEEEEeecCCcC
Confidence 444443 45556666655554456778889988888742222 1111 12234556789999998743
|
| >d1nw1a_ d.144.1.8 (A:) Choline kinase {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Choline kinase domain: Choline kinase species: Caenorhabditis elegans [TaxId: 6239]
Probab=94.91 E-value=0.02 Score=51.79 Aligned_cols=39 Identities=18% Similarity=0.168 Sum_probs=28.3
Q ss_pred HHHHHHHHHhcCC-CcCcceeEEEEEeCCeeeEEEecCCCCCHH
Q 014478 31 LNLEEAKAVGNLR-SERLANLIGCCYEADERLLVAEFMPNETLA 73 (424)
Q Consensus 31 ~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~ 73 (424)
...+|..+++.+. +.-.++++++|.+ .+||||++|.+|.
T Consensus 90 dr~~E~~i~~~ls~~gl~Pkll~~~~~----g~I~efi~g~~l~ 129 (395)
T d1nw1a_ 90 HLVAESVIFTLLSERHLGPKLYGIFSG----GRLEEYIPSRPLS 129 (395)
T ss_dssp HHHHHHHHHHHHHHTTSSSCEEEEETT----EEEECCCCEEECC
T ss_pred HHHHHHHHHHHHHhCCCCCeEEEEcCC----ceEEEEeccccCC
Confidence 4557999998884 4445688888753 6899999986543
|
| >d2ppqa1 d.144.1.6 (A:5-320) Homoserine kinase ThrB {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: Homoserine kinase ThrB species: Agrobacterium tumefaciens [TaxId: 358]
Probab=92.71 E-value=0.029 Score=48.93 Aligned_cols=28 Identities=21% Similarity=0.172 Sum_probs=25.2
Q ss_pred cccccCCCCCeeecCCCCeEEccccccc
Q 014478 109 ALYHDLNAYRILFDKDGNPRLSSFGLMK 136 (424)
Q Consensus 109 ivH~dikp~Nill~~~~~~kl~Dfg~~~ 136 (424)
+||+|+.++||+++.+...-|.||+.+.
T Consensus 185 iIHgDl~~dNvl~~~~~v~gvIDF~~~~ 212 (316)
T d2ppqa1 185 VIHADLFQDNVFFLGDELSGLIDFYFAC 212 (316)
T ss_dssp EECSCCCGGGEEEETTEEEEECCCTTCE
T ss_pred cccCCcchhhhhcccccceeEecccccc
Confidence 9999999999999988777899999654
|
| >d1wfda_ a.7.14.1 (A:) Hypothetical protein 1500032H18Rik {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
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class: All alpha proteins fold: Spectrin repeat-like superfamily: MIT domain family: MIT domain domain: Hypothetical protein 1500032H18Rik species: Mouse (Mus musculus) [TaxId: 10090]
Probab=84.22 E-value=0.68 Score=31.67 Aligned_cols=33 Identities=18% Similarity=0.214 Sum_probs=27.2
Q ss_pred HHHHHHHHHHHhHHHhhCCHHHHHHHHHHHhcC
Q 014478 316 MQETLNSKKHGDTAFRAKDFSTAIDCYTQFIDG 348 (424)
Q Consensus 316 ~~~~~~~~~~g~~~~~~g~~~~A~~~~~~ai~~ 348 (424)
...+..+..+|..+-..|+|++|+.+|.+||+.
T Consensus 12 ~~~A~~l~~~Av~~D~~g~y~eA~~~Y~~aie~ 44 (93)
T d1wfda_ 12 STAAVAVLKRAVELDAESRYQQALVCYQEGIDM 44 (93)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 456778888899999999999999999888753
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| >d2crba1 a.7.16.1 (A:8-90) Nuclear receptor binding factor 2, NRBF2, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
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class: All alpha proteins fold: Spectrin repeat-like superfamily: MIT domain-like family: MIT domain domain: Nuclear receptor binding factor 2, NRBF2, N-terminal domain species: Mouse (Mus musculus) [TaxId: 10090]
Probab=83.81 E-value=0.6 Score=30.55 Aligned_cols=23 Identities=26% Similarity=0.212 Sum_probs=11.5
Q ss_pred HHHHHHHHhcCChHHHHHHHHHH
Q 014478 358 ARRCLSYLMNDMPQEALGDAMQA 380 (424)
Q Consensus 358 ~~~~~~~~~~~~~~~A~~~~~~a 380 (424)
..+|..+++.|+|++||++.++|
T Consensus 12 ~RrAer~l~~~rydeAIech~kA 34 (83)
T d2crba1 12 SRRADRLLAAGKYEEAISCHRKA 34 (83)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHH
Confidence 34444445555555555555444
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| >d2crba1 a.7.16.1 (A:8-90) Nuclear receptor binding factor 2, NRBF2, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
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class: All alpha proteins fold: Spectrin repeat-like superfamily: MIT domain-like family: MIT domain domain: Nuclear receptor binding factor 2, NRBF2, N-terminal domain species: Mouse (Mus musculus) [TaxId: 10090]
Probab=82.41 E-value=1.1 Score=29.34 Aligned_cols=29 Identities=17% Similarity=0.344 Sum_probs=23.3
Q ss_pred HHHHHHHHhHHHhhCCHHHHHHHHHHHhc
Q 014478 319 TLNSKKHGDTAFRAKDFSTAIDCYTQFID 347 (424)
Q Consensus 319 ~~~~~~~g~~~~~~g~~~~A~~~~~~ai~ 347 (424)
|=..-.+|..+.+.|+|++||+++.+|..
T Consensus 8 AH~~~RrAer~l~~~rydeAIech~kA~~ 36 (83)
T d2crba1 8 AHQQSRRADRLLAAGKYEEAISCHRKATT 36 (83)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 34455788999999999999999877653
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