Query 014481
Match_columns 423
No_of_seqs 495 out of 2954
Neff 10.6
Searched_HMMs 46136
Date Fri Mar 29 05:34:06 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/014481.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/014481hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG2271 UhpC Sugar phosphate p 100.0 2.8E-34 6E-39 256.8 20.3 288 111-401 26-317 (448)
2 COG2814 AraJ Arabinose efflux 100.0 3.9E-31 8.4E-36 240.0 26.6 264 113-402 12-276 (394)
3 TIGR02332 HpaX 4-hydroxyphenyl 100.0 7E-31 1.5E-35 250.1 26.7 290 111-404 5-311 (412)
4 PRK09556 uhpT sugar phosphate 100.0 8.4E-32 1.8E-36 260.9 19.2 291 112-404 27-326 (467)
5 PRK14995 methyl viologen resis 100.0 7E-30 1.5E-34 248.9 29.9 291 111-404 3-327 (495)
6 TIGR00894 2A0114euk Na(+)-depe 100.0 3.3E-30 7.2E-35 250.0 26.9 293 109-405 14-330 (465)
7 TIGR00893 2A0114 d-galactonate 100.0 2.2E-30 4.8E-35 245.8 23.2 279 123-403 3-282 (399)
8 PRK03545 putative arabinose tr 100.0 1.1E-29 2.4E-34 240.7 27.7 264 112-402 7-271 (390)
9 PRK11663 regulatory protein Uh 100.0 1.4E-29 3.1E-34 243.0 26.5 286 112-402 21-309 (434)
10 PLN00028 nitrate transmembrane 100.0 7.6E-29 1.7E-33 240.1 29.9 277 112-403 34-319 (476)
11 KOG2532 Permease of the major 100.0 5E-29 1.1E-33 236.0 25.7 273 142-418 66-340 (466)
12 PRK10406 alpha-ketoglutarate t 100.0 1.7E-28 3.7E-33 235.5 29.7 269 112-404 20-311 (432)
13 PRK10213 nepI ribonucleoside t 100.0 8.5E-28 1.8E-32 227.6 30.3 261 112-400 18-280 (394)
14 TIGR00710 efflux_Bcr_CflA drug 100.0 4.7E-28 1E-32 229.4 28.5 269 114-404 5-274 (385)
15 PRK15034 nitrate/nitrite trans 100.0 1.5E-28 3.3E-33 231.1 24.8 264 113-405 33-319 (462)
16 COG2223 NarK Nitrate/nitrite t 100.0 6.1E-29 1.3E-33 223.1 20.6 273 112-407 12-289 (417)
17 TIGR01299 synapt_SV2 synaptic 100.0 2.6E-28 5.7E-33 242.6 27.3 186 110-296 163-361 (742)
18 PRK03699 putative transporter; 100.0 6.5E-28 1.4E-32 228.8 28.6 269 111-404 4-273 (394)
19 TIGR00891 2A0112 putative sial 100.0 5.3E-28 1.1E-32 230.5 28.1 292 111-404 9-306 (405)
20 TIGR00903 2A0129 major facilit 100.0 1.7E-28 3.7E-33 229.1 23.7 251 126-403 3-254 (368)
21 TIGR00711 efflux_EmrB drug res 100.0 3.7E-28 8E-33 237.2 26.5 288 114-404 2-323 (485)
22 PRK09705 cynX putative cyanate 100.0 8.3E-28 1.8E-32 227.7 27.1 263 113-404 9-272 (393)
23 TIGR00881 2A0104 phosphoglycer 100.0 1E-28 2.2E-33 233.1 19.9 278 122-402 3-282 (379)
24 PF07690 MFS_1: Major Facilita 100.0 1.1E-28 2.4E-33 230.6 19.7 269 120-403 2-274 (352)
25 PRK10091 MFS transport protein 100.0 9.7E-28 2.1E-32 226.7 25.6 263 115-404 4-267 (382)
26 PRK10642 proline/glycine betai 100.0 2.7E-27 5.8E-32 230.6 29.0 280 113-404 15-318 (490)
27 PRK15402 multidrug efflux syst 100.0 3.8E-27 8.2E-32 224.7 28.7 274 110-404 9-283 (406)
28 PRK15403 multidrug efflux syst 100.0 4.1E-27 8.9E-32 224.2 28.7 261 118-399 20-281 (413)
29 PRK12307 putative sialic acid 100.0 3.3E-27 7.1E-32 226.7 28.2 281 111-404 15-298 (426)
30 TIGR00886 2A0108 nitrite extru 100.0 1.2E-27 2.6E-32 225.0 24.6 275 118-404 5-293 (366)
31 PRK11273 glpT sn-glycerol-3-ph 100.0 1.6E-27 3.4E-32 230.1 25.4 288 112-402 27-319 (452)
32 KOG2533 Permease of the major 100.0 3E-28 6.6E-33 231.0 19.8 285 113-399 44-336 (495)
33 TIGR00890 2A0111 Oxalate/Forma 100.0 2.3E-27 5E-32 223.7 25.6 259 125-404 14-272 (377)
34 PRK11551 putative 3-hydroxyphe 100.0 7.3E-27 1.6E-31 222.8 29.0 272 111-404 12-287 (406)
35 KOG1330 Sugar transporter/spin 100.0 1.7E-29 3.8E-34 228.2 10.1 282 112-405 31-316 (493)
36 TIGR00805 oat sodium-independe 100.0 1.1E-28 2.4E-33 244.7 16.7 286 117-402 36-397 (633)
37 PRK15075 citrate-proton sympor 100.0 9.2E-27 2E-31 223.6 29.5 271 112-404 13-306 (434)
38 TIGR00900 2A0121 H+ Antiporter 100.0 6.3E-27 1.4E-31 219.8 27.1 271 119-404 4-279 (365)
39 TIGR00712 glpT glycerol-3-phos 100.0 4.5E-27 9.7E-32 226.1 24.2 289 112-403 25-318 (438)
40 PRK10133 L-fucose transporter; 100.0 3.2E-26 7E-31 219.2 29.8 274 113-404 25-327 (438)
41 PRK10504 putative transporter; 100.0 3.4E-26 7.5E-31 222.4 30.1 288 114-404 10-329 (471)
42 PRK10473 multidrug efflux syst 100.0 3.3E-26 7.1E-31 217.2 29.2 266 116-404 5-271 (392)
43 PRK11102 bicyclomycin/multidru 100.0 2.3E-26 5E-31 217.2 26.4 257 128-404 5-262 (377)
44 TIGR00897 2A0118 polyol permea 100.0 3.8E-26 8.2E-31 217.2 27.8 273 114-404 13-289 (402)
45 PRK09952 shikimate transporter 100.0 8.8E-26 1.9E-30 216.8 29.1 274 111-404 19-318 (438)
46 PRK11043 putative transporter; 100.0 9.1E-26 2E-30 214.9 28.7 262 117-404 9-270 (401)
47 PRK11652 emrD multidrug resist 100.0 1.3E-25 2.7E-30 213.4 29.4 266 112-401 6-272 (394)
48 TIGR00892 2A0113 monocarboxyla 99.9 5E-26 1.1E-30 219.4 25.0 284 112-399 17-303 (455)
49 TIGR00895 2A0115 benzoate tran 99.9 1.5E-25 3.3E-30 213.0 26.4 289 112-402 15-315 (398)
50 TIGR00879 SP MFS transporter, 99.9 5.3E-26 1.1E-30 221.4 23.8 290 114-404 28-351 (481)
51 PRK10077 xylE D-xylose transpo 99.9 5.6E-26 1.2E-30 221.5 23.5 292 112-404 10-338 (479)
52 TIGR00885 fucP L-fucose:H+ sym 99.9 3.5E-25 7.6E-30 210.2 28.0 268 116-404 5-301 (410)
53 PRK03633 putative MFS family t 99.9 3.3E-25 7.1E-30 209.4 26.8 262 114-404 6-267 (381)
54 PRK11195 lysophospholipid tran 99.9 3.6E-25 7.7E-30 209.6 26.6 266 118-403 7-272 (393)
55 PRK03893 putative sialic acid 99.9 3E-25 6.5E-30 217.3 27.0 293 111-404 17-343 (496)
56 TIGR00899 2A0120 sugar efflux 99.9 5.7E-25 1.2E-29 207.5 27.4 259 121-404 4-267 (375)
57 TIGR00887 2A0109 phosphate:H+ 99.9 1.5E-25 3.2E-30 219.2 23.7 294 111-405 13-368 (502)
58 TIGR00896 CynX cyanate transpo 99.9 2.4E-25 5.1E-30 208.5 21.5 247 129-403 15-263 (355)
59 PRK05122 major facilitator sup 99.9 2.9E-24 6.3E-29 204.4 27.1 259 113-403 14-280 (399)
60 PRK12382 putative transporter; 99.9 7.4E-24 1.6E-28 201.1 27.7 258 115-404 16-281 (392)
61 cd06174 MFS The Major Facilita 99.9 7.9E-24 1.7E-28 197.5 27.3 240 118-403 3-242 (352)
62 PRK10489 enterobactin exporter 99.9 2.3E-24 4.9E-29 206.2 23.3 264 119-402 22-289 (417)
63 TIGR00902 2A0127 phenyl propri 99.9 1E-23 2.2E-28 199.2 26.6 262 119-403 9-271 (382)
64 PRK09874 drug efflux system pr 99.9 5E-23 1.1E-27 196.5 29.8 266 115-404 15-290 (408)
65 PRK11010 ampG muropeptide tran 99.9 2.8E-23 6.1E-28 201.7 27.7 268 116-404 14-291 (491)
66 PRK11128 putative 3-phenylprop 99.9 3.7E-23 7.9E-28 195.5 26.1 256 123-404 13-272 (382)
67 PRK11646 multidrug resistance 99.9 7.8E-23 1.7E-27 194.1 28.1 253 119-398 15-269 (400)
68 TIGR00883 2A0106 metabolite-pr 99.9 1.9E-23 4.1E-28 198.2 23.7 260 124-404 3-287 (394)
69 PRK10054 putative transporter; 99.9 1.6E-23 3.4E-28 198.5 22.8 264 116-404 9-276 (395)
70 KOG2504 Monocarboxylate transp 99.9 1.8E-23 4E-28 200.6 22.1 288 112-402 44-363 (509)
71 TIGR00898 2A0119 cation transp 99.9 1.7E-23 3.6E-28 205.4 22.3 262 135-404 110-387 (505)
72 PRK15011 sugar efflux transpor 99.9 2.2E-22 4.7E-27 190.9 28.5 260 118-404 19-284 (393)
73 PRK11902 ampG muropeptide tran 99.9 1.5E-22 3.3E-27 192.6 27.0 265 119-404 4-278 (402)
74 COG0738 FucP Fucose permease [ 99.9 2.7E-22 5.8E-27 179.3 26.6 271 114-404 13-304 (422)
75 TIGR00901 2A0125 AmpG-related 99.9 1E-22 2.2E-27 190.7 24.7 252 131-404 5-277 (356)
76 PRK06814 acylglycerophosphoeth 99.9 7.2E-23 1.6E-27 219.4 26.0 271 117-403 18-292 (1140)
77 KOG3764 Vesicular amine transp 99.9 2.6E-24 5.6E-29 190.7 10.6 239 142-404 99-338 (464)
78 TIGR00882 2A0105 oligosacchari 99.9 1.3E-21 2.8E-26 185.9 27.2 272 116-404 4-286 (396)
79 PRK08633 2-acyl-glycerophospho 99.9 7.6E-22 1.7E-26 212.1 26.4 272 119-404 14-301 (1146)
80 TIGR00806 rfc RFC reduced fola 99.9 5.4E-21 1.2E-25 176.9 25.3 270 127-399 39-325 (511)
81 PRK10207 dipeptide/tripeptide 99.9 1E-20 2.2E-25 183.0 28.2 288 114-404 14-341 (489)
82 PRK09528 lacY galactoside perm 99.9 2.6E-21 5.6E-26 185.3 23.9 270 118-404 14-294 (420)
83 COG2807 CynX Cyanate permease 99.9 4.2E-21 9.1E-26 169.1 22.7 249 128-404 26-275 (395)
84 KOG0254 Predicted transporter 99.9 3.3E-21 7.2E-26 188.7 22.6 285 119-406 50-363 (513)
85 TIGR00924 yjdL_sub1_fam amino 99.9 3.2E-20 6.9E-25 179.5 28.2 289 114-403 10-343 (475)
86 KOG0569 Permease of the major 99.9 5E-21 1.1E-25 179.6 21.5 254 151-405 62-338 (485)
87 PF05977 MFS_3: Transmembrane 99.9 2.2E-20 4.8E-25 180.3 24.1 272 114-403 10-285 (524)
88 PF06609 TRI12: Fungal trichot 99.9 4.4E-20 9.5E-25 177.6 25.2 282 119-404 49-381 (599)
89 TIGR02718 sider_RhtX_FptX side 99.9 6.8E-20 1.5E-24 173.8 26.4 266 116-404 3-276 (390)
90 KOG2615 Permease of the major 99.8 6.6E-20 1.4E-24 161.9 17.6 251 142-400 61-325 (451)
91 TIGR00889 2A0110 nucleoside tr 99.8 5.6E-19 1.2E-23 168.5 22.7 259 119-404 7-283 (418)
92 KOG0255 Synaptic vesicle trans 99.8 2.7E-19 5.9E-24 176.1 20.3 255 141-403 110-381 (521)
93 TIGR00792 gph sugar (Glycoside 99.8 2.7E-19 5.8E-24 172.4 19.9 258 127-404 12-289 (437)
94 KOG0253 Synaptic vesicle trans 99.8 1.2E-18 2.6E-23 153.1 21.3 188 110-300 74-261 (528)
95 PTZ00207 hypothetical protein; 99.8 2.5E-18 5.5E-23 166.6 22.9 288 112-403 26-422 (591)
96 PRK09584 tppB putative tripept 99.8 1.5E-17 3.3E-22 161.9 26.3 168 116-283 23-194 (500)
97 PRK15462 dipeptide/tripeptide 99.8 7.1E-17 1.5E-21 154.1 28.5 173 114-286 9-185 (493)
98 PF00083 Sugar_tr: Sugar (and 99.8 1.4E-22 3E-27 196.1 -11.6 282 121-406 7-320 (451)
99 KOG2563 Permease of the major 99.8 5.9E-17 1.3E-21 147.0 22.6 283 105-404 36-333 (480)
100 KOG3626 Organic anion transpor 99.8 4.5E-18 9.8E-23 164.8 13.9 289 114-403 97-460 (735)
101 KOG0252 Inorganic phosphate tr 99.8 7.4E-19 1.6E-23 159.0 7.3 294 112-407 39-383 (538)
102 PF03137 OATP: Organic Anion T 99.8 5.6E-20 1.2E-24 178.1 -0.4 289 117-406 6-376 (539)
103 TIGR01301 GPH_sucrose GPH fami 99.8 1E-16 2.2E-21 152.5 21.1 276 113-402 4-335 (477)
104 TIGR00788 fbt folate/biopterin 99.7 1.3E-16 2.8E-21 154.0 18.6 283 114-404 26-320 (468)
105 PRK09669 putative symporter Ya 99.7 4.2E-16 9E-21 150.4 22.1 263 119-404 14-296 (444)
106 KOG4686 Predicted sugar transp 99.7 1.8E-18 3.9E-23 146.7 4.6 273 111-402 41-330 (459)
107 PRK10429 melibiose:sodium symp 99.7 7.3E-16 1.6E-20 149.6 21.6 267 119-404 11-298 (473)
108 PF03825 Nuc_H_symport: Nucleo 99.7 3.5E-15 7.5E-20 140.2 25.0 263 119-403 7-274 (400)
109 PF01306 LacY_symp: LacY proto 99.7 2.3E-15 5E-20 138.9 22.2 273 114-403 7-290 (412)
110 PF13347 MFS_2: MFS/sugar tran 99.7 4.1E-16 9E-21 149.6 18.0 256 128-404 15-292 (428)
111 TIGR01272 gluP glucose/galacto 99.7 2.7E-15 5.9E-20 136.9 19.0 187 199-404 6-210 (310)
112 PRK09848 glucuronide transport 99.7 1.6E-14 3.5E-19 139.6 21.6 264 118-404 12-296 (448)
113 KOG2325 Predicted transporter/ 99.6 1.3E-13 2.8E-18 129.0 26.0 253 112-378 32-304 (488)
114 PRK10642 proline/glycine betai 99.6 2.3E-14 4.9E-19 140.0 21.3 172 126-297 262-437 (490)
115 PRK11462 putative transporter; 99.6 9.7E-14 2.1E-18 134.0 25.1 263 118-404 13-295 (460)
116 COG3104 PTR2 Dipeptide/tripept 99.6 8.3E-14 1.8E-18 128.9 23.1 177 116-292 23-208 (498)
117 TIGR00889 2A0110 nucleoside tr 99.6 6.4E-15 1.4E-19 140.6 15.4 160 133-292 227-405 (418)
118 PF11700 ATG22: Vacuole efflux 99.6 3.7E-13 7.9E-18 129.0 26.2 241 150-403 71-348 (477)
119 PRK15011 sugar efflux transpor 99.6 5E-14 1.1E-18 133.7 19.9 157 133-291 235-392 (393)
120 PRK05122 major facilitator sup 99.6 5.5E-14 1.2E-18 133.9 20.2 160 132-294 234-393 (399)
121 TIGR00880 2_A_01_02 Multidrug 99.6 4.7E-15 1E-19 118.8 10.9 134 155-289 4-137 (141)
122 TIGR01299 synapt_SV2 synaptic 99.6 4.3E-14 9.4E-19 141.5 18.5 140 153-294 599-738 (742)
123 PRK09528 lacY galactoside perm 99.6 1.4E-14 3E-19 138.9 14.0 147 144-291 257-404 (420)
124 TIGR00890 2A0111 Oxalate/Forma 99.6 2.4E-14 5.3E-19 134.9 14.9 150 133-282 224-374 (377)
125 COG2211 MelB Na+/melibiose sym 99.6 5E-13 1.1E-17 124.8 21.5 269 118-405 16-305 (467)
126 PF05631 DUF791: Protein of un 99.6 2.2E-12 4.9E-17 115.4 24.6 247 128-398 48-304 (354)
127 PRK11551 putative 3-hydroxyphe 99.6 1E-13 2.2E-18 132.3 17.1 160 130-290 236-396 (406)
128 cd06174 MFS The Major Facilita 99.6 1.7E-13 3.7E-18 127.7 17.9 165 123-288 184-350 (352)
129 TIGR00899 2A0120 sugar efflux 99.6 2.6E-13 5.7E-18 128.0 19.3 152 136-289 221-373 (375)
130 COG2271 UhpC Sugar phosphate p 99.6 3.2E-14 7E-19 128.6 11.8 179 111-289 249-433 (448)
131 PRK09874 drug efflux system pr 99.6 8.2E-14 1.8E-18 133.0 15.5 158 131-289 236-397 (408)
132 PRK09556 uhpT sugar phosphate 99.6 1.6E-13 3.5E-18 133.2 17.7 174 116-289 260-448 (467)
133 PRK03545 putative arabinose tr 99.6 2.7E-13 5.9E-18 128.6 18.8 153 137-291 229-381 (390)
134 TIGR00902 2A0127 phenyl propri 99.6 2.4E-13 5.3E-18 128.5 18.1 162 121-285 212-374 (382)
135 PRK12382 putative transporter; 99.5 4.3E-13 9.4E-18 127.4 19.4 155 132-289 234-388 (392)
136 PRK03699 putative transporter; 99.5 4E-13 8.7E-18 127.6 18.5 171 121-293 212-383 (394)
137 TIGR00893 2A0114 d-galactonate 99.5 4.4E-13 9.5E-18 127.1 18.2 168 118-287 219-396 (399)
138 PRK03633 putative MFS family t 99.5 6.8E-13 1.5E-17 125.5 18.9 153 133-289 219-371 (381)
139 COG2814 AraJ Arabinose efflux 99.5 9.1E-13 2E-17 120.6 17.6 176 114-291 212-387 (394)
140 PRK09705 cynX putative cyanate 99.5 2.1E-12 4.6E-17 122.5 20.7 162 126-289 217-380 (393)
141 PRK03893 putative sialic acid 99.5 5.5E-13 1.2E-17 130.7 17.1 149 133-281 294-444 (496)
142 PRK11010 ampG muropeptide tran 99.5 5.1E-12 1.1E-16 123.1 23.0 156 137-292 246-405 (491)
143 PRK11273 glpT sn-glycerol-3-ph 99.5 4.4E-13 9.5E-18 129.6 15.6 176 119-294 258-439 (452)
144 TIGR00879 SP MFS transporter, 99.5 7.3E-13 1.6E-17 129.0 17.1 177 113-289 283-469 (481)
145 TIGR00897 2A0118 polyol permea 99.5 1.6E-12 3.5E-17 123.8 19.0 167 121-289 229-400 (402)
146 TIGR00883 2A0106 metabolite-pr 99.5 2.1E-13 4.5E-18 129.4 12.9 162 119-280 224-391 (394)
147 TIGR00892 2A0113 monocarboxyla 99.5 1.6E-13 3.4E-18 132.7 11.9 162 122-284 249-415 (455)
148 PRK11663 regulatory protein Uh 99.5 1.2E-12 2.6E-17 125.9 17.8 172 119-290 248-424 (434)
149 PRK10489 enterobactin exporter 99.5 1.4E-12 3.1E-17 124.9 17.9 160 133-293 242-403 (417)
150 TIGR00891 2A0112 putative sial 99.5 4.3E-13 9.3E-18 127.8 13.5 142 133-274 257-400 (405)
151 PF03209 PUCC: PUCC protein; 99.5 7E-12 1.5E-16 114.0 20.0 241 140-398 6-270 (403)
152 PRK09952 shikimate transporter 99.5 1.9E-12 4E-17 124.7 17.4 163 129-291 265-434 (438)
153 PF11700 ATG22: Vacuole efflux 99.5 7.1E-12 1.5E-16 120.2 19.6 181 113-294 280-472 (477)
154 PRK11128 putative 3-phenylprop 99.4 1.2E-11 2.6E-16 116.9 18.1 150 131-283 222-372 (382)
155 COG2270 Permeases of the major 99.4 2.4E-11 5.2E-16 110.3 18.2 243 148-404 57-320 (438)
156 TIGR00887 2A0109 phosphate:H+ 99.4 1.2E-11 2.6E-16 121.3 17.5 173 122-294 296-493 (502)
157 PRK10504 putative transporter; 99.4 1.1E-11 2.5E-16 120.6 17.2 147 122-268 269-418 (471)
158 PRK12307 putative sialic acid 99.4 2E-11 4.3E-16 117.3 18.4 143 133-275 250-393 (426)
159 PRK10077 xylE D-xylose transpo 99.4 1.3E-11 2.9E-16 120.4 17.4 161 129-289 286-456 (479)
160 TIGR00900 2A0121 H+ Antiporter 99.4 3E-12 6.5E-17 120.1 12.3 133 135-267 232-365 (365)
161 TIGR00881 2A0104 phosphoglycer 99.4 6.6E-12 1.4E-16 118.4 14.5 154 119-272 221-379 (379)
162 PRK15075 citrate-proton sympor 99.4 9.9E-12 2.1E-16 119.6 15.8 145 125-269 249-398 (434)
163 PF05977 MFS_3: Transmembrane 99.4 1.4E-11 3.1E-16 119.4 16.5 158 131-289 235-393 (524)
164 TIGR00882 2A0105 oligosacchari 99.4 1.3E-11 2.8E-16 117.4 15.9 141 145-286 250-391 (396)
165 KOG2816 Predicted transporter 99.4 5.4E-11 1.2E-15 113.0 19.7 279 113-403 21-309 (463)
166 TIGR00712 glpT glycerol-3-phos 99.4 1.1E-11 2.5E-16 119.3 15.0 163 129-291 266-435 (438)
167 PRK10406 alpha-ketoglutarate t 99.3 4.8E-11 1E-15 114.8 18.0 162 128-290 257-424 (432)
168 TIGR00895 2A0115 benzoate tran 99.3 1.4E-11 3.1E-16 116.9 14.0 143 119-262 255-397 (398)
169 TIGR02718 sider_RhtX_FptX side 99.3 3.9E-11 8.5E-16 113.8 16.9 151 135-285 229-386 (390)
170 PRK11902 ampG muropeptide tran 99.3 2.7E-11 5.9E-16 115.4 15.7 151 138-292 234-392 (402)
171 PRK10054 putative transporter; 99.3 3.2E-11 6.9E-16 114.5 15.8 143 142-285 237-379 (395)
172 TIGR01272 gluP glucose/galacto 99.3 8.8E-11 1.9E-15 107.3 18.1 159 116-278 142-303 (310)
173 TIGR00792 gph sugar (Glycoside 99.3 2.3E-11 5.1E-16 117.2 14.5 145 123-268 231-383 (437)
174 KOG0569 Permease of the major 99.3 2.9E-11 6.3E-16 114.2 14.2 189 107-296 263-461 (485)
175 PRK10213 nepI ribonucleoside t 99.3 1.4E-10 3.1E-15 110.0 19.1 144 137-282 240-383 (394)
176 PRK10091 MFS transport protein 99.3 1.4E-10 3.1E-15 109.7 18.9 148 137-286 223-372 (382)
177 COG2270 Permeases of the major 99.3 5.3E-11 1.2E-15 108.1 14.7 177 115-292 253-431 (438)
178 COG2223 NarK Nitrate/nitrite t 99.3 4.2E-11 9E-16 108.8 13.6 173 116-289 220-400 (417)
179 PLN00028 nitrate transmembrane 99.3 2E-11 4.4E-16 118.7 12.5 156 133-291 271-434 (476)
180 PRK15402 multidrug efflux syst 99.3 1.8E-10 3.9E-15 109.9 18.7 152 133-285 234-390 (406)
181 PF06813 Nodulin-like: Nodulin 99.3 1.3E-09 2.9E-14 94.5 22.0 177 113-293 2-185 (250)
182 KOG2504 Monocarboxylate transp 99.3 7.4E-11 1.6E-15 114.0 14.8 176 114-290 298-476 (509)
183 TIGR00898 2A0119 cation transp 99.3 1.1E-10 2.3E-15 114.9 16.0 149 141-294 350-499 (505)
184 PF01306 LacY_symp: LacY proto 99.3 1.1E-10 2.3E-15 108.3 14.9 154 137-291 247-401 (412)
185 TIGR00894 2A0114euk Na(+)-depe 99.3 8.4E-11 1.8E-15 114.3 14.7 176 115-291 262-451 (465)
186 PF03825 Nuc_H_symport: Nucleo 99.3 3E-10 6.5E-15 107.0 17.8 171 119-289 212-394 (400)
187 TIGR02332 HpaX 4-hydroxyphenyl 99.3 9E-11 1.9E-15 112.1 14.5 161 118-279 246-410 (412)
188 KOG4686 Predicted sugar transp 99.3 1.5E-10 3.3E-15 99.0 13.7 149 139-289 290-442 (459)
189 TIGR00926 2A1704 Peptide:H+ sy 99.2 3.5E-09 7.5E-14 105.2 24.2 155 135-289 9-181 (654)
190 PRK11646 multidrug resistance 99.2 2.7E-10 5.9E-15 108.3 15.5 151 134-285 228-383 (400)
191 TIGR00896 CynX cyanate transpo 99.2 6.9E-10 1.5E-14 103.9 17.3 139 127-267 210-350 (355)
192 PF03092 BT1: BT1 family; Int 99.2 4.9E-10 1.1E-14 107.0 16.3 259 134-402 10-285 (433)
193 KOG0253 Synaptic vesicle trans 99.2 1.1E-10 2.3E-15 103.7 9.0 132 157-294 389-523 (528)
194 TIGR00710 efflux_Bcr_CflA drug 99.2 6.9E-10 1.5E-14 105.0 15.4 139 132-272 224-368 (385)
195 TIGR00903 2A0129 major facilit 99.2 1.4E-09 3.1E-14 101.9 17.1 169 117-292 195-367 (368)
196 PRK08633 2-acyl-glycerophospho 99.2 1E-09 2.2E-14 118.7 18.2 147 133-280 251-400 (1146)
197 PRK10133 L-fucose transporter; 99.2 1.2E-09 2.6E-14 105.0 16.6 140 141-284 287-427 (438)
198 PF01770 Folate_carrier: Reduc 99.2 8.6E-09 1.9E-13 95.2 21.2 264 136-401 26-314 (412)
199 PF13347 MFS_2: MFS/sugar tran 99.2 1.3E-09 2.9E-14 104.7 16.6 150 118-268 229-387 (428)
200 PRK15034 nitrate/nitrite trans 99.1 2.6E-09 5.6E-14 101.5 17.5 170 119-289 257-453 (462)
201 PRK11195 lysophospholipid tran 99.1 3.2E-09 6.9E-14 100.8 18.0 148 139-289 231-379 (393)
202 PRK06814 acylglycerophosphoeth 99.1 1E-09 2.3E-14 118.4 15.9 162 120-281 231-413 (1140)
203 PRK14995 methyl viologen resis 99.1 9.4E-10 2E-14 107.7 14.2 136 130-265 275-413 (495)
204 PRK10473 multidrug efflux syst 99.1 3.3E-09 7.1E-14 100.8 16.9 135 140-280 230-364 (392)
205 PRK09848 glucuronide transport 99.1 1.1E-09 2.3E-14 106.0 13.6 149 120-268 234-391 (448)
206 PF07690 MFS_1: Major Facilita 99.1 6.4E-10 1.4E-14 103.7 11.6 135 122-256 214-352 (352)
207 TIGR00711 efflux_EmrB drug res 99.1 8.2E-10 1.8E-14 108.0 12.8 140 127-266 268-411 (485)
208 TIGR00769 AAA ADP/ATP carrier 99.1 2.2E-07 4.8E-12 88.5 27.8 275 114-402 7-333 (472)
209 TIGR00901 2A0125 AmpG-related 99.1 2.3E-09 5E-14 100.4 14.4 124 126-249 221-355 (356)
210 PRK11102 bicyclomycin/multidru 99.1 5.3E-09 1.2E-13 98.7 16.3 129 132-261 212-345 (377)
211 PRK10429 melibiose:sodium symp 99.1 2.2E-09 4.8E-14 104.5 13.7 150 119-268 236-396 (473)
212 KOG0637 Sucrose transporter an 99.0 6.1E-09 1.3E-13 95.5 14.3 282 116-404 34-364 (498)
213 PRK09669 putative symporter Ya 99.0 4.5E-09 9.8E-14 101.5 14.5 121 148-268 263-391 (444)
214 PRK11043 putative transporter; 99.0 1.8E-08 3.8E-13 96.1 18.2 135 134-269 223-361 (401)
215 COG2807 CynX Cyanate permease 99.0 5.4E-08 1.2E-12 87.0 17.6 169 119-289 213-384 (395)
216 KOG3762 Predicted transporter 99.0 4.8E-09 1E-13 97.9 11.3 163 126-289 383-546 (618)
217 TIGR00924 yjdL_sub1_fam amino 99.0 4E-08 8.8E-13 95.4 17.7 173 116-288 274-466 (475)
218 COG0477 ProP Permeases of the 98.9 5E-08 1.1E-12 88.8 16.6 160 122-281 10-176 (338)
219 PF06963 FPN1: Ferroportin1 (F 98.9 1.2E-06 2.6E-11 82.6 25.7 286 116-403 4-324 (432)
220 PF00083 Sugar_tr: Sugar (and 98.9 1.5E-11 3.3E-16 119.0 -10.0 180 114-295 253-442 (451)
221 TIGR00788 fbt folate/biopterin 98.9 1.5E-08 3.3E-13 98.1 10.8 127 141-267 280-415 (468)
222 TIGR00885 fucP L-fucose:H+ sym 98.9 1E-07 2.2E-12 90.8 16.2 144 132-279 250-401 (410)
223 KOG2532 Permease of the major 98.8 1.7E-08 3.8E-13 96.4 10.7 176 114-290 258-447 (466)
224 KOG3764 Vesicular amine transp 98.8 1.2E-08 2.5E-13 92.0 8.8 165 125-290 281-454 (464)
225 PRK11652 emrD multidrug resist 98.8 2E-07 4.4E-12 88.6 18.0 126 140-266 234-361 (394)
226 COG2211 MelB Na+/melibiose sym 98.8 1.2E-07 2.6E-12 89.2 14.3 152 116-267 238-398 (467)
227 TIGR00886 2A0108 nitrite extru 98.8 3.1E-08 6.7E-13 93.1 10.7 120 131-251 242-365 (366)
228 PRK11462 putative transporter; 98.8 2.9E-07 6.2E-12 89.2 16.5 141 128-268 242-390 (460)
229 PF03209 PUCC: PUCC protein; 98.8 4.6E-07 1E-11 83.0 16.6 171 113-286 211-394 (403)
230 KOG3098 Uncharacterized conser 98.8 6.5E-07 1.4E-11 84.3 18.0 237 151-406 51-313 (461)
231 KOG0252 Inorganic phosphate tr 98.8 6.5E-09 1.4E-13 95.3 4.4 181 114-298 304-506 (538)
232 COG0738 FucP Fucose permease [ 98.7 5.2E-07 1.1E-11 82.0 15.3 164 116-283 238-402 (422)
233 PRK09584 tppB putative tripept 98.7 5.8E-07 1.2E-11 88.0 16.9 136 151-286 318-475 (500)
234 PF05978 UNC-93: Ion channel r 98.6 2.3E-06 4.9E-11 68.8 14.7 109 153-263 41-149 (156)
235 KOG3574 Acetyl-CoA transporter 98.6 2.5E-06 5.4E-11 76.7 16.0 261 113-394 30-322 (510)
236 PRK10207 dipeptide/tripeptide 98.6 1.6E-06 3.5E-11 84.4 16.3 138 151-288 311-474 (489)
237 KOG0254 Predicted transporter 98.6 2.2E-06 4.8E-11 84.3 16.3 183 112-295 293-489 (513)
238 PRK15403 multidrug efflux syst 98.6 3.9E-06 8.4E-11 80.3 17.2 156 125-282 229-389 (413)
239 TIGR01301 GPH_sucrose GPH fami 98.5 3.2E-06 6.9E-11 81.1 16.2 178 115-292 259-474 (477)
240 PF03219 TLC: TLC ATP/ADP tran 98.5 0.00025 5.3E-09 68.3 26.5 279 112-402 22-349 (491)
241 PF12832 MFS_1_like: MFS_1 lik 98.4 1.3E-06 2.9E-11 61.1 7.9 71 119-189 5-75 (77)
242 KOG4332 Predicted sugar transp 98.4 2.9E-07 6.4E-12 78.6 5.3 248 128-401 51-311 (454)
243 PF06779 DUF1228: Protein of u 98.4 1.1E-06 2.4E-11 61.9 7.3 78 126-204 4-81 (85)
244 PF06609 TRI12: Fungal trichot 98.4 5.1E-06 1.1E-10 81.2 14.3 181 114-294 310-558 (599)
245 PF02487 CLN3: CLN3 protein; 98.4 0.00012 2.6E-09 68.1 20.9 133 151-290 61-195 (402)
246 PTZ00207 hypothetical protein; 98.3 1.3E-05 2.7E-10 78.9 13.2 171 116-289 355-551 (591)
247 KOG2533 Permease of the major 98.2 6.5E-06 1.4E-10 79.3 9.8 163 115-278 274-444 (495)
248 COG3202 ATP/ADP translocase [E 98.2 0.0021 4.6E-08 60.5 25.7 277 112-401 25-351 (509)
249 KOG2615 Permease of the major 98.2 3.4E-05 7.3E-10 69.8 12.0 133 131-264 278-413 (451)
250 PF12832 MFS_1_like: MFS_1 lik 98.1 1.7E-05 3.6E-10 55.5 7.4 64 340-404 4-67 (77)
251 KOG0255 Synaptic vesicle trans 98.1 3.3E-05 7.3E-10 76.3 11.6 157 137-297 341-500 (521)
252 PRK15462 dipeptide/tripeptide 98.1 0.0003 6.5E-09 68.1 17.6 133 150-282 309-469 (493)
253 KOG2816 Predicted transporter 98.0 0.00021 4.4E-09 68.5 15.2 124 139-264 267-391 (463)
254 PF00854 PTR2: POT family; In 98.0 4.2E-05 9E-10 72.1 10.0 110 180-289 2-122 (372)
255 PF13000 Acatn: Acetyl-coenzym 98.0 0.00035 7.7E-09 65.7 15.4 280 117-401 3-338 (544)
256 PF02487 CLN3: CLN3 protein; 97.8 0.00053 1.2E-08 63.8 14.1 113 147-263 279-395 (402)
257 COG3104 PTR2 Dipeptide/tripept 97.6 0.0018 3.8E-08 61.3 14.2 140 149-288 324-485 (498)
258 KOG1237 H+/oligopeptide sympor 97.6 0.0027 5.9E-08 62.6 15.6 177 112-288 35-243 (571)
259 KOG3810 Micronutrient transpor 97.6 0.0002 4.4E-09 63.9 7.0 239 161-402 54-301 (433)
260 PRK03612 spermidine synthase; 97.6 0.0053 1.1E-07 60.2 17.2 139 140-279 41-186 (521)
261 KOG3097 Predicted membrane pro 97.4 0.025 5.3E-07 50.6 17.9 101 159-261 68-179 (390)
262 KOG2563 Permease of the major 97.4 0.00038 8.2E-09 64.7 6.3 180 116-295 268-455 (480)
263 KOG2325 Predicted transporter/ 97.1 0.002 4.4E-08 61.3 8.4 171 112-282 260-467 (488)
264 PF03092 BT1: BT1 family; Int 97.1 0.0023 5.1E-08 61.4 8.4 149 146-294 252-417 (433)
265 KOG1330 Sugar transporter/spin 97.0 0.0052 1.1E-07 57.5 9.2 126 144-269 278-417 (493)
266 KOG3098 Uncharacterized conser 96.9 0.048 1E-06 52.0 15.1 144 117-261 243-410 (461)
267 PF03137 OATP: Organic Anion T 96.8 0.00028 6.1E-09 69.3 0.0 153 113-265 304-514 (539)
268 TIGR00805 oat sodium-independe 96.8 0.0056 1.2E-07 61.8 9.2 79 115-193 331-413 (633)
269 KOG1479 Nucleoside transporter 96.8 0.025 5.5E-07 52.5 12.3 172 115-292 19-206 (406)
270 TIGR00939 2a57 Equilibrative N 96.8 0.076 1.7E-06 50.9 15.8 52 202-258 105-156 (437)
271 PF06963 FPN1: Ferroportin1 (F 96.7 0.016 3.4E-07 55.2 10.8 141 120-260 264-413 (432)
272 KOG3762 Predicted transporter 96.5 0.0019 4.1E-08 61.5 2.8 71 122-192 19-89 (618)
273 TIGR00939 2a57 Equilibrative N 96.2 0.15 3.2E-06 49.0 14.2 109 152-261 310-430 (437)
274 KOG3880 Predicted small molecu 95.9 0.081 1.8E-06 47.0 9.8 138 151-294 64-203 (409)
275 KOG3626 Organic anion transpor 95.6 0.045 9.7E-07 54.9 8.0 151 115-265 393-649 (735)
276 KOG4830 Predicted sugar transp 95.5 0.0038 8.3E-08 53.6 0.0 65 118-182 21-94 (412)
277 PF01733 Nucleoside_tran: Nucl 95.2 0.0068 1.5E-07 55.4 0.6 107 153-260 186-305 (309)
278 PF01770 Folate_carrier: Reduc 94.5 0.2 4.4E-06 47.1 8.4 99 148-246 284-383 (412)
279 PF05631 DUF791: Protein of un 94.4 0.38 8.1E-06 44.1 9.7 39 366-404 63-101 (354)
280 TIGR00880 2_A_01_02 Multidrug 94.1 0.63 1.4E-05 36.0 9.7 38 245-282 4-41 (141)
281 PF13000 Acatn: Acetyl-coenzym 94.0 0.26 5.6E-06 47.1 8.1 65 205-269 407-471 (544)
282 PF07672 MFS_Mycoplasma: Mycop 93.9 0.067 1.4E-06 46.5 3.7 101 235-349 2-107 (267)
283 KOG4332 Predicted sugar transp 93.8 0.95 2.1E-05 39.7 10.4 133 151-284 284-425 (454)
284 PF06779 DUF1228: Protein of u 93.6 0.25 5.4E-06 35.0 5.6 53 349-402 5-57 (85)
285 TIGR00769 AAA ADP/ATP carrier 93.5 7.8 0.00017 37.7 17.5 74 209-282 272-346 (472)
286 KOG3880 Predicted small molecu 92.0 1.1 2.5E-05 40.1 8.6 65 198-262 337-401 (409)
287 PF07857 DUF1632: CEO family ( 91.9 7.3 0.00016 34.2 13.4 39 342-380 184-226 (254)
288 KOG0637 Sucrose transporter an 91.6 1.3 2.8E-05 42.1 8.9 128 152-280 335-486 (498)
289 KOG1479 Nucleoside transporter 91.3 0.36 7.8E-06 45.1 5.0 109 151-259 284-399 (406)
290 PF03219 TLC: TLC ATP/ADP tran 91.2 16 0.00034 35.8 18.5 75 209-283 288-363 (491)
291 TIGR00806 rfc RFC reduced fola 90.5 4.1 9E-05 39.4 11.4 97 151-248 300-398 (511)
292 PF06912 DUF1275: Protein of u 86.4 20 0.00042 30.5 16.9 51 230-281 153-203 (209)
293 COG4262 Predicted spermidine s 85.7 29 0.00064 32.0 19.5 153 132-286 25-187 (508)
294 COG1230 CzcD Co/Zn/Cd efflux s 85.6 27 0.00059 31.4 13.1 146 116-271 27-187 (296)
295 PF07672 MFS_Mycoplasma: Mycop 84.4 16 0.00035 32.1 10.4 72 152-223 144-224 (267)
296 KOG3574 Acetyl-CoA transporter 84.0 1.9 4E-05 40.0 4.7 63 209-271 375-437 (510)
297 KOG3810 Micronutrient transpor 81.1 23 0.0005 32.8 10.3 130 152-285 274-416 (433)
298 COG5336 Uncharacterized protei 78.1 7.7 0.00017 28.5 5.2 33 159-191 52-85 (116)
299 PF06813 Nodulin-like: Nodulin 75.3 4.9 0.00011 35.3 4.5 49 352-402 18-66 (250)
300 PRK10263 DNA translocase FtsK; 75.3 23 0.0005 38.6 9.9 26 249-274 141-166 (1355)
301 COG3202 ATP/ADP translocase [E 71.7 1E+02 0.0022 30.0 17.8 82 206-287 287-370 (509)
302 TIGR00927 2A1904 K+-dependent 71.6 24 0.00053 37.0 8.7 50 133-184 952-1001(1096)
303 PF12805 FUSC-like: FUSC-like 71.4 26 0.00057 31.5 8.4 33 184-216 4-36 (284)
304 KOG2601 Iron transporter [Inor 71.2 55 0.0012 30.7 10.1 166 116-281 29-217 (503)
305 PRK00293 dipZ thiol:disulfide 70.5 81 0.0018 31.7 12.3 31 370-400 323-353 (571)
306 PRK03612 spermidine synthase; 67.9 1.3E+02 0.0029 29.8 16.3 17 204-220 52-68 (521)
307 KOG1307 K+-dependent Ca2+/Na+ 67.4 50 0.0011 31.5 9.1 41 136-178 446-486 (588)
308 PF05255 UPF0220: Uncharacteri 66.6 70 0.0015 26.1 9.1 61 232-292 15-81 (166)
309 PF02990 EMP70: Endomembrane p 64.4 30 0.00065 34.3 7.8 31 376-406 301-331 (521)
310 PF01733 Nucleoside_tran: Nucl 63.0 2.4 5.2E-05 38.7 0.0 21 376-396 186-206 (309)
311 PF02535 Zip: ZIP Zinc transpo 61.4 1.3E+02 0.0028 27.4 15.3 27 207-233 264-291 (317)
312 PF06638 Strabismus: Strabismu 54.8 1.2E+02 0.0025 29.5 9.4 13 200-212 178-190 (505)
313 PF11151 DUF2929: Protein of u 49.6 70 0.0015 20.7 5.5 45 248-292 11-55 (57)
314 TIGR01666 YCCS hypothetical me 49.4 74 0.0016 32.8 7.9 41 177-217 55-95 (704)
315 COG0477 ProP Permeases of the 49.3 47 0.001 29.1 6.2 52 350-402 16-69 (338)
316 PF11947 DUF3464: Protein of u 48.7 27 0.00058 27.9 3.7 47 205-254 99-145 (153)
317 COG2076 EmrE Membrane transpor 47.6 1.2E+02 0.0025 22.7 10.2 49 168-216 19-67 (106)
318 KOG1237 H+/oligopeptide sympor 47.1 52 0.0011 33.0 6.3 64 202-265 457-520 (571)
319 PTZ00370 STEVOR; Provisional 46.1 34 0.00074 30.3 4.2 40 254-293 243-282 (296)
320 TIGR01667 YCCS_YHJK integral m 45.7 1.4E+02 0.003 31.0 9.1 41 177-217 55-95 (701)
321 PF11299 DUF3100: Protein of u 44.4 29 0.00063 29.8 3.5 93 168-261 126-228 (241)
322 TIGR03173 pbuX xanthine permea 43.4 3E+02 0.0065 26.2 11.5 98 141-239 20-117 (406)
323 PF02990 EMP70: Endomembrane p 43.1 1.6E+02 0.0034 29.3 9.0 78 331-410 253-331 (521)
324 KOG2765 Predicted membrane pro 41.7 1.5E+02 0.0032 27.8 7.6 15 173-187 208-222 (416)
325 TIGR00844 c_cpa1 na(+)/h(+) an 41.5 4.5E+02 0.0097 27.7 19.8 32 248-279 110-141 (810)
326 PF02694 UPF0060: Uncharacteri 40.5 63 0.0014 23.9 4.2 49 148-196 53-101 (107)
327 KOG1277 Endosomal membrane pro 40.3 88 0.0019 29.9 6.1 31 151-181 325-359 (593)
328 PF08566 Pam17: Mitochondrial 40.1 93 0.002 25.4 5.5 10 141-150 69-78 (173)
329 TIGR00926 2A1704 Peptide:H+ sy 40.1 1.1E+02 0.0024 31.4 7.5 54 208-261 570-623 (654)
330 COG1268 BioY Uncharacterized c 40.1 1.2E+02 0.0026 25.2 6.4 23 156-178 89-111 (184)
331 COG3559 TnrB3 Putative exporte 38.8 3.6E+02 0.0078 25.9 14.4 63 336-398 298-370 (536)
332 COG2233 UraA Xanthine/uracil p 37.7 2E+02 0.0043 27.9 8.2 76 118-195 20-95 (451)
333 COG2274 SunT ABC-type bacterio 37.3 5E+02 0.011 27.1 18.5 29 262-290 287-315 (709)
334 TIGR02230 ATPase_gene1 F0F1-AT 36.9 1.7E+02 0.0037 21.6 6.0 29 164-192 57-86 (100)
335 PF12273 RCR: Chitin synthesis 36.7 17 0.00037 28.2 1.0 16 269-284 1-16 (130)
336 PF13073 DUF3937: Protein of u 36.2 78 0.0017 20.7 3.6 38 333-370 2-39 (73)
337 COG3619 Predicted membrane pro 36.1 2.9E+02 0.0062 23.9 19.2 60 228-288 156-216 (226)
338 PRK02237 hypothetical protein; 36.0 1E+02 0.0022 23.0 4.7 48 149-196 56-103 (109)
339 KOG2881 Predicted membrane pro 35.7 3.1E+02 0.0068 24.2 11.7 20 333-352 204-223 (294)
340 PF02632 BioY: BioY family; I 35.6 1.5E+02 0.0033 23.6 6.2 25 156-180 60-84 (148)
341 TIGR03802 Asp_Ala_antiprt aspa 34.8 3.7E+02 0.0079 27.1 10.1 83 150-234 451-533 (562)
342 PF03596 Cad: Cadmium resistan 34.7 2.8E+02 0.006 23.3 8.1 9 356-364 114-122 (191)
343 PF11833 DUF3353: Protein of u 34.3 2.8E+02 0.0061 23.3 8.8 31 234-264 136-166 (194)
344 PF13940 Ldr_toxin: Toxin Ldr, 33.3 75 0.0016 17.8 2.8 20 379-398 15-34 (35)
345 PRK10263 DNA translocase FtsK; 32.0 5.4E+02 0.012 28.9 11.0 21 248-268 61-81 (1355)
346 COG2119 Predicted membrane pro 30.9 3.1E+02 0.0068 22.8 8.9 77 115-193 101-178 (190)
347 PRK13629 threonine/serine tran 30.8 5.1E+02 0.011 25.1 15.1 42 233-279 18-59 (443)
348 COG1457 CodB Purine-cytosine p 30.7 5.1E+02 0.011 25.1 12.7 65 336-402 94-158 (442)
349 COG4769 Predicted membrane pro 30.4 93 0.002 25.2 4.0 53 157-216 81-133 (181)
350 PRK03818 putative transporter; 29.5 4.8E+02 0.01 26.2 9.9 81 150-231 436-516 (552)
351 KOG2601 Iron transporter [Inor 29.0 75 0.0016 29.9 3.8 70 336-405 27-96 (503)
352 TIGR02230 ATPase_gene1 F0F1-AT 28.8 2.4E+02 0.0052 20.8 6.5 23 245-267 49-71 (100)
353 KOG3814 Signaling protein van 28.7 5E+02 0.011 24.4 9.5 13 201-213 203-215 (531)
354 COG5336 Uncharacterized protei 27.8 1.7E+02 0.0038 21.8 4.7 47 235-281 38-86 (116)
355 PF04226 Transgly_assoc: Trans 27.6 1.6E+02 0.0034 18.2 5.0 32 251-282 7-38 (48)
356 KOG1397 Ca2+/H+ antiporter VCX 27.3 1.6E+02 0.0034 27.7 5.4 43 112-154 288-330 (441)
357 PF11368 DUF3169: Protein of u 27.3 4.2E+02 0.0092 23.2 12.5 25 238-262 9-33 (248)
358 PF13440 Polysacc_synt_3: Poly 26.9 4E+02 0.0086 22.7 22.2 32 356-388 202-233 (251)
359 KOG4830 Predicted sugar transp 26.8 81 0.0017 28.0 3.4 117 119-235 206-325 (412)
360 PF07857 DUF1632: CEO family ( 26.8 4.1E+02 0.0088 23.5 7.8 12 145-156 214-225 (254)
361 PF03741 TerC: Integral membra 26.4 3.8E+02 0.0082 22.3 12.3 55 222-278 15-69 (183)
362 PF06826 Asp-Al_Ex: Predicted 26.2 3.7E+02 0.0079 22.0 10.3 81 150-233 57-138 (169)
363 PF11947 DUF3464: Protein of u 25.9 3.5E+02 0.0076 21.7 8.0 35 144-179 92-126 (153)
364 TIGR03644 marine_trans_1 proba 25.7 6E+02 0.013 24.3 11.9 47 212-259 298-344 (404)
365 TIGR00836 amt ammonium transpo 25.2 6.1E+02 0.013 24.3 9.7 48 212-259 284-331 (403)
366 PF13937 DUF4212: Domain of un 25.1 2.5E+02 0.0054 19.8 5.1 35 248-282 22-58 (81)
367 PF05232 BTP: Bacterial Transm 24.9 2.2E+02 0.0048 19.1 5.4 48 132-179 17-64 (67)
368 PF11283 DUF3084: Protein of u 24.2 1.3E+02 0.0027 21.0 3.3 25 386-410 14-38 (79)
369 PRK04972 putative transporter; 24.2 7.5E+02 0.016 24.9 10.5 92 150-243 446-537 (558)
370 PTZ00101 rhomboid-1 protease; 23.6 5.4E+02 0.012 23.1 11.6 35 159-193 118-153 (278)
371 COG2836 Uncharacterized conser 21.5 5.4E+02 0.012 22.3 12.5 33 368-400 160-192 (232)
372 PF07760 DUF1616: Protein of u 21.1 6.1E+02 0.013 22.8 10.3 56 206-262 22-77 (287)
373 PF03773 DUF318: Predicted per 21.1 6.3E+02 0.014 22.9 12.2 22 252-273 94-115 (307)
374 PF02447 GntP_permease: GntP f 20.6 7.9E+02 0.017 23.9 16.2 74 201-279 23-105 (441)
375 PF06123 CreD: Inner membrane 20.6 7.8E+02 0.017 23.8 11.5 74 166-243 308-385 (430)
No 1
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=100.00 E-value=2.8e-34 Score=256.78 Aligned_cols=288 Identities=18% Similarity=0.223 Sum_probs=244.7
Q ss_pred hhHHHHHHHHHHHHHHHhhhhhhhhhHHHhhhhhCCCcchhhHHHHHHHHHHHhhhhhhhhHhhHhcCchHHHHHHHHHH
Q 014481 111 QRYKLIGTTSLAFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWS 190 (423)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~ 190 (423)
.|++++..+++++...++.+..++.+.|.+.++.++|.+|.|++.+++.+.+.++..+.|.++||.++|..+.+++++.+
T Consensus 26 ~r~qif~~~fiGYa~fYl~RknF~~a~p~l~e~~~lsk~~lG~i~s~f~i~YG~sKf~~G~~sDr~npr~fm~~gLilsa 105 (448)
T COG2271 26 WRIQIFLSIFIGYAAFYLTRKNFNLAMPALIEDGGLSKTQLGILGSAFSITYGVSKFVMGVLSDRSNPRYFMAFGLILSA 105 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhHhhccHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCceeehHHHHHHH
Confidence 36778899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhhHHHHHHHHHHHHHhhcccchHhHHHHHHhcCCCCchhhHHHHHHhhhhhHHHHHHhhH--HHhhhccCc
Q 014481 191 LATALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLA--PPIIENLGW 268 (423)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~--~~l~~~~gw 268 (423)
+..++++ ++++.+.+.++.++.|+.+|..+|++...+++|+++++||+..++++++.++|+.+.|++. +++..+.+|
T Consensus 106 i~nil~G-fs~s~~~~~~l~~lng~fQg~Gwpp~~~~i~~Wfsr~eRG~~~siWn~shNiGGal~~~~~~la~~~~~~~w 184 (448)
T COG2271 106 IVNILFG-FSPSLFLFAVLWVLNGWFQGMGWPPCARTITHWFSRKERGTWWSIWNTSHNIGGALAPLVALLAFFAFHGGW 184 (448)
T ss_pred HHHHHHh-hhhHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHcCccccCceEEEehhhhhcccchHHHHHHHHHHHhccch
Confidence 9998885 5668899999999999999999999999999999999999999999999999999999999 889888899
Q ss_pred hHHHHHHHHHHHHHHHHHHhhccCCcCcCCCCCcchhhhhhhhhhhhhHHhhc--cccCCCcHHHhhhcHHHHHHHHHHH
Q 014481 269 ESVFYIFGLLGIAWFSGFKILQEGETSNGATLAPRSNYINMKKSLSASLEEMG--ESLKDVPWKAIFRSKAVWAMIYAHF 346 (423)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~l~~~ 346 (423)
|..|++.++++++..+..++..+++|++..-...++-..+..+.. +.+++. .+..+.-++.+++||.+|.++++.+
T Consensus 185 ~~~f~~pgiiaiival~~~~~~rd~Pqs~GLP~ie~~~~d~~e~~--~~~~~~~~ls~~~i~~~YVL~Nk~iW~la~a~v 262 (448)
T COG2271 185 RAAFYFPGIIAIIVALILLFLLRDRPQSEGLPPIEEYRGDPLEIY--EEEKENEGLTAWQIFVKYVLKNKLIWLLALANV 262 (448)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhCCCccccCCCCHHHhhcCchhhh--hhhccCCCccHHHHHHHHHHcChHHHHHHHHHH
Confidence 999999999998876666655554443322111111100000000 000000 1111223567889999999999999
Q ss_pred HHHHHHHHHHhhhhHHHHHhhCCChhhHHHHHHHHHHHHHHHHHHHHHHhHHhhh
Q 014481 347 CGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIA 401 (423)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~ 401 (423)
+...+-+++..|.|.|+.|..|++...+++..+.+-+++++|.+++||++||+-+
T Consensus 263 fvYivR~gi~dW~p~YL~e~k~~s~~~a~~a~~lfE~agl~G~Ll~GwlSDklfk 317 (448)
T COG2271 263 FVYVVRYGINDWGPLYLSEVKGFSLVKANWAISLFEVAGLPGTLLAGWLSDKLFK 317 (448)
T ss_pred HHHHHHHHHhhhHHHHHHHhcCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcc
Confidence 9999999999999999999999999999999999999999999999999999863
No 2
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=100.00 E-value=3.9e-31 Score=240.05 Aligned_cols=264 Identities=21% Similarity=0.301 Sum_probs=236.4
Q ss_pred HHHHHHHHHHHHHHHhhhhhhhhhHHHhhhhhCCCcchhhHHHHHHHHHHHhhhhhhhhHhhHhcCchHHHHHHHHHHHH
Q 014481 113 YKLIGTTSLAFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLA 192 (423)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~ 192 (423)
+..+..+.++.|............+|++.+|+|+|..+.|+..++|.++..++.++...+.||+.||++++..+.++.++
T Consensus 12 ~~~l~aLa~~~F~igttEfv~~gLLp~iA~dl~vs~~~aG~lis~yAl~~ai~ap~l~~lt~r~~Rr~lLl~~l~lFi~~ 91 (394)
T COG2814 12 WLALLALALAAFAIGTTEFVPVGLLPPIAADLGVSEGAAGQLITAYALGVALGAPLLALLTGRLERRRLLLGLLALFIVS 91 (394)
T ss_pred hHHHHHHHHHHHHHHhHHHHHHhchHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcccchHHHHHHHHHHHHHH
Confidence 46677788888888889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhhHHHHHHHHHHHHHhhcccchHhHHHHHHhcCCCCchhhHHHHHHhhhhhHHHHHHhhHHHhhhccCchHHH
Q 014481 193 TALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVF 272 (423)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~~ 272 (423)
.+++ ++++|++.++++|++.|+..|.+++...++..+..|+++|++++++...+..++.++|.+++.++.+.+|||++|
T Consensus 92 n~l~-alAp~f~~Ll~aR~~~g~a~G~f~~i~~~~a~~lvpp~~~~~Aiaiv~~G~tlA~v~GvPLGt~ig~~~GWR~~F 170 (394)
T COG2814 92 NLLS-ALAPSFAVLLLARALAGLAHGVFWSIAAALAARLVPPGKRGRALALVFTGLTLATVLGVPLGTFLGQLFGWRATF 170 (394)
T ss_pred HHHH-HHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccchhhHHHHHHHHHHHHHHHhccHHHHHHHHhhHHHHH
Confidence 9887 788999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHH-HHhhccCCcCcCCCCCcchhhhhhhhhhhhhHHhhccccCCCcHHHhhhcHHHHHHHHHHHHHHHH
Q 014481 273 YIFGLLGIAWFSG-FKILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWG 351 (423)
Q Consensus 273 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 351 (423)
+..+.++++.++. ...+|++..++..+... .+..+++|+|.++...+..++...+
T Consensus 171 ~~ia~l~ll~~~~~~~~lP~~~~~~~~~~~~------------------------~~~~~~l~~p~v~~~l~~t~l~~~g 226 (394)
T COG2814 171 LAIAVLALLALLLLWKLLPPSEISGSLPGPL------------------------RTLLRLLRRPGVLLGLLATFLFMTG 226 (394)
T ss_pred HHHHHHHHHHHHHHHHhCCCccCCCCCCcch------------------------hHHHHHhcCchHHHHHHHHHHHHcc
Confidence 9999999877554 44555111111110000 0135789999999999999999999
Q ss_pred HHHHHhhhhHHHHHhhCCChhhHHHHHHHHHHHHHHHHHHHHHHhHHhhhc
Q 014481 352 HYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIAT 402 (423)
Q Consensus 352 ~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~r 402 (423)
++..++|+..++++..|++....+++...+++++++|..++|++.|| +.|
T Consensus 227 ~F~~ftYi~P~L~~v~g~s~~~vs~~Ll~~Gv~~~~Gn~~gGrl~dr-~~~ 276 (394)
T COG2814 227 HFALYTYIRPFLESVAGFSVSAVSLVLLAFGIAGFIGNLLGGRLADR-GPR 276 (394)
T ss_pred hhhhHHhHHHHHHHccCCCHhHHHHHHHHHHHHHHHHHHHHhhhccc-cch
Confidence 99999999999999999999999999999999999999999999999 544
No 3
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=100.00 E-value=7e-31 Score=250.07 Aligned_cols=290 Identities=19% Similarity=0.289 Sum_probs=230.8
Q ss_pred hhHHHHHHHHHHHHHHHhhhhhhhhhHHHhhhhhCCCcchhhHHHHHHHHHHHhhhhhhhhHhhHhcCchHHHHHHHHHH
Q 014481 111 QRYKLIGTTSLAFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWS 190 (423)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~ 190 (423)
.+|+.+..+++++++++++....+...|.+.+++|++..++|++.+++.+++.+++++.|++.||+|||+++.++.++++
T Consensus 5 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~ 84 (412)
T TIGR02332 5 LFRRLIIFLFILFIFSFLDRINIGFAGLTMGKDLGLSATMFGLAATLFYAAYVICGIPSNIMLAIIGARRWIAGIMVLWG 84 (412)
T ss_pred ehhHHHHHHHHHHHHHHhhhhhHHHHHHhhHhhcCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhChHHHHHHHHHHHH
Confidence 35788888899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhhHHHHHHHHHHHHHhhcccchHhHHHHHHhcCCCCchhhHHHHHHhhhhhHHHHHHhhHHHhhh------
Q 014481 191 LATALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIE------ 264 (423)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~------ 264 (423)
++.+++ .++++++.+++.|++.|++.+...+....++.|++|+++|++++++++.+..+|.++++++++++.+
T Consensus 85 ~~~~~~-~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~ 163 (412)
T TIGR02332 85 IASTAT-MFATGPESLYLLRILVGIAEAGFLPGILLYLTFWFPAYFRARANALFMIAMPVTMALGLILSGYILALDGLMA 163 (412)
T ss_pred HHHHHH-HHhcCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCC
Confidence 998887 4677889999999999999999999999999999999999999999999999999999999998864
Q ss_pred ccCchHHHHHHHHHHHHHHH-HHHhhccCCcCcCCCCCcchhhhhhhhhhh-h--hHHhhcc--ccC----CCcHHHhhh
Q 014481 265 NLGWESVFYIFGLLGIAWFS-GFKILQEGETSNGATLAPRSNYINMKKSLS-A--SLEEMGE--SLK----DVPWKAIFR 334 (423)
Q Consensus 265 ~~gw~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~--~~~~~~~--~~~----~~~~~~~~~ 334 (423)
..|||+.|++.+++.++..+ ..++++|++.... ...+++++. ..+..+ . ..++..+ ... ...+++++
T Consensus 164 ~~gwr~~f~~~~~~~l~~~~~~~~~~~~~p~~~~-~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 240 (412)
T TIGR02332 164 LKGWQWLFLLEGFPSVILGVMTWFWLDDSPDKAK-WLDEEDKKA-LKEMIDNDQLTLEQPEGAFAHAAMPQRSMLREIF- 240 (412)
T ss_pred ccchhHHHHHHHHHHHHHHHHHhhccCCCcccCC-CCCHHHHHH-HHHHHHhccccccccccccccccccHHHHHHHhc-
Confidence 36999999998888766544 4445555543211 111111100 000000 0 0000000 000 11233433
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHh-hCCChhhHHHHHHHHHHHHHHHHHHHHHHhHHhhhcCC
Q 014481 335 SKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEE-LSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGV 404 (423)
Q Consensus 335 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~-~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~r~~ 404 (423)
++.+|...+..++.....+.+.+|+|.|+++. .|++..+++.+.....++.+++.++.|+++||+++|+.
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~~~~s~~~~~~~~~~~~l~~~~g~l~~g~l~dr~~~r~~ 311 (412)
T TIGR02332 241 TPAIMLYTLAYFCLTNTLSAINIWTPQILQSFNQGSSNIMIGLLAAIPQFCTIFGMIWWSRHSDRLKERKH 311 (412)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHhHHHhhHHHHHHHHHHHHHHHHhcccCccHH
Confidence 58888888888888888999999999999873 46788889999999999999999999999999987643
No 4
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=99.98 E-value=8.4e-32 Score=260.86 Aligned_cols=291 Identities=11% Similarity=0.074 Sum_probs=228.9
Q ss_pred hHHHHHHHHHHHHHHHhhhhhhhhhHHHhhhhhCCCcchhhHHHHHHHHHHHhhhhhhhhHhhHhcCchHHHHHHHHHHH
Q 014481 112 RYKLIGTTSLAFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSL 191 (423)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~ 191 (423)
.+..+..+++++++.++++..++...|.+.+++|++..+.|++.+++.+++.+++++.|+++||+|+|+++.++.+++++
T Consensus 27 ~~~i~~~~~~~~~~~y~~r~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~~~ 106 (467)
T PRK09556 27 FMQSYLVVFIGYLTMYLIRKNFKAAQNDMISTYGLSTTELGMIGLGFSITYGVGKTLVGYYADGKNTKQFLPFLLILSAI 106 (467)
T ss_pred HHHHHHHHHHHHHHHHHHhcChhhhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhhhHhhccCccchHHHHHHHHHH
Confidence 45567788888888999999999999999999999999999999999999999999999999999999999998888877
Q ss_pred HHHHHHHh----hhHHHHHHHHHHHHHhhcccchHhHHHHHHhcCCCCchhhHHHHHHhhhhhHHHHHHhhHHHhhhcc-
Q 014481 192 ATALLPLL----AGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENL- 266 (423)
Q Consensus 192 ~~~~~~~~----~~~~~~~~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~- 266 (423)
..++.+.. +++++.++++|++.|++.+...+...+++++++|+++||+++|++..+.++|.+++++++.++.+..
T Consensus 107 ~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~rg~a~gi~~~~~~lG~~l~~~i~~~~~~~~~ 186 (467)
T PRK09556 107 CMLGFGASLGSGSVSLGLMIALWALSGFFQSTGGPCSYSTITRWTPRRKRGRFLGFWNISHNLGGAGAGGVALWGANYFF 186 (467)
T ss_pred HHHHHHHHHhcccchHHHHHHHHHHHHHHHhccchHHHHHHHHHcCccceeeeEEeeecccchhhhHHHHHHHHHHHhhc
Confidence 77655432 5778999999999999999999999999999999999999999999999999999999988776643
Q ss_pred --CchHHHHHHHHHHHHHHHHHHhhccCCcCcCCCCCcchhhhhhhhhhhhhHHhhccccCCCc--HHHhhhcHHHHHHH
Q 014481 267 --GWESVFYIFGLLGIAWFSGFKILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVP--WKAIFRSKAVWAMI 342 (423)
Q Consensus 267 --gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~ 342 (423)
+|+..|.+.+++.++..+..+++.++.+++......++ ... +...........++..... .+..+++|.+|...
T Consensus 187 ~~~~~~~f~~~g~~~~~~~i~~~~~~~~~p~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 264 (467)
T PRK09556 187 DGHVIGMFIFPSIIALIIGFIGLRYGSDSPEELGWGKAEE-IFG-EPISEEDKETESTDMTKWQIFVEYVLKNPVIWLLC 264 (467)
T ss_pred cCcchhHHHHHHHHHHHHHHHHHHhCCCChhhcCCCChhh-ccc-CccchhhhccccccCcHHHHHHHHHHcChHHHHHH
Confidence 69999988888877665544444332222111111100 000 0000000000000000001 12378999999999
Q ss_pred HHHHHHHHHHHHHHhhhhHHHHHhhCCChhhHHHHHHHHHHHHHHHHHHHHHHhHHhhhcCC
Q 014481 343 YAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGV 404 (423)
Q Consensus 343 l~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~r~~ 404 (423)
+..++......+...|+|.|+++.+|++..++++......++.+++.+++|+++||+++|+.
T Consensus 265 ~~~~~~~~~~~~~~~~~p~yl~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~g~r~~ 326 (467)
T PRK09556 265 FANIFLYIVRIGIDNWSPVYAFQELGFSKEDAINTFTLFEIGALVGSLLWGWLSDLANGRRA 326 (467)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCch
Confidence 99888888888889999999998899999999999999999999999999999999998854
No 5
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=99.98 E-value=7e-30 Score=248.87 Aligned_cols=291 Identities=17% Similarity=0.130 Sum_probs=235.1
Q ss_pred hhHHHHHHHHHHHHHHHhhhhhhhhhHHHhhhhhCCCcchhhHHHHHHHHHHHhhhhhhhhHhhHhcCchHHHHHHHHHH
Q 014481 111 QRYKLIGTTSLAFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWS 190 (423)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~ 190 (423)
++|..+..++++.++..++.++++..+|.+.+++|.+..+.+|+.+.+.++..++.+++|+++||+|||++++++.++.+
T Consensus 3 ~~~~~~~~~~~~~~~~~ld~tiv~~a~p~i~~~l~~s~~~~~~~~~~~~l~~~~~~~~~G~l~D~~Grk~~l~~~~~~~~ 82 (495)
T PRK14995 3 RQWLTLVIIVLVYIPVAIDATVLHVAAPTLSMTLGASGNELLWIIDIYSLVMAGMVLPMGALGDRIGFKRLLMLGGTLFG 82 (495)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHH
Confidence 46788889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhhHHHHHHHHHHHHHhhcccchHhHHHHHHhcC-CCCchhhHHHHHHhhhhhHHHHHHhhHHHhhhccCch
Q 014481 191 LATALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSI-PLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWE 269 (423)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~i~~~~-~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~ 269 (423)
++.+++ ..+++++.++++|+++|+|.+...+.....+.+++ |+++|++++|++.....+|..+||.+++++.++.|||
T Consensus 83 ~~~~~~-~~a~~~~~li~~r~l~G~g~~~~~~~~~~~l~~~~~~~~~r~~~~g~~~~~~~~g~~~gp~lgg~l~~~~gwr 161 (495)
T PRK14995 83 LASLAA-AFSPTASWLIATRALLAIGAAMIVPATLAGIRATFTEEKQRNMALGVWAAVGSGGAAFGPLVGGILLEHFYWG 161 (495)
T ss_pred HHHHHH-HHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCChH
Confidence 999887 56788899999999999999998888888887776 6789999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHH-HHhhccCCcCcCCCCCcchhhhh-----------hhh---hh-hh-----------------h
Q 014481 270 SVFYIFGLLGIAWFSG-FKILQEGETSNGATLAPRSNYIN-----------MKK---SL-SA-----------------S 316 (423)
Q Consensus 270 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-----------~~~---~~-~~-----------------~ 316 (423)
|.|++...+.++.+++ .+++|++++++ .++.+...... ... .. .. .
T Consensus 162 ~~f~i~~~~~~~~~~l~~~~l~~~~~~~-~~~~d~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~f~ 240 (495)
T PRK14995 162 SVFLINVPIVLVVMGLTARYVPRQAGRR-DQPLNLGHALMLIVAILLLVYSAKTALKGFLSLWVTSLTLLTGALLLGLFI 240 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCCCCCC-CCCCChHhHHHHHHHHHHHHHHHHhccccCCchHHHHHHHHHHHHHHHHHH
Confidence 9999988777665443 34445433221 11111100000 000 00 00 0
Q ss_pred HHhhccccCCCcHHHhhhcHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHhhCCChhhHHHHHHHHHHHHHHHHHHHHHHh
Q 014481 317 LEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFA 396 (423)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~ 396 (423)
..+.+...+..+ .+++++|.++...+..++.....++...++|.|+++.+|+++.++++...+..++..++.++.|++.
T Consensus 241 ~~e~~~~~p~~~-~~lf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lq~v~g~s~~~ag~~~~~~~~~~~~~~~~~g~l~ 319 (495)
T PRK14995 241 RTQLAASRPMID-MRLFTHRIILSGVVMAMTAMITLVGFELLMAQELQFVHGLSPLEAGMFMLPVMVASGFSGPIAGILV 319 (495)
T ss_pred HHHhcCCCCCcC-HHHhCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 011111111222 4678999988888888888888888888999999998999999999999999999999999999999
Q ss_pred HHhhhcCC
Q 014481 397 DNLIATGV 404 (423)
Q Consensus 397 dr~~~r~~ 404 (423)
||+++|+.
T Consensus 320 ~r~g~~~~ 327 (495)
T PRK14995 320 SRLGLRLV 327 (495)
T ss_pred HHcCchHH
Confidence 99997643
No 6
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=99.97 E-value=3.3e-30 Score=249.98 Aligned_cols=293 Identities=27% Similarity=0.437 Sum_probs=239.9
Q ss_pred CchhHHHHHHHHHHHHHHHhhhhhhhhhHHHhhh----------------------hhCCCcchhhHHHHHHHHHHHhhh
Q 014481 109 IPQRYKLIGTTSLAFVICNMDKVNLSVAIIPMSH----------------------RFGWNSSVAGLVQSSFFWGYALSQ 166 (423)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------------~~~~s~~~~~~~~~~~~~~~~~~~ 166 (423)
.+.|+.+...++++..+++.++...+...+.+.+ +++++..+.|++.+.+.+++.+++
T Consensus 14 ~~~r~~i~~~~~~~~~~~y~dr~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~ 93 (465)
T TIGR00894 14 CSFRLFLSFLLHICNVIIIAQRICLSLTMVAMVNKENSTDLACLSAENELDNIKNPNFKWSGALQGLILSSHFYGQIIIQ 93 (465)
T ss_pred cCcHHHHHHHHHHHHHHHHHHHhhheEEEEEcccCCCCCCccccccccccccccCCCCCCCHHHhhHHHHHHHHHHHHHH
Confidence 3446788888888888899999999988887766 789999999999999999999999
Q ss_pred hhhhhHhhHhcCchHHHHHHHHHHHHHHHHHHh-hhHHHHHHHHHHHHHhhcccchHhHHHHHHhcCCCCchhhHHHHHH
Q 014481 167 LPGGWLAKIFGGRKVLQTGVLIWSLATALLPLL-AGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVF 245 (423)
Q Consensus 167 ~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~ 245 (423)
++.|+++||+|+|+++.++.++++++.+++... ..+++.+++.|+++|++.+...+....++.+++|+++|++++++..
T Consensus 94 ~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~ 173 (465)
T TIGR00894 94 IPVGYLAGKYVFKWSIGIGMFLSSVISIVIPWAAGGGIALVVFCRVIQGLAQGSVSPATHKIIVKWAPPKERSRLLGMST 173 (465)
T ss_pred cchHHHHHHhCcchhhHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHhcccchhhHHHHHHhcCCHHHHHHHHHHHH
Confidence 999999999999999999999888887665322 3456789999999999999999999999999999999999999999
Q ss_pred hhhhhHHHHHHhhHHHhhhc-cCchHHHHHHHHHHHHHHHHHHhhccCCcCcCCCCCcchhhhhhhhhhhhhHHhhcccc
Q 014481 246 GGLSFGSVAGLLLAPPIIEN-LGWESVFYIFGLLGIAWFSGFKILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESL 324 (423)
Q Consensus 246 ~~~~~g~~~g~~~~~~l~~~-~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (423)
.+..+|.++++++++.+.+. .|||+.|++.+++.++..+..+.++++.++......++++. ...+.. .++..+..
T Consensus 174 ~~~~~g~~i~~~l~~~l~~~~~gw~~~f~i~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~-~i~~~~---~~~~~~~~ 249 (465)
T TIGR00894 174 SGFQLGTFIFLPISGWLCESWGGWPMIFYVFGIVGCAWSLLWFVFPADDPSIHPCISKFEKK-YINSSL---QGQKGSTR 249 (465)
T ss_pred HHHHHHHHHHHHHHHHHHhccCCCCeehhhhhHHHHHHHHHHHHHhcCCcccCCCCCHHHHH-HHHhhc---ccccCCCC
Confidence 99999999999999999988 49999999999988777666655554433222111111110 000000 00011112
Q ss_pred CCCcHHHhhhcHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHhhCCChhhHHHHHHHHHHHHHHHHHHHHHHhHHhhhcCC
Q 014481 325 KDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGV 404 (423)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~r~~ 404 (423)
...+++++++++.+|...+..++.....+.+.+|+|.|+++.+|++..+++++.++..++.+++.++.|+++||+++|+.
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~d~~~~~~~ 329 (465)
T TIGR00894 250 QSLPIKAIPKSLPVWAIWFAIFGHFWLYTILPTYLPTFISWVLRVSGKENGLLSSLPYLFAWLCSIFAGYLADFLKSSKT 329 (465)
T ss_pred CCCCHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcChHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 23468999999999999999999999999999999999999899999999999999999999999999999999987755
Q ss_pred c
Q 014481 405 E 405 (423)
Q Consensus 405 ~ 405 (423)
.
T Consensus 330 ~ 330 (465)
T TIGR00894 330 L 330 (465)
T ss_pred C
Confidence 3
No 7
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.97 E-value=2.2e-30 Score=245.83 Aligned_cols=279 Identities=29% Similarity=0.493 Sum_probs=227.6
Q ss_pred HHHHHhhhhhhhhhHHHhhhhhCCCcchhhHHHHHHHHHHHhhhhhhhhHhhHhcCchHHHHHHHHHHHHHHHHHHhhhH
Q 014481 123 FVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPLLAGF 202 (423)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~~~ 202 (423)
+++.+++...++...|.+.+++|.+..+.+++.+++.++..++.++.|+++||+|||+++.++.++.+++..++ ...++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~-~~~~~ 81 (399)
T TIGR00893 3 TVINYLDRANLSFAAPMLQEDLGLSAAQYGYVFSAFSWGYVVGQFPGGWLLDRFGARKTLAVFIVIWGVFTGLQ-AFAGA 81 (399)
T ss_pred ehHHHHHHHhhhHhHHHHHHhhCCChhhHHHHHHHHHHHHHHHHHhHHHHHHhcCcceeeHHHHHHHHHHHHHH-HHHcC
Confidence 44667788888899999999999999999999999999999999999999999999999999999988888777 45667
Q ss_pred HHHHHHHHHHHHhhcccchHhHHHHHHhcCCCCchhhHHHHHHhhhhhHHHHHHhhHHHhhhccCchHHHHHHHHHHHHH
Q 014481 203 MPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAW 282 (423)
Q Consensus 203 ~~~~~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~~~~~~~~~~~~ 282 (423)
++.++++|++.|++.+...+....++.|++|+++|++++++.+....+|.++++.+++.+.+..+||+.|++.+++.++.
T Consensus 82 ~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 161 (399)
T TIGR00893 82 YVSLYILRVLLGAAEAPFFPGIILIVASWFPASERATAVSIFNSAQGLGGIIGGPLVGWILIHFSWQWAFIIEGVLGIIW 161 (399)
T ss_pred HHHHHHHHHHHHHHHHhhhhHHHHHHHHhCCHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHH
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999988887766
Q ss_pred HHHHHhh-ccCCcCcCCCCCcchhhhhhhhhhhhhHHhhccccCCCcHHHhhhcHHHHHHHHHHHHHHHHHHHHHhhhhH
Q 014481 283 FSGFKIL-QEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLSWLPT 361 (423)
Q Consensus 283 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 361 (423)
.+..++. +++++++ ....++++.........+...+..+......+++.+++|.++...+..++..........++|.
T Consensus 162 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (399)
T TIGR00893 162 GVLWLKFIPDPPQKA-KWLTEEEKYIVVGGLLAEQQGKGPSTPKKYQIKELLKDRRVWGLALGQFLVNIGLGFFLTWFPT 240 (399)
T ss_pred HHHhhheecCCCCcc-ccCCHHHHhhcchhhccccccccccCCCccchHHHhcCHHHHHHHHHHHHHHhHHHHHHHHHHH
Confidence 5554443 3333221 1111111110000000000011111223345678899999999999999999999999999999
Q ss_pred HHHHhhCCChhhHHHHHHHHHHHHHHHHHHHHHHhHHhhhcC
Q 014481 362 YFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATG 403 (423)
Q Consensus 362 ~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~r~ 403 (423)
|+++.+|.++.+++++.....++++++.++.|++.||+++|+
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 282 (399)
T TIGR00893 241 YLVQERGLSILEAGFMASLPGIVGFIGMILGGRLSDLLLRRG 282 (399)
T ss_pred HHHHHhcccHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 999888999999999999999999999999999999999886
No 8
>PRK03545 putative arabinose transporter; Provisional
Probab=99.97 E-value=1.1e-29 Score=240.69 Aligned_cols=264 Identities=19% Similarity=0.229 Sum_probs=217.2
Q ss_pred hHHHHHHHHHHHHHHHhhhhhhhhhHHHhhhhhCCCcchhhHHHHHHHHHHHhhhhhhhhHhhHhcCchHHHHHHHHHHH
Q 014481 112 RYKLIGTTSLAFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSL 191 (423)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~ 191 (423)
+|..+..+.++.+..........+.+|.+.+++|.++.++|++.+.+.+++.+++++.|++.||+|||+++..+.++.++
T Consensus 7 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~ 86 (390)
T PRK03545 7 AWLRVVTLALAAFIFNTTEFVPVGLLSDIAQSFHMQTAQVGLMLTIYAWVVALMSLPLMLLTSNVERRKLLIGLFVLFIA 86 (390)
T ss_pred chHHHHHHHHHHHHHHhHHHHHHcchHHHHhHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHH
Confidence 44444555555444444444566678999999999999999999999999999999999999999999999999999998
Q ss_pred HHHHHHHhhhHHHHHHHHHHHHHhhcccchHhHHHHHHhcCCCCchhhHHHHHHhhhhhHHHHHHhhHHHhhhccCchHH
Q 014481 192 ATALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESV 271 (423)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~ 271 (423)
+.+++ ...++++.++++|+++|++.+...+...+++.+++|+++|++++|++..+.++|..+||++++.+.+..|||+.
T Consensus 87 ~~~~~-~~~~~~~~l~~~r~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~g~~~~~~~~g~~ig~~l~~~l~~~~gw~~~ 165 (390)
T PRK03545 87 SHVLS-ALAWNFTVLLISRIGIAFAHAIFWSITASLAIRVAPAGKKAQALSLLATGTALAMVLGLPLGRVIGQYLGWRTT 165 (390)
T ss_pred HHHHH-HHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhhhhhHHHHHHHHHHHHHHHHhhHHHHHHHHhcHHHH
Confidence 88777 56788899999999999999888899999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHh-hccCCcCcCCCCCcchhhhhhhhhhhhhHHhhccccCCCcHHHhhhcHHHHHHHHHHHHHHH
Q 014481 272 FYIFGLLGIAWFSGFKI-LQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSW 350 (423)
Q Consensus 272 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 350 (423)
|++.+++.++..+..+. +|++++++ + .. ..++++++++|.++...+..++...
T Consensus 166 f~~~~~~~~l~~~~~~~~~~~~~~~~-----~-~~--------------------~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (390)
T PRK03545 166 FLAIGGGALITLLLLIKLLPLLPSEH-----S-GS--------------------LKSLPLLFRRPALVSLYLLTVVVVT 219 (390)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCCCCC-----c-ch--------------------HHHHHHHHhCcHHHHHHHHHHHHHH
Confidence 99998887666444333 33322110 0 00 0014578899988877666666666
Q ss_pred HHHHHHhhhhHHHHHhhCCChhhHHHHHHHHHHHHHHHHHHHHHHhHHhhhc
Q 014481 351 GHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIAT 402 (423)
Q Consensus 351 ~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~r 402 (423)
..+....+++.|+++.+|++..+++.+.....+++++++++.|++.||+++|
T Consensus 220 ~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~ 271 (390)
T PRK03545 220 AHFTAYSYIEPFVQQVAGLSENFATLLLLLFGGAGIIGSVLFSRLGNRHPSG 271 (390)
T ss_pred HHHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHHHHHHHHHHHHHhhccchh
Confidence 6666677888888887899999999999999999999999999999999866
No 9
>PRK11663 regulatory protein UhpC; Provisional
Probab=99.97 E-value=1.4e-29 Score=242.96 Aligned_cols=286 Identities=17% Similarity=0.185 Sum_probs=226.3
Q ss_pred hHHHHHHHHHHHHHHHhhhhhhhhhHHHhhhhhCCCcchhhHHHHHHHHHHHhhhhhhhhHhhHhcCchHHHHHHHHHHH
Q 014481 112 RYKLIGTTSLAFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSL 191 (423)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~ 191 (423)
++..+...++.++..+++...++..+|.+.+++|++..+.|++.+.+.+++.+++++.|+++||+|||+++.++.++.++
T Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~r~~~~~~~~~~~~ 100 (434)
T PRK11663 21 RRHILITMYLGYALFYFTRKSFNAAMPEMLADLGLSRSDIGLLATLFYITYGVSKFVSGIVSDRSNARYFMGIGLIATGI 100 (434)
T ss_pred HHHHHHHHHHHHHHHHHhhhhHHHhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhhHHHhhcCCchhHHHHHHHHHH
Confidence 44566667777888888888889999999999999999999999999999999999999999999999999999999998
Q ss_pred HHHHHHHhhhHHHHHHHHHHHHHhhcccchHhHHHHHHhcCCCCchhhHHHHHHhhhhhHHHHHHhhHHHhhhccCchHH
Q 014481 192 ATALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESV 271 (423)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~ 271 (423)
+.+++ ...++++.+++.|++.|++.+...+...+++.+++|+++|++++++++.+..+|..++|.+++++.+.+|||+.
T Consensus 101 ~~~~~-~~~~~~~~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~gw~~~ 179 (434)
T PRK11663 101 INILF-GFSSSLWAFALLWVLNAFFQGWGWPVCAKLLTAWYSRTERGGWWAIWNTAHNVGGALIPLVVGAIALHYGWRYG 179 (434)
T ss_pred HHHHH-HHHhHHHHHHHHHHHHHHHHHccchHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHH
Confidence 88776 45677888999999999999988999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHH-HHHHhhccCCcCcCCCCCcchhhhhhhhhhhhhHHhhccccCCCc-H-HHhhhcHHHHHHHHHHHHH
Q 014481 272 FYIFGLLGIAWF-SGFKILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVP-W-KAIFRSKAVWAMIYAHFCG 348 (423)
Q Consensus 272 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~l~~~~~ 348 (423)
|++.+++.++.. +..+++++++.........+.+... .+.. .+...+..+... + ...++++.+|.+.+..++.
T Consensus 180 f~~~~i~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~-~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (434)
T PRK11663 180 MMIAGIIAIVVGLFLCWRLRDKPQAMGLPSVGEWRHDA-LELA---QQQEGAGLSRKEILTKYVLLNPYIWLLSFSYVLV 255 (434)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCHhhcCCCCcccccccc-cccc---hhccccCCChhhhHHHHHhcChHHHHHHHHHHHH
Confidence 999888766543 3344555543321111000000000 0000 000000000001 1 2366789999888888887
Q ss_pred HHHHHHHHhhhhHHHHHhhCCChhhHHHHHHHHHHHHHHHHHHHHHHhHHhhhc
Q 014481 349 SWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIAT 402 (423)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~r 402 (423)
...+..+..|+|.|+.+.+|++..+++...+...+++++++++.|++.||+.++
T Consensus 256 ~~~~~~~~~~~p~~l~~~~g~s~~~a~~~~~~~~~~~~~g~~~~g~l~dr~~~~ 309 (434)
T PRK11663 256 YVVRAAINDWGNLYMSETLGVDLVTANSAVSMFELGGFIGALVAGWGSDKLFNG 309 (434)
T ss_pred HHHHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHHHhhhHHHhccC
Confidence 778888889999999877899999999999999999999999999999999533
No 10
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=99.97 E-value=7.6e-29 Score=240.13 Aligned_cols=277 Identities=14% Similarity=0.121 Sum_probs=214.2
Q ss_pred hHHHHHHHHHHHHHHHhhhhhhhhhHHHhhhhhCCCcchhhHHHHHHHHHHHhhhhhhhhHhhHhcCchHHHHHHHHHHH
Q 014481 112 RYKLIGTTSLAFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSL 191 (423)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~ 191 (423)
+++.+....+..+..........+..|.+.+++|++..+.+++.+.+.+++.+++++.|+++||+|||+++.++.+++++
T Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gls~~~~g~~~~~~~~~~~~~~~~~G~l~dr~G~r~~~~~~~~~~~~ 113 (476)
T PLN00028 34 HMRAFHLSWISFFTCFVSTFAAAPLLPIIRDNLNLTKSDIGNAGIASVSGSIFSRLAMGPVCDLYGPRYGSAFLLMLTAP 113 (476)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHH
Confidence 34455555566666667777788889999999999999999999999999999999999999999999999999988888
Q ss_pred HHHHHHHhhhHHHHHHHHHHHHHhhcccchHhHHHHHHhcCCCCchhhHHHHHHhhhhhHHHHHHhhHHHhhh-------
Q 014481 192 ATALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIE------- 264 (423)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~------- 264 (423)
+.++. ...++++.++++|++.|++.+.. .....++++++|+++|++++|+.....++|..+++.+.+.+..
T Consensus 114 ~~~~~-~~~~s~~~l~~~r~l~G~~~~~~-~~~~~~i~~~~~~~~rg~a~g~~~~~~~~g~~~~~~~~~~i~~~~~~~~~ 191 (476)
T PLN00028 114 AVFCM-SLVSSATGFIAVRFFIGFSLATF-VSCQYWMSTMFNGKIVGTANGIAAGWGNLGGGVTQLLMPLVFPLIKDAGA 191 (476)
T ss_pred HHHHH-HHhcCHHHHHHHHHHHHHHHHhh-HHHHHHHHHhcChhheeHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 87766 45667788889999999998765 3456788999999999999999988777787777666654432
Q ss_pred --ccCchHHHHHHHHHHHHHHHHHHhhccCCcCcCCCCCcchhhhhhhhhhhhhHHhhccccCCCcHHHhhhcHHHHHHH
Q 014481 265 --NLGWESVFYIFGLLGIAWFSGFKILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMI 342 (423)
Q Consensus 265 --~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (423)
..|||+.|++.+++.++..+..++++++.+....+ +.++. . +..+......+++.++++.+|.+.
T Consensus 192 ~~~~gWr~~f~i~g~l~l~~~l~~~~~~~~~p~~~~~--~~~~~----~-------~~~~~~~~~~~~~~~~~~~~~~~~ 258 (476)
T PLN00028 192 PSFTAWRIAFFVPGLLHIIMGILVLTLGQDLPDGNYR--ELKKS----G-------TMPKDSFSKVLRYGVTNYRTWILA 258 (476)
T ss_pred cchhhhHHHHHHHHHHHHHHHHHHHHHcCcCCCCchh--hHHhc----C-------ccccccHHHHHHHHHcCchhHHHH
Confidence 24899999999998877766666665543321100 00000 0 000000011246678889988888
Q ss_pred HHHHHHHHHHHHHHhhhhHHHHHhhCCChhhHHHHHHHHHHHHHHHHHHHHHHhHHhhhcC
Q 014481 343 YAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATG 403 (423)
Q Consensus 343 l~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~r~ 403 (423)
+..++.......+..++|.|+.+.+|++..+++.+.++.+++++++++++|+++||+++|+
T Consensus 259 ~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~~~r~ 319 (476)
T PLN00028 259 LTYGYSFGVELTMDNIIAEYFYDRFGLSLETAGAIAASFGLMNLFARPAGGYLSDVAARRF 319 (476)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHhc
Confidence 7777766666777889999998888999999999999999999999999999999999874
No 11
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.97 E-value=5e-29 Score=235.96 Aligned_cols=273 Identities=35% Similarity=0.617 Sum_probs=232.9
Q ss_pred hhhCCCcchhhHHHHHHHHHHHhhhhhhhhHhhHhcCchHHHHHHHHHHHHHHHHHHhhh-HHHHHHHHHHHHHhhcccc
Q 014481 142 HRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPLLAG-FMPGLVLSRVLVGIGEGVS 220 (423)
Q Consensus 142 ~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~G~~~~~~ 220 (423)
.++++++.+-+++.+.+..|+.+++++.|+++||+|.|+++.++.++.++++++.....+ +++.++++|+++|++.|..
T Consensus 66 ~~~~ws~~~k~~i~ss~~~G~i~~~iP~g~l~~k~G~r~v~~~~~~~sa~~t~l~P~aa~~~~~~~~~~R~lqGl~~g~~ 145 (466)
T KOG2532|consen 66 GEYDWSSTEKGLIFSSFFWGYILGQIPGGYLADKFGARRVFFISGLISALLTLLTPLAASIGFYLLLVLRFLQGLGQGVL 145 (466)
T ss_pred ceecCCHHHHHHHHHHHHHHHHHHHcCcHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHhHHHHhHH
Confidence 468889999999999999999999999999999999999999999999999988876553 3457899999999999999
Q ss_pred hHhHHHHHHhcCCCCchhhHHHHHHhhhhhHHHHHHhhHHHhhhc-cCchHHHHHHHHHHHHHHHHHHhhccCCcCcCCC
Q 014481 221 PSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIEN-LGWESVFYIFGLLGIAWFSGFKILQEGETSNGAT 299 (423)
Q Consensus 221 ~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~-~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (423)
+|+...+.+.|.|++||++..++...+..+|.+++-+++|.+.+. .||+++|++.++++++..++++++..+.+.+.+.
T Consensus 146 ~pa~~~i~~~W~P~~Ers~~~ail~~g~q~g~v~~mp~sg~lc~s~~GW~sifY~~g~~g~i~~~~w~~~~~d~P~~h~~ 225 (466)
T KOG2532|consen 146 FPAIGSILAKWAPPNERSTFIAILTAGSQLGTIITMPVSGLLCESSLGWPSIFYVFGIVGLIWFILWFLFYSDSPSKHPN 225 (466)
T ss_pred HhhhhceeeeECCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccCCCCchHHHHHHHHHHHHHHHHHHHhcCCcccCCC
Confidence 999999999999999999999999999999999999999999998 9999999999999999888877776655554443
Q ss_pred CCcchhhhhhhhhhhhhHHhhccccCCCcHHHhhhcHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHhhCCChhhHHHHHH
Q 014481 300 LAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSI 379 (423)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~ 379 (423)
..++|.+...+. ..++..+.....||+++++++.+|...+..++..++.+.+..+.|.|+.+.+|++..+.|++.+
T Consensus 226 is~~El~~I~~~----k~~~~~~~~~~vP~~~i~ts~~vwai~~~~f~~~~~~~~l~~y~PtY~~~VL~f~v~~~G~~sa 301 (466)
T KOG2532|consen 226 ISEKELKYIEKG----KSEAHVKKKPPVPYKAILTSPPVWAIWISAFGGNWGFYLLLTYLPTYLKEVLGFDVRETGFLSA 301 (466)
T ss_pred CCHHHHHHHHhc----ccccccCCCCCCCHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCCChhhhhHHHH
Confidence 333322111111 0111111225789999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhHHhhhcCCccceeeheeeehhh
Q 014481 380 LPPLASVLVTSIAAQFADNLIATGVETTMVRKEAVHSCV 418 (423)
Q Consensus 380 ~~~~~~~~~~~~~g~l~dr~~~r~~~~~~~~~~~~~~~~ 418 (423)
+..+...+..+++|.++||+.+|....+..++++..++.
T Consensus 302 lP~l~~~~~k~~~g~lsD~l~~~~ls~t~~rkifn~i~~ 340 (466)
T KOG2532|consen 302 LPFLAMAIVKFVAGQLSDRLTFRILSETTVRKIFNTIAF 340 (466)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhccCchHhHHHHHHhHHH
Confidence 999999999999999999998875666666666655543
No 12
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=99.97 E-value=1.7e-28 Score=235.48 Aligned_cols=269 Identities=15% Similarity=0.181 Sum_probs=208.1
Q ss_pred hHHHHHHHHHHHHHHHhhhhhhhhhHHHhhhhhC---CCcchhhHHH---HHHHHHHHhhhhhhhhHhhHhcCchHHHHH
Q 014481 112 RYKLIGTTSLAFVICNMDKVNLSVAIIPMSHRFG---WNSSVAGLVQ---SSFFWGYALSQLPGGWLAKIFGGRKVLQTG 185 (423)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~s~~~~~~~~---~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~ 185 (423)
++..+...+++.++.+++...++...|.+.++++ .+..+.+... +...++..++++++|+++||+|||+++.++
T Consensus 20 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~~~G~l~Dr~Grr~~l~~~ 99 (432)
T PRK10406 20 RIWAIVGASSGNLVEWFDFYVYSFCSLYFAHIFFPSGNTTTQLLQTAGVFAAGFLMRPIGGWLFGRIADKHGRKKSMLIS 99 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHH
Confidence 4455666778888999999999999999999985 4555444444 444555559999999999999999999999
Q ss_pred HHHHHHHHHHHHHhhhHH--------HHHHHHHHHHHhhcccchHhHHHHHHhcCCCCchhhHHHHHHhhhhhHHHHHHh
Q 014481 186 VLIWSLATALLPLLAGFM--------PGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLL 257 (423)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~--------~~~~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~ 257 (423)
.++++++.++++ +.+++ ..++++|+++|++.|..++...++++|++|+++|+++.++...+...|.++++.
T Consensus 100 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~R~l~G~g~g~~~~~~~~~i~e~~p~~~rg~~~~~~~~~~~~G~~~~~~ 178 (432)
T PRK10406 100 VCMMCFGSLVIA-CLPGYETIGTWAPALLLLARLFQGLSVGGEYGTSATYMSEVAVEGRKGFYASFQYVTLIGGQLLALL 178 (432)
T ss_pred HHHHHHHHHHHh-hcCCchhHHHHHHHHHHHHHHHHHhhhhhhHhhHHHHHHHhCCCCcccHHHHHHHHHHHHHHHHHHH
Confidence 999999988874 33432 368899999999999999999999999999999999999998888888888887
Q ss_pred hHHHhh--------hccCchHHHHHHHHHHHHHHHHHHhhccCCcCcCCCCCcchhhhhhhhhhhhhHHhhccccCCCcH
Q 014481 258 LAPPII--------ENLGWESVFYIFGLLGIAWFSGFKILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPW 329 (423)
Q Consensus 258 ~~~~l~--------~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 329 (423)
+...+. ..+|||++|++.+++.++.......++|+++.+. + +. .+..++
T Consensus 179 ~~~~~~~~~~~~~~~~~gWr~~F~i~~~~~ll~~~~~~~~~e~~~~~~------~--------------~~---~~~~~~ 235 (432)
T PRK10406 179 VVVVLQQTLEDAELREWGWRIPFALGAVLAVVALWLRRQLDETSQQET------R--------------AL---KEAGSL 235 (432)
T ss_pred HHHHHHHhCCHHHHhccchHHHHHHHHHHHHHHHHHHhcCCCCchHHH------h--------------hh---cccccH
Confidence 765543 2579999999887777655433333333221100 0 00 011246
Q ss_pred HHhhhcHHHHHHHHHHHH-HHHHHHHHHhhhhHHHHHhhCCChhhHHHHHHHHHHHHHHHHHHHHHHhHHhhhcCC
Q 014481 330 KAIFRSKAVWAMIYAHFC-GSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGV 404 (423)
Q Consensus 330 ~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~r~~ 404 (423)
+++++++..+...+..++ .....+.+..|+|.|+++.+|++..+++....+..++.+++.++.|+++||++||+.
T Consensus 236 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~i~~~~~~i~~~~~G~l~Dr~grr~~ 311 (432)
T PRK10406 236 KGLWRNRRAFIMVLGFTAAGSLCFYTFTTYMQKYLVNTAGMHANVASGIMTAALFVFMLIQPLIGALSDKIGRRTS 311 (432)
T ss_pred HHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHH
Confidence 788899988877665554 366778888999999988889999899888888888888999999999999998854
No 13
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=99.97 E-value=8.5e-28 Score=227.55 Aligned_cols=261 Identities=17% Similarity=0.216 Sum_probs=210.9
Q ss_pred hHHHHHHHHHHHHHHHhhhhhhhhhHHHhhhhhCCCcchhhHHHHHHHHHHHhhhhhhhhHhhHhcCchHHHHHHHHHHH
Q 014481 112 RYKLIGTTSLAFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSL 191 (423)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~ 191 (423)
.|+.+..+..+.+..........+.+|.+.+++|+++.+.++..+++.++..+++++.|+++||+|||++++.+.++.++
T Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~grr~~~~~~~~~~~~ 97 (394)
T PRK10213 18 NWSAVFSVAFCVACLIIVEFLPVSLLTPMAQDLGISEGVAGQSVTVTAFVAMFASLFITQTIQATDRRYVVILFAVLLTL 97 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcHHHHHHHHHHHHH
Confidence 44554455555444444555666678899999999999999999999999999999999999999999999999999998
Q ss_pred HHHHHHHhhhHHHHHHHHHHHHHhhcccchHhHHHHHHhcCCCCchhhHHHHHHhhhhhHHHHHHhhHHHhhhccCchHH
Q 014481 192 ATALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESV 271 (423)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~ 271 (423)
+.+++ ...++++.++++|+++|++.+...+...+++.|++|+++|++++++...+.++|.++||++++.+.+.+|||+.
T Consensus 98 ~~~~~-~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~~~l~~~~gw~~~ 176 (394)
T PRK10213 98 SCLLV-SFANSFSLLLIGRACLGLALGGFWAMSASLTMRLVPPRTVPKALSVIFGAVSIALVIAAPLGSFLGELIGWRNV 176 (394)
T ss_pred HHHHH-HHHChHHHHHHHHHHHHHhhHHHHHHHHHHHHHHcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCHHHH
Confidence 88776 45788899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHH-hhccCCcCcCCCCCcchhhhhhhhhhhhhHHhhccccCCCcHHHhhhcHHHHHHHHHHHHHHH
Q 014481 272 FYIFGLLGIAWFSGFK-ILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSW 350 (423)
Q Consensus 272 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 350 (423)
|++.+++.++..+... ..|+.++++ +.. ...+++.+++|.++...+..++...
T Consensus 177 f~~~~~l~~~~~l~~~~~~p~~~~~~----~~~----------------------~~~~~~~l~~~~~~~~~~~~~~~~~ 230 (394)
T PRK10213 177 FNAAAVMGVLCIFWIIKSLPSLPGEP----SHQ----------------------KQNTFRLLQRPGVMAGMIAIFMSFA 230 (394)
T ss_pred HHHHHHHHHHHHHHHHHHCCCCCccc----ccc----------------------hhHHHHHhcCHHHHHHHHHHHHHHH
Confidence 9998877665443332 233321100 000 0013567889999887776666666
Q ss_pred HHHHHHhhh-hHHHHHhhCCChhhHHHHHHHHHHHHHHHHHHHHHHhHHhh
Q 014481 351 GHYTCLSWL-PTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLI 400 (423)
Q Consensus 351 ~~~~~~~~~-~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~ 400 (423)
..+....++ |.|. +++|+++.+.+.+....+++++++.++.+++.||.+
T Consensus 231 ~~~~~~~~~~p~~~-~~~g~s~~~~g~~~~~~~~~~iig~~~~~~l~~r~~ 280 (394)
T PRK10213 231 GQFAFFTYIRPVYM-NLAGFGVDGLTLVLLSFGIASFVGTSLSSFILKRSV 280 (394)
T ss_pred HHHHHHHHHHHHHH-HhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 666666676 5555 457999999999999999999999999999999854
No 14
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=99.97 E-value=4.7e-28 Score=229.36 Aligned_cols=269 Identities=18% Similarity=0.226 Sum_probs=223.4
Q ss_pred HHHHHHHHHHHHHHhhhhhhhhhHHHhhhhhCCCcchhhHHHHHHHHHHHhhhhhhhhHhhHhcCchHHHHHHHHHHHHH
Q 014481 114 KLIGTTSLAFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLAT 193 (423)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~ 193 (423)
+.+..+.+..+..........+.+|.+.+++|.++.+.+++.+++.++..+++++.|++.||+|||+++..+.++.+++.
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~ 84 (385)
T TIGR00710 5 AFALLLGCLSILGPLGIDMYLPAFPEIAADLSTPASIVQMTLTLYLLGFAAGQLLWGPLSDRYGRRPVLLLGLFIFALSS 84 (385)
T ss_pred HHHHHHHHHHHHHHHHHHHhcccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHHHH
Confidence 44444444455666777888889999999999999999999999999999999999999999999999999999988888
Q ss_pred HHHHHhhhHHHHHHHHHHHHHhhcccchHhHHHHHHhcCCCCchhhHHHHHHhhhhhHHHHHHhhHHHhhhccCchHHHH
Q 014481 194 ALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFY 273 (423)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~~~ 273 (423)
+++ ...++++.+++.|++.|++.+...+...+++.|++|+++|++++++.+....+|..+||.+++.+.+..+||+.|+
T Consensus 85 ~~~-~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~ 163 (385)
T TIGR00710 85 LGL-ALSNNIETLLVLRFVQAFGASAGSVISQALVRDIYPGEELSRIYSILMPVLALAPAVAPLLGGYILVWLSWHAIFA 163 (385)
T ss_pred HHH-HHHccHHHHHHHHHHHHcchhHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHH
Confidence 776 4567788999999999999999999999999999999999999999999999999999999999999899999999
Q ss_pred HHHHHHHHHHHHHHh-hccCCcCcCCCCCcchhhhhhhhhhhhhHHhhccccCCCcHHHhhhcHHHHHHHHHHHHHHHHH
Q 014481 274 IFGLLGIAWFSGFKI-LQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGH 352 (423)
Q Consensus 274 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 352 (423)
+.+++.++..+..++ .+|+++.+.+ .+.+ + . ...+++++++|.++...+...+.....
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~-----~----~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (385)
T TIGR00710 164 FLSLAGILLSALIFFILPETLPYEAR---IQIS-----T----Y---------FETFLLLLKSKMFWGYALIYGASFGGF 222 (385)
T ss_pred HHHHHHHHHHHHHHHhCCCCCCCccc---CCHH-----H----H---------HHHHHHHHcCchhHHHHHHHHHHHHHH
Confidence 988877665544433 4443322111 0000 0 0 012467788999988877777777777
Q ss_pred HHHHhhhhHHHHHhhCCChhhHHHHHHHHHHHHHHHHHHHHHHhHHhhhcCC
Q 014481 353 YTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGV 404 (423)
Q Consensus 353 ~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~r~~ 404 (423)
+....+.|.++++.+|+++.+.+.+.....++.+++.++.|++.||+++|+.
T Consensus 223 ~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~~~~~~~~ 274 (385)
T TIGR00710 223 FAFFSGAPFVYIDIMGVSPSVFGLLFALNIIAMIFGGFLNGRFIKKWGAKSL 274 (385)
T ss_pred HHHHHcChHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHH
Confidence 7888889999988889999999999999999999999999999999998754
No 15
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=99.97 E-value=1.5e-28 Score=231.13 Aligned_cols=264 Identities=13% Similarity=0.120 Sum_probs=212.4
Q ss_pred HHHHHHHHHHHHHHHhhhhhhhhhHHHhhh-hhCCCcchhhHHHHHHHHHHHhhhhhhhhHhhHhcCchHHHHHHHHHHH
Q 014481 113 YKLIGTTSLAFVICNMDKVNLSVAIIPMSH-RFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSL 191 (423)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~ 191 (423)
++.+....+++++.+.....+++..+.+.+ ++|+|.++.+++.+++.+++.++.++.|++.||+|.|+++.++.+++++
T Consensus 33 ~r~l~~s~~~f~~~F~~w~~~~~l~~~~~~~~~~ls~~q~g~l~ai~~l~~al~rip~G~l~Dr~G~R~v~~~~~ll~~i 112 (462)
T PRK15034 33 RRNLWISVSCLLLAFCVWMLFSAVTVNLNKIGFNFTTDQLFLLTALPSVSGALLRVPYSFMVPIFGGRRWTVFSTAILII 112 (462)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHH
Confidence 467778888899999999999999888766 8999999999999999999999999999999999999999999999988
Q ss_pred HHHHHHHh----hhHHHHHHHHHHHHHhhcccchHhHHHHHHhcCCCCchhhHHHHHHhhhhhHHHHHHhhHHHhh----
Q 014481 192 ATALLPLL----AGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPII---- 263 (423)
Q Consensus 192 ~~~~~~~~----~~~~~~~~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~---- 263 (423)
..++.+.. .++++.+++.|++.|++ +..++.....+++|+|+++||+++|+.....++|..++++++..+.
T Consensus 113 ~~~~~~~a~~~~~~s~~~lli~r~l~Gig-g~~f~~~~~~vs~wfp~~~rG~A~Gi~~g~G~~G~~l~~~l~p~~i~~~l 191 (462)
T PRK15034 113 PCVWLGIAVQNPNTPFGIFIVIALLCGFA-GANFASSMGNISFFFPKAKQGSALGINGGLGNLGVSVMQLVAPLVIFVPV 191 (462)
T ss_pred HHHHHHHHHcccCCCHHHHHHHHHHHHHH-HHhHHHHHHHHHHHCCHhHhHHHHHHHHHHHhhHHHHHHHHHHHHHHHHH
Confidence 88777543 16789999999999998 7788999999999999999999999998777777776666655433
Q ss_pred -h-------------ccCchHHHHHHHHHHHHHHHHHHhhccCCcCcCCCCCcchhhhhhhhhhhhhHHhhccccCCCcH
Q 014481 264 -E-------------NLGWESVFYIFGLLGIAWFSGFKILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPW 329 (423)
Q Consensus 264 -~-------------~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 329 (423)
. ..+||.++++.+++.++..+..++..++++..+. .. ..+
T Consensus 192 ~~~~G~~~~~~~~g~~~~~~~~~~~~~~~~iv~~i~~~~~~~~~~~~~~---~~-----------------------~~~ 245 (462)
T PRK15034 192 FAFLGVNGVPQADGSVMSLANAAWIWVPLLAIATIAAWSGMNDIASSRA---SI-----------------------ADQ 245 (462)
T ss_pred HHHhccccccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCcccccc---CH-----------------------HHH
Confidence 2 2347888888888777666555555444332100 00 014
Q ss_pred HHhhhcHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHhhCCChhhHHHHHHHHHHHHHHHHHHHHHHhHHhhhcCCc
Q 014481 330 KAIFRSKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVE 405 (423)
Q Consensus 330 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~r~~~ 405 (423)
.+++|+|+.|.+++.+++.+..+.++..++|.|+++.+ +.........+..+...++++++|+++||+|+++..
T Consensus 246 ~~vlk~~~~Wllslly~~tFG~fvg~s~~lp~~~~~~~--~~~~~l~~~~l~~l~~~l~rplgG~LADRiG~~~vl 319 (462)
T PRK15034 246 LPVLQRLHLWLLSLLYLATFGSFIGFSAGFAMLAKTQF--PDVNILRLAFFGPFIGAIARSVGGAISDKFGGVRVT 319 (462)
T ss_pred HHHhCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHc--ChHHHHHHHHHHHHHHHHHHHhhHHHHHhcCchHHH
Confidence 67899999999999999999999999999999998754 333333334455678888999999999999988543
No 16
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=99.97 E-value=6.1e-29 Score=223.07 Aligned_cols=273 Identities=21% Similarity=0.260 Sum_probs=236.6
Q ss_pred hHHHHHHHHHHHHHHHhhhhhhhhhHHHhhhhhCCCcchhhHHHHHHHHHHHhhhhhhhhHhhHhcCchHHHHHHHHHHH
Q 014481 112 RYKLIGTTSLAFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSL 191 (423)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~ 191 (423)
+++.+.+..+...+.+..+.++++..+.+.+++|+|+.|.+++.++..+...+..++.|.+.||+|.|++..++.++..+
T Consensus 12 ~~~~L~~S~~af~v~F~VW~l~s~l~~~i~~~~~LS~~q~~ll~aiPil~GallRl~~g~l~drfGgR~~~~~s~~l~~I 91 (417)
T COG2223 12 ARRNLWLSTLAFDVGFMVWTLFSPLGVFIKSDFGLSEGQKGLLVAIPILVGALLRLPYGFLTDRFGGRKWTILSMLLLLI 91 (417)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhhhccccCCCHHHHHHHHHHHHHHhHHHHHHHHhhhcccCchHHHHHHHHHHHH
Confidence 45777888888888999999999999999999999999999999999999999999999999999999999999999888
Q ss_pred HHHHHHHhhh--HHHHHHHHHHHHHhhcccchHhHHHHHHhcCCCCchhhHHHHHHhhhhhHHHHHHhhHHHhhhccC--
Q 014481 192 ATALLPLLAG--FMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLG-- 267 (423)
Q Consensus 192 ~~~~~~~~~~--~~~~~~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g-- 267 (423)
..+..+...+ +++.+++++++.|++ |+...+...+++.+||++++|.++|++. ..|+|..+..+++..++...|
T Consensus 92 P~~~~~~a~~~~~~~~ll~~gll~G~~-GasFav~m~~~s~~fP~~~qG~AlGI~g-~GN~G~av~q~~~P~v~~~~g~~ 169 (417)
T COG2223 92 PCLGLAFAVTYPSTWQLLVIGLLLGLA-GASFAVGMPNASFFFPKEKQGLALGIAG-AGNLGVAVAQLVAPLVAVAFGFL 169 (417)
T ss_pred HHHHHHHHccCCchHHHHHHHHHHhcc-cceehcccccccccCChhhhhHHHHHhc-cccccHHHHHHHHHHHHHHHhhH
Confidence 8877754433 345999999999998 5566888999999999999999999999 999999999999999998888
Q ss_pred -chHHHHHHHHHHHHHHHHHHhhccCCcCcCCCCCcchhhhhhhhhhhhhHHhhccccCCCcHHHhhhcHHHHHHHHHHH
Q 014481 268 -WESVFYIFGLLGIAWFSGFKILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHF 346 (423)
Q Consensus 268 -w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 346 (423)
|+.+.++..+..++..+..++..++.+......++... ..++.++++++.|.+++.++
T Consensus 170 ~w~~~~~i~~~~l~v~~v~~~~~~~d~p~~r~~~~~~~~---------------------~~~~~v~~~~~~W~lsllY~ 228 (417)
T COG2223 170 AWRNVAGIYVVALAIAAVLAWLGMNDVPEHRASVKPQLP---------------------AQLKAVFSNKDTWLLSLLYF 228 (417)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCChhhhccccccch---------------------hHHHHHhcCcchHHHHHHHH
Confidence 99999998888888777666665555432111111100 12578899999999999999
Q ss_pred HHHHHHHHHHhhhhHHHHHhhCCChhhHHHHHHHHHHHHHHHHHHHHHHhHHhhhcCCccc
Q 014481 347 CGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETT 407 (423)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~r~~~~~ 407 (423)
..+.++.++..++|.|++++||.++.+++.......+.+.+.++++|+++||+|.+|....
T Consensus 229 ~tFG~Fvgfs~~l~~~~~~~fg~~~~~Ag~~a~~f~~~g~l~Rp~GG~LsDR~Gg~rv~~~ 289 (417)
T COG2223 229 ATFGGFVGFSAYLPMYLVTQFGLSPVTAGLIAFLFPLIGALARPLGGWLSDRIGGRRVTLA 289 (417)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHHHHhccchhhhhccchhHHHH
Confidence 9999999999999999999999999999999999999999999999999999998865443
No 17
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=99.97 E-value=2.6e-28 Score=242.63 Aligned_cols=186 Identities=14% Similarity=0.163 Sum_probs=165.2
Q ss_pred chhHHHHHHHHHHHHHHHhhhhhhhhhHHHhhhhhCCCcchhhHHHHHHHHHHHhhhhhhhhHhhHhcCchHHHHHHHHH
Q 014481 110 PQRYKLIGTTSLAFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIW 189 (423)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~ 189 (423)
+..|.+++++.++.+...++...++..+|.+.+++|++..+.+++.+++.++.+++++++|+++||+|||++++++.++.
T Consensus 163 ~~~~~l~~i~~l~~~~~g~d~~~is~ilp~i~~~~gls~~~~g~l~s~~~lG~iiG~li~G~LsDR~GRR~~lii~lil~ 242 (742)
T TIGR01299 163 RFQWALFFVLGLALMADGVEVFVVGFVLPSAEKDLCIPDSGKGMLGLIVYLGMMVGAFFWGGLADKLGRKQCLLICLSVN 242 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHH
Confidence 45677777778888888888888999999999999999999999999999999999999999999999999999999998
Q ss_pred HHHHHHHHHhhhHHHHHHHHHHHHHhhcccchHhHHHHHHhcCCCCchhhHHHHHHhhhhhHHHHHHhhHHHhhhc----
Q 014481 190 SLATALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIEN---- 265 (423)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~---- 265 (423)
+++.+++ .++++++.++++|++.|++.++..+...+++.|++|+++|++.++++..+..+|.++++.++..+...
T Consensus 243 ~i~~ll~-afa~s~~~llv~R~l~G~g~g~~~p~~~~~isE~~p~~~Rg~~~g~~~~~~~iG~ila~~la~~il~~~G~~ 321 (742)
T TIGR01299 243 GFFAFFS-SFVQGYGFFLFCRLLSGFGIGGAIPIVFSYFAEFLAQEKRGEHLSWLCMFWMIGGIYAAAMAWAIIPHYGWS 321 (742)
T ss_pred HHHHHHH-HHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccch
Confidence 8888777 46677899999999999999999999999999999999999999999999999999999988776543
Q ss_pred ---------cCchHHHHHHHHHHHHHHHHHHhhccCCcCc
Q 014481 266 ---------LGWESVFYIFGLLGIAWFSGFKILQEGETSN 296 (423)
Q Consensus 266 ---------~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (423)
.+||+.+++.++..++.++..+++||+++..
T Consensus 322 ~~~g~~~~~~gWR~l~~i~~lp~ll~ll~~~~lPESPrwL 361 (742)
T TIGR01299 322 FQMGSAYQFHSWRVFVIVCAFPCVFAIGALTFMPESPRFF 361 (742)
T ss_pred hccccccccccHHHHHHHHHHHHHHHHHHHHHcCCCHHHH
Confidence 3689999988888877777788889987653
No 18
>PRK03699 putative transporter; Provisional
Probab=99.97 E-value=6.5e-28 Score=228.82 Aligned_cols=269 Identities=17% Similarity=0.188 Sum_probs=220.3
Q ss_pred hhHHHHHHHHHHHHHHHhhhhhhhhhHHHhhhhhCCCcchhhHHHHHHHHHHHhhhhhhhhHhhHhcCchHHHHHHHHHH
Q 014481 111 QRYKLIGTTSLAFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWS 190 (423)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~ 190 (423)
+|++.....++.+++........+..+|.+.+++|++..+.+++.+.+.+++.+++++.|++.||+|||++++.+.++.+
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~i~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~g~r~~~~~~~~~~~ 83 (394)
T PRK03699 4 NRIKLTWISFLSYALTGALVIVTGMVMGPIAEYFNLPVSSMSNTFTFLNAGILISIFLNAWLMEIIPLKRQLIFGFALMI 83 (394)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 35677777788888888888899999999999999999999999999999999999999999999999999999998888
Q ss_pred HHHHHHHHhhhHHHHHHHHHHHHHhhcccchHhHHHHHHhcCCCCchhhHHHHHHhhhhhHHHHHHhhHHHhhh-ccCch
Q 014481 191 LATALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIE-NLGWE 269 (423)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~-~~gw~ 269 (423)
++.++. ...++++.++++|++.|++.+...+...+++.+++|+++|+++++..+....+|..++|.+.+.+.. ..|||
T Consensus 84 i~~~l~-~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~gw~ 162 (394)
T PRK03699 84 LAVAGL-MFSHSLALFSIAMFVLGVVSGITMSIGTFLITHVYEGKQRGSRLLFTDSFFSMAGMIFPIIAAYLLARSIEWY 162 (394)
T ss_pred HHHHHH-HHcchHHHHHHHHHHHHHhhHhhccchhHHhhhhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccHH
Confidence 888777 4567788899999999999998888889999999998899999999999999999999999888764 57999
Q ss_pred HHHHHHHHHHHHHHHHHHhhccCCcCcCCCCCcchhhhhhhhhhhhhHHhhccccCCCcHHHhhhcHHHHHHHHHHHHHH
Q 014481 270 SVFYIFGLLGIAWFSGFKILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGS 349 (423)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 349 (423)
+.|.+.+++.++..+..++. +.++.++.+. +++ +... +. ..++.++...+..++..
T Consensus 163 ~~f~~~~~~~~~~~~~~~~~-~~p~~~~~~~-~~~-----------------~~~~----~~-~~~~~~~~~~~~~~~~~ 218 (394)
T PRK03699 163 WVYACIGLVYVAIFILTLFS-EFPALGKHAP-KAD-----------------KPVA----KE-KWGIGVLFLAIAALLYI 218 (394)
T ss_pred HHHHHHHHHHHHHHHHHHhc-CCccccccCc-ccc-----------------Cccc----cc-cCChHHHHHHHHHHHHH
Confidence 99999888776655444332 2111111000 000 0000 01 12456777777777777
Q ss_pred HHHHHHHhhhhHHHHHhhCCChhhHHHHHHHHHHHHHHHHHHHHHHhHHhhhcCC
Q 014481 350 WGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGV 404 (423)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~r~~ 404 (423)
..++.+..|+|.|+++.+|+++.+++.+.+...++.++++++.|++.||+++|+.
T Consensus 219 ~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~ 273 (394)
T PRK03699 219 LAQLTFISWVPEYAQKKFGMSLEDAGNLVSNFWMAYMVGMWIFSFIVRFFDLQRI 273 (394)
T ss_pred HHHHHHHHHHHHHHHHHcCCChHHhhHHHHHHHHHHHHHHHHHHHHHHHhchhhH
Confidence 7888889999999988889999999999999999999999999999999998854
No 19
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=99.97 E-value=5.3e-28 Score=230.51 Aligned_cols=292 Identities=15% Similarity=0.196 Sum_probs=220.5
Q ss_pred hhHHHHHHHHHHHHHHHhhhhhhhhhHHHhhhhhCCCcchhhHHHHHHHHHHHhhhhhhhhHhhHhcCchHHHHHHHHHH
Q 014481 111 QRYKLIGTTSLAFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWS 190 (423)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~ 190 (423)
++|+.+..++++++...++....++..|.+.+++|++..+.+++.+++.++..+++++.|+++||+|||++++++.++.+
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~~~~~~~~~~ 88 (405)
T TIGR00891 9 AQWNAFSAAWLGWLLDAFDFFLVALVLAEVAGEFGLTTVDAASLISAALISRWFGALMFGLWGDRYGRRLPMVTSIVLFS 88 (405)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHH
Confidence 46788888999999999999999999999999999999999999999999999999999999999999999999999988
Q ss_pred HHHHHHHHhhhHHHHHHHHHHHHHhhcccchHhHHHHHHhcCCCCchhhHHHHHHhhhhhHHHHHHhhHHHhhhccC--c
Q 014481 191 LATALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLG--W 268 (423)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g--w 268 (423)
++.+++ ...++++.+++.|++.|++.+...+...+++.|++|+++|++++++.+.+..+|.++++.+++.+.+..+ |
T Consensus 89 ~~~~~~-~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~~~w 167 (405)
T TIGR00891 89 AGTLAC-GFAPGYITMFIARLVIGIGMGGEYGSSAAYVIESWPKHLRNKASGLLISGYAVGAVVAAQVYSLVVPVWGDGW 167 (405)
T ss_pred HHHHHH-HHhccHHHHHHHHHHHHhhhhhhhHHHHHHHHHhCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccH
Confidence 888777 4567789999999999999999999999999999999999999999999999999999999999988766 9
Q ss_pred hHHHHHHHHHHHHHHHHHHhhccCCcCcCCCCCcchhhhhhhhhhhhhHHhhccccC--CCcHHHhh-hc-HHHHHHHHH
Q 014481 269 ESVFYIFGLLGIAWFSGFKILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLK--DVPWKAIF-RS-KAVWAMIYA 344 (423)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~-~~-~~~~~~~l~ 344 (423)
|+.|++.++..++..+....+||+++.++.+..++.......+..... ...+...+ ....++.. ++ +.+....+.
T Consensus 168 ~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (405)
T TIGR00891 168 RALFFISILPIIFALWLRKNIPEAEDWKEKHAGKALVRTMVDILYGGE-HRIANIVMTLAAAMVQSAGKRWPTFVYLVVL 246 (405)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCChhHHHHhhhhhhhhhHHHHHhccc-hhhhhhhhhhhHHhhhhhhhhhHHHHHHHHH
Confidence 999988766665555555555554332111110000000000000000 00000000 00001111 11 112223333
Q ss_pred HHHHHHHHHHHHhhhhHHHHHhhCCChhhHHHHHHHHHHHHHHHHHHHHHHhHHhhhcCC
Q 014481 345 HFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGV 404 (423)
Q Consensus 345 ~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~r~~ 404 (423)
..+..........++|.|+.+.+|++..+++.+.+...++.+++.++.+++.||+++|+.
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~g~~~~ 306 (405)
T TIGR00891 247 VLFANLYSHPIQDLLPTYLKADLGLSPHTVANIVVFSNIGAIVGGCVFGFLGDWLGRRKA 306 (405)
T ss_pred HHHHHHHHhhhhhhhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchhh
Confidence 444445555667789999988889999999999999999999999999999999998854
No 20
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=99.97 E-value=1.7e-28 Score=229.08 Aligned_cols=251 Identities=17% Similarity=0.097 Sum_probs=197.0
Q ss_pred HHhhhhhhhhhHHHhhhhhCCCcchhhHHHHHHHHHHHhhhhhhhhHhhHhcCchHHHHHHHHHHHHHHHHHHhhhHHHH
Q 014481 126 CNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPLLAGFMPG 205 (423)
Q Consensus 126 ~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (423)
+......+++.+|.+.+++|++..+.|++.+.+.+++.+++++.|+++||+|||++++.+.+....+ .+.....++++.
T Consensus 3 ~~~~~~~~~~~lp~i~~~~~~s~~~~g~~~s~~~~g~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~-~~~~~~~~~~~~ 81 (368)
T TIGR00903 3 SQAIWVTFSPVLSLVAEDIDVSKEELGLLAITYPAAFLALTIPSGLLLDRAFKRWFLFGSLATFAAA-AGRLLDPFNYEW 81 (368)
T ss_pred hhHHHHHHHhhHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHH-HHHHHHhccHHH
Confidence 4456678889999999999999999999999999999999999999999999988766554444333 333233367899
Q ss_pred HHHHHHHHHhhcccchHhHHHHHHhcCCCCchhhHHHHHHhhhhhHHHHHHhhHHHhhhccCchHHHHHHHHHHHHHH-H
Q 014481 206 LVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAWF-S 284 (423)
Q Consensus 206 ~~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~~~~~~~~~~~~~-~ 284 (423)
++++|+++|++.+. .......+++++|+++|++++++.+.+..+|.++++++++.+.+..|||+.|++.+++.++.. +
T Consensus 82 l~~~R~l~G~g~~~-~~~~~~~~~~~~~~~~r~~a~~~~~~~~~lG~~l~~~~~~~l~~~~gWr~~f~~~~~l~~~~~~~ 160 (368)
T TIGR00903 82 LLACQLLAALGQPF-LLNAFAPAASQIREERRDLVISLLSFAMYLGIIFALAAGLKIYTAGGLQLLIIPIAAVAAAGIIL 160 (368)
T ss_pred HHHHHHHHHhHhHH-HHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHH
Confidence 99999999999886 456667779999999999999999999999999999999999999999999999888876654 4
Q ss_pred HHHhhccCCcCcCCCCCcchhhhhhhhhhhhhHHhhccccCCCcHHHhhhcHHHHHHHHHHHHHHHHHHHHHhhhhHHHH
Q 014481 285 GFKILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLSWLPTYFS 364 (423)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 364 (423)
..+++||+++...+ ..+. .+ .. .++++++++|.+|...+..++....++++.+|+|.|++
T Consensus 161 ~~~~lp~~p~~~~~---~~~~----~~----~~---------~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~wlp~~L~ 220 (368)
T TIGR00903 161 VLAALPALPFQAAE---GFGF----KD----AV---------KEFGALAGRKDLWIIGAILGFGVALFDNLAIWLEAALR 220 (368)
T ss_pred HHHHcCCCCCCCCC---Ccch----HH----HH---------HHHHHHHcChhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44556665432211 0000 00 00 12678999999999999999999999999999999997
Q ss_pred HhhCCChhhHHHHHHHHHHHHHHHHHHHHHHhHHhhhcC
Q 014481 365 EELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATG 403 (423)
Q Consensus 365 ~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~r~ 403 (423)
+ .|++.. .+....+..+.++++ .++++||..||+
T Consensus 221 ~-~g~s~~-~~~~~~l~~~~g~~g---~~~~~d~~~r~~ 254 (368)
T TIGR00903 221 P-AGLEDI-AGDAVALAILAGLIG---VAVIPDRVARAG 254 (368)
T ss_pred H-CCCChH-HHHHHHHHHHHHHHH---HHHhhHHhhhhh
Confidence 6 588865 566656655555555 578888887653
No 21
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=99.96 E-value=3.7e-28 Score=237.25 Aligned_cols=288 Identities=22% Similarity=0.230 Sum_probs=232.4
Q ss_pred HHHHHHHHHHHHHHhhhhhhhhhHHHhhhhhCCCcchhhHHHHHHHHHHHhhhhhhhhHhhHhcCchHHHHHHHHHHHHH
Q 014481 114 KLIGTTSLAFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLAT 193 (423)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~ 193 (423)
+.+..++++.++..++.....+.+|.+.+++|.+..+.+++.+.+.++..++.++.|+++||+|||++++++.++.+++.
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~ 81 (485)
T TIGR00711 2 LLTIVLMLGTFMAVLDSTIVNVAIPTIAGDLGSSLSQVQWVITSYMLANAISIPLTGWLAKRFGTRRLFLISTFAFTLGS 81 (485)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhhhhHHHHHHHHHHHHHHHhHHHHHHHhCcHHHHHHHHHHHHHHH
Confidence 34566777888888999999999999999999999999999999999999999999999999999999999999999988
Q ss_pred HHHHHhhhHHHHHHHHHHHHHhhcccchHhHHHHHHhcCCCCchhhHHHHHHhhhhhHHHHHHhhHHHhhhccCchHHHH
Q 014481 194 ALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFY 273 (423)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~~~ 273 (423)
+++ ..+++++.++++|+++|++.+...+...+++.|++|+++|+++++++..+..+|..+||.+++++.++.|||+.|+
T Consensus 82 ~~~-~~~~~~~~l~~~~~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~w~~~f~ 160 (485)
T TIGR00711 82 LLC-GVAPNLELMIIFRVIQGFGGGPLIPLSFSTLLNIYPPEKRGRAMAIWGLTVLVAPALGPTLGGWIIENYHWRWIFL 160 (485)
T ss_pred HHH-hCcCCHHHHHHHHHHHHhhhhhHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHhhhhhccHhHhccCcCceehhh
Confidence 777 5667889999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHH-HhhccCCcCcCCCCCcchhh---------------hhhhhhh-hh-----------------hHHh
Q 014481 274 IFGLLGIAWFSGF-KILQEGETSNGATLAPRSNY---------------INMKKSL-SA-----------------SLEE 319 (423)
Q Consensus 274 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~-~~-----------------~~~~ 319 (423)
+.+++.++..+.. ++++++++... +..+.... ....... .. ...+
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~d~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (485)
T TIGR00711 161 INVPIGIIVVVVAFFILPRDKPAAS-ENFDFLGLLLLSVGLGSLLYGLSEGPERGWFDSNEILILSITGLVAIIAFVVWE 239 (485)
T ss_pred hhhHHHHHHHHHHHHHcCCcccccc-CCCcHHHHHHHHHHHHHHHHHHhhCCCCCCCCchHHHHHHHHHHHHHHHHHHHH
Confidence 9888876654444 34444332211 11110000 0000000 00 0011
Q ss_pred hccccCCCcHHHhhhcHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHhhCCChhhHHHHHHHHHHHHHHHHHHHHHHhHHh
Q 014481 320 MGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNL 399 (423)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~ 399 (423)
...+.+.. -.+++++|.++...+..++..+..+....++|.|+++.+|+++.++++...+..++.+++.++.|++.||+
T Consensus 240 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~ 318 (485)
T TIGR00711 240 LTDDNPLV-DLRLFKYRNFTIGCVYMSLLGLGLYGSFYLLPLYLQQVLGYTALQAGLHILPVGLAPMLSSPIAGRMGDKI 318 (485)
T ss_pred HcCCCCcc-CHHHHcCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 11111112 24678899998888888888888888899999999998999999999999999999999999999999999
Q ss_pred hhcCC
Q 014481 400 IATGV 404 (423)
Q Consensus 400 ~~r~~ 404 (423)
++|+.
T Consensus 319 ~~~~~ 323 (485)
T TIGR00711 319 DPRKL 323 (485)
T ss_pred CcHHH
Confidence 98753
No 22
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=99.96 E-value=8.3e-28 Score=227.74 Aligned_cols=263 Identities=14% Similarity=0.183 Sum_probs=212.6
Q ss_pred HHHHHHHHHHHHHHHhhhhhhhhhHHHhhhhhCCCcchhhHHHHHHHHHHHhhhhhhhhHhhHhcCchHHHHHHHHHHHH
Q 014481 113 YKLIGTTSLAFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLA 192 (423)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~ 192 (423)
|.....++++.+... .....++.+|.+.+++|+|..+.+++.+.+.+++.+++++.|+++||+|||+++..+.++++++
T Consensus 9 ~~~~~~~~~~~~~~~-~~~~~~~~lp~i~~~~~~s~~~~g~~~s~~~~~~~l~~~~~g~l~dr~G~r~~l~~~~~l~~~~ 87 (393)
T PRK09705 9 FMLLVLVLIGLNMRP-LLTSVGPLLPQLRQASGMSFSVAALLTALPVVTMGGLALAGSWLHQHVSERRSVAISLLLIAVG 87 (393)
T ss_pred HHHHHHHHHHHHcch-hhhccchhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHhCchHHHHHHHHHHHHH
Confidence 344444444433322 2366778999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhhHHHHHHHHHHHHHhhcccchHhHHHHHHhcCCCCchhhHHHHHHhhhhhHHHHHHhhHHHhhhcc-CchHH
Q 014481 193 TALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENL-GWESV 271 (423)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~-gw~~~ 271 (423)
.+++ .++++++.+++.|+++|++.+...+....++.+++| ++|+++++++..+..+|..+|+.+++++.++. +||+.
T Consensus 88 ~~~~-~~a~~~~~ll~~r~l~Gig~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~g~~~~~~l~~~~~~w~~~ 165 (393)
T PRK09705 88 ALMR-ELYPQSALLLSSALLGGVGIGIIQAVMPSVIKRRFQ-QRTPLVMGLWSAALMGGGGLGAAITPWLVQHSETWYQT 165 (393)
T ss_pred HHHH-HHCcchHHHHHHHHHHHhHHHHHhhhhhHHHHHHcc-ccchhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHH
Confidence 9888 467778899999999999999999999999999997 88999999999999999999999999988875 89998
Q ss_pred HHHHHHHHHHHHHHHHhhccCCcCcCCCCCcchhhhhhhhhhhhhHHhhccccCCCcHHHhhhcHHHHHHHHHHHHHHHH
Q 014481 272 FYIFGLLGIAWFSGFKILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWG 351 (423)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 351 (423)
+.+.++..++..+..+...+++++.+.+ ++ ...++.++++..|...+..++....
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~-----------------------~~~~~~l~~~~~~~l~~~~~~~~~~ 220 (393)
T PRK09705 166 LAWWALPAVVALFAWWWQSAREVASSHK--TT-----------------------TTPVRVVFTPRAWTLGVYFGLINGG 220 (393)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCccccC--CC-----------------------cCCcccccCHhHHHHHHHHHHHHHH
Confidence 8776666554443333332222111000 00 0113456778888877777777788
Q ss_pred HHHHHhhhhHHHHHhhCCChhhHHHHHHHHHHHHHHHHHHHHHHhHHhhhcCC
Q 014481 352 HYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGV 404 (423)
Q Consensus 352 ~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~r~~ 404 (423)
+.....|+|.|+++ +|++..+++.+.++..++.++++++.+++.||+++|+.
T Consensus 221 ~~~~~~~lp~~l~~-~g~s~~~ag~~~~~~~i~~i~g~~~~g~l~~r~~~~~~ 272 (393)
T PRK09705 221 YASLIAWLPAFYIE-IGASAQYSGSLLALMTLGQAAGALLMPAMARHQDRRKL 272 (393)
T ss_pred HHHHHHHHHHHHHH-cCCChhhhhHHHHHHHHHHHHHHHHHHHHHhhccchHH
Confidence 88899999999987 79999999999999999999999999999999988744
No 23
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=99.96 E-value=1e-28 Score=233.13 Aligned_cols=278 Identities=19% Similarity=0.242 Sum_probs=221.1
Q ss_pred HHHHHHhhhhhhhhhHHHhhhhhCCCcchhhHHHHHHHHHHHhhhhhhhhHhhHhcCchHHHHHHHHHHHHHHHHHHhhh
Q 014481 122 AFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPLLAG 201 (423)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~~ 201 (423)
+++..+.+...++...|.+.+++|.+..+.+++.+++.++..++.++.|+++||+|||++++++.++.+++.+++ ...+
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~-~~~~ 81 (379)
T TIGR00881 3 GYAAYYLVRKNFALAMPYLVEEIGLSKTDLGLLLSSFSIAYGISKFVMGSVSDRSNPRVFLPIGLILCAIVNLFF-GFST 81 (379)
T ss_pred hhhHHHHhHHhhhhhhHHHHHHhCCCHhHHHHHHHHHHHHHHhhhhhhhHHHHhhCCeehhHHHHHHHHHHHHHH-HHhh
Confidence 456777888899999999999999999999999999999999999999999999999999999999998888777 4566
Q ss_pred HHHHHHHHHHHHHhhcccchHhHHHHHHhcCCCCchhhHHHHHHhhhhhHHHHHH-hhHHHhhhccCchHHHHHHHHHHH
Q 014481 202 FMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGL-LLAPPIIENLGWESVFYIFGLLGI 280 (423)
Q Consensus 202 ~~~~~~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~-~~~~~l~~~~gw~~~~~~~~~~~~ 280 (423)
+++.+++.|++.|++.+...+...+++.+++|+++|++++++.+.+..+|..++| .+++.+.+..+||+.|++.+++.+
T Consensus 82 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (379)
T TIGR00881 82 SLWVMAALWALNGIFQGMGWPPCGRTVTKWFSRSERGTWVSFWNCSHNVGGGLLPPLVLFGIAELYSWHWVFIVPGIIAI 161 (379)
T ss_pred hHHHHHHHHHHHHhhccccCCchHHHHHHhcCHhhheeeEeehhccchhHHHHHHHHHHHHHHhcCCchhHHHHHHHHHH
Confidence 7899999999999999999999999999999999999999999999999999999 577777778899999999888776
Q ss_pred HHHHHH-HhhccCCcCcCCCCCcchhhhhhhhhhhhhHHhhccccCCCcHHHhhhcHHHHHHHHHHHHHHHHHHHHHhhh
Q 014481 281 AWFSGF-KILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLSWL 359 (423)
Q Consensus 281 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 359 (423)
+..+.. ++.+++++.......++..... .+. .....+......+..++.++++|.+|.+.+..++..........+.
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (379)
T TIGR00881 162 IVSLICFLLLRDSPQSCGLPPAEEMPNEE-PDG-DAEKKEEELTKKQIFLQYVLLNKVLWYISLGYVFVYVVRTGILDWS 239 (379)
T ss_pred HHHHHHheeeCCCccccccCccccCcccc-ccc-ccccccccccchHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHH
Confidence 654443 3444433221111110000000 000 0000000001112235677899999998888888888888899999
Q ss_pred hHHHHHhhCCChhhHHHHHHHHHHHHHHHHHHHHHHhHHhhhc
Q 014481 360 PTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIAT 402 (423)
Q Consensus 360 ~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~r 402 (423)
|.|+.+.+|+++.+++.+.....++.+++.++.+++.||..+|
T Consensus 240 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~ 282 (379)
T TIGR00881 240 PLYLTQEKGFSKEKASWAFTLYELGGLVGTLLAGWLSDKLFNG 282 (379)
T ss_pred HHHHHHHhCCCHHHHHHHHHHHHHHcchhHHHHHHHHHHHcCC
Confidence 9999988899999999999999999999999999999987544
No 24
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=99.96 E-value=1.1e-28 Score=230.57 Aligned_cols=269 Identities=28% Similarity=0.424 Sum_probs=217.7
Q ss_pred HHHHHHHHhhhhhhhhhHH-HhhhhhCCCcchhhHHHHHHHHHHHhhhhhhhhHhhHhcCchHHHHHHHHHHHHHHHHHH
Q 014481 120 SLAFVICNMDKVNLSVAII-PMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPL 198 (423)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~ 198 (423)
+++.++..+......+.+| .+.+++|.+..+++++.+++.++..+++++.|+++||+|||++++++.++.+++.++..
T Consensus 2 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~- 80 (352)
T PF07690_consen 2 FLAFFLSGFGFSIISPALPLYLAEELGLSPSQIGLLFSAFFLGSALFSPFAGYLSDRFGRRRVLIIGLLLFALGSLLLA- 80 (352)
T ss_dssp HHHHHHHHHHHHHHHHHHH-HHHCCSTTTSHCHHHHHHHHHHHHHHHHHHHHHHHHHS-HHHHHHHHHHHHHHHHHHHH-
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCeeeEeehhhhhhhHHHHhh-
Confidence 4566777788888889999 89999999999999999999999999999999999999999999999999998855553
Q ss_pred hhhHHHHHHHHHHHHHhhcccchHhHHHHHHhcCCCCchhhHHHHHHhhhhhHHHHHHhhHHHhhhccCchHHHHHHHHH
Q 014481 199 LAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLL 278 (423)
Q Consensus 199 ~~~~~~~~~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~~~~~~~~ 278 (423)
++++.+.++++|++.|++.+...+...+++.|++|+++|++++++.+.+..+|.++||.+++.+.+..|||+.|++.+++
T Consensus 81 ~~~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~~~~~~~~~~~~~ 160 (352)
T PF07690_consen 81 FASNFWLLLIARFLLGIGSGFFSPASNALIADWFPPEERGRAFGILSAGFSLGSILGPLLGGFLISYFGWRWAFLISAIL 160 (352)
T ss_dssp HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCTCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHCHHCCHHHHHHHH
T ss_pred hhhhHHHHhhhccccccccccccccccccccccchhhhhhhccccccchhhhhhhcccchhhhhhhccccccccccccch
Confidence 44556799999999999999999999999999999999999999999999999999999999999889999999999999
Q ss_pred HHHHHHHH-HhhccCCcCcCCCCCcchhhhhhhhhhhhhHHhhccccCCC-cHHHhhhcHHHHHHHHHHHHHHHHHHHHH
Q 014481 279 GIAWFSGF-KILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDV-PWKAIFRSKAVWAMIYAHFCGSWGHYTCL 356 (423)
Q Consensus 279 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 356 (423)
.++..++. ++++++++++..+.+.++. . +.+.+.. .++.+++++.+|...+..++.........
T Consensus 161 ~~~~~il~~~~~~~~~~~~~~~~~~~~~-~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (352)
T PF07690_consen 161 SLIAAILFILFLPEPPPPRERESPKESE-S-------------KKPKPLKPGFKSLFKNPVLWILLIAFFLFFFVFSGFS 226 (352)
T ss_dssp HHHHHHHHHCCC---STTTT--SSTTTT----------------HHHCCCH-CTHHHHHHCCHHHHHHHHHHHHHHHHHH
T ss_pred hhhhhhhHhhhhhhcccccccccccccc-c-------------ccccccccccccccccchhhhhhhhhhHHHHHHHHhh
Confidence 88876543 3444443333222221110 0 0000011 25677788877756666666666778889
Q ss_pred hhhhHHHHHhhCCC-hhhHHHHHHHHHHHHHHHHHHHHHHhHHhhhcC
Q 014481 357 SWLPTYFSEELSLN-LTEAAWVSILPPLASVLVTSIAAQFADNLIATG 403 (423)
Q Consensus 357 ~~~~~~~~~~~g~s-~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~r~ 403 (423)
.++|.|+.+.+|++ ..+.+.+..+..++++++.++.|++.||+++|+
T Consensus 227 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 274 (352)
T PF07690_consen 227 FFLPLYLQEVLGFSGPSQAGLLFSIFGIVGIIGSLLAGRLSDRFGRRR 274 (352)
T ss_dssp HHHHHHCCHHHHCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHH
T ss_pred cccchhhhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHH
Confidence 99999988889999 889999999999999999999999999988753
No 25
>PRK10091 MFS transport protein AraJ; Provisional
Probab=99.96 E-value=9.7e-28 Score=226.68 Aligned_cols=263 Identities=16% Similarity=0.253 Sum_probs=217.0
Q ss_pred HHHHHHHHHHHHHhhhhhhhhhHHHhhhhhCCCcchhhHHHHHHHHHHHhhhhhhhhHhhHhcCchHHHHHHHHHHHHHH
Q 014481 115 LIGTTSLAFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATA 194 (423)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~ 194 (423)
.+..+.+..+..........+.+|.+.+++|.+..+.|++.+.+.+++.++++++|+++||+|||+++.++.++.+++.+
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~ 83 (382)
T PRK10091 4 VILSLALGTFGLGMAEFGIMGVLTELAHDVGISIPAAGHMISYYALGVVVGAPIIALFSSRYSLKHILLFLVALCVIGNA 83 (382)
T ss_pred hHHHHHHHHHHHHhhHHHHHhChHHHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHHccCccHHHHHHHHHHHHHHHH
Confidence 34556667777778888888999999999999999999999999999999999999999999999999999999999887
Q ss_pred HHHHhhhHHHHHHHHHHHHHhhcccchHhHHHHHHhcCCCCchhhHHHHHHhhhhhHHHHHHhhHHHhhhccCchHHHHH
Q 014481 195 LLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYI 274 (423)
Q Consensus 195 ~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~~~~ 274 (423)
++ ..+++++.+++.|++.|++.+...+....++.+++++++|+++++++..+..+|..+||++++.+.+..|||+.|++
T Consensus 84 l~-~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gwr~~f~~ 162 (382)
T PRK10091 84 MF-TLSSSYLMLAIGRLVSGFPHGAFFGVGAIVLSKIIKPGKVTAAVAGMVSGMTVANLLGIPLGTYLSQEFSWRYTFLL 162 (382)
T ss_pred HH-HHhCcHHHHHHHHHHHHhhhHHHHHHHHHHHHHhCChHHhhHHHHHHHHHHHHHHHHhccHHHHHhhhccHHHHHHH
Confidence 76 56778899999999999999988888889999999989999999999999999999999999999998999999999
Q ss_pred HHHHHHHHHHH-HHhhccCCcCcCCCCCcchhhhhhhhhhhhhHHhhccccCCCcHHHhhhcHHHHHHHHHHHHHHHHHH
Q 014481 275 FGLLGIAWFSG-FKILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHY 353 (423)
Q Consensus 275 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 353 (423)
.+++.++..+. .+.+|+.+++.+ .+. + ...+.++++..|......++.....+
T Consensus 163 ~~~~~~~~~~~~~~~lp~~~~~~~----~~~-----~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (382)
T PRK10091 163 IAVFNIAVLASIYFWVPDIRDEAK----GGL-----R-----------------EQFHFLRSPAPWLIFAATMFGNAGVF 216 (382)
T ss_pred HHHHHHHHHHHHHHhCCCCCcccc----cCH-----H-----------------HHHHHhcChHHHHHHHHHHHHHHHHH
Confidence 88877665443 334444321100 000 0 01245677777766655555555555
Q ss_pred HHHhhhhHHHHHhhCCChhhHHHHHHHHHHHHHHHHHHHHHHhHHhhhcCC
Q 014481 354 TCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGV 404 (423)
Q Consensus 354 ~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~r~~ 404 (423)
....+++.|+.+.+|+++.+.+++.....++.++++++.+++.||+++|+.
T Consensus 217 ~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~~r~~~~~~ 267 (382)
T PRK10091 217 AWFSYIKPYMMFISGFSETSMTFIMMLVGLGMVLGNLLSGRLSGRYSPLRI 267 (382)
T ss_pred HHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHhHHHheeccccCchhH
Confidence 566677888887789999999999999999999999999999999998754
No 26
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.96 E-value=2.7e-27 Score=230.59 Aligned_cols=280 Identities=20% Similarity=0.161 Sum_probs=208.0
Q ss_pred HHHHHHHHHHHHHHHhhhhhhhhhHHHhhhhhCCCcch-hhH-----HHHHHHHHHHhhhhhhhhHhhHhcCchHHHHHH
Q 014481 113 YKLIGTTSLAFVICNMDKVNLSVAIIPMSHRFGWNSSV-AGL-----VQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGV 186 (423)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~-~~~-----~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~ 186 (423)
++.+....++.++.+++...++...|.+.++++.+... .++ +.++..+++.++++++|+++||+|||+++.++.
T Consensus 15 ~~~~~~~~~g~~~~~~d~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~Grr~~l~~~~ 94 (490)
T PRK10642 15 RKAITAASLGNAMEWFDFGVYGFVAYALGKVFFPGADPSVQMIAALATFSVPFLIRPLGGLFFGMLGDKYGRQKILAITI 94 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHH
Confidence 35666778899999999999999999999998644322 222 247778999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhhHHH--------HHHHHHHHHHhhcccchHhHHHHHHhcCCCCchhhHHHHHHhhhhhHHHHHHhh
Q 014481 187 LIWSLATALLPLLAGFMP--------GLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLL 258 (423)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~--------~~~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~ 258 (423)
++++++.++++ ++++++ .++++|+++|++.|+.++...++++|++|+++|+++.++...+..+|..+|+.+
T Consensus 95 ~l~~i~~~~~a-~~~~~~~~g~~a~~~l~~~R~l~G~g~g~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~G~~lg~~~ 173 (490)
T PRK10642 95 VIMSISTFCIG-LIPSYATIGIWAPILLLLCKMAQGFSVGGEYTGASIFVAEYSPDRKRGFMGSWLDFGSIAGFVLGAGV 173 (490)
T ss_pred HHHHHHHHHHH-hcccHHHHHHHHHHHHHHHHHHHHhHhHhhHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHH
Confidence 99999998884 555554 388999999999999999999999999999999999999998888888888876
Q ss_pred HHHhh--------hccCchHHHHHHHHHHHHHHHHHHhhccCCcCcCCCCCcchhhhhhhhhhhhhHHhhccccCCCcHH
Q 014481 259 APPII--------ENLGWESVFYIFGLLGIAWFSGFKILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWK 330 (423)
Q Consensus 259 ~~~l~--------~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 330 (423)
...+. ..+|||+.|++.+++.++.+++...++|++.......+.+ +.. .+...+.+..+++
T Consensus 174 ~~~~~~~~~~~~~~~~gWR~~f~i~~~~~l~~~~~~~~~~esp~~~~~~~~~~-------~~~----~~~~~~~~~~~~~ 242 (490)
T PRK10642 174 VVLISTIVGEANFLDWGWRIPFFIALPLGIIGLYLRHALEETPAFQQHVDKLE-------QGD----REGLQDGPKVSFK 242 (490)
T ss_pred HHHHHHhcCHHHhcCccHHHHHHHHHHHHHHHHHHHHcCCCChhHHHHHHhhh-------hhc----cccccccccCCHH
Confidence 65443 2579999999977666554444445555433211000000 000 0000011233466
Q ss_pred Hhhhc-HHHHHH-HHHHHHHHHHHHHHHhhhhHHHHHhhCCChhhHHHHHHHHHHHHHHHHHHHHHHhHHhhhcCC
Q 014481 331 AIFRS-KAVWAM-IYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGV 404 (423)
Q Consensus 331 ~~~~~-~~~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~r~~ 404 (423)
+++++ +..+.. ....++....++.+..|+|.|+++.+|++..+.++......++.+++.++.|+++||+|||+.
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~ 318 (490)
T PRK10642 243 EIATKHWRSLLTCIGLVIATNVTYYMLLTYMPSYLSHNLHYSEDHGVLIIIAIMIGMLFVQPVMGLLSDRFGRRPF 318 (490)
T ss_pred HHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHH
Confidence 66653 333322 233344556778888999999988789998888888888889999999999999999998854
No 27
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=99.96 E-value=3.8e-27 Score=224.69 Aligned_cols=274 Identities=17% Similarity=0.155 Sum_probs=224.3
Q ss_pred chhHHHHHHHHHHHHHHHhhhhhhhhhHHHhhhhhCCCcchhhHHHHHHHHHHHhhhhhhhhHhhHhcCchHHHHHHHHH
Q 014481 110 PQRYKLIGTTSLAFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIW 189 (423)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~ 189 (423)
++.+.....+.+..++..+....+.+.+|.+.+++|.+..+.++..+.+.+++.+++++.|+++||+|||++++++.++.
T Consensus 9 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~~ 88 (406)
T PRK15402 9 RQALLFPLCLVLFEFATYIANDMIQPGMLAVVEDFNAGAEWVPTSMTAYLAGGMFLQWLLGPLSDRIGRRPVMLAGVAFF 88 (406)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhhHhcchHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHH
Confidence 34555666677777777888888889999999999999999999999999999999999999999999999999999888
Q ss_pred HHHHHHHHHhhhHHHHHHHHHHHHHhhcccchHhHHHHHHhcCCCCchhhHHHHHHhhhhhHHHHHHhhHHHhhhccCch
Q 014481 190 SLATALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWE 269 (423)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~ 269 (423)
+++.+++ ...++++.+++.|++.|++.+...+...+++.|++|+++|++++++......+|..+||.+++.+.+..+||
T Consensus 89 ~~~~~~~-~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~~w~ 167 (406)
T PRK15402 89 ILTCLAI-LLAQSIEQFTLLRFLQGIGLCFIGAVGYAAIQESFEEADAIKITALMANVALLAPLLGPLVGAALIHVLPWR 167 (406)
T ss_pred HHHHHHH-HHHccHHHHHHHHHHHHhHhhhHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcc
Confidence 8888776 456778889999999999999888889999999999999999999999888999999999999999988999
Q ss_pred HHHHHHHHHHHHHHHHHH-hhccCCcCcCCCCCcchhhhhhhhhhhhhHHhhccccCCCcHHHhhhcHHHHHHHHHHHHH
Q 014481 270 SVFYIFGLLGIAWFSGFK-ILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCG 348 (423)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 348 (423)
+.|++.+++.++..+..+ ..|+++++...+ ... +. . ..+++.++++|.++...+..++.
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~----~~---~---------~~~~~~~~~~~~~~~~~~~~~~~ 227 (406)
T PRK15402 168 GMFVLFAALAALSFFGLWRAMPETAGRVGEK----LSL----KE---L---------GRDYKLVLKNRRFVAGALALGLV 227 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCCCcccccc----ccH----HH---H---------HHHHHHHHcCcHHHHHHHHHHHH
Confidence 999998888776654433 344432211100 000 00 0 01246788999998888777777
Q ss_pred HHHHHHHHhhhhHHHHHhhCCChhhHHHHHHHHHHHHHHHHHHHHHHhHHhhhcCC
Q 014481 349 SWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGV 404 (423)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~r~~ 404 (423)
.........+.|.|+.+.+|+++.+.+.......++.+++.++.+++.||+++|+.
T Consensus 228 ~~~~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~~r~~~~~~ 283 (406)
T PRK15402 228 SLPLLAWIALSPVILISGEQLSSYEYGLLQVPVFGALIAGNLTLARLTSRRPLRSL 283 (406)
T ss_pred HHHHHHHHHHhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHH
Confidence 66666777788999888889999999988888888899999999999999998754
No 28
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=99.96 E-value=4.1e-27 Score=224.16 Aligned_cols=261 Identities=18% Similarity=0.224 Sum_probs=215.4
Q ss_pred HHHHHHHHHHhhhhhhhhhHHHhhhhhCCCcchhhHHHHHHHHHHHhhhhhhhhHhhHhcCchHHHHHHHHHHHHHHHHH
Q 014481 118 TTSLAFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLP 197 (423)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~ 197 (423)
.+.+..++..+......+.+|.+.+++|.+..+.++..+++.+++.++++++|+++||+|||++++.+.++++++.+++
T Consensus 20 ~~~~~~~~~~~~~~~~~p~l~~i~~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~- 98 (413)
T PRK15403 20 ALILYDFAAYLTTDLIQPGIINVVRDFNADVSLAPASVSLYLAGGMALQWLLGPLSDRIGRRPVLITGALIFTLACAAT- 98 (413)
T ss_pred HHHHHHHHHHHHHHhhccCHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhHHHHHcCchHHHHHHHHHHHHHHHHH-
Confidence 3444555666778888999999999999999999999999999999999999999999999999999999998888777
Q ss_pred HhhhHHHHHHHHHHHHHhhcccchHhHHHHHHhcCCCCchhhHHHHHHhhhhhHHHHHHhhHHHhhhccCchHHHHHHHH
Q 014481 198 LLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGL 277 (423)
Q Consensus 198 ~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~~~~~~~ 277 (423)
..+++++.++++|+++|++.+...+....++.|++++++|+++++++.....+|..+||++++.+.+..|||+.|++.++
T Consensus 99 ~~a~~~~~l~~~r~l~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lg~~l~~~~gw~~~f~~~~~ 178 (413)
T PRK15403 99 LFTTSMTQFLIARFIQGTSICFIATVGYVTVQEAFGQTKGIKLMAIITSIVLVAPIIGPLSGAALMHFVHWKVLFAIIAV 178 (413)
T ss_pred HHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHH
Confidence 46778899999999999998876777788899999999999999999999999999999999999988899999999988
Q ss_pred HHHHHHHH-HHhhccCCcCcCCCCCcchhhhhhhhhhhhhHHhhccccCCCcHHHhhhcHHHHHHHHHHHHHHHHHHHHH
Q 014481 278 LGIAWFSG-FKILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCL 356 (423)
Q Consensus 278 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 356 (423)
+.++..+. .+.+||++++++++ ... .. . ...++++++||.+|...+..++.....+.+.
T Consensus 179 ~~~i~~~~~~~~lp~~~~~~~~~---~~~----~~----~---------~~~~~~ll~~~~~~~~~l~~~~~~~~~~~~~ 238 (413)
T PRK15403 179 MGLIAFVGLLLAMPETVKRGAVP---FSA----KS----V---------LRDFRNVFRNRLFLTGAATLSLSYIPMMSWV 238 (413)
T ss_pred HHHHHHHHHHHhCCCCccccCCC---CCh----HH----H---------HHHHHHHHcCHHHHHHHHHHHHHHHHHHHHH
Confidence 87766544 34456543321110 000 00 0 0125788999999998888888888888888
Q ss_pred hhhhHHHHHhhCCChhhHHHHHHHHHHHHHHHHHHHHHHhHHh
Q 014481 357 SWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNL 399 (423)
Q Consensus 357 ~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~ 399 (423)
.+.|.++++.+|+++.+.++.......+.+++..+.+++.++.
T Consensus 239 ~~~P~~l~~~~g~s~~~~gl~~~~~~~~~~i~~~l~~~~~~~~ 281 (413)
T PRK15403 239 AVSPVILIDAGGMTTSQFAWTQVPVFGAVIVANAIVARFVKDP 281 (413)
T ss_pred HhChHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccC
Confidence 8899999998899999999988888888888877777766443
No 29
>PRK12307 putative sialic acid transporter; Provisional
Probab=99.96 E-value=3.3e-27 Score=226.66 Aligned_cols=281 Identities=19% Similarity=0.240 Sum_probs=216.7
Q ss_pred hhHHHHHHHHHHHHHHHhhhhhhhhhHHHhhhhhCCCcchhhHHHHHHHHHHHhhhhhhhhHhhHhcCchHHHHHHHHHH
Q 014481 111 QRYKLIGTTSLAFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWS 190 (423)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~ 190 (423)
.+++.+....+.++...++.....+..|.+.+++|+++.+.+++.+++.++..+++++.|+++||+|||++++++.++.+
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~~~~~~~~~~~l~~~~~g~l~dr~g~r~~l~~~~~~~~ 94 (426)
T PRK12307 15 PQKNALFSAWLGYVFDGFDFMLIFYIMYLIKADLGLTDMEGAFLATAAFIGRPFGGALFGLLADKFGRKPLMMWSIVAYS 94 (426)
T ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHH
Confidence 34566777888888888999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhhHHHHHHHHHHHHHhhcccchHhHHHHHHhcCCCCchhhHHHHHHhhhhhHHHHHHhhHHHhhhccCchH
Q 014481 191 LATALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWES 270 (423)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~ 270 (423)
++.++. ...++++.++++|++.|++.+...+....++.|++|+++|++++++...+..+|.++++.+.+.+.+..|||+
T Consensus 95 ~~~~~~-~~~~~~~~l~~~r~l~G~g~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~~~~l~~~l~~~~~w~~ 173 (426)
T PRK12307 95 VGTGLS-GLASGVIMLTLSRFIVGMGMAGEYACASTYAVESWPKHLKSKASAFLVSGFGIGNIIAAYFMPSFAEAYGWRA 173 (426)
T ss_pred HHHHHH-HHHhHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCHhHhhHhhhHHHHHHhHHHHHHHHHHHHHcccCCHHH
Confidence 988777 4667789999999999999999999999999999999999999999999999999999999999998899999
Q ss_pred HHHHHHHHHHHHHHHHHhhccCCcCcCCCCCcchhhhhhhhhhhhhHHhhccccCCCcHHHhhhcHHHHHHHHHHH---H
Q 014481 271 VFYIFGLLGIAWFSGFKILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHF---C 347 (423)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~---~ 347 (423)
.|++.++..++........|++++....+...+. + ..+.........++++++++.++...+... .
T Consensus 174 ~f~i~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~------~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (426)
T PRK12307 174 AFFVGLLPVLLVIYIRARAPESKEWEEAKLSGKG------K-----HSQSAWSVFSLSMKGLFNRAQFPLTLCVFIVLFS 242 (426)
T ss_pred HHHHHHHHHHHHHHHHHHCCCChHHHHhhhhccc------c-----ccccchhhhhHHHHHHHhhchHHHHHHHHHHHHH
Confidence 9987544333322221122222111000000000 0 000000001124677888887765443322 2
Q ss_pred HHHHHHHHHhhhhHHHHHhhCCChhhHHHHHHHHHHHHHHHHHHHHHHhHHhhhcCC
Q 014481 348 GSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGV 404 (423)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~r~~ 404 (423)
.....+.+..++|.|+++ .|+++.+.+.+.+...++.++++++.|++.||+++|+.
T Consensus 243 ~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~ 298 (426)
T PRK12307 243 IFGANWPIFGLLPTYLAG-EGFDTGVVSNLMTAAAFGTVLGNIVWGLCADRIGLKKT 298 (426)
T ss_pred HHHHHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHH
Confidence 233334467789999987 59999999999999999999999999999999998753
No 30
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=99.96 E-value=1.2e-27 Score=224.98 Aligned_cols=275 Identities=17% Similarity=0.175 Sum_probs=212.6
Q ss_pred HHHHHHHHHHhhhhhhhhhHHH-hhhhhCCCcchhhHHHHHHHHHHHhhhhhhhhHhhHhcCchHHHHHHHHHHHHHHHH
Q 014481 118 TTSLAFVICNMDKVNLSVAIIP-MSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALL 196 (423)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~ 196 (423)
..++++++.........+..|. +.+++|++..+.+++.+++.+++.+++++.|+++||+|||+.++++.++.+++.+++
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~i~~~~~ 84 (366)
T TIGR00886 5 FSWFGFFLSFSVWFAFSPLAVQMIKDDLGLSTAQLGNLVAVPVLAGAVLRIILGFLVDKFGPRYTTTLSLLLLAIPCLWA 84 (366)
T ss_pred HHHHHHHHHHHHHHHhHHhhhHHHHHHhCCCHHHhhHhhHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHH
Confidence 4666677777888889999995 899999999999999999999999999999999999999999999999999988777
Q ss_pred HHhhh-HHHHHHHHHHHHHhhcccchHhHHHHHHhcCCCCchhhHHHHHHhhhhhHHHHHHhhHHHhhh----------c
Q 014481 197 PLLAG-FMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIE----------N 265 (423)
Q Consensus 197 ~~~~~-~~~~~~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~----------~ 265 (423)
. ..+ +++.+++.|++.|++.+. .+...+++++++|+++|++++++...+.++|..+++.+++.+.. .
T Consensus 85 ~-~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~~~ 162 (366)
T TIGR00886 85 G-LAVQSYSVLLLLRLFIGIAGGS-FASCMPWISFFFPKKIQGTALGLAAGWGNMGGGVAQFVMPPIIGSLIFGAGLPAH 162 (366)
T ss_pred H-HHhhhHHHHHHHHHHHHHhchh-hHhHHHHHHHhcCHhhhhHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhccccccc
Confidence 4 455 788999999999998654 56678999999999999999999998888888888888776654 2
Q ss_pred cCchHHHH-HHHHHHHHH-HHHHHhhccCCcCcCCCCCcchhhhhhhhhhhhhHHhhccccCCCcHHHhhhcHHHHHHHH
Q 014481 266 LGWESVFY-IFGLLGIAW-FSGFKILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIY 343 (423)
Q Consensus 266 ~gw~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 343 (423)
.+||+.|+ +.+++..+. .+...+.+++++.+.++.+.+.+.. ... .+.......++.+++|.++...+
T Consensus 163 ~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~--------~~~~~~~~~~~~~~~~~~~~~~~ 232 (366)
T TIGR00886 163 LAWGWAFVIVPAGILLLPALLIFFVGADTPPGKPATGKLSFKGA--RWS--------VGTGALGDQLKVFRDRHTWILAL 232 (366)
T ss_pred ccccchhHHHHHHHHHHHHHHHHHhcccCCcccccchhcccccc--ccc--------ccchhHHHHHHHHhccchhhHHH
Confidence 48999994 445554443 3333344443322111100000000 000 00000013467788899988888
Q ss_pred HHHHHHHHHHHHHhhhhHHHHHhhCCChhhHHHHHHHHHHHHHHHHHHHHHHhHHhhhcCC
Q 014481 344 AHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGV 404 (423)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~r~~ 404 (423)
..++..........+.|.|+++.+|+++.+++.+..+..+++++++++.|++.||+++|+.
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~g~~~~ 293 (366)
T TIGR00886 233 LYSVTFGSFLGVSSIFAMFFKDQFGLSKVTAGAYASLGGLLGSLARPLGGAISDRLGGARK 293 (366)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHhhccchHHHhhccchh
Confidence 8887777788888999999998899999999999999999999999999999999998754
No 31
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=99.96 E-value=1.6e-27 Score=230.11 Aligned_cols=288 Identities=16% Similarity=0.244 Sum_probs=213.1
Q ss_pred hHHHHHHHHHHHHHHHhhhhhhhhhHHHhhhhhCCCcchhhHHHHHHHHHHHhhhhhhhhHhhHhcCchHHHHHHHHHHH
Q 014481 112 RYKLIGTTSLAFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSL 191 (423)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~ 191 (423)
+|..+...++.....+++...+....|.+.++ |++..+.+++.+.+.+++.+++++.|+++||+|||++++++.++.++
T Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~-g~s~~~~g~~~~~~~i~~~~~~~~~G~l~Dr~g~k~~l~~~~~~~~i 105 (452)
T PRK11273 27 RWQIFLGIFFGYAAYYLVRKNFALAMPYLVEQ-GFSRGDLGFALSGISIAYGFSKFIMGSVSDRSNPRVFLPAGLILAAA 105 (452)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHc-CCCHHHHHHHHHHHHHHHHHHHhhhhhhhhccCCchhHHHHHHHHHH
Confidence 45555555566666666666677788888888 99999999999999999999999999999999999999999999888
Q ss_pred HHHHHHHhh---hHHHHHHHHHHHHHhhcccchHhHHHHHHhcCCCCchhhHHHHHHhhhhhHHH-HHHhhHHHhhhccC
Q 014481 192 ATALLPLLA---GFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSV-AGLLLAPPIIENLG 267 (423)
Q Consensus 192 ~~~~~~~~~---~~~~~~~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~-~g~~~~~~l~~~~g 267 (423)
+.++++... .+++.+++.|++.|++.+...+.....+.+++|+++|++++++++.+..+|.. ++|+++..+....|
T Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~l~gi~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~g 185 (452)
T PRK11273 106 VMLFMGFVPWATSSIAVMFVLLFLCGWFQGMGWPPCGRTMVHWWSQKERGGIVSVWNCAHNVGGGLPPLLFLLGMAWFND 185 (452)
T ss_pred HHHHHHhhhcccccHHHHHHHHHHHHHHHhccchHHHHHHHHhCChHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHhcc
Confidence 887664332 35678889999999999988888888999999999999999999999999864 55655444444459
Q ss_pred chHHHHHHHHHHHHH-HHHHHhhccCCcCcCCCCCcchhhhhhhhhhhhhHHhhccccCCCcHHHhhhcHHHHHHHHHHH
Q 014481 268 WESVFYIFGLLGIAW-FSGFKILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHF 346 (423)
Q Consensus 268 w~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 346 (423)
||+.|++.+++.++. ++..++++++++....+..++.+. ...+.. ...++.+.+.++.-.+.+++++.+|...+..+
T Consensus 186 w~~~f~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 263 (452)
T PRK11273 186 WHAALYMPAFAAILVALFAFAMMRDTPQSCGLPPIEEYKN-DYPDDY-NEKHEQELTAKQIFMQYVLPNKLLWYIAIANV 263 (452)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHccCCHhhcCCCChhhhhh-cccccc-ccccCCCccHHHHHHHHHHcChHHHHHHHHHH
Confidence 999999988877665 444455555443211110000000 000000 00000000000000124678999999888888
Q ss_pred HHHHHHHHHHhhhhHHHHHhhCCChhhHHHHHHHHHHHHHHHHHHHHHHhHHhhhc
Q 014481 347 CGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIAT 402 (423)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~r 402 (423)
+.....++...++|.|+++..|++..+++.+..+..++.+++.++.|+++||++++
T Consensus 264 ~~~~~~~~~~~~~P~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~G~l~dr~~~~ 319 (452)
T PRK11273 264 FVYLLRYGILDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFRG 319 (452)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccC
Confidence 88888888899999999988899999999988899999999999999999999543
No 32
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.96 E-value=3e-28 Score=231.05 Aligned_cols=285 Identities=19% Similarity=0.296 Sum_probs=230.5
Q ss_pred HHHHHHHHHHHHHHHhhhhhhhhh-HHHhhhhhCCCcchhhHHHHHHHHHHHhhhhhhhhHhhHhcCchHHHHHHHHHHH
Q 014481 113 YKLIGTTSLAFVICNMDKVNLSVA-IIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSL 191 (423)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~ 191 (423)
..++..+++.++..+.+...++.. +..+.+|.+....+.+.+.+++.++++++.+++|.+.||++..+.+....+++++
T Consensus 44 l~i~~~~~~~y~~~~~d~~si~~a~l~g~~edl~~~~~~l~~~~t~F~v~Yii~~~p~~~L~~r~~ls~~l~~~~~~w~~ 123 (495)
T KOG2533|consen 44 LFILPFLCYLYFHAYLDKSSIVNASLSGLKEDLKLVGNQLGVLDTVFYVGYIIGQFPSGLLGDRFPLSKGLSVSGILWGL 123 (495)
T ss_pred HHHHHHHHHHHHHHhcchhcchhHHHcCCccccchhhhhhhhHHHHHHHHHHHHHhhHHHHHHhCChHHHHHHHHHHHHH
Confidence 345556666667777776555543 4447799999999999999999999999999999999999988888888888888
Q ss_pred HHHHHHHhhhHHHHHHHHHHHHHhhcccchHhHHHHHHhcCCCCchhhHHHHHHhhhhhHHHHHHhhHHHhh------hc
Q 014481 192 ATALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPII------EN 265 (423)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~------~~ 265 (423)
..++.. ..++++.+++.|++.|+..+..+|....+++.|+.+++|+..+|++.+..++|.++|.+++..+. ..
T Consensus 124 ~~~~~~-~~~s~~~~ialr~llGl~es~~wP~~~~~lg~wy~~~e~g~r~~~~~a~~~~g~i~ggliA~g~~~~~~~~~~ 202 (495)
T KOG2533|consen 124 FGFLTA-AVHSFPGLIALRFLLGLFESGGWPGVVAILGNWYGKSERGLRMGIWYASASLGNIFGGLIAYGVFKLNGSGGL 202 (495)
T ss_pred HHHHHH-HHhhhHHHHHHHHHHHHHhcccchHHHHHHHhhcChhhhhhhHHHHHHhcchhhHHHHHHHHHhhhhcCCCCc
Confidence 776664 47888999999999999999999999999999999999999999999999999999999998863 34
Q ss_pred cCchHHHHHHHHHHHHHHHHH-HhhccCCcCcCCCCCcchhhhhhhhhhhhhHHhhccccCCCcHHHhhhcHHHHHHHHH
Q 014481 266 LGWESVFYIFGLLGIAWFSGF-KILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYA 344 (423)
Q Consensus 266 ~gw~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 344 (423)
.||||.|++.+++.++..++. +++|+.+. +..-.+++++....++..........++.+...+++.+++|.+|.+++.
T Consensus 203 ~gW~~~FiI~G~i~~~~gi~~f~~lp~~P~-~~~fl~~~ek~~~~~~~~~~~~~~~~~~~~~~~~~~a~~dp~vw~~~l~ 281 (495)
T KOG2533|consen 203 AGWRWLFIIEGVITLVLGIVVFFFLPDNPS-KAWFLTDEEKELVVERLRESPSGGIENKFKWKGFKEALKDPGVWPFSLC 281 (495)
T ss_pred CCceeehhHHHHHHHHHHheEEEEecCChh-hccccchHHHHHHHHHHHhccCCCcccccCHHHHHHHHhchhHHHHHHH
Confidence 689999999999998875554 45555444 2233333332222111111111111122455667889999999999999
Q ss_pred HHHHHHHHHHHHhhhhHHHHHhhCCChhhHHHHHHHHHHHHHHHHHHHHHHhHHh
Q 014481 345 HFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNL 399 (423)
Q Consensus 345 ~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~ 399 (423)
.++.....+++.+|+|.|+++..|++..+++.+..+..++++++.+++|+++||+
T Consensus 282 ~~~~~lv~~~~~~~lpl~l~~~~~~s~~~a~~ls~~~~~~g~v~~i~ag~lsdr~ 336 (495)
T KOG2533|consen 282 YFFLKLVNYGFSYWLPLYLKSNGGYSELQANLLSTPYDVGGIVGLILAGYLSDRL 336 (495)
T ss_pred HHHHhhccccHHHHHHHHHHcCCCcChHHhccccchHHhhhHHHHHHHHHHHHHH
Confidence 9999999999999999999986679999999999999999999999999999995
No 33
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.96 E-value=2.3e-27 Score=223.71 Aligned_cols=259 Identities=18% Similarity=0.221 Sum_probs=208.4
Q ss_pred HHHhhhhhhhhhHHHhhhhhCCCcchhhHHHHHHHHHHHhhhhhhhhHhhHhcCchHHHHHHHHHHHHHHHHHHhhhHHH
Q 014481 125 ICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPLLAGFMP 204 (423)
Q Consensus 125 ~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (423)
+........++..|.+.+++|++..+.|++.+++.+++.+++++.|+++||+|||+++.++.++.+++.+++ ...++++
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~d~~G~r~~~~~~~~~~~~~~~~~-~~~~~~~ 92 (377)
T TIGR00890 14 FTSGYVYTWTLLAPPLGRYFGVGVTAVAIWFTLLLIGLAMSMPVGGLLADKFGPRAVAMLGGILYGLGFTFY-AIADSLA 92 (377)
T ss_pred HHhhHHhhhhhHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHcCccchhHHhHHHHHHHHHHH-HHHHHHH
Confidence 333446677888999999999999999999999999999999999999999999999999999999988776 5677889
Q ss_pred HHHHHHHHHHhhcccchHhHHHHHHhcCCCCchhhHHHHHHhhhhhHHHHHHhhHHHhhhccCchHHHHHHHHHHHHHHH
Q 014481 205 GLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAWFS 284 (423)
Q Consensus 205 ~~~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~~~~~~~~~~~~~~ 284 (423)
.++++|++.|++.+...+.....+.+++| ++|+++.++...+..+|..+++++.+.+.+..|||+.|++.+++.++..+
T Consensus 93 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~ 171 (377)
T TIGR00890 93 ALYLTYGLASAGVGIAYGIALNTAVKWFP-DKRGLASGIIIGGYGLGSFILSPLITSVINLEGVPAAFIYMGIIFLLVIV 171 (377)
T ss_pred HHHHHHHHHhHHHHHHHHhHHHHHHHHcC-cccHHHHHHHHHhcchhHhHHHHHHHHHHhcccHHHHHHHHHHHHHHHHH
Confidence 99999999999999888888888999987 68999999999999999988887877888888999999999988877655
Q ss_pred HHHhhccCCcCcCCCCCcchhhhhhhhhhhhhHHhhccccCCCcHHHhhhcHHHHHHHHHHHHHHHHHHHHHhhhhHHHH
Q 014481 285 GFKILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLSWLPTYFS 364 (423)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 364 (423)
..+++.++++++..+.+.+. ..+...+++.++++.++...+..++..........+.+.|.+
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (377)
T TIGR00890 172 LGAFLIGYPPGQLIKTNIEV------------------SVKDYTVWEMLRTPQFWVLYLSFFLNAVSGLLLIGLYKPYGQ 233 (377)
T ss_pred HHHHheecCchhccccCccc------------------chhhhhHHHHHcCccHHHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 54444332222111100000 000112467788888888777777766666666677777775
Q ss_pred HhhCCChhhHHHHHHHHHHHHHHHHHHHHHHhHHhhhcCC
Q 014481 365 EELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGV 404 (423)
Q Consensus 365 ~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~r~~ 404 (423)
+ +|.+..+.+.+.....++.++++++.|++.||++||+.
T Consensus 234 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~ 272 (377)
T TIGR00890 234 S-LGLSDGFLVLAVSISSIFNGGGRPFLGALSDKIGRQKT 272 (377)
T ss_pred H-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhh
Confidence 4 78998889999999999999999999999999998854
No 34
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.96 E-value=7.3e-27 Score=222.83 Aligned_cols=272 Identities=23% Similarity=0.324 Sum_probs=218.8
Q ss_pred hhHHHHHHHHHHHHHHHhhhhhhhhhHHHhhhhhCCCcchhhHHHHHHHHHHHhhhhhhhhHhhHhcCchHHHHHHHHHH
Q 014481 111 QRYKLIGTTSLAFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWS 190 (423)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~ 190 (423)
++|..+...++..++..++....+...|.+.+++|.++.+.+++.+.+.++..++.++.|+++||+|||+++.++.++.+
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~ 91 (406)
T PRK11551 12 RLALTIGLCFLVALLEGLDLQSAGVAAPRMAQEFGLDVAQMGWAFSAGILGLLPGALLGGRLADRIGRKRILIVSVALFG 91 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHH
Confidence 46777888888888999999999999999999999999999999999999999999999999999999999999998888
Q ss_pred HHHHHHHHhhhHHHHHHHHHHHHHhhcccchHhHHHHHHhcCCCCchhhHHHHHHhhhhhHHHHHHhhHHHhhhccCchH
Q 014481 191 LATALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWES 270 (423)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~ 270 (423)
++.+++ ...++++.+++.|++.|++.+...+...+++.|++|+++|++++++.+.+..+|..+++.+++.+.+..+|++
T Consensus 92 ~~~~~~-~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 170 (406)
T PRK11551 92 LFSLAT-AQAWDFPSLLVARLLTGVGLGGALPNLIALTSEAVGPRLRGTAVSLMYCGVPFGGALASVIGVLAAGDAAWRH 170 (406)
T ss_pred HHHHHH-HHhccHHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccCHHH
Confidence 887666 4567788999999999999999999999999999999999999999999999999999999998888889999
Q ss_pred HHHHHHHHHHHHHH-HHHhhccCCcCcCCCCCcchhhhhhhhhhhhhHHhhccccCCCcHHHhhh---cHHHHHHHHHHH
Q 014481 271 VFYIFGLLGIAWFS-GFKILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFR---SKAVWAMIYAHF 346 (423)
Q Consensus 271 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~l~~~ 346 (423)
.|++.+++.++..+ ...+++|+++....+..+++. +. ..+..++ .+..+.+.+..+
T Consensus 171 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~-----~~---------------~~~~~~~~~~~~~~~~~~~~~~ 230 (406)
T PRK11551 171 IFYVGGVGPLLLVPLLMRWLPESRAFAQAAGAGKQR-----AP---------------VLRALFGEGRATATLLLWISYF 230 (406)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCChhHHhccCcchhh-----hh---------------hHHHHhhhhhhhHHHHHHHHHH
Confidence 99998876655443 334456544322111000000 00 0111111 223333444445
Q ss_pred HHHHHHHHHHhhhhHHHHHhhCCChhhHHHHHHHHHHHHHHHHHHHHHHhHHhhhcCC
Q 014481 347 CGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGV 404 (423)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~r~~ 404 (423)
+.....+....|+|.|+++ .|+++.+.+.+.....++.++++++.|++.||+++|+.
T Consensus 231 ~~~~~~~~~~~~~p~~~~~-~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~ 287 (406)
T PRK11551 231 FTLIVLYFLLNWLPSLLVG-QGLSRSQAGLVQIAFNIGGALGSLLIGALMDRLRPRRV 287 (406)
T ss_pred HHHHHHHHHHHHHHHHHHh-CCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHH
Confidence 5555666777889999986 69999999999999999999999999999999998744
No 35
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=99.96 E-value=1.7e-29 Score=228.20 Aligned_cols=282 Identities=17% Similarity=0.205 Sum_probs=230.8
Q ss_pred hHHHHHHHHHHHHHHHhhhhhhhhhHHHhhhhhCCCcchhhHHHHHHHHHHHhhhhhhhhHhhHhcCchHHHHHHHHHHH
Q 014481 112 RYKLIGTTSLAFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSL 191 (423)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~ 191 (423)
.++.+.++++..+++..+.+.+...++.+++++|++++..|++.+.+.+.+.+++|++|+++|||.||+++.+|..+|.+
T Consensus 31 ~~~~l~il~~vnlmny~Dr~~iagv~~~v~~~fni~~s~~Gll~~vf~v~~~i~sPl~gyLadryNR~~v~~vG~~iW~~ 110 (493)
T KOG1330|consen 31 PTLTLVILCLVNLMNYADRYTIAGVLKEVQTYFNISDSELGLLQTVFIVVFMIASPLFGYLADRYNRKRVIAVGIFIWTL 110 (493)
T ss_pred chHHHHHHHHHHHHHHhhhhhhhhhhHHHHHhcCCCchhccchhHHHHHHHHHHHHHHHHHHhhcCcceEEeeHHHHHHH
Confidence 45778889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhhHHHHHHHHHHHHHhhcccchHhHHHHHHhcCCCCchhhHHHHHHhhhhhHHHHHHhhHHHhhhccC-chH
Q 014481 192 ATALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLG-WES 270 (423)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g-w~~ 270 (423)
+.+..+ +++.+|++.++|.+.|+|.+...+++.++++|.+|..+|++++++++.+..+|..+|.+++..+.+..+ |||
T Consensus 111 Av~~~~-fs~~Fwq~~l~R~~vGiGeAs~~~ia~s~IaD~f~~~~Rs~~~~ify~~ipvGsglG~vvgs~va~~~~~Wr~ 189 (493)
T KOG1330|consen 111 AVFASG-FSNHFWQVLLCRGFVGIGEASYSPIAPSLIADSFPDDKRSRVLGIFYFAIPVGSGLGYVVGSVVASLTFWWRW 189 (493)
T ss_pred HHHHHH-HHHHHHHHHHHHHHhccchhhhcccchhHhhhcCcchhhhHHHHHhhhhcccccceeEEeeeeeccCccceEE
Confidence 998885 558889999999999999999999999999999999999999999999999999999999999988766 999
Q ss_pred HHHHHHHHHHHHHHHHHhhccCCcCcCCCCCcchhhhhhhhhhhhhHHhhccccCCCcHHHhhhcHHHHHHHHHHHHHHH
Q 014481 271 VFYIFGLLGIAWFSGFKILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSW 350 (423)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 350 (423)
.|++.+++.++++++.+++.++|++...++.+.+... .. .......+.+.+.+++.+....+......+
T Consensus 190 af~~~avl~vi~~~L~~~f~~eP~rga~~~~~~~~~~--~~---------~~ts~~kDl~~l~~~~v~v~~sl~~~a~~f 258 (493)
T KOG1330|consen 190 AFRGSAVLGVIVGLLVFLFVREPERGARDEVDGENKM--VK---------PFTSVWKDLKVLAKIKVFVLSSLGIIAAQF 258 (493)
T ss_pred EEEeehHHHHHHHHHHHhhccCcccccccccccCCcC--CC---------CccchHHHHHHHHccCceeeehHHHHHHHH
Confidence 9999999998876665555444433222211111100 00 000111124556677888777888888888
Q ss_pred HHHHHHhhhhHHHHHh---hCCChhhHHHHHHHHHHHHHHHHHHHHHHhHHhhhcCCc
Q 014481 351 GHYTCLSWLPTYFSEE---LSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVE 405 (423)
Q Consensus 351 ~~~~~~~~~~~~~~~~---~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~r~~~ 405 (423)
....+..|.|.+.... .|.+..+..++..+..+++.+|.+++|.++||+.++..+
T Consensus 259 v~Gs~sww~p~~~~~~~~~~~~~~~~~~ifg~vt~~~G~lGvl~Ggiisd~~~~~~~~ 316 (493)
T KOG1330|consen 259 VIGSLSWWAPAFIYYSYELIGFDHNATLIFGGVTCAGGSLGVLFGGIISDKLSRIFPN 316 (493)
T ss_pred hccccchhhhhHHHHHHHHhCCccccchhhhhHHHhhchhhheehHHHHHHHHHhccc
Confidence 8778777887766533 356666777788889999999999999999998775443
No 36
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=99.96 E-value=1.1e-28 Score=244.69 Aligned_cols=286 Identities=17% Similarity=0.165 Sum_probs=224.0
Q ss_pred HHHHHHHHHHHhhhhhhhhhHHHhhhhhCCCcchhhHHHHHHHHHHHhhhhhhhhHhhHhcCchHHHHHHHHHHHHHHHH
Q 014481 117 GTTSLAFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALL 196 (423)
Q Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~ 196 (423)
+.+.+..+...+........++.+.++|+++..+.|++.+.+.++++++.++.|++.||+|||+++.++.++++++.+++
T Consensus 36 ~~~~~~~~~~~~~~g~~~~~l~~iek~F~lss~~~G~i~s~~~i~~~~~~i~v~~~~~r~~r~~~i~~g~ll~~lg~ll~ 115 (633)
T TIGR00805 36 LLLTCAQLQGLLYNGLVNSSLTTIERRFKLSTSSSGLINGSYEIGNLLLIIFVSYFGTKLHRPIVIGIGCAIMGLGSFLL 115 (633)
T ss_pred HHHHHHHHHHHHHHHHHHhhchhhhhhhCCCCCcceeeeehhhHHHHHHHHHHHHhhcccCcceEEEecHHHHHHHHHHH
Confidence 44455666777777888889999999999999999999999999999999999999999999999999999999999887
Q ss_pred HHhh-------------------------------------------------h-HHHHHHHHHHHHHhhcccchHhHHH
Q 014481 197 PLLA-------------------------------------------------G-FMPGLVLSRVLVGIGEGVSPSAATD 226 (423)
Q Consensus 197 ~~~~-------------------------------------------------~-~~~~~~~~~~l~G~~~~~~~~~~~~ 226 (423)
+... . .+..++++|+++|+|.+..++...+
T Consensus 116 alphf~~~~y~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~GiG~~~~~~~~~~ 195 (633)
T TIGR00805 116 SLPHFLSGRYSYSTTVSSTGNLSSANSFLCMENLTQALRPTQCPSECQKQHKESLMWLLFLVSQLLRGIGATPIFPLGIS 195 (633)
T ss_pred hChHHhcCCccccccccccccccccccccccCCCCCCccccccccccccccCCCceehhhHHHHHHHhccCCcchhcCch
Confidence 4321 0 2456789999999999999999999
Q ss_pred HHHhcCCCCchhhHHHHHHhhhhhHHHHHHhhHHHhhhcc----------------------CchHHHHHHHHHHHHHHH
Q 014481 227 LIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENL----------------------GWESVFYIFGLLGIAWFS 284 (423)
Q Consensus 227 ~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~----------------------gw~~~~~~~~~~~~~~~~ 284 (423)
++.|++|+++|++++++++.+..+|.++|+++++++.+.+ +|+..|++.+++.++..+
T Consensus 196 ~i~d~~~~~~~~~~~~i~~~~~~iG~~lG~llgg~l~~~~~d~~~~~~~~~~l~~~dprWiGaWwl~Fli~g~l~~l~~v 275 (633)
T TIGR00805 196 YIDDFAKSKNSPLYIGILESIAVFGPAFGYLLGSFCLQIYVDTGSVNTEDVILTPTDPRWIGAWWIGFLICGGVALLTSI 275 (633)
T ss_pred hhhccCCccccHHHHHHHHHHHHhhhHHHHHHHHHHHhcccccccCCCCCCCCCCCCccHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999988642 267778888888777666
Q ss_pred HHHhhccCCcCcCCCCCcc-hhhhhhhhhhhhhHHh--hccccCCCcHHHhhhcHHHHHHHHHHHHHHHHHHHHHhhhhH
Q 014481 285 GFKILQEGETSNGATLAPR-SNYINMKKSLSASLEE--MGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLSWLPT 361 (423)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 361 (423)
.++++|++.+......+.+ .+.....+.......+ .........++.+++||.++...+..++.....+++.+|+|.
T Consensus 276 ~l~~~p~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~n~~f~~~~l~~~~~~~~~~~~~~~lP~ 355 (633)
T TIGR00805 276 PFFFFPKALPKEGKRVNVDVHETEKLEKSEDKSRKKNSDITKDFPKIIKRLLCNPIYMLVILAQVIDSLAFNGYITFLPK 355 (633)
T ss_pred HHHhCccccCCcccccchhhhhhhcccccccccchhhhhhHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6667776544321111000 0000000000000000 000000123568899999999999999999999999999999
Q ss_pred HHHHhhCCChhhHHHHHHHHHH-HHHHHHHHHHHHhHHhhhc
Q 014481 362 YFSEELSLNLTEAAWVSILPPL-ASVLVTSIAAQFADNLIAT 402 (423)
Q Consensus 362 ~~~~~~g~s~~~~~~~~~~~~~-~~~~~~~~~g~l~dr~~~r 402 (423)
|+++++|+++.+++++..+..+ +.+++.+++|+++||++.+
T Consensus 356 yl~~~~g~s~~~ag~l~~~~~i~~~~vG~~l~G~l~~r~~~~ 397 (633)
T TIGR00805 356 YLENQYGISSAEANFLIGVVNLPAAGLGYLIGGFIMKKFKLN 397 (633)
T ss_pred HHHHHcCCcHHHHHHHhhhhhhhHHHHHHhhhhheeeeeccc
Confidence 9999999999999999887776 6688999999999999855
No 37
>PRK15075 citrate-proton symporter; Provisional
Probab=99.96 E-value=9.2e-27 Score=223.64 Aligned_cols=271 Identities=14% Similarity=0.107 Sum_probs=202.0
Q ss_pred hHHHHHHHHHHHHHHHhhhhhhhhhHHHhhhhhCCCcchhhHHH-HHH-----HHHHHhhhhhhhhHhhHhcCchHHHHH
Q 014481 112 RYKLIGTTSLAFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQ-SSF-----FWGYALSQLPGGWLAKIFGGRKVLQTG 185 (423)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~-~~~-----~~~~~~~~~~~g~l~dr~G~r~~~~~~ 185 (423)
|++....++++.++.+++...++...|.+.++++.++.+.+... +.. .++..+++++.|+++||+|||+.++++
T Consensus 13 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~Grr~~l~~~ 92 (434)
T PRK15075 13 KARAILRVTSGNFLEMFDFFLFGFYATAIAKTFFPAGNEFASLMLTFAVFGAGFLMRPLGAIVLGAYIDRVGRRKGLIVT 92 (434)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHhhhHHHHHHHHhhhhchHHHHHHH
Confidence 55678888999999999999999999999999999887765433 322 222346889999999999999999999
Q ss_pred HHHHHHHHHHHHHhhhHHH--------HHHHHHHHHHhhcccchHhHHHHHHhcCCCCchhhHHHHHHhhhhhHHHHHHh
Q 014481 186 VLIWSLATALLPLLAGFMP--------GLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLL 257 (423)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~--------~~~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~ 257 (423)
.++++++.++++ ++++++ .++++|+++|++.+...+....+++|++|+++|++++++...+.++|..+++.
T Consensus 93 ~~~~~~~~~l~~-~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~~rg~~~~~~~~~~~~g~~~g~~ 171 (434)
T PRK15075 93 LSIMASGTLLIA-FVPGYATIGLAAPLLVLLGRLLQGFSAGVELGGVSVYLAEIATPGRKGFYTSWQSASQQVAVVFAAL 171 (434)
T ss_pred HHHHHHHHHHHH-hCCcHHHHHHHHHHHHHHHHHHhhccccccHHHHHHHHHhhCCcccchHHHHHHHHHHHHHHHHHHH
Confidence 999999988875 455544 46889999999999999999999999999999999999999988888888888
Q ss_pred hHHHhh--------hccCchHHHHHHHHHHHHHHHHHHhhccCCcCcCCCCCcchhhhhhhhhhhhhHHhhccccCCCcH
Q 014481 258 LAPPII--------ENLGWESVFYIFGLLGIAWFSGFKILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPW 329 (423)
Q Consensus 258 ~~~~l~--------~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 329 (423)
+++.+. +.+|||++|++.++...+. ++.++..++... .... . . +......+
T Consensus 172 ~g~~l~~~~~~~~~~~~gWr~~f~~~~~~~~~~----~~~~~~~~e~~~----~~~~---~---------~-~~~~~~~~ 230 (434)
T PRK15075 172 LGYLLNQWLSPAQMAEWGWRIPFLIGCLIVPFI----FLIRRSLEETEE----FLAR---K---------H-RPSMREIF 230 (434)
T ss_pred HHHHHHHhCCHHHHhccchHHHHHHHHHHHHHH----HHHHHhcCCCHH----HHHh---h---------h-ccccccHH
Confidence 777663 4679999998754432221 122211111000 0000 0 0 00001113
Q ss_pred HHhhhcHHHHHH-HHHHHHHHHHHHHHHhhhhHHHHHhhCCChhhHHHHHHHHHHHHHHHHHHHHHHhHHhhhcCC
Q 014481 330 KAIFRSKAVWAM-IYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGV 404 (423)
Q Consensus 330 ~~~~~~~~~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~r~~ 404 (423)
+...+++..+.. ++..++.....+....|.|.|+++.+|++..+++++..+..++++++.++.|+++||++||+.
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~ 306 (434)
T PRK15075 231 RSLAANWRIVLAGMLMVAMTTVSFYLITVYTPTFGKTVLHLSAADSLLVTLCVGVSNFIWLPIGGALSDRIGRRPV 306 (434)
T ss_pred HHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHH
Confidence 444555555544 333444556677788999999998889999999988889999999999999999999998854
No 38
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.96 E-value=6.3e-27 Score=219.80 Aligned_cols=271 Identities=15% Similarity=0.086 Sum_probs=219.0
Q ss_pred HHHHHHHHHhhhhhhhhhHHHhhhhhCCCcchhhHHHHHHHHHHHhhhhhhhhHhhHhcCchHHHHHHHHHHHHHHHHHH
Q 014481 119 TSLAFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPL 198 (423)
Q Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~ 198 (423)
+..+.++..+......+.+|.+..+++.+..+++++.+++.++..++++++|+++||+|||++++++.++.+++.++...
T Consensus 4 l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~g~r~~~~~~~~~~~~~~~~~~~ 83 (365)
T TIGR00900 4 LFAAQLISLIGTAITQVALPLYVLAGTGSASVLSLAALAGMLPYVVLSPIAGALADRYDRKKVMIGADLIRAVLVAVLPF 83 (365)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhhHHHHhhchhHHHHHHHHHHHHHHHHHHH
Confidence 44566677777888888889999999999999999999999999999999999999999999999998888887766643
Q ss_pred hh----hHHHHHHHHHHHHHhhcccchHhHHHHHHhcCCCCchhhHHHHHHhhhhhHHHHHHhhHHHhhhccCchHHHHH
Q 014481 199 LA----GFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYI 274 (423)
Q Consensus 199 ~~----~~~~~~~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~~~~ 274 (423)
.. .+++.++++|++.|++.+...+...+++.|++|+++|++++++.+.+..+|.++||.+++.+.+..|||+.|++
T Consensus 84 ~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~g~~~~~~~ 163 (365)
T TIGR00900 84 VALLGGLNIWQVYVLAGILAIAQAFFTPAYQAMLPDLVPEEQLTQANSLSQAVRSLFYIVGPGIGGLMYATLGIKWAIWV 163 (365)
T ss_pred HHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHH
Confidence 33 17789999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred HHHHHHHHHHHHHhhccCCcCcCCCCCcchhhhhhhhhhhhhHHhhccccCCCcHHHhhhcHHHHHHHHHHHHHHHHHHH
Q 014481 275 FGLLGIAWFSGFKILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYT 354 (423)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 354 (423)
.++..++..+..+.++.+++++.++.+.+++. .. +. ...++.++++|.++...+..++.......
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~----~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (365)
T TIGR00900 164 DAVGFAISALLIVSVRIPELAASEIQALSNAV------LR----DT-----REGIKFVLKNPLLRTLLLLALLFNLVFAP 228 (365)
T ss_pred HHHHHHHHHHHHHhcccccCCCccccccchhH------HH----HH-----HhHHHHHHcCcHHHHHHHHHHHHHHHHHH
Confidence 88776665544444433222111110000000 00 00 01256778899998888877777777766
Q ss_pred HH-hhhhHHHHHhhCCChhhHHHHHHHHHHHHHHHHHHHHHHhHHhhhcCC
Q 014481 355 CL-SWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGV 404 (423)
Q Consensus 355 ~~-~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~r~~ 404 (423)
.. .+.|.|.++.+|.+..+.+.+.....++.+++.++.+++.||+++|+.
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 279 (365)
T TIGR00900 229 AIVALFPYVQSKYLGRGSTHYGWVLAAFGLGALLGALLLGLLGRYFKRMAL 279 (365)
T ss_pred HHHHHhHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhchhHH
Confidence 66 788999987789999999999999999999999999999999987743
No 39
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=99.96 E-value=4.5e-27 Score=226.08 Aligned_cols=289 Identities=16% Similarity=0.234 Sum_probs=217.6
Q ss_pred hHHHHHHHHHHHHHHHhhhhhhhhhHHHhhhhhCCCcchhhHHHHHHHHHHHhhhhhhhhHhhHhcCchHHHHHHHHHHH
Q 014481 112 RYKLIGTTSLAFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSL 191 (423)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~ 191 (423)
++..+..+.+.+...+.....+....|.+.+ +|++..+.+++.+++.++..+++++.|+++||+|||+.++++.++.++
T Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~~~~~~~~~~~~~~ 103 (438)
T TIGR00712 25 RWQVFLGIFFGYAAYYLVRKNFALAMPYLVE-QGFSKGELGFALSAISIAYGFSKFIMGSVSDRSNPRVFLPAGLILSAA 103 (438)
T ss_pred HHHHHHHHHHHHHHHHHHhccHHhhhHHHHH-cCCCHhHhHHHHHHHHHHHHHhhhccchhhhccCCceehHHHHHHHHH
Confidence 3555666666777777777777777887775 599999999999999999999999999999999999999999888888
Q ss_pred HHHHHHHh---hhHHHHHHHHHHHHHhhcccchHhHHHHHHhcCCCCchhhHHHHHHhhhhhHHHHHHhhHHHhhh-ccC
Q 014481 192 ATALLPLL---AGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIE-NLG 267 (423)
Q Consensus 192 ~~~~~~~~---~~~~~~~~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~-~~g 267 (423)
+.++.... .++++.+++.|++.|++.+..++.....+.+++|+++|++++++++.+..+|..+++.+.+.+.+ ..+
T Consensus 104 ~~~~~~~~~~~~~~~~~l~~~~~l~g~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~ 183 (438)
T TIGR00712 104 VMLLMGFVPWATSSIAIMFVLLFLNGWFQGMGWPPCGRTMVHWWSQSERGTIVSIWNCAHNIGGGIPPLLVLLGMAWFND 183 (438)
T ss_pred HHHHHhccccccchHHHHHHHHHHHHHHhhcchHHHHHHHHHhcCcccchhHHHHHHHHHHhHhHHHHHHHHHHHHHhhh
Confidence 87665332 24567788899999999999999899999999999999999999999999999999988776544 468
Q ss_pred chHHHHHHHHHHHHHH-HHHHhhccCCcCcCCCCCcchhhhhhhhhhhhhHHhhccccCCCcHHHhhhcHHHHHHHHHHH
Q 014481 268 WESVFYIFGLLGIAWF-SGFKILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHF 346 (423)
Q Consensus 268 w~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 346 (423)
||+.|++.+++.++.. +..++++|+++....++.++.+. +..+.... ..+.+.+.++...+.+++++.+|...+..+
T Consensus 184 w~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (438)
T TIGR00712 184 WHAALYFPAICAIIVALFAFAMMRDTPQSCGLPPIEEYRN-DYPDDYNE-KAEQELTAKEIFMQYVLPNKLLWYIAIANV 261 (438)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhccCCHHhcCCCCchhccc-cccccccc-ccccccchHHHHHHHHccCchHHHHHHHHH
Confidence 9999999888877654 44445555433211110000000 00000000 000000000111234688999999888888
Q ss_pred HHHHHHHHHHhhhhHHHHHhhCCChhhHHHHHHHHHHHHHHHHHHHHHHhHHhhhcC
Q 014481 347 CGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATG 403 (423)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~r~ 403 (423)
+.....++..+++|.|+++..|+++.++++...+..++++++.+++|++.||+++++
T Consensus 262 ~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~ 318 (438)
T TIGR00712 262 FVYLLRYGVLDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFKGN 318 (438)
T ss_pred HHHHHHHHHHHhHHHHHHHccCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhccCc
Confidence 877788888899999999888999999999999999999999999999999997553
No 40
>PRK10133 L-fucose transporter; Provisional
Probab=99.96 E-value=3.2e-26 Score=219.16 Aligned_cols=274 Identities=15% Similarity=0.167 Sum_probs=212.9
Q ss_pred HHHHHHHHHHHHHHHhhhhhhhhhHHHhhhhhCCCcchhhHHHHHHHHHHHhhhhhhhhHhhHhcCchHHHHHHHHHHHH
Q 014481 113 YKLIGTTSLAFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLA 192 (423)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~ 192 (423)
...+..+.+.+++..+.........|.+++++|+++.+.|+..+.+.+++.+++++.|+++||+|||+++.++.++++++
T Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~~p~i~~~~~~s~~~~gl~~~~~~~g~~i~~~~~g~l~dr~G~r~~l~~g~~~~~~~ 104 (438)
T PRK10133 25 IIPFALLCSLFFLWAVANNLNDILLPQFQQAFTLTNFQAGLIQSAFYFGYFIIPIPAGILMKKLSYKAGIITGLFLYALG 104 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHH
Confidence 34556677777888888889999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHH--HhhhHHHHHHHHHHHHHhhcccchHhHHHHHHhcCCCCchhhHHHHHHhhhhhHHHHHHhhHHHhhh------
Q 014481 193 TALLP--LLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIE------ 264 (423)
Q Consensus 193 ~~~~~--~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~------ 264 (423)
.+++. ..+++++.++++|+++|+|.+...+..+.++.++.++++|+..+++.+..+.+|..+|+.+++.+..
T Consensus 105 ~~l~~~~~~a~~~~~ll~~r~l~G~g~g~~~~~~~~~v~~~~~~~~~~~~~s~~~~~~~~G~~~g~~~g~~l~~~~~~~~ 184 (438)
T PRK10133 105 AALFWPAAEIMNYTLFLVGLFIIAAGLGCLETAANPFVTVLGPESSGHFRLNLAQTFNSFGAIIAVVFGQSLILSNVPHQ 184 (438)
T ss_pred HHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccc
Confidence 87652 3567889999999999999999999999999998777777778999999999999999999876541
Q ss_pred ------------c--------cCchHHHHHHHHHHHHHHHHHHhhccCCcCcCCCCCcchhhhhhhhhhhhhHHhhcccc
Q 014481 265 ------------N--------LGWESVFYIFGLLGIAWFSGFKILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESL 324 (423)
Q Consensus 265 ------------~--------~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (423)
. .+||++|+....+..+.+++..+.+.++.+.++ ..+ ++. ..
T Consensus 185 ~~~~~~~l~~~~~~~w~~~~~~~w~~~f~~~~~v~~~~~~~~~~~~~p~~~~~~-~~~-~~~----------------~~ 246 (438)
T PRK10133 185 SQDVLDKMTPEQLSAYKHSLVLSVQTPYMIIVAIVLLVALLIMLTKFPALQSDN-HSD-AKQ----------------GS 246 (438)
T ss_pred chhhhhccChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccc-ccc-ccc----------------cc
Confidence 0 246666654443332222222222111111000 000 000 00
Q ss_pred CCCcHHHhhhcHHHHHHHHHHHHHHHHHHHHHhhhhHHH-HHhhCCChhhHHHHHHHHHHHHHHHHHHHHHHhHHhhhcC
Q 014481 325 KDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLSWLPTYF-SEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATG 403 (423)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~-~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~r~ 403 (423)
....+++++++|.++...+..++....+.....|++.|+ ++.+|+++.++++......++.++|+++++++.||+++|+
T Consensus 247 ~~~~~~~ll~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~g~s~~~ag~~~~~~~~~~~vG~~~~g~l~~r~g~~~ 326 (438)
T PRK10133 247 FSASLSRLARIRHWRWAVLAQFCYVGAQTACWSYLIRYAVEEIPGMTAGFAANYLTGTMVCFFIGRFTGTWLISRFAPHK 326 (438)
T ss_pred hhhhHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHH
Confidence 011246788999988887777888888888888999885 5568999999999999999999999999999999999885
Q ss_pred C
Q 014481 404 V 404 (423)
Q Consensus 404 ~ 404 (423)
.
T Consensus 327 ~ 327 (438)
T PRK10133 327 V 327 (438)
T ss_pred H
Confidence 4
No 41
>PRK10504 putative transporter; Provisional
Probab=99.96 E-value=3.4e-26 Score=222.39 Aligned_cols=288 Identities=21% Similarity=0.268 Sum_probs=226.3
Q ss_pred HHHHHHHHHHHHHHhhhhhhhhhHHHhhhhhCCCcchhhHHHHHHHHHHHhhhhhhhhHhhHhcCchHHHHHHHHHHHHH
Q 014481 114 KLIGTTSLAFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLAT 193 (423)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~ 193 (423)
+.++.++++.++..++.....+.+|.+.+++|.+..+.+++.+.+.++..++.+++|+++||+|||++++.+.++.+++.
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~ 89 (471)
T PRK10504 10 WQLWIVAFGFFMQSLDTTIVNTALPSMAQSLGESPLHMHMVIVSYVLTVAVMLPASGWLADRVGVRNIFFTAIVLFTLGS 89 (471)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHH
Confidence 34556777788888888889999999999999999999999999999999999999999999999999999988888887
Q ss_pred HHHHHhhhHHHHHHHHHHHHHhhcccchHhHHHHHHhcCCCCchhhHHHHHHhhhhhHHHHHHhhHHHhhhccCchHHHH
Q 014481 194 ALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFY 273 (423)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~~~ 273 (423)
+++ ...++++.+++.|+++|++.+...+...+++.+++|+++|++++++.....++|..+||.+++.+.+..|||+.|+
T Consensus 90 ~~~-~~~~~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~g~l~~~~gw~~~f~ 168 (471)
T PRK10504 90 LFC-ALSGTLNELLLARVLQGVGGAMMVPVGRLTVMKIVPREQYMAAMTFVTLPGQVGPLLGPALGGLLVEYASWHWIFL 168 (471)
T ss_pred HHH-HHhCCHHHHHHHHHHHHhhhHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhccHHHHHH
Confidence 766 4567778899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhccCCcCcCCCCCcchhhh-------------hhhhh--hh-----------------hhHHhhc
Q 014481 274 IFGLLGIAWFSGFKILQEGETSNGATLAPRSNYI-------------NMKKS--LS-----------------ASLEEMG 321 (423)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~--~~-----------------~~~~~~~ 321 (423)
+.....++..+......++.+.... +.+..... ...+. .. ...++..
T Consensus 169 ~~~~~~~l~~~~~~~~~~~~~~~~~-r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (471)
T PRK10504 169 INIPVGIIGAIATLMLMPNYTMQTR-RFDLSGFLLLAVGMATLTLALDGSKGLGLSPLAIAGLVAVGVVALLLYLLHARN 247 (471)
T ss_pred HHHHHHHHHHHHHHHhCCCccccCC-CCChHHHHHHHHHHHHHHHHHhcCCcCCcchHHHHHHHHHHHHHHHHHHHHHhc
Confidence 9887766554444433222211111 11100000 00000 00 0001111
Q ss_pred cccCCCcHHHhhhcHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHhhCCChhhHHHHHHHHHHHHHHHHHHHHHHhHHhhh
Q 014481 322 ESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIA 401 (423)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~ 401 (423)
...+..+. ++++||.++...+..++..........+.|.|++..+|.++.+++++.....++.+++.++.+++.||+++
T Consensus 248 ~~~~~~~~-~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~r~g~ 326 (471)
T PRK10504 248 NNRALFSL-KLFRTRTFSLGLAGSFAGRIGSGMLPFMTPVFLQIGLGFSPFHAGLMMIPMVLGSMGMKRIVVQVVNRFGY 326 (471)
T ss_pred CCCCccCH-HHhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCc
Confidence 11122233 57899999988888888888877777889999987789999999999999999999999999999999998
Q ss_pred cCC
Q 014481 402 TGV 404 (423)
Q Consensus 402 r~~ 404 (423)
|+.
T Consensus 327 ~~~ 329 (471)
T PRK10504 327 RRV 329 (471)
T ss_pred hHH
Confidence 754
No 42
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=99.96 E-value=3.3e-26 Score=217.23 Aligned_cols=266 Identities=17% Similarity=0.169 Sum_probs=215.2
Q ss_pred HHHHHHHHHHHHhhhhhhhhhHHHhhhhhCCCcchhhHHHHHHHHHHHhhhhhhhhHhhHhcCchHHHHHHHHHHHHHHH
Q 014481 116 IGTTSLAFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATAL 195 (423)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~ 195 (423)
+.+..+..+....+.....+.+|.+.+++|.+..+.++..+.+.++..+++++.|+++||+|||+.++++.++.+++.++
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~~i~~~~ 84 (392)
T PRK10473 5 LLCSFALVLLYPAGIDMYLVGLPRIAADLNASEAQLHIAFSVYLAGMAAAMLFAGKIADRSGRKPVAIPGAALFIIASLL 84 (392)
T ss_pred HHHHHHHHHHHHHHHHHHhhhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhHhHHHHHhCChHHHHHHHHHHHHHHHH
Confidence 34455555566666677778899999999999999999999999999999999999999999999999999998888877
Q ss_pred HHHhhhHHHHHHHHHHHHHhhcccchHhHHHHHHhcCCCCchhhHHHHHHhhhhhHHHHHHhhHHHhhhccCchHHHHHH
Q 014481 196 LPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIF 275 (423)
Q Consensus 196 ~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~~~~~ 275 (423)
+ ...++++.+++.|++.|++.+...+...+++.|++|+++|++++++.+....+|..++|.+++.+.+..||++.|++.
T Consensus 85 ~-~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~i~~~~~~~i~~~l~~~~g~~~~~~~~ 163 (392)
T PRK10473 85 C-SLAETSSLFLAGRFLQGIGAGCCYVVAFAILRDTLDDRRRAKVLSLLNGITCIIPVLAPVLGHLIMLKFPWQSLFYTM 163 (392)
T ss_pred H-HHhCcHHHHHHHHHHHHhhhhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcChHHHHHHH
Confidence 6 456777888999999999999989999999999999999999999999999999999999999988888999999998
Q ss_pred HHHHHHHHHH-HHhhccCCcCcCCCCCcchhhhhhhhhhhhhHHhhccccCCCcHHHhhhcHHHHHHHHHHHHHHHHHHH
Q 014481 276 GLLGIAWFSG-FKILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYT 354 (423)
Q Consensus 276 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 354 (423)
+++.++..+. .+.++|+++.+.. ++.. . ....++.++++.++...+...+.......
T Consensus 164 ~~~~~i~~~~~~~~~~~~~~~~~~--~~~~----~----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (392)
T PRK10473 164 AAMGILVLLLSLFILKETRPARAP--AASS----K----------------PRENSESLLNRFFLSRLVITTLSVTVILT 221 (392)
T ss_pred HHHHHHHHHHHHHHcCCCCCcccC--Cccc----h----------------HHHHHHHHhCHHHHHHHHHHHHHHHHHHH
Confidence 8887665444 3444544322110 0000 0 00124667888877666655555555556
Q ss_pred HHhhhhHHHHHhhCCChhhHHHHHHHHHHHHHHHHHHHHHHhHHhhhcCC
Q 014481 355 CLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGV 404 (423)
Q Consensus 355 ~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~r~~ 404 (423)
+..+.|.++++.+|+++.+.+.+....+++.+++.++.+++.||+++|+.
T Consensus 222 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~l~~r~g~~~~ 271 (392)
T PRK10473 222 FVNTSPVLLMEQMGFSRGEYAIIMALTAGVSMTVSFSTPFALGIFKPRTL 271 (392)
T ss_pred HHHhCHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHH
Confidence 66777888888889999999999999999999999999999999998854
No 43
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=99.95 E-value=2.3e-26 Score=217.17 Aligned_cols=257 Identities=20% Similarity=0.279 Sum_probs=214.0
Q ss_pred hhhhhhhhhHHHhhhhhCCCcchhhHHHHHHHHHHHhhhhhhhhHhhHhcCchHHHHHHHHHHHHHHHHHHhhhHHHHHH
Q 014481 128 MDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPLLAGFMPGLV 207 (423)
Q Consensus 128 ~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (423)
+...++.+.+|.+.+++|+++.+.+++.+++.++..++.+++|+++||+|||+++..+.++.+++.+++ ...++++.++
T Consensus 5 ~~~~~~~p~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~i~~~~~-~~~~~~~~~~ 83 (377)
T PRK11102 5 LAIDMYLPALPVIAADFGVSAGSVQMTLSAYILGFAIGQLFYGPMADSFGRKPVILGGTLVFALAAVAC-ALAQTIDQLI 83 (377)
T ss_pred hHHHHHhccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhchHHhhcCChHHHHHHHHHHHHHHHHH-HHHccHHHHH
Confidence 345667788999999999999999999999999999999999999999999999999999988888777 4567778899
Q ss_pred HHHHHHHhhcccchHhHHHHHHhcCCCCchhhHHHHHHhhhhhHHHHHHhhHHHhhhccCchHHHHHHHHHHHHHHHH-H
Q 014481 208 LSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAWFSG-F 286 (423)
Q Consensus 208 ~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~~~~~~~~~~~~~~~-~ 286 (423)
++|++.|++.+...+...+++.+++|+++|++++++.+....+|..++|.+++.+.+..|||+.|++.+++.++..+. .
T Consensus 84 ~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (377)
T PRK11102 84 YMRFLHGLAAAAASVVINALMRDMFPKEEFSRMMSFVTLVMTIAPLLAPIIGGWLLVWFSWHAIFWVLALAAILAAALVF 163 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999899999999988887665444 3
Q ss_pred HhhccCCcCcCCCCCcchhhhhhhhhhhhhHHhhccccCCCcHHHhhhcHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHh
Q 014481 287 KILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEE 366 (423)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 366 (423)
++++|++++++++. .+ . ++. ..++++.++++.++...+..++...+.+....+.|.++.+.
T Consensus 164 ~~~~~~~~~~~~~~-~~--~---~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (377)
T PRK11102 164 FFIPETLPKERRQP-FH--L---RTT-------------IRNFASLFRHKRVLGYMLASGFSFAGMFSFLTAGPFVYIEL 224 (377)
T ss_pred HhCCccCcccccCC-CC--h---HHH-------------HHHHHHHHcChHHHHHHHHHHHHHHHHHHHHHcCHHHHHHH
Confidence 44555432211100 00 0 000 01245778889888877777777777777778888888888
Q ss_pred hCCChhhHHHHHHHHHHHHHHHHHHHHHHhHHhhhcCC
Q 014481 367 LSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGV 404 (423)
Q Consensus 367 ~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~r~~ 404 (423)
+|+++.+.+.+..+..++.+++.++.+++.||+++|+.
T Consensus 225 ~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~g~~~~ 262 (377)
T PRK11102 225 NGVSPQNFGYYFALNIVFLFVMTIINSRFVRRVGALNM 262 (377)
T ss_pred hCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHH
Confidence 89999999999999999999999999999999998854
No 44
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.95 E-value=3.8e-26 Score=217.24 Aligned_cols=273 Identities=15% Similarity=0.130 Sum_probs=209.0
Q ss_pred HHHHHHHHHHHHHHhhhhhhhhhHHHhhhhhCCCcchhhHHHHHHHHHHHhhhhhhhhHhhHhcCchHHHHHHHHHHHHH
Q 014481 114 KLIGTTSLAFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLAT 193 (423)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~ 193 (423)
+.+....++.++.........+.++.+.+++|.++.+.|++.+.+.++..++.++.|++.||+|||+++..+.++.+++.
T Consensus 13 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~dr~g~k~~l~~~~~~~~~~~ 92 (402)
T TIGR00897 13 LNLLWGYIGVVVFMTGDGLEQGWLSPFLKALGLSPQQSASAFTLYGIAAAISAWISGVVAEIIGPLKTMMIGLLLWCVGH 92 (402)
T ss_pred chhhHHHHHHHHHHHhhhhHHHhHHHHHHHhCCCHHHhHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHH
Confidence 34445555555555555555566777778999999999999999999999999999999999999999999999888876
Q ss_pred HHHHH--h-hhHHHHHHHHHHHHHhhcccchHhHHHHHHhcCCCCchhhHHHHHHhhhhhHH-HHHHhhHHHhhhccCch
Q 014481 194 ALLPL--L-AGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGS-VAGLLLAPPIIENLGWE 269 (423)
Q Consensus 194 ~~~~~--~-~~~~~~~~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~-~~g~~~~~~l~~~~gw~ 269 (423)
+++.. . .++++.+++.|++.|++.+...+...+.+.+++|+++|++++|+.+.+.++|. ++||++++.+.+..||+
T Consensus 93 ~~~~~~~~~~~~~~~l~~~~~i~G~g~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~g~~~~~~l~~~~g~~ 172 (402)
T TIGR00897 93 AAFIVFGLGHANYPLILLFYGIRGLGYPLFAYSFLVWVVYNTKQDNLSSAVGWFWAVYSIGIGVFGSYYSSYAIPAFGEM 172 (402)
T ss_pred HHHHHHhccCccHHHHHHHHHHHHcchHHHHhHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccchH
Confidence 54421 2 34677888999999999888778888889999999999999999999999996 68999999999888987
Q ss_pred HHHHHHHHHHHHHHHHHHhhccCCcCcCCCCCcchhhhhhhhhhhhhHHhhccccCCCcHHHhhhcHHHHHHHHHHHHHH
Q 014481 270 SVFYIFGLLGIAWFSGFKILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGS 349 (423)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 349 (423)
..+|......++..+..+++.+++++++.+ +++++. .+ . ...++.++++|.++...+..++..
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-------~~-~--------~~~~~~~~~~~~~~~~~~~~~~~~ 235 (402)
T TIGR00897 173 NTLWSALAFVLTGGVIALFSNKDIFTPQHM-QTREKF-------SE-L--------GKAATILFTNPNVLLGGMVRIINT 235 (402)
T ss_pred HHHHHHHHHHHHHHHHHHhccCCCCCcccc-cCCcch-------hh-H--------HHHHHHHHcChhHHHHHHHHHHHH
Confidence 776655444333333333332222111110 000000 00 0 012467889999998888888888
Q ss_pred HHHHHHHhhhhHHHHHhhCCChhhHHHHHHHHHHHHHHHHHHHHHHhHHhhhcCC
Q 014481 350 WGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGV 404 (423)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~r~~ 404 (423)
...++..++.|.|+++ +|++..+.+.+.....++.+++.++.|++.||+++|+.
T Consensus 236 ~~~~~~~~~~p~~~~~-~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~ 289 (402)
T TIGR00897 236 IGLFGFAVFLPMFVAE-LGFSTSEWLQIWGTFFFTNIVFNVIFGIVGDKLGWMNT 289 (402)
T ss_pred HHHHHHHHHHHHHHHH-cCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhH
Confidence 8888889999999975 79999999998899999999999999999999997754
No 45
>PRK09952 shikimate transporter; Provisional
Probab=99.95 E-value=8.8e-26 Score=216.82 Aligned_cols=274 Identities=19% Similarity=0.165 Sum_probs=202.2
Q ss_pred hhHHHHHHHHHHHHHHHhhhhhhhhhHHH-hhhhh--CCCcchhhHHH-----HHHHHHHHhhhhhhhhHhhHhcCchHH
Q 014481 111 QRYKLIGTTSLAFVICNMDKVNLSVAIIP-MSHRF--GWNSSVAGLVQ-----SSFFWGYALSQLPGGWLAKIFGGRKVL 182 (423)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~--~~s~~~~~~~~-----~~~~~~~~~~~~~~g~l~dr~G~r~~~ 182 (423)
++++.+....++.++.+++...++...+. +.+++ +.++. .+++. ++..++..+++++.|+++||+|||+++
T Consensus 19 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~~G~l~Dr~Grr~~l 97 (438)
T PRK09952 19 RARRAALGSFAGAVVDWYDFLLYGITAALVFNREFFPQVSPA-MGTLAAFATFGVGFLFRPLGGVVFGHFGDRLGRKRML 97 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcH-HHHHHHHHHHHHHHHHHhhHHHHHHHHHHhhccHHHH
Confidence 35567778888999999999998888775 45555 66665 45553 345566778999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhhHHH--------HHHHHHHHHHhhcccchHhHHHHHHhcCCCCchhhHHHHHHhhhhhHHHH
Q 014481 183 QTGVLIWSLATALLPLLAGFMP--------GLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVA 254 (423)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~ 254 (423)
+++.++++++.++++ +.++++ .++++|+++|++.+..++....++.|++|+++|++..+....+..+|.++
T Consensus 98 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~~rg~~~~~~~~g~~~G~~l 176 (438)
T PRK09952 98 MLTVWMMGIATALIG-LLPSFSTIGWWAPVLLVTLRAIQGFAVGGEWGGAALLAVESAPKNKKAFYSSGVQVGYGVGLLL 176 (438)
T ss_pred HHHHHHHHHHHHHHh-cCCcHHHHHHHHHHHHHHHHHHHHhhhcccHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHH
Confidence 999999999988874 555544 58889999999999999999999999999999999999999999999999
Q ss_pred HHhhHHHhhh--------ccCchHHHHHHHHHHHHHHHHHHhhccCCcCcCCCCCcchhhhhhhhhhhhhHHhhccccCC
Q 014481 255 GLLLAPPIIE--------NLGWESVFYIFGLLGIAWFSGFKILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKD 326 (423)
Q Consensus 255 g~~~~~~l~~--------~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (423)
+..+...+.. .+|||+.|++.+++.++........+|+++......+. ++..+.
T Consensus 177 ~~~~~~~l~~~~~~~~~~~~gWr~~f~~~~~~~l~~~~l~~~~~es~~~~~~~~~~------------------~~~~~~ 238 (438)
T PRK09952 177 STGLVSLISMMTTDEQFLSWGWRIPFLFSIVLVLIALWVRNGMEESAEFEQQQHEQ------------------AAAKKR 238 (438)
T ss_pred HHHHHHHHHHhCCHHHhhccChHHHHHHHHHHHHHHHHHHHhCCCChhHHHHHhhc------------------cccccc
Confidence 8877766542 47999999988776544333222233332110000000 000001
Q ss_pred Cc-HHHhhhcHHHHHHHH-HHHHHHHHHHHHHhhhhHHHHHhhCCChhhHHHHHHHHHHHHHHHHHHHHHHhHHhhhcCC
Q 014481 327 VP-WKAIFRSKAVWAMIY-AHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGV 404 (423)
Q Consensus 327 ~~-~~~~~~~~~~~~~~l-~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~r~~ 404 (423)
.+ .+.++++|+.+...+ ..++..+..+....|.|.|+++.+|++......+....++..+++.++.|+++||++||+.
T Consensus 239 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~g~s~~~~~~~~~~~g~~~~i~~~~~g~l~Dr~grr~~ 318 (438)
T PRK09952 239 IPVIEALLRHPGAFLKIIALRLCELLTMYIVTAFALNYSTQNLGLPRELFLNIGLLVGGLSCLTIPCFAWLADRFGRRRV 318 (438)
T ss_pred CCHHHHHHHchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHH
Confidence 11 234667777766544 4555566777888899999988889988766666666778888899999999999998854
No 46
>PRK11043 putative transporter; Provisional
Probab=99.95 E-value=9.1e-26 Score=214.86 Aligned_cols=262 Identities=14% Similarity=0.175 Sum_probs=214.2
Q ss_pred HHHHHHHHHHHhhhhhhhhhHHHhhhhhCCCcchhhHHHHHHHHHHHhhhhhhhhHhhHhcCchHHHHHHHHHHHHHHHH
Q 014481 117 GTTSLAFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALL 196 (423)
Q Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~ 196 (423)
..+.+...+..+....+.+.+|.+.+++|.++.+.+++.+++.++..++++++|+++||+|||+.+..+.++.+++.++.
T Consensus 9 ~~~~~~~~~~~~~~~~~~p~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~ 88 (401)
T PRK11043 9 VYLAGLSMLGFLATDMYLPAFKAIQADLQTSASAVSASLSLFLAGFALGQLLWGPLSDRYGRKPVLLAGLSLFALGSLGM 88 (401)
T ss_pred HHHHHHHHHHHHHHHHHHhhHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHhhhhHHhhcCCcHHHHHHHHHHHHHHHHH
Confidence 33333445555667788888899999999999999999999999999999999999999999999999998888887766
Q ss_pred HHhhhHHHHHHHHHHHHHhhcccchHhHHHHHHhcCCCCchhhHHHHHHhhhhhHHHHHHhhHHHhhhccCchHHHHHHH
Q 014481 197 PLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFG 276 (423)
Q Consensus 197 ~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~~~~~~ 276 (423)
...++++.+++.|++.|++.+...+...+++.|+++++++++..+.......+|..++|.+++.+.+..|||+.|++.+
T Consensus 89 -~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g~~~~~~~~~ 167 (401)
T PRK11043 89 -LWVESAAQLLVLRFVQAVGVCSAAVIWQALVIDRYPAQKANRVFATIMPLVALSPALAPLLGAWLLNHFGWQAIFATLF 167 (401)
T ss_pred -HHhcCHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHH
Confidence 4567788999999999999888888888999999998889999999999999999999999999999999999999988
Q ss_pred HHHHHHHHHHHhhccCCcCcCCCCCcchhhhhhhhhhhhhHHhhccccCCCcHHHhhhcHHHHHHHHHHHHHHHHHHHHH
Q 014481 277 LLGIAWFSGFKILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCL 356 (423)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 356 (423)
++.++..+..+++++++++++. ++ +..++++++++|.++...+...+.........
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~----~~--------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (401)
T PRK11043 168 AITLLLILPTLRLKPSKKARKQ----SQ--------------------DALTFKQLLKSKTYLGNVLIFAACSAAFFAWL 223 (401)
T ss_pred HHHHHHHHHHHHcCCCCCcccc----ch--------------------HHHHHHHHHcChhHHHHHHHHHHHHHHHHHHH
Confidence 8877766555555544321110 00 00125678888888776666666666667777
Q ss_pred hhhhHHHHHhhCCChhhHHHHHHHHHHHHHHHHHHHHHHhHHhhhcCC
Q 014481 357 SWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGV 404 (423)
Q Consensus 357 ~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~r~~ 404 (423)
.+.|.++++ +|++..+.++......++.+++.++.+++.||+++|+.
T Consensus 224 ~~~p~~~~~-~g~s~~~~g~~~~~~~~~~~~g~~~~~~l~~r~~~~~~ 270 (401)
T PRK11043 224 TGSPFILEQ-MGYSPADIGLSYVPQTIAFLVGGYGCRAALQKWGGEQL 270 (401)
T ss_pred HHhHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHH
Confidence 888998875 79999999998888888999999999999999987753
No 47
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=99.95 E-value=1.3e-25 Score=213.36 Aligned_cols=266 Identities=18% Similarity=0.219 Sum_probs=216.5
Q ss_pred hHHHHHHHHHHHHHHHhhhhhhhhhHHHhhhhhCCCcchhhHHHHHHHHHHHhhhhhhhhHhhHhcCchHHHHHHHHHHH
Q 014481 112 RYKLIGTTSLAFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSL 191 (423)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~ 191 (423)
.++.+....+...+..+......+.+|.+.+++|.++.+.+++.+++.++..++++++|+++||+|||++++++.++.++
T Consensus 6 ~~~~l~~~~~~~~~~~~~~~~~~p~~~~i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~grr~~~~~~~~~~~~ 85 (394)
T PRK11652 6 NVNLLFMLVLLVAVGQMAQTIYVPAIADMARDLNVREGAVQAVMAAYLLTYGLSQLFYGPLSDRVGRRPVILVGMSIFIL 85 (394)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHH
Confidence 45556666666666667778888889999999999999999999999999999999999999999999999999998888
Q ss_pred HHHHHHHhhhHHHHHHHHHHHHHhhcccchHhHHHHHHhcCCCCchhhHHHHHHhhhhhHHHHHHhhHHHhhhccCchHH
Q 014481 192 ATALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESV 271 (423)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~ 271 (423)
+.++. ...++++.+++.|++.|++.+...+....+..|.+++++++++.++...+..+|..+||.+++.+.+..|||+.
T Consensus 86 ~~~~~-~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g~~~~ 164 (394)
T PRK11652 86 GTLVA-LFAHSLTVLIAASAIQGLGTGVGGVMARTLPRDLYEGTQLRHANSLLNMGILVSPLLAPLIGGLLTTLFGWRAC 164 (394)
T ss_pred HHHHH-HHHccHHHHHHHHHHHHhhhhHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccChHHH
Confidence 88776 45677889999999999998888888888999999989999999999999999999999999999998899999
Q ss_pred HHHHHHHHHHHHH-HHHhhccCCcCcCCCCCcchhhhhhhhhhhhhHHhhccccCCCcHHHhhhcHHHHHHHHHHHHHHH
Q 014481 272 FYIFGLLGIAWFS-GFKILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSW 350 (423)
Q Consensus 272 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 350 (423)
|++.++..++..+ ..++.+|+++.+.. +.+ . ...+++++++|.++...+..+....
T Consensus 165 f~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~---~----------------~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (394)
T PRK11652 165 YLFLLLLGAGVTFSMARWMPETRPADAR----RTR---V----------------LASYRTLLSNRRFNCYLLMLIGTLA 221 (394)
T ss_pred HHHHHHHHHHHHHHHHHhCCccCccccc----hhH---H----------------HHHHHHHHcChHHHHHHHHHHHHHH
Confidence 9998877665543 33445554322110 000 0 0124677888888877666666666
Q ss_pred HHHHHHhhhhHHHHHhhCCChhhHHHHHHHHHHHHHHHHHHHHHHhHHhhh
Q 014481 351 GHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIA 401 (423)
Q Consensus 351 ~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~ 401 (423)
....+..+.+.++++.+|+++.+.+++.....++.+++..+.+++.||+++
T Consensus 222 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~ 272 (394)
T PRK11652 222 GIAVFEACSGVLMGAVLGLSSMTVSILFILPIPAAFFGAWFAGRPNKRFST 272 (394)
T ss_pred HHHHHHHhChHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 666667778888988889999999998888888888999999999999873
No 48
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.95 E-value=5e-26 Score=219.36 Aligned_cols=284 Identities=14% Similarity=0.151 Sum_probs=213.8
Q ss_pred hHHHHHHHHHHHHHHHhhhhhhhhhHHHhhhhhCCCcchhhHHHHHHHHHHHhhhhhhhhHhhHhcCchHHHHHHHHHHH
Q 014481 112 RYKLIGTTSLAFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSL 191 (423)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~ 191 (423)
+|.++...++...........++..++.+.+++|.+..+.+++.+.+.++..++.++.|+++||+|||++++.+.++.++
T Consensus 17 ~w~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~~~~ 96 (455)
T TIGR00892 17 GWVVLGATFVSIGFSYAFPKAVTVFFKELQQIFQATYSETAWISSIMLAVLYAGGPISSILVNRFGCRPVVIAGGLLASL 96 (455)
T ss_pred chHHHHHHHHHHHHHHhhhcchhhhHHHHHHHhCcchhHHHHHHHHHHHHHHHhhHHHHHHHHHcCchHHHHhhHHHHHH
Confidence 46666666666665555666678889999999999999999999999999999999999999999999999999988888
Q ss_pred HHHHHHHhhhHHHHHHH-HHHHHHhhcccchHhHHHHHHhcCCCCchhhHHHHHHhhhhhHHHHHHhhHHHhhhccCchH
Q 014481 192 ATALLPLLAGFMPGLVL-SRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWES 270 (423)
Q Consensus 192 ~~~~~~~~~~~~~~~~~-~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~ 270 (423)
+.+++ ..+++++.+++ .|++.|++.+...+...+++.++++ ++|+++.|+.+.+..+|..++|++++.+.+.+|||+
T Consensus 97 ~~~~~-~~~~~~~~l~~~~~~l~G~~~~~~~~~~~~~~~~~~~-~~r~~a~g~~~~~~~~g~~~~~~l~~~l~~~~gwr~ 174 (455)
T TIGR00892 97 GMILA-SFSSNVIELYLTAGFITGLGLAFNFQPSLTMLGKYFY-RRRPLANGLAMAGSPVFLSTLAPLNQYLFESFGWRG 174 (455)
T ss_pred HHHHH-HHhhhHHHHHHHHHHHHHhcchhhhhHHHHHHHHHHH-hhHHHHHHHHHhcccHHHHHHHHHHHHHHHHhChHH
Confidence 88776 45566666654 5789999998777777888899996 799999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhccCCcCcCC-CCCcchhhhhhhhhhhhhH-HhhccccCCCcHHHhhhcHHHHHHHHHHHHH
Q 014481 271 VFYIFGLLGIAWFSGFKILQEGETSNGA-TLAPRSNYINMKKSLSASL-EEMGESLKDVPWKAIFRSKAVWAMIYAHFCG 348 (423)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 348 (423)
+|++.+++.++..+..+++.+.++.... ..+.++............. ....+..+..+ .+++++|.++...+..++.
T Consensus 175 ~f~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~ 253 (455)
T TIGR00892 175 SFLILGGLLLHCCVCGALMRPVGPSQRVSKSKSKEGLPPDGSTKKLSKKSTAEKINRFLD-FSLFTHRGFLVYLSGNVIM 253 (455)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCcccccccccccccCCCCCccccccccchhhhhhhhcc-hHHhcCchHHHHHHHHHHH
Confidence 9999998877665544444332211000 0000000000000000000 00000001111 2578899999888888888
Q ss_pred HHHHHHHHhhhhHHHHHhhCCChhhHHHHHHHHHHHHHHHHHHHHHHhHHh
Q 014481 349 SWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNL 399 (423)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~ 399 (423)
..+.+....++|.|+++ .|++..+++.+.++.+++.++++++.|++.||.
T Consensus 254 ~~~~~~~~~~l~~~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~ 303 (455)
T TIGR00892 254 FLGFFAPIIFLVPYAKD-KGVDEYEAAFLLSIIGFVDIFARPSCGLIAGLK 303 (455)
T ss_pred HHHccchHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 88888888899999976 699999999999999999999999999999974
No 49
>TIGR00895 2A0115 benzoate transport.
Probab=99.95 E-value=1.5e-25 Score=212.98 Aligned_cols=289 Identities=26% Similarity=0.334 Sum_probs=215.1
Q ss_pred hHHHHHHHHHHHHHHHhhhhhhhhhHHHhhhhhCCCcchhhHHHHHHHHHHHhhhhhhhhHhhHhcCchHHHHHHHHHHH
Q 014481 112 RYKLIGTTSLAFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSL 191 (423)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~ 191 (423)
+++.+....+..+...++........|.+.+++|.+..+.+++.+++.++..++.++.|+++||+|||+.+.++.++.++
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~ 94 (398)
T TIGR00895 15 QWRAIILSFLIMLMDGYDLAAMGFAAPAISAEWGLDPVQLGFLFSAGLIGMAFGALFFGPLADRIGRKRVLLWSILLFSV 94 (398)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHHhHHHHHHhhhHHHHHHHHHHHHH
Confidence 45666666667777777778888889999999999999999999999999999999999999999999999999988888
Q ss_pred HHHHHHHhhhHHHHHHHHHHHHHhhcccchHhHHHHHHhcCCCCchhhHHHHHHhhhhhHHHHHHhhHHHhhhccCchHH
Q 014481 192 ATALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESV 271 (423)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~ 271 (423)
+.++. ...++++.+++.|++.|++.+...+...+++.|++|+++|++++++...+..+|..+++.+++.+.+..||++.
T Consensus 95 ~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~g~~~~ 173 (398)
T TIGR00895 95 FTLLC-ALATNVTQLLILRFLAGLGLGGLMPNLNALVSEYAPKRFRGTAVGLMFCGYPIGAAVGGFLAGWLIPVFGWRSL 173 (398)
T ss_pred HHHHH-HHccchHHHHHHHHHHhcccccchhhHHHHHHHHcCHHhhchhHhhHhhHHHHHHHHHHHHHHHHhhcccceee
Confidence 87766 45677788999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHH-HHHHHhhccCCcCcCCCCCcchhhh--hhhhhhhhh----HHhh-ccc-cCCCcHHHhhhc---HHHH
Q 014481 272 FYIFGLLGIAW-FSGFKILQEGETSNGATLAPRSNYI--NMKKSLSAS----LEEM-GES-LKDVPWKAIFRS---KAVW 339 (423)
Q Consensus 272 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~----~~~~-~~~-~~~~~~~~~~~~---~~~~ 339 (423)
|++.+++.++. .+...+++++++....+..++.... ........+ ..+. .+. .....++.++++ +..+
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (398)
T TIGR00895 174 FYVGGIAPLLLLLLLMRFLPESIDFLVSKRPETVRRIVNAIAPQMQAEAQSALPEQKATQGTKRSVFKALFQGKTARITV 253 (398)
T ss_pred hhhhhhHHHHHHHHHHHhCCCCChHHHhcCHHHHHHHHHHHHHhccccccccccccccccchhhHHHHHHhcchhHHHHH
Confidence 99987665544 4444555554432111100000000 000000000 0000 000 001112222222 3344
Q ss_pred HHHHHHHHHHHHHHHHHhhhhHHHHHhhCCChhhHHHHHHHHHHHHHHHHHHHHHHhHHhhhc
Q 014481 340 AMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIAT 402 (423)
Q Consensus 340 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~r 402 (423)
.+.+..++..........++|.+. +.+|+++.+++.+.....++.+++.++.+++.||+++|
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 315 (398)
T TIGR00895 254 LLWLLYFMLLVGVYFLTNWLPKLM-VELGFSLSLAATGGALFNFGGVIGSIIFGWLADRLGPR 315 (398)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH-HHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchH
Confidence 444555566666777778888555 45799999999999999999999999999999999877
No 50
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=99.95 E-value=5.3e-26 Score=221.41 Aligned_cols=290 Identities=20% Similarity=0.264 Sum_probs=207.5
Q ss_pred HHHHHHHHHHHHHHhhhhhhhhhHHHhhhhhCCC--------cchhhHHHHHHHHHHHhhhhhhhhHhhHhcCchHHHHH
Q 014481 114 KLIGTTSLAFVICNMDKVNLSVAIIPMSHRFGWN--------SSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTG 185 (423)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s--------~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~ 185 (423)
....++.++.++..++.....+.++.+..+++.+ ..+.+++.+++.++..++++++|+++||+|||++++++
T Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~grr~~~~~~ 107 (481)
T TIGR00879 28 LLSLIAAIGGLMFGYDTGVIGGALALPAFEFKFTSANSDSYSSSLWGLVVSIFLVGGFIGALFAGWLSDRFGRKKSLLII 107 (481)
T ss_pred HHHHHHHHHHHhcccccchhhhhhhcHHHHHhcCCcccCCCChhHHHHHHHHHHHHHHHHHHHhhHhhhhhhhHHHHHHH
Confidence 3344444555666677788888888888888777 88999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhhh--HHHHHHHHHHHHHhhcccchHhHHHHHHhcCCCCchhhHHHHHHhhhhhHHHHHHhhH---H
Q 014481 186 VLIWSLATALLPLLAG--FMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLA---P 260 (423)
Q Consensus 186 ~~~~~~~~~~~~~~~~--~~~~~~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~---~ 260 (423)
.++.+++.+++..... +++.++++|++.|++.+...+...+++.|++|+++|++++++++.+..+|.++++.++ +
T Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~~~ 187 (481)
T TIGR00879 108 ALLFVIGAILMGLAAFALSVEMLIVGRVLLGIGVGIASALVPMYLSEIAPKALRGALTSLYQLAITFGILVAYGFGSGKV 187 (481)
T ss_pred HHHHHHHHHHHHHhccccchHHHHHHHHHHHhhhhHHHhHHHHHHHccCChhhhhhhhhHHHHHHHHHHHHHHHHHHHhh
Confidence 9998888877643332 3458999999999999999999999999999999999999999999999999999999 6
Q ss_pred HhhhccCchHHHHHHHHHHHHHHHHHHhhccCCcCcCCCCCcchhhhhhhh---------hhh------hhHHhhccccC
Q 014481 261 PIIENLGWESVFYIFGLLGIAWFSGFKILQEGETSNGATLAPRSNYINMKK---------SLS------ASLEEMGESLK 325 (423)
Q Consensus 261 ~l~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~------~~~~~~~~~~~ 325 (423)
.+.+..+||+.|++.++..++.++..++++|++.....+.+.++......+ ... ....+......
T Consensus 188 ~~~~~~~w~~~f~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (481)
T TIGR00879 188 SLNNTLGWRIPLGLQLIPAGLLFLGLFFLPESPRWLVGKGRVEEARKSLARLRGTSGEDKELLDELELIDIKRSIEKRSV 267 (481)
T ss_pred cCCCCccHHHHHHHHHHHHHHHHHHHhcCCCChHHHHHcCChHHHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHHhhc
Confidence 666778999999997777666666666777654321111110000000000 000 00000000011
Q ss_pred CCcHHHhhh------cHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHhhCCChhhHHHHHHHHHHHHHHHHHHHHHHhHHh
Q 014481 326 DVPWKAIFR------SKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNL 399 (423)
Q Consensus 326 ~~~~~~~~~------~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~ 399 (423)
...+++.++ .+.++...+..+...........+.|.++.+ +|++..+++....+..++.+++.++.|++.||+
T Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~ 346 (481)
T TIGR00879 268 QPSWGSLFSSTRRIRRRLFLGVVLQWFQQFTGINAIMYYSPTIFEN-AGVSTDHAFLVSIIVGAVNFAFTFVAIFLVDRF 346 (481)
T ss_pred cccHHHHHhcCchhHHHHHHHHHHHHHHHHhCCeehHHHHHHHHHH-cCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 111333333 2333333444444444444556667777764 699998888999999999999999999999999
Q ss_pred hhcCC
Q 014481 400 IATGV 404 (423)
Q Consensus 400 ~~r~~ 404 (423)
++|+.
T Consensus 347 ~~~~~ 351 (481)
T TIGR00879 347 GRRPL 351 (481)
T ss_pred cchHH
Confidence 98854
No 51
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=99.95 E-value=5.6e-26 Score=221.49 Aligned_cols=292 Identities=17% Similarity=0.230 Sum_probs=204.0
Q ss_pred hHHHHHHHHHHHHHHHhhhhhhhhhHHHhhhhh--------CCCcchhhHHHHHHHHHHHhhhhhhhhHhhHhcCchHHH
Q 014481 112 RYKLIGTTSLAFVICNMDKVNLSVAIIPMSHRF--------GWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQ 183 (423)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~ 183 (423)
..+.++...++.+...++...+++..+.+++++ +.+..+.+++.+++.++..++++++|+++||+|||++++
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~ig~~~~~~~~G~l~dr~Grr~~~~ 89 (479)
T PRK10077 10 IFSITLVATLGGLLFGYDTAVISGTVESLNTVFVAPQNLSESAANSLLGFCVASALIGCIIGGALGGYCSNRFGRRDSLK 89 (479)
T ss_pred HHHHHHHHHHHHHhcCcccceehHhHHHHHHHhcccccccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHH
Confidence 445666677788888888889998888888877 888999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHh-----------hhHHHHHHHHHHHHHhhcccchHhHHHHHHhcCCCCchhhHHHHHHhhhhhHH
Q 014481 184 TGVLIWSLATALLPLL-----------AGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGS 252 (423)
Q Consensus 184 ~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~ 252 (423)
++.++++++.++.+.. .+.++.++++|+++|++.|...+...++++|++|+++|++++++.+.+..+|.
T Consensus 90 ~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~i~e~~~~~~rg~~~~~~~~~~~~G~ 169 (479)
T PRK10077 90 IAAVLFFISALGSAWPEFGFTSIGPDNTGYVPEFVIYRIIGGIGVGLASMLSPMYIAEIAPAHIRGKLVSFNQFAIIFGQ 169 (479)
T ss_pred HHHHHHHHHHHHHHhhccccccccccchhHHHHHHHHHHHHhhhHhHHhhHHHHHHHhhCChhhhhHHHHHHHHHHHHHH
Confidence 9999988877665431 12356788999999999999999999999999999999999999999999999
Q ss_pred HHHHhhHHHhh--------hccCchHHHHHHHHHHHHHHHHHHhhccCCcCcCCCCCcchhhhhhh-----hhhhhhHHh
Q 014481 253 VAGLLLAPPII--------ENLGWESVFYIFGLLGIAWFSGFKILQEGETSNGATLAPRSNYINMK-----KSLSASLEE 319 (423)
Q Consensus 253 ~~g~~~~~~l~--------~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~ 319 (423)
++++.+++.+. +..|||+.|++.+++.++..+..+++||+++....+.+.++.....+ .......++
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~gWr~~f~~~~~~~~~~~~~~~~l~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (479)
T PRK10077 170 LVVYFVNYFIARSGDASWLNTDGWRYMFASEAIPALLFLMLLYFVPETPRYLMSRGKQEQAEGILRKIMGNTLATQALQE 249 (479)
T ss_pred HHHHHHHHHHhccCcccccccCChHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHcCCHHHHHHHHHHHcCChhHHHHHHH
Confidence 99988776553 35689999999888887776667777776543211111111000000 000000000
Q ss_pred hcccc--CCCcHHHhhhcHHHHH---HHHHHHHHHHHHHHHHhhhhHHHHHhhCCChhhHHHHHHHHHHHHHHHHHHHHH
Q 014481 320 MGESL--KDVPWKAIFRSKAVWA---MIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQ 394 (423)
Q Consensus 320 ~~~~~--~~~~~~~~~~~~~~~~---~~l~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~ 394 (423)
..+.. +....+..+....... .....+....+.+...++.|.+..+ .|++....++.....+++.+++.++.++
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~~~-~g~~~~~~~~~~~~~~~~~~i~~~~~g~ 328 (479)
T PRK10077 250 IKHSLDHGRKTGGKLLMFGVGVIVIGVMLSVFQQFVGINVVLYYAPEIFKT-LGASTDIALLQTIIVGVINLTFTVLAIM 328 (479)
T ss_pred HHHHHHHhhhhhhhhcchhHHHHHHHHHHHHHHHHhChhHHHHHHHHHHHH-cCCCCchHHHHHHHHHHHHHHHHHHHHH
Confidence 00000 0000001111000000 0111122222233445566777664 6888877778888888999999999999
Q ss_pred HhHHhhhcCC
Q 014481 395 FADNLIATGV 404 (423)
Q Consensus 395 l~dr~~~r~~ 404 (423)
++||+++|+.
T Consensus 329 l~dr~g~r~~ 338 (479)
T PRK10077 329 TVDKFGRKPL 338 (479)
T ss_pred HHHHhcChHH
Confidence 9999998854
No 52
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=99.95 E-value=3.5e-25 Score=210.20 Aligned_cols=268 Identities=16% Similarity=0.180 Sum_probs=214.3
Q ss_pred HHHHHHHHHHHHhhhhhhhhhHHHhhhhhCCCcchhhHHHHHHHHHHHhhhhhhhhHhhHhcCchHHHHHHHHHHHHHHH
Q 014481 116 IGTTSLAFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATAL 195 (423)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~ 195 (423)
+..+++.++..++......+.+|.+++++|++..+.|++.+.+.+++.+++++.|++.||+|||++++++.++++++.++
T Consensus 5 ~~~~~~~f~~~G~~~~~~~~l~~~~~~~~~~s~~~~g~l~s~~~~g~~i~~~~~g~l~~r~G~r~~~~~g~~l~~~g~~l 84 (410)
T TIGR00885 5 FALITSLFALWGFANDITNPMVPQFQQAFTLTAFQAALVQSAFYGGYFIMAIPAAIFMKKLSYKAGILLGLFLYALGAFL 84 (410)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHH
Confidence 45666777777788888899999999999999999999999999999999999999999999999999999999998876
Q ss_pred HHHh--hhHHHHHHHHHHHHHhhcccchHhHHHHHHhcCCCCchhhHHHHHHhhhhhHHHHHHhhHHHhhhc--------
Q 014481 196 LPLL--AGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIEN-------- 265 (423)
Q Consensus 196 ~~~~--~~~~~~~~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~-------- 265 (423)
+... .++++.+++.|++.|+|.+...+....++.+..|+++|++.+++.+...++|..+||.+++.+...
T Consensus 85 ~~~~~~~~~~~~~l~~~~l~G~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~~g~~i~~~l~~~~~~~~~~~ 164 (410)
T TIGR00885 85 FWPAAEIMNYTLFLVGLFILTAGLGFLETAANPYILVMGPESTATRRLNLAQSFNPFGSIIGMVVAQQLILSNLPHQSQD 164 (410)
T ss_pred HHHHHhhccHHHHHHHHHHHHhhHHHHHhhhhHHHHHHCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccchhh
Confidence 5322 357788999999999999999999999999999999999999999999999999999999877532
Q ss_pred ------------------cCchHHHHHHHHHHHHHHHHHHhhccCCcCcCCCCCcchhhhhhhhhhhhhHHhhccccCCC
Q 014481 266 ------------------LGWESVFYIFGLLGIAWFSGFKILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDV 327 (423)
Q Consensus 266 ------------------~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 327 (423)
.+||++|++.+++.++..+...+.+.++.++ .+ .+++ ....
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~w~~~fl~~a~~~~~~~~~~~~~~~p~~~~-~~-~~~~-------------------~~~~ 223 (410)
T TIGR00885 165 VLDKLSPEELSAIKHSDLASVQTPYMIIGAVVLAVALLIMLTKMPALNH-SD-AKQI-------------------SFSA 223 (410)
T ss_pred hhhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCc-cc-cccc-------------------cchh
Confidence 3699999998887766544443332221111 00 0000 0001
Q ss_pred cHHHhhhcHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHhh-CCChhhHHHHHHHHHHHHHHHHHHHHHHhHHhhhcCC
Q 014481 328 PWKAIFRSKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEEL-SLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGV 404 (423)
Q Consensus 328 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~r~~ 404 (423)
+.++++++|.++...+..+++...+.+..++++.|.++.. +.+...++...+....+..+|+++++++.||+++|+.
T Consensus 224 ~~~~~~~~~~~~~~~l~~f~yvg~e~~~~s~l~~y~~~~~~~~~~~~a~~~~~~~~~~~~vGR~~~~~l~~r~~~~~~ 301 (410)
T TIGR00885 224 SLSRLARIRHYREGVIAQFFYVGVQIMCWTFIIQYAVRLIPGMTAGFAANYNIGAMVIFFISRFIGTWLISYLAAHKV 301 (410)
T ss_pred hHHHHHhChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHH
Confidence 2457889999999888888888888888899999997632 4444555656666778889999999999999988753
No 53
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.94 E-value=3.3e-25 Score=209.42 Aligned_cols=262 Identities=15% Similarity=0.104 Sum_probs=206.2
Q ss_pred HHHHHHHHHHHHHHhhhhhhhhhHHHhhhhhCCCcchhhHHHHHHHHHHHhhhhhhhhHhhHhcCchHHHHHHHHHHHHH
Q 014481 114 KLIGTTSLAFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLAT 193 (423)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~ 193 (423)
+.+..++++.++..+......+.+|.+.+++|.|..++|++.+.+.++..+++++.|+++||+|||+++..+.++.+++.
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~s~~~~G~~~s~~~l~~~~~~~~~g~l~dr~g~k~~~~~~~~~~~~~~ 85 (381)
T PRK03633 6 RPVLLLLCGLLLLTLAIAVLNTLVPLWLAQEHLPTWQVGVVSSSYFTGNLVGTLLAGYVIKRIGFNRSYYLASLIFAAGC 85 (381)
T ss_pred HHHHHHHHHHHHHHHhhhhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44667777888888899999999999999999999999999999999999999999999999999999999999998888
Q ss_pred HHHHHhhhHHHHHHHHHHHHHhhcccchHhHHHHHHhcCCCCchhhHHHHHHhhhhhHHHHHHhhHHHhhhccCchHHHH
Q 014481 194 ALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFY 273 (423)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~~~ 273 (423)
+++ ..+++++.++++|+++|++.+...+...+.+.+..++++|+++++++..+.++|..+||.+++.+.+...|.. .+
T Consensus 86 ~~~-~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~-~~ 163 (381)
T PRK03633 86 AGL-GLMVGFWSWLAWRFVAGIGCAMIWVVVESALMCSGTSRNRGRLLAAYMMVYYLGTVLGQLLVSKVSTELMSVL-PW 163 (381)
T ss_pred HHH-HHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccchH-HH
Confidence 776 4577889999999999999998888888888888998999999999999999999999999999877543333 33
Q ss_pred HHHHHHHHHHHHHHhhccCCcCcCCCCCcchhhhhhhhhhhhhHHhhccccCCCcHHHhhhcHHHHHHHHHHHHHHHHHH
Q 014481 274 IFGLLGIAWFSGFKILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHY 353 (423)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 353 (423)
..+......+. ..+.+.+++..+ + + +..++++.+++|.++......+.....+.
T Consensus 164 ~~~~~~~~~~~-~~~~~~~~~~~~-~---~---------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (381)
T PRK03633 164 VTGLVLAAILP-LLFTRILNQQAE-N---H---------------------DSTSIWPMLKLRQARLGVNGCIISGIVLG 217 (381)
T ss_pred HHHHHHHHHHH-HHHhcccCCCCC-C---C---------------------CCCCHHHHHHhcchHHHHHHHHHHHHHHH
Confidence 33322222211 122222111100 0 0 01124567788877765554555555566
Q ss_pred HHHhhhhHHHHHhhCCChhhHHHHHHHHHHHHHHHHHHHHHHhHHhhhcCC
Q 014481 354 TCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGV 404 (423)
Q Consensus 354 ~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~r~~ 404 (423)
....++|.|+++ .|.++.+++.+.+...++.++++++.|++.||+++|+.
T Consensus 218 ~~~~~lp~~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~~~~~~ 267 (381)
T PRK03633 218 SLYGLMPLYLNH-QGMSDASIGFWMALLVSAGILGQWPIGRLADRFGRLLV 267 (381)
T ss_pred HHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHcCcHHH
Confidence 667789999986 59999999999999999999999999999999998743
No 54
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=99.94 E-value=3.6e-25 Score=209.58 Aligned_cols=266 Identities=14% Similarity=0.087 Sum_probs=204.8
Q ss_pred HHHHHHHHHHhhhhhhhhhHHHhhhhhCCCcchhhHHHHHHHHHHHhhhhhhhhHhhHhcCchHHHHHHHHHHHHHHHHH
Q 014481 118 TTSLAFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLP 197 (423)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~ 197 (423)
.++++.++..++........+.+.+++|.+..+.+++.+.+.+++.++.+++|+++||+|||++++++.++.+++.+++.
T Consensus 7 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~l~~~l~~~~~G~laDr~grr~vl~~~~~~~~~~~~~~~ 86 (393)
T PRK11195 7 AIMAAQFFSALADNALLFAAIALLKELHYPDWSQPLLQMFFVLAYIVLAPFVGAFADSFPKGRVMFIANGIKLLGCLLML 86 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHhhhhHhhhccCCchhhHHHHHHHHHHHHHHH
Confidence 45666777777666666666677889999999999999999999999999999999999999999999999888776653
Q ss_pred HhhhHHHHHHHHHHHHHhhcccchHhHHHHHHhcCCCCchhhHHHHHHhhhhhHHHHHHhhHHHhhhccCchHHHHHHHH
Q 014481 198 LLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGL 277 (423)
Q Consensus 198 ~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~~~~~~~ 277 (423)
+..+ .++.|+++|++.+...|...+++.|++|+++|++++|+.+....+|.++||.++|.+.+. .|+..+.+.+.
T Consensus 87 -~~~~---~~~~r~l~G~~~a~~~pa~~a~i~~~~~~~~~~~a~~~~~~~~~~~~~~Gp~lgG~l~~~-~~~~~~~i~~~ 161 (393)
T PRK11195 87 -FGIH---PLLAYGLVGIGAAAYSPAKYGILTELLPGEKLVKANGWMEGSTIAAILLGTVLGGALADP-HAEAALAVCAL 161 (393)
T ss_pred -HHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHH
Confidence 3444 277899999999999999999999999999999999999999999999999999999885 47777777666
Q ss_pred HHHHHHHHHHhhccCCcCcCCCCCcchhhhhhhhhhhhhHHhhccccCCCcHHHhhhcHHHHHHHHHHHHHHHHHHHHHh
Q 014481 278 LGIAWFSGFKILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLS 357 (423)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 357 (423)
..++..+..+.+|+++.++...+.+... ..+. .. ..++.++++|.+....+..++..........
T Consensus 162 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~---~~~~---~~---------~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (393)
T PRK11195 162 IYLLAALFNLFIPRLGARRPGQSWNPIA---LLRD---FF---------HACRVLWRDKLGRFSLAGTTLFWGAGATLRF 226 (393)
T ss_pred HHHHHHHHHhcCCCCcccccccCCCHHH---HHHH---HH---------HHHHHHHhCchhHHHHHHHHHHHHHHHHHHH
Confidence 5555555555666543221111100000 0000 00 0135678888776655555454555556667
Q ss_pred hhhHHHHHhhCCChhhHHHHHHHHHHHHHHHHHHHHHHhHHhhhcC
Q 014481 358 WLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATG 403 (423)
Q Consensus 358 ~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~r~ 403 (423)
.+|.|+++.+|+++.+.|++.+...++.+++.++.+++.||.++++
T Consensus 227 ~~~~~~~~~lg~s~~~~G~~~~~~~~g~i~g~~~~~~l~~~~~~~~ 272 (393)
T PRK11195 227 LVLAWAPVALGITLNQPAYLQAVVAIGIAVGAGAAARLVTLETVLR 272 (393)
T ss_pred HHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHhcCCcccc
Confidence 7788888889999999999999999999999999999999877664
No 55
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.94 E-value=3e-25 Score=217.34 Aligned_cols=293 Identities=17% Similarity=0.185 Sum_probs=210.4
Q ss_pred hhHHHHHHHHHHHHHHHhhhhhhhhhHHHhhhhhCCCcchhhHHHHHHHHHHHhhhhhhhhHhhHhcCchHHHHHHHHHH
Q 014481 111 QRYKLIGTTSLAFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWS 190 (423)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~ 190 (423)
++|+.+..++++.++..++.....+.+|.+.+++|++..+.+++.+.+.+++.++.++.|+++||+|||++++++.++.+
T Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~ 96 (496)
T PRK03893 17 AQWKAFSAAWLGYLLDGFDFVLITLVLTEVQGEFGLTTVQAASLISAAFISRWFGGLLLGAMGDRYGRRLAMVISIVLFS 96 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHH
Confidence 45677788888899999999999999999999999999999999999999999999999999999999999999999988
Q ss_pred HHHHHHHHhhhHHHHHHHHHHHHHhhcccchHhHHHHHHhcCCCCchhhHHHHHHhhhhhHHHHHHhhHHHhhhccCchH
Q 014481 191 LATALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWES 270 (423)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~ 270 (423)
++.++. ...++++.+++.|++.|++.+...+....++.|++|+++|+++++++..+..+|..++|.+++.+.+..+||+
T Consensus 97 ~~~~~~-~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~w~~ 175 (496)
T PRK03893 97 VGTLAC-GFAPGYWTLFIARLVIGMGMAGEYGSSATYVIESWPKHLRNKASGFLISGFSIGAVVAAQVYSLVVPVWGWRA 175 (496)
T ss_pred HHHHHH-HHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCHHH
Confidence 888777 4567789999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhccCCcCcCCCCCcchhhhhhhhhhhhhHHh---------------hccccCCCcHH-----
Q 014481 271 VFYIFGLLGIAWFSGFKILQEGETSNGATLAPRSNYINMKKSLSASLEE---------------MGESLKDVPWK----- 330 (423)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~----- 330 (423)
.|++.++..++.++....+|++++....+..........+......... .........+.
T Consensus 176 ~f~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (496)
T PRK03893 176 LFFIGILPIIFALWLRKNLPEAEDWKEKHAGKAPVRTMVDILYRGEHRIINILLTLAAAAALWFCFAGNLQNAAIVAVLG 255 (496)
T ss_pred HHHHHHHHHHHHHHHHHhCCCchhhhhhccccccchhHHHHHhcchhHHHHHHHHHHHHHHHHHHHHhhhcchhHHHHHH
Confidence 9987544444333333334443221111100000000000000000000 00000000000
Q ss_pred ------------Hh--hhcHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHhhCCChhhHHHHHHHHHHHHHHHHHHHHHHh
Q 014481 331 ------------AI--FRSKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFA 396 (423)
Q Consensus 331 ------------~~--~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~ 396 (423)
+. .+.+......+..+...........++|.|+++.+|++..+++.+.+...++.+++.++.|++.
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~ 335 (496)
T PRK03893 256 LLCAAIFISFMVQSSGKRWPTGVMLMVVVLFAFLYSWPIQALLPTYLKTDLGYDPHTVANVLFFSGFGAAVGCCVGGFLG 335 (496)
T ss_pred HHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHhccchHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 00 0001111111111111111123457899999877899999999999999999999999999999
Q ss_pred HHhhhcCC
Q 014481 397 DNLIATGV 404 (423)
Q Consensus 397 dr~~~r~~ 404 (423)
||+++|+.
T Consensus 336 dr~g~~~~ 343 (496)
T PRK03893 336 DWLGTRKA 343 (496)
T ss_pred HHhcchHH
Confidence 99998854
No 56
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.94 E-value=5.7e-25 Score=207.52 Aligned_cols=259 Identities=14% Similarity=0.012 Sum_probs=200.0
Q ss_pred HHHHHHHhhhhhhhhhHHH-hhhhhCCCcchhhHHHHHHHHHHHhhhhhhhhHhhHhcCchHHHH-HHHHHHHHHHHHHH
Q 014481 121 LAFVICNMDKVNLSVAIIP-MSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQT-GVLIWSLATALLPL 198 (423)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~-~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~-~~~~~~~~~~~~~~ 198 (423)
+.+++..+......+.+|. +.+++|.+..+.|++.+++.+...+.+++.|+++||+|||+.+++ +.++..++.+++ .
T Consensus 4 ~~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~~~~~~~~-~ 82 (375)
T TIGR00899 4 LVAFLTGIAGALQFPTLSLFLSEEVRARPAMIGLFYTGSAIVGIAVSQLLATRSDYQGDRKGLILFCCLLAALACLLF-A 82 (375)
T ss_pred HHHHHHHHHHHHHhhHHHHHHHcccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHHH-H
Confidence 4566777777888888887 568899999999999999999999999999999999999987665 444444454454 5
Q ss_pred hhhHHHHHHHHHHHHHhhcccchHhHHHHHHhcCCCCchhhH--HHHHHhhhhhHHHHHHhhHHHhhhccCchHHHHHHH
Q 014481 199 LAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRA--VSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFG 276 (423)
Q Consensus 199 ~~~~~~~~~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~--~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~~~~~~ 276 (423)
.+++++.+++.|++.|.+.+...|...+++.++.++++|+++ .++...+.++|.++||++++.+.+..|||+.|++.+
T Consensus 83 ~~~~~~~l~~~~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~~~~~~~~f~~~~ 162 (375)
T TIGR00899 83 WNRNYFLLLVLGVLLSSFASTANPQLFALAREHADRTGREAVMFSSVMRAQISLAWVIGPPLAFWLALGFGFTVMFLTAA 162 (375)
T ss_pred hcchHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhhcchhhHHHHHHHHHHHhHHHHHhhhHHHHHHHhcccHHHHHHHH
Confidence 667778888899999888888888888888998887777654 678888899999999999999999899999999998
Q ss_pred HHHHHHHHHH-HhhccCCcCcCCCCCcchhhhhhhhhhhhhHHhhccccCCCcHHHhhhcHHHHHHHHHHHHHHHHHHHH
Q 014481 277 LLGIAWFSGF-KILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTC 355 (423)
Q Consensus 277 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 355 (423)
++.++..+.. +++||.++....+. + ..++++.++++.++...+..++........
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~---~---------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (375)
T TIGR00899 163 LAFVLCGVLVWLFLPSYPRGAPGAL---T---------------------RLEVRGLLASRDTRLLFVACTLMWGCNILY 218 (375)
T ss_pred HHHHHHHHHHHHhCCCcccCccccc---C---------------------cchhhhhhcCcchHHHHHHHHHHHHHHHHH
Confidence 8876665444 34555432211100 0 001234566777776665555555555666
Q ss_pred HhhhhHHHHHhhCCChhhHHHHHHHHHHHHHHHHHHHHHHhHHhhhcCC
Q 014481 356 LSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGV 404 (423)
Q Consensus 356 ~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~r~~ 404 (423)
..++|.|+++.+|.++.+.+.+.....+..+++.++.|++.||+++|+.
T Consensus 219 ~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~r~g~~~~ 267 (375)
T TIGR00899 219 IINMPLLIIHELGLPDKLAGLMMGTAAGLEIPFMLLAGYLIKRFGKRRL 267 (375)
T ss_pred HhhhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhcchhH
Confidence 7788999988889999999988888777888899999999999998854
No 57
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=99.94 E-value=1.5e-25 Score=219.19 Aligned_cols=294 Identities=17% Similarity=0.181 Sum_probs=208.9
Q ss_pred hhHHHHHHHHHHHHHHHhhhhhhhhhHHHhhhhh-----CCCcchhhHHHHHHHHHHHhhhhhhhhHhhHhcCchHHHHH
Q 014481 111 QRYKLIGTTSLAFVICNMDKVNLSVAIIPMSHRF-----GWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTG 185 (423)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~ 185 (423)
.+++.+.++.++.+..+++....+...|.+..++ +.+..+.+++.+.+.+++.++.+++|+++||+|||+++.++
T Consensus 13 ~~~~~~~~~~~~~~~~g~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~ig~~~~g~l~d~~Grr~~~~~~ 92 (502)
T TIGR00887 13 QHFRAIVIAGVGFFTDSYDLFCISLVTKMLGYVYYHGKGPLPSSVSAAVNGSASIGTLAGQLFFGWLADKLGRKRVYGME 92 (502)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHH
Confidence 3556777788888889999999998888876642 34556778999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhhh-----HHHHHHHHHHHHHhhcccchHhHHHHHHhcCCCCchhhHHHHHHhhhhhHHHHHHhhHH
Q 014481 186 VLIWSLATALLPLLAG-----FMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAP 260 (423)
Q Consensus 186 ~~~~~~~~~~~~~~~~-----~~~~~~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~ 260 (423)
.+++.++.++.....+ +++.++++|++.|++.+...+....++.|++|+++|++++++.+....+|.++++.++.
T Consensus 93 ~~~~~v~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~g~~~g~~~~~ 172 (502)
T TIGR00887 93 LIIMIIATVASGLSPGSSPKSVMATLCFWRFWLGVGIGGDYPLSAIITSEFATKKWRGAMMAAVFAMQGFGILAGAIVAL 172 (502)
T ss_pred HHHHHHHHHHHHHccCcccchHHHHHHHHHHHHHHHHhhhhHHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9998888876643222 26789999999999999999999999999999999999999999999999999998887
Q ss_pred Hhhh-----------------------ccCchHHHHHHHHHHHHHHHHHHhhccCCcCcCCCCCcch-hhhhhhh----h
Q 014481 261 PIIE-----------------------NLGWESVFYIFGLLGIAWFSGFKILQEGETSNGATLAPRS-NYINMKK----S 312 (423)
Q Consensus 261 ~l~~-----------------------~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~----~ 312 (423)
.+.. ..+||+.+.+.++..++.++..+++||+++....+.++++ ......+ .
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~WR~~~~~~~ip~~i~~~~~~~lpESpr~l~~~~~~~~~a~~~~~~~~~~~ 252 (502)
T TIGR00887 173 IVLAGFKHSLEAAADEASCTGSCVPAVDYMWRILIGFGAVPALLALYFRLTIPETPRYTADVAKDVEQAASDMSAVLQVK 252 (502)
T ss_pred HHHHHhccccccccccccccccccchhcccHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHhCcchHHHHHHHHHHhccc
Confidence 6532 1379999988888888777777888998875322211111 1100000 0
Q ss_pred hhhhHH---hhc--cccCCCcHHHhhhc---HHH----HHHHHHHHHHHHHHHHHHhhhhHHHHHhhCCChhhHHH----
Q 014481 313 LSASLE---EMG--ESLKDVPWKAIFRS---KAV----WAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAW---- 376 (423)
Q Consensus 313 ~~~~~~---~~~--~~~~~~~~~~~~~~---~~~----~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~---- 376 (423)
..++.+ +.+ ++..+.++++++++ ++. +...+..+...+.+++...+.|.++++ .|++...++.
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~p~i~~~-~G~~~~~~~~~~~~ 331 (502)
T TIGR00887 253 IEAEPDEVEKASTAVEVPKASWSDFFTHFFKWRHGKHLLGTAGSWFLLDIAFYGVNLNQKVILSA-IGYSPPAATNNAYE 331 (502)
T ss_pred cccCcccccchhccccchhhhHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHccccccHHHHHH-HcCCCCccchhHHH
Confidence 000000 000 01111357777653 222 112223344445566777788999875 6887543221
Q ss_pred --------HHHHHHHHHHHHHHHHHHHhHHhhhcCCc
Q 014481 377 --------VSILPPLASVLVTSIAAQFADNLIATGVE 405 (423)
Q Consensus 377 --------~~~~~~~~~~~~~~~~g~l~dr~~~r~~~ 405 (423)
...+..++.+++.++.++++||+|||+..
T Consensus 332 ~~~~~~~~~~~~~~~~~i~g~~~~~~l~dr~gRR~~l 368 (502)
T TIGR00887 332 ELYKTAVGNLIIALAGTVPGYWVTVFLVDIIGRKPIQ 368 (502)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcchhHH
Confidence 23344556777889999999999998653
No 58
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=99.94 E-value=2.4e-25 Score=208.48 Aligned_cols=247 Identities=17% Similarity=0.224 Sum_probs=199.4
Q ss_pred hhhhhhhhHHHhhhhhCCCcchhhHHHHHHHHHHHhhhhhhhhHhhHhcCchHHHHHHHHHHHHHHHHHHhhhHHHHHHH
Q 014481 129 DKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPLLAGFMPGLVL 208 (423)
Q Consensus 129 ~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (423)
.....++.+|.+.+++|++..+.+++.+++.+++.++.++.|+++||+|||+++.++.++.+++.+.. ..++.+.+++
T Consensus 15 ~~~~~~~~lp~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~--~~~~~~~l~~ 92 (355)
T TIGR00896 15 ALTSVGPLLPQIRSALGMSFSVAGLLTALPVLCFAVLAPLAPWLARRFGEERSVAAGLLLIAAGILIR--SAPGTALLFA 92 (355)
T ss_pred ccccCcccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCchHHHHHHHHHHHHHHHHH--HhccHHHHHH
Confidence 33567788999999999999999999999999999999999999999999999999988877776554 4566788889
Q ss_pred HHHHHHhhcccchHhHHHHHHhcCCCCchhhHHHHHHhhhhhHHHHHHhhHHHhhhcc--CchHHHHHHHHHHHHHHHHH
Q 014481 209 SRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENL--GWESVFYIFGLLGIAWFSGF 286 (423)
Q Consensus 209 ~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~--gw~~~~~~~~~~~~~~~~~~ 286 (423)
.|++.|++.+...+....++.++++ ++|++++++++...++|..+++.+++.+.+.. +||+.|.+.+++.++..+
T Consensus 93 ~~~~~g~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~i~~~~~~~l~~~~~~~w~~~f~~~~~~~~~~~~-- 169 (355)
T TIGR00896 93 GTALIGVGIAIINVLLPSLIKRDFP-QRVGLMTGLYSMALMGGAALAAAATVPLAQHSGGHWQQALAWWALPALLALL-- 169 (355)
T ss_pred HHHHHHHHHHHHhccchHHHHHhCc-chhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHH--
Confidence 9999999998887788888899886 68999999999999999999999999888764 399988877665443322
Q ss_pred HhhccCCcCcCCCCCcchhhhhhhhhhhhhHHhhccccCCCcHHHhhhcHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHh
Q 014481 287 KILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEE 366 (423)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 366 (423)
.++++.++++..+. + ......++++|+|.++...+..++....++....++|.|+++
T Consensus 170 ~~~~~~~~~~~~~~-~---------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~- 226 (355)
T TIGR00896 170 AWIPQVRRRVAANQ-T---------------------TTRLTPVRIWRSPLAWQVTVFFGLQSGLYYSLIGWLPAILIS- 226 (355)
T ss_pred HHhhhhccccCCCC-C---------------------CCCCCCchhhcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-
Confidence 23333222111000 0 001124567889999888777777777888888999999986
Q ss_pred hCCChhhHHHHHHHHHHHHHHHHHHHHHHhHHhhhcC
Q 014481 367 LSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATG 403 (423)
Q Consensus 367 ~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~r~ 403 (423)
+|++..+++.+.+...++.++++++.|++.||+++|+
T Consensus 227 ~g~~~~~~g~~~~~~~~~~i~~~~~~g~l~dr~~~~~ 263 (355)
T TIGR00896 227 HGASAATAGSLLALMQLAQAASALLIPALARRVKDQR 263 (355)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHHhHHHHHhhhccch
Confidence 6999999999999999999999999999999996543
No 59
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.94 E-value=2.9e-24 Score=204.41 Aligned_cols=259 Identities=18% Similarity=0.136 Sum_probs=195.3
Q ss_pred HHHHHHHHHHHHHHHhhhhhhhhhHHH-hhhhhCCCcchhhHHHHHHHHHHHhhhhhhhhHhhHhcCchHHHHHHHHHHH
Q 014481 113 YKLIGTTSLAFVICNMDKVNLSVAIIP-MSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSL 191 (423)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~ 191 (423)
++.+..+.+..++..++..+..+.+|. +.+++|.++.+.|++.+++.+++.+++++.|+++||+|||++++.+.+++++
T Consensus 14 ~~~~~~l~~~~~~~~~~~~~~~~~l~~~i~~~~g~s~~~~g~~~~~~~~~~~i~~~~~G~l~Dr~g~r~~l~~~~~~~~~ 93 (399)
T PRK05122 14 TLRIVSIVMFTFISYLTIGLPLAVLPGYVHDQLGFSAFLAGLVISLQYLATLLSRPHAGRYADTLGPKKAVVFGLCGCAL 93 (399)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHhchhhHhHHhccCCcchHHHHHHHHHH
Confidence 355667778888888888888889887 6788999999999999999999999999999999999999999999988777
Q ss_pred HHHHHHHh--h-----hHHHHHHHHHHHHHhhcccchHhHHHHHHhcCCCCchhhHHHHHHhhhhhHHHHHHhhHHHhhh
Q 014481 192 ATALLPLL--A-----GFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIE 264 (423)
Q Consensus 192 ~~~~~~~~--~-----~~~~~~~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~ 264 (423)
+.+++... . .+++.+++.|+++|++.+...+...+++.+++|+++|++++++...+..+|.++|+.+++.+.+
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~ 173 (399)
T PRK05122 94 SGLLYLLAGLLAAWPVLSLLLLLLGRLLLGIGESLAGTGSILWGIGRVGALHTGRVISWNGIATYGALAIGAPLGVLLYH 173 (399)
T ss_pred HHHHHHHhhhhhccchhHHHHHHHHHHHHHhhHHhhcchHHHHHHhhcChhhhccchhhhhhhhhHHHHHHHHHHHHHHH
Confidence 65544222 1 2456789999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCchHHHHHHHHHHHHHHHHHHhhccCCcCcCCCCCcchhhhhhhhhhhhhHHhhccccCCCcHHHhhhcHHHHHHHHH
Q 014481 265 NLGWESVFYIFGLLGIAWFSGFKILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYA 344 (423)
Q Consensus 265 ~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 344 (423)
..||++.+++.+++.++..+.....++.++ .+ +++ .++++.++ .++.....
T Consensus 174 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~---~~~---------------------~~~~~~~~--~~~~~~~~ 224 (399)
T PRK05122 174 WGGLAGLGLLIMLLALLGLLLARPRPAVPP---VK---GER---------------------LPFRRVLG--RVWPYGMG 224 (399)
T ss_pred cccHHHHHHHHHHHHHHHHHHHhcCCCCCC---CC---ccc---------------------hhHHHHHH--HHHHHHHH
Confidence 999999888766655443322221111110 00 000 01222222 12222223
Q ss_pred HHHHHHHHHHHHhhhhHHHHHhhCCChhhHHHHHHHHHHHHHHHHHHHHHHhHHhhhcC
Q 014481 345 HFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATG 403 (423)
Q Consensus 345 ~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~r~ 403 (423)
.++....+.....+++.|+.+ .|+ .+.+.......++.++++++.|++.||+++|+
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~-~~~--~~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~ 280 (399)
T PRK05122 225 LALASIGFGTIATFITLYYAA-RGW--DGAALALTLFGVAFVGARLLFGNLINRLGGLR 280 (399)
T ss_pred HHHHHHHHHHHHHHHHHHHHH-ccc--ccchHHHHHHHHHHHHHHHHHHHHHHHhccHH
Confidence 334445556667788888875 466 34566677888899999999999999998774
No 60
>PRK12382 putative transporter; Provisional
Probab=99.93 E-value=7.4e-24 Score=201.11 Aligned_cols=258 Identities=16% Similarity=0.143 Sum_probs=186.8
Q ss_pred HHHHHHHHHHHHHhhhhhhhhhHHH-hhhhhCCCcchhhHHHHHHHHHHHhhhhhhhhHhhHhcCchHHHHHHHHHHHHH
Q 014481 115 LIGTTSLAFVICNMDKVNLSVAIIP-MSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLAT 193 (423)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~ 193 (423)
.+..+.++.++..+......+.+|. +.+++|.|..++|++.+++.+++.++++++|+++||+|||++++++.++..++.
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~p~l~~~l~~~lg~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~ 95 (392)
T PRK12382 16 SLFRIAFAVFLTYMTVGLPLPVIPLFVHHDLGFGNTMVGIAVGIQFLATVLTRGYAGRLADQYGAKRSALQGMLACGLAG 95 (392)
T ss_pred cHHHHHHHHHHHHHHHHHHhhhhhHHHHHhcCCcHHHHHHHHHHHHHHHHHHhhhhhHHHHhhcchHHHHHHHHHHHHHH
Confidence 3444555666667777788888886 578999999999999999999999999999999999999999999887766654
Q ss_pred HHHHH-------hhhHHHHHHHHHHHHHhhcccchHhHHHHHHhcCCCCchhhHHHHHHhhhhhHHHHHHhhHHHhhhcc
Q 014481 194 ALLPL-------LAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENL 266 (423)
Q Consensus 194 ~~~~~-------~~~~~~~~~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~ 266 (423)
+.... ...+++.++++|+++|++.+...+...+++.+++|+++|++++++++.+..+|..+||++++.+.+..
T Consensus 96 ~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~a~~~~~~~~~~g~~~g~~~~~~l~~~~ 175 (392)
T PRK12382 96 LAYLLAAILPVSAPFKFALLVVGRLILGFGESQLLTGALTWGLGLVGPKHSGKVMSWNGMAMYGALAAGAPLGLLLHSHF 175 (392)
T ss_pred HHHHhhhccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCccccchhhhHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 32211 13567889999999999999888888899999999999999999999999999999999999999989
Q ss_pred CchHHHHHHHHHHHHHHHHHHhhccCCcCcCCCCCcchhhhhhhhhhhhhHHhhccccCCCcHHHhhhcHHHHHHHHHHH
Q 014481 267 GWESVFYIFGLLGIAWFSGFKILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHF 346 (423)
Q Consensus 267 gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 346 (423)
||++.+.+..+..++........++.+++ + +++ . ++++.++ .++...+..+
T Consensus 176 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~--~~~------~----------------~~~~~~~--~~~~~~~~~~ 226 (392)
T PRK12382 176 GFAALALTTMVLPLLAWAFNGTVRKVPAH---A--GER------P----------------SLWSVVG--LIWKPGLGLA 226 (392)
T ss_pred ChHHHHHHHHHHHHHHHHHHHhccCCCCC---c--ccC------c----------------hHHHHHH--HHHHhHHHHH
Confidence 99987766544433332222112221110 0 000 0 0111111 1222222223
Q ss_pred HHHHHHHHHHhhhhHHHHHhhCCChhhHHHHHHHHHHHHHHHHHHHHHHhHHhhhcCC
Q 014481 347 CGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGV 404 (423)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~r~~ 404 (423)
+..........+.+.|+++ .|++. .++......++.++++++.|++.||+++|+.
T Consensus 227 l~~~~~~~~~~~~~~~~~~-~~~~~--~~~~~~~~~~~~~~~~~~~g~l~~r~g~~~~ 281 (392)
T PRK12382 227 LQGVGFAVIGTFVSLYFAS-KGWAM--AGFTLTAFGGAFVLMRVLFGWMPDRFGGVKV 281 (392)
T ss_pred HHHHHHhHHHHHHHHHHHh-cCCch--hHHHHHHHHHHHHHHHHHHHHHHHhcCCCee
Confidence 3344555666788888876 46653 4566667778889999999999999998754
No 61
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.93 E-value=7.9e-24 Score=197.53 Aligned_cols=240 Identities=33% Similarity=0.525 Sum_probs=216.6
Q ss_pred HHHHHHHHHHhhhhhhhhhHHHhhhhhCCCcchhhHHHHHHHHHHHhhhhhhhhHhhHhcCchHHHHHHHHHHHHHHHHH
Q 014481 118 TTSLAFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLP 197 (423)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~ 197 (423)
.+.+..+...+......+..|.+.+++|.+..+.+++.+...++..++.++.|+++||+|||+.+.++.++..++.++.
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~d~~g~r~~~~~~~~~~~~~~~~~- 81 (352)
T cd06174 3 LLFLGFFLSGLDRGLLSPALPLLAEDLGLSASQAGLIVSAFSLGYALGSLLAGYLSDRFGRRRVLLLGLLLFALGSLLL- 81 (352)
T ss_pred HHHHHHHHHHHhhhhhHhhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCchhhHHHHHHHHHHHHHH-
Confidence 3455667777888888999999999999999999999999999999999999999999999999999999998888777
Q ss_pred HhhhHHHHHHHHHHHHHhhcccchHhHHHHHHhcCCCCchhhHHHHHHhhhhhHHHHHHhhHHHhhhccCchHHHHHHHH
Q 014481 198 LLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGL 277 (423)
Q Consensus 198 ~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~~~~~~~ 277 (423)
...++++.++++|++.|++.+...+...+++.|++|+++|++++++.+....+|..++|.+++.+.+..+|++.+++.++
T Consensus 82 ~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (352)
T cd06174 82 AFASSLWLLLVGRFLLGLGGGALYPAAAALIAEWFPPKERGRALGLFSAGFGLGALLGPLLGGLLAESLGWRWLFLILAI 161 (352)
T ss_pred HHhccHHHHHHHHHHHHcccccccHhHHHHHHHhCCccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHH
Confidence 45577899999999999999999999999999999999999999999999999999999999999999899999999888
Q ss_pred HHHHHHHHHHhhccCCcCcCCCCCcchhhhhhhhhhhhhHHhhccccCCCcHHHhhhcHHHHHHHHHHHHHHHHHHHHHh
Q 014481 278 LGIAWFSGFKILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLS 357 (423)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 357 (423)
+.++..+...+++ |.++...+..++..........
T Consensus 162 ~~~~~~~~~~~~~---------------------------------------------~~~~~~~~~~~~~~~~~~~~~~ 196 (352)
T cd06174 162 LGLLLALLLLFLL---------------------------------------------RLLLLLALAFFLLSFGYYGLLT 196 (352)
T ss_pred HHHHHHHHHHHHH---------------------------------------------HHHHHHHHHHHHHHhHHHHHHH
Confidence 8777666555543 4567777788888888889999
Q ss_pred hhhHHHHHhhCCChhhHHHHHHHHHHHHHHHHHHHHHHhHHhhhcC
Q 014481 358 WLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATG 403 (423)
Q Consensus 358 ~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~r~ 403 (423)
+.|.+..+.+|.+..+.+.......++.+++.++.+++.||+++|+
T Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 242 (352)
T cd06174 197 YLPLYLQEVLGLSAAEAGLLLSLFGLGGILGALLGGLLSDRLGRRR 242 (352)
T ss_pred HHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 9999999877999999999999999999999999999999999885
No 62
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.93 E-value=2.3e-24 Score=206.24 Aligned_cols=264 Identities=14% Similarity=0.031 Sum_probs=207.2
Q ss_pred HHHHHHHHHhhhhhhhhhHHHhhhhhCCCcchhhHHHHHHHHHHHhhhhhhhhHhhHhcCchHHHHHHHHHHHHHHHHHH
Q 014481 119 TSLAFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPL 198 (423)
Q Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~ 198 (423)
+.+..++..+......+.+|.+.++++.++.+.|++.+.+.++..+++++.|+++||+|||+++.++.++.+++.+....
T Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~l~~~~~~~~~G~l~dr~g~~~~l~~~~~~~~~~~~~~~~ 101 (417)
T PRK10489 22 VFIARFISIFGLGLLGVAVPVQIQMMTGSTLQVGLSVTLTGGAMFIGLMVGGVLADRYDRKKLILLARGTCGLGFIGLAL 101 (417)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHhhHHHhhhcCCceEEEehHHHHHHHHHHHHH
Confidence 34445566667777788889988899999999999999999999999999999999999999999988777766554422
Q ss_pred ----hhhHHHHHHHHHHHHHhhcccchHhHHHHHHhcCCCCchhhHHHHHHhhhhhHHHHHHhhHHHhhhccCchHHHHH
Q 014481 199 ----LAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYI 274 (423)
Q Consensus 199 ----~~~~~~~~~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~~~~ 274 (423)
..++++.+++.|++.|++.+...+...+++.+++|+++|+++.++.....++|..+||.+++.+.+..||++.|++
T Consensus 102 ~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~g~l~~~~~~~~~~~~ 181 (417)
T PRK10489 102 NAFLPEPSLLAIYLLGLWDGFFGSLGVTALLAATPALVGRENLMQAGAITMLTVRLGSVISPALGGLLIAAGGVAWNYGL 181 (417)
T ss_pred HHHcCCCcHHHHHHHHHHHHHHHHHHHHHHhhhhhhccCHHHHHHHHHHHHHHHhHHHHhHHHHHHHHHHHHhhHHHHHH
Confidence 1456788889999999998888888899999999999999999999999999999999999999998899999998
Q ss_pred HHHHHHHHHHHHHhhccCCcCcCCCCCcchhhhhhhhhhhhhHHhhccccCCCcHHHhhhcHHHHHHHHHHHHHHHHHHH
Q 014481 275 FGLLGIAWFSGFKILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYT 354 (423)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 354 (423)
.++..++..+..+.+|+.+++...+ ++.. +. . ...++.++++|.++...+..++... ...
T Consensus 182 ~~~~~~~~~~~~~~l~~~~~~~~~~---~~~~----~~----~--------~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 241 (417)
T PRK10489 182 AAAGTFITLLPLLRLPALPPPPQPR---EHPL----RS----L--------LAGFRFLLASPVVGGIALLGGLLTM-ASA 241 (417)
T ss_pred HHHHHHHHHHHHHhCCCCCCCCccc---ccch----HH----H--------HHHHHHHHcChHHHHHHHHHHHHHH-HHh
Confidence 8877776666666666543321110 0000 00 0 0124567788887666555444333 356
Q ss_pred HHhhhhHHHHHhhCCChhhHHHHHHHHHHHHHHHHHHHHHHhHHhhhc
Q 014481 355 CLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIAT 402 (423)
Q Consensus 355 ~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~r 402 (423)
...++|.|+++.+|+++...+++.+...++.+++.++.+++.||.+++
T Consensus 242 ~~~~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~~~l~~~~~~~ 289 (417)
T PRK10489 242 VRVLYPALADEVWQMGAAQIGLLYAAVPLGAALGALTSGWLAHSARPG 289 (417)
T ss_pred HHHhhHHHHHhccCCChhHhHHHHHHHHHHHHHHHHHHHHhhhccCcc
Confidence 677899999987899999999999999999999999999999985443
No 63
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.93 E-value=1e-23 Score=199.24 Aligned_cols=262 Identities=11% Similarity=-0.034 Sum_probs=203.5
Q ss_pred HHHHHHHHHhhhhhhhhhHHHhhhhhCCCcchhhHHHHHHHHHHHhhhhhhhhHhhHhcCchHHHHHHH-HHHHHHHHHH
Q 014481 119 TSLAFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVL-IWSLATALLP 197 (423)
Q Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~-~~~~~~~~~~ 197 (423)
+.+.++..++......|++|.+.+++|.+..++|++.+++.+...++++++|+++||+||+........ ...+..+...
T Consensus 9 l~~~~~~~~~~~~~~~p~l~~~l~~~g~s~~~ig~~~s~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~l~~~~~~ 88 (382)
T TIGR00902 9 LALGFFGYFCAYGIFLPFFPAWLKGIGLGEEMIGLLIGAALIARFAGGLFFAPLIKDANHIIIALRLLALASAIFAAAFS 88 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHH
Confidence 556667777777889999999999999999999999999999999999999999999998543322211 1112222222
Q ss_pred HhhhHHHHHHHHHHHHHhhcccchHhHHHHHHhcCCCCchhhHHHHHHhhhhhHHHHHHhhHHHhhhccCchHHHHHHHH
Q 014481 198 LLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGL 277 (423)
Q Consensus 198 ~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~~~~~~~ 277 (423)
..+++++.+++.|+++|.+.+...|...++..++ .++|++++|....+.++|.++||++++.+.+.+|||..|++.++
T Consensus 89 ~~~~~~~~l~~~~~l~~~~~~~~~p~~~al~~~~--~~~~~~~~g~~~~~~slG~~~g~~l~g~l~~~~g~~~~f~~~~~ 166 (382)
T TIGR00902 89 AGAHNAWLLFIAIGLFALFFSAGMPIGDALANTW--QKQFGLDYGKVRLIGSAAFIIGSALFGGLIGMFDEQNILAILTA 166 (382)
T ss_pred HhhhhHHHHHHHHHHHHHHHccchhHHHHHHHHH--HHHcCCCccHHHHHHHHHHHHHHHHHHHHHHHcChhHHHHHHHH
Confidence 3567789999999999999888889888887664 37889999999999999999999999999999999999988765
Q ss_pred HHHHHHHHHHhhccCCcCcCCCCCcchhhhhhhhhhhhhHHhhccccCCCcHHHhhhcHHHHHHHHHHHHHHHHHHHHHh
Q 014481 278 LGIAWFSGFKILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLS 357 (423)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 357 (423)
..++.+ ..+.++++.++++++. +++ ..+...+++++|+|.+|.+.+..++...+......
T Consensus 167 ~~~~~~-~~~~~~~~~~~~~~~~-~~~------------------~~~~~~~~~~l~~~~~~~~l~~~~l~~~~~~~~~~ 226 (382)
T TIGR00902 167 GLAFML-IGFLIKPTIPPKDAIP-EDE------------------SQGDSAFIALLKNPMNLRFLAAVCLIQGAHAAYYG 226 (382)
T ss_pred HHHHHH-HHHHcCCCCCCCcccc-ccc------------------cccchhHHHHHcChHHHHHHHHHHHHHHHHHHHHH
Confidence 533333 3333333322111100 000 00111357889999999999988888888989999
Q ss_pred hhhHHHHHhhCCChhhHHHHHHHHHHHHHHHHHHHHHHhHHhhhcC
Q 014481 358 WLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATG 403 (423)
Q Consensus 358 ~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~r~ 403 (423)
+.|.|+++ .|.++.+.|.+..+..++.+++..+.+++.||++.|+
T Consensus 227 ~~~~~l~~-~g~s~~~~g~l~~~~~~~~i~~~~~~~~l~~r~g~~~ 271 (382)
T TIGR00902 227 FSAIYWQA-AGISASATGLLWGIGVLAEIIIFAFSNKLFQNCSARD 271 (382)
T ss_pred HHHHHHHH-CCCCHhHHHHHHHHHHHHHHHHHHHhHHHHhhCCHHH
Confidence 99999987 7999999999999999999999999999999999874
No 64
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.93 E-value=5e-23 Score=196.54 Aligned_cols=266 Identities=17% Similarity=0.145 Sum_probs=198.8
Q ss_pred HHHHHHHHHHHHHhhhhhhhhhHHHhhhhhCCCcch-----hhHHHHHHHHHHHhhhhhhhhHhhHhcCchHHHHHHHHH
Q 014481 115 LIGTTSLAFVICNMDKVNLSVAIIPMSHRFGWNSSV-----AGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIW 189 (423)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~-----~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~ 189 (423)
....++++.++..+......+.+|.+.+++|.+..+ .|++.+++.++..++.+++|+++||+|||++++.+.++.
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~ 94 (408)
T PRK09874 15 NLTVAWLGCFLTGAAFSLVMPFLPLYVEQLGVTGHSALNMWSGLVFSITFLFSAIASPFWGGLADRKGRKIMLLRSALGM 94 (408)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhHHHHHHHhCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhCcHHHHHHHHHHH
Confidence 344556677777788888889999999999988655 488999999999999999999999999999999998888
Q ss_pred HHHHHHHHHhhhHHHHHHHHHHHHHhhcccchHhHHHHHHhcCCCCchhhHHHHHHhhhhhHHHHHHhhHHHhhhccCch
Q 014481 190 SLATALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWE 269 (423)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~ 269 (423)
+++.+++ ...++++.+++.|++.|++.+ ..+....++.+++|+++|++++++......+|..++|.+++.+.+..+|+
T Consensus 95 ~~~~~~~-~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~ 172 (408)
T PRK09874 95 GIVMVLM-GLAQNIWQFLILRALLGLLGG-FVPNANALIATQVPRNKSGWALGTLSTGGVSGALLGPLAGGLLADSYGLR 172 (408)
T ss_pred HHHHHHH-HHHhhHHHHHHHHHHHHHhhh-hHHhHHHHHHHhcCHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHH
Confidence 8887666 456778899999999999855 56777889999999999999999999999999999999999999989999
Q ss_pred HHHHHHHHHHHHHHHHHH-hhccCCcCcCCCCCcchhhhhhhhhhhhhHHhhccccCCCcHHHhhhcHHHHHH-HHHHHH
Q 014481 270 SVFYIFGLLGIAWFSGFK-ILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAM-IYAHFC 347 (423)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~~ 347 (423)
+.|++.+++.++..+..+ ++++++++.+++ +. .. .. ...+.++++.++.. .+..+.
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~--~~--------~~---------~~~~~~~~~~~~~~~~~~~~~ 230 (408)
T PRK09874 173 PVFFITASVLFLCFLVTLFCIRENFQPVSKK---EM--LH--------MR---------EVVTSLKNPKLVLSLFVTTLI 230 (408)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccCcccccch---hh--hH--------HH---------HHHHhCcCCchHHHHHHHHHH
Confidence 999998888766554443 444432211110 00 00 00 01234566665543 333334
Q ss_pred HHHHHHHHHhhhhHHHHHhhCCChh---hHHHHHHHHHHHHHHHHHHHHHHhHHhhhcCC
Q 014481 348 GSWGHYTCLSWLPTYFSEELSLNLT---EAAWVSILPPLASVLVTSIAAQFADNLIATGV 404 (423)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~~g~s~~---~~~~~~~~~~~~~~~~~~~~g~l~dr~~~r~~ 404 (423)
..........+++.|..+..+.... ..+.+..+.+++.+++.++.|++.||+++|+.
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~g~l~dr~g~~~~ 290 (408)
T PRK09874 231 IQVATGSIAPILTLYVRELAGNVSNIAFISGMIASVPGVAALLSAPRLGKLGDRIGPEKI 290 (408)
T ss_pred HHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchh
Confidence 4445555667788888765332221 24556667778888999999999999998754
No 65
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.93 E-value=2.8e-23 Score=201.70 Aligned_cols=268 Identities=15% Similarity=0.166 Sum_probs=205.3
Q ss_pred HHHHHHHHHHHHhhhhhhhhhHHHhhhhhCCCcchhhHHHHHHHHHHHhhhhhhhhHhhHh-----cCchH-HHHHHHHH
Q 014481 116 IGTTSLAFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIF-----GGRKV-LQTGVLIW 189 (423)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-----G~r~~-~~~~~~~~ 189 (423)
...+++..+..+.........+|...++.|.+..++|.+ +.....+ ++.+++|+++||+ |||+. ++++.++.
T Consensus 14 ~~~~~~l~~~~gl~~~~~~~~l~~~l~~~g~~~~~ig~~-~~~~~~~-~~~~l~gpl~Dr~~~~~~Grrr~~ll~~~i~~ 91 (491)
T PRK11010 14 SAILLILGFASGLPLALTSGTLQAWMTVENIDLKTIGFF-SLVGQAY-VFKFLWSPLMDRYTPPFLGRRRGWLLATQLLL 91 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHH-HHHHHHH-HHHHHHHHHHHcccccCCCCchHHHHHHHHHH
Confidence 334555566677777788888999999999999999987 4444444 5889999999999 99986 55666666
Q ss_pred HHHHHHHHHhh--hHHHHHHHHHHHHHhhcccchHhHHHHHHhcCCCCchhhHHHHHHhhhhhHHHHHHhhHHHhhh-cc
Q 014481 190 SLATALLPLLA--GFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIE-NL 266 (423)
Q Consensus 190 ~~~~~~~~~~~--~~~~~~~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~-~~ 266 (423)
+++...+++.. ++++.+.+.+++.|++.+...+...+++.|++|+++|+++.++...+..+|.++++.+++++.+ ..
T Consensus 92 ~~~~~~~a~~~~~~~l~~l~~~~~l~~~~~a~~~i~~~a~~~~~~~~~~rg~~~~i~~~g~~lG~llg~~l~~~l~~~~~ 171 (491)
T PRK11010 92 LVAIAAMGFLEPGTQLRWLAALAVVIAFCSASQDIVFDAWKTDVLPAEERGAGAAISVLGYRLAMLVSGGLALWLADRYL 171 (491)
T ss_pred HHHHHHHHHcCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 66655554432 4667888899999999999999999999999999999999999999999999999999999998 57
Q ss_pred CchHHHHHHHHHHHHHHHHHHhhccCCcCcCCCCCcchhhhhhhhhhhhhHHhhccccCCCcHHHhhhcHHHHHHHHHHH
Q 014481 267 GWESVFYIFGLLGIAWFSGFKILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHF 346 (423)
Q Consensus 267 gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 346 (423)
|||..|++.+++.++..+..++.+|+++.... ++ .. .+. ...+++++++++..|...+..+
T Consensus 172 GWr~~f~i~a~l~ll~~l~~~~~~e~~~~~~~---~~-~~---~~~------------~~~~l~~~~~~~~~~~~ll~~~ 232 (491)
T PRK11010 172 GWQGMYWLMAALLIPCIIATLLAPEPTDTIPV---PK-TL---EQA------------VVAPLRDFFGRNNAWLILLLIV 232 (491)
T ss_pred CHHHHHHHHHHHHHHHHHHHHhcCCCcccccc---cc-ch---hhh------------HHHHHHHHHcCcCHHHHHHHHH
Confidence 99999999998877766655556554321100 00 00 000 0013567777777777666666
Q ss_pred HHHHHHHHHHhhhhHHHHHhhCCChhhHHHHHH-HHHHHHHHHHHHHHHHhHHhhhcCC
Q 014481 347 CGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSI-LPPLASVLVTSIAAQFADNLIATGV 404 (423)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~-~~~~~~~~~~~~~g~l~dr~~~r~~ 404 (423)
+..........+.+.|+.+.+|++..+.+.+.. ...++.+++.+++|++.||+++|+.
T Consensus 233 l~~~~~~~~~~~~~~~l~~~~G~s~~~~g~~~~~~g~i~~iiG~ll~G~L~dr~g~~~~ 291 (491)
T PRK11010 233 LYKLGDAFAMSLTTTFLIRGVGFDAGEVGLVNKTLGLLATIVGALYGGILMQRLSLFRA 291 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHH
Confidence 666666777778888887778999999999874 5568999999999999999998753
No 66
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.92 E-value=3.7e-23 Score=195.48 Aligned_cols=256 Identities=14% Similarity=0.059 Sum_probs=197.6
Q ss_pred HHHHHhhhhhhhhhHHHhhhhhCCCcchhhHHHHHHHHHHHhhhhhhhhHhhHhcCc----hHHHHHHHHHHHHHHHHHH
Q 014481 123 FVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGR----KVLQTGVLIWSLATALLPL 198 (423)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r----~~~~~~~~~~~~~~~~~~~ 198 (423)
++..........+.+|.+.+++|.|..++|++.+++.++..++++++|+++||+||| +.+.++..+. .+....
T Consensus 13 ~~~~~~~~g~~~p~l~~~l~~~g~s~~~iG~~~~~~~l~~~l~~~~~g~l~dr~g~~~~~~~~~~~~~~~~---~~~~~~ 89 (382)
T PRK11128 13 YFGYFFAYGVFLPFWSVWLKGQGYTPETIGLLLGAGLVARFLGSLLIAPRVKDPSQLIPALRLLALLTLLF---AVAFWF 89 (382)
T ss_pred HHHHHHHHHHHhhhHHHHHHhcCCCHHHHHHHHHHHHHHHHhhhHHHHHHHhhhcchHHHHHHHHHHHHHH---HHHHHH
Confidence 445556678888999999999999999999999999999999999999999999994 3333222221 122223
Q ss_pred hhhHHHHHHHHHHHHHhhcccchHhHHHHHHhcCCCCchhhHHHHHHhhhhhHHHHHHhhHHHhhhccCchHHHHHHHHH
Q 014481 199 LAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLL 278 (423)
Q Consensus 199 ~~~~~~~~~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~~~~~~~~ 278 (423)
..++++.+++.|++.|++.+...+...+++.++ .++|+++++......++|..+||++++++.+++|||..|++.++.
T Consensus 90 ~~~~~~~l~i~~~l~g~~~~~~~~~~~a~~~~~--~~~~~~a~~~~~~~~~lg~~igp~lgg~l~~~~g~~~~f~~~~~~ 167 (382)
T PRK11128 90 GAHSFWLLFVAIGLFNLFFSPLVPLTDALANTW--QKQIGLDYGKVRLWGSIAFVIGSALTGKLVSWFGEQAILWILTAG 167 (382)
T ss_pred hcccHHHHHHHHHHHHHHHcccccHHHHHHHHH--HhhccCCcchHHHHHHHHHHHHHHHHHHHHHHcChhHHHHHHHHH
Confidence 457788888999999999888888888888876 357888899999999999999999999999999999999987765
Q ss_pred HHHHHHHHHhhccCCcCcCCCCCcchhhhhhhhhhhhhHHhhccccCCCcHHHhhhcHHHHHHHHHHHHHHHHHHHHHhh
Q 014481 279 GIAWFSGFKILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLSW 358 (423)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 358 (423)
.++..+..++.++++++. ++ ++. ......++++++|+|.+|...+..++..........+
T Consensus 168 ~~~~~~~~~~~~~~~~~~-~~---~~~----------------~~~~~~~~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~ 227 (382)
T PRK11128 168 VASMLLGQLLRPTIMPQG-ES---RQQ----------------ESAGWPAWKALLKEPTVWRFLLCVSLLQGSHAAYYGF 227 (382)
T ss_pred HHHHHHHHHccCCCCCcc-cc---ccc----------------cccccchHHHHHcChhHHHHHHHHHHHHHHhHhHHHH
Confidence 554443333333321111 00 000 0001124688999999998888888777777778888
Q ss_pred hhHHHHHhhCCChhhHHHHHHHHHHHHHHHHHHHHHHhHHhhhcCC
Q 014481 359 LPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGV 404 (423)
Q Consensus 359 ~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~r~~ 404 (423)
.|.|+++ .|++..+.+.+.+...++.++..++.+++.||+++|+.
T Consensus 228 ~~~~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~ 272 (382)
T PRK11128 228 SAIYWQA-AGYSASTIGYLWSLGVVAEVLIFAFSNRLFRRWSARDL 272 (382)
T ss_pred HHHHHHH-CCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
Confidence 8999976 79999999999998889999999999999999998854
No 67
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=99.92 E-value=7.8e-23 Score=194.09 Aligned_cols=253 Identities=17% Similarity=0.167 Sum_probs=193.8
Q ss_pred HHHHHHHHHhhhhhhhhhHHH-hhhhhCCCcchhhHHHHHHHHHHHhhhhhhhhHhhHhcCchHHHHHHHHHHHHHHHHH
Q 014481 119 TSLAFVICNMDKVNLSVAIIP-MSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLP 197 (423)
Q Consensus 119 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~ 197 (423)
+....++.........++++. +.+++|++..++|++.+...++..+.+++.|+++||+|||++++++.++.+++.+++
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~gl~~~~~~l~~~~~~~~~G~l~dr~g~k~~l~~~~~~~~~~~~~~- 93 (400)
T PRK11646 15 LLIDNMLVVLGFFVVFPLISIRFVDQLGWAAVMVGIALGLRQFIQQGLGIFGGAIADRFGAKPMIVTGMLMRAAGFATM- 93 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHhhhhHHHHHhCchHHHHHHHHHHHHHHHHH-
Confidence 334455555555666666655 678899999999999999999999999999999999999999999999999988777
Q ss_pred HhhhHHHHHHHHHHHHHhhcccchHhHHHHHHhcCCCCchhhHHHHHHhhhhhHHHHHHhhHHHhhhccCchHHHHHHHH
Q 014481 198 LLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGL 277 (423)
Q Consensus 198 ~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~~~~~~~ 277 (423)
...++++.+++.|++.|++.+...+...+++.+++|+++|++++|+.....++|..+||++++.+. ..||++.|++.++
T Consensus 94 ~~~~~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~g~l~-~~g~~~~f~~~~~ 172 (400)
T PRK11646 94 AIAHEPWLLWLSCILSGLGGTLFDPPRTALVIKLIRPHQRGRFFSLLMMQDSAGAVIGALLGSWLL-QYDFRLVCATGAV 172 (400)
T ss_pred HHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhhHHHHHHHHHH
Confidence 456778889999999999998888999999999999999999999999999999999999999998 6799999999887
Q ss_pred HHHHHHHH-HHhhccCCcCcCCCCCcchhhhhhhhhhhhhHHhhccccCCCcHHHhhhcHHHHHHHHHHHHHHHHHHHHH
Q 014481 278 LGIAWFSG-FKILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCL 356 (423)
Q Consensus 278 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 356 (423)
..++..+. .++.++.++. . .++ . ....+++++++|.++...+..+..........
T Consensus 173 ~~~~~~i~~~~~~~~~~~~--~---~~~-------~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (400)
T PRK11646 173 LFVLAAAFNAWLLPAYKLS--T---VRT-------P------------VREGMTRVLRDKRFVTYVLTLTGYYMLAVQVM 228 (400)
T ss_pred HHHHHHHHHHHhCCccccc--c---cch-------h------------hHHHHHHHHcCchHHHHHHHHHHHHHHHHHHH
Confidence 76665433 3333332110 0 000 0 00125677888888776665555444444456
Q ss_pred hhhhHHHHHhhCCChhhHHHHHHHHHHHHHHHHHHHHHHhHH
Q 014481 357 SWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADN 398 (423)
Q Consensus 357 ~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr 398 (423)
.++|.|+++. +.++.+.+.+.++..++.+++....+++.||
T Consensus 229 ~~~p~~~~~~-~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~ 269 (400)
T PRK11646 229 LMLPIMVNDI-AGSPSAVKWMYAIEACLSLTLLYPIARWSEK 269 (400)
T ss_pred HhhhhhHHhh-cCCchHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7889999875 4467788888888777776666555666654
No 68
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.92 E-value=1.9e-23 Score=198.23 Aligned_cols=260 Identities=19% Similarity=0.205 Sum_probs=196.6
Q ss_pred HHHHhhhhhhhhhHHHhhhhhC--CCcchhhHHHHH-----HHHHHHhhhhhhhhHhhHhcCchHHHHHHHHHHHHHHHH
Q 014481 124 VICNMDKVNLSVAIIPMSHRFG--WNSSVAGLVQSS-----FFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALL 196 (423)
Q Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~--~s~~~~~~~~~~-----~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~ 196 (423)
+.++++...++...+.+.+++. .++.+.+.+.+. ..++..+++++.|+++||+|||++++++.++.+++.+++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~ 82 (394)
T TIGR00883 3 AVEWFDFYLYGFAAVLVFHTFFPPSGDPLVALLATFATFAAGFLARPLGAIVFGHFGDRIGRKKTLVITLLMMGIGTLLI 82 (394)
T ss_pred chhHHHHHHHHHHHHHHHHHhcCCCCChHHHHHHHHHHHHHHHHHhhhHHHHhhhhhhhhhhHHHHHHHHHHHHHHHHHH
Confidence 3556777777777777666643 445556655543 333445688999999999999999999999998888777
Q ss_pred HHhhhHHH--------HHHHHHHHHHhhcccchHhHHHHHHhcCCCCchhhHHHHHHhhhhhHHHHHHhhHHHhh-----
Q 014481 197 PLLAGFMP--------GLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPII----- 263 (423)
Q Consensus 197 ~~~~~~~~--------~~~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~----- 263 (423)
. ..++++ .++++|+++|++.+...+....++.|++++++|+++.++...+..+|.++++.++..+.
T Consensus 83 ~-~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~G~~i~~~~~~~~~~~~~~ 161 (394)
T TIGR00883 83 G-LLPSYATIGIWAPILLLLARLIQGFSLGGEWGGAALYLAEYAPPGKRGFYGSFQQVGAPVGLLLAALTVLLLSYLLGD 161 (394)
T ss_pred h-hCCChhhhHHHHHHHHHHHHHHHHhhccccccccHHHhhhcCCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcCH
Confidence 4 444433 57889999999999999999999999999999999999999999999999998877654
Q ss_pred ---hccCchHHHHHHHHHHHHHHHHHHhhccCCcCcCCCCCcchhhhhhhhhhhhhHHhhccccCCCcHHHhhhcHH--H
Q 014481 264 ---ENLGWESVFYIFGLLGIAWFSGFKILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKA--V 338 (423)
Q Consensus 264 ---~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~ 338 (423)
+..+||+.|++.+++.++..+.....+|+++.+..+. +++....++++.++++. +
T Consensus 162 ~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------~~~~~~~~~~~~~~~~~~~~ 221 (394)
T TIGR00883 162 DALLEWGWRIPFLVSAVLVLIGLYLRRNLEETPVFEKAQE--------------------KHKKKRGPIRETLTKHRKPF 221 (394)
T ss_pred HHhhccchHHHHHHHHHHHHHHHHHHHhcCCChhHHHHHh--------------------ccccccCCHHHHHHhchHHH
Confidence 3568999998877766555444444444332111000 00111223556666655 6
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhHHHHHhhCCChhhHHHHHHHHHHHHHHHHHHHHHHhHHhhhcCC
Q 014481 339 WAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGV 404 (423)
Q Consensus 339 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~r~~ 404 (423)
+...+..++.....+....++|.|+++.+|.++.+.+.+.....++.+++.++.|++.||+++|+.
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~ 287 (394)
T TIGR00883 222 LLGLGLVIATTTTFYLITTYLPTYLTQTLGLSANSALLVLMLSLILFFITIPLSGALSDRIGRRPV 287 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHH
Confidence 666777777777778888999999988889999999999999999999999999999999998853
No 69
>PRK10054 putative transporter; Provisional
Probab=99.92 E-value=1.6e-23 Score=198.53 Aligned_cols=264 Identities=11% Similarity=0.067 Sum_probs=203.5
Q ss_pred HHHHHHHHHHHHhhhhhhhhhHHH-hhhhhCCCcchhhHHHHHHHHHHHhhhhhhhhHhhHhcCchHHHHHHHHHHHHHH
Q 014481 116 IGTTSLAFVICNMDKVNLSVAIIP-MSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATA 194 (423)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~ 194 (423)
+..+.+..++.........+.++. +.+++|++..++|++.+++.++..+++++.|+++||+|||++++++.++.+++.+
T Consensus 9 ~~~l~~~~~~~~~g~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~k~~~~~~~~~~~~~~~ 88 (395)
T PRK10054 9 TSALLASSLLLTIGRGATLPFMTIYLSRQYSLSVDLIGYAMTIALTIGVVFSLGFGILADKFDKKRYMLLAITAFASGFI 88 (395)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHH
Confidence 334555666667777777777665 6678999999999999999999999999999999999999999999988888776
Q ss_pred HHHHhhhHHHHHHHHHHHHHhhcccchHhHHHHHHhcCCCCchhhHHHHHHhhhhhHHHHHHhhHHHhhhccCchHHHHH
Q 014481 195 LLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYI 274 (423)
Q Consensus 195 ~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~~~~ 274 (423)
++ .+.++++.+++++++.|.+.+...+...++..|.+|+++|++++++.+...++|..+||++++.+.+ .+|+..|++
T Consensus 89 ~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~lg~~igp~l~~~l~~-~g~~~~f~~ 166 (395)
T PRK10054 89 AI-PLVNNVTLVVLFFALINCAYSVFSTVLKAWFADNLSSTSKTKIFSLNYTMLNIGWTVGPPLGTLLVM-QSINLPFWL 166 (395)
T ss_pred HH-HHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hccCcHHHH
Confidence 66 4567778888888888888777788889999999999999999999999999999999999999875 699999998
Q ss_pred HHHHHHHHHHHH-HhhccCCcCcCCCCCcchhhhhhhhhhhhhHHhhccccCCCcHHHhhhcHHHHHHHHHHHHHHHHHH
Q 014481 275 FGLLGIAWFSGF-KILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHY 353 (423)
Q Consensus 275 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 353 (423)
.+++.++.++.. +++++++++++.+ ++ + ....++.+++|.++...+..++..+...
T Consensus 167 ~~~~~~i~~i~~~~~~~~~~~~~~~~---~~------~--------------~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 223 (395)
T PRK10054 167 AAICSAFPLVFIQIWVQRSEKAIATE---TG------S--------------VWSPSVLLQDKALLWFTCSGFLASFVSG 223 (395)
T ss_pred HHHHHHHHHHHHHHHHhccccccccc---hh------h--------------hhhhhhhccCceehHHHHHHHHHHHHHH
Confidence 888776654433 3455443221100 00 0 0012567889999888877777777666
Q ss_pred HHHhhhhHHHHHh--hCCChhhHHHHHHHHHHHHHHHHHHHHHHhHHhhhcCC
Q 014481 354 TCLSWLPTYFSEE--LSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGV 404 (423)
Q Consensus 354 ~~~~~~~~~~~~~--~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~r~~ 404 (423)
....+.+.|.... .+.+....+.+.....+..+......|++.||.++|+.
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 276 (395)
T PRK10054 224 AFASCISQYVMVVADSDFAEKVVAVVLPVNAAMVVSLQYSVGRRLNAANIRPL 276 (395)
T ss_pred HhhhhHHHHHHHhcccchHHHHHHHHHHhhhhheeeehhHHHHHHccCCchhH
Confidence 6666777776533 35556666777777777777777888999999887743
No 70
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=99.92 E-value=1.8e-23 Score=200.58 Aligned_cols=288 Identities=18% Similarity=0.219 Sum_probs=227.3
Q ss_pred hHHHHHHHHHHHHHHHhhhhhhhhhHHHhhhhhCCCcchhhHHHHHHHHHHHhhhhhhhhHhhHhcCchHHHHHHHHHHH
Q 014481 112 RYKLIGTTSLAFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSL 191 (423)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~ 191 (423)
-|.+.+..++..+........++.+.+.++++++.+..+++|+.++......+..|+.+.+.||+|.|.+.++|.++.++
T Consensus 44 gWvV~~a~fl~~~~~~g~~~~~Gv~~~~~~~~f~~s~~~~~~i~sl~~~~~~~~gpl~s~l~~rfg~R~v~i~G~~v~~~ 123 (509)
T KOG2504|consen 44 GWVVVFASFLVNLSTDGLINSFGLLFEELMDYFGSSSSQIAWIGSLLLGVYLLAGPLVSALCNRFGCRTVMIAGGLVAAL 123 (509)
T ss_pred eeeeeHhHHHHHHhhhcchheehhhHHHHHHHhCCCccHHHHHHHHHHHHHHHhccHHHHHHhhcCchHHHHHHHHHHHH
Confidence 45666677777777777777777889999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhhHHHH-HHHHHHHHHhhcccchHhHHHHHHhcCCCCchhhHHHHHHhhhhhHHHHHHhhHHHhhhccCchH
Q 014481 192 ATALLPLLAGFMPG-LVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWES 270 (423)
Q Consensus 192 ~~~~~~~~~~~~~~-~~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~ 270 (423)
+.++.. ++++.|. ++..-++.|+|.+..+.....++..+|. ++|+.+.|+...+.++|.++-|.+...+.+.+|||+
T Consensus 124 g~~lss-F~~~i~~l~lt~gvi~G~G~~~~~~paiviv~~YF~-kkR~lA~Gia~~GsG~G~~~~~~l~~~l~~~~G~r~ 201 (509)
T KOG2504|consen 124 GLLLSS-FATSLWQLYLTFGVIGGLGLGLIYLPAVVILGTYFE-KKRALATGIAVSGTGVGTVVFPPLLKYLLSKYGWRG 201 (509)
T ss_pred HHHHHH-HHhhHHHHHHHHHHHhhccchhhhcchhhhhhhHhH-HHHHHHHhhhhccCCcceeeHHHHHHHHHHHhCcHH
Confidence 988775 5555554 4556799999999999999999998887 899999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhccCCcCcCCC--------------------CCcchhhhhhhh---hhhhhHHhhcc-----
Q 014481 271 VFYIFGLLGIAWFSGFKILQEGETSNGAT--------------------LAPRSNYINMKK---SLSASLEEMGE----- 322 (423)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------~~~~~~~~~~~~---~~~~~~~~~~~----- 322 (423)
.+++.+.+.+-.++....+++........ ....++.....+ .......+.++
T Consensus 202 ~~l~~~~~~l~~~~~~~~~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (509)
T KOG2504|consen 202 ALLIFGGISLNVLVAGALLRPLSPPKKPNEEKDLRNSAASVESTPKPVELRISERDSGLKKLSLSNLATLKRGPDKWRNS 281 (509)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCCcCCCchhhhhhccccccccccccccccccccCCCCCCcccccchhhhhhCCcccccc
Confidence 99999998876666655555422221000 000000000000 00000000000
Q ss_pred ccCCCcH---HHhhhcHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHhhCCChhhHHHHHHHHHHHHHHHHHHHHHHhHHh
Q 014481 323 SLKDVPW---KAIFRSKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNL 399 (423)
Q Consensus 323 ~~~~~~~---~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~ 399 (423)
..+.... .++++++.++.+.+...+...++.....++|.|..+ +|++..+++.+.++.++..++++++.|++.|+.
T Consensus 282 ~~~~~~~~~d~~ll~~~~fl~~~~~~~~~~~g~~~p~~~l~~~~~~-~g~~~~~aa~l~Siigi~~i~gRi~~G~laD~~ 360 (509)
T KOG2504|consen 282 PLQAFLSMLDLSLLKDPKFLLLALSNLFAYLGFNVPFVYLPSYAKS-LGLSSNDAAFLLSIIGVSDIIGRIILGLLADKP 360 (509)
T ss_pred chhhhhhhhhHHHHcCchHHHHHHHHHHHHHHHHHHHHHHHHHHhh-cCCChhhhHHHHHHHHHhhhhhhhhhhhhcCcc
Confidence 1111111 588999999999999999999999999999999985 799999999999999999999999999999998
Q ss_pred hhc
Q 014481 400 IAT 402 (423)
Q Consensus 400 ~~r 402 (423)
..+
T Consensus 361 ~~~ 363 (509)
T KOG2504|consen 361 GIR 363 (509)
T ss_pred ccc
Confidence 744
No 71
>TIGR00898 2A0119 cation transport protein.
Probab=99.92 E-value=1.7e-23 Score=205.39 Aligned_cols=262 Identities=19% Similarity=0.153 Sum_probs=195.1
Q ss_pred hhHHHhhhhhCCC---cchhhHHHHHHHHHHHhhhhhhhhHhhHhcCchHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHH
Q 014481 135 VAIIPMSHRFGWN---SSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPLLAGFMPGLVLSRV 211 (423)
Q Consensus 135 ~~~~~~~~~~~~s---~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 211 (423)
+..+.+.+++|++ ..+.+++.+++.++..++++++|+++||+|||++++++.++.+++.++. .++++++.++++|+
T Consensus 110 ~~~~~i~~e~~l~c~~~~~~~~~~s~~~~g~~~g~~~~g~l~Dr~Grr~~~~~~~~~~~i~~~~~-~~~~~~~~~~~~r~ 188 (505)
T TIGR00898 110 TFSSTIVTEWDLVCEDAWKVDLTQSCFFVGVLLGSFVFGYLSDRFGRKKVLLLSTLVTAVSGVLT-AFSPNYTVFLVFRL 188 (505)
T ss_pred cccccEEEEecceechHHHHHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHH-HHcccHHHHHHHHH
Confidence 4567789999998 8999999999999999999999999999999999999999988888776 56778899999999
Q ss_pred HHHhhcccchHhHHHHHHhcCCCCchhhHHHHHHhhhhhHHHHHHhhHHHhhhccCchHHHHHHHHHHHHHHHHHHhhcc
Q 014481 212 LVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAWFSGFKILQE 291 (423)
Q Consensus 212 l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~~~~~~~~~~~~~~~~~~~~~ 291 (423)
+.|++.+...+...+++.|++|+++|+++.++...+..+|.++++.++..+.+ ||+.+++.+++.++..+..+++||
T Consensus 189 l~G~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~---wr~~~~~~~i~~~~~~~~~~~~~e 265 (505)
T TIGR00898 189 LVGMGIGGIWVQAVVLNTEFLPKKQRAIVGTLIQVFFSLGLVLLPLVAYFIPD---WRWLQLAVSLPTFLFFLLSWFVPE 265 (505)
T ss_pred HHHhhccchHHHHHHHhheecChhhhHHHHHHHHHHHHHHHHHHHHHHHHhhH---HHHHHHHHHHHHHHHHHHHHhcCC
Confidence 99999999999999999999999999999999999999999999999877653 999999999888877777777888
Q ss_pred CCcCcCCCCCcchhhhhhhh-----------hh-hhh-HHhhccccCCCcHHHhhhcHHHHHHHHHHHHHHHHHHHHHhh
Q 014481 292 GETSNGATLAPRSNYINMKK-----------SL-SAS-LEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLSW 358 (423)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~-----------~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 358 (423)
+++....+.+.++.....++ .. ... .++..+..+...+++++++|.++...+..++..+......+.
T Consensus 266 sp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 345 (505)
T TIGR00898 266 SPRWLISQGRIEEALKILQRIAKINGKKLPAEVLSLSLEKDLSSSKKQYSFLDLFRTPNLRKTTLCLMMLWFTTAFSYYG 345 (505)
T ss_pred ChHHHHHCCCHHHHHHHHHHHHHHcCCCCCHHHHhhhhhhhhhhccCCCcHHHHhCChHHHHHHHHHHHHHHHHHHHHHH
Confidence 76532222111111100000 00 000 000111112346789999999887766665554444333333
Q ss_pred hhHHHHHhhCCChhhHHHHHHHHHHHHHHHHHHHHHHhHHhhhcCC
Q 014481 359 LPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGV 404 (423)
Q Consensus 359 ~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~r~~ 404 (423)
++.+.. .++.+.. ......++..+++.++.+++.||+|||+.
T Consensus 346 ~~~~~~-~~~~~~~---~~~~~~~~~~i~~~~~~~~l~dr~grr~~ 387 (505)
T TIGR00898 346 LVLDLG-NLGGNIY---LDLFISGLVELPAKLITLLLIDRLGRRYT 387 (505)
T ss_pred Hhcccc-ccCCChH---HHHHHHHHHHHHHHHHHHHHHHHhCCHHH
Confidence 444443 3455432 33445677888899999999999998854
No 72
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.92 E-value=2.2e-22 Score=190.91 Aligned_cols=260 Identities=14% Similarity=0.042 Sum_probs=179.1
Q ss_pred HHHHHHHHHHhhhhhhhhhHHH-hhhhhCCCcchhhHHHHHHHH-HHHhhhhhhhhHhhHhcCchHHH-HHHHHHHHHHH
Q 014481 118 TTSLAFVICNMDKVNLSVAIIP-MSHRFGWNSSVAGLVQSSFFW-GYALSQLPGGWLAKIFGGRKVLQ-TGVLIWSLATA 194 (423)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~s~~~~~~~~~~~~~-~~~~~~~~~g~l~dr~G~r~~~~-~~~~~~~~~~~ 194 (423)
.+.+..++..+......+.++. +.+++|.+.+++|++.+...+ +..++.+++++ +||+|+|+.++ .+.++.+++..
T Consensus 19 ~~~~~~~~~~~~~~~~~p~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~~~~-~dr~g~r~~~~~~~~~~~~~~~~ 97 (393)
T PRK15011 19 AFLIVAFLTGIAGALQTPTLSIFLTDEVHARPAMVGFFFTGSAVIGILVSQFLAGR-SDKRGDRKSLIVFCCLLGVLACT 97 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHH-HhcccchhHHHHHHHHHHHHHHH
Confidence 3444566666777777777776 678899999999999876655 55555555555 99999998755 44555455555
Q ss_pred HHHHhhhHHHHHHHHHHHHHhhcccchHhHHHHHHhcCCCCch--hhHHHHHHhhhhhHHHHHHhhHHHhhhccCchHHH
Q 014481 195 LLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEER--SRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVF 272 (423)
Q Consensus 195 ~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r--~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~~ 272 (423)
+. ..+++++.+++.+.+.|...+...+...+++.++.++++| +...++.+.+.++|.++||++++.+.++.|||+.|
T Consensus 98 ~~-~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~g~~i~~~l~~~~gw~~~f 176 (393)
T PRK15011 98 LF-AWNRNYFVLLFVGVFLSSFGSTANPQMFALAREHADKTGREAVMFSSFLRAQVSLAWVIGPPLAYALAMGFSFTVMY 176 (393)
T ss_pred HH-HHhhHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHHHHhhHHHHHHHHhcChHHHH
Confidence 55 4566667766555555444456778888888888776555 34457888999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHH-HhhccCCcCcCCCCCcchhhhhhhhhhhhhHHhhccccCCCcHHHhhhcHHHHHHHHHHHHHHHH
Q 014481 273 YIFGLLGIAWFSGF-KILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWG 351 (423)
Q Consensus 273 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 351 (423)
++.++..++..+.. +++|+.++.++.. +.+ .+ . .++ +.+..+...+..++....
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~-----~~-------~---------~~~--~~~~~~~~~~~~~~~~~~ 231 (393)
T PRK15011 177 LSAAVAFIVCGVMVWLFLPSMRKELPLA--TGT-----LE-------A---------PRR--NRRDTLLLFVICTLMWGT 231 (393)
T ss_pred HHHHHHHHHHHHHHHhhcCccCCCCccc--ccc-----cc-------c---------ccc--ccccHHHHHHHHHHHHHH
Confidence 99888776665443 3455543221110 000 00 0 000 011223333333444445
Q ss_pred HHHHHhhhhHHHHHhhCCChhhHHHHHHHHHHHHHHHHHHHHHHhHHhhhcCC
Q 014481 352 HYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGV 404 (423)
Q Consensus 352 ~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~r~~ 404 (423)
...+..+.|.|+++.+|+++.+++.+.....++.+++.++.|+++||+++|+.
T Consensus 232 ~~~~~~~~p~~l~~~~~~~~~~~g~~~~~~~~~~i~~~~~~G~l~dr~g~~~~ 284 (393)
T PRK15011 232 NSLYIINMPLFIINELHLPEKLAGVMMGTAAGLEIPTMLIAGYFAKRLGKRFL 284 (393)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHH
Confidence 55666789999988889999999988888788888999999999999998853
No 73
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=99.92 E-value=1.5e-22 Score=192.59 Aligned_cols=265 Identities=15% Similarity=0.069 Sum_probs=202.8
Q ss_pred HHHHHHHHHhhhhhhhhhHHHhhhhhCCCcchhhHHHHHHHHHHHhhhhhhhhHhhHh-----cCch-HHHHHHHHHHHH
Q 014481 119 TSLAFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIF-----GGRK-VLQTGVLIWSLA 192 (423)
Q Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-----G~r~-~~~~~~~~~~~~ 192 (423)
+...++.++.........+|.+.++.|++.+++|++..+... .+..+++|+++||+ |||| +++++.++.+++
T Consensus 4 ~~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~ig~~~~~~~~--~~~~~l~g~~~Dr~~~~~~g~rr~~l~~~~~~~~l~ 81 (402)
T PRK11902 4 MLLLGFASGLPLALTSGTLQAWMTVEGLDIQTIGFFSLVGQA--YIFKFLWAPLMDRYTPPLLGRRRGWLLLTQVGLAAS 81 (402)
T ss_pred HHHHHHHHhhhHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHH--HHHHHHHHHHHHcccccCCCcchhHHHHHHHHHHHH
Confidence 455667778888888899999999999999999999776665 58899999999999 8876 677777777666
Q ss_pred HHHHHHhh--hHHHHHHHHHHHHHhhcccchHhHHHHHHhcCCCCchhhHHHHHHhhhhhHHHHHHhhHHHhhhc-cCch
Q 014481 193 TALLPLLA--GFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIEN-LGWE 269 (423)
Q Consensus 193 ~~~~~~~~--~~~~~~~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~-~gw~ 269 (423)
..++.... .+++.+++..++.+++.+...++..+++.|++|+++|+++.++...+..+|.++++.+++.+.+. .|||
T Consensus 82 ~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~al~~~~~~~~~r~~~~~~~~~g~~~g~i~g~~l~~~l~~~~~gw~ 161 (402)
T PRK11902 82 IAAMAFCPPHAALWPLAGLAVLVAFLSASQDIVFDAYSTDVLHPEERGAGAAVKVLGYRLAMLVSGGLALWLADRVLGWG 161 (402)
T ss_pred HHHHHhcCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhhHHHHHHHHHHHHHHHHHhHHHHHHHhcccCHH
Confidence 66654332 34666777777888888889999999999999999999999999999999999999999999885 5999
Q ss_pred HHHHHHHHHHHHHHHHHHhhccCCcCcCCCCCcchhhhhhhhhhhhhHHhhccccCCCcHHHhhhcHHHHHHHHHHHHHH
Q 014481 270 SVFYIFGLLGIAWFSGFKILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGS 349 (423)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 349 (423)
..|++.+++.++..+..++.+|+++++.++ ++ . .+. ....++++++||.++..++..++..
T Consensus 162 ~~f~i~a~~~l~~~l~~~~~~e~~~~~~~~---~~-~---~~~------------~~~~~~~l~~~~~~~~~l~~~~l~~ 222 (402)
T PRK11902 162 NTYLLMAGLMLAGALTTLWAPEPEVPARPP---RS-L---GEA------------VVGPLRDFFSRRGAWALLLLIVLYK 222 (402)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCccccccc---ch-h---HHH------------HHHHHHHHHhCcCHHHHHHHHHHHH
Confidence 999998888776655555555543321110 00 0 000 0013578899999888777766666
Q ss_pred HHHHHHHhhhhHHHHHhhCCChhhHHHHHHHHH-HHHHHHHHHHHHHhHHhhhcCC
Q 014481 350 WGHYTCLSWLPTYFSEELSLNLTEAAWVSILPP-LASVLVTSIAAQFADNLIATGV 404 (423)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~-~~~~~~~~~~g~l~dr~~~r~~ 404 (423)
........+.+.++.+.+|+++.+.+++....+ ++.+++.++++++.||+++|+.
T Consensus 223 ~~~~~~~~~~~~~l~~~~G~~~~~~g~~~~~~~~~~~i~g~~~~g~l~~r~g~~~~ 278 (402)
T PRK11902 223 LGDAFAGSLSTTFLIRGAGFSAGEVGIVNKTLGLAATIVGALAGGTLMVRLGLYRS 278 (402)
T ss_pred hHHHHHHHHHHHHHHHhcCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhHHHH
Confidence 554444445566676778999999998876655 4688999999999999998754
No 74
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=99.92 E-value=2.7e-22 Score=179.27 Aligned_cols=271 Identities=18% Similarity=0.167 Sum_probs=228.3
Q ss_pred HHHHHHHHHHHHHHhhhhhhhhhHHHhhhhhCCCcchhhHHHHHHHHHHHhhhhhhhhHhhHhcCchHHHHHHHHHHHHH
Q 014481 114 KLIGTTSLAFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLAT 193 (423)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~ 193 (423)
..++.+...+++.++......+.+|.+++.++++..+++++...+..++.+++++.|++.+|+|+|+.+++++.++++++
T Consensus 13 ~~~v~~t~lFfl~G~~~~l~diLip~l~~~f~ls~~~a~liqfaff~gYf~~~lpa~~~~kk~gyk~gi~lgL~l~avg~ 92 (422)
T COG0738 13 LAFVLLTSLFFLWGFITCLNDILIPHLKEVFDLTYFEASLIQFAFFGGYFIMSLPAGLLIKKLGYKAGIVLGLLLYAVGA 92 (422)
T ss_pred eHHHHHHHHHHHHHHHhhcchhhHHHHHHHhCccHHHHHHHHHHHHHHHHHHhccHHHHHHHhhhHHHHHHHHHHHHHHH
Confidence 34556666677777888888999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHH--HhhhHHHHHHHHHHHHHhhcccchHhHHHHHHhcCCCCchhhHHHHHHhhhhhHHHHHHhhHHHhhhc------
Q 014481 194 ALLP--LLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIEN------ 265 (423)
Q Consensus 194 ~~~~--~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~------ 265 (423)
.++. ....++..++++.++.|.|.+...+..+.++....++++....+++.+..+++|.++||++++.++.+
T Consensus 93 ~lF~pAa~~~~y~~FL~~lFila~Gi~~LetaaNp~v~~lg~~~~a~~rlnl~q~fn~lGa~~gp~~g~~lils~~~~~~ 172 (422)
T COG0738 93 ALFWPAASSKSYGFFLVALFILASGIGLLETAANPYVTLLGKPESAAFRLNLAQAFNGLGAILGPLLGSSLILSGVALTM 172 (422)
T ss_pred HHHhhhhhhhhHHHHHHHHHHHHhhhHHHHhccchHHHHhCCchhHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhhhhcc
Confidence 8873 23466788899999999999999999999999999998899999999999999999999999998762
Q ss_pred -------------cCchHHHHHHHHHHHHHHHHHHhhccCCcCcCCCCCcchhhhhhhhhhhhhHHhhccccCCCcHHHh
Q 014481 266 -------------LGWESVFYIFGLLGIAWFSGFKILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAI 332 (423)
Q Consensus 266 -------------~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 332 (423)
..|+++|...+...++..+.....+.+..+...+...+. +.....++
T Consensus 173 ~~~~~~~~~~~~~~~v~~pYl~~~~~lvll~v~~~~~k~p~~~~~~~~~~~~--------------------~~~~~~~l 232 (422)
T COG0738 173 SAAQILAIKGADASSVQFPYLILAGLLVLLAVLILLSKLPDLQVAAPSLGAS--------------------GSAGLSSL 232 (422)
T ss_pred CHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHhccCCcCCccccccccc--------------------ccchHHHH
Confidence 137788888777776666655554433322211111100 00024789
Q ss_pred hhcHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHhhCCChhhHHHHHHHHHHHHHHHHHHHHHHhHHhhhcCC
Q 014481 333 FRSKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGV 404 (423)
Q Consensus 333 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~r~~ 404 (423)
+++|.++...+..|++...+..+..|++.|+.+..|.+..+++...+..+++.++|+.++.++..|+...|.
T Consensus 233 ~~~~~~~~gvl~~FlYVG~Eva~gsfl~~y~~~~~g~~~~~aa~~~s~~~~~~~vGRFig~~lm~~~~~~k~ 304 (422)
T COG0738 233 FQNKHLRLGVLAIFLYVGAEVAIGSFLVSYLEELLGLNEQQAAYYLSFFWVGFMVGRFIGSALMSRIKPEKY 304 (422)
T ss_pred HhChHHHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHH
Confidence 999999999999999999999999999999998789999999999999999999999999999999886644
No 75
>TIGR00901 2A0125 AmpG-related permease.
Probab=99.91 E-value=1e-22 Score=190.72 Aligned_cols=252 Identities=14% Similarity=0.100 Sum_probs=191.5
Q ss_pred hhhhhhHHHhhhhhCCCcchhhHHHHHHHHHHHhhhhhhhhHhhHh-----cCchHH-HHHHHHHHHHHHHHHHhh--hH
Q 014481 131 VNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIF-----GGRKVL-QTGVLIWSLATALLPLLA--GF 202 (423)
Q Consensus 131 ~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-----G~r~~~-~~~~~~~~~~~~~~~~~~--~~ 202 (423)
...++.+|.+.+++|+|.+++|+.... .+...+ .+++|+++||+ ||||.+ +.+.++.++..+.+++.. .+
T Consensus 5 ~~~~~~~~~~~~~~g~s~~~~g~~~~~-~~~~~~-~~~~g~~~Dr~~~~~~Grr~~~l~~~~~~~~~~~~~l~~~~~~~~ 82 (356)
T TIGR00901 5 GLVGNTLPYWLRSKNVSLKTIGFFSLV-GLPYSL-KFLWSPLVDTVYLPFFGRRRSWLVLTQVLLLSLLLILSFLVPSTD 82 (356)
T ss_pred hhHHhHHHHHHHHcCCCHHHHHHHHHH-HHHHHH-HHHHHHHHhcccCCCCCccHHHHHHHHHHHHHHHHHHHcCCcchh
Confidence 456678899999999999999999765 555554 89999999998 899975 556666666654553332 34
Q ss_pred HHHHHHHHHHHHhhcccchHhHHHHHHhcCCCCchhhHHHHHHhhhhhHHHHHHhhHHHhhhccC--------chHHHHH
Q 014481 203 MPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLG--------WESVFYI 274 (423)
Q Consensus 203 ~~~~~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g--------w~~~~~~ 274 (423)
.+.+....++.+++.+...++..+++.|++|+++|+++.++...+..+|.++++.+++.+.+..| ||..|++
T Consensus 83 l~~l~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~~~~g~~~~~~~~wr~~f~i 162 (356)
T TIGR00901 83 LPLLAGLAFLIAFFSATQDIALDAWRLEILSDEELGYGSTIYIVGYRAGMLLSGSLALVLASPEFANTGLITLWGYIFFW 162 (356)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhhhchHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccccHHHHHH
Confidence 45666777788888888899999999999999999999999999999999999999999988888 9999999
Q ss_pred HHHHHHHHHHHHHhh-ccCCcCcCCCCCcchhhhhhhhhhhhhHHhhccccCCCcHHHhhhcHH---HHHHHHHHHHHHH
Q 014481 275 FGLLGIAWFSGFKIL-QEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKA---VWAMIYAHFCGSW 350 (423)
Q Consensus 275 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~l~~~~~~~ 350 (423)
.++..++..+..++. +|+.+. ... +++.. +. . ...++++++++. ++.+.+..++...
T Consensus 163 ~ai~~l~~~~~~~~~~~e~~~~-~~~--~~~~~----~~----~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (356)
T TIGR00901 163 TALLILPGLLVTLFLAKEPQED-ASV--PKPLT----QA----V--------LKPIREFFQRKNMIQALLLLLLIVLYKL 223 (356)
T ss_pred HHHHHHHHHHHHHHhccCCCcc-ccc--chhHH----HH----H--------HHHHHHHHHhcCchHHHHHHHHHHHHHH
Confidence 888777665554443 442211 100 00000 00 0 012456677765 6767777777778
Q ss_pred HHHHHHhhhhHHHHHhhCCChhhHHHHHHHHH-HHHHHHHHHHHHHhHHhhhcCC
Q 014481 351 GHYTCLSWLPTYFSEELSLNLTEAAWVSILPP-LASVLVTSIAAQFADNLIATGV 404 (423)
Q Consensus 351 ~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~-~~~~~~~~~~g~l~dr~~~r~~ 404 (423)
..+....++|.|+++ +|+++.+.+.+....+ ++.+++.+++|++.||+++|+.
T Consensus 224 ~~~~~~~~~~~~l~~-~g~~~~~~g~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~ 277 (356)
T TIGR00901 224 GDSAATVLTTLFLLD-MGFSKEEIALVAKINGLLGAILGGLIGGIIMQPLNILYA 277 (356)
T ss_pred HHHHHHHHHHHHHHH-cCCCHHHHHHHhHHHHHHHHHHHHHHHHHHHhhhhHHHH
Confidence 888888999999987 8999999998887666 6788999999999999998754
No 76
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=99.91 E-value=7.2e-23 Score=219.37 Aligned_cols=271 Identities=15% Similarity=0.087 Sum_probs=200.0
Q ss_pred HHHHHHHHHHHhhhhhhhhhHH-HhhhhhCCCc-chhhHHHHHHHHHHHhhhhhhhhHhhHhcCchHHHH--HHHHHHHH
Q 014481 117 GTTSLAFVICNMDKVNLSVAII-PMSHRFGWNS-SVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQT--GVLIWSLA 192 (423)
Q Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~s~-~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~--~~~~~~~~ 192 (423)
...++..+...+....+..+.. .+..+.+.+. ...++..+++.++++++++++|+++||+|||+++.. ...+....
T Consensus 18 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~G~laDr~~rk~~~~~~~~~~~~~~~ 97 (1140)
T PRK06814 18 WTQFFGAFNDNFLKNALVILILYGLSGALGAYNNALVTLAGAVFILPFFIFSALAGQLADKYDKAKLAKILKFAEIGIAA 97 (1140)
T ss_pred HHHHHhHHHHHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHHHHHhhhHHhhhhhccHHHHHHHHHHHHHHHHH
Confidence 3334444443433333333322 3333443332 447888889999999999999999999999997643 22222222
Q ss_pred HHHHHHhhhHHHHHHHHHHHHHhhcccchHhHHHHHHhcCCCCchhhHHHHHHhhhhhHHHHHHhhHHHhhhccCchHHH
Q 014481 193 TALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVF 272 (423)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~~ 272 (423)
..+.++..++++.++++|+++|++.+...|+..+++.+++++++|++++|+.+.+.++|.++||+++|++....||++.|
T Consensus 98 ~~~~~~~~~s~~~l~~~~~l~gi~~a~~~p~~~a~l~~~~~~~~~~~a~~~~~~~~~ig~~igp~l~g~l~~~~~~~~~~ 177 (1140)
T PRK06814 98 LAIYGFHLNSVPLLFAALFLMGIHSALFGPIKYSILPDHLNKDELLGANALVEAGTFIAILLGTIIGGLATISGNFVILV 177 (1140)
T ss_pred HHHHHHHHhhHHHHHHHHHHHHHHHHhhchHHHHhhHhhcCccccchhhHHHHHHHHHHHHHHHHHHHHHHhccccHHHH
Confidence 22333444778999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhccCCcCcCCCCCcchhhhhhhhhhhhhHHhhccccCCCcHHHhhhcHHHHHHHHHHHHHHHHH
Q 014481 273 YIFGLLGIAWFSGFKILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGH 352 (423)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 352 (423)
++.++..++.+++.++++++++............ +. . ...++.+.+++.+|...+..++.++..
T Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~---~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (1140)
T PRK06814 178 ALLMGIAVLGWLASLFIPKTGNAAPDLKIDRNII----RS---T---------ITLLKYAKADKRIWLAILGISWFWLVG 241 (1140)
T ss_pred HHHHHHHHHHHHHHhhCCCCCCCCCCCeeccchH----HH---H---------HHHHHHHhcCchHHHHHHHHHHHHHHH
Confidence 5555555555555566665543221111100000 00 0 013577889999999988888888888
Q ss_pred HHHHhhhhHHHHHhhCCChhhHHHHHHHHHHHHHHHHHHHHHHhHHhhhcC
Q 014481 353 YTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATG 403 (423)
Q Consensus 353 ~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~r~ 403 (423)
..+..++|.|+++.+|.++..++++.+...++.++|.++.|++.++..+++
T Consensus 242 ~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~g~l~~~~~~~~ 292 (1140)
T PRK06814 242 AVVLSQLPLLAKETLGGDENVATLFLAVFSVGVAVGSFLASKLSEGRITLL 292 (1140)
T ss_pred HHHHHHhHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHHHHhCCceeee
Confidence 888899999999989999999999999999999999999999998766554
No 77
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.91 E-value=2.6e-24 Score=190.69 Aligned_cols=239 Identities=16% Similarity=0.151 Sum_probs=209.4
Q ss_pred hhhCCCcchhhHHHHHHHHHHHhhhhhhhhHhhHhcCchHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhhcccch
Q 014481 142 HRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPLLAGFMPGLVLSRVLVGIGEGVSP 221 (423)
Q Consensus 142 ~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~ 221 (423)
++.+-+++++|++++.+.+.+.+.+++.|.++||+|+|..+++|++++...++++ .+.++++.++++|.++|+|.+...
T Consensus 99 ~~~~~e~~~iG~LFaskA~~qllvnp~~G~l~~~iGy~ipm~~Gl~vmf~sTilF-afg~sy~~l~vAR~LQgvgsA~~~ 177 (464)
T KOG3764|consen 99 ISLDRENTQIGLLFASKALVQLLVNPFFGNLIDRIGYKIPMVAGLFVMFLSTILF-AFGNSYPMLFVARSLQGVGSAFAD 177 (464)
T ss_pred cCccccccchhHHHHHHHHHHHHhcccchhhHHHhccccHHHHHHHHHHHHHHHH-HHcchhHHHHHHHHHhhhhHHHHH
Confidence 4456788899999999999999999999999999999999999999999999888 577888999999999999999999
Q ss_pred HhHHHHHHhcCCCC-chhhHHHHHHhhhhhHHHHHHhhHHHhhhccCchHHHHHHHHHHHHHHHHHHhhccCCcCcCCCC
Q 014481 222 SAATDLIARSIPLE-ERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAWFSGFKILQEGETSNGATL 300 (423)
Q Consensus 222 ~~~~~~i~~~~~~~-~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (423)
.+..++++|.+|++ +|++++|+...+.++|.++||++||.+.+..|.+.+|.+.+++.++-..+.+++.++.+.+...
T Consensus 178 tsglamlAd~f~~d~er~~vmGialgfislG~lvgPpfGGilYe~~Gk~aPFlVL~~v~Lld~~L~l~vi~p~~~~~~~- 256 (464)
T KOG3764|consen 178 TSGLAMLADVFPEDNERGSVMGIALGFISLGVLVGPPFGGILYEFAGKSAPFLVLAIVLLLDGALQLLVIEPTEMDPDS- 256 (464)
T ss_pred hhhHHHHHHHcccchhhhHHHHHHHHHHhccceecCCcccchHhhcCCcCcHHHHHHHHHHHHHHHHheeCccccCccc-
Confidence 99999999999866 5899999999999999999999999999999999999999999998877777766654332211
Q ss_pred CcchhhhhhhhhhhhhHHhhccccCCCcHHHhhhcHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHhhCCChhhHHHHHHH
Q 014481 301 APRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSIL 380 (423)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~ 380 (423)
..+..++++++++|.++.........+.........++.++.+.+..+..+.|..+..
T Consensus 257 ----------------------~~~~~~~~~Ll~dP~I~~~agai~~~n~~lafLePtlslwm~e~m~~p~w~~G~~fLp 314 (464)
T KOG3764|consen 257 ----------------------TEQGTPMWSLLMDPYILLIAGAITFSNSSLAFLEPTLSLWMLETMFTPGWEVGLAFLP 314 (464)
T ss_pred ----------------------cccCccHHHHHhCchHhhhhcchhhccchHHHhCcccHHHHHHhccCCCcceeeeecc
Confidence 1112357899999999998888888888888888899999988888666699999999
Q ss_pred HHHHHHHHHHHHHHHhHHhhhcCC
Q 014481 381 PPLASVLVTSIAAQFADNLIATGV 404 (423)
Q Consensus 381 ~~~~~~~~~~~~g~l~dr~~~r~~ 404 (423)
..+...++..+.|.+.||++.-++
T Consensus 315 ~~~~y~ig~~lfg~la~k~~~~~w 338 (464)
T KOG3764|consen 315 ASLSYAIGTNLFGKLADKYPHLRW 338 (464)
T ss_pred cccchhccCchHHHHHHhcCchhH
Confidence 999999999999999999995543
No 78
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.90 E-value=1.3e-21 Score=185.92 Aligned_cols=272 Identities=12% Similarity=0.037 Sum_probs=196.1
Q ss_pred HHHHHHHHHHHHhhhhhhhhhHHHh-hhhhCCCcchhhHHHHHHHHHHHhhhhhhhhHhhHhcCchHHHHHHHHHHHHHH
Q 014481 116 IGTTSLAFVICNMDKVNLSVAIIPM-SHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATA 194 (423)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~ 194 (423)
++.+...+++.+.......+.+|.+ .+++|.+..+.|++.+++.++..++++++|+++||+|||+.++.+.+..++...
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~l~~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~ 83 (396)
T TIGR00882 4 FWMFGLFFFLYFFIMSAYFPFFPIWLHDVNGLSKTDTGIVFSCISLFSILFQPLFGLISDKLGLKKHLLWIISGLLVLFA 83 (396)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHH
Confidence 3445556667777777888887774 567899999999999999999999999999999999999999887666655433
Q ss_pred HHHH--hh-----hHHHHHHHHHHHHHhhcccchHhHHHHHHhcCCCCchhhHHHHHHhhhhhHHHHHHhhHHHhhhccC
Q 014481 195 LLPL--LA-----GFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLG 267 (423)
Q Consensus 195 ~~~~--~~-----~~~~~~~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g 267 (423)
.... .. +.+..+++.+++.|++.+...+....+..+.. ++++..+|......++|.++||++++.+.+ .+
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~--~~~~~~~g~~~~~~~~g~~~g~~~~g~l~~-~~ 160 (396)
T TIGR00882 84 PFFIYVFGPLLQSNILVGAIVGGLYLGFVFSAGAGAIEAYIEKVS--RNSNFEYGKARMFGCVGWALCASIAGILFS-ID 160 (396)
T ss_pred HHHHHHhhhHHHHHHHHHHHHHHHHHHHHhccchhhHHHHHHHhh--hhcccccchhhhhcccHHHHHHHHHhhhhc-cC
Confidence 2211 11 22334566788899988888888888777753 344567788888899999999999998875 49
Q ss_pred chHHHHHHHHHHHHHHHHHHhhccCCcCcCCCCCcchhhhhhhhhhhhhHHhhccccCCCcHHHhhhcHHHHHHHHHHHH
Q 014481 268 WESVFYIFGLLGIAWFSGFKILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFC 347 (423)
Q Consensus 268 w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 347 (423)
|++.|++.+++.++..+..+...+++++++.. .+..+ . ..+..+..++++++|||.++.+.+..++
T Consensus 161 ~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-----~--------~~~~~~~~~~~~~l~~~~~~~~~l~~~~ 226 (396)
T TIGR00882 161 PQIVFWLGSGFALILMLLLMFAKPKAPSSATV-ANALG-----A--------NASAFSLKLALELFRQRKFWMFVLYVVG 226 (396)
T ss_pred chHHHHHHHHHHHHHHHHHHHhCCCCchhhhh-hcccc-----c--------ccCCCCHHHHHHHHcCCcHHHHHHHHHH
Confidence 99999998888777655554443332211100 00000 0 0000111235688899998877777666
Q ss_pred HHHHHHHHHhhhhHHHHHhh---CCChhhHHHHHHHHHHHHHHHHHHHHHHhHHhhhcCC
Q 014481 348 GSWGHYTCLSWLPTYFSEEL---SLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGV 404 (423)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~~---g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~r~~ 404 (423)
....+.....+.+.|+.+.+ +.+....+.+.+...+..+++.+..+++.||+++|+.
T Consensus 227 ~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~g~~~~~~~i~~~~~~~~~g~l~~r~g~~~~ 286 (396)
T TIGR00882 227 VACVYDVFDQQFANFFTSFFATPQQGTRVFGYVTTMGELLNALIMFCAPLIINRIGAKNA 286 (396)
T ss_pred HHHHHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchh
Confidence 66666667678888887654 4556667888888889999999999999999998854
No 79
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.90 E-value=7.6e-22 Score=212.11 Aligned_cols=272 Identities=16% Similarity=0.140 Sum_probs=198.1
Q ss_pred HHHHHHHHHh-hhhhhhhhHHHhhhhhCCCc--chhhHHHHHHHHHHHhhhhhhhhHhhHhcCchHHHHHHHHHHHHHHH
Q 014481 119 TSLAFVICNM-DKVNLSVAIIPMSHRFGWNS--SVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATAL 195 (423)
Q Consensus 119 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~s~--~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~ 195 (423)
+++..++..+ +........+.+..+++.+. ...+++.+++.+++.++++++|+++||+|||++++++.++.++..++
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~G~l~Dr~grk~~l~~~~~~~~~~~~~ 93 (1146)
T PRK08633 14 LLLTQFLNAFNDLGHKILIQNTLIKAYDGSEQVILTAIVNALFLLPFLLLSSPAGFLADKFSKNRVIRIVKLFEVGLTLL 93 (1146)
T ss_pred HHHHHHHhHHHHHHHHHHHHHHHHHHcCcccHHHHHHHHHHHHHHHHHHHhhhHhhhcccccHHHHHHHHHHHHHHHHHH
Confidence 3334444333 33344444555656666554 34689999999999999999999999999999999988765555543
Q ss_pred HH--HhhhHHHHHHHHHHHHHhhcccchHhHHHHHHhcCCCCchhhHHHHHHhhhhhHHHHHHhhHHHhhhc--------
Q 014481 196 LP--LLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIEN-------- 265 (423)
Q Consensus 196 ~~--~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~-------- 265 (423)
.. ...++++.++++|++.|++.+...++..+++.+++|+++|++++|+...+..+|.++|+++++++.+.
T Consensus 94 ~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~ig~~lg~~l~~~l~~~~~~~~~~~ 173 (1146)
T PRK08633 94 IVLAYYLGWFWLAFAVTFLLGAQSAIYSPAKYGIIPELVGKENLSRANGLLEAFTIVAILAGTALFSFLFESVNGNTPSE 173 (1146)
T ss_pred HHHHHHHccHHHHHHHHHHHHHHHHhhchHHHhhhHHhcCcccchhhhhHHHHHHHHHHHHHHHHHHHHHHhhccccccc
Confidence 32 23466889999999999999999999999999999999999999999999999999999999999875
Q ss_pred c-CchHHHHHHHHHH-HHHHHHHHhhccCCcCcCCCCCcchhhhhhhhhhhhhHHhhccccCCCcHHHhhhcHHHHHHHH
Q 014481 266 L-GWESVFYIFGLLG-IAWFSGFKILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIY 343 (423)
Q Consensus 266 ~-gw~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 343 (423)
+ +|.+.+.+.++.. ++.++..+.+++.++...... +...... ... ....++.+++++.++...+
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~----~~~---------~~~~~~~l~~~~~~~~~~~ 239 (1146)
T PRK08633 174 ILGRIAPAGLVLLAVAVLGLIFAYRLPKVPAAAPEVF-DKKKYLF----PKL---------LWRNLKLLRSDRVLWLAII 239 (1146)
T ss_pred cccchHHHHHHHHHHHHHHHHHHhcCcCCCCCCcccc-ccccccc----HHH---------HHHHHHHHhcCcHHHHHHH
Confidence 2 3444444433333 233334444555433221110 0000000 000 0012567788898888887
Q ss_pred HHHHHHHHHHHHHhhhhHHHHHhhCCChh-hHHHHHHHHHHHHHHHHHHHHHHhHHhhhcCC
Q 014481 344 AHFCGSWGHYTCLSWLPTYFSEELSLNLT-EAAWVSILPPLASVLVTSIAAQFADNLIATGV 404 (423)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~~~~~~~g~s~~-~~~~~~~~~~~~~~~~~~~~g~l~dr~~~r~~ 404 (423)
..++..........++|.|+.+.+|++.. ..+++.+...++.+++.++.+++.||+++++.
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~g~~~~~~~ig~~~g~~~~g~l~~r~~~~~~ 301 (1146)
T PRK08633 240 GLSYFWFISQLAQANFPAYAKEVLGLDNTFQVQYLLAASAIGIGIGSLLAGRLSGRHIELGL 301 (1146)
T ss_pred HHHHHHHHHHHHHHhhHHHHHHHhCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhCCceEccc
Confidence 77777777777888999999988999998 99999999999999999999999999887643
No 80
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=99.89 E-value=5.4e-21 Score=176.85 Aligned_cols=270 Identities=14% Similarity=0.035 Sum_probs=195.9
Q ss_pred HhhhhhhhhhHHHhhhhhCCCcch-hhHHHHHHHHHHHhhhhhhhhHhhHhcCchHHHHHHHHHHHHHHHHHHhhhHHHH
Q 014481 127 NMDKVNLSVAIIPMSHRFGWNSSV-AGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPLLAGFMPG 205 (423)
Q Consensus 127 ~~~~~~~~~~~~~~~~~~~~s~~~-~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (423)
.-.+...+.+.|.+.+++|++..+ .|.+.+++..+++++.++.|+++||+|.|+++.++.+.+++..++++ +++++..
T Consensus 39 ~e~R~n~s~a~p~L~~elglT~~qv~G~I~s~F~ysYal~qIp~GlLaDrlG~K~vL~l~~l~Wsl~t~L~~-fa~Sl~~ 117 (511)
T TIGR00806 39 AQFRPGESFITPYLLTVLNFTEETVTNEIIPVLPYSHLAVLVPVFLLTDYLRYKPVLVLQALSFVCVWLLLL-LGTSVWH 117 (511)
T ss_pred HHhhchHHHHHHHHHHHcCCCHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHH-HHHHHHH
Confidence 345677788889999999999999 99999999999999999999999999999999999999999998884 6777899
Q ss_pred HHHHHHHHHhhcccchHhHHHHHHhcCCCCchhhHHHHHHhhhhhHHHHHHhhHHHhhhccCchHHHHHH---HHHHHHH
Q 014481 206 LVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIF---GLLGIAW 282 (423)
Q Consensus 206 ~~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~~~~~---~~~~~~~ 282 (423)
+.++|++.|++.|... +...++..|+|+++|+++.|++..+..+|.+++++++++ +..+|||+.+... .....+.
T Consensus 118 L~i~R~llGvaEA~~~-A~~syI~~WfP~kER~ratsi~~sg~~vG~~Ia~~L~ql-l~s~gWr~y~~Ln~Isl~s~~~a 195 (511)
T TIGR00806 118 MQLMEVFYSVTMAARI-AYSSYIFSLVPPSRYQRAAAYSRAAVLLGVFLSSVLGQL-LVTLGWISYSTLNIISLVFMTFS 195 (511)
T ss_pred HHHHHHHHHHHHHHHH-HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHhcCchhHHHHHHHHHHHHHHH
Confidence 9999999999999999 999999999999999999999999999999999999999 5567999765443 2223445
Q ss_pred HHHHHhhccCCcCcCCCCCc--c-h--hh-hhhhhhhhhhHHhhcccc-------CCCcHHHhhhcHHHHHHHHHHHHHH
Q 014481 283 FSGFKILQEGETSNGATLAP--R-S--NY-INMKKSLSASLEEMGESL-------KDVPWKAIFRSKAVWAMIYAHFCGS 349 (423)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~--~-~--~~-~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~l~~~~~~ 349 (423)
++..+++|..++..--...+ + . .. ............+..+.. -...++..++|+.++...+-..+..
T Consensus 196 ~~~a~~LP~~~~sl~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~y~n~~vl~WSlWwa~a~ 275 (511)
T TIGR00806 196 VFLALFLKRPKRSLFFNRLEDVRGALPCELDQMVPGPGGKLEDYLGTCRDSFLVRMLSELVTIYRNPQLLLWSLWWVFNS 275 (511)
T ss_pred HHHHHhCCCCchhhhhccccccccccccccccCCCCCccccchhhhhhhhHHHHHHHHHHHHHhcCcchhhhhHHHHHHh
Confidence 66667777544311000000 0 0 00 000000000000000000 0112345678888888888888888
Q ss_pred HHHHHHHhhhhHHHHHhhCCChhhHHHHHHHHHHHHHHHHHHHHHHhHHh
Q 014481 350 WGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNL 399 (423)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~ 399 (423)
.+++.+.+|......+..+-.+..-|.+-++..+.+.+..+..|++-.++
T Consensus 276 ~g~~qv~~Y~Q~LW~~v~~~~~~yNG~veA~~tllga~~a~~ag~~~~~w 325 (511)
T TIGR00806 276 AGYYLITYYVHTLWGTLDESLNKYNGAVDAASTLLGAITSFIAGFVNIRW 325 (511)
T ss_pred hHHHHHHHHHHHHHHHcCCCccccCCHHHHHHHHHHHHHHHHHHhhcCCc
Confidence 88888777777666554332222456677777888888888889885554
No 81
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=99.89 E-value=1e-20 Score=182.99 Aligned_cols=288 Identities=13% Similarity=0.148 Sum_probs=191.1
Q ss_pred HHHHHHHHHHHHHHhhhhhhhhhH-HHhhhhhCCCcchhhHHHHHHHHHHHhhhhhhhhHhhH-hcCchHHHHHHHHHHH
Q 014481 114 KLIGTTSLAFVICNMDKVNLSVAI-IPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKI-FGGRKVLQTGVLIWSL 191 (423)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr-~G~r~~~~~~~~~~~~ 191 (423)
+.+..+++..+...+..+.....+ .++.+++|++..+.+++.+.+.....+..+++|+++|| +|||++++++.+++++
T Consensus 14 ~~~~~~~~~~~~er~~~y~~~~~l~~yl~~~lg~~~~~a~~i~~~~~~~~~~~~~~~G~laDr~~G~r~~~~~g~~~~~~ 93 (489)
T PRK10207 14 RPFFMIFFVELWERFGYYGVQGILAVFFVKQLGFSQEQAFITFGAFAALVYGLISIGGYVGDHLLGTKRTIVLGAIVLAI 93 (489)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhhHHHhhhhccchHHHHHHHHHHHHH
Confidence 444455555556666666555554 44678899999999999999998888899999999999 9999999999999999
Q ss_pred HHHHHHHhhhHHHHHHHHHHHHHhhcccchHhHHHHHHhcCCCC--chhhHHHHHHhhhhhHHHHHHhhHHHhhhccCch
Q 014481 192 ATALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLE--ERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWE 269 (423)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~i~~~~~~~--~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~ 269 (423)
+.+++....+....++++|+++|+|.|...+...++++|.+|++ +|++++++++.+.++|..+||.+++++.++.|||
T Consensus 94 g~~~~~~~~~~~~ll~~~~~l~~ig~g~~~~~~~~li~~~~p~~~~~~~~~~~~~~~~~nig~~~g~~l~g~l~~~~gw~ 173 (489)
T PRK10207 94 GYFMTGMSLLKPDLIFIALGTIAVGNGLFKANPASLLSKCYPPKDPRLDGAFTLFYMSINIGSLISLSLAPVIADKFGYS 173 (489)
T ss_pred HHHHHHHhccchhHHHHHHHHHHhccccccCCHHHHHHHhcCCCchhhhcchhHHHHHHHHHHHHHHHHHHHHHHhhChH
Confidence 99887543333334568899999999999999999999999876 4578999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhhccCCcCcC--CCCCcch--hhhhh---------h-hh-hhh-hHHh--------------
Q 014481 270 SVFYIFGLLGIAWFSGFKILQEGETSNG--ATLAPRS--NYINM---------K-KS-LSA-SLEE-------------- 319 (423)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~--~~~~~---------~-~~-~~~-~~~~-------------- 319 (423)
+.|++.++..++.++.....++..+... .+.++.+ ..... . .. ... ....
T Consensus 174 ~~F~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~f 253 (489)
T PRK10207 174 VTYNLCGAGLIIALLVYFACRGMVKDIGSEPDHKPMSFSKLLLVLLGSVVMIFVCAWLMHNVEVANLVLIVLSIVVTIIF 253 (489)
T ss_pred HHHHHHHHHHHHHHHHHHHcchhhcccCCCCCccchhhhhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHH
Confidence 9999866544444433333332211110 0000000 00000 0 00 000 0000
Q ss_pred hccccCCCcHHHhhhcHHHHHHHHH--HHHHHHHHHHHHhhhhHHHHHhhCCCh----hhHHHHHHHHHHHHHHHHHHHH
Q 014481 320 MGESLKDVPWKAIFRSKAVWAMIYA--HFCGSWGHYTCLSWLPTYFSEELSLNL----TEAAWVSILPPLASVLVTSIAA 393 (423)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~l~--~~~~~~~~~~~~~~~~~~~~~~~g~s~----~~~~~~~~~~~~~~~~~~~~~g 393 (423)
..+..+ ..+.+|+|.+....+. ..+....+....+.++.|.++..+.+. .....+.....+..++..++.+
T Consensus 254 ~~~~~~---~~~~~r~r~~~~~~l~~~~~~f~~~~~q~~~~l~l~~~~~~~~~~~G~~i~~~~~~~~n~~~iii~~pl~~ 330 (489)
T PRK10207 254 FREAFK---LDKTGRNKMFVAFVLMLEAVVFYILYAQMPTSLNFFAINNVHHEILGFSINPVSFQALNPFWVVVASPILA 330 (489)
T ss_pred HHHHhc---CCHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHhccccccceEECHHHHHhHhHHHHHHHHHHHH
Confidence 000000 0145666665543322 444455556666778888875333211 1233455555566778888899
Q ss_pred HHhHHhhhcCC
Q 014481 394 QFADNLIATGV 404 (423)
Q Consensus 394 ~l~dr~~~r~~ 404 (423)
++.||+++|+.
T Consensus 331 ~l~~rl~~r~~ 341 (489)
T PRK10207 331 GIYTHLGSKGK 341 (489)
T ss_pred HHHHHHhhCCC
Confidence 99999998864
No 82
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.89 E-value=2.6e-21 Score=185.32 Aligned_cols=270 Identities=11% Similarity=0.035 Sum_probs=179.1
Q ss_pred HHHHHHHHHHhhhhhhhhhHHH-hhhhhCCCcchhhHHHHHHHHHHHhhhhhhhhHhhHhcCchHHHHHHHHHHHHHHHH
Q 014481 118 TTSLAFVICNMDKVNLSVAIIP-MSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALL 196 (423)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~ 196 (423)
.+.+.+++..+..+...++++. +.+++|++..++|++.+++.++..++++++|+++||+|||++++++..+.+++....
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~g~~~s~~~l~~~i~~~~~G~l~Dr~g~r~~~~~~~~~~~~~~~~~ 93 (420)
T PRK09528 14 IFSLFFFFFFFIWSSWFSFFPIWLHDINGLSGTDTGIIFSANSLFALLFQPLYGLISDKLGLKKHLLWIISGLLVLFGPF 93 (420)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHH
Confidence 3344555555656666777766 455599999999999999999999999999999999999999988766655443222
Q ss_pred HH--hhh-----HHHHHHHHHHHHHhhcccchHhHHHHHHhcCCCCchhhHHHHHHhhhhhHHHHHHhhHHHhhhccCch
Q 014481 197 PL--LAG-----FMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWE 269 (423)
Q Consensus 197 ~~--~~~-----~~~~~~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~ 269 (423)
.. ... .+...++++++.|.+.....+....+..+ . .++++..+|......++|..++|++++.+.+. +|+
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~-~~~ 170 (420)
T PRK09528 94 FIYVFAPLLQYNILLGAIVGGIYLGFGFLAGAGAIEAYIER-V-SRRSGFEYGRARMWGSLGWALCAFIAGILFNI-NPQ 170 (420)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhhhccchhhhhhHHHH-H-HhhccccchhhHHhhhHHHHHHHHHHHHHHhc-Cch
Confidence 11 111 11112333444444444444444444332 2 24678888999999999999999999998864 899
Q ss_pred HHHHHHHHHHHHHHHHHHhhccCCcCcCCCCCcchhhhhhhhhhhhhHHhhccccCCCcHHHhhhcHHHHHHHHHHHHHH
Q 014481 270 SVFYIFGLLGIAWFSGFKILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGS 349 (423)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 349 (423)
+.|++.+++.++.++..++.+++++++....+++++ + .+.......++.+|||.+|.+.+..++..
T Consensus 171 ~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~---------~~~~~~~~~~~~l~~~~~~~l~l~~~~~~ 236 (420)
T PRK09528 171 INFWLGSGSALILLVLLFFAKPDAPSTAKVANALGA-----N---------ASAVSLKDALALLKLPKFWFLVLYVIGVA 236 (420)
T ss_pred HhHHHHHHHHHHHHHHHhcccccccchhhhccchhc-----c---------cccccHHHHHHHccCCCeEeehHHHHHHH
Confidence 999998888776665555554433221110000000 0 00000112346788888877666555555
Q ss_pred HHHHHHHhhhhHHHHHhh---CCChhhHHHHHHHHHHHHHHHHHHHHHHhHHhhhcCC
Q 014481 350 WGHYTCLSWLPTYFSEEL---SLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGV 404 (423)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~---g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~r~~ 404 (423)
........++|.|+.+.+ +.+..+.+.+.++..++.+++.++.|++.||+++|+.
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~ 294 (420)
T PRK09528 237 CFYDVFDQQFPNFFASFFATPEQGTRVFGYLNSFQVFLEALIMFFAPFIINRIGAKNA 294 (420)
T ss_pred HHHHHHHHHHHHHHHHHHhccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcchh
Confidence 555555567787776543 5566778888999999999999999999999998854
No 83
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=99.89 E-value=4.2e-21 Score=169.07 Aligned_cols=249 Identities=20% Similarity=0.261 Sum_probs=213.8
Q ss_pred hhhhhhhhhHHHhhhhhCCCcchhhHHHHHHHHHHHhhhhhhhhHhhHhcCchHHHHHHHHHHHHHHHHHHhhhHHHHHH
Q 014481 128 MDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPLLAGFMPGLV 207 (423)
Q Consensus 128 ~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (423)
-....+++.++.+.+++|+|.+..|++.++..+...+.+++..++..|+|.++.+..++++.+++.++-... +.+.++
T Consensus 26 ~~itsvgPLL~~Ir~~~gls~s~aGlLTtLPll~fg~~ap~a~~Lar~~g~er~l~~~Llli~~G~~iR~~~--~~~~L~ 103 (395)
T COG2807 26 PAITSVGPLLDEIRQDLGLSFSVAGLLTTLPLLAFGLFAPAAPRLARRFGEERSLFLALLLIAAGILIRSLG--GLPLLF 103 (395)
T ss_pred hhhhhhhhhHHHHHHHhcccHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhHHHHHHHHHHHHHHHHHHhcc--cHHHHH
Confidence 455777889999999999999999999999999999999999999999999999999999999998776443 447788
Q ss_pred HHHHHHHhhcccchHhHHHHHHhcCCCCchhhHHHHHHhhhhhHHHHHHhhHHHhhhcc-CchHHHHHHHHHHHHHHHHH
Q 014481 208 LSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENL-GWESVFYIFGLLGIAWFSGF 286 (423)
Q Consensus 208 ~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~-gw~~~~~~~~~~~~~~~~~~ 286 (423)
..-.+.|.|.+......++.+-+.|| ++-+..+|+|....++|..+++.+...+.++. |||....+.+.++++.++.+
T Consensus 104 ~gt~l~G~gIav~nVLLPslIK~~Fp-k~~~~mtglYs~sl~~~aaLaa~lavpla~~~~gW~~aL~~WAl~allAl~~W 182 (395)
T COG2807 104 LGTLLAGAGIAVINVLLPSLIKRDFP-KRVGLMTGLYSTSLGAGAALAAALAVPLAQHSGGWRGALGFWALLALLALLIW 182 (395)
T ss_pred HHHHHHHhhHHHHHHhhhHHHHhhcc-cchhhHHhHHHHHHHHHHHHHhhhhhHHHHhhccHHHHHHHHHHHHHHHHHHH
Confidence 89999999999999999999999999 88999999999999999999999999998886 79999999999988877665
Q ss_pred HhhccCCcCcCCCCCcchhhhhhhhhhhhhHHhhccccCCCcHHHhhhcHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHh
Q 014481 287 KILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEE 366 (423)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 366 (423)
+--...++......+ ..+-..++|+|.-|.+.+.+.++...+|....|+|.++.|+
T Consensus 183 lPq~~r~~~~~~~~~------------------------~~~~~~vw~~~~aW~vtLfmGlqS~~~Y~~~~WLP~ili~~ 238 (395)
T COG2807 183 LPQALREQAASIATK------------------------LVSVRKVWRSPLAWQVTLFMGLQSLLYYIVIGWLPAILIDR 238 (395)
T ss_pred hhhcccccccccccc------------------------cccccccccCchhHHHHHHHHhhHHHHHHHHHHHHHHHHHc
Confidence 443211111111000 01124689999999999999999999999999999999985
Q ss_pred hCCChhhHHHHHHHHHHHHHHHHHHHHHHhHHhhhcCC
Q 014481 367 LSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGV 404 (423)
Q Consensus 367 ~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~r~~ 404 (423)
|+|+.++|.+.+...+..++..+....+.+|...+|.
T Consensus 239 -G~sa~~aG~llsl~~l~~~~~~ll~P~la~R~~n~r~ 275 (395)
T COG2807 239 -GLSAAEAGSLLSLMQLAQLPTALLIPLLARRSKNQRP 275 (395)
T ss_pred -CCCHHHhhhHHHHHHHHHHHHHHHHHHHHHHhcccch
Confidence 9999999999999999999999999999999665544
No 84
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=99.88 E-value=3.3e-21 Score=188.66 Aligned_cols=285 Identities=18% Similarity=0.200 Sum_probs=201.0
Q ss_pred HHHHHHHHHhh--hhhhhhhHHHhhhhhC-----CCc--chhhHHHHHHHHHHHhhhhhhhhHhhHhcCchHHHHHHHHH
Q 014481 119 TSLAFVICNMD--KVNLSVAIIPMSHRFG-----WNS--SVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIW 189 (423)
Q Consensus 119 ~~~~~~~~~~~--~~~~~~~~~~~~~~~~-----~s~--~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~ 189 (423)
..+..+....+ .....+....+.++.. .+. .+.+|+.++..++..+++++.|+++|++|||+.++++.+++
T Consensus 50 ~~~~~~~fg~~g~~g~~s~~~~~~~~~~~~~~~~~~~~~~~~s~~~s~~~lga~~g~l~~g~l~d~~GRk~~l~~~~~~~ 129 (513)
T KOG0254|consen 50 AALGGLLFGYDGDIGGISGALDFLQRFASLYDLSTGEYSVRQGLLTSILNLGALVGSLLAGRLGDRIGRKKTLLLAVVLF 129 (513)
T ss_pred HHHHHHHhCcccccccchhhHHHHHhcccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHH
Confidence 33334443433 3445555555555321 122 34589999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhhHHHHHHHHHHHHHhhcccchHhHHHHHHhcCCCCchhhHHHHHHhhhhhHHHHHHhhHHHhhhc-cCc
Q 014481 190 SLATALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIEN-LGW 268 (423)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~-~gw 268 (423)
.++.++. +.+++++.++++|++.|+|.|+.......+++|..|++.||...+..+....+|..++..++....+. .+|
T Consensus 130 ~iG~ii~-~~a~~~~~l~~GR~l~G~g~G~~~~~~piy~sEiap~~~RG~l~~~~~l~~~~Gi~~~~~~~~~~~~~~~~W 208 (513)
T KOG0254|consen 130 LIGAIII-ALAPSWYQLIVGRILTGLGVGGASVLAPVYISEIAPAHIRGTLVSLYQLFITIGILLGYCINYGTSKVYAGW 208 (513)
T ss_pred HHHHHHH-HHhhhHHHHHHHHHHhccchhhhhhcchhhHhhcCChhhhHHHHHHHHHHHHHHHHHHHHHhhhhccCCccH
Confidence 9999888 57778899999999999999999999999999999999999999999999999999995555544332 489
Q ss_pred hHHHHHHHHHHHHHHHHHHhhccCCcCcCCCCCcchhhhhhhh-------hhhhhH--------HhhccccCCCcHHHhh
Q 014481 269 ESVFYIFGLLGIAWFSGFKILQEGETSNGATLAPRSNYINMKK-------SLSASL--------EEMGESLKDVPWKAIF 333 (423)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~--------~~~~~~~~~~~~~~~~ 333 (423)
|..+.+..+.+++..+..+++||+++...+..+.++....... ....+. .+.........+++++
T Consensus 209 r~~~~~~~i~~~~~~~~~~~~pesp~~L~~~g~~~~a~~~l~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 288 (513)
T KOG0254|consen 209 RIPLGLALIPAVILALGMLFLPESPRWLIEKGRLEEAKRSLKRLRGLSPEDVEVELELLKIKLLVEAEVAEGKASWGELF 288 (513)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCChHHHHHcCChHHHHHHHHHHhCCCCcchHHHHHHHHHHHHHhhhcccccccHHHhc
Confidence 9999999999888877788888887654443222221111000 000000 0011111111234443
Q ss_pred h----cHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHhhCCChhhHHHHHHHHHHHHHHHHHHHHHHhHHhhhcCCcc
Q 014481 334 R----SKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVET 406 (423)
Q Consensus 334 ~----~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~r~~~~ 406 (423)
+ ++.++...+..+.+..+.+...+|.+.+++. .|.+... .....+.++..+++.+++.++.||+|||+...
T Consensus 289 ~~~~~~~~~i~~~l~~fqq~tG~~~~~~Y~~~if~~-~g~~~~~-~~~~~~~~~v~~~~t~~~~~lvd~~gRr~lll 363 (513)
T KOG0254|consen 289 SPKVRKRLIIGLLLQLFQQLTGINYVFYYSTTIFKS-AGLKSDT-FLASIILGVVNFLGTLVATYLVDRFGRRKLLL 363 (513)
T ss_pred CcchHHHHHHHHHHHHHHHHhCCceEEeehHHHHHh-cCCCCch-HHHHHHHHHHHHHHHHHHHHHHHHhccHHHHH
Confidence 3 2334445556666666677777888888875 4766443 55667777888888888999999999885433
No 85
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=99.88 E-value=3.2e-20 Score=179.47 Aligned_cols=289 Identities=13% Similarity=0.111 Sum_probs=199.8
Q ss_pred HHHHHHHHHHHHHHhhhhhhhhhHHHhh-hh--hCCCcchhhHHHHHHHHHHHhhhhhhhhHhhH-hcCchHHHHHHHHH
Q 014481 114 KLIGTTSLAFVICNMDKVNLSVAIIPMS-HR--FGWNSSVAGLVQSSFFWGYALSQLPGGWLAKI-FGGRKVLQTGVLIW 189 (423)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~--~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr-~G~r~~~~~~~~~~ 189 (423)
+.+..+.+..+...+..+...+.+|.+. ++ +|++..+.+++.+.+.++..++++++|+++|| +|||+++.++.++.
T Consensus 10 ~~~~~l~~~~~~~~~~~~~~~~~L~~yl~~~~~lg~s~~~ag~~~~~~~~~~~~~~~~~G~laDr~~G~~~~l~~~~~~~ 89 (475)
T TIGR00924 10 KPLFTLFFVELWERFSYYGMQGILAVYLVQQAGLGFSQEQAFIIFGAYSALVYLLTSVGWWFGDRVWGTKKTMVLGGIVL 89 (475)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHhhcchHHHHHHHHHHH
Confidence 3344555666666777777777777754 44 89999999999999999999999999999999 89999999999999
Q ss_pred HHHHHHHHHhhhHHHHHHHHHHHHHhhcccchHhHHHHHHhcCCCCc---hhhHHHHHHhhhhhHHHHHHhhHHHhhhcc
Q 014481 190 SLATALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEE---RSRAVSFVFGGLSFGSVAGLLLAPPIIENL 266 (423)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~---r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~ 266 (423)
+++.++++ .+++++.+++.+++.|+|.|...+...+++++++|+++ |++++++++.+.++|.++||++++++.+..
T Consensus 90 ~~g~~~~~-~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~niG~~ig~~l~g~l~~~~ 168 (475)
T TIGR00924 90 MLGHFMLA-MSIYPDLIFYGLGTIAVGSGLFKANPSSMVGKLYERGDMPRRDGGFTLFYMSINIGSFISPLLAGVIAENY 168 (475)
T ss_pred HHHHHHHH-hcccHhHHHHHHHHHHhccccccCCHHHHHHHhcCCCCcccccceehhHHHHHHHHHHHHHHHHHHHHHhc
Confidence 99887774 55566778889999999999999999999999998754 888999999999999999999999999989
Q ss_pred CchHHHHHHHHHHHHHHHHHHhhccCCcCcC---CCCCcchhhhhhh-h---------------hhhhhHH---------
Q 014481 267 GWESVFYIFGLLGIAWFSGFKILQEGETSNG---ATLAPRSNYINMK-K---------------SLSASLE--------- 318 (423)
Q Consensus 267 gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~-~---------------~~~~~~~--------- 318 (423)
||++.|++.++..++..+.+++.++..++.. .+..+++...... . ..+....
T Consensus 169 g~~~~f~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (475)
T TIGR00924 169 GYHVGFNLAAVGMVIGLLTFFAGRHMLRDIGSVPDPLSGQGKTYGKLLLALLAALALVFFCAWLMHHVVIANILLMTVTL 248 (475)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHcccccccCCCCCCCcchhhhhhHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHH
Confidence 9999999988665555444444333221111 1000000000000 0 0000000
Q ss_pred ------hhccccCCCcHHHhhhcHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHhhCCChh----hHHHHHHHHHHHHHHH
Q 014481 319 ------EMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLT----EAAWVSILPPLASVLV 388 (423)
Q Consensus 319 ------~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~s~~----~~~~~~~~~~~~~~~~ 388 (423)
......+.....+-.|...+..+.+..++....+....+.++.+..+..+.+.. ..+++.++..+..++.
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~Q~~s~l~l~~~~~~~~~~~~~~ip~~~~~~~n~~~iil~ 328 (475)
T TIGR00924 249 AVIIFFFRLAFKPRLDAVARNKMYAYIVLFLEAVVFWVLYAQMPTSLNFFADNNMHHEMLGMSVPVIWFQSLNPFWVVVG 328 (475)
T ss_pred HHHHHHHHHHHhccCCHHHHhHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHhccccccceEECHHHHHhhhHHHHHHH
Confidence 000000011111112223445555566666777777778888888765444322 2668888888888888
Q ss_pred HHHHHHHhHHhhhcC
Q 014481 389 TSIAAQFADNLIATG 403 (423)
Q Consensus 389 ~~~~g~l~dr~~~r~ 403 (423)
.++..++..++.+|+
T Consensus 329 ~p~~~~~~~~l~~~~ 343 (475)
T TIGR00924 329 SPVLAMIWTRLGRKG 343 (475)
T ss_pred HHHHHHHHHHHHhCC
Confidence 888777777777653
No 86
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.88 E-value=5e-21 Score=179.56 Aligned_cols=254 Identities=18% Similarity=0.219 Sum_probs=193.8
Q ss_pred hhHHHHHHHHHHHhhhhhhhhHhhHhcCchHHHHHHHHHHHHHHHH--HHhhhHHHHHHHHHHHHHhhcccchHhHHHHH
Q 014481 151 AGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALL--PLLAGFMPGLVLSRVLVGIGEGVSPSAATDLI 228 (423)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~i 228 (423)
.+.+.+++.+|.++|+++.|+++||+|||..+.++.++..++.++. +...+++..++++|++.|+..|.......-++
T Consensus 62 wS~~vs~f~iG~~~Gs~~~~~la~~~GRK~~l~~~~~l~~~~~~~~~~s~~~~~~e~li~GR~i~Gl~~gl~~~~~pmyl 141 (485)
T KOG0569|consen 62 WSLIVSIFFIGGMIGSFSSGLLADRFGRKNALLLSNLLAVLAALLMGLSKSAPSFEMLILGRLIVGLACGLSTGLVPMYL 141 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHhHHHHHHHHHHH
Confidence 5677889999999999999999999999999999877766665544 34457788999999999999999999999999
Q ss_pred HhcCCCCchhhHHHHHHhhhhhHHHHHHhhHHH-hh-hccCchHHHHHHHHHHHHHHHHHHhhccCCcCcCCCCCc-chh
Q 014481 229 ARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPP-II-ENLGWESVFYIFGLLGIAWFSGFKILQEGETSNGATLAP-RSN 305 (423)
Q Consensus 229 ~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~-l~-~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 305 (423)
.|..|.+.||......+.+..+|.++|..++.- +. +...|++.+....+++++.++...++||+|+..-.+..+ ++.
T Consensus 142 ~E~sP~~~RG~~g~~~~~~~~~g~ll~~~~~l~~ilGt~~~W~~l~~~~~i~~~~~l~~l~~~PESPk~Ll~~k~~~~~A 221 (485)
T KOG0569|consen 142 TEISPKNLRGALGTLLQIGVVIGILLGQVLGLPSLLGTEDLWPYLLAFPLIPALLQLALLPFLPESPKYLLIKKGDEEEA 221 (485)
T ss_pred hhcChhhhccHHHHHHHHHHHHHHHHHHHHccHHhcCCCcchHHHHHHHHHHHHHHHHHHhcCCCCcchHHHHcCCHHHH
Confidence 999999999999999999999999999777643 33 445699999999999999999999999999875442222 221
Q ss_pred hhhhh-----h-------hhhhh-HHhhccccCCCcHHHhhhcHHHHHH-----HHHHHHHHHHHHHHHhhhhHHHHHhh
Q 014481 306 YINMK-----K-------SLSAS-LEEMGESLKDVPWKAIFRSKAVWAM-----IYAHFCGSWGHYTCLSWLPTYFSEEL 367 (423)
Q Consensus 306 ~~~~~-----~-------~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~-----~l~~~~~~~~~~~~~~~~~~~~~~~~ 367 (423)
.+..+ + ....+ .++..++.+..+++++++|+....- .+..+.+.-+.+....|...++++ .
T Consensus 222 ~~sl~~y~G~~~~~~~~e~~~~e~~~~~~~~~~~~sl~~~~~~~~lR~~~~i~~~v~~~qq~sGi~ai~~Yst~i~~~-a 300 (485)
T KOG0569|consen 222 RKALKFYRGKEDVEAEIEEMLREIEEEELEKKKQISLRQLLKNPTLRRPLLIGIVVSFAQQFSGINAIFFYSTSIFKT-A 300 (485)
T ss_pred HHHHHHHhCCCcchhHHHHHHHHHHHhccccccCCcHHHHhcCcchhHHHHHHHHHHHHHHhcCcceeHHHHHHHHHH-c
Confidence 11110 0 00111 1111222366778899988655433 223333334455566666677765 6
Q ss_pred CCChhhHHHHHHHHHHHHHHHHHHHHHHhHHhhhcCCc
Q 014481 368 SLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVE 405 (423)
Q Consensus 368 g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~r~~~ 405 (423)
|++..++.+.....++..++..+++.++.||+|||...
T Consensus 301 G~~~~~a~~an~~~g~v~~~~t~~~~~lid~~gRRpLl 338 (485)
T KOG0569|consen 301 GFTPEEAQYANLGIGIVNLLSTLVSPFLIDRLGRRPLL 338 (485)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcHHH
Confidence 99999999999999999999999999999999988543
No 87
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=99.87 E-value=2.2e-20 Score=180.30 Aligned_cols=272 Identities=18% Similarity=0.166 Sum_probs=214.9
Q ss_pred HHHHHHHHHHHHHHhhhhhhhhhHHHhhhhhCCCcchhhHHHHHHHHHHHhhhhhhhhHhhHhcCchHHHHHHHHHHHHH
Q 014481 114 KLIGTTSLAFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLAT 193 (423)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~ 193 (423)
+.+..++++.++..++..+....++.+..+..-|+..++++..+..+..++.++++|.++||+.||++++.+.++.++..
T Consensus 10 ~~Fr~lw~a~~iS~lG~~~~~va~~wlv~~lt~S~~~valv~~a~~LP~~Llsl~aG~laDr~drrrili~~~~~~~~~~ 89 (524)
T PF05977_consen 10 RNFRRLWIAQLISNLGDWMQTVALAWLVTQLTGSPLMVALVQAASTLPILLLSLFAGALADRFDRRRILILSQLLRALVA 89 (524)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHH
Confidence 34455677777888888888888888877888899999999999999999999999999999999999999988776655
Q ss_pred HHHHHhh----hHHHHHHHHHHHHHhhcccchHhHHHHHHhcCCCCchhhHHHHHHhhhhhHHHHHHhhHHHhhhccCch
Q 014481 194 ALLPLLA----GFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWE 269 (423)
Q Consensus 194 ~~~~~~~----~~~~~~~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~ 269 (423)
++++... .+.+.+++.-++.|++.+...|+..+++.+..|+++...+.++.+...+++.++||.++|.++...|-.
T Consensus 90 ~~L~~l~~~~~~~~~~Ll~~~fl~g~~~a~~~PA~~A~ip~lV~~~~L~~A~al~s~~~niar~iGPalgG~Lva~~G~~ 169 (524)
T PF05977_consen 90 LLLAVLAFFGLLSPWLLLILTFLLGIGSAFFNPAWQAIIPELVPKEDLPAANALNSISFNIARIIGPALGGILVAFFGAA 169 (524)
T ss_pred HHHHHHHHhCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHhhHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHH
Confidence 4443322 346788899999999999999999999999999999999999999999999999999999999988999
Q ss_pred HHHHHHHHHHHHHHHHHHhhccCCcCcCCCCCcchhhhhhhhhhhhhHHhhccccCCCcHHHhhhcHHHHHHHHHHHHHH
Q 014481 270 SVFYIFGLLGIAWFSGFKILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGS 349 (423)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 349 (423)
++|.+.++..++.++....++++.++... .++.. .+.. ...++.+.++|.+...++..++.+
T Consensus 170 ~~f~inalsfl~~i~~l~~~~~~~~~~~~---~~e~~---~~~l------------~~G~ryv~~~~~l~~~l~~~~~~~ 231 (524)
T PF05977_consen 170 AAFLINALSFLISILALLRWKPPPPPSSL---PRERF---FSAL------------REGLRYVRSSPPLRSVLLRSFLFN 231 (524)
T ss_pred HHHHHHHHHHHHHHHHHHHcccccccccc---chhhh---hhhH------------HHHHHHHhcchHHHHHHHHHHHHH
Confidence 99999888776655544444332221111 11100 0000 012456667777776666666666
Q ss_pred HHHHHHHhhhhHHHHHhhCCChhhHHHHHHHHHHHHHHHHHHHHHHhHHhhhcC
Q 014481 350 WGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATG 403 (423)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~r~ 403 (423)
+....+...+|.+.++.+|.++...|++.+..++|+++|.++.+++.+|+++++
T Consensus 232 l~~~a~~aLlPl~a~~~l~~~a~~yGll~a~~gvGai~Gal~~~~l~~~~~~~~ 285 (524)
T PF05977_consen 232 LFASAVWALLPLFARDVLGGGASGYGLLLAAFGVGAILGALLLPRLRRRLSSRR 285 (524)
T ss_pred HhhhHHHHhhhHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhcccCcch
Confidence 655666778999999999999999999999999999999999999988877654
No 88
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=99.87 E-value=4.4e-20 Score=177.62 Aligned_cols=282 Identities=17% Similarity=0.170 Sum_probs=200.2
Q ss_pred HHHHHHHHHhhhhhhhhhHHHhhhhhCCCcchhhHHHHHHHHHHHhhhhhhhhHhhHhcCchHHHHHHHHHHHHHHHHHH
Q 014481 119 TSLAFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPL 198 (423)
Q Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~ 198 (423)
+++.....++........++.+..++|-+ ....|+.+...++..++.++.|+++|.||||..++.+.++..++.++. .
T Consensus 49 ~~~~~~~~~~~~~~~a~~l~~I~~diG~~-~~~~w~~~~~~l~~av~~~~~G~LSDlfGRr~~~i~g~~l~vvG~Iv~-a 126 (599)
T PF06609_consen 49 FSLAVIAAYFVLVLPASILPYINADIGGS-DNWSWFSTAWTLASAVSFPFVGRLSDLFGRRYFFIIGSLLGVVGSIVC-A 126 (599)
T ss_pred HHHHHHHHHHHHhccHHHHHHHHHhcCCC-ccchHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHhHHHHh-h
Confidence 33334444555556667788899999954 677899999999999999999999999999999999999999999887 5
Q ss_pred hhhHHHHHHHHHHHHHhhcccchHhHHHHHHhcCCCCchhhHHHHHHhhhhhHHHHHHhhHHHhhhccCchHHHHHHHHH
Q 014481 199 LAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLL 278 (423)
Q Consensus 199 ~~~~~~~~~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~~~~~~~~ 278 (423)
.+++...++++..+.|+|.|... .....++|..|.|.|....++..........+++.++..+..+.+|||.|++.++.
T Consensus 127 tA~~~~~~iag~~l~GvgaG~~~-~~~~~isEl~p~k~R~~~~~~~~~~~i~~~~~~~~ia~~~~~~~~WRw~~~~~~i~ 205 (599)
T PF06609_consen 127 TAQNMNTFIAGMVLYGVGAGVQE-LAALAISELVPNKWRGLGLAIASIPFIITTWISPLIAQLFAAHSGWRWIFYIFIIW 205 (599)
T ss_pred cCCcHHHHHHHHHHHHHhhHHHH-HHHHHHHHhcccchhhhHhHHHHHHHHhhhcccHHHHHHhccCCCcchHHHHHHHH
Confidence 78888999999999999976665 45666899999999998888877776666778888888777777999999999888
Q ss_pred HHHHHHHHHhhccCCcCcC--CC-CCcchhhhhhhh---------------------h----hhhh--------------
Q 014481 279 GIAWFSGFKILQEGETSNG--AT-LAPRSNYINMKK---------------------S----LSAS-------------- 316 (423)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~--~~-~~~~~~~~~~~~---------------------~----~~~~-------------- 316 (423)
..+.++..+++-.++++.. .+ ...++...+.+- . ..+.
T Consensus 206 ~~i~~vl~~~fY~PP~~~~~~~~~~s~~~~l~~lD~IG~~L~~~Gl~LfLlgl~wgG~~~~~W~Sa~VIa~lviG~~~Lv 285 (599)
T PF06609_consen 206 SGIALVLIFFFYFPPPRAQLHGRKLSKREQLKELDWIGIFLFIAGLALFLLGLSWGGYPYYPWKSAHVIAPLVIGFVLLV 285 (599)
T ss_pred HHHHHHHHHHHhCCCchhhhccccCcHHHHHHHhhHHHHHHHHHHHHHHHHHHhccCCCCCCCCCccchhhHHHHHHHHH
Confidence 7665443333322222211 11 111111111100 0 0000
Q ss_pred ---HHhhcc--ccCCCcHHHhhhc-HHHHHHHHHHHHHHHHHHHHHhhhhHHHHHhhCCChh---hHHHHHHHHHHHHHH
Q 014481 317 ---LEEMGE--SLKDVPWKAIFRS-KAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLT---EAAWVSILPPLASVL 387 (423)
Q Consensus 317 ---~~~~~~--~~~~~~~~~~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~s~~---~~~~~~~~~~~~~~~ 387 (423)
.-|... +.+-.| .+++|+ |.+...++..++....++....+.|......++-++. ..++.....+.+..+
T Consensus 286 ~F~~wE~~~~~~~Pl~P-~~Lf~~~r~~~~~lvi~fi~G~~~~s~~~l~p~~~~~vf~~d~~~~~~~~~~s~~~~fg~~~ 364 (599)
T PF06609_consen 286 AFVVWEWFGAPKDPLFP-HRLFKDRRGFAALLVISFISGMNFFSVNILWPQQVVNVFGSDPISITEIGWISSPVGFGSCA 364 (599)
T ss_pred HHHHhhhhccCCCCcCC-HHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCcccceeehhhhhHHHHHHH
Confidence 001111 111122 467887 5566666677777777888888888888877776653 567788888999999
Q ss_pred HHHHHHHHhHHhhhcCC
Q 014481 388 VTSIAAQFADNLIATGV 404 (423)
Q Consensus 388 ~~~~~g~l~dr~~~r~~ 404 (423)
|.++.|.+..++++-|+
T Consensus 365 g~~i~g~l~~~ir~~Kw 381 (599)
T PF06609_consen 365 GAVILGLLFSKIRHIKW 381 (599)
T ss_pred HHHHHHHHHHHccchhH
Confidence 99999999998875544
No 89
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=99.87 E-value=6.8e-20 Score=173.76 Aligned_cols=266 Identities=11% Similarity=0.037 Sum_probs=200.2
Q ss_pred HHHHHHHHHHHHhhhhhhhhhHHHhhhhhCCCcchhhHHH--HHHHHHHHhhhhhh-hhHhhHhcCchHHHHHHHHHHH-
Q 014481 116 IGTTSLAFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQ--SSFFWGYALSQLPG-GWLAKIFGGRKVLQTGVLIWSL- 191 (423)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~--~~~~~~~~~~~~~~-g~l~dr~G~r~~~~~~~~~~~~- 191 (423)
+..+...++.+++......+.+|.+.++.|.+.+++|++. ++..+...+.++++ ++..||+||||.+++...+...
T Consensus 3 ~~~~~~ly~~~g~~~~~~~p~lp~~l~~~g~~~~~iGl~~~~~l~~~~~~l~~p~~~~~~~~~~g~r~~~i~~~~~~~~~ 82 (390)
T TIGR02718 3 VITLGLLYLSQGIPIGLAMDALPTLLREDGAPLTALAFLPLVGLPWVVKFLWAPLVDNWWSWRLGRRRSWVLPMQCLVSA 82 (390)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhccccccCCcchhHHHHHHHHHHH
Confidence 4566777888899999999999999999999999999974 56677887888888 4479999999997666533222
Q ss_pred HHHHHHH--hh-hHHHHHHHHHHHHHhhcccchHhHHHHHHhcCCCCchhhHHHHHHhhhhhHHHHHHhhHHHhhhccCc
Q 014481 192 ATALLPL--LA-GFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGW 268 (423)
Q Consensus 192 ~~~~~~~--~~-~~~~~~~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw 268 (423)
....... .. .....++...++.++..+...+...++..+..++++++.+.+....+..+|.++|+...+++.+..||
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~d~~~d~~~~~~~~~~~~~~~~~~~~~g~~lG~~~g~~~~~~l~~~~gw 162 (390)
T TIGR02718 83 CLASLALVGPDVAGAGWAVGLLACASLASATQDIATDGMAAEHFNGRTLAKGNAVQIAGVMIGFFGGGAGTLVLFGKFGQ 162 (390)
T ss_pred HHHHHHcCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCH
Confidence 1222211 12 22233444555566777778888888888988888888888889888899999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHhhccCCcCcCCCCCcchhhhhhhhhhhhhHHhhccccCCCcHHHhhhcHHHHHHHHHHHHH
Q 014481 269 ESVFYIFGLLGIAWFSGFKILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCG 348 (423)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 348 (423)
|..|++.+++.++..+..++++++++++.+ .+.+ +..++++++|+|.++...+..++.
T Consensus 163 ~~~f~~~a~l~~~~~~~~~~~~~~~~~~~~---~~~~-------------------~~~~~~~~l~~~~~~~~~~~~~l~ 220 (390)
T TIGR02718 163 RPAFLLVACVPLASLVCVLWLKDRAVASPE---APLA-------------------RRASLFRFFRRPLAWSLLALALLS 220 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCCcCccc---cchh-------------------hHHHHHHHHcCcCHHHHHHHHHHH
Confidence 999999998887765555555443321110 0000 001256788999888888888888
Q ss_pred HHHHHHHHhhhhHHHHHhhCCChhhHHHHHHHHHH-HHHHHHHHHHHHhHHhhhcCC
Q 014481 349 SWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPL-ASVLVTSIAAQFADNLIATGV 404 (423)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~-~~~~~~~~~g~l~dr~~~r~~ 404 (423)
.........+.+.|+++ .|+++.+.+.+....++ ..+++.++.|++.||+++|+.
T Consensus 221 ~~~~~~~~~~~~~~l~~-~G~s~~~ig~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~ 276 (390)
T TIGR02718 221 AMTAVSGFGLSKLYLVD-AGWPLEWIGRLGMAGGAVTVLLGCGGGAWLVRRAGLWRT 276 (390)
T ss_pred HHHHHHHHHHhhHHHHh-cCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhHHHH
Confidence 88788888899999987 69999999998887764 667788999999999998854
No 90
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=99.85 E-value=6.6e-20 Score=161.93 Aligned_cols=251 Identities=15% Similarity=0.060 Sum_probs=170.0
Q ss_pred hhhCCCcchhhHHHHHHHHHHHhhhhhhhhHhhHhcCchHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhhcccch
Q 014481 142 HRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPLLAGFMPGLVLSRVLVGIGEGVSP 221 (423)
Q Consensus 142 ~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~ 221 (423)
+..+.+..-.|.+.+.+.++.++.++.+|.++||+|||+++.++....++...+. +.++++..+++.|++.|+..+-.
T Consensus 61 ~~~~~~~~yaGflGSsF~ilQ~~sS~~~G~~SD~yGRkpvll~c~~~va~s~ll~-~~S~~F~afv~aR~l~Gi~kgnl- 138 (451)
T KOG2615|consen 61 EPDGASVFYAGFLGSSFSILQFISSPLWGCLSDRYGRKPVLLACLIGVALSYLLW-ALSRNFAAFVLARFLGGIFKGNL- 138 (451)
T ss_pred CcccccchhhhhHhhHHHHHHHHhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHhhhhccCch-
Confidence 3334455667999999999999999999999999999999999999999977776 68888877777799999997655
Q ss_pred HhHHHHHHhcCCCCchhhHHHHHHhhhhhHHHHHHhhHHHhhh---ccCchH-HH--HHHHHHHHH-HHHHHHhhccCCc
Q 014481 222 SAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIE---NLGWES-VF--YIFGLLGIA-WFSGFKILQEGET 294 (423)
Q Consensus 222 ~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~---~~gw~~-~~--~~~~~~~~~-~~~~~~~~~~~~~ 294 (423)
.+..++++|++++++|+.+++.+.+.+++|.++||.+||++.. ..|--+ ++ ++..+++.. .....+++||+-+
T Consensus 139 ~v~rAiisdV~sek~r~l~ms~v~~a~~lGfilGPmIGgyla~f~~~~g~~p~alP~~~v~i~a~~~v~~~~~~lpETL~ 218 (451)
T KOG2615|consen 139 SVIRAIISDVVSEKYRPLGMSLVGTAFGLGFILGPMIGGYLAQFSSISGSYPFALPCLLVFILAAGDVTFFPWFLPETLP 218 (451)
T ss_pred HHHHHHHHhhcChhhccceeeeeehhhhcchhhcchhhhHHHhhHhhhccCchHHHHHHHHHHHHHHHHHHHHhCCcccc
Confidence 7789999999999999999999999999999999999999987 333211 11 222222222 3445677788755
Q ss_pred CcCCCCCcchhhhhhhhhhhhhHHhhccccCCCcHHHhhhcHH-------HHHHHHHHHHHHHHHHHHHhhhhHHHHHhh
Q 014481 295 SNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKA-------VWAMIYAHFCGSWGHYTCLSWLPTYFSEEL 367 (423)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 367 (423)
.+++.....+ ..+...++ .+..+ ..+..-....+|+. ...+.+-.+++...+.+.......+....+
T Consensus 219 ~rk~~~~~~~----~~~~~~~~-~~~~~-~~~~~~v~~lrn~p~~~~i~~~~i~~l~~~ly~~l~s~~~~t~~~l~~~rf 292 (451)
T KOG2615|consen 219 LRKRNDEHST----LQEAADDR-LALLK-FARIFKVAALRNPPLLDFISVLRIFGLHYFLYLELFSGLENTVLFLTHGRF 292 (451)
T ss_pred chhhcccccc----hhhhhhhh-hhhcc-hhhhhhhhhhcCccccchHHHHHHHHHHHHHHHHHHHHHHhhHHHhhcCcc
Confidence 4433311100 00000000 00000 00000012233322 122344455555555555566666656779
Q ss_pred CCChhhHHHHHHHHHHHHHHHHHHHHHHhHHhh
Q 014481 368 SLNLTEAAWVSILPPLASVLVTSIAAQFADNLI 400 (423)
Q Consensus 368 g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~ 400 (423)
|+++.+.|.+++..++.+.+.+....+..+|..
T Consensus 293 g~ss~~~G~vl~~tGl~m~~~ql~~~~~l~~~~ 325 (451)
T KOG2615|consen 293 GYSSMQQGKVLSTTGLLMLVIQLALVPILPRYK 325 (451)
T ss_pred CCChhhheeeeehhhHHHHHHHHhccccccccc
Confidence 999999999999888888877777666666654
No 91
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.84 E-value=5.6e-19 Score=168.47 Aligned_cols=259 Identities=12% Similarity=0.006 Sum_probs=179.2
Q ss_pred HHHHHHHHHhhhhhhhhhHHH-hhhhhCCCcchhhHHHHHHHHHHHhhhhhhhhHhhHhcC-chHHHHHHHHHHHHHHHH
Q 014481 119 TSLAFVICNMDKVNLSVAIIP-MSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGG-RKVLQTGVLIWSLATALL 196 (423)
Q Consensus 119 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~-r~~~~~~~~~~~~~~~~~ 196 (423)
+.+.+++.+....+..+.++. +.+++|++..++|++.+++.++..++++++|+++||+|+ |+++.++.++.++...+.
T Consensus 7 ~~~~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~iGl~~a~~~~~~~i~~~~~g~l~dr~g~~r~~~~~~~~~~~~~~~~~ 86 (418)
T TIGR00889 7 LKFMSFLQWFIWGSWLVTLGSYMSKTLHFSGAEIGWVYSSTGIAAILMPILVGIIADKWLSAQKVYAVCHFAGALLLFFA 86 (418)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHH
Confidence 455566666667766555444 667899999999999999999999999999999999965 777787777776666565
Q ss_pred HHhhhHHHHHHHHHHHHHhhcccchHhHHHHHHhc--------CCCCchhhHHHHHHhhhhhHHHHHHhhHHHhhhccCc
Q 014481 197 PLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARS--------IPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGW 268 (423)
Q Consensus 197 ~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~i~~~--------~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw 268 (423)
...++++.+++.|++.|++.+...+...++...+ .....|.+.+| .+|.++||.+++.+....+|
T Consensus 87 -~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~g~~~~~~~~~~r~~G------~lG~~ig~~l~g~l~~~~~~ 159 (418)
T TIGR00889 87 -AQVTTPAGMFPVLLANSLAYMPTIALTNSISYANLPQAGLDVVTDFPPIRVMG------TIGFIAAMWAVSLLDIELSN 159 (418)
T ss_pred -HHhcCHHHHHHHHHHHHHHHccHHHHHHHHHHHHHhhcCCCchhcCCCeeeeh------hHHHHHHHHHHHHhcccchh
Confidence 4556778888899999998777777665553222 22223444444 47888999998887433335
Q ss_pred hHHHHHHHHHHHHHHHHHHhhccCCcCcCCCCCcchhhhhhhhhhhhhHHhhccccCCCcHHHhhhcHHHHHHHHHHHHH
Q 014481 269 ESVFYIFGLLGIAWFSGFKILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCG 348 (423)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 348 (423)
. .|++.+++.++..+..+.++|+++.++++. ... .+ ......++++|+|.++.+.+..++.
T Consensus 160 ~-~f~~~~~~~~~~~~~~~~~~e~~~~~~~~~---~~~---~~------------~~~~~~~~~~k~~~~~~~~~~~~~~ 220 (418)
T TIGR00889 160 I-QLYITAGSSALLGVFALTLPDIPVAKSTAK---MSI---KV------------MLGLDAFILFKNKRMAIFFFFSMLL 220 (418)
T ss_pred H-HHHHHHHHHHHHHHHHhcCCCCCCCccccc---cCH---HH------------HhhhhHHHHhcCCCeeeHHHHHHHH
Confidence 4 455666655555545556665532211110 000 00 0001235678889888887777777
Q ss_pred HHHHHHHHhhhhHHHHHhhCCCh--------hhHHHHHHHHHHHHHHHHHHHHHHhHHhhhcCC
Q 014481 349 SWGHYTCLSWLPTYFSEELSLNL--------TEAAWVSILPPLASVLVTSIAAQFADNLIATGV 404 (423)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~g~s~--------~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~r~~ 404 (423)
.........+++.|+++ .|.++ ...+...++..+..+++.++.|++.||+|+|+.
T Consensus 221 ~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~g~~~~~~~i~~i~~~~~~g~l~dr~g~r~~ 283 (418)
T TIGR00889 221 GAPLQITNIFGNGFLHE-FGRNPEFADSFVVKNASIWMSLSQFSEIFFILTIPFFLKRFGIKKV 283 (418)
T ss_pred HhHHHHHHHhHHHHHHH-hcccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHH
Confidence 66666667788888876 46554 556888899999999999999999999998854
No 92
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=99.83 E-value=2.7e-19 Score=176.07 Aligned_cols=255 Identities=17% Similarity=0.097 Sum_probs=185.6
Q ss_pred hhhhCCCcchhhHHHHHHHHHHHhhhhhhhhHhhHhcCchHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhhcccc
Q 014481 141 SHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPLLAGFMPGLVLSRVLVGIGEGVS 220 (423)
Q Consensus 141 ~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~ 220 (423)
.+.++.+.....+..+++.+|.++|++++|+++||+|||+++++++++..++.++. +++++++.++++|++.|++.++.
T Consensus 110 ~~~~c~~~~~~~~~~s~~~~G~~vG~~i~g~lsD~~GRk~~~~~~~~~~~i~~~~~-a~a~~~~~~~~~Rfl~G~~~~~~ 188 (521)
T KOG0255|consen 110 WNLVCDSSTLVALGQSLFFLGVLVGSLIFGPLSDRFGRKPVLLVSLLLFIIFGILT-AFAPNYWMFLIFRFLSGFFGSGP 188 (521)
T ss_pred hceeeCcHhHHHHHHHHHHHHHHHHHhhheehHhhcccHHHHHHHHHHHHHHHHHH-HHhCcHHHHHHHHHHHHhhccch
Confidence 35567788889999999999999999999999999999999999999999998666 78899999999999999999999
Q ss_pred hHhHHHHHHhcCCCCchhhHHHHHHhhhhhHHHHHHhhHHHhhhccCchHHHHHHHHHHHHHHHHHHhhccCCcCcCCCC
Q 014481 221 PSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAWFSGFKILQEGETSNGATL 300 (423)
Q Consensus 221 ~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (423)
......++.|++++++|+.+..+ ......++.+++++++++.. +||+.+++..++.++.++..++.+|+++....+.
T Consensus 189 ~~~~~~~~~E~~~~~~R~~~~~~-~~~~~~~~~~~~~~~a~~~~--~Wr~~~~~~~~~~~~~~~~~~l~~Es~rwl~~~g 265 (521)
T KOG0255|consen 189 LTVGFGLVAEIVSPKQRGLALTL-GGFFFVGGLMLPAGAAYITR--DWRWLFWIISIPSGLFLLLWFLPPESPRWLLSKG 265 (521)
T ss_pred hHHhHhhheeecCcchhhHHHHH-HHHHHHHHHHHHHHHHHHHh--hHHHHHHHHHHHHHHHHHHHHccCcChHHHHHcC
Confidence 99999999999999999999999 88888899999999999887 8999999999999887777666668776544433
Q ss_pred Ccchhhhhhhh---------hh----hhh--H--HhhccccCCCcHHHhhhcHHHHHHHHHHHHHHHHHHHHHhhhhHHH
Q 014481 301 APRSNYINMKK---------SL----SAS--L--EEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLSWLPTYF 363 (423)
Q Consensus 301 ~~~~~~~~~~~---------~~----~~~--~--~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 363 (423)
+.++.....++ .. ... . .......+...+.++++.|.+....+...+..+.......-++...
T Consensus 266 ~~~~a~~~l~~~a~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~y~gl~~~~ 345 (521)
T KOG0255|consen 266 RIDEAIKILKKIAKLNGRKLSVKELLRLELLLRPLKLLFTEPKISFLDLFRTPRLRYRTLYLLFIWFVFSLVYYGLSLNV 345 (521)
T ss_pred chHHHHHHHHHHHhhcCCCCCcHHHHHHHHHhhHhhhhccCCCCchhhhhcCHHHHHHHHHHHHHHHHHhHHHHhhhhhh
Confidence 32221111111 00 000 0 0111112334577888888655444444444433333333333333
Q ss_pred HHhhCCChhhHHHHHHHHHHHHHHHHHHHHHHhHHhhhcC
Q 014481 364 SEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATG 403 (423)
Q Consensus 364 ~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~r~ 403 (423)
. .+|.+.. ......+.....+....+...|++|||.
T Consensus 346 ~-~lg~~~~---~~~~~~~~~~~p~~~~~~~~~~~~gR~~ 381 (521)
T KOG0255|consen 346 S-GLGGNIY---LNFTLSGLVELPAYFRNGLLLPEFGRRP 381 (521)
T ss_pred h-hcCchHH---HHHHHHHHHHhhHHHHHHHHHHHhCcHH
Confidence 3 2454432 3344444577778888889999998773
No 93
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=99.83 E-value=2.7e-19 Score=172.45 Aligned_cols=258 Identities=14% Similarity=0.123 Sum_probs=184.8
Q ss_pred Hhhhhhhhhh-HHHhhhhhCCCcchhhHHHHHHHHHHHhhhhhhhhHhhH----hcCch-HHHHHHHHHHHHHHHHHHhh
Q 014481 127 NMDKVNLSVA-IIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKI----FGGRK-VLQTGVLIWSLATALLPLLA 200 (423)
Q Consensus 127 ~~~~~~~~~~-~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr----~G~r~-~~~~~~~~~~~~~~~~~~~~ 200 (423)
.........+ .+.+.+++|+++.++|++.++..+..++..|+.|+++|| +|||| .++++....+++.+++....
T Consensus 12 ~~~~~~~~~~l~~~~~~~~g~s~~~~g~i~~~~~i~~~i~~p~~G~lsDr~~~r~Grrr~~i~~~~~~~~i~~~~~~~~~ 91 (437)
T TIGR00792 12 NFIFAIVSTYLLFFYTDVLGLSAAFVGTLFLVARILDAITDPIMGNIVDRTRTRWGKFRPWLLIGAIPFSIVLVLLFTTP 91 (437)
T ss_pred HHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHhccchheEeeecCCCCCCCcchhHHHhHHHHHHHHHHHHhCC
Confidence 3334444444 445777899999999999999999999999999999998 67755 56667777776666553222
Q ss_pred h-----HHHHHHHHHHHHHhhcccchHhHHHHHHhcC-CCCchhhHHHHHHhhhhhHHHHHHhhHHHhhh-------ccC
Q 014481 201 G-----FMPGLVLSRVLVGIGEGVSPSAATDLIARSI-PLEERSRAVSFVFGGLSFGSVAGLLLAPPIIE-------NLG 267 (423)
Q Consensus 201 ~-----~~~~~~~~~~l~G~~~~~~~~~~~~~i~~~~-~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~-------~~g 267 (423)
+ ....+++.+++.+++.+...++..++..+.. ++++|++..++.+.+..+|..+++.+.+.+.. ..+
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~R~~~~~~~~~~~~~g~~l~~~~~~~l~~~~~~~~~~~g 171 (437)
T TIGR00792 92 DFSATGKLVYAYITYILLGLFYSFVNIPYWSLVPAITLDPRERESLSTFRRFGATLGGLLVAVIVLPLVSYFGGGDDKFG 171 (437)
T ss_pred CCCcchHHHHHHHHHHHHHHHHHhhcccHhhCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccccc
Confidence 1 1355667788888888887777888888887 46889999999998888888887776655542 458
Q ss_pred chHHHHHHHHHHHHHHHHH-HhhccCCcCcCCCCCcchhhhhhhhhhhhhHHhhccccCCCcHHHhhhcHHHHHHHHHHH
Q 014481 268 WESVFYIFGLLGIAWFSGF-KILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHF 346 (423)
Q Consensus 268 w~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 346 (423)
|++.+++.+++.++..+.. +..+|+++....+ ++++ .. ....++.+++||.++..++..+
T Consensus 172 ~~~~~~i~~~l~~~~~~~~~~~~~e~~~~~~~~--~~~~-----~~------------~~~~~~~l~~~~~~~~~~~~~~ 232 (437)
T TIGR00792 172 WFMFALVLALIGVVSLIICFFGTKERYSEIPKN--IEKK-----LS------------LKQIFKALFKNDQLLILCLAYL 232 (437)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCEecCCCCCcc--cccC-----CC------------HHHHHHHHhCCHHHHHHHHHHH
Confidence 9999999888877665443 4444433111000 0000 00 0012567889999998888888
Q ss_pred HHHHHHHHHHhhhhHHHHHhhCCChhhHHHHHHHHHHHHHHHHHHHHHHhHHhhhcCC
Q 014481 347 CGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGV 404 (423)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~r~~ 404 (423)
+...+......+.+.|.+..++ ++...+.+.....++.+++.++.+++.||+|+|+.
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~g~~~~ 289 (437)
T TIGR00792 233 FYNLAFNIKNGVQVYYFTYVLG-DPELFSYMGSIAIVAGLIGVLLFPRLVKKFGRKIL 289 (437)
T ss_pred HHHHHHHHHcchhheeEeeecC-ChHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHH
Confidence 8877777766666667665555 45566777778889999999999999999998744
No 94
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=99.83 E-value=1.2e-18 Score=153.13 Aligned_cols=188 Identities=18% Similarity=0.168 Sum_probs=162.7
Q ss_pred chhHHHHHHHHHHHHHHHhhhhhhhhhHHHhhhhhCCCcchhhHHHHHHHHHHHhhhhhhhhHhhHhcCchHHHHHHHHH
Q 014481 110 PQRYKLIGTTSLAFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIW 189 (423)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~ 189 (423)
+.+|........+.....+.....+.+.|.+.+.+|.+..+..++......+..+++..+|.++|++|||+.+.+..+..
T Consensus 74 rfq~yl~~~ag~gwmad~m~~m~~s~i~~~l~~~w~~s~~q~~llt~~v~~gmllga~~w~l~~d~~grr~~f~~T~l~t 153 (528)
T KOG0253|consen 74 RFQWYLFFVAGMGWMADAMEMMLLSLILPALDEVWGPSEGQAPLLTLSVFLGMLVGAMVWGLSADTIGRRKGFNLTFLVT 153 (528)
T ss_pred cchhhHHHHhhhHHHHHHHHHHHHHHHHHHHHhhhchhhhhhhHHHHHHHhhhhhhhhhhheehhhhhcchhhhhhHHHH
Confidence 34567777777777777777777777788899999999999999999999999999999999999999999999998887
Q ss_pred HHHHHHHHHhhhHHHHHHHHHHHHHhhcccchHhHHHHHHhcCCCCchhhHHHHHHhhhhhHHHHHHhhHHHhhhccCch
Q 014481 190 SLATALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWE 269 (423)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~ 269 (423)
++...+- ..++++..+++.|.+.|+|.|+ .|...++-.|..|..+|..-+-.. ..+.+|.++...++-.++..+|||
T Consensus 154 ~v~~~is-~~spnf~~L~~f~~l~~~g~gg-~pv~~~~yle~lp~~~r~~~~V~~-~~waig~v~ea~law~vm~~~gwr 230 (528)
T KOG0253|consen 154 GVFGVIS-GASPNFASLCVFRALWGFGVGG-LPVDSAIYLEFLPSSHRWLLTVMS-FFWAIGQVFEALLAWGVMSNFGWR 230 (528)
T ss_pred HHHHHhh-cCCCCeehhhHHHHHHhccCCC-ccHhHHHHHHhccCcCCCcchhHH-HHHHHHHHHHHHHHHHHHHhhhHH
Confidence 7776665 5778889999999999999999 899999999999988888877766 899999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhhccCCcCcCCCC
Q 014481 270 SVFYIFGLLGIAWFSGFKILQEGETSNGATL 300 (423)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (423)
|..........+.+...+.++|+++....+.
T Consensus 231 ~~l~~~~~pl~~~a~f~~w~~ESpRf~~~~G 261 (528)
T KOG0253|consen 231 YLLFTSSTPLMFAARFLVWVYESPRFYLAKG 261 (528)
T ss_pred HHHHHHHhHHHHHHHHHhhcccCcchhhhcC
Confidence 9998888888888888888999887654443
No 95
>PTZ00207 hypothetical protein; Provisional
Probab=99.82 E-value=2.5e-18 Score=166.60 Aligned_cols=288 Identities=11% Similarity=0.111 Sum_probs=199.3
Q ss_pred hHHHHHHHHHHHHHHHhhhhhhhhhHHHhhhhhCCCcchhhHHHHHHHHHHHhhhhhhhhHhhHhcCchHHHHHHHHHHH
Q 014481 112 RYKLIGTTSLAFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSL 191 (423)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~ 191 (423)
||..+......... ....+.++.+.+.+.+++|++..+++++.++. ....+++++.|++.||+|+|++++++.+++++
T Consensus 26 Rw~~lva~~~~~~~-~g~~y~fsv~s~~L~~~lgls~~~l~~i~svg-~~~g~~~lp~G~L~Dr~G~R~vllig~ll~~i 103 (591)
T PTZ00207 26 RFALLVLGAFCSIC-TSFMYAFNLISGAMQARYNLTQRDLSTITTVG-IAVGYFLLPYSFIYDYLGPRPIFVLSMTVFCL 103 (591)
T ss_pred hHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHhCcCHHHHHHHHHHH-HHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHH
Confidence 55554444433333 33345666778889999999999999998874 34556778899999999999999999999999
Q ss_pred HHHHHHHhh-----hHHHHHHHHHHHHHhhcccchHhHHHHHHhcCCCCchhhHHHHHHhhhhhHHHHHHhhHHHhhhcc
Q 014481 192 ATALLPLLA-----GFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENL 266 (423)
Q Consensus 192 ~~~~~~~~~-----~~~~~~~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~ 266 (423)
+.++++... .+++.+++.|++.|+|.+...+.....+.+|+| ++||++.|+...+.++|..+.+.+...+.. .
T Consensus 104 G~ll~ala~~~~i~~s~~~l~l~r~l~G~G~~~~~~~~~~~i~~~Fp-~~RG~a~Gi~~~~~gLGsaI~~~l~~~l~~-~ 181 (591)
T PTZ00207 104 GTLLFALTFQEVIEGSVVRLSVYNGLMTLGCMLFDLGAVVTVLSVFP-SNRGAVVAIMKTFTGLGSAILGSIQLAFFS-D 181 (591)
T ss_pred HHHHHHHHhcccccCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCh-hhhHHHHHHHHHHHHHHHHHHHHHHHHHHH-H
Confidence 998875431 478899999999999999888999999999997 889999999999999999864444444433 3
Q ss_pred CchHHHHHHHHHHHHHHHHHHhhccCCcCcCC--CC---Ccchhh--h--------------hh----------------
Q 014481 267 GWESVFYIFGLLGIAWFSGFKILQEGETSNGA--TL---APRSNY--I--------------NM---------------- 309 (423)
Q Consensus 267 gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~---~~~~~~--~--------------~~---------------- 309 (423)
+|++.|++.+++.++..++...+.+.++.... ++ .++++. . ..
T Consensus 182 ~~~~~fl~l~vl~~vv~ll~~~~vr~p~~~~~~~~~~~~~~~~~~~~~~~~~~y~~q~~p~~~f~~~~~i~~~l~~yl~~ 261 (591)
T PTZ00207 182 NTSAYFFFLMSFALVVGILAIVFMRLPPFHLTGYQEKHLDEEEKAQRLMRKGVYLKQKAPMWRFVYGFVILIILIVFLPL 261 (591)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhheeCCcchhhcccccCCCHHHHHHHhhhhhhhhhcCCCceehhhHHHHHHHHHHHHHH
Confidence 68888998888887665444443333321110 00 000000 0 00
Q ss_pred --------h--h---------hh---------------------h-h-h--H------------Hhh---c---c---cc
Q 014481 310 --------K--K---------SL---------------------S-A-S--L------------EEM---G---E---SL 324 (423)
Q Consensus 310 --------~--~---------~~---------------------~-~-~--~------------~~~---~---~---~~ 324 (423)
. + .. . + + . .+. . + +.
T Consensus 262 ~~~~~~~~~~~~~~~~~~~~v~~~lll~~p~l~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~ 341 (591)
T PTZ00207 262 QGALVAYLKLGSNFKVGFAVTVIVLTVIFPFMAFPLTTFDGKRPHDDSDGKAKEHVEAGEEVSAAEDKVVETDVDYIAPQ 341 (591)
T ss_pred HHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHhhhHHHhccCCcCCCccccccccccccccccccccccccccccCCCCC
Confidence 0 0 00 0 0 0 0 000 0 0 01
Q ss_pred CCCcHHHhhhcHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHhhCCChhh--HHHHHHHHHHHHHHHHHHHHHHhHHhhhc
Q 014481 325 KDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTE--AAWVSILPPLASVLVTSIAAQFADNLIAT 402 (423)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~--~~~~~~~~~~~~~~~~~~~g~l~dr~~~r 402 (423)
...++.+.+++..+|++.+..++...........+.++.+..-|.+... ...+.++.++++.+|++..|.+.....+|
T Consensus 342 ~~~t~~q~l~~~d~Wll~~~~~cg~g~gl~~~~N~~qI~~sl~g~~~~~~~~~~~vsL~si~~~~GRl~~g~~~~~~~~~ 421 (591)
T PTZ00207 342 FQETFIEGLKTARLWCLLWSIFCCVGAHFVIIFNARFIYTALAGEAPDDALNTLLTVLNGVGSAVGRLCMSYFEIWSQKR 421 (591)
T ss_pred CcchHHHHHhchhHHHHHHHHHHhhCchheeeecHHHHHHHhcCCCCCccceeeehhhhhHHHHhhHHHHHHHHHHHHhh
Confidence 1126778888999999999999998888888888888887632763333 33378899999999999999998444444
Q ss_pred C
Q 014481 403 G 403 (423)
Q Consensus 403 ~ 403 (423)
+
T Consensus 422 ~ 422 (591)
T PTZ00207 422 R 422 (591)
T ss_pred c
Confidence 3
No 96
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=99.81 E-value=1.5e-17 Score=161.86 Aligned_cols=168 Identities=15% Similarity=0.204 Sum_probs=134.9
Q ss_pred HHHHHHHHHHHHhhhhhhhhhHHH-hhhhhCCCcchhhHHHHHHHHHHHhhhhhhhhHhhH-hcCchHHHHHHHHHHHHH
Q 014481 116 IGTTSLAFVICNMDKVNLSVAIIP-MSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKI-FGGRKVLQTGVLIWSLAT 193 (423)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr-~G~r~~~~~~~~~~~~~~ 193 (423)
+..+++..+...+..+.....++. +.+++|++..+.+++.+.+........+++|+++|| +|||++++++.++.+++.
T Consensus 23 ~~~~~~~~~~~~~~~y~~~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~~~~G~LaDr~~G~r~~~~~g~~~~~ig~ 102 (500)
T PRK09584 23 FYLIFSIELWERFGYYGLQGIMAVYLVKQLGMSEADSITLFSSFSALVYGLVAIGGWLGDKVLGTKRVIMLGAIVLAIGY 102 (500)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHH
Confidence 334445555555565555555555 568899999999998888777766777899999999 599999999999999888
Q ss_pred HHHHHhhhHHHHHHHHHHHHHhhcccchHhHHHHHHhcCCCCc--hhhHHHHHHhhhhhHHHHHHhhHHHhhhccCchHH
Q 014481 194 ALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEE--RSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESV 271 (423)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~--r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~ 271 (423)
+++....++.+.+++.+++.|++.|...+...+++++++|+++ |+.++++++.+.++|..+||.+++++.+..|||+.
T Consensus 103 ~l~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~l~~~~f~~~~~~~~~~~~~~~~~~~iG~~~gp~i~g~l~~~~g~~~~ 182 (500)
T PRK09584 103 ALVAWSGHDAGIVYMGMATIAVGNGLFKANPSSLLSTCYEKDDPRLDGAFTMYYMSINIGSFFSMLATPWLAAKYGWSVA 182 (500)
T ss_pred HHHHHhcccHHHHHHHHHHHHHhhhcccCCHHHHHHHhcCCCchhhhhcchHHHHHHHHHHHHHHHHHHHHHHhhCHHHH
Confidence 7775433455667788999999999988999999999998643 45688999999999999999999999999999999
Q ss_pred HHHHHHHHHHHH
Q 014481 272 FYIFGLLGIAWF 283 (423)
Q Consensus 272 ~~~~~~~~~~~~ 283 (423)
|++.++..++.+
T Consensus 183 F~i~~i~~~i~~ 194 (500)
T PRK09584 183 FALSVVGMLITV 194 (500)
T ss_pred HHHHHHHHHHHH
Confidence 999876555443
No 97
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=99.80 E-value=7.1e-17 Score=154.11 Aligned_cols=173 Identities=17% Similarity=0.187 Sum_probs=134.2
Q ss_pred HHHHHHHHHHHHHHhhhhhhhhhHHH-hhhhhCCCcchhhHHHHHHHHHHHhhhhhhhhHhhHh-cCchHHHHHHHHHHH
Q 014481 114 KLIGTTSLAFVICNMDKVNLSVAIIP-MSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIF-GGRKVLQTGVLIWSL 191 (423)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-G~r~~~~~~~~~~~~ 191 (423)
+.+..++...+...+..+.+...+|. +.+++|++..+.+.+.+.+.....++++++|+++||+ |||++++++.++.++
T Consensus 9 ~~l~~l~~~~~~e~fs~Yg~~~~L~~yL~~~lgls~~~a~~i~~~~~~~~~l~~ligG~LaDRilGrrr~iliG~il~~l 88 (493)
T PRK15462 9 RAIYYVVALQIWEYFSFYGMRALLILYLTNQLKYDDNHAYELFSAYCSLVYVTPILGGFLADKVLGNRMAVMLGALLMAI 88 (493)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcHHHHHHHHHHHHH
Confidence 33444555555555666666666666 4667899999999999999999999999999999999 999999999999888
Q ss_pred HHHHHHHhhhHHHHHHHHHHHHHhhcccchHhHHHHHHhcCCCC--chhhHHHHHHhhhhhHHHHHHhhHHHhhhccCch
Q 014481 192 ATALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLE--ERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWE 269 (423)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~i~~~~~~~--~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~ 269 (423)
+.+++.....+...+.++..+.++|.|...+...++++|.+|++ +|.+++++.+.+.++|+.++|.+.+++.+..||+
T Consensus 89 g~lll~~~~~~~~~~~l~l~li~iG~G~~~~~~~alv~elfp~~~~~R~sgf~i~Y~~~nlG~~iap~l~g~L~~~~Gw~ 168 (493)
T PRK15462 89 GHVVLGASEIHPSFLYLSLAIIVCGYGLFKSNVSCLLGELYEPTDPRRDGGFSLMYAAGNVGSIIAPIACGYAQEEYSWA 168 (493)
T ss_pred HHHHHHHhhcchhHHHHHHHHHHHhcccccccHHHHHHHHCCCCCccccceehHHHHHHHHHHHHHHHHHHHHHhhhChH
Confidence 87665322222233444444555666777777889999999875 6999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHH
Q 014481 270 SVFYIFGLLGIAWFSGF 286 (423)
Q Consensus 270 ~~~~~~~~~~~~~~~~~ 286 (423)
+.|.+.++..++.++.+
T Consensus 169 ~~F~iaaigm~l~li~~ 185 (493)
T PRK15462 169 MGFGLAAVGMIAGLVIF 185 (493)
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 99998766544444433
No 98
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=99.80 E-value=1.4e-22 Score=196.08 Aligned_cols=282 Identities=19% Similarity=0.232 Sum_probs=194.7
Q ss_pred HHHHHHHhhhhhhhhhHHHhh--hhhCCC---------cchhhHHHHHHHHHHHhhhhhhhhHhhHhcCchHHHHHHHHH
Q 014481 121 LAFVICNMDKVNLSVAIIPMS--HRFGWN---------SSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIW 189 (423)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~~--~~~~~s---------~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~ 189 (423)
++.+..+++....+...+... .+++.+ ..+.+++.+...++..+|++++|.++||+|||+.++++.++.
T Consensus 7 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~G~~~~g~~~d~~GRk~~~~~~~~~~ 86 (451)
T PF00083_consen 7 LGGFLFGYDLGLIGSFASLLGFLQFFGWSSSESSCEKSSLLSSLLTSSFFIGAIVGALIFGFLADRYGRKPALIISALLM 86 (451)
T ss_pred HHHHHHHHHHHHHhhHHhhhhhhhccccccccccccchHHHHHHHHHHHHhhhccccccccccccccccccccccccccc
Confidence 444666666666655554433 222222 234688999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhh---HHHHHHHHHHHHHhhcccchHhHHHHHHhcCCCCchhhHHHHHHhhhhhHHHHHHhhHHHhhhcc
Q 014481 190 SLATALLPLLAG---FMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENL 266 (423)
Q Consensus 190 ~~~~~~~~~~~~---~~~~~~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~ 266 (423)
.++.++. .+++ +++.++++|++.|++.|+..+....++.|..|+++|++..++.+.+..+|.+++..++..+.+..
T Consensus 87 ~i~~~~~-~~~~~~~~~~~~~~~R~~~G~~~g~~~~~~~~~~~E~~~~~~R~~~~~~~~~~~~~G~~~~~~~~~~~~~~~ 165 (451)
T PF00083_consen 87 IIGSILI-AFAPSYNNFWMLLIGRFLIGFGIGGAYVVSPIYISEIAPPKHRGFLSSLFQLFWALGILLASLIGYIVSYYS 165 (451)
T ss_pred ccccccc-cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 9998877 4566 78999999999999999999999999999999999999999999999999999988876554433
Q ss_pred ---CchHHHHHHHHHHHHHHHHHHhhccCCcCcCCCCCcchhhhhhhh-----hhhhhHHhhcccc-----CCCcHHHhh
Q 014481 267 ---GWESVFYIFGLLGIAWFSGFKILQEGETSNGATLAPRSNYINMKK-----SLSASLEEMGESL-----KDVPWKAIF 333 (423)
Q Consensus 267 ---gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~-----~~~~~~~~~ 333 (423)
+||+.+++.+++.++.++..+++||+|+....+.+.++.+...++ ..+.+.++..++. .+..+++++
T Consensus 166 ~~~~Wr~~~~~~~~~~l~~~~~~~~~pESP~wL~~~~~~~~A~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 245 (451)
T PF00083_consen 166 DNWGWRILLIFGAIPSLLVLLLRFFLPESPRWLLSKGRDEEAEKVLRKLRGKEIEDEEIEEIKAEKKESQESKASWRDLF 245 (451)
T ss_pred ccccccccccccccccccccccccccccccceecccccccccccccccccccccccccccccccccccccccceeeeecc
Confidence 499999999999888777788999998765444433322211111 0111111111111 113466777
Q ss_pred hcHH----HHHHHHHHHHH-HHHHHHHHhhhhHHHHHhhCCChhhHHHHHHHHHHHHHHHHHHHHHHhHHhhhcCCcc
Q 014481 334 RSKA----VWAMIYAHFCG-SWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVET 406 (423)
Q Consensus 334 ~~~~----~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~r~~~~ 406 (423)
+++. +...+...++. ..+......+.+.++++ .|.+.. -.......+...++.+++.++.||+|||+...
T Consensus 246 ~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~i~~~-~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~GRr~~~i 320 (451)
T PF00083_consen 246 RNKKYRKRLLIALLLQFFQQFSGINFIFYYSPSIFEN-AGISNS--FLATLILGLVNFLGTLLAIFLIDRFGRRKLLI 320 (451)
T ss_pred ccccccccccccccccccccccccccccccccccccc-cccccc--cccccccccccccccccccccccccccccccc
Confidence 7643 22222222222 22333444555555544 576665 23344555667778888889999999996544
No 99
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=99.78 E-value=5.9e-17 Score=146.96 Aligned_cols=283 Identities=13% Similarity=0.126 Sum_probs=214.1
Q ss_pred CCCCCchhHHHHHHHHHHHHHHHhhhhhhhhhHHHhhhhhCCCcchhhHHHHHHHHHHHhhhhhhhhHhhHhcCchHHHH
Q 014481 105 PWKNIPQRYKLIGTTSLAFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQT 184 (423)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~ 184 (423)
..|..++||.+++.+.+..+.+.+.+..+++........|| +...+-|...+|++.+....+++-|+.|++|-|..+++
T Consensus 36 ~~rVy~rRW~vLl~~slL~~SN~~qWI~ya~i~n~~~~~Yg-s~~~~~wlsmIym~v~vp~gf~~mw~ldk~GLR~a~ll 114 (480)
T KOG2563|consen 36 GHRVYPRRWVVLLAFSLLNFSNGMQWIQYAPINNYVNSFYG-SSSAADWLSMIYMVVSVPFGFAAMWILDKFGLRTALLL 114 (480)
T ss_pred ccccchhHhHHHHHHHHHHhcCcchheeehhHHHHHHHHhc-chHHHHHHHHHHHHHHHHHhhHHHHhhcccchHHHHHH
Confidence 45677889999988888888888888888888888888889 77788899999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhh-----hHHH--HHHHHHHHHHhhcccchHhHHHHHHhcCCCCchhhHHHHHHhhhhhHHHHHHh
Q 014481 185 GVLIWSLATALLPLLA-----GFMP--GLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLL 257 (423)
Q Consensus 185 ~~~~~~~~~~~~~~~~-----~~~~--~~~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~ 257 (423)
+..+.+++..+-.... +.++ ....+..+.+.++.........+..-||++++|..+..+-..+..+|..+|.+
T Consensus 115 gt~ln~iGa~Ir~iss~p~v~~~f~~~l~~~Gq~iaa~Aq~Fim~lPskiA~~WF~~~qra~A~~~~v~~n~LGvavg~l 194 (480)
T KOG2563|consen 115 GTVLNGIGAWIRLISSLPFVPPLFRRPLTHTGQSIAAAAQPFILGLPSKIAAVWFPPDQRAIATVLGVMGNPLGVAVGFL 194 (480)
T ss_pred HHHHHHHHHHHhhhccCccccccchhhhhHHhHHHHHHhhhHhhccccHHHHhhCCcchhhhhhhHHHhcchHHHHHHhh
Confidence 9999999987653222 3344 67788889999888888887889999999999999999999999999999988
Q ss_pred hHHHhhhcc------CchH--HHHHHHHHHHHHHHHHHhhccCCcCcCCCCCcchhhhhhhhhhhhhHHhhccccCCCcH
Q 014481 258 LAPPIIENL------GWES--VFYIFGLLGIAWFSGFKILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPW 329 (423)
Q Consensus 258 ~~~~l~~~~------gw~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 329 (423)
+...+..+. .|.. .|+..+.++.+.+++..+...++++........... +..-....
T Consensus 195 lppilV~~~~~~~~~~~~~~~~f~~~~~l~~l~l~l~~~~~~~~P~tPps~s~~~~~---------------~~~f~~si 259 (480)
T KOG2563|consen 195 LPPILVPSSKDSEDNSWLFFTLFLGVECLAALLLALVLFVFTKKPPTPPSASQAALQ---------------DASFPKSI 259 (480)
T ss_pred ccceecCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCchhHhhhh---------------cCcHHHHH
Confidence 888877543 3443 244344444333333333333222211111000000 00011235
Q ss_pred HHhhhcHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHhhCCChhhHHHHHHHHHHHHHHHHHHHHHHhHHhhhcCC
Q 014481 330 KAIFRSKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGV 404 (423)
Q Consensus 330 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~r~~ 404 (423)
++.++|+.+..+.+.+......+++..+.+..-+.. -|++...+|+......+++++++++.|.+.||.+.-+.
T Consensus 260 ~~~~~n~~F~il~~~ygi~~g~F~~l~~~l~~~l~~-sgY~~~~aG~ig~l~iv~Gmlga~~~gii~Dktk~fk~ 333 (480)
T KOG2563|consen 260 KSCFKNRQFIILAICYGIGLGLFNSLSTLLNLALCP-SGYEGVFAGYIGALMIVAGMLGALASGIIADKTKKFKL 333 (480)
T ss_pred HHHHcCccHHHHHHHHhhhHHHHHHHHHHhhhcccc-ccCCccccchhHHHHHHHHHHHHHHHHhhhhhhhhHHH
Confidence 789999999999988888888888888777766654 48888899999999999999999999999999865433
No 100
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.77 E-value=4.5e-18 Score=164.77 Aligned_cols=289 Identities=16% Similarity=0.174 Sum_probs=225.6
Q ss_pred HHHHHHHHHHHHHHhhhhhhhhhHHHhhhhhCCCcchhhHHHHHHHHHHHhhhhhhhhHhhHhcCchHHHHHHHHHHHHH
Q 014481 114 KLIGTTSLAFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLAT 193 (423)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~ 193 (423)
..+.++.+..+...+....+...+..+.+.|+++.++.|++.+.+-++..+...+..+..-|.-|-+++-+|.++++++.
T Consensus 97 ~fl~~l~~~~~~q~l~~~y~~s~IttiErRF~i~Ss~sG~I~s~~dig~~l~i~fVsYfG~r~HrPr~Ig~G~~~m~lgs 176 (735)
T KOG3626|consen 97 MFLVLLSLAAFAQGLYVGYFNSVITTIERRFKISSSQSGLIASSYDIGNLLLIIFVSYFGSRGHRPRWIGIGLVLMGLGS 176 (735)
T ss_pred hHHHHHHHHHHHHHhhhhhhhhhhhhhhhhcCCCCCcceeEeeecccchhhhhHhHHHhccccCccceeeechhHHHHHH
Confidence 45566677777777777778888999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhh----------------------------------------------------HHHHHHHHHHHHHhhcccch
Q 014481 194 ALLPLLAG----------------------------------------------------FMPGLVLSRVLVGIGEGVSP 221 (423)
Q Consensus 194 ~~~~~~~~----------------------------------------------------~~~~~~~~~~l~G~~~~~~~ 221 (423)
+++++- + .+..++++.++.|+|....+
T Consensus 177 ll~alP-Hf~~~~y~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llff~~q~l~GIG~Tpi~ 255 (735)
T KOG3626|consen 177 LLFALP-HFFSGPYEYELEVIKQSVENPSSSLSFCCCNKSTNLCRPSPENSKREKESTSYPFLLFFLGQLLLGIGATPIF 255 (735)
T ss_pred HHHhCh-HHhcCcchhhhhhhhccccCCccccchhhccCCccccCCCCCcccccccCCchhHHHHHHHHHHhhcCCCCCc
Confidence 887432 1 11256778899999999999
Q ss_pred HhHHHHHHhcCCCCchhhHHHHHHhhhhhHHHHHHhhHHHhhhcc------------------C-chHHHHHHHHHHHHH
Q 014481 222 SAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENL------------------G-WESVFYIFGLLGIAW 282 (423)
Q Consensus 222 ~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~------------------g-w~~~~~~~~~~~~~~ 282 (423)
+...+|+-|...+++-..++|++.....+|.++|-++++++.+.+ | |..-|++.+.+.++.
T Consensus 256 tlGisYiDDnvk~~~SplYlgi~~~~~~lGPaiGfllgS~~l~lYvD~~~~~~~it~~DPrWIGAWWlGFLi~g~~~~~~ 335 (735)
T KOG3626|consen 256 TLGISYIDDNVKKKNSPLYLGILYSMAILGPAIGFLLGSFCLKLYVDFGLSPIGITPTDPRWIGAWWLGFLICGALLLFS 335 (735)
T ss_pred cCCCccccccccccCCcHHHHHHHHHHHhhhHHHHHHHHHHHHeeeccccCCCCCCCCCcchhhHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999987421 2 666778888888888
Q ss_pred HHHHHhhccCCcCcCCCCCcchhhhhhhhhh-hhhHHhhcc--ccCCCcHHHhhhcHHHHHHHHHHHHHHHHHHHHHhhh
Q 014481 283 FSGFKILQEGETSNGATLAPRSNYINMKKSL-SASLEEMGE--SLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLSWL 359 (423)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 359 (423)
.+.++++|++.++..++...++......+.. ........+ ..-....+++++||.+...+++..+....+.++.+++
T Consensus 336 a~p~f~fPk~lp~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~ikdfp~s~~~ll~N~if~~~~l~~~~~~~~~~G~~tFl 415 (735)
T KOG3626|consen 336 AVPLFFFPKELPKSQKRKRARDLHVLKTESGGAKSDKTFGKKIKDFPKSIKRLLSNPIFMLVVLASVIESLAITGYITFL 415 (735)
T ss_pred HHHHHhCcccCccccccchhhhhcccccccccccCCcchhhhHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHhhHHHhh
Confidence 8888888887765443211111000000000 000000000 0011235788999999999999999999999999999
Q ss_pred hHHHHHhhCCChhhHHHHHHHHHH-HHHHHHHHHHHHhHHhhhcC
Q 014481 360 PTYFSEELSLNLTEAAWVSILPPL-ASVLVTSIAAQFADNLIATG 403 (423)
Q Consensus 360 ~~~~~~~~g~s~~~~~~~~~~~~~-~~~~~~~~~g~l~dr~~~r~ 403 (423)
|-|++++||.++..+..++...++ +..+|.+++|++++|+.-+.
T Consensus 416 PKyLE~Qfg~sas~An~l~G~i~vp~~~~Gi~lGG~iikkfkl~~ 460 (735)
T KOG3626|consen 416 PKYLETQFGISASLANILTGSIGVPAAAVGIFLGGLIIKKFKLSA 460 (735)
T ss_pred HHHHHHHcCCCHHHHHHHhhhhhhhhhhhhhhccceeeeeecccH
Confidence 999999999999999988866554 55678889999999987553
No 101
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=99.76 E-value=7.4e-19 Score=159.03 Aligned_cols=294 Identities=20% Similarity=0.246 Sum_probs=203.3
Q ss_pred hHHHHHHHHHHHHHHHhhhhhhhhhHHHhhhhh-C-------CCcchhhHHHHHHHHHHHhhhhhhhhHhhHhcCchHHH
Q 014481 112 RYKLIGTTSLAFVICNMDKVNLSVAIIPMSHRF-G-------WNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQ 183 (423)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-------~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~ 183 (423)
..+.+.+..++++....+...++...+.+...+ | .++...+.+..+..+|.++|++++|++.||+|||+++.
T Consensus 39 ~fk~i~iAG~GfftDsYDlF~I~lVt~il~~lY~~~~~~~g~~ps~i~~~Vn~~A~vGti~GQl~FG~lgD~~GRK~vYG 118 (538)
T KOG0252|consen 39 HFKAIIIAGMGFFTDSYDLFSISLVTKILGYLYYHGDESGGHYPSGVLALVNAAALVGTIFGQLFFGWLGDKFGRKKVYG 118 (538)
T ss_pred HHHHHHHhhhhhcccchhhhhHHHHHHHHHHHhcCCCCCCCcCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhcchhhhh
Confidence 445666777788888888888888877765443 2 44566788999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhh-------hHHHHHHHHHHHHHhhcccchHhHHHHHHhcCCCCchhhHHHHHHhhhhhHHHHHH
Q 014481 184 TGVLIWSLATALLPLLA-------GFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGL 256 (423)
Q Consensus 184 ~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~ 256 (423)
..++++.+++++++ ++ .-.+++.+.|++.|+|.|+-+|...+..+|....+.||...+.+....++|.+.|.
T Consensus 119 ~~liImIi~t~~~~-~s~~~~~~~~~m~~L~~~R~~LGiGIGGDYPlSAtI~SE~an~~~RGa~iaavFa~Qg~GilaG~ 197 (538)
T KOG0252|consen 119 KELIIMIICSALSG-LSVGTTSPLGVMMTLCFFRFLLGIGIGGDYPLSATIMSESANKKTRGAFIAAVFAMQGFGILAGG 197 (538)
T ss_pred HHHHHHHHHHHHhc-cCCCCCCCcchhhHHHHHHHHhhccccCCCcchHHHhhhhhhhccccceeEEEEEecchhHhhcc
Confidence 99999999987553 32 12467889999999999999999999999999999999999999888888888887
Q ss_pred hhHHHhhhc---------------cCchHHHHHHHHHHHHHHHHHHhhccCCcCcCCCCCc-chhhhhhhhhhhhhHH--
Q 014481 257 LLAPPIIEN---------------LGWESVFYIFGLLGIAWFSGFKILQEGETSNGATLAP-RSNYINMKKSLSASLE-- 318 (423)
Q Consensus 257 ~~~~~l~~~---------------~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~-- 318 (423)
+++-.+... .=||..+.+.++++++.+...+.+||++..+....++ +....+.++......+
T Consensus 198 ivt~Iv~~~fe~~~~~~~~~~~ld~vWRl~~glg~vpa~~~ly~Rl~M~Et~~Y~al~~~~~~~a~~d~~k~~~~~~~~~ 277 (538)
T KOG0252|consen 198 IVALIVSAIFEKIFNGPSTYPHLDGVWRIIFGLGAVPALLVLYFRLKMPETARYTALVSKKLKQAAGDMKKVLSVDIEAE 277 (538)
T ss_pred HHHHHHHHHHhccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHhhhcCCcchhHHHHhhcCHhhhhhccccccccccchh
Confidence 776655421 1299999888888888888888888887665211111 0000001110000000
Q ss_pred ---hhccccCC--C-cHHHhhhc---HHHHHHHHHHHHHHHHHHHHHhhhhHHHHHhhCCChhhHHH--------HHHH-
Q 014481 319 ---EMGESLKD--V-PWKAIFRS---KAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAW--------VSIL- 380 (423)
Q Consensus 319 ---~~~~~~~~--~-~~~~~~~~---~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~--------~~~~- 380 (423)
+...+.+. . .+...+.. +.+...+..+|+.-.+++....+...++.. .|+.+.+... ...+
T Consensus 278 ~~~~~~~~~~~~~~~~F~~~f~~~hg~~Llgt~~~WFllDiafy~~nL~~s~I~~~-ig~~~~~~~~~~~~~vA~~~~ii 356 (538)
T KOG0252|consen 278 STAESDVPPPSNSFGLFSRLFLRWHGKHLLGTAGTWFLLDIAFYGQNLFQSVIFSA-IGVIPSANTYHELFKVAEGNLII 356 (538)
T ss_pred hccccCCCCcccccchHHHHHHHHHHHHHHHHHHHHHhhhhhhhccccHHHHHHHh-hccCCCcchHHHHHHHHHHHHHH
Confidence 00001111 1 12233322 445566788888888989888888888874 5766544333 2222
Q ss_pred HHHHHHHHHHHHHHHhHHhhhcCCccc
Q 014481 381 PPLASVLVTSIAAQFADNLIATGVETT 407 (423)
Q Consensus 381 ~~~~~~~~~~~~g~l~dr~~~r~~~~~ 407 (423)
..++.+.|..+...++|++||+.....
T Consensus 357 a~~~~vPGyw~tv~~id~iGRk~iq~~ 383 (538)
T KOG0252|consen 357 AVCSTVPGYWFTVYFIDIIGRKYIQLM 383 (538)
T ss_pred HHHccCCceeEEEEEeehhhhHHHHHh
Confidence 223334466677788999999855443
No 102
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=99.76 E-value=5.6e-20 Score=178.11 Aligned_cols=289 Identities=16% Similarity=0.208 Sum_probs=3.0
Q ss_pred HHHHHHHHHHHhhhhhhhhhHHHhhhhhCCCcchhhHHHHHHHHHHHhhhhhhhhHhhHhcCchHHHHHHHHHHHHHHHH
Q 014481 117 GTTSLAFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALL 196 (423)
Q Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~ 196 (423)
+.+++..+++.+........+..+.++|+++.++.|++.+.+-++..+..++..++.+|..|-+++-+|.++++++.+++
T Consensus 6 ~~~~~~~~~q~~~~g~~~~~lttiErRF~l~S~~~G~i~s~~di~~~~~~~~vsy~g~~~hrprwig~g~~~~~~g~~l~ 85 (539)
T PF03137_consen 6 VFLCLLGLFQMMVSGYVNSSLTTIERRFGLSSSQSGLISSSYDIGSLVVVLFVSYFGGRGHRPRWIGIGALLMGLGSLLF 85 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCcceeeecHHHHHHHHHHH
Confidence 34455555556666777778889999999999999999999999999999999999999888889999999999988776
Q ss_pred HHhhh--------------------------------------------------HHHHHHHHHHHHHhhcccchHhHHH
Q 014481 197 PLLAG--------------------------------------------------FMPGLVLSRVLVGIGEGVSPSAATD 226 (423)
Q Consensus 197 ~~~~~--------------------------------------------------~~~~~~~~~~l~G~~~~~~~~~~~~ 226 (423)
+. ++ .+..++++.++.|+|.+..++...+
T Consensus 86 ~l-Phf~~~~y~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~gq~l~GiG~~pl~tLG~t 164 (539)
T PF03137_consen 86 AL-PHFLSGPYSYEEASNSNGNSSISSNLCDSSSSSQASSDCQDCCSSSSSSLSGYFYVFILGQLLIGIGATPLYTLGIT 164 (539)
T ss_dssp -------------------------------------------------------------------SSS----------
T ss_pred hc-cHhhcCCCccccccccccccccccccccccccccccCccccccccccccchHHHHHHHHHHHHHhccccCCccceee
Confidence 32 10 1245788999999999999999999
Q ss_pred HHHhcCCCCchhhHHHHHHhhhhhHHHHHHhhHHHhhhcc---------------------C-chHHHHHHHHHHHHHHH
Q 014481 227 LIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENL---------------------G-WESVFYIFGLLGIAWFS 284 (423)
Q Consensus 227 ~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~---------------------g-w~~~~~~~~~~~~~~~~ 284 (423)
|+-|..++++-+.++|++.....+|.++|.++++.+.+.+ | |..-|++.+++.++..+
T Consensus 165 YiDDnv~~~~splYiGi~~~~~~lGPa~Gf~lg~~~L~~yvD~~~~~~~~~~i~p~dp~WvGAWWLGfli~g~~~~l~ai 244 (539)
T PF03137_consen 165 YIDDNVSKKNSPLYIGILYAMSILGPALGFLLGSFCLRIYVDFPKVPPDGVGITPSDPRWVGAWWLGFLICGILLFLSAI 244 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred eeccccccccCccchhhhhHHhhccHHHHHHHHHHHHhceeCCccccccCCCCCCCCccHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999998876421 2 66667777777777777
Q ss_pred HHHhhccCCcCcCCCCCc-chhhhhhhhhhhhhHHhh--------ccccCCCcHHHhhhcHHHHHHHHHHHHHHHHHHHH
Q 014481 285 GFKILQEGETSNGATLAP-RSNYINMKKSLSASLEEM--------GESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTC 355 (423)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 355 (423)
.++++|+.-+...+..+. +.+.....+.......+. ..+.-....+++++||.+....++..+......++
T Consensus 245 pl~~FPk~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~df~~~l~~Ll~Np~f~~~~la~~~~~~~~~G~ 324 (539)
T PF03137_consen 245 PLFFFPKKLPGTSERQEEKESSERKEEDSDKDSFKDPKSKKSFGKSIKDFPKALKRLLTNPVFMCLILAGVFESFIVSGF 324 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHcCCccCCCcccccchhhhhhcchhhhhhhcccccccccchhhhhhhHHHHHHHHhcChHHHHHHHHHHHHHHHHHHH
Confidence 777888766554111111 000000000000000000 01112234678899999999999999999999999
Q ss_pred HhhhhHHHHHhhCCChhhHHHHHHHHHH-HHHHHHHHHHHHhHHhhhcCCcc
Q 014481 356 LSWLPTYFSEELSLNLTEAAWVSILPPL-ASVLVTSIAAQFADNLIATGVET 406 (423)
Q Consensus 356 ~~~~~~~~~~~~g~s~~~~~~~~~~~~~-~~~~~~~~~g~l~dr~~~r~~~~ 406 (423)
.++.|.|++.+++.++.+++++..+..+ ++++|.+++|++.+|++-+....
T Consensus 325 ~tF~pKylE~QF~~sas~A~~l~G~v~ip~~~~G~llGG~ivkk~kl~~~~~ 376 (539)
T PF03137_consen 325 ATFLPKYLESQFGLSASQASLLTGIVSIPGAALGILLGGYIVKKFKLSARGA 376 (539)
T ss_dssp ----------------------------------------------------
T ss_pred HHHHHHHHHHHhCCCHHHHHHHHhhhhcchhheehheEEEEEEEecCcHHHH
Confidence 9999999999999999999988766554 77789999999999987654433
No 103
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=99.76 E-value=1e-16 Score=152.46 Aligned_cols=276 Identities=12% Similarity=0.110 Sum_probs=182.6
Q ss_pred HHHHHHHHHHHHHHHhhhhhhhhhHHHhhhhhCCCcchhhHHHHHHHHHHHhhhhhhhhHhh----HhcCchHHHHH-HH
Q 014481 113 YKLIGTTSLAFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAK----IFGGRKVLQTG-VL 187 (423)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d----r~G~r~~~~~~-~~ 187 (423)
|+++. ++...+...+.+....+.++.+.+++|.+....+++..+..+...+.+|+.|+++| |+|||++++++ .+
T Consensus 4 ~~li~-~~~~~~Giq~~~~l~~~~l~~yl~~lg~~~~~~~~i~~~~~l~~~i~~Pi~G~lSDr~~sr~GRRrp~il~g~~ 82 (477)
T TIGR01301 4 RKLLR-VASVAAGVQFGWALQLSLLTPYVQELGIPHAWASIIWLCGPLSGLLVQPLVGYLSDRCTSRFGRRRPFIAAGAA 82 (477)
T ss_pred HHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhHeeehhcCCCCCCCChHHHHHHHHH
Confidence 34443 33333344556677777777788899999999999999999999999999999999 59999999886 44
Q ss_pred HHHHHHHHHHHhhhHH-----------------HHHHHHHHHHHhhcccchHhHHHHHHhcCCCCch--hhHHHHHHhhh
Q 014481 188 IWSLATALLPLLAGFM-----------------PGLVLSRVLVGIGEGVSPSAATDLIARSIPLEER--SRAVSFVFGGL 248 (423)
Q Consensus 188 ~~~~~~~~~~~~~~~~-----------------~~~~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r--~~~~~~~~~~~ 248 (423)
...++.++++ .+.+. +.++++..+..++.....++..++++|.+|+++| +.+.++.+.+.
T Consensus 83 ~~~~~l~ll~-~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~lld~~~n~~~~p~rALiaDl~p~~~~~~~~a~~~~~~~~ 161 (477)
T TIGR01301 83 LVAFAVILIG-FAADIGHLFGDNLDKKTKPRAIIVFVVGFWILDVANNMLQGPCRAFLADLTGGDARRTRIANAYFSFFM 161 (477)
T ss_pred HHHHHHHHHH-hCchhhhhccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCchhHHHHHHHHHHHHHH
Confidence 4444444442 32221 2233334445567777888889999999998765 68999999999
Q ss_pred hhHHHHHHhhHHHh--hhcc-------------CchHHHHHHHHHHHHHHHH-HHhhccCCcCcCCCCCcchhhhhhhhh
Q 014481 249 SFGSVAGLLLAPPI--IENL-------------GWESVFYIFGLLGIAWFSG-FKILQEGETSNGATLAPRSNYINMKKS 312 (423)
Q Consensus 249 ~~g~~~g~~~~~~l--~~~~-------------gw~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (423)
++|.++|+.+++.. .+.+ +.++.|++.+++.++..+. .+..+|.++....+..+++ . + +
T Consensus 162 ~lG~ilg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~F~i~a~~l~i~~l~t~~~v~E~~~~~~~~~~~~~-~-~--~- 236 (477)
T TIGR01301 162 AIGNVLGYAAGAYSGLYKIFPFTKTEACGVSCANLKSCFLIDIILLAILTYIALSAVKENPLIGSDDFINSE-A-A--P- 236 (477)
T ss_pred HHHHHHHHHHHHHHhHHHhcccccccccccccchHHHHHHHHHHHHHHHHHHHeeeeeccCCCccccchhhh-c-c--c-
Confidence 99999999999875 2211 5688899888877666444 4455565432211110000 0 0 0
Q ss_pred hhhhHHhhccccCCCcHHHhhh-----cHHHHHHHHHHHHHHHHHHHHHhhhhHHHHH-hhCCChh------h----HHH
Q 014481 313 LSASLEEMGESLKDVPWKAIFR-----SKAVWAMIYAHFCGSWGHYTCLSWLPTYFSE-ELSLNLT------E----AAW 376 (423)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-~~g~s~~------~----~~~ 376 (423)
..+......++++++ -|.++.+++..++.+++.+.+..|.+.|+.+ .++.++. + ..+
T Consensus 237 -------~~~~~~~~~~~~i~~~~~~mP~~m~~l~~vqffsW~a~f~~~~y~T~~vg~~v~~~~~~~~~~y~~gvr~G~~ 309 (477)
T TIGR01301 237 -------PSKHGEEAFFGELFGAFKYLPRPVWILLLVTCLNWIAWFPFILFDTDWMGREVYGGSVNQGAKYDDGVRAGAF 309 (477)
T ss_pred -------ccccchhhhHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHcCCCCcchhHHHHHHHHHHH
Confidence 000000112233333 2678999999999999999999999999874 4553321 1 123
Q ss_pred HHHHHHHHHHHHHHHHHHHhHHhhhc
Q 014481 377 VSILPPLASVLVTSIAAQFADNLIAT 402 (423)
Q Consensus 377 ~~~~~~~~~~~~~~~~g~l~dr~~~r 402 (423)
......+...+..++..++.+|+|+|
T Consensus 310 ~l~~~s~~~~i~s~~l~~l~~~~g~~ 335 (477)
T TIGR01301 310 GLMLNSVVLGITSIGMEKLCRGWGAG 335 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 44455556566777778888888753
No 104
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=99.73 E-value=1.3e-16 Score=153.98 Aligned_cols=283 Identities=13% Similarity=0.064 Sum_probs=185.4
Q ss_pred HHHHHHHHHHHHHHhhhhhhhhhHHHhhhhhCCCcchhhHHHHHHHHHHHhhhhhhhhHhhHhc-----CchHHHHHHHH
Q 014481 114 KLIGTTSLAFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFG-----GRKVLQTGVLI 188 (423)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G-----~r~~~~~~~~~ 188 (423)
..+.++...++..++.........+.+.+++|++.++++...++..+...+-.+ +|+++||++ ||+.++++.++
T Consensus 26 ~~~~~~~~~y~~qGl~~l~~~~~~~~l~~~lg~s~~~i~~~~sl~~lpw~~K~l-~g~l~D~~~i~G~rRr~~l~~~~~l 104 (468)
T TIGR00788 26 VVLAIGLQVLFVKGIAGLMRLPLSPMLTDDLGLDGARYQRLVGLSSLGWALKPF-AGVMSDTFPLFGYTKRWYLVLSGLL 104 (468)
T ss_pred hHHHHHHHHHHHhhHHHHhhhhhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHhcCCCCccchHHHHHHHHH
Confidence 445556666777777733444455667778999999999999999999988555 999999997 67777777666
Q ss_pred HH-HHHHHHHHhhhHHHHHHHHHHHHHhhcccchHhHHHHHHhcCCCCchhhH---HHHHHhhhhhHHHHHHhhHHHhhh
Q 014481 189 WS-LATALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRA---VSFVFGGLSFGSVAGLLLAPPIIE 264 (423)
Q Consensus 189 ~~-~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~---~~~~~~~~~~g~~~g~~~~~~l~~ 264 (423)
.+ +....++...++.....++.++.+++.+...++..+++.|..+ +++... .++.....++|.++|+.++|.+.+
T Consensus 105 ~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~a~~dv~~da~~~e~~~-~~~~~~~~~~s~~~~~~~~G~~vg~~l~G~l~~ 183 (468)
T TIGR00788 105 GSAILYGLLPGKVSSAKVAAAFIFLAALAKALYDVLVDSLYSERIR-ESPSAGPSLVSWMWGASATGGLISSLLGGPLLD 183 (468)
T ss_pred HHHHHHHhcccccchHHHHHHHHHHHHHHHHHHHHhHHHHHhhhhh-cCCCcCCCeeeHHHHHHHHHHHHHHHHHHHHHH
Confidence 52 3322222112333444457889999999999999999999998 554443 334444556899999999999999
Q ss_pred ccCchHHHHHHHHHHHHHHHHHHhhccCCcCcCCCCCcchh--hhhhhhhhhhhHHhhccccCCCcHHHhhhcHHHHHHH
Q 014481 265 NLGWESVFYIFGLLGIAWFSGFKILQEGETSNGATLAPRSN--YINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMI 342 (423)
Q Consensus 265 ~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (423)
..+|+..|++.+++.++..+..++++|+++....+..+++. .............+ .....++.+++|.++...
T Consensus 184 ~~~~~~~f~~~a~l~ll~~~~~~~~~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~l~~~l~~~~i~~~l 258 (468)
T TIGR00788 184 KTLTRILFLITAALLLLQLFVSNLSKERRAFVRPRIGTYLEMNMALLTLGVLANVKV-----QILGLRGAIQLLEIAKPL 258 (468)
T ss_pred hcCcchHHHHHHHHHHHHHHHHHhcccccccccccccccchhhhhhhhhhHHHHHHH-----HHHHHHHHHhcHHHHHHH
Confidence 99999999999888877766666777653211111000000 00000000000000 001234567888888766
Q ss_pred HHHHH-HHHHHHHHHhhhhHHHHHhhCCChhhHHHHHHHHHHHHHHHHHHHHHHhHHhhhcCC
Q 014481 343 YAHFC-GSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGV 404 (423)
Q Consensus 343 l~~~~-~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~r~~ 404 (423)
+..++ +.........++ .+..+..|+++...|.+....+++.+++..+.+++.+|++.|+.
T Consensus 259 ~fifl~~~~~~~~~~~~f-~~~~~~lG~s~~~~G~~~~~~~v~~i~g~~~~~~~~~~~~~r~~ 320 (468)
T TIGR00788 259 IFIFLSYANLPGASGSVF-CATTQCLPGGPSFSGMSKVVGNLGSLCGVGGYDRFLKTFPYRLL 320 (468)
T ss_pred HHHHHHHhhcCCCCceeE-EEEcccCCCCcchhhhHHHHHHHHHHHHHHHHHHHHhhCCHHHH
Confidence 65555 322222211111 13334579999999999999999999999999999988887743
No 105
>PRK09669 putative symporter YagG; Provisional
Probab=99.73 E-value=4.2e-16 Score=150.36 Aligned_cols=263 Identities=14% Similarity=0.069 Sum_probs=171.4
Q ss_pred HHHHHHHHHhhhhhhhhh-HHHhhhhhCCCcchhhHHHHHHHHHHHhhhhhhhhHhhH----hcCchH-HHHHHHHHHHH
Q 014481 119 TSLAFVICNMDKVNLSVA-IIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKI----FGGRKV-LQTGVLIWSLA 192 (423)
Q Consensus 119 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr----~G~r~~-~~~~~~~~~~~ 192 (423)
..++.+...........+ ...+.+.+|++...+|.+.++..+..++..|+.|+++|| +||||. ++++.+..++.
T Consensus 14 yg~g~~~~~~~~~~~~~~l~~~~t~~~gls~~~~g~i~~i~~i~dai~dp~~G~lsD~~~~r~Grrrp~il~~~~~~~i~ 93 (444)
T PRK09669 14 YGLGDTACNLVWQTVMLFLAYFYTDVFGLSAAIMGTMFLVVRVLDAVTDPLMGALVDRTRTRHGQFRPYLLWFAIPFGVV 93 (444)
T ss_pred hcchhhhhhHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHcccceeeEeeecCCCCCCCcchhHHHHHHHHHHH
Confidence 333433333333444444 445778899999999999999999999999999999999 777555 44566666666
Q ss_pred HHHHHHhh-----hHHHHHHHHHHHHHhhcccchHhHHHHHHhcC-CCCchhhHHHHHHhhhhhHHHHHHhhHHHhhh--
Q 014481 193 TALLPLLA-----GFMPGLVLSRVLVGIGEGVSPSAATDLIARSI-PLEERSRAVSFVFGGLSFGSVAGLLLAPPIIE-- 264 (423)
Q Consensus 193 ~~~~~~~~-----~~~~~~~~~~~l~G~~~~~~~~~~~~~i~~~~-~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~-- 264 (423)
.++..... .....+++..++.+.+.+....+..++.+|+. ++++|.+..++...+..+|..+++.+...+..
T Consensus 94 ~~l~f~~p~~~~~~~~~~~~~~~~l~~~~~t~~~ip~~al~~~~t~~~~eR~~l~~~r~~~~~~G~~i~~~~~~pl~~~~ 173 (444)
T PRK09669 94 CLLTFYTPDFGATGKIIYACVTYILLSLVYTAINVPYCAMPGAITNDPRERHSLQSWRFALSFIGGLIVSVIALPLVDIL 173 (444)
T ss_pred HHHHHhCCCCCcchHHHHHHHHHHHHHHHHHhhcchHHHhHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 54442221 12345555666667666677777788999988 45789998888888888888877765544332
Q ss_pred -----ccCchHHHHHHHHHHHHHHHHHHh-hccCCcCcCCCCCcchhhhhhhhhhhhhHHhhccccCCCcHHHhhhcHHH
Q 014481 265 -----NLGWESVFYIFGLLGIAWFSGFKI-LQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAV 338 (423)
Q Consensus 265 -----~~gw~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 338 (423)
..||+..+.+.+++.++..+..++ .+|...++ .+ ++ ... ...++.+++||.+
T Consensus 174 ~~~~~~~g~~~~~~i~~ii~~v~~~~~~~~~~e~~~~~-~~--~~---~~~----------------~~~~~~~~~n~~~ 231 (444)
T PRK09669 174 GKGDEQKGYFYAMMVMGLLGVVLFFCCFFMTKERYTPE-VD--NS---SSV----------------WKDLKLLLGNSQW 231 (444)
T ss_pred CCCchhhhHHHHHHHHHHHHHHHHHHHhCCeEEecCCC-Cc--CC---CCH----------------HHHHHHHhCCchH
Confidence 246888888877777665444333 33322111 00 00 000 0125678899999
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhHHHHHhhCCChhhHHHHHHHHHHHHHHHHHHHHHHhHHhhhcCC
Q 014481 339 WAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGV 404 (423)
Q Consensus 339 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~r~~ 404 (423)
+.+++..++............+.|.+...+ ++...+.+.....+..+++.++.+++.||+|+|+.
T Consensus 232 ~~l~~~~~~~~~~~~~~~~~~~y~~~~~~~-~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~gk~~~ 296 (444)
T PRK09669 232 RIMFIFNVVLLTAVVTRGGATLYYVNYVLL-RPDLATLFLVTGMIAGLFGALLSERLLGKFDRVRA 296 (444)
T ss_pred HHHHHHHHHHHHHHHHHhhhhheeeeeecC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHH
Confidence 888877776666665545544444443333 23334455556667888899999999999998754
No 106
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=99.73 E-value=1.8e-18 Score=146.71 Aligned_cols=273 Identities=13% Similarity=0.116 Sum_probs=200.2
Q ss_pred hhHHHHHHHHHHHHHHHhhhhhhhhhHHHhhhhhCCCcchhhHHHHHHHHHHHhhhhhhhhHhhH-hcCchHHHHHHHHH
Q 014481 111 QRYKLIGTTSLAFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKI-FGGRKVLQTGVLIW 189 (423)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr-~G~r~~~~~~~~~~ 189 (423)
+|...+..+++..+-.++..-..+.....+..+.+++.++..++.++|.....+...++|++.|| +|.|..-++-+...
T Consensus 41 hr~m~lv~mc~lgfgsyfcyd~p~alq~~fk~d~ni~~akftLlYsvYSwPNvVlcffgGflidr~fgir~gtii~~~fv 120 (459)
T KOG4686|consen 41 HRFMALVFMCLLGFGSYFCYDAPGALQIDFKLDSNIEYAKFTLLYSVYSWPNVVLCFFGGFLIDRRFGIRLGTIILCIFV 120 (459)
T ss_pred hHHHHHHHHHHhcccceeecCCchhhhhhhhcccccceeeeeeeeeeccCCCEEEeeecceeehhhhhhhHHHHHHHHHH
Confidence 34455666666666677777777777778888999999999999999999999999999999997 67777666666666
Q ss_pred HHHHHHHH--HhhhHHHHHHHHHHHHHhhcccchHhHHHHHHhcCCCCchhhHHHHHHhhhhhHHHHHHhhHHHhhhccC
Q 014481 190 SLATALLP--LLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLG 267 (423)
Q Consensus 190 ~~~~~~~~--~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g 267 (423)
.++.++++ ...+.+|.++++|++.|+|.-....+.+.++..||..|+.+.++|+......+|..+--.+.+++.+..+
T Consensus 121 ~~GqliFa~Ggi~~aFw~M~~GRF~FGIGgESlAVaQN~yav~wFKGKELn~vfGlqlSvAR~GstvNf~lm~~ly~~~~ 200 (459)
T KOG4686|consen 121 FLGQLIFAAGGISHAFWTMLAGRFLFGIGGESLAVAQNKYAVYWFKGKELNFVFGLQLSVARLGSTVNFLLMPFLYDTMG 200 (459)
T ss_pred HHHHHHHHhchHHHHHHHHHhhheeeccCchhhhhhhcceeEEEecCccccchhhHHHHHHHhhceeeeeecHHHHHHHH
Confidence 67766553 3567889999999999999888888899999999999999999999999999999998888888887532
Q ss_pred c------hHHHH---HHHHH----HHHHHHHHHhhccCCcCcCCCCCcchhhhhhhhhhhhhHHhhccccCCCcHHHhh-
Q 014481 268 W------ESVFY---IFGLL----GIAWFSGFKILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIF- 333 (423)
Q Consensus 268 w------~~~~~---~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 333 (423)
- +...- ..+.. .++.++..-+..+.. ++....+ +. ...+...+.++.
T Consensus 201 ~~~~~~ghT~LG~~l~~~~~tc~~slical~lg~~D~rA---erilh~e-------~g---------~~Ge~pkLtdv~~ 261 (459)
T KOG4686|consen 201 RMFPGVGHTLLGLWLCFEVKTCKQSLICALSLGLSDDRA---ERILHLE-------EG---------FLGEEPKLTDVNT 261 (459)
T ss_pred HhcccchHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHH---HHHHhhh-------cC---------cccCCcccccccc
Confidence 1 11110 01111 111111111111110 0000000 00 000000111111
Q ss_pred hcHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHhhCCChhhHHHHHHHHHHHHHHHHHHHHHHhHHhhhc
Q 014481 334 RSKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIAT 402 (423)
Q Consensus 334 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~r 402 (423)
-.|.+|.+....+++..+.+-+.+.-|.++++++|+|+..++.+.+.....+.+..++.|.++||+|++
T Consensus 262 f~ppfw~~~iicv~yyva~fPFi~lg~~fF~~rfGlS~~~a~~i~s~vy~Isav~spvfg~i~Dk~G~n 330 (459)
T KOG4686|consen 262 FYPPFWVLVIICVLYYVAWFPFITLGPMFFQKRFGLSAVSAGNILSTVYGISAVLSPVFGAISDKYGFN 330 (459)
T ss_pred cCccHHHHHHHHHHHHHHHHHHhhhhHHHHHHhhCCChhhccchhhhhhhhhhhhhhhHHHhHhhhcce
Confidence 237899999999999999999999999999999999999999999999999999999999999999987
No 107
>PRK10429 melibiose:sodium symporter; Provisional
Probab=99.72 E-value=7.3e-16 Score=149.64 Aligned_cols=267 Identities=12% Similarity=0.061 Sum_probs=177.6
Q ss_pred HHHHHHHHHhhhhhhhhhHHH-hhhhhCCCcchhhHHHHHHHHHHHhhhhhhhhHhh----HhcC-chHHHHHHHHHHHH
Q 014481 119 TSLAFVICNMDKVNLSVAIIP-MSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAK----IFGG-RKVLQTGVLIWSLA 192 (423)
Q Consensus 119 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d----r~G~-r~~~~~~~~~~~~~ 192 (423)
..++.+...+......++++. +.+.+|+++..+|.+..+..+..++..|+.|+++| |+|| |+.++++.+..+++
T Consensus 11 yg~g~~~~~~~~~~~~~~l~~yyt~v~Gls~~~vg~i~~i~ri~dai~dp~~G~lsD~t~sr~Grrrp~il~g~i~~~i~ 90 (473)
T PRK10429 11 YGFGAFGKDFAIGIVYMYLMYYYTDVVGLSVGLVGTLFLVARIWDAINDPIMGWIVNNTRSRWGKFKPWILIGTLANSVV 90 (473)
T ss_pred hccchhHHhHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhhchheeehhcCCCCCCCcchhHhhhhHHHHHH
Confidence 444555555555666665554 56667999999999999999999999999999999 5699 45555677776666
Q ss_pred HHHHHHhhh------HHHHHHHHHHHHHhhcccchHhHHHHHHhcC-CCCchhhHHHHHHhhhhhHHHHHHhhHHHhhh-
Q 014481 193 TALLPLLAG------FMPGLVLSRVLVGIGEGVSPSAATDLIARSI-PLEERSRAVSFVFGGLSFGSVAGLLLAPPIIE- 264 (423)
Q Consensus 193 ~~~~~~~~~------~~~~~~~~~~l~G~~~~~~~~~~~~~i~~~~-~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~- 264 (423)
.+++ +..+ .+..+++..++.+++......+..++..|.. ++++|.+..++-..+.++|+.+++.+...+.+
T Consensus 91 ~~ll-f~~p~~~~~~~~~~~~~~~~l~~~~~t~~~ip~~al~~~lt~~~~eR~~l~~~~~~~~~ig~~~~~~~~~~~~~~ 169 (473)
T PRK10429 91 LFLL-FSAHLFEGTAQYVFVCVTYILWGMTYTIMDIPFWSLVPTLTLDKREREQLVPYPRFFASLAGFVTAGFTLPFVNY 169 (473)
T ss_pred HHHH-HcCCCCCccHHHHHHHHHHHHHHHHHHHHcchHHhhhHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5554 3221 1234555666777888888888889999998 57899999998777777776666655443322
Q ss_pred ------ccCchHHHHHHHHHHHHHHHHHHh-hccCCcCcCCCCCcchhhhhhhhhhhhhHHhhccccCCCcHHHhhhcHH
Q 014481 265 ------NLGWESVFYIFGLLGIAWFSGFKI-LQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKA 337 (423)
Q Consensus 265 ------~~gw~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 337 (423)
..+|+...++.+++.++..+..++ .+|.+.....+.+++++ ... ...++.+++||.
T Consensus 170 ~g~~~~~~g~~~~~~i~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~-~~~----------------~~~~~~~~~n~~ 232 (473)
T PRK10429 170 VGGGDRGFGFQMFTLVLIAFFIVSTIITLRNVHEVYSSDNQVSAEGSH-LTL----------------KDIVALIYKNDQ 232 (473)
T ss_pred hCCCchhhhHHHHHHHHHHHHHHHHHHHHcCceecCCccccccccccC-CCH----------------HHHHHHHhcCHH
Confidence 125666666666665554433333 44432111100000000 000 012456678999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhHHHHHhhCCChhhHHHHHHHHHHHHHHHHHHHHHHhHHhhhcCC
Q 014481 338 VWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGV 404 (423)
Q Consensus 338 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~r~~ 404 (423)
++.+++..++..........+.+.|.+.. ..+....+.+.....++.+++.++.+++.||+|+|+.
T Consensus 233 ~~~ll~~~~~~~~~~~~~~~~~~y~~~y~-~~~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~gkk~~ 298 (473)
T PRK10429 233 LSCLLGMALAYNIASNIINGFAIYYFTYV-IGDADLFPYYLSYAGAANLVTLILFPRLVKSLSRRIL 298 (473)
T ss_pred HHHHHHHHHHHHHHHHHHhhheeeEEEEE-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHH
Confidence 98888888887777777767766666543 3345566667777778899999999999999998854
No 108
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=99.72 E-value=3.5e-15 Score=140.21 Aligned_cols=263 Identities=14% Similarity=0.105 Sum_probs=191.7
Q ss_pred HHHHHHHHHhhhhhhhhhHHHhhhhhCCCcchhhHHHHHHHHHHHhhhhhhhhHhhHhc-CchHHHHHHHHHHHHHHHHH
Q 014481 119 TSLAFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFG-GRKVLQTGVLIWSLATALLP 197 (423)
Q Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G-~r~~~~~~~~~~~~~~~~~~ 197 (423)
+...+++.+.....+.|.++.+.++.|+|..++|.+.+...+...++++++|.++||++ +|+.+.+..++.++.....
T Consensus 7 Ls~~~f~~f~~~G~~~p~~~~~L~~~G~s~~qIG~l~a~~~~~~i~~~~~~g~~aDr~~~~~~~l~~~~l~~~~~~~~~- 85 (400)
T PF03825_consen 7 LSLMYFLYFFAYGAFLPYLPLYLESRGFSGTQIGILLAVGPLARIVSPPFWGAIADRFGSAKRILALLSLLSALALLLL- 85 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhHHHHHHHHHHHHHHHHHHH-
Confidence 44455666677777888899999999999999999999999999999999999999986 4666666666655554444
Q ss_pred HhhhHHHHHHHHHHHHHhhcccchHhHHHHHHhcCCCCchhhHHHHHHhhhhhHHHHHHhh-HHHhhhccC---chHHHH
Q 014481 198 LLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLL-APPIIENLG---WESVFY 273 (423)
Q Consensus 198 ~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~-~~~l~~~~g---w~~~~~ 273 (423)
...++++.+++..++..+......|...++..+... +++.-+|-.....++|.+++... ++.+....+ ..+.++
T Consensus 86 ~~~~~f~~~~~~~~l~~~~~~p~~pl~dsi~~~~~~--~~~~~YG~iRlwGSiGf~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (400)
T PF03825_consen 86 AFSSSFWWLFVIMLLFSFFFSPTMPLSDSIALSYLG--DRGKDYGRIRLWGSIGFIVAALAFGGLLGGYLGISGTSLIFY 163 (400)
T ss_pred HHhccHHHHHHHHHHHHHHHccHHHHHHHHHHHHcc--cccCCCCcchhhhhHHHHHHHHHHHHHHHhhhccccccHHHH
Confidence 455667777778888888888888888888888875 45566777777777887777554 233333222 334566
Q ss_pred HHHHHHHHHHHHHHhhccCCcCcCCCCCcchhhhhhhhhhhhhHHhhccccCCCcHHHhhhcHHHHHHHHHHHHHHHHHH
Q 014481 274 IFGLLGIAWFSGFKILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHY 353 (423)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 353 (423)
+.++..++.....+.+|+.++++..+...++ ....+..+++|+|+++.+.+..++......
T Consensus 164 i~~~~~~ll~~~~l~lp~~~~~~~~~~~~~~-------------------~~~~~~~~llk~~~~~~Fll~~~l~~~~~~ 224 (400)
T PF03825_consen 164 IAAILSLLLAGFALFLPKTPPKRSAKESVKK-------------------LLGLDALKLLKNPRFLVFLLAAFLIGISHA 224 (400)
T ss_pred HHHHHHHHHHHHHHhCCCCccccccCCCccc-------------------ccchHHHHHhcCccHHHHHHHHHHHHHHHH
Confidence 6666555555555566665522211111000 000112478999999999999999999999
Q ss_pred HHHhhhhHHHHHhhCCChhhHHHHHHHHHHHHHHHHHHHHHHhHHhhhcC
Q 014481 354 TCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATG 403 (423)
Q Consensus 354 ~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~r~ 403 (423)
...++.+.|+++.-|.+....+.+.++..++.++.-.+.+++..|+|.++
T Consensus 225 ~~~~f~~~yl~~~gg~~~~~~g~~~~l~~~aEi~~f~~~~~~~~r~g~~~ 274 (400)
T PF03825_consen 225 AYYTFFSIYLQELGGYSGSTIGILWALGVVAEIPFFFFSGRFLKRFGIKW 274 (400)
T ss_pred HHHHHHHHHHHHcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHH
Confidence 99999999999853377788888888888999999999999999998773
No 109
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=99.71 E-value=2.3e-15 Score=138.92 Aligned_cols=273 Identities=13% Similarity=0.050 Sum_probs=178.0
Q ss_pred HHHHHHHHHHHHHHhhhhhhhhhHHHhhh-hhCCCcchhhHHHHHHHHHHHhhhhhhhhHhhHhcCchHHHHHHHHHHH-
Q 014481 114 KLIGTTSLAFVICNMDKVNLSVAIIPMSH-RFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSL- 191 (423)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~- 191 (423)
+....+...++..++..+...++.+...+ ..|++.+++|.+.++..+...+.+|+.|.++||+|.||-+++...+..+
T Consensus 7 ~~~~~~s~~~f~~Ff~~gi~~pF~~iWL~~~~GLs~~~iG~i~s~~~~~~l~~qp~~G~i~Dklg~kK~Ll~~i~~l~~l 86 (412)
T PF01306_consen 7 KNYWWLSLFYFFYFFIWGIFLPFFPIWLTQVAGLSGTEIGIIFSAGSLFALLAQPVYGFISDKLGLKKHLLWFIAILLLL 86 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHTHHHHHHHHHHCTTCSHHHHHHHHHHHT
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHccccCCCHHHHHHHHHHHHHHHHHHHHhHHHhcchhhhhHHHHHHHHHHHHH
Confidence 44555666666677778888888888554 5899999999999999999999999999999999988876654433222
Q ss_pred -HH-HHH---HHhhhHHH-HHHHHHHHHHhhcccchHhHHHHHHhcCCCCchhhHHHHHHhhhhhHHHHHHhhHHHhhhc
Q 014481 192 -AT-ALL---PLLAGFMP-GLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIEN 265 (423)
Q Consensus 192 -~~-~~~---~~~~~~~~-~~~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~ 265 (423)
+- ++. .....|.+ ..+++-+..|+......|+.-+++.++. ++.+.-+|-...++++|.+++..++|.+.+.
T Consensus 87 ~~pff~~v~~pll~~n~~lg~iig~i~l~~~f~~~~~~~Ea~~er~s--r~~~feYG~~R~wGSig~ai~s~~~G~L~~i 164 (412)
T PF01306_consen 87 FGPFFIYVFGPLLQSNFWLGAIIGGIYLGLVFNAGVPLSEAYAERVS--RRNGFEYGRARMWGSIGFAIASLLAGILFNI 164 (412)
T ss_dssp CHHHHHHTHHHHHHTT-HHHHHHTTTTTTTTTTTHHHHHHHHHHHHH--HHHSS-HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccchHHHHHHHHHH--HHhcCCcchHHHHhhHHHHHHHHHhheeeee
Confidence 11 111 11122322 2233334445555566666666666654 4566677888899999999999999999874
Q ss_pred cCchHHHHHHHHHHHHHHHHHHhhccCCcCcCCCCCcchhhhhhhhhhhhhHHhhccccCCCcHHHhhhcHHHHHHHHHH
Q 014481 266 LGWESVFYIFGLLGIAWFSGFKILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAH 345 (423)
Q Consensus 266 ~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 345 (423)
+-...||+....+++..++.+..+++.+++....+..+.+. + +.+.....+++|+|++|.+.+..
T Consensus 165 -~p~~~fwi~s~~~~il~lll~~~~~~~~~~~~~~~~~~~~~---~-----------~~~~~~~~~l~k~~~fw~~~l~v 229 (412)
T PF01306_consen 165 -NPNIIFWIASAAAIILLLLLLLLKPDVPPQAEVADALGAKK---D-----------KVSLKDVLSLFKMRNFWFFVLFV 229 (412)
T ss_dssp -HHHHHHHHHHHHHHHHHHHHHSS---SSSSS-SSTTSSS--------------------HHHHHHHTTSHHHHHHHHHH
T ss_pred -CccHHHHHHHHHHHHHHHHHHHcCCcCchhhhhhcccccCC---C-----------CCcHHHHHHHhcchhHHHHHHHH
Confidence 55778887766666555444444332222111111100000 0 00001246889999999998887
Q ss_pred HHHHHHHHHHHhhhhHHHHHhh---CCChhhHHHHHHHHHHHHHHHHHHHHHHhHHhhhcC
Q 014481 346 FCGSWGHYTCLSWLPTYFSEEL---SLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATG 403 (423)
Q Consensus 346 ~~~~~~~~~~~~~~~~~~~~~~---g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~r~ 403 (423)
......+..+...++.|....+ +.+....|++.+..-+..++.-.+..++.+|+|.|+
T Consensus 230 ~g~~~~Y~vfdqqf~~y~~~~f~~~~~g~~~~G~l~s~~v~~E~~~m~~~p~li~rig~k~ 290 (412)
T PF01306_consen 230 IGVAAIYDVFDQQFPIYFASFFQSAGQGNQMYGYLWSVQVFLEALMMFFSPWLINRIGAKN 290 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcccccChhHHhHHHHHHHHHHHHHHHHHHHHHHhcChHh
Confidence 7777777777777888877532 234456788888889999999999999999999884
No 110
>PF13347 MFS_2: MFS/sugar transport protein
Probab=99.71 E-value=4.1e-16 Score=149.63 Aligned_cols=256 Identities=18% Similarity=0.205 Sum_probs=189.8
Q ss_pred hhhhhhhhh-HHHhhhhhCCCcchhhHHHHHHHHHHHhhhhhhhhHhh----HhcCchHHH-HHHHHHHHHHHHHHHhhh
Q 014481 128 MDKVNLSVA-IIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAK----IFGGRKVLQ-TGVLIWSLATALLPLLAG 201 (423)
Q Consensus 128 ~~~~~~~~~-~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d----r~G~r~~~~-~~~~~~~~~~~~~~~~~~ 201 (423)
+........ .+.+.+.+|+++..+|++..+..+..++..|+.|.++| |+||||.++ ++.+..+++..++....+
T Consensus 15 ~~~~~~~~~~~~f~~~~~gl~~~~~g~i~~~~~i~dai~dp~~G~~sDr~~tr~Grrrp~~l~g~i~~~~~~~llf~~~p 94 (428)
T PF13347_consen 15 MIWSLLSSYLLYFYTDVLGLSPALAGLILLVGRIWDAITDPLIGYLSDRTRTRWGRRRPWILIGAILLALSFFLLFSPPP 94 (428)
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHhhhhcCCcEEEEEeeecccccccceEeehhhHHHHHHHHHhhcccc
Confidence 333333333 45577778999999999999999999999999999999 899877665 566777776666532212
Q ss_pred -------HHHHHHHHHHHHHhhcccchHhHHHHHHhcCC-CCchhhHHHHHHhhhhhHHHHHHhhHHHhhhcc-------
Q 014481 202 -------FMPGLVLSRVLVGIGEGVSPSAATDLIARSIP-LEERSRAVSFVFGGLSFGSVAGLLLAPPIIENL------- 266 (423)
Q Consensus 202 -------~~~~~~~~~~l~G~~~~~~~~~~~~~i~~~~~-~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~------- 266 (423)
....+.+..++..++......+..++.+|..+ +++|.+..++-..+..+|.++...+.+.+.+..
T Consensus 95 ~~~~~~~~~~~~~~~~~l~~~~~t~~~i~~~al~~~lt~~~~~R~~l~~~~~~~~~~g~~l~~~~~~~l~~~~g~~~~~~ 174 (428)
T PF13347_consen 95 AGLSFTAKLVWLFVFYILFDIAYTFVQIPYNALIPELTPDPDERTRLSSWRMIFSMIGSLLASFLAPILVSWFGGGDTSN 174 (428)
T ss_pred chhhhhhHHHHHHHHHHHHHHhhhhccCchhhcCccccccHhhhhhHHHHHHHHHHHHHHHHHHHhhhhhhhhccCccch
Confidence 12235666777789989999999999999997 568999999988888888876666666655322
Q ss_pred CchHHHHHHHHHHHHHHHHHHh-hccCCcCcCCCCCcchhhhhhhhhhhhhHHhhccccCCCcHHHhhhcHHHHHHHHHH
Q 014481 267 GWESVFYIFGLLGIAWFSGFKI-LQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAH 345 (423)
Q Consensus 267 gw~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 345 (423)
+|++..++.+++.++..+...+ .+|+++....+ ++ +..-...++.+++||.++.+.+..
T Consensus 175 ~~~~~~~v~~iv~~v~~~i~~~~~ke~~~~~~~~-~~-------------------~~~~~~~~~~~~~nr~~~~l~~~~ 234 (428)
T PF13347_consen 175 GYRWMALVLAIVGLVFFLITFFFVKERSVEVTEQ-EK-------------------KISLRDSLRSLFRNRPFRILLLAF 234 (428)
T ss_pred HHHHHHHHHHHHHHHHhhhhhheeeecccccccc-cc-------------------ccccccchhhhcccchHHHHHHHH
Confidence 5888888888888776555444 44411111110 00 001112367889999999999999
Q ss_pred HHHHHHHHHHHhhhhHHHHHhhCCChhhHHHHHHHHHHHHHHHHHHHHHHhHHhhhcCC
Q 014481 346 FCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGV 404 (423)
Q Consensus 346 ~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~r~~ 404 (423)
++...+........+.|.+...|.+ ...+.+.....++++++.++.++++||+|+|+.
T Consensus 235 ~~~~~~~~~~~~~~~y~~~~vl~~~-~~~~~~~~~~~~~~~v~~~~~~~l~~r~gk~~~ 292 (428)
T PF13347_consen 235 FLQWLAFALMNTFLPYYFTYVLGNE-GLISIFMLIFFVASIVGSPLWGRLSKRFGKKKV 292 (428)
T ss_pred HHHHhhhhhhhhHHHHHHHHHhcCc-hhhHHHHHHHHHHHHHHHHHHHHHHHHccceee
Confidence 9988888888888888988877777 556777788899999999999999999998864
No 111
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=99.68 E-value=2.7e-15 Score=136.91 Aligned_cols=187 Identities=12% Similarity=0.082 Sum_probs=148.5
Q ss_pred hhhHHHHHHHHHHHHHhhcccchHhHHHHHHhcCCCCchhhHHHHHHhhhhhHHHHHHhhHHHhhhc-------------
Q 014481 199 LAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIEN------------- 265 (423)
Q Consensus 199 ~~~~~~~~~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~------------- 265 (423)
..++++.+++..++.|.|.+...+..+.++++..+++++++.+++.+.++++|.++||.+++.+...
T Consensus 6 ~~~~~~~~l~~~f~~g~G~~~lq~~~n~~v~~~~~~~~~~~~l~~~~~~~~~G~~~gP~i~~~~i~~~~~~~~~~~~~~~ 85 (310)
T TIGR01272 6 SQRYYVLFLGALFVLASGLTILQVAANPYVSILGPIETAASRLALTQAFNKLGTTVAPLFGGSLILSGAGDLSMQVATAN 85 (310)
T ss_pred HhhHHHHHHHHHHHHHhhHHHHHhhHHHHHHHHCCcchHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCCcchhhhhhhhh
Confidence 4567899999999999999999999999999999999999999999999999999999999988732
Q ss_pred ---cCchHHHHHHHHHHHHHHHHHHhhccCCcCcCCCCCcchhhhhhhhhhhhhHHhhccccCCCcHHHhhhcHHHHHHH
Q 014481 266 ---LGWESVFYIFGLLGIAWFSGFKILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMI 342 (423)
Q Consensus 266 ---~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (423)
..|+++|++.+.+.++..+.+.+.+.++.+++.. ++... ++. ...+..+++|.++...
T Consensus 86 ~~~~~~~~~yl~ia~~~~~~~i~~~~~~~p~~~~~~~--~~~~~--------------~~~---~~~~~~~~~~~~~l~~ 146 (310)
T TIGR01272 86 AEAAKVHTPYLLLAGALAVLAIIFAFLPLPELQEADV--ARVSS--------------GDT---TQKTSAFQFTHLVLGA 146 (310)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHccCCCCCcccc--ccccc--------------ccc---cchhhHHhhHHHHHHH
Confidence 3699999987777666555554543322111110 00000 000 0113567888999888
Q ss_pred HHHHHHHHHHHHHHhhhhHHHHHh--hCCChhhHHHHHHHHHHHHHHHHHHHHHHhHHhhhcCC
Q 014481 343 YAHFCGSWGHYTCLSWLPTYFSEE--LSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGV 404 (423)
Q Consensus 343 l~~~~~~~~~~~~~~~~~~~~~~~--~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~r~~ 404 (423)
+..+++...+.++..|++.|+.+. +|+++.+++...+....+.++|+++.+++.||+++|+.
T Consensus 147 ~~~f~yvg~e~~~~~w~~~yl~~~~~~g~s~~~a~~~~s~~~~~~~iGr~~~~~l~~r~g~~~~ 210 (310)
T TIGR01272 147 LGIFVYVGAEVSAGSFLVNFLSDPHALGLPEDQAAHFTAYTWGGAMVGRFIGSAVMPMISQGRY 210 (310)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHH
Confidence 888888889999999999999854 69999999999999999999999999999999997754
No 112
>PRK09848 glucuronide transporter; Provisional
Probab=99.65 E-value=1.6e-14 Score=139.55 Aligned_cols=264 Identities=11% Similarity=0.054 Sum_probs=164.4
Q ss_pred HHHHHHHHHHhhhhhhhhhH-HHhhhhhCCCcchhhHHHHHHHHHHHhhhhhhhhHhhHh----cCchHH-HHHHHHHHH
Q 014481 118 TTSLAFVICNMDKVNLSVAI-IPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIF----GGRKVL-QTGVLIWSL 191 (423)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~----G~r~~~-~~~~~~~~~ 191 (423)
...++.+...+......+++ +.+.+.+|++..++|.+.++..+..++..+++|+++||. |||+.+ .++.+...+
T Consensus 12 ~yg~g~~~~~~~~~~~~~~l~~y~~~~~gl~~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~~~~~Gr~~~~~~~~~~~~~~ 91 (448)
T PRK09848 12 GYSLGDVANNFAFAMGALFLLSYYTDVAGVGAAAAGTMLLLVRVFDAFADVFAGRVVDSVNTRWGKFRPFLLFGTAPLMI 91 (448)
T ss_pred hhccchHHhHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhhhheeeeecCCCCCcCchHHHHHHHHHHHH
Confidence 34445545555555554443 456777899999999999999999999999999999996 777755 455444444
Q ss_pred HHHHHHHhh----h--HHHHHHHHHHHHHhhcccchHhHHHHHHhcCC-CCchhhHHHHHHhh-----hhhHHHHHHhhH
Q 014481 192 ATALLPLLA----G--FMPGLVLSRVLVGIGEGVSPSAATDLIARSIP-LEERSRAVSFVFGG-----LSFGSVAGLLLA 259 (423)
Q Consensus 192 ~~~~~~~~~----~--~~~~~~~~~~l~G~~~~~~~~~~~~~i~~~~~-~~~r~~~~~~~~~~-----~~~g~~~g~~~~ 259 (423)
..++..... . ....+++..++.+++.+...++..++..+... +++|.+..++-..+ ..++..++|.++
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~r~~~~~~r~~~~~~~~~~~~~~~~p~i~ 171 (448)
T PRK09848 92 FSVLVFWVPTDWSHSSKVVYAYLTYMGLGLCYSLVNIPYGSLATAMTQQPQSRARLGAARGIAASLTFVCLAFLIGPSIK 171 (448)
T ss_pred HHHHHHhCcCCCCcchHHHHHHHHHHHHHHHHHHhcccHhhhhhhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333321111 1 12233445566777777777777777777664 46788876665443 335555666665
Q ss_pred HHhhhcc--CchHHHHHHHHHHHHHHH-HHHhhccCCcCcCCCCCcchhhhhhhhhhhhhHHhhccccCCCcHHHhhhcH
Q 014481 260 PPIIENL--GWESVFYIFGLLGIAWFS-GFKILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSK 336 (423)
Q Consensus 260 ~~l~~~~--gw~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 336 (423)
+...... +|.....+.+++.++..+ .....+|+.+.+.+ +. . ....++.+++||
T Consensus 172 ~~~g~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~e~~~~~~~----~~---~----------------~~~~~~~l~~n~ 228 (448)
T PRK09848 172 NSSPEEMVSVYHFWTIVLAIAGMVLYFICFKSTRENVVRIVA----QP---S----------------LKISLQTLKRNR 228 (448)
T ss_pred HhCCCchhhhHHHHHHHHHHHHHHHHHHHHcCcEeccCCCcc----CC---C----------------HHHHHHHHhCCc
Confidence 5432111 121111222222222221 11222332111100 00 0 001256789999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhHHHHHhhCCChhhHHHHHHHHHHHHHHHHHHHHHHhHHhhhcCC
Q 014481 337 AVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGV 404 (423)
Q Consensus 337 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~r~~ 404 (423)
.++...+..++...+........|.|+++.+|.++...++......++.+++.++.+++.||+++|+.
T Consensus 229 ~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~l~~r~g~~~~ 296 (448)
T PRK09848 229 PLFMLCIGALCVLISTFAVSASSLFYVRYVLNDTGLFTVLVLVQNLVGTVASAPLVPGMVARIGKKNT 296 (448)
T ss_pred hHHHHHHHHHHHHHHHHHHhhhheeeEeeecCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHH
Confidence 99999888888888888888888888888888877666665555567788899999999999997744
No 113
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=99.65 E-value=1.3e-13 Score=129.01 Aligned_cols=253 Identities=18% Similarity=0.176 Sum_probs=173.4
Q ss_pred hHHHHHHHHHHHHHHHhhhhhhhhhHHHhhhh--hCCCcchhhHHHHHHHHHHHhhhhhhhhHhhHhcC-chHHHHHHHH
Q 014481 112 RYKLIGTTSLAFVICNMDKVNLSVAIIPMSHR--FGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGG-RKVLQTGVLI 188 (423)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~-r~~~~~~~~~ 188 (423)
+|+.+.+..+..++.....+++.+..-++.++ .+.+.+..|++.++..++.+++++++|++..|.+. |+.++.+.++
T Consensus 32 ~wrsi~l~~~~sfl~~v~~sI~~~s~wpYl~~lD~~A~~~ffG~viaa~slg~~i~~liF~~Ws~k~~~~k~Pli~s~ii 111 (488)
T KOG2325|consen 32 NWRSIYLALLNSFLVAVQFSIYLTSMWPYLQKLDPTATATFFGLVIAASSLGHAIFSLIFGIWSNKTGSVKKPLIVSFLI 111 (488)
T ss_pred chHhHHHHHHHHHHHhhhheEEEeecchhhhhcCCCCCcchhhHHHHHHHHHHHhcchhhcccccccCCcccCHHHHHHH
Confidence 46778888888888888887777764444444 77888899999999999999999999999999997 8999999999
Q ss_pred HHHHHHHHHHh---hh-HHHHHHHHHHHHHhhcccchHhHHHHHHhcCCCCchhhHHHHHHhhhhhHHHHHHhhHHHhhh
Q 014481 189 WSLATALLPLL---AG-FMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIE 264 (423)
Q Consensus 189 ~~~~~~~~~~~---~~-~~~~~~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~ 264 (423)
..++.++.... ++ .-+.++++|++.|+|.+.. ...-+|+++....++|.++++....+..+|.++||.+...+..
T Consensus 112 ~~~g~llY~~l~~~~~~~~y~mL~~R~l~Gvg~~n~-a~lR~Y~a~~s~~~dR~rA~a~~~~~~vlg~ilGp~~q~~f~~ 190 (488)
T KOG2325|consen 112 AIIGNLLYLALAYVPNGVKYLMLVARILTGVGVGNF-AVLRAYIADASTVEDRPRAFAATSGGFVLGIILGPTIQLAFTP 190 (488)
T ss_pred HHHHHHHHHHHHhcccchHHHHHHHHHHcCcCcccH-HHHHHHHHhccCccchHHHHHHhhhHHHHHHHHhHHHHHHHhh
Confidence 99998877333 23 5678999999999997655 6678899998888999999999999888898888888776653
Q ss_pred c--cC-----------chHHHHHHHHHHHHHHHHHHhhccCCcCcCCCCCcchhhhhhhhhhhhhHHhhccccCCCcHHH
Q 014481 265 N--LG-----------WESVFYIFGLLGIAWFSGFKILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKA 331 (423)
Q Consensus 265 ~--~g-----------w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 331 (423)
- -| +..+-|+.+++.++.++..++..++......+.+.+..+ + ...+.++....+.++
T Consensus 191 Lg~~G~~i~~~~~~n~YTap~w~m~i~~i~~~v~i~~~f~E~~~~~~~~~~~~~~-----~--~~~~~~~~~~~~~d~-- 261 (488)
T KOG2325|consen 191 LGEKGFMILPGLIFNMYTAPAWLMAILWIIYIVIILFFFKEVYRGIIDKKKRSVE-----E--EKSDIEKVKKPKLDW-- 261 (488)
T ss_pred hcCCceEEcCcceEEecchHHHHHHHHHHHHHHHHHhheeecccCccccccccch-----h--hccchhhhccCChhH--
Confidence 1 11 335667777777776555544444333322221111110 0 000000011111111
Q ss_pred hhhcHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHhhCCChhhHHHHH
Q 014481 332 IFRSKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVS 378 (423)
Q Consensus 332 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~ 378 (423)
...+...+..+...+......+..+......++++..++....
T Consensus 262 ----~~~~vc~~~~~~~~~~~~~iet~~~~~~m~~y~w~~~~av~~~ 304 (488)
T KOG2325|consen 262 ----VAVLVCIFLRFVVNFIATTIETLSSALTMVMYGWTGSEAVLYN 304 (488)
T ss_pred ----HHHHHHHHHHHHHHHHHHHHHhccchHHHHHhccccchHHHhh
Confidence 2334445555666666666677777777777888877765443
No 114
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.64 E-value=2.3e-14 Score=139.97 Aligned_cols=172 Identities=12% Similarity=0.082 Sum_probs=128.3
Q ss_pred HHhhhhhhhhhHHHhh-hhhCCCcchhhHHHHHHHHHHHhhhhhhhhHhhHhcCchHHHHHHHHHHHHHHH-HH-HhhhH
Q 014481 126 CNMDKVNLSVAIIPMS-HRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATAL-LP-LLAGF 202 (423)
Q Consensus 126 ~~~~~~~~~~~~~~~~-~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~-~~-~~~~~ 202 (423)
.....+.....+|.+. +.+|.+..+.++..+...++..++.++.|+++||+|||+.++++.++..++... +. ..+++
T Consensus 262 ~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (490)
T PRK10642 262 TNVTYYMLLTYMPSYLSHNLHYSEDHGVLIIIAIMIGMLFVQPVMGLLSDRFGRRPFVILGSVALFVLAIPAFILINSNV 341 (490)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 3344445555667654 567988888888888889999999999999999999999988877654433322 21 12344
Q ss_pred HHHHHHHHHHHHhhcccchHhHHHHHHhcCCCCchhhHHHHHHhhhhhHHHHHHhhHHHhhhcc-CchHHHHHHHHHHHH
Q 014481 203 MPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENL-GWESVFYIFGLLGIA 281 (423)
Q Consensus 203 ~~~~~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~-gw~~~~~~~~~~~~~ 281 (423)
...+++++++.|++.+........++.+.+|++.|++++|+.+....+++.++|.+.+++.+.. +|+.++++..+.+++
T Consensus 342 ~~~~~~~~~~~g~~~~~~~g~~~~~~~~~~p~~~Rg~~~g~~~~~~~~~g~~~p~i~g~l~~~~~~~~~~~~~~~~~~~i 421 (490)
T PRK10642 342 IGLIFAGLLMLAVILNCFTGVMASTLPAMFPTHIRYSALAAAFNISVLVAGLTPTLAAWLVESTQNLMMPAYYLMVVAVI 421 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHH
Confidence 5667788888888777666777888899999999999999855556677788999999988764 477777777777777
Q ss_pred HHHHHHhhccCCcCcC
Q 014481 282 WFSGFKILQEGETSNG 297 (423)
Q Consensus 282 ~~~~~~~~~~~~~~~~ 297 (423)
.++..+++||+++...
T Consensus 422 ~~~~~~~~pes~~~~~ 437 (490)
T PRK10642 422 GLITGVTMKETANRPL 437 (490)
T ss_pred HHHHHHHhccccCCCC
Confidence 6666777788766543
No 115
>PRK11462 putative transporter; Provisional
Probab=99.64 E-value=9.7e-14 Score=133.97 Aligned_cols=263 Identities=12% Similarity=0.042 Sum_probs=175.5
Q ss_pred HHHHHHHHHHhhhhhhhhhHH-HhhhhhCCCcchhhHHHHHHHHHHHhhhhhhhhHhhH----hcCchHHH-HHHHHHHH
Q 014481 118 TTSLAFVICNMDKVNLSVAII-PMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKI----FGGRKVLQ-TGVLIWSL 191 (423)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr----~G~r~~~~-~~~~~~~~ 191 (423)
...++.+...........++. .+.+.+|+++..+|.+..+.-+.-++..|+.|.++|| +||||..+ ++.+..++
T Consensus 13 ~Yg~g~~~~~~~~~~~~~~l~~fyt~~~Gl~~~~~g~i~~~~ri~Dai~Dp~~G~~~D~t~~r~Gr~rp~il~g~i~~~i 92 (460)
T PRK11462 13 GYGMGDAASHIIFDNVMLYMMFFYTDIFGIPAGFVGTMFLVARALDAISDPCMGLLADRTRSRWGKFRPWVLFGALPFGI 92 (460)
T ss_pred hhccchhhhhHHHHHHHHHHHHHHHHhhCCCHHHHHHHHHHHHHHHHHHhhhheehhccCCCCCCCcchhHhHHHHHHHH
Confidence 334444444444455554444 4667789999999999999999999999999999996 68876655 46566666
Q ss_pred HHHHHHHhhhH------HHHHHHHHHHHHhhcccchHhHHHHHHhcCC-CCchhhHHHHHHhhhhhHHHHHHhhHHHhhh
Q 014481 192 ATALLPLLAGF------MPGLVLSRVLVGIGEGVSPSAATDLIARSIP-LEERSRAVSFVFGGLSFGSVAGLLLAPPIIE 264 (423)
Q Consensus 192 ~~~~~~~~~~~------~~~~~~~~~l~G~~~~~~~~~~~~~i~~~~~-~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~ 264 (423)
+..++ +..+. ...+.+..++..++......+..++.++..+ +++|.+..++...+..+|..+++.+...+..
T Consensus 93 ~~~ll-f~~p~~s~~~~~~y~~~~~~~~~~~~t~~~ipy~al~~~lt~d~~eRt~l~s~r~~~~~iG~~~~~~~~~plv~ 171 (460)
T PRK11462 93 VCVLA-YSTPDLSMNGKMIYAAITYTLLTLLYTVVNIPYCALGGVITNDPTQRISLQSWRFVLATAGGMLSTVLMMPLVN 171 (460)
T ss_pred HHHHH-HhCCCCCcchHHHHHHHHHHHHHHHHHHHhccHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 66554 32221 2345556667788888888888899999886 6889999999999999998888777655544
Q ss_pred c-------cCchHHHHHHHHHHHHHHHHHHhhccCCcCcCCCCCcchhhhhhhhhhhhhHHhhccccCCCcHHHhhhcHH
Q 014481 265 N-------LGWESVFYIFGLLGIAWFSGFKILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKA 337 (423)
Q Consensus 265 ~-------~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 337 (423)
. .||+....+.+++.+++.++.+...+++.+.+. ++.. .. ..++..++||.
T Consensus 172 ~~g~~~~~~g~~~~~~i~~ii~~i~~~i~~~~~kE~~~~~~---~~~~---~~----------------~~l~~~~~Nk~ 229 (460)
T PRK11462 172 LIGGDNKPLGFQGGIAVLSVVAFMMLAFCFFTTKERVEAPP---TTTS---MR----------------EDLRDIWQNDQ 229 (460)
T ss_pred HhCCCchhhhHHHHHHHHHHHHHHHHHHHHhcceeccCCCc---cCCC---HH----------------HHHHHHhCChH
Confidence 3 257777777777665554443332222211110 0000 00 02467788988
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhHHHHHhhCCChhhHHHHHHHHHHHHHHHHHHHHHHhHHhhhcCC
Q 014481 338 VWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGV 404 (423)
Q Consensus 338 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~r~~ 404 (423)
++.++...++..............|.+...|. +...+.+.....++++++.++++++.||+++|+.
T Consensus 230 ~~~l~~~~~~~~~~~~~~~~~~~y~~~y~~g~-~~~~~~~l~~~~i~~iig~~l~~~l~~r~gkk~~ 295 (460)
T PRK11462 230 WRIVGLLTIFNILAVCVRGGAMMYYVTWILGT-PEVFVAFLTTYCVGNLIGSALAKPLTDWKCKVTI 295 (460)
T ss_pred HHHHHHHHHHHHHHHHHHHhHhhhhhhhhcCC-hHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHH
Confidence 88776666666655555544445455443443 3344556777888899999999999999988743
No 116
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=99.64 E-value=8.3e-14 Score=128.90 Aligned_cols=177 Identities=18% Similarity=0.288 Sum_probs=143.9
Q ss_pred HHHHHHHHHHHHhhhhhhhhh-HHHhhhhhC----CCcchhhHHHHHHHHHHHhhhhhhhhHhhHh-cCchHHHHHHHHH
Q 014481 116 IGTTSLAFVICNMDKVNLSVA-IIPMSHRFG----WNSSVAGLVQSSFFWGYALSQLPGGWLAKIF-GGRKVLQTGVLIW 189 (423)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~----~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-G~r~~~~~~~~~~ 189 (423)
+..++..-+-.-+..+.+... .-++..+++ ++++++.-+.+.|....-+..+++||++||+ |+|++++++.+++
T Consensus 23 l~~if~vE~WERFsyYGmraiL~~Yl~~~~~~gLg~~~~~A~~l~~~y~slVY~t~i~GG~laDr~LG~~~tI~lGail~ 102 (498)
T COG3104 23 LYLIFFVELWERFSYYGMRAILILYLYYQLGDGLGFDETHATGLFSAYGSLVYLTPIIGGWLADRVLGTRRTIVLGAILM 102 (498)
T ss_pred HHHHHHHHHHHHHhhhhhHHHHHHHHHHhccccCCcChHhhHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHH
Confidence 444555555555554444333 334555555 9999998888888888889999999999995 9999999999999
Q ss_pred HHHHHHHHHhh-hHHHHHHHHHHHHHhhcccchHhHHHHHHhcCCCC--chhhHHHHHHhhhhhHHHHHHhhHHHhhhcc
Q 014481 190 SLATALLPLLA-GFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLE--ERSRAVSFVFGGLSFGSVAGLLLAPPIIENL 266 (423)
Q Consensus 190 ~~~~~~~~~~~-~~~~~~~~~~~l~G~~~~~~~~~~~~~i~~~~~~~--~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~ 266 (423)
+++.++++..+ .....++++.++.++|.|..-+...++++|.+|++ +|-..+++++.+.++|+.++|++.+++.+..
T Consensus 103 ~iGh~~L~~~~~~~~~gl~i~L~~I~iG~Gl~K~NiS~llg~ly~~~DprrD~gFt~fY~~iNiGsl~~p~i~~~~~~~~ 182 (498)
T COG3104 103 AIGHLVLAISSVSGPGGLYIGLALIIVGTGLFKPNISSLLGELYPKDDPRRDGGFTLFYMGINIGSLIAPIITGLLAINY 182 (498)
T ss_pred HHHHHHHhccccccccHHHHHHHHHHhccccccccHHHHHHHhcCCCCcccCCCccEEEEEeehHHHHHHHHHHHHHHhh
Confidence 99998885443 34577888888899999999999999999999754 4788899999999999999999999999999
Q ss_pred CchHHHHHHHHHHHHHHHHHHhhccC
Q 014481 267 GWESVFYIFGLLGIAWFSGFKILQEG 292 (423)
Q Consensus 267 gw~~~~~~~~~~~~~~~~~~~~~~~~ 292 (423)
||...|...++-..+.++.+.+.++.
T Consensus 183 g~~~gF~~aavGm~~gl~~f~~~~r~ 208 (498)
T COG3104 183 GWHVGFGLAAVGMIIGLVIFLLGRRH 208 (498)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHccch
Confidence 99999999888887777777666543
No 117
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.63 E-value=6.4e-15 Score=140.60 Aligned_cols=160 Identities=19% Similarity=0.255 Sum_probs=127.9
Q ss_pred hhhhHHHhhhhhCCCc--------chhhHHHHHHHHHHHhhhhhhhhHhhHhcCchHHHHHHHHHHHHHHHHHHhhh---
Q 014481 133 LSVAIIPMSHRFGWNS--------SVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPLLAG--- 201 (423)
Q Consensus 133 ~~~~~~~~~~~~~~s~--------~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~~--- 201 (423)
.....+.+.++.|.++ ...+...++..++..++.++.|+++||+|+|+++.++.++.++...+......
T Consensus 227 ~~~~~~~~~~~~g~~~~~~~~~~~~~~g~~~~~~~i~~i~~~~~~g~l~dr~g~r~~l~~~~~~~~v~~~l~~~~~~~~~ 306 (418)
T TIGR00889 227 TNIFGNGFLHEFGRNPEFADSFVVKNASIWMSLSQFSEIFFILTIPFFLKRFGIKKVMLLSLVAWALRFGFFAYGDPEYF 306 (418)
T ss_pred HHHhHHHHHHHhcccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCcchh
Confidence 3344455555666443 56799999999999999999999999999999999999988887655533222
Q ss_pred HHHHHHHHHHHHHhhcccchHhHHHHHHhcCCCCchhhHHHHHH-hhhhhHHHHHHhhHHHhhhc------cCchHHHHH
Q 014481 202 FMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVF-GGLSFGSVAGLLLAPPIIEN------LGWESVFYI 274 (423)
Q Consensus 202 ~~~~~~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~-~~~~~g~~~g~~~~~~l~~~------~gw~~~~~~ 274 (423)
+++.+++.+++.|++.+...+....++.+++|+++|++++|+.+ ....+|..+||+++|.+.++ +||++.|.+
T Consensus 307 ~~~~l~l~~~l~g~~~~~~~~~~~~~i~~~~p~~~~g~~~g~~~~~~~~lg~~iGp~l~G~l~~~~g~~~~~~~~~~f~~ 386 (418)
T TIGR00889 307 GYALLFLSMIVYGCAFDFFNISGSVFVEKEVPVHIRASAQGLFTLMCNGFGSLLGYILSGVMVEKMFAYGTFDWQTMWLF 386 (418)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhccccCCchHHHHHH
Confidence 23556778999999988888888999999999999999999997 67889999999999999987 469999998
Q ss_pred HHHHHHHHHHHH-HhhccC
Q 014481 275 FGLLGIAWFSGF-KILQEG 292 (423)
Q Consensus 275 ~~~~~~~~~~~~-~~~~~~ 292 (423)
.+++.++..++. ++++++
T Consensus 387 ~~~~~~i~~~l~~~~~~~~ 405 (418)
T TIGR00889 387 FAGYIAILAVLFMIFFKYS 405 (418)
T ss_pred HHHHHHHHHHHHHHHhCCc
Confidence 888876664444 444443
No 118
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=99.62 E-value=3.7e-13 Score=129.03 Aligned_cols=241 Identities=17% Similarity=0.105 Sum_probs=176.4
Q ss_pred hhhHHHHHHHHHHHhhhhhhhhHhhHhcCchHHHHHHHHHHH-HHHHHHHh-hhHHHHHHHHHHHHHhhcccchHhHHHH
Q 014481 150 VAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSL-ATALLPLL-AGFMPGLVLSRVLVGIGEGVSPSAATDL 227 (423)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~-~~~~~~~~-~~~~~~~~~~~~l~G~~~~~~~~~~~~~ 227 (423)
..++..++..+..++..|+.|.++|+-|+||.++....+.++ .++++.+. .+.++...++.++.-++.+.......++
T Consensus 71 ~~~~~~sis~l~~all~P~lGa~aD~~~~Rk~~l~~~~~~~~~~~~~l~~v~~~~~~~~~~l~iia~v~~~~~~vfyna~ 150 (477)
T PF11700_consen 71 LWLYANSISGLLQALLAPFLGAIADYGGRRKRFLLIFTLLGVLATALLWFVSPGQWWLALVLFIIANVGYEASNVFYNAY 150 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 356778899999999999999999999988888776555444 34444333 3444455555566667777888889999
Q ss_pred HHhcCCCCch--------------------------hhHHHHHHhhhhhHHHHHHhhHHHhhhc--------cCchHHHH
Q 014481 228 IARSIPLEER--------------------------SRAVSFVFGGLSFGSVAGLLLAPPIIEN--------LGWESVFY 273 (423)
Q Consensus 228 i~~~~~~~~r--------------------------~~~~~~~~~~~~~g~~~g~~~~~~l~~~--------~gw~~~~~ 273 (423)
+.+..+++++ ++..+.-.....+|+++.-++.-.+... .+.|..+.
T Consensus 151 LP~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vS~~G~a~Gy~G~~v~l~i~l~~~~~~~~~~~~~~~~r~~~~ 230 (477)
T PF11700_consen 151 LPDLARPEPRVRAAREPSANGNISDSEYEAVDSLTRGRVSGLGWALGYIGGLVALLISLLLVISPGSTASNTWAIRVAFL 230 (477)
T ss_pred hHhhcCCChhhhhhhhhhccCCCChhhhhhHHHhhhchhHHHHHHHHHHHHHHHHHHHHHHHHcCCCccccchhhhHHHH
Confidence 9999998888 8999998888888888877776555322 23477777
Q ss_pred HHHHHHHHHHH-HHHhhccCCcCcCCCCCcchhhhhhhhhhhhhHHhhccccCCCcHHHhhhcHHHHHHHHHHHHHHHHH
Q 014481 274 IFGLLGIAWFS-GFKILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGH 352 (423)
Q Consensus 274 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 352 (423)
+.++.-++..+ .++++|+.+++...+..... . ....++. ...++++.++|.+..++++.+++.-+.
T Consensus 231 ~~a~ww~vfsiP~~~~~~~~~~~~~~~~~~~~-~---~~g~~~l---------~~t~k~~~~~~~~~~fLia~~l~~dg~ 297 (477)
T PF11700_consen 231 IVALWWLVFSIPLFLWLPDRPGPRPLPSGSSY-L---RFGFKRL---------WRTFKEIRKLRQLFLFLIAYFLYSDGV 297 (477)
T ss_pred HHHHHHHHHHHHHHHhCCCCCCCCCCCcchhH-H---HHHHHHH---------HHHHHHHHhChHHHHHHHHHHHHHHHH
Confidence 77777665544 44455554432211111110 0 0000000 012567778899999999999999999
Q ss_pred HHHHhhhhHHHHHhhCCChhhHHHHHHHHHHHHHHHHHHHHHHhHHhhhcC
Q 014481 353 YTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATG 403 (423)
Q Consensus 353 ~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~r~ 403 (423)
..+......|.++.+|++..+...+..+..+.+++|.++.|++.||+|.|.
T Consensus 298 ~ti~~~~~i~a~~~lg~s~~~l~~~~l~~~i~a~~Ga~~~g~l~~r~g~k~ 348 (477)
T PF11700_consen 298 NTIISFAGIYATEVLGMSTTQLIVFGLVVQIVAIIGALLFGWLQDRFGPKT 348 (477)
T ss_pred HHHHHHHHHHHHHhcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCch
Confidence 999999999999999999999999999999999999999999999999883
No 119
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.61 E-value=5e-14 Score=133.73 Aligned_cols=157 Identities=16% Similarity=0.121 Sum_probs=126.0
Q ss_pred hhhhHHH-hhhhhCCCcchhhHHHHHHHHHHHhhhhhhhhHhhHhcCchHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHH
Q 014481 133 LSVAIIP-MSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPLLAGFMPGLVLSRV 211 (423)
Q Consensus 133 ~~~~~~~-~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 211 (423)
+....|. +.+++|.++.+.+++.+...+...++.++.|+++||+|+|+.+..+.+...+..... ...++.+.+++.++
T Consensus 235 ~~~~~p~~l~~~~~~~~~~~g~~~~~~~~~~i~~~~~~G~l~dr~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~~ 313 (393)
T PRK15011 235 YIINMPLFIINELHLPEKLAGVMMGTAAGLEIPTMLIAGYFAKRLGKRFLMRVAAVAGVCFYAGM-LMAHSPAILLGLQL 313 (393)
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHH-HHHhhHHHHHHHHH
Confidence 3445555 556789999999999888888888899999999999999998887766554443333 34556667777888
Q ss_pred HHHhhcccchHhHHHHHHhcCCCCchhhHHHHHHhhhhhHHHHHHhhHHHhhhccCchHHHHHHHHHHHHHHHHHHhhcc
Q 014481 212 LVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAWFSGFKILQE 291 (423)
Q Consensus 212 l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~~~~~~~~~~~~~~~~~~~~~ 291 (423)
+.+++.+...+....+..|.+| ++|++++++++...++|..+||.++|.+.+..||+..|++.+++.++.++..++.++
T Consensus 314 l~~~~~g~~~~~~~~~~~~~~p-~~~g~~~~~~~~~~~lg~~~g~~l~G~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 392 (393)
T PRK15011 314 LNAIYIGILGGIGMLYFQDLMP-GQAGSATTLYTNTSRVGWIIAGSLAGIVAEIWNYHAVFWFALVMIIATLFCLLRIKD 392 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHhCC-CCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhhcC
Confidence 8888777776777788889888 569999999999999999999999999999999999999888888777776666643
No 120
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.61 E-value=5.5e-14 Score=133.85 Aligned_cols=160 Identities=21% Similarity=0.149 Sum_probs=130.8
Q ss_pred hhhhhHHHhhhhhCCCcchhhHHHHHHHHHHHhhhhhhhhHhhHhcCchHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHH
Q 014481 132 NLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPLLAGFMPGLVLSRV 211 (423)
Q Consensus 132 ~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 211 (423)
.....++.+.++.|. ...++..+.+.++..++.++.|++.||+|+|+.+..+..+.+++.++.. ..++.+.+++..+
T Consensus 234 ~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 310 (399)
T PRK05122 234 TIATFITLYYAARGW--DGAALALTLFGVAFVGARLLFGNLINRLGGLRVAIVSLLVEILGLLLLW-LAPSPWMALIGAA 310 (399)
T ss_pred HHHHHHHHHHHHccc--ccchHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHH-HhccHHHHHHHHH
Confidence 334445555455565 3456777888899999999999999999999999888888777776653 4556677778889
Q ss_pred HHHhhcccchHhHHHHHHhcCCCCchhhHHHHHHhhhhhHHHHHHhhHHHhhhccCchHHHHHHHHHHHHHHHHHHhhcc
Q 014481 212 LVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAWFSGFKILQE 291 (423)
Q Consensus 212 l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~~~~~~~~~~~~~~~~~~~~~ 291 (423)
+.|++.+...+.....+.+.+|+++|++++|+++....+|..+++++.|.+.+..||++.|++.+++.++.++..+++++
T Consensus 311 l~G~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 390 (399)
T PRK05122 311 LTGFGFSLVFPALGVEAVKRVPPQNRGAALGAYSVFLDLSLGITGPLAGLVASWFGYPSIFLAAALAALLGLALTWLLYR 390 (399)
T ss_pred HHHHhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 99999988888888888899999999999999999999999999999999999999999999988888777666666655
Q ss_pred CCc
Q 014481 292 GET 294 (423)
Q Consensus 292 ~~~ 294 (423)
+++
T Consensus 391 ~~~ 393 (399)
T PRK05122 391 RAP 393 (399)
T ss_pred ccc
Confidence 444
No 121
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=99.61 E-value=4.7e-15 Score=118.84 Aligned_cols=134 Identities=29% Similarity=0.504 Sum_probs=117.1
Q ss_pred HHHHHHHHHhhhhhhhhHhhHhcCchHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhhcccchHhHHHHHHhcCCC
Q 014481 155 QSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPL 234 (423)
Q Consensus 155 ~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~i~~~~~~ 234 (423)
.+.+.++..++.++.|++.||+|||+.+..+..+..++.++. ...++.+.+.+.+++.|++.+...+....++.|.+|+
T Consensus 4 ~~~~~~~~~~~~~~~g~~~d~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 82 (141)
T TIGR00880 4 LAGYALGQLIYSPLSGLLTDRFGRKPVLLVGLFIFVLSTAMF-ALSSNITVLIIARFLQGFGAAFALVAGAALIADIYPP 82 (141)
T ss_pred EEeehhHHHHHHhhHHHHHhhcchhHHHHHHHHHHHHHHHHH-HHhccHHHHHHHHHHHHHHHHHHHHhHHHHHHHHCCh
Confidence 445678888999999999999999999999988888777666 3456678888999999999999999999999999999
Q ss_pred CchhhHHHHHHhhhhhHHHHHHhhHHHhhhccCchHHHHHHHHHHHHHHHHHHhh
Q 014481 235 EERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAWFSGFKIL 289 (423)
Q Consensus 235 ~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~~~~~~~~~~~~~~~~~~~ 289 (423)
++|++++++.+....+|..++|.+++.+.+..+|++.+++.+++.++..+...++
T Consensus 83 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 137 (141)
T TIGR00880 83 EERGVALGLMSAGIALGPLLGPPLGGVLAQFLGWRAPFLFLAILALAAFILLAFL 137 (141)
T ss_pred hhhhHHHHHHHHhHHHHHHHhHHhHHHHhcccchHHHHHHHHHHHHHHHHHHhhc
Confidence 9999999999999999999999999999998999999999888777665554444
No 122
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=99.60 E-value=4.3e-14 Score=141.50 Aligned_cols=140 Identities=12% Similarity=0.031 Sum_probs=117.5
Q ss_pred HHHHHHHHHHHhhhhhhhhHhhHhcCchHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhhcccchHhHHHHHHhcC
Q 014481 153 LVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSI 232 (423)
Q Consensus 153 ~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~i~~~~ 232 (423)
+...+..++.+++.++.|+++||+|||++++++.++.+++.++++ +.++...+++++++.|++.++.++...++++|++
T Consensus 599 ~~~~l~~l~~i~G~il~g~L~Dr~GRr~~l~~~~~lsai~~ll~~-~~~s~~~ll~~~~l~g~~~~~~~~~~~a~~aEl~ 677 (742)
T TIGR01299 599 FVNFLGTLAVLPGNIVSALLMDKIGRLRMLAGSMVLSCISCFFLS-FGNSESAMIALLCLFGGLSIAAWNALDVLTVELY 677 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHH-HHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 345567788899999999999999999999999999888887774 4444466777788888888888899999999999
Q ss_pred CCCchhhHHHHHHhhhhhHHHHHHhhHHHhhhccCchHHHHHHHHHHHHHHHHHHhhccCCc
Q 014481 233 PLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAWFSGFKILQEGET 294 (423)
Q Consensus 233 ~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (423)
|.+.|++++|+.+....+|.++||++++.+.+. +...+|++.+++.++.+++..++||+..
T Consensus 678 Pt~~Rgta~Gi~~~~~rlGaiigp~i~g~L~~~-~~~~pf~i~a~~lll~~ll~~~LPET~~ 738 (742)
T TIGR01299 678 PSDKRATAFGFLNALCKAAAVLGILIFGSFVGI-TKAAPILFASAALACGGLLALKLPDTRG 738 (742)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-hhHHHHHHHHHHHHHHHHHHHhCCCCcc
Confidence 999999999999999999999999999988765 4567788888877777777777776543
No 123
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.59 E-value=1.4e-14 Score=138.87 Aligned_cols=147 Identities=12% Similarity=0.048 Sum_probs=124.2
Q ss_pred hCCCcchhhHHHHHHHHHHHhhhhhhhhHhhHhcCchHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhhcccchHh
Q 014481 144 FGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPLLAGFMPGLVLSRVLVGIGEGVSPSA 223 (423)
Q Consensus 144 ~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~ 223 (423)
.+.+..+.|++.++..++..++.+++|++.||+|+|+.+.++.++.+++.++.+ +.++.+.+++++++.|++.+...+.
T Consensus 257 ~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~l~~~~~~l~~-~~~~~~~~~~~~~l~g~~~~~~~~~ 335 (420)
T PRK09528 257 PEQGTRVFGYLNSFQVFLEALIMFFAPFIINRIGAKNALLLAGTIMAVRIIGSG-FATGPLEVSILKLLHAFEVPFLLVG 335 (420)
T ss_pred cCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcchhhHHHHHHHHHHHHHHH-hcccHHHHHHHHHHHHHHHHHHHHH
Confidence 356667889999999999999999999999999999999998888888776664 4566678888899999988887788
Q ss_pred HHHHHHhcCCCCchhhHHHH-HHhhhhhHHHHHHhhHHHhhhccCchHHHHHHHHHHHHHHHHHHhhcc
Q 014481 224 ATDLIARSIPLEERSRAVSF-VFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAWFSGFKILQE 291 (423)
Q Consensus 224 ~~~~i~~~~~~~~r~~~~~~-~~~~~~~g~~~g~~~~~~l~~~~gw~~~~~~~~~~~~~~~~~~~~~~~ 291 (423)
...++.+.+|++.+++..+. ++....+|.+++|.+.|++.+..||+..|++.+++.++..+..++..+
T Consensus 336 ~~~~~~~~~~~~~~a~~~~~~~~~~~~lg~~ig~~~~G~l~~~~G~~~~f~~~~~~~~i~~~~~~~~~~ 404 (420)
T PRK09528 336 VFKYITLNFDVRLSATIYLVGFQFAKQLGAVFLSTLAGNLYDSIGFQGTYLILGGIVLLFTLISVFTLS 404 (420)
T ss_pred HHHHHHHHcCccceeeeeeehHHHHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHhc
Confidence 88899999999889888765 677889999999999999999999999999988887766544444433
No 124
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.59 E-value=2.4e-14 Score=134.87 Aligned_cols=150 Identities=16% Similarity=0.124 Sum_probs=125.2
Q ss_pred hhhhHHHhhhhhCCCcchhhHHHHHHHHHHHhhhhhhhhHhhHhcCchHHHHHHHHHHHHHHHHHHhhh-HHHHHHHHHH
Q 014481 133 LSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPLLAG-FMPGLVLSRV 211 (423)
Q Consensus 133 ~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 211 (423)
.....+.+.+++|.+..+.+++.+.+.++..++.++.|++.||+|||+.+.++.++.+++.++...... +...+++..+
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (377)
T TIGR00890 224 LIGLYKPYGQSLGLSDGFLVLAVSISSIFNGGGRPFLGALSDKIGRQKTMSIVFGISAVGMAAMLFIPMLNDVLFLATVA 303 (377)
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHcccchhHHHHHHHH
Confidence 334455566788999889999999999999999999999999999999999988887777765533222 2233445677
Q ss_pred HHHhhcccchHhHHHHHHhcCCCCchhhHHHHHHhhhhhHHHHHHhhHHHhhhccCchHHHHHHHHHHHHH
Q 014481 212 LVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAW 282 (423)
Q Consensus 212 l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~~~~~~~~~~~~ 282 (423)
+.|++.+...+....++.|.+|+++|++++|+.+....+|..++|.+.+.+.+..||++.|++.+++.++.
T Consensus 304 ~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~f~~~~~~~~~~ 374 (377)
T TIGR00890 304 LVFFTWGGTISLFPSLVSDIFGPANSAANYGFLYTAKAVAGIFGGLIASHALTEIGFEYTFIVTGAFALTS 374 (377)
T ss_pred HHHHHhccchhccHHHHHHHhhhhhhhhHhHHHHHHHHHHHHHHHHHHHHHHhhhchhhHHHHHHHHHHHh
Confidence 88888888888888899999999999999999999999999999999999999999999999888776654
No 125
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=99.57 E-value=5e-13 Score=124.81 Aligned_cols=269 Identities=14% Similarity=0.140 Sum_probs=197.8
Q ss_pred HHHHHHHHHHhhhhhhhhhHHH-hhhhhCCCcchhhHHHHHHHHHHHhhhhhhhhHhhH----hcCchH-HHHHHHHHHH
Q 014481 118 TTSLAFVICNMDKVNLSVAIIP-MSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKI----FGGRKV-LQTGVLIWSL 191 (423)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr----~G~r~~-~~~~~~~~~~ 191 (423)
...++-+...+.......++.. +.+.+|+++..+|.++.+.-+--++..|+.|.++|| +||+|. ++++.+..++
T Consensus 16 ~Yg~gd~~~~~~~~~~~~yLl~fYTdv~Gis~~~aG~iflv~RiiDAi~DP~~G~i~D~t~~r~GrfRP~lL~g~ip~~i 95 (467)
T COG2211 16 GYGLGDFASNFAFGIVVLYLLFFYTDVFGLSAALAGTIFLVARIIDAITDPIMGFIVDRTRSRWGRFRPWLLWGAIPFAI 95 (467)
T ss_pred hhcchhhHHHHHHHHHHHHHHHHHhcccCCcHHHHHHHHHHHHHHHHHhcchheeeecccccccccccHHHHHHhHHHHH
Confidence 4444555555555555555555 667789999999999999999999999999999996 677555 4556677777
Q ss_pred HHHHHHHhhh------HHHHHHHHHHHHHhhcccchHhHHHHHHhcCC-CCchhhHHHHHHhhhhhHHHHHHhhHHHhhh
Q 014481 192 ATALLPLLAG------FMPGLVLSRVLVGIGEGVSPSAATDLIARSIP-LEERSRAVSFVFGGLSFGSVAGLLLAPPIIE 264 (423)
Q Consensus 192 ~~~~~~~~~~------~~~~~~~~~~l~G~~~~~~~~~~~~~i~~~~~-~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~ 264 (423)
...++ +.++ .....++..++.+++......+..++.+++.+ ++||.+..++-..+.++|..+...+.+.+..
T Consensus 96 ~~~l~-F~~p~~~~~~k~~ya~vtY~l~~l~YT~vniPy~al~~~iT~d~~ER~~l~s~R~~~~~~g~~l~~~~~~plv~ 174 (467)
T COG2211 96 VAVLL-FITPDFSMTGKLIYALVTYMLLGLGYTLVNIPYGALGPEITQDPQERASLTSWRMVFASLGGLLVAVLFPPLVK 174 (467)
T ss_pred HHHHH-HcCCCcccCcchHHHHHHHHHHHHHHHheeCchhhcchhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 77666 3443 23456677788999999988888999999984 6889999999999999987777666655553
Q ss_pred -------ccCchHHHHHHHHHHHHHHHHHHhh-ccCCcCcCCCCCcchhhhhhhhhhhhhHHhhccccCCCcHHHhhhcH
Q 014481 265 -------NLGWESVFYIFGLLGIAWFSGFKIL-QEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSK 336 (423)
Q Consensus 265 -------~~gw~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 336 (423)
..||+...++.+++.++..+..++- +|+..+..... ...+. . -...+..+++|+
T Consensus 175 ~~g~~~~~~g~~~~~~~~~vi~~i~~l~~~~~v~ER~~~~~~~~-~~~~~-~----------------~~~~~~~~~~Nr 236 (467)
T COG2211 175 LFGGGDKALGYQGTALVLGVIGVILLLFCFFNVKERVVETQPTK-TGVKL-K----------------LKDSFLLIFKNR 236 (467)
T ss_pred HhCCCcchhhHHHHHHHHHHHHHHHHHHHHHHhhcccCccccCc-ccccc-c----------------HHHHHHHHHccc
Confidence 3478888888888877765555443 33332111111 00000 0 000134678999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhHHHHHhhCCChhhHHHHHHHHHHHHHHHHHHHHHHhHHhhhcCCc
Q 014481 337 AVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVE 405 (423)
Q Consensus 337 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~r~~~ 405 (423)
.+...++..++...+.....+....|.+...|.+.....+.......+.+++.++..++.+|+|+|+.-
T Consensus 237 p~~~~l~~~l~~~~~~~i~~s~~~yy~~y~lg~~~l~~~~~~~~~~~~~l~~~~~~p~L~~~~gkk~~~ 305 (467)
T COG2211 237 PLLLLLLMNLLLFIAFNIRGSIMVYYVTYVLGDPELFAYLLLLASGAGLLIGLILWPRLVKKFGKKKLF 305 (467)
T ss_pred hHHHHHHHHHHHHHHHHHHhhhhheeEEEEcCChHHHHHHHHHHHHHHHHHHHHhHHHHHHHhchHHHH
Confidence 999999888888888888888888888888888888888888888899998899999999999988553
No 126
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=99.57 E-value=2.2e-12 Score=115.38 Aligned_cols=247 Identities=17% Similarity=0.127 Sum_probs=168.8
Q ss_pred hhhhhhhhhHHHhhhhhCCCcchhhHHHHHHHHHHHhhhhhhhhHhhHhcCchHHHHHHHHHHHHHHHHHHhhhHHHHHH
Q 014481 128 MDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPLLAGFMPGLV 207 (423)
Q Consensus 128 ~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (423)
......+|+.-.+.+++|++..+++.+........++..++.|.++||+|||+..++.+++++++++.- ..++++.++
T Consensus 48 ~aDWLQGpY~Y~LY~~yg~~~~qIa~Lf~~Gf~Ss~i~g~~~G~laD~~Grk~~cl~~cily~~scl~k--~~~~~~~L~ 125 (354)
T PF05631_consen 48 AADWLQGPYLYALYESYGFSEHQIAILFVAGFASSAIFGTFVGSLADRYGRKKACLLFCILYSLSCLTK--HSSNYPVLL 125 (354)
T ss_pred HHHHhhcchhHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHH--hccccHHHH
Confidence 344455565556667899999999999999999999999999999999999999999999998888543 457789999
Q ss_pred HHHHHHHhhcccchHhHHHHHH-hcC----CCCchhhHHHHHH-hhhhhHHHHHHhhHHHhhhccCc--hHHHHHHHHHH
Q 014481 208 LSRVLVGIGEGVSPSAATDLIA-RSI----PLEERSRAVSFVF-GGLSFGSVAGLLLAPPIIENLGW--ESVFYIFGLLG 279 (423)
Q Consensus 208 ~~~~l~G~~~~~~~~~~~~~i~-~~~----~~~~r~~~~~~~~-~~~~~g~~~g~~~~~~l~~~~gw--~~~~~~~~~~~ 279 (423)
++|++.|++.+....+--++.. |.- |++..+..++... ...++-.++..+++.++.+..+. ..+|.....+.
T Consensus 126 ~GRvlgGiaTSLLfS~FEsW~V~Eh~~~g~~~~~L~~tF~~~tf~~n~~vAI~aGv~a~~l~~~~~~g~vaPF~~a~~~l 205 (354)
T PF05631_consen 126 LGRVLGGIATSLLFSAFESWMVHEHNKRGFPQEWLSDTFSLATFFGNGVVAIGAGVVANVLADWFGFGPVAPFDAAIVLL 205 (354)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHhHHHHHHHhHHHHHHHHHhCCCCcchHHHHHHHH
Confidence 9999999999988887766543 332 2222233333333 23344455566666677665554 77888777776
Q ss_pred HHHHHHHH-hhccCCcCcCCCCCcchhhhhhhhhhhhhHHhhccccCCCcHHHhhhcHHHHHHHHHHHHHHHHHHHHHh-
Q 014481 280 IAWFSGFK-ILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLS- 357 (423)
Q Consensus 280 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~- 357 (423)
++..++.. ..+|+....... .+.. +... ..++.+.+||+++.+.+...+.-...+.+..
T Consensus 206 ~~~~~~I~~~W~ENyg~~~~~-~~~~------~~~~------------~a~~~i~~d~ril~LG~~qslFE~smy~FVfl 266 (354)
T PF05631_consen 206 AVAAVLILKTWPENYGDTSSS-SSLS------GSFR------------EAWRAILSDPRILLLGLIQSLFEGSMYLFVFL 266 (354)
T ss_pred HHHHHHHHhcccccCCCcccc-cchH------HHHH------------HHHHHHHcCchhHHHHHHHHHHHHHHHHheee
Confidence 66544433 344443321111 0000 0000 0246778899999999999888888877765
Q ss_pred hhhHHHHHhhCCChhhHHHHHHHHHHHHHHHHHHHHHHhHH
Q 014481 358 WLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADN 398 (423)
Q Consensus 358 ~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr 398 (423)
|.|..-.+ -...--|++++.+.++.++|..+..++..+
T Consensus 267 WtPaL~~~---~~~~P~GlIFssFM~a~MlGS~lf~~l~s~ 304 (354)
T PF05631_consen 267 WTPALDPD---DEELPLGLIFSSFMVAMMLGSSLFSRLLSK 304 (354)
T ss_pred eeceecCC---CCCCCchHHHHHHHHHHHHHHHHHHHHHhC
Confidence 45554421 123346889999999999999888766554
No 127
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.57 E-value=1e-13 Score=132.29 Aligned_cols=160 Identities=23% Similarity=0.077 Sum_probs=127.6
Q ss_pred hhhhhhhHHHhhhhhCCCcchhhHHHHHHHHHHHhhhhhhhhHhhHhcCchHHHHHHHHHHHHHHHHHHhhhHHHHHHHH
Q 014481 130 KVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPLLAGFMPGLVLS 209 (423)
Q Consensus 130 ~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 209 (423)
........|.+.++.|.+..+.+++.+...++..++.++.|++.||+|+|+.+.++.+..+++.++. ...++.+.+.+.
T Consensus 236 ~~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 314 (406)
T PRK11551 236 LYFLLNWLPSLLVGQGLSRSQAGLVQIAFNIGGALGSLLIGALMDRLRPRRVVLLIYAGILASLAAL-AAAPSFAGMLLA 314 (406)
T ss_pred HHHHHHHHHHHHHhCCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHH-HhcCcHHHHHHH
Confidence 3344455777777889999999999999999999999999999999999999888766666655544 334455666677
Q ss_pred HHHHHhhcccchHhHHHHHHhcCCCCchhhHHHHHHhhhhhHHHHHHhhHHHhhhccC-chHHHHHHHHHHHHHHHHHHh
Q 014481 210 RVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLG-WESVFYIFGLLGIAWFSGFKI 288 (423)
Q Consensus 210 ~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g-w~~~~~~~~~~~~~~~~~~~~ 288 (423)
.++.|++.+...+...+++.+.+|+++|++++|+.+....+|..+||.++|.+.+..+ |...+++.+...++.++..+.
T Consensus 315 ~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 394 (406)
T PRK11551 315 GFAAGLFVVGGQSVLYALAPLFYPTQVRGTGVGAAVAVGRLGSMAGPLLAGQLLALGRSTVGVIGASIPVILVAALAALL 394 (406)
T ss_pred HHHHHHHHHhHHHHHHHHHHHHcchhhhhhhhhHHHHhhhHHHHHHhhhHhhhhccCCchHHHHHHHHHHHHHHHHHHHH
Confidence 7888888877888889999999999999999999999999999999999999988754 555666665555555544444
Q ss_pred hc
Q 014481 289 LQ 290 (423)
Q Consensus 289 ~~ 290 (423)
+.
T Consensus 395 ~~ 396 (406)
T PRK11551 395 LV 396 (406)
T ss_pred Hh
Confidence 43
No 128
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.56 E-value=1.7e-13 Score=127.74 Aligned_cols=165 Identities=28% Similarity=0.356 Sum_probs=142.1
Q ss_pred HHHHHhhhhhhhhhHHHhhhhh-CCCcchhhHHHHHHHHHHHhhhhhhhhHhhHhcCch-HHHHHHHHHHHHHHHHHHhh
Q 014481 123 FVICNMDKVNLSVAIIPMSHRF-GWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRK-VLQTGVLIWSLATALLPLLA 200 (423)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~-~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~-~~~~~~~~~~~~~~~~~~~~ 200 (423)
.+.............+.+.++. |.+..+.++..+...++..++.++.+++.||+|+|+ .+.++..+..++.++.. ..
T Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-~~ 262 (352)
T cd06174 184 FFLLSFGYYGLLTYLPLYLQEVLGLSAAEAGLLLSLFGLGGILGALLGGLLSDRLGRRRLLLLIGLLLAALGLLLLA-LA 262 (352)
T ss_pred HHHHHhHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHH-Hh
Confidence 3334444555556666655554 899999999999999999999999999999999999 99999888888877764 45
Q ss_pred hHHHHHHHHHHHHHhhcccchHhHHHHHHhcCCCCchhhHHHHHHhhhhhHHHHHHhhHHHhhhccCchHHHHHHHHHHH
Q 014481 201 GFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGI 280 (423)
Q Consensus 201 ~~~~~~~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~~~~~~~~~~ 280 (423)
++.+.+++..++.|++.+...+....++.+..|+++|++.+|+.+....+|..+++.+.+.+.+..+|++.+++.+++.+
T Consensus 263 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~g~l~~~~~~~~~~~~~~~~~~ 342 (352)
T cd06174 263 PSLALLLVALLLLGFGLGFAFPALLTLASELAPPEARGTASGLFNTFGSLGGALGPLLAGLLLDTGGYGGVFLILAALAL 342 (352)
T ss_pred ccHHHHHHHHHHHHHHHhccchhHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcchHHHHHHHHHH
Confidence 55678889999999999999999999999999999999999999999999999999999999998999999999999888
Q ss_pred HHHHHHHh
Q 014481 281 AWFSGFKI 288 (423)
Q Consensus 281 ~~~~~~~~ 288 (423)
+..+..++
T Consensus 343 i~~i~~~~ 350 (352)
T cd06174 343 LAALLLLL 350 (352)
T ss_pred HHHHHhee
Confidence 77665543
No 129
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.56 E-value=2.6e-13 Score=127.96 Aligned_cols=152 Identities=16% Similarity=0.150 Sum_probs=124.7
Q ss_pred hHHH-hhhhhCCCcchhhHHHHHHHHHHHhhhhhhhhHhhHhcCchHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHH
Q 014481 136 AIIP-MSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPLLAGFMPGLVLSRVLVG 214 (423)
Q Consensus 136 ~~~~-~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G 214 (423)
.+|. +.+++|.++.+.+++.+...+...++.++.|++.||+|+|+.+.++.++..+..... ...++.+.+++.+++.|
T Consensus 221 ~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g 299 (375)
T TIGR00899 221 NMPLLIIHELGLPDKLAGLMMGTAAGLEIPFMLLAGYLIKRFGKRRLMLLAALAGVAFYTGL-AADNSLWALLMLQLLNA 299 (375)
T ss_pred hhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhcchhHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHH
Confidence 3444 457789999999998888877788889999999999999999988776655544433 34456677778888999
Q ss_pred hhcccchHhHHHHHHhcCCCCchhhHHHHHHhhhhhHHHHHHhhHHHhhhccCchHHHHHHHHHHHHHHHHHHhh
Q 014481 215 IGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAWFSGFKIL 289 (423)
Q Consensus 215 ~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~~~~~~~~~~~~~~~~~~~ 289 (423)
++.+...+....++.|..| +++++++++++....+|..++|.+++.+.+..||+..|++.+++.++..+...++
T Consensus 300 ~~~g~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~g~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 373 (375)
T TIGR00899 300 IFIGILAGIGMLYFQDLMP-GRAGAATTLYTNTGRVGWIIAGSVGGILAERWSYHAVYWFAIVMLIVALFCLLLI 373 (375)
T ss_pred HHHHHHHHHHHHHHHHhCc-chhhHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHhee
Confidence 9888888888888999887 5677999999999999999999999999999999999999888877766665544
No 130
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=99.56 E-value=3.2e-14 Score=128.55 Aligned_cols=179 Identities=19% Similarity=0.121 Sum_probs=145.0
Q ss_pred hhHHHHHHHHHHHHHHHhhhhhhhhhHHH-hhhhhCCCcchhhHHHHHHHHHHHhhhhhhhhHhhHh--cCchHHHHHHH
Q 014481 111 QRYKLIGTTSLAFVICNMDKVNLSVAIIP-MSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIF--GGRKVLQTGVL 187 (423)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~--G~r~~~~~~~~ 187 (423)
-+.+.++.+++++++.+..++.+....|. +.|..|.|...+++..+.+-++...|.+++|+++||+ |||.+..+...
T Consensus 249 L~Nk~iW~la~a~vfvYivR~gi~dW~p~YL~e~k~~s~~~a~~a~~lfE~agl~G~Ll~GwlSDklfkgrR~p~~~i~~ 328 (448)
T COG2271 249 LKNKLIWLLALANVFVYVVRYGINDWGPLYLSEVKGFSLVKANWAISLFEVAGLPGTLLAGWLSDKLFKGRRGPMALIFM 328 (448)
T ss_pred HcChHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhcCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcccccchHHHHHH
Confidence 34567888999999999999999988887 6677899999999999999999999999999999996 77766655443
Q ss_pred HHHHHHHHHHHhh--hHHHHHHHHHHHHHhhcccchHhHHHHHHhcCCCCchhhHHHHHHhhhhh-HHHHHHhhHHHhhh
Q 014481 188 IWSLATALLPLLA--GFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSF-GSVAGLLLAPPIIE 264 (423)
Q Consensus 188 ~~~~~~~~~~~~~--~~~~~~~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~-g~~~g~~~~~~l~~ 264 (423)
+....+++....+ .+++...++.++.|+..-+-.-.......|..|++--|++.|+...+..+ |...+....+++.|
T Consensus 329 ~~i~~~~~~~w~~~~~~~~l~~~~l~~iGf~IyGPqmLiGl~a~e~~pK~AaGtA~Gf~Glf~Yl~Ga~~a~~~~g~i~d 408 (448)
T COG2271 329 LLITASLVLYWLAPNGSYLLDAILLFIIGFLIYGPQMLIGLAAAEFVPKKAAGTATGFVGLFAYLIGAALAGLPLGYIAD 408 (448)
T ss_pred HHHHHHHHHHHcCCCccHHHHHHHHHHHHHHHhhHHHHHHHHHhccccHhhccchhchhhhHHHHhhHHhcCCcceeeEe
Confidence 3333333332333 34577778888899887777777788889999999999999999999999 99999999999999
Q ss_pred ccCchHHHHHHHHHHHHHHHHHHhh
Q 014481 265 NLGWESVFYIFGLLGIAWFSGFKIL 289 (423)
Q Consensus 265 ~~gw~~~~~~~~~~~~~~~~~~~~~ 289 (423)
.+||...|++..+.++++.++...+
T Consensus 409 ~~gW~g~Fi~~~~~a~l~~lll~~~ 433 (448)
T COG2271 409 TWGWDGGFIVLSIAALLAILLLLPV 433 (448)
T ss_pred cCCCcchHHHHHHHHHHHHHHHHHH
Confidence 9999999999888877765554444
No 131
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.56 E-value=8.2e-14 Score=133.03 Aligned_cols=158 Identities=20% Similarity=0.158 Sum_probs=126.3
Q ss_pred hhhhhhHHHhhhhhCCCcc----hhhHHHHHHHHHHHhhhhhhhhHhhHhcCchHHHHHHHHHHHHHHHHHHhhhHHHHH
Q 014481 131 VNLSVAIIPMSHRFGWNSS----VAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPLLAGFMPGL 206 (423)
Q Consensus 131 ~~~~~~~~~~~~~~~~s~~----~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (423)
....+.++.+..+.+.+.. ..+.+.++..++..++.++.|++.||+|||+.+.++.++..++.+.. ...++.+.+
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 314 (408)
T PRK09874 236 GSIAPILTLYVRELAGNVSNIAFISGMIASVPGVAALLSAPRLGKLGDRIGPEKILITALIFSVLLLIPM-SFVQTPLQL 314 (408)
T ss_pred HHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHH-HHhccHHHH
Confidence 3344455555444433332 24566667778888999999999999999999999888776666554 344556778
Q ss_pred HHHHHHHHhhcccchHhHHHHHHhcCCCCchhhHHHHHHhhhhhHHHHHHhhHHHhhhccCchHHHHHHHHHHHHHHHHH
Q 014481 207 VLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAWFSGF 286 (423)
Q Consensus 207 ~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~~~~~~~~~~~~~~~~ 286 (423)
++.+++.|++.+...+...+++.+..++++||+.+++++....+|..+||.++|.+.+..||++.|++.+++.++..+..
T Consensus 315 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~gp~~~G~l~~~~g~~~~f~~~~~~~l~~~~~~ 394 (408)
T PRK09874 315 GILRFLLGAADGALLPAVQTLLVYNSSNQIAGRIFSYNQSFRDIGNVTGPLMGAAISANYGFRAVFLVTAGVVLFNAVYS 394 (408)
T ss_pred HHHHHHHHhhhHhhHHHHHHHHHHhCCcccceeeehHHHHHHHHHHHhhHHHHHHHHhhcchhHHHHHHHHHHHHHHHHH
Confidence 88899999999999999999999999989999999999999999999999999999999999999999998887766555
Q ss_pred Hhh
Q 014481 287 KIL 289 (423)
Q Consensus 287 ~~~ 289 (423)
++.
T Consensus 395 ~~~ 397 (408)
T PRK09874 395 WNS 397 (408)
T ss_pred HHH
Confidence 443
No 132
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=99.55 E-value=1.6e-13 Score=133.22 Aligned_cols=174 Identities=15% Similarity=0.068 Sum_probs=128.0
Q ss_pred HHHHHHHHHHHHhhhhhhhhhHHH-hhhhhCCCcchhhHHHHHHHHHHHhhhhhhhhHhhHhcCchHHHHHHHHHHHHHH
Q 014481 116 IGTTSLAFVICNMDKVNLSVAIIP-MSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATA 194 (423)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~ 194 (423)
+..+++..++............|. +.+++|++..+.++..+...++..++.+++|+++||+|||+.++....+..++..
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~p~yl~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~g~r~~~~~~~~~~~~~~~ 339 (467)
T PRK09556 260 IWLLCFANIFLYIVRIGIDNWSPVYAFQELGFSKEDAINTFTLFEIGALVGSLLWGWLSDLANGRRALVACIALALIIFT 339 (467)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCchHHHHHHHHHHHHH
Confidence 334444555555555555666775 5567999999999999999999999999999999999999887765544443322
Q ss_pred HHH-HhhhHHHHHHHHHHHHHhhcccchHhHHHHHHhcCCCCchhhHHHHHHhhhhh-HHHHHHhhHHHhhh--------
Q 014481 195 LLP-LLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSF-GSVAGLLLAPPIIE-------- 264 (423)
Q Consensus 195 ~~~-~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~-g~~~g~~~~~~l~~-------- 264 (423)
+.. ...++.+.+.+++++.|++.............|.+|++.||++.|+.+...++ |..++|.+.|.+.+
T Consensus 340 ~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~p~~~~g~a~gi~~~~g~l~g~~~~~~~~G~i~~~~~~g~~~ 419 (467)
T PRK09556 340 LGVYQHATSEYMYLASLFALGFLVFGPQLLIGVAAVGFVPKKAIGVANGIKGTFAYLFGDSFAKVGLGMIADPTKNGTPI 419 (467)
T ss_pred HHHHHhcCcHHHHHHHHHHHHHHHhhHHHHHHHHHHhhcchhhHHHHHHHHHHHHHHHhHHHHhhhHHHHhccccccccc
Confidence 221 22344455667778888654443334446777999999999999999998886 77999999999999
Q ss_pred ----ccCchHHHHHHHHHHHHHHHHHHhh
Q 014481 265 ----NLGWESVFYIFGLLGIAWFSGFKIL 289 (423)
Q Consensus 265 ----~~gw~~~~~~~~~~~~~~~~~~~~~ 289 (423)
..||+..|++.++..++.++..+++
T Consensus 420 ~~~~~~~~~~~f~~~~~~~~~~~~~~~~~ 448 (467)
T PRK09556 420 FGYTLTGWAGTFAALDIAAIGCICLMAIV 448 (467)
T ss_pred ccccccChHHHHHHHHHHHHHHHHHHHHH
Confidence 5689999999877777765555544
No 133
>PRK03545 putative arabinose transporter; Provisional
Probab=99.55 E-value=2.7e-13 Score=128.59 Aligned_cols=153 Identities=18% Similarity=0.095 Sum_probs=123.3
Q ss_pred HHHhhhhhCCCcchhhHHHHHHHHHHHhhhhhhhhHhhHhcCchHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhh
Q 014481 137 IIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPLLAGFMPGLVLSRVLVGIG 216 (423)
Q Consensus 137 ~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~ 216 (423)
.+.+.+.+|.+..+.+++.+...++..++.++.|++.||+|+|+.. .+..+..++........++.+.++++.++.|++
T Consensus 229 ~~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~-~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~g~~ 307 (390)
T PRK03545 229 EPFVQQVAGLSENFATLLLLLFGGAGIIGSVLFSRLGNRHPSGFLL-IAIALLLVCLLLLLPAANSEWHLSVLSIFWGIA 307 (390)
T ss_pred HHHHHHhcCCCccHHHHHHHHHHHHHHHHHHHHHHHhhccchhHHH-HHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHH
Confidence 3445566899999999999999999999999999999999988654 444444444433334456667778888899998
Q ss_pred cccchHhHHHHHHhcCCCCchhhHHHHHHhhhhhHHHHHHhhHHHhhhccCchHHHHHHHHHHHHHHHHHHhhcc
Q 014481 217 EGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAWFSGFKILQE 291 (423)
Q Consensus 217 ~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~~~~~~~~~~~~~~~~~~~~~ 291 (423)
.+...+.....+.+..| ++|++++|+++....+|..+||+++|.+.++.|++..|++.+++.++.++......+
T Consensus 308 ~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~G~~~~G~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 381 (390)
T PRK03545 308 IMCIGLAMQVKVLKLAP-DATDVAMALFSGIFNIGIGAGALLGNQVSLHLGLSSIGYVGAALALAALVWSILIFR 381 (390)
T ss_pred HhcchHHHHHHHHHhCC-CcHHHHHHHHHHHHHHHHHHHHHHHHHHHhccChhHHHHHHHHHHHHHHHHHHHHcc
Confidence 87777777788888776 689999999999999999999999999999999999999998888776665555443
No 134
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.55 E-value=2.4e-13 Score=128.51 Aligned_cols=162 Identities=16% Similarity=0.011 Sum_probs=136.7
Q ss_pred HHHHHHHhhhhhhhhhHHHhhhhhCCCcchhhHHHHHHHHHHHhhhhhhhhHhhHhcCchHHHHHHHHHHHHHHHHHHhh
Q 014481 121 LAFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPLLA 200 (423)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~ 200 (423)
+..++.......+....|.+.+++|.++.++|++.++..++..++.++.+++.||+|+|+.+.++.++.++..++. ...
T Consensus 212 ~~~~l~~~~~~~~~~~~~~~l~~~g~s~~~~g~l~~~~~~~~i~~~~~~~~l~~r~g~~~~l~~~~~~~~~~~~~~-~~~ 290 (382)
T TIGR00902 212 AAVCLIQGAHAAYYGFSAIYWQAAGISASATGLLWGIGVLAEIIIFAFSNKLFQNCSARDLLLISAIACVGRWAII-GAI 290 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCCHhHHHHHHHHHHHHHHHHHHHhHHHHhhCCHHHHHHHHHHHHHHHHHHH-HhH
Confidence 3334444445555556677667899999999999999999999999999999999999999999999988888776 457
Q ss_pred hHHHHHHHHHHHHHhhcccchHhHHHHHHhcCCCCchhhHHHHHH-hhhhhHHHHHHhhHHHhhhccCchHHHHHHHHHH
Q 014481 201 GFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVF-GGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLG 279 (423)
Q Consensus 201 ~~~~~~~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~-~~~~~g~~~g~~~~~~l~~~~gw~~~~~~~~~~~ 279 (423)
++.+.+++.+++.|+..+...+....++.+. |+++|+++.++++ ...++|..+|+.++|++.++.|+ ..|++.+++.
T Consensus 291 ~~~~~~~~~q~l~g~~~~~~~~~~~~~i~~~-~~~~~~~~q~~~~~~~~g~g~~~g~~~~G~l~~~~g~-~~~~~~~~~~ 368 (382)
T TIGR00902 291 EAFPLIFLLQILHCGTFAVCHLAAMRYIAAQ-PGSEIAKLQALYNALAMGGLIAIFTAFAGFIYPTLGA-GTFVFMAIIA 368 (382)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccH-HHHHHHHHHH
Confidence 7778888999999999999999999999998 8889999999986 57889999999999999999986 6677777777
Q ss_pred HHHHHH
Q 014481 280 IAWFSG 285 (423)
Q Consensus 280 ~~~~~~ 285 (423)
++.+++
T Consensus 369 ~~~~~~ 374 (382)
T TIGR00902 369 AAAFFL 374 (382)
T ss_pred HHHHHH
Confidence 655444
No 135
>PRK12382 putative transporter; Provisional
Probab=99.55 E-value=4.3e-13 Score=127.35 Aligned_cols=155 Identities=20% Similarity=0.210 Sum_probs=127.6
Q ss_pred hhhhhHHHhhhhhCCCcchhhHHHHHHHHHHHhhhhhhhhHhhHhcCchHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHH
Q 014481 132 NLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPLLAGFMPGLVLSRV 211 (423)
Q Consensus 132 ~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 211 (423)
......+.+.++.|.+ ..++..+.+.++..+++++.|++.||+|+|+.+.++..+.+++.++. ...++.+.++++.+
T Consensus 234 ~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 310 (392)
T PRK12382 234 VIGTFVSLYFASKGWA--MAGFTLTAFGGAFVLMRVLFGWMPDRFGGVKVAIVSLLVETVGLLLL-WLAPTAWVALAGAA 310 (392)
T ss_pred HHHHHHHHHHHhcCCc--hhHHHHHHHHHHHHHHHHHHHHHHHhcCCCeehHHHHHHHHHHHHHH-HHcccHHHHHHHHH
Confidence 3444455555566654 35666777888889999999999999999999999888877777665 34556677778889
Q ss_pred HHHhhcccchHhHHHHHHhcCCCCchhhHHHHHHhhhhhHHHHHHhhHHHhhhccCchHHHHHHHHHHHHHHHHHHhh
Q 014481 212 LVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAWFSGFKIL 289 (423)
Q Consensus 212 l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~~~~~~~~~~~~~~~~~~~ 289 (423)
+.|++.+...+...+.+.+.+|+++|++++|+++....+|..+||.+.+.+.++.||++.|++.+++.++..+..++.
T Consensus 311 l~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 388 (392)
T PRK12382 311 LTGAGCSLIFPALGVEVVKRVPSQVRGTALGGYAAFQDIAYGVSGPLAGMLATSFGYPSVFLAGAISAVLGIIVTILS 388 (392)
T ss_pred HHHHHHHhHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHhh
Confidence 999998888888888899999999999999999999999999999999999999999999999988877765555443
No 136
>PRK03699 putative transporter; Provisional
Probab=99.54 E-value=4e-13 Score=127.59 Aligned_cols=171 Identities=13% Similarity=0.182 Sum_probs=133.3
Q ss_pred HHHHHHHhhhhhhhhhHHHhh-hhhCCCcchhhHHHHHHHHHHHhhhhhhhhHhhHhcCchHHHHHHHHHHHHHHHHHHh
Q 014481 121 LAFVICNMDKVNLSVAIIPMS-HRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPLL 199 (423)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~~-~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~~ 199 (423)
+..++............|.+. +++|++..+.+++.+.+.++..++.++.|+++||+++|+.+.....+.++...+. ..
T Consensus 212 ~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~-~~ 290 (394)
T PRK03699 212 IAALLYILAQLTFISWVPEYAQKKFGMSLEDAGNLVSNFWMAYMVGMWIFSFIVRFFDLQRILTVLAGLALVLMYLF-VN 290 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCChHHhhHHHHHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHH-HH
Confidence 333333344445556677655 6789999999999999999999999999999999999999988777666655444 34
Q ss_pred hhHHHHHHHHHHHHHhhcccchHhHHHHHHhcCCCCchhhHHHHHHhhhhhHHHHHHhhHHHhhhccCchHHHHHHHHHH
Q 014481 200 AGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLG 279 (423)
Q Consensus 200 ~~~~~~~~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~~~~~~~~~ 279 (423)
.++.+.+.+..++.|++.+..++...++..+..+ +++++..+.......+|..++|.+.|.+.+..||+..+++.+++.
T Consensus 291 ~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~i~p~~~G~l~~~~g~~~~~~~~~~~~ 369 (394)
T PRK03699 291 TDDPSHLLYAILGLGFFSSAIYTTIITLGSQQTK-VASPKLVNFILTCGTIGTMLTFVVTSPIVAHFGLQAALLTANGLY 369 (394)
T ss_pred cCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHcc-CCCHHHHHHHHHhhhHHHHHHHHHHHHHHHHhCchhhhhhhHHHH
Confidence 4555556667788888888788887778787776 567788899889999999999999999999999999999988887
Q ss_pred HHHHHHHHhhccCC
Q 014481 280 IAWFSGFKILQEGE 293 (423)
Q Consensus 280 ~~~~~~~~~~~~~~ 293 (423)
++..+....+++..
T Consensus 370 ~~~~~~~~~~~~~~ 383 (394)
T PRK03699 370 AVVFVMCILLGFVS 383 (394)
T ss_pred HHHHHHHHHHHHHH
Confidence 77765555555433
No 137
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.53 E-value=4.4e-13 Score=127.06 Aligned_cols=168 Identities=14% Similarity=0.081 Sum_probs=120.2
Q ss_pred HHHHHHHHHHhhhhhhhhhHHHh-hhhhCCCcchhhHHHHHHHHHHHhhhhhhhhHhhHhcCchH--HHHH------HHH
Q 014481 118 TTSLAFVICNMDKVNLSVAIIPM-SHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKV--LQTG------VLI 188 (423)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~--~~~~------~~~ 188 (423)
...+..++............|.+ .+++|.+..+.+++.+...++..++.++.|++.||+|||+. .... .++
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (399)
T TIGR00893 219 GLALGQFLVNIGLGFFLTWFPTYLVQERGLSILEAGFMASLPGIVGFIGMILGGRLSDLLLRRGKSLVFARKTAIIAGLV 298 (399)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHHHhcccHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHH
Confidence 34444445555555566666664 56689999999999999999999999999999999999961 1111 111
Q ss_pred HHHHHHHHHHhhhHHHHHHHHHHHHHhhcccchHhHHHHHHhcCCCCchhhHHHHHHhhhhhHHHHHHhhHHHhhhccC-
Q 014481 189 WSLATALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLG- 267 (423)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g- 267 (423)
..+..... ...++.+..+...++.+++.+ ..+...+++.|.+|+++|++++|+.+....+|..++|.+.+.+.+..|
T Consensus 299 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~i~g~l~~~~g~ 376 (399)
T TIGR00893 299 LSLLMFAT-NYVNIPYAALALVALGFFGLG-AGAIGWALISDNAPGNIAGLTGGLINSLGNLGGIVGPIVIGAIAATTGS 376 (399)
T ss_pred HHHHHHHh-ccchhHHHHHHHHHHHHhchh-hhhHHHHHHHhhcChhHHHHHHHHHHHHHHHhhhhhhHHhhhhccCCCc
Confidence 11111111 112233333333444444444 788899999999999999999999999999999999999999999988
Q ss_pred chHHHHHHHHHHHHHHHHHH
Q 014481 268 WESVFYIFGLLGIAWFSGFK 287 (423)
Q Consensus 268 w~~~~~~~~~~~~~~~~~~~ 287 (423)
|++.|++.+++.++..+..+
T Consensus 377 ~~~~~~~~~~~~~~~~~~~~ 396 (399)
T TIGR00893 377 FAGALMVVAALALIGALSYL 396 (399)
T ss_pred hhHHHHHHHHHHHHHHHHHH
Confidence 99999988888776655443
No 138
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.53 E-value=6.8e-13 Score=125.48 Aligned_cols=153 Identities=16% Similarity=0.152 Sum_probs=125.1
Q ss_pred hhhhHHHhhhhhCCCcchhhHHHHHHHHHHHhhhhhhhhHhhHhcCchHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHH
Q 014481 133 LSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPLLAGFMPGLVLSRVL 212 (423)
Q Consensus 133 ~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 212 (423)
...++|.+.++.|.+..+.++..+...++..+++++.|++.||+|+|+++..+..+.+++.+.. . .. ...+.+.++
T Consensus 219 ~~~~lp~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~--~-~~-~~~~~~~~l 294 (381)
T PRK03633 219 LYGLMPLYLNHQGMSDASIGFWMALLVSAGILGQWPIGRLADRFGRLLVLRVQVFVVILGSIAM--L-SQ-AAMAPALFI 294 (381)
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHcCcHHHHHHHHHHHHHHHHHH--h-hh-HHHHHHHHH
Confidence 3345677777789999999999999999999999999999999999999988877777665443 1 22 334456677
Q ss_pred HHhhcccchHhHHHHHHhcCCCCchhhHHHHHHhhhhhHHHHHHhhHHHhhhccCchHHHHHHHHHHHHHHHHHHhh
Q 014481 213 VGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAWFSGFKIL 289 (423)
Q Consensus 213 ~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~~~~~~~~~~~~~~~~~~~ 289 (423)
.|++.....|...+.+.|..|+++++.+.+.+....++|..+||.++|++.++.||++.|.+.+.+.++..+..+..
T Consensus 295 ~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~igp~~~G~l~~~~g~~~~f~~~~~~~l~~~~~~~~~ 371 (381)
T PRK03633 295 LGAAGFTLYPVAMAWACEKVEHHELVAMNQALLLSYTVGSLLGPSFTAMLMQNYSDNLLFIMIASVSFIYLLMLLRK 371 (381)
T ss_pred HHHHHHhHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHHHhc
Confidence 78877777899999999999888888888888899999999999999999999999999999888877665444443
No 139
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=99.51 E-value=9.1e-13 Score=120.61 Aligned_cols=176 Identities=17% Similarity=0.140 Sum_probs=144.9
Q ss_pred HHHHHHHHHHHHHHhhhhhhhhhHHHhhhhhCCCcchhhHHHHHHHHHHHhhhhhhhhHhhHhcCchHHHHHHHHHHHHH
Q 014481 114 KLIGTTSLAFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLAT 193 (423)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~ 193 (423)
.+...+....+........+...-|.+++..|++.+.++++...+.++..+|..+.|++.|| +.|+.+.....+.++..
T Consensus 212 ~v~~~l~~t~l~~~g~F~~ftYi~P~L~~v~g~s~~~vs~~Ll~~Gv~~~~Gn~~gGrl~dr-~~~~~l~~~~~l~a~~~ 290 (394)
T COG2814 212 GVLLGLLATFLFMTGHFALYTYIRPFLESVAGFSVSAVSLVLLAFGIAGFIGNLLGGRLADR-GPRRALIAALLLLALAL 290 (394)
T ss_pred hHHHHHHHHHHHHcchhhhHHhHHHHHHHccCCCHhHHHHHHHHHHHHHHHHHHHHhhhccc-cchhHHHHHHHHHHHHH
Confidence 44444444444444445566666777888899999999999999999999999999999999 99999999988888888
Q ss_pred HHHHHhhhHHHHHHHHHHHHHhhcccchHhHHHHHHhcCCCCchhhHHHHHHhhhhhHHHHHHhhHHHhhhccCchHHHH
Q 014481 194 ALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFY 273 (423)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~~~ 273 (423)
+.+.+..++.+..++.-++.|+..+.........+++ .-++.++.+.+++....++|..+|..++|.+.+++|+....+
T Consensus 291 l~l~~~~~~~~~~~~~~~~wg~a~~~~~~~~~~~~a~-~~p~~~~~a~sl~~aa~nlgia~GA~lGG~v~~~~g~~~~~~ 369 (394)
T COG2814 291 LALTFTGASPALALALLFLWGFAFSPALQGLQTRLAR-LAPDAADLAGSLNVAAFNLGIALGAALGGLVLDALGYAATGW 369 (394)
T ss_pred HHHHHhcchHHHHHHHHHHHHHHhhhhhhHHHHHhcc-cCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHH
Confidence 7776777777777777788888887777777777777 445899999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhcc
Q 014481 274 IFGLLGIAWFSGFKILQE 291 (423)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~ 291 (423)
+.+++.++.++..+...+
T Consensus 370 ~~a~l~~~a~~~~~~~~~ 387 (394)
T COG2814 370 VGAALLLLALLLALLSAR 387 (394)
T ss_pred HHHHHHHHHHHHHHHHHh
Confidence 999998887666655443
No 140
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=99.51 E-value=2.1e-12 Score=122.49 Aligned_cols=162 Identities=14% Similarity=0.032 Sum_probs=123.9
Q ss_pred HHhhhhhhhhhHHHhhhhhCCCcchhhHHHHHHHHHHHhhhhhhhhHhhHhcCchHHHHHHHHHHHHHHHHHHhhhHHHH
Q 014481 126 CNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPLLAGFMPG 205 (423)
Q Consensus 126 ~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (423)
............|.+.+++|.+..+.|...+.+.++..++.++.|++.||+|||+.+.++..+..++.++......+...
T Consensus 217 ~~~~~~~~~~~lp~~l~~~g~s~~~ag~~~~~~~i~~i~g~~~~g~l~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 296 (393)
T PRK09705 217 INGGYASLIAWLPAFYIEIGASAQYSGSLLALMTLGQAAGALLMPAMARHQDRRKLLMLALVLQLVGFCGFIWLPLQLPV 296 (393)
T ss_pred HHHHHHHHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHHHHccchHHH
Confidence 33444455556677666789999999999999999999999999999999999999988877776666544323333222
Q ss_pred HHHHHHHHHhhcccchHhHHHHHHhcCC-CCchhhHHHHHHhhhhhHHHHHHhhHHHhhhccC-chHHHHHHHHHHHHHH
Q 014481 206 LVLSRVLVGIGEGVSPSAATDLIARSIP-LEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLG-WESVFYIFGLLGIAWF 283 (423)
Q Consensus 206 ~~~~~~l~G~~~~~~~~~~~~~i~~~~~-~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g-w~~~~~~~~~~~~~~~ 283 (423)
+ ..++.|++.+...+.......+..+ ++++++.+|+.+....++..+||.+.|++.+..| |...|.+.++..++..
T Consensus 297 ~--~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~gp~~~G~l~~~~g~~~~~~~~~~~~~~~~~ 374 (393)
T PRK09705 297 L--WAMVCGLGLGGAFPLCLLLALDHSVQPAIAGKLVAFMQGIGFIIAGLAPWFSGVLRSISGNYLMDWAFHALCVVGLM 374 (393)
T ss_pred H--HHHHHHHhccchHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHH
Confidence 2 2345688888888877777777775 5689999999999999999999999999999876 7777777776666554
Q ss_pred HHHHhh
Q 014481 284 SGFKIL 289 (423)
Q Consensus 284 ~~~~~~ 289 (423)
+....+
T Consensus 375 ~~~~~~ 380 (393)
T PRK09705 375 IITLRF 380 (393)
T ss_pred HHHHHh
Confidence 443333
No 141
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.51 E-value=5.5e-13 Score=130.73 Aligned_cols=149 Identities=16% Similarity=0.148 Sum_probs=115.8
Q ss_pred hhhhHHHhh-hhhCCCcchhhHHHHHHHHHHHhhhhhhhhHhhHhcCchHHHHHHHHHHHHHHHHHHh-hhHHHHHHHHH
Q 014481 133 LSVAIIPMS-HRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPLL-AGFMPGLVLSR 210 (423)
Q Consensus 133 ~~~~~~~~~-~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 210 (423)
....+|.+. +++|.+..+.+++.+...++..++.++.|+++||+|||++++++.++.++..++.... ..+.+.+.+..
T Consensus 294 ~~~~lp~~l~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 373 (496)
T PRK03893 294 IQALLPTYLKTDLGYDPHTVANVLFFSGFGAAVGCCVGGFLGDWLGTRKAYVCSLLISQLLIIPVFAIGGANVWVLGLLL 373 (496)
T ss_pred HHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHhhccccHHHHHHHHH
Confidence 445667765 5899999999999999999999999999999999999999988876665554433222 23333444444
Q ss_pred HHHHhhcccchHhHHHHHHhcCCCCchhhHHHHHHhhhhhHHHHHHhhHHHhhhccCchHHHHHHHHHHHH
Q 014481 211 VLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIA 281 (423)
Q Consensus 211 ~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~~~~~~~~~~~ 281 (423)
++.++......+....++.+.+|+++|++++|+++....+|..+||+++|.+.+..||+..+.+.+....+
T Consensus 374 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~lgp~l~g~l~~~~g~~~~~~~~~~~~~~ 444 (496)
T PRK03893 374 FFQQMLGQGISGLLPKLIGGYFDTEQRAAGLGFTYNVGALGGALAPILGALIAQRLDLGTALASLSFSLTF 444 (496)
T ss_pred HHHHHHhcccchhhHHHHHhhCCHHHhhcccchhhhhhhHHHHHHHHHHHHHhccCChHHHHHHHHHHHHH
Confidence 54444333445667788999999999999999999999999999999999999999999888766554433
No 142
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.50 E-value=5.1e-12 Score=123.12 Aligned_cols=156 Identities=12% Similarity=0.088 Sum_probs=120.5
Q ss_pred HHHhhhhhCCCcchhhHHHH-HHHHHHHhhhhhhhhHhhHhcCchHHHHHHHHHHHHHHHHH---HhhhHHHHHHHHHHH
Q 014481 137 IIPMSHRFGWNSSVAGLVQS-SFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLP---LLAGFMPGLVLSRVL 212 (423)
Q Consensus 137 ~~~~~~~~~~s~~~~~~~~~-~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~l 212 (423)
.|.+.+++|.+..+++++.. ...++..++.+++|+++||+|+|+.+.++.++.++..+++. ...++.+.+.+..++
T Consensus 246 ~~~l~~~~G~s~~~~g~~~~~~g~i~~iiG~ll~G~L~dr~g~~~~l~i~~~l~~l~~l~~~~l~~~~~~~~~l~~~~~l 325 (491)
T PRK11010 246 TTFLIRGVGFDAGEVGLVNKTLGLLATIVGALYGGILMQRLSLFRALMIFGILQGVSNAGYWLLSITDKNLYSMGAAVFF 325 (491)
T ss_pred HHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHH
Confidence 34456678999999999974 66689999999999999999999988776665454433221 112343444445566
Q ss_pred HHhhcccchHhHHHHHHhcCCCCchhhHHHHHHhhhhhHHHHHHhhHHHhhhccCchHHHHHHHHHHHHHHHHHHhhccC
Q 014481 213 VGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAWFSGFKILQEG 292 (423)
Q Consensus 213 ~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~ 292 (423)
..++.+...+...++..+..+++.+++.+++.+...++|..+++.++|.+.+..||+..|.+.++++++.++....++++
T Consensus 326 ~~~~~g~~~~~~~a~~~~l~~~~~~~t~~gl~~s~~~lg~~~~~~~~G~l~~~~G~~~~f~~~~~~~l~~l~~~~~~~~~ 405 (491)
T PRK11010 326 ENLCGGMGTAAFVALLMTLCNKSFSATQFALLSALSAVGRVYVGPVAGWFVEAHGWPTFYLFSVAAAVPGLLLLLVCRQT 405 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 55555555666788888999989999999999999999999999999999999999999999888888877666666543
No 143
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=99.50 E-value=4.4e-13 Score=129.63 Aligned_cols=176 Identities=14% Similarity=0.041 Sum_probs=118.6
Q ss_pred HHHHHHHHHhhhhhhhhhHHHhh-hhhCCCcchhhHHHHHHHHHHHhhhhhhhhHhhHh--cCchHHH-HHHHHHHHHHH
Q 014481 119 TSLAFVICNMDKVNLSVAIIPMS-HRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIF--GGRKVLQ-TGVLIWSLATA 194 (423)
Q Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~--G~r~~~~-~~~~~~~~~~~ 194 (423)
..+..++.....+.....+|.+. ++.|.+..+.+++...+.++..++.++.|+++||+ +||+... ....+..++.+
T Consensus 258 ~~l~~~~~~~~~~~~~~~~P~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~G~l~dr~~~~r~~~~~~~~~~l~~~~~~ 337 (452)
T PRK11273 258 IAIANVFVYLLRYGILDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFRGNRGATGVFFMTLVTIATI 337 (452)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCcchHHHHHHHHHHHHHH
Confidence 33444344444445556777755 45789989999999999999999999999999999 5554332 22223233322
Q ss_pred HHHHh-hhHHHHHHHHHHHHHhhcccchHhHHHHHHhcCCCCchhhHHHHHHhhhhhHHH-HHHhhHHHhhhccCchHHH
Q 014481 195 LLPLL-AGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSV-AGLLLAPPIIENLGWESVF 272 (423)
Q Consensus 195 ~~~~~-~~~~~~~~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~-~g~~~~~~l~~~~gw~~~~ 272 (423)
+.... ..+.+..+++.++.|.+..........+..|.+|+++||+++|+.+....+|+. +||.+.|.+.+..||+..|
T Consensus 338 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~g~~v~g~l~~~~g~~~~f 417 (452)
T PRK11273 338 VYWLNPAGNPTVDMACMIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFGWDGGF 417 (452)
T ss_pred HHHHhcccChHHHHHHHHHHHHHHHhHHHHHHHHHHHHcChhhhhhHHHHHHHHHHHHHHHhhhhhHHHHHHHhcchHHH
Confidence 22111 223334444555555543333333445677999999999999999988888765 4899999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhccCCc
Q 014481 273 YIFGLLGIAWFSGFKILQEGET 294 (423)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~ 294 (423)
++.++.+++.++....+...++
T Consensus 418 ~~~~~~~~~~~~~~~~~~~~~~ 439 (452)
T PRK11273 418 MVMIGGSILAVILLIVVMIGEK 439 (452)
T ss_pred HHHHHHHHHHHHHHHHHhcccc
Confidence 9988887777666555544443
No 144
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=99.50 E-value=7.3e-13 Score=129.00 Aligned_cols=177 Identities=16% Similarity=0.102 Sum_probs=131.8
Q ss_pred HHHHHHHHHHHHHHHhhhhhhhhhHHHhhhhhCCCcchhhHHHHHHHHHHHhhhhhhhhHhhHhcCchHHHHHHHHHHHH
Q 014481 113 YKLIGTTSLAFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLA 192 (423)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~ 192 (423)
+..+....+..+.............|.+.+++|.+..+.++......++..++.++.|+++||+|||+.+.++.++.+++
T Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~ 362 (481)
T TIGR00879 283 RRLFLGVVLQWFQQFTGINAIMYYSPTIFENAGVSTDHAFLVSIIVGAVNFAFTFVAIFLVDRFGRRPLLLIGAAGMAIC 362 (481)
T ss_pred HHHHHHHHHHHHHHHhCCeehHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHH
Confidence 34444444455544444555566678888889999988899999999999999999999999999999999988777776
Q ss_pred HHHHHHh----hh------HHHHHHHHHHHHHhhcccchHhHHHHHHhcCCCCchhhHHHHHHhhhhhHHHHHHhhHHHh
Q 014481 193 TALLPLL----AG------FMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPI 262 (423)
Q Consensus 193 ~~~~~~~----~~------~~~~~~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l 262 (423)
.+++... .+ +...+....++.+.......+....++.|.+|+++|++++++.+...++|.+++|.+.+.+
T Consensus 363 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~lg~~i~~~~~~~~ 442 (481)
T TIGR00879 363 LFVLGILGASFVTGSSKSSGNVAIVFILLFIAFFAMGWGPVPWVIVSEIFPLSLRPKGISIAVAANWLANFIVGFLFPTM 442 (481)
T ss_pred HHHHHHHhhcccCCcccchhHHHHHHHHHHHHHHHccccCeehhhhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6555311 11 2222222333333222333466677889999999999999999999999999999999999
Q ss_pred hhccCchHHHHHHHHHHHHHHHHHHhh
Q 014481 263 IENLGWESVFYIFGLLGIAWFSGFKIL 289 (423)
Q Consensus 263 ~~~~gw~~~~~~~~~~~~~~~~~~~~~ 289 (423)
.+..+|++.|++.++++++.++..+++
T Consensus 443 ~~~~~~~~~f~~~~~~~~~~~i~~~~~ 469 (481)
T TIGR00879 443 LESIGVGGVFIFFGGLNVLGLIFVYFF 469 (481)
T ss_pred HHhcCccceehhHHHHHHHHHHHHhee
Confidence 998899999999888877766555443
No 145
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.50 E-value=1.6e-12 Score=123.82 Aligned_cols=167 Identities=14% Similarity=0.121 Sum_probs=126.6
Q ss_pred HHHHHHHhhhhhhhhhHHHhhhhhCCCcchhhHHHHHHHHHHHhhhhhhhhHhhHhcCchHHH-HHHHHHHHHHHHHHHh
Q 014481 121 LAFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQ-TGVLIWSLATALLPLL 199 (423)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~-~~~~~~~~~~~~~~~~ 199 (423)
+..++............|.+.+++|.+..+.+++.+...++..++.++.|+++||+|||+.+. .+.+..++..+.+...
T Consensus 229 ~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~l~~~~~~~~l~~~ 308 (402)
T TIGR00897 229 MVRIINTIGLFGFAVFLPMFVAELGFSTSEWLQIWGTFFFTNIVFNVIFGIVGDKLGWMNTVRWFGGVGCGIFTLALYYI 308 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHH
Confidence 334444444555566778877889999999999999999999999999999999999988764 3333333332222111
Q ss_pred ----hhHHHHHHHHHHHHHhhcccchHhHHHHHHhcCCCCchhhHHHHHHhhhhhHHHHHHhhHHHhhhccCchHHHHHH
Q 014481 200 ----AGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIF 275 (423)
Q Consensus 200 ----~~~~~~~~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~~~~~ 275 (423)
.++.+.++++.++.|++.+...+ ....+.+..| ++|++++|+.+....+|..++|.+++.+.+..||...+++.
T Consensus 309 ~~~~~~~~~~~~~~~~~~G~~~~~~~~-~~~~~~~~~~-~~~g~~~g~~~~~~~lg~~~gp~i~g~l~~~~g~~~~~~~~ 386 (402)
T TIGR00897 309 PQHFGHSFAVALIIAIALGIFLAGYVP-LAAVFPTLAP-KHKGAAMSVLNLSAGLSAFLAPAIAVLFIGFFGAIGVVWIF 386 (402)
T ss_pred HHccCCcHHHHHHHHHHHHHHHHHHHH-HHHHHHhhCc-chhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHH
Confidence 23456667788888888776544 4556667655 68999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhh
Q 014481 276 GLLGIAWFSGFKIL 289 (423)
Q Consensus 276 ~~~~~~~~~~~~~~ 289 (423)
+++.++..+...++
T Consensus 387 a~~~~i~~~~~~~~ 400 (402)
T TIGR00897 387 AALYVVSAFLTAFI 400 (402)
T ss_pred HHHHHHHHHHHHHh
Confidence 98887766665554
No 146
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.50 E-value=2.1e-13 Score=129.35 Aligned_cols=162 Identities=15% Similarity=0.136 Sum_probs=123.1
Q ss_pred HHHHHHHHHhhhhhhhhhHHHhh-hhhCCCcchhhHHHHHHHHHHHhhhhhhhhHhhHhcCchHHHHHHHHHHHHH-HHH
Q 014481 119 TSLAFVICNMDKVNLSVAIIPMS-HRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLAT-ALL 196 (423)
Q Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~-~~~ 196 (423)
.....+.............|.+. +++|.+..+.++..+...++..++.++.|+++||+|||+.+..+..+..+.. .+.
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~ 303 (394)
T TIGR00883 224 GLGLVIATTTTFYLITTYLPTYLTQTLGLSANSALLVLMLSLILFFITIPLSGALSDRIGRRPVLIIFTVLAALLAVPLL 303 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHH
Confidence 33344444444555556666654 6789999999999999999999999999999999999998876554443332 122
Q ss_pred HHh--hhHHHHHHHHHHHHHhhcccchHhHHHHHHhcCCCCchhhHHHH-HHhhhhhHHHHHHhhHHHhhhccC-chHHH
Q 014481 197 PLL--AGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSF-VFGGLSFGSVAGLLLAPPIIENLG-WESVF 272 (423)
Q Consensus 197 ~~~--~~~~~~~~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~-~~~~~~~g~~~g~~~~~~l~~~~g-w~~~~ 272 (423)
... .++.+.+++..++.|++.+...+...+++.|.+|+++|++++++ ++....+|..++|.++|.+.++.| |++.+
T Consensus 304 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~g~~~~p~~~g~l~~~~g~~~~~~ 383 (394)
T TIGR00883 304 MALLDSGSFTLFFFLVLGLALIGGMYTGPMGSFLPELFPTEVRYTGASLAYNLAGAIFGGFAPYIAAALVAMTGDWYAIG 383 (394)
T ss_pred HHHhcCCchHHHHHHHHHHHHHHHHHhhhHHHHHHHhCCccceeeEeeehhHhHHHHHhhHHHHHHHHHHHHcCcchhHH
Confidence 112 24556666777888888888889999999999999999999998 456677899999999999999888 88877
Q ss_pred HHHHHHHH
Q 014481 273 YIFGLLGI 280 (423)
Q Consensus 273 ~~~~~~~~ 280 (423)
+..++..+
T Consensus 384 ~~~~~~~l 391 (394)
T TIGR00883 384 YYLAALAL 391 (394)
T ss_pred HHHHHHHH
Confidence 76655443
No 147
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.49 E-value=1.6e-13 Score=132.65 Aligned_cols=162 Identities=18% Similarity=0.172 Sum_probs=126.9
Q ss_pred HHHHHHhhhhhhhhhHHHhhhhhCCCcchhhHHHHHHHHHHHhhhhhhhhHhhHh--cCchHHHHH--HHHHHHHHHHHH
Q 014481 122 AFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIF--GGRKVLQTG--VLIWSLATALLP 197 (423)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~--G~r~~~~~~--~~~~~~~~~~~~ 197 (423)
..++..+........++.+.+++|.+..+.+++.++..++..++.++.|++.||. ++|+...++ .++.+++.+++
T Consensus 249 ~~~l~~~~~~~~~~~l~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~l~~ll~- 327 (455)
T TIGR00892 249 GNVIMFLGFFAPIIFLVPYAKDKGVDEYEAAFLLSIIGFVDIFARPSCGLIAGLKWIRPHVQYLFSFALLFNGLTHLLC- 327 (455)
T ss_pred HHHHHHHHccchHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCHHHHHHHHHHHHHHHHHHHHH-
Confidence 3334444444455566777778899999999999999999999999999999974 344434333 23333333333
Q ss_pred HhhhHHHHHHHHHHHHHhhcccchHhHHHHHHhcCCCCchhhHHHHHHhhhhhHHHHHHhhHHHhhhcc-CchHHHHHHH
Q 014481 198 LLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENL-GWESVFYIFG 276 (423)
Q Consensus 198 ~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~-gw~~~~~~~~ 276 (423)
...++++.+++.+++.|++.+...+...+++.+.+|++++++++|+++....+|..+||.++|.+.+.. +|++.|++.+
T Consensus 328 ~~~~~~~~~~i~~~~~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~igp~i~G~l~~~~g~~~~~f~~~~ 407 (455)
T TIGR00892 328 ALAGDYTGLVIYCIFFGLSFGSVGALLFEVLMDLVGAQRFSSAVGLVTIVECCAVLIGPPLAGRLVDATKNYKYIFYASG 407 (455)
T ss_pred HHhchHHHHHHHHHHHHHHhchHHHHHHHHHHHHhhHHHHhhHHhHHHHHHHHHHHccccceeeeehhcCCcchHHHHhh
Confidence 345667788889999999999999999999999999999999999999999999999999999999877 5999999988
Q ss_pred HHHHHHHH
Q 014481 277 LLGIAWFS 284 (423)
Q Consensus 277 ~~~~~~~~ 284 (423)
++.++..+
T Consensus 408 ~~~li~~~ 415 (455)
T TIGR00892 408 SIVVSAGL 415 (455)
T ss_pred HHHHHHHH
Confidence 87665543
No 148
>PRK11663 regulatory protein UhpC; Provisional
Probab=99.49 E-value=1.2e-12 Score=125.86 Aligned_cols=172 Identities=14% Similarity=0.018 Sum_probs=116.3
Q ss_pred HHHHHHHHHhhhhhhhhhHHHhh-hhhCCCcchhhHHHHHHHHHHHhhhhhhhhHhhHh--cCchHH-HHHHHHHHHHHH
Q 014481 119 TSLAFVICNMDKVNLSVAIIPMS-HRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIF--GGRKVL-QTGVLIWSLATA 194 (423)
Q Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~--G~r~~~-~~~~~~~~~~~~ 194 (423)
+.+..+............+|.+. +++|++..+.++..+.+.++..++.++.|+++||+ ++|+.. ....+...+...
T Consensus 248 ~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~a~~~~~~~~~~~~~g~~~~g~l~dr~~~~~r~~~~~~~~~~~~~~~~ 327 (434)
T PRK11663 248 LSFSYVLVYVVRAAINDWGNLYMSETLGVDLVTANSAVSMFELGGFIGALVAGWGSDKLFNGNRGPMNLIFAAGILLSVG 327 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHHHhhhHHHhccCCccHHHHHHHHHHHHHHH
Confidence 33334444444445555666655 67899999999999999999999999999999999 333332 221111111111
Q ss_pred HHH-HhhhHHHHHHHHHHHHHhhcccchHhHHHHHHhcCCCCchhhHHHHHHhhhhhHHHHHHhhHHHhhhccCchHHHH
Q 014481 195 LLP-LLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFY 273 (423)
Q Consensus 195 ~~~-~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~~~ 273 (423)
... ....+.....+..+..|++...........+.|.+|+++|++++|+.+....+|..++|.+.+++.+..||+..|+
T Consensus 328 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~p~~~g~l~~~~g~~~~f~ 407 (434)
T PRK11663 328 SLWLMPFASYVMQAACFFTIGFFVFGPQMLIGMAAAECSHKEAAGAATGFVGLFAYLGAALSGYPLAKVLEIWHWTGFFV 407 (434)
T ss_pred HHHHcccccHHHHHHHHHHHHHHHhhHHHHHHHHHHhcccHhhHHhHHHHHHHHHHHHHHHhcccHHHHHHhcccHHHHH
Confidence 111 1122223333344445544332233344567899998999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhc
Q 014481 274 IFGLLGIAWFSGFKILQ 290 (423)
Q Consensus 274 ~~~~~~~~~~~~~~~~~ 290 (423)
+.++++++..+......
T Consensus 408 ~~~~~~~~~~~~~~~~~ 424 (434)
T PRK11663 408 VISIAAGISALLLLPFL 424 (434)
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 99888877665554443
No 149
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.49 E-value=1.4e-12 Score=124.87 Aligned_cols=160 Identities=19% Similarity=0.115 Sum_probs=131.2
Q ss_pred hhhhHHHhhhh-hCCCcchhhHHHHHHHHHHHhhhhhhhhHhhHhcCchHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHH
Q 014481 133 LSVAIIPMSHR-FGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPLLAGFMPGLVLSRV 211 (423)
Q Consensus 133 ~~~~~~~~~~~-~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 211 (423)
.....|.+.++ +|.+..+.|++.+...++..++.++.+++.||.++++.+..+.++.+++.++. ...++.+..+++.+
T Consensus 242 ~~~~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 320 (417)
T PRK10489 242 VRVLYPALADEVWQMGAAQIGLLYAAVPLGAALGALTSGWLAHSARPGLLMLLSTLGSFLAVGLF-GLMPMWILAVLCLA 320 (417)
T ss_pred HHHhhHHHHHhccCCChhHhHHHHHHHHHHHHHHHHHHHHhhhccCcchHHHHHHHHHHHHHHHH-HccchHHHHHHHHH
Confidence 34456666555 89999999999999999999999999999999888888888877777776555 35566667778888
Q ss_pred HHHhhcccchHhHHHHHHhcCCCCchhhHHHHHHhhhhhHHHHHHhhHHHhhhccCchHHHHHHHHHHHHH-HHHHHhhc
Q 014481 212 LVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAW-FSGFKILQ 290 (423)
Q Consensus 212 l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~~~~~~~~~~~~-~~~~~~~~ 290 (423)
+.|++.+...+...+++.+..|++.||+++|+++....+|..+||.+.|.+.+..|++..+++.++..++. .+....++
T Consensus 321 ~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~l~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 400 (417)
T PRK10489 321 LFGYLSAISSLLQYTLLQTQTPDEMLGRINGLWTAQNVTGDAIGAALLGGLGAMMTPVASASASGFGLLIIGVLLLLVLG 400 (417)
T ss_pred HHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHhhhHhHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHhcc
Confidence 89998887777788899999998999999999999999999999999999999999998888877776554 44444445
Q ss_pred cCC
Q 014481 291 EGE 293 (423)
Q Consensus 291 ~~~ 293 (423)
+.+
T Consensus 401 ~~~ 403 (417)
T PRK10489 401 ELR 403 (417)
T ss_pred ccc
Confidence 443
No 150
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=99.48 E-value=4.3e-13 Score=127.80 Aligned_cols=142 Identities=11% Similarity=0.116 Sum_probs=115.3
Q ss_pred hhhhHHH-hhhhhCCCcchhhHHHHHHHHHHHhhhhhhhhHhhHhcCchHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHH
Q 014481 133 LSVAIIP-MSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPLLAGFMPGLVLSRV 211 (423)
Q Consensus 133 ~~~~~~~-~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 211 (423)
.....|. +.+++|.+..+.+++.+...++..++.++.|++.||+|||+.+.++.++.++..+......++.+.+.+..+
T Consensus 257 ~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 336 (405)
T TIGR00891 257 IQDLLPTYLKADLGLSPHTVANIVVFSNIGAIVGGCVFGFLGDWLGRRKAYVCSLLAGQLLIIPVFAIGANVAVLGLGLF 336 (405)
T ss_pred hhhhhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchhhhHHHHHHHHHHHHHHHHhCCchHHHHHHHH
Confidence 3344454 556789999999999999999999999999999999999999988877654433333233445556666667
Q ss_pred HHHhhcccchHhHHHHHHhcCCCCchhhHHHHHHhhhhhHHHHHHhhHHHhhhccC-chHHHHH
Q 014481 212 LVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLG-WESVFYI 274 (423)
Q Consensus 212 l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g-w~~~~~~ 274 (423)
+.|++.+...+...+++.|.+|+++|++++|+.+....+|..++|+++|.+.++.| |+..+..
T Consensus 337 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~g~~~~g~l~~~~g~~~~~~~~ 400 (405)
T TIGR00891 337 FQQMLVQGIWGILPKHLGEYFPTDQRAAGLGFTYQLGNLGGALAPIIGALLAQRLDEYGTALAS 400 (405)
T ss_pred HHHHHHccchhhHHHHHhhhCCcchhHHHhhHHHHHHHHHHHHHHHHHHHHHHhccccchhHHh
Confidence 77777777778888999999999999999999999999999999999999999988 8776654
No 151
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=99.47 E-value=7e-12 Score=114.03 Aligned_cols=241 Identities=19% Similarity=0.189 Sum_probs=172.2
Q ss_pred hhhhhCCCcchhhHHHHHHHHHHHhhhhhhhhHhhHhc-----CchHHHHH-HHHHHHHHHHHH----Hhhh--------
Q 014481 140 MSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFG-----GRKVLQTG-VLIWSLATALLP----LLAG-------- 201 (423)
Q Consensus 140 ~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G-----~r~~~~~~-~~~~~~~~~~~~----~~~~-------- 201 (423)
+..|+++.....+.+.++..+... ..+.+|+.+|+.+ ||..+++. .++.+.+..+.. ....
T Consensus 6 MIvEL~vpA~lv~~lval~~~~ap-~R~~~G~~SD~~~s~~G~rRtPyI~~G~~~~~~g~~~ap~a~~~l~~~~~~~~~~ 84 (403)
T PF03209_consen 6 MIVELGVPAWLVALLVALHYLVAP-LRVWFGHRSDTHPSILGWRRTPYIWGGTLLQAGGLAIAPFALLLLAESGQQSSGP 84 (403)
T ss_pred HHHHhccHHHHHHHHHHHHHHHHH-HHHHhccccccCcccCcCCchhhhHHHHHHHHHHHHHHHHHHHHHcccccccccc
Confidence 566889988888888888777664 6899999999999 88777765 334333332221 1122
Q ss_pred HH-H--HHHHHHHHHHhhcccchHhHHHHHHhcCCCCchhhHHHHHHhhhhhHHHHHHhhHHHhhhccCchHH---HHHH
Q 014481 202 FM-P--GLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESV---FYIF 275 (423)
Q Consensus 202 ~~-~--~~~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~---~~~~ 275 (423)
.+ + ...+...+.|+|.+...+...++++|..|+++|+++.++...+.-+|.+++..+.+.+.+.+...-. +...
T Consensus 85 ~~~g~~~a~l~F~l~G~G~~~s~T~~lALl~D~~~e~~R~~~v~ivw~Mli~G~iv~ai~~g~lL~~~s~~rL~~v~~~~ 164 (403)
T PF03209_consen 85 FWLGLALAALAFLLYGLGVHASGTSFLALLADLAPEERRPRVVAIVWVMLIVGIIVSAIVFGRLLDPFSPERLIQVIQGV 164 (403)
T ss_pred cHHHHHHHHHHHHHHHhhHhHhHHHHHHHHHhcCCHhhhhhhHHHHHHHHHHHHHHHHHHHHHHccccCHHHHHHHHHHH
Confidence 11 1 3345567889999999999999999999999999999999999999999999999999887653322 2223
Q ss_pred HHHHHHHHHHHHhhccCCcCcCCCCCcchhhhhhhhhhhhhHHhhccccCCCcHHHhhhcHHHHHHHHHHHHHHHHHHHH
Q 014481 276 GLLGIAWFSGFKILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTC 355 (423)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 355 (423)
+++.++..++..+-.|++........++++. .. ...|+++..+|....+....++...+++.-
T Consensus 165 a~i~~~l~~ia~wg~E~r~~~~~~~~~~~~~-~f----------------~~a~~~~~~~~~a~~f~~fl~l~t~a~~~Q 227 (403)
T PF03209_consen 165 ALIALLLNLIALWGQEPRRSRRAAAAERPRP-PF----------------REAWRQVWASPQARRFFVFLFLGTLAFFMQ 227 (403)
T ss_pred HHHHHHHHHHHHHhcccCCcccccCCCCCCc-cH----------------HHHHHHHHhCCChhHHHHHHHHHHHHHHhh
Confidence 3333332222333333332222211111100 00 012567788888888888888888888888
Q ss_pred HhhhhHHHHHhhCCChhhHHHHHHHHHHHHHHHHHHHHHHhHH
Q 014481 356 LSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADN 398 (423)
Q Consensus 356 ~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr 398 (423)
...+-+|--+.+|++..+...+....+.+..+|..+.|++..|
T Consensus 228 D~iLEPygg~Vfgmsv~eTT~Lta~~~~G~L~G~~~~g~~l~~ 270 (403)
T PF03209_consen 228 DVILEPYGGEVFGMSVGETTRLTAFWGGGTLLGMLLAGFLLSR 270 (403)
T ss_pred HHHcCCchhHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 8899999999999999999999999999999999999988774
No 152
>PRK09952 shikimate transporter; Provisional
Probab=99.47 E-value=1.9e-12 Score=124.67 Aligned_cols=163 Identities=15% Similarity=0.122 Sum_probs=117.8
Q ss_pred hhhhhhhhHHH-hhhhhCCCcchhhHHHHHHHHHHHhhhhhhhhHhhHhcCchHHHHHHHHHHHHHHHHHH-h--hhHHH
Q 014481 129 DKVNLSVAIIP-MSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPL-L--AGFMP 204 (423)
Q Consensus 129 ~~~~~~~~~~~-~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~-~--~~~~~ 204 (423)
..+......|. +.+++|.+......+..+..+...++.++.|+++||+|||++++++.++..++.+.+.. . .+..+
T Consensus 265 ~~~~~~~~~~~y~~~~~g~s~~~~~~~~~~~g~~~~i~~~~~g~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (438)
T PRK09952 265 TMYIVTAFALNYSTQNLGLPRELFLNIGLLVGGLSCLTIPCFAWLADRFGRRRVYITGALIGTLSAFPFFMALEAQSIFW 344 (438)
T ss_pred HHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHcCChHH
Confidence 33344444554 45678888876666666677777888999999999999999998887665544332211 1 12334
Q ss_pred HHHHHHHHHHhhcccchHhHHHHHHhcCCCCchhhHHHHHH-hhhhhHHHHHHhhHHHhhhcc--CchHHHHHHHHHHHH
Q 014481 205 GLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVF-GGLSFGSVAGLLLAPPIIENL--GWESVFYIFGLLGIA 281 (423)
Q Consensus 205 ~~~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~-~~~~~g~~~g~~~~~~l~~~~--gw~~~~~~~~~~~~~ 281 (423)
.+++..++.+++.+...+...+++.|.+|.+.|+.+.++.+ .+..+|+.++|.+.+++.+.. +|...+.+.++..++
T Consensus 345 ~~~~~~~l~~~~~~~~~~~~~~~~~e~~p~~~r~tg~g~~~~~~~~lgg~~~p~i~g~l~~~~~~~~~~~~~~~~~~~~i 424 (438)
T PRK09952 345 IVFFSIMLANIAHDMVVCVQQPMFTEMFGASYRYSGAGVGYQVASVVGGGFTPFIAAALVTYFGGSWHSVAIYLLAGCLI 424 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHCCcchhHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHH
Confidence 44555667778877778888999999999999999999854 445589999999999998743 488888887777777
Q ss_pred HHHHHHhhcc
Q 014481 282 WFSGFKILQE 291 (423)
Q Consensus 282 ~~~~~~~~~~ 291 (423)
.++..+.+++
T Consensus 425 ~~v~~~~~~~ 434 (438)
T PRK09952 425 SAMTALLMKD 434 (438)
T ss_pred HHHHHHHccc
Confidence 7666666654
No 153
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=99.45 E-value=7.1e-12 Score=120.22 Aligned_cols=181 Identities=17% Similarity=0.125 Sum_probs=146.3
Q ss_pred HHHHHHHHHHHHHHHhhhhhhhhh-HHHhhhhhCCCcchhhHHHHHHHHHHHhhhhhhhhHhhHhcCc--hHHHHHHHHH
Q 014481 113 YKLIGTTSLAFVICNMDKVNLSVA-IIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGR--KVLQTGVLIW 189 (423)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r--~~~~~~~~~~ 189 (423)
.+.+....+++++..-+.+.+... .....+++|++..+...+..+..+..++|++++|++.||+|.| ++++++.+++
T Consensus 280 ~~~~~~fLia~~l~~dg~~ti~~~~~i~a~~~lg~s~~~l~~~~l~~~i~a~~Ga~~~g~l~~r~g~k~~~~l~~~l~~~ 359 (477)
T PF11700_consen 280 LRQLFLFLIAYFLYSDGVNTIISFAGIYATEVLGMSTTQLIVFGLVVQIVAIIGALLFGWLQDRFGPKTKRTLLISLILW 359 (477)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHH
Confidence 344555555655544444444433 4445668999999999999999999999999999999999999 8888887777
Q ss_pred HHHHHHHHHh--------hhHHHHHHHHHHHHHhhcccchHhHHHHHHhcCCCCchhhHHHHHHhhhhhHHHHHHhhHHH
Q 014481 190 SLATALLPLL--------AGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPP 261 (423)
Q Consensus 190 ~~~~~~~~~~--------~~~~~~~~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~ 261 (423)
.+..+.. .+ .++.+.+++..++.|+..|..++..-++.+++.|+++.+..+|++....-..+.+||++.+.
T Consensus 360 ~~i~~~g-~~G~~~~~~g~~~~~~f~~~a~~~G~~~G~~qs~sRs~~~~LiP~g~e~efFgly~i~gk~ss~lGPll~g~ 438 (477)
T PF11700_consen 360 IIIPLYG-LFGFWPSFFGLKSPWEFWVLAVLIGLFMGGIQSASRSLFSRLIPPGREAEFFGLYAITGKASSWLGPLLFGL 438 (477)
T ss_pred HHHHHHH-HHHhhhcccCcccHHHHHHHHHHHHHHhhhHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5544333 23 34557888999999999999999999999999999999999999999999999999999999
Q ss_pred hhhccC-chHHHHHHHHHHHHHHHHHHhhccCCc
Q 014481 262 IIENLG-WESVFYIFGLLGIAWFSGFKILQEGET 294 (423)
Q Consensus 262 l~~~~g-w~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (423)
+.+..| .|+.+....++.++.+++.+.++.++.
T Consensus 439 i~~~tg~~r~g~~~l~~lf~~gl~ll~~v~~~~g 472 (477)
T PF11700_consen 439 ITDATGSQRYGFLFLLVLFLIGLILLFFVDVEKG 472 (477)
T ss_pred HHHHhCCchhHHHHHHHHHHHHHHHHhhccchhh
Confidence 998876 888888888888777777777665443
No 154
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.41 E-value=1.2e-11 Score=116.94 Aligned_cols=150 Identities=17% Similarity=0.099 Sum_probs=122.1
Q ss_pred hhhhhhHHHhhhhhCCCcchhhHHHHHHHHHHHhhhhhhhhHhhHhcCchHHHHHHHHHHHHHHHHHHhhhHHHHHHHHH
Q 014481 131 VNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPLLAGFMPGLVLSR 210 (423)
Q Consensus 131 ~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 210 (423)
.......|.+.++.|.+..+.|.+.+...++..+..++.|++.||+|+|+.+.++.++.++..++. ...++.+.+++..
T Consensus 222 ~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~l~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 300 (382)
T PRK11128 222 AAYYGFSAIYWQAAGYSASTIGYLWSLGVVAEVLIFAFSNRLFRRWSARDLLLLSAICGVVRWGLM-GSTTALPWLIVIQ 300 (382)
T ss_pred HhHHHHHHHHHHHCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH-HhhhhHHHHHHHH
Confidence 334444555557799999999999999999999999999999999999999999988888876665 4566778888899
Q ss_pred HHHHhhcccchHhHHHHHHhcCCCCchhhHHHHHH-hhhhhHHHHHHhhHHHhhhccCchHHHHHHHHHHHHHH
Q 014481 211 VLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVF-GGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAWF 283 (423)
Q Consensus 211 ~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~-~~~~~g~~~g~~~~~~l~~~~gw~~~~~~~~~~~~~~~ 283 (423)
++.|++.+...+....++.+. +++++++..++++ ....+|..+||.++|.+.+..|+ ..|+..+++.++.+
T Consensus 301 ~l~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~ig~~i~G~l~~~~g~-~~~~~~~~~~~~~~ 372 (382)
T PRK11128 301 ILHCGTFTVCHLAAMRYIAAR-PGSEVIRLQALYSALAMGGSIAIMTVLSGFLYQHLGA-GVFWVMALVALPAL 372 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHC-CHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccH-HHHHHHHHHHHHHH
Confidence 999999988888888888886 5567788899876 55678889999999999999887 46666666655443
No 155
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=99.40 E-value=2.4e-11 Score=110.34 Aligned_cols=243 Identities=17% Similarity=0.103 Sum_probs=175.2
Q ss_pred cchhhHHHHHHHHHHHhhhhhhhhHhhHhcCchHHHHHHHHHHHHH-HHHHHhhh--HHHHHHHHHHHHHhhcccchHhH
Q 014481 148 SSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLAT-ALLPLLAG--FMPGLVLSRVLVGIGEGVSPSAA 224 (423)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~-~~~~~~~~--~~~~~~~~~~l~G~~~~~~~~~~ 224 (423)
.+..|...++..+..++.+|+.|.++|+.|+||..+-.+....+.. +++.+..+ +++..++..++..++........
T Consensus 57 ~a~~gy~~aia~llia~LapiLG~iaD~~g~Rk~~~~~f~~i~i~~~~~L~~i~~~s~~~~~l~~~il~~i~~~~s~Vfy 136 (438)
T COG2270 57 TAYWGYASAIAGLLIALLAPILGTIADYPGPRKKFFGFFTAIGIISTFLLWFIPPGSYLLLLLLFLILASIGFEFSNVFY 136 (438)
T ss_pred hhHHHHHHHHHHHHHHHHHHHhhhhhccCCCcchHHHHHHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHhcchhheeh
Confidence 3456888889999999999999999999999888776655555544 33334444 45566677788889888888999
Q ss_pred HHHHHhcCCCCchhhHHHHHHhhhhhHHHHHHhhH--HHhh----------------hccCchHHHHHHHHHHHHHHHHH
Q 014481 225 TDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLA--PPII----------------ENLGWESVFYIFGLLGIAWFSGF 286 (423)
Q Consensus 225 ~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~--~~l~----------------~~~gw~~~~~~~~~~~~~~~~~~ 286 (423)
.+++.+..++++-++..++-.....+|+.+.-++. ..+. +...-|.++.+.++..++..+-.
T Consensus 137 ds~L~~~~~k~~~~riS~lg~~~gylgs~i~li~~~~~~~~~~~~~~~~~l~~l~~~~~~~~ri~~~l~A~W~li~~iPm 216 (438)
T COG2270 137 DSMLPRLTTKDNMGRISGLGWALGYLGSVILLIFVVLGFALGQQTGITIILLGLPPADGEDVRITGLLAALWWLLFALPM 216 (438)
T ss_pred hhHhhhhcCccccCcccccccccccccchHHHHHHHHHHhcccccceeEEeeccCccccccchhHHHHHHHHHHHHHhHH
Confidence 99999999988888888876666677766654442 1111 22345777777777776665555
Q ss_pred HhhccCCcCcCCCCCcchhhhhhhhhhhhhHHhhccccCCCcHHHhhhcHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHh
Q 014481 287 KILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEE 366 (423)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 366 (423)
+...++.+..... ... .......+.. .+++++.+++.+..+.++.+++.=+..++...-..|....
T Consensus 217 ~~~v~~~~~~~~~-~~~----~l~~g~k~L~---------~t~k~i~~~~~i~~FLiA~~~~~DGv~til~~~~~fg~~~ 282 (438)
T COG2270 217 ILNVHDAEKISSP-PPT----ALRNGFKELK---------STFKEIRGRKNLVLFLIARFFYIDGVNTILAMGGVFGAAD 282 (438)
T ss_pred Hhccccccccccc-chH----HHHHHHHHHH---------HHHHHHhcccchHHHHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence 4443333321100 000 0000111111 1257788888899999999999989999999999999988
Q ss_pred hCCChhhHHHHHHHHHHHHHHHHHHHHHHhHHhhhcCC
Q 014481 367 LSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGV 404 (423)
Q Consensus 367 ~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~r~~ 404 (423)
+|++..+..++.....+.+++|.++.|++.||++.|+.
T Consensus 283 ~gls~~~lll~g~~~~vvA~lg~ii~g~Ld~rfg~k~v 320 (438)
T COG2270 283 LGLSSTELLLIGIALSVVAALGAIIAGFLDERFGSKPV 320 (438)
T ss_pred cCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcee
Confidence 99999999999999999999999999999999998843
No 156
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=99.40 E-value=1.2e-11 Score=121.32 Aligned_cols=173 Identities=12% Similarity=0.058 Sum_probs=113.7
Q ss_pred HHHHHHhhhhhhhhhHHHhhhhhCCCcchhhH------------HHHHHHHHHHhhhhhhhhHhhHhcCchHHHHHHHHH
Q 014481 122 AFVICNMDKVNLSVAIIPMSHRFGWNSSVAGL------------VQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIW 189 (423)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~------------~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~ 189 (423)
..+...+..+......|.+.++.|.+....+. ...+..++..++.++.++++||+|||+.++++.++.
T Consensus 296 ~~~~~~~~~y~~~~~~p~i~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~l~dr~gRR~~l~~~~~~~ 375 (502)
T TIGR00887 296 SWFLLDIAFYGVNLNQKVILSAIGYSPPAATNNAYEELYKTAVGNLIIALAGTVPGYWVTVFLVDIIGRKPIQLMGFFIL 375 (502)
T ss_pred HHHHHHHHHHccccccHHHHHHHcCCCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcchhHHHHHHHHH
Confidence 33333333334444577777788876543221 223344566678889999999999999998888777
Q ss_pred HHHHHHHHHhhh---HHHHHHHHHHHHHhhcccchHhHHHHHHhcCCCCchhhHHHHHHhhhhhHHHHHHhhHHHhhhc-
Q 014481 190 SLATALLPLLAG---FMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIEN- 265 (423)
Q Consensus 190 ~~~~~~~~~~~~---~~~~~~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~- 265 (423)
+++.++...... ....+...-+...++..+..+....+.+|.+|.+.|++++|+.+....+|.+++|.+.+.+.+.
T Consensus 376 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~p~~~R~~~~g~~~~~~~~~~~~~~~~~~~l~~~~ 455 (502)
T TIGR00887 376 TVLFFVLGFAYNHLSTHGFLAIYVLAQFFANFGPNATTFIVPGEVFPTRYRSTAHGISAASGKAGAIIGQFGFLYLAQHG 455 (502)
T ss_pred HHHHHHHHHHHHhcchhHHHHHHHHHHHHHhcCCCchhhhhhhccCchhHHHHHHHHHHHHhhhHHHHHHHHhhhhhccc
Confidence 766655433221 1111111111222222233456677789999999999999999999999999999999998874
Q ss_pred ---------cCchHHHHHHHHHHHHHHHHHHhhccCCc
Q 014481 266 ---------LGWESVFYIFGLLGIAWFSGFKILQEGET 294 (423)
Q Consensus 266 ---------~gw~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (423)
.++...|++.+++.++..+..+++||++.
T Consensus 456 ~~~~~~~~~~~~~~~~~i~~~~~~~~~i~~~~lpEt~~ 493 (502)
T TIGR00887 456 DPTKGYPTGIWMGHVLEIFALFMFLGILFTLLIPETKG 493 (502)
T ss_pred cccccccccccchHHHHHHHHHHHHHHHHheEeccCCC
Confidence 34566788888777766555566676543
No 157
>PRK10504 putative transporter; Provisional
Probab=99.40 E-value=1.1e-11 Score=120.59 Aligned_cols=147 Identities=19% Similarity=0.167 Sum_probs=116.8
Q ss_pred HHHHHHhhhhhhhhhHHHhhh-hhCCCcchhhHHHHHHHHHHHhhhhhhhhHhhHhcCchHHHHHHHHHHHHHHHHHHhh
Q 014481 122 AFVICNMDKVNLSVAIIPMSH-RFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPLLA 200 (423)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~~~-~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~ 200 (423)
..++............|.+.+ .+|.++.+.++......++..++.++.|++.||+|+|+++..+.++.++...++....
T Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~ 348 (471)
T PRK10504 269 GSFAGRIGSGMLPFMTPVFLQIGLGFSPFHAGLMMIPMVLGSMGMKRIVVQVVNRFGYRRVLVATTLGLALVSLLFMLVA 348 (471)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHhcc
Confidence 333334444455556676555 5899999999999999999999999999999999999999988887777765553332
Q ss_pred --hHHHHHHHHHHHHHhhcccchHhHHHHHHhcCCCCchhhHHHHHHhhhhhHHHHHHhhHHHhhhccCc
Q 014481 201 --GFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGW 268 (423)
Q Consensus 201 --~~~~~~~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw 268 (423)
++.+.+.+..++.|++.+...+....++.+..|+++++.++++.+....+|..+|+.+++.+.+..|+
T Consensus 349 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~i~g~ll~~~g~ 418 (471)
T PRK10504 349 LLGWYYLLPFVLFLQGMVNSTRFSSMNTLTLKDLPDNLASSGNSLLSMIMQLSMSIGVTIAGLLLGLFGQ 418 (471)
T ss_pred ccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 33333445667788888888888889999999999999999999999999999999999998876654
No 158
>PRK12307 putative sialic acid transporter; Provisional
Probab=99.39 E-value=2e-11 Score=117.34 Aligned_cols=143 Identities=13% Similarity=0.072 Sum_probs=106.6
Q ss_pred hhhhHHHhhhhhCCCcchhhHHHHHHHHHHHhhhhhhhhHhhHhcCchHHHHHHHHHHHHHHHHHHhhh-HHHHHHHHHH
Q 014481 133 LSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPLLAG-FMPGLVLSRV 211 (423)
Q Consensus 133 ~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 211 (423)
....+|.+.++.|.+..+.+.+.+...++..++.++.|++.||+|||+.+..+.++.++..+....... ....+.++.+
T Consensus 250 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 329 (426)
T PRK12307 250 IFGLLPTYLAGEGFDTGVVSNLMTAAAFGTVLGNIVWGLCADRIGLKKTFSIGLLMSFLFIFPLFRIPQDNYLLLGACLF 329 (426)
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHH
Confidence 445567766778999999999999999999999999999999999999998887776655544322222 2222222222
Q ss_pred HHHhhcccchHhHHHHHHhcCCCCchhhHHHHHHhhhhhHHHHHHhhHHHhhhccCchHHHHHH
Q 014481 212 LVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIF 275 (423)
Q Consensus 212 l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~~~~~ 275 (423)
..+++..+..+....++.|.+|+++|++++|+......+|..++|.+.+++.+..|+....++.
T Consensus 330 ~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~~~~~gp~~~g~l~~~~g~~~~~~~~ 393 (426)
T PRK12307 330 GLMATNVGVGGLVPKFLYDYFPLEVRGLGTGLIYNLAATSGTFNSMAATWLGITMGLGAALTFI 393 (426)
T ss_pred HHHHhcccHhHHHHHHHHHhCcHHHHhhhhhHHHHHHhHHHHHHHHHHHHHHHcccHHHHHHHH
Confidence 2223333334556678899999999999999999999999999999999999988866544433
No 159
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=99.39 E-value=1.3e-11 Score=120.39 Aligned_cols=161 Identities=11% Similarity=-0.015 Sum_probs=118.7
Q ss_pred hhhhhhhhHHHhhhhhCCCcchhhHHHHHHHHHHHhhhhhhhhHhhHhcCchHHHHHHHHHHHHHHHHHHhhh-H-H-HH
Q 014481 129 DKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPLLAG-F-M-PG 205 (423)
Q Consensus 129 ~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~~-~-~-~~ 205 (423)
+........|.+.+++|.+....++......+...++.++.|+++||+|||+.++.+.++.+++.+++..... + . ..
T Consensus 286 ~~~~~~~~~p~i~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~r~~~i~~~~~~~v~~~~l~~~~~~~~~~~~ 365 (479)
T PRK10077 286 GINVVLYYAPEIFKTLGASTDIALLQTIIVGVINLTFTVLAIMTVDKFGRKPLQIIGALGMAIGMFSLGTAFYTQAPGIV 365 (479)
T ss_pred ChhHHHHHHHHHHHHcCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhcChHHHHHhHHHHHHHHHHHHHHHhcCcccHH
Confidence 3344455668888889988877778878888899999999999999999999999999888887766532211 1 1 12
Q ss_pred HHHHHHHHHhhccc-chHhHHHHHHhcCCCCchhhHHHHHHhhhhhHHHHHHhhHHHh------hhccCchHHHHHHHHH
Q 014481 206 LVLSRVLVGIGEGV-SPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPI------IENLGWESVFYIFGLL 278 (423)
Q Consensus 206 ~~~~~~l~G~~~~~-~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l------~~~~gw~~~~~~~~~~ 278 (423)
...+.++.+++.+. ..+....++.|.+|+++|++++|+......+|..+++.+.+.+ .+..+|++.|++.+++
T Consensus 366 ~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~ 445 (479)
T PRK10077 366 ALLSMLFYVAAFAMSWGPVCWVLLSEIFPNAIRGKALAIAVAAQWIANYFVSWTFPMMDKNSWLVAHFHNGFSYWIYGCM 445 (479)
T ss_pred HHHHHHHHHHHHhccccchhHHHhHhhCChhHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccchhhhccCccHHHHHHHH
Confidence 22333444444333 3366789999999999999999999999999998886665544 4567899999998887
Q ss_pred HHHHHHHHHhh
Q 014481 279 GIAWFSGFKIL 289 (423)
Q Consensus 279 ~~~~~~~~~~~ 289 (423)
.++.++..+++
T Consensus 446 ~~~~~~~~~~~ 456 (479)
T PRK10077 446 GVLAALFMWKF 456 (479)
T ss_pred HHHHHHHHHhc
Confidence 76665554443
No 160
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.39 E-value=3e-12 Score=120.11 Aligned_cols=133 Identities=23% Similarity=0.328 Sum_probs=115.0
Q ss_pred hhHHHhhhh-hCCCcchhhHHHHHHHHHHHhhhhhhhhHhhHhcCchHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHH
Q 014481 135 VAIIPMSHR-FGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPLLAGFMPGLVLSRVLV 213 (423)
Q Consensus 135 ~~~~~~~~~-~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 213 (423)
...|.+.++ +|.+..+.+++.+...++..++.++.+++.||+|||+.+..+.++.++..++.....++.+.++++.++.
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (365)
T TIGR00900 232 ALFPYVQSKYLGRGSTHYGWVLAAFGLGALLGALLLGLLGRYFKRMALMTGAIFVIGLAILVVGLTPPNFPLFLVLWFAI 311 (365)
T ss_pred HHhHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHH
Confidence 556666554 8999999999999999999999999999999999999998887777776655533332367788889999
Q ss_pred HhhcccchHhHHHHHHhcCCCCchhhHHHHHHhhhhhHHHHHHhhHHHhhhccC
Q 014481 214 GIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLG 267 (423)
Q Consensus 214 G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g 267 (423)
|++.+...+...+++.|.+|+++|++++|+.+....+|..++|.++|.+.+..|
T Consensus 312 g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~g~~~~g~l~~~~g 365 (365)
T TIGR00900 312 GVGYGPINVPQGTLLQRRVPAELLGRVFGAQFSLSHAAWPLGLILAGPLADHLG 365 (365)
T ss_pred HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 999999999999999999999999999999999999999999999999988654
No 161
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=99.39 E-value=6.6e-12 Score=118.38 Aligned_cols=154 Identities=15% Similarity=0.128 Sum_probs=108.9
Q ss_pred HHHHHHHHHhhhhhhhhhHHH-hhhhhCCCcchhhHHHHHHHHHHHhhhhhhhhHhhHhcCc-hHHH-HHHHHHHHHHHH
Q 014481 119 TSLAFVICNMDKVNLSVAIIP-MSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGR-KVLQ-TGVLIWSLATAL 195 (423)
Q Consensus 119 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r-~~~~-~~~~~~~~~~~~ 195 (423)
+.+..+.............|. +.+.+|.+..+.++..+...++..++.++.|++.||.++| +... .......+..+.
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~ 300 (379)
T TIGR00881 221 ISLGYVFVYVVRTGILDWSPLYLTQEKGFSKEKASWAFTLYELGGLVGTLLAGWLSDKLFNGRRGPLAVFFMALIIVSLL 300 (379)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHcchhHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHH
Confidence 334444444444445555555 4567899999999999999999999999999999986433 3222 211111111111
Q ss_pred HHHh--hhHHHHHHHHHHHHHhhcccchHhHHHHHHhcCCCCchhhHHHHHHhhhhhHHHHHHhhHHHhhhccCchHHH
Q 014481 196 LPLL--AGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVF 272 (423)
Q Consensus 196 ~~~~--~~~~~~~~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~~ 272 (423)
.... ..+.+..+++.++.|+......+....++.|.+|+++|+++.|+++....+|..++|.+.|.+.+..||++.|
T Consensus 301 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~f 379 (379)
T TIGR00881 301 VYWLNPAANPLMDLICLFALGFLVYGPQMLIGVIASELAPKKAAGTAAGFVGFFAYLGGILAGLPLGYLADGFGWAGAF 379 (379)
T ss_pred HHhcCcchhHHHHHHHHHHHHHHHhhhhHHHHHHHHHhcCcchhHHHHHHHHHhhhhhhhhhhhhHHHHHHhhcccccC
Confidence 1111 2334455566677777666666666788999999999999999999999999999999999999999998754
No 162
>PRK15075 citrate-proton symporter; Provisional
Probab=99.38 E-value=9.9e-12 Score=119.62 Aligned_cols=145 Identities=14% Similarity=0.076 Sum_probs=103.4
Q ss_pred HHHhhhhhhhhhHHHhhh-hhCCCcchhhHHHHHHHHHHHhhhhhhhhHhhHhcCchHHHHHHHHHHHHHHH-HHH--hh
Q 014481 125 ICNMDKVNLSVAIIPMSH-RFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATAL-LPL--LA 200 (423)
Q Consensus 125 ~~~~~~~~~~~~~~~~~~-~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~-~~~--~~ 200 (423)
.............|.+.+ .+|.+..+.++....+.++..++.+++|+++||+|||++++++.++..+.... ... ..
T Consensus 249 ~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~ 328 (434)
T PRK15075 249 MTTVSFYLITVYTPTFGKTVLHLSAADSLLVTLCVGVSNFIWLPIGGALSDRIGRRPVLIAFTVLAILTAYPALSWLVAA 328 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 334444555666777554 48999999999998999999999999999999999999988765543322211 111 12
Q ss_pred hHHHHHHHHHHHHHhhcccchHhHHHHHHhcCCCCchhhHHHHHHh-hhhhHHHHHHhhHHHhhhccCch
Q 014481 201 GFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFG-GLSFGSVAGLLLAPPIIENLGWE 269 (423)
Q Consensus 201 ~~~~~~~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~-~~~~g~~~g~~~~~~l~~~~gw~ 269 (423)
++...+.+..++.|++.+...+....++.|.+|++.|++++++... +..+++.++|.+.+++.+..|++
T Consensus 329 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~e~~p~~~rg~~~g~~~~~~~~~~g~~~p~~~g~i~~~~g~~ 398 (434)
T PRK15075 329 PSFARMLAVELWLSFLYGSYNGAMVVALTEVMPAEVRTAGFSLAYSLATAIFGGFTPAISTWLIHVTGDK 398 (434)
T ss_pred CchHHHHHHHHHHHHHHHHHHhhHHHHHHHHCCCCccchheeHHHHHHHHHHhhhHHHHHHHHHHhcCCc
Confidence 2323333444555666666666667889999999999999998644 44456788999999999988864
No 163
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=99.38 E-value=1.4e-11 Score=119.40 Aligned_cols=158 Identities=20% Similarity=0.135 Sum_probs=135.7
Q ss_pred hhhhhhHHHhh-hhhCCCcchhhHHHHHHHHHHHhhhhhhhhHhhHhcCchHHHHHHHHHHHHHHHHHHhhhHHHHHHHH
Q 014481 131 VNLSVAIIPMS-HRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPLLAGFMPGLVLS 209 (423)
Q Consensus 131 ~~~~~~~~~~~-~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 209 (423)
..+...+|.+. +++|.++...|++.+++.+|..+++++.+++.+|+++++.+..+.++++++.+.+ .+.++.+..+++
T Consensus 235 ~a~~aLlPl~a~~~l~~~a~~yGll~a~~gvGai~Gal~~~~l~~~~~~~~lv~~~~~~~a~~~~~l-al~~~~~~~~~~ 313 (524)
T PF05977_consen 235 SAVWALLPLFARDVLGGGASGYGLLLAAFGVGAILGALLLPRLRRRLSSRRLVLLASLLFALALLLL-ALSPSFWLALIA 313 (524)
T ss_pred hHHHHhhhHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhcccCcchhhHHHHHHHHHHHHHH-hcchHHHHHHHH
Confidence 33445567654 5689999999999999999999999999999999999999999988888887776 566777888888
Q ss_pred HHHHHhhcccchHhHHHHHHhcCCCCchhhHHHHHHhhhhhHHHHHHhhHHHhhhccCchHHHHHHHHHHHHHHHHHHhh
Q 014481 210 RVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAWFSGFKIL 289 (423)
Q Consensus 210 ~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~~~~~~~~~~~~~~~~~~~ 289 (423)
.++.|++.........+.+....|++.||++++++.+....+..+|.++.|.+.+..|.+.++.+.++..++..++....
T Consensus 314 l~l~G~~~~~~~~~~~t~~Q~~~P~~~~GRv~si~~~~~~g~~~lGsll~G~la~~~g~~~al~~a~~~lll~~~~~~~~ 393 (524)
T PF05977_consen 314 LFLAGAAWIIANSSLNTLVQLSVPDWVRGRVFSIYQMVFFGGMPLGSLLWGFLADHFGVRTALLIAGAALLLSALIALRF 393 (524)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHh
Confidence 89999999888888899999999999999999999999999999999999999999999999888777665554444433
No 164
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.38 E-value=1.3e-11 Score=117.45 Aligned_cols=141 Identities=12% Similarity=0.058 Sum_probs=117.0
Q ss_pred CCCcchhhHHHHHHHHHHHhhhhhhhhHhhHhcCchHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhhcccchHhH
Q 014481 145 GWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPLLAGFMPGLVLSRVLVGIGEGVSPSAA 224 (423)
Q Consensus 145 ~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~ 224 (423)
+.+....|.+.++..+...++.++.|++.||+|+|+.+.++.++.++...+.. ..++.+.++++.++.|++.+......
T Consensus 250 ~~~~~~~g~~~~~~~i~~~~~~~~~g~l~~r~g~~~~l~~~~~l~~l~~~~~~-~~~~~~~~~~~~~l~g~~~~~~~~~~ 328 (396)
T TIGR00882 250 QQGTRVFGYVTTMGELLNALIMFCAPLIINRIGAKNALLIAGTIMSVRIIGSS-FATTALEVVILKMLHAFEVPFLLVGC 328 (396)
T ss_pred ccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHH-hcCChHHHHHHHHHHHHHHHHHHHHH
Confidence 45566778889998899999999999999999999999999888888776653 45666777888999999877666666
Q ss_pred HHHHHhcCCCCchhhHHHH-HHhhhhhHHHHHHhhHHHhhhccCchHHHHHHHHHHHHHHHHH
Q 014481 225 TDLIARSIPLEERSRAVSF-VFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAWFSGF 286 (423)
Q Consensus 225 ~~~i~~~~~~~~r~~~~~~-~~~~~~~g~~~g~~~~~~l~~~~gw~~~~~~~~~~~~~~~~~~ 286 (423)
..++.+..+++.+++..+. ++....+|..+++.++|++.+..||+.+|.+.+++.++..+..
T Consensus 329 ~~~~~~~~~~~~~at~~~~~~~~~~~lg~~~~~~l~G~l~~~~G~~~~f~~~~~~~~i~~~~~ 391 (396)
T TIGR00882 329 FKYITSQFDVRLSATIYLIGFQFAKQLAMIFLSTLAGNMYDSIGFQGAYLVLGCIVLLFTLIS 391 (396)
T ss_pred HHHHHHhCCcceEEEeehHHHHHHHHHHHHHHHHhHHHHHHhcccHHHHHHHHHHHHHHHHHH
Confidence 6777888887888887766 6788999999999999999999999999999888877665443
No 165
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=99.37 E-value=5.4e-11 Score=112.96 Aligned_cols=279 Identities=18% Similarity=0.141 Sum_probs=182.9
Q ss_pred HHHHHHHHHHHHHHHhhhhhhhhhHHHhhhhhCCCcc-hhhHHHHHH----HHHHHhhhhhhhhHhhHhcCchHHHHHHH
Q 014481 113 YKLIGTTSLAFVICNMDKVNLSVAIIPMSHRFGWNSS-VAGLVQSSF----FWGYALSQLPGGWLAKIFGGRKVLQTGVL 187 (423)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~-~~~~~~~~~----~~~~~~~~~~~g~l~dr~G~r~~~~~~~~ 187 (423)
+......++-.+...+......+..+.....++.+.. ..+...... .+...+.++..|.++||+|||..+.+..+
T Consensus 21 ~~~~~~~fl~~fa~~l~~~~~~~~~~~~~ct~~~~~~~~~~~~~~~~~~~~~~~~~i~s~~iG~lSD~~grk~~L~~~~~ 100 (463)
T KOG2816|consen 21 RHLEPLLFLYMFSWGLSSTVMTNVILYLACTFGDDYQLENGLLLGVKQVTAGLLTLISSPLIGALSDRYGRKVVLLLPLF 100 (463)
T ss_pred hHHHHHHHHHHHHHHhcCcchhhhhhhhhcccccCccchhhhhhhHHHHhhHHHHHHHHhhhHHhhhhhhhhhhHHHHHH
Confidence 4555556666666666666666666666555543322 223333333 67888999999999999999999999988
Q ss_pred HHHHHHHHHHHhhhHHHHHHHHHHHHHhhc--ccchHhHHHHHHhcCCCCchhhHHHHHHhhhhhHHHHHHhhHHHhhhc
Q 014481 188 IWSLATALLPLLAGFMPGLVLSRVLVGIGE--GVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIEN 265 (423)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~--~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~ 265 (423)
...+..++. .+.. +|.++ +.|+.. +.......++++|....++|...+|+.+.....+..++|.+++.+.+.
T Consensus 101 ~~~l~~~~~-~~~~-~~~~~----~~~l~g~~~~~~s~~~a~vadis~~~~R~~~~gll~~~~~~~~~~~p~~~~~~~~~ 174 (463)
T KOG2816|consen 101 GTILPALCL-LFQG-YWFFL----LLGLSGGFSAIFSVGFAYVADISSEEERSSSIGLLSGTFGAGLVIGPALGGYLVKF 174 (463)
T ss_pred HHHHhHHHH-HHHH-HHHhh----hcccccchhhhhhhhhhheeeccchhHHHHHHHHHHHHHHHHHhHHHHHHHHHHHh
Confidence 877777655 3433 34333 444433 355677889999999999999999999999999999999999999999
Q ss_pred cCchHHHHHHHHHHHHHHHH-HHhhccCCcCcCCCCCcchhhhhhhhhhhhhHHhhccccCCCcHHHhhhcHHHHHHHHH
Q 014481 266 LGWESVFYIFGLLGIAWFSG-FKILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYA 344 (423)
Q Consensus 266 ~gw~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 344 (423)
.|.-.+|.+..+..++..+. .+++||+..++..+...... ....+.......+. . ......-.+|..+.+++.
T Consensus 175 ~~~a~~f~ia~~~~~~~~~y~~~~l~Esl~~~~~~~~~~~~-~~~~~~~~~~~~~~---~--~~~~~~~~~r~~l~l~l~ 248 (463)
T KOG2816|consen 175 LGIALVFLIAAASGILSLLYMLLFLPESLQEKERSDATLRE-LTPGSLDSSHVADA---F--QSLTKVGPDRLLLLLLLV 248 (463)
T ss_pred cCchHHHHHHHHHHHHHHHHHhhccccccCccccccccccc-cCCCcccchhhhhh---h--hhhcccCCCccchHHHHH
Confidence 99999999988888776544 45556655443332100000 00000000000000 0 001112234555555555
Q ss_pred HHHHHHHHHHHHh-hhhHHHHHhhCCChhhHHHHHHHHHHHHHHHHHHHH-HHhHHhhhcC
Q 014481 345 HFCGSWGHYTCLS-WLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAA-QFADNLIATG 403 (423)
Q Consensus 345 ~~~~~~~~~~~~~-~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g-~l~dr~~~r~ 403 (423)
.++......+-.. .++.|+...+|+++.+.+.+.+.......++.++.. .+...++.|+
T Consensus 249 ~~~~~~~~~~~~~~~~~~yl~~~f~w~~~~~s~~~~~~~~~~~i~~l~~~~~l~~~l~~~~ 309 (463)
T KOG2816|consen 249 AFLSSLPEAGGASDVLLLYLKAKFGWNKKEFSDLLSLVSILGIISQLLLLPLLSSILGEKR 309 (463)
T ss_pred HHHHHHHHhcCceeEEEEEEeeecCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh
Confidence 5555444443333 557788888999999999998888888888888776 7777787774
No 166
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=99.37 E-value=1.1e-11 Score=119.34 Aligned_cols=163 Identities=13% Similarity=0.019 Sum_probs=108.8
Q ss_pred hhhhhhhhHHHhh-hhhCCCcchhhHHHHHHHHHHHhhhhhhhhHhhHhcCchHHHHHHHHHHH---HHHHHHHh-hhHH
Q 014481 129 DKVNLSVAIIPMS-HRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSL---ATALLPLL-AGFM 203 (423)
Q Consensus 129 ~~~~~~~~~~~~~-~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~---~~~~~~~~-~~~~ 203 (423)
.........|.+. +..|.+..+.++...++.++..++.++.|+++||+++++....+..+..+ +.+.+... ..+.
T Consensus 266 ~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 345 (438)
T TIGR00712 266 LRYGVLDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFKGNRGATGVFFMTLVTIAVIVYWMNPAGNP 345 (438)
T ss_pred HHHHHHHhHHHHHHHccCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhccCcccHHHHHHHHHHHHHHHHHHhcCCCch
Confidence 3344445666654 45799999999999999999999999999999999754433333222211 11111111 1222
Q ss_pred HHHHHHHHHHHhhcccchHhHHHHHHhcCCCCchhhHHHHHHhhhhhH-HHHHHhhHHHhhhccCchHHHHHHHHHHHHH
Q 014481 204 PGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFG-SVAGLLLAPPIIENLGWESVFYIFGLLGIAW 282 (423)
Q Consensus 204 ~~~~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g-~~~g~~~~~~l~~~~gw~~~~~~~~~~~~~~ 282 (423)
+...+..++.|++.............+.+|+++|++++|+.+....+| ..+||.+.|.+.+..||.+.|++.+...++.
T Consensus 346 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~gg~~~gp~l~G~l~~~~g~~~~~~~~~~~~~~~ 425 (438)
T TIGR00712 346 LVDMICMIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFGWDGGFMVMIGGSILA 425 (438)
T ss_pred HHHHHHHHHHHHHHccHHHHHHHHHHHhcChhheeeehhhhchHHHhhhhhhcchhHHHHHHhccchHHHHHHHHHHHHH
Confidence 333344455555433322333456778999999999999998887776 5789999999999999999998887776665
Q ss_pred HHHHH-hhcc
Q 014481 283 FSGFK-ILQE 291 (423)
Q Consensus 283 ~~~~~-~~~~ 291 (423)
.+..+ .++|
T Consensus 426 ~~~~~~~~~~ 435 (438)
T TIGR00712 426 VILLIVVMIG 435 (438)
T ss_pred HHHHHHHHhh
Confidence 44444 4444
No 167
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=99.35 E-value=4.8e-11 Score=114.81 Aligned_cols=162 Identities=15% Similarity=0.079 Sum_probs=103.8
Q ss_pred hhhhhhhhhHHHh-hhhhCCCcchhhHHHHHHHHHHHhhhhhhhhHhhHhcCchHHHHHHHHHHHHHHHHHH-h--hhHH
Q 014481 128 MDKVNLSVAIIPM-SHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPL-L--AGFM 203 (423)
Q Consensus 128 ~~~~~~~~~~~~~-~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~-~--~~~~ 203 (423)
...+.....+|.+ .+++|.+..+.++..++..++..++.++.|+++||+|||+.++++.++.++....... . .++.
T Consensus 257 ~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~i~~~~~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~ 336 (432)
T PRK10406 257 LCFYTFTTYMQKYLVNTAGMHANVASGIMTAALFVFMLIQPLIGALSDKIGRRTSMLCFGSLAALFTVPILSALQNVSSP 336 (432)
T ss_pred HHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHcCCcH
Confidence 3344455566664 4668999889999888888888899999999999999999887766554333321111 1 1222
Q ss_pred HHHHHHHHHHHhhcccchHhHHHHHHhcCCCCchhhHHHHHHhhhhh-HHHHHHhhHHHhhhccC-chHHHHHHHHHHHH
Q 014481 204 PGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSF-GSVAGLLLAPPIIENLG-WESVFYIFGLLGIA 281 (423)
Q Consensus 204 ~~~~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~-g~~~g~~~~~~l~~~~g-w~~~~~~~~~~~~~ 281 (423)
...+..-.+.+++.+...+....+++|++|++.|++++|+.+...++ ++...|.+.+.+ +..| |...+++.++..++
T Consensus 337 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~fp~~~r~t~~g~~~~~g~~~~g~~~p~~~~~l-~~~g~~~~~~~~~~~~~~i 415 (432)
T PRK10406 337 YAAFGLVMCALLIVSFYTSISGILKAEMFPAQVRALGVGLSYAVANALFGGSAEYVALSL-KSIGMETAFFWYVTLMAVV 415 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCccchhhhHHHHHHHHHHHhHHHHHHHHH-HHhCCCcHHHHHHHHHHHH
Confidence 22222222222333333455677889999999999999998765553 344577777755 4445 55566666666666
Q ss_pred HHHHHHhhc
Q 014481 282 WFSGFKILQ 290 (423)
Q Consensus 282 ~~~~~~~~~ 290 (423)
.++..++++
T Consensus 416 ~~~~~~~l~ 424 (432)
T PRK10406 416 AFLVSLMLH 424 (432)
T ss_pred HHHHHHHhh
Confidence 555555543
No 168
>TIGR00895 2A0115 benzoate transport.
Probab=99.34 E-value=1.4e-11 Score=116.93 Aligned_cols=143 Identities=20% Similarity=0.191 Sum_probs=113.5
Q ss_pred HHHHHHHHHhhhhhhhhhHHHhhhhhCCCcchhhHHHHHHHHHHHhhhhhhhhHhhHhcCchHHHHHHHHHHHHHHHHHH
Q 014481 119 TSLAFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPL 198 (423)
Q Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~ 198 (423)
+.+..++............|.+.+++|.+..+.++..+...++..++.++.|++.||+|+|+.+... .+.++...+...
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~-~~~~~~~~~~~~ 333 (398)
T TIGR00895 255 LWLLYFMLLVGVYFLTNWLPKLMVELGFSLSLAATGGALFNFGGVIGSIIFGWLADRLGPRVTALLL-LLGAVFAVLVGS 333 (398)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHH-HHHHHHHHHHHH
Confidence 3333344444455556667788888999999999999999999999999999999999999544443 333443333323
Q ss_pred hhhHHHHHHHHHHHHHhhcccchHhHHHHHHhcCCCCchhhHHHHHHhhhhhHHHHHHhhHHHh
Q 014481 199 LAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPI 262 (423)
Q Consensus 199 ~~~~~~~~~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l 262 (423)
...+.+.++++.++.|++.+...+...+++.+.+|+++|++++|+......+|..+||.++|.+
T Consensus 334 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~G~l 397 (398)
T TIGR00895 334 TLFSPTLLLLLGAIAGFFVNGGQSGLYALMALFYPTAIRATGVGWAIGIGRLGAIIGPILAGYL 397 (398)
T ss_pred HhhCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHhHHhc
Confidence 2445566778888999999999999999999999999999999999999999999999999876
No 169
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=99.34 E-value=3.9e-11 Score=113.84 Aligned_cols=151 Identities=15% Similarity=0.046 Sum_probs=114.5
Q ss_pred hhHHHhhhhhCCCcchhhHHHHHHHH-HHHhhhhhhhhHhhHhcCchHHHHHHHHHHHHHHHHHHhh-----hHHHHHHH
Q 014481 135 VAIIPMSHRFGWNSSVAGLVQSSFFW-GYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPLLA-----GFMPGLVL 208 (423)
Q Consensus 135 ~~~~~~~~~~~~s~~~~~~~~~~~~~-~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~ 208 (423)
...+.+.+|.|.+++++|++.....+ ...++.++.|++.||+|+|+.+.++.++.++..+...... .+...++.
T Consensus 229 ~~~~~~l~~~G~s~~~ig~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (390)
T TIGR02718 229 GLSKLYLVDAGWPLEWIGRLGMAGGAVTVLLGCGGGAWLVRRAGLWRTFILGVGLAGSLALLWFAQAAFWLAPGIAVAWS 308 (390)
T ss_pred HHhhHHHHhcCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHcccCCcHHHHHH
Confidence 34556666789999999999888764 6667789999999999999999887766534333221111 12233344
Q ss_pred HHHHHHhhcccchHhHHHHHHhcCCC-CchhhHHHHHHhhhhhHHHHHHhhHHHhhhccCchHHHHHHHHHHHHHHHH
Q 014481 209 SRVLVGIGEGVSPSAATDLIARSIPL-EERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAWFSG 285 (423)
Q Consensus 209 ~~~l~G~~~~~~~~~~~~~i~~~~~~-~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~~~~~~~~~~~~~~~ 285 (423)
..++.+++.+...+...+.+.+..++ +++++.+++.+...++|..+||.++|.+.+..|++..|++.+++.++.++.
T Consensus 309 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lg~~~g~~~~G~l~~~~G~~~~f~~~~~~~l~a~~~ 386 (390)
T TIGR02718 309 CSAFGSLITGITSVAIYTAFMRFAGDGDQAGTDVTAVQSTRDLGELIASSIAGYLTDRFGYAGGFLSGTVLAVLAILL 386 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHH
Confidence 45566666777777778887777776 789999999999999999999999999999999999999887776665443
No 170
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=99.34 E-value=2.7e-11 Score=115.38 Aligned_cols=151 Identities=14% Similarity=0.149 Sum_probs=106.8
Q ss_pred HHhhhhhCCCcchhhHHHHHHH-HHHHhhhhhhhhHhhHhcCchHHHHHHHHHHHHHHHH---HHhhhHHHHHHHHHH--
Q 014481 138 IPMSHRFGWNSSVAGLVQSSFF-WGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALL---PLLAGFMPGLVLSRV-- 211 (423)
Q Consensus 138 ~~~~~~~~~s~~~~~~~~~~~~-~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~-- 211 (423)
+.+.+++|+++.+++++.+... ++..++.+++|++.||+|+|+.+.++.++..+..+.+ ....++.+.++++-+
T Consensus 234 ~~l~~~~G~~~~~~g~~~~~~~~~~~i~g~~~~g~l~~r~g~~~~l~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~ 313 (402)
T PRK11902 234 TFLIRGAGFSAGEVGIVNKTLGLAATIVGALAGGTLMVRLGLYRSLMLFGVLQAVSNLGYWVLAVTPKHLWTMALAIGIE 313 (402)
T ss_pred HHHHHhcCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHH
Confidence 4466778999999999986654 5688999999999999999998877766655544322 122234455554443
Q ss_pred --HHHhhcccchHhHHHHHHhcCCCCchhhHHHHHHhhhhhHHHHHHhhHHHhhhccCchHHHHHHHHHHHHHHHHHHhh
Q 014481 212 --LVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAWFSGFKIL 289 (423)
Q Consensus 212 --l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~~~~~~~~~~~~~~~~~~~ 289 (423)
..|++.+...+....++.+.+|. +..++++...++|..+++.++|.+.+..||+..|.+.++++++.++.....
T Consensus 314 ~~~~g~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~l~~~~~~~~~G~l~~~~G~~~~f~~~~~~~~~~~~~~~~~ 389 (402)
T PRK11902 314 NLCGGMGTAAFVALLMALCNRSFSA----TQYALLSALASVGRVYVGPTSGYLVEAYGWPGFYLMTVVIALPGLALLWLM 389 (402)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCCcH----HHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHH
Confidence 44455555556666666666554 445666666678888777899999999999999999988887776665555
Q ss_pred ccC
Q 014481 290 QEG 292 (423)
Q Consensus 290 ~~~ 292 (423)
+.+
T Consensus 390 ~~~ 392 (402)
T PRK11902 390 RGT 392 (402)
T ss_pred hhh
Confidence 443
No 171
>PRK10054 putative transporter; Provisional
Probab=99.34 E-value=3.2e-11 Score=114.50 Aligned_cols=143 Identities=16% Similarity=0.054 Sum_probs=116.0
Q ss_pred hhhCCCcchhhHHHHHHHHHHHhhhhhhhhHhhHhcCchHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhhcccch
Q 014481 142 HRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPLLAGFMPGLVLSRVLVGIGEGVSP 221 (423)
Q Consensus 142 ~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~ 221 (423)
++.+.+....+++.+.+.+......++.|++.||+++|+.+.++.++.+++........++.+.++++.++.|+|.+...
T Consensus 237 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 316 (395)
T PRK10054 237 ADSDFAEKVVAVVLPVNAAMVVSLQYSVGRRLNAANIRPLMTAGTLCFVIGLVGFIFSGNSLLLWGMSAAVFTVGEIIYA 316 (395)
T ss_pred cccchHHHHHHHHHHhhhhheeeehhHHHHHHccCCchhHHHHHHHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHH
Confidence 45566777788888888888888888999999999999999999888777776553334566667778889999988888
Q ss_pred HhHHHHHHhcCCCCchhhHHHHHHhhhhhHHHHHHhhHHHhhhccCchHHHHHHHHHHHHHHHH
Q 014481 222 SAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAWFSG 285 (423)
Q Consensus 222 ~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~~~~~~~~~~~~~~~ 285 (423)
|.....+.+..|++.|+++++..+ ...+|..+||.++|.+.++.|....|++.+....+..+.
T Consensus 317 p~~~~~~~~~~p~~~~~~~~~~~~-~~~~G~~~Gp~~~G~l~~~~g~~~~~~~~~~~~~~~~~~ 379 (395)
T PRK10054 317 PGEYMLIDHIAPPGMKASYFSAQS-LGWLGAAINPLVSGVILTTLPPWSLFVILALAIVAAWLL 379 (395)
T ss_pred hhHHHHHHHhCCcccceehHhHHH-HHHHHHHHHHHHHHHHHHHcChhhHHHHHHHHHHHHHHH
Confidence 888889999999999999998765 566899999999999999999888888876665544333
No 172
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=99.34 E-value=8.8e-11 Score=107.29 Aligned_cols=159 Identities=11% Similarity=0.062 Sum_probs=119.6
Q ss_pred HHHHHHHHHHHHhhhhhhhhhHHHhhh---hhCCCcchhhHHHHHHHHHHHhhhhhhhhHhhHhcCchHHHHHHHHHHHH
Q 014481 116 IGTTSLAFVICNMDKVNLSVAIIPMSH---RFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLA 192 (423)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~ 192 (423)
+....+..++............+.+.+ .+|+++.+.++..+.+..+..++.++.+++.||+|+|+.+.++.++..++
T Consensus 142 ~~l~~~~~f~yvg~e~~~~~w~~~yl~~~~~~g~s~~~a~~~~s~~~~~~~iGr~~~~~l~~r~g~~~~l~~~~~l~~~~ 221 (310)
T TIGR01272 142 LVLGALGIFVYVGAEVSAGSFLVNFLSDPHALGLPEDQAAHFTAYTWGGAMVGRFIGSAVMPMISQGRYLAFNAFLAVLL 221 (310)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHH
Confidence 333444555544445555555565543 36999999999999999999999999999999999999988887776666
Q ss_pred HHHHHHhhhHHHHHHHHHHHHHhhcccchHhHHHHHHhcCCCCchhhHHHHHHhhhhhHHHHHHhhHHHhhhccCchHHH
Q 014481 193 TALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVF 272 (423)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~~ 272 (423)
.++. ...+. .....+-++.|++.+..+|...+...+..|+ +.+++.++. ....+|+.++|++.|.+.|..|.+..|
T Consensus 222 ~~l~-~~~~~-~~~~~~~~l~g~~~s~i~P~~~s~a~~~~~~-~~~~asai~-~~~~~Gg~i~P~l~G~lad~~g~~~a~ 297 (310)
T TIGR01272 222 SIGA-ALTHG-YVAMWFVLALGLFNSIMFPTIFSLALNALGR-HTSQGSGIL-CLAIVGGAIVPLLQGSLADCLGIQLAF 297 (310)
T ss_pred HHHH-HHcCC-HHHHHHHHHHHHHHHHHHHHHHHHHHhhhhh-hhhhhHHHH-HHHHhcchHHHHHHHHHHHhccchHHH
Confidence 5444 23333 2223455688999999999999999998874 456667775 567799999999999999999999888
Q ss_pred HHHHHH
Q 014481 273 YIFGLL 278 (423)
Q Consensus 273 ~~~~~~ 278 (423)
++..+.
T Consensus 298 ~v~~~~ 303 (310)
T TIGR01272 298 ALPVPC 303 (310)
T ss_pred HHHHHH
Confidence 754444
No 173
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=99.33 E-value=2.3e-11 Score=117.23 Aligned_cols=145 Identities=15% Similarity=0.182 Sum_probs=111.8
Q ss_pred HHHHHhhhhhhhhhHHHhhhh-hCCCcchhhHHHHHHHHHHHhhhhhhhhHhhHhcCchHHHHHHHHHHHHHHHHHHhhh
Q 014481 123 FVICNMDKVNLSVAIIPMSHR-FGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPLLAG 201 (423)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~-~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~~ 201 (423)
.++............+.+.++ ++ +....+++.++..++..++.+++++++||+|+|+.+.++.++.+++.++.....+
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~ 309 (437)
T TIGR00792 231 YLFYNLAFNIKNGVQVYYFTYVLG-DPELFSYMGSIAIVAGLIGVLLFPRLVKKFGRKILFAGGILLMVLGYLIFFFAGS 309 (437)
T ss_pred HHHHHHHHHHHcchhheeEeeecC-ChHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcch
Confidence 333333333333334443333 34 5566788888889999999999999999999999999998887777666544334
Q ss_pred HHHHHHHHHHHHHhhcccchHhHHHHHHhcCC-------CCchhhHHHHHHhhhhhHHHHHHhhHHHhhhccCc
Q 014481 202 FMPGLVLSRVLVGIGEGVSPSAATDLIARSIP-------LEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGW 268 (423)
Q Consensus 202 ~~~~~~~~~~l~G~~~~~~~~~~~~~i~~~~~-------~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw 268 (423)
+.+.+++..++.|++.+...+...++++|..+ ++.+|.++|+++....+|..+|+.+.|.+.+..||
T Consensus 310 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~g~~lg~~i~g~ll~~~G~ 383 (437)
T TIGR00792 310 NLPLILVLIILAGFGQNFVTGLVWALVADTVDYGEWKTGVRAEGLVYSVRTFVRKLGQALAGFLVGLILGIIGY 383 (437)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhcCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 55667777888999999888999999988865 45679999999999999999999999999887766
No 174
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.32 E-value=2.9e-11 Score=114.21 Aligned_cols=189 Identities=17% Similarity=0.087 Sum_probs=141.2
Q ss_pred CCCchhHHHHHHHHHHHHHHHhhhhhhhhhHHHhhhhhCCCcchhhHHHHHHHHHHHhhhhhhhhHhhHhcCchHHHHHH
Q 014481 107 KNIPQRYKLIGTTSLAFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGV 186 (423)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~ 186 (423)
++...|+...+.+.+.......+.+....+...+.++-|++..++-++.....+...+..+++..+.||+|||+.++.+.
T Consensus 263 ~~~~lR~~~~i~~~v~~~qq~sGi~ai~~Yst~i~~~aG~~~~~a~~an~~~g~v~~~~t~~~~~lid~~gRRpLll~~~ 342 (485)
T KOG0569|consen 263 KNPTLRRPLLIGIVVSFAQQFSGINAIFFYSTSIFKTAGFTPEEAQYANLGIGIVNLLSTLVSPFLIDRLGRRPLLLISL 342 (485)
T ss_pred cCcchhHHHHHHHHHHHHHHhcCcceeHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHH
Confidence 33344555555666666666666667777777788999999999999999999999999999999999999999999998
Q ss_pred HHHHHHHHHHHHhh---hHH--H---HHHHHHHHHHhhcc-cchHhHHHHHHhcCCCCchhhHHHHHHhhhhhHHHHHHh
Q 014481 187 LIWSLATALLPLLA---GFM--P---GLVLSRVLVGIGEG-VSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLL 257 (423)
Q Consensus 187 ~~~~~~~~~~~~~~---~~~--~---~~~~~~~l~G~~~~-~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~ 257 (423)
.+..+..+++.... +.. | ..+++.++..++.+ +..|...-+.+|.+|++.|..++++......++..+-..
T Consensus 343 ~~~~~~~~~~~~~~~l~~~~~~~~~y~~i~~~~~~~~~f~~G~gpi~~fi~aELf~~~~R~aa~s~~~~~~w~~~fiv~~ 422 (485)
T KOG0569|consen 343 SLMAVALLLMSIALFLSNSFGSWLSYLCIAAIFLFIISFAIGPGPIPWFIGAELFPQSARSAAQSVATAVNWLSNFIVGF 422 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhhcCCCchhHHHHHHhCCccchHHHHHHHHHHHHHHHHHHHH
Confidence 88888776553221 221 1 22344444443333 335788899999999999999999999999998888888
Q ss_pred hHHHhhhccCchHHHHHHHHHHHHH-HHHHHhhccCCcCc
Q 014481 258 LAPPIIENLGWESVFYIFGLLGIAW-FSGFKILQEGETSN 296 (423)
Q Consensus 258 ~~~~l~~~~gw~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 296 (423)
.-..+.+..|- +.|+...+.+++. +..+..+||++.+.
T Consensus 423 ~fp~l~~~~g~-~~filF~i~~~~~~i~~~~~lPETkgr~ 461 (485)
T KOG0569|consen 423 AFPPLQNVIGP-YVFILFVIPLAIFLIYLYRYLPETKGRT 461 (485)
T ss_pred HHHHHHHHhcc-hhhHHHHHHHHHHHHHHHHhCcccCCCC
Confidence 88778777776 6677777776554 55666778877554
No 175
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=99.32 E-value=1.4e-10 Score=110.04 Aligned_cols=144 Identities=16% Similarity=0.146 Sum_probs=114.5
Q ss_pred HHHhhhhhCCCcchhhHHHHHHHHHHHhhhhhhhhHhhHhcCchHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhh
Q 014481 137 IIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPLLAGFMPGLVLSRVLVGIG 216 (423)
Q Consensus 137 ~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~ 216 (423)
.|.+.+++|.+..+.+++...+.++..++.++.+++.||.+ |+.++.+..+..+...++....++.+.+.+..++.|++
T Consensus 240 ~p~~~~~~g~s~~~~g~~~~~~~~~~iig~~~~~~l~~r~~-~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~G~~ 318 (394)
T PRK10213 240 RPVYMNLAGFGVDGLTLVLLSFGIASFVGTSLSSFILKRSV-KLALAGAPLVLAVSALVLTLWGSDKIVATGVAIIWGLT 318 (394)
T ss_pred HHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHhccc-hhHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHH
Confidence 46677788999999999999999999999999999999964 44444444443343333323455567777788999999
Q ss_pred cccchHhHHHHHHhcCCCCchhhHHHHHHhhhhhHHHHHHhhHHHhhhccCchHHHHHHHHHHHHH
Q 014481 217 EGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAW 282 (423)
Q Consensus 217 ~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~~~~~~~~~~~~ 282 (423)
.+...+...+++.+..| ++++++.++.....++|..+|+.++|.+.+..|++..++..+++.++.
T Consensus 319 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~lg~~~G~~l~G~l~~~~g~~~~~~~~~~~~~~~ 383 (394)
T PRK10213 319 FALVPVGWSTWITRSLA-DQAEKAGSIQVAVIQLANTCGAAIGGYALDNIGLTSPLMLSGTLMLLT 383 (394)
T ss_pred HHhhhHHHHHHHHHHCc-ccHHHHHHHHHHHHHHHHHHHHHHHHHHHhccChhhHHHHHHHHHHHH
Confidence 98888888888888887 667788888888999999999999999999999998888877665444
No 176
>PRK10091 MFS transport protein AraJ; Provisional
Probab=99.32 E-value=1.4e-10 Score=109.69 Aligned_cols=148 Identities=17% Similarity=0.118 Sum_probs=109.0
Q ss_pred HHHhhhhhCCCcchhhHHHHHHHHHHHhhhhhhhhHhhHhcCchHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhh
Q 014481 137 IIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPLLAGFMPGLVLSRVLVGIG 216 (423)
Q Consensus 137 ~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~ 216 (423)
.|.+.+.+|.++.+.+++.+...++..++.++.|++.||+|+|+.+.++..+.+++.++.....++.+..+++.++.+++
T Consensus 223 ~~~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~~r~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~g 302 (382)
T PRK10091 223 KPYMMFISGFSETSMTFIMMLVGLGMVLGNLLSGRLSGRYSPLRIAAVTDFIIVLALLMLFFFGGMKTASLIFAFICCAG 302 (382)
T ss_pred HHHHHHhcCCCHHHHHHHHHHHHHHHHHHhHHHheeccccCchhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 34566668999999999999999999999999999999999999999888887777655534444445555666666666
Q ss_pred cccchHhHHH-HHHhcCCCCchhhHHHHHHhhhhhHHHHHHhhHHHhhhc-cCchHHHHHHHHHHHHHHHHH
Q 014481 217 EGVSPSAATD-LIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIEN-LGWESVFYIFGLLGIAWFSGF 286 (423)
Q Consensus 217 ~~~~~~~~~~-~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~-~gw~~~~~~~~~~~~~~~~~~ 286 (423)
.....+.... ...+..+++.++.+ ..+....+|..+||.++|++.+. .+|++.+++.+++.++.....
T Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~g~~~Gp~~~G~l~~~~~~~~~~~~~~~~~~~~~~~~~ 372 (382)
T PRK10091 303 LFALSAPLQILLLQNAKGGELLGAA--GGQIAFNLGSAIGAYCGGMMLTLGLAYNYVALPAALLSFAAMSSL 372 (382)
T ss_pred HHhhhHHHHHHHHHhCCcchHHHHH--HHHHHHHHHHHHHHHHhHHHHHcccCcchHHHHHHHHHHHHHHHH
Confidence 5444444343 33444444444444 34667889999999999999985 689999999887776554333
No 177
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=99.31 E-value=5.3e-11 Score=108.12 Aligned_cols=177 Identities=18% Similarity=0.121 Sum_probs=138.4
Q ss_pred HHHHHHHHHHHHHhhhhhhhhh-HHHhhhhhCCCcchhhHHHHHHHHHHHhhhhhhhhHhhHhcCchHHHHHHHHHHHHH
Q 014481 115 LIGTTSLAFVICNMDKVNLSVA-IIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLAT 193 (423)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~ 193 (423)
.+....++.++..=+.+..... ...-..++|++..+..++.....+..+++++++|++.||+|.|+++.++.+++.+.+
T Consensus 253 ~i~~FLiA~~~~~DGv~til~~~~~fg~~~~gls~~~lll~g~~~~vvA~lg~ii~g~Ld~rfg~k~vl~~~lvi~~~~~ 332 (438)
T COG2270 253 NLVLFLIARFFYIDGVNTILAMGGVFGAADLGLSSTELLLIGIALSVVAALGAIIAGFLDERFGSKPVLMIGLVILSIAA 332 (438)
T ss_pred chHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCceeehHHHHHHHHHH
Confidence 3444444444333222333333 333445999999999999999999999999999999999999999999999888877
Q ss_pred HHHHHhhhHHHHHHHHHHHHHhhcccchHhHHHHHHhcCCCCchhhHHHHHHhhhhhHHHHHHhhHHHhhhccC-chHHH
Q 014481 194 ALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLG-WESVF 272 (423)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g-w~~~~ 272 (423)
+.. .+...-..++++..+.|+..|..++..-++.++..|+++-++.+|+++.....++.+||.+.+.+.+..| -|..+
T Consensus 333 ~~~-~~~~~~~~f~i~gll~g~s~G~~qA~SRSy~~~lvp~~k~~~fFglyaltgra~S~~gp~lv~v~t~iTg~~r~g~ 411 (438)
T COG2270 333 LYL-IFLEGELDFWILGLLVGTSLGGAQASSRSYLARLVPKGKEGRFFGLYALTGRAASFLGPFLVAVITQITGSSRAGV 411 (438)
T ss_pred HHH-HHccccHHHHHHHHHHHHhcchHHHHHHHHHHHhCCCccccceeehhhhhhhHHHHHHHHHHHHHHHHhcchhhHH
Confidence 655 3333335677788999999999999999999999999999999999999999999999999999988755 66666
Q ss_pred HHHHHHHHHHHHHHHhhccC
Q 014481 273 YIFGLLGIAWFSGFKILQEG 292 (423)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~ 292 (423)
....++.++.++..+.++.+
T Consensus 412 ~~i~vll~iGl~~L~~v~~~ 431 (438)
T COG2270 412 LSIIVLLLIGLLLLLRVKVP 431 (438)
T ss_pred HHHHHHHHhhHhhEEeecCC
Confidence 66666666666666666554
No 178
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=99.30 E-value=4.2e-11 Score=108.75 Aligned_cols=173 Identities=22% Similarity=0.209 Sum_probs=135.0
Q ss_pred HHHHHHHHHHHHhhhhhhhhhHHH-hhhhhCCCcchhhHHHHHHHHHHHhhhhhhhhHhhHhcCchHHHHHHHHHHHHHH
Q 014481 116 IGTTSLAFVICNMDKVNLSVAIIP-MSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATA 194 (423)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~ 194 (423)
.+.+++.++..+...-.++..+|. +.++|+.++.+.|.....+.+...+..+.+|+++||+|.+|++.+....++++..
T Consensus 220 ~W~lsllY~~tFG~Fvgfs~~l~~~~~~~fg~~~~~Ag~~a~~f~~~g~l~Rp~GG~LsDR~Gg~rv~~~~f~~~~~~~~ 299 (417)
T COG2223 220 TWLLSLLYFATFGGFVGFSAYLPMYLVTQFGLSPVTAGLIAFLFPLIGALARPLGGWLSDRIGGRRVTLAVFVGMALAAA 299 (417)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHHHHhccchhhhhccchhHHHHHHHHHHHHHH
Confidence 445666666666666677777777 6778999999999999999999999999999999999999999999888888887
Q ss_pred HHHHhh------hHHHHHHHHHHHHHhhcccchHhHHHHHHhcCCCCchhhHHHHHHhhhhhHHHHHHhhHHHhhhccC-
Q 014481 195 LLPLLA------GFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLG- 267 (423)
Q Consensus 195 ~~~~~~------~~~~~~~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g- 267 (423)
+..... .+....++..+..++..|........++..+++ ++-|.+.|+.....++|+..-|..-+...+..|
T Consensus 300 ~l~~~~~~~~~~~~~~~~~~~~l~l~~~~G~GnGsvfk~Ip~if~-~~~G~v~G~vga~G~lGGf~lp~~~g~~~~~tg~ 378 (417)
T COG2223 300 LLSLFLTGFGHGGSFVVFVAVFLALFVFAGLGNGSVFKMIPVIFP-KETGAVTGIVGAIGGLGGFFLPLAFGVSLDLTGS 378 (417)
T ss_pred HHHccccccccCcchHHHHHHHHHHHHHhccCcchheeechHHHH-hhhhHHHHHHHHhccccccchhHHHHHHHHhccc
Confidence 765443 333333333333333334334445677778887 689999999999999999999999999988877
Q ss_pred chHHHHHHHHHHHHHHHHHHhh
Q 014481 268 WESVFYIFGLLGIAWFSGFKIL 289 (423)
Q Consensus 268 w~~~~~~~~~~~~~~~~~~~~~ 289 (423)
+...|++.....+++.+..+..
T Consensus 379 ~~~~f~~~~~~~~~a~v~~~~~ 400 (417)
T COG2223 379 YTGAFMLLLAFYLVALVLTWAL 400 (417)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
Confidence 8999999888888776655544
No 179
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=99.30 E-value=2e-11 Score=118.66 Aligned_cols=156 Identities=17% Similarity=0.130 Sum_probs=104.6
Q ss_pred hhhhHHH-hhhhhCCCcchhhHHHHHHHHHHHhhhhhhhhHhhHhcCch-------HHHHHHHHHHHHHHHHHHhhhHHH
Q 014481 133 LSVAIIP-MSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRK-------VLQTGVLIWSLATALLPLLAGFMP 204 (423)
Q Consensus 133 ~~~~~~~-~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~-------~~~~~~~~~~~~~~~~~~~~~~~~ 204 (423)
....+|. +.+++|.+..+.+.+.+++.++..++.+++|+++||+|||+ .+.+..++.++..++. ...++.+
T Consensus 271 ~~~~~p~~l~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~~~r~~~~~r~~~~~~~~~l~~i~~~~~-~~~~~~~ 349 (476)
T PLN00028 271 MDNIIAEYFYDRFGLSLETAGAIAASFGLMNLFARPAGGYLSDVAARRFGMRGRLWALWIVQTLGGVFCIWL-GRANSLG 349 (476)
T ss_pred HHhHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHhcCcchhHHHHHHHHHHHHHHHHHh-cccchHH
Confidence 3334554 45678999999999999999999999999999999998752 2222223322322232 2333444
Q ss_pred HHHHHHHHHHhhcccchHhHHHHHHhcCCCCchhhHHHHHHhhhhhHHHHHHhhHHHhhhccCchHHHHHHHHHHHHHHH
Q 014481 205 GLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAWFS 284 (423)
Q Consensus 205 ~~~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~~~~~~~~~~~~~~ 284 (423)
..++..++.+++.+...+...+++.+..| +++|.+.|+.+.+..+|+.++|.+.+ ..+..+|+..|++.+++.++..+
T Consensus 350 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~g~lg~~i~~~l~~-~~~~~~y~~~f~~~~~~~~i~~~ 427 (476)
T PLN00028 350 AAIVVMILFSIFVQAACGATFGIVPFVSR-RSLGVISGLTGAGGNVGAVLTQLLFF-TGSSYSTETGISLMGVMIIACTL 427 (476)
T ss_pred HHHHHHHHHHHHHHHhhhhhcccCcccCh-hhchhhhhhhhccccHHHHHHHHHHH-hcCCccHhhHHHHHHHHHHHHHH
Confidence 44445555566554444445555666544 78999999988877777777776644 22234699999999888887777
Q ss_pred HHHhhcc
Q 014481 285 GFKILQE 291 (423)
Q Consensus 285 ~~~~~~~ 291 (423)
+.++++.
T Consensus 428 ~~~~~~~ 434 (476)
T PLN00028 428 PVAFIHF 434 (476)
T ss_pred HHHheec
Confidence 6666653
No 180
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=99.30 E-value=1.8e-10 Score=109.92 Aligned_cols=152 Identities=14% Similarity=-0.009 Sum_probs=116.1
Q ss_pred hhhhHHH-hhhhhCCCcchhhHHHHHHHHHHHhhhhhhhhHhhHhcCchHHHHHHHHHHHHHHHHHHhh----hHHHHHH
Q 014481 133 LSVAIIP-MSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPLLA----GFMPGLV 207 (423)
Q Consensus 133 ~~~~~~~-~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~----~~~~~~~ 207 (423)
.....|. +.+++|.++.+.++......++..++.++.|++.||+|+|+.+.++.++.+++.++..... .+++.++
T Consensus 234 ~~~~~p~~~~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~~r~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 313 (406)
T PRK15402 234 WIALSPVILISGEQLSSYEYGLLQVPVFGALIAGNLTLARLTSRRPLRSLIRMGLWPMVAGLLLAALATVISSHAYLWLT 313 (406)
T ss_pred HHHHhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHH
Confidence 3334455 4567899999999988888888999999999999999999999888877766665553322 3445667
Q ss_pred HHHHHHHhhcccchHhHHHHHHhcCCCCchhhHHHHHHhhhhhHHHHHHhhHHHhhhccCchHHHHHHHHHHHHHHHH
Q 014481 208 LSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAWFSG 285 (423)
Q Consensus 208 ~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~~~~~~~~~~~~~~~ 285 (423)
+..++.|++.+...+......... ++++||++.++++....+|..+|+.+++.+.+..++....+..++..++.++.
T Consensus 314 ~~~~~~g~g~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 390 (406)
T PRK15402 314 AGLSLYAFGIGLANAGLYRLTLFS-SDVSKGTVSAAMGMLSMLIFTVGIELSKHAYLGGGNGLFNLFNLANGLLWLLL 390 (406)
T ss_pred HHHHHHHHHHHHHhhhHHHHHhhh-ccccccHHHHHHHHHHHHHHHHHHHHHHhcccCCchHHHHHHHHHHHHHHHHH
Confidence 778889998887776665555443 44899999999999999999999999999998888776666655555544333
No 181
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=99.29 E-value=1.3e-09 Score=94.55 Aligned_cols=177 Identities=15% Similarity=0.127 Sum_probs=129.7
Q ss_pred HHHHHHHHHHHHHHHhhhhhhhhhHHHhhhhhCCCcchhhHHHHHHHHHHHhhhhhhhhHhhHhcCchHHHHHHHHHHHH
Q 014481 113 YKLIGTTSLAFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLA 192 (423)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~ 192 (423)
|..+....... ......+.++.+-|.+.+.+|+|.++...+.+...+|..+ .++.|.+.|++|++.++.+|.+...++
T Consensus 2 W~~l~a~~~v~-~~~Gt~Y~Fs~yS~~Lk~~l~~sq~~l~~l~~~~~~G~~~-G~~~G~l~d~~gp~~~l~iG~~~~~~G 79 (250)
T PF06813_consen 2 WLSLVASIWVQ-LCSGTTYTFSAYSPQLKSRLGYSQSQLNTLSTAGDIGSYF-GILAGLLYDRFGPWVVLLIGAVLGFVG 79 (250)
T ss_pred hhhHHHHHHHH-HhcCcccchhhhhHHHHHHhCCCHHHHHHHHHHHHHHhhc-cHHHHHHHHhcchHHHHHHHHHHHHHH
Confidence 44443333333 3334567788888999999999999999999999999986 588999999999999999999998888
Q ss_pred HHHHHHhh------hHHHHHHHHHHHHHhhcccchHhHHHHHHhcCCCCchhhHHHHHHhhhhhHHHHHHhhHHHhhhcc
Q 014481 193 TALLPLLA------GFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENL 266 (423)
Q Consensus 193 ~~~~~~~~------~~~~~~~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~ 266 (423)
..+..... .++|.+.+..++.|.+.+....+......+.|| ++||++.|+.-...++++.+-..+...+.+.-
T Consensus 80 Y~~~~l~~~~~i~~~~~~~~~~~~~l~~~s~~~~~ta~lvt~~~NFP-~~RG~vvgilk~~~GLSaai~t~i~~~~f~~~ 158 (250)
T PF06813_consen 80 YGLLWLAVSGRIPSLPVWLMCLFLFLGGNSSCWFNTASLVTCVRNFP-RSRGTVVGILKGFFGLSAAIFTQIYSAFFGDD 158 (250)
T ss_pred HHHHHHHHhCccCccchHHHHHHHHHHcccHHHhhhHHHHHHHHhCc-cccCceehhhhHHHHhHHHHHHHHHHHHcCCC
Confidence 87664332 345677777777778776666676677778888 68999999999999999888887777766552
Q ss_pred CchHHHHHHHHH-HHHHHHHHHhhccCC
Q 014481 267 GWESVFYIFGLL-GIAWFSGFKILQEGE 293 (423)
Q Consensus 267 gw~~~~~~~~~~-~~~~~~~~~~~~~~~ 293 (423)
.-. .+...+.. .++.++..++++..+
T Consensus 159 ~~~-fll~la~~~~~v~l~~~~~vr~~~ 185 (250)
T PF06813_consen 159 PSS-FLLFLAVLPAVVCLVAMFFVRPVP 185 (250)
T ss_pred hHH-HHHHHHHHHHHHHHHHhhheeccC
Confidence 233 33333333 344455555555443
No 182
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=99.28 E-value=7.4e-11 Score=113.95 Aligned_cols=176 Identities=20% Similarity=0.185 Sum_probs=151.7
Q ss_pred HHHHHHHHHHHHHHhhhhhhhhhHHHhhhhhCCCcchhhHHHHHHHHHHHhhhhhhhhHhhHhcC--chHHHHHHHHHHH
Q 014481 114 KLIGTTSLAFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGG--RKVLQTGVLIWSL 191 (423)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~--r~~~~~~~~~~~~ 191 (423)
+.+..+.+...+..+...+....+|.+.++.+.+..+.+.+.++..+...++.++.|+++|+... +....++.++.++
T Consensus 298 ~~fl~~~~~~~~~~~g~~~p~~~l~~~~~~~g~~~~~aa~l~Siigi~~i~gRi~~G~laD~~~~~~~~~~~~~ll~~gl 377 (509)
T KOG2504|consen 298 PKFLLLALSNLFAYLGFNVPFVYLPSYAKSLGLSSNDAAFLLSIIGVSDIIGRIILGLLADKPGIRALVLFLLTLLIAGL 377 (509)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCChhhhHHHHHHHHHhhhhhhhhhhhhcCccccchHHHHHHHHHHHHH
Confidence 45566677777777888888888999999999999999999999999999999999999999884 4445556666666
Q ss_pred HHHHHHHhhhHHHHHHHHHHHHHhhcccchHhHHHHHHhcCCCCchhhHHHHHHhhhhhHHHHHHhhHHHhhhccC-chH
Q 014481 192 ATALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLG-WES 270 (423)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g-w~~ 270 (423)
..+.+ ...++++.++...++.|++.|.........+.|..+.++-..++|+...+.+++.++||+++|.+.+..| |..
T Consensus 378 ~~~~~-p~~~~~~~l~~~~~~fG~~~g~~~~l~~~i~~~~~g~~~l~~a~Gl~l~~~gi~~l~gpPiag~~~d~tg~Y~~ 456 (509)
T KOG2504|consen 378 ARLFL-PFATTYVGLIVFSILFGFCVGSFSSLTPVILVDLVGLEKLSNAYGLLLLFQGIGALVGPPIAGLLYDITGNYDH 456 (509)
T ss_pred HHHHH-HHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChhhcchHHHHHHHHhHHHHHcCcccceeeeeccCCeee
Confidence 65444 4567778999999999999999988888899999999999999999999999999999999999998877 999
Q ss_pred HHHHHHHHHHHHHHHHHhhc
Q 014481 271 VFYIFGLLGIAWFSGFKILQ 290 (423)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~ 290 (423)
.|+..++..++.....++.+
T Consensus 457 ~f~~~g~~~~~s~~~~~~~~ 476 (509)
T KOG2504|consen 457 AFYFCGLCFLLSAVLLLILR 476 (509)
T ss_pred ehhhcChHHHHHHHHHHHhH
Confidence 99999999888877777666
No 183
>TIGR00898 2A0119 cation transport protein.
Probab=99.27 E-value=1.1e-10 Score=114.90 Aligned_cols=149 Identities=17% Similarity=-0.022 Sum_probs=113.7
Q ss_pred hhhhCCCcchhhHHHHHHHHHHHhhhhhhhhHhhHhcCchHHHHHHHHHHHHHHHHHHhhhH-HHHHHHHHHHHHhhccc
Q 014481 141 SHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPLLAGF-MPGLVLSRVLVGIGEGV 219 (423)
Q Consensus 141 ~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~G~~~~~ 219 (423)
...++.+. .+...+..+...++.++.+++.||+|||+.+.++.++.+++.++.....+. .+..++..++.+++.+.
T Consensus 350 ~~~~~~~~---~~~~~~~~~~~i~~~~~~~~l~dr~grr~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 426 (505)
T TIGR00898 350 LGNLGGNI---YLDLFISGLVELPAKLITLLLIDRLGRRYTMAASLLLAGVALLLLLFVPVDLYFLRTALAVLGKFGITS 426 (505)
T ss_pred ccccCCCh---HHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHH
Confidence 33444443 233445566777888999999999999999999988888877666443332 23444555666777777
Q ss_pred chHhHHHHHHhcCCCCchhhHHHHHHhhhhhHHHHHHhhHHHhhhccCchHHHHHHHHHHHHHHHHHHhhccCCc
Q 014481 220 SPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAWFSGFKILQEGET 294 (423)
Q Consensus 220 ~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (423)
..+....+.+|.+|++.|++++|+.+....+|.+++|.+.+ + ...++..++++.++..++..+..+++||+..
T Consensus 427 ~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~ig~~i~p~i~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~lpet~~ 499 (505)
T TIGR00898 427 AFQMVYLYTAELYPTVVRNLGVGVCSTMARVGSIISPFLVY-L-GEKWLFLPLVLFGGLALLAGILTLFLPETKG 499 (505)
T ss_pred HHHHHHHHhcccccHHHHhhhHhHHHHHHHHHHHHHhHHHH-H-HHHHHhhHHHHHHHHHHHHHHHHHcCcCCCC
Confidence 77888999999999999999999999999999999999998 4 3446777888888888777777777776554
No 184
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=99.27 E-value=1.1e-10 Score=108.25 Aligned_cols=154 Identities=15% Similarity=0.104 Sum_probs=127.8
Q ss_pred HHHhhhhhCCCcchhhHHHHHHHHHHHhhhhhhhhHhhHhcCchHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhh
Q 014481 137 IIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPLLAGFMPGLVLSRVLVGIG 216 (423)
Q Consensus 137 ~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~ 216 (423)
...+-++-+.++...|.+.++..+.-++.-.+..++.+|+|.|+.++++.+++++=..++ .++++.+.+.+.+.+.|+-
T Consensus 247 ~~~~f~~~~~g~~~~G~l~s~~v~~E~~~m~~~p~li~rig~k~~Lllag~i~~iRi~~~-~~~~~~~~i~~~klLH~~e 325 (412)
T PF01306_consen 247 FASFFQSAGQGNQMYGYLWSVQVFLEALMMFFSPWLINRIGAKNLLLLAGVIMAIRIIGS-GFATNPWVISLIKLLHALE 325 (412)
T ss_dssp HHHTSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHH-HT--SHHHHHHHHHHHHHH
T ss_pred HHHHhcccccChhHHhHHHHHHHHHHHHHHHHHHHHHHhcChHhHHHHHHHHHHHHHHHH-hhhcchHHHHHHHHHHHHH
Confidence 333333444556778999999999999999999999999999999999999988877666 5677778999999999999
Q ss_pred cccchHhHHHHHHhcCCCCchhhHHHH-HHhhhhhHHHHHHhhHHHhhhccCchHHHHHHHHHHHHHHHHHHhhcc
Q 014481 217 EGVSPSAATDLIARSIPLEERSRAVSF-VFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAWFSGFKILQE 291 (423)
Q Consensus 217 ~~~~~~~~~~~i~~~~~~~~r~~~~~~-~~~~~~~g~~~g~~~~~~l~~~~gw~~~~~~~~~~~~~~~~~~~~~~~ 291 (423)
.+........++++.+|++-.++...+ .+...++|..+.+.++|.+.|+.|.+.+|++.+.+.++..+...+..+
T Consensus 326 ~~l~lva~fkYI~~~fd~rlsAt~y~v~~~~~~~~~~~i~s~~~G~lyd~~G~~~tylimg~iv~~~~li~~f~l~ 401 (412)
T PF01306_consen 326 FPLLLVAAFKYITAHFDKRLSATLYLVGFQFAKQIGIIILSPLAGYLYDRIGFQHTYLIMGLIVLPFTLISAFTLK 401 (412)
T ss_dssp HHHHHHHHHHHHHHHS-GGGHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS-
T ss_pred HHHHHHHHHHHHHHhCCHhHHHHHHHHHHHHHHHHHHHHHhhhHHhhHhhcCcHHHHHHHHHHHHHHHHHheeeec
Confidence 999999999999999998888888887 578999999999999999999999999999999888776555544433
No 185
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=99.27 E-value=8.4e-11 Score=114.32 Aligned_cols=176 Identities=16% Similarity=0.046 Sum_probs=118.2
Q ss_pred HHHHHHHHHHHHHhhhhhhhhhHHHh-hhhhCCCcchhhHHHHHHHHHHHhhhhhhhhHhhHhcCchHH--------HHH
Q 014481 115 LIGTTSLAFVICNMDKVNLSVAIIPM-SHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVL--------QTG 185 (423)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~--------~~~ 185 (423)
.+..+.+..+............+|.+ .+.+|.+..+.++..++..++..++.++.|+++||+++|+.. ..+
T Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~d~~~~~~~~~~~~~~~~~~~ 341 (465)
T TIGR00894 262 PVWAIWFAIFGHFWLYTILPTYLPTFISWVLRVSGKENGLLSSLPYLFAWLCSIFAGYLADFLKSSKTLSLTAARKIFNG 341 (465)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcChHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHH
Confidence 34455555566666666666677764 566899999999999999999999999999999998755321 111
Q ss_pred HHHHHHHHHH--HHHhhhHHHHHHHHHHHHHhhcccchHhHHHHHHhcCCCCchhhHHHHHHhhhhhHHHHHHhhHHHhh
Q 014481 186 VLIWSLATAL--LPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPII 263 (423)
Q Consensus 186 ~~~~~~~~~~--~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~ 263 (423)
..+...+..+ ......+....+++-.+.+.+.+...+.......+..| +.+|.+.++.+....+|+.++|.+.+.+.
T Consensus 342 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~l~~~i~p~l~g~~~ 420 (465)
T TIGR00894 342 IGGLGPGIFAYALPYLSAAFYLTIIILTLANAVSSGPLAGVLINSLDLAP-RFLGFIKGITGLPGFIGGLIASTLAGNIL 420 (465)
T ss_pred HHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHhhhhhhhhhhchhhcCh-hHHHHHHHHHHHHHHHHHHHHHHhhheee
Confidence 1111111111 11112233334444455555555555555555566666 58999999999999999999999999988
Q ss_pred hcc---CchHHHHHHHHHHHHHHHHHHhhcc
Q 014481 264 ENL---GWESVFYIFGLLGIAWFSGFKILQE 291 (423)
Q Consensus 264 ~~~---gw~~~~~~~~~~~~~~~~~~~~~~~ 291 (423)
+.. +|...|.+.++..++..+...++.+
T Consensus 421 ~~~~~~~~~~~f~~~~~~~~i~~i~~~~~~~ 451 (465)
T TIGR00894 421 SQDSKNVWLIVFLIMAFVNILCVIFYLIFGS 451 (465)
T ss_pred CCCCchHHHHHHHHHHHHHHHHHHHeeeeec
Confidence 653 3888888888877776665555443
No 186
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=99.26 E-value=3e-10 Score=106.97 Aligned_cols=171 Identities=19% Similarity=0.256 Sum_probs=131.0
Q ss_pred HHHHHHHHHhhhhhhhhhHHHhhhhhC-CCcchhhHHHHHHHHHHHhhhhhhhhHhhHhcCchHHHHHHHHHHHHHHHHH
Q 014481 119 TSLAFVICNMDKVNLSVAIIPMSHRFG-WNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLP 197 (423)
Q Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~ 197 (423)
..+..++.......+..+.+.+.++.| .+....+.+.++..+.-++.-...+++..|+|.|+++.++.+.+++=..+++
T Consensus 212 Fll~~~l~~~~~~~~~~f~~~yl~~~gg~~~~~~g~~~~l~~~aEi~~f~~~~~~~~r~g~~~ll~~a~~~~~vR~~l~a 291 (400)
T PF03825_consen 212 FLLAAFLIGISHAAYYTFFSIYLQELGGYSGSTIGILWALGVVAEIPFFFFSGRFLKRFGIKWLLLLALVAYAVRWLLYA 291 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHH
Confidence 333444555556666666777777887 6777788888888888889999999999999999999999999888877776
Q ss_pred HhhhHHHHHHHH----HHHHHhhcccchHhHHHHHHhcCCCCchhhHHHHHHh-hhhhHHHHHHhhHHHhhhccCchH--
Q 014481 198 LLAGFMPGLVLS----RVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFG-GLSFGSVAGLLLAPPIIENLGWES-- 270 (423)
Q Consensus 198 ~~~~~~~~~~~~----~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~-~~~~g~~~g~~~~~~l~~~~gw~~-- 270 (423)
..+++.+..++. ..+.|+..+..+.....++.+..|++.|+++.++++. ..++|..+|..++|++.+++|-+.
T Consensus 292 ~~~~~~~~~~~~~~l~q~lhG~tf~~~~~a~~~yi~~~~p~~~~at~Q~l~~~~~~Glg~~iG~~igG~l~~~~g~~~~~ 371 (400)
T PF03825_consen 292 YFSDPWPFIVALQLLGQLLHGLTFGLFHAASVRYIDRIAPPELRATAQGLYSALSFGLGGAIGSLIGGWLYDAFGARGMF 371 (400)
T ss_pred HhcCCcHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCccchHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhcchhhh
Confidence 554554443333 4568999999999999999999999999999999876 568999999999999999877543
Q ss_pred ----HHHHHHHHHHHHHHHHHhh
Q 014481 271 ----VFYIFGLLGIAWFSGFKIL 289 (423)
Q Consensus 271 ----~~~~~~~~~~~~~~~~~~~ 289 (423)
.+.+.+.+.++..+++.++
T Consensus 372 ~~~~~~~v~a~~~~~~~~~f~~~ 394 (400)
T PF03825_consen 372 DWSAVFLVFAVMALVILVLFVIL 394 (400)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhh
Confidence 3444444444444444333
No 187
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=99.26 E-value=9e-11 Score=112.07 Aligned_cols=161 Identities=14% Similarity=0.094 Sum_probs=111.2
Q ss_pred HHHHHHHHHHhhhhhhhhhHHHhhhhh--CCCcchhhHHHHHHHHHHHhhhhhhhhHhhHhcCchHH-HHHHHHHHHHHH
Q 014481 118 TTSLAFVICNMDKVNLSVAIIPMSHRF--GWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVL-QTGVLIWSLATA 194 (423)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~-~~~~~~~~~~~~ 194 (423)
...+.+++.......+...+|.+.+++ |.+..+.++..+...++..++.+++|+++||+++|+.. ....++.+++..
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~p~~l~~~~~~~s~~~~~~~~~~~~l~~~~g~l~~g~l~dr~~~r~~~~~~~~~~~~~~~~ 325 (412)
T TIGR02332 246 LYTLAYFCLTNTLSAINIWTPQILQSFNQGSSNIMIGLLAAIPQFCTIFGMIWWSRHSDRLKERKHHTALPYLFAAAGWL 325 (412)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHhHHHhhHHHHHHHHHHHHHHHHhcccCccHHHHHHHHHHHHHHHH
Confidence 344445555555666677788877764 56778889999999999999999999999999987753 334334333332
Q ss_pred HHHHhhhHHHHHHHHHHHHHhhcccchHhHHHHHHhcCCCCchhhHHHHHHhhhhhHHHHHHhhHHHhhhccC-chHHHH
Q 014481 195 LLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLG-WESVFY 273 (423)
Q Consensus 195 ~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g-w~~~~~ 273 (423)
+. ....+....+++-.+.+++.....+.......+.+|+++|++++|+.+....+|..++|.+.+.+.+..| |++.++
T Consensus 326 ~~-~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~a~g~~~~~~~~g~~~~p~~~g~i~~~~g~~~~~~~ 404 (412)
T TIGR02332 326 LA-SATDHNLIQLLGIIMASMGSFSAMAIFWTTPDQSISLQARAIAIAVINATGNIGSALSPFLIGILKDATGSFNSGLW 404 (412)
T ss_pred HH-HhcCCHHHHHHHHHHHHHHhhhhhhHHHhhcccccchHHHHHHHHHHHHhhhhhhhhhhhhcccccccCCCCchhHH
Confidence 22 2222212222222233333333334444555677898999999999999999999999999999999875 999988
Q ss_pred HHHHHH
Q 014481 274 IFGLLG 279 (423)
Q Consensus 274 ~~~~~~ 279 (423)
+.++..
T Consensus 405 ~~~~~~ 410 (412)
T TIGR02332 405 FVAALL 410 (412)
T ss_pred HHHHHH
Confidence 776654
No 188
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=99.26 E-value=1.5e-10 Score=99.04 Aligned_cols=149 Identities=18% Similarity=0.155 Sum_probs=114.5
Q ss_pred HhhhhhCCCcchhhHHHHHHHHHHHhhhhhhhhHhhHhcCchHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhhcc
Q 014481 139 PMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPLLAGFMPGLVLSRVLVGIGEG 218 (423)
Q Consensus 139 ~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~ 218 (423)
.+++.+|+|+...+.+.+......++.+++.|.++||+|++.+.+.+..+..+..=...+++ .+.=++...+.|+..+
T Consensus 290 fF~~rfGlS~~~a~~i~s~vy~Isav~spvfg~i~Dk~G~n~~wv~~a~~~tl~~H~~l~Ft--~lsPy~~m~~lGLsys 367 (459)
T KOG4686|consen 290 FFQKRFGLSAVSAGNILSTVYGISAVLSPVFGAISDKYGFNLWWVASACILTLLGHSGLFFT--FLSPYTSMTFLGLSYS 367 (459)
T ss_pred HHHHhhCCChhhccchhhhhhhhhhhhhhhHHHhHhhhcceehhHHHHHHHHHHHhhhHHhh--hccHHHHHHHHhhhHH
Confidence 37889999999999999998889999999999999999999988887666555432221222 2333456677888888
Q ss_pred cchHhHHHHHHhcCCCCchhhHHHHHHhhhhhHHHHHHhhHHHhhhccC---chHH-HHHHHHHHHHHHHHHHhh
Q 014481 219 VSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLG---WESV-FYIFGLLGIAWFSGFKIL 289 (423)
Q Consensus 219 ~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g---w~~~-~~~~~~~~~~~~~~~~~~ 289 (423)
.........++...|+++.|++.|..+...++|..+.|+++|++.+.-| |--. |.+.+.+++....+.+.+
T Consensus 368 llAcslWP~va~~vpE~qLGTaygf~qsIqNLgla~i~Iiag~i~d~~g~y~~le~ffl~~~~~aL~svgil~~~ 442 (459)
T KOG4686|consen 368 LLACSLWPCVASLVPEEQLGTAYGFIQSIQNLGLAFIPIIAGFIADGDGSYDNLEAFFLIIGLMALTSVGILFYL 442 (459)
T ss_pred HHHHHHhhhhhhhCCHHHhcchHHHHHHHHhhhhhHHhhhhheeecCCCchhhHHHHHHHHHHHHHHHHHHHhhe
Confidence 7777788899999999999999999999999999999999999998755 3333 344444455544444444
No 189
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=99.23 E-value=3.5e-09 Score=105.24 Aligned_cols=155 Identities=19% Similarity=0.224 Sum_probs=124.5
Q ss_pred hhHHHhhhhhCCCcchhhHHHHHHHHHHHhhhhhhhhHhhH-hcCchHHHHHHHHHHHHHHHHHHhhh-------HHHHH
Q 014481 135 VAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKI-FGGRKVLQTGVLIWSLATALLPLLAG-------FMPGL 206 (423)
Q Consensus 135 ~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr-~G~r~~~~~~~~~~~~~~~~~~~~~~-------~~~~~ 206 (423)
.+...+.+.+|.+.+....+...+....-+.++++|+++|+ +|+++.++++.++..++.++++..+. .....
T Consensus 9 iLvlYl~~~lg~~~~~A~~i~~~f~~l~yl~pilGg~iAD~~lG~~~tIl~~~ii~~lG~~llai~a~~~~~~~~~~~~~ 88 (654)
T TIGR00926 9 ILVLYFLNFLGFSESTSTVLFHTFTYLCYLTPLIGAIIADGWLGKFKTILYLSIVYVVGHALLSFGAIPSSGHPLHDLLD 88 (654)
T ss_pred HHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhccCcccccchHHHHH
Confidence 34445666789999998889888888888999999999996 69999999999998888877643211 11335
Q ss_pred HHHHHHHHhhcccchHhHHHHHHhcCCCC---chhhHHHHHHhhhhhHHHHHHhhHHHhhhcc-------CchHHHHHHH
Q 014481 207 VLSRVLVGIGEGVSPSAATDLIARSIPLE---ERSRAVSFVFGGLSFGSVAGLLLAPPIIENL-------GWESVFYIFG 276 (423)
Q Consensus 207 ~~~~~l~G~~~~~~~~~~~~~i~~~~~~~---~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~-------gw~~~~~~~~ 276 (423)
+++..+.++|.|++-+...+...|.++++ +|...+.++..+.++|+++++++.+++.+.. +|...|.+.+
T Consensus 89 l~gLaLia~G~GgiKp~vsaf~gdqf~~~~~~~~~s~F~~fY~~iNiGSlis~~i~~~l~~~~~~fg~~~~~~~aF~i~~ 168 (654)
T TIGR00926 89 LLGLALIALGTGGIKPCVSAFGGDQFEERQLSLRSRFFSFFYFAINAGSLISTIITPILRGDVGCFGCQDCYPLAFGVPA 168 (654)
T ss_pred HHHHHHHHhhccccccCchhhhHhhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCcchHHHHHHHH
Confidence 67778888999999999999999999754 3677888999999999999999999887442 6999999988
Q ss_pred HHHHHHHHHHHhh
Q 014481 277 LLGIAWFSGFKIL 289 (423)
Q Consensus 277 ~~~~~~~~~~~~~ 289 (423)
+..++.++++...
T Consensus 169 i~m~ia~lvf~~g 181 (654)
T TIGR00926 169 ILMILALIVFMAG 181 (654)
T ss_pred HHHHHHHHHHHHh
Confidence 8887776665443
No 190
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=99.23 E-value=2.7e-10 Score=108.33 Aligned_cols=151 Identities=17% Similarity=0.131 Sum_probs=113.1
Q ss_pred hhhHHHhhhhhCCCcchhhHHHHHHHHHHHhhhhhhhhHhhH-hcCchHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHH
Q 014481 134 SVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKI-FGGRKVLQTGVLIWSLATALLPLLAGFMPGLVLSRVL 212 (423)
Q Consensus 134 ~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr-~G~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 212 (423)
....|.+.++.+.++.+.+++.++..++...+..+.+++.|| ++.++.+..+.++.+++.+++ ...++++.+++..++
T Consensus 228 ~~~~p~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~l-~~~~~~~~~~~~~~l 306 (400)
T PRK11646 228 MLMLPIMVNDIAGSPSAVKWMYAIEACLSLTLLYPIARWSEKRFRLEHRLMAGLLIMSLSMFPI-GMVSNLQQLFTLICL 306 (400)
T ss_pred HHhhhhhHHhhcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHH-HHhhhHHHHHHHHHH
Confidence 345677666665577888998888877776666666776654 666777777777777776555 345566666677778
Q ss_pred HHhhcccchHhHHHHHHhcCCCCchhhHHHHHHhhhhhHHHHHHhhHHHhhhcc---Cc-hHHHHHHHHHHHHHHHH
Q 014481 213 VGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENL---GW-ESVFYIFGLLGIAWFSG 285 (423)
Q Consensus 213 ~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~---gw-~~~~~~~~~~~~~~~~~ 285 (423)
.|++.+...|...+++.+..|+++||+++|+++....+|..+||.++|++.+.. +. ...+++.+++.++..+.
T Consensus 307 ~~~g~~~~~p~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~ig~~l~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (400)
T PRK11646 307 FYIGSIIAEPARETLSASLADARARGSYMGFSRLGLALGGAIGYIGGGWLFDLGKALNQPELPWMMLGIIGLITLLA 383 (400)
T ss_pred HHHHHHHHHccHHHHHHhcCCcccchhhhhHHHHHHHHHHHhcccchHHHHHHHhhcCCcchHHHHHHHHHHHHHHH
Confidence 888888888888999999999999999999999999999999999999999874 32 44555555555554443
No 191
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=99.21 E-value=6.9e-10 Score=103.91 Aligned_cols=139 Identities=14% Similarity=0.023 Sum_probs=107.3
Q ss_pred HhhhhhhhhhHHHhhhhhCCCcchhhHHHHHHHHHHHhhhhhhhhHhhHh-cCchHHHHHHHHHHHHHHHHHHhhhHHHH
Q 014481 127 NMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIF-GGRKVLQTGVLIWSLATALLPLLAGFMPG 205 (423)
Q Consensus 127 ~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-G~r~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (423)
..........+|.+.++.|.+..+.+++.+...++..++.++.|++.||+ +||+.+.++.++.+++.+++....++ ..
T Consensus 210 ~~~~~~~~~~lp~~~~~~g~~~~~~g~~~~~~~~~~i~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 288 (355)
T TIGR00896 210 SGLYYSLIGWLPAILISHGASAATAGSLLALMQLAQAASALLIPALARRVKDQRGIVAVLAVLQLVGLCGLLFAPMH-GL 288 (355)
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHHHHHHHHHHHhhhh-HH
Confidence 33344455567777778899999999999999999999999999999999 56666777777766666555333322 22
Q ss_pred HHHHHHHHHhhcccchHhHHHHHHhcCC-CCchhhHHHHHHhhhhhHHHHHHhhHHHhhhccC
Q 014481 206 LVLSRVLVGIGEGVSPSAATDLIARSIP-LEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLG 267 (423)
Q Consensus 206 ~~~~~~l~G~~~~~~~~~~~~~i~~~~~-~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g 267 (423)
. ...++.|++.+...+...+.+.+..+ +++++...++.+....+|..+||.+.|.+.++.|
T Consensus 289 ~-~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~gp~~~G~l~~~~g 350 (355)
T TIGR00896 289 W-AWALVLGLGQGGAFPLALTLIGLRSRQAAQAAALSAMAQSIGYLLAALGPLFVGVLHDISG 350 (355)
T ss_pred H-HHHHHHHHhhhhHhHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 2 24567899999988887777776554 4567899999999999999999999999998766
No 192
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=99.21 E-value=4.9e-10 Score=107.03 Aligned_cols=259 Identities=19% Similarity=0.173 Sum_probs=164.7
Q ss_pred hhhHHHhhhhhCCCcchhhHHHHHHHHHHHhhhhhhhhHhhHhc-----CchHHHHHHHHHHHHHHHHHHhhh---HHHH
Q 014481 134 SVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFG-----GRKVLQTGVLIWSLATALLPLLAG---FMPG 205 (423)
Q Consensus 134 ~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G-----~r~~~~~~~~~~~~~~~~~~~~~~---~~~~ 205 (423)
....+.+.+++|+++++...+.++..+... ..+++|.++|-+. ||+-++++.++.+++.+.++..+. +...
T Consensus 10 ~~~~~~l~~~l~ls~~~~~~~~~~~~lPw~-~Kp~~g~lsD~~pi~G~rr~~Y~~i~~~~~~~~~~~~~~~~~~~~s~~~ 88 (433)
T PF03092_consen 10 LAIYPFLKDDLGLSPAQLQRLSSLASLPWS-IKPLYGLLSDSFPIFGYRRKPYMIIGWLLGAVSALVLALLPASESSAAI 88 (433)
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHhCchH-HhhhHHhhcccccccCCcchHHHHHHHHHHHHHHHHHHhcccccchhhh
Confidence 345677889999999999999888888875 5778899999873 455556666665444444433332 4556
Q ss_pred HHHHHHHHHhhcccchHhHHHHHHhcCC--CCchhhHHHHHHhhhhhHHHHHHhhHHHhhhccCchHHHHHHHHHHHHHH
Q 014481 206 LVLSRVLVGIGEGVSPSAATDLIARSIP--LEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAWF 283 (423)
Q Consensus 206 ~~~~~~l~G~~~~~~~~~~~~~i~~~~~--~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~~~~~~~~~~~~~ 283 (423)
..++-++..+|......+..+++.|... ++.||...+.......+|.+++..++|.+.+..++++.|.+.+++..+..
T Consensus 89 ~~~~l~la~~g~a~~DV~aDa~vvE~~~~~p~~~g~lqS~~~~~~~~G~lv~~~l~G~l~~~~~~~~~f~i~~~~~~l~~ 168 (433)
T PF03092_consen 89 AVVLLFLASFGYAFADVAADALVVELARREPESRGDLQSFVWGVRSVGSLVGSLLSGPLLDSFGPQGVFLISAALPLLML 168 (433)
T ss_pred HHHHHHHHHHHHHHHHHhhhHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHHHHhhhhhhhcCCCeEEehHHHHHHHHHH
Confidence 6677788889999999999999999883 34478888899999999999999999999999999999999888877765
Q ss_pred HHHHhhccCCcCcCCCC-C--cchhhhhhhhhhhhhHHhhccccCCCcHHHhhhcHHHHHHHH-HHHHHHHHHHHHHhhh
Q 014481 284 SGFKILQEGETSNGATL-A--PRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIY-AHFCGSWGHYTCLSWL 359 (423)
Q Consensus 284 ~~~~~~~~~~~~~~~~~-~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~~~~~~~~~~~~~~ 359 (423)
+..+++.++++...... . .++.........++. ...+++.++.+.+|...+ ..++............
T Consensus 169 ~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~a~~ 239 (433)
T PF03092_consen 169 IVALFLLEERKVRPADEVFSFGKEEVPCLFGSFREQ---------LSELWRALQQRAIWQPILFFIFFFNLPPSISSASS 239 (433)
T ss_pred HHHHHhhhhccccccchhhcccccccchhhHHHHHH---------HHHHHHHHhhhHHHHHHHHHHHHHHhccCCCCccE
Confidence 55555555422111110 0 000000000000111 112467777888887666 3332222221111101
Q ss_pred hHHHHHhhC---CChhhHHHHHHHHHHHHHHHHHHHHHHhHHhhhc
Q 014481 360 PTYFSEELS---LNLTEAAWVSILPPLASVLVTSIAAQFADNLIAT 402 (423)
Q Consensus 360 ~~~~~~~~g---~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~r 402 (423)
-.+..+..+ +++...+.+..+..++.++|..+......+..-|
T Consensus 240 fy~~~~~~~gp~fs~~f~~~~~~vg~~~~l~g~~~y~~~~~~~~~R 285 (433)
T PF03092_consen 240 FYFQTDALGGPHFSPSFYGTLSIVGSIASLLGILLYRKYFSNWSWR 285 (433)
T ss_pred EEEEeccccccccCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHH
Confidence 112223345 7887777777666677777766666555444433
No 193
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=99.17 E-value=1.1e-10 Score=103.67 Aligned_cols=132 Identities=14% Similarity=0.096 Sum_probs=99.2
Q ss_pred HHHHHHHhhhhhhhhHhhHhcCchHHHHHHHHHHHHHHHHHHhhh-HH--HHHHHHHHHHHhhcccchHhHHHHHHhcCC
Q 014481 157 SFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPLLAG-FM--PGLVLSRVLVGIGEGVSPSAATDLIARSIP 233 (423)
Q Consensus 157 ~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~~-~~--~~~~~~~~l~G~~~~~~~~~~~~~i~~~~~ 233 (423)
+..+.-+-|.++.+++.||+|||+++..+++++++..++.....+ |. .+++.+|++. ++.+.+.+.|..|.+|
T Consensus 389 itslaefPGlLIt~~iverlGRKkTMal~l~~f~iflfll~~c~~rn~~tvllf~arafi----sg~fqvaYvYtPEVyP 464 (528)
T KOG0253|consen 389 ITSLAEFPGLLITGVIVERLGRKKTMALSLILFGIFLFLLTTCKTRNAYTVLLFTARAFI----SGAFQVAYVYTPEVYP 464 (528)
T ss_pred HHHHhhCCchhHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHH----hchheEEEEecCcccc
Confidence 345666788999999999999999999999999988876633322 21 1334445444 4445666789999999
Q ss_pred CCchhhHHHHHHhhhhhHHHHHHhhHHHhhhccCchHHHHHHHHHHHHHHHHHHhhccCCc
Q 014481 234 LEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAWFSGFKILQEGET 294 (423)
Q Consensus 234 ~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (423)
..-|+.+.|....+..+|+++.|+++ +.....-..+..+.+.+.++..++..++|-+++
T Consensus 465 TavRatgvGtcSsmaRIggI~~p~iA--~~~e~s~sl~i~vy~~~~ilagIavcffPiEtk 523 (528)
T KOG0253|consen 465 TAVRATGVGTCSSMARIGGIFSPVIA--MRAELSTSLPIFVYGALFILAGIAVCFFPIETK 523 (528)
T ss_pred hhhhhcchhhhhhHHhhhhhhhhHHH--HHhccceeehHHHHHHHHHHHHHHheeeeeccC
Confidence 99999999999999999999999999 333334455666777777777777777776544
No 194
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=99.17 E-value=6.9e-10 Score=105.03 Aligned_cols=139 Identities=20% Similarity=0.302 Sum_probs=101.5
Q ss_pred hhhhhHHH-hhhhhCCCcchhhHHHHHHHHHHHhhhhhhhhHhhHhcCchHHHHHHHHHHHHHHHHHHhh----hHHHHH
Q 014481 132 NLSVAIIP-MSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPLLA----GFMPGL 206 (423)
Q Consensus 132 ~~~~~~~~-~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~----~~~~~~ 206 (423)
......|. +.+++|.++.+.+++.+...++..++.++.|++.||+|+|+.+.++.++..++.+++.... .....+
T Consensus 224 ~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (385)
T TIGR00710 224 AFFSGAPFVYIDIMGVSPSVFGLLFALNIIAMIFGGFLNGRFIKKWGAKSLLRMGLILFAVSAVLLEITAILGLGSWAMI 303 (385)
T ss_pred HHHHcChHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHH
Confidence 33344455 4557899999999999999999999999999999999999999888777776665543221 233445
Q ss_pred HHHHHHHHhhcccchHhHHHHHHhcCCCCchhhHHHHHHhhhhh-HHHHHHhhHHHhhhccCchHHH
Q 014481 207 VLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSF-GSVAGLLLAPPIIENLGWESVF 272 (423)
Q Consensus 207 ~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~-g~~~g~~~~~~l~~~~gw~~~~ 272 (423)
+...++.|++.+...+.......|..| ++++++.++.+..... |.+.++. .+.+.+..+|...+
T Consensus 304 ~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~g~i~~~~-~~~~~~~~~~~~~~ 368 (385)
T TIGR00710 304 IGPMMFVGIGNSMISSIAMAYALEDFP-HVAGTASALFGTLRLVLGAIVGYL-VSLIHGNTAWPMSL 368 (385)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhccCc-ccchHHHHHHHHHHHHHHHHHHHH-HHhccccChHHHHH
Confidence 556778889888888888888888876 7899999998877655 5555555 44444443444333
No 195
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=99.17 E-value=1.4e-09 Score=101.86 Aligned_cols=169 Identities=15% Similarity=-0.030 Sum_probs=112.5
Q ss_pred HHHHHHHHHHHhhhhhhhhhHHHhhhhhCCCcchhhHHHHHHHHHHHhhhhhhhhHhhHhcC---chHHHH-HHHHHHHH
Q 014481 117 GTTSLAFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGG---RKVLQT-GVLIWSLA 192 (423)
Q Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~---r~~~~~-~~~~~~~~ 192 (423)
..+.+.+++.......+...+|.+.++.|.+.. .+...++..+...++ .++++||..| |+.... ..++.++.
T Consensus 195 ~~~~~~~~~~~~~~~~~~~wlp~~L~~~g~s~~-~~~~~~l~~~~g~~g---~~~~~d~~~r~~~r~~~~~~~~~~~a~~ 270 (368)
T TIGR00903 195 WIIGAILGFGVALFDNLAIWLEAALRPAGLEDI-AGDAVALAILAGLIG---VAVIPDRVARAGLRSIYIRAAALLIAAF 270 (368)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCChH-HHHHHHHHHHHHHHH---HHHhhHHhhhhhhHHHHHHHHHHHHHHH
Confidence 344444555555555666778887777787754 555555555554444 4677777654 343332 33333333
Q ss_pred HHHHHHhhhHHHHHHHHHHHHHhhcccchHhHHHHHHhcCCCCchhhHHHHHHhhhhhHHHHHHhhHHHhhhccCchHHH
Q 014481 193 TALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVF 272 (423)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~~ 272 (423)
..+. ....+....+++-.+.|++.....+...++.+|.+|++.|++++|+.+....+|++++|++.+.+.. |.+..|
T Consensus 271 ~~~~-~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~rgt~~G~~~~~g~~~~~~~~~~~~~~~~--~~~~~f 347 (368)
T TIGR00903 271 FLAL-AFELNRLALFAFIGIAGLLMLPAYAIIMDWIGKFCDKELHGKAAGAIGFTSRAISVALALAAMLFIS--SAEAYF 347 (368)
T ss_pred HHHH-HHccccHHHHHHHHHHHHhhhhhHHHHHHHHHHhcchhhcCcccchhhHHHHHHHHHHHHHHHHHhc--CHHHHH
Confidence 3333 2233333445555667777777778888999999999999999999999999999999999988773 777888
Q ss_pred HHHHHHHHHHHHHHHhhccC
Q 014481 273 YIFGLLGIAWFSGFKILQEG 292 (423)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~ 292 (423)
.+.++..++..+...+++++
T Consensus 348 ~~~~~~~~i~~~~~~~~~~~ 367 (368)
T TIGR00903 348 TFLAILITIAFAIALLLPND 367 (368)
T ss_pred HHHHHHHHHHHHHHHhCCCC
Confidence 88888877766655444443
No 196
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.16 E-value=1e-09 Score=118.71 Aligned_cols=147 Identities=18% Similarity=0.181 Sum_probs=119.2
Q ss_pred hhhhHHH-hhhhhCCCcc-hhhHHHHHHHHHHHhhhhhhhhHhhHhcCchHHHHHHHHHHHHHHHHHHhhhHHHHHHHHH
Q 014481 133 LSVAIIP-MSHRFGWNSS-VAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPLLAGFMPGLVLSR 210 (423)
Q Consensus 133 ~~~~~~~-~~~~~~~s~~-~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 210 (423)
....+|. +.+.+|.+.. ..+++.+...++.+++.+++|++.||+++++.+.++.++.+++.+++. ...+.+.++++.
T Consensus 251 ~~~~~~~~~~~~~g~s~~~~~g~~~~~~~ig~~~g~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 329 (1146)
T PRK08633 251 AQANFPAYAKEVLGLDNTFQVQYLLAASAIGIGIGSLLAGRLSGRHIELGLVPLGALGLALSLFLLP-TAPSLASVLVLF 329 (1146)
T ss_pred HHHhhHHHHHHHhCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhCCceEccchhHHHHHHHHHHHHHH-HhhhHHHHHHHH
Confidence 3334444 5677899998 999999999999999999999999999999999888887777766653 445667777888
Q ss_pred HHHHhhcccchHhHHHHHHhcCCCCchhhHHHHHHhhhhhHHHHHHhhHHHhhhc-cCchHHHHHHHHHHH
Q 014481 211 VLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIEN-LGWESVFYIFGLLGI 280 (423)
Q Consensus 211 ~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~-~gw~~~~~~~~~~~~ 280 (423)
++.|++.+...+...+++.+..|++.||+++|+.+....+|.++++.+++.+... .++...+++.+.+.+
T Consensus 330 ~~~g~~~~~~~~~~~~~~~~~~p~~~rg~~~~~~~~~~~lg~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 400 (1146)
T PRK08633 330 FLFGFSAGLFIVPLNALIQFRAPEKELGKVLAANNFLQNVGMLLFLALTTLFSGLGLSPAGLFYLIALVTL 400 (1146)
T ss_pred HHHHHHHHHhhHHHHHHHhhcCCccchhhhhHHHHHHHHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHH
Confidence 9999999988888999999999999999999999999999998888888776542 345556665555443
No 197
>PRK10133 L-fucose transporter; Provisional
Probab=99.16 E-value=1.2e-09 Score=104.97 Aligned_cols=140 Identities=16% Similarity=0.105 Sum_probs=110.9
Q ss_pred hhhhCCCcchhhHHHHHHHHHHHhhhhhhhhHhhHhcCchHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhhcccc
Q 014481 141 SHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPLLAGFMPGLVLSRVLVGIGEGVS 220 (423)
Q Consensus 141 ~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~ 220 (423)
++.+|.++.+.++....+.++..++.++.|++.||+|+|+++..+.++.+++.++. ...++. ..+...++.|++.+..
T Consensus 287 ~~~~g~s~~~ag~~~~~~~~~~~vG~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~-~~~~~~-~~~~~~~l~glg~~~i 364 (438)
T PRK10133 287 EEIPGMTAGFAANYLTGTMVCFFIGRFTGTWLISRFAPHKVLAAYALIAMALCLIS-AFAGGH-VGLIALTLCSAFMSIQ 364 (438)
T ss_pred hhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHH-HHcCCh-HHHHHHHHHHHHHHHH
Confidence 45689999999999999999999999999999999999999988877766555444 333332 2345667899999999
Q ss_pred hHhHHHHHHhcCCCCchhhHHHHHHhhhhhHHHHHHhhHHHhhhccC-chHHHHHHHHHHHHHHH
Q 014481 221 PSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLG-WESVFYIFGLLGIAWFS 284 (423)
Q Consensus 221 ~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g-w~~~~~~~~~~~~~~~~ 284 (423)
+|...+...+..+ ++.+.+.++... ..+|..++|.+.|.+.+..| -+..|++..+..+..+.
T Consensus 365 ~P~~~s~a~~~~~-~~~~~as~l~~~-~~~g~~~~~~i~G~l~~~~g~~~~~~~v~~~~~~~~~~ 427 (438)
T PRK10133 365 YPTIFSLGIKNLG-QDTKYGSSFIVM-TIIGGGIVTPVMGFVSDAAGNIPTAELIPALCFAVIFI 427 (438)
T ss_pred HHHHHHHHHcccc-hhhccchhHHhH-HhccchHHHHHHHHHHHhccchHHHHHHHHHHHHHHHH
Confidence 9999999999887 456777777764 44788899999999999887 78888766555544433
No 198
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=99.16 E-value=8.6e-09 Score=95.18 Aligned_cols=264 Identities=13% Similarity=0.061 Sum_probs=176.7
Q ss_pred hHHHhhhh-hCCCcchhh-HHHHHHHHHHHhhhhhhhhHhhHhcCchHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHH
Q 014481 136 AIIPMSHR-FGWNSSVAG-LVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPLLAGFMPGLVLSRVLV 213 (423)
Q Consensus 136 ~~~~~~~~-~~~s~~~~~-~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 213 (423)
..|.+.+. .|++..++. -+.-...-.+.+..++...+.|..|.|++++++.+...+...++ ...++...+-+..++.
T Consensus 26 l~~yL~~~~kn~T~~qv~~~i~Pv~tYSyl~~l~~vflltd~l~Ykpviil~~~~~i~t~~ll-l~~~sv~~mq~~q~~y 104 (412)
T PF01770_consen 26 LTPYLTGPDKNFTEEQVNNEIYPVWTYSYLAFLLPVFLLTDYLRYKPVIILQALSYIITWLLL-LFGTSVLAMQLMQFFY 104 (412)
T ss_pred chHHHcCCccCCCHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHH-HHHCcHHHHHHHHHHH
Confidence 34555554 788887764 45555666677788889999999999999999988877766665 6778889999999999
Q ss_pred HhhcccchHhHHHHHHhcCCCCchhhHHHHHHhhhhhHHHHHHhhHHHhhhcc--CchHHHHHHHHHHHHHHHHHHhhcc
Q 014481 214 GIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENL--GWESVFYIFGLLGIAWFSGFKILQE 291 (423)
Q Consensus 214 G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~--gw~~~~~~~~~~~~~~~~~~~~~~~ 291 (423)
|++.+. ..+..+++-...++++-.++.+....+.-+|..++.++|-.+.... +++....+......+.++..+++|.
T Consensus 105 g~~~a~-evay~sYiys~v~~~~yq~vts~~raa~l~g~~~s~~lgQllvs~~~~sy~~L~~isl~~~~~a~~~~~fLP~ 183 (412)
T PF01770_consen 105 GLATAA-EVAYYSYIYSVVDKEHYQKVTSYTRAATLVGRFISSLLGQLLVSFGGVSYFQLNYISLASVSLALLIALFLPM 183 (412)
T ss_pred HHHHHH-HHHHHHHheeecCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 999765 5777888888889899999999999999999999999988877643 3555555555555556666677776
Q ss_pred CCcCcCCCCCcc-------hhhhhhhhhhhhh---HHhhcccc---------CCCcHHHhhhcHHHHHHHHHHHHHHHHH
Q 014481 292 GETSNGATLAPR-------SNYINMKKSLSAS---LEEMGESL---------KDVPWKAIFRSKAVWAMIYAHFCGSWGH 352 (423)
Q Consensus 292 ~~~~~~~~~~~~-------~~~~~~~~~~~~~---~~~~~~~~---------~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 352 (423)
.++..--.+... .+.....+..... .++..... -...+++.+++|.++...+.+.+...++
T Consensus 184 ~~~S~~f~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~y~~~~ll~WSlWWa~atcgy 263 (412)
T PF01770_consen 184 PKRSLFFHRKPPAEQDANESESDKMNESPESSSSTEKSPSTESSSRKSVLRLLWKDFKSCYSNPRLLLWSLWWAFATCGY 263 (412)
T ss_pred CCcccceeccCccccccccccccccccccccccccccCcccccchHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHhHH
Confidence 554211111000 0000000000000 00000000 0123456678899888888888888888
Q ss_pred HHHHhhhhHHHHHh--hCCChhhHHHHHHHHHHHHHHHHHHHHHHhHHhhh
Q 014481 353 YTCLSWLPTYFSEE--LSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIA 401 (423)
Q Consensus 353 ~~~~~~~~~~~~~~--~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~ 401 (423)
+.+.++......+. -+-...--|.+-++..+.+.++.+..|++-.++.+
T Consensus 264 ~qv~nYvQ~LW~~v~~~~~~~vYNG~VeA~~tllgA~~al~~g~v~~~w~~ 314 (412)
T PF01770_consen 264 YQVINYVQSLWDTVPPSDNESVYNGAVEAASTLLGAIAALLAGYVKVNWDR 314 (412)
T ss_pred HHHHHHHHHHHHhcCCCCCCcccchHHHHHHHHHHHHHHHHHhHhhcchHH
Confidence 88888777776654 12333445778888888888888999988554443
No 199
>PF13347 MFS_2: MFS/sugar transport protein
Probab=99.15 E-value=1.3e-09 Score=104.70 Aligned_cols=150 Identities=20% Similarity=0.177 Sum_probs=122.7
Q ss_pred HHHHHHHHHHhhhhhhhhhHHHhhhh-hCCCcchhhHHHHHHHHHHHhhhhhhhhHhhHhcCchHHHHHHHHHHHHHHHH
Q 014481 118 TTSLAFVICNMDKVNLSVAIIPMSHR-FGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALL 196 (423)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~ 196 (423)
.+.+..++..+.........+.+.++ +|.+ ...+.+..+..++..++.+++++++||+|+|+.+..+.++.+++.++.
T Consensus 229 ~l~~~~~~~~~~~~~~~~~~~y~~~~vl~~~-~~~~~~~~~~~~~~~v~~~~~~~l~~r~gk~~~~~~~~~~~~~~~~~~ 307 (428)
T PF13347_consen 229 ILLLAFFLQWLAFALMNTFLPYYFTYVLGNE-GLISIFMLIFFVASIVGSPLWGRLSKRFGKKKVYIIGLLLAALGFLLL 307 (428)
T ss_pred HHHHHHHHHHhhhhhhhhHHHHHHHHHhcCc-hhhHHHHHHHHHHHHHHHHHHHHHHHHccceeehhhhHHHHHHHHHHH
Confidence 44455555556666666666665555 4544 677888889999999999999999999999999999999999988877
Q ss_pred HHhh-hHHHHHHHHHHHHHhhcccchHhHHHHHHhcCCC-------CchhhHHHHHHhhhhhHHHHHHhhHHHhhhccCc
Q 014481 197 PLLA-GFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPL-------EERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGW 268 (423)
Q Consensus 197 ~~~~-~~~~~~~~~~~l~G~~~~~~~~~~~~~i~~~~~~-------~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw 268 (423)
.... ++.+.+++..++.|++.+...+...++++|..+. ++.|..+|.++....+|..+++.+.+.+.+..|+
T Consensus 308 ~~~~~~~~~~~~i~~~l~gi~~~~~~~~~~a~~ad~id~~e~~tg~r~~g~~~s~~~~~~k~~~~la~~i~g~~l~~~Gy 387 (428)
T PF13347_consen 308 FFLGPGSPWLVLILFILAGIGYGAFFVIPWAMLADVIDYDEWKTGRRREGMYFSVNSFFIKIGQGLAGAIVGLLLALVGY 387 (428)
T ss_pred HHHHhhhHHHHHHHHHHhHhhhcccccccccccccchhhHHHhcCCCchHHHHHhhhhhhHHHHHHHHHHHHHHHHHhCc
Confidence 5555 5778899999999999999999999999999863 3458889999999999999999999988776554
No 200
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=99.14 E-value=2.6e-09 Score=101.47 Aligned_cols=170 Identities=15% Similarity=0.085 Sum_probs=112.3
Q ss_pred HHHHHHHHHhhhhhhhhhHHHhhhhhCCCcchhhHHHHHHHHHHHhhhhhhhhHhhHhcCchHHHHHHHHHHHHHHHHH-
Q 014481 119 TSLAFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLP- 197 (423)
Q Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~- 197 (423)
+++.+++.+.....++..+|.+.++ +.+.........+..+...+..+++|+++||+|+|+++.++.++..+......
T Consensus 257 lslly~~tFG~fvg~s~~lp~~~~~-~~~~~~~l~~~~l~~l~~~l~rplgG~LADRiG~~~vl~~~~i~~~i~~~~~~l 335 (462)
T PRK15034 257 LSLLYLATFGSFIGFSAGFAMLAKT-QFPDVNILRLAFFGPFIGAIARSVGGAISDKFGGVRVTLINFIFMAIFSALLFL 335 (462)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH-HcChHHHHHHHHHHHHHHHHHHHhhHHHHHhcCchHHHHHHHHHHHHHHHHHHH
Confidence 3334444444444455556654433 22333333334455677888899999999999999999998877666653321
Q ss_pred Hhh----hHHHHHHHHHHHHHhhcccchHhHHHHHHhcCCC---------------------CchhhHHHHHHhhhhhHH
Q 014481 198 LLA----GFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPL---------------------EERSRAVSFVFGGLSFGS 252 (423)
Q Consensus 198 ~~~----~~~~~~~~~~~l~G~~~~~~~~~~~~~i~~~~~~---------------------~~r~~~~~~~~~~~~~g~ 252 (423)
... .+++.+.+..+...++.|........++.+++|+ ++-|.+.|+......+|+
T Consensus 336 ~lp~~~~~~~~~~~~~~~~l~~~~G~gngsvfk~ip~~f~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~G~v~a~G~~Gg 415 (462)
T PRK15034 336 TLPGTGSGNFIAFYAVFMGLFLTAGLGSGSTFQMIAVIFRQITIYRVKMKGGSDEQAQREAVTETAAALGFISAIGAVGG 415 (462)
T ss_pred HhccccccHHHHHHHHHHHHHHHhcccchHHHHhhHHHHhhhhhhcccccccchhHHhhHHHHHHHHHHHHHHHHHHccc
Confidence 222 2445555555555555555566677788888874 156788999999999999
Q ss_pred HHHHhhHHHhhhccC-chHHHHHHHHHHHHHHHHHHhh
Q 014481 253 VAGLLLAPPIIENLG-WESVFYIFGLLGIAWFSGFKIL 289 (423)
Q Consensus 253 ~~g~~~~~~l~~~~g-w~~~~~~~~~~~~~~~~~~~~~ 289 (423)
.+-|.+.+...+..| +...|++..+..++++++.+..
T Consensus 416 f~~p~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~w~~ 453 (462)
T PRK15034 416 FFIPQAFGMSLNMTGSPVGAMKVFLIFYIVCVLLTWLV 453 (462)
T ss_pred chhhHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHH
Confidence 999988777776644 8888888888877765555443
No 201
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=99.13 E-value=3.2e-09 Score=100.76 Aligned_cols=148 Identities=16% Similarity=0.077 Sum_probs=113.8
Q ss_pred HhhhhhCCCcchhhHHHHHHHHHHHhhhhhhhhHhhHhcCchHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhhcc
Q 014481 139 PMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPLLAGFMPGLVLSRVLVGIGEG 218 (423)
Q Consensus 139 ~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~ 218 (423)
.+.+.+|.++.+.|++.+...++..+++++.+++.||+++|+.+..+.. .++...+. ...++++..+++.++.|++.+
T Consensus 231 ~~~~~lg~s~~~~G~~~~~~~~g~i~g~~~~~~l~~~~~~~~~~~~g~~-~~~~~~~~-~~~~~~~~~~~~~~~~G~~~g 308 (393)
T PRK11195 231 WAPVALGITLNQPAYLQAVVAIGIAVGAGAAARLVTLETVLRVLPAGIL-MGLVVLLM-ALQHSLLPAYPLLILIGALGG 308 (393)
T ss_pred HHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchHHHHHH-HHHHHHHH-HHHhHHHHHHHHHHHHHHhhh
Confidence 3556789999999999999999999999999999999999988877753 34443333 335555666677788999988
Q ss_pred cchHhHHHHHHhcCCCCc-hhhHHHHHHhhhhhHHHHHHhhHHHhhhccCchHHHHHHHHHHHHHHHHHHhh
Q 014481 219 VSPSAATDLIARSIPLEE-RSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAWFSGFKIL 289 (423)
Q Consensus 219 ~~~~~~~~~i~~~~~~~~-r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~~~~~~~~~~~~~~~~~~~ 289 (423)
...+...+.+.+..|++. +|++.++.+...++|..++..+.+.+ ...|-+..+++.+...++.+.....+
T Consensus 309 ~~~~~~~~~~q~~~~~~~~~g~~~a~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 379 (393)
T PRK11195 309 FFVVPMNALLQHRGHVLVGAGHSIAVQNFNENLAMLLMLGLYSLL-VKLGVPVVAVIVGFGLLVALAMALLW 379 (393)
T ss_pred hhhhhHHHHHHhhCcccccchhHHHHHhHHHHHHHHHHHHHHHHH-HHcCCCHHHHHHHHHHHHHHHHHHHH
Confidence 888888888888766544 79999999999999999999999865 56677777666555555444443333
No 202
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=99.12 E-value=1e-09 Score=118.37 Aligned_cols=162 Identities=12% Similarity=0.035 Sum_probs=123.3
Q ss_pred HHHHHHHHhhhhhhhhhHHHh-hhhhCCCcchhhHHHHHHHHHHHhhhhhhhhHhhHhcCchHHHHHHHHHHHHHHHHHH
Q 014481 120 SLAFVICNMDKVNLSVAIIPM-SHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPL 198 (423)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~ 198 (423)
.+..++..+....+...+|.+ .+.+|.+..+.|++.+.+.++.+++.++.|+++|+.++++.+.++.++.+++.+.+..
T Consensus 231 ~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~l~~ 310 (1140)
T PRK06814 231 ILGISWFWLVGAVVLSQLPLLAKETLGGDENVATLFLAVFSVGVAVGSFLASKLSEGRITLLYVPIGALLMGLFGLDLAF 310 (1140)
T ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHHHHhCCceeeeeehHHHHHHHHHHHHHHh
Confidence 333333333334444455654 4568999999999999999999999999999999888877776666665555443322
Q ss_pred h-------------------hhHHHHHHHHHHHHHhhcccchHhHHHHHHhcCCCCchhhHHHHHHhhhhhHHHHHHhhH
Q 014481 199 L-------------------AGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLA 259 (423)
Q Consensus 199 ~-------------------~~~~~~~~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~ 259 (423)
. ..+.+.++++.++.|++.+...+...+++.+.+|++.||+++|+.+....+|..+|++++
T Consensus 311 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~G~v~g~~~~~~~~~~~ig~~~~ 390 (1140)
T PRK06814 311 ASSSVPAEPAQLKSILVFLSKRHGWRILIDLFGLAAAGGLYIVPLFAALQAWANPAHRARVIAANNVLNAAFMVAGTIIL 390 (1140)
T ss_pred cccccccccccccchhhhhcccccHHHHHHHHHHHHHHHHhHHHHHHHHHhhCCcccceeeeHHHHHHHHHHHHHHHHHH
Confidence 1 145567778888999999999999999999999999999999999999999999999999
Q ss_pred HHhhh-ccCchHHHHHHHHHHHH
Q 014481 260 PPIIE-NLGWESVFYIFGLLGIA 281 (423)
Q Consensus 260 ~~l~~-~~gw~~~~~~~~~~~~~ 281 (423)
+.+.+ ..++...+++.+++.++
T Consensus 391 g~l~~~~~~~~~~~~~~~~~~~~ 413 (1140)
T PRK06814 391 ALLQALGFSIPWIILFIALANLI 413 (1140)
T ss_pred HHHHHhccCHHHHHHHHHHHHHH
Confidence 99874 44667666665554433
No 203
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=99.12 E-value=9.4e-10 Score=107.68 Aligned_cols=136 Identities=17% Similarity=0.140 Sum_probs=112.8
Q ss_pred hhhhhhhHHH-hhhhhCCCcchhhHHHHHHHHHHHhhhhhhhhHhhHhcCchHHHHHHHHHHHHHHHHHHhh--hHHHHH
Q 014481 130 KVNLSVAIIP-MSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPLLA--GFMPGL 206 (423)
Q Consensus 130 ~~~~~~~~~~-~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~--~~~~~~ 206 (423)
......+.|. ++..+|.++.+.|+......++..++.++.|++.||+|+|+.+..+.++.+++.+++.... ++.+..
T Consensus 275 ~~~~~~~~~~~lq~v~g~s~~~ag~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~ 354 (495)
T PRK14995 275 LVGFELLMAQELQFVHGLSPLEAGMFMLPVMVASGFSGPIAGILVSRLGLRLVATGGMALSALSFYGLAMTDFSTQQWQA 354 (495)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHHhcCCCchHHH
Confidence 3334445555 5566899999999999999999999999999999999999999888888777665543322 344556
Q ss_pred HHHHHHHHhhcccchHhHHHHHHhcCCCCchhhHHHHHHhhhhhHHHHHHhhHHHhhhc
Q 014481 207 VLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIEN 265 (423)
Q Consensus 207 ~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~ 265 (423)
+...++.|+|.+...+.....+.+..|+++++.+.++++....+|..+|+.+.+.+.+.
T Consensus 355 ~~~~~l~G~g~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lG~~~G~ai~g~i~~~ 413 (495)
T PRK14995 355 WGLMALLGFSAASALLASTSAIMAAAPPEKAAAAGAIETMAYELGAGLGIAIFGLLLSR 413 (495)
T ss_pred HHHHHHHHHhHHHHHHHHHHHHHhcCCHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 67788999999998888888888999999999999999999999999999999988753
No 204
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=99.11 E-value=3.3e-09 Score=100.78 Aligned_cols=135 Identities=16% Similarity=0.135 Sum_probs=91.5
Q ss_pred hhhhhCCCcchhhHHHHHHHHHHHhhhhhhhhHhhHhcCchHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhhccc
Q 014481 140 MSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPLLAGFMPGLVLSRVLVGIGEGV 219 (423)
Q Consensus 140 ~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~ 219 (423)
+.+++|.+..+.+.+.+...++..++.++.+++.||+|+|+.+.++.++..++.++.. ..++.+..+....+.+.|.+.
T Consensus 230 ~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~g~~~ 308 (392)
T PRK10473 230 LMEQMGFSRGEYAIIMALTAGVSMTVSFSTPFALGIFKPRTLMLTSQVLFLAAGITLA-LSPSHAVSLFGITLICAGFSV 308 (392)
T ss_pred HHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHH
Confidence 4567899999999999999999999999999999999999999999888777776653 333333333434444444333
Q ss_pred chHhHHHHHHhcCCCCchhhHHHHHHhhhhhHHHHHHhhHHHhhhccCchHHHHHHHHHHH
Q 014481 220 SPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGI 280 (423)
Q Consensus 220 ~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~~~~~~~~~~ 280 (423)
..+. ....+..|.++|+ +.......++..+|+.+++++.+..|+.....+.+++.+
T Consensus 309 ~~~~--~~~~~~~~~~~~~---g~~~~~~~~~~~~g~~~~~~l~~~~g~~~~~~~~~~~~~ 364 (392)
T PRK10473 309 GFGV--AMSQALGPFSLRA---GVASSTLGIAQVCGSSLWIWLAAVLGISAWNMLIGILIA 364 (392)
T ss_pred HhHH--HHHHHhccCcccc---cHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHH
Confidence 3333 2333444544443 444445567777888888888887787765555555443
No 205
>PRK09848 glucuronide transporter; Provisional
Probab=99.11 E-value=1.1e-09 Score=106.05 Aligned_cols=149 Identities=14% Similarity=0.098 Sum_probs=109.7
Q ss_pred HHHHHHHHhhhhhhhhhHHHh-hhhhCCCcchhhHHHHHHHHHHHhhhhhhhhHhhHhcCchHHHHHHHHHHHHHHHHHH
Q 014481 120 SLAFVICNMDKVNLSVAIIPM-SHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPL 198 (423)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~ 198 (423)
.+..++............+.+ .+.+|.+....++......++..++.++++++.||+|+|+.+.++.++.+++.++...
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~l~~r~g~~~~~~~g~~~~~i~~~~~~~ 313 (448)
T PRK09848 234 CIGALCVLISTFAVSASSLFYVRYVLNDTGLFTVLVLVQNLVGTVASAPLVPGMVARIGKKNTFLIGALLGTCGYLLFFW 313 (448)
T ss_pred HHHHHHHHHHHHHHhhhheeeEeeecCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHH
Confidence 333333333334444445543 4456766555555455556778889999999999999999999998887777665533
Q ss_pred hh-hHHHHHHHHHHHHHhhcccchHhHHHHHHhcCCCC-------chhhHHHHHHhhhhhHHHHHHhhHHHhhhccCc
Q 014481 199 LA-GFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLE-------ERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGW 268 (423)
Q Consensus 199 ~~-~~~~~~~~~~~l~G~~~~~~~~~~~~~i~~~~~~~-------~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw 268 (423)
.. ++++.+++..++.|+|.+...+...++.+|..+.+ ++|..+|+++....+|..+|+.+.+.+.+..|+
T Consensus 314 ~~~~~~~~~~~~~~l~g~G~~~~~~~~~al~~~~~~~~~~~~g~r~~G~~~~~~~~~~klg~aig~~i~g~~l~~~G~ 391 (448)
T PRK09848 314 VSVWSLPVALVALAIASIGQGVTMTVMWALEADTVEYGEYLTGVRIEGLTYSLFSFTRKCGQAIGGSIPAFILGLSGY 391 (448)
T ss_pred cCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHhhCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 22 34566667778899999999999999999988654 358999999999999999999999998776555
No 206
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=99.10 E-value=6.4e-10 Score=103.74 Aligned_cols=135 Identities=27% Similarity=0.298 Sum_probs=109.4
Q ss_pred HHHHHHhhhhhhhhhHHHh-hhhhCCC-cchhhHHHHHHHHHHHhhhhhhhhHhhHhcCchHHHHHHHHHHHHHHHHHHh
Q 014481 122 AFVICNMDKVNLSVAIIPM-SHRFGWN-SSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPLL 199 (423)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~-~~~~~~s-~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~~ 199 (423)
..+...+.........|.+ .+++|.+ ..+.+++.++..+...++.++.|++.||+|+|+...+......+..+.+...
T Consensus 214 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (352)
T PF07690_consen 214 AFFLFFFVFSGFSFFLPLYLQEVLGFSGPSQAGLLFSIFGIVGIIGSLLAGRLSDRFGRRRRLLIAILLLILGALGLLLL 293 (352)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCHHHHCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHCCS
T ss_pred hhhHHHHHHHHhhcccchhhhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHH
Confidence 3333334444566677775 8889999 7899999999999999999999999999999888877777666665554322
Q ss_pred h--hHHHHHHHHHHHHHhhcccchHhHHHHHHhcCCCCchhhHHHHHHhhhhhHHHHHH
Q 014481 200 A--GFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGL 256 (423)
Q Consensus 200 ~--~~~~~~~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~ 256 (423)
. ++....++..++.|++.+...+....++.+.+|+++||++.|+.+...++|..+||
T Consensus 294 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~igP 352 (352)
T PF07690_consen 294 PFSSSPVWLIIALFLIGFGFGIVFPILFSLIQELVPPEYRGTAFGLFNSIGSLGGIIGP 352 (352)
T ss_dssp HHHCHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCHTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHCC
Confidence 2 23456666788899999999999999999999999999999999999999999987
No 207
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=99.10 E-value=8.2e-10 Score=108.00 Aligned_cols=140 Identities=16% Similarity=0.197 Sum_probs=113.9
Q ss_pred HhhhhhhhhhHHHh-hhhhCCCcchhhHHHHHHHHHHHhhhhhhhhHhhHhcCchHHHHHHHHHHHHHHHHHH-h--hhH
Q 014481 127 NMDKVNLSVAIIPM-SHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPL-L--AGF 202 (423)
Q Consensus 127 ~~~~~~~~~~~~~~-~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~-~--~~~ 202 (423)
.+........+|.+ .+.+|.++.+.++......++..++.++.|++.||+|||+.+.++.++.+++..+... . ..+
T Consensus 268 ~~~~~~~~~~~p~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 347 (485)
T TIGR00711 268 GLGLYGSFYLLPLYLQQVLGYTALQAGLHILPVGLAPMLSSPIAGRMGDKIDPRKLVTIGLILYAVGFYWRAFTFTPDTP 347 (485)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcHHHHHHHHHHHHHHHHHHhccCCCCCC
Confidence 33333444456664 4558999999999999999999999999999999999999999998887777766531 1 233
Q ss_pred HHHHHHHHHHHHhhcccchHhHHHHHHhcCCCCchhhHHHHHHhhhhhHHHHHHhhHHHhhhcc
Q 014481 203 MPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENL 266 (423)
Q Consensus 203 ~~~~~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~ 266 (423)
++.++...++.|++.+...+.......+..|+++|+++.|+.+....+|..+|+.+.+.+.++.
T Consensus 348 ~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~i~g~~~~~~ 411 (485)
T TIGR00711 348 FLAIALPQFIRGFGMGCFFMPLTTIALSGLPPHKIARGSSLSNFTRQLGGSIGTALITTILTNR 411 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4566667888999998888777788888889999999999999999999999999999988753
No 208
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=99.08 E-value=2.2e-07 Score=88.46 Aligned_cols=275 Identities=10% Similarity=-0.025 Sum_probs=166.2
Q ss_pred HHHHHHHHHHHHHHhhhhhhhhhHHHhhhhhCC-----CcchhhHHHHHHHHHHHhh-hhhhhhHhhHhcCchHHHHHHH
Q 014481 114 KLIGTTSLAFVICNMDKVNLSVAIIPMSHRFGW-----NSSVAGLVQSSFFWGYALS-QLPGGWLAKIFGGRKVLQTGVL 187 (423)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----s~~~~~~~~~~~~~~~~~~-~~~~g~l~dr~G~r~~~~~~~~ 187 (423)
+.++.+.+..++..+..+.. -.+.+.+.+ +...+.++.+...+...+. .++.+++++|++|++.+-+...
T Consensus 7 ~k~~~~~l~fF~il~~Y~iL----R~lKD~lvv~~~~~gae~i~fLk~~~~lp~~~~~~~ly~~l~~~~~~~~lf~~~~~ 82 (472)
T TIGR00769 7 KKFLPLFLMFFCILFNYTIL----RDTKDTLVVTAKGSGAEIIPFLKTWVVVPMAVIFMLIYTKLSNILSKEALFYTVIS 82 (472)
T ss_pred HHHHHHHHHHHHHHHHHHHH----HhhhhheeecccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHhHHHHHH
Confidence 44445555555554444443 335555544 3467889999888877777 8999999999999999888766
Q ss_pred HHHHHHHHHHHh----hh--------------------------HHHHHHHHHHHHHhhcccchH-hHHHHHHhcCCCCc
Q 014481 188 IWSLATALLPLL----AG--------------------------FMPGLVLSRVLVGIGEGVSPS-AATDLIARSIPLEE 236 (423)
Q Consensus 188 ~~~~~~~~~~~~----~~--------------------------~~~~~~~~~~l~G~~~~~~~~-~~~~~i~~~~~~~~ 236 (423)
.+.....++++. .+ +.|...+..+...+-...... ...++++|.++.++
T Consensus 83 ~F~~~f~lF~~vl~p~~~~~~p~~~~~~~~~~~~~~~~~~i~~~~~W~~~~FYv~~elw~~~vvS~lFW~fandi~t~~q 162 (472)
T TIGR00769 83 PFLGFFALFAFVIYPLSDLLHPTALADKLLSLLPPGFMGFIAILRIWSFALFYVMAELWGSVVLSLLFWGFANQITTIDE 162 (472)
T ss_pred HHHHHHHHHHHHHhcchhhcCCcHHHHHHHhhcchhhHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHH
Confidence 666555554333 01 123333444445555455555 77899999999999
Q ss_pred hhhHHHHHHhhhhhHHHHHHhhHHHhhhc--------cCch----HHHHHHHHHHHHHHHHHHhhccCCcCcCCCCCcch
Q 014481 237 RSRAVSFVFGGLSFGSVAGLLLAPPIIEN--------LGWE----SVFYIFGLLGIAWFSGFKILQEGETSNGATLAPRS 304 (423)
Q Consensus 237 r~~~~~~~~~~~~~g~~~g~~~~~~l~~~--------~gw~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (423)
-.|.++++..+.++|.++++.+..++.+. ..|. ..+.+.++..++...+...+.+....++.. .+.+
T Consensus 163 akRfy~l~~~ganlg~i~sg~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~~~~~~~~~~~l~~~~~~~~~~-~~~~ 241 (472)
T TIGR00769 163 AKRFYALFGLGANVALIFSGRTIKYFSKLRASLGPGVDGWHVSLKNLMVIVICSGLAIILLYWWVNRNVLTDPRS-YNPA 241 (472)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccChHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCccc-cchh
Confidence 99999999999999999999998887731 1242 223333333334344444443322111100 0000
Q ss_pred hhhhhhhhhhhhHHhhccccCCCcHHHhhhcHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHhhCCChhh---HHHHHHHH
Q 014481 305 NYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTE---AAWVSILP 381 (423)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~---~~~~~~~~ 381 (423)
+. ..++..+..-...++.++++|.++.+++...++..+.+.+....-..+.+.+--+... .|.+....
T Consensus 242 ~~---------~~k~k~k~~~~es~k~i~~S~yL~~ia~~vi~y~~~~nlve~~~k~~v~~~~p~~~~~~~f~g~~~~~~ 312 (472)
T TIGR00769 242 LK---------EKKVKPKMSTMESLKFLVSSPYILDLALLVIAYGISINLVEVTWKSKLKAQYPSPNEYSAFMGDFSTWT 312 (472)
T ss_pred hc---------cccCCCCCCHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
Confidence 00 0000000011124677899999998888888887777777665555555544322222 23445555
Q ss_pred HHHHHHHHHHHHHHhHHhhhc
Q 014481 382 PLASVLVTSIAAQFADNLIAT 402 (423)
Q Consensus 382 ~~~~~~~~~~~g~l~dr~~~r 402 (423)
++..++..++.+++.+|+|-+
T Consensus 313 gi~tl~~~l~~~~l~~~~Gw~ 333 (472)
T TIGR00769 313 GVVSVTMMLLSGNVIRKYGWL 333 (472)
T ss_pred HHHHHHHHHHHHHHHHHhhHH
Confidence 666666677778999998865
No 209
>TIGR00901 2A0125 AmpG-related permease.
Probab=99.08 E-value=2.3e-09 Score=100.40 Aligned_cols=124 Identities=15% Similarity=0.103 Sum_probs=99.4
Q ss_pred HHhhhhhhhhhHHHhhhhhCCCcchhhHHHHHHH-HHHHhhhhhhhhHhhHhcCchHHHHHHHHHHHHHHHHHHhh----
Q 014481 126 CNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFF-WGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPLLA---- 200 (423)
Q Consensus 126 ~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~-~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~---- 200 (423)
............|.+.+++|.+..+.+.+.++.. ++..++.+++|++.||+|+|+.++++.++.++...+.....
T Consensus 221 ~~~~~~~~~~~~~~~l~~~g~~~~~~g~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~ 300 (356)
T TIGR00901 221 YKLGDSAATVLTTLFLLDMGFSKEEIALVAKINGLLGAILGGLIGGIIMQPLNILYALLLFGIVQALTNAGFVWLASNGH 300 (356)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCHHHHHHHhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHhcCc
Confidence 3344445555666666669999999998888766 67789999999999999999999988888777665543332
Q ss_pred ------hHHHHHHHHHHHHHhhcccchHhHHHHHHhcCCCCchhhHHHHHHhhhh
Q 014481 201 ------GFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLS 249 (423)
Q Consensus 201 ------~~~~~~~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~ 249 (423)
++.+.++.+.++.+++.+...+...+++.+.+|+++||+.+|+++...+
T Consensus 301 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~ 355 (356)
T TIGR00901 301 HDGITFPHLLMLFLTITLEAVTGGLGTVAFVAFLSKLSNPKFGATQMALLSSLSA 355 (356)
T ss_pred ccccccchHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHh
Confidence 3446677788899999999999999999999999999999999887654
No 210
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=99.07 E-value=5.3e-09 Score=98.74 Aligned_cols=129 Identities=16% Similarity=0.058 Sum_probs=89.0
Q ss_pred hhhhhHHH-hhhhhCCCcchhhHHHHHHHHHHHhhhhhhhhHhhHhcCchHHHHHHHHHHHHHHHHHH---hhhHHHHHH
Q 014481 132 NLSVAIIP-MSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPL---LAGFMPGLV 207 (423)
Q Consensus 132 ~~~~~~~~-~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~---~~~~~~~~~ 207 (423)
......|. +.+.+|.++.+.+++.+...++..++.++.|++.||+|+|+.+.++.++..+..+.... ...+.+.+.
T Consensus 212 ~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (377)
T PRK11102 212 SFLTAGPFVYIELNGVSPQNFGYYFALNIVFLFVMTIINSRFVRRVGALNMLRFGLWIQFIMGIWLVVSALLDLGFWALV 291 (377)
T ss_pred HHHHcCHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHH
Confidence 33334444 55668999999999999999999999999999999999999998887654443322211 122334444
Q ss_pred HHHHHHHhhcccchHhHHHHHHhcCCCCchhhHHHHHHhh-hhhHHHHHHhhHHH
Q 014481 208 LSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGG-LSFGSVAGLLLAPP 261 (423)
Q Consensus 208 ~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~-~~~g~~~g~~~~~~ 261 (423)
++..+.+.+.+...+.....+.+..| ++++++.++.+.. ..+|..+|+++++.
T Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~g~~~g~~~~~~ 345 (377)
T PRK11102 292 VGVAAFVGCVSMISSNAMAVILDEFP-HMAGTASSLAGTLRFGIGAIVGALLSLA 345 (377)
T ss_pred HHHHHHHHHHHHhhHHHHHHHhcccc-ccchHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 44444444445555556667777766 8899999986554 55777777776543
No 211
>PRK10429 melibiose:sodium symporter; Provisional
Probab=99.06 E-value=2.2e-09 Score=104.45 Aligned_cols=150 Identities=13% Similarity=0.008 Sum_probs=110.1
Q ss_pred HHHHHHHHHhhhhhhhhhHHHhhhhhCCCcchhhHHHHHHHHHHHhhhhhhhhHhhHhcCchHHHHHHHHHHHHHHHHHH
Q 014481 119 TSLAFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPL 198 (423)
Q Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~ 198 (423)
+.+..++............+.+.++...+....+++.++..++.+++.++++++.||+|+|+.+.++.++..++.+....
T Consensus 236 ll~~~~~~~~~~~~~~~~~~y~~~y~~~~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~gkk~~~~~~~~~~~~~~~~~~~ 315 (473)
T PRK10429 236 LLGMALAYNIASNIINGFAIYYFTYVIGDADLFPYYLSYAGAANLVTLILFPRLVKSLSRRILWAGASIFPVLSCGVLLL 315 (473)
T ss_pred HHHHHHHHHHHHHHHhhheeeEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHH
Confidence 33334333444445555555555554445666777777777889999999999999999999999888776655544322
Q ss_pred ----hhhHHHHHHHHHHHHHhhcccchHhHHHHHHhcCC-------CCchhhHHHHHHhhhhhHHHHHHhhHHHhhhccC
Q 014481 199 ----LAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIP-------LEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLG 267 (423)
Q Consensus 199 ----~~~~~~~~~~~~~l~G~~~~~~~~~~~~~i~~~~~-------~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g 267 (423)
..++.+.+++..++.|++.+...+...++++|..+ .+..|..+|......-+|..+|+.+.|++.+..|
T Consensus 316 ~~~~~~~~~~~~~i~~~l~g~~~~~~~~~~~am~ad~id~~e~~tG~R~~G~~~s~~~~~~K~~~al~~~i~g~~l~~~G 395 (473)
T PRK10429 316 MGLAAPHNALLIVIAGILLNIGTALFWVLQVIMVADTVDYGEYKLGIRCESIAYSVQTMVVKGGSAFAAFFIGVVLGLIG 395 (473)
T ss_pred HhccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhHhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 13445666777788899999888999999999965 3345668899999999999999999999887655
Q ss_pred c
Q 014481 268 W 268 (423)
Q Consensus 268 w 268 (423)
+
T Consensus 396 y 396 (473)
T PRK10429 396 Y 396 (473)
T ss_pred C
Confidence 5
No 212
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=99.03 E-value=6.1e-09 Score=95.49 Aligned_cols=282 Identities=11% Similarity=0.050 Sum_probs=161.6
Q ss_pred HHHHHHHHHHHHhhhhhhhhhHHHhhhhhCCCcchhhHHHHHHHHHHHhhhhhhhhHhhH----hcCchHHHHHHHHH-H
Q 014481 116 IGTTSLAFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKI----FGGRKVLQTGVLIW-S 190 (423)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr----~G~r~~~~~~~~~~-~ 190 (423)
++.+....+...+.+..-..+.+++..++|++....+.+-.+..+...+.+|+.|..+|| |||||.++....+. +
T Consensus 34 li~v~~ia~Gvqf~wA~elsy~tPyl~~lGvphk~~S~iw~~gPi~G~~vQP~vG~~SDrc~sr~GRRRPfI~~~s~~i~ 113 (498)
T KOG0637|consen 34 LISVASIAAGVQFGWALELSYLTPYLQSLGVPHKWSSIIWLCGPLSGLLVQPLVGSASDRCTSRYGRRRPFILAGSLLIA 113 (498)
T ss_pred HHHHHHHHHHHHHHHHHHhccccHHHHHcCCCcccccccccccccccceecccccccccccccccccccchHHHhhHHHH
Confidence 334444444455666667777888888999999999999999999999999999999995 89999888765443 3
Q ss_pred HHHHHHHHhhh----------------HHHHHHHHHHHHHhhcccchHhHHHHHHhcCCCCchhh-HHHHHHhhhhhHHH
Q 014481 191 LATALLPLLAG----------------FMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSR-AVSFVFGGLSFGSV 253 (423)
Q Consensus 191 ~~~~~~~~~~~----------------~~~~~~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~-~~~~~~~~~~~g~~ 253 (423)
++.++....++ ....+++..-+.-++.-.....+-+++.|....+++.+ +++.+..+..+|++
T Consensus 114 ~~l~Lig~aaDig~~lgd~~~~~~~~rai~~~~lg~~LLD~A~n~~qgp~ra~L~Dl~~~d~~~~~Ans~f~~f~avGnv 193 (498)
T KOG0637|consen 114 VSLFLIGYAADIGLLLGDNERKPVKPRAIVLFILGFWLLDVANNTLQGPCRALLADLARGDAKKTRANSVFSFFMAVGNV 193 (498)
T ss_pred HHHhhhhhHhhhhHHhcCCcccccchHHHHHHHHHhHHHHhhhhhhhhhHHHHHHHhccChhhhhccchhHHHHHHhcce
Confidence 44444432221 11234444445555666777888999999997666666 99999999999999
Q ss_pred HHHhhHHHhhhcc--Cc---hHHHHHHHHHHHHHHHHHHh-hccCCc--CcC--CCCCcchhhhhhhhhhhhhHHhhccc
Q 014481 254 AGLLLAPPIIENL--GW---ESVFYIFGLLGIAWFSGFKI-LQEGET--SNG--ATLAPRSNYINMKKSLSASLEEMGES 323 (423)
Q Consensus 254 ~g~~~~~~l~~~~--gw---~~~~~~~~~~~~~~~~~~~~-~~~~~~--~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (423)
+|..+++++.-+. .. ...+..++.+-...+.-.-+ ..++.. ... ++...+....+.+.......++...
T Consensus 194 LGY~~g~y~~~~~~~~Ft~~~~~~~~C~~~~~~~~~~v~L~~i~~~~~l~~~~~~~~s~~~~~~~~~~~~~~~~~e~fG- 272 (498)
T KOG0637|consen 194 LGYALGSYLGLYKIFPFTLTTACDLYCANLKLCFFLEVTLLLIETSESLWYPQEKPLSPKGTTARSKSSKLPFLLEIFG- 272 (498)
T ss_pred eeeecccccCceEEeehHHHHHHHHHHHHHHHHHHHhhhhhheecccccccccccCCCCCcccccccccCcchHHHHhc-
Confidence 9998887442211 00 11111111111111111111 111100 000 0000000000000000000001000
Q ss_pred cCCCcHHHhhhcHHHHHHHHHHHHHHHHHHHHHhhhhHHHHH-hhCCChhh----------------HHHHHHHHHHHHH
Q 014481 324 LKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLSWLPTYFSE-ELSLNLTE----------------AAWVSILPPLASV 386 (423)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-~~g~s~~~----------------~~~~~~~~~~~~~ 386 (423)
. -....+..+.+++...+.+.+.+.+..+...++-+ .|+-++.. -.+=+.+..+...
T Consensus 273 ----~--~~~mpr~m~~L~i~~lltW~a~f~f~LF~TDfmG~~vy~GDp~a~~~S~a~~~Y~~GV~~G~~GL~ins~~lg 346 (498)
T KOG0637|consen 273 ----A--LKVMPRPMRMLLIVTLLTWIAWFPFLLFDTDFMGREVYGGDPKADENSEAKKLYNAGVRMGCLGLMLNSIVLG 346 (498)
T ss_pred ----h--HhhCChhHHHHHHHHHHHHHHHHHHHHHHHHhcchHhhCCCCCCCcchhHHHHHHhccccchHHHHHHHHHHH
Confidence 0 11123677888888888888888887777777644 34433211 1233445556666
Q ss_pred HHHHHHHHHhHHhhhcCC
Q 014481 387 LVTSIAAQFADNLIATGV 404 (423)
Q Consensus 387 ~~~~~~g~l~dr~~~r~~ 404 (423)
+-+....++.+|+|-|+.
T Consensus 347 i~S~~~~~l~~~~g~r~~ 364 (498)
T KOG0637|consen 347 IYSLLVEKLSRKFGTRKR 364 (498)
T ss_pred HHHHHHHHHHHhcCcceE
Confidence 777788888999985433
No 213
>PRK09669 putative symporter YagG; Provisional
Probab=99.03 E-value=4.5e-09 Score=101.52 Aligned_cols=121 Identities=10% Similarity=0.086 Sum_probs=94.8
Q ss_pred cchhhHHHHHHHHHHHhhhhhhhhHhhHhcCchHHHHHHHHHHHHHHHHHHh-hhHHHHHHHHHHHHHhhcccchHhHHH
Q 014481 148 SSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPLL-AGFMPGLVLSRVLVGIGEGVSPSAATD 226 (423)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~G~~~~~~~~~~~~ 226 (423)
+...+.+.....+...++.+++++++||+|+|+.+.++.++.++........ .++.+.+++..++.|++.+...+...+
T Consensus 263 ~~~~~~~~~~~~i~~ii~~~~~~~l~~r~gk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~a 342 (444)
T PRK09669 263 PDLATLFLVTGMIAGLFGALLSERLLGKFDRVRAFKWTIVAFVILSALIFFIPPSNVWLIFALNILFNFIQNLTTPLQWS 342 (444)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444556666778888899999999999999999998877665443322222 356666777888999999999999999
Q ss_pred HHHhcCCC-------CchhhHHHHHHhhhhhHHHHHHhhHHHhhhccCc
Q 014481 227 LIARSIPL-------EERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGW 268 (423)
Q Consensus 227 ~i~~~~~~-------~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw 268 (423)
+++|..+. +..|..++.+.....+|..+|+.++|.+.+..|+
T Consensus 343 m~ad~~d~~e~~~G~r~~g~~~s~~~~~~klg~alg~~i~g~ll~~~Gy 391 (444)
T PRK09669 343 MFSDVVDYEEKRSGRRLDGLVFSTNLFAIKLGLAIGGAVVGWILAWVDY 391 (444)
T ss_pred HHHhhhhhhhhhcCcCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 99998852 2346678899999999999999999999887665
No 214
>PRK11043 putative transporter; Provisional
Probab=99.03 E-value=1.8e-08 Score=96.06 Aligned_cols=135 Identities=11% Similarity=0.090 Sum_probs=102.2
Q ss_pred hhhHHHhhhhhCCCcchhhHHHHHHHHHHHhhhhhhhhHhhHhcCchHHHHHHHHHHHHHHHHHH----hhhHHHHHHHH
Q 014481 134 SVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPL----LAGFMPGLVLS 209 (423)
Q Consensus 134 ~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~ 209 (423)
....|.+.+++|.+..+.|+......++..++.++.+++.||+|+|+.+....++.+++.+.+.. ..++.+.+++.
T Consensus 223 ~~~~p~~~~~~g~s~~~~g~~~~~~~~~~~~g~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (401)
T PRK11043 223 LTGSPFILEQMGYSPADIGLSYVPQTIAFLVGGYGCRAALQKWGGEQLLPWLLVLFAVSVIAIWLASLLSHPSLVPLLIP 302 (401)
T ss_pred HHHhHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHhccCcHHHHHHH
Confidence 34466667778999999999888888999999999999999999998776655544444332211 12344455566
Q ss_pred HHHHHhhcccchHhHHHHHHhcCCCCchhhHHHHHHhhhhhHHHHHHhhHHHhhhccCch
Q 014481 210 RVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWE 269 (423)
Q Consensus 210 ~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~ 269 (423)
..+.|++.+...+...+...+..| +++++++|+++.....+..+++.+.+.+.+.....
T Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~~~~~~~~~~g~l~~~~~~~ 361 (401)
T PRK11043 303 FCVMAAANGAIYPIVVAQALRPFP-QATGKAAALQNTLQLGLCFLASLLVSALISTPLLT 361 (401)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhCc-ccChHHHHHHHHHHHHHHHHHHHHHHHccCCChhH
Confidence 677888888888888888777776 68999999999988888899999999887753333
No 215
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=98.98 E-value=5.4e-08 Score=86.97 Aligned_cols=169 Identities=16% Similarity=0.073 Sum_probs=130.1
Q ss_pred HHHHHHHHHhhhhhhhhhHHHhhhhhCCCcchhhHHHHHHHHHHHhhhhhhhhHhhHh-cCchHHHHHHHHHHHHHHHHH
Q 014481 119 TSLAFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIF-GGRKVLQTGVLIWSLATALLP 197 (423)
Q Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-G~r~~~~~~~~~~~~~~~~~~ 197 (423)
+.+.+.++.+..++....+|.+..|-|+|..+.|++.+...+.....++..-.+.+|. .+|+..+...+++.++.+.+.
T Consensus 213 vtLfmGlqS~~~Y~~~~WLP~ili~~G~sa~~aG~llsl~~l~~~~~~ll~P~la~R~~n~r~~~~~~~~~~l~G~~G~~ 292 (395)
T COG2807 213 VTLFMGLQSLLYYIVIGWLPAILIDRGLSAAEAGSLLSLMQLAQLPTALLIPLLARRSKNQRPLVVLALLLMLVGLVGLL 292 (395)
T ss_pred HHHHHHhhHHHHHHHHHHHHHHHHHcCCCHHHhhhHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHH
Confidence 3334445556667777889999999999999999999999999999999999999975 456666666666667766664
Q ss_pred HhhhHHHHHHHHHHHHHhhcccchHhHHHHHHhcCCC-CchhhHHHHHHhhhhhHHHHHHhhHHHhhhcc-CchHHHHHH
Q 014481 198 LLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPL-EERSRAVSFVFGGLSFGSVAGLLLAPPIIENL-GWESVFYIF 275 (423)
Q Consensus 198 ~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~i~~~~~~-~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~-gw~~~~~~~ 275 (423)
+...+-+.+. .++.|+|.|..++.....+.+..+. ++-+.-.|..+....+=..+||.+.|++.|.. +|+......
T Consensus 293 ~~P~~~~~lw--~~llG~G~G~~F~laL~li~~rs~~a~~Aa~LSgmaQg~GYllAa~GP~l~G~lhDa~gsw~~~~~~l 370 (395)
T COG2807 293 LAPGQLPILW--ALLLGLGQGGAFPLALTLILLRSSDAAIAAALSGMAQGVGYLLAAFGPWLFGFLHDATGSWSAPLVLL 370 (395)
T ss_pred HhhhhHHHHH--HHHHhCccchHHHHHHHHHHhhcCChHHHHHHHHHhhhhhHHHHhhhhhhHhHHHHhcCChHHHHHHH
Confidence 4444323333 4899999999999999999998854 45566677788888888889999999999875 499888877
Q ss_pred HHHHHHHHHHHHhh
Q 014481 276 GLLGIAWFSGFKIL 289 (423)
Q Consensus 276 ~~~~~~~~~~~~~~ 289 (423)
+...++..+.-+..
T Consensus 371 ~~~~i~m~i~Gl~a 384 (395)
T COG2807 371 ALATLLMLIFGLRA 384 (395)
T ss_pred HHHHHHHHHHHhhc
Confidence 77776665554443
No 216
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=98.97 E-value=4.8e-09 Score=97.95 Aligned_cols=163 Identities=17% Similarity=0.097 Sum_probs=137.3
Q ss_pred HHhhhhhhhhhHHHhhhhhCCCcchhhHHHHHHHHHHHhhhhhhhhHhhHhcCchHHHHHHHHHHHHHHHHHHhhhHHHH
Q 014481 126 CNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPLLAGFMPG 205 (423)
Q Consensus 126 ~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (423)
.+.....+..++-.-.++.+..+...|........+-++.-++.+++++|+|+-+++.+++.+.++=.+.+ ..-+|+|.
T Consensus 383 mG~g~~lv~tFLfWHled~~~~~~LfGv~~a~~~~gEI~~~ffs~klI~kiGHv~v~~lgLa~~~~Rf~~~-S~L~n~W~ 461 (618)
T KOG3762|consen 383 MGAGVGLVFTFLFWHLEDLGGIKTLFGVVSALCHAGEILFYFFSFKLIEKIGHVNVMYLGLACNVGRFLYY-SYLQNPWM 461 (618)
T ss_pred HHHHHHHHHHHHHHHHhhcCCcceeeeehhhhhccchHHHHHHHHHHHHHhcccceeeehhhHHHHHHHHH-HHhcCchh
Confidence 33344444444444677888888888988888888888889999999999999999999999987777666 45567799
Q ss_pred HHHHHHHHHhhcccchHhHHHHHHhcCCCCchhhHHHHHHh-hhhhHHHHHHhhHHHhhhccCchHHHHHHHHHHHHHHH
Q 014481 206 LVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFG-GLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAWFS 284 (423)
Q Consensus 206 ~~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~-~~~~g~~~g~~~~~~l~~~~gw~~~~~~~~~~~~~~~~ 284 (423)
.+-.-+++|+..+.+|.+..+|+++..||+-|+++.++... ..++|-.+|.+|+|.+.+.+|-+..|++.++.+++.++
T Consensus 462 vLPieilqgit~aliWaa~~sY~s~vaPp~l~at~Q~l~~g~f~GlG~g~GslIGG~~v~~fg~~ttf~~~giAcl~~l~ 541 (618)
T KOG3762|consen 462 VLPIEILQGITHALIWAAIISYASHVAPPGLRATAQGLLQGIFHGLGKGLGSLIGGFVVERFGARTTFRIFGIACLVTLA 541 (618)
T ss_pred eeeHHHHHHHHHHHHHHHHHHHHHhhCCCcchHHHHHHHHHHhcccCcchhhhhhhhhheeehhHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999998654 66789999999999999999999999999999887766
Q ss_pred HHHhh
Q 014481 285 GFKIL 289 (423)
Q Consensus 285 ~~~~~ 289 (423)
....+
T Consensus 542 ~~~~i 546 (618)
T KOG3762|consen 542 LFISI 546 (618)
T ss_pred HHHHh
Confidence 65554
No 217
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=98.95 E-value=4e-08 Score=95.42 Aligned_cols=173 Identities=14% Similarity=0.016 Sum_probs=125.8
Q ss_pred HHHHHHHHHHHHhhhhhhhhhHHHhhhh-hCCCc----chhhHHHHHHHHHHHhhhhhhhhHhhHhcC-----chHH--H
Q 014481 116 IGTTSLAFVICNMDKVNLSVAIIPMSHR-FGWNS----SVAGLVQSSFFWGYALSQLPGGWLAKIFGG-----RKVL--Q 183 (423)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~s~----~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~-----r~~~--~ 183 (423)
+..+++...+...........++...++ .+.+. -..+++.++..+...+.+++..++..+.+| +... .
T Consensus 274 ~l~l~~~~~~~~~~~~Q~~s~l~l~~~~~~~~~~~~~~ip~~~~~~~n~~~iil~~p~~~~~~~~l~~~~~~~~~~~k~~ 353 (475)
T TIGR00924 274 YIVLFLEAVVFWVLYAQMPTSLNFFADNNMHHEMLGMSVPVIWFQSLNPFWVVVGSPVLAMIWTRLGRKGKDPTTPLKFT 353 (475)
T ss_pred HHHHHHHHHHHHHHHHHhhhHHHHHHHHhccccccceEECHHHHHhhhHHHHHHHHHHHHHHHHHHHhCCCCCCcHHHHH
Confidence 3444444444445555555555554333 33322 226788899999888888886654444433 3433 6
Q ss_pred HHHHHHHHHHHHHHH--------hhhHHHHHHHHHHHHHhhcccchHhHHHHHHhcCCCCchhhHHHHHHhhhhhHHHHH
Q 014481 184 TGVLIWSLATALLPL--------LAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAG 255 (423)
Q Consensus 184 ~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g 255 (423)
+|.++.+++.+..+. ...++++++...++.|+|.....|...+++.+..|++.||+++|++.....+|..++
T Consensus 354 ~G~~l~~~~~~~~~~~~~~~~~~~~~s~~~~i~~~~~~~~ge~~~~p~~~~~~~~~aP~~~~g~~~g~~~l~~~~g~~l~ 433 (475)
T TIGR00924 354 LGMLFCGASFLTFAASIWFADAGGLTSPWFMVLIYLFQTLGELMISPLGLSWWTKIAPQRLMGQMLGMWFLAQAMGSLLG 433 (475)
T ss_pred HHHHHHHHHHHHHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 777887777666532 145778899999999999999999999999999999999999999999999999999
Q ss_pred HhhHHHhhhccCchHHHHHHHHHHHHHHHHHHh
Q 014481 256 LLLAPPIIENLGWESVFYIFGLLGIAWFSGFKI 288 (423)
Q Consensus 256 ~~~~~~l~~~~gw~~~~~~~~~~~~~~~~~~~~ 288 (423)
+.+.....+..+|.+.|...++..++..++.++
T Consensus 434 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 466 (475)
T TIGR00924 434 GYLATFGAVPQGVTGVFGKIGLVTLLVGVVMAL 466 (475)
T ss_pred HHHHHHHhcccchhhHHHHHHHHHHHHHHHHHH
Confidence 999988777778888888888777666554444
No 218
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=98.93 E-value=5e-08 Score=88.78 Aligned_cols=160 Identities=34% Similarity=0.490 Sum_probs=125.0
Q ss_pred HHHHHHhhhhhhhhhHHHhhhhhCCCc--chhhHHHHHHHHHHHhhhhhhhhHhhHhcCchHHHHHHHHHHHHHHHHHHh
Q 014481 122 AFVICNMDKVNLSVAIIPMSHRFGWNS--SVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPLL 199 (423)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~~~~s~--~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~~ 199 (423)
..+.............+.+..+++.+. ...++..+.+.++..++.++.|.+.||+|||+.+..+.....++.++....
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~ 89 (338)
T COG0477 10 AALLLGLDLGLLSPALPLLLSTLSLSSGRLLYGLLLSAFFLGYAIGSLLAGPLGDRYGRRKVLIIGLLLFLLGTLLLALA 89 (338)
T ss_pred HHHHHHHhcchHHHHHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHhhhhhhccccccchHHHHHHHHHHHHHHHHHHhC
Confidence 333334566666677777777777666 478999999999999999999999999999988888876544544444333
Q ss_pred hh-HHHHHHHHHHHHHhhcccchHhHHHHHHhcCCC-CchhhHHHHHHh-hhhhHHHHHHhhHHHhhhc--cCchHHHHH
Q 014481 200 AG-FMPGLVLSRVLVGIGEGVSPSAATDLIARSIPL-EERSRAVSFVFG-GLSFGSVAGLLLAPPIIEN--LGWESVFYI 274 (423)
Q Consensus 200 ~~-~~~~~~~~~~l~G~~~~~~~~~~~~~i~~~~~~-~~r~~~~~~~~~-~~~~g~~~g~~~~~~l~~~--~gw~~~~~~ 274 (423)
.. +.+.+++.|++.|++.+...+...+++.+++++ ++|+...+.... ...+|..+++.+++.+... .+|++.|.+
T Consensus 90 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (338)
T COG0477 90 PNVGLALLLILRLLQGLGGGGLLPVASALLSEWFPEATERGLAVGLVTLGAGALGLALGPLLAGLLLGALLWGWRAAFLL 169 (338)
T ss_pred ccchHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHH
Confidence 33 478899999999999999999999999999997 678999998888 6888999999887777654 579986666
Q ss_pred HHHHHHH
Q 014481 275 FGLLGIA 281 (423)
Q Consensus 275 ~~~~~~~ 281 (423)
.......
T Consensus 170 ~~~~~~~ 176 (338)
T COG0477 170 AALLGLL 176 (338)
T ss_pred HHHHHHH
Confidence 6655543
No 219
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=98.93 E-value=1.2e-06 Score=82.57 Aligned_cols=286 Identities=12% Similarity=-0.028 Sum_probs=166.6
Q ss_pred HHHHHHHHHHHHhhhhhhhhhHHHhhhhhCC-CcchhhHHHHHHHHHHHhhhhhhhhHhhHhcCchHHHHHHHHHHHH--
Q 014481 116 IGTTSLAFVICNMDKVNLSVAIIPMSHRFGW-NSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLA-- 192 (423)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~-- 192 (423)
...+....++...+.-++....+.+..+..- +---.+...-.-.+..++.++..|.+.||..|.+++..+.++--++
T Consensus 4 ~~~Ly~sh~ls~w~dR~w~Fa~~L~L~~i~p~sLl~~siygl~~~~~~~~f~~~vG~~iD~~~Rl~~~~~~l~~Qn~sv~ 83 (432)
T PF06963_consen 4 LWRLYLSHFLSTWGDRMWEFAVPLFLISIFPGSLLPVSIYGLVRSLSAILFGPWVGRWIDRSPRLKVIRTSLVVQNLSVA 83 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHhhHHHHHHHhCCcchhhHHHHHHHHHHHHH
Confidence 4456777888888888888888886666532 3333444555566677788899999999999988876664433222
Q ss_pred --HHHHHH-hh--h-----H--HHHHHHHHHHHHhhcc-cchHhHHHHHHhcC------CCCchhhHHHHHHhhhhhHHH
Q 014481 193 --TALLPL-LA--G-----F--MPGLVLSRVLVGIGEG-VSPSAATDLIARSI------PLEERSRAVSFVFGGLSFGSV 253 (423)
Q Consensus 193 --~~~~~~-~~--~-----~--~~~~~~~~~l~G~~~~-~~~~~~~~~i~~~~------~~~~r~~~~~~~~~~~~~g~~ 253 (423)
+.++.. +. . . ...+++.-.+.|.-.- .......++--||. ++..+.+..+.+.-.--+.-+
T Consensus 84 ~s~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~i~~Las~~~~iavERDWVvvi~~~~~~~La~~NA~mRRIDL~ckl 163 (432)
T PF06963_consen 84 ASCALFLLLLSYPSSSSQSSWLFIALFALLILLGAIERLASIANTIAVERDWVVVIAGGDPGALARMNATMRRIDLFCKL 163 (432)
T ss_pred HHHHHHHHHHhCCccccccchHHHHHHHHHHHHHHHHHHHHhhhhheeccchhhhhcCCChhhHHHHHHHHHHHHHHHHH
Confidence 221111 11 1 1 1112222222221111 11112222223442 234456666667677778999
Q ss_pred HHHhhHHHhhhccCchHHHHHHHHHHHHHHHHHHhh-c---cCCcCcCCC----CCcchhhhh---hhhhhhhhHHh--h
Q 014481 254 AGLLLAPPIIENLGWESVFYIFGLLGIAWFSGFKIL-Q---EGETSNGAT----LAPRSNYIN---MKKSLSASLEE--M 320 (423)
Q Consensus 254 ~g~~~~~~l~~~~gw~~~~~~~~~~~~~~~~~~~~~-~---~~~~~~~~~----~~~~~~~~~---~~~~~~~~~~~--~ 320 (423)
++|++.|.+.+..+.+...++.++..++..+.=+++ . +..|....+ ..+..+... ..+........ .
T Consensus 164 laPl~vG~l~t~~s~~~~~~~i~~~N~~S~~vEy~~l~~VY~~~P~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (432)
T PF06963_consen 164 LAPLFVGLLMTFASPVIAAIFIAGWNLASVFVEYFLLARVYNSVPALAVKKRSSESESSSDEESSSESSSDPSILKRLWN 243 (432)
T ss_pred HHHHHHHHHhhccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHhcCCCCCccccccccccccccccchhhHHHHHHH
Confidence 999999999998898888888887776654432221 1 111110000 000000000 00000000000 0
Q ss_pred ccccCCCcHHHhhhcHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHhhCCChhhHHHHHHHHHHHHHHHHHHHHHHhHHhh
Q 014481 321 GESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLI 400 (423)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~ 400 (423)
.-......|+.-+++|.+.... +..+.++...++......|+..+ |+++...|.+-....+.++.|.++..++.+|+|
T Consensus 244 ~~~~~~~~w~~Y~~q~vflas~-alalLY~TVLsf~~lmt~yl~~~-G~s~~~igi~R~~gav~Gl~gT~~~p~l~~riG 321 (432)
T PF06963_consen 244 PLRTIIRGWRTYFRQPVFLASF-ALALLYFTVLSFGGLMTAYLKSQ-GYSPSVIGIFRGLGAVFGLLGTWVYPWLMKRIG 321 (432)
T ss_pred HHHHHhccHHHHHhCHHHHHHH-HHHHHHHHHhcCcHHHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 0011134577777777665444 44444444667788899999876 999999999999999999999999999999999
Q ss_pred hcC
Q 014481 401 ATG 403 (423)
Q Consensus 401 ~r~ 403 (423)
..|
T Consensus 322 lvr 324 (432)
T PF06963_consen 322 LVR 324 (432)
T ss_pred chh
Confidence 653
No 220
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=98.86 E-value=1.5e-11 Score=119.03 Aligned_cols=180 Identities=19% Similarity=0.113 Sum_probs=113.9
Q ss_pred HHHHHHHHHHHHHHhhhhhhhhhHHHhhhhhCCCcchhhHHHHHHHHHHHhhhhhhhhHhhHhcCchHHHHHHHHHHHHH
Q 014481 114 KLIGTTSLAFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLAT 193 (423)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~ 193 (423)
+.+..+.+..+....+......+.+.+.+..+.+.. -+......+...++.++...+.||+|||+.++.+..+.++..
T Consensus 253 ~~~~~~~l~~~~~~~g~~~~~~~~~~i~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~GRr~~~i~~~~~~~~~~ 330 (451)
T PF00083_consen 253 RLLIALLLQFFQQFSGINFIFYYSPSIFENAGISNS--FLATLILGLVNFLGTLLAIFLIDRFGRRKLLIIGLLLMAICS 330 (451)
T ss_pred cccccccccccccccccccccccccccccccccccc--cccccccccccccccccccccccccccccccccccccccccc
Confidence 333333333333333434455556777777777766 222233445556677777899999999999999988877766
Q ss_pred HHHH---Hh-hhH----HHHHHHHHHHHHhhcc-cchHhHHHHHHhcCCCCchhhHHHHHHhhhhhHHHHHHhhHHHhhh
Q 014481 194 ALLP---LL-AGF----MPGLVLSRVLVGIGEG-VSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIE 264 (423)
Q Consensus 194 ~~~~---~~-~~~----~~~~~~~~~l~G~~~~-~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~ 264 (423)
+.++ .. .++ -...+++-.+..++.+ +..+....+.+|.+|.+.|+++.++......++..+++.+...+.+
T Consensus 331 ~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~g~~~~~~~~~~ElfPt~~R~~~~~~~~~~~~i~~~i~~~~~~~~~~ 410 (451)
T PF00083_consen 331 LILGIIFFLGVSSSSWWSILSIVFLALFFAFFSLGWGPLPWIYTAELFPTKVRSTGIGLSYAVGRIGGFIIPFLFPYLFN 410 (451)
T ss_pred cccccccccccccccccccccceeeeeccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 5553 11 121 0112222222222222 3345666888999999999999999999999999999999888887
Q ss_pred ccCchHHHHHHHHHHHH-HHHHHHhhccCCcC
Q 014481 265 NLGWESVFYIFGLLGIA-WFSGFKILQEGETS 295 (423)
Q Consensus 265 ~~gw~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 295 (423)
..+-...+++.+.+.++ ..+..+++||++.+
T Consensus 411 ~~~~~~~~~i~~~~~~i~~i~~~~~lpET~g~ 442 (451)
T PF00083_consen 411 NLGGWGVFLIFAGVCLIAIIFVYFFLPETKGK 442 (451)
T ss_pred cccccccchhhHHHHHHHHhheeEEEeeCCCC
Confidence 76633445555555444 45556677887654
No 221
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=98.86 E-value=1.5e-08 Score=98.13 Aligned_cols=127 Identities=16% Similarity=0.115 Sum_probs=108.5
Q ss_pred hhhhCCCcchhhHHHHHHHHHHHhhhhhhhhHhhHhcCchHHHHHHHHHHHHHHHHHHhh---------hHHHHHHHHHH
Q 014481 141 SHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPLLA---------GFMPGLVLSRV 211 (423)
Q Consensus 141 ~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~ 211 (423)
.+.+|.++.++|.+.....++.+++....+++.+|++.|+++.++.++.+++.+...... ++.+.++..-+
T Consensus 280 ~~~lG~s~~~~G~~~~~~~v~~i~g~~~~~~~~~~~~~r~~l~~~~~l~~~~~~~~~~l~~~~~~~~gi~~~~~~~~~~~ 359 (468)
T TIGR00788 280 TQCLPGGPSFSGMSKVVGNLGSLCGVGGYDRFLKTFPYRLLFGVTTLLYTLSSLFDLILVKRWNLAFGISDEVFVLGDSI 359 (468)
T ss_pred cccCCCCcchhhhHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHhCceeeeeccccccCCCCeeeeeehhH
Confidence 356899999999999999999999999999999999999999999988887764432111 22234555667
Q ss_pred HHHhhcccchHhHHHHHHhcCCCCchhhHHHHHHhhhhhHHHHHHhhHHHhhhccC
Q 014481 212 LVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLG 267 (423)
Q Consensus 212 l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g 267 (423)
+.+++.+....+...++.+..|++.+|+.++++....++|..+++.+++.+.+..|
T Consensus 360 l~~~~~g~~~~~~~~~~~~~~p~~~egt~~al~~s~~~lg~~v~~~~gg~l~~~~g 415 (468)
T TIGR00788 360 IAEVLAQLKFMPFLVLLARLCPSGCESSVFALLASILHLGSSVSGFLGVLLMETIG 415 (468)
T ss_pred HHHHHHHHHHccHHHHHHHhCCCCceehHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 88888888888889999999999999999999999999999999999999998776
No 222
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=98.85 E-value=1e-07 Score=90.84 Aligned_cols=144 Identities=17% Similarity=0.077 Sum_probs=102.2
Q ss_pred hhhhhHHHhhhhh--CCCcchhhHHHHHHHHHHHhhhhhhhhHhhHhcCchHHHHHHHHHHHHHHHHHHhhhHHHHHHHH
Q 014481 132 NLSVAIIPMSHRF--GWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPLLAGFMPGLVLS 209 (423)
Q Consensus 132 ~~~~~~~~~~~~~--~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 209 (423)
.....++.+.++. +.+....+...+.+..+..++.++++++.||+++|+++.+..++..+..++.. ..+.. ..+.+
T Consensus 250 ~~~s~l~~y~~~~~~~~~~~~a~~~~~~~~~~~~vGR~~~~~l~~r~~~~~~l~i~~~~~~~~~ll~~-~~~~~-~~~~~ 327 (410)
T TIGR00885 250 MCWTFIIQYAVRLIPGMTAGFAANYNIGAMVIFFISRFIGTWLISYLAAHKVLMAYAIIGMALCLGSI-FAGGH-VGLYC 327 (410)
T ss_pred HHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHH-HcCCh-HHHHH
Confidence 3445555554443 33444445566777788899999999999999999998888777777666553 33332 33566
Q ss_pred HHHHHhhcccchHhHHHHHHhcCCCCchhhHHHHHHhhhhhHHHHHHhhHHHhhhcc------CchHHHHHHHHHH
Q 014481 210 RVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENL------GWESVFYIFGLLG 279 (423)
Q Consensus 210 ~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~------gw~~~~~~~~~~~ 279 (423)
.++.|++.+..+|...+...+..+++.+....++... .+|+.++|++.|++.|.. +.+..|++..+..
T Consensus 328 l~~~glf~s~~fp~i~sl~~~~~g~~~~~~s~~l~~~--~~Gga~~p~l~G~~~d~~~~~~~~~~~~~~~~~~~~~ 401 (410)
T TIGR00885 328 LTLCSAFMSLMFPTIYGIALKGLGQDTKYGAAGLVMA--IIGGGIVPPLQGFIIDMKEIAAAPAVNTSFILPLLCF 401 (410)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhhhhhhHHHHHHH--HhccchHHHHHHHHHHHhcccccCccchHHHHHHHHH
Confidence 7788888899999999999999985544333333333 399999999999999954 4777777644443
No 223
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.85 E-value=1.7e-08 Score=96.44 Aligned_cols=176 Identities=14% Similarity=0.056 Sum_probs=121.9
Q ss_pred HHHHHHHHHHHHHHhhhhhhhhhHHHh-hhhhCCCcchhhHHHHHHHHHHHhhhhhhhhHhhHhcCc--------hH-HH
Q 014481 114 KLIGTTSLAFVICNMDKVNLSVAIIPM-SHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGR--------KV-LQ 183 (423)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r--------~~-~~ 183 (423)
..++.+.++.+........+...+|.+ .+-+|.+..+.|++.++..+...+..+++|.++||.-+| |. =.
T Consensus 258 ~~vwai~~~~f~~~~~~~~l~~y~PtY~~~VL~f~v~~~G~~salP~l~~~~~k~~~g~lsD~l~~~~ls~t~~rkifn~ 337 (466)
T KOG2532|consen 258 PPVWAIWISAFGGNWGFYLLLTYLPTYLKEVLGFDVRETGFLSALPFLAMAIVKFVAGQLSDRLTFRILSETTVRKIFNT 337 (466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCchHhHHHHHHh
Confidence 456677778888888888888888885 556899999999999999999999999999999998652 22 22
Q ss_pred HHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhhc-ccchHhHHHHHHhcCCCCchhhHHHHHHhhhhhHHHHHHhhHHHh
Q 014481 184 TGVLIWSLATALLPLLAGFMPGLVLSRVLVGIGE-GVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPI 262 (423)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~-~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l 262 (423)
++....++..+++++.........+..+..+.+. |...+....-..+. .+++-+..+|+.+....+.++++|.+.+.+
T Consensus 338 i~~~~~ai~l~~l~~~~~~~~~~a~~~l~~~~~~~g~~~~Gf~~~~~~~-apq~a~~l~g~~~~~~~~~~~~~P~~vg~~ 416 (466)
T KOG2532|consen 338 IAFGGPAVFLLVLAFTSDEHRLLAVILLTIAIGLSGFNISGFYKNHQDI-APQHAGFVMGIINFVGALAGFIAPLLVGII 416 (466)
T ss_pred HHHHHHHHHHHeeeecCCCcchHHHHHHHHHHHHcccchhhhHhhhhhc-cchHHHHHHHHHHHHHHHHHHHHHHheeeE
Confidence 3334444444444333322121111122222222 23333333333333 448899999999999999999999999999
Q ss_pred hh---ccCchHHHHHHHHHHHHHHHHHHhhc
Q 014481 263 IE---NLGWESVFYIFGLLGIAWFSGFKILQ 290 (423)
Q Consensus 263 ~~---~~gw~~~~~~~~~~~~~~~~~~~~~~ 290 (423)
.. ...|+++|++.+++.++..+.+.++-
T Consensus 417 ~~~~t~~eW~~VF~i~a~i~~~~~i~f~~f~ 447 (466)
T KOG2532|consen 417 VTDNTREEWRIVFLIAAGILIVGNIIFLFFG 447 (466)
T ss_pred eCCCCHHHHHHHHHHHHHHHHHhchheeEee
Confidence 94 24699999999999888776665553
No 224
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=98.85 E-value=1.2e-08 Score=92.03 Aligned_cols=165 Identities=16% Similarity=0.179 Sum_probs=125.3
Q ss_pred HHHhhhhhhhhhHHH-hhhhhCCCcchhhHHHHHHHHHHHhhhhhhhhHhhHhcCchHHH--HHHHHHHHHHHHHHHhhh
Q 014481 125 ICNMDKVNLSVAIIP-MSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQ--TGVLIWSLATALLPLLAG 201 (423)
Q Consensus 125 ~~~~~~~~~~~~~~~-~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~--~~~~~~~~~~~~~~~~~~ 201 (423)
.........-|.++. +.+.+..+..+.|+.+--..+.+.++..+.|.+.||++.-+++. .+++..++..... -+.+
T Consensus 281 ~~n~~lafLePtlslwm~e~m~~p~w~~G~~fLp~~~~y~ig~~lfg~la~k~~~~~wl~~~~gl~~~G~~~~~i-P~~~ 359 (464)
T KOG3764|consen 281 FSNSSLAFLEPTLSLWMLETMFTPGWEVGLAFLPASLSYAIGTNLFGKLADKYPHLRWLLSLGGLATVGVSSGPI-PFAT 359 (464)
T ss_pred hccchHHHhCcccHHHHHHhccCCCcceeeeecccccchhccCchHHHHHHhcCchhHHHHHHHHHHHHHHhchh-Hhhh
Confidence 344555566666666 66777866779999999999999999999999999999444333 3333433333333 3557
Q ss_pred HHHHHHHHHHHHHhhcccchHhHHHHHHhcCCCC------chhhHHHHHHhhhhhHHHHHHhhHHHhhhccCchHHHHHH
Q 014481 202 FMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLE------ERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIF 275 (423)
Q Consensus 202 ~~~~~~~~~~l~G~~~~~~~~~~~~~i~~~~~~~------~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~~~~~ 275 (423)
++..+++-++..|++.+..............+.+ ..|...++...++++|..+||.++|.+.+..|++|...+.
T Consensus 360 ~~~~L~vp~~~l~~~i~~~dasl~P~l~~lvd~rh~s~~~vYGsVyaIad~a~sla~a~GP~~gg~iv~~iGF~wl~~ii 439 (464)
T KOG3764|consen 360 SIAQLWVPNFGLGFGIGLADASLIPTLGYLVDPRHVSGFNVYGSVYAIADAAFSLAYAIGPTFGGSLVEAIGFEWLMTII 439 (464)
T ss_pred hHHHHhhhhHHHHHHHHHHHHHHhhhhHHhcchhhccccceeeeHHHHHHHHHHHhhhccccccchheeehhHHHHHHHH
Confidence 7788888888888888877777666666666433 3578999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhc
Q 014481 276 GLLGIAWFSGFKILQ 290 (423)
Q Consensus 276 ~~~~~~~~~~~~~~~ 290 (423)
++..++...+..++.
T Consensus 440 g~~n~iyapvl~ll~ 454 (464)
T KOG3764|consen 440 GILNLIYAPVLLLLR 454 (464)
T ss_pred HHHHHHHHHHHHHHH
Confidence 999888765555543
No 225
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=98.85 E-value=2e-07 Score=88.57 Aligned_cols=126 Identities=16% Similarity=0.029 Sum_probs=94.3
Q ss_pred hhhhhCCCcchhhHHHHHHHHHHHhhhhhhhhHhhHhcCchHHHHHHHHHHHHHHHHHHh--hhHHHHHHHHHHHHHhhc
Q 014481 140 MSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPLL--AGFMPGLVLSRVLVGIGE 217 (423)
Q Consensus 140 ~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~G~~~ 217 (423)
+.+.+|.+..+.+++.....++..++.++.+++.||++++........+.+......... ..+.+.+++..++.|++.
T Consensus 234 ~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 313 (394)
T PRK11652 234 MGAVLGLSSMTVSILFILPIPAAFFGAWFAGRPNKRFSTLMWQSVICCLLAGLLMWIPGWFGVMNVWTLLVPAALFFFGA 313 (394)
T ss_pred HHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHH
Confidence 444589999999999999999999999999999999984333222222222111111111 224456777788899999
Q ss_pred ccchHhHHHHHHhcCCCCchhhHHHHHHhhhhhHHHHHHhhHHHhhhcc
Q 014481 218 GVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENL 266 (423)
Q Consensus 218 ~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~ 266 (423)
+...+...++..+.+| ++++.+.++.+....+|..+++.+++.+....
T Consensus 314 ~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~lg~~~~~~~~~~~~~~~ 361 (394)
T PRK11652 314 GMLFPLATSGAMEPFP-YLAGTAGALLGGLQNIGSGLAALLSAMLPQTG 361 (394)
T ss_pred HHHHHHHHHHHHhhcc-ccchHHHHHHHHHHHHHHHHHHHHHHHccCCc
Confidence 9999999999999887 68899999999999999999999999886653
No 226
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=98.80 E-value=1.2e-07 Score=89.17 Aligned_cols=152 Identities=16% Similarity=0.140 Sum_probs=118.3
Q ss_pred HHHHHHHHHHHHhhhhhhhhhHHHhhh-hhCCCcchhhHHHHHHHHHHHhhhhhhhhHhhHhcCchHHHHHHHHHHHHHH
Q 014481 116 IGTTSLAFVICNMDKVNLSVAIIPMSH-RFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATA 194 (423)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~ 194 (423)
+...++..++......+.+....++.+ .+|.++....+.......+..++.+++.++.+|+|+|+++.++.++.+++.+
T Consensus 238 ~~~~l~~~l~~~~~~~i~~s~~~yy~~y~lg~~~l~~~~~~~~~~~~~l~~~~~~p~L~~~~gkk~~~~~~~~~~~i~~~ 317 (467)
T COG2211 238 LLLLLLMNLLLFIAFNIRGSIMVYYVTYVLGDPELFAYLLLLASGAGLLIGLILWPRLVKKFGKKKLFLIGLLLLAVGYL 317 (467)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhheeEEEEcCChHHHHHHHHHHHHHHHHHHHHhHHHHHHHhchHHHHHHHHHHHHHHHH
Confidence 334444555666666666666666443 3566677777788888888888899999999999999999999999999988
Q ss_pred HHHHhh-hHHHHHHHHHHHHHhhcccchHhHHHHHHhcCCC-------CchhhHHHHHHhhhhhHHHHHHhhHHHhhhcc
Q 014481 195 LLPLLA-GFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPL-------EERSRAVSFVFGGLSFGSVAGLLLAPPIIENL 266 (423)
Q Consensus 195 ~~~~~~-~~~~~~~~~~~l~G~~~~~~~~~~~~~i~~~~~~-------~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~ 266 (423)
+..+.. ++.+.+++..++.++|.+...+...++++|..+- +.-|...+.+....-+|..++..+.|++....
T Consensus 318 ~~~f~~~~~~~l~~~~~~i~~~g~~~~~~l~wam~~d~vDyge~~TG~R~eGi~~s~~tF~~K~g~ala~~~~g~~L~~~ 397 (467)
T COG2211 318 LLYFTPAGSVVLIVVALIIAGVGTGIANPLPWAMVADTVDYGEWKTGVRREGIVYSGMTFFRKLGLALAGFIPGWILGAI 397 (467)
T ss_pred HHHhhcCcchHHHHHHHHHHHHHhhccccccHHHhcchhhHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 775444 4567788888999999999999999999888742 33467788888888899999998888887655
Q ss_pred C
Q 014481 267 G 267 (423)
Q Consensus 267 g 267 (423)
|
T Consensus 398 G 398 (467)
T COG2211 398 G 398 (467)
T ss_pred C
Confidence 4
No 227
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=98.80 E-value=3.1e-08 Score=93.07 Aligned_cols=120 Identities=17% Similarity=0.123 Sum_probs=88.2
Q ss_pred hhhhhhHHH-hhhhhCCCcchhhHHHHHHHHHHHhhhhhhhhHhhHhcCchHHHHHHHHHHHHHHHHHHhhh---HHHHH
Q 014481 131 VNLSVAIIP-MSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPLLAG---FMPGL 206 (423)
Q Consensus 131 ~~~~~~~~~-~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~~---~~~~~ 206 (423)
.......|. +.+.+|.++.+.+++.+...+...++.+++|++.||+|+|+.+..+..+...+..++..... +.+.+
T Consensus 242 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (366)
T TIGR00886 242 LGVSSIFAMFFKDQFGLSKVTAGAYASLGGLLGSLARPLGGAISDRLGGARKLLMSFLGVAMGAFLVVLGLVSPLSLAVF 321 (366)
T ss_pred HHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHhhccchHHHhhccchhHHHHHHHHHHHHHHHHhcCCCcchHHHH
Confidence 334444454 45668999999999999999999999999999999999998888777666565544432222 44544
Q ss_pred HHHHHHHHhhcccchHhHHHHHHhcCCCCchhhHHHHHHhhhhhH
Q 014481 207 VLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFG 251 (423)
Q Consensus 207 ~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g 251 (423)
++..++.+++.+...+...+++++..| +++|+++|+.+...++|
T Consensus 322 ~~~~~~~~~~~g~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~g 365 (366)
T TIGR00886 322 IVLFVALFFFSGAGNGSTFALVPHIFR-RATGAVSGLVGAIGNLG 365 (366)
T ss_pred HHHHHHHHHHhccccchhhhcchhhch-hhcccHHHHHHHhccCC
Confidence 555555555556666667778888887 79999999998887776
No 228
>PRK11462 putative transporter; Provisional
Probab=98.77 E-value=2.9e-07 Score=89.19 Aligned_cols=141 Identities=7% Similarity=-0.034 Sum_probs=92.5
Q ss_pred hhhhhhhhhHHHhhhhhCCCcchhhHHHHHHHHHHHhhhhhhhhHhhHhcCchHHHHHHHHHHHHHHHHHHhhh-HHHHH
Q 014481 128 MDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPLLAG-FMPGL 206 (423)
Q Consensus 128 ~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 206 (423)
............+.++..-++...+.+.+.+.++.+++.+++++++||+|+|+.+..+..+.++..++..+... +...+
T Consensus 242 ~~~~~~~~~~~y~~~y~~g~~~~~~~~l~~~~i~~iig~~l~~~l~~r~gkk~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (460)
T PRK11462 242 LAVCVRGGAMMYYVTWILGTPEVFVAFLTTYCVGNLIGSALAKPLTDWKCKVTIFWWTNALLAVISLAMFFVPMQASITM 321 (460)
T ss_pred HHHHHHHhHhhhhhhhhcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhchhHHHHH
Confidence 33333333334443343334445567777888889999999999999999999887655544443333322222 22334
Q ss_pred HHHHHHHHhhcccchHhHHHHHHhcCC-------CCchhhHHHHHHhhhhhHHHHHHhhHHHhhhccCc
Q 014481 207 VLSRVLVGIGEGVSPSAATDLIARSIP-------LEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGW 268 (423)
Q Consensus 207 ~~~~~l~G~~~~~~~~~~~~~i~~~~~-------~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw 268 (423)
++.-++.|++.+...+...++++|..+ .+.-|..++.......+|..+|+.++|.+.+..|+
T Consensus 322 ~~~~~l~g~~~~~~~~l~~~m~ad~~d~~e~~tG~r~~g~~~a~~~f~~Klg~alg~~i~g~iL~~~Gy 390 (460)
T PRK11462 322 FVFIFVIGVLHQLVTPIQWVMMSDTVDYGEWCNGKRLTGISFAGTLFVLKLGLAFGGALIGWMLAYGGY 390 (460)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhHhhhHHhcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 455566788777777767778887765 33345556777788999999999999988866554
No 229
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=98.77 E-value=4.6e-07 Score=82.98 Aligned_cols=171 Identities=19% Similarity=0.145 Sum_probs=128.1
Q ss_pred HHHHHHHHHHHHHHHhhhhhhhhhHHHhhhhhCCCcchhhHHHHHHHHHHHhhhhhhhhHhh-HhcCchHHHHHHHHHHH
Q 014481 113 YKLIGTTSLAFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAK-IFGGRKVLQTGVLIWSL 191 (423)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d-r~G~r~~~~~~~~~~~~ 191 (423)
++.+..+++..+...+...+.- |+=.+-||++..+...+......|..++-...|++.. |.++++...+++.+..+
T Consensus 211 ~~f~~fl~l~t~a~~~QD~iLE---Pygg~Vfgmsv~eTT~Lta~~~~G~L~G~~~~g~~l~~~~~~~~~a~~G~~~~~~ 287 (403)
T PF03209_consen 211 RRFFVFLFLGTLAFFMQDVILE---PYGGEVFGMSVGETTRLTAFWGGGTLLGMLLAGFLLSRRLGKKRTAALGCLLGAL 287 (403)
T ss_pred hHHHHHHHHHHHHHHhhHHHcC---CchhHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHH
Confidence 3444444444443333333322 3344568999999999999999999999999999877 67888888788777666
Q ss_pred HHHHH--HHhhhHHHHHHHHHHHHHhhcccchHhHHHHHHhcCCCCchhhHHHHHHhhhhhHHHHHHhhHHHhhhc----
Q 014481 192 ATALL--PLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIEN---- 265 (423)
Q Consensus 192 ~~~~~--~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~---- 265 (423)
+..+. +....+.+.+...-++.|++.|.......+.+-+...+++.|..+|.+.....++..+|..++|.+.|.
T Consensus 288 ~f~lii~a~~~~~~~~~~~~~~l~G~g~G~f~vgals~mM~lt~~~~aG~~mG~WGaaQA~A~Glg~~~GG~~~D~~~~~ 367 (403)
T PF03209_consen 288 AFALIILAGPLGSPWLFRPGVFLLGLGNGLFTVGALSLMMDLTSAGRAGLFMGAWGAAQAIARGLGTFLGGALRDLVRAL 367 (403)
T ss_pred HHHHHHHHHhcccchHHHHHHHHHHHhhhHHHHHHHHHHHhCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 65443 233355678889999999999999999999999999999999999999999999999999999988763
Q ss_pred ------cCchHHHHHHHHHHHHHHHHH
Q 014481 266 ------LGWESVFYIFGLLGIAWFSGF 286 (423)
Q Consensus 266 ------~gw~~~~~~~~~~~~~~~~~~ 286 (423)
.+|..+|.+.++..++.+.+.
T Consensus 368 ~~~~~~~aY~~VF~lEa~ll~~a~~ll 394 (403)
T PF03209_consen 368 FGNSPALAYGVVFALEAVLLLAALVLL 394 (403)
T ss_pred ccCCcchHHHHHHHHHHHHHHHHHHHH
Confidence 235556666666555544443
No 230
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.77 E-value=6.5e-07 Score=84.27 Aligned_cols=237 Identities=19% Similarity=0.139 Sum_probs=149.6
Q ss_pred hhHH-HHHHHHHHHhhhhhhhhHhhHhcCchHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhhcccchHhHHHHHH
Q 014481 151 AGLV-QSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIA 229 (423)
Q Consensus 151 ~~~~-~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~i~ 229 (423)
.|.. .++......+..++.+.+.|+.|+|..++++..++....+.+ +-.|-+.+++.-.+.|+|.+..+.....+++
T Consensus 51 aGy~~~aiiY~~ftv~~l~~psiv~~i~~K~~lv~ga~~y~~f~~gf--l~~N~y~~yfssallG~Gaallw~GqG~ylt 128 (461)
T KOG3098|consen 51 AGYYGQAIIYAFFTVSCLFAPSIVNFLGPKWALVIGATCYAAFPLGF--LFPNSYYLYFSSALLGFGAALLWTGQGGYLT 128 (461)
T ss_pred ccHHHHHHHHHHHHHHHHhhHHHHHHhhHHHHHHHHhHHHHHHHHHH--HhcchHHHHHHHHHhhhhHHheecccceehh
Confidence 3443 667778888999999999999999999999999988776655 3344478899999999999999999999999
Q ss_pred hcCCCCchhhHHHHHHhhhhhHHHHHHhhHHHhhhcc--------Cch-HH-------HHH---HHHHHHH---HHHHHH
Q 014481 230 RSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENL--------GWE-SV-------FYI---FGLLGIA---WFSGFK 287 (423)
Q Consensus 230 ~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~--------gw~-~~-------~~~---~~~~~~~---~~~~~~ 287 (423)
+..+++.+.+..++.......+.++|..+...+.... +-+ +. +.+ .+++..+ ..+...
T Consensus 129 ~~st~~tie~Nisi~Wai~~~~li~Ggi~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~v~~~~~~l~~i~~~ 208 (461)
T KOG3098|consen 129 SNSTRETIERNISIFWAIGQSSLIIGGIILFIYFQFSSSSAIITDGTRRLVFEVLFIDFEIKVLFGVLLAISVLSIINFD 208 (461)
T ss_pred hcCChhhHHHHHHHHHHHHHHHHHhhhHhheeeeEecccccccccchhhhhcchhhhhHHHHHHHHHHHHHHHHHhhhee
Confidence 9999999999999999888888888876654443211 111 11 111 1111111 111111
Q ss_pred hhccCCcCcCCCCCcchhhhhhhhhhhhhHHhhccccCCCcHHHhhhcHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHh-
Q 014481 288 ILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEE- 366 (423)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~- 366 (423)
+.|.+......+.. + ....+... ..-+++++++++.+....+..++.........|..+.-.
T Consensus 209 ~~p~~~~~~~~~~~-~-------~~~~~~l~---------~~~~l~~~~~ml~L~~~f~~tG~~~Sf~~~iypt~i~ft~ 271 (461)
T KOG3098|consen 209 FLPSKDVVNCKSSS-E-------TSFSELLK---------LTFKLLKTPKMLLLFPFFFYTGLETSFWISIYPTCISFTR 271 (461)
T ss_pred ecCccchhhhhhhc-c-------ccHHHHHH---------HHHHHhcCHhHHHHHHHHHHHHHHHHHHHhccchhhhhhh
Confidence 11111110000000 0 00000000 123567788888777777766665555555666554432
Q ss_pred -hCCC-hhhHHHHHHHHHHHHHHHHHHHHHHhHHhhhcCCcc
Q 014481 367 -LSLN-LTEAAWVSILPPLASVLVTSIAAQFADNLIATGVET 406 (423)
Q Consensus 367 -~g~s-~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~r~~~~ 406 (423)
.+.+ ....++.....+++.+++....+.+.+|.++.+...
T Consensus 272 ~~~~n~~~~~ai~~~~~g~g~v~~g~~~~~l~~rir~fg~~~ 313 (461)
T KOG3098|consen 272 KLGSNTTYLIAIYSIGIGLGEVIGGLDFSILSKRIRGFGRKP 313 (461)
T ss_pred hccCcchhHHHHHHHHHhHHHHHHHHHHHHHhhhhhhcccCc
Confidence 2222 233455667777888888888888888877665544
No 231
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=98.76 E-value=6.5e-09 Score=95.31 Aligned_cols=181 Identities=13% Similarity=0.065 Sum_probs=130.6
Q ss_pred HHHHHHHHHHHHHHhhhhhhhhhHHHhhhhhCCCcchhhH--------HHHH-HHHHHHhhhhhhhhHhhHhcCchHHHH
Q 014481 114 KLIGTTSLAFVICNMDKVNLSVAIIPMSHRFGWNSSVAGL--------VQSS-FFWGYALSQLPGGWLAKIFGGRKVLQT 184 (423)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~--------~~~~-~~~~~~~~~~~~g~l~dr~G~r~~~~~ 184 (423)
+.++..+...|+.-+..+..+.....+.+.+|+.+..... ...+ ...++..+-.+...++|+.|||++.+.
T Consensus 304 ~~Llgt~~~WFllDiafy~~nL~~s~I~~~ig~~~~~~~~~~~~~vA~~~~iia~~~~vPGyw~tv~~id~iGRk~iq~~ 383 (538)
T KOG0252|consen 304 KHLLGTAGTWFLLDIAFYGQNLFQSVIFSAIGVIPSANTYHELFKVAEGNLIIAVCSTVPGYWFTVYFIDIIGRKYIQLM 383 (538)
T ss_pred HHHHHHHHHHHhhhhhhhccccHHHHHHHhhccCCCcchHHHHHHHHHHHHHHHHHccCCceeEEEEEeehhhhHHHHHh
Confidence 4555666667766666666666777787877766554333 1122 223333466778889999999999999
Q ss_pred HHHHHHHHHHHHHHhhhH----HHHHH----HHHHHHHhhcccchHhHHHHHHhcCCCCchhhHHHHHHhhhhhHHHHHH
Q 014481 185 GVLIWSLATALLPLLAGF----MPGLV----LSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGL 256 (423)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~----~~~~~----~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~ 256 (423)
+.+++++..+..+ ...+ ...++ +..++.-+|=. .....+-+|.+|.+-|++..|+.....-+|+++|.
T Consensus 384 GF~~~~i~~~~~~-~~y~~~~~~~Gf~v~y~l~~ff~NFGPn---~ttfivpaE~FParvR~t~hGIsAA~GK~GAivg~ 459 (538)
T KOG0252|consen 384 GFFIMTIFFFVIA-GPYNQLENTIGFVVLYSLTFFFGNFGPN---ATTFIVPAEIFPARVRSTCHGISAASGKAGAIVGA 459 (538)
T ss_pred hHHHHHHHHHHHc-CCcccccccCceeehHHHHHHHHhcCCC---ceeEEeehhhchHHHhhhhhhHHHHhccchHHHHH
Confidence 9999998887764 3322 11222 33333334322 23345668999999999999999999999999999
Q ss_pred hhHHHhhh-----ccCchHHHHHHHHHHHHHHHHHHhhccCCcCcCC
Q 014481 257 LLAPPIIE-----NLGWESVFYIFGLLGIAWFSGFKILQEGETSNGA 298 (423)
Q Consensus 257 ~~~~~l~~-----~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (423)
..-.++.+ ..|.++++++.+.+.++..+..+++||+..+...
T Consensus 460 ~~F~~~t~~~yp~~~g~~~v~~i~~~~~~~gi~~T~l~pEtk~~~le 506 (538)
T KOG0252|consen 460 FGFLYLTDHNYPPNIGVRNVFIILAGCMLLGILFTLLIPETKGKSLE 506 (538)
T ss_pred HHhhHhhhccCCccccchHHHHHHHHHHHHhHheeEEeecccccCHH
Confidence 99999998 6789999999999999998888899977655433
No 232
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=98.72 E-value=5.2e-07 Score=81.98 Aligned_cols=164 Identities=19% Similarity=0.170 Sum_probs=126.6
Q ss_pred HHHHHHHHHHHHhhhhhhhhhHHHhhhh-hCCCcchhhHHHHHHHHHHHhhhhhhhhHhhHhcCchHHHHHHHHHHHHHH
Q 014481 116 IGTTSLAFVICNMDKVNLSVAIIPMSHR-FGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATA 194 (423)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~ 194 (423)
+....++.++...........++.+.++ .|.+..+.....+.+..+.++|.+++.++..|+...|.+.+..++..+.++
T Consensus 238 ~~~gvl~~FlYVG~Eva~gsfl~~y~~~~~g~~~~~aa~~~s~~~~~~~vGRFig~~lm~~~~~~k~Laf~a~~~ill~~ 317 (422)
T COG0738 238 LRLGVLAIFLYVGAEVAIGSFLVSYLEELLGLNEQQAAYYLSFFWVGFMVGRFIGSALMSRIKPEKYLAFYALIAILLLL 317 (422)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHH
Confidence 3445555566666666777777776666 888999999999999999999999999999999999999888766555554
Q ss_pred HHHHhhhHHHHHHHHHHHHHhhcccchHhHHHHHHhcCCCCchhhHHHHHHhhhhhHHHHHHhhHHHhhhccCchHHHHH
Q 014481 195 LLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYI 274 (423)
Q Consensus 195 ~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~~~~ 274 (423)
.. .+.++ ..-+.+.++.|+..+..+|...+...+..+ +.....|..-.+..+|+.+-|.+.|++.|..|-...+..
T Consensus 318 ~~-~l~~g-~v~~~~l~~ig~F~simfPTIfslal~~l~--~~ts~~s~~l~maivGGAiiP~l~G~i~d~~g~~~~~~~ 393 (422)
T COG0738 318 AV-ALIGG-VVALYALFLIGLFNSIMFPTIFSLALKNLG--EHTSVGSGLLVMAIVGGAIIPPLQGVIADMFGIQLTFLI 393 (422)
T ss_pred HH-HHhcC-hHHHHHHHHHHHHhHHHHHHHHHHHHhccC--ccccccceeeeeheecchHHHHHHHHHHHhhhhHHHHHH
Confidence 44 45565 444556688899999999999999999998 444555666667788999999999999999998877774
Q ss_pred HHHHHHHHH
Q 014481 275 FGLLGIAWF 283 (423)
Q Consensus 275 ~~~~~~~~~ 283 (423)
...++.+..
T Consensus 394 ~pllc~lyV 402 (422)
T COG0738 394 VPLLCYLYV 402 (422)
T ss_pred HHHHHHHHH
Confidence 444444433
No 233
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=98.72 E-value=5.8e-07 Score=87.96 Aligned_cols=136 Identities=15% Similarity=0.033 Sum_probs=100.9
Q ss_pred hhHHHHHHHHHHHhhhhhh----hhHhhHhcCchHHHHHHHHHHHHHHHHHHhhh--------HHHHHHHHHHHHHhhcc
Q 014481 151 AGLVQSSFFWGYALSQLPG----GWLAKIFGGRKVLQTGVLIWSLATALLPLLAG--------FMPGLVLSRVLVGIGEG 218 (423)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~----g~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~l~G~~~~ 218 (423)
.+++.++..+...+..++. +++.+|++..+.+.+++++.+++.+....... +.++++...++.|+|..
T Consensus 318 ~~~~~s~n~i~iil~~p~~~~~~~~l~~r~~~~~~~~~G~~l~~l~f~~l~~~~~~~~~~~~vs~~~~~~~~~l~~~ge~ 397 (500)
T PRK09584 318 PEQYQALNPFWIMIGSPILAAIYNKMGDRLPMPHKFAIGMVLCSGAFLVLPLGAKFANDAGIVSVNWLIASYGLQSIGEL 397 (500)
T ss_pred HHHHHHHhHHHHHHHHHHHHHHHHHhCcCCCcHHHHHHHHHHHHHHHHHHHHHHHhcCCCCccCHHHHHHHHHHHHHHHH
Confidence 5677777777777776666 55555566667888888998888877643322 14578889999999999
Q ss_pred cchHhHHHHHHhcCCCCchhhHHHHHHhhhhhHHHHHHhhHHHhhh----------ccCchHHHHHHHHHHHHHHHHH
Q 014481 219 VSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIE----------NLGWESVFYIFGLLGIAWFSGF 286 (423)
Q Consensus 219 ~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~----------~~gw~~~~~~~~~~~~~~~~~~ 286 (423)
...|...+++.+..|++.||+++|++.....+|..++..+.+.... ..+..+.|...++.+++..++.
T Consensus 398 ~~~p~g~s~~~~~aP~~~rg~~~g~~~l~~a~g~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~a~~~ 475 (500)
T PRK09584 398 MISGLGLAMVAQLVPQRLMGFIMGSWFLTTAGAALIAGYVANLMAVPDNVTDPLMSLEVYGRVFLQIGIATAVIAVLM 475 (500)
T ss_pred HHhHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhhhhhHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999988888888777766653221 1135677877777765544333
No 234
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=98.62 E-value=2.3e-06 Score=68.79 Aligned_cols=109 Identities=16% Similarity=0.131 Sum_probs=91.5
Q ss_pred HHHHHHHHHHHhhhhhhhhHhhHhcCchHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhhcccchHhHHHHHHhcC
Q 014481 153 LVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSI 232 (423)
Q Consensus 153 ~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~i~~~~ 232 (423)
.-.++......+..++...+.+++|.|+.++++.+++.+-.... +-.+.+.++.+-++.|++.+..+++...++.+..
T Consensus 41 ~slai~Y~~~~~s~l~~P~iv~~lg~K~sm~lg~~~y~~y~~~~--~~~~~~~l~~~s~l~G~~~a~lW~aqg~ylt~~s 118 (156)
T PF05978_consen 41 YSLAILYGSFAISCLFAPSIVNKLGPKWSMILGSLGYAIYIASF--FYPNSYTLYPASALLGFGAALLWTAQGTYLTSYS 118 (156)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHhhHHHHHHHHHHHHHHHHHH--HhhhHHHHHHHHHHHhhhhHHhhHhhhHHHHHcC
Confidence 34455666677888888999999999999999999987655443 4455688899999999999999999999999999
Q ss_pred CCCchhhHHHHHHhhhhhHHHHHHhhHHHhh
Q 014481 233 PLEERSRAVSFVFGGLSFGSVAGLLLAPPII 263 (423)
Q Consensus 233 ~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~ 263 (423)
+++++++..+++......+.++|.++.-.+.
T Consensus 119 ~~~~~~~~~~ifw~i~~~s~i~G~~~~~~~~ 149 (156)
T PF05978_consen 119 TEETIGRNTGIFWAIFQSSLIFGNLFLFFIF 149 (156)
T ss_pred CHHHHhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999989888887765553
No 235
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=98.62 E-value=2.5e-06 Score=76.67 Aligned_cols=261 Identities=13% Similarity=0.077 Sum_probs=158.9
Q ss_pred HHHHHHHHHHHHHHHhhhhhhhhhHHHhhhhhCCCcchhhHHHHHHHHHHHhhhhhhhhHhh-----HhcCchHHHHH-H
Q 014481 113 YKLIGTTSLAFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAK-----IFGGRKVLQTG-V 186 (423)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d-----r~G~r~~~~~~-~ 186 (423)
++.+..+.+.+.+++.-..... .+|.+.+.-|.|.++.+....++. . ...-++|.++.| |+||||..++- .
T Consensus 30 ~~~illLl~LYllQGiP~GL~~-~iP~lL~ak~vSyt~~a~fS~ay~-P-~sLKllWaPiVDs~y~k~~GrrksWvvp~q 106 (510)
T KOG3574|consen 30 RSSILLLLFLYLLQGIPLGLIG-AIPLLLQAKGVSYTSQAIFSFAYW-P-FSLKLLWAPIVDSVYSKRFGRRKSWVVPCQ 106 (510)
T ss_pred hhhHHHHHHHHHHcCCchhHhh-hhHHHhcCCCcchhhhhhhhhhhh-H-HHHHHHHHhhhHHHHHHhhccccceeeehH
Confidence 4556667777888888777777 899988888888877765543322 1 134577889999 99999987653 3
Q ss_pred HHHHHHHHHHHHhh----------hHHHHHHHHHHHHHhhcccchHhHHHHHHhcCCCCchhhHHHHHHhhhhhHHHHHH
Q 014481 187 LIWSLATALLPLLA----------GFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGL 256 (423)
Q Consensus 187 ~~~~~~~~~~~~~~----------~~~~~~~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~ 256 (423)
.+.+..+.+++... ++...+....++.-+..+....+...+.-.+..+++.|.+......+...|..+|.
T Consensus 107 ~llG~~mllLs~~v~~~~g~ng~~p~v~~lt~~f~LLnflaAtQDIAVDgwALtmLs~e~lgyaST~q~Vg~~~GyfL~~ 186 (510)
T KOG3574|consen 107 YLLGLFMLLLSYLVDRGLGGNGGLPNVVALTLLFLLLNFLAATQDIAVDGWALTMLSRENLGYASTCQSVGQTAGYFLGN 186 (510)
T ss_pred HHHHHHHHHHhhCCCcccccCCCCcchHHHHHHHHHHHHHHhhhhhhhhHHHHHhcCHhhcCchhHHHHHHHhhhHHhhc
Confidence 33333333332221 12223333445666777777788888888888888988888877777777777776
Q ss_pred hhHHHhhh-------ccCc---------hHHHHHHHHHHHHHHHHHHhhccCCcCcCCCCCcchhhhhhhhhhhhhHHhh
Q 014481 257 LLAPPIIE-------NLGW---------ESVFYIFGLLGIAWFSGFKILQEGETSNGATLAPRSNYINMKKSLSASLEEM 320 (423)
Q Consensus 257 ~~~~~l~~-------~~gw---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (423)
.+.-.+.. ..+| ...+++.+.+.++...+..+..++++.... ++......+..
T Consensus 187 ~ifLaL~s~dF~N~y~rs~P~~~g~ItL~gy~~fwg~~~~vat~Lv~~~kke~~~~~~----~e~~~~i~~~y------- 255 (510)
T KOG3574|consen 187 VVFLALESPDFCNTYLRSIPLDQGFITLAGYLWFWGALFIVATTLVALLKKENDESVD----EELELGIHESY------- 255 (510)
T ss_pred ceeeEecChhhhhHHHhcCcCccceEEhhHHHHHHHHHHHHHHHHHHHhcCCCchhhh----hhhhcCHHHHH-------
Confidence 55433322 1122 234555666666655454454444332211 11111111100
Q ss_pred ccccCCCcHHHhhhcHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHhhCCChhhHHHHHHHHHHHHHHHHHHHHH
Q 014481 321 GESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQ 394 (423)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~ 394 (423)
.-++++++-|.+..++......-.++.+.....+.-+.| +|++....++...+..-.+++.....|.
T Consensus 256 ------k~l~~vLklk~v~~la~i~lt~K~gf~a~da~t~LkLle-~Gv~ke~Lal~~v~~~plqI~l~~~~gk 322 (510)
T KOG3574|consen 256 ------KLLRDVLKLKSVRWLAGILLTGKLGFQAADALTSLKLLE-HGVPKEELALIAVPLVPLQIALPLYIGK 322 (510)
T ss_pred ------HHHHHHHcCccHHHHHHHHHHHHHHhhhhhhccchHHHH-cCCChhHheeeeeehhhHHHhhhhhhee
Confidence 014567777888777777777888888888888888887 5999888776554433344443333333
No 236
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=98.61 E-value=1.6e-06 Score=84.43 Aligned_cols=138 Identities=14% Similarity=0.040 Sum_probs=104.2
Q ss_pred hhHHHHHHHHHHHhhhhhhhhHhhHhcCchH-------HHHHHHHHHHHHHHHH-----Hh----hhHHHHHHHHHHHHH
Q 014481 151 AGLVQSSFFWGYALSQLPGGWLAKIFGGRKV-------LQTGVLIWSLATALLP-----LL----AGFMPGLVLSRVLVG 214 (423)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~-------~~~~~~~~~~~~~~~~-----~~----~~~~~~~~~~~~l~G 214 (423)
.+++.+...+...+..++.+++.||+++|+. +.+|+++.+++.+..+ .. ..+.++++...++.|
T Consensus 311 ~~~~~~~n~~~iii~~pl~~~l~~rl~~r~~~~~~~~k~~~G~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~i~~~~l~g 390 (489)
T PRK10207 311 PVSFQALNPFWVVVASPILAGIYTHLGSKGKDLSMPMKFTLGMFLCSLGFLTAAAAGMWFADAQGLTSPWFIVLVYLFQS 390 (489)
T ss_pred HHHHHhHhHHHHHHHHHHHHHHHHHHhhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCHHHHHHHHHHHH
Confidence 3566667777888899999999999999974 6777777666654321 11 124567778889999
Q ss_pred hhcccchHhHHHHHHhcCCCCchhhHHHHHHhhhhhHHHHHHhhHHHhhh----------ccCchHHHHHHHHHHHHHHH
Q 014481 215 IGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIE----------NLGWESVFYIFGLLGIAWFS 284 (423)
Q Consensus 215 ~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~----------~~gw~~~~~~~~~~~~~~~~ 284 (423)
+|.+...+...+++.+..|++.++.++|++.....+|..+|..++..... .....+.|...++.+++..+
T Consensus 391 ~Ge~~~~~~g~~~~~~~aP~~~~g~~~g~~~l~~~ig~~lg~~l~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~v 470 (489)
T PRK10207 391 LGELFISALGLAMIAALVPQHLMGFILGMWFLTQAAAFLLGGYVATFTAVPDNITDPLETLPVYTNVFGKIGLVTLGVAV 470 (489)
T ss_pred HHHHHHhHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhhhhhHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999888865521 01245667777766665544
Q ss_pred HHHh
Q 014481 285 GFKI 288 (423)
Q Consensus 285 ~~~~ 288 (423)
+++.
T Consensus 471 ~~~~ 474 (489)
T PRK10207 471 VMAL 474 (489)
T ss_pred HHHH
Confidence 4443
No 237
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=98.57 E-value=2.2e-06 Score=84.34 Aligned_cols=183 Identities=19% Similarity=0.109 Sum_probs=121.5
Q ss_pred hHHHHHHHHHHHHHHHhhhhhhhhhHHHhhhhhCCCcchhhHHHHHHHHHHHhhhhhhhhHhhHhcCchHHHHHHHHHHH
Q 014481 112 RYKLIGTTSLAFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSL 191 (423)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~ 191 (423)
+++.++.+.+..+.+..+......+.+.+.+..|.+... .+...+..+...++..+...+.||+|||+.++.+...+.+
T Consensus 293 ~~~~~i~~~l~~fqq~tG~~~~~~Y~~~if~~~g~~~~~-~~~~~~~~~v~~~~t~~~~~lvd~~gRr~lll~s~~~m~~ 371 (513)
T KOG0254|consen 293 RKRLIIGLLLQLFQQLTGINYVFYYSTTIFKSAGLKSDT-FLASIILGVVNFLGTLVATYLVDRFGRRKLLLFGAAGMSI 371 (513)
T ss_pred HHHHHHHHHHHHHHHHhCCceEEeehHHHHHhcCCCCch-HHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHhHHHHHH
Confidence 345555666666667777777777888888888877554 5566667777778888889999999999999999999988
Q ss_pred HHHHHHHhhhH------------HHHHHHHHHHHHhhcccchHhHHHHHHhcCCCCchhhHHHHHHhhhhhHHHHHHhhH
Q 014481 192 ATALLPLLAGF------------MPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLA 259 (423)
Q Consensus 192 ~~~~~~~~~~~------------~~~~~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~ 259 (423)
+.++++..... +..+....+.......+..+....+.+|.+|.+-|+++.++......+...+-....
T Consensus 372 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~f~~g~g~v~w~~~sEifp~~~r~~~~s~~~~~n~~~~~~v~~~~ 451 (513)
T KOG0254|consen 372 CLVILAVVGVFALYYPNSSKGAGWLAIVFLCLFIFSFAIGWGPVPWVIVSEIFPLRLRSKGASLAVAVNWLWNFLISFFF 451 (513)
T ss_pred HHHHHHHHHHHhccCCCcccchhHHHHHHHHHHHHHHhcccccchhhhhhccCcHhHHhhhHHHHHHHHHHHHHHHHHHH
Confidence 88766433211 112222222222333344466667899999999999999997777666655554444
Q ss_pred HHhhhccCchHHHHHHHHHHHHHHH--HHHhhccCCcC
Q 014481 260 PPIIENLGWESVFYIFGLLGIAWFS--GFKILQEGETS 295 (423)
Q Consensus 260 ~~l~~~~gw~~~~~~~~~~~~~~~~--~~~~~~~~~~~ 295 (423)
..+.+..++...|...+....+..+ ..+++||++..
T Consensus 452 ~~~~~~~~~~~~f~~f~~~~~~~~~~fv~~~~pETkg~ 489 (513)
T KOG0254|consen 452 PFITEALGIGGTFGYFGGICLLSLIIFVFFFVPETKGL 489 (513)
T ss_pred HHHHHhccccchHHHHHHHHHHHHHHHheEEcccCCCC
Confidence 4444443445566666555554433 55566776543
No 238
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=98.56 E-value=3.9e-06 Score=80.26 Aligned_cols=156 Identities=12% Similarity=-0.012 Sum_probs=100.5
Q ss_pred HHHhhhhhhhhhHHHh-hhhhCCCcchhhHHHHHHHHHHHhhhhhhhhHhhHhcCchHHHHHHHHHHHHHHHHHH----h
Q 014481 125 ICNMDKVNLSVAIIPM-SHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPL----L 199 (423)
Q Consensus 125 ~~~~~~~~~~~~~~~~-~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~----~ 199 (423)
+.......+....|.+ .+.+|.+..+.++.......+..++..+.+++.++.++++.+.....+..++.++... .
T Consensus 229 ~~~~~~~~~~~~~P~~l~~~~g~s~~~~gl~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~ig~~l~~~~~~~~ 308 (413)
T PRK15403 229 LSYIPMMSWVAVSPVILIDAGGMTTSQFAWTQVPVFGAVIVANAIVARFVKDPTEPRFIWRAVPIQLVGLALLIVGNLLW 308 (413)
T ss_pred HHHHHHHHHHHhChHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchhHHHHHHHHHHHHHHHHHHHHHHc
Confidence 3333334454556654 4556999999999988888888888888888775554444433222222222222211 2
Q ss_pred hhHHHHHHHHHHHHHhhcccchHhHHHHHHhcCCCCchhhHHHHHHhhhhhHHHHHHhhHHHhhhccCchHHHHHHHHHH
Q 014481 200 AGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLG 279 (423)
Q Consensus 200 ~~~~~~~~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~~~~~~~~~ 279 (423)
.++++..++..++.++|.+...+......- .-....+|++.++.+.....+..+++.+++++.+. +-.+.|...+++.
T Consensus 309 ~~~~~~~~~~~~l~~~G~~~~~p~~~~~al-~~~~~~~G~a~a~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~ 386 (413)
T PRK15403 309 PHVWLWSVLGTSLYAFGIGLIFPTLFRFTL-FSNNLPKGTVSASLNMVILMVMAVSVEIGRWLWFN-GGRLPFHLLAVVA 386 (413)
T ss_pred cccHHHHHHHHHHHHHHHHHHhHHHHHHHh-ccCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHc-CCchHHHHHHHHH
Confidence 334334567778888888887777664332 11223589999999999999999999999988766 5566776666555
Q ss_pred HHH
Q 014481 280 IAW 282 (423)
Q Consensus 280 ~~~ 282 (423)
.+.
T Consensus 387 ~~~ 389 (413)
T PRK15403 387 GVI 389 (413)
T ss_pred HHH
Confidence 443
No 239
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=98.55 E-value=3.2e-06 Score=81.14 Aligned_cols=178 Identities=10% Similarity=-0.012 Sum_probs=125.3
Q ss_pred HHHHHHHHHHHHHhhhhhhhhhHHH-hhh-hhCCCcc------h----hhHHHHHHHHHHHhhhhhhhhHhhHhcC-chH
Q 014481 115 LIGTTSLAFVICNMDKVNLSVAIIP-MSH-RFGWNSS------V----AGLVQSSFFWGYALSQLPGGWLAKIFGG-RKV 181 (423)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~s~~------~----~~~~~~~~~~~~~~~~~~~g~l~dr~G~-r~~ 181 (423)
.+..+++.+++.+++...+..+... +.+ .|+.++. + -.+....+.+...+.+++.-++.+|+|+ |++
T Consensus 259 ~m~~l~~vqffsW~a~f~~~~y~T~~vg~~v~~~~~~~~~~y~~gvr~G~~~l~~~s~~~~i~s~~l~~l~~~~g~~k~~ 338 (477)
T TIGR01301 259 PVWILLLVTCLNWIAWFPFILFDTDWMGREVYGGSVNQGAKYDDGVRAGAFGLMLNSVVLGITSIGMEKLCRGWGAGKRL 338 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccHHHHHHHcCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhH
Confidence 4455666777777666665555444 332 2443221 1 2344455666666777788889999995 777
Q ss_pred HHHHHHHHHHHHHHHHHhhh---H-----------------HHHHHHHHHHHHhhcccchHhHHHHHHhcCCC--Cchhh
Q 014481 182 LQTGVLIWSLATALLPLLAG---F-----------------MPGLVLSRVLVGIGEGVSPSAATDLIARSIPL--EERSR 239 (423)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~---~-----------------~~~~~~~~~l~G~~~~~~~~~~~~~i~~~~~~--~~r~~ 239 (423)
..++.++.+++.+...+.+. + .+..++...+.|+..+......++++++..++ ++.|.
T Consensus 339 ~~~s~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Gi~~A~~~siPfal~s~~~~~~~~~~G~ 418 (477)
T TIGR01301 339 WGIVNIILAICLAATVLVTYVAKNSRYYDGDGESLPPPTGIKASALIVFAILGIPLAITYSIPFALASIRSSNLGAGQGL 418 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhhccccccccccccCcchhhHHHHHHHHHHhhHHHHHHHHHhHHHHHHHccccCCCCcc
Confidence 78888887777766643332 1 26677788899999999999999999999984 45699
Q ss_pred HHHHHHhhhhhHHHHHHhhHHHhhhccC--chHHHHHHHHHHHHHHHHHH-hhccC
Q 014481 240 AVSFVFGGLSFGSVAGLLLAPPIIENLG--WESVFYIFGLLGIAWFSGFK-ILQEG 292 (423)
Q Consensus 240 ~~~~~~~~~~~g~~~g~~~~~~l~~~~g--w~~~~~~~~~~~~~~~~~~~-~~~~~ 292 (423)
.+|+++.+..+..++..+..|.+.+..| -.+++.+.++..++..+..+ .+|++
T Consensus 419 ~mgilN~~I~lpQii~sl~~g~~~~~~g~~~~~~~~~~gv~~~~aa~~~~~~~~~~ 474 (477)
T TIGR01301 419 SMGVLNLAIVIPQIIVSLGSGPWDQLFGGGNLPAFVVGAVAAFVSGLLALILLPRP 474 (477)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHcCCCCeeHHHHHHHHHHHHHHHHHHhCCCC
Confidence 9999999999999999988888665544 56677888888777655554 44544
No 240
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=98.46 E-value=0.00025 Score=68.33 Aligned_cols=279 Identities=10% Similarity=0.015 Sum_probs=157.4
Q ss_pred hHHHHHHHHHHHHHHHhhhhhhhhhHHHh-hhhhCCCcchhhHHHHHHHH-HHHhhhhhhhhHhhHhcCchHHHHHHHHH
Q 014481 112 RYKLIGTTSLAFVICNMDKVNLSVAIIPM-SHRFGWNSSVAGLVQSSFFW-GYALSQLPGGWLAKIFGGRKVLQTGVLIW 189 (423)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~s~~~~~~~~~~~~~-~~~~~~~~~g~l~dr~G~r~~~~~~~~~~ 189 (423)
.++.++.+.+.+++..+..+..-..-..+ .... .++.+..+-....+ ...+...+..++++++++.+++-+....+
T Consensus 22 E~~k~~~l~~m~f~i~f~y~~lR~~KD~lvvt~~--gae~I~flK~~~vlP~a~~f~~~y~kl~n~~s~~~lFy~~~~~F 99 (491)
T PF03219_consen 22 ELKKFLPLALMFFFILFNYTILRDLKDTLVVTAQ--GAEVIPFLKVWGVLPVAILFTILYSKLSNRLSREKLFYIIIIPF 99 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCeEEEecC--ChhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHH
Confidence 44555566666666555544433222211 1111 45556666554444 44455777999999999999887766555
Q ss_pred HHHHHHHHHh--h-------h---------------------HHHHHHHHHHHHHhhcccchH-hHHHHHHhcCCCCchh
Q 014481 190 SLATALLPLL--A-------G---------------------FMPGLVLSRVLVGIGEGVSPS-AATDLIARSIPLEERS 238 (423)
Q Consensus 190 ~~~~~~~~~~--~-------~---------------------~~~~~~~~~~l~G~~~~~~~~-~~~~~i~~~~~~~~r~ 238 (423)
.....+++++ + + +.|.+.+..+..-+-.....+ .-..+.+|.++.++-.
T Consensus 100 ~~fF~~f~~vlyP~~~~lhp~~~~~~~~~~~~~~~~~~i~~~~~Wt~slfYv~aElwgsvvlSlLFW~fAN~itt~~eAK 179 (491)
T PF03219_consen 100 LGFFALFAFVLYPNRDILHPDAFADKLLAILPPGFKGFIAMFRNWTFSLFYVMAELWGSVVLSLLFWGFANEITTVEEAK 179 (491)
T ss_pred HHHHHHHHHHHhhchhhcCCCHHHHHhhhhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHH
Confidence 5554444332 0 0 112333333333333334344 4688999999999999
Q ss_pred hHHHHHHhhhhhHHHHHHhhHHHhhh---------ccCchHHHHHHH-HH---HHHHHHHHHhhccCCcCcCCCCCcchh
Q 014481 239 RAVSFVFGGLSFGSVAGLLLAPPIIE---------NLGWESVFYIFG-LL---GIAWFSGFKILQEGETSNGATLAPRSN 305 (423)
Q Consensus 239 ~~~~~~~~~~~~g~~~g~~~~~~l~~---------~~gw~~~~~~~~-~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (423)
+.++++..+.++|.+++..+..++.+ ...|...+.... ++ +++.......+.+....++... +...
T Consensus 180 RfYpl~g~ganigli~sG~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~v~~~g~~i~~~~~~~~~~vl~~~~~~-~~~~ 258 (491)
T PF03219_consen 180 RFYPLFGLGANIGLIFSGQLTSYFSSFLRKSLPAGVDAWELSLNSLMGIVLILGIVIILLYRYMNKNVLTDPRFY-PSAK 258 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccccccHhHHHHHHHHHHHHHHHHHHHHHHHHHHHccCccccc-hhhh
Confidence 99999999999999999999888877 123554332222 22 2222222233322211111100 0000
Q ss_pred hhhhhhhhhhhHHhhccccCCCcHHHhhhcHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHhhCCChhhH---HHHHHHHH
Q 014481 306 YINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEA---AWVSILPP 382 (423)
Q Consensus 306 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~---~~~~~~~~ 382 (423)
.... +..+..-...++.++++|.+..+++...++......+....-..+++.+.-+...+ |......+
T Consensus 259 ~~kk---------~k~k~s~~es~k~l~kS~yL~~Ia~lvi~Ygi~inLvE~~wK~~lk~~~~~~~~ysafmG~~~~~tG 329 (491)
T PF03219_consen 259 KKKK---------KKPKMSLKESFKLLLKSKYLLCIALLVIAYGISINLVEVVWKSQLKQLYPDPNDYSAFMGKFSSWTG 329 (491)
T ss_pred cccc---------cCCCccHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCchHHHHHHHHHHHHHH
Confidence 0000 00000001135678899999988888888888887777766666665543332222 34455566
Q ss_pred HHHHHHHHHHHHHhHHhhhc
Q 014481 383 LASVLVTSIAAQFADNLIAT 402 (423)
Q Consensus 383 ~~~~~~~~~~g~l~dr~~~r 402 (423)
+..++..++++.+.+|+|-+
T Consensus 330 ivtii~~~l~~~iir~~GW~ 349 (491)
T PF03219_consen 330 IVTIIMMFLSSNIIRRFGWR 349 (491)
T ss_pred HHHHHHHHHHHHHHHHhhHH
Confidence 66677777888888888865
No 241
>PF12832 MFS_1_like: MFS_1 like family
Probab=98.45 E-value=1.3e-06 Score=61.07 Aligned_cols=71 Identities=21% Similarity=0.159 Sum_probs=61.4
Q ss_pred HHHHHHHHHhhhhhhhhhHHHhhhhhCCCcchhhHHHHHHHHHHHhhhhhhhhHhhHhcCchHHHHHHHHH
Q 014481 119 TSLAFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIW 189 (423)
Q Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~ 189 (423)
+-..+++.+.......|+++...++.|+++.++|.+.++..+...++++++|.++||+++++.++....++
T Consensus 5 lk~~yf~~f~~~g~~~Pfl~~~~~~~Gl~~~~iGil~~i~~~~~~~~~pl~g~laDk~~~~~~~l~~~~~~ 75 (77)
T PF12832_consen 5 LKAFYFFYFAALGCLYPFLPLYLKQLGLSPSQIGILSAIRPLIRFLAPPLWGFLADKFGKRKVILLGSLFM 75 (77)
T ss_pred HHHHHHHHHHHHHHHHhhhhHhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCccHHHHHHHHHH
Confidence 34456666677788888999999999999999999999999999999999999999999999887765543
No 242
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=98.44 E-value=2.9e-07 Score=78.58 Aligned_cols=248 Identities=16% Similarity=0.093 Sum_probs=137.9
Q ss_pred hhhhhhhhhHHHhhhhhCCCcchhhHHHHHHHHHHHhhhhhhhhHhhHhcCchHHHHHHHHHHHHHHHHHHhhhHHHHHH
Q 014481 128 MDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPLLAGFMPGLV 207 (423)
Q Consensus 128 ~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (423)
.+....+|+.-.+.+.+|....++|.+.....-..++...+.|.++|+-|||+.-+.-++.+.+.++ . -.++.+-.++
T Consensus 51 AgDWLQgPYvYyLYstYgFgkG~IgqLfiaGfgSsmLFGtivgSLaDkqGRKracvtycitYiLsCi-T-KhSpqYkVLm 128 (454)
T KOG4332|consen 51 AGDWLQGPYVYYLYSTYGFGKGDIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCITYILSCI-T-KHSPQYKVLM 128 (454)
T ss_pred hhhhhcCceeeeeehhcCccCCccceeeecccchHHHHHHHHHHHHhhhccccceeeehHHHHHHHH-h-hcCCceEEEe
Confidence 3444556666677788999999999988888888888889999999999999987666555554442 2 2455667899
Q ss_pred HHHHHHHhhcccchHhHHHH-HHhcCCCCchhhHHHHH--------HhhhhhHHHHHHhhHHHhhhccC--chHHHHHHH
Q 014481 208 LSRVLVGIGEGVSPSAATDL-IARSIPLEERSRAVSFV--------FGGLSFGSVAGLLLAPPIIENLG--WESVFYIFG 276 (423)
Q Consensus 208 ~~~~l~G~~~~~~~~~~~~~-i~~~~~~~~r~~~~~~~--------~~~~~~g~~~g~~~~~~l~~~~g--w~~~~~~~~ 276 (423)
++|++-|+..+..+.+.-++ +.|.. ++|+.-.-+. ..+..+-.+++.+.+..+.+.++ --.+|-..+
T Consensus 129 VGR~LGGiaTsLLFSaFEsWliaEHn--ekr~FeqqWls~TFskA~ffgNglvAiiaGlfgn~lvd~~slGPVAPFdAAa 206 (454)
T KOG4332|consen 129 VGRVLGGIATSLLFSAFESWLIAEHN--EKRGFEQQWLSVTFSKAVFFGNGLVAIIAGLFGNLLVDTFSLGPVAPFDAAA 206 (454)
T ss_pred ehhhhhhHHHHHHHHHHHHHHHHHhh--hccCChHhhhhHHHHHHHHhhccHHHHHHHHHHHHHHHHhccCCCCchHHHH
Confidence 99999999998887776654 44544 2343322221 12333444455555556666544 344444333
Q ss_pred HHHHHH-HHHHHhhccCCcCcCCCCCcchhhhhhhhhhhhhHHhhccccCCCcHHHhhhcHHHHHHHHHHHHHHHHHHHH
Q 014481 277 LLGIAW-FSGFKILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTC 355 (423)
Q Consensus 277 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 355 (423)
.+..+. +++.--.-|...... +.++-. .+.. ...+.+..|+++.++.....+.-...+.+
T Consensus 207 cfLaigmAvil~~W~ENygdps---~~kdll----tqf~------------gaa~aiaSD~ki~LLG~iqsLFE~smytF 267 (454)
T KOG4332|consen 207 CFLAIGMAVILSSWSENYGDPS---ENKDLL----TQFK------------GAARAIASDEKIALLGAIQSLFEGSMYTF 267 (454)
T ss_pred HHHHHHHHHHHhhhhhccCChh---hhHHHH----HHhh------------HhHHHHhcchHHHHHHHHHHHHhhhhhee
Confidence 332222 222211222211100 000000 0000 01234455666655554444444444443
Q ss_pred Hh-hhhHHHHHhhCCChhhHHHHHHHHHHHHHHHHHHHHHHhHHhhh
Q 014481 356 LS-WLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIA 401 (423)
Q Consensus 356 ~~-~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~ 401 (423)
.. |.|..--+..+. --|++++.+.++.++|.-+..++..|-..
T Consensus 268 VFLWTPaLspn~e~i---PhGfiFatFMlASmLGSSla~Rl~s~s~~ 311 (454)
T KOG4332|consen 268 VFLWTPALSPNDEEI---PHGFIFATFMLASMLGSSLASRLLSRSSP 311 (454)
T ss_pred eeeecccCCCCcccC---CchhHHHHHHHHHHHhhHHHHHHHhcCCc
Confidence 32 333322111122 23677788888888888777777665433
No 243
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=98.43 E-value=1.1e-06 Score=61.86 Aligned_cols=78 Identities=23% Similarity=0.299 Sum_probs=68.5
Q ss_pred HHhhhhhhhhhHHHhhhhhCCCcchhhHHHHHHHHHHHhhhhhhhhHhhHhcCchHHHHHHHHHHHHHHHHHHhhhHHH
Q 014481 126 CNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPLLAGFMP 204 (423)
Q Consensus 126 ~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (423)
.++++..+.+.+|.++++.++|.++.|++.+.+.+||.+|.+...++.++..+++.+..+.+...+..+.++ .+++.+
T Consensus 4 mGigRFayTplLP~M~~~~~ls~~~ag~lasaNy~GYL~GAl~~~~~~~~~~~~~~~~~~l~~~~~~~~~ma-~~~~~~ 81 (85)
T PF06779_consen 4 MGIGRFAYTPLLPLMQADGGLSLSQAGWLASANYLGYLVGALLASRLPRHSRPRRLLRAGLLLTVLSTAAMA-LTHSFW 81 (85)
T ss_pred hhhHHHHHHhHhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHH-HHhchH
Confidence 457788999999999999999999999999999999999999999999998888999999888888877774 444433
No 244
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=98.43 E-value=5.1e-06 Score=81.19 Aligned_cols=181 Identities=15% Similarity=0.135 Sum_probs=127.5
Q ss_pred HHHHHHHHHHHHHHhhhhhhhhhHHHhh-hhhCCCc---chhhHHHHHHHHHHHhhhhhhhhHhhHhcCchHH-HHHHHH
Q 014481 114 KLIGTTSLAFVICNMDKVNLSVAIIPMS-HRFGWNS---SVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVL-QTGVLI 188 (423)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~s~---~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~-~~~~~~ 188 (423)
+.+....+..++.++.......+.|... .-|+-+. ...++....+.++..++..+.|.+..+++|-|.. +++.++
T Consensus 310 r~~~~~lvi~fi~G~~~~s~~~l~p~~~~~vf~~d~~~~~~~~~~s~~~~fg~~~g~~i~g~l~~~ir~~Kw~li~~~~~ 389 (599)
T PF06609_consen 310 RGFAALLVISFISGMNFFSVNILWPQQVVNVFGSDPISITEIGWISSPVGFGSCAGAVILGLLFSKIRHIKWQLIFGSVL 389 (599)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCcccceeehhhhhHHHHHHHHHHHHHHHHHHccchhHHHHHHHHH
Confidence 4455555555555555555556666643 3455443 3578888889999999999999999998875554 566655
Q ss_pred HHHHHHHHHHh-hhHHHHHHHHHHHHHhhcccchHhHHHHHHhcCCCCchhhHHHHHHhhhhhHHHHHHhhHHHhhh---
Q 014481 189 WSLATALLPLL-AGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIE--- 264 (423)
Q Consensus 189 ~~~~~~~~~~~-~~~~~~~~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~--- 264 (423)
+.++..+++.. .++....+..-++.|++.|...........-..|+++-+.+.|+....-.+|+.+|..+...+..
T Consensus 390 ~ta~~Gama~~~~~n~~~~i~~~~l~g~giG~~~~~~~~~~ql~~p~~~ig~a~gL~~s~R~~GGsIg~aIy~~I~~n~~ 469 (599)
T PF06609_consen 390 MTAFCGAMAAVRPDNKNAAIAFLVLAGFGIGGILVPAIVIAQLIVPDEDIGTATGLTGSIRSIGGSIGYAIYNAIFTNKL 469 (599)
T ss_pred HHHHHHHHHHccCCCcchHHHHHHHHHHhHHHHHHHHHHeeEeeeCchHHHHHHHHHHHHHHHhhHHHHHHHHHHHHhhh
Confidence 55443333222 23444566778899999988888877777777898999999999999999999888876544321
Q ss_pred -----------------------------------------------------------ccCchHHHHHHHHHHHHHHHH
Q 014481 265 -----------------------------------------------------------NLGWESVFYIFGLLGIAWFSG 285 (423)
Q Consensus 265 -----------------------------------------------------------~~gw~~~~~~~~~~~~~~~~~ 285 (423)
..++|++|+....+.++.++.
T Consensus 470 ~~~l~~~v~~a~~~aglp~~sl~~li~a~~~~~~~a~~~iPGit~~i~~a~~~A~~~aYa~ay~~V~~~siaFG~vaiia 549 (599)
T PF06609_consen 470 PKELPKYVAPAALAAGLPESSLPALIEALAAGNLEALAAIPGITPEIIAAVVAAFQEAYAHAYRYVYYSSIAFGVVAIIA 549 (599)
T ss_pred hHhHHHHHHHHHHhcCCChhhHHHHHHHHhccChhHHhhCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 015778888888888888888
Q ss_pred HHhhccCCc
Q 014481 286 FKILQEGET 294 (423)
Q Consensus 286 ~~~~~~~~~ 294 (423)
.+++++..+
T Consensus 550 a~fl~d~~~ 558 (599)
T PF06609_consen 550 ALFLGDIDK 558 (599)
T ss_pred HHHcCChHH
Confidence 888876544
No 245
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=98.36 E-value=0.00012 Score=68.06 Aligned_cols=133 Identities=15% Similarity=0.094 Sum_probs=98.1
Q ss_pred hhHHHHHHHHHHHhhhhhhhhHhhHhcCchHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhhcccchHhHHHHHHh
Q 014481 151 AGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIAR 230 (423)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~i~~ 230 (423)
.+.+.-+-.+...+..+++-++.+|+..+.-+.+..++..++.++. +++++.+.-+++-++.+++.|.......++..
T Consensus 61 t~~Vlladi~P~l~~Kl~aP~fi~~v~y~~Ri~~~~~l~~~g~l~v-a~~~~v~~~l~Gv~las~ssg~GE~tfL~lt~- 138 (402)
T PF02487_consen 61 TGAVLLADILPSLLVKLIAPFFIHRVPYWIRILICVALSAAGMLLV-AFSPSVWVRLLGVVLASLSSGLGEVTFLSLTH- 138 (402)
T ss_pred chHHHHHHHHHHHHHHHHhHhhhhhccchHHHHHHHHHHHHHHhhe-eeccchhHHHHHHHHHhhhhhhhHHHHHHHHH-
Confidence 3456666777888888888899999887666666666777777666 56677788888999999998888777777644
Q ss_pred cCCCCchhhHHHHHHhhhhhHHHHHHhhHHHhhhccCc--hHHHHHHHHHHHHHHHHHHhhc
Q 014481 231 SIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGW--ESVFYIFGLLGIAWFSGFKILQ 290 (423)
Q Consensus 231 ~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw--~~~~~~~~~~~~~~~~~~~~~~ 290 (423)
.+++ ...+-+..+.+.++++|+..-..+.+ .|+ |.++.+...+.++.++.++++.
T Consensus 139 ~y~~----~~l~~wssGTG~aGl~Ga~~y~~lT~-~g~s~~~tll~~~~lp~~~~~~~f~~L 195 (402)
T PF02487_consen 139 FYGK----SSLSAWSSGTGGAGLVGALYYLGLTT-LGLSPRTTLLIMLVLPAIFLLSYFFLL 195 (402)
T ss_pred hcCc----cccccccCCcChhhHHHHHHHHHHHH-hCcCHHHHHHHHHHHHHHHHHHHHHhh
Confidence 5553 45788999999999999988776666 554 6677777766655555544443
No 246
>PTZ00207 hypothetical protein; Provisional
Probab=98.28 E-value=1.3e-05 Score=78.89 Aligned_cols=171 Identities=11% Similarity=0.015 Sum_probs=118.5
Q ss_pred HHHHHHHHHHHHhhhhhhhhhHHHhhhhh-CCCc-chhhH-HHHHHHHHHHhhhhhhhhHhhHhcC--------chH-HH
Q 014481 116 IGTTSLAFVICNMDKVNLSVAIIPMSHRF-GWNS-SVAGL-VQSSFFWGYALSQLPGGWLAKIFGG--------RKV-LQ 183 (423)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~s~-~~~~~-~~~~~~~~~~~~~~~~g~l~dr~G~--------r~~-~~ 183 (423)
++++++.+++.......+..-+.++.+.+ |.+. .+... +.+++.++..+|.+..|.+....-+ |.. +.
T Consensus 355 ~Wll~~~~~cg~g~gl~~~~N~~qI~~sl~g~~~~~~~~~~~vsL~si~~~~GRl~~g~~~~~~~~~~~~~r~prt~~l~ 434 (591)
T PTZ00207 355 LWCLLWSIFCCVGAHFVIIFNARFIYTALAGEAPDDALNTLLTVLNGVGSAVGRLCMSYFEIWSQKRRAEDRVPITIALF 434 (591)
T ss_pred HHHHHHHHHHhhCchheeeecHHHHHHHhcCCCCCccceeeehhhhhHHHHhhHHHHHHHHHHHHhhccccccchhHHHH
Confidence 44555555555555555555567788888 6522 32222 7788889999999988887722211 122 23
Q ss_pred HHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhhcccchHhHHHHHHhcCCCCchhhHHHHHHhhhhhHHHHH-HhhHHHh
Q 014481 184 TGVLIWSLATALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAG-LLLAPPI 262 (423)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g-~~~~~~l 262 (423)
+..+ +.++.+++....+ ...+++.-++.|++.|..++.....++|+|. ++-|+-..+......+|..+- -.+.|.+
T Consensus 435 ~~~~-~~~~~lll~~~~p-~~~L~~~~~lvg~~~G~~~~~~~~i~selFg-k~~g~~yN~~~~a~pigs~~~n~~l~G~~ 511 (591)
T PTZ00207 435 IPSV-CIITMLTLFLTLP-KAALPLPYFIAAFANGFMAATIALVTRTIFA-KDPAKHYNFCFLGSVLSAIFLNRLLYGEW 511 (591)
T ss_pred HHHH-HHHHHHHHHHHCC-ccHhHHHHHHHHHHhhHhHHHHHHHHHHHhc-cchHHHhhHHhHHHHHHHHHHHHHHHHHH
Confidence 3333 4555545433223 2578899999999999999999999999999 999999999999999998887 5677777
Q ss_pred hhcc----------C---chHHHHHHHHHHHHHHHHHHhh
Q 014481 263 IENL----------G---WESVFYIFGLLGIAWFSGFKIL 289 (423)
Q Consensus 263 ~~~~----------g---w~~~~~~~~~~~~~~~~~~~~~ 289 (423)
.|+. | ++.+|++++.+++..++....+
T Consensus 512 Yd~ea~k~~~~~C~G~~C~~~~~~v~~~~~~~g~~~s~~l 551 (591)
T PTZ00207 512 YTQQADKLGQDVCTERVCVVMPLAFLLGLSFLAFITSTYV 551 (591)
T ss_pred HHHHHhhCCCCeeCCceeeHhHHHHHHHHHHHHHHHHhhe
Confidence 7532 2 6788999988887776655444
No 247
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.23 E-value=6.5e-06 Score=79.26 Aligned_cols=163 Identities=17% Similarity=0.240 Sum_probs=106.8
Q ss_pred HHHHHHHHHHHHHhhhhhhhhhHHHhhhh-hCCCcchhhHHHHHHHHHHHhhhhhhhhHhhH----hcCchHHHHHHHHH
Q 014481 115 LIGTTSLAFVICNMDKVNLSVAIIPMSHR-FGWNSSVAGLVQSSFFWGYALSQLPGGWLAKI----FGGRKVLQTGVLIW 189 (423)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr----~G~r~~~~~~~~~~ 189 (423)
.++..+++.++.....+.....+|.+.++ .|.+..+.+.+...+.++.+++.+++|+++|| ..+|..+.....++
T Consensus 274 ~vw~~~l~~~~~~lv~~~~~~~lpl~l~~~~~~s~~~a~~ls~~~~~~g~v~~i~ag~lsdr~~~~~~~~~~~~~~~~~~ 353 (495)
T KOG2533|consen 274 GVWPFSLCYFFLKLVNYGFSYWLPLYLKSNGGYSELQANLLSTPYDVGGIVGLILAGYLSDRLKTIFARRLLFIVFLCLY 353 (495)
T ss_pred hHHHHHHHHHHHhhccccHHHHHHHHHHcCCCcChHHhccccchHHhhhHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHH
Confidence 35567777888888888888999997777 56899999999999999999999999999999 66777776666665
Q ss_pred HHHH-HHHHHhhhHHHHHHHHHHHHHhhcccchHhHHHHHHhcCCCCch-hhHHHHHHhhhhhHH-HHHHhhHHHhhhcc
Q 014481 190 SLAT-ALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEER-SRAVSFVFGGLSFGS-VAGLLLAPPIIENL 266 (423)
Q Consensus 190 ~~~~-~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r-~~~~~~~~~~~~~g~-~~g~~~~~~l~~~~ 266 (423)
.+.. ..+ ....+........+....+.....+.......+...++.| -...+....+.+.++ +.++...+....++
T Consensus 354 ~~~g~~~l-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~s~~~~g~~k~~~~~~~~i~~~~s~~~~~~~~~~~~~ap~y 432 (495)
T KOG2533|consen 354 AIIGAISL-LAAAVLPGAYGAFLIGPYGLIATAIIALSWTSANLAGNTKALTTVSAIIDGTGSAGAISGQLFRSLDAPRY 432 (495)
T ss_pred HHHHHHHH-HhhccchHHhHHHHhcchhhHHHHHHHHhhccccccchHHhHHHHhhhhcchhHHHHhhhhhcccccCcch
Confidence 5544 333 2223223333333333444455556666677776654443 334444444444444 44444455555667
Q ss_pred CchHHHHHHHHH
Q 014481 267 GWESVFYIFGLL 278 (423)
Q Consensus 267 gw~~~~~~~~~~ 278 (423)
+|.+.|+.....
T Consensus 433 ~~~~~f~~~~~~ 444 (495)
T KOG2533|consen 433 GWGAVFYMLVAA 444 (495)
T ss_pred hhhhHHHHHHHH
Confidence 888888544333
No 248
>COG3202 ATP/ADP translocase [Energy production and conversion]
Probab=98.22 E-value=0.0021 Score=60.48 Aligned_cols=277 Identities=12% Similarity=0.010 Sum_probs=155.1
Q ss_pred hHHHHHHHHHHHHHHHhhhhhhhhhHHHhhhhhC---CCcchhhHHHHHHHH-HHHhhhhhhhhHhhHhcCchHHHHHHH
Q 014481 112 RYKLIGTTSLAFVICNMDKVNLSVAIIPMSHRFG---WNSSVAGLVQSSFFW-GYALSQLPGGWLAKIFGGRKVLQTGVL 187 (423)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~s~~~~~~~~~~~~~-~~~~~~~~~g~l~dr~G~r~~~~~~~~ 187 (423)
.+..++.+.+..++..+..+..- .+.+.+. ..+..+.++-+...+ +..+..++.+++.+++.+.+++-+...
T Consensus 25 E~~kflpl~Ll~f~I~~ny~~lR----~lKDslvv~~~gae~I~FlK~~~vlP~avif~~iy~kl~~~lt~~~vF~~~~~ 100 (509)
T COG3202 25 ELKKFLPLALLFFCILFNYNLLR----SLKDSLVVTRQGAESISFLKTWGVLPSAVIFTIIYQKLLNILTREKVFYIILG 100 (509)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH----HhhhheEeecCcchhhHHHHHHHhchHHHHHHHHHHHHHhhcCHHHHHHHHHH
Confidence 44555555555555554444433 3444443 346667888888877 677888999999999999999877766
Q ss_pred HHHHHHHHHHHhh--------------h--------H---------HHHHHHHHHHHHhhcccchH-hHHHHHHhcCCCC
Q 014481 188 IWSLATALLPLLA--------------G--------F---------MPGLVLSRVLVGIGEGVSPS-AATDLIARSIPLE 235 (423)
Q Consensus 188 ~~~~~~~~~~~~~--------------~--------~---------~~~~~~~~~l~G~~~~~~~~-~~~~~i~~~~~~~ 235 (423)
.+....+++++.- . + .|...+..+..-+-.+.... .-.....|.+..+
T Consensus 101 ~F~~fF~LFa~Vi~P~~~~~hp~~~~~~~~~~~~p~~l~~~ili~~~Ws~s~~Yi~aELWgslV~S~lFw~faNeitt~~ 180 (509)
T COG3202 101 FFLGFFALFAFVIYPYKDILHPDPEFSRDLFADLPMFLKWFILIVGEWSYSLFYIMAELWGSLVLSLLFWQFANEITTIE 180 (509)
T ss_pred HHHHHHHHHHHHHhccccccCCCHHHHHHHHhhCCccceeeeEeecchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHH
Confidence 6655555554321 1 0 02222222333333233333 4567788999989
Q ss_pred chhhHHHHHHhhhhhHHHHHHhhHHHhhhcc-C---------chHHHHHHHHHHHHHHHHHHhhccCCcCcCCCCCcchh
Q 014481 236 ERSRAVSFVFGGLSFGSVAGLLLAPPIIENL-G---------WESVFYIFGLLGIAWFSGFKILQEGETSNGATLAPRSN 305 (423)
Q Consensus 236 ~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~-g---------w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (423)
+-.|.+++++.+.+++..++..+..++.++. . .+..+.+.++..++++.+..++.+.-...+.... +..
T Consensus 181 eakRFy~lf~l~~ni~lllsg~~~~~~~k~~~~~~~~~~~~~~~~~~~vi~~~~~i~~~l~~~~~r~il~~~~f~~-~~~ 259 (509)
T COG3202 181 EAKRFYPLFGLGANISLLLSGEVTSWLSKHRDALASEFKDLLLQILFIVIVILGIIAILLYRYINRNVLTDPLFYL-RAK 259 (509)
T ss_pred HhhhhHHHHHHHHHHHHHHHHHHHHHHhhchhhHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCcchhH-HHh
Confidence 9999999999999999999999988887632 1 2333444444444444444444332211111000 000
Q ss_pred hhhhhhhhhhhHHhhccccCCCcHHHhhhcHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHhhCCChhhH---HHHHHHHH
Q 014481 306 YINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEA---AWVSILPP 382 (423)
Q Consensus 306 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~---~~~~~~~~ 382 (423)
....++ ..+-.-...++.+.++|.++.+++...+++.+.+.+....-.-.++.+....... +.+....+
T Consensus 260 ~kk~~~--------k~k~~~~~s~k~i~~SkyL~~ial~vl~Y~v~inLvE~~wKs~ik~~~~~~~~~~~f~~~~~~~tg 331 (509)
T COG3202 260 KKKKKK--------KLKLGLIESFKMILRSKYLGAIALLVLAYGVSINLVEGVWKSGIKELYPTTNEYTAFMGRFQIWTG 331 (509)
T ss_pred cccccc--------cccCcHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHhHHHhcCChhHHHHHHHHHHHHHH
Confidence 000000 0000000124667888888888888888887777666544333443333333333 23344444
Q ss_pred HH-HHHHHHHHHHHhHHhhh
Q 014481 383 LA-SVLVTSIAAQFADNLIA 401 (423)
Q Consensus 383 ~~-~~~~~~~~g~l~dr~~~ 401 (423)
+. .++...+++.+.+|.|-
T Consensus 332 vv~~v~~~~~~s~~ir~~GW 351 (509)
T COG3202 332 VVSLVVFLFPGSNLIRRVGW 351 (509)
T ss_pred HHHHHHHHhhhHHHHHHhhH
Confidence 44 44455566777777663
No 249
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=98.16 E-value=3.4e-05 Score=69.80 Aligned_cols=133 Identities=21% Similarity=0.148 Sum_probs=105.9
Q ss_pred hhhhhhHHHh-hhhhCCCcchhhHHHHHHHHHHHhhhhhhhhHhhHhc--CchHHHHHHHHHHHHHHHHHHhhhHHHHHH
Q 014481 131 VNLSVAIIPM-SHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFG--GRKVLQTGVLIWSLATALLPLLAGFMPGLV 207 (423)
Q Consensus 131 ~~~~~~~~~~-~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G--~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (423)
..+....+.+ ...+|.++.+.|-+.+...+...+.+....+..||.. -+-.+..+..++.-..++.. .......+.
T Consensus 278 s~~~~t~~~l~~~rfg~ss~~~G~vl~~tGl~m~~~ql~~~~~l~~~~~~~~a~l~~~l~~~vP~~llls-~~~~~~~l~ 356 (451)
T KOG2615|consen 278 SGLENTVLFLTHGRFGYSSMQQGKVLSTTGLLMLVIQLALVPILPRYKGNIKAVLLFSLLLIVPAFLLLS-LARTPVVLY 356 (451)
T ss_pred HHHHhhHHHhhcCccCCChhhheeeeehhhHHHHHHHHhccccccccccchhhHHHHHHHHHHHHHHHHh-ccccchhhh
Confidence 3333333433 3679999999999999999999999999999999987 66666666665544444443 334436677
Q ss_pred HHHHHHHhhcccchHhHHHHHHhcCCCCchhhHHHHHHhhhhhHHHHHHhhHHHhhh
Q 014481 208 LSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIE 264 (423)
Q Consensus 208 ~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~ 264 (423)
.+-.+-.+..+...+....++....|+++||.++|+......++-.+||+++|.+..
T Consensus 357 ~~s~l~sf~~A~~vt~Lt~Lv~~~~~~~qrG~~~Gi~~Sl~alaRaiGPlv~g~i~~ 413 (451)
T KOG2615|consen 357 LGSTLKSFSTASVVTCLTSLVHKYGPQSQRGTLNGIFRSLGALARAIGPLVSGVIFS 413 (451)
T ss_pred HHHHHHHHHHHHhhHHHHHHHHhcCCcccchHHHHHHHHHHHHHHHhhhhhhheeEE
Confidence 777888888888889999999999999999999999999999999999999988764
No 250
>PF12832 MFS_1_like: MFS_1 like family
Probab=98.11 E-value=1.7e-05 Score=55.53 Aligned_cols=64 Identities=20% Similarity=0.227 Sum_probs=56.8
Q ss_pred HHHHHHHHHHHHHHHHHhhhhHHHHHhhCCChhhHHHHHHHHHHHHHHHHHHHHHHhHHhhhcCC
Q 014481 340 AMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGV 404 (423)
Q Consensus 340 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~r~~ 404 (423)
.+-..+++.+.+...+..++|.|+++ .|+++.+.|.+.++..+..+++.+++|+++||+++++.
T Consensus 4 ~lk~~yf~~f~~~g~~~Pfl~~~~~~-~Gl~~~~iGil~~i~~~~~~~~~pl~g~laDk~~~~~~ 67 (77)
T PF12832_consen 4 PLKAFYFFYFAALGCLYPFLPLYLKQ-LGLSPSQIGILSAIRPLIRFLAPPLWGFLADKFGKRKV 67 (77)
T ss_pred HHHHHHHHHHHHHHHHHhhhhHhhhh-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCccHH
Confidence 34556777788888899999999986 69999999999999999999999999999999998743
No 251
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=98.07 E-value=3.3e-05 Score=76.31 Aligned_cols=157 Identities=17% Similarity=0.069 Sum_probs=106.1
Q ss_pred HHHhhhhhCCCcchhhHHHHHHHHHHHhhhhhhhhHhhHhcCchHHHHHHHHHHHHHHHHHHhhhHHH--HHHHHHHHHH
Q 014481 137 IIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPLLAGFMP--GLVLSRVLVG 214 (423)
Q Consensus 137 ~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~G 214 (423)
++.....+|.+.. .................+.+.|++|||.....+..+..++.++.+....... ...+...+..
T Consensus 341 l~~~~~~lg~~~~---~~~~~~~~~~~p~~~~~~~~~~~~gR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 417 (521)
T KOG0255|consen 341 LSLNVSGLGGNIY---LNFTLSGLVELPAYFRNGLLLPEFGRRPPLFLSLFLAGIGLLLFGWLPDDLGGWLHWILPLLGK 417 (521)
T ss_pred hhhhhhhcCchHH---HHHHHHHHHHhhHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHH
Confidence 3334444554432 3333333344455555689999999999999999998888887765554322 3455555555
Q ss_pred hhcccchHhHHHHHHhcCCCCchhhHHHHHHhhhhhHHHHHHhhHHHhhhccCchHHHHHHHHHHHHH-HHHHHhhccCC
Q 014481 215 IGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAW-FSGFKILQEGE 293 (423)
Q Consensus 215 ~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~~~~~~~~~~~~-~~~~~~~~~~~ 293 (423)
++.+..+.....+.+|.+|...|..+.+.......+|.+++|.+...... ......+.+.+....+. ++...++||+.
T Consensus 418 ~~~~~~~~~~~~~~~el~pt~~r~~~~~~~~~~~~~~~i~ap~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~lpet~ 496 (521)
T KOG0255|consen 418 FFIGSAFNLIFLYSAELIPTVVRNTAVGAISAAARLGSILAPLFPLLLRQ-MFPLLGLILFGWLALLLGLLSLLLLPETK 496 (521)
T ss_pred HHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-hcccchHHHHHHHHHHHHHHHHhcCcccC
Confidence 66666667779999999999999999999999999999999998765544 22222233335555444 44447888877
Q ss_pred cCcC
Q 014481 294 TSNG 297 (423)
Q Consensus 294 ~~~~ 297 (423)
....
T Consensus 497 ~~~l 500 (521)
T KOG0255|consen 497 GKPL 500 (521)
T ss_pred CCCC
Confidence 6544
No 252
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=98.06 E-value=0.0003 Score=68.05 Aligned_cols=133 Identities=17% Similarity=0.107 Sum_probs=96.9
Q ss_pred hhhHHHHHHHHHHHhhhhhhhhHhhHhcC--ch-----HHHHHHHHHHHHHHHHHHhh--------hHHHHHHHHHHHHH
Q 014481 150 VAGLVQSSFFWGYALSQLPGGWLAKIFGG--RK-----VLQTGVLIWSLATALLPLLA--------GFMPGLVLSRVLVG 214 (423)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~g~l~dr~G~--r~-----~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~l~G 214 (423)
..+|..++..+..++.+|+.+++-.|.++ |. =+.+|+++.+++.+++.... .+.+++++..++.+
T Consensus 309 p~~~~qslNp~~ii~l~P~~a~lw~~l~~~~~~~s~~~Kfa~g~~~~g~~f~~l~~~~~~~~~~~~~s~~wl~~~~~~~t 388 (493)
T PRK15462 309 PTAMFQSINAFAVMLCGVFLAWVVKESVAGNRTVRIWGKFALGLGLMSAGFCILTLSARWSAMYGHSSLPLMVLGLAVMG 388 (493)
T ss_pred CHHHHHhHhHHHHHHHHHHHHHHHHHHhcCCCCCCcHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCcCHHHHHHHHHHHH
Confidence 35788899999999999988888777633 21 16677777777776553211 24567888889999
Q ss_pred hhcccchHhHHHHHHhcCCCCchhhHHHHHHhh-hhhHHHHHHhhHHHhhhc------------cCchHHHHHHHHHHHH
Q 014481 215 IGEGVSPSAATDLIARSIPLEERSRAVSFVFGG-LSFGSVAGLLLAPPIIEN------------LGWESVFYIFGLLGIA 281 (423)
Q Consensus 215 ~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~-~~~g~~~g~~~~~~l~~~------------~gw~~~~~~~~~~~~~ 281 (423)
+|.-...|...+++++..|++-||+.+|.+... ..+|..++..+++..... ..+...|...++.+++
T Consensus 389 ~gEl~~sPvgls~~~~laP~~~~g~~mg~w~l~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~ 468 (493)
T PRK15462 389 FAELFIDPVAMSQITRIEIPGVTGVLTGIYMLLSGAIANYLAGVIADQTSQASFDASGAINYSINAYIEVFDQITWGALA 468 (493)
T ss_pred HHHHHHChHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCccccccchhhhHHHHHHHHHHHHHH
Confidence 999999999999999999999999999998764 367777776666655311 1244567666666554
Q ss_pred H
Q 014481 282 W 282 (423)
Q Consensus 282 ~ 282 (423)
.
T Consensus 469 ~ 469 (493)
T PRK15462 469 C 469 (493)
T ss_pred H
Confidence 4
No 253
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=98.01 E-value=0.00021 Score=68.53 Aligned_cols=124 Identities=21% Similarity=0.217 Sum_probs=105.6
Q ss_pred HhhhhhCCCcchhhHHHHHHHHHHHhhhhhhh-hHhhHhcCchHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhhc
Q 014481 139 PMSHRFGWNSSVAGLVQSSFFWGYALSQLPGG-WLAKIFGGRKVLQTGVLIWSLATALLPLLAGFMPGLVLSRVLVGIGE 217 (423)
Q Consensus 139 ~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g-~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~ 217 (423)
.+...+++++.+.+...+.......+++++.. .+...+|-|+.+.+|++.-.+..+..+ +.++.|.++...++.++.
T Consensus 267 yl~~~f~w~~~~~s~~~~~~~~~~~i~~l~~~~~l~~~l~~~~~i~lGl~~~~~~~~~~a-f~~~~w~~~~~~v~~~~~- 344 (463)
T KOG2816|consen 267 YLKAKFGWNKKEFSDLLSLVSILGIISQLLLLPLLSSILGEKRLISLGLLSEFLQLLLFA-FATETWMMFAAGVVVALA- 344 (463)
T ss_pred EEeeecCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHhhHHHHHHHHHHHHHH-HhccchhhhHHHHHHHhh-
Confidence 35667899999999999988888888888877 678888999999999988888887774 556658777777777766
Q ss_pred ccchHhHHHHHHhcCCCCchhhHHHHHHhhhhhHHHHHHhhHHHhhh
Q 014481 218 GVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIE 264 (423)
Q Consensus 218 ~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~ 264 (423)
....+...+.++.+..++++|+++++......+..+++|.+-+.+..
T Consensus 345 ~~~~pa~~s~~s~~v~~~e~g~v~~~is~i~~l~~~~~~~~~~~i~~ 391 (463)
T KOG2816|consen 345 GIVFPAIRAFASILVSPEEQGKVFGIISGIEGLSGVVSPALYGNIFA 391 (463)
T ss_pred cchhHHHHhHHHhhcccccccchhhHHHHHHHHhhhhhHHHHHHHHH
Confidence 66779999999999999999999999999999999999999888764
No 254
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=97.98 E-value=4.2e-05 Score=72.09 Aligned_cols=110 Identities=22% Similarity=0.272 Sum_probs=88.4
Q ss_pred hHHHHHHHHHHHHHHHHHHhh--hH------HHHHHHHHHHHHhhcccchHhHHHHHHhcCCCC---chhhHHHHHHhhh
Q 014481 180 KVLQTGVLIWSLATALLPLLA--GF------MPGLVLSRVLVGIGEGVSPSAATDLIARSIPLE---ERSRAVSFVFGGL 248 (423)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~--~~------~~~~~~~~~l~G~~~~~~~~~~~~~i~~~~~~~---~r~~~~~~~~~~~ 248 (423)
|+++++.+++.+|.+++...+ .. .+.++++.++.++|.|+.-|...++.+|.++++ +|...+.+++.+.
T Consensus 2 ktI~~g~~~~~~G~~ll~l~~~~~~~~~~~~~~~~~~gL~lia~G~G~~K~ni~~~~~dq~~~~~~~~~~~~F~~fY~~i 81 (372)
T PF00854_consen 2 KTILLGSIVYLLGHVLLTLSAIPPSLPSGIQLGLFYIGLALIAVGTGGIKPNISPFGADQYDEDDDSRRDSFFNWFYWGI 81 (372)
T ss_dssp HHHHHHHHHHHHHHHH--HHHTSSSC------CHHHHHHHHHHHHHHCCHHHHHHHHHHCSSTTTTTHHHHHHHHHHHHH
T ss_pred HhhhHHHHHHHHHHHHhHHHHhcchhhhhHHHHHHHHHHHHHHhccccccccHHHHHHHHhcccchhhhhhhHHHHHHHH
Confidence 567778888888887743222 22 246888889999999999999999999999765 4678888999999
Q ss_pred hhHHHHHHhhHHHhhhccCchHHHHHHHHHHHHHHHHHHhh
Q 014481 249 SFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAWFSGFKIL 289 (423)
Q Consensus 249 ~~g~~~g~~~~~~l~~~~gw~~~~~~~~~~~~~~~~~~~~~ 289 (423)
++|..+++.+.+++-++.||.+.|.+.++..++.++.++.-
T Consensus 82 n~G~~~~~~~~~~i~~~~~~~~~f~i~~~~~~~~~~~f~~~ 122 (372)
T PF00854_consen 82 NIGSLFSPTLVPYIQQNYGWFLGFGIPAIGMLLALIVFLSG 122 (372)
T ss_dssp HHHHHHHHHCCCHHHHCS-HHHHHHHHHHHHHHHHHHHHCC
T ss_pred hhhhHhhcccchhhccccchhhhhhHHHHHHHHHHHHHHhC
Confidence 99999999999999999999999999988887776655444
No 255
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=97.97 E-value=0.00035 Score=65.74 Aligned_cols=280 Identities=11% Similarity=-0.009 Sum_probs=143.7
Q ss_pred HHHHHHHHHHHhhhhhhhhhHHHhhhh--hCCCcchhhHHHHH---HHHHHHhhhhhhhhHhhHhcCchHHHHHH-HHHH
Q 014481 117 GTTSLAFVICNMDKVNLSVAIIPMSHR--FGWNSSVAGLVQSS---FFWGYALSQLPGGWLAKIFGGRKVLQTGV-LIWS 190 (423)
Q Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~s~~~~~~~~~~---~~~~~~~~~~~~g~l~dr~G~r~~~~~~~-~~~~ 190 (423)
.++.+.+++++.-.+.....+|.+.++ -+.|.++.|....+ |.+=..-++++=...+.|+||||..++-. .+.+
T Consensus 3 ~lL~~LY~lQGiP~GL~~gsiPflL~~~~~~~sy~q~~~fSla~~PfSlKlLWaPiVDs~y~~~~GRRKSWiiP~Q~l~g 82 (544)
T PF13000_consen 3 ALLVLLYFLQGIPLGLAFGSIPFLLQSMAKKVSYSQQAIFSLASYPFSLKLLWAPIVDSVYSKRIGRRKSWIIPIQYLSG 82 (544)
T ss_pred eHHHHHHHHcCcccccccccchhhhccccCCCChhHheeeeeeechhHHHHhhhhhhhhhcccccCCcchhhhHHHHHHH
Confidence 345666777777666665677887777 67787776654322 22222222223333344799999887642 3333
Q ss_pred HHHHHHHHhh----------h-------------HHHHHHHHHHHHHhhcccchHhHHHHHHhcCCCCchhhHHHHHHhh
Q 014481 191 LATALLPLLA----------G-------------FMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGG 247 (423)
Q Consensus 191 ~~~~~~~~~~----------~-------------~~~~~~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~ 247 (423)
+..+.++... + +...+....++.-+-.+....+.-.+.-.+..+++++.+......+
T Consensus 83 ~~m~~l~~~i~~~~~~~~~~d~~~~~~~~~~~~~~i~~Lt~~F~~L~fl~ATQDIAVDGWALT~Ls~~n~~~ASTcqtvG 162 (544)
T PF13000_consen 83 ILMLYLSYNISQWLLFDGVDDALLGQGESTVNNITIKFLTWFFFILVFLCATQDIAVDGWALTMLSPENVGYASTCQTVG 162 (544)
T ss_pred HHHHHHHhccchhhcccccchhhhcCCCCcccccchhHHHHHHHHHHHHHccCCceeehhhhhhcChhhcchHHHHHHhH
Confidence 3333322211 0 0011223332333444555556666666777778888888877777
Q ss_pred hhhHHHHHHhhHHHhhhc-------------cC---chHHHHHHHHHHHHHHHHHHhhccCCcCcCCCCCcc----hhhh
Q 014481 248 LSFGSVAGLLLAPPIIEN-------------LG---WESVFYIFGLLGIAWFSGFKILQEGETSNGATLAPR----SNYI 307 (423)
Q Consensus 248 ~~~g~~~g~~~~~~l~~~-------------~g---w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~ 307 (423)
.++|..++..+--.+-+. .| -.....+.+.+.++..+...++.++++......+.+ .+..
T Consensus 163 ~~~Gyfls~tvFlalns~~f~Nky~r~~p~~~glvtl~~yl~fwg~~~l~~T~~v~~~k~E~~~~~~~~~~~~~~~~~~~ 242 (544)
T PF13000_consen 163 QTAGYFLSFTVFLALNSPDFCNKYLRSTPSDEGLVTLSGYLKFWGWVFLIVTILVAFFKKEKPHSESLPKIEPINKSDGK 242 (544)
T ss_pred hhhhHHHHHHHHHhhCCHHHHHHhcccCCCCCCeeeHHHHHHHHHHHHHHHHHHHheEeecccccccCcccccccccccc
Confidence 777777766554444321 01 122334455555555444444444332211110000 0000
Q ss_pred hhhhh-hhhhH-----Hhhc-cccCCCcHHHhhhcHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHhhCCChhhHHHHHHH
Q 014481 308 NMKKS-LSASL-----EEMG-ESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSIL 380 (423)
Q Consensus 308 ~~~~~-~~~~~-----~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~ 380 (423)
..+.. ..++. ++.. -......+.+++|-|.+..+++.....-.++.........=+.| .|++.++.+.+..+
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~i~~~Y~~l~~ilkLp~V~~li~ilL~~KigF~a~da~T~LKLlE-kG~~KE~LAl~~li 321 (544)
T PF13000_consen 243 SKEISIEYDESDVISTEEILSIKDVYKSLWKILKLPNVQTLIIILLTAKIGFQANDAVTSLKLLE-KGLSKEDLALLVLI 321 (544)
T ss_pred ccccceecccccccchhhhhhHHHHHHHHHHHHcCchHHHHHHHHHHHHhccccchhhhHHHHHH-cCCCHHHhHHHHHH
Confidence 00000 00000 0000 00001123456777888888888888888877777777777776 59999988766544
Q ss_pred HHHHHHHHHHHHHHHhHHhhh
Q 014481 381 PPLASVLVTSIAAQFADNLIA 401 (423)
Q Consensus 381 ~~~~~~~~~~~~g~l~dr~~~ 401 (423)
. +...++.|+++.|+.+
T Consensus 322 ~----~P~qii~~~~~~Kws~ 338 (544)
T PF13000_consen 322 D----FPFQIILPYYIGKWSA 338 (544)
T ss_pred h----hhHHHHHHHHhhhhhc
Confidence 4 4444445555555443
No 256
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=97.83 E-value=0.00053 Score=63.84 Aligned_cols=113 Identities=18% Similarity=0.077 Sum_probs=78.2
Q ss_pred CcchhhHHHHHHHHHHHhhhhhhhhHhhHhcCchHHHHHHHHHHHHHH--HHH--HhhhHHHHHHHHHHHHHhhcccchH
Q 014481 147 NSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATA--LLP--LLAGFMPGLVLSRVLVGIGEGVSPS 222 (423)
Q Consensus 147 s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~--~~~--~~~~~~~~~~~~~~l~G~~~~~~~~ 222 (423)
...+.-+....|.+|-.++.--... +.-|+..+.+.+-..-..+ +-+ .+.++.|.+++..+..|+..|..+.
T Consensus 279 ~r~~Y~~Y~~~YQ~GVFISRSS~~~----~rir~lwils~LQ~~nl~~~~l~s~~~fipsi~ivf~lif~eGLlGGa~YV 354 (402)
T PF02487_consen 279 PRDQYRWYQLLYQLGVFISRSSLPF----FRIRRLWILSLLQVINLVFLLLQSWYRFIPSIWIVFVLIFYEGLLGGASYV 354 (402)
T ss_pred HHHHHHHHHHHHHHHHhhhhcceee----eehhhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhHHHH
Confidence 3556677777777776666433221 2234444444332211111 111 1235667777888999999999999
Q ss_pred hHHHHHHhcCCCCchhhHHHHHHhhhhhHHHHHHhhHHHhh
Q 014481 223 AATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPII 263 (423)
Q Consensus 223 ~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~ 263 (423)
.....+.+-.++++|..++|....+-++|.+++.+++-.+-
T Consensus 355 NtF~~I~~~~~~~~REFslg~vsvsds~GI~lAgll~l~le 395 (402)
T PF02487_consen 355 NTFYRISEEVPPEDREFSLGAVSVSDSLGILLAGLLGLPLE 395 (402)
T ss_pred HHHHHHHhcCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999988876553
No 257
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=97.62 E-value=0.0018 Score=61.26 Aligned_cols=140 Identities=19% Similarity=0.079 Sum_probs=104.4
Q ss_pred chhhHHHHHHHHHHHhhhhhhhhHhhHhcCc-------hHHHHHHHHHHHHHHHHHHh----h-----hHHHHHHHHHHH
Q 014481 149 SVAGLVQSSFFWGYALSQLPGGWLAKIFGGR-------KVLQTGVLIWSLATALLPLL----A-----GFMPGLVLSRVL 212 (423)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r-------~~~~~~~~~~~~~~~~~~~~----~-----~~~~~~~~~~~l 212 (423)
-..++..+...+..++.+|+..++..+.+++ .-+-+++.+.+.+.+++... . .+.++++...++
T Consensus 324 vp~~~fQslNp~~Iii~~pI~a~l~~~l~~~~~~ps~~~KFalGl~l~g~~fl~l~~~~~~~~~~~~~~s~~~lil~y~l 403 (498)
T COG3104 324 VPPAWFQSLNPFFIILFSPILAALWTKLGRGNKQPSTPIKFALGLILAGLGFLILLLAGIWFGGPSGLVSVWWLVLSYVL 403 (498)
T ss_pred cCHHHHHhhCHHHHHHHHHHHHHHHhHhhcCCCCCCcchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCcCHHHHHHHHHH
Confidence 3457888999999999999988888885543 22445555655555544322 1 246788899999
Q ss_pred HHhhcccchHhHHHHHHhcCCCCchhhHHHHHHhhhhhHHHHHHhhHHH------hhhccCchHHHHHHHHHHHHHHHHH
Q 014481 213 VGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPP------IIENLGWESVFYIFGLLGIAWFSGF 286 (423)
Q Consensus 213 ~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~------l~~~~gw~~~~~~~~~~~~~~~~~~ 286 (423)
+++|.=+..|...+++....|++-.+..++.+......|..++..+++. ..+.......|+..+...++..+..
T Consensus 404 ~s~gEL~iSpvGLs~~t~laP~~~~s~~ma~wfLt~a~~~~l~g~va~~~~~~~~~~~~~~~~~~F~~~g~v~i~~~~~~ 483 (498)
T COG3104 404 QSFGELFISPVGLSMVTKLAPPALKSFIMAMWFLTVAAGQTLGGQVAGLTAVTDPAYTAFIEGRVFGTIGVVAIVIGILL 483 (498)
T ss_pred HHHHHHHhCHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhhceecccccccchhhhhhhhhhhHHHHHHHHHHHHHHH
Confidence 9999999999999999999999889999999999999888888888774 2334455677888887776665444
Q ss_pred Hh
Q 014481 287 KI 288 (423)
Q Consensus 287 ~~ 288 (423)
+.
T Consensus 484 ~~ 485 (498)
T COG3104 484 LL 485 (498)
T ss_pred HH
Confidence 33
No 258
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]
Probab=97.58 E-value=0.0027 Score=62.59 Aligned_cols=177 Identities=18% Similarity=0.074 Sum_probs=129.6
Q ss_pred hHHHHHHHHHHHHHHHhhh-hhhhhhHHHhhhhhCCCcchhhHHHHHHHHHHHhhhhhhhhHhhHh-cCchHHHHHHHHH
Q 014481 112 RYKLIGTTSLAFVICNMDK-VNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIF-GGRKVLQTGVLIW 189 (423)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-G~r~~~~~~~~~~ 189 (423)
.|+....+.....+.-+.. ....+.+..+.++++.+...+.-..+.+.-.....+++++.++|-| ||-+++.++.++.
T Consensus 35 ~~~s~~~il~~e~~e~~a~~g~~~nlv~ylt~~~~~~~~~aa~~v~~f~G~~~~~~l~g~~laD~f~gry~tI~~~s~i~ 114 (571)
T KOG1237|consen 35 GWLSAPFILGNEVLERLAFFGLVSNLVTYLTLELHASGGGAANNVNAFGGTQFLLPLLGAFLADSFLGRYFTINIGSLIS 114 (571)
T ss_pred hhHhHHHHHHHHHHHHHhHhcchhHHHHHHHHHhccchHHHHHHHHHHhhHHHHHHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 3444444443333333333 3345677778889998888787888888888888889999999975 8888888888887
Q ss_pred HHHHHHHHHhhhH------------------------HHHHHHHHHHHHhhcccchHhHHHHHHhcCC---CC---chhh
Q 014481 190 SLATALLPLLAGF------------------------MPGLVLSRVLVGIGEGVSPSAATDLIARSIP---LE---ERSR 239 (423)
Q Consensus 190 ~~~~~~~~~~~~~------------------------~~~~~~~~~l~G~~~~~~~~~~~~~i~~~~~---~~---~r~~ 239 (423)
.++.+++.+.+.- ...+.....+..+|.|+.-+...++-+|-++ ++ .+..
T Consensus 115 ~~G~~~lt~~a~~~~l~p~~~~~~~~~~~c~~~s~~q~~~~~~~l~lia~G~gg~r~~~~~fGadQfd~~~~~~~~~~~~ 194 (571)
T KOG1237|consen 115 LLGLFGLTLSAMIPALLPFMCKFKPGGNVCESPSKLQLAVLYGALYLIALGAGGIRPCLLAFGADQFDELDPVEVKGIPS 194 (571)
T ss_pred HHHHHHHHHHHHhhhcCCccccCCCCCCcccCcchHHHHHHHHHHHHheeccCCCCCcchhhcccccCccCcchhhCccc
Confidence 7776544322110 1246666777788999999999999999998 22 2336
Q ss_pred HHHHHHhhhhhHHHHHHhhHHHhhhccCchHHHHHHHHHHHHHHHHHHh
Q 014481 240 AVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAWFSGFKI 288 (423)
Q Consensus 240 ~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~~~~~~~~~~~~~~~~~~ 288 (423)
.+.++....++|..++..+..++-+..||.+.|.+..+..++++++++.
T Consensus 195 fFnW~yf~~~~g~l~a~t~~vyiq~~~~w~lgf~i~~~~~~lai~iF~~ 243 (571)
T KOG1237|consen 195 FFNWFYFSQNGGALLAQTVLVYIQDNVGWKLGFGIPTVLNALAILIFLP 243 (571)
T ss_pred chhHHHHHHHHHHHHHHHHHHhhhhcccceeeccHHHHHHHHHHHHHHc
Confidence 7888999999999999999888888889999999988887666555443
No 259
>KOG3810 consensus Micronutrient transporters (folate transporter family) [Coenzyme transport and metabolism]
Probab=97.58 E-value=0.0002 Score=63.95 Aligned_cols=239 Identities=13% Similarity=0.018 Sum_probs=140.6
Q ss_pred HHHhhhhhhhhHhhHhcCchHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhhcccchHhHHHHHHhcCCCCchhhH
Q 014481 161 GYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRA 240 (423)
Q Consensus 161 ~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~ 240 (423)
.+.+.-.+.=.+.|..-.|+++++-.+...+..+++ .+.++.+.+=+.-++.|...+. ..+.++++-...+++++.++
T Consensus 54 SYLv~LvpvFlLTD~lrYKPvivlq~ls~v~~w~~l-v~g~sV~~mQvlE~FyG~~tAa-EIAYysYIYs~Vd~~~Yqrv 131 (433)
T KOG3810|consen 54 SYLVGLVPVFLLTDYLRYKPVVVLQALSGVPVWIML-VFGPSVKAMQVLEFFYGPATAA-EIAYYSYIYSKVDPEMYKRV 131 (433)
T ss_pred HHHHHHHHHHHHhhhhhcceeeeeeccchhHHHHHH-HhcCCchheeeehhhcChHHHH-HHhhhheeeeecCHHHHHHH
Confidence 444555556668899989998887655544444444 5667777777777888877543 45667788888899999999
Q ss_pred HHHHHhhhhhHHHHHHhhHHHhhhccCch--HHHHHHHHHHHHHHHHHHhhccCCcCcCCCCCcchhh------hhhhhh
Q 014481 241 VSFVFGGLSFGSVAGLLLAPPIIENLGWE--SVFYIFGLLGIAWFSGFKILQEGETSNGATLAPRSNY------INMKKS 312 (423)
Q Consensus 241 ~~~~~~~~~~g~~~g~~~~~~l~~~~gw~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~ 312 (423)
.|....+.-.|-.+|..++..++....+. ..=.+......+..+..+++|..++..--...+++.. ...+..
T Consensus 132 t~y~RaA~L~g~~~g~vlaQlLvs~~~~sy~~LN~ISL~~~~ia~~~A~fLP~v~rSl~f~~~~~~~~v~~~e~~~~~~~ 211 (433)
T KOG3810|consen 132 TGYCRAAFLVGKFVGSVLAQLLVSLETLSYTTLNYISLAEVTIAVLLALFLPRVKRSLYFHRLEDKISVGDLEEMNPQAS 211 (433)
T ss_pred HHHhHHHHHHHhHHHhHHHHHHhhhcccchhhhchhhHHHHHHHHHHHhhCCCCchhhhhhcccccceeccchhcCccch
Confidence 99999999999999988888887653332 2222222223344555566666552211111110000 000000
Q ss_pred hhhhHHhhccccCCCcHHHhhhcHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHhhCC-ChhhHHHHHHHHHHHHHHHHHH
Q 014481 313 LSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSL-NLTEAAWVSILPPLASVLVTSI 391 (423)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~-s~~~~~~~~~~~~~~~~~~~~~ 391 (423)
..+... .....-...+....+||.+....+...+...+++....+......+.-.- ...--|..=++..+.++++.+.
T Consensus 212 ~~~~l~-~~~~~l~~~l~~~y~np~ll~WSlWwAl~scg~~QV~nY~Q~LW~~~~~~~~~vyNG~veAv~tlLGa~~~~~ 290 (433)
T KOG3810|consen 212 YMSYLR-GAFVLLWRDLQECYSNPRLLKWSLWWALASCGYYQVTNYTQILWKEVAPNPANVYNGAVEAVSTLLGAIAALA 290 (433)
T ss_pred hhHHHH-HHHHHHHHHHHHHhcCchhhhhHHHHHHhhchhHHHHHHHHHHHHhhCCCchhhhcCHHHHHHHHHHHHHHHH
Confidence 000000 00000011244567888888888888888878887777776666553211 1112245556677777888888
Q ss_pred HHHHhHHhhhc
Q 014481 392 AAQFADNLIAT 402 (423)
Q Consensus 392 ~g~l~dr~~~r 402 (423)
.|.+--++.|.
T Consensus 291 ~g~l~i~w~r~ 301 (433)
T KOG3810|consen 291 AGYLNINWNRW 301 (433)
T ss_pred HHheeeccchh
Confidence 88887665554
No 260
>PRK03612 spermidine synthase; Provisional
Probab=97.56 E-value=0.0053 Score=60.19 Aligned_cols=139 Identities=18% Similarity=0.177 Sum_probs=82.8
Q ss_pred hhhhhCCCcchhhHHHHHHHHHHHhhhhhhhhHhhHhcCchHHHHH-HHHHH-HHHHHHHH-hh--h-HHHHHHHHHHHH
Q 014481 140 MSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTG-VLIWS-LATALLPL-LA--G-FMPGLVLSRVLV 213 (423)
Q Consensus 140 ~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~-~~~~~-~~~~~~~~-~~--~-~~~~~~~~~~l~ 213 (423)
+...+|.+....+.+.+++.++..+|+.+++++.++.-++...+-. ..+.+ +...+... .. . ....++...++.
T Consensus 41 l~~~~G~s~~~~~~ii~~fl~glalGs~l~~~~~~~~~~~~~~~e~~i~l~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~ 120 (521)
T PRK03612 41 ASYLLGDSVTQFSTVIGLMLFAMGVGALLSKYLLRDAAAGFVAVELLLALLGGLSALILYAAFAFQGLSRLLLYVLVLLI 120 (521)
T ss_pred HHHHhCchHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4445788888899999999999999999998886443222221111 11111 11111101 11 1 111223344566
Q ss_pred HhhcccchHhHHHHHHhcCCCCchhhHHHHHHhhhhhHHHHHHhhHHHhh-hccCchHHHHHHHHHH
Q 014481 214 GIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPII-ENLGWESVFYIFGLLG 279 (423)
Q Consensus 214 G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~-~~~gw~~~~~~~~~~~ 279 (423)
++..|+..|....+..+... ++-+...|-.+....+|+++|.++.+++. ...|-....++.+.+.
T Consensus 121 ~~l~G~~~Pl~~~~~~~~~~-~~~g~~~g~ly~~ntlGa~~G~l~~~~vLlp~lG~~~t~~~~a~l~ 186 (521)
T PRK03612 121 GLLIGMEIPLLMRILQRIRD-QHLGHNVATVLAADYLGALVGGLAFPFLLLPRLGLIRTAALTGSLN 186 (521)
T ss_pred HHHHHHHHHHHHHHHHhccc-cchhhhhhhhHhHHhHHHHHHHHHHHHHHHHhcchHHHHHHHHHHH
Confidence 77777777777666654322 34567788888889999999999888765 4566544444444443
No 261
>KOG3097 consensus Predicted membrane protein [Function unknown]
Probab=97.44 E-value=0.025 Score=50.62 Aligned_cols=101 Identities=17% Similarity=0.140 Sum_probs=65.0
Q ss_pred HHHHHhhhhhhhhHhhHhcCchHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhhcccchHhHHHHHHhcCCC--Cc
Q 014481 159 FWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPL--EE 236 (423)
Q Consensus 159 ~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~i~~~~~~--~~ 236 (423)
.+..+..+++.+.++.++|-|+++.++...+......- .-+.+..++-.....|++.+..+..-.+++++.-.. +.
T Consensus 68 y~~l~~s~m~~~~~Ir~~g~K~tm~lav~~Y~lyiA~N--l~pr~~tlVPa~~~~G~aa~p~W~SkgtYlT~~g~~ya~~ 145 (390)
T KOG3097|consen 68 YLSLIDSSMFMPLLIRFLGTKWTMVLAVFPYALYIAAN--LEPRYETLVPAGLVLGMAAGPIWASKGTYLTPMGQNYANQ 145 (390)
T ss_pred hHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhh--cchhHHhhccHHHhhccccccccccCcceecHHHHHHHHh
Confidence 33444555666689999999999998877765543222 234456788889999999998888777666655431 23
Q ss_pred h---------hhHHHHHHhhhhhHHHHHHhhHHH
Q 014481 237 R---------SRAVSFVFGGLSFGSVAGLLLAPP 261 (423)
Q Consensus 237 r---------~~~~~~~~~~~~~g~~~g~~~~~~ 261 (423)
| .+..|.+.+.+..+...|..++..
T Consensus 146 ~~~q~~~~~~~~ffg~Ffii~~~~qv~gn~issl 179 (390)
T KOG3097|consen 146 RGEQAGDGMKVRFFGEFFIIFQCAQVWGNLISSL 179 (390)
T ss_pred hhhhccCceeeeehhHHHHHHHHHHHHHHHHHHH
Confidence 3 345555555555555555444433
No 262
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=97.38 E-value=0.00038 Score=64.66 Aligned_cols=180 Identities=12% Similarity=-0.028 Sum_probs=114.1
Q ss_pred HHHHHHHHHHHHhhhhhhhhhHHHhhhhhCCCcchhhHHHHHHHHHHHhhhhhhhhHhhHhcC-chHHHHHHHHHHHHHH
Q 014481 116 IGTTSLAFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGG-RKVLQTGVLIWSLATA 194 (423)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~-r~~~~~~~~~~~~~~~ 194 (423)
++++.+++.......+.....+......-|.+....|++.....++.++++.+.|.+.||... |.+.++......++.+
T Consensus 268 F~il~~~ygi~~g~F~~l~~~l~~~l~~sgY~~~~aG~ig~l~iv~Gmlga~~~gii~Dktk~fk~~~~v~~~~~~v~~~ 347 (480)
T KOG2563|consen 268 FIILAICYGIGLGLFNSLSTLLNLALCPSGYEGVFAGYIGALMIVAGMLGALASGIIADKTKKFKLTTLVLYLFALVGTL 347 (480)
T ss_pred HHHHHHHHhhhHHHHHHHHHHhhhccccccCCccccchhHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHH
Confidence 444445554444444555555554555567777889999999999999999999999999865 5555555554444432
Q ss_pred HHHHhh---hHHHHHHHHHHHHHhhcccchHhHHHHHHhcCCCCchhhHHHHHHhhhhhHHHHHHhhHHHhhhccC---c
Q 014481 195 LLPLLA---GFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLG---W 268 (423)
Q Consensus 195 ~~~~~~---~~~~~~~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g---w 268 (423)
....++ ...+.++....+.|++..+..|...-+-.|..-|..-+.-.|+.+....+-+++-..+.+...+..+ |
T Consensus 348 ~l~~~t~~~~~~viv~~t~~~~g~~~~~~~Pig~ElgvE~TyPv~E~tSsGll~~~gq~f~~~~~~~~~~~~~~~~~~~~ 427 (480)
T KOG2563|consen 348 MLLTCTLFLGDSVIVFTTCGLLGFFGTGYLPIGFELGVETTYPVAEGTSSGLLNLSGQIFGVILVFIMGILAEDLGPPGN 427 (480)
T ss_pred HHHHhhccCCceEehhhhHHHHHHhhcCCCCcceeeeeeeccccCCcccceeEEeehhHHHHHHHHHHHHHhhccCCCCC
Confidence 221122 2224556666778888888888888877777655666677777777766666666677777766554 3
Q ss_pred hH-HHHHHHHHHHHHHHHHHhhccCCcC
Q 014481 269 ES-VFYIFGLLGIAWFSGFKILQEGETS 295 (423)
Q Consensus 269 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (423)
.+ .-+......++.+++..+++++.++
T Consensus 428 ~~~~~i~~~~~~~l~~~lva~~r~~y~R 455 (480)
T KOG2563|consen 428 TFPANIFLTVSALLGAILVAFFRPDYRR 455 (480)
T ss_pred CccchhHhHHHHHHHHHHHhhhhhhHHh
Confidence 33 3333444444455555566555443
No 263
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=97.12 E-value=0.002 Score=61.32 Aligned_cols=171 Identities=15% Similarity=0.127 Sum_probs=105.7
Q ss_pred hHHHHHHHHHHHHHHHhhhhhhhhh-HHHhhhhhCCCcchhhHHHHHHHHHHHhhh--hhhhhHhhH---hcCchHHHHH
Q 014481 112 RYKLIGTTSLAFVICNMDKVNLSVA-IIPMSHRFGWNSSVAGLVQSSFFWGYALSQ--LPGGWLAKI---FGGRKVLQTG 185 (423)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~--~~~g~l~dr---~G~r~~~~~~ 185 (423)
.|...+.+.+..+...+........ -+.....++++.++.-+..+.......+.+ +......-| +..|..+..+
T Consensus 260 d~~~~~vc~~~~~~~~~~~~~iet~~~~~~m~~y~w~~~~av~~~gi~~~~~g~ls~~~~l~~~f~~l~~i~~r~~~~~g 339 (488)
T KOG2325|consen 260 DWVAVLVCIFLRFVVNFIATTIETLSSALTMVMYGWTGSEAVLYNGITLSISGILSVILLLLYIFTRLGKIDKRRIILLG 339 (488)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHhccccchHHHhhhhHHHHHHHHHHHHHHHHHHHHhhhhccceeeeeh
Confidence 4566666666666666665554444 334556678877776555554333333222 222222333 3445555555
Q ss_pred HHHHHHHHHHHHHh----h--------------------------hHHHHHHHH-HHHHHhhcccchHhHHHHHHhcCCC
Q 014481 186 VLIWSLATALLPLL----A--------------------------GFMPGLVLS-RVLVGIGEGVSPSAATDLIARSIPL 234 (423)
Q Consensus 186 ~~~~~~~~~~~~~~----~--------------------------~~~~~~~~~-~~l~G~~~~~~~~~~~~~i~~~~~~ 234 (423)
.++......+.... + .+.+.++++ -++.|.+.........++.++...|
T Consensus 340 ~l~~f~~~~i~~yp~~~~s~pv~~~~~~~~~~~~~~y~wc~~~~~v~~~~~l~~~i~~~g~~~P~~~~~~~tlySkiLgp 419 (488)
T KOG2325|consen 340 FLIFFLSYYIFTYPWGFYSGPVQPYNTTYAGCDFEEYSWCDTTTAVPLILYLISFIVVFGIAFPFISTALDTLYSKILGP 419 (488)
T ss_pred HHHHHHhhheeeeeccccccccccccccccCcCcccchhhccCcccChhhheeehhheeccccccccchHHHHHHHHhCC
Confidence 34333333222110 0 011223333 3566777777777888999999999
Q ss_pred CchhhHHHHHHhhhhhHHHHHHhhHHHhhhccCchHHHHHHHHHHHHH
Q 014481 235 EERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAW 282 (423)
Q Consensus 235 ~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~~~~~~~~~~~~ 282 (423)
++++.+.+++......+..+||++...+....|.|+...+.+...++.
T Consensus 420 ~~q~~~qg~~~~~~s~~~~~~~~~~t~~~~~~g~~~v~~~~~~~~l~~ 467 (488)
T KOG2325|consen 420 RDQGTMQGVFSISGSIARVVGPIFSTAIFTLSGPRPVWIILLCLLLVV 467 (488)
T ss_pred ccccceeEEEEeccchhhhhhHHHHhhhHHhcCccHHHHHHHHHHHHH
Confidence 999999999999999999999999999998889887776665555444
No 264
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=97.06 E-value=0.0023 Score=61.41 Aligned_cols=149 Identities=15% Similarity=0.038 Sum_probs=105.5
Q ss_pred CCcchhhHHHHHHHHHHHhhhhhhhhHhhHhcCchHHHHHHHHHHHHHHHHHHhh---------hHHHHHHHHHHHHHhh
Q 014481 146 WNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPLLA---------GFMPGLVLSRVLVGIG 216 (423)
Q Consensus 146 ~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~l~G~~ 216 (423)
.++...|.+..+..++..++..+...+.-+..-|+++.++.++.++..+.-..+. ++.+..+..-++..+.
T Consensus 252 fs~~f~~~~~~vg~~~~l~g~~~y~~~~~~~~~R~~~~~t~~~~~~~~l~~~~lv~~~n~~~Gi~d~~f~lgd~~l~~~~ 331 (433)
T PF03092_consen 252 FSPSFYGTLSIVGSIASLLGILLYRKYFSNWSWRRIFVVTTLVSVLASLFDLLLVTRWNLDLGIPDQWFALGDTILEEVI 331 (433)
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHhcccEEEEEEEeeeeCcCCeEEEEEhHHHHHHH
Confidence 7888889998888889999999988888888888888888777665544321111 1112223334555555
Q ss_pred cccchHhHHHHHHhcCCCCchhhHHHHHHhhhhhHHHHHHhhHHHhhhccCc--------hHHHHHHHHHHHHHHHHHHh
Q 014481 217 EGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGW--------ESVFYIFGLLGIAWFSGFKI 288 (423)
Q Consensus 217 ~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw--------~~~~~~~~~~~~~~~~~~~~ 288 (423)
....+-+...++++..|+..-|+.+++.....++|..++..++..+.+.++. .+..++..++.++.+....+
T Consensus 332 ~~i~~mP~lvl~a~lcP~G~Egt~yall~s~~Nlg~~~s~~lg~~l~~~~~vt~~~f~~l~~lili~~~~~ll~l~ll~l 411 (433)
T PF03092_consen 332 GMIAFMPSLVLAARLCPKGSEGTVYALLASFSNLGSSVSSTLGAFLMELFGVTRDDFSNLWLLILICSVIQLLPLPLLFL 411 (433)
T ss_pred HHHHHHHHHHHHHHHCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccccchHHHHHHHHHHHHHHHHHHHH
Confidence 5666677788999999999999999999999999999999999998876552 23344445555444555556
Q ss_pred hccCCc
Q 014481 289 LQEGET 294 (423)
Q Consensus 289 ~~~~~~ 294 (423)
+|+..+
T Consensus 412 Lp~~~~ 417 (433)
T PF03092_consen 412 LPPQKR 417 (433)
T ss_pred cCCCch
Confidence 665443
No 265
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=96.96 E-value=0.0052 Score=57.52 Aligned_cols=126 Identities=17% Similarity=0.177 Sum_probs=74.5
Q ss_pred hCCCcchhhHHHHHHHHHHHhhhhhhhhHhhHhc----CchHHHHHHHHHHH------HH-HHHHHhhhHHHHHHHHHHH
Q 014481 144 FGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFG----GRKVLQTGVLIWSL------AT-ALLPLLAGFMPGLVLSRVL 212 (423)
Q Consensus 144 ~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G----~r~~~~~~~~~~~~------~~-~~~~~~~~~~~~~~~~~~l 212 (423)
.|.+..+.-++..++..+..+|.+++|.++||+. +-....+..+..+. .. .+....+.....+....++
T Consensus 278 ~~~~~~~~~ifg~vt~~~G~lGvl~Ggiisd~~~~~~~~~~~~~~~q~~~~~g~~~s~~~L~~~~~~~~~s~~~~~il~~ 357 (493)
T KOG1330|consen 278 IGFDHNATLIFGGVTCAGGSLGVLFGGIISDKLSRIFPNSGTLRASQLSAALGAPLSIPFLFLFPAFTSSSMIFGLILFL 357 (493)
T ss_pred hCCccccchhhhhHHHhhchhhheehHHHHHHHHHhcccccchhHHHHHHhhhhhHHHHHHHHHHhhhhHHHHHHHHHHH
Confidence 3455556667777888999999999999999942 21222222211111 11 1111222222223333344
Q ss_pred HHhhcc-cchHhHHHHHHhcCCCCchhhHHHHHHhhhhh-HHHHHHhhHHHhhhc-cCch
Q 014481 213 VGIGEG-VSPSAATDLIARSIPLEERSRAVSFVFGGLSF-GSVAGLLLAPPIIEN-LGWE 269 (423)
Q Consensus 213 ~G~~~~-~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~-g~~~g~~~~~~l~~~-~gw~ 269 (423)
.|.... ..+....-+..+..|+++|..++++-.....+ |..-+|.+.|.+.++ .||+
T Consensus 358 ~g~~~~~~~~a~n~~i~l~vV~p~~Rt~a~a~~~~~~h~fgd~~~p~ivGilsd~l~g~~ 417 (493)
T KOG1330|consen 358 VGETISWFNWATNNPIFLEVVPPSRRTTAYALDTVFEHIFGDAASPYIVGILSDKLRGYK 417 (493)
T ss_pred HHHHHHhcccccccceeeEecCcccccHHHHHHHHHHHHhccCCCcceehhHHHHhhCCC
Confidence 444332 33445566778888999999999997665554 555556588998876 4666
No 266
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=96.86 E-value=0.048 Score=51.99 Aligned_cols=144 Identities=17% Similarity=0.186 Sum_probs=96.4
Q ss_pred HHHHHHHHHHHhhhhhhhhhHHH---hhhhhCCCcc-hhhHHHHHHHHHHHhhhhhhhhHhh---HhcCchHHHHHHHHH
Q 014481 117 GTTSLAFVICNMDKVNLSVAIIP---MSHRFGWNSS-VAGLVQSSFFWGYALSQLPGGWLAK---IFGGRKVLQTGVLIW 189 (423)
Q Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~s~~-~~~~~~~~~~~~~~~~~~~~g~l~d---r~G~r~~~~~~~~~~ 189 (423)
..+....+..++..+.+....|. +....+.+.. ..+.......++..++..+.+.+.+ ++|+++.+.++.++.
T Consensus 243 l~L~~~f~~tG~~~Sf~~~iypt~i~ft~~~~~n~~~~~ai~~~~~g~g~v~~g~~~~~l~~rir~fg~~~~~~~~~~~~ 322 (461)
T KOG3098|consen 243 LLLFPFFFYTGLETSFWISIYPTCISFTRKLGSNTTYLIAIYSIGIGLGEVIGGLDFSILSKRIRGFGRKPTVLIGIIIH 322 (461)
T ss_pred HHHHHHHHHHHHHHHHHHhccchhhhhhhhccCcchhHHHHHHHHHhHHHHHHHHHHHHHhhhhhhcccCcchhHHHHHH
Confidence 34444455555555555555555 2223333322 2344444556666666677777765 579999999988887
Q ss_pred HHHHHHHHHhh-----------------hHHHHHHHHHHHHHhhcccchHhHHHHHHhcCCCCchhhHHHHHHhhhhhHH
Q 014481 190 SLATALLPLLA-----------------GFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGS 252 (423)
Q Consensus 190 ~~~~~~~~~~~-----------------~~~~~~~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~ 252 (423)
.++.++..... ++....+++-++.|++-+......+.++++.+| ++|..+.+++..-..++.
T Consensus 323 ~~~~~li~l~~p~dap~~~t~~~~~~~~~~~~~~~ii~~l~G~~D~~~~t~~~~ii~~~~~-~~~~~~fsi~kfyq~~~s 401 (461)
T KOG3098|consen 323 LIGFLLIHLSFPNDAPLRPTDSPPLLFTPSYYLALIIGFLLGFGDACFNTQRYVIIALLYP-DDRAQAFSLFKFYQSVAS 401 (461)
T ss_pred HHHHHHHhccccccCCCCCCcccccccccchhHHHHHHHHHhhHHHHHHHHHHHHHHHHhc-CchHHHHHHHHHHHHHHH
Confidence 77765552211 134567788899999999999999999999994 899999999888888887
Q ss_pred HHHHhhHHH
Q 014481 253 VAGLLLAPP 261 (423)
Q Consensus 253 ~~g~~~~~~ 261 (423)
.++-.....
T Consensus 402 ~v~~f~~~~ 410 (461)
T KOG3098|consen 402 CVAFFFSPY 410 (461)
T ss_pred HHHhhhhhh
Confidence 776555444
No 267
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=96.83 E-value=0.00028 Score=69.29 Aligned_cols=153 Identities=21% Similarity=0.241 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHHhhhhhhhhhHHH-hhhhhCCCcchhhHHHHHHHH-HHHhhhhhhhhHhhHhc--CchHHHHHHHH
Q 014481 113 YKLIGTTSLAFVICNMDKVNLSVAIIP-MSHRFGWNSSVAGLVQSSFFW-GYALSQLPGGWLAKIFG--GRKVLQTGVLI 188 (423)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~s~~~~~~~~~~~~~-~~~~~~~~~g~l~dr~G--~r~~~~~~~~~ 188 (423)
...+....++.....+....+..+.|. ++.+|+.++++++++..+..+ +.++|.+++|++..|+. .|..+.+..+.
T Consensus 304 Np~f~~~~la~~~~~~~~~G~~tF~pKylE~QF~~sas~A~~l~G~v~ip~~~~G~llGG~ivkk~kl~~~~~~~~~~v~ 383 (539)
T PF03137_consen 304 NPVFMCLILAGVFESFIVSGFATFLPKYLESQFGLSASQASLLTGIVSIPGAALGILLGGYIVKKFKLSARGAAKFCIVV 383 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHhhhhcchhheehheEEEEEEEecCcHHHHHHHHHHH
Confidence 355666777777777777788888887 667899999999998876655 66688899999999974 34444443333
Q ss_pred HHHHHHH---HHHh----------h----------------------------------------hHHHHHHHHHHHHHh
Q 014481 189 WSLATAL---LPLL----------A----------------------------------------GFMPGLVLSRVLVGI 215 (423)
Q Consensus 189 ~~~~~~~---~~~~----------~----------------------------------------~~~~~~~~~~~l~G~ 215 (423)
..+..++ ..+. . +.+..+++..++.-+
T Consensus 384 ~~v~~~~~~~~~~~~C~~~~~aGv~~~y~~~~~~~~~~~~~~~Cn~~~~~~~~~a~~G~C~~~C~~~~~~Fl~~~~~~~~ 463 (539)
T PF03137_consen 384 SIVSVILYSPLFFLGCPNPPIAGVTVPYHNSTSSSPSCNLTCSCNSCCSSGNGSATPGKCPSDCCNKLIPFLILLFILSF 463 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHeecCCCCceeeecCccccccCCCCCCCCCCCCCCccCCCcccccCCCcCcccccccHHHHHHHHHHHH
Confidence 3222222 0000 0 001223344444444
Q ss_pred hcccchHhHHHHHHhcCCCCchhhHHHHHHh-hhhhHHHHHHhhHHHhhhc
Q 014481 216 GEGVSPSAATDLIARSIPLEERSRAVSFVFG-GLSFGSVAGLLLAPPIIEN 265 (423)
Q Consensus 216 ~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~-~~~~g~~~g~~~~~~l~~~ 265 (423)
..+.........+-..+++++|..++|+... ..-+|.+-||++.|.++|.
T Consensus 464 ~~~~~~~p~~~i~LR~V~~~~rs~AlGv~~~~~rllg~IPgPIifG~iiD~ 514 (539)
T PF03137_consen 464 FTFMSQVPSTLITLRCVPPEQRSFALGVQWLIIRLLGFIPGPIIFGAIIDS 514 (539)
T ss_dssp ---------------------------------------------------
T ss_pred HHHhcccchheeeeccCChhhcchhhhHHHHHHHhhcCcchHHHHhHHHhh
Confidence 4444455555666677888999999999665 4557889999999999986
No 268
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=96.82 E-value=0.0056 Score=61.83 Aligned_cols=79 Identities=19% Similarity=0.201 Sum_probs=56.7
Q ss_pred HHHHHHHHHHHHHhhhhhhhhhHHH-hhhhhCCCcchhhHHHHHHHH-HHHhhhhhhhhHhhHhcC--chHHHHHHHHHH
Q 014481 115 LIGTTSLAFVICNMDKVNLSVAIIP-MSHRFGWNSSVAGLVQSSFFW-GYALSQLPGGWLAKIFGG--RKVLQTGVLIWS 190 (423)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~s~~~~~~~~~~~~~-~~~~~~~~~g~l~dr~G~--r~~~~~~~~~~~ 190 (423)
.+....+..++.......+...+|. +++.+|+++.+++++.+...+ +.+++.+++|+++||++. |+.+.++.++..
T Consensus 331 ~f~~~~l~~~~~~~~~~~~~~~lP~yl~~~~g~s~~~ag~l~~~~~i~~~~vG~~l~G~l~~r~~~~~~~~~~~~~~~~~ 410 (633)
T TIGR00805 331 IYMLVILAQVIDSLAFNGYITFLPKYLENQYGISSAEANFLIGVVNLPAAGLGYLIGGFIMKKFKLNVKKAAYFAICLST 410 (633)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHhhhhhhhHHHHHHhhhhheeeeecccHHHHHHHHHHHHH
Confidence 3444555555555666666667777 455799999999999988776 678999999999999984 566666655544
Q ss_pred HHH
Q 014481 191 LAT 193 (423)
Q Consensus 191 ~~~ 193 (423)
++.
T Consensus 411 ~~~ 413 (633)
T TIGR00805 411 LSY 413 (633)
T ss_pred HHH
Confidence 443
No 269
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=96.80 E-value=0.025 Score=52.52 Aligned_cols=172 Identities=16% Similarity=0.077 Sum_probs=79.4
Q ss_pred HHHHHHHHHHHHHhhhhhhhhhHHHhhhhhCCCcchhhHHHHHHHHHHHhhhhhhhhHhhHhcCchHHHHH--HHHHHHH
Q 014481 115 LIGTTSLAFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTG--VLIWSLA 192 (423)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~--~~~~~~~ 192 (423)
.....++..+-....++.+....+++.+++-.+.. .......+.+...+..++...+--+...|....++ ..+.++.
T Consensus 19 v~~i~~llGiG~LlpWN~fiTa~~y~~~~~~~~~~-~~~F~~~~~~~a~i~~ll~~~~n~~~~~~~~~~~~~~l~~~~il 97 (406)
T KOG1479|consen 19 VYLIFLLLGIGTLLPWNMFITASDYYYYRFPGYHN-SKNFTSSYTLAAQIPLLLFNLLNAFLNTRLRTRVGYLLSLIAIL 97 (406)
T ss_pred HHHHHHHHhcccccchHhhhccHHHHHhhcCCCch-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34444444445556677777777777766643333 33333344444444444444443333322222222 1111111
Q ss_pred HH-HH-HHh-------hhHHHHHHHHHHHHHhhcccchHhHHHHHHhcCCCCchhhHHHHHHhhhhhHHHHHHhhHH---
Q 014481 193 TA-LL-PLL-------AGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAP--- 260 (423)
Q Consensus 193 ~~-~~-~~~-------~~~~~~~~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~--- 260 (423)
.+ .+ ... ...+...++.-++.+++.+..........++ +|++.- .-+..+.++++++..++.-
T Consensus 98 ~i~~l~~~~v~~~~~~~~ff~vt~~~vv~~~~a~a~~qgs~~G~a~~-~P~~yt----qavm~G~a~aG~l~Sl~~i~tk 172 (406)
T KOG1479|consen 98 FIVTLDLALVKTDTWTNGFFLVTLIIVVLLNLANAVVQGSLYGLAGL-FPSEYT----QAVMSGQALAGTLTSLLRILTK 172 (406)
T ss_pred HHHHHHHHhhccCCccchhHHHHHHHHHHHhhhhhhhccchhhhhhc-CCHHHH----HHHHhcchhHhHHHHHHHHHHH
Confidence 11 11 111 1234566677778888888887777777666 454433 3333344444444433321
Q ss_pred Hhhhc--cCchHHHHHHHHHHHHHHHHHHhhccC
Q 014481 261 PIIEN--LGWESVFYIFGLLGIAWFSGFKILQEG 292 (423)
Q Consensus 261 ~l~~~--~gw~~~~~~~~~~~~~~~~~~~~~~~~ 292 (423)
...+. .+--..|.+..++.+++++....+++.
T Consensus 173 a~~~~~~~sA~~yF~~s~~~~llC~i~y~~l~~l 206 (406)
T KOG1479|consen 173 AAFSDSRTSALIYFITSTVILLLCFVLYLVLPKL 206 (406)
T ss_pred HhcCCCCceeehhHHHHHHHHHHHHHHHHHhhcc
Confidence 11111 122333444444445555555544443
No 270
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=96.75 E-value=0.076 Score=50.93 Aligned_cols=52 Identities=21% Similarity=0.232 Sum_probs=36.6
Q ss_pred HHHHHHHHHHHHHhhcccchHhHHHHHHhcCCCCchhhHHHHHHhhhhhHHHHHHhh
Q 014481 202 FMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLL 258 (423)
Q Consensus 202 ~~~~~~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~ 258 (423)
.++..++.-++.|++.+.......++.+. +|+ ..++.+..+.+++++++.++
T Consensus 105 ~f~~~~~~v~~~g~~~~~~q~s~~gla~~-fp~----~~~~a~~~G~g~aGv~~s~~ 156 (437)
T TIGR00939 105 FFVTTMASVVIINSGMALLQGSLFGLAGV-FPS----TYSSAVMSGQGLAGVLTSLA 156 (437)
T ss_pred HHHHHHHHHHHHHhhhhhhcccchhhccc-CCH----HHHHHHHhcchhHHHHHHHH
Confidence 45667777788899988888887777764 553 35666666777777666554
No 271
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=96.74 E-value=0.016 Score=55.16 Aligned_cols=141 Identities=18% Similarity=0.087 Sum_probs=97.3
Q ss_pred HHHHHHHHhhhhhhhhhHHHhhhhhCCCcchhhHHHHHHHHHHHhhhhhhhhHhhHhcCchHHHHHHHHHHHHHHHHH--
Q 014481 120 SLAFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLP-- 197 (423)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~-- 197 (423)
.++..+.++..-.+......+...-|+++..+|..-+...+....+.+...++.+|+|..+.-+++...-.+...++.
T Consensus 264 s~alalLY~TVLsf~~lmt~yl~~~G~s~~~igi~R~~gav~Gl~gT~~~p~l~~riGlvr~G~~~l~~q~~~L~~~v~~ 343 (432)
T PF06963_consen 264 SFALALLYFTVLSFGGLMTAYLKSQGYSPSVIGIFRGLGAVFGLLGTWVYPWLMKRIGLVRAGLWSLWWQWVCLALCVVS 343 (432)
T ss_pred HHHHHHHHHHHhcCcHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHHHHHHHHH
Confidence 333333333333344455555556699999999999999999999999999999999999988887654333222211
Q ss_pred -Hhhh------HHHHHHHHHHHHHhhcccchHhHHHHHHhcCCCCchhhHHHHHHhhhhhHHHHHHhhHH
Q 014481 198 -LLAG------FMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAP 260 (423)
Q Consensus 198 -~~~~------~~~~~~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~ 260 (423)
+... +...++.+-++.=+|.=+..-...-++-|..|+++||...|.-....++-.++-..++-
T Consensus 344 ~~~~~~~~~~~s~~~l~~gi~~SR~GLW~fDL~~~qi~Qe~V~~~~Rg~v~gvq~sl~~lf~ll~~~~~i 413 (432)
T PF06963_consen 344 FWAPGSPFSSISAYLLLGGIALSRIGLWSFDLAVTQIMQENVPESERGAVSGVQNSLQSLFELLSFVLTI 413 (432)
T ss_pred HhcCCCCchhhHHHHHHHHHHHHHHHHHhhhHHHHHhhcccCCHHHhhHHHHHHHHHHHHHHHHHHHHHh
Confidence 1111 22234444444445555666777888899999999999999998888888777766644
No 272
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=96.48 E-value=0.0019 Score=61.46 Aligned_cols=71 Identities=20% Similarity=0.227 Sum_probs=58.1
Q ss_pred HHHHHHhhhhhhhhhHHHhhhhhCCCcchhhHHHHHHHHHHHhhhhhhhhHhhHhcCchHHHHHHHHHHHH
Q 014481 122 AFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLA 192 (423)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~ 192 (423)
.++..+.....+.+.++.+.+++|+++.+.|.+...-.+..+++.|++|.++||+-+||.++++.++..+.
T Consensus 19 f~~~~~~~~g~l~pll~vy~kQLGl~p~~~Gtl~g~~P~v~~L~~P~~g~~Adr~r~~r~lllgsl~~~v~ 89 (618)
T KOG3762|consen 19 FYLFFGARFGSLFPLLAVYFKQLGLNPAVVGTLTGTLPLVEFLAAPLWGFLADRYRKRRPLLLGSLLLSVT 89 (618)
T ss_pred eeeeeeecccccchHHHHHHHHcCCCHHHhhhhhhHHHHHHHHhHHHHHHHHHHHHhcCchhHHHHHHHHH
Confidence 34444455667778888899999999999999999999999999999999999998887777765544443
No 273
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=96.22 E-value=0.15 Score=48.97 Aligned_cols=109 Identities=15% Similarity=-0.029 Sum_probs=71.0
Q ss_pred hHHHHHHHHHHHhhhhhhhhHhhHhcCc--hHHHHH--HHHHHHHHHHHHHh--------hhHHHHHHHHHHHHHhhccc
Q 014481 152 GLVQSSFFWGYALSQLPGGWLAKIFGGR--KVLQTG--VLIWSLATALLPLL--------AGFMPGLVLSRVLVGIGEGV 219 (423)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~g~l~dr~G~r--~~~~~~--~~~~~~~~~~~~~~--------~~~~~~~~~~~~l~G~~~~~ 219 (423)
-.....+.++-.+|..+..+.. .-++| .+++.+ =+++....+++..- -++-+..++..++.|+..|.
T Consensus 310 ~i~~~~fNvgD~vGR~~~~~~~-~p~~~~~~l~i~s~~R~iFIPlf~lcn~~~~~~~p~~~~~d~~~~~~~~l~gltnGy 388 (437)
T TIGR00939 310 IICFLLFNLFDWLGRSLTSKFM-WPDEDSRWLPILSFLRVLFIPLFLLCNYPQRSRLPVFFPGDAYFIILMLLFGFSNGY 388 (437)
T ss_pred HHHHHHHHHHHHHHhhhhheeE-eeCCCccchHHHHHHHHHHHHHHHHhcCCccccCCeeecccHHHHHHHHHHHHhhhH
Confidence 4555667777777776554321 11222 333222 12222222232111 12336677778999999999
Q ss_pred chHhHHHHHHhcCCCCchhhHHHHHHhhhhhHHHHHHhhHHH
Q 014481 220 SPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPP 261 (423)
Q Consensus 220 ~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~ 261 (423)
.....+.+..+..++++|..+-.+...+..+|..+|..++-.
T Consensus 389 ~~s~~m~~~p~~v~~~e~e~aG~~~~~~l~~Gl~~Gs~l~~~ 430 (437)
T TIGR00939 389 LGSLSMCLAPRQVDPHEREVAGALMVIFLLVGLALGAVLSFL 430 (437)
T ss_pred HHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999888877543
No 274
>KOG3880 consensus Predicted small molecule transporter involved in cellular pH homeostasis (Batten disease protein in human) [General function prediction only]
Probab=95.92 E-value=0.081 Score=47.01 Aligned_cols=138 Identities=17% Similarity=0.108 Sum_probs=89.1
Q ss_pred hhHHHHHHHHHHHhhhhhhhhHhhHhcCchHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhhcccchHhHHHHHHh
Q 014481 151 AGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIAR 230 (423)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~i~~ 230 (423)
.|.+.-+-.+...+..+.+..+.||+..-.-..+..++.+.+.++. +++++.+.-+.+-.+..++.|.......++-+
T Consensus 64 tg~VLLaDilPsL~iKl~~Pff~~rfpf~~Ri~~~v~~sa~s~~lV-afs~s~~~sL~GV~~aSissGlGEiTFL~lss- 141 (409)
T KOG3880|consen 64 TGAVLLADILPSLAIKLTAPFFIHRFPFGFRIALVVLLSALSFFLV-AFSNSVPMSLLGVVFASISSGLGEITFLALSS- 141 (409)
T ss_pred cchhhhhhhhHHHHHHHhchhhhhhcccchHHHHHHHHHhcceEEE-EeccchhHHHhhhhhhhhcCCcceeehhhhhc-
Confidence 4666666677777777888888888654333334445555555555 57787788888888888887766555444433
Q ss_pred cCCCCchhhHHHHHHhhhhhHHHHHHhhHHHhhhc--cCchHHHHHHHHHHHHHHHHHHhhccCCc
Q 014481 231 SIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIEN--LGWESVFYIFGLLGIAWFSGFKILQEGET 294 (423)
Q Consensus 231 ~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~--~gw~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (423)
.++ ....+.++.+.+.++++|..--..+.+. ..-|.+.++...+-++.+...+++.+.++
T Consensus 142 ~Y~----~~~i~~WSSGTGgAGliGa~SYa~lT~~~~~spk~Tlli~l~lP~lfa~~yf~lL~~pe 203 (409)
T KOG3880|consen 142 RYP----SIVIAGWSSGTGGAGLIGASSYAFLTSWANLSPKSTLLIMLFLPALFAFAYFFLLKSPE 203 (409)
T ss_pred cCC----CceeccccCCCCcchhhhhhHHHHHhhhcCCChhhHHHHHHHHHHHHHHHHHheeCCCc
Confidence 233 3456667777788888887766666653 34677777777766666555555544443
No 275
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=95.64 E-value=0.045 Score=54.90 Aligned_cols=151 Identities=17% Similarity=0.197 Sum_probs=98.3
Q ss_pred HHHHHHHHHHHHHhhhhhhhhhHHH-hhhhhCCCcchhhHHHHHHHH-HHHhhhhhhhhHhhHhc--CchHHHHHHHHHH
Q 014481 115 LIGTTSLAFVICNMDKVNLSVAIIP-MSHRFGWNSSVAGLVQSSFFW-GYALSQLPGGWLAKIFG--GRKVLQTGVLIWS 190 (423)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~s~~~~~~~~~~~~~-~~~~~~~~~g~l~dr~G--~r~~~~~~~~~~~ 190 (423)
++....++..+.......+..++|. +.++||.+.+.+..+.+...+ +.++|..++|++..|+- .|....+.++...
T Consensus 393 if~~~~l~~~~~~~~~~G~~tFlPKyLE~Qfg~sas~An~l~G~i~vp~~~~Gi~lGG~iikkfkl~~r~~a~~~~~~~~ 472 (735)
T KOG3626|consen 393 IFMLVVLASVIESLAITGYITFLPKYLETQFGISASLANILTGSIGVPAAAVGIFLGGLIIKKFKLSARGAAKFVIVCSV 472 (735)
T ss_pred hHHHHHHHHHHHHHHHhhHHHhhHHHHHHHcCCCHHHHHHHhhhhhhhhhhhhhhccceeeeeecccHHHHHHHHHHHHH
Confidence 4566677777777777777888887 566799999999998865554 45577788999999874 3444444444333
Q ss_pred HHHHHHH--Hh------------------------------------------------------------------h--
Q 014481 191 LATALLP--LL------------------------------------------------------------------A-- 200 (423)
Q Consensus 191 ~~~~~~~--~~------------------------------------------------------------------~-- 200 (423)
+..+... ++ .
T Consensus 473 l~l~~~~~~~~igC~~~~~aG~~~~y~~~~~~~~~~~~~s~Cn~~C~C~~~~~~PVCg~~G~tY~SpChAGC~~~~~~~~ 552 (735)
T KOG3626|consen 473 LSLLFYSLLFFIGCESSPVAGVTNSYEGSPAFTSHENPFSSCNSDCSCDTSEYEPVCGENGITYFSPCHAGCTESSGTSD 552 (735)
T ss_pred HHHHHHHHHHEecCCCCcccceecCCCCCCccccCCCchhhhhcCCCCCCcCcCcccCCCCCEEeChhhhCCcccccCCC
Confidence 3332210 11 0
Q ss_pred -----------h--------------------HHHHHHHHHHHHHhhcccchHhHHHHHHhcCCCCchhhHHHHHHh-hh
Q 014481 201 -----------G--------------------FMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFG-GL 248 (423)
Q Consensus 201 -----------~--------------------~~~~~~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~-~~ 248 (423)
+ .+..+++..++.-+..+...+..+.++-..+++++|..++|+..+ ..
T Consensus 553 ~~~~ytnCsCv~~~~~~~~~a~~G~C~~~c~~~~~~Fl~~~~~~sf~~~~~~~p~~~i~LR~V~~e~ks~AlG~~~~~ir 632 (735)
T KOG3626|consen 553 GNTIYTNCSCVPTNKNGNGSAKKGYCPNDCCRQFLIFLALFAIGSFIGALGAVPGMLIVLRCVPPEEKSFALGFQWMLIR 632 (735)
T ss_pred CceeeccccccccccCCCceeecCCCCCCcchhhHHHHHHHHHHHHHHHhccCcceEEEEEccCchhchhhhHHHHHHHH
Confidence 0 011233333333333344445556666777899999999999655 55
Q ss_pred hhHHHHHHhhHHHhhhc
Q 014481 249 SFGSVAGLLLAPPIIEN 265 (423)
Q Consensus 249 ~~g~~~g~~~~~~l~~~ 265 (423)
-+|.+-+|++-|+++|.
T Consensus 633 llg~IPsPIifG~~ID~ 649 (735)
T KOG3626|consen 633 LLGFIPSPIIFGAVIDT 649 (735)
T ss_pred HHhcCCchHhhhhhHhh
Confidence 57999999999999984
No 276
>KOG4830 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=95.48 E-value=0.0038 Score=53.59 Aligned_cols=65 Identities=11% Similarity=0.058 Sum_probs=51.8
Q ss_pred HHHHHHHHHHhhhhhhhhhHHHhhhhhCCCcchhhHHHHHHHHHHHhhhhhhhhH---------hhHhcCchHH
Q 014481 118 TTSLAFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWL---------AKIFGGRKVL 182 (423)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l---------~dr~G~r~~~ 182 (423)
...++.+.+-+..+.+..++-.+.++.|.++.....++.+..+.-++..++.|.. .||+|||+..
T Consensus 21 ~yGvGHmlNDitAScWFTYlllfltqiglsp~~~AmlML~GQVtda~st~ftGi~~d~nll~~~idr~G~~~~w 94 (412)
T KOG4830|consen 21 AYGVGHMLNDITASCWFTYLLLFLTQIGLSPSSRAMLMLIGQVTDAISTPFTGIFSDSNLLPACIDRIGRRMSW 94 (412)
T ss_pred eechhHHHhhHHHHHHHHHHHHHHHHhcCCcchhHHHHHhhHHHHHHhcccccccccccccHHHhhhhcceeee
Confidence 4566777777777777777777888999999888888888888888888887643 5789998765
No 277
>PF01733 Nucleoside_tran: Nucleoside transporter; InterPro: IPR002259 Delayed-early response (DER) gene products include growth progression factors and several unknown products of novel cDNAs. Murine and human cDNAs from one novel DER gene (DER12) have been characterised to identify its product and to examine its role in the growth response []. Both sequences encode a hydrophobic 36kDa protein that is predicted to contain 8 transmembrane (TM) domains. The protein has been localised to the nucleolus, where its concentration increases following mitogen stimulation []. Although the function of the protein is unknown, its identification as a nucleolar gene transcriptionally activated by growth factors implicates it as participating in the proliferative response []. Sequence analysis reveals the protein to share a high degree of similarity with the C-terminal portion of equilibrative nucleoside transporters. These proteins are integral membrane proteins which enable the movement of hydrophilic nucleosides and nucleoside analogs down their concentration gradients across cell membranes. ENT family members have been identified in humans, mice, fish, tunicates, slime molds, and bacteria []. ; GO: 0005337 nucleoside transmembrane transporter activity, 0006810 transport, 0016020 membrane; PDB: 1HXI_A.
Probab=95.16 E-value=0.0068 Score=55.41 Aligned_cols=107 Identities=21% Similarity=0.177 Sum_probs=3.8
Q ss_pred HHHHHHHHHHHhhhhhhhhHhhH-hcCchHHHHH--HHHHHHHHHHHH-Hh---------hhHHHHHHHHHHHHHhhccc
Q 014481 153 LVQSSFFWGYALSQLPGGWLAKI-FGGRKVLQTG--VLIWSLATALLP-LL---------AGFMPGLVLSRVLVGIGEGV 219 (423)
Q Consensus 153 ~~~~~~~~~~~~~~~~~g~l~dr-~G~r~~~~~~--~~~~~~~~~~~~-~~---------~~~~~~~~~~~~l~G~~~~~ 219 (423)
..+..+.++-.+|..+.++..=+ ..+|+.++.+ -+++ +..++++ .. -++-+..++..++.|+..|-
T Consensus 186 ~~fl~Fn~gD~iGR~l~~~~~~~~~~~~~l~~~s~~R~~f-iPlf~~cn~~p~~~~~~~~~~~d~~~~i~~~l~g~TNGy 264 (309)
T PF01733_consen 186 VLFLLFNLGDFIGRFLASWPRWPGPSPRWLWILSLLRFLF-IPLFLLCNVQPRPRYLPVLFNSDAWFIILMLLFGFTNGY 264 (309)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHhcchhcceeEecccccccHHHHHHHHHHH-HHHHHHHHhhcccccCCCcccchHHHHHHHHHHHHccch
Confidence 34567888888888877764211 1344444332 1222 2222221 11 12335677778899999999
Q ss_pred chHhHHHHHHhcCCCCchhhHHHHHHhhhhhHHHHHHhhHH
Q 014481 220 SPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAP 260 (423)
Q Consensus 220 ~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~ 260 (423)
.....+.+..+..++++|..+-.+...+..+|..+|..++-
T Consensus 265 l~tl~m~~~p~~v~~~e~e~aG~~~~~~L~~Gl~~Gs~ls~ 305 (309)
T PF01733_consen 265 LSTLAMMYAPKSVSPEERELAGSVMSFFLSFGLFIGSVLSF 305 (309)
T ss_dssp --HHHH-----------------------------------
T ss_pred hhhceeeeCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999988888888888888877654
No 278
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=94.48 E-value=0.2 Score=47.07 Aligned_cols=99 Identities=15% Similarity=0.045 Sum_probs=69.9
Q ss_pred cchhhHHHHHHHHHHHhhhhhhhhHhhHhcCchHHHHHHH-HHHHHHHHHHHhhhHHHHHHHHHHHHHhhcccchHhHHH
Q 014481 148 SSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVL-IWSLATALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATD 226 (423)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~ 226 (423)
..--|.+-++..+...++.+..|++..++.+-.-+.++.+ +...+.++....+++.|..+++.++.+.......+.+..
T Consensus 284 ~vYNG~VeA~~tllgA~~al~~g~v~~~w~~~~~l~l~~~S~l~a~~L~lm~~t~~Iwv~Y~~yIif~~~y~fliTiA~~ 363 (412)
T PF01770_consen 284 SVYNGAVEAASTLLGAIAALLAGYVKVNWDRWGELALGVFSLLQAGLLFLMSFTGNIWVCYAGYIIFRSLYMFLITIASF 363 (412)
T ss_pred cccchHHHHHHHHHHHHHHHHHhHhhcchHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3345888888889999999999999666665444433322 222333334467788898888888888887888888888
Q ss_pred HHHhcCCCCchhhHHHHHHh
Q 014481 227 LIARSIPLEERSRAVSFVFG 246 (423)
Q Consensus 227 ~i~~~~~~~~r~~~~~~~~~ 246 (423)
-++.....+.-|..+|+...
T Consensus 364 qIA~~l~~e~yaLVFGiNtf 383 (412)
T PF01770_consen 364 QIAKNLSEERYALVFGINTF 383 (412)
T ss_pred HHHHhccccceeeeeeeHHH
Confidence 88888876777777776544
No 279
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=94.38 E-value=0.38 Score=44.14 Aligned_cols=39 Identities=10% Similarity=0.072 Sum_probs=36.1
Q ss_pred hhCCChhhHHHHHHHHHHHHHHHHHHHHHHhHHhhhcCC
Q 014481 366 ELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGV 404 (423)
Q Consensus 366 ~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~r~~ 404 (423)
.+|++..+.+.++....+.+++...+.|.+.||+|||+.
T Consensus 63 ~yg~~~~qIa~Lf~~Gf~Ss~i~g~~~G~laD~~Grk~~ 101 (354)
T PF05631_consen 63 SYGFSEHQIAILFVAGFASSAIFGTFVGSLADRYGRKKA 101 (354)
T ss_pred HcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHH
Confidence 589999999999999999999999999999999999854
No 280
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=94.11 E-value=0.63 Score=36.05 Aligned_cols=38 Identities=13% Similarity=0.210 Sum_probs=28.0
Q ss_pred HhhhhhHHHHHHhhHHHhhhccCchHHHHHHHHHHHHH
Q 014481 245 FGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAW 282 (423)
Q Consensus 245 ~~~~~~g~~~g~~~~~~l~~~~gw~~~~~~~~~~~~~~ 282 (423)
.....++..++.++.+.+.|+.|.|..+........+.
T Consensus 4 ~~~~~~~~~~~~~~~g~~~d~~g~~~~~~~~~~~~~~~ 41 (141)
T TIGR00880 4 LAGYALGQLIYSPLSGLLTDRFGRKPVLLVGLFIFVLS 41 (141)
T ss_pred EEeehhHHHHHHhhHHHHHhhcchhHHHHHHHHHHHHH
Confidence 34567788888999999999999888776655544443
No 281
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=94.05 E-value=0.26 Score=47.13 Aligned_cols=65 Identities=11% Similarity=-0.004 Sum_probs=50.2
Q ss_pred HHHHHHHHHHhhcccchHhHHHHHHhcCCCCchhhHHHHHHhhhhhHHHHHHhhHHHhhhccCch
Q 014481 205 GLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWE 269 (423)
Q Consensus 205 ~~~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~ 269 (423)
.+++.-++..+.....+.+.++.-+.+.+|.-=|++|.+.++..++|+---..+.-+++|.+.++
T Consensus 407 lvI~~~~l~sf~stvmFVai~AFharISDP~IGGTYMTLLNTvSNLGGtWP~~~vL~lVD~fT~~ 471 (544)
T PF13000_consen 407 LVIIQHVLSSFMSTVMFVAIMAFHARISDPAIGGTYMTLLNTVSNLGGTWPRTFVLWLVDYFTVA 471 (544)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhccCcccchHHHHHHHHHHhcCCCchHHHHHHHhhhcccc
Confidence 44555667777777888899999999999999999999999999999765555555555554444
No 282
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=93.92 E-value=0.067 Score=46.49 Aligned_cols=101 Identities=16% Similarity=0.140 Sum_probs=55.9
Q ss_pred CchhhHHHHHHhhhhhHHHHHHhhHHHh---hh--ccCchHHHHHHHHHHHHHHHHHHhhccCCcCcCCCCCcchhhhhh
Q 014481 235 EERSRAVSFVFGGLSFGSVAGLLLAPPI---IE--NLGWESVFYIFGLLGIAWFSGFKILQEGETSNGATLAPRSNYINM 309 (423)
Q Consensus 235 ~~r~~~~~~~~~~~~~g~~~g~~~~~~l---~~--~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (423)
++|+....+...++++|.++....--.- .+ ...|++.+.+.+++.++-+++...+-.+-.....+ +++++.
T Consensus 2 k~K~~~s~~n~~gf~iG~ii~~ipF~~~~~~~~~~~~~W~~I~si~~lL~~IpLIly~ifGk~fd~~~~~-~k~~k~--- 77 (267)
T PF07672_consen 2 KKKSILSQFNPWGFNIGTIIVNIPFLISSSVVIALTNNWQWILSIFILLIFIPLILYIIFGKNFDIYSPK-EKQEKE--- 77 (267)
T ss_pred CccceeeeeccccchhhHHHHHhhHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccCcc-cccccc---
Confidence 5666666677777888877764432111 11 23599999998888877666666653322111111 000000
Q ss_pred hhhhhhhHHhhccccCCCcHHHhhhcHHHHHHHHHHHHHH
Q 014481 310 KKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGS 349 (423)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 349 (423)
..+..++....+.+|++..|..++.+....
T Consensus 78 ----------~~~~~~~~s~~~~LK~K~tw~w~~~Yg~wL 107 (267)
T PF07672_consen 78 ----------NSTLSKKPSYKSILKEKETWKWILIYGIWL 107 (267)
T ss_pred ----------cccccccchHHHHHccchHHHHHHHHHHHh
Confidence 001112235688999999887766655443
No 283
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=93.79 E-value=0.95 Score=39.74 Aligned_cols=133 Identities=16% Similarity=0.044 Sum_probs=83.2
Q ss_pred hhHHHHHHHHHHHhhhhhhhhHhhHhcCc--hHHHHHHHHHHHHHHHHHHhhh-------HHHHHHHHHHHHHhhcccch
Q 014481 151 AGLVQSSFFWGYALSQLPGGWLAKIFGGR--KVLQTGVLIWSLATALLPLLAG-------FMPGLVLSRVLVGIGEGVSP 221 (423)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~g~l~dr~G~r--~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~l~G~~~~~~~ 221 (423)
-|.+++.+++..++|+-+..++..|-.+| ..+.+..++.++...+. ..+. +...-+++..+.-.+.|..+
T Consensus 284 hGfiFatFMlASmLGSSla~Rl~s~s~~~ve~ymqivf~vs~a~l~Lp-ilt~~vsP~kes~~~s~i~F~~~E~cvGlfw 362 (454)
T KOG4332|consen 284 HGFIFATFMLASMLGSSLASRLLSRSSPKVESYMQIVFLVSIAALLLP-ILTSSVSPSKESPSESLIGFCLFEACVGLFW 362 (454)
T ss_pred chhHHHHHHHHHHHhhHHHHHHHhcCCcccchHHHHHHHHHHHHHHHH-HHHhccCCCcCCchHHHHHHHHHHHHHhhcc
Confidence 58999999999999999998888775554 34444444443333222 2211 11223445556667778999
Q ss_pred HhHHHHHHhcCCCCchhhHHHHHHhhhhhHHHHHHhhHHHhhhccCchHHHHHHHHHHHHHHH
Q 014481 222 SAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAWFS 284 (423)
Q Consensus 222 ~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~~~~~~~~~~~~~~ 284 (423)
|..+.+=.++.|++.|...+.++..-.++-..++-..--.-....+-|..|-++.+...+..+
T Consensus 363 PSimkmRsqyIPEearstimNfFRvPLnifvClvLynlh~~~~p~~tr~mf~icS~~~~~a~i 425 (454)
T KOG4332|consen 363 PSIMKMRSQYIPEEARSTIMNFFRVPLNIFVCLVLYNLHVDAFPTTTRNMFGICSAFLFVASI 425 (454)
T ss_pred hHHHHHHHhhCCHHHHhhhhhheechhhHhhhhhheecccccCccccchhhhhhHHHHHHHHH
Confidence 999999999999999999999877655554333321100000112456777777666655433
No 284
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=93.64 E-value=0.25 Score=35.01 Aligned_cols=53 Identities=17% Similarity=0.315 Sum_probs=44.4
Q ss_pred HHHHHHHHhhhhHHHHHhhCCChhhHHHHHHHHHHHHHHHHHHHHHHhHHhhhc
Q 014481 349 SWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIAT 402 (423)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~r 402 (423)
..+-+.+...+|...++ .++|..+++++.+...++..+|.+...++.++..++
T Consensus 5 GigRFayTplLP~M~~~-~~ls~~~ag~lasaNy~GYL~GAl~~~~~~~~~~~~ 57 (85)
T PF06779_consen 5 GIGRFAYTPLLPLMQAD-GGLSLSQAGWLASANYLGYLVGALLASRLPRHSRPR 57 (85)
T ss_pred hhHHHHHHhHhHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHH
Confidence 34566677788888876 699999999999999999999999999988875544
No 285
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=93.53 E-value=7.8 Score=37.66 Aligned_cols=74 Identities=19% Similarity=0.149 Sum_probs=57.5
Q ss_pred HHHHHHhhcccchHhHHHHHHhcCC-CCchhhHHHHHHhhhhhHHHHHHhhHHHhhhccCchHHHHHHHHHHHHH
Q 014481 209 SRVLVGIGEGVSPSAATDLIARSIP-LEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAW 282 (423)
Q Consensus 209 ~~~l~G~~~~~~~~~~~~~i~~~~~-~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~~~~~~~~~~~~ 282 (423)
.-++.|+.........-..+.+.+| +++|...+|-+....++..++..++++.+.++.||.....+.-++.++.
T Consensus 272 ~vi~y~~~~nlve~~~k~~v~~~~p~~~~~~~f~g~~~~~~gi~tl~~~l~~~~l~~~~Gw~~~a~i~Pii~lit 346 (472)
T TIGR00769 272 LVIAYGISINLVEVTWKSKLKAQYPSPNEYSAFMGDFSTWTGVVSVTMMLLSGNVIRKYGWLTAALITPLVMLLT 346 (472)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence 3445566666777777778888886 4568999999999888888888888899999999998887776666553
No 286
>KOG3880 consensus Predicted small molecule transporter involved in cellular pH homeostasis (Batten disease protein in human) [General function prediction only]
Probab=92.05 E-value=1.1 Score=40.06 Aligned_cols=65 Identities=22% Similarity=0.085 Sum_probs=52.3
Q ss_pred HhhhHHHHHHHHHHHHHhhcccchHhHHHHHHhcCCCCchhhHHHHHHhhhhhHHHHHHhhHHHh
Q 014481 198 LLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPI 262 (423)
Q Consensus 198 ~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l 262 (423)
.+.+++|..++.-+.-|+-.|..+....--+.+-.++++|..+++.....-.+|..++.+++-.+
T Consensus 337 ~ftpsi~ivf~lI~~EGLlGGasYVNTf~~i~~e~~pd~rEfamsavs~sDS~Gi~lA~~lalpl 401 (409)
T KOG3880|consen 337 WFTPSIWIVFALILFEGLLGGASYVNTFHNIHKETEPDVREFAMSAVSISDSIGIFLAGLLALPL 401 (409)
T ss_pred HhccHHHHHHHHHHHHhhcCchHHHHHHHHHhhcCCchHHHHhHhhheecchhhHHHHHHHhccc
Confidence 35566777777888889888888888777777778889999999999999888888877766443
No 287
>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function. The region concerned is approximately 280 residues long.
Probab=91.91 E-value=7.3 Score=34.19 Aligned_cols=39 Identities=8% Similarity=-0.187 Sum_probs=21.6
Q ss_pred HHHHHHHHHHHHHHHhhhhHHHHHhh----CCChhhHHHHHHH
Q 014481 342 IYAHFCGSWGHYTCLSWLPTYFSEEL----SLNLTEAAWVSIL 380 (423)
Q Consensus 342 ~l~~~~~~~~~~~~~~~~~~~~~~~~----g~s~~~~~~~~~~ 380 (423)
.+...+.....++....=..|++++. |.+.....++++-
T Consensus 184 G~~LAv~aGvlyGs~fvPv~Yi~~~~~~y~~as~~~ldYvFs~ 226 (254)
T PF07857_consen 184 GIILAVFAGVLYGSNFVPVIYIQDHPDIYPGASQNGLDYVFSH 226 (254)
T ss_pred hHHHHHHHHHHHhcccchHHHHHhCccccCCCCCcchheeHHH
Confidence 34444445566776666667777753 3444444444443
No 288
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=91.64 E-value=1.3 Score=42.06 Aligned_cols=128 Identities=18% Similarity=0.045 Sum_probs=78.2
Q ss_pred hHHHHHHHHHHHhhhhhhhhHhhHhcCchHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhhcccchHhHHHHHHhc
Q 014481 152 GLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARS 231 (423)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~i~~~ 231 (423)
.|-..++.+...+.+....++.+|+|-|+.+..+...+.++..+.+ ...+.+....-+-..|+-.+......+..++.+
T Consensus 335 ~~GL~ins~~lgi~S~~~~~l~~~~g~r~~y~~~~~~f~~~~~~~g-l~~~~~~~~~~~~~~G~~~~~~~~~p~~l~~~y 413 (498)
T KOG0637|consen 335 CLGLMLNSIVLGIYSLLVEKLSRKFGTRKRYWGGVNAFGLATGLAG-LVLNTYVVLSHRSTAGILSSPLLTVPYGALALY 413 (498)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHhcCcceEEeehhHHHHHHHHHHh-hhhhHHHHHHHHhhcceeecchhcccHHHHHHH
Confidence 4666778888889999999999999966666666554555554442 334445556666666654444444433333332
Q ss_pred CC-----------------------CCchhhHHHHHHhhhhhHHHHHHhhHHHhhhccC-chHHHHHHHHHHH
Q 014481 232 IP-----------------------LEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLG-WESVFYIFGLLGI 280 (423)
Q Consensus 232 ~~-----------------------~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g-w~~~~~~~~~~~~ 280 (423)
.. ...+|...|+.+....+..++..+..|.+.+..| -+.+-.+.++.++
T Consensus 414 ~~~g~~~a~t~~~pf~~~s~~~~~sg~g~G~~~gvln~~I~ipQvivs~~~Gp~~~~~G~~~~~~~~~~a~s~ 486 (498)
T KOG0637|consen 414 AILGIPLAITFSIPFALASIEIGNSGLGQGLDLGVLNCAIVIPQVLVSLGLGPLDQLFGGGNLPAFVSGAVAL 486 (498)
T ss_pred HHhCCccccccccccccccccccCccCCCCceeeeeeeeeeehhheeeccccchhhhcCCcchhHHHHHHHHH
Confidence 21 1124566677778888888887777777776654 3444444444433
No 289
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=91.27 E-value=0.36 Score=45.11 Aligned_cols=109 Identities=16% Similarity=0.024 Sum_probs=71.3
Q ss_pred hhHHHHH-HHHHHHhhhhhhhhHhhHhcCchHHHHHHHHHHHHHHHHHH------hhhHHHHHHHHHHHHHhhcccchHh
Q 014481 151 AGLVQSS-FFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPL------LAGFMPGLVLSRVLVGIGEGVSPSA 223 (423)
Q Consensus 151 ~~~~~~~-~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~l~G~~~~~~~~~ 223 (423)
.-..... +.+...+|.+.+.++-+.-.|+..+....=+..+-.+.++- .-.+-+++++.-.+.|+..|-....
T Consensus 284 ~~~~~~l~fN~~d~vG~~~a~~~~~~~~r~l~i~v~lR~lfiPlF~~cn~~~~~v~~~~~~~~~~l~~~lglsnGYltsl 363 (406)
T KOG1479|consen 284 ALLLVFLSFNVFDLIGSILAALLTWPDPRKLTIPVLLRLLFIPLFLLCNYPPLPVVFESDGWFIFLMSLLGLSNGYLTSL 363 (406)
T ss_pred HHHHHHHHhHHHHHhhhhhhhcccCCCCceehHHHHHHHHHHHHHHHhccCCCCceecCchHHHHHHHHHHhccchHhhh
Confidence 3444445 77888888776666655533333322222222233322111 1223367788889999999999999
Q ss_pred HHHHHHhcCCCCchhhHHHHHHhhhhhHHHHHHhhH
Q 014481 224 ATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLA 259 (423)
Q Consensus 224 ~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~ 259 (423)
.+.+..+..+++++..+-.+.......|..+|..++
T Consensus 364 ~m~~aPk~v~~~e~e~aG~~m~~fl~~Gl~~G~~~s 399 (406)
T KOG1479|consen 364 IMMYAPKQVKPSEKEAAGNLMVFFLVGGLALGSLLS 399 (406)
T ss_pred eehhcCCCCChHHHHHHHHHHHHHHHHHHHHhhHHH
Confidence 999999999988888888888888888877776664
No 290
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=91.24 E-value=16 Score=35.80 Aligned_cols=75 Identities=13% Similarity=0.142 Sum_probs=55.2
Q ss_pred HHHHHHhhcccchHhHHHHHHhcCC-CCchhhHHHHHHhhhhhHHHHHHhhHHHhhhccCchHHHHHHHHHHHHHH
Q 014481 209 SRVLVGIGEGVSPSAATDLIARSIP-LEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAWF 283 (423)
Q Consensus 209 ~~~l~G~~~~~~~~~~~~~i~~~~~-~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~~~~~~~~~~~~~ 283 (423)
.-+..|+.........-..+.+.+| ++++...+|-++...++-.++-.++++.+.++.||+....+.-++.++..
T Consensus 288 lvi~Ygi~inLvE~~wK~~lk~~~~~~~~ysafmG~~~~~tGivtii~~~l~~~iir~~GW~~~AlitPiv~lit~ 363 (491)
T PF03219_consen 288 LVIAYGISINLVEVVWKSQLKQLYPDPNDYSAFMGKFSSWTGIVTIIMMFLSSNIIRRFGWRTAALITPIVILITG 363 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhHHHHHHHH
Confidence 3344566666666666777777776 45678888888888888777777889999999999988877655554443
No 291
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=90.51 E-value=4.1 Score=39.39 Aligned_cols=97 Identities=15% Similarity=-0.049 Sum_probs=70.3
Q ss_pred hhHHHHHHHHHHHhhhhhhhhHhhHhcCchHHHHH--HHHHHHHHHHHHHhhhHHHHHHHHHHHHHhhcccchHhHHHHH
Q 014481 151 AGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTG--VLIWSLATALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLI 228 (423)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~i 228 (423)
-|.+-++..+..++.++..|++-.++.+---+.++ .++.+ +.++....+++.|..+++.++.+.......+.+..-+
T Consensus 300 NG~veA~~tllga~~a~~ag~~~~~w~~~~~l~l~v~s~~~~-gll~~m~~t~~Iw~~Y~~yvlf~~~y~flitia~~~i 378 (511)
T TIGR00806 300 NGAVDAASTLLGAITSFIAGFVNIRWARWSKLLIAVVSAIQA-GLVFWMSQSHDIWVLYVTYVLFRGIYQFLVPIATFQI 378 (511)
T ss_pred CCHHHHHHHHHHHHHHHHHHhhcCCchhhHHHHHHHHHHHHH-HHhhhhhcccchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 46777777888888899999986665432223222 22222 2334446778899999999999999999999999999
Q ss_pred HhcCCCCchhhHHHHHHhhh
Q 014481 229 ARSIPLEERSRAVSFVFGGL 248 (423)
Q Consensus 229 ~~~~~~~~r~~~~~~~~~~~ 248 (423)
+.....+..|..+|+.....
T Consensus 379 A~~L~~~~~aLvFGiNtfvA 398 (511)
T TIGR00806 379 ASSLSKELCALVFGINTFVA 398 (511)
T ss_pred HHHhcccceEEEEecHHHHH
Confidence 99988777788888866543
No 292
>PF06912 DUF1275: Protein of unknown function (DUF1275); InterPro: IPR010699 This family consists of several hypothetical bacterial proteins of around 200 residues in length. The function of this family is unknown although a few members are thought to be membrane proteins.
Probab=86.35 E-value=20 Score=30.55 Aligned_cols=51 Identities=16% Similarity=0.222 Sum_probs=28.2
Q ss_pred hcCCCCchhhHHHHHHhhhhhHHHHHHhhHHHhhhccCchHHHHHHHHHHHH
Q 014481 230 RSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIA 281 (423)
Q Consensus 230 ~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~~~~~~~~~~~ 281 (423)
++...+++.+.-.......-++..+|..+++.+.+..+. +..++.+++.++
T Consensus 153 ~~~~~~~~~~~~~~~~~~~i~~f~~Ga~~ga~l~~~~~~-~al~~~~~~l~~ 203 (209)
T PF06912_consen 153 RYLRGKDRALRRALRYLLIILSFFIGAILGALLYRRLGF-WALLLPALLLLL 203 (209)
T ss_pred HHHhCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-HHHHHHHHHHHH
Confidence 333334433344455566666677777777777777674 444444444333
No 293
>COG4262 Predicted spermidine synthase with an N-terminal membrane domain [General function prediction only]
Probab=85.74 E-value=29 Score=32.01 Aligned_cols=153 Identities=18% Similarity=0.136 Sum_probs=84.6
Q ss_pred hhhhhHHHhhhhh-CCCcchhhHHHHHHHHHHHhhhhhhhhHhhHhcCchHH----HHHHHHHHHHHHHHHHhh----hH
Q 014481 132 NLSVAIIPMSHRF-GWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVL----QTGVLIWSLATALLPLLA----GF 202 (423)
Q Consensus 132 ~~~~~~~~~~~~~-~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~----~~~~~~~~~~~~~~~~~~----~~ 202 (423)
.+-..+..+..++ |-+--+.+.+.+.|...+.+|+...-++.|.--.-+.+ ++|++.-.-..++...++ ++
T Consensus 25 vyElal~tLatyLlG~~Ilq~S~Iia~yl~amGlGs~~sry~~dd~~~~~Fv~vElllgligg~Sa~~ly~~FA~~~~~~ 104 (508)
T COG4262 25 VYELALGTLATYLLGGGILQTSLIIAGYLAAMGLGSLLSRYVLDDAALARFVDVELLLGLIGGVSAAALYLLFALESAPS 104 (508)
T ss_pred HHHHHHHHHHHHhcCCceeehHHHHHHHHHHhchhhhhhccccCchHHHHHHHHHHHHHHhccchHHHHHHHHHhccchH
Confidence 3333444454443 56677889999999999999999888887743222111 112111000111111122 34
Q ss_pred HHHHHHHHHHHHhhcccchHhHHHHHHhcCCCCchhhHHHHHHhhhhhHHHHHHhhHHHhh-hccCchHHHHHHHHHHHH
Q 014481 203 MPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPII-ENLGWESVFYIFGLLGIA 281 (423)
Q Consensus 203 ~~~~~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~-~~~gw~~~~~~~~~~~~~ 281 (423)
-+.+++.-++.|.-.|.-.|..+.++..-. .+-....+.....-.+|.+.|.++-.++. ...|.--.-...+++.++
T Consensus 105 ~~Vly~lt~vIG~LVG~EiPL~mrml~~r~--a~~k~~~s~vl~~DYLGal~~gLl~p~lllP~LGl~rta~laG~~Nl~ 182 (508)
T COG4262 105 RLVLYALTAVIGVLVGAEIPLLMRMLQRRQ--AKAKDLGSRVLTLDYLGALAGGLLWPFLLLPRLGLVRTAALAGLCNLA 182 (508)
T ss_pred HHHHHHHHHHHHHHHhcchHHHHHHHHHHH--HHHHhhhhhhhhhHhhhhhhHHHHHHHHHhhhhccHHHHHHHHHHHHH
Confidence 467778888999988999999998887622 11122222233335566666665555433 445544344455555555
Q ss_pred HHHHH
Q 014481 282 WFSGF 286 (423)
Q Consensus 282 ~~~~~ 286 (423)
.++..
T Consensus 183 aAvv~ 187 (508)
T COG4262 183 AAVVT 187 (508)
T ss_pred HHHHH
Confidence 44333
No 294
>COG1230 CzcD Co/Zn/Cd efflux system component [Inorganic ion transport and metabolism]
Probab=85.57 E-value=27 Score=31.44 Aligned_cols=146 Identities=14% Similarity=0.129 Sum_probs=69.9
Q ss_pred HHHHHHHHHHHHhhhhhhhhhHHHhhhhhCCCcchhhHHHHHHHHHHHhhhhhhhhHhhH---hcCchHHHHHHHHHHHH
Q 014481 116 IGTTSLAFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKI---FGGRKVLQTGVLIWSLA 192 (423)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr---~G~r~~~~~~~~~~~~~ 192 (423)
.+.+..++++.-+..+.....+..+.+..|+.....++..+...... ..+-.++ ||.||.=+++..+.++.
T Consensus 27 ~~~L~~~f~~iE~i~g~~s~SlaLLADa~Hml~D~~al~lal~A~~~------a~r~~~~~~TfGy~R~eiLaa~~nav~ 100 (296)
T COG1230 27 ALLLNLAFMLIEIIGGLLTGSLALLADALHMLSDALALLLALIAIKL------ARRPATKRFTFGYKRLEILAAFLNALL 100 (296)
T ss_pred HHHHHHHHHHHHHHHHHHhccHHHHHhHHHHHHHHHHHHHHHHHHHH------hcCCCCCCCCccHhHHHHHHHHHHHHH
Confidence 33444445555555566666677788888876666665555443332 2222222 67777766666655554
Q ss_pred HHHHHHhh--hHH----------HHHHHHHHHHHhhcccchHhHHHHHHhcCCCCchhhHHHHHHhhhhhHHHHHHhhHH
Q 014481 193 TALLPLLA--GFM----------PGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAP 260 (423)
Q Consensus 193 ~~~~~~~~--~~~----------~~~~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~ 260 (423)
.+..+.+- ..+ ...++.-.+.|+.. ....+++-.--..+....--+......-.-+-+|-++++
T Consensus 101 Li~~s~~I~~EAi~R~~~P~~i~~~~ml~va~~GL~v----N~~~a~ll~~~~~~~lN~r~a~LHvl~D~Lgsv~vIia~ 176 (296)
T COG1230 101 LIVVSLLILWEAIQRLLAPPPIHYSGMLVVAIIGLVV----NLVSALLLHKGHEENLNMRGAYLHVLGDALGSVGVIIAA 176 (296)
T ss_pred HHHHHHHHHHHHHHHhcCCCCCCccchHHHHHHHHHH----HHHHHHHhhCCCcccchHHHHHHHHHHHHHHHHHHHHHH
Confidence 43332211 000 01111112222221 111122211111123444444555544445556667777
Q ss_pred HhhhccCchHH
Q 014481 261 PIIENLGWESV 271 (423)
Q Consensus 261 ~l~~~~gw~~~ 271 (423)
.+...+||.|.
T Consensus 177 i~i~~~~w~~~ 187 (296)
T COG1230 177 IVIRFTGWSWL 187 (296)
T ss_pred HHHHHhCCCcc
Confidence 77777788874
No 295
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=84.43 E-value=16 Score=32.13 Aligned_cols=72 Identities=17% Similarity=0.193 Sum_probs=38.1
Q ss_pred hHHHHHHHHHHHhhhhhhhhHhhHh-cCchHHHH----HHHHHHHHHHHHHHhh-h---HHHHHHHHHHHHHhhcccchH
Q 014481 152 GLVQSSFFWGYALSQLPGGWLAKIF-GGRKVLQT----GVLIWSLATALLPLLA-G---FMPGLVLSRVLVGIGEGVSPS 222 (423)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~g~l~dr~-G~r~~~~~----~~~~~~~~~~~~~~~~-~---~~~~~~~~~~l~G~~~~~~~~ 222 (423)
....-++..+..+|....|.+...- .||+.+.. +.+++.+..++..... + ....+++.-++.|++.=+.++
T Consensus 144 ~~~~I~fv~g~~~G~~~ig~~nkt~~kRk~fi~~~~~~gi~~~~l~~~~~~~~g~~~~~~~~~f~I~~Fl~G~f~WgiQ~ 223 (267)
T PF07672_consen 144 PIFQILFVAGYFLGPFTIGLWNKTNYKRKPFIHFIISLGIVFFVLSIVVVYFVGPGNAAGFAFFYIFGFLAGFFLWGIQG 223 (267)
T ss_pred HHHHHHHHHHHhhhceeeccchhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHhhhH
Confidence 3444567777778888888887754 44444332 2233333222211111 1 245577777788876544444
Q ss_pred h
Q 014481 223 A 223 (423)
Q Consensus 223 ~ 223 (423)
+
T Consensus 224 V 224 (267)
T PF07672_consen 224 V 224 (267)
T ss_pred H
Confidence 3
No 296
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=83.97 E-value=1.9 Score=40.04 Aligned_cols=63 Identities=8% Similarity=-0.124 Sum_probs=51.0
Q ss_pred HHHHHHhhcccchHhHHHHHHhcCCCCchhhHHHHHHhhhhhHHHHHHhhHHHhhhccCchHH
Q 014481 209 SRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESV 271 (423)
Q Consensus 209 ~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~ 271 (423)
...+.+...-..+...++..+++.+|.--|+.|.+.++..++|+---..+..++.|..+|+-+
T Consensus 375 ~y~~~~~~~ts~fv~~maf~aqisdp~iggTymTlLNTLsnLGg~wp~tv~l~l~D~ltv~~C 437 (510)
T KOG3574|consen 375 SYAFHQVFVTSMFVSGMAFHAQISDPAIGGTYMTLLNTLSNLGGNWPGTVALWLADGLTVKQC 437 (510)
T ss_pred HHHHhhhHHHHHHHHHHHHHhhcCCcccCccHHHHHHHHHHhcCCcHHHHHHHhcccCceeec
Confidence 345555555666777889999999999999999999999999988888888888887776643
No 297
>KOG3810 consensus Micronutrient transporters (folate transporter family) [Coenzyme transport and metabolism]
Probab=81.14 E-value=23 Score=32.77 Aligned_cols=130 Identities=17% Similarity=0.116 Sum_probs=82.2
Q ss_pred hHHHHHHHHHHHhhhhhhhhHhhHhcCchHHH--HHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhhcccchHhHHHHHH
Q 014481 152 GLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQ--TGVLIWSLATALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIA 229 (423)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~i~ 229 (423)
|..-++..+..+++.+..|.+--++.|..-++ ++.+.. .+.+....-+++.|...++.++...-.....+.+...++
T Consensus 274 G~veAv~tlLGa~~~~~~g~l~i~w~r~g~~ll~~~s~~~-agllf~m~~t~~Iw~~Ya~yvlfr~~y~l~itiA~~~iA 352 (433)
T KOG3810|consen 274 GAVEAVSTLLGAIAALAAGYLNINWNRWGDLLLAVGSAVQ-AGLLFIMAQTQHIWVCYAGYVLFRVIYQLTITIATFQIA 352 (433)
T ss_pred CHHHHHHHHHHHHHHHHHHheeeccchhhHHHHHHHHHHh-hhhhhhhhcccceehhhhhHHHHHhhHhhhhhHHHHHHH
Confidence 56666777788888999999977666653333 333332 233333355677888888888888777777888888888
Q ss_pred hcCCCCchhhHHHHHHhhhhhHHHHHHhhHHHhhhccC-----------chHHHHHHHHHHHHHHHH
Q 014481 230 RSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLG-----------WESVFYIFGLLGIAWFSG 285 (423)
Q Consensus 230 ~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g-----------w~~~~~~~~~~~~~~~~~ 285 (423)
.....+.-|..+|+.... +.++-.++.-.+.|..| +..-|.+.+.+.++....
T Consensus 353 ~nL~~e~~gLvFGiNTFv---Al~lQsilT~iVvd~~g~~L~ir~Q~~~Y~~Yf~v~~~i~~~~~~~ 416 (433)
T KOG3810|consen 353 RNLSSELFGLVFGINTFV---ALILQSILTLIVVDDRGLGLDIRTQFVVYSSYFIVLGVIFLIGFGI 416 (433)
T ss_pred HhhhhhhheeeeehHHHH---HHHHHHhheEEEEcccccCCCcceeEEEEeehHHHHHHHHHHHHHH
Confidence 888877888888876543 23333333333444222 234566667666665443
No 298
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=78.06 E-value=7.7 Score=28.51 Aligned_cols=33 Identities=24% Similarity=0.257 Sum_probs=20.2
Q ss_pred HHHHHhhhhhhhhHhhHh-cCchHHHHHHHHHHH
Q 014481 159 FWGYALSQLPGGWLAKIF-GGRKVLQTGVLIWSL 191 (423)
Q Consensus 159 ~~~~~~~~~~~g~l~dr~-G~r~~~~~~~~~~~~ 191 (423)
+++..+.....||+.||| |-+++.++.+++.+.
T Consensus 52 fIsGilVGa~iG~llD~~agTsPwglIv~lllGf 85 (116)
T COG5336 52 FISGILVGAGIGWLLDKFAGTSPWGLIVFLLLGF 85 (116)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHH
Confidence 344445555679999986 666666655554433
No 299
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=75.33 E-value=4.9 Score=35.30 Aligned_cols=49 Identities=16% Similarity=0.173 Sum_probs=38.5
Q ss_pred HHHHHhhhhHHHHHhhCCChhhHHHHHHHHHHHHHHHHHHHHHHhHHhhhc
Q 014481 352 HYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIAT 402 (423)
Q Consensus 352 ~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~r 402 (423)
.+.+..|-| .+++.+|++..+...+.....++..+| ++.|.+.|++|.+
T Consensus 18 ~Y~Fs~yS~-~Lk~~l~~sq~~l~~l~~~~~~G~~~G-~~~G~l~d~~gp~ 66 (250)
T PF06813_consen 18 TYTFSAYSP-QLKSRLGYSQSQLNTLSTAGDIGSYFG-ILAGLLYDRFGPW 66 (250)
T ss_pred ccchhhhhH-HHHHHhCCCHHHHHHHHHHHHHHhhcc-HHHHHHHHhcchH
Confidence 344444444 455679999999999999999998875 7899999999976
No 300
>PRK10263 DNA translocase FtsK; Provisional
Probab=75.30 E-value=23 Score=38.63 Aligned_cols=26 Identities=23% Similarity=0.156 Sum_probs=15.0
Q ss_pred hhHHHHHHhhHHHhhhccCchHHHHH
Q 014481 249 SFGSVAGLLLAPPIIENLGWESVFYI 274 (423)
Q Consensus 249 ~~g~~~g~~~~~~l~~~~gw~~~~~~ 274 (423)
..|+++|..++..+...+|.....++
T Consensus 141 ~gGGIIG~lLs~lL~~LfG~vGa~LI 166 (1355)
T PRK10263 141 ASGGVIGSLLSTTLQPLLHSSGGTIA 166 (1355)
T ss_pred cccchHHHHHHHHHHHHHhHHHHHHH
Confidence 34666776666666665554444333
No 301
>COG3202 ATP/ADP translocase [Energy production and conversion]
Probab=71.67 E-value=1e+02 Score=30.02 Aligned_cols=82 Identities=16% Similarity=0.051 Sum_probs=58.9
Q ss_pred HHHHHHHHHhhcccchHhHHHHHHhcCCC-CchhhHHHHHHhhhhhH-HHHHHhhHHHhhhccCchHHHHHHHHHHHHHH
Q 014481 206 LVLSRVLVGIGEGVSPSAATDLIARSIPL-EERSRAVSFVFGGLSFG-SVAGLLLAPPIIENLGWESVFYIFGLLGIAWF 283 (423)
Q Consensus 206 ~~~~~~l~G~~~~~~~~~~~~~i~~~~~~-~~r~~~~~~~~~~~~~g-~~~g~~~~~~l~~~~gw~~~~~~~~~~~~~~~ 283 (423)
+...-+..|++........-+-+.+.+|. +++...+|-++...++- .++.-.+++-+++..||-+.-.+.-++.++..
T Consensus 287 ial~vl~Y~v~inLvE~~wKs~ik~~~~~~~~~~~f~~~~~~~tgvv~~v~~~~~~s~~ir~~GW~~~AlitPiv~litg 366 (509)
T COG3202 287 IALLVLAYGVSINLVEGVWKSGIKELYPTTNEYTAFMGRFQIWTGVVSLVVFLFPGSNLIRRVGWFTGALITPLVMLITG 366 (509)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHhhHHHHHHHHHHHHHHHH
Confidence 33444555666667777777777788874 45888888888777776 66677788889999999988887777766654
Q ss_pred HHHH
Q 014481 284 SGFK 287 (423)
Q Consensus 284 ~~~~ 287 (423)
++++
T Consensus 367 ~lFF 370 (509)
T COG3202 367 VLFF 370 (509)
T ss_pred HHHH
Confidence 4443
No 302
>TIGR00927 2A1904 K+-dependent Na+/Ca+ exchanger.
Probab=71.63 E-value=24 Score=36.96 Aligned_cols=50 Identities=12% Similarity=0.112 Sum_probs=29.7
Q ss_pred hhhhHHHhhhhhCCCcchhhHHHHHHHHHHHhhhhhhhhHhhHhcCchHHHH
Q 014481 133 LSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQT 184 (423)
Q Consensus 133 ~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~ 184 (423)
+......+...+|++...+|+.+.+. +..+.-++....+-|-|.-.+.+.
T Consensus 952 lV~~at~IG~vlGIse~VmGlTfLA~--GTSIPDlisSvivArkG~gdMAVa 1001 (1096)
T TIGR00927 952 MVWWAHQVGETIGISEEIMGLTILAA--GTSIPDLITSVIVARKGLGDMAVS 1001 (1096)
T ss_pred HHHHHHHhhhhcCCChhhhhhhhhhh--hcccHHHHHHHHHHHccCCcceee
Confidence 33345557777888887776654433 555556666666666665544433
No 303
>PF12805 FUSC-like: FUSC-like inner membrane protein yccS
Probab=71.39 E-value=26 Score=31.49 Aligned_cols=33 Identities=27% Similarity=0.261 Sum_probs=15.1
Q ss_pred HHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhh
Q 014481 184 TGVLIWSLATALLPLLAGFMPGLVLSRVLVGIG 216 (423)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~ 216 (423)
++.++++++.++..+..++.|.+.+.-++.+++
T Consensus 4 ~~~~~~~~~s~~~~l~~~~~~l~~~~~~~~~F~ 36 (284)
T PF12805_consen 4 ATLLCFALASLLVGLLFPYPWLLILVLALLTFF 36 (284)
T ss_pred HHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHH
Confidence 333444344444444444445555444444444
No 304
>KOG2601 consensus Iron transporter [Inorganic ion transport and metabolism]
Probab=71.20 E-value=55 Score=30.73 Aligned_cols=166 Identities=14% Similarity=0.034 Sum_probs=91.6
Q ss_pred HHHHHHHHHHHHhhhhhhhhhHHHhhhhhCCCc-chhhHHHHHHHHHHHhhhhhhhhHhhHhcCchHHHHHHHHHHHH--
Q 014481 116 IGTTSLAFVICNMDKVNLSVAIIPMSHRFGWNS-SVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLA-- 192 (423)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~-~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~-- 192 (423)
.+.+.+++++...+.-++......++.+++-+. ...+....+-.....+..++.|...|+..|+|++...+++--++
T Consensus 29 ~i~Ly~gy~lt~wgdR~W~F~VsL~M~~L~gnsl~lvAvyglvesgs~lvlg~ivGq~vDg~sr~Kvi~~~L~lqNlSv~ 108 (503)
T KOG2601|consen 29 VIFLYLGYFLTTWGDRMWEFSVSLFMILLGGNSLLLVAVYGLVESGSQLVLGPIVGQWVDGMSRVKVIQTWLLLQNLSVI 108 (503)
T ss_pred eehhhHHHHHhHhhHhHHHHHHHHHHHHHcCceehhHHHHHHHHHhHHHhhHHHHHHHhcchhHHHHHHHHHhhccHHHH
Confidence 345677788877777788777777777766433 33333333444556677788899999999999987765433222
Q ss_pred ----HHHHHHhhh-----HHHHHHHHHHHHHhhcccc--hHhH--HHHHHhcC----CCCchhhHH---HHHHhhhhhHH
Q 014481 193 ----TALLPLLAG-----FMPGLVLSRVLVGIGEGVS--PSAA--TDLIARSI----PLEERSRAV---SFVFGGLSFGS 252 (423)
Q Consensus 193 ----~~~~~~~~~-----~~~~~~~~~~l~G~~~~~~--~~~~--~~~i~~~~----~~~~r~~~~---~~~~~~~~~g~ 252 (423)
.++..+..+ +.+.+..+.++.-...+.. ...+ ..+--||. ..+.+.... +.....-..-.
T Consensus 109 vagglvi~~l~~~~~~~~t~pv~t~~lvLa~~i~aI~~Las~A~~i~i~RDWvvV~s~g~s~s~lt~mnatir~iDq~tn 188 (503)
T KOG2601|consen 109 VAGGLVITLLVHKDLKSATSPVFTVCLVLANLIAAIAVLASLAGTILIERDWVVVMSEGESPSVLTNMNATIRGIDQSTN 188 (503)
T ss_pred HHHHHHhhheeecchhcccccHHHHHHHHHHHHHHHHHHHHhhheEEecccEEEEecCCCCHHHHhhcchhhhhhhhhhh
Confidence 222222222 3455555554443322111 0001 11112232 122233332 44444455567
Q ss_pred HHHHhhHHHhhhccCchHHHHHHHHHHHH
Q 014481 253 VAGLLLAPPIIENLGWESVFYIFGLLGIA 281 (423)
Q Consensus 253 ~~g~~~~~~l~~~~gw~~~~~~~~~~~~~ 281 (423)
++.|.+.|.++...+-|..-.+.++.+.+
T Consensus 189 ~Lapv~tg~Iitfvsl~~~~g~f~~w~~v 217 (503)
T KOG2601|consen 189 LLAPVITGLIITFVSLRASAGTFAAWALV 217 (503)
T ss_pred chhhhhhcccceeechhhhhhhhHHHHHH
Confidence 78899999998887777655555555444
No 305
>PRK00293 dipZ thiol:disulfide interchange protein precursor; Provisional
Probab=70.53 E-value=81 Score=31.71 Aligned_cols=31 Identities=19% Similarity=0.221 Sum_probs=18.3
Q ss_pred ChhhHHHHHHHHHHHHHHHHHHHHHHhHHhh
Q 014481 370 NLTEAAWVSILPPLASVLVTSIAAQFADNLI 400 (423)
Q Consensus 370 s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~ 400 (423)
+....+.++..+++|..+--++.+....++.
T Consensus 323 ~~~~g~~~l~~~gLG~~~Plll~~~~~~~~l 353 (571)
T PRK00293 323 DLLLGGLTLYLLALGMGLPLILITTFGNKLL 353 (571)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 4455566667777777555555555555443
No 306
>PRK03612 spermidine synthase; Provisional
Probab=67.86 E-value=1.3e+02 Score=29.80 Aligned_cols=17 Identities=24% Similarity=0.348 Sum_probs=9.0
Q ss_pred HHHHHHHHHHHhhcccc
Q 014481 204 PGLVLSRVLVGIGEGVS 220 (423)
Q Consensus 204 ~~~~~~~~l~G~~~~~~ 220 (423)
+.++++-++.|++.|..
T Consensus 52 ~~~ii~~fl~glalGs~ 68 (521)
T PRK03612 52 FSTVIGLMLFAMGVGAL 68 (521)
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 34555555566555443
No 307
>KOG1307 consensus K+-dependent Ca2+/Na+ exchanger NCKX1 and related proteins [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=67.38 E-value=50 Score=31.53 Aligned_cols=41 Identities=15% Similarity=0.117 Sum_probs=21.7
Q ss_pred hHHHhhhhhCCCcchhhHHHHHHHHHHHhhhhhhhhHhhHhcC
Q 014481 136 AIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGG 178 (423)
Q Consensus 136 ~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~ 178 (423)
....+.+.+|+++...|+-. ...|..+--++...+..|-|-
T Consensus 446 wa~~iGeT~gIp~eIMGLTi--LAAGTSIPDlitSvIVARKGl 486 (588)
T KOG1307|consen 446 WANIIGETLGIPDEIMGLTI--LAAGTSIPDLITSVIVARKGL 486 (588)
T ss_pred HHHHcccccCCCHHHhhhhh--hhcCCchHHhhHhhhhccccc
Confidence 34456677888877666532 222333333445555555543
No 308
>PF05255 UPF0220: Uncharacterised protein family (UPF0220); InterPro: IPR007919 This family of proteins is functionally uncharacterised.
Probab=66.65 E-value=70 Score=26.10 Aligned_cols=61 Identities=11% Similarity=0.091 Sum_probs=33.5
Q ss_pred CCCCchhhHHHHHHhhhhhHHHHHHhhHHHhhhcc------CchHHHHHHHHHHHHHHHHHHhhccC
Q 014481 232 IPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENL------GWESVFYIFGLLGIAWFSGFKILQEG 292 (423)
Q Consensus 232 ~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~------gw~~~~~~~~~~~~~~~~~~~~~~~~ 292 (423)
++..++.+..+.+..+.-.+...--++=+.+.... .+...+++.++++.+.+++.-.++++
T Consensus 15 ~~~~~~~~~~~~~~AGaLF~~gwWi~iDa~v~s~~~~~~~~~~~f~~~ipgI~stlgm~mvN~V~~~ 81 (166)
T PF05255_consen 15 FDWSEKRNAIGSYVAGALFALGWWIFIDAAVYSKHANGSDVHVTFVDWIPGIFSTLGMFMVNSVSKS 81 (166)
T ss_pred CCchHhHHHHHHHHHHHHHHHHHHHHHHHHHhCCccCCCCccccceeeehHHHHHHHHHHhccccHH
Confidence 34445555555544444444333333333333322 47788888888888777666555443
No 309
>PF02990 EMP70: Endomembrane protein 70; InterPro: IPR004240 The transmembrane 9 superfamily protein (TM9SF) may function as a channel or small molecule transporter. Proteins in this group are endosomal integral membrane proteins.; GO: 0016021 integral to membrane
Probab=64.36 E-value=30 Score=34.30 Aligned_cols=31 Identities=16% Similarity=0.128 Sum_probs=18.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHhHHhhhcCCcc
Q 014481 376 WVSILPPLASVLVTSIAAQFADNLIATGVET 406 (423)
Q Consensus 376 ~~~~~~~~~~~~~~~~~g~l~dr~~~r~~~~ 406 (423)
.......+.+.++...++++...++.++++.
T Consensus 301 ~~i~~y~~~~~iaGy~S~~~yk~~~g~~W~~ 331 (521)
T PF02990_consen 301 AAIILYALTSFIAGYVSARLYKSFGGKKWKK 331 (521)
T ss_pred HHHHHHHHHhhHHHHHHHHHHHHcCCCceee
Confidence 3444555666666666677777776665543
No 310
>PF01733 Nucleoside_tran: Nucleoside transporter; InterPro: IPR002259 Delayed-early response (DER) gene products include growth progression factors and several unknown products of novel cDNAs. Murine and human cDNAs from one novel DER gene (DER12) have been characterised to identify its product and to examine its role in the growth response []. Both sequences encode a hydrophobic 36kDa protein that is predicted to contain 8 transmembrane (TM) domains. The protein has been localised to the nucleolus, where its concentration increases following mitogen stimulation []. Although the function of the protein is unknown, its identification as a nucleolar gene transcriptionally activated by growth factors implicates it as participating in the proliferative response []. Sequence analysis reveals the protein to share a high degree of similarity with the C-terminal portion of equilibrative nucleoside transporters. These proteins are integral membrane proteins which enable the movement of hydrophilic nucleosides and nucleoside analogs down their concentration gradients across cell membranes. ENT family members have been identified in humans, mice, fish, tunicates, slime molds, and bacteria []. ; GO: 0005337 nucleoside transmembrane transporter activity, 0006810 transport, 0016020 membrane; PDB: 1HXI_A.
Probab=62.97 E-value=2.4 Score=38.71 Aligned_cols=21 Identities=14% Similarity=-0.009 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHh
Q 014481 376 WVSILPPLASVLVTSIAAQFA 396 (423)
Q Consensus 376 ~~~~~~~~~~~~~~~~~g~l~ 396 (423)
..+..++++-.+|+.+.++..
T Consensus 186 ~~fl~Fn~gD~iGR~l~~~~~ 206 (309)
T PF01733_consen 186 VLFLLFNLGDFIGRFLASWPR 206 (309)
T ss_dssp ---------------------
T ss_pred HHHHHHHHHHHhcchhcceeE
Confidence 356678999999999888743
No 311
>PF02535 Zip: ZIP Zinc transporter; InterPro: IPR003689 These ZIP zinc transporter proteins define a family of metal ion transporters that are found in plants, protozoa, fungi, invertebrates, and vertebrates, making it now possible to address questions of metal ion accumulation and homeostasis in diverse organisms [].; GO: 0046873 metal ion transmembrane transporter activity, 0030001 metal ion transport, 0055085 transmembrane transport, 0016020 membrane
Probab=61.42 E-value=1.3e+02 Score=27.35 Aligned_cols=27 Identities=19% Similarity=0.336 Sum_probs=11.8
Q ss_pred HHHHHHHHhhcccc-hHhHHHHHHhcCC
Q 014481 207 VLSRVLVGIGEGVS-PSAATDLIARSIP 233 (423)
Q Consensus 207 ~~~~~l~G~~~~~~-~~~~~~~i~~~~~ 233 (423)
.+..++.+++.|.+ +....-++.+...
T Consensus 264 ~~~~~~~a~aaG~~lyv~~~ell~~~~~ 291 (317)
T PF02535_consen 264 IVSGILLAFAAGTFLYVAFVELLPEEFH 291 (317)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 33445555554433 3333334444444
No 312
>PF06638 Strabismus: Strabismus protein; InterPro: IPR009539 This family consists of several strabismus (STB) or Van Gogh-like (VANGL) proteins 1 and 2. The exact function of this family is unknown. It is thought, however that STB1 gene and STB2 may be potent tumour suppressor gene candidates [].; GO: 0007275 multicellular organismal development, 0016021 integral to membrane
Probab=54.81 E-value=1.2e+02 Score=29.55 Aligned_cols=13 Identities=15% Similarity=-0.292 Sum_probs=9.5
Q ss_pred hhHHHHHHHHHHH
Q 014481 200 AGFMPGLVLSRVL 212 (423)
Q Consensus 200 ~~~~~~~~~~~~l 212 (423)
.-.+|.+++.|++
T Consensus 178 ~~syWLFY~vrIl 190 (505)
T PF06638_consen 178 LFSYWLFYGVRIL 190 (505)
T ss_pred HHHHHHHhhheee
Confidence 3456888888876
No 313
>PF11151 DUF2929: Protein of unknown function (DUF2929); InterPro: IPR021324 This family of proteins with unknown function appears to be restricted to Firmicutes.
Probab=49.61 E-value=70 Score=20.71 Aligned_cols=45 Identities=13% Similarity=0.177 Sum_probs=25.1
Q ss_pred hhhHHHHHHhhHHHhhhccCchHHHHHHHHHHHHHHHHHHhhccC
Q 014481 248 LSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAWFSGFKILQEG 292 (423)
Q Consensus 248 ~~~g~~~g~~~~~~l~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~ 292 (423)
.-+|.++|.+.+......+++....++..+.+++..++...++++
T Consensus 11 ~il~~vvgyI~ssL~~~~~n~~~~~Ii~vi~~i~~~~~~~~i~~~ 55 (57)
T PF11151_consen 11 FILGEVVGYIGSSLTGVTYNFTTAAIIAVIFGIIVANIIAVIPKK 55 (57)
T ss_pred HHHHHHHHHHHHHHhCCCCChHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 345555665555544445566666666666666655555455443
No 314
>TIGR01666 YCCS hypothetical membrane protein, TIGR01666. This model represents a clade of sequences from gamma and beta proteobacteria. These proteins are 700 amino acids long and many have been annotated as putative membrane proteins. The gene from Salmonella has been annotated as a putative efflux transporter. The gene from E. coli has the name yccS.
Probab=49.37 E-value=74 Score=32.84 Aligned_cols=41 Identities=20% Similarity=0.137 Sum_probs=26.1
Q ss_pred cCchHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhhc
Q 014481 177 GGRKVLQTGVLIWSLATALLPLLAGFMPGLVLSRVLVGIGE 217 (423)
Q Consensus 177 G~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~ 217 (423)
||.+-++++.++++++++...+..+..|.+....++.+++.
T Consensus 55 ~R~~~l~~t~~~f~i~sl~v~ll~~~p~lf~~~l~~~tf~~ 95 (704)
T TIGR01666 55 GRLKNVIFTLICFSIASFSVELLFGKPWLFAVGLTVSTFGF 95 (704)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHH
Confidence 55666777777777777666555565566666555555553
No 315
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=49.27 E-value=47 Score=29.09 Aligned_cols=52 Identities=17% Similarity=0.007 Sum_probs=37.6
Q ss_pred HHHHHHHhhhhHHHHHhhCCCh--hhHHHHHHHHHHHHHHHHHHHHHHhHHhhhc
Q 014481 350 WGHYTCLSWLPTYFSEELSLNL--TEAAWVSILPPLASVLVTSIAAQFADNLIAT 402 (423)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~g~s~--~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~r 402 (423)
..........+.+..+ .+.+. ...++......+...++.++.|++.||.|+|
T Consensus 16 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~ 69 (338)
T COG0477 16 LDLGLLSPALPLLLST-LSLSSGRLLYGLLLSAFFLGYAIGSLLAGPLGDRYGRR 69 (338)
T ss_pred HhcchHHHHHHHHHHH-cCCCchhHHHHHHHHHHHHHHHHHhhhhhhccccccch
Confidence 3334444555666654 34444 4678888888999999999999999999877
No 316
>PF11947 DUF3464: Protein of unknown function (DUF3464); InterPro: IPR021855 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 137 to 196 amino acids in length.
Probab=48.74 E-value=27 Score=27.92 Aligned_cols=47 Identities=17% Similarity=0.198 Sum_probs=31.1
Q ss_pred HHHHHHHHHHhhcccchHhHHHHHHhcCCCCchhhHHHHHHhhhhhHHHH
Q 014481 205 GLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVA 254 (423)
Q Consensus 205 ~~~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~ 254 (423)
.+++...+.|+| ...+.+.+++.-+++++-|..+|+-..-.+++-+.
T Consensus 99 ~~~~S~~~Fg~g---llGisYGilSaSWD~~r~GSllG~~e~~~N~~r~~ 145 (153)
T PF11947_consen 99 VLLVSLVFFGLG---LLGISYGILSASWDPEREGSLLGWEEFKRNWGRMW 145 (153)
T ss_pred HHHHHHHHHHHH---HHhhhhhhcccccCCCCCCCcccHHHHHHhHHHHH
Confidence 344444444443 23445677777788888999999988888876543
No 317
>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]
Probab=47.60 E-value=1.2e+02 Score=22.67 Aligned_cols=49 Identities=20% Similarity=0.062 Sum_probs=27.4
Q ss_pred hhhhHhhHhcCchHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhh
Q 014481 168 PGGWLAKIFGGRKVLQTGVLIWSLATALLPLLAGFMPGLVLSRVLVGIG 216 (423)
Q Consensus 168 ~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~ 216 (423)
..-+.+|.+.|+...+...+.+.++..+++..-.+.+.=.+--+..|+|
T Consensus 19 ~~lK~s~gf~~~~~~il~~v~~~~sf~~Ls~alk~ipvgvAYAiW~GiG 67 (106)
T COG2076 19 TLLKYSDGFTRLWPSILTIVGYGLSFYLLSLALKTIPLGVAYAIWTGIG 67 (106)
T ss_pred HHHHHHhcccccchHHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHH
Confidence 3456677777777777766666666555543333333333334444554
No 318
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]
Probab=47.11 E-value=52 Score=33.05 Aligned_cols=64 Identities=16% Similarity=0.160 Sum_probs=54.5
Q ss_pred HHHHHHHHHHHHHhhcccchHhHHHHHHhcCCCCchhhHHHHHHhhhhhHHHHHHhhHHHhhhc
Q 014481 202 FMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIEN 265 (423)
Q Consensus 202 ~~~~~~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~ 265 (423)
+.++++--.++.|++.........-+.-+-+|++-|..+.+++....++|..+..++.......
T Consensus 457 Si~W~iPQyvLig~~Evf~~vg~lEFfY~qaP~sMkS~~~al~l~t~a~G~~lss~Lv~~v~~~ 520 (571)
T KOG1237|consen 457 SILWQIPQYVLLGAGEVFTSVGGLEFFYSQAPESMKSVATALWLLTVAVGNYLSSVLVSLVQFS 520 (571)
T ss_pred eHHHHHHHHHHHHHHHHHHhhhhHHHhHhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 3556777889999999888888888888889999999999999999999999999988665543
No 319
>PTZ00370 STEVOR; Provisional
Probab=46.07 E-value=34 Score=30.30 Aligned_cols=40 Identities=10% Similarity=0.057 Sum_probs=21.1
Q ss_pred HHHhhHHHhhhccCchHHHHHHHHHHHHHHHHHHhhccCC
Q 014481 254 AGLLLAPPIIENLGWESVFYIFGLLGIAWFSGFKILQEGE 293 (423)
Q Consensus 254 ~g~~~~~~l~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (423)
+|+..+........|..+-++..+++++++++..++.+++
T Consensus 243 agtAAtaAsaaF~Pygiaalvllil~vvliilYiwlyrrR 282 (296)
T PTZ00370 243 AGTAASAASSAFYPYGIAALVLLILAVVLIILYIWLYRRR 282 (296)
T ss_pred cchHHHHHHHhhcccHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 3444333333334566666666666666655555554433
No 320
>TIGR01667 YCCS_YHJK integral membrane protein, YccS/YhfK family. TMHMM on members of this model shows a consensus of 11 transmembrane helices separated into two clusters, an N-terminal cluster of 6 and a central cluster of 5. This would indicate two non-membrane domains one on each side of the membrane
Probab=45.73 E-value=1.4e+02 Score=31.00 Aligned_cols=41 Identities=24% Similarity=0.120 Sum_probs=27.0
Q ss_pred cCchHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhhc
Q 014481 177 GGRKVLQTGVLIWSLATALLPLLAGFMPGLVLSRVLVGIGE 217 (423)
Q Consensus 177 G~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~ 217 (423)
||.+-++++.++++++++...+..+..|.+....++.+++.
T Consensus 55 ~R~~~l~it~~~f~i~sl~v~ll~~~p~~~~~~l~~~tf~~ 95 (701)
T TIGR01667 55 GRLKNLIITLSCFSIASFLVQLLFPKPWLFPFLLTLLTFGF 95 (701)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHH
Confidence 55677778888888877776555565566665555555553
No 321
>PF11299 DUF3100: Protein of unknown function (DUF3100); InterPro: IPR021450 Some members in this family of proteins are annotated as membrane proteins however this cannot be confirmed. Currently no function is known.
Probab=44.41 E-value=29 Score=29.76 Aligned_cols=93 Identities=22% Similarity=0.217 Sum_probs=53.2
Q ss_pred hhhhHhhHhcCc-----h---HHHHHHHHHHHHHHHHHH-hh-hHHHHHHHHHHHHHhhcccchHhHHHHHHhcCCCCch
Q 014481 168 PGGWLAKIFGGR-----K---VLQTGVLIWSLATALLPL-LA-GFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEER 237 (423)
Q Consensus 168 ~~g~l~dr~G~r-----~---~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r 237 (423)
=.+.+.||||-+ - ++++|.++-++..-+++. .. -.+..-.+...-.|+|.+..+.++.+-+.+.+| +..
T Consensus 126 ~laiI~ekYGldSpEgrGVl~~Yi~GTvfGtiffsllas~~a~~~~fhP~ALAMasGvGSgSMMaAa~~aL~~~~P-~~a 204 (241)
T PF11299_consen 126 NLAIISEKYGLDSPEGRGVLGVYIIGTVFGTIFFSLLASLLASLGIFHPYALAMASGVGSGSMMAAASGALAAAYP-EMA 204 (241)
T ss_pred ceeeeehhcCCCCccccceEEEeeehhhHHHHHHHHHHHHHHhccCCCHHHHHHHcCCcHHHHHHHHHHHHHHHCc-chH
Confidence 346788998753 2 234444333332222211 11 111122345566789988888888888888887 666
Q ss_pred hhHHHHHHhhhhhHHHHHHhhHHH
Q 014481 238 SRAVSFVFGGLSFGSVAGLLLAPP 261 (423)
Q Consensus 238 ~~~~~~~~~~~~~g~~~g~~~~~~ 261 (423)
....++-...+-+..+.|-.+.-+
T Consensus 205 ~~i~A~AaaSNllt~~~G~Y~~if 228 (241)
T PF11299_consen 205 DQILAFAAASNLLTSVTGLYMSIF 228 (241)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 667776666666655555444433
No 322
>TIGR03173 pbuX xanthine permease. All the seed members of this model are observed adjacent to genes for either xanthine phosphoribosyltransferase (for the conversion of xanthine to guanine, GenProp0696, ) or genes for the conversion of xanthine to urate and its concomitant catabolism (GenProp0640, GenProp0688, GenProp0686 and GenProp0687). A number of sequences scoring higher than trusted to this model are found in different genomic contexts, and the possibility exist that these transport related compounds in addition to or instead of xanthine itself. The outgroup to this family are sequences which are characterized as uracil permeases or are adjacent to established uracil phosphoribosyltransferases.
Probab=43.45 E-value=3e+02 Score=26.25 Aligned_cols=98 Identities=12% Similarity=0.083 Sum_probs=56.0
Q ss_pred hhhhCCCcchhhHHHHHHHHHHHhhhhhhhhHhhHhcCchHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhhcccc
Q 014481 141 SHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPLLAGFMPGLVLSRVLVGIGEGVS 220 (423)
Q Consensus 141 ~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~ 220 (423)
.+..|++.++...+.+...+...++.++-.+-.-++|.|..+..+.....+...........+...+.+-++.|+-.-..
T Consensus 20 ~~a~gl~~~~~~~~i~at~l~sgi~tllq~~~~~~~G~~~P~~~g~s~a~~~~~~~~~~~~~~~~~~ga~~v~Gii~ill 99 (406)
T TIGR03173 20 GGALGLSAEQTAYLISADLFACGIATLIQTLGIGPFGIRLPVVQGVSFAAVGPMIAIGAGGGLGAIFGAVIVAGLFVILL 99 (406)
T ss_pred HhhcCCCHHHHHHHHHHHHHHHHHHHHHHhccccccCCccceeecCcHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHH
Confidence 34568998888888888888888888876433335777777766654433332222112223344444445555443222
Q ss_pred hHhHHHHHHhcCCCCchhh
Q 014481 221 PSAATDLIARSIPLEERSR 239 (423)
Q Consensus 221 ~~~~~~~i~~~~~~~~r~~ 239 (423)
. .....+.+.+|+.-.|.
T Consensus 100 g-~~~~~l~~~iPp~v~G~ 117 (406)
T TIGR03173 100 A-PFFSKLVRFFPPVVTGT 117 (406)
T ss_pred H-HHHHHHHHHCCcHHHHH
Confidence 2 24556677777654443
No 323
>PF02990 EMP70: Endomembrane protein 70; InterPro: IPR004240 The transmembrane 9 superfamily protein (TM9SF) may function as a channel or small molecule transporter. Proteins in this group are endosomal integral membrane proteins.; GO: 0016021 integral to membrane
Probab=43.06 E-value=1.6e+02 Score=29.29 Aligned_cols=78 Identities=14% Similarity=0.182 Sum_probs=45.9
Q ss_pred HhhhcHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHhhC-CChhhHHHHHHHHHHHHHHHHHHHHHHhHHhhhcCCcccee
Q 014481 331 AIFRSKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELS-LNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMV 409 (423)
Q Consensus 331 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g-~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~r~~~~~~~ 409 (423)
++||.|.- ...+..+...+.+..+.......+.- .| +++..-|.+....-+..+++..++|+.+-|+-+.-......
T Consensus 253 DVFR~P~~-~~lls~lvG~G~Qll~~~~~~~~~a~-~g~~~~~~rg~l~t~~i~~y~~~~~iaGy~S~~~yk~~~g~~W~ 330 (521)
T PF02990_consen 253 DVFRPPKH-PMLLSALVGTGIQLLFMALVTLFFAA-LGFLSPNNRGSLLTAAIILYALTSFIAGYVSARLYKSFGGKKWK 330 (521)
T ss_pred HHhcCcCC-chHHHhHhcchhhhhHHHHHHHHHHH-hhhccccCcchHHHHHHHHHHHHhhHHHHHHHHHHHHcCCCcee
Confidence 56776652 22223333333333333333333332 34 55666677888888888889999999999987665544433
Q ss_pred e
Q 014481 410 R 410 (423)
Q Consensus 410 ~ 410 (423)
+
T Consensus 331 ~ 331 (521)
T PF02990_consen 331 K 331 (521)
T ss_pred e
Confidence 3
No 324
>KOG2765 consensus Predicted membrane protein [Function unknown]
Probab=41.67 E-value=1.5e+02 Score=27.76 Aligned_cols=15 Identities=27% Similarity=0.115 Sum_probs=10.5
Q ss_pred hhHhcCchHHHHHHH
Q 014481 173 AKIFGGRKVLQTGVL 187 (423)
Q Consensus 173 ~dr~G~r~~~~~~~~ 187 (423)
.||+.-.|++.+...
T Consensus 208 ~e~ft~sKllav~~s 222 (416)
T KOG2765|consen 208 VERFTLSKLLAVFVS 222 (416)
T ss_pred cchhhHHHHHHHHHh
Confidence 888888887655433
No 325
>TIGR00844 c_cpa1 na(+)/h(+) antiporter. This model is specific for the fungal members of this family.
Probab=41.45 E-value=4.5e+02 Score=27.70 Aligned_cols=32 Identities=9% Similarity=0.136 Sum_probs=17.6
Q ss_pred hhhHHHHHHhhHHHhhhccCchHHHHHHHHHH
Q 014481 248 LSFGSVAGLLLAPPIIENLGWESVFYIFGLLG 279 (423)
Q Consensus 248 ~~~g~~~g~~~~~~l~~~~gw~~~~~~~~~~~ 279 (423)
..++.++..+++.++....+|..++.+.++++
T Consensus 110 M~lT~livAL~a~~Li~GL~~~~ALLLGAILA 141 (810)
T TIGR00844 110 MTSGWLVIALFVWILVPGLNFPASLLMGACIT 141 (810)
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHHHHHHhhhc
Confidence 34444444444444444557777776666664
No 326
>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function.; GO: 0016020 membrane
Probab=40.52 E-value=63 Score=23.93 Aligned_cols=49 Identities=18% Similarity=0.225 Sum_probs=39.1
Q ss_pred cchhhHHHHHHHHHHHhhhhhhhhHhhHhcCchHHHHHHHHHHHHHHHH
Q 014481 148 SSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALL 196 (423)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~ 196 (423)
+...|-+..+|.-.+.+.++++++..|+..+-+.=.++..+..++..+.
T Consensus 53 p~~fGRvYAAYGGvfI~~Sl~W~w~vdg~~Pd~~D~iGa~i~L~G~~iI 101 (107)
T PF02694_consen 53 PAAFGRVYAAYGGVFIVASLLWGWLVDGVRPDRWDWIGAAICLVGVAII 101 (107)
T ss_pred cccchhHHHHhhhhHHHHHHHHHhhhcCcCCChHHHHhHHHHHHhHHhe
Confidence 3567888999999999999999999999988877777766655555443
No 327
>KOG1277 consensus Endosomal membrane proteins, EMP70 [Intracellular trafficking, secretion, and vesicular transport]
Probab=40.34 E-value=88 Score=29.92 Aligned_cols=31 Identities=29% Similarity=0.459 Sum_probs=20.2
Q ss_pred hhHHHHHHHHHHHhhhhhhhhHhh----HhcCchH
Q 014481 151 AGLVQSSFFWGYALSQLPGGWLAK----IFGGRKV 181 (423)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~g~l~d----r~G~r~~ 181 (423)
-|-+.+...+.+++.+++.|+.+. |.|-|+.
T Consensus 325 rGal~saaI~vYAlTs~i~GY~~gs~Y~r~gG~~W 359 (593)
T KOG1277|consen 325 RGALLSAAIVVYALTSPINGYVSGSFYARLGGRRW 359 (593)
T ss_pred chHHHHHHHHHHHhcccccccccceeeehhccHHH
Confidence 466777777777777777776644 5555443
No 328
>PF08566 Pam17: Mitochondrial import protein Pam17; InterPro: IPR013875 The presequence translocase-associated motor (PAM) drives the completion of preprotein translocation into the mitochondrial matrix. The Pam17 subunit is required for formation of a stable complex between cochaperones Pam16 and Pam18 and promotes the association of Pam16-Pam18 with the presequence translocase []. Mitochondria lacking Pam17 are selectively impaired in the import of matrix proteins [].
Probab=40.14 E-value=93 Score=25.42 Aligned_cols=10 Identities=10% Similarity=0.265 Sum_probs=5.3
Q ss_pred hhhhCCCcch
Q 014481 141 SHRFGWNSSV 150 (423)
Q Consensus 141 ~~~~~~s~~~ 150 (423)
..-+|+++-.
T Consensus 69 ~~I~GlDP~~ 78 (173)
T PF08566_consen 69 QQIMGLDPFM 78 (173)
T ss_pred ccccCcCHHH
Confidence 3345776643
No 329
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=40.10 E-value=1.1e+02 Score=31.36 Aligned_cols=54 Identities=13% Similarity=0.139 Sum_probs=36.9
Q ss_pred HHHHHHHhhcccchHhHHHHHHhcCCCCchhhHHHHHHhhhhhHHHHHHhhHHH
Q 014481 208 LSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPP 261 (423)
Q Consensus 208 ~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~ 261 (423)
.-.++.++|.........-...+-.|++-+....+++....++|.++...+..+
T Consensus 570 pq~~~~~~~e~~~~~~~~e~~~~~~p~~mks~~~a~~~~~~~~g~~~~~~~~~~ 623 (654)
T TIGR00926 570 PQYVILTAGEVLFSVTGLEFSYSQAPPNMKSVLQALWLLTVAIGNLIVVVIAEF 623 (654)
T ss_pred HHHHHHHHHHHHHHHHHHHhhHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 333445555544444444455566788889999999999999998888777654
No 330
>COG1268 BioY Uncharacterized conserved protein [General function prediction only]
Probab=40.06 E-value=1.2e+02 Score=25.22 Aligned_cols=23 Identities=17% Similarity=0.381 Sum_probs=19.6
Q ss_pred HHHHHHHHhhhhhhhhHhhHhcC
Q 014481 156 SSFFWGYALSQLPGGWLAKIFGG 178 (423)
Q Consensus 156 ~~~~~~~~~~~~~~g~l~dr~G~ 178 (423)
.-|.+++.+++.+.|++.||..+
T Consensus 89 gGyL~gfi~aa~l~G~l~~k~~~ 111 (184)
T COG1268 89 GGYLIGFIIAAFLIGLLAEKIRK 111 (184)
T ss_pred hhHHHHHHHHHHHHHHHHHhhhc
Confidence 45778888999999999999885
No 331
>COG3559 TnrB3 Putative exporter of polyketide antibiotics [Cell envelope biogenesis, outer membrane]
Probab=38.84 E-value=3.6e+02 Score=25.87 Aligned_cols=63 Identities=13% Similarity=0.109 Sum_probs=31.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhHHHHH----------hhCCChhhHHHHHHHHHHHHHHHHHHHHHHhHH
Q 014481 336 KAVWAMIYAHFCGSWGHYTCLSWLPTYFSE----------ELSLNLTEAAWVSILPPLASVLVTSIAAQFADN 398 (423)
Q Consensus 336 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~----------~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr 398 (423)
..++...+..++....+..+..-+-.++.+ ..+....+.+++...+.+.+++.+.+.-.+.-|
T Consensus 298 g~lI~W~v~~fllglvygs~fg~l~~fL~~n~avrqave~~e~ag~le~~Flv~lfsIisil~a~~~V~~vlk 370 (536)
T COG3559 298 GSLILWTVGLFLLGLVYGSVFGGLGDFLGDNTAVRQAVERMEGAGALEQAFLVLLFSIISILAAAFAVSLVLK 370 (536)
T ss_pred CccHHHHHHHHHHHHHHHHHhhhhhhhhcCcHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344444555555555555544444433322 123344455566666666666666555444444
No 332
>COG2233 UraA Xanthine/uracil permeases [Nucleotide transport and metabolism]
Probab=37.68 E-value=2e+02 Score=27.86 Aligned_cols=76 Identities=11% Similarity=0.006 Sum_probs=47.1
Q ss_pred HHHHHHHHHHhhhhhhhhhHHHhhhhhCCCcchhhHHHHHHHHHHHhhhhhhhhHhhHhcCchHHHHHHHHHHHHHHH
Q 014481 118 TTSLAFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATAL 195 (423)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~ 195 (423)
.+.+-.++..++..+..|.+ +...+|++.++...+.+.-.+...++.++--....+.|-|-....+.....++-++
T Consensus 20 ~lglQH~lamfg~~V~VPli--vg~a~~l~~~~~~~Lis~~l~~~GiaTllq~~~~~~~g~~lP~~lG~sFafi~p~i 95 (451)
T COG2233 20 LLGLQHLLAMFGATVLVPLL--VGLALGLSAEDTAYLISADLLASGIGTLLQLLGTGPGGSGLPSYLGSSFAFVAPMI 95 (451)
T ss_pred HHHHHHHHHHHhcchHhhHH--hccCCCCCHHHHHHHHHHHHHHHHHHHHHHHhhccCcccCCCeeEechHHHHHHHH
Confidence 34444444444433333222 45688999999999999999999998887665444455565555554444444433
No 333
>COG2274 SunT ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain [Defense mechanisms]
Probab=37.31 E-value=5e+02 Score=27.05 Aligned_cols=29 Identities=3% Similarity=0.202 Sum_probs=15.7
Q ss_pred hhhccCchHHHHHHHHHHHHHHHHHHhhc
Q 014481 262 IIENLGWESVFYIFGLLGIAWFSGFKILQ 290 (423)
Q Consensus 262 l~~~~gw~~~~~~~~~~~~~~~~~~~~~~ 290 (423)
++-.++|..++...+.+.+..++..++.|
T Consensus 287 vm~~ys~~L~li~l~~~~l~~l~~~~~~~ 315 (709)
T COG2274 287 VMFLYSWKLTLIVLAAIPLNVLITLIFQP 315 (709)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33345777666666555554444444443
No 334
>TIGR02230 ATPase_gene1 F0F1-ATPase subunit, putative. This model represents a protein found encoded in F1F0-ATPase operons in several genomes, including Methanosarcina barkeri (archaeal) and Chlorobium tepidum (bacterial). It is a small protein (about 100 amino acids) with long hydrophic stretches and is presumed to be a subunit of the enzyme.
Probab=36.93 E-value=1.7e+02 Score=21.57 Aligned_cols=29 Identities=14% Similarity=0.067 Sum_probs=15.1
Q ss_pred hhhhhhhhHhhH-hcCchHHHHHHHHHHHH
Q 014481 164 LSQLPGGWLAKI-FGGRKVLQTGVLIWSLA 192 (423)
Q Consensus 164 ~~~~~~g~l~dr-~G~r~~~~~~~~~~~~~ 192 (423)
+...+.|.+.|+ ++-++.+.+.+++.+++
T Consensus 57 l~G~~lG~WLD~~~~t~~~~tl~~lllGv~ 86 (100)
T TIGR02230 57 LLGVAVGIWLDRHYPSPFSWTLTMLIVGVV 86 (100)
T ss_pred HHHHHHHHHHHhhcCCCcHHHHHHHHHHHH
Confidence 344455666665 56555555544444443
No 335
>PF12273 RCR: Chitin synthesis regulation, resistance to Congo red; InterPro: IPR020999 RCR proteins are ER membrane proteins that regulate chitin deposition in fungal cell walls. Although chitin, a linear polymer of beta-1,4-linked N-acetylglucosamine, constitutes only 2% of the cell wall it plays a vital role in the overall protection of the cell wall against stress, noxious chemicals and osmotic pressure changes. Congo red is a cell wall-disrupting benzidine-type dye extensively used in many cell wall mutant studies that specifically targets chitin in yeast cells and inhibits growth. RCR proteins render the yeasts resistant to Congo red by diminishing the content of chitin in the cell wall []. RCR proteins are probably regulating chitin synthase III interact directly with ubiquitin ligase Rsp5, and the VPEY motif is necessary for this, via interaction with the WW domains of Rsp5 [].
Probab=36.67 E-value=17 Score=28.23 Aligned_cols=16 Identities=19% Similarity=0.322 Sum_probs=8.1
Q ss_pred hHHHHHHHHHHHHHHH
Q 014481 269 ESVFYIFGLLGIAWFS 284 (423)
Q Consensus 269 ~~~~~~~~~~~~~~~~ 284 (423)
||++++..++.+++++
T Consensus 1 RW~l~~iii~~i~l~~ 16 (130)
T PF12273_consen 1 RWVLFAIIIVAILLFL 16 (130)
T ss_pred CeeeHHHHHHHHHHHH
Confidence 4566655555444433
No 336
>PF13073 DUF3937: Protein of unknown function (DUF3937)
Probab=36.16 E-value=78 Score=20.75 Aligned_cols=38 Identities=13% Similarity=0.140 Sum_probs=25.2
Q ss_pred hhcHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHhhCCC
Q 014481 333 FRSKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLN 370 (423)
Q Consensus 333 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~s 370 (423)
|+|+++..+.+..+.+.........++..|+...-|..
T Consensus 2 f~nkklir~gltlfv~L~vi~FtigYfq~Yl~saagi~ 39 (73)
T PF13073_consen 2 FTNKKLIRFGLTLFVFLSVIDFTIGYFQTYLESAAGIK 39 (73)
T ss_pred CccchhhhhhhHHHHHHHHHHhhHHHHHHHHHhccCCe
Confidence 56777777777666666555555667777777655543
No 337
>COG3619 Predicted membrane protein [Function unknown]
Probab=36.09 E-value=2.9e+02 Score=23.92 Aligned_cols=60 Identities=10% Similarity=0.140 Sum_probs=30.7
Q ss_pred HHhcCCCCc-hhhHHHHHHhhhhhHHHHHHhhHHHhhhccCchHHHHHHHHHHHHHHHHHHh
Q 014481 228 IARSIPLEE-RSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAWFSGFKI 288 (423)
Q Consensus 228 i~~~~~~~~-r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~~~~~~~~~~~~~~~~~~ 288 (423)
+.+++..++ .-.--.+.+....++.++|.++++.+...+| ...+|+.+++.+...+....
T Consensus 156 l~~~l~~k~~~~~~~~~~~~~~il~f~~GAi~g~ll~~~~g-~~al~~~~~~i~~~~~~~~~ 216 (226)
T COG3619 156 LGRYLSGKDKEKLRDWLIYLSLILSFIVGAICGALLTLFFG-LKALWVVAALILAVYLLALF 216 (226)
T ss_pred HHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-hhHHHHHHHHHHHHHHHHHH
Confidence 344444332 2233344555666677777777777766554 23455554444443333333
No 338
>PRK02237 hypothetical protein; Provisional
Probab=36.02 E-value=1e+02 Score=22.99 Aligned_cols=48 Identities=17% Similarity=0.124 Sum_probs=38.1
Q ss_pred chhhHHHHHHHHHHHhhhhhhhhHhhHhcCchHHHHHHHHHHHHHHHH
Q 014481 149 SVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALL 196 (423)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~ 196 (423)
+..|-+...|.-.+++.++++++..|+.-+-+.=.+|..+..++..+.
T Consensus 56 ~~~GRvYAAYGGvyI~~Sl~W~w~vdg~~Pd~~D~iGa~v~L~G~~iI 103 (109)
T PRK02237 56 AAFGRVYAAYGGVYVAGSLLWLWVVDGVRPDRWDWIGAAICLVGMAVI 103 (109)
T ss_pred hhhhhHHHHhhhHHHHHHHHHHHHhcCcCCChhHHHhHHHHHHhHHHh
Confidence 447888999999999999999999999988777777766655555443
No 339
>KOG2881 consensus Predicted membrane protein [Function unknown]
Probab=35.71 E-value=3.1e+02 Score=24.23 Aligned_cols=20 Identities=25% Similarity=0.448 Sum_probs=10.3
Q ss_pred hhcHHHHHHHHHHHHHHHHH
Q 014481 333 FRSKAVWAMIYAHFCGSWGH 352 (423)
Q Consensus 333 ~~~~~~~~~~l~~~~~~~~~ 352 (423)
+..|.++......|+.-++.
T Consensus 204 ffspifikaFsltF~aEwGD 223 (294)
T KOG2881|consen 204 FFSPIFIKAFSLTFLAEWGD 223 (294)
T ss_pred hccHHHHHHHHHHHHHHhcc
Confidence 33456665555555554443
No 340
>PF02632 BioY: BioY family; InterPro: IPR003784 BioMNY proteins are considered to constitute tripartite biotin transporters in prokaryotes. One-third of the widespread bioY genes are linked to bioMN. Many bioY genes are located at loci encoding biotin biosynthesis, while others are unlinked to biotin metabolic or transport genes. BioY is a high-capacity transporter that is converted to a high-affinity system in the presence of BioMN. BioMNY-mediated biotin uptake is severely impaired by the replacement of the Walker A lysine residue in BioM, demonstrating the dependency of high-affinity transport on a functional ATPase [].
Probab=35.56 E-value=1.5e+02 Score=23.63 Aligned_cols=25 Identities=24% Similarity=0.461 Sum_probs=21.0
Q ss_pred HHHHHHHHhhhhhhhhHhhHhcCch
Q 014481 156 SSFFWGYALSQLPGGWLAKIFGGRK 180 (423)
Q Consensus 156 ~~~~~~~~~~~~~~g~l~dr~G~r~ 180 (423)
.-|.+++.+.+.+.|++.+|..+++
T Consensus 60 gGyl~gf~~~a~i~g~~~~~~~~~~ 84 (148)
T PF02632_consen 60 GGYLLGFPLAALIIGLLAERLKRSR 84 (148)
T ss_pred ChHHHHHHHHHHHHHHHHHhccccc
Confidence 3578888899999999999988764
No 341
>TIGR03802 Asp_Ala_antiprt aspartate-alanine antiporter. All members of the seed alignment for this model are asparate-alanine anti-transporters (AspT) encoded next to the gene for aspartate 4-decarboxylase (AspD), which converts asparate to alanine, releasing CO2. The exchange of Asp for Ala is electrogenic, so the AspD/AspT system confers a proton-motive force. This transporter contains two copies of the AspT/YidE/YbjL antiporter duplication domain (TIGR01625).
Probab=34.76 E-value=3.7e+02 Score=27.10 Aligned_cols=83 Identities=11% Similarity=0.067 Sum_probs=43.3
Q ss_pred hhhHHHHHHHHHHHhhhhhhhhHhhHhcCchHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhhcccchHhHHHHHH
Q 014481 150 VAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIA 229 (423)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~i~ 229 (423)
+.|+...++.+|...|+-+..-+.+ .|-+. ++++.++..+..++.......+.-+=....+-.++.+...++..+++.
T Consensus 451 ~~GL~lFla~vG~~aG~~f~~~l~~-~G~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~aG~~t~t~~l~~a~ 528 (562)
T TIGR03802 451 DLGLALFIAVVGLSAGPQAVTAIKE-MGLTL-FLLGIVVTILPLIITMLIGKYVLKYDPALLLGALAGARTATPALGAVL 528 (562)
T ss_pred HHhHHHHHHHHHHhhhHHHHHHHHH-hhHHH-HHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHhhccCCCcHHHHHHH
Confidence 4677777888888888877776643 55443 334444444443333222221111111222222444555666677777
Q ss_pred hcCCC
Q 014481 230 RSIPL 234 (423)
Q Consensus 230 ~~~~~ 234 (423)
|..+.
T Consensus 529 ~~~~~ 533 (562)
T TIGR03802 529 ERAGS 533 (562)
T ss_pred HhcCC
Confidence 76653
No 342
>PF03596 Cad: Cadmium resistance transporter; InterPro: IPR004676 These proteins are members of the Cadmium Resistance (CadD) Family. To date, this family of proteins has only been found in Gram-positive bacteria. The CadD family includes two close orthologues in two Staphylococcus species that have been reported to function in cadmium resistance, and another staphylococcal protein that has been reported to possibly function in quaternary ammonium ion export.
Probab=34.68 E-value=2.8e+02 Score=23.30 Aligned_cols=9 Identities=22% Similarity=0.445 Sum_probs=5.3
Q ss_pred HhhhhHHHH
Q 014481 356 LSWLPTYFS 364 (423)
Q Consensus 356 ~~~~~~~~~ 364 (423)
..|.|.+..
T Consensus 114 gIYiP~Fa~ 122 (191)
T PF03596_consen 114 GIYIPLFAS 122 (191)
T ss_pred EEeehhhhc
Confidence 456666654
No 343
>PF11833 DUF3353: Protein of unknown function (DUF3353); InterPro: IPR021788 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 205 to 258 amino acids in length.
Probab=34.34 E-value=2.8e+02 Score=23.31 Aligned_cols=31 Identities=32% Similarity=0.420 Sum_probs=23.7
Q ss_pred CCchhhHHHHHHhhhhhHHHHHHhhHHHhhh
Q 014481 234 LEERSRAVSFVFGGLSFGSVAGLLLAPPIIE 264 (423)
Q Consensus 234 ~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~ 264 (423)
.++.+++.++...+..+|.++|..+..++..
T Consensus 136 ~~~~~rA~~~~~~~L~~G~~lGs~l~~~l~~ 166 (194)
T PF11833_consen 136 ERKLGRAFLWTLGGLVVGLILGSLLASWLPV 166 (194)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHhhccc
Confidence 3566788888888888888888888877654
No 344
>PF13940 Ldr_toxin: Toxin Ldr, type I toxin-antitoxin system
Probab=33.33 E-value=75 Score=17.82 Aligned_cols=20 Identities=15% Similarity=0.331 Sum_probs=13.1
Q ss_pred HHHHHHHHHHHHHHHHHhHH
Q 014481 379 ILPPLASVLVTSIAAQFADN 398 (423)
Q Consensus 379 ~~~~~~~~~~~~~~g~l~dr 398 (423)
+...+++++.+++.+|+-+|
T Consensus 15 AAP~iagIi~s~iv~w~~~R 34 (35)
T PF13940_consen 15 AAPIIAGIIASLIVGWLRNR 34 (35)
T ss_pred HhHHHHHHHHHHHHHHHHhc
Confidence 44556677777777777554
No 345
>PRK10263 DNA translocase FtsK; Provisional
Probab=32.02 E-value=5.4e+02 Score=28.86 Aligned_cols=21 Identities=24% Similarity=0.374 Sum_probs=12.5
Q ss_pred hhhHHHHHHhhHHHhhhccCc
Q 014481 248 LSFGSVAGLLLAPPIIENLGW 268 (423)
Q Consensus 248 ~~~g~~~g~~~~~~l~~~~gw 268 (423)
.+.++.+|..++..+...+|+
T Consensus 61 ~Nl~GiVGA~LAD~L~~LFGl 81 (1355)
T PRK10263 61 HNLGGMPGAWLADTLFFIFGV 81 (1355)
T ss_pred ccccchHHHHHHHHHHHHHhH
Confidence 455666666666666655564
No 346
>COG2119 Predicted membrane protein [Function unknown]
Probab=30.88 E-value=3.1e+02 Score=22.79 Aligned_cols=77 Identities=16% Similarity=0.183 Sum_probs=42.2
Q ss_pred HHHHHHHHHHHHH-hhhhhhhhhHHHhhhhhCCCcchhhHHHHHHHHHHHhhhhhhhhHhhHhcCchHHHHHHHHHHHHH
Q 014481 115 LIGTTSLAFVICN-MDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLAT 193 (423)
Q Consensus 115 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~ 193 (423)
.+...++..|+.- .+.+-+... .+..+++......--......++..++-..+.++++|+..|.+-.++.+++.+..
T Consensus 101 ~f~~tfi~~FlaE~GDKTQiATI--aLaA~~~~~~~V~~Gt~lg~~l~s~laVl~G~~ia~ki~~r~l~~~aallFl~fa 178 (190)
T COG2119 101 VFVTTFITFFLAELGDKTQIATI--ALAADYHSPWAVFAGTTLGMILASVLAVLLGKLIAGKLPERLLRFIAALLFLIFA 178 (190)
T ss_pred HHHHHHHHHHHHHhccHHHHHHH--HHhhcCCCceeeehhhHHHHHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHH
Confidence 4444444444444 444443322 2344555422221112223455666777788889999999988887766654443
No 347
>PRK13629 threonine/serine transporter TdcC; Provisional
Probab=30.77 E-value=5.1e+02 Score=25.15 Aligned_cols=42 Identities=10% Similarity=-0.011 Sum_probs=28.6
Q ss_pred CCCchhhHHHHHHhhhhhHHHHHHhhHHHhhhccCchHHHHHHHHHH
Q 014481 233 PLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLG 279 (423)
Q Consensus 233 ~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~~~~~~~~~ 279 (423)
.+.+.+...+++.++.+.|.+.-|+..|. +|-|+..+..+++
T Consensus 18 ~~~d~~W~l~l~GTAIGAGmLfLPI~~g~-----~Gf~p~lillll~ 59 (443)
T PRK13629 18 RKSDTTWTLGLFGTAIGAGVLFFPIRAGF-----GGLIPILLMLVLA 59 (443)
T ss_pred ccccchHHHHHHHHHHhHHHHHHHHHHhc-----chHHHHHHHHHHH
Confidence 44567788889999999998888887664 3444444444443
No 348
>COG1457 CodB Purine-cytosine permease and related proteins [Nucleotide transport and metabolism]
Probab=30.70 E-value=5.1e+02 Score=25.13 Aligned_cols=65 Identities=11% Similarity=-0.132 Sum_probs=34.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhHHHHHhhCCChhhHHHHHHHHHHHHHHHHHHHHHHhHHhhhc
Q 014481 336 KAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIAT 402 (423)
Q Consensus 336 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~r 402 (423)
+.-+...+.......+.++.+.++.-.... .. +.........+.++...+..+++-+...++.|-
T Consensus 94 ~Gs~l~sll~~~~~iGW~~v~~~l~~~a~~-~~-~~~~~~~~ili~g~l~~l~~ifG~r~l~~l~~~ 158 (442)
T COG1457 94 KGSILPSLLNGITLIGWFGVNVILSGIAIG-SG-TGLPVWAGILIIGVLMTLVTIFGYRALHKLERI 158 (442)
T ss_pred hhHHHHHHHHHHHHhhHHHHHHHHhccccc-cC-CCCcHHHHHHHHHHHHHHHHHHhHHHHHHHHHH
Confidence 333444455555555666665555444311 11 233344455556666666777777777776643
No 349
>COG4769 Predicted membrane protein [Function unknown]
Probab=30.37 E-value=93 Score=25.15 Aligned_cols=53 Identities=13% Similarity=0.134 Sum_probs=35.5
Q ss_pred HHHHHHHhhhhhhhhHhhHhcCchHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhh
Q 014481 157 SFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPLLAGFMPGLVLSRVLVGIG 216 (423)
Q Consensus 157 ~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~ 216 (423)
++.+...+.+...-++..++|+|..-.++... ++.+.+|..++++.+++.+-.
T Consensus 81 l~sfaG~i~S~L~m~~l~~f~~k~~S~lgiS~-------mGaF~hNl~QLivas~Lv~~~ 133 (181)
T COG4769 81 LYSFAGAILSTLFMYFLYQFGPKYLSLLGISV-------MGAFTHNLGQLIVASFLVFTT 133 (181)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCceEeeeehhh-------HHHHHHhHHHHHHHHHHHhcc
Confidence 34555566667778888999988765444322 235667778888888877643
No 350
>PRK03818 putative transporter; Validated
Probab=29.54 E-value=4.8e+02 Score=26.19 Aligned_cols=81 Identities=14% Similarity=0.031 Sum_probs=40.1
Q ss_pred hhhHHHHHHHHHHHhhhhhhhhHhhHhcCchHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhhcccchHhHHHHHH
Q 014481 150 VAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIA 229 (423)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~i~ 229 (423)
+.|+...++.+|...|.-+..-+.+..|.+.. .++.++..+..++...+...+.-+=..+.+-.++.+...++..+++.
T Consensus 436 ~~GL~lFla~vGl~aG~~f~~~~~~~~G~~~~-~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~G~~aG~~t~tp~l~~a~ 514 (552)
T PRK03818 436 ELGIVLFLAVVGLKSGGDFVDTLVNGEGLSWI-GYGFLITAVPLLIVGILARMLAKMNYLTLCGMLAGSMTDPPALAFAN 514 (552)
T ss_pred HHhHHHHHHHHHhhhhHHHHHHHhccchHHHH-HHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHhccCCCcHHHHHHh
Confidence 35666666667766666666655554554433 34444444433333222222111112233333444555666677777
Q ss_pred hc
Q 014481 230 RS 231 (423)
Q Consensus 230 ~~ 231 (423)
+.
T Consensus 515 ~~ 516 (552)
T PRK03818 515 NL 516 (552)
T ss_pred cc
Confidence 74
No 351
>KOG2601 consensus Iron transporter [Inorganic ion transport and metabolism]
Probab=28.95 E-value=75 Score=29.89 Aligned_cols=70 Identities=14% Similarity=0.148 Sum_probs=46.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhHHHHHhhCCChhhHHHHHHHHHHHHHHHHHHHHHHhHHhhhcCCc
Q 014481 336 KAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVE 405 (423)
Q Consensus 336 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~r~~~ 405 (423)
+....+.+++++..++.-....-...|+....|-|-..++....+-+...++-..+.|-..|+..|.|..
T Consensus 27 ~~~i~Ly~gy~lt~wgdR~W~F~VsL~M~~L~gnsl~lvAvyglvesgs~lvlg~ivGq~vDg~sr~Kvi 96 (503)
T KOG2601|consen 27 STVIFLYLGYFLTTWGDRMWEFSVSLFMILLGGNSLLLVAVYGLVESGSQLVLGPIVGQWVDGMSRVKVI 96 (503)
T ss_pred ceeehhhHHHHHhHhhHhHHHHHHHHHHHHHcCceehhHHHHHHHHHhHHHhhHHHHHHHhcchhHHHHH
Confidence 3344455666777777666677777787766565555555555666666666667778888998887653
No 352
>TIGR02230 ATPase_gene1 F0F1-ATPase subunit, putative. This model represents a protein found encoded in F1F0-ATPase operons in several genomes, including Methanosarcina barkeri (archaeal) and Chlorobium tepidum (bacterial). It is a small protein (about 100 amino acids) with long hydrophic stretches and is presumed to be a subunit of the enzyme.
Probab=28.79 E-value=2.4e+02 Score=20.78 Aligned_cols=23 Identities=4% Similarity=-0.048 Sum_probs=10.9
Q ss_pred HhhhhhHHHHHHhhHHHhhhccC
Q 014481 245 FGGLSFGSVAGLLLAPPIIENLG 267 (423)
Q Consensus 245 ~~~~~~g~~~g~~~~~~l~~~~g 267 (423)
.....+..++|..+|-+|=..++
T Consensus 49 G~~~v~pil~G~~lG~WLD~~~~ 71 (100)
T TIGR02230 49 GWSVAIPTLLGVAVGIWLDRHYP 71 (100)
T ss_pred HHHHHHHHHHHHHHHHHHHhhcC
Confidence 33334444455555555544454
No 353
>KOG3814 consensus Signaling protein van gogh/strabismus [Signal transduction mechanisms]
Probab=28.69 E-value=5e+02 Score=24.39 Aligned_cols=13 Identities=15% Similarity=-0.138 Sum_probs=9.9
Q ss_pred hHHHHHHHHHHHH
Q 014481 201 GFMPGLVLSRVLV 213 (423)
Q Consensus 201 ~~~~~~~~~~~l~ 213 (423)
-.+|.+++.|++.
T Consensus 203 fayWLFYiVri~~ 215 (531)
T KOG3814|consen 203 FAYWLFYIVRILD 215 (531)
T ss_pred HHHHHHHhhhhhc
Confidence 3568888888876
No 354
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=27.77 E-value=1.7e+02 Score=21.75 Aligned_cols=47 Identities=15% Similarity=0.120 Sum_probs=25.5
Q ss_pred CchhhHHHHHHhhhhhHHHHHHhhHHHhhhcc-C-chHHHHHHHHHHHH
Q 014481 235 EERSRAVSFVFGGLSFGSVAGLLLAPPIIENL-G-WESVFYIFGLLGIA 281 (423)
Q Consensus 235 ~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~-g-w~~~~~~~~~~~~~ 281 (423)
+.++.+.++--..-.+++++-....|++.+++ | =.|-+++..++.++
T Consensus 38 s~k~~~~a~klssefIsGilVGa~iG~llD~~agTsPwglIv~lllGf~ 86 (116)
T COG5336 38 SIKGYAQAFKLSSEFISGILVGAGIGWLLDKFAGTSPWGLIVFLLLGFG 86 (116)
T ss_pred hhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHH
Confidence 45666677655555555555555666777764 2 23444444444333
No 355
>PF04226 Transgly_assoc: Transglycosylase associated protein; InterPro: IPR007341 This bacterial protein is predicted to be an integral membrane protein. Some family members have been annotated as transglycosylase-associated proteins, but no experimental evidence is provided. This family was annotated based on the information in P76011 from SWISSPROT.; GO: 0016021 integral to membrane
Probab=27.58 E-value=1.6e+02 Score=18.24 Aligned_cols=32 Identities=22% Similarity=0.138 Sum_probs=13.8
Q ss_pred HHHHHHhhHHHhhhccCchHHHHHHHHHHHHH
Q 014481 251 GSVAGLLLAPPIIENLGWESVFYIFGLLGIAW 282 (423)
Q Consensus 251 g~~~g~~~~~~l~~~~gw~~~~~~~~~~~~~~ 282 (423)
|+.+|..+.+.+....++.+.-++.+++..+.
T Consensus 7 Ga~vGg~l~~~lg~~~~~~~~~~i~aviGAii 38 (48)
T PF04226_consen 7 GAFVGGWLFGLLGINGGGSWGSFIVAVIGAII 38 (48)
T ss_pred HHHHHHHHHHHhcccCCchHHHHHHHHHHHHH
Confidence 44444444333332223455555555554443
No 356
>KOG1397 consensus Ca2+/H+ antiporter VCX1 and related proteins [Inorganic ion transport and metabolism]
Probab=27.34 E-value=1.6e+02 Score=27.71 Aligned_cols=43 Identities=19% Similarity=0.208 Sum_probs=24.8
Q ss_pred hHHHHHHHHHHHHHHHhhhhhhhhhHHHhhhhhCCCcchhhHH
Q 014481 112 RYKLIGTTSLAFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLV 154 (423)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~ 154 (423)
+|..+..+....+...+..-.....+....++++++.+-+|++
T Consensus 288 ~~ss~~~L~~~T~~vsllaeyLV~~Id~~~ds~~ls~~Figli 330 (441)
T KOG1397|consen 288 RWSSIIWLLIMTLLVSLLAEYLVDTIDDVSDSWGLSVKFIGLI 330 (441)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhhheee
Confidence 3444444444444444444444445556778888888776654
No 357
>PF11368 DUF3169: Protein of unknown function (DUF3169); InterPro: IPR021509 Some members in this family of proteins are annotated as membrane proteins however this cannot be confirmed. Currently there is no known function.
Probab=27.33 E-value=4.2e+02 Score=23.17 Aligned_cols=25 Identities=16% Similarity=0.215 Sum_probs=14.3
Q ss_pred hhHHHHHHhhhhhHHHHHHhhHHHh
Q 014481 238 SRAVSFVFGGLSFGSVAGLLLAPPI 262 (423)
Q Consensus 238 ~~~~~~~~~~~~~g~~~g~~~~~~l 262 (423)
.+.....-.+..+|+++|...+..-
T Consensus 9 ~~~~~~illg~~iGg~~G~~~~~~~ 33 (248)
T PF11368_consen 9 LRFLLLILLGGLIGGFIGFFIGRIG 33 (248)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3455555566666666666555444
No 358
>PF13440 Polysacc_synt_3: Polysaccharide biosynthesis protein
Probab=26.93 E-value=4e+02 Score=22.70 Aligned_cols=32 Identities=22% Similarity=0.158 Sum_probs=19.4
Q ss_pred HhhhhHHHHHhhCCChhhHHHHHHHHHHHHHHH
Q 014481 356 LSWLPTYFSEELSLNLTEAAWVSILPPLASVLV 388 (423)
Q Consensus 356 ~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~ 388 (423)
....+.++...+ +++.+.|.......+...+.
T Consensus 202 ~~~~~~~li~~~-l~~~~~g~y~~a~~l~~~~~ 233 (251)
T PF13440_consen 202 LSQIDRLLIGYF-LGPEAVGIYSVAQRLASLPA 233 (251)
T ss_pred HHHHHHHHHHHH-cCHHHHHHHHHHHHHHHHHH
Confidence 345566665542 37788887777666665444
No 359
>KOG4830 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=26.77 E-value=81 Score=27.99 Aligned_cols=117 Identities=12% Similarity=0.112 Sum_probs=60.8
Q ss_pred HHHHHHHHHhhhhhhhhhHHH-hhhhhCCCcchhhHHHHHHHHHHHhhhhhhhhH-hhHhcCchHHHHHHHHHHHHHHHH
Q 014481 119 TSLAFVICNMDKVNLSVAIIP-MSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWL-AKIFGGRKVLQTGVLIWSLATALL 196 (423)
Q Consensus 119 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l-~dr~G~r~~~~~~~~~~~~~~~~~ 196 (423)
+.+.+++.-...++-..+++. +..+++++.+...++-.+..+.....+.+-.-+ -++...|.....|.+++..+....
T Consensus 206 iAllYmLsRL~iNiSQaYlaFfviddlqm~qsakAllP~v~Yl~SF~VS~v~~eipwngkrlKayYsaGgiiwifcga~i 285 (412)
T KOG4830|consen 206 IALLYMLSRLYINISQAYLAFFVIDDLQMEQSAKALLPMVAYLSSFSVSMVNSEIPWNGKRLKAYYSAGGIIWIFCGAVI 285 (412)
T ss_pred HHHHHHHHHHHhhhhhhheeeEEeehhhHHHHHhhhhHHHHHHhhhhHHhhcccCCcCcceeeeeeecccHHHHHhhhhe
Confidence 344444444444444444554 456677776666666655555544433322211 112222333444544444443333
Q ss_pred HHhhhHHH-HHHHHHHHHHhhcccchHhHHHHHHhcCCCC
Q 014481 197 PLLAGFMP-GLVLSRVLVGIGEGVSPSAATDLIARSIPLE 235 (423)
Q Consensus 197 ~~~~~~~~-~~~~~~~l~G~~~~~~~~~~~~~i~~~~~~~ 235 (423)
......+- .+++..++.|++.+.......++.++....+
T Consensus 286 lLlpr~i~symyAisvfIGIAnAimlvtslsitavli~~~ 325 (412)
T KOG4830|consen 286 LLLPRGIKSYMYAISVFIGIANAIMLVTSLSITAVLINKN 325 (412)
T ss_pred eecccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 23344332 3456667889998888777777777776543
No 360
>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function. The region concerned is approximately 280 residues long.
Probab=26.76 E-value=4.1e+02 Score=23.51 Aligned_cols=12 Identities=25% Similarity=0.102 Sum_probs=5.2
Q ss_pred CCCcchhhHHHH
Q 014481 145 GWNSSVAGLVQS 156 (423)
Q Consensus 145 ~~s~~~~~~~~~ 156 (423)
+.+......+++
T Consensus 214 ~as~~~ldYvFs 225 (254)
T PF07857_consen 214 GASQNGLDYVFS 225 (254)
T ss_pred CCCCcchheeHH
Confidence 344444444443
No 361
>PF03741 TerC: Integral membrane protein TerC family; InterPro: IPR005496 A family containining a number of integral membrane proteins is named after TerC protein. TerC has been implicated in resistance to tellurium, and may be involved in efflux of tellurium ions. The tellurite-resistant Escherichia coli strain KL53 was found during testing of a group of clinical isolates for antibiotic and heavy metal ion resistance []. The determinant of the strain's tellurite resistance was located on a large conjugative plasmid, and analyses showed the genes terB, terC, terD and terE were essential for conservation of this resistance. Members of this family contain a number of conserved aspartates which may be involved in metal ion binding.; GO: 0016021 integral to membrane
Probab=26.45 E-value=3.8e+02 Score=22.28 Aligned_cols=55 Identities=22% Similarity=0.294 Sum_probs=27.0
Q ss_pred HhHHHHHHhcCCCCchhhHHHHHHhhhhhHHHHHHhhHHHhhhccCchHHHHHHHHH
Q 014481 222 SAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLL 278 (423)
Q Consensus 222 ~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~~~~~~~~ 278 (423)
....+++.+..|+++|.++.-+--.+..+--.+.-.++.++.+. |+|...+.|+.
T Consensus 15 ~~vi~~~~~~lp~~~r~kal~~Gi~~A~~lR~~~i~~~~~ll~~--~~~i~~igG~~ 69 (183)
T PF03741_consen 15 AFVIAMIFRKLPPEQRRKALFWGIIGAIVLRIIFIFLASWLLSI--FPWILLIGGLF 69 (183)
T ss_pred HHHHHHHHhCCCHHHhhhhHHHhHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHH
Confidence 34456666678876655544332222223333444455566654 34544444443
No 362
>PF06826 Asp-Al_Ex: Predicted Permease Membrane Region; InterPro: IPR006512 These sequences contain a domain that is duplicated in HI0035 of Haemophilus influenzae, in YidE and YbjL of Escherichia coli, and in a number of other putative transporters. Member proteins may have 0, 1, or 2 copies of the TrkA-C potassium uptake domain (IPR006037 from INTERPRO) between the duplications. The duplication appears distantly related to both the N- and the C-terminal domains the sodium/hydrogen exchanger family domain (IPR006153 from INTERPRO). The domain contains several apparent transmembrane regions and is proposed here to act in transport.
Probab=26.23 E-value=3.7e+02 Score=22.04 Aligned_cols=81 Identities=16% Similarity=0.138 Sum_probs=44.3
Q ss_pred hhhHHHHHHHHHHHhhhhhhhhHhhHhcCchHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHH-hhcccchHhHHHHH
Q 014481 150 VAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPLLAGFMPGLVLSRVLVG-IGEGVSPSAATDLI 228 (423)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G-~~~~~~~~~~~~~i 228 (423)
+.|+..-++.+|...+.-+..-+.+. |-| .+.++.++..+..++.......+.-+=.. ...| +..+...++..+..
T Consensus 57 ~~GL~lFl~~VGl~aG~~F~~~l~~~-G~~-~~~~~~~i~~~~~~~~~~~~~~~~~l~~~-~~~G~~aGa~T~tp~L~~A 133 (169)
T PF06826_consen 57 QLGLALFLAAVGLSAGPGFFSSLKRG-GLK-LLLLGVIITLVPLLIALVIGRYLFKLNPG-IAAGILAGALTSTPALAAA 133 (169)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH-hHH-HHHHHHHHHHHHHHHHHHHHHHHcCCCHH-HHHHHHHccccCcHHHHHH
Confidence 46778888888888888887777665 544 44455555445444432222211111111 2233 33344556677777
Q ss_pred HhcCC
Q 014481 229 ARSIP 233 (423)
Q Consensus 229 ~~~~~ 233 (423)
.|...
T Consensus 134 ~~~~~ 138 (169)
T PF06826_consen 134 QEAIS 138 (169)
T ss_pred HHhhh
Confidence 77733
No 363
>PF11947 DUF3464: Protein of unknown function (DUF3464); InterPro: IPR021855 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 137 to 196 amino acids in length.
Probab=25.88 E-value=3.5e+02 Score=21.74 Aligned_cols=35 Identities=23% Similarity=0.250 Sum_probs=26.4
Q ss_pred hCCCcchhhHHHHHHHHHHHhhhhhhhhHhhHhcCc
Q 014481 144 FGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGR 179 (423)
Q Consensus 144 ~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r 179 (423)
+.+. ..+.++.+...++..+..+-.|.|+-.+...
T Consensus 92 ~dvP-~~~~~~~S~~~Fg~gllGisYGilSaSWD~~ 126 (153)
T PF11947_consen 92 VDVP-PWAVLLVSLVFFGLGLLGISYGILSASWDPE 126 (153)
T ss_pred cccC-chHHHHHHHHHHHHHHHhhhhhhcccccCCC
Confidence 4443 4467777888888888888999999888765
No 364
>TIGR03644 marine_trans_1 probable ammonium transporter, marine subtype. Members of this protein family are well conserved subclass of putative ammonimum transporters, belonging to the much broader set of ammonium/methylammonium transporter described by TIGR00836. Species with this transporter tend to be marine bacteria. Partial phylogenetic profiling (PPP) picks a member of this protein family as the single best-scoring protein vs. a reference profile for the marine environment Genome Property for a large number of different query genomes. This finding by PPP suggests that this transporter family represents an important adaptation to the marine environment.
Probab=25.67 E-value=6e+02 Score=24.33 Aligned_cols=47 Identities=17% Similarity=0.175 Sum_probs=24.6
Q ss_pred HHHhhcccchHhHHHHHHhcCCCCchhhHHHHHHhhhhhHHHHHHhhH
Q 014481 212 LVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLA 259 (423)
Q Consensus 212 l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~ 259 (423)
+.|+..+........++ +...-++---+.++...+..+|.++.+++.
T Consensus 298 iiG~iag~v~~~~~~~~-~~~~iDD~~~~~~vHg~~Gi~G~i~~glf~ 344 (404)
T TIGR03644 298 LIGAVGGVIVVFSIVLL-DKLKIDDPVGAISVHGVAGIWGTLVVPITN 344 (404)
T ss_pred HHHHHHHHHHHHHHHHH-HhCCCCCCcCchHhhhHHHHHHHHHHHHhc
Confidence 33433333333333333 445445555667776666666666665554
No 365
>TIGR00836 amt ammonium transporter. The mechanism of energy coupling, if any, to methyl-NH2 or NH3 uptake by the AmtB protein of E. coli is not entirely clear. NH4+ uniport driven by the pmf, energy independent NH3 facilitation, and NH4+/K+ antiport have been proposed as possible transport mechanisms. In Corynebacterium glutamicum and Arabidopsis thaliana, uptake via the Amt1 homologues of AmtB has been reported to be driven by the pmf.
Probab=25.19 E-value=6.1e+02 Score=24.26 Aligned_cols=48 Identities=21% Similarity=0.258 Sum_probs=26.5
Q ss_pred HHHhhcccchHhHHHHHHhcCCCCchhhHHHHHHhhhhhHHHHHHhhH
Q 014481 212 LVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLA 259 (423)
Q Consensus 212 l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~ 259 (423)
+.|+..+........++.+...-++---+.++...+..+|.++.++++
T Consensus 284 viG~iag~~~~~~~~~l~~~~~iDD~~~~~~vHg~~Gi~G~i~~glfa 331 (403)
T TIGR00836 284 IIGLVAGVLCYLAVSKLKKKLKIDDPLDAFAVHGVGGIWGLIATGLFA 331 (403)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCCCcccchhhhhhHHHHHHHHHHhc
Confidence 344444444344444455555545554567777776666766666554
No 366
>PF13937 DUF4212: Domain of unknown function (DUF4212)
Probab=25.13 E-value=2.5e+02 Score=19.76 Aligned_cols=35 Identities=17% Similarity=0.136 Sum_probs=20.7
Q ss_pred hhhHHHHHHhhHHHhh--hccCchHHHHHHHHHHHHH
Q 014481 248 LSFGSVAGLLLAPPII--ENLGWESVFYIFGLLGIAW 282 (423)
Q Consensus 248 ~~~g~~~g~~~~~~l~--~~~gw~~~~~~~~~~~~~~ 282 (423)
..+...+|+.++..+. ...||...||+.+--+++.
T Consensus 22 ~vvsfg~~~lfa~~Ln~~~~~GfPlgfw~aaQGsi~~ 58 (81)
T PF13937_consen 22 FVVSFGVGILFADELNQITFGGFPLGFWFAAQGSIIV 58 (81)
T ss_pred HHHHHHHHHHHHHHHcCCeeCCCChHHHHHHHhHHHH
Confidence 3334444455555553 2458999999866655544
No 367
>PF05232 BTP: Bacterial Transmembrane Pair family; InterPro: IPR007896 This domain represents a conserved pair of transmembrane helices. It appears to be found as two tandem repeats in a family of hypothetical proteins.
Probab=24.95 E-value=2.2e+02 Score=19.09 Aligned_cols=48 Identities=15% Similarity=0.111 Sum_probs=37.4
Q ss_pred hhhhhHHHhhhhhCCCcchhhHHHHHHHHHHHhhhhhhhhHhhHhcCc
Q 014481 132 NLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGR 179 (423)
Q Consensus 132 ~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r 179 (423)
.+....|.+.--+|.+..+.+.+.....+...+-..+..++-||+-+|
T Consensus 17 ~l~~~~P~~a~~~~~~~~~a~~l~v~~s~~a~~wn~ifN~~FD~~~~r 64 (67)
T PF05232_consen 17 ALLISVPLIAWWLGISLWQAGALDVGLSLFAMVWNYIFNWLFDKIEPR 64 (67)
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 334445666666788888888888888888888899999999997654
No 368
>PF11283 DUF3084: Protein of unknown function (DUF3084); InterPro: IPR021435 This bacterial family of proteins has no known function.
Probab=24.21 E-value=1.3e+02 Score=20.97 Aligned_cols=25 Identities=8% Similarity=0.100 Sum_probs=15.2
Q ss_pred HHHHHHHHHHhHHhhhcCCccceee
Q 014481 386 VLVTSIAAQFADNLIATGVETTMVR 410 (423)
Q Consensus 386 ~~~~~~~g~l~dr~~~r~~~~~~~~ 410 (423)
-+-+.++-++..|.|+|+.+...+|
T Consensus 14 G~IA~~GD~iG~kvGKkrlslFgLR 38 (79)
T PF11283_consen 14 GLIAYLGDRIGSKVGKKRLSLFGLR 38 (79)
T ss_pred HHHHHHHHHHHHHHhHHHhhhhcCC
Confidence 3344567777777777776544433
No 369
>PRK04972 putative transporter; Provisional
Probab=24.18 E-value=7.5e+02 Score=24.92 Aligned_cols=92 Identities=13% Similarity=0.096 Sum_probs=42.2
Q ss_pred hhhHHHHHHHHHHHhhhhhhhhHhhHhcCchHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhhcccchHhHHHHHH
Q 014481 150 VAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIA 229 (423)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~i~ 229 (423)
+.|+...+..+|...|.-+..-+.+ .|-+. +.++.++..+..++..+......-+=..+.+-.++.+...++..+++.
T Consensus 446 ~~GL~lFla~vGl~aG~~f~~~~~~-~g~~~-~~~g~~~t~~~~~~~~~~~~~~~k~~~~~~~G~~aG~~t~~~~l~~~~ 523 (558)
T PRK04972 446 EFGLMVFMAGVGLSAGSGINNGLGA-VGGQM-LIAGLIVSLVPVVICFLFGAYVLRMNRALLFGAIMGARTCAPAMEIIS 523 (558)
T ss_pred HHhHHHHHHHHHHhhhHHHHHHHHH-hhHHH-HHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHhCCCCCcHHHHHHH
Confidence 4555555666666666655555533 34333 234444433333332222222111112233333445556667777777
Q ss_pred hcCCCCchhhHHHH
Q 014481 230 RSIPLEERSRAVSF 243 (423)
Q Consensus 230 ~~~~~~~r~~~~~~ 243 (423)
+....+.-...++.
T Consensus 524 ~~~~~~~~~~gYa~ 537 (558)
T PRK04972 524 DTARSNIPALGYAG 537 (558)
T ss_pred hhcCCCCcccccHh
Confidence 77654433333333
No 370
>PTZ00101 rhomboid-1 protease; Provisional
Probab=23.57 E-value=5.4e+02 Score=23.11 Aligned_cols=35 Identities=17% Similarity=0.088 Sum_probs=19.8
Q ss_pred HHHHHhhhhhhhhHhhH-hcCchHHHHHHHHHHHHH
Q 014481 159 FWGYALSQLPGGWLAKI-FGGRKVLQTGVLIWSLAT 193 (423)
Q Consensus 159 ~~~~~~~~~~~g~l~dr-~G~r~~~~~~~~~~~~~~ 193 (423)
.+..++.....|...+| +|+++..++-.+.-..+.
T Consensus 118 Ll~Nm~~l~~~G~~lE~~~G~~r~~ilYl~sGi~G~ 153 (278)
T PTZ00101 118 TFFNVFFQLRMGFTLEKNYGIVKIIILYFLTGIYGN 153 (278)
T ss_pred HHHHHHHHHHHHHHHHHHHChHHHHHHHHHHHHHHH
Confidence 34445555666666655 788887754443333333
No 371
>COG2836 Uncharacterized conserved protein [Function unknown]
Probab=21.51 E-value=5.4e+02 Score=22.28 Aligned_cols=33 Identities=18% Similarity=0.075 Sum_probs=26.8
Q ss_pred CCChhhHHHHHHHHHHHHHHHHHHHHHHhHHhh
Q 014481 368 SLNLTEAAWVSILPPLASVLVTSIAAQFADNLI 400 (423)
Q Consensus 368 g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~ 400 (423)
--|+.+-+.++..++++....-+..|..++++.
T Consensus 160 tgS~~~Gal~mlaFGlGTlP~ll~~G~~s~~~s 192 (232)
T COG2836 160 TGSAFEGALVMLAFGLGTLPNLLAMGIFSSKLS 192 (232)
T ss_pred cCCHHHHHHHHHHHhhcccHHHHHHHHHHHHHH
Confidence 356777888888899998888888888888765
No 372
>PF07760 DUF1616: Protein of unknown function (DUF1616); InterPro: IPR011674 This is a group of sequences from hypothetical archaeal proteins. The region in question is approximately 330 amino acid residues long.
Probab=21.13 E-value=6.1e+02 Score=22.81 Aligned_cols=56 Identities=13% Similarity=0.078 Sum_probs=31.5
Q ss_pred HHHHHHHHHhhcccchHhHHHHHHhcCCCCchhhHHHHHHhhhhhHHHHHHhhHHHh
Q 014481 206 LVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPI 262 (423)
Q Consensus 206 ~~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l 262 (423)
.-..|.+.|+-.-. +...++++.-.||.+++--..--.....+++.++-|++|-.+
T Consensus 22 ~~~lr~~~g~~~vl-f~PGy~l~~~lfp~~~~l~~~er~~ls~glSi~~~~~~g~~l 77 (287)
T PF07760_consen 22 IPPLRVILGFPFVL-FLPGYALVAALFPRKHDLDGIERLALSVGLSIAIVPLIGLLL 77 (287)
T ss_pred hhHHHHHHHHHHHH-HhccHHHHHHHccCcCCCcHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34567777766533 355688888899855443333333444444455555554443
No 373
>PF03773 DUF318: Predicted permease; InterPro: IPR005524 This family of predicted integral membrane proteins.
Probab=21.07 E-value=6.3e+02 Score=22.94 Aligned_cols=22 Identities=14% Similarity=0.300 Sum_probs=11.0
Q ss_pred HHHHHhhHHHhhhccCchHHHH
Q 014481 252 SVAGLLLAPPIIENLGWESVFY 273 (423)
Q Consensus 252 ~~~g~~~~~~l~~~~gw~~~~~ 273 (423)
..+.|.........+||+.+.+
T Consensus 94 p~~n~~~~~~~~~~lg~~~~~~ 115 (307)
T PF03773_consen 94 PLLNPIVLLLTWAALGWKFTLI 115 (307)
T ss_pred HHhhHHHHHHHHHHhCcHHHHH
Confidence 3344444444444567776544
No 374
>PF02447 GntP_permease: GntP family permease; InterPro: IPR003474 This is a family of integral membrane permeases that are involved in gluconate uptake. Escherichia coli contains several members of this family including GntU, a low affinity transporter [] and GntT, a high affinity transporter [].; GO: 0015128 gluconate transmembrane transporter activity, 0035429 gluconate transmembrane transport, 0016020 membrane
Probab=20.63 E-value=7.9e+02 Score=23.87 Aligned_cols=74 Identities=18% Similarity=0.309 Sum_probs=43.7
Q ss_pred hHHHHHHHHHHHHHhhcccchHhHHHHHHhcCCCCchhhHHHHHHhhhhhHHHHHHhh---------HHHhhhccCchHH
Q 014481 201 GFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLL---------APPIIENLGWESV 271 (423)
Q Consensus 201 ~~~~~~~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~---------~~~l~~~~gw~~~ 271 (423)
+.+..+++.-++.|+..|....-....+. +.-|..++-......+|.++|-.+ +..+.+.+|.+..
T Consensus 23 hpF~aLl~~al~~gl~~G~~~~~i~~~i~-----~GfG~tl~~igivI~lG~~iG~~l~~SGaa~~IA~~l~~~~G~k~~ 97 (441)
T PF02447_consen 23 HPFLALLIVALIVGLLAGMPPEEIVKSIT-----KGFGSTLGSIGIVIALGAMIGKLLEESGAAERIANTLLKKFGEKRA 97 (441)
T ss_pred hHHHHHHHHHHHHHHHcCCCHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHcCCCcc
Confidence 44567777888888887765443333332 345666677777777777777764 3344455666544
Q ss_pred HHHHHHHH
Q 014481 272 FYIFGLLG 279 (423)
Q Consensus 272 ~~~~~~~~ 279 (423)
-|..++.+
T Consensus 98 ~~A~~i~g 105 (441)
T PF02447_consen 98 PLALAITG 105 (441)
T ss_pred cHHHHHHH
Confidence 34333333
No 375
>PF06123 CreD: Inner membrane protein CreD; InterPro: IPR010364 This family consists of several bacterial CreD or Cet inner membrane proteins. Dominant mutations of the cet gene of Escherichia coli result in tolerance to colicin E2 and increased amounts of an inner membrane protein with a Mr of 42,000. The cet gene is shown to be in the same operon as the phoM gene, which is required in a phoR background for expression of the structural gene for alkaline phosphatase, phoA. Although the Cet protein is not required for phoA expression, it has been suggested that the Cet protein has an enhancing effect on the transcription of phoA [].
Probab=20.60 E-value=7.8e+02 Score=23.81 Aligned_cols=74 Identities=14% Similarity=0.132 Sum_probs=35.4
Q ss_pred hhhhhhHhhHhcCchHHHHHHHHHHHHHH----HHHHhhhHHHHHHHHHHHHHhhcccchHhHHHHHHhcCCCCchhhHH
Q 014481 166 QLPGGWLAKIFGGRKVLQTGVLIWSLATA----LLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAV 241 (423)
Q Consensus 166 ~~~~g~l~dr~G~r~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~ 241 (423)
.+..=.+.+...++++-.+-.++.+++.. ++..++.+ ..+..+..+...+ +......|+.......+|+..+
T Consensus 308 TF~~fflfE~~~~~~iHpiQY~LVGlAl~lFYlLLLSlSEh-i~F~~AYliAa~a---~i~Li~~Y~~~vl~~~k~~~~~ 383 (430)
T PF06123_consen 308 TFLAFFLFELLSKLRIHPIQYLLVGLALVLFYLLLLSLSEH-IGFNLAYLIAALA---CIGLISLYLSSVLKSWKRGLIF 383 (430)
T ss_pred HHHHHHHHHHHhcCcccHHHHHHHHHHHHHHHHHHHHHHhh-hchHHHHHHHHHH---HHHHHHHHHHHHHhcchHHHHH
Confidence 33344466666666665444444333332 22234444 2233333333322 2344456666777666666655
Q ss_pred HH
Q 014481 242 SF 243 (423)
Q Consensus 242 ~~ 243 (423)
+.
T Consensus 384 ~~ 385 (430)
T PF06123_consen 384 AG 385 (430)
T ss_pred HH
Confidence 43
Done!