Query 014483
Match_columns 423
No_of_seqs 125 out of 1183
Neff 7.8
Searched_HMMs 46136
Date Fri Mar 29 05:35:14 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/014483.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/014483hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN00134 fumarate hydratase; P 100.0 1.3E-97 3E-102 761.1 47.2 423 1-423 32-456 (458)
2 PRK12425 fumarate hydratase; P 100.0 7.1E-97 2E-101 756.1 47.0 422 1-422 38-461 (464)
3 TIGR00979 fumC_II fumarate hyd 100.0 1.3E-94 2.8E-99 739.1 46.3 419 1-420 37-458 (458)
4 PRK00485 fumC fumarate hydrata 100.0 3.6E-94 7.8E-99 739.0 46.9 420 1-422 40-463 (464)
5 PRK13353 aspartate ammonia-lya 100.0 2.3E-93 5.1E-98 733.2 45.7 421 1-422 41-463 (473)
6 PRK14515 aspartate ammonia-lya 100.0 5.9E-93 1.3E-97 727.3 46.5 421 1-422 47-469 (479)
7 PRK12273 aspA aspartate ammoni 100.0 1.1E-91 2.3E-96 720.8 45.5 419 2-421 44-464 (472)
8 cd01357 Aspartase Aspartase. T 100.0 2.6E-90 5.6E-95 707.4 45.8 413 1-414 36-450 (450)
9 TIGR00839 aspA aspartate ammon 100.0 3.4E-90 7.5E-95 706.7 46.6 420 1-422 38-461 (468)
10 cd01362 Fumarase_classII Class 100.0 3E-89 6.5E-94 699.7 47.3 417 1-417 36-454 (455)
11 COG0114 FumC Fumarase [Energy 100.0 6.5E-88 1.4E-92 646.4 44.6 422 1-422 39-462 (462)
12 cd01596 Aspartase_like asparta 100.0 1.9E-87 4E-92 685.0 46.7 413 1-414 36-450 (450)
13 COG1027 AspA Aspartate ammonia 100.0 2.9E-85 6.3E-90 626.2 41.5 419 2-421 43-463 (471)
14 COG0165 ArgH Argininosuccinate 100.0 1.7E-80 3.7E-85 617.3 36.6 391 2-421 28-434 (459)
15 PRK09053 3-carboxy-cis,cis-muc 100.0 9.3E-80 2E-84 632.0 39.4 397 2-422 23-436 (452)
16 PLN02646 argininosuccinate lya 100.0 1.7E-77 3.6E-82 615.4 39.6 389 2-422 41-448 (474)
17 TIGR00838 argH argininosuccina 100.0 2.5E-77 5.4E-82 614.9 40.7 393 2-422 24-432 (455)
18 PRK06705 argininosuccinate lya 100.0 2.4E-77 5.2E-82 618.1 39.0 391 2-423 34-450 (502)
19 PRK07492 adenylosuccinate lyas 100.0 2.4E-77 5.3E-82 608.7 38.0 391 2-422 16-424 (435)
20 cd01597 pCLME prokaryotic 3-ca 100.0 4.8E-77 1E-81 610.7 38.6 394 2-422 17-427 (437)
21 PRK08470 adenylosuccinate lyas 100.0 8.6E-77 1.9E-81 607.0 38.1 387 2-422 16-433 (442)
22 cd01359 Argininosuccinate_lyas 100.0 2.7E-76 5.8E-81 605.2 38.6 389 2-422 5-413 (435)
23 PRK00855 argininosuccinate lya 100.0 7.1E-76 1.5E-80 604.3 40.4 391 1-422 28-436 (459)
24 PRK07380 adenylosuccinate lyas 100.0 6.5E-76 1.4E-80 597.6 39.5 388 2-422 16-422 (431)
25 TIGR00928 purB adenylosuccinat 100.0 2.6E-76 5.5E-81 604.6 36.7 390 2-421 16-427 (435)
26 PRK08540 adenylosuccinate lyas 100.0 4.7E-76 1E-80 604.5 36.1 393 2-422 21-433 (449)
27 COG0015 PurB Adenylosuccinate 100.0 2E-75 4.3E-80 583.1 37.8 387 2-421 16-427 (438)
28 PRK04833 argininosuccinate lya 100.0 8.5E-75 1.9E-79 594.2 39.8 390 3-422 22-434 (455)
29 KOG1317 Fumarase [Energy produ 100.0 7.6E-75 1.7E-79 540.9 34.8 422 1-422 66-487 (487)
30 cd03302 Adenylsuccinate_lyase_ 100.0 1E-73 2.2E-78 583.8 39.2 391 2-421 16-436 (436)
31 PRK06390 adenylosuccinate lyas 100.0 8.4E-74 1.8E-78 587.3 36.5 393 2-421 21-430 (451)
32 cd01595 Adenylsuccinate_lyase_ 100.0 7.1E-74 1.5E-78 577.6 32.9 358 2-386 7-375 (381)
33 PRK12308 bifunctional arginino 100.0 6.5E-72 1.4E-76 594.5 38.6 389 2-421 21-439 (614)
34 cd01360 Adenylsuccinate_lyase_ 100.0 9.7E-72 2.1E-76 562.1 35.7 352 2-386 13-374 (387)
35 PRK02186 argininosuccinate lya 100.0 5.6E-71 1.2E-75 609.6 38.9 370 2-400 434-817 (887)
36 KOG1316 Argininosuccinate lyas 100.0 8.4E-72 1.8E-76 524.2 26.3 385 3-421 32-436 (464)
37 TIGR02426 protocat_pcaB 3-carb 100.0 1.8E-69 4E-74 536.0 33.5 321 2-350 17-338 (338)
38 cd01334 Lyase_I Lyase class I 100.0 3E-69 6.5E-74 533.8 34.1 323 6-353 1-325 (325)
39 PRK06389 argininosuccinate lya 100.0 2.9E-68 6.2E-73 535.1 34.6 355 2-396 28-391 (434)
40 PRK09285 adenylosuccinate lyas 100.0 4.2E-68 9.2E-73 542.8 34.0 390 2-421 29-447 (456)
41 cd01598 PurB PurB_like adenylo 100.0 6.8E-67 1.5E-71 528.5 37.2 390 2-420 7-424 (425)
42 PRK05975 3-carboxy-cis,cis-muc 100.0 3.1E-67 6.7E-72 521.4 33.9 321 2-352 26-347 (351)
43 PLN02848 adenylosuccinate lyas 100.0 1.8E-64 3.9E-69 515.3 37.4 389 2-421 32-450 (458)
44 PF00206 Lyase_1: Lyase; Inte 100.0 8.5E-63 1.8E-67 485.0 23.1 286 3-301 17-312 (312)
45 KOG2700 Adenylosuccinate lyase 100.0 1.5E-43 3.2E-48 344.5 23.7 392 4-421 28-449 (481)
46 cd01594 Lyase_I_like Lyase cla 100.0 1E-35 2.2E-40 280.7 26.7 165 91-313 35-201 (231)
47 PRK08937 adenylosuccinate lyas 100.0 1.7E-30 3.7E-35 243.0 18.6 178 239-420 22-216 (216)
48 PF10415 FumaraseC_C: Fumarase 98.7 1.6E-08 3.4E-13 73.1 3.6 55 367-421 1-55 (55)
49 PF10397 ADSL_C: Adenylosuccin 98.2 2E-06 4.3E-11 67.6 4.3 56 367-422 9-73 (81)
50 PF14698 ASL_C2: Argininosucci 96.4 0.0014 3E-08 49.9 1.2 54 366-420 2-69 (70)
51 PF08328 ASL_C: Adenylosuccina 96.4 0.018 3.9E-07 47.6 7.7 103 315-419 3-115 (115)
52 KOG2700 Adenylosuccinate lyase 94.1 0.3 6.4E-06 49.6 9.3 35 272-306 325-359 (481)
53 PF10925 DUF2680: Protein of u 72.2 16 0.00035 26.7 5.9 39 3-41 10-49 (59)
54 PF02022 Integrase_Zn: Integra 36.3 31 0.00068 23.1 2.0 22 17-38 12-34 (40)
55 PF05924 SAMP: SAMP Motif; In 34.0 13 0.00027 21.0 -0.1 10 276-285 10-19 (20)
56 CHL00180 rbcR LysR transcripti 28.5 2.2E+02 0.0048 27.2 7.6 58 136-194 45-102 (305)
57 PRK12683 transcriptional regul 20.1 4.3E+02 0.0093 25.4 7.8 48 136-183 42-89 (309)
No 1
>PLN00134 fumarate hydratase; Provisional
Probab=100.00 E-value=1.3e-97 Score=761.10 Aligned_cols=423 Identities=88% Similarity=1.271 Sum_probs=406.7
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHcC-CCHHHHHHHHHHHHHHHccccCCCCcccccccCcccccccchHHHHHHHHHHHhC
Q 014483 1 MPEPIVRAFGILKKCAAKVNMEYG-LDPAIGKAIMQAAQEVAEGKLNDHFPLVVWQTGSGTQSNMNANEVIANRAAEILG 79 (423)
Q Consensus 1 ~~~~~~~~~~~ve~A~a~a~~~~g-ip~~~a~~I~~a~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ie~~l~~~~g 79 (423)
+|+++|++|+.|++||+.++.+.| ||++++++|.++|+++.++...++|+++++|++.+++.++++|+|||+++++.+|
T Consensus 32 ~~~~~i~a~~~v~~A~a~~l~~~G~l~~~~a~~I~~al~ei~~~~~~~~f~~~~~~~g~g~~~~~~v~evie~~l~e~~g 111 (458)
T PLN00134 32 MPEPIVRAFGIVKKAAAKVNMEYGLLDPDIGKAIMQAADEVAEGKLDDHFPLVVWQTGSGTQTNMNANEVIANRAAEILG 111 (458)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHcCcccCCccccccccCCcccccCcHHHHHHHHHHHHhC
Confidence 578999999999999999999999 9999999999999999987777899999999999999999999999999999999
Q ss_pred ccCCCcc-cccccccCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcceecccCCCCCcCCChhH
Q 014483 80 HKRGEKI-VHPNDHVNRSQSSNDTFPTVMHIAAAMETNSRLIPNLKVLHNSLHSKSVEFKDIVKIGRTHTQDATPLTLGQ 158 (423)
Q Consensus 80 ~~~g~~~-~h~~~~v~~g~S~nDi~~Ta~~l~~~~~~~~~l~~~l~~l~~~L~~~A~~~~~~~m~grTh~Q~A~P~T~G~ 158 (423)
++.|+|. +||++|||+|+||||+++|+++|+++++++..+.+.|..|+++|.++|++|+||+||||||+|+||||||||
T Consensus 112 ~~~g~~~~lHp~d~vh~G~S~nDiv~Ta~~L~~~~~~~~~l~~~l~~l~~~L~~~A~~~~~t~m~grTH~Q~A~P~T~G~ 191 (458)
T PLN00134 112 GPVGEKSPVHPNDHVNRSQSSNDTFPTAMHIAAATEIHSRLIPALKELHESLRAKSFEFKDIVKIGRTHLQDAVPLTLGQ 191 (458)
T ss_pred cccCCccccCcccccCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccccccCCCeeecHHH
Confidence 7788775 999999999999999999999999887777899999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhhhcccccccccCCCCCCCcchHHHHHHHHHHcCCCCCcCCchhHHhhhchHHHHHHH
Q 014483 159 EFSGYTTQVKYGIDRVICCLPRMYQLAQGGTAVGTGLNTKKGFDVKIASAVAEETSLPFVTAENKFEALAAHDAFVETSG 238 (423)
Q Consensus 159 ~~a~~~~~l~r~~~rL~~~~~r~~~~~lGg~A~Gt~~~~~~~~~~~~~~~la~~LGl~~~~~~n~~da~~~rd~~~e~~~ 238 (423)
|+++|+++|.|+++||.+++++++.+||||||+||++++++.|+.++++++++.|||+.++.+|++|++++||+++++++
T Consensus 192 ~~~~~~~~l~r~~~RL~~~~~~~~~~~lGg~AvGT~~~~~~~~~~~v~~~la~~LGl~~~~~~n~~da~~~rD~~~e~~~ 271 (458)
T PLN00134 192 EFSGYATQVKYGLNRVQCTLPRLYELAQGGTAVGTGLNTKKGFDEKIAAAVAEETGLPFVTAPNKFEALAAHDAFVELSG 271 (458)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeeecCCccCChhHHHHHHHHHHHHhCCCCCCCccHHHHhcCCHHHHHHHH
Confidence 99999999999999999999999999999988999999999999999999999999998778999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCcceeEecCCCCCCCCCCCCCCChhHHHHHHHHHHHhhhhhHHHhhhhcCcccccc
Q 014483 239 ALNTVAASLMKIANDVRLLGSGPRCGLGELILPENEPGSSIMPGKVNPTQCEALTMVCAQVIGNHVAITVGGSNGHFELN 318 (423)
Q Consensus 239 ~l~~~~~~L~ria~Dl~~~~s~~r~e~gev~~~~~~~gSS~MPqKrNP~~~E~i~~~a~~~~g~~~~~~~~~~~~~~e~~ 318 (423)
+++.++++|+|||+||++|+|+||+||||+.+|+.++|||||||||||+.+|.++++|+++.|++.+++.....++++.+
T Consensus 272 ~l~~la~~L~kia~Dl~llss~p~~e~gev~lp~~~~GSSiMP~KrNPv~~E~i~~~a~~v~g~~~~~~~~~~~~~~~~~ 351 (458)
T PLN00134 272 ALNTVAVSLMKIANDIRLLGSGPRCGLGELNLPENEPGSSIMPGKVNPTQCEALTMVCAQVMGNHVAITVGGSAGHFELN 351 (458)
T ss_pred HHHHHHHHHHHHHHHHHHHhccccCCcceEECCCCCCCCCCCCCCcCCHHHHHHHHHHHHHHhHHHHHHHHHhcCCchhh
Confidence 99999999999999999999999999999999988899999999999999999999999999999999876778888887
Q ss_pred cchhhhHhhhhhHHHHHHHHHHHHHHHhhhCceeCHHHHHHHHHhhhhHHHhhcccccHHHHHHHHHHHHHcCCCHHHHH
Q 014483 319 VFKPMIASGLLHSLRLLGDASASFEKNCVRGIQANRERISKLLHESLMLVTSLNPKIGYDNAAAVAKKAHKEGTTLKDAA 398 (423)
Q Consensus 319 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~l~v~~~rm~~~l~~~~~~~~~la~~~g~~~a~~~~~~a~~~g~~l~e~~ 398 (423)
..++++.|.++++++.+.+++..++..|+++|+||++||++|++.+++++++|++++||+.|+++++++.++|++++|++
T Consensus 352 ~~~~~i~~~~l~~~~~~~~~~~~~~~~~l~~l~vn~erm~~~l~~~~~l~~~La~~ig~~~A~~~~~~a~~~g~~l~e~~ 431 (458)
T PLN00134 352 VFKPLIAYNLLHSIRLLGDASASFRKNCVRGIEANRERISKLLHESLMLVTALNPKIGYDKAAAVAKKAHKEGTTLKEAA 431 (458)
T ss_pred ccchHHHHHHHHHHHHHHHHHHHHHHHHHccCEECHHHHHHHHHhccchHHHhhhccCHHHHHHHHHHHHHhCCCHHHHH
Confidence 77888889999999999999999988999999999999999999999999999999999999999999999999999999
Q ss_pred HHcCCCCHHHHhhccCcccccCCCC
Q 014483 399 LKLGVLNSEEFDNLVVPEKMIGPSD 423 (423)
Q Consensus 399 ~~~~~l~~~~l~~~~dp~~~~g~~~ 423 (423)
.+.+.++++++++++||.+|+|++|
T Consensus 432 ~~~~~l~~~el~~~ldP~~~~~~~~ 456 (458)
T PLN00134 432 LKLGVLTAEEFDELVVPEKMTGPSD 456 (458)
T ss_pred HhcCCCCHHHHHHHcCHHHhcCCCC
Confidence 9989999999999999999999876
No 2
>PRK12425 fumarate hydratase; Provisional
Probab=100.00 E-value=7.1e-97 Score=756.08 Aligned_cols=422 Identities=57% Similarity=0.891 Sum_probs=403.9
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHcC-CCHHHHHHHHHHHHHHHccccCCCCcccccccCcccccccchHHHHHHHHHHHhC
Q 014483 1 MPEPIVRAFGILKKCAAKVNMEYG-LDPAIGKAIMQAAQEVAEGKLNDHFPLVVWQTGSGTQSNMNANEVIANRAAEILG 79 (423)
Q Consensus 1 ~~~~~~~~~~~ve~A~a~a~~~~g-ip~~~a~~I~~a~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ie~~l~~~~g 79 (423)
+|+++|+++..|++|||.++.+.| ||++++++|.++|++|.++..+++|+++.++.+++||+|+|+|+||++++.+++|
T Consensus 38 ~~~~~i~a~~~ik~Aha~~l~~~G~l~~~~~~~I~~al~ei~~~~~~~~f~~~~~~~g~~ed~~mnvnevi~~~~~e~~G 117 (464)
T PRK12425 38 MPLAVLHALALIKKAAARVNDRNGDLPADIARLIEQAADEVLDGQHDDQFPLVVWQTGSGTQSNMNVNEVIAGRANELAG 117 (464)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHcCcccCCCCccCCCCCCcchHHHHHHHHHHHHHHHHhC
Confidence 689999999999999999999999 9999999999999999988778899999999999999999999999999999999
Q ss_pred ccCCCcc-cccccccCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcceecccCCCCCcCCChhH
Q 014483 80 HKRGEKI-VHPNDHVNRSQSSNDTFPTVMHIAAAMETNSRLIPNLKVLHNSLHSKSVEFKDIVKIGRTHTQDATPLTLGQ 158 (423)
Q Consensus 80 ~~~g~~~-~h~~~~v~~g~S~nDi~~Ta~~l~~~~~~~~~l~~~l~~l~~~L~~~A~~~~~~~m~grTh~Q~A~P~T~G~ 158 (423)
++.|++. +||++|||+||||||+++|+++|++++.+...+.+.|..|+++|.++|++|++|+||||||+|+||||||||
T Consensus 118 ~~~g~~~~vhpn~~vh~g~S~ND~~~Ta~~L~~r~~l~~~l~~~L~~l~~~L~~~A~~~~~tim~GrTHlQ~A~PiT~G~ 197 (464)
T PRK12425 118 NGRGGKSPVHPNDHVNRSQSSNDCFPTAMHIAAAQAVHEQLLPAIAELSGGLAEQSARHAKLVKTGRTHMMDATPITFGQ 197 (464)
T ss_pred cccccccccCchhcccCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCeeecccccccCccchHHH
Confidence 7677443 999999999999999999999999876542589999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhhhcccccccccCCCCCCCcchHHHHHHHHHHcCCCCCcCCchhHHhhhchHHHHHHH
Q 014483 159 EFSGYTTQVKYGIDRVICCLPRMYQLAQGGTAVGTGLNTKKGFDVKIASAVAEETSLPFVTAENKFEALAAHDAFVETSG 238 (423)
Q Consensus 159 ~~a~~~~~l~r~~~rL~~~~~r~~~~~lGg~A~Gt~~~~~~~~~~~~~~~la~~LGl~~~~~~n~~da~~~rd~~~e~~~ 238 (423)
||++|+++|.|+++||.+++++++.+|+||||+||++++++.|+..+.+.+++.|||+.++.+|++|++++||+++++++
T Consensus 198 ~~~a~~~~l~rd~~RL~~~~~r~~~~plGggAvGT~~~~~~~~~~~~~~~La~~LG~~~~~~~n~~da~~~rD~~~e~~~ 277 (464)
T PRK12425 198 ELSAFVAQLDYAERAIRAALPAVCELAQGGTAVGTGLNAPHGFAEAIAAELAALSGLPFVTAPNKFAALAGHEPLVSLSG 277 (464)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchhcCcccCCccHHHHHHHHHHHHhCCCCcccccHHHHhcccHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999998778999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCcceeEecCCCCCCCCCCCCCCChhHHHHHHHHHHHhhhhhHHHhhhhcCcccccc
Q 014483 239 ALNTVAASLMKIANDVRLLGSGPRCGLGELILPENEPGSSIMPGKVNPTQCEALTMVCAQVIGNHVAITVGGSNGHFELN 318 (423)
Q Consensus 239 ~l~~~~~~L~ria~Dl~~~~s~~r~e~gev~~~~~~~gSS~MPqKrNP~~~E~i~~~a~~~~g~~~~~~~~~~~~~~e~~ 318 (423)
++++++++|+|||+||++|+|+||+||||+.+|+.++|||||||||||+.+|.++++|+++.|++.+++....+++++.+
T Consensus 278 ~l~~la~~L~kia~Dl~llsS~p~~g~~ei~lp~~~~GSSiMPqK~NP~~~E~i~~~a~~v~G~~~~v~~~~~~~~~q~n 357 (464)
T PRK12425 278 ALKTLAVALMKIANDLRLLGSGPRAGLAEVRLPANEPGSSIMPGKVNPTQCEALSMLACQVMGNDATIGFAASQGHLQLN 357 (464)
T ss_pred HHHHHHHHHHHHHHHHHHHccCccCCceEEECCCCCCCCCCCCCCcCCHHHHHHHHHHHHHHhHHHHHHHHHhcCCchhh
Confidence 99999999999999999999999999999999988999999999999999999999999999999999998888899888
Q ss_pred cchhhhHhhhhhHHHHHHHHHHHHHHHhhhCceeCHHHHHHHHHhhhhHHHhhcccccHHHHHHHHHHHHHcCCCHHHHH
Q 014483 319 VFKPMIASGLLHSLRLLGDASASFEKNCVRGIQANRERISKLLHESLMLVTSLNPKIGYDNAAAVAKKAHKEGTTLKDAA 398 (423)
Q Consensus 319 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~l~v~~~rm~~~l~~~~~~~~~la~~~g~~~a~~~~~~a~~~g~~l~e~~ 398 (423)
..++.+.+.++++++.+.++++.++..|+++|+||++||++|++.++.++++|++++||+.||++++++.++|++++|++
T Consensus 358 ~~~~~~~~~~l~s~~~l~~~~~~~~~~~i~~l~vn~erm~~~l~~~~~~at~L~~~ig~~~A~~ia~~a~~~g~~l~e~~ 437 (464)
T PRK12425 358 VFKPVIIHNLLQSIRLLADGCRNFQQHCVAGLEPDAEQMAAHLERGLMLVTALNPHIGYDKAAEIAKKAYAEGTTLREAA 437 (464)
T ss_pred hcchHHHHHHHHHHHHHHHHHHHHHHHHHccCEECHHHHHHHHHcccHHHHHhhhccCHHHHHHHHHHHHHhCCCHHHHH
Confidence 77887888899999999999999988999999999999999999999999999999999999999999999999999999
Q ss_pred HHcCCCCHHHHhhccCcccccCCC
Q 014483 399 LKLGVLNSEEFDNLVVPEKMIGPS 422 (423)
Q Consensus 399 ~~~~~l~~~~l~~~~dp~~~~g~~ 422 (423)
.+.+.++++++++++||.+|+|+.
T Consensus 438 ~~~~~l~~~el~~~ldP~~~~~~~ 461 (464)
T PRK12425 438 LALGYLTDEQFDAWVRPENMLEAG 461 (464)
T ss_pred HhcCCCCHHHHHHHcCHHHhcCCC
Confidence 998999999999999999999863
No 3
>TIGR00979 fumC_II fumarate hydratase, class II. Putative fumarases from several species (Mycobacterium tuberculosis, Streptomyces coelicolor, Pseudomonas aeruginosa) branch deeply, although within the same branch of a phylogenetic tree rooted by aspartate ammonia-lyase sequences, and score between the trusted and noise cutoffs.
Probab=100.00 E-value=1.3e-94 Score=739.15 Aligned_cols=419 Identities=69% Similarity=1.065 Sum_probs=398.5
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHcC-CCHHHHHHHHHHHHHHHccccCCCCcccccccCcccccccchHHHHHHHHHHHhC
Q 014483 1 MPEPIVRAFGILKKCAAKVNMEYG-LDPAIGKAIMQAAQEVAEGKLNDHFPLVVWQTGSGTQSNMNANEVIANRAAEILG 79 (423)
Q Consensus 1 ~~~~~~~~~~~ve~A~a~a~~~~g-ip~~~a~~I~~a~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ie~~l~~~~g 79 (423)
++++++++|++||.|++.+|.+.| ||++++++|.++|+++.++..++.|+.+..+++.++++|+|+|++|++++.+.+|
T Consensus 37 ~~~~~i~a~~~ve~A~a~a~~~~Giip~~~a~~I~~a~~~i~~~~~~~~~~~~~~~~~~~~~~~m~~~~via~~l~e~~g 116 (458)
T TIGR00979 37 MPLELIHAFAILKKAAAIVNEDLGKLDAKKADAIVQAADEILAGKLDDHFPLVVWQTGSGTQSNMNVNEVIANRAIELLG 116 (458)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHhccccCCCceecccccccccccccHHHHHHHHHHHHcC
Confidence 578999999999999999999999 9999999999999999876666889999888888999999999999999999998
Q ss_pred ccCC--CcccccccccCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcceecccCCCCCcCCChh
Q 014483 80 HKRG--EKIVHPNDHVNRSQSSNDTFPTVMHIAAAMETNSRLIPNLKVLHNSLHSKSVEFKDIVKIGRTHTQDATPLTLG 157 (423)
Q Consensus 80 ~~~g--~~~~h~~~~v~~g~S~nDi~~Ta~~l~~~~~~~~~l~~~l~~l~~~L~~~A~~~~~~~m~grTh~Q~A~P~T~G 157 (423)
++.| .| +|+++|||+|+||||+++|+++|++++..+..+.+.|..|+++|.++|++|+||+||||||+|||||||||
T Consensus 117 ~~~g~~~~-vH~~d~vn~G~S~nDiv~Ta~~L~lr~~l~~~l~~~l~~l~~~L~~~A~~~~dt~m~GrTH~Q~A~P~TfG 195 (458)
T TIGR00979 117 GKLGSKQP-VHPNDHVNKSQSSNDTFPTAMHIAAVLAIKNQLIPALENLKKTLDAKSKEFAHIVKIGRTHLQDATPLTLG 195 (458)
T ss_pred cccCCCce-eCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCeeecccccccceeeeHH
Confidence 6664 45 99999999999999999999999986653269999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhhcccccccccCCCCCCCcchHHHHHHHHHHcCCCCCcCCchhHHhhhchHHHHHH
Q 014483 158 QEFSGYTTQVKYGIDRVICCLPRMYQLAQGGTAVGTGLNTKKGFDVKIASAVAEETSLPFVTAENKFEALAAHDAFVETS 237 (423)
Q Consensus 158 ~~~a~~~~~l~r~~~rL~~~~~r~~~~~lGg~A~Gt~~~~~~~~~~~~~~~la~~LGl~~~~~~n~~da~~~rd~~~e~~ 237 (423)
||+++|+++|.|+++||..++++++.+||||||+||++++++.|+.++++++++.|||+.++++|++|++++||++++++
T Consensus 196 ~~~~~~~~~l~r~~~RL~~~~~~~~~~~lGg~AvGT~~~~~~~~~~~v~~~~a~~LGl~~~~~~n~~~~~~~rD~~~e~~ 275 (458)
T TIGR00979 196 QEFSGYVAQLEHGLERIAYSLPHLYELAIGGTAVGTGLNTHPGFDEKVAEEIAKETGLPFVTAPNKFEALAAHDAIVEAH 275 (458)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCChhcCCccCChhHHHHHHHHHHHHhCCCCeecCcHHHHHcccHHHHHHH
Confidence 99999999999999999999999999999998899999999988899999999999999878899999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCCcceeEecCCCCCCCCCCCCCCChhHHHHHHHHHHHhhhhhHHHhhhhcCccccc
Q 014483 238 GALNTVAASLMKIANDVRLLGSGPRCGLGELILPENEPGSSIMPGKVNPTQCEALTMVCAQVIGNHVAITVGGSNGHFEL 317 (423)
Q Consensus 238 ~~l~~~~~~L~ria~Dl~~~~s~~r~e~gev~~~~~~~gSS~MPqKrNP~~~E~i~~~a~~~~g~~~~~~~~~~~~~~e~ 317 (423)
++++.++++|+|||+||++|+|+||+||||+.+|++++|||||||||||+.+|.++++|+++.|+..+++.....++++.
T Consensus 276 ~~La~la~~L~kia~Dl~llss~~~~e~gev~~p~~~~GSSiMP~K~NP~~~E~i~~~a~~v~g~~~~~~~~~~~~~~~~ 355 (458)
T TIGR00979 276 GALKTLAASLMKIANDIRWLGSGPRCGLGELFIPENEPGSSIMPGKVNPTQCEALTMVCVQVMGNDATIGFAGSQGNFEL 355 (458)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccccCCceeEECCCCCCCCCCCCCCcCCHHHHHHHHHHHHHHhhHHHHHHHHHhccchh
Confidence 99999999999999999999999999999999999899999999999999999999999999999999998888788888
Q ss_pred ccchhhhHhhhhhHHHHHHHHHHHHHHHhhhCceeCHHHHHHHHHhhhhHHHhhcccccHHHHHHHHHHHHHcCCCHHHH
Q 014483 318 NVFKPMIASGLLHSLRLLGDASASFEKNCVRGIQANRERISKLLHESLMLVTSLNPKIGYDNAAAVAKKAHKEGTTLKDA 397 (423)
Q Consensus 318 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~l~v~~~rm~~~l~~~~~~~~~la~~~g~~~a~~~~~~a~~~g~~l~e~ 397 (423)
+.+++.+.|.++++++.+.+++..++..|+++|+||++||++|+..+++++++|++++||++|+++++++.++|.+++|+
T Consensus 356 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~L~v~~erm~~nl~~~~~~~t~La~~lg~~~A~~~~~~a~~~~~~~~e~ 435 (458)
T TIGR00979 356 NVFKPVIIYNFLQSVRLLSDAMESFRDHCVVGIEPNKERIQQLLNNSLMLVTALNPHIGYDNAAKIAKKAHKEGITLKEA 435 (458)
T ss_pred hhcchHHHHHHHHHHHHHHHHHHHHHHHHHccCEECHHHHHHHHHcCccHHHHhhhccCHHHHHHHHHHHHHhCCCHHHH
Confidence 77888888999999999999999998789999999999999999999999999999999999999999999999999999
Q ss_pred HHHcCCCCHHHHhhccCcccccC
Q 014483 398 ALKLGVLNSEEFDNLVVPEKMIG 420 (423)
Q Consensus 398 ~~~~~~l~~~~l~~~~dp~~~~g 420 (423)
+.+.+.++++++++++||++|+|
T Consensus 436 ~~~~~~l~~~el~~~ldp~~~~~ 458 (458)
T TIGR00979 436 ALELGLLSEEEFDEWVVPEQMVG 458 (458)
T ss_pred HHHcCCCCHHHHHHHcCHHHhcC
Confidence 99988999999999999999986
No 4
>PRK00485 fumC fumarate hydratase; Reviewed
Probab=100.00 E-value=3.6e-94 Score=739.05 Aligned_cols=420 Identities=68% Similarity=1.036 Sum_probs=398.5
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHcC-CCHHHHHHHHHHHHHHHccccCCCCcccccccCcccccccchHHHHHHHHHHHhC
Q 014483 1 MPEPIVRAFGILKKCAAKVNMEYG-LDPAIGKAIMQAAQEVAEGKLNDHFPLVVWQTGSGTQSNMNANEVIANRAAEILG 79 (423)
Q Consensus 1 ~~~~~~~~~~~ve~A~a~a~~~~g-ip~~~a~~I~~a~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ie~~l~~~~g 79 (423)
++++++++|++||.|||.+|.+.| ||++++++|.++|+++.++..++.|+.++.+++.++++|+++|++|++++.+..|
T Consensus 40 ~~~~~~~~~l~ve~A~a~al~~~Giip~~~a~~I~~al~~i~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~~~~~~g 119 (464)
T PRK00485 40 MPRELIRALALLKKAAARVNAELGLLDAEKADAIVAAADEVIAGKHDDHFPLDVWQTGSGTQSNMNVNEVIANRASELLG 119 (464)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHhCccccCCCcchhhccccccccccHHHHHHHHHHHhcC
Confidence 478999999999999999999999 9999999999999998765556789999999889999999999999997777667
Q ss_pred ccC--CCcccccccccCCCCChhhHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHhccCcceecccCCCCCcCCCh
Q 014483 80 HKR--GEKIVHPNDHVNRSQSSNDTFPTVMHIAAAMETN-SRLIPNLKVLHNSLHSKSVEFKDIVKIGRTHTQDATPLTL 156 (423)
Q Consensus 80 ~~~--g~~~~h~~~~v~~g~S~nDi~~Ta~~l~~~~~~~-~~l~~~l~~l~~~L~~~A~~~~~~~m~grTh~Q~A~P~T~ 156 (423)
+++ +++ +|++.|||+|+|||||++|+++|++++. + ..+.+.|.+|+++|.++|++|+||+||||||+||||||||
T Consensus 120 ~~~~~~~~-~h~~~~vh~G~SrnD~v~Ta~~L~lr~~-l~~~l~~~l~~l~~~L~~~A~~~~dt~m~GrTH~Q~A~PiTf 197 (464)
T PRK00485 120 GELGSKKP-VHPNDHVNMSQSSNDTFPTAMHIAAVLA-IVERLLPALEHLRDTLAAKAEEFADIVKIGRTHLQDATPLTL 197 (464)
T ss_pred ccccccCc-cCccccCCCCCCchhHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHcCCCeeeeeecCcCceeeeH
Confidence 443 455 9999999999999999999999998665 6 6999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhhhhhhcccccccccCCCCCCCcchHHHHHHHHHHcCCCCCcCCchhHHhhhchHHHHH
Q 014483 157 GQEFSGYTTQVKYGIDRVICCLPRMYQLAQGGTAVGTGLNTKKGFDVKIASAVAEETSLPFVTAENKFEALAAHDAFVET 236 (423)
Q Consensus 157 G~~~a~~~~~l~r~~~rL~~~~~r~~~~~lGg~A~Gt~~~~~~~~~~~~~~~la~~LGl~~~~~~n~~da~~~rd~~~e~ 236 (423)
|||+++|+++|.|+++||.+++++++.+||||||+||++++++.++.++++++|+.|||+.++.+|++|++++||+++|+
T Consensus 198 G~~~~~~~~~l~R~~~RL~~~~~r~~~~pLGg~AvGT~~~~~~~~~~~v~~~~A~~LGl~~~~~~n~~da~~~rD~~~e~ 277 (464)
T PRK00485 198 GQEFSGYAAQLEHGIERIEAALPHLYELALGGTAVGTGLNAHPGFAERVAEELAELTGLPFVTAPNKFEALAAHDALVEA 277 (464)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCccccCCccCChhHHHHHHHHHHHHhCCCCccCcCHHHHHhccHHHHHH
Confidence 99999999999999999999999999999999889999999999899999999999999966899999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCCCcceeEecCCCCCCCCCCCCCCChhHHHHHHHHHHHhhhhhHHHhhhhcCcccc
Q 014483 237 SGALNTVAASLMKIANDVRLLGSGPRCGLGELILPENEPGSSIMPGKVNPTQCEALTMVCAQVIGNHVAITVGGSNGHFE 316 (423)
Q Consensus 237 ~~~l~~~~~~L~ria~Dl~~~~s~~r~e~gev~~~~~~~gSS~MPqKrNP~~~E~i~~~a~~~~g~~~~~~~~~~~~~~e 316 (423)
++++++++++|+|||+||++|+|+||+|||||.+|++++|||||||||||+.+|.++++|+++.|++.+++....++++|
T Consensus 278 ~~~la~la~~L~ria~Dl~l~ss~~~~e~gev~lp~~~~GSSiMPqKrNP~~~E~ir~~a~~v~g~~~~~~~~~~~~~~e 357 (464)
T PRK00485 278 SGALKTLAVSLMKIANDIRWLASGPRCGLGEISLPENEPGSSIMPGKVNPTQCEALTMVCAQVMGNDAAVTFAGSQGNFE 357 (464)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCccCCCceEEcCCCCCCCCCCCCCCCcHHHHHHHHHHHHHhhhHHHHHHHhccCccc
Confidence 99999999999999999999999999999999999988999999999999999999999999999999999778899999
Q ss_pred cccchhhhHhhhhhHHHHHHHHHHHHHHHhhhCceeCHHHHHHHHHhhhhHHHhhcccccHHHHHHHHHHHHHcCCCHHH
Q 014483 317 LNVFKPMIASGLLHSLRLLGDASASFEKNCVRGIQANRERISKLLHESLMLVTSLNPKIGYDNAAAVAKKAHKEGTTLKD 396 (423)
Q Consensus 317 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~l~v~~~rm~~~l~~~~~~~~~la~~~g~~~a~~~~~~a~~~g~~l~e 396 (423)
++...|.+.|.++++++.+.+++..+++.++++|+||++||++|+..+++++++|++++||+.|+++++.+.++|.+|+|
T Consensus 358 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~v~~erm~~~l~~~~~~~t~La~~lg~~~A~~~~~~a~~~g~~l~~ 437 (464)
T PRK00485 358 LNVFKPVIAYNFLQSIRLLADAMRSFADHCVVGIEPNRERIKELLERSLMLVTALNPHIGYDKAAKIAKKAHKEGLTLKE 437 (464)
T ss_pred ccccChHHHHHHHHHHHHHHHHHHHHHHHHHccCEECHHHHHHHHHhCCeeHHHhccccCHHHHHHHHHHHHHcCCCHHH
Confidence 99999888999999999999999999878999999999999999999999999999999999999999999999999999
Q ss_pred HHHHcCCCCHHHHhhccCcccccCCC
Q 014483 397 AALKLGVLNSEEFDNLVVPEKMIGPS 422 (423)
Q Consensus 397 ~~~~~~~l~~~~l~~~~dp~~~~g~~ 422 (423)
++.+.+.++++++++++||.+|+|+.
T Consensus 438 ~~~~~~~l~~~~l~~~ldP~~~~~~~ 463 (464)
T PRK00485 438 AALELGYLTEEEFDRWVDPEKMTGPG 463 (464)
T ss_pred HHHHcCCCCHHHHHHHcCHHHhcCCC
Confidence 99998899999999999999999974
No 5
>PRK13353 aspartate ammonia-lyase; Provisional
Probab=100.00 E-value=2.3e-93 Score=733.23 Aligned_cols=421 Identities=47% Similarity=0.729 Sum_probs=398.9
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHcC-CCHHHHHHHHHHHHHHHccccCCCCcccccccCcccccccchHHHHHHHHHHHhC
Q 014483 1 MPEPIVRAFGILKKCAAKVNMEYG-LDPAIGKAIMQAAQEVAEGKLNDHFPLVVWQTGSGTQSNMNANEVIANRAAEILG 79 (423)
Q Consensus 1 ~~~~~~~~~~~ve~A~a~a~~~~g-ip~~~a~~I~~a~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ie~~l~~~~g 79 (423)
||+++|++|++||.|||.+|.+.| ||++++++|.++|+++.++...+.|+++++++++++++|+++|++|++++.+.+|
T Consensus 41 ~~~~~i~a~~~ve~A~a~~l~~~Glip~~~a~~I~~al~~i~~~~~~d~f~~~~~~~~~~~~~~~n~~~vi~~~l~e~~g 120 (473)
T PRK13353 41 IHPELIRAFAQVKKAAALANADLGLLPRRIAEAIVQACDEILAGKLHDQFIVDPIQGGAGTSTNMNANEVIANRALELLG 120 (473)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHhccccCCCCcchhhccccchhcchhhHHHHHHHHHHhC
Confidence 689999999999999999999999 9999999999999999876555789999999999999999999999999999999
Q ss_pred ccCCCcc-cccccccCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcceecccCCCCCcCCChhH
Q 014483 80 HKRGEKI-VHPNDHVNRSQSSNDTFPTVMHIAAAMETNSRLIPNLKVLHNSLHSKSVEFKDIVKIGRTHTQDATPLTLGQ 158 (423)
Q Consensus 80 ~~~g~~~-~h~~~~v~~g~S~nDi~~Ta~~l~~~~~~~~~l~~~l~~l~~~L~~~A~~~~~~~m~grTh~Q~A~P~T~G~ 158 (423)
++.|+|. +|+++|||+|+||||+++|+++|++++. +..+.+.|..|+++|.++|++|+|++||||||+|+||||||||
T Consensus 121 ~~~g~~~~~hp~d~vH~GrSrnD~v~Ta~~L~~r~~-l~~l~~~L~~l~~~L~~~A~~~~~~im~GrTH~Q~A~P~T~G~ 199 (473)
T PRK13353 121 GEKGDYHYVSPNDHVNMAQSTNDVFPTAIRIAALNL-LEGLLAAMGALQDVFEEKAAEFDHVIKMGRTQLQDAVPITLGQ 199 (473)
T ss_pred ccccCCccCCcccCccCCCChhhHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHhcCCeeeccccCccceeecHHH
Confidence 7778765 9999999999999999999999998765 6799999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhhhcccccccccCCCCCCCcchHHHHHHHHHHcCCCCCcCCchhHHhhhchHHHHHHH
Q 014483 159 EFSGYTTQVKYGIDRVICCLPRMYQLAQGGTAVGTGLNTKKGFDVKIASAVAEETSLPFVTAENKFEALAAHDAFVETSG 238 (423)
Q Consensus 159 ~~a~~~~~l~r~~~rL~~~~~r~~~~~lGg~A~Gt~~~~~~~~~~~~~~~la~~LGl~~~~~~n~~da~~~rd~~~e~~~ 238 (423)
|+++|+++|.|+++||.+++++++.+||||||+||++++++.++.+++++++++|||+.++.+|.+|++++||+++++++
T Consensus 200 ~~~~~~~~l~r~~~rL~~~~~~~~~~pLGg~AvGT~~~~~~~~~~~~~~~la~~LG~~~~~~~n~~~a~~~rD~~~e~~~ 279 (473)
T PRK13353 200 EFSAYARALKRDRKRIQQAREHLYEVNLGGTAVGTGLNADPEYIERVVKHLAAITGLPLVGAEDLVDATQNTDAFVEVSG 279 (473)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhCCCCccccCCccCChhHHHHHHHHHHHHhCCCCccccchHhhhcccHHHHHHHH
Confidence 99999999999999999999999999999998999999999988999999999999997677899999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCcceeEecCCCCCCCCCCCCCCChhHHHHHHHHHHHhhhhhHHHhhhhcCcccccc
Q 014483 239 ALNTVAASLMKIANDVRLLGSGPRCGLGELILPENEPGSSIMPGKVNPTQCEALTMVCAQVIGNHVAITVGGSNGHFELN 318 (423)
Q Consensus 239 ~l~~~~~~L~ria~Dl~~~~s~~r~e~gev~~~~~~~gSS~MPqKrNP~~~E~i~~~a~~~~g~~~~~~~~~~~~~~e~~ 318 (423)
++++++++|+|||+||++|+|+||+|||||.+|+.++|||||||||||+.+|.++++|+++.|+.++++....+.+++.+
T Consensus 280 ~la~la~~l~riA~Dl~llss~pr~e~gev~lp~~~~GSSiMPqKrNP~~~E~ir~~a~~v~g~~~~~~~~~~~~~~~~~ 359 (473)
T PRK13353 280 ALKVCAVNLSKIANDLRLLSSGPRTGLGEINLPAVQPGSSIMPGKVNPVMPEVVNQIAFQVIGNDVTITLAAEAGQLELN 359 (473)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCcCCceEEECCCCCCCCCCCCCCcCChHHHHHHHHHHHHHhHHHHHHHHHHcCChhhh
Confidence 99999999999999999999999999999999998899999999999999999999999999999999877777777777
Q ss_pred cchhhhHhhhhhHHHHHHHHHHHHHHHhhhCceeCHHHHHHHHHhhhhHHHhhcccccHHHHHHHHHHHHHcCCCHHHHH
Q 014483 319 VFKPMIASGLLHSLRLLGDASASFEKNCVRGIQANRERISKLLHESLMLVTSLNPKIGYDNAAAVAKKAHKEGTTLKDAA 398 (423)
Q Consensus 319 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~l~v~~~rm~~~l~~~~~~~~~la~~~g~~~a~~~~~~a~~~g~~l~e~~ 398 (423)
...|.+...++..+..+.+++..++..++++|+||++||++|+..+++++++|++.+||+.+.++++.+.++|+++++++
T Consensus 360 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~vn~erm~~~l~~~~~l~t~La~~Lgh~~v~~~~~~a~~~g~~l~e~~ 439 (473)
T PRK13353 360 VMEPVIAFNLLESISILTNACRAFTDNCVKGIEANEERCKEYVEKSVGIATALNPHIGYEAAARIAKEAIATGRSVRELA 439 (473)
T ss_pred hhhhhHHHHHHHHHHHHHHHHHHHHHHHHccCEECHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHH
Confidence 77777777888888888889999987899999999999999999999999999999999999999999999999999999
Q ss_pred HHcCCCCHHHHhhccCcccccCCC
Q 014483 399 LKLGVLNSEEFDNLVVPEKMIGPS 422 (423)
Q Consensus 399 ~~~~~l~~~~l~~~~dp~~~~g~~ 422 (423)
.+++.++++++++++||.+|++++
T Consensus 440 ~~~~~~~~~el~~~ldp~~~v~~~ 463 (473)
T PRK13353 440 LENGLLSEEELDLILDPFRMTHPG 463 (473)
T ss_pred hhcCCCCHHHHHHHcCHHHhcCCC
Confidence 988889999999999999999853
No 6
>PRK14515 aspartate ammonia-lyase; Provisional
Probab=100.00 E-value=5.9e-93 Score=727.33 Aligned_cols=421 Identities=42% Similarity=0.702 Sum_probs=401.7
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHcC-CCHHHHHHHHHHHHHHHccccCCCCcccccccCcccccccchHHHHHHHHHHHhC
Q 014483 1 MPEPIVRAFGILKKCAAKVNMEYG-LDPAIGKAIMQAAQEVAEGKLNDHFPLVVWQTGSGTQSNMNANEVIANRAAEILG 79 (423)
Q Consensus 1 ~~~~~~~~~~~ve~A~a~a~~~~g-ip~~~a~~I~~a~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ie~~l~~~~g 79 (423)
+|+.+|+++..+++|||.++.+.| |+++.+++|.++|++|.++..++.|++++++++.+|+.|||+|+|||+++.+++|
T Consensus 47 ~~~~~i~~~~~v~~A~a~~l~~~G~l~~~~~~~I~~al~ei~~~~~~~~f~~~~~~~g~~t~~nmnvnevie~~~~~~~G 126 (479)
T PRK14515 47 IHEGLIKAFAIVKKAAALANTDVGRLELNKGGAIAEAAQEILDGKWHDHFIVDPIQGGAGTSMNMNANEVIANRALELLG 126 (479)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHcCcccCCCCCCcccCCCcccccchHHHHHHHHHHHHhC
Confidence 578999999999999999999999 9999999999999999988778899999999999999999999999999999999
Q ss_pred ccCCCcc-cccccccCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcceecccCCCCCcCCChhH
Q 014483 80 HKRGEKI-VHPNDHVNRSQSSNDTFPTVMHIAAAMETNSRLIPNLKVLHNSLHSKSVEFKDIVKIGRTHTQDATPLTLGQ 158 (423)
Q Consensus 80 ~~~g~~~-~h~~~~v~~g~S~nDi~~Ta~~l~~~~~~~~~l~~~l~~l~~~L~~~A~~~~~~~m~grTh~Q~A~P~T~G~ 158 (423)
++.|+|. +||++|||+||||||+++|+++|++++. +..+.+.|..|+++|.++|++|++++||||||+|+||||||||
T Consensus 127 ~~~g~~~~~hpnd~vn~grS~ND~v~Ta~~L~~~~~-l~~l~~~L~~L~~~L~~~A~~~~~~vm~GrTHlQ~A~PiT~G~ 205 (479)
T PRK14515 127 MEKGDYHYISPNSHVNMAQSTNDAFPTAIHIATLNA-LEGLLQTMGYMHDVFELKAEQFDHVIKMGRTHLQDAVPIRLGQ 205 (479)
T ss_pred cccCCccccCccccCCCCCCchhHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHhcCCcccchhccccceeeeHHH
Confidence 7778875 8999999999999999999999998765 6799999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhhhcccccccccCCCCCCCcchHHHHHHHHHHcCCCCCcCCchhHHhhhchHHHHHHH
Q 014483 159 EFSGYTTQVKYGIDRVICCLPRMYQLAQGGTAVGTGLNTKKGFDVKIASAVAEETSLPFVTAENKFEALAAHDAFVETSG 238 (423)
Q Consensus 159 ~~a~~~~~l~r~~~rL~~~~~r~~~~~lGg~A~Gt~~~~~~~~~~~~~~~la~~LGl~~~~~~n~~da~~~rd~~~e~~~ 238 (423)
||++|+++|.|+++||.+++++++.+||||||+||+++++++|..++...+++.+|+..++.+|.+|++++||+++++++
T Consensus 206 ~~~~~a~~l~r~~~RL~~~~~~l~~~pLG~gAvGT~~~~~~~~~~~~l~~la~~~gl~~~~~~n~~da~~~rd~~~e~~~ 285 (479)
T PRK14515 206 EFKAYSRVLERDMKRIQQSRQHLYEVNMGATAVGTGLNADPEYIEAVVKHLAAISELPLVGAEDLVDATQNTDAYTEVSA 285 (479)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccCCCccccCCCCCChhHHHHHHHHHHHHhCCCCCCCcchHHHhcccHHHHHHHH
Confidence 99999999999999999999999999999889999999999999999999999999988777899999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCcceeEecCCCCCCCCCCCCCCChhHHHHHHHHHHHhhhhhHHHhhhhcCcccccc
Q 014483 239 ALNTVAASLMKIANDVRLLGSGPRCGLGELILPENEPGSSIMPGKVNPTQCEALTMVCAQVIGNHVAITVGGSNGHFELN 318 (423)
Q Consensus 239 ~l~~~~~~L~ria~Dl~~~~s~~r~e~gev~~~~~~~gSS~MPqKrNP~~~E~i~~~a~~~~g~~~~~~~~~~~~~~e~~ 318 (423)
++++++++|+|||+||++|+|+||+||||+.+|++++|||||||||||+.+|.++++|+++.|+..+++....+++++++
T Consensus 286 ~l~~la~~L~kiA~Dl~llsS~p~~g~~Ei~lp~~~~GSSiMP~KrNP~~~E~i~~~a~~v~G~~~~~~~~~~~~~le~n 365 (479)
T PRK14515 286 ALKVCMMNMSKIANDLRLMASGPRVGLAEIMLPARQPGSSIMPGKVNPVMPEVINQIAFQVIGNDHTICLASEAGQLELN 365 (479)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCcCCeeEEeCCCCCCCcCCCCcccCchHHHHHHHHHHHHHhHHHHHHHHHhcccHHHH
Confidence 99999999999999999999999999999999998999999999999999999999999999999999887778888988
Q ss_pred cchhhhHhhhhhHHHHHHHHHHHHHHHhhhCceeCHHHHHHHHHhhhhHHHhhcccccHHHHHHHHHHHHHcCCCHHHHH
Q 014483 319 VFKPMIASGLLHSLRLLGDASASFEKNCVRGIQANRERISKLLHESLMLVTSLNPKIGYDNAAAVAKKAHKEGTTLKDAA 398 (423)
Q Consensus 319 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~l~v~~~rm~~~l~~~~~~~~~la~~~g~~~a~~~~~~a~~~g~~l~e~~ 398 (423)
...+.+.+.++.++..+..++..++..|+++|+||++||++|+..+++++++|++++||+.+++++++|.++|++++|++
T Consensus 366 ~~~p~i~~~l~~si~~l~~al~~~~~~~l~gl~vn~erm~~~l~~s~~l~t~La~~iG~~~v~~~a~~A~~~g~~l~e~~ 445 (479)
T PRK14515 366 VMEPVLVFNLLQSISIMNNGFRAFTDNCLKGIEANEDRLKEYVEKSVGIITAVNPHIGYEAAARVAKEAIATGQSVRELC 445 (479)
T ss_pred HhcchhHHHHHHHHHHHHHHHHHHHHHHHccCEECHHHHHHHHHhCccHHHHhcchhcHHHHHHHHHHHHHhCCCHHHHH
Confidence 87677778899999999999988887899999999999999999999999999999999999999999999999999999
Q ss_pred HHcCCCCHHHHhhccCcccccCCC
Q 014483 399 LKLGVLNSEEFDNLVVPEKMIGPS 422 (423)
Q Consensus 399 ~~~~~l~~~~l~~~~dp~~~~g~~ 422 (423)
.+++.++++++++++||.++++++
T Consensus 446 ~~~~~l~~~el~~~ldP~~~~~~~ 469 (479)
T PRK14515 446 VKNGVLSQEDLELILDPFEMTHPG 469 (479)
T ss_pred HhcCCCCHHHHHHhCCHHHcCCCC
Confidence 999999999999999999999864
No 7
>PRK12273 aspA aspartate ammonia-lyase; Provisional
Probab=100.00 E-value=1.1e-91 Score=720.79 Aligned_cols=419 Identities=46% Similarity=0.734 Sum_probs=390.6
Q ss_pred CHHHHHHHHHHHHHHHHHHHHcC-CCHHHHHHHHHHHHHHHccccCCCCcccccccCcccccccchHHHHHHHHHHHhCc
Q 014483 2 PEPIVRAFGILKKCAAKVNMEYG-LDPAIGKAIMQAAQEVAEGKLNDHFPLVVWQTGSGTQSNMNANEVIANRAAEILGH 80 (423)
Q Consensus 2 ~~~~~~~~~~ve~A~a~a~~~~g-ip~~~a~~I~~a~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ie~~l~~~~g~ 80 (423)
+++++++|++||.||+.+|.+.| ||++++++|.++|.++.++...+.|++++++++.+++.|+++|++|+.++.+++|+
T Consensus 44 ~~~~~~~~l~ve~A~a~al~~~Gii~~~~a~~I~~al~~i~~~~~~~~~~~~~~~~~~~e~~~~~v~~~i~~~~~e~~g~ 123 (472)
T PRK12273 44 YPELIRALAMVKKAAALANKELGLLDEEKADAIVAACDEILAGKLHDQFVVDVIQGGAGTSTNMNANEVIANRALELLGH 123 (472)
T ss_pred hHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHhccccCCcccchhhccccchhhhHHHHHHHHHHHHHhCc
Confidence 38999999999999999999999 99999999999999987655556799999999999999999999999877789986
Q ss_pred cCCCcc-cccccccCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcceecccCCCCCcCCChhHH
Q 014483 81 KRGEKI-VHPNDHVNRSQSSNDTFPTVMHIAAAMETNSRLIPNLKVLHNSLHSKSVEFKDIVKIGRTHTQDATPLTLGQE 159 (423)
Q Consensus 81 ~~g~~~-~h~~~~v~~g~S~nDi~~Ta~~l~~~~~~~~~l~~~l~~l~~~L~~~A~~~~~~~m~grTh~Q~A~P~T~G~~ 159 (423)
+.|+|. +|+++|||+|+||||+++|+++|++++. +..+.+.|..|+++|.++|++|+||+||||||+|||||||||||
T Consensus 124 ~~~~~~~vHp~d~v~~GrSrnD~v~Ta~~L~lr~~-l~~l~~~L~~l~~~L~~~A~~~~dt~m~GrTH~Q~AqP~TfG~~ 202 (472)
T PRK12273 124 EKGEYQYVHPNDHVNMSQSTNDAYPTAIRIALLLS-LRKLLDALEQLQEAFEAKAKEFADILKMGRTQLQDAVPMTLGQE 202 (472)
T ss_pred ccCCcceeCCCCCCCCCCCchHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHccCCEEeecccCccceeeeHHHH
Confidence 666542 9999999999999999999999998765 67999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhhhcccccccccCCCCCCCcchHHHHHHHHHHcCCCCCcCCchhHHhhhchHHHHHHHH
Q 014483 160 FSGYTTQVKYGIDRVICCLPRMYQLAQGGTAVGTGLNTKKGFDVKIASAVAEETSLPFVTAENKFEALAAHDAFVETSGA 239 (423)
Q Consensus 160 ~a~~~~~l~r~~~rL~~~~~r~~~~~lGg~A~Gt~~~~~~~~~~~~~~~la~~LGl~~~~~~n~~da~~~rd~~~e~~~~ 239 (423)
+++|+++|.|+++||.+++++++.+||||||+||++++++.++.++++++|+.|||+.++++|++|++++||++++++++
T Consensus 203 ~a~~~~~l~r~~~RL~~~~~~~~~~plGg~AvGT~~~i~~~~~~~v~~~~A~~LGf~~~~~~n~~da~~~rD~~~e~~~~ 282 (472)
T PRK12273 203 FGAYAVALAEDRKRLYRAAELLREVNLGATAIGTGLNAPPGYIELVVEKLAEITGLPLVPAEDLIEATQDTGAFVEVSGA 282 (472)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcCCCccceeCCCCCChhHHHHHHHHHHHHcCCCcccCcCHHHHHhCcHHHHHHHHH
Confidence 99999999999999999999999999999889999999998888999999999999976778999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCCcceeEecCCCCCCCCCCCCCCChhHHHHHHHHHHHhhhhhHHHhhhhcCccccccc
Q 014483 240 LNTVAASLMKIANDVRLLGSGPRCGLGELILPENEPGSSIMPGKVNPTQCEALTMVCAQVIGNHVAITVGGSNGHFELNV 319 (423)
Q Consensus 240 l~~~~~~L~ria~Dl~~~~s~~r~e~gev~~~~~~~gSS~MPqKrNP~~~E~i~~~a~~~~g~~~~~~~~~~~~~~e~~~ 319 (423)
+++++++|+|||+||++|+|+||+|||||.+|++++|||||||||||+.+|.+|++|+++.|++.+++....+.+++.+.
T Consensus 283 la~la~~L~rlA~Di~llss~e~~e~gev~lp~~~~GSSiMPqKrNP~~~E~ir~~a~~v~G~~~~~~~~~~~~~~~~~~ 362 (472)
T PRK12273 283 LKRLAVKLSKICNDLRLLSSGPRAGLNEINLPAVQAGSSIMPGKVNPVIPEVVNQVCFQVIGNDTTVTMAAEAGQLELNV 362 (472)
T ss_pred HHHHHHHHHHHHHHHHHHhcCcccCceEEECCCCCCcCCCCCcccCcHHHHHHHHHHHHHhhhHHHHHHHHHcCCchhhh
Confidence 99999999999999999999999999999999888999999999999999999999999999999998766666776666
Q ss_pred chhhhHhhhhhHHHHHHHHHHHHHHHhhhCceeCHHHHHHHHHhhhhHHHhhcccccHHHHHHHHHHHHHcCCCHHHHHH
Q 014483 320 FKPMIASGLLHSLRLLGDASASFEKNCVRGIQANRERISKLLHESLMLVTSLNPKIGYDNAAAVAKKAHKEGTTLKDAAL 399 (423)
Q Consensus 320 ~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~l~v~~~rm~~~l~~~~~~~~~la~~~g~~~a~~~~~~a~~~g~~l~e~~~ 399 (423)
..|.+...+++++..+..++..+...++++|+||++||++|+..+++++++||+++||+.|+++++.+.++|++|++++.
T Consensus 363 ~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~l~v~~erm~~~l~~~~~~~t~LA~~L~~~~a~~lv~~a~~~g~~l~~~~~ 442 (472)
T PRK12273 363 MEPVIAYNLFESISILTNACRTLREKCIDGITANEERCREYVENSIGIVTALNPYIGYENAAEIAKEALETGKSVRELVL 442 (472)
T ss_pred hhhhhHHHHHHHHHHHHHHHHHHHHHHHccCEECHHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHh
Confidence 67766677888888888888877535999999999999999999999999999999999999999999999999999999
Q ss_pred HcCCCCHHHHhhccCcccccCC
Q 014483 400 KLGVLNSEEFDNLVVPEKMIGP 421 (423)
Q Consensus 400 ~~~~l~~~~l~~~~dp~~~~g~ 421 (423)
+++.++++++++++||++|+++
T Consensus 443 ~~~~l~~~el~~~ldp~~~v~~ 464 (472)
T PRK12273 443 ERGLLTEEELDDILSPENMTHP 464 (472)
T ss_pred hcCCCCHHHHHHHcCHHHhCCC
Confidence 8888999999999999999986
No 8
>cd01357 Aspartase Aspartase. This subgroup contains Escherichia coli aspartase (L-aspartate ammonia-lyase), Bacillus aspartase and related proteins. It is a member of the Lyase class I family, which includes both aspartase (L-aspartate ammonia-lyase) and fumarase class II enzymes. Members of this family for the most part catalyze similar beta-elimination reactions in which a C-N or C-O bond is cleaved with the release of fumarate as one of the products. These proteins are active as tetramers. The four active sites of the homotetrameric enzyme are each formed by residues from three different subunits. Aspartase catalyzes the reversible deamination of aspartic acid.
Probab=100.00 E-value=2.6e-90 Score=707.35 Aligned_cols=413 Identities=47% Similarity=0.748 Sum_probs=385.4
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHcC-CCHHHHHHHHHHHHHHHccccCCCCcccccccCcccccccchHHHHHHHHHHHhC
Q 014483 1 MPEPIVRAFGILKKCAAKVNMEYG-LDPAIGKAIMQAAQEVAEGKLNDHFPLVVWQTGSGTQSNMNANEVIANRAAEILG 79 (423)
Q Consensus 1 ~~~~~~~~~~~ve~A~a~a~~~~g-ip~~~a~~I~~a~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ie~~l~~~~g 79 (423)
+|++++++|++||.|||.+|.+.| ||++++++|.++|.++.++...+.|++++++++.++++|+++|++|+.++++.+|
T Consensus 36 ~d~~~i~~~l~ve~A~a~al~~~Giip~~~a~~I~~al~~i~~~~~~d~~~~~~~~~~~~~~~~~~~~~vi~~~~~e~~g 115 (450)
T cd01357 36 IHPELIRALAMVKKAAALANAELGLLDEEKAEAIVKACDEIIAGKLHDQFVVDVIQGGAGTSTNMNANEVIANRALELLG 115 (450)
T ss_pred cCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHhccccCCCccchhhccccchhhhhHhHHHHHHHHHHhC
Confidence 578999999999999999999999 9999999999999998765554689999999999999999999999988888998
Q ss_pred ccCCCcc-cccccccCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcceecccCCCCCcCCChhH
Q 014483 80 HKRGEKI-VHPNDHVNRSQSSNDTFPTVMHIAAAMETNSRLIPNLKVLHNSLHSKSVEFKDIVKIGRTHTQDATPLTLGQ 158 (423)
Q Consensus 80 ~~~g~~~-~h~~~~v~~g~S~nDi~~Ta~~l~~~~~~~~~l~~~l~~l~~~L~~~A~~~~~~~m~grTh~Q~A~P~T~G~ 158 (423)
++.|+|. +|+++|||+|+||||+++|+++|++++. +..+.+.|..++++|.++|++|+||+||||||+||||||||||
T Consensus 116 ~~~g~~~~~h~~~~vH~GrSrnD~v~Ta~~L~lr~~-l~~l~~~L~~l~~~L~~~A~~~~~t~m~GrTH~Q~A~P~TfG~ 194 (450)
T cd01357 116 HEKGEYQYVHPNDHVNMSQSTNDVYPTALRLALILL-LRKLLDALAALQEAFQAKAREFADVLKMGRTQLQDAVPMTLGQ 194 (450)
T ss_pred ccccCCcccCCcccccCCCChHhHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHccCCEeeccccCcccccchHHh
Confidence 6667754 9999999999999999999999998765 6799999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhhhcccccccccCCCCCCCcchHHHHHHHHHHcCCCCCcCCchhHHhhhchHHHHHHH
Q 014483 159 EFSGYTTQVKYGIDRVICCLPRMYQLAQGGTAVGTGLNTKKGFDVKIASAVAEETSLPFVTAENKFEALAAHDAFVETSG 238 (423)
Q Consensus 159 ~~a~~~~~l~r~~~rL~~~~~r~~~~~lGg~A~Gt~~~~~~~~~~~~~~~la~~LGl~~~~~~n~~da~~~rd~~~e~~~ 238 (423)
|+++|+++|.|+++||..++++++.+||||||+||+++++++++.+++++++++|||+.++.+|++|++++||+++++++
T Consensus 195 ~~~~~~~~l~r~~~rL~~~~~~~~~~pLGg~AvGt~~~~~~~~~~~v~~~~a~~LGl~~~~~~n~~~a~~~rd~~~e~~~ 274 (450)
T cd01357 195 EFGAYATALKRDRARIYKARERLREVNLGGTAIGTGINAPPGYIELVVEKLSEITGLPLKRAENLIDATQNTDAFVEVSG 274 (450)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCceeCCCCCChhHHHHHHHHHHHHhCCCCccCcCHHHHHhccHHHHHHHH
Confidence 99999999999999999999999999999988999999999888999999999999997567899999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCcceeEecCCCCCCCCCCCCCCChhHHHHHHHHHHHhhhhhHHHhhhhcCcccccc
Q 014483 239 ALNTVAASLMKIANDVRLLGSGPRCGLGELILPENEPGSSIMPGKVNPTQCEALTMVCAQVIGNHVAITVGGSNGHFELN 318 (423)
Q Consensus 239 ~l~~~~~~L~ria~Dl~~~~s~~r~e~gev~~~~~~~gSS~MPqKrNP~~~E~i~~~a~~~~g~~~~~~~~~~~~~~e~~ 318 (423)
++++++++|+|||+|+++|+|+||+|||||.+|++++|||||||||||+.+|.++++|+++.|+..+++....+.+++.+
T Consensus 275 ~l~~~a~~L~riA~Di~l~ss~e~~~~gev~~p~~~~GSSiMPqKrNP~~~E~ir~~a~~v~g~~~~~~~~~~~~~~~~~ 354 (450)
T cd01357 275 ALKRLAVKLSKIANDLRLLSSGPRAGLGEINLPAVQPGSSIMPGKVNPVIPEVVNQVAFQVIGNDLTITMAAEAGQLELN 354 (450)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCcCCceeEECCCCCCcCCCCCCCcCcHHHHHHHHHHHHHhhHHHHHHHHHhcCcchhh
Confidence 99999999999999999999999999999999987899999999999999999999999999999888665566677777
Q ss_pred cchhhhHhhhhhHHHHHHHHHHHHHHHhhhCceeCHHHHHHHHHhhhhHHHhhcccccHHHHHHHHHHHHHcCCCHHHHH
Q 014483 319 VFKPMIASGLLHSLRLLGDASASFEKNCVRGIQANRERISKLLHESLMLVTSLNPKIGYDNAAAVAKKAHKEGTTLKDAA 398 (423)
Q Consensus 319 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~l~v~~~rm~~~l~~~~~~~~~la~~~g~~~a~~~~~~a~~~g~~l~e~~ 398 (423)
...|.+...++.+++.+.+++..+...++++|+||++||++|+..+++++++|++++||+.|+++++.+.++|+++++++
T Consensus 355 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~l~v~~erm~~~l~~~~~~~t~La~~lg~~~a~~~~~~a~~~g~~l~e~~ 434 (450)
T cd01357 355 VFEPVIAYNLLESIDILTNAVRTLRERCIDGITANEERCREYVENSIGIVTALNPYIGYEAAAEIAKEALETGRSVRELV 434 (450)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHHccCEECHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHH
Confidence 67777677788888888888888745899999999999999999999999999999999999999999999999999999
Q ss_pred HHcCCCCHHHHhhccC
Q 014483 399 LKLGVLNSEEFDNLVV 414 (423)
Q Consensus 399 ~~~~~l~~~~l~~~~d 414 (423)
.+++.++++|+++++|
T Consensus 435 ~~~~~l~~~el~~~~~ 450 (450)
T cd01357 435 LEEGLLTEEELDEILS 450 (450)
T ss_pred HhcCCCCHHHHHHHhC
Confidence 9999999999999987
No 9
>TIGR00839 aspA aspartate ammonia-lyase. Fumarate hydratase scores as high as 570 bits against this model.
Probab=100.00 E-value=3.4e-90 Score=706.72 Aligned_cols=420 Identities=41% Similarity=0.662 Sum_probs=391.3
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHcC-CCHHHHHHHHHHHHHHHc-cccCCCCcccccccCcccccccchHHHHHHHHHHHh
Q 014483 1 MPEPIVRAFGILKKCAAKVNMEYG-LDPAIGKAIMQAAQEVAE-GKLNDHFPLVVWQTGSGTQSNMNANEVIANRAAEIL 78 (423)
Q Consensus 1 ~~~~~~~~~~~ve~A~a~a~~~~g-ip~~~a~~I~~a~~~i~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ie~~l~~~~ 78 (423)
++++++++|++||.||+++|++.| ||++++++|.++|+++.+ +..++.+++++..++.++++|+++|++|+..+++.+
T Consensus 38 ~~~~~i~~~l~ve~A~a~al~e~GiIp~~~a~~I~~al~~~~d~~~~~~~~~l~~~~~~~g~~~~~~v~~vie~~l~e~~ 117 (468)
T TIGR00839 38 DIPEFVRGMVMVKKAAALANKELGTIPESIANAIVAACDEILNNGKCHDQFPVDVYQGGAGTSVNMNTNEVIANLALELM 117 (468)
T ss_pred chHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHhcccccccccccHHHccCccccccchHHHHHHHHHHHh
Confidence 459999999999999999999999 999999999999998765 344457889999888899999999999999999999
Q ss_pred CccCCCccc--ccccccCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcceecccCCCCCcCCCh
Q 014483 79 GHKRGEKIV--HPNDHVNRSQSSNDTFPTVMHIAAAMETNSRLIPNLKVLHNSLHSKSVEFKDIVKIGRTHTQDATPLTL 156 (423)
Q Consensus 79 g~~~g~~~~--h~~~~v~~g~S~nDi~~Ta~~l~~~~~~~~~l~~~l~~l~~~L~~~A~~~~~~~m~grTh~Q~A~P~T~ 156 (423)
|.+.|+| + ||++|||+|+||||+++|+++|++++ .+..+.+.|..|+++|.++|++|+||+||||||+||||||||
T Consensus 118 g~~~g~~-~H~~p~~~v~~G~S~nD~v~Ta~~L~lr~-~l~~l~~~l~~l~~~L~~~A~~~~~t~m~grTH~Q~A~P~Tf 195 (468)
T TIGR00839 118 GHQKGEY-QYLNPNDHVNKSQSTNDAYPTGFRIAVYS-SLIKLVDAINQLRDGFEQKAKEFADILKMGRTQLQDAVPMTL 195 (468)
T ss_pred CccccCe-eecCCCCCCCCCCChhhHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHccCCeeeccccCccCccchH
Confidence 9778898 6 47899999999999999999998865 567999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhhhhhhcccccccccCCCCCCCcchHHHHHHHHHHcCCCCCcCCchhHHhhhchHHHHH
Q 014483 157 GQEFSGYTTQVKYGIDRVICCLPRMYQLAQGGTAVGTGLNTKKGFDVKIASAVAEETSLPFVTAENKFEALAAHDAFVET 236 (423)
Q Consensus 157 G~~~a~~~~~l~r~~~rL~~~~~r~~~~~lGg~A~Gt~~~~~~~~~~~~~~~la~~LGl~~~~~~n~~da~~~rd~~~e~ 236 (423)
|||+++|+++|.|+++||.+++++++.+||||||+||++++++.++.+|++++++.|||+.++.+|++|++++||+++++
T Consensus 196 G~~~~~~~~~l~r~~~RL~~~~~~~~~~~lGg~AvGT~~~~~~~~~~~v~~~~a~~LGl~~~~~~n~~da~~~rd~~~e~ 275 (468)
T TIGR00839 196 GQEFEAFSILLEEEVKNIKRTAELLLEVNLGATAIGTGLNTPPEYSPLVVKKLAEVTGLPCVPAENLIEATSDCGAYVMV 275 (468)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCcceeCCCcCChhHHHHHHHHHHHHhCCCCCCCccHHHHhcccHHHHHH
Confidence 99999999999999999999999999999999889999999998889999999999999986678999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCCCcceeEecCCCCCCCCCCCCCCChhHHHHHHHHHHHhhhhhHHHhhhhcCcccc
Q 014483 237 SGALNTVAASLMKIANDVRLLGSGPRCGLGELILPENEPGSSIMPGKVNPTQCEALTMVCAQVIGNHVAITVGGSNGHFE 316 (423)
Q Consensus 237 ~~~l~~~~~~L~ria~Dl~~~~s~~r~e~gev~~~~~~~gSS~MPqKrNP~~~E~i~~~a~~~~g~~~~~~~~~~~~~~e 316 (423)
++++++++++|+|||+|+++|+|+|++|||||.+|.+++|||||||||||+.+|.++++++++.|++.+++....+.+++
T Consensus 276 ~~~l~~la~~L~ria~Dl~l~~s~~~~~~~ev~~~~~~~gSS~MPqKrNP~~~E~ir~~a~~~~g~~~~~~~~~~~~~~~ 355 (468)
T TIGR00839 276 HGALKRLAVKMSKICNDLRLLSSGPRAGLNEINLPELQAGSSIMPAKVNPVVPEVVNQVCFKVIGNDTTVTLAAEAGQLQ 355 (468)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCcCCceEEeCCCCCCCCCCCCCCcCcHHHHHHHHHHHHHHhHHHHHHHHHhcCChH
Confidence 99999999999999999999999999999999999778999999999999999999999999999999886655667777
Q ss_pred cccchhhhHhhhhhHHHHHHHHHHHHHHHhhhCceeCHHHHHHHHHhhhhHHHhhcccccHHHHHHHHHHHHHcCCCHHH
Q 014483 317 LNVFKPMIASGLLHSLRLLGDASASFEKNCVRGIQANRERISKLLHESLMLVTSLNPKIGYDNAAAVAKKAHKEGTTLKD 396 (423)
Q Consensus 317 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~l~v~~~rm~~~l~~~~~~~~~la~~~g~~~a~~~~~~a~~~g~~l~e 396 (423)
.+..+|.+...++++++.+.+++...+..++++|+||++||++|+..+.+++++|++.+||+.|+++++.+.++|+++++
T Consensus 356 ~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~vn~erm~~~l~~~~~~~~~La~~~g~~~a~~~~~~a~~~g~~l~e 435 (468)
T TIGR00839 356 LNVMEPVIGQAMFESIHILTNACYNLTDKCVNGITANKEICEGYVFNSIGIVTYLNPFIGHHNGDIVGKICAETGKSVRE 435 (468)
T ss_pred hhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHccCEECHHHHHHHHHHhHHHHHHHhhHhhHHHHHHHHHHHHHhCCCHHH
Confidence 66667766677888889999999987778999999999999999999999999999999999999999999999999999
Q ss_pred HHHHcCCCCHHHHhhccCcccccCCC
Q 014483 397 AALKLGVLNSEEFDNLVVPEKMIGPS 422 (423)
Q Consensus 397 ~~~~~~~l~~~~l~~~~dp~~~~g~~ 422 (423)
++.+++.+++++++.++||++|++++
T Consensus 436 ~~~~~~~l~~~~l~~~ldP~~~v~~~ 461 (468)
T TIGR00839 436 VVLEKGLLTEEELDDIFSVENLMHPA 461 (468)
T ss_pred HHHhcCCCCHHHHHHHcCHHHHcCCC
Confidence 99988999999999999999999863
No 10
>cd01362 Fumarase_classII Class II fumarases. This subgroup contains Escherichia coli fumarase C, human mitochondrial fumarase, and related proteins. It is a member of the Lyase class I family. Members of this family for the most part catalyze similar beta-elimination reactions in which a C-N or C-O bond is cleaved with the release of fumarate as one of the products. These proteins are active as tetramers. The four active sites of the homotetrameric enzyme are each formed by residues from three different subunits. Fumarase catalyzes the reversible hydration/dehydration of fumarate to L-malate during the Krebs cycle.
Probab=100.00 E-value=3e-89 Score=699.75 Aligned_cols=417 Identities=71% Similarity=1.052 Sum_probs=389.6
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHcC-CCHHHHHHHHHHHHHHHccccCCCCcccccccCcccccccchHHHHHHHHHHHhC
Q 014483 1 MPEPIVRAFGILKKCAAKVNMEYG-LDPAIGKAIMQAAQEVAEGKLNDHFPLVVWQTGSGTQSNMNANEVIANRAAEILG 79 (423)
Q Consensus 1 ~~~~~~~~~~~ve~A~a~a~~~~g-ip~~~a~~I~~a~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ie~~l~~~~g 79 (423)
++++++++|++||.||+++|++.| ||++++++|.++|+++.+...++.|+.++.+++..+++|+++|++|++..++..|
T Consensus 36 ~~~~~i~~~l~ve~A~a~al~~~GiIp~~~a~~I~~al~~i~~~~~~~~~~~~~~~~~~~~~~~~~v~~~i~~~~~~~~g 115 (455)
T cd01362 36 MPRELIRALGLLKKAAAQANAELGLLDEEKADAIVQAADEVIAGKLDDHFPLVVWQTGSGTQTNMNVNEVIANRAIELLG 115 (455)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHhcccccCCceehhhccccccccccHHHHHHHHHHHhcC
Confidence 478999999999999999999999 9999999999999998765456788999988889999999999999977777778
Q ss_pred ccCCCcc-cccccccCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcceecccCCCCCcCCChhH
Q 014483 80 HKRGEKI-VHPNDHVNRSQSSNDTFPTVMHIAAAMETNSRLIPNLKVLHNSLHSKSVEFKDIVKIGRTHTQDATPLTLGQ 158 (423)
Q Consensus 80 ~~~g~~~-~h~~~~v~~g~S~nDi~~Ta~~l~~~~~~~~~l~~~l~~l~~~L~~~A~~~~~~~m~grTh~Q~A~P~T~G~ 158 (423)
++.|+|. +|++.|||+|+|||||++|+++|++++.+++.+.+.|..|+++|.++|++|+||+||||||+||||||||||
T Consensus 116 ~~~g~~~~~~~~~~vH~G~SrnDiv~Ta~~L~lr~~l~~~l~~~l~~l~~~L~~~A~~~~~t~m~grTh~Q~A~P~TfG~ 195 (455)
T cd01362 116 GVLGSKKPVHPNDHVNMSQSSNDTFPTAMHIAAALALQERLLPALKHLIDALDAKADEFKDIVKIGRTHLQDATPLTLGQ 195 (455)
T ss_pred cccCCcCcCCccccccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCeeeccccCCCCeeecHHH
Confidence 7777764 799999999999999999999998877654569999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhhhcccccccccCCCCCCCcchHHHHHHHHHHcCCCCCcCCchhHHhhhchHHHHHHH
Q 014483 159 EFSGYTTQVKYGIDRVICCLPRMYQLAQGGTAVGTGLNTKKGFDVKIASAVAEETSLPFVTAENKFEALAAHDAFVETSG 238 (423)
Q Consensus 159 ~~a~~~~~l~r~~~rL~~~~~r~~~~~lGg~A~Gt~~~~~~~~~~~~~~~la~~LGl~~~~~~n~~da~~~rd~~~e~~~ 238 (423)
|+++|+++|.|+++||..++++++.+||||||+||++++++.++.++++++|+.|||+.++++|++|++++||+++++++
T Consensus 196 ~~~~~~~~l~r~~~rL~~~~~r~~~~~lGg~A~Gt~~~~~~~~~~~v~~~~a~~LGl~~~~~~n~~da~~~rD~~~e~~~ 275 (455)
T cd01362 196 EFSGYAAQLEHAIARIEAALPRLYELALGGTAVGTGLNAHPGFAEKVAAELAELTGLPFVTAPNKFEALAAHDALVEASG 275 (455)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhcCcCCeeccCCccCChhHHHHHHHHHHHHhCCCCccCCCHHHHHhCCHHHHHHHH
Confidence 99999999999999999999999999999988999999999888999999999999997678999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCcceeEecCCCCCCCCCCCCCCChhHHHHHHHHHHHhhhhhHHHhhhhcCcccccc
Q 014483 239 ALNTVAASLMKIANDVRLLGSGPRCGLGELILPENEPGSSIMPGKVNPTQCEALTMVCAQVIGNHVAITVGGSNGHFELN 318 (423)
Q Consensus 239 ~l~~~~~~L~ria~Dl~~~~s~~r~e~gev~~~~~~~gSS~MPqKrNP~~~E~i~~~a~~~~g~~~~~~~~~~~~~~e~~ 318 (423)
+++.++++|+|||+|+++|+|+||+|||||.+|++++|||||||||||+.+|+++++++++.|.+.+++.....++++.+
T Consensus 276 ~l~~la~~l~ria~Dl~~~~s~~~~e~gev~~~~~~~GSS~MPqKrNP~~~E~ir~~a~~~~g~~~~~~~~~~~~~~~~~ 355 (455)
T cd01362 276 ALKTLAVSLMKIANDIRWLGSGPRCGLGELSLPENEPGSSIMPGKVNPTQCEALTMVAAQVMGNDAAITIAGSSGNFELN 355 (455)
T ss_pred HHHHHHHHHHHHHHHHHHHccCccCCCceEECCCCCCCCCCCCCCCCcHHHHHHHHHHHHHhhhHHHHHHHHhcCchhhh
Confidence 99999999999999999999999999999999988899999999999999999999999999999999987777777765
Q ss_pred cchhhhHhhhhhHHHHHHHHHHHHHHHhhhCceeCHHHHHHHHHhhhhHHHhhcccccHHHHHHHHHHHHHcCCCHHHHH
Q 014483 319 VFKPMIASGLLHSLRLLGDASASFEKNCVRGIQANRERISKLLHESLMLVTSLNPKIGYDNAAAVAKKAHKEGTTLKDAA 398 (423)
Q Consensus 319 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~l~v~~~rm~~~l~~~~~~~~~la~~~g~~~a~~~~~~a~~~g~~l~e~~ 398 (423)
...+...|.++++++.+.+++..++..++++|+||++||++|+..+++++++|++.+||++|+++++.+.++|.+|++++
T Consensus 356 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~L~v~~~rm~~~l~~~~~~~~~La~~ig~~~A~~l~~~a~~~~~~l~~~~ 435 (455)
T cd01362 356 VFKPVIIYNLLQSIRLLADACRSFADKCVAGIEPNRERIAELLERSLMLVTALNPHIGYDKAAKIAKKAHKEGLTLKEAA 435 (455)
T ss_pred hcchHHHHHHHHHHHHHHHHHHHHHHHHHccCEECHHHHHHHHHhcchhHHHhccccCHHHHHHHHHHHHHcCCCHHHHH
Confidence 55555568899999999999999987899999999999999999999999999999999999999999999999999999
Q ss_pred HHcCCCCHHHHhhccCccc
Q 014483 399 LKLGVLNSEEFDNLVVPEK 417 (423)
Q Consensus 399 ~~~~~l~~~~l~~~~dp~~ 417 (423)
.+++.+++++++.++||.+
T Consensus 436 ~~~~~~~~~el~~~~dp~~ 454 (455)
T cd01362 436 LELGYLTEEEFDRLVDPEK 454 (455)
T ss_pred HhcCCCCHHHHHHhcCccc
Confidence 9889999999999999985
No 11
>COG0114 FumC Fumarase [Energy production and conversion]
Probab=100.00 E-value=6.5e-88 Score=646.44 Aligned_cols=422 Identities=69% Similarity=1.039 Sum_probs=414.0
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHcC-CCHHHHHHHHHHHHHHHccccCCCCcccccccCcccccccchHHHHHHHHHHHhC
Q 014483 1 MPEPIVRAFGILKKCAAKVNMEYG-LDPAIGKAIMQAAQEVAEGKLNDHFPLVVWQTGSGTQSNMNANEVIANRAAEILG 79 (423)
Q Consensus 1 ~~~~~~~~~~~ve~A~a~a~~~~g-ip~~~a~~I~~a~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ie~~l~~~~g 79 (423)
||+.+|+++..+++|.|+++.++| +|++.+++|.++|++|.++.++++||++.+|.|++|..|||+||||.++..+.+|
T Consensus 39 mp~~~I~Al~~lKkaaA~~N~~LG~L~~~~a~aI~~Aadev~~Gk~d~~FPl~VwQTGSGTqsNMN~NEVIanrA~e~~g 118 (462)
T COG0114 39 MPREIIRALGLLKKAAAQVNADLGLLDPEKADAIIAAADEVLAGKHDDHFPLDVWQTGSGTQSNMNVNEVIANRASELLG 118 (462)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHcCcccCCCCeEEEecCCCccccccHHHHHHHHHHHHhC
Confidence 789999999999999999999999 9999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCcc-cccccccCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcceecccCCCCCcCCChhH
Q 014483 80 HKRGEKI-VHPNDHVNRSQSSNDTFPTVMHIAAAMETNSRLIPNLKVLHNSLHSKSVEFKDIVKIGRTHTQDATPLTLGQ 158 (423)
Q Consensus 80 ~~~g~~~-~h~~~~v~~g~S~nDi~~Ta~~l~~~~~~~~~l~~~l~~l~~~L~~~A~~~~~~~m~grTh~Q~A~P~T~G~ 158 (423)
.+.|.+. +||++|||+|+||||++.||+++....++..+|++.|..|.++|.+|+++|.+++.+||||+|+|.|+|||+
T Consensus 119 g~~g~~~~VHPNDhVN~sQSSNDtfPTAmhIAa~~~v~~~LiPaL~~L~~~L~~Ka~~~~~iVKiGRTHLqDAtPlTlGQ 198 (462)
T COG0114 119 GELGSKKPVHPNDHVNMSQSSNDTFPTAMHIAAVLAVVNRLIPALKHLIKTLAAKAEEFADVVKIGRTHLQDATPLTLGQ 198 (462)
T ss_pred cccCCCCCCCCCCcCCcccccCcchhhHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHhhhhhcCcccccccCcchhhh
Confidence 8777655 999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhhhcccccccccCCCCCCCcchHHHHHHHHHHcCCCCCcCCchhHHhhhchHHHHHHH
Q 014483 159 EFSGYTTQVKYGIDRVICCLPRMYQLAQGGTAVGTGLNTKKGFDVKIASAVAEETSLPFVTAENKFEALAAHDAFVETSG 238 (423)
Q Consensus 159 ~~a~~~~~l~r~~~rL~~~~~r~~~~~lGg~A~Gt~~~~~~~~~~~~~~~la~~LGl~~~~~~n~~da~~~rd~~~e~~~ 238 (423)
.|++|..+|.+.++|++...+++...++||+|||||.+..++|++.+.+.+++..|+.+.+.+|.+.+.+++|.++++.+
T Consensus 199 E~sGy~~ql~~~~~~i~~~l~~l~eLAiGGTAVGTGlNa~p~f~ekva~~i~~~TG~~F~~a~NkF~al~~hd~lv~~~G 278 (462)
T COG0114 199 EFSGYAAQLEHALERIEASLPHLYELAIGGTAVGTGLNAHPEFGEKVAEELAELTGLPFVTAPNKFEALAAHDALVEASG 278 (462)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHccCCcccccCcCCCccHHHHHHHHHHHHhCCCcccCCcHHHHHhcchHHHHHhH
Confidence 99999999999999999999999999999999999999999999999999999999999889999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCcceeEecCCCCCCCCCCCCCCChhHHHHHHHHHHHhhhhhHHHhhhhcCcccccc
Q 014483 239 ALNTVAASLMKIANDVRLLGSGPRCGLGELILPENEPGSSIMPGKVNPTQCEALTMVCAQVIGNHVAITVGGSNGHFELN 318 (423)
Q Consensus 239 ~l~~~~~~L~ria~Dl~~~~s~~r~e~gev~~~~~~~gSS~MPqKrNP~~~E~i~~~a~~~~g~~~~~~~~~~~~~~e~~ 318 (423)
.|..+++.|-|||+||+++.||||+++||+.+|+.++||||||.|+||+.||.+...|.+|+|+.+++..+.++++||+|
T Consensus 279 al~~lA~~L~KIAnDiR~l~SGPr~GLgEi~lPenePGSSIMPGKVNPtq~EA~tmv~~QV~Gnd~ai~~ags~GnFELN 358 (462)
T COG0114 279 ALRTLAVSLMKIANDIRWLGSGPRCGLGEIELPENEPGSSIMPGKVNPTQCEALTMVAAQVIGNDAAIAFAGSQGNFELN 358 (462)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCCccccccCCCCCCccCCCCCCCchhHHHHHHHHHHHHcchHHHHHhhccCceeec
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cchhhhHhhhhhHHHHHHHHHHHHHHHhhhCceeCHHHHHHHHHhhhhHHHhhcccccHHHHHHHHHHHHHcCCCHHHHH
Q 014483 319 VFKPMIASGLLHSLRLLGDASASFEKNCVRGIQANRERISKLLHESLMLVTSLNPKIGYDNAAAVAKKAHKEGTTLKDAA 398 (423)
Q Consensus 319 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~l~v~~~rm~~~l~~~~~~~~~la~~~g~~~a~~~~~~a~~~g~~l~e~~ 398 (423)
.+.|++.|++++++.++.+++..+.+.|+.+|++|+++|+++++.+.+++|.|++.+||+.|.++++.|.++|++++|++
T Consensus 359 v~~Pvi~~N~LqS~~LLada~~~f~~~ci~gie~n~~~i~~~l~~SlmLVTaLnp~IGYdkAa~IAK~A~keg~tlreaa 438 (462)
T COG0114 359 VFKPVIAYNFLQSVRLLADAMRSFADHCIVGIEPNEERIKELLERSLMLVTALNPHIGYDKAAKIAKKAHKEGTTLREAA 438 (462)
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHHHhhccccCHHHHHHHHhhCchHHHhcccccchHHHHHHHHHHHHCCCcHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHcCCCCHHHHhhccCcccccCCC
Q 014483 399 LKLGVLNSEEFDNLVVPEKMIGPS 422 (423)
Q Consensus 399 ~~~~~l~~~~l~~~~dp~~~~g~~ 422 (423)
.+.++++++|+++++||+..+++.
T Consensus 439 ~~~G~lte~efd~~v~Pe~mv~~~ 462 (462)
T COG0114 439 LELGLLSEEEFDKLVDPEKMVGPG 462 (462)
T ss_pred HHcCCCCHHHHHHhcCHHHhcCCC
Confidence 999999999999999999999864
No 12
>cd01596 Aspartase_like aspartase (L-aspartate ammonia-lyase) and fumarase class II enzymes. This group contains aspartase (L-aspartate ammonia-lyase), fumarase class II enzymes, and related proteins. It is a member of the Lyase class I family. Members of this family for the most part catalyze similar beta-elimination reactions in which a C-N or C-O bond is cleaved with the release of fumarate as one of the products. These proteins are active as tetramers. The four active sites of the homotetrameric enzyme are each formed by residues from three different subunits. Aspartase catalyzes the reversible deamination of aspartic acid. Fumarase catalyzes the reversible hydration/dehydration of fumarate to L-malate during the Krebs cycle.
Probab=100.00 E-value=1.9e-87 Score=684.96 Aligned_cols=413 Identities=59% Similarity=0.884 Sum_probs=386.8
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHcC-CCHHHHHHHHHHHHHHHccccCCCCcccccccCcccccccchHHHHHHHHHHHhC
Q 014483 1 MPEPIVRAFGILKKCAAKVNMEYG-LDPAIGKAIMQAAQEVAEGKLNDHFPLVVWQTGSGTQSNMNANEVIANRAAEILG 79 (423)
Q Consensus 1 ~~~~~~~~~~~ve~A~a~a~~~~g-ip~~~a~~I~~a~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ie~~l~~~~g 79 (423)
++++++++|++||.||+++|.+.| ||++++++|.++|+++.++..++.|+.++.+++..+++|+++|++|+.++.+.+|
T Consensus 36 ~~~~~i~~~l~ve~A~a~al~~~Giip~~~a~~I~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~v~~~i~~~~~~~~g 115 (450)
T cd01596 36 MPPELIRALALVKKAAALANAELGLLDEEKADAIVQACDEVIAGKLDDQFPLDVWQTGSGTSTNMNVNEVIANRALELLG 115 (450)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHcCcccCCCcccHHhccCcccccchHHHHHHHHHHHHhc
Confidence 478999999999999999999999 9999999999999999765556778888888888899999999999877768888
Q ss_pred ccCCCccccccccc-CCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcceecccCCCCCcCCChhH
Q 014483 80 HKRGEKIVHPNDHV-NRSQSSNDTFPTVMHIAAAMETNSRLIPNLKVLHNSLHSKSVEFKDIVKIGRTHTQDATPLTLGQ 158 (423)
Q Consensus 80 ~~~g~~~~h~~~~v-~~g~S~nDi~~Ta~~l~~~~~~~~~l~~~l~~l~~~L~~~A~~~~~~~m~grTh~Q~A~P~T~G~ 158 (423)
+..|+|.+|+++|| |+|+|||||++|+++|++++ .+..+.+.|.+|+++|.++|++|+|++||||||+|+||||||||
T Consensus 116 ~~~g~~~~h~~~~v~h~g~SrnD~v~t~~~L~lr~-~l~~l~~~l~~l~~~L~~lA~~~~~t~m~grTH~Q~A~P~T~G~ 194 (450)
T cd01596 116 GKKGKYPVHPNDDVNNSQSSNDDFPPAAHIAAALA-LLERLLPALEQLQDALDAKAEEFADIVKIGRTHLQDAVPLTLGQ 194 (450)
T ss_pred cccCCcccCCCcccCCCCCCchHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhcCCeeeccccccCCeeehHHH
Confidence 55566547988888 79999999999999998865 56899999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhhhcccccccccCCCCCCCcchHHHHHHHHHHcCCCCCcCCchhHHhhhchHHHHHHH
Q 014483 159 EFSGYTTQVKYGIDRVICCLPRMYQLAQGGTAVGTGLNTKKGFDVKIASAVAEETSLPFVTAENKFEALAAHDAFVETSG 238 (423)
Q Consensus 159 ~~a~~~~~l~r~~~rL~~~~~r~~~~~lGg~A~Gt~~~~~~~~~~~~~~~la~~LGl~~~~~~n~~da~~~rd~~~e~~~ 238 (423)
|+++|+++|.|+++||..++++++.+||||||+||++++++.++.++++++|+.|||+.++.+|++||+++||+++++++
T Consensus 195 ~~~~~~~~l~r~~~rL~~~~~~~~~~plGg~A~Gt~~~~~~~~~~~v~~~~a~~LGl~~~~~~n~~d~~~~rd~~~e~~~ 274 (450)
T cd01596 195 EFSGYAAQLARDIARIEAALERLRELNLGGTAVGTGLNAPPGYAEKVAAELAELTGLPFVTAPNLFEATAAHDALVEVSG 274 (450)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcceeCCCCCChhHHHHHHHHHHHHhCCCCccCcCHHHHHhcchHHHHHHH
Confidence 99999999999999999999999999999988999999999888999999999999997678999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCcceeEecCCCCCCCCCCCCCCChhHHHHHHHHHHHhhhhhHHHhhhhcCcccccc
Q 014483 239 ALNTVAASLMKIANDVRLLGSGPRCGLGELILPENEPGSSIMPGKVNPTQCEALTMVCAQVIGNHVAITVGGSNGHFELN 318 (423)
Q Consensus 239 ~l~~~~~~L~ria~Dl~~~~s~~r~e~gev~~~~~~~gSS~MPqKrNP~~~E~i~~~a~~~~g~~~~~~~~~~~~~~e~~ 318 (423)
++++++++|+|||+|+++|+|+||+|||||.+|++++|||+|||||||+.+|+++++++++.|.+.+++....+.+++++
T Consensus 275 ~la~~~~~l~ria~Dl~~~ss~~~~e~gev~~~~~~~GSS~MPqKrNP~~~E~ir~~a~~~~g~~~~~~~~~~~~~~e~~ 354 (450)
T cd01596 275 ALKTLAVSLSKIANDLRLLSSGPRAGLGEINLPANQPGSSIMPGKVNPVIPEAVNMVAAQVIGNDTAITMAGSAGQLELN 354 (450)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCcCCCeeEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHhccHHHHHHHhhcCccccc
Confidence 99999999999999999999988899999999998899999999999999999999999999999999877888899987
Q ss_pred cchhhhHhhhhhHHHHHHHHHHHHHHHhhhCceeCHHHHHHHHHhhhhHHHhhcccccHHHHHHHHHHHHHcCCCHHHHH
Q 014483 319 VFKPMIASGLLHSLRLLGDASASFEKNCVRGIQANRERISKLLHESLMLVTSLNPKIGYDNAAAVAKKAHKEGTTLKDAA 398 (423)
Q Consensus 319 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~l~v~~~rm~~~l~~~~~~~~~la~~~g~~~a~~~~~~a~~~g~~l~e~~ 398 (423)
...|...+.++++++.+.+++..++..++++|+||++||++|+..+++++++||+.+||+.|+++++.+.++|++|++++
T Consensus 355 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~v~~~rm~~~l~~~~~~~t~LA~~lg~~~a~~~v~~a~~~g~~l~~~~ 434 (450)
T cd01596 355 VFKPVIAYNLLQSIRLLANACRSFRDKCVEGIEANEERCKEYVENSLMLVTALNPHIGYEKAAEIAKEALKEGRTLREAA 434 (450)
T ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHHHHccCEECHHHHHHHHHhCcchHHHHhHHHhHHHHHHHHHHHHHcCCCHHHHH
Confidence 77776567799999999999999988899999999999999999999999999999999999999999999999999999
Q ss_pred HHcCCCCHHHHhhccC
Q 014483 399 LKLGVLNSEEFDNLVV 414 (423)
Q Consensus 399 ~~~~~l~~~~l~~~~d 414 (423)
.+++.++++++++++|
T Consensus 435 ~~~~~~~~~~l~~~~d 450 (450)
T cd01596 435 LELGLLTEEELDEILD 450 (450)
T ss_pred HHhCCCCHHHHHHHhC
Confidence 9889999999999887
No 13
>COG1027 AspA Aspartate ammonia-lyase [Amino acid transport and metabolism]
Probab=100.00 E-value=2.9e-85 Score=626.18 Aligned_cols=419 Identities=46% Similarity=0.740 Sum_probs=409.9
Q ss_pred CHHHHHHHHHHHHHHHHHHHHcC-CCHHHHHHHHHHHHHHHccccCCCCcccccccCcccccccchHHHHHHHHHHHhCc
Q 014483 2 PEPIVRAFGILKKCAAKVNMEYG-LDPAIGKAIMQAAQEVAEGKLNDHFPLVVWQTGSGTQSNMNANEVIANRAAEILGH 80 (423)
Q Consensus 2 ~~~~~~~~~~ve~A~a~a~~~~g-ip~~~a~~I~~a~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ie~~l~~~~g~ 80 (423)
.|.|++++..|++|.|.++.|+| ||++.+++|.+||++|.++...++|++|.+|+|.+|+.|||.||||+|+..|.+|.
T Consensus 43 ~p~~i~a~~~VKKAaAlaN~elg~l~~~~~~aIv~ACDeil~Gk~~dqFvvD~~QGGAGTS~NMN~NEVIAN~AlE~lG~ 122 (471)
T COG1027 43 VPEFIRAMAMVKKAAALANKELGALPKEIADAIVKACDEILDGKCHDQFVVDVYQGGAGTSTNMNANEVIANRALELLGH 122 (471)
T ss_pred cHHHHHHHHHHHHHHHHhhhhhCCCCHHHHHHHHHHHHHHHcCccccccceeccccCCCccccccHHHHHHHHHHHHhcC
Confidence 38999999999999999999999 99999999999999999998999999999999999999999999999999999999
Q ss_pred cCCCcc-cccccccCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcceecccCCCCCcCCChhHH
Q 014483 81 KRGEKI-VHPNDHVNRSQSSNDTFPTVMHIAAAMETNSRLIPNLKVLHNSLHSKSVEFKDIVKIGRTHTQDATPLTLGQE 159 (423)
Q Consensus 81 ~~g~~~-~h~~~~v~~g~S~nDi~~Ta~~l~~~~~~~~~l~~~l~~l~~~L~~~A~~~~~~~m~grTh~Q~A~P~T~G~~ 159 (423)
++|.|. +||++|||+++|+||..+|++|+.+... +..+.+.+..|++++..|+++|+|++++||||+|+|.|+|+|+.
T Consensus 123 ~KGeY~~~hPndhVNmsQSTND~yPTa~ria~~~~-l~~L~~al~~L~~af~~Ka~EF~~ilKmGRTqLQDAvPmtlGqE 201 (471)
T COG1027 123 EKGEYQYLHPNDHVNMSQSTNDAYPTAFRIAVYKS-LRKLIDALEDLIEAFERKAKEFADILKMGRTQLQDAVPMTLGQE 201 (471)
T ss_pred CCCceeeeCCccccchhhcccccchhHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhhhhhcChhhhcccccchhhhh
Confidence 999996 9999999999999999999999999875 57999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhhhcccccccccCCCCCCCcchHHHHHHHHHHcCCCCCcCCchhHHhhhchHHHHHHHH
Q 014483 160 FSGYTTQVKYGIDRVICCLPRMYQLAQGGTAVGTGLNTKKGFDVKIASAVAEETSLPFVTAENKFEALAAHDAFVETSGA 239 (423)
Q Consensus 160 ~a~~~~~l~r~~~rL~~~~~r~~~~~lGg~A~Gt~~~~~~~~~~~~~~~la~~LGl~~~~~~n~~da~~~rd~~~e~~~~ 239 (423)
|.+|+..|.||++||.++.+++..+.+||+|+|||.+.+++|...+.+++++..|++..+..|.++++.+-|.++++.+.
T Consensus 202 F~Afa~~l~ed~~ri~~~~~~l~evNlGgTAiGTGiNa~~~Y~~~vv~~l~evtg~~~~~A~~Lieatq~~~afv~vsg~ 281 (471)
T COG1027 202 FGAFAVALKEDIKRIYRAAELLLEVNLGGTAIGTGINAPKGYIELVVKKLAEVTGLPLVPAENLIEATQDTGAFVMVSGA 281 (471)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcCCceeeccCcCCChhHHHHHHHHHHHHhCCCCccchhHHHHHhcccHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCCcceeEecCCCCCCCCCCCCCCChhHHHHHHHHHHHhhhhhHHHhhhhcCccccccc
Q 014483 240 LNTVAASLMKIANDVRLLGSGPRCGLGELILPENEPGSSIMPGKVNPTQCEALTMVCAQVIGNHVAITVGGSNGHFELNV 319 (423)
Q Consensus 240 l~~~~~~L~ria~Dl~~~~s~~r~e~gev~~~~~~~gSS~MPqKrNP~~~E~i~~~a~~~~g~~~~~~~~~~~~~~e~~~ 319 (423)
|..++..|+|||+|+++++||||++++|+.+|+.|.||||||.|.||+++|.+...|..++|+..++.+++..+++|+|.
T Consensus 282 lk~~Av~LsKI~NDlRLLsSGPr~Gl~EI~LP~~Q~GSSIMPgKVNPVipEvvnQvcf~ViGnD~tit~AaeaGQLqLNv 361 (471)
T COG1027 282 LKRLAVKLSKICNDLRLLSSGPRAGLNEINLPAVQAGSSIMPGKVNPVIPEVVNQVCFKVIGNDTTITMAAEAGQLQLNV 361 (471)
T ss_pred HHHHHHHHHHHhhhhhhhccCCccCcccccCCCCCCCCCCCCCCcCchhHHHHHHHHHHHhcchHHHHHHHHhcchhhhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred chhhhHhhhhhHHHHHHHHHHHHHHHhhhCceeCHHHHHHHHHhhhhHHHhhcccccHHHHHHHHHHHHHcCCCHHHHHH
Q 014483 320 FKPMIASGLLHSLRLLGDASASFEKNCVRGIQANRERISKLLHESLMLVTSLNPKIGYDNAAAVAKKAHKEGTTLKDAAL 399 (423)
Q Consensus 320 ~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~l~v~~~rm~~~l~~~~~~~~~la~~~g~~~a~~~~~~a~~~g~~l~e~~~ 399 (423)
++|++.+.++.++..+..++..+.++|+++++.|+++|++++..+.+++|.|.+.+||+.+.++++.|.+.|++.+|++.
T Consensus 362 mePvI~~~l~~Si~iL~na~~~l~ekcI~gItaN~e~C~~~v~nSigivTaLnp~iGy~~~~~iaK~a~~tgksv~evvL 441 (471)
T COG1027 362 MEPVIAYALFESISILTNACRNLREKCIDGITANEERCEEYVENSIGIVTALNPYIGYENAAIIAKEALETGKSVREVVL 441 (471)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCHHHHHHHHHhhhHHHHhhcccccchHHHHHHHHHHHcCCcHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HcCCCCHHHHhhccCcccccCC
Q 014483 400 KLGVLNSEEFDNLVVPEKMIGP 421 (423)
Q Consensus 400 ~~~~l~~~~l~~~~dp~~~~g~ 421 (423)
+.+.+++++|+.+|+|.+...+
T Consensus 442 e~g~Lteeel~~Il~~~~m~~p 463 (471)
T COG1027 442 ERGLLTEEELDDILSPENMTKP 463 (471)
T ss_pred HhCCCCHHHHHHHhChhhcCCc
Confidence 9999999999999999987654
No 14
>COG0165 ArgH Argininosuccinate lyase [Amino acid transport and metabolism]
Probab=100.00 E-value=1.7e-80 Score=617.34 Aligned_cols=391 Identities=23% Similarity=0.290 Sum_probs=346.0
Q ss_pred CHHHHHHHHHHHHHHHHHHHHcC-CCHHHHHHHHHHHHHHHccccCCCCcccccccCcccccccchHHHHHHHHHHHhCc
Q 014483 2 PEPIVRAFGILKKCAAKVNMEYG-LDPAIGKAIMQAAQEVAEGKLNDHFPLVVWQTGSGTQSNMNANEVIANRAAEILGH 80 (423)
Q Consensus 2 ~~~~~~~~~~ve~A~a~a~~~~g-ip~~~a~~I~~a~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ie~~l~~~~g~ 80 (423)
+..++..-+..-.||+.++.+.| |++++++.|.+++.++.++...+.|.+++- .||+|++ ||+++++++|
T Consensus 28 D~~l~~~di~~s~AH~~mL~~~Gii~~ee~~~I~~~L~~l~~e~~~g~~~~~~~----~EDvH~a----iE~~L~~~iG- 98 (459)
T COG0165 28 DKRLAEYDIAGSIAHAKMLAKQGIITEEEAAKILEGLEELLEEIRAGKFELDPD----DEDVHTA----IEARLIERIG- 98 (459)
T ss_pred HHHHHHHHHHHhHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHhcCCccCCCc----cccHHHH----HHHHHHHHHh-
Confidence 45678888889999999999999 999999999999999997655566777653 4555555 9999999999
Q ss_pred cCCCcccccccccCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcceecccCCCCCcCCChhHHH
Q 014483 81 KRGEKIVHPNDHVNRSQSSNDTFPTVMHIAAAMETNSRLIPNLKVLHNSLHSKSVEFKDIVKIGRTHTQDATPLTLGQEF 160 (423)
Q Consensus 81 ~~g~~~~h~~~~v~~g~S~nDi~~Ta~~l~~~~~~~~~l~~~l~~l~~~L~~~A~~~~~~~m~grTh~Q~A~P~T~G~~~ 160 (423)
+.||| +|+ ||||||+|.|.++||+++++ ..|...+..|+++|+++|++|.+++||||||+|+|||+|||||+
T Consensus 99 ~~ggk-Lht------gRSRNDQVatd~rL~lr~~~-~~l~~~i~~l~~aL~~~Ae~~~~~imPGyTHlQ~AQPvtf~H~l 170 (459)
T COG0165 99 DVGGK-LHT------GRSRNDQVATDLRLWLRDKL-LELLELIRILQKALLDLAEEHAETVMPGYTHLQRAQPVTFAHHL 170 (459)
T ss_pred hhhch-hcc------ccchhHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHccCCccCCcccccccCcCcHHHHH
Confidence 88999 997 99999999999999998875 69999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhhcccccccc-cCCCCCCCcchHHHHHHHHHHcCCCCCcCCchhHHhhhchHHHHHHHH
Q 014483 161 SGYTTQVKYGIDRVICCLPRMYQLAQGGTAV-GTGLNTKKGFDVKIASAVAEETSLPFVTAENKFEALAAHDAFVETSGA 239 (423)
Q Consensus 161 a~~~~~l~r~~~rL~~~~~r~~~~~lGg~A~-Gt~~~~~~~~~~~~~~~la~~LGl~~~~~~n~~da~~~rd~~~e~~~~ 239 (423)
.+|++.|.||++||.++++|++.||||+||. ||++|+||. ++|++|||+. +..|++|++++||+++|++++
T Consensus 171 lay~~~l~RD~~Rl~d~~~rvn~sPLGagAlaGt~~~iDR~-------~tA~lLGF~~-~~~Nsldavs~Rdf~le~l~~ 242 (459)
T COG0165 171 LAYAEMLARDIERLRDALKRVNVSPLGAGALAGTPFPIDRE-------RTAELLGFDA-VTRNSLDAVSDRDFILEFLSA 242 (459)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccCCccccccCCCCCCCCHH-------HHHHHcCCch-hhcCchhhhhhHHHHHHHHHH
Confidence 9999999999999999999999999999997 999999995 7999999997 799999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCCcceeEecCCC-CCCCCCCCCCCChhHHHHHHHHHHHhhhhhHHHhhhhcCcccccc
Q 014483 240 LNTVAASLMKIANDVRLLGSGPRCGLGELILPEN-EPGSSIMPGKVNPTQCEALTMVCAQVIGNHVAITVGGSNGHFELN 318 (423)
Q Consensus 240 l~~~~~~L~ria~Dl~~~~s~~r~e~gev~~~~~-~~gSS~MPqKrNP~~~E~i~~~a~~~~g~~~~~~~~~~~~~~e~~ 318 (423)
+++++.+|||||+|+++|+| .|||+|++|+. ++|||||||||||+.+|++|++++++.|++.+++......++.+|
T Consensus 243 ~s~~~~~LSRlaedlI~wss---~EfgfI~l~D~~sTGSSIMPQKKNPD~~ELiRgk~grv~G~l~~ll~~~k~lPlaYn 319 (459)
T COG0165 243 AALIMVHLSRLAEDLILWSS---PEFGFIELPDEFSTGSSIMPQKKNPDVLELIRGKAGRVIGALTGLLTIMKGLPLAYN 319 (459)
T ss_pred HHHHHHHHHHHHHHHHHHcc---ccCceEeCCcccccccccCCCCCCCcHHHHHHHhhhhhHHHHHHHHHHHhcCccccc
Confidence 99999999999999999998 48999999987 899999999999999999999999999999999887655554433
Q ss_pred cchhhhHhhhhhHHHHHHHHHHHHHHHhhhCceeCHHHHHHHHHhhhhHHHhhccc-----ccHHHHHH----HHHHHHH
Q 014483 319 VFKPMIASGLLHSLRLLGDASASFEKNCVRGIQANRERISKLLHESLMLVTSLNPK-----IGYDNAAA----VAKKAHK 389 (423)
Q Consensus 319 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~l~v~~~rm~~~l~~~~~~~~~la~~-----~g~~~a~~----~~~~a~~ 389 (423)
--.-..-..+++++..+..++..++ .++++|+||+++|++....+++++|++|++ ++|++||+ +|+.+.+
T Consensus 320 rDlQedke~lfds~~t~~~~l~~~~-~mv~~l~vn~e~~~~a~~~gfs~aTdlAd~lv~kGvPFReAh~ivG~~v~~~~~ 398 (459)
T COG0165 320 RDLQEDKEPLFDSVDTLEDSLRVLA-GMVSGLTVNKERMREAAEAGFSTATDLADYLVRKGVPFREAHEIVGEAVRRAEE 398 (459)
T ss_pred HHHHhhhHHHHHHHHHHHHHHHHHH-HHHccCeeCHHHHHHHhhcccchHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHH
Confidence 1111122457889999988888886 799999999999999999999999998875 68999985 6677888
Q ss_pred cCCCHHHHHHHc----CCCCHHHHhhccCcccccCC
Q 014483 390 EGTTLKDAALKL----GVLNSEEFDNLVVPEKMIGP 421 (423)
Q Consensus 390 ~g~~l~e~~~~~----~~l~~~~l~~~~dp~~~~g~ 421 (423)
.|+++.++..++ +.+-++++.++++|+..|..
T Consensus 399 ~~~~l~~l~~~~~~~~~~~~~~dv~~~l~~~~~v~~ 434 (459)
T COG0165 399 RGKDLADLSLEELQSISPLIDEDVYEVLTPEESVAK 434 (459)
T ss_pred cCCCHHhccHHHHhhhccccchHHHHHhchHHHHHH
Confidence 899888876653 34556788889999887653
No 15
>PRK09053 3-carboxy-cis,cis-muconate cycloisomerase; Provisional
Probab=100.00 E-value=9.3e-80 Score=631.96 Aligned_cols=397 Identities=23% Similarity=0.295 Sum_probs=348.6
Q ss_pred CHHHHHHHHHHHHHHHHHHHHcC-CCHHHHHHHHHHHHHHHccccCCCCcccccccCcccccccchHHHHHHHHHHHhCc
Q 014483 2 PEPIVRAFGILKKCAAKVNMEYG-LDPAIGKAIMQAAQEVAEGKLNDHFPLVVWQTGSGTQSNMNANEVIANRAAEILGH 80 (423)
Q Consensus 2 ~~~~~~~~~~ve~A~a~a~~~~g-ip~~~a~~I~~a~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ie~~l~~~~g~ 80 (423)
++++|++|++||.|+|.+|++.| ||++.+++|.++|++ +.|+++.++++.+++-|.. .+.+ +.+.+.+|.
T Consensus 23 ~~~~i~a~l~ve~A~A~a~~~~G~ip~~~a~~I~~a~~~-------~~~d~~~~~~~~~~~~~~~-~~lv-~~l~~~~~~ 93 (452)
T PRK09053 23 DRATVQRMLDFEAALARAEAACGVIPAAAVAPIEAACDA-------ERLDLDALAQAAALAGNLA-IPLV-KQLTAQVAA 93 (452)
T ss_pred cHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHhccc-------cCCCHHHHHHHHhhcCCch-HHHH-HHHHHHhcc
Confidence 68999999999999999999999 999999999999975 3478888888877665543 2222 345566652
Q ss_pred cCCCcccccccccCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcceecccCCCCCcCCChhHHH
Q 014483 81 KRGEKIVHPNDHVNRSQSSNDTFPTVMHIAAAMETNSRLIPNLKVLHNSLHSKSVEFKDIVKIGRTHTQDATPLTLGQEF 160 (423)
Q Consensus 81 ~~g~~~~h~~~~v~~g~S~nDi~~Ta~~l~~~~~~~~~l~~~l~~l~~~L~~~A~~~~~~~m~grTh~Q~A~P~T~G~~~ 160 (423)
.. .|+++|||+|+||||+++|+++|++++ .+..+.+.|..|+++|.++|++|+||+||||||+|||+||||||||
T Consensus 94 ---~~-~~~~~~vH~G~SsnDi~~Ta~~l~lr~-~l~~l~~~l~~l~~~L~~~A~~~~~t~~~GrTH~Q~A~P~T~G~~~ 168 (452)
T PRK09053 94 ---RD-AEAARYVHWGATSQDIIDTGLVLQLRD-ALDLLEPDLDRLCDALATLAARHRATPMVGRTWLQQALPVTLGLKF 168 (452)
T ss_pred ---cC-cchhccccCCCChhhhHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHccCCeeehhccCCcceechHHHHH
Confidence 12 577788889999999999999998755 5689999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhhcccccccccCCCCCCCcchHHHHHHHHHHcCCCCCcCCchhHHhhhchHHHHHHHHH
Q 014483 161 SGYTTQVKYGIDRVICCLPRMYQLAQGGTAVGTGLNTKKGFDVKIASAVAEETSLPFVTAENKFEALAAHDAFVETSGAL 240 (423)
Q Consensus 161 a~~~~~l~r~~~rL~~~~~r~~~~~lGg~A~Gt~~~~~~~~~~~~~~~la~~LGl~~~~~~n~~da~~~rd~~~e~~~~l 240 (423)
++|+++|.|+++||.+++++++.+|||| ++||+.. .++++..+++++++.|||+.+..+| +++||++++++++|
T Consensus 169 ~~~~~~l~r~~~RL~~~~~~~~~~~lGg-avGt~~~-~~~~~~~v~~~~a~~LGl~~~~~~~----~~~rD~~~e~~~~l 242 (452)
T PRK09053 169 AGWLDALLRHRQRLAALRPRALVLQFGG-AAGTLAS-LGEQALPVAQALAAELQLALPALPW----HTQRDRIAEFASAL 242 (452)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhhccccc-hhhcccc-cccchHHHHHHHHHHcCCCCCCCCc----ccccHHHHHHHHHH
Confidence 9999999999999999999999999999 6999544 4567788999999999999865443 58999999999999
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCcceeEecCC--CCCCCCCCCCCCChhHHHHHHHHHHHhhhhhHHHhhhhcCcccccc
Q 014483 241 NTVAASLMKIANDVRLLGSGPRCGLGELILPE--NEPGSSIMPGKVNPTQCEALTMVCAQVIGNHVAITVGGSNGHFELN 318 (423)
Q Consensus 241 ~~~~~~L~ria~Dl~~~~s~~r~e~gev~~~~--~~~gSS~MPqKrNP~~~E~i~~~a~~~~g~~~~~~~~~~~~~~e~~ 318 (423)
++++++|+|||+||++|+ ++||||+.+|. +++|||||||||||+.+|.++++|+++.|+..+++. ...++++++
T Consensus 243 a~la~~L~kia~Di~ll~---~~e~gev~e~~~~~~~GSSiMP~KrNPv~~E~i~~~a~~v~g~~~~~~~-~~~~~~erd 318 (452)
T PRK09053 243 GLLAGTLGKIARDVSLLM---QTEVGEVFEPAAAGKGGSSTMPHKRNPVGCAAVLTAATRAPGLVATLFA-AMPQEHERA 318 (452)
T ss_pred HHHHHHHHHHHHHHHHHh---ccccchhhccccCCCCCcCCCCCCCCchHHHHHHHHHHHHHHHHHHHHH-hChhhhccc
Confidence 999999999999999999 57999998875 479999999999999999999999999999988754 667899999
Q ss_pred cchhhhHhhhhhHHHHHHHHHHHHHHHhhhCceeCHHHHHHHHHhhhhHH------HhhcccccHHHHHHH----HHHHH
Q 014483 319 VFKPMIASGLLHSLRLLGDASASFEKNCVRGIQANRERISKLLHESLMLV------TSLNPKIGYDNAAAV----AKKAH 388 (423)
Q Consensus 319 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~l~v~~~rm~~~l~~~~~~~------~~la~~~g~~~a~~~----~~~a~ 388 (423)
...|..+|..++.+..+...++..+..++++|+||++||++|+..+.+++ +.|++++||++||++ ++.+.
T Consensus 319 ~~~~~~~~~~l~~~~~~~~~al~~~~~~l~~l~v~~erm~~~l~~s~~~~~ae~~~~~La~~lgr~~Ah~iV~~~~~~a~ 398 (452)
T PRK09053 319 LGGWHAEWDTLPELACLAAGALAQMAQIVEGLEVDAARMRANLDLTHGLILAEAVMLALADRIGRLDAHHLVEQASKRAV 398 (452)
T ss_pred CCccHHHHHHHHHHHHHHHHHHHHHHHHHcCCEECHHHHHHHHHhcCCHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHH
Confidence 99999889777777776666666667999999999999999999888665 789999999999987 56788
Q ss_pred HcCCCHHHHHHHc----CCCCHHHHhhccCcccccCCC
Q 014483 389 KEGTTLKDAALKL----GVLNSEEFDNLVVPEKMIGPS 422 (423)
Q Consensus 389 ~~g~~l~e~~~~~----~~l~~~~l~~~~dp~~~~g~~ 422 (423)
++|+++++++.++ +.++++++++++||.+|+|..
T Consensus 399 ~~g~~~~~~~~~~~~~~~~l~~~~l~~~l~P~~~~g~~ 436 (452)
T PRK09053 399 AEGRHLRDVLAEDPQVSAHLSPAALDRLLDPAHYLGQA 436 (452)
T ss_pred HHCCCHHHHHHhChhhhccCCHHHHHHHcCHHHHhcch
Confidence 8999999999886 678999999999999999963
No 16
>PLN02646 argininosuccinate lyase
Probab=100.00 E-value=1.7e-77 Score=615.38 Aligned_cols=389 Identities=22% Similarity=0.259 Sum_probs=336.7
Q ss_pred CHHHHHHHHHHHHHHHHHHHHcC-CCHHHHHHHHHHHHHHHccccCCCCcccccccCcccccccchHHHHHHHHHHHhCc
Q 014483 2 PEPIVRAFGILKKCAAKVNMEYG-LDPAIGKAIMQAAQEVAEGKLNDHFPLVVWQTGSGTQSNMNANEVIANRAAEILGH 80 (423)
Q Consensus 2 ~~~~~~~~~~ve~A~a~a~~~~g-ip~~~a~~I~~a~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ie~~l~~~~g~ 80 (423)
+...++.-+.+..||++++.+.| ||++++++|.++|+++.++..++.|++++ + .+|+|++ +|+++++++|
T Consensus 41 d~~l~~~di~~~~Aha~~L~~~Gii~~~~a~~I~~al~~i~~~~~~~~f~~~~---~-~ed~h~~----iE~~L~e~~G- 111 (474)
T PLN02646 41 DKRLYKEDIMGSKAHASMLAKQGIITDEDRDSILDGLDEIEKEIEAGKFEWRP---D-REDVHMN----NEARLTELIG- 111 (474)
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHcCcccCCCcCCC---C-CCchHHH----HHHHHHHHhc-
Confidence 45677888889999999999999 99999999999999998776667888654 2 3677777 7899999999
Q ss_pred cCCCcccccccccCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcceecccCCCCCcCCChhHHH
Q 014483 81 KRGEKIVHPNDHVNRSQSSNDTFPTVMHIAAAMETNSRLIPNLKVLHNSLHSKSVEFKDIVKIGRTHTQDATPLTLGQEF 160 (423)
Q Consensus 81 ~~g~~~~h~~~~v~~g~S~nDi~~Ta~~l~~~~~~~~~l~~~l~~l~~~L~~~A~~~~~~~m~grTh~Q~A~P~T~G~~~ 160 (423)
+.|+| +|+ |||||||++|+++|++++. +..+.+.|..|+++|.++|++|+||+||||||+|||||||||||+
T Consensus 112 ~~g~~-lH~------grSrND~v~Ta~~L~lr~~-l~~l~~~L~~L~~~L~~~A~~~~dtvmpGrTHlQ~AqPiT~G~~l 183 (474)
T PLN02646 112 EPAKK-LHT------ARSRNDQVATDTRLWCRDA-IDVIRKRIKTLQVALVELAEKNVDLVVPGYTHLQRAQPVLLSHWL 183 (474)
T ss_pred hhhCc-ccC------CCChhhHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHcCCCEEecccCCccceeecHHHHH
Confidence 67888 885 9999999999999998765 579999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhhcccccccc-cCCCCCCCcchHHHHHHHHHHcCCCCCcCCchhHHhhhchHHHHHHHH
Q 014483 161 SGYTTQVKYGIDRVICCLPRMYQLAQGGTAV-GTGLNTKKGFDVKIASAVAEETSLPFVTAENKFEALAAHDAFVETSGA 239 (423)
Q Consensus 161 a~~~~~l~r~~~rL~~~~~r~~~~~lGg~A~-Gt~~~~~~~~~~~~~~~la~~LGl~~~~~~n~~da~~~rd~~~e~~~~ 239 (423)
++|+++|.|+++||.+++++++.+|||||++ ||++++++. ++|++|||.. +..|++||+++||++++++++
T Consensus 184 ~~~~~~l~rd~~RL~~~~~r~~~~pLGgga~aGt~~~idr~-------~~A~~LGf~~-~~~n~~da~~~RD~~~e~~~~ 255 (474)
T PLN02646 184 LSHVEQLERDAGRLVDCRPRVNFCPLGSCALAGTGLPIDRF-------MTAKDLGFTA-PMRNSIDAVSDRDFVLEFLFA 255 (474)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhcCCcchhhcCCCCCCCHH-------HHHHHhCCCC-CCCChHHHHhccHHHHHHHHH
Confidence 9999999999999999999999999999997 999988874 7999999986 778999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCCcceeEecCCC-CCCCCCCCCCCChhHHHHHHHHHHHhhhhhHHHhhhhcCc--ccc
Q 014483 240 LNTVAASLMKIANDVRLLGSGPRCGLGELILPEN-EPGSSIMPGKVNPTQCEALTMVCAQVIGNHVAITVGGSNG--HFE 316 (423)
Q Consensus 240 l~~~~~~L~ria~Dl~~~~s~~r~e~gev~~~~~-~~gSS~MPqKrNP~~~E~i~~~a~~~~g~~~~~~~~~~~~--~~e 316 (423)
+++++++|+|||+||++|+| +|||++.+|+. ++|||||||||||+.+|.+|++|+++.|++.+++....+. .++
T Consensus 256 la~ia~~LsRia~Dl~l~ss---~e~g~v~~~d~~~~GSSiMPqKrNP~~~E~ir~~a~~v~G~~~~~~~~~~~~p~~~~ 332 (474)
T PLN02646 256 NSITAIHLSRLGEEWVLWAS---EEFGFVTPSDAVSTGSSIMPQKKNPDPMELVRGKSARVIGDLVTVLALCKGLPTAYN 332 (474)
T ss_pred HHHHHHHHHHHHHHHHHHcC---CCCCeeeeCCCCCCCcCCCCCCCCCHHHHHHHHHHHHHHhhhHHHHHHhcCCchHhh
Confidence 99999999999999999997 47999999875 8999999999999999999999999999999988644322 333
Q ss_pred cccchhhhHh-hhhhHHHHHHHHHHHHHHHhhhCceeCHHHHHHHHHhhhhHHHhhc----c-cccHHHHHHH----HHH
Q 014483 317 LNVFKPMIAS-GLLHSLRLLGDASASFEKNCVRGIQANRERISKLLHESLMLVTSLN----P-KIGYDNAAAV----AKK 386 (423)
Q Consensus 317 ~~~~~~~~~~-~~l~~~~~~~~~~~~~~~~~l~~l~v~~~rm~~~l~~~~~~~~~la----~-~~g~~~a~~~----~~~ 386 (423)
++.. ..| .+++++..+..++..+ ..++++|+||++||++|+..++.++++++ + .+||++||++ |+.
T Consensus 333 rD~q---~~~~~l~~~~~~~~~~l~~~-~~~l~~l~v~~~rm~~~l~~~~~~At~la~~Lv~~Gi~fr~Ah~iV~~~v~~ 408 (474)
T PLN02646 333 RDLQ---EDKEPLFDSVDTVSDMLEVA-TEFAQNITFNPERIKKSLPAGMLDATTLADYLVRKGVPFRETHHIVGAAVAL 408 (474)
T ss_pred cchh---hHHHHHHHHHHHHHHHHHHH-HHHHccCEECHHHHHHHHHcCccHHHHHHHHHHHcCCCHHHHHHHHHHHHHH
Confidence 4321 122 3556666666666666 57999999999999999998888887765 3 3899999964 456
Q ss_pred HHHcCCCHHHHHHHc----CCCCHHHHhhccCcccccCCC
Q 014483 387 AHKEGTTLKDAALKL----GVLNSEEFDNLVVPEKMIGPS 422 (423)
Q Consensus 387 a~~~g~~l~e~~~~~----~~l~~~~l~~~~dp~~~~g~~ 422 (423)
+.++|+++.++..+. ....++++..++||+.+|..+
T Consensus 409 a~~~g~~l~~l~~~~~~~~~~~~~~~~~~~l~~~~~v~~r 448 (474)
T PLN02646 409 AESKGCELSDLTLEDLKSINPVFEEDVYEVLGVENSVEKF 448 (474)
T ss_pred HHHhCCCHHHHHHHHHHHhcccchHHHHHhCCHHHHHHHc
Confidence 788999999987653 344567799999999998655
No 17
>TIGR00838 argH argininosuccinate lyase. This model describes argininosuccinate lyase, but may include examples of avian delta crystallins, in which argininosuccinate lyase activity may or may not be present and the biological role is to provide the optically clear cellular protein of the eye lens.
Probab=100.00 E-value=2.5e-77 Score=614.92 Aligned_cols=393 Identities=21% Similarity=0.229 Sum_probs=340.9
Q ss_pred CHHHHHHHHHHHHHHHHHHHHcC-CCHHHHHHHHHHHHHHHccccCCCCcccccccCcccccccchHHHHHHHHHHHhCc
Q 014483 2 PEPIVRAFGILKKCAAKVNMEYG-LDPAIGKAIMQAAQEVAEGKLNDHFPLVVWQTGSGTQSNMNANEVIANRAAEILGH 80 (423)
Q Consensus 2 ~~~~~~~~~~ve~A~a~a~~~~g-ip~~~a~~I~~a~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ie~~l~~~~g~ 80 (423)
+...++..+.++.||+.++.+.| ||++++++|.++|+++.++..++.|++++.+ +|+|+ +||+++++++|+
T Consensus 24 d~~l~~~~i~~~~Ah~~~L~~~G~l~~~~a~~I~~al~~i~~~~~~~~~~~~~~~----~d~~~----~ie~~l~e~~g~ 95 (455)
T TIGR00838 24 DKELAEYDIEGSIAHTKMLKKAGILTEEEAAKIIEGLNELKEEGREGPFILDPDD----EDIHM----AIERELIDRVGE 95 (455)
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHcCcccCCcCCCCCc----CcHHH----HHHHHHHHHhCC
Confidence 35677888899999999999999 9999999999999999887666778887754 44444 699999999997
Q ss_pred cCCCcccccccccCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcceecccCCCCCcCCChhHHH
Q 014483 81 KRGEKIVHPNDHVNRSQSSNDTFPTVMHIAAAMETNSRLIPNLKVLHNSLHSKSVEFKDIVKIGRTHTQDATPLTLGQEF 160 (423)
Q Consensus 81 ~~g~~~~h~~~~v~~g~S~nDi~~Ta~~l~~~~~~~~~l~~~l~~l~~~L~~~A~~~~~~~m~grTh~Q~A~P~T~G~~~ 160 (423)
+.|+| +|+ |+||||+++|+++|++++. +..+.+.|..|+++|.++|++|+|++||||||+||||||||||||
T Consensus 96 ~~g~~-iH~------g~SrnD~~~Ta~~L~lr~~-l~~l~~~L~~l~~~L~~~A~~~~~~~m~grTH~Q~A~P~T~G~~~ 167 (455)
T TIGR00838 96 DLGGK-LHT------GRSRNDQVATDLRLYLRDH-VLELAEALLDLQDALIELAEKHVETLMPGYTHLQRAQPITLAHHL 167 (455)
T ss_pred CccCC-ccC------CCChhhHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHccCCEeecccccccceeccHHHHH
Confidence 77877 884 9999999999999998765 568999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhhcccccccc-cCCCCCCCcchHHHHHHHHHHcCCCCCcCCchhHHhhhchHHHHHHHH
Q 014483 161 SGYTTQVKYGIDRVICCLPRMYQLAQGGTAV-GTGLNTKKGFDVKIASAVAEETSLPFVTAENKFEALAAHDAFVETSGA 239 (423)
Q Consensus 161 a~~~~~l~r~~~rL~~~~~r~~~~~lGg~A~-Gt~~~~~~~~~~~~~~~la~~LGl~~~~~~n~~da~~~rd~~~e~~~~ 239 (423)
++|+++|.|+++||.+++++++.+|||||++ ||+++.++. ++++.|||+. +..|++||+++||++++++++
T Consensus 168 ~~~~~~L~r~~~rL~~~~~~~~~~plGg~a~aGt~~~~~r~-------~~a~~LG~~~-~~~n~~~a~~~rd~~~e~~~~ 239 (455)
T TIGR00838 168 LAYAEMLLRDYERLQDALKRVNVSPLGSGALAGTGFPIDRE-------YLAELLGFDA-VTENSLDAVSDRDFILELLFV 239 (455)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccCCcchhcccCCCCCCCHH-------HHHHHcCCCC-CcCCHHHHHhCcHHHHHHHHH
Confidence 9999999999999999999999999999988 998887764 6999999998 578999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCCcceeEecCCC-CCCCCCCCCCCChhHHHHHHHHHHHhhhhhHHHhhhhcCcccccc
Q 014483 240 LNTVAASLMKIANDVRLLGSGPRCGLGELILPEN-EPGSSIMPGKVNPTQCEALTMVCAQVIGNHVAITVGGSNGHFELN 318 (423)
Q Consensus 240 l~~~~~~L~ria~Dl~~~~s~~r~e~gev~~~~~-~~gSS~MPqKrNP~~~E~i~~~a~~~~g~~~~~~~~~~~~~~e~~ 318 (423)
++.++++|+|||+||++|+| +||||+.+|+. ++|||||||||||+.+|.++++++++.|+..+++....+.+++.+
T Consensus 240 l~~~a~~L~ria~Dl~l~ss---~e~gei~lp~~~~~GSSiMP~K~NP~~~E~i~~~a~~~~g~~~~~~~~~~~~~~~~~ 316 (455)
T TIGR00838 240 AALIMVHLSRFAEDLILWST---GEFGFVELPDEFSSGSSIMPQKKNPDVAELIRGKTGRVQGNLTGMLMTLKALPLAYN 316 (455)
T ss_pred HHHHHHHHHHHHHHHHHHhC---CCCCeeeCCCCCCCccCCCCCCcCChHHHHHHHHHHHHhhhHHHHHHHHhcCChHhh
Confidence 99999999999999999997 47999999986 899999999999999999999999999999999876655554433
Q ss_pred cchhhhHhhhhhHHHHHHHHHHHHHHHhhhCceeCHHHHHHHHHhhhhHHHhhccc-----ccHHHHHH----HHHHHHH
Q 014483 319 VFKPMIASGLLHSLRLLGDASASFEKNCVRGIQANRERISKLLHESLMLVTSLNPK-----IGYDNAAA----VAKKAHK 389 (423)
Q Consensus 319 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~l~v~~~rm~~~l~~~~~~~~~la~~-----~g~~~a~~----~~~~a~~ 389 (423)
.........+++.+..+..++..+. .++++|+||+++|++|+..++.+++.+++. +||++||+ +++.+.+
T Consensus 317 rd~~~~~~~l~~~~~~~~~al~~~~-~~i~~l~v~~~rm~~~~~~~~~~at~la~~Lv~~g~~~r~Ah~~v~~~~~~a~~ 395 (455)
T TIGR00838 317 RDLQEDKEPLFDALKTVELSLEMAT-GMLDTITVNKERMEEAASAGFSNATELADYLVRKGVPFREAHHIVGELVATAIE 395 (455)
T ss_pred hhhHhhHHHHHHHHHHHHHHHHHHH-HHHccCEECHHHHHHHHHcCccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHH
Confidence 2222222345666666777777765 699999999999999999988888776543 67777775 5556888
Q ss_pred cCCCHHHHHHHcC----CCCHHHHhhccCcccccCCC
Q 014483 390 EGTTLKDAALKLG----VLNSEEFDNLVVPEKMIGPS 422 (423)
Q Consensus 390 ~g~~l~e~~~~~~----~l~~~~l~~~~dp~~~~g~~ 422 (423)
+|++++|++.++. .+.+++++.++||..++..+
T Consensus 396 ~g~~l~~~~~~~~~~~~~~~~~~l~~~ldp~~~v~~r 432 (455)
T TIGR00838 396 RGKGLEELTLEELQKFSPEFDEDVYEALDPESSVEKR 432 (455)
T ss_pred cCCCHHHHHHHHHhhhcccCHHHHHHHCCHHHHHHhc
Confidence 9999999988753 24567799999999998755
No 18
>PRK06705 argininosuccinate lyase; Provisional
Probab=100.00 E-value=2.4e-77 Score=618.10 Aligned_cols=391 Identities=18% Similarity=0.194 Sum_probs=326.0
Q ss_pred CHHHHHHHHHHHHHHHHHHHHcC-CCHHHHHHHHHHHHHHHccccCCCCcccccccCcccccccchHHHHHHHHHHHhCc
Q 014483 2 PEPIVRAFGILKKCAAKVNMEYG-LDPAIGKAIMQAAQEVAEGKLNDHFPLVVWQTGSGTQSNMNANEVIANRAAEILGH 80 (423)
Q Consensus 2 ~~~~~~~~~~ve~A~a~a~~~~g-ip~~~a~~I~~a~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ie~~l~~~~g~ 80 (423)
++++++.|++++.||+.+|.+.| ||++++++|.+++.++.+. ..+.+..+ ..++| ++..||.++++..|+
T Consensus 34 ~~~~~~~~l~ve~Aha~~l~~~GiIp~e~a~~I~~al~~~~~~-~~~~l~~~----~~~ed----v~~~ie~~l~~~~G~ 104 (502)
T PRK06705 34 RNYLLKDMFQVHKAHIVMLTEENLMKKEEAKFILHALKKVEEI-PEEQLLYT----EQHED----LFFLVEHLISQEAKS 104 (502)
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHhhhc-ccCccccC----CCCCc----hHHHHHHHHHHhcCc
Confidence 46899999999999999999999 9999999999999877431 12333322 22344 555688888888876
Q ss_pred cCCCcccccccccCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcceecccCCCCCcCCChhHHH
Q 014483 81 KRGEKIVHPNDHVNRSQSSNDTFPTVMHIAAAMETNSRLIPNLKVLHNSLHSKSVEFKDIVKIGRTHTQDATPLTLGQEF 160 (423)
Q Consensus 81 ~~g~~~~h~~~~v~~g~S~nDi~~Ta~~l~~~~~~~~~l~~~l~~l~~~L~~~A~~~~~~~m~grTh~Q~A~P~T~G~~~ 160 (423)
+.|+| +|+ |+|||||++|+++|++++. +..+.+.|..++++|.++|++|+||+||||||+|||||||||||+
T Consensus 105 ~~g~~-lH~------GrSrnD~v~Ta~~L~lr~~-l~~l~~~l~~l~~~l~~~A~~~~~t~m~g~TH~Q~AqP~T~G~~l 176 (502)
T PRK06705 105 DFVSN-MHI------GRSRNDMGVTMYRMSLRRY-VLRLMEHHLLLQESILQLAADHKETIMPAYTHTQPAQPTTFGHYT 176 (502)
T ss_pred hhhcc-ccC------CCCHhhHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHcCCCEEecccCCccceehHHHHHH
Confidence 67888 885 9999999999999998765 579999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhhcccccccc-cCCCCCCCcchHHHHHHHHHHcCCCCCcCCchhHHhhhchHHHHHHHH
Q 014483 161 SGYTTQVKYGIDRVICCLPRMYQLAQGGTAV-GTGLNTKKGFDVKIASAVAEETSLPFVTAENKFEALAAHDAFVETSGA 239 (423)
Q Consensus 161 a~~~~~l~r~~~rL~~~~~r~~~~~lGg~A~-Gt~~~~~~~~~~~~~~~la~~LGl~~~~~~n~~da~~~rd~~~e~~~~ 239 (423)
++|+++|.|+++||.+++++++.+||||+|. ||+++++ ++++|++|||+. +..|++|++++||+++|++++
T Consensus 177 ~~~~~~l~r~~~rL~~~~~r~~~~plGgaag~gt~~~~~-------r~~~a~~LGf~~-~~~ns~~a~~~rD~~~e~~~~ 248 (502)
T PRK06705 177 LAIYDTMQRDLERMKKTYKLLNQSPMGAAALSTTSFPIK-------RERVADLLGFTN-VIENSYDAVAGADYLLEVSSL 248 (502)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCcCCchhhhhccCCchHH-------HHHHHHHcCCCC-CcCCHHHHHhccHHHHHHHHH
Confidence 9999999999999999999999999999654 5555433 468999999997 577999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCCcceeEecCCC-CCCCCCCCCCCChhHHHHHHHHHHHhhhhhHHHhhhhcCcccccc
Q 014483 240 LNTVAASLMKIANDVRLLGSGPRCGLGELILPEN-EPGSSIMPGKVNPTQCEALTMVCAQVIGNHVAITVGGSNGHFELN 318 (423)
Q Consensus 240 l~~~~~~L~ria~Dl~~~~s~~r~e~gev~~~~~-~~gSS~MPqKrNP~~~E~i~~~a~~~~g~~~~~~~~~~~~~~e~~ 318 (423)
+++++++|+|||+||++|+| +|||++++|+. ++|||||||||||+.+|++|++++++.|++++++....+. ++++
T Consensus 249 la~~~~~L~Ria~Dl~~~ss---~e~g~iel~e~~~~gSSiMPqKrNP~~~E~ir~~a~~~~g~~~~~l~~~~~~-~~~~ 324 (502)
T PRK06705 249 LMVMMTNTSRWIHDFLLLAT---KEYDGITVARPYVQISSIMPQKRNPVSIEHARAITSSALGEAFTVFQMIHNT-PFGD 324 (502)
T ss_pred HHHHHHHHHHHHHHHHHHcC---CCCCeeeecCCCCCccCCCCCCcCCHHHHHHHHHHHHHHHHHHHHHHHhcCC-cchh
Confidence 99999999999999999996 58998888876 7899999999999999999999999999999888754333 3332
Q ss_pred cchhhhHhhhhhHHHHHHHHH---HHHHHHhhhCceeCHHHHHHHHHhhhhHHHhh----ccc--ccHHHHHHHH----H
Q 014483 319 VFKPMIASGLLHSLRLLGDAS---ASFEKNCVRGIQANRERISKLLHESLMLVTSL----NPK--IGYDNAAAVA----K 385 (423)
Q Consensus 319 ~~~~~~~~~~l~~~~~~~~~~---~~~~~~~l~~l~v~~~rm~~~l~~~~~~~~~l----a~~--~g~~~a~~~~----~ 385 (423)
... .+|.+.+.+..+.+.+ +..+..++++|+||++||++|+..++.+++++ +++ +||++||++| .
T Consensus 325 ~~d--~q~~~~~~~~~~~~~~~~~l~~~~~~l~~l~v~~~rm~~~~~~g~~~At~la~~Lv~~~Gl~fr~Ah~iV~~~v~ 402 (502)
T PRK06705 325 IVD--TEDDLQPYLYKGIEKAIRVFCIMNAVIRTMKVEEDTLKRRSYKHAITITDFADVLTKNYGIPFRHAHHAASVIAN 402 (502)
T ss_pred hhh--hHhhhhhHHHHHHHHHHHHHHHHHHHHCcCEECHHHHHHHHhcCchHHHHHHHHHHHhcCCCHHHHHHHHHHHHH
Confidence 222 3344444444444444 44446899999999999999999888777655 443 8999999755 4
Q ss_pred HHHHcCCCHHHHHHHc----------CCCCHHHHhhccCcccccCCCC
Q 014483 386 KAHKEGTTLKDAALKL----------GVLNSEEFDNLVVPEKMIGPSD 423 (423)
Q Consensus 386 ~a~~~g~~l~e~~~~~----------~~l~~~~l~~~~dp~~~~g~~~ 423 (423)
.+.++|++|.+++.++ ..+++++++.++||.+|++.++
T Consensus 403 ~a~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~ldp~~~v~~r~ 450 (502)
T PRK06705 403 MSLEQKKELHELCFKDVNIYLQEKFKIQLLEKEWEEIISPEAFIQKRN 450 (502)
T ss_pred HHHHhCCCHHHhhHHHHHhhhhhhhhhcCCHHHHHHHCCHHHHHhhcc
Confidence 5778899998876543 3478899999999999999764
No 19
>PRK07492 adenylosuccinate lyase; Provisional
Probab=100.00 E-value=2.4e-77 Score=608.75 Aligned_cols=391 Identities=20% Similarity=0.228 Sum_probs=330.3
Q ss_pred CHHHHHHHHHHHHHHHHHHHHcC-CCHHHHHHHHHHHHHHHccccCCCCcccccccCcccccccchHHHHHHHHHHHhCc
Q 014483 2 PEPIVRAFGILKKCAAKVNMEYG-LDPAIGKAIMQAAQEVAEGKLNDHFPLVVWQTGSGTQSNMNANEVIANRAAEILGH 80 (423)
Q Consensus 2 ~~~~~~~~~~ve~A~a~a~~~~g-ip~~~a~~I~~a~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ie~~l~~~~g~ 80 (423)
+++++++|++||.|++.+|++.| ||++++++|.+++... .+++..+.+... ....++.. ++..+++.+|+
T Consensus 16 ~~~~~~~~l~vE~ala~a~~~~g~ip~~aa~~i~~~~~~~-------~~d~~~~~~~~~-~~~h~v~a-~~~~L~~~~g~ 86 (435)
T PRK07492 16 PETKFRIWFEIEAHACEAQAELGVIPKEAAETIWEKGKDA-------EFDVARIDEIEA-VTKHDVIA-FLTHLAEFVGP 86 (435)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHhCccc-------CCCHHHHHHHHH-HhCCChHH-HHHHHHHHhhH
Confidence 46899999999999999999999 9999999998876320 012221111100 01122222 45678888984
Q ss_pred cCCCcccccccccCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcceecccCCCCCcCCChhHHH
Q 014483 81 KRGEKIVHPNDHVNRSQSSNDTFPTVMHIAAAMETNSRLIPNLKVLHNSLHSKSVEFKDIVKIGRTHTQDATPLTLGQEF 160 (423)
Q Consensus 81 ~~g~~~~h~~~~v~~g~S~nDi~~Ta~~l~~~~~~~~~l~~~l~~l~~~L~~~A~~~~~~~m~grTh~Q~A~P~T~G~~~ 160 (423)
.|+| +|+ |+|||||+||+++|++++ .+..+.+.|..++++|.++|++|+||+||||||+|||+|||||||+
T Consensus 87 -~~~~-vH~------G~Ts~Di~dTa~~L~lr~-~~~~l~~~l~~l~~~L~~~A~~~~~t~m~grTH~Q~A~P~TfG~~~ 157 (435)
T PRK07492 87 -DARF-VHQ------GMTSSDVLDTCLNVQLVR-AADLLLADLDRVLAALKKRAFEHKDTPTIGRSHGIHAEPTTFGLKL 157 (435)
T ss_pred -hhhh-hcC------CCChhhhHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHcCCCEEeeccCCccceehhHHHHH
Confidence 4777 885 999999999999998865 5789999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhhcccccccccCCCCCCCcchHHHHHHHHHHcCCCCCcCCchhHHhhhchHHHHHHHHH
Q 014483 161 SGYTTQVKYGIDRVICCLPRMYQLAQGGTAVGTGLNTKKGFDVKIASAVAEETSLPFVTAENKFEALAAHDAFVETSGAL 240 (423)
Q Consensus 161 a~~~~~l~r~~~rL~~~~~r~~~~~lGg~A~Gt~~~~~~~~~~~~~~~la~~LGl~~~~~~n~~da~~~rd~~~e~~~~l 240 (423)
++|+++|.|+++||.+++++++.+|||| |+||++++++ ++++++++.|||+.++.+| ++++||+++++++++
T Consensus 158 a~~~~~l~r~~~rL~~~~~~~~~~~lgG-AvGT~~~~~~----~~~~~~a~~LGl~~~~~~~---~v~~RD~~~e~~~~l 229 (435)
T PRK07492 158 ARFYAEFARNRERLVAAREEIATCAISG-AVGTFANIDP----RVEEHVAKKLGLKPEPVST---QVIPRDRHAMFFATL 229 (435)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhhccCcc-cccCCccCCh----HHHHHHHHHhCCCCCCccc---cccccHHHHHHHHHH
Confidence 9999999999999999999999999987 8999888763 6778999999999755443 268999999999999
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCcceeEecC--CCCCCCCCCCCCCChhHHHHHHHHHHHhhhhhHHHhhhhcCcccccc
Q 014483 241 NTVAASLMKIANDVRLLGSGPRCGLGELILP--ENEPGSSIMPGKVNPTQCEALTMVCAQVIGNHVAITVGGSNGHFELN 318 (423)
Q Consensus 241 ~~~~~~L~ria~Dl~~~~s~~r~e~gev~~~--~~~~gSS~MPqKrNP~~~E~i~~~a~~~~g~~~~~~~~~~~~~~e~~ 318 (423)
++++++|+|||+|+++|+ ++||+|+.++ ++++|||+|||||||+.+|+++++++.+.|...+++. ....+++++
T Consensus 230 a~~~~~L~ria~Di~~l~---~~e~~El~e~~~~g~~GSS~MPhKrNP~~~E~i~~~a~~~~~~~~~~~~-~~~~~~eRD 305 (435)
T PRK07492 230 GVIASSIERLAIEIRHLQ---RTEVLEAEEFFSPGQKGSSAMPHKRNPVLTENLTGLARLVRSYVVPAME-NVALWHERD 305 (435)
T ss_pred HHHHHHHHHHHHHHHHHh---ccccchhccccCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHH-hcchhhccC
Confidence 999999999999999999 5799999976 4579999999999999999999999999999766655 345677888
Q ss_pred cchhhhHhhhhhHHHHHHHHHHHHHHHhhhCceeCHHHHHHHHHhhhhH--H----Hhhccc-ccHHHHHHHH----HHH
Q 014483 319 VFKPMIASGLLHSLRLLGDASASFEKNCVRGIQANRERISKLLHESLML--V----TSLNPK-IGYDNAAAVA----KKA 387 (423)
Q Consensus 319 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~l~v~~~rm~~~l~~~~~~--~----~~la~~-~g~~~a~~~~----~~a 387 (423)
...|..+|..+|.+..+...++..+..++++|+||++||++|+..+.++ + ..|+++ +||++||+++ +.+
T Consensus 306 ~~~~~~e~~~lp~~~~~~~~~l~~~~~~l~~L~v~~~rm~~nl~~~~g~i~ae~~~~~L~~~g~~r~~Ah~~V~~~~~~a 385 (435)
T PRK07492 306 ISHSSVERMIGPDATITLDFALNRLAGVIEKLVVYPENMLKNLNKFGGLVHSQRVLLALTQAGVSREDAYRLVQRNAMKV 385 (435)
T ss_pred ChHHHHhhhHHHHHHHHHHHHHHHHHHHHccCEECHHHHHHHHhhcCChhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHH
Confidence 8878888999999988888777777899999999999999999964443 2 346675 8999998655 577
Q ss_pred HHcCCCHHHHHHHc----CCCCHHHHhhccCcccccCCC
Q 014483 388 HKEGTTLKDAALKL----GVLNSEEFDNLVVPEKMIGPS 422 (423)
Q Consensus 388 ~~~g~~l~e~~~~~----~~l~~~~l~~~~dp~~~~g~~ 422 (423)
.++|.+|.|.+.++ ..++++||+++|||.+|+|.-
T Consensus 386 ~~~~~~l~e~l~~~~~~~~~l~~~el~~~~dp~~ylg~~ 424 (435)
T PRK07492 386 WEQGGDFLEELKADPEVRAALSEEEIEELFDLGYHTKHV 424 (435)
T ss_pred HHhCCCHHHHHhCCHHhHhcCCHHHHHHHhCHHHHhcch
Confidence 77899999999876 488999999999999999963
No 20
>cd01597 pCLME prokaryotic 3-carboxy-cis,cis-muconate cycloisomerase (CMLE)_like. This subgroup contains pCLME and related proteins, and belongs to the Lyase class I family. Members of this family for the most part catalyze similar beta-elimination reactions in which a C-N or C-O bond is cleaved with the release of fumarate as one of the products. These proteins are active as tetramers. The four active sites of the homotetrameric enzyme are each formed by residues from three different subunits. CMLE catalyzes the cyclization of 3-carboxy-cis,cis-muconate (3CM) to 4-carboxy-muconolactone in the beta-ketoadipate pathway. This pathway is responsible for the catabolism of a variety of aromatic compounds into intermediates of the citric cycle in prokaryotic and eukaryotic micro-organisms.
Probab=100.00 E-value=4.8e-77 Score=610.71 Aligned_cols=394 Identities=24% Similarity=0.291 Sum_probs=338.0
Q ss_pred CHHHHHHHHHHHHHHHHHHHHcC-CCHHHHHHHHHHHHHHHccccCCCCcccccccCcccccccchHHHHHHHHHHHhCc
Q 014483 2 PEPIVRAFGILKKCAAKVNMEYG-LDPAIGKAIMQAAQEVAEGKLNDHFPLVVWQTGSGTQSNMNANEVIANRAAEILGH 80 (423)
Q Consensus 2 ~~~~~~~~~~ve~A~a~a~~~~g-ip~~~a~~I~~a~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ie~~l~~~~g~ 80 (423)
+++++++|+.||.||+.+|.+.| ||++++++|.++++++.. +++.+.++.+++.|. ...++.++++++|+
T Consensus 17 ~~~~i~~~~~ve~A~a~~l~~~Gii~~~~a~~I~~al~~~~~-------~~~~~~~~~~~~~~~--v~a~e~~l~e~~g~ 87 (437)
T cd01597 17 DENRVQAMLDVEAALARAQAELGVIPKEAAAEIAAAADVERL-------DLEALAEATARTGHP--AIPLVKQLTAACGD 87 (437)
T ss_pred cHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHhccccCC-------CHHHHHHHHHHhCCC--cHHHHHHHHHHcCc
Confidence 68999999999999999999999 999999999999876521 122232222332222 12366778899996
Q ss_pred cCCCcccccccccCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcceecccCCCCCcCCChhHHH
Q 014483 81 KRGEKIVHPNDHVNRSQSSNDTFPTVMHIAAAMETNSRLIPNLKVLHNSLHSKSVEFKDIVKIGRTHTQDATPLTLGQEF 160 (423)
Q Consensus 81 ~~g~~~~h~~~~v~~g~S~nDi~~Ta~~l~~~~~~~~~l~~~l~~l~~~L~~~A~~~~~~~m~grTh~Q~A~P~T~G~~~ 160 (423)
+.|+| +|+ |+||||+++|+++|++++. +..+.+.|..|+++|.++|++|+|++||||||+||||||||||||
T Consensus 88 ~~g~~-lH~------grSrnD~~~Ta~~l~lr~~-l~~l~~~l~~l~~~L~~~A~~~~~~~m~grTH~Q~A~P~T~G~~~ 159 (437)
T cd01597 88 AAGEY-VHW------GATTQDIIDTALVLQLRDA-LDLLERDLDALLDALARLAATHRDTPMVGRTHLQHALPITFGLKV 159 (437)
T ss_pred cccCe-eec------CccHhHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHhcCCeeehhhcCccceechHHHHH
Confidence 66787 885 9999999999999998665 579999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhhcccccccccCCCCCCCcchHHHHHHHHHHcCCCCCcCCchhHHhhhchHHHHHHHHH
Q 014483 161 SGYTTQVKYGIDRVICCLPRMYQLAQGGTAVGTGLNTKKGFDVKIASAVAEETSLPFVTAENKFEALAAHDAFVETSGAL 240 (423)
Q Consensus 161 a~~~~~l~r~~~rL~~~~~r~~~~~lGg~A~Gt~~~~~~~~~~~~~~~la~~LGl~~~~~~n~~da~~~rd~~~e~~~~l 240 (423)
++|+++|.|+++||.+++++++.+|||| |+||+.+. +.++..+++++++.|||+.+. .+ |+++||+++++++++
T Consensus 160 ~~~~~~l~r~~~rL~~~~~~~~~~~lGg-a~Gtg~~~-~~~~~~~~~~~a~~LGf~~~~-~~---~~~~rd~~~e~~~~l 233 (437)
T cd01597 160 AVWLSELLRHRERLDELRPRVLVVQFGG-AAGTLASL-GDQGLAVQEALAAELGLGVPA-IP---WHTARDRIAELASFL 233 (437)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhhhcccc-cccccccc-CCcHHHHHHHHHHHcCCCCCC-Cc---cccCcHHHHHHHHHH
Confidence 9999999999999999999999999999 78876643 445667889999999999854 32 579999999999999
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCcceeEecCC--CCCCCCCCCCCCChhHHHHHHHHHHHhhhhhHHHhhhhcCcccccc
Q 014483 241 NTVAASLMKIANDVRLLGSGPRCGLGELILPE--NEPGSSIMPGKVNPTQCEALTMVCAQVIGNHVAITVGGSNGHFELN 318 (423)
Q Consensus 241 ~~~~~~L~ria~Dl~~~~s~~r~e~gev~~~~--~~~gSS~MPqKrNP~~~E~i~~~a~~~~g~~~~~~~~~~~~~~e~~ 318 (423)
+.++++|+|||+|+++|++ +||||+.+|+ .++|||||||||||+.+|.++++|+++.|+.++++. ...++++++
T Consensus 234 ~~~a~~l~rla~Dl~l~s~---~e~gel~~~~~~~~~GSSiMPqK~NP~~~E~i~~~a~~~~g~~~~~~~-~~~~~~erd 309 (437)
T cd01597 234 ALLTGTLGKIARDVYLLMQ---TEIGEVAEPFAKGRGGSSTMPHKRNPVGCELIVALARRVPGLAALLLD-AMVQEHERD 309 (437)
T ss_pred HHHHHHHHHHHHHHHHHhc---cccceeecccCCCCCCCCCCCCCcCcHHHHHHHHHHHHHHHHHHHHHH-hchhhcccC
Confidence 9999999999999999995 6999999996 589999999999999999999999999999777665 445789999
Q ss_pred cchhhhHhhhhhHHHHHHHHHHHHHHHhhhCceeCHHHHHHHHHhhhhHHH------hhcccccHHHHHHH----HHHHH
Q 014483 319 VFKPMIASGLLHSLRLLGDASASFEKNCVRGIQANRERISKLLHESLMLVT------SLNPKIGYDNAAAV----AKKAH 388 (423)
Q Consensus 319 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~l~v~~~rm~~~l~~~~~~~~------~la~~~g~~~a~~~----~~~a~ 388 (423)
...|...|..++.+..+...++.++..++++++||++||++++..++++.+ .|++.+||++||++ ++.+.
T Consensus 310 ~~~~~~~~~~l~~~~~~~~~~l~~~~~~l~~l~v~~~rm~~~~~~~~~~~~ae~l~~~l~~~i~~~~Ah~~v~~~~~~a~ 389 (437)
T cd01597 310 AGAWHAEWIALPEIFLLASGALEQAEFLLSGLEVNEDRMRANLDLTGGLILSEAVMMALAPKLGRQEAHDLVYEACMRAV 389 (437)
T ss_pred CchhHHHHHHHHHHHHHHHHHHHHHHHHHcCCEECHHHHHHHHHhccChHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHH
Confidence 888887788887766666666667789999999999999999987766543 56777999999976 56788
Q ss_pred HcCCCHHHHHHHc----CCCCHHHHhhccCcccccCCC
Q 014483 389 KEGTTLKDAALKL----GVLNSEEFDNLVVPEKMIGPS 422 (423)
Q Consensus 389 ~~g~~l~e~~~~~----~~l~~~~l~~~~dp~~~~g~~ 422 (423)
++|+++++++.++ +.++++++++++||.+|+|+.
T Consensus 390 ~~g~~~~~~~~~~~~~~~~l~~~~l~~~ldp~~~v~~a 427 (437)
T cd01597 390 EEGRPLREVLLEDPEVAAYLSDEELDALLDPANYLGSA 427 (437)
T ss_pred HhCCCHHHHHHhChhhhccCCHHHHHHhcCHHHHhcch
Confidence 8999999998876 578899999999999999853
No 21
>PRK08470 adenylosuccinate lyase; Provisional
Probab=100.00 E-value=8.6e-77 Score=606.97 Aligned_cols=387 Identities=20% Similarity=0.220 Sum_probs=328.8
Q ss_pred CHHHHHHHHHHHHHHHHHHHHcC-CCHHHHHHHHHHHH-HHHccccCCCCcccccccCcccccccchHHHHHHHHHHHhC
Q 014483 2 PEPIVRAFGILKKCAAKVNMEYG-LDPAIGKAIMQAAQ-EVAEGKLNDHFPLVVWQTGSGTQSNMNANEVIANRAAEILG 79 (423)
Q Consensus 2 ~~~~~~~~~~ve~A~a~a~~~~g-ip~~~a~~I~~a~~-~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ie~~l~~~~g 79 (423)
+++++++|++||.||+.+|++.| ||+++++.|.+++. ++.+ +.......+ .++..+ +..+.+.+|
T Consensus 16 ~~~~~~~~l~ve~A~a~al~~~G~Ip~~~a~~I~~~~~~d~~~--------~~~~~~~~~----~dv~~~-v~~L~e~~g 82 (442)
T PRK08470 16 MQAKYDAWLEVEKAAVKAWNKLGLIPDSDCEKICKNAKFDIAR--------IDEIEKTTK----HDLIAF-LTSVSESLG 82 (442)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHhcccchHH--------HHHHHHccC----CChHHH-HHHHHHHcc
Confidence 57999999999999999999999 99999999999884 1210 000000111 223333 356788888
Q ss_pred ccCCCcccccccccCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcceecccCCCCCcCCChhHH
Q 014483 80 HKRGEKIVHPNDHVNRSQSSNDTFPTVMHIAAAMETNSRLIPNLKVLHNSLHSKSVEFKDIVKIGRTHTQDATPLTLGQE 159 (423)
Q Consensus 80 ~~~g~~~~h~~~~v~~g~S~nDi~~Ta~~l~~~~~~~~~l~~~l~~l~~~L~~~A~~~~~~~m~grTh~Q~A~P~T~G~~ 159 (423)
+.|+| +|+ |+|||||+||+++|++++. +..+.+.|..++++|.++|++|+||+||||||+|||||||||||
T Consensus 83 -~~~~~-vH~------G~TsnDi~dTa~~L~lr~~-l~~l~~~l~~l~~~L~~lA~~~~~t~m~grTH~Q~A~P~TfG~~ 153 (442)
T PRK08470 83 -EESRF-VHY------GMTSSDCIDTAVALQMRDS-LKLIIEDVKNLMEAIKKRALEHKDTLMVGRSHGIHGEPITFGLV 153 (442)
T ss_pred -ccccc-eec------CCChhchHhHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHhCCCeeecccCCCcCeehhHHHH
Confidence 45777 774 9999999999999988654 68999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhhhcccccccccCCCCCCCcchHHHHHHHHHHcCCCCCcCCchhHHhhhchHHHHHHHH
Q 014483 160 FSGYTTQVKYGIDRVICCLPRMYQLAQGGTAVGTGLNTKKGFDVKIASAVAEETSLPFVTAENKFEALAAHDAFVETSGA 239 (423)
Q Consensus 160 ~a~~~~~l~r~~~rL~~~~~r~~~~~lGg~A~Gt~~~~~~~~~~~~~~~la~~LGl~~~~~~n~~da~~~rd~~~e~~~~ 239 (423)
+++|+++|.|+++||.+++++++.+|||| |+||+.+.+ ..+++++++.|||+.++++|+ +++||+++|++++
T Consensus 154 ~a~~~~~l~r~~~RL~~~~~~~~~~~lgG-AvGt~a~~~----~~v~~~~a~~LGl~~~~~~~~---v~~RD~~~e~~~~ 225 (442)
T PRK08470 154 LAIWYDEIKRHLKALEHTMEVISVGKISG-AMGNFAHAP----LELEELVCEELGLKPAPVSNQ---VIQRDRYARLASA 225 (442)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhcCcc-hhcccccCC----hHHHHHHHHHcCCCCCCCCCC---ccCcHHHHHHHHH
Confidence 99999999999999999999999999977 999976553 567889999999997677774 6999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCCcceeEecC--CCCCCCCCCCCCCChhHHHHHHHHHHHhhhhhHHHhhhhcCccccc
Q 014483 240 LNTVAASLMKIANDVRLLGSGPRCGLGELILP--ENEPGSSIMPGKVNPTQCEALTMVCAQVIGNHVAITVGGSNGHFEL 317 (423)
Q Consensus 240 l~~~~~~L~ria~Dl~~~~s~~r~e~gev~~~--~~~~gSS~MPqKrNP~~~E~i~~~a~~~~g~~~~~~~~~~~~~~e~ 317 (423)
|++++++|+|||+||++|+ ++||+|+.++ ++++|||||||||||+.+|+++++++.+.|....++. ....++++
T Consensus 226 La~~a~~L~ria~Di~~l~---~~E~~ev~e~~~~g~~GSS~MPhKrNPv~~E~i~~~a~~~~~~~~~~~~-~~~~~~eR 301 (442)
T PRK08470 226 LALLASSCEKIAVAIRHLQ---RTEVYEAEEYFSKGQKGSSAMPHKRNPVLSENITGLCRVIRSFATPALE-NVALWHER 301 (442)
T ss_pred HHHHHHHHHHHHHHHHHHh---ccccceecccCCCCCCCcCCCCCCcCcHHHHHHHHHHHHHHHHHHHHHH-hchHhhcc
Confidence 9999999999999999999 5799999987 3579999999999999999999999999999766655 34567888
Q ss_pred ccchhhhHhhhhhHHHHHHHHHHHHHHHhhhCceeCHHHHHHHHHhhhh--HH----Hhhccc-ccHHHHHHHHH----H
Q 014483 318 NVFKPMIASGLLHSLRLLGDASASFEKNCVRGIQANRERISKLLHESLM--LV----TSLNPK-IGYDNAAAVAK----K 386 (423)
Q Consensus 318 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~l~v~~~rm~~~l~~~~~--~~----~~la~~-~g~~~a~~~~~----~ 386 (423)
+...|..+|..++.+..+...++..+..++++|+||++||++|+..+.+ ++ ..|+++ +||++||++|. +
T Consensus 302 D~~~~~~e~~~l~~~~~~~~~~l~~~~~~l~~l~v~~~rm~~nl~~~~g~~~ae~l~~~L~~~G~~~~~Ah~~V~~~~~~ 381 (442)
T PRK08470 302 DISHSSVERFILPDAFITTDFMLHRLNNVIENLVVYPENMMKNLNLTGGLVFSQRVLLELPKKGVSREDAYKIVQRNAMK 381 (442)
T ss_pred CCchhHHHhhhHHHHHHHHHHHHHHHHHHHccCEECHHHHHHHHHhccChHHHHHHHHHHHHcCCCHHHHHHHHHHHHHH
Confidence 8888888888888888888888888889999999999999999987443 33 345665 88999997664 5
Q ss_pred HHHc---CCC---------HHHHHHHc----CCCCHHHHhhccCcccccCCC
Q 014483 387 AHKE---GTT---------LKDAALKL----GVLNSEEFDNLVVPEKMIGPS 422 (423)
Q Consensus 387 a~~~---g~~---------l~e~~~~~----~~l~~~~l~~~~dp~~~~g~~ 422 (423)
+.++ |.+ |.|.+.++ +.+++++|+++|||.+|+|..
T Consensus 382 a~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~l~~~~dp~~~~g~~ 433 (442)
T PRK08470 382 VWEDLQQGKAAINEKGESLFLQALLNDEDLRKSLSEEEIRACFDYSYYTKNV 433 (442)
T ss_pred HHHHhhcCCCccccccHHHHHHHHhcCHHhHhcCCHHHHHHHhCHHHHHhhH
Confidence 5567 999 99988875 488999999999999999963
No 22
>cd01359 Argininosuccinate_lyase Argininosuccinate lyase (argininosuccinase, ASAL). This group contains ASAL and related proteins. It is a member of the Lyase class I family. Members of this family for the most part catalyze similar beta-elimination reactions in which a C-N or C-O bond is cleaved with the release of fumarate as one of the products. These proteins are active as tetramers. The four active sites of the homotetrameric enzyme are each formed by residues from three different subunits. ASAL is a cytosolic enzyme which catalyzes the reversible breakdown of argininosuccinate to arginine and fumarate during arginine biosynthesis. In ureotelic species ASAL also catalyzes a reaction involved in the production of urea. Included in this group are the major soluble avian eye lens proteins from duck, delta 1 and delta 2 crystallin. Of these two isoforms only delta 2 has retained ASAL activity. These crystallins may have evolved by, gene recruitment of ASAL followed by gene duplication.
Probab=100.00 E-value=2.7e-76 Score=605.19 Aligned_cols=389 Identities=22% Similarity=0.271 Sum_probs=330.9
Q ss_pred CHHHHHHHHHHHHHHHHHHHHcC-CCHHHHHHHHHHHHHHHccccCCCCcccccccCcccccccchHHHHHHHHHHHhCc
Q 014483 2 PEPIVRAFGILKKCAAKVNMEYG-LDPAIGKAIMQAAQEVAEGKLNDHFPLVVWQTGSGTQSNMNANEVIANRAAEILGH 80 (423)
Q Consensus 2 ~~~~~~~~~~ve~A~a~a~~~~g-ip~~~a~~I~~a~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ie~~l~~~~g~ 80 (423)
+++++++|+.||.||+.+|.+.| ||++++++|.++|+++.++...+.|+.++ ..++.+++ ++.++++++|
T Consensus 5 d~~~~~~~~~ve~A~a~al~~~Gii~~~~a~~I~~al~~~~~~~~~~~~~~~~----~~~~~~~~----~e~~l~~~~g- 75 (435)
T cd01359 5 DRRLFEEDIAGSIAHAVMLAEQGILTEEEAAKILAGLAKIRAEIEAGAFELDP----EDEDIHMA----IERRLIERIG- 75 (435)
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHhhcccCCccCCC----CCCcHHHH----HHHHHHHHHH-
Confidence 57899999999999999999999 99999999999999987543345666654 24555666 5666778887
Q ss_pred cCCCcccccccccCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcceecccCCCCCcCCChhHHH
Q 014483 81 KRGEKIVHPNDHVNRSQSSNDTFPTVMHIAAAMETNSRLIPNLKVLHNSLHSKSVEFKDIVKIGRTHTQDATPLTLGQEF 160 (423)
Q Consensus 81 ~~g~~~~h~~~~v~~g~S~nDi~~Ta~~l~~~~~~~~~l~~~l~~l~~~L~~~A~~~~~~~m~grTh~Q~A~P~T~G~~~ 160 (423)
+.|+| +| +|+||||+++|+++|++++. +..+.+.|..|+++|.++|++|+||+||||||+|||||||||||+
T Consensus 76 ~~~~~-iH------~G~SsnDi~~Ta~~L~lr~~-l~~l~~~l~~l~~~L~~~A~~~~~t~m~grTh~Q~A~P~T~G~~~ 147 (435)
T cd01359 76 DVGGK-LH------TGRSRNDQVATDLRLYLRDA-LLELLELLLDLQRALLDRAEEHADTIMPGYTHLQRAQPITFGHYL 147 (435)
T ss_pred HHHhh-hh------ccCCHHhHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHcCCCEecCCCCCccceeccHHHHH
Confidence 66777 88 59999999999999998665 679999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhhcccccccc-cCCCCCCCcchHHHHHHHHHHcCCCCCcCCchhHHhhhchHHHHHHHH
Q 014483 161 SGYTTQVKYGIDRVICCLPRMYQLAQGGTAV-GTGLNTKKGFDVKIASAVAEETSLPFVTAENKFEALAAHDAFVETSGA 239 (423)
Q Consensus 161 a~~~~~l~r~~~rL~~~~~r~~~~~lGg~A~-Gt~~~~~~~~~~~~~~~la~~LGl~~~~~~n~~da~~~rd~~~e~~~~ 239 (423)
++|+++|.|+++||.+++++++.+||||++. ||+++.++ ++++++|||+. +..|.++++++||++++++++
T Consensus 148 ~~~~~~l~r~~~rL~~~~~~~~~~~lGgaag~gt~~~~~~-------~~~a~~LG~~~-~~~~~~~a~~~rd~~~e~~~~ 219 (435)
T cd01359 148 LAYAEMLERDLERLADAYKRVNVSPLGAGALAGTTFPIDR-------ERTAELLGFDG-PTENSLDAVSDRDFVLEFLSA 219 (435)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCcCCcccccccCCCCCCCH-------HHHHHHcCCCC-CccCHHHHHhcchHHHHHHHH
Confidence 9999999999999999999999999999665 77777665 47999999996 678878889999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCCcceeEecCCC-CCCCCCCCCCCChhHHHHHHHHHHHhhhhhHHHhhhhcC--cccc
Q 014483 240 LNTVAASLMKIANDVRLLGSGPRCGLGELILPEN-EPGSSIMPGKVNPTQCEALTMVCAQVIGNHVAITVGGSN--GHFE 316 (423)
Q Consensus 240 l~~~~~~L~ria~Dl~~~~s~~r~e~gev~~~~~-~~gSS~MPqKrNP~~~E~i~~~a~~~~g~~~~~~~~~~~--~~~e 316 (423)
++.++++|+|||+|+++|++ +||||+.+|+. ++|||||||||||+.+|+++++++++.|++.+++....+ .+++
T Consensus 220 l~~~a~~l~ria~Dl~l~~~---~e~gev~lpe~~~~GSS~MP~KrNP~~~E~i~~~a~~~~g~~~~~~~~~~~~~~~~~ 296 (435)
T cd01359 220 AALLMVHLSRLAEDLILWST---QEFGFVELPDAYSTGSSIMPQKKNPDVLELIRGKAGRVIGALAGLLTTLKGLPLAYN 296 (435)
T ss_pred HHHHHHHHHHHHHHHHHHcC---CCCCeeeCCCCCCCccccCCCCCCCcHHHHHHHHHHHHhhHHhHHHHHhcCCCCccc
Confidence 99999999999999999996 57999999986 589999999999999999999999999999998876533 2334
Q ss_pred cccchhhhHhhhhh-HHHHHHHHHHHHHHHhhhCceeCHHHHHHHHHhhhhHHHhhc----c--cccHHHHHH----HHH
Q 014483 317 LNVFKPMIASGLLH-SLRLLGDASASFEKNCVRGIQANRERISKLLHESLMLVTSLN----P--KIGYDNAAA----VAK 385 (423)
Q Consensus 317 ~~~~~~~~~~~~l~-~~~~~~~~~~~~~~~~l~~l~v~~~rm~~~l~~~~~~~~~la----~--~~g~~~a~~----~~~ 385 (423)
++... .|..++ .+..+..++..+ ..++++|+||+++|++|+..++.++++++ + .+||++||+ +++
T Consensus 297 ~d~~~---~~~~l~~~~~~~~~al~~~-~~~l~~l~v~~~~m~~~l~~~~~~a~~l~~~l~~~~g~~~r~Ah~~v~~~~~ 372 (435)
T cd01359 297 KDLQE---DKEPLFDAVDTLIASLRLL-TGVISTLTVNPERMREAAEAGFSTATDLADYLVREKGVPFREAHHIVGRAVR 372 (435)
T ss_pred hhHHH---hhHHHHHHHHHHHHHHHHH-HHHHhhCEECHHHHHHHHhcCccHHHHHHHHHHHhcCCCHHHHHHHHHHHHH
Confidence 33222 233444 445555555555 57999999999999999998888777654 3 378888886 455
Q ss_pred HHHHcCCCHHHHHHHc----CCCCHHHHhhccCcccccCCC
Q 014483 386 KAHKEGTTLKDAALKL----GVLNSEEFDNLVVPEKMIGPS 422 (423)
Q Consensus 386 ~a~~~g~~l~e~~~~~----~~l~~~~l~~~~dp~~~~g~~ 422 (423)
.+.++|+++.|++.++ +.+++++++.++||.+|+|.+
T Consensus 373 ~a~~~g~~~~~~~~~~~~~~~~l~~~~l~~~ldp~~~~~~r 413 (435)
T cd01359 373 LAEEKGKDLSDLTLAELQAISPLFEEDVREALDPENSVERR 413 (435)
T ss_pred HHHHcCCChhhcCHHHHHhhcccCHHHHHHhCCHHHHHHhc
Confidence 7778999999987765 688999999999999999865
No 23
>PRK00855 argininosuccinate lyase; Provisional
Probab=100.00 E-value=7.1e-76 Score=604.30 Aligned_cols=391 Identities=22% Similarity=0.289 Sum_probs=339.6
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHcC-CCHHHHHHHHHHHHHHHccccCCCCcccccccCcccccccchHHHHHHHHHHHhC
Q 014483 1 MPEPIVRAFGILKKCAAKVNMEYG-LDPAIGKAIMQAAQEVAEGKLNDHFPLVVWQTGSGTQSNMNANEVIANRAAEILG 79 (423)
Q Consensus 1 ~~~~~~~~~~~ve~A~a~a~~~~g-ip~~~a~~I~~a~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ie~~l~~~~g 79 (423)
++++++++++.+++||+.++.+.| ||++++++|.++|+++.++...+.|++++ +++|+|++ ||+++++++|
T Consensus 28 ~~~~~~~~~~~~~~Aha~~l~~~G~l~~~~a~~i~~al~~i~~~~~~~~~~~~~----~~~d~~~~----ie~~l~~~~g 99 (459)
T PRK00855 28 FDKRLAEEDIAGSIAHARMLAKQGILSEEEAEKILAGLDEILEEIEAGKFEFSP----ELEDIHMA----IEARLTERIG 99 (459)
T ss_pred chHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHhhcccCCcccCC----CCCcHHHH----HHHHHHHHhc
Confidence 468899999999999999999999 99999999999999998766667888875 46777776 8999999999
Q ss_pred ccCCCcccccccccCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcceecccCCCCCcCCChhHH
Q 014483 80 HKRGEKIVHPNDHVNRSQSSNDTFPTVMHIAAAMETNSRLIPNLKVLHNSLHSKSVEFKDIVKIGRTHTQDATPLTLGQE 159 (423)
Q Consensus 80 ~~~g~~~~h~~~~v~~g~S~nDi~~Ta~~l~~~~~~~~~l~~~l~~l~~~L~~~A~~~~~~~m~grTh~Q~A~P~T~G~~ 159 (423)
+.|+| +| +|+||||+++|+++|++++. +..+.+.|..|+++|.++|++|++|+||||||+|||||||||||
T Consensus 100 -~~g~~-iH------~g~SrnD~~~Ta~~L~~r~~-l~~l~~~L~~l~~~L~~~A~~~~~t~m~GrTH~Q~A~P~T~G~~ 170 (459)
T PRK00855 100 -DVGGK-LH------TGRSRNDQVATDLRLYLRDE-IDEIAELLLELQKALLDLAEEHADTIMPGYTHLQRAQPVTFGHH 170 (459)
T ss_pred -cccCc-cc------CCCCHhhHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHcCCCEeecCcCCccceeecHHHH
Confidence 67777 88 49999999999999998765 57999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhhhcccccccc-cCCCCCCCcchHHHHHHHHHHcCCCCCcCCchhHHhhhchHHHHHHH
Q 014483 160 FSGYTTQVKYGIDRVICCLPRMYQLAQGGTAV-GTGLNTKKGFDVKIASAVAEETSLPFVTAENKFEALAAHDAFVETSG 238 (423)
Q Consensus 160 ~a~~~~~l~r~~~rL~~~~~r~~~~~lGg~A~-Gt~~~~~~~~~~~~~~~la~~LGl~~~~~~n~~da~~~rd~~~e~~~ 238 (423)
+++|+++|.|+++||.+++++++.+||||+++ ||+++.++. +++++|||+. +..|++||+++||+++++++
T Consensus 171 l~~~~~~L~r~~~rL~~~~~~~~~~plGgaag~gt~~~~~r~-------~~a~~LG~~~-~~~n~~~a~~~rd~~~e~~~ 242 (459)
T PRK00855 171 LLAYAEMLARDLERLRDARKRVNRSPLGSAALAGTTFPIDRE-------RTAELLGFDG-VTENSLDAVSDRDFALEFLS 242 (459)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcCcchhhhcCCCCCcCHH-------HHHHHcCCCC-CCCCHHHHHHccHHHHHHHH
Confidence 99999999999999999999999999999887 888887774 6999999997 78999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCcceeEecCCC-CCCCCCCCCCCChhHHHHHHHHHHHhhhhhHHHhhhhcCc--cc
Q 014483 239 ALNTVAASLMKIANDVRLLGSGPRCGLGELILPEN-EPGSSIMPGKVNPTQCEALTMVCAQVIGNHVAITVGGSNG--HF 315 (423)
Q Consensus 239 ~l~~~~~~L~ria~Dl~~~~s~~r~e~gev~~~~~-~~gSS~MPqKrNP~~~E~i~~~a~~~~g~~~~~~~~~~~~--~~ 315 (423)
+++.++++|+|||+|+++|+| +||||+.+|+. ++|||||||||||+.+|.++++|+++.|++.+++....+. .+
T Consensus 243 ~l~~la~~L~ria~Dl~l~ss---~e~gei~~p~~~~~gSSiMPqK~NP~~~E~i~~~a~~~~g~~~~~~~~~~~~~~~~ 319 (459)
T PRK00855 243 AASLLMVHLSRLAEELILWSS---QEFGFVELPDAFSTGSSIMPQKKNPDVAELIRGKTGRVYGNLTGLLTVMKGLPLAY 319 (459)
T ss_pred HHHHHHHHHHHHHHHHHHHhC---cCCCeEeCCCCCCCCcCCCCCCCCCHHHHHHHHHHHHHHhhHHHHHHHhcCchHHh
Confidence 999999999999999999997 48999999976 6999999999999999999999999999999888643332 24
Q ss_pred ccccchhhhHhhhhhHHHHHHHHHHHHHHHhhhCceeCHHHHHHHHHhhhhHHHhhccc-----ccHHHHHH----HHHH
Q 014483 316 ELNVFKPMIASGLLHSLRLLGDASASFEKNCVRGIQANRERISKLLHESLMLVTSLNPK-----IGYDNAAA----VAKK 386 (423)
Q Consensus 316 e~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~l~v~~~rm~~~l~~~~~~~~~la~~-----~g~~~a~~----~~~~ 386 (423)
+++.... ...+++++..+.+++..+. .++++|+||+++|++++..++.+++++++. +||++||+ +++.
T Consensus 320 ~rD~~~~--~~~l~~~~~~~~~al~~~~-~~l~~l~v~~~~m~~~l~~~~~~at~la~~Lv~~gi~~r~Ah~~v~~~~~~ 396 (459)
T PRK00855 320 NRDLQED--KEPLFDAVDTLKLSLEAMA-GMLETLTVNKERMREAAGKGFSTATDLADYLVRKGVPFREAHEIVGKAVRE 396 (459)
T ss_pred hhhhhhh--HHHHHHHHHHHHHHHHHHH-HHHccCEECHHHHHHHHHcchhHHHHHHHHHHHcCCCHHHHHHHHHHHHHH
Confidence 4433221 1235566666766766665 699999999999999999999888877653 57777775 5667
Q ss_pred HHHcCCCHHHHHHHc----CCCCHHHHhhccCcccccCCC
Q 014483 387 AHKEGTTLKDAALKL----GVLNSEEFDNLVVPEKMIGPS 422 (423)
Q Consensus 387 a~~~g~~l~e~~~~~----~~l~~~~l~~~~dp~~~~g~~ 422 (423)
+.++|+++.+++.+. ..+.++++..++||..+|..+
T Consensus 397 a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r 436 (459)
T PRK00855 397 AEERGVDLADLSLEELQAFSPLITEDVYEVLTPEGSVAAR 436 (459)
T ss_pred HHHhCCCHHHHhHHHHHHhcccchHHHHHHhChHHHHHhc
Confidence 888999999987654 345577798999999988755
No 24
>PRK07380 adenylosuccinate lyase; Provisional
Probab=100.00 E-value=6.5e-76 Score=597.65 Aligned_cols=388 Identities=19% Similarity=0.217 Sum_probs=327.5
Q ss_pred CHHHHHHHHHHHHHHHHHHHHcC-CCHHHHHHHHHHHHHHHccccCCCCcccccccCcccccccchHHHHHHHHHHHhCc
Q 014483 2 PEPIVRAFGILKKCAAKVNMEYG-LDPAIGKAIMQAAQEVAEGKLNDHFPLVVWQTGSGTQSNMNANEVIANRAAEILGH 80 (423)
Q Consensus 2 ~~~~~~~~~~ve~A~a~a~~~~g-ip~~~a~~I~~a~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ie~~l~~~~g~ 80 (423)
+++++++|++||.|++.+|++.| ||++++++|.++++ + ++..+.+... ....++..++ +.+.+.+|
T Consensus 16 ~~~~~~~~l~vE~ala~a~~~~g~ip~~aa~~i~~~~~-~---------d~~~i~~~~~-~~~h~v~a~v-~~l~~~~g- 82 (431)
T PRK07380 16 DTAKFQTWLDVEIAVCEAQAELGKIPQEAVEEIKAKAN-F---------DPQRILEIEA-EVRHDVIAFL-TNVNEYVG- 82 (431)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhccC-C---------CHHHHHHHHH-HhCCChHHHH-HHHHHHHH-
Confidence 57899999999999999999999 99999999987642 1 1111111100 0112232333 45678887
Q ss_pred cCCCcccccccccCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcceecccCCCCCcCCChhHHH
Q 014483 81 KRGEKIVHPNDHVNRSQSSNDTFPTVMHIAAAMETNSRLIPNLKVLHNSLHSKSVEFKDIVKIGRTHTQDATPLTLGQEF 160 (423)
Q Consensus 81 ~~g~~~~h~~~~v~~g~S~nDi~~Ta~~l~~~~~~~~~l~~~l~~l~~~L~~~A~~~~~~~m~grTh~Q~A~P~T~G~~~ 160 (423)
+.|+| +|+ |+|||||+||+++|++++ .+..+.+.|..++++|.++|++|+||+||||||+|||+|||||||+
T Consensus 83 ~~~~~-vH~------G~Ts~Di~dTa~~L~lr~-~l~~l~~~l~~l~~~L~~lA~~~~~t~m~grTH~Q~A~P~TfG~~~ 154 (431)
T PRK07380 83 DAGRY-IHL------GMTSSDVLDTGLALQLVA-SLDLLLEELEDLIQAIRYQAREHRNTVMIGRSHGIHAEPITFGFKL 154 (431)
T ss_pred Hhhcc-ccC------CCChhhhHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHcCCCeeechhcCccceechHHHHH
Confidence 67777 885 999999999999998865 5689999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhhcccccccccCCCCCCCcchHHHHHHHHHHcCCCCCcCCchhHHhhhchHHHHHHHHH
Q 014483 161 SGYTTQVKYGIDRVICCLPRMYQLAQGGTAVGTGLNTKKGFDVKIASAVAEETSLPFVTAENKFEALAAHDAFVETSGAL 240 (423)
Q Consensus 161 a~~~~~l~r~~~rL~~~~~r~~~~~lGg~A~Gt~~~~~~~~~~~~~~~la~~LGl~~~~~~n~~da~~~rd~~~e~~~~l 240 (423)
++|+++|.|+++||..++++++.+|||| |+||++++++ ++++.+++.|||+.++.+| ++++||+++++++++
T Consensus 155 a~~~~~l~r~~~RL~~~~~~~~~~~l~G-AvGt~~~~~~----~~~~~~a~~LGl~~~~~~~---~v~~rd~~~e~~~~l 226 (431)
T PRK07380 155 AGWLAETLRNRERLVRLREDIAVGQISG-AVGTYANTDP----RVEAITCQKLGLKPDTAST---QVISRDRHAEYVQTL 226 (431)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccCcch-hhcCcccCCh----hHHHHHHHHcCCCCCCCCC---CccCcHHHHHHHHHH
Confidence 9999999999999999999999999976 8999888764 5677899999999865443 469999999999999
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCcceeEecC--CCCCCCCCCCCCCChhHHHHHHHHHHHhhhhhHHHhhhhcCcccccc
Q 014483 241 NTVAASLMKIANDVRLLGSGPRCGLGELILP--ENEPGSSIMPGKVNPTQCEALTMVCAQVIGNHVAITVGGSNGHFELN 318 (423)
Q Consensus 241 ~~~~~~L~ria~Dl~~~~s~~r~e~gev~~~--~~~~gSS~MPqKrNP~~~E~i~~~a~~~~g~~~~~~~~~~~~~~e~~ 318 (423)
++++++|+|||+|+++|+ ++||+|+.++ .+++|||+|||||||+.+|+++++|+.+.|.+.+++. ....+++++
T Consensus 227 a~~a~~L~kia~Di~~l~---~~~~~el~e~~~~g~~GSS~MPhKrNP~~~E~i~~~a~~~~g~~~~~~~-~~~~~~eRD 302 (431)
T PRK07380 227 ALVGASLERFATEIRNLQ---RTDVLEVEEYFAKGQKGSSAMPHKRNPIRSERLSGLARVLRSYAVAALE-NVALWHERD 302 (431)
T ss_pred HHHHHHHHHHHHHHHHhc---ccCceeecccCCCCCCCCcCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH-hchhhhccC
Confidence 999999999999999999 5799999876 3578999999999999999999999999999887655 344677888
Q ss_pred cchhhhHhhhhhHHHHHHHHHHHHHHHhhhCceeCHHHHHHHHHhhhh--HH----Hhhccc-ccHHHHHHHH----HHH
Q 014483 319 VFKPMIASGLLHSLRLLGDASASFEKNCVRGIQANRERISKLLHESLM--LV----TSLNPK-IGYDNAAAVA----KKA 387 (423)
Q Consensus 319 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~l~v~~~rm~~~l~~~~~--~~----~~la~~-~g~~~a~~~~----~~a 387 (423)
...|..+|..++.+..+...++..+..++++|+||++||++|+..+.+ ++ ..|+++ +||++||++| .++
T Consensus 303 ~~~~~~e~~~l~~~~~~~~~~l~~~~~~l~~L~v~~~rm~~nl~~~~g~~~ae~~~~~Lv~~gl~r~~Ah~~V~~~~~~a 382 (431)
T PRK07380 303 ISHSSVERVMLPDCSILLHFMLREMTDLVKNLLVYPENMRRNMNIYGGVVFSQRVLLALVEKGMSREEAYRLVQKNAHTA 382 (431)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHccCEECHHHHHHHHHhcCChHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHH
Confidence 877888899999998888888887789999999999999999974333 33 346665 8999998655 577
Q ss_pred HH-cCCCHHHHHHHc----CCCCHHHHhhccCcccccCCC
Q 014483 388 HK-EGTTLKDAALKL----GVLNSEEFDNLVVPEKMIGPS 422 (423)
Q Consensus 388 ~~-~g~~l~e~~~~~----~~l~~~~l~~~~dp~~~~g~~ 422 (423)
.+ +|.+|.|++.++ ..++++||++++||.+|+|..
T Consensus 383 ~~~~~~~l~e~l~~~~~~~~~l~~~~l~~~~dp~~ylg~~ 422 (431)
T PRK07380 383 WNTEGGNFRANLEADPEVTQLLSAAELADCFDPQLHLKNL 422 (431)
T ss_pred HHHhCCCHHHHHHcChHhhhcCCHHHHHHhhCHHHHhcch
Confidence 77 899999999986 378999999999999999964
No 25
>TIGR00928 purB adenylosuccinate lyase. This family consists of adenylosuccinate lyase, the enzyme that catalyzes step 8 in the purine biosynthesis pathway for de novo synthesis of IMP and also the final reaction in the two-step sequence from IMP to AMP.
Probab=100.00 E-value=2.6e-76 Score=604.63 Aligned_cols=390 Identities=25% Similarity=0.283 Sum_probs=337.7
Q ss_pred CHHHHHHHHHHHHHHHHHHHHcC-CCHHHHHHHHHHHHHHHccccCCCCccccc---ccCcccccccchHHHHHHHHHHH
Q 014483 2 PEPIVRAFGILKKCAAKVNMEYG-LDPAIGKAIMQAAQEVAEGKLNDHFPLVVW---QTGSGTQSNMNANEVIANRAAEI 77 (423)
Q Consensus 2 ~~~~~~~~~~ve~A~a~a~~~~g-ip~~~a~~I~~a~~~i~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~ie~~l~~~ 77 (423)
+++++++|++||.||+.+|++.| ||+++++.|.+++ ++. .++++.+ ....+.+ + ..+++++++.
T Consensus 16 ~~~~~~~~l~ve~A~a~~l~~~giip~~~a~~i~~~~-~~~------~~d~~~l~~~~~~~~~~----v-~~~e~~l~~~ 83 (435)
T TIGR00928 16 EENKFKTWLDVEVALLRALAELGVIPAEAVKEIRAKA-NFT------DVDLARIKEIEAVTRHD----V-KAVVYALKEK 83 (435)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhhC-CCC------ccCHHHHHHHHHHHCcC----h-HHHHHHHHHH
Confidence 57899999999999999999999 9999999998873 211 0111111 0001111 2 2377888999
Q ss_pred hCccCCCcccccccccCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcceecccCCCCCcCCChh
Q 014483 78 LGHKRGEKIVHPNDHVNRSQSSNDTFPTVMHIAAAMETNSRLIPNLKVLHNSLHSKSVEFKDIVKIGRTHTQDATPLTLG 157 (423)
Q Consensus 78 ~g~~~g~~~~h~~~~v~~g~S~nDi~~Ta~~l~~~~~~~~~l~~~l~~l~~~L~~~A~~~~~~~m~grTh~Q~A~P~T~G 157 (423)
+| +.|+| +| +|+||||+++|+++|++++. +..+.+.|..++++|.++|++|+||+||||||+|||||||||
T Consensus 84 ~g-~~~~~-vh------~g~SsnD~~~Ta~~l~lr~~-l~~l~~~l~~l~~~L~~~A~~~~~t~m~grTH~Q~A~P~T~G 154 (435)
T TIGR00928 84 CG-AEGEF-IH------FGATSNDIVDTALALLLRDA-LEIILPKLKQLIDRLKDLAVEYKDTVMLGRTHGQHAEPTTLG 154 (435)
T ss_pred hh-hhhhh-ee------ecccHHHHHHhHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHccchHhHHhcCCCCcchhHH
Confidence 98 66777 77 49999999999999998765 679999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhhcccccccccCCCCCCCcchHHHHHHHHHHcCCCCCcCCchhHHhhhchHHHHHH
Q 014483 158 QEFSGYTTQVKYGIDRVICCLPRMYQLAQGGTAVGTGLNTKKGFDVKIASAVAEETSLPFVTAENKFEALAAHDAFVETS 237 (423)
Q Consensus 158 ~~~a~~~~~l~r~~~rL~~~~~r~~~~~lGg~A~Gt~~~~~~~~~~~~~~~la~~LGl~~~~~~n~~da~~~rd~~~e~~ 237 (423)
||+++|+++|.|+++||.+++++++.+|+|| |+||++++++.+ ..+++++++.|||+.++.+| ++++||++++++
T Consensus 155 ~~~~~~~~~l~r~~~rL~~~~~~~~~~~lgG-a~Gt~~~~~~~~-~~~~~~~a~~LGl~~~~~~~---~~~~rD~~~e~~ 229 (435)
T TIGR00928 155 KKFALWADEMKRQLERLLQAKERIKVGGISG-AVGTHAAAYPLV-EEVEERVTEFLGLKPVPIST---QIEPRDRHAELL 229 (435)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhHhhcccc-hhhhHhhccccH-HHHHHHHHHhcCCCCCCCCc---cccccHHHHHHH
Confidence 9999999999999999999999999999988 899999998876 78889999999999865333 679999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCCcceeEecCC--CCCCCCCCCCCCChhHHHHHHHHHHHhhhhhHHHhhhhcCccc
Q 014483 238 GALNTVAASLMKIANDVRLLGSGPRCGLGELILPE--NEPGSSIMPGKVNPTQCEALTMVCAQVIGNHVAITVGGSNGHF 315 (423)
Q Consensus 238 ~~l~~~~~~L~ria~Dl~~~~s~~r~e~gev~~~~--~~~gSS~MPqKrNP~~~E~i~~~a~~~~g~~~~~~~~~~~~~~ 315 (423)
++++.++++|+|||+||++|++ +||+|+.+|. +++|||||||||||+.+|+++++++++.|+.+.++. ...+++
T Consensus 230 ~~l~~la~~L~ria~Dl~l~s~---~~~~el~~~~~~~~~GSS~MP~K~NP~~~E~i~~~a~~~~g~~~~~~~-~~~~~~ 305 (435)
T TIGR00928 230 DALALLATTLEKFAVDIRLLQR---TEHFEVEEPFGKGQVGSSAMPHKRNPIDFENVCGLARVIRSVLSPALE-NVPLWH 305 (435)
T ss_pred HHHHHHHHHHHHHHHHHHHHHh---ccccceecccCCCCCCcCCCCcCcCcHHHHHHHHHHHHHHHHHHHHHH-HhhHHh
Confidence 9999999999999999999995 6899999885 379999999999999999999999999999877765 346788
Q ss_pred ccccchhhhHhhhhhHHHHHHHHHHHHHHHhhhCceeCHHHHHHHHHhhhhHHH--h----hcc-cccHHHHHH----HH
Q 014483 316 ELNVFKPMIASGLLHSLRLLGDASASFEKNCVRGIQANRERISKLLHESLMLVT--S----LNP-KIGYDNAAA----VA 384 (423)
Q Consensus 316 e~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~l~v~~~rm~~~l~~~~~~~~--~----la~-~~g~~~a~~----~~ 384 (423)
+++...|..+|..++++..+...++.++..++++|+||++||++|+..++++++ . |++ .+||++||+ ++
T Consensus 306 erd~~~~~~~~~~l~~~~~~~~~~l~~~~~~l~~l~v~~~rm~~~l~~~~~~~~a~~la~~L~~~g~g~~~Ah~~v~~~~ 385 (435)
T TIGR00928 306 ERDLTDSSVERIILPDSFILADIMLKTTLKVVKKLVVNPENILRNLELTLGLIASERVLIALVERGMGREEAYEIVRELA 385 (435)
T ss_pred ccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCEECHHHHHHHHHhccChHhHHHHHHHHHHhCCChhhHHHHHHHHH
Confidence 999888988898889988888888888889999999999999999998887442 3 344 589999998 56
Q ss_pred HHHHH-cCCCHHHHHHHc----CCCCHHHHhhccCcccccCC
Q 014483 385 KKAHK-EGTTLKDAALKL----GVLNSEEFDNLVVPEKMIGP 421 (423)
Q Consensus 385 ~~a~~-~g~~l~e~~~~~----~~l~~~~l~~~~dp~~~~g~ 421 (423)
+.+.+ +|.++++++.++ +.+++++++.++||.+|+|.
T Consensus 386 ~~a~~~~~~~l~~~~~~~~~~~~~l~~~~l~~~ldp~~~~~~ 427 (435)
T TIGR00928 386 MGAAEVDEPDLLEFLLADERITKYLKEEELAELLDPETYIGN 427 (435)
T ss_pred HHHHHcccccHHHHHhhCccchhhcCHHHHHHcCCHHHHhCh
Confidence 67777 999999998876 47899999999999999985
No 26
>PRK08540 adenylosuccinate lyase; Reviewed
Probab=100.00 E-value=4.7e-76 Score=604.50 Aligned_cols=393 Identities=26% Similarity=0.298 Sum_probs=334.0
Q ss_pred CHHHHHHHHHHHHHHHHHHHHcC-CCHHHHHHHHHHHHH--HHccccCCCCcccccccCcccccccchHHHHHHHHHHHh
Q 014483 2 PEPIVRAFGILKKCAAKVNMEYG-LDPAIGKAIMQAAQE--VAEGKLNDHFPLVVWQTGSGTQSNMNANEVIANRAAEIL 78 (423)
Q Consensus 2 ~~~~~~~~~~ve~A~a~a~~~~g-ip~~~a~~I~~a~~~--i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ie~~l~~~~ 78 (423)
+++++++|++||.||+.+|.+.| ||++++++|.++|.+ +...... ... . ..+.++ + .++.++++++
T Consensus 21 ~~~~~~~~l~ve~A~a~~l~~~Giip~~~a~~I~~~l~~~~i~~~~~~-~~~--~---~~~~~v-~----~~e~~L~~~~ 89 (449)
T PRK08540 21 EENKLQKMLDVEAALARAEAELGLIPEEAAEEINRKASTKYVKLERVK-EIE--A---EIHHDI-M----AVVKALSEVC 89 (449)
T ss_pred hHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHhcccccCCHHHHH-HHH--H---HhCCCc-H----HHHHHHHHHh
Confidence 67999999999999999999999 999999999999876 3211000 000 0 011111 2 3678889999
Q ss_pred CccCCCcccccccccCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcceecccCCCCCcCCChhH
Q 014483 79 GHKRGEKIVHPNDHVNRSQSSNDTFPTVMHIAAAMETNSRLIPNLKVLHNSLHSKSVEFKDIVKIGRTHTQDATPLTLGQ 158 (423)
Q Consensus 79 g~~~g~~~~h~~~~v~~g~S~nDi~~Ta~~l~~~~~~~~~l~~~l~~l~~~L~~~A~~~~~~~m~grTh~Q~A~P~T~G~ 158 (423)
|++.|+| +|+ |+|||||++|+++|++++. +..+.+.|..++++|.++|++|+|++||||||+||||||||||
T Consensus 90 ~~~~~~~-vH~------g~S~nDi~~Ta~~L~lr~~-l~~l~~~L~~l~~~L~~~A~~~~~~~m~grTH~Q~A~P~T~G~ 161 (449)
T PRK08540 90 EGDAGEY-VHF------GATSNDIIDTATALQLKDS-LEILEEKLKKLRGVLLKKAEEHKNTVCIGRTHGQHAVPTTYGM 161 (449)
T ss_pred hhhhhcc-eec------CccHhhHHhHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHhcCCchhhhcCCCcCeehhHHH
Confidence 6577887 884 9999999999999988654 6799999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhhhcccccccccCCCCCCCcchHHHHHHHHHHcCCCCCcCCchhHHhhhchHHHHHHH
Q 014483 159 EFSGYTTQVKYGIDRVICCLPRMYQLAQGGTAVGTGLNTKKGFDVKIASAVAEETSLPFVTAENKFEALAAHDAFVETSG 238 (423)
Q Consensus 159 ~~a~~~~~l~r~~~rL~~~~~r~~~~~lGg~A~Gt~~~~~~~~~~~~~~~la~~LGl~~~~~~n~~da~~~rd~~~e~~~ 238 (423)
||++|+++|.|+++||..++++++.+|||| |+||+... ++++..+.+++++.|||+.+..+| ++++||+++++++
T Consensus 162 ~~~~~~~~l~r~~~rL~~~~~~~~~~~lGg-avGt~~a~-~~~~~~i~~~~a~~LGl~~~~~~~---~~~~rd~~~e~~~ 236 (449)
T PRK08540 162 RFAIWASEIQRHLERLEQLKPRVCVGQMTG-AVGTQAAF-GEKGIEIQKRVMEILGLKPVLISN---QVIQRDRHAEFMM 236 (449)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhheccccc-cccchhhC-CCccHHHHHHHHHHcCCCCCCCcC---CccccHHHHHHHH
Confidence 999999999999999999999999999999 99997543 556778889999999999865444 3699999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCcceeEecC--CCCCCCCCCCCCCChhHHHHHHHHHHHhhhhhHHHhhhhcCcccc
Q 014483 239 ALNTVAASLMKIANDVRLLGSGPRCGLGELILP--ENEPGSSIMPGKVNPTQCEALTMVCAQVIGNHVAITVGGSNGHFE 316 (423)
Q Consensus 239 ~l~~~~~~L~ria~Dl~~~~s~~r~e~gev~~~--~~~~gSS~MPqKrNP~~~E~i~~~a~~~~g~~~~~~~~~~~~~~e 316 (423)
+++.++++|+|||+|+++|+ ++||||+.++ ++++|||||||||||+.+|.++++++++.|....++. ....+++
T Consensus 237 ~l~~~a~~l~kia~Dl~l~s---~~e~gei~e~~~~~~~GSSiMP~K~NP~~~E~i~~~a~~~~g~~~~~~~-~~~~~~~ 312 (449)
T PRK08540 237 FLANIATTLDKIGLEIRNLQ---RTEIGEVEEEFGKKQVGSSTMPHKRNPITSEQICGLARVVRSNVEPALL-NNPLWDE 312 (449)
T ss_pred HHHHHHHHHHHHHHHHHHHH---hhhhhhhhcccCCCCCCcCCCCCCcCcHHHHHHHHHHHHHHHHHHHHHh-cchhhhc
Confidence 99999999999999999999 5799999864 5689999999999999999999999999999876654 3344577
Q ss_pred cccchhhhHhhhhhHHHHHHHHHHHHHHHhhhCceeCHHHHHHHHHhhhhH--HHh----hcc-cccHHHHHH----HHH
Q 014483 317 LNVFKPMIASGLLHSLRLLGDASASFEKNCVRGIQANRERISKLLHESLML--VTS----LNP-KIGYDNAAA----VAK 385 (423)
Q Consensus 317 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~l~v~~~rm~~~l~~~~~~--~~~----la~-~~g~~~a~~----~~~ 385 (423)
++...|..+|.+++++..+..+++.++..++++|+||++||++|+..+.++ +++ |++ .+||++||+ +++
T Consensus 313 rd~~~~~~e~~~l~~~~~~~~~~l~~~~~~l~~l~v~~~rm~~~l~~~~~~~~ae~la~~L~~~glg~~~Ah~~v~~l~~ 392 (449)
T PRK08540 313 RDLTNSSCERIIFPESCVLTDHILKLMIKVLEGLRFNPENIRRNLELTKGLIMAEAVMIELAKRGMGRQEAHELVRQAAM 392 (449)
T ss_pred cCCchhHHHHHHHHHHHHHHHHHHHHHHHHHccCEECHHHHHHHHHHhcCHHHHHHHHHHHHHcCCCHHHHHHHHHHHHH
Confidence 777888888999998888888888888999999999999999999854444 333 344 589999976 455
Q ss_pred HHHHcCCCHHHHHHHc----CCCCHHHHhhccCcccccCCC
Q 014483 386 KAHKEGTTLKDAALKL----GVLNSEEFDNLVVPEKMIGPS 422 (423)
Q Consensus 386 ~a~~~g~~l~e~~~~~----~~l~~~~l~~~~dp~~~~g~~ 422 (423)
.+..+|+++++++.++ +.+++++|++++||.+|+|..
T Consensus 393 ~a~~~g~~l~e~~~~~~~~~~~l~~~~l~~~ldp~~~~g~a 433 (449)
T PRK08540 393 KAHEEGRHLKEVLLEDEEVMKYLTEEELEELLDPETYIGTA 433 (449)
T ss_pred HHHHhCCCHHHHHHhChhhhccCCHHHHHHHcCHHHhcCch
Confidence 6888999999998876 578899999999999999863
No 27
>COG0015 PurB Adenylosuccinate lyase [Nucleotide transport and metabolism]
Probab=100.00 E-value=2e-75 Score=583.06 Aligned_cols=387 Identities=26% Similarity=0.343 Sum_probs=340.7
Q ss_pred CHHHHHHHHHHHHHHHHHHHHcC-CCHHHHHHHHHHHH-------HHHccccCCCCcccccccCcccccccchHHHHHHH
Q 014483 2 PEPIVRAFGILKKCAAKVNMEYG-LDPAIGKAIMQAAQ-------EVAEGKLNDHFPLVVWQTGSGTQSNMNANEVIANR 73 (423)
Q Consensus 2 ~~~~~~~~~~ve~A~a~a~~~~g-ip~~~a~~I~~a~~-------~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ie~~ 73 (423)
+++++++|++||.|++.++++.| ||+++++.|.+++. .|.+...... .++-.+ ...
T Consensus 16 ~~~~~~~~l~vE~ala~A~aelG~Ip~~a~~~I~~~~~~~~~d~~~i~eie~~t~---------------HdV~a~-v~~ 79 (438)
T COG0015 16 EEAKLRAWLKVEAALARAQAELGVIPAEAAAEIDAAAAFAEFDLERIKEIEAETG---------------HDVKAL-VRA 79 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHhcccccCHHHHHHHHHHhC---------------CCcHHH-HHH
Confidence 57899999999999999999999 99999999999863 2322111111 222222 345
Q ss_pred HHHHhCccCCCcccccccccCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcceecccCCCCCcC
Q 014483 74 AAEILGHKRGEKIVHPNDHVNRSQSSNDTFPTVMHIAAAMETNSRLIPNLKVLHNSLHSKSVEFKDIVKIGRTHTQDATP 153 (423)
Q Consensus 74 l~~~~g~~~g~~~~h~~~~v~~g~S~nDi~~Ta~~l~~~~~~~~~l~~~l~~l~~~L~~~A~~~~~~~m~grTh~Q~A~P 153 (423)
+.+.||++.++| || +|+|||||+||++.|++ +++++.|.+.|.++++.|.++|.+|+|++|+||||+|||+|
T Consensus 80 l~e~~~~~~~~~-VH------~GaTS~DI~Dta~~L~l-k~a~~ii~~~l~~l~~~L~~~A~~~k~t~m~GRTHgq~A~P 151 (438)
T COG0015 80 LAEKVGEEASEY-VH------FGATSQDIIDTALALQL-KEALDLILPDLKRLIEALAELALEHKDTPMLGRTHGQPAEP 151 (438)
T ss_pred HHHhcCcccccc-ee------cccchHHHHhHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHhCCCeecccccCCCCcc
Confidence 688888666666 66 59999999999998776 55688999999999999999999999999999999999999
Q ss_pred CChhHHHHHHHHHHHHHHHHHHHHhhhhhhcccccccccCCCCCCCcchHHHHHHHHHHcCCCCCcCCchhHHhhhchHH
Q 014483 154 LTLGQEFSGYTTQVKYGIDRVICCLPRMYQLAQGGTAVGTGLNTKKGFDVKIASAVAEETSLPFVTAENKFEALAAHDAF 233 (423)
Q Consensus 154 ~T~G~~~a~~~~~l~r~~~rL~~~~~r~~~~~lGg~A~Gt~~~~~~~~~~~~~~~la~~LGl~~~~~~n~~da~~~rd~~ 233 (423)
||||++++.|++++.|+++||.++.+++..+++|| |+||..+. ++.+.++++++++.|||..++.++ |+.+||++
T Consensus 152 tT~G~k~A~w~~el~R~~~rL~~~~~~~~~g~i~G-a~Gt~Aa~-~~~~~~ve~~v~e~LGL~~~p~st---q~~~RD~~ 226 (438)
T COG0015 152 TTFGKKFANWLAELLRHLERLEEAEERIIVGKIGG-AVGTLAAL-GDLGAEVEERVAEKLGLKPAPIST---QVSPRDRI 226 (438)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHhhhhhhcccc-chhhHhhc-CchhHHHHHHHHHHcCCCCCCCCc---ccccchHH
Confidence 99999999999999999999999999999999999 99997665 445789999999999999767665 68999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcceeEecC--CCCCCCCCCCCCCChhHHHHHHHHHHHhhhhhHHHhhhhc
Q 014483 234 VETSGALNTVAASLMKIANDVRLLGSGPRCGLGELILP--ENEPGSSIMPGKVNPTQCEALTMVCAQVIGNHVAITVGGS 311 (423)
Q Consensus 234 ~e~~~~l~~~~~~L~ria~Dl~~~~s~~r~e~gev~~~--~~~~gSS~MPqKrNP~~~E~i~~~a~~~~g~~~~~~~~~~ 311 (423)
+++.++|++++++|.|||.||++|+ |+|++||.+| ++++|||+|||||||+.+|++.++++.+.++...++...
T Consensus 227 ae~~~~La~i~~sl~k~a~dIr~l~---~~e~~Ev~E~f~~gq~GSSaMPHKrNPi~~E~~~glar~~r~~~~~~~e~~- 302 (438)
T COG0015 227 AEFFSALALLAGSLEKFARDIRLLQ---RTEVGEVEEPFAKGQVGSSAMPHKRNPIDSENVTGLARVARALVSTLLENL- 302 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH---hccccccccccCCCCCCCCCCCcccCcHHHHHHHHHHHHHHHHHHHHHHHh-
Confidence 9999999999999999999999999 6899999998 468999999999999999999999999999988888765
Q ss_pred CcccccccchhhhHhhhhhHHHHHHHHHHHHHHHhhhCceeCHHHHHHHHHhhhhHHH------hhcc-cccHHHHHHHH
Q 014483 312 NGHFELNVFKPMIASGLLHSLRLLGDASASFEKNCVRGIQANRERISKLLHESLMLVT------SLNP-KIGYDNAAAVA 384 (423)
Q Consensus 312 ~~~~e~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~l~v~~~rm~~~l~~~~~~~~------~la~-~~g~~~a~~~~ 384 (423)
..|+|++...|.++|..+|..+.+.+.++..+..++++|.||+++|++|++.+++++. ++.+ .+||++||+++
T Consensus 303 ~~whERdlt~ssver~~Lp~~~~~~~~aL~~~~~vl~~L~v~~~~m~~nL~~~~gli~se~v~~~l~~~g~~Re~a~elv 382 (438)
T COG0015 303 VLWHERDLTDSSVERVILPDAFIAADGALNRLLNVLEGLEVNPERMRRNLDLTLGLIASERVMLALRKKGMGREEAHELV 382 (438)
T ss_pred HHHHhccccchHHHHHHHHHHHHHHHHHHHHHHHHHHhCeeCHHHHHHHHhhccchhhhHHHHHHHHhcCCCHHHHHHHH
Confidence 8899999999999999999999999999998889999999999999999999988653 4555 68999999877
Q ss_pred H----HHHHcCCCHHHHHHHc----CCCCHHHHhhccCcccccCC
Q 014483 385 K----KAHKEGTTLKDAALKL----GVLNSEEFDNLVVPEKMIGP 421 (423)
Q Consensus 385 ~----~a~~~g~~l~e~~~~~----~~l~~~~l~~~~dp~~~~g~ 421 (423)
+ .+.+++++|.+.+.++ +++++++++++|||.+|+|.
T Consensus 383 r~~a~~~~~~~~~~~~~~l~~~~v~~~~~~~~~~~~~dp~~y~G~ 427 (438)
T COG0015 383 REKAMKAWEQGKEFLELLLADERVTKYLSEEELLELLDPANYLGR 427 (438)
T ss_pred HHHHHHHHHhccchHHHhccchhhhccCcHHHHHHcCCHHHHhhH
Confidence 5 5667899998777665 58999999999999999995
No 28
>PRK04833 argininosuccinate lyase; Provisional
Probab=100.00 E-value=8.5e-75 Score=594.24 Aligned_cols=390 Identities=19% Similarity=0.257 Sum_probs=328.8
Q ss_pred HHHHHHHHH---HH--HHHHHHHHHcC-CCHHHHHHHHHHHHHHHccccCCCCcccccccCcccccccchHHHHHHHHHH
Q 014483 3 EPIVRAFGI---LK--KCAAKVNMEYG-LDPAIGKAIMQAAQEVAEGKLNDHFPLVVWQTGSGTQSNMNANEVIANRAAE 76 (423)
Q Consensus 3 ~~~~~~~~~---ve--~A~a~a~~~~g-ip~~~a~~I~~a~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ie~~l~~ 76 (423)
...++.|+. |+ .||+.+|++.| ||++++++|.++|+++.++... ++...+. +..+ ++|++||+++++
T Consensus 22 ~~~~d~~l~~~~i~~~~Aha~~l~e~Gii~~~~a~~I~~al~~i~~~~~~--~~~~~~~-~~~e----dv~~~ie~~L~~ 94 (455)
T PRK04833 22 SLRFDYRLAEQDIVGSVAWSKALVTVGVLTADEQQQLEEALNELLEEVRA--NPQQILA-SDAE----DIHSWVEGKLID 94 (455)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHhhhhc--CCcccCC-CCCc----hHHHHHHHHHHH
Confidence 456788888 88 99999999999 9999999999999998643211 1111111 2223 378889999999
Q ss_pred HhCccCCCcccccccccCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcceecccCCCCCcCCCh
Q 014483 77 ILGHKRGEKIVHPNDHVNRSQSSNDTFPTVMHIAAAMETNSRLIPNLKVLHNSLHSKSVEFKDIVKIGRTHTQDATPLTL 156 (423)
Q Consensus 77 ~~g~~~g~~~~h~~~~v~~g~S~nDi~~Ta~~l~~~~~~~~~l~~~l~~l~~~L~~~A~~~~~~~m~grTh~Q~A~P~T~ 156 (423)
++| +.|+| +|+ |+||||+++|+++|++++. +..+.+.|..|+++|.++|++|+||+||||||+||||||||
T Consensus 95 ~~g-~~g~~-lH~------grSrnD~~~Ta~rl~~r~~-l~~l~~~l~~l~~~L~~~A~~~~~tvm~GrTH~Q~AqP~T~ 165 (455)
T PRK04833 95 KVG-DLGKK-LHT------GRSRNDQVATDLKLWCKDQ-VAELLTALRQLQSALVETAENNQDAVMPGYTHLQRAQPVTF 165 (455)
T ss_pred Hhc-cccCc-ccC------CCCchhhHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHcCCCEEeccccCccceeccH
Confidence 998 67888 885 9999999999999998765 57999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhhhhhhcccccccc-cCCCCCCCcchHHHHHHHHHHcCCCCCcCCchhHHhhhchHHHH
Q 014483 157 GQEFSGYTTQVKYGIDRVICCLPRMYQLAQGGTAV-GTGLNTKKGFDVKIASAVAEETSLPFVTAENKFEALAAHDAFVE 235 (423)
Q Consensus 157 G~~~a~~~~~l~r~~~rL~~~~~r~~~~~lGg~A~-Gt~~~~~~~~~~~~~~~la~~LGl~~~~~~n~~da~~~rd~~~e 235 (423)
|||+++|+++|.|+++||..++++++.|||||+|+ ||++++++ ++++++|||+. +..|.+|++++||++++
T Consensus 166 G~~~~~~~~~l~r~~~rL~~~~~~~~~~plGgaA~~GT~~~~dr-------~~~a~~LGf~~-~~~n~~~a~~~rd~~~e 237 (455)
T PRK04833 166 AHWCLAYVEMLARDESRLQDALKRLDVSPLGSGALAGTAYEIDR-------EQLAGWLGFAS-ATRNSLDSVSDRDHVLE 237 (455)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCccccccCCCCCCH-------HHHHHHhCCCC-CCCCHHHHHhccHHHHH
Confidence 99999999999999999999999999999999886 99999876 48999999998 58899999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCCCcceeEecCCC-CCCCCCCCCCCChhHHHHHHHHHHHhhhhhHHHhhhhcCc-
Q 014483 236 TSGALNTVAASLMKIANDVRLLGSGPRCGLGELILPEN-EPGSSIMPGKVNPTQCEALTMVCAQVIGNHVAITVGGSNG- 313 (423)
Q Consensus 236 ~~~~l~~~~~~L~ria~Dl~~~~s~~r~e~gev~~~~~-~~gSS~MPqKrNP~~~E~i~~~a~~~~g~~~~~~~~~~~~- 313 (423)
+++.+++++++|+|||+|+++|+| +|||++++++. ++|||||||||||+.+|.++++++++.|++++++....+.
T Consensus 238 ~~~~l~~~a~~L~ria~Dl~l~ss---~e~g~~el~~~~~~gSSiMPqKrNP~~~E~ir~~a~~~~g~~~~~~~~~~~~~ 314 (455)
T PRK04833 238 LLSDASISMVHLSRFAEDLIFFNS---GEAGFVELSDRVTSGSSLMPQKKNPDALELIRGKCGRVQGALTGMLMTLKGLP 314 (455)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhC---CCCCceeeCCCCCCCcccCCCCCCChHHHHHHHHHHHHHhhHHHHHHHHhCCh
Confidence 999999999999999999999997 48998888875 7999999999999999999999999999999888644333
Q ss_pred -ccccccchhhhHhhhhhHHHHHHHHHHHHHHHhhhCceeCHHHHHHHHHhhhhHHHhhcc-----cccHHHHHHHH---
Q 014483 314 -HFELNVFKPMIASGLLHSLRLLGDASASFEKNCVRGIQANRERISKLLHESLMLVTSLNP-----KIGYDNAAAVA--- 384 (423)
Q Consensus 314 -~~e~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~l~v~~~rm~~~l~~~~~~~~~la~-----~~g~~~a~~~~--- 384 (423)
.++++...|. ..+++.+..+.. ++.++..++++|+||+++|++|+..++.+++++++ .+|+++||++|
T Consensus 315 ~~~~rd~~~~~--~~l~~~~~~~~~-~l~~~~~~l~~l~v~~~rm~~~~~~g~~~a~~~a~~L~~~g~~~r~Ah~~v~~~ 391 (455)
T PRK04833 315 LAYNKDMQEDK--EGLFDALDTWLD-CLHMAALVLDGIQVKRPRCQEAAQQGYANATELADYLVAKGVPFREAHHIVGEA 391 (455)
T ss_pred HHHhhhhhhhH--HHHHHHHHHHHH-HHHHHHHHHhhCeECHHHHHHHHHccHHHHHHHHHHHHHcCCCHHHHHHHHHHH
Confidence 3445544443 345566666655 55555789999999999999999988887776653 37899998655
Q ss_pred -HHHHHcCCCHHHHHHHc----CCCCHHHHhhccCcccccCCC
Q 014483 385 -KKAHKEGTTLKDAALKL----GVLNSEEFDNLVVPEKMIGPS 422 (423)
Q Consensus 385 -~~a~~~g~~l~e~~~~~----~~l~~~~l~~~~dp~~~~g~~ 422 (423)
+.+.++|+++.+++.+. ....++++..++||..+|..+
T Consensus 392 ~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~p~~~v~~r 434 (455)
T PRK04833 392 VVEAIRQGKPLEDLPLAELQKFSSVIGDDVYPILSLQSCLDKR 434 (455)
T ss_pred HHHHHHcCCChhhcCHHHHHHhcccchHHHHHhCCHHHHHHhc
Confidence 46778899988875543 344567799999999988654
No 29
>KOG1317 consensus Fumarase [Energy production and conversion]
Probab=100.00 E-value=7.6e-75 Score=540.95 Aligned_cols=422 Identities=80% Similarity=1.183 Sum_probs=413.3
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHccccCCCCcccccccCcccccccchHHHHHHHHHHHhCc
Q 014483 1 MPEPIVRAFGILKKCAAKVNMEYGLDPAIGKAIMQAAQEVAEGKLNDHFPLVVWQTGSGTQSNMNANEVIANRAAEILGH 80 (423)
Q Consensus 1 ~~~~~~~~~~~ve~A~a~a~~~~gip~~~a~~I~~a~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ie~~l~~~~g~ 80 (423)
||...|++|.-+++|.|.++.+.|+++..+.+|.++++++.++++.++||+..+|.++++.-+||.||||.++.++.+|.
T Consensus 66 MP~pii~AfGiLKkaaA~vN~~~GLDpkis~Ai~~AadeV~~GKL~dhFPLvvwQTGSGTQsNMN~NEVIsNrAieilGg 145 (487)
T KOG1317|consen 66 MPEPIIQAFGILKKAAAEVNQEYGLDPKISKAISQAADEVASGKLNDHFPLVVWQTGSGTQSNMNANEVISNRAIEILGG 145 (487)
T ss_pred CchHHHHHHHHHHHHHHHHhHhhCCChHHHHHHHHHHHHHhcCcccccCceeEEecCCCccccCcHHHHHHHHHHHHhcc
Confidence 78999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCcccccccccCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcceecccCCCCCcCCChhHHH
Q 014483 81 KRGEKIVHPNDHVNRSQSSNDTFPTVMHIAAAMETNSRLIPNLKVLHNSLHSKSVEFKDIVKIGRTHTQDATPLTLGQEF 160 (423)
Q Consensus 81 ~~g~~~~h~~~~v~~g~S~nDi~~Ta~~l~~~~~~~~~l~~~l~~l~~~L~~~A~~~~~~~m~grTh~Q~A~P~T~G~~~ 160 (423)
+.|.+.+|+++|||..+||||...|++.+..-.++...|++.|..|.++|..++++|+|++.+||||.|+|.|.|+|+.|
T Consensus 146 ~~GsK~VHPNdHvN~SQSSNDTFPtamHIa~~~ei~~~L~P~l~~L~~aL~aKs~EfkdIiKIGRTHtqDAvPLTLGQEF 225 (487)
T KOG1317|consen 146 KLGSKKVHPNDHVNKSQSSNDTFPTAMHIAAATEINSRLIPALTNLRDALEAKSKEFKDIIKIGRTHTQDAVPLTLGQEF 225 (487)
T ss_pred cccCcccCCccccccccccCCccchHHHHHHHHHHHHhhhHHHHHHHHHHHhhhHHHHHHHHhcccccccccccchhhhh
Confidence 99988799999999999999999999999998899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhhcccccccccCCCCCCCcchHHHHHHHHHHcCCCCCcCCchhHHhhhchHHHHHHHHH
Q 014483 161 SGYTTQVKYGIDRVICCLPRMYQLAQGGTAVGTGLNTKKGFDVKIASAVAEETSLPFVTAENKFEALAAHDAFVETSGAL 240 (423)
Q Consensus 161 a~~~~~l~r~~~rL~~~~~r~~~~~lGg~A~Gt~~~~~~~~~~~~~~~la~~LGl~~~~~~n~~da~~~rd~~~e~~~~l 240 (423)
++|.+++...++|+..+.+|+.....||+||||+.+.-++|+..+.++++++.||++...+|-+.+.+.+|..+|+.+.|
T Consensus 226 sgY~qQ~~ngl~Rv~~~lpr~y~LA~GGTAVGTGLNTr~GFaeK~a~~va~ltgLpFvtApNkFEALAahDA~VE~~Gal 305 (487)
T KOG1317|consen 226 SGYVQQVTNGLQRVAATLPRLYQLAQGGTAVGTGLNTRKGFAEKIAARVAELTGLPFVTAPNKFEALAAHDAMVEVSGAL 305 (487)
T ss_pred hhHHHHHHHHHHHHHhhhhHHHHHhcCCccccccccccccHHHHHHHHHHHHhCCCceecccHHHHHHhhhhHHHhcccH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCcceeEecCCCCCCCCCCCCCCChhHHHHHHHHHHHhhhhhHHHhhhhcCcccccccc
Q 014483 241 NTVAASLMKIANDVRLLGSGPRCGLGELILPENEPGSSIMPGKVNPTQCEALTMVCAQVIGNHVAITVGGSNGHFELNVF 320 (423)
Q Consensus 241 ~~~~~~L~ria~Dl~~~~s~~r~e~gev~~~~~~~gSS~MPqKrNP~~~E~i~~~a~~~~g~~~~~~~~~~~~~~e~~~~ 320 (423)
..++++|-||++||+++.|+||+++||+.+|+..+||||||.|.||..||.+-..|.++.|+.+.+....++++||++.+
T Consensus 306 Nt~A~SlmKianDIRfLGSGPRcGlgEL~LPENEPGSSIMPGKVNPTQcEamTmvcaQVMGN~vAvtvgGsnGhFELNVF 385 (487)
T KOG1317|consen 306 NTIAVSLMKIANDIRFLGSGPRCGLGELMLPENEPGSSIMPGKVNPTQCEAMTMVCAQVMGNHVAVTVGGSNGHFELNVF 385 (487)
T ss_pred HHHHHHHHHHhhhhhhccCCCCCCccccccCCCCCCcccCCCCCCcHHHHHHHHHHHHHhcCceEEEecccCceeEEecc
Confidence 99999999999999999999999999999999999999999999999999999999999999999888889999999999
Q ss_pred hhhhHhhhhhHHHHHHHHHHHHHHHhhhCceeCHHHHHHHHHhhhhHHHhhcccccHHHHHHHHHHHHHcCCCHHHHHHH
Q 014483 321 KPMIASGLLHSLRLLGDASASFEKNCVRGIQANRERISKLLHESLMLVTSLNPKIGYDNAAAVAKKAHKEGTTLKDAALK 400 (423)
Q Consensus 321 ~~~~~~~~l~~~~~~~~~~~~~~~~~l~~l~v~~~rm~~~l~~~~~~~~~la~~~g~~~a~~~~~~a~~~g~~l~e~~~~ 400 (423)
++++..+++.++.++.++...+...|+.+++.|.||+.+.+.++.+++|+|.+++||+.|..+++.|+++|.+|++...+
T Consensus 386 KP~i~~nvL~SirLl~D~~~sF~~nCV~GI~aN~erI~kll~eSLMLVTALNPhIGYD~aAkiAKtAhKng~TLk~eal~ 465 (487)
T KOG1317|consen 386 KPLIASNVLHSIRLLADASVSFTKNCVVGIEANKERIAKLLNESLMLVTALNPHIGYDNAAKIAKTAHKNGTTLKEEALK 465 (487)
T ss_pred hHHHHHHHHHHHHHhhhhhhhhhhhhhhcccCCHHHHHHHHHhhhhhhhccCCccCchhHHHHHHHHhhcCCcHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999998888
Q ss_pred cCCCCHHHHhhccCcccccCCC
Q 014483 401 LGVLNSEEFDNLVVPEKMIGPS 422 (423)
Q Consensus 401 ~~~l~~~~l~~~~dp~~~~g~~ 422 (423)
-+.+++++.+++..|+..+|+|
T Consensus 466 lG~lTeeqFdewV~Pe~Mlgpk 487 (487)
T KOG1317|consen 466 LGVLTEEQFDEWVVPEKMLGPK 487 (487)
T ss_pred hcCCCHHHHHhhhCHHhccCCC
Confidence 8999999999999999999986
No 30
>cd03302 Adenylsuccinate_lyase_2 Adenylsuccinate lyase (ASL)_subgroup 2. This subgroup contains mainly eukaryotic proteins similar to ASL, a member of the Lyase class I family. Members of this family for the most part catalyze similar beta-elimination reactions in which a C-N or C-O bond is cleaved with the release of fumarate as one of the products. These proteins are active as tetramers. The four active sites of the homotetrameric enzyme are each formed by residues from three different subunits. ASL catalyzes two steps in the de novo purine biosynthesis: the conversion of 5-aminoimidazole-(N-succinylocarboxamide) ribotide (SAICAR) into 5-aminoimidazole-4-carboxamide ribotide (AICAR) and, the conversion of adenylsuccinate (SAMP) into adenosine monophosphate (AMP). ASL deficiency has been linked to several pathologies including psychomotor retardation with autistic features, epilepsy and muscle wasting.
Probab=100.00 E-value=1e-73 Score=583.83 Aligned_cols=391 Identities=17% Similarity=0.168 Sum_probs=331.9
Q ss_pred CHHHHHHHHHHHHHHHHHHHHcC--CCHHHHHHHHHHHHHHHccccCCCCcccccccCcccccccchHHHHHHHHHHHhC
Q 014483 2 PEPIVRAFGILKKCAAKVNMEYG--LDPAIGKAIMQAAQEVAEGKLNDHFPLVVWQTGSGTQSNMNANEVIANRAAEILG 79 (423)
Q Consensus 2 ~~~~~~~~~~ve~A~a~a~~~~g--ip~~~a~~I~~a~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ie~~l~~~~g 79 (423)
+++++++|++||.|++.++++.| ||+++++.|.+++.++ ++..+.+.. .....++..++ ..+.+.+|
T Consensus 16 ~~~~~~~~l~~e~ala~a~~~~g~~ip~~~a~~i~~~~~~~---------d~~~i~~~e-~~~~hdv~a~~-~~l~~~~~ 84 (436)
T cd03302 16 PRKKFSTWRKLWLWLAEAEKELGLDISDEQIEEMKANVENI---------DFEIAAAEE-KKLRHDVMAHV-HAFGLLCP 84 (436)
T ss_pred hHHHHHHHHHHHHHHHHhhHHhCCCCCHHHHHHHHHhhhcC---------CHHHHHHHH-HHhCcCchHHH-HHHHHHhH
Confidence 56899999999999999999999 8999999998877211 111111110 01122333333 45788887
Q ss_pred ccCCCcccccccccCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcceecccCCCCCcCCChhHH
Q 014483 80 HKRGEKIVHPNDHVNRSQSSNDTFPTVMHIAAAMETNSRLIPNLKVLHNSLHSKSVEFKDIVKIGRTHTQDATPLTLGQE 159 (423)
Q Consensus 80 ~~~g~~~~h~~~~v~~g~S~nDi~~Ta~~l~~~~~~~~~l~~~l~~l~~~L~~~A~~~~~~~m~grTh~Q~A~P~T~G~~ 159 (423)
+.|+| +|+ |+||||+++|++.|++++ ++..+.+.|..++++|.++|++|+||+||||||+|||+|||||||
T Consensus 85 -~~~~~-vH~------G~TS~Di~dta~~L~lr~-a~~~l~~~L~~l~~~L~~~A~~~~dt~m~GrTH~Q~A~P~TfG~~ 155 (436)
T cd03302 85 -AAAGI-IHL------GATSCFVTDNTDLIQIRD-ALDLILPKLAAVIDRLAEFALEYKDLPTLGFTHYQPAQLTTVGKR 155 (436)
T ss_pred -hccCe-eee------CcCHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhCCCeeeccccCCccccchHHHH
Confidence 67788 885 999999999999987755 568999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhhhcccccccccCCC------CCCCcchHHHHHHHHHHcCCCCCcCCchhHHhhhchHH
Q 014483 160 FSGYTTQVKYGIDRVICCLPRMYQLAQGGTAVGTGL------NTKKGFDVKIASAVAEETSLPFVTAENKFEALAAHDAF 233 (423)
Q Consensus 160 ~a~~~~~l~r~~~rL~~~~~r~~~~~lGg~A~Gt~~------~~~~~~~~~~~~~la~~LGl~~~~~~n~~da~~~rd~~ 233 (423)
+++|+++|.|+++||..++++++.+++|| ++||+. +.++..+.++++++++.|||..+ ..++ +++++||++
T Consensus 156 ~a~~~~~L~r~~~RL~~~~~~~~~~~~~G-avGt~a~~~~~~~~dr~~~~~v~~~~a~~LGl~~~-~~~~-~~v~~rD~~ 232 (436)
T cd03302 156 ACLWIQDLLMDLRNLERLRDDLRFRGVKG-TTGTQASFLDLFEGDHDKVEALDELVTKKAGFKKV-YPVT-GQTYSRKVD 232 (436)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcCcC-hhhhhHHHHhcCCchHHHHHHHHHHHHHHcCCCCC-CCch-hhhhccHHH
Confidence 99999999999999999999999999998 788853 23333356888999999999974 3333 357999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcceeEecC--CCCCCCCCCCCCCChhHHHHHHHHHHHhhhhhHHHhhhhc
Q 014483 234 VETSGALNTVAASLMKIANDVRLLGSGPRCGLGELILP--ENEPGSSIMPGKVNPTQCEALTMVCAQVIGNHVAITVGGS 311 (423)
Q Consensus 234 ~e~~~~l~~~~~~L~ria~Dl~~~~s~~r~e~gev~~~--~~~~gSS~MPqKrNP~~~E~i~~~a~~~~g~~~~~~~~~~ 311 (423)
+++++++++++++|+|||+|+++|+| +||+.+| ++++|||||||||||+.+|+++++|+.+.|++.+++....
T Consensus 233 ~e~~~~la~~a~~L~riA~Dl~l~~s-----~~el~e~~~~g~~GSS~MPhKrNPv~~E~i~~~a~~~~g~~~~~~~~~~ 307 (436)
T cd03302 233 IDVLNALSSLGATAHKIATDIRLLAN-----LKEVEEPFEKGQIGSSAMPYKRNPMRSERCCSLARHLMNLASNAAQTAS 307 (436)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhh-----CceecccccCCCCCcccCCCccCcHHHHHHHHHHHHHHhhHHHHHHHhh
Confidence 99999999999999999999999995 8999998 3589999999999999999999999999999999987788
Q ss_pred CcccccccchhhhHhhhhhHHHHHHHHHHHHHHHhhhCceeCHHHHHHHHHhhhhHH------Hhhccc-ccHHHHHHHH
Q 014483 312 NGHFELNVFKPMIASGLLHSLRLLGDASASFEKNCVRGIQANRERISKLLHESLMLV------TSLNPK-IGYDNAAAVA 384 (423)
Q Consensus 312 ~~~~e~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~l~v~~~rm~~~l~~~~~~~------~~la~~-~g~~~a~~~~ 384 (423)
.+++|++...|..+|..++.+..+...++..+..++++|+||++||++|++.+++++ ..|+++ +||++||++|
T Consensus 308 ~~~~Erd~~~~~~~~~~l~~~~~~~~~~l~~~~~~l~~l~v~~~rm~~~l~~~~g~~~se~~~~~L~~~g~~~~~Ah~~v 387 (436)
T cd03302 308 TQWFERTLDDSANRRIAIPEAFLAADAILITLQNISEGLVVYPKVIERHIRQELPFMATENIIMAAVKAGGDRQDAHERI 387 (436)
T ss_pred ccccccCCchhHHHHHHHHHHHHHHHHHHHHHHHHHcCCEECHHHHHHHHHhccChHHHHHHHHHHHHcCCCHHHHHHHH
Confidence 889999999999999999999999999999989999999999999999999975532 346665 8999999765
Q ss_pred H----HHHHc------CCCHHHHHHHcC---CCCHHHHhhccCcccccCC
Q 014483 385 K----KAHKE------GTTLKDAALKLG---VLNSEEFDNLVVPEKMIGP 421 (423)
Q Consensus 385 ~----~a~~~------g~~l~e~~~~~~---~l~~~~l~~~~dp~~~~g~ 421 (423)
+ ++.++ |.+|+|++.+++ . ++++|+++|||.+|+|.
T Consensus 388 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~~~l~~~~dp~~~~g~ 436 (436)
T cd03302 388 RVLSHQAAAVVKQEGGDNDLIERIKNDAYFKP-IWDELDALLDPKTFIGR 436 (436)
T ss_pred HHHHHHHHHHhhcccCCCCHHHHHhcCCCcCC-CHHHHHHHhCHHhhhCc
Confidence 4 66678 999999999874 3 88899999999999984
No 31
>PRK06390 adenylosuccinate lyase; Provisional
Probab=100.00 E-value=8.4e-74 Score=587.27 Aligned_cols=393 Identities=21% Similarity=0.242 Sum_probs=329.2
Q ss_pred CHHHHHHHHHHHHHHHHHHHHcC-CCHHHHHHHHHHHHHHHccccCCCCcccccccCcccccccchHHHHHHHHHHHhCc
Q 014483 2 PEPIVRAFGILKKCAAKVNMEYG-LDPAIGKAIMQAAQEVAEGKLNDHFPLVVWQTGSGTQSNMNANEVIANRAAEILGH 80 (423)
Q Consensus 2 ~~~~~~~~~~ve~A~a~a~~~~g-ip~~~a~~I~~a~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ie~~l~~~~g~ 80 (423)
+++++++|++||.||+++|.+.| ||++++++|.++|......... +.......+.|+ ..++..+++.||
T Consensus 21 ~~~~~~~~l~ve~A~a~al~~~Giip~~~a~~I~~~l~~~~~d~~~----~~~~~~~~~~dv-----~~~~~~L~~~~g- 90 (451)
T PRK06390 21 DENRLRYMLKVEAAIAKAEYEYGIIPRDAFLDIKNAVDSNSVRLER----VREIESEIKHDV-----MALVEALSEQCS- 90 (451)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHhcccccCCHHH----HHHHHHHhCCCc-----HHHHHHHHHHhh-
Confidence 57899999999999999999999 9999999999988753211000 000001112232 236788889998
Q ss_pred cCCCcccccccccCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcceecccCCCCCcCCChhHHH
Q 014483 81 KRGEKIVHPNDHVNRSQSSNDTFPTVMHIAAAMETNSRLIPNLKVLHNSLHSKSVEFKDIVKIGRTHTQDATPLTLGQEF 160 (423)
Q Consensus 81 ~~g~~~~h~~~~v~~g~S~nDi~~Ta~~l~~~~~~~~~l~~~l~~l~~~L~~~A~~~~~~~m~grTh~Q~A~P~T~G~~~ 160 (423)
+.|+| +|+ |+|||||++|+++|++++ .+..+.+.|..|+++|.++|++|+||+||||||+|||||||||||+
T Consensus 91 ~~~~~-iH~------G~SsnDi~~Ta~~L~lr~-~l~~l~~~l~~l~~~L~~lA~~~~~t~m~grTH~Q~A~P~T~G~~~ 162 (451)
T PRK06390 91 AGKNY-VHF------GVTSNDINDTATALQIHD-FVSIIKDDIKNLMETLIKLIDEYKDSPMMGRTHGQHASPITFGLKF 162 (451)
T ss_pred hhhhh-eec------CccHhhhHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhCCCchhhhhCCCcCeehhHHHHH
Confidence 67888 885 999999999999998865 5679999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhhcccccccccCCCCCCCcchHHHHHHHHHHcCCCCCcCCchhHHhhhchHHHHHHHHH
Q 014483 161 SGYTTQVKYGIDRVICCLPRMYQLAQGGTAVGTGLNTKKGFDVKIASAVAEETSLPFVTAENKFEALAAHDAFVETSGAL 240 (423)
Q Consensus 161 a~~~~~l~r~~~rL~~~~~r~~~~~lGg~A~Gt~~~~~~~~~~~~~~~la~~LGl~~~~~~n~~da~~~rd~~~e~~~~l 240 (423)
++|+++|.|+++||.+++++++.+++|| |+||+...... +..+++++++.|||+.+... +++++||+++++++++
T Consensus 163 ~~~~~~l~r~~~RL~~~~~r~~~~~~~g-avGt~a~~g~~-~~~~~~~~a~~LGl~~~~~~---~~~~~rD~~~e~~~~l 237 (451)
T PRK06390 163 AVYLDEMSRHLDRLTEMGDRAFAGKVLG-PVGTGAALGKD-ALDIQNRVMEILGIYSEIGS---TQIVNRDRYIEYLSVI 237 (451)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhhccCC-hhcChhhCCCc-HHHHHHHHHHHcCCCCCCCc---cccccchHHHHHHHHH
Confidence 9999999999999999999999999999 99998766543 56788999999999985333 2579999999999999
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCcceeEec--CC-CCCCCCCCCCCCChhHHHHHHHHHHHhhhhhHHHhhhhcCccccc
Q 014483 241 NTVAASLMKIANDVRLLGSGPRCGLGELIL--PE-NEPGSSIMPGKVNPTQCEALTMVCAQVIGNHVAITVGGSNGHFEL 317 (423)
Q Consensus 241 ~~~~~~L~ria~Dl~~~~s~~r~e~gev~~--~~-~~~gSS~MPqKrNP~~~E~i~~~a~~~~g~~~~~~~~~~~~~~e~ 317 (423)
+.++++|+|||+||++|+| +||||+.+ ++ +++|||||||||||+.+|.+++++..+.+... ........++++
T Consensus 238 ~~la~~l~kia~Di~l~ss---~e~g~v~E~~~~~~~~GSSiMP~KrNPv~~E~i~~~a~~~~~l~~-~~~~~~~~~~er 313 (451)
T PRK06390 238 NGISVTLEKIATEIRNLQR---PEIDEVSEYFDEESQVGSSSMPSKVNPINSENVVSLSRFIRSLII-PEYEAGVTWHER 313 (451)
T ss_pred HHHHHHHHHHHHHHHHHhc---cccchhhcccccCCCCCccCCCCCCCcHHHHHHHHHHHHHHHhHH-HHHHhhhHhhcc
Confidence 9999999999999999997 57888863 33 68999999999999999999999977777654 333345556888
Q ss_pred ccchhhhHhhhhhHHHHHHHHHHHHHHHhhhCceeCHHHHHHHHHhhhh-----HHHhhccc-ccHHHHHHH----HHHH
Q 014483 318 NVFKPMIASGLLHSLRLLGDASASFEKNCVRGIQANRERISKLLHESLM-----LVTSLNPK-IGYDNAAAV----AKKA 387 (423)
Q Consensus 318 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~l~v~~~rm~~~l~~~~~-----~~~~la~~-~g~~~a~~~----~~~a 387 (423)
+...|..+|..++.+..+.+.++..+..++++|+||++||++|+..++. +++.|++. +||++||++ ++.+
T Consensus 314 d~~~~~~e~~~~~~~~~~~~~~l~~~~~~l~~l~v~~~rm~~~l~~~~~~~se~la~~L~~~G~~~~~Ah~~v~~~~~~a 393 (451)
T PRK06390 314 DLTNSALERFTIPYASILIDYVLYNMNDVLSHLIIKEDEIRRNLESDDSIMSESIVRALTLSGMPRQDAHEFVRRASMEA 393 (451)
T ss_pred CCcchHHHHhhHHHHHHHHHHHHHHHHHHHcCCEECHHHHHHHHhccchhhHHHHHHHHHHcCCCHHHHHHHHHHHHHHH
Confidence 8888888888889888888888888889999999999999999998444 34456664 899999864 4567
Q ss_pred HHcCCCHHHHHHHc---CCCCHHHHhhccCcccccCC
Q 014483 388 HKEGTTLKDAALKL---GVLNSEEFDNLVVPEKMIGP 421 (423)
Q Consensus 388 ~~~g~~l~e~~~~~---~~l~~~~l~~~~dp~~~~g~ 421 (423)
..+|+++++++.++ +.++++++++++||.+|+|+
T Consensus 394 ~~~g~~l~~~~~~~~~~~~l~~~~l~~~ldP~~~i~~ 430 (451)
T PRK06390 394 RSNGKSLKSSLIEAGILKYIDEKTLDRAMDPANFIGQ 430 (451)
T ss_pred HHhCCCHHHHHHhChhhhcCCHHHHHHhcCHHHHhhh
Confidence 78999999988876 35899999999999999984
No 32
>cd01595 Adenylsuccinate_lyase_like Adenylsuccinate lyase (ASL)_like. This group contains ASL, prokaryotic-type 3-carboxy-cis,cis-muconate cycloisomerase (pCMLE), and related proteins. These proteins are members of the Lyase class I family. Members of this family for the most part catalyze similar beta-elimination reactions in which a C-N or C-O bond is cleaved with the release of fumarate as one of the products. These proteins are active as tetramers. The four active sites of the homotetrameric enzyme are each formed by residues from three different subunits. ASL catalyzes two steps in the de novo purine biosynthesis: the conversion of 5-aminoimidazole-(N-succinylocarboxamide) ribotide (SAICAR) into 5-aminoimidazole-4-carboxamide ribotide (AICAR) and; the conversion of adenylsuccinate (SAMP) into adenosine monophosphate (AMP). pCMLE catalyzes the cyclization of 3-carboxy-cis,cis-muconate (3CM) to 4-carboxy-muconolactone, in the beta-ketoadipate pathway. ASL deficiency has been linked t
Probab=100.00 E-value=7.1e-74 Score=577.61 Aligned_cols=358 Identities=25% Similarity=0.297 Sum_probs=311.5
Q ss_pred CHHHHHHHHHHHHHHHHHHHHcC-CCHHHHHHHHHHHHHHHccccCCCCcccccccCcccccccchHHHHHHHHHHHhCc
Q 014483 2 PEPIVRAFGILKKCAAKVNMEYG-LDPAIGKAIMQAAQEVAEGKLNDHFPLVVWQTGSGTQSNMNANEVIANRAAEILGH 80 (423)
Q Consensus 2 ~~~~~~~~~~ve~A~a~a~~~~g-ip~~~a~~I~~a~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ie~~l~~~~g~ 80 (423)
+++++++|++||.||+.+|.+.| ||++++++|.++++.+..+. ...+.... ..+. ++ ..++.++++++|+
T Consensus 7 ~~~~~~~~l~ve~A~a~~l~~~giip~~~a~~i~~~l~~~~~d~-~~~~~~~~---~~~~----~v-~~~e~~L~~~~g~ 77 (381)
T cd01595 7 EENKLRTWLDVEAALAEAQAELGLIPKEAAEEIRAAADVFEIDA-ERIAEIEK---ETGH----DV-IAFVYALAEKCGE 77 (381)
T ss_pred hHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHhhhcccCCH-HHHHHHHH---HhCc----Cc-HHHHHHHHHHhhh
Confidence 57899999999999999999999 99999999999998752110 00001110 1122 22 3478889999996
Q ss_pred cCCCcccccccccCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcceecccCCCCCcCCChhHHH
Q 014483 81 KRGEKIVHPNDHVNRSQSSNDTFPTVMHIAAAMETNSRLIPNLKVLHNSLHSKSVEFKDIVKIGRTHTQDATPLTLGQEF 160 (423)
Q Consensus 81 ~~g~~~~h~~~~v~~g~S~nDi~~Ta~~l~~~~~~~~~l~~~l~~l~~~L~~~A~~~~~~~m~grTh~Q~A~P~T~G~~~ 160 (423)
+.|+| +|+ |+|||||++|+++|++++. +..+.+.|..++++|.++|++|+||+||||||+|||||||||||+
T Consensus 78 ~~~~~-vH~------g~S~nDi~~Ta~~l~lr~~-l~~l~~~l~~l~~~L~~~A~~~~dt~m~grTH~Q~A~P~T~G~~~ 149 (381)
T cd01595 78 DAGEY-VHF------GATSQDINDTALALQLRDA-LDIILPDLDALIDALAKLALEHKDTPMLGRTHGQHALPTTFGKKF 149 (381)
T ss_pred HhhhH-eec------CcCHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHcCChHHhhcCCCCCcchhHHHHH
Confidence 57888 885 9999999999999998765 569999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhhcccccccccCCCCCCCcchHHHHHHHHHHcCCCCCcCCchhHHh-hhchHHHHHHHH
Q 014483 161 SGYTTQVKYGIDRVICCLPRMYQLAQGGTAVGTGLNTKKGFDVKIASAVAEETSLPFVTAENKFEAL-AAHDAFVETSGA 239 (423)
Q Consensus 161 a~~~~~l~r~~~rL~~~~~r~~~~~lGg~A~Gt~~~~~~~~~~~~~~~la~~LGl~~~~~~n~~da~-~~rd~~~e~~~~ 239 (423)
++|+++|.|+++||.+++++++.+|||| ++||+.+.++ ++..+++++++.|||..++ ++|+ ++||+++|++++
T Consensus 150 ~~~~~~L~r~~~rL~~~~~~~~~~~lGg-a~G~g~~~~~-~~~~~~~~~a~~LGl~~~~----~~~~~~~rd~~~e~~~~ 223 (381)
T cd01595 150 AVWAAELLRHLERLEEARERVLVGGISG-AVGTHASLGP-KGPEVEERVAEKLGLKVPP----ITTQIEPRDRIAELLSA 223 (381)
T ss_pred HHHHHHHHHHHHHHHHHHHhchhhhccc-HhhhHhhcCC-cHHHHHHHHHHHcCCCCCC----CCCCcccchHHHHHHHH
Confidence 9999999999999999999999999999 7888766544 6788899999999997543 3453 499999999999
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCCcceeEecCC--CCCCCCCCCCCCChhHHHHHHHHHHHhhhhhHHHhhhhcCccccc
Q 014483 240 LNTVAASLMKIANDVRLLGSGPRCGLGELILPE--NEPGSSIMPGKVNPTQCEALTMVCAQVIGNHVAITVGGSNGHFEL 317 (423)
Q Consensus 240 l~~~~~~L~ria~Dl~~~~s~~r~e~gev~~~~--~~~gSS~MPqKrNP~~~E~i~~~a~~~~g~~~~~~~~~~~~~~e~ 317 (423)
+++++++|+|||+|+++|+| +|||||.+|+ +++|||||||||||+.+|.++++++++.|++.+++... .+++++
T Consensus 224 l~~~~~~l~ria~Dl~~~~s---~e~gev~~~~~~~~~GSS~MPqK~NP~~~E~i~~~a~~~~g~~~~~~~~~-~~~~er 299 (381)
T cd01595 224 LALIAGTLEKIATDIRLLQR---TEIGEVEEPFEKGQVGSSTMPHKRNPIDSENIEGLARLVRALAAPALENL-VQWHER 299 (381)
T ss_pred HHHHHHHHHHHHHHHHHHHh---ccccceeccccCCCCCCccCCCcCCcHHHHHHHHHHHHHHHHHHHHHHhh-hHhhcc
Confidence 99999999999999999996 6999999995 38999999999999999999999999999999888765 778999
Q ss_pred ccchhhhHhhhhhHHHHHHHHHHHHHHHhhhCceeCHHHHHHHHHhhhh------HHHhhccc-ccHHHHHHHHHH
Q 014483 318 NVFKPMIASGLLHSLRLLGDASASFEKNCVRGIQANRERISKLLHESLM------LVTSLNPK-IGYDNAAAVAKK 386 (423)
Q Consensus 318 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~l~v~~~rm~~~l~~~~~------~~~~la~~-~g~~~a~~~~~~ 386 (423)
+...|.++|..++++..+..+++.++..++++|+||++||++|+..+++ +++.|+++ +||++||+++.+
T Consensus 300 d~~~~~~~~~~l~~~~~~~~~~l~~~~~~l~~l~v~~~~m~~~l~~~~g~~~ae~~~~~L~~~g~g~~~Ah~~v~~ 375 (381)
T cd01595 300 DLSDSSVERNILPDAFLLLDAALSRLQGLLEGLVVNPERMRRNLDLTWGLILSEAVMMALAKKGLGRQEAYELVKE 375 (381)
T ss_pred CCcHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCEECHHHHHHHHHhccCHHHHHHHHHHHHHhCCCHhHHHHHHHH
Confidence 9999999999999999999999999899999999999999999999774 23456776 999999999886
No 33
>PRK12308 bifunctional argininosuccinate lyase/N-acetylglutamate synthase; Provisional
Probab=100.00 E-value=6.5e-72 Score=594.46 Aligned_cols=389 Identities=19% Similarity=0.222 Sum_probs=324.6
Q ss_pred CHHHHHHHHHHH-----HHHHHHHHHcC-CCHHHHHHHHHHHHHHHccc-cCCCCcccccccCcccccccchHHHHHHHH
Q 014483 2 PEPIVRAFGILK-----KCAAKVNMEYG-LDPAIGKAIMQAAQEVAEGK-LNDHFPLVVWQTGSGTQSNMNANEVIANRA 74 (423)
Q Consensus 2 ~~~~~~~~~~ve-----~A~a~a~~~~g-ip~~~a~~I~~a~~~i~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ie~~l 74 (423)
+...++.|+.+| .||+.+|++.| ||++++++|.++++++.... .+..+..++ . ..++|++||+++
T Consensus 21 ~~~~~~~~l~~e~i~~~~A~a~~l~~~Giip~~~a~~I~~~l~~~~~~~~~~~~~~~~~----~----~ed~h~~ie~~L 92 (614)
T PRK12308 21 DSLRFDYRLAEQDIVGSIAWSKALLSVGVLSEEEQQKLELALNELKLEVMEDPEQILLS----D----AEDIHSWVEQQL 92 (614)
T ss_pred cCHHHHHHHHHHHHHHhHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCCCC----c----cccHHHHHHHHH
Confidence 346789999999 99999999999 99999999999998874221 111122211 2 244777799999
Q ss_pred HHHhCccCCCcccccccccCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcceecccCCCCCcCC
Q 014483 75 AEILGHKRGEKIVHPNDHVNRSQSSNDTFPTVMHIAAAMETNSRLIPNLKVLHNSLHSKSVEFKDIVKIGRTHTQDATPL 154 (423)
Q Consensus 75 ~~~~g~~~g~~~~h~~~~v~~g~S~nDi~~Ta~~l~~~~~~~~~l~~~l~~l~~~L~~~A~~~~~~~m~grTh~Q~A~P~ 154 (423)
++.+| +.|+| +|+ |+||||+++|+++|++++ .+..+.+.|..|+++|.++|++|++|+||||||+||||||
T Consensus 93 ~~~~g-~~~~~-iH~------g~S~nD~~~Ta~~L~~r~-~~~~l~~~l~~l~~~l~~~a~~~~~t~m~grTH~Q~A~P~ 163 (614)
T PRK12308 93 IGKVG-DLGKK-LHT------GRSRNDQVATDLKLWCRQ-QGQQLLLALDQLQQQMVNVAERHQGTVLPGYTHLQRAQPV 163 (614)
T ss_pred HHHhc-ccccc-eec------CCChhhHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHcCCCEeecCcCCcccEEe
Confidence 99998 67888 885 999999999999999865 5679999999999999999999999999999999999999
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHHhhhhhhcccccccc-cCCCCCCCcchHHHHHHHHHHcCCCCCcCCchhHHhhhchHH
Q 014483 155 TLGQEFSGYTTQVKYGIDRVICCLPRMYQLAQGGTAV-GTGLNTKKGFDVKIASAVAEETSLPFVTAENKFEALAAHDAF 233 (423)
Q Consensus 155 T~G~~~a~~~~~l~r~~~rL~~~~~r~~~~~lGg~A~-Gt~~~~~~~~~~~~~~~la~~LGl~~~~~~n~~da~~~rd~~ 233 (423)
|||||+++|+++|.|+++||.+++++++.+|||||++ ||+++.++ +++++.|||+. +..|.+||+++||++
T Consensus 164 T~G~~~~~~~~~l~r~~~rL~~~~~~~~~~plGgga~agt~~~~~r-------~~~a~~LG~~~-~~~n~~da~~~rd~~ 235 (614)
T PRK12308 164 TFAHWCLAYVEMFERDYSRLEDALTRLDTCPLGSGALAGTAYPIDR-------EALAHNLGFRR-ATRNSLDSVSDRDHV 235 (614)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCchhccccCCCCCCCH-------HHHHHHhCCCC-CcCCHHHHHcCcHHH
Confidence 9999999999999999999999999999999999998 88877765 47999999997 678899999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcceeEecCCC-CCCCCCCCCCCChhHHHHHHHHHHHhhhhhHHHhhhhcC
Q 014483 234 VETSGALNTVAASLMKIANDVRLLGSGPRCGLGELILPEN-EPGSSIMPGKVNPTQCEALTMVCAQVIGNHVAITVGGSN 312 (423)
Q Consensus 234 ~e~~~~l~~~~~~L~ria~Dl~~~~s~~r~e~gev~~~~~-~~gSS~MPqKrNP~~~E~i~~~a~~~~g~~~~~~~~~~~ 312 (423)
+++++++++++++|+|||+|+++|+| +|||++++++. ++|||||||||||+.+|.++++++++.|++++++....+
T Consensus 236 ~e~~~~l~~~~~~l~ria~Dl~~~ss---~e~g~~el~~~~~~gSSiMPqK~NP~~~E~i~~~a~~~~g~~~~~~~~~~~ 312 (614)
T PRK12308 236 MELMSVASISMLHLSRLAEDLIFYNS---GESGFIELADTVTSGSSLMPQKKNPDALELIRGKTGRVYGALAGMMMTVKA 312 (614)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhC---CCcCCEEeCccCCCccccCcCccCCcHHHHHHHHHHHHhhHHHHHHHHHcC
Confidence 99999999999999999999999996 58998888765 799999999999999999999999999999998854332
Q ss_pred c--ccccccchhhhHhhhhhHHHHHHHHHHHHHHHhhhCceeCHHHHHHHHHhhhhHHHhhc----c-cccHHHHHHHHH
Q 014483 313 G--HFELNVFKPMIASGLLHSLRLLGDASASFEKNCVRGIQANRERISKLLHESLMLVTSLN----P-KIGYDNAAAVAK 385 (423)
Q Consensus 313 ~--~~e~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~l~v~~~rm~~~l~~~~~~~~~la----~-~~g~~~a~~~~~ 385 (423)
. .++++...| |..++.+..+...++.++..++++|+||++||++|+..++.++++++ + .+|+++||++|.
T Consensus 313 ~~~~~~rd~~~~---~~~l~~~~~~~~~~l~~~~~~l~~l~v~~~rm~~~~~~g~~~a~~la~~L~~~g~~~r~Ah~~v~ 389 (614)
T PRK12308 313 LPLAYNKDMQED---KEGLFDALDTWNDCMEMAALCFDGIKVNGERTLEAAKQGYANATELADYLVAKGIPFREAHHIVG 389 (614)
T ss_pred Cchhhccchhhh---HHHHHHHHHHHHHHHHHHHHHhCcCEECHHHHHHHHHcCHHHHHHHHHHHHHcCCCHHHHHHHHH
Confidence 2 456665554 33444444444455556679999999999999999988887776654 3 489999986554
Q ss_pred ----HHHHcCCCHHHHHHHc-----CCCCH-----HHHhhccCcccccCC
Q 014483 386 ----KAHKEGTTLKDAALKL-----GVLNS-----EEFDNLVVPEKMIGP 421 (423)
Q Consensus 386 ----~a~~~g~~l~e~~~~~-----~~l~~-----~~l~~~~dp~~~~g~ 421 (423)
.+.++|+++.+++.++ +.+++ .+++..+||..++|.
T Consensus 390 ~~v~~a~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~ 439 (614)
T PRK12308 390 VAVVGAIAKGCALEELSLEQLKEFSDVIEDDVYQILTIESCLEKRCALGG 439 (614)
T ss_pred HHHHHHHHcCCChhhCCHHHHHHhhhhhhHHHHHhCCHHHHHHhccCCCC
Confidence 5778999999876654 34554 446777788888775
No 34
>cd01360 Adenylsuccinate_lyase_1 Adenylsuccinate lyase (ASL)_subgroup 1. This subgroup contains bacterial and archeal proteins similar to ASL, a member of the Lyase class I family. Members of this family for the most part catalyze similar beta-elimination reactions in which a C-N or C-O bond is cleaved with the release of fumarate as one of the products. These proteins are active as tetramers. The four active sites of the homotetrameric enzyme are each formed by residues from three different subunits. ASL catalyzes two steps in the de novo purine biosynthesis: the conversion of 5-aminoimidazole-(N-succinylocarboxamide) ribotide (SAICAR) into 5-aminoimidazole-4-carboxamide ribotide (AICAR) and, the conversion of adenylsuccinate (SAMP) into adenosine monophosphate (AMP).
Probab=100.00 E-value=9.7e-72 Score=562.12 Aligned_cols=352 Identities=22% Similarity=0.255 Sum_probs=297.5
Q ss_pred CHHHHHHHHHHHHHHHHHHHHcC-CCHHHHHHHHHHHHHHHccccCCCCcccccccCcccccccchHHHHHHHHHHHhCc
Q 014483 2 PEPIVRAFGILKKCAAKVNMEYG-LDPAIGKAIMQAAQEVAEGKLNDHFPLVVWQTGSGTQSNMNANEVIANRAAEILGH 80 (423)
Q Consensus 2 ~~~~~~~~~~ve~A~a~a~~~~g-ip~~~a~~I~~a~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ie~~l~~~~g~ 80 (423)
+++++++|++||.||+++|.+.| ||++++++|.++|+...+.. ..+.. ..+.+ +. .++..+++++|
T Consensus 13 ~~~~~~~~l~ve~A~a~~l~~~Glip~~~a~~I~~~l~~~~~~~--~~~~~-----~~~~d----v~-~~e~~L~~~~g- 79 (387)
T cd01360 13 EENKFRKWLEVEAAVCEAWAKLGVIPAEAAEEIRKKAKFDVERV--KEIEA-----ETKHD----VI-AFVTAIAEYCG- 79 (387)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHhhcCHHHH--HHHHH-----HhCCC----hH-HHHHHHHHHHH-
Confidence 57899999999999999999999 99999999999986433210 00000 11111 22 25677888998
Q ss_pred cCCCcccccccccCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcceecccCCCCCcCCChhHHH
Q 014483 81 KRGEKIVHPNDHVNRSQSSNDTFPTVMHIAAAMETNSRLIPNLKVLHNSLHSKSVEFKDIVKIGRTHTQDATPLTLGQEF 160 (423)
Q Consensus 81 ~~g~~~~h~~~~v~~g~S~nDi~~Ta~~l~~~~~~~~~l~~~l~~l~~~L~~~A~~~~~~~m~grTh~Q~A~P~T~G~~~ 160 (423)
+.|+| +|+ |+|||||++|+++|++++ .+..+.+.|..++++|.++|++|+||+||||||+|||||||||||+
T Consensus 80 ~~~~~-lH~------G~S~nDi~~ta~~L~lr~-~l~~l~~~l~~l~~~L~~~A~~~~~t~m~grTH~Q~A~P~TfG~~l 151 (387)
T cd01360 80 EAGRY-IHF------GLTSSDVVDTALALQLRE-ALDIILKDLKELLEVLKKKALEHKDTVMVGRTHGIHAEPTTFGLKF 151 (387)
T ss_pred Hhhhh-eeC------CCChhhhHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhCCCeeehhhcCCcceeehHHHHH
Confidence 46777 775 999999999999999865 4689999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhhcccccccccCCCCCCCcchHHHHHHHHHHcCCCCCcCCchhHHhhhchHHHHHHHHH
Q 014483 161 SGYTTQVKYGIDRVICCLPRMYQLAQGGTAVGTGLNTKKGFDVKIASAVAEETSLPFVTAENKFEALAAHDAFVETSGAL 240 (423)
Q Consensus 161 a~~~~~l~r~~~rL~~~~~r~~~~~lGg~A~Gt~~~~~~~~~~~~~~~la~~LGl~~~~~~n~~da~~~rd~~~e~~~~l 240 (423)
++|+++|.|+++||.+++++++.+|||| |+||+.+.+ ..++++++++|||+.++..| ++++||+++|+++++
T Consensus 152 ~~~~~~L~r~~~rL~~~~~~~~~~~lgg-a~Gt~~~~~----~~~~~~~a~~LG~~~~~~~~---~~~~rD~~~e~~~~l 223 (387)
T cd01360 152 ALWYAEFKRHLERLKEARERILVGKISG-AVGTYANLG----PEVEERVAEKLGLKPEPIST---QVIQRDRHAEYLSTL 223 (387)
T ss_pred HHHHHHHHHHHHHHHHHHHHhHhhccch-HhhcCccCC----HHHHHHHHHHcCCCCCCCCC---cccCcHHHHHHHHHH
Confidence 9999999999999999999999999998 788876553 45678999999999865444 479999999999999
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCcceeEecCC--CCCCCCCCCCCCChhHHHHHHHHHHHhhhhhHHHhhhhcCcccccc
Q 014483 241 NTVAASLMKIANDVRLLGSGPRCGLGELILPE--NEPGSSIMPGKVNPTQCEALTMVCAQVIGNHVAITVGGSNGHFELN 318 (423)
Q Consensus 241 ~~~~~~L~ria~Dl~~~~s~~r~e~gev~~~~--~~~gSS~MPqKrNP~~~E~i~~~a~~~~g~~~~~~~~~~~~~~e~~ 318 (423)
++++++|+|||+|+++|++ +||||+.+|. +++|||||||||||+.+|+++++++.+.|.+.+++. ....+++++
T Consensus 224 a~~~~~L~ria~Dl~~~s~---~e~gel~e~~~~~~~GSS~MPqKrNP~~~E~i~~~a~~~~g~~~~~~~-~~~~~~~rd 299 (387)
T cd01360 224 ALIASTLEKIATEIRHLQR---TEVLEVEEPFSKGQKGSSAMPHKRNPILSENICGLARVIRSNVIPALE-NVALWHERD 299 (387)
T ss_pred HHHHHHHHHHHHHHHHHhh---ccccceecCCCCCCCCcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHh-hhHHhcCCC
Confidence 9999999999999999995 6899999884 579999999999999999999999999999876554 334466778
Q ss_pred cchhhhHhhhhhHHHHHHHHHHHHHHHhhhCceeCHHHHHHHHHh--hhhHHHh----hccc-ccHHHHHHHHHH
Q 014483 319 VFKPMIASGLLHSLRLLGDASASFEKNCVRGIQANRERISKLLHE--SLMLVTS----LNPK-IGYDNAAAVAKK 386 (423)
Q Consensus 319 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~l~v~~~rm~~~l~~--~~~~~~~----la~~-~g~~~a~~~~~~ 386 (423)
...|..+|..++++......++..+..++++|+||++||++|+.. .+.++++ |+++ +||++||++|.+
T Consensus 300 ~~~~~~~~~~l~~~~~~~~~~l~~~~~~l~~l~v~~~rm~~~l~~~~~~~~ae~la~~L~~~g~~~r~Ah~~V~~ 374 (387)
T cd01360 300 ISHSSVERVILPDATILLDYILRRMTRVLENLVVYPENMRRNLNLTKGLIFSQRVLLALVEKGMSREEAYEIVQR 374 (387)
T ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHHHccCEECHHHHHHHHHhccCHHHHHHHHHHHHHcCCCHHHHHHHHHH
Confidence 777777788888887777777777789999999999999999987 3444443 4554 899999999887
No 35
>PRK02186 argininosuccinate lyase; Provisional
Probab=100.00 E-value=5.6e-71 Score=609.63 Aligned_cols=370 Identities=18% Similarity=0.206 Sum_probs=317.2
Q ss_pred CHHHHHHHHHHHHHHHHHHHHcC-CCHHHHHHHHHHHHHHHccccCCCCcccccccCcccccccchHHHHHHHHHHHhCc
Q 014483 2 PEPIVRAFGILKKCAAKVNMEYG-LDPAIGKAIMQAAQEVAEGKLNDHFPLVVWQTGSGTQSNMNANEVIANRAAEILGH 80 (423)
Q Consensus 2 ~~~~~~~~~~ve~A~a~a~~~~g-ip~~~a~~I~~a~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ie~~l~~~~g~ 80 (423)
+++++++|++++.||+.||.+.| ||++++++|.++|.++.+... ..+..++ ..++++++ +|+++++++|+
T Consensus 434 ~~~~~~~~~~~~~Ah~~~l~~~gii~~~~a~~I~~~l~~~~~~~~-~~~~~~~----~~~~~~~~----~e~~L~~~~g~ 504 (887)
T PRK02186 434 PLAELDHLAAIDEAHLVMLGDTGIVAPERARPLLDAHRRLRDAGF-APLLARP----APRGLYML----YEAYLIERLGE 504 (887)
T ss_pred hhhhhHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHhHH-hhCcCCC----CCcchHHH----HHHHHHHHhCh
Confidence 46899999999999999999999 999999999999987753211 2333332 23444554 88999999996
Q ss_pred cCCCcccccccccCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcceecccCCCCCcCCChhHHH
Q 014483 81 KRGEKIVHPNDHVNRSQSSNDTFPTVMHIAAAMETNSRLIPNLKVLHNSLHSKSVEFKDIVKIGRTHTQDATPLTLGQEF 160 (423)
Q Consensus 81 ~~g~~~~h~~~~v~~g~S~nDi~~Ta~~l~~~~~~~~~l~~~l~~l~~~L~~~A~~~~~~~m~grTh~Q~A~P~T~G~~~ 160 (423)
+.|+| +|+ |||||||++|+++|++++. +..+.+.|..|+++|.++|++|+||+||||||+|||||||||||+
T Consensus 505 ~~~~~-lH~------grSrnD~v~T~~~l~lr~~-~~~l~~~l~~l~~~L~~~A~~~~~~~m~g~TH~Q~A~P~T~G~~~ 576 (887)
T PRK02186 505 DVGGV-LQT------ARSRNDINATTTKLHLREA-TSRAFDALWRLRRALVFKASANVDCALPIYSQYQPALPGSLGHYL 576 (887)
T ss_pred hhhcc-cCc------cccHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHcCCCEeecCccCCccccccHHHHH
Confidence 67888 885 9999999999999998665 679999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhhcccccccc-cCCCCCCCcchHHHHHHHHHHcCCCCCcCCchhHHhhhchHHHHHHHH
Q 014483 161 SGYTTQVKYGIDRVICCLPRMYQLAQGGTAV-GTGLNTKKGFDVKIASAVAEETSLPFVTAENKFEALAAHDAFVETSGA 239 (423)
Q Consensus 161 a~~~~~l~r~~~rL~~~~~r~~~~~lGg~A~-Gt~~~~~~~~~~~~~~~la~~LGl~~~~~~n~~da~~~rd~~~e~~~~ 239 (423)
++|+++|.|+++||.++++|++.+||||+|. ||++++++ +++|++|||+. +..|++||+++||+++|++++
T Consensus 577 ~~~~~~l~r~~~rl~~~~~r~~~~plG~aag~gt~~~~~~-------~~~a~~LGf~~-~~~n~~da~~~rd~~~e~~~~ 648 (887)
T PRK02186 577 LAVDGALARETHALFALFEHIDVCPLGAGAGGGTTFPIDP-------EFVARLLGFEQ-PAPNSLDAVASRDGVLHFLSA 648 (887)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCcCCcccccccCCCCCCCH-------HHHHHHcCCCC-CccCHHHHHcccHHHHHHHHH
Confidence 9999999999999999999999999999774 88888776 37999999996 678899999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCCcceeEecCCC-CCCCCCCCCCCChhHHHHHHHHHHHhhhhhHHHhhhhcCcccccc
Q 014483 240 LNTVAASLMKIANDVRLLGSGPRCGLGELILPEN-EPGSSIMPGKVNPTQCEALTMVCAQVIGNHVAITVGGSNGHFELN 318 (423)
Q Consensus 240 l~~~~~~L~ria~Dl~~~~s~~r~e~gev~~~~~-~~gSS~MPqKrNP~~~E~i~~~a~~~~g~~~~~~~~~~~~~~e~~ 318 (423)
+++++++|+|||+||++|+| +||||+.+|+. ++|||||||||||+.+|++|++++++.|++.+++....+.+++++
T Consensus 649 l~~~~~~l~ria~Dl~~~~~---~e~g~i~~~~~~~~gSSiMPqKrNP~~~E~ir~~~~~~~g~~~~~~~~~~~~~~~~~ 725 (887)
T PRK02186 649 MAAISTVLSRLAQDLQLWTT---REFALVSLPDALTGGSSMLPQKKNPFLLEFVKGRAGVVAGALASASAALGKTPFSNS 725 (887)
T ss_pred HHHHHHHHHHHHHHHHHHhC---CCCCcEECCCccccccCCCCCCCCCcHHHHHHHHHHHHhhHHHHHHHHHccCCcccc
Confidence 99999999999999999996 68999999975 799999999999999999999999999999998877778888866
Q ss_pred cchhhhHhhh-hhHHHHHHHHHHHHHHHhhhCceeCHHHHHHHHHhhhhHHHhhc----c--cccHHHHHHHH----HHH
Q 014483 319 VFKPMIASGL-LHSLRLLGDASASFEKNCVRGIQANRERISKLLHESLMLVTSLN----P--KIGYDNAAAVA----KKA 387 (423)
Q Consensus 319 ~~~~~~~~~~-l~~~~~~~~~~~~~~~~~l~~l~v~~~rm~~~l~~~~~~~~~la----~--~~g~~~a~~~~----~~a 387 (423)
...|...|.. ++++..+..++.. +..++++|+||++||++++..+++++++++ + .+||++||++| +.+
T Consensus 726 ~~~~~~~~~~l~~~~~~~~~~l~~-~~~~l~~l~v~~~rm~~~~~~~~~~at~la~~L~~~~g~~fr~Ah~~v~~~v~~~ 804 (887)
T PRK02186 726 FEAGSPMNGPIAQACAAIEDAAAV-LVLLIDGLEADQARMRAHLEDGGVSATAVAESLVVRRSISFRSAHTQVGQAIRQS 804 (887)
T ss_pred cchhhhhHHHHHHHHHHHHHHHHH-HHHHHhhCEECHHHHHHHHhcCcchHHHHHHHHHHhCCCCHHHHHHHHHHHHHHH
Confidence 5444444444 4455555555554 468999999999999999999988877654 4 38999999755 457
Q ss_pred HHcCCCHHHHHHH
Q 014483 388 HKEGTTLKDAALK 400 (423)
Q Consensus 388 ~~~g~~l~e~~~~ 400 (423)
.++|.++.+.+.+
T Consensus 805 ~~~~~~~~~~~~~ 817 (887)
T PRK02186 805 LDQGRSSADALAA 817 (887)
T ss_pred HhcCCcccchHHH
Confidence 7788888776654
No 36
>KOG1316 consensus Argininosuccinate lyase [Amino acid transport and metabolism]
Probab=100.00 E-value=8.4e-72 Score=524.25 Aligned_cols=385 Identities=22% Similarity=0.228 Sum_probs=337.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHcC-CCHHHHHHHHHHHHHHHccccCCCCcccccccCcccccccchHHHHHHHHHHHhCcc
Q 014483 3 EPIVRAFGILKKCAAKVNMEYG-LDPAIGKAIMQAAQEVAEGKLNDHFPLVVWQTGSGTQSNMNANEVIANRAAEILGHK 81 (423)
Q Consensus 3 ~~~~~~~~~ve~A~a~a~~~~g-ip~~~a~~I~~a~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ie~~l~~~~g~~ 81 (423)
+..+++-++=-+|+|.++.+.| |+.++...|.+++++|.++...+.|.+.| +.+|+|++ .|+++.+++| +
T Consensus 32 k~ly~~Dv~gSkaya~~L~~~glit~~e~dkil~gLe~i~~ew~~~kf~~~p----~dEDvHta----nErrL~eliG-~ 102 (464)
T KOG1316|consen 32 KRLYEADVDGSKAYAKALEKAGLITEAELDKILKGLEKIRREWAAGKFKLNP----NDEDVHTA----NERRLTELIG-E 102 (464)
T ss_pred hHHHHhhhhhhHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHhcCceEeCC----CchhhhhH----HHHHHHHHHh-h
Confidence 4556666777899999999999 99999999999999999877778888866 35666665 8999999999 5
Q ss_pred CCCcccccccccCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcceecccCCCCCcCCChhHHHH
Q 014483 82 RGEKIVHPNDHVNRSQSSNDTFPTVMHIAAAMETNSRLIPNLKVLHNSLHSKSVEFKDIVKIGRTHTQDATPLTLGQEFS 161 (423)
Q Consensus 82 ~g~~~~h~~~~v~~g~S~nDi~~Ta~~l~~~~~~~~~l~~~l~~l~~~L~~~A~~~~~~~m~grTh~Q~A~P~T~G~~~a 161 (423)
.+++ +|+ ||||||++.|.+|||+|+ +++.+.-.+..|+++++++|+.+.|++||||||+|.|||+.|.||+.
T Consensus 103 ~agK-lHT------gRSRNDQV~TDlRLw~r~-~i~~~~~~l~~L~~~~v~rAe~~~dvlmpGYTHLQRAQpvrwsH~Ll 174 (464)
T KOG1316|consen 103 IAGK-LHT------GRSRNDQVVTDLRLWLRD-AIDTILGLLWNLIRVLVDRAEAELDVLMPGYTHLQRAQPVRWSHWLL 174 (464)
T ss_pred hhhh-ccc------CccccchhHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHhhccCeeccChhhhhhccCchhHHHHH
Confidence 6677 997 999999999999999966 56899999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhcccccccc-cCCCCCCCcchHHHHHHHHHHcCCCCCcCCchhHHhhhchHHHHHHHHH
Q 014483 162 GYTTQVKYGIDRVICCLPRMYQLAQGGTAV-GTGLNTKKGFDVKIASAVAEETSLPFVTAENKFEALAAHDAFVETSGAL 240 (423)
Q Consensus 162 ~~~~~l~r~~~rL~~~~~r~~~~~lGg~A~-Gt~~~~~~~~~~~~~~~la~~LGl~~~~~~n~~da~~~rd~~~e~~~~l 240 (423)
+++..|.||+.||.+++.|+|..|||+||. |+++++||. -+++.|||+. +.-|+++|++.||+++|+.+|.
T Consensus 175 Sha~~l~~D~~Rl~q~~~R~n~~PLGagALAGnpl~iDR~-------~la~~LgF~~-v~~NSm~AvsDRDFVvef~fw~ 246 (464)
T KOG1316|consen 175 SHAEQLTRDLGRLVQIRKRLNQLPLGAGALAGNPLGIDRE-------FLAEELGFEG-VIMNSMDAVSDRDFVVEFLFWA 246 (464)
T ss_pred HHHHHHHhHHHHHHHHHHHhccCCcccchhcCCCCCccHH-------HHHHhcCCcc-cchhhhhccccchhHHHHHHHH
Confidence 999999999999999999999999999997 999999996 5999999998 7899999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCcceeEecCCC-CCCCCCCCCCCChhHHHHHHHHHHHhhhhhHHHhhhhcCcccccc-
Q 014483 241 NTVAASLMKIANDVRLLGSGPRCGLGELILPEN-EPGSSIMPGKVNPTQCEALTMVCAQVIGNHVAITVGGSNGHFELN- 318 (423)
Q Consensus 241 ~~~~~~L~ria~Dl~~~~s~~r~e~gev~~~~~-~~gSS~MPqKrNP~~~E~i~~~a~~~~g~~~~~~~~~~~~~~e~~- 318 (423)
++++.+|||+|+|+++|++ .|||+|.+.+. .+|||+||||+||+.+|++|++++++.|.++++++...-.+..+|
T Consensus 247 sm~m~HlSRlaEdlIiy~t---~EF~Fv~lSDaySTGSSlMPQKKNpDslELlRgksgrV~gdl~g~lmt~KG~PstYnk 323 (464)
T KOG1316|consen 247 SMVMTHLSRLAEDLIIYST---KEFGFVTLSDAYSTGSSLMPQKKNPDSLELLRGKSGRVFGDLTGLLMTLKGLPSTYNK 323 (464)
T ss_pred HHHHHHHHHHhhHhheeec---cccCceeeccccccCcccCCCCCCCCHHHHhccccceehhhhHHHHHHhcCCcccccc
Confidence 9999999999999999998 48999999986 899999999999999999999999999999999987543322222
Q ss_pred ---cchhhhHhhhhhHHHHHHHHHHHHHHHhhhCceeCHHHHHHHHHhhhhHHHhhccc-----ccHHHHHH----HHHH
Q 014483 319 ---VFKPMIASGLLHSLRLLGDASASFEKNCVRGIQANRERISKLLHESLMLVTSLNPK-----IGYDNAAA----VAKK 386 (423)
Q Consensus 319 ---~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~l~v~~~rm~~~l~~~~~~~~~la~~-----~g~~~a~~----~~~~ 386 (423)
..+ ..++++...+.+++...+ .++++++||+++|.+.+.. .+++|+||++ ++|+++|+ +|..
T Consensus 324 DlQeDK----ep~Fds~~tv~~~l~v~t-gv~stltvn~e~m~~aLt~-dmlATdlA~YLVrKGvPFRqtHhisG~~V~~ 397 (464)
T KOG1316|consen 324 DLQEDK----EPLFDSSKTVSDSLQVAT-GVISTLTVNQENMEKALTP-DMLATDLAYYLVRKGVPFRQTHHISGKAVRM 397 (464)
T ss_pred chhhhh----hHHHhhHHHHHHHHHHHH-HHhhheeECHHHHhhccCc-hhhHhHHHHHHHHcCCCchhhhhhhHHHHHH
Confidence 112 237888888988888885 7999999999999999986 7889998876 58888874 6778
Q ss_pred HHHcCCCHHHHHHHc----CCCCHHHHhhccCcccccCC
Q 014483 387 AHKEGTTLKDAALKL----GVLNSEEFDNLVVPEKMIGP 421 (423)
Q Consensus 387 a~~~g~~l~e~~~~~----~~l~~~~l~~~~dp~~~~g~ 421 (423)
|.+.|.++.++..++ .++-++++-..||.++.|..
T Consensus 398 ae~rg~~l~~LsledlqklsplF~eDv~~v~~ye~sVek 436 (464)
T KOG1316|consen 398 AEERGVTLDKLSLEDLQKLSPLFEEDVFCVFNYENSVEK 436 (464)
T ss_pred HHHcCCCcccCCHHHHhhcCcccccchHHhhchhhhHHH
Confidence 888999887766554 34556778788888877654
No 37
>TIGR02426 protocat_pcaB 3-carboxy-cis,cis-muconate cycloisomerase. Members of this family are 3-carboxy-cis,cis-muconate cycloisomerase, the enzyme the catalyzes the second step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate.
Probab=100.00 E-value=1.8e-69 Score=536.01 Aligned_cols=321 Identities=23% Similarity=0.248 Sum_probs=281.2
Q ss_pred CHHHHHHHHHHHHHHHHHHHHcC-CCHHHHHHHHHHHHHHHccccCCCCcccccccCcccccccchHHHHHHHHHHHhCc
Q 014483 2 PEPIVRAFGILKKCAAKVNMEYG-LDPAIGKAIMQAAQEVAEGKLNDHFPLVVWQTGSGTQSNMNANEVIANRAAEILGH 80 (423)
Q Consensus 2 ~~~~~~~~~~ve~A~a~a~~~~g-ip~~~a~~I~~a~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ie~~l~~~~g~ 80 (423)
+++++++|++||.||+.+|.+.| ||++++++|.++|+++.. ++..+ +.++..+.+....++..+.+++|+
T Consensus 17 d~~~i~~~~~ve~A~a~al~~~Gii~~~~a~~I~~a~~~~~~-------d~~~~--~~~~~~~~~~~~~~~~~l~~~~g~ 87 (338)
T TIGR02426 17 DRAFLRAMLDFEAALARAQADAGLIPAEAAAAIEAACAAAAP-------DLEAL--AHAAATAGNPVIPLVKALRKAVAG 87 (338)
T ss_pred CHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHhhccCCC-------CHHHH--HhHHHhcCCcHHHHHHHHHHHhCc
Confidence 68999999999999999999999 999999999999987521 11111 111111222222356778899997
Q ss_pred cCCCcccccccccCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcceecccCCCCCcCCChhHHH
Q 014483 81 KRGEKIVHPNDHVNRSQSSNDTFPTVMHIAAAMETNSRLIPNLKVLHNSLHSKSVEFKDIVKIGRTHTQDATPLTLGQEF 160 (423)
Q Consensus 81 ~~g~~~~h~~~~v~~g~S~nDi~~Ta~~l~~~~~~~~~l~~~l~~l~~~L~~~A~~~~~~~m~grTh~Q~A~P~T~G~~~ 160 (423)
+.|+| +|+ |+||||+++|+++|++++ .+..+.+.+..|+++|.++|++|+|++||||||+|||||||||||+
T Consensus 88 ~~g~~-vH~------G~S~nD~~~Ta~~L~lr~-~l~~l~~~l~~l~~~L~~~A~~~~~~~m~grTH~Q~A~P~T~G~~l 159 (338)
T TIGR02426 88 EAARY-VHR------GATSQDVIDTSLMLQLRD-ALDLLLADLGRLADALADLAARHRDTPMTGRTLLQQAVPTTFGLKA 159 (338)
T ss_pred cccCc-ccC------CCChhhhHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhCCCceecccCCCcCeehhHHHHH
Confidence 77877 884 999999999999998865 5679999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhhcccccccccCCCCCCCcchHHHHHHHHHHcCCCCCcCCchhHHhhhchHHHHHHHHH
Q 014483 161 SGYTTQVKYGIDRVICCLPRMYQLAQGGTAVGTGLNTKKGFDVKIASAVAEETSLPFVTAENKFEALAAHDAFVETSGAL 240 (423)
Q Consensus 161 a~~~~~l~r~~~rL~~~~~r~~~~~lGg~A~Gt~~~~~~~~~~~~~~~la~~LGl~~~~~~n~~da~~~rd~~~e~~~~l 240 (423)
++|+++|.|+++||.+++++++.+|||| |+||+.+. +.++..+++++++.|||+.+..+ |+++||+++|+++++
T Consensus 160 ~~~~~~l~r~~~rL~~~~~~~~~~~lGg-avGtg~~~-~~~~~~v~~~~a~~LGl~~~~~~----~~~~rd~~~e~~~~l 233 (338)
T TIGR02426 160 AGWLAAVLRARDRLAALRTRALPLQFGG-AAGTLAAL-GTRGGAVAAALAARLGLPLPALP----WHTQRDRIAEFGSAL 233 (338)
T ss_pred HHHHHHHHHHHHHHHHHHHHhHhcCCcc-hhccCCCc-cchHHHHHHHHHHHhCcCCCCCc----chhhhHHHHHHHHHH
Confidence 9999999999999999999999999999 89998664 45778889999999999984322 579999999999999
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCcceeEecCCCCCCCCCCCCCCChhHHHHHHHHHHHhhhhhHHHhhhhcCcccccccc
Q 014483 241 NTVAASLMKIANDVRLLGSGPRCGLGELILPENEPGSSIMPGKVNPTQCEALTMVCAQVIGNHVAITVGGSNGHFELNVF 320 (423)
Q Consensus 241 ~~~~~~L~ria~Dl~~~~s~~r~e~gev~~~~~~~gSS~MPqKrNP~~~E~i~~~a~~~~g~~~~~~~~~~~~~~e~~~~ 320 (423)
++++++|+|||+|+++|++ +||||+.++ .++|||||||||||+.+|.++++|+++.|+..+++. .+.+++|++..
T Consensus 234 ~~la~~l~ria~Dl~l~s~---~e~gei~~~-~~~GSSiMPqK~NP~~~E~i~~~a~~~~g~~~~~~~-~~~~~~Er~~~ 308 (338)
T TIGR02426 234 ALVAGALGKIAGDIALLSQ---TEVGEVFEA-GGGGSSAMPHKRNPVGAALLAAAARRVPGLAATLHA-ALPQEHERSLG 308 (338)
T ss_pred HHHHHHHHHHHHHHHHHhc---CCCChhhhC-CCCCcccCCCCCCcHHHHHHHHHHHHHHHHHHHHHH-hchHhhccCCC
Confidence 9999999999999999995 689999884 479999999999999999999999999999888865 57889999999
Q ss_pred hhhhHhhhhhHHHHHHHHHHHHHHHhhhCc
Q 014483 321 KPMIASGLLHSLRLLGDASASFEKNCVRGI 350 (423)
Q Consensus 321 ~~~~~~~~l~~~~~~~~~~~~~~~~~l~~l 350 (423)
.|..+|.++|+++.+.++++..+..++++|
T Consensus 309 ~~~~e~~~lp~~~~~~~~~l~~~~~~l~~l 338 (338)
T TIGR02426 309 GWHAEWETLPELVRLTGGALRQAQVLAEGL 338 (338)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 999999999999999999999988888875
No 38
>cd01334 Lyase_I Lyase class I family; a group of proteins which catalyze similar beta-elimination reactions. The Lyase class I family contains class II fumarase, aspartase, adenylosuccinate lyase (ASL), argininosuccinate lyase (ASAL), prokaryotic-type 3-carboxy-cis,cis-muconate cycloisomerase (pCMLE), and related proteins. It belongs to the Lyase_I superfamily. Proteins of this family for the most part catalyze similar beta-elimination reactions in which a C-N or C-O bond is cleaved with the release of fumarate as one of the products. These proteins are active as tetramers. The four active sites of the homotetrameric enzyme are each formed by residues from three different subunits.
Probab=100.00 E-value=3e-69 Score=533.85 Aligned_cols=323 Identities=37% Similarity=0.462 Sum_probs=276.4
Q ss_pred HHHHHHHHHHHHHHHHHcC-CCHHHHHHHHHHHHHHHccccCCCCcccccccCcccccccchHHHHHHHHHHHhCccCCC
Q 014483 6 VRAFGILKKCAAKVNMEYG-LDPAIGKAIMQAAQEVAEGKLNDHFPLVVWQTGSGTQSNMNANEVIANRAAEILGHKRGE 84 (423)
Q Consensus 6 ~~~~~~ve~A~a~a~~~~g-ip~~~a~~I~~a~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ie~~l~~~~g~~~g~ 84 (423)
+++|+++|.||+++|.+.| ||+++++.|.++|.++..+..+..+ .+++..++.+++ +++++.+++|++.++
T Consensus 1 ~~~~l~ve~A~a~al~~~Gli~~~~a~~I~~~l~~~~~~~~~~~~----~~~~~~~~~~~~----~e~~l~~~~g~~~~~ 72 (325)
T cd01334 1 IRADLQVEKAHAKALAELGLLPKEAAEAILAALDEILEGIAADQV----EQEGSGTHDVMA----VEEVLAERAGELNGG 72 (325)
T ss_pred CHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHhCccccCe----eeCCCCccHHHH----HHHHHHHHhccccCC
Confidence 4789999999999999999 9999999999999998643322111 123345555555 677788999966577
Q ss_pred cccccccccCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcceecccCCCCCcCCChhHHHHHHH
Q 014483 85 KIVHPNDHVNRSQSSNDTFPTVMHIAAAMETNSRLIPNLKVLHNSLHSKSVEFKDIVKIGRTHTQDATPLTLGQEFSGYT 164 (423)
Q Consensus 85 ~~~h~~~~v~~g~S~nDi~~Ta~~l~~~~~~~~~l~~~l~~l~~~L~~~A~~~~~~~m~grTh~Q~A~P~T~G~~~a~~~ 164 (423)
| +| +|+||||+++|+++|++++ ++..+.+.|.+++++|.++|++|+||+||||||+|||||||||||+++|+
T Consensus 73 ~-lH------~G~S~nDi~~ta~~l~lr~-~~~~l~~~l~~l~~~L~~~A~~~~~t~m~grTH~Q~A~P~T~G~~~~~~~ 144 (325)
T cd01334 73 Y-VH------TGRSSNDIVDTALRLALRD-ALDILLPALKALIDALAAKAEEHKDTVMPGRTHLQDAQPTTLGHELAAWA 144 (325)
T ss_pred C-Cc------cCCCCccHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHccCcEeecccccccCccccHHHHHHHHH
Confidence 7 77 4999999999999999866 56799999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhhhhhhcccccccccCCCCCCCcchHHHHHHHHHHcCCCCCcCCchhHHhhhchHHHHHHHHHHHHH
Q 014483 165 TQVKYGIDRVICCLPRMYQLAQGGTAVGTGLNTKKGFDVKIASAVAEETSLPFVTAENKFEALAAHDAFVETSGALNTVA 244 (423)
Q Consensus 165 ~~l~r~~~rL~~~~~r~~~~~lGg~A~Gt~~~~~~~~~~~~~~~la~~LGl~~~~~~n~~da~~~rd~~~e~~~~l~~~~ 244 (423)
++|.|+++||.+++++++.+|||+||+||+...+ ..+++++++.|||.. +..|+++++++||+++|++++++.++
T Consensus 145 ~~l~r~~~rL~~~~~~~~~~~lG~gA~g~~~~~~----~~~~~~~a~~LG~~~-~~~~~~~a~~~rd~~~e~~~~l~~~~ 219 (325)
T cd01334 145 AELERDLERLEEALKRLNVLPLGGGAVGTGANAP----PIDRERVAELLGFFG-PAPNSTQAVSDRDFLVELLSALALLA 219 (325)
T ss_pred HHHHHHHHHHHHHHHHhhhcCCcHhHHhCcCCCC----cchHHHHHHHhcCcC-cCcCHHHHHhCcHHHHHHHHHHHHHH
Confidence 9999999999999999999999977997654332 345579999999965 67899999999999999999999999
Q ss_pred HHHHHHHHHHHHhcCCCCCcceeEecCCC-CCCCCCCCCCCChhHHHHHHHHHHHhhhhhHHHhhhhcCcccccccchhh
Q 014483 245 ASLMKIANDVRLLGSGPRCGLGELILPEN-EPGSSIMPGKVNPTQCEALTMVCAQVIGNHVAITVGGSNGHFELNVFKPM 323 (423)
Q Consensus 245 ~~L~ria~Dl~~~~s~~r~e~gev~~~~~-~~gSS~MPqKrNP~~~E~i~~~a~~~~g~~~~~~~~~~~~~~e~~~~~~~ 323 (423)
++|+|||+|+++|+| +||||+.+|+. ++|||+|||||||+.+|+++++++++.|...+++....+.+++ +...|.
T Consensus 220 ~~l~ria~Dl~~~~~---~e~gev~~~~~~~~gSS~MP~KrNP~~~E~i~~~a~~~~g~~~~~~~~~~~~~~~-~~~~~~ 295 (325)
T cd01334 220 VSLSKIANDLRLLSS---GEFGEVELPDAKQPGSSIMPQKVNPVILELVRGLAGRVIGNLAALLEALKGGPLE-DNVDSP 295 (325)
T ss_pred HHHHHHHHHHHHHcC---CCCCeEECCCCCCCCcccCCCCCCCHHHHHHHHHHHHHhhHHHHHHHHHhcCchh-hhcccH
Confidence 999999999999996 58999999987 8999999999999999999999999999999998876666655 445566
Q ss_pred hHhhhhhHHHHHHHHHHHHHHHhhhCceeC
Q 014483 324 IASGLLHSLRLLGDASASFEKNCVRGIQAN 353 (423)
Q Consensus 324 ~~~~~l~~~~~~~~~~~~~~~~~l~~l~v~ 353 (423)
..|..++.+.......+..+..++++|+||
T Consensus 296 ~~~~~l~~~~~~~~~~l~~~~~~~~~l~v~ 325 (325)
T cd01334 296 VEREALPDSFDLLDAALRLLTGVLEGLEVN 325 (325)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCcCEeC
Confidence 667667666665555555556888999987
No 39
>PRK06389 argininosuccinate lyase; Provisional
Probab=100.00 E-value=2.9e-68 Score=535.12 Aligned_cols=355 Identities=14% Similarity=0.099 Sum_probs=299.8
Q ss_pred CHHHHHHHHHHHHHHHHHHHHcC-CCHHHHHHHHHHHHHHHccccCCCCcccccccCcccccccchHHHHHHHHHHHhCc
Q 014483 2 PEPIVRAFGILKKCAAKVNMEYG-LDPAIGKAIMQAAQEVAEGKLNDHFPLVVWQTGSGTQSNMNANEVIANRAAEILGH 80 (423)
Q Consensus 2 ~~~~~~~~~~ve~A~a~a~~~~g-ip~~~a~~I~~a~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ie~~l~~~~g~ 80 (423)
+.+.++..+.+..||+.++.+.| ||+++++.|.+++.++.+ +.|++++- .+|+|++ ||+++++++|
T Consensus 28 D~~l~~~di~~~~AH~~mL~~~gii~~~e~~~i~~~L~~i~~----~~~~~~~~----~EDvh~~----iE~~L~~~~G- 94 (434)
T PRK06389 28 DKNLIKYEIINLLAYHVALAQRRLITEKAPKCVINALIDIYK----NGIEIDLD----LEDVHTA----IENFVIRRCG- 94 (434)
T ss_pred HHHHHHHHHHHhHHHHHHHHHCCCCCHHHHHHHHHHHHHHHc----CCCcCCCC----CCchHHH----HHHHHHHHhc-
Confidence 35667788889999999999999 999999999999999975 34666542 4555555 8999999999
Q ss_pred cCCCcccccccccCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcceecccCCCCCcCCChhHHH
Q 014483 81 KRGEKIVHPNDHVNRSQSSNDTFPTVMHIAAAMETNSRLIPNLKVLHNSLHSKSVEFKDIVKIGRTHTQDATPLTLGQEF 160 (423)
Q Consensus 81 ~~g~~~~h~~~~v~~g~S~nDi~~Ta~~l~~~~~~~~~l~~~l~~l~~~L~~~A~~~~~~~m~grTh~Q~A~P~T~G~~~ 160 (423)
+.|+| +|+ ||||||++.|++||++|+++ ..+...+.+++++|+++ |.||+||||||+|||||+|||||+
T Consensus 95 ~~gg~-lht------gRSRNDqvat~~RL~~r~~~-~~~~~~l~~l~~~l~~~---~~dtimpGyTHlQ~AqP~TfG~~l 163 (434)
T PRK06389 95 DMFKN-FRL------FLSRNEQVHADLNLFIIDKI-IEIEKILYEIIKVIPGF---NLKGRLPGYTHFRQAMPMTVNTYI 163 (434)
T ss_pred hhhhh-hcc------cCCHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHH---ccCceeccccccCcCcchhHHHHH
Confidence 68899 996 99999999999999998775 69999999999999964 999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhhcccccccc-cCCCCCCCcchHHHHHHHHHHcCCCCCcCCchhHHhhhchH-HHHHHH
Q 014483 161 SGYTTQVKYGIDRVICCLPRMYQLAQGGTAV-GTGLNTKKGFDVKIASAVAEETSLPFVTAENKFEALAAHDA-FVETSG 238 (423)
Q Consensus 161 a~~~~~l~r~~~rL~~~~~r~~~~~lGg~A~-Gt~~~~~~~~~~~~~~~la~~LGl~~~~~~n~~da~~~rd~-~~e~~~ 238 (423)
++|+++|.|+++||.+++++++.+|||+|+. ||++++++ +++|++|||+. +..|+++++.++|+ ++++++
T Consensus 164 ~a~a~~L~rd~~RL~~~~~r~~~~pLGaga~~Gt~~~idr-------~~~A~lLGf~~-~~~n~~~a~~~~~~~~~e~~~ 235 (434)
T PRK06389 164 NYIKSILYHHINNLDSFLMDLREMPYGYGSGYGSPSSVKF-------NQMSELLGMEK-NIKNPVYSSSLYIKTIENISY 235 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhcchhhhhhhcCCchhhH-------HHHHHHhCCCC-CCCCCchhhhccchHHHHHHH
Confidence 9999999999999999999999999987775 99888765 48999999998 67888888677665 889999
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCcceeEecCCC-CCCCCCCCCCCChhHHHHHHHHHHHhhhhhHHHhhhhcCccccc
Q 014483 239 ALNTVAASLMKIANDVRLLGSGPRCGLGELILPEN-EPGSSIMPGKVNPTQCEALTMVCAQVIGNHVAITVGGSNGHFEL 317 (423)
Q Consensus 239 ~l~~~~~~L~ria~Dl~~~~s~~r~e~gev~~~~~-~~gSS~MPqKrNP~~~E~i~~~a~~~~g~~~~~~~~~~~~~~e~ 317 (423)
++++++++|+|||+|+++|+| + |++++|+. ++|||||||||||+.+|.++++|+++.|.++++.....+.+..+
T Consensus 236 ~la~la~~LsRiA~Dl~l~ss---~--g~ielpd~~~~GSSiMPqKrNP~~~E~ir~~a~~v~g~~~~~~~~~~n~~~~y 310 (434)
T PRK06389 236 LISSLAVDLSRICQDIIIYYE---N--GIITIPDEFTTGSSLMPNKRNPDYLELFQGIAAESISVLSFIAQSELNKTTGY 310 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHcC---C--CEEEecCCCCCCCCCCCCCcCcHHHHHHHHHHHHHHHHHHHHHHHHcCCcchh
Confidence 999999999999999999997 2 77888876 89999999999999999999999999999998877544443322
Q ss_pred ccchhhhHhhhhhHHHHHHHHHHHHHHHhhhCceeCHHHHHHHHHhhhhHHHhhcc-----cccHHHHHHHHHHHHHcCC
Q 014483 318 NVFKPMIASGLLHSLRLLGDASASFEKNCVRGIQANRERISKLLHESLMLVTSLNP-----KIGYDNAAAVAKKAHKEGT 392 (423)
Q Consensus 318 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~l~v~~~rm~~~l~~~~~~~~~la~-----~~g~~~a~~~~~~a~~~g~ 392 (423)
+.........+++.+..+..++..+. .++++++||+++ ++.. .++.++|++|+ .++|++||++|..++.++.
T Consensus 311 ~~D~q~~~~~~~~~~~~~~~~l~l~~-~~i~~l~~~~~~-~~a~-~~~~~ATdlA~~lv~~GipFR~AH~~Vg~~V~~~~ 387 (434)
T PRK06389 311 HRDFQIVKDSTISFINNFERILLGLP-DLLYNIKFEITN-EKNI-KNSVYATYNAWLAFKNGMDWKSAYAYIGNKIREGE 387 (434)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHhCeECHHH-Hhhc-cCCCcHHHHHHHHHHcCCCHHHHHHHHHHHHHhcc
Confidence 21111122456777777877777774 799999999999 5554 44455887764 3699999999999888887
Q ss_pred CHHH
Q 014483 393 TLKD 396 (423)
Q Consensus 393 ~l~e 396 (423)
-+..
T Consensus 388 ~~~~ 391 (434)
T PRK06389 388 VLDE 391 (434)
T ss_pred chhh
Confidence 6544
No 40
>PRK09285 adenylosuccinate lyase; Provisional
Probab=100.00 E-value=4.2e-68 Score=542.83 Aligned_cols=390 Identities=17% Similarity=0.143 Sum_probs=307.3
Q ss_pred CHHHHHHHHHHHHHHHHHHHHcC-C---CHHHHHH---HHHHHHHHHccccCCCCcccccccCcccccccchHHHHHHHH
Q 014483 2 PEPIVRAFGILKKCAAKVNMEYG-L---DPAIGKA---IMQAAQEVAEGKLNDHFPLVVWQTGSGTQSNMNANEVIANRA 74 (423)
Q Consensus 2 ~~~~~~~~~~ve~A~a~a~~~~g-i---p~~~a~~---I~~a~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ie~~l 74 (423)
+++++++|++||.|++.++++.| + |+..+++ |.+.+.++.. + ++..+.+.... ...++ ..++..+
T Consensus 29 ~~~~~~~~l~vE~A~a~a~a~~g~~~~ip~~~~~~~~~i~~~~~~~~~----~--d~~~i~~~e~~-~~hdv-~a~~~~l 100 (456)
T PRK09285 29 EFGLIRYRVQVEVEWLIALAAHPGIPEVPPFSAEANAFLRAIVENFSE----E--DAARIKEIERT-TNHDV-KAVEYFL 100 (456)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHHHhhCc----c--cHHHHHHHHHH-hCCCh-HHHHHHH
Confidence 46899999999999999999997 4 5555555 8776633210 0 11111110000 01111 1256778
Q ss_pred HHHhCc-----cCCCcccccccccCCCCChhhHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHhccCcceecccCC
Q 014483 75 AEILGH-----KRGEKIVHPNDHVNRSQSSNDTFPTVMHIAAAMETNSR-LIPNLKVLHNSLHSKSVEFKDIVKIGRTHT 148 (423)
Q Consensus 75 ~~~~g~-----~~g~~~~h~~~~v~~g~S~nDi~~Ta~~l~~~~~~~~~-l~~~l~~l~~~L~~~A~~~~~~~m~grTh~ 148 (423)
.+.+|. +.|+| +| +|+|||||+||+++|++++ .+.. +.+.|..++++|.++|++|+||+||||||+
T Consensus 101 ~~~~~~~~~~~~~~~~-vH------~G~Ts~Di~dTa~~L~lr~-~l~~~l~~~L~~l~~~L~~lA~~~~~t~m~grTH~ 172 (456)
T PRK09285 101 KEKLAGLPELEAVSEF-IH------FACTSEDINNLSHALMLKE-AREEVLLPALRELIDALKELAHEYADVPMLSRTHG 172 (456)
T ss_pred HHHhcccCcchhHHhH-cc------CCCChhhHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHcCCCeeeceecC
Confidence 889972 45666 66 5999999999999998865 5667 999999999999999999999999999999
Q ss_pred CCCcCCChhHHHHHHHHHHHHHHHHHHHHhhhhhhcccccccccCC-CCCC--Ccc-hHHHHHHHHHHcCCCCCcCCchh
Q 014483 149 QDATPLTLGQEFSGYTTQVKYGIDRVICCLPRMYQLAQGGTAVGTG-LNTK--KGF-DVKIASAVAEETSLPFVTAENKF 224 (423)
Q Consensus 149 Q~A~P~T~G~~~a~~~~~l~r~~~rL~~~~~r~~~~~lGg~A~Gt~-~~~~--~~~-~~~~~~~la~~LGl~~~~~~n~~ 224 (423)
|||+|||||||+++|+++|.|+++||.++ ...+++|| |+||. .+.. ++. +.++.+.+++.|||..++.+|+
T Consensus 173 Q~A~P~TfG~~~a~~~~~l~r~~~rL~~~---~~~g~~~G-AvGt~~a~~~~~~~~~~~~v~~~~~~~LGL~~~~~~~~- 247 (456)
T PRK09285 173 QPATPTTLGKEMANVAYRLERQLKQLEAV---EILGKING-AVGNYNAHLAAYPEVDWHAFSREFVESLGLTWNPYTTQ- 247 (456)
T ss_pred CCCeeehHHHHHHHHHHHHHHHHHHHHHH---HHhhhccc-ccccHHHHhhhcCCccHHHHHHHHHHHhCCCCCCCccc-
Confidence 99999999999999999999999999998 46677877 89984 2210 222 3578889999999986443332
Q ss_pred HHhhhchHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcceeEecCCCCCCCCCCCCCCChhHHHHHHHHHHHhhhhhH
Q 014483 225 EALAAHDAFVETSGALNTVAASLMKIANDVRLLGSGPRCGLGELILPENEPGSSIMPGKVNPTQCEALTMVCAQVIGNHV 304 (423)
Q Consensus 225 da~~~rd~~~e~~~~l~~~~~~L~ria~Dl~~~~s~~r~e~gev~~~~~~~gSS~MPqKrNP~~~E~i~~~a~~~~g~~~ 304 (423)
+++||+++++++++++++++|+|||+|+++|++ ..|++|. .+++++|||+|||||||+.+|+++++++.+.+...
T Consensus 248 --v~~rD~~~e~~~~la~~a~~L~kia~Di~ll~~--~~e~~e~-~~~~~~GSS~MPhKrNPv~~E~i~~~a~~~~~~~~ 322 (456)
T PRK09285 248 --IEPHDYIAELFDAVARFNTILIDLDRDVWGYIS--LGYFKQK-TKAGEIGSSTMPHKVNPIDFENSEGNLGLANALLE 322 (456)
T ss_pred --hhccHHHHHHHHHHHHHHHHHHHHHHHHHHHhC--chhhhcc-CCCCCCCCCCCCCCcCchHHHHHHHHHHHHHHHHH
Confidence 699999999999999999999999999999996 2344442 23568999999999999999999999999998876
Q ss_pred HHhhhhcCcccccccchhhhHhhhhhHHHHHHHHHHHHHHHhhhCceeCHHHHHHHHHhhhhHHH-----hhcccccHHH
Q 014483 305 AITVGGSNGHFELNVFKPMIASGLLHSLRLLGDASASFEKNCVRGIQANRERISKLLHESLMLVT-----SLNPKIGYDN 379 (423)
Q Consensus 305 ~~~~~~~~~~~e~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~l~v~~~rm~~~l~~~~~~~~-----~la~~~g~~~ 379 (423)
.++......++|++...|..+|.+ +.+..+...++..+..++++|+||++||++|+..++++.+ .|++ +|+++
T Consensus 323 ~~~~~~~~~~~eRD~~~~~~e~~~-~~~~~~~~~~l~~~~~~l~~L~V~~~rm~~nl~~~~~~~sE~~~~~l~~-~gr~~ 400 (456)
T PRK09285 323 HLAAKLPISRWQRDLTDSTVLRNL-GVAFGYSLIAYDSLLKGLGKLEVNEARLAEDLDANWEVLAEPIQTVMRR-YGIEN 400 (456)
T ss_pred HHHhhccHHhhCCcCchhhhhcch-HHHHHHHHHHHHHHHHHHccCEECHHHHHHHHHhcCcchHHHHHHHHHH-hChHh
Confidence 666544356789998888888888 7777766777777789999999999999999998888543 3555 89999
Q ss_pred HHHHHH----HHHHcCCCHHHH---HHHcCCCCHHHHhhccCcccccCC
Q 014483 380 AAAVAK----KAHKEGTTLKDA---ALKLGVLNSEEFDNLVVPEKMIGP 421 (423)
Q Consensus 380 a~~~~~----~a~~~g~~l~e~---~~~~~~l~~~~l~~~~dp~~~~g~ 421 (423)
||++|+ .+.++|.+|+|+ +.+++.++ ++| .+|||++|+|.
T Consensus 401 A~~~v~~~~~~~~~~~~~~~e~~~~l~~~~~~~-~~l-~~~~p~~ylg~ 447 (456)
T PRK09285 401 PYEKLKELTRGKRITAEALREFIDGLDLPEEAK-ARL-KALTPANYIGL 447 (456)
T ss_pred HHHHHHHHHHHHHhccCCHHHHHHHhcCCHhHH-HHH-HcCCHHHHHhh
Confidence 987665 556799999999 77665555 778 99999999985
No 41
>cd01598 PurB PurB_like adenylosuccinases (adenylsuccinate lyase, ASL). This subgroup contains EcASL, the product of the purB gene in Escherichia coli, and related proteins. It is a member of the Lyase class I family of the Lyase_I superfamily. Members of the Lyase class I family function as homotetramers to catalyze similar beta-elimination reactions in which a Calpha-N or Calpha-O bond is cleaved with the subsequent release of fumarate as one of the products. The four active sites of the homotetrameric enzyme are each formed by residues from three different subunits. ASL catalyzes two non-sequential steps in the de novo purine biosynthesis pathway: the conversion of 5-aminoimidazole-(N-succinylocarboxamide) ribotide (SAICAR) into 5-aminoimidazole-4-carboxamide ribotide (AICAR) and; the conversion of adenylsuccinate (SAMP) into adenosine monophosphate (AMP).
Probab=100.00 E-value=6.8e-67 Score=528.52 Aligned_cols=390 Identities=16% Similarity=0.116 Sum_probs=302.9
Q ss_pred CHHHHHHHHHHHHHHHHHHHHcC-CCH------HHHHHHHHHHHHHHccccCCCCcccccccCcccccccchHHHHHHHH
Q 014483 2 PEPIVRAFGILKKCAAKVNMEYG-LDP------AIGKAIMQAAQEVAEGKLNDHFPLVVWQTGSGTQSNMNANEVIANRA 74 (423)
Q Consensus 2 ~~~~~~~~~~ve~A~a~a~~~~g-ip~------~~a~~I~~a~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ie~~l 74 (423)
+++++++|++||.|++.+|++.| ||+ ++++.|.+++.... .+++..+.+... ....++. .++..+
T Consensus 7 ~~~~~~~~l~vE~ala~a~a~~g~Ip~~~~~~~~aa~~i~~~~~~~~------~~d~~~~~~~~~-~~~hdv~-al~~~l 78 (425)
T cd01598 7 EYALIKYRVQVEVEWLIALSNLEEIPEVPPLTKEELKFLRAIIENFS------EEDALRIKEIEA-TTNHDVK-AVEYFL 78 (425)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHHhhcC------ccCHHHHHHHHH-HHCCCcH-HHHHHH
Confidence 57999999999999999999999 999 99999999885310 011111110000 0011121 256788
Q ss_pred HHHhCc-----cCCCcccccccccCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcceecccCCC
Q 014483 75 AEILGH-----KRGEKIVHPNDHVNRSQSSNDTFPTVMHIAAAMETNSRLIPNLKVLHNSLHSKSVEFKDIVKIGRTHTQ 149 (423)
Q Consensus 75 ~~~~g~-----~~g~~~~h~~~~v~~g~S~nDi~~Ta~~l~~~~~~~~~l~~~l~~l~~~L~~~A~~~~~~~m~grTh~Q 149 (423)
++.+|+ +.++| +| +|+|||||+||+++|++++.+.+.+.+.|..++++|.++|++|+||+||||||+|
T Consensus 79 ~~~~g~~~~~~~~~~~-vH------~G~TsnDi~dTa~~L~lr~~l~~~l~~~L~~l~~~L~~lA~~~~dt~m~GrTH~Q 151 (425)
T cd01598 79 KEKFETLGLLKKIKEF-IH------FACTSEDINNLAYALMIKEARNEVILPLLKEIIDSLKKLAKEYADVPMLSRTHGQ 151 (425)
T ss_pred HHHhcccccchhhhhH-hc------cCCChhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCeeecccCCc
Confidence 888873 34555 66 5999999999999998876543567899999999999999999999999999999
Q ss_pred CCcCCChhHHHHHHHHHHHHHHHHHHHHhhhhhhcccccccccCCCCCC---Ccc-hHHHHHHHHHHcCCCCCcCCchhH
Q 014483 150 DATPLTLGQEFSGYTTQVKYGIDRVICCLPRMYQLAQGGTAVGTGLNTK---KGF-DVKIASAVAEETSLPFVTAENKFE 225 (423)
Q Consensus 150 ~A~P~T~G~~~a~~~~~l~r~~~rL~~~~~r~~~~~lGg~A~Gt~~~~~---~~~-~~~~~~~la~~LGl~~~~~~n~~d 225 (423)
||||||||||+++|+++|.|+++||.++ ...+++|| ++||..... +++ +..+.+.+++.|||..++.+|+
T Consensus 152 ~A~P~TfG~~~a~w~~~L~r~~~RL~~~---~~~g~~gG-avGt~~~~~~~~~~~~~~~~~~~~a~~LgL~~~~~~~~-- 225 (425)
T cd01598 152 PATPTTLGKELAVFVYRLERQYKQLKQI---EILGKFNG-AVGNFNAHLVAYPDVDWRKFSEFFVTSLGLTWNPYTTQ-- 225 (425)
T ss_pred cCeehhHHHHHHHHHHHHHHHHHHHHHH---HHhheeeC-chhhhhhhhhccCcccHHHHHHHHHHHhCcCCCCcccc--
Confidence 9999999999999999999999999998 35566877 899843221 222 4688999999999997665542
Q ss_pred HhhhchHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcceeEec--CCCCCCCCCCCCCCChhHHHHHHHHHHHhhhhh
Q 014483 226 ALAAHDAFVETSGALNTVAASLMKIANDVRLLGSGPRCGLGELIL--PENEPGSSIMPGKVNPTQCEALTMVCAQVIGNH 303 (423)
Q Consensus 226 a~~~rd~~~e~~~~l~~~~~~L~ria~Dl~~~~s~~r~e~gev~~--~~~~~gSS~MPqKrNP~~~E~i~~~a~~~~g~~ 303 (423)
+++||+++|+++++++++++|+|||+|+++|++ + ||+.+ +++++|||+|||||||+.+|+++++++.+.+..
T Consensus 226 -v~~rD~~~e~~~~La~la~~L~kia~Di~ll~s---~--ge~~e~~~~~~~GSS~MPhKrNPv~~E~i~~~a~~a~~~~ 299 (425)
T cd01598 226 -IEPHDYIAELFDALARINTILIDLCRDIWGYIS---L--GYFKQKVKKGEVGSSTMPHKVNPIDFENAEGNLGLSNALL 299 (425)
T ss_pred -hhccHHHHHHHHHHHHHHHHHHHHHHHHHHHhC---C--cceeecCCCCCCCcCCCCCCcCchHHHHHHHHHHHHHHHH
Confidence 699999999999999999999999999999996 3 44554 346899999999999999999999999998887
Q ss_pred HHHhhhhcCcccccccchhhhHhhhhhHHHHHHHHHHHHHHHhhhCceeCHHHHHHHHHhhhhHHHh-----hcccccHH
Q 014483 304 VAITVGGSNGHFELNVFKPMIASGLLHSLRLLGDASASFEKNCVRGIQANRERISKLLHESLMLVTS-----LNPKIGYD 378 (423)
Q Consensus 304 ~~~~~~~~~~~~e~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~l~v~~~rm~~~l~~~~~~~~~-----la~~~g~~ 378 (423)
..++......+++++...|..+|.+ +.+..+...++..+..++++|+||++||++|+..+++++++ |++ +|++
T Consensus 300 ~~~~~~~~~~~~eRD~~~~~~e~~~-~~~~~~~~~al~~~~~ll~~L~v~~~rm~~nl~~~~~i~sE~~~~~l~~-~gr~ 377 (425)
T cd01598 300 NHLSAKLPISRLQRDLTDSTVLRNI-GVAFGHSLIAYKSLLRGLDKLELNEARLLEDLDANWEVLAEPIQTVMRR-YGIP 377 (425)
T ss_pred HHHHhhhhhhhhcccccchhhhccH-HHHHHHHHHHHHHHHHHHccCEECHHHHHHHHHhCcCHHHHHHHHHHHh-cChH
Confidence 6666544366789998888888888 77777667777777899999999999999999998886543 455 8999
Q ss_pred HHHHHHHHHHH-cCCCHHHHHHHc--CCCCHHHHh--hccCcccccC
Q 014483 379 NAAAVAKKAHK-EGTTLKDAALKL--GVLNSEEFD--NLVVPEKMIG 420 (423)
Q Consensus 379 ~a~~~~~~a~~-~g~~l~e~~~~~--~~l~~~~l~--~~~dp~~~~g 420 (423)
+||++|.++.. .+.+..+...-- -..+++.-+ -.+.|.+|+|
T Consensus 378 ~Ah~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 424 (425)
T cd01598 378 NPYEKLKDLTRGKRIDKETLKEFIDSLDIPEEAKAELLALTPANYIG 424 (425)
T ss_pred hHHHHHHHHhCCCCCCHHHHHHHHHhCCCCHHHHHHHHhCCccccCC
Confidence 99999987655 334333332211 123333112 2478999998
No 42
>PRK05975 3-carboxy-cis,cis-muconate cycloisomerase; Provisional
Probab=100.00 E-value=3.1e-67 Score=521.40 Aligned_cols=321 Identities=19% Similarity=0.230 Sum_probs=278.8
Q ss_pred CHHHHHHHHHHHHHHHHHHHHcC-CCHHHHHHHHHHHHHHHccccCCCCcccccccCcccccccchHHHHHHHHHHHhCc
Q 014483 2 PEPIVRAFGILKKCAAKVNMEYG-LDPAIGKAIMQAAQEVAEGKLNDHFPLVVWQTGSGTQSNMNANEVIANRAAEILGH 80 (423)
Q Consensus 2 ~~~~~~~~~~ve~A~a~a~~~~g-ip~~~a~~I~~a~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ie~~l~~~~g~ 80 (423)
+++++++|++||+|+|.+|.+.| ||++++++|.++|+++.. +...+.++... ..+++++++ ..+.+.+|+
T Consensus 26 ~~~~i~a~l~vE~A~a~a~~~~G~Ip~~~a~~I~~a~~~~~~-------d~~~~~~~~~~-~g~~v~~~v-~~l~~~~g~ 96 (351)
T PRK05975 26 AEADIAAMLAFEAALAEAEAEHGIIPAEAAERIAAACETFEP-------DLAALRHATAR-DGVVVPALV-RQLRAAVGE 96 (351)
T ss_pred cHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHhccCCC-------CHHHHhhHHHh-cCCcHHHHH-HHHHHHhCc
Confidence 67999999999999999999999 999999999999976421 11111111000 113444544 567778886
Q ss_pred cCCCcccccccccCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcceecccCCCCCcCCChhHHH
Q 014483 81 KRGEKIVHPNDHVNRSQSSNDTFPTVMHIAAAMETNSRLIPNLKVLHNSLHSKSVEFKDIVKIGRTHTQDATPLTLGQEF 160 (423)
Q Consensus 81 ~~g~~~~h~~~~v~~g~S~nDi~~Ta~~l~~~~~~~~~l~~~l~~l~~~L~~~A~~~~~~~m~grTh~Q~A~P~T~G~~~ 160 (423)
+.|+| +| +|+|||||+||+++|++++ .+..+.+.|..++++|.++|++|+||+||||||+|||||||||||+
T Consensus 97 ~~~~~-vH------~G~TsnDi~dTa~~L~lr~-~l~~l~~~L~~l~~~L~~lA~~~~~t~m~grTH~Q~A~P~TfG~~~ 168 (351)
T PRK05975 97 EAAAH-VH------FGATSQDVIDTSLMLRLKA-ASEILAARLGALIARLDALEATFGQNALMGHTRMQAAIPITVADRL 168 (351)
T ss_pred hhhCc-cc------CCCChhhHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhCCCeeecccCCCcCeehhHHHHH
Confidence 66666 66 5999999999999988755 5689999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhhcccccccccCCCCCCCcchHHHHHHHHHHcCCCCCcCCchhHHhhhchHHHHHHHHH
Q 014483 161 SGYTTQVKYGIDRVICCLPRMYQLAQGGTAVGTGLNTKKGFDVKIASAVAEETSLPFVTAENKFEALAAHDAFVETSGAL 240 (423)
Q Consensus 161 a~~~~~l~r~~~rL~~~~~r~~~~~lGg~A~Gt~~~~~~~~~~~~~~~la~~LGl~~~~~~n~~da~~~rd~~~e~~~~l 240 (423)
++|+++|.|+++||.+++++++.+|||| |+||+.+. +.++..+++++++.|||+.++ +|+++||+++++++++
T Consensus 169 a~~~~~l~r~~~rL~~~~~~~~~~~lGG-AvGt~~~~-~~~~~~~~~~~a~~LGl~~~~-----~~~~~rD~~~e~~~~l 241 (351)
T PRK05975 169 ASWRAPLLRHRDRLEALRADVFPLQFGG-AAGTLEKL-GGKAAAVRARLAKRLGLEDAP-----QWHSQRDFIADFAHLL 241 (351)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhcCCcc-HhccCccC-CCcHHHHHHHHHHHhCcCCCc-----chhhccHHHHHHHHHH
Confidence 9999999999999999999999999999 89997664 445678999999999997532 2679999999999999
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCcceeEecCCCCCCCCCCCCCCChhHHHHHHHHHHHhhhhhHHHhhhhcCcccccccc
Q 014483 241 NTVAASLMKIANDVRLLGSGPRCGLGELILPENEPGSSIMPGKVNPTQCEALTMVCAQVIGNHVAITVGGSNGHFELNVF 320 (423)
Q Consensus 241 ~~~~~~L~ria~Dl~~~~s~~r~e~gev~~~~~~~gSS~MPqKrNP~~~E~i~~~a~~~~g~~~~~~~~~~~~~~e~~~~ 320 (423)
++++++|+|||+|+++|+| +| ||+.+|. ++|||||||||||+.+|.++++++.+.+...++.. ....++|++..
T Consensus 242 a~la~~l~kiA~Di~ll~s---~e-gev~~~~-~~GSS~MPhKrNPv~~E~i~~~ar~~~~~~~~~~~-~~~~~~er~~~ 315 (351)
T PRK05975 242 SLVTGSLGKFGQDIALMAQ---AG-DEISLSG-GGGSSAMPHKQNPVAAETLVTLARFNATQVSGLHQ-ALVHEQERSGA 315 (351)
T ss_pred HHHHHHHHHHHHHHHHHhC---CC-CcccCCC-CCccCCCCCCcCcHHHHHHHHHHHHHHHHHHHHHh-cccchhccCCc
Confidence 9999999999999999995 69 9999997 59999999999999999999999999998776665 57789999999
Q ss_pred hhhhHhhhhhHHHHHHHHHHHHHHHhhhCcee
Q 014483 321 KPMIASGLLHSLRLLGDASASFEKNCVRGIQA 352 (423)
Q Consensus 321 ~~~~~~~~l~~~~~~~~~~~~~~~~~l~~l~v 352 (423)
.|..+|..+|+++.+.++++..+..++++|++
T Consensus 316 ~~~~e~~~lp~~~~~~~~~l~~~~~ll~~l~~ 347 (351)
T PRK05975 316 AWTLEWMILPQMVAATGAALRLALELAGNIRR 347 (351)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHh
Confidence 99999999999999999999998999999865
No 43
>PLN02848 adenylosuccinate lyase
Probab=100.00 E-value=1.8e-64 Score=515.32 Aligned_cols=389 Identities=16% Similarity=0.134 Sum_probs=302.1
Q ss_pred CHHHHHHHHHHHHHHHHHHHHcC-C---CH---HHHHHHHHHHHHHHccccCCCCcccccccCcccccccchHHHHHHHH
Q 014483 2 PEPIVRAFGILKKCAAKVNMEYG-L---DP---AIGKAIMQAAQEVAEGKLNDHFPLVVWQTGSGTQSNMNANEVIANRA 74 (423)
Q Consensus 2 ~~~~~~~~~~ve~A~a~a~~~~g-i---p~---~~a~~I~~a~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ie~~l 74 (423)
+++++++|++||.|++.++++.| | |+ ++++.|.+++.++.. + ++..+.+.. .....++.. ++..+
T Consensus 32 d~a~~~~~l~vE~ala~a~a~~g~i~~~P~i~~~aa~~i~~~~~~~~~----~--d~~~~~~~e-~~t~hdv~a-~~~~l 103 (458)
T PLN02848 32 EFGLIRYRVLVEVKWLLKLSQIPEVTEVPPFSDEANSFLEGIIAGFSV----D--DALEVKKIE-RVTNHDVKA-VEYFL 103 (458)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHHHhcCH----h--hHHHHHHHH-HHhCCCcHH-HHHHH
Confidence 47899999999999999999999 9 88 999999988732200 0 011000000 001122222 36777
Q ss_pred HHHhCc--c---CCCcccccccccCCCCChhhHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHhccCcceecccCC
Q 014483 75 AEILGH--K---RGEKIVHPNDHVNRSQSSNDTFPTVMHIAAAMETNSR-LIPNLKVLHNSLHSKSVEFKDIVKIGRTHT 148 (423)
Q Consensus 75 ~~~~g~--~---~g~~~~h~~~~v~~g~S~nDi~~Ta~~l~~~~~~~~~-l~~~l~~l~~~L~~~A~~~~~~~m~grTh~ 148 (423)
.++++. + .++| +| +|+|||||+||+++|++++ ++.. +.+.|..++++|.++|++|+|++|+||||+
T Consensus 104 ~~~~~~~~~~~~~~~~-vH------~G~TsqDi~dTa~~L~lr~-a~~~~l~~~L~~l~~aL~~lA~~~~dt~m~GRTH~ 175 (458)
T PLN02848 104 KQKCKSHPELAKVLEF-FH------FACTSEDINNLSHALMLKE-GVNSVVLPTMDEIIKAISSLAHEFAYVPMLSRTHG 175 (458)
T ss_pred HHHhccccchhhhhCc-cc------CCCCHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHhcCCeeeccccC
Confidence 888862 2 3355 55 6999999999999998865 4567 999999999999999999999999999999
Q ss_pred CCCcCCChhHHHHHHHHHHHHHHHHHHHHhhhhhhcccccccccCCCCC---CCcc-hHHHHHHHHHHcCCCCCcCCchh
Q 014483 149 QDATPLTLGQEFSGYTTQVKYGIDRVICCLPRMYQLAQGGTAVGTGLNT---KKGF-DVKIASAVAEETSLPFVTAENKF 224 (423)
Q Consensus 149 Q~A~P~T~G~~~a~~~~~l~r~~~rL~~~~~r~~~~~lGg~A~Gt~~~~---~~~~-~~~~~~~la~~LGl~~~~~~n~~ 224 (423)
|||+|||||+|+++|+++|.|+++||.++. ..+++|| |+||.... .+++ +..+.+.+++.|||...+..
T Consensus 176 Q~A~PiTfG~~~a~w~~~L~r~~~rL~~~~---l~g~~~G-AvGt~aa~~~~~~~~d~~~v~~~la~~LGL~~~~~~--- 248 (458)
T PLN02848 176 QPASPTTLGKEMANFAYRLSRQRKQLSEVK---IKGKFAG-AVGNYNAHMSAYPEVDWPAVAEEFVTSLGLTFNPYV--- 248 (458)
T ss_pred ccceeehHHHHHHHHHHHHHHHHHHHHHHH---hccEeec-ccchhhhhhhccCCCCHHHHHHHHHHHhCCCCCCch---
Confidence 999999999999999999999999998872 3477777 78875332 1334 36899999999999852222
Q ss_pred HHhhhchHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcceeEecC--CCCCCCCCCCCCCChhHHHHHHHHHHHhhhh
Q 014483 225 EALAAHDAFVETSGALNTVAASLMKIANDVRLLGSGPRCGLGELILP--ENEPGSSIMPGKVNPTQCEALTMVCAQVIGN 302 (423)
Q Consensus 225 da~~~rd~~~e~~~~l~~~~~~L~ria~Dl~~~~s~~r~e~gev~~~--~~~~gSS~MPqKrNP~~~E~i~~~a~~~~g~ 302 (423)
+.+++||+++++++++++++++|+|||+|++.++ |+||+.++ ++++|||||||||||+.+|+++++++.+.|.
T Consensus 249 ~~v~~rD~~~e~~~~La~~a~~l~kia~Di~~~~-----e~ge~~e~~~~~~~GSS~MP~KrNPv~~E~i~~~a~~~~~~ 323 (458)
T PLN02848 249 TQIEPHDYMAELFNAVSRFNNILIDFDRDIWSYI-----SLGYFKQITKAGEVGSSTMPHKVNPIDFENSEGNLGLANAE 323 (458)
T ss_pred hhHhccHHHHHHHHHHHHHHHHHHHHHHHHHhhh-----hcCCcccccCCCCCCcCCCCCCcCcHHHHHHHHHHHHHHHH
Confidence 2369999999999999999999999999988777 57777655 3589999999999999999999999999999
Q ss_pred hHHHhhhhcCcccccccchhhhHhhhhhHHHHHHHHHHHHHHHhhhCceeCHHHHHHHHHhhhhHHH-----hhcccccH
Q 014483 303 HVAITVGGSNGHFELNVFKPMIASGLLHSLRLLGDASASFEKNCVRGIQANRERISKLLHESLMLVT-----SLNPKIGY 377 (423)
Q Consensus 303 ~~~~~~~~~~~~~e~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~l~v~~~rm~~~l~~~~~~~~-----~la~~~g~ 377 (423)
+..++...+.+++|++...|..+|.+ +.+......+...+..++++|+||++||++|+..++++.+ .|++ +|+
T Consensus 324 ~~~~~~~~~~~~~eRD~~~s~~e~~~-~~~~~~~~~al~~~~~~l~~L~v~~~rm~~nl~~~~~~~sE~~~~~l~~-~G~ 401 (458)
T PLN02848 324 LSHLSMKLPISRMQRDLTDSTVLRNM-GVGLGHSLLAYKSTLRGIGKLQVNEARLAEDLDQTWEVLAEPIQTVMRR-YGV 401 (458)
T ss_pred HHHHHhcCcchhhccccchhhhhccH-HHHHHHHHHHHHHHHHHHccCEECHHHHHHHHHccchhHHHHHHHHHHH-hCh
Confidence 99988755777899998888888888 7766666666666678999999999999999999888753 3455 899
Q ss_pred HHHHHHHHHHHH-cCCC---HHHHHHHcCCCCHHHHhhc--cCcccccCC
Q 014483 378 DNAAAVAKKAHK-EGTT---LKDAALKLGVLNSEEFDNL--VVPEKMIGP 421 (423)
Q Consensus 378 ~~a~~~~~~a~~-~g~~---l~e~~~~~~~l~~~~l~~~--~dp~~~~g~ 421 (423)
++||++++.+.. +..+ +++.+.. -.++++..+++ +.|.+|+|-
T Consensus 402 ~~A~e~v~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~~~~~y~g~ 450 (458)
T PLN02848 402 PEPYEKLKELTRGRAVTKESMREFIEG-LELPEEAKDQLLKLTPHTYIGA 450 (458)
T ss_pred HHHHHHHHHHHHHccCCHHHHHHHHHH-cCCCHHHHHHHHhCCchhhhch
Confidence 999999986554 3442 2222221 12554444443 789999984
No 44
>PF00206 Lyase_1: Lyase; InterPro: IPR022761 This entry represents the N-terminal region of lyase-1 family; PDB: 1DOF_C 1K62_B 1AOS_B 2VD6_D 2J91_B 1C3U_B 1C3C_A 3R6Y_C 3R6V_F 3R6Q_F ....
Probab=100.00 E-value=8.5e-63 Score=484.97 Aligned_cols=286 Identities=31% Similarity=0.414 Sum_probs=234.6
Q ss_pred HHHHHHHHH-----HHHHHHHHHHHcC-CCHHHHHHHHHHHHHHHc-cccCCCCcccccccCcccccccchHHHHHHHHH
Q 014483 3 EPIVRAFGI-----LKKCAAKVNMEYG-LDPAIGKAIMQAAQEVAE-GKLNDHFPLVVWQTGSGTQSNMNANEVIANRAA 75 (423)
Q Consensus 3 ~~~~~~~~~-----ve~A~a~a~~~~g-ip~~~a~~I~~a~~~i~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ie~~l~ 75 (423)
++.++.|+. ++.|+++|+++.| ||++++++|.++|+++.+ ....+.|+++..+++. +.. ++..+.
T Consensus 17 ~~~~~~~l~~~~~~~e~a~~~a~a~~g~i~~~~a~~I~~a~~~i~~~~~~~~~~~~~~~~~~~----~~~----~~~~l~ 88 (312)
T PF00206_consen 17 RARFDFWLAEYDIRVEAALAKALAEAGIIPKEAADAIVKALEEILEDGDLDDAFELDEIEEDI----GHA----VEANLN 88 (312)
T ss_dssp HHHHHHHHHSHHHHHHHHHHHHHHHTTSSTHHHHHHHHHHHHHHHHHTCTHGHHHHCSCSSSH----HHH----HHHHHH
T ss_pred HHHhCCEeeccHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHhhccccccchhhhhccc----hhH----HHHHHH
Confidence 577889999 9999999999999 999999999999999886 3333356676654433 333 333333
Q ss_pred HHhCccCCCcccccccccCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcceecccCCCCCcCCC
Q 014483 76 EILGHKRGEKIVHPNDHVNRSQSSNDTFPTVMHIAAAMETNSRLIPNLKVLHNSLHSKSVEFKDIVKIGRTHTQDATPLT 155 (423)
Q Consensus 76 ~~~g~~~g~~~~h~~~~v~~g~S~nDi~~Ta~~l~~~~~~~~~l~~~l~~l~~~L~~~A~~~~~~~m~grTh~Q~A~P~T 155 (423)
+.+++..+.. .+.+.|||+|+|||||++|+++|++++.++..|.+.|..++++|.++|++|++|+||||||+|||+|||
T Consensus 89 ~~~~e~~~~~-~~~~~~vH~G~Ts~Di~~Ta~~l~lr~~~~~~l~~~l~~l~~~L~~~a~~~~~t~~~grTh~Q~A~P~T 167 (312)
T PF00206_consen 89 EVLGELLGEP-PEAGGWVHYGRTSNDIVDTALRLQLRDALLELLLERLKALIDALAELAEEHKDTPMPGRTHGQPAQPTT 167 (312)
T ss_dssp HHHHHHHTHS-SGGGGGTTTT--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTSEEEEEETTEEEEEEE
T ss_pred HHhhhhhhcc-ccccccccCCCcHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhhcCceecccccccccccee
Confidence 4443111112 345556667999999999999999876544679999999999999999999999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHhhhhhhcccccccc-cCCCCCCCcchHHHHHHHHHHcCCCCCcCCchhHHhhhchHHH
Q 014483 156 LGQEFSGYTTQVKYGIDRVICCLPRMYQLAQGGTAV-GTGLNTKKGFDVKIASAVAEETSLPFVTAENKFEALAAHDAFV 234 (423)
Q Consensus 156 ~G~~~a~~~~~l~r~~~rL~~~~~r~~~~~lGg~A~-Gt~~~~~~~~~~~~~~~la~~LGl~~~~~~n~~da~~~rd~~~ 234 (423)
||+|+++|+++|.|+++||.+++++++.+|||||+. ||+++.++.+...+.+.|++.+||. .+..|.++++++||+++
T Consensus 168 ~G~~~a~~~~~l~r~~~rL~~~~~~~~~~~lgga~g~gt~~~~~~~~~~~~~~~L~~~~~l~-~~~~~~~~~~~~rd~~~ 246 (312)
T PF00206_consen 168 FGHKLAAWADELARDLERLEEARKRLNVSPLGGAVGAGTSLGIDREFQERVAEELGEFTGLG-VPAPNWHDAVSSRDRLA 246 (312)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHEEETTTTTTTSSHTTSHHHHHHHHHHHHHHHHCST-EECSSHHHHHHCTHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhHhHHHHHhccCCCccccccccCcchhhhHHhhhhhhhhcc-cchhhcccccccchHHH
Confidence 999999999999999999999999999999999543 6666665554445555555555565 36788899999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCCCcceeEecCC--CCCCCCCCCCCCChhHHHHHHHHHHHhhh
Q 014483 235 ETSGALNTVAASLMKIANDVRLLGSGPRCGLGELILPE--NEPGSSIMPGKVNPTQCEALTMVCAQVIG 301 (423)
Q Consensus 235 e~~~~l~~~~~~L~ria~Dl~~~~s~~r~e~gev~~~~--~~~gSS~MPqKrNP~~~E~i~~~a~~~~g 301 (423)
++++++++++++|+|||+|+++|+| +|+|++++|. +++|||+|||||||+.+|+++++|++++|
T Consensus 247 e~~~~l~~l~~~l~kia~Dl~~~~s---~e~g~~~~~~~~~~~GSS~MP~K~NP~~~E~i~~~a~~v~G 312 (312)
T PF00206_consen 247 ELASALALLAGTLSKIAEDLRLLSS---TEIGEVEEPFPEGQVGSSIMPHKRNPVILENIRGLARQVIG 312 (312)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTS---TTTSSEEEEGGGSSSCSSSSTTCEETHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhC---CceeeeecccccccCCCccCCCCCCCHHHHHHHHhhhcCcC
Confidence 9999999999999999999999996 5799999874 46699999999999999999999999987
No 45
>KOG2700 consensus Adenylosuccinate lyase [Nucleotide transport and metabolism]
Probab=100.00 E-value=1.5e-43 Score=344.54 Aligned_cols=392 Identities=19% Similarity=0.154 Sum_probs=311.7
Q ss_pred HHHHHHHHHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHHccccCCCCcccccccCcccccccchHHHHHHHHHHHhCc
Q 014483 4 PIVRAFGILKKCAAKVNMEYG---LDPAIGKAIMQAAQEVAEGKLNDHFPLVVWQTGSGTQSNMNANEVIANRAAEILGH 80 (423)
Q Consensus 4 ~~~~~~~~ve~A~a~a~~~~g---ip~~~a~~I~~a~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ie~~l~~~~g~ 80 (423)
+.++.|-+++.-+|.+..+.| ||+++++++...++--. ..|+.-.-.++. +..+|-.. .+.+.+.|..
T Consensus 28 ~~~~twr~lw~~lA~ae~~lgL~~itk~ai~e~~s~~~~e~-----~d~~~l~~ee~r---~~hdVmah-vh~~~~~cp~ 98 (481)
T KOG2700|consen 28 NKFSTWRRLWLWLAEAEKELGLTTITKEAIEEMKSSRDIEN-----IDFTALSPEEGR---YRHDVMAH-VHSFGELCPI 98 (481)
T ss_pred hhhhhhhHHHHhhhhhhhcCCcccchHHHHHHHHhhccccc-----cchhhcChhhhh---hcccHHHH-HHHHHhhcch
Confidence 456677777777777766555 89999999988665211 112111111110 01222222 2345666664
Q ss_pred cCCCcccccccccCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcceecccCCCCCcCCChhHHH
Q 014483 81 KRGEKIVHPNDHVNRSQSSNDTFPTVMHIAAAMETNSRLIPNLKVLHNSLHSKSVEFKDIVKIGRTHTQDATPLTLGQEF 160 (423)
Q Consensus 81 ~~g~~~~h~~~~v~~g~S~nDi~~Ta~~l~~~~~~~~~l~~~l~~l~~~L~~~A~~~~~~~m~grTh~Q~A~P~T~G~~~ 160 (423)
..++ +|. |+|+.++.|.+..+.+ +.+.+.+.+.|...++.+...+.+|++++|.||||.|+|+|+|||++.
T Consensus 99 -aagi-ihl------gatsc~vtdnadli~~-rd~~k~i~~~l~~vIdrls~~~~~~k~~~~~g~Th~q~A~l~tfgkr~ 169 (481)
T KOG2700|consen 99 -AAGI-IHL------GATSCFVTDNADLIEL-RDASKLILPYLAGVIDRLSQFADKYKEKPTLGRTHLQPAQLTTFGKRM 169 (481)
T ss_pred -hcce-EEe------eeeeeeecCCccceec-hhHHHHHHHHHHHHHHHHHHHHHHhccceecccccCccchhhHHHHHH
Confidence 3446 774 9999999999997666 456899999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhhcccccccccCCCCCCC------cchHHHHHHHHHHcCCCCCcCCchhHHhhhchHHH
Q 014483 161 SGYTTQVKYGIDRVICCLPRMYQLAQGGTAVGTGLNTKK------GFDVKIASAVAEETSLPFVTAENKFEALAAHDAFV 234 (423)
Q Consensus 161 a~~~~~l~r~~~rL~~~~~r~~~~~lGg~A~Gt~~~~~~------~~~~~~~~~la~~LGl~~~~~~n~~da~~~rd~~~ 234 (423)
.-|..+|.+++++|..+++++....++| |.||-.+... +.-..+-+.+++.+||..+.+.+ ..+.+|+...
T Consensus 170 ~~~~qel~~~l~~f~~~~~~~~~~~~kg-a~gtqasf~~l~~~~~~kv~~ld~Lv~k~~gf~~~~~~T--GQt~sr~~~~ 246 (481)
T KOG2700|consen 170 CLWIQELLRDLERFHRARTDVRFRGLKG-ATGTQASFLSLFLGDMDKVEKLDSLVTKELGFVPMYIVT--GQTYSRKTDA 246 (481)
T ss_pred HHHHHHHHHHHHHHHHhhhhhhcccccc-chhhHHHHHHhhcccHHHHHHHHHHHHHHhCCCcccccc--CCcCCchhHH
Confidence 9999999999999999999999999999 8998433221 12234556788999999865555 2478899999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCCCcceeEecCC--CCCCCCCCCCCCChhHHHHHHHHHHHhhhhhHHHhhhhcC
Q 014483 235 ETSGALNTVAASLMKIANDVRLLGSGPRCGLGELILPE--NEPGSSIMPGKVNPTQCEALTMVCAQVIGNHVAITVGGSN 312 (423)
Q Consensus 235 e~~~~l~~~~~~L~ria~Dl~~~~s~~r~e~gev~~~~--~~~gSS~MPqKrNP~~~E~i~~~a~~~~g~~~~~~~~~~~ 312 (423)
++.+.|++++++..|+|.|+++++. |+|+.+|. .+.|||+||+||||+.+|++.++++.+.++.+..+...+-
T Consensus 247 ~~~~~la~lgat~~k~~Tdirll~~-----~~ev~epFea~q~gsSaMp~krNpm~~E~itslar~l~~~v~~al~~~~~ 321 (481)
T KOG2700|consen 247 EEVAPLASLGATAHKYATDIRLLAK-----FAEVEEPFEAHQIGSSAMPYKRNPMRCERITSLARHLRPYVTQALNTASV 321 (481)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH-----HHHhhccccccccccccCCCCCCCchhHHHhHHHHHHHHHHHHHhhhHHH
Confidence 9999999999999999999999994 99999994 4899999999999999999999999999998888876677
Q ss_pred cccccccchhhhHhhhhhHHHHHHHHHHHHHHHhhhCceeCHHHHHHHHHhhhhHH------Hhhccccc-HHHHHHHH-
Q 014483 313 GHFELNVFKPMIASGLLHSLRLLGDASASFEKNCVRGIQANRERISKLLHESLMLV------TSLNPKIG-YDNAAAVA- 384 (423)
Q Consensus 313 ~~~e~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~l~v~~~rm~~~l~~~~~~~------~~la~~~g-~~~a~~~~- 384 (423)
.|+|+....|.+.|.++|..+...++.+.....++.|+.|.+++|++|++...+++ ++|.+..+ |++||+.+
T Consensus 322 qw~Ertl~dSa~~rivlP~~Fl~ad~~L~~~~ni~~gl~v~p~~i~r~i~~e~~~~~~eni~mAL~~~g~srq~ahe~I~ 401 (481)
T KOG2700|consen 322 QWHERTLDDSANRRIVLPDAFLTADGNLGTLLNILEGLVVYPKVIERNIRDELPFMVLENIIMALVKAGLSRQEAHEGIR 401 (481)
T ss_pred HHhhcccccccccceechHHHHHHHHHHHHHHHHHhhcccccHHHHHHHHhhhhHHHHHHHHHHHHHhcccHHHHHHHHH
Confidence 88998877888888899999999999999656899999999999999998765543 56777665 88888633
Q ss_pred ---HHH----HHcCCCHHHHHH--Hc--CCCCHHHHhhccCcccccCC
Q 014483 385 ---KKA----HKEGTTLKDAAL--KL--GVLNSEEFDNLVVPEKMIGP 421 (423)
Q Consensus 385 ---~~a----~~~g~~l~e~~~--~~--~~l~~~~l~~~~dp~~~~g~ 421 (423)
..+ .++|.++.+..+ ++ .....+|++.+|||.+|+|+
T Consensus 402 ~L~~~a~~~v~~e~g~~~~ie~~k~~~~~~~v~ee~~~ll~p~~f~gr 449 (481)
T KOG2700|consen 402 KLSHQAAQVVKQEGGDNDLIERAKEDPTFKPVKEELDSLLDPLNFTGR 449 (481)
T ss_pred HHHHHHHHHHHHhcCCcHHHHHhcccccccchHHHHHhhccchhcccc
Confidence 344 678888766544 33 35668999999999999986
No 46
>cd01594 Lyase_I_like Lyase class I_like superfamily: contains the lyase class I family, histidine ammonia-lyase and phenylalanine ammonia-lyase, which catalyze similar beta-elimination reactions. Lyase class I_like superfamily of enzymes that catalyze beta-elimination reactions and are active as homotetramers. The four active sites of the homotetrameric enzyme are each formed by residues from three different subunits. This superfamily contains the lyase class I family, histidine ammonia-lyase and phenylalanine ammonia-lyase. The lyase class I family comprises proteins similar to class II fumarase, aspartase, adenylosuccinate lyase, argininosuccinate lyase, and 3-carboxy-cis, cis-muconate lactonizing enzyme which, for the most part catalyze similar beta-elimination reactions in which a C-N or C-O bond is cleaved with the release of fumarate as one of the products. Histidine or phenylalanine ammonia-lyase catalyze a beta-elimination of ammonia from histidine and phenylalanine, respective
Probab=100.00 E-value=1e-35 Score=280.70 Aligned_cols=165 Identities=41% Similarity=0.520 Sum_probs=152.9
Q ss_pred cccCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcceecccCCCCCcCCChhHHHHHHHHHHHHH
Q 014483 91 DHVNRSQSSNDTFPTVMHIAAAMETNSRLIPNLKVLHNSLHSKSVEFKDIVKIGRTHTQDATPLTLGQEFSGYTTQVKYG 170 (423)
Q Consensus 91 ~~v~~g~S~nDi~~Ta~~l~~~~~~~~~l~~~l~~l~~~L~~~A~~~~~~~m~grTh~Q~A~P~T~G~~~a~~~~~l~r~ 170 (423)
.++|+|+||||+.+|+.+++.+. ++..+...+..+..++..++++|++++||||||+|+|+|+|||||+++|.+.|.|+
T Consensus 35 ~~~h~g~s~~d~~~t~~~~~~~~-~l~~l~~~l~~~~~~l~~~a~~~~~~~~~~~th~q~A~p~t~g~~~~~~~~~l~~~ 113 (231)
T cd01594 35 ALVHKGRSSNDIGTTALRLALRD-ALDDLLPLLKALIDALALKAEAHKGTVMPGRTHLQDAQPVTLGYELRAWAQVLGRD 113 (231)
T ss_pred CCCCCCCCCchHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhcCCEeecccccccCccccHHHHHHHHHHHHHHH
Confidence 47778999999999999988865 56799999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhhhhhcccccccccCCCCCCCcchHHHHHHHHHHcCCCCCcCCchhHHhhhchHHHHHHHHHHHHHHHHHHH
Q 014483 171 IDRVICCLPRMYQLAQGGTAVGTGLNTKKGFDVKIASAVAEETSLPFVTAENKFEALAAHDAFVETSGALNTVAASLMKI 250 (423)
Q Consensus 171 ~~rL~~~~~r~~~~~lGg~A~Gt~~~~~~~~~~~~~~~la~~LGl~~~~~~n~~da~~~rd~~~e~~~~l~~~~~~L~ri 250 (423)
++||..+ +++++.+.++.++++|+||
T Consensus 114 ~~rL~~~------------------------------------------------------~~~~~~~~l~~~~~~l~r~ 139 (231)
T cd01594 114 LERLEEA------------------------------------------------------AVAEALDALALAAAHLSKI 139 (231)
T ss_pred HHHHHHH------------------------------------------------------HHHHHHHHHHHHHHHHHHH
Confidence 9999988 8899999999999999999
Q ss_pred HHHHHHhcCCCCCcceeEecCC--CCCCCCCCCCCCChhHHHHHHHHHHHhhhhhHHHhhhhcCc
Q 014483 251 ANDVRLLGSGPRCGLGELILPE--NEPGSSIMPGKVNPTQCEALTMVCAQVIGNHVAITVGGSNG 313 (423)
Q Consensus 251 a~Dl~~~~s~~r~e~gev~~~~--~~~gSS~MPqKrNP~~~E~i~~~a~~~~g~~~~~~~~~~~~ 313 (423)
|+|+++|++. |++++.+|+ .++|||+||||+||+.+|.+++++..+.|....+.....++
T Consensus 140 a~d~~~~~~~---~~~~~~~~~~~~~~gSS~mp~k~Np~~~e~~~~~~~~~~~~~~~~~~~~~~~ 201 (231)
T cd01594 140 AEDLRLLLSG---EFGELGEPFLPGQPGSSIMPQKVNPVAAELVRGLAGLVIGNLVAVLTALKGG 201 (231)
T ss_pred HHHHHHHcCC---CCCeeeCccCCCCCCCcCCCCCCCCHHHHHHHHHHHHHHhhHHHHHHHHhcc
Confidence 9999999975 578888876 48899999999999999999999999999988887765544
No 47
>PRK08937 adenylosuccinate lyase; Provisional
Probab=99.97 E-value=1.7e-30 Score=242.97 Aligned_cols=178 Identities=26% Similarity=0.257 Sum_probs=151.4
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCcceeEecCC--CCCCCCCCCCCCChhHHHHHHHHHHHhhhhhHHHhhhhcCcccc
Q 014483 239 ALNTVAASLMKIANDVRLLGSGPRCGLGELILPE--NEPGSSIMPGKVNPTQCEALTMVCAQVIGNHVAITVGGSNGHFE 316 (423)
Q Consensus 239 ~l~~~~~~L~ria~Dl~~~~s~~r~e~gev~~~~--~~~gSS~MPqKrNP~~~E~i~~~a~~~~g~~~~~~~~~~~~~~e 316 (423)
+++.++++|+|||+|+++|+| +||||+.+|. +++|||||||||||+.+|.++++++++.|+..+++... .++++
T Consensus 22 ~l~~i~~~l~ria~Dl~~~~s---~e~gei~~~~~~~~~gSSiMP~K~NP~~~E~i~~~a~~~~g~~~~~~~~~-~~~~e 97 (216)
T PRK08937 22 VLALIATSLEKFANEIRLLQR---SEIREVEEPFAKGQKGSSAMPHKRNPIGSERITGLARVLRSYLVTALENV-PLWHE 97 (216)
T ss_pred HHHHHHHHHHHHHHHHHHHhc---cccceeecccccCCCCCccCCCccCcHHHHHHHHHHHHHHHHHHHHHHHh-HHHhc
Confidence 999999999999999999996 6999999994 58999999999999999999999999999998888755 67889
Q ss_pred cccchhhhHhhhhhHHHHHHHHHHHHHHHhhhCceeCHHHHHHHHHhhhhHH--Hh----hcc-cccHHHHHH----HHH
Q 014483 317 LNVFKPMIASGLLHSLRLLGDASASFEKNCVRGIQANRERISKLLHESLMLV--TS----LNP-KIGYDNAAA----VAK 385 (423)
Q Consensus 317 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~l~v~~~rm~~~l~~~~~~~--~~----la~-~~g~~~a~~----~~~ 385 (423)
++...|..+|..++.+......++..+..++++++||++||++|+..++.+. +. |++ .+|+++||+ +++
T Consensus 98 rd~~~~~~~~~~l~~~~~~~~~~l~~~~~~l~~l~v~~~rm~~~~~~~~~~~~a~~l~~~L~~~g~~~~~Ah~~v~~~~~ 177 (216)
T PRK08937 98 RDLSHSSAERIALPDAFLALDYILNRFVNILENLVVFPENIERNLDKTLGFIATERVLLELVEKGMGREEAHELIREKAM 177 (216)
T ss_pred cCCchhHHHhhHHHHHHHHHHHHHHHHHHHHccCEECHHHHHHHHHHhcChHHHHHHHHHHHHcCCCHHHHHHHHHHHHH
Confidence 9988888888767766666666666667999999999999999999854443 22 333 478888876 445
Q ss_pred HHHHcCCCHHHHHHHcC----CCCHHHHhhccCcccccC
Q 014483 386 KAHKEGTTLKDAALKLG----VLNSEEFDNLVVPEKMIG 420 (423)
Q Consensus 386 ~a~~~g~~l~e~~~~~~----~l~~~~l~~~~dp~~~~g 420 (423)
.+.++|+++.+++.++. .+++++++.++||++|+|
T Consensus 178 ~~~~~g~~~~~~~~~~~~~~~~l~~~~l~~~ldp~~~vg 216 (216)
T PRK08937 178 EAWKNQKDLRELLEADERFTKQLTKEELDELFDPEAFVG 216 (216)
T ss_pred HHHHhCCCHHHHHHhChHhHhcCCHHHHHHHhCHHhhcC
Confidence 67788999999988764 789999999999999997
No 48
>PF10415 FumaraseC_C: Fumarase C C-terminus; InterPro: IPR018951 Fumarase C catalyses the stereo-specific interconversion of fumarate to L-malate as part of the Krebs cycle. The full-length protein forms a tetramer with visible globular shape. FumaraseC_C is the C-terminal 65 residues referred to as domain 3. The core of the molecule consists of a bundle of 20 alpha-helices from the five-helix bundle of domain 2. The projections from the core of the tetramer are generated from domains 1 and 3 of each subunit []. This entry does not appear to be part of either the active site or the activation site but is helical in structure forming a little bundle. ; GO: 0016829 lyase activity, 0006099 tricarboxylic acid cycle; PDB: 3RRP_A 3OCE_D 3OCF_D 3E04_B 3GTD_A 3R6V_F 3R6Q_F 1J3U_B 1FUR_A 1YFE_A ....
Probab=98.68 E-value=1.6e-08 Score=73.10 Aligned_cols=55 Identities=47% Similarity=0.820 Sum_probs=48.0
Q ss_pred HHHhhcccccHHHHHHHHHHHHHcCCCHHHHHHHcCCCCHHHHhhccCcccccCC
Q 014483 367 LVTSLNPKIGYDNAAAVAKKAHKEGTTLKDAALKLGVLNSEEFDNLVVPEKMIGP 421 (423)
Q Consensus 367 ~~~~la~~~g~~~a~~~~~~a~~~g~~l~e~~~~~~~l~~~~l~~~~dp~~~~g~ 421 (423)
++|.|++.+||+.|.+++++|..+|++++|++.+.+.+++++++++|||.+.+++
T Consensus 1 laTaL~p~iGYe~aa~iAk~A~~~g~svre~v~~~g~lt~ee~d~ll~p~~mt~P 55 (55)
T PF10415_consen 1 LATALNPYIGYEKAAEIAKEALAEGRSVREVVLEEGLLTEEELDELLDPERMTNP 55 (55)
T ss_dssp GGGGGHHHHHHHHHHHHHHHHHHHT--HHHHHHHTTSS-HHHHHHHTSHHHHTT-
T ss_pred CeeeccchhccHHHHHHHHHHHHcCCCHHHHHHHcCCCCHHHHHHHcCHHHcCCc
Confidence 3678999999999999999999999999999999999999999999999988764
No 49
>PF10397 ADSL_C: Adenylosuccinate lyase C-terminus; InterPro: IPR019468 Adenylosuccinate lyase catalyses two steps in the synthesis of purine nucleotides: the conversion of succinylaminoimidazole-carboxamide ribotide into aminoimidazole-carboxamide ribotide (the fifth step of de novo IMP biosynthesis); the formation of adenosine monophosphate (AMP) from adenylosuccinate (the final step in the synthesis of AMP from IMP) []. This entry represents the C-terminal, seven alpha-helical, domain of adenylosuccinate lyase [].; PDB: 1YIS_A 1C3U_B 1C3C_A 3C8T_A 2PFM_B 1RE5_D 1Q5N_A 2VD6_D 2J91_B 2X75_A.
Probab=98.18 E-value=2e-06 Score=67.63 Aligned_cols=56 Identities=27% Similarity=0.474 Sum_probs=44.6
Q ss_pred HHHhhccc-ccHHHHHHHH----HHHHHcCCCHHHHHHHc----CCCCHHHHhhccCcccccCCC
Q 014483 367 LVTSLNPK-IGYDNAAAVA----KKAHKEGTTLKDAALKL----GVLNSEEFDNLVVPEKMIGPS 422 (423)
Q Consensus 367 ~~~~la~~-~g~~~a~~~~----~~a~~~g~~l~e~~~~~----~~l~~~~l~~~~dp~~~~g~~ 422 (423)
+++.|+++ +|+++||+++ ..+.++|.+|+|++.++ +.+++++|+++|||..|+|..
T Consensus 9 v~~~L~~~G~gR~~Ah~lv~~~a~~a~~~~~~l~e~l~~d~~i~~~ls~~el~~l~dp~~ylg~~ 73 (81)
T PF10397_consen 9 VMLALAEKGLGRQEAHELVQEAAMEAWENGRDLREVLLADPEIAAYLSEEELEELFDPESYLGNA 73 (81)
T ss_dssp HHHHHHHTTH-HHHHHHHHHHHHHHHHHTTS-HHHHHCTTHHHHTTSHHHHHHHHT-GGGGCTTH
T ss_pred HHHHHHHHccCHHHHHHHHHHHHHHHHHHCCCHHHHHHCCHHHHhHCCHHHHHhhcCHHHHHhhH
Confidence 44567777 9999998655 57788999999999876 589999999999999999963
No 50
>PF14698 ASL_C2: Argininosuccinate lyase C-terminal; PDB: 1XWO_A 2E9F_A 1TJW_C 1TJU_A 1DCN_B 1K7W_B 1HY1_C 1TJV_B 1AUW_A 1U15_B ....
Probab=96.39 E-value=0.0014 Score=49.92 Aligned_cols=54 Identities=22% Similarity=0.324 Sum_probs=36.6
Q ss_pred hHHHhhccc-----ccHHHHHH----HHHHHHHcCCCHHHHHHH-----cCCCCHHHHhhccCcccccC
Q 014483 366 MLVTSLNPK-----IGYDNAAA----VAKKAHKEGTTLKDAALK-----LGVLNSEEFDNLVVPEKMIG 420 (423)
Q Consensus 366 ~~~~~la~~-----~g~~~a~~----~~~~a~~~g~~l~e~~~~-----~~~l~~~~l~~~~dp~~~~g 420 (423)
+++|+||+. ++|++||+ +|+.+.++|+++.++..+ .+.++ +++.+++||+++|.
T Consensus 2 ~~ATdlAD~LVr~GipFR~AH~iVg~~V~~a~~~~~~l~~l~~~~~~~~~~~~~-~~~~~~l~~~~~V~ 69 (70)
T PF14698_consen 2 STATDLADYLVRKGIPFREAHHIVGRLVRLAEEEGKPLSELTLEELQEISPEFE-EDVREALDPEASVE 69 (70)
T ss_dssp GGHHHHHHHHHHTTS-HHHHHHHHHHHHHHHHHTTS-GGGS-HHHHHHH-TT---GGGGGGSSHHHHHT
T ss_pred ccHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHcCCChhhCCHHHHHHHhHHhH-HHHHHHCCHHHHhc
Confidence 456777654 68888885 667888899998776543 24665 88999999998875
No 51
>PF08328 ASL_C: Adenylosuccinate lyase C-terminal; InterPro: IPR013539 This domain is found at the C terminus of adenylosuccinate lyase(ASL; PurB in Escherichia coli). It has been identified in bacteria, eukaryotes and archaea and is found together with the lyase domain IPR000362 from INTERPRO. ASL catalyses the cleavage of succinylaminoimidazole carboxamide ribotide to aminoimidazole carboxamide ribotide and fumarate and the cleavage of adenylosuccinate to adenylate and fumarate []. ; GO: 0004018 N6-(1,2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity, 0006188 IMP biosynthetic process; PDB: 2HVG_A 2QGA_C 2PTS_A 2PTR_A 2PTQ_B 3BHG_A 3GZH_A.
Probab=96.38 E-value=0.018 Score=47.56 Aligned_cols=103 Identities=15% Similarity=0.161 Sum_probs=56.9
Q ss_pred cccccchhhhHhhhhhHHHHHHHHHHHHHHHhhhCceeCHHHHHHHHHhhhhHHHh----hcccccHHHHHHHHHHHHHc
Q 014483 315 FELNVFKPMIASGLLHSLRLLGDASASFEKNCVRGIQANRERISKLLHESLMLVTS----LNPKIGYDNAAAVAKKAHKE 390 (423)
Q Consensus 315 ~e~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~l~v~~~rm~~~l~~~~~~~~~----la~~~g~~~a~~~~~~a~~~ 390 (423)
++++...+.+.+++=-.+....-+...+. +-++.|.||+++|.++++.+|....+ +.++.|++.+||..+.. ..
T Consensus 3 ~QRDLtDSTvlRNiGva~~~sliA~~s~l-kGl~Kl~vn~~~l~~dL~~nWeVlaEpIQTvmRr~g~~~pYE~LK~l-TR 80 (115)
T PF08328_consen 3 WQRDLTDSTVLRNIGVAFGHSLIAYKSLL-KGLGKLEVNEERLAEDLDENWEVLAEPIQTVMRRYGIPNPYEKLKEL-TR 80 (115)
T ss_dssp TTB-THHHHHHTTHHHHHHHHHHHHHHHH-HHHHTEEE-HHHHHHHHCT-GGGGHHHHHHHHHHTT-SSHHHHHHHH-HT
T ss_pred ccccchHHHHHHhhhHHHHHHHHHHHHHH-HHHhcccCCHHHHHHHHHHCHHHHHHHHHHHHHHcCCCCHHHHHHHH-Hc
Confidence 45666665544444333333333344443 45788999999999999999987543 45678999999988764 44
Q ss_pred CCCHHH-HHHH---cCCCCHHHHhhc--cCccccc
Q 014483 391 GTTLKD-AALK---LGVLNSEEFDNL--VVPEKMI 419 (423)
Q Consensus 391 g~~l~e-~~~~---~~~l~~~~l~~~--~dp~~~~ 419 (423)
|+.... .+.+ .-.++++.-+++ +.|.+|+
T Consensus 81 g~~it~~~l~~fI~~L~ip~~~k~~L~~ltP~~Y~ 115 (115)
T PF08328_consen 81 GKKITKEDLREFIESLDIPEEAKARLLALTPATYI 115 (115)
T ss_dssp TS---HHHHHHHHHTSSS-HHHHHHHHH--CCC--
T ss_pred CCCCCHHHHHHHHHhCCCCHHHHHHHHhcCccccC
Confidence 554322 2222 224777765554 6888875
No 52
>KOG2700 consensus Adenylosuccinate lyase [Nucleotide transport and metabolism]
Probab=94.11 E-value=0.3 Score=49.55 Aligned_cols=35 Identities=11% Similarity=-0.036 Sum_probs=27.6
Q ss_pred CCCCCCCCCCCCCChhHHHHHHHHHHHhhhhhHHH
Q 014483 272 ENEPGSSIMPGKVNPTQCEALTMVCAQVIGNHVAI 306 (423)
Q Consensus 272 ~~~~gSS~MPqKrNP~~~E~i~~~a~~~~g~~~~~ 306 (423)
++..|+|+||+|.||+.++..-+.-.+..+...++
T Consensus 325 Ertl~dSa~~rivlP~~Fl~ad~~L~~~~ni~~gl 359 (481)
T KOG2700|consen 325 ERTLDDSANRRIVLPDAFLTADGNLGTLLNILEGL 359 (481)
T ss_pred hcccccccccceechHHHHHHHHHHHHHHHHHhhc
Confidence 45779999999999999999988776655544333
No 53
>PF10925 DUF2680: Protein of unknown function (DUF2680); InterPro: IPR024485 Members in this family of proteins are annotated as YckD however currently no function is known.
Probab=72.21 E-value=16 Score=26.70 Aligned_cols=39 Identities=18% Similarity=0.178 Sum_probs=35.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHcC-CCHHHHHHHHHHHHHHH
Q 014483 3 EPIVRAFGILKKCAAKVNMEYG-LDPAIGKAIMQAAQEVA 41 (423)
Q Consensus 3 ~~~~~~~~~ve~A~a~a~~~~g-ip~~~a~~I~~a~~~i~ 41 (423)
.+|...|+...++..--..+.| |+++.|+.|.+.++.-.
T Consensus 10 ~~l~~qm~e~kK~~idk~Ve~G~iTqeqAd~ik~~id~~~ 49 (59)
T PF10925_consen 10 KALYKQMLELKKQIIDKYVEAGVITQEQADAIKKHIDQRQ 49 (59)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHH
Confidence 3688999999999999999999 99999999999887643
No 54
>PF02022 Integrase_Zn: Integrase Zinc binding domain The structure of the N-terminal zinc binding domain.; InterPro: IPR003308 Retroviral integrase mediates integration of a DNA copy of the viral genome into the host chromosome. Integrase is composed of three domains: an N-terminal zinc binding domain, a central catalytic core and a C-terminal DNA-binding domain [, ]. Often found as part of the POL polyprotein.; GO: 0008270 zinc ion binding; PDB: 1E0E_A 3F9K_F 1E27_C 1K6Y_B 1WJD_A 1WJB_A 1WJF_A 1WJE_B 3HPG_B 3HPH_C ....
Probab=36.30 E-value=31 Score=23.07 Aligned_cols=22 Identities=23% Similarity=0.409 Sum_probs=15.6
Q ss_pred HHHHH-HcCCCHHHHHHHHHHHH
Q 014483 17 AKVNM-EYGLDPAIGKAIMQAAQ 38 (423)
Q Consensus 17 a~a~~-~~gip~~~a~~I~~a~~ 38 (423)
+.++. +.|||+.+|+.|++.|.
T Consensus 12 ~~~L~~~f~ip~~vAk~IV~~C~ 34 (40)
T PF02022_consen 12 AKALRHKFGIPRLVAKQIVNQCP 34 (40)
T ss_dssp HHHHHHHHT--HHHHHHHHHHSC
T ss_pred HHHHHHHHccCHHHHHHHHHHCH
Confidence 34555 66799999999999874
No 55
>PF05924 SAMP: SAMP Motif; InterPro: IPR009224 This short region is found repeated in the mid region of the adenomatous polyposis proteins (APCs). This motif binds axin [].; GO: 0008013 beta-catenin binding, 0016055 Wnt receptor signaling pathway; PDB: 1EMU_B 2RQU_B.
Probab=33.96 E-value=13 Score=20.99 Aligned_cols=10 Identities=30% Similarity=0.305 Sum_probs=3.7
Q ss_pred CCCCCCCCCC
Q 014483 276 GSSIMPGKVN 285 (423)
Q Consensus 276 gSS~MPqKrN 285 (423)
-+|+||.|+-
T Consensus 10 I~sAmPk~~~ 19 (20)
T PF05924_consen 10 IGSAMPKRRR 19 (20)
T ss_dssp HHCTS-----
T ss_pred HHHhcccccC
Confidence 4688888763
No 56
>CHL00180 rbcR LysR transcriptional regulator; Provisional
Probab=28.53 E-value=2.2e+02 Score=27.22 Aligned_cols=58 Identities=16% Similarity=0.218 Sum_probs=43.6
Q ss_pred hccCcceecccCCCCCcCCChhHHHHHHHHHHHHHHHHHHHHhhhhhhcccccccccCC
Q 014483 136 EFKDIVKIGRTHTQDATPLTLGQEFSGYTTQVKYGIDRVICCLPRMYQLAQGGTAVGTG 194 (423)
Q Consensus 136 ~~~~~~m~grTh~Q~A~P~T~G~~~a~~~~~l~r~~~rL~~~~~r~~~~~lGg~A~Gt~ 194 (423)
+.-++...=||. ..-.||..|..+..++..+.+.++++.+........+-|.=-+|+.
T Consensus 45 ~~lg~~Lf~R~~-r~~~lT~~G~~l~~~a~~ll~~~~~~~~~~~~~~~~~~g~l~ig~~ 102 (305)
T CHL00180 45 KQLNIPLFDRSK-NKASLTEAGELLLRYGNRILALCEETCRALEDLKNLQRGTLIIGAS 102 (305)
T ss_pred HHhCCEEEEecC-CCceECHhHHHHHHHHHHHHHHHHHHHHHHHHhhcccCceEEEEEc
Confidence 455677777874 4579999999999999999999999988877766544443123653
No 57
>PRK12683 transcriptional regulator CysB-like protein; Reviewed
Probab=20.11 E-value=4.3e+02 Score=25.40 Aligned_cols=48 Identities=6% Similarity=-0.029 Sum_probs=38.3
Q ss_pred hccCcceecccCCCCCcCCChhHHHHHHHHHHHHHHHHHHHHhhhhhh
Q 014483 136 EFKDIVKIGRTHTQDATPLTLGQEFSGYTTQVKYGIDRVICCLPRMYQ 183 (423)
Q Consensus 136 ~~~~~~m~grTh~Q~A~P~T~G~~~a~~~~~l~r~~~rL~~~~~r~~~ 183 (423)
+.-++...=||..+--.||..|..+..++..+....+++....+....
T Consensus 42 ~~lg~~Lf~R~~r~~~~lT~~G~~l~~~a~~il~~~~~~~~~~~~~~~ 89 (309)
T PRK12683 42 DELGVEIFIRRGKRLTGLTEPGKELLQIVERMLLDAENLRRLAEQFAD 89 (309)
T ss_pred HHhCCeeEeeCCCCcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 345666777886665579999999999999999999999877766543
Done!